Citrus Sinensis ID: 018699

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-
Protein Sequence
MNKLLKQINSQIMKFEGYHRSNKVYSGKVALSSLNNSSRNKTIEIGGKKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFPWEFYMYRQLDQRISGRERSSFGFAHRIHLYSDYSILVCDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSGPWQDQGLCLVDWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQEKKPWKFQVDTYGLCAIVHMMLHNSYMEIEKKASPDGGLVYLPKLSFKRYWKVELWKSLFTNLLNMSSGNDKEVLQNLQKSFQDYLCSNPQLLKNLKELLAKQRASLCGA
Secondary Structure (PSIPRED)
cHHHHHHccccccccccccccccccccccccccccccccccEEEEccccEEEEEEEEEcccEEEEEEEEEcccccEEEEEEEccccHHHHHHHHHHHHHHHccccccHHHHHHHEEEccEEEEEEEccccccHHHHHHccccccccccHHHHHHHHHHHHHHHHHHHHccccccccccccEEEccccccccccccccccccccccEEEEEccccccccccccccccccccccccccHHHHHHccccccccccccHHHHHHHHHHccccccccccccccccEEcccccccccccHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHcc
Secondary Structure Prediction (SSPRO)
ccHHHHHccccHHcccccccccccccccccccccccccccEEEEccccEEEEEEEEcccccEEEEEEEEEcccccEEEEEEccccccHHHHHHHHHHHHHcHHccccEEEHHHHEEccccEEEEEEEcccccHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHHcccEccccccccEEEccccccccccccccccccccccEEEEEcccEEEEEEcccccEEEEEccccccccHEEEcccccccHHHHHHHHHHHHHHHHccccccccccccccEEEEEccccccccccHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHccc
Coil and Loop (DISEMBL)
MNKLLKQINSQIMKFEgyhrsnkvysGKVALSslnnssrnktieiggkkyqikgcagqggFAKVFKAYVNGDPEDVVALKiqkpafpwefYMYRQLDqrisgrerssfgfahrihlysdYSILVCDylsqgtlqdAINSYVVIGKSMEEVLCIYYTIEMLCILESLhdvgiihgdfkpdnllIRYARdeltvldhdrsgpwqdqglclvdwgrgidlhlfpdnmefegdcrtsgfrciemqekkpwkfqvdtyGLCAIVHMMLHNSYMeiekkaspdgglvylpklsfkRYWKVELWKSLFTNLLNMSSGNDKEVLQNLQKSFQDYLCSNPQLLKNLKELLAKQRASLCGA
Flexible Loop (DISEMBL)
MNKLLKQINSQIMKFEGYHRSNKVYSGKValsslnnssrnktieiggkkyQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFPWEFYMYRQLDQRISGRERSSFGFAHRIHLYSDYSILVCDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTvldhdrsgpwQDQGLCLVDWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQEKKPWKFQVDTYGLCAIVHMMLHNSYMEIEKKASPDGGLVYLPKLSFKRYWKVELWKSLFTNLLNMSSGNDKEVLQNLQKSFQDYLCSNPQLLKNLKELLAKQRASLCGA
Low Complexity Region (SEG)
MNKLLKQINSQIMKFEGYHRSNKVYSGKVALSSLNNSSRNKTIEIGGKKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFPWEFYMYRQLDQRISGRERSSFGFAHRIHLYSDYSILVCDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSGPWQDQGLCLVDWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQEKKPWKFQVDTYGLCAIVHMMLHNSYMEIEKKASPDGGLVYLPKLSFKRYWKVELWKSLFTNLLNMSSGNDKEVLQNLQKSFQDYLCSNPQLLKNLKELLAKQRASLCGA
Disordered region (IsUnstruct)
***********IMKFEGYHRSNKVYSGKV************TIEIGGKKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFPWEFYMYRQLDQRISGRERSSFGFAHRIHLYSDYSILVCDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSGPWQDQGLCLVDWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQEKKPWKFQVDTYGLCAIVHMMLHNSYMEIEKKASPDGGLVYLPKLSFKRYWKVELWKSLFTNLLNMSSGNDKEVLQNLQKSFQDYLCSNPQLLKNLKEL***********
Disordered Region (DISOPRED)
*NKLLK******************************************KYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFPWEFYMYRQLDQRISGRERSSFGFAHRIHLYSDYSILVCDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSGPWQDQGLCLVDWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQEKKPWKFQVDTYGLCAIVHMMLHNSYMEIEKKASPDGGLVYLPKLSFKRYWKVELWKSLFTNLLNMSSGNDKEVLQNLQKSFQDYLCSNPQLLKNLKELLAKQRASLC**
Disordered Region (DISEMBL)
MNKLLKQINSQIMKFEGYHRSNKVYSGKVALSSLNNSSRNKTIEIGGKKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFPWEFYMYRQLDQRISGRERSSFGFAHRIHLYSDYSILVCDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSGPWQDQGLCLVDWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQEKKPWKFQVDTYGLCAIVHMMLHNSYMEIEKKASPDGGLVYLPKLSFKRYWKVELWKSLFTNLLNMSSGNDKEVLQNLQKSFQDYLCSNPQLLKNLKELLAK********
Disordered Region (DISPRO)
MNKLLKQINSQIMKFEGYHRSNKVYSGKVALSSLNNSSRNKTIEIGGKKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFPWEFYMYRQLDQRISGRERSSFGFAHRIHLYSDYSILVCDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSGPWQDQGLCLVDWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQEKKPWKFQVDTYGLCAIVHMMLHNSYMEIEKKASPDGGLVYLPKLSFKRYWKVELWKSLFTNLLNMSSGNDKEVLQNLQKSFQDYLCSNPQLLKNLKELLAKQRAS****
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MNKLLKQINSQIMKFEGYHRSNKVYSGKVALSSLNNSSRNKTIEIGGKKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFPWEFYMYRQLDQRISGRERSSFGFAHRIHLYSDYSILVCDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSGPWQDQGLCLVDWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQEKKPWKFQVDTYGLCAIVHMMLHNSYMEIEKKASPDGGLVYLPKLSFKRYWKVELWKSLFTNLLNMSSGNDKEVLQNLQKSFQDYLCSNPQLLKNLKELLAKQRASLCGA
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	351	2.2.26 [Sep-21-2011]
P41695	1021	Checkpoint serine/threoni	yes	no	0.868	0.298	0.338	2e-44
O43683	1085	Mitotic checkpoint serine	yes	no	0.803	0.259	0.358	4e-43
O08901	1058	Mitotic checkpoint serine	yes	no	0.760	0.252	0.355	8e-42
O94751	1044	Checkpoint serine/threoni	yes	no	0.698	0.234	0.380	1e-41
Q54CV5	1306	Probable inactive serine/	yes	no	0.760	0.204	0.28	9e-22
O60566	1050	Mitotic checkpoint serine	no	no	0.709	0.237	0.262	2e-11
Q9Z1S0	1052	Mitotic checkpoint serine	no	no	0.720	0.240	0.234	8e-10
Q54HD2	2112	Probable serine/threonine	no	no	0.381	0.063	0.270	3e-06
Q63644	1369	Rho-associated protein ki	no	no	0.501	0.128	0.229	4e-06
O14578	2027	Citron Rho-interacting ki	no	no	0.427	0.074	0.244	4e-06

>sp|P41695|BUB1_YEAST Checkpoint serine/threonine-protein kinase BUB1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=BUB1 PE=1 SV=2

 Score =  179 bits (454), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 110/325 (33%), Positives = 175/325 (53%), Gaps = 20/325 (6%)

Query: 3   KLLKQINSQIMKFEGYHRSNKVYSGKVALSSLNNSSRNKT------IEIGGKKYQIKGCA 56
           K L +I+  + ++  ++  N+       L  ++  SRN+        +  G  Y I+G  
Sbjct: 652 KFLSEISPPLFQYNTFYNYNQELKMSSLLKKIHRVSRNENKNPIVDFKKTGDLYCIRGEL 711

Query: 57  GQGGFAKVFKAYVNGDPEDVVALKIQKPAFPWEFYMYRQLDQRISGRE-RSSFGFAHRIH 115
           G+GG+A V+ A        + ALK++KPA  WE+Y+  Q++ R+       S   A  +H
Sbjct: 712 GEGGYATVYLA--ESSQGHLRALKVEKPASVWEYYIMSQVEFRLRKSTILKSIINASALH 769

Query: 116 LYSDYSILVCDYLSQGTLQDAIN---SYVVIGKS-MEEVLCIYYTIEMLCILESLHDVGI 171
           L+ D S LV +Y SQGT+ D IN      + G   M+E LC++ T+E++ +LE +H+VGI
Sbjct: 770 LFLDESYLVLNYASQGTVLDLINLQREKAIDGNGIMDEYLCMFITVELMKVLEKIHEVGI 829

Query: 172 IHGDFKPDNLLIRYARDELTVLDH-DRSGP--WQDQGLCLVDWGRGIDLHLFPDNMEFEG 228
           IHGD KPDN +IR  +    +  H  R+G   W+++G+ L+D+GR  D+ L P   +F+ 
Sbjct: 830 IHGDLKPDNCMIRLEKPGEPLGAHYMRNGEDGWENKGIYLIDFGRSFDMTLLPPGTKFKS 889

Query: 229 DCRTSGFRCIEMQEKKPWKFQVDTYGLCAIVHMMLHNSYMEIEKKASPDGGLVYLPKLSF 288
           + +     C EM+  KPW ++ D YGL  ++H ML   ++E         G   L K  F
Sbjct: 890 NWKADQQDCWEMRAGKPWSYEADYYGLAGVIHSMLFGKFIET---IQLQNGRCKL-KNPF 945

Query: 289 KRYWKVELWKSLFTNLLNMSSGNDK 313
           KRYWK E+W  +F  LLN    +++
Sbjct: 946 KRYWKKEIWGVIFDLLLNSGQASNQ 970

Involved in cell cycle checkpoint enforcement. The formation of a MAD1-BUB1-BUB3 complex seems to be required for the spindle checkpoint mechanism. Catalyzes the phosphorylation of BUB3 and its autophosphorylation. Associates with centromere (CEN) DNA via interaction with SKP1. The association with SKP1 is required for the mitotic delay induced by kinetochore tension defects, but not for the arrest induced by spindle depolymerization or kinetochore assembly defects.
Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (taxid: 559292)
EC: 2EC: .EC: 7EC: .EC: 1EC: 1EC: .EC: 1

>sp|O43683|BUB1_HUMAN Mitotic checkpoint serine/threonine-protein kinase BUB1 OS=Homo sapiens GN=BUB1 PE=1 SV=1

 Score =  175 bits (444), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 109/304 (35%), Positives = 163/304 (53%), Gaps = 22/304 (7%)

Query: 43   IEIGGKKYQIKGCAGQGGFAKVFKAYVNGDPEDV-----VALKIQKPAFPWEFYMYRQLD 97
             ++G K   +    G+G FA+V++A   GD  D        LK+QKPA PWEFY+  QL 
Sbjct: 780  FQLGSKLVYVHHLLGEGAFAQVYEA-TQGDLNDAKNKQKFVLKVQKPANPWEFYIGTQLM 838

Query: 98   QRISGRERSSFGFAHRIHLYSDYSILVCDYLSQGTLQDAINSYV-VIGKSMEEVLCIYYT 156
            +R+    +  F   +  HL+ + S+LV +  S GTL +AIN Y     K M + L I + 
Sbjct: 839  ERLKPSMQHMFMKFYSAHLFQNGSVLVGELYSYGTLLNAINLYKNTPEKVMPQGLVISFA 898

Query: 157  IEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSGPWQDQGLCLVDWGRGID 216
            + ML ++E +HD  IIHGD KPDN ++     E    D D S      GL L+D G+ ID
Sbjct: 899  MRMLYMIEQVHDCEIIHGDIKPDNFILGNGFLEQDDED-DLSA-----GLALIDLGQSID 952

Query: 217  LHLFPDNMEFEGDCRTSGFRCIEMQEKKPWKFQVDTYGLCAIVHMMLHNSYMEIEKKASP 276
            + LFP    F   C TSGF+C+EM   KPW +Q+D +G+ A V+ ML  +YM+++     
Sbjct: 953  MKLFPKGTIFTAKCETSGFQCVEMLSNKPWNYQIDYFGVAATVYCMLFGTYMKVKN---- 1008

Query: 277  DGGLVYLPKLSFKRYWKVELWKSLFTNLLNMSSGNDKEVL----QNLQKSFQDYLCSNPQ 332
            +GG    P+  F+R   +++W   F  +LN+   +    L    Q L+K FQ +  +  +
Sbjct: 1009 EGGECK-PEGLFRRLPHLDMWNEFFHVMLNIPDCHHLPSLDLLRQKLKKVFQQHYTNKIR 1067

Query: 333  LLKN 336
             L+N
Sbjct: 1068 ALRN 1071

Serine/threonine-protein kinase that performs 2 crucial functions during mitosis: it is essential for spindle-assembly checkpoint signaling and for correct chromosome alignment. Has a key role in the assembly of checkpoint proteins at the kinetochore, being required for the subsequent localization of CENPF, BUB1B, CENPE and MAD2L1. Required for the kinetochore localization of PLK1. Plays an important role in defining SGOL1 localization and thereby affects sister chromatid cohesion. Acts as a substrate for anaphase-promoting complex or cyclosome (APC/C) in complex with its activator CDH1 (APC/C-Cdh1). Necessary for ensuring proper chromosome segregation and binding to BUB3 is essential for this function. Can regulate chromosome segregation in a kinetochore-independent manner. Can phosphorylate BUB3. The BUB1-BUB3 complex plays a role in the inhibition of APC/C when spindle-assembly checkpoint is activated and inhibits the ubiquitin ligase activity of APC/C by phosphorylating its activator CDC20. This complex can also phosphorylate MAD1L1. Kinase activity is essential for inhibition of APC/CCDC20 and for chromosome alignment but does not play a major role in the spindle-assembly checkpoint activity. Mediates cell death in response to chromosome missegregation and acts to suppress spontaneous tumorigenesis.

Homo sapiens (taxid: 9606)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|O08901|BUB1_MOUSE Mitotic checkpoint serine/threonine-protein kinase BUB1 OS=Mus musculus GN=Bub1 PE=2 SV=1

 Score =  171 bits (433), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 103/290 (35%), Positives = 159/290 (54%), Gaps = 23/290 (7%)

Query: 57   GQGGFAKVFKAYVNGD-----PEDVVALKIQKPAFPWEFYMYRQLDQRISGRERSSFGFA 111
            G+G FA+VF+A ++GD      E    LK+Q+PA  WEFY+  QL +R+       F   
Sbjct: 768  GEGAFAQVFEA-IHGDVRNAKSEQKCILKVQRPANSWEFYIGMQLMERLKPEVHHMFIKF 826

Query: 112  HRIHLYSDYSILVCDYLSQGTLQDAINSYVVIG-KSMEEVLCIYYTIEMLCILESLHDVG 170
            +  HL+ + SILV +  S GTL + IN Y     K M + L + + I ML ++E +H   
Sbjct: 827  YSAHLFKNGSILVGELYSYGTLLNVINLYKNTSEKVMPQALVLTFAIRMLYMVEQVHSCE 886

Query: 171  IIHGDFKPDNLLIRYARDELTVLDHDRSGPWQDQGLCLVDWGRGIDLHLFPDNMEFEGDC 230
            IIHGD KPDN ++ +    L   D D +      GL L+D G+ ID+ LFP    F G C
Sbjct: 887  IIHGDIKPDNFILGHRF--LEQADEDLA-----TGLALIDLGQSIDMKLFPKGTVFTGKC 939

Query: 231  RTSGFRCIEMQEKKPWKFQVDTYGLCAIVHMMLHNSYMEIEKKASPDGGLVYLPKLSFKR 290
             TSGF+C EM   KPW +Q+D +G+ A ++ ML  SYM+++ +     G V+ P+  F+R
Sbjct: 940  ETSGFQCPEMLSNKPWNYQIDYFGVAATIYCMLFGSYMKVKNE-----GGVWKPEGLFRR 994

Query: 291  YWKVELWKSLFTNLLNMSSGNDKEVL----QNLQKSFQDYLCSNPQLLKN 336
               +++W+  F  +LN+   ++   L    QN++K  +    +  + L+N
Sbjct: 995  LPHLDMWEEFFHIMLNIPDCHNLPSLDFLRQNMKKLLEQQYSNKIKTLRN 1044

Serine/threonine-protein kinase that performs 2 crucial functions during mitosis: it is essential for spindle-assembly checkpoint signaling and for correct chromosome alignment. Has a key role in the assembly of checkpoint proteins at the kinetochore, being required for the subsequent localization of CENPF, BUB1B, CENPE and MAD2L1. Required for the kinetochore localization of PLK1. Plays an important role in defining SGOL1 localization and thereby affects sister chromatid cohesion. Acts as a substrate for anaphase-promoting complex or cyclosome (APC/C) in complex with its activator CDH1 (APC/C-Cdh1). Necessary for ensuring proper chromosome segregation and binding to BUB3 is essential for this function. Can regulate chromosome segregation in a kinetochore-independent manner. Can phosphorylate BUB3. The BUB1-BUB3 complex plays a role in the inhibition of APC/C when spindle-assembly checkpoint is activated and inhibits the ubiquitin ligase activity of APC/C by phosphorylating its activator CDC20. This complex can also phosphorylate MAD1L1. Kinase activity is essential for inhibition of APC/CCDC20 and for chromosome alignment but does not play a major role in the spindle-assembly checkpoint activity. Mediates cell death in response to chromosome missegregation and acts to suppress spontaneous tumorigenesis. Essential during early and later stages of embryonic development. Necessary for postimplantation embryogenesis and proliferation of primary embryonic fibroblasts and plays an important role in spermatogenesis and fertility.

Mus musculus (taxid: 10090)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|O94751|BUB1_SCHPO Checkpoint serine/threonine-protein kinase bub1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=bub1 PE=1 SV=1

 Score =  170 bits (431), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 105/276 (38%), Positives = 151/276 (54%), Gaps = 31/276 (11%)

Query: 57  GQGGFAKVF--KAYVNGDPEDV------------VALKIQKPAFPWEFYMYRQLDQRISG 102
           GQG FA V+  K+ +  +  DV             ALKI+ P   +EFY+ RQ   R+ G
Sbjct: 725 GQGAFAPVYLVKSKIETENGDVSQGGAENNESKLFALKIETPPSCFEFYLTRQAMTRLKG 784

Query: 103 -RERSSFGFAHRIHLYSDYSILVCDYLSQGTLQDAINSY---VVIGKSMEEVLCIYYTIE 158
            RE +S    H++H++ D S L+ DY  QG++ D +NS          M+E+L ++++IE
Sbjct: 785 LRETNSILPVHQLHMFHDTSHLLMDYRPQGSILDLVNSMHNSTFSSSGMDEILVVFFSIE 844

Query: 159 MLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRS---GP-----WQDQGLCLVD 210
            L I+E+LH   IIHGD K DN L+R      TV D + S    P     W  +G+ L+D
Sbjct: 845 FLRIIEALHTHKIIHGDLKADNALLRLE----TVADSEWSPIYSPEGLYGWSFKGIYLID 900

Query: 211 WGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQEKKPWKFQVDTYGLCAIVHMMLHNSYMEI 270
           +GRGIDL LF + ++F  D  T    CIEM+E +PW +Q+D +GL AI++ ML   Y+E 
Sbjct: 901 FGRGIDLSLFEEKVKFIADWDTDLQDCIEMREGRPWTYQIDYHGLAAIIYTMLFGQYIET 960

Query: 271 EKKASPDGGLVYLPKLSFKRYWKVELWKSLFTNLLN 306
             +   +G    +     KRYW  +LW  LF  LLN
Sbjct: 961 RIEVI-NGQRRQVLTQRMKRYWNQDLWHRLFDLLLN 995

Involved in cell cycle checkpoint enforcement. Acts to stabilize the spindle during mitosis. Required for the correct localization of bub3 and mad3 to the kinetochore. Appears to have a role in chromosome segregation. Catalyzes the phosphorylation of bub3.

Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q54CV5|BUB1_DICDI Probable inactive serine/threonine-protein kinase bub1 OS=Dictyostelium discoideum GN=bub1 PE=3 SV=1

 Score =  104 bits (260), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 84/300 (28%), Positives = 140/300 (46%), Gaps = 33/300 (11%)

Query: 77   VALKIQKPAFPWEFYMYRQLDQRISGRE----RSSFGFAHRIHLYSDYSILVCDY-LSQG 131
            ++ K+Q P   WEFY+  Q+ QR+  R      S F   H ++ Y+D SI++ D+ + QG
Sbjct: 1004 LSCKVQDPPSIWEFYIGNQIHQRLQERSLTISNSKFPTIHSLYYYTDKSIMLMDHTIDQG 1063

Query: 132  TLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNL--LIRYARDE 189
            TL D ++S    G  MEE L +++ IE+L ++E LH VGIIHG+   +NL  L     D 
Sbjct: 1064 TLDDVVSS--TNGVPMEEPLAMFHCIELLKMIEDLHLVGIIHGNICANNLHFLFGQTSDW 1121

Query: 190  LTVLDHDRSGPWQDQGLCLVDWGRGIDLHLFPDNMEFEGDCRT----SGFRCIEMQEKKP 245
                  +  G W+ +G  L D+ R ID  ++  +  ++         +    +++ +   
Sbjct: 1122 PDWTAGECKGAWKSKGFTLTDFSRSIDTTIYSQDARYQSPIELLPIGTPLEWLKINQSST 1181

Query: 246  ----WKFQVDTYGLCAIVHMMLHNSYMEIEKKASPDGGLV------YLPKLSFKRYWKVE 295
                W + +D  G+C ++  +L     E++   S   G +       + K SF       
Sbjct: 1182 TNVGWSYNLDYLGICKVMFHILTCGKEELKLSLSQQTGKLEIINQSIIQKDSFSEL--DT 1239

Query: 296  LWKSLFTNLLNMSSGNDKE-------VLQNLQKSFQDYLCSNPQLLKNLKELLAKQRASL 348
            LW    T LLN +  N  +       +L+  +  F++YL SNP +   +K LL  Q   L
Sbjct: 1240 LWLPFLTTLLNHNGENGNQQTTTTTYILKQQRNLFENYLQSNP-VKSKIKSLLRIQNIKL 1298

Dictyostelium discoideum (taxid: 44689)

>sp|O60566|BUB1B_HUMAN Mitotic checkpoint serine/threonine-protein kinase BUB1 beta OS=Homo sapiens GN=BUB1B PE=1 SV=3

 Score = 70.5 bits (171), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 76/289 (26%), Positives = 123/289 (42%), Gaps = 40/289 (13%)

Query: 41   KTIEIGGKKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFPWEFYMYRQLDQRI 100
            K IE+G + Y IK         K+F        E +  +K+     PW+FY+  +L +R+
Sbjct: 757  KEIELGNEDYCIKREYLICEDYKLFWVAPRNSAE-LTVIKVSSQPVPWDFYINLKLKERL 815

Query: 101  SGRERSSFGFAHRIHLYSDYSILVCDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEML 160
            +      F      + Y D  I+   Y++  TLQD +     I   +  VL IY    +L
Sbjct: 816  N----EDFDHFCSCYQYQDGCIVWHQYINCFTLQDLLQHSEYITHEIT-VLIIY---NLL 867

Query: 161  CILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSGPW----QDQGLCLVDWGRGID 216
             I+E LH   I+HGD  P  L++R          HD   P+     +Q L +VD+   +D
Sbjct: 868  TIVEMLHKAEIVHGDLSPRCLILRNR-------IHD---PYDCNKNNQALKIVDFSYSVD 917

Query: 217  LHLFPDNMEFEGDCRTSGFRCIEMQEKK------PWKFQVDTYGLCAIVHMMLHNSYMEI 270
            L +  D          SGFR +++ E +         +QVD +G+  + H++L   ++++
Sbjct: 918  LRVQLDVFTL------SGFRTVQILEGQKILANCSSPYQVDLFGIADLAHLLLFKEHLQV 971

Query: 271  EKKASPDGGLVYLPKLSFKRYWKVELWKSLFTNLLNMSSGNDKEVLQNL 319
                  DG    L + +       ELW   F  +LN +      VL  L
Sbjct: 972  FW----DGSFWKLSQ-NISELKDGELWNKFFVRILNANDEATVSVLGEL 1015

Essential component of the mitotic checkpoint. Required for normal mitosis progression. The mitotic checkpoint delays anaphase until all chromosomes are properly attached to the mitotic spindle. One of its checkpoint functions is to inhibit the activity of the anaphase-promoting complex/cyclosome (APC/C) by blocking the binding of CDC20 to APC/C, independently of its kinase activity. The other is to monitor kinetochore activities that depend on the kinetochore motor CENPE. Required for kinetochore localization of CENPE. Negatively regulates PLK1 activity in interphase cells and suppresses centrosome amplification. Also implicated in triggering apoptosis in polyploid cells that exit aberrantly from mitotic arrest. May play a role for tumor suppression.

Homo sapiens (taxid: 9606)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q9Z1S0|BUB1B_MOUSE Mitotic checkpoint serine/threonine-protein kinase BUB1 beta OS=Mus musculus GN=Bub1b PE=1 SV=2

 Score = 65.1 bits (157), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 67/286 (23%), Positives = 120/286 (41%), Gaps = 33/286 (11%)

Query: 41   KTIEIGGKKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFPWEFYMYRQLDQRI 100
            K IE+G + Y IK         ++F        E +  +K      PW+FY+  +L +R+
Sbjct: 746  KEIELGPEDYVIKQEHLTCDDYRLFWVAPRSSAE-LTMIKASSQPIPWDFYINLKLKERL 804

Query: 101  SGRERSSFGFAHRIHLYSDYSILVCDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEML 160
            +      +        Y D  ++   Y++  TLQ+ +     +  + E ++ I Y   +L
Sbjct: 805  N----EDYDQLCSCCQYQDGHVVWYQYINCSTLQNLLQHSEFV--THEIIVLIIYN--LL 856

Query: 161  CILESLHDVGIIHGDFKPDNLLIR-YARDELTVLDHDRSGPWQDQGLCLVDWGRGIDLHL 219
             I+E LH   I+HGD  P +L++R    D    ++ D      D  + ++D+   +DL +
Sbjct: 857  TIVEKLHRAEIVHGDLSPRSLILRNRIHDPYDYVNKD------DHAVRIMDFSYSVDLRV 910

Query: 220  FPDNMEFEGDCRTSGFRCIEMQEKK------PWKFQVDTYGLCAIVHMMLHNSYMEIEKK 273
              D   +      SGFR  ++ E +         + VD  G+  + H++L   ++ +   
Sbjct: 911  QLDAFAY------SGFRTAQILEGQKILANCSSPYHVDLLGIADLAHLLLFKEHLHVFWD 964

Query: 274  ASPDGGLVYLPKLSFKRYWKVELWKSLFTNLLNMSSGNDKEVLQNL 319
                 GL++    S       ELW   F  +LN S  +   VL  L
Sbjct: 965  -----GLLWKLSQSTSELKDSELWNKFFVRILNASDKSTVSVLGEL 1005

Essential component of the mitotic checkpoint. Required for normal mitosis progression and tumor suppression. The mitotic checkpoint delays anaphase until all chromosomes are properly attached to the mitotic spindle. One of its checkpoint functions is to inhibit the activity of the anaphase-promoting complex/cyclosome (APC/C) by blocking the binding of CDC20 to APC/C, independently of its kinase activity. The other is to monitor kinetochore activities that depend on the kinetochore motor CENPE. Required for kinetochore localization of CENPE. Negatively regulates PLK1 activity in interphase cells and suppresses centrosome amplification. Also implicated in triggering apoptosis in polyploid cells that exit aberrantly from mitotic arrest. Essential for tumor suppression. May play a role in regulating aging and fertility.

Mus musculus (taxid: 10090)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q54HD2|NDRD_DICDI Probable serine/threonine-protein kinase ndrD OS=Dictyostelium discoideum GN=ndrD PE=3 SV=1

 Score = 52.8 bits (125), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 43/159 (27%), Positives = 72/159 (45%), Gaps = 25/159 (15%)

Query: 39   RNKTIEIGGKKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFPWEFYMYRQLDQ 98
            R+K  ++G   +Q     G+GGF KV+ A    D  ++V LK+ + +       Y + +Q
Sbjct: 1544 RSKRSKLGPSDFQKLTAIGKGGFGKVYLAR-KKDSNEIVTLKVIRKS------TYHRANQ 1596

Query: 99   RIS-GRERSSFGFAHRIH---------LYS----DYSILVCDYLSQGTLQDAINSYVVIG 144
              S  +E+      H            LYS     Y  L  +Y   G  +  +N+     
Sbjct: 1597 MTSVTKEKEVMMIPHSSKDQSQWITRLLYSFHDSQYLYLAMEYHCGGDFKTLLNNL---- 1652

Query: 145  KSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLI 183
            + +E+ +  +Y  EM+  +ESLH +G IH D KP N ++
Sbjct: 1653 QRLEDDIAPFYMAEMILAVESLHRLGYIHRDLKPSNFVV 1691

Dictyostelium discoideum (taxid: 44689)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q63644|ROCK1_RAT Rho-associated protein kinase 1 OS=Rattus norvegicus GN=Rock1 PE=1 SV=1

 Score = 52.8 bits (125), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 45/196 (22%), Positives = 89/196 (45%), Gaps = 20/196 (10%)

Query: 41  KTIEIGGKKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFPWEFYMYRQLDQRI 100
           + + +  + Y++    G+G F +V +   +     V A+K+       +F M ++ D   
Sbjct: 67  RDLRMKAEDYEVVKVIGRGAFGEV-QLVRHKSTRKVYAMKLLS-----KFEMIKRSDSAF 120

Query: 101 SGRERSSFGFAHR---IHLY-----SDYSILVCDYLSQGTLQDAINSYVVIGKSMEEVLC 152
              ER    FA+    + L+       Y  +V +Y+  G L + +++Y V  K       
Sbjct: 121 FWEERDIMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSNYDVPEK-----WA 175

Query: 153 IYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSGPWQDQGLCLVDWG 212
            +YT E++  L+++H +G IH D KPDN+L+  +   L + D         +G+   D  
Sbjct: 176 RFYTAEVVLALDAIHSMGFIHRDVKPDNMLLDKS-GHLKLADFGTCMKMNKEGMVRCDTA 234

Query: 213 RGIDLHLFPDNMEFEG 228
            G   ++ P+ ++ +G
Sbjct: 235 VGTPDYISPEVLKSQG 250

Protein kinase which is a key regulator of actin cytoskeleton and cell polarity. Involved in regulation of smooth muscle contraction, actin cytoskeleton organization, stress fiber and focal adhesion formation, neurite retraction, cell adhesion and motility via phosphorylation of DAPK3, GFAP, LIMK1, LIMK2, MYL9/MLC2, PFN1 and PPP1R12A. Phosphorylates FHOD1 and acts synergistically with it to promote SRC-dependent non-apoptotic plasma membrane blebbing. Phosphorylates JIP3 and regulates the recruitment of JNK to JIP3 upon UVB-induced stress. Acts as a suppressor of inflammatory cell migration by regulating PTEN phosphorylation and stability. Acts as a negative regulator of VEGF-induced angiogenic endothelial cell activation. Required for centrosome positioning and centrosome-dependent exit from mitosis. Plays a role in terminal erythroid differentiation. May regulate closure of the eyelids and ventral body wall by inducing the assembly of actomyosin bundles. Promotes keratinocyte terminal differentiation.

Rattus norvegicus (taxid: 10116)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|O14578|CTRO_HUMAN Citron Rho-interacting kinase OS=Homo sapiens GN=CIT PE=1 SV=2

 Score = 52.8 bits (125), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 46/188 (24%), Positives = 84/188 (44%), Gaps = 38/188 (20%)

Query: 41  KTIEIGGKKYQIKGCAGQGGFA--KVFKAYVNGDPEDVVALKI--QKPAFPWEFYMYRQL 96
           + ++   K ++++   G G FA  +V +    GD   + A+K+  +K     E   + + 
Sbjct: 88  QELQPSAKDFEVRSLVGCGHFAEVQVVREKATGD---IYAMKVMKKKALLAQEQVSFFEE 144

Query: 97  DQRISGRERS------SFGFAHRIHLYSDYSILVCDYLSQGTLQDAINSYVVIGKSMEEV 150
           ++ I  R  S       + F  + HLY     LV +Y   G L   +N Y      ++E 
Sbjct: 145 ERNILSRSTSPWIPQLQYAFQDKNHLY-----LVMEYQPGGDLLSLLNRY---EDQLDEN 196

Query: 151 LCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSGPWQDQGLCLVD 210
           L  +Y  E++  + S+H +G +H D KP+N+L+            DR+G      + LVD
Sbjct: 197 LIQFYLAELILAVHSVHLMGYVHRDIKPENILV------------DRTG-----HIKLVD 239

Query: 211 WGRGIDLH 218
           +G    ++
Sbjct: 240 FGSAAKMN 247

Plays a role in cytokinesis. Required for KIF14 localization to the central spindle and midbody. Putative RHO/RAC effector that binds to the GTP-bound forms of RHO and RAC1. It probably binds p21 with a tighter specificity in vivo. Dual specificity protein kinase activity catalyzing autophosphorylation and phosphorylation of exogenous substrates on both serine/threonine and tyrosine residues. Plays an important role in the regulation of cytokinesis and the development of the central nervous system. Phosphorylates MYL9/MLC2.

Homo sapiens (taxid: 9606)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	351
359485399	529	PREDICTED: mitotic checkpoint serine/thr	1.0	0.663	0.759	1e-156
302143317	552	unnamed protein product [Vitis vinifera]	1.0	0.635	0.753	1e-155
449438133	532	PREDICTED: mitotic checkpoint serine/thr	1.0	0.659	0.719	1e-154
356544986	531	PREDICTED: checkpoint serine/threonine-p	1.0	0.661	0.739	1e-154
356515164	529	PREDICTED: checkpoint serine/threonine-p	1.0	0.663	0.736	1e-152
240254494	525	catalytic domain of protein kinase and M	1.0	0.668	0.696	1e-148
255553689	586	mitotic checkpoint serine/threonine-prot	0.931	0.558	0.744	1e-146
224095521	364	predicted protein [Populus trichocarpa]	0.991	0.956	0.734	1e-146
297832662	500	predicted protein [Arabidopsis lyrata su	0.957	0.672	0.707	1e-144
222637112	560	hypothetical protein OsJ_24392 [Oryza sa	0.988	0.619	0.628	1e-129

>gi|359485399|ref|XP_002274770.2| PREDICTED: mitotic checkpoint serine/threonine-protein kinase BUB1-like [Vitis vinifera]

 Score =  558 bits (1438), Expect = e-156,   Method: Compositional matrix adjust.
 Identities = 268/353 (75%), Positives = 302/353 (85%), Gaps = 2/353 (0%)

Query: 1   MNKLLKQINSQIMKFEGYHRSNKVYSGKVALSSLNNSSRNKTIEIGGKKYQIKGCAGQGG 60
           +  LL++   QI+K++GYH S K YS KVALSSL NSSRNK IEIGG KYQIKGCAG+GG
Sbjct: 177 IKDLLQKKKPQILKYDGYHPSTKAYSRKVALSSLQNSSRNKIIEIGGYKYQIKGCAGKGG 236

Query: 61  FAKVFKAYVNGDPEDVVALKIQKPAFPWEFYMYRQLDQRISGRERSSFGFAHRIHLYSDY 120
           FA+VFKAYVN +P++VVALKIQKPAFPWEFYMYRQLD+RI  +ERSSFGFAHR+HLYSD 
Sbjct: 237 FAQVFKAYVNYNPDEVVALKIQKPAFPWEFYMYRQLDKRIPDKERSSFGFAHRLHLYSDC 296

Query: 121 SILVCDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDN 180
           SILV +YL+ GTLQDAINSYVVIG SMEEVLCIYYTIEML +LE++H VGIIHGDFKPDN
Sbjct: 297 SILVSEYLAHGTLQDAINSYVVIGGSMEEVLCIYYTIEMLYMLETIHSVGIIHGDFKPDN 356

Query: 181 LLIRYARDELTVLD-HDRSGPWQDQGLCLVDWGRGIDLHLFPDNMEFEGDCRTSGFRCIE 239
           LLIRY+R +LT  + H+R GPW+DQGLCLVDWGRGIDL LFP N EF+GDCRTSGFRC+E
Sbjct: 357 LLIRYSRHDLTEEEFHERCGPWRDQGLCLVDWGRGIDLSLFPSNTEFKGDCRTSGFRCVE 416

Query: 240 MQEKKPWKFQVDTYGLCAIVHMMLHNSYMEIEKKASPDGGLVYLPKLSFKRYWKVELWKS 299
           MQE KPWKFQVDTYGLC IVHMMLHNSYM IEKK S DGG +Y PK  FKRYW V+LWK+
Sbjct: 417 MQEHKPWKFQVDTYGLCVIVHMMLHNSYMAIEKKPSFDGGYIYQPKSPFKRYWNVQLWKN 476

Query: 300 LFTNLLNMSSGND-KEVLQNLQKSFQDYLCSNPQLLKNLKELLAKQRASLCGA 351
           LFT LLN S   D   +LQNL++SFQDY+CSNPQL+K LK LL KQRASLC A
Sbjct: 477 LFTKLLNSSPHEDHSRLLQNLRESFQDYMCSNPQLIKKLKHLLVKQRASLCCA 529

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|302143317|emb|CBI21878.3| unnamed protein product [Vitis vinifera]

 Score =  554 bits (1428), Expect = e-155,   Method: Compositional matrix adjust.
 Identities = 266/353 (75%), Positives = 300/353 (84%), Gaps = 2/353 (0%)

Query: 1   MNKLLKQINSQIMKFEGYHRSNKVYSGKVALSSLNNSSRNKTIEIGGKKYQIKGCAGQGG 60
           +  LL++   QI+K++GYH S K YS KVALSSL NSSRNK IEIGG KYQIKGCAG+GG
Sbjct: 200 IKDLLQKKKPQILKYDGYHPSTKAYSRKVALSSLQNSSRNKIIEIGGYKYQIKGCAGKGG 259

Query: 61  FAKVFKAYVNGDPEDVVALKIQKPAFPWEFYMYRQLDQRISGRERSSFGFAHRIHLYSDY 120
           FA+VFKAYVN +P++VVALKIQKPAFPWEFYMYRQLD+RI  +ERSSFGFAHR+HLYSD 
Sbjct: 260 FAQVFKAYVNYNPDEVVALKIQKPAFPWEFYMYRQLDKRIPDKERSSFGFAHRLHLYSDC 319

Query: 121 SILVCDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDN 180
           SILV +YL+ GTLQDAINSYVVIG SMEEVLCIYYTIEML +LE++H VGIIHGDFKPDN
Sbjct: 320 SILVSEYLAHGTLQDAINSYVVIGGSMEEVLCIYYTIEMLYMLETIHSVGIIHGDFKPDN 379

Query: 181 LLIRYARDELTVLD-HDRSGPWQDQGLCLVDWGRGIDLHLFPDNMEFEGDCRTSGFRCIE 239
           LLIRY+R +LT  + H+R GPW+DQGLCLVDWGRGIDL LFP N EF+GDCRTSGFRC+E
Sbjct: 380 LLIRYSRHDLTEEEFHERCGPWRDQGLCLVDWGRGIDLSLFPSNTEFKGDCRTSGFRCVE 439

Query: 240 MQEKKPWKFQVDTYGLCAIVHMMLHNSYMEIEKKASPDGGLVYLPKLSFKRYWKVELWKS 299
           MQE KPWKFQ  TYGLC IVHMMLHNSYM IEKK S DGG +Y PK  FKRYW V+LWK+
Sbjct: 440 MQEHKPWKFQAYTYGLCVIVHMMLHNSYMAIEKKPSFDGGYIYQPKSPFKRYWNVQLWKN 499

Query: 300 LFTNLLNMSSGND-KEVLQNLQKSFQDYLCSNPQLLKNLKELLAKQRASLCGA 351
           LFT LLN S   D   +LQNL++SFQDY+CSNPQL+K LK LL KQRASLC A
Sbjct: 500 LFTKLLNSSPHEDHSRLLQNLRESFQDYMCSNPQLIKKLKHLLVKQRASLCCA 552

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449438133|ref|XP_004136844.1| PREDICTED: mitotic checkpoint serine/threonine-protein kinase BUB1-like [Cucumis sativus] gi|449526259|ref|XP_004170131.1| PREDICTED: mitotic checkpoint serine/threonine-protein kinase BUB1-like [Cucumis sativus]

 Score =  550 bits (1416), Expect = e-154,   Method: Compositional matrix adjust.
 Identities = 254/353 (71%), Positives = 304/353 (86%), Gaps = 2/353 (0%)

Query: 1   MNKLLKQINSQIMKFEGYHRSNKVYSGKVALSSLNNSSRNKTIEIGGKKYQIKGCAGQGG 60
           M+ LL +I+ +IMK++GYH S K YS K+ L SL NSSRNKTIEIGGKKY+IKGCAG GG
Sbjct: 180 MSDLLNKISPKIMKYDGYHSSTKAYSKKMNLKSLRNSSRNKTIEIGGKKYEIKGCAGTGG 239

Query: 61  FAKVFKAYVNGDPEDVVALKIQKPAFPWEFYMYRQLDQRISGRERSSFGFAHRIHLYSDY 120
           FA+V+K+Y++ +P+DVVALKIQ P FPWEFYMYRQLD R++ +ERSSFG AH ++LYSDY
Sbjct: 240 FAQVYKSYLDSNPDDVVALKIQTPPFPWEFYMYRQLDLRVAAKERSSFGCAHAMYLYSDY 299

Query: 121 SILVCDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDN 180
           SIL+CDYL+ GTLQDAINSYVV+GK+MEEVLCIYYTIEML +LE+LH + IIHGDFKPDN
Sbjct: 300 SILICDYLAHGTLQDAINSYVVLGKTMEEVLCIYYTIEMLYMLETLHSIDIIHGDFKPDN 359

Query: 181 LLIRYARDELTVLD-HDRSGPWQDQGLCLVDWGRGIDLHLFPDNMEFEGDCRTSGFRCIE 239
           LLIRYA + +T     +R GPWQDQGLCLVDWGRGIDL LFP+N+EF+GDCRTSGFRC E
Sbjct: 360 LLIRYAGESVTEDGFQERHGPWQDQGLCLVDWGRGIDLQLFPENVEFKGDCRTSGFRCPE 419

Query: 240 MQEKKPWKFQVDTYGLCAIVHMMLHNSYMEIEKKASPDGGLVYLPKLSFKRYWKVELWKS 299
           M E +PWK+QVD YGLC +VH MLH SYME+EKKAS DG  VYLPK SFKRYW +ELWK+
Sbjct: 420 MLENRPWKYQVDIYGLCVVVHTMLHGSYMEVEKKASSDGDFVYLPKSSFKRYWNIELWKN 479

Query: 300 LFTNLLNMSSGN-DKEVLQNLQKSFQDYLCSNPQLLKNLKELLAKQRASLCGA 351
           LFT LLN++ G+ +KE+LQ+L+KSFQDY+CSNPQL++ LKELL KQRASLC +
Sbjct: 480 LFTKLLNITPGHYNKELLQSLRKSFQDYMCSNPQLIRKLKELLVKQRASLCTS 532

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356544986|ref|XP_003540927.1| PREDICTED: checkpoint serine/threonine-protein kinase BUB1-like [Glycine max]

 Score =  549 bits (1414), Expect = e-154,   Method: Compositional matrix adjust.
 Identities = 261/353 (73%), Positives = 300/353 (84%), Gaps = 2/353 (0%)

Query: 1   MNKLLKQINSQIMKFEGYHRSNKVYSGKVALSSLNNSSRNKTIEIGGKKYQIKGCAGQGG 60
           M+ LLK+I   IMKF+GY  S K Y+GKVALS+L NSSRNK IEIGGKKY IKGCAGQGG
Sbjct: 179 MDSLLKKIYPLIMKFDGYRSSTKPYTGKVALSTLKNSSRNKVIEIGGKKYHIKGCAGQGG 238

Query: 61  FAKVFKAYVNGDPEDVVALKIQKPAFPWEFYMYRQLDQRISGRERSSFGFAHRIHLYSDY 120
           FA+V+KA V+ DP++VVALKIQKPAFPWEFY+YRQLD+RI  RERSS+GFAHRIH+YSD 
Sbjct: 239 FAQVYKANVDSDPDNVVALKIQKPAFPWEFYIYRQLDKRILDRERSSYGFAHRIHIYSDC 298

Query: 121 SILVCDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDN 180
           SIL+CDYL+ GTLQD INSYVV+GKSMEEVLCIYYTIEML ++E+LH  G+IHGDFKPDN
Sbjct: 299 SILICDYLANGTLQDVINSYVVLGKSMEEVLCIYYTIEMLHMVETLHGFGLIHGDFKPDN 358

Query: 181 LLIRYARDELTVLD-HDRSGPWQDQGLCLVDWGRGIDLHLFPDNMEFEGDCRTSGFRCIE 239
           LLIRYAR +LT      R GPW DQGLCLVDWGRGIDLHLFPD++ F+GDCRTSGFRCIE
Sbjct: 359 LLIRYARGDLTEDGFFSRIGPWCDQGLCLVDWGRGIDLHLFPDHILFKGDCRTSGFRCIE 418

Query: 240 MQEKKPWKFQVDTYGLCAIVHMMLHNSYMEIEKKASPDGGLVYLPKLSFKRYWKVELWKS 299
           M E KPWKFQVD YGLCAIVHMMLH+SYME+ KK   DG  +YLPKL FKRYW +ELWK+
Sbjct: 419 MLEDKPWKFQVDAYGLCAIVHMMLHSSYMEVVKKEQSDGSYMYLPKLPFKRYWNIELWKT 478

Query: 300 LFTNLLNM-SSGNDKEVLQNLQKSFQDYLCSNPQLLKNLKELLAKQRASLCGA 351
            FT +LN     +D+ +LQ+L+KSFQDY+ SNPQL+K LKELL+KQRASLC A
Sbjct: 479 FFTKMLNQYPHDDDRSLLQDLKKSFQDYMSSNPQLIKKLKELLSKQRASLCSA 531

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356515164|ref|XP_003526271.1| PREDICTED: checkpoint serine/threonine-protein kinase BUB1-like [Glycine max]

 Score =  545 bits (1403), Expect = e-152,   Method: Compositional matrix adjust.
 Identities = 260/353 (73%), Positives = 298/353 (84%), Gaps = 2/353 (0%)

Query: 1   MNKLLKQINSQIMKFEGYHRSNKVYSGKVALSSLNNSSRNKTIEIGGKKYQIKGCAGQGG 60
           M+ LLK+I   IMKF+GY  S K Y+GKVALS+L NSSRNK +EIGG KY IKGCAGQGG
Sbjct: 177 MDSLLKKIYPLIMKFDGYRSSTKPYTGKVALSTLKNSSRNKVLEIGGMKYHIKGCAGQGG 236

Query: 61  FAKVFKAYVNGDPEDVVALKIQKPAFPWEFYMYRQLDQRISGRERSSFGFAHRIHLYSDY 120
           FA+V+KA V+ DP++VVALKIQKPAFPWEFY+YR LD+RI  RERSS+GFAHRIH+YSD 
Sbjct: 237 FAQVYKANVDSDPDNVVALKIQKPAFPWEFYVYRLLDKRILDRERSSYGFAHRIHVYSDC 296

Query: 121 SILVCDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDN 180
           SIL+CDYL+ GTLQD INSYVVIGKSMEEVLCIYYTIEML ++E+LH VG+IHGDFKPDN
Sbjct: 297 SILICDYLANGTLQDVINSYVVIGKSMEEVLCIYYTIEMLHMVETLHGVGLIHGDFKPDN 356

Query: 181 LLIRYARDELTVLDH-DRSGPWQDQGLCLVDWGRGIDLHLFPDNMEFEGDCRTSGFRCIE 239
           LLIRYAR +LT      RSGPW DQGLCLVDWGRGIDLHLFPD+  F+GDC+TSGFRCIE
Sbjct: 357 LLIRYARGDLTEDGFLSRSGPWCDQGLCLVDWGRGIDLHLFPDHTLFKGDCKTSGFRCIE 416

Query: 240 MQEKKPWKFQVDTYGLCAIVHMMLHNSYMEIEKKASPDGGLVYLPKLSFKRYWKVELWKS 299
           M E KPWKFQVD YGLCA+VHMMLHN YME+ KK   DG  +YLPKL FKRYW +ELWK+
Sbjct: 417 MLEDKPWKFQVDAYGLCAVVHMMLHNCYMEVVKKEQSDGSYMYLPKLPFKRYWNIELWKT 476

Query: 300 LFTNLLNM-SSGNDKEVLQNLQKSFQDYLCSNPQLLKNLKELLAKQRASLCGA 351
            FT +LN     +D+ +LQ+L+KSFQDYL SNPQL+K LKELL+KQRASLC A
Sbjct: 477 FFTKMLNQYPHDDDRSLLQDLKKSFQDYLSSNPQLIKKLKELLSKQRASLCSA 529

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|240254494|ref|NP_179656.4| catalytic domain of protein kinase and Mad3-BUB1-I domain-containing protein [Arabidopsis thaliana] gi|330251957|gb|AEC07051.1| catalytic domain of protein kinase and Mad3-BUB1-I domain-containing protein [Arabidopsis thaliana]

 Score =  530 bits (1364), Expect = e-148,   Method: Compositional matrix adjust.
 Identities = 246/353 (69%), Positives = 294/353 (83%), Gaps = 2/353 (0%)

Query: 1   MNKLLKQINSQIMKFEGYHRSNKVYSGKVALSSLNNSSRNKTIEIGGKKYQIKGCAGQGG 60
           +N L+ +I  Q++K++GYH SNKV+ GK  LSSL N SRNK IEIGG+KYQ+KGCAGQGG
Sbjct: 173 VNGLIHKIKPQLVKYDGYHVSNKVFPGKANLSSLQNYSRNKIIEIGGRKYQMKGCAGQGG 232

Query: 61  FAKVFKAYVNGDPEDVVALKIQKPAFPWEFYMYRQLDQRISGRERSSFGFAHRIHLYSDY 120
           FA+VFKA+++ +P++VVALK+QKP FPWEF+MYRQLD RI   +RSSFG A R+H+YSDY
Sbjct: 233 FAQVFKAFIDSNPDEVVALKVQKPPFPWEFHMYRQLDCRIPDSQRSSFGLAQRVHVYSDY 292

Query: 121 SILVCDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDN 180
           SILVCDYLS GTLQD INSYVV+GKSMEEVLC+YYTIEML +LE+LH VGIIHGDFKPDN
Sbjct: 293 SILVCDYLSHGTLQDVINSYVVVGKSMEEVLCMYYTIEMLNMLETLHSVGIIHGDFKPDN 352

Query: 181 LLIRYARDELTVLD-HDRSGPWQDQGLCLVDWGRGIDLHLFPDNMEFEGDCRTSGFRCIE 239
           LLIRY  + LT    H+++G W  +GLCLVDWGRGIDL LFP   EF GDCRTSGFRC+E
Sbjct: 353 LLIRYPPENLTETGFHEKTGSWSKKGLCLVDWGRGIDLSLFPRTTEFTGDCRTSGFRCVE 412

Query: 240 MQEKKPWKFQVDTYGLCAIVHMMLHNSYMEIEKKASPDGGLVYLPKLSFKRYWKVELWKS 299
           M+E KPWKFQVDTYGLC IVHMMLHN YMEIEKK S DGG + +P+ SFKRYWKV+LWK 
Sbjct: 413 MKEDKPWKFQVDTYGLCVIVHMMLHNVYMEIEKKQSLDGGYINMPRTSFKRYWKVDLWKE 472

Query: 300 LFTNLLNMSS-GNDKEVLQNLQKSFQDYLCSNPQLLKNLKELLAKQRASLCGA 351
           LFT LLN  +  +D E L+NL+KS ++Y+CS+P+L+K L ELLAKQR SLC +
Sbjct: 473 LFTKLLNRETCEDDTETLRNLRKSMEEYICSDPKLMKKLNELLAKQRISLCSS 525

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255553689|ref|XP_002517885.1| mitotic checkpoint serine/threonine-protein kinase bub1 and bubr1, putative [Ricinus communis] gi|223542867|gb|EEF44403.1| mitotic checkpoint serine/threonine-protein kinase bub1 and bubr1, putative [Ricinus communis]

 Score =  525 bits (1353), Expect = e-146,   Method: Compositional matrix adjust.
 Identities = 245/329 (74%), Positives = 284/329 (86%), Gaps = 2/329 (0%)

Query: 3   KLLKQINSQIMKFEGYHRSNKVYSGKVALSSLNNSSRNKTIEIGGKKYQIKGCAGQGGFA 62
           +LLK+IN  I +++GYH   K Y G+V LSSL N+SRNK ++IGGK YQIKGCAGQGGFA
Sbjct: 172 ELLKKINPHIRRYDGYHPYKKAYPGQVNLSSLGNASRNKIVKIGGKLYQIKGCAGQGGFA 231

Query: 63  KVFKAYVNGDPEDVVALKIQKPAFPWEFYMYRQLDQRISGRERSSFGFAHRIHLYSDYSI 122
           KV+KAYVN +P+DVVALKIQ P FPWEFYMYRQLD RIS  +RSSFGFAH +H+YSDYSI
Sbjct: 232 KVYKAYVNSNPDDVVALKIQTPPFPWEFYMYRQLDHRISNTQRSSFGFAHEMHVYSDYSI 291

Query: 123 LVCDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLL 182
           LVCDYL  GTL D INSYVVIGKSMEEVLCIYYTIEML +LE+LH +G+IHGDFKPDNLL
Sbjct: 292 LVCDYL-HGTLHDVINSYVVIGKSMEEVLCIYYTIEMLYMLETLHGIGLIHGDFKPDNLL 350

Query: 183 IRYARDELTVLDHD-RSGPWQDQGLCLVDWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQ 241
           +RY+R++L   + + R+G W DQGLCLVDWG+GIDLHLFPD+++FEGDCRTSGFRCIEMQ
Sbjct: 351 LRYSREDLNENEFEGRTGSWADQGLCLVDWGKGIDLHLFPDDIKFEGDCRTSGFRCIEMQ 410

Query: 242 EKKPWKFQVDTYGLCAIVHMMLHNSYMEIEKKASPDGGLVYLPKLSFKRYWKVELWKSLF 301
           EKK W+FQVDTYGLC +VH MLHNSYMEIEKKA+ DGG VYLPK SF+RYW V+LWK LF
Sbjct: 411 EKKQWRFQVDTYGLCVVVHTMLHNSYMEIEKKATYDGGYVYLPKTSFRRYWNVDLWKELF 470

Query: 302 TNLLNMSSGNDKEVLQNLQKSFQDYLCSN 330
           T LLN S  NDK++LQNL++ FQDYLCSN
Sbjct: 471 TQLLNNSPQNDKQLLQNLRERFQDYLCSN 499

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224095521|ref|XP_002310405.1| predicted protein [Populus trichocarpa] gi|222853308|gb|EEE90855.1| predicted protein [Populus trichocarpa]

 Score =  524 bits (1350), Expect = e-146,   Method: Compositional matrix adjust.
 Identities = 257/350 (73%), Positives = 301/350 (86%), Gaps = 2/350 (0%)

Query: 3   KLLKQINSQIMKFEGYHRSNKVYSGKVALSSLNNSSRNKTIEIGGKKYQIKGCAGQGGFA 62
           +LL++IN Q+MK+ GYH S K YSG VALS+L NSSRNK ++IGGKKY+IKGC  +GGFA
Sbjct: 16  ELLERINPQMMKYAGYHPSKKAYSGDVALSTLQNSSRNKIVKIGGKKYEIKGCPVKGGFA 75

Query: 63  KVFKAYVNGDPEDVVALKIQKPAFPWEFYMYRQLDQRISGRERSSFGFAHRIHLYSDYSI 122
           +V+KAYVN +P++VVALKIQ+P FPWEF+MYRQLDQRI   + SSFG+AHR+HL+SDYSI
Sbjct: 76  QVYKAYVNSNPDEVVALKIQRPPFPWEFHMYRQLDQRIPDNQSSSFGYAHRLHLFSDYSI 135

Query: 123 LVCDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLL 182
           LVCDYLS GTLQD INSYVV GK MEEVLCIYYTIEML +LE+LH VGIIHGDFKPDNLL
Sbjct: 136 LVCDYLSHGTLQDVINSYVVTGKPMEEVLCIYYTIEMLHMLETLHGVGIIHGDFKPDNLL 195

Query: 183 IRYARDELTVLD-HDRSGPWQDQGLCLVDWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQ 241
           IRY+R  LT     +RSGPW+DQGLCLVDWGRGIDLHLFPD++EFEGDCRTSGFRC+EMQ
Sbjct: 196 IRYSRSNLTEDGFKERSGPWRDQGLCLVDWGRGIDLHLFPDDIEFEGDCRTSGFRCVEMQ 255

Query: 242 EKKPWKFQVDTYGLCAIVHMMLHNSYMEIEKKASPDGGLVYLPKLSFKRYWKVELWKSLF 301
           E+KPW FQVDTYGLC ++HMMLH+SYMEI KK + DGG +YLPK  FKRYW  +LWK LF
Sbjct: 256 ERKPWTFQVDTYGLCVVIHMMLHHSYMEIVKKGTSDGGYMYLPKAPFKRYWS-DLWKDLF 314

Query: 302 TNLLNMSSGNDKEVLQNLQKSFQDYLCSNPQLLKNLKELLAKQRASLCGA 351
           T LLN +SGND E+L+NL+KSF+DYL S+ +LL+ LKELLAKQR  LC A
Sbjct: 315 TKLLNNNSGNDCELLRNLRKSFEDYLHSDDKLLRKLKELLAKQRLLLCSA 364

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297832662|ref|XP_002884213.1| predicted protein [Arabidopsis lyrata subsp. lyrata] gi|297330053|gb|EFH60472.1| predicted protein [Arabidopsis lyrata subsp. lyrata]

 Score =  517 bits (1331), Expect = e-144,   Method: Compositional matrix adjust.
 Identities = 244/345 (70%), Positives = 285/345 (82%), Gaps = 9/345 (2%)

Query: 16  EGYHRSNKVYSGKVALSSLNNSSRNKTIEIGGKKYQIKGCAGQGGFAKVFKAYVNGDPED 75
           EGYH SNKV+ GK  LSSL N SRNK I+IGG+KYQ+KGCAGQGGFA+VFKAY++ +P++
Sbjct: 156 EGYHASNKVFPGKANLSSLQNYSRNKIIDIGGRKYQMKGCAGQGGFAQVFKAYIDSNPDE 215

Query: 76  VVALKIQKPAFPWEFYMYRQLDQRISGRERSSFGFAHRIHLYSDYSILVCDYLSQGTLQD 135
           VVALK+QKP FPWEF+MYRQLD RI   +RSSFG A R+H+YSDYSILVCDYLS GTLQD
Sbjct: 216 VVALKVQKPPFPWEFHMYRQLDCRIPESQRSSFGLAQRVHVYSDYSILVCDYLSHGTLQD 275

Query: 136 AINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLD- 194
            INSYVV+GKSMEEVLC+YYTIEML +LE+LH VGIIHGDFKPDNLLIRY  + LT    
Sbjct: 276 VINSYVVVGKSMEEVLCMYYTIEMLYMLETLHSVGIIHGDFKPDNLLIRYPPENLTETGF 335

Query: 195 HDRSGPWQDQGLCLVDWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQEKKPWKFQ----- 249
           HD++G W +QGLCLVDWGRGIDL LFP   EF GDCRTSGFRC+EM+EKKPWKFQ     
Sbjct: 336 HDKTGSWSNQGLCLVDWGRGIDLSLFPRTTEFTGDCRTSGFRCMEMKEKKPWKFQASLLI 395

Query: 250 --VDTYGLCAIVHMMLHNSYMEIEKKASPDGGLVYLPKLSFKRYWKVELWKSLFTNLLNM 307
             VDTYGLC IVHMMLHNSYMEIEKK S DGG + +P+ SF+RYW V+LWK LFT LLN 
Sbjct: 396 HTVDTYGLCVIVHMMLHNSYMEIEKKQSLDGGHINMPRTSFRRYWNVDLWKELFTKLLNR 455

Query: 308 SS-GNDKEVLQNLQKSFQDYLCSNPQLLKNLKELLAKQRASLCGA 351
            +  +D E L+NL+KS ++Y+CS+P+L+K L ELLAKQR SLC +
Sbjct: 456 ETCEDDTETLRNLRKSMEEYICSDPKLMKKLNELLAKQRISLCSS 500

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|222637112|gb|EEE67244.1| hypothetical protein OsJ_24392 [Oryza sativa Japonica Group] gi|392937540|gb|AFM93783.1| Bub1-like kinase [Oryza sativa Indica Group]

 Score =  468 bits (1204), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 222/353 (62%), Positives = 268/353 (75%), Gaps = 6/353 (1%)

Query: 1   MNKLLKQINSQIMKFEGYHRSNKVYSGKVALSSLNNSSRNKTIEIGGKKYQIKGCAGQGG 60
           MN LL+ IN  + KF GYH+SNKVY GKV L+S  N  RNK IE+GG+KYQIKG  G G 
Sbjct: 208 MNNLLENINVDLKKFAGYHKSNKVYHGKVPLTSPQNVLRNKVIELGGRKYQIKGSPGTGA 267

Query: 61  FAKVFKAYVNGDPEDVVALKIQKPAFPWEFYMYRQLDQRISGRERSSFGFAHRIHLYSDY 120
           FAKV+KA V+G+ ED+VALKIQKP FPWEFYMYRQLD R+S  ER SFG+ H +H+Y+D 
Sbjct: 268 FAKVYKASVDGNTEDLVALKIQKPPFPWEFYMYRQLDTRVSDIERPSFGYTHEVHVYADV 327

Query: 121 SILVCDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDN 180
           S+LVCDYL  GTL D INS++V+ + M+EVLCIYYTIEML +LE+LH VGIIHGDFKPDN
Sbjct: 328 SVLVCDYLPYGTLLDVINSHLVLERHMDEVLCIYYTIEMLRMLETLHSVGIIHGDFKPDN 387

Query: 181 LLIRYARDELTVLDHDRSGPW---QDQGLCLVDWGRGIDLHLFPDNMEFEGDCRTSGFRC 237
           +L+ Y   E+T  D    G     ++QGLCLVDWGRGIDL+LFP   EF GDCRTSGF C
Sbjct: 388 MLVCYPSGEIT--DETFKGETRSERNQGLCLVDWGRGIDLNLFPSGAEFYGDCRTSGFSC 445

Query: 238 IEMQEKKPWKFQVDTYGLCAIVHMMLHNSYMEIEKKASPDGGLVYLPKLSFKRYWKVELW 297
           +EMQE++ W FQ DTYGLC I HMMLH + M I+K   PDG  +Y P   FKRYW VELW
Sbjct: 446 VEMQEQRAWTFQADTYGLCVIAHMMLHGTQMSIQKTPRPDGSYMYQPTSPFKRYWNVELW 505

Query: 298 KSLFTNLLNMSS-GNDKEVLQNLQKSFQDYLCSNPQLLKNLKELLAKQRASLC 349
           K+LF+ LLN +S G+D  VL++L+ SFQ+YLCSN QL+  L + LAKQ+ SLC
Sbjct: 506 KNLFSTLLNATSNGSDAAVLRSLRMSFQEYLCSNRQLVGKLNQQLAKQKTSLC 558

Source: Oryza sativa Japonica Group

Species: Oryza sativa

Genus: Oryza

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	351
TAIR|locus:2827363	525	AT2G20635 [Arabidopsis thalian	1.0	0.668	0.696	2.4e-138
CGD|CAL0003517	900	BUB1 [Candida albicans (taxid:	0.860	0.335	0.362	1.5e-47
UNIPROTKB|Q5AFC9	900	BUB1 "Likely protein kinase" [	0.860	0.335	0.362	1.5e-47
UNIPROTKB|E2RAD4	1084	BUB1 "Uncharacterized protein"	0.843	0.273	0.376	4.1e-46
UNIPROTKB|J9NX78	1086	BUB1 "Uncharacterized protein"	0.843	0.272	0.376	4.1e-46
UNIPROTKB|I3LQP0	447	I3LQP0 "Uncharacterized protei	0.831	0.653	0.366	6.2e-46
SGD|S000003420	1021	BUB1 "Protein kinase involved	0.868	0.298	0.344	8.7e-45
UNIPROTKB|F1NDM5	1086	BUB1 "Uncharacterized protein"	0.823	0.266	0.360	3.5e-44
UNIPROTKB|A6QLW0	1078	BUB1 "BUB1 protein" [Bos tauru	0.846	0.275	0.361	3.2e-43
ZFIN|ZDB-GENE-081104-75	1202	si:ch1073-192f24.1 "si:ch1073-	0.834	0.243	0.360	1.1e-42

TAIR|locus:2827363 AT2G20635 [Arabidopsis thaliana (taxid:3702)]

 Score = 1354 (481.7 bits), Expect = 2.4e-138, P = 2.4e-138
 Identities = 246/353 (69%), Positives = 294/353 (83%)

Query:     1 MNKLLKQINSQIMKFEGYHRSNKVYSGKVALSSLNNSSRNKTIEIGGKKYQIKGCAGQGG 60
             +N L+ +I  Q++K++GYH SNKV+ GK  LSSL N SRNK IEIGG+KYQ+KGCAGQGG
Sbjct:   173 VNGLIHKIKPQLVKYDGYHVSNKVFPGKANLSSLQNYSRNKIIEIGGRKYQMKGCAGQGG 232

Query:    61 FAKVFKAYVNGDPEDVVALKIQKPAFPWEFYMYRQLDQRISGRERSSFGFAHRIHLYSDY 120
             FA+VFKA+++ +P++VVALK+QKP FPWEF+MYRQLD RI   +RSSFG A R+H+YSDY
Sbjct:   233 FAQVFKAFIDSNPDEVVALKVQKPPFPWEFHMYRQLDCRIPDSQRSSFGLAQRVHVYSDY 292

Query:   121 SILVCDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDN 180
             SILVCDYLS GTLQD INSYVV+GKSMEEVLC+YYTIEML +LE+LH VGIIHGDFKPDN
Sbjct:   293 SILVCDYLSHGTLQDVINSYVVVGKSMEEVLCMYYTIEMLNMLETLHSVGIIHGDFKPDN 352

Query:   181 LLIRYARDELTVLD-HDRSGPWQDQGLCLVDWGRGIDLHLFPDNMEFEGDCRTSGFRCIE 239
             LLIRY  + LT    H+++G W  +GLCLVDWGRGIDL LFP   EF GDCRTSGFRC+E
Sbjct:   353 LLIRYPPENLTETGFHEKTGSWSKKGLCLVDWGRGIDLSLFPRTTEFTGDCRTSGFRCVE 412

Query:   240 MQEKKPWKFQVDTYGLCAIVHMMLHNSYMEIEKKASPDGGLVYLPKLSFKRYWKVELWKS 299
             M+E KPWKFQVDTYGLC IVHMMLHN YMEIEKK S DGG + +P+ SFKRYWKV+LWK 
Sbjct:   413 MKEDKPWKFQVDTYGLCVIVHMMLHNVYMEIEKKQSLDGGYINMPRTSFKRYWKVDLWKE 472

Query:   300 LFTNLLNMSS-GNDKEVLQNLQKSFQDYLCSNPQLLKNLKELLAKQRASLCGA 351
             LFT LLN  +  +D E L+NL+KS ++Y+CS+P+L+K L ELLAKQR SLC +
Sbjct:   473 LFTKLLNRETCEDDTETLRNLRKSMEEYICSDPKLMKKLNELLAKQRISLCSS 525

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

CGD|CAL0003517 BUB1 [Candida albicans (taxid:5476)]

 Score = 505 (182.8 bits), Expect = 1.5e-47, P = 1.5e-47
 Identities = 117/323 (36%), Positives = 184/323 (56%)

Query:    33 SLNNSSRNKTIEIGGKK-YQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFPWEFY 91
             ++N  S +  I+  G++ Y +    GQGG+  V+     G    + ALKI+ P+  WEFY
Sbjct:   569 TINRGSSSAIIDYCGQELYCLLHELGQGGYGFVYLIEA-GSTGKLKALKIETPSSRWEFY 627

Query:    92 MYRQLDQRI---SGRERSSFGFAHRIHLYSDYSILVCDYLSQGTLQDAINSYVVIGKSME 148
             +  Q+ +R+   +G ++  F  A  ++ + D S L+ DY SQ TL D +N+Y   G S+E
Sbjct:   628 ILHQVHRRLIGEAGYKQRYFIRAEALYYFQDESFLILDYCSQSTLLDVVNNYKNKGSSLE 687

Query:   149 EVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYAR-DELTVLD-HDRSGP--WQDQ 204
             E L I++T+E+L  LE+LH VGI+HGD K DN ++R+   +E    + +DRSG   W  +
Sbjct:   688 ECLVIFFTVELLKALEALHSVGILHGDLKADNCMVRFEPINESDWSERYDRSGKFGWSHK 747

Query:   205 GLCLVDWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQEKKPWKFQVDTYGLCAIVHMMLH 264
              + L+D+GR +D+ LF     F    +     C +M E  PW ++ D YGL  I+H +L 
Sbjct:   748 SITLIDFGRAVDMTLFSSGTRFVSSFKADEQDCPQMNEGTPWSYEADYYGLATIIHTLLF 807

Query:   265 NSYMEIEKKASPDGGLVYLPKLSFKRYWKVELWKSLFTNLLNMSSGND------KEVLQN 318
              SY++I+K    DG  + L   +FKRYW+ ELW+ LF  LLN  S  +       E L  
Sbjct:   808 GSYIKIKK----DGSKIKL-HANFKRYWQHELWQDLFELLLNPYSSAEVNHAPRTESLAT 862

Query:   319 LQKSFQDYLCSNPQLLKNLKELL 341
             +++ F+++L SN ++ K LK L+
Sbjct:   863 IREHFENWLESNSKM-KYLKGLI 884

GO:0035690 "cellular response to drug" evidence=IMP

GO:0072371 "histone kinase activity (H2A-S121 specific)" evidence=IEA

GO:0000778 "condensed nuclear chromosome kinetochore" evidence=IEA

GO:0072370 "histone H2A-S121 phosphorylation" evidence=IEA

GO:0051455 "attachment of spindle microtubules to kinetochore involved in homologous chromosome segregation" evidence=IEA

GO:0007094 "mitotic spindle assembly checkpoint" evidence=IEA

GO:0031134 "sister chromatid biorientation" evidence=IEA

GO:0034501 "protein localization to kinetochore" evidence=IEA

GO:0051754 "meiotic sister chromatid cohesion, centromeric" evidence=IEA

UNIPROTKB|Q5AFC9 BUB1 "Likely protein kinase" [Candida albicans SC5314 (taxid:237561)]

 Score = 505 (182.8 bits), Expect = 1.5e-47, P = 1.5e-47
 Identities = 117/323 (36%), Positives = 184/323 (56%)

Query:    33 SLNNSSRNKTIEIGGKK-YQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFPWEFY 91
             ++N  S +  I+  G++ Y +    GQGG+  V+     G    + ALKI+ P+  WEFY
Sbjct:   569 TINRGSSSAIIDYCGQELYCLLHELGQGGYGFVYLIEA-GSTGKLKALKIETPSSRWEFY 627

Query:    92 MYRQLDQRI---SGRERSSFGFAHRIHLYSDYSILVCDYLSQGTLQDAINSYVVIGKSME 148
             +  Q+ +R+   +G ++  F  A  ++ + D S L+ DY SQ TL D +N+Y   G S+E
Sbjct:   628 ILHQVHRRLIGEAGYKQRYFIRAEALYYFQDESFLILDYCSQSTLLDVVNNYKNKGSSLE 687

Query:   149 EVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYAR-DELTVLD-HDRSGP--WQDQ 204
             E L I++T+E+L  LE+LH VGI+HGD K DN ++R+   +E    + +DRSG   W  +
Sbjct:   688 ECLVIFFTVELLKALEALHSVGILHGDLKADNCMVRFEPINESDWSERYDRSGKFGWSHK 747

Query:   205 GLCLVDWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQEKKPWKFQVDTYGLCAIVHMMLH 264
              + L+D+GR +D+ LF     F    +     C +M E  PW ++ D YGL  I+H +L 
Sbjct:   748 SITLIDFGRAVDMTLFSSGTRFVSSFKADEQDCPQMNEGTPWSYEADYYGLATIIHTLLF 807

Query:   265 NSYMEIEKKASPDGGLVYLPKLSFKRYWKVELWKSLFTNLLNMSSGND------KEVLQN 318
              SY++I+K    DG  + L   +FKRYW+ ELW+ LF  LLN  S  +       E L  
Sbjct:   808 GSYIKIKK----DGSKIKL-HANFKRYWQHELWQDLFELLLNPYSSAEVNHAPRTESLAT 862

Query:   319 LQKSFQDYLCSNPQLLKNLKELL 341
             +++ F+++L SN ++ K LK L+
Sbjct:   863 IREHFENWLESNSKM-KYLKGLI 884

GO:0035690 "cellular response to drug" evidence=IMP

UNIPROTKB|E2RAD4 BUB1 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 494 (179.0 bits), Expect = 4.1e-46, P = 4.1e-46
 Identities = 120/319 (37%), Positives = 176/319 (55%)

Query:    41 KT-IEIGGKKYQIKGCAGQGGFAKVFKAYVNGDPEDV-----VALKIQKPAFPWEFYMYR 94
             KT  ++G     +    G+G FA+V++   +G+  D        LK+QKPA PWEFY+  
Sbjct:   775 KTEFQLGSLLVYVDHLLGEGAFAQVYEV-THGEVNDTKNKQKFVLKVQKPANPWEFYIGT 833

Query:    95 QLDQRISGRERSSFGFAHRIHLYSDYSILVCDYLSQGTLQDAINSYV-VIGKSMEEVLCI 153
             QL +R+    R  F   +  HL+ + S+LV D  S GTL +AIN Y     K M + L +
Sbjct:   834 QLMERLKPSMRHMFIKFYSAHLFQNGSVLVGDLYSYGTLLNAINLYKNTPEKVMPQALVL 893

Query:   154 YYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSGPWQDQGLCLVDWGR 213
              + I MLC++E +HD  IIHGD KPDN ++     E    D D S      GL L+D G+
Sbjct:   894 SFAIRMLCMIEQVHDCEIIHGDIKPDNFILGSRFLEQDGEDDDISA-----GLALIDLGQ 948

Query:   214 GIDLHLFPDNMEFEGDCRTSGFRCIEMQEKKPWKFQVDTYGLCAIVHMMLHNSYMEIEKK 273
              ID+ LFP    F G C TSGF+CIEM   KPW +Q+D +G+ A V+ ML  +YM+++  
Sbjct:   949 SIDMKLFPKGTTFTGKCETSGFQCIEMLSNKPWNYQIDYFGVAATVYCMLFGTYMKVKN- 1007

Query:   274 ASPDGGLVYLPKLSFKRYWKVELWKSLFTNLLNMSSGNDKEVL----QNLQKSFQDYLCS 329
                +GG V+ P+  F+R   +++W   F  +LN+   +    L    QNL+K+FQ +  S
Sbjct:  1008 ---EGG-VWKPEGLFRRLPHLDMWSEFFHIMLNIPDCHHLPSLDLLKQNLKKTFQQHYSS 1063

Query:   330 NPQLLKN-LKELLAKQRAS 347
               + L+N L  LL + + S
Sbjct:  1064 KIKTLRNRLIVLLLEYKRS 1082

GO:0005524 "ATP binding" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

UNIPROTKB|J9NX78 BUB1 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 494 (179.0 bits), Expect = 4.1e-46, P = 4.1e-46
 Identities = 120/319 (37%), Positives = 176/319 (55%)

Query:    41 KT-IEIGGKKYQIKGCAGQGGFAKVFKAYVNGDPEDV-----VALKIQKPAFPWEFYMYR 94
             KT  ++G     +    G+G FA+V++   +G+  D        LK+QKPA PWEFY+  
Sbjct:   777 KTEFQLGSLLVYVDHLLGEGAFAQVYEV-THGEVNDTKNKQKFVLKVQKPANPWEFYIGT 835

Query:    95 QLDQRISGRERSSFGFAHRIHLYSDYSILVCDYLSQGTLQDAINSYV-VIGKSMEEVLCI 153
             QL +R+    R  F   +  HL+ + S+LV D  S GTL +AIN Y     K M + L +
Sbjct:   836 QLMERLKPSMRHMFIKFYSAHLFQNGSVLVGDLYSYGTLLNAINLYKNTPEKVMPQALVL 895

Query:   154 YYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSGPWQDQGLCLVDWGR 213
              + I MLC++E +HD  IIHGD KPDN ++     E    D D S      GL L+D G+
Sbjct:   896 SFAIRMLCMIEQVHDCEIIHGDIKPDNFILGSRFLEQDGEDDDISA-----GLALIDLGQ 950

Query:   214 GIDLHLFPDNMEFEGDCRTSGFRCIEMQEKKPWKFQVDTYGLCAIVHMMLHNSYMEIEKK 273
              ID+ LFP    F G C TSGF+CIEM   KPW +Q+D +G+ A V+ ML  +YM+++  
Sbjct:   951 SIDMKLFPKGTTFTGKCETSGFQCIEMLSNKPWNYQIDYFGVAATVYCMLFGTYMKVKN- 1009

Query:   274 ASPDGGLVYLPKLSFKRYWKVELWKSLFTNLLNMSSGNDKEVL----QNLQKSFQDYLCS 329
                +GG V+ P+  F+R   +++W   F  +LN+   +    L    QNL+K+FQ +  S
Sbjct:  1010 ---EGG-VWKPEGLFRRLPHLDMWSEFFHIMLNIPDCHHLPSLDLLKQNLKKTFQQHYSS 1065

Query:   330 NPQLLKN-LKELLAKQRAS 347
               + L+N L  LL + + S
Sbjct:  1066 KIKTLRNRLIVLLLEYKRS 1084

GO:0005524 "ATP binding" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

UNIPROTKB|I3LQP0 I3LQP0 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 482 (174.7 bits), Expect = 6.2e-46, P = 6.2e-46
 Identities = 117/319 (36%), Positives = 177/319 (55%)

Query:    41 KT-IEIGGKKYQIKGCAGQGGFAKVFKAYVNGDPED-----VVALKIQKPAFPWEFYMYR 94
             KT  ++G     I    G+G FA+V++   +GD  D        LK+QKPA PWEFY+  
Sbjct:   142 KTEFQLGSLVVYIDHLLGEGAFAQVYEV-THGDVNDNKNKQKFVLKVQKPANPWEFYIGT 200

Query:    95 QLDQRISGRERSSFGFAHRIHLYSDYSILVCDYLSQGTLQDAINSYV-VIGKSMEEVLCI 153
             QL +R+    R  F   +  HL+ + S+LV D  S GTL +AIN Y     K M + L +
Sbjct:   201 QLMERLKPSMRHMFIKFYSAHLFQNGSVLVGDLYSYGTLLNAINLYKNTPEKVMPQALVL 260

Query:   154 YYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSGPWQDQGLCLVDWGR 213
              + I MLC++E +HD  IIHGD KPDN ++         L+ D  G  +D GL L+D G+
Sbjct:   261 TFAIRMLCMIEQVHDCEIIHGDIKPDNFILGNR-----FLEQD--G--EDDGLALIDLGQ 311

Query:   214 GIDLHLFPDNMEFEGDCRTSGFRCIEMQEKKPWKFQVDTYGLCAIVHMMLHNSYMEIEKK 273
              ID+ LFP    F G C TSGF+C+EM   +PW +Q+D +G+ A V+ ML  +YM+++  
Sbjct:   312 SIDMKLFPKGTAFTGKCETSGFQCVEMLSNRPWNYQIDYFGVAATVYCMLFGTYMKVKN- 370

Query:   274 ASPDGGLVYLPKLSFKRYWKVELWKSLFTNLLNMSSGNDKEVL----QNLQKSFQDYLCS 329
                +GG V+ P+  F+R   +++W   F  +LN+   +    L    Q L++ FQ++  +
Sbjct:   371 ---EGG-VWKPEGLFRRLPHLDMWNEFFHIMLNIPDCHHLPPLDLIRQKLKQVFQEHYAN 426

Query:   330 NPQLLKN-LKELLAKQRAS 347
               + L+N L  LL + + S
Sbjct:   427 KIKTLRNRLIVLLLEYKRS 445

GO:0005524 "ATP binding" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

SGD|S000003420 BUB1 "Protein kinase involved in the cell cycle checkpoint into anaphase" [Saccharomyces cerevisiae (taxid:4932)]

 Score = 481 (174.4 bits), Expect = 8.7e-45, P = 8.7e-45
 Identities = 112/325 (34%), Positives = 178/325 (54%)

Query:     3 KLLKQINSQIMKFEGYHRSNKVYSGKVALSSLNNSSRN--KTIEIGGKK----YQIKGCA 56
             K L +I+  + ++  ++  N+       L  ++  SRN  K   +  KK    Y I+G  
Sbjct:   652 KFLSEISPPLFQYNTFYNYNQELKMSSLLKKIHRVSRNENKNPIVDFKKTGDLYCIRGEL 711

Query:    57 GQGGFAKVFKAYVNGDPEDVVALKIQKPAFPWEFYMYRQLDQRI-SGRERSSFGFAHRIH 115
             G+GG+A V+ A        + ALK++KPA  WE+Y+  Q++ R+       S   A  +H
Sbjct:   712 GEGGYATVYLA--ESSQGHLRALKVEKPASVWEYYIMSQVEFRLRKSTILKSIINASALH 769

Query:   116 LYSDYSILVCDYLSQGTLQDAIN---SYVVIGKS-MEEVLCIYYTIEMLCILESLHDVGI 171
             L+ D S LV +Y SQGT+ D IN      + G   M+E LC++ T+E++ +LE +H+VGI
Sbjct:   770 LFLDESYLVLNYASQGTVLDLINLQREKAIDGNGIMDEYLCMFITVELMKVLEKIHEVGI 829

Query:   172 IHGDFKPDNLLIRYARD-ELTVLDHDRSGP--WQDQGLCLVDWGRGIDLHLFPDNMEFEG 228
             IHGD KPDN +IR  +  E     + R+G   W+++G+ L+D+GR  D+ L P   +F+ 
Sbjct:   830 IHGDLKPDNCMIRLEKPGEPLGAHYMRNGEDGWENKGIYLIDFGRSFDMTLLPPGTKFKS 889

Query:   229 DCRTSGFRCIEMQEKKPWKFQVDTYGLCAIVHMMLHNSYMEIEKKASPDGGLVYLPKLSF 288
             + +     C EM+  KPW ++ D YGL  ++H ML   ++E  +  +   G   L K  F
Sbjct:   890 NWKADQQDCWEMRAGKPWSYEADYYGLAGVIHSMLFGKFIETIQLQN---GRCKL-KNPF 945

Query:   289 KRYWKVELWKSLFTNLLNMSSGNDK 313
             KRYWK E+W  +F  LLN    +++
Sbjct:   946 KRYWKKEIWGVIFDLLLNSGQASNQ 970

GO:0006468 "protein phosphorylation" evidence=IEA;IDA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0016740 "transferase activity" evidence=IEA

GO:0007049 "cell cycle" evidence=IEA

GO:0005634 "nucleus" evidence=IEA;IDA

GO:0000166 "nucleotide binding" evidence=IEA

GO:0034501 "protein localization to kinetochore" evidence=IMP

GO:0000778 "condensed nuclear chromosome kinetochore" evidence=IDA

GO:0004672 "protein kinase activity" evidence=IEA;IDA

GO:0000075 "cell cycle checkpoint" evidence=IEA

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0000780 "condensed nuclear chromosome, centromeric region" evidence=IDA

GO:0005524 "ATP binding" evidence=IEA

GO:0007094 "mitotic spindle assembly checkpoint" evidence=IMP

GO:0031134 "sister chromatid biorientation" evidence=IMP

GO:0016310 "phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=IEA

GO:0005515 "protein binding" evidence=IPI

GO:0000776 "kinetochore" evidence=IDA

UNIPROTKB|F1NDM5 BUB1 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 476 (172.6 bits), Expect = 3.5e-44, P = 3.5e-44
 Identities = 110/305 (36%), Positives = 166/305 (54%)

Query:    43 IEIGGKKYQIKGCAGQGGFAKVFKAYV-NG-DPED--VVALKIQKPAFPWEFYMYRQLDQ 98
             + +G     +    G+G FA+V++A V N  DP     V  K+QKPA PWEFY+  QL +
Sbjct:   780 LHLGSLSVCVDSLVGEGAFAQVYQASVLNASDPRSNQKVIFKVQKPANPWEFYIATQLVE 839

Query:    99 RISGRERSSFGFAHRIHLYSDYSILVCDYLSQGTLQDAINSYVVIG-KSMEEVLCIYYTI 157
             R+       +   +  H + + SIL+ +  + GTL +AIN Y  +  K M +   IY+ +
Sbjct:   840 RLDPSIHHLYIHLYSAHFFQNGSILIGELYNYGTLLNAINIYKKLPEKVMPQAFVIYFAV 899

Query:   158 EMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSGPWQDQGLCLVDWGRGIDL 217
             ++L ++E LH   IIHGD KPDN ++    D  T    D S      GL L+D G+ ID+
Sbjct:   900 KILHMVEELHSCKIIHGDIKPDNFMLGEFLDNDTCDIDDLS-----HGLTLIDLGQSIDM 954

Query:   218 HLFPDNMEFEGDCRTSGFRCIEMQEKKPWKFQVDTYGLCAIVHMMLHNSYMEIEKKASPD 277
              LFP+   F   C TSGF+CIEM  +KPW +Q D +G+ A V+ ML  +YM+++ ++   
Sbjct:   955 KLFPEGTAFTAKCETSGFQCIEMLTQKPWNYQTDYFGIAATVYCMLFGTYMQVKNESG-- 1012

Query:   278 GGLVYLPKLSFKRYWKVELWKSLFTNLLNMSSGNDKEVLQNLQKSFQDYLC-SNPQLLKN 336
                V+ P+ SF+R    ELWK  F  +LN+ S +    L  L+   +D  C S  + +K 
Sbjct:  1013 ---VWKPEGSFRRLVNAELWKEFFDIMLNIPSCHSLPSLTALRNRLKDLFCKSYAKEIKL 1069

Query:   337 LKELL 341
             L+  L
Sbjct:  1070 LRRRL 1074

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0000777 "condensed chromosome kinetochore" evidence=IEA

GO:0000780 "condensed nuclear chromosome, centromeric region" evidence=IEA

GO:0007063 "regulation of sister chromatid cohesion" evidence=IEA

GO:0071173 "spindle assembly checkpoint" evidence=IEA

UNIPROTKB|A6QLW0 BUB1 "BUB1 protein" [Bos taurus (taxid:9913)]

 Score = 467 (169.5 bits), Expect = 3.2e-43, P = 3.2e-43
 Identities = 115/318 (36%), Positives = 174/318 (54%)

Query:    41 KT-IEIGGKKYQIKGCAGQGGFAKVFKAY---VNGDP-EDVVALKIQKPAFPWEFYMYRQ 95
             KT  ++G     +    GQG FA+V++     VN    ++  ALK+QKP   WEFY+  Q
Sbjct:   769 KTEFQLGSLLVYVDHFIGQGAFAQVYEVTHGDVNNSKNKEKFALKVQKPPNLWEFYIGTQ 828

Query:    96 LDQRISGRERSSFGFAHRIHLYSDYSILVCDYLSQGTLQDAINSYV-VIGKSMEEVLCIY 154
             L +R+    +  F   +  HL+ + S+LV D  S GTL +AIN Y     K M + L + 
Sbjct:   829 LMERLKPSMQHMFIKFYSAHLFQNGSVLVGDLYSYGTLLNAINLYKNTPEKVMPQALVLA 888

Query:   155 YTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSGPWQDQGLCLVDWGRG 214
             + I MLC+++ +HD  IIHGD KPDN ++     E    D D S      GL L+D G+ 
Sbjct:   889 FAIRMLCMIQQVHDCEIIHGDIKPDNFILGNRFLEQDNKDDDLSN-----GLVLIDLGQS 943

Query:   215 IDLHLFPDNMEFEGDCRTSGFRCIEMQEKKPWKFQVDTYGLCAIVHMMLHNSYMEIEKKA 274
             ID+ LFP    F G C TSGF+CIEM   KPW +Q+D +G+ A ++ ML  +YM+++   
Sbjct:   944 IDMKLFPKGTAFTGKCETSGFQCIEMLSNKPWNYQIDYFGVAATIYCMLFGTYMKVKN-- 1001

Query:   275 SPDGGLVYLPKLSFKRYWKVELWKSLFTNLLNMSSGNDKEVL----QNLQKSFQDYLCSN 330
               +GG ++ P+  F+R   +++W   F  +LN+   +    L    Q L+K+FQ++  S 
Sbjct:  1002 --EGG-IWKPEGLFRRLPHLDMWNEFFHIMLNIPDCHHLPSLDLLRQKLKKTFQEHYTSK 1058

Query:   331 PQLLKN-LKELLAKQRAS 347
              + L N L  LL + + S
Sbjct:  1059 IKTLCNRLIVLLLEYKRS 1076

GO:0071173 "spindle assembly checkpoint" evidence=IEA

GO:0007063 "regulation of sister chromatid cohesion" evidence=IEA

GO:0000780 "condensed nuclear chromosome, centromeric region" evidence=IEA

GO:0000777 "condensed chromosome kinetochore" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

ZFIN|ZDB-GENE-081104-75 si:ch1073-192f24.1 "si:ch1073-192f24.1" [Danio rerio (taxid:7955)]

 Score = 463 (168.0 bits), Expect = 1.1e-42, P = 1.1e-42
 Identities = 110/305 (36%), Positives = 165/305 (54%)

Query:    42 TIEIGGKKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFPWEFYMYRQLDQRIS 101
             T++I G+  ++    GQG FA V++A  N      + LK+QKPA PWEFY+  QL++R+ 
Sbjct:   898 TVQIAGESLRVDFVLGQGAFATVYQA-TNLMTTQKLFLKVQKPANPWEFYIDCQLNKRLQ 956

Query:   102 GRERSSFGFAHRIHLYSDYSILVCDYLSQGTLQDAINSYVVIG-KSMEEVLCIYYTIEML 160
               ER  +   H  HL+++ S+LV    + GTL +AIN Y     K M + L +Y+++ +L
Sbjct:   957 PSERHLYNSIHSAHLFNNGSVLVGQLHNCGTLLNAINLYKRRSEKLMPQPLVLYFSVCIL 1016

Query:   161 CILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSGPWQDQGLCLVDWGRGIDLHLF 220
              ++E LH   IIH D KPDN L+     E    D +        GL L+D G+ ID+ LF
Sbjct:  1017 KMVELLHAAHIIHADIKPDNFLLGERFLENDCFDQENL----QHGLALIDLGQSIDMTLF 1072

Query:   221 PDNMEFEGDCRTSGFRCIEMQEKKPWKFQVDTYGLCAIVHMMLHNSYMEIEKKASPDGGL 280
             P+   F   C TSGF+C+EM   +PW +Q D +G+   V+ ML  +YME++++     G 
Sbjct:  1073 PEGTAFTAKCMTSGFQCVEMLSGRPWTYQTDYFGIAGTVYCMLFGTYMEVKQE-----GD 1127

Query:   281 VYLPKLSFKRYWKVELWKSLFTNLLNMSSGNDKEVLQNLQKSFQDYLCSN-PQLLKNLKE 339
             V+     FKR    +LW+  F  LLN+S  +    L  L++     L  N    L++LK 
Sbjct:  1128 VWRTNGVFKRNVHADLWQDFFHTLLNVSDCSAPPCLSVLRQRLHAVLQQNYNSKLRSLKN 1187

Query:   340 LLAKQ 344
              L  Q
Sbjct:  1188 RLVVQ 1192

GO:0004672 "protein kinase activity" evidence=IEA

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
4th Layer	2.7.11.1	0.737
3rd Layer	2.7.11	0.691

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	351
cd00180	215	cd00180, PKc, Catalytic domain of Protein Kinases	3e-15
smart00220	254	smart00220, S_TKc, Serine/Threonine protein kinase	2e-14
pfam00069	260	pfam00069, Pkinase, Protein kinase domain	2e-11
cd05581	280	cd05581, STKc_PDK1, Catalytic domain of the Protei	3e-11
COG0515	384	COG0515, SPS1, Serine/threonine protein kinase [Ge	4e-11
cd06606	260	cd06606, STKc_MAPKKK, Catalytic domain of the Prot	4e-11
cd05579	265	cd05579, STKc_MAST_like, Catalytic domain of Micro	3e-09
cd05122	253	cd05122, PKc_STE, Catalytic domain of STE family P	4e-09
cd06627	254	cd06627, STKc_Cdc7_like, Catalytic domain of Cell	1e-08
cd05573	350	cd05573, STKc_ROCK_NDR_like, Catalytic domain of R	4e-08
cd05118	283	cd05118, STKc_CMGC, Catalytic domain of CMGC famil	5e-08
cd05123	250	cd05123, STKc_AGC, Catalytic domain of AGC family	9e-08
cd05601	330	cd05601, STKc_CRIK, Catalytic domain of the Protei	2e-07
cd05622	371	cd05622, STKc_ROCK1, Catalytic domain of the Prote	2e-07
cd05607	277	cd05607, STKc_GRK7, Catalytic domain of the Protei	3e-07
cd05621	370	cd05621, STKc_ROCK2, Catalytic domain of the Prote	5e-07
cd05610	669	cd05610, STKc_MASTL, Catalytic domain of the Prote	1e-06
cd05611	260	cd05611, STKc_Rim15_like, Catalytic domain of fung	1e-06
cd06626	264	cd06626, STKc_MEKK4, Catalytic domain of the Prote	1e-06
cd05600	333	cd05600, STKc_Sid2p_Dbf2p, Catalytic domain of Fun	1e-06
cd05574	316	cd05574, STKc_phototropin_like, Catalytic domain o	2e-06
cd05598	376	cd05598, STKc_LATS, Catalytic domain of the Protei	4e-06
cd05625	382	cd05625, STKc_LATS1, Catalytic domain of the Prote	6e-06
cd05596	370	cd05596, STKc_ROCK, Catalytic domain of the Protei	6e-06
cd05584	323	cd05584, STKc_p70S6K, Catalytic domain of the Prot	1e-05
cd05632	285	cd05632, STKc_GRK5, Catalytic domain of the Protei	1e-05
PRK14879	211	PRK14879, PRK14879, serine/threonine protein kinas	3e-05
cd05626	381	cd05626, STKc_LATS2, Catalytic domain of the Prote	3e-05
cd06623	264	cd06623, PKc_MAPKK_plant_like, Catalytic domain of	4e-05
cd05597	331	cd05597, STKc_DMPK_like, Catalytic domain of Myoto	6e-05
cd05630	285	cd05630, STKc_GRK6, Catalytic domain of the Protei	1e-04
cd05577	277	cd05577, STKc_GRK, Catalytic domain of the Protein	1e-04
cd05580	290	cd05580, STKc_PKA, Catalytic domain of the Protein	2e-04
cd05585	312	cd05585, STKc_YPK1_like, Catalytic domain of Yeast	3e-04
cd05575	323	cd05575, STKc_SGK, Catalytic domain of the Protein	3e-04
pfam01636	238	pfam01636, APH, Phosphotransferase enzyme family	4e-04
cd07829	282	cd07829, STKc_CDK_like, Catalytic domain of Cyclin	5e-04
cd05609	305	cd05609, STKc_MAST, Catalytic domain of the Protei	5e-04
cd07832	286	cd07832, STKc_CCRK, Catalytic domain of the Serine	6e-04
cd05631	285	cd05631, STKc_GRK4, Catalytic domain of the Protei	6e-04
cd07850	353	cd07850, STKc_JNK, Catalytic domain of the Serine/	6e-04
cd06612	256	cd06612, STKc_MST1_2, Catalytic domain of the Prot	7e-04
cd05608	280	cd05608, STKc_GRK1, Catalytic domain of the Protei	0.001
cd06610	267	cd06610, STKc_OSR1_SPAK, Catalytic domain of the P	0.001
cd05582	318	cd05582, STKc_RSK_N, N-terminal catalytic domain o	0.001
cd05603	321	cd05603, STKc_SGK2, Catalytic domain of the Protei	0.001
cd05605	285	cd05605, STKc_GRK4_like, Catalytic domain of G pro	0.001
cd06608	275	cd06608, STKc_myosinIII_like, Catalytic domain of	0.002
cd05154	223	cd05154, ACAD10_11_like, Acyl-CoA dehydrogenase (A	0.002
cd06647	293	cd06647, STKc_PAK_I, Catalytic domain of the Prote	0.002
cd07879	342	cd07879, STKc_p38delta_MAPK13, Catalytic domain of	0.002
cd06629	272	cd06629, STKc_MAPKKK_Bck1_like, Catalytic domain o	0.002
cd05572	262	cd05572, STKc_cGK_PKG, Catalytic domain of the Pro	0.002
cd06609	274	cd06609, STKc_MST3_like, Catalytic domain of Mamma	0.002
COG3173	321	COG3173, COG3173, Predicted aminoglycoside phospho	0.002
cd07830	283	cd07830, STKc_MAK_like, Catalytic domain of Male g	0.003
cd05628	363	cd05628, STKc_NDR1, Catalytic domain of the Protei	0.003
PRK09605	535	PRK09605, PRK09605, bifunctional UGMP family prote	0.003
cd05629	377	cd05629, STKc_NDR_like_fungal, Catalytic domain of	0.003
cd05578	258	cd05578, STKc_Yank1, Catalytic domain of the Prote	0.003
cd07874	355	cd07874, STKc_JNK3, Catalytic domain of the Serine	0.004
cd05599	364	cd05599, STKc_NDR_like, Catalytic domain of Nuclea	0.004
COG3642	204	COG3642, COG3642, Mn2+-dependent serine/threonine	0.004

>gnl|CDD|173623 cd00180, PKc, Catalytic domain of Protein Kinases

 Score = 73.4 bits (181), Expect = 3e-15
 Identities = 48/221 (21%), Positives = 83/221 (37%), Gaps = 50/221 (22%)

Query: 57  GQGGFAKVFKAYVNGDPEDVVALKIQKP--------AFPWEFYMYRQLD-QRISGRERSS 107
           G+GGF  V+ A      +  VA+KI K             E  + ++L+   I       
Sbjct: 2   GEGGFGTVYLARDKKTGK-KVAIKIIKKEDSSSLLEELLREIEILKKLNHPNI------- 53

Query: 108 FGFAHRIHLY-----SDYSILVCDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCI 162
                 + LY      ++  LV +Y   G+L+D +         + E   +   +++L  
Sbjct: 54  ------VKLYGVFEDENHLYLVMEYCEGGSLKDLLKEN---EGKLSEDEILRILLQILEG 104

Query: 163 LESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSGPWQDQGLCLVDWGRGIDLHLFPD 222
           LE LH  GIIH D KP+N+L+     +                + L D+G    L    D
Sbjct: 105 LEYLHSNGIIHRDLKPENILLDSDNGK----------------VKLADFGLSKLLT--SD 146

Query: 223 NMEFEGDCRTSGFRCIEM-QEKKPWKFQVDTYGLCAIVHMM 262
               +    T  +   E+   K  +  + D + L  I++ +
Sbjct: 147 KSLLKTIVGTPAYMAPEVLLGKGYYSEKSDIWSLGVILYEL 187

Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which one kinase activates a second kinase, which in turn, may act on other kinases; this sequential action transmits a signal from the cell surface to target proteins, which results in cellular responses. The PK family is one of the largest known protein families with more than 100 homologous yeast enzymes and 550 human proteins. A fraction of PK family members are pseudokinases that lack crucial residues for catalytic activity. The mutiplicity of kinases allows for specific regulation according to substrate, tissue distribution, and cellular localization. PKs regulate many cellular processes including proliferation, division, differentiation, motility, survival, metabolism, cell-cycle progression, cytoskeletal rearrangement, immunity, and neuronal functions. Many kinases are implicated in the development of various human diseases including different types of cancer. Length = 215

>gnl|CDD|214567 smart00220, S_TKc, Serine/Threonine protein kinases, catalytic domain

 Score = 71.8 bits (177), Expect = 2e-14
 Identities = 38/142 (26%), Positives = 58/142 (40%), Gaps = 20/142 (14%)

Query: 50  YQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFPWEFYMYRQLDQRISGRERS--- 106
           Y+I    G+G F KV+ A  +     +VA+K+ K     +             RE     
Sbjct: 1   YEILEKLGEGSFGKVYLAR-DKKTGKLVAIKVIKKKKIKKDRERIL-------REIKILK 52

Query: 107 SFGFAHRIHLY-----SDYSILVCDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLC 161
                + + LY      D   LV +Y   G L D +         + E    +Y  ++L 
Sbjct: 53  KLKHPNIVRLYDVFEDEDKLYLVMEYCEGGDLFDLLKKR----GRLSEDEARFYLRQILS 108

Query: 162 ILESLHDVGIIHGDFKPDNLLI 183
            LE LH  GI+H D KP+N+L+
Sbjct: 109 ALEYLHSKGIVHRDLKPENILL 130

Phosphotransferases. Serine or threonine-specific kinase subfamily. Length = 254

>gnl|CDD|215690 pfam00069, Pkinase, Protein kinase domain

 Score = 63.0 bits (154), Expect = 2e-11
 Identities = 40/137 (29%), Positives = 62/137 (45%), Gaps = 9/137 (6%)

Query: 50  YQIKGCAGQGGFAKVFKAYVNGDPEDVVALKI--QKPAFPWEFYMYRQLDQRISGRERSS 107
           Y++    G G F  V+KA   G  + +VA+KI  ++     +    R+ + RI  R    
Sbjct: 1   YELLRKLGSGSFGTVYKAKHKGTGK-IVAVKILKKRSEKSKKDQTARR-EIRILRRLSHP 58

Query: 108 FGFA-HRIHLYSDYSILVCDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESL 166
                       D+  LV +Y   G L D ++    +  S +E   I    ++L  LE L
Sbjct: 59  NIVRLIDAFEDKDHLYLVMEYCEGGDLFDYLSRGGPL--SEDEAKKIAL--QILRGLEYL 114

Query: 167 HDVGIIHGDFKPDNLLI 183
           H  GIIH D KP+N+L+
Sbjct: 115 HSNGIIHRDLKPENILL 131

Length = 260

>gnl|CDD|173672 cd05581, STKc_PDK1, Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1

 Score = 62.6 bits (153), Expect = 3e-11
 Identities = 39/160 (24%), Positives = 59/160 (36%), Gaps = 39/160 (24%)

Query: 123 LVCDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLL 182
            V +Y   G L   I  Y     S++E    +Y  E+L  LE LH  GIIH D KP+N+L
Sbjct: 79  FVLEYAPNGELLQYIRKY----GSLDEKCTRFYAAEILLALEYLHSKGIIHRDLKPENIL 134

Query: 183 IRYARDELTVLDHDRSGPWQDQGLCLVDWGRGIDLHLFPDNMEFEGD------------- 229
           +                  +D  + + D+G    L         +GD             
Sbjct: 135 LD-----------------KDMHIKITDFGTAKVLDPNSSPESNKGDATNIDSQIEKNRR 177

Query: 230 -----CRTSGFRCIEMQEKKPWKFQVDTYGLCAIVHMMLH 264
                  T+ +   E+  +KP     D + L  I++ ML 
Sbjct: 178 RFASFVGTAEYVSPELLNEKPAGKSSDLWALGCIIYQMLT 217

Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to autophosphorylate and is constitutively active in mammalian cells. PDK1 is essential for normal embryo development and is important in regulating cell volume. Length = 280

>gnl|CDD|223589 COG0515, SPS1, Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]

 Score = 63.2 bits (152), Expect = 4e-11
 Identities = 36/151 (23%), Positives = 63/151 (41%), Gaps = 11/151 (7%)

Query: 49  KYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFPWEFYMYRQLDQRISGRERSSF 108
            Y+I    G+G F +V+ A         VALK+       +     +  + I      + 
Sbjct: 1   SYRILRKLGEGSFGEVYLARDRKL----VALKVLAKKLESKSKEVERFLREIQILASLNH 56

Query: 109 GFAHRIHLY-----SDYSILVCDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCIL 163
              + + LY          LV +Y+  G+L+D +         + E   ++   ++L  L
Sbjct: 57  P-PNIVKLYDFFQDEGSLYLVMEYVDGGSLEDLLKKIG-RKGPLSESEALFILAQILSAL 114

Query: 164 ESLHDVGIIHGDFKPDNLLIRYARDELTVLD 194
           E LH  GIIH D KP+N+L+      + ++D
Sbjct: 115 EYLHSKGIIHRDIKPENILLDRDGRVVKLID 145

Length = 384

>gnl|CDD|173724 cd06606, STKc_MAPKKK, Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase

 Score = 62.2 bits (152), Expect = 4e-11
 Identities = 34/145 (23%), Positives = 55/145 (37%), Gaps = 37/145 (25%)

Query: 57  GQGGFAKVFKAYVNGDPEDVVALK--------------IQKPAFPWEFYMYRQLDQ---- 98
           G+G F  V+ A      E ++A+K              +++     E  +   L      
Sbjct: 9   GRGSFGSVYLALDKDTGE-LMAVKSVELSGDSEEELEALER-----EIRILSSLQHPNIV 62

Query: 99  RISGRERSSFGFAHRIHLYSDYSILVCDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIE 158
           R  G ER        I L         +Y+S G+L   +  +      + E +   YT +
Sbjct: 63  RYYGSERDEEKNTLNIFL---------EYVSGGSLSSLLKKF----GKLPEPVIRKYTRQ 109

Query: 159 MLCILESLHDVGIIHGDFKPDNLLI 183
           +L  L  LH  GI+H D K  N+L+
Sbjct: 110 ILEGLAYLHSNGIVHRDIKGANILV 134

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKKK5) and ASK2 (or MAPKKK6), MEKK1, MEKK2, MEKK3, MEKK4, as well as plant and fungal MAPKKKs. Also included in this subfamily are the cell division control proteins Schizosaccharomyces pombe Cdc7 and Saccharomyces cerevisiae Cdc15. Length = 260

>gnl|CDD|173670 cd05579, STKc_MAST_like, Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins

 Score = 56.9 bits (138), Expect = 3e-09
 Identities = 42/138 (30%), Positives = 66/138 (47%), Gaps = 24/138 (17%)

Query: 57  GQGGFAKVFKAYVNGDPEDVVALKIQKPAFPWEFYMYRQLDQRISGRE-----RSSF--- 108
            +G + +VF A       D+ A+K+ K A   +     Q+DQ ++ R+     +S +   
Sbjct: 2   SKGAYGRVFLA-KKKSTGDIYAIKVIKKA---DMIRKNQVDQVLTERDILSQAQSPYVVK 57

Query: 109 ---GFAHRIHLYSDYSILVCDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILES 165
               F  + +LY     LV +YL  G L   + +      S++E +   Y  E++  LE 
Sbjct: 58  LYYSFQGKKNLY-----LVMEYLPGGDLASLLENV----GSLDEDVARIYIAEIVLALEY 108

Query: 166 LHDVGIIHGDFKPDNLLI 183
           LH  GIIH D KPDN+LI
Sbjct: 109 LHSNGIIHRDLKPDNILI 126

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert relative to other kinases. The fungal kinases in this subfamily harbor other domains in addition to a central catalytic domain, which also contains an insert relative to MAST kinases like MASTL. Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. MAST kinases are cytoskeletal associated kinases of unknown function that are also expressed at neuromuscular junctions and postsynaptic densities. The fungal proteins Rim15 and cek1 are involved in the regulation of meiosis and mitosis, respectively. Length = 265

>gnl|CDD|173659 cd05122, PKc_STE, Catalytic domain of STE family Protein Kinases

 Score = 56.4 bits (137), Expect = 4e-09
 Identities = 37/139 (26%), Positives = 65/139 (46%), Gaps = 12/139 (8%)

Query: 49  KYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFPWEFYMYRQLDQRISGRE--RS 106
            ++I    G+GGF +V+KA      +  VA+K+ K     +     ++   I   +  + 
Sbjct: 1   LFEILEKIGKGGFGEVYKARHKRTGK-EVAIKVIKLESKEK---KEKIINEIQILKKCKH 56

Query: 107 SF--GFAHRIHLYSDYSILVCDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILE 164
                + +  +L  D   +V ++ S G+L+D + S     +++ E    Y   E+L  LE
Sbjct: 57  PNIVKY-YGSYLKKDELWIVMEFCSGGSLKDLLKST---NQTLTESQIAYVCKELLKGLE 112

Query: 165 SLHDVGIIHGDFKPDNLLI 183
            LH  GIIH D K  N+L+
Sbjct: 113 YLHSNGIIHRDIKAANILL 131

Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and activated by a MAPKK, which itself is phosphorylated and activated by a MAPKKK. Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAPKKK to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. Other STE family members include p21-activated kinases (PAKs) and class III myosins, among others. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain, which can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, as well as autophosphorylate the C-terminal motor domain. They play an important role in maintaining the structural integrity of photoreceptor cell microvilli. Length = 253

>gnl|CDD|173731 cd06627, STKc_Cdc7_like, Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases

 Score = 54.9 bits (133), Expect = 1e-08
 Identities = 39/150 (26%), Positives = 58/150 (38%), Gaps = 33/150 (22%)

Query: 49  KYQIKGCAGQGGFAKVFKAYVNGDPEDVVALK-IQKPAFPWEFYMYRQLDQRIS------ 101
            YQ+    G+G F  V+K  +N +  D VA+K I       E      + Q I       
Sbjct: 1   NYQLGDLIGRGAFGVVYKG-LNLETGDFVAIKQISLEKIKEEALK--SIMQEIDLLKNLK 57

Query: 102 --------GRERSSFGFAHRIHLYSDYSILVCDYLSQGTLQDAINSYVVIGKSMEEVLCI 153
                   G   +S        LY     ++ +Y   G+L+  I  +   G    E L  
Sbjct: 58  HPNIVKYIGSIETSD------SLY-----IILEYAENGSLRQIIKKF---GP-FPESLVA 102

Query: 154 YYTIEMLCILESLHDVGIIHGDFKPDNLLI 183
            Y  ++L  L  LH+ G+IH D K  N+L 
Sbjct: 103 VYVYQVLQGLAYLHEQGVIHRDIKAANILT 132

Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast Cdc7 is essential for cell division by playing a key role in the initiation of septum formation and cytokinesis. Budding yeast Cdc15 functions to coordinate mitotic exit with cytokinesis. Arabidopsis MAPKKK epsilon is required for pollen development in the plasma membrane. Length = 254

>gnl|CDD|173664 cd05573, STKc_ROCK_NDR_like, Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases

 Score = 53.8 bits (130), Expect = 4e-08
 Identities = 36/135 (26%), Positives = 59/135 (43%), Gaps = 18/135 (13%)

Query: 57  GQGGFAKVFKAYVNGDPEDVVALKIQKPAFPWEFYMYRQLDQRISGRERSSFGFAHR--- 113
           G+G F +V+      D   V A+K+ +     +  M ++        ER     A     
Sbjct: 10  GRGAFGEVWLVRDK-DTGQVYAMKVLR-----KSDMIKRNQIAHVRAERDILADADSPWI 63

Query: 114 IHLY-----SDYSILVCDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHD 168
           + LY      ++  LV +Y+  G L + +    V      E    +Y  E++  L+S+H 
Sbjct: 64  VKLYYSFQDEEHLYLVMEYMPGGDLMNLLIRKDVF----PEETARFYIAELVLALDSVHK 119

Query: 169 VGIIHGDFKPDNLLI 183
           +G IH D KPDN+LI
Sbjct: 120 LGFIHRDIKPDNILI 134

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Proteins in this subfamily are involved in regulating many cellular functions including contraction, motility, division, proliferation, apoptosis, morphogenesis, and cytokinesis. Length = 350

>gnl|CDD|143333 cd05118, STKc_CMGC, Catalytic domain of CMGC family Serine/Threonine Kinases

 Score = 53.1 bits (128), Expect = 5e-08
 Identities = 40/150 (26%), Positives = 60/150 (40%), Gaps = 35/150 (23%)

Query: 50  YQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFPWEFYMYRQLDQRISGRERSSFG 109
           YQ  G  G+G +  V+KA      E +VA+K  K  F        +   + + RE     
Sbjct: 1   YQKLGKIGEGTYGVVYKARDKLTGE-IVAIKKIKLRF------ESEGIPKTALREIKLLK 53

Query: 110 -------------FAHRIHLYSDYSILVCDYLSQGTLQDAINSYVVI---GKSMEEVLCI 153
                        F H+  LY     LV +++         + Y +I    + + E L  
Sbjct: 54  ELNHPNIIKLLDVFRHKGDLY-----LVFEFMDT-------DLYKLIKDRQRGLPESLIK 101

Query: 154 YYTIEMLCILESLHDVGIIHGDFKPDNLLI 183
            Y  ++L  L   H  GI+H D KP+NLLI
Sbjct: 102 SYLYQLLQGLAFCHSHGILHRDLKPENLLI 131

Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Length = 283

>gnl|CDD|173660 cd05123, STKc_AGC, Catalytic domain of AGC family Protein Serine/Threonine Kinases

 Score = 52.1 bits (126), Expect = 9e-08
 Identities = 62/275 (22%), Positives = 96/275 (34%), Gaps = 72/275 (26%)

Query: 57  GQGGFAKVFKAYVNGDPEDVVALKIQKPAFPWEFYMYRQLDQ-----RISGRERSSF--- 108
           G+G F KV           + A+K+ K     +    ++++       I  R    F   
Sbjct: 2   GKGSFGKVLLVRKKDT-GKLYAMKVLKKK---KIIKRKEVEHTLTERNILSRINHPFIVK 57

Query: 109 ---GFAHRIHLYSDYSILVCDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILES 165
               F     LY     LV +Y   G L   ++       S E     +Y  E++  LE 
Sbjct: 58  LHYAFQTEEKLY-----LVLEYAPGGELFSHLSKEGRF--SEERAR--FYAAEIVLALEY 108

Query: 166 LHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSGPWQDQG-LCLVDWGRGIDL--HLFPD 222
           LH +GII+ D KP+N+L          LD D        G + L D+G    L   L  +
Sbjct: 109 LHSLGIIYRDLKPENIL----------LDAD--------GHIKLTDFG----LAKELSSE 146

Query: 223 NMEFEGDCRTSGFRCIEMQEKKPWKFQVDTYGLCAIVHMML--------HNS---YMEIE 271
                  C T  +   E+   K +   VD + L  +++ ML         +    Y +I 
Sbjct: 147 GSRTNTFCGTPEYLAPEVLLGKGYGKAVDWWSLGVLLYEMLTGKPPFYAEDRKEIYEKIL 206

Query: 272 KKASPDGGLVYLPKLSFKRYWKVELWKSLFTNLLN 306
           K             L F  +   E  + L + LL 
Sbjct: 207 KD-----------PLRFPEFLSPEA-RDLISGLLQ 229

Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the turn motif. Phosphorylation at the A-loop is required of most AGC kinases, which results in a disorder-to-order transition of the A-loop. The ordered conformation results in the access of substrates and ATP to the active site. A subset of AGC kinases with C-terminal extensions containing the HM also requires phosphorylation at this site. Phosphorylation at the HM allows the C-terminal extension to form an ordered structure that packs into the hydrophobic pocket of the catalytic domain, which then reconfigures the kinase into an active bi-lobed state. In addition, growth factor-activated AGC kinases such as PKB, p70S6K, RSK, MSK, PKC, and SGK, require phosphorylation at the turn motif (also called tail or zipper site), located N-terminal to the HM at the C-terminal extension. AGC kinases regulate many cellular processes including division, growth, survival, metabolism, motility, and differentiation. Many are implicated in the development of various human diseases. Length = 250

>gnl|CDD|173692 cd05601, STKc_CRIK, Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase

 Score = 51.4 bits (123), Expect = 2e-07
 Identities = 36/144 (25%), Positives = 65/144 (45%), Gaps = 17/144 (11%)

Query: 48  KKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPA--FPWEFYMYRQLDQRISGRER 105
           K + +K   G+G F +V +        D+ A+K+ K +     E   + + ++ I     
Sbjct: 1   KDFDVKSLVGRGHFGEV-QVVREKATGDIYAMKVMKKSVLLAQETVSFFEEERDILSISN 59

Query: 106 S------SFGFAHRIHLYSDYSILVCDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEM 159
           S       + F  + +LY     LV +Y   G L   +N Y       +E +  +Y  E+
Sbjct: 60  SPWIPQLQYAFQDKDNLY-----LVMEYQPGGDLLSLLNRYEDQ---FDEDMAQFYLAEL 111

Query: 160 LCILESLHDVGIIHGDFKPDNLLI 183
           +  + S+H +G +H D KP+N+LI
Sbjct: 112 VLAIHSVHQMGYVHRDIKPENVLI 135

Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnormal cytokinesis and massive apoptosis in neuronal precursors. A Down syndrome critical region protein TTC3 interacts with CRIK and inhibits CRIK-dependent neuronal differentiation and neurite extension. Length = 330

>gnl|CDD|173712 cd05622, STKc_ROCK1, Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1

 Score = 51.6 bits (123), Expect = 2e-07
 Identities = 47/205 (22%), Positives = 91/205 (44%), Gaps = 20/205 (9%)

Query: 41  KTIEIGGKKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFPWEFYMYRQLDQRI 100
           + + +  + Y++    G+G F +V +   +     V A+K+       +F M ++ D   
Sbjct: 36  RDLRMKAEDYEVVKVIGRGAFGEV-QLVRHKSTRKVYAMKLLS-----KFEMIKRSDSAF 89

Query: 101 SGRERSSFGFAHR---IHLY-----SDYSILVCDYLSQGTLQDAINSYVVIGKSMEEVLC 152
              ER    FA+    + L+       Y  +V +Y+  G L + +++Y V  K       
Sbjct: 90  FWEERDIMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSNYDVPEKWAR---- 145

Query: 153 IYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSGPWQDQGLCLVDWG 212
            +YT E++  L+++H +G IH D KPDN+L+  +   L + D         +G+   D  
Sbjct: 146 -FYTAEVVLALDAIHSMGFIHRDVKPDNMLLDKS-GHLKLADFGTCMKMNKEGMVRCDTA 203

Query: 213 RGIDLHLFPDNMEFEGDCRTSGFRC 237
            G   ++ P+ ++ +G     G  C
Sbjct: 204 VGTPDYISPEVLKSQGGDGYYGREC 228

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, and kidney. It mediates signaling from Rho to the actin cytoskeleton. It is implicated in the development of cardiac fibrosis, cardiomyocyte apoptosis, and hyperglycemia. Mice deficient with ROCK1 display eyelids open at birth (EOB) and omphalocele phenotypes due to the disorganization of actin filaments in the eyelids and the umbilical ring. Length = 371

>gnl|CDD|173698 cd05607, STKc_GRK7, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7

 Score = 50.7 bits (121), Expect = 3e-07
 Identities = 41/158 (25%), Positives = 73/158 (46%), Gaps = 30/158 (18%)

Query: 107 SFGFAHRIHLYSDYSILVCDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESL 166
           ++ F  + HL      LV   ++ G L+  I +    G  ME V  I+Y+ ++ C +  L
Sbjct: 59  AYAFESKTHL-----CLVMSLMNGGDLKYHIYNVGERGLEMERV--IHYSAQITCGILHL 111

Query: 167 HDVGIIHGDFKPDNLLIRYARDELTVLDHDRSGPWQDQGLC-LVDWGRGIDLHLFPDNME 225
           H + I++ D KP+N+L+                   DQG C L D G  ++L    D   
Sbjct: 112 HSMDIVYRDMKPENVLL------------------DDQGNCRLSDLGLAVEL---KDGKT 150

Query: 226 FEGDCRTSGFRCIEMQEKKPWKFQVDTYGL-CAIVHMM 262
                 T+G+   E+ +++P+ + VD + + C+I  M+
Sbjct: 151 ITQRAGTNGYMAPEILKEEPYSYPVDWFAMGCSIYEMV 188

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual group of GRKs. It is primarily found in the retina and plays a role in the regulation of opsin light receptors. GRK7 is located in retinal cone outer segments and plays an important role in regulating photoresponse of the cones. Length = 277

>gnl|CDD|173711 cd05621, STKc_ROCK2, Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2

 Score = 50.4 bits (120), Expect = 5e-07
 Identities = 47/205 (22%), Positives = 92/205 (44%), Gaps = 20/205 (9%)

Query: 41  KTIEIGGKKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFPWEFYMYRQLDQRI 100
           + +++  + Y +    G+G F +V +   +   + V A+K+       +F M ++ D   
Sbjct: 36  RKLQMKAEDYDVVKVIGRGAFGEV-QLVRHKSSQKVYAMKLLS-----KFEMIKRSDSAF 89

Query: 101 SGRERSSFGFAHR---IHLY-----SDYSILVCDYLSQGTLQDAINSYVVIGKSMEEVLC 152
              ER    FA+    + L+       Y  +V +Y+  G L + +++Y V      E   
Sbjct: 90  FWEERDIMAFANSPWVVQLFCAFQDDKYLYMVMEYMPGGDLVNLMSNYDV-----PEKWA 144

Query: 153 IYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSGPWQDQGLCLVDWG 212
            +YT E++  L+++H +G+IH D KPDN+L+      L + D        + G+   D  
Sbjct: 145 KFYTAEVVLALDAIHSMGLIHRDVKPDNMLLD-KHGHLKLADFGTCMKMDETGMVRCDTA 203

Query: 213 RGIDLHLFPDNMEFEGDCRTSGFRC 237
            G   ++ P+ ++ +G     G  C
Sbjct: 204 VGTPDYISPEVLKSQGGDGYYGREC 228

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found to play a role in stress fiber and focal adhesion formation. It is prominently expressed in the brain, heart, and skeletal muscles. It is implicated in vascular and neurological disorders, such as hypertension and vasospasm of the coronary and cerebral arteries. ROCK2 is also activated by caspase-2 cleavage, resulting in thrombin-induced microparticle generation in response to cell activation. Mice deficient in ROCK2 show intrauterine growth retardation and embryonic lethality because of placental dysfunction. Length = 370

>gnl|CDD|173701 cd05610, STKc_MASTL, Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase

 Score = 49.9 bits (119), Expect = 1e-06
 Identities = 44/145 (30%), Positives = 64/145 (44%), Gaps = 40/145 (27%)

Query: 58  QGGFAKVFKAYVNGDPEDVVALKIQKPAFPWEFYMYRQLDQRISGRE-----RSSFGFAH 112
           +G F KV+      + + + A+K+ K A   +      + Q  + R+     +S F    
Sbjct: 14  RGAFGKVYLGRKKNNSK-LYAVKVVKKA---DMINKNMVHQVQAERDALALSKSPF---- 65

Query: 113 RIHLYSDYSILVCDYLSQGTLQDAINSYVV----IGKSMEEVLCIY----------YTIE 158
            +HLY  YS           LQ A N Y+V    IG  ++ +L IY          Y  E
Sbjct: 66  IVHLY--YS-----------LQSANNVYLVMEYLIGGDVKSLLHIYGYFDEEMAVKYISE 112

Query: 159 MLCILESLHDVGIIHGDFKPDNLLI 183
           +   L+ LH  GIIH D KPDN+LI
Sbjct: 113 VALALDYLHRHGIIHRDLKPDNMLI 137

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ14813 is associated with autosomal dominant thrombocytopenia. To date, the function of MASTL is unknown. Length = 669

>gnl|CDD|173702 cd05611, STKc_Rim15_like, Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases

 Score = 48.6 bits (116), Expect = 1e-06
 Identities = 26/65 (40%), Positives = 34/65 (52%), Gaps = 4/65 (6%)

Query: 119 DYSILVCDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKP 178
           DY  LV +YL+ G     I     +G   E+     Y  E++  +E LH  GIIH D KP
Sbjct: 70  DYLYLVMEYLNGGDCASLIK---TLGGLPEDWAK-QYIAEVVLGVEDLHQRGIIHRDIKP 125

Query: 179 DNLLI 183
           +NLLI
Sbjct: 126 ENLLI 130

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a downstream effector of PKA and regulates entry into stationary phase (G0). Thus, it plays a crucial role in regulating yeast proliferation, differentiation, and aging. Cek1 may facilitate progression of mitotic anaphase. Length = 260

>gnl|CDD|132957 cd06626, STKc_MEKK4, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4

 Score = 48.5 bits (116), Expect = 1e-06
 Identities = 38/138 (27%), Positives = 64/138 (46%), Gaps = 25/138 (18%)

Query: 57  GQGGFAKVFKAYVNGDPEDVVALK---IQKPAFPWEFYMYRQLDQRISGRER-------S 106
           G G F KV+ A VN D  +++A+K   IQ           +++   +   E         
Sbjct: 9   GGGTFGKVYTA-VNLDTGELMAVKEIRIQDNDPK----TIKEIADEMKVLELLKHPNLVK 63

Query: 107 SFGF-AHRIHLYSDYSILVCDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILES 165
            +G   HR  +Y     +  +Y S GTL++ +      G+ ++E +   YT+++L  L  
Sbjct: 64  YYGVEVHREKVY-----IFMEYCSGGTLEELLEH----GRILDEHVIRVYTLQLLEGLAY 114

Query: 166 LHDVGIIHGDFKPDNLLI 183
           LH  GI+H D KP N+ +
Sbjct: 115 LHSHGIVHRDIKPANIFL 132

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4/MKK7 and MKK3/MKK6. JNK and p38 are collectively known as stress-activated MAPKs, as they are activated in response to a variety of environmental stresses and pro-inflammatory cytokines. MEKK4 also plays roles in the re-polarization of the actin cytoskeleton in response to osmotic stress, in the proper closure of the neural tube, in cardiovascular development, and in immune responses. Length = 264

>gnl|CDD|173691 cd05600, STKc_Sid2p_Dbf2p, Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases

 Score = 48.9 bits (117), Expect = 1e-06
 Identities = 41/145 (28%), Positives = 67/145 (46%), Gaps = 20/145 (13%)

Query: 48  KKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFPWEFYMYRQLDQRISGRERSS 107
           K +QI    GQGG+ +VF A    D  ++VALK  K +  ++    R +       ER  
Sbjct: 1   KDFQILTQVGQGGYGQVFLAK-KKDTGEIVALKRMKKSLLFKLNEVRHVLT-----ERDI 54

Query: 108 FGFAH-----RIHLYS----DYSILVCDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIE 158
                     ++ LY+    +Y  L  +Y+  G  +  +N+       + E    +Y  E
Sbjct: 55  LTTTKSEWLVKL-LYAFQDDEYLYLAMEYVPGGDFRTLLNNL----GVLSEDHARFYMAE 109

Query: 159 MLCILESLHDVGIIHGDFKPDNLLI 183
           M   +++LH++G IH D KP+N LI
Sbjct: 110 MFEAVDALHELGYIHRDLKPENFLI 134

Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis. Dbf2p is important in regulating the mitotic exit network (MEN) and in cytokinesis. Length = 333

>gnl|CDD|173665 cd05574, STKc_phototropin_like, Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases

 Score = 48.4 bits (116), Expect = 2e-06
 Identities = 26/75 (34%), Positives = 37/75 (49%), Gaps = 7/75 (9%)

Query: 115 HLY-----SDYSILVCDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDV 169
            LY       Y  LV DY   G L   +      GK + E +  +Y  E+L  LE LH +
Sbjct: 65  TLYASFQTETYLCLVMDYCPGGELFRLLQRQP--GKCLSEEVARFYAAEVLLALEYLHLL 122

Query: 170 GIIHGDFKPDNLLIR 184
           GI++ D KP+N+L+ 
Sbjct: 123 GIVYRDLKPENILLH 137

Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-terminal photosensory domain and a C-terminal catalytic domain. The N-terminal domain contains two LOV (Light, Oxygen or Voltage) domains that binds FMN. Photoexcitation of the LOV domains results in autophosphorylation at multiple sites and activation of the catalytic domain. Neurospora crassa nrc-2 plays a role in growth and development by controlling entry into the conidiation program. Length = 316

>gnl|CDD|173689 cd05598, STKc_LATS, Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor

 Score = 47.9 bits (114), Expect = 4e-06
 Identities = 33/100 (33%), Positives = 46/100 (46%), Gaps = 19/100 (19%)

Query: 108 FGFAHRIHLYSDYSILVCDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLH 167
           + F  + +LY      V DY+  G +     S ++     EE L  +Y  E+ C +ES+H
Sbjct: 68  YSFQDKDNLY-----FVMDYIPGGDMM----SLLIRLGIFEEDLARFYIAELTCAIESVH 118

Query: 168 DVGIIHGDFKPDNLLIRYARDELTVLDHDRSGPWQDQGLC 207
            +G IH D KPDN+LI          D D      D GLC
Sbjct: 119 KMGFIHRDIKPDNILI----------DRDGHIKLTDFGLC 148

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Length = 376

>gnl|CDD|173714 cd05625, STKc_LATS1, Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1

 Score = 47.3 bits (112), Expect = 6e-06
 Identities = 34/103 (33%), Positives = 48/103 (46%), Gaps = 19/103 (18%)

Query: 105 RSSFGFAHRIHLYSDYSILVCDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILE 164
           R  + F  + +LY      V DY+  G   D ++  + +G    E L  +Y  E+ C +E
Sbjct: 65  RLYYSFQDKDNLY-----FVMDYIPGG---DMMSLLIRMG-IFPEDLARFYIAELTCAVE 115

Query: 165 SLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSGPWQDQGLC 207
           S+H +G IH D KPDN+LI          D D      D GLC
Sbjct: 116 SVHKMGFIHRDIKPDNILI----------DRDGHIKLTDFGLC 148

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype and poor prognosis. LATS1 induces G2 arrest and promotes cytokinesis. It may be a component of the mitotic exit network in higher eukaryotes. Length = 382

>gnl|CDD|173687 cd05596, STKc_ROCK, Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase

 Score = 47.5 bits (113), Expect = 6e-06
 Identities = 36/151 (23%), Positives = 72/151 (47%), Gaps = 19/151 (12%)

Query: 41  KTIEIGGKKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFPWEFYMYRQLDQRI 100
             + +  + + +    G+G F +V +   +   + V A+K+       +F M ++ D   
Sbjct: 36  TKLRMKAEDFDVIKVIGRGAFGEV-QLVRHKSSKQVYAMKLLS-----KFEMIKRSDSAF 89

Query: 101 SGRERSSFGFAH-----RIHL-YSD--YSILVCDYLSQGTLQDAINSYVVIGKSMEEVLC 152
              ER     A+     ++H  + D  Y  +V +Y+  G L + +++Y +      E   
Sbjct: 90  FWEERDIMAHANSEWIVQLHYAFQDDKYLYMVMEYMPGGDLVNLMSNYDI-----PEKWA 144

Query: 153 IYYTIEMLCILESLHDVGIIHGDFKPDNLLI 183
            +YT E++  L+++H +G IH D KPDN+L+
Sbjct: 145 RFYTAEVVLALDAIHSMGFIHRDVKPDNMLL 175

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via interaction with Rho GTPases and is involved in many cellular functions including contraction, adhesion, migration, motility, proliferation, and apoptosis. The ROCK subfamily consists of two isoforms, ROCK1 and ROCK2, which may be functionally redundant in some systems, but exhibit different tissue distributions. Both isoforms are ubiquitously expressed in most tissues, but ROCK2 is more prominent in brain and skeletal muscle while ROCK1 is more pronounced in the liver, testes, and kidney. Studies in knockout mice result in different phenotypes, suggesting that the two isoforms do not compensate for each other during embryonic development. Length = 370

>gnl|CDD|173675 cd05584, STKc_p70S6K, Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase

 Score = 46.3 bits (110), Expect = 1e-05
 Identities = 52/185 (28%), Positives = 73/185 (39%), Gaps = 38/185 (20%)

Query: 57  GQGGFAKVFKAYVN--GDPEDVVALKIQKPAFPWEFYMYRQLDQRISGRERS-------- 106
           G+GG+ KVF+       D   + A+K+ K A      +  Q D   +  ER+        
Sbjct: 5   GKGGYGKVFQVRKVTGADTGKIFAMKVLKKAT----IVRNQKDTAHTKAERNILEAVKHP 60

Query: 107 -----SFGFAHRIHLYSDYSILVCDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLC 161
                 + F     LY     L+ +YLS G L   +      G  ME+  C Y + E+  
Sbjct: 61  FIVDLIYAFQTGGKLY-----LILEYLSGGELFMHLERE---GIFMEDTACFYLS-EISL 111

Query: 162 ILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSGPWQDQGLCLVDWGRGIDLHLFP 221
            LE LH  GII+ D KP+N+L          LD        D GLC      G   H F 
Sbjct: 112 ALEHLHQQGIIYRDLKPENIL----------LDAQGHVKLTDFGLCKESIHEGTVTHTFC 161

Query: 222 DNMEF 226
             +E+
Sbjct: 162 GTIEY 166

Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the insulin receptor substrate IRS-1, among others. Mammals contain two isoforms of p70S6K, named S6K1 and S6K2 (or S6K-beta). Length = 323

>gnl|CDD|173721 cd05632, STKc_GRK5, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5

 Score = 46.1 bits (109), Expect = 1e-05
 Identities = 38/170 (22%), Positives = 70/170 (41%), Gaps = 25/170 (14%)

Query: 94  RQLDQRISGRERSSFGFAHRIHLYSDYSILVCDYLSQGTLQDAINSYVVIGKSMEEVLCI 153
           +Q+ ++++ +   +  +A+      D   LV   ++ G L+  I  Y +     EE   +
Sbjct: 51  KQILEKVNSQFVVNLAYAYET---KDALCLVLTIMNGGDLKFHI--YNMGNPGFEEERAL 105

Query: 154 YYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSGPWQDQGLCLVDWGR 213
           +Y  E+LC LE LH    ++ D KP+N+L          LD        D GL +     
Sbjct: 106 FYAAEILCGLEDLHRENTVYRDLKPENIL----------LDDYGHIRISDLGLAVK---- 151

Query: 214 GIDLHLFPDNMEFEGDCRTSGFRCIEMQEKKPWKFQVDTYGLCAIVHMML 263
                  P+     G   T G+   E+   + +    D +GL  +++ M+
Sbjct: 152 ------IPEGESIRGRVGTVGYMAPEVLNNQRYTLSPDYWGLGCLIYEMI 195

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with the membrane though an N-terminal PIP2 binding domain and also binds phospholipids via its C-terminus. GRK5 deficiency is associated with early Alzheimer's disease in humans and mouse models. GRK5 also plays a crucial role in the pathogenesis of sporadic Parkinson's disease. It participates in the regulation and desensitization of PDGFRbeta, a receptor tyrosine kinase involved in a variety of downstream cellular effects including cell growth, chemotaxis, apoptosis, and angiogenesis. GRK5 also regulates Toll-like receptor 4, which is involved in innate and adaptive immunity. Length = 285

>gnl|CDD|237847 PRK14879, PRK14879, serine/threonine protein kinase; Provisional

 Score = 44.1 bits (105), Expect = 3e-05
 Identities = 44/193 (22%), Positives = 73/193 (37%), Gaps = 59/193 (30%)

Query: 57  GQGGFAKVFKAYVNGDPEDVVALKIQKPAFPWEFYMYRQLDQRISGRERS---------- 106
            +G  A+++     G     V +K + P    + Y + +LD+RI  RER+          
Sbjct: 5   KRGAEAEIYLGDFLG--IKAV-IKWRIP----KRYRHPELDERIR-RERTRREARIMSRA 56

Query: 107 -SFGFAHRIHLYSDYS--ILVCDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTI-EMLCI 162
              G       + D    I+V +Y+    L+D INS         E L +   I  ++  
Sbjct: 57  RKAGVNVPAVYFVDPENFIIVMEYIEGEPLKDLINSN------GMEELELSREIGRLVGK 110

Query: 163 LESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSGPWQDQGLCLVDWG---------- 212
           L   H  GIIHGD    N+++                      + L+D+G          
Sbjct: 111 L---HSAGIIHGDLTTSNMILS------------------GGKIYLIDFGLAEFSKDLED 149

Query: 213 RGIDLHLFPDNME 225
           R +DLH+   ++E
Sbjct: 150 RAVDLHVLLRSLE 162

Length = 211

>gnl|CDD|173715 cd05626, STKc_LATS2, Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2

 Score = 45.0 bits (106), Expect = 3e-05
 Identities = 26/76 (34%), Positives = 40/76 (52%), Gaps = 9/76 (11%)

Query: 108 FGFAHRIHLYSDYSILVCDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLH 167
           + F  + +LY      V DY+  G +     S ++  +   EVL  +Y  E+   +ES+H
Sbjct: 68  YSFQDKDNLY-----FVMDYIPGGDMM----SLLIRMEVFPEVLARFYIAELTLAIESVH 118

Query: 168 DVGIIHGDFKPDNLLI 183
            +G IH D KPDN+LI
Sbjct: 119 KMGFIHRDIKPDNILI 134

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with poor prognosis in acute lymphoblastic leukemia and breast cancer. Length = 381

>gnl|CDD|132954 cd06623, PKc_MAPKK_plant_like, Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins

 Score = 44.5 bits (106), Expect = 4e-05
 Identities = 34/137 (24%), Positives = 55/137 (40%), Gaps = 11/137 (8%)

Query: 51  QIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFPWEFYMYRQLDQRISGRERSSFGF 110
           +     GQG    V+K   +     + ALK        +    +QL + +         +
Sbjct: 4   ERVKVLGQGSSGVVYKV-RHKPTGKIYALKKIH--VDGDEEFRKQLLRELKTLRSCESPY 60

Query: 111 AHRIH--LYSDYSI-LVCDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLH 167
             + +   Y +  I +V +Y+  G+L D +     I     E +  Y   ++L  L+ LH
Sbjct: 61  VVKCYGAFYKEGEISIVLEYMDGGSLADLLKKVGKIP----EPVLAYIARQILKGLDYLH 116

Query: 168 -DVGIIHGDFKPDNLLI 183
               IIH D KP NLLI
Sbjct: 117 TKRHIIHRDIKPSNLLI 133

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include MAPKKs from plants, kinetoplastids, alveolates, and mycetozoa. The MAPKK, LmxPK4, from Leishmania mexicana, is important in differentiation and virulence. Dictyostelium discoideum MEK1 is required for proper chemotaxis. MEK1 null mutants display severe defects in cell polarization and directional movement. Plants contain multiple MAPKKs like other eukaryotes. The Arabidopsis genome encodes for 10 MAPKKs while poplar and rice contain 13 MAPKKs each. The functions of these proteins have not been fully elucidated. There is evidence to suggest that MAPK cascades are involved in plant stress responses. In Arabidopsis, MKK3 plays a role in pathogen signaling, MKK2 is involved in cold and salt stress signaling, MKK4/MKK5 participates in innate immunity, and MKK7 regulates basal and systemic acquired resistance. Length = 264

>gnl|CDD|173688 cd05597, STKc_DMPK_like, Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases

 Score = 44.0 bits (104), Expect = 6e-05
 Identities = 23/76 (30%), Positives = 39/76 (51%), Gaps = 8/76 (10%)

Query: 108 FGFAHRIHLYSDYSILVCDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLH 167
           + F    +LY     LV DY   G L   ++ +      + E +  +Y  EM+  ++S+H
Sbjct: 68  YAFQDENNLY-----LVMDYYVGGDLLTLLSKF---EDRLPEDMARFYLAEMVLAIDSVH 119

Query: 168 DVGIIHGDFKPDNLLI 183
            +G +H D KPDN+L+
Sbjct: 120 QLGYVHRDIKPDNVLL 135

Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy, and cardiac conduction defects. The genetic basis for DM1 is the mutational expansion of a CTG repeat in the 3'-UTR of DMPK. DMPK is expressed in skeletal and cardiac muscles, and in central nervous tissues. The functional role of DMPK is not fully understood. It may play a role in the signal transduction and homeostasis of calcium. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKgamma is expressed in heart and skeletal muscles, unlike MRCKalpha and MRCKbeta, which are expressed ubiquitously. Length = 331

>gnl|CDD|173719 cd05630, STKc_GRK6, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6

 Score = 43.1 bits (101), Expect = 1e-04
 Identities = 45/181 (24%), Positives = 77/181 (42%), Gaps = 26/181 (14%)

Query: 94  RQLDQRISGRERSSFGFAHRIHLYSDYSILVCDYLSQGTLQDAINSYVVIGKSMEEVLCI 153
           +Q+ ++++ R   S  +A+      D   LV   ++ G L+  I  Y +     EE   +
Sbjct: 51  KQILEKVNSRFVVSLAYAYET---KDALCLVLTLMNGGDLKFHI--YHMGEAGFEEGRAV 105

Query: 154 YYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSGPWQDQGLCLVDWGR 213
           +Y  E+ C LE LH   I++ D KP+N+L          LD        D GL       
Sbjct: 106 FYAAEICCGLEDLHQERIVYRDLKPENIL----------LDDHGHIRISDLGLA------ 149

Query: 214 GIDLHLFPDNMEFEGDCRTSGFRCIEMQEKKPWKFQVDTYGL-CAIVHMMLHNSYMEIEK 272
              +H+ P+    +G   T G+   E+ + + + F  D + L C +  M+   S  +  K
Sbjct: 150 ---VHV-PEGQTIKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRK 205

Query: 273 K 273
           K
Sbjct: 206 K 206

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as multiple splice variants with different domain architectures. It is post-translationally palmitoylated and localized in the membrane. GRK6 plays important roles in the regulation of dopamine, M3 muscarinic, opioid, and chemokine receptor signaling. It also plays maladaptive roles in addiction and Parkinson's disease. GRK6-deficient mice exhibit altered dopamine receptor regulation, decreased lymphocyte chemotaxis, and increased acute inflammation and neutrophil chemotaxis. Length = 285

>gnl|CDD|173668 cd05577, STKc_GRK, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase

 Score = 42.9 bits (101), Expect = 1e-04
 Identities = 37/142 (26%), Positives = 61/142 (42%), Gaps = 25/142 (17%)

Query: 123 LVCDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLL 182
           LV   ++ G L+  I  Y V      E   I+Y  +++C LE LH   I++ D KP+N+L
Sbjct: 70  LVMTLMNGGDLKYHI--YNVGEPGFPEARAIFYAAQIICGLEHLHQRRIVYRDLKPENVL 127

Query: 183 IRYARDELTVLDHDRSGPWQDQGLC-LVDWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQ 241
                     LD        D G   + D G  ++        + +G   T G+   E+ 
Sbjct: 128 ----------LD--------DHGNVRISDLGLAVE---LKGGKKIKGRAGTPGYMAPEVL 166

Query: 242 EKKPWKFQVDTYGL-CAIVHMM 262
           + + + F VD + L C +  M+
Sbjct: 167 QGEVYDFSVDWFALGCTLYEMI 188

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of G protein signaling) homology (RH) domain and several motifs. The C-terminus diverges among different groups of GRKs. There are seven types of GRKs, named GRK1 to GRK7. They are subdivided into three main groups: visual (GRK1/7); beta-adrenergic receptor kinases (GRK2/3); and GRK4-like (GRK4/5/6). Expression of GRK2/3/5/6 is widespread while GRK1/4/7 show a limited tissue distribution. The substrate spectrum of the widely expressed GRKs partially overlaps. GRKs play important roles in the cardiovascular, immune, respiratory, skeletal, and nervous systems. Length = 277

>gnl|CDD|173671 cd05580, STKc_PKA, Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase

 Score = 42.5 bits (101), Expect = 2e-04
 Identities = 36/139 (25%), Positives = 56/139 (40%), Gaps = 24/139 (17%)

Query: 57  GQGGFAKVFKAYVNGDPEDVVALKIQKPAFPWEFYMYRQLDQ-----RISGRERSSF--- 108
           G G F +V     +       ALKI       +    +Q++      RI    R  F   
Sbjct: 10  GTGSFGRVMLVR-HKGSGKYYALKILSK---AKIVKLKQVEHVLNEKRILQSIRHPFLVN 65

Query: 109 ---GFAHRIHLYSDYSILVCDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILES 165
               F    +LY     LV +Y+  G L   +      G+  E V   +Y  +++  LE 
Sbjct: 66  LYGSFQDDSNLY-----LVMEYVPGGELFSHLRK---SGRFPEPVAR-FYAAQVVLALEY 116

Query: 166 LHDVGIIHGDFKPDNLLIR 184
           LH + I++ D KP+NLL+ 
Sbjct: 117 LHSLDIVYRDLKPENLLLD 135

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubiquitously in cells and interacts with many different downstream targets. It plays a role in the regulation of diverse processes such as growth, development, memory, metabolism, gene expression, immunity, and lipolysis. Length = 290

>gnl|CDD|173676 cd05585, STKc_YPK1_like, Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases

 Score = 41.8 bits (98), Expect = 3e-04
 Identities = 16/33 (48%), Positives = 24/33 (72%)

Query: 154 YYTIEMLCILESLHDVGIIHGDFKPDNLLIRYA 186
           +YT E+LC LE+LH   +I+ D KP+N+L+ Y 
Sbjct: 97  FYTAELLCALENLHKFNVIYRDLKPENILLDYQ 129

Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It plays a role in cell growth and sexual development. Length = 312

>gnl|CDD|173666 cd05575, STKc_SGK, Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase

 Score = 41.7 bits (98), Expect = 3e-04
 Identities = 37/145 (25%), Positives = 59/145 (40%), Gaps = 31/145 (21%)

Query: 124 VCDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLI 183
           V DY++ G L      ++   +S  E    +Y  E+   L  LH + II+ D KP+N+L 
Sbjct: 74  VLDYVNGGEL----FFHLQRERSFPEPRARFYAAEIASALGYLHSLNIIYRDLKPENIL- 128

Query: 184 RYARDELTVLDHDRSGPWQDQGLCLVDWGRGIDLHLFPDNMEFEGD----CRTSGFRCIE 239
                    LD        D GLC              + +E        C T  +   E
Sbjct: 129 ---------LDSQGHVVLTDFGLC-------------KEGIEHSKTTSTFCGTPEYLAPE 166

Query: 240 MQEKKPWKFQVDTYGLCAIVHMMLH 264
           +  K+P+   VD + L A+++ ML+
Sbjct: 167 VLRKQPYDRTVDWWCLGAVLYEMLY 191

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell proliferation, and apoptosis. Length = 323

>gnl|CDD|216618 pfam01636, APH, Phosphotransferase enzyme family

 Score = 41.0 bits (96), Expect = 4e-04
 Identities = 16/76 (21%), Positives = 26/76 (34%), Gaps = 7/76 (9%)

Query: 168 DVGIIHGDFKPDNLLIRYARDELT-VLDHDRSG---PWQDQGLCLVDWGRGIDLHLFPDN 223
            + ++HGD  P NLL+      +T V+D + +G   P  D    L   G  +   L    
Sbjct: 164 PLVLVHGDLHPGNLLVD-PGGRVTGVIDFEDAGLGDPAYDLASLLRSLGEELGAEL--LA 220

Query: 224 MEFEGDCRTSGFRCIE 239
                         + 
Sbjct: 221 AYLAAYGAAPDPARLR 236

This family consists of bacterial antibiotic resistance proteins, which confer resistance to various aminoglycosides they include: aminoglycoside 3'-phosphotransferase or kanamycin kinase / neomycin-kanamycin phosphotransferase and streptomycin 3''-kinase or streptomycin 3''-phosphotransferase. The aminoglycoside phosphotransferases inactivate aminoglycoside antibiotics via phosphorylation. This family also includes homoserine kinase. This family is related to fructosamine kinase pfam03881. Length = 238

>gnl|CDD|173733 cd07829, STKc_CDK_like, Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases

 Score = 40.9 bits (97), Expect = 5e-04
 Identities = 34/150 (22%), Positives = 56/150 (37%), Gaps = 35/150 (23%)

Query: 50  YQIKGCAGQGGFAKVFKAYVNGDPED--VVALKIQKPAFPWEFYMYRQLDQRISG----- 102
           Y+     G+G +  V+KA    D +   +VALK  +            LD    G     
Sbjct: 1   YEKLEKLGEGTYGVVYKAR---DKKTGEIVALKKIR------------LDNEEEGIPSTA 45

Query: 103 -RERS---SFGFAHRIHL----YSDYSI-LVCDYLSQGTLQDAINSYVVIGKSMEEVLCI 153
            RE S        + + L    +++  + LV +Y     L+  ++        +   L  
Sbjct: 46  LREISLLKELKHPNIVKLLDVIHTERKLYLVFEYCDM-DLKKYLDKR---PGPLSPNLIK 101

Query: 154 YYTIEMLCILESLHDVGIIHGDFKPDNLLI 183
               ++L  L   H   I+H D KP N+LI
Sbjct: 102 SIMYQLLRGLAYCHSHRILHRDLKPQNILI 131

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the early G1 phase by CDK4 or CDK6, the G1/S phase transition by CDK2, or the entry of mitosis by CDK1. They also exhibit overlapping cyclin specificity and functions in certain conditions. Knockout mice with a single CDK deleted remain viable with specific phenotypes, showing that some CDKs can compensate for each other. For example, CDK4 can compensate for the loss of CDK6, however, double knockout mice with both CDK4 and CDK6 deleted die in utero. CDK8 and CDK9 are mainly involved in transcription while CDK5 is implicated in neuronal function. CDK7 plays essential roles in both the cell cycle as a CDK-Activating Kinase (CAK) and in transcription as a component of the general transcription factor TFIIH. Length = 282

>gnl|CDD|173700 cd05609, STKc_MAST, Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase

 Score = 40.9 bits (96), Expect = 5e-04
 Identities = 17/29 (58%), Positives = 20/29 (68%)

Query: 155 YTIEMLCILESLHDVGIIHGDFKPDNLLI 183
           Y  E +  LE LH+ GI+H D KPDNLLI
Sbjct: 106 YFAETVLALEYLHNYGIVHRDLKPDNLLI 134

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that are also expressed at neuromuscular junctions and postsynaptic densities. MAST1, MAST2, and MAST3 bind and phosphorylate the tumor suppressor PTEN, and may contribute to the regulation and stabilization of PTEN. MAST2 is involved in the regulation of the Fc-gamma receptor of the innate immune response in macrophages, and may also be involved in the regulation of the Na+/H+ exchanger NHE3. Length = 305

>gnl|CDD|173736 cd07832, STKc_CCRK, Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase

 Score = 40.7 bits (96), Expect = 6e-04
 Identities = 38/157 (24%), Positives = 60/157 (38%), Gaps = 26/157 (16%)

Query: 49  KYQIKGCAGQGGFAKVFKAYVNGDPEDVVALK----------IQKPAFPWEFYMYRQLDQ 98
           +Y+I G  G+G    VFKA      E  VALK          I   A        R++  
Sbjct: 1   RYKILGRIGEGAHGIVFKAKDRETGE-TVALKKVALRRLEGGIPNQAL-------REI-- 50

Query: 99  RISGRERSSFGFAHR-IHLYSDYSILVCDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTI 157
           +     +  +      +  +    +LV +Y+    L + +       + + E     Y  
Sbjct: 51  KALQACQHPYVVKLLDVFPHGSGFVLVMEYM-PSDLSEVLRDEE---RPLPEAQVKSYMR 106

Query: 158 EMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLD 194
            +L  +  +H  GI+H D KP NLLI  A   L + D
Sbjct: 107 MLLKGVAYMHANGIMHRDLKPANLLIS-ADGVLKIAD 142

Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of heart failure. Length = 286

>gnl|CDD|173720 cd05631, STKc_GRK4, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4

 Score = 40.7 bits (95), Expect = 6e-04
 Identities = 46/214 (21%), Positives = 87/214 (40%), Gaps = 32/214 (14%)

Query: 57  GQGGFAKVFKAYVNGDPEDVVALKIQKPAFPWE-----FYMYRQLDQRISGRERSSFGFA 111
           G+GGF +V    V    +     K++K               +++ ++++ R   S  +A
Sbjct: 9   GKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKRILEKVNSRFVVSLAYA 68

Query: 112 HRIHLYSDYSILVCDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGI 171
           +      D   LV   ++ G L+  I  Y +     +E   I+Y  E+ C LE L    I
Sbjct: 69  YET---KDALCLVLTIMNGGDLKFHI--YNMGNPGFDEQRAIFYAAELCCGLEDLQRERI 123

Query: 172 IHGDFKPDNLLIRYARDELTVLDHDRSGPWQDQG-LCLVDWGRGIDLHLFPDNMEFEGDC 230
           ++ D KP+N+L+                   D+G + + D G  + +   P+     G  
Sbjct: 124 VYRDLKPENILL------------------DDRGHIRISDLGLAVQI---PEGETVRGRV 162

Query: 231 RTSGFRCIEMQEKKPWKFQVDTYGLCAIVHMMLH 264
            T G+   E+   + + F  D +GL  +++ M+ 
Sbjct: 163 GTVGYMAPEVINNEKYTFSPDWWGLGCLIYEMIQ 196

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found in the testis, but is also present in the cerebellum and kidney. It is expressed as multiple splice variants with different domain architectures. It is post-translationally palmitoylated and localized in the membrane. GRK4 polymorphisms are associated with hypertension and salt sensitivity, as they cause hyperphosphorylation, desensitization, and internalization of the dopamine 1 (D1) receptor while increasing the expression of the angiotensin II type 1 receptor. GRK4 plays a crucial role in the D1 receptor regulation of sodium excretion and blood pressure. Length = 285

>gnl|CDD|173746 cd07850, STKc_JNK, Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase

 Score = 40.9 bits (96), Expect = 6e-04
 Identities = 24/77 (31%), Positives = 41/77 (53%), Gaps = 14/77 (18%)

Query: 130 QGTLQDAINSYVVIGKSMEEVLC------------IYYTIEMLCILESLHDVGIIHGDFK 177
           Q +L++  + Y+V+ + M+  LC             Y   +MLC ++ LH  GIIH D K
Sbjct: 87  QKSLEEFQDVYLVM-ELMDANLCQVIQMDLDHERMSYLLYQMLCGIKHLHSAGIIHRDLK 145

Query: 178 PDNLLIRYARDELTVLD 194
           P N++++ +   L +LD
Sbjct: 146 PSNIVVK-SDCTLKILD 161

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3) that are alternatively spliced to produce at least 10 isoforms. JNKs are specifically activated by the MAPK kinases MKK4 and MKK7, which are in turn activated by upstream MAPK kinase kinases as a result of different stimuli including stresses such as ultraviolet (UV) irradiation, hyperosmolarity, heat shock, or cytokines. JNKs activate a large number of different substrates based on specific stimulus, cell type, and cellular condition, and may be implicated in seemingly contradictory functions. Length = 353

>gnl|CDD|132943 cd06612, STKc_MST1_2, Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2

 Score = 40.3 bits (95), Expect = 7e-04
 Identities = 37/147 (25%), Positives = 61/147 (41%), Gaps = 32/147 (21%)

Query: 50  YQIKGCAGQGGFAKVFKAYVNGDPEDVVALK----------IQKPAFPWEFYMYRQLDQR 99
           + I    G+G +  V+KA ++ +   VVA+K          I K     E  + +Q D  
Sbjct: 5   FDILEKLGEGSYGSVYKA-IHKETGQVVAIKVVPVEEDLQEIIK-----EISILKQCD-- 56

Query: 100 ISGRERSSFGFAHRIHLYSDYSI-LVCDYLSQGTLQDAINSYVVIGKSM--EEVLCIYYT 156
            S      +G       + +  + +V +Y   G++ D +       K++  EE+  I Y 
Sbjct: 57  -SPYIVKYYG-----SYFKNTDLWIVMEYCGAGSVSDIMKI---TNKTLTEEEIAAILYQ 107

Query: 157 IEMLCILESLHDVGIIHGDFKPDNLLI 183
              L  LE LH    IH D K  N+L+
Sbjct: 108 T--LKGLEYLHSNKKIHRDIKAGNILL 132

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a MAPK kinase) and MEKK1 (a MAPK kinase kinase) by acting as a MAPK kinase kinase kinase (MAPKKKK). Activation of JNK by MST1 leads to caspase activation and apoptosis. MST1 has also been implicated in cell proliferation and differentiation. Krs1 may regulate cell growth arrest and apoptosis in response to cellular stress. Length = 256

>gnl|CDD|173699 cd05608, STKc_GRK1, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1

 Score = 40.2 bits (94), Expect = 0.001
 Identities = 50/210 (23%), Positives = 86/210 (40%), Gaps = 23/210 (10%)

Query: 57  GQGGFAKVFKAYVNGDPEDVVALKIQKPAFP-WEFYMYRQLDQRISGRERSSF--GFAHR 113
           G+GGF +V    +    +     K+ K      + Y    +++RI  +  S F    A+ 
Sbjct: 2   GKGGFGEVSACQMRATGKLYACKKLNKKRLKKRKGYEGAMVEKRILAKVHSRFIVSLAYA 61

Query: 114 IHLYSDYSILVCDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIH 173
               +D   LV   ++ G L+  I +         E    +YT +++  LE LH   II+
Sbjct: 62  FQTKTDLC-LVMTIMNGGDLRYHIYNVDEENPGFPEPRACFYTAQIISGLEHLHQRRIIY 120

Query: 174 GDFKPDNLLIRYARDELTVLDHDRSGPWQDQGLCLVDWGRGIDLHLFPDNMEFEGDCRTS 233
            D KP+N+L          LD+D +    D GL          + L     + +G   T 
Sbjct: 121 RDLKPENVL----------LDNDGNVRISDLGLA---------VELKDGQSKTKGYAGTP 161

Query: 234 GFRCIEMQEKKPWKFQVDTYGLCAIVHMML 263
           GF   E+ + + + F VD + L   ++ M+
Sbjct: 162 GFMAPELLQGEEYDFSVDYFALGVTLYEMI 191

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual group of GRKs and is expressed in retinal cells. It phosphorylates rhodopsin in rod cells, which leads to termination of the phototransduction cascade. Mutations in GRK1 are associated to a recessively inherited form of stationary nightblindness called Oguchi disease. Length = 280

>gnl|CDD|173726 cd06610, STKc_OSR1_SPAK, Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase

 Score = 40.0 bits (94), Expect = 0.001
 Identities = 23/61 (37%), Positives = 30/61 (49%), Gaps = 1/61 (1%)

Query: 123 LVCDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLL 182
           LV  YLS G+L D I         ++E +      E+L  LE LH  G IH D K  N+L
Sbjct: 76  LVMPYLSGGSLLD-IMKSSYPRGGLDEAIIATVLKEVLKGLEYLHSNGQIHRDIKAGNIL 134

Query: 183 I 183
           +
Sbjct: 135 L 135

Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1 and SPAK contain a conserved C-terminal (CCT) domain, which recognizes a unique motif ([RK]FX[VI]) present in their activating kinases (WNK1/WNK4) and their substrates. Length = 267

>gnl|CDD|173673 cd05582, STKc_RSK_N, N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase

 Score = 39.8 bits (93), Expect = 0.001
 Identities = 40/142 (28%), Positives = 65/142 (45%), Gaps = 30/142 (21%)

Query: 57  GQGGFAKVF--KAYVNGDPEDVVALKIQKPAFPWEFYMYRQLDQRISGRERS-----SFG 109
           GQG F KVF  +     D   + A+K+ K A        +  D+  +  ER      +  
Sbjct: 5   GQGSFGKVFLVRKITGPDAGQLYAMKVLKKA------TLKVRDRVRTKMERDILAEVNHP 58

Query: 110 FAHRIH--------LYSDYSILVCDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLC 161
           F  ++H        LY     L+ D+L  G L   ++  V+   + E+V   +Y  E+  
Sbjct: 59  FIVKLHYAFQTEGKLY-----LILDFLRGGDLFTRLSKEVMF--TEEDVK--FYLAELAL 109

Query: 162 ILESLHDVGIIHGDFKPDNLLI 183
            L+ LH +GII+ D KP+N+L+
Sbjct: 110 ALDHLHSLGIIYRDLKPENILL 131

Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylates all known RSK substrates. RSKs act as downstream effectors of mitogen-activated protein kinase (MAPK) and play key roles in mitogen-activated cell growth, differentiation, and survival. Mammals possess four RSK isoforms (RSK1-4) from distinct genes. RSK proteins are also referred to as MAP kinase-activated protein kinases (MAPKAPKs), p90-RSKs, or p90S6Ks. Length = 318

>gnl|CDD|173694 cd05603, STKc_SGK2, Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2

 Score = 40.0 bits (93), Expect = 0.001
 Identities = 30/115 (26%), Positives = 48/115 (41%), Gaps = 27/115 (23%)

Query: 154 YYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSGPWQDQGLCLVDWGR 213
           +Y  E+   +  LH + II+ D KP+N+L          LD        D GLC      
Sbjct: 100 FYAAEVASAIGYLHSLNIIYRDLKPENIL----------LDSQGHVVLTDFGLC------ 143

Query: 214 GIDLHLFPDNMEFEGD----CRTSGFRCIEMQEKKPWKFQVDTYGLCAIVHMMLH 264
                   + +E E      C T  +   E+  K+P+   VD + L A+++ ML+
Sbjct: 144 -------KEGVEPEETTSTFCGTPEYLAPEVLRKEPYDRTVDWWCLGAVLYEMLY 191

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1. Length = 321

>gnl|CDD|173696 cd05605, STKc_GRK4_like, Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases

 Score = 39.8 bits (93), Expect = 0.001
 Identities = 42/170 (24%), Positives = 74/170 (43%), Gaps = 26/170 (15%)

Query: 94  RQLDQRISGRERSSFGFAHRIHLYSDYSILVCDYLSQGTLQDAINSYVVIGKSMEEVLCI 153
           +Q+ ++++ R   S  +A+      D   LV   ++ G L+  I  Y +     +E   +
Sbjct: 51  KQILEKVNSRFVVSLAYAYET---KDALCLVLTLMNGGDLKFHI--YNMGNPGFDEERAV 105

Query: 154 YYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSGPWQDQGLCLVDWGR 213
           +Y  E+ C LE LH   I++ D KP+N+L       L    H R          + D G 
Sbjct: 106 FYAAEITCGLEDLHRERIVYRDLKPENIL-------LDDYGHIR----------ISDLGL 148

Query: 214 GIDLHLFPDNMEFEGDCRTSGFRCIEMQEKKPWKFQVDTYGL-CAIVHMM 262
            +++   P+     G   T G+   E+ + + + F  D +GL C I  M+
Sbjct: 149 AVEI---PEGETIRGRVGTVGYMAPEVVKNERYTFSPDWWGLGCLIYEMI 195

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5, GRK6, and similar GRKs. GRKs in this group contain an N-terminal RGS homology (RH) domain and a catalytic domain, but lack a G protein betagamma-subunit binding domain. They are localized to the plasma membrane through post-translational lipid modification or direct binding to PIP2. Length = 285

>gnl|CDD|173725 cd06608, STKc_myosinIII_like, Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases

 Score = 39.2 bits (92), Expect = 0.002
 Identities = 34/146 (23%), Positives = 61/146 (41%), Gaps = 13/146 (8%)

Query: 47  GKKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKP------AFPWEFYMYRQLDQRI 100
              +++    G+G + KV+KA  +     +VA+KI             E+ + R+     
Sbjct: 5   TGIFELVEVIGEGTYGKVYKA-RHKKTGQLVAIKIMDIIEDEEEEIKEEYNILRKYSNH- 62

Query: 101 SGRERSSF--GFAHRIHLYSDYSI-LVCDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTI 157
                ++F   F  +    +D  + LV +    G++ D +      GK ++E    Y   
Sbjct: 63  --PNIATFYGAFIKKNPPGNDDQLWLVMELCGGGSVTDLVKGLRKKGKRLKEEWIAYILR 120

Query: 158 EMLCILESLHDVGIIHGDFKPDNLLI 183
           E L  L  LH+  +IH D K  N+L+
Sbjct: 121 ETLRGLAYLHENKVIHRDIKGQNILL 146

Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin III may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. It may also function as a cargo carrier during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. The Drosophila class III myosin, called NinaC (Neither inactivation nor afterpotential protein C), is critical in normal adaptation and termination of photoresponse. Vertebrates contain two isoforms of class III myosin, IIIA and IIIB. This subfamily also includes mammalian NIK-like embryo-specific kinase (NESK), Traf2- and Nck-interacting kinase (TNIK), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6). MAP4Ks are involved in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Length = 275

>gnl|CDD|240175 cd05154, ACAD10_11_like, Acyl-CoA dehydrogenase (ACAD) 10 and 11, N-terminal domain, and similar proteins

 Score = 38.7 bits (91), Expect = 0.002
 Identities = 9/29 (31%), Positives = 15/29 (51%), Gaps = 1/29 (3%)

Query: 167 HDVGIIHGDFKPDNLLIRYARDELT-VLD 194
              G++HGD++  N+L       +  VLD
Sbjct: 172 SRPGLVHGDYRLGNVLFHPDEPRVVAVLD 200

This subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of bacterial and eukaryotic proteins with similarity to the N-terminal domains of vertebrate ACAD10 and ACAD11. ACADs are a family of flavoproteins that are involved in the beta-oxidation of fatty acyl-CoA derivatives. ACAD deficiency can cause metabolic disorders including muscle fatigue, hypoglycemia, and hepatic lipidosis, among them. There are at least 11 distinct ACADs, some of which show distinct substrate specificities to either straight-chain or branched-chain fatty acids. ACAD10 is widely expressed in human tissues and is highly expressed in liver, kidney, pancreas, and spleen. ACAD10 and ACAD11 contain a long N-terminal domain with similarity to phosphotransferases with a PK fold, which is absent in other ACADs. They may exhibit multiple functions in acyl-CoA oxidation pathways. Length = 223

>gnl|CDD|132978 cd06647, STKc_PAK_I, Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase

 Score = 39.1 bits (91), Expect = 0.002
 Identities = 25/69 (36%), Positives = 34/69 (49%), Gaps = 5/69 (7%)

Query: 115 HLYSDYSILVCDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHG 174
           +L  D   +V +YL+ G+L D     VV    M+E        E L  LE LH   +IH 
Sbjct: 85  YLVGDELWVVMEYLAGGSLTD-----VVTETCMDEGQIAAVCRECLQALEFLHSNQVIHR 139

Query: 175 DFKPDNLLI 183
           D K DN+L+
Sbjct: 140 DIKSDNILL 148

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group I PAKs, also called conventional PAKs, include PAK1, PAK2, and PAK3. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). They interact with the SH3 domain containing proteins Nck, Grb2 and PIX. Binding of group I PAKs to activated GTPases leads to conformational changes that destabilize the AID, allowing autophosphorylation and full activation of the kinase domain. Known group I PAK substrates include MLCK, Bad, Raf, MEK1, LIMK, Merlin, Vimentin, Myc, Stat5a, and Aurora A, among others. Length = 293

>gnl|CDD|143384 cd07879, STKc_p38delta_MAPK13, Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase

 Score = 39.1 bits (91), Expect = 0.002
 Identities = 49/166 (29%), Positives = 70/166 (42%), Gaps = 23/166 (13%)

Query: 40  NKTIEIGGKKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFPWEFYM---YRQL 96
           NKT+    ++Y      G G +  V  A      E V   K+ +P F  E +    YR+L
Sbjct: 7   NKTVWELPERYTSLKQVGSGAYGSVCSAIDKRTGEKVAIKKLSRP-FQSEIFAKRAYREL 65

Query: 97  -------DQRISGRERSSFGFAHRIHLYSDYSILVCDYLSQGTLQDAINSYVVIGKSMEE 149
                   + + G     F  A     + D+  LV  Y+ Q  LQ       ++G  + E
Sbjct: 66  TLLKHMQHENVIGL-LDVFTSAVSGDEFQDF-YLVMPYM-QTDLQK------IMGHPLSE 116

Query: 150 VLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARD-ELTVLD 194
               Y   +MLC L+ +H  GIIH D KP NL +    D EL +LD
Sbjct: 117 DKVQYLVYQMLCGLKYIHSAGIIHRDLKPGNLAVN--EDCELKILD 160

Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13, is found in skeletal muscle, heart, lung, testis, pancreas, and small intestine. It regulates microtubule function by phosphorylating Tau. It activates the c-jun promoter and plays a role in G2 cell cycle arrest. It also controls the degration of c-Myb, which is associated with myeloid leukemia and poor prognosis in colorectal cancer. p38delta is the main isoform involved in regulating the differentiation and apoptosis of keratinocytes. Length = 342

>gnl|CDD|132960 cd06629, STKc_MAPKKK_Bck1_like, Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases

 Score = 39.0 bits (91), Expect = 0.002
 Identities = 38/141 (26%), Positives = 65/141 (46%), Gaps = 19/141 (13%)

Query: 57  GQGGFAKVFKAYVNGDPEDVVALK-IQKPAFPWEFYMYRQLDQRISGRERSSFGFAHRIH 115
           G+G + +V+ A +N    +++A+K ++ PA     +  RQ D   + R           H
Sbjct: 10  GKGTYGRVYLA-LNVTTGEMMAVKQVELPATIAGRHDSRQKDMVKALRSEIET-LKDLDH 67

Query: 116 L-----------YSDYSILVCDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILE 164
           L               SI + +Y+  G++   + +Y   G+  EE L  ++T ++L  L 
Sbjct: 68  LNIVQYLGFETTEEYLSIFL-EYVPGGSIGSCLRTY---GR-FEEQLVRFFTEQVLEGLA 122

Query: 165 SLHDVGIIHGDFKPDNLLIRY 185
            LH  GI+H D K DNLL+  
Sbjct: 123 YLHSKGILHRDLKADNLLVDA 143

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell integrity MAPK pathway, which is activated by stresses and aggressions to the cell wall. The MAPKKK Bck1, MAPKKs Mkk1 and Mkk2, and the MAPK Slt2 make up the cascade that is important in the maintenance of cell wall homeostasis. Fission yeast Mkh1 is involved in MAPK cascades regulating cell morphology, cell wall integrity, salt resistance, and filamentous growth in response to stress. Length = 272

>gnl|CDD|173663 cd05572, STKc_cGK_PKG, Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase

 Score = 38.8 bits (91), Expect = 0.002
 Identities = 14/38 (36%), Positives = 22/38 (57%)

Query: 146 SMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLI 183
             +E    +Y   ++   E LH+ GII+ D KP+NLL+
Sbjct: 89  LFDEYTARFYIACVVLAFEYLHNRGIIYRDLKPENLLL 126

Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowing autophosphorylation and activation of the kinase. cGKI is a soluble protein expressed in all smooth muscles, platelets, cerebellum, and kidney. It is also expressed at lower concentrations in other tissues. cGKII is a membrane-bound protein that is most abundantly expressed in the intestine. It is also present in the brain nuclei, adrenal cortex, kidney, lung, and prostate. cGKI is involved in the regulation of smooth muscle tone, smooth cell proliferation, and platelet activation. cGKII plays a role in the regulation of secretion, such as renin secretion by the kidney and aldosterone secretion by the adrenal. It also regulates bone growth and the circadian rhythm. Length = 262

>gnl|CDD|132940 cd06609, STKc_MST3_like, Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases

 Score = 38.8 bits (91), Expect = 0.002
 Identities = 38/155 (24%), Positives = 58/155 (37%), Gaps = 43/155 (27%)

Query: 48  KKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALK-------------IQKPAFPWEFYMYR 94
           + + +  C G+G F +V+KA        VVA+K             IQ+     E     
Sbjct: 1   ELFTLLECIGKGSFGEVYKAIDKR-TNQVVAIKVIDLEEAEDEIEDIQQ-----EIQFLS 54

Query: 95  QLDQRISGRERSSF------GFAHRIHLYSDYSILVCDYLSQGTLQDAINSYVVIGKSME 148
           Q         RS +       F     L+     ++ +Y   G+  D +      GK  E
Sbjct: 55  QC--------RSPYITKYYGSFLKGSKLW-----IIMEYCGGGSCLDLLKP----GKLDE 97

Query: 149 EVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLI 183
             +      E+L  LE LH+ G IH D K  N+L+
Sbjct: 98  TYIAF-ILREVLLGLEYLHEEGKIHRDIKAANILL 131

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN) signaling pathway, and plays a role in cytokinesis. SPS1 plays a role in regulating proteins required for spore wall formation. MST4 plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. STK25 may play a role in the regulation of cell migration and polarization. Length = 274

>gnl|CDD|225714 COG3173, COG3173, Predicted aminoglycoside phosphotransferase [General function prediction only]

 Score = 39.0 bits (91), Expect = 0.002
 Identities = 13/40 (32%), Positives = 21/40 (52%), Gaps = 4/40 (10%)

Query: 167 HDVGIIHGDFKPDNLLIRYARDELTVLDHDRSG---PWQD 203
               ++HGD++P NL+I   R    VLD + +    P +D
Sbjct: 196 GPPVLVHGDYRPGNLIIDPGR-PTGVLDWELATLGDPLED 234

Length = 321

>gnl|CDD|173734 cd07830, STKc_MAK_like, Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases

 Score = 38.7 bits (91), Expect = 0.003
 Identities = 40/144 (27%), Positives = 58/144 (40%), Gaps = 22/144 (15%)

Query: 50  YQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFP-WEFYMYRQLDQRISGRE---- 104
           Y++    G G F  V+ A  N +  ++VA+K  K  F  WE  M   L      RE    
Sbjct: 1   YKVIKQLGDGTFGSVYLA-RNKETGELVAIKKMKKKFYSWEECM--NL------REVKSL 51

Query: 105 RSSFGFAHRIHLY-----SDYSILVCDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEM 159
           R      + + L      +D    V +Y+ +G L   +        S   +  I Y I  
Sbjct: 52  RKLNEHPNIVKLKEVFRENDELYFVFEYM-EGNLYQLMKDRKGKPFSESVIRSIIYQI-- 108

Query: 160 LCILESLHDVGIIHGDFKPDNLLI 183
           L  L  +H  G  H D KP+NLL+
Sbjct: 109 LQGLAHIHKHGFFHRDLKPENLLV 132

Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertility. It functions as a coactivator of the androgen receptor in prostate cells. MRK, also called Intestinal Cell Kinase (ICK), is expressed ubiquitously, with highest expression in the ovary and uterus. A missense mutation in MRK causes endocrine-cerebro-osteodysplasia (ECO), suggesting that this protein plays an important role in the development of many organs. MAK and MRK may be involved in regulating cell cycle and cell fate. Ime2p is a meiosis-specific kinase that is important during meiotic initiation and during the later stages of meiosis. Mde3 functions downstream of the transcription factor Mei-4 which is essential for meiotic prophase I. Length = 283

>gnl|CDD|173717 cd05628, STKc_NDR1, Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1

 Score = 38.9 bits (90), Expect = 0.003
 Identities = 21/76 (27%), Positives = 41/76 (53%), Gaps = 9/76 (11%)

Query: 108 FGFAHRIHLYSDYSILVCDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLH 167
           + F  +++LY     L+ ++L  G +     + ++   ++ E    +Y  E +  ++S+H
Sbjct: 68  YSFQDKLNLY-----LIMEFLPGGDMM----TLLMKKDTLTEEETQFYIAETVLAIDSIH 118

Query: 168 DVGIIHGDFKPDNLLI 183
            +G IH D KPDNLL+
Sbjct: 119 QLGFIHRDIKPDNLLL 134

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, muscle, lung and spleen. It is not an essential protein because mice deficient of NDR1 remain viable and fertile. However, these mice develop T-cell lymphomas and appear to be hypersenstive to carcinogenic treatment. NDR1 appears to act as a tumor suppressor. NDR1 is also called STK38. Length = 363

>gnl|CDD|236586 PRK09605, PRK09605, bifunctional UGMP family protein/serine/threonine protein kinase; Validated

 Score = 39.1 bits (92), Expect = 0.003
 Identities = 18/70 (25%), Positives = 28/70 (40%), Gaps = 28/70 (40%)

Query: 166 LHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSGPWQDQGLCLVDWG----------RGI 215
           LH  GI+HGD    N ++R                  D  L L+D+G          + +
Sbjct: 444 LHKAGIVHGDLTTSNFIVR------------------DDRLYLIDFGLGKYSDLIEDKAV 485

Query: 216 DLHLFPDNME 225
           DLH+   ++E
Sbjct: 486 DLHVLKQSLE 495

Length = 535

>gnl|CDD|173718 cd05629, STKc_NDR_like_fungal, Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

 Score = 38.7 bits (90), Expect = 0.003
 Identities = 21/66 (31%), Positives = 35/66 (53%), Gaps = 4/66 (6%)

Query: 118 SDYSILVCDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFK 177
           + Y  L+ ++L  G L   +  Y     +  E +  +Y  E +  +E++H +G IH D K
Sbjct: 73  AQYLYLIMEFLPGGDLMTMLIKY----DTFSEDVTRFYMAECVLAIEAVHKLGFIHRDIK 128

Query: 178 PDNLLI 183
           PDN+LI
Sbjct: 129 PDNILI 134

Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of Ace2p activity and cellular morphogenesis) network. CBK1 and Orb6 play similar roles in coordinating cell morphology with cell cycle progression. Ukc1 is involved in morphogenesis, pathogenicity, and pigment formation. Cot1 plays a role in polar tip extension. Length = 377

>gnl|CDD|173669 cd05578, STKc_Yank1, Catalytic domain of the Protein Serine/Threonine Kinase, Yank1

 Score = 38.5 bits (90), Expect = 0.003
 Identities = 37/147 (25%), Positives = 58/147 (39%), Gaps = 26/147 (17%)

Query: 118 SDYSILVCDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFK 177
            +   LV D L  G L+  ++  V       E    ++  E++  LE LH  GIIH D K
Sbjct: 72  EENMYLVVDLLLGGDLRYHLSQKVK----FSEEQVKFWICEIVLALEYLHSKGIIHRDIK 127

Query: 178 PDNLLIRYARDELTVLDHDRSGPWQDQGLC-LVDWGRGIDLHLFPDNMEFEGDCRTSGFR 236
           PDN+L+    DE              QG   + D+     +   PD +       T G+ 
Sbjct: 128 PDNILL----DE--------------QGHVHITDFNIATKVT--PDTLTTST-SGTPGYM 166

Query: 237 CIEMQEKKPWKFQVDTYGLCAIVHMML 263
             E+  ++ +   VD + L    +  L
Sbjct: 167 APEVLCRQGYSVAVDWWSLGVTAYECL 193

Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A. Length = 258

>gnl|CDD|143379 cd07874, STKc_JNK3, Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3

 Score = 38.5 bits (89), Expect = 0.004
 Identities = 21/70 (30%), Positives = 37/70 (52%), Gaps = 13/70 (18%)

Query: 127 YLSQGTLQDAINSYVVIGKSMEEVLC------------IYYTIEMLCILESLHDVGIIHG 174
           +  Q +L++  + Y+V+ + M+  LC             Y   +MLC ++ LH  GIIH 
Sbjct: 85  FTPQKSLEEFQDVYLVM-ELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHR 143

Query: 175 DFKPDNLLIR 184
           D KP N++++
Sbjct: 144 DLKPSNIVVK 153

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, stroke, sciatic axotomy neural death, and neuronal death due to NGF deprivation, oxidative stress, or exposure to beta-amyloid peptide. This suggests that JNK3 may play roles in the pathogenesis of these diseases. Length = 355

>gnl|CDD|173690 cd05599, STKc_NDR_like, Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

 Score = 38.5 bits (90), Expect = 0.004
 Identities = 14/30 (46%), Positives = 21/30 (70%)

Query: 154 YYTIEMLCILESLHDVGIIHGDFKPDNLLI 183
           +Y  E +  ++S+H +G IH D KPDNLL+
Sbjct: 105 FYIAETILAIDSIHKLGYIHRDIKPDNLLL 134

Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplication. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. This subfamily also contains fungal NDR-like kinases. Length = 364

>gnl|CDD|226168 COG3642, COG3642, Mn2+-dependent serine/threonine protein kinase [Signal transduction mechanisms]

 Score = 37.6 bits (88), Expect = 0.004
 Identities = 38/192 (19%), Positives = 68/192 (35%), Gaps = 60/192 (31%)

Query: 57  GQGGFAKVFKAYVNGDPEDVVALKIQKPAFPWEFYMYRQLDQRISGRERSSFGF-----A 111
            QG  A ++     G P  VV  +I K       Y + +LD+++  RER+         A
Sbjct: 5   KQGAEAIIYLTDFLGLPA-VVKERIPKR------YRHPELDEKLR-RERTRREARILAKA 56

Query: 112 HRIHL--------YSDYSILVCDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCIL 163
               +          D  ++V +Y+    L+DA+         + EV        ++   
Sbjct: 57  REAGVPVPIVYDVDPDNGLIVMEYIEGELLKDALEE--ARPDLLREVG------RLV--- 105

Query: 164 ESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSGPWQDQGLCLVDWG----------R 213
             LH  GI+HGD    N+++                      +  +D+G          +
Sbjct: 106 GKLHKAGIVHGDLTTSNIILS------------------GGRIYFIDFGLGEFSDEVEDK 147

Query: 214 GIDLHLFPDNME 225
            +DLH+    +E
Sbjct: 148 AVDLHVLERALE 159

Length = 204

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	351
KOG0615	475	consensus Serine/threonine protein kinase Chk2 and	100.0
KOG0575	592	consensus Polo-like serine/threonine protein kinas	100.0
KOG0598	357	consensus Ribosomal protein S6 kinase and related	100.0
KOG0581	364	consensus Mitogen-activated protein kinase kinase	100.0
KOG0592	604	consensus 3-phosphoinositide-dependent protein kin	100.0
KOG0595	429	consensus Serine/threonine-protein kinase involved	100.0
KOG0605	550	consensus NDR and related serine/threonine kinases	100.0
KOG0583	370	consensus Serine/threonine protein kinase [Signal	100.0
KOG0616	355	consensus cAMP-dependent protein kinase catalytic	100.0
KOG0593	396	consensus Predicted protein kinase KKIAMRE [Genera	100.0
KOG0661	538	consensus MAPK related serine/threonine protein ki	100.0
KOG0578	550	consensus p21-activated serine/threonine protein k	100.0
KOG0591	375	consensus NIMA (never in mitosis)-related G2-speci	100.0
KOG0588	786	consensus Serine/threonine protein kinase [Cell cy	100.0
KOG0198	313	consensus MEKK and related serine/threonine protei	100.0
KOG0597	808	consensus Serine-threonine protein kinase FUSED [G	100.0
KOG0694	694	consensus Serine/threonine protein kinase [Signal	100.0
KOG0660	359	consensus Mitogen-activated protein kinase [Signal	100.0
KOG0201	467	consensus Serine/threonine protein kinase [Signal	100.0
KOG0033	355	consensus Ca2+/calmodulin-dependent protein kinase	100.0
KOG0585	576	consensus Ca2+/calmodulin-dependent protein kinase	100.0
KOG0580	281	consensus Serine/threonine protein kinase [Cell cy	100.0
KOG0611	668	consensus Predicted serine/threonine protein kinas	100.0
KOG0582	516	consensus Ste20-like serine/threonine protein kina	100.0
cd05612	291	STKc_PRKX_like Catalytic domain of PRKX-like Prote	100.0
cd05571	323	STKc_PKB Catalytic domain of the Protein Serine/Th	100.0
PTZ00263	329	protein kinase A catalytic subunit; Provisional	100.0
KOG0610	459	consensus Putative serine/threonine protein kinase	100.0
PTZ00426	340	cAMP-dependent protein kinase catalytic subunit; P	100.0
cd05587	324	STKc_cPKC Catalytic domain of the Protein Serine/T	100.0
cd05631	285	STKc_GRK4 Catalytic domain of the Protein Serine/T	100.0
KOG4717	864	consensus Serine/threonine protein kinase [Signal	100.0
KOG0659	318	consensus Cdk activating kinase (CAK)/RNA polymera	100.0
KOG2345	302	consensus Serine/threonine protein kinase/TGF-beta	100.0
KOG0667	586	consensus Dual-specificity tyrosine-phosphorylatio	100.0
cd05593	328	STKc_PKB_gamma Catalytic domain of the Protein Ser	100.0
cd05595	323	STKc_PKB_beta Catalytic domain of the Protein Seri	100.0
cd05590	320	STKc_nPKC_eta Catalytic domain of the Protein Seri	100.0
cd05616	323	STKc_cPKC_beta Catalytic domain of the Protein Ser	100.0
KOG0032	382	consensus Ca2+/calmodulin-dependent protein kinase	100.0
PTZ00283	496	serine/threonine protein kinase; Provisional	100.0
PTZ00267	478	NIMA-related protein kinase; Provisional	100.0
cd05600	333	STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p-	100.0
KOG0192	362	consensus Tyrosine kinase specific for activated (	100.0
cd05585	312	STKc_YPK1_like Catalytic domain of Yeast Protein K	100.0
KOG0600	560	consensus Cdc2-related protein kinase [Cell cycle	100.0
cd07848	287	STKc_CDKL5 Catalytic domain of the Serine/Threonin	100.0
KOG0663	419	consensus Protein kinase PITSLRE and related kinas	100.0
KOG0658	364	consensus Glycogen synthase kinase-3 [Carbohydrate	100.0
PTZ00284	467	protein kinase; Provisional	100.0
cd05589	324	STKc_PKN Catalytic domain of the Protein Serine/Th	100.0
cd05620	316	STKc_nPKC_delta Catalytic domain of the Protein Se	100.0
cd07869	303	STKc_PFTAIRE1 Catalytic domain of the Serine/Threo	100.0
cd05573	350	STKc_ROCK_NDR_like Catalytic domain of ROCK- and N	100.0
cd05594	325	STKc_PKB_alpha Catalytic domain of the Protein Ser	100.0
cd07871	288	STKc_PCTAIRE3 Catalytic domain of the Serine/Threo	100.0
cd05588	329	STKc_aPKC Catalytic domain of the Protein Serine/T	100.0
KOG0589	426	consensus Serine/threonine protein kinase [General	100.0
cd05592	316	STKc_nPKC_theta_delta Catalytic domain of the Prot	100.0
KOG1989	738	consensus ARK protein kinase family [Signal transd	100.0
cd06649	331	PKc_MEK2 Catalytic domain of the dual-specificity	100.0
cd05591	321	STKc_nPKC_epsilon Catalytic domain of the Protein	100.0
cd05615	323	STKc_cPKC_alpha Catalytic domain of the Protein Se	100.0
cd05575	323	STKc_SGK Catalytic domain of the Protein Serine/Th	100.0
cd05619	316	STKc_nPKC_theta Catalytic domain of the Protein Se	100.0
cd05614	332	STKc_MSK2_N N-terminal catalytic domain of the Pro	100.0
cd05628	363	STKc_NDR1 Catalytic domain of the Protein Serine/T	100.0
cd05599	364	STKc_NDR_like Catalytic domain of Nuclear Dbf2-Rel	100.0
cd07862	290	STKc_CDK6 Catalytic domain of the Serine/Threonine	100.0
cd05570	318	STKc_PKC Catalytic domain of the Protein Serine/Th	100.0
cd05102	338	PTKc_VEGFR3 Catalytic domain of the Protein Tyrosi	100.0
cd05618	329	STKc_aPKC_iota Catalytic domain of the Protein Ser	100.0
PTZ00036	440	glycogen synthase kinase; Provisional	100.0
cd05584	323	STKc_p70S6K Catalytic domain of the Protein Serine	100.0
KOG0599	411	consensus Phosphorylase kinase gamma subunit [Carb	100.0
cd05626	381	STKc_LATS2 Catalytic domain of the Protein Serine/	100.0
cd05629	377	STKc_NDR_like_fungal Catalytic domain of Fungal Nu	100.0
cd05602	325	STKc_SGK1 Catalytic domain of the Protein Serine/T	100.0
cd05596	370	STKc_ROCK Catalytic domain of the Protein Serine/T	100.0
cd07859	338	STKc_TDY_MAPK_plant Catalytic domain of the Serine	100.0
PHA03212	391	serine/threonine kinase US3; Provisional	100.0
cd06650	333	PKc_MEK1 Catalytic domain of the dual-specificity	100.0
cd05608	280	STKc_GRK1 Catalytic domain of the Protein Serine/T	100.0
KOG0690	516	consensus Serine/threonine protein kinase [Signal	100.0
cd05625	382	STKc_LATS1 Catalytic domain of the Protein Serine/	100.0
cd05603	321	STKc_SGK2 Catalytic domain of the Protein Serine/T	100.0
cd07876	359	STKc_JNK2 Catalytic domain of the Serine/Threonine	100.0
KOG0596	677	consensus Dual specificity; serine/threonine and t	100.0
cd05601	330	STKc_CRIK Catalytic domain of the Protein Serine/T	100.0
cd05598	376	STKc_LATS Catalytic domain of the Protein Serine/T	100.0
cd05617	327	STKc_aPKC_zeta Catalytic domain of the Protein Ser	100.0
cd05604	325	STKc_SGK3 Catalytic domain of the Protein Serine/T	100.0
cd05627	360	STKc_NDR2 Catalytic domain of the Protein Serine/T	100.0
cd05621	370	STKc_ROCK2 Catalytic domain of the Protein Serine/	100.0
cd05605	285	STKc_GRK4_like Catalytic domain of G protein-coupl	100.0
cd06646	267	STKc_MAP4K5 Catalytic domain of the Protein Serine	100.0
cd07863	288	STKc_CDK4 Catalytic domain of the Serine/Threonine	100.0
cd05586	330	STKc_Sck1_like Catalytic domain of Suppressor of l	100.0
KOG0594	323	consensus Protein kinase PCTAIRE and related kinas	100.0
cd07874	355	STKc_JNK3 Catalytic domain of the Serine/Threonine	100.0
cd07875	364	STKc_JNK1 Catalytic domain of the Serine/Threonine	100.0
cd05622	371	STKc_ROCK1 Catalytic domain of the Protein Serine/	100.0
cd06654	296	STKc_PAK1 Catalytic domain of the Protein Serine/T	100.0
PF00069	260	Pkinase: Protein kinase domain Protein kinase; unc	100.0
cd07872	309	STKc_PCTAIRE2 Catalytic domain of the Serine/Threo	100.0
cd05597	331	STKc_DMPK_like Catalytic domain of Myotonic Dystro	100.0
KOG0193	678	consensus Serine/threonine protein kinase RAF [Sig	100.0
cd05582	318	STKc_RSK_N N-terminal catalytic domain of the Prot	100.0
KOG0579	1187	consensus Ste20-like serine/threonine protein kina	100.0
PLN00034	353	mitogen-activated protein kinase kinase; Provision	100.0
cd05630	285	STKc_GRK6 Catalytic domain of the Protein Serine/T	100.0
PHA03207	392	serine/threonine kinase US3; Provisional	100.0
cd06656	297	STKc_PAK3 Catalytic domain of the Protein Serine/T	100.0
cd06644	292	STKc_STK10_LOK Catalytic domain of the Protein Ser	100.0
cd06625	263	STKc_MEKK3_like Catalytic domain of MAP/ERK kinase	100.0
cd06645	267	STKc_MAP4K3 Catalytic domain of the Protein Serine	100.0
cd07853	372	STKc_NLK Catalytic domain of the Serine/Threonine	100.0
cd06655	296	STKc_PAK2 Catalytic domain of the Protein Serine/T	100.0
cd06611	280	STKc_SLK_like Catalytic domain of Ste20-like kinas	100.0
PTZ00266	1021	NIMA-related protein kinase; Provisional	100.0
KOG4279	1226	consensus Serine/threonine protein kinase [Signal	100.0
cd05624	331	STKc_MRCK_beta Catalytic domain of the Protein Ser	100.0
cd05580	290	STKc_PKA Catalytic domain of the Protein Serine/Th	100.0
KOG4721	904	consensus Serine/threonine protein kinase, contain	100.0
cd05623	332	STKc_MRCK_alpha Catalytic domain of the Protein Se	100.0
PRK13184	932	pknD serine/threonine-protein kinase; Reviewed	100.0
cd07873	301	STKc_PCTAIRE1 Catalytic domain of the Serine/Threo	100.0
cd06609	274	STKc_MST3_like Catalytic domain of Mammalian Ste20	100.0
cd06642	277	STKc_STK25-YSK1 Catalytic domain of the Protein Se	100.0
cd06638	286	STKc_myosinIIIA Catalytic domain of the Protein Se	100.0
cd08223	257	STKc_Nek4 Catalytic domain of the Protein Serine/T	100.0
KOG0604	400	consensus MAP kinase-activated protein kinase 2 [S	100.0
cd06615	308	PKc_MEK Catalytic domain of the dual-specificity P	100.0
PHA03209	357	serine/threonine kinase US3; Provisional	100.0
cd05104	375	PTKc_Kit Catalytic domain of the Protein Tyrosine	100.0
cd06613	262	STKc_MAP4K3_like Catalytic domain of Mitogen-activ	100.0
cd05632	285	STKc_GRK5 Catalytic domain of the Protein Serine/T	100.0
cd06617	283	PKc_MKK3_6 Catalytic domain of the dual-specificit	100.0
cd06637	272	STKc_TNIK Catalytic domain of the Protein Serine/T	100.0
cd05064	266	PTKc_EphR_A10 Catalytic domain of the Protein Tyro	100.0
cd05574	316	STKc_phototropin_like Catalytic domain of Phototro	100.0
cd06608	275	STKc_myosinIII_like Catalytic domain of Class III	100.0
cd06640	277	STKc_MST4 Catalytic domain of the Protein Serine/T	100.0
cd08529	256	STKc_FA2-like Catalytic domain of the Protein Seri	100.0
cd05607	277	STKc_GRK7 Catalytic domain of the Protein Serine/T	100.0
cd06619	279	PKc_MKK5 Catalytic domain of the dual-specificity	100.0
cd05106	374	PTKc_CSF-1R Catalytic domain of the Protein Tyrosi	100.0
KOG0197	468	consensus Tyrosine kinases [Signal transduction me	100.0
cd08219	255	STKc_Nek3 Catalytic domain of the Protein Serine/T	100.0
cd06643	282	STKc_SLK Catalytic domain of the Protein Serine/Th	100.0
KOG0612	1317	consensus Rho-associated, coiled-coil containing p	100.0
KOG0671	415	consensus LAMMER dual specificity kinases [Signal	100.0
cd06628	267	STKc_MAPKKK_Byr2_like Catalytic domain of fungal B	100.0
cd06639	291	STKc_myosinIIIB Catalytic domain of the Protein Se	100.0
cd07878	343	STKc_p38beta_MAPK11 Catalytic domain of the Serine	100.0
cd05096	304	PTKc_DDR1 Catalytic domain of the Protein Tyrosine	100.0
cd06636	282	STKc_MAP4K4_6 Catalytic domain of the Protein Seri	100.0
PHA03211	461	serine/threonine kinase US3; Provisional	100.0
cd08220	256	STKc_Nek8 Catalytic domain of the Protein Serine/T	100.0
KOG0586	596	consensus Serine/threonine protein kinase [General	100.0
cd05054	337	PTKc_VEGFR Catalytic domain of the Protein Tyrosin	100.0
cd05052	263	PTKc_Abl Catalytic domain of the Protein Tyrosine	100.0
PHA03390	267	pk1 serine/threonine-protein kinase 1; Provisional	100.0
cd05093	288	PTKc_TrkB Catalytic domain of the Protein Tyrosine	100.0
cd07868	317	STKc_CDK8 Catalytic domain of the Serine/Threonine	100.0
cd06612	256	STKc_MST1_2 Catalytic domain of the Protein Serine	100.0
cd06622	286	PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS	100.0
cd05633	279	STKc_GRK3 Catalytic domain of the Protein Serine/T	100.0
cd05114	256	PTKc_Tec_Rlk Catalytic domain of the Protein Tyros	100.0
cd05049	280	PTKc_Trk Catalytic domain of the Protein Tyrosine	100.0
cd05048	283	PTKc_Ror Catalytic Domain of the Protein Tyrosine	100.0
cd07839	284	STKc_CDK5 Catalytic domain of the Serine/Threonine	100.0
cd08228	267	STKc_Nek6 Catalytic domain of the Protein Serine/T	100.0
cd07861	285	STKc_CDK1_euk Catalytic domain of the Serine/Threo	100.0
cd06647	293	STKc_PAK_I Catalytic domain of the Protein Serine/	100.0
cd05062	277	PTKc_IGF-1R Catalytic domain of the Protein Tyrosi	100.0
cd08227	327	PK_STRAD_alpha Pseudokinase domain of STE20-relate	100.0
cd05094	291	PTKc_TrkC Catalytic domain of the Protein Tyrosine	100.0
cd07832	286	STKc_CCRK Catalytic domain of the Serine/Threonine	100.0
cd05578	258	STKc_Yank1 Catalytic domain of the Protein Serine/	100.0
KOG0696	683	consensus Serine/threonine protein kinase [Signal	100.0
PHA02988	283	hypothetical protein; Provisional	100.0
cd06631	265	STKc_YSK4 Catalytic domain of the Protein Serine/T	100.0
cd06641	277	STKc_MST3 Catalytic domain of the Protein Serine/T	100.0
cd05606	278	STKc_beta_ARK Catalytic domain of the Protein Seri	100.0
cd06629	272	STKc_MAPKKK_Bck1_like Catalytic domain of fungal B	100.0
cd05033	266	PTKc_EphR Catalytic domain of Ephrin Receptor Prot	100.0
cd07847	286	STKc_CDKL1_4 Catalytic domain of the Serine/Threon	100.0
cd05068	261	PTKc_Frk_like Catalytic domain of Fyn-related kina	100.0
cd06624	268	STKc_ASK Catalytic domain of the Protein Serine/Th	100.0
cd08218	256	STKc_Nek1 Catalytic domain of the Protein Serine/T	100.0
cd06652	265	STKc_MEKK2 Catalytic domain of the Protein Serine/	100.0
cd05059	256	PTKc_Tec_like Catalytic domain of Tec-like Protein	100.0
cd08224	267	STKc_Nek6_Nek7 Catalytic domain of the Protein Ser	100.0
cd05105	400	PTKc_PDGFR_alpha Catalytic domain of the Protein T	100.0
cd06630	268	STKc_MEKK1 Catalytic domain of the Protein Serine/	100.0
cd05072	261	PTKc_Lyn Catalytic domain of the Protein Tyrosine	100.0
cd05084	252	PTKc_Fes Catalytic domain of the Protein Tyrosine	100.0
KOG0986	591	consensus G protein-coupled receptor kinase [Signa	100.0
cd05032	277	PTKc_InsR_like Catalytic domain of Insulin Recepto	100.0
cd05609	305	STKc_MAST Catalytic domain of the Protein Serine/T	100.0
cd08217	265	STKc_Nek2 Catalytic domain of the Protein Serine/T	100.0
cd05113	256	PTKc_Btk_Bmx Catalytic domain of the Protein Tyros	100.0
cd06632	258	STKc_MEKK1_plant Catalytic domain of the Protein S	100.0
cd05109	279	PTKc_HER2 Catalytic domain of the Protein Tyrosine	100.0
cd05090	283	PTKc_Ror1 Catalytic domain of the Protein Tyrosine	100.0
cd06610	267	STKc_OSR1_SPAK Catalytic domain of the Protein Ser	100.0
cd06626	264	STKc_MEKK4 Catalytic domain of the Protein Serine/	100.0
cd05581	280	STKc_PDK1 Catalytic domain of the Protein Serine/T	100.0
cd07837	295	STKc_CdkB_plant Catalytic domain of the Serine/Thr	100.0
cd08221	256	STKc_Nek9 Catalytic domain of the Protein Serine/T	100.0
cd06651	266	STKc_MEKK3 Catalytic domain of the Protein Serine/	100.0
cd05036	277	PTKc_ALK_LTK Catalytic domain of the Protein Tyros	100.0
cd05098	307	PTKc_FGFR1 Catalytic domain of the Protein Tyrosin	100.0
cd06623	264	PKc_MAPKK_plant_like Catalytic domain of Plant dua	100.0
cd05108	316	PTKc_EGFR Catalytic domain of the Protein Tyrosine	100.0
cd06621	287	PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek	100.0
cd08229	267	STKc_Nek7 Catalytic domain of the Protein Serine/T	100.0
cd05053	293	PTKc_FGFR Catalytic domain of the Protein Tyrosine	100.0
cd06658	292	STKc_PAK5 Catalytic domain of the Protein Serine/T	100.0
cd07831	282	STKc_MOK Catalytic domain of the Serine/Threonine	100.0
KOG0574	502	consensus STE20-like serine/threonine kinase MST [	100.0
cd07846	286	STKc_CDKL2_3 Catalytic domain of the Serine/Threon	100.0
cd05071	262	PTKc_Src Catalytic domain of the Protein Tyrosine	100.0
cd05088	303	PTKc_Tie2 Catalytic domain of the Protein Tyrosine	100.0
cd06620	284	PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr	100.0
cd05055	302	PTKc_PDGFR Catalytic domain of the Protein Tyrosin	100.0
cd05092	280	PTKc_TrkA Catalytic domain of the Protein Tyrosine	100.0
cd07850	353	STKc_JNK Catalytic domain of the Serine/Threonine	100.0
cd06606	260	STKc_MAPKKK Catalytic domain of the Protein Serine	100.0
cd06659	297	STKc_PAK6 Catalytic domain of the Protein Serine/T	100.0
cd05103	343	PTKc_VEGFR2 Catalytic domain of the Protein Tyrosi	100.0
cd06605	265	PKc_MAPKK Catalytic domain of the dual-specificity	100.0
cd05148	261	PTKc_Srm_Brk Catalytic domain of the Protein Tyros	100.0
cd06618	296	PKc_MKK7 Catalytic domain of the dual-specificity	100.0
cd07867	317	STKc_CDC2L6 Catalytic domain of Serine/Threonine K	100.0
cd07833	288	STKc_CDKL Catalytic domain of Cyclin-Dependent pro	100.0
cd07870	291	STKc_PFTAIRE2 Catalytic domain of the Serine/Threo	100.0
cd07842	316	STKc_CDK8_like Catalytic domain of Cyclin-Dependen	100.0
cd05067	260	PTKc_Lck_Blk Catalytic domain of the Protein Tyros	100.0
cd05572	262	STKc_cGK_PKG Catalytic domain of the Protein Serin	100.0
cd05070	260	PTKc_Fyn_Yrk Catalytic domain of the Protein Tyros	100.0
cd08215	258	STKc_Nek Catalytic domain of the Protein Serine/Th	100.0
cd06607	307	STKc_TAO Catalytic domain of the Protein Serine/Th	100.0
KOG0577	948	consensus Serine/threonine protein kinase [Signal	100.0
cd05034	261	PTKc_Src_like Catalytic domain of Src kinase-like	100.0
cd05061	288	PTKc_InsR Catalytic domain of the Protein Tyrosine	100.0
cd07844	291	STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like	100.0
cd05122	253	PKc_STE Catalytic domain of STE family Protein Kin	100.0
cd00192	262	PTKc Catalytic domain of Protein Tyrosine Kinases.	100.0
cd07841	298	STKc_CDK7 Catalytic domain of the Serine/Threonine	100.0
cd05111	279	PTK_HER3 Pseudokinase domain of the Protein Tyrosi	100.0
cd05577	277	STKc_GRK Catalytic domain of the Protein Serine/Th	100.0
cd07865	310	STKc_CDK9 Catalytic domain of the Serine/Threonine	100.0
KOG4645	1509	consensus MAPKKK (MAP kinase kinase kinase) SSK2 a	100.0
cd05611	260	STKc_Rim15_like Catalytic domain of fungal Rim15-l	100.0
cd05101	304	PTKc_FGFR2 Catalytic domain of the Protein Tyrosin	100.0
cd08530	256	STKc_CNK2-like Catalytic domain of the Protein Ser	100.0
KOG0983	391	consensus Mitogen-activated protein kinase (MAPK)	100.0
cd06917	277	STKc_NAK1_like Catalytic domain of Fungal Nak1-lik	100.0
PF07714	259	Pkinase_Tyr: Protein tyrosine kinase Protein kinas	100.0
cd05069	260	PTKc_Yes Catalytic domain of the Protein Tyrosine	100.0
cd05091	283	PTKc_Ror2 Catalytic domain of the Protein Tyrosine	100.0
cd05089	297	PTKc_Tie1 Catalytic domain of the Protein Tyrosine	100.0
cd06614	286	STKc_PAK Catalytic domain of the Protein Serine/Th	100.0
cd05043	280	PTK_Ryk Pseudokinase domain of Ryk (Receptor relat	100.0
cd06648	285	STKc_PAK_II Catalytic domain of the Protein Serine	100.0
cd07845	309	STKc_CDK10 Catalytic domain of the Serine/Threonin	100.0
cd05081	284	PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of	100.0
cd06653	264	STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kina	100.0
cd07849	336	STKc_ERK1_2_like Catalytic domain of Extracellular	100.0
cd05039	256	PTKc_Csk_like Catalytic domain of C-terminal Src k	100.0
KOG0607	463	consensus MAP kinase-interacting kinase and relate	100.0
cd05035	273	PTKc_Axl_like Catalytic Domain of Axl-like Protein	100.0
cd05079	284	PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the	100.0
cd06627	254	STKc_Cdc7_like Catalytic domain of Cell division c	100.0
cd05097	295	PTKc_DDR_like Catalytic domain of Discoidin Domain	100.0
cd05080	283	PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the	100.0
cd05073	260	PTKc_Hck Catalytic domain of the Protein Tyrosine	100.0
cd05065	269	PTKc_EphR_B Catalytic domain of the Protein Tyrosi	100.0
cd05077	262	PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of th	100.0
cd05112	256	PTKc_Itk Catalytic domain of the Protein Tyrosine	100.0
cd07855	334	STKc_ERK5 Catalytic domain of the Serine/Threonine	100.0
KOG0587	953	consensus Traf2- and Nck-interacting kinase and re	100.0
cd07860	284	STKc_CDK2_3 Catalytic domain of the Serine/Threoni	100.0
cd05075	272	PTKc_Axl Catalytic domain of the Protein Tyrosine	100.0
cd05066	267	PTKc_EphR_A Catalytic domain of the Protein Tyrosi	100.0
cd05107	401	PTKc_PDGFR_beta Catalytic domain of the Protein Ty	100.0
cd05579	265	STKc_MAST_like Catalytic domain of Microtubule-ass	100.0
cd05099	314	PTKc_FGFR4 Catalytic domain of the Protein Tyrosin	100.0
KOG4236	888	consensus Serine/threonine protein kinase PKC mu/P	100.0
cd05056	270	PTKc_FAK Catalytic domain of the Protein Tyrosine	100.0
cd05095	296	PTKc_DDR2 Catalytic domain of the Protein Tyrosine	100.0
cd07858	337	STKc_TEY_MAPK_plant Catalytic domain of the Serine	100.0
cd05051	296	PTKc_DDR Catalytic domain of the Protein Tyrosine	100.0
cd05116	257	PTKc_Syk Catalytic domain of the Protein Tyrosine	100.0
PLN00009	294	cyclin-dependent kinase A; Provisional	100.0
cd05078	258	PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain	100.0
cd06616	288	PKc_MKK4 Catalytic domain of the dual-specificity	100.0
cd05063	268	PTKc_EphR_A2 Catalytic domain of the Protein Tyros	100.0
cd07843	293	STKc_CDC2L1 Catalytic domain of the Serine/Threoni	100.0
cd05100	334	PTKc_FGFR3 Catalytic domain of the Protein Tyrosin	100.0
cd07838	287	STKc_CDK4_6_like Catalytic domain of Cyclin-Depend	100.0
cd07854	342	STKc_MAPK4_6 Catalytic domain of the Serine/Threon	100.0
cd05118	283	STKc_CMGC Catalytic domain of CMGC family Serine/T	100.0
cd05041	251	PTKc_Fes_like Catalytic domain of Fes-like Protein	100.0
KOG0666	438	consensus Cyclin C-dependent kinase CDK8 [Transcri	100.0
PHA02882	294	putative serine/threonine kinase; Provisional	100.0
cd07834	330	STKc_MAPK Catalytic domain of the Serine/Threonine	100.0
KOG0695	593	consensus Serine/threonine protein kinase [Signal	100.0
cd05076	274	PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of th	100.0
PHA03210	501	serine/threonine kinase US3; Provisional	100.0
cd05057	279	PTKc_EGFR_like Catalytic domain of Epidermal Growt	100.0
cd06633	313	STKc_TAO3 Catalytic domain of the Protein Serine/T	100.0
KOG0603	612	consensus Ribosomal protein S6 kinase [Signal tran	100.0
cd06657	292	STKc_PAK4 Catalytic domain of the Protein Serine/T	100.0
cd05046	275	PTK_CCK4 Pseudokinase domain of the Protein Tyrosi	100.0
cd05045	290	PTKc_RET Catalytic domain of the Protein Tyrosine	100.0
cd07835	283	STKc_CDK1_like Catalytic domain of Cyclin-Dependen	100.0
cd05576	237	STKc_RPK118_like Catalytic domain of the Protein S	100.0
cd05082	256	PTKc_Csk Catalytic domain of the Protein Tyrosine	100.0
cd05050	288	PTKc_Musk Catalytic domain of the Protein Tyrosine	100.0
cd08225	257	STKc_Nek5 Catalytic domain of the Protein Serine/T	100.0
cd08528	269	STKc_Nek10 Catalytic domain of the Protein Serine/	100.0
cd05040	257	PTKc_Ack_like Catalytic domain of the Protein Tyro	100.0
cd06635	317	STKc_TAO1 Catalytic domain of the Protein Serine/T	100.0
cd08226	328	PK_STRAD_beta Pseudokinase domain of STE20-related	100.0
cd08222	260	STKc_Nek11 Catalytic domain of the Protein Serine/	100.0
cd07836	284	STKc_Pho85 Catalytic domain of the Serine/Threonin	100.0
cd08216	314	PK_STRAD Pseudokinase domain of STE20-related kina	100.0
cd05115	257	PTKc_Zap-70 Catalytic domain of the Protein Tyrosi	100.0
smart00219	258	TyrKc Tyrosine kinase, catalytic domain. Phosphotr	100.0
cd05060	257	PTKc_Syk_like Catalytic domain of Spleen Tyrosine	100.0
cd05110	303	PTKc_HER4 Catalytic domain of the Protein Tyrosine	100.0
cd07830	283	STKc_MAK_like Catalytic domain of Male germ cell-A	100.0
PTZ00024	335	cyclin-dependent protein kinase; Provisional	100.0
cd05613	290	STKc_MSK1_N N-terminal catalytic domain of the Pro	100.0
cd05123	250	STKc_AGC Catalytic domain of AGC family Protein Se	100.0
cd05085	250	PTKc_Fer Catalytic domain of the Protein Tyrosine	100.0
cd05042	269	PTKc_Aatyk Catalytic domain of the Protein Tyrosin	100.0
cd07829	282	STKc_CDK_like Catalytic domain of Cyclin-Dependent	100.0
cd07851	343	STKc_p38 Catalytic domain of the Serine/Threonine	100.0
cd05087	269	PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein	100.0
cd05583	288	STKc_MSK_N N-terminal catalytic domain of the Prot	100.0
cd05038	284	PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the P	100.0
cd05044	269	PTKc_c-ros Catalytic domain of the Protein Tyrosin	100.0
cd07880	343	STKc_p38gamma_MAPK12 Catalytic domain of the Serin	100.0
cd07856	328	STKc_Sty1_Hog1 Catalytic domain of the Serine/Thre	100.0
cd05037	259	PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the	100.0
PLN03225	566	Serine/threonine-protein kinase SNT7; Provisional	100.0
KOG4250	732	consensus TANK binding protein kinase TBK1 [Signal	100.0
cd07866	311	STKc_BUR1 Catalytic domain of the Serine/Threonine	100.0
cd05058	262	PTKc_Met_Ron Catalytic domain of the Protein Tyros	100.0
cd07857	332	STKc_MPK1 Catalytic domain of the Serine/Threonine	100.0
cd07840	287	STKc_CDK9_like Catalytic domain of Cyclin-Dependen	100.0
KOG1290	590	consensus Serine/threonine protein kinase [Signal	100.0
cd06634	308	STKc_TAO2 Catalytic domain of the Protein Serine/T	100.0
cd05083	254	PTKc_Chk Catalytic domain of the Protein Tyrosine	100.0
cd07852	337	STKc_MAPK15 Catalytic domain of the Serine/Threoni	100.0
cd07877	345	STKc_p38alpha_MAPK14 Catalytic domain of the Serin	100.0
KOG0670	752	consensus U4/U6-associated splicing factor PRP4 [R	100.0
cd05086	268	PTKc_Aatyk2 Catalytic domain of the Protein Tyrosi	100.0
cd05047	270	PTKc_Tie Catalytic domain of Tie Protein Tyrosine	100.0
cd07879	342	STKc_p38delta_MAPK13 Catalytic domain of the Serin	100.0
cd07864	302	STKc_CDK12 Catalytic domain of the Serine/Threonin	100.0
cd05610	669	STKc_MASTL Catalytic domain of the Protein Serine/	100.0
KOG1187	361	consensus Serine/threonine protein kinase [Signal	100.0
KOG0669	376	consensus Cyclin T-dependent kinase CDK9 [Cell cyc	100.0
KOG0584	632	consensus Serine/threonine protein kinase [General	100.0
cd05074	273	PTKc_Tyro3 Catalytic domain of the Protein Tyrosin	100.0
KOG0662	292	consensus Cyclin-dependent kinase CDK5 [Intracellu	100.0
KOG2052	513	consensus Activin A type IB receptor, serine/threo	100.0
KOG0194	474	consensus Protein tyrosine kinase [Signal transduc	100.0
KOG1095	1025	consensus Protein tyrosine kinase [Signal transduc	100.0
KOG1026	774	consensus Nerve growth factor receptor TRKA and re	100.0
KOG1151	775	consensus Tousled-like protein kinase [Signal tran	100.0
KOG3653	534	consensus Transforming growth factor beta/activin	100.0
KOG0608	1034	consensus Warts/lats-like serine threonine kinases	100.0
KOG0614	732	consensus cGMP-dependent protein kinase [Signal tr	100.0
KOG0668	338	consensus Casein kinase II, alpha subunit [Signal	100.0
KOG1035	1351	consensus eIF-2alpha kinase GCN2 [Translation, rib	100.0
KOG0665	369	consensus Jun-N-terminal kinase (JNK) [Signal tran	100.0
KOG1006	361	consensus Mitogen-activated protein kinase (MAPK)	100.0
KOG4257	974	consensus Focal adhesion tyrosine kinase FAK, cont	100.0
smart00220	244	S_TKc Serine/Threonine protein kinases, catalytic	100.0
KOG1027	903	consensus Serine/threonine protein kinase and endo	99.98
KOG0199	1039	consensus ACK and related non-receptor tyrosine ki	99.98
PLN03224	507	probable serine/threonine protein kinase; Provisio	99.97
KOG0664	449	consensus Nemo-like MAPK-related serine/threonine	99.97
PLN00113	968	leucine-rich repeat receptor-like protein kinase;	99.97
KOG1094	807	consensus Discoidin domain receptor DDR1 [Signal t	99.97
KOG4278	1157	consensus Protein tyrosine kinase [Signal transduc	99.97
KOG1166	974	consensus Mitotic checkpoint serine/threonine prot	99.97
KOG0196	996	consensus Tyrosine kinase, EPH (ephrin) receptor f	99.97
KOG0576	829	consensus Mitogen-activated protein kinase kinase	99.97
KOG0984	282	consensus Mitogen-activated protein kinase (MAPK)	99.97
KOG1152	772	consensus Signal transduction serine/threonine kin	99.96
KOG1167	418	consensus Serine/threonine protein kinase of the C	99.96
cd00180	215	PKc Catalytic domain of Protein Kinases. Protein K	99.96
KOG0200	609	consensus Fibroblast/platelet-derived growth facto	99.96
KOG1025	1177	consensus Epidermal growth factor receptor EGFR an	99.96
KOG1345	378	consensus Serine/threonine kinase [Signal transduc	99.96
smart00750	176	KIND kinase non-catalytic C-lobe domain. It is an	99.95
PLN00181	793	protein SPA1-RELATED; Provisional	99.95
KOG1165	449	consensus Casein kinase (serine/threonine/tyrosine	99.95
smart00221	225	STYKc Protein kinase; unclassified specificity. Ph	99.95
KOG1024	563	consensus Receptor-like protein tyrosine kinase RY	99.94
KOG1163	341	consensus Casein kinase (serine/threonine/tyrosine	99.93
KOG1164	322	consensus Casein kinase (serine/threonine/tyrosine	99.93
KOG0590	601	consensus Checkpoint kinase and related serine/thr	99.92
PF14531	288	Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_	99.92
PRK09188	365	serine/threonine protein kinase; Provisional	99.9
COG0515	384	SPS1 Serine/threonine protein kinase [General func	99.88
KOG1240	1431	consensus Protein kinase containing WD40 repeats [	99.88
KOG4158	598	consensus BRPK/PTEN-induced protein kinase [Signal	99.87
PRK10359	232	lipopolysaccharide core biosynthesis protein; Prov	99.86
cd05147	190	RIO1_euk RIO kinase family; eukaryotic RIO1, catal	99.85
KOG0603	612	consensus Ribosomal protein S6 kinase [Signal tran	99.84
KOG0606	1205	consensus Microtubule-associated serine/threonine	99.83
cd05145	190	RIO1_like RIO kinase family; RIO1, RIO3 and simila	99.82
KOG1033	516	consensus eIF-2alpha kinase PEK/EIF2AK3 [Translati	99.79
PRK12274	218	serine/threonine protein kinase; Provisional	99.79
KOG0195	448	consensus Integrin-linked kinase [Signal transduct	99.77
smart00090	237	RIO RIO-like kinase.	99.77
KOG1023	484	consensus Natriuretic peptide receptor, guanylate	99.74
PRK10345	210	hypothetical protein; Provisional	99.7
PRK14879	211	serine/threonine protein kinase; Provisional	99.69
KOG0590	601	consensus Checkpoint kinase and related serine/thr	99.67
cd05144	198	RIO2_C RIO kinase family; RIO2, C-terminal catalyt	99.66
TIGR03724	199	arch_bud32 Kae1-associated kinase Bud32. Members o	99.66
cd05119	187	RIO RIO kinase family, catalytic domain. The RIO k	99.62
KOG1266	458	consensus Protein kinase [Signal transduction mech	99.61
PRK09605	535	bifunctional UGMP family protein/serine/threonine	99.6
PRK01723	239	3-deoxy-D-manno-octulosonic-acid kinase; Reviewed	99.53
cd05120	155	APH_ChoK_like Aminoglycoside 3'-phosphotransferase	99.49
KOG0601	524	consensus Cyclin-dependent kinase WEE1 [Cell cycle	99.47
TIGR01982	437	UbiB 2-polyprenylphenol 6-hydroxylase. This model	99.45
cd05146	197	RIO3_euk RIO kinase family; eukaryotic RIO3, catal	99.42
PRK04750	537	ubiB putative ubiquinone biosynthesis protein UbiB	99.42
KOG0606	1205	consensus Microtubule-associated serine/threonine	99.38
KOG3087	229	consensus Serine/threonine protein kinase [General	99.28
KOG0601	524	consensus Cyclin-dependent kinase WEE1 [Cell cycle	99.23
COG3642	204	Mn2+-dependent serine/threonine protein kinase [Si	99.23
cd05151	170	ChoK Choline Kinase (ChoK). The ChoK subfamily is	99.22
KOG1243	690	consensus Protein kinase [General function predict	99.18
KOG3741	655	consensus Poly(A) ribonuclease subunit [RNA proces	98.93
PRK15123	268	lipopolysaccharide core heptose(I) kinase RfaP; Pr	98.93
PF01163	188	RIO1: RIO1 family; InterPro: IPR018934 Protein pho	98.89
KOG2137	700	consensus Protein kinase [Signal transduction mech	98.84
cd05154	223	ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 an	98.84
COG4248	637	Uncharacterized protein with protein kinase and he	98.81
COG0661	517	AarF Predicted unusual protein kinase [General fun	98.81
COG0478	304	RIO-like serine/threonine protein kinase fused to	98.8
PF06176	229	WaaY: Lipopolysaccharide core biosynthesis protein	98.74
PF06293	206	Kdo: Lipopolysaccharide kinase (Kdo/WaaP) family;	98.66
PRK09902	216	hypothetical protein; Provisional	98.56
COG1718	268	RIO1 Serine/threonine protein kinase involved in c	98.51
KOG1235	538	consensus Predicted unusual protein kinase [Genera	98.3
TIGR02172	226	Fb_sc_TIGR02172 Fibrobacter succinogenes paralogou	98.11
PF01636	239	APH: Phosphotransferase enzyme family This family	97.96
cd05150	244	APH Aminoglycoside 3'-phosphotransferase (APH). Th	97.9
COG2112	201	Predicted Ser/Thr protein kinase [Signal transduct	97.86
KOG1035	1351	consensus eIF-2alpha kinase GCN2 [Translation, rib	97.86
PF10707	199	YrbL-PhoP_reg: PhoP regulatory network protein Yrb	97.78
KOG2268	465	consensus Serine/threonine protein kinase [Signal	97.61
KOG0576	829	consensus Mitogen-activated protein kinase kinase	97.58
KOG2270	520	consensus Serine/threonine protein kinase involved	97.55
PF13095	207	FTA2: Kinetochore Sim4 complex subunit FTA2	97.52
cd05155	235	APH_ChoK_like_1 Uncharacterized bacterial proteins	97.36
cd05153	296	HomoserineK_II Homoserine Kinase, type II. Homoser	97.32
PRK05231	319	homoserine kinase; Provisional	97.32
PRK09550	401	mtnK methylthioribose kinase; Reviewed	97.28
PLN02876	822	acyl-CoA dehydrogenase	97.22
TIGR00938	307	thrB_alt homoserine kinase, Neisseria type. Homose	97.17
cd05157	235	ETNK_euk Ethanolamine kinase (ETNK) in eukaryotes.	97.1
PF12260	188	PIP49_C: Protein-kinase domain of FAM69; InterPro:	97.07
KOG1826	2724	consensus Ras GTPase activating protein RasGAP/neu	96.74
TIGR02721	256	ycfN_thiK thiamine kinase. Members of this family	96.72
COG3173	321	Predicted aminoglycoside phosphotransferase [Gener	96.7
cd05156	302	ChoK_euk Choline Kinase (ChoK) in eukaryotes. The	96.16
TIGR01767	370	MTRK 5-methylthioribose kinase. This enzyme is inv	96.13
COG5072	488	ALK1 Serine/threonine kinase of the haspin family	96.13
COG2334	331	Putative homoserine kinase type II (protein kinase	96.02
PLN02756	418	S-methyl-5-thioribose kinase	95.9
KOG1236	565	consensus Predicted unusual protein kinase [Genera	95.81
TIGR02904	309	spore_ysxE spore coat protein YsxE. Members of thi	95.6
PLN02236	344	choline kinase	95.57
PRK10593	297	hypothetical protein; Provisional	95.37
PRK11768	325	serine/threonine protein kinase; Provisional	95.31
cd05152	276	MPH2' Macrolide 2'-Phosphotransferase (MPH2'). MPH	95.24
PRK12396	409	5-methylribose kinase; Reviewed	95.13
KOG1093	725	consensus Predicted protein kinase (contains TBC a	95.04
PF03881	288	Fructosamin_kin: Fructosamine kinase; InterPro: IP	94.58
PLN02421	330	phosphotransferase, alcohol group as acceptor/kina	94.43
PRK06148	1013	hypothetical protein; Provisional	94.21
PHA03111	444	Ser/Thr kinase; Provisional	93.46
PF05445	434	Pox_ser-thr_kin: Poxvirus serine/threonine protein	93.39
TIGR02906	313	spore_CotS spore coat protein, CotS family. Member	92.7
PF07387	308	Seadorna_VP7: Seadornavirus VP7; InterPro: IPR0099	92.07
PTZ00384	383	choline kinase; Provisional	91.26

>KOG0615 consensus Serine/threonine protein kinase Chk2 and related proteins [Cell cycle control, cell division, chromosome partitioning]

Probab=100.00  E-value=1.4e-51  Score=358.88  Aligned_cols=253  Identities=22%  Similarity=0.245  Sum_probs=210.5

Q ss_pred             cCeeEEEEEEeeccCceEEEEEEecCCCCceEEEEecCCCCChH-------HHHHHHHHhhhccccccccccceeeeccc
Q 018699           46 GGKKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFPWE-------FYMYRQLDQRISGRERSSFGFAHRIHLYS  118 (351)
Q Consensus        46 ~~~~Y~i~~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~~~e-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  118 (351)
                      ..+.|.+.+.||+|+||.|-+|. +..+|+.||||++.+.....       ..-.+...+.+....||+++.+++++..+
T Consensus       170 ~~d~yii~~~LGsGafg~Vkla~-e~~tgk~vAiKIi~krk~~~~s~~~~~~~~v~~EieILkkL~HP~IV~~~d~f~~~  248 (475)
T KOG0615|consen  170 FNDYYIISKTLGSGAFGLVKLAY-EKKTGKQVAIKIINKRKSTGCSRAIAKTRDVQNEIEILKKLSHPNIVRIKDFFEVP  248 (475)
T ss_pred             hcceeEeeeeecCCceeEEEEEE-EcccCcEEEeeeeehhhcccccccccchhhhHHHHHHHHhcCCCCEEEEeeeeecC
Confidence            46889999999999999999999 78999999999987542211       11112223445567889999999999999


Q ss_pred             CeeEEEEEecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeeccCCC
Q 018699          119 DYSILVCDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRS  198 (351)
Q Consensus       119 ~~~~lv~e~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~~~  198 (351)
                      ++.|+||||++||.|.+.+..    ++.+.+.....+++|++.|+.|||++||+||||||+|||+..+.           
T Consensus       249 ds~YmVlE~v~GGeLfd~vv~----nk~l~ed~~K~~f~Qll~avkYLH~~GI~HRDiKPeNILl~~~~-----------  313 (475)
T KOG0615|consen  249 DSSYMVLEYVEGGELFDKVVA----NKYLREDLGKLLFKQLLTAVKYLHSQGIIHRDIKPENILLSNDA-----------  313 (475)
T ss_pred             CceEEEEEEecCccHHHHHHh----ccccccchhHHHHHHHHHHHHHHHHcCcccccCCcceEEeccCC-----------
Confidence            999999999999999999988    68899999999999999999999999999999999999999654           


Q ss_pred             CCcccCCeEEeecCCccccccCCCCccccccccCCCcccceeccCCCC---CccchHhHHHHHHHHHHhCccccccccCC
Q 018699          199 GPWQDQGLCLVDWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQEKKPW---KFQVDTYGLCAIVHMMLHNSYMEIEKKAS  275 (351)
Q Consensus       199 ~~~~~~~~~l~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~---~~~~DiwslG~il~~l~~g~~p~~~~~~~  275 (351)
                         .+..+||+|||+|...   .+.+...+.||||.|.|||++.++..   ..++|||||||++|-+++|.+||......
T Consensus       314 ---e~~llKItDFGlAK~~---g~~sfm~TlCGTpsYvAPEVl~~kg~~~~~~kVDiWSlGcvLfvcLsG~pPFS~~~~~  387 (475)
T KOG0615|consen  314 ---EDCLLKITDFGLAKVS---GEGSFMKTLCGTPSYVAPEVLASKGVEYYPSKVDIWSLGCVLFVCLSGYPPFSEEYTD  387 (475)
T ss_pred             ---cceEEEecccchhhcc---ccceehhhhcCCccccChhheecCCeecccchheeeeccceEEEEeccCCCcccccCC
Confidence               3466999999999643   46777899999999999999976543   35889999999999999999999987665


Q ss_pred             C-------CCceeeecCcchhhhhHH--HHHHHHHHHHhcCCCCCChHHHHHHHHHHHH
Q 018699          276 P-------DGGLVYLPKLSFKRYWKV--ELWKSLFTNLLNMSSGNDKEVLQNLQKSFQD  325 (351)
Q Consensus       276 ~-------~~~~~~~~~~~~~~~~~~--~~~~~li~~~L~~dP~~R~s~~e~l~~~~~~  325 (351)
                      .       .+.|.+.     |..|..  ++.++||++||..||++||+++++|+|||..
T Consensus       388 ~sl~eQI~~G~y~f~-----p~~w~~Iseea~dlI~~mL~VdP~~R~s~~eaL~hpW~~  441 (475)
T KOG0615|consen  388 PSLKEQILKGRYAFG-----PLQWDRISEEALDLINWMLVVDPENRPSADEALNHPWFK  441 (475)
T ss_pred             ccHHHHHhcCccccc-----ChhhhhhhHHHHHHHHHhhEeCcccCcCHHHHhcChhhh
Confidence            3       2333322     233332  8899999999999999999999999999743

>KOG0575 consensus Polo-like serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=100.00  E-value=6.8e-51  Score=370.98  Aligned_cols=254  Identities=21%  Similarity=0.258  Sum_probs=222.9

Q ss_pred             cCeeEEEEEEeeccCceEEEEEEecCCCCceEEEEecCCCCCh---HHHHHHHHHhhhccccccccccceeeecccCeeE
Q 018699           46 GGKKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFPW---EFYMYRQLDQRISGRERSSFGFAHRIHLYSDYSI  122 (351)
Q Consensus        46 ~~~~Y~i~~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~~~---e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  122 (351)
                      ...+|...+.||+|||+.+|.++ +..+|+.||+|++.+....   ..+.+....+....+.|++++.++..+.+.+++|
T Consensus        16 ~~~~Y~~g~~LGkGgFA~cYe~~-~~~tge~~A~KvVpk~~l~k~~~reKv~~EIeIHr~L~HpnIV~f~~~FEDs~nVY   94 (592)
T KOG0575|consen   16 RSKRYKRGRFLGKGGFARCYEAR-DLDTGEVVAVKVVPKKLLKKPKQREKVLNEIEIHRSLKHPNIVQFYHFFEDSNNVY   94 (592)
T ss_pred             CcceeeeeeeeccCcceEEEEEE-EcCCCcEEEEEEeehHHhcCcchHHHHHHHHHHHHhcCCCcEEeeeeEeecCCceE
Confidence            34689999999999999999999 6788999999998864322   2233333345567788999999999999999999


Q ss_pred             EEEEecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeeccCCCCCcc
Q 018699          123 LVCDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSGPWQ  202 (351)
Q Consensus       123 lv~e~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~~~~~~~  202 (351)
                      +|+|+|+.++|..++++    .++++|.+++.+++||+.|+.|||+++|+|||||..|+|++                 .
T Consensus        95 ivLELC~~~sL~el~Kr----rk~ltEpEary~l~QIv~GlkYLH~~~IiHRDLKLGNlfL~-----------------~  153 (592)
T KOG0575|consen   95 IVLELCHRGSLMELLKR----RKPLTEPEARYFLRQIVEGLKYLHSLGIIHRDLKLGNLFLN-----------------E  153 (592)
T ss_pred             EEEEecCCccHHHHHHh----cCCCCcHHHHHHHHHHHHHHHHHHhcCceecccchhheeec-----------------C
Confidence            99999999999999996    58999999999999999999999999999999999999999                 7


Q ss_pred             cCCeEEeecCCccccccCCCCccccccccCCCcccceeccCCCCCccchHhHHHHHHHHHHhCccccccccCCCCCceee
Q 018699          203 DQGLCLVDWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQEKKPWKFQVDTYGLCAIVHMMLHNSYMEIEKKASPDGGLVY  282 (351)
Q Consensus       203 ~~~~~l~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~p~~~~~~~~~~~~~~  282 (351)
                      +..+||+|||+|....  .+.....+.||||.|+|||++.+...++.+||||+||++|.|++|++||...+-......+.
T Consensus       154 ~~~VKIgDFGLAt~le--~~~Erk~TlCGTPNYIAPEVl~k~gHsfEvDiWSlGcvmYtLL~G~PPFetk~vkety~~Ik  231 (592)
T KOG0575|consen  154 NMNVKIGDFGLATQLE--YDGERKKTLCGTPNYIAPEVLNKSGHSFEVDIWSLGCVMYTLLVGRPPFETKTVKETYNKIK  231 (592)
T ss_pred             cCcEEecccceeeeec--CcccccceecCCCcccChhHhccCCCCCchhhhhhhhHHHhhhhCCCCcccchHHHHHHHHH
Confidence            8889999999997654  33456678899999999999999999999999999999999999999999876655556666


Q ss_pred             ecCcchhhhhHHHHHHHHHHHHhcCCCCCChHHHHHHHHHHH
Q 018699          283 LPKLSFKRYWKVELWKSLFTNLLNMSSGNDKEVLQNLQKSFQ  324 (351)
Q Consensus       283 ~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~~~~~  324 (351)
                      .....+|...+ ..+++||.+||++||.+|||+.++|.|+|.
T Consensus       232 ~~~Y~~P~~ls-~~A~dLI~~lL~~~P~~Rpsl~~vL~h~Ff  272 (592)
T KOG0575|consen  232 LNEYSMPSHLS-AEAKDLIRKLLRPNPSERPSLDEVLDHPFF  272 (592)
T ss_pred             hcCcccccccC-HHHHHHHHHHhcCCcccCCCHHHHhcCHhh
Confidence            67777777777 899999999999999999999999999875

>KOG0598 consensus Ribosomal protein S6 kinase and related proteins [General function prediction only; Signal transduction mechanisms]

Probab=100.00  E-value=8.5e-50  Score=344.76  Aligned_cols=257  Identities=21%  Similarity=0.229  Sum_probs=216.0

Q ss_pred             EEcCeeEEEEEEeeccCceEEEEEEecCCCCceEEEEecCCCCCh---HHHHHHHHHhhhccccccccccceeeecccCe
Q 018699           44 EIGGKKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFPW---EFYMYRQLDQRISGRERSSFGFAHRIHLYSDY  120 (351)
Q Consensus        44 ~i~~~~Y~i~~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~~~---e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  120 (351)
                      .+..+.|++.+.||+|+||.||+++ +.++++.+|+|++++....   +..........+....||.++....-++.+..
T Consensus        21 ~~~~~dF~~lkviGkG~fGkV~~Vr-k~dt~kiYAmKvl~K~~iv~~~e~~~~~~Er~IL~~v~hPFiv~l~ysFQt~~k   99 (357)
T KOG0598|consen   21 MVGPDDFEILKVIGKGSFGKVFQVR-KKDTGKIYAMKVLKKKKIVEKKEVRHTKAERNILSKIKHPFIVKLIYSFQTEEK   99 (357)
T ss_pred             cCChhheeeeeeeeccCCceEEEEE-EcccCceeehhhhhhhHhhhhhhHHHHHHHHHHHHhCCCCcEeeeEEecccCCe
Confidence            3456799999999999999999999 6799999999999876443   33333333444556788899998888999999


Q ss_pred             eEEEEEecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeeccCCCCC
Q 018699          121 SILVCDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSGP  200 (351)
Q Consensus       121 ~~lv~e~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~~~~~  200 (351)
                      +|+|+||+.||.|...+++    .+.+++..++.++.+|+.||.|||++||+||||||+|||+|                
T Consensus       100 LylVld~~~GGeLf~hL~~----eg~F~E~~arfYlaEi~lAL~~LH~~gIiyRDlKPENILLd----------------  159 (357)
T KOG0598|consen  100 LYLVLDYLNGGELFYHLQR----EGRFSEDRARFYLAEIVLALGYLHSKGIIYRDLKPENILLD----------------  159 (357)
T ss_pred             EEEEEeccCCccHHHHHHh----cCCcchhHHHHHHHHHHHHHHHHHhCCeeeccCCHHHeeec----------------
Confidence            9999999999999999998    57899999999999999999999999999999999999999                


Q ss_pred             cccCCeEEeecCCccccccCCCCccccccccCCCcccceeccCCCCCccchHhHHHHHHHHHHhCccccccccCCCCCce
Q 018699          201 WQDQGLCLVDWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQEKKPWKFQVDTYGLCAIVHMMLHNSYMEIEKKASPDGGL  280 (351)
Q Consensus       201 ~~~~~~~l~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~p~~~~~~~~~~~~  280 (351)
                       .+|.++|+|||++...-  ..+....+.|||+.|||||++.+.+|+.++|+||||+++|+|++|.+||...+.......
T Consensus       160 -~~GHi~LtDFgL~k~~~--~~~~~t~tfcGT~eYmAPEil~~~gy~~~vDWWsLGillYeML~G~pPF~~~~~~~~~~~  236 (357)
T KOG0598|consen  160 -EQGHIKLTDFGLCKEDL--KDGDATRTFCGTPEYMAPEILLGKGYDKAVDWWSLGILLYEMLTGKPPFYAEDVKKMYDK  236 (357)
T ss_pred             -CCCcEEEeccccchhcc--cCCCccccccCCccccChHHHhcCCCCcccchHhHHHHHHHHhhCCCCCcCccHHHHHHH
Confidence             89999999999997422  234456678999999999999999999999999999999999999999998775433333


Q ss_pred             eeecC-cchhhhhHHHHHHHHHHHHhcCCCCCCh----HHHHHHHHHHHH
Q 018699          281 VYLPK-LSFKRYWKVELWKSLFTNLLNMSSGNDK----EVLQNLQKSFQD  325 (351)
Q Consensus       281 ~~~~~-~~~~~~~~~~~~~~li~~~L~~dP~~R~----s~~e~l~~~~~~  325 (351)
                      +...+ ...|..++ ...++||+++|..||+.|.    .+.++-+|||..
T Consensus       237 I~~~k~~~~p~~ls-~~ardll~~LL~rdp~~RLg~~~d~~~ik~HpfF~  285 (357)
T KOG0598|consen  237 ILKGKLPLPPGYLS-EEARDLLKKLLKRDPRQRLGGPGDAEEIKRHPFFK  285 (357)
T ss_pred             HhcCcCCCCCccCC-HHHHHHHHHHhccCHHHhcCCCCChHHhhcCcccc
Confidence            33344 44555577 8999999999999999996    466666788633

>KOG0581 consensus Mitogen-activated protein kinase kinase (MAP2K) [Signal transduction mechanisms]

Probab=100.00  E-value=3.6e-49  Score=341.00  Aligned_cols=255  Identities=18%  Similarity=0.166  Sum_probs=210.9

Q ss_pred             EcCeeEEEEEEeeccCceEEEEEEecCCCCceEEEEecCCCCChHH--HHHHHHHhhhccccccccccceeeecccC-ee
Q 018699           45 IGGKKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFPWEF--YMYRQLDQRISGRERSSFGFAHRIHLYSD-YS  121 (351)
Q Consensus        45 i~~~~Y~i~~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~~~e~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~  121 (351)
                      +.-.+.+..+.||.|..|+||+|+ +..+++.+|+|++......+.  ++++++. .+....+++++..+..+...+ ..
T Consensus        76 i~~~dle~~~~lG~G~gG~V~kv~-Hk~t~~i~AlK~I~~~~~~~~~~Qi~rEl~-il~~~~spyIV~~ygaF~~~~~~i  153 (364)
T KOG0581|consen   76 ISLSDLERLGVLGSGNGGTVYKVR-HKPTGKIYALKVILLNIDPALQKQILRELE-ILRSCQSPYIVGFYGAFYSNGEEI  153 (364)
T ss_pred             cCHHHhhhhhhcccCCCcEEEEEE-EcCCCeEEEEEeecccCCHHHHHHHHHHHH-HHhhCCCCCeeeEeEEEEeCCceE
Confidence            444588999999999999999999 578999999999854433221  2222222 223336788888888888877 59


Q ss_pred             EEEEEecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHH-CCceecCCCCCcEEEeecCCcceeeccCCCCC
Q 018699          122 ILVCDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHD-VGIIHGDFKPDNLLIRYARDELTVLDHDRSGP  200 (351)
Q Consensus       122 ~lv~e~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~-~~i~H~dl~p~Nill~~~~~~~~~~~~~~~~~  200 (351)
                      +++||||.+|+|++++..    .+.+++.....++.+++.||.|||+ ++|+||||||+|||++                
T Consensus       154 sI~mEYMDgGSLd~~~k~----~g~i~E~~L~~ia~~VL~GL~YLh~~~~IIHRDIKPsNlLvN----------------  213 (364)
T KOG0581|consen  154 SICMEYMDGGSLDDILKR----VGRIPEPVLGKIARAVLRGLSYLHEERKIIHRDIKPSNLLVN----------------  213 (364)
T ss_pred             EeehhhcCCCCHHHHHhh----cCCCCHHHHHHHHHHHHHHHHHHhhccCeeeccCCHHHeeec----------------
Confidence            999999999999999987    3789999999999999999999995 8999999999999999                


Q ss_pred             cccCCeEEeecCCccccccCCCCccccccccCCCcccceeccCCCCCccchHhHHHHHHHHHHhCccccccccCCCCCc-
Q 018699          201 WQDQGLCLVDWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQEKKPWKFQVDTYGLCAIVHMMLHNSYMEIEKKASPDGG-  279 (351)
Q Consensus       201 ~~~~~~~l~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~p~~~~~~~~~~~-  279 (351)
                       +.|.+||||||.+..+.    +.--.+.+||..|||||.+.+..|+.++||||||+.++||.+|++|+....+..... 
T Consensus       214 -skGeVKicDFGVS~~lv----nS~a~tfvGT~~YMsPERi~g~~Ys~~sDIWSLGLsllE~a~GrfP~~~~~~~~~~~~  288 (364)
T KOG0581|consen  214 -SKGEVKICDFGVSGILV----NSIANTFVGTSAYMSPERISGESYSVKSDIWSLGLSLLELAIGRFPYPPPNPPYLDIF  288 (364)
T ss_pred             -cCCCEEeccccccHHhh----hhhcccccccccccChhhhcCCcCCcccceecccHHHHHHhhCCCCCCCcCCCCCCHH
Confidence             89999999999886543    334467889999999999999999999999999999999999999998762221111 


Q ss_pred             ----e-eeecCcchhhh-hHHHHHHHHHHHHhcCCCCCChHHHHHHHHHHHHHH
Q 018699          280 ----L-VYLPKLSFKRY-WKVELWKSLFTNLLNMSSGNDKEVLQNLQKSFQDYL  327 (351)
Q Consensus       280 ----~-~~~~~~~~~~~-~~~~~~~~li~~~L~~dP~~R~s~~e~l~~~~~~~~  327 (351)
                          . ...+++..|.. |+ +++++||.+||++||.+|+++.|+++|||....
T Consensus       289 ~Ll~~Iv~~ppP~lP~~~fS-~ef~~FV~~CL~Kdp~~R~s~~qLl~Hpfi~~~  341 (364)
T KOG0581|consen  289 ELLCAIVDEPPPRLPEGEFS-PEFRSFVSCCLRKDPSERPSAKQLLQHPFIKKF  341 (364)
T ss_pred             HHHHHHhcCCCCCCCcccCC-HHHHHHHHHHhcCCcccCCCHHHHhcCHHHhhc
Confidence                1 23467777776 88 999999999999999999999999999985533

>KOG0592 consensus 3-phosphoinositide-dependent protein kinase (PDK1) [Signal transduction mechanisms]

Probab=100.00  E-value=3.9e-49  Score=354.24  Aligned_cols=252  Identities=20%  Similarity=0.220  Sum_probs=215.2

Q ss_pred             CeeEEEEEEeeccCceEEEEEEecCCCCceEEEEecCCCCCh------HHHHHHHHHhhhccccccccccceeeecccCe
Q 018699           47 GKKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFPW------EFYMYRQLDQRISGRERSSFGFAHRIHLYSDY  120 (351)
Q Consensus        47 ~~~Y~i~~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~~~------e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  120 (351)
                      -.+|.+.+.||.|+|++|++|+ +..+++.+|||++.+....      .+.+++.....+  ..|+.++.+..-+.+...
T Consensus        72 ~~DF~Fg~~lGeGSYStV~~A~-~~~t~keYAiKVl~K~~Iike~KvkYV~~Ek~~l~~L--~~hPgivkLy~TFQD~~s  148 (604)
T KOG0592|consen   72 PNDFKFGKILGEGSYSTVVLAR-EKATGKEYAIKVLDKRYIIKEKKVKYVTREKEALTQL--SGHPGIVKLYFTFQDEES  148 (604)
T ss_pred             hhhcchhheeccccceeEEEee-ecCCCceeeHhhhhHHHHHhhcccchhhHHHHHHHHh--hCCCCeEEEEEEeecccc
Confidence            4789999999999999999999 6789999999998765432      122222222222  278888888888888999


Q ss_pred             eEEEEEecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeeccCCCCC
Q 018699          121 SILVCDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSGP  200 (351)
Q Consensus       121 ~~lv~e~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~~~~~  200 (351)
                      +|+|+||+++|+|.++|++.    +.|++..++.++.||+.||.|||++|||||||||+|||+|                
T Consensus       149 LYFvLe~A~nGdll~~i~K~----Gsfde~caR~YAAeIldAleylH~~GIIHRDlKPENILLd----------------  208 (604)
T KOG0592|consen  149 LYFVLEYAPNGDLLDLIKKY----GSFDETCARFYAAEILDALEYLHSNGIIHRDLKPENILLD----------------  208 (604)
T ss_pred             eEEEEEecCCCcHHHHHHHh----CcchHHHHHHHHHHHHHHHHHHHhcCceeccCChhheeEc----------------
Confidence            99999999999999999996    7899999999999999999999999999999999999999                


Q ss_pred             cccCCeEEeecCCccccccCCCC-----------ccccccccCCCcccceeccCCCCCccchHhHHHHHHHHHHhCcccc
Q 018699          201 WQDQGLCLVDWGRGIDLHLFPDN-----------MEFEGDCRTSGFRCIEMQEKKPWKFQVDTYGLCAIVHMMLHNSYME  269 (351)
Q Consensus       201 ~~~~~~~l~Dfg~a~~~~~~~~~-----------~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~p~  269 (351)
                       .++.++|+|||.|..+......           ....+++||..|.+||++.....++.+|||+||||+|+|+.|.+||
T Consensus       209 -~dmhikITDFGsAK~l~~~~~~~~~~~~~~~a~s~~~SFVGTAeYVSPElL~~~~~~~~sDiWAlGCilyQmlaG~PPF  287 (604)
T KOG0592|consen  209 -KDGHIKITDFGSAKILSPSQKSQENPVDPNQASSRRSSFVGTAEYVSPELLNDSPAGPSSDLWALGCILYQMLAGQPPF  287 (604)
T ss_pred             -CCCcEEEeeccccccCChhhccccCccCcccccCcccceeeeecccCHHHhcCCCCCcccchHHHHHHHHHHhcCCCCC
Confidence             8999999999998765543222           1124578999999999999999999999999999999999999999


Q ss_pred             ccccCCCCCceeeecCcchhhhhHHHHHHHHHHHHhcCCCCCChHHHHHHHHHH
Q 018699          270 IEKKASPDGGLVYLPKLSFKRYWKVELWKSLFTNLLNMSSGNDKEVLQNLQKSF  323 (351)
Q Consensus       270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~~~~  323 (351)
                      ...++-...+.+......+|..+. +.+++||+++|..||.+|+++.|+-+|||
T Consensus       288 ra~NeyliFqkI~~l~y~fp~~fp-~~a~dLv~KLLv~dp~~Rlt~~qIk~HpF  340 (604)
T KOG0592|consen  288 RAANEYLIFQKIQALDYEFPEGFP-EDARDLIKKLLVRDPSDRLTSQQIKAHPF  340 (604)
T ss_pred             ccccHHHHHHHHHHhcccCCCCCC-HHHHHHHHHHHccCccccccHHHHhhCcc
Confidence            987765444445566677777777 99999999999999999999999999986

>KOG0595 consensus Serine/threonine-protein kinase involved in autophagy [Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]

Probab=100.00  E-value=1.1e-47  Score=334.60  Aligned_cols=257  Identities=17%  Similarity=0.154  Sum_probs=209.5

Q ss_pred             CeeEEEEEEeeccCceEEEEEEecCCCCceEEEEecCCCCCh--HHHHHHHHHhhhccccccccccceeeecccCeeEEE
Q 018699           47 GKKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFPW--EFYMYRQLDQRISGRERSSFGFAHRIHLYSDYSILV  124 (351)
Q Consensus        47 ~~~Y~i~~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~~~--e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv  124 (351)
                      .++|.+.+.||+|+||+||+|++ ..++..||||.+.+....  -.+.+......+....|++++.+.++...++++|+|
T Consensus         9 ~~~y~~~~~iG~GsfavVykg~h-~~~~~~VAIK~i~~~~l~~k~~e~L~~Ei~iLkel~H~nIV~l~d~~~~~~~i~lV   87 (429)
T KOG0595|consen    9 VGDYELSREIGSGSFAVVYKGRH-KKSGTEVAIKCIAKKKLNKKLVELLLSEIKILKELKHPNIVRLLDCIEDDDFIYLV   87 (429)
T ss_pred             cccceehhhccCcceEEEEEeEe-ccCCceEEeeeehhhccCHHHHHHHHHHHHHHHhcCCcceeeEEEEEecCCeEEEE
Confidence            36899999999999999999995 566799999999877432  222223333344556689999999999999999999


Q ss_pred             EEecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeeccCCCCCcccC
Q 018699          125 CDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSGPWQDQ  204 (351)
Q Consensus       125 ~e~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~~~~~~~~~  204 (351)
                      ||||.||+|.++++++    +.+++.+++.++.||+.|+++||+++|+||||||+||+++......           ...
T Consensus        88 MEyC~gGDLs~yi~~~----~~l~e~t~r~Fm~QLA~alq~L~~~~IiHRDLKPQNiLLs~~~~~~-----------~~~  152 (429)
T KOG0595|consen   88 MEYCNGGDLSDYIRRR----GRLPEATARHFMQQLASALQFLHENNIIHRDLKPQNILLSTTARND-----------TSP  152 (429)
T ss_pred             EEeCCCCCHHHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCCcceEEeccCCCCC-----------CCc
Confidence            9999999999999984    6899999999999999999999999999999999999999652210           116


Q ss_pred             CeEEeecCCccccccCCCCccccccccCCCcccceeccCCCCCccchHhHHHHHHHHHHhCccccccccCCCCCceee--
Q 018699          205 GLCLVDWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQEKKPWKFQVDTYGLCAIVHMMLHNSYMEIEKKASPDGGLVY--  282 (351)
Q Consensus       205 ~~~l~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~p~~~~~~~~~~~~~~--  282 (351)
                      .+||+|||+|+...   ++.-..+.+|++.|||||++....|+.++|+||+|+|+|+|++|..||...+..+-..+..  
T Consensus       153 ~LKIADFGfAR~L~---~~~~a~tlcGSplYMAPEV~~~~~YdAKADLWSiG~Ilyq~l~g~~Pf~a~t~~eL~~~~~k~  229 (429)
T KOG0595|consen  153 VLKIADFGFARFLQ---PGSMAETLCGSPLYMAPEVIMSQQYDAKADLWSIGTILYQCLTGKPPFDAETPKELLLYIKKG  229 (429)
T ss_pred             eEEecccchhhhCC---chhHHHHhhCCccccCHHHHHhccccchhhHHHHHHHHHHHHhCCCCccccCHHHHHHHHhcc
Confidence            79999999997643   4555678899999999999999999999999999999999999999999766542211111  


Q ss_pred             -ecCcchhhhhHHHHHHHHHHHHhcCCCCCChHHHHHHHHHH
Q 018699          283 -LPKLSFKRYWKVELWKSLFTNLLNMSSGNDKEVLQNLQKSF  323 (351)
Q Consensus       283 -~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~~~~  323 (351)
                       ...+..+...+ ..+.+|+...|..+|..|.+..+.+.|++
T Consensus       230 ~~~~~~~~~~~s-~~~~~Ll~~ll~~~~~~~~~~~~~~~~~~  270 (429)
T KOG0595|consen  230 NEIVPVLPAELS-NPLRELLISLLQRNPKDRISFEDFFDHPF  270 (429)
T ss_pred             ccccCchhhhcc-CchhhhhhHHHhcCccccCchHHhhhhhh
Confidence             12223333334 66779999999999999999999999875

>KOG0605 consensus NDR and related serine/threonine kinases [General function prediction only]

Probab=100.00  E-value=1.1e-47  Score=344.88  Aligned_cols=262  Identities=22%  Similarity=0.252  Sum_probs=209.4

Q ss_pred             CcceEEEEcCeeEEEEEEeeccCceEEEEEEecCCCCceEEEEecCCCCChHHHHH---HHHHhhhccccccccccceee
Q 018699           38 SRNKTIEIGGKKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFPWEFYMY---RQLDQRISGRERSSFGFAHRI  114 (351)
Q Consensus        38 ~~~~~~~i~~~~Y~i~~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~~~e~~~~---~~~~~~~~~~~~~~~~~~~~~  114 (351)
                      .+..+..+..++|++++.||+|+||.||+|+ +..+|+++|+|++++.........   +.....+.....+.++.+.--
T Consensus       131 lR~~R~r~~~~DFe~Lk~IgkGAfGeVrLar-Kk~Tg~iyAmK~LkKS~M~~~~Qv~hV~aERdiL~~~ds~~vVKLyYs  209 (550)
T KOG0605|consen  131 LRLRRTRLSLDDFELLKVIGKGAFGEVRLAR-KKDTGEIYAMKILKKSEMLKKNQVEHVRAERDILAEVDSPWVVKLYYS  209 (550)
T ss_pred             HHhccccCCcccchhheeeccccceeEEEEE-EccCCcEEeeecccHHHHHhhhhHHHHHHHHHHhhhcCCCcEEEEEEE
Confidence            3444456678999999999999999999999 889999999999998755433333   333333444566677777777


Q ss_pred             ecccCeeEEEEEecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeec
Q 018699          115 HLYSDYSILVCDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLD  194 (351)
Q Consensus       115 ~~~~~~~~lv~e~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~  194 (351)
                      ++...++|+||||++||++..++.+    ...|++..++.++.+++.||..+|..|++||||||+|+|||          
T Consensus       210 FQD~~~LYLiMEylPGGD~mTLL~~----~~~L~e~~arfYiaE~vlAI~~iH~~gyIHRDIKPdNlLiD----------  275 (550)
T KOG0605|consen  210 FQDKEYLYLIMEYLPGGDMMTLLMR----KDTLTEDWARFYIAETVLAIESIHQLGYIHRDIKPDNLLID----------  275 (550)
T ss_pred             ecCCCeeEEEEEecCCccHHHHHHh----cCcCchHHHHHHHHHHHHHHHHHHHcCcccccCChhheeec----------
Confidence            8889999999999999999999998    57999999999999999999999999999999999999999          


Q ss_pred             cCCCCCcccCCeEEeecCCcccccc------------------------CCC----Cc-----------------ccccc
Q 018699          195 HDRSGPWQDQGLCLVDWGRGIDLHL------------------------FPD----NM-----------------EFEGD  229 (351)
Q Consensus       195 ~~~~~~~~~~~~~l~Dfg~a~~~~~------------------------~~~----~~-----------------~~~~~  229 (351)
                             ..|.+||+|||++.....                        ++.    ..                 -....
T Consensus       276 -------~~GHiKLSDFGLs~gl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~nrr~~a~St  348 (550)
T KOG0605|consen  276 -------AKGHIKLSDFGLSTGLDKKHRIESYRLDEQMQINLSEAKPSDFPKFNTPRSTMSRREQLQTWKRNRRQLAYST  348 (550)
T ss_pred             -------CCCCEeeccccccchhhhhhhhhhhcchhhhhhhhccCCCccccccccccchhhHHHHHHHHHhhhhhhhhcc
Confidence                   899999999998743211                        000    00                 01134


Q ss_pred             ccCCCcccceeccCCCCCccchHhHHHHHHHHHHhCccccccccCCCCCceee--ecCcchhh--hhHHHHHHHHHHHHh
Q 018699          230 CRTSGFRCIEMQEKKPWKFQVDTYGLCAIVHMMLHNSYMEIEKKASPDGGLVY--LPKLSFKR--YWKVELWKSLFTNLL  305 (351)
Q Consensus       230 ~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~p~~~~~~~~~~~~~~--~~~~~~~~--~~~~~~~~~li~~~L  305 (351)
                      +|||.|+|||++.++.|+..+|+||||||+|||+.|.+||..+++......+.  ......|.  ..+ +++.|||.+||
T Consensus       349 VGTPDYiAPEVll~kgY~~~cDwWSLG~ImyEmLvGyPPF~s~tp~~T~rkI~nwr~~l~fP~~~~~s-~eA~DLI~rll  427 (550)
T KOG0605|consen  349 VGTPDYIAPEVLLGKGYGKECDWWSLGCIMYEMLVGYPPFCSETPQETYRKIVNWRETLKFPEEVDLS-DEAKDLITRLL  427 (550)
T ss_pred             cCCccccchHHHhcCCCCccccHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhhhccCCCcCccc-HHHHHHHHHHh
Confidence            69999999999999999999999999999999999999999988875433321  11122221  122 88999999999


Q ss_pred             cCCCCCChH---HHHHHHHHH
Q 018699          306 NMSSGNDKE---VLQNLQKSF  323 (351)
Q Consensus       306 ~~dP~~R~s---~~e~l~~~~  323 (351)
                      . ||++|.-   +.|+-.|||
T Consensus       428 ~-d~~~RLG~~G~~EIK~HPf  447 (550)
T KOG0605|consen  428 C-DPENRLGSKGAEEIKKHPF  447 (550)
T ss_pred             c-CHHHhcCcccHHHHhcCCc
Confidence            9 9999985   677777986

>KOG0583 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=1.3e-46  Score=342.57  Aligned_cols=257  Identities=19%  Similarity=0.230  Sum_probs=214.0

Q ss_pred             EEcCeeEEEEEEeeccCceEEEEEEecCCCCceEEEEecCCC----CC--hHHHHHHHHHhhhccccccccccceeeecc
Q 018699           44 EIGGKKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPA----FP--WEFYMYRQLDQRISGRERSSFGFAHRIHLY  117 (351)
Q Consensus        44 ~i~~~~Y~i~~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~----~~--~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~  117 (351)
                      ....++|++.+.||.|+||+|+.|+ +..+++.||+|++.+.    ..  ....+.+++...-....|+++.....+...
T Consensus        13 ~~~~g~y~~~~~lG~GsfgkV~~a~-~~~t~~~vAiKii~~~~~~~~~~~~~~~i~rEi~~~~~~~~HpnI~~l~ev~~t   91 (370)
T KOG0583|consen   13 QLSIGKYELGRTLGSGSFGKVKLAK-HRLTGEKVAIKIIDRKKVSSKSQKLDELIKREISILRRLRSHPNIIRLLEVFAT   91 (370)
T ss_pred             ccccCceeeeeeecCCCCeeEEEee-eccCCCeEEEEEechhcccccccccchhhHHHHHHHHHhccCCCEeEEEEEEec
Confidence            3446799999999999999999999 5778899999987764    11  111222233222223337899999999998


Q ss_pred             cCeeEEEEEecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeeccCC
Q 018699          118 SDYSILVCDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDR  197 (351)
Q Consensus       118 ~~~~~lv~e~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~~  197 (351)
                      ...+|+||||+.||+|.+++..    .+++.+..++.++.|++.|++|||++||+||||||+||+++             
T Consensus        92 ~~~~~ivmEy~~gGdL~~~i~~----~g~l~E~~ar~~F~Qlisav~y~H~~gi~HRDLK~ENilld-------------  154 (370)
T KOG0583|consen   92 PTKIYIVMEYCSGGDLFDYIVN----KGRLKEDEARKYFRQLISAVAYCHSRGIVHRDLKPENILLD-------------  154 (370)
T ss_pred             CCeEEEEEEecCCccHHHHHHH----cCCCChHHHHHHHHHHHHHHHHHHhCCEeeCCCCHHHEEec-------------
Confidence            8999999999999999999998    47899999999999999999999999999999999999999             


Q ss_pred             CCCccc-CCeEEeecCCccccccCCCCccccccccCCCcccceeccCCC-CC-ccchHhHHHHHHHHHHhCccccccccC
Q 018699          198 SGPWQD-QGLCLVDWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQEKKP-WK-FQVDTYGLCAIVHMMLHNSYMEIEKKA  274 (351)
Q Consensus       198 ~~~~~~-~~~~l~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~-~~-~~~DiwslG~il~~l~~g~~p~~~~~~  274 (351)
                          .+ +.+||+|||++....  .......+.+||+.|+|||++.+.. |+ .++||||+|+++|.|++|..||...+.
T Consensus       155 ----~~~~~~Kl~DFG~s~~~~--~~~~~l~t~cGsp~Y~aPEvl~~~~~Y~g~~aDvWS~GViLy~ml~G~~PF~d~~~  228 (370)
T KOG0583|consen  155 ----GNEGNLKLSDFGLSAISP--GEDGLLKTFCGSPAYAAPEVLSGKGTYSGKAADVWSLGVILYVLLCGRLPFDDSNV  228 (370)
T ss_pred             ----CCCCCEEEeccccccccC--CCCCcccCCCCCcccCCHHHhCCCCCcCCchhhhhhhHHHHHHHHhCCCCCCCccH
Confidence                56 789999999996532  3455678889999999999999977 86 999999999999999999999998665


Q ss_pred             CCCCceeeecCcchhhhh-HHHHHHHHHHHHhcCCCCCChHHHHHHHHHHHH
Q 018699          275 SPDGGLVYLPKLSFKRYW-KVELWKSLFTNLLNMSSGNDKEVLQNLQKSFQD  325 (351)
Q Consensus       275 ~~~~~~~~~~~~~~~~~~-~~~~~~~li~~~L~~dP~~R~s~~e~l~~~~~~  325 (351)
                      ......+......+|... + .++++||++||.+||.+|+++.+++.|+|-.
T Consensus       229 ~~l~~ki~~~~~~~p~~~~S-~~~~~Li~~mL~~~P~~R~t~~~i~~h~w~~  279 (370)
T KOG0583|consen  229 PNLYRKIRKGEFKIPSYLLS-PEARSLIEKMLVPDPSTRITLLEILEHPWFQ  279 (370)
T ss_pred             HHHHHHHhcCCccCCCCcCC-HHHHHHHHHHcCCCcccCCCHHHHhhChhhc
Confidence            433333555666677766 6 8999999999999999999999999988644

>KOG0616 consensus cAMP-dependent protein kinase catalytic subunit (PKA) [Signal transduction mechanisms]

Probab=100.00  E-value=2e-47  Score=319.97  Aligned_cols=253  Identities=18%  Similarity=0.210  Sum_probs=215.8

Q ss_pred             EcCeeEEEEEEeeccCceEEEEEEecCCCCceEEEEecCCCCChHHHHHHHH---HhhhccccccccccceeeecccCee
Q 018699           45 IGGKKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFPWEFYMYRQL---DQRISGRERSSFGFAHRIHLYSDYS  121 (351)
Q Consensus        45 i~~~~Y~i~~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~~~e~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~  121 (351)
                      ..-++|++.+.||.|+||.|.+++ ...+|.++|+|++.+...-........   .+.+....++.++....-+...+.+
T Consensus        41 ~~l~dfe~~~tlGtGSFGrV~LVr-~k~~g~yYAmKvL~k~~vVklKQveH~~nEk~vL~~v~~PFlv~l~~t~~d~~~l  119 (355)
T KOG0616|consen   41 YSLQDFERLKTLGTGSFGRVHLVR-EKHSGNYYAMKVLDKQKVVKLKQVEHTHNEKRVLKAVSHPFLVKLYGTFKDNSNL  119 (355)
T ss_pred             cchhhhhheeeeccCccceEEEEE-EccCCceeehhhcCHHHHHHHHHHHHHhhHHHHHhhccCceeEEEEEeeccCCeE
Confidence            445789999999999999999999 567799999999987643222222222   2233344556666666667778999


Q ss_pred             EEEEEecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeeccCCCCCc
Q 018699          122 ILVCDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSGPW  201 (351)
Q Consensus       122 ~lv~e~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~~~~~~  201 (351)
                      |+||||.+||.|..++.+    .+++++..++.++.||+.|+.|||+.+|++|||||+||++|                 
T Consensus       120 ymvmeyv~GGElFS~Lrk----~~rF~e~~arFYAAeivlAleylH~~~iiYRDLKPENiLlD-----------------  178 (355)
T KOG0616|consen  120 YMVMEYVPGGELFSYLRK----SGRFSEPHARFYAAEIVLALEYLHSLDIIYRDLKPENLLLD-----------------  178 (355)
T ss_pred             EEEEeccCCccHHHHHHh----cCCCCchhHHHHHHHHHHHHHHHHhcCeeeccCChHHeeec-----------------
Confidence            999999999999999998    47899999999999999999999999999999999999999                 


Q ss_pred             ccCCeEEeecCCccccccCCCCccccccccCCCcccceeccCCCCCccchHhHHHHHHHHHHhCccccccccCCCCCcee
Q 018699          202 QDQGLCLVDWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQEKKPWKFQVDTYGLCAIVHMMLHNSYMEIEKKASPDGGLV  281 (351)
Q Consensus       202 ~~~~~~l~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~p~~~~~~~~~~~~~  281 (351)
                      .+|-+||+|||+|....     ...-+.||||.|+|||++..++|+.++|+||||+++|||+.|.+||...++......+
T Consensus       179 ~~G~iKitDFGFAK~v~-----~rT~TlCGTPeYLAPEii~sk~ynkavDWWalGVLIYEMlaG~pPF~~~~~~~iY~KI  253 (355)
T KOG0616|consen  179 QNGHIKITDFGFAKRVS-----GRTWTLCGTPEYLAPEIIQSKGYNKAVDWWALGVLIYEMLAGYPPFYDDNPIQIYEKI  253 (355)
T ss_pred             cCCcEEEEeccceEEec-----CcEEEecCCccccChHHhhcCCCCcchhHHHHHHHHHHHHcCCCCCcCCChHHHHHHH
Confidence            88999999999997643     2256789999999999999999999999999999999999999999998887666777


Q ss_pred             eecCcchhhhhHHHHHHHHHHHHhcCCCCCCh-----HHHHHHHHHHHH
Q 018699          282 YLPKLSFKRYWKVELWKSLFTNLLNMSSGNDK-----EVLQNLQKSFQD  325 (351)
Q Consensus       282 ~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~-----s~~e~l~~~~~~  325 (351)
                      ......+|.+++ ..+++||+++|+.|-.+|.     ...++-.|+|..
T Consensus       254 ~~~~v~fP~~fs-~~~kdLl~~LL~vD~t~R~gnlknG~~dIk~H~wF~  301 (355)
T KOG0616|consen  254 LEGKVKFPSYFS-SDAKDLLKKLLQVDLTKRFGNLKNGVEDIKNHPWFK  301 (355)
T ss_pred             HhCcccCCcccC-HHHHHHHHHHHhhhhHhhhcCcCCCccccccCcccc
Confidence            788899999999 9999999999999999994     456788887643

>KOG0593 consensus Predicted protein kinase KKIAMRE [General function prediction only]

Probab=100.00  E-value=1.4e-46  Score=315.71  Aligned_cols=258  Identities=19%  Similarity=0.254  Sum_probs=204.1

Q ss_pred             eeEEEEEEeeccCceEEEEEEecCCCCceEEEEecCCCCChHH--HHHHHHHhhhccccccccccceeeecccCeeEEEE
Q 018699           48 KKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFPWEF--YMYRQLDQRISGRERSSFGFAHRIHLYSDYSILVC  125 (351)
Q Consensus        48 ~~Y~i~~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~~~e~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~  125 (351)
                      ++|+...++|.|+||+||+|+ +.++|+.||||++..+.....  .+-....+.+....|++++....++.-...+++|+
T Consensus         2 ekYE~LgkvGEGSYGvV~KCr-nk~TgqIVAIKkF~Esedd~~VkKIAlREIrmLKqLkH~NLVnLiEVFrrkrklhLVF   80 (396)
T KOG0593|consen    2 EKYEKLGKVGEGSYGVVMKCR-NKDTGQIVAIKKFVESEDDPVVKKIALREIRMLKQLKHENLVNLIEVFRRKRKLHLVF   80 (396)
T ss_pred             cHHhhhhccccCcceEEEEec-cCCcccEEEEEeeccCCccHHHHHHHHHHHHHHHhcccchHHHHHHHHHhcceeEEEe
Confidence            468999999999999999999 789999999999876543221  11111123455677889999999998899999999


Q ss_pred             EecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeeccCCCCCcccCC
Q 018699          126 DYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSGPWQDQG  205 (351)
Q Consensus       126 e~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~~~~~~~~~~  205 (351)
                      ||| .-++.+.+..+   ...++.+.+..+++|++.|+.|+|+++++||||||+||++.                 .++.
T Consensus        81 E~~-dhTvL~eLe~~---p~G~~~~~vk~~l~Q~l~ai~~cHk~n~IHRDIKPENILit-----------------~~gv  139 (396)
T KOG0593|consen   81 EYC-DHTVLHELERY---PNGVPSELVKKYLYQLLKAIHFCHKNNCIHRDIKPENILIT-----------------QNGV  139 (396)
T ss_pred             eec-chHHHHHHHhc---cCCCCHHHHHHHHHHHHHHhhhhhhcCeecccCChhheEEe-----------------cCCc
Confidence            999 55777777765   46789999999999999999999999999999999999999                 8899


Q ss_pred             eEEeecCCccccccCCCCccccccccCCCcccceeccC-CCCCccchHhHHHHHHHHHHhCccccccccCCCC-------
Q 018699          206 LCLVDWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQEK-KPWKFQVDTYGLCAIVHMMLHNSYMEIEKKASPD-------  277 (351)
Q Consensus       206 ~~l~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~~DiwslG~il~~l~~g~~p~~~~~~~~~-------  277 (351)
                      +||||||+|+..+.  ++..+...+.|.+|+|||++.| .+|+..+||||+||++.||++|.+.|...+..+.       
T Consensus       140 vKLCDFGFAR~L~~--pgd~YTDYVATRWYRaPELLvGDtqYG~pVDiWAiGCv~aEl~~G~pL~PG~SDiDQLy~I~kt  217 (396)
T KOG0593|consen  140 VKLCDFGFARTLSA--PGDNYTDYVATRWYRAPELLVGDTQYGKPVDIWAIGCVFAELLTGEPLWPGRSDIDQLYLIRKT  217 (396)
T ss_pred             EEeccchhhHhhcC--CcchhhhhhhhhhccChhhhcccCcCCCcccchhhhHHHHHHhcCCcCCCCcchHHHHHHHHHH
Confidence            99999999987553  4566788899999999999977 7899999999999999999999987765544311       


Q ss_pred             --------------Cce---eeecCc----chhhhhHH--HHHHHHHHHHhcCCCCCChHHHHHHHHHH-HHHHhh
Q 018699          278 --------------GGL---VYLPKL----SFKRYWKV--ELWKSLFTNLLNMSSGNDKEVLQNLQKSF-QDYLCS  329 (351)
Q Consensus       278 --------------~~~---~~~~~~----~~~~~~~~--~~~~~li~~~L~~dP~~R~s~~e~l~~~~-~~~~~~  329 (351)
                                    ..+   +..|.+    ++.+.++.  ..+.+|++.||..||++|++.+|+|.|++ +++.+.
T Consensus       218 LG~L~prhq~iF~~N~~F~Gv~lP~~~~~epLe~k~p~~s~~~ld~~k~cL~~dP~~R~sc~qll~H~yFd~~~er  293 (396)
T KOG0593|consen  218 LGNLIPRHQSIFSSNPFFHGVRLPEPEHPEPLERKYPKISNVLLDLLKKCLKMDPDDRLSCEQLLHHPYFDGFIER  293 (396)
T ss_pred             HcccCHHHHHHhccCCceeeeecCCCCCccchhhhcccchHHHHHHHHHHhcCCccccccHHHHhcChHHHHHHHH
Confidence                          000   011111    11111111  56889999999999999999999999985 445554

>KOG0661 consensus MAPK related serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=1.6e-47  Score=338.97  Aligned_cols=254  Identities=19%  Similarity=0.211  Sum_probs=206.9

Q ss_pred             EcCeeEEEEEEeeccCceEEEEEEecCCCCceEEEEecCCCCCh--HHHHHHHHHhhhccccccccccceeeecccC-ee
Q 018699           45 IGGKKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFPW--EFYMYRQLDQRISGRERSSFGFAHRIHLYSD-YS  121 (351)
Q Consensus        45 i~~~~Y~i~~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~~~--e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~  121 (351)
                      +.-+||.+.++||.|+||.||+|+ ...+|+.||||.+++.+..  |.-.++++........|++++.+..+..+.+ .+
T Consensus         7 ~~m~RY~~i~klGDGTfGsV~la~-~~~~~~~VAIK~MK~Kf~s~ee~~nLREvksL~kln~hpniikL~Evi~d~~~~L   85 (538)
T KOG0661|consen    7 IFMDRYTVIRKLGDGTFGSVYLAK-SKETGELVAIKKMKKKFYSWEECMNLREVKSLRKLNPHPNIIKLKEVIRDNDRIL   85 (538)
T ss_pred             hHHHHHHHHHHhcCCcceeEEEee-ecCCCceeeHHHHHhhhccHHHHHHHHHHHHHHhcCCCCcchhhHHHhhccCceE
Confidence            345799999999999999999999 6888999999998866432  3344555554444444899999998887766 99


Q ss_pred             EEEEEecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeeccCCCCCc
Q 018699          122 ILVCDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSGPW  201 (351)
Q Consensus       122 ~lv~e~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~~~~~~  201 (351)
                      |+||||| ..+|++++..+   ++.|++..++.|+.||+.||+|+|.+|+.|||+||+|||+.                 
T Consensus        86 ~fVfE~M-d~NLYqLmK~R---~r~fse~~irnim~QilqGL~hiHk~GfFHRDlKPENiLi~-----------------  144 (538)
T KOG0661|consen   86 YFVFEFM-DCNLYQLMKDR---NRLFSESDIRNIMYQILQGLAHIHKHGFFHRDLKPENILIS-----------------  144 (538)
T ss_pred             eeeHHhh-hhhHHHHHhhc---CCcCCHHHHHHHHHHHHHHHHHHHhcCcccccCChhheEec-----------------
Confidence            9999999 78999999987   68999999999999999999999999999999999999999                 


Q ss_pred             ccCCeEEeecCCccccccCCCCccccccccCCCcccceeccC-CCCCccchHhHHHHHHHHHHhCccccccccCCCC---
Q 018699          202 QDQGLCLVDWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQEK-KPWKFQVDTYGLCAIVHMMLHNSYMEIEKKASPD---  277 (351)
Q Consensus       202 ~~~~~~l~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~~DiwslG~il~~l~~g~~p~~~~~~~~~---  277 (351)
                      ....+||+|||+|+.+...+   .+...+.|++|+|||++.. .-|+.+.|+||+|||++|+.+-++.|.+.++.+.   
T Consensus       145 ~~~~iKiaDFGLARev~Skp---PYTeYVSTRWYRAPEvLLrs~~Ys~pvD~wA~GcI~aEl~sLrPLFPG~sE~Dqi~K  221 (538)
T KOG0661|consen  145 GNDVIKIADFGLAREVRSKP---PYTEYVSTRWYRAPEVLLRSGYYSSPVDMWAVGCIMAELYSLRPLFPGASEIDQIYK  221 (538)
T ss_pred             ccceeEecccccccccccCC---CcchhhhcccccchHHhhhccccCCchHHHHHHHHHHHHHHhcccCCCCcHHHHHHH
Confidence            56679999999998866443   3566678999999999855 6688999999999999999999988865544311   


Q ss_pred             ------------------------CceeeecCcchhhh---hHHHHHHHHHHHHhcCCCCCChHHHHHHHHHHH
Q 018699          278 ------------------------GGLVYLPKLSFKRY---WKVELWKSLFTNLLNMSSGNDKEVLQNLQKSFQ  324 (351)
Q Consensus       278 ------------------------~~~~~~~~~~~~~~---~~~~~~~~li~~~L~~dP~~R~s~~e~l~~~~~  324 (351)
                                              ..+.......+...   ++ .++.++|.+||.+||++||||.|+|+|||.
T Consensus       222 Ic~VLGtP~~~~~~eg~~La~~mnf~~P~~~~~~l~~L~p~~s-~~~~~li~~ll~WDP~kRpTA~~al~~pff  294 (538)
T KOG0661|consen  222 ICEVLGTPDKDSWPEGYNLASAMNFRFPQVKPSPLKDLLPNAS-SEAASLIERLLAWDPDKRPTASQALQHPFF  294 (538)
T ss_pred             HHHHhCCCccccchhHHHHHHHhccCCCcCCCCChHHhCcccC-HHHHHHHHHHhcCCCccCccHHHHhcCccc
Confidence                                    11111122222221   34 888999999999999999999999999973

>KOG0578 consensus p21-activated serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=1.4e-46  Score=340.09  Aligned_cols=266  Identities=20%  Similarity=0.178  Sum_probs=221.5

Q ss_pred             eeEEEEEEeeccCceEEEEEEecCCCCceEEEEecCCCCChHHHHHHHHHhhhccccccccccceeeecccCeeEEEEEe
Q 018699           48 KKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFPWEFYMYRQLDQRISGRERSSFGFAHRIHLYSDYSILVCDY  127 (351)
Q Consensus        48 ~~Y~i~~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~  127 (351)
                      ..|....+||+|+.|.||.|+ +..+++.||||.+........+.+-..........|++++....-+..++.+|+||||
T Consensus       273 ~~y~~~~kigqgaSG~vy~A~-~~~~~~~VaiK~m~l~~Q~~keLilnEi~Vm~~~~H~NiVnfl~Sylv~deLWVVMEy  351 (550)
T KOG0578|consen  273 SKYTDFKKIGQGATGGVYVAR-KISTKQEVAIKRMDLRKQPKKELLLNEILVMRDLHHPNIVNFLDSYLVGDELWVVMEY  351 (550)
T ss_pred             hhhcchhhhccccccceeeee-eccCCceEEEEEEEeccCCchhhhHHHHHHHHhccchHHHHHHHHhcccceeEEEEee
Confidence            689999999999999999999 6788899999998755433333333333444556677888887777778999999999


Q ss_pred             cCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeeccCCCCCcccCCeE
Q 018699          128 LSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSGPWQDQGLC  207 (351)
Q Consensus       128 ~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~~~~~~~~~~~~  207 (351)
                      ++||+|.+.+..     ..+++.++..|+.+++.||+|||.+||+|||||.+||+++                 .+|.+|
T Consensus       352 m~ggsLTDvVt~-----~~~~E~qIA~Icre~l~aL~fLH~~gIiHrDIKSDnILL~-----------------~~g~vK  409 (550)
T KOG0578|consen  352 MEGGSLTDVVTK-----TRMTEGQIAAICREILQGLKFLHARGIIHRDIKSDNILLT-----------------MDGSVK  409 (550)
T ss_pred             cCCCchhhhhhc-----ccccHHHHHHHHHHHHHHHHHHHhcceeeeccccceeEec-----------------cCCcEE
Confidence            999999999886     4699999999999999999999999999999999999999                 788899


Q ss_pred             EeecCCccccccCCCCccccccccCCCcccceeccCCCCCccchHhHHHHHHHHHHhCccccccccCCCCCceee---ec
Q 018699          208 LVDWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQEKKPWKFQVDTYGLCAIVHMMLHNSYMEIEKKASPDGGLVY---LP  284 (351)
Q Consensus       208 l~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~p~~~~~~~~~~~~~~---~~  284 (351)
                      |+|||++..+.  .......+.+|||+|||||+...+.|++++||||||+++.||+-|.+||..+++......+.   .+
T Consensus       410 ltDFGFcaqi~--~~~~KR~TmVGTPYWMAPEVvtrk~YG~KVDIWSLGIMaIEMveGEPPYlnE~PlrAlyLIa~ng~P  487 (550)
T KOG0578|consen  410 LTDFGFCAQIS--EEQSKRSTMVGTPYWMAPEVVTRKPYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLIATNGTP  487 (550)
T ss_pred             Eeeeeeeeccc--cccCccccccCCCCccchhhhhhcccCccccchhhhhHHHHHhcCCCCccCCChHHHHHHHhhcCCC
Confidence            99999986543  33446778899999999999999999999999999999999999999999877653222111   35


Q ss_pred             CcchhhhhHHHHHHHHHHHHhcCCCCCChHHHHHHHHHHHHHHhhChHHHHHHHH
Q 018699          285 KLSFKRYWKVELWKSLFTNLLNMSSGNDKEVLQNLQKSFQDYLCSNPQLLKNLKE  339 (351)
Q Consensus       285 ~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~~~~~~~~~~~~~~~~~~~~  339 (351)
                      ....++..+ ..+++|+.+||+.||.+|+++.++|.|||....+....+...+.+
T Consensus       488 ~lk~~~klS-~~~kdFL~~cL~~dv~~RasA~eLL~HpFl~~a~p~ssL~pLi~~  541 (550)
T KOG0578|consen  488 KLKNPEKLS-PELKDFLDRCLVVDVEQRASAKELLEHPFLKMAKPESSLNPLILA  541 (550)
T ss_pred             CcCCccccC-HHHHHHHHHHhhcchhcCCCHHHHhcChhhhhcCCHHHhHHHHHH
Confidence            556666677 999999999999999999999999999998666665555554433

>KOG0591 consensus NIMA (never in mitosis)-related G2-specific serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=100.00  E-value=9.7e-48  Score=319.73  Aligned_cols=251  Identities=15%  Similarity=0.101  Sum_probs=199.6

Q ss_pred             eeEEEEEEeeccCceEEEEEEecCCCCceEEEEecCCCCChHHHHHHHHH--hhhcccccccccccee-ee-cccCeeEE
Q 018699           48 KKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFPWEFYMYRQLD--QRISGRERSSFGFAHR-IH-LYSDYSIL  123 (351)
Q Consensus        48 ~~Y~i~~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~~~e~~~~~~~~--~~~~~~~~~~~~~~~~-~~-~~~~~~~l  123 (351)
                      ..|+|.++||+|+||+||++. ...+|..||.|.+.-+...+.....-+.  ..+..+.|+|++.... .+ ....-+++
T Consensus        19 ~~y~Il~~IG~GsFg~vykv~-~~~~g~l~a~K~i~f~~md~k~rq~~v~Ei~lLkQL~HpNIVqYy~~~f~~~~evlni   97 (375)
T KOG0591|consen   19 ADYQILKKIGRGSFGEVYKVQ-CLLDGKLVALKKIQFGMMDAKARQDCVKEISLLKQLNHPNIVQYYAHSFIEDNEVLNI   97 (375)
T ss_pred             HHHHHHHHHcCCcchheEEee-eccCcchhhhhhcchhhccHHHHHHHHHHHHHHHhcCCchHHHHHHHhhhccchhhHH
Confidence            579999999999999999999 5788999999998754443333322222  2345566777766544 23 33344899


Q ss_pred             EEEecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHH--CC--ceecCCCCCcEEEeecCCcceeeccCCCC
Q 018699          124 VCDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHD--VG--IIHGDFKPDNLLIRYARDELTVLDHDRSG  199 (351)
Q Consensus       124 v~e~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~--~~--i~H~dl~p~Nill~~~~~~~~~~~~~~~~  199 (351)
                      |||+|.+|+|..+++.++.+++.+++.++|.++.|++.||..+|+  ..  |+||||||.||+++               
T Consensus        98 vmE~c~~GDLsqmIk~~K~qkr~ipE~~Vwk~f~QL~~AL~~cH~~~~r~~VmHRDIKPaNIFl~---------------  162 (375)
T KOG0591|consen   98 VMELCDAGDLSQMIKHFKKQKRLIPEKTVWKYFVQLCRALYHCHSKIPRGTVMHRDIKPANIFLT---------------  162 (375)
T ss_pred             HHHhhcccCHHHHHHHHHhccccCchHHHHHHHHHHHHHHHHHhccccccceeeccCcchheEEc---------------
Confidence            999999999999999999888999999999999999999999999  44  99999999999999               


Q ss_pred             CcccCCeEEeecCCccccccCCCCccccccccCCCcccceeccCCCCCccchHhHHHHHHHHHHhCccccccccCCCCCc
Q 018699          200 PWQDQGLCLVDWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQEKKPWKFQVDTYGLCAIVHMMLHNSYMEIEKKASPDGG  279 (351)
Q Consensus       200 ~~~~~~~~l~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~p~~~~~~~~~~~  279 (351)
                        .+|.+||+|||+++..+  .......+.+|||.||+||.+.+.+|++++||||+||++|||+.-++||...+-.....
T Consensus       163 --~~gvvKLGDfGL~r~l~--s~~tfA~S~VGTPyYMSPE~i~~~~Y~~kSDiWslGCllyEMcaL~~PF~g~n~~~L~~  238 (375)
T KOG0591|consen  163 --ANGVVKLGDFGLGRFLS--SKTTFAHSLVGTPYYMSPERIHESGYNFKSDIWSLGCLLYEMCALQSPFYGDNLLSLCK  238 (375)
T ss_pred             --CCCceeeccchhHhHhc--chhHHHHhhcCCCcccCHHHHhcCCCCcchhHHHHHHHHHHHHhcCCCcccccHHHHHH
Confidence              88999999999997543  22344567899999999999999999999999999999999999999998764221111


Q ss_pred             eee-ecCcchhhhhHHHHHHHHHHHHhcCCCCCChHHHHH
Q 018699          280 LVY-LPKLSFKRYWKVELWKSLFTNLLNMSSGNDKEVLQN  318 (351)
Q Consensus       280 ~~~-~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~  318 (351)
                      .+. ...+++|....+..+..||..|+++||+.||++..+
T Consensus       239 KI~qgd~~~~p~~~YS~~l~~li~~ci~vd~~~RP~t~~~  278 (375)
T KOG0591|consen  239 KIEQGDYPPLPDEHYSTDLRELINMCIAVDPEQRPDTVPY  278 (375)
T ss_pred             HHHcCCCCCCcHHHhhhHHHHHHHHHccCCcccCCCcchH
Confidence            122 233346633333999999999999999999974333

>KOG0588 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=100.00  E-value=2.2e-46  Score=343.35  Aligned_cols=253  Identities=16%  Similarity=0.168  Sum_probs=212.6

Q ss_pred             eeEEEEEEeeccCceEEEEEEecCCCCceEEEEecCCCCChH----HHHHHHHHhhhccccccccccceeeecccCeeEE
Q 018699           48 KKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFPWE----FYMYRQLDQRISGRERSSFGFAHRIHLYSDYSIL  123 (351)
Q Consensus        48 ~~Y~i~~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~~~e----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  123 (351)
                      +-|++++.||.|+.|.|-+|+ +..+|+.+|||++.+.....    ..+.+++. ....+.|+++....+++....++|+
T Consensus        12 GpwkLgkTLG~Gstg~vrlak-h~~TGqlaaiKii~k~~~~s~s~~~~IerEIv-iMkLi~HpnVl~LydVwe~~~~lyl   89 (786)
T KOG0588|consen   12 GPWKLGKTLGKGSTGCVRLAK-HAETGQLAAIKIIPKRSELSSSQPAGIEREIV-IMKLIEHPNVLRLYDVWENKQHLYL   89 (786)
T ss_pred             cceeccccccCCCCceehhhh-cccccceeEEEeeccccccccccccchhhhhH-HHHHhcCCCeeeeeeeeccCceEEE
Confidence            469999999999999999999 68999999999988652211    11111111 1234467888889999999999999


Q ss_pred             EEEecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeeccCCCCCccc
Q 018699          124 VCDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSGPWQD  203 (351)
Q Consensus       124 v~e~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~~~~~~~~  203 (351)
                      |+||++||.|.+++-.    .+++++.++..++.||+.|+.|+|..+|+|||+||+|++++                 ..
T Consensus        90 vlEyv~gGELFdylv~----kG~l~e~eaa~ff~QIi~gv~yCH~~~icHRDLKpENlLLd-----------------~~  148 (786)
T KOG0588|consen   90 VLEYVPGGELFDYLVR----KGPLPEREAAHFFRQILDGVSYCHAFNICHRDLKPENLLLD-----------------VK  148 (786)
T ss_pred             EEEecCCchhHHHHHh----hCCCCCHHHHHHHHHHHHHHHHHhhhcceeccCCchhhhhh-----------------cc
Confidence            9999999999999988    57999999999999999999999999999999999999999                 66


Q ss_pred             CCeEEeecCCccccccCCCCccccccccCCCcccceeccCCCCC-ccchHhHHHHHHHHHHhCccccccccCCCCCceee
Q 018699          204 QGLCLVDWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQEKKPWK-FQVDTYGLCAIVHMMLHNSYMEIEKKASPDGGLVY  282 (351)
Q Consensus       204 ~~~~l~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~-~~~DiwslG~il~~l~~g~~p~~~~~~~~~~~~~~  282 (351)
                      +++||+|||+|.   ...++.-..+.||+|.|.|||++.|.+|. .++||||.|||||.|++|+.||...+...-...+.
T Consensus       149 ~nIKIADFGMAs---Le~~gklLeTSCGSPHYA~PEIV~G~pYdG~~sDVWSCGVILfALLtG~LPFdDdNir~LLlKV~  225 (786)
T KOG0588|consen  149 NNIKIADFGMAS---LEVPGKLLETSCGSPHYAAPEIVSGRPYDGRPSDVWSCGVILFALLTGKLPFDDDNIRVLLLKVQ  225 (786)
T ss_pred             cCEeeeccceee---cccCCccccccCCCcccCCchhhcCCCCCCCccccchhHHHHHHHHhCCCCCCCccHHHHHHHHH
Confidence            669999999994   34567778899999999999999999997 99999999999999999999999766542222233


Q ss_pred             ecCcchhhhhHHHHHHHHHHHHhcCCCCCChHHHHHHHHHHHHHH
Q 018699          283 LPKLSFKRYWKVELWKSLFTNLLNMSSGNDKEVLQNLQKSFQDYL  327 (351)
Q Consensus       283 ~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~~~~~~~~  327 (351)
                      .....+|...+ .++++||++||..||.+|+|.+|++.|||-...
T Consensus       226 ~G~f~MPs~Is-~eaQdLLr~ml~VDp~~RiT~~eI~kHP~l~g~  269 (786)
T KOG0588|consen  226 RGVFEMPSNIS-SEAQDLLRRMLDVDPSTRITTEEILKHPFLSGY  269 (786)
T ss_pred             cCcccCCCcCC-HHHHHHHHHHhccCccccccHHHHhhCchhhcC
Confidence            44445555556 899999999999999999999999999985543

>KOG0198 consensus MEKK and related serine/threonine protein kinases [Signal transduction mechanisms]

Probab=100.00  E-value=8.6e-46  Score=324.73  Aligned_cols=258  Identities=19%  Similarity=0.151  Sum_probs=199.6

Q ss_pred             CeeEEEEEEeeccCceEEEEEEecCCCCceEEEEecCCCCChHHHHHHHHHhhhccccccccccceeeecccC--eeEEE
Q 018699           47 GKKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFPWEFYMYRQLDQRISGRERSSFGFAHRIHLYSD--YSILV  124 (351)
Q Consensus        47 ~~~Y~i~~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~lv  124 (351)
                      ..+|...+.||+|+||+||++. +.++|+..|||.+........+.+......+....+++++..........  .++++
T Consensus        16 ~~~~~~~~~lG~Gs~G~V~l~~-~~~~g~~~AvK~v~~~~~~~~~~l~~Ei~iL~~l~~p~IV~~~G~~~~~~~~~~~i~   94 (313)
T KOG0198|consen   16 ISNWSKGKLLGRGSFGSVYLAT-NKKTGELMAVKSVELEDSPTSESLEREIRILSRLNHPNIVQYYGSSSSRENDEYNIF   94 (313)
T ss_pred             cchhhhhccccCccceEEEEEE-ecCCCcceeeeeeecccchhHHHHHHHHHHHHhCCCCCEEeeCCccccccCeeeEee
Confidence            4579999999999999999999 56668999999987653223222333333333444777777766533333  68999


Q ss_pred             EEecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeeccCCCCCcc-c
Q 018699          125 CDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSGPWQ-D  203 (351)
Q Consensus       125 ~e~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~~~~~~~-~  203 (351)
                      |||+++|+|.+++.+.   +..+++..++.+..||++||+|||++||+|+||||+||+++                 . +
T Consensus        95 mEy~~~GsL~~~~~~~---g~~l~E~~v~~ytr~iL~GL~ylHs~g~vH~DiK~~NiLl~-----------------~~~  154 (313)
T KOG0198|consen   95 MEYAPGGSLSDLIKRY---GGKLPEPLVRRYTRQILEGLAYLHSKGIVHCDIKPANILLD-----------------PSN  154 (313)
T ss_pred             eeccCCCcHHHHHHHc---CCCCCHHHHHHHHHHHHHHHHHHHhCCEeccCcccceEEEe-----------------CCC
Confidence            9999999999999986   33899999999999999999999999999999999999999                 5 5


Q ss_pred             CCeEEeecCCccccccC-CCCccccccccCCCcccceeccCC-CCCccchHhHHHHHHHHHHhCccccccc-cCCCCCce
Q 018699          204 QGLCLVDWGRGIDLHLF-PDNMEFEGDCRTSGFRCIEMQEKK-PWKFQVDTYGLCAIVHMMLHNSYMEIEK-KASPDGGL  280 (351)
Q Consensus       204 ~~~~l~Dfg~a~~~~~~-~~~~~~~~~~g~~~y~aPE~~~~~-~~~~~~DiwslG~il~~l~~g~~p~~~~-~~~~~~~~  280 (351)
                      +.+||+|||++...... ..........||+.|||||++... ...+++|||||||++.||+||..||... ......-.
T Consensus       155 ~~~KlaDFG~a~~~~~~~~~~~~~~~~~Gtp~~maPEvi~~g~~~~~~sDiWSlGCtVvEM~Tg~~PW~~~~~~~~~~~~  234 (313)
T KOG0198|consen  155 GDVKLADFGLAKKLESKGTKSDSELSVQGTPNYMAPEVIRNGEVARRESDIWSLGCTVVEMLTGKPPWSEFFEEAEALLL  234 (313)
T ss_pred             CeEEeccCccccccccccccccccccccCCccccCchhhcCCCcCCccchhhhcCCEEEeccCCCCcchhhcchHHHHHH
Confidence            78999999998764431 112234456899999999999853 3336999999999999999999998863 11100000


Q ss_pred             --eeecCcchhhhhHHHHHHHHHHHHhcCCCCCChHHHHHHHHHHHHH
Q 018699          281 --VYLPKLSFKRYWKVELWKSLFTNLLNMSSGNDKEVLQNLQKSFQDY  326 (351)
Q Consensus       281 --~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~~~~~~~  326 (351)
                        .....+.+|...+ +.+++||.+|+..||++|||+.++|.|||...
T Consensus       235 ig~~~~~P~ip~~ls-~~a~~Fl~~C~~~~p~~Rpta~eLL~hpf~~~  281 (313)
T KOG0198|consen  235 IGREDSLPEIPDSLS-DEAKDFLRKCFKRDPEKRPTAEELLEHPFLKQ  281 (313)
T ss_pred             HhccCCCCCCCcccC-HHHHHHHHHHhhcCcccCcCHHHHhhChhhhc
Confidence              0112236677667 89999999999999999999999999998654

>KOG0597 consensus Serine-threonine protein kinase FUSED [General function prediction only]

Probab=100.00  E-value=4.7e-46  Score=335.36  Aligned_cols=252  Identities=17%  Similarity=0.173  Sum_probs=215.0

Q ss_pred             eeEEEEEEeeccCceEEEEEEecCCCCceEEEEecCCCCChHH--HHHHHHHhhhccccccccccceeeecccCeeEEEE
Q 018699           48 KKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFPWEF--YMYRQLDQRISGRERSSFGFAHRIHLYSDYSILVC  125 (351)
Q Consensus        48 ~~Y~i~~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~~~e~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~  125 (351)
                      ++|-+.+.||+|+||+||+|+ ++.+.+.||||.+.+.-..+.  .-+++.-+......|++++.++..+.....+|+|+
T Consensus         2 e~yhv~e~iG~Gsfg~VYKgr-rK~t~~~vAik~i~K~gr~~k~l~~l~~ev~i~r~lkHpniv~m~esfEt~~~~~vVt   80 (808)
T KOG0597|consen    2 EQYHVYEMIGEGSFGRVYKGR-RKYTIQVVAIKFIDKSGRNEKELKNLRQEVRILRSLKHPNIVEMLESFETSAHLWVVT   80 (808)
T ss_pred             cchhHHHHhcCCccceeeecc-cccceeEEEEEEehhcCCchHHHHHHHHHHHHHHhcCCcchhhHHHhhcccceEEEEe
Confidence            478899999999999999999 788999999999987655543  22333344456678899999999999999999999


Q ss_pred             EecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeeccCCCCCcccCC
Q 018699          126 DYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSGPWQDQG  205 (351)
Q Consensus       126 e~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~~~~~~~~~~  205 (351)
                      ||+.| +|..++..    ++.++++.+..++.+++.||.|||+++|+|+|+||.||+++                 ..+.
T Consensus        81 e~a~g-~L~~il~~----d~~lpEe~v~~~a~~LVsaL~yLhs~rilhrd~kPqniLl~-----------------~~~~  138 (808)
T KOG0597|consen   81 EYAVG-DLFTILEQ----DGKLPEEQVRAIAYDLVSALYYLHSNRILHRDMKPQNILLE-----------------KGGT  138 (808)
T ss_pred             hhhhh-hHHHHHHh----ccCCCHHHHHHHHHHHHHHHHHHHhcCcccccCCcceeeec-----------------CCCc
Confidence            99965 99999988    78999999999999999999999999999999999999999                 8899


Q ss_pred             eEEeecCCccccccCCCCccccccccCCCcccceeccCCCCCccchHhHHHHHHHHHHhCccccccccCCCCCceeeecC
Q 018699          206 LCLVDWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQEKKPWKFQVDTYGLCAIVHMMLHNSYMEIEKKASPDGGLVYLPK  285 (351)
Q Consensus       206 ~~l~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~p~~~~~~~~~~~~~~~~~  285 (351)
                      +|+||||+|+.++.  +.......-|||.|||||+..+.+|+..+|+||||||+||+++|++||.......--..+...+
T Consensus       139 ~KlcdFg~Ar~m~~--~t~vltsikGtPlYmAPElv~e~pyd~~sDlWslGcilYE~~~G~PPF~a~si~~Lv~~I~~d~  216 (808)
T KOG0597|consen  139 LKLCDFGLARAMST--NTSVLTSIKGTPLYMAPELVEEQPYDHTSDLWSLGCILYELYVGQPPFYARSITQLVKSILKDP  216 (808)
T ss_pred             eeechhhhhhhccc--CceeeeeccCcccccCHHHHcCCCccchhhHHHHHHHHHHHhcCCCCchHHHHHHHHHHHhcCC
Confidence            99999999986542  3334556679999999999999999999999999999999999999998766542223333444


Q ss_pred             cchhhhhHHHHHHHHHHHHhcCCCCCChHHHHHHHHHHHH
Q 018699          286 LSFKRYWKVELWKSLFTNLLNMSSGNDKEVLQNLQKSFQD  325 (351)
Q Consensus       286 ~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~~~~~~  325 (351)
                      ...|...+ ..+.+|+..+|.+||..|++..+++.|||-.
T Consensus       217 v~~p~~~S-~~f~nfl~gLL~kdP~~RltW~~Ll~HpF~k  255 (808)
T KOG0597|consen  217 VKPPSTAS-SSFVNFLQGLLIKDPAQRLTWTDLLGHPFWK  255 (808)
T ss_pred             CCCccccc-HHHHHHHHHHhhcChhhcccHHHHhcChHHh
Confidence            44455555 8899999999999999999999999999843

>KOG0694 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=1.8e-45  Score=339.27  Aligned_cols=256  Identities=18%  Similarity=0.208  Sum_probs=214.8

Q ss_pred             EEcCeeEEEEEEeeccCceEEEEEEecCCCCceEEEEecCCCCCh---HHHHHHHHHhhhc-cccccccccceeeecccC
Q 018699           44 EIGGKKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFPW---EFYMYRQLDQRIS-GRERSSFGFAHRIHLYSD  119 (351)
Q Consensus        44 ~i~~~~Y~i~~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~~~---e~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~  119 (351)
                      .++-++|.+.++||+|+||.|++|. ...+++++|||+++++..-   +++......+... ...||.+...+..++..+
T Consensus       364 ~~~l~~F~~l~vLGkGsFGkV~lae-~k~~~e~yAIK~LKK~~Il~~d~Ve~~~~EkrI~~la~~HPFL~~L~~~fQT~~  442 (694)
T KOG0694|consen  364 PLTLDDFRLLAVLGRGSFGKVLLAE-LKGTNEYYAIKVLKKGDILQRDEVESLMCEKRIFELANRHPFLVNLFSCFQTKE  442 (694)
T ss_pred             cccccceEEEEEeccCcCceEEEEE-EcCCCcEEEEEEeeccceeccccHHHHHHHHHHHHHhccCCeEeecccccccCC
Confidence            4566899999999999999999999 5678899999999886432   2333222222111 126888888899999999


Q ss_pred             eeEEEEEecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeeccCCCC
Q 018699          120 YSILVCDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSG  199 (351)
Q Consensus       120 ~~~lv~e~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~~~~  199 (351)
                      ++|+||||+.||++..+++.     ..|++..++.++.+|+.||.|||++||||||||.+||++|               
T Consensus       443 ~l~fvmey~~Ggdm~~~~~~-----~~F~e~rarfyaAev~l~L~fLH~~~IIYRDlKLdNiLLD---------------  502 (694)
T KOG0694|consen  443 HLFFVMEYVAGGDLMHHIHT-----DVFSEPRARFYAAEVVLGLQFLHENGIIYRDLKLDNLLLD---------------  502 (694)
T ss_pred             eEEEEEEecCCCcEEEEEec-----ccccHHHHHHHHHHHHHHHHHHHhcCceeeecchhheEEc---------------
Confidence            99999999999995554443     6899999999999999999999999999999999999999               


Q ss_pred             CcccCCeEEeecCCccccccCCCCccccccccCCCcccceeccCCCCCccchHhHHHHHHHHHHhCccccccccCCCCCc
Q 018699          200 PWQDQGLCLVDWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQEKKPWKFQVDTYGLCAIVHMMLHNSYMEIEKKASPDGG  279 (351)
Q Consensus       200 ~~~~~~~~l~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~p~~~~~~~~~~~  279 (351)
                        .+|.+||+|||++...  ...+....+.||||.|+|||++.+..|+.++|+|||||++|+|+.|..||...++.+.-.
T Consensus       503 --~eGh~kiADFGlcKe~--m~~g~~TsTfCGTpey~aPEil~e~~Yt~aVDWW~lGVLlyeML~Gq~PF~gddEee~Fd  578 (694)
T KOG0694|consen  503 --TEGHVKIADFGLCKEG--MGQGDRTSTFCGTPEFLAPEVLTEQSYTRAVDWWGLGVLLYEMLVGESPFPGDDEEEVFD  578 (694)
T ss_pred             --ccCcEEeccccccccc--CCCCCccccccCChhhcChhhhccCcccchhhHHHHHHHHHHHHcCCCCCCCCCHHHHHH
Confidence              8899999999999752  234557788999999999999999999999999999999999999999999877765555


Q ss_pred             eeeecCcchhhhhHHHHHHHHHHHHhcCCCCCChHH-----HHHHHHHHHH
Q 018699          280 LVYLPKLSFKRYWKVELWKSLFTNLLNMSSGNDKEV-----LQNLQKSFQD  325 (351)
Q Consensus       280 ~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~-----~e~l~~~~~~  325 (351)
                      -+....+.+|...+ .++.++|+++|.++|++|.-+     .++..|||..
T Consensus       579 sI~~d~~~yP~~ls-~ea~~il~~ll~k~p~kRLG~~e~d~~~i~~hpFFr  628 (694)
T KOG0694|consen  579 SIVNDEVRYPRFLS-KEAIAIMRRLLRKNPEKRLGSGERDAEDIKKHPFFR  628 (694)
T ss_pred             HHhcCCCCCCCccc-HHHHHHHHHHhccCcccccCCCCCCchhhhhCCccc
Confidence            56677888888888 899999999999999999865     5555688743

>KOG0660 consensus Mitogen-activated protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=5.9e-45  Score=313.63  Aligned_cols=257  Identities=20%  Similarity=0.242  Sum_probs=204.9

Q ss_pred             cCeeEEEEEEeeccCceEEEEEEecCCCCceEEEEecCCCCChHHHHHHHHHh--hhccccccccccceeeecc-----c
Q 018699           46 GGKKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFPWEFYMYRQLDQ--RISGRERSSFGFAHRIHLY-----S  118 (351)
Q Consensus        46 ~~~~Y~i~~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~~~e~~~~~~~~~--~~~~~~~~~~~~~~~~~~~-----~  118 (351)
                      ...+|...+.||.|+||.|+.|. +..+|+.||||++...+.......+.+++  -+....|.++..+.++...     -
T Consensus        20 i~~~y~~~~~iG~GAyGvVcsA~-~~~t~~~VAIKKi~~~F~~~~~akRtlRElklLr~~~HeNIi~l~di~~p~~~~~f   98 (359)
T KOG0660|consen   20 IPRYYVLIEPIGRGAYGVVCSAK-DKRTGEKVAIKKILNPFENQIDAKRTLRELKLLRHLRHENIIGLLDIFRPPSRDKF   98 (359)
T ss_pred             ccceecccccccCcceeeEEEEE-EcCCCCEeehhhhhhhhhchHHHHHHHHHHHHHHHhcCCCcceEEeeccccccccc
Confidence            35777778999999999999999 67888999999998776665444443332  2233457788777777654     3


Q ss_pred             CeeEEEEEecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeeccCCC
Q 018699          119 DYSILVCDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRS  198 (351)
Q Consensus       119 ~~~~lv~e~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~~~  198 (351)
                      +.+|+|+|++ +.+|...+..    +..+++..+..+++|++.|++|+|+.+|+||||||.|++++              
T Consensus        99 ~DvYiV~elM-etDL~~iik~----~~~L~d~H~q~f~YQiLrgLKyiHSAnViHRDLKPsNll~n--------------  159 (359)
T KOG0660|consen   99 NDVYLVFELM-ETDLHQIIKS----QQDLTDDHAQYFLYQILRGLKYIHSANVIHRDLKPSNLLLN--------------  159 (359)
T ss_pred             ceeEEehhHH-hhHHHHHHHc----CccccHHHHHHHHHHHHHhcchhhcccccccccchhheeec--------------
Confidence            5679999999 7799999988    56799999999999999999999999999999999999999              


Q ss_pred             CCcccCCeEEeecCCccccccCCCCccccccccCCCcccceecc-CCCCCccchHhHHHHHHHHHHhCccccccccCCCC
Q 018699          199 GPWQDQGLCLVDWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQE-KKPWKFQVDTYGLCAIVHMMLHNSYMEIEKKASPD  277 (351)
Q Consensus       199 ~~~~~~~~~l~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~-~~~~~~~~DiwslG~il~~l~~g~~p~~~~~~~~~  277 (351)
                         .+..+||+|||+|+.....+........+.|.+|+|||++. ...|+.+.||||+|||+.||++|++.|.+.+....
T Consensus       160 ---~~c~lKI~DFGLAR~~~~~~~~~~mTeYVaTRWYRAPElll~~~~Yt~aiDiWSvGCI~AEmL~gkplFpG~d~v~Q  236 (359)
T KOG0660|consen  160 ---ADCDLKICDFGLARYLDKFFEDGFMTEYVATRWYRAPELLLNSSEYTKAIDIWSVGCILAEMLTGKPLFPGKDYVHQ  236 (359)
T ss_pred             ---cCCCEEeccccceeeccccCcccchhcceeeeeecCHHHHhccccccchhhhhhhhHHHHHHHcCCCCCCCCchHHH
Confidence               77889999999998765543344457778899999999984 47899999999999999999999988865443211


Q ss_pred             ----------------------------CceeeecCcchhhhhHH--HHHHHHHHHHhcCCCCCChHHHHHHHHHHHH
Q 018699          278 ----------------------------GGLVYLPKLSFKRYWKV--ELWKSLFTNLLNMSSGNDKEVLQNLQKSFQD  325 (351)
Q Consensus       278 ----------------------------~~~~~~~~~~~~~~~~~--~~~~~li~~~L~~dP~~R~s~~e~l~~~~~~  325 (351)
                                                  .+....++.++...+..  +.+.+|+.+||..||.+|+|++|+|+||+-+
T Consensus       237 l~lI~~~lGtP~~e~l~~i~s~~ar~yi~slp~~p~~~f~~~fp~a~p~AidLlekmL~fdP~kRita~eAL~hPYl~  314 (359)
T KOG0660|consen  237 LQLILELLGTPSEEDLQKIRSEKARPYIKSLPQIPKQPFSSIFPNANPLAIDLLEKMLVFDPKKRITAEEALAHPYLA  314 (359)
T ss_pred             HHHHHHhcCCCCHHHHHHhccHHHHHHHHhCCCCCCCCHHHHcCCCCHHHHHHHHHHhccCccccCCHHHHhcChhhh
Confidence                                        01112233333333322  7889999999999999999999999999744

>KOG0201 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=1.8e-45  Score=323.26  Aligned_cols=274  Identities=17%  Similarity=0.129  Sum_probs=224.2

Q ss_pred             CeeEEEEEEeeccCceEEEEEEecCCCCceEEEEecCCCCC-hHHHHHHHHHhhhccccccccccceeeecccCeeEEEE
Q 018699           47 GKKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFP-WEFYMYRQLDQRISGRERSSFGFAHRIHLYSDYSILVC  125 (351)
Q Consensus        47 ~~~Y~i~~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~~-~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~  125 (351)
                      ...|...+.||+|+||.||+|. +..+++.||||++.-+.. .+.+-.++-...+....++++...+.-+..+..++++|
T Consensus        12 ~~~~~~~~~IgrGsfG~Vyk~~-d~~t~k~vAiKii~Le~~~deIediqqei~~Ls~~~~~~it~yygsyl~g~~LwiiM   90 (467)
T KOG0201|consen   12 ELLYTKLELIGRGSFGEVYKAI-DNKTKKVVAIKIIDLEEAEDEIEDIQQEISVLSQCDSPNITEYYGSYLKGTKLWIIM   90 (467)
T ss_pred             ccccccchhccccccceeeeee-eccccceEEEEEechhhcchhhHHHHHHHHHHHhcCcchHHhhhhheeecccHHHHH
Confidence            3568888999999999999999 689999999999875422 22222222223333444455655566666788899999


Q ss_pred             EecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeeccCCCCCcccCC
Q 018699          126 DYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSGPWQDQG  205 (351)
Q Consensus       126 e~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~~~~~~~~~~  205 (351)
                      |||.||++.+.++.    +..+.+..+..++.+++.|+.|||.++.+|+|||+.||++.                 .+|.
T Consensus        91 ey~~gGsv~~lL~~----~~~~~E~~i~~ilre~l~~l~ylH~~~kiHrDIKaanil~s-----------------~~g~  149 (467)
T KOG0201|consen   91 EYCGGGSVLDLLKS----GNILDEFEIAVILREVLKGLDYLHSEKKIHRDIKAANILLS-----------------ESGD  149 (467)
T ss_pred             HHhcCcchhhhhcc----CCCCccceeeeehHHHHHHhhhhhhcceecccccccceeEe-----------------ccCc
Confidence            99999999999998    56779999999999999999999999999999999999999                 7788


Q ss_pred             eEEeecCCccccccCCCCccccccccCCCcccceeccCCCCCccchHhHHHHHHHHHHhCccccccccCCCCCce-eeec
Q 018699          206 LCLVDWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQEKKPWKFQVDTYGLCAIVHMMLHNSYMEIEKKASPDGGL-VYLP  284 (351)
Q Consensus       206 ~~l~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~p~~~~~~~~~~~~-~~~~  284 (351)
                      +||+|||.+......  .....+++||+.|||||++.+..|+.++||||||++.+||.+|.+|+....+...... ....
T Consensus       150 vkl~DfgVa~ql~~~--~~rr~tfvGTPfwMAPEVI~~~~Y~~KADIWSLGITaiEla~GePP~s~~hPmrvlflIpk~~  227 (467)
T KOG0201|consen  150 VKLADFGVAGQLTNT--VKRRKTFVGTPFWMAPEVIKQSGYDTKADIWSLGITAIELAKGEPPHSKLHPMRVLFLIPKSA  227 (467)
T ss_pred             EEEEecceeeeeech--hhccccccccccccchhhhccccccchhhhhhhhHHHHHHhcCCCCCcccCcceEEEeccCCC
Confidence            999999988654422  2334788999999999999998999999999999999999999999998776421111 1244


Q ss_pred             CcchhhhhHHHHHHHHHHHHhcCCCCCChHHHHHHHHHHHHHHhhChHHHHHHHHHHHHhh
Q 018699          285 KLSFKRYWKVELWKSLFTNLLNMSSGNDKEVLQNLQKSFQDYLCSNPQLLKNLKELLAKQR  345 (351)
Q Consensus       285 ~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~  345 (351)
                      ++.+...|+ +.+++||..||++||+.||+|.++|.|.|..--+.+..+.+-+.+..+.+.
T Consensus       228 PP~L~~~~S-~~~kEFV~~CL~k~P~~RpsA~~LLKh~FIk~a~k~s~L~~~i~r~~~~~~  287 (467)
T KOG0201|consen  228 PPRLDGDFS-PPFKEFVEACLDKNPEFRPSAKELLKHKFIKRAKKTSELKELIDRYKRWRV  287 (467)
T ss_pred             CCccccccC-HHHHHHHHHHhhcCcccCcCHHHHhhhHHHHhcCCchHHHHHHHHHHHHhh
Confidence            555556777 899999999999999999999999999998888888888888888777654

>KOG0033 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]

Probab=100.00  E-value=4.3e-46  Score=304.28  Aligned_cols=257  Identities=20%  Similarity=0.252  Sum_probs=207.5

Q ss_pred             EcCeeEEEEEEeeccCceEEEEEEecCCCCceEEEEecCCCCC--hHHHHHHHHHhhhccccccccccceeeecccCeeE
Q 018699           45 IGGKKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFP--WEFYMYRQLDQRISGRERSSFGFAHRIHLYSDYSI  122 (351)
Q Consensus        45 i~~~~Y~i~~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~~--~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  122 (351)
                      .-.+.|++.+.||+|+|++|+++. +..+|+.+|+|++.....  ...+.+......-..+.||+++.++.-.....+.|
T Consensus         8 ~f~d~y~l~e~igkG~FSvVrRc~-~~~tg~~fa~kiin~~k~~~~~~e~l~rEarIC~~LqHP~IvrL~~ti~~~~~~y   86 (355)
T KOG0033|consen    8 KFSDNYDVKEELGKGAFSVVRRCV-HKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHY   86 (355)
T ss_pred             ccchhhhHHHHHccCchHHHHHHH-hccchHHHHHHHhhhhhhccccHHHHHHHHHHHHhcCCCcEeehhhhhcccceeE
Confidence            345789999999999999999999 689999999998763211  12222222223334567889999888888899999


Q ss_pred             EEEEecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeeccCCCCCcc
Q 018699          123 LVCDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSGPWQ  202 (351)
Q Consensus       123 lv~e~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~~~~~~~  202 (351)
                      +|+|++.|++|-.-+-.+    ..+++..+..++.||++++.|+|.+||+|||+||+|+++-+.+              .
T Consensus        87 lvFe~m~G~dl~~eIV~R----~~ySEa~aSH~~rQiLeal~yCH~n~IvHRDvkP~nllLASK~--------------~  148 (355)
T KOG0033|consen   87 LVFDLVTGGELFEDIVAR----EFYSEADASHCIQQILEALAYCHSNGIVHRDLKPENLLLASKA--------------K  148 (355)
T ss_pred             EEEecccchHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHHhcCceeccCChhheeeeecc--------------C
Confidence            999999999998776664    4689999999999999999999999999999999999998654              3


Q ss_pred             cCCeEEeecCCccccccCCCCccccccccCCCcccceeccCCCCCccchHhHHHHHHHHHHhCccccccccCCCCCceee
Q 018699          203 DQGLCLVDWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQEKKPWKFQVDTYGLCAIVHMMLHNSYMEIEKKASPDGGLVY  282 (351)
Q Consensus       203 ~~~~~l~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~p~~~~~~~~~~~~~~  282 (351)
                      ...+||+|||.|...+   .+....+..|||.|||||++...+|+..+|||+.||++|-|+.|.+||..++...-...+.
T Consensus       149 ~A~vKL~~FGvAi~l~---~g~~~~G~~GtP~fmaPEvvrkdpy~kpvDiW~cGViLfiLL~G~~PF~~~~~~rlye~I~  225 (355)
T KOG0033|consen  149 GAAVKLADFGLAIEVN---DGEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYEQIK  225 (355)
T ss_pred             CCceeecccceEEEeC---CccccccccCCCcccCHHHhhcCCCCCcchhhhhhHHHHHHHhCCCCCCCccHHHHHHHHh
Confidence            4569999999997655   5566778899999999999999999999999999999999999999999855432211122


Q ss_pred             ecCcchhh-hhHH--HHHHHHHHHHhcCCCCCChHHHHHHHHHH
Q 018699          283 LPKLSFKR-YWKV--ELWKSLFTNLLNMSSGNDKEVLQNLQKSF  323 (351)
Q Consensus       283 ~~~~~~~~-~~~~--~~~~~li~~~L~~dP~~R~s~~e~l~~~~  323 (351)
                      .....++. .|+.  +.+++||++||+.||.+|+|+.|+|.|||
T Consensus       226 ~g~yd~~~~~w~~is~~Ak~LvrrML~~dP~kRIta~EAL~HpW  269 (355)
T KOG0033|consen  226 AGAYDYPSPEWDTVTPEAKSLIRRMLTVNPKKRITADEALKHPW  269 (355)
T ss_pred             ccccCCCCcccCcCCHHHHHHHHHHhccChhhhccHHHHhCCch
Confidence            22222221 3322  88999999999999999999999999997

>KOG0585 consensus Ca2+/calmodulin-dependent protein kinase kinase beta and related serine/threonine protein kinases [Signal transduction mechanisms]

Probab=100.00  E-value=1.1e-44  Score=320.69  Aligned_cols=256  Identities=20%  Similarity=0.175  Sum_probs=204.8

Q ss_pred             eeEEEEEEeeccCceEEEEEEecCCCCceEEEEecCCCCC--------------hHHHHHHHHHhhhcccccccccccee
Q 018699           48 KKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFP--------------WEFYMYRQLDQRISGRERSSFGFAHR  113 (351)
Q Consensus        48 ~~Y~i~~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~~--------------~e~~~~~~~~~~~~~~~~~~~~~~~~  113 (351)
                      +.|++.+.||+|.||.|-+|+ +..+++.||||++.+...              ...+..++.........|++++.+..
T Consensus        97 Nqy~l~~eiG~G~yGkVkLar-~~~~~~l~AiKil~K~~~~~~~~~~~~~a~~~~~~ekv~~EIailKkl~H~nVV~LiE  175 (576)
T KOG0585|consen   97 NQYELIKEIGSGQYGKVKLAR-DEVDGKLYAIKILPKKELRRQYGFPRQPAMKLMPIEKVRREIAILKKLHHPNVVKLIE  175 (576)
T ss_pred             hheehhhhhcCCccceEEEEe-ecCCCcEEEEEeechhhhhhhcccccccccccCcHHHHHHHHHHHHhcCCcCeeEEEE
Confidence            689999999999999999999 788999999999875321              11223333333445567788888888


Q ss_pred             eecc--cCeeEEEEEecCCCCHHHHHHHHHhhCCC-hhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcc
Q 018699          114 IHLY--SDYSILVCDYLSQGTLQDAINSYVVIGKS-MEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDEL  190 (351)
Q Consensus       114 ~~~~--~~~~~lv~e~~~~~sL~~~l~~~~~~~~~-l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~  190 (351)
                      +...  .+.+|+|+|||..|.+...-.     +++ +++.+++.++..++.||.|||.+||+||||||+|+|++      
T Consensus       176 vLDDP~s~~~YlVley~s~G~v~w~p~-----d~~els~~~Ar~ylrDvv~GLEYLH~QgiiHRDIKPsNLLl~------  244 (576)
T KOG0585|consen  176 VLDDPESDKLYLVLEYCSKGEVKWCPP-----DKPELSEQQARKYLRDVVLGLEYLHYQGIIHRDIKPSNLLLS------  244 (576)
T ss_pred             eecCcccCceEEEEEeccCCccccCCC-----CcccccHHHHHHHHHHHHHHHHHHHhcCeeccccchhheEEc------
Confidence            7754  578999999998887765433     345 99999999999999999999999999999999999999      


Q ss_pred             eeeccCCCCCcccCCeEEeecCCccccccC---CCCccccccccCCCcccceeccCC---CC-CccchHhHHHHHHHHHH
Q 018699          191 TVLDHDRSGPWQDQGLCLVDWGRGIDLHLF---PDNMEFEGDCRTSGFRCIEMQEKK---PW-KFQVDTYGLCAIVHMML  263 (351)
Q Consensus       191 ~~~~~~~~~~~~~~~~~l~Dfg~a~~~~~~---~~~~~~~~~~g~~~y~aPE~~~~~---~~-~~~~DiwslG~il~~l~  263 (351)
                                 ++|.+||+|||.+......   ..........|||.|+|||++.+.   .+ +++.||||+||+||+|+
T Consensus       245 -----------~~g~VKIsDFGVs~~~~~~~~~~~d~~L~~tvGTPAF~APE~c~~~~~~~~~g~a~DiWalGVTLYCll  313 (576)
T KOG0585|consen  245 -----------SDGTVKISDFGVSNEFPQGSDEGSDDQLSRTVGTPAFFAPELCSGGNSFSYSGFALDIWALGVTLYCLL  313 (576)
T ss_pred             -----------CCCcEEeeccceeeecccCCccccHHHHhhcCCCccccchHhhcCCCCccccchhhhhhhhhhhHHHhh
Confidence                       8899999999987643211   112335567899999999998662   23 48999999999999999


Q ss_pred             hCccccccccCCCCCceeeecCcchhhhh-HHHHHHHHHHHHhcCCCCCChHHHHHHHHHHHHH
Q 018699          264 HNSYMEIEKKASPDGGLVYLPKLSFKRYW-KVELWKSLFTNLLNMSSGNDKEVLQNLQKSFQDY  326 (351)
Q Consensus       264 ~g~~p~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~li~~~L~~dP~~R~s~~e~l~~~~~~~  326 (351)
                      .|+.||...........+...+..+|..- .++.+++||.+||.+||+.|++..++-.|||..+
T Consensus       314 fG~~PF~~~~~~~l~~KIvn~pL~fP~~pe~~e~~kDli~~lL~KdP~~Ri~l~~ik~Hpwvt~  377 (576)
T KOG0585|consen  314 FGQLPFFDDFELELFDKIVNDPLEFPENPEINEDLKDLIKRLLEKDPEQRITLPDIKLHPWVTR  377 (576)
T ss_pred             hccCCcccchHHHHHHHHhcCcccCCCcccccHHHHHHHHHHhhcChhheeehhhheecceecc
Confidence            99999998877655555556666666552 1288999999999999999999999999998554

>KOG0580 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=100.00  E-value=1.4e-44  Score=294.40  Aligned_cols=255  Identities=20%  Similarity=0.162  Sum_probs=222.7

Q ss_pred             cCeeEEEEEEeeccCceEEEEEEecCCCCceEEEEecCCCCChHHHHHHHHHhhh---ccccccccccceeeecccCeeE
Q 018699           46 GGKKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFPWEFYMYRQLDQRI---SGRERSSFGFAHRIHLYSDYSI  122 (351)
Q Consensus        46 ~~~~Y~i~~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~~~e~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~  122 (351)
                      .-++|++.+.||+|.||.||+|+ ...++-.||+|++.++.........++.+++   ..+.|+++.....++.+....|
T Consensus        20 ~l~dfeigr~LgkgkFG~vYlar-ekks~~IvalKVlfKsqi~~~~v~~qlrREiEIqs~L~hpnilrlY~~fhd~~riy   98 (281)
T KOG0580|consen   20 TLDDFEIGRPLGKGKFGNVYLAR-EKKSLFIVALKVLFKSQILKTQVEHQLRREIEIQSHLRHPNILRLYGYFHDSKRIY   98 (281)
T ss_pred             chhhccccccccCCccccEeEee-eccCCcEEEEeeeeHHHHHHhcchhhhhheeEeecccCCccHHhhhhheeccceeE
Confidence            34699999999999999999999 5788899999999877655555555565543   3557788888888888899999


Q ss_pred             EEEEecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeeccCCCCCcc
Q 018699          123 LVCDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSGPWQ  202 (351)
Q Consensus       123 lv~e~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~~~~~~~  202 (351)
                      +++||.++|+|...++...  ...+++..++.+++|++.|+.|+|..+|+||||||+|++++                 .
T Consensus        99 LilEya~~gel~k~L~~~~--~~~f~e~~~a~Yi~q~A~Al~y~h~k~VIhRdiKpenlLlg-----------------~  159 (281)
T KOG0580|consen   99 LILEYAPRGELYKDLQEGR--MKRFDEQRAATYIKQLANALLYCHLKRVIHRDIKPENLLLG-----------------S  159 (281)
T ss_pred             EEEEecCCchHHHHHHhcc--cccccccchhHHHHHHHHHHHHhccCCcccCCCCHHHhccC-----------------C
Confidence            9999999999999998543  57899999999999999999999999999999999999999                 7


Q ss_pred             cCCeEEeecCCccccccCCCCccccccccCCCcccceeccCCCCCccchHhHHHHHHHHHHhCccccccccCCCCCceee
Q 018699          203 DQGLCLVDWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQEKKPWKFQVDTYGLCAIVHMMLHNSYMEIEKKASPDGGLVY  282 (351)
Q Consensus       203 ~~~~~l~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~p~~~~~~~~~~~~~~  282 (351)
                      .+.+|++|||-+..    .+.....+.|||..|.+||...+..++..+|+|++|++.||++.|.+||........++.+.
T Consensus       160 ~~~lkiAdfGwsV~----~p~~kR~tlcgt~dyl~pEmv~~~~hd~~Vd~w~lgvl~yeflvg~ppFes~~~~etYkrI~  235 (281)
T KOG0580|consen  160 AGELKIADFGWSVH----APSNKRKTLCGTLDYLPPEMVEGRGHDKFVDLWSLGVLCYEFLVGLPPFESQSHSETYKRIR  235 (281)
T ss_pred             CCCeeccCCCceee----cCCCCceeeecccccCCHhhcCCCCccchhhHHHHHHHHHHHHhcCCchhhhhhHHHHHHHH
Confidence            88899999998854    22566778899999999999999999999999999999999999999999888666666666


Q ss_pred             ecCcchhhhhHHHHHHHHHHHHhcCCCCCChHHHHHHHHHHHH
Q 018699          283 LPKLSFKRYWKVELWKSLFTNLLNMSSGNDKEVLQNLQKSFQD  325 (351)
Q Consensus       283 ~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~~~~~~  325 (351)
                      .....+|...+ ..++|+|.+||.++|.+|++..|++.|||..
T Consensus       236 k~~~~~p~~is-~~a~dlI~~ll~~~p~~r~~l~~v~~hpwI~  277 (281)
T KOG0580|consen  236 KVDLKFPSTIS-GGAADLISRLLVKNPIERLALTEVMDHPWIV  277 (281)
T ss_pred             HccccCCcccC-hhHHHHHHHHhccCccccccHHHHhhhHHHH
Confidence            67777777777 8999999999999999999999999999853

>KOG0611 consensus Predicted serine/threonine protein kinase [General function prediction only]

Probab=100.00  E-value=8e-45  Score=316.01  Aligned_cols=252  Identities=17%  Similarity=0.244  Sum_probs=214.7

Q ss_pred             CeeEEEEEEeeccCceEEEEEEecCCCCceEEEEecCCCCChHHHHHHHHHh---hhccccccccccceeeecccCeeEE
Q 018699           47 GKKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFPWEFYMYRQLDQ---RISGRERSSFGFAHRIHLYSDYSIL  123 (351)
Q Consensus        47 ~~~Y~i~~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~~~e~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~l  123 (351)
                      ..+|++.+.||+|+||.|-+|+ ....|+.||||.++++......-+..+.+   ....+.|+++..++.++...+.+.+
T Consensus        52 kHRyE~~etLGkGTYGKVk~A~-e~~sgR~VAiKsIrKdkIkdeqDlvhIRREIeIMSsLNHPhII~IyEVFENkdKIvi  130 (668)
T KOG0611|consen   52 KHRYEITETLGKGTYGKVKLAY-EHKSGREVAIKSIRKDKIKDEQDLVHIRREIEIMSSLNHPHIIQIYEVFENKDKIVI  130 (668)
T ss_pred             hhHHHHHHHhcCCcccceeehh-hccCCcEeehhhhhhhhcccHHHHHHHHHHHHHHhhcCCCceeehhhhhcCCceEEE
Confidence            4799999999999999999999 67889999999998875543333333333   3445678889899999999999999


Q ss_pred             EEEecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeeccCCCCCccc
Q 018699          124 VCDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSGPWQD  203 (351)
Q Consensus       124 v~e~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~~~~~~~~  203 (351)
                      ||||..+|.|++++..+    +.+++.+++.++.||+.|+.|+|.++++|||||.+||++|                 .+
T Consensus       131 vMEYaS~GeLYDYiSer----~~LsErEaRhfFRQIvSAVhYCHknrVvHRDLKLENILLD-----------------~N  189 (668)
T KOG0611|consen  131 VMEYASGGELYDYISER----GSLSEREARHFFRQIVSAVHYCHKNRVVHRDLKLENILLD-----------------QN  189 (668)
T ss_pred             EEEecCCccHHHHHHHh----ccccHHHHHHHHHHHHHHHHHHhhccceecccchhheeec-----------------CC
Confidence            99999999999999984    7899999999999999999999999999999999999999                 77


Q ss_pred             CCeEEeecCCccccccCCCCccccccccCCCcccceeccCCCCC-ccchHhHHHHHHHHHHhCccccccccCC------C
Q 018699          204 QGLCLVDWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQEKKPWK-FQVDTYGLCAIVHMMLHNSYMEIEKKAS------P  276 (351)
Q Consensus       204 ~~~~l~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~-~~~DiwslG~il~~l~~g~~p~~~~~~~------~  276 (351)
                      +++||+|||++   +.+.......++||++.|.+||++.|.+|. +.+|-||||+++|.|..|..||...+..      .
T Consensus       190 ~NiKIADFGLS---Nly~~~kfLqTFCGSPLYASPEIvNG~PY~GPEVDsWsLGvLLYtLVyGtMPFDG~Dhk~lvrQIs  266 (668)
T KOG0611|consen  190 NNIKIADFGLS---NLYADKKFLQTFCGSPLYASPEIVNGTPYKGPEVDSWSLGVLLYTLVYGTMPFDGRDHKRLVRQIS  266 (668)
T ss_pred             CCeeeeccchh---hhhccccHHHHhcCCcccCCccccCCCCCCCCccchhhHHHHHHHHhhcccccCCchHHHHHHHhh
Confidence            88999999998   455667778999999999999999999996 9999999999999999999999875532      2


Q ss_pred             CCceeeecCcchhhhhHHHHHHHHHHHHhcCCCCCChHHHHHHHHHHHHHHhhCh
Q 018699          277 DGGLVYLPKLSFKRYWKVELWKSLFTNLLNMSSGNDKEVLQNLQKSFQDYLCSNP  331 (351)
Q Consensus       277 ~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~~~~~~~~~~~~  331 (351)
                      .+.|..+..   |     ..+.-||+.||..+|++|.|.+++-.|||.+|=...+
T Consensus       267 ~GaYrEP~~---P-----SdA~gLIRwmLmVNP~RRATieDiAsHWWvNwgy~~~  313 (668)
T KOG0611|consen  267 RGAYREPET---P-----SDASGLIRWMLMVNPERRATIEDIASHWWVNWGYNMP  313 (668)
T ss_pred             cccccCCCC---C-----chHHHHHHHHHhcCcccchhHHHHhhhheeecccccc
Confidence            333322221   1     4568899999999999999999999999987755444

>KOG0582 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=7.1e-43  Score=307.29  Aligned_cols=266  Identities=21%  Similarity=0.229  Sum_probs=213.9

Q ss_pred             cceEEEEcCeeEEEEEEeeccCceEEEEEEecCCCCceEEEEecCCCCCh-HHHHHHHHHhhhccccccccccceeeecc
Q 018699           39 RNKTIEIGGKKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFPW-EFYMYRQLDQRISGRERSSFGFAHRIHLY  117 (351)
Q Consensus        39 ~~~~~~i~~~~Y~i~~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~~~-e~~~~~~~~~~~~~~~~~~~~~~~~~~~~  117 (351)
                      ....+.++.+.|++...||.|..++||+|+. ...+++||||++.-+..+ +...++...+......|||++..+-.+..
T Consensus        17 ~~~~~p~n~~~YeL~e~IG~G~sa~V~~A~c-~p~~e~VAIK~inLEkc~~~ld~l~kE~~~msl~~HPNIv~~~~sFvv   95 (516)
T KOG0582|consen   17 SEKEFPLNAKDYELQEVIGVGASAVVYLARC-IPTNEVVAIKIINLEKCNNDLDALRKEVQTMSLIDHPNIVTYHCSFVV   95 (516)
T ss_pred             ccccCCCCccceeEEEEEeccceeEeeeeee-cccCCEEEEEEeehhhhhhhHHHHHHHHHHhhhcCCCCcceEEEEEEe
Confidence            3445666789999999999999999999994 677899999999865443 33444555555667789999999999999


Q ss_pred             cCeeEEEEEecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeeccCC
Q 018699          118 SDYSILVCDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDR  197 (351)
Q Consensus       118 ~~~~~lv~e~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~~  197 (351)
                      +..+|+||.||.+|++.+++....  ...+++..+..|.++++.||.|||.+|-+|||||+.||+++             
T Consensus        96 ~~~LWvVmpfMa~GS~ldIik~~~--~~Gl~E~~Ia~iLre~LkaL~YLH~~G~IHRdvKAgnILi~-------------  160 (516)
T KOG0582|consen   96 DSELWVVMPFMAGGSLLDIIKTYY--PDGLEEASIATILREVLKALDYLHQNGHIHRDVKAGNILID-------------  160 (516)
T ss_pred             cceeEEeehhhcCCcHHHHHHHHc--cccccHHHHHHHHHHHHHHHHHHHhcCceecccccccEEEc-------------
Confidence            999999999999999999999876  34599999999999999999999999999999999999999             


Q ss_pred             CCCcccCCeEEeecCCccccccCCCCcc--ccccccCCCcccceec--cCCCCCccchHhHHHHHHHHHHhCcccccccc
Q 018699          198 SGPWQDQGLCLVDWGRGIDLHLFPDNME--FEGDCRTSGFRCIEMQ--EKKPWKFQVDTYGLCAIVHMMLHNSYMEIEKK  273 (351)
Q Consensus       198 ~~~~~~~~~~l~Dfg~a~~~~~~~~~~~--~~~~~g~~~y~aPE~~--~~~~~~~~~DiwslG~il~~l~~g~~p~~~~~  273 (351)
                          ++|.++|+|||.+..+........  +.+..||++|||||++  ....|++++||||+|++..||.+|+.||....
T Consensus       161 ----~dG~VkLadFgvsa~l~~~G~R~~~rf~tfvgtp~wmAPEvl~q~~~GYdfKaDIwSfGITA~ELA~G~aPf~k~p  236 (516)
T KOG0582|consen  161 ----SDGTVKLADFGVSASLFDSGDRQVTRFNTFVGTPCWMAPEVLMQQLHGYDFKADIWSFGITACELAHGHAPFSKYP  236 (516)
T ss_pred             ----CCCcEEEcCceeeeeecccCceeeEeeccccCcccccChHHhhhcccCccchhhhhhhhHHHHHHhcCCCCcccCC
Confidence                899999999997765443332221  2567899999999995  33679999999999999999999999998655


Q ss_pred             CCCCCceeee--c--------CcchhhhhHHHHHHHHHHHHhcCCCCCChHHHHHHHHHHHH
Q 018699          274 ASPDGGLVYL--P--------KLSFKRYWKVELWKSLFTNLLNMSSGNDKEVLQNLQKSFQD  325 (351)
Q Consensus       274 ~~~~~~~~~~--~--------~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~~~~~~  325 (351)
                      +.........  +        .......++ ..++.+|..||.+||.+|||+.++|.|+|..
T Consensus       237 PmkvLl~tLqn~pp~~~t~~~~~d~~k~~~-ksf~e~i~~CL~kDP~kRptAskLlkh~FFk  297 (516)
T KOG0582|consen  237 PMKVLLLTLQNDPPTLLTSGLDKDEDKKFS-KSFREMIALCLVKDPSKRPTASKLLKHAFFK  297 (516)
T ss_pred             hHHHHHHHhcCCCCCcccccCChHHhhhhc-HHHHHHHHHHhhcCcccCCCHHHHhccHHHh
Confidence            4311000000  1        111112233 6899999999999999999999999999844

>cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=6.9e-44  Score=319.00  Aligned_cols=250  Identities=18%  Similarity=0.193  Sum_probs=198.7

Q ss_pred             eeEEEEEEeeccCceEEEEEEecCCCCceEEEEecCCCCChH---HHHHHHHHhhhccccccccccceeeecccCeeEEE
Q 018699           48 KKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFPWE---FYMYRQLDQRISGRERSSFGFAHRIHLYSDYSILV  124 (351)
Q Consensus        48 ~~Y~i~~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~~~e---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv  124 (351)
                      ++|++.+.||+|+||+||+|. +..+++.||+|++.......   ...+...........|++++.........+..|+|
T Consensus         1 ~~y~~~~~lg~G~~g~Vy~~~-~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv   79 (291)
T cd05612           1 DDLERIKTVGTGTFGRVHLVR-DRISEHYYALKVMAIPEVIRLKQEQHVHNEKRVLKEVSHPFIIRLFWTEHDQRFLYML   79 (291)
T ss_pred             CCceeeeeeecCCCeEEEEEE-EcCCCCEEEEEEEEHHHHhhhHHHHHHHHHHHHHHhCCCCcHhhhHhhhccCCeEEEE
Confidence            479999999999999999999 56778999999986532211   11222222334455678888877777778899999


Q ss_pred             EEecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeeccCCCCCcccC
Q 018699          125 CDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSGPWQDQ  204 (351)
Q Consensus       125 ~e~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~~~~~~~~~  204 (351)
                      |||+++++|.+++..    ...+++..+..++.|++.||+|||++||+||||+|+||+++                 .++
T Consensus        80 ~e~~~~~~L~~~~~~----~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~NIli~-----------------~~~  138 (291)
T cd05612          80 MEYVPGGELFSYLRN----SGRFSNSTGLFYASEIVCALEYLHSKEIVYRDLKPENILLD-----------------KEG  138 (291)
T ss_pred             EeCCCCCCHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHeEEC-----------------CCC
Confidence            999999999999987    46789999999999999999999999999999999999998                 677


Q ss_pred             CeEEeecCCccccccCCCCccccccccCCCcccceeccCCCCCccchHhHHHHHHHHHHhCccccccccCCCCCceeeec
Q 018699          205 GLCLVDWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQEKKPWKFQVDTYGLCAIVHMMLHNSYMEIEKKASPDGGLVYLP  284 (351)
Q Consensus       205 ~~~l~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~p~~~~~~~~~~~~~~~~  284 (351)
                      .++|+|||++....     .......|++.|+|||++.+..++.++|||||||++|+|++|..||...............
T Consensus       139 ~~kl~Dfg~~~~~~-----~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~l~~g~~pf~~~~~~~~~~~i~~~  213 (291)
T cd05612         139 HIKLTDFGFAKKLR-----DRTWTLCGTPEYLAPEVIQSKGHNKAVDWWALGILIYEMLVGYPPFFDDNPFGIYEKILAG  213 (291)
T ss_pred             CEEEEecCcchhcc-----CCcccccCChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhC
Confidence            89999999886432     1123356899999999999888999999999999999999999999765432111111122


Q ss_pred             CcchhhhhHHHHHHHHHHHHhcCCCCCChH-----HHHHHHHHHHH
Q 018699          285 KLSFKRYWKVELWKSLFTNLLNMSSGNDKE-----VLQNLQKSFQD  325 (351)
Q Consensus       285 ~~~~~~~~~~~~~~~li~~~L~~dP~~R~s-----~~e~l~~~~~~  325 (351)
                      ...++...+ ..+++||.+||+.||.+|++     +.+++.|+|..
T Consensus       214 ~~~~~~~~~-~~~~~li~~~l~~dp~~R~~~~~~~~~~~l~h~~~~  258 (291)
T cd05612         214 KLEFPRHLD-LYAKDLIKKLLVVDRTRRLGNMKNGADDVKNHRWFK  258 (291)
T ss_pred             CcCCCccCC-HHHHHHHHHHcCCCHHHccCCccCCHHHHhcCcccc
Confidence            233344444 78999999999999999995     99999998754

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt

>cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B

Probab=100.00  E-value=8e-44  Score=323.22  Aligned_cols=246  Identities=19%  Similarity=0.231  Sum_probs=194.8

Q ss_pred             EEeeccCceEEEEEEecCCCCceEEEEecCCCCC---hHHHHHHHHHhhhccccccccccceeeecccCeeEEEEEecCC
Q 018699           54 GCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFP---WEFYMYRQLDQRISGRERSSFGFAHRIHLYSDYSILVCDYLSQ  130 (351)
Q Consensus        54 ~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~~---~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~  130 (351)
                      +.||+|+||.||+|+ +..+|+.||+|++.+...   .+..........+....|++++.....+...+..|+||||+++
T Consensus         1 ~~lG~G~~g~Vy~~~-~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~lv~e~~~~   79 (323)
T cd05571           1 KLLGKGTFGKVILVR-EKATGKYYAMKILKKEVIIAKDEVAHTLTESRVLQNTRHPFLTALKYSFQTHDRLCFVMEYANG   79 (323)
T ss_pred             CeeeeCCCeEEEEEE-ECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCCEEEEEEcCCEEEEEEeCCCC
Confidence            469999999999999 567889999999875422   1111122222334455678888888888888999999999999


Q ss_pred             CCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeeccCCCCCcccCCeEEee
Q 018699          131 GTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSGPWQDQGLCLVD  210 (351)
Q Consensus       131 ~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~~~~~~~~~~~~l~D  210 (351)
                      ++|.+++..    +..+++..++.++.||+.||+|||++||+||||||+||+++                 .++.++|+|
T Consensus        80 ~~L~~~l~~----~~~~~~~~~~~~~~qi~~~L~~lH~~~ivHrDlkp~NIll~-----------------~~~~~kl~D  138 (323)
T cd05571          80 GELFFHLSR----ERVFSEDRARFYGAEIVSALGYLHSCDVVYRDLKLENLMLD-----------------KDGHIKITD  138 (323)
T ss_pred             CcHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHhCCeEeCCCCHHHEEEC-----------------CCCCEEEee
Confidence            999999876    57899999999999999999999999999999999999999                 677899999


Q ss_pred             cCCccccccCCCCccccccccCCCcccceeccCCCCCccchHhHHHHHHHHHHhCccccccccCCCCCceeeecCcchhh
Q 018699          211 WGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQEKKPWKFQVDTYGLCAIVHMMLHNSYMEIEKKASPDGGLVYLPKLSFKR  290 (351)
Q Consensus       211 fg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~  290 (351)
                      ||++....  .........+||+.|+|||++.+..++.++|||||||++|+|++|..||..................++.
T Consensus       139 fG~a~~~~--~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~~~~~~~~~~~~~~~p~  216 (323)
T cd05571         139 FGLCKEGI--SDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRFPR  216 (323)
T ss_pred             CCCCcccc--cCCCcccceecCccccChhhhcCCCCCccccCcccchhhhhhhcCCCCCCCCCHHHHHHHHHcCCCCCCC
Confidence            99886421  1122334567899999999999999999999999999999999999999754332111111122333444


Q ss_pred             hhHHHHHHHHHHHHhcCCCCCCh-----HHHHHHHHHHH
Q 018699          291 YWKVELWKSLFTNLLNMSSGNDK-----EVLQNLQKSFQ  324 (351)
Q Consensus       291 ~~~~~~~~~li~~~L~~dP~~R~-----s~~e~l~~~~~  324 (351)
                      ..+ +.+.+||.+||+.||++||     ++.++++|+|.
T Consensus       217 ~~~-~~~~~li~~~L~~dP~~R~~~~~~~~~~ll~h~~f  254 (323)
T cd05571         217 TLS-PEAKSLLAGLLKKDPKQRLGGGPEDAKEIMEHRFF  254 (323)
T ss_pred             CCC-HHHHHHHHHHccCCHHHcCCCCCCCHHHHHcCCCc
Confidence            455 8899999999999999999     89999999874

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be

>PTZ00263 protein kinase A catalytic subunit; Provisional

Probab=100.00  E-value=1.6e-43  Score=322.03  Aligned_cols=250  Identities=15%  Similarity=0.165  Sum_probs=199.6

Q ss_pred             CeeEEEEEEeeccCceEEEEEEecCCCCceEEEEecCCCCChH---HHHHHHHHhhhccccccccccceeeecccCeeEE
Q 018699           47 GKKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFPWE---FYMYRQLDQRISGRERSSFGFAHRIHLYSDYSIL  123 (351)
Q Consensus        47 ~~~Y~i~~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~~~e---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  123 (351)
                      -++|++.+.||+|+||.||+|+ +..+++.||+|++.+.....   ...+......+....|++++.....+..++..|+
T Consensus        17 ~~~y~~~~~lg~G~~g~V~~~~-~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~l   95 (329)
T PTZ00263         17 LSDFEMGETLGTGSFGRVRIAK-HKGTGEYYAIKCLKKREILKMKQVQHVAQEKSILMELSHPFIVNMMCSFQDENRVYF   95 (329)
T ss_pred             chheEEEEEEEecCCeEEEEEE-ECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCcEEEEEEcCCEEEE
Confidence            4689999999999999999999 56778999999986532111   1111122223445577888888888888899999


Q ss_pred             EEEecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeeccCCCCCccc
Q 018699          124 VCDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSGPWQD  203 (351)
Q Consensus       124 v~e~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~~~~~~~~  203 (351)
                      ||||+++++|.+++..    ...+++..+..++.|++.||+|||++||+||||||+||+++                 .+
T Consensus        96 v~e~~~~~~L~~~l~~----~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~dlkp~NIll~-----------------~~  154 (329)
T PTZ00263         96 LLEFVVGGELFTHLRK----AGRFPNDVAKFYHAELVLAFEYLHSKDIIYRDLKPENLLLD-----------------NK  154 (329)
T ss_pred             EEcCCCCChHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHEEEC-----------------CC
Confidence            9999999999999987    46789999999999999999999999999999999999999                 77


Q ss_pred             CCeEEeecCCccccccCCCCccccccccCCCcccceeccCCCCCccchHhHHHHHHHHHHhCccccccccCCCCCceeee
Q 018699          204 QGLCLVDWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQEKKPWKFQVDTYGLCAIVHMMLHNSYMEIEKKASPDGGLVYL  283 (351)
Q Consensus       204 ~~~~l~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~p~~~~~~~~~~~~~~~  283 (351)
                      +.++|+|||++....     .......|++.|+|||++.+..++.++|||||||++|+|++|..||..............
T Consensus       155 ~~~kl~Dfg~~~~~~-----~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~i~~  229 (329)
T PTZ00263        155 GHVKVTDFGFAKKVP-----DRTFTLCGTPEYLAPEVIQSKGHGKAVDWWTMGVLLYEFIAGYPPFFDDTPFRIYEKILA  229 (329)
T ss_pred             CCEEEeeccCceEcC-----CCcceecCChhhcCHHHHcCCCCCCcceeechHHHHHHHHcCCCCCCCCCHHHHHHHHhc
Confidence            889999999986432     112345789999999999998899999999999999999999999975443211111112


Q ss_pred             cCcchhhhhHHHHHHHHHHHHhcCCCCCChH-----HHHHHHHHHH
Q 018699          284 PKLSFKRYWKVELWKSLFTNLLNMSSGNDKE-----VLQNLQKSFQ  324 (351)
Q Consensus       284 ~~~~~~~~~~~~~~~~li~~~L~~dP~~R~s-----~~e~l~~~~~  324 (351)
                      ....+|...+ ..+++||.+||+.||.+|++     +.+++.|||.
T Consensus       230 ~~~~~p~~~~-~~~~~li~~~L~~dP~~R~~~~~~~~~~ll~hp~f  274 (329)
T PTZ00263        230 GRLKFPNWFD-GRARDLVKGLLQTDHTKRLGTLKGGVADVKNHPYF  274 (329)
T ss_pred             CCcCCCCCCC-HHHHHHHHHHhhcCHHHcCCCCCCCHHHHhcCCcc
Confidence            2333444444 78999999999999999997     6999999874

>KOG0610 consensus Putative serine/threonine protein kinase [General function prediction only]

Probab=100.00  E-value=1.5e-43  Score=309.00  Aligned_cols=263  Identities=19%  Similarity=0.182  Sum_probs=213.4

Q ss_pred             EEEEcCeeEEEEEEeeccCceEEEEEEecCCCCceEEEEecCCCCChHHHHHHH---HHhhhccccccccccceeeeccc
Q 018699           42 TIEIGGKKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFPWEFYMYRQ---LDQRISGRERSSFGFAHRIHLYS  118 (351)
Q Consensus        42 ~~~i~~~~Y~i~~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~~~e~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~  118 (351)
                      ...+.-+.|++.+.||.|.-|+||+|+ ...++..+|+|++.+........+..   .++.+....||.++.+...+..+
T Consensus        71 ~~~l~l~~f~llk~LG~GdiG~VyL~~-l~~t~~~fAmKVmdK~~l~~rkKl~Ra~tE~eIL~~lDHPFlPTLYa~fet~  149 (459)
T KOG0610|consen   71 DGSLGLRHFRLLKRLGCGDIGTVYLVE-LRGTNCLFAMKVMDKESLASRKKLKRAQTEREILSLLDHPFLPTLYASFETD  149 (459)
T ss_pred             CCccCHHHHHHHHHcCCCCceeEEEEE-ecCCCceEEEEEecHHHHhhhhHHHHHHHHHHHHHhcCCCccchhhheeecc
Confidence            345666899999999999999999999 46777999999998765543222222   22345667899999999999999


Q ss_pred             CeeEEEEEecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeeccCCC
Q 018699          119 DYSILVCDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRS  198 (351)
Q Consensus       119 ~~~~lv~e~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~~~  198 (351)
                      .+.|++||||+||+|..++++..  ++.+++..++.++.+++.||.|||-.|||+|||||+|||+.              
T Consensus       150 ~~~cl~meyCpGGdL~~LrqkQp--~~~fse~~aRFYaAEvl~ALEYLHmlGivYRDLKPENILvr--------------  213 (459)
T KOG0610|consen  150 KYSCLVMEYCPGGDLHSLRQKQP--GKRFSESAARFYAAEVLLALEYLHMLGIVYRDLKPENILVR--------------  213 (459)
T ss_pred             ceeEEEEecCCCccHHHHHhhCC--CCccchhhHHHHHHHHHHHHHHHHhhceeeccCCcceeEEe--------------
Confidence            99999999999999999998754  67899999999999999999999999999999999999999              


Q ss_pred             CCcccCCeEEeecCCcccccc------------------------------------------------------CCCCc
Q 018699          199 GPWQDQGLCLVDWGRGIDLHL------------------------------------------------------FPDNM  224 (351)
Q Consensus       199 ~~~~~~~~~l~Dfg~a~~~~~------------------------------------------------------~~~~~  224 (351)
                         .+|.+.|+||.++.....                                                      .+.+.
T Consensus       214 ---edGHIMLsDFDLS~~~~~~Pt~~~s~~~~~~~~~~~~~~~~~s~f~~r~~~~~~~~~k~~~~~~~~~p~~~aep~~~  290 (459)
T KOG0610|consen  214 ---EDGHIMLSDFDLSLRCPVSPTLVKSSSPRSSGSQPSCRSRQPSCFSPRCLSSSKKRKKKDESASRSLPELVAEPTGA  290 (459)
T ss_pred             ---cCCcEEeeeccccccCCCCCeeeccCCCCCCCCCcccccccccccccchhccccccccccccccccchhhhcCCCCc
Confidence               666677777765432110                                                      00111


Q ss_pred             cccccccCCCcccceeccCCCCCccchHhHHHHHHHHHHhCccccccccCCCCCceeeecCcchhhhh-HHHHHHHHHHH
Q 018699          225 EFEGDCRTSGFRCIEMQEKKPWKFQVDTYGLCAIVHMMLHNSYMEIEKKASPDGGLVYLPKLSFKRYW-KVELWKSLFTN  303 (351)
Q Consensus       225 ~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~li~~  303 (351)
                      .....+||-.|+|||++.|...+.++|+|+||+++|||+.|..||...+...+...+...+..+|... .+..++|||++
T Consensus       291 RSnSFVGThEYlAPEvI~G~GHgsAVDWWtfGIflYEmLyG~TPFKG~~~~~Tl~NIv~~~l~Fp~~~~vs~~akDLIr~  370 (459)
T KOG0610|consen  291 RSNSFVGTHEYLAPEVIRGEGHGSAVDWWTFGIFLYEMLYGTTPFKGSNNKETLRNIVGQPLKFPEEPEVSSAAKDLIRK  370 (459)
T ss_pred             cccccccccccccceeeecCCCCchhhHHHHHHHHHHHHhCCCCcCCCCchhhHHHHhcCCCcCCCCCcchhHHHHHHHH
Confidence            22345789999999999999999999999999999999999999998887766555555555555442 11789999999


Q ss_pred             HhcCCCCCChH----HHHHHHHHHH
Q 018699          304 LLNMSSGNDKE----VLQNLQKSFQ  324 (351)
Q Consensus       304 ~L~~dP~~R~s----~~e~l~~~~~  324 (351)
                      +|.+||.+|..    +.|+-+|||.
T Consensus       371 LLvKdP~kRlg~~rGA~eIK~HpFF  395 (459)
T KOG0610|consen  371 LLVKDPSKRLGSKRGAAEIKRHPFF  395 (459)
T ss_pred             HhccChhhhhccccchHHhhcCccc
Confidence            99999999998    8999999873

>PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional

Probab=100.00  E-value=1.8e-43  Score=322.63  Aligned_cols=255  Identities=15%  Similarity=0.140  Sum_probs=202.9

Q ss_pred             EEcCeeEEEEEEeeccCceEEEEEEecCCCCceEEEEecCCCCCh---HHHHHHHHHhhhccccccccccceeeecccCe
Q 018699           44 EIGGKKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFPW---EFYMYRQLDQRISGRERSSFGFAHRIHLYSDY  120 (351)
Q Consensus        44 ~i~~~~Y~i~~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~~~---e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  120 (351)
                      .+.-++|++.+.||+|+||.||+|.++...+..||+|.+.+....   ....+......+....|++++.....+..++.
T Consensus        26 ~~~~~~y~~~~~ig~G~~g~Vy~a~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~  105 (340)
T PTZ00426         26 KMKYEDFNFIRTLGTGSFGRVILATYKNEDFPPVAIKRFEKSKIIKQKQVDHVFSERKILNYINHPFCVNLYGSFKDESY  105 (340)
T ss_pred             CCChhhcEEEEEEeecCCeEEEEEEEECCCCeEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCCcceEEEEEeCCE
Confidence            345578999999999999999999865555578999987643211   11122222233445568889888888888899


Q ss_pred             eEEEEEecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeeccCCCCC
Q 018699          121 SILVCDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSGP  200 (351)
Q Consensus       121 ~~lv~e~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~~~~~  200 (351)
                      .|+||||+++|+|.+++..    +..+++..+..++.|++.||.|||++||+||||||+||+++                
T Consensus       106 ~~lv~Ey~~~g~L~~~i~~----~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDLkp~NILl~----------------  165 (340)
T PTZ00426        106 LYLVLEFVIGGEFFTFLRR----NKRFPNDVGCFYAAQIVLIFEYLQSLNIVYRDLKPENLLLD----------------  165 (340)
T ss_pred             EEEEEeCCCCCcHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHCCeEccCCCHHHEEEC----------------
Confidence            9999999999999999987    56899999999999999999999999999999999999998                


Q ss_pred             cccCCeEEeecCCccccccCCCCccccccccCCCcccceeccCCCCCccchHhHHHHHHHHHHhCccccccccCCCCCce
Q 018699          201 WQDQGLCLVDWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQEKKPWKFQVDTYGLCAIVHMMLHNSYMEIEKKASPDGGL  280 (351)
Q Consensus       201 ~~~~~~~l~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~p~~~~~~~~~~~~  280 (351)
                       .++.++|+|||++....     .......||+.|+|||++.+..++.++|||||||++|+|++|..||...+.......
T Consensus       166 -~~~~ikL~DFG~a~~~~-----~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~~~~~~  239 (340)
T PTZ00426        166 -KDGFIKMTDFGFAKVVD-----TRTYTLCGTPEYIAPEILLNVGHGKAADWWTLGIFIYEILVGCPPFYANEPLLIYQK  239 (340)
T ss_pred             -CCCCEEEecCCCCeecC-----CCcceecCChhhcCHHHHhCCCCCccccccchhhHHHHHhcCCCCCCCCCHHHHHHH
Confidence             67889999999986432     122345789999999999988889999999999999999999999986544311111


Q ss_pred             eeecCcchhhhhHHHHHHHHHHHHhcCCCCCCh-----HHHHHHHHHHHH
Q 018699          281 VYLPKLSFKRYWKVELWKSLFTNLLNMSSGNDK-----EVLQNLQKSFQD  325 (351)
Q Consensus       281 ~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~-----s~~e~l~~~~~~  325 (351)
                      .......+|..++ +.+.++|++||+.||.+|+     ++.+++.|||..
T Consensus       240 i~~~~~~~p~~~~-~~~~~li~~~l~~dp~~R~~~~~~~~~~~~~hp~f~  288 (340)
T PTZ00426        240 ILEGIIYFPKFLD-NNCKHLMKKLLSHDLTKRYGNLKKGAQNVKEHPWFG  288 (340)
T ss_pred             HhcCCCCCCCCCC-HHHHHHHHHHcccCHHHcCCCCCCCHHHHHcCCCcC
Confidence            2222233444455 7899999999999999996     899999998743

>cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C

Probab=100.00  E-value=8.1e-43  Score=316.79  Aligned_cols=251  Identities=18%  Similarity=0.187  Sum_probs=192.7

Q ss_pred             eEEEEEEeeccCceEEEEEEecCCCCceEEEEecCCCCCh---HHHHHHHHHhhhccc-cccccccceeeecccCeeEEE
Q 018699           49 KYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFPW---EFYMYRQLDQRISGR-ERSSFGFAHRIHLYSDYSILV  124 (351)
Q Consensus        49 ~Y~i~~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~~~---e~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~lv  124 (351)
                      +|++.+.||+|+||.||+|+ +..+++.||+|++.+....   ...........+... .++++...+..+...+..|+|
T Consensus         1 ~y~~~~~lg~G~~g~Vy~~~-~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv   79 (324)
T cd05587           1 DFNFLMVLGKGSFGKVMLAE-RKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYFV   79 (324)
T ss_pred             CceEEEEEeeccCeEEEEEE-ECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhcCCCCceeeeEEEEEcCCEEEEE
Confidence            48999999999999999999 5677899999998754211   111111111112222 334466666677778899999


Q ss_pred             EEecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeeccCCCCCcccC
Q 018699          125 CDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSGPWQDQ  204 (351)
Q Consensus       125 ~e~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~~~~~~~~~  204 (351)
                      |||+++++|.+++..    ...+++..+..++.||+.||.|||++||+||||||+||+++                 .++
T Consensus        80 ~E~~~~g~L~~~~~~----~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dlkp~Nill~-----------------~~~  138 (324)
T cd05587          80 MEYVNGGDLMYHIQQ----VGKFKEPHAVFYAAEIAIGLFFLHSKGIIYRDLKLDNVMLD-----------------AEG  138 (324)
T ss_pred             EcCCCCCcHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEEc-----------------CCC
Confidence            999999999999876    46789999999999999999999999999999999999999                 678


Q ss_pred             CeEEeecCCccccccCCCCccccccccCCCcccceeccCCCCCccchHhHHHHHHHHHHhCccccccccCCCCCceeeec
Q 018699          205 GLCLVDWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQEKKPWKFQVDTYGLCAIVHMMLHNSYMEIEKKASPDGGLVYLP  284 (351)
Q Consensus       205 ~~~l~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~p~~~~~~~~~~~~~~~~  284 (351)
                      .++|+|||++....  ..........|++.|+|||++.+..++.++||||+||++|+|++|..||...............
T Consensus       139 ~~kL~Dfg~~~~~~--~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~pf~~~~~~~~~~~i~~~  216 (324)
T cd05587         139 HIKIADFGMCKENI--FGGKTTRTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDGEDEDELFQSIMEH  216 (324)
T ss_pred             CEEEeecCcceecC--CCCCceeeecCCccccChhhhcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHcC
Confidence            89999999875321  1122234457899999999999999999999999999999999999999754432111111122


Q ss_pred             CcchhhhhHHHHHHHHHHHHhcCCCCCChHH-----HHHHHHHHH
Q 018699          285 KLSFKRYWKVELWKSLFTNLLNMSSGNDKEV-----LQNLQKSFQ  324 (351)
Q Consensus       285 ~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~-----~e~l~~~~~  324 (351)
                      ...++...+ ..+.++|.+||.+||.+|+++     .++++|||.
T Consensus       217 ~~~~~~~~~-~~~~~li~~~l~~~P~~R~~~~~~~~~~~~~hp~~  260 (324)
T cd05587         217 NVSYPKSLS-KEAVSICKGLLTKHPAKRLGCGPTGERDIREHAFF  260 (324)
T ss_pred             CCCCCCCCC-HHHHHHHHHHhhcCHHHcCCCCCCCHHHHhcCCCc
Confidence            233344445 788999999999999999986     788888863

Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory

>cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4

Probab=100.00  E-value=1.8e-42  Score=309.02  Aligned_cols=253  Identities=19%  Similarity=0.209  Sum_probs=195.6

Q ss_pred             eEEEEEEeeccCceEEEEEEecCCCCceEEEEecCCCCChHH---HHHHHHHhhhccccccccccceeeecccCeeEEEE
Q 018699           49 KYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFPWEF---YMYRQLDQRISGRERSSFGFAHRIHLYSDYSILVC  125 (351)
Q Consensus        49 ~Y~i~~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~~~e~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~  125 (351)
                      .|++.+.||+|+||.||+|. +..+++.||+|.+.+......   ..............+++++.....+...+..++||
T Consensus         1 ~f~~~~~lg~G~~g~V~~~~-~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~iv~~~~~~~~~~~~~lv~   79 (285)
T cd05631           1 TFRHYRVLGKGGFGEVCACQ-VRATGKMYACKKLEKKRIKKRKGEAMALNEKRILEKVNSRFVVSLAYAYETKDALCLVL   79 (285)
T ss_pred             CceEEEEEecCCCEEEEEEE-EecCCceEEEEEeeHhhhhhhhhHHHHHHHHHHHHhcCCCcEEEEEEEEccCCeEEEEE
Confidence            38899999999999999999 567889999998765422111   11111122233445667777777777788999999


Q ss_pred             EecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeeccCCCCCcccCC
Q 018699          126 DYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSGPWQDQG  205 (351)
Q Consensus       126 e~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~~~~~~~~~~  205 (351)
                      ||+++++|.+.+....  +..+++..+..++.|++.|+.|||+.||+||||||+||+++                 .++.
T Consensus        80 e~~~~g~L~~~~~~~~--~~~~~~~~~~~~~~qi~~~l~~lH~~~iiH~dikp~Nill~-----------------~~~~  140 (285)
T cd05631          80 TIMNGGDLKFHIYNMG--NPGFDEQRAIFYAAELCCGLEDLQRERIVYRDLKPENILLD-----------------DRGH  140 (285)
T ss_pred             EecCCCcHHHHHHhhC--CCCCCHHHHHHHHHHHHHHHHHHHhCCEEeCCCCHHHEEEC-----------------CCCC
Confidence            9999999998876532  34689999999999999999999999999999999999998                 6778


Q ss_pred             eEEeecCCccccccCCCCccccccccCCCcccceeccCCCCCccchHhHHHHHHHHHHhCccccccccCCCC----Ccee
Q 018699          206 LCLVDWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQEKKPWKFQVDTYGLCAIVHMMLHNSYMEIEKKASPD----GGLV  281 (351)
Q Consensus       206 ~~l~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~p~~~~~~~~~----~~~~  281 (351)
                      ++|+|||++....   .........|++.|+|||++.+..++.++|||||||++|+|++|..||........    ....
T Consensus       141 ~kl~Dfg~~~~~~---~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~~~~~~  217 (285)
T cd05631         141 IRISDLGLAVQIP---EGETVRGRVGTVGYMAPEVINNEKYTFSPDWWGLGCLIYEMIQGQSPFRKRKERVKREEVDRRV  217 (285)
T ss_pred             EEEeeCCCcEEcC---CCCeecCCCCCCCccCHhhhcCCCCCcccCchhHHHHHHHHHhCCCCCCCCCcchhHHHHHHHh
Confidence            9999999986432   22233455789999999999999999999999999999999999999976443211    0001


Q ss_pred             eecCcchhhhhHHHHHHHHHHHHhcCCCCCChH-----HHHHHHHHHHH
Q 018699          282 YLPKLSFKRYWKVELWKSLFTNLLNMSSGNDKE-----VLQNLQKSFQD  325 (351)
Q Consensus       282 ~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~s-----~~e~l~~~~~~  325 (351)
                      ......++...+ ..+.+||.+||+.||.+||+     ++++++|||..
T Consensus       218 ~~~~~~~~~~~s-~~~~~li~~~l~~~P~~R~~~~~~~~~~~~~h~~~~  265 (285)
T cd05631         218 KEDQEEYSEKFS-EDAKSICRMLLTKNPKERLGCRGNGAAGVKQHPIFK  265 (285)
T ss_pred             hcccccCCccCC-HHHHHHHHHHhhcCHHHhcCCCCCCHHHHhcCHhhc
Confidence            122233344445 78999999999999999997     89999998743

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i

>KOG4717 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=6.9e-43  Score=311.94  Aligned_cols=252  Identities=17%  Similarity=0.162  Sum_probs=225.7

Q ss_pred             eeEEEEEEeeccCceEEEEEEecCCCCceEEEEecCCCCChHHHH--HHHHHhhhccccccccccceeeecccCeeEEEE
Q 018699           48 KKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFPWEFYM--YRQLDQRISGRERSSFGFAHRIHLYSDYSILVC  125 (351)
Q Consensus        48 ~~Y~i~~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~~~e~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~  125 (351)
                      +-|.+.+.||+|.|++|-+|+ +--+|+.||||++.+....+...  +.+..+......|++++.+..+......+|+|+
T Consensus        18 GLYDLekTlG~GHFAVVKLAr-HVFTGekVAVKviDKTKlD~~st~hlfqEVRCMKLVQHpNiVRLYEViDTQTKlyLiL   96 (864)
T KOG4717|consen   18 GLYDLEKTLGRGHFAVVKLAR-HVFTGEKVAVKVIDKTKLDTLSTGHLFQEVRCMKLVQHPNIVRLYEVIDTQTKLYLIL   96 (864)
T ss_pred             eeehhhhhhcCCceehhhhhh-hhcccceeEEEEecccccchhhhhHHHHHHHHHHHhcCcCeeeeeehhcccceEEEEE
Confidence            469999999999999999999 57889999999999876654322  222223344557889999999999999999999


Q ss_pred             EecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeeccCCCCCcccCC
Q 018699          126 DYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSGPWQDQG  205 (351)
Q Consensus       126 e~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~~~~~~~~~~  205 (351)
                      |+-.+|+|.++|-++   ...+.+..+..++.||+.|+.|+|...||||||||+|+++..                .-|.
T Consensus        97 ELGD~GDl~DyImKH---e~Gl~E~La~kYF~QI~~AI~YCHqLHVVHRDLKPENVVFFE----------------KlGl  157 (864)
T KOG4717|consen   97 ELGDGGDLFDYIMKH---EEGLNEDLAKKYFAQIVHAISYCHQLHVVHRDLKPENVVFFE----------------KLGL  157 (864)
T ss_pred             EecCCchHHHHHHhh---hccccHHHHHHHHHHHHHHHHHHhhhhhhcccCCcceeEEee----------------ecCc
Confidence            999999999999887   467999999999999999999999999999999999999984                5688


Q ss_pred             eEEeecCCccccccCCCCccccccccCCCcccceeccCCCCC-ccchHhHHHHHHHHHHhCccccccccCCCCCceeeec
Q 018699          206 LCLVDWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQEKKPWK-FQVDTYGLCAIVHMMLHNSYMEIEKKASPDGGLVYLP  284 (351)
Q Consensus       206 ~~l~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~-~~~DiwslG~il~~l~~g~~p~~~~~~~~~~~~~~~~  284 (351)
                      +||+|||++   +.+.++....+.||+..|-|||++.|..|+ +++||||||||+|.|.+|++||...+..+...+++..
T Consensus       158 VKLTDFGFS---Nkf~PG~kL~TsCGSLAYSAPEILLGDsYDAPAVDiWSLGVILyMLVCGq~PFqeANDSETLTmImDC  234 (864)
T KOG4717|consen  158 VKLTDFGFS---NKFQPGKKLTTSCGSLAYSAPEILLGDSYDAPAVDIWSLGVILYMLVCGQPPFQEANDSETLTMIMDC  234 (864)
T ss_pred             eEeeecccc---ccCCCcchhhcccchhhccCchhhhcCccCCcchhhhHHHHHHHHHHhCCCccccccchhhhhhhhcc
Confidence            999999998   456778889999999999999999999998 8999999999999999999999999988888888999


Q ss_pred             CcchhhhhHHHHHHHHHHHHhcCCCCCChHHHHHHHHHH
Q 018699          285 KLSFKRYWKVELWKSLFTNLLNMSSGNDKEVLQNLQKSF  323 (351)
Q Consensus       285 ~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~~~~  323 (351)
                      +...|...+ .++++||.+||..||.+|.+.+++..++|
T Consensus       235 KYtvPshvS-~eCrdLI~sMLvRdPkkRAslEeI~s~~W  272 (864)
T KOG4717|consen  235 KYTVPSHVS-KECRDLIQSMLVRDPKKRASLEEIVSTSW  272 (864)
T ss_pred             cccCchhhh-HHHHHHHHHHHhcCchhhccHHHHhcccc
Confidence            999999988 99999999999999999999999999887

>KOG0659 consensus Cdk activating kinase (CAK)/RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH/TFIIK, kinase subunit CDK7 [Cell cycle control, cell division, chromosome partitioning; Transcription; Replication, recombination and repair]

Probab=100.00  E-value=5.8e-43  Score=289.04  Aligned_cols=252  Identities=18%  Similarity=0.179  Sum_probs=198.8

Q ss_pred             eeEEEEEEeeccCceEEEEEEecCCCCceEEEEecCCCCCh---HHHHHHHHHhhhccccccccccceeeecccCeeEEE
Q 018699           48 KKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFPW---EFYMYRQLDQRISGRERSSFGFAHRIHLYSDYSILV  124 (351)
Q Consensus        48 ~~Y~i~~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~~~---e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv  124 (351)
                      .+|...+.||+|.||+||+|+ +..+|+.||||+++.....   ....++++.- +....|+++....+++...+.+-+|
T Consensus         2 ~rY~~~~~lGEG~~gvVyka~-d~~t~~~VAIKKIkl~~~kdGi~~talREIK~-Lqel~h~nIi~LiD~F~~~~~l~lV   79 (318)
T KOG0659|consen    2 DRYEKLEKLGEGTYGVVYKAR-DTETGKRVAIKKIKLGNAKDGINRTALREIKL-LQELKHPNIIELIDVFPHKSNLSLV   79 (318)
T ss_pred             chhhhhhhhcCcceEEEEEEE-ecCCCcEEEEEEeeccccccCccHHHHHHHHH-HHHccCcchhhhhhhccCCCceEEE
Confidence            478999999999999999999 6788999999998755332   3334444432 3445678888889999999999999


Q ss_pred             EEecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeeccCCCCCcccC
Q 018699          125 CDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSGPWQDQ  204 (351)
Q Consensus       125 ~e~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~~~~~~~~~  204 (351)
                      +||+ ..+|+..+...   +..++...+..++.+++.|++|||++.|+||||||+|++++                 ++|
T Consensus        80 fEfm-~tdLe~vIkd~---~i~l~pa~iK~y~~m~LkGl~y~H~~~IlHRDlKPnNLLis-----------------~~g  138 (318)
T KOG0659|consen   80 FEFM-PTDLEVVIKDK---NIILSPADIKSYMLMTLKGLAYCHSKWILHRDLKPNNLLIS-----------------SDG  138 (318)
T ss_pred             EEec-cccHHHHhccc---ccccCHHHHHHHHHHHHHHHHHHHhhhhhcccCCccceEEc-----------------CCC
Confidence            9999 56999999876   57899999999999999999999999999999999999999                 899


Q ss_pred             CeEEeecCCccccccCCCCccccccccCCCcccceeccC-CCCCccchHhHHHHHHHHHHhCccccccccCCCCCce---
Q 018699          205 GLCLVDWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQEK-KPWKFQVDTYGLCAIVHMMLHNSYMEIEKKASPDGGL---  280 (351)
Q Consensus       205 ~~~l~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~~DiwslG~il~~l~~g~~p~~~~~~~~~~~~---  280 (351)
                      .+||+|||+|+....  ++......+-|..|+|||++.| ..|+..+|+||.|||+.||+-|.+.|...+..+....   
T Consensus       139 ~lKiADFGLAr~f~~--p~~~~~~~V~TRWYRAPELLfGsr~Yg~~VDmWavGCI~AELllr~P~fpG~sDidQL~~If~  216 (318)
T KOG0659|consen  139 QLKIADFGLARFFGS--PNRIQTHQVVTRWYRAPELLFGSRQYGTGVDMWAVGCIFAELLLRVPFFPGDSDIDQLSKIFR  216 (318)
T ss_pred             cEEeecccchhccCC--CCcccccceeeeeccChHHhccchhcCCcchhhhHHHHHHHHHccCCCCCCCchHHHHHHHHH
Confidence            999999999986442  2333333478999999999866 6789999999999999999999877655443311000   


Q ss_pred             ----------------------eeecCcchhhhhH--HHHHHHHHHHHhcCCCCCChHHHHHHHHHHH
Q 018699          281 ----------------------VYLPKLSFKRYWK--VELWKSLFTNLLNMSSGNDKEVLQNLQKSFQ  324 (351)
Q Consensus       281 ----------------------~~~~~~~~~~~~~--~~~~~~li~~~L~~dP~~R~s~~e~l~~~~~  324 (351)
                                            ...+..+....++  ++.+.||+.+||.+||.+|+++.|+|.|++.
T Consensus       217 ~LGTP~~~~WP~~~~lpdY~~~~~~P~~~~~~lf~aas~d~ldLl~~m~~ynP~~Rita~qaL~~~yf  284 (318)
T KOG0659|consen  217 ALGTPTPDQWPEMTSLPDYVKIQQFPKPPLNNLFPAASSDALDLLSKMLTYNPKKRITASQALKHPYF  284 (318)
T ss_pred             HcCCCCcccCccccccccHHHHhcCCCCccccccccccHHHHHHHHhhhccCchhcccHHHHhcchhh
Confidence                                  0011111111111  1667999999999999999999999998753

>KOG2345 consensus Serine/threonine protein kinase/TGF-beta stimulated factor [Transcription; Lipid transport and metabolism; Signal transduction mechanisms]

Probab=100.00  E-value=4.6e-42  Score=281.06  Aligned_cols=259  Identities=19%  Similarity=0.221  Sum_probs=200.9

Q ss_pred             cceEEEEcCeeEEEEEEeeccCceEEEEEEecCCCCceEEEEecCCCCChHH-HHHHHHHhhhccccccccccceeeec-
Q 018699           39 RNKTIEIGGKKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFPWEF-YMYRQLDQRISGRERSSFGFAHRIHL-  116 (351)
Q Consensus        39 ~~~~~~i~~~~Y~i~~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~~~e~-~~~~~~~~~~~~~~~~~~~~~~~~~~-  116 (351)
                      ++.++.|+++||+|.+.||.|||+-||+++ .-.+++.+|+|.+......+. ..++++.. .....++++....+... 
T Consensus        12 ~~~tv~In~~Ryri~~~LgeGGfsfv~LV~-~~s~~~~YAlKkI~c~~~~~~e~~~rEid~-~rkf~s~~vl~l~dh~l~   89 (302)
T KOG2345|consen   12 RRGTVIINNKRYRIQRLLGEGGFSFVDLVK-GLSTGHLYALKKILCHSQEDIEEALREIDN-HRKFNSPNVLRLVDHQLR   89 (302)
T ss_pred             CCCcEEEcCceEEEeeeecCCCceeeeeec-ccCcccchhhheeeccchHHHHHHHHHHHH-HHhhCCcchHHHHHHHHH
Confidence            367889999999999999999999999999 678899999999887663333 33333332 23334455444333221 


Q ss_pred             ----ccCeeEEEEEecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCC--ceecCCCCCcEEEeecCCcc
Q 018699          117 ----YSDYSILVCDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVG--IIHGDFKPDNLLIRYARDEL  190 (351)
Q Consensus       117 ----~~~~~~lv~e~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~--i~H~dl~p~Nill~~~~~~~  190 (351)
                          .....|++++|+..|+|.+.++.....+..+++..+..|+.+++.||.+||+..  .+|+||||.||++.      
T Consensus        90 ~~~D~~~~~yll~Pyy~~Gsl~d~i~~~k~kg~~~sE~~iL~if~gic~gL~~lH~~~~~yAH~DiKP~NILls------  163 (302)
T KOG2345|consen   90 EEKDGKHEAYLLLPYYKRGSLLDEIERLKIKGNFVSEAQILWIFLGICRGLEALHEKEPPYAHRDIKPANILLS------  163 (302)
T ss_pred             hhccCceeEEEEeehhccccHHHHHHHHhhcCCccCHHHHHHHHHHHHHHHHHHhccCCcccccCCCcceeEec------
Confidence                234689999999999999999988776778999999999999999999999998  99999999999999      


Q ss_pred             eeeccCCCCCcccCCeEEeecCCccccccCCCCcc-------ccccccCCCcccceecc---CCCCCccchHhHHHHHHH
Q 018699          191 TVLDHDRSGPWQDQGLCLVDWGRGIDLHLFPDNME-------FEGDCRTSGFRCIEMQE---KKPWKFQVDTYGLCAIVH  260 (351)
Q Consensus       191 ~~~~~~~~~~~~~~~~~l~Dfg~a~~~~~~~~~~~-------~~~~~g~~~y~aPE~~~---~~~~~~~~DiwslG~il~  260 (351)
                                 ..+.++|.|||.+........++.       ......|..|+|||++.   +...+.++|||||||++|
T Consensus       164 -----------~~~~~vl~D~GS~~~a~i~i~~~~~a~~lQe~a~e~Ct~pyRAPELf~vk~~~ti~ertDIWSLGCtLY  232 (302)
T KOG2345|consen  164 -----------DSGLPVLMDLGSATQAPIQIEGSRQALRLQEWAEERCTIPYRAPELFNVKSHCTITERTDIWSLGCTLY  232 (302)
T ss_pred             -----------CCCceEEEeccCccccceEeechHHHHHHHHHHHHhCCCcccCchheecccCcccccccchhhhhHHHH
Confidence                       667799999998865443333221       12234688899999984   456689999999999999


Q ss_pred             HHHhCccccccccCC--------CCCceeeecCcchhhhhHHHHHHHHHHHHhcCCCCCChHHHHHHHH
Q 018699          261 MMLHNSYMEIEKKAS--------PDGGLVYLPKLSFKRYWKVELWKSLFTNLLNMSSGNDKEVLQNLQK  321 (351)
Q Consensus       261 ~l~~g~~p~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~~  321 (351)
                      .|+.|..||......        ..+++.++....    ++ +.+..||+.||++||.+||++.+++.+
T Consensus       233 a~mf~~sPfe~~~~~GgSlaLAv~n~q~s~P~~~~----ys-e~l~~lik~mlqvdP~qRP~i~~ll~~  296 (302)
T KOG2345|consen  233 AMMFGESPFERIYQQGGSLALAVQNAQISIPNSSR----YS-EALHQLIKSMLQVDPNQRPTIPELLSK  296 (302)
T ss_pred             HHHHcCCcchHHhhcCCeEEEeeeccccccCCCCC----cc-HHHHHHHHHHhcCCcccCCCHHHHHHH
Confidence            999999999765442        012222222222    33 889999999999999999999999875

>KOG0667 consensus Dual-specificity tyrosine-phosphorylation regulated kinase [General function prediction only]

Probab=100.00  E-value=8.2e-43  Score=321.30  Aligned_cols=253  Identities=19%  Similarity=0.267  Sum_probs=196.7

Q ss_pred             eeEEEEEEeeccCceEEEEEEecCCCCceEEEEecCCCCC--h----HHHHHHHHHhhhccccccccccceeeecccCee
Q 018699           48 KKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFP--W----EFYMYRQLDQRISGRERSSFGFAHRIHLYSDYS  121 (351)
Q Consensus        48 ~~Y~i~~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~~--~----e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  121 (351)
                      .+|+|.+.||+|+||.|.+|+ +..+++.||||+++....  .    |..++..+.+ .......+++...+++...+++
T Consensus       186 ~rY~V~e~LGkGtFGQVvk~~-d~~T~e~VAIKIiKN~k~f~~Q~~~Ei~iL~~ln~-~d~~~~~n~Vrm~d~F~fr~Hl  263 (586)
T KOG0667|consen  186 YRYEVLEVLGKGSFGQVVKAY-DHKTGEIVAIKIIKNKKRFLRQAQIEIRILELLNK-HDPDDKYNIVRMLDYFYFRNHL  263 (586)
T ss_pred             EEEEEEEEecccccceeEEEE-ecCCCcEEEEEeeccChHHHHHHHHHHHHHHHHhc-cCCCCCeeEEEeeeccccccce
Confidence            599999999999999999999 789999999999985422  2    3333333332 1233445678888888999999


Q ss_pred             EEEEEecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeeccCCCCCc
Q 018699          122 ILVCDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSGPW  201 (351)
Q Consensus       122 ~lv~e~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~~~~~~  201 (351)
                      |+|+|.+ +.+|+++++....  ..++...++.++.||+.||.+||+.||||+||||+||||...               
T Consensus       264 ciVfELL-~~NLYellK~n~f--~Glsl~~ir~~~~Qil~~L~~L~~l~IIHcDLKPENILL~~~---------------  325 (586)
T KOG0667|consen  264 CIVFELL-STNLYELLKNNKF--RGLSLPLVRKFAQQILTALLFLHELGIIHCDLKPENILLKDP---------------  325 (586)
T ss_pred             eeeehhh-hhhHHHHHHhcCC--CCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCChhheeeccC---------------
Confidence            9999999 7799999998542  358889999999999999999999999999999999999843               


Q ss_pred             ccCCeEEeecCCccccccCCCCccccccccCCCcccceeccCCCCCccchHhHHHHHHHHHHhCccccccccCCC-----
Q 018699          202 QDQGLCLVDWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQEKKPWKFQVDTYGLCAIVHMMLHNSYMEIEKKASP-----  276 (351)
Q Consensus       202 ~~~~~~l~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~p~~~~~~~~-----  276 (351)
                      ....+||+|||.+...     .....+.+.+..|+|||++.|.+|+.+.||||||||++||++|.+.|...++.+     
T Consensus       326 ~r~~vKVIDFGSSc~~-----~q~vytYiQSRfYRAPEVILGlpY~~~IDmWSLGCIlAEL~tG~PLfpG~ne~DQl~~I  400 (586)
T KOG0667|consen  326 KRSRIKVIDFGSSCFE-----SQRVYTYIQSRFYRAPEVILGLPYDTAIDMWSLGCILAELFTGEPLFPGDNEYDQLARI  400 (586)
T ss_pred             CcCceeEEeccccccc-----CCcceeeeeccccccchhhccCCCCCccceeehhhhHHhHhcCccccCCCCHHHHHHHH
Confidence            3447999999988643     333447788999999999999999999999999999999999986654322210     


Q ss_pred             -------------------------CCcee----ee------------------cCcchh---hh-------hHHHHHHH
Q 018699          277 -------------------------DGGLV----YL------------------PKLSFK---RY-------WKVELWKS  299 (351)
Q Consensus       277 -------------------------~~~~~----~~------------------~~~~~~---~~-------~~~~~~~~  299 (351)
                                               .+...    ..                  .....|   +.       .....+.+
T Consensus       401 ~e~lG~Pp~~mL~~~~~~~kff~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~P~~~~~l~~~~~~~~~~~F~d  480 (586)
T KOG0667|consen  401 IEVLGLPPPKMLDTAKKAHKFFTSLKGFPRLCVETSAPRGTKSPEVRKYYRKARLERRGPPGSRSLESGLPKADDKLFID  480 (586)
T ss_pred             HHHhCCCCHHHHHhccccceehhccCCceeeeeeecccccccchhhhhhhhhhcccccCCCCCcccchhcccccHHHHHH
Confidence                                     00000    00                  000011   11       11266899


Q ss_pred             HHHHHhcCCCCCChHHHHHHHHHHHH
Q 018699          300 LFTNLLNMSSGNDKEVLQNLQKSFQD  325 (351)
Q Consensus       300 li~~~L~~dP~~R~s~~e~l~~~~~~  325 (351)
                      ||.+||..||.+|+|+.|+|+|||..
T Consensus       481 flk~~L~~dP~~R~tp~qal~Hpfl~  506 (586)
T KOG0667|consen  481 FLKRCLEWDPAERITPAQALNHPFLT  506 (586)
T ss_pred             HHHHHhccCchhcCCHHHHhcCcccc
Confidence            99999999999999999999999855

>cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma

Probab=100.00  E-value=1.2e-42  Score=315.99  Aligned_cols=246  Identities=20%  Similarity=0.237  Sum_probs=194.0

Q ss_pred             EEeeccCceEEEEEEecCCCCceEEEEecCCCCCh---HHHHHHHHHhhhccccccccccceeeecccCeeEEEEEecCC
Q 018699           54 GCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFPW---EFYMYRQLDQRISGRERSSFGFAHRIHLYSDYSILVCDYLSQ  130 (351)
Q Consensus        54 ~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~~~---e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~  130 (351)
                      +.||+|+||.||+|+ +..+++.||+|++.+....   +..........+....|++++.....+...+..|+||||+++
T Consensus         1 ~~lG~G~~g~Vy~~~-~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~Ey~~~   79 (328)
T cd05593           1 KLLGKGTFGKVILVR-EKASGKYYAMKILKKEVIIAKDEVAHTLTESRVLKNTRHPFLTSLKYSFQTKDRLCFVMEYVNG   79 (328)
T ss_pred             CeeeeCCCEEEEEEE-ECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEcCCEEEEEEeCCCC
Confidence            468999999999999 5778899999998754221   111111122334455678888887888888999999999999


Q ss_pred             CCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeeccCCCCCcccCCeEEee
Q 018699          131 GTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSGPWQDQGLCLVD  210 (351)
Q Consensus       131 ~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~~~~~~~~~~~~l~D  210 (351)
                      ++|...+..    ...+++..++.++.||+.||+|||++||+||||||+||+++                 .++.++|+|
T Consensus        80 g~L~~~l~~----~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDikp~NIll~-----------------~~~~~kL~D  138 (328)
T cd05593          80 GELFFHLSR----ERVFSEDRTRFYGAEIVSALDYLHSGKIVYRDLKLENLMLD-----------------KDGHIKITD  138 (328)
T ss_pred             CCHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHhCCeEecccCHHHeEEC-----------------CCCcEEEec
Confidence            999988876    46799999999999999999999999999999999999999                 678899999


Q ss_pred             cCCccccccCCCCccccccccCCCcccceeccCCCCCccchHhHHHHHHHHHHhCccccccccCCCCCceeeecCcchhh
Q 018699          211 WGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQEKKPWKFQVDTYGLCAIVHMMLHNSYMEIEKKASPDGGLVYLPKLSFKR  290 (351)
Q Consensus       211 fg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~  290 (351)
                      ||++....  ..........|++.|+|||++.+..++.++|||||||++|+|++|..||..................+|.
T Consensus       139 fG~~~~~~--~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~Pf~~~~~~~~~~~~~~~~~~~p~  216 (328)
T cd05593         139 FGLCKEGI--TDAATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEDIKFPR  216 (328)
T ss_pred             CcCCccCC--CcccccccccCCcCccChhhhcCCCCCccCCccccchHHHHHhhCCCCCCCCCHHHHHHHhccCCccCCC
Confidence            99886421  1122234457899999999999888999999999999999999999999754432111112223334444


Q ss_pred             hhHHHHHHHHHHHHhcCCCCCCh-----HHHHHHHHHHH
Q 018699          291 YWKVELWKSLFTNLLNMSSGNDK-----EVLQNLQKSFQ  324 (351)
Q Consensus       291 ~~~~~~~~~li~~~L~~dP~~R~-----s~~e~l~~~~~  324 (351)
                      ..+ ..+.+||.+||++||++|+     ++.++++|+|.
T Consensus       217 ~~~-~~~~~li~~~L~~dP~~R~~~~~~~~~~il~h~~~  254 (328)
T cd05593         217 TLS-ADAKSLLSGLLIKDPNKRLGGGPDDAKEIMRHSFF  254 (328)
T ss_pred             CCC-HHHHHHHHHHcCCCHHHcCCCCCCCHHHHhcCCCc
Confidence            455 7899999999999999997     89999999763

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate

>cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta

Probab=100.00  E-value=1.1e-42  Score=315.80  Aligned_cols=246  Identities=19%  Similarity=0.234  Sum_probs=194.1

Q ss_pred             EEeeccCceEEEEEEecCCCCceEEEEecCCCCC---hHHHHHHHHHhhhccccccccccceeeecccCeeEEEEEecCC
Q 018699           54 GCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFP---WEFYMYRQLDQRISGRERSSFGFAHRIHLYSDYSILVCDYLSQ  130 (351)
Q Consensus        54 ~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~~---~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~  130 (351)
                      +.||+|+||.||+|+ +..+|+.||+|++.....   .+..........+....|++++.....+...+..|+||||+++
T Consensus         1 ~~lG~G~~g~Vy~~~-~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~i~~~~~~~~~~~~~~lv~E~~~~   79 (323)
T cd05595           1 KLLGKGTFGKVILVR-EKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANG   79 (323)
T ss_pred             CeeeeCCCEEEEEEE-ECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCcceeeEEecCCEEEEEEeCCCC
Confidence            469999999999999 567889999999875421   1112222222334455678888888888888899999999999


Q ss_pred             CCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeeccCCCCCcccCCeEEee
Q 018699          131 GTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSGPWQDQGLCLVD  210 (351)
Q Consensus       131 ~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~~~~~~~~~~~~l~D  210 (351)
                      ++|..++..    +..+++..++.++.||+.||.|||++||+||||||+||+++                 .++.++|+|
T Consensus        80 ~~L~~~l~~----~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~Dlkp~NIll~-----------------~~~~~kL~D  138 (323)
T cd05595          80 GELFFHLSR----ERVFTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLMLD-----------------KDGHIKITD  138 (323)
T ss_pred             CcHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHEEEc-----------------CCCCEEecc
Confidence            999988876    46799999999999999999999999999999999999999                 677899999


Q ss_pred             cCCccccccCCCCccccccccCCCcccceeccCCCCCccchHhHHHHHHHHHHhCccccccccCCCCCceeeecCcchhh
Q 018699          211 WGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQEKKPWKFQVDTYGLCAIVHMMLHNSYMEIEKKASPDGGLVYLPKLSFKR  290 (351)
Q Consensus       211 fg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~  290 (351)
                      ||++....  ..........|++.|+|||++.+..++.++|||||||++|+|++|..||..................++.
T Consensus       139 fg~~~~~~--~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~~~~~~~~~~~~~~~~~~p~  216 (323)
T cd05595         139 FGLCKEGI--SDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFPR  216 (323)
T ss_pred             cHHhcccc--CCCCccccccCCcCcCCcccccCCCCCchhchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCCCCCC
Confidence            99875321  1222234457899999999999888999999999999999999999999755432111111122233444


Q ss_pred             hhHHHHHHHHHHHHhcCCCCCCh-----HHHHHHHHHHH
Q 018699          291 YWKVELWKSLFTNLLNMSSGNDK-----EVLQNLQKSFQ  324 (351)
Q Consensus       291 ~~~~~~~~~li~~~L~~dP~~R~-----s~~e~l~~~~~  324 (351)
                      .++ +.+++||.+||+.||.+|+     ++.+++.|+|.
T Consensus       217 ~~~-~~~~~li~~~L~~dP~~R~~~~~~~~~~~l~h~~~  254 (323)
T cd05595         217 TLS-PEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRFF  254 (323)
T ss_pred             CCC-HHHHHHHHHHccCCHHHhCCCCCCCHHHHHcCCCc
Confidence            455 8899999999999999998     89999999863

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in

>cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta

Probab=100.00  E-value=1.6e-42  Score=314.29  Aligned_cols=247  Identities=17%  Similarity=0.176  Sum_probs=192.7

Q ss_pred             EEeeccCceEEEEEEecCCCCceEEEEecCCCCC---hHHH-HHHHHHhhhccccccccccceeeecccCeeEEEEEecC
Q 018699           54 GCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFP---WEFY-MYRQLDQRISGRERSSFGFAHRIHLYSDYSILVCDYLS  129 (351)
Q Consensus        54 ~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~~---~e~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~  129 (351)
                      +.||+|+||+||+|+ +..+++.||+|++.+...   .... ...+.........|++++.....+...+.+|+||||++
T Consensus         1 ~~lg~G~~g~V~~~~-~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~iv~~~~~~~~~~~~~iv~Ey~~   79 (320)
T cd05590           1 RVLGKGSFGKVMLAR-LKESGRLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLYCCFQTPDRLFFVMEFVN   79 (320)
T ss_pred             CeeeeCCCeEEEEEE-EcCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhccCCCchhceeeEEEcCCEEEEEEcCCC
Confidence            469999999999999 567789999999875321   1111 11111111122357788888888888899999999999


Q ss_pred             CCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeeccCCCCCcccCCeEEe
Q 018699          130 QGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSGPWQDQGLCLV  209 (351)
Q Consensus       130 ~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~~~~~~~~~~~~l~  209 (351)
                      +++|.+++..    ...+++..++.++.|++.||.|||++||+||||||+||+++                 .++.++|+
T Consensus        80 ~g~L~~~i~~----~~~l~~~~~~~~~~ql~~~L~~lH~~~ivH~dlkp~NIli~-----------------~~~~~kL~  138 (320)
T cd05590          80 GGDLMFHIQK----SRRFDEARARFYAAEITSALMFLHDKGIIYRDLKLDNVLLD-----------------HEGHCKLA  138 (320)
T ss_pred             CchHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCCHHHeEEC-----------------CCCcEEEe
Confidence            9999998877    46799999999999999999999999999999999999999                 77889999


Q ss_pred             ecCCccccccCCCCccccccccCCCcccceeccCCCCCccchHhHHHHHHHHHHhCccccccccCCCCCceeeecCcchh
Q 018699          210 DWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQEKKPWKFQVDTYGLCAIVHMMLHNSYMEIEKKASPDGGLVYLPKLSFK  289 (351)
Q Consensus       210 Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~  289 (351)
                      |||++....  ..........|++.|+|||++.+..++.++|||||||++|+|++|..||...+...............+
T Consensus       139 DfG~~~~~~--~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~i~~~~~~~~  216 (320)
T cd05590         139 DFGMCKEGI--FNGKTTSTFCGTPDYIAPEILQEMLYGPSVDWWAMGVLLYEMLCGHAPFEAENEDDLFEAILNDEVVYP  216 (320)
T ss_pred             eCCCCeecC--cCCCcccccccCccccCHHHHcCCCCCCccchhhhHHHHHHHhhCCCCCCCCCHHHHHHHHhcCCCCCC
Confidence            999876422  112223445789999999999988899999999999999999999999976543211111122223334


Q ss_pred             hhhHHHHHHHHHHHHhcCCCCCChHH------HHHHHHHHHH
Q 018699          290 RYWKVELWKSLFTNLLNMSSGNDKEV------LQNLQKSFQD  325 (351)
Q Consensus       290 ~~~~~~~~~~li~~~L~~dP~~R~s~------~e~l~~~~~~  325 (351)
                      ...+ +.+.+||.+||+.||.+|+++      .+++.|+|..
T Consensus       217 ~~~~-~~~~~li~~~L~~dP~~R~~~~~~~~~~~~~~h~~f~  257 (320)
T cd05590         217 TWLS-QDAVDILKAFMTKNPTMRLGSLTLGGEEAILRHPFFK  257 (320)
T ss_pred             CCCC-HHHHHHHHHHcccCHHHCCCCCCCCCHHHHHcCCCcC
Confidence            4444 889999999999999999998      8899998743

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal

>cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta

Probab=100.00  E-value=1.3e-42  Score=315.22  Aligned_cols=251  Identities=18%  Similarity=0.203  Sum_probs=193.9

Q ss_pred             eEEEEEEeeccCceEEEEEEecCCCCceEEEEecCCCCChH---HH-HHHHHHhhhccccccccccceeeecccCeeEEE
Q 018699           49 KYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFPWE---FY-MYRQLDQRISGRERSSFGFAHRIHLYSDYSILV  124 (351)
Q Consensus        49 ~Y~i~~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~~~e---~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv  124 (351)
                      +|++.+.||+|+||.||+|+ +..+++.||+|++.+.....   .. ...+.........++++......+...+..|+|
T Consensus         1 df~~~~~lg~G~~g~Vy~~~-~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv   79 (323)
T cd05616           1 DFNFLMVLGKGSFGKVMLAE-RKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALSGKPPFLTQLHSCFQTMDRLYFV   79 (323)
T ss_pred             CceEEEEEeeCCCeEEEEEE-ECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCeEeeEEEEEecCCEEEEE
Confidence            48999999999999999999 56788999999987542211   11 111111111223456666677777778899999


Q ss_pred             EEecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeeccCCCCCcccC
Q 018699          125 CDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSGPWQDQ  204 (351)
Q Consensus       125 ~e~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~~~~~~~~~  204 (351)
                      |||+++|+|.+.+..    ...+++..+..++.|++.||.|||++||+||||||+||+++                 .++
T Consensus        80 ~E~~~~g~L~~~~~~----~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~Nill~-----------------~~~  138 (323)
T cd05616          80 MEYVNGGDLMYQIQQ----VGRFKEPHAVFYAAEIAIGLFFLHSKGIIYRDLKLDNVMLD-----------------SEG  138 (323)
T ss_pred             EcCCCCCCHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHCCEEecCCCHHHeEEC-----------------CCC
Confidence            999999999998876    46789999999999999999999999999999999999999                 778


Q ss_pred             CeEEeecCCccccccCCCCccccccccCCCcccceeccCCCCCccchHhHHHHHHHHHHhCccccccccCCCCCceeeec
Q 018699          205 GLCLVDWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQEKKPWKFQVDTYGLCAIVHMMLHNSYMEIEKKASPDGGLVYLP  284 (351)
Q Consensus       205 ~~~l~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~p~~~~~~~~~~~~~~~~  284 (351)
                      .++|+|||++....  ..........||+.|+|||++.+..++.++|||||||++|+|++|..||...............
T Consensus       139 ~~kL~DfG~~~~~~--~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~Pf~~~~~~~~~~~i~~~  216 (323)
T cd05616         139 HIKIADFGMCKENM--WDGVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIMEH  216 (323)
T ss_pred             cEEEccCCCceecC--CCCCccccCCCChhhcCHHHhcCCCCCCccchhchhHHHHHHHhCCCCCCCCCHHHHHHHHHhC
Confidence            89999999886422  1122234457899999999999999999999999999999999999999765432111111122


Q ss_pred             CcchhhhhHHHHHHHHHHHHhcCCCCCChHH-----HHHHHHHHH
Q 018699          285 KLSFKRYWKVELWKSLFTNLLNMSSGNDKEV-----LQNLQKSFQ  324 (351)
Q Consensus       285 ~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~-----~e~l~~~~~  324 (351)
                      ...+|...+ ..+.++|.+||+.||++|+++     .+++.|+|.
T Consensus       217 ~~~~p~~~s-~~~~~li~~~l~~~p~~R~~~~~~~~~~i~~h~~~  260 (323)
T cd05616         217 NVAYPKSMS-KEAVAICKGLMTKHPGKRLGCGPEGERDIKEHAFF  260 (323)
T ss_pred             CCCCCCcCC-HHHHHHHHHHcccCHHhcCCCCCCCHHHHhcCCCc
Confidence            233344444 789999999999999999984     778888764

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and

>KOG0032 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]

Probab=100.00  E-value=3.8e-42  Score=313.15  Aligned_cols=259  Identities=19%  Similarity=0.188  Sum_probs=208.3

Q ss_pred             cCeeEEEEEEeeccCceEEEEEEecCCCCceEEEEecCCCCChHH---HHHHHHHhhhcccc-ccccccceeeecccCee
Q 018699           46 GGKKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFPWEF---YMYRQLDQRISGRE-RSSFGFAHRIHLYSDYS  121 (351)
Q Consensus        46 ~~~~Y~i~~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~~~e~---~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~  121 (351)
                      ....|++.+.||+|.||.||.|+ ...+|+.+|+|.+.+......   +........+.... |++++.+...+.....+
T Consensus        33 ~~~~Y~l~~~lG~G~Fg~v~~~~-~~~tg~~~A~K~i~k~~~~~~~~~~~v~~Ev~il~~l~~hpniv~l~~~~e~~~~~  111 (382)
T KOG0032|consen   33 IKEKYELGRELGRGQFGVVYLCR-EKSTGKEVACKVIPKRKLRGKEDREDVRREVAILQQLSGHPNIVQLKDAFEDPDSV  111 (382)
T ss_pred             ccccEEehhhhCCCCceEEEEEE-ecCCCceeEEEEeehhhccccccHHHHHHHHHHHHhccCCCCEEEEEEEEEcCCeE
Confidence            35789999999999999999999 677899999999886644211   11111112222222 88999999999999999


Q ss_pred             EEEEEecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeeccCCCCCc
Q 018699          122 ILVCDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSGPW  201 (351)
Q Consensus       122 ~lv~e~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~~~~~~  201 (351)
                      ++|||++.||.|.+.+...     .+++..+..++.|++.+++|||+.||+|+||||+|+++.....             
T Consensus       112 ~lvmEL~~GGeLfd~i~~~-----~~sE~da~~~~~~il~av~~lH~~gvvHrDlKpEN~L~~~~~~-------------  173 (382)
T KOG0032|consen  112 YLVMELCEGGELFDRIVKK-----HYSERDAAGIIRQILEAVKYLHSLGVVHRDLKPENLLLASKDE-------------  173 (382)
T ss_pred             EEEEEecCCchHHHHHHHc-----cCCHHHHHHHHHHHHHHHHHHHhCCceeccCCHHHeeeccccC-------------
Confidence            9999999999999999874     3999999999999999999999999999999999999996543             


Q ss_pred             ccCCeEEeecCCccccccCCCCccccccccCCCcccceeccCCCCCccchHhHHHHHHHHHHhCccccccccCCCCCcee
Q 018699          202 QDQGLCLVDWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQEKKPWKFQVDTYGLCAIVHMMLHNSYMEIEKKASPDGGLV  281 (351)
Q Consensus       202 ~~~~~~l~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~p~~~~~~~~~~~~~  281 (351)
                      .++.++++|||++.....   .......+||+.|+|||++.+.+|+..+||||+|+++|.|++|..||...+.......+
T Consensus       174 ~~~~ik~~DFGla~~~~~---~~~~~~~~Gtp~y~APEvl~~~~y~~~~DiWS~Gvi~yiLL~G~~PF~~~~~~~~~~~i  250 (382)
T KOG0032|consen  174 GSGRIKLIDFGLAKFIKP---GERLHTIVGTPEYVAPEVLGGRPYGDEVDVWSIGVILYILLSGVPPFWGETEFEIFLAI  250 (382)
T ss_pred             CCCcEEEeeCCCceEccC---CceEeeecCCccccCchhhcCCCCCcccchhHHHHHHHHHhhCCCCCcCCChhHHHHHH
Confidence            346799999999975432   55678889999999999999999999999999999999999999999987744221111


Q ss_pred             eecCcch-hhhhHH--HHHHHHHHHHhcCCCCCChHHHHHHHHHHHHH
Q 018699          282 YLPKLSF-KRYWKV--ELWKSLFTNLLNMSSGNDKEVLQNLQKSFQDY  326 (351)
Q Consensus       282 ~~~~~~~-~~~~~~--~~~~~li~~~L~~dP~~R~s~~e~l~~~~~~~  326 (351)
                      ......+ ...|.+  +.+++||++||..||.+|+++.++|+|||..-
T Consensus       251 ~~~~~~f~~~~w~~is~~akd~i~~ll~~dp~~R~ta~~~L~HpWi~~  298 (382)
T KOG0032|consen  251 LRGDFDFTSEPWDDISESAKDFIRKLLEFDPRKRLTAAQALQHPWIKS  298 (382)
T ss_pred             HcCCCCCCCCCccccCHHHHHHHHHhcccCcccCCCHHHHhcCccccC
Confidence            1111111 122221  88999999999999999999999999998543

>PTZ00283 serine/threonine protein kinase; Provisional

Probab=100.00  E-value=9.8e-42  Score=324.97  Aligned_cols=266  Identities=18%  Similarity=0.104  Sum_probs=199.5

Q ss_pred             EEEEcCeeEEEEEEeeccCceEEEEEEecCCCCceEEEEecCCCCChHHHHHH--HHHhhhccccccccccceeeeccc-
Q 018699           42 TIEIGGKKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFPWEFYMYR--QLDQRISGRERSSFGFAHRIHLYS-  118 (351)
Q Consensus        42 ~~~i~~~~Y~i~~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~~~e~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~-  118 (351)
                      +....+++|++.+.||+|+||+||+|+ +..+++.||||++......+.....  .....+....+++++..+..+... 
T Consensus        26 ~~~~~~~rY~i~~~LG~G~fG~Vy~a~-~~~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~~~h~~iv~~~~~~~~~~  104 (496)
T PTZ00283         26 TAKEQAKKYWISRVLGSGATGTVLCAK-RVSDGEPFAVKVVDMEGMSEADKNRAQAEVCCLLNCDFFSIVKCHEDFAKKD  104 (496)
T ss_pred             cccccCCCEEEEEEEecCCCEEEEEEE-EcCCCCEEEEEEEecccCCHHHHHHHHHHHHHHhcCCCCcEEEeecceeccc
Confidence            344557899999999999999999999 5677899999998765433322211  111223333445555444333211 


Q ss_pred             -------CeeEEEEEecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcce
Q 018699          119 -------DYSILVCDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELT  191 (351)
Q Consensus       119 -------~~~~lv~e~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~  191 (351)
                             ..+++||||+++|+|.+++......+..+++..++.++.|++.||.|||++||+||||||+||+++       
T Consensus       105 ~~~~~~~~~i~lV~Ey~~~gsL~~~l~~~~~~~~~l~e~~~~~i~~qll~aL~~lH~~~IiHrDLKP~NILl~-------  177 (496)
T PTZ00283        105 PRNPENVLMIALVLDYANAGDLRQEIKSRAKTNRTFREHEAGLLFIQVLLAVHHVHSKHMIHRDIKSANILLC-------  177 (496)
T ss_pred             ccCcccceEEEEEEeCCCCCcHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEe-------
Confidence                   146899999999999999986544456799999999999999999999999999999999999999       


Q ss_pred             eeccCCCCCcccCCeEEeecCCccccccCCCCccccccccCCCcccceeccCCCCCccchHhHHHHHHHHHHhCcccccc
Q 018699          192 VLDHDRSGPWQDQGLCLVDWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQEKKPWKFQVDTYGLCAIVHMMLHNSYMEIE  271 (351)
Q Consensus       192 ~~~~~~~~~~~~~~~~l~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~p~~~  271 (351)
                                .++.++|+|||++................||+.|+|||++.+..++.++|||||||++|+|++|..||..
T Consensus       178 ----------~~~~vkL~DFGls~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~s~k~DVwSlGvilyeLltG~~Pf~~  247 (496)
T PTZ00283        178 ----------SNGLVKLGDFGFSKMYAATVSDDVGRTFCGTPYYVAPEIWRRKPYSKKADMFSLGVLLYELLTLKRPFDG  247 (496)
T ss_pred             ----------CCCCEEEEecccCeeccccccccccccccCCcceeCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCC
Confidence                      7788999999998654322222223456789999999999999999999999999999999999999975


Q ss_pred             ccCCCCC-ceeeecCcchhhhhHHHHHHHHHHHHhcCCCCCChHHHHHHHHHHHHH
Q 018699          272 KKASPDG-GLVYLPKLSFKRYWKVELWKSLFTNLLNMSSGNDKEVLQNLQKSFQDY  326 (351)
Q Consensus       272 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~~~~~~~  326 (351)
                      ....... ........+++...+ +.+.++|.+||..||.+||++.+++.|||...
T Consensus       248 ~~~~~~~~~~~~~~~~~~~~~~~-~~l~~li~~~L~~dP~~RPs~~ell~~p~~~~  302 (496)
T PTZ00283        248 ENMEEVMHKTLAGRYDPLPPSIS-PEMQEIVTALLSSDPKRRPSSSKLLNMPICKL  302 (496)
T ss_pred             CCHHHHHHHHhcCCCCCCCCCCC-HHHHHHHHHHcccChhhCcCHHHHHhCHHHHH
Confidence            4321100 000111122333444 78999999999999999999999999987443

>PTZ00267 NIMA-related protein kinase; Provisional

Probab=100.00  E-value=1.7e-41  Score=322.98  Aligned_cols=262  Identities=17%  Similarity=0.130  Sum_probs=204.6

Q ss_pred             CeeEEEEEEeeccCceEEEEEEecCCCCceEEEEecCCCCChHHHHHHHHHhhhccccccccccceeeecccCeeEEEEE
Q 018699           47 GKKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFPWEFYMYRQLDQRISGRERSSFGFAHRIHLYSDYSILVCD  126 (351)
Q Consensus        47 ~~~Y~i~~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e  126 (351)
                      ...|.+.+.||+|++|.||+|......++.||+|.+...........+.....+....|++++.....+..++.+|+|||
T Consensus        66 ~~~y~~~~~lg~G~~g~vy~a~~~~~~~~~vv~K~~~~~~~~~~~~~~~E~~~l~~l~Hpniv~~~~~~~~~~~~~lv~E  145 (478)
T PTZ00267         66 EHMYVLTTLVGRNPTTAAFVATRGSDPKEKVVAKFVMLNDERQAAYARSELHCLAACDHFGIVKHFDDFKSDDKLLLIME  145 (478)
T ss_pred             ceeEEEEEEEEeCCCcEEEEEEEcCCCCeEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeEEEEEEEECCEEEEEEE
Confidence            34699999999999999999995434378899998765443333333333445566778899999988888999999999


Q ss_pred             ecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeeccCCCCCcccCCe
Q 018699          127 YLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSGPWQDQGL  206 (351)
Q Consensus       127 ~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~~~~~~~~~~~  206 (351)
                      |+++|+|.+++........++++..+..++.|++.||.|||++||+||||||+||+++                 .++.+
T Consensus       146 ~~~gg~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~ivHrDlkp~NIll~-----------------~~~~~  208 (478)
T PTZ00267        146 YGSGGDLNKQIKQRLKEHLPFQEYEVGLLFYQIVLALDEVHSRKMMHRDLKSANIFLM-----------------PTGII  208 (478)
T ss_pred             CCCCCCHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCEEECCcCHHhEEEC-----------------CCCcE
Confidence            9999999998876443356789999999999999999999999999999999999999                 77889


Q ss_pred             EEeecCCccccccCCCCccccccccCCCcccceeccCCCCCccchHhHHHHHHHHHHhCccccccccCCCCCc-eeeecC
Q 018699          207 CLVDWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQEKKPWKFQVDTYGLCAIVHMMLHNSYMEIEKKASPDGG-LVYLPK  285 (351)
Q Consensus       207 ~l~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~p~~~~~~~~~~~-~~~~~~  285 (351)
                      +|+|||++...............+||+.|+|||++.+..++.++|||||||++|+|++|..||.......... ......
T Consensus       209 kL~DFgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~Pf~~~~~~~~~~~~~~~~~  288 (478)
T PTZ00267        209 KLGDFGFSKQYSDSVSLDVASSFCGTPYYLAPELWERKRYSKKADMWSLGVILYELLTLHRPFKGPSQREIMQQVLYGKY  288 (478)
T ss_pred             EEEeCcCceecCCccccccccccCCCccccCHhHhCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCC
Confidence            9999999875432211122344578999999999998889999999999999999999999997543211000 001111


Q ss_pred             cchhhhhHHHHHHHHHHHHhcCCCCCChHHHHHHHHHHHHH
Q 018699          286 LSFKRYWKVELWKSLFTNLLNMSSGNDKEVLQNLQKSFQDY  326 (351)
Q Consensus       286 ~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~~~~~~~  326 (351)
                      .+.+..++ ..+++||.+||..||++||++.+++.++|...
T Consensus       289 ~~~~~~~s-~~~~~li~~~L~~dP~~Rps~~~~l~~~~~~~  328 (478)
T PTZ00267        289 DPFPCPVS-SGMKALLDPLLSKNPALRPTTQQLLHTEFLKY  328 (478)
T ss_pred             CCCCccCC-HHHHHHHHHHhccChhhCcCHHHHHhCHHHHH
Confidence            12233344 78999999999999999999999999887543

>cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=5.4e-42  Score=312.60  Aligned_cols=250  Identities=22%  Similarity=0.267  Sum_probs=196.9

Q ss_pred             eeEEEEEEeeccCceEEEEEEecCCCCceEEEEecCCCCCh---HHHHHHHHHhhhccccccccccceeeecccCeeEEE
Q 018699           48 KKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFPW---EFYMYRQLDQRISGRERSSFGFAHRIHLYSDYSILV  124 (351)
Q Consensus        48 ~~Y~i~~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~~~---e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv  124 (351)
                      ++|++.+.||+|+||.||+|+ +..+++.||+|++.+....   +...+......+....+++++.....+..++..|+|
T Consensus         1 ~~y~~~~~ig~G~~g~Vy~~~-~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~~~~~lv   79 (333)
T cd05600           1 KDFQILTQVGQGGYGQVFLAK-KKDTGEIVALKRMKKSLLFKLNEVRHVLTERDILTTTKSEWLVKLLYAFQDDEYLYLA   79 (333)
T ss_pred             CCcEEEEEEeecCCeEEEEEE-ECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhCCCCCCccEEEEEEcCCEEEEE
Confidence            469999999999999999999 5677899999998754221   111122222233444578888888888888999999


Q ss_pred             EEecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeeccCCCCCcccC
Q 018699          125 CDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSGPWQDQ  204 (351)
Q Consensus       125 ~e~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~~~~~~~~~  204 (351)
                      |||+++++|.+++..    ...+++..++.++.||+.||.|||++||+||||||+||+++                 .++
T Consensus        80 ~e~~~g~~L~~~l~~----~~~l~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~~-----------------~~~  138 (333)
T cd05600          80 MEYVPGGDFRTLLNN----LGVLSEDHARFYMAEMFEAVDALHELGYIHRDLKPENFLID-----------------ASG  138 (333)
T ss_pred             EeCCCCCCHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEEC-----------------CCC
Confidence            999999999999976    46789999999999999999999999999999999999998                 778


Q ss_pred             CeEEeecCCccccccCCCCccccccccCCCcccceeccCCCCCccchHhHHHHHHHHHHhCccccccccCCCC-------
Q 018699          205 GLCLVDWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQEKKPWKFQVDTYGLCAIVHMMLHNSYMEIEKKASPD-------  277 (351)
Q Consensus       205 ~~~l~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~p~~~~~~~~~-------  277 (351)
                      .++|+|||++.....     ......|++.|+|||++.+..++.++|||||||++|+|++|..||........       
T Consensus       139 ~~kL~Dfg~a~~~~~-----~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~~~~i~~~  213 (333)
T cd05600         139 HIKLTDFGLSKGIVT-----YANSVVGSPDYMAPEVLRGKGYDFTVDYWSLGCMLYEFLCGFPPFSGSTPNETWENLKYW  213 (333)
T ss_pred             CEEEEeCcCCccccc-----ccCCcccCccccChhHhcCCCCCCccceecchHHHhhhhhCCCCCCCCCHHHHHHHHHhc
Confidence            899999998864321     23445789999999999988999999999999999999999999975432210       


Q ss_pred             CceeeecCcchh-hhhHHHHHHHHHHHHhcCCCCCChHHHHHHHHHHHH
Q 018699          278 GGLVYLPKLSFK-RYWKVELWKSLFTNLLNMSSGNDKEVLQNLQKSFQD  325 (351)
Q Consensus       278 ~~~~~~~~~~~~-~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~~~~~~  325 (351)
                      ......+....+ ..++ +.+.+||.+||..+|.+||++.+++.|+|..
T Consensus       214 ~~~~~~~~~~~~~~~~s-~~~~~li~~~l~~~~~rr~s~~~ll~h~~~~  261 (333)
T cd05600         214 KETLQRPVYDDPRFNLS-DEAWDLITKLINDPSRRFGSLEDIKNHPFFK  261 (333)
T ss_pred             cccccCCCCCccccccC-HHHHHHHHHHhhChhhhcCCHHHHHhCcccC
Confidence            000001111100 1123 7899999999999999999999999998743

Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis.

>KOG0192 consensus Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs [Signal transduction mechanisms]

Probab=100.00  E-value=5.1e-42  Score=309.74  Aligned_cols=256  Identities=18%  Similarity=0.200  Sum_probs=205.0

Q ss_pred             eEEEEcCeeEEEEEEeeccCceEEEEEEecCCCCceEEEEecCCCCChHH--HHHHHHHhhhccccccccccceeeeccc
Q 018699           41 KTIEIGGKKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFPWEF--YMYRQLDQRISGRERSSFGFAHRIHLYS  118 (351)
Q Consensus        41 ~~~~i~~~~Y~i~~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~~~e~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~  118 (351)
                      ....+......+.+.||+|+||+||+|.|+..  ..||+|++........  ..+......+....|++++.+.+.....
T Consensus        34 ~~~~i~~~~l~~~~~iG~G~~g~V~~~~~~g~--~~vavK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~f~G~~~~~  111 (362)
T KOG0192|consen   34 PEEEIDPDELPIEEVLGSGSFGTVYKGKWRGT--DVVAVKIISDPDFDDESRKAFRREASLLSRLRHPNIVQFYGACTSP  111 (362)
T ss_pred             cceecChHHhhhhhhcccCCceeEEEEEeCCc--eeEEEEEecchhcChHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCC
Confidence            45667778888889999999999999998532  2399999886543322  2333333445567899999988888776


Q ss_pred             C-eeEEEEEecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCC-ceecCCCCCcEEEeecCCcceeeccC
Q 018699          119 D-YSILVCDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVG-IIHGDFKPDNLLIRYARDELTVLDHD  196 (351)
Q Consensus       119 ~-~~~lv~e~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~-i~H~dl~p~Nill~~~~~~~~~~~~~  196 (351)
                      . ..++||||+++|+|.+++...  .+..++...+..++.||+.|+.|||+++ ||||||||+|||++            
T Consensus       112 ~~~~~iVtEy~~~GsL~~~l~~~--~~~~l~~~~~l~~aldiArGm~YLH~~~~iIHrDLK~~NiLv~------------  177 (362)
T KOG0192|consen  112 PGSLCIVTEYMPGGSLSVLLHKK--RKRKLPLKVRLRIALDIARGMEYLHSEGPIIHRDLKSDNILVD------------  177 (362)
T ss_pred             CCceEEEEEeCCCCcHHHHHhhc--ccCCCCHHHHHHHHHHHHHHHHHHhcCCCeeecccChhhEEEc------------
Confidence            6 789999999999999999874  1578999999999999999999999999 99999999999999            


Q ss_pred             CCCCcccC-CeEEeecCCccccccCCCCccccccccCCCcccceecc--CCCCCccchHhHHHHHHHHHHhCcccccccc
Q 018699          197 RSGPWQDQ-GLCLVDWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQE--KKPWKFQVDTYGLCAIVHMMLHNSYMEIEKK  273 (351)
Q Consensus       197 ~~~~~~~~-~~~l~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~--~~~~~~~~DiwslG~il~~l~~g~~p~~~~~  273 (351)
                           .++ ++||+|||+++......  .......||+.|||||++.  ...|+.++||||+|+++|||+||..||....
T Consensus       178 -----~~~~~~KI~DFGlsr~~~~~~--~~~~~~~GT~~wMAPEv~~~~~~~~~~K~DvySFgIvlWEl~t~~~Pf~~~~  250 (362)
T KOG0192|consen  178 -----LKGKTLKIADFGLSREKVISK--TSMTSVAGTYRWMAPEVLRGEKSPYTEKSDVYSFGIVLWELLTGEIPFEDLA  250 (362)
T ss_pred             -----CCCCEEEECCCccceeecccc--ccccCCCCCccccChhhhcCCCCcCCccchhhhHHHHHHHHHHCCCCCCCCC
Confidence                 665 89999999997544221  2233367899999999999  6799999999999999999999999998766


Q ss_pred             CCCC--CceeeecCcchhhhhHHHHHHHHHHHHhcCCCCCChHHHHHHH
Q 018699          274 ASPD--GGLVYLPKLSFKRYWKVELWKSLFTNLLNMSSGNDKEVLQNLQ  320 (351)
Q Consensus       274 ~~~~--~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~  320 (351)
                      ....  ........+.+|.... +.+..||.+||+.||..||+..+++.
T Consensus       251 ~~~~~~~v~~~~~Rp~~p~~~~-~~l~~l~~~CW~~dp~~RP~f~ei~~  298 (362)
T KOG0192|consen  251 PVQVASAVVVGGLRPPIPKECP-PHLSSLMERCWLVDPSRRPSFLEIVS  298 (362)
T ss_pred             HHHHHHHHHhcCCCCCCCccCC-HHHHHHHHHhCCCCCCcCCCHHHHHH
Confidence            4211  1111234455555555 88999999999999999999999886

>cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=1.8e-42  Score=312.95  Aligned_cols=245  Identities=20%  Similarity=0.222  Sum_probs=191.9

Q ss_pred             eeccCceEEEEEEecCCCCceEEEEecCCCCC---hHHHHHHHHHhhhccccccccccceeeecccCeeEEEEEecCCCC
Q 018699           56 AGQGGFAKVFKAYVNGDPEDVVALKIQKPAFP---WEFYMYRQLDQRISGRERSSFGFAHRIHLYSDYSILVCDYLSQGT  132 (351)
Q Consensus        56 lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~~---~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~s  132 (351)
                      ||+|+||+||+|+ +..+++.||+|++.+...   .+..........+....|++++.....+...+..|+||||+++++
T Consensus         1 lg~G~~g~Vy~~~-~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~g~   79 (312)
T cd05585           1 IGKGSFGKVMQVR-KRDTQRIYALKTIRKAHIVSRSEVTHTLAERTVLAQVNCPFIVPLKFSFQSPEKLYLVLAFINGGE   79 (312)
T ss_pred             CCcCCCeEEEEEE-ECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCcEeceeeEEecCCeEEEEEcCCCCCc
Confidence            7999999999999 567889999999864321   111111122223344567888888777888889999999999999


Q ss_pred             HHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeeccCCCCCcccCCeEEeecC
Q 018699          133 LQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSGPWQDQGLCLVDWG  212 (351)
Q Consensus       133 L~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~~~~~~~~~~~~l~Dfg  212 (351)
                      |.+++..    ...+++..+..++.|++.||.|||++||+||||||+||+++                 .++.++|+|||
T Consensus        80 L~~~l~~----~~~~~~~~~~~~~~qi~~~l~~lH~~~i~HrDlkp~Nili~-----------------~~~~~kl~Dfg  138 (312)
T cd05585          80 LFHHLQR----EGRFDLSRARFYTAELLCALENLHKFNVIYRDLKPENILLD-----------------YQGHIALCDFG  138 (312)
T ss_pred             HHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHhCCeEeCCCCHHHeEEC-----------------CCCcEEEEECc
Confidence            9999977    46789999999999999999999999999999999999998                 77889999999


Q ss_pred             CccccccCCCCccccccccCCCcccceeccCCCCCccchHhHHHHHHHHHHhCccccccccCCCCCceeeecCcchhhhh
Q 018699          213 RGIDLHLFPDNMEFEGDCRTSGFRCIEMQEKKPWKFQVDTYGLCAIVHMMLHNSYMEIEKKASPDGGLVYLPKLSFKRYW  292 (351)
Q Consensus       213 ~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~  292 (351)
                      ++....  ..........||+.|+|||++.+..++.++|||||||++|+|++|..||..................++...
T Consensus       139 ~~~~~~--~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~  216 (312)
T cd05585         139 LCKLNM--KDDDKTNTFCGTPEYLAPELLLGHGYTKAVDWWTLGVLLYEMLTGLPPFYDENVNEMYRKILQEPLRFPDGF  216 (312)
T ss_pred             ccccCc--cCCCccccccCCcccCCHHHHcCCCCCCccceechhHHHHHHHhCCCCcCCCCHHHHHHHHHcCCCCCCCcC
Confidence            886421  112223445789999999999999999999999999999999999999975433211111122333444445


Q ss_pred             HHHHHHHHHHHHhcCCCCCCh---HHHHHHHHHHHH
Q 018699          293 KVELWKSLFTNLLNMSSGNDK---EVLQNLQKSFQD  325 (351)
Q Consensus       293 ~~~~~~~li~~~L~~dP~~R~---s~~e~l~~~~~~  325 (351)
                      + +.+++||.+||.+||.+||   ++.+++.|||..
T Consensus       217 ~-~~~~~li~~~L~~dp~~R~~~~~~~e~l~hp~~~  251 (312)
T cd05585         217 D-RDAKDLLIGLLSRDPTRRLGYNGAQEIKNHPFFS  251 (312)
T ss_pred             C-HHHHHHHHHHcCCCHHHcCCCCCHHHHHcCCCcC
Confidence            5 7899999999999999997   578999998743

Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl

>KOG0600 consensus Cdc2-related protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=100.00  E-value=7.2e-43  Score=311.51  Aligned_cols=255  Identities=18%  Similarity=0.228  Sum_probs=198.9

Q ss_pred             cCeeEEEEEEeeccCceEEEEEEecCCCCceEEEEecCCCCChHHHHHHHH--Hhhhccccccccccceeeeccc--Cee
Q 018699           46 GGKKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFPWEFYMYRQL--DQRISGRERSSFGFAHRIHLYS--DYS  121 (351)
Q Consensus        46 ~~~~Y~i~~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~~~e~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~--~~~  121 (351)
                      .-+.|+..++||+|+||.||+|+ +..+|+.||+|.+..+...+......+  ...+....|+++..+..+....  +.+
T Consensus       115 ~~~~feki~kIGeGTyg~VYkAr-~~~tgkivALKKvr~d~~~~~~~~t~~REI~ILr~l~HpNIikL~eivt~~~~~si  193 (560)
T KOG0600|consen  115 RADSFEKIEKIGEGTYGQVYKAR-DLETGKIVALKKVRFDNEKEGFPITAIREIKILRRLDHPNIIKLEEIVTSKLSGSI  193 (560)
T ss_pred             chHHHHHHHHhcCcchhheeEee-ecccCcEEEEEEeecccCCCcchHHHHHHHHHHHhcCCCcccceeeEEEecCCceE
Confidence            34789999999999999999999 789999999999876653322111111  1234456778888888877655  789


Q ss_pred             EEEEEecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeeccCCCCCc
Q 018699          122 ILVCDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSGPW  201 (351)
Q Consensus       122 ~lv~e~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~~~~~~  201 (351)
                      |+|+|||+. +|.-++..-   +-.|++.++..+++||+.||.|+|++||+|||||.+|||||                 
T Consensus       194 YlVFeYMdh-DL~GLl~~p---~vkft~~qIKc~mkQLl~Gl~~cH~~gvlHRDIK~SNiLid-----------------  252 (560)
T KOG0600|consen  194 YLVFEYMDH-DLSGLLSSP---GVKFTEPQIKCYMKQLLEGLEYCHSRGVLHRDIKGSNILID-----------------  252 (560)
T ss_pred             EEEEecccc-hhhhhhcCC---CcccChHHHHHHHHHHHHHHHHHhhcCeeeccccccceEEc-----------------
Confidence            999999954 888777663   45799999999999999999999999999999999999999                 


Q ss_pred             ccCCeEEeecCCccccccCCCCccccccccCCCcccceeccC-CCCCccchHhHHHHHHHHHHhCccccccccCCCCC--
Q 018699          202 QDQGLCLVDWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQEK-KPWKFQVDTYGLCAIVHMMLHNSYMEIEKKASPDG--  278 (351)
Q Consensus       202 ~~~~~~l~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~~DiwslG~il~~l~~g~~p~~~~~~~~~~--  278 (351)
                      .+|.+||+|||+|+...... ...+...+-|.+|+|||++.| ..|+.++|+||.|||+.||+.|++.|...++.+..  
T Consensus       253 n~G~LKiaDFGLAr~y~~~~-~~~~T~rVvTLWYRpPELLLG~t~Yg~aVDlWS~GCIl~El~~gkPI~~G~tEveQl~k  331 (560)
T KOG0600|consen  253 NNGVLKIADFGLARFYTPSG-SAPYTSRVVTLWYRPPELLLGATSYGTAVDLWSVGCILAELFLGKPILQGRTEVEQLHK  331 (560)
T ss_pred             CCCCEEeccccceeeccCCC-CcccccceEEeeccChHHhcCCcccccceeehhhhHHHHHHHcCCCCcCCccHHHHHHH
Confidence            88999999999997544222 223666778999999999987 56899999999999999999999887655443110  


Q ss_pred             --------------------ceeeecCcchhhhhH------HHHHHHHHHHHhcCCCCCChHHHHHHHHHH
Q 018699          279 --------------------GLVYLPKLSFKRYWK------VELWKSLFTNLLNMSSGNDKEVLQNLQKSF  323 (351)
Q Consensus       279 --------------------~~~~~~~~~~~~~~~------~~~~~~li~~~L~~dP~~R~s~~e~l~~~~  323 (351)
                                          .-.+.+..++.+...      .+...+|+..||..||.+|.||.++|.+.|
T Consensus       332 IfklcGSP~e~~W~~~kLP~~~~~kp~~~y~r~l~E~~~~~~~~~l~Ll~~lL~ldP~kR~tA~~aL~sey  402 (560)
T KOG0600|consen  332 IFKLCGSPTEDYWPVSKLPHATIFKPQQPYKRRLRETFKDFPASALDLLEKLLSLDPDKRGTASSALQSEY  402 (560)
T ss_pred             HHHHhCCCChhccccccCCcccccCCCCcccchHHHHhccCCHHHHHHHHHHhccCccccccHHHHhcCcc
Confidence                                011122223222221      166788999999999999999999999765

>cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5

Probab=100.00  E-value=5.1e-42  Score=306.21  Aligned_cols=252  Identities=19%  Similarity=0.225  Sum_probs=190.5

Q ss_pred             eeEEEEEEeeccCceEEEEEEecCCCCceEEEEecCCCCChH--HHHHHHHHhhhccccccccccceeeecccCeeEEEE
Q 018699           48 KKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFPWE--FYMYRQLDQRISGRERSSFGFAHRIHLYSDYSILVC  125 (351)
Q Consensus        48 ~~Y~i~~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~~~e--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~  125 (351)
                      ++|++.+.||+|+||+||+|+ +..+++.||+|++......+  ...............++++......+...+..|+||
T Consensus         1 ~~y~~~~~lg~g~~~~v~~~~-~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~   79 (287)
T cd07848           1 NKFEVLGVVGEGAYGVVLKCR-HKETKEIVAIKKFKDSEENEEVKETTLRELKMLRTLKQENIVELKEAFRRRGKLYLVF   79 (287)
T ss_pred             CCceEEEEecccCCEEEEEEE-ECCCCcEEEEEEEecccccccchhhHHHHHHHHHhCCCccccchhhhEecCCEEEEEE
Confidence            479999999999999999999 56788999999987543221  111112222334456778888877777888999999


Q ss_pred             EecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeeccCCCCCcccCC
Q 018699          126 DYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSGPWQDQG  205 (351)
Q Consensus       126 e~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~~~~~~~~~~  205 (351)
                      ||++++.+..+...    +..+++..++.++.|++.|+.|||+.||+|+||+|+||+++                 .++.
T Consensus        80 e~~~~~~l~~~~~~----~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dlkp~Nill~-----------------~~~~  138 (287)
T cd07848          80 EYVEKNMLELLEEM----PNGVPPEKVRSYIYQLIKAIHWCHKNDIVHRDIKPENLLIS-----------------HNDV  138 (287)
T ss_pred             ecCCCCHHHHHHhc----CCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEc-----------------CCCc
Confidence            99987666554433    45789999999999999999999999999999999999998                 6778


Q ss_pred             eEEeecCCccccccCCCCccccccccCCCcccceeccCCCCCccchHhHHHHHHHHHHhCccccccccCCCC--------
Q 018699          206 LCLVDWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQEKKPWKFQVDTYGLCAIVHMMLHNSYMEIEKKASPD--------  277 (351)
Q Consensus       206 ~~l~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~p~~~~~~~~~--------  277 (351)
                      ++|+|||++...... .........|++.|+|||++.+..++.++|||||||++|+|++|.+||........        
T Consensus       139 ~kl~Dfg~~~~~~~~-~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~el~~g~~pf~~~~~~~~~~~~~~~~  217 (287)
T cd07848         139 LKLCDFGFARNLSEG-SNANYTEYVATRWYRSPELLLGAPYGKAVDMWSVGCILGELSDGQPLFPGESEIDQLFTIQKVL  217 (287)
T ss_pred             EEEeeccCccccccc-ccccccccccccccCCcHHHcCCCCCCchhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhh
Confidence            999999998653211 11122345689999999999888899999999999999999999999865332100        


Q ss_pred             Cc----------------eeeecCcch--------hhhhHHHHHHHHHHHHhcCCCCCChHHHHHHHHHH
Q 018699          278 GG----------------LVYLPKLSF--------KRYWKVELWKSLFTNLLNMSSGNDKEVLQNLQKSF  323 (351)
Q Consensus       278 ~~----------------~~~~~~~~~--------~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~~~~  323 (351)
                      +.                ....+....        ....+ ..+.+||.+||++||++|||+.|+|+|||
T Consensus       218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s-~~~~dll~~~L~~~P~~R~s~~~~l~hp~  286 (287)
T cd07848         218 GPLPAEQMKLFYSNPRFHGLRFPAVNHPQSLERRYLGILS-GVLLDLMKNLLKLNPTDRYLTEQCLNHPA  286 (287)
T ss_pred             CCCCHHHHHhhhccchhcccccCcccCcccHHHhhhcccC-HHHHHHHHHHccCCcccCCCHHHHhcCCC
Confidence            00                000000000        01122 67999999999999999999999999986

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes

>KOG0663 consensus Protein kinase PITSLRE and related kinases [General function prediction only]

Probab=100.00  E-value=6.9e-43  Score=297.10  Aligned_cols=251  Identities=19%  Similarity=0.235  Sum_probs=198.8

Q ss_pred             eeEEEEEEeeccCceEEEEEEecCCCCceEEEEecCCCCChH---HHHHHHHHhhhccccccccccceeeecc--cCeeE
Q 018699           48 KKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFPWE---FYMYRQLDQRISGRERSSFGFAHRIHLY--SDYSI  122 (351)
Q Consensus        48 ~~Y~i~~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~~~e---~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~  122 (351)
                      +.|+.+..|+.|+||.||+|+ +..+++.||+|.++.+...+   ...++++.-. ....|++++.+..+...  -+.+|
T Consensus        76 ~efe~lnrI~EGtyGiVYRak-dk~t~eIVALKr~kmekek~GFPItsLREIniL-l~~~H~NIV~vkEVVvG~~~d~iy  153 (419)
T KOG0663|consen   76 EEFEKLNRIEEGTYGVVYRAK-DKKTDEIVALKRLKMEKEKEGFPITSLREINIL-LKARHPNIVEVKEVVVGSNMDKIY  153 (419)
T ss_pred             HHHHHHhhcccCcceeEEEec-cCCcceeEEeeecccccccCCCcchhHHHHHHH-HhcCCCCeeeeEEEEeccccceee
Confidence            689999999999999999999 68889999999988654433   2233333322 33447888888777654  35789


Q ss_pred             EEEEecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeeccCCCCCcc
Q 018699          123 LVCDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSGPWQ  202 (351)
Q Consensus       123 lv~e~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~~~~~~~  202 (351)
                      +|||||+ -+|..++...   +.+|...++..++.|++.|++|||.+.|+||||||+|+++.                 .
T Consensus       154 ~VMe~~E-hDLksl~d~m---~q~F~~~evK~L~~QlL~glk~lH~~wilHRDLK~SNLLm~-----------------~  212 (419)
T KOG0663|consen  154 IVMEYVE-HDLKSLMETM---KQPFLPGEVKTLMLQLLRGLKHLHDNWILHRDLKTSNLLLS-----------------H  212 (419)
T ss_pred             eeHHHHH-hhHHHHHHhc---cCCCchHHHHHHHHHHHHHHHHHhhceeEecccchhheeec-----------------c
Confidence            9999995 5999999987   46899999999999999999999999999999999999999                 8


Q ss_pred             cCCeEEeecCCccccccCCCCccccccccCCCcccceeccC-CCCCccchHhHHHHHHHHHHhCccccccccCCCC----
Q 018699          203 DQGLCLVDWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQEK-KPWKFQVDTYGLCAIVHMMLHNSYMEIEKKASPD----  277 (351)
Q Consensus       203 ~~~~~l~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~~DiwslG~il~~l~~g~~p~~~~~~~~~----  277 (351)
                      .|.+||+|||+|+...  .+...+...+-|.+|+|||++.| ..|+.+.|+||+|||+.||+++.+.|....+...    
T Consensus       213 ~G~lKiaDFGLAR~yg--sp~k~~T~lVVTLWYRaPELLLG~~tyst~iDMWSvGCI~aE~l~~kPlf~G~sE~dQl~~I  290 (419)
T KOG0663|consen  213 KGILKIADFGLAREYG--SPLKPYTPLVVTLWYRAPELLLGAKTYSTAVDMWSVGCIFAELLTQKPLFPGKSEIDQLDKI  290 (419)
T ss_pred             CCcEEecccchhhhhc--CCcccCcceEEEeeecCHHHhcCCcccCcchhhhhHHHHHHHHHhcCCCCCCCchHHHHHHH
Confidence            8999999999998754  23445677788999999999977 5689999999999999999999988765544311    


Q ss_pred             ------------Cce---------ee--ecCcc----hhhh-hHHHHHHHHHHHHhcCCCCCChHHHHHHHHHHH
Q 018699          278 ------------GGL---------VY--LPKLS----FKRY-WKVELWKSLFTNLLNMSSGNDKEVLQNLQKSFQ  324 (351)
Q Consensus       278 ------------~~~---------~~--~~~~~----~~~~-~~~~~~~~li~~~L~~dP~~R~s~~e~l~~~~~  324 (351)
                                  ..+         .+  .+...    ++.. .+ +...+|+..+|.+||.+|.|+.|+|.|.|.
T Consensus       291 f~llGtPte~iwpg~~~lp~~k~~~f~~~pyn~lr~kF~~~~ls-e~g~~Lln~llt~dP~kR~tA~~~L~h~~F  364 (419)
T KOG0663|consen  291 FKLLGTPSEAIWPGYSELPAVKKMTFSEHPYNNLRKKFGALSLS-EQGFDLLNKLLTYDPGKRITAEDGLKHEYF  364 (419)
T ss_pred             HHHhCCCccccCCCccccchhhccccCCCCchhhhhhccccccc-hhHHHHHHHHhccCccccccHHHhhccccc
Confidence                        000         00  00001    1111 12 677899999999999999999999999753

>KOG0658 consensus Glycogen synthase kinase-3 [Carbohydrate transport and metabolism]

Probab=100.00  E-value=2e-42  Score=298.46  Aligned_cols=261  Identities=21%  Similarity=0.248  Sum_probs=201.5

Q ss_pred             cceEEEEcCeeEEEEEEeeccCceEEEEEEecCCCCceEEEEecCCCCC---hHHHHHHHHHhhhccccccccccceeee
Q 018699           39 RNKTIEIGGKKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFP---WEFYMYRQLDQRISGRERSSFGFAHRIH  115 (351)
Q Consensus        39 ~~~~~~i~~~~Y~i~~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~~---~e~~~~~~~~~~~~~~~~~~~~~~~~~~  115 (351)
                      .+....+   +|+-.+.+|+|+||+||+|.. ..+++.||||.+-++..   .|..+++       ...|+|++.+...+
T Consensus        18 ~~~~~~i---~~~~~~liG~GsFg~Vyq~~~-~e~~~~vAIKKv~~d~r~knrEl~im~-------~l~HpNIV~L~~~f   86 (364)
T KOG0658|consen   18 DGKKVEI---SYEAVRLIGSGSFGVVYQAKL-RETEEEVAIKKVLQDKRYKNRELQIMR-------KLDHPNIVRLLYFF   86 (364)
T ss_pred             CCcceEE---EEEeeEEEeecccceEEEEEE-cCCCceeEEEEecCCCCcCcHHHHHHH-------hcCCcCeeeEEEEE
Confidence            3344455   599999999999999999995 56689999998765533   2333333       56677877766555


Q ss_pred             cc--cC---eeEEEEEecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcc
Q 018699          116 LY--SD---YSILVCDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDEL  190 (351)
Q Consensus       116 ~~--~~---~~~lv~e~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~  190 (351)
                      ..  ++   +..+||||++ .+|.+.++.+...+..++.-.++.++.||++|++|||+.||+||||||.|+++|.     
T Consensus        87 ~~~~~~d~~~lnlVleymP-~tL~~~~r~~~~~~~~mp~~~iKLYt~Qlfrgl~yLh~~~IcHRDIKPqNlLvD~-----  160 (364)
T KOG0658|consen   87 SSSTESDEVYLNLVLEYMP-ETLYRVIRHYTRANQRMPLLEIKLYTYQLFRGLAYLHSHGICHRDIKPQNLLVDP-----  160 (364)
T ss_pred             EecCCCchhHHHHHHHhch-HHHHHHHHHHhhcCCCCceeeeHHHHHHHHHHHHHHHhcCcccCCCChheEEEcC-----
Confidence            32  22   4568999995 5999999987777889999999999999999999999999999999999999995     


Q ss_pred             eeeccCCCCCcccCCeEEeecCCccccccCCCCccccccccCCCcccceeccC-CCCCccchHhHHHHHHHHHHhCcccc
Q 018699          191 TVLDHDRSGPWQDQGLCLVDWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQEK-KPWKFQVDTYGLCAIVHMMLHNSYME  269 (351)
Q Consensus       191 ~~~~~~~~~~~~~~~~~l~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~~DiwslG~il~~l~~g~~p~  269 (351)
                                 ..|.+||||||.|.....   +.+..+...|+.|+|||++.| ..|+.+.||||.||++.||+.|++.|
T Consensus       161 -----------~tg~LKicDFGSAK~L~~---~epniSYicSRyYRaPELifga~~Yt~~IDiWSaGCV~aELl~g~plF  226 (364)
T KOG0658|consen  161 -----------DTGVLKICDFGSAKVLVK---GEPNISYICSRYYRAPELIFGATEYTTSIDIWSAGCVMAELLKGQPLF  226 (364)
T ss_pred             -----------CCCeEEeccCCcceeecc---CCCceeEEEeccccCHHHHcCccccCceeEEhhhhHHHHHHhcCCccc
Confidence                       457899999999976543   333455667999999999977 56899999999999999999999988


Q ss_pred             ccccCCCC--------------------Cce-----eeecCcc----hhhhhHHHHHHHHHHHHhcCCCCCChHHHHHHH
Q 018699          270 IEKKASPD--------------------GGL-----VYLPKLS----FKRYWKVELWKSLFTNLLNMSSGNDKEVLQNLQ  320 (351)
Q Consensus       270 ~~~~~~~~--------------------~~~-----~~~~~~~----~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~  320 (351)
                      .+++....                    ..+     .......    +....+ +++.+|+.++|.++|.+|.++.|++.
T Consensus       227 pG~s~~dQL~eIik~lG~Pt~e~I~~mn~~y~~~~~p~ik~~~~~~~~~~~~~-~d~~dll~~~L~Y~P~~R~~~~~~l~  305 (364)
T KOG0658|consen  227 PGDSSVDQLVEIIKVLGTPTREDIKSMNPNYTEFKFPQIKAHPWHKVFFKRLP-PDALDLLSKLLQYSPSKRLSALEALA  305 (364)
T ss_pred             CCCCHHHHHHHHHHHhCCCCHHHHhhcCcccccccCcccccccceeecccCCC-HHHHHHHHHHhccChhhcCCHHHHhc
Confidence            76543211                    010     0000001    111123 78899999999999999999999999


Q ss_pred             HHHHHHHhhCh
Q 018699          321 KSFQDYLCSNP  331 (351)
Q Consensus       321 ~~~~~~~~~~~  331 (351)
                      |+|.+-+...+
T Consensus       306 h~fFdelr~~~  316 (364)
T KOG0658|consen  306 HPFFDELRDPN  316 (364)
T ss_pred             chhhHHhhCcC
Confidence            99988776553

>PTZ00284 protein kinase; Provisional

Probab=100.00  E-value=5.1e-42  Score=326.19  Aligned_cols=270  Identities=17%  Similarity=0.205  Sum_probs=187.7

Q ss_pred             EcCeeEEEEEEeeccCceEEEEEEecCCCCceEEEEecCCCCC--h----HHHHHHHHHhhhccccccccccceeeec-c
Q 018699           45 IGGKKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFP--W----EFYMYRQLDQRISGRERSSFGFAHRIHL-Y  117 (351)
Q Consensus        45 i~~~~Y~i~~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~~--~----e~~~~~~~~~~~~~~~~~~~~~~~~~~~-~  117 (351)
                      +..++|++.+.||+|+||+||+|+ +..+++.||||++.....  .    |...++.+.+. ....+.++..+..++. .
T Consensus       126 ~~~~~y~i~~~lG~G~fg~V~~a~-~~~~~~~vAvK~i~~~~~~~~~~~~e~~~l~~l~~~-~~~~~~~i~~i~~~~~~~  203 (467)
T PTZ00284        126 VSTQRFKILSLLGEGTFGKVVEAW-DRKRKEYCAVKIVRNVPKYTRDAKIEIQFMEKVRQA-DPADRFPLMKIQRYFQNE  203 (467)
T ss_pred             cCCCcEEEEEEEEeccCEEEEEEE-EcCCCeEEEEEEEecchhhHHHHHHHHHHHHHHhhc-CcccCcceeeeEEEEEcC
Confidence            345789999999999999999999 567789999999864211  1    22222222221 1112223344444443 3


Q ss_pred             cCeeEEEEEecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHH-CCceecCCCCCcEEEeecCCcceeeccC
Q 018699          118 SDYSILVCDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHD-VGIIHGDFKPDNLLIRYARDELTVLDHD  196 (351)
Q Consensus       118 ~~~~~lv~e~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~-~~i~H~dl~p~Nill~~~~~~~~~~~~~  196 (351)
                      .+.+|+||+++ +++|.+++..    ...+++..+..++.||+.||.|||+ .||+||||||+||+++.++.... ....
T Consensus       204 ~~~~~iv~~~~-g~~l~~~l~~----~~~l~~~~~~~i~~qi~~aL~yLH~~~gIiHrDlKP~NILl~~~~~~~~-~~~~  277 (467)
T PTZ00284        204 TGHMCIVMPKY-GPCLLDWIMK----HGPFSHRHLAQIIFQTGVALDYFHTELHLMHTDLKPENILMETSDTVVD-PVTN  277 (467)
T ss_pred             CceEEEEEecc-CCCHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHhcCCeecCCCCHHHEEEecCCcccc-cccc
Confidence            45789999998 8899998876    4679999999999999999999998 59999999999999985432110 0000


Q ss_pred             CCCCcccCCeEEeecCCccccccCCCCccccccccCCCcccceeccCCCCCccchHhHHHHHHHHHHhCccccccccCCC
Q 018699          197 RSGPWQDQGLCLVDWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQEKKPWKFQVDTYGLCAIVHMMLHNSYMEIEKKASP  276 (351)
Q Consensus       197 ~~~~~~~~~~~l~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~p~~~~~~~~  276 (351)
                      .........+||+|||.+...     .......+||+.|+|||++.+..++.++|||||||++|+|++|++||.......
T Consensus       278 ~~~~~~~~~vkl~DfG~~~~~-----~~~~~~~~gt~~Y~APE~~~~~~~~~~~DiwSlGvil~elltG~~pf~~~~~~~  352 (467)
T PTZ00284        278 RALPPDPCRVRICDLGGCCDE-----RHSRTAIVSTRHYRSPEVVLGLGWMYSTDMWSMGCIIYELYTGKLLYDTHDNLE  352 (467)
T ss_pred             cccCCCCceEEECCCCccccC-----ccccccccCCccccCcHHhhcCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHH
Confidence            000012235999999977431     122345678999999999999999999999999999999999999996433210


Q ss_pred             C--------Ccee---------------------eecC------------cchhhhhHHHHHHHHHHHHhcCCCCCChHH
Q 018699          277 D--------GGLV---------------------YLPK------------LSFKRYWKVELWKSLFTNLLNMSSGNDKEV  315 (351)
Q Consensus       277 ~--------~~~~---------------------~~~~------------~~~~~~~~~~~~~~li~~~L~~dP~~R~s~  315 (351)
                      .        +...                     ..+.            .........+.+.+||.+||.+||.+|||+
T Consensus       353 ~~~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dP~~R~ta  432 (467)
T PTZ00284        353 HLHLMEKTLGRLPSEWAGRCGTEEARLLYNSAGQLRPCTDPKHLARIARARPVREVIRDDLLCDLIYGLLHYDRQKRLNA  432 (467)
T ss_pred             HHHHHHHHcCCCCHHHHhhccchhHHHHhhhcccccccCCHHHHHhhhcccchhhhhchHHHHHHHHHhCCcChhhCCCH
Confidence            0        0000                     0000            000011112567899999999999999999


Q ss_pred             HHHHHHHHHHHH
Q 018699          316 LQNLQKSFQDYL  327 (351)
Q Consensus       316 ~e~l~~~~~~~~  327 (351)
                      .|+|.|||....
T Consensus       433 ~e~L~Hp~~~~~  444 (467)
T PTZ00284        433 RQMTTHPYVLKY  444 (467)
T ss_pred             HHHhcCcccccc
Confidence            999999986543

>cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N

Probab=100.00  E-value=3.5e-42  Score=312.66  Aligned_cols=249  Identities=18%  Similarity=0.169  Sum_probs=195.1

Q ss_pred             EEEEEEeeccCceEEEEEEecCCCCceEEEEecCCCCC---hHHHHHHHH---HhhhccccccccccceeeecccCeeEE
Q 018699           50 YQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFP---WEFYMYRQL---DQRISGRERSSFGFAHRIHLYSDYSIL  123 (351)
Q Consensus        50 Y~i~~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~~---~e~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~l  123 (351)
                      |++.+.||+|+||.||+|. +..+++.||||++.+...   .+...+...   ........|+++......+...+..|+
T Consensus         1 y~i~~~lg~G~~g~Vy~~~-~~~~~~~~aiK~~~~~~~~~~~~~~~l~~e~~~~~~~~~l~hp~i~~~~~~~~~~~~~~l   79 (324)
T cd05589           1 FRCLAVLGRGHFGKVLLAE-YKKTGELYAIKALKKGDIIARDEVESLMCEKRIFETANSERHPFLVNLFACFQTEDHVCF   79 (324)
T ss_pred             CeEEEEEeecCCEEEEEEE-ECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccccCCCChhceeeEEEcCCEEEE
Confidence            7889999999999999999 567789999999875321   111211111   122334568888888888888899999


Q ss_pred             EEEecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeeccCCCCCccc
Q 018699          124 VCDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSGPWQD  203 (351)
Q Consensus       124 v~e~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~~~~~~~~  203 (351)
                      ||||+++++|...+..     ..+++..++.++.||+.|+.|||++||+||||||+||+++                 .+
T Consensus        80 v~E~~~~~~L~~~~~~-----~~l~~~~~~~~~~qi~~al~~lH~~~ivHrdlkp~Nill~-----------------~~  137 (324)
T cd05589          80 VMEYAAGGDLMMHIHT-----DVFSEPRAVFYAACVVLGLQYLHENKIVYRDLKLDNLLLD-----------------TE  137 (324)
T ss_pred             EEcCCCCCcHHHHhhc-----CCCCHHHHHHHHHHHHHHHHHHHhCCeEecCCCHHHeEEC-----------------CC
Confidence            9999999999988754     5789999999999999999999999999999999999999                 77


Q ss_pred             CCeEEeecCCccccccCCCCccccccccCCCcccceeccCCCCCccchHhHHHHHHHHHHhCccccccccCCCCCceeee
Q 018699          204 QGLCLVDWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQEKKPWKFQVDTYGLCAIVHMMLHNSYMEIEKKASPDGGLVYL  283 (351)
Q Consensus       204 ~~~~l~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~p~~~~~~~~~~~~~~~  283 (351)
                      +.++|+|||++....  ..........|++.|+|||.+.+..++.++|||||||++|+|++|..||..............
T Consensus       138 ~~~kL~Dfg~~~~~~--~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~G~~pf~~~~~~~~~~~i~~  215 (324)
T cd05589         138 GFVKIADFGLCKEGM--GFGDRTSTFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIYEMLVGESPFPGDDEEEVFDSIVN  215 (324)
T ss_pred             CcEEeCcccCCccCC--CCCCcccccccCccccCHhHhcCCCCCcccchhhHHHHHHHHHhCCCCCCCCCHHHHHHHHHh
Confidence            889999999875422  122233456789999999999988899999999999999999999999975432211111111


Q ss_pred             cCcchhhhhHHHHHHHHHHHHhcCCCCCCh-----HHHHHHHHHHH
Q 018699          284 PKLSFKRYWKVELWKSLFTNLLNMSSGNDK-----EVLQNLQKSFQ  324 (351)
Q Consensus       284 ~~~~~~~~~~~~~~~~li~~~L~~dP~~R~-----s~~e~l~~~~~  324 (351)
                      .....+...+ ..+.++|.+||+.||.+||     ++.+++.|+|.
T Consensus       216 ~~~~~p~~~~-~~~~~li~~~L~~dP~~R~~~~~~~~~~l~~~~~f  260 (324)
T cd05589         216 DEVRYPRFLS-REAISIMRRLLRRNPERRLGSGEKDAEDVKKQPFF  260 (324)
T ss_pred             CCCCCCCCCC-HHHHHHHHHHhhcCHhHcCCCCCCCHHHHhhCCCc
Confidence            2222333344 7889999999999999999     68899998863

Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved

>cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta

Probab=100.00  E-value=2.7e-42  Score=312.16  Aligned_cols=246  Identities=18%  Similarity=0.201  Sum_probs=190.1

Q ss_pred             EEeeccCceEEEEEEecCCCCceEEEEecCCCCC---hHHHH-HHHHHhhhccccccccccceeeecccCeeEEEEEecC
Q 018699           54 GCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFP---WEFYM-YRQLDQRISGRERSSFGFAHRIHLYSDYSILVCDYLS  129 (351)
Q Consensus        54 ~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~~---~e~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~  129 (351)
                      +.||+|+||.||+|+ +..+|+.||+|++.+...   .+... ..+.........++++......+...+..|+||||+.
T Consensus         1 ~~lg~G~~g~V~~~~-~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~E~~~   79 (316)
T cd05620           1 KVLGKGSFGKVLLAE-LKGKGEYFAVKALKKDVVLIDDDVECTMVEKRVLALAWENPFLTHLYCTFQTKEHLFFVMEFLN   79 (316)
T ss_pred             CeeeeCCCeEEEEEE-ECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCCccCeeEEEEeCCEEEEEECCCC
Confidence            479999999999999 567889999999875421   11111 1111111123467788888888888899999999999


Q ss_pred             CCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeeccCCCCCcccCCeEEe
Q 018699          130 QGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSGPWQDQGLCLV  209 (351)
Q Consensus       130 ~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~~~~~~~~~~~~l~  209 (351)
                      +++|..++..    +..+++..+..++.|++.||+|||++||+||||||+||+++                 .++.++|+
T Consensus        80 ~g~L~~~i~~----~~~~~~~~~~~~~~qi~~~l~~lH~~~ivHrDlkp~Nil~~-----------------~~~~~kl~  138 (316)
T cd05620          80 GGDLMFHIQD----KGRFDLYRATFYAAEIVCGLQFLHSKGIIYRDLKLDNVMLD-----------------RDGHIKIA  138 (316)
T ss_pred             CCcHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEEC-----------------CCCCEEeC
Confidence            9999999876    46789999999999999999999999999999999999999                 67789999


Q ss_pred             ecCCccccccCCCCccccccccCCCcccceeccCCCCCccchHhHHHHHHHHHHhCccccccccCCCCCceeeecCcchh
Q 018699          210 DWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQEKKPWKFQVDTYGLCAIVHMMLHNSYMEIEKKASPDGGLVYLPKLSFK  289 (351)
Q Consensus       210 Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~  289 (351)
                      |||++....  ..........|++.|+|||++.+..++.++|||||||++|+|++|..||..................++
T Consensus       139 Dfg~~~~~~--~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~  216 (316)
T cd05620         139 DFGMCKENV--FGDNRASTFCGTPDYIAPEILQGLKYTFSVDWWSFGVLLYEMLIGQSPFHGDDEDELFESIRVDTPHYP  216 (316)
T ss_pred             ccCCCeecc--cCCCceeccCCCcCccCHHHHcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCC
Confidence            999886321  112233456789999999999999999999999999999999999999975443211111112223334


Q ss_pred             hhhHHHHHHHHHHHHhcCCCCCChHHH-HHHHHHHH
Q 018699          290 RYWKVELWKSLFTNLLNMSSGNDKEVL-QNLQKSFQ  324 (351)
Q Consensus       290 ~~~~~~~~~~li~~~L~~dP~~R~s~~-e~l~~~~~  324 (351)
                      ...+ ..+++||.+||..||++|+++. +++.|+|.
T Consensus       217 ~~~~-~~~~~li~~~l~~dP~~R~~~~~~~~~h~~f  251 (316)
T cd05620         217 RWIT-KESKDILEKLFERDPTRRLGVVGNIRGHPFF  251 (316)
T ss_pred             CCCC-HHHHHHHHHHccCCHHHcCCChHHHHcCCCc
Confidence            4344 7899999999999999999985 56668864

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I

>cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase

Probab=100.00  E-value=2.8e-41  Score=303.87  Aligned_cols=254  Identities=19%  Similarity=0.264  Sum_probs=191.8

Q ss_pred             CeeEEEEEEeeccCceEEEEEEecCCCCceEEEEecCCCCCh--HHHHHHHHHhhhccccccccccceeeecccCeeEEE
Q 018699           47 GKKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFPW--EFYMYRQLDQRISGRERSSFGFAHRIHLYSDYSILV  124 (351)
Q Consensus        47 ~~~Y~i~~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~~~--e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv  124 (351)
                      .++|++.+.||.|+||+||+|+ +..+++.||+|++......  .....++ ........|++++....+...+...++|
T Consensus         4 ~~~y~~~~~lg~G~~g~V~~~~-~~~~~~~~aiK~~~~~~~~~~~~~~~~E-~~~l~~l~h~niv~~~~~~~~~~~~~lv   81 (303)
T cd07869           4 ADSYEKLEKLGEGSYATVYKGK-SKVNGKLVALKVIRLQEEEGTPFTAIRE-ASLLKGLKHANIVLLHDIIHTKETLTLV   81 (303)
T ss_pred             cccceEeeeEEecCCEEEEEEE-ECCCCCEEEEEEeccccccccchhHHHH-HHHHhhCCCCCcCeEEEEEecCCeEEEE
Confidence            3689999999999999999999 5677899999998644221  1112222 2223445678888888888888899999


Q ss_pred             EEecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeeccCCCCCcccC
Q 018699          125 CDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSGPWQDQ  204 (351)
Q Consensus       125 ~e~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~~~~~~~~~  204 (351)
                      |||+ +++|.+++...   ...+++..+..++.|++.|+.|||++||+|+||||+||+++                 .++
T Consensus        82 ~e~~-~~~l~~~~~~~---~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dlkp~Nill~-----------------~~~  140 (303)
T cd07869          82 FEYV-HTDLCQYMDKH---PGGLHPENVKLFLFQLLRGLSYIHQRYILHRDLKPQNLLIS-----------------DTG  140 (303)
T ss_pred             EECC-CcCHHHHHHhC---CCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEC-----------------CCC
Confidence            9999 56888887654   45688999999999999999999999999999999999998                 677


Q ss_pred             CeEEeecCCccccccCCCCccccccccCCCcccceeccC-CCCCccchHhHHHHHHHHHHhCccccccccCCC-------
Q 018699          205 GLCLVDWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQEK-KPWKFQVDTYGLCAIVHMMLHNSYMEIEKKASP-------  276 (351)
Q Consensus       205 ~~~l~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~~DiwslG~il~~l~~g~~p~~~~~~~~-------  276 (351)
                      .++|+|||++.....  .........+++.|+|||++.+ ..++.++|||||||++|+|++|..||.......       
T Consensus       141 ~~kl~Dfg~~~~~~~--~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~  218 (303)
T cd07869         141 ELKLADFGLARAKSV--PSHTYSNEVVTLWYRPPDVLLGSTEYSTCLDMWGVGCIFVEMIQGVAAFPGMKDIQDQLERIF  218 (303)
T ss_pred             CEEECCCCcceeccC--CCccCCCCcccCCCCChHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCccHHHHHHHHH
Confidence            899999998864321  1222344567899999999865 457889999999999999999999996432110       


Q ss_pred             -------CC--------------ceeeecCcchhhhhH----HHHHHHHHHHHhcCCCCCChHHHHHHHHHHHH
Q 018699          277 -------DG--------------GLVYLPKLSFKRYWK----VELWKSLFTNLLNMSSGNDKEVLQNLQKSFQD  325 (351)
Q Consensus       277 -------~~--------------~~~~~~~~~~~~~~~----~~~~~~li~~~L~~dP~~R~s~~e~l~~~~~~  325 (351)
                             ..              .+....+......|.    .+.+.+||.+||++||.+|||+.|++.|||..
T Consensus       219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dp~~R~s~~~~l~h~~f~  292 (303)
T cd07869         219 LVLGTPNEDTWPGVHSLPHFKPERFTLYSPKNLRQAWNKLSYVNHAEDLASKLLQCFPKNRLSAQAALSHEYFS  292 (303)
T ss_pred             HHhCCCChhhccchhhccccccccccccCCccHHHHhhccCCChHHHHHHHHHhccCchhccCHHHHhcCcccc
Confidence                   00              000001111111121    15688999999999999999999999998753

Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an

>cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=1.6e-42  Score=318.20  Aligned_cols=253  Identities=19%  Similarity=0.237  Sum_probs=197.2

Q ss_pred             eeEEEEEEeeccCceEEEEEEecCCCCceEEEEecCCCCC---hHHHHHHHHHhhhccccccccccceeeecccCeeEEE
Q 018699           48 KKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFP---WEFYMYRQLDQRISGRERSSFGFAHRIHLYSDYSILV  124 (351)
Q Consensus        48 ~~Y~i~~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~~---~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv  124 (351)
                      ++|++.+.||+|+||+||+|+ +..+++.||||++.+...   .....+...........+++++.....+..++..|+|
T Consensus         1 ~~y~~~~~lg~G~~g~Vy~~~-~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv   79 (350)
T cd05573           1 DDFEVIKVIGRGAFGEVWLVR-DKDTGQVYAMKVLRKSDMIKRNQIAHVRAERDILADADSPWIVKLYYSFQDEEHLYLV   79 (350)
T ss_pred             CCceEEEEEEeCCcEEEEEEE-ECCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhcCCCCccchhhheecCCeEEEE
Confidence            479999999999999999999 567889999999875321   1222222333334455677888887777788899999


Q ss_pred             EEecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeeccCCCCCcccC
Q 018699          125 CDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSGPWQDQ  204 (351)
Q Consensus       125 ~e~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~~~~~~~~~  204 (351)
                      |||+++++|.+++..    ...+++..++.++.|++.||.|||++||+||||||+||+++                 .++
T Consensus        80 ~e~~~~~~L~~~l~~----~~~l~~~~~~~i~~qi~~aL~~LH~~giiH~Dlkp~NIll~-----------------~~~  138 (350)
T cd05573          80 MEYMPGGDLMNLLIR----KDVFPEETARFYIAELVLALDSVHKLGFIHRDIKPDNILID-----------------ADG  138 (350)
T ss_pred             EcCCCCCCHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEEC-----------------CCC
Confidence            999999999999987    46799999999999999999999999999999999999999                 778


Q ss_pred             CeEEeecCCccccccCC---------------------------CCccccccccCCCcccceeccCCCCCccchHhHHHH
Q 018699          205 GLCLVDWGRGIDLHLFP---------------------------DNMEFEGDCRTSGFRCIEMQEKKPWKFQVDTYGLCA  257 (351)
Q Consensus       205 ~~~l~Dfg~a~~~~~~~---------------------------~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~  257 (351)
                      .++|+|||++.......                           .........||+.|+|||++.+..++.++|||||||
T Consensus       139 ~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~  218 (350)
T cd05573         139 HIKLADFGLCKKMNKAKDREYYLNDSHNLLFRDNVLVRRRDHKQRRVRANSTVGTPDYIAPEVLRGTPYGLECDWWSLGV  218 (350)
T ss_pred             CEEeecCCCCccCcccCcccccccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCceeeEecch
Confidence            89999999886543221                           001223456899999999999999999999999999


Q ss_pred             HHHHHHhCccccccccCCCCCceeee--cCcchhh--hhHHHHHHHHHHHHhcCCCCCChH-HHHHHHHHHH
Q 018699          258 IVHMMLHNSYMEIEKKASPDGGLVYL--PKLSFKR--YWKVELWKSLFTNLLNMSSGNDKE-VLQNLQKSFQ  324 (351)
Q Consensus       258 il~~l~~g~~p~~~~~~~~~~~~~~~--~~~~~~~--~~~~~~~~~li~~~L~~dP~~R~s-~~e~l~~~~~  324 (351)
                      ++|+|++|..||..............  .....+.  .++ +.+.+||.+||. ||.+|++ +.+++.|||.
T Consensus       219 il~ell~g~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~~-~~~~~li~~ll~-dp~~R~~s~~~ll~hp~~  288 (350)
T cd05573         219 ILYEMLYGFPPFYSDTLQETYNKIINWKESLRFPPDPPVS-PEAIDLICRLLC-DPEDRLGSFEEIKSHPFF  288 (350)
T ss_pred             hhhhhccCCCCCCCCCHHHHHHHHhccCCcccCCCCCCCC-HHHHHHHHHHcc-ChhhcCCCHHHHhcCCCc
Confidence            99999999999976543211000000  1111111  124 789999999997 9999999 9999999874

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the

>cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha

Probab=100.00  E-value=1.5e-42  Score=315.27  Aligned_cols=246  Identities=20%  Similarity=0.240  Sum_probs=192.9

Q ss_pred             EEeeccCceEEEEEEecCCCCceEEEEecCCCCCh---HHHHHHHHHhhhccccccccccceeeecccCeeEEEEEecCC
Q 018699           54 GCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFPW---EFYMYRQLDQRISGRERSSFGFAHRIHLYSDYSILVCDYLSQ  130 (351)
Q Consensus        54 ~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~~~---e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~  130 (351)
                      +.||+|+||.||+|+ +..+|+.||+|++.+....   ................|++++.....+...+..|+||||+++
T Consensus         1 ~~lG~G~~g~V~~~~-~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~~~hp~i~~~~~~~~~~~~~~lv~E~~~~   79 (325)
T cd05594           1 KLLGKGTFGKVILVK-EKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANG   79 (325)
T ss_pred             CeeeeCCCEEEEEEE-ECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCCceEEEEEcCCEEEEEEeCCCC
Confidence            469999999999999 5678999999998754211   111111122234445678888887878888899999999999


Q ss_pred             CCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHH-CCceecCCCCCcEEEeecCCcceeeccCCCCCcccCCeEEe
Q 018699          131 GTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHD-VGIIHGDFKPDNLLIRYARDELTVLDHDRSGPWQDQGLCLV  209 (351)
Q Consensus       131 ~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~-~~i~H~dl~p~Nill~~~~~~~~~~~~~~~~~~~~~~~~l~  209 (351)
                      ++|..++..    +..+++..++.++.||+.||.|||+ .||+||||||+||+++                 .++.++|+
T Consensus        80 ~~L~~~l~~----~~~l~~~~~~~~~~qi~~aL~~lH~~~~ivHrDikp~NIll~-----------------~~~~~kL~  138 (325)
T cd05594          80 GELFFHLSR----ERVFSEDRARFYGAEIVSALDYLHSEKNVVYRDLKLENLMLD-----------------KDGHIKIT  138 (325)
T ss_pred             CcHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHhcCCEEecCCCCCeEEEC-----------------CCCCEEEe
Confidence            999998876    4679999999999999999999997 7999999999999999                 77889999


Q ss_pred             ecCCccccccCCCCccccccccCCCcccceeccCCCCCccchHhHHHHHHHHHHhCccccccccCCCCCceeeecCcchh
Q 018699          210 DWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQEKKPWKFQVDTYGLCAIVHMMLHNSYMEIEKKASPDGGLVYLPKLSFK  289 (351)
Q Consensus       210 Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~  289 (351)
                      |||++....  ..........|++.|+|||++.+..++.++|||||||++|+|++|..||..................++
T Consensus       139 Dfg~~~~~~--~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~tG~~Pf~~~~~~~~~~~i~~~~~~~p  216 (325)
T cd05594         139 DFGLCKEGI--KDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRFP  216 (325)
T ss_pred             cCCCCeecC--CCCcccccccCCcccCCHHHHccCCCCCccccccccceeeeeccCCCCCCCCCHHHHHHHHhcCCCCCC
Confidence            999885321  112223445689999999999988899999999999999999999999975443211111122233344


Q ss_pred             hhhHHHHHHHHHHHHhcCCCCCCh-----HHHHHHHHHHH
Q 018699          290 RYWKVELWKSLFTNLLNMSSGNDK-----EVLQNLQKSFQ  324 (351)
Q Consensus       290 ~~~~~~~~~~li~~~L~~dP~~R~-----s~~e~l~~~~~  324 (351)
                      ...+ +.+.+||.+||++||.+|+     ++.++++|+|.
T Consensus       217 ~~~~-~~~~~li~~~L~~dP~~R~~~~~~~~~~il~h~~~  255 (325)
T cd05594         217 RTLS-PEAKSLLSGLLKKDPKQRLGGGPDDAKEIMQHKFF  255 (325)
T ss_pred             CCCC-HHHHHHHHHHhhcCHHHhCCCCCCCHHHHhcCCCc
Confidence            4445 7899999999999999997     89999999863

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien

>cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase

Probab=100.00  E-value=1.6e-41  Score=303.31  Aligned_cols=251  Identities=20%  Similarity=0.238  Sum_probs=190.8

Q ss_pred             CeeEEEEEEeeccCceEEEEEEecCCCCceEEEEecCCCCCh--HHHHHHHHHhhhccccccccccceeeecccCeeEEE
Q 018699           47 GKKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFPW--EFYMYRQLDQRISGRERSSFGFAHRIHLYSDYSILV  124 (351)
Q Consensus        47 ~~~Y~i~~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~~~--e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv  124 (351)
                      -++|++.+.||.|+||+||+|+ +..+++.||+|++......  .....+++ .......|++++....+....+..++|
T Consensus         4 ~~~y~~~~~lg~G~~g~Vy~~~-~~~~~~~vaiK~~~~~~~~~~~~~~~~E~-~~l~~l~h~niv~~~~~~~~~~~~~lv   81 (288)
T cd07871           4 LETYVKLDKLGEGTYATVFKGR-SKLTENLVALKEIRLEHEEGAPCTAIREV-SLLKNLKHANIVTLHDIIHTERCLTLV   81 (288)
T ss_pred             cccceEeeEEecCCCEEEEEEE-ECCCCCEEEEEEecccccCCcchhHHHHH-HHHHhCCCCCEeeEEEEEcCCCeEEEE
Confidence            3679999999999999999999 5678899999988643221  11122222 233445678888888888888889999


Q ss_pred             EEecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeeccCCCCCcccC
Q 018699          125 CDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSGPWQDQ  204 (351)
Q Consensus       125 ~e~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~~~~~~~~~  204 (351)
                      |||+. ++|.+++...   +..+++..+..++.||+.||+|||++||+||||||+||+++                 .++
T Consensus        82 ~e~~~-~~l~~~l~~~---~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~dlkp~Nil~~-----------------~~~  140 (288)
T cd07871          82 FEYLD-SDLKQYLDNC---GNLMSMHNVKIFMFQLLRGLSYCHKRKILHRDLKPQNLLIN-----------------EKG  140 (288)
T ss_pred             EeCCC-cCHHHHHHhc---CCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEEC-----------------CCC
Confidence            99995 5999888764   45678999999999999999999999999999999999998                 677


Q ss_pred             CeEEeecCCccccccCCCCccccccccCCCcccceeccC-CCCCccchHhHHHHHHHHHHhCccccccccCCCC------
Q 018699          205 GLCLVDWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQEK-KPWKFQVDTYGLCAIVHMMLHNSYMEIEKKASPD------  277 (351)
Q Consensus       205 ~~~l~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~~DiwslG~il~~l~~g~~p~~~~~~~~~------  277 (351)
                      .++|+|||++.....  .........+++.|+|||++.+ ..++.++||||+||++|+|++|.+||........      
T Consensus       141 ~~kl~DfG~~~~~~~--~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~  218 (288)
T cd07871         141 ELKLADFGLARAKSV--PTKTYSNEVVTLWYRPPDVLLGSTEYSTPIDMWGVGCILYEMATGRPMFPGSTVKEELHLIFR  218 (288)
T ss_pred             CEEECcCcceeeccC--CCccccCceecccccChHHhcCCcccCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHH
Confidence            899999998864321  1222334567899999999865 5678999999999999999999999864332100      


Q ss_pred             -------------------CceeeecC--c---chhhhhHHHHHHHHHHHHhcCCCCCChHHHHHHHHHH
Q 018699          278 -------------------GGLVYLPK--L---SFKRYWKVELWKSLFTNLLNMSSGNDKEVLQNLQKSF  323 (351)
Q Consensus       278 -------------------~~~~~~~~--~---~~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~~~~  323 (351)
                                         ........  .   ......+ .++.+||++||.+||.+|||+.|+++|||
T Consensus       219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~dll~~mL~~dp~~R~t~~~~l~hp~  287 (288)
T cd07871         219 LLGTPTEETWPGITSNEEFRSYLFPQYRAQPLINHAPRLD-TDGIDLLSSLLLYETKSRISAEAALRHSY  287 (288)
T ss_pred             HhCCCChHHhhccccchhhhccccCccCCCchHHhCCCCC-HHHHHHHHHhcCcCcccCCCHHHHhcCCC
Confidence                               00000000  0   0001122 67899999999999999999999999986

Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament

>cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C

Probab=100.00  E-value=4.8e-42  Score=312.27  Aligned_cols=246  Identities=18%  Similarity=0.194  Sum_probs=192.0

Q ss_pred             EEeeccCceEEEEEEecCCCCceEEEEecCCCCChHHHH---HHHHHhhh-ccccccccccceeeecccCeeEEEEEecC
Q 018699           54 GCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFPWEFYM---YRQLDQRI-SGRERSSFGFAHRIHLYSDYSILVCDYLS  129 (351)
Q Consensus        54 ~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~~~e~~~---~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~lv~e~~~  129 (351)
                      +.||+|+||.||+|+ +..+++.||+|++.+....+...   +....... ....|++++.....+...+.+|+||||++
T Consensus         1 ~~lG~G~~g~V~~~~-~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~il~~~~~hp~Iv~~~~~~~~~~~~~lv~e~~~   79 (329)
T cd05588           1 RVIGRGSYAKVLLVE-LKKTRRIYAMKVIKKELVNDDEDIDWVQTEKHVFETASNHPFLVGLHSCFQTESRLFFVIEFVS   79 (329)
T ss_pred             CeEeeCCCeEEEEEE-ECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCCCCceEEEEEcCCEEEEEEeCCC
Confidence            469999999999999 56788999999987643222111   11111212 22257888888888888899999999999


Q ss_pred             CCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeeccCCCCCcccCCeEEe
Q 018699          130 QGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSGPWQDQGLCLV  209 (351)
Q Consensus       130 ~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~~~~~~~~~~~~l~  209 (351)
                      +++|.+++..    ...+++..++.++.|++.|+.|||++||+||||||+||+++                 .++.++|+
T Consensus        80 ~g~L~~~~~~----~~~l~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nili~-----------------~~~~~kL~  138 (329)
T cd05588          80 GGDLMFHMQR----QRKLPEEHARFYSAEISLALNFLHERGIIYRDLKLDNVLLD-----------------AEGHIKLT  138 (329)
T ss_pred             CCCHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEEC-----------------CCCCEEEC
Confidence            9999998876    46899999999999999999999999999999999999999                 67889999


Q ss_pred             ecCCccccccCCCCccccccccCCCcccceeccCCCCCccchHhHHHHHHHHHHhCccccccccCCCC---------Cce
Q 018699          210 DWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQEKKPWKFQVDTYGLCAIVHMMLHNSYMEIEKKASPD---------GGL  280 (351)
Q Consensus       210 Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~p~~~~~~~~~---------~~~  280 (351)
                      |||++....  .........+||+.|+|||++.+..++.++|||||||++|+|++|..||........         ...
T Consensus       139 Dfg~~~~~~--~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~  216 (329)
T cd05588         139 DYGMCKEGI--RPGDTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGMSDNPDQNTEDYLFQV  216 (329)
T ss_pred             cCccccccc--cCCCccccccCCccccCHHHHcCCCCCCccceechHHHHHHHHHCCCCcccccccccccccchHHHHHH
Confidence            999885321  122233456789999999999998899999999999999999999999964221110         000


Q ss_pred             eeecCcchhhhhHHHHHHHHHHHHhcCCCCCChH------HHHHHHHHHH
Q 018699          281 VYLPKLSFKRYWKVELWKSLFTNLLNMSSGNDKE------VLQNLQKSFQ  324 (351)
Q Consensus       281 ~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~s------~~e~l~~~~~  324 (351)
                      .......+|...+ ..+.++|.+||+.||.+|++      +.+++.|||.
T Consensus       217 ~~~~~~~~p~~~~-~~~~~li~~~L~~dP~~R~~~~~~~~~~~i~~hp~~  265 (329)
T cd05588         217 ILEKQIRIPRSLS-VKASSVLKGFLNKDPKERLGCHPQTGFRDIKSHPFF  265 (329)
T ss_pred             HHcCCCCCCCCCC-HHHHHHHHHHhccCHHHcCCCCCCCCHHHHhcCCCC
Confidence            1122233444455 78999999999999999997      7899999874

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl

>KOG0589 consensus Serine/threonine protein kinase [General function prediction only]

Probab=100.00  E-value=1.1e-42  Score=312.78  Aligned_cols=256  Identities=16%  Similarity=0.146  Sum_probs=210.4

Q ss_pred             CeeEEEEEEeeccCceEEEEEEecCCCCceEEEEecCCCCChHHHH--HHHHHhhhccccccccccceeeecccCe-eEE
Q 018699           47 GKKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFPWEFYM--YRQLDQRISGRERSSFGFAHRIHLYSDY-SIL  123 (351)
Q Consensus        47 ~~~Y~i~~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~~~e~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~l  123 (351)
                      .++|+.++++|+|+||.++++++ ...+..+|+|.+.-....+...  -.+....+....||+++...+.+..++. ++|
T Consensus         3 m~~Ye~~~~iG~GafG~a~lvrh-k~~~~~~vlK~I~l~~~t~~~r~~A~~E~~lis~~~hP~iv~y~ds~~~~~~~l~I   81 (426)
T KOG0589|consen    3 MDNYEVLRQVGRGAFGSALLVRH-KSDDKLYVLKKINLEKLTEPERRSAIQEMDLLSKLLHPNIVEYKDSFEEDGQLLCI   81 (426)
T ss_pred             cchhhhhhhcCccccchhhhhhh-ccCCceEEEEEEeccccCchhhHHHHHHHHHHHhccCCCeeeeccchhcCCceEEE
Confidence            46899999999999999999994 5666789999876544333222  2222234556788888888888876666 999


Q ss_pred             EEEecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeeccCCCCCccc
Q 018699          124 VCDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSGPWQD  203 (351)
Q Consensus       124 v~e~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~~~~~~~~  203 (351)
                      ||+||+||+|.+.+...+  +..++++.+..|+.|++.|+.|||++.|+|||||+.|||++                 .+
T Consensus        82 vm~Y~eGg~l~~~i~~~k--~~~f~E~~i~~~~~Q~~~av~ylH~~~iLHRDlK~~Niflt-----------------k~  142 (426)
T KOG0589|consen   82 VMEYCEGGDLAQLIKEQK--GVLFPEERILKWFVQILLAVNYLHENRVLHRDLKCANIFLT-----------------KD  142 (426)
T ss_pred             EEeecCCCCHHHHHHHHh--hccccHHHHHHHHHHHHHHHHHHHhhhhhcccchhhhhhcc-----------------cc
Confidence            999999999999998764  57899999999999999999999999999999999999999                 77


Q ss_pred             CCeEEeecCCccccccCCCCccccccccCCCcccceeccCCCCCccchHhHHHHHHHHHHhCccccccccCCCCCceeee
Q 018699          204 QGLCLVDWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQEKKPWKFQVDTYGLCAIVHMMLHNSYMEIEKKASPDGGLVYL  283 (351)
Q Consensus       204 ~~~~l~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~p~~~~~~~~~~~~~~~  283 (351)
                      +.++|+|||+|..+.  ++.....+.+||+.|++||++.+.+|+.++|||||||++|||++-+++|...+-..-...+..
T Consensus       143 ~~VkLgDfGlaK~l~--~~~~~a~tvvGTp~YmcPEil~d~pYn~KSDiWsLGC~~yEm~~lk~aF~a~~m~~Li~ki~~  220 (426)
T KOG0589|consen  143 KKVKLGDFGLAKILN--PEDSLASTVVGTPYYMCPEILSDIPYNEKSDIWSLGCCLYEMCTLKPAFKASNMSELILKINR  220 (426)
T ss_pred             CceeecchhhhhhcC--CchhhhheecCCCcccCHHHhCCCCCCccCcchhhcchHHHHHhcccccCccchHHHHHHHhh
Confidence            779999999998654  222345677899999999999999999999999999999999999999987765422111222


Q ss_pred             -cCcchhhhhHHHHHHHHHHHHhcCCCCCChHHHHHHHHHHHH
Q 018699          284 -PKLSFKRYWKVELWKSLFTNLLNMSSGNDKEVLQNLQKSFQD  325 (351)
Q Consensus       284 -~~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~~~~~~  325 (351)
                       .-.++|..++ .+++.+|+.||..+|..||++.++|.+|...
T Consensus       221 ~~~~Plp~~ys-~el~~lv~~~l~~~P~~RPsa~~LL~~P~l~  262 (426)
T KOG0589|consen  221 GLYSPLPSMYS-SELRSLVKSMLRKNPEHRPSALELLRRPHLL  262 (426)
T ss_pred             ccCCCCCcccc-HHHHHHHHHHhhcCCccCCCHHHHhhChhhh
Confidence             2356777777 8999999999999999999999999987543

>cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta

Probab=100.00  E-value=5.3e-42  Score=310.28  Aligned_cols=246  Identities=20%  Similarity=0.223  Sum_probs=189.6

Q ss_pred             EEeeccCceEEEEEEecCCCCceEEEEecCCCCCh---HHH-HHHHHHhhhccccccccccceeeecccCeeEEEEEecC
Q 018699           54 GCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFPW---EFY-MYRQLDQRISGRERSSFGFAHRIHLYSDYSILVCDYLS  129 (351)
Q Consensus        54 ~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~~~---e~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~  129 (351)
                      +.||+|+||+||+|+ ...+++.||+|++......   +.. ...+.........|++++........++..|+||||++
T Consensus         1 ~~lG~G~~g~Vy~~~-~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~i~~~~~~~~~~~~~~lv~e~~~   79 (316)
T cd05592           1 KVLGKGSFGKVMLAE-LKGTNEFFAIKALKKDVVLEDDDVECTMVERRVLALAWEHPFLTHLFCTFQTKEHLFFVMEYLN   79 (316)
T ss_pred             CeeeeCCCeEEEEEE-ECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhccCCCCccceeeEEEcCCEEEEEEcCCC
Confidence            469999999999999 5677899999998754211   111 11111111123467888888888878889999999999


Q ss_pred             CCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeeccCCCCCcccCCeEEe
Q 018699          130 QGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSGPWQDQGLCLV  209 (351)
Q Consensus       130 ~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~~~~~~~~~~~~l~  209 (351)
                      +++|..++..    ...+++..+..++.|++.||.|||++||+||||||+||+++                 .++.++|+
T Consensus        80 gg~L~~~~~~----~~~~~~~~~~~~~~qi~~al~~LH~~~ivH~dlkp~Nill~-----------------~~~~~kL~  138 (316)
T cd05592          80 GGDLMFHIQS----SGRFDEARARFYAAEIICGLQFLHKKGIIYRDLKLDNVLLD-----------------KDGHIKIA  138 (316)
T ss_pred             CCcHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHCCEEeCCCCHHHeEEC-----------------CCCCEEEc
Confidence            9999999876    46799999999999999999999999999999999999999                 67789999


Q ss_pred             ecCCccccccCCCCccccccccCCCcccceeccCCCCCccchHhHHHHHHHHHHhCccccccccCCCCCceeeecCcchh
Q 018699          210 DWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQEKKPWKFQVDTYGLCAIVHMMLHNSYMEIEKKASPDGGLVYLPKLSFK  289 (351)
Q Consensus       210 Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~  289 (351)
                      |||++.....  ........+||+.|+|||++.+..++.++|||||||++|+|++|..||..................++
T Consensus       139 Dfg~a~~~~~--~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~G~~Pf~~~~~~~~~~~i~~~~~~~~  216 (316)
T cd05592         139 DFGMCKENMN--GEGKASTFCGTPDYIAPEILKGQKYNESVDWWSFGVLLYEMLIGQSPFHGEDEDELFDSILNDRPHFP  216 (316)
T ss_pred             cCcCCeECCC--CCCccccccCCccccCHHHHcCCCCCCcccchhHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCCCC
Confidence            9998864221  12233455789999999999988899999999999999999999999975432211111111223334


Q ss_pred             hhhHHHHHHHHHHHHhcCCCCCChHHH-HHHHHHHH
Q 018699          290 RYWKVELWKSLFTNLLNMSSGNDKEVL-QNLQKSFQ  324 (351)
Q Consensus       290 ~~~~~~~~~~li~~~L~~dP~~R~s~~-e~l~~~~~  324 (351)
                      ...+ ..+.+||.+||+.||.+||++. +++.|+|.
T Consensus       217 ~~~~-~~~~~ll~~~l~~~P~~R~~~~~~l~~h~~~  251 (316)
T cd05592         217 RWIS-KEAKDCLSKLFERDPTKRLGVDGDIRQHPFF  251 (316)
T ss_pred             CCCC-HHHHHHHHHHccCCHHHcCCChHHHHcCccc
Confidence            4444 7889999999999999999876 56678763

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp

>KOG1989 consensus ARK protein kinase family [Signal transduction mechanisms]

Probab=100.00  E-value=6.4e-41  Score=317.99  Aligned_cols=279  Identities=19%  Similarity=0.203  Sum_probs=212.2

Q ss_pred             ccccccccccccccCCCcceEEEEcCeeEEEEEEeeccCceEEEEEEecCCCCceEEEEecCCCCChHHHHHH-HHHhhh
Q 018699           22 NKVYSGKVALSSLNNSSRNKTIEIGGKKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFPWEFYMYR-QLDQRI  100 (351)
Q Consensus        22 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~Y~i~~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~~~e~~~~~-~~~~~~  100 (351)
                      +..+..............+..++|++.+++|.+.|..|||+.||+|. +...|..||+|.+........+..+ ++.-.-
T Consensus        11 ~~~~~~~~~~~~~~~~~~G~~~~Vg~~~v~V~~vLAEGGFa~VYla~-~~~~~~~~AlKrm~~~de~~L~~v~~EI~~MK   89 (738)
T KOG1989|consen   11 AGGGSSKGSSPQSENYFVGQTFTVGSHRVTVEKVLAEGGFAQVYLAQ-DVKGGKKYALKRMYVNDEEALNAVKREIDIMK   89 (738)
T ss_pred             cCCCCCCCCCcccccCCCceEEEECCEEEEEEEEEccCCcEEEEEEE-ecCCCceeeeeeeecCCHHHHHHHHHHHHHHH
Confidence            33344444444556666789999999999999999999999999999 4566588999986544332222222 222222


Q ss_pred             ccccccccccceee-ec---c---cCeeEEEEEecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCC--c
Q 018699          101 SGRERSSFGFAHRI-HL---Y---SDYSILVCDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVG--I  171 (351)
Q Consensus       101 ~~~~~~~~~~~~~~-~~---~---~~~~~lv~e~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~--i  171 (351)
                      ....|++++...+- ..   .   .-.++++||||.||+|-++|+.+..  ..|++.+++.|+.++++|+++||...  |
T Consensus        90 ~L~gh~nIV~yidss~~~~~~~~~~~EvllLmEyC~gg~Lvd~mn~Rlq--~~lte~eVLkIf~dv~~AVa~mH~~~pPi  167 (738)
T KOG1989|consen   90 LLSGHKNIVSYIDSSAINRSSNNGVWEVLLLMEYCKGGSLVDFMNTRLQ--TRLTEDEVLKIFYDVCEAVAAMHYLKPPI  167 (738)
T ss_pred             HhcCCCceeeEeccccccccCCCceeEEEeehhhccCCcHHHHHHHHHh--ccCChHHHHHHHHHHHHHHHHHhcCCCcc
Confidence            23346666665541 11   1   1356899999999999999998763  45999999999999999999999986  9


Q ss_pred             eecCCCCCcEEEeecCCcceeeccCCCCCcccCCeEEeecCCccccccCCCCcc-c------cccccCCCcccceec---
Q 018699          172 IHGDFKPDNLLIRYARDELTVLDHDRSGPWQDQGLCLVDWGRGIDLHLFPDNME-F------EGDCRTSGFRCIEMQ---  241 (351)
Q Consensus       172 ~H~dl~p~Nill~~~~~~~~~~~~~~~~~~~~~~~~l~Dfg~a~~~~~~~~~~~-~------~~~~g~~~y~aPE~~---  241 (351)
                      ||||||-+||||.                 .++..||||||.|......+.... .      ....-|+.|+|||++   
T Consensus       168 IHRDLKiENvLls-----------------~~g~~KLCDFGSatt~~~~~~~~~e~~~ve~eI~k~TTp~YRsPEMIDly  230 (738)
T KOG1989|consen  168 IHRDLKIENVLLS-----------------ADGNYKLCDFGSATTKILSPTSAQEVNYVEEEIEKYTTPQYRSPEMIDLY  230 (738)
T ss_pred             chhhhhhhheEEc-----------------CCCCEEeCcccccccccCCCccHHHHHHHHHHHHhhCCccccChHHHhhh
Confidence            9999999999999                 788899999998865433331111 0      112358999999987   


Q ss_pred             cCCCCCccchHhHHHHHHHHHHhCcccccccc--CCCCCceeeecCcchhhhhHHHHHHHHHHHHhcCCCCCChHHHHHH
Q 018699          242 EKKPWKFQVDTYGLCAIVHMMLHNSYMEIEKK--ASPDGGLVYLPKLSFKRYWKVELWKSLFTNLLNMSSGNDKEVLQNL  319 (351)
Q Consensus       242 ~~~~~~~~~DiwslG~il~~l~~g~~p~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l  319 (351)
                      .+.+++.++|||+|||+||-|++...||....  ....+.|.+++...+.     +.+++||+.||++||++||++.|++
T Consensus       231 sg~pI~eKsDIWALGclLYkLCy~t~PFe~sg~laIlng~Y~~P~~p~ys-----~~l~~LI~~mL~~nP~~RPnI~Qv~  305 (738)
T KOG1989|consen  231 SGLPIGEKSDIWALGCLLYKLCYFTTPFEESGKLAILNGNYSFPPFPNYS-----DRLKDLIRTMLQPNPDERPNIYQVL  305 (738)
T ss_pred             cCCCCcchhHHHHHHHHHHHHHHhCCCcCcCcceeEEeccccCCCCccHH-----HHHHHHHHHHhccCcccCCCHHHHH
Confidence            67889999999999999999999999998653  3345666666655544     7899999999999999999999999


Q ss_pred             HHHHHH
Q 018699          320 QKSFQD  325 (351)
Q Consensus       320 ~~~~~~  325 (351)
                      .+.++-
T Consensus       306 ~~~~~l  311 (738)
T KOG1989|consen  306 EEIFEL  311 (738)
T ss_pred             HHHHHH
Confidence            987654

>cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2

Probab=100.00  E-value=3.2e-41  Score=307.14  Aligned_cols=256  Identities=14%  Similarity=0.119  Sum_probs=199.0

Q ss_pred             EcCeeEEEEEEeeccCceEEEEEEecCCCCceEEEEecCCCCChH-HHHHHHHHhhhccccccccccceeeecccCeeEE
Q 018699           45 IGGKKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFPWE-FYMYRQLDQRISGRERSSFGFAHRIHLYSDYSIL  123 (351)
Q Consensus        45 i~~~~Y~i~~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~~~e-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  123 (351)
                      +..++|++.+.||+|+||.||+|+ +..++..||+|++......+ ...+......+....|++++....++..++..++
T Consensus         2 l~~~~y~~~~~lg~G~~g~V~~~~-~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l   80 (331)
T cd06649           2 LKDDDFERISELGAGNGGVVTKVQ-HKPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISI   80 (331)
T ss_pred             CCcccceEEEeecCCCCEEEEEEE-ECCCCcEEEEEEeecccCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEE
Confidence            456899999999999999999999 57788999999987653322 1122222233445567888888888888889999


Q ss_pred             EEEecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHC-CceecCCCCCcEEEeecCCcceeeccCCCCCcc
Q 018699          124 VCDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDV-GIIHGDFKPDNLLIRYARDELTVLDHDRSGPWQ  202 (351)
Q Consensus       124 v~e~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~-~i~H~dl~p~Nill~~~~~~~~~~~~~~~~~~~  202 (351)
                      ||||+++++|.+++..    ...+++..+..++.|++.|+.|||+. +|+|+||||+||+++                 .
T Consensus        81 v~e~~~~~~L~~~l~~----~~~~~~~~~~~~~~~i~~~l~~lH~~~~ivH~dlkp~Nil~~-----------------~  139 (331)
T cd06649          81 CMEHMDGGSLDQVLKE----AKRIPEEILGKVSIAVLRGLAYLREKHQIMHRDVKPSNILVN-----------------S  139 (331)
T ss_pred             EeecCCCCcHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHhhcCCEEcCCCChhhEEEc-----------------C
Confidence            9999999999999987    46789999999999999999999986 699999999999999                 6


Q ss_pred             cCCeEEeecCCccccccCCCCccccccccCCCcccceeccCCCCCccchHhHHHHHHHHHHhCccccccccCCC------
Q 018699          203 DQGLCLVDWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQEKKPWKFQVDTYGLCAIVHMMLHNSYMEIEKKASP------  276 (351)
Q Consensus       203 ~~~~~l~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~p~~~~~~~~------  276 (351)
                      ++.++|+|||++....    ........|++.|+|||++.+..++.++|||||||++|+|++|..||.......      
T Consensus       140 ~~~~kl~Dfg~~~~~~----~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~~~~~  215 (331)
T cd06649         140 RGEIKLCDFGVSGQLI----DSMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVELAIGRYPIPPPDAKELEAIFG  215 (331)
T ss_pred             CCcEEEccCccccccc----ccccccCCCCcCcCCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHhc
Confidence            7789999999886432    122234568999999999998889999999999999999999999985322100      


Q ss_pred             -------CCce---e-------------------------------eecCcchhh-hhHHHHHHHHHHHHhcCCCCCChH
Q 018699          277 -------DGGL---V-------------------------------YLPKLSFKR-YWKVELWKSLFTNLLNMSSGNDKE  314 (351)
Q Consensus       277 -------~~~~---~-------------------------------~~~~~~~~~-~~~~~~~~~li~~~L~~dP~~R~s  314 (351)
                             ....   .                               ....+..+. ..+ +.+++||.+||..||++||+
T Consensus       216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~l~~li~~~L~~~P~~Rpt  294 (331)
T cd06649         216 RPVVDGEEGEPHSISPRPRPPGRPVSGHGMDSRPAMAIFELLDYIVNEPPPKLPNGVFT-PDFQEFVNKCLIKNPAERAD  294 (331)
T ss_pred             ccccccccCCccccCcccccccccccccccccccchhHHHHHHHHHhCCCcCCCCcccc-HHHHHHHHHHccCCcccCCC
Confidence                   0000   0                               000001111 122 67899999999999999999


Q ss_pred             HHHHHHHHHHHHH
Q 018699          315 VLQNLQKSFQDYL  327 (351)
Q Consensus       315 ~~e~l~~~~~~~~  327 (351)
                      +.+++.|+|..-.
T Consensus       295 ~~ell~h~~~~~~  307 (331)
T cd06649         295 LKMLMNHTFIKRS  307 (331)
T ss_pred             HHHHhcChHHhhc
Confidence            9999999875533

Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst

>cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon

Probab=100.00  E-value=4.8e-42  Score=311.35  Aligned_cols=246  Identities=17%  Similarity=0.182  Sum_probs=191.5

Q ss_pred             EEeeccCceEEEEEEecCCCCceEEEEecCCCCC---hHHHHHHHHHhhh-ccccccccccceeeecccCeeEEEEEecC
Q 018699           54 GCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFP---WEFYMYRQLDQRI-SGRERSSFGFAHRIHLYSDYSILVCDYLS  129 (351)
Q Consensus        54 ~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~~---~e~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~lv~e~~~  129 (351)
                      +.||+|+||.||+|+ +..+++.||+|++.+...   ............+ ....|+++......+...+..|+||||++
T Consensus         1 ~~lG~G~~g~Vy~~~-~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~hp~i~~~~~~~~~~~~~~lv~E~~~   79 (321)
T cd05591           1 KVLGKGSFGKVMLAE-LKGTDEVYAIKVLKKDVILQDDDVDCTMTEKRILALAAKHPFLTALHCCFQTKDRLFFVMEYVN   79 (321)
T ss_pred             CccccCCCeEEEEEE-ECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCCeEEEEEeCCC
Confidence            469999999999999 567789999999875321   1111111111111 12367788888888888899999999999


Q ss_pred             CCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeeccCCCCCcccCCeEEe
Q 018699          130 QGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSGPWQDQGLCLV  209 (351)
Q Consensus       130 ~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~~~~~~~~~~~~l~  209 (351)
                      +++|...+..    ...+++..+..++.||+.||.|||++||+||||||+||+++                 .++.++|+
T Consensus        80 ~~~L~~~l~~----~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDikp~Nill~-----------------~~~~~kL~  138 (321)
T cd05591          80 GGDLMFQIQR----SRKFDEPRSRFYAAEVTLALMFLHRHGVIYRDLKLDNILLD-----------------AEGHCKLA  138 (321)
T ss_pred             CCcHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEEC-----------------CCCCEEEe
Confidence            9999998876    46789999999999999999999999999999999999999                 77889999


Q ss_pred             ecCCccccccCCCCccccccccCCCcccceeccCCCCCccchHhHHHHHHHHHHhCccccccccCCCCCceeeecCcchh
Q 018699          210 DWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQEKKPWKFQVDTYGLCAIVHMMLHNSYMEIEKKASPDGGLVYLPKLSFK  289 (351)
Q Consensus       210 Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~  289 (351)
                      |||++....  ..........|++.|+|||++.+..++.++|||||||++|+|++|..||...................|
T Consensus       139 Dfg~~~~~~--~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~tg~~Pf~~~~~~~~~~~i~~~~~~~p  216 (321)
T cd05591         139 DFGMCKEGI--LNGVTTTTFCGTPDYIAPEILQELEYGPSVDWWALGVLMYEMMAGQPPFEADNEDDLFESILHDDVLYP  216 (321)
T ss_pred             ecccceecc--cCCccccccccCccccCHHHHcCCCCCCccceechhHHHHHHhcCCCCCCCCCHHHHHHHHHcCCCCCC
Confidence            999886421  122223445789999999999988899999999999999999999999976543211111112222333


Q ss_pred             hhhHHHHHHHHHHHHhcCCCCCCh-------HHHHHHHHHHH
Q 018699          290 RYWKVELWKSLFTNLLNMSSGNDK-------EVLQNLQKSFQ  324 (351)
Q Consensus       290 ~~~~~~~~~~li~~~L~~dP~~R~-------s~~e~l~~~~~  324 (351)
                      ...+ ..+.+||.+||++||++|+       ++.+++.|||.
T Consensus       217 ~~~~-~~~~~ll~~~L~~dp~~R~~~~~~~~~~~~~~~hp~~  257 (321)
T cd05591         217 VWLS-KEAVSILKAFMTKNPNKRLGCVASQGGEDAIKQHPFF  257 (321)
T ss_pred             CCCC-HHHHHHHHHHhccCHHHcCCCCCCCCCHHHHhcCCcc
Confidence            3344 7899999999999999999       89999999864

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to

>cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha

Probab=100.00  E-value=9.5e-42  Score=309.55  Aligned_cols=251  Identities=18%  Similarity=0.197  Sum_probs=192.3

Q ss_pred             eEEEEEEeeccCceEEEEEEecCCCCceEEEEecCCCCCh---HHH-HHHHHHhhhccccccccccceeeecccCeeEEE
Q 018699           49 KYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFPW---EFY-MYRQLDQRISGRERSSFGFAHRIHLYSDYSILV  124 (351)
Q Consensus        49 ~Y~i~~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~~~---e~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv  124 (351)
                      +|++.+.||+|+||+||+|. +..+++.||+|++.+....   ... ...+.........++++......+...+..|+|
T Consensus         1 ~f~~~~~lg~G~~g~Vy~~~-~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv   79 (323)
T cd05615           1 DFNFLMVLGKGSFGKVMLAE-RKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALQDKPPFLTQLHSCFQTVDRLYFV   79 (323)
T ss_pred             CceEEEEEEecCCeEEEEEE-ECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCchhheeeEEecCCEEEEE
Confidence            47889999999999999999 5678899999998753211   111 111111111222445666677777778899999


Q ss_pred             EEecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeeccCCCCCcccC
Q 018699          125 CDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSGPWQDQ  204 (351)
Q Consensus       125 ~e~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~~~~~~~~~  204 (351)
                      |||+++++|.+++..    ...+++..+..++.|++.|+.|||++||+||||||+||+++                 .++
T Consensus        80 ~Ey~~~g~L~~~i~~----~~~l~~~~~~~i~~qi~~al~~lH~~~ivHrDikp~Nill~-----------------~~~  138 (323)
T cd05615          80 MEYVNGGDLMYHIQQ----VGKFKEPQAVFYAAEISVGLFFLHRRGIIYRDLKLDNVMLD-----------------SEG  138 (323)
T ss_pred             EcCCCCCcHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEEC-----------------CCC
Confidence            999999999999876    46799999999999999999999999999999999999999                 778


Q ss_pred             CeEEeecCCccccccCCCCccccccccCCCcccceeccCCCCCccchHhHHHHHHHHHHhCccccccccCCCCCceeeec
Q 018699          205 GLCLVDWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQEKKPWKFQVDTYGLCAIVHMMLHNSYMEIEKKASPDGGLVYLP  284 (351)
Q Consensus       205 ~~~l~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~p~~~~~~~~~~~~~~~~  284 (351)
                      .++|+|||++....  ..........||+.|+|||++.+..++.++||||+||++|+|++|..||...............
T Consensus       139 ~ikL~Dfg~~~~~~--~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~pf~~~~~~~~~~~i~~~  216 (323)
T cd05615         139 HIKIADFGMCKEHM--VDGVTTRTFCGTPDYIAPEIIAYQPYGKSVDWWAYGVLLYEMLAGQPPFDGEDEDELFQSIMEH  216 (323)
T ss_pred             CEEEeccccccccC--CCCccccCccCCccccCHHHHcCCCCCCccchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHhC
Confidence            89999999886422  1122234456899999999999888999999999999999999999999765432111111122


Q ss_pred             CcchhhhhHHHHHHHHHHHHhcCCCCCChHH-----HHHHHHHHH
Q 018699          285 KLSFKRYWKVELWKSLFTNLLNMSSGNDKEV-----LQNLQKSFQ  324 (351)
Q Consensus       285 ~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~-----~e~l~~~~~  324 (351)
                      ...+|...+ ..+.+++.+||++||.+|+++     .+++.|+|.
T Consensus       217 ~~~~p~~~~-~~~~~li~~~l~~~p~~R~~~~~~~~~~i~~h~~f  260 (323)
T cd05615         217 NVSYPKSLS-KEAVSICKGLMTKHPSKRLGCGPEGERDIREHAFF  260 (323)
T ss_pred             CCCCCccCC-HHHHHHHHHHcccCHhhCCCCCCCCHHHHhcCccc
Confidence            223344444 788999999999999999974     677778763

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a

>cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase

Probab=100.00  E-value=4.6e-42  Score=311.72  Aligned_cols=245  Identities=21%  Similarity=0.227  Sum_probs=191.1

Q ss_pred             EEeeccCceEEEEEEecCCCCceEEEEecCCCCCh---H-HHHHHHHHhhhccccccccccceeeecccCeeEEEEEecC
Q 018699           54 GCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFPW---E-FYMYRQLDQRISGRERSSFGFAHRIHLYSDYSILVCDYLS  129 (351)
Q Consensus        54 ~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~~~---e-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~  129 (351)
                      +.||+|+||+||+|+ +..+|+.||+|++.+....   + ...+.+.........|++++.....+...+..|+||||++
T Consensus         1 ~~lg~G~~g~V~~~~-~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~~l~hp~iv~~~~~~~~~~~~~lv~e~~~   79 (323)
T cd05575           1 KVIGKGSFGKVLLAK-HKADGKFYAVKVLQKKAILKKKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTADKLYFVLDYVN   79 (323)
T ss_pred             CeeeeCCCeEEEEEE-ECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhhCCCCCCCCeeEEEEeCCEEEEEEcCCC
Confidence            469999999999999 5778999999998753211   1 1222222223345678888888888888889999999999


Q ss_pred             CCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeeccCCCCCcccCCeEEe
Q 018699          130 QGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSGPWQDQGLCLV  209 (351)
Q Consensus       130 ~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~~~~~~~~~~~~l~  209 (351)
                      +++|..++..    +..+++..+..++.||+.||.|||++||+||||||+||+++                 .++.++|+
T Consensus        80 ~g~L~~~l~~----~~~~~~~~~~~~~~qi~~~l~~lH~~givH~dikp~NIll~-----------------~~~~~kl~  138 (323)
T cd05575          80 GGELFFHLQR----ERSFPEPRARFYAAEIASALGYLHSLNIIYRDLKPENILLD-----------------SQGHVVLT  138 (323)
T ss_pred             CCCHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCCHHHeEEC-----------------CCCcEEEe
Confidence            9999999876    56899999999999999999999999999999999999998                 67889999


Q ss_pred             ecCCccccccCCCCccccccccCCCcccceeccCCCCCccchHhHHHHHHHHHHhCccccccccCCCCCceeeecCcchh
Q 018699          210 DWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQEKKPWKFQVDTYGLCAIVHMMLHNSYMEIEKKASPDGGLVYLPKLSFK  289 (351)
Q Consensus       210 Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~  289 (351)
                      |||++....  ..........|++.|+|||++.+..++.++|||||||++|+|++|..||...................+
T Consensus       139 Dfg~~~~~~--~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~  216 (323)
T cd05575         139 DFGLCKEGI--EHSKTTSTFCGTPEYLAPEVLRKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRDTAEMYDNILNKPLRLK  216 (323)
T ss_pred             ccCCCcccc--cCCCccccccCChhhcChhhhcCCCCCccccccccchhhhhhhcCCCCCCCCCHHHHHHHHHcCCCCCC
Confidence            999886421  122233445789999999999998999999999999999999999999975432211011111112222


Q ss_pred             hhhHHHHHHHHHHHHhcCCCCCChHH----HHHHHHHH
Q 018699          290 RYWKVELWKSLFTNLLNMSSGNDKEV----LQNLQKSF  323 (351)
Q Consensus       290 ~~~~~~~~~~li~~~L~~dP~~R~s~----~e~l~~~~  323 (351)
                      ...+ ..+.++|.+||+.||.+||++    .+++.|+|
T Consensus       217 ~~~~-~~~~~li~~~l~~~p~~R~~~~~~~~~il~~~~  253 (323)
T cd05575         217 PNIS-VSARHLLEGLLQKDRTKRLGAKDDFLEIKNHVF  253 (323)
T ss_pred             CCCC-HHHHHHHHHHhhcCHHhCCCCCCCHHHHHcCCC
Confidence            2233 789999999999999999988    58888876

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr

>cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta

Probab=100.00  E-value=7.4e-42  Score=309.26  Aligned_cols=246  Identities=19%  Similarity=0.205  Sum_probs=190.1

Q ss_pred             EEeeccCceEEEEEEecCCCCceEEEEecCCCCC---hHHH-HHHHHHhhhccccccccccceeeecccCeeEEEEEecC
Q 018699           54 GCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFP---WEFY-MYRQLDQRISGRERSSFGFAHRIHLYSDYSILVCDYLS  129 (351)
Q Consensus        54 ~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~~---~e~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~  129 (351)
                      +.||+|+||+||+|+ +..+++.||+|++.....   .... ...+.........|++++.....+...+..|+||||++
T Consensus         1 ~~lG~G~~g~Vy~~~-~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~ey~~   79 (316)
T cd05619           1 KMLGKGSFGKVFLAE-LKGTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHLYCTFQTKENLFFVMEYLN   79 (316)
T ss_pred             CeeeeCCCEEEEEEE-ECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCcCcceEEEEEeCCEEEEEEeCCC
Confidence            469999999999999 567789999999875421   1111 11111111123467888888888888889999999999


Q ss_pred             CCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeeccCCCCCcccCCeEEe
Q 018699          130 QGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSGPWQDQGLCLV  209 (351)
Q Consensus       130 ~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~~~~~~~~~~~~l~  209 (351)
                      +++|.+++..    ...+++..+..++.|++.|+.|||++||+||||||+||+++                 .++.++|+
T Consensus        80 ~g~L~~~l~~----~~~~~~~~~~~~~~qi~~al~~LH~~~ivHrdikp~Nil~~-----------------~~~~~kl~  138 (316)
T cd05619          80 GGDLMFHIQS----CHKFDLPRATFYAAEIICGLQFLHSKGIVYRDLKLDNILLD-----------------TDGHIKIA  138 (316)
T ss_pred             CCcHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHhCCeEeCCCCHHHEEEC-----------------CCCCEEEc
Confidence            9999999876    46788999999999999999999999999999999999999                 67789999


Q ss_pred             ecCCccccccCCCCccccccccCCCcccceeccCCCCCccchHhHHHHHHHHHHhCccccccccCCCCCceeeecCcchh
Q 018699          210 DWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQEKKPWKFQVDTYGLCAIVHMMLHNSYMEIEKKASPDGGLVYLPKLSFK  289 (351)
Q Consensus       210 Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~  289 (351)
                      |||++....  ..........||+.|+|||++.+..++.++||||+||++|+|++|..||..................++
T Consensus       139 Dfg~~~~~~--~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~~pf~~~~~~~~~~~i~~~~~~~~  216 (316)
T cd05619         139 DFGMCKENM--LGDAKTCTFCGTPDYIAPEILLGQKYNTSVDWWSFGVLLYEMLIGQSPFHGHDEEELFQSIRMDNPCYP  216 (316)
T ss_pred             cCCcceECC--CCCCceeeecCCccccCHHHHcCCCCCchhhhhhHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCC
Confidence            999886421  112223455789999999999988899999999999999999999999975432211111111222334


Q ss_pred             hhhHHHHHHHHHHHHhcCCCCCChHHH-HHHHHHHH
Q 018699          290 RYWKVELWKSLFTNLLNMSSGNDKEVL-QNLQKSFQ  324 (351)
Q Consensus       290 ~~~~~~~~~~li~~~L~~dP~~R~s~~-e~l~~~~~  324 (351)
                      ..++ ..+++||.+||..||++|+++. +++.|||.
T Consensus       217 ~~~~-~~~~~li~~~l~~~P~~R~~~~~~l~~h~~~  251 (316)
T cd05619         217 RWLT-REAKDILVKLFVREPERRLGVKGDIRQHPFF  251 (316)
T ss_pred             ccCC-HHHHHHHHHHhccCHhhcCCChHHHHcCccc
Confidence            4444 7899999999999999999996 77788763

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in

>cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2

Probab=100.00  E-value=2e-41  Score=308.78  Aligned_cols=253  Identities=18%  Similarity=0.205  Sum_probs=192.1

Q ss_pred             eEEEEEEeeccCceEEEEEEec--CCCCceEEEEecCCCCCh----HHHHHHHHHhhhccc-cccccccceeeecccCee
Q 018699           49 KYQIKGCAGQGGFAKVFKAYVN--GDPEDVVALKIQKPAFPW----EFYMYRQLDQRISGR-ERSSFGFAHRIHLYSDYS  121 (351)
Q Consensus        49 ~Y~i~~~lg~G~~g~V~~a~~~--~~~~~~vaiK~~~~~~~~----e~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~  121 (351)
                      +|++.+.||+|+||+||+|++.  ..+++.||+|++.+....    ...........+... .++++......+...+..
T Consensus         1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~   80 (332)
T cd05614           1 NFELLKVLGTGAYGKVFLVRKVTGHDTGKLYAMKVLQKAALVQKAKTVEHTRTERNVLEHVRQSPFLVTLHYAFQTEAKL   80 (332)
T ss_pred             CceEEEEEeecCCEEEEEEEEcccCCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHHhccCCCCcccEEEEEecCCEE
Confidence            4899999999999999999852  346899999998643211    111111111112222 467777777777788899


Q ss_pred             EEEEEecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeeccCCCCCc
Q 018699          122 ILVCDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSGPW  201 (351)
Q Consensus       122 ~lv~e~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~~~~~~  201 (351)
                      ++||||+++++|.+++..    +..+++..+..++.||+.||.|||++||+||||||+||+++                 
T Consensus        81 ~lv~e~~~~g~L~~~l~~----~~~~~~~~~~~~~~qi~~~l~~lH~~~ivHrDlkp~Nili~-----------------  139 (332)
T cd05614          81 HLILDYVSGGEMFTHLYQ----RDNFSEDEVRFYSGEIILALEHLHKLGIVYRDIKLENILLD-----------------  139 (332)
T ss_pred             EEEEeCCCCCcHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCHHHeEEC-----------------
Confidence            999999999999999876    46799999999999999999999999999999999999999                 


Q ss_pred             ccCCeEEeecCCccccccCCCCccccccccCCCcccceeccCC-CCCccchHhHHHHHHHHHHhCccccccccCCCCC--
Q 018699          202 QDQGLCLVDWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQEKK-PWKFQVDTYGLCAIVHMMLHNSYMEIEKKASPDG--  278 (351)
Q Consensus       202 ~~~~~~l~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~-~~~~~~DiwslG~il~~l~~g~~p~~~~~~~~~~--  278 (351)
                      .++.++|+|||++...... .........||+.|+|||++.+. .++.++|||||||++|+|++|..||.........  
T Consensus       140 ~~~~~kl~DfG~~~~~~~~-~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~  218 (332)
T cd05614         140 SEGHVVLTDFGLSKEFLSE-EKERTYSFCGTIEYMAPEIIRGKGGHGKAVDWWSLGILIFELLTGASPFTLEGERNTQSE  218 (332)
T ss_pred             CCCCEEEeeCcCCcccccc-CCCccccccCCccccCHHHhcCCCCCCCccccccchhhhhhhhcCCCCCCCCCCCCCHHH
Confidence            6778999999998643211 11222345789999999998765 4788999999999999999999999644322110  


Q ss_pred             --ceeeecCcchhhhhHHHHHHHHHHHHhcCCCCCCh-----HHHHHHHHHHH
Q 018699          279 --GLVYLPKLSFKRYWKVELWKSLFTNLLNMSSGNDK-----EVLQNLQKSFQ  324 (351)
Q Consensus       279 --~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~-----s~~e~l~~~~~  324 (351)
                        .........++...+ ..++++|.+||+.||++||     ++.+++.|+|.
T Consensus       219 ~~~~~~~~~~~~~~~~~-~~~~~li~~~l~~dp~~R~~~~~~~~~~~l~h~~~  270 (332)
T cd05614         219 VSRRILKCDPPFPSFIG-PEAQDLLHKLLRKDPKKRLGAGPQGASEIKEHPFF  270 (332)
T ss_pred             HHHHHhcCCCCCCCCCC-HHHHHHHHHHcCCCHHHcCCCCCCCHHHHHcCCCc
Confidence              001112223333444 7899999999999999999     78899999863

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph

>cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1

Probab=100.00  E-value=3.3e-41  Score=310.89  Aligned_cols=253  Identities=19%  Similarity=0.165  Sum_probs=192.5

Q ss_pred             eeEEEEEEeeccCceEEEEEEecCCCCceEEEEecCCCCChHHH---HHHHHHhhhccccccccccceeeecccCeeEEE
Q 018699           48 KKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFPWEFY---MYRQLDQRISGRERSSFGFAHRIHLYSDYSILV  124 (351)
Q Consensus        48 ~~Y~i~~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~~~e~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv  124 (351)
                      ++|++.+.||+|+||+||+|. +..+++.||+|++.+....+..   .+...........+++++.....+.....+|+|
T Consensus         1 ~~y~~~~~LG~G~~g~V~~~~-~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~~~~~~iv~~~~~~~~~~~~~lv   79 (363)
T cd05628           1 EDFESLKVIGRGAFGEVRLVQ-KKDTGHVYAMKILRKADMLEKEQVGHIRAERDILVEADSLWVVKMFYSFQDKLNLYLI   79 (363)
T ss_pred             CCceEeEEEEeCCCEEEEEEE-ECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHhCCCCCcceEEEEEecCCeEEEE
Confidence            479999999999999999999 5678899999998754322211   222222333445677788888878888899999


Q ss_pred             EEecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeeccCCCCCcccC
Q 018699          125 CDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSGPWQDQ  204 (351)
Q Consensus       125 ~e~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~~~~~~~~~  204 (351)
                      |||++||+|.+++..    +..+++..++.++.|++.||.|||++||+||||||+||+++                 .++
T Consensus        80 ~E~~~gg~L~~~l~~----~~~l~~~~~~~~~~qi~~aL~~lH~~givHrDlKp~NILi~-----------------~~~  138 (363)
T cd05628          80 MEFLPGGDMMTLLMK----KDTLTEEETQFYIAETVLAIDSIHQLGFIHRDIKPDNLLLD-----------------SKG  138 (363)
T ss_pred             EcCCCCCcHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHhCCeEecCCCHHHeEEC-----------------CCC
Confidence            999999999999987    46899999999999999999999999999999999999998                 677


Q ss_pred             CeEEeecCCccccccCCC---------------------------------CccccccccCCCcccceeccCCCCCccch
Q 018699          205 GLCLVDWGRGIDLHLFPD---------------------------------NMEFEGDCRTSGFRCIEMQEKKPWKFQVD  251 (351)
Q Consensus       205 ~~~l~Dfg~a~~~~~~~~---------------------------------~~~~~~~~g~~~y~aPE~~~~~~~~~~~D  251 (351)
                      .++|+|||++........                                 .......+||+.|+|||++.+..++.++|
T Consensus       139 ~vkL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~~D  218 (363)
T cd05628         139 HVKLSDFGLCTGLKKAHRTEFYRNLNHSLPSDFTFQNMNSKRKAETWKRNRRQLAFSTVGTPDYIAPEVFMQTGYNKLCD  218 (363)
T ss_pred             CEEEeeccCcccccccccccccccccccccccccccccccccccchhhhccccccccccCCccccCHHHHcCCCCCCchh
Confidence            899999999864321100                                 00012357999999999999989999999


Q ss_pred             HhHHHHHHHHHHhCccccccccCCCCCceee--ecCcchhh--hhHHHHHHHHHHHHhcCCCC---CChHHHHHHHHHHH
Q 018699          252 TYGLCAIVHMMLHNSYMEIEKKASPDGGLVY--LPKLSFKR--YWKVELWKSLFTNLLNMSSG---NDKEVLQNLQKSFQ  324 (351)
Q Consensus       252 iwslG~il~~l~~g~~p~~~~~~~~~~~~~~--~~~~~~~~--~~~~~~~~~li~~~L~~dP~---~R~s~~e~l~~~~~  324 (351)
                      ||||||++|+|++|..||...........+.  .....+|.  ..+ +.+++||.+|+. +|.   .||++.|+++|||.
T Consensus       219 vwSlGvil~ell~G~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s-~~~~~li~~l~~-~~~~r~~r~~~~ei~~hp~f  296 (363)
T cd05628         219 WWSLGVIMYEMLIGYPPFCSETPQETYKKVMNWKETLIFPPEVPIS-EKAKDLILRFCC-EWEHRIGAPGVEEIKTNPFF  296 (363)
T ss_pred             hhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHcCcCcccCCCcCCCC-HHHHHHHHHHcC-ChhhcCCCCCHHHHhCCCCC
Confidence            9999999999999999997544321111110  11111221  123 788999999775 454   45899999999863

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus

>cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=1.7e-41  Score=313.16  Aligned_cols=254  Identities=18%  Similarity=0.196  Sum_probs=196.0

Q ss_pred             eeEEEEEEeeccCceEEEEEEecCCCCceEEEEecCCCCCh---HHHHHHHHHhhhccccccccccceeeecccCeeEEE
Q 018699           48 KKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFPW---EFYMYRQLDQRISGRERSSFGFAHRIHLYSDYSILV  124 (351)
Q Consensus        48 ~~Y~i~~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~~~---e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv  124 (351)
                      ++|++.+.||+|+||+||+|+ +..+++.||||++......   ....+......+....|++++.....+..++..|+|
T Consensus         1 ~~y~~~~~lG~G~~g~V~~~~-~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv   79 (364)
T cd05599           1 DDFESIKVIGRGAFGEVRLVQ-KKDTGHIYAMKKLRKSEMLEKEQVAHVRAERDILAEADNPWVVKLYYSFQDENYLYLI   79 (364)
T ss_pred             CCceEEEEEEecCCEEEEEEE-ECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEcCCeEEEE
Confidence            479999999999999999999 5677899999998753211   112222222334455688888888888889999999


Q ss_pred             EEecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeeccCCCCCcccC
Q 018699          125 CDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSGPWQDQ  204 (351)
Q Consensus       125 ~e~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~~~~~~~~~  204 (351)
                      |||+++++|.+++..    +..+++..++.++.|++.||+|||++||+||||||+||+++                 .++
T Consensus        80 ~E~~~~g~L~~~l~~----~~~l~~~~~~~~~~qi~~aL~~lH~~~ivH~Dlkp~NIl~~-----------------~~~  138 (364)
T cd05599          80 MEYLPGGDMMTLLMK----KDTFTEEETRFYIAETILAIDSIHKLGYIHRDIKPDNLLLD-----------------AKG  138 (364)
T ss_pred             ECCCCCcHHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeEEC-----------------CCC
Confidence            999999999999877    46799999999999999999999999999999999999999                 778


Q ss_pred             CeEEeecCCccccccCCCCc------------------------------------cccccccCCCcccceeccCCCCCc
Q 018699          205 GLCLVDWGRGIDLHLFPDNM------------------------------------EFEGDCRTSGFRCIEMQEKKPWKF  248 (351)
Q Consensus       205 ~~~l~Dfg~a~~~~~~~~~~------------------------------------~~~~~~g~~~y~aPE~~~~~~~~~  248 (351)
                      .++|+|||++..........                                    .....+||+.|+|||++.+..++.
T Consensus       139 ~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~  218 (364)
T cd05599         139 HIKLSDFGLCTGLKKSHRTEFYRILSHALPSNFLDFISKPMSSKRKAETWKRNRRALAYSTVGTPDYIAPEVFLQTGYNK  218 (364)
T ss_pred             CEEEeecccceeccccccccccccccccccccccccccccccccccccchhhcccccccccccCccccCHHHHcCCCCCC
Confidence            89999999886432111000                                    011246899999999999888999


Q ss_pred             cchHhHHHHHHHHHHhCccccccccCCCCCcee--eecCcchhh--hhHHHHHHHHHHHHhcCCCCCChH---HHHHHHH
Q 018699          249 QVDTYGLCAIVHMMLHNSYMEIEKKASPDGGLV--YLPKLSFKR--YWKVELWKSLFTNLLNMSSGNDKE---VLQNLQK  321 (351)
Q Consensus       249 ~~DiwslG~il~~l~~g~~p~~~~~~~~~~~~~--~~~~~~~~~--~~~~~~~~~li~~~L~~dP~~R~s---~~e~l~~  321 (351)
                      ++|||||||++|+|++|..||............  .......+.  .++ +.+++||.+||. +|.+|++   +.+++.|
T Consensus       219 ~~DiwSlG~il~el~~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s-~~~~~li~~ll~-~p~~R~~~~~~~~ll~h  296 (364)
T cd05599         219 ECDWWSLGVIMYEMLVGYPPFCSDNPQETYRKIINWKETLQFPDEVPLS-PEAKDLIKRLCC-EAERRLGNNGVNEIKSH  296 (364)
T ss_pred             eeeeecchhHHHHhhcCCCCCCCCCHHHHHHHHHcCCCccCCCCCCCCC-HHHHHHHHHHcc-CHhhcCCCCCHHHHhcC
Confidence            999999999999999999999754432110000  011111111  223 788999999997 9999998   9999999


Q ss_pred             HHHH
Q 018699          322 SFQD  325 (351)
Q Consensus       322 ~~~~  325 (351)
                      +|..
T Consensus       297 ~~~~  300 (364)
T cd05599         297 PFFK  300 (364)
T ss_pred             CCcC
Confidence            8743

Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica

>cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6

Probab=100.00  E-value=5.4e-41  Score=300.07  Aligned_cols=252  Identities=18%  Similarity=0.204  Sum_probs=188.9

Q ss_pred             eeEEEEEEeeccCceEEEEEEecCCCCceEEEEecCCCCChH---HHHHHH--HHhhhccccccccccceeeec-----c
Q 018699           48 KKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFPWE---FYMYRQ--LDQRISGRERSSFGFAHRIHL-----Y  117 (351)
Q Consensus        48 ~~Y~i~~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~~~e---~~~~~~--~~~~~~~~~~~~~~~~~~~~~-----~  117 (351)
                      ++|++.+.||+|+||+||+|++...+++.||+|.+......+   ....++  +...+....|++++...+++.     .
T Consensus         1 ~~Y~~~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~hpniv~~~~~~~~~~~~~   80 (290)
T cd07862           1 QQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDR   80 (290)
T ss_pred             CCcceeeEeccCCCeEEEEEEEcCCCCeEEEEEEEecccCCCCchHHHHHHHHHHHhhcccCCCCcceEEEEEecccCCC
Confidence            479999999999999999999545567899999876432211   112222  222233345778877776653     2


Q ss_pred             cCeeEEEEEecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeeccCC
Q 018699          118 SDYSILVCDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDR  197 (351)
Q Consensus       118 ~~~~~lv~e~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~~  197 (351)
                      ...+++||||+ +++|.+++....  ...+++..++.++.|++.||.|||++||+|+||||+||+++             
T Consensus        81 ~~~~~lv~e~~-~~~l~~~~~~~~--~~~~~~~~~~~i~~qi~~aL~~lH~~~iiH~dlkp~Nil~~-------------  144 (290)
T cd07862          81 ETKLTLVFEHV-DQDLTTYLDKVP--EPGVPTETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNILVT-------------  144 (290)
T ss_pred             CCcEEEEEccC-CCCHHHHHHhCC--CCCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHHEEEc-------------
Confidence            45689999999 569999887642  34589999999999999999999999999999999999998             


Q ss_pred             CCCcccCCeEEeecCCccccccCCCCccccccccCCCcccceeccCCCCCccchHhHHHHHHHHHHhCccccccccCCCC
Q 018699          198 SGPWQDQGLCLVDWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQEKKPWKFQVDTYGLCAIVHMMLHNSYMEIEKKASPD  277 (351)
Q Consensus       198 ~~~~~~~~~~l~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~p~~~~~~~~~  277 (351)
                          .++.++|+|||++.....   ........|++.|+|||.+.+..++.++|||||||++|+|++|.+||........
T Consensus       145 ----~~~~~kl~Dfg~~~~~~~---~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~~f~~~~~~~~  217 (290)
T cd07862         145 ----SSGQIKLADFGLARIYSF---QMALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQ  217 (290)
T ss_pred             ----CCCCEEEccccceEeccC---CcccccccccccccChHHHhCCCCCCccchHHHHHHHHHHHcCCCCcCCCCHHHH
Confidence                677899999999864321   1223445689999999999888899999999999999999999999875432100


Q ss_pred             ------------------------CceeeecCcchh---hhhHHHHHHHHHHHHhcCCCCCChHHHHHHHHHH
Q 018699          278 ------------------------GGLVYLPKLSFK---RYWKVELWKSLFTNLLNMSSGNDKEVLQNLQKSF  323 (351)
Q Consensus       278 ------------------------~~~~~~~~~~~~---~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~~~~  323 (351)
                                              ..+...+.....   ...+ +.+++||.+||+.||++||++.++|.|||
T Consensus       218 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~li~~~l~~~P~~R~s~~~~l~hp~  289 (290)
T cd07862         218 LGKILDVIGLPGEEDWPRDVALPRQAFHSKSAQPIEKFVTDID-ELGKDLLLKCLTFNPAKRISAYSALSHPY  289 (290)
T ss_pred             HHHHHHHhCCCChhhchhhhcccchhccCCCCCCHHHHccCCC-HHHHHHHHHHhccCchhcCCHHHHhcCCC
Confidence                                    000000011111   1122 67889999999999999999999999986

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla

>cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C

Probab=100.00  E-value=5.5e-42  Score=310.47  Aligned_cols=246  Identities=19%  Similarity=0.220  Sum_probs=190.9

Q ss_pred             EEeeccCceEEEEEEecCCCCceEEEEecCCCCC---hHHHHHHHHHhhh-ccccccccccceeeecccCeeEEEEEecC
Q 018699           54 GCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFP---WEFYMYRQLDQRI-SGRERSSFGFAHRIHLYSDYSILVCDYLS  129 (351)
Q Consensus        54 ~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~~---~e~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~lv~e~~~  129 (351)
                      +.||+|+||+||+|+ +..+++.||+|++.+...   .+........... ....|++++....+....+.+|+||||++
T Consensus         1 ~~lG~G~~g~V~~~~-~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~   79 (318)
T cd05570           1 KVLGKGSFGKVLLAE-LKGTDELYAVKVLKKDVILQDDDVECTMTEKRVLALAGKHPFLTQLHSCFQTKDRLFFVMEYVN   79 (318)
T ss_pred             CeeeeCCCeEEEEEE-ECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCCEEEEEEcCCC
Confidence            469999999999999 567789999999875421   1111111111111 12267888888888888889999999999


Q ss_pred             CCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeeccCCCCCcccCCeEEe
Q 018699          130 QGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSGPWQDQGLCLV  209 (351)
Q Consensus       130 ~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~~~~~~~~~~~~l~  209 (351)
                      +++|...+..    ...+++..+..++.|++.||+|||++||+|+||+|+||+++                 .++.++|+
T Consensus        80 ~~~L~~~~~~----~~~l~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~Nill~-----------------~~~~~kl~  138 (318)
T cd05570          80 GGDLMFHIQR----SGRFDEPRARFYAAEIVLGLQFLHERGIIYRDLKLDNVLLD-----------------SEGHIKIA  138 (318)
T ss_pred             CCCHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHhCCeEccCCCHHHeEEC-----------------CCCcEEec
Confidence            9999998876    46799999999999999999999999999999999999999                 77889999


Q ss_pred             ecCCccccccCCCCccccccccCCCcccceeccCCCCCccchHhHHHHHHHHHHhCccccccccCCCCCceeeecCcchh
Q 018699          210 DWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQEKKPWKFQVDTYGLCAIVHMMLHNSYMEIEKKASPDGGLVYLPKLSFK  289 (351)
Q Consensus       210 Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~  289 (351)
                      |||++....  .........+|++.|+|||++.+..++.++|||||||++|+|++|..||...................+
T Consensus       139 Dfg~~~~~~--~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslGvil~~l~~G~~pf~~~~~~~~~~~i~~~~~~~~  216 (318)
T cd05570         139 DFGMCKEGI--LGGVTTSTFCGTPDYIAPEILSYQPYGPAVDWWALGVLLYEMLAGQSPFEGDDEDELFQSILEDEVRYP  216 (318)
T ss_pred             ccCCCeecC--cCCCcccceecCccccCHHHhcCCCCCcchhhhhHHHHHHHHhhCCCCCCCCCHHHHHHHHHcCCCCCC
Confidence            999885321  112223345689999999999999999999999999999999999999965432211111111222333


Q ss_pred             hhhHHHHHHHHHHHHhcCCCCCChHH-----HHHHHHHHH
Q 018699          290 RYWKVELWKSLFTNLLNMSSGNDKEV-----LQNLQKSFQ  324 (351)
Q Consensus       290 ~~~~~~~~~~li~~~L~~dP~~R~s~-----~e~l~~~~~  324 (351)
                      ...+ +.+.+||.+||..||++||++     .+++.|+|.
T Consensus       217 ~~~~-~~~~~li~~~l~~dP~~R~s~~~~~~~~ll~~~~~  255 (318)
T cd05570         217 RWLS-KEAKSILKSFLTKNPEKRLGCLPTGEQDIKGHPFF  255 (318)
T ss_pred             CcCC-HHHHHHHHHHccCCHHHcCCCCCCCHHHHhcCCCc
Confidence            3344 789999999999999999999     999999864

Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re

>cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3

Probab=100.00  E-value=6e-41  Score=306.38  Aligned_cols=261  Identities=13%  Similarity=0.104  Sum_probs=189.8

Q ss_pred             EEEcCeeEEEEEEeeccCceEEEEEEe----cCCCCceEEEEecCCCCChH--HHHHHHHHhhhccccccccccceeeec
Q 018699           43 IEIGGKKYQIKGCAGQGGFAKVFKAYV----NGDPEDVVALKIQKPAFPWE--FYMYRQLDQRISGRERSSFGFAHRIHL  116 (351)
Q Consensus        43 ~~i~~~~Y~i~~~lg~G~~g~V~~a~~----~~~~~~~vaiK~~~~~~~~e--~~~~~~~~~~~~~~~~~~~~~~~~~~~  116 (351)
                      +++..++|++.+.||.|+||.||+|.+    +..+++.||+|++......+  ...+.++.-......|++++.....+.
T Consensus         2 ~~~~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~   81 (338)
T cd05102           2 WEFPRDRLRLGKVLGHGAFGKVVEASAFGIDKKSSCNTVAVKMLKEGATASEHKALMSELKILIHIGNHLNVVNLLGACT   81 (338)
T ss_pred             cccchhHceeeeEeccCCcceEEEEEEeccCCcccchhhheeccccccchHHHHHHHHHHHHHHHhccCcceeeEEeEec
Confidence            457788999999999999999999974    23456789999987543221  122222222212225778777776554


Q ss_pred             c-cCeeEEEEEecCCCCHHHHHHHHHhh----------------------------------------------------
Q 018699          117 Y-SDYSILVCDYLSQGTLQDAINSYVVI----------------------------------------------------  143 (351)
Q Consensus       117 ~-~~~~~lv~e~~~~~sL~~~l~~~~~~----------------------------------------------------  143 (351)
                      . .+.+++||||+++|+|.+++......                                                    
T Consensus        82 ~~~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  161 (338)
T cd05102          82 KPNGPLMVIVEFCKYGNLSNFLRAKREFFSPYREKSPKQRGRFRAMVEQSRVDRRIEAGQASVLFSRFQPSTSGSTNPPQ  161 (338)
T ss_pred             CCCCceEEEEecCCCCcHHHHHHhcchhcccccccchhhhhhhhhhhhhhccccccccccCCccccccccccCcccccch
Confidence            3 45689999999999999998753210                                                    


Q ss_pred             ------CCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeeccCCCCCcccCCeEEeecCCcccc
Q 018699          144 ------GKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSGPWQDQGLCLVDWGRGIDL  217 (351)
Q Consensus       144 ------~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~~~~~~~~~~~~l~Dfg~a~~~  217 (351)
                            ..++++..+..++.||+.||.|||++||+||||||+||+++                 .++.++|+|||++...
T Consensus       162 ~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDiKp~Nil~~-----------------~~~~~kl~DfG~a~~~  224 (338)
T cd05102         162 ETDDLWKSPLTMEDLICYSFQVARGMEFLASRKCIHRDLAARNILLS-----------------ENNVVKICDFGLARDI  224 (338)
T ss_pred             hccccccCCCCHHHHHHHHHHHHHHHHHHHHCCEECCCCccceEEEc-----------------CCCcEEEeeccccccc
Confidence                  12477788899999999999999999999999999999998                 6778999999998653


Q ss_pred             ccCCCCccccccccCCCcccceeccCCCCCccchHhHHHHHHHHHHh-CccccccccCCCC--CceeeecCcchhhhhHH
Q 018699          218 HLFPDNMEFEGDCRTSGFRCIEMQEKKPWKFQVDTYGLCAIVHMMLH-NSYMEIEKKASPD--GGLVYLPKLSFKRYWKV  294 (351)
Q Consensus       218 ~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~-g~~p~~~~~~~~~--~~~~~~~~~~~~~~~~~  294 (351)
                      .............++..|+|||++.+..++.++|||||||++|+|++ |..||........  ...........+...+ 
T Consensus       225 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDiwslG~il~el~~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~-  303 (338)
T cd05102         225 YKDPDYVRKGSARLPLKWMAPESIFDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQINEEFCQRLKDGTRMRAPENAT-  303 (338)
T ss_pred             ccCcchhcccCCCCCccccCcHHhhcCCCCcccCHHHHHHHHHHHHhCCCCCCCCCCccHHHHHHHhcCCCCCCCCCCC-
Confidence            22111112223345678999999988889999999999999999997 9999865432210  0000011112233334 


Q ss_pred             HHHHHHHHHHhcCCCCCChHHHHHHHH
Q 018699          295 ELWKSLFTNLLNMSSGNDKEVLQNLQK  321 (351)
Q Consensus       295 ~~~~~li~~~L~~dP~~R~s~~e~l~~  321 (351)
                      +.+.++|.+||..||.+||++.++++.
T Consensus       304 ~~l~~li~~cl~~dp~~RPs~~el~~~  330 (338)
T cd05102         304 PEIYRIMLACWQGDPKERPTFSALVEI  330 (338)
T ss_pred             HHHHHHHHHHccCChhhCcCHHHHHHH
Confidence            789999999999999999999998764

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V

>cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota

Probab=100.00  E-value=2.5e-41  Score=307.54  Aligned_cols=246  Identities=18%  Similarity=0.200  Sum_probs=191.6

Q ss_pred             EEeeccCceEEEEEEecCCCCceEEEEecCCCCChHHHH----HHHHHhhhccccccccccceeeecccCeeEEEEEecC
Q 018699           54 GCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFPWEFYM----YRQLDQRISGRERSSFGFAHRIHLYSDYSILVCDYLS  129 (351)
Q Consensus        54 ~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~~~e~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~  129 (351)
                      +.||+|+||+||+|+ +..+++.||+|++.+........    ..+.........|++++.....+...+..|+||||++
T Consensus         1 ~~lG~G~~g~V~~~~-~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~E~~~   79 (329)
T cd05618           1 RVIGRGSYAKVLLVR-LKKTERIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVN   79 (329)
T ss_pred             CeeeeCCCeEEEEEE-ECCCCCEEEEEEEEhhHhcchhHHHHHHHHHHHHHhcCCCCcCCceeeEEEeCCEEEEEEeCCC
Confidence            479999999999999 56788999999987643222111    1121111223467888888888888899999999999


Q ss_pred             CCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeeccCCCCCcccCCeEEe
Q 018699          130 QGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSGPWQDQGLCLV  209 (351)
Q Consensus       130 ~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~~~~~~~~~~~~l~  209 (351)
                      +++|..++..    ...+++..++.++.|++.|+.|||++||+||||||+||+++                 .++.++|+
T Consensus        80 ~~~L~~~~~~----~~~l~~~~~~~i~~qi~~~l~~lH~~~ivH~Dikp~Nili~-----------------~~~~~kL~  138 (329)
T cd05618          80 GGDLMFHMQR----QRKLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLLD-----------------SEGHIKLT  138 (329)
T ss_pred             CCCHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHHEEEC-----------------CCCCEEEe
Confidence            9999988876    46799999999999999999999999999999999999999                 77889999


Q ss_pred             ecCCccccccCCCCccccccccCCCcccceeccCCCCCccchHhHHHHHHHHHHhCccccccccCCCCC---------ce
Q 018699          210 DWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQEKKPWKFQVDTYGLCAIVHMMLHNSYMEIEKKASPDG---------GL  280 (351)
Q Consensus       210 Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~p~~~~~~~~~~---------~~  280 (351)
                      |||++....  ..........||+.|+|||++.+..++.++|||||||++|+|++|..||.........         ..
T Consensus       139 DfG~~~~~~--~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~  216 (329)
T cd05618         139 DYGMCKEGL--RPGDTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQV  216 (329)
T ss_pred             eCCcccccc--CCCCccccccCCccccCHHHHcCCCCCCccceecccHHHHHHhhCCCCCccCCCcCCcccccHHHHHHH
Confidence            999886321  1222334457899999999999999999999999999999999999999532111000         00


Q ss_pred             eeecCcchhhhhHHHHHHHHHHHHhcCCCCCChH------HHHHHHHHHH
Q 018699          281 VYLPKLSFKRYWKVELWKSLFTNLLNMSSGNDKE------VLQNLQKSFQ  324 (351)
Q Consensus       281 ~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~s------~~e~l~~~~~  324 (351)
                      .......+|...+ ..+.+||.+||+.||.+|++      ..+++.|||.
T Consensus       217 i~~~~~~~p~~~~-~~~~~ll~~~L~~dP~~R~~~~~~~~~~~i~~hp~f  265 (329)
T cd05618         217 ILEKQIRIPRSLS-VKAASVLKSFLNKDPKERLGCHPQTGFADIQGHPFF  265 (329)
T ss_pred             HhcCCCCCCCCCC-HHHHHHHHHHhcCCHHHcCCCCCCCCHHHHhcCCCC
Confidence            1122333444455 78899999999999999998      4799999864

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o

>PTZ00036 glycogen synthase kinase; Provisional

Probab=100.00  E-value=1.2e-40  Score=313.72  Aligned_cols=256  Identities=18%  Similarity=0.237  Sum_probs=188.6

Q ss_pred             cCeeEEEEEEeeccCceEEEEEEecCCCCceEEEEecCCCCChHHHHHHHHHhhhccccccccccceeeecc--------
Q 018699           46 GGKKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFPWEFYMYRQLDQRISGRERSSFGFAHRIHLY--------  117 (351)
Q Consensus        46 ~~~~Y~i~~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------  117 (351)
                      ..++|++.+.||+|+||+||+|. +..+++.||||++.........   + ...+....|++++....++..        
T Consensus        64 ~~~~y~~~~~LG~G~fg~Vy~~~-~~~~~~~vAiK~i~~~~~~~~~---E-i~il~~l~h~niv~l~~~~~~~~~~~~~~  138 (440)
T PTZ00036         64 PNKSYKLGNIIGNGSFGVVYEAI-CIDTSEKVAIKKVLQDPQYKNR---E-LLIMKNLNHINIIFLKDYYYTECFKKNEK  138 (440)
T ss_pred             cCCeEEEeEEEEeCCCEEEEEEE-ECCCCCEEEEEEEecCcchHHH---H-HHHHHhcCCCCCcceeeeEeecccccCCC
Confidence            45789999999999999999999 5677899999988654322111   1 112233456677665544321        


Q ss_pred             cCeeEEEEEecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeeccCC
Q 018699          118 SDYSILVCDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDR  197 (351)
Q Consensus       118 ~~~~~lv~e~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~~  197 (351)
                      ...+++||||++ ++|.+++......+..+++..++.++.||+.||+|||++||+||||||+||+++.            
T Consensus       139 ~~~l~lvmE~~~-~~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~gL~yLH~~~IiHrDLKp~NILl~~------------  205 (440)
T PTZ00036        139 NIFLNVVMEFIP-QTVHKYMKHYARNNHALPLFLVKLYSYQLCRALAYIHSKFICHRDLKPQNLLIDP------------  205 (440)
T ss_pred             ceEEEEEEecCC-ccHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCcCHHHEEEcC------------
Confidence            235679999995 5888887765444678999999999999999999999999999999999999983            


Q ss_pred             CCCcccCCeEEeecCCccccccCCCCccccccccCCCcccceeccC-CCCCccchHhHHHHHHHHHHhCccccccccCCC
Q 018699          198 SGPWQDQGLCLVDWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQEK-KPWKFQVDTYGLCAIVHMMLHNSYMEIEKKASP  276 (351)
Q Consensus       198 ~~~~~~~~~~l~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~~DiwslG~il~~l~~g~~p~~~~~~~~  276 (351)
                          ..+.+||+|||++....   .........|++.|+|||++.+ ..++.++|||||||++|+|++|.+||.......
T Consensus       206 ----~~~~vkL~DFGla~~~~---~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~pf~~~~~~~  278 (440)
T PTZ00036        206 ----NTHTLKLCDFGSAKNLL---AGQRSVSYICSRFYRAPELMLGATNYTTHIDLWSLGCIIAEMILGYPIFSGQSSVD  278 (440)
T ss_pred             ----CCCceeeeccccchhcc---CCCCcccCCCCcCccCHHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHH
Confidence                22359999999986532   1222334578999999999866 468999999999999999999999997543210


Q ss_pred             C--------C---------------ceeeec------CcchhhhhHHHHHHHHHHHHhcCCCCCChHHHHHHHHHHHHHH
Q 018699          277 D--------G---------------GLVYLP------KLSFKRYWKVELWKSLFTNLLNMSSGNDKEVLQNLQKSFQDYL  327 (351)
Q Consensus       277 ~--------~---------------~~~~~~------~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~~~~~~~~  327 (351)
                      .        +               ...+..      ...+|...+ +++.+||.+||.+||.+||++.|++.|||..-+
T Consensus       279 ~~~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~~~p~~~~-~~~~~li~~~L~~dP~~R~ta~e~l~hp~f~~~  357 (440)
T PTZ00036        279 QLVRIIQVLGTPTEDQLKEMNPNYADIKFPDVKPKDLKKVFPKGTP-DDAINFISQFLKYEPLKRLNPIEALADPFFDDL  357 (440)
T ss_pred             HHHHHHHHhCCCCHHHHHHhchhhhcccCCccCchhHHHHhccCCC-HHHHHHHHHHCCCChhHCcCHHHHhCChhHHhh
Confidence            0        0               000000      001122223 688999999999999999999999999985443

>cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase

Probab=100.00  E-value=1.6e-41  Score=308.19  Aligned_cols=247  Identities=21%  Similarity=0.226  Sum_probs=192.4

Q ss_pred             EEeeccCceEEEEEEec--CCCCceEEEEecCCCCC----hHHHHHHHHHhhhccccccccccceeeecccCeeEEEEEe
Q 018699           54 GCAGQGGFAKVFKAYVN--GDPEDVVALKIQKPAFP----WEFYMYRQLDQRISGRERSSFGFAHRIHLYSDYSILVCDY  127 (351)
Q Consensus        54 ~~lg~G~~g~V~~a~~~--~~~~~~vaiK~~~~~~~----~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~  127 (351)
                      +.||+|+||.||+|++.  ..+++.||+|++.....    ............+....|++++.....+..++..|+||||
T Consensus         2 ~~lg~G~~g~V~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~~~~~~lv~e~   81 (323)
T cd05584           2 KVLGKGGYGKVFQVRKVTGADTGKIFAMKVLKKATIVRNQKDTAHTKAERNILEAVKHPFIVDLIYAFQTGGKLYLILEY   81 (323)
T ss_pred             ceeeecCCeEEEEEEEcccCCCCCEEEEEEEEHHHHHhhhhhHHHHHHHHHHHHhCCCCchhceeeEEecCCeEEEEEeC
Confidence            68999999999999852  35688999999864311    1111111222334455678888888888888899999999


Q ss_pred             cCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeeccCCCCCcccCCeE
Q 018699          128 LSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSGPWQDQGLC  207 (351)
Q Consensus       128 ~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~~~~~~~~~~~~  207 (351)
                      +++++|.+++..    ...+++..+..++.|++.||.|||++||+|+||||+||+++                 .++.++
T Consensus        82 ~~~~~L~~~~~~----~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~~-----------------~~~~~k  140 (323)
T cd05584          82 LSGGELFMHLER----EGIFMEDTACFYLSEISLALEHLHQQGIIYRDLKPENILLD-----------------AQGHVK  140 (323)
T ss_pred             CCCchHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEEC-----------------CCCCEE
Confidence            999999999877    46788899999999999999999999999999999999998                 778899


Q ss_pred             EeecCCccccccCCCCccccccccCCCcccceeccCCCCCccchHhHHHHHHHHHHhCccccccccCCCCCceeeecCcc
Q 018699          208 LVDWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQEKKPWKFQVDTYGLCAIVHMMLHNSYMEIEKKASPDGGLVYLPKLS  287 (351)
Q Consensus       208 l~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~  287 (351)
                      |+|||++....  ..........|++.|+|||++.+..++.++|||||||++|+|++|..||..................
T Consensus       141 l~Dfg~~~~~~--~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~pf~~~~~~~~~~~~~~~~~~  218 (323)
T cd05584         141 LTDFGLCKESI--HEGTVTHTFCGTIEYMAPEILMRSGHGKAVDWWSLGALMYDMLTGAPPFTAENRKKTIDKILKGKLN  218 (323)
T ss_pred             EeeCcCCeecc--cCCCcccccCCCccccChhhccCCCCCCcceecccHHHHHHHhcCCCCCCCCCHHHHHHHHHcCCCC
Confidence            99999886422  1222233457899999999999888899999999999999999999999754432111111122233


Q ss_pred             hhhhhHHHHHHHHHHHHhcCCCCCCh-----HHHHHHHHHHH
Q 018699          288 FKRYWKVELWKSLFTNLLNMSSGNDK-----EVLQNLQKSFQ  324 (351)
Q Consensus       288 ~~~~~~~~~~~~li~~~L~~dP~~R~-----s~~e~l~~~~~  324 (351)
                      ++...+ +.+.+||.+||++||++||     ++.+++.|+|.
T Consensus       219 ~~~~~~-~~~~~li~~~l~~~p~~R~~~~~~~~~~l~~h~~~  259 (323)
T cd05584         219 LPPYLT-PEARDLLKKLLKRNPSSRLGAGPGDAAEVQSHPFF  259 (323)
T ss_pred             CCCCCC-HHHHHHHHHHcccCHhHcCCCCCCCHHHHhcCCCc
Confidence            344444 7899999999999999999     89999999874

Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in

>KOG0599 consensus Phosphorylase kinase gamma subunit [Carbohydrate transport and metabolism]

Probab=100.00  E-value=1.2e-42  Score=288.36  Aligned_cols=248  Identities=19%  Similarity=0.239  Sum_probs=202.0

Q ss_pred             eeEEEEEEeeccCceEEEEEEecCCCCceEEEEecCCC-----CChHHHHHHHHHhh----hccccccccccceeeeccc
Q 018699           48 KKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPA-----FPWEFYMYRQLDQR----ISGRERSSFGFAHRIHLYS  118 (351)
Q Consensus        48 ~~Y~i~~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~-----~~~e~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~  118 (351)
                      +.|+-.+.||+|..++|-+|. ...+|+.+|+|++.-.     ...-.++......+    -....||++..+++++..+
T Consensus        17 ~~y~pkeilgrgvss~vrRci-~k~t~~e~a~kii~~~at~~~~e~~~~~~EaT~~Ev~ILRqv~GHP~II~l~D~yes~   95 (411)
T KOG0599|consen   17 AKYEPKEILGRGVSSVVRRCI-HKETGKEFAVKIIDVTATTESGETPYEMREATRQEISILRQVMGHPYIIDLQDVYESD   95 (411)
T ss_pred             hhcChHHHhcccchhhhhhhh-hcccccceeEEEEEecccccCCccHHHHHHHHHHHHHHHHHhcCCCcEEEeeeeccCc
Confidence            568889999999999999999 5677788888876521     11111222211111    2345788899999999999


Q ss_pred             CeeEEEEEecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeeccCCC
Q 018699          119 DYSILVCDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRS  198 (351)
Q Consensus       119 ~~~~lv~e~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~~~  198 (351)
                      .+.|+|+|.|+.|.|.+++..    .-.++++..+.|+.|+++|+.|||.++|+||||||+||+++              
T Consensus        96 sF~FlVFdl~prGELFDyLts----~VtlSEK~tR~iMrqlfegVeylHa~~IVHRDLKpENILld--------------  157 (411)
T KOG0599|consen   96 AFVFLVFDLMPRGELFDYLTS----KVTLSEKETRRIMRQLFEGVEYLHARNIVHRDLKPENILLD--------------  157 (411)
T ss_pred             chhhhhhhhcccchHHHHhhh----heeecHHHHHHHHHHHHHHHHHHHHhhhhhcccChhheeec--------------
Confidence            999999999999999999998    46899999999999999999999999999999999999999              


Q ss_pred             CCcccCCeEEeecCCccccccCCCCccccccccCCCcccceecc------CCCCCccchHhHHHHHHHHHHhCccccccc
Q 018699          199 GPWQDQGLCLVDWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQE------KKPWKFQVDTYGLCAIVHMMLHNSYMEIEK  272 (351)
Q Consensus       199 ~~~~~~~~~l~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~------~~~~~~~~DiwslG~il~~l~~g~~p~~~~  272 (351)
                         .+.+++|+|||++..   .+++......||||+|+|||.+.      ...|+..+|+|++|||+|.|+.|.+||.-.
T Consensus       158 ---dn~~i~isDFGFa~~---l~~GekLrelCGTPgYLAPEtikC~m~e~~pGYs~EVD~Wa~GVImyTLLaGcpPFwHR  231 (411)
T KOG0599|consen  158 ---DNMNIKISDFGFACQ---LEPGEKLRELCGTPGYLAPETIKCSMYENHPGYSKEVDEWACGVIMYTLLAGCPPFWHR  231 (411)
T ss_pred             ---cccceEEeccceeec---cCCchhHHHhcCCCcccChhheeeecccCCCCccchhhHHHHHHHHHHHHcCCCchhHH
Confidence               778899999999975   35677788899999999999873      346789999999999999999999999865


Q ss_pred             cCC------CCCceeeecCcchhhhhHH--HHHHHHHHHHhcCCCCCChHHHHHHHHHHHH
Q 018699          273 KAS------PDGGLVYLPKLSFKRYWKV--ELWKSLFTNLLNMSSGNDKEVLQNLQKSFQD  325 (351)
Q Consensus       273 ~~~------~~~~~~~~~~~~~~~~~~~--~~~~~li~~~L~~dP~~R~s~~e~l~~~~~~  325 (351)
                      .+.      ..+++.+..     ..|.+  +..++||++||+.||.+|+|+.|+|+|||..
T Consensus       232 kQmlMLR~ImeGkyqF~s-----peWadis~~~KdLIsrlLqVdp~~Ritake~LaHpff~  287 (411)
T KOG0599|consen  232 KQMLMLRMIMEGKYQFRS-----PEWADISATVKDLISRLLQVDPTKRITAKEALAHPFFI  287 (411)
T ss_pred             HHHHHHHHHHhcccccCC-----cchhhccccHHHHHHHHHeeCchhcccHHHHhcChHHH
Confidence            543      234443322     22432  7889999999999999999999999999853

>cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2

Probab=100.00  E-value=5.1e-41  Score=311.55  Aligned_cols=253  Identities=19%  Similarity=0.174  Sum_probs=192.8

Q ss_pred             eEEEEEEeeccCceEEEEEEecCCCCceEEEEecCCCCChH---HHHHHHHHhhhccccccccccceeeecccCeeEEEE
Q 018699           49 KYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFPWE---FYMYRQLDQRISGRERSSFGFAHRIHLYSDYSILVC  125 (351)
Q Consensus        49 ~Y~i~~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~~~e---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~  125 (351)
                      .|++.+.||+|+||+||+|+ +..+++.||+|++.+.....   ...+......+....+++++.....+...+.+|+||
T Consensus         2 ~f~~~~~LG~G~~g~Vy~~~-~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~l~~~~~~~~~~~lv~   80 (381)
T cd05626           2 MFVKIKTLGIGAFGEVCLAC-KVDTHALYAMKTLRKKDVLNRNQVAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVM   80 (381)
T ss_pred             CceEEEEEeecCCEEEEEEE-ECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhcCCCCeeeeEEEEecCCEEEEEE
Confidence            68999999999999999999 57789999999987542211   112222223344556788888888888889999999


Q ss_pred             EecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeeccCCCCCcccCC
Q 018699          126 DYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSGPWQDQG  205 (351)
Q Consensus       126 e~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~~~~~~~~~~  205 (351)
                      ||+++|+|.+++..    ...+++..++.++.||+.||.|||+.||+||||||+||+++                 .++.
T Consensus        81 E~~~gg~L~~~l~~----~~~~~e~~~~~~~~qi~~aL~~LH~~givHrDlKp~Nili~-----------------~~~~  139 (381)
T cd05626          81 DYIPGGDMMSLLIR----MEVFPEVLARFYIAELTLAIESVHKMGFIHRDIKPDNILID-----------------LDGH  139 (381)
T ss_pred             ecCCCCcHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHhCCeeecCCcHHHEEEC-----------------CCCC
Confidence            99999999999877    46789999999999999999999999999999999999998                 6788


Q ss_pred             eEEeecCCccccccCCCC---------------------------------------------ccccccccCCCccccee
Q 018699          206 LCLVDWGRGIDLHLFPDN---------------------------------------------MEFEGDCRTSGFRCIEM  240 (351)
Q Consensus       206 ~~l~Dfg~a~~~~~~~~~---------------------------------------------~~~~~~~g~~~y~aPE~  240 (351)
                      ++|+|||++.........                                             ......+||+.|+|||+
T Consensus       140 ~kL~DFGl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~  219 (381)
T cd05626         140 IKLTDFGLCTGFRWTHNSKYYQKGSHIRQDSMEPSDLWDDVSNCRCGDRLKTLEQRATKQHQRCLAHSLVGTPNYIAPEV  219 (381)
T ss_pred             EEEeeCcCCcccccccccccccccccccccccCcccccccccccccccccchhhccccccccccccccccCCccccCHHH
Confidence            999999987432110000                                             00123468999999999


Q ss_pred             ccCCCCCccchHhHHHHHHHHHHhCccccccccCCCCCce--eeecCcchhh--hhHHHHHHHHHHHHh--cCCCCCChH
Q 018699          241 QEKKPWKFQVDTYGLCAIVHMMLHNSYMEIEKKASPDGGL--VYLPKLSFKR--YWKVELWKSLFTNLL--NMSSGNDKE  314 (351)
Q Consensus       241 ~~~~~~~~~~DiwslG~il~~l~~g~~p~~~~~~~~~~~~--~~~~~~~~~~--~~~~~~~~~li~~~L--~~dP~~R~s  314 (351)
                      +.+..++.++|||||||++|+|++|..||...........  ........+.  ..+ +.+.+||.+|+  ..+|..|++
T Consensus       220 ~~~~~~~~~~DiwSlG~il~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s-~~~~dli~~ll~~~~~~~~R~~  298 (381)
T cd05626         220 LLRKGYTQLCDWWSVGVILFEMLVGQPPFLAPTPTETQLKVINWENTLHIPPQVKLS-PEAVDLITKLCCSAEERLGRNG  298 (381)
T ss_pred             HcCCCCCCccceeehhhHHHHHHhCCCCCcCCCHHHHHHHHHccccccCCCCCCCCC-HHHHHHHHHHccCcccccCCCC
Confidence            9988899999999999999999999999976543211000  0011111111  223 78899999955  555666999


Q ss_pred             HHHHHHHHHH
Q 018699          315 VLQNLQKSFQ  324 (351)
Q Consensus       315 ~~e~l~~~~~  324 (351)
                      +.+++.|+|.
T Consensus       299 ~~~~l~hp~f  308 (381)
T cd05626         299 ADDIKAHPFF  308 (381)
T ss_pred             HHHHhcCccc
Confidence            9999999874

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po

>cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=1.5e-41  Score=314.87  Aligned_cols=253  Identities=18%  Similarity=0.216  Sum_probs=192.9

Q ss_pred             eeEEEEEEeeccCceEEEEEEecCCCCceEEEEecCCCCCh---HHHHHHHHHhhhccccccccccceeeecccCeeEEE
Q 018699           48 KKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFPW---EFYMYRQLDQRISGRERSSFGFAHRIHLYSDYSILV  124 (351)
Q Consensus        48 ~~Y~i~~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~~~---e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv  124 (351)
                      ++|++.+.||+|+||+||+|. +..+++.||||++.+....   ....+......+....+++++.....+...+..|+|
T Consensus         1 ~~y~~~~~lG~G~~g~Vy~~~-~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~~~~~~lv   79 (377)
T cd05629           1 EDFHTVKVIGKGAFGEVRLVQ-KKDTGKIYAMKTLLKSEMFKKDQLAHVKAERDVLAESDSPWVVSLYYSFQDAQYLYLI   79 (377)
T ss_pred             CCceEeEEEeecCCEEEEEEE-ECCCCCEEEEEEEEHHHHHHhHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCeeEEE
Confidence            479999999999999999999 5778899999998653211   111222222334456778888888888888999999


Q ss_pred             EEecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeeccCCCCCcccC
Q 018699          125 CDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSGPWQDQ  204 (351)
Q Consensus       125 ~e~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~~~~~~~~~  204 (351)
                      |||+++++|.+++..    ...+++..++.++.|++.||+|||+.||+||||||+||+++                 .++
T Consensus        80 ~E~~~gg~L~~~l~~----~~~~~~~~~~~~~~ql~~aL~~LH~~givHrDlkp~NIll~-----------------~~~  138 (377)
T cd05629          80 MEFLPGGDLMTMLIK----YDTFSEDVTRFYMAECVLAIEAVHKLGFIHRDIKPDNILID-----------------RGG  138 (377)
T ss_pred             EeCCCCCcHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEEC-----------------CCC
Confidence            999999999999976    46789999999999999999999999999999999999998                 678


Q ss_pred             CeEEeecCCccccccCCCC----------c-----------------------------------cccccccCCCcccce
Q 018699          205 GLCLVDWGRGIDLHLFPDN----------M-----------------------------------EFEGDCRTSGFRCIE  239 (351)
Q Consensus       205 ~~~l~Dfg~a~~~~~~~~~----------~-----------------------------------~~~~~~g~~~y~aPE  239 (351)
                      .++|+|||++.........          .                                   .....+||+.|+|||
T Consensus       139 ~~kl~DfGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE  218 (377)
T cd05629         139 HIKLSDFGLSTGFHKQHDSAYYQKLLQGKSNKNRIDNRNSVAVDSINLTMSSKDQIATWKKNRRLMAYSTVGTPDYIAPE  218 (377)
T ss_pred             CEEEeecccccccccccccccccccccccccccccccccccccccccccccchhhhhhhhhcccccccccCCCccccCHH
Confidence            8999999988532110000          0                                   001246899999999


Q ss_pred             eccCCCCCccchHhHHHHHHHHHHhCccccccccCCCCCce--eeecCcchhh--hhHHHHHHHHHHHHhcCCCCCC---
Q 018699          240 MQEKKPWKFQVDTYGLCAIVHMMLHNSYMEIEKKASPDGGL--VYLPKLSFKR--YWKVELWKSLFTNLLNMSSGND---  312 (351)
Q Consensus       240 ~~~~~~~~~~~DiwslG~il~~l~~g~~p~~~~~~~~~~~~--~~~~~~~~~~--~~~~~~~~~li~~~L~~dP~~R---  312 (351)
                      ++.+..++.++|||||||++|+|++|..||...........  .......+|.  ..+ ..+++||.+||. +|.+|   
T Consensus       219 ~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s-~~~~dli~~lL~-~~~~r~~r  296 (377)
T cd05629         219 IFLQQGYGQECDWWSLGAIMFECLIGWPPFCSENSHETYRKIINWRETLYFPDDIHLS-VEAEDLIRRLIT-NAENRLGR  296 (377)
T ss_pred             HHccCCCCCceeeEecchhhhhhhcCCCCCCCCCHHHHHHHHHccCCccCCCCCCCCC-HHHHHHHHHHhc-CHhhcCCC
Confidence            99988899999999999999999999999965443210000  0011112222  233 789999999998 66665   


Q ss_pred             hHHHHHHHHHHH
Q 018699          313 KEVLQNLQKSFQ  324 (351)
Q Consensus       313 ~s~~e~l~~~~~  324 (351)
                      +++.+++.|+|.
T Consensus       297 ~~~~~~l~hp~~  308 (377)
T cd05629         297 GGAHEIKSHPFF  308 (377)
T ss_pred             CCHHHHhcCCCc
Confidence            599999999874

Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of

>cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1

Probab=100.00  E-value=1.2e-41  Score=309.27  Aligned_cols=245  Identities=20%  Similarity=0.224  Sum_probs=190.2

Q ss_pred             EEeeccCceEEEEEEecCCCCceEEEEecCCCCC----hHHHHHHHHHhhhccccccccccceeeecccCeeEEEEEecC
Q 018699           54 GCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFP----WEFYMYRQLDQRISGRERSSFGFAHRIHLYSDYSILVCDYLS  129 (351)
Q Consensus        54 ~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~~----~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~  129 (351)
                      +.||+|+||+||+|+ +..+++.||+|++.+...    .+...+.+.........|++++.....+...+..|+||||++
T Consensus         1 ~~lg~G~fg~V~~~~-~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~Iv~~~~~~~~~~~~~lv~e~~~   79 (325)
T cd05602           1 KVIGKGSFGKVLLAR-HKAEEKFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLYFVLDYIN   79 (325)
T ss_pred             CeeeeCCCeEEEEEE-ECCCCCEEEEEEEEHHHHHhhhHHHHHHHHHHHHHHhCCCCCCCceeEEEEcCCeEEEEEeCCC
Confidence            469999999999999 567789999999865321    122223232223345678888888888888899999999999


Q ss_pred             CCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeeccCCCCCcccCCeEEe
Q 018699          130 QGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSGPWQDQGLCLV  209 (351)
Q Consensus       130 ~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~~~~~~~~~~~~l~  209 (351)
                      +++|.+++..    +..+++..++.++.||+.||.|||++||+||||||+||+++                 .++.++|+
T Consensus        80 ~~~L~~~~~~----~~~~~~~~~~~~~~qi~~~L~~lH~~giiHrDlkp~Nili~-----------------~~~~~kl~  138 (325)
T cd05602          80 GGELFYHLQR----ERCFLEPRARFYAAEIASALGYLHSLNIVYRDLKPENILLD-----------------SQGHIVLT  138 (325)
T ss_pred             CCcHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEEC-----------------CCCCEEEc
Confidence            9999999877    46788999999999999999999999999999999999998                 67789999


Q ss_pred             ecCCccccccCCCCccccccccCCCcccceeccCCCCCccchHhHHHHHHHHHHhCccccccccCCCCCceeeecCcchh
Q 018699          210 DWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQEKKPWKFQVDTYGLCAIVHMMLHNSYMEIEKKASPDGGLVYLPKLSFK  289 (351)
Q Consensus       210 Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~  289 (351)
                      |||++....  .........+|++.|+|||++.+..++.++|||||||++|+|++|..||...................+
T Consensus       139 DfG~a~~~~--~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~  216 (325)
T cd05602         139 DFGLCKENI--EHNGTTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTAEMYDNILNKPLQLK  216 (325)
T ss_pred             cCCCCcccc--cCCCCcccccCCccccCHHHHcCCCCCCccccccccHHHHHHhcCCCCCCCCCHHHHHHHHHhCCcCCC
Confidence            999886422  112223455789999999999999999999999999999999999999975443211111111122222


Q ss_pred             hhhHHHHHHHHHHHHhcCCCCCChHHH----HHHHHHH
Q 018699          290 RYWKVELWKSLFTNLLNMSSGNDKEVL----QNLQKSF  323 (351)
Q Consensus       290 ~~~~~~~~~~li~~~L~~dP~~R~s~~----e~l~~~~  323 (351)
                      ...+ ..+.++|.+||++||.+|+++.    +++.|+|
T Consensus       217 ~~~~-~~~~~li~~~l~~~p~~R~~~~~~~~~i~~~~~  253 (325)
T cd05602         217 PNIT-NSARHLLEGLLQKDRTKRLGAKDDFMEIKNHIF  253 (325)
T ss_pred             CCCC-HHHHHHHHHHcccCHHHCCCCCCCHHHHhcCcc
Confidence            2334 7899999999999999999876    5666664

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt

>cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase

Probab=100.00  E-value=6.7e-41  Score=309.26  Aligned_cols=256  Identities=17%  Similarity=0.244  Sum_probs=196.8

Q ss_pred             EEcCeeEEEEEEeeccCceEEEEEEecCCCCceEEEEecCCCCCh---HHHHHHHHHhhhccccccccccceeeecccCe
Q 018699           44 EIGGKKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFPW---EFYMYRQLDQRISGRERSSFGFAHRIHLYSDY  120 (351)
Q Consensus        44 ~i~~~~Y~i~~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~~~---e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  120 (351)
                      .+..++|++.+.||+|+||+||+|+ +..+++.||+|++.+....   ....+...........+++++.....+..++.
T Consensus        39 ~~~~~~y~~~~~lg~G~~g~Vy~~~-~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~h~~iv~~~~~~~~~~~  117 (370)
T cd05596          39 RMKAEDFDVIKVIGRGAFGEVQLVR-HKSSKQVYAMKLLSKFEMIKRSDSAFFWEERDIMAHANSEWIVQLHYAFQDDKY  117 (370)
T ss_pred             CCCHHHcEEEEEEeeCCCEEEEEEE-ECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCcceEEEEEecCCE
Confidence            4456799999999999999999999 5678899999998643211   11122222233445567888888888888889


Q ss_pred             eEEEEEecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeeccCCCCC
Q 018699          121 SILVCDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSGP  200 (351)
Q Consensus       121 ~~lv~e~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~~~~~  200 (351)
                      .|+||||+++|+|.+++..     ..+++..+..++.|++.||+|||++||+||||||+||+++                
T Consensus       118 ~~lv~Ey~~gg~L~~~l~~-----~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDLkp~NILl~----------------  176 (370)
T cd05596         118 LYMVMEYMPGGDLVNLMSN-----YDIPEKWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLLD----------------  176 (370)
T ss_pred             EEEEEcCCCCCcHHHHHHh-----cCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEEc----------------
Confidence            9999999999999998865     4688999999999999999999999999999999999999                


Q ss_pred             cccCCeEEeecCCccccccCCCCccccccccCCCcccceeccCC----CCCccchHhHHHHHHHHHHhCccccccccCCC
Q 018699          201 WQDQGLCLVDWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQEKK----PWKFQVDTYGLCAIVHMMLHNSYMEIEKKASP  276 (351)
Q Consensus       201 ~~~~~~~l~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~----~~~~~~DiwslG~il~~l~~g~~p~~~~~~~~  276 (351)
                       .++.++|+|||++...... .........||+.|+|||++.+.    .++.++|||||||++|+|++|..||.......
T Consensus       177 -~~~~~kL~DfG~~~~~~~~-~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~  254 (370)
T cd05596         177 -KSGHLKLADFGTCMKMDAN-GMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVG  254 (370)
T ss_pred             -CCCCEEEEeccceeeccCC-CcccCCCCCCCcCeECHHHhccCCCCCCCCCceeeeehhHHHHHHHhCCCCcCCCCHHH
Confidence             7788999999998653211 11122345789999999998653    37899999999999999999999997654321


Q ss_pred             CCceee--ecCcchhh--hhHHHHHHHHHHHHhcCCCCC--ChHHHHHHHHHHH
Q 018699          277 DGGLVY--LPKLSFKR--YWKVELWKSLFTNLLNMSSGN--DKEVLQNLQKSFQ  324 (351)
Q Consensus       277 ~~~~~~--~~~~~~~~--~~~~~~~~~li~~~L~~dP~~--R~s~~e~l~~~~~  324 (351)
                      ......  .....++.  ..+ ..+++||.+||+.+|.+  |+++.+++.|+|.
T Consensus       255 ~~~~i~~~~~~~~~~~~~~~s-~~~~~li~~~L~~~p~r~~R~s~~ell~h~~~  307 (370)
T cd05596         255 TYSKIMDHKNSLTFPDDIEIS-KQAKDLICAFLTDREVRLGRNGVDEIKSHPFF  307 (370)
T ss_pred             HHHHHHcCCCcCCCCCcCCCC-HHHHHHHHHHccChhhccCCCCHHHHhcCccc
Confidence            100000  01112222  123 78999999999999998  9999999999863

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in

>cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants

Probab=100.00  E-value=8.6e-41  Score=305.23  Aligned_cols=252  Identities=17%  Similarity=0.256  Sum_probs=187.8

Q ss_pred             eEEEEEEeeccCceEEEEEEecCCCCceEEEEecCCCCCh---HHHHHHHHHhhhccccccccccceeeeccc-----Ce
Q 018699           49 KYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFPW---EFYMYRQLDQRISGRERSSFGFAHRIHLYS-----DY  120 (351)
Q Consensus        49 ~Y~i~~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~~~---e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~  120 (351)
                      +|++.+.||+|+||.||+|+ +..+++.||||.+......   .....+++ ..+....|++++....+....     ..
T Consensus         1 ry~i~~~lg~G~~g~V~~~~-~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~-~~l~~l~hpniv~~~~~~~~~~~~~~~~   78 (338)
T cd07859           1 RYKIQEVIGKGSYGVVCSAI-DTHTGEKVAIKKINDVFEHVSDATRILREI-KLLRLLRHPDIVEIKHIMLPPSRREFKD   78 (338)
T ss_pred             CeEEEEEEeecCCeEEEEEE-ECCCCCEEEEEEechhhccchhHHHHHHHH-HHHHhCCCCCEeeecceEeccCCCCCce
Confidence            69999999999999999999 5778899999988643221   11122222 223445677777766655322     35


Q ss_pred             eEEEEEecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeeccCCCCC
Q 018699          121 SILVCDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSGP  200 (351)
Q Consensus       121 ~~lv~e~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~~~~~  200 (351)
                      .|+||||+ +++|.+++..    +..+++..+..++.||+.||.|||++||+|+||||+||+++                
T Consensus        79 ~~lv~e~~-~~~L~~~l~~----~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIll~----------------  137 (338)
T cd07859          79 IYVVFELM-ESDLHQVIKA----NDDLTPEHHQFFLYQLLRALKYIHTANVFHRDLKPKNILAN----------------  137 (338)
T ss_pred             EEEEEecC-CCCHHHHHHh----cccCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEEC----------------
Confidence            79999999 5799998876    46799999999999999999999999999999999999999                


Q ss_pred             cccCCeEEeecCCccccccCCC-CccccccccCCCcccceeccC--CCCCccchHhHHHHHHHHHHhCccccccccCCCC
Q 018699          201 WQDQGLCLVDWGRGIDLHLFPD-NMEFEGDCRTSGFRCIEMQEK--KPWKFQVDTYGLCAIVHMMLHNSYMEIEKKASPD  277 (351)
Q Consensus       201 ~~~~~~~l~Dfg~a~~~~~~~~-~~~~~~~~g~~~y~aPE~~~~--~~~~~~~DiwslG~il~~l~~g~~p~~~~~~~~~  277 (351)
                       .++.++|+|||++........ ........|++.|+|||++.+  ..++.++|||||||++|+|++|.+||........
T Consensus       138 -~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~DvwSlGvvl~el~tg~~pf~~~~~~~~  216 (338)
T cd07859         138 -ADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQ  216 (338)
T ss_pred             -CCCcEEEccCccccccccccCccccccCCCCCCCcCCHHHHhccccccCchhHHHHHHHHHHHHHcCCCCCCCCChHHH
Confidence             778899999999864322111 112234578999999999865  6788999999999999999999999864332100


Q ss_pred             --------C--------------------ceeeecCcchhhh---hHHHHHHHHHHHHhcCCCCCChHHHHHHHHHHHH
Q 018699          278 --------G--------------------GLVYLPKLSFKRY---WKVELWKSLFTNLLNMSSGNDKEVLQNLQKSFQD  325 (351)
Q Consensus       278 --------~--------------------~~~~~~~~~~~~~---~~~~~~~~li~~~L~~dP~~R~s~~e~l~~~~~~  325 (351)
                              +                    .............   .+ +.+.++|.+||+.||++||++.+++.|||..
T Consensus       217 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~li~~~l~~~P~~Rpt~~e~l~hp~f~  294 (338)
T cd07859         217 LDLITDLLGTPSPETISRVRNEKARRYLSSMRKKQPVPFSQKFPNAD-PLALRLLERLLAFDPKDRPTAEEALADPYFK  294 (338)
T ss_pred             HHHHHHHhCCCCHHHHHHhhhhhHHHHHHhhcccCCCchHHhcCCCC-hHHHHHHHHHcCcCcccCCCHHHHhcCchhh
Confidence                    0                    0000011111111   12 5678999999999999999999999998754

Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos

>PHA03212 serine/threonine kinase US3; Provisional

Probab=100.00  E-value=2.6e-40  Score=306.87  Aligned_cols=251  Identities=16%  Similarity=0.168  Sum_probs=193.1

Q ss_pred             EEcCeeEEEEEEeeccCceEEEEEEecCCCCceEEEEecCCC-CChHHHHHHHHHhhhccccccccccceeeecccCeeE
Q 018699           44 EIGGKKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPA-FPWEFYMYRQLDQRISGRERSSFGFAHRIHLYSDYSI  122 (351)
Q Consensus        44 ~i~~~~Y~i~~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~-~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  122 (351)
                      .+..++|++.+.||+|+||.||+|. +..+++.||+|..... ...|..+       +....|++++.+...+......+
T Consensus        88 ~~~~~~y~~~~~lg~G~~g~V~~~~-d~~~~~~vaiK~~~~~~~~~E~~i-------l~~l~HpnIv~~~~~~~~~~~~~  159 (391)
T PHA03212         88 GIEKAGFSILETFTPGAEGFAFACI-DNKTCEHVVIKAGQRGGTATEAHI-------LRAINHPSIIQLKGTFTYNKFTC  159 (391)
T ss_pred             ccccCCcEEEEEEcCCCCeEEEEEE-ECCCCCEEEEechhhhhhHHHHHH-------HHhCCCCCCCCEeEEEEECCeeE
Confidence            3556789999999999999999999 6788999999986532 1122222       33446788888888888888999


Q ss_pred             EEEEecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeeccCCCCCcc
Q 018699          123 LVCDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSGPWQ  202 (351)
Q Consensus       123 lv~e~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~~~~~~~  202 (351)
                      +|+|++ +++|..++..    ...+++..++.++.||+.||.|||++||+||||||+||+++                 .
T Consensus       160 lv~e~~-~~~L~~~l~~----~~~l~~~~~~~i~~qi~~aL~ylH~~~IvHrDiKP~NIll~-----------------~  217 (391)
T PHA03212        160 LILPRY-KTDLYCYLAA----KRNIAICDILAIERSVLRAIQYLHENRIIHRDIKAENIFIN-----------------H  217 (391)
T ss_pred             EEEecC-CCCHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChHhEEEc-----------------C
Confidence            999999 5789888876    46788999999999999999999999999999999999998                 6


Q ss_pred             cCCeEEeecCCccccccCCCCccccccccCCCcccceeccCCCCCccchHhHHHHHHHHHHhCccccccccCCCCC----
Q 018699          203 DQGLCLVDWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQEKKPWKFQVDTYGLCAIVHMMLHNSYMEIEKKASPDG----  278 (351)
Q Consensus       203 ~~~~~l~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~p~~~~~~~~~~----  278 (351)
                      .+.++|+|||++...... .........||+.|+|||++.+..++.++|||||||++|+|++|..||.........    
T Consensus       218 ~~~vkL~DFG~a~~~~~~-~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~p~~~~~~~~~~~~~~  296 (391)
T PHA03212        218 PGDVCLGDFGAACFPVDI-NANKYYGWAGTIATNAPELLARDPYGPAVDIWSAGIVLFEMATCHDSLFEKDGLDGDCDSD  296 (391)
T ss_pred             CCCEEEEeCCcccccccc-cccccccccCccCCCChhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCcCCcccccccCchh
Confidence            778999999998532211 122334567999999999999889999999999999999999999887643221000    


Q ss_pred             ---------------ceeeec-----------------CcchhhhhH-----HHHHHHHHHHHhcCCCCCChHHHHHHHH
Q 018699          279 ---------------GLVYLP-----------------KLSFKRYWK-----VELWKSLFTNLLNMSSGNDKEVLQNLQK  321 (351)
Q Consensus       279 ---------------~~~~~~-----------------~~~~~~~~~-----~~~~~~li~~~L~~dP~~R~s~~e~l~~  321 (351)
                                     .+....                 .......|.     ...+.+||.+||..||.+|||+.|+|.|
T Consensus       297 ~~l~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~Li~~mL~~dP~~Rpta~elL~h  376 (391)
T PHA03212        297 RQIKLIIRRSGTHPNEFPIDAQANLDEIYIGLAKKSSRKPGSRPLWTNLYELPIDLEYLICKMLAFDAHHRPSAEALLDF  376 (391)
T ss_pred             HHHHHHHHHhcCChhhcCcchhHHHHHHHHHHHhccCCCCCCCCCHHHHhhhhhhHHHHHHHHhcCChhhCCCHHHHhcC
Confidence                           000000                 000000011     1578899999999999999999999999


Q ss_pred             HHHH
Q 018699          322 SFQD  325 (351)
Q Consensus       322 ~~~~  325 (351)
                      +|..
T Consensus       377 p~f~  380 (391)
T PHA03212        377 AAFQ  380 (391)
T ss_pred             hhhc
Confidence            8753

>cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1

Probab=100.00  E-value=1.3e-40  Score=303.24  Aligned_cols=257  Identities=15%  Similarity=0.103  Sum_probs=197.8

Q ss_pred             EcCeeEEEEEEeeccCceEEEEEEecCCCCceEEEEecCCCCChHH-HHHHHHHhhhccccccccccceeeecccCeeEE
Q 018699           45 IGGKKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFPWEF-YMYRQLDQRISGRERSSFGFAHRIHLYSDYSIL  123 (351)
Q Consensus        45 i~~~~Y~i~~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~~~e~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  123 (351)
                      +..++|++.++||.|+||+||+|. +..++..+|+|++........ ..+......+....|++++....++...+..++
T Consensus         2 l~~~~y~~~~~lg~g~~g~V~~~~-~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l   80 (333)
T cd06650           2 LKDDDFEKISELGAGNGGVVFKVS-HKPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISI   80 (333)
T ss_pred             cchhhhheeccccCCCCEEEEEEE-ECCCCcEEEEEEeecccCHHHHHHHHHHHHHHHHCCCCcccceeEEEEECCEEEE
Confidence            567899999999999999999999 567789999998876533221 112222233344568888888888888899999


Q ss_pred             EEEecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHC-CceecCCCCCcEEEeecCCcceeeccCCCCCcc
Q 018699          124 VCDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDV-GIIHGDFKPDNLLIRYARDELTVLDHDRSGPWQ  202 (351)
Q Consensus       124 v~e~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~-~i~H~dl~p~Nill~~~~~~~~~~~~~~~~~~~  202 (351)
                      ||||+++++|.+++..    ...+++..+..++.|++.|+.|||+. +|+|+||||+||+++                 .
T Consensus        81 v~e~~~~~~L~~~l~~----~~~~~~~~~~~~~~~l~~~l~~lH~~~~ivH~dlkp~Nili~-----------------~  139 (333)
T cd06650          81 CMEHMDGGSLDQVLKK----AGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVN-----------------S  139 (333)
T ss_pred             EEecCCCCcHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHhcCCEEecCCChhhEEEc-----------------C
Confidence            9999999999999976    46789999999999999999999985 799999999999998                 6


Q ss_pred             cCCeEEeecCCccccccCCCCccccccccCCCcccceeccCCCCCccchHhHHHHHHHHHHhCccccccccCCCC-----
Q 018699          203 DQGLCLVDWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQEKKPWKFQVDTYGLCAIVHMMLHNSYMEIEKKASPD-----  277 (351)
Q Consensus       203 ~~~~~l~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~p~~~~~~~~~-----  277 (351)
                      ++.++|+|||++.....    .......|+..|+|||++.+..++.++|+|||||++|+|++|..||........     
T Consensus       140 ~~~~kL~Dfg~~~~~~~----~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~~l~~g~~p~~~~~~~~~~~~~~  215 (333)
T cd06650         140 RGEIKLCDFGVSGQLID----SMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAIGRYPIPPPDAKELELMFG  215 (333)
T ss_pred             CCCEEEeeCCcchhhhh----hccccCCCCccccCHHHhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcchhHHHHHhc
Confidence            77899999998854321    112334688999999999988889999999999999999999999864321100     


Q ss_pred             ----Cce------------------------------------eeecCcchhhhhHHHHHHHHHHHHhcCCCCCChHHHH
Q 018699          278 ----GGL------------------------------------VYLPKLSFKRYWKVELWKSLFTNLLNMSSGNDKEVLQ  317 (351)
Q Consensus       278 ----~~~------------------------------------~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~e  317 (351)
                          +..                                    ........+....+..+++||.+||++||++||++.|
T Consensus       216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~~P~~Rpt~~e  295 (333)
T cd06650         216 CPVEGDPAESETSPRPRPPGRPLSSYGPDSRPPMAIFELLDYIVNEPPPKLPSGVFGAEFQDFVNKCLIKNPAERADLKQ  295 (333)
T ss_pred             CcccCCccccccCcccCCccchhhhhcccccccccHHHHHHHHhcCCCccCCCCCcCHHHHHHHHHhccCCcccCcCHHH
Confidence                000                                    0000000111111267899999999999999999999


Q ss_pred             HHHHHHHHHH
Q 018699          318 NLQKSFQDYL  327 (351)
Q Consensus       318 ~l~~~~~~~~  327 (351)
                      ++.|+|....
T Consensus       296 ll~h~~~~~~  305 (333)
T cd06650         296 LMVHAFIKRS  305 (333)
T ss_pred             HhhCHHHhcC
Confidence            9999886543

Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst

>cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1

Probab=100.00  E-value=1.3e-40  Score=296.19  Aligned_cols=249  Identities=18%  Similarity=0.168  Sum_probs=191.0

Q ss_pred             eeccCceEEEEEEecCCCCceEEEEecCCCCChHH---HHHHHHHhhhccccccccccceeeecccCeeEEEEEecCCCC
Q 018699           56 AGQGGFAKVFKAYVNGDPEDVVALKIQKPAFPWEF---YMYRQLDQRISGRERSSFGFAHRIHLYSDYSILVCDYLSQGT  132 (351)
Q Consensus        56 lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~~~e~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~s  132 (351)
                      ||+|+||+||+|. +..+++.||+|.+........   ..............+++++.....+..++..++||||+++++
T Consensus         1 lg~G~~g~Vy~~~-~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~g~   79 (280)
T cd05608           1 LGKGGFGEVSACQ-MRATGKLYACKKLNKKRLKKRKGYEGAMVEKRILAKVHSRFIVSLAYAFQTKTDLCLVMTIMNGGD   79 (280)
T ss_pred             CCCCCceeEEEEE-EccCCcEEEEEeeeHHHHhhhHHHHHHHHHHHHHHhCCCCcEeeeeEEEcCCCeEEEEEeCCCCCC
Confidence            6999999999999 567889999999865422111   111111223344567777777777777888999999999999


Q ss_pred             HHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeeccCCCCCcccCCeEEeecC
Q 018699          133 LQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSGPWQDQGLCLVDWG  212 (351)
Q Consensus       133 L~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~~~~~~~~~~~~l~Dfg  212 (351)
                      |...+......+..+++..++.++.||+.|+.|||++||+|+||+|+||+++                 .++.++|+|||
T Consensus        80 L~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nili~-----------------~~~~~~l~dfg  142 (280)
T cd05608          80 LRYHIYNVDEENPGFPEPRACFYTAQIISGLEHLHQRRIIYRDLKPENVLLD-----------------NDGNVRISDLG  142 (280)
T ss_pred             HHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEC-----------------CCCCEEEeeCc
Confidence            9988765433356799999999999999999999999999999999999998                 67789999999


Q ss_pred             CccccccCCCCccccccccCCCcccceeccCCCCCccchHhHHHHHHHHHHhCccccccccCCCCC----ceeeecCcch
Q 018699          213 RGIDLHLFPDNMEFEGDCRTSGFRCIEMQEKKPWKFQVDTYGLCAIVHMMLHNSYMEIEKKASPDG----GLVYLPKLSF  288 (351)
Q Consensus       213 ~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~p~~~~~~~~~~----~~~~~~~~~~  288 (351)
                      ++.....  .........|++.|+|||.+.+..++.++||||+||++|+|++|..||.........    .........+
T Consensus       143 ~~~~~~~--~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~  220 (280)
T cd05608         143 LAVELKD--GQSKTKGYAGTPGFMAPELLQGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRILNDSVTY  220 (280)
T ss_pred             cceecCC--CCccccccCCCcCccCHHHhcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCcchhHHHHHHhhcccCCCC
Confidence            8864321  122233457899999999999999999999999999999999999999754322110    1111222233


Q ss_pred             hhhhHHHHHHHHHHHHhcCCCCCCh-----HHHHHHHHHHHH
Q 018699          289 KRYWKVELWKSLFTNLLNMSSGNDK-----EVLQNLQKSFQD  325 (351)
Q Consensus       289 ~~~~~~~~~~~li~~~L~~dP~~R~-----s~~e~l~~~~~~  325 (351)
                      +...+ ..+.+++.+||+.||++||     ++++++.|||..
T Consensus       221 ~~~~~-~~~~~li~~~l~~~P~~R~~~~~~~~~~~l~h~~~~  261 (280)
T cd05608         221 PDKFS-PASKSFCEALLAKDPEKRLGFRDGNCDGLRTHPLFR  261 (280)
T ss_pred             cccCC-HHHHHHHHHHhcCCHHHhcCCCCCCHHHHhcChhhh
Confidence            33344 7899999999999999999     789999998754

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g

>KOG0690 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=4.1e-42  Score=291.53  Aligned_cols=260  Identities=19%  Similarity=0.235  Sum_probs=216.8

Q ss_pred             cceEEEEcCeeEEEEEEeeccCceEEEEEEecCCCCceEEEEecCCCCCh---HHHHHHHHHhhhccccccccccceeee
Q 018699           39 RNKTIEIGGKKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFPW---EFYMYRQLDQRISGRERSSFGFAHRIH  115 (351)
Q Consensus        39 ~~~~~~i~~~~Y~i~~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~~~---e~~~~~~~~~~~~~~~~~~~~~~~~~~  115 (351)
                      +...++.  ++|...++||+|.||.|.+|+ ...+++.+|||+++++...   |+..-....+.+....||.+..+.-.+
T Consensus       161 ~~~kvTm--~dFdfLKvLGkGTFGKVIL~r-EKat~k~YAiKIlkKeviiakdEVAHTlTE~RVL~~~~HPFLt~LKYsF  237 (516)
T KOG0690|consen  161 RKNKVTM--EDFDFLKVLGKGTFGKVILCR-EKATGKLYAIKILKKEVIIAKDEVAHTLTENRVLQNCRHPFLTSLKYSF  237 (516)
T ss_pred             ccceecc--chhhHHHHhcCCccceEEEEe-ecccCceeehhhhhhhheeehHHhhhhhhHHHHHHhccCcHHHHhhhhh
Confidence            3334444  588899999999999999999 6889999999999876432   222222223344455566655555566


Q ss_pred             cccCeeEEEEEecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeecc
Q 018699          116 LYSDYSILVCDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDH  195 (351)
Q Consensus       116 ~~~~~~~lv~e~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~  195 (351)
                      +..+.+|+||||..||.|.-.+++    ...+++..++.+..+|+.||.|||+++||+||+|.+|+++|           
T Consensus       238 Qt~drlCFVMeyanGGeLf~HLsr----er~FsE~RtRFYGaEIvsAL~YLHs~~ivYRDlKLENLlLD-----------  302 (516)
T KOG0690|consen  238 QTQDRLCFVMEYANGGELFFHLSR----ERVFSEDRTRFYGAEIVSALGYLHSRNIVYRDLKLENLLLD-----------  302 (516)
T ss_pred             ccCceEEEEEEEccCceEeeehhh----hhcccchhhhhhhHHHHHHhhhhhhCCeeeeechhhhheec-----------
Confidence            778999999999999999999888    46899999999999999999999999999999999999999           


Q ss_pred             CCCCCcccCCeEEeecCCccccccCCCCccccccccCCCcccceeccCCCCCccchHhHHHHHHHHHHhCccccccccCC
Q 018699          196 DRSGPWQDQGLCLVDWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQEKKPWKFQVDTYGLCAIVHMMLHNSYMEIEKKAS  275 (351)
Q Consensus       196 ~~~~~~~~~~~~l~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~p~~~~~~~  275 (351)
                            .+|.+||+|||++....  ..+....+.||||.|+|||++....|+.++|+|.+||++|+|++|+.||......
T Consensus       303 ------kDGHIKitDFGLCKE~I--~~g~t~kTFCGTPEYLAPEVleDnDYgraVDWWG~GVVMYEMmCGRLPFyn~dh~  374 (516)
T KOG0690|consen  303 ------KDGHIKITDFGLCKEEI--KYGDTTKTFCGTPEYLAPEVLEDNDYGRAVDWWGVGVVMYEMMCGRLPFYNKDHE  374 (516)
T ss_pred             ------cCCceEeeecccchhcc--cccceeccccCChhhcCchhhccccccceeehhhhhHHHHHHHhccCcccccchh
Confidence                  88999999999987532  2345678899999999999999999999999999999999999999999987766


Q ss_pred             CCCceeeecCcchhhhhHHHHHHHHHHHHhcCCCCCCh-----HHHHHHHHHHHH
Q 018699          276 PDGGLVYLPKLSFKRYWKVELWKSLFTNLLNMSSGNDK-----EVLQNLQKSFQD  325 (351)
Q Consensus       276 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~-----s~~e~l~~~~~~  325 (351)
                      .....+......+|+..+ ++++.|+..+|.+||.+|.     .+.++.+|.|..
T Consensus       375 kLFeLIl~ed~kFPr~ls-~eAktLLsGLL~kdP~kRLGgGpdDakEi~~h~FF~  428 (516)
T KOG0690|consen  375 KLFELILMEDLKFPRTLS-PEAKTLLSGLLKKDPKKRLGGGPDDAKEIMRHRFFA  428 (516)
T ss_pred             HHHHHHHhhhccCCccCC-HHHHHHHHHHhhcChHhhcCCCchhHHHHHhhhhhc
Confidence            555556667778888888 9999999999999999995     578888888743

>cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1

Probab=100.00  E-value=4.2e-41  Score=312.38  Aligned_cols=252  Identities=18%  Similarity=0.185  Sum_probs=193.1

Q ss_pred             eEEEEEEeeccCceEEEEEEecCCCCceEEEEecCCCCCh---HHHHHHHHHhhhccccccccccceeeecccCeeEEEE
Q 018699           49 KYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFPW---EFYMYRQLDQRISGRERSSFGFAHRIHLYSDYSILVC  125 (351)
Q Consensus        49 ~Y~i~~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~~~---e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~  125 (351)
                      +|++.+.||+|+||+||+|+ +..+++.||+|++.+....   ....+......+....+++++.....+..++.+|+||
T Consensus         2 ~f~~~~~LG~G~~g~Vy~a~-~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~~~h~~iv~~~~~~~~~~~~~lv~   80 (382)
T cd05625           2 MFVKIKTLGIGAFGEVCLAR-KVDTKALYAMKTLRKKDVLLRNQVAHVKAERDILAEADNEWVVRLYYSFQDKDNLYFVM   80 (382)
T ss_pred             CcEEEEEEEeCCCEEEEEEE-ECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhCCCCcCCeEEEEEEeCCEEEEEE
Confidence            69999999999999999999 5778899999998754221   1112222223344556788888888888889999999


Q ss_pred             EecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeeccCCCCCcccCC
Q 018699          126 DYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSGPWQDQG  205 (351)
Q Consensus       126 e~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~~~~~~~~~~  205 (351)
                      ||+++|+|.+++..    ...+++..++.++.||+.||.|||++||+||||||+||+++                 .++.
T Consensus        81 E~~~gg~L~~~l~~----~~~~~e~~~~~~~~qi~~al~~lH~~~ivHrDlKp~NILl~-----------------~~g~  139 (382)
T cd05625          81 DYIPGGDMMSLLIR----MGIFPEDLARFYIAELTCAVESVHKMGFIHRDIKPDNILID-----------------RDGH  139 (382)
T ss_pred             eCCCCCcHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEC-----------------CCCC
Confidence            99999999999876    46789999999999999999999999999999999999999                 7788


Q ss_pred             eEEeecCCccccccCCC---------------------------------------------CccccccccCCCccccee
Q 018699          206 LCLVDWGRGIDLHLFPD---------------------------------------------NMEFEGDCRTSGFRCIEM  240 (351)
Q Consensus       206 ~~l~Dfg~a~~~~~~~~---------------------------------------------~~~~~~~~g~~~y~aPE~  240 (351)
                      ++|+|||++........                                             .......+||+.|+|||+
T Consensus       140 ~kL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~  219 (382)
T cd05625         140 IKLTDFGLCTGFRWTHDSKYYQSGDHVRQDSMDFSNEWGDPANCRCGDRLKPLERRAARQHQRCLAHSLVGTPNYIAPEV  219 (382)
T ss_pred             EEEeECCCCccccccccccccccccccccccccccccccccccccccccccchhhhhccccccccccccccCcccCCHHH
Confidence            99999998743211000                                             000123468999999999


Q ss_pred             ccCCCCCccchHhHHHHHHHHHHhCccccccccCCCCCce--eeecCcchh--hhhHHHHHHHHHHHHhcCCCCCChH--
Q 018699          241 QEKKPWKFQVDTYGLCAIVHMMLHNSYMEIEKKASPDGGL--VYLPKLSFK--RYWKVELWKSLFTNLLNMSSGNDKE--  314 (351)
Q Consensus       241 ~~~~~~~~~~DiwslG~il~~l~~g~~p~~~~~~~~~~~~--~~~~~~~~~--~~~~~~~~~~li~~~L~~dP~~R~s--  314 (351)
                      +.+..++.++|||||||++|+|++|..||...........  ........|  ...+ +.+.++|.+|+ .+|.+|++  
T Consensus       220 ~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s-~~~~~li~~l~-~~p~~R~~~~  297 (382)
T cd05625         220 LLRTGYTQLCDWWSVGVILYEMLVGQPPFLAQTPLETQMKVINWQTSLHIPPQAKLS-PEASDLIIKLC-RGPEDRLGKN  297 (382)
T ss_pred             hcCCCCCCeeeEEechHHHHHHHhCCCCCCCCCHHHHHHHHHccCCCcCCCCcccCC-HHHHHHHHHHc-cCHhHcCCCC
Confidence            9998999999999999999999999999976543211000  001111111  1223 78899999986 59999997  


Q ss_pred             -HHHHHHHHHH
Q 018699          315 -VLQNLQKSFQ  324 (351)
Q Consensus       315 -~~e~l~~~~~  324 (351)
                       +.++++|||.
T Consensus       298 ~~~ei~~hp~f  308 (382)
T cd05625         298 GADEIKAHPFF  308 (382)
T ss_pred             CHHHHhcCCCc
Confidence             9999999874

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an

>cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2

Probab=100.00  E-value=2.4e-41  Score=306.78  Aligned_cols=245  Identities=19%  Similarity=0.190  Sum_probs=190.7

Q ss_pred             EEeeccCceEEEEEEecCCCCceEEEEecCCCCCh----HHHHHHHHHhhhccccccccccceeeecccCeeEEEEEecC
Q 018699           54 GCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFPW----EFYMYRQLDQRISGRERSSFGFAHRIHLYSDYSILVCDYLS  129 (351)
Q Consensus        54 ~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~~~----e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~  129 (351)
                      +.||+|+||+||+|+ +..+++.||+|++.+....    ....+.+.........|++++.....+...+..|+||||++
T Consensus         1 ~~lg~G~~g~Vy~~~-~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~iv~~~~~~~~~~~~~lv~e~~~   79 (321)
T cd05603           1 KVIGKGSFGKVLLAK-RKSDGSFYAVKVLQKKTILKKKEQNHIMAERNVLLKNLKHPFLVGLHYSFQTAEKLYFVLDYVN   79 (321)
T ss_pred             CeeeeCCCEEEEEEE-ECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHHhCCCCCccceeeEEEcCCEEEEEEcCCC
Confidence            479999999999999 5778899999998653221    11222222223445678888888888888889999999999


Q ss_pred             CCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeeccCCCCCcccCCeEEe
Q 018699          130 QGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSGPWQDQGLCLV  209 (351)
Q Consensus       130 ~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~~~~~~~~~~~~l~  209 (351)
                      +++|...+..    ...+++..+..++.||+.||.|||++||+||||||+||+++                 .++.++|+
T Consensus        80 ~~~L~~~l~~----~~~~~~~~~~~~~~qi~~~L~~lH~~~ivH~Dlkp~NIll~-----------------~~~~~kl~  138 (321)
T cd05603          80 GGELFFHLQR----ERCFLEPRARFYAAEVASAIGYLHSLNIIYRDLKPENILLD-----------------SQGHVVLT  138 (321)
T ss_pred             CCCHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeEEC-----------------CCCCEEEc
Confidence            9999988876    46789999999999999999999999999999999999999                 77889999


Q ss_pred             ecCCccccccCCCCccccccccCCCcccceeccCCCCCccchHhHHHHHHHHHHhCccccccccCCCCCceeeecCcchh
Q 018699          210 DWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQEKKPWKFQVDTYGLCAIVHMMLHNSYMEIEKKASPDGGLVYLPKLSFK  289 (351)
Q Consensus       210 Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~  289 (351)
                      |||++....  ..........|++.|+|||++.+..++.++|||||||++|+|++|..||...+..............++
T Consensus       139 Dfg~~~~~~--~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~  216 (321)
T cd05603         139 DFGLCKEGV--EPEETTSTFCGTPEYLAPEVLRKEPYDRTVDWWCLGAVLYEMLYGLPPFYSRDVSQMYDNILHKPLQLP  216 (321)
T ss_pred             cCCCCccCC--CCCCccccccCCcccCCHHHhcCCCCCCcCcccccchhhhhhhcCCCCCCCCCHHHHHHHHhcCCCCCC
Confidence            999886421  112223445789999999999988899999999999999999999999976542211111112223333


Q ss_pred             hhhHHHHHHHHHHHHhcCCCCCChHHH----HHHHHHH
Q 018699          290 RYWKVELWKSLFTNLLNMSSGNDKEVL----QNLQKSF  323 (351)
Q Consensus       290 ~~~~~~~~~~li~~~L~~dP~~R~s~~----e~l~~~~  323 (351)
                      ...+ ..+.++|.+||+.||.+|+++.    +++.|+|
T Consensus       217 ~~~~-~~~~~li~~~l~~~p~~R~~~~~~~~~~~~~~~  253 (321)
T cd05603         217 GGKT-VAACDLLVGLLHKDQRRRLGAKADFLEIKNHVF  253 (321)
T ss_pred             CCCC-HHHHHHHHHHccCCHhhcCCCCCCHHHHhCCCC
Confidence            3344 7889999999999999999764    7777765

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1.

>cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2

Probab=100.00  E-value=4.3e-40  Score=303.09  Aligned_cols=250  Identities=19%  Similarity=0.238  Sum_probs=187.7

Q ss_pred             CeeEEEEEEeeccCceEEEEEEecCCCCceEEEEecCCCCChH---HHHHHHHHhhhccccccccccceeeeccc-----
Q 018699           47 GKKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFPWE---FYMYRQLDQRISGRERSSFGFAHRIHLYS-----  118 (351)
Q Consensus        47 ~~~Y~i~~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~~~e---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----  118 (351)
                      .++|++.+.||+|+||+||+|. +..+|+.||+|++.......   ....++ ........|+++.....++...     
T Consensus        20 ~~~y~~~~~lg~G~~g~V~~~~-~~~~~~~vavK~~~~~~~~~~~~~~~~~E-~~~l~~l~h~niv~~~~~~~~~~~~~~   97 (359)
T cd07876          20 LKRYQQLKPIGSGAQGIVCAAF-DTVLGINVAVKKLSRPFQNQTHAKRAYRE-LVLLKCVNHKNIISLLNVFTPQKSLEE   97 (359)
T ss_pred             hhceEEEEEeecCCCEEEEEEE-EcCCCceeEEEEecccccchhHHHHHHHH-HHHHHhCCCCCEeeeeeeeccCCCccc
Confidence            4789999999999999999999 57788999999987543221   122222 2233445677777777665432     


Q ss_pred             -CeeEEEEEecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeeccCC
Q 018699          119 -DYSILVCDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDR  197 (351)
Q Consensus       119 -~~~~lv~e~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~~  197 (351)
                       ...|+||||+. ++|.+.+..      .+++..+..++.|++.||.|||++||+||||||+||+++             
T Consensus        98 ~~~~~lv~e~~~-~~l~~~~~~------~~~~~~~~~~~~qi~~~L~~LH~~~ivHrDlkp~NIl~~-------------  157 (359)
T cd07876          98 FQDVYLVMELMD-ANLCQVIHM------ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVK-------------  157 (359)
T ss_pred             cceeEEEEeCCC-cCHHHHHhc------cCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEEC-------------
Confidence             35799999995 567766543      478888999999999999999999999999999999999             


Q ss_pred             CCCcccCCeEEeecCCccccccCCCCccccccccCCCcccceeccCCCCCccchHhHHHHHHHHHHhCccccccccCCCC
Q 018699          198 SGPWQDQGLCLVDWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQEKKPWKFQVDTYGLCAIVHMMLHNSYMEIEKKASPD  277 (351)
Q Consensus       198 ~~~~~~~~~~l~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~p~~~~~~~~~  277 (351)
                          .++.++|+|||++....   .........+|+.|+|||++.+..++.++|||||||++|+|++|..||...+....
T Consensus       158 ----~~~~~kl~Dfg~a~~~~---~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~el~tg~~pf~~~~~~~~  230 (359)
T cd07876         158 ----SDCTLKILDFGLARTAC---TNFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELVKGSVIFQGTDHIDQ  230 (359)
T ss_pred             ----CCCCEEEecCCCccccc---cCccCCCCcccCCCCCchhccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHH
Confidence                77889999999986422   12223445689999999999999999999999999999999999999964332100


Q ss_pred             ------------------------------Cce------------eeecCcchhhhhHHHHHHHHHHHHhcCCCCCChHH
Q 018699          278 ------------------------------GGL------------VYLPKLSFKRYWKVELWKSLFTNLLNMSSGNDKEV  315 (351)
Q Consensus       278 ------------------------------~~~------------~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~  315 (351)
                                                    ..+            ............+ +.+++||.+||.+||++|||+
T Consensus       231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~li~~mL~~dP~~R~t~  309 (359)
T cd07876         231 WNKVIEQLGTPSAEFMNRLQPTVRNYVENRPQYPGISFEELFPDWIFPSESERDKLKT-SQARDLLSKMLVIDPDKRISV  309 (359)
T ss_pred             HHHHHHhcCCCcHHHHHHHHHHHHHHHhhCCCCCCcchhhhccccccccccccccccc-hhHHHHHHHHhccCcccCCCH
Confidence                                          000            0000000000112 578999999999999999999


Q ss_pred             HHHHHHHHHHH
Q 018699          316 LQNLQKSFQDY  326 (351)
Q Consensus       316 ~e~l~~~~~~~  326 (351)
                      .|+|.|||...
T Consensus       310 ~e~l~hp~~~~  320 (359)
T cd07876         310 DEALRHPYITV  320 (359)
T ss_pred             HHHhcCchhhh
Confidence            99999998654

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn

>KOG0596 consensus Dual specificity; serine/threonine and tyrosine kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=100.00  E-value=4.7e-41  Score=302.52  Aligned_cols=261  Identities=20%  Similarity=0.244  Sum_probs=197.6

Q ss_pred             CCCcceEEEEcCeeEEEEEEeeccCceEEEEEEecCCCCceEEEEecCC-C--------CChHHHHHHHHHhhhcccccc
Q 018699           36 NSSRNKTIEIGGKKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKP-A--------FPWEFYMYRQLDQRISGRERS  106 (351)
Q Consensus        36 ~~~~~~~~~i~~~~Y~i~~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~-~--------~~~e~~~~~~~~~~~~~~~~~  106 (351)
                      ++.....+.++|..|++.++||+||.+.||++. ..+. +.+|+|.+.. .        +.+|...+..+.      .+.
T Consensus       349 ~~~~~~~i~Vkg~~Yeilk~iG~GGSSkV~kV~-~s~~-~iyalkkv~~~~~D~qtl~gy~nEI~lL~KLk------g~~  420 (677)
T KOG0596|consen  349 SSSANEIIKVKGREYEILKQIGSGGSSKVFKVL-NSDK-QIYALKKVVLLEADNQTLDGYRNEIALLNKLK------GHD  420 (677)
T ss_pred             CCCcCeeEEECcchhhHHHhhcCCCcceeeeee-cCCC-cchhhhHHHHhhcCHHHHHHHHHHHHHHHHhc------CCc
Confidence            444567899999999999999999999999998 4444 5556655432 1        223333333332      335


Q ss_pred             ccccceeeecccCeeEEEEEecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeec
Q 018699          107 SFGFAHRIHLYSDYSILVCDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYA  186 (351)
Q Consensus       107 ~~~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~  186 (351)
                      .++.+.++...++++|+|||+- ..+|..++++.   ....+...++.+.+||+.++.++|.+||||.||||.|+++-  
T Consensus       421 ~IIqL~DYEv~d~~lYmvmE~G-d~DL~kiL~k~---~~~~~~~~lk~ywkqML~aV~~IH~~gIVHSDLKPANFLlV--  494 (677)
T KOG0596|consen  421 KIIQLYDYEVTDGYLYMVMECG-DIDLNKILKKK---KSIDPDWFLKFYWKQMLLAVKTIHQHGIVHSDLKPANFLLV--  494 (677)
T ss_pred             eEEEEeeeeccCceEEEEeecc-cccHHHHHHhc---cCCCchHHHHHHHHHHHHHHHHHHHhceeecCCCcccEEEE--
Confidence            6777778888899999999987 77999999985   34455458899999999999999999999999999999996  


Q ss_pred             CCcceeeccCCCCCcccCCeEEeecCCccccccCCCCccccccccCCCcccceeccCC-----------CCCccchHhHH
Q 018699          187 RDELTVLDHDRSGPWQDQGLCLVDWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQEKK-----------PWKFQVDTYGL  255 (351)
Q Consensus       187 ~~~~~~~~~~~~~~~~~~~~~l~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~-----------~~~~~~Diwsl  255 (351)
                                      .|.+||+|||+|..+.....+-.....+||+.||+||.+...           ..+.++|||||
T Consensus       495 ----------------kG~LKLIDFGIA~aI~~DTTsI~kdsQvGT~NYMsPEAl~~~~s~~~~~~~k~Ki~r~SDvWSL  558 (677)
T KOG0596|consen  495 ----------------KGRLKLIDFGIANAIQPDTTSIVKDSQVGTVNYMSPEALTDMSSSRENGKSKIKISRKSDVWSL  558 (677)
T ss_pred             ----------------eeeEEeeeechhcccCccccceeeccccCcccccCHHHHhhccccccCCCcceeecCccchhhh
Confidence                            688999999999766544444445667899999999987322           24588999999


Q ss_pred             HHHHHHHHhCccccccccC-CCCCceeeec--CcchhhhhHHHHHHHHHHHHhcCCCCCChHHHHHHHHHHHHH
Q 018699          256 CAIVHMMLHNSYMEIEKKA-SPDGGLVYLP--KLSFKRYWKVELWKSLFTNLLNMSSGNDKEVLQNLQKSFQDY  326 (351)
Q Consensus       256 G~il~~l~~g~~p~~~~~~-~~~~~~~~~~--~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~~~~~~~  326 (351)
                      |||+|+|+.|+.||..-.. ......+..+  ..++|..-.+..+.++++.||..||.+|+++.++|+|||...
T Consensus       559 GCILYqMvYgktPf~~~~n~~aKl~aI~~P~~~Iefp~~~~~~~li~~mK~CL~rdPkkR~si~eLLqhpFl~~  632 (677)
T KOG0596|consen  559 GCILYQMVYGKTPFGQIINQIAKLHAITDPNHEIEFPDIPENDELIDVMKCCLARDPKKRWSIPELLQHPFLQI  632 (677)
T ss_pred             hhHHHHHHhcCCchHHHHHHHHHHHhhcCCCccccccCCCCchHHHHHHHHHHhcCcccCCCcHHHhcCccccc
Confidence            9999999999999964331 1111111122  223443333345899999999999999999999999998665

>cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase

Probab=100.00  E-value=4.6e-41  Score=306.10  Aligned_cols=253  Identities=20%  Similarity=0.259  Sum_probs=194.3

Q ss_pred             eeEEEEEEeeccCceEEEEEEecCCCCceEEEEecCCCCCh---HHHHHHHHHhhhccccccccccceeeecccCeeEEE
Q 018699           48 KKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFPW---EFYMYRQLDQRISGRERSSFGFAHRIHLYSDYSILV  124 (351)
Q Consensus        48 ~~Y~i~~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~~~---e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv  124 (351)
                      ++|++.+.||+|+||+||+|+ +..+++.||+|++......   ....+...........+++++.....+...+..|+|
T Consensus         1 ~~y~~~~~lg~G~~g~Vy~~~-~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~~~~i~~~~~~~~~~~~~~lv   79 (330)
T cd05601           1 KDFDVKSLVGRGHFGEVQVVR-EKATGDIYAMKVMKKSVLLAQETVSFFEEERDILSISNSPWIPQLQYAFQDKDNLYLV   79 (330)
T ss_pred             CCceEEEEEEeccCEEEEEEE-ECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceeeEEecCCeEEEE
Confidence            469999999999999999999 5678899999998754321   112222223334455677888877777778899999


Q ss_pred             EEecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeeccCCCCCcccC
Q 018699          125 CDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSGPWQDQ  204 (351)
Q Consensus       125 ~e~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~~~~~~~~~  204 (351)
                      |||+++++|.+++...   ...+++..++.++.|++.||.|||++||+||||||+||+++                 .++
T Consensus        80 ~e~~~~~~L~~~l~~~---~~~l~~~~~~~~~~qi~~aL~~lH~~~i~H~Dlkp~NIll~-----------------~~~  139 (330)
T cd05601          80 MEYQPGGDLLSLLNRY---EDQFDEDMAQFYLAELVLAIHSVHQMGYVHRDIKPENVLID-----------------RTG  139 (330)
T ss_pred             ECCCCCCCHHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHHCCeEcccCchHheEEC-----------------CCC
Confidence            9999999999999874   36799999999999999999999999999999999999999                 778


Q ss_pred             CeEEeecCCccccccCCCCccccccccCCCcccceecc------CCCCCccchHhHHHHHHHHHHhCccccccccCCCCC
Q 018699          205 GLCLVDWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQE------KKPWKFQVDTYGLCAIVHMMLHNSYMEIEKKASPDG  278 (351)
Q Consensus       205 ~~~l~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~------~~~~~~~~DiwslG~il~~l~~g~~p~~~~~~~~~~  278 (351)
                      .++|+|||++....... ........||+.|+|||++.      +..++.++|||||||++|+|++|..||.........
T Consensus       140 ~~kL~Dfg~a~~~~~~~-~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~  218 (330)
T cd05601         140 HIKLADFGSAARLTANK-MVNSKLPVGTPDYIAPEVLTTMNGDGKGTYGVECDWWSLGVIAYEMIYGRSPFHEGTSAKTY  218 (330)
T ss_pred             CEEeccCCCCeECCCCC-ceeeecccCCccccCHHHhccccccccCCCCCcceeecccceeeeeccCCCCCCCCCHHHHH
Confidence            89999999986533111 11122346899999999986      456789999999999999999999999754322100


Q ss_pred             cee--eecCcchh--hhhHHHHHHHHHHHHhcCCCCCChHHHHHHHHHHH
Q 018699          279 GLV--YLPKLSFK--RYWKVELWKSLFTNLLNMSSGNDKEVLQNLQKSFQ  324 (351)
Q Consensus       279 ~~~--~~~~~~~~--~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~~~~~  324 (351)
                      ...  ......++  ...+ ..+.+||.+||. +|.+||++.+++.|||-
T Consensus       219 ~~i~~~~~~~~~~~~~~~~-~~~~~li~~ll~-~p~~R~t~~~l~~h~~~  266 (330)
T cd05601         219 NNIMNFQRFLKFPEDPKVS-SDFLDLIQSLLC-GQKERLGYEGLCCHPFF  266 (330)
T ss_pred             HHHHcCCCccCCCCCCCCC-HHHHHHHHHHcc-ChhhCCCHHHHhCCCCc
Confidence            000  00001111  1223 788999999998 99999999999999874

Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor

>cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor

Probab=100.00  E-value=4e-41  Score=311.88  Aligned_cols=254  Identities=19%  Similarity=0.189  Sum_probs=192.9

Q ss_pred             eeEEEEEEeeccCceEEEEEEecCCCCceEEEEecCCCCCh---HHHHHHHHHhhhccccccccccceeeecccCeeEEE
Q 018699           48 KKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFPW---EFYMYRQLDQRISGRERSSFGFAHRIHLYSDYSILV  124 (351)
Q Consensus        48 ~~Y~i~~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~~~---e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv  124 (351)
                      ++|++.+.||+|+||+||+|+ +..+++.||+|++.+....   ....+......+....+++++.....+..++.+|+|
T Consensus         1 ~~y~~~~~lG~G~~g~V~~a~-~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv   79 (376)
T cd05598           1 SMFVKIKTIGIGAFGEVCLVR-KVDTNALYAMKTLRKADVLMRNQAAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFV   79 (376)
T ss_pred             CCceEEEEEEeCCCeEEEEEE-ECCCCCEEEEEEEcHHHHHhhhhHHHHHHHHHHHHhCCCCCcceEEEEEEcCCEEEEE
Confidence            369999999999999999999 5677999999998643211   111112222233445677888888888888999999


Q ss_pred             EEecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeeccCCCCCcccC
Q 018699          125 CDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSGPWQDQ  204 (351)
Q Consensus       125 ~e~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~~~~~~~~~  204 (351)
                      |||+++++|.+++..    ...+++..++.++.||+.||+|||++||+||||||+||+++                 .++
T Consensus        80 ~E~~~~g~L~~~i~~----~~~~~~~~~~~~~~qi~~al~~lH~~~ivHrDlkp~Nill~-----------------~~~  138 (376)
T cd05598          80 MDYIPGGDMMSLLIR----LGIFEEDLARFYIAELTCAIESVHKMGFIHRDIKPDNILID-----------------RDG  138 (376)
T ss_pred             EeCCCCCcHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCCHHHEEEC-----------------CCC
Confidence            999999999999977    46789999999999999999999999999999999999999                 778


Q ss_pred             CeEEeecCCccccccCCC-----------------------------------------CccccccccCCCcccceeccC
Q 018699          205 GLCLVDWGRGIDLHLFPD-----------------------------------------NMEFEGDCRTSGFRCIEMQEK  243 (351)
Q Consensus       205 ~~~l~Dfg~a~~~~~~~~-----------------------------------------~~~~~~~~g~~~y~aPE~~~~  243 (351)
                      .++|+|||++........                                         .......+||+.|+|||++.+
T Consensus       139 ~ikL~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~  218 (376)
T cd05598         139 HIKLTDFGLCTGFRWTHDSKYYQKGDHHRQDSMEPSEEWSEIDRCRLKPLERRRKRQHQRCLAHSLVGTPNYIAPEVLLR  218 (376)
T ss_pred             CEEEEeCCCCccccccccccccccccccccccccccccccccccccccchhhhhhhhcccccccccCCCccccCHHHHcC
Confidence            899999998742210000                                         000113468999999999999


Q ss_pred             CCCCccchHhHHHHHHHHHHhCccccccccCCCCCce--eeecCcchh--hhhHHHHHHHHHHHHhcCCCCCCh---HHH
Q 018699          244 KPWKFQVDTYGLCAIVHMMLHNSYMEIEKKASPDGGL--VYLPKLSFK--RYWKVELWKSLFTNLLNMSSGNDK---EVL  316 (351)
Q Consensus       244 ~~~~~~~DiwslG~il~~l~~g~~p~~~~~~~~~~~~--~~~~~~~~~--~~~~~~~~~~li~~~L~~dP~~R~---s~~  316 (351)
                      ..++.++|||||||++|+|++|..||...........  .+......+  ...+ ..+.++|.+|+ .+|.+|+   ++.
T Consensus       219 ~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s-~~~~~li~~l~-~~p~~R~~~~t~~  296 (376)
T cd05598         219 TGYTQLCDWWSVGVILYEMLVGQPPFLADTPAETQLKVINWETTLHIPSQAKLS-REASDLILRLC-CGAEDRLGKNGAD  296 (376)
T ss_pred             CCCCcceeeeeccceeeehhhCCCCCCCCCHHHHHHHHhccCccccCCCCCCCC-HHHHHHHHHHh-cCHhhcCCCCCHH
Confidence            9999999999999999999999999976543211000  000111111  1223 77889999977 5999999   999


Q ss_pred             HHHHHHHHH
Q 018699          317 QNLQKSFQD  325 (351)
Q Consensus       317 e~l~~~~~~  325 (351)
                      +++.|+|..
T Consensus       297 ell~h~~~~  305 (376)
T cd05598         297 EIKAHPFFK  305 (376)
T ss_pred             HHhCCCCcC
Confidence            999998743

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation.

>cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta

Probab=100.00  E-value=4.3e-41  Score=305.79  Aligned_cols=246  Identities=19%  Similarity=0.228  Sum_probs=190.6

Q ss_pred             EEeeccCceEEEEEEecCCCCceEEEEecCCCCChHH---HHHHHHHhh-hccccccccccceeeecccCeeEEEEEecC
Q 018699           54 GCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFPWEF---YMYRQLDQR-ISGRERSSFGFAHRIHLYSDYSILVCDYLS  129 (351)
Q Consensus        54 ~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~~~e~---~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~  129 (351)
                      +.||+|+||+||+|+ +..+++.||+|++.+......   ..+...... .....+++++.....+...+.+|+||||++
T Consensus         1 ~~lG~G~~g~V~~~~-~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~   79 (327)
T cd05617           1 RVIGRGSYAKVLLVR-LKKNDQIYAMKVVKKELVHDDEDIDWVQTEKHVFEQASSNPFLVGLHSCFQTTSRLFLVIEYVN   79 (327)
T ss_pred             CeeeeCCCeEEEEEE-ECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhhcCCCCEeeEEEEEEeCCEEEEEEeCCC
Confidence            479999999999999 567789999999876432211   111111111 122356778787887778889999999999


Q ss_pred             CCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeeccCCCCCcccCCeEEe
Q 018699          130 QGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSGPWQDQGLCLV  209 (351)
Q Consensus       130 ~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~~~~~~~~~~~~l~  209 (351)
                      +++|...+..    ...+++..++.++.||+.|++|||++||+||||||+||+++                 .++.++|+
T Consensus        80 ~~~L~~~~~~----~~~l~~~~~~~~~~qi~~al~~lH~~~ivHrDlkp~Nili~-----------------~~~~~kl~  138 (327)
T cd05617          80 GGDLMFHMQR----QRKLPEEHARFYAAEICIALNFLHERGIIYRDLKLDNVLLD-----------------ADGHIKLT  138 (327)
T ss_pred             CCcHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEEe-----------------CCCCEEEe
Confidence            9999998876    46799999999999999999999999999999999999999                 77889999


Q ss_pred             ecCCccccccCCCCccccccccCCCcccceeccCCCCCccchHhHHHHHHHHHHhCccccccccCCCCC-------ceee
Q 018699          210 DWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQEKKPWKFQVDTYGLCAIVHMMLHNSYMEIEKKASPDG-------GLVY  282 (351)
Q Consensus       210 Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~p~~~~~~~~~~-------~~~~  282 (351)
                      |||++....  .........+||+.|+|||++.+..++.++|||||||++|+|++|..||.........       ....
T Consensus       139 Dfg~~~~~~--~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~ell~g~~pf~~~~~~~~~~~~~~~~~~~~  216 (327)
T cd05617         139 DYGMCKEGL--GPGDTTSTFCGTPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPFDIITDNPDMNTEDYLFQVIL  216 (327)
T ss_pred             ccccceecc--CCCCceecccCCcccCCHHHHCCCCCCchheeehhHHHHHHHHhCCCCCCccCCCcccccHHHHHHHHH
Confidence            999886321  1222334567899999999999999999999999999999999999999643221110       0111


Q ss_pred             ecCcchhhhhHHHHHHHHHHHHhcCCCCCChH------HHHHHHHHHH
Q 018699          283 LPKLSFKRYWKVELWKSLFTNLLNMSSGNDKE------VLQNLQKSFQ  324 (351)
Q Consensus       283 ~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~s------~~e~l~~~~~  324 (351)
                      .....+|...+ ..+.++|.+||+.||.+|++      ..+++.|+|.
T Consensus       217 ~~~~~~p~~~~-~~~~~li~~~L~~dP~~R~~~~~~~~~~~i~~h~~f  263 (327)
T cd05617         217 EKPIRIPRFLS-VKASHVLKGFLNKDPKERLGCQPQTGFSDIKSHTFF  263 (327)
T ss_pred             hCCCCCCCCCC-HHHHHHHHHHhccCHHHcCCCCCCCCHHHHHcCCCC
Confidence            22333444455 78899999999999999997      4688889863

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways

>cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3

Probab=100.00  E-value=2.9e-41  Score=306.70  Aligned_cols=246  Identities=19%  Similarity=0.199  Sum_probs=190.2

Q ss_pred             EEeeccCceEEEEEEecCCCCceEEEEecCCCCCh----HHHHHHHHHhhhccccccccccceeeecccCeeEEEEEecC
Q 018699           54 GCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFPW----EFYMYRQLDQRISGRERSSFGFAHRIHLYSDYSILVCDYLS  129 (351)
Q Consensus        54 ~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~~~----e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~  129 (351)
                      +.||+|+||+||+|+ +..+|+.||+|++.+....    ......+.........|++++.+...+...+..|+||||++
T Consensus         1 ~~lG~G~~g~V~~~~-~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~hp~iv~~~~~~~~~~~~~lv~e~~~   79 (325)
T cd05604           1 KVIGKGSFGKVLLAK-RKLDGKCYAVKVLQKKIVLNRKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTTEKLYFVLDFVN   79 (325)
T ss_pred             CceeeCCCeEEEEEE-ECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHHhCCCCCCccEEEEEecCCEEEEEEcCCC
Confidence            469999999999999 5778899999998654211    11222222223345678888888888888899999999999


Q ss_pred             CCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeeccCCCCCcccCCeEEe
Q 018699          130 QGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSGPWQDQGLCLV  209 (351)
Q Consensus       130 ~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~~~~~~~~~~~~l~  209 (351)
                      +++|...+..    +..+++..+..++.||+.||.|||++||+||||||+||+++                 .++.++|+
T Consensus        80 ~~~L~~~l~~----~~~~~~~~~~~~~~qi~~al~~lH~~givH~Dlkp~NIll~-----------------~~~~~kL~  138 (325)
T cd05604          80 GGELFFHLQR----ERSFPEPRARFYAAEIASALGYLHSINIVYRDLKPENILLD-----------------SQGHVVLT  138 (325)
T ss_pred             CCCHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHeEEC-----------------CCCCEEEe
Confidence            9999988876    57899999999999999999999999999999999999999                 77889999


Q ss_pred             ecCCccccccCCCCccccccccCCCcccceeccCCCCCccchHhHHHHHHHHHHhCccccccccCCCCCceeeecCcchh
Q 018699          210 DWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQEKKPWKFQVDTYGLCAIVHMMLHNSYMEIEKKASPDGGLVYLPKLSFK  289 (351)
Q Consensus       210 Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~  289 (351)
                      |||++....  ..........|++.|+|||++.+..++.++|||||||++|+|++|..||...................+
T Consensus       139 DfG~~~~~~--~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~~pf~~~~~~~~~~~~~~~~~~~~  216 (325)
T cd05604         139 DFGLCKEGI--AQSDTTTTFCGTPEYLAPEVIRKQPYDNTVDWWCLGAVLYEMLYGLPPFYCRDVAEMYDNILHKPLVLR  216 (325)
T ss_pred             ecCCcccCC--CCCCCcccccCChhhCCHHHHcCCCCCCcCccccccceehhhhcCCCCCCCCCHHHHHHHHHcCCccCC
Confidence            999885421  112223445789999999999999999999999999999999999999975432211111111111122


Q ss_pred             hhhHHHHHHHHHHHHhcCCCCCChHH----HHHHHHHHH
Q 018699          290 RYWKVELWKSLFTNLLNMSSGNDKEV----LQNLQKSFQ  324 (351)
Q Consensus       290 ~~~~~~~~~~li~~~L~~dP~~R~s~----~e~l~~~~~  324 (351)
                      ...+ ..+.++|.+||..||.+||++    .+++.|+|.
T Consensus       217 ~~~~-~~~~~ll~~ll~~~p~~R~~~~~~~~~i~~h~~f  254 (325)
T cd05604         217 PGAS-LTAWSILEELLEKDRQRRLGAKEDFLEIQEHPFF  254 (325)
T ss_pred             CCCC-HHHHHHHHHHhccCHHhcCCCCCCHHHHhcCCCc
Confidence            2233 678899999999999999987    478888763

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels,

>cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2

Probab=100.00  E-value=8.4e-41  Score=307.91  Aligned_cols=253  Identities=19%  Similarity=0.194  Sum_probs=192.5

Q ss_pred             eeEEEEEEeeccCceEEEEEEecCCCCceEEEEecCCCCChH---HHHHHHHHhhhccccccccccceeeecccCeeEEE
Q 018699           48 KKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFPWE---FYMYRQLDQRISGRERSSFGFAHRIHLYSDYSILV  124 (351)
Q Consensus        48 ~~Y~i~~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~~~e---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv  124 (351)
                      ++|++.+.||+|+||+||+|. +..+++.||+|++.......   ...+......+....+++++.....+...+.+|+|
T Consensus         1 ~~f~~~~~lG~G~~g~V~~~~-~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~~~~~~lv   79 (360)
T cd05627           1 DDFESLKVIGRGAFGEVRLVQ-KKDTGHIYAMKILRKADMLEKEQVAHIRAERDILVEADGAWVVKMFYSFQDKRNLYLI   79 (360)
T ss_pred             CCceEEEEEeeCCCEEEEEEE-ECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEEE
Confidence            369999999999999999999 56788999999986432111   12222222333445667777777777788899999


Q ss_pred             EEecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeeccCCCCCcccC
Q 018699          125 CDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSGPWQDQ  204 (351)
Q Consensus       125 ~e~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~~~~~~~~~  204 (351)
                      |||++|++|.+++..    ...+++..++.++.|++.||.|||++||+||||||+||+++                 .++
T Consensus        80 ~E~~~gg~L~~~l~~----~~~l~~~~~~~~~~qi~~~L~~lH~~givHrDLkp~NIli~-----------------~~~  138 (360)
T cd05627          80 MEFLPGGDMMTLLMK----KDTLSEEATQFYIAETVLAIDAIHQLGFIHRDIKPDNLLLD-----------------AKG  138 (360)
T ss_pred             EeCCCCccHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHCCeEccCCCHHHEEEC-----------------CCC
Confidence            999999999999977    46799999999999999999999999999999999999998                 778


Q ss_pred             CeEEeecCCccccccCCC---------------------------------CccccccccCCCcccceeccCCCCCccch
Q 018699          205 GLCLVDWGRGIDLHLFPD---------------------------------NMEFEGDCRTSGFRCIEMQEKKPWKFQVD  251 (351)
Q Consensus       205 ~~~l~Dfg~a~~~~~~~~---------------------------------~~~~~~~~g~~~y~aPE~~~~~~~~~~~D  251 (351)
                      .++|+|||++........                                 .......+||+.|+|||++.+..++.++|
T Consensus       139 ~vkL~DfG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~D  218 (360)
T cd05627         139 HVKLSDFGLCTGLKKAHRTEFYRNLTHNPPSDFSFQNMNSKRKAETWKKNRRQLAYSTVGTPDYIAPEVFMQTGYNKLCD  218 (360)
T ss_pred             CEEEeeccCCcccccccccccccccccCCcccccccccccccccccccccccccccccCCCccccCHHHHcCCCCCCcce
Confidence            899999998754321100                                 00012346899999999999999999999


Q ss_pred             HhHHHHHHHHHHhCccccccccCCCCCceee--ecCcchhhh--hHHHHHHHHHHHHhcCCCCCChH---HHHHHHHHHH
Q 018699          252 TYGLCAIVHMMLHNSYMEIEKKASPDGGLVY--LPKLSFKRY--WKVELWKSLFTNLLNMSSGNDKE---VLQNLQKSFQ  324 (351)
Q Consensus       252 iwslG~il~~l~~g~~p~~~~~~~~~~~~~~--~~~~~~~~~--~~~~~~~~li~~~L~~dP~~R~s---~~e~l~~~~~  324 (351)
                      ||||||++|+|++|..||.............  .....++..  .+ +.+++||.+|+. ||.+|++   +.+++.|||.
T Consensus       219 iwSlGvilyel~tG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s-~~~~~li~~l~~-~p~~R~~~~~~~ei~~hp~f  296 (360)
T cd05627         219 WWSLGVIMYEMLIGYPPFCSETPQETYRKVMNWKETLVFPPEVPIS-EKAKDLILRFCT-DSENRIGSNGVEEIKSHPFF  296 (360)
T ss_pred             eccccceeeecccCCCCCCCCCHHHHHHHHHcCCCceecCCCCCCC-HHHHHHHHHhcc-ChhhcCCCCCHHHHhcCCCC
Confidence            9999999999999999997654321100000  111111111  23 788999999874 9999984   7899999873

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul

>cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2

Probab=100.00  E-value=2.2e-40  Score=305.56  Aligned_cols=257  Identities=18%  Similarity=0.244  Sum_probs=196.1

Q ss_pred             EEEcCeeEEEEEEeeccCceEEEEEEecCCCCceEEEEecCCCCC---hHHHHHHHHHhhhccccccccccceeeecccC
Q 018699           43 IEIGGKKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFP---WEFYMYRQLDQRISGRERSSFGFAHRIHLYSD  119 (351)
Q Consensus        43 ~~i~~~~Y~i~~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~~---~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  119 (351)
                      ..+..++|++.+.||+|+||.||+|+ +..+++.||+|++.+...   .....+...........|++++.....+..++
T Consensus        38 ~~~~~~~y~~~~~lG~G~fg~Vy~~~-~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~~~  116 (370)
T cd05621          38 LQMKAEDYDVVKVIGRGAFGEVQLVR-HKSSQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFCAFQDDK  116 (370)
T ss_pred             cCCCHHHCeEEEEEEecCCeEEEEEE-ECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEcCC
Confidence            34556899999999999999999999 567889999999864211   11122222333344567888888888888889


Q ss_pred             eeEEEEEecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeeccCCCC
Q 018699          120 YSILVCDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSG  199 (351)
Q Consensus       120 ~~~lv~e~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~~~~  199 (351)
                      ..|+||||+++|+|.+++..     ..+++..+..++.||+.||+|||++||+||||||+||+++               
T Consensus       117 ~~~lv~Ey~~gg~L~~~l~~-----~~~~~~~~~~~~~qil~aL~~LH~~~IvHrDLKp~NILl~---------------  176 (370)
T cd05621         117 YLYMVMEYMPGGDLVNLMSN-----YDVPEKWAKFYTAEVVLALDAIHSMGLIHRDVKPDNMLLD---------------  176 (370)
T ss_pred             EEEEEEcCCCCCcHHHHHHh-----cCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHEEEC---------------
Confidence            99999999999999999865     4688999999999999999999999999999999999999               


Q ss_pred             CcccCCeEEeecCCccccccCCCCccccccccCCCcccceeccCCC----CCccchHhHHHHHHHHHHhCccccccccCC
Q 018699          200 PWQDQGLCLVDWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQEKKP----WKFQVDTYGLCAIVHMMLHNSYMEIEKKAS  275 (351)
Q Consensus       200 ~~~~~~~~l~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~----~~~~~DiwslG~il~~l~~g~~p~~~~~~~  275 (351)
                        .++.++|+|||++...... .........||+.|+|||++.+..    ++.++|||||||++|+|++|..||......
T Consensus       177 --~~~~~kL~DFG~a~~~~~~-~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~~DiwSlG~ilyell~G~~Pf~~~~~~  253 (370)
T cd05621         177 --KHGHLKLADFGTCMKMDET-GMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVGDTPFYADSLV  253 (370)
T ss_pred             --CCCCEEEEecccceecccC-CceecccCCCCcccCCHHHHhccCCCCCCCcccCEEeehHHHHHHHhCCCCCCCCCHH
Confidence              7788999999998653211 111223557999999999986543    678999999999999999999999755422


Q ss_pred             CCCceeee--cCcchhh--hhHHHHHHHHHHHHhcCCCCC--ChHHHHHHHHHHH
Q 018699          276 PDGGLVYL--PKLSFKR--YWKVELWKSLFTNLLNMSSGN--DKEVLQNLQKSFQ  324 (351)
Q Consensus       276 ~~~~~~~~--~~~~~~~--~~~~~~~~~li~~~L~~dP~~--R~s~~e~l~~~~~  324 (351)
                      ........  ....++.  ..+ ..++++|.+||..+|.+  |+++.++++|||.
T Consensus       254 ~~~~~i~~~~~~~~~p~~~~~s-~~~~~li~~~L~~~~~r~~R~~~~e~l~hp~~  307 (370)
T cd05621         254 GTYSKIMDHKNSLNFPEDVEIS-KHAKNLICAFLTDREVRLGRNGVEEIKQHPFF  307 (370)
T ss_pred             HHHHHHHhCCcccCCCCcccCC-HHHHHHHHHHccCchhccCCCCHHHHhcCccc
Confidence            11000000  1111222  123 78899999999866654  8999999999874

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found

>cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=1.4e-40  Score=296.69  Aligned_cols=251  Identities=19%  Similarity=0.238  Sum_probs=194.6

Q ss_pred             eEEEEEEeeccCceEEEEEEecCCCCceEEEEecCCCCChH----HHHHHHHHhhhccccccccccceeeecccCeeEEE
Q 018699           49 KYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFPWE----FYMYRQLDQRISGRERSSFGFAHRIHLYSDYSILV  124 (351)
Q Consensus        49 ~Y~i~~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~~~e----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv  124 (351)
                      +|++.+.||+|+||+||+|. +..+++.||+|++.......    .....++ ..+....+++++.....+..++..++|
T Consensus         1 ~y~~~~~lg~G~~g~V~~~~-~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~-~~l~~l~h~~iv~~~~~~~~~~~~~lv   78 (285)
T cd05605           1 TFRHYRVLGKGGFGEVCACQ-VRATGKMYACKKLEKKRIKKRKGEAMALNEK-QILEKVNSRFVVSLAYAYETKDALCLV   78 (285)
T ss_pred             CceEEEEEecCCCeEEEEEE-EcCCCceEEEEEEehhhhhhhhhHHHHHHHH-HHHHhcCCCCEeeeeeeecCCCeEEEE
Confidence            48999999999999999999 56778999999986532211    1111121 223344567777777777778899999


Q ss_pred             EEecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeeccCCCCCcccC
Q 018699          125 CDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSGPWQDQ  204 (351)
Q Consensus       125 ~e~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~~~~~~~~~  204 (351)
                      |||+++++|.+++....  +..+++..+..++.|++.|+.|||+.|++|+||+|+||+++                 .++
T Consensus        79 ~e~~~~~~L~~~~~~~~--~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~~-----------------~~~  139 (285)
T cd05605          79 LTLMNGGDLKFHIYNMG--NPGFDEERAVFYAAEITCGLEDLHRERIVYRDLKPENILLD-----------------DYG  139 (285)
T ss_pred             EeccCCCcHHHHHHhcC--cCCCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCHHHEEEC-----------------CCC
Confidence            99999999998886532  34689999999999999999999999999999999999998                 677


Q ss_pred             CeEEeecCCccccccCCCCccccccccCCCcccceeccCCCCCccchHhHHHHHHHHHHhCccccccccCCCCC----ce
Q 018699          205 GLCLVDWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQEKKPWKFQVDTYGLCAIVHMMLHNSYMEIEKKASPDG----GL  280 (351)
Q Consensus       205 ~~~l~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~p~~~~~~~~~~----~~  280 (351)
                      .++|+|||++....   .........|++.|+|||++.+..++.++||||+||++|+|++|..||.........    ..
T Consensus       140 ~~~l~Dfg~~~~~~---~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~el~~g~~pf~~~~~~~~~~~~~~~  216 (285)
T cd05605         140 HIRISDLGLAVEIP---EGETIRGRVGTVGYMAPEVVKNERYTFSPDWWGLGCLIYEMIEGKSPFRQRKEKVKREEVERR  216 (285)
T ss_pred             CEEEeeCCCceecC---CCCccccccCCCCccCcHHhcCCCCCccccchhHHHHHHHHHHCCCCCCCCchhhHHHHHHHH
Confidence            89999999886432   222234457899999999998888999999999999999999999999754332100    00


Q ss_pred             eeecCcchhhhhHHHHHHHHHHHHhcCCCCCCh-----HHHHHHHHHHH
Q 018699          281 VYLPKLSFKRYWKVELWKSLFTNLLNMSSGNDK-----EVLQNLQKSFQ  324 (351)
Q Consensus       281 ~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~-----s~~e~l~~~~~  324 (351)
                      ........+...+ +.+.+||.+||+.||.+||     ++.+++.|+|.
T Consensus       217 ~~~~~~~~~~~~~-~~~~~li~~~l~~~P~~R~~~~~~~~~~l~~~~~~  264 (285)
T cd05605         217 VKEDQEEYSEKFS-EAARSICRQLLTKDPGFRLGCRGEGAEEVKAHPFF  264 (285)
T ss_pred             hhhcccccCcccC-HHHHHHHHHHccCCHHHhcCCCCCCHHHHhcCcCc
Confidence            1112222333344 7889999999999999999     89999999754

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5,

>cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5

Probab=100.00  E-value=5.1e-40  Score=290.21  Aligned_cols=253  Identities=19%  Similarity=0.193  Sum_probs=195.9

Q ss_pred             cCeeEEEEEEeeccCceEEEEEEecCCCCceEEEEecCCCCChHHHHHHHHHhhhccccccccccceeeecccCeeEEEE
Q 018699           46 GGKKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFPWEFYMYRQLDQRISGRERSSFGFAHRIHLYSDYSILVC  125 (351)
Q Consensus        46 ~~~~Y~i~~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~  125 (351)
                      ..++|++.+.||+|+||.||+|+ +..+++.||+|++......................|+++......+..++..++||
T Consensus         7 ~~~~y~~~~~lg~g~~g~vy~~~-~~~~~~~~aik~~~~~~~~~~~~~~~e~~~l~~~~h~~ii~~~~~~~~~~~~~iv~   85 (267)
T cd06646           7 PQHDYELIQRVGSGTYGDVYKAR-NLHTGELAAVKIIKLEPGDDFSLIQQEIFMVKECKHCNIVAYFGSYLSREKLWICM   85 (267)
T ss_pred             chhhcchhheeecCCCeEEEEEE-ECCCCeEEEEEEEecCccchHHHHHHHHHHHHhcCCCCeeeeeEEEEeCCEEEEEE
Confidence            35689999999999999999999 56778999999987544333333222233345556778888787777788999999


Q ss_pred             EecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeeccCCCCCcccCC
Q 018699          126 DYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSGPWQDQG  205 (351)
Q Consensus       126 e~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~~~~~~~~~~  205 (351)
                      ||+++++|.+++..    +..+++..+..++.|++.|+.|||+.||+|+|++|+||+++                 .++.
T Consensus        86 e~~~~~~L~~~~~~----~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nill~-----------------~~~~  144 (267)
T cd06646          86 EYCGGGSLQDIYHV----TGPLSELQIAYVCRETLQGLAYLHSKGKMHRDIKGANILLT-----------------DNGD  144 (267)
T ss_pred             eCCCCCcHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEEC-----------------CCCC
Confidence            99999999999876    46789999999999999999999999999999999999998                 6778


Q ss_pred             eEEeecCCccccccCCCCccccccccCCCcccceecc---CCCCCccchHhHHHHHHHHHHhCccccccccCCCCCceee
Q 018699          206 LCLVDWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQE---KKPWKFQVDTYGLCAIVHMMLHNSYMEIEKKASPDGGLVY  282 (351)
Q Consensus       206 ~~l~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~---~~~~~~~~DiwslG~il~~l~~g~~p~~~~~~~~~~~~~~  282 (351)
                      ++|+|||++.....  .........++..|+|||.+.   ...++.++|+||+||++|+|++|..||....+........
T Consensus       145 ~~l~dfg~~~~~~~--~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~~~Dvws~G~il~el~~g~~p~~~~~~~~~~~~~~  222 (267)
T cd06646         145 VKLADFGVAAKITA--TIAKRKSFIGTPYWMAPEVAAVEKNGGYNQLCDIWAVGITAIELAELQPPMFDLHPMRALFLMS  222 (267)
T ss_pred             EEECcCccceeecc--cccccCccccCccccCHhHcccccCCCCcchhhHHHHHHHHHHHHhCCCCccccchhhhheeee
Confidence            99999998865321  111223346788999999874   3456789999999999999999999986543321111110


Q ss_pred             -----ecCcchhhhhHHHHHHHHHHHHhcCCCCCChHHHHHHHHHH
Q 018699          283 -----LPKLSFKRYWKVELWKSLFTNLLNMSSGNDKEVLQNLQKSF  323 (351)
Q Consensus       283 -----~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~~~~  323 (351)
                           .+.......++ ..+.+||++||..||++||++.+++.|+|
T Consensus       223 ~~~~~~~~~~~~~~~~-~~~~~li~~~l~~~P~~Rp~~~~il~~l~  267 (267)
T cd06646         223 KSNFQPPKLKDKTKWS-STFHNFVKISLTKNPKKRPTAERLLTHLF  267 (267)
T ss_pred             cCCCCCCCCccccccC-HHHHHHHHHHhhCChhhCcCHHHHhcCCC
Confidence                 11111122344 78999999999999999999999998864

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated

>cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4

Probab=100.00  E-value=5.9e-40  Score=293.00  Aligned_cols=250  Identities=17%  Similarity=0.182  Sum_probs=186.2

Q ss_pred             eEEEEEEeeccCceEEEEEEecCCCCceEEEEecCCCCCh-----HHHHHHHHHhhhccccccccccceeeecc-----c
Q 018699           49 KYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFPW-----EFYMYRQLDQRISGRERSSFGFAHRIHLY-----S  118 (351)
Q Consensus        49 ~Y~i~~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~~~-----e~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~  118 (351)
                      +|++.+.||+|+||+||+|. +..+++.||+|.+......     .......+...+....|+++.....+...     .
T Consensus         1 ~y~~~~~lg~g~~g~v~~~~-~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~ni~~~~~~~~~~~~~~~   79 (288)
T cd07863           1 QYEPVAEIGVGAYGTVYKAR-DPHSGHFVALKSVRVQTNEDGLPLSTVREVALLKRLEAFDHPNIVRLMDVCATSRTDRE   79 (288)
T ss_pred             CceEeeEEeecCCeEEEEEE-ECCCCcEEEEEEeccCcCCCCCchHHHHHHHHHHHhhhcCCCCeeeeeeeeccccCCCC
Confidence            59999999999999999999 5678999999987643211     11111222233333457777776665432     3


Q ss_pred             CeeEEEEEecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeeccCCC
Q 018699          119 DYSILVCDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRS  198 (351)
Q Consensus       119 ~~~~lv~e~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~~~  198 (351)
                      ...++||||+. ++|.+++....  ...+++..++.++.|++.|+.|||++||+|+||||+||+++              
T Consensus        80 ~~~~lv~e~~~-~~l~~~~~~~~--~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dikp~Nili~--------------  142 (288)
T cd07863          80 TKVTLVFEHVD-QDLRTYLDKVP--PPGLPAETIKDLMRQFLRGLDFLHANCIVHRDLKPENILVT--------------  142 (288)
T ss_pred             ceEEEEEcccc-cCHHHHHHhcC--CCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEC--------------
Confidence            56799999995 58988887642  24589999999999999999999999999999999999998              


Q ss_pred             CCcccCCeEEeecCCccccccCCCCccccccccCCCcccceeccCCCCCccchHhHHHHHHHHHHhCccccccccCCCC-
Q 018699          199 GPWQDQGLCLVDWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQEKKPWKFQVDTYGLCAIVHMMLHNSYMEIEKKASPD-  277 (351)
Q Consensus       199 ~~~~~~~~~l~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~p~~~~~~~~~-  277 (351)
                         .++.++|+|||++.....   ........++..|+|||++.+..++.++||||+||++|+|++|.+||........ 
T Consensus       143 ---~~~~~kl~dfg~~~~~~~---~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~~f~~~~~~~~~  216 (288)
T cd07863         143 ---SGGQVKLADFGLARIYSC---QMALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQL  216 (288)
T ss_pred             ---CCCCEEECccCccccccC---cccCCCccccccccCchHhhCCCCCCcchhhhHHHHHHHHHhCCcCcCCCCHHHHH
Confidence               677899999998864321   1222344678899999999888899999999999999999999999854322100 


Q ss_pred             ------------Ccee---------e--ecCcc---hhhhhHHHHHHHHHHHHhcCCCCCChHHHHHHHHHH
Q 018699          278 ------------GGLV---------Y--LPKLS---FKRYWKVELWKSLFTNLLNMSSGNDKEVLQNLQKSF  323 (351)
Q Consensus       278 ------------~~~~---------~--~~~~~---~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~~~~  323 (351)
                                  ..+.         .  .....   .....+ +.+++||.+||.+||++||++.|++.|||
T Consensus       217 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~li~~~L~~dP~~R~t~~~~l~hp~  287 (288)
T cd07863         217 GKIFDLIGLPPEDDWPRDVTLPRGAFSPRGPRPVQSVVPEIE-ESGAQLLLEMLTFNPHKRISAFRALQHPF  287 (288)
T ss_pred             HHHHHHhCCCChhhCcccccccccccCCCCCCchHHhCcCcC-HHHHHHHHHHhccCcccCCCHHHHhcCCC
Confidence                        0000         0  00000   001122 67899999999999999999999999986

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou

>cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=1.5e-41  Score=309.30  Aligned_cols=244  Identities=20%  Similarity=0.222  Sum_probs=185.5

Q ss_pred             eeccCceEEEEEEecCCCCceEEEEecCCCCCh-HHHHHHHH-----HhhhccccccccccceeeecccCeeEEEEEecC
Q 018699           56 AGQGGFAKVFKAYVNGDPEDVVALKIQKPAFPW-EFYMYRQL-----DQRISGRERSSFGFAHRIHLYSDYSILVCDYLS  129 (351)
Q Consensus        56 lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~~~-e~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~  129 (351)
                      ||+|+||+||+|+ +..+++.||+|++.+.... +......+     ........+++++.....+...+..|+||||++
T Consensus         1 lG~G~~g~Vy~~~-~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~p~i~~~~~~~~~~~~~~lv~e~~~   79 (330)
T cd05586           1 IGKGTFGQVYQVR-KKDTRRIYAMKVLSKKEIVAKKEVAHTIGERNILVRTLLDESPFIVGLKFSFQTDSDLYLVTDYMS   79 (330)
T ss_pred             CCCCCceEEEEEE-ECCCCCEEEEEEEeHHHHhhhhHHHHHHHHHHHHHHhccCCCCcCcceEEEEecCCeEEEEEcCCC
Confidence            7999999999999 5778899999998643211 11111111     111122257788887777888889999999999


Q ss_pred             CCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeeccCCCCCcccCCeEEe
Q 018699          130 QGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSGPWQDQGLCLV  209 (351)
Q Consensus       130 ~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~~~~~~~~~~~~l~  209 (351)
                      +++|.+.+..    ...+++..++.++.||+.|++|||++||+||||||+||+++                 .++.++|+
T Consensus        80 ~g~L~~~l~~----~~~~~~~~~~~~~~qil~al~~LH~~~ivHrDlkp~Nili~-----------------~~~~~kl~  138 (330)
T cd05586          80 GGELFWHLQK----EGRFSEDRAKFYIAELVLALEHLHKYDIVYRDLKPENILLD-----------------ATGHIALC  138 (330)
T ss_pred             CChHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeEEC-----------------CCCCEEEe
Confidence            9999998876    46799999999999999999999999999999999999999                 67789999


Q ss_pred             ecCCccccccCCCCccccccccCCCcccceeccCC-CCCccchHhHHHHHHHHHHhCccccccccCCCCCceeeecCcch
Q 018699          210 DWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQEKK-PWKFQVDTYGLCAIVHMMLHNSYMEIEKKASPDGGLVYLPKLSF  288 (351)
Q Consensus       210 Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~-~~~~~~DiwslG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~  288 (351)
                      |||++....  .........+||+.|+|||++.+. .++.++|||||||++|+|++|..||..................+
T Consensus       139 Dfg~a~~~~--~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwslGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~  216 (330)
T cd05586         139 DFGLSKANL--TDNKTTNTFCGTTEYLAPEVLLDEKGYTKHVDFWSLGVLVFEMCCGWSPFYAEDTQQMYRNIAFGKVRF  216 (330)
T ss_pred             cCCcCcCCC--CCCCCccCccCCccccCHHHHcCCCCCCCccceeccccEEEEeccCCCCCCCCCHHHHHHHHHcCCCCC
Confidence            999886422  112223456789999999998654 57899999999999999999999997543221111111111122


Q ss_pred             hhh-hHHHHHHHHHHHHhcCCCCCCh----HHHHHHHHHHH
Q 018699          289 KRY-WKVELWKSLFTNLLNMSSGNDK----EVLQNLQKSFQ  324 (351)
Q Consensus       289 ~~~-~~~~~~~~li~~~L~~dP~~R~----s~~e~l~~~~~  324 (351)
                      +.. .+ +.+++||.+||++||.+||    ++.+++.|+|.
T Consensus       217 ~~~~~~-~~~~~li~~~L~~~P~~R~~~~~~~~~ll~h~~~  256 (330)
T cd05586         217 PKNVLS-DEGRQFVKGLLNRNPQHRLGAHRDAVELKEHPFF  256 (330)
T ss_pred             CCccCC-HHHHHHHHHHcCCCHHHCCCCCCCHHHHhcCccc
Confidence            221 23 7889999999999999998    68999999864

Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of

>KOG0594 consensus Protein kinase PCTAIRE and related kinases [General function prediction only]

Probab=100.00  E-value=8.9e-41  Score=288.52  Aligned_cols=256  Identities=21%  Similarity=0.213  Sum_probs=193.1

Q ss_pred             eeEEEEEEeeccCceEEEEEEecCCCCceEEEEecCCCCChH-----HHHHHHHHhhhccccccc-cccceeeecccC--
Q 018699           48 KKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFPWE-----FYMYRQLDQRISGRERSS-FGFAHRIHLYSD--  119 (351)
Q Consensus        48 ~~Y~i~~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~~~e-----~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~--  119 (351)
                      ..|+.+++||.|+||+||+|+ ...+|+.||+|++.-+...|     .-....+.+.+   .+.+ ++.++++....+  
T Consensus        11 ~~~~~~eklGeGtyg~Vykar-~~~~g~~VALKkirl~~~~EG~P~taiREisllk~L---~~~~~iv~L~dv~~~~~~~   86 (323)
T KOG0594|consen   11 FDYEKVEKLGEGTYGVVYKAR-SKRTGKFVALKKIRLEFEEEGVPSTAIREISLLKRL---SHANHIVRLHDVIHTSNNH   86 (323)
T ss_pred             HHHHHHHHhCCCCceEEEEEE-EecCCCEEEEEEEeccccccCCCchhhHHHHHHHHh---CCCcceEEEEeeeeecccc
Confidence            457888899999999999999 67889999999987554321     11112222222   2233 777777776555  


Q ss_pred             ----eeEEEEEecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeecc
Q 018699          120 ----YSILVCDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDH  195 (351)
Q Consensus       120 ----~~~lv~e~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~  195 (351)
                          .+++|+||+ ..+|..++......+..++...++.++.||+.|++|||+++|+||||||+||+++           
T Consensus        87 ~~~~~l~lvfe~~-d~DL~~ymd~~~~~~~g~~~~~ik~~m~Qll~gl~~~H~~~IlHRDLKPQNlLi~-----------  154 (323)
T KOG0594|consen   87 RGIGKLYLVFEFL-DRDLKKYMDSLPKKPQGLPPRLIKSFMRQLLRGLAFLHSHGILHRDLKPQNLLIS-----------  154 (323)
T ss_pred             cccceEEEEEEee-cccHHHHHHhccccccCCCHHHHHHHHHHHHHHHHHHHhCCeecccCCcceEEEC-----------
Confidence                889999999 7799999998631113577789999999999999999999999999999999999           


Q ss_pred             CCCCCcccCCeEEeecCCccccccCCCCccccccccCCCcccceeccCC-CCCccchHhHHHHHHHHHHhCccccccccC
Q 018699          196 DRSGPWQDQGLCLVDWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQEKK-PWKFQVDTYGLCAIVHMMLHNSYMEIEKKA  274 (351)
Q Consensus       196 ~~~~~~~~~~~~l~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~-~~~~~~DiwslG~il~~l~~g~~p~~~~~~  274 (351)
                            +.|.+||+|||+|+...  .+...+...++|..|.|||++.|. .|+...||||+|||++||+++.+.|.....
T Consensus       155 ------~~G~lKlaDFGlAra~~--ip~~~yt~evvTlWYRaPEvLlGs~~Ys~~vDiWs~GcIfaEm~~~~~LFpG~se  226 (323)
T KOG0594|consen  155 ------SSGVLKLADFGLARAFS--IPMRTYTPEVVTLWYRAPEVLLGSTSYSTSVDIWSLGCIFAEMFTRRPLFPGDSE  226 (323)
T ss_pred             ------CCCcEeeeccchHHHhc--CCcccccccEEEeeccCHHHhcCCCcCCCCcchHhHHHHHHHHHhCCCCCCCCcH
Confidence                  78999999999998433  234456777889999999999886 788999999999999999999987754433


Q ss_pred             CCC------------------------Cceeeec---CcchhhhhHH--HHHHHHHHHHhcCCCCCChHHHHHHHHHHHH
Q 018699          275 SPD------------------------GGLVYLP---KLSFKRYWKV--ELWKSLFTNLLNMSSGNDKEVLQNLQKSFQD  325 (351)
Q Consensus       275 ~~~------------------------~~~~~~~---~~~~~~~~~~--~~~~~li~~~L~~dP~~R~s~~e~l~~~~~~  325 (351)
                      ...                        ....+..   +..+......  ....+++.+||.++|.+|.|+..+|.|++..
T Consensus       227 ~~ql~~If~~lGtP~e~~Wp~v~~~~~~k~~f~~~~~~~~l~~~~~~~~~~~~dll~~~L~y~p~~R~Sa~~al~h~yf~  306 (323)
T KOG0594|consen  227 IDQLFRIFRLLGTPNEKDWPGVSSLPDYKAPFPKWPGPKDLSSILPKLDPDGIELLSKLLQYDPAKRISAKGALTHPYFS  306 (323)
T ss_pred             HHHHHHHHHHcCCCCccCCCCccccccccccCcCCCCccchHHhccccCccHHHHHHHHhccCcccCcCHHHHhcChhhc
Confidence            200                        1101100   1111111111  4788999999999999999999999998654


Q ss_pred             HH
Q 018699          326 YL  327 (351)
Q Consensus       326 ~~  327 (351)
                      -+
T Consensus       307 ~~  308 (323)
T KOG0594|consen  307 EL  308 (323)
T ss_pred             cc
Confidence            43

>cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3

Probab=100.00  E-value=8.7e-40  Score=300.67  Aligned_cols=251  Identities=20%  Similarity=0.267  Sum_probs=187.7

Q ss_pred             CeeEEEEEEeeccCceEEEEEEecCCCCceEEEEecCCCCChHH---HHHHHHHhhhccccccccccceeeeccc-----
Q 018699           47 GKKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFPWEF---YMYRQLDQRISGRERSSFGFAHRIHLYS-----  118 (351)
Q Consensus        47 ~~~Y~i~~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~~~e~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----  118 (351)
                      .++|++.+.||+|+||+||+|. +..+++.||+|++........   ...+++ .......|+++.....++...     
T Consensus        16 ~~~y~~~~~lg~G~~g~V~~~~-~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~-~~l~~l~h~niv~~~~~~~~~~~~~~   93 (355)
T cd07874          16 LKRYQNLKPIGSGAQGIVCAAY-DAVLDRNVAIKKLSRPFQNQTHAKRAYREL-VLMKCVNHKNIISLLNVFTPQKSLEE   93 (355)
T ss_pred             hhceeEEEEeeecCCEEEEEEE-ecCCCceEEEEEeCCcccChHHHHHHHHHH-HHHHHhCCCchhceeeeeeccccccc
Confidence            4789999999999999999999 577889999999876533222   111221 223344677777776655332     


Q ss_pred             -CeeEEEEEecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeeccCC
Q 018699          119 -DYSILVCDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDR  197 (351)
Q Consensus       119 -~~~~lv~e~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~~  197 (351)
                       ...|+||||+. ++|.+.+..      .+++..++.++.|++.||.|||++||+||||||+||+++             
T Consensus        94 ~~~~~lv~e~~~-~~l~~~~~~------~l~~~~~~~~~~qi~~aL~~LH~~givHrDikp~Nill~-------------  153 (355)
T cd07874          94 FQDVYLVMELMD-ANLCQVIQM------ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVK-------------  153 (355)
T ss_pred             cceeEEEhhhhc-ccHHHHHhh------cCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChHHEEEC-------------
Confidence             35799999994 577776643      478888999999999999999999999999999999998             


Q ss_pred             CCCcccCCeEEeecCCccccccCCCCccccccccCCCcccceeccCCCCCccchHhHHHHHHHHHHhCccccccccCCCC
Q 018699          198 SGPWQDQGLCLVDWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQEKKPWKFQVDTYGLCAIVHMMLHNSYMEIEKKASPD  277 (351)
Q Consensus       198 ~~~~~~~~~~l~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~p~~~~~~~~~  277 (351)
                          .++.++|+|||++.....   ........+++.|+|||++.+..++.++|||||||++|+|++|..||........
T Consensus       154 ----~~~~~kl~Dfg~~~~~~~---~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~  226 (355)
T cd07874         154 ----SDCTLKILDFGLARTAGT---SFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQ  226 (355)
T ss_pred             ----CCCCEEEeeCcccccCCC---ccccCCccccCCccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHH
Confidence                678899999999864321   2223445689999999999998899999999999999999999999864321000


Q ss_pred             ------------------------------Cc---ee---------eecCcchhhhhHHHHHHHHHHHHhcCCCCCChHH
Q 018699          278 ------------------------------GG---LV---------YLPKLSFKRYWKVELWKSLFTNLLNMSSGNDKEV  315 (351)
Q Consensus       278 ------------------------------~~---~~---------~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~  315 (351)
                                                    ..   ..         .......+...+ ..+++||.+||+.||.+|||+
T Consensus       227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~li~~mL~~dP~~Rps~  305 (355)
T cd07874         227 WNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKA-SQARDLLSKMLVIDPAKRISV  305 (355)
T ss_pred             HHHHHHHhCCCCHHHHHhhcHHHHHHHhcCCccccccchhhccccccccccccccccc-hHHHHHHHHHhcCCchhcCCH
Confidence                                          00   00         000000111112 568999999999999999999


Q ss_pred             HHHHHHHHHHHH
Q 018699          316 LQNLQKSFQDYL  327 (351)
Q Consensus       316 ~e~l~~~~~~~~  327 (351)
                      .|+|+|||...+
T Consensus       306 ~ell~hp~~~~~  317 (355)
T cd07874         306 DEALQHPYINVW  317 (355)
T ss_pred             HHHhcCcchhcc
Confidence            999999986644

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok

>cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1

Probab=100.00  E-value=1.4e-39  Score=300.21  Aligned_cols=250  Identities=21%  Similarity=0.279  Sum_probs=186.4

Q ss_pred             CeeEEEEEEeeccCceEEEEEEecCCCCceEEEEecCCCCChHH---HHHHHHHhhhccccccccccceeeecc------
Q 018699           47 GKKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFPWEF---YMYRQLDQRISGRERSSFGFAHRIHLY------  117 (351)
Q Consensus        47 ~~~Y~i~~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~~~e~---~~~~~~~~~~~~~~~~~~~~~~~~~~~------  117 (351)
                      .++|++.+.||+|+||.||+|+ +..+++.||||++........   ...+++ .......|+++.....++..      
T Consensus        23 ~~~y~~~~~lg~G~~g~V~~~~-~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~-~~l~~l~h~~ii~~~~~~~~~~~~~~  100 (364)
T cd07875          23 LKRYQNLKPIGSGAQGIVCAAY-DAILERNVAIKKLSRPFQNQTHAKRAYREL-VLMKCVNHKNIIGLLNVFTPQKSLEE  100 (364)
T ss_pred             hcceeEEEEeecCCCeEEEEEE-ECCCCcEEEEEEeCccccCchhHHHHHHHH-HHHHhcCCCCccccceeecccccccc
Confidence            4789999999999999999999 577889999999876432211   122222 22334456777666655432      


Q ss_pred             cCeeEEEEEecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeeccCC
Q 018699          118 SDYSILVCDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDR  197 (351)
Q Consensus       118 ~~~~~lv~e~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~~  197 (351)
                      ....|+||||+ +++|.+.+..      .+++..+..++.|++.||.|||++||+||||||+||+++             
T Consensus       101 ~~~~~lv~e~~-~~~l~~~~~~------~~~~~~~~~~~~qi~~aL~~LH~~~ivH~Dlkp~NIll~-------------  160 (364)
T cd07875         101 FQDVYIVMELM-DANLCQVIQM------ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVK-------------  160 (364)
T ss_pred             cCeEEEEEeCC-CCCHHHHHHh------cCCHHHHHHHHHHHHHHHHHHhhCCeecCCCCHHHEEEC-------------
Confidence            23579999999 5578777743      477888999999999999999999999999999999999             


Q ss_pred             CCCcccCCeEEeecCCccccccCCCCccccccccCCCcccceeccCCCCCccchHhHHHHHHHHHHhCccccccccCCCC
Q 018699          198 SGPWQDQGLCLVDWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQEKKPWKFQVDTYGLCAIVHMMLHNSYMEIEKKASPD  277 (351)
Q Consensus       198 ~~~~~~~~~~l~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~p~~~~~~~~~  277 (351)
                          .++.++|+|||++.....   ........+++.|+|||++.+..++.++|||||||++|+|++|..||...+....
T Consensus       161 ----~~~~~kL~DfG~a~~~~~---~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~  233 (364)
T cd07875         161 ----SDCTLKILDFGLARTAGT---SFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQ  233 (364)
T ss_pred             ----CCCcEEEEeCCCccccCC---CCcccCCcccCCcCCHHHHhCCCCCchhhHHhHHHHHHHHHhCCCCCCCCCHHHH
Confidence                778899999999864321   1222345689999999999999999999999999999999999999864321100


Q ss_pred             --------C-------------------------ce---------eeecCcchhhhhHHHHHHHHHHHHhcCCCCCChHH
Q 018699          278 --------G-------------------------GL---------VYLPKLSFKRYWKVELWKSLFTNLLNMSSGNDKEV  315 (351)
Q Consensus       278 --------~-------------------------~~---------~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~  315 (351)
                              +                         .+         ............+ ..+++||.+||..||.+|||+
T Consensus       234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~dll~~mL~~dP~~R~t~  312 (364)
T cd07875         234 WNKVIEQLGTPCPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKA-SQARDLLSKMLVIDASKRISV  312 (364)
T ss_pred             HHHHHHhcCCCCHHHHHhhhHHHHHHHhhCCCcCCCChHhhCcccccccccccccccc-HHHHHHHHHhcCcCcccCCCH
Confidence                    0                         00         0000000000011 578999999999999999999


Q ss_pred             HHHHHHHHHHH
Q 018699          316 LQNLQKSFQDY  326 (351)
Q Consensus       316 ~e~l~~~~~~~  326 (351)
                      .|+|+|||...
T Consensus       313 ~e~L~hp~~~~  323 (364)
T cd07875         313 DEALQHPYINV  323 (364)
T ss_pred             HHHhcCccccc
Confidence            99999987653

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn

>cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1

Probab=100.00  E-value=1e-39  Score=301.32  Aligned_cols=257  Identities=17%  Similarity=0.229  Sum_probs=194.5

Q ss_pred             EEEcCeeEEEEEEeeccCceEEEEEEecCCCCceEEEEecCCCCC---hHHHHHHHHHhhhccccccccccceeeecccC
Q 018699           43 IEIGGKKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFP---WEFYMYRQLDQRISGRERSSFGFAHRIHLYSD  119 (351)
Q Consensus        43 ~~i~~~~Y~i~~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~~---~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  119 (351)
                      ..+..++|++.+.||+|+||.||+|+ +..+++.||+|++.+...   .....+...........+++++.....+..++
T Consensus        38 ~~~~~~~y~i~~~lG~G~fg~Vy~~~-~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~~~  116 (371)
T cd05622          38 LRMKAEDYEVVKVIGRGAFGEVQLVR-HKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDDR  116 (371)
T ss_pred             cCcchhhcEEEEEEeecCCeEEEEEE-ECCCCcEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcCC
Confidence            45556899999999999999999999 577889999999864211   11122222233344556788888888888889


Q ss_pred             eeEEEEEecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeeccCCCC
Q 018699          120 YSILVCDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSG  199 (351)
Q Consensus       120 ~~~lv~e~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~~~~  199 (351)
                      ..|+||||+++++|.+++..     ..+++..+..++.||+.||.|||++||+||||||+||+++               
T Consensus       117 ~~~lv~Ey~~gg~L~~~~~~-----~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDLkp~NIll~---------------  176 (371)
T cd05622         117 YLYMVMEYMPGGDLVNLMSN-----YDVPEKWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLLD---------------  176 (371)
T ss_pred             EEEEEEcCCCCCcHHHHHHh-----cCCCHHHHHHHHHHHHHHHHHHHHCCEEeCCCCHHHEEEC---------------
Confidence            99999999999999999865     4588999999999999999999999999999999999999               


Q ss_pred             CcccCCeEEeecCCccccccCCCCccccccccCCCcccceeccCC----CCCccchHhHHHHHHHHHHhCccccccccCC
Q 018699          200 PWQDQGLCLVDWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQEKK----PWKFQVDTYGLCAIVHMMLHNSYMEIEKKAS  275 (351)
Q Consensus       200 ~~~~~~~~l~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~----~~~~~~DiwslG~il~~l~~g~~p~~~~~~~  275 (351)
                        .++.++|+|||++...... .........||+.|+|||++.+.    .++.++|||||||++|+|++|..||......
T Consensus       177 --~~~~ikL~DfG~a~~~~~~-~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~  253 (371)
T cd05622         177 --KSGHLKLADFGTCMKMNKE-GMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLV  253 (371)
T ss_pred             --CCCCEEEEeCCceeEcCcC-CcccccCcccCccccCHHHHhccCCCccCCCccceeehhHHHHHHHhCCCCCCCCCHH
Confidence              7788999999998654311 11122345789999999998653    2778999999999999999999999754432


Q ss_pred             CCCceee--ecCcchhh--hhHHHHHHHHHHHHhcCCCCC--ChHHHHHHHHHHH
Q 018699          276 PDGGLVY--LPKLSFKR--YWKVELWKSLFTNLLNMSSGN--DKEVLQNLQKSFQ  324 (351)
Q Consensus       276 ~~~~~~~--~~~~~~~~--~~~~~~~~~li~~~L~~dP~~--R~s~~e~l~~~~~  324 (351)
                      .....+.  .....++.  ..+ ..++++|.+||..++.+  |+++.++++|+|.
T Consensus       254 ~~~~~i~~~~~~~~~~~~~~~s-~~~~~li~~~L~~~~~r~~r~~~~ei~~h~~~  307 (371)
T cd05622         254 GTYSKIMNHKNSLTFPDDNDIS-KEAKNLICAFLTDREVRLGRNGVEEIKRHLFF  307 (371)
T ss_pred             HHHHHHHcCCCcccCCCcCCCC-HHHHHHHHHHcCChhhhcCCCCHHHHhcCccc
Confidence            1101000  01111121  233 78999999999854443  7899999999863

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an

>cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1

Probab=100.00  E-value=1.8e-39  Score=291.11  Aligned_cols=257  Identities=21%  Similarity=0.216  Sum_probs=200.7

Q ss_pred             CeeEEEEEEeeccCceEEEEEEecCCCCceEEEEecCCCCChHHHHHHHHHhhhccccccccccceeeecccCeeEEEEE
Q 018699           47 GKKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFPWEFYMYRQLDQRISGRERSSFGFAHRIHLYSDYSILVCD  126 (351)
Q Consensus        47 ~~~Y~i~~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e  126 (351)
                      ..+|++.+.||+|++|.||+|+ +..+++.|++|.+......................|+++......+..+...|+|||
T Consensus        19 ~~~y~~~~~lg~g~~~~v~~~~-~~~~~~~v~ik~~~~~~~~~~~~~~~e~~~l~~~~h~~v~~~~~~~~~~~~~~lv~e   97 (296)
T cd06654          19 KKKYTRFEKIGQGASGTVYTAM-DVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVME   97 (296)
T ss_pred             ccceeeEEEecCCCCeEEEEEE-ECCCCcEEEEEEEecCCcchHHHHHHHHHHHHhCCCCCEeeEEEEEEeCCEEEEeec
Confidence            3689999999999999999999 567789999998876544333333332333445567888888877777889999999


Q ss_pred             ecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeeccCCCCCcccCCe
Q 018699          127 YLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSGPWQDQGL  206 (351)
Q Consensus       127 ~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~~~~~~~~~~~  206 (351)
                      |+++++|.+++..     ..+++..+..++.|++.|+.|||+.||+|+||+|+||+++                 .++.+
T Consensus        98 ~~~~~~L~~~~~~-----~~~~~~~~~~i~~ql~~aL~~LH~~gi~H~dLkp~Nill~-----------------~~~~~  155 (296)
T cd06654          98 YLAGGSLTDVVTE-----TCMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLG-----------------MDGSV  155 (296)
T ss_pred             ccCCCCHHHHHHh-----cCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEc-----------------CCCCE
Confidence            9999999999864     4678889999999999999999999999999999999998                 66789


Q ss_pred             EEeecCCccccccCCCCccccccccCCCcccceeccCCCCCccchHhHHHHHHHHHHhCccccccccCCCCCcee---ee
Q 018699          207 CLVDWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQEKKPWKFQVDTYGLCAIVHMMLHNSYMEIEKKASPDGGLV---YL  283 (351)
Q Consensus       207 ~l~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~p~~~~~~~~~~~~~---~~  283 (351)
                      +|+|||.+....  ..........+++.|+|||.+.+..++.++||||+||++|+|++|..||....+.......   ..
T Consensus       156 kl~dfg~~~~~~--~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~~l~~g~~pf~~~~~~~~~~~~~~~~~  233 (296)
T cd06654         156 KLTDFGFCAQIT--PEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGT  233 (296)
T ss_pred             EECccccchhcc--ccccccCcccCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCCCCCHHHhHHHHhcCCC
Confidence            999999876432  1122223446788999999998888899999999999999999999999765432110000   01


Q ss_pred             cCcchhhhhHHHHHHHHHHHHhcCCCCCChHHHHHHHHHHHHHHhh
Q 018699          284 PKLSFKRYWKVELWKSLFTNLLNMSSGNDKEVLQNLQKSFQDYLCS  329 (351)
Q Consensus       284 ~~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~~~~~~~~~~  329 (351)
                      +....+.... ..+.++|.+||.+||++||++.+++.|+|......
T Consensus       234 ~~~~~~~~~~-~~l~~li~~~l~~~p~~Rpt~~eil~~~~~~~~~~  278 (296)
T cd06654         234 PELQNPEKLS-AIFRDFLNRCLDMDVEKRGSAKELLQHQFLKIAKP  278 (296)
T ss_pred             CCCCCccccC-HHHHHHHHHHCcCCcccCcCHHHHhhChhhhccCC
Confidence            1112222233 77899999999999999999999999988654433

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity

Probab=100.00  E-value=2.5e-40  Score=290.76  Aligned_cols=250  Identities=22%  Similarity=0.287  Sum_probs=196.4

Q ss_pred             EEEEEEeeccCceEEEEEEecCCCCceEEEEecCCCCChHHHHHH--HHHhhhccccccccccceeeecccCeeEEEEEe
Q 018699           50 YQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFPWEFYMYR--QLDQRISGRERSSFGFAHRIHLYSDYSILVCDY  127 (351)
Q Consensus        50 Y~i~~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~~~e~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~  127 (351)
                      |++++.||+|+||+||+|+ +..+++.||+|++............  ..........++++.....+.......++|||+
T Consensus         1 y~~~~~lg~G~~g~v~~~~-~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~~v~~~   79 (260)
T PF00069_consen    1 YRLVKKLGSGGFGTVYKAK-NKKNGQKVAVKIIDKSEIEEEEREENIREIKILRRLRHPNIVQILDVFQDDNYLYIVMEY   79 (260)
T ss_dssp             EEEEEEEEEESSEEEEEEE-ETTTTEEEEEEEEESTTHHHHHHHHHHHHHHHHHHHTBTTBCHEEEEEEESSEEEEEEEE
T ss_pred             CEEeEEEEeCCCEEEEEEE-ECCCCeEEEEEEeccccccccccchhhhhhhccccccccccccccccccccccccccccc
Confidence            8999999999999999999 5778889999999877544333211  111222333678888888888889999999999


Q ss_pred             cCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeeccCCCCCcccCCeE
Q 018699          128 LSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSGPWQDQGLC  207 (351)
Q Consensus       128 ~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~~~~~~~~~~~~  207 (351)
                      +.+++|.+++..    ...+++..++.++.|++.||.+||++|++|+||+|+||+++                 .++.++
T Consensus        80 ~~~~~L~~~l~~----~~~~~~~~~~~~~~qi~~~L~~Lh~~~i~H~dikp~NIl~~-----------------~~~~~~  138 (260)
T PF00069_consen   80 CPGGSLQDYLQK----NKPLSEEEILKIAYQILEALAYLHSKGIVHRDIKPENILLD-----------------ENGEVK  138 (260)
T ss_dssp             ETTEBHHHHHHH----HSSBBHHHHHHHHHHHHHHHHHHHHTTEEESSBSGGGEEES-----------------TTSEEE
T ss_pred             cccccccccccc----ccccccccccccccccccccccccccccccccccccccccc-----------------cccccc
Confidence            988899999984    47899999999999999999999999999999999999999                 677799


Q ss_pred             EeecCCccccccCCCCccccccccCCCcccceecc-CCCCCccchHhHHHHHHHHHHhCccccccccCCCC-CceeeecC
Q 018699          208 LVDWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQE-KKPWKFQVDTYGLCAIVHMMLHNSYMEIEKKASPD-GGLVYLPK  285 (351)
Q Consensus       208 l~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~-~~~~~~~~DiwslG~il~~l~~g~~p~~~~~~~~~-~~~~~~~~  285 (351)
                      |+|||.+...  ...........++..|+|||++. +..++.++||||||+++|+|++|..||........ ........
T Consensus       139 l~Dfg~~~~~--~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~p~~~~~~~~~~~~~~~~~~  216 (260)
T PF00069_consen  139 LIDFGSSVKL--SENNENFNPFVGTPEYMAPEVLQQGKKYTRKSDIWSLGIILYELLTGKLPFEESNSDDQLEIIEKILK  216 (260)
T ss_dssp             ESSGTTTEES--TSTTSEBSSSSSSGGGSCHHHHTTTSSBSTHHHHHHHHHHHHHHHHSSSSSTTSSHHHHHHHHHHHHH
T ss_pred             cccccccccc--cccccccccccccccccccccccccccccccccccccccccccccccccccccccchhhhhhhhhccc
Confidence            9999998643  12233445567899999999998 78889999999999999999999999886511100 00000000


Q ss_pred             cchhhhh--H---HHHHHHHHHHHhcCCCCCChHHHHHHHHHH
Q 018699          286 LSFKRYW--K---VELWKSLFTNLLNMSSGNDKEVLQNLQKSF  323 (351)
Q Consensus       286 ~~~~~~~--~---~~~~~~li~~~L~~dP~~R~s~~e~l~~~~  323 (351)
                      ...+..+  .   ...+.++|.+||+.||++||++.++++|||
T Consensus       217 ~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~R~~~~~l~~~~~  259 (260)
T PF00069_consen  217 RPLPSSSQQSREKSEELRDLIKKMLSKDPEQRPSAEELLKHPW  259 (260)
T ss_dssp             THHHHHTTSHTTSHHHHHHHHHHHSSSSGGGSTTHHHHHTSGG
T ss_pred             ccccccccccchhHHHHHHHHHHHccCChhHCcCHHHHhcCCC
Confidence            0111110  0   168999999999999999999999999987

Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A ....

>cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase

Probab=100.00  E-value=1.3e-39  Score=293.89  Aligned_cols=253  Identities=19%  Similarity=0.220  Sum_probs=191.2

Q ss_pred             eeEEEEEEeeccCceEEEEEEecCCCCceEEEEecCCCCCh--HHHHHHHHHhhhccccccccccceeeecccCeeEEEE
Q 018699           48 KKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFPW--EFYMYRQLDQRISGRERSSFGFAHRIHLYSDYSILVC  125 (351)
Q Consensus        48 ~~Y~i~~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~~~--e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~  125 (351)
                      ++|++.+.||+|+||+||+|+ +..+++.||+|.+......  .....+++ .......|++++....+...++..++||
T Consensus         6 ~~y~~~~~lg~G~~g~Vy~~~-~~~~~~~vaiK~~~~~~~~~~~~~~~~E~-~~l~~l~h~~iv~~~~~~~~~~~~~lv~   83 (309)
T cd07872           6 ETYIKLEKLGEGTYATVFKGR-SKLTENLVALKEIRLEHEEGAPCTAIREV-SLLKDLKHANIVTLHDIVHTDKSLTLVF   83 (309)
T ss_pred             CceEEEEEecccCCEEEEEEE-ecCCCCeEEEEEeeccccCCcchhHHHHH-HHHHhCCCCCcceEEEEEeeCCeEEEEE
Confidence            679999999999999999999 5677899999987643221  11122222 2334456788888888888888999999


Q ss_pred             EecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeeccCCCCCcccCC
Q 018699          126 DYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSGPWQDQG  205 (351)
Q Consensus       126 e~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~~~~~~~~~~  205 (351)
                      ||++ ++|.+++...   +..++...++.++.|++.|+.|||++||+||||+|+||+++                 .++.
T Consensus        84 e~~~-~~l~~~~~~~---~~~~~~~~~~~~~~qi~~aL~~lH~~~ivH~dlkp~Nill~-----------------~~~~  142 (309)
T cd07872          84 EYLD-KDLKQYMDDC---GNIMSMHNVKIFLYQILRGLAYCHRRKVLHRDLKPQNLLIN-----------------ERGE  142 (309)
T ss_pred             eCCC-CCHHHHHHhc---CCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEC-----------------CCCC
Confidence            9995 5888887654   45688999999999999999999999999999999999999                 6778


Q ss_pred             eEEeecCCccccccCCCCccccccccCCCcccceeccC-CCCCccchHhHHHHHHHHHHhCccccccccCCCCC------
Q 018699          206 LCLVDWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQEK-KPWKFQVDTYGLCAIVHMMLHNSYMEIEKKASPDG------  278 (351)
Q Consensus       206 ~~l~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~~DiwslG~il~~l~~g~~p~~~~~~~~~~------  278 (351)
                      ++|+|||++.....  .........+++.|+|||.+.+ ..++.++|||||||++|+|++|..||...+.....      
T Consensus       143 ~kl~Dfg~~~~~~~--~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~~  220 (309)
T cd07872         143 LKLADFGLARAKSV--PTKTYSNEVVTLWYRPPDVLLGSSEYSTQIDMWGVGCIFFEMASGRPLFPGSTVEDELHLIFRL  220 (309)
T ss_pred             EEECccccceecCC--CccccccccccccccCCHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHH
Confidence            99999998864321  1222334467889999998865 56789999999999999999999998654321000      


Q ss_pred             -------------------ceeeecCc-----chhhhhHHHHHHHHHHHHhcCCCCCChHHHHHHHHHHHHH
Q 018699          279 -------------------GLVYLPKL-----SFKRYWKVELWKSLFTNLLNMSSGNDKEVLQNLQKSFQDY  326 (351)
Q Consensus       279 -------------------~~~~~~~~-----~~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~~~~~~~  326 (351)
                                         ........     ......+ +.+++||.+||..||.+|||+.|++.|+|...
T Consensus       221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~li~~~L~~dp~~R~t~~e~l~h~~~~~  291 (309)
T cd07872         221 LGTPTEETWPGISSNDEFKNYNFPKYKPQPLINHAPRLD-TEGIELLTKFLQYESKKRISAEEAMKHAYFRS  291 (309)
T ss_pred             hCCCCHHHHhhhcchhhhhhhhcCccCCCchhhhccCCC-HHHHHHHHHhccCChhhCCCHHHHhcChhhhh
Confidence                               00000000     0001123 67899999999999999999999999987553

Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play

>cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=4.5e-40  Score=299.58  Aligned_cols=254  Identities=20%  Similarity=0.251  Sum_probs=191.8

Q ss_pred             eeEEEEEEeeccCceEEEEEEecCCCCceEEEEecCCCCC---hHHHHHHHHHhhhccccccccccceeeecccCeeEEE
Q 018699           48 KKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFP---WEFYMYRQLDQRISGRERSSFGFAHRIHLYSDYSILV  124 (351)
Q Consensus        48 ~~Y~i~~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~~---~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv  124 (351)
                      ++|++.+.||+|+||+||+|+ ...+++.||+|++.+...   .+...+...........++++......+..++..|+|
T Consensus         1 ~~y~~~~~lG~G~~g~V~~~~-~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv   79 (331)
T cd05597           1 DDFEILKVIGRGAFGEVAVVK-MKNTGQVYAMKILNKWEMLKRAETACFREERDVLVNGDRRWITNLHYAFQDENNLYLV   79 (331)
T ss_pred             CCceEEEEEEecCCeEEEEEE-ECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCceEEEEecCCeEEEE
Confidence            479999999999999999999 567789999999864211   1222233333344455778888888888888999999


Q ss_pred             EEecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeeccCCCCCcccC
Q 018699          125 CDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSGPWQDQ  204 (351)
Q Consensus       125 ~e~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~~~~~~~~~  204 (351)
                      |||+++++|.+++...   +..+++..+..++.||+.|++|||++||+||||||+||+++                 .++
T Consensus        80 ~e~~~g~~L~~~l~~~---~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nill~-----------------~~~  139 (331)
T cd05597          80 MDYYVGGDLLTLLSKF---EDRLPEDMARFYLAEMVLAIDSVHQLGYVHRDIKPDNVLLD-----------------KNG  139 (331)
T ss_pred             EecCCCCcHHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHhCCeEECCCCHHHEEEC-----------------CCC
Confidence            9999999999999764   46789999999999999999999999999999999999998                 678


Q ss_pred             CeEEeecCCccccccCCCCccccccccCCCcccceeccC-----CCCCccchHhHHHHHHHHHHhCccccccccCCCCCc
Q 018699          205 GLCLVDWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQEK-----KPWKFQVDTYGLCAIVHMMLHNSYMEIEKKASPDGG  279 (351)
Q Consensus       205 ~~~l~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~-----~~~~~~~DiwslG~il~~l~~g~~p~~~~~~~~~~~  279 (351)
                      .++|+|||++....... ........||+.|+|||++.+     ..++.++||||+||++|+|++|..||..........
T Consensus       140 ~~kl~Dfg~~~~~~~~~-~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~~~~~~~~~  218 (331)
T cd05597         140 HIRLADFGSCLRLLADG-TVQSNVAVGTPDYISPEILQAMEDGKGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYG  218 (331)
T ss_pred             CEEEEECCceeecCCCC-CccccceeccccccCHHHHhhccccccCCCCcceeehhhhHHHHHhhCCCCCCCCCHHHHHH
Confidence            89999999886432111 111222468999999999863     456789999999999999999999997543211000


Q ss_pred             eee--ecCcchh---hhhHHHHHHHHHHHHhcCCCCC--ChHHHHHHHHHHH
Q 018699          280 LVY--LPKLSFK---RYWKVELWKSLFTNLLNMSSGN--DKEVLQNLQKSFQ  324 (351)
Q Consensus       280 ~~~--~~~~~~~---~~~~~~~~~~li~~~L~~dP~~--R~s~~e~l~~~~~  324 (351)
                      ...  ......+   ...+ +.+++||.+||..++++  |+++.+++.|+|.
T Consensus       219 ~i~~~~~~~~~~~~~~~~~-~~~~~li~~ll~~~~~r~~r~~~~~~l~hp~~  269 (331)
T cd05597         219 KIMNHKEHFQFPPDVTDVS-EEAKDLIRRLICSPETRLGRNGLQDFKDHPFF  269 (331)
T ss_pred             HHHcCCCcccCCCccCCCC-HHHHHHHHHHccCcccccCCCCHHHHhcCCCC
Confidence            000  0001111   1133 78999999999765544  7899999999873

Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy,

>KOG0193 consensus Serine/threonine protein kinase RAF [Signal transduction mechanisms]

Probab=100.00  E-value=5.3e-40  Score=298.94  Aligned_cols=268  Identities=15%  Similarity=0.173  Sum_probs=208.4

Q ss_pred             ceEEEEcCeeEEEEEEeeccCceEEEEEEecCCCCceEEEEecCCCCChHH--HHHHHHHhhhccccccccccceeeecc
Q 018699           40 NKTIEIGGKKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFPWEF--YMYRQLDQRISGRERSSFGFAHRIHLY  117 (351)
Q Consensus        40 ~~~~~i~~~~Y~i~~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~~~e~--~~~~~~~~~~~~~~~~~~~~~~~~~~~  117 (351)
                      ...++|.-+...+...||+|.||+||+|+|.    ..||||++.-+.....  +.++.....+.+..|.|+..+.++...
T Consensus       384 ~~~WeIp~~ev~l~~rIGsGsFGtV~Rg~wh----GdVAVK~Lnv~~pt~~qlqaFKnEVa~lkkTRH~NIlLFMG~~~~  459 (678)
T KOG0193|consen  384 LEEWEIPPEEVLLGERIGSGSFGTVYRGRWH----GDVAVKLLNVDDPTPEQLQAFKNEVAVLKKTRHENILLFMGACMN  459 (678)
T ss_pred             ccccccCHHHhhccceeccccccceeecccc----cceEEEEEecCCCCHHHHHHHHHHHHHHhhcchhhheeeehhhcC
Confidence            4577888889999999999999999999995    3499999876654432  223333344555667788877777776


Q ss_pred             cCeeEEEEEecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeeccCC
Q 018699          118 SDYSILVCDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDR  197 (351)
Q Consensus       118 ~~~~~lv~e~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~~  197 (351)
                      ++. .+|+.+|+|-+|+.++...   ...|...+.+.|+.||+.|+.|||.++|+|+|||..|||+.             
T Consensus       460 p~~-AIiTqwCeGsSLY~hlHv~---etkfdm~~~idIAqQiaqGM~YLHAK~IIHrDLKSnNIFl~-------------  522 (678)
T KOG0193|consen  460 PPL-AIITQWCEGSSLYTHLHVQ---ETKFDMNTTIDIAQQIAQGMDYLHAKNIIHRDLKSNNIFLH-------------  522 (678)
T ss_pred             Cce-eeeehhccCchhhhhccch---hhhhhHHHHHHHHHHHHHhhhhhhhhhhhhhhccccceEEc-------------
Confidence            666 9999999999999999765   25788899999999999999999999999999999999999             


Q ss_pred             CCCcccCCeEEeecCCccccccCCCCccccccccCCCcccceecc---CCCCCccchHhHHHHHHHHHHhCccccccccC
Q 018699          198 SGPWQDQGLCLVDWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQE---KKPWKFQVDTYGLCAIVHMMLHNSYMEIEKKA  274 (351)
Q Consensus       198 ~~~~~~~~~~l~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~---~~~~~~~~DiwslG~il~~l~~g~~p~~~~~~  274 (351)
                          +++.|||+|||++.........+......|...|||||++.   ..+|++.+||||+|+++|||++|..||.....
T Consensus       523 ----~~~kVkIgDFGLatvk~~w~g~~q~~qp~gsilwmAPEvIRmqd~nPfS~qSDVYaFGiV~YELltg~lPysi~~~  598 (678)
T KOG0193|consen  523 ----EDLKVKIGDFGLATVKTRWSGEQQLEQPHGSLLWMAPEVIRMQDDNPFSFQSDVYAFGIVWYELLTGELPYSIQNR  598 (678)
T ss_pred             ----cCCcEEEecccceeeeeeeccccccCCCccchhhhcHHHHhhcccCCCCcccchhhhhHHHHHHHhCcCCcCCCCh
Confidence                77889999999997766666666667777889999999984   45789999999999999999999999994433


Q ss_pred             CCCCceeeecC------cchhhhhHHHHHHHHHHHHhcCCCCCChHHHHHHHHHHHHHHhhChHHHH
Q 018699          275 SPDGGLVYLPK------LSFKRYWKVELWKSLFTNLLNMSSGNDKEVLQNLQKSFQDYLCSNPQLLK  335 (351)
Q Consensus       275 ~~~~~~~~~~~------~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~~~~~~~~~~~~~~~~  335 (351)
                      . ...+...-.      ........ +.+++|+..||.+++++||...++|... ++.+...|++.+
T Consensus       599 d-qIifmVGrG~l~pd~s~~~s~~p-k~mk~Ll~~C~~~~~~eRP~F~~il~~l-~~l~~~~pki~R  662 (678)
T KOG0193|consen  599 D-QIIFMVGRGYLMPDLSKIRSNCP-KAMKRLLSDCWKFDREERPLFPQLLSKL-EELLPSLPKINR  662 (678)
T ss_pred             h-heEEEecccccCccchhhhccCH-HHHHHHHHHHHhcCcccCccHHHHHHHH-HHhhhccccccc
Confidence            2 222221111      11111222 6899999999999999999999998742 333333444433

>cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase

Probab=100.00  E-value=5.1e-41  Score=304.23  Aligned_cols=247  Identities=21%  Similarity=0.243  Sum_probs=192.0

Q ss_pred             EEeeccCceEEEEEEe--cCCCCceEEEEecCCCCChHH--HHHHHHHhhhccccccccccceeeecccCeeEEEEEecC
Q 018699           54 GCAGQGGFAKVFKAYV--NGDPEDVVALKIQKPAFPWEF--YMYRQLDQRISGRERSSFGFAHRIHLYSDYSILVCDYLS  129 (351)
Q Consensus        54 ~~lg~G~~g~V~~a~~--~~~~~~~vaiK~~~~~~~~e~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~  129 (351)
                      +.||+|+||.||++++  ...+|+.||+|++........  .........+....|++++.....+..++..|+||||++
T Consensus         2 ~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~   81 (318)
T cd05582           2 KVLGQGSFGKVFLVRKITGPDAGQLYAMKVLKKATLKVRDRVRTKMERDILAEVNHPFIVKLHYAFQTEGKLYLILDFLR   81 (318)
T ss_pred             ceeeeCCCEEEEEEEEeccCCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhCCCCCcccEEEEEEcCCEEEEEEcCCC
Confidence            6799999999999985  235789999999875322111  111111223445568888888888888899999999999


Q ss_pred             CCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeeccCCCCCcccCCeEEe
Q 018699          130 QGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSGPWQDQGLCLV  209 (351)
Q Consensus       130 ~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~~~~~~~~~~~~l~  209 (351)
                      +++|.+++..    +..+++..++.++.||+.||+|||++||+||||+|+||+++                 .++.++|+
T Consensus        82 ~~~L~~~l~~----~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~-----------------~~~~~kL~  140 (318)
T cd05582          82 GGDLFTRLSK----EVMFTEEDVKFYLAELALALDHLHSLGIIYRDLKPENILLD-----------------EEGHIKLT  140 (318)
T ss_pred             CCcHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHeEEC-----------------CCCcEEEe
Confidence            9999999876    46799999999999999999999999999999999999998                 67789999


Q ss_pred             ecCCccccccCCCCccccccccCCCcccceeccCCCCCccchHhHHHHHHHHHHhCccccccccCCCCCceeeecCcchh
Q 018699          210 DWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQEKKPWKFQVDTYGLCAIVHMMLHNSYMEIEKKASPDGGLVYLPKLSFK  289 (351)
Q Consensus       210 Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~  289 (351)
                      |||++.....  .........|++.|+|||.+.+..++.++|||||||++|+|++|..||..................++
T Consensus       141 Dfg~~~~~~~--~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~~~i~~~~~~~p  218 (318)
T cd05582         141 DFGLSKESID--HEKKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGSLPFQGKDRKETMTMILKAKLGMP  218 (318)
T ss_pred             eccCCcccCC--CCCceecccCChhhcCHHHHcCCCCCCccceeccceEeeeeccCCCCCCCCCHHHHHHHHHcCCCCCC
Confidence            9998864321  11223345789999999999988889999999999999999999999975443211111112223344


Q ss_pred             hhhHHHHHHHHHHHHhcCCCCCChH-----HHHHHHHHHH
Q 018699          290 RYWKVELWKSLFTNLLNMSSGNDKE-----VLQNLQKSFQ  324 (351)
Q Consensus       290 ~~~~~~~~~~li~~~L~~dP~~R~s-----~~e~l~~~~~  324 (351)
                      ...+ +.+.+||.+||++||.+||+     ..+++.|+|.
T Consensus       219 ~~~~-~~~~~li~~~l~~~P~~R~~a~~~~~~~~~~~~~~  257 (318)
T cd05582         219 QFLS-PEAQSLLRALFKRNPANRLGAGPDGVEEIKRHPFF  257 (318)
T ss_pred             CCCC-HHHHHHHHHHhhcCHhHcCCCCCCCHHHHhCCCCc
Confidence            4444 78999999999999999999     6778888763

Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate

>KOG0579 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=4.2e-41  Score=306.84  Aligned_cols=266  Identities=19%  Similarity=0.229  Sum_probs=215.7

Q ss_pred             eeEEEEEEeeccCceEEEEEEecCCCCceEEEEecCCCCChHHHHHHHHHhhhccccccccccceeeecccCeeEEEEEe
Q 018699           48 KKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFPWEFYMYRQLDQRISGRERSSFGFAHRIHLYSDYSILVCDY  127 (351)
Q Consensus        48 ~~Y~i~~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~  127 (351)
                      +-|+|+..||.|+||.||+|. +..++-..|-|++......|.+-+.-....+....||+++.+..-+.+.+.++++.||
T Consensus        32 d~WeIiGELGDGAFGKVyKA~-nket~~lAAaKvIetkseEELEDylVEIeILa~CdHP~ivkLl~ayy~enkLwiliEF  110 (1187)
T KOG0579|consen   32 DHWEIIGELGDGAFGKVYKAV-NKETKLLAAAKVIETKSEEELEDYLVEIEILAECDHPVIVKLLSAYYFENKLWILIEF  110 (1187)
T ss_pred             HHHHHHhhhcCccchhhhhhh-cccchhhhhhhhhcccchhHHhhhhhhhhhhhcCCChHHHHHHHHHhccCceEEEEee
Confidence            568899999999999999999 5688888888887654433332222222334445678888888878889999999999


Q ss_pred             cCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeeccCCCCCcccCCeE
Q 018699          128 LSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSGPWQDQGLC  207 (351)
Q Consensus       128 ~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~~~~~~~~~~~~  207 (351)
                      |.||.....+-..   +..+++.++..+++|++.||.|||++.|+|||||..||++.                 .+|.++
T Consensus       111 C~GGAVDaimlEL---~r~LtE~QIqvvc~q~ldALn~LHs~~iIHRDLKAGNiL~T-----------------ldGdir  170 (1187)
T KOG0579|consen  111 CGGGAVDAIMLEL---GRVLTEDQIQVVCYQVLDALNWLHSQNIIHRDLKAGNILLT-----------------LDGDIR  170 (1187)
T ss_pred             cCCchHhHHHHHh---ccccchHHHHHHHHHHHHHHHHHhhcchhhhhccccceEEE-----------------ecCcEe
Confidence            9999999888776   78999999999999999999999999999999999999999                 778899


Q ss_pred             EeecCCccccccCCCCccccccccCCCcccceec-----cCCCCCccchHhHHHHHHHHHHhCccccccccCCC---CCc
Q 018699          208 LVDWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQ-----EKKPWKFQVDTYGLCAIVHMMLHNSYMEIEKKASP---DGG  279 (351)
Q Consensus       208 l~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~-----~~~~~~~~~DiwslG~il~~l~~g~~p~~~~~~~~---~~~  279 (351)
                      |+|||.+....  .......+++|||+|||||++     ...+|+.++||||||+++.+|..+.+|....++..   ...
T Consensus       171 LADFGVSAKn~--~t~qkRDsFIGTPYWMAPEVvmCET~KD~PYDykaDiWSlGITLIEMAqiEPPHhelnpMRVllKia  248 (1187)
T KOG0579|consen  171 LADFGVSAKNK--STRQKRDSFIGTPYWMAPEVVMCETFKDQPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVLLKIA  248 (1187)
T ss_pred             eecccccccch--hHHhhhccccCCcccccchheeeccccCCCchhhhhHHhhhhHHHHHhccCCCccccchHHHHHHHh
Confidence            99999875422  123345678899999999986     45789999999999999999999999987655431   122


Q ss_pred             eeeecCcchhhhhHHHHHHHHHHHHhcCCCCCChHHHHHHHHHHHHHHhhChHHHHHH
Q 018699          280 LVYLPKLSFKRYWKVELWKSLFTNLLNMSSGNDKEVLQNLQKSFQDYLCSNPQLLKNL  337 (351)
Q Consensus       280 ~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~~~~~~~~~~~~~~~~~~  337 (351)
                      ...+|....|..|+ ..+.||+++||.+||..||+++|+|.|||....-++.-+..-+
T Consensus       249 KSePPTLlqPS~Ws-~~F~DfLk~cL~Knp~~Rp~aaqll~Hpfv~~~~SnK~ireLl  305 (1187)
T KOG0579|consen  249 KSEPPTLLQPSHWS-RSFSDFLKRCLVKNPRNRPPAAQLLKHPFVQNAPSNKMIRELL  305 (1187)
T ss_pred             hcCCCcccCcchhh-hHHHHHHHHHHhcCCccCCCHHHHhhCcccccCCcchHHHHHH
Confidence            23456667788999 8999999999999999999999999999987666664333333

>PLN00034 mitogen-activated protein kinase kinase; Provisional

Probab=100.00  E-value=6.2e-40  Score=301.34  Aligned_cols=251  Identities=14%  Similarity=0.102  Sum_probs=189.9

Q ss_pred             cCeeEEEEEEeeccCceEEEEEEecCCCCceEEEEecCCCCChH-HHHHHHHHhhhccccccccccceeeecccCeeEEE
Q 018699           46 GGKKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFPWE-FYMYRQLDQRISGRERSSFGFAHRIHLYSDYSILV  124 (351)
Q Consensus        46 ~~~~Y~i~~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~~~e-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv  124 (351)
                      ...+|++.+.||.|+||+||+|+ +..+++.||||++....... ...+...........|++++....++...+.+++|
T Consensus        72 ~~~~~~~~~~lg~G~~g~V~~~~-~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv  150 (353)
T PLN00034         72 SLSELERVNRIGSGAGGTVYKVI-HRPTGRLYALKVIYGNHEDTVRRQICREIEILRDVNHPNVVKCHDMFDHNGEIQVL  150 (353)
T ss_pred             CHHHHhhhhhccCCCCeEEEEEE-ECCCCCEEEEEEEecCCcHHHHHHHHHHHHHHHhCCCCCcceeeeEeccCCeEEEE
Confidence            35789999999999999999999 56778999999986543221 11222222334455678888888888888899999


Q ss_pred             EEecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeeccCCCCCcccC
Q 018699          125 CDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSGPWQDQ  204 (351)
Q Consensus       125 ~e~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~~~~~~~~~  204 (351)
                      |||+.+++|...        ...++..+..++.||+.||.|||++||+||||||+||+++                 .++
T Consensus       151 ~e~~~~~~L~~~--------~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~-----------------~~~  205 (353)
T PLN00034        151 LEFMDGGSLEGT--------HIADEQFLADVARQILSGIAYLHRRHIVHRDIKPSNLLIN-----------------SAK  205 (353)
T ss_pred             EecCCCCccccc--------ccCCHHHHHHHHHHHHHHHHHHHHCCEeecCCCHHHEEEc-----------------CCC
Confidence            999999998642        3456777889999999999999999999999999999999                 677


Q ss_pred             CeEEeecCCccccccCCCCccccccccCCCcccceeccC-----CCCCccchHhHHHHHHHHHHhCccccccccCCCCCc
Q 018699          205 GLCLVDWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQEK-----KPWKFQVDTYGLCAIVHMMLHNSYMEIEKKASPDGG  279 (351)
Q Consensus       205 ~~~l~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~-----~~~~~~~DiwslG~il~~l~~g~~p~~~~~~~~~~~  279 (351)
                      .++|+|||++......  ........|+..|+|||.+..     ...+.++|||||||++|+|++|..||..........
T Consensus       206 ~~kL~DfG~~~~~~~~--~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~  283 (353)
T PLN00034        206 NVKIADFGVSRILAQT--MDPCNSSVGTIAYMSPERINTDLNHGAYDGYAGDIWSLGVSILEFYLGRFPFGVGRQGDWAS  283 (353)
T ss_pred             CEEEcccccceecccc--cccccccccCccccCccccccccccCcCCCcchhHHHHHHHHHHHHhCCCCCCCCCCccHHH
Confidence            8999999998653311  112234578999999998743     233468999999999999999999997432211000


Q ss_pred             ----eeeecCcchhhhhHHHHHHHHHHHHhcCCCCCChHHHHHHHHHHHH
Q 018699          280 ----LVYLPKLSFKRYWKVELWKSLFTNLLNMSSGNDKEVLQNLQKSFQD  325 (351)
Q Consensus       280 ----~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~~~~~~  325 (351)
                          .........+...+ ..+++||.+||..||++||++.|+++|+|..
T Consensus       284 ~~~~~~~~~~~~~~~~~~-~~l~~li~~~l~~~P~~Rpt~~ell~hp~~~  332 (353)
T PLN00034        284 LMCAICMSQPPEAPATAS-REFRHFISCCLQREPAKRWSAMQLLQHPFIL  332 (353)
T ss_pred             HHHHHhccCCCCCCCccC-HHHHHHHHHHccCChhhCcCHHHHhcCcccc
Confidence                00111222233334 7899999999999999999999999998744

>cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6

Probab=100.00  E-value=1.1e-39  Score=290.93  Aligned_cols=252  Identities=18%  Similarity=0.210  Sum_probs=193.2

Q ss_pred             eEEEEEEeeccCceEEEEEEecCCCCceEEEEecCCCCChHH----HHHHHHHhhhccccccccccceeeecccCeeEEE
Q 018699           49 KYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFPWEF----YMYRQLDQRISGRERSSFGFAHRIHLYSDYSILV  124 (351)
Q Consensus        49 ~Y~i~~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~~~e~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv  124 (351)
                      +|++.+.||+|+||+||+|. +..+++.||+|.+.+......    ....++ .......++++..........+..++|
T Consensus         1 ~f~~~~~ig~G~~g~v~~~~-~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~-~il~~l~~~~i~~~~~~~~~~~~~~lv   78 (285)
T cd05630           1 TFRQYRVLGKGGFGEVCACQ-VRATGKMYACKKLEKKRIKKRKGESMALNEK-QILEKVNSRFVVSLAYAYETKDALCLV   78 (285)
T ss_pred             CceeeEEeecCCCeEEEEEE-EcCCCceEEEEEEehhhccchHHHHHHHHHH-HHHHhCCCCCeeeeeEEEecCCEEEEE
Confidence            47889999999999999999 567889999998765422111    111121 223344566777666666777889999


Q ss_pred             EEecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeeccCCCCCcccC
Q 018699          125 CDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSGPWQDQ  204 (351)
Q Consensus       125 ~e~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~~~~~~~~~  204 (351)
                      |||+++++|.+++....  ...+++..+..++.|++.|+.|||+.||+|+||+|+||+++                 .++
T Consensus        79 ~e~~~g~~L~~~l~~~~--~~~l~~~~~~~~~~qi~~~l~~lH~~~iiH~dikp~Nil~~-----------------~~~  139 (285)
T cd05630          79 LTLMNGGDLKFHIYHMG--EAGFEEGRAVFYAAEICCGLEDLHQERIVYRDLKPENILLD-----------------DHG  139 (285)
T ss_pred             EEecCCCcHHHHHHHhc--ccCCCHHHHHHHHHHHHHHHHHHHhCCEEeCCCCHHHEEEC-----------------CCC
Confidence            99999999999886532  34689999999999999999999999999999999999999                 677


Q ss_pred             CeEEeecCCccccccCCCCccccccccCCCcccceeccCCCCCccchHhHHHHHHHHHHhCccccccccCCCC----Cce
Q 018699          205 GLCLVDWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQEKKPWKFQVDTYGLCAIVHMMLHNSYMEIEKKASPD----GGL  280 (351)
Q Consensus       205 ~~~l~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~p~~~~~~~~~----~~~  280 (351)
                      .++|+|||++....   .........|+..|+|||.+.+..++.++||||+||++|+|++|..||........    ...
T Consensus       140 ~~~l~Dfg~~~~~~---~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~Pf~~~~~~~~~~~~~~~  216 (285)
T cd05630         140 HIRISDLGLAVHVP---EGQTIKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVERL  216 (285)
T ss_pred             CEEEeeccceeecC---CCccccCCCCCccccChHHHcCCCCCCccccHHHHHHHHHHHhCCCCCCCCCccchHHHHHhh
Confidence            89999999885432   22223345789999999999988899999999999999999999999975432110    000


Q ss_pred             eeecCcchhhhhHHHHHHHHHHHHhcCCCCCChH-----HHHHHHHHHHH
Q 018699          281 VYLPKLSFKRYWKVELWKSLFTNLLNMSSGNDKE-----VLQNLQKSFQD  325 (351)
Q Consensus       281 ~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~s-----~~e~l~~~~~~  325 (351)
                      ........+...+ +.+++||.+||+.||.+||+     +.|++.|+|..
T Consensus       217 ~~~~~~~~~~~~~-~~~~~li~~~l~~~p~~R~s~~~~~~~~~~~h~~~~  265 (285)
T cd05630         217 VKEVQEEYSEKFS-PDARSLCKMLLCKDPKERLGCQGGGAREVKEHPLFK  265 (285)
T ss_pred             hhhhhhhcCccCC-HHHHHHHHHHhhcCHHHccCCCCCchHHHHcChhhh
Confidence            0111112233344 77899999999999999999     89999998753

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as

>PHA03207 serine/threonine kinase US3; Provisional

Probab=100.00  E-value=2.8e-39  Score=300.82  Aligned_cols=249  Identities=16%  Similarity=0.151  Sum_probs=192.5

Q ss_pred             cCeeEEEEEEeeccCceEEEEEEec-CCCCceEEEEecCCCCC--hHHHHHHHHHhhhccccccccccceeeecccCeeE
Q 018699           46 GGKKYQIKGCAGQGGFAKVFKAYVN-GDPEDVVALKIQKPAFP--WEFYMYRQLDQRISGRERSSFGFAHRIHLYSDYSI  122 (351)
Q Consensus        46 ~~~~Y~i~~~lg~G~~g~V~~a~~~-~~~~~~vaiK~~~~~~~--~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  122 (351)
                      ...+|++.+.||.|+||.||+|... ...++.||+|.+.....  .|...+       ....|++++.....+......|
T Consensus        90 ~~~~y~i~~~Lg~G~~g~Vy~~~~~~~~~~~~v~vK~~~~~~~~~~E~~il-------~~l~h~~iv~~~~~~~~~~~~~  162 (392)
T PHA03207         90 VRMQYNILSSLTPGSEGEVFVCTKHGDEQRKKVIVKAVTGGKTPGREIDIL-------KTISHRAIINLIHAYRWKSTVC  162 (392)
T ss_pred             ccCceEEEEeecCCCCeEEEEEEEcCCccceeEEEEeccccccHHHHHHHH-------HhcCCCCccceeeeEeeCCEEE
Confidence            3568999999999999999999742 34568899998875422  222222       2345677888777777788999


Q ss_pred             EEEEecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeeccCCCCCcc
Q 018699          123 LVCDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSGPWQ  202 (351)
Q Consensus       123 lv~e~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~~~~~~~  202 (351)
                      +|||++ +++|.+++..    ...+++..++.++.||+.||.|||++||+||||||+||+++                 .
T Consensus       163 lv~e~~-~~~l~~~l~~----~~~l~~~~~~~i~~ql~~aL~~LH~~givHrDlkp~Nill~-----------------~  220 (392)
T PHA03207        163 MVMPKY-KCDLFTYVDR----SGPLPLEQAITIQRRLLEALAYLHGRGIIHRDVKTENIFLD-----------------E  220 (392)
T ss_pred             EEehhc-CCCHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEEc-----------------C
Confidence            999999 5789888854    46899999999999999999999999999999999999999                 6


Q ss_pred             cCCeEEeecCCccccccCCCCccccccccCCCcccceeccCCCCCccchHhHHHHHHHHHHhCccccccccCCCC-----
Q 018699          203 DQGLCLVDWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQEKKPWKFQVDTYGLCAIVHMMLHNSYMEIEKKASPD-----  277 (351)
Q Consensus       203 ~~~~~l~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~p~~~~~~~~~-----  277 (351)
                      ++.++|+|||++................||+.|+|||++.+..++.++|||||||++|+|++|..||........     
T Consensus       221 ~~~~~l~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~l~  300 (392)
T PHA03207        221 PENAVLGDFGAACKLDAHPDTPQCYGWSGTLETNSPELLALDPYCAKTDIWSAGLVLFEMSVKNVTLFGKQVKSSSSQLR  300 (392)
T ss_pred             CCCEEEccCccccccCcccccccccccccccCccCHhHhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCCCCcHHHHH
Confidence            778999999998654332222223356789999999999998999999999999999999999999865432100     


Q ss_pred             ----------Cc---------------e--eeecCcchhhh-----hHHHHHHHHHHHHhcCCCCCChHHHHHHHHHHH
Q 018699          278 ----------GG---------------L--VYLPKLSFKRY-----WKVELWKSLFTNLLNMSSGNDKEVLQNLQKSFQ  324 (351)
Q Consensus       278 ----------~~---------------~--~~~~~~~~~~~-----~~~~~~~~li~~~L~~dP~~R~s~~e~l~~~~~  324 (351)
                                ..               +  ...+....+..     ++ ..+.+||.+||..||++||++.++|.|||.
T Consensus       301 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~li~~ml~~dp~~Rpsa~e~l~~p~f  378 (392)
T PHA03207        301 SIIRCMQVHPLEFPQNGSTNLCKHFKQYAIVLRPPYTIPPVIRKYGMH-MDVEYLIAKMLTFDQEFRPSAQDILSLPLF  378 (392)
T ss_pred             HHHHHhccCccccCCccchhHHHHHHhhcccccCCccccchhhccCcc-hhHHHHHHHHhccChhhCCCHHHHhhCchh
Confidence                      00               0  00111111111     12 578899999999999999999999999864

>cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3

Probab=100.00  E-value=4.3e-39  Score=288.83  Aligned_cols=255  Identities=20%  Similarity=0.206  Sum_probs=200.9

Q ss_pred             CeeEEEEEEeeccCceEEEEEEecCCCCceEEEEecCCCCChHHHHHHHHHhhhccccccccccceeeecccCeeEEEEE
Q 018699           47 GKKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFPWEFYMYRQLDQRISGRERSSFGFAHRIHLYSDYSILVCD  126 (351)
Q Consensus        47 ~~~Y~i~~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e  126 (351)
                      .++|++.+.||+|++|.||+|. +..+++.||+|.+........+.............|+++......+..++..|+|||
T Consensus        18 ~~~y~~~~~lg~g~~g~v~~~~-~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e   96 (297)
T cd06656          18 KKKYTRFEKIGQGASGTVYTAI-DIATGQEVAIKQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVME   96 (297)
T ss_pred             hhhceeeeeeccCCCeEEEEEE-ECCCCCEEEEEEEecCccchHHHHHHHHHHHHhCCCCCEeeEEEEEecCCEEEEeec
Confidence            3789999999999999999999 567789999999875443333333322334455677888888888888889999999


Q ss_pred             ecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeeccCCCCCcccCCe
Q 018699          127 YLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSGPWQDQGL  206 (351)
Q Consensus       127 ~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~~~~~~~~~~~  206 (351)
                      |+++++|.+++..     ..+++..+..++.|++.|+.|||+.|++|+||+|+||+++                 .++.+
T Consensus        97 ~~~~~~L~~~~~~-----~~~~~~~~~~~~~~l~~~L~~LH~~~i~H~dL~p~Nili~-----------------~~~~~  154 (297)
T cd06656          97 YLAGGSLTDVVTE-----TCMDEGQIAAVCRECLQALDFLHSNQVIHRDIKSDNILLG-----------------MDGSV  154 (297)
T ss_pred             ccCCCCHHHHHHh-----CCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEC-----------------CCCCE
Confidence            9999999999865     4678899999999999999999999999999999999998                 67789


Q ss_pred             EEeecCCccccccCCCCccccccccCCCcccceeccCCCCCccchHhHHHHHHHHHHhCccccccccCCCCCceee---e
Q 018699          207 CLVDWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQEKKPWKFQVDTYGLCAIVHMMLHNSYMEIEKKASPDGGLVY---L  283 (351)
Q Consensus       207 ~l~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~p~~~~~~~~~~~~~~---~  283 (351)
                      +|+|||.+.....  .........+++.|+|||.+.+..++.++|+||+||++|++++|..||.............   .
T Consensus       155 ~l~Dfg~~~~~~~--~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slGvil~~l~tg~~pf~~~~~~~~~~~~~~~~~  232 (297)
T cd06656         155 KLTDFGFCAQITP--EQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLIATNGT  232 (297)
T ss_pred             EECcCccceEccC--CccCcCcccCCccccCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcchheeeeccCCC
Confidence            9999998864321  1222234467889999999988888999999999999999999999997654431111111   1


Q ss_pred             cCcchhhhhHHHHHHHHHHHHhcCCCCCChHHHHHHHHHHHHHH
Q 018699          284 PKLSFKRYWKVELWKSLFTNLLNMSSGNDKEVLQNLQKSFQDYL  327 (351)
Q Consensus       284 ~~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~~~~~~~~  327 (351)
                      +....+...+ ..+++||.+||..+|++||++.+++.|+|....
T Consensus       233 ~~~~~~~~~~-~~~~~li~~~l~~~p~~Rps~~~il~~~~~~~~  275 (297)
T cd06656         233 PELQNPERLS-AVFRDFLNRCLEMDVDRRGSAKELLQHPFLKLA  275 (297)
T ss_pred             CCCCCccccC-HHHHHHHHHHccCChhhCcCHHHHhcCchhccc
Confidence            1112233333 778999999999999999999999999875433

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase

Probab=100.00  E-value=2.8e-39  Score=289.35  Aligned_cols=261  Identities=19%  Similarity=0.219  Sum_probs=201.7

Q ss_pred             CeeEEEEEEeeccCceEEEEEEecCCCCceEEEEecCCCCChHHHHHHHHHhhhccccccccccceeeecccCeeEEEEE
Q 018699           47 GKKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFPWEFYMYRQLDQRISGRERSSFGFAHRIHLYSDYSILVCD  126 (351)
Q Consensus        47 ~~~Y~i~~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e  126 (351)
                      ++.|++.+.||+|++|.||+|+ +..+++.|++|.+......+...+......+....|+++......+..++..++|||
T Consensus        11 ~~~y~i~~~lg~g~~g~vy~~~-~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e   89 (292)
T cd06644          11 NEVWEIIGELGDGAFGKVYKAK-NKETGALAAAKVIETKSEEELEDYMVEIEILATCNHPYIVKLLGAFYWDGKLWIMIE   89 (292)
T ss_pred             chhhhhhheecCCCCeEEEEEE-ECCCCceEEEEEeccCCHHHHHHHHHHHHHHHhCCCCcEeeeEEEEEeCCeEEEEEe
Confidence            5789999999999999999999 567789999999876544333333333334455677888888888778889999999


Q ss_pred             ecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeeccCCCCCcccCCe
Q 018699          127 YLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSGPWQDQGL  206 (351)
Q Consensus       127 ~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~~~~~~~~~~~  206 (351)
                      |+++++|..++...   ...+++..+..++.|++.++.+||++|++|+||+|+||+++                 .++.+
T Consensus        90 ~~~~~~l~~~~~~~---~~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~dlkp~Nili~-----------------~~~~~  149 (292)
T cd06644          90 FCPGGAVDAIMLEL---DRGLTEPQIQVICRQMLEALQYLHSMKIIHRDLKAGNVLLT-----------------LDGDI  149 (292)
T ss_pred             cCCCCcHHHHHHhh---cCCCCHHHHHHHHHHHHHHHHHHhcCCeeecCCCcceEEEc-----------------CCCCE
Confidence            99999998887654   45789999999999999999999999999999999999998                 67789


Q ss_pred             EEeecCCccccccCCCCccccccccCCCcccceecc-----CCCCCccchHhHHHHHHHHHHhCccccccccCCCCC-ce
Q 018699          207 CLVDWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQE-----KKPWKFQVDTYGLCAIVHMMLHNSYMEIEKKASPDG-GL  280 (351)
Q Consensus       207 ~l~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~-----~~~~~~~~DiwslG~il~~l~~g~~p~~~~~~~~~~-~~  280 (351)
                      +|+|||.+.....  .........+++.|+|||.+.     ...++.++|+|||||++|+|++|..||......... ..
T Consensus       150 kl~dfg~~~~~~~--~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~  227 (292)
T cd06644         150 KLADFGVSAKNVK--TLQRRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVLLKI  227 (292)
T ss_pred             EEccCccceeccc--cccccceecCCccccCceeeccccccCCCCCchhhhHhHHHHHHHHhcCCCCCccccHHHHHHHH
Confidence            9999998754221  112223445788999999984     345678999999999999999999998654322100 00


Q ss_pred             --eeecCcchhhhhHHHHHHHHHHHHhcCCCCCChHHHHHHHHHHHHHHhhCh
Q 018699          281 --VYLPKLSFKRYWKVELWKSLFTNLLNMSSGNDKEVLQNLQKSFQDYLCSNP  331 (351)
Q Consensus       281 --~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~~~~~~~~~~~~  331 (351)
                        ...+....+..++ ..+.++|.+||..||++||++.+++.|+|......++
T Consensus       228 ~~~~~~~~~~~~~~~-~~~~~li~~~l~~~p~~Rp~~~~il~~~~~~~~~~~~  279 (292)
T cd06644         228 AKSEPPTLSQPSKWS-MEFRDFLKTALDKHPETRPSAAQLLEHPFVSSVTSNR  279 (292)
T ss_pred             hcCCCccCCCCcccC-HHHHHHHHHHhcCCcccCcCHHHHhcCccccccccch
Confidence              0011122233344 6789999999999999999999999999866555555

Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types.

>cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=2.4e-39  Score=285.17  Aligned_cols=253  Identities=16%  Similarity=0.128  Sum_probs=197.2

Q ss_pred             eeEEEEEEeeccCceEEEEEEecCCCCceEEEEecCCCCCh-----HHHHHHHHHhhhccccccccccceeeecccCeeE
Q 018699           48 KKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFPW-----EFYMYRQLDQRISGRERSSFGFAHRIHLYSDYSI  122 (351)
Q Consensus        48 ~~Y~i~~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~~~-----e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  122 (351)
                      +.|++.+.||.|++|.||.|. +..+++.||+|.+......     +...+...........++++.....+....+..+
T Consensus         2 ~~~~~~~~lg~g~~~~vy~~~-~~~~~~~~~lk~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~   80 (263)
T cd06625           2 TNWRRGKLLGQGAFGRVYLCY-DVDTGRELAVKQVPFDPDSPETKKEVNALECEIQLLKNLQHERIVQYYGCLRDDETLS   80 (263)
T ss_pred             CcccccceecCCCceEEEEEE-EcCCCcEEEEEEEeecccchhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEccCCeEE
Confidence            369999999999999999999 5677899999987644221     1112222223445567888888888888888999


Q ss_pred             EEEEecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeeccCCCCCcc
Q 018699          123 LVCDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSGPWQ  202 (351)
Q Consensus       123 lv~e~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~~~~~~~  202 (351)
                      +|+||+++++|.+++..    ...+++..+..++.|++.|+.+||+.|++|+||+|+||+++                 .
T Consensus        81 ~v~e~~~~~~l~~~~~~----~~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dl~p~nilv~-----------------~  139 (263)
T cd06625          81 IFMEYMPGGSVKDQLKA----YGALTETVTRKYTRQILEGVEYLHSNMIVHRDIKGANILRD-----------------S  139 (263)
T ss_pred             EEEEECCCCcHHHHHHH----hCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEc-----------------C
Confidence            99999999999999887    36789999999999999999999999999999999999998                 6


Q ss_pred             cCCeEEeecCCccccccCCCC-ccccccccCCCcccceeccCCCCCccchHhHHHHHHHHHHhCccccccccCCCCCc--
Q 018699          203 DQGLCLVDWGRGIDLHLFPDN-MEFEGDCRTSGFRCIEMQEKKPWKFQVDTYGLCAIVHMMLHNSYMEIEKKASPDGG--  279 (351)
Q Consensus       203 ~~~~~l~Dfg~a~~~~~~~~~-~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~p~~~~~~~~~~~--  279 (351)
                      ++.++|+|||.+......... .......++..|+|||.+.+..++.++||||||+++|++++|..||..........  
T Consensus       140 ~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~  219 (263)
T cd06625         140 AGNVKLGDFGASKRLQTICSSGTGMKSVTGTPYWMSPEVISGEGYGRKADVWSVGCTVVEMLTEKPPWAEFEAMAAIFKI  219 (263)
T ss_pred             CCCEEEeecccceeccccccccccccCCCcCccccCcceeccCCCCchhhhHHHHHHHHHHHhCCCCccccchHHHHHHH
Confidence            778999999988643221111 11123457789999999998888999999999999999999999987543321000  


Q ss_pred             eeeecCcchhhhhHHHHHHHHHHHHhcCCCCCChHHHHHHHHHH
Q 018699          280 LVYLPKLSFKRYWKVELWKSLFTNLLNMSSGNDKEVLQNLQKSF  323 (351)
Q Consensus       280 ~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~~~~  323 (351)
                      .........+...+ ..+.++|.+||..+|++||++.+++.|+|
T Consensus       220 ~~~~~~~~~~~~~~-~~~~~li~~~l~~~p~~Rpt~~~ll~~~~  262 (263)
T cd06625         220 ATQPTNPQLPSHVS-PDARNFLRRTFVENAKKRPSAEELLRHFF  262 (263)
T ss_pred             hccCCCCCCCccCC-HHHHHHHHHHhhcCcccCCCHHHHhhCCC
Confidence            00112223333444 78899999999999999999999999976

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t

>cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3

Probab=100.00  E-value=5.1e-40  Score=290.21  Aligned_cols=253  Identities=19%  Similarity=0.192  Sum_probs=197.1

Q ss_pred             cCeeEEEEEEeeccCceEEEEEEecCCCCceEEEEecCCCCChHHHHHHHHHhhhccccccccccceeeecccCeeEEEE
Q 018699           46 GGKKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFPWEFYMYRQLDQRISGRERSSFGFAHRIHLYSDYSILVC  125 (351)
Q Consensus        46 ~~~~Y~i~~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~  125 (351)
                      ..++|++.+.||+|++|.||+|+ +..+++.||+|++......+...............++++..........+..++||
T Consensus         7 ~~~~~~~~~~lg~g~~~~v~~~~-~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~~~~l~h~~ii~~~~~~~~~~~~~lv~   85 (267)
T cd06645           7 PQEDFELIQRIGSGTYGDVYKAR-NVNTGELAAIKVIKLEPGEDFAVVQQEIIMMKDCKHSNIVAYFGSYLRRDKLWICM   85 (267)
T ss_pred             cHHHHHHHHHhCCCCCeEEEEEE-EcCCCcEEEEEEEecCchhHHHHHHHHHHHHHhCCCCCeeeEEEEEEeCCEEEEEE
Confidence            34689999999999999999999 56778999999987654443333333333444557788888888888889999999


Q ss_pred             EecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeeccCCCCCcccCC
Q 018699          126 DYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSGPWQDQG  205 (351)
Q Consensus       126 e~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~~~~~~~~~~  205 (351)
                      ||+++++|.+++..    ...+++.+++.++.|++.|+.|||++|++|+||+|+||+++                 .++.
T Consensus        86 e~~~~~~L~~~~~~----~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nili~-----------------~~~~  144 (267)
T cd06645          86 EFCGGGSLQDIYHV----TGPLSESQIAYVSRETLQGLYYLHSKGKMHRDIKGANILLT-----------------DNGH  144 (267)
T ss_pred             eccCCCcHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEC-----------------CCCC
Confidence            99999999999876    46799999999999999999999999999999999999998                 6778


Q ss_pred             eEEeecCCccccccCCCCccccccccCCCcccceecc---CCCCCccchHhHHHHHHHHHHhCccccccccCCCCCce--
Q 018699          206 LCLVDWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQE---KKPWKFQVDTYGLCAIVHMMLHNSYMEIEKKASPDGGL--  280 (351)
Q Consensus       206 ~~l~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~---~~~~~~~~DiwslG~il~~l~~g~~p~~~~~~~~~~~~--  280 (351)
                      ++|+|||.+......  ........|+..|+|||.+.   ...++.++|+|||||++|+|++|..||....+......  
T Consensus       145 ~~l~dfg~~~~~~~~--~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~DvwSlG~il~~l~~~~~p~~~~~~~~~~~~~~  222 (267)
T cd06645         145 VKLADFGVSAQITAT--IAKRKSFIGTPYWMAPEVAAVERKGGYNQLCDIWAVGITAIELAELQPPMFDLHPMRALFLMT  222 (267)
T ss_pred             EEECcceeeeEccCc--ccccccccCcccccChhhhccccCCCCCchhhhHHHHHHHHHHhcCCCCcccccchhhHHhhh
Confidence            999999988643321  11223456889999999874   45578999999999999999999999865432211000  


Q ss_pred             ---eeecCcchhhhhHHHHHHHHHHHHhcCCCCCChHHHHHHHHHH
Q 018699          281 ---VYLPKLSFKRYWKVELWKSLFTNLLNMSSGNDKEVLQNLQKSF  323 (351)
Q Consensus       281 ---~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~~~~  323 (351)
                         ...+.......++ ..+.++|.+||..+|++||++.+++.|+|
T Consensus       223 ~~~~~~~~~~~~~~~~-~~~~~li~~~l~~~P~~R~~~~~ll~~~~  267 (267)
T cd06645         223 KSNFQPPKLKDKMKWS-NSFHHFVKMALTKNPKKRPTAEKLLQHPF  267 (267)
T ss_pred             ccCCCCCcccccCCCC-HHHHHHHHHHccCCchhCcCHHHHhcCCC
Confidence               0001111111234 67899999999999999999999999976

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated

>cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase

Probab=100.00  E-value=2.6e-39  Score=299.33  Aligned_cols=250  Identities=18%  Similarity=0.177  Sum_probs=187.9

Q ss_pred             eEEEEEEeeccCceEEEEEEecCCCCceEEEEecCCCCChHH---HHHHHHHhhhccccccccccceeeecccC-----e
Q 018699           49 KYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFPWEF---YMYRQLDQRISGRERSSFGFAHRIHLYSD-----Y  120 (351)
Q Consensus        49 ~Y~i~~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~~~e~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~  120 (351)
                      +|++.+.||+|+||+||+|. +..+++.||||.+........   ...++ ...+....|++++....+....+     .
T Consensus         1 ~~~~~~~lg~G~~g~V~~~~-~~~~~~~vaiK~~~~~~~~~~~~~~~~~E-~~~l~~l~h~niv~~~~~~~~~~~~~~~~   78 (372)
T cd07853           1 DVEPDRPIGYGAFGVVWSVT-DPRDGKRVALKKMPNVFQNLVSCKRVFRE-LKMLCFFKHDNVLSALDILQPPHIDPFEE   78 (372)
T ss_pred             CCcccceeeeCCCEEEEEEE-ECCCCCEEEEEeccccccchHHHHHHHHH-HHHHHhCCCCCcCCHhheecCCCccccce
Confidence            47889999999999999999 567889999999875432221   12222 22334456778877777766554     7


Q ss_pred             eEEEEEecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeeccCCCCC
Q 018699          121 SILVCDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSGP  200 (351)
Q Consensus       121 ~~lv~e~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~~~~~  200 (351)
                      .|+||||+ +++|.+.+..    +..+++..++.++.||+.||.|||++||+||||||+||+++                
T Consensus        79 ~~lv~e~~-~~~l~~~~~~----~~~l~~~~~~~~~~qi~~aL~~LH~~~ivH~dlkp~Nili~----------------  137 (372)
T cd07853          79 IYVVTELM-QSDLHKIIVS----PQPLSSDHVKVFLYQILRGLKYLHSAGILHRDIKPGNLLVN----------------  137 (372)
T ss_pred             EEEEeecc-ccCHHHHHhc----CCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCChHHEEEC----------------
Confidence            89999999 4688888765    46799999999999999999999999999999999999999                


Q ss_pred             cccCCeEEeecCCccccccCCCCccccccccCCCcccceeccCC-CCCccchHhHHHHHHHHHHhCccccccccCCCCCc
Q 018699          201 WQDQGLCLVDWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQEKK-PWKFQVDTYGLCAIVHMMLHNSYMEIEKKASPDGG  279 (351)
Q Consensus       201 ~~~~~~~l~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~-~~~~~~DiwslG~il~~l~~g~~p~~~~~~~~~~~  279 (351)
                       .++.++|+|||++...... .........+++.|+|||.+.+. .++.++||||+||++|+|++|+.||..........
T Consensus       138 -~~~~~kL~Dfg~a~~~~~~-~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~  215 (372)
T cd07853         138 -SNCVLKICDFGLARVEEPD-ESKHMTQEVVTQYYRAPEILMGSRHYTSAVDIWSVGCIFAELLGRRILFQAQSPIQQLD  215 (372)
T ss_pred             -CCCCEEeccccceeecccC-ccccCCCCCcCCCcCCHHHHcCCCCCCcHHHHHhHHHHHHHHHcCCCCCCCCCHHHHHH
Confidence             7788999999988643211 11223344678899999998774 47899999999999999999999986543210000


Q ss_pred             e-----------------------e--e-ecCc------chhhhhHHHHHHHHHHHHhcCCCCCChHHHHHHHHHHH
Q 018699          280 L-----------------------V--Y-LPKL------SFKRYWKVELWKSLFTNLLNMSSGNDKEVLQNLQKSFQ  324 (351)
Q Consensus       280 ~-----------------------~--~-~~~~------~~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~~~~~  324 (351)
                      .                       .  . ....      ......+ +.+.+||.+||+.||++||++.|++.|||.
T Consensus       216 ~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~li~~mL~~dP~~R~t~~e~l~hp~~  291 (372)
T cd07853         216 LITDLLGTPSLEAMRSACEGARAHILRGPHKPPSLPVLYTLSSQAT-HEAVHLLCRMLVFDPDKRISAADALAHPYL  291 (372)
T ss_pred             HHHHHcCCCCHHHHHHhhHHHHHHHHhCCCCCCchHHhcccCCCCC-HHHHHHHHHhCCCChhhCcCHHHHhcCHhh
Confidence            0                       0  0 0000      0111122 678999999999999999999999999874

Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription

>cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2

Probab=100.00  E-value=4e-39  Score=288.90  Aligned_cols=255  Identities=21%  Similarity=0.213  Sum_probs=199.8

Q ss_pred             CeeEEEEEEeeccCceEEEEEEecCCCCceEEEEecCCCCChHHHHHHHHHhhhccccccccccceeeecccCeeEEEEE
Q 018699           47 GKKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFPWEFYMYRQLDQRISGRERSSFGFAHRIHLYSDYSILVCD  126 (351)
Q Consensus        47 ~~~Y~i~~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e  126 (351)
                      ..+|++.+.||.|++|+||+|. +..+++.|++|.+..........+......+....|++++.....+..++..++|+|
T Consensus        18 ~~~y~~~~~lg~g~~g~vy~~~-~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e   96 (296)
T cd06655          18 KKKYTRYEKIGQGASGTVFTAI-DVATGQEVAIKQINLQKQPKKELIINEILVMKELKNPNIVNFLDSFLVGDELFVVME   96 (296)
T ss_pred             cceEEEEEEEecCCCeEEEEEE-EcCCCcEEEEEEEecccCchHHHHHHHHHHHHhcCCCceeeeeeeEecCceEEEEEE
Confidence            3579999999999999999999 577889999998865433333333222333455677888888888888889999999


Q ss_pred             ecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeeccCCCCCcccCCe
Q 018699          127 YLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSGPWQDQGL  206 (351)
Q Consensus       127 ~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~~~~~~~~~~~  206 (351)
                      |+++++|..++..     ..+++..+..++.|++.|+.+||++|++|+||+|+||+++                 .++.+
T Consensus        97 ~~~~~~L~~~~~~-----~~l~~~~~~~i~~~l~~al~~LH~~~i~H~dL~p~Nili~-----------------~~~~~  154 (296)
T cd06655          97 YLAGGSLTDVVTE-----TCMDEAQIAAVCRECLQALEFLHANQVIHRDIKSDNVLLG-----------------MDGSV  154 (296)
T ss_pred             ecCCCcHHHHHHh-----cCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEC-----------------CCCCE
Confidence            9999999998865     4689999999999999999999999999999999999998                 67789


Q ss_pred             EEeecCCccccccCCCCccccccccCCCcccceeccCCCCCccchHhHHHHHHHHHHhCccccccccCCCCCcee---ee
Q 018699          207 CLVDWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQEKKPWKFQVDTYGLCAIVHMMLHNSYMEIEKKASPDGGLV---YL  283 (351)
Q Consensus       207 ~l~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~p~~~~~~~~~~~~~---~~  283 (351)
                      +|+|||++.....  .........++..|+|||.+.+..++.++|+|||||++|+|++|..||............   ..
T Consensus       155 kl~dfg~~~~~~~--~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvil~~lltg~~pf~~~~~~~~~~~~~~~~~  232 (296)
T cd06655         155 KLTDFGFCAQITP--EQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLIATNGT  232 (296)
T ss_pred             EEccCccchhccc--ccccCCCcCCCccccCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCC
Confidence            9999998764321  122223346788999999998888899999999999999999999999764432110000   01


Q ss_pred             cCcchhhhhHHHHHHHHHHHHhcCCCCCChHHHHHHHHHHHHHH
Q 018699          284 PKLSFKRYWKVELWKSLFTNLLNMSSGNDKEVLQNLQKSFQDYL  327 (351)
Q Consensus       284 ~~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~~~~~~~~  327 (351)
                      +....+...+ +.+.+||.+||..||++||++.+++.|+|....
T Consensus       233 ~~~~~~~~~~-~~~~~li~~~l~~dp~~Rpt~~~il~~~~~~~~  275 (296)
T cd06655         233 PELQNPEKLS-PIFRDFLNRCLEMDVEKRGSAKELLQHPFLKLA  275 (296)
T ss_pred             cccCCcccCC-HHHHHHHHHHhhcChhhCCCHHHHhhChHhhhc
Confidence            1111222233 778999999999999999999999999986543

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=6.2e-40  Score=291.72  Aligned_cols=262  Identities=18%  Similarity=0.201  Sum_probs=202.0

Q ss_pred             eeEEEEEEeeccCceEEEEEEecCCCCceEEEEecCCCCChHHHHHHHHHhhhccccccccccceeeecccCeeEEEEEe
Q 018699           48 KKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFPWEFYMYRQLDQRISGRERSSFGFAHRIHLYSDYSILVCDY  127 (351)
Q Consensus        48 ~~Y~i~~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~  127 (351)
                      ++|++.+.||.|++|+||+|.+ ..++..||+|.+.................+....|+++......+..++..|+||||
T Consensus         5 ~~~~i~~~l~~g~~~~v~~~~~-~~~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~   83 (280)
T cd06611           5 DIWEIIGELGDGAFGKVYKAQH-KETGLFAAAKIIQIESEEELEDFMVEIDILSECKHPNIVGLYEAYFYENKLWILIEF   83 (280)
T ss_pred             hHHHHHHHhcCCCCceEEEEEE-cCCCcEEEEEEEeeCCHHHHHHHHHHHHHHHhCCCCceeEEEEEEecCCeEEEEeec
Confidence            5799999999999999999994 567899999998755433332222222334445688888888888888899999999


Q ss_pred             cCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeeccCCCCCcccCCeE
Q 018699          128 LSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSGPWQDQGLC  207 (351)
Q Consensus       128 ~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~~~~~~~~~~~~  207 (351)
                      +++++|.+++...   +..+++..++.++.|++.|+.|||++||+|+||+|+||+++                 .++.++
T Consensus        84 ~~~~~L~~~~~~~---~~~l~~~~~~~~~~ql~~~l~~lh~~~i~h~dl~p~nili~-----------------~~~~~~  143 (280)
T cd06611          84 CDGGALDSIMLEL---ERGLTEPQIRYVCRQMLEALNFLHSHKVIHRDLKAGNILLT-----------------LDGDVK  143 (280)
T ss_pred             cCCCcHHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCChhhEEEC-----------------CCCCEE
Confidence            9999999998764   46799999999999999999999999999999999999998                 678899


Q ss_pred             EeecCCccccccCCCCccccccccCCCcccceecc-----CCCCCccchHhHHHHHHHHHHhCccccccccCCCCCce--
Q 018699          208 LVDWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQE-----KKPWKFQVDTYGLCAIVHMMLHNSYMEIEKKASPDGGL--  280 (351)
Q Consensus       208 l~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~-----~~~~~~~~DiwslG~il~~l~~g~~p~~~~~~~~~~~~--  280 (351)
                      |+|||.+.....  .........+++.|+|||.+.     +..++.++|+||||+++|+|++|..||...........  
T Consensus       144 l~d~g~~~~~~~--~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~~~~sDi~slG~il~~l~~g~~p~~~~~~~~~~~~~~  221 (280)
T cd06611         144 LADFGVSAKNKS--TLQKRDTFIGTPYWMAPEVVACETFKDNPYDYKADIWSLGITLIELAQMEPPHHELNPMRVLLKIL  221 (280)
T ss_pred             EccCccchhhcc--cccccceeecchhhcCHHHHhhcccCCCCCCccccHHHHHHHHHHHHhCCCCcccCCHHHHHHHHh
Confidence            999998754321  122223446788999999874     34567899999999999999999999975433210000  


Q ss_pred             -eeecCcchhhhhHHHHHHHHHHHHhcCCCCCChHHHHHHHHHHHHHHhhChHH
Q 018699          281 -VYLPKLSFKRYWKVELWKSLFTNLLNMSSGNDKEVLQNLQKSFQDYLCSNPQL  333 (351)
Q Consensus       281 -~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~~~~~~~~~~~~~~  333 (351)
                       ...+....+..++ ..+.++|.+||+.+|.+||++.++++|+|-.....+..+
T Consensus       222 ~~~~~~~~~~~~~~-~~~~~li~~~l~~~p~~Rps~~~il~~~~~~~~~~~~~~  274 (280)
T cd06611         222 KSEPPTLDQPSKWS-SSFNDFLKSCLVKDPDDRPTAAELLKHPFVSDQSDNKAI  274 (280)
T ss_pred             cCCCCCcCCcccCC-HHHHHHHHHHhccChhhCcCHHHHhcChhhcccchhHHH
Confidence             0011222233455 788999999999999999999999999986655444433

Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti

>PTZ00266 NIMA-related protein kinase; Provisional

Probab=100.00  E-value=2.9e-39  Score=318.83  Aligned_cols=274  Identities=16%  Similarity=0.129  Sum_probs=197.5

Q ss_pred             cCeeEEEEEEeeccCceEEEEEEecCCCCceEEEEecCCCCChH--HHHHHHHHhhhccccccccccceeeec--ccCee
Q 018699           46 GGKKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFPWE--FYMYRQLDQRISGRERSSFGFAHRIHL--YSDYS  121 (351)
Q Consensus        46 ~~~~Y~i~~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~~~e--~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~  121 (351)
                      ..++|++.+.||+|+||+||+|+ +..+++.||+|++......+  ...+......+....|++++.+...+.  ....+
T Consensus        11 ~l~~YeIl~kLG~GgFGtVYLAk-dk~tg~~vAlKvIk~~~l~e~~~~~~~~EI~IL~~L~HPNIVrl~d~f~de~~~~l   89 (1021)
T PTZ00266         11 RLNEYEVIKKIGNGRFGEVFLVK-HKRTQEFFCWKAISYRGLKEREKSQLVIEVNVMRELKHKNIVRYIDRFLNKANQKL   89 (1021)
T ss_pred             ccCCEEEEEEEecCCCeEEEEEE-ECCCCeEEEEEEEeccccCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEecCCCEE
Confidence            34689999999999999999999 56788999999987543322  222222223344556778887776653  34678


Q ss_pred             EEEEEecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHC-------CceecCCCCCcEEEeecCCcceeec
Q 018699          122 ILVCDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDV-------GIIHGDFKPDNLLIRYARDELTVLD  194 (351)
Q Consensus       122 ~lv~e~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~-------~i~H~dl~p~Nill~~~~~~~~~~~  194 (351)
                      |+||||+++++|.+++.........+++..++.|+.||+.||.|||+.       +|+|+||||+|||++.+......+.
T Consensus        90 yIVMEY~~gGSL~~lL~k~~~~~g~L~E~~Il~Ia~QIL~ALaYLHs~g~~~~~k~IVHRDLKPeNILL~s~~~~lg~i~  169 (1021)
T PTZ00266         90 YILMEFCDAGDLSRNIQKCYKMFGKIEEHAIVDITRQLLHALAYCHNLKDGPNGERVLHRDLKPQNIFLSTGIRHIGKIT  169 (1021)
T ss_pred             EEEEeCCCCCcHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhcccccccCCceeccCcHHHeEeecCcccccccc
Confidence            999999999999999987544346799999999999999999999984       4999999999999985322111111


Q ss_pred             cCCCCCcccCCeEEeecCCccccccCCCCccccccccCCCcccceeccC--CCCCccchHhHHHHHHHHHHhCccccccc
Q 018699          195 HDRSGPWQDQGLCLVDWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQEK--KPWKFQVDTYGLCAIVHMMLHNSYMEIEK  272 (351)
Q Consensus       195 ~~~~~~~~~~~~~l~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~--~~~~~~~DiwslG~il~~l~~g~~p~~~~  272 (351)
                      .........+.++|+|||++.....   ........||+.|+|||++.+  ..++.++|||||||++|+|++|..||...
T Consensus       170 ~~~~n~ng~~iVKLsDFGlAr~l~~---~s~~~s~vGTp~YmAPEvL~ge~~~~s~KSDVWSLG~ILYELLTGk~PF~~~  246 (1021)
T PTZ00266        170 AQANNLNGRPIAKIGDFGLSKNIGI---ESMAHSCVGTPYYWSPELLLHETKSYDDKSDMWALGCIIYELCSGKTPFHKA  246 (1021)
T ss_pred             ccccccCCCCceEEccCCccccccc---cccccccCCCccccCHHHHhccCCCCCchhHHHHHHHHHHHHHHCCCCCCcC
Confidence            1111111345699999999865321   122234568999999999854  45789999999999999999999999653


Q ss_pred             cCCCCCc--eeeecCcchhhhhHHHHHHHHHHHHhcCCCCCChHHHHHHHHHHHH
Q 018699          273 KASPDGG--LVYLPKLSFKRYWKVELWKSLFTNLLNMSSGNDKEVLQNLQKSFQD  325 (351)
Q Consensus       273 ~~~~~~~--~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~~~~~~  325 (351)
                      .......  ....+..+.+ ..+ ..+.+||.+||..+|.+||++.|+|.|+|..
T Consensus       247 ~~~~qli~~lk~~p~lpi~-~~S-~eL~dLI~~~L~~dPeeRPSa~QlL~h~~ik  299 (1021)
T PTZ00266        247 NNFSQLISELKRGPDLPIK-GKS-KELNILIKNLLNLSAKERPSALQCLGYQIIK  299 (1021)
T ss_pred             CcHHHHHHHHhcCCCCCcC-CCC-HHHHHHHHHHhcCChhHCcCHHHHhccHHHh
Confidence            3211100  0001111111 123 7899999999999999999999999988754

>KOG4279 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=4e-40  Score=303.14  Aligned_cols=249  Identities=17%  Similarity=0.131  Sum_probs=206.2

Q ss_pred             EEeeccCceEEEEEEecCCCCceEEEEecCCCCChHHHHHHHHHhhhccccccccccceeeecccCeeEEEEEecCCCCH
Q 018699           54 GCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFPWEFYMYRQLDQRISGRERSSFGFAHRIHLYSDYSILVCDYLSQGTL  133 (351)
Q Consensus        54 ~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~sL  133 (351)
                      -+||+|+||+||.|+ +..++...|||.+......+..-+.+.........|.+++...+....++++-+.||-++||+|
T Consensus       581 vVLGKGTYG~VYA~R-D~~tqvrIaIKEIpekdsr~~QPLhEEIaLH~~LrHkNIVrYLGs~senGf~kIFMEqVPGGSL  659 (1226)
T KOG4279|consen  581 VVLGKGTYGTVYAAR-DMDTQVRIAIKEIPEKDSREVQPLHEEIALHSTLRHKNIVRYLGSVSENGFFKIFMEQVPGGSL  659 (1226)
T ss_pred             EEeecCceeEEEeec-cccceeEEEeeecccccchhhccHHHHHHHHHHHhhHhHHHHhhccCCCCeEEEEeecCCCCcH
Confidence            379999999999999 6788889999998766555554444444445566677888888878778888999999999999


Q ss_pred             HHHHHHHHhhCCCh--hHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeeccCCCCCcccCCeEEeec
Q 018699          134 QDAINSYVVIGKSM--EEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSGPWQDQGLCLVDW  211 (351)
Q Consensus       134 ~~~l~~~~~~~~~l--~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~~~~~~~~~~~~l~Df  211 (351)
                      .+++...   =+++  ++.++..+.+||++||+|||++.|||||||-+|++++.                =.|.+||+||
T Consensus       660 SsLLrsk---WGPlKDNEstm~fYtkQILeGLkYLHen~IVHRDIKGDNVLvNT----------------ySGvlKISDF  720 (1226)
T KOG4279|consen  660 SSLLRSK---WGPLKDNESTMNFYTKQILEGLKYLHENKIVHRDIKGDNVLVNT----------------YSGVLKISDF  720 (1226)
T ss_pred             HHHHHhc---cCCCccchhHHHHHHHHHHHHhhhhhhcceeeccccCCcEEEee----------------ccceEEeccc
Confidence            9999874   3566  88999999999999999999999999999999999994                4578999999


Q ss_pred             CCccccccCCCCccccccccCCCcccceeccCC--CCCccchHhHHHHHHHHHHhCccccccccCCCCCce---eeecCc
Q 018699          212 GRGIDLHLFPDNMEFEGDCRTSGFRCIEMQEKK--PWKFQVDTYGLCAIVHMMLHNSYMEIEKKASPDGGL---VYLPKL  286 (351)
Q Consensus       212 g~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~--~~~~~~DiwslG~il~~l~~g~~p~~~~~~~~~~~~---~~~~~~  286 (351)
                      |-+......  +....++.||..|||||++..+  .|+.++|||||||++.||.||++||..........+   .+...+
T Consensus       721 GTsKRLAgi--nP~TETFTGTLQYMAPEvIDqG~RGYG~aADIWS~GCT~vEMATGrPPF~ElgspqAAMFkVGmyKvHP  798 (1226)
T KOG4279|consen  721 GTSKRLAGI--NPCTETFTGTLQYMAPEVIDQGPRGYGKAADIWSFGCTMVEMATGRPPFVELGSPQAAMFKVGMYKVHP  798 (1226)
T ss_pred             ccchhhccC--CccccccccchhhhChHhhccCCcCCCchhhhhhccceeEeeccCCCCeeecCChhHhhhhhcceecCC
Confidence            988654432  3345667899999999999654  578999999999999999999999987544322222   346777


Q ss_pred             chhhhhHHHHHHHHHHHHhcCCCCCChHHHHHHHHHHHH
Q 018699          287 SFKRYWKVELWKSLFTNLLNMSSGNDKEVLQNLQKSFQD  325 (351)
Q Consensus       287 ~~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~~~~~~  325 (351)
                      ++|+..+ .+++.||.+|+.+||..||++.++|.+||-.
T Consensus       799 ~iPeels-aeak~FilrcFepd~~~R~sA~~LL~DpFlq  836 (1226)
T KOG4279|consen  799 PIPEELS-AEAKNFILRCFEPDPCDRPSAKDLLQDPFLQ  836 (1226)
T ss_pred             CCcHHHH-HHHHHHHHHHcCCCcccCccHHHhccCcccc
Confidence            8888888 9999999999999999999999999998743

>cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta

Probab=100.00  E-value=8e-40  Score=297.94  Aligned_cols=254  Identities=19%  Similarity=0.250  Sum_probs=192.5

Q ss_pred             eeEEEEEEeeccCceEEEEEEecCCCCceEEEEecCCCCC---hHHHHHHHHHhhhccccccccccceeeecccCeeEEE
Q 018699           48 KKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFP---WEFYMYRQLDQRISGRERSSFGFAHRIHLYSDYSILV  124 (351)
Q Consensus        48 ~~Y~i~~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~~---~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv  124 (351)
                      ++|++.+.||+|+||+||+|+ +..+++.||+|++.+...   .+...+...........++++......+...+..|+|
T Consensus         1 d~y~i~~~lG~G~fg~V~~~~-~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~l~~~~~~~~~~~lv   79 (331)
T cd05624           1 DDFEIIKVIGRGAFGEVAVVK-MKHTERIYAMKILNKWEMLKRAETACFREERNVLVNGDCQWITTLHYAFQDENYLYLV   79 (331)
T ss_pred             CCceEEEEEeeCCCeEEEEEE-ECCCCCEEEEEEEeHHHHHhhHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEEE
Confidence            479999999999999999999 567789999999864211   1222233333334455677788888888888999999


Q ss_pred             EEecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeeccCCCCCcccC
Q 018699          125 CDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSGPWQDQ  204 (351)
Q Consensus       125 ~e~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~~~~~~~~~  204 (351)
                      |||++||+|.+++...   +..+++..+..++.|++.||.|||++||+||||||+||+++                 .++
T Consensus        80 ~Ey~~gg~L~~~l~~~---~~~l~~~~~~~~~~qi~~~L~~lH~~~iiHrDlkp~Nill~-----------------~~~  139 (331)
T cd05624          80 MDYYVGGDLLTLLSKF---EDRLPEDMARFYIAEMVLAIHSIHQLHYVHRDIKPDNVLLD-----------------MNG  139 (331)
T ss_pred             EeCCCCCcHHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCchHHEEEc-----------------CCC
Confidence            9999999999999864   45789999999999999999999999999999999999998                 677


Q ss_pred             CeEEeecCCccccccCCCCccccccccCCCcccceeccC-----CCCCccchHhHHHHHHHHHHhCccccccccCCCCCc
Q 018699          205 GLCLVDWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQEK-----KPWKFQVDTYGLCAIVHMMLHNSYMEIEKKASPDGG  279 (351)
Q Consensus       205 ~~~l~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~-----~~~~~~~DiwslG~il~~l~~g~~p~~~~~~~~~~~  279 (351)
                      .++|+|||++....... ........|++.|+|||++.+     ..++.++||||+||++|+|++|..||..........
T Consensus       140 ~~kl~DfG~a~~~~~~~-~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~~~~~~~~~  218 (331)
T cd05624         140 HIRLADFGSCLKMNQDG-TVQSSVAVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPFYAESLVETYG  218 (331)
T ss_pred             CEEEEeccceeeccCCC-ceeeccccCCcccCCHHHHhccccCCCCCCCcccEEeeehhhhhhhhCCCCccCCCHHHHHH
Confidence            89999999986533211 111223468999999999865     457889999999999999999999997543221100


Q ss_pred             eee--ecCcchhhh---hHHHHHHHHHHHHhcCCCCC--ChHHHHHHHHHHH
Q 018699          280 LVY--LPKLSFKRY---WKVELWKSLFTNLLNMSSGN--DKEVLQNLQKSFQ  324 (351)
Q Consensus       280 ~~~--~~~~~~~~~---~~~~~~~~li~~~L~~dP~~--R~s~~e~l~~~~~  324 (351)
                      ...  ....+++..   .+ +.++++|.+||..++.+  |+++++++.|+|.
T Consensus       219 ~i~~~~~~~~~p~~~~~~~-~~~~~li~~ll~~~~~~~~~~~~~~~~~h~~f  269 (331)
T cd05624         219 KIMNHEERFQFPSHITDVS-EEAKDLIQRLICSRERRLGQNGIEDFKKHAFF  269 (331)
T ss_pred             HHHcCCCcccCCCccccCC-HHHHHHHHHHccCchhhcCCCCHHHHhcCCCc
Confidence            000  011112221   23 78999999999976655  4689999999864

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues.

>cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase

Probab=100.00  E-value=2.8e-39  Score=289.11  Aligned_cols=249  Identities=19%  Similarity=0.207  Sum_probs=198.3

Q ss_pred             eeEEEEEEeeccCceEEEEEEecCCCCceEEEEecCCCCChH---HHHHHHHHhhhccccccccccceeeecccCeeEEE
Q 018699           48 KKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFPWE---FYMYRQLDQRISGRERSSFGFAHRIHLYSDYSILV  124 (351)
Q Consensus        48 ~~Y~i~~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~~~e---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv  124 (351)
                      ++|++.+.||.|++|.||+|. +..+++.||+|++.......   ...+......+....|++++........++..|+|
T Consensus         1 ~~y~~~~~ig~g~~~~vy~~~-~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v   79 (290)
T cd05580           1 DDFEFIKTLGTGSFGRVMLVR-HKGSGKYYALKILSKAKIVKLKQVEHVLNEKRILQSIRHPFLVNLYGSFQDDSNLYLV   79 (290)
T ss_pred             CceEEEEEeecCCCeEEEEEE-EcCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCccceeeEEEcCCeEEEE
Confidence            479999999999999999999 46678999999986532211   11122222334445588888888888888999999


Q ss_pred             EEecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeeccCCCCCcccC
Q 018699          125 CDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSGPWQDQ  204 (351)
Q Consensus       125 ~e~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~~~~~~~~~  204 (351)
                      |||+++++|.+++..    ...+++..+..++.|++.||.+||+.|++|+||+|+||+++                 .++
T Consensus        80 ~e~~~~~~L~~~~~~----~~~l~~~~~~~~~~qil~~l~~lH~~~i~H~dl~p~nili~-----------------~~~  138 (290)
T cd05580          80 MEYVPGGELFSHLRK----SGRFPEPVARFYAAQVVLALEYLHSLDIVYRDLKPENLLLD-----------------SDG  138 (290)
T ss_pred             EecCCCCCHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHEEEC-----------------CCC
Confidence            999999999999987    46799999999999999999999999999999999999999                 677


Q ss_pred             CeEEeecCCccccccCCCCccccccccCCCcccceeccCCCCCccchHhHHHHHHHHHHhCccccccccCCCCCceeeec
Q 018699          205 GLCLVDWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQEKKPWKFQVDTYGLCAIVHMMLHNSYMEIEKKASPDGGLVYLP  284 (351)
Q Consensus       205 ~~~l~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~p~~~~~~~~~~~~~~~~  284 (351)
                      .++|+|||++.....   .  .....+++.|+|||.+.+..++.++||||||+++|+|++|..||...............
T Consensus       139 ~~kl~dfg~~~~~~~---~--~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~  213 (290)
T cd05580         139 YIKITDFGFAKRVKG---R--TYTLCGTPEYLAPEIILSKGYGKAVDWWALGILIYEMLAGYPPFFDDNPIQIYEKILEG  213 (290)
T ss_pred             CEEEeeCCCccccCC---C--CCCCCCCccccChhhhcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcC
Confidence            899999998864321   1  23446789999999998888889999999999999999999998654422111111122


Q ss_pred             CcchhhhhHHHHHHHHHHHHhcCCCCCCh-----HHHHHHHHHHH
Q 018699          285 KLSFKRYWKVELWKSLFTNLLNMSSGNDK-----EVLQNLQKSFQ  324 (351)
Q Consensus       285 ~~~~~~~~~~~~~~~li~~~L~~dP~~R~-----s~~e~l~~~~~  324 (351)
                      ...++..++ ..++++|.+||..||.+|+     ++.+++.|+|.
T Consensus       214 ~~~~~~~~~-~~l~~li~~~l~~~p~~R~~~~~~~~~~l~~~~~~  257 (290)
T cd05580         214 KVRFPSFFS-PDAKDLIRNLLQVDLTKRLGNLKNGVNDIKNHPWF  257 (290)
T ss_pred             CccCCccCC-HHHHHHHHHHccCCHHHccCcccCCHHHHHcCccc
Confidence            334444455 8899999999999999999     88999999874

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi

>KOG4721 consensus Serine/threonine protein kinase, contains leucine zipper domain [Signal transduction mechanisms]

Probab=100.00  E-value=3.6e-40  Score=297.55  Aligned_cols=274  Identities=18%  Similarity=0.170  Sum_probs=220.7

Q ss_pred             CCcceEEEEcCeeEEEEEEeeccCceEEEEEEecCCCCceEEEEecCCCCChHHHHHHHHHhhhccccccccccceeeec
Q 018699           37 SSRNKTIEIGGKKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFPWEFYMYRQLDQRISGRERSSFGFAHRIHL  116 (351)
Q Consensus        37 ~~~~~~~~i~~~~Y~i~~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~  116 (351)
                      ..+...++|..+...-++-||+|+.|.||+|+.+   ++.||||+++.-...++..+       ..+.|+++..+..++.
T Consensus       113 ~qq~e~WeiPFe~IsELeWlGSGaQGAVF~Grl~---netVAVKKV~elkETdIKHL-------RkLkH~NII~FkGVCt  182 (904)
T KOG4721|consen  113 QQQEELWEIPFEEISELEWLGSGAQGAVFLGRLH---NETVAVKKVRELKETDIKHL-------RKLKHPNIITFKGVCT  182 (904)
T ss_pred             hhhhhhccCCHHHhhhhhhhccCcccceeeeecc---CceehhHHHhhhhhhhHHHH-------HhccCcceeeEeeeec
Confidence            3344566666666666788999999999999953   57799999875444444333       4456678888999999


Q ss_pred             ccCeeEEEEEecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeeccC
Q 018699          117 YSDYSILVCDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHD  196 (351)
Q Consensus       117 ~~~~~~lv~e~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~  196 (351)
                      ....+|||||||+.|.|.+.+..    +.+++......|.++|+.|+.|||.+.|||||||.-||||.            
T Consensus       183 qsPcyCIiMEfCa~GqL~~VLka----~~~itp~llv~Wsk~IA~GM~YLH~hKIIHRDLKSPNiLIs------------  246 (904)
T KOG4721|consen  183 QSPCYCIIMEFCAQGQLYEVLKA----GRPITPSLLVDWSKGIAGGMNYLHLHKIIHRDLKSPNILIS------------  246 (904)
T ss_pred             CCceeEEeeeccccccHHHHHhc----cCccCHHHHHHHHHHhhhhhHHHHHhhHhhhccCCCceEee------------
Confidence            99999999999999999999998    67899999999999999999999999999999999999999            


Q ss_pred             CCCCcccCCeEEeecCCccccccCCCCccccccccCCCcccceeccCCCCCccchHhHHHHHHHHHHhCccccccccCC-
Q 018699          197 RSGPWQDQGLCLVDWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQEKKPWKFQVDTYGLCAIVHMMLHNSYMEIEKKAS-  275 (351)
Q Consensus       197 ~~~~~~~~~~~l~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~p~~~~~~~-  275 (351)
                           .+..+||+|||-+...+.   ....-.+.||..|||||++...+.+.++||||+||+||||+||..||..-... 
T Consensus       247 -----~~d~VKIsDFGTS~e~~~---~STkMSFaGTVaWMAPEvIrnePcsEKVDIwSfGVVLWEmLT~EiPYkdVdssA  318 (904)
T KOG4721|consen  247 -----YDDVVKISDFGTSKELSD---KSTKMSFAGTVAWMAPEVIRNEPCSEKVDIWSFGVVLWEMLTGEIPYKDVDSSA  318 (904)
T ss_pred             -----ccceEEeccccchHhhhh---hhhhhhhhhhHhhhCHHHhhcCCcccccceehhHHHHHHHHhcCCCccccchhe
Confidence                 556699999998765432   24455678999999999999999999999999999999999999999754432 


Q ss_pred             -CCCceeeecCcchhhhhHHHHHHHHHHHHhcCCCCCChHHHHHHHHHH-----------HHHHhhChHHHHHHHHHHHH
Q 018699          276 -PDGGLVYLPKLSFKRYWKVELWKSLFTNLLNMSSGNDKEVLQNLQKSF-----------QDYLCSNPQLLKNLKELLAK  343 (351)
Q Consensus       276 -~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~~~~-----------~~~~~~~~~~~~~~~~~~~~  343 (351)
                       ..+--......+.|..+. +.++-||++||+-.|.+||++.|+|.|+=           +.|+.+....++..+-++.+
T Consensus       319 IIwGVGsNsL~LpvPstcP-~GfklL~Kqcw~sKpRNRPSFrqil~HldIa~pell~~tee~yf~sq~swrEevk~h~~~  397 (904)
T KOG4721|consen  319 IIWGVGSNSLHLPVPSTCP-DGFKLLLKQCWNSKPRNRPSFRQILLHLDIASPELLSTTEETYFKSQASWREEVKLHFEK  397 (904)
T ss_pred             eEEeccCCcccccCcccCc-hHHHHHHHHHHhcCCCCCccHHHHHHHHhhcCHHHhcccHHHHHHHHHHHHHHHHHhhhh
Confidence             111111234455666666 89999999999999999999999999852           56677776666666666655


Q ss_pred             hh
Q 018699          344 QR  345 (351)
Q Consensus       344 ~~  345 (351)
                      .+
T Consensus       398 it  399 (904)
T KOG4721|consen  398 IT  399 (904)
T ss_pred             hc
Confidence            43

>cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha

Probab=100.00  E-value=1.3e-39  Score=296.69  Aligned_cols=254  Identities=20%  Similarity=0.250  Sum_probs=191.0

Q ss_pred             eeEEEEEEeeccCceEEEEEEecCCCCceEEEEecCCCCC---hHHHHHHHHHhhhccccccccccceeeecccCeeEEE
Q 018699           48 KKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFP---WEFYMYRQLDQRISGRERSSFGFAHRIHLYSDYSILV  124 (351)
Q Consensus        48 ~~Y~i~~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~~---~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv  124 (351)
                      ++|++.+.||+|+||+||+++ ...+++.||+|++.+...   .+...+...........++++......+...+.+|+|
T Consensus         1 ~~y~~~~~lG~G~fg~V~~~~-~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv   79 (332)
T cd05623           1 EDFEILKVIGRGAFGEVAVVK-LKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDNQWITTLHYAFQDENNLYLV   79 (332)
T ss_pred             CCceEEEEEEeCCCeEEEEEE-ECCCCCEEEEEEEeHHHHHHhhHHHHHHHHHHHHhhCCCCCEeeEEEEEecCCEEEEE
Confidence            479999999999999999999 467789999999864211   1112222223333445667777777777778899999


Q ss_pred             EEecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeeccCCCCCcccC
Q 018699          125 CDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSGPWQDQ  204 (351)
Q Consensus       125 ~e~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~~~~~~~~~  204 (351)
                      |||+++|+|.+++...   +..+++..++.++.||+.|+.|||++||+||||||+||+++                 .++
T Consensus        80 ~ey~~~g~L~~~l~~~---~~~l~~~~~~~~~~qi~~al~~lH~~~iiHrDlkp~Nili~-----------------~~~  139 (332)
T cd05623          80 MDYYVGGDLLTLLSKF---EDRLPEDMARFYLAEMVIAIDSVHQLHYVHRDIKPDNILMD-----------------MNG  139 (332)
T ss_pred             EeccCCCcHHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHEEEC-----------------CCC
Confidence            9999999999999764   46789999999999999999999999999999999999998                 677


Q ss_pred             CeEEeecCCccccccCCCCccccccccCCCcccceecc-----CCCCCccchHhHHHHHHHHHHhCccccccccCCCCCc
Q 018699          205 GLCLVDWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQE-----KKPWKFQVDTYGLCAIVHMMLHNSYMEIEKKASPDGG  279 (351)
Q Consensus       205 ~~~l~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~-----~~~~~~~~DiwslG~il~~l~~g~~p~~~~~~~~~~~  279 (351)
                      .++|+|||++...... .........||+.|+|||++.     ...++.++|||||||++|+|++|..||..........
T Consensus       140 ~~kL~DfG~a~~~~~~-~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwSlGvil~ell~g~~Pf~~~~~~~~~~  218 (332)
T cd05623         140 HIRLADFGSCLKLMED-GTVQSSVAVGTPDYISPEILQAMEDGKGKYGPECDWWSLGVCMYEMLYGETPFYAESLVETYG  218 (332)
T ss_pred             CEEEeecchheecccC-CcceecccccCccccCHHHHhccccCCCCCCCcCCEEeeHHHHHHHhcCCCCCCCCCHHHHHH
Confidence            8999999988643211 111223356899999999985     3457899999999999999999999997544321111


Q ss_pred             eee--ecCcchh---hhhHHHHHHHHHHHHhcCCCCC--ChHHHHHHHHHHH
Q 018699          280 LVY--LPKLSFK---RYWKVELWKSLFTNLLNMSSGN--DKEVLQNLQKSFQ  324 (351)
Q Consensus       280 ~~~--~~~~~~~---~~~~~~~~~~li~~~L~~dP~~--R~s~~e~l~~~~~  324 (351)
                      ...  .....++   ...+ +.+++||.+||..++++  |+++.+++.|+|.
T Consensus       219 ~i~~~~~~~~~p~~~~~~s-~~~~~li~~ll~~~~~r~~r~~~~~~~~h~~f  269 (332)
T cd05623         219 KIMNHKERFQFPAQVTDVS-EDAKDLIRRLICSREHRLGQNGIEDFKQHPFF  269 (332)
T ss_pred             HHhCCCccccCCCccccCC-HHHHHHHHHHccChhhhcCCCCHHHHhCCCCc
Confidence            000  0111111   1233 78999999999765555  6899999999864

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw

>PRK13184 pknD serine/threonine-protein kinase; Reviewed

Probab=100.00  E-value=1.5e-38  Score=312.50  Aligned_cols=266  Identities=20%  Similarity=0.204  Sum_probs=200.8

Q ss_pred             eeEEEEEEeeccCceEEEEEEecCCCCceEEEEecCCCCChHH---HHHHHHHhhhccccccccccceeeecccCeeEEE
Q 018699           48 KKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFPWEF---YMYRQLDQRISGRERSSFGFAHRIHLYSDYSILV  124 (351)
Q Consensus        48 ~~Y~i~~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~~~e~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv  124 (351)
                      ++|++.++||+|+||+||+|+ +..+++.||+|++........   ..+...........|++++....+...++..|+|
T Consensus         2 grYeIi~~LGkGgfG~VYlA~-d~~tg~~VAIK~I~~~l~~~e~~~~rflrEi~ILs~L~HPNIVkl~~v~~d~~~lyLV   80 (932)
T PRK13184          2 QRYDIIRLIGKGGMGEVYLAY-DPVCSRRVALKKIREDLSENPLLKKRFLREAKIAADLIHPGIVPVYSICSDGDPVYYT   80 (932)
T ss_pred             CCeEEEEEEecCCCEEEEEEE-ECCCCcEEEEEEECcccccCHHHHHHHHHHHHHHHhCCCcCcCeEEEEEeeCCEEEEE
Confidence            589999999999999999999 577889999999875432211   1111222334455688888888888888899999


Q ss_pred             EEecCCCCHHHHHHHHHhh-------CCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeeccCC
Q 018699          125 CDYLSQGTLQDAINSYVVI-------GKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDR  197 (351)
Q Consensus       125 ~e~~~~~sL~~~l~~~~~~-------~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~~  197 (351)
                      |||++|++|.+++......       ...++...+..++.||+.||+|||++||+||||||+||+++             
T Consensus        81 MEY~eGGSL~~lL~s~~~~~~l~e~~~~~lsv~~iL~I~~QIa~AL~yLHs~GIIHRDLKPeNILLd-------------  147 (932)
T PRK13184         81 MPYIEGYTLKSLLKSVWQKESLSKELAEKTSVGAFLSIFHKICATIEYVHSKGVLHRDLKPDNILLG-------------  147 (932)
T ss_pred             EEcCCCCCHHHHHHHhhhccccchhhhcccCHHHHHHHHHHHHHHHHHHHHCCccccCCchheEEEc-------------
Confidence            9999999999998753211       12345667889999999999999999999999999999999             


Q ss_pred             CCCcccCCeEEeecCCccccccCCC----------------CccccccccCCCcccceeccCCCCCccchHhHHHHHHHH
Q 018699          198 SGPWQDQGLCLVDWGRGIDLHLFPD----------------NMEFEGDCRTSGFRCIEMQEKKPWKFQVDTYGLCAIVHM  261 (351)
Q Consensus       198 ~~~~~~~~~~l~Dfg~a~~~~~~~~----------------~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~  261 (351)
                          .++.++|+|||++........                .......+||+.|+|||.+.+..++.++|||||||++|+
T Consensus       148 ----~dg~vKLiDFGLAk~i~~~~~~~~~l~~~~~~s~~s~~t~~g~~vGT~~YmAPE~l~g~~~S~kSDIWSLGVILyE  223 (932)
T PRK13184        148 ----LFGEVVILDWGAAIFKKLEEEDLLDIDVDERNICYSSMTIPGKIVGTPDYMAPERLLGVPASESTDIYALGVILYQ  223 (932)
T ss_pred             ----CCCCEEEEecCcceecccccccccccccccccccccccccCCCCCCCCCCCCHHHhcCCCCCcHhHHHHHHHHHHH
Confidence                677899999999865421100                011123468999999999999999999999999999999


Q ss_pred             HHhCccccccccCCCC--CceeeecCcch-hhhhHHHHHHHHHHHHhcCCCCCChHHHHHHHHHHHHHHhhChH
Q 018699          262 MLHNSYMEIEKKASPD--GGLVYLPKLSF-KRYWKVELWKSLFTNLLNMSSGNDKEVLQNLQKSFQDYLCSNPQ  332 (351)
Q Consensus       262 l~~g~~p~~~~~~~~~--~~~~~~~~~~~-~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~~~~~~~~~~~~~  332 (351)
                      |++|..||........  ......+.... ....+ +.+.+++.+||..||++|+++.+++.+.++.++...++
T Consensus       224 LLTG~~PF~~~~~~ki~~~~~i~~P~~~~p~~~iP-~~L~~LI~rcL~~DP~kR~ss~eeLl~~Le~~lq~~p~  296 (932)
T PRK13184        224 MLTLSFPYRRKKGRKISYRDVILSPIEVAPYREIP-PFLSQIAMKALAVDPAERYSSVQELKQDLEPHLQGSPE  296 (932)
T ss_pred             HHHCCCCCCCcchhhhhhhhhccChhhccccccCC-HHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHhcCcc
Confidence            9999999975432210  00000010000 01223 67899999999999999999999999988888776554

>cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase

Probab=100.00  E-value=6.5e-39  Score=288.23  Aligned_cols=256  Identities=18%  Similarity=0.209  Sum_probs=193.4

Q ss_pred             CeeEEEEEEeeccCceEEEEEEecCCCCceEEEEecCCCCCh--HHHHHHHHHhhhccccccccccceeeecccCeeEEE
Q 018699           47 GKKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFPW--EFYMYRQLDQRISGRERSSFGFAHRIHLYSDYSILV  124 (351)
Q Consensus        47 ~~~Y~i~~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~~~--e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv  124 (351)
                      -++|++.+.||.|+||.||+|+ +..+++.||+|.+......  ...... .........|+++.....+...++..++|
T Consensus         5 ~~~y~~~~~lg~g~~g~vy~~~-~~~~~~~vaiK~~~~~~~~~~~~~~~~-E~~~l~~l~h~nI~~~~~~~~~~~~~~lv   82 (301)
T cd07873           5 LETYIKLDKLGEGTYATVYKGR-SKLTDNLVALKEIRLEHEEGAPCTAIR-EVSLLKDLKHANIVTLHDIIHTEKSLTLV   82 (301)
T ss_pred             ccceEEeeEeccCcCEEEEEEE-EcCCCcEEEEEEEecccccCchhHHHH-HHHHHHhcCCCCcceEEEEEecCCeEEEE
Confidence            4689999999999999999999 5677899999987643221  111212 22334455678888888888888999999


Q ss_pred             EEecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeeccCCCCCcccC
Q 018699          125 CDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSGPWQDQ  204 (351)
Q Consensus       125 ~e~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~~~~~~~~~  204 (351)
                      |||+. ++|.+++...   +..+++..++.++.|++.|+.|||++||+|+||+|+||+++                 .++
T Consensus        83 ~e~~~-~~l~~~l~~~---~~~~~~~~~~~~~~qi~~aL~~lH~~~i~H~dlkp~Nil~~-----------------~~~  141 (301)
T cd07873          83 FEYLD-KDLKQYLDDC---GNSINMHNVKLFLFQLLRGLNYCHRRKVLHRDLKPQNLLIN-----------------ERG  141 (301)
T ss_pred             Eeccc-cCHHHHHHhc---CCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCCHHHEEEC-----------------CCC
Confidence            99995 6998888764   45788999999999999999999999999999999999999                 677


Q ss_pred             CeEEeecCCccccccCCCCccccccccCCCcccceeccC-CCCCccchHhHHHHHHHHHHhCccccccccCCC-------
Q 018699          205 GLCLVDWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQEK-KPWKFQVDTYGLCAIVHMMLHNSYMEIEKKASP-------  276 (351)
Q Consensus       205 ~~~l~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~~DiwslG~il~~l~~g~~p~~~~~~~~-------  276 (351)
                      .++|+|||++.....  .........+++.|+|||.+.+ ..++.++|||||||++|+|++|.+||...+...       
T Consensus       142 ~~kl~dfg~~~~~~~--~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~tg~~~f~~~~~~~~~~~~~~  219 (301)
T cd07873         142 ELKLADFGLARAKSI--PTKTYSNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMSTGRPLFPGSTVEEQLHFIFR  219 (301)
T ss_pred             cEEECcCcchhccCC--CCCcccccceeecccCcHHHhCCCCCccHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHH
Confidence            899999998864321  1122233456889999999865 457889999999999999999999986543210       


Q ss_pred             ------CCc---------eeeecCcc--------hhhhhHHHHHHHHHHHHhcCCCCCChHHHHHHHHHHHHHHh
Q 018699          277 ------DGG---------LVYLPKLS--------FKRYWKVELWKSLFTNLLNMSSGNDKEVLQNLQKSFQDYLC  328 (351)
Q Consensus       277 ------~~~---------~~~~~~~~--------~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~~~~~~~~~  328 (351)
                            ...         +.....+.        .....+ +.+++||.+||++||.+|||+.|++.|+|...+.
T Consensus       220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~li~~ml~~dp~~R~t~~eil~h~~f~~~~  293 (301)
T cd07873         220 ILGTPTEETWPGILSNEEFKSYNYPKYRADCLHNHAPRLD-SDGAELLSKLLQFEGRKRISAEEAMKHPYFHCLG  293 (301)
T ss_pred             HcCCCChhhchhhhccccccccccCccccccHHhhcCCCC-HHHHHHHHHHhcCCcccCcCHHHHhcCccccccc
Confidence                  000         00000000        001123 6789999999999999999999999998865544

Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl

>cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=5.2e-39  Score=284.90  Aligned_cols=267  Identities=19%  Similarity=0.184  Sum_probs=204.4

Q ss_pred             eeEEEEEEeeccCceEEEEEEecCCCCceEEEEecCCCCC-hHHHHHHHHHhhhccccccccccceeeecccCeeEEEEE
Q 018699           48 KKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFP-WEFYMYRQLDQRISGRERSSFGFAHRIHLYSDYSILVCD  126 (351)
Q Consensus        48 ~~Y~i~~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~~-~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e  126 (351)
                      ++|++.+.||.|++|.||+|. +..+++.||+|.+..+.. .....+...........|+++......+..+...++|+|
T Consensus         1 ~~y~~~~~lg~g~~~~v~~~~-~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e   79 (274)
T cd06609           1 ELFTLLECIGKGSFGEVYKAI-DKRTNQVVAIKVIDLEEAEDEIEDIQQEIQFLSQCRSPYITKYYGSFLKGSKLWIIME   79 (274)
T ss_pred             ChhhhhhhhcCCCCeEEEEEE-ECCCCeEEEEEEeeccccchHHHHHHHHHHHHHHcCCCCeeeeeEEEEECCeEEEEEE
Confidence            479999999999999999999 567789999999875532 222222222233444557888888888888889999999


Q ss_pred             ecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeeccCCCCCcccCCe
Q 018699          127 YLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSGPWQDQGL  206 (351)
Q Consensus       127 ~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~~~~~~~~~~~  206 (351)
                      |+++++|.+++..     ..+++..++.++.|++.|+.+||+++++|+||+|+||+++                 .++.+
T Consensus        80 ~~~~~~L~~~~~~-----~~~~~~~~~~~~~ql~~~l~~lh~~~i~h~dl~p~ni~i~-----------------~~~~~  137 (274)
T cd06609          80 YCGGGSCLDLLKP-----GKLDETYIAFILREVLLGLEYLHEEGKIHRDIKAANILLS-----------------EEGDV  137 (274)
T ss_pred             eeCCCcHHHHHhh-----cCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEEC-----------------CCCCE
Confidence            9999999999876     3789999999999999999999999999999999999999                 77889


Q ss_pred             EEeecCCccccccCCCCccccccccCCCcccceeccCCCCCccchHhHHHHHHHHHHhCccccccccCCCCCce-eeecC
Q 018699          207 CLVDWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQEKKPWKFQVDTYGLCAIVHMMLHNSYMEIEKKASPDGGL-VYLPK  285 (351)
Q Consensus       207 ~l~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~p~~~~~~~~~~~~-~~~~~  285 (351)
                      +|+|||.+......  ........+++.|+|||.+.+..++.++|+||||+++|+|++|..||....+...... .....
T Consensus       138 ~l~d~g~~~~~~~~--~~~~~~~~~~~~y~~PE~~~~~~~~~~sDv~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~  215 (274)
T cd06609         138 KLADFGVSGQLTST--MSKRNTFVGTPFWMAPEVIKQSGYDEKADIWSLGITAIELAKGEPPLSDLHPMRVLFLIPKNNP  215 (274)
T ss_pred             EEcccccceeeccc--ccccccccCCccccChhhhccCCCCchhhHHHHHHHHHHHHhCCCCcccCchHHHHHHhhhcCC
Confidence            99999988654322  1222344678889999999888899999999999999999999999975443211000 01111


Q ss_pred             cchhhh-hHHHHHHHHHHHHhcCCCCCChHHHHHHHHHHHHHHhhChHHHHHHHHHH
Q 018699          286 LSFKRY-WKVELWKSLFTNLLNMSSGNDKEVLQNLQKSFQDYLCSNPQLLKNLKELL  341 (351)
Q Consensus       286 ~~~~~~-~~~~~~~~li~~~L~~dP~~R~s~~e~l~~~~~~~~~~~~~~~~~~~~~~  341 (351)
                      ...+.. .+ ..+.++|.+||..||++||++.+++.|+|...-+.+ .+...+.+..
T Consensus       216 ~~~~~~~~~-~~~~~~l~~~l~~~p~~Rpt~~~il~~~~~~~~~~~-~~~~~~~~~~  270 (274)
T cd06609         216 PSLEGNKFS-KPFKDFVSLCLNKDPKERPSAKELLKHKFIKKAKKT-SYLTLLIERI  270 (274)
T ss_pred             CCCcccccC-HHHHHHHHHHhhCChhhCcCHHHHhhChhhcCCCcc-cHHHHHHHHH
Confidence            111211 33 678999999999999999999999999886655544 2444444443

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN)

>cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1

Probab=100.00  E-value=5.3e-39  Score=285.36  Aligned_cols=269  Identities=18%  Similarity=0.184  Sum_probs=207.5

Q ss_pred             eeEEEEEEeeccCceEEEEEEecCCCCceEEEEecCCCCCh-HHHHHHHHHhhhccccccccccceeeecccCeeEEEEE
Q 018699           48 KKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFPW-EFYMYRQLDQRISGRERSSFGFAHRIHLYSDYSILVCD  126 (351)
Q Consensus        48 ~~Y~i~~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~~~-e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e  126 (351)
                      ..|++.+.||.|++|.||+|. +..+++.||+|.+...... ....+...........|++++.....+..++..|+|||
T Consensus         4 ~~y~~~~~l~~g~~~~vy~~~-~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e   82 (277)
T cd06642           4 ELFTKLERIGKGSFGEVYKGI-DNRTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYITRYYGSYLKGTKLWIIME   82 (277)
T ss_pred             HHHHHHHHhcCCCCeeEEEEE-EcCCCeEEEEEEeccccchHHHHHHHHHHHHHHcCCCCccHhhhcccccCCceEEEEE
Confidence            356778889999999999999 4677889999998754322 22222222233445567888888888888889999999


Q ss_pred             ecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeeccCCCCCcccCCe
Q 018699          127 YLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSGPWQDQGL  206 (351)
Q Consensus       127 ~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~~~~~~~~~~~  206 (351)
                      |+++++|.+++..     ..+++..+..++.|++.|+.|||++|++|+||+|+||+++                 .++.+
T Consensus        83 ~~~~~~L~~~~~~-----~~~~~~~~~~~~~~i~~~l~~lH~~~ivH~dl~p~ni~i~-----------------~~~~~  140 (277)
T cd06642          83 YLGGGSALDLLKP-----GPLEETYIATILREILKGLDYLHSERKIHRDIKAANVLLS-----------------EQGDV  140 (277)
T ss_pred             ccCCCcHHHHhhc-----CCCCHHHHHHHHHHHHHHHHHHhcCCeeccCCChheEEEe-----------------CCCCE
Confidence            9999999998864     5688999999999999999999999999999999999998                 67779


Q ss_pred             EEeecCCccccccCCCCccccccccCCCcccceeccCCCCCccchHhHHHHHHHHHHhCccccccccCCCCCcee-eecC
Q 018699          207 CLVDWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQEKKPWKFQVDTYGLCAIVHMMLHNSYMEIEKKASPDGGLV-YLPK  285 (351)
Q Consensus       207 ~l~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~p~~~~~~~~~~~~~-~~~~  285 (351)
                      +|+|||++.....  .........++..|+|||.+.+..++.++|+|||||++|+|++|..|+....+....... ....
T Consensus       141 ~l~dfg~~~~~~~--~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~  218 (277)
T cd06642         141 KLADFGVAGQLTD--TQIKRNTFVGTPFWMAPEVIKQSAYDFKADIWSLGITAIELAKGEPPNSDLHPMRVLFLIPKNSP  218 (277)
T ss_pred             EEccccccccccC--cchhhhcccCcccccCHHHhCcCCCchhhhHHHHHHHHHHHHhCCCCCcccchhhHHhhhhcCCC
Confidence            9999998864331  112223345788999999998888899999999999999999999998654332111000 0111


Q ss_pred             cchhhhhHHHHHHHHHHHHhcCCCCCChHHHHHHHHHHHHHHhhChHHHHHHHHHHH
Q 018699          286 LSFKRYWKVELWKSLFTNLLNMSSGNDKEVLQNLQKSFQDYLCSNPQLLKNLKELLA  342 (351)
Q Consensus       286 ~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~~~~~~~~~~~~~~~~~~~~~~~  342 (351)
                      ...+...+ ..+.++|.+||..+|++||++.+++.|+|...+..++..+.++.+..+
T Consensus       219 ~~~~~~~~-~~~~~li~~~l~~~p~~Rp~~~~il~~~~~~~~~~~~~~~~~~~~~~~  274 (277)
T cd06642         219 PTLEGQYS-KPFKEFVEACLNKDPRFRPTAKELLKHKFITRYTKKTSFLTELIDRYK  274 (277)
T ss_pred             CCCCcccC-HHHHHHHHHHccCCcccCcCHHHHHHhHHHHHHhhhHHHHHHHHHHhh
Confidence            12222233 678999999999999999999999999987777777777777766653

Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25

>cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin

Probab=100.00  E-value=2.2e-38  Score=282.63  Aligned_cols=256  Identities=20%  Similarity=0.254  Sum_probs=191.8

Q ss_pred             cCeeEEEEEEeeccCceEEEEEEecCCCCceEEEEecCCCCChHHHHHHHHHhhhccc-cccccccceeee-----cccC
Q 018699           46 GGKKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFPWEFYMYRQLDQRISGR-ERSSFGFAHRIH-----LYSD  119 (351)
Q Consensus        46 ~~~~Y~i~~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~~~e~~~~~~~~~~~~~~-~~~~~~~~~~~~-----~~~~  119 (351)
                      ..++|++.+.||+|++|.||+|. +..+++.+|+|++............++. ..... .|+++.......     ..++
T Consensus        16 ~~~~~~~~~~lg~g~~~~vy~~~-~~~~~~~~~ik~~~~~~~~~~~~~~e~~-~l~~l~~h~~i~~~~~~~~~~~~~~~~   93 (286)
T cd06638          16 PSDTWEIIETIGKGTYGKVFKVL-NKKNGSKAAVKILDPIHDIDEEIEAEYN-ILKALSDHPNVVKFYGMYYKKDVKNGD   93 (286)
T ss_pred             cccceeeeeeeccCCCcEEEEEE-ECCCCceeEEEeeccccchHHHHHHHHH-HHHHHhcCCCeeeeeeeeeecccCCCC
Confidence            35789999999999999999999 5677899999997654322222222222 12222 466777766654     2356


Q ss_pred             eeEEEEEecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeeccCCCC
Q 018699          120 YSILVCDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSG  199 (351)
Q Consensus       120 ~~~lv~e~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~~~~  199 (351)
                      ..++||||+++++|.+++......+..+++..++.++.|++.|+.|||+++++|+||+|+||+++               
T Consensus        94 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nili~---------------  158 (286)
T cd06638          94 QLWLVLELCNGGSVTDLVKGFLKRGERMEEPIIAYILHEALMGLQHLHVNKTIHRDVKGNNILLT---------------  158 (286)
T ss_pred             eEEEEEeecCCCCHHHHHHHhhccCccccHHHHHHHHHHHHHHHHHHHhCCccccCCCHHhEEEC---------------
Confidence            78999999999999998865432245788999999999999999999999999999999999999               


Q ss_pred             CcccCCeEEeecCCccccccCCCCccccccccCCCcccceecc-----CCCCCccchHhHHHHHHHHHHhCccccccccC
Q 018699          200 PWQDQGLCLVDWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQE-----KKPWKFQVDTYGLCAIVHMMLHNSYMEIEKKA  274 (351)
Q Consensus       200 ~~~~~~~~l~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~-----~~~~~~~~DiwslG~il~~l~~g~~p~~~~~~  274 (351)
                        .++.++|+|||++.....  .........|++.|+|||.+.     +..++.++||||+||++|+|++|..||.....
T Consensus       159 --~~~~~kl~dfg~~~~~~~--~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvi~~el~~g~~p~~~~~~  234 (286)
T cd06638         159 --TEGGVKLVDFGVSAQLTS--TRLRRNTSVGTPFWMAPEVIACEQQLDSTYDARCDVWSLGITAIELGDGDPPLADLHP  234 (286)
T ss_pred             --CCCCEEEccCCceeeccc--CCCccccccCCCcccChhhhchhhhccccccchhhhhhHHHHHHHHhcCCCCCCCCch
Confidence              677799999998864321  112223346889999999874     34578899999999999999999999875443


Q ss_pred             CCCC-ce--eeecCcchhhhhHHHHHHHHHHHHhcCCCCCChHHHHHHHHHH
Q 018699          275 SPDG-GL--VYLPKLSFKRYWKVELWKSLFTNLLNMSSGNDKEVLQNLQKSF  323 (351)
Q Consensus       275 ~~~~-~~--~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~~~~  323 (351)
                      .... ..  ...+....+..++ ..+.+||.+||..||++||++.+++.|+|
T Consensus       235 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~li~~~l~~~p~~Rps~~ell~~~~  285 (286)
T cd06638         235 MRALFKIPRNPPPTLHQPELWS-NEFNDFIRKCLTKDYEKRPTVSDLLQHVF  285 (286)
T ss_pred             hHHHhhccccCCCcccCCCCcC-HHHHHHHHHHccCCcccCCCHHHHhhccc
Confidence            2110 00  0111222333344 67999999999999999999999999986

Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear

>cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4

Probab=100.00  E-value=7e-39  Score=281.20  Aligned_cols=252  Identities=15%  Similarity=0.134  Sum_probs=191.4

Q ss_pred             eEEEEEEeeccCceEEEEEEecCCCCceEEEEecCCCCCh--HHHHHHHHHhhhccccccccccceeeec-ccCeeEEEE
Q 018699           49 KYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFPW--EFYMYRQLDQRISGRERSSFGFAHRIHL-YSDYSILVC  125 (351)
Q Consensus        49 ~Y~i~~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~~~--e~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~lv~  125 (351)
                      .|++.+.||.|++|.||.|. +..+++.||+|.+......  ................++++........ ..+.+|++|
T Consensus         1 ~y~~~~~lg~g~~~~v~~~~-~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~lv~   79 (257)
T cd08223           1 AYCFVRVVGKGSYGEVSLVR-HRTDGKQYVIKKLNLRNASRRERKAAEQEAQLLSQLKHPNIVAYRESWEGEDGLLYIVM   79 (257)
T ss_pred             CceEEEEecCCCCeEEEEEE-EcCCCcEEEEEEEehhhcCHHHHHHHHHHHHHHHhCCCCCeeeeeeeecCCCCEEEEEe
Confidence            49999999999999999999 4667889999998654322  2222222223344445666666555443 345789999


Q ss_pred             EecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeeccCCCCCcccCC
Q 018699          126 DYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSGPWQDQG  205 (351)
Q Consensus       126 e~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~~~~~~~~~~  205 (351)
                      ||+++++|.+++....  +..+++.+++.++.|++.|+.+||+.|++|+||+|+||+++                 .++.
T Consensus        80 e~~~~~~l~~~l~~~~--~~~l~~~~~~~~~~~l~~~l~~lH~~~i~H~di~p~nil~~-----------------~~~~  140 (257)
T cd08223          80 GFCEGGDLYHKLKEQK--GKLLPENQVVEWFVQIAMALQYLHEKHILHRDLKTQNVFLT-----------------RTNI  140 (257)
T ss_pred             cccCCCcHHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCchhEEEe-----------------cCCc
Confidence            9999999999987642  45689999999999999999999999999999999999998                 6778


Q ss_pred             eEEeecCCccccccCCCCccccccccCCCcccceeccCCCCCccchHhHHHHHHHHHHhCccccccccCCCCC-ceeeec
Q 018699          206 LCLVDWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQEKKPWKFQVDTYGLCAIVHMMLHNSYMEIEKKASPDG-GLVYLP  284 (351)
Q Consensus       206 ~~l~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~p~~~~~~~~~~-~~~~~~  284 (351)
                      ++|+|||.+......  ........+++.|+|||.+.+..++.++|+||+|+++++|++|..||......... ......
T Consensus       141 ~~l~df~~~~~~~~~--~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~~~~~~~~~~~~~~~  218 (257)
T cd08223         141 IKVGDLGIARVLENQ--CDMASTLIGTPYYMSPELFSNKPYNYKSDVWALGCCVYEMATLKHAFNAKDMNSLVYRIIEGK  218 (257)
T ss_pred             EEEecccceEEeccc--CCccccccCCcCccChhHhcCCCCCchhhhHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhcC
Confidence            999999988643211  12233456788999999999888899999999999999999999998643321100 000011


Q ss_pred             CcchhhhhHHHHHHHHHHHHhcCCCCCChHHHHHHHHHH
Q 018699          285 KLSFKRYWKVELWKSLFTNLLNMSSGNDKEVLQNLQKSF  323 (351)
Q Consensus       285 ~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~~~~  323 (351)
                      ....+...+ +.+.++|.+||++||++||++.++++|||
T Consensus       219 ~~~~~~~~~-~~~~~li~~~l~~~p~~Rp~~~~~l~~~~  256 (257)
T cd08223         219 LPPMPKDYS-PELGELIATMLSKRPEKRPSVKSILRQPY  256 (257)
T ss_pred             CCCCccccC-HHHHHHHHHHhccCcccCCCHHHHhcCCC
Confidence            112223334 78999999999999999999999999986

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown.

>KOG0604 consensus MAP kinase-activated protein kinase 2 [Signal transduction mechanisms]

Probab=100.00  E-value=5.5e-40  Score=275.66  Aligned_cols=254  Identities=17%  Similarity=0.211  Sum_probs=203.1

Q ss_pred             eeEEEE-EEeeccCceEEEEEEecCCCCceEEEEecCCCCChHHHHHHHHHhhhccccccccccceeeecc----cCeeE
Q 018699           48 KKYQIK-GCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFPWEFYMYRQLDQRISGRERSSFGFAHRIHLY----SDYSI  122 (351)
Q Consensus        48 ~~Y~i~-~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~  122 (351)
                      ++|.+. ++||-|-.|.|-.|. ++.+|+.+|+|++.....    ..+++...-....+++++.+.+++..    ...+.
T Consensus        61 edY~is~qvLG~GinGkV~~C~-~k~T~ekfALKvL~Ds~K----ARrEVeLHw~~s~h~~iV~IidVyeNs~~~rkcLL  135 (400)
T KOG0604|consen   61 EDYSISWQVLGAGINGKVVQCV-HKRTQEKFALKVLLDSPK----ARREVELHWMASGHPHIVSIIDVYENSYQGRKCLL  135 (400)
T ss_pred             hhheehhhhhccccCCceEEEE-eccchhhhHHHHHhcCHH----HHhHhhhhhhhcCCCceEEeehhhhhhccCceeeE
Confidence            567764 679999999999999 678899999999875432    22333333345667788888877643    46778


Q ss_pred             EEEEecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeeccCCCCCcc
Q 018699          123 LVCDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSGPWQ  202 (351)
Q Consensus       123 lv~e~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~~~~~~~  202 (351)
                      +|||.++||.|...++.+.  ...+++.++..|++||..|+.|||+.+|+||||||+|++.....              .
T Consensus       136 iVmE~meGGeLfsriq~~g--~~afTErea~eI~~qI~~Av~~lH~~nIAHRDlKpENLLyt~t~--------------~  199 (400)
T KOG0604|consen  136 IVMECMEGGELFSRIQDRG--DQAFTEREASEIMKQIGLAVRYLHSMNIAHRDLKPENLLYTTTS--------------P  199 (400)
T ss_pred             eeeecccchHHHHHHHHcc--cccchHHHHHHHHHHHHHHHHHHHhcchhhccCChhheeeecCC--------------C
Confidence            9999999999999999865  46799999999999999999999999999999999999998544              5


Q ss_pred             cCCeEEeecCCccccccCCCCccccccccCCCcccceeccCCCCCccchHhHHHHHHHHHHhCccccccccCCCC----C
Q 018699          203 DQGLCLVDWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQEKKPWKFQVDTYGLCAIVHMMLHNSYMEIEKKASPD----G  278 (351)
Q Consensus       203 ~~~~~l~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~p~~~~~~~~~----~  278 (351)
                      +..+||+|||+|....   ......+.+-||.|.|||++....|+..+|+||+||++|-|++|.+||.......-    .
T Consensus       200 na~lKLtDfGFAK~t~---~~~~L~TPc~TPyYvaPevlg~eKydkscdmwSlgVimYIlLCGyPPFYS~hg~aispgMk  276 (400)
T KOG0604|consen  200 NAPLKLTDFGFAKETQ---EPGDLMTPCFTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMK  276 (400)
T ss_pred             CcceEecccccccccC---CCccccCCcccccccCHHHhCchhcCCCCCccchhHHHHHhhcCCCcccccCCccCChhHH
Confidence            6779999999997533   23445667889999999999998999999999999999999999999987654310    0


Q ss_pred             ceeeecCcchh-hhhHH--HHHHHHHHHHhcCCCCCChHHHHHHHHHHHH
Q 018699          279 GLVYLPKLSFK-RYWKV--ELWKSLFTNLLNMSSGNDKEVLQNLQKSFQD  325 (351)
Q Consensus       279 ~~~~~~~~~~~-~~~~~--~~~~~li~~~L~~dP~~R~s~~e~l~~~~~~  325 (351)
                      ..+......+| ..|+.  +..+++|+++|..+|.+|.|+.+.+.|||.+
T Consensus       277 ~rI~~gqy~FP~pEWs~VSe~aKdlIR~LLkt~PteRlTI~~~m~hpwi~  326 (400)
T KOG0604|consen  277 RRIRTGQYEFPEPEWSCVSEAAKDLIRKLLKTEPTERLTIEEVMDHPWIN  326 (400)
T ss_pred             hHhhccCccCCChhHhHHHHHHHHHHHHHhcCCchhheeHHHhhcCchhc
Confidence            11122222333 22432  8899999999999999999999999999844

>cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase

Probab=100.00  E-value=1.9e-38  Score=286.12  Aligned_cols=253  Identities=14%  Similarity=0.113  Sum_probs=195.1

Q ss_pred             eeEEEEEEeeccCceEEEEEEecCCCCceEEEEecCCCCChHH-HHHHHHHhhhccccccccccceeeecccCeeEEEEE
Q 018699           48 KKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFPWEF-YMYRQLDQRISGRERSSFGFAHRIHLYSDYSILVCD  126 (351)
Q Consensus        48 ~~Y~i~~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~~~e~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e  126 (351)
                      ++|++.+.||+|+||.||+|. +..++..+|+|.+......+. ..............|++++.....+..++.+++|||
T Consensus         1 ~~~~~~~~lg~G~~g~v~~~~-~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e   79 (308)
T cd06615           1 DDFEKLGELGAGNGGVVTKVL-HRPSGLIMARKLIHLEIKPAIRNQIIRELKVLHECNSPYIVGFYGAFYSDGEISICME   79 (308)
T ss_pred             CCceEEeeccCCCCeEEEEEE-EcCCCeEEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCEEEEEee
Confidence            369999999999999999999 567788999999875533221 112122223344567888888888888999999999


Q ss_pred             ecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHH-CCceecCCCCCcEEEeecCCcceeeccCCCCCcccCC
Q 018699          127 YLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHD-VGIIHGDFKPDNLLIRYARDELTVLDHDRSGPWQDQG  205 (351)
Q Consensus       127 ~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~-~~i~H~dl~p~Nill~~~~~~~~~~~~~~~~~~~~~~  205 (351)
                      |+++++|.+++..    ...+++..+..++.|++.|+.|||+ .+++|+||+|+||+++                 .++.
T Consensus        80 y~~~~~L~~~l~~----~~~~~~~~~~~~~~~i~~~l~~lH~~~~i~H~dl~p~nil~~-----------------~~~~  138 (308)
T cd06615          80 HMDGGSLDQVLKK----AGRIPENILGKISIAVLRGLTYLREKHKIMHRDVKPSNILVN-----------------SRGE  138 (308)
T ss_pred             ccCCCcHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHhhCCEEECCCChHHEEEe-----------------cCCc
Confidence            9999999999987    4678999999999999999999998 5999999999999999                 6777


Q ss_pred             eEEeecCCccccccCCCCccccccccCCCcccceeccCCCCCccchHhHHHHHHHHHHhCccccccccCCCCCc------
Q 018699          206 LCLVDWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQEKKPWKFQVDTYGLCAIVHMMLHNSYMEIEKKASPDGG------  279 (351)
Q Consensus       206 ~~l~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~p~~~~~~~~~~~------  279 (351)
                      ++|+|||.+....    ........++..|+|||.+.+..++.++|+|||||++|+|++|..||..........      
T Consensus       139 ~~l~dfg~~~~~~----~~~~~~~~~~~~~~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~  214 (308)
T cd06615         139 IKLCDFGVSGQLI----DSMANSFVGTRSYMSPERLQGTHYTVQSDIWSLGLSLVEMAIGRYPIPPPDAKELEAMFGRPV  214 (308)
T ss_pred             EEEccCCCccccc----ccccccCCCCcCccChhHhcCCCCCccchHHHHHHHHHHHHhCCCCCCCcchhhHHHhhcCcc
Confidence            9999999875432    112234567899999999988888999999999999999999999985332110000      


Q ss_pred             --eee-----------------------------ecCcchhh-hhHHHHHHHHHHHHhcCCCCCChHHHHHHHHHHHHHH
Q 018699          280 --LVY-----------------------------LPKLSFKR-YWKVELWKSLFTNLLNMSSGNDKEVLQNLQKSFQDYL  327 (351)
Q Consensus       280 --~~~-----------------------------~~~~~~~~-~~~~~~~~~li~~~L~~dP~~R~s~~e~l~~~~~~~~  327 (351)
                        ...                             ...+..+. .++ ..+++||.+||..||++||++.+++.|+|....
T Consensus       215 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~li~~~l~~~P~~Rpt~~~ll~~~~~~~~  293 (308)
T cd06615         215 SEGEAKESHRPVSGHPPDSPRPMAIFELLDYIVNEPPPKLPSGAFS-DEFQDFVDKCLKKNPKERADLKELTKHPFIKRA  293 (308)
T ss_pred             ccccccCCcccccCCCCCccchhhHHHHHHHHhcCCCccCcCcccC-HHHHHHHHHHccCChhhCcCHHHHhcChhhhhc
Confidence              000                             00001110 122 678999999999999999999999999876543

Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down

>PHA03209 serine/threonine kinase US3; Provisional

Probab=100.00  E-value=1.4e-38  Score=292.58  Aligned_cols=248  Identities=17%  Similarity=0.161  Sum_probs=187.9

Q ss_pred             EcCeeEEEEEEeeccCceEEEEEEecCCCCceEEEEecCCCCC-hHHHHHHHHHhhhccccccccccceeeecccCeeEE
Q 018699           45 IGGKKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFP-WEFYMYRQLDQRISGRERSSFGFAHRIHLYSDYSIL  123 (351)
Q Consensus        45 i~~~~Y~i~~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~~-~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  123 (351)
                      +....|++.+.||+|+||.||+|+ +..+++.||+|+...... .|..+       +....|++++.+...+..++..++
T Consensus        63 ~~~~~y~~~~~lg~G~~g~Vy~~~-~~~~~~~valK~~~~~~~~~E~~~-------l~~l~h~~iv~~~~~~~~~~~~~l  134 (357)
T PHA03209         63 VASLGYTVIKTLTPGSEGRVFVAT-KPGQPDPVVLKIGQKGTTLIEAML-------LQNVNHPSVIRMKDTLVSGAITCM  134 (357)
T ss_pred             hhhcCcEEEEEecCCCCeEEEEEE-ECCCCceEEEEeCCccccHHHHHH-------HHhCCCCCCcChhheEEeCCeeEE
Confidence            344679999999999999999999 567788999998654322 22222       233457788888888888889999


Q ss_pred             EEEecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeeccCCCCCccc
Q 018699          124 VCDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSGPWQD  203 (351)
Q Consensus       124 v~e~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~~~~~~~~  203 (351)
                      |||++ .++|.+++...   ...+++..+..++.||+.||.|||++||+||||||+||+++                 ..
T Consensus       135 v~e~~-~~~l~~~l~~~---~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~Nill~-----------------~~  193 (357)
T PHA03209        135 VLPHY-SSDLYTYLTKR---SRPLPIDQALIIEKQILEGLRYLHAQRIIHRDVKTENIFIN-----------------DV  193 (357)
T ss_pred             EEEcc-CCcHHHHHHhc---cCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEC-----------------CC
Confidence            99999 56888888654   46789999999999999999999999999999999999999                 67


Q ss_pred             CCeEEeecCCccccccCCCCccccccccCCCcccceeccCCCCCccchHhHHHHHHHHHHhCccccccccCCCC------
Q 018699          204 QGLCLVDWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQEKKPWKFQVDTYGLCAIVHMMLHNSYMEIEKKASPD------  277 (351)
Q Consensus       204 ~~~~l~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~p~~~~~~~~~------  277 (351)
                      +.++|+|||++....   .........||+.|+|||++.+..++.++|||||||++|+|+++..|+........      
T Consensus       194 ~~~kl~DfG~a~~~~---~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvvl~ell~~~~~~f~~~~~~~~~~~~~  270 (357)
T PHA03209        194 DQVCIGDLGAAQFPV---VAPAFLGLAGTVETNAPEVLARDKYNSKADIWSAGIVLFEMLAYPSTIFEDPPSTPEEYVKS  270 (357)
T ss_pred             CCEEEecCccccccc---cCcccccccccccccCCeecCCCCCCchhhHHHHHHHHHHHHHcCCccccCCCCcHHHHHHH
Confidence            789999999885322   11222345689999999999998899999999999999999987655432211100      


Q ss_pred             ------------C----ceeeecC---------------cchhh-------hhHHHHHHHHHHHHhcCCCCCChHHHHHH
Q 018699          278 ------------G----GLVYLPK---------------LSFKR-------YWKVELWKSLFTNLLNMSSGNDKEVLQNL  319 (351)
Q Consensus       278 ------------~----~~~~~~~---------------~~~~~-------~~~~~~~~~li~~~L~~dP~~R~s~~e~l  319 (351)
                                  +    .+...+.               .+...       ..+ ..+.+||.+||+.||.+|||+.|+|
T Consensus       271 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~li~~mL~~dP~~Rpta~e~l  349 (357)
T PHA03209        271 CHSHLLKIISTLKVHPEEFPRDPGSRLVRGFIEYASLERQPYTRYPCFQRVNLP-IDGEFLVHKMLTFDAAMRPSAEEIL  349 (357)
T ss_pred             HHHHHHHHHHHhccChhhcCCCCccHHHHHHHhhcccCCCcccccHHHhccCCC-chHHHHHHHHHcCCcccCcCHHHHh
Confidence                        0    0000000               00000       011 4567799999999999999999999


Q ss_pred             HHHHHH
Q 018699          320 QKSFQD  325 (351)
Q Consensus       320 ~~~~~~  325 (351)
                      +|||..
T Consensus       350 ~hp~f~  355 (357)
T PHA03209        350 NYPMFA  355 (357)
T ss_pred             cCchhc
Confidence            999753

>cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit

Probab=100.00  E-value=5.2e-39  Score=297.23  Aligned_cols=260  Identities=13%  Similarity=0.100  Sum_probs=190.7

Q ss_pred             EEEcCeeEEEEEEeeccCceEEEEEEe----cCCCCceEEEEecCCCCCh-HH-HHHHHHHhhhccc-cccccccceeee
Q 018699           43 IEIGGKKYQIKGCAGQGGFAKVFKAYV----NGDPEDVVALKIQKPAFPW-EF-YMYRQLDQRISGR-ERSSFGFAHRIH  115 (351)
Q Consensus        43 ~~i~~~~Y~i~~~lg~G~~g~V~~a~~----~~~~~~~vaiK~~~~~~~~-e~-~~~~~~~~~~~~~-~~~~~~~~~~~~  115 (351)
                      ..+..++|++.+.||+|+||+||+|.+    +..++..||+|++...... +. ...+++. .+... .|++++.....+
T Consensus        30 ~~~~~~~~~~~~~LG~G~fG~V~~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~Ei~-il~~l~~HpnIv~l~~~~  108 (375)
T cd05104          30 WEFPRNRLSFGKTLGAGAFGKVVEATAYGLFKSDAAMTVAVKMLKPSAHLTEREALMSELK-VLSYLGNHINIVNLLGAC  108 (375)
T ss_pred             cccchHHeehhheecCCccceEEEEEEeccccCccceeEEEEeccCCcCcHHHHHHHHHHH-HHHHhcCCcceeeeeeee
Confidence            345567899999999999999999974    2355678999998754321 11 2222222 22223 688888888888


Q ss_pred             cccCeeEEEEEecCCCCHHHHHHHHHh-----------------------------------------------------
Q 018699          116 LYSDYSILVCDYLSQGTLQDAINSYVV-----------------------------------------------------  142 (351)
Q Consensus       116 ~~~~~~~lv~e~~~~~sL~~~l~~~~~-----------------------------------------------------  142 (351)
                      ..++..++||||+++|+|.+++.....                                                     
T Consensus       109 ~~~~~~~lv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~  188 (375)
T cd05104         109 TVGGPTLVITEYCCYGDLLNFLRRKRDSFICPKHEDHAEAALYKNLLHQREMSCDSLNEYMDMKPGVSYVVPTKADKRRS  188 (375)
T ss_pred             ccCCcceeeehhccCCcHHHHHHhcccccccccccchhhhHHHHhhhhhhcccchhhhhhhhcCCCcccccccccccccc
Confidence            888899999999999999999865310                                                     


Q ss_pred             ------------------hCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeeccCCCCCcccC
Q 018699          143 ------------------IGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSGPWQDQ  204 (351)
Q Consensus       143 ------------------~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~~~~~~~~~  204 (351)
                                        .+..+++..+..++.||+.|+.|||++||+||||||+||+++                 .++
T Consensus       189 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~Nill~-----------------~~~  251 (375)
T cd05104         189 VRSGSYIDQDVTSEILEEDELALDTEDLLSFSYQVAKGMSFLASKNCIHRDLAARNILLT-----------------HGR  251 (375)
T ss_pred             cccceecccccHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCchhhEEEE-----------------CCC
Confidence                              012467888999999999999999999999999999999998                 667


Q ss_pred             CeEEeecCCccccccCCCCccccccccCCCcccceeccCCCCCccchHhHHHHHHHHHHh-CccccccccCCCC-Cceee
Q 018699          205 GLCLVDWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQEKKPWKFQVDTYGLCAIVHMMLH-NSYMEIEKKASPD-GGLVY  282 (351)
Q Consensus       205 ~~~l~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~-g~~p~~~~~~~~~-~~~~~  282 (351)
                      .++|+|||++................++..|+|||.+.+..++.++|||||||++|+|++ |..||........ .....
T Consensus       252 ~~kl~DfG~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDi~slG~~l~ellt~g~~p~~~~~~~~~~~~~~~  331 (375)
T cd05104         252 ITKICDFGLARDIRNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLGSSPYPGMPVDSKFYKMIK  331 (375)
T ss_pred             cEEEecCccceeccCcccccccCCCCCCcceeChhHhcCCCCCCCCCHHHHHHHHHHHHhcCCCCCCCCCchHHHHHHHH
Confidence            799999999865432111111112234567999999999899999999999999999997 8888864322100 00000


Q ss_pred             -ecCcchhhhhHHHHHHHHHHHHhcCCCCCChHHHHHHHH
Q 018699          283 -LPKLSFKRYWKVELWKSLFTNLLNMSSGNDKEVLQNLQK  321 (351)
Q Consensus       283 -~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~~  321 (351)
                       ......+...+ ..+++||.+||+.||++||++.++++.
T Consensus       332 ~~~~~~~~~~~~-~~l~~li~~cl~~dP~~RPs~~eil~~  370 (375)
T cd05104         332 EGYRMLSPECAP-SEMYDIMKSCWDADPLKRPTFKQIVQL  370 (375)
T ss_pred             hCccCCCCCCCC-HHHHHHHHHHccCChhHCcCHHHHHHH
Confidence             00111122223 789999999999999999999999876

Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce

>cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=8.9e-39  Score=281.25  Aligned_cols=253  Identities=21%  Similarity=0.226  Sum_probs=198.6

Q ss_pred             CeeEEEEEEeeccCceEEEEEEecCCCCceEEEEecCCCCChHHHHHHHHHhhhccccccccccceeeecccCeeEEEEE
Q 018699           47 GKKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFPWEFYMYRQLDQRISGRERSSFGFAHRIHLYSDYSILVCD  126 (351)
Q Consensus        47 ~~~Y~i~~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e  126 (351)
                      .++|++.+.||.|++|.||+|. +..+++.+++|++..........+...........|+++.........++..|++||
T Consensus         2 ~~~~~~~~~l~~g~~~~v~~~~-~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~l~~e   80 (262)
T cd06613           2 QEDYELIQRIGSGTYGDVYKAR-DIATGELVAIKVIKLEPGDDFEIIQQEISMLKECRHPNIVAYFGSYLRRDKLWIVME   80 (262)
T ss_pred             ccceEEEEEecCCCceEEEEeE-ecCCCCEEEEEEEEcCchhhHHHHHHHHHHHHhCCCCChhceEEEEEeCCEEEEEEe
Confidence            3689999999999999999999 466778999999876544333333333344455678888888888888889999999


Q ss_pred             ecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeeccCCCCCcccCCe
Q 018699          127 YLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSGPWQDQGL  206 (351)
Q Consensus       127 ~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~~~~~~~~~~~  206 (351)
                      |+++++|.+++...   ...+++..+..++.|++.|+.|||++|++|+||+|+||+++                 .++.+
T Consensus        81 ~~~~~~l~~~~~~~---~~~l~~~~~~~~~~ql~~~l~~lh~~~i~h~dl~p~ni~i~-----------------~~~~~  140 (262)
T cd06613          81 YCGGGSLQDIYQVT---RGPLSELQIAYVCRETLKGLAYLHETGKIHRDIKGANILLT-----------------EDGDV  140 (262)
T ss_pred             CCCCCcHHHHHHhh---ccCCCHHHHHHHHHHHHHHHHHHHhCCceecCCChhhEEEC-----------------CCCCE
Confidence            99999999998774   36789999999999999999999999999999999999999                 67789


Q ss_pred             EEeecCCccccccCCCCccccccccCCCcccceeccCC---CCCccchHhHHHHHHHHHHhCccccccccCCCCC----c
Q 018699          207 CLVDWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQEKK---PWKFQVDTYGLCAIVHMMLHNSYMEIEKKASPDG----G  279 (351)
Q Consensus       207 ~l~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~---~~~~~~DiwslG~il~~l~~g~~p~~~~~~~~~~----~  279 (351)
                      +|+|||.+.....  .........++..|+|||.+.+.   .++.++|+||+|+++|+|++|..||.........    .
T Consensus       141 ~l~d~g~~~~~~~--~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~~~~Di~slG~~l~~~~tg~~p~~~~~~~~~~~~~~~  218 (262)
T cd06613         141 KLADFGVSAQLTA--TIAKRKSFIGTPYWMAPEVAAVERKGGYDGKCDIWALGITAIELAELQPPMFDLHPMRALFLISK  218 (262)
T ss_pred             EECccccchhhhh--hhhccccccCCccccCchhhcccccCCcCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHh
Confidence            9999998864321  11122344678889999998766   7889999999999999999999998754321100    0


Q ss_pred             ee-eecCcchhhhhHHHHHHHHHHHHhcCCCCCChHHHHHHHHHH
Q 018699          280 LV-YLPKLSFKRYWKVELWKSLFTNLLNMSSGNDKEVLQNLQKSF  323 (351)
Q Consensus       280 ~~-~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~~~~  323 (351)
                      .. .......+..++ ..+.+||.+||..+|..||++.+++.|+|
T Consensus       219 ~~~~~~~~~~~~~~~-~~~~~li~~~l~~~p~~Rpt~~~il~~~~  262 (262)
T cd06613         219 SNFPPPKLKDKEKWS-PVFHDFIKKCLTKDPKKRPTATKLLQHPF  262 (262)
T ss_pred             ccCCCccccchhhhh-HHHHHHHHHHcCCChhhCCCHHHHhcCCC
Confidence            00 011112233344 77999999999999999999999999875

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ

>cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5

Probab=100.00  E-value=9.8e-39  Score=284.85  Aligned_cols=252  Identities=19%  Similarity=0.220  Sum_probs=192.4

Q ss_pred             eEEEEEEeeccCceEEEEEEecCCCCceEEEEecCCCCChHH----HHHHHHHhhhccccccccccceeeecccCeeEEE
Q 018699           49 KYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFPWEF----YMYRQLDQRISGRERSSFGFAHRIHLYSDYSILV  124 (351)
Q Consensus        49 ~Y~i~~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~~~e~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv  124 (351)
                      .|+..+.||.|+||+||+|. +..+++.||+|.+........    ....++ ..+....+++++.....+..++..++|
T Consensus         1 ~~~~~~~lg~G~~g~vy~~~-~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~-~il~~l~~~~i~~~~~~~~~~~~~~lv   78 (285)
T cd05632           1 TFRQYRVLGKGGFGEVCACQ-VRATGKMYACKRLEKKRIKKRKGESMALNEK-QILEKVNSQFVVNLAYAYETKDALCLV   78 (285)
T ss_pred             CceEEEEEecCCCeEEEEEE-ECCCCcEEEEEEeehhhhhhhhHHHHHHHHH-HHHHHcCCcCceeEEEEEecCCEEEEE
Confidence            47889999999999999999 467789999999865422111    111111 223344566777777777778899999


Q ss_pred             EEecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeeccCCCCCcccC
Q 018699          125 CDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSGPWQDQ  204 (351)
Q Consensus       125 ~e~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~~~~~~~~~  204 (351)
                      |||+.+++|.+.+....  +..+++..+..++.|++.|+.|||+.||+|+||+|+||+++                 .++
T Consensus        79 ~e~~~~~~L~~~~~~~~--~~~~~~~~~~~~~~ql~~~l~~lH~~~iiH~dikp~Nili~-----------------~~~  139 (285)
T cd05632          79 LTIMNGGDLKFHIYNMG--NPGFEEERALFYAAEILCGLEDLHRENTVYRDLKPENILLD-----------------DYG  139 (285)
T ss_pred             EEeccCccHHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHhCCeeecCCCHHHEEEC-----------------CCC
Confidence            99999999998886532  34699999999999999999999999999999999999998                 677


Q ss_pred             CeEEeecCCccccccCCCCccccccccCCCcccceeccCCCCCccchHhHHHHHHHHHHhCccccccccCCCC----Cce
Q 018699          205 GLCLVDWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQEKKPWKFQVDTYGLCAIVHMMLHNSYMEIEKKASPD----GGL  280 (351)
Q Consensus       205 ~~~l~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~p~~~~~~~~~----~~~  280 (351)
                      .++|+|||++....   .........|+..|+|||.+.+..++.++|+||+||++|+|++|..||........    ...
T Consensus       140 ~~kl~Dfg~~~~~~---~~~~~~~~~g~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~P~~~~~~~~~~~~~~~~  216 (285)
T cd05632         140 HIRISDLGLAVKIP---EGESIRGRVGTVGYMAPEVLNNQRYTLSPDYWGLGCLIYEMIEGQSPFRGRKEKVKREEVDRR  216 (285)
T ss_pred             CEEEecCCcceecC---CCCcccCCCCCcCccChHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHh
Confidence            89999999885432   12223345689999999999888899999999999999999999999975432100    000


Q ss_pred             eeecCcchhhhhHHHHHHHHHHHHhcCCCCCChH-----HHHHHHHHHHH
Q 018699          281 VYLPKLSFKRYWKVELWKSLFTNLLNMSSGNDKE-----VLQNLQKSFQD  325 (351)
Q Consensus       281 ~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~s-----~~e~l~~~~~~  325 (351)
                      .......++...+ ..+.+|+.+||+.||.+||+     +.+++.|+|-.
T Consensus       217 ~~~~~~~~~~~~~-~~~~~li~~~l~~~P~~R~~~~~~~~~~l~~~~~~~  265 (285)
T cd05632         217 VLETEEVYSAKFS-EEAKSICKMLLTKDPKQRLGCQEEGAGEVKRHPFFR  265 (285)
T ss_pred             hhccccccCccCC-HHHHHHHHHHccCCHhHcCCCcccChHHHHcChhhh
Confidence            1111122233344 77899999999999999999     78888887543

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with

>cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6

Probab=100.00  E-value=7.7e-39  Score=285.02  Aligned_cols=256  Identities=16%  Similarity=0.159  Sum_probs=195.5

Q ss_pred             eeEEEEEEeeccCceEEEEEEecCCCCceEEEEecCCCCC--hHHHHHHHHHhhhccccccccccceeeecccCeeEEEE
Q 018699           48 KKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFP--WEFYMYRQLDQRISGRERSSFGFAHRIHLYSDYSILVC  125 (351)
Q Consensus        48 ~~Y~i~~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~~--~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~  125 (351)
                      ++|++.+.||+|+||.||+|. +..+|+.||+|.+.....  .+...+.++........+++++........++..|++|
T Consensus         1 ~~~~~~~~ig~g~~g~v~~~~-~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~~~~iv~~~~~~~~~~~~~lv~   79 (283)
T cd06617           1 DDLEVIEELGRGAYGVVDKMR-HVPTGTIMAVKRIRATVNSQEQKRLLMDLDISMRSVDCPYTVTFYGALFREGDVWICM   79 (283)
T ss_pred             CCceEEEEecccCCeEEEEEE-EcCCCcEEEEEEEecCCCcHHHHHHHHHHHHHHHHcCCCCeeeeeEEEecCCcEEEEh
Confidence            479999999999999999999 567799999999876533  23344444444444566788888877777788899999


Q ss_pred             EecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHC-CceecCCCCCcEEEeecCCcceeeccCCCCCcccC
Q 018699          126 DYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDV-GIIHGDFKPDNLLIRYARDELTVLDHDRSGPWQDQ  204 (351)
Q Consensus       126 e~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~-~i~H~dl~p~Nill~~~~~~~~~~~~~~~~~~~~~  204 (351)
                      ||+ .++|.+++......+..+++..++.++.|++.|+.|||++ +++|+||+|+||+++                 .++
T Consensus        80 e~~-~~~l~~~l~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~~i~h~dlkp~nil~~-----------------~~~  141 (283)
T cd06617          80 EVM-DTSLDKFYKKVYDKGLTIPEDILGKIAVSIVKALEYLHSKLSVIHRDVKPSNVLIN-----------------RNG  141 (283)
T ss_pred             hhh-cccHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhhcCCeecCCCCHHHEEEC-----------------CCC
Confidence            999 5789888876443356789999999999999999999998 999999999999999                 677


Q ss_pred             CeEEeecCCccccccCCCCccccccccCCCcccceeccC----CCCCccchHhHHHHHHHHHHhCccccccccCCCC--C
Q 018699          205 GLCLVDWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQEK----KPWKFQVDTYGLCAIVHMMLHNSYMEIEKKASPD--G  278 (351)
Q Consensus       205 ~~~l~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~----~~~~~~~DiwslG~il~~l~~g~~p~~~~~~~~~--~  278 (351)
                      .++|+|||.+....   .........++..|+|||.+.+    ..++.++|+||+||++|+|++|..||........  .
T Consensus       142 ~~kl~dfg~~~~~~---~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~  218 (283)
T cd06617         142 QVKLCDFGISGYLV---DSVAKTIDAGCKPYMAPERINPELNQKGYDVKSDVWSLGITMIELATGRFPYDSWKTPFQQLK  218 (283)
T ss_pred             CEEEeecccccccc---cccccccccCCccccChhhcCCcccccccCccccchhhHHHHHHHHhCCCCCCccccCHHHHH
Confidence            89999999886432   1112223457888999998854    4567899999999999999999999864321100  0


Q ss_pred             ceeeecCcchh-hhhHHHHHHHHHHHHhcCCCCCChHHHHHHHHHHHHH
Q 018699          279 GLVYLPKLSFK-RYWKVELWKSLFTNLLNMSSGNDKEVLQNLQKSFQDY  326 (351)
Q Consensus       279 ~~~~~~~~~~~-~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~~~~~~~  326 (351)
                      ..........+ ..++ ..+.++|.+||..+|++||++.+++.|+|...
T Consensus       219 ~~~~~~~~~~~~~~~~-~~l~~li~~~l~~~p~~Rp~~~~il~~~~~~~  266 (283)
T cd06617         219 QVVEEPSPQLPAEKFS-PEFQDFVNKCLKKNYKERPNYPELLQHPFFEL  266 (283)
T ss_pred             HHHhcCCCCCCccccC-HHHHHHHHHHccCChhhCcCHHHHhcCchhhh
Confidence            00011111222 1233 78999999999999999999999999886544

Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs

>cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase

Probab=100.00  E-value=3.5e-39  Score=285.55  Aligned_cols=254  Identities=17%  Similarity=0.207  Sum_probs=190.8

Q ss_pred             CeeEEEEEEeeccCceEEEEEEecCCCCceEEEEecCCCCChHHHHHHHHHhhhccccccccccceeeecc------cCe
Q 018699           47 GKKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFPWEFYMYRQLDQRISGRERSSFGFAHRIHLY------SDY  120 (351)
Q Consensus        47 ~~~Y~i~~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~  120 (351)
                      .+.|++.+.||.|+||.||+|. ...+++.||+|.+......+.....++........|+++......+..      ...
T Consensus         5 ~~~y~~~~~lg~g~~g~vy~~~-~~~~~~~~aik~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~~~   83 (272)
T cd06637           5 AGIFELVELVGNGTYGQVYKGR-HVKTGQLAAIKVMDVTGDEEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGMDDQ   83 (272)
T ss_pred             hhhhhHHHheeecCCeEEEEEE-EcCCCcEEEEEEEEcCCccHHHHHHHHHHHHHhcCCCCeeeEeeEEeecCCCCCCcE
Confidence            5689999999999999999999 567789999999875543333333333222222346777776665532      246


Q ss_pred             eEEEEEecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeeccCCCCC
Q 018699          121 SILVCDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSGP  200 (351)
Q Consensus       121 ~~lv~e~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~~~~~  200 (351)
                      .|++|||+.+++|.+++....  +..+++..+..++.|++.|++|||+++|+|+||+|+||+++                
T Consensus        84 ~~iv~e~~~~~~L~~~l~~~~--~~~l~~~~~~~~~~qi~~~l~~LH~~~ivh~dl~~~nili~----------------  145 (272)
T cd06637          84 LWLVMEFCGAGSVTDLIKNTK--GNTLKEEWIAYICREILRGLSHLHQHKVIHRDIKGQNVLLT----------------  145 (272)
T ss_pred             EEEEEEcCCCCcHHHHHHhcc--CCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCHHHEEEC----------------
Confidence            899999999999999987632  35689999999999999999999999999999999999999                


Q ss_pred             cccCCeEEeecCCccccccCCCCccccccccCCCcccceecc-----CCCCCccchHhHHHHHHHHHHhCccccccccCC
Q 018699          201 WQDQGLCLVDWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQE-----KKPWKFQVDTYGLCAIVHMMLHNSYMEIEKKAS  275 (351)
Q Consensus       201 ~~~~~~~l~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~-----~~~~~~~~DiwslG~il~~l~~g~~p~~~~~~~  275 (351)
                       .++.++|+|||++......  ........|+..|+|||++.     +..++.++|+||+||++|+|++|..||......
T Consensus       146 -~~~~~~l~Dfg~~~~~~~~--~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGv~l~el~~g~~p~~~~~~~  222 (272)
T cd06637         146 -ENAEVKLVDFGVSAQLDRT--VGRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPM  222 (272)
T ss_pred             -CCCCEEEccCCCceecccc--cccCCcccccccccCHhHhccccCcCCCCCchhhHHHHHHHHHHHHhCCCCccccCHH
Confidence             6778999999998643211  12233456888999999985     345788999999999999999999998643322


Q ss_pred             CCCceee--ecCcchhhhhHHHHHHHHHHHHhcCCCCCChHHHHHHHHHH
Q 018699          276 PDGGLVY--LPKLSFKRYWKVELWKSLFTNLLNMSSGNDKEVLQNLQKSF  323 (351)
Q Consensus       276 ~~~~~~~--~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~~~~  323 (351)
                      .......  ......+..++ ..+.+||.+||..||.+||++.+++.|||
T Consensus       223 ~~~~~~~~~~~~~~~~~~~~-~~~~~li~~~l~~~p~~Rpt~~~il~~~~  271 (272)
T cd06637         223 RALFLIPRNPAPRLKSKKWS-KKFQSFIESCLVKNHSQRPTTEQLMKHPF  271 (272)
T ss_pred             HHHHHHhcCCCCCCCCCCcC-HHHHHHHHHHcCCChhhCCCHHHHhhCCC
Confidence            1100000  01111112233 78999999999999999999999999986

Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ

>cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10

Probab=100.00  E-value=8.4e-39  Score=282.44  Aligned_cols=253  Identities=11%  Similarity=0.087  Sum_probs=191.3

Q ss_pred             EcCeeEEEEEEeeccCceEEEEEEec--CCCCceEEEEecCCCCChH-H-HHHHHHHhhhccccccccccceeeecccCe
Q 018699           45 IGGKKYQIKGCAGQGGFAKVFKAYVN--GDPEDVVALKIQKPAFPWE-F-YMYRQLDQRISGRERSSFGFAHRIHLYSDY  120 (351)
Q Consensus        45 i~~~~Y~i~~~lg~G~~g~V~~a~~~--~~~~~~vaiK~~~~~~~~e-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  120 (351)
                      +..++|++.+.||+|+||.||+|.+.  ...+..||+|.+....... . ..+.++ .......|++++....+...++.
T Consensus         2 i~~~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~e~-~~l~~l~h~~iv~~~~~~~~~~~   80 (266)
T cd05064           2 LDNKSIKIERILGTGRFGELCRGCLKLPSKRELPVAIHTLRAGCSDKQRRGFLAEA-LTLGQFDHSNIVRLEGVITRGNT   80 (266)
T ss_pred             CchHHeEEeeeecccCCCeEEEEEEecCCCceeeEEEEecCCCCCHHHHHHHHHHH-HHHhcCCCCCcCeEEEEEecCCC
Confidence            45678999999999999999999853  3456799999987653322 1 222222 33344578889888888888889


Q ss_pred             eEEEEEecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeeccCCCCC
Q 018699          121 SILVCDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSGP  200 (351)
Q Consensus       121 ~~lv~e~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~~~~~  200 (351)
                      .++||||+++++|.+++...   ...+++..++.++.|++.|++|||++|++|+||+|+||+++                
T Consensus        81 ~~lv~e~~~~~~L~~~l~~~---~~~l~~~~~~~~~~~i~~al~~lH~~~iiH~dikp~nili~----------------  141 (266)
T cd05064          81 MMIVTEYMSNGALDSFLRKH---EGQLVAGQLMGMLPGLASGMKYLSEMGYVHKGLAAHKVLVN----------------  141 (266)
T ss_pred             cEEEEEeCCCCcHHHHHHhC---CCCCCHHHHHHHHHHHHHHHHHHHHCCEeeccccHhhEEEc----------------
Confidence            99999999999999998764   35789999999999999999999999999999999999998                


Q ss_pred             cccCCeEEeecCCccccccCCCCccccccccCCCcccceeccCCCCCccchHhHHHHHHHHHHh-CccccccccCCCCCc
Q 018699          201 WQDQGLCLVDWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQEKKPWKFQVDTYGLCAIVHMMLH-NSYMEIEKKASPDGG  279 (351)
Q Consensus       201 ~~~~~~~l~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~-g~~p~~~~~~~~~~~  279 (351)
                       .++.++++|||.+....... ........++..|+|||.+.+..++.++||||+||++|++++ |..||..........
T Consensus       142 -~~~~~~l~dfg~~~~~~~~~-~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~p~~~~~~~~~~~  219 (266)
T cd05064         142 -SDLVCKISGFRRLQEDKSEA-IYTTMSGKSPVLWAAPEAIQYHHFSSASDVWSFGIVMWEVMSYGERPYWDMSGQDVIK  219 (266)
T ss_pred             -CCCcEEECCCcccccccccc-hhcccCCCCceeecCHHHHhhCCccchhHHHHHHHHHHHHhcCCCCCcCcCCHHHHHH
Confidence             67789999999765321110 011112234568999999988889999999999999999775 999986543221000


Q ss_pred             e-eeecCcchhhhhHHHHHHHHHHHHhcCCCCCChHHHHHHH
Q 018699          280 L-VYLPKLSFKRYWKVELWKSLFTNLLNMSSGNDKEVLQNLQ  320 (351)
Q Consensus       280 ~-~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~  320 (351)
                      . ......+.+..++ ..+.+++.+||+++|.+||++.++++
T Consensus       220 ~~~~~~~~~~~~~~~-~~~~~li~~c~~~~p~~RP~~~~i~~  260 (266)
T cd05064         220 AVEDGFRLPAPRNCP-NLLHQLMLDCWQKERGERPRFSQIHS  260 (266)
T ss_pred             HHHCCCCCCCCCCCC-HHHHHHHHHHcCCCchhCCCHHHHHH
Confidence            0 0001112233344 78899999999999999999999876

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor

>cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=9.3e-39  Score=289.19  Aligned_cols=256  Identities=19%  Similarity=0.200  Sum_probs=196.9

Q ss_pred             eeEEEEEEeeccCceEEEEEEecCCCCceEEEEecCCCCChH---HHHHHHHHhhhccccccccccceeeecccCeeEEE
Q 018699           48 KKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFPWE---FYMYRQLDQRISGRERSSFGFAHRIHLYSDYSILV  124 (351)
Q Consensus        48 ~~Y~i~~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~~~e---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv  124 (351)
                      ++|++.+.||+|++|+||+|. +..+++.||+|.+.......   ...+......+....+++++.+......++..|+|
T Consensus         1 ~~y~~~~~ig~g~~g~vy~~~-~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv   79 (316)
T cd05574           1 KHFKKIKLLGKGDVGRVFLVR-LKGTGKLFALKVLDKKEMIKRNKVKRVLTEQEILATLDHPFLPTLYASFQTETYLCLV   79 (316)
T ss_pred             CceEEeeeecCCccEEEEEEE-EcCCCcEEEEEEEeccccchHHHHHHHHHHHHHHHhCCCCCchhheeeeecCCEEEEE
Confidence            479999999999999999999 56678999999987654432   22222223344455678888888888888899999


Q ss_pred             EEecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeeccCCCCCcccC
Q 018699          125 CDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSGPWQDQ  204 (351)
Q Consensus       125 ~e~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~~~~~~~~~  204 (351)
                      |||+.+++|.+++....  +..+++..++.++.|++.||+|||+.|++|+||+|+||+++                 .++
T Consensus        80 ~e~~~~~~L~~~~~~~~--~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nili~-----------------~~~  140 (316)
T cd05574          80 MDYCPGGELFRLLQRQP--GKCLSEEVARFYAAEVLLALEYLHLLGIVYRDLKPENILLH-----------------ESG  140 (316)
T ss_pred             EEecCCCCHHHHHHhCC--CCccCHHHHHHHHHHHHHHHHHHHHCCeeccCCChHHeEEc-----------------CCC
Confidence            99999999999987532  45789999999999999999999999999999999999999                 677


Q ss_pred             CeEEeecCCccccccCCC---------------------------CccccccccCCCcccceeccCCCCCccchHhHHHH
Q 018699          205 GLCLVDWGRGIDLHLFPD---------------------------NMEFEGDCRTSGFRCIEMQEKKPWKFQVDTYGLCA  257 (351)
Q Consensus       205 ~~~l~Dfg~a~~~~~~~~---------------------------~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~  257 (351)
                      .++|+|||++........                           ........|+..|+|||.+.+..++.++||||||+
T Consensus       141 ~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Di~slG~  220 (316)
T cd05574         141 HIMLSDFDLSKQSDVEPPPVSKALRKGSRRSSVNSIPSETFSEEPSFRSNSFVGTEEYIAPEVISGDGHGSAVDWWTLGI  220 (316)
T ss_pred             CEEEeecchhhcccccccccccccccccccccccccchhhhcccccCCCCCCcCccCCcCHHHHcCCCCCchHHHHHHHH
Confidence            899999998754321110                           00112346788999999998888899999999999


Q ss_pred             HHHHHHhCccccccccCCCCCceeeecCcchhhh--hHHHHHHHHHHHHhcCCCCCChH----HHHHHHHHHH
Q 018699          258 IVHMMLHNSYMEIEKKASPDGGLVYLPKLSFKRY--WKVELWKSLFTNLLNMSSGNDKE----VLQNLQKSFQ  324 (351)
Q Consensus       258 il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~li~~~L~~dP~~R~s----~~e~l~~~~~  324 (351)
                      ++|+|++|..||...................+..  .+ +.++++|.+||..||++||+    +++++.|+|.
T Consensus       221 ll~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~li~~~l~~~p~~R~s~~~~~~~ll~~~~~  292 (316)
T cd05574         221 LLYEMLYGTTPFKGSNRDETFSNILKKEVTFPGSPPVS-SSARDLIRKLLVKDPSKRLGSKRGAAEIKQHPFF  292 (316)
T ss_pred             HHHHHhhCCCCCCCCchHHHHHHHhcCCccCCCccccC-HHHHHHHHHHccCCHhHCCCchhhHHHHHcCchh
Confidence            9999999999996544321100001111111111  23 78999999999999999999    9999999764

Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin

>cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=9.6e-39  Score=282.83  Aligned_cols=256  Identities=18%  Similarity=0.188  Sum_probs=193.7

Q ss_pred             CeeEEEEEEeeccCceEEEEEEecCCCCceEEEEecCCCCChHHHHHHHHHhhhccccccccccceeeecc------cCe
Q 018699           47 GKKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFPWEFYMYRQLDQRISGRERSSFGFAHRIHLY------SDY  120 (351)
Q Consensus        47 ~~~Y~i~~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~  120 (351)
                      .++|++.+.||.|++|+||+|. +..+++.+++|++............++........|+++......+..      +..
T Consensus         5 ~~~y~~~~~l~~g~~~~v~~~~-~~~~~~~~~~k~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~~~   83 (275)
T cd06608           5 TGIFELVEVIGEGTYGKVYKAR-HKKTGQLVAIKIMDIIEDEEEEIKEEYNILRKYSNHPNIATFYGAFIKKNPPGNDDQ   83 (275)
T ss_pred             hhheeheeeecCCCCeEEEEEE-ECCCCcEEEEEEEecCchhHHHHHHHHHHHHHhcCCCChheEEEEEEecCCCCcceE
Confidence            5799999999999999999999 466788999999876544333333333222222356777777766643      345


Q ss_pred             eEEEEEecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeeccCCCCC
Q 018699          121 SILVCDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSGP  200 (351)
Q Consensus       121 ~~lv~e~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~~~~~  200 (351)
                      .++||||+++++|.+++......+..+++..++.++.|++.|+.|||++|++|+||+|+||+++                
T Consensus        84 ~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lH~~~i~H~~l~p~ni~~~----------------  147 (275)
T cd06608          84 LWLVMELCGGGSVTDLVKGLRKKGKRLKEEWIAYILRETLRGLAYLHENKVIHRDIKGQNILLT----------------  147 (275)
T ss_pred             EEEEEEcCCCCcHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhcCCcccCCCCHHHEEEc----------------
Confidence            8999999999999999877543356889999999999999999999999999999999999999                


Q ss_pred             cccCCeEEeecCCccccccCCCCccccccccCCCcccceeccC-----CCCCccchHhHHHHHHHHHHhCccccccccCC
Q 018699          201 WQDQGLCLVDWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQEK-----KPWKFQVDTYGLCAIVHMMLHNSYMEIEKKAS  275 (351)
Q Consensus       201 ~~~~~~~l~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~-----~~~~~~~DiwslG~il~~l~~g~~p~~~~~~~  275 (351)
                       .++.++|+|||++.....  .........++..|+|||.+..     ..++.++|||||||++|+|++|..||......
T Consensus       148 -~~~~~~l~d~~~~~~~~~--~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~  224 (275)
T cd06608         148 -KNAEVKLVDFGVSAQLDS--TLGRRNTFIGTPYWMAPEVIACDEQPDASYDARSDVWSLGITAIELADGKPPLCDMHPM  224 (275)
T ss_pred             -cCCeEEECCCccceeccc--chhhhcCccccccccCHhHhcccccccCCccccccHHHhHHHHHHHHhCCCCccccchH
Confidence             677799999998864321  1122234457889999998743     34678899999999999999999999743321


Q ss_pred             CC-Ccee--eecCcchhhhhHHHHHHHHHHHHhcCCCCCChHHHHHHHHHH
Q 018699          276 PD-GGLV--YLPKLSFKRYWKVELWKSLFTNLLNMSSGNDKEVLQNLQKSF  323 (351)
Q Consensus       276 ~~-~~~~--~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~~~~  323 (351)
                      .. ....  ..+....+..++ ..+++||.+||..||++||++.+++.|||
T Consensus       225 ~~~~~~~~~~~~~~~~~~~~~-~~~~~li~~~l~~dp~~Rpt~~~ll~~~~  274 (275)
T cd06608         225 RALFKIPRNPPPTLKSPENWS-KKFNDFISECLIKNYEQRPFMEELLEHPF  274 (275)
T ss_pred             HHHHHhhccCCCCCCchhhcC-HHHHHHHHHHhhcChhhCcCHHHHhcCCC
Confidence            10 0000  011222233355 78999999999999999999999999986

Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I

>cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4

Probab=100.00  E-value=2.1e-38  Score=281.56  Aligned_cols=263  Identities=17%  Similarity=0.158  Sum_probs=203.0

Q ss_pred             eeEEEEEEeeccCceEEEEEEecCCCCceEEEEecCCCCC-hHHHHHHHHHhhhccccccccccceeeecccCeeEEEEE
Q 018699           48 KKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFP-WEFYMYRQLDQRISGRERSSFGFAHRIHLYSDYSILVCD  126 (351)
Q Consensus        48 ~~Y~i~~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~~-~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e  126 (351)
                      ..|+..+.||.|++|.||.|. +..++..||+|++..... .+...+......+....|++++........++..++|||
T Consensus         4 ~~y~~~~~lg~g~~~~vy~~~-~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e   82 (277)
T cd06640           4 ELFTKLERIGKGSFGEVFKGI-DNRTQQVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKGTKLWIIME   82 (277)
T ss_pred             HhhhhhhhcccCCCeEEEEEE-EccCCEEEEEEEEeccccHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCEEEEEEe
Confidence            468899999999999999999 466789999999875432 222222323334445567888888888888899999999


Q ss_pred             ecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeeccCCCCCcccCCe
Q 018699          127 YLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSGPWQDQGL  206 (351)
Q Consensus       127 ~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~~~~~~~~~~~  206 (351)
                      |+++++|.+++..     .++++..+..++.|++.|+.+||+.+++|+||+|+||+++                 .++.+
T Consensus        83 ~~~~~~L~~~i~~-----~~l~~~~~~~~~~~l~~~l~~lh~~~ivH~dl~p~Nil~~-----------------~~~~~  140 (277)
T cd06640          83 YLGGGSALDLLRA-----GPFDEFQIATMLKEILKGLDYLHSEKKIHRDIKAANVLLS-----------------EQGDV  140 (277)
T ss_pred             cCCCCcHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHhCCccCcCCChhhEEEc-----------------CCCCE
Confidence            9999999998864     4688899999999999999999999999999999999999                 67779


Q ss_pred             EEeecCCccccccCCCCccccccccCCCcccceeccCCCCCccchHhHHHHHHHHHHhCccccccccCCCCCcee-eecC
Q 018699          207 CLVDWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQEKKPWKFQVDTYGLCAIVHMMLHNSYMEIEKKASPDGGLV-YLPK  285 (351)
Q Consensus       207 ~l~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~p~~~~~~~~~~~~~-~~~~  285 (351)
                      +|+|||++.....  .........++..|+|||.+.+..++.++|+|||||++|+|++|..||............ ....
T Consensus       141 ~l~dfg~~~~~~~--~~~~~~~~~~~~~y~apE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~  218 (277)
T cd06640         141 KLADFGVAGQLTD--TQIKRNTFVGTPFWMAPEVIQQSAYDSKADIWSLGITAIELAKGEPPNSDMHPMRVLFLIPKNNP  218 (277)
T ss_pred             EEcccccceeccC--CccccccccCcccccCHhHhccCCCccHHHHHHHHHHHHHHHHCCCCCCCcChHhHhhhhhcCCC
Confidence            9999998864321  111223345788899999998888899999999999999999999998754432111110 1112


Q ss_pred             cchhhhhHHHHHHHHHHHHhcCCCCCChHHHHHHHHHHHHHHhhChHHHHH
Q 018699          286 LSFKRYWKVELWKSLFTNLLNMSSGNDKEVLQNLQKSFQDYLCSNPQLLKN  336 (351)
Q Consensus       286 ~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~~~~~~~~~~~~~~~~~  336 (351)
                      ...+...+ ..+.++|.+||..+|++||++.+++.|+|.........++..
T Consensus       219 ~~~~~~~~-~~~~~li~~~l~~~p~~Rp~~~~il~~~~~~~~~~~~~~~~~  268 (277)
T cd06640         219 PTLTGEFS-KPFKEFIDACLNKDPSFRPTAKELLKHKFIVKNAKKTSYLTE  268 (277)
T ss_pred             CCCchhhh-HHHHHHHHHHcccCcccCcCHHHHHhChHhhhcchhhhHHHH
Confidence            22333344 778999999999999999999999999886655555444443

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter

>cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains

Probab=100.00  E-value=1.3e-38  Score=279.31  Aligned_cols=252  Identities=17%  Similarity=0.136  Sum_probs=196.5

Q ss_pred             eEEEEEEeeccCceEEEEEEecCCCCceEEEEecCCCCCh--HHHHHHHHHhhhccccccccccceeeecccCeeEEEEE
Q 018699           49 KYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFPW--EFYMYRQLDQRISGRERSSFGFAHRIHLYSDYSILVCD  126 (351)
Q Consensus        49 ~Y~i~~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~~~--e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e  126 (351)
                      .|++.+.||+|++|.||+|. ...+++.|++|.+......  +..........+....|+++..........+..++|||
T Consensus         1 ~~~~~~~l~~g~~~~v~~~~-~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e   79 (256)
T cd08529           1 DFEILNKIGKGSFGVVFKVV-RKADKRVYAMKQIDLSKMNRREREEAIDEARVLAKLDSSYIIRYYESFLDKGKLNIVME   79 (256)
T ss_pred             CceEeEEecCCCCeEEEEEE-EcCCCcEEEEEEeehhhCCHHHHHHHHHHHHHHHhcCCCCeehheeeeccCCEEEEEEE
Confidence            48899999999999999999 5677899999987643222  12222222233455678888888888888889999999


Q ss_pred             ecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeeccCCCCCcccCCe
Q 018699          127 YLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSGPWQDQGL  206 (351)
Q Consensus       127 ~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~~~~~~~~~~~  206 (351)
                      |+++++|.+++....  +..+++..++.++.|++.|+.|||+.|++|+||+|+||+++                 .++.+
T Consensus        80 ~~~~~~L~~~l~~~~--~~~~~~~~~~~i~~~l~~al~~lH~~~i~h~dl~~~nili~-----------------~~~~~  140 (256)
T cd08529          80 YAENGDLHKLLKMQR--GRPLPEDQVWRFFIQILLGLAHLHSKKILHRDIKSLNLFLD-----------------AYDNV  140 (256)
T ss_pred             eCCCCcHHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCcceEEEe-----------------CCCCE
Confidence            999999999998742  46789999999999999999999999999999999999999                 67789


Q ss_pred             EEeecCCccccccCCCCccccccccCCCcccceeccCCCCCccchHhHHHHHHHHHHhCccccccccCCCCC-ceeeecC
Q 018699          207 CLVDWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQEKKPWKFQVDTYGLCAIVHMMLHNSYMEIEKKASPDG-GLVYLPK  285 (351)
Q Consensus       207 ~l~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~p~~~~~~~~~~-~~~~~~~  285 (351)
                      +|+|||.+.....  .........+++.|+|||...+..++.++|+|||||++++|++|..||......... .......
T Consensus       141 ~l~df~~~~~~~~--~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~  218 (256)
T cd08529         141 KIGDLGVAKLLSD--NTNFANTIVGTPYYLSPELCEDKPYNEKSDVWALGVVLYECCTGKHPFDANNQGALILKIIRGVF  218 (256)
T ss_pred             EEcccccceeccC--ccchhhccccCccccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCC
Confidence            9999998864332  122233446788999999998888899999999999999999999998754421100 0001111


Q ss_pred             cchhhhhHHHHHHHHHHHHhcCCCCCChHHHHHHHHHH
Q 018699          286 LSFKRYWKVELWKSLFTNLLNMSSGNDKEVLQNLQKSF  323 (351)
Q Consensus       286 ~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~~~~  323 (351)
                      ...+...+ ..+.++|.+||+.+|++||++.++++|+|
T Consensus       219 ~~~~~~~~-~~~~~~i~~~l~~~p~~Rp~~~~ll~~~~  255 (256)
T cd08529         219 PPVSQMYS-QQLAQLIDQCLTKDYRQRPDTFQLLRNPS  255 (256)
T ss_pred             CCCccccC-HHHHHHHHHHccCCcccCcCHHHHhhCCC
Confidence            22222333 78999999999999999999999999875

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc

>cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7

Probab=100.00  E-value=1.2e-38  Score=283.07  Aligned_cols=246  Identities=18%  Similarity=0.215  Sum_probs=183.6

Q ss_pred             eeccCceEEEEEEecCCCCceEEEEecCCCCCh---HHHHHHHHHhhhccccccccccceeeecccCeeEEEEEecCCCC
Q 018699           56 AGQGGFAKVFKAYVNGDPEDVVALKIQKPAFPW---EFYMYRQLDQRISGRERSSFGFAHRIHLYSDYSILVCDYLSQGT  132 (351)
Q Consensus        56 lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~~~---e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~s  132 (351)
                      ||+|+||+||+|+ ...+|+.||+|.+......   ...........+....++++......+..+...|+||||++|++
T Consensus         1 lg~G~~g~Vy~~~-~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~il~~l~hp~i~~~~~~~~~~~~~~lv~e~~~g~~   79 (277)
T cd05607           1 LGKGGFGEVCAVQ-VKNTGKMYACKKLDKKRLKKKSGEKMALLEKEILEKVNSPFIVNLAYAFESKTHLCLVMSLMNGGD   79 (277)
T ss_pred             CCCCCceEEEEEE-EccCCcEEEEEEEcHHHhhcchhhHHHHHHHHHHHhcCCCcEEEEEEEEecCCeEEEEEecCCCCC
Confidence            7999999999999 5677899999988643211   11111111223344567788887777778889999999999999


Q ss_pred             HHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeeccCCCCCcccCCeEEeecC
Q 018699          133 LQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSGPWQDQGLCLVDWG  212 (351)
Q Consensus       133 L~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~~~~~~~~~~~~l~Dfg  212 (351)
                      |.+++....  ...+++..+..++.|++.|++|||+.||+|+||+|+||+++                 .++.++|+|||
T Consensus        80 L~~~~~~~~--~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dikp~Nili~-----------------~~~~~~l~Dfg  140 (277)
T cd05607          80 LKYHIYNVG--ERGLEMERVIHYSAQITCGILHLHSMDIVYRDMKPENVLLD-----------------DQGNCRLSDLG  140 (277)
T ss_pred             HHHHHHhcc--ccCCCHHHHHHHHHHHHHHHHHHHHCCEEEccCChHhEEEc-----------------CCCCEEEeece
Confidence            998886532  34588899999999999999999999999999999999999                 67789999999


Q ss_pred             CccccccCCCCccccccccCCCcccceeccCCCCCccchHhHHHHHHHHHHhCccccccccCCCCC-ce---eeecCcch
Q 018699          213 RGIDLHLFPDNMEFEGDCRTSGFRCIEMQEKKPWKFQVDTYGLCAIVHMMLHNSYMEIEKKASPDG-GL---VYLPKLSF  288 (351)
Q Consensus       213 ~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~p~~~~~~~~~~-~~---~~~~~~~~  288 (351)
                      ++....   .........|+..|+|||++.+..++.++||||+||++|+|++|..||......... ..   ........
T Consensus       141 ~~~~~~---~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~  217 (277)
T cd05607         141 LAVELK---DGKTITQRAGTNGYMAPEILKEEPYSYPVDWFAMGCSIYEMVAGRTPFKDHKEKVAKEELKRRTLEDEVKF  217 (277)
T ss_pred             eeeecC---CCceeeccCCCCCccCHHHHccCCCCCchhHHHHHHHHHHHHhCCCCCCCCcchhhHHHHHHHhhcccccc
Confidence            886432   122223456889999999998888999999999999999999999998653321000 00   00001111


Q ss_pred             -hhhhHHHHHHHHHHHHhcCCCCCChHH----HHHHHHHHHH
Q 018699          289 -KRYWKVELWKSLFTNLLNMSSGNDKEV----LQNLQKSFQD  325 (351)
Q Consensus       289 -~~~~~~~~~~~li~~~L~~dP~~R~s~----~e~l~~~~~~  325 (351)
                       ....+ +.+++||.+||++||.+||++    .+++.|+|..
T Consensus       218 ~~~~~~-~~~~~li~~~L~~~P~~R~~~~~~~~~~~~h~~f~  258 (277)
T cd05607         218 EHQNFT-EESKDICRLFLAKKPEDRLGSREKNDDPRKHEFFK  258 (277)
T ss_pred             ccccCC-HHHHHHHHHHhccCHhhCCCCccchhhhhcChhhc
Confidence             11233 788999999999999999999    4555666543

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr

>cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5

Probab=100.00  E-value=1.7e-38  Score=282.50  Aligned_cols=251  Identities=14%  Similarity=0.123  Sum_probs=192.9

Q ss_pred             eeEEEEEEeeccCceEEEEEEecCCCCceEEEEecCCCCChH-HHHHHHHHhhhccccccccccceeeecccCeeEEEEE
Q 018699           48 KKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFPWE-FYMYRQLDQRISGRERSSFGFAHRIHLYSDYSILVCD  126 (351)
Q Consensus        48 ~~Y~i~~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~~~e-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e  126 (351)
                      ++|++.+.||+|++|.||+|. +..+++.||+|.+......+ ...+...........++++......+...+..++|||
T Consensus         1 ~~~~~~~~lg~g~~~~v~~~~-~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e   79 (279)
T cd06619           1 QDIQYQEILGHGNGGTVYKAY-HLLTRRILAVKVIPLDITVELQKQIMSELEILYKCDSPYIIGFYGAFFVENRISICTE   79 (279)
T ss_pred             CcchheeeeccCCCeEEEEEE-EcCCCcEEEEEEEecCCChHHHHHHHHHHHHHHhCCCCCeeeEEEEEEECCEEEEEEe
Confidence            368999999999999999999 56778999999987553222 1112222223344567888888888888889999999


Q ss_pred             ecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeeccCCCCCcccCCe
Q 018699          127 YLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSGPWQDQGL  206 (351)
Q Consensus       127 ~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~~~~~~~~~~~  206 (351)
                      |+++++|..+        ..+++..+..++.|++.|+.|||+.||+|+||+|+||+++                 .++.+
T Consensus        80 ~~~~~~l~~~--------~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nill~-----------------~~~~~  134 (279)
T cd06619          80 FMDGGSLDVY--------RKIPEHVLGRIAVAVVKGLTYLWSLKILHRDVKPSNMLVN-----------------TRGQV  134 (279)
T ss_pred             cCCCCChHHh--------hcCCHHHHHHHHHHHHHHHHHHHHCCEeeCCCCHHHEEEC-----------------CCCCE
Confidence            9999998653        2467888899999999999999999999999999999999                 77889


Q ss_pred             EEeecCCccccccCCCCccccccccCCCcccceeccCCCCCccchHhHHHHHHHHHHhCccccccccCCCCCcee-----
Q 018699          207 CLVDWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQEKKPWKFQVDTYGLCAIVHMMLHNSYMEIEKKASPDGGLV-----  281 (351)
Q Consensus       207 ~l~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~p~~~~~~~~~~~~~-----  281 (351)
                      +|+|||++....    ........++..|+|||.+.+..++.++|+|||||++|+|++|..||............     
T Consensus       135 ~l~dfg~~~~~~----~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~  210 (279)
T cd06619         135 KLCDFGVSTQLV----NSIAKTYVGTNAYMAPERISGEQYGIHSDVWSLGISFMELALGRFPYPQIQKNQGSLMPLQLLQ  210 (279)
T ss_pred             EEeeCCcceecc----cccccCCCCChhhcCceeecCCCCCCcchHHHHHHHHHHHHhCCCCchhhcccccccchHHHHH
Confidence            999999886432    12233457899999999999888999999999999999999999998653322110000     


Q ss_pred             ---eecCcchhh-hhHHHHHHHHHHHHhcCCCCCChHHHHHHHHHHHHHHhh
Q 018699          282 ---YLPKLSFKR-YWKVELWKSLFTNLLNMSSGNDKEVLQNLQKSFQDYLCS  329 (351)
Q Consensus       282 ---~~~~~~~~~-~~~~~~~~~li~~~L~~dP~~R~s~~e~l~~~~~~~~~~  329 (351)
                         .......+. ..+ ..+++||.+||..||++||++.+++.|+|......
T Consensus       211 ~~~~~~~~~~~~~~~~-~~~~~li~~~l~~~P~~Rp~~~eil~~~~~~~~~~  261 (279)
T cd06619         211 CIVDEDPPVLPVGQFS-EKFVHFITQCMRKQPKERPAPENLMDHPFIVQYND  261 (279)
T ss_pred             HHhccCCCCCCCCcCC-HHHHHHHHHHhhCChhhCCCHHHHhcCcccccccC
Confidence               001111111 123 67999999999999999999999999987554433

Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p

>cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor

Probab=100.00  E-value=8.2e-39  Score=295.67  Aligned_cols=262  Identities=13%  Similarity=0.046  Sum_probs=191.5

Q ss_pred             EEEEcCeeEEEEEEeeccCceEEEEEEec----CCCCceEEEEecCCCCChH-HHHHHHHHhhhccc-cccccccceeee
Q 018699           42 TIEIGGKKYQIKGCAGQGGFAKVFKAYVN----GDPEDVVALKIQKPAFPWE-FYMYRQLDQRISGR-ERSSFGFAHRIH  115 (351)
Q Consensus        42 ~~~i~~~~Y~i~~~lg~G~~g~V~~a~~~----~~~~~~vaiK~~~~~~~~e-~~~~~~~~~~~~~~-~~~~~~~~~~~~  115 (351)
                      .+.+..++|++.+.||+|+||.||+|++.    ..++..||+|.+......+ ...+......+... .|++++.....+
T Consensus        32 ~~~~~~~~~~~~~~LG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~~h~nIv~~~~~~  111 (374)
T cd05106          32 KWEFPRDNLQFGKTLGAGAFGKVVEATAFGLGKEDNVLRVAVKMLKASAHTDEREALMSELKILSHLGQHKNIVNLLGAC  111 (374)
T ss_pred             cccccHHHceehheecCCCcccEEEEEEecCCcccccceeEEEeccCCCCHHHHHHHHHHHHHHHhhccCCceeeEeeEe
Confidence            34566679999999999999999999852    2344689999987653322 11121112222233 678888888888


Q ss_pred             cccCeeEEEEEecCCCCHHHHHHHHHh-----------------------------------------------------
Q 018699          116 LYSDYSILVCDYLSQGTLQDAINSYVV-----------------------------------------------------  142 (351)
Q Consensus       116 ~~~~~~~lv~e~~~~~sL~~~l~~~~~-----------------------------------------------------  142 (351)
                      ...+..++||||+++|+|.+++.....                                                     
T Consensus       112 ~~~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  191 (374)
T cd05106         112 THGGPVLVITEYCCYGDLLNFLRKKAETFLNFVMALPEISETSSDYKNITLEKKYIRSDSGFSSQGSDTYVEMRPVSSSS  191 (374)
T ss_pred             cCCCCeEEeHhhccCCcHHHHHHhhhhhhccccccccccccccccccccchhcccccccccccccccccccccCCccccc
Confidence            888899999999999999999865321                                                     


Q ss_pred             -------------hCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeeccCCCCCcccCCeEEe
Q 018699          143 -------------IGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSGPWQDQGLCLV  209 (351)
Q Consensus       143 -------------~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~~~~~~~~~~~~l~  209 (351)
                                   ...++++..++.++.||+.||.|||++||+||||||+||+++                 .++.++|+
T Consensus       192 ~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~giiHrDLkp~Nil~~-----------------~~~~~kL~  254 (374)
T cd05106         192 SQSSDSKDEEDTEDSWPLDLDDLLRFSSQVAQGMDFLASKNCIHRDVAARNVLLT-----------------DGRVAKIC  254 (374)
T ss_pred             cccccccchhccCCCCCcCHHHHHHHHHHHHHHHHHHHHCCEEeccCchheEEEe-----------------CCCeEEEe
Confidence                         012478888999999999999999999999999999999998                 66779999


Q ss_pred             ecCCccccccCCCCccccccccCCCcccceeccCCCCCccchHhHHHHHHHHHHh-CccccccccCCCCC-cee-eecCc
Q 018699          210 DWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQEKKPWKFQVDTYGLCAIVHMMLH-NSYMEIEKKASPDG-GLV-YLPKL  286 (351)
Q Consensus       210 Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~-g~~p~~~~~~~~~~-~~~-~~~~~  286 (351)
                      |||++................++..|+|||++.+..++.++|||||||++|+|++ |..||......... ... .....
T Consensus       255 DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt~G~~Pf~~~~~~~~~~~~~~~~~~~  334 (374)
T cd05106         255 DFGLARDIMNDSNYVVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGKSPYPGILVNSKFYKMVKRGYQM  334 (374)
T ss_pred             eceeeeeccCCcceeeccCCCCccceeCHHHhcCCCCCccccHHHHHHHHHHHHhCCCCCCccccccHHHHHHHHcccCc
Confidence            9999864321111111112234567999999988889999999999999999997 99998654332100 000 00111


Q ss_pred             chhhhhHHHHHHHHHHHHhcCCCCCChHHHHHHHH
Q 018699          287 SFKRYWKVELWKSLFTNLLNMSSGNDKEVLQNLQK  321 (351)
Q Consensus       287 ~~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~~  321 (351)
                      ..+...+ ..+.++|.+||+.||.+||++.++++.
T Consensus       335 ~~~~~~~-~~l~~li~~cl~~dp~~RPs~~~l~~~  368 (374)
T cd05106         335 SRPDFAP-PEIYSIMKMCWNLEPTERPTFSQISQL  368 (374)
T ss_pred             cCCCCCC-HHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence            1222223 789999999999999999999998764

Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti

>KOG0197 consensus Tyrosine kinases [Signal transduction mechanisms]

Probab=100.00  E-value=2.8e-39  Score=291.90  Aligned_cols=261  Identities=14%  Similarity=0.136  Sum_probs=201.5

Q ss_pred             ceEEEEcCeeEEEEEEeeccCceEEEEEEecCCCCceEEEEecCCCCChHHHHHHHHHhhhccccccccccceeeecccC
Q 018699           40 NKTIEIGGKKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFPWEFYMYRQLDQRISGRERSSFGFAHRIHLYSD  119 (351)
Q Consensus        40 ~~~~~i~~~~Y~i~~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  119 (351)
                      ...+++..+.+.+.+.||+|-||.||.|+|+..  ..||+|.++.......... +.......+.|.+++....+...++
T Consensus       198 ~d~wei~r~~l~l~~~LG~G~FG~V~~g~~~~~--~~vavk~ik~~~m~~~~f~-~Ea~iMk~L~H~~lV~l~gV~~~~~  274 (468)
T KOG0197|consen  198 RDPWEIPREELKLIRELGSGQFGEVWLGKWNGS--TKVAVKTIKEGSMSPEAFL-REAQIMKKLRHEKLVKLYGVCTKQE  274 (468)
T ss_pred             cCCeeecHHHHHHHHHhcCCccceEEEEEEcCC--CcccceEEeccccChhHHH-HHHHHHHhCcccCeEEEEEEEecCC
Confidence            567788899999999999999999999998543  4599998876544332222 2223344566778999999998888


Q ss_pred             eeEEEEEecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeeccCCCC
Q 018699          120 YSILVCDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSG  199 (351)
Q Consensus       120 ~~~lv~e~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~~~~  199 (351)
                      .+||||||++.|+|.++++...  +..+.....+.++.||++|++||+++++|||||...|||++               
T Consensus       275 piyIVtE~m~~GsLl~yLr~~~--~~~l~~~~Ll~~a~qIaeGM~YLes~~~IHRDLAARNiLV~---------------  337 (468)
T KOG0197|consen  275 PIYIVTEYMPKGSLLDYLRTRE--GGLLNLPQLLDFAAQIAEGMAYLESKNYIHRDLAARNILVD---------------  337 (468)
T ss_pred             ceEEEEEecccCcHHHHhhhcC--CCccchHHHHHHHHHHHHHHHHHHhCCccchhhhhhheeec---------------
Confidence            8999999999999999999732  57889999999999999999999999999999999999999               


Q ss_pred             CcccCCeEEeecCCccccccCCCCcccccccc---CCCcccceeccCCCCCccchHhHHHHHHHHHHh-CccccccccCC
Q 018699          200 PWQDQGLCLVDWGRGIDLHLFPDNMEFEGDCR---TSGFRCIEMQEKKPWKFQVDTYGLCAIVHMMLH-NSYMEIEKKAS  275 (351)
Q Consensus       200 ~~~~~~~~l~Dfg~a~~~~~~~~~~~~~~~~g---~~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~-g~~p~~~~~~~  275 (351)
                        .+..+||+|||+|+...    +..+....|   ...|.|||.+....++.++||||+|++|+|++| |+.|+...+..
T Consensus       338 --~~~~vKIsDFGLAr~~~----d~~Y~~~~~~kfPIkWtAPEa~~~~~FS~kSDVWSFGVlL~E~fT~G~~py~~msn~  411 (468)
T KOG0197|consen  338 --EDLVVKISDFGLARLIG----DDEYTASEGGKFPIKWTAPEALNYGKFSSKSDVWSFGVLLWELFTYGRVPYPGMSNE  411 (468)
T ss_pred             --cCceEEEcccccccccC----CCceeecCCCCCCceecCHHHHhhCCcccccceeehhhhHHHHhccCCCCCCCCCHH
Confidence              77889999999998322    223322222   345999999999999999999999999999995 56676554432


Q ss_pred             CC-CceeeecCcchhhhhHHHHHHHHHHHHhcCCCCCChHHHHHHHHHHHHHHh
Q 018699          276 PD-GGLVYLPKLSFKRYWKVELWKSLFTNLLNMSSGNDKEVLQNLQKSFQDYLC  328 (351)
Q Consensus       276 ~~-~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~~~~~~~~~  328 (351)
                      .. ......-+.+-|..++ +.+-++|..||..+|++|||++ .|+..++++..
T Consensus       412 ev~~~le~GyRlp~P~~CP-~~vY~lM~~CW~~~P~~RPtF~-~L~~~l~~~~~  463 (468)
T KOG0197|consen  412 EVLELLERGYRLPRPEGCP-DEVYELMKSCWHEDPEDRPTFE-TLREVLEDFFT  463 (468)
T ss_pred             HHHHHHhccCcCCCCCCCC-HHHHHHHHHHhhCCcccCCCHH-HHHHHHHHhhh
Confidence            11 0111122233334444 7888999999999999999998 44555555544

>cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3

Probab=100.00  E-value=1.3e-38  Score=279.40  Aligned_cols=250  Identities=14%  Similarity=0.132  Sum_probs=194.1

Q ss_pred             eEEEEEEeeccCceEEEEEEecCCCCceEEEEecCCCCC-hHHHHHHHHHhhhccccccccccceeeecccCeeEEEEEe
Q 018699           49 KYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFP-WEFYMYRQLDQRISGRERSSFGFAHRIHLYSDYSILVCDY  127 (351)
Q Consensus        49 ~Y~i~~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~~-~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~  127 (351)
                      +|++.+.||.|++|.||++. +..+++.+|+|.+..... .................|+++......+..++.+|++|||
T Consensus         1 ~y~~~~~lg~g~~g~v~~~~-~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~   79 (255)
T cd08219           1 QYNVLRVVGEGSFGRALLVQ-HVNSDQKYAMKEIRLPKSSSAVEDSRKEAVLLAKMKHPNIVAFKESFEADGHLYIVMEY   79 (255)
T ss_pred             CceEEEEeeccCCeEEEEEE-EcCCCceEEEEEEEcCcchHHHHHHHHHHHHHHhCCCCCcceEEEEEEECCEEEEEEee
Confidence            58999999999999999999 567789999998754322 2222222222334455678888888888888999999999


Q ss_pred             cCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeeccCCCCCcccCCeE
Q 018699          128 LSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSGPWQDQGLC  207 (351)
Q Consensus       128 ~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~~~~~~~~~~~~  207 (351)
                      +++++|.+++....  +..+++..+..++.|++.|+.+||++||+|+||+|+||+++                 .++.++
T Consensus        80 ~~~~~l~~~~~~~~--~~~~~~~~~~~~~~~i~~al~~lH~~~i~H~dl~p~nili~-----------------~~~~~~  140 (255)
T cd08219          80 CDGGDLMQKIKLQR--GKLFPEDTILQWFVQMCLGVQHIHEKRVLHRDIKSKNIFLT-----------------QNGKVK  140 (255)
T ss_pred             CCCCcHHHHHHhcc--CCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCcceEEEC-----------------CCCcEE
Confidence            99999999886532  45689999999999999999999999999999999999998                 677899


Q ss_pred             EeecCCccccccCCCCccccccccCCCcccceeccCCCCCccchHhHHHHHHHHHHhCccccccccCCCCC-ceeeecCc
Q 018699          208 LVDWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQEKKPWKFQVDTYGLCAIVHMMLHNSYMEIEKKASPDG-GLVYLPKL  286 (351)
Q Consensus       208 l~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~p~~~~~~~~~~-~~~~~~~~  286 (351)
                      |+|||.+.....  .........+++.|+|||++.+..++.++|+||+|+++|+|++|..||......... ........
T Consensus       141 l~dfg~~~~~~~--~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~~~~~~~~~~~~~~  218 (255)
T cd08219         141 LGDFGSARLLTS--PGAYACTYVGTPYYVPPEIWENMPYNNKSDIWSLGCILYELCTLKHPFQANSWKNLILKVCQGSYK  218 (255)
T ss_pred             EcccCcceeecc--cccccccccCCccccCHHHHccCCcCchhhhhhhchhheehhhccCCCCCCCHHHHHHHHhcCCCC
Confidence            999998864321  112223356788999999998888999999999999999999999999754322100 00011122


Q ss_pred             chhhhhHHHHHHHHHHHHhcCCCCCChHHHHHHHH
Q 018699          287 SFKRYWKVELWKSLFTNLLNMSSGNDKEVLQNLQK  321 (351)
Q Consensus       287 ~~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~~  321 (351)
                      +.+..++ ..+.+||.+||+.||++||++.++++.
T Consensus       219 ~~~~~~~-~~~~~li~~~l~~~P~~Rp~~~~il~~  252 (255)
T cd08219         219 PLPSHYS-YELRSLIKQMFKRNPRSRPSATTILSR  252 (255)
T ss_pred             CCCcccC-HHHHHHHHHHHhCCcccCCCHHHHhhc
Confidence            2344455 778999999999999999999999864

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati

>cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase

Probab=100.00  E-value=7e-39  Score=285.30  Aligned_cols=259  Identities=19%  Similarity=0.216  Sum_probs=198.0

Q ss_pred             eEEEEEEeeccCceEEEEEEecCCCCceEEEEecCCCCChHHHHHHHHHhhhccccccccccceeeecccCeeEEEEEec
Q 018699           49 KYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFPWEFYMYRQLDQRISGRERSSFGFAHRIHLYSDYSILVCDYL  128 (351)
Q Consensus        49 ~Y~i~~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~  128 (351)
                      -|++.+.||.|+||.||+|. +..++..+++|.+......................|+++......+..++..++|+||+
T Consensus         6 ~~~i~~~lg~g~~g~v~~~~-~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~~~~~~v~e~~   84 (282)
T cd06643           6 FWEIIGELGDGAFGKVYKAQ-NKETGVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFC   84 (282)
T ss_pred             HHHHHhhcccCCCeEEEEEE-ECCCCeEEEEEEeCCCCHHHHHHHHHHHHHHHHCCCCCeeeEEEEEeeCCEEEEEEEec
Confidence            47889999999999999999 56778899999987554333222222223344556788888888888888999999999


Q ss_pred             CCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeeccCCCCCcccCCeEE
Q 018699          129 SQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSGPWQDQGLCL  208 (351)
Q Consensus       129 ~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~~~~~~~~~~~~l  208 (351)
                      ++++|..++...   ..++++..+..++.|++.||.|||+.|++|+||+|+||+++                 .++.++|
T Consensus        85 ~~~~l~~~~~~~---~~~l~~~~~~~~~~qi~~~L~~LH~~~i~H~dlkp~nili~-----------------~~~~~kl  144 (282)
T cd06643          85 AGGAVDAVMLEL---ERPLTEPQIRVVCKQTLEALNYLHENKIIHRDLKAGNILFT-----------------LDGDIKL  144 (282)
T ss_pred             CCCcHHHHHHhc---CCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCcccEEEc-----------------cCCCEEE
Confidence            999999887653   46789999999999999999999999999999999999998                 6778999


Q ss_pred             eecCCccccccCCCCccccccccCCCcccceecc-----CCCCCccchHhHHHHHHHHHHhCccccccccCCCC---Cce
Q 018699          209 VDWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQE-----KKPWKFQVDTYGLCAIVHMMLHNSYMEIEKKASPD---GGL  280 (351)
Q Consensus       209 ~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~-----~~~~~~~~DiwslG~il~~l~~g~~p~~~~~~~~~---~~~  280 (351)
                      +|||++......  ........++..|+|||.+.     +..++.++|+||+||++|+|++|..||........   ...
T Consensus       145 ~dfg~~~~~~~~--~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~~~~~~~~  222 (282)
T cd06643         145 ADFGVSAKNTRT--IQRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAQIEPPHHELNPMRVLLKIAK  222 (282)
T ss_pred             cccccccccccc--ccccccccccccccCHhhccccCCCCCCCCccchhhhHHHHHHHHccCCCCccccCHHHHHHHHhh
Confidence            999988643211  12223446788999999873     45577899999999999999999999875432210   000


Q ss_pred             eeecCcchhhhhHHHHHHHHHHHHhcCCCCCChHHHHHHHHHHHHHHhhCh
Q 018699          281 VYLPKLSFKRYWKVELWKSLFTNLLNMSSGNDKEVLQNLQKSFQDYLCSNP  331 (351)
Q Consensus       281 ~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~~~~~~~~~~~~  331 (351)
                      ...+....+..++ ..+.+||.+||+.||++||++.++++|+|.......+
T Consensus       223 ~~~~~~~~~~~~~-~~~~~li~~~l~~~p~~Rp~~~~il~~~~~~~~~~~~  272 (282)
T cd06643         223 SEPPTLAQPSRWS-SEFKDFLKKCLEKNVDARWTTTQLLQHPFVTVNSNKP  272 (282)
T ss_pred             cCCCCCCCccccC-HHHHHHHHHHccCChhhCcCHHHHhcCCCEeccCCCC
Confidence            0111222333344 7899999999999999999999999999855544433

Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration.

>KOG0612 consensus Rho-associated, coiled-coil containing protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=1.5e-40  Score=320.19  Aligned_cols=256  Identities=21%  Similarity=0.264  Sum_probs=205.5

Q ss_pred             EEEcCeeEEEEEEeeccCceEEEEEEecCCCCceEEEEecCCC---CChHHHHHHHHHhhhccccccccccceeeecccC
Q 018699           43 IEIGGKKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPA---FPWEFYMYRQLDQRISGRERSSFGFAHRIHLYSD  119 (351)
Q Consensus        43 ~~i~~~~Y~i~~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~---~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  119 (351)
                      ..+..++|+|++.||+|+||.|.+++ ...+++.||+|++.+.   ...+...+++...........=++..+.-+.+..
T Consensus        70 lrl~~~DfeilKvIGrGaFGEV~lVr-~k~t~~VYAMK~lnK~eMlKr~~tA~F~EERDimv~~ns~Wiv~LhyAFQD~~  148 (1317)
T KOG0612|consen   70 LRLKAEDFEILKVIGRGAFGEVALVR-HKSTEKVYAMKILNKWEMLKRAETACFREERDIMVFGNSEWIVQLHYAFQDER  148 (1317)
T ss_pred             HhCCHHhhHHHHHhcccccceeEEEE-eeccccchhHHHhhHHHHhhchhHHHHHHHhHHHHcCCcHHHHHHHHHhcCcc
Confidence            44567899999999999999999999 5788999999998862   2234445555555544555555666666678899


Q ss_pred             eeEEEEEecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeeccCCCC
Q 018699          120 YSILVCDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSG  199 (351)
Q Consensus       120 ~~~lv~e~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~~~~  199 (351)
                      ++|+||||++||+|..++.++   + .+++..++.++..|+.||..+|+.|+|||||||+||++|               
T Consensus       149 ~LYlVMdY~pGGDlltLlSk~---~-~~pE~~ArFY~aEiVlAldslH~mgyVHRDiKPDNvLld---------------  209 (1317)
T KOG0612|consen  149 YLYLVMDYMPGGDLLTLLSKF---D-RLPEDWARFYTAEIVLALDSLHSMGYVHRDIKPDNVLLD---------------  209 (1317)
T ss_pred             ceEEEEecccCchHHHHHhhc---C-CChHHHHHHHHHHHHHHHHHHHhccceeccCCcceeEec---------------
Confidence            999999999999999999997   4 899999999999999999999999999999999999999               


Q ss_pred             CcccCCeEEeecCCccccccCCCCccccccccCCCcccceecc----C-CCCCccchHhHHHHHHHHHHhCccccccccC
Q 018699          200 PWQDQGLCLVDWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQE----K-KPWKFQVDTYGLCAIVHMMLHNSYMEIEKKA  274 (351)
Q Consensus       200 ~~~~~~~~l~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~----~-~~~~~~~DiwslG~il~~l~~g~~p~~~~~~  274 (351)
                        ..|.++|+|||.+..+...+ .-....-+|||.|++||++.    + +.|+..+|+||+||++|||+.|..||...+-
T Consensus       210 --~~GHikLADFGsClkm~~dG-~V~s~~aVGTPDYISPEvLqs~~~~~g~yG~ecDwWSlGV~~YEMlyG~TPFYadsl  286 (1317)
T KOG0612|consen  210 --KSGHIKLADFGSCLKMDADG-TVRSSVAVGTPDYISPEVLQSQGDGKGEYGRECDWWSLGVFMYEMLYGETPFYADSL  286 (1317)
T ss_pred             --ccCcEeeccchhHHhcCCCC-cEEeccccCCCCccCHHHHHhhcCCccccCCccchhhhHHHHHHHHcCCCcchHHHH
Confidence              89999999999886654221 12234458999999999982    3 5688999999999999999999999997765


Q ss_pred             CCCCceeeec--Ccchh--hhhHHHHHHHHHHHHhcCCCCCChH---HHHHHHHHH
Q 018699          275 SPDGGLVYLP--KLSFK--RYWKVELWKSLFTNLLNMSSGNDKE---VLQNLQKSF  323 (351)
Q Consensus       275 ~~~~~~~~~~--~~~~~--~~~~~~~~~~li~~~L~~dP~~R~s---~~e~l~~~~  323 (351)
                      ..++..++..  ...+|  ...+ +.+++||.+++. +|+.|..   +.++-.|||
T Consensus       287 veTY~KIm~hk~~l~FP~~~~VS-eeakdLI~~ll~-~~e~RLgrngiedik~HpF  340 (1317)
T KOG0612|consen  287 VETYGKIMNHKESLSFPDETDVS-EEAKDLIEALLC-DREVRLGRNGIEDIKNHPF  340 (1317)
T ss_pred             HHHHHHHhchhhhcCCCcccccC-HHHHHHHHHHhc-ChhhhcccccHHHHHhCcc
Confidence            5444444332  33334  1233 889999999886 4788887   999999986

>KOG0671 consensus LAMMER dual specificity kinases [Signal transduction mechanisms]

Probab=100.00  E-value=4e-40  Score=284.96  Aligned_cols=271  Identities=18%  Similarity=0.222  Sum_probs=204.3

Q ss_pred             CeeEEEEEEeeccCceEEEEEEecCCCCceEEEEecCCC------CChHHHHHHHHHhhhccccccccccceeeecccCe
Q 018699           47 GKKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPA------FPWEFYMYRQLDQRISGRERSSFGFAHRIHLYSDY  120 (351)
Q Consensus        47 ~~~Y~i~~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~------~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  120 (351)
                      .++|+++..+|.|+||.|-.+.+ ..++..||||+++.-      ...|.+.+..+.+..... ..-++....++.+.+.
T Consensus        88 ~~Ry~i~~~lGeGtFGkV~ec~D-~~~~~~vAlKIik~V~kYreAa~iEi~vLqki~~~DP~g-~~rcv~m~~wFdyrgh  165 (415)
T KOG0671|consen   88 TNRYEIVDLLGEGTFGKVVECWD-RETKEHVALKIIKNVDKYREAALIEIEVLQKINESDPNG-KFRCVQMRDWFDYRGH  165 (415)
T ss_pred             ccceehhhhhcCCcccceEEEee-cCCCceehHHHHHHHHHHhhHHHHHHHHHHHHHhcCCCC-ceEEEeeehhhhccCc
Confidence            58999999999999999999994 566999999997632      223444444444322111 1123445566888999


Q ss_pred             eEEEEEecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeeccCC---
Q 018699          121 SILVCDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDR---  197 (351)
Q Consensus       121 ~~lv~e~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~~---  197 (351)
                      .|+|+|.+ |-|+.+++.....  .+++...++.++.|++.++++||+.+++|.||||+||++-+............   
T Consensus       166 iCivfell-G~S~~dFlk~N~y--~~fpi~~ir~m~~QL~~sv~fLh~~kl~HTDLKPENILfvss~~~~~~~~k~~~~~  242 (415)
T KOG0671|consen  166 ICIVFELL-GLSTFDFLKENNY--IPFPIDHIRHMGYQLLESVAFLHDLKLTHTDLKPENILFVSSEYFKTYNPKKKVCF  242 (415)
T ss_pred             eEEEEecc-ChhHHHHhccCCc--cccchHHHHHHHHHHHHHHHHHHhcceeecCCChheEEEeccceEEEeccCCccce
Confidence            99999999 8899999987432  47899999999999999999999999999999999999997666554443332   


Q ss_pred             CCCcccCCeEEeecCCccccccCCCCccccccccCCCcccceeccCCCCCccchHhHHHHHHHHHHhCccccccccCCCC
Q 018699          198 SGPWQDQGLCLVDWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQEKKPWKFQVDTYGLCAIVHMMLHNSYMEIEKKASPD  277 (351)
Q Consensus       198 ~~~~~~~~~~l~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~p~~~~~~~~~  277 (351)
                      .....+..++|+|||.|+..     .......+.|..|+|||++.+-+|+.++||||+||||+|+.+|...|......+.
T Consensus       243 ~r~~ks~~I~vIDFGsAtf~-----~e~hs~iVsTRHYRAPEViLgLGwS~pCDvWSiGCIL~ElytG~~LFqtHen~EH  317 (415)
T KOG0671|consen  243 IRPLKSTAIKVIDFGSATFD-----HEHHSTIVSTRHYRAPEVILGLGWSQPCDVWSIGCILVELYTGETLFQTHENLEH  317 (415)
T ss_pred             eccCCCcceEEEecCCccee-----ccCcceeeeccccCCchheeccCcCCccCceeeeeEEEEeeccceecccCCcHHH
Confidence            23445778999999988642     2223566789999999999999999999999999999999999887764432210


Q ss_pred             --------------------------------------C--ceeeecCcchhhhh-----HHHHHHHHHHHHhcCCCCCC
Q 018699          278 --------------------------------------G--GLVYLPKLSFKRYW-----KVELWKSLFTNLLNMSSGND  312 (351)
Q Consensus       278 --------------------------------------~--~~~~~~~~~~~~~~-----~~~~~~~li~~~L~~dP~~R  312 (351)
                                                            +  .+...+..++....     ....+.|||.+||.+||.+|
T Consensus       318 LaMMerIlGp~P~~mi~r~~~~Kyf~~~rldw~e~~~~~~~k~v~~~ckpl~~~~~~~d~e~~~LfDLl~~mL~fDP~~R  397 (415)
T KOG0671|consen  318 LAMMERILGPIPSRMIKKTRKEKYFRRGRLDWPEVSSKGKSKYVFEPCKPLKKYMLQDDLEHVQLFDLLRRMLEFDPARR  397 (415)
T ss_pred             HHHHHHhhCCCcHHHhhhhhhHhhhhcccccCccccccccchhhhcCCccHHHHhccCcHHHhHHHHHHHHHHccCcccc
Confidence                                                  0  11111222222111     11568899999999999999


Q ss_pred             hHHHHHHHHHHHHHH
Q 018699          313 KEVLQNLQKSFQDYL  327 (351)
Q Consensus       313 ~s~~e~l~~~~~~~~  327 (351)
                      +|+.|+|.|||.+.+
T Consensus       398 iTl~EAL~HpFF~~~  412 (415)
T KOG0671|consen  398 ITLREALSHPFFARL  412 (415)
T ss_pred             ccHHHHhcCHHhhcC
Confidence            999999999997754

>cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases

Probab=100.00  E-value=1e-38  Score=281.87  Aligned_cols=252  Identities=16%  Similarity=0.144  Sum_probs=194.6

Q ss_pred             eEEEEEEeeccCceEEEEEEecCCCCceEEEEecCCCCChH------H---HHHHHHHhhhccccccccccceeeecccC
Q 018699           49 KYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFPWE------F---YMYRQLDQRISGRERSSFGFAHRIHLYSD  119 (351)
Q Consensus        49 ~Y~i~~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~~~e------~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  119 (351)
                      +|.+.+.||.|++|.||.|. +..+++.||+|.+.......      .   ..............|+++..........+
T Consensus         1 ~~~~~~~ig~g~~~~v~~a~-~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~   79 (267)
T cd06628           1 KWIKGALIGSGSFGSVYLGM-NASSGELMAVKQVELPSVSASSKDRKRSMLDALAREIALLKELQHENIVQYLGSSLDAD   79 (267)
T ss_pred             CccccceeecCCCeEEEEEE-ecCCCcEEEEEEecCCCcccchhHHHHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEeCC
Confidence            57889999999999999999 56678899999876543221      1   11112222344556788888888877788


Q ss_pred             eeEEEEEecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeeccCCCC
Q 018699          120 YSILVCDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSG  199 (351)
Q Consensus       120 ~~~lv~e~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~~~~  199 (351)
                      ..++||||+++++|.+++..    ...+++..+..++.|++.|+.+||+.|++|+||+|+||+++               
T Consensus        80 ~~~lv~e~~~~~~L~~~l~~----~~~l~~~~~~~~~~~l~~~l~~lH~~~ivH~di~p~nil~~---------------  140 (267)
T cd06628          80 HLNIFLEYVPGGSVAALLNN----YGAFEETLVRNFVRQILKGLNYLHNRGIIHRDIKGANILVD---------------  140 (267)
T ss_pred             ccEEEEEecCCCCHHHHHHh----ccCccHHHHHHHHHHHHHHHHHHHhcCcccccCCHHHEEEc---------------
Confidence            99999999999999999977    46789999999999999999999999999999999999998               


Q ss_pred             CcccCCeEEeecCCccccccCCC----CccccccccCCCcccceeccCCCCCccchHhHHHHHHHHHHhCccccccccCC
Q 018699          200 PWQDQGLCLVDWGRGIDLHLFPD----NMEFEGDCRTSGFRCIEMQEKKPWKFQVDTYGLCAIVHMMLHNSYMEIEKKAS  275 (351)
Q Consensus       200 ~~~~~~~~l~Dfg~a~~~~~~~~----~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~p~~~~~~~  275 (351)
                        .++.++|+|||.+........    ........++..|+|||.+.+..++.++|+|||||++|+|++|..||......
T Consensus       141 --~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~  218 (267)
T cd06628         141 --NKGGIKISDFGISKKLEANSLSTKTNGARPSLQGSVFWMAPEVVKQTSYTRKADIWSLGCLVVEMLTGKHPFPDCTQL  218 (267)
T ss_pred             --CCCCEEecccCCCcccccccccCCccccccccCCCcCccChhHhccCCCCchhhhHHHHHHHHHHhhCCCCCCCccHH
Confidence              677899999998865431111    11112345788999999998888899999999999999999999999754322


Q ss_pred             CCCce-eeecCcchhhhhHHHHHHHHHHHHhcCCCCCChHHHHHHHHHH
Q 018699          276 PDGGL-VYLPKLSFKRYWKVELWKSLFTNLLNMSSGNDKEVLQNLQKSF  323 (351)
Q Consensus       276 ~~~~~-~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~~~~  323 (351)
                      ..... ........+..++ ..+.++|.+||++||++||++.+++.|+|
T Consensus       219 ~~~~~~~~~~~~~~~~~~~-~~~~~li~~~l~~~p~~Rp~~~~il~~~~  266 (267)
T cd06628         219 QAIFKIGENASPEIPSNIS-SEAIDFLEKTFEIDHNKRPTAAELLKHPF  266 (267)
T ss_pred             HHHHHHhccCCCcCCcccC-HHHHHHHHHHccCCchhCcCHHHHhhCCC
Confidence            11000 0011222333344 78899999999999999999999999876

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate

>cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin

Probab=100.00  E-value=2.7e-38  Score=282.76  Aligned_cols=256  Identities=18%  Similarity=0.232  Sum_probs=191.7

Q ss_pred             CeeEEEEEEeeccCceEEEEEEecCCCCceEEEEecCCCCChHHHHHHHHHhhhccccccccccceeeecc-----cCee
Q 018699           47 GKKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFPWEFYMYRQLDQRISGRERSSFGFAHRIHLY-----SDYS  121 (351)
Q Consensus        47 ~~~Y~i~~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~  121 (351)
                      .++|++.+.||+|+||.||+|. +..+++.+|+|++............++........|+++.....++..     .+..
T Consensus        21 ~~~y~~~~~l~~g~~~~vy~~~-~~~~~~~~aik~~~~~~~~~~~~~~e~~~l~~l~~h~ni~~~~~~~~~~~~~~~~~~   99 (291)
T cd06639          21 TDTWEIIETIGKGTYGKVYKVT-NKKDGSLAAVKILDPISDVDEEIEAEYNILQSLPNHPNVVKFYGMFYKADKLVGGQL   99 (291)
T ss_pred             CCCeEEEEEeecCCCeEEEEEE-ECCCCCEEEEEEecccccHHHHHHHHHHHHHHhcCCCCeEEEEEEEEeccccCCCee
Confidence            4689999999999999999999 567889999999875433322222222222222256777777766543     2468


Q ss_pred             EEEEEecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeeccCCCCCc
Q 018699          122 ILVCDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSGPW  201 (351)
Q Consensus       122 ~lv~e~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~~~~~~  201 (351)
                      ++||||+++++|.+++......+..+++..++.++.|++.|+.+||+.|++|+||+|+||+++                 
T Consensus       100 ~lv~ey~~~~sL~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dlkp~nili~-----------------  162 (291)
T cd06639         100 WLVLELCNGGSVTELVKGLLICGQRLDEAMISYILYGALLGLQHLHNNRIIHRDVKGNNILLT-----------------  162 (291)
T ss_pred             EEEEEECCCCcHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEEc-----------------
Confidence            999999999999998875433356789999999999999999999999999999999999998                 


Q ss_pred             ccCCeEEeecCCccccccCCCCccccccccCCCcccceeccCC-----CCCccchHhHHHHHHHHHHhCccccccccCCC
Q 018699          202 QDQGLCLVDWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQEKK-----PWKFQVDTYGLCAIVHMMLHNSYMEIEKKASP  276 (351)
Q Consensus       202 ~~~~~~l~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~-----~~~~~~DiwslG~il~~l~~g~~p~~~~~~~~  276 (351)
                      .++.++|+|||.+......  ........++..|+|||.+...     .++.++||||+||++|+|++|..||.......
T Consensus       163 ~~~~~kl~dfg~~~~~~~~--~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slGvi~~el~~g~~p~~~~~~~~  240 (291)
T cd06639         163 TEGGVKLVDFGVSAQLTST--RLRRNTSVGTPFWMAPEVIACEQQYDYSYDARCDVWSLGITAIELGDGDPPLFDMHPVK  240 (291)
T ss_pred             CCCCEEEeecccchhcccc--cccccCccCCccccChhhhcCCCCcccccCCccchHHHHHHHHHHhhCCCCCCCCcHHH
Confidence            6777999999988643211  1112234578899999987543     35789999999999999999999987543211


Q ss_pred             CC-cee--eecCcchhhhhHHHHHHHHHHHHhcCCCCCChHHHHHHHHHH
Q 018699          277 DG-GLV--YLPKLSFKRYWKVELWKSLFTNLLNMSSGNDKEVLQNLQKSF  323 (351)
Q Consensus       277 ~~-~~~--~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~~~~  323 (351)
                      .. ...  ..+....+..+. ..+.+||.+||+.||++||++.+++.|||
T Consensus       241 ~~~~~~~~~~~~~~~~~~~~-~~l~~li~~~l~~~p~~Rps~~~il~~~~  289 (291)
T cd06639         241 TLFKIPRNPPPTLLHPEKWC-RSFNHFISQCLIKDFEARPSVTHLLEHPF  289 (291)
T ss_pred             HHHHHhcCCCCCCCcccccC-HHHHHHHHHHhhcChhhCcCHHHHhcCcc
Confidence            00 000  011112233344 67999999999999999999999999986

Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre

>cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase

Probab=100.00  E-value=9e-39  Score=292.59  Aligned_cols=250  Identities=19%  Similarity=0.248  Sum_probs=186.1

Q ss_pred             CeeEEEEEEeeccCceEEEEEEecCCCCceEEEEecCCCCChHH--HHHHHHHhhhccccccccccceeeecc------c
Q 018699           47 GKKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFPWEF--YMYRQLDQRISGRERSSFGFAHRIHLY------S  118 (351)
Q Consensus        47 ~~~Y~i~~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~~~e~--~~~~~~~~~~~~~~~~~~~~~~~~~~~------~  118 (351)
                      .++|++.+.||+|+||+||+|. +..+++.||+|++........  .........+....|++++....++..      .
T Consensus        14 ~~~y~~~~~lg~G~~g~V~~~~-~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~   92 (343)
T cd07878          14 PERYQNLTPVGSGAYGSVCSAY-DTRLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHMKHENVIGLLDVFTPATSIENF   92 (343)
T ss_pred             hhhhhhheecccCCCeEEEEEE-ECCCCCEEEEEEeCchhhhhHHHHHHHHHHHHHHhcCCCchhhhhhhhccccccccc
Confidence            4789999999999999999999 567889999999876432211  111111223344456676666554432      2


Q ss_pred             CeeEEEEEecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeeccCCC
Q 018699          119 DYSILVCDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRS  198 (351)
Q Consensus       119 ~~~~lv~e~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~~~  198 (351)
                      ...|++++++ +++|.+++..     ..+++..+..++.||+.||.|||++||+||||||+||+++              
T Consensus        93 ~~~~~~~~~~-~~~l~~~~~~-----~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrdikp~Nil~~--------------  152 (343)
T cd07878          93 NEVYLVTNLM-GADLNNIVKC-----QKLSDEHVQFLIYQLLRGLKYIHSAGIIHRDLKPSNVAVN--------------  152 (343)
T ss_pred             CcEEEEeecC-CCCHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHHCCeecccCChhhEEEC--------------
Confidence            4568999998 8899888754     5699999999999999999999999999999999999999              


Q ss_pred             CCcccCCeEEeecCCccccccCCCCccccccccCCCcccceeccC-CCCCccchHhHHHHHHHHHHhCccccccccCCCC
Q 018699          199 GPWQDQGLCLVDWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQEK-KPWKFQVDTYGLCAIVHMMLHNSYMEIEKKASPD  277 (351)
Q Consensus       199 ~~~~~~~~~l~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~~DiwslG~il~~l~~g~~p~~~~~~~~~  277 (351)
                         .++.++|+|||++....     .......|++.|+|||++.+ ..++.++|||||||++|+|++|..||........
T Consensus       153 ---~~~~~kl~Dfg~~~~~~-----~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~  224 (343)
T cd07878         153 ---EDCELRILDFGLARQAD-----DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLKGKALFPGNDYIDQ  224 (343)
T ss_pred             ---CCCCEEEcCCccceecC-----CCcCCccccccccCchHhcCCccCCchhhhHhHHHHHHHHHHCCCCCCCCCHHHH
Confidence               77889999999986532     12234568999999999876 5678999999999999999999999864321100


Q ss_pred             --------Cc--------------------eeeecCcchhh---hhHHHHHHHHHHHHhcCCCCCChHHHHHHHHHHHHH
Q 018699          278 --------GG--------------------LVYLPKLSFKR---YWKVELWKSLFTNLLNMSSGNDKEVLQNLQKSFQDY  326 (351)
Q Consensus       278 --------~~--------------------~~~~~~~~~~~---~~~~~~~~~li~~~L~~dP~~R~s~~e~l~~~~~~~  326 (351)
                              +.                    ....+......   ..+ +.+.+||.+||.+||++|||+.|++.|||..-
T Consensus       225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~li~~mL~~dp~~R~s~~ell~hp~~~~  303 (343)
T cd07878         225 LKRIMEVVGTPSPEVLKKISSEHARKYIQSLPHMPQQDLKKIFRGAN-PLAIDLLEKMLVLDSDKRISASEALAHPYFSQ  303 (343)
T ss_pred             HHHHHHHhCCCCHHHHHhcchhhHHHHhhccccccchhHHHhccCCC-HHHHHHHHHHcCCChhhCCCHHHHhcCcchhc
Confidence                    00                    00000000000   112 45789999999999999999999999987543

Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is

>cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1

Probab=100.00  E-value=3e-38  Score=284.27  Aligned_cols=256  Identities=12%  Similarity=0.054  Sum_probs=185.7

Q ss_pred             cCeeEEEEEEeeccCceEEEEEEecC---------------CCCceEEEEecCCCCChHH--HHHHHHHhhhcccccccc
Q 018699           46 GGKKYQIKGCAGQGGFAKVFKAYVNG---------------DPEDVVALKIQKPAFPWEF--YMYRQLDQRISGRERSSF  108 (351)
Q Consensus        46 ~~~~Y~i~~~lg~G~~g~V~~a~~~~---------------~~~~~vaiK~~~~~~~~e~--~~~~~~~~~~~~~~~~~~  108 (351)
                      ..++|++.++||+|+||.||+|.++.               .++..||+|++........  ...+++ ..+....|+++
T Consensus         3 ~~~~~~~~~~lg~G~fg~V~~~~~~~~~~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~-~~l~~l~h~ni   81 (304)
T cd05096           3 PRGHLLFKEKLGEGQFGEVHLCEVVNPQDLPTLQFPFNVRKGRPLLVAVKILRPDANKNARNDFLKEV-KILSRLKDPNI   81 (304)
T ss_pred             chhhCeeeeEecccCCeEEEEEEeccCcccccccccccccCCcceEEEEEEecCCCCHHHHHHHHHHH-HHHhhcCCCCe
Confidence            45789999999999999999998522               2345799999876533221  122222 23445567888


Q ss_pred             ccceeeecccCeeEEEEEecCCCCHHHHHHHHHh---------------hCCChhHHHHHHHHHHHHHHHHHHHHCCcee
Q 018699          109 GFAHRIHLYSDYSILVCDYLSQGTLQDAINSYVV---------------IGKSMEEVLCIYYTIEMLCILESLHDVGIIH  173 (351)
Q Consensus       109 ~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~---------------~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H  173 (351)
                      +.........+..++||||+++++|.+++.....               ....+++..+..++.||+.|+.|||+.||+|
T Consensus        82 v~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~ivH  161 (304)
T cd05096          82 IRLLGVCVDEDPLCMITEYMENGDLNQFLSSHHLDDKEENGNDAVPPAHCLPAISYSSLLHVALQIASGMKYLSSLNFVH  161 (304)
T ss_pred             eEEEEEEecCCceEEEEecCCCCcHHHHHHhccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHCCccc
Confidence            8888888778889999999999999999865310               0124677888999999999999999999999


Q ss_pred             cCCCCCcEEEeecCCcceeeccCCCCCcccCCeEEeecCCccccccCCCCccccccccCCCcccceeccCCCCCccchHh
Q 018699          174 GDFKPDNLLIRYARDELTVLDHDRSGPWQDQGLCLVDWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQEKKPWKFQVDTY  253 (351)
Q Consensus       174 ~dl~p~Nill~~~~~~~~~~~~~~~~~~~~~~~~l~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Diw  253 (351)
                      +||||+||+++                 .++.++|+|||++................++..|+|||.+.+..++.++|||
T Consensus       162 ~dlkp~Nill~-----------------~~~~~kl~DfG~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~  224 (304)
T cd05096         162 RDLATRNCLVG-----------------ENLTIKIADFGMSRNLYAGDYYRIQGRAVLPIRWMAWECILMGKFTTASDVW  224 (304)
T ss_pred             cCcchhheEEc-----------------CCccEEECCCccceecccCceeEecCcCCCCccccCHHHHhcCCCCchhhhH
Confidence            99999999999                 6778999999998643211111111223457789999999888899999999


Q ss_pred             HHHHHHHHHHh--CccccccccCCCCC--------ceeeecCcchhhhhHHHHHHHHHHHHhcCCCCCChHHHHHHH
Q 018699          254 GLCAIVHMMLH--NSYMEIEKKASPDG--------GLVYLPKLSFKRYWKVELWKSLFTNLLNMSSGNDKEVLQNLQ  320 (351)
Q Consensus       254 slG~il~~l~~--g~~p~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~  320 (351)
                      ||||++|+|++  +..||.........        ..........+..++ ..+.+||.+||..||.+||++.++..
T Consensus       225 slG~~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~li~~cl~~~p~~RPs~~~i~~  300 (304)
T cd05096         225 AFGVTLWEILMLCKEQPYGELTDEQVIENAGEFFRDQGRQVYLFRPPPCP-QGLYELMLQCWSRDCRERPSFSDIHA  300 (304)
T ss_pred             HHHHHHHHHHHccCCCCCCcCCHHHHHHHHHHHhhhccccccccCCCCCC-HHHHHHHHHHccCCchhCcCHHHHHH
Confidence            99999999986  45666543221000        000000011112223 67899999999999999999999854

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k

>cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6

Probab=100.00  E-value=1.2e-38  Score=283.67  Aligned_cols=254  Identities=17%  Similarity=0.202  Sum_probs=189.4

Q ss_pred             CeeEEEEEEeeccCceEEEEEEecCCCCceEEEEecCCCCChHHHHHHHHHhhhccccccccccceeeec------ccCe
Q 018699           47 GKKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFPWEFYMYRQLDQRISGRERSSFGFAHRIHL------YSDY  120 (351)
Q Consensus        47 ~~~Y~i~~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~  120 (351)
                      .+.|++.+.||.|+||+||+|. +..+++.+|+|++............++........|+++......+.      ....
T Consensus        15 ~~~~~~~~~lg~g~~~~v~~~~-~~~~~~~~a~K~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~~~   93 (282)
T cd06636          15 AGIFELVEVVGNGTYGQVYKGR-HVKTGQLAAIKVMDVTEDEEEEIKLEINMLKKYSHHRNIATYYGAFIKKSPPGHDDQ   93 (282)
T ss_pred             hhhhhhheeeccCCCeEEEEEE-EcCCCcEEEEEEEecChHHHHHHHHHHHHHHHhcCCCcEEEEeeehhcccccCCCCE
Confidence            4689999999999999999999 56778999999986543222222222221111224667666665543      2467


Q ss_pred             eEEEEEecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeeccCCCCC
Q 018699          121 SILVCDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSGP  200 (351)
Q Consensus       121 ~~lv~e~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~~~~~  200 (351)
                      .|++|||+++++|.+++....  +..+++..++.++.|++.|+.|||++|++|+||+|+||+++                
T Consensus        94 ~~iv~e~~~~~~L~~~~~~~~--~~~~~~~~~~~~~~qi~~al~~LH~~~ivH~dl~~~nili~----------------  155 (282)
T cd06636          94 LWLVMEFCGAGSVTDLVKNTK--GNALKEDWIAYICREILRGLAHLHAHKVIHRDIKGQNVLLT----------------  155 (282)
T ss_pred             EEEEEEeCCCCcHHHHHHHcc--CCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEC----------------
Confidence            899999999999999987643  35688899999999999999999999999999999999999                


Q ss_pred             cccCCeEEeecCCccccccCCCCccccccccCCCcccceecc-----CCCCCccchHhHHHHHHHHHHhCccccccccCC
Q 018699          201 WQDQGLCLVDWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQE-----KKPWKFQVDTYGLCAIVHMMLHNSYMEIEKKAS  275 (351)
Q Consensus       201 ~~~~~~~l~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~-----~~~~~~~~DiwslG~il~~l~~g~~p~~~~~~~  275 (351)
                       .++.++|+|||.+.....  .........++..|+|||.+.     +..++.++|+|||||++|+|++|..||....+.
T Consensus       156 -~~~~~~l~dfg~~~~~~~--~~~~~~~~~~~~~y~aPE~l~~~~~~~~~~~~~~DvwslG~~l~el~~g~~p~~~~~~~  232 (282)
T cd06636         156 -ENAEVKLVDFGVSAQLDR--TVGRRNTFIGTPYWMAPEVIACDENPDATYDYRSDIWSLGITAIEMAEGAPPLCDMHPM  232 (282)
T ss_pred             -CCCCEEEeeCcchhhhhc--cccCCCcccccccccCHhhcCcccCcCcCCCcccchhHHHHHHHHHHhCCCCccccCHH
Confidence             677799999998764321  112233456888999999875     356788999999999999999999999754432


Q ss_pred             CCCcee-eecCcc-hhhhhHHHHHHHHHHHHhcCCCCCChHHHHHHHHHH
Q 018699          276 PDGGLV-YLPKLS-FKRYWKVELWKSLFTNLLNMSSGNDKEVLQNLQKSF  323 (351)
Q Consensus       276 ~~~~~~-~~~~~~-~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~~~~  323 (351)
                      ...... ...... ....++ ..+.+||.+||..||.+||++.|++.|||
T Consensus       233 ~~~~~~~~~~~~~~~~~~~~-~~~~~li~~cl~~~p~~Rp~~~ell~~~~  281 (282)
T cd06636         233 RALFLIPRNPPPKLKSKKWS-KKFIDFIEGCLVKNYLSRPSTEQLLKHPF  281 (282)
T ss_pred             hhhhhHhhCCCCCCcccccC-HHHHHHHHHHhCCChhhCcCHHHHhcCCC
Confidence            111110 111111 112234 78999999999999999999999999986

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea

>PHA03211 serine/threonine kinase US3; Provisional

Probab=100.00  E-value=2.1e-38  Score=297.93  Aligned_cols=250  Identities=15%  Similarity=0.149  Sum_probs=188.8

Q ss_pred             cCeeEEEEEEeeccCceEEEEEEecCCCCceEEEEecCCC-CChHHHHHHHHHhhhccccccccccceeeecccCeeEEE
Q 018699           46 GGKKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPA-FPWEFYMYRQLDQRISGRERSSFGFAHRIHLYSDYSILV  124 (351)
Q Consensus        46 ~~~~Y~i~~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~-~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv  124 (351)
                      .+..|.+.+.||+|+||.||+|. +..+++.||||..... ...|..+       +....|++++.+..+...++..++|
T Consensus       167 ~~~gy~i~~~Lg~G~~G~Vy~a~-~~~~~~~vavK~~~~~~~~~E~~i-------L~~L~HpnIv~l~~~~~~~~~~~lv  238 (461)
T PHA03211        167 AGLGFAIHRALTPGSEGCVFESS-HPDYPQRVVVKAGWYASSVHEARL-------LRRLSHPAVLALLDVRVVGGLTCLV  238 (461)
T ss_pred             ccCCeEEEEEEccCCCeEEEEEE-ECCCCCEEEEecccccCHHHHHHH-------HHHCCCCCCCcEEEEEEECCEEEEE
Confidence            35689999999999999999999 5677899999974322 1123222       2334677888888888888899999


Q ss_pred             EEecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeeccCCCCCcccC
Q 018699          125 CDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSGPWQDQ  204 (351)
Q Consensus       125 ~e~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~~~~~~~~~  204 (351)
                      ||++ .++|.+++...   ...+++..++.++.|++.||.|||++||+||||||+||+++                 .++
T Consensus       239 ~e~~-~~~L~~~l~~~---~~~l~~~~~~~i~~qi~~aL~yLH~~gIvHrDLKP~NILl~-----------------~~~  297 (461)
T PHA03211        239 LPKY-RSDLYTYLGAR---LRPLGLAQVTAVARQLLSAIDYIHGEGIIHRDIKTENVLVN-----------------GPE  297 (461)
T ss_pred             EEcc-CCCHHHHHHhc---CCCCCHHHHHHHHHHHHHHHHHHHHCCEEECcCCHHHEEEC-----------------CCC
Confidence            9999 57898888653   35799999999999999999999999999999999999999                 677


Q ss_pred             CeEEeecCCccccccCCCCccccccccCCCcccceeccCCCCCccchHhHHHHHHHHHHhCccccccccCCCC-------
Q 018699          205 GLCLVDWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQEKKPWKFQVDTYGLCAIVHMMLHNSYMEIEKKASPD-------  277 (351)
Q Consensus       205 ~~~l~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~p~~~~~~~~~-------  277 (351)
                      .++|+|||++................||+.|+|||++.+..++.++|||||||++|+|++|..|+........       
T Consensus       298 ~vkL~DFGla~~~~~~~~~~~~~~~~GT~~Y~APE~~~~~~~~~~sDvwSlGviL~El~~g~~~lf~~~~~~~~~~~~~~  377 (461)
T PHA03211        298 DICLGDFGAACFARGSWSTPFHYGIAGTVDTNAPEVLAGDPYTPSVDIWSAGLVIFEAAVHTASLFSASRGDERRPYDAQ  377 (461)
T ss_pred             CEEEcccCCceecccccccccccccCCCcCCcCHHHHcCCCCCchHHHHHHHHHHHHHHHcCCCcccCCcccccCCcHHH
Confidence            8999999998653321111122345689999999999999999999999999999999998765433211100       


Q ss_pred             -------Ccee---eec------------------Cc-chhhhhH-----HHHHHHHHHHHhcCCCCCChHHHHHHHHHH
Q 018699          278 -------GGLV---YLP------------------KL-SFKRYWK-----VELWKSLFTNLLNMSSGNDKEVLQNLQKSF  323 (351)
Q Consensus       278 -------~~~~---~~~------------------~~-~~~~~~~-----~~~~~~li~~~L~~dP~~R~s~~e~l~~~~  323 (351)
                             ....   +..                  .. .....|.     ...+.+||.+||..||.+|||+.|+|+|+|
T Consensus       378 l~~~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~DP~~RPsa~elL~hp~  457 (461)
T PHA03211        378 ILRIIRQAQVHVDEFPQHAGSRLVSQYRHRAARNRRPAYTRPAWTRYYKLDLDVEYLVCRALTFDGARRPSAAELLRLPL  457 (461)
T ss_pred             HHHHHHhhccccccCCCCcchHHHHHHHhhhhcccCCccCCcchhhhccccchHHHHHHHHcccChhhCcCHHHHhhCcc
Confidence                   0000   000                  00 0000111     147889999999999999999999999986


Q ss_pred             H
Q 018699          324 Q  324 (351)
Q Consensus       324 ~  324 (351)
                      .
T Consensus       458 f  458 (461)
T PHA03211        458 F  458 (461)
T ss_pred             c
Confidence            4

>cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8

Probab=100.00  E-value=2.7e-38  Score=277.24  Aligned_cols=252  Identities=16%  Similarity=0.147  Sum_probs=195.0

Q ss_pred             eEEEEEEeeccCceEEEEEEecCCCCceEEEEecCCCCCh--HHHHHHHHHhhhccccccccccceeeecccCeeEEEEE
Q 018699           49 KYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFPW--EFYMYRQLDQRISGRERSSFGFAHRIHLYSDYSILVCD  126 (351)
Q Consensus        49 ~Y~i~~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~~~--e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e  126 (351)
                      +|++.+.||.|++|.||+|. +..+++.+|+|.+......  +...+......+....++++.........++..++|||
T Consensus         1 ~y~~~~~lg~g~~~~v~~~~-~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e   79 (256)
T cd08220           1 KYEKIRVVGRGAFGIVHLCR-RKADQKLVIIKQIPVEQMTKDERLAAQNECQVLKLLSHPNIIEYYENFLEDKALMIVME   79 (256)
T ss_pred             CceEEEEecccCceEEEEEE-EcCCCcEEEEEEEeccccccHHHHHHHHHHHHHhhCCCCchhheeeeEecCCEEEEEEe
Confidence            59999999999999999999 5678899999998654322  22222222233444567777777777777889999999


Q ss_pred             ecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeeccCCCCCcccCCe
Q 018699          127 YLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSGPWQDQGL  206 (351)
Q Consensus       127 ~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~~~~~~~~~~~  206 (351)
                      |+++++|.+++....  +..+++..+..++.|++.++++||++|++|+||+|+||+++.                .++.+
T Consensus        80 ~~~~~~L~~~~~~~~--~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~----------------~~~~~  141 (256)
T cd08220          80 YAPGGTLAEYIQKRC--NSLLDEDTILHFFVQILLALHHVHTKLILHRDLKTQNILLDK----------------HKMVV  141 (256)
T ss_pred             cCCCCCHHHHHHHhc--ccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcC----------------CCCEE
Confidence            999999999997642  356899999999999999999999999999999999999973                23457


Q ss_pred             EEeecCCccccccCCCCccccccccCCCcccceeccCCCCCccchHhHHHHHHHHHHhCccccccccCCCCCce-eeecC
Q 018699          207 CLVDWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQEKKPWKFQVDTYGLCAIVHMMLHNSYMEIEKKASPDGGL-VYLPK  285 (351)
Q Consensus       207 ~l~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~p~~~~~~~~~~~~-~~~~~  285 (351)
                      +|+|||.+.....   ........++..|+|||.+.+..++.++|+||+|+++|+|++|..||........... .....
T Consensus       142 ~l~d~~~~~~~~~---~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~  218 (256)
T cd08220         142 KIGDFGISKILSS---KSKAYTVVGTPCYISPELCEGKPYNQKSDIWALGCVLYELASLKRAFEAANLPALVLKIMSGTF  218 (256)
T ss_pred             EEccCCCceecCC---CccccccccCCcccCchhccCCCCCcccchHHHHHHHHHHHhCCCCcccCchHHHHHHHHhcCC
Confidence            9999998865321   1222334678899999999888889999999999999999999999865443211100 01112


Q ss_pred             cchhhhhHHHHHHHHHHHHhcCCCCCChHHHHHHHHHH
Q 018699          286 LSFKRYWKVELWKSLFTNLLNMSSGNDKEVLQNLQKSF  323 (351)
Q Consensus       286 ~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~~~~  323 (351)
                      .+.+..++ ..+.++|.+||.+||++||++.|+++|||
T Consensus       219 ~~~~~~~~-~~l~~li~~~l~~~p~~Rpt~~~ll~~p~  255 (256)
T cd08220         219 APISDRYS-PDLRQLILSMLNLDPSKRPQLSQIMAQPI  255 (256)
T ss_pred             CCCCCCcC-HHHHHHHHHHccCChhhCCCHHHHhhCCC
Confidence            22333344 78999999999999999999999999986

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with

>KOG0586 consensus Serine/threonine protein kinase [General function prediction only]

Probab=100.00  E-value=1.1e-38  Score=291.49  Aligned_cols=259  Identities=18%  Similarity=0.164  Sum_probs=221.3

Q ss_pred             CeeEEEEEEeeccCceEEEEEEecCCCCceEEEEecCCCCChHHHHHH--HHHhhhccccccccccceeeecccCeeEEE
Q 018699           47 GKKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFPWEFYMYR--QLDQRISGRERSSFGFAHRIHLYSDYSILV  124 (351)
Q Consensus        47 ~~~Y~i~~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~~~e~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv  124 (351)
                      .+.|.+.+.||+|.|+.|.+|+ +..++..||||++.+...+.....+  ..........|++++.+..+......+|+|
T Consensus        55 vg~y~i~~tig~g~f~~V~La~-~~~t~~~VaiK~idkt~ln~~~~~k~~rev~imk~l~HPnIvkl~~v~~t~~~lylV  133 (596)
T KOG0586|consen   55 VGLYVIIKTIGKGNFAKVKLAR-HILTGTEVAIKIIDKTQLNPSKRQKLGREVDIMKSLNHPNIVKLFSVIETEATLYLV  133 (596)
T ss_pred             ccceeeeeeeccceeEEEEeeE-ecCCCceEEEEEehhcccChHHHHHHHHHHHHHHhcCCcceeeeeeeeeecceeEEE
Confidence            3689999999999999999999 5788999999999998776554333  222334566789999999988889999999


Q ss_pred             EEecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeeccCCCCCcccC
Q 018699          125 CDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSGPWQDQ  204 (351)
Q Consensus       125 ~e~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~~~~~~~~~  204 (351)
                      |||+.+|.+.+++.+    .+.+.+..+..++.|++.|++|||+++|+|||||.+||+++                 .+.
T Consensus       134 ~eya~~ge~~~yl~~----~gr~~e~~ar~~F~q~vsaveYcH~k~ivHrdLk~eNilL~-----------------~~m  192 (596)
T KOG0586|consen  134 MEYASGGELFDYLVK----HGRMKEKEARAKFRQIVSAVEYCHSKNIVHRDLKAENILLD-----------------ENM  192 (596)
T ss_pred             EEeccCchhHHHHHh----cccchhhhhhhhhHHHHHHHHHHhhcceeccccchhhcccc-----------------ccc
Confidence            999999999999998    46788899999999999999999999999999999999999                 777


Q ss_pred             CeEEeecCCccccccCCCCccccccccCCCcccceeccCCCCC-ccchHhHHHHHHHHHHhCccccccccCCCCCceeee
Q 018699          205 GLCLVDWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQEKKPWK-FQVDTYGLCAIVHMMLHNSYMEIEKKASPDGGLVYL  283 (351)
Q Consensus       205 ~~~l~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~-~~~DiwslG~il~~l~~g~~p~~~~~~~~~~~~~~~  283 (351)
                      ++||+|||++...   ..+....+++|++.|.|||++.+..|+ +.+|+||+|+++|.|..|..||...+-.....-...
T Consensus       193 nikIaDfgfS~~~---~~~~~lqt~cgsppyAaPEl~~g~~y~gpe~D~Wslgvvly~LV~GsLPFDG~~lk~Lr~rvl~  269 (596)
T KOG0586|consen  193 NIKIADFGFSTFF---DYGLMLQTFCGSPPYAAPELFNGKKYDGPEVDIWSLGVVLYALVEGSLPFDGQNLKELRPRVLR  269 (596)
T ss_pred             ceeeeccccceee---cccccccccCCCCCccChHhhcCcccCCcceehhhhhhhheeeeecccccCCcccccccchhee
Confidence            7999999999643   356667889999999999999998886 999999999999999999999997765543333444


Q ss_pred             cCcchhhhhHHHHHHHHHHHHhcCCCCCChHHHHHHHHHHHHHHhhCh
Q 018699          284 PKLSFKRYWKVELWKSLFTNLLNMSSGNDKEVLQNLQKSFQDYLCSNP  331 (351)
Q Consensus       284 ~~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~~~~~~~~~~~~  331 (351)
                      ....++.+.+ .+++++|+++|.++|.+|++..+++.|.|.+.+.+.+
T Consensus       270 gk~rIp~~ms-~dce~lLrk~lvl~Pskr~~~dqim~~~W~n~~~~~~  316 (596)
T KOG0586|consen  270 GKYRIPFYMS-CDCEDLLRKFLVLNPSKRGPCDQIMKDRWRNDLLEAR  316 (596)
T ss_pred             eeecccceee-chhHHHHHHhhccCccccCCHHHhhhhcccchhhhhh
Confidence            5555565556 8899999999999999999999999999877666553

>cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors

Probab=100.00  E-value=1.9e-38  Score=289.42  Aligned_cols=261  Identities=15%  Similarity=0.132  Sum_probs=189.8

Q ss_pred             EEEcCeeEEEEEEeeccCceEEEEEEe----cCCCCceEEEEecCCCCChH-H-HHHHHHHhhhccccccccccceeeec
Q 018699           43 IEIGGKKYQIKGCAGQGGFAKVFKAYV----NGDPEDVVALKIQKPAFPWE-F-YMYRQLDQRISGRERSSFGFAHRIHL  116 (351)
Q Consensus        43 ~~i~~~~Y~i~~~lg~G~~g~V~~a~~----~~~~~~~vaiK~~~~~~~~e-~-~~~~~~~~~~~~~~~~~~~~~~~~~~  116 (351)
                      +.+.+++|++.+.||.|+||.||+|.+    +..+++.||+|++....... . ....++........|++++.......
T Consensus         2 ~~~~~~~~~i~~~lG~G~fg~Vy~a~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~~~~l~~h~niv~~~~~~~   81 (337)
T cd05054           2 WEFPRDRLKLGKPLGRGAFGKVIQASAFGIEKSASCRTVAVKMLKEGATASEYKALMTELKILIHIGHHLNVVNLLGACT   81 (337)
T ss_pred             cccCHHHhhhhcccccCcCceEEeccccccccccccceeeeeeccCCCCHHHHHHHHHHHHHHHhhccCcchhheeeeEe
Confidence            356678999999999999999999974    22346889999987543322 1 22223222222225667777665543


Q ss_pred             -ccCeeEEEEEecCCCCHHHHHHHHHhh----------------------------------------------------
Q 018699          117 -YSDYSILVCDYLSQGTLQDAINSYVVI----------------------------------------------------  143 (351)
Q Consensus       117 -~~~~~~lv~e~~~~~sL~~~l~~~~~~----------------------------------------------------  143 (351)
                       .+..++++|||+++++|.+++......                                                    
T Consensus        82 ~~~~~~~~v~ey~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  161 (337)
T cd05054          82 KPGGPLMVIVEYCKFGNLSNYLRSKRECFSPYRNKSTRKREMKQKEGKKQRLDSVSSSQSSASSGFIEDKSLSDVEEDEE  161 (337)
T ss_pred             cCCCCEEEEEecCCCCCHHHHHHhccccccccccccccccccccccccccccccCCccccccccccccCcchhhcccchh
Confidence             456788999999999999998653110                                                    


Q ss_pred             -----CCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeeccCCCCCcccCCeEEeecCCccccc
Q 018699          144 -----GKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSGPWQDQGLCLVDWGRGIDLH  218 (351)
Q Consensus       144 -----~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~~~~~~~~~~~~l~Dfg~a~~~~  218 (351)
                           ...+++..+..++.||+.|+.|||++||+||||||+||+++                 .++.++|+|||++....
T Consensus       162 ~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~~ivHrDikp~Nill~-----------------~~~~vkL~DfG~a~~~~  224 (337)
T cd05054         162 GDELYKEPLTLEDLISYSFQVARGMEFLASRKCIHRDLAARNILLS-----------------ENNVVKICDFGLARDIY  224 (337)
T ss_pred             hhHHhhcCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCcceEEEe-----------------CCCcEEEeccccchhcc
Confidence                 12678899999999999999999999999999999999999                 66779999999986543


Q ss_pred             cCCCCccccccccCCCcccceeccCCCCCccchHhHHHHHHHHHHh-CccccccccCCCC--CceeeecCcchhhhhHHH
Q 018699          219 LFPDNMEFEGDCRTSGFRCIEMQEKKPWKFQVDTYGLCAIVHMMLH-NSYMEIEKKASPD--GGLVYLPKLSFKRYWKVE  295 (351)
Q Consensus       219 ~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~-g~~p~~~~~~~~~--~~~~~~~~~~~~~~~~~~  295 (351)
                      ............++..|+|||.+.+..++.++|||||||++|+|++ |..||........  ...........+..+. +
T Consensus       225 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~SlGv~l~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~-~  303 (337)
T cd05054         225 KDPDYVRKGDARLPLKWMAPESIFDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQIDEEFCRRLKEGTRMRAPEYAT-P  303 (337)
T ss_pred             cCcchhhccCCCCCccccCcHHhcCCCCCccccHHHHHHHHHHHHHcCCCCCCCCCccHHHHHHHhccCCCCCCccCC-H
Confidence            2211112223345678999999999999999999999999999997 9999864322110  0000011112223334 7


Q ss_pred             HHHHHHHHHhcCCCCCChHHHHHHHH
Q 018699          296 LWKSLFTNLLNMSSGNDKEVLQNLQK  321 (351)
Q Consensus       296 ~~~~li~~~L~~dP~~R~s~~e~l~~  321 (351)
                      .+.+++.+||+.+|++||++.+++++
T Consensus       304 ~~~~l~~~cl~~~p~~RPs~~ell~~  329 (337)
T cd05054         304 EIYSIMLDCWHNNPEDRPTFSELVEI  329 (337)
T ss_pred             HHHHHHHHHccCChhhCcCHHHHHHH
Confidence            88999999999999999999999886

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto

>cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase

Probab=100.00  E-value=2.4e-38  Score=278.98  Aligned_cols=254  Identities=11%  Similarity=0.087  Sum_probs=192.3

Q ss_pred             EcCeeEEEEEEeeccCceEEEEEEecCCCCceEEEEecCCCCChHHHHHHHHHhhhccccccccccceeeecccCeeEEE
Q 018699           45 IGGKKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFPWEFYMYRQLDQRISGRERSSFGFAHRIHLYSDYSILV  124 (351)
Q Consensus        45 i~~~~Y~i~~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv  124 (351)
                      +....|++.+.||.|++|.||+|.+ ..+++.||+|++..+.........++ .......++++.....+....+..++|
T Consensus         3 ~~~~~~~~~~~ig~g~~~~v~~~~~-~~~~~~~~~K~~~~~~~~~~~~~~e~-~~l~~l~h~~i~~~~~~~~~~~~~~lv   80 (263)
T cd05052           3 MERTDITMKHKLGGGQYGEVYEGVW-KKYSLTVAVKTLKEDTMEVEEFLKEA-AVMKEIKHPNLVQLLGVCTREPPFYII   80 (263)
T ss_pred             CchHHeEEeeecCCcccceEEEEEE-ecCCceEEEEEecCCchHHHHHHHHH-HHHHhCCCCChhheEEEEcCCCCcEEE
Confidence            4567899999999999999999994 56788999999876543222222222 233345677888888877778889999


Q ss_pred             EEecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeeccCCCCCcccC
Q 018699          125 CDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSGPWQDQ  204 (351)
Q Consensus       125 ~e~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~~~~~~~~~  204 (351)
                      |||+++++|.+++....  ...+++..++.++.|++.|++|||++|++|+||+|+||+++                 .++
T Consensus        81 ~e~~~~~~L~~~~~~~~--~~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~dlkp~nil~~-----------------~~~  141 (263)
T cd05052          81 TEFMTYGNLLDYLRECN--RQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVG-----------------ENH  141 (263)
T ss_pred             EEeCCCCcHHHHHHhCC--CCCCCHHHHHHHHHHHHHHHHHHHhCCEeecccCcceEEEc-----------------CCC
Confidence            99999999999987642  34688999999999999999999999999999999999998                 677


Q ss_pred             CeEEeecCCccccccCCCCccccccccCCCcccceeccCCCCCccchHhHHHHHHHHHHh-CccccccccCCCCCcee-e
Q 018699          205 GLCLVDWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQEKKPWKFQVDTYGLCAIVHMMLH-NSYMEIEKKASPDGGLV-Y  282 (351)
Q Consensus       205 ~~~l~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~-g~~p~~~~~~~~~~~~~-~  282 (351)
                      .++|+|||.+....... .........+..|+|||.+.+..++.++|||||||++|+|++ |..||............ .
T Consensus       142 ~~kl~df~~~~~~~~~~-~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~t~g~~p~~~~~~~~~~~~~~~  220 (263)
T cd05052         142 LVKVADFGLSRLMTGDT-YTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEK  220 (263)
T ss_pred             cEEeCCCccccccccce-eeccCCCCCccccCCHHHhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHC
Confidence            89999999886432110 011112223567999999988888999999999999999998 88888543221100000 0


Q ss_pred             ecCcchhhhhHHHHHHHHHHHHhcCCCCCChHHHHHHHH
Q 018699          283 LPKLSFKRYWKVELWKSLFTNLLNMSSGNDKEVLQNLQK  321 (351)
Q Consensus       283 ~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~~  321 (351)
                      ......+...+ ..+.++|.+||+.||++||++.++++.
T Consensus       221 ~~~~~~~~~~~-~~~~~li~~cl~~~p~~Rp~~~~l~~~  258 (263)
T cd05052         221 GYRMERPEGCP-PKVYELMRACWQWNPSDRPSFAEIHQA  258 (263)
T ss_pred             CCCCCCCCCCC-HHHHHHHHHHccCCcccCCCHHHHHHH
Confidence            11222333344 789999999999999999999999765

Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays

>PHA03390 pk1 serine/threonine-protein kinase 1; Provisional

Probab=100.00  E-value=2.3e-38  Score=279.80  Aligned_cols=244  Identities=17%  Similarity=0.135  Sum_probs=190.0

Q ss_pred             eeEEEEEEe--eccCceEEEEEEecCCCCceEEEEecCCCCChHHHHHHHHHhhhccccccccccceeeecccCeeEEEE
Q 018699           48 KKYQIKGCA--GQGGFAKVFKAYVNGDPEDVVALKIQKPAFPWEFYMYRQLDQRISGRERSSFGFAHRIHLYSDYSILVC  125 (351)
Q Consensus        48 ~~Y~i~~~l--g~G~~g~V~~a~~~~~~~~~vaiK~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~  125 (351)
                      +.|++.+.+  |.|+||.||++. +..+++.+|+|.+......+.+...   .. ....+++++.....+...+..|+||
T Consensus        14 ~~~~~~~~~~lg~g~~g~v~~~~-~~~~~~~~~~k~~~~~~~~~~e~~~---~~-~~~~h~~iv~~~~~~~~~~~~~iv~   88 (267)
T PHA03390         14 KNCEIVKKLKLIDGKFGKVSVLK-HKPTQKLFVQKIIKAKNFNAIEPMV---HQ-LMKDNPNFIKLYYSVTTLKGHVLIM   88 (267)
T ss_pred             HhhccccceeecCCCceEEEEEE-EcCCCcEEEEEEEehhhcchhhHHH---HH-HhhcCCCEEEEEEEEecCCeeEEEE
Confidence            466777776  999999999999 5677899999998765333322211   11 1225678888888877788999999


Q ss_pred             EecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeeccCCCCCcccC-
Q 018699          126 DYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSGPWQDQ-  204 (351)
Q Consensus       126 e~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~~~~~~~~~-  204 (351)
                      ||+++++|.+++..    +..+++..++.++.|++.|+.+||+.|++|+||+|+||+++                 .++ 
T Consensus        89 e~~~~~~L~~~l~~----~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nil~~-----------------~~~~  147 (267)
T PHA03390         89 DYIKDGDLFDLLKK----EGKLSEAEVKKIIRQLVEALNDLHKHNIIHNDIKLENVLYD-----------------RAKD  147 (267)
T ss_pred             EcCCCCcHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEEe-----------------CCCC
Confidence            99999999999987    45899999999999999999999999999999999999999                 455 


Q ss_pred             CeEEeecCCccccccCCCCccccccccCCCcccceeccCCCCCccchHhHHHHHHHHHHhCccccccccCCCC--Cce--
Q 018699          205 GLCLVDWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQEKKPWKFQVDTYGLCAIVHMMLHNSYMEIEKKASPD--GGL--  280 (351)
Q Consensus       205 ~~~l~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~p~~~~~~~~~--~~~--  280 (351)
                      .++|+|||.+.....      .....++..|+|||.+.+..++.++|+||+|+++|+|++|..||........  ...  
T Consensus       148 ~~~l~dfg~~~~~~~------~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~~l~~g~~p~~~~~~~~~~~~~~~~  221 (267)
T PHA03390        148 RIYLCDYGLCKIIGT------PSCYDGTLDYFSPEKIKGHNYDVSFDWWAVGVLTYELLTGKHPFKEDEDEELDLESLLK  221 (267)
T ss_pred             eEEEecCccceecCC------CccCCCCCcccChhhhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCcchhhHHHHHH
Confidence            799999998864321      1223578899999999988899999999999999999999999974432210  000  


Q ss_pred             eeecCcchhhhhHHHHHHHHHHHHhcCCCCCChH-HHHHHHHHHH
Q 018699          281 VYLPKLSFKRYWKVELWKSLFTNLLNMSSGNDKE-VLQNLQKSFQ  324 (351)
Q Consensus       281 ~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~s-~~e~l~~~~~  324 (351)
                      ........+...+ ..+.+||.+||++||.+|++ ..++|.|+|.
T Consensus       222 ~~~~~~~~~~~~~-~~~~~li~~~l~~~p~~R~~~~~~~l~h~~~  265 (267)
T PHA03390        222 RQQKKLPFIKNVS-KNANDFVQSMLKYNINYRLTNYNEIIKHPFL  265 (267)
T ss_pred             hhcccCCcccccC-HHHHHHHHHHhccChhhCCchHHHHhcCCcc
Confidence            0111112222344 88999999999999999996 5999999863

>cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B

Probab=100.00  E-value=2.1e-38  Score=283.17  Aligned_cols=259  Identities=13%  Similarity=0.053  Sum_probs=192.2

Q ss_pred             EcCeeEEEEEEeeccCceEEEEEEec----CCCCceEEEEecCCCCChHHHHHHHHHhhhccccccccccceeeecccCe
Q 018699           45 IGGKKYQIKGCAGQGGFAKVFKAYVN----GDPEDVVALKIQKPAFPWEFYMYRQLDQRISGRERSSFGFAHRIHLYSDY  120 (351)
Q Consensus        45 i~~~~Y~i~~~lg~G~~g~V~~a~~~----~~~~~~vaiK~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  120 (351)
                      |++++|.+.+.||.|+||+||++.+.    ..++..+|+|.+..........+...........+++++.........+.
T Consensus         2 ~~~~~~~~~~~lg~G~~~~v~~~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~   81 (288)
T cd05093           2 IKRHNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGVCVEGDP   81 (288)
T ss_pred             CchHHeeeccccCCcCCeeEEeeEeccCCCCCcceEEEEEecCCcCHHHHHHHHHHHHHHHhCCCCCcceEEEEEecCCc
Confidence            46788999999999999999999841    23456789999876543322222222233445567888888888888889


Q ss_pred             eEEEEEecCCCCHHHHHHHHH---------hhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcce
Q 018699          121 SILVCDYLSQGTLQDAINSYV---------VIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELT  191 (351)
Q Consensus       121 ~~lv~e~~~~~sL~~~l~~~~---------~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~  191 (351)
                      .++||||+++++|.+++....         .....+++..++.++.|++.|++|||++|++||||+|+||+++       
T Consensus        82 ~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~lH~~~i~H~dlkp~Nili~-------  154 (288)
T cd05093          82 LIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNRPAELTQSQMLHIAQQIAAGMVYLASQHFVHRDLATRNCLVG-------  154 (288)
T ss_pred             cEEEEEcCCCCCHHHHHHHcCCccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCcceEEEc-------
Confidence            999999999999999987531         0112489999999999999999999999999999999999999       


Q ss_pred             eeccCCCCCcccCCeEEeecCCccccccCCCCccccccccCCCcccceeccCCCCCccchHhHHHHHHHHHHh-Cccccc
Q 018699          192 VLDHDRSGPWQDQGLCLVDWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQEKKPWKFQVDTYGLCAIVHMMLH-NSYMEI  270 (351)
Q Consensus       192 ~~~~~~~~~~~~~~~~l~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~-g~~p~~  270 (351)
                                .++.++|+|||.+................++..|+|||.+.+..++.++|||||||++|+|++ |..||.
T Consensus       155 ----------~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDiwslG~il~~l~t~g~~p~~  224 (288)
T cd05093         155 ----------ENLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWY  224 (288)
T ss_pred             ----------cCCcEEeccCCccccccCCceeecCCCCCccccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCC
Confidence                      677899999998864321111111122334678999999988888999999999999999998 888886


Q ss_pred             cccCCCCCce-eeecCcchhhhhHHHHHHHHHHHHhcCCCCCChHHHHHHHH
Q 018699          271 EKKASPDGGL-VYLPKLSFKRYWKVELWKSLFTNLLNMSSGNDKEVLQNLQK  321 (351)
Q Consensus       271 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~~  321 (351)
                      .......... ........+...+ ..+.+|+.+||++||.+||++.+++..
T Consensus       225 ~~~~~~~~~~i~~~~~~~~~~~~~-~~l~~li~~~l~~~p~~Rpt~~~v~~~  275 (288)
T cd05093         225 QLSNNEVIECITQGRVLQRPRTCP-KEVYDLMLGCWQREPHMRLNIKEIHSL  275 (288)
T ss_pred             CCCHHHHHHHHHcCCcCCCCCCCC-HHHHHHHHHHccCChhhCCCHHHHHHH
Confidence            5432110000 0001112222334 679999999999999999999988543

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly

>cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8

Probab=100.00  E-value=4.3e-38  Score=284.92  Aligned_cols=255  Identities=16%  Similarity=0.150  Sum_probs=180.8

Q ss_pred             EEEeeccCceEEEEEEec-CCCCceEEEEecCCCCChHHHHHHHHHhhhccccccccccceeeec--ccCeeEEEEEecC
Q 018699           53 KGCAGQGGFAKVFKAYVN-GDPEDVVALKIQKPAFPWEFYMYRQLDQRISGRERSSFGFAHRIHL--YSDYSILVCDYLS  129 (351)
Q Consensus        53 ~~~lg~G~~g~V~~a~~~-~~~~~~vaiK~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~lv~e~~~  129 (351)
                      .++||+|+||+||+|++. ..+++.||+|.+...... ....+++ .......|++++.....+.  .+...|++|||+ 
T Consensus         6 ~~~lG~G~~g~Vy~~~~~~~~~~~~~aiK~~~~~~~~-~~~~~E~-~~l~~l~h~niv~~~~~~~~~~~~~~~lv~e~~-   82 (317)
T cd07868           6 GCKVGRGTYGHVYKAKRKDGKDDRDYALKQIEGTGIS-MSACREI-ALLRELKHPNVISLQKVFLSHADRKVWLLFDYA-   82 (317)
T ss_pred             ccccccCCCeEEEEEEEccCCCCceEEEEEECCCCCc-HHHHHHH-HHHHhcCCCCCcceeeeEecCCCcEEEEEEecc-
Confidence            468999999999999952 246789999998754322 1122222 2233446777777766653  356789999999 


Q ss_pred             CCCHHHHHHHHHh-----hCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeeccCCCCCcccC
Q 018699          130 QGTLQDAINSYVV-----IGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSGPWQDQ  204 (351)
Q Consensus       130 ~~sL~~~l~~~~~-----~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~~~~~~~~~  204 (351)
                      +++|.+++.....     ....+++..++.++.||+.|+.|||++||+||||||+||++...+.             ..+
T Consensus        83 ~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~ivHrDlkp~Nil~~~~~~-------------~~~  149 (317)
T cd07868          83 EHDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEGP-------------ERG  149 (317)
T ss_pred             CCCHHHHHHhcccccccCCcccCCHHHHHHHHHHHHHHHHHHHhCCEEcCCCCHHHEEEecCCC-------------CcC
Confidence            5689888764310     0125899999999999999999999999999999999999964322             457


Q ss_pred             CeEEeecCCccccccCC-CCccccccccCCCcccceeccC-CCCCccchHhHHHHHHHHHHhCccccccccCCCCCcee-
Q 018699          205 GLCLVDWGRGIDLHLFP-DNMEFEGDCRTSGFRCIEMQEK-KPWKFQVDTYGLCAIVHMMLHNSYMEIEKKASPDGGLV-  281 (351)
Q Consensus       205 ~~~l~Dfg~a~~~~~~~-~~~~~~~~~g~~~y~aPE~~~~-~~~~~~~DiwslG~il~~l~~g~~p~~~~~~~~~~~~~-  281 (351)
                      .++|+|||++....... .........+|+.|+|||++.+ ..++.++||||+||++|+|++|.+||............ 
T Consensus       150 ~~kl~DfG~a~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~f~~~~~~~~~~~~~  229 (317)
T cd07868         150 RVKIADMGFARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPY  229 (317)
T ss_pred             cEEEeecCceeccCCCCccccccCCccccccccCCHHHcCCCCcCchhhHHHHHHHHHHHHhCCCCccCCcccccccccc
Confidence            79999999986543211 1122344578999999999876 45789999999999999999999998643322110000 


Q ss_pred             -------------------ee-----c---------------Ccchhhh------hHHHHHHHHHHHHhcCCCCCChHHH
Q 018699          282 -------------------YL-----P---------------KLSFKRY------WKVELWKSLFTNLLNMSSGNDKEVL  316 (351)
Q Consensus       282 -------------------~~-----~---------------~~~~~~~------~~~~~~~~li~~~L~~dP~~R~s~~  316 (351)
                                         +.     +               .......      ..+..+.+||.+||.+||.+|||+.
T Consensus       230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dP~~R~t~~  309 (317)
T cd07868         230 HHDQLDRIFNVMGFPADKDWEDIKKMPEHSTLMKDFRRNTYTNCSLIKYMEKHKVKPDSKAFHLLQKLLTMDPIKRITSE  309 (317)
T ss_pred             cHHHHHHHHHhcCCCChHHhHHHhhccchhhhhhhhhccccCcccccchHHhcCCCCChHHHHHHHHHhccCcccCCCHH
Confidence                               00     0               0000000      0014578999999999999999999


Q ss_pred             HHHHHHH
Q 018699          317 QNLQKSF  323 (351)
Q Consensus       317 e~l~~~~  323 (351)
                      |+|+|||
T Consensus       310 e~l~hp~  316 (317)
T cd07868         310 QAMQDPY  316 (317)
T ss_pred             HHhcCCC
Confidence            9999986

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p

>cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2

Probab=100.00  E-value=2.4e-38  Score=277.61  Aligned_cols=251  Identities=18%  Similarity=0.157  Sum_probs=197.2

Q ss_pred             CeeEEEEEEeeccCceEEEEEEecCCCCceEEEEecCCCCChHHHHHHHHHhhhccccccccccceeeecccCeeEEEEE
Q 018699           47 GKKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFPWEFYMYRQLDQRISGRERSSFGFAHRIHLYSDYSILVCD  126 (351)
Q Consensus        47 ~~~Y~i~~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e  126 (351)
                      .++|++.+.||.|++|.||+|.+ ..+++.+++|.+.....  ...+...........++++..+...+......|+++|
T Consensus         2 ~~~y~~~~~i~~g~~~~v~~~~~-~~~~~~~~~k~~~~~~~--~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~l~~e   78 (256)
T cd06612           2 EEVFDILEKLGEGSYGSVYKAIH-KETGQVVAIKVVPVEED--LQEIIKEISILKQCDSPYIVKYYGSYFKNTDLWIVME   78 (256)
T ss_pred             cccchhhhhhcCCCCeEEEEEEE-cCCCcEEEEEEeecHHH--HHHHHHHHHHHHhCCCCcEeeeeeeeecCCcEEEEEe
Confidence            36899999999999999999994 56688999999875432  2222222233444577888888888888889999999


Q ss_pred             ecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeeccCCCCCcccCCe
Q 018699          127 YLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSGPWQDQGL  206 (351)
Q Consensus       127 ~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~~~~~~~~~~~  206 (351)
                      |+++++|.+++...   +..+++..+..++.|++.|+.|||+.+++|+||+|+||+++                 .++.+
T Consensus        79 ~~~~~~L~~~l~~~---~~~l~~~~~~~~~~~l~~~l~~lh~~~i~H~dl~~~ni~~~-----------------~~~~~  138 (256)
T cd06612          79 YCGAGSVSDIMKIT---NKTLTEEEIAAILYQTLKGLEYLHSNKKIHRDIKAGNILLN-----------------EEGQA  138 (256)
T ss_pred             cCCCCcHHHHHHhC---ccCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCcceEEEC-----------------CCCcE
Confidence            99999999998764   46789999999999999999999999999999999999999                 67789


Q ss_pred             EEeecCCccccccCCCCccccccccCCCcccceeccCCCCCccchHhHHHHHHHHHHhCccccccccCCCCCcee---ee
Q 018699          207 CLVDWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQEKKPWKFQVDTYGLCAIVHMMLHNSYMEIEKKASPDGGLV---YL  283 (351)
Q Consensus       207 ~l~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~p~~~~~~~~~~~~~---~~  283 (351)
                      +|+|||.+......  ........++..|+|||.+.+..++.++||||+|+++|+|++|..||............   ..
T Consensus       139 ~l~dfg~~~~~~~~--~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~s~G~il~~l~~g~~p~~~~~~~~~~~~~~~~~~  216 (256)
T cd06612         139 KLADFGVSGQLTDT--MAKRNTVIGTPFWMAPEVIQEIGYNNKADIWSLGITAIEMAEGKPPYSDIHPMRAIFMIPNKPP  216 (256)
T ss_pred             EEcccccchhcccC--ccccccccCCccccCHHHHhcCCCCchhhHHHHHHHHHHHHhCCCCCCCcchhhhhhhhccCCC
Confidence            99999988653321  11223345788999999998888899999999999999999999998754432111100   11


Q ss_pred             cCcchhhhhHHHHHHHHHHHHhcCCCCCChHHHHHHHHHH
Q 018699          284 PKLSFKRYWKVELWKSLFTNLLNMSSGNDKEVLQNLQKSF  323 (351)
Q Consensus       284 ~~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~~~~  323 (351)
                      .....+..++ ..+.++|.+||+.||++||++.|+|.|+|
T Consensus       217 ~~~~~~~~~~-~~~~~~i~~~l~~~P~~Rps~~~il~~~~  255 (256)
T cd06612         217 PTLSDPEKWS-PEFNDFVKKCLVKDPEERPSAIQLLQHPF  255 (256)
T ss_pred             CCCCchhhcC-HHHHHHHHHHHhcChhhCcCHHHHhcCCC
Confidence            1112233344 68999999999999999999999999986

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a

>cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases

Probab=100.00  E-value=3.3e-38  Score=281.46  Aligned_cols=271  Identities=15%  Similarity=0.138  Sum_probs=199.4

Q ss_pred             eeEEEEEEeeccCceEEEEEEecCCCCceEEEEecCCCCChH-HHHHHHHHhhhccccccccccceeeecccCeeEEEEE
Q 018699           48 KKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFPWE-FYMYRQLDQRISGRERSSFGFAHRIHLYSDYSILVCD  126 (351)
Q Consensus        48 ~~Y~i~~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~~~e-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e  126 (351)
                      ++|++.+.||+|+||+||+|. +..+++.||+|.+....... ...............+++++.....+...+..++|||
T Consensus         1 ~~~~~~~~ig~g~~g~v~~~~-~~~~~~~~a~k~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e   79 (286)
T cd06622           1 DEIEVLDELGKGNYGSVYKVL-HRPTGVTMAMKEIRLELDESKFNQIIMELDILHKAVSPYIVDFYGAFFIEGAVYMCME   79 (286)
T ss_pred             ChhhhhhhhcccCCeEEEEEE-EcCCCcEEEEEEeecccCHHHHHHHHHHHHHHHhcCCCcHHhhhhheecCCeEEEEEe
Confidence            468999999999999999999 46678999999886543221 1111122223334567778777777777889999999


Q ss_pred             ecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHH-CCceecCCCCCcEEEeecCCcceeeccCCCCCcccCC
Q 018699          127 YLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHD-VGIIHGDFKPDNLLIRYARDELTVLDHDRSGPWQDQG  205 (351)
Q Consensus       127 ~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~-~~i~H~dl~p~Nill~~~~~~~~~~~~~~~~~~~~~~  205 (351)
                      |+++++|..++.... ....+++..+..++.|++.|+.|||+ .||+|+||+|+||+++                 .++.
T Consensus        80 ~~~~~~l~~~~~~~~-~~~~~~~~~~~~~~~~i~~~l~~LH~~~~i~H~dl~p~nil~~-----------------~~~~  141 (286)
T cd06622          80 YMDAGSLDKLYAGGV-ATEGIPEDVLRRITYAVVKGLKFLKEEHNIIHRDVKPTNVLVN-----------------GNGQ  141 (286)
T ss_pred             ecCCCCHHHHHHhcc-ccCCCCHHHHHHHHHHHHHHHHHHHhcCCEeeCCCCHHHEEEC-----------------CCCC
Confidence            999999998887621 02378999999999999999999997 5999999999999999                 6778


Q ss_pred             eEEeecCCccccccCCCCccccccccCCCcccceeccCC------CCCccchHhHHHHHHHHHHhCccccccccCCCCCc
Q 018699          206 LCLVDWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQEKK------PWKFQVDTYGLCAIVHMMLHNSYMEIEKKASPDGG  279 (351)
Q Consensus       206 ~~l~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~------~~~~~~DiwslG~il~~l~~g~~p~~~~~~~~~~~  279 (351)
                      ++|+|||.+....    ........+++.|+|||.+.+.      .++.++|+|||||++|+|++|..||..........
T Consensus       142 ~~l~dfg~~~~~~----~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~  217 (286)
T cd06622         142 VKLCDFGVSGNLV----ASLAKTNIGCQSYMAPERIKSGGPNQNPTYTVQSDVWSLGLSILEMALGRYPYPPETYANIFA  217 (286)
T ss_pred             EEEeecCCccccc----CCccccCCCccCccCcchhcCCCCCccCCCCcccchHhHHHHHHHHHhCCCCCCCcchhhHHH
Confidence            9999999885432    1122334578899999998543      34789999999999999999999986433221000


Q ss_pred             ----eeeecCcchhhhhHHHHHHHHHHHHhcCCCCCChHHHHHHHHHHH-HHHhhChHHHHHHHHHHH
Q 018699          280 ----LVYLPKLSFKRYWKVELWKSLFTNLLNMSSGNDKEVLQNLQKSFQ-DYLCSNPQLLKNLKELLA  342 (351)
Q Consensus       280 ----~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~~~~~-~~~~~~~~~~~~~~~~~~  342 (351)
                          .........+..++ ..+.+||.+||..+|++||++.+++.|+|. .+-.....+...+.+.++
T Consensus       218 ~~~~~~~~~~~~~~~~~~-~~~~~li~~~l~~~p~~Rp~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~  284 (286)
T cd06622         218 QLSAIVDGDPPTLPSGYS-DDAQDFVAKCLNKIPNRRPTYAQLLEHPWLVKYKNADVDMAEWVTGALK  284 (286)
T ss_pred             HHHHHhhcCCCCCCcccC-HHHHHHHHHHcccCcccCCCHHHHhcChhhhhccCCccchHHHHHHHHh
Confidence                01112233343445 789999999999999999999999998774 344444444444444443

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3

Probab=100.00  E-value=3.7e-38  Score=280.23  Aligned_cols=245  Identities=17%  Similarity=0.213  Sum_probs=186.5

Q ss_pred             EeeccCceEEEEEEecCCCCceEEEEecCCCCCh----HHHHHH--HHHhhhccccccccccceeeecccCeeEEEEEec
Q 018699           55 CAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFPW----EFYMYR--QLDQRISGRERSSFGFAHRIHLYSDYSILVCDYL  128 (351)
Q Consensus        55 ~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~~~----e~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~  128 (351)
                      .||+|+||.||+|. +..+++.+|+|.+.+....    +...+.  .+........++++.........++..++||||+
T Consensus         1 ~lg~G~~g~Vy~~~-~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~   79 (279)
T cd05633           1 IIGRGGFGEVYGCR-KADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMTYAFHTPDKLCFILDLM   79 (279)
T ss_pred             CcccCCCeEEEEEE-ECCCCcEEEEEEEEccccccchHHHHHHHHHHHHHHHhhCCCCcEeEEEEEEecCCeEEEEEecC
Confidence            48999999999999 5677899999988654221    111111  1112222335566766666667778899999999


Q ss_pred             CCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeeccCCCCCcccCCeEE
Q 018699          129 SQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSGPWQDQGLCL  208 (351)
Q Consensus       129 ~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~~~~~~~~~~~~l  208 (351)
                      ++++|.+++..    ...+++..+..++.|++.|+.|||++||+|+||+|+||+++                 .++.++|
T Consensus        80 ~~~~L~~~i~~----~~~l~~~~~~~i~~qi~~al~~lH~~~ivH~dikp~Nil~~-----------------~~~~~~l  138 (279)
T cd05633          80 NGGDLHYHLSQ----HGVFSEKEMRFYATEIILGLEHMHNRFVVYRDLKPANILLD-----------------EHGHVRI  138 (279)
T ss_pred             CCCCHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHCCcCCCCCCHHHEEEC-----------------CCCCEEE
Confidence            99999998876    46799999999999999999999999999999999999998                 6778999


Q ss_pred             eecCCccccccCCCCccccccccCCCcccceecc-CCCCCccchHhHHHHHHHHHHhCccccccccCCCCC---ceeeec
Q 018699          209 VDWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQE-KKPWKFQVDTYGLCAIVHMMLHNSYMEIEKKASPDG---GLVYLP  284 (351)
Q Consensus       209 ~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~-~~~~~~~~DiwslG~il~~l~~g~~p~~~~~~~~~~---~~~~~~  284 (351)
                      +|||++.....    .......|+..|+|||.+. +..++.++||||+||++|+|++|..||.........   ......
T Consensus       139 ~dfg~~~~~~~----~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~  214 (279)
T cd05633         139 SDLGLACDFSK----KKPHASVGTHGYMAPEVLQKGTAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTV  214 (279)
T ss_pred             ccCCcceeccc----cCccCcCCCcCccCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcCCCCCcCHHHHHHHhhcC
Confidence            99998854321    1122346899999999986 456789999999999999999999999754322110   001112


Q ss_pred             CcchhhhhHHHHHHHHHHHHhcCCCCCCh-----HHHHHHHHHHHHH
Q 018699          285 KLSFKRYWKVELWKSLFTNLLNMSSGNDK-----EVLQNLQKSFQDY  326 (351)
Q Consensus       285 ~~~~~~~~~~~~~~~li~~~L~~dP~~R~-----s~~e~l~~~~~~~  326 (351)
                      ...++..++ ..+.++|.+||+.||.+|+     ++.++++|+|...
T Consensus       215 ~~~~~~~~~-~~~~~li~~~l~~~p~~R~~~~~~~~~~~~~h~~~~~  260 (279)
T cd05633         215 NVELPDSFS-PELKSLLEGLLQRDVSKRLGCLGRGAQEVKEHVFFKG  260 (279)
T ss_pred             CcCCccccC-HHHHHHHHHHhcCCHHHhcCCCCCCHHHHHhCccccC
Confidence            223344445 7899999999999999999     5999999997654

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi

>cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase

Probab=100.00  E-value=3.7e-38  Score=276.66  Aligned_cols=250  Identities=10%  Similarity=0.040  Sum_probs=189.4

Q ss_pred             CeeEEEEEEeeccCceEEEEEEecCCCCceEEEEecCCCCChHHHHHHHHHhhhccccccccccceeeecccCeeEEEEE
Q 018699           47 GKKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFPWEFYMYRQLDQRISGRERSSFGFAHRIHLYSDYSILVCD  126 (351)
Q Consensus        47 ~~~Y~i~~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e  126 (351)
                      .++|++.+.||+|+||.||+|.+  ..+..+|+|.+......+.....+ ...+....++++......+...+..++|||
T Consensus         3 ~~~~~~~~~lg~G~~~~vy~~~~--~~~~~~a~K~~~~~~~~~~~~~~e-~~~l~~l~h~~i~~~~~~~~~~~~~~iv~e   79 (256)
T cd05114           3 PSELTFMKELGSGQFGVVHLGKW--RAQIKVAIKAINEGAMSEEDFIEE-AKVMMKLSHPKLVQLYGVCTQQKPLYIVTE   79 (256)
T ss_pred             HHHcEEeeEecCCcCceEEEEEe--ccCceEEEEecccCCccHHHHHHH-HHHHHHCCCCCceeEEEEEccCCCEEEEEE
Confidence            35799999999999999999985  334679999877554433333332 223445567888888888888888999999


Q ss_pred             ecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeeccCCCCCcccCCe
Q 018699          127 YLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSGPWQDQGL  206 (351)
Q Consensus       127 ~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~~~~~~~~~~~  206 (351)
                      |+++++|.+++...   ...+++..+..++.|++.|+.|||++|++|+||+|+||+++                 .++.+
T Consensus        80 ~~~~~~L~~~~~~~---~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~ni~i~-----------------~~~~~  139 (256)
T cd05114          80 FMENGCLLNYLRQR---QGKLSKDMLLSMCQDVCEGMEYLERNSFIHRDLAARNCLVS-----------------STGVV  139 (256)
T ss_pred             cCCCCcHHHHHHhC---ccCCCHHHHHHHHHHHHHHHHHHHHCCccccccCcceEEEc-----------------CCCeE
Confidence            99999999998753   24688999999999999999999999999999999999998                 67789


Q ss_pred             EEeecCCccccccCCCCccccccccCCCcccceeccCCCCCccchHhHHHHHHHHHHh-CccccccccCCCCCcee-eec
Q 018699          207 CLVDWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQEKKPWKFQVDTYGLCAIVHMMLH-NSYMEIEKKASPDGGLV-YLP  284 (351)
Q Consensus       207 ~l~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~-g~~p~~~~~~~~~~~~~-~~~  284 (351)
                      +|+|||.+..... ..........++..|+|||.+.+..++.++|+||+|+++|+|++ |..||............ ...
T Consensus       140 kl~d~g~~~~~~~-~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~s~G~~l~el~~~g~~p~~~~~~~~~~~~i~~~~  218 (256)
T cd05114         140 KVSDFGMTRYVLD-DEYTSSSGAKFPVKWSPPEVFNFSKYSSKSDVWSFGVLMWEVFTEGKMPFEKKSNYEVVEMISRGF  218 (256)
T ss_pred             EECCCCCccccCC-CceeccCCCCCchhhCChhhcccCccchhhhhHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHCCC
Confidence            9999998864321 11111122234567999999988888999999999999999999 88898654322100000 011


Q ss_pred             CcchhhhhHHHHHHHHHHHHhcCCCCCChHHHHHHHH
Q 018699          285 KLSFKRYWKVELWKSLFTNLLNMSSGNDKEVLQNLQK  321 (351)
Q Consensus       285 ~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~~  321 (351)
                      ....+...+ ..+.+++.+||+.+|++||++.++++.
T Consensus       219 ~~~~~~~~~-~~~~~li~~c~~~~p~~Rps~~~l~~~  254 (256)
T cd05114         219 RLYRPKLAS-MTVYEVMYSCWHEKPEGRPTFAELLRA  254 (256)
T ss_pred             CCCCCCCCC-HHHHHHHHHHccCCcccCcCHHHHHHh
Confidence            112223333 778999999999999999999999863

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h

>cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases

Probab=100.00  E-value=1.4e-38  Score=282.97  Aligned_cols=258  Identities=12%  Similarity=0.063  Sum_probs=192.4

Q ss_pred             cCeeEEEEEEeeccCceEEEEEEecC----CCCceEEEEecCCCCChHH-HHHHHHHhhhccccccccccceeeecccCe
Q 018699           46 GGKKYQIKGCAGQGGFAKVFKAYVNG----DPEDVVALKIQKPAFPWEF-YMYRQLDQRISGRERSSFGFAHRIHLYSDY  120 (351)
Q Consensus        46 ~~~~Y~i~~~lg~G~~g~V~~a~~~~----~~~~~vaiK~~~~~~~~e~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  120 (351)
                      ..++|.+.+.||+|+||.||+|.+..    .+++.||+|.+......+. ..+......+....++++......+.....
T Consensus         3 ~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~   82 (280)
T cd05049           3 QRDTIVLKRELGEGAFGKVFLGECYHLEPENDKELVAVKTLKETASNDARKDFEREAELLTNFQHENIVKFYGVCTEGDP   82 (280)
T ss_pred             ChHHhhHHhhccccCCceEeeeeeccccCcCCcceEEEEeecccCCHHHHHHHHHHHHHHHhcCCCCchheeeEEecCCC
Confidence            45689999999999999999998522    3468899999876644421 122222233445567788888888888889


Q ss_pred             eEEEEEecCCCCHHHHHHHHHh----------hCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcc
Q 018699          121 SILVCDYLSQGTLQDAINSYVV----------IGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDEL  190 (351)
Q Consensus       121 ~~lv~e~~~~~sL~~~l~~~~~----------~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~  190 (351)
                      .++||||+++++|.+++.....          ....+++..+..++.|++.|+.+||++|++|+||+|+||+++      
T Consensus        83 ~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~i~h~dlkp~nili~------  156 (280)
T cd05049          83 PIMVFEYMEHGDLNKFLRSHGPDAAFLKSPDSPMGELTLSQLLQIAVQIASGMVYLASQHFVHRDLATRNCLVG------  156 (280)
T ss_pred             eEEEEecCCCCCHHHHHHhcCCchhhhcccccccccccHHHHHHHHHHHHHHHHHHhhCCeeccccccceEEEc------
Confidence            9999999999999999976411          123578889999999999999999999999999999999999      


Q ss_pred             eeeccCCCCCcccCCeEEeecCCccccccCCCCccccccccCCCcccceeccCCCCCccchHhHHHHHHHHHHh-Ccccc
Q 018699          191 TVLDHDRSGPWQDQGLCLVDWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQEKKPWKFQVDTYGLCAIVHMMLH-NSYME  269 (351)
Q Consensus       191 ~~~~~~~~~~~~~~~~~l~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~-g~~p~  269 (351)
                                 .++.++|+|||.+................++..|+|||.+.+..++.++|||||||++|+|++ |..||
T Consensus       157 -----------~~~~~kl~d~g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~e~~~~g~~p~  225 (280)
T cd05049         157 -----------YDLVVKIGDFGMSRDVYTTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVVLWEIFTYGKQPW  225 (280)
T ss_pred             -----------CCCeEEECCcccceecccCcceecCCCCcccceecChhhhccCCcchhhhHHHHHHHHHHHHhcCCCCC
Confidence                       678899999998864321111111122345678999999998889999999999999999998 99998


Q ss_pred             ccccCCCCCceee-ecCcchhhhhHHHHHHHHHHHHhcCCCCCChHHHHHHHH
Q 018699          270 IEKKASPDGGLVY-LPKLSFKRYWKVELWKSLFTNLLNMSSGNDKEVLQNLQK  321 (351)
Q Consensus       270 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~~  321 (351)
                      ............. ......+...+ ..+.++|.+||+.||++||++.|++..
T Consensus       226 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~li~~~l~~~p~~Rp~~~eil~~  277 (280)
T cd05049         226 YGLSNEEVIECITQGRLLQRPRTCP-SEVYDIMLGCWKRDPQQRINIKDIHER  277 (280)
T ss_pred             CCCCHHHHHHHHHcCCcCCCCCCCC-HHHHHHHHHHcCCCcccCCCHHHHHHH
Confidence            6543221000000 01111122333 789999999999999999999998764

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt

>cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors

Probab=100.00  E-value=2.8e-38  Score=281.43  Aligned_cols=257  Identities=13%  Similarity=0.088  Sum_probs=191.9

Q ss_pred             CeeEEEEEEeeccCceEEEEEEecCC----CCceEEEEecCCCCChHH-HHHHHHHhhhccccccccccceeeecccCee
Q 018699           47 GKKYQIKGCAGQGGFAKVFKAYVNGD----PEDVVALKIQKPAFPWEF-YMYRQLDQRISGRERSSFGFAHRIHLYSDYS  121 (351)
Q Consensus        47 ~~~Y~i~~~lg~G~~g~V~~a~~~~~----~~~~vaiK~~~~~~~~e~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  121 (351)
                      .++|++.+.||.|++|.||+|.+...    ....||+|.+........ ..+...........++++..........+..
T Consensus         4 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~v~~K~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~   83 (283)
T cd05048           4 LSAVRFLEELGEGAFGKVYKGELTGPNERLSATSVAIKTLKENAEPKVQQEFRQEAELMSDLQHPNIVCLLGVCTKEQPT   83 (283)
T ss_pred             hHHcchhhcccCccCCcEEEEEEecCCCCcceeeEEEEecccCCCHHHHHHHHHHHHHHHhcCCcccceEEEEEcCCCce
Confidence            45799999999999999999985221    236799999875433221 1122222233445677888888877777889


Q ss_pred             EEEEEecCCCCHHHHHHHHHhh------------CCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCc
Q 018699          122 ILVCDYLSQGTLQDAINSYVVI------------GKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDE  189 (351)
Q Consensus       122 ~lv~e~~~~~sL~~~l~~~~~~------------~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~  189 (351)
                      +++|||+++++|.+++......            ...++...++.++.|++.|+.|||++|++|+||+|+||+++     
T Consensus        84 ~~~~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~al~~lH~~~i~H~dlkp~Nil~~-----  158 (283)
T cd05048          84 CMLFEYLAHGDLHEFLVRNSPHSDVGAESGDETVKSSLDCSDFLHIAIQIAAGMEYLSSHHFVHRDLAARNCLVG-----  158 (283)
T ss_pred             EEEEecCCCCcHHHHHHhcCCCcccccccccccccCCCCHHHHHHHHHHHHHHHHHHHhCCeeccccccceEEEc-----
Confidence            9999999999999999764110            14578889999999999999999999999999999999999     


Q ss_pred             ceeeccCCCCCcccCCeEEeecCCccccccCCCCccccccccCCCcccceeccCCCCCccchHhHHHHHHHHHHh-Cccc
Q 018699          190 LTVLDHDRSGPWQDQGLCLVDWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQEKKPWKFQVDTYGLCAIVHMMLH-NSYM  268 (351)
Q Consensus       190 ~~~~~~~~~~~~~~~~~~l~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~-g~~p  268 (351)
                                  .++.++|+|||++................+++.|+|||.+.+..++.++|||||||++|+|++ |..|
T Consensus       159 ------------~~~~~~L~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDv~slG~il~el~~~g~~p  226 (283)
T cd05048         159 ------------EGLTVKISDFGLSRDIYSADYYRVQSKSLLPVRWMPPEAILYGKFTTESDIWSFGVVLWEIFSYGLQP  226 (283)
T ss_pred             ------------CCCcEEECCCcceeeccccccccccCCCcccccccCHHHhccCcCchhhhHHHHHHHHHHHHcCCCCC
Confidence                        677899999998864322111112233456788999999988889999999999999999997 9999


Q ss_pred             cccccCCCCCce-eeecCcchhhhhHHHHHHHHHHHHhcCCCCCChHHHHHHHH
Q 018699          269 EIEKKASPDGGL-VYLPKLSFKRYWKVELWKSLFTNLLNMSSGNDKEVLQNLQK  321 (351)
Q Consensus       269 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~~  321 (351)
                      |........... ........+...+ +.+.+|+.+||+.||++||++.+++++
T Consensus       227 ~~~~~~~~~~~~i~~~~~~~~~~~~~-~~~~~l~~~c~~~~p~~Rp~~~~i~~~  279 (283)
T cd05048         227 YYGFSNQEVIEMIRSRQLLPCPEDCP-ARVYALMIECWNEIPARRPRFKDIHTR  279 (283)
T ss_pred             CCCCCHHHHHHHHHcCCcCCCcccCC-HHHHHHHHHHccCChhhCcCHHHHHHH
Confidence            875433211100 0112222334444 889999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer

>cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5

Probab=100.00  E-value=3.2e-38  Score=281.26  Aligned_cols=249  Identities=19%  Similarity=0.221  Sum_probs=185.5

Q ss_pred             eEEEEEEeeccCceEEEEEEecCCCCceEEEEecCCCCChH---HHHHHHHHhhhccccccccccceeeecccCeeEEEE
Q 018699           49 KYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFPWE---FYMYRQLDQRISGRERSSFGFAHRIHLYSDYSILVC  125 (351)
Q Consensus        49 ~Y~i~~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~~~e---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~  125 (351)
                      +|++.+.||+|++|.||+|+ +..+|+.||+|.+......+   .....++ .......|+++..........+..++|+
T Consensus         1 ~y~~~~~l~~g~~~~vy~~~-~~~~g~~~~~k~~~~~~~~~~~~~~~~~ei-~~l~~l~h~~i~~~~~~~~~~~~~~lv~   78 (284)
T cd07839           1 KYEKLEKIGEGTYGTVFKAK-NRETHEIVALKRVRLDDDDEGVPSSALREI-CLLKELKHKNIVRLYDVLHSDKKLTLVF   78 (284)
T ss_pred             CceeEEEecccCCeEEEEEE-ECCCCcEEEEEEeecccccccCccchhHHH-HHHHhcCCCCeeeHHHHhccCCceEEEE
Confidence            59999999999999999999 56778999999886432211   1111121 2223345677777777777788999999


Q ss_pred             EecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeeccCCCCCcccCC
Q 018699          126 DYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSGPWQDQG  205 (351)
Q Consensus       126 e~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~~~~~~~~~~  205 (351)
                      ||+. ++|.+++...   +..+++..++.++.||+.|+.|||++|++|+||+|+||+++                 .++.
T Consensus        79 e~~~-~~l~~~~~~~---~~~~~~~~~~~~~~qi~~al~~LH~~~i~H~dl~~~nil~~-----------------~~~~  137 (284)
T cd07839          79 EYCD-QDLKKYFDSC---NGDIDPEIVKSFMFQLLKGLAFCHSHNVLHRDLKPQNLLIN-----------------KNGE  137 (284)
T ss_pred             ecCC-CCHHHHHHhc---CCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHEEEc-----------------CCCc
Confidence            9995 6888877654   46789999999999999999999999999999999999999                 6778


Q ss_pred             eEEeecCCccccccCCCCccccccccCCCcccceeccCC-CCCccchHhHHHHHHHHHHhCccccccccCCCC-------
Q 018699          206 LCLVDWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQEKK-PWKFQVDTYGLCAIVHMMLHNSYMEIEKKASPD-------  277 (351)
Q Consensus       206 ~~l~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~-~~~~~~DiwslG~il~~l~~g~~p~~~~~~~~~-------  277 (351)
                      ++|+|||++.....  .........++..|+|||.+.+. .++.++|||||||++|+|++|..|+........       
T Consensus       138 ~~l~dfg~~~~~~~--~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~tg~~p~~~~~~~~~~~~~~~~  215 (284)
T cd07839         138 LKLADFGLARAFGI--PVRCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFR  215 (284)
T ss_pred             EEECccchhhccCC--CCCCcCCCccccCCcChHHHhCCcccCcHHHHHHHHHHHHHHHhcCCCCcCCCCHHHHHHHHHH
Confidence            99999998864321  11223344678899999998664 468999999999999999999988643221000       


Q ss_pred             ----------------CceeeecCc-------chhhhhHHHHHHHHHHHHhcCCCCCChHHHHHHHHHH
Q 018699          278 ----------------GGLVYLPKL-------SFKRYWKVELWKSLFTNLLNMSSGNDKEVLQNLQKSF  323 (351)
Q Consensus       278 ----------------~~~~~~~~~-------~~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~~~~  323 (351)
                                      ......+..       ......+ +.+++||.+||+.||.+|||+.+++.|+|
T Consensus       216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~li~~~l~~~P~~R~t~~~il~h~~  283 (284)
T cd07839         216 LLGTPTEESWPGVSKLPDYKPYPMYPATTSLVNVVPKLN-STGRDLLQNLLVCNPVQRISAEEALQHPY  283 (284)
T ss_pred             HhCCCChHHhHHhhhcccccccCCCCCcchhhhhcccCC-HHHHHHHHHHhcCChhhcCCHHHHhcCCC
Confidence                            000000000       0001123 77899999999999999999999999986

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also

>cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6

Probab=100.00  E-value=9.1e-38  Score=275.75  Aligned_cols=253  Identities=15%  Similarity=0.106  Sum_probs=192.2

Q ss_pred             eeEEEEEEeeccCceEEEEEEecCCCCceEEEEecCCCCChHHHH---HHHHHhhhccccccccccceeeecccCeeEEE
Q 018699           48 KKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFPWEFYM---YRQLDQRISGRERSSFGFAHRIHLYSDYSILV  124 (351)
Q Consensus        48 ~~Y~i~~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~~~e~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv  124 (351)
                      ++|++.+.||+|+||.||+|+ ...+++.||||.+..........   ............|+++..........+..+++
T Consensus         2 ~~~~i~~~l~~g~~~~v~~~~-~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v   80 (267)
T cd08228           2 ANFQIEKKIGRGQFSEVYRAT-CLLDRKPVALKKVQIFEMMDAKARQDCVKEIDLLKQLNHPNVIKYLDSFIEDNELNIV   80 (267)
T ss_pred             cceeeeeeeccCCCeeEEEEE-EeCCCCEEEEEEeeccccCCHHHHHHHHHHHHHHHhCCCcceeeeeeeEEECCeEEEE
Confidence            589999999999999999999 46678999999875422211111   11112233445677888888777778899999


Q ss_pred             EEecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeeccCCCCCcccC
Q 018699          125 CDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSGPWQDQ  204 (351)
Q Consensus       125 ~e~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~~~~~~~~~  204 (351)
                      +||+++++|.+++......+..+++..+..++.|++.|+.|||++|++|+||+|+||+++                 .++
T Consensus        81 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~~~nil~~-----------------~~~  143 (267)
T cd08228          81 LELADAGDLSQMIKYFKKQKRLIPERTVWKYFVQLCSAVEHMHSRRVMHRDIKPANVFIT-----------------ATG  143 (267)
T ss_pred             EEecCCCcHHHHHHHhhhccCCCCHHHHHHHHHHHHHHHHHHhhCCeeCCCCCHHHEEEc-----------------CCC
Confidence            999999999999876543345689999999999999999999999999999999999998                 677


Q ss_pred             CeEEeecCCccccccCCCCccccccccCCCcccceeccCCCCCccchHhHHHHHHHHHHhCccccccccCCCCC--ce-e
Q 018699          205 GLCLVDWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQEKKPWKFQVDTYGLCAIVHMMLHNSYMEIEKKASPDG--GL-V  281 (351)
Q Consensus       205 ~~~l~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~p~~~~~~~~~~--~~-~  281 (351)
                      .++|+|||.+......  ........+++.|+|||.+.+..++.++|+||+|+++|+|++|..||.........  .. .
T Consensus       144 ~~~l~d~g~~~~~~~~--~~~~~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~p~~~~~~~~~~~~~~~~  221 (267)
T cd08228         144 VVKLGDLGLGRFFSSK--TTAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLFSLCQKIE  221 (267)
T ss_pred             CEEECccccceeccch--hHHHhcCCCCccccChhhhccCCCCchhhHHHHHHHHHHHhcCCCCCccccccHHHHHHHHh
Confidence            7999999987643211  11123346788999999998888899999999999999999999998654321000  00 0


Q ss_pred             eecCcchh-hhhHHHHHHHHHHHHhcCCCCCChHHHHHHHH
Q 018699          282 YLPKLSFK-RYWKVELWKSLFTNLLNMSSGNDKEVLQNLQK  321 (351)
Q Consensus       282 ~~~~~~~~-~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~~  321 (351)
                      .....+.+ ...+ ..+.++|.+||+.+|++||++.++++.
T Consensus       222 ~~~~~~~~~~~~~-~~~~~li~~cl~~~p~~Rp~~~~vl~~  261 (267)
T cd08228         222 QCDYPPLPTEHYS-EKLRELVSMCIYPDPDQRPDIGYVHQI  261 (267)
T ss_pred             cCCCCCCChhhcC-HHHHHHHHHHCCCCcccCcCHHHHHHH
Confidence            00111111 2223 779999999999999999999999875

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase

>cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like

Probab=100.00  E-value=5.1e-38  Score=279.99  Aligned_cols=251  Identities=18%  Similarity=0.199  Sum_probs=188.1

Q ss_pred             eEEEEEEeeccCceEEEEEEecCCCCceEEEEecCCCCChH---HHHHHHHHhhhccccccccccceeeecccCeeEEEE
Q 018699           49 KYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFPWE---FYMYRQLDQRISGRERSSFGFAHRIHLYSDYSILVC  125 (351)
Q Consensus        49 ~Y~i~~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~~~e---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~  125 (351)
                      +|++.+.||.|++|+||+|+ +..+++.||+|++......+   .....+ ........|+++.........++..|+||
T Consensus         1 ~y~~~~~l~~g~~~~v~~~~-~~~~~~~~~ik~~~~~~~~~~~~~~~~~e-~~~l~~l~h~~i~~~~~~~~~~~~~~~v~   78 (285)
T cd07861           1 DYTKIEKIGEGTYGVVYKGR-NKKTGQIVAMKKIRLESEEEGVPSTAIRE-ISLLKELQHPNIVCLQDVLMQESRLYLIF   78 (285)
T ss_pred             CceEeeEecccCceEEEEEE-ECCCCcEEEEEEeccccccCCchHHHHHH-HHHHHhcCCCCEeeeEEEEeeCCeEEEEE
Confidence            48999999999999999999 56778999999986542221   111222 22233445788888888888889999999


Q ss_pred             EecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeeccCCCCCcccCC
Q 018699          126 DYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSGPWQDQG  205 (351)
Q Consensus       126 e~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~~~~~~~~~~  205 (351)
                      ||++ ++|.+++..... +..+++..++.++.|++.||.|||++|++|+||+|+||+++                 .++.
T Consensus        79 e~~~-~~l~~~~~~~~~-~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dl~p~nil~~-----------------~~~~  139 (285)
T cd07861          79 EFLS-MDLKKYLDSLPK-GQYMDAELVKSYLYQILQGILFCHSRRVLHRDLKPQNLLID-----------------NKGV  139 (285)
T ss_pred             ecCC-CCHHHHHhcCCC-CCcCCHHHHHHHHHHHHHHHHHHHhCCeeecCCCHHHEEEc-----------------CCCc
Confidence            9995 689888865321 35789999999999999999999999999999999999998                 7788


Q ss_pred             eEEeecCCccccccCCCCccccccccCCCcccceeccC-CCCCccchHhHHHHHHHHHHhCccccccccCCCC-------
Q 018699          206 LCLVDWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQEK-KPWKFQVDTYGLCAIVHMMLHNSYMEIEKKASPD-------  277 (351)
Q Consensus       206 ~~l~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~~DiwslG~il~~l~~g~~p~~~~~~~~~-------  277 (351)
                      ++|+|||++.....  .........+++.|+|||.+.+ ..++.++|||||||++|+|++|.+||........       
T Consensus       140 ~~l~dfg~~~~~~~--~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~~~~~~~~~~~~~~~~~~  217 (285)
T cd07861         140 IKLADFGLARAFGI--PVRVYTHEVVTLWYRAPEVLLGSPRYSTPVDIWSIGTIFAEMATKKPLFHGDSEIDQLFRIFRI  217 (285)
T ss_pred             EEECcccceeecCC--CcccccCCcccccccChHHhcCCCCcCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHH
Confidence            99999998864321  1122233456889999998865 4568899999999999999999999864322100       


Q ss_pred             ------Ccee-------------eecCc---chhhhhHHHHHHHHHHHHhcCCCCCChHHHHHHHHHH
Q 018699          278 ------GGLV-------------YLPKL---SFKRYWKVELWKSLFTNLLNMSSGNDKEVLQNLQKSF  323 (351)
Q Consensus       278 ------~~~~-------------~~~~~---~~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~~~~  323 (351)
                            ..+.             .....   ......+ +.+.++|.+||+.||++||++.+++.|+|
T Consensus       218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~li~~~l~~dP~~Rpt~~~ll~~~~  284 (285)
T cd07861         218 LGTPTEDVWPGVTSLPDYKNTFPKWKKGSLRSAVKNLD-EDGLDLLEKMLIYDPAKRISAKKALNHPY  284 (285)
T ss_pred             hCCCChhhhhcchhhHHHHhhccccCcchhHHhcCCCC-HHHHHHHHHHhcCChhhCCCHHHHhcCCC
Confidence                  0000             00000   0001123 67889999999999999999999999976

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2

>cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase

Probab=100.00  E-value=9.4e-38  Score=279.63  Aligned_cols=256  Identities=21%  Similarity=0.201  Sum_probs=197.6

Q ss_pred             CeeEEEEEEeeccCceEEEEEEecCCCCceEEEEecCCCCChHHHHHHHHHhhhccccccccccceeeecccCeeEEEEE
Q 018699           47 GKKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFPWEFYMYRQLDQRISGRERSSFGFAHRIHLYSDYSILVCD  126 (351)
Q Consensus        47 ~~~Y~i~~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e  126 (351)
                      .++|++.+.||+|+||+||+|. +..+++.|++|.+......................|+++....+.+...+..|+|+|
T Consensus        18 ~~~~~~~~~lg~g~~g~v~~~~-~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~lv~e   96 (293)
T cd06647          18 KKKYTRFEKIGQGASGTVYTAI-DVATGQEVAIKQMNLQQQPKKELIINEILVMRENKHPNIVNYLDSYLVGDELWVVME   96 (293)
T ss_pred             hhhceeeeEecCCCCeEEEEEE-EcCCCCEEEEEEeccccchHHHHHHHHHHHHhhcCCCCeeehhheeeeCCcEEEEEe
Confidence            4799999999999999999998 566788999999864433322222222223445567888888887777889999999


Q ss_pred             ecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeeccCCCCCcccCCe
Q 018699          127 YLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSGPWQDQGL  206 (351)
Q Consensus       127 ~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~~~~~~~~~~~  206 (351)
                      |+++++|.+++..     ..+++..+..++.|++.|++|||++|++|+||+|+||+++                 .++.+
T Consensus        97 ~~~~~~L~~~~~~-----~~l~~~~~~~i~~~l~~al~~LH~~gi~H~dL~p~Nili~-----------------~~~~~  154 (293)
T cd06647          97 YLAGGSLTDVVTE-----TCMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLG-----------------MDGSV  154 (293)
T ss_pred             cCCCCcHHHHHhh-----cCCCHHHHHHHHHHHHHHHHHHHhCCEeeccCCHHHEEEc-----------------CCCCE
Confidence            9999999999875     3578889999999999999999999999999999999998                 67789


Q ss_pred             EEeecCCccccccCCCCccccccccCCCcccceeccCCCCCccchHhHHHHHHHHHHhCccccccccCCCCCceee-e--
Q 018699          207 CLVDWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQEKKPWKFQVDTYGLCAIVHMMLHNSYMEIEKKASPDGGLVY-L--  283 (351)
Q Consensus       207 ~l~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~p~~~~~~~~~~~~~~-~--  283 (351)
                      +|+|||.+.....  .........+++.|+|||.+.+..++.++|+||+||++|++++|..||............. .  
T Consensus       155 kL~dfg~~~~~~~--~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~ll~~ll~g~~pf~~~~~~~~~~~~~~~~~  232 (293)
T cd06647         155 KLTDFGFCAQITP--EQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLIATNGT  232 (293)
T ss_pred             EEccCcceecccc--cccccccccCChhhcCchhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChhhheeehhcCCC
Confidence            9999998754321  1222333467888999999988888999999999999999999999997654431111110 1  


Q ss_pred             cCcchhhhhHHHHHHHHHHHHhcCCCCCChHHHHHHHHHHHHHHh
Q 018699          284 PKLSFKRYWKVELWKSLFTNLLNMSSGNDKEVLQNLQKSFQDYLC  328 (351)
Q Consensus       284 ~~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~~~~~~~~~  328 (351)
                      +....+...+ ..++++|.+||+.+|++||++.+++.|+|.....
T Consensus       233 ~~~~~~~~~~-~~l~~li~~~l~~~p~~Rp~~~~il~h~~~~~~~  276 (293)
T cd06647         233 PELQNPEKLS-AIFRDFLNRCLEMDVEKRGSAKELLQHPFLKIAK  276 (293)
T ss_pred             CCCCCccccC-HHHHHHHHHHccCChhhCcCHHHHhcCHHHhcCc
Confidence            1111122223 6789999999999999999999999998765433

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi

>cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor

Probab=100.00  E-value=2.8e-38  Score=280.69  Aligned_cols=259  Identities=13%  Similarity=0.091  Sum_probs=189.0

Q ss_pred             EEcCeeEEEEEEeeccCceEEEEEEecC----CCCceEEEEecCCCCCh-H-HHHHHHHHhhhccccccccccceeeecc
Q 018699           44 EIGGKKYQIKGCAGQGGFAKVFKAYVNG----DPEDVVALKIQKPAFPW-E-FYMYRQLDQRISGRERSSFGFAHRIHLY  117 (351)
Q Consensus        44 ~i~~~~Y~i~~~lg~G~~g~V~~a~~~~----~~~~~vaiK~~~~~~~~-e-~~~~~~~~~~~~~~~~~~~~~~~~~~~~  117 (351)
                      .+..++|++.+.||+|++|.||+|.+..    .++..||+|++...... . .....++ .......+++++....+...
T Consensus         2 ~~~~~~~~~~~~ig~G~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~-~~l~~l~~~~iv~~~~~~~~   80 (277)
T cd05062           2 EVAREKITMSRELGQGSFGMVYEGIAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEA-SVMKEFNCHHVVRLLGVVSQ   80 (277)
T ss_pred             cccHHHceeeeeeccccCCeEEEEEeccCCCCCceeEEEEEeccccCCHHHHHHHHHHH-HHHHhCCCCCeeeEEEEEcC
Confidence            3457889999999999999999998532    34578999998643221 1 1122222 23334567788888888877


Q ss_pred             cCeeEEEEEecCCCCHHHHHHHHHhh------CCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcce
Q 018699          118 SDYSILVCDYLSQGTLQDAINSYVVI------GKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELT  191 (351)
Q Consensus       118 ~~~~~lv~e~~~~~sL~~~l~~~~~~------~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~  191 (351)
                      +...++||||+++++|.+++......      ...++...+..++.|++.|+.|||+.|++|+||||+||+++       
T Consensus        81 ~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~~vH~dlkp~Nil~~-------  153 (277)
T cd05062          81 GQPTLVIMELMTRGDLKSYLRSLRPEMENNPVQAPPSLKKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVA-------  153 (277)
T ss_pred             CCCeEEEEecCCCCCHHHHHHHcCccccccccccCCCHHHHHHHHHHHHHHHHHHHHCCcccCCcchheEEEc-------
Confidence            88899999999999999998763210      12356778899999999999999999999999999999999       


Q ss_pred             eeccCCCCCcccCCeEEeecCCccccccCCCCccccccccCCCcccceeccCCCCCccchHhHHHHHHHHHHh-Cccccc
Q 018699          192 VLDHDRSGPWQDQGLCLVDWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQEKKPWKFQVDTYGLCAIVHMMLH-NSYMEI  270 (351)
Q Consensus       192 ~~~~~~~~~~~~~~~~l~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~-g~~p~~  270 (351)
                                .++.++|+|||++................+++.|+|||.+.+..++.++|||||||++|+|++ |..||.
T Consensus       154 ----------~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~p~~  223 (277)
T cd05062         154 ----------EDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQ  223 (277)
T ss_pred             ----------CCCCEEECCCCCccccCCcceeecCCCCccCHhhcChhHhhcCCcCchhHHHHHHHHHHHHHcCCCCCCC
Confidence                      677899999998864321111111112244678999999988889999999999999999998 677876


Q ss_pred             cccCCCCCce-eeecCcchhhhhHHHHHHHHHHHHhcCCCCCChHHHHHHHH
Q 018699          271 EKKASPDGGL-VYLPKLSFKRYWKVELWKSLFTNLLNMSSGNDKEVLQNLQK  321 (351)
Q Consensus       271 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~~  321 (351)
                      .......... ........+...+ +.+.++|.+||+.||++||++.+++.+
T Consensus       224 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~li~~~l~~~p~~Rps~~e~l~~  274 (277)
T cd05062         224 GMSNEQVLRFVMEGGLLDKPDNCP-DMLFELMRMCWQYNPKMRPSFLEIISS  274 (277)
T ss_pred             CCCHHHHHHHHHcCCcCCCCCCCC-HHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence            4332110000 0011112223333 779999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh

>cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha

Probab=100.00  E-value=5.5e-38  Score=285.48  Aligned_cols=254  Identities=13%  Similarity=0.137  Sum_probs=187.6

Q ss_pred             EEEEeecc--CceEEEEEEecCCCCceEEEEecCCCCCh-H-HHHHHHHHhhhccccccccccceeeecccCeeEEEEEe
Q 018699           52 IKGCAGQG--GFAKVFKAYVNGDPEDVVALKIQKPAFPW-E-FYMYRQLDQRISGRERSSFGFAHRIHLYSDYSILVCDY  127 (351)
Q Consensus        52 i~~~lg~G--~~g~V~~a~~~~~~~~~vaiK~~~~~~~~-e-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~  127 (351)
                      +.++||+|  ++++||++. +..+|+.||+|.+...... + ...+...........|++++....++..++..++||||
T Consensus         2 ~~~~ig~G~~~~~~v~~~~-~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~   80 (327)
T cd08227           2 LLTVIGRGFEDLMTVNLAR-YKPTGEYVTVRRINLEACTNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELWVVTSF   80 (327)
T ss_pred             hhhhccccccceEEEEEEe-ecccCcEEEEEEechhhccHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEECCEEEEEEec
Confidence            56789999  678999999 5788999999998765322 1 12222222334445788898888888888999999999


Q ss_pred             cCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeeccCCCCCcccCCeE
Q 018699          128 LSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSGPWQDQGLC  207 (351)
Q Consensus       128 ~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~~~~~~~~~~~~  207 (351)
                      +++++|.+++....  ...+++..++.++.|++.||.|||++||+|+||||+||+++                 .++.++
T Consensus        81 ~~~~~l~~~~~~~~--~~~l~~~~~~~i~~qi~~~L~~LH~~~iiH~dlkp~Nil~~-----------------~~~~~~  141 (327)
T cd08227          81 MAYGSAKDLICTHF--MDGMSELAIAYILQGVLKALDYIHHMGYVHRSVKASHILIS-----------------VDGKVY  141 (327)
T ss_pred             cCCCcHHHHHHhhc--cCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCChhhEEEe-----------------cCCcEE
Confidence            99999999997642  34589999999999999999999999999999999999999                 667789


Q ss_pred             EeecCCccccccCCCCc-----cccccccCCCcccceeccC--CCCCccchHhHHHHHHHHHHhCccccccccCCC----
Q 018699          208 LVDWGRGIDLHLFPDNM-----EFEGDCRTSGFRCIEMQEK--KPWKFQVDTYGLCAIVHMMLHNSYMEIEKKASP----  276 (351)
Q Consensus       208 l~Dfg~a~~~~~~~~~~-----~~~~~~g~~~y~aPE~~~~--~~~~~~~DiwslG~il~~l~~g~~p~~~~~~~~----  276 (351)
                      ++||+............     ......++..|+|||.+.+  ..++.++||||+||++|+|++|..||.......    
T Consensus       142 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~  221 (327)
T cd08227         142 LSGLRSNLSMINHGQRLRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQMLLE  221 (327)
T ss_pred             EcccchhhccccccccccccccccccccceecccChHHhhcccCCCCchhhHHHHHHHHHHHHHCCCCCCCcchhHHHHH
Confidence            99998653322111110     0112245677999999865  468899999999999999999999986321100    


Q ss_pred             --CCcee--------------e--------------------------ecCcchhhhhHHHHHHHHHHHHhcCCCCCChH
Q 018699          277 --DGGLV--------------Y--------------------------LPKLSFKRYWKVELWKSLFTNLLNMSSGNDKE  314 (351)
Q Consensus       277 --~~~~~--------------~--------------------------~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~s  314 (351)
                        .+...              .                          ....+....++ +.+.+||.+||..||++|||
T Consensus       222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~li~~~l~~dP~~Rpt  300 (327)
T cd08227         222 KLNGTVPCLLDTTTIPAEELTMKPSRSGANSGLGESTTVSTPRPSNGESSSHPYNRTFS-PHFHHFVEQCLQRNPDARPS  300 (327)
T ss_pred             HhcCCccccccccchhhhhcccCCcccCCcCCCCcccccCCcCccccCCcccccccccC-HHHHHHHHHHHhhCchhcCC
Confidence              00000              0                          00000111123 67899999999999999999


Q ss_pred             HHHHHHHHHHHH
Q 018699          315 VLQNLQKSFQDY  326 (351)
Q Consensus       315 ~~e~l~~~~~~~  326 (351)
                      +.++++|||..-
T Consensus       301 ~~ell~~p~f~~  312 (327)
T cd08227         301 ASTLLNHSFFKQ  312 (327)
T ss_pred             HHHHhcChhhhh
Confidence            999999987543

Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype

>cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C

Probab=100.00  E-value=4.6e-38  Score=281.38  Aligned_cols=259  Identities=12%  Similarity=0.050  Sum_probs=193.8

Q ss_pred             EcCeeEEEEEEeeccCceEEEEEEec----CCCCceEEEEecCCCCChHHHHHHHHHhhhccccccccccceeeecccCe
Q 018699           45 IGGKKYQIKGCAGQGGFAKVFKAYVN----GDPEDVVALKIQKPAFPWEFYMYRQLDQRISGRERSSFGFAHRIHLYSDY  120 (351)
Q Consensus        45 i~~~~Y~i~~~lg~G~~g~V~~a~~~----~~~~~~vaiK~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  120 (351)
                      +..++|.+.+.||+|+||.||+|.+.    ..++..+++|.+..........+......+....++++..........+.
T Consensus         2 ~~~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~   81 (291)
T cd05094           2 IKRRDIVLKRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEHIVKFYGVCGDGDP   81 (291)
T ss_pred             CchHHeEEeeeecccCCCeEEEeEeeccCCCCcceeeEEEecCCccHHHHHHHHHHHHHHhcCCCCCcceEEEEEccCCc
Confidence            34578999999999999999999852    23456789999876544333333333344556678888888888888889


Q ss_pred             eEEEEEecCCCCHHHHHHHHHh------------hCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCC
Q 018699          121 SILVCDYLSQGTLQDAINSYVV------------IGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARD  188 (351)
Q Consensus       121 ~~lv~e~~~~~sL~~~l~~~~~------------~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~  188 (351)
                      .++||||+++++|.+++.....            ....+++..++.++.||+.|++|||++||+|+||+|+||+++    
T Consensus        82 ~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~i~H~dlkp~Nil~~----  157 (291)
T cd05094          82 LIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQIASGMVYLASQHFVHRDLATRNCLVG----  157 (291)
T ss_pred             eEEEEecCCCCcHHHHHHhcCcccccccccccccCcCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCcceEEEc----
Confidence            9999999999999999976320            013478899999999999999999999999999999999999    


Q ss_pred             cceeeccCCCCCcccCCeEEeecCCccccccCCCCccccccccCCCcccceeccCCCCCccchHhHHHHHHHHHHh-Ccc
Q 018699          189 ELTVLDHDRSGPWQDQGLCLVDWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQEKKPWKFQVDTYGLCAIVHMMLH-NSY  267 (351)
Q Consensus       189 ~~~~~~~~~~~~~~~~~~~l~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~-g~~  267 (351)
                                   .++.++|+|||.+................++..|+|||.+.+..++.++|||||||++|+|++ |..
T Consensus       158 -------------~~~~~~l~dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~  224 (291)
T cd05094         158 -------------ANLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVILWEIFTYGKQ  224 (291)
T ss_pred             -------------cCCcEEECCCCcccccCCCceeecCCCCCcceeecChHHhccCCCCchhhHHHHHHHHHHHHhCCCC
Confidence                         677899999998864322111111223346778999999988888999999999999999998 999


Q ss_pred             ccccccCCCCCceee-ecCcchhhhhHHHHHHHHHHHHhcCCCCCChHHHHHHHH
Q 018699          268 MEIEKKASPDGGLVY-LPKLSFKRYWKVELWKSLFTNLLNMSSGNDKEVLQNLQK  321 (351)
Q Consensus       268 p~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~~  321 (351)
                      ||............. ......+...+ ..+.+++.+||+.||++||++.+++..
T Consensus       225 p~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~li~~~l~~~P~~Rpt~~~v~~~  278 (291)
T cd05094         225 PWFQLSNTEVIECITQGRVLERPRVCP-KEVYDIMLGCWQREPQQRLNIKEIYKI  278 (291)
T ss_pred             CCCCCCHHHHHHHHhCCCCCCCCccCC-HHHHHHHHHHcccChhhCcCHHHHHHH
Confidence            986543210000000 01111122233 678999999999999999999998754

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n

>cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase

Probab=100.00  E-value=1.1e-37  Score=278.04  Aligned_cols=250  Identities=19%  Similarity=0.231  Sum_probs=190.1

Q ss_pred             eEEEEEEeeccCceEEEEEEecCCCCceEEEEecCCCCChH---HHHHHHHHhhhccccccccccceeeecccCeeEEEE
Q 018699           49 KYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFPWE---FYMYRQLDQRISGRERSSFGFAHRIHLYSDYSILVC  125 (351)
Q Consensus        49 ~Y~i~~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~~~e---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~  125 (351)
                      +|++.+.||.|++|.||+|. +..+|+.||+|++.......   .....+ ........++++.....+...+...++|+
T Consensus         1 ~y~~~~~l~~g~~~~v~~~~-~~~~~~~~~vK~~~~~~~~~~~~~~~~~e-~~~l~~~~~~~i~~~~~~~~~~~~~~~v~   78 (286)
T cd07832           1 RYKILGRIGEGAHGIVFKAK-DRETGETVALKKVALRRLEGGIPNQALRE-IKALQACQHPYVVKLLDVFPHGSGFVLVM   78 (286)
T ss_pred             CceEEeecccCCCcEEEEEE-ECCCCceEEEEEEEcccccchhhHHHHHH-HHHHHhCCCCCCcceeeEEecCCeeEEEe
Confidence            59999999999999999999 46678999999987543211   122222 22233445788888888888889999999


Q ss_pred             EecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeeccCCCCCcccCC
Q 018699          126 DYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSGPWQDQG  205 (351)
Q Consensus       126 e~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~~~~~~~~~~  205 (351)
                      ||+ +++|.+++...   ...+++..++.++.|++.|+.|||+.|++|+||+|+||+++                 .++.
T Consensus        79 e~~-~~~L~~~~~~~---~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~ni~~~-----------------~~~~  137 (286)
T cd07832          79 EYM-PSDLSEVLRDE---ERPLPEAQVKSYMRMLLKGVAYMHANGIMHRDLKPANLLIS-----------------ADGV  137 (286)
T ss_pred             ccc-CCCHHHHHHhc---CCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCcCHHHEEEc-----------------CCCc
Confidence            999 99999998764   46789999999999999999999999999999999999999                 6778


Q ss_pred             eEEeecCCccccccCCCCccccccccCCCcccceeccC-CCCCccchHhHHHHHHHHHHhCccccccccCCCC-------
Q 018699          206 LCLVDWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQEK-KPWKFQVDTYGLCAIVHMMLHNSYMEIEKKASPD-------  277 (351)
Q Consensus       206 ~~l~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~~DiwslG~il~~l~~g~~p~~~~~~~~~-------  277 (351)
                      ++|+|||.+....... ........++..|+|||.+.+ ..++.++||||+||++|+|++|.+||........       
T Consensus       138 ~~l~dfg~~~~~~~~~-~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~~~~~~~~~~~  216 (286)
T cd07832         138 LKIADFGLARLFSEEE-PRLYSHQVATRWYRAPELLYGARKYDPGVDLWAVGCIFAELLNGSPLFPGENDIEQLAIVFRT  216 (286)
T ss_pred             EEEeeeeecccccCCC-CCccccccCcccccCceeeeccccCCchhHHHHHHHHHHHHHcCCcCcCCCCHHHHHHHHHHH
Confidence            9999999886543211 112334568889999999865 4468999999999999999999877753321000       


Q ss_pred             ------------------Cceeee--cCcchhh---hhHHHHHHHHHHHHhcCCCCCChHHHHHHHHHH
Q 018699          278 ------------------GGLVYL--PKLSFKR---YWKVELWKSLFTNLLNMSSGNDKEVLQNLQKSF  323 (351)
Q Consensus       278 ------------------~~~~~~--~~~~~~~---~~~~~~~~~li~~~L~~dP~~R~s~~e~l~~~~  323 (351)
                                        ......  .......   ..+ ..+.+||.+||++||++||++.++++|+|
T Consensus       217 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~li~~~l~~~p~~R~~~~~~l~h~~  284 (286)
T cd07832         217 LGTPNEETWPGLTSLPDYNKITFPESKPIPLEEIFPDAS-PEALDLLKGLLVYDPSKRLSAAEALRHPY  284 (286)
T ss_pred             cCCCChHHHhhccCcchhhcccCCCCCcchHHHhCCCcc-HHHHHHHHHHhccChhhCCCHHHHhhCcC
Confidence                              000000  0000111   112 78899999999999999999999999986

Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea

>cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1

Probab=100.00  E-value=1.7e-38  Score=279.09  Aligned_cols=249  Identities=16%  Similarity=0.193  Sum_probs=197.9

Q ss_pred             eEEEEEEeeccCceEEEEEEecCCCCceEEEEecCCCCCh---HHHHHHHHHhhhccccccccccceeeecccCeeEEEE
Q 018699           49 KYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFPW---EFYMYRQLDQRISGRERSSFGFAHRIHLYSDYSILVC  125 (351)
Q Consensus        49 ~Y~i~~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~~~---e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~  125 (351)
                      +|++.+.||.|+||.||+|. +..+++.||+|++.+....   ....+....+......|+++......+..++..++|+
T Consensus         1 ~y~~~~~i~~g~~~~v~~~~-~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~   79 (258)
T cd05578           1 HFELLRVIGKGAFGKVCIVQ-KRDTKKMFAMKYMNKQKCVEKGSVRNVLNERRILQELNHPFLVNLWYSFQDEENMYLVV   79 (258)
T ss_pred             CceEEEEeccCCCceEEEEE-EccCCcEEEEEEEehhhhcchhHHHHHHHHHHHHHhCCCCChHHHHHhhcCCCeEEEEE
Confidence            48999999999999999999 5677899999998754321   1222222223444567788888777777888999999


Q ss_pred             EecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeeccCCCCCcccCC
Q 018699          126 DYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSGPWQDQG  205 (351)
Q Consensus       126 e~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~~~~~~~~~~  205 (351)
                      ||+.+++|.+.+..    ..++++..+..++.|++.|+.|||++|++|+||+|+||+++                 .++.
T Consensus        80 e~~~~~~L~~~l~~----~~~l~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~-----------------~~~~  138 (258)
T cd05578          80 DLLLGGDLRYHLSQ----KVKFSEEQVKFWICEIVLALEYLHSKGIIHRDIKPDNILLD-----------------EQGH  138 (258)
T ss_pred             eCCCCCCHHHHHHh----cCCcCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHeEEc-----------------CCCC
Confidence            99999999999987    35889999999999999999999999999999999999999                 6778


Q ss_pred             eEEeecCCccccccCCCCccccccccCCCcccceeccCCCCCccchHhHHHHHHHHHHhCccccccccCCCCC---ceee
Q 018699          206 LCLVDWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQEKKPWKFQVDTYGLCAIVHMMLHNSYMEIEKKASPDG---GLVY  282 (351)
Q Consensus       206 ~~l~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~p~~~~~~~~~~---~~~~  282 (351)
                      ++|+|||.+.....   ........++..|+|||.+.+..++.++|+||||+++|+|++|..||.........   ....
T Consensus       139 ~~l~d~~~~~~~~~---~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~  215 (258)
T cd05578         139 VHITDFNIATKVTP---DTLTTSTSGTPGYMAPEVLCRQGYSVAVDWWSLGVTAYECLRGKRPYRGHSRTIRDQIRAKQE  215 (258)
T ss_pred             EEEeecccccccCC---CccccccCCChhhcCHHHHcccCCCCcccchhhHHHHHHHHhCCCCCCCCCccHHHHHHHHhc
Confidence            99999998864321   11233456788999999998888899999999999999999999998865531000   0011


Q ss_pred             ecCcchhhhhHHHHHHHHHHHHhcCCCCCChHH--HHHHHHHH
Q 018699          283 LPKLSFKRYWKVELWKSLFTNLLNMSSGNDKEV--LQNLQKSF  323 (351)
Q Consensus       283 ~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~--~e~l~~~~  323 (351)
                      ......+..++ ..+.++|.+||..||.+||++  .|++.|+|
T Consensus       216 ~~~~~~~~~~~-~~~~~~i~~~l~~~p~~R~~~~~~~l~~~~~  257 (258)
T cd05578         216 TADVLYPATWS-TEAIDAINKLLERDPQKRLGDNLKDLKNHPY  257 (258)
T ss_pred             cccccCcccCc-HHHHHHHHHHccCChhHcCCccHHHHhcCCC
Confidence            13334444455 889999999999999999999  99888875

Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A.

>KOG0696 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=3.3e-39  Score=281.61  Aligned_cols=257  Identities=18%  Similarity=0.227  Sum_probs=213.4

Q ss_pred             EEcCeeEEEEEEeeccCceEEEEEEecCCCCceEEEEecCCCCCh---HHHHHHHHHhhhc-cccccccccceeeecccC
Q 018699           44 EIGGKKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFPW---EFYMYRQLDQRIS-GRERSSFGFAHRIHLYSD  119 (351)
Q Consensus        44 ~i~~~~Y~i~~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~~~---e~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~  119 (351)
                      .|.-.+|.++.+||+|+||.|.+|. +..+.+.+|||+++++...   ..+.-....+.+. ....+.++.++..++.-+
T Consensus       345 ~i~~tDFnFl~VlGKGSFGKVlLae-rkgtdELyAiKiLkKDViiQdDDvectm~EKrvLAL~~kppFL~qlHScFQTmD  423 (683)
T KOG0696|consen  345 RIKATDFNFLMVLGKGSFGKVLLAE-RKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLVQLHSCFQTMD  423 (683)
T ss_pred             ceeecccceEEEeccCccceeeeec-ccCcchhhhhhhhccceeeecCcccceehhhhheecCCCCchHHHHHHHhhhhh
Confidence            4445689999999999999999999 6788899999999876332   1111111111111 234567778888888899


Q ss_pred             eeEEEEEecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeeccCCCC
Q 018699          120 YSILVCDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSG  199 (351)
Q Consensus       120 ~~~lv~e~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~~~~  199 (351)
                      .+|+||||+.||+|...++..    +.+.+..+..++.+|+-||-+||++||++||||.+||+++               
T Consensus       424 RLyFVMEyvnGGDLMyhiQQ~----GkFKEp~AvFYAaEiaigLFFLh~kgIiYRDLKLDNvmLd---------------  484 (683)
T KOG0696|consen  424 RLYFVMEYVNGGDLMYHIQQV----GKFKEPVAVFYAAEIAIGLFFLHSKGIIYRDLKLDNVMLD---------------  484 (683)
T ss_pred             heeeEEEEecCchhhhHHHHh----cccCCchhhhhhHHHHHHhhhhhcCCeeeeeccccceEec---------------
Confidence            999999999999999999985    6788999999999999999999999999999999999999               


Q ss_pred             CcccCCeEEeecCCccccccCCCCccccccccCCCcccceeccCCCCCccchHhHHHHHHHHHHhCccccccccCCCCCc
Q 018699          200 PWQDQGLCLVDWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQEKKPWKFQVDTYGLCAIVHMMLHNSYMEIEKKASPDGG  279 (351)
Q Consensus       200 ~~~~~~~~l~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~p~~~~~~~~~~~  279 (351)
                        ++|.+||+|||++...  ..++....+.+|||.|+|||++...+|+.++|+||+||++|||+.|++||..+.+....+
T Consensus       485 --~eGHiKi~DFGmcKEn--i~~~~TTkTFCGTPdYiAPEIi~YqPYgksvDWWa~GVLLyEmlaGQpPFdGeDE~elF~  560 (683)
T KOG0696|consen  485 --SEGHIKIADFGMCKEN--IFDGVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDGEDEDELFQ  560 (683)
T ss_pred             --cCCceEeeeccccccc--ccCCcceeeecCCCcccccceEEecccccchhHHHHHHHHHHHHcCCCCCCCCCHHHHHH
Confidence              8899999999998752  234556788999999999999999999999999999999999999999999888775555


Q ss_pred             eeeecCcchhhhhHHHHHHHHHHHHhcCCCCCChH----HHHHH-HHHHHH
Q 018699          280 LVYLPKLSFKRYWKVELWKSLFTNLLNMSSGNDKE----VLQNL-QKSFQD  325 (351)
Q Consensus       280 ~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~s----~~e~l-~~~~~~  325 (351)
                      .+......+|...+ .++.++++..|.+.|.+|..    .++-+ .|||..
T Consensus       561 aI~ehnvsyPKslS-kEAv~ickg~ltK~P~kRLGcg~~ge~di~~H~FFR  610 (683)
T KOG0696|consen  561 AIMEHNVSYPKSLS-KEAVAICKGLLTKHPGKRLGCGPEGERDIREHPFFR  610 (683)
T ss_pred             HHHHccCcCccccc-HHHHHHHHHHhhcCCccccCCCCccccchhhCcchh
Confidence            56677888888888 88999999999999999953    34444 588744

>PHA02988 hypothetical protein; Provisional

Probab=100.00  E-value=3.7e-38  Score=280.71  Aligned_cols=244  Identities=10%  Similarity=0.020  Sum_probs=186.4

Q ss_pred             eeEEEE--EEeeccCceEEEEEEecCCCCceEEEEecCCCCChHHH---HHHHHHhhhccccccccccceeeecc----c
Q 018699           48 KKYQIK--GCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFPWEFY---MYRQLDQRISGRERSSFGFAHRIHLY----S  118 (351)
Q Consensus        48 ~~Y~i~--~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~~~e~~---~~~~~~~~~~~~~~~~~~~~~~~~~~----~  118 (351)
                      ++++..  ..||.|+++.||+|.+   +|+.||||.+.........   .+......+....|++++....+...    .
T Consensus        18 ~~i~~~~~~~i~~g~~~~v~~~~~---~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~~~g~~~~~~~~~   94 (283)
T PHA02988         18 DDIDKYTSVLIKENDQNSIYKGIF---NNKEVIIRTFKKFHKGHKVLIDITENEIKNLRRIDSNNILKIYGFIIDIVDDL   94 (283)
T ss_pred             HHcCCCCCeEEeeCCceEEEEEEE---CCEEEEEEeccccccccHHHHHHHHHHHHHHHhcCCCCEEEEeeeEEecccCC
Confidence            344444  6789999999999995   4789999998865443322   22222234445567788877776544    4


Q ss_pred             CeeEEEEEecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHC-CceecCCCCCcEEEeecCCcceeeccCC
Q 018699          119 DYSILVCDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDV-GIIHGDFKPDNLLIRYARDELTVLDHDR  197 (351)
Q Consensus       119 ~~~~lv~e~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~-~i~H~dl~p~Nill~~~~~~~~~~~~~~  197 (351)
                      ...++||||+++|+|.+++..    ...+++.....++.|++.|+.+||+. +++||||+|+||+++             
T Consensus        95 ~~~~lv~Ey~~~g~L~~~l~~----~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~Hrdlkp~nill~-------------  157 (283)
T PHA02988         95 PRLSLILEYCTRGYLREVLDK----EKDLSFKTKLDMAIDCCKGLYNLYKYTNKPYKNLTSVSFLVT-------------  157 (283)
T ss_pred             CceEEEEEeCCCCcHHHHHhh----CCCCChhHHHHHHHHHHHHHHHHHhcCCCCCCcCChhhEEEC-------------
Confidence            578999999999999999987    46788999999999999999999985 999999999999999             


Q ss_pred             CCCcccCCeEEeecCCccccccCCCCccccccccCCCcccceeccC--CCCCccchHhHHHHHHHHHHhCccccccccCC
Q 018699          198 SGPWQDQGLCLVDWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQEK--KPWKFQVDTYGLCAIVHMMLHNSYMEIEKKAS  275 (351)
Q Consensus       198 ~~~~~~~~~~l~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~--~~~~~~~DiwslG~il~~l~~g~~p~~~~~~~  275 (351)
                          .++.++|+|||++.....     ......++..|+|||++.+  ..++.++|||||||++|+|++|..||...+..
T Consensus       158 ----~~~~~kl~dfg~~~~~~~-----~~~~~~~~~~y~aPE~~~~~~~~~~~k~Di~SlGvil~el~~g~~Pf~~~~~~  228 (283)
T PHA02988        158 ----ENYKLKIICHGLEKILSS-----PPFKNVNFMVYFSYKMLNDIFSEYTIKDDIYSLGVVLWEIFTGKIPFENLTTK  228 (283)
T ss_pred             ----CCCcEEEcccchHhhhcc-----ccccccCcccccCHHHhhhccccccchhhhhHHHHHHHHHHHCCCCCCCCCHH
Confidence                778899999998864321     1123457889999999976  67899999999999999999999999765432


Q ss_pred             CCCcee--eecCcchhhhhHHHHHHHHHHHHhcCCCCCChHHHHHHHH
Q 018699          276 PDGGLV--YLPKLSFKRYWKVELWKSLFTNLLNMSSGNDKEVLQNLQK  321 (351)
Q Consensus       276 ~~~~~~--~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~~  321 (351)
                      ......  .......+...+ +.+.+||.+||+.||++||++.+++..
T Consensus       229 ~~~~~i~~~~~~~~~~~~~~-~~l~~li~~cl~~dp~~Rps~~ell~~  275 (283)
T PHA02988        229 EIYDLIINKNNSLKLPLDCP-LEIKCIVEACTSHDSIKRPNIKEILYN  275 (283)
T ss_pred             HHHHHHHhcCCCCCCCCcCc-HHHHHHHHHHhcCCcccCcCHHHHHHH
Confidence            110000  112223332334 789999999999999999999999863

>cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4

Probab=100.00  E-value=3.8e-38  Score=277.93  Aligned_cols=251  Identities=13%  Similarity=0.136  Sum_probs=192.9

Q ss_pred             eEEEEEEeeccCceEEEEEEecCCCCceEEEEecCCCCCh---H---HHHHHHHHhhhccccccccccceeeecccCeeE
Q 018699           49 KYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFPW---E---FYMYRQLDQRISGRERSSFGFAHRIHLYSDYSI  122 (351)
Q Consensus        49 ~Y~i~~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~~~---e---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  122 (351)
                      +|++.+.||.|+||.||+|.+  .+++.+|+|.+......   .   ...+......+....++++..........+..+
T Consensus         1 ~~~~~~~ig~g~~~~v~~~~~--~~~~~~avk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~   78 (265)
T cd06631           1 EWTKGEVLGKGAYGTVYCGLT--NQGQLIAVKQVELDTSNVLAAEKEYEKLQEEVDLLKSLKHVNIVQYLGTCLDDNTIS   78 (265)
T ss_pred             CccccceEeccCCeEEEEEEE--cCCCeEEEEEeecCccchhhHHHHHHHHHHHHHHHHhcCCCCEeeEeeEeecCCeEE
Confidence            488899999999999999984  46789999987644221   1   111222223344456777888888877788999


Q ss_pred             EEEEecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeeccCCCCCcc
Q 018699          123 LVCDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSGPWQ  202 (351)
Q Consensus       123 lv~e~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~~~~~~~  202 (351)
                      +++||+++++|.+++.+    ...+++..+..++.|++.|++|||+.|++|+||+|+||+++                 +
T Consensus        79 lv~e~~~~~~L~~~l~~----~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nil~~-----------------~  137 (265)
T cd06631          79 IFMEFVPGGSISSILNR----FGPLPEPVFCKYTKQILDGVAYLHNNCVVHRDIKGNNVMLM-----------------P  137 (265)
T ss_pred             EEEecCCCCcHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCcCHHhEEEC-----------------C
Confidence            99999999999999976    35789999999999999999999999999999999999998                 6


Q ss_pred             cCCeEEeecCCccccccCC----CCccccccccCCCcccceeccCCCCCccchHhHHHHHHHHHHhCccccccccCCCCC
Q 018699          203 DQGLCLVDWGRGIDLHLFP----DNMEFEGDCRTSGFRCIEMQEKKPWKFQVDTYGLCAIVHMMLHNSYMEIEKKASPDG  278 (351)
Q Consensus       203 ~~~~~l~Dfg~a~~~~~~~----~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~p~~~~~~~~~~  278 (351)
                      ++.++|+|||.+.......    .........++..|+|||.+.+..++.++|+||||+++|+|++|..||.........
T Consensus       138 ~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~~~  217 (265)
T cd06631         138 NGIIKLIDFGCARRLAWVGLHGTHSNMLKSMHGTPYWMAPEVINESGYGRKSDIWSIGCTVFEMATGKPPLASMDRLAAM  217 (265)
T ss_pred             CCeEEeccchhhHhhhhccccccccccccccCCCccccChhhhcCCCCcchhhHHHHHHHHHHHHhCCCccccCChHHHH
Confidence            7789999999886432111    111123345788999999998888899999999999999999999999653322110


Q ss_pred             ce---eeecCcchhhhhHHHHHHHHHHHHhcCCCCCChHHHHHHHHHH
Q 018699          279 GL---VYLPKLSFKRYWKVELWKSLFTNLLNMSSGNDKEVLQNLQKSF  323 (351)
Q Consensus       279 ~~---~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~~~~  323 (351)
                      ..   ........+..++ ..+.++|.+||.++|++||++.+++.|+|
T Consensus       218 ~~~~~~~~~~~~~~~~~~-~~~~~~i~~~l~~~p~~Rp~~~~~l~~~~  264 (265)
T cd06631         218 FYIGAHRGLMPRLPDSFS-AAAIDFVTSCLTRDQHERPSALQLLRHDF  264 (265)
T ss_pred             HHhhhccCCCCCCCCCCC-HHHHHHHHHHhcCCcccCCCHHHHhcCCC
Confidence            00   0011122333344 78999999999999999999999999986

Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals.

>cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3

Probab=100.00  E-value=1.1e-37  Score=276.90  Aligned_cols=267  Identities=18%  Similarity=0.157  Sum_probs=204.2

Q ss_pred             eEEEEEEeeccCceEEEEEEecCCCCceEEEEecCCCCC-hHHHHHHHHHhhhccccccccccceeeecccCeeEEEEEe
Q 018699           49 KYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFP-WEFYMYRQLDQRISGRERSSFGFAHRIHLYSDYSILVCDY  127 (351)
Q Consensus        49 ~Y~i~~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~~-~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~  127 (351)
                      -|++.+.||.|+||.||+|. +..+++.||+|++..... .....+...........|++++.....+..++..++||||
T Consensus         5 ~~~~~~~ig~G~~~~vy~~~-~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~   83 (277)
T cd06641           5 LFTKLEKIGKGSFGEVFKGI-DNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEY   83 (277)
T ss_pred             hhhhheeEeecCCeEEEEEE-ECCCCcEEEEEEeccccchHHHHHHHHHHHHHHhcCCCCEeEEEEEEEeCCeEEEEEEe
Confidence            47889999999999999999 566789999998764432 1222222222334455677888888878888899999999


Q ss_pred             cCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeeccCCCCCcccCCeE
Q 018699          128 LSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSGPWQDQGLC  207 (351)
Q Consensus       128 ~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~~~~~~~~~~~~  207 (351)
                      +++++|.+++..     ..+++..+..++.|++.++.+||+.|++|+||+|+||+++                 .++.++
T Consensus        84 ~~~~~l~~~i~~-----~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~dl~p~Ni~i~-----------------~~~~~~  141 (277)
T cd06641          84 LGGGSALDLLEP-----GPLDETQIATILREILKGLDYLHSEKKIHRDIKAANVLLS-----------------EHGEVK  141 (277)
T ss_pred             CCCCcHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHccCCeecCCCCHHhEEEC-----------------CCCCEE
Confidence            999999998864     4688999999999999999999999999999999999998                 677799


Q ss_pred             EeecCCccccccCCCCccccccccCCCcccceeccCCCCCccchHhHHHHHHHHHHhCccccccccCCCCCcee-eecCc
Q 018699          208 LVDWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQEKKPWKFQVDTYGLCAIVHMMLHNSYMEIEKKASPDGGLV-YLPKL  286 (351)
Q Consensus       208 l~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~p~~~~~~~~~~~~~-~~~~~  286 (351)
                      |+|||++.....  .........++..|+|||.+.+..++.++|+||+||++|+|++|..||............ .....
T Consensus       142 l~dfg~~~~~~~--~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~  219 (277)
T cd06641         142 LADFGVAGQLTD--TQIKRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELAKGEPPHSELHPMKVLFLIPKNNPP  219 (277)
T ss_pred             Eeecccceeccc--chhhhccccCCccccChhhhccCCCCchhhHHHHHHHHHHHHcCCCCCCccchHHHHHHHhcCCCC
Confidence            999998754321  111223346788899999998888889999999999999999999998653322100000 01111


Q ss_pred             chhhhhHHHHHHHHHHHHhcCCCCCChHHHHHHHHHHHHHHhhChHHHHHHHHHH
Q 018699          287 SFKRYWKVELWKSLFTNLLNMSSGNDKEVLQNLQKSFQDYLCSNPQLLKNLKELL  341 (351)
Q Consensus       287 ~~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~~~~~~~~~~~~~~~~~~~~~~  341 (351)
                      ..+...+ ..+.++|.+||..+|.+||++.++++|+|......++....++.+..
T Consensus       220 ~~~~~~~-~~~~~~i~~~l~~~p~~Rp~~~~~l~~~~~~~~~~~~~~~~~~~~~~  273 (277)
T cd06641         220 TLEGNYS-KPLKEFVEACLNKEPSFRPTAKELLKHKFIVRFAKKTSYLTELIDRY  273 (277)
T ss_pred             CCCcccC-HHHHHHHHHHccCChhhCcCHHHHHhCHHHhhhhhccchHHHHHHHh
Confidence            1222223 67899999999999999999999999998777777766666655544

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int

>cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase

Probab=100.00  E-value=5.9e-38  Score=278.81  Aligned_cols=245  Identities=17%  Similarity=0.222  Sum_probs=186.9

Q ss_pred             EeeccCceEEEEEEecCCCCceEEEEecCCCCCh----HHHH--HHHHHhhhccccccccccceeeecccCeeEEEEEec
Q 018699           55 CAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFPW----EFYM--YRQLDQRISGRERSSFGFAHRIHLYSDYSILVCDYL  128 (351)
Q Consensus        55 ~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~~~----e~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~  128 (351)
                      .||+|+||.||+|. +..+++.||+|.+.+....    +...  ...+........++++......+...+..++||||+
T Consensus         1 ~ig~g~~g~Vy~~~-~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e~~   79 (278)
T cd05606           1 IIGRGGFGEVYGCR-KADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLM   79 (278)
T ss_pred             CcccCCCeEEEEEE-EecCCCEEEEEEeeccccccchhHHHHHHHHHHHHHHHhCCCCcEeeeeeeeecCCEEEEEEecC
Confidence            48999999999999 5677899999988654221    1111  111112222345566666666667778899999999


Q ss_pred             CCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeeccCCCCCcccCCeEE
Q 018699          129 SQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSGPWQDQGLCL  208 (351)
Q Consensus       129 ~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~~~~~~~~~~~~l  208 (351)
                      .|++|.+++..    ...+++..++.++.|++.|+.|||+.+++|+||+|+||+++                 .++.++|
T Consensus        80 ~g~~L~~~l~~----~~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~di~p~nili~-----------------~~~~~kl  138 (278)
T cd05606          80 NGGDLHYHLSQ----HGVFSEAEMRFYAAEIILGLEHMHNRFVVYRDLKPANILLD-----------------EHGHVRI  138 (278)
T ss_pred             CCCcHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHCCEEcCCCCHHHEEEC-----------------CCCCEEE
Confidence            99999998876    46799999999999999999999999999999999999998                 6778999


Q ss_pred             eecCCccccccCCCCccccccccCCCcccceeccC-CCCCccchHhHHHHHHHHHHhCccccccccCCCC---Cceeeec
Q 018699          209 VDWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQEK-KPWKFQVDTYGLCAIVHMMLHNSYMEIEKKASPD---GGLVYLP  284 (351)
Q Consensus       209 ~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~~DiwslG~il~~l~~g~~p~~~~~~~~~---~~~~~~~  284 (351)
                      +|||.+.....    .......|+..|+|||.+.+ ..++.++||||+|+++|+|++|..||........   .......
T Consensus       139 ~dfg~~~~~~~----~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~s~G~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~  214 (278)
T cd05606         139 SDLGLACDFSK----KKPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTM  214 (278)
T ss_pred             ccCcCccccCc----cCCcCcCCCcCCcCcHHhcCCCCCCcccchHhHHHHHHHHHhCCCCCCCCCccchHHHHHHhhcc
Confidence            99998864321    11233468999999999864 4678999999999999999999999976532211   1111122


Q ss_pred             CcchhhhhHHHHHHHHHHHHhcCCCCCCh-----HHHHHHHHHHHHH
Q 018699          285 KLSFKRYWKVELWKSLFTNLLNMSSGNDK-----EVLQNLQKSFQDY  326 (351)
Q Consensus       285 ~~~~~~~~~~~~~~~li~~~L~~dP~~R~-----s~~e~l~~~~~~~  326 (351)
                      ....+..++ ..+.++|.+||..+|.+||     ++.+++.|+|..-
T Consensus       215 ~~~~~~~~s-~~~~~li~~~l~~~p~~R~~~~~~~~~~ll~~~~~~~  260 (278)
T cd05606         215 AVELPDSFS-PELRSLLEGLLQRDVNRRLGCLGRGAQEVKEHPFFRS  260 (278)
T ss_pred             CCCCCCcCC-HHHHHHHHHHhhcCHHhccCCCCCCHHHHHhCccccC
Confidence            233444444 7899999999999999999     9999999986543

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co

>cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases

Probab=100.00  E-value=1.1e-37  Score=276.12  Aligned_cols=252  Identities=18%  Similarity=0.184  Sum_probs=190.7

Q ss_pred             eEEEEEEeeccCceEEEEEEecCCCCceEEEEecCCCCCh-------HHH---HHHHHHhhhccccccccccceeeeccc
Q 018699           49 KYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFPW-------EFY---MYRQLDQRISGRERSSFGFAHRIHLYS  118 (351)
Q Consensus        49 ~Y~i~~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~~~-------e~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~  118 (351)
                      +|.+.+.||.|++|.||+|. +..+++.||+|.+......       ...   .+...........+++++.........
T Consensus         2 ~~~~~~~lg~g~~~~vy~~~-~~~~~~~~a~K~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~   80 (272)
T cd06629           2 KWVKGELIGKGTYGRVYLAL-NVTTGEMMAVKQVELPATIAGRHDSRQKDMVKALRSEIETLKDLDHLNIVQYLGFETTE   80 (272)
T ss_pred             ceeecceecccCceEEEEEe-ecCCCceeeeeeeechhhhhcccchHHHHHHHHHHHHHHHHHhcCCCCcceEEEEeccC
Confidence            58999999999999999999 5677899999987532110       111   111122334455677888888777788


Q ss_pred             CeeEEEEEecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeeccCCC
Q 018699          119 DYSILVCDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRS  198 (351)
Q Consensus       119 ~~~~lv~e~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~~~  198 (351)
                      +..++||||+++++|.+++..    ...+++..+..++.|++.|+.+||+++++|+||+|+||+++              
T Consensus        81 ~~~~lv~e~~~~~~L~~~l~~----~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~~~nil~~--------------  142 (272)
T cd06629          81 EYLSIFLEYVPGGSIGSCLRT----YGRFEEQLVRFFTEQVLEGLAYLHSKGILHRDLKADNLLVD--------------  142 (272)
T ss_pred             CceEEEEecCCCCcHHHHHhh----ccCCCHHHHHHHHHHHHHHHHHHhhCCeeecCCChhhEEEc--------------
Confidence            899999999999999999977    36789999999999999999999999999999999999999              


Q ss_pred             CCcccCCeEEeecCCccccccCCCCccccccccCCCcccceeccCCC--CCccchHhHHHHHHHHHHhCccccccccCCC
Q 018699          199 GPWQDQGLCLVDWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQEKKP--WKFQVDTYGLCAIVHMMLHNSYMEIEKKASP  276 (351)
Q Consensus       199 ~~~~~~~~~l~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~--~~~~~DiwslG~il~~l~~g~~p~~~~~~~~  276 (351)
                         .++.++|+|||.+................++..|+|||.+....  ++.++|+||||+++|++++|..||.......
T Consensus       143 ---~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~  219 (272)
T cd06629         143 ---ADGICKISDFGISKKSDDIYDNDQNMSMQGSVFWMAPEVIHSYSQGYSAKVDIWSLGCVVLEMFAGRRPWSDEEAIA  219 (272)
T ss_pred             ---CCCeEEEeeccccccccccccccccccccCCccccCHHHhccccCCCCccchhHHHHHHHHHHHhCCCCCcCcchHH
Confidence               67789999999886432211111223345788999999987644  7899999999999999999999986433210


Q ss_pred             CCc--eeeecCcchh----hhhHHHHHHHHHHHHhcCCCCCChHHHHHHHHHH
Q 018699          277 DGG--LVYLPKLSFK----RYWKVELWKSLFTNLLNMSSGNDKEVLQNLQKSF  323 (351)
Q Consensus       277 ~~~--~~~~~~~~~~----~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~~~~  323 (351)
                      ...  .........+    ...+ ..++++|.+||++||++||++.++++|||
T Consensus       220 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~li~~~l~~~p~~Rps~~~il~~~~  271 (272)
T cd06629         220 AMFKLGNKRSAPPIPPDVSMNLS-PVALDFLNACFTINPDNRPTARELLQHPF  271 (272)
T ss_pred             HHHHhhccccCCcCCccccccCC-HHHHHHHHHHhcCChhhCCCHHHHhhCCC
Confidence            000  0000111111    1123 78999999999999999999999999986

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte

>cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases

Probab=100.00  E-value=1.2e-37  Score=274.96  Aligned_cols=253  Identities=11%  Similarity=0.074  Sum_probs=190.6

Q ss_pred             CeeEEEEEEeeccCceEEEEEEecCC--CCceEEEEecCCCCChHH--HHHHHHHhhhccccccccccceeeecccCeeE
Q 018699           47 GKKYQIKGCAGQGGFAKVFKAYVNGD--PEDVVALKIQKPAFPWEF--YMYRQLDQRISGRERSSFGFAHRIHLYSDYSI  122 (351)
Q Consensus        47 ~~~Y~i~~~lg~G~~g~V~~a~~~~~--~~~~vaiK~~~~~~~~e~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  122 (351)
                      .++|++.+.||+|+||+||+|.+...  +...||+|.+......+.  ....++ ..+....++++..........+..+
T Consensus         3 ~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~e~-~~l~~l~h~~i~~~~~~~~~~~~~~   81 (266)
T cd05033           3 PSYVTIEKVIGGGEFGEVCRGRLKLPGKKEIDVAIKTLKAGSSDKQRLDFLTEA-SIMGQFDHPNIIRLEGVVTKSRPVM   81 (266)
T ss_pred             hHHceeeeEecCCccceEEEEEEccCCCCcceEEEEEcCCCCChHHHHHHHHHH-HHHHhCCCCCcceEeEEEecCCceE
Confidence            46799999999999999999996332  356899999876543321  122222 2334456778888888777788899


Q ss_pred             EEEEecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeeccCCCCCcc
Q 018699          123 LVCDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSGPWQ  202 (351)
Q Consensus       123 lv~e~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~~~~~~~  202 (351)
                      +||||+++++|.+++...   ...+++..++.++.|++.|+.|||+++|+|+||+|+||+++                 .
T Consensus        82 iv~e~~~~~~L~~~~~~~---~~~~~~~~~~~~~~~l~~~l~~Lh~~~i~H~di~p~nili~-----------------~  141 (266)
T cd05033          82 IITEYMENGSLDKFLREN---DGKFTVGQLVGMLRGIASGMKYLSEMNYVHRDLAARNILVN-----------------S  141 (266)
T ss_pred             EEEEcCCCCCHHHHHHhc---cCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCcceEEEc-----------------C
Confidence            999999999999998764   35789999999999999999999999999999999999999                 6


Q ss_pred             cCCeEEeecCCccccccCCCCccccccccCCCcccceeccCCCCCccchHhHHHHHHHHHHh-CccccccccCCCCCcee
Q 018699          203 DQGLCLVDWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQEKKPWKFQVDTYGLCAIVHMMLH-NSYMEIEKKASPDGGLV  281 (351)
Q Consensus       203 ~~~~~l~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~-g~~p~~~~~~~~~~~~~  281 (351)
                      ++.++|+|||.+................++..|+|||.+.+..++.++||||||+++|+|++ |..||............
T Consensus       142 ~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~Dv~slG~~l~~l~~~g~~p~~~~~~~~~~~~~  221 (266)
T cd05033         142 NLVCKVSDFGLSRRLEDSEATYTTKGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSYGERPYWDMSNQDVIKAV  221 (266)
T ss_pred             CCCEEECccchhhcccccccceeccCCCCCccccChhhhccCCCccccchHHHHHHHHHHHccCCCCCCCCCHHHHHHHH
Confidence            77899999999875431111111112234567999999988888999999999999999997 99888643321000000


Q ss_pred             -eecCcchhhhhHHHHHHHHHHHHhcCCCCCChHHHHHHHH
Q 018699          282 -YLPKLSFKRYWKVELWKSLFTNLLNMSSGNDKEVLQNLQK  321 (351)
Q Consensus       282 -~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~~  321 (351)
                       .....+.+..++ +.+.+++.+||+.+|++||++.+++.+
T Consensus       222 ~~~~~~~~~~~~~-~~l~~li~~cl~~~p~~Rp~~~ei~~~  261 (266)
T cd05033         222 EDGYRLPPPMDCP-SALYQLMLDCWQKDRNERPTFSQIVST  261 (266)
T ss_pred             HcCCCCCCCCCCC-HHHHHHHHHHcCCCcccCcCHHHHHHH
Confidence             000111222334 789999999999999999999999876

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment

>cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4

Probab=100.00  E-value=1.2e-37  Score=277.76  Aligned_cols=251  Identities=17%  Similarity=0.182  Sum_probs=188.5

Q ss_pred             eeEEEEEEeeccCceEEEEEEecCCCCceEEEEecCCCCChH--HHHHHHHHhhhccccccccccceeeecccCeeEEEE
Q 018699           48 KKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFPWE--FYMYRQLDQRISGRERSSFGFAHRIHLYSDYSILVC  125 (351)
Q Consensus        48 ~~Y~i~~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~~~e--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~  125 (351)
                      ++|++.+.||+|++|.||+|. +..+++.||+|++.......  ..........+....++++......+......++||
T Consensus         1 ~~y~~~~~l~~g~~~~v~~~~-~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~v~   79 (286)
T cd07847           1 EKYEKLSKIGEGSYGVVFKCR-NRETGQIVAIKKFVESEDDPVIKKIALREIRMLKQLKHPNLVNLIEVFRRKRKLHLVF   79 (286)
T ss_pred             CceeeeeeecccCCeEEEEEE-ECCCCcEEEEEEEeecccCccccHHHHHHHHHHHhCCCCCEeeeeeEEeeCCEEEEEE
Confidence            479999999999999999999 56778999999876432111  111111222333445677888888787788999999


Q ss_pred             EecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeeccCCCCCcccCC
Q 018699          126 DYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSGPWQDQG  205 (351)
Q Consensus       126 e~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~~~~~~~~~~  205 (351)
                      ||+++++|..++..    ...+++..++.++.|++.|+.|||++|++|+||+|+||+++                 .++.
T Consensus        80 e~~~~~~l~~~~~~----~~~~~~~~~~~~~~ql~~~l~~LH~~~i~H~dl~p~nil~~-----------------~~~~  138 (286)
T cd07847          80 EYCDHTVLNELEKN----PRGVPEHLIKKIIWQTLQAVNFCHKHNCIHRDVKPENILIT-----------------KQGQ  138 (286)
T ss_pred             eccCccHHHHHHhC----CCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCChhhEEEc-----------------CCCc
Confidence            99988888777654    45789999999999999999999999999999999999998                 6778


Q ss_pred             eEEeecCCccccccCCCCccccccccCCCcccceeccC-CCCCccchHhHHHHHHHHHHhCccccccccCCCC-------
Q 018699          206 LCLVDWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQEK-KPWKFQVDTYGLCAIVHMMLHNSYMEIEKKASPD-------  277 (351)
Q Consensus       206 ~~l~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~~DiwslG~il~~l~~g~~p~~~~~~~~~-------  277 (351)
                      ++|+|||++......  ........++..|+|||.+.+ ..++.++||||+|+++|+|++|..||........       
T Consensus       139 ~~l~dfg~~~~~~~~--~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~i~~~l~~g~~p~~~~~~~~~~~~~~~~  216 (286)
T cd07847         139 IKLCDFGFARILTGP--GDDYTDYVATRWYRAPELLVGDTQYGPPVDVWAIGCVFAELLTGQPLWPGKSDVDQLYLIRKT  216 (286)
T ss_pred             EEECccccceecCCC--cccccCcccccccCCHHHHhCCCCcCchhhhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHH
Confidence            999999988654321  112233457888999999866 5578999999999999999999999864332100       


Q ss_pred             --------------Ccee---eecC----cchh---hhhHHHHHHHHHHHHhcCCCCCChHHHHHHHHHH
Q 018699          278 --------------GGLV---YLPK----LSFK---RYWKVELWKSLFTNLLNMSSGNDKEVLQNLQKSF  323 (351)
Q Consensus       278 --------------~~~~---~~~~----~~~~---~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~~~~  323 (351)
                                    ..+.   ..+.    .+..   ...+ ..+.+||.+||++||++||++.|++.|+|
T Consensus       217 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~li~~~l~~~p~~Rp~~~eil~~~~  285 (286)
T cd07847         217 LGDLIPRHQQIFSTNQFFKGLSIPEPETREPLESKFPNIS-SPALSFLKGCLQMDPTERLSCEELLEHPY  285 (286)
T ss_pred             hCCCChHHhhhcccccccccccCCCcccccCHHHHhccCC-HHHHHHHHHHhcCCccccCCHHHHhcCCC
Confidence                          0000   0000    0000   0122 67889999999999999999999999986

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio

>cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases

Probab=100.00  E-value=1e-37  Score=274.68  Aligned_cols=254  Identities=12%  Similarity=0.069  Sum_probs=191.7

Q ss_pred             EEcCeeEEEEEEeeccCceEEEEEEecCCCCceEEEEecCCCCChHHHHHHHHHhhhccccccccccceeeecccCeeEE
Q 018699           44 EIGGKKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFPWEFYMYRQLDQRISGRERSSFGFAHRIHLYSDYSIL  123 (351)
Q Consensus        44 ~i~~~~Y~i~~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  123 (351)
                      ++..++|++.+.||+|++|.||+|.+ . .++.||+|.+............++ ..+....|+++..........+..++
T Consensus         2 ~~~~~~~~~~~~lg~g~~~~v~~~~~-~-~~~~v~iK~~~~~~~~~~~~~~e~-~~l~~l~h~~i~~~~~~~~~~~~~~l   78 (261)
T cd05068           2 EIDRTSIQLLRKLGAGQFGEVWEGLW-N-NTTPVAVKTLKPGTMDPKDFLAEA-QIMKKLRHPKLIQLYAVCTLEEPIYI   78 (261)
T ss_pred             ccchhheeeEEEecccCCccEEEEEe-c-CCeEEEEEeeCCCcccHHHHHHHH-HHHHHCCCCCccceeEEEecCCCeee
Confidence            45678899999999999999999984 3 357899999876544333333322 23334557788888888888888999


Q ss_pred             EEEecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeeccCCCCCccc
Q 018699          124 VCDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSGPWQD  203 (351)
Q Consensus       124 v~e~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~~~~~~~~  203 (351)
                      ||||+++++|.+++....  +..+++..+..++.|++.|+.+||+.|++|+||+|+||+++                 .+
T Consensus        79 v~e~~~~~~L~~~~~~~~--~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~Nil~~-----------------~~  139 (261)
T cd05068          79 VTELMKYGSLLEYLQGGA--GRALKLPQLIDMAAQVASGMAYLEAQNYIHRDLAARNVLVG-----------------EN  139 (261)
T ss_pred             eeecccCCcHHHHHhccC--CCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCcceEEEc-----------------CC
Confidence            999999999999997642  34689999999999999999999999999999999999999                 67


Q ss_pred             CCeEEeecCCccccccCCCCccccccccCCCcccceeccCCCCCccchHhHHHHHHHHHHh-CccccccccCCCCCce-e
Q 018699          204 QGLCLVDWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQEKKPWKFQVDTYGLCAIVHMMLH-NSYMEIEKKASPDGGL-V  281 (351)
Q Consensus       204 ~~~~l~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~-g~~p~~~~~~~~~~~~-~  281 (351)
                      +.++|+|||++...... ..........+..|+|||...+..++.++||||||+++|+|++ |+.||........... .
T Consensus       140 ~~~~l~dfg~~~~~~~~-~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~~~  218 (261)
T cd05068         140 NICKVADFGLARVIKED-IYEAREGAKFPIKWTAPEAALYNRFSIKSDVWSFGILLTEIVTYGRMPYPGMTNAEVLQQVD  218 (261)
T ss_pred             CCEEECCcceEEEccCC-cccccCCCcCceeccCccccccCCCCchhhHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHH
Confidence            78999999988654311 0111111222457999999988888999999999999999999 9989865432210000 0


Q ss_pred             eecCcchhhhhHHHHHHHHHHHHhcCCCCCChHHHHHHHH
Q 018699          282 YLPKLSFKRYWKVELWKSLFTNLLNMSSGNDKEVLQNLQK  321 (351)
Q Consensus       282 ~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~~  321 (351)
                      .....+.+...+ ..+.+++.+||+.+|++||++.+++..
T Consensus       219 ~~~~~~~~~~~~-~~~~~li~~~l~~~P~~Rp~~~~l~~~  257 (261)
T cd05068         219 QGYRMPCPPGCP-KELYDIMLDCWKEDPDDRPTFETLQWK  257 (261)
T ss_pred             cCCCCCCCCcCC-HHHHHHHHHHhhcCcccCCCHHHHHHH
Confidence            001112222333 789999999999999999999998753

Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a

>cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase

Probab=100.00  E-value=1.9e-37  Score=274.04  Aligned_cols=252  Identities=17%  Similarity=0.118  Sum_probs=191.7

Q ss_pred             eEEEEEEeeccCceEEEEEEecCCCCceEEEEecCCCCChHHHHHHHHHhhhccccccccccceeeecccCeeEEEEEec
Q 018699           49 KYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFPWEFYMYRQLDQRISGRERSSFGFAHRIHLYSDYSILVCDYL  128 (351)
Q Consensus        49 ~Y~i~~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~  128 (351)
                      .......||+|+||+||+|. +..++..|++|.+..........+...........++++.........++..++|+||+
T Consensus         9 ~~~~~~~lg~g~~g~v~~~~-~~~~~~~v~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~   87 (268)
T cd06624           9 ENGERVVLGKGTYGIVYAAR-DLSTQVRIAIKEIPERDSRYVQPLHEEIALHSYLKHRNIVQYLGSDSENGFFKIFMEQV   87 (268)
T ss_pred             cCCceEEEecCCceEEEEeE-ecCCCcEEEEEEecCCCHHHHHHHHHHHHHHHhcCCCCeeeeeeeeccCCEEEEEEecC
Confidence            33445689999999999999 46678899999887665443333333333445566788888888888888999999999


Q ss_pred             CCCCHHHHHHHHHhhCCCh--hHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeeccCCCCCcccCCe
Q 018699          129 SQGTLQDAINSYVVIGKSM--EEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSGPWQDQGL  206 (351)
Q Consensus       129 ~~~sL~~~l~~~~~~~~~l--~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~~~~~~~~~~~  206 (351)
                      ++++|.+++...   ...+  ++..+..++.|++.|++|||++||+|+||+|+||+++.                ..+.+
T Consensus        88 ~~~~L~~~l~~~---~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~h~dl~p~nil~~~----------------~~~~~  148 (268)
T cd06624          88 PGGSLSALLRSK---WGPLKDNEQTIIFYTKQILEGLKYLHDNQIVHRDIKGDNVLVNT----------------YSGVV  148 (268)
T ss_pred             CCCCHHHHHHHh---cccCCCcHHHHHHHHHHHHHHHHHHHHCCEeecCCCHHHEEEcC----------------CCCeE
Confidence            999999998764   2345  78888999999999999999999999999999999973                24569


Q ss_pred             EEeecCCccccccCCCCccccccccCCCcccceeccCC--CCCccchHhHHHHHHHHHHhCccccccccCCCCCce---e
Q 018699          207 CLVDWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQEKK--PWKFQVDTYGLCAIVHMMLHNSYMEIEKKASPDGGL---V  281 (351)
Q Consensus       207 ~l~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~--~~~~~~DiwslG~il~~l~~g~~p~~~~~~~~~~~~---~  281 (351)
                      +|+|||.+.....  .........+++.|+|||.+.+.  .++.++|+||+|+++|+|++|..||...........   .
T Consensus       149 ~l~dfg~~~~~~~--~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~~Dv~slGvvl~~l~~g~~p~~~~~~~~~~~~~~~~  226 (268)
T cd06624         149 KISDFGTSKRLAG--INPCTETFTGTLQYMAPEVIDKGPRGYGAPADIWSLGCTIVEMATGKPPFIELGEPQAAMFKVGM  226 (268)
T ss_pred             EEecchhheeccc--CCCccccCCCCccccChhhhccccccCCchhhhHHHHHHHHHHHhCCCCCccccChhhhHhhhhh
Confidence            9999998854321  11222334578899999998654  367899999999999999999999865332111110   1


Q ss_pred             eecCcchhhhhHHHHHHHHHHHHhcCCCCCChHHHHHHHHHH
Q 018699          282 YLPKLSFKRYWKVELWKSLFTNLLNMSSGNDKEVLQNLQKSF  323 (351)
Q Consensus       282 ~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~~~~  323 (351)
                      ......++.... +.+.+|+.+||+++|++||++.+++.|||
T Consensus       227 ~~~~~~~~~~~~-~~~~~li~~~l~~~p~~Rpt~~~ll~~~~  267 (268)
T cd06624         227 FKIHPEIPESLS-AEAKNFILRCFEPDPDKRASAHDLLQDPF  267 (268)
T ss_pred             hccCCCCCcccC-HHHHHHHHHHcCCCchhCCCHHHHHhCCC
Confidence            112223344444 78999999999999999999999999987

Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina

>cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1

Probab=100.00  E-value=6.2e-38  Score=275.11  Aligned_cols=252  Identities=18%  Similarity=0.154  Sum_probs=194.0

Q ss_pred             eEEEEEEeeccCceEEEEEEecCCCCceEEEEecCCCCC--hHHHHHHHHHhhhccccccccccceeeecccCeeEEEEE
Q 018699           49 KYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFP--WEFYMYRQLDQRISGRERSSFGFAHRIHLYSDYSILVCD  126 (351)
Q Consensus        49 ~Y~i~~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~~--~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e  126 (351)
                      +|++.+.||+|+||.+|.+. +..+++.||+|.+.....  .+..........+....++++..........+..++|+|
T Consensus         1 ~y~~~~~lg~g~~g~~~~~~-~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e   79 (256)
T cd08218           1 KYVKVKKIGEGSFGKAILVK-SKEDGKQYVIKEINISKMSPKEREESRKEVAVLSNMKHPNIVQYQESFEENGNLYIVMD   79 (256)
T ss_pred             CceEEEEeccCCceEEEEEE-EcCCCCEEEEEEEEhHhCChHHHHHHHHHHHHHHhCCCCCeeeeEeeecCCCeEEEEEe
Confidence            59999999999999999999 567789999998764321  111122222233445567788888888888889999999


Q ss_pred             ecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeeccCCCCCcccCCe
Q 018699          127 YLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSGPWQDQGL  206 (351)
Q Consensus       127 ~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~~~~~~~~~~~  206 (351)
                      |+++++|.+.+....  +..+++..+..++.|++.|+.+||++|++|+||+|+||+++                 .++.+
T Consensus        80 ~~~~~~l~~~~~~~~--~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~~l~~~nil~~-----------------~~~~~  140 (256)
T cd08218          80 YCEGGDLYKKINAQR--GVLFPEDQILDWFVQICLALKHVHDRKILHRDIKSQNIFLT-----------------KDGTI  140 (256)
T ss_pred             cCCCCcHHHHHHhcc--CCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEc-----------------CCCCE
Confidence            999999999887632  34678999999999999999999999999999999999998                 67779


Q ss_pred             EEeecCCccccccCCCCccccccccCCCcccceeccCCCCCccchHhHHHHHHHHHHhCccccccccCCCC-CceeeecC
Q 018699          207 CLVDWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQEKKPWKFQVDTYGLCAIVHMMLHNSYMEIEKKASPD-GGLVYLPK  285 (351)
Q Consensus       207 ~l~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~p~~~~~~~~~-~~~~~~~~  285 (351)
                      +|+|||.+.....  .........+++.|+|||.+.+..++.++|+||+||++|+|++|..||........ ........
T Consensus       141 ~l~d~~~~~~~~~--~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~~  218 (256)
T cd08218         141 KLGDFGIARVLNS--TVELARTCIGTPYYLSPEICENRPYNNKSDIWALGCVLYEMCTLKHAFEAGNMKNLVLKIIRGSY  218 (256)
T ss_pred             EEeeccceeecCc--chhhhhhccCCccccCHHHhCCCCCCCccchhHHHHHHHHHHcCCCCccCCCHHHHHHHHhcCCC
Confidence            9999998864321  11112234578889999999888889999999999999999999999865432100 00011111


Q ss_pred             cchhhhhHHHHHHHHHHHHhcCCCCCChHHHHHHHHHH
Q 018699          286 LSFKRYWKVELWKSLFTNLLNMSSGNDKEVLQNLQKSF  323 (351)
Q Consensus       286 ~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~~~~  323 (351)
                      .+.+..++ ..+.++|.+||+.+|++||++.+++.|+|
T Consensus       219 ~~~~~~~~-~~~~~li~~~l~~~p~~Rp~~~~vl~~~~  255 (256)
T cd08218         219 PPVSSHYS-YDLRNLVSQLFKRNPRDRPSVNSILEKNF  255 (256)
T ss_pred             CCCcccCC-HHHHHHHHHHhhCChhhCcCHHHHhhCcC
Confidence            22333344 78999999999999999999999999986

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti

>cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2

Probab=100.00  E-value=1.4e-37  Score=274.47  Aligned_cols=253  Identities=16%  Similarity=0.121  Sum_probs=190.8

Q ss_pred             eeEEEEEEeeccCceEEEEEEecCCCCceEEEEecCCCCC-----hHHHHHHHHHhhhccccccccccceeeecc--cCe
Q 018699           48 KKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFP-----WEFYMYRQLDQRISGRERSSFGFAHRIHLY--SDY  120 (351)
Q Consensus        48 ~~Y~i~~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~~-----~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~  120 (351)
                      .+|++.+.||+|+||.||.|. +..+++.||+|.+.....     .+...+...........|+++.........  ...
T Consensus         2 ~~~~~~~~l~~g~~g~v~~~~-~~~~~~~v~ik~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~   80 (265)
T cd06652           2 TNWRLGKLLGQGAFGRVYLCY-DADTGRELAVKQVQFDPESPETSKEVNALECEIQLLKNLLHERIVQYYGCLRDPMERT   80 (265)
T ss_pred             CcceEeeEEecCCceEEEEEE-EcCCCcEEEEEEeecCcCCcccHHHHHHHHHHHHHHHhcCCCCeeeEEeEeccCCCce
Confidence            469999999999999999999 567889999998753321     112222222233445567777777665543  356


Q ss_pred             eEEEEEecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeeccCCCCC
Q 018699          121 SILVCDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSGP  200 (351)
Q Consensus       121 ~~lv~e~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~~~~~  200 (351)
                      ++++|||+++++|.+++..    ...+++..+..++.|++.|+.+||+++++|+||+|+||+++                
T Consensus        81 ~~~v~e~~~~~~L~~~l~~----~~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dl~p~nil~~----------------  140 (265)
T cd06652          81 LSIFMEHMPGGSIKDQLKS----YGALTENVTRKYTRQILEGVSYLHSNMIVHRDIKGANILRD----------------  140 (265)
T ss_pred             EEEEEEecCCCcHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEec----------------
Confidence            7899999999999999876    35688899999999999999999999999999999999998                


Q ss_pred             cccCCeEEeecCCccccccCCC-CccccccccCCCcccceeccCCCCCccchHhHHHHHHHHHHhCccccccccCCCCCc
Q 018699          201 WQDQGLCLVDWGRGIDLHLFPD-NMEFEGDCRTSGFRCIEMQEKKPWKFQVDTYGLCAIVHMMLHNSYMEIEKKASPDGG  279 (351)
Q Consensus       201 ~~~~~~~l~Dfg~a~~~~~~~~-~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~p~~~~~~~~~~~  279 (351)
                       .++.++|+|||.+........ ........++..|+|||.+.+..++.++|+|||||++|+|++|..||..........
T Consensus       141 -~~~~~~l~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~  219 (265)
T cd06652         141 -SVGNVKLGDFGASKRLQTICLSGTGMKSVTGTPYWMSPEVISGEGYGRKADIWSVGCTVVEMLTEKPPWAEFEAMAAIF  219 (265)
T ss_pred             -CCCCEEECcCccccccccccccccccccCCCCccccChhhhcCCCCCcchhHHHHHHHHHHHhhCCCCCCccchHHHHH
Confidence             677899999998864321111 112233457889999999988888999999999999999999999986542211100


Q ss_pred             -e-eeecCcchhhhhHHHHHHHHHHHHhcCCCCCChHHHHHHHHHHH
Q 018699          280 -L-VYLPKLSFKRYWKVELWKSLFTNLLNMSSGNDKEVLQNLQKSFQ  324 (351)
Q Consensus       280 -~-~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~~~~~  324 (351)
                       . ........+...+ ..+.++|.+||. +|++||++.++++|+|.
T Consensus       220 ~~~~~~~~~~~~~~~~-~~~~~~i~~~l~-~p~~Rp~~~~il~~~~~  264 (265)
T cd06652         220 KIATQPTNPVLPPHVS-DHCRDFLKRIFV-EAKLRPSADELLRHTFV  264 (265)
T ss_pred             HHhcCCCCCCCchhhC-HHHHHHHHHHhc-ChhhCCCHHHHhcCccc
Confidence             0 0111222344444 788999999995 99999999999999873

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re

>cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases

Probab=100.00  E-value=6e-38  Score=275.36  Aligned_cols=250  Identities=12%  Similarity=0.061  Sum_probs=189.0

Q ss_pred             CeeEEEEEEeeccCceEEEEEEecCCCCceEEEEecCCCCChHHHHHHHHHhhhccccccccccceeeecccCeeEEEEE
Q 018699           47 GKKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFPWEFYMYRQLDQRISGRERSSFGFAHRIHLYSDYSILVCD  126 (351)
Q Consensus        47 ~~~Y~i~~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e  126 (351)
                      ..+|++.+.||+|++|.||+|.+ . ++..+|+|++......+.....++. ......++++..........+..|+|||
T Consensus         3 ~~~~~~~~~lg~G~~~~v~~~~~-~-~~~~~~iK~~~~~~~~~~~~~~e~~-~l~~l~~~~i~~~~~~~~~~~~~~lv~e   79 (256)
T cd05059           3 PSELTFLKELGSGQFGVVHLGKW-R-GKIDVAIKMIREGAMSEDDFIEEAK-VMMKLSHPNLVQLYGVCTKQRPIFIVTE   79 (256)
T ss_pred             hHHcchhhhhccCCCceEEEeEe-c-CCccEEEEEeccCCCCHHHHHHHHH-HHHhCCCCCEEEEEEEEcCCCceEEEEe
Confidence            45799999999999999999985 3 4568999998765444333333322 3334567778777777777888999999


Q ss_pred             ecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeeccCCCCCcccCCe
Q 018699          127 YLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSGPWQDQGL  206 (351)
Q Consensus       127 ~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~~~~~~~~~~~  206 (351)
                      |+++++|.+++...   ...+++..++.++.|++.|++|||++|++|+||+|+||+++                 .++.+
T Consensus        80 ~~~~~~L~~~l~~~---~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dl~p~ni~i~-----------------~~~~~  139 (256)
T cd05059          80 YMANGCLLNYLRER---KGKLGTEWLLDMCSDVCEAMEYLESNGFIHRDLAARNCLVG-----------------EDNVV  139 (256)
T ss_pred             cCCCCCHHHHHHhc---ccCCCHHHHHHHHHHHHHHHHHHHHCCcccccccHhhEEEC-----------------CCCcE
Confidence            99999999998764   34789999999999999999999999999999999999999                 67789


Q ss_pred             EEeecCCccccccCCCCccccccccCCCcccceeccCCCCCccchHhHHHHHHHHHHh-CccccccccCCCCC-ceeeec
Q 018699          207 CLVDWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQEKKPWKFQVDTYGLCAIVHMMLH-NSYMEIEKKASPDG-GLVYLP  284 (351)
Q Consensus       207 ~l~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~-g~~p~~~~~~~~~~-~~~~~~  284 (351)
                      +|+|||.+..... ..........++..|+|||.+.+..++.++|+||||+++|++++ |..||......... ......
T Consensus       140 kl~dfg~~~~~~~-~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~~~  218 (256)
T cd05059         140 KVSDFGLARYVLD-DQYTSSQGTKFPVKWAPPEVFDYSRFSSKSDVWSFGVLMWEVFSEGKMPYERFSNSEVVESVSAGY  218 (256)
T ss_pred             EECCcccceeccc-ccccccCCCCCCccccCHHHhccCCCCchhhHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHcCC
Confidence            9999998864321 11111111223457999999988889999999999999999998 78888643322100 000011


Q ss_pred             CcchhhhhHHHHHHHHHHHHhcCCCCCChHHHHHHHH
Q 018699          285 KLSFKRYWKVELWKSLFTNLLNMSSGNDKEVLQNLQK  321 (351)
Q Consensus       285 ~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~~  321 (351)
                      ....+...+ ..+.+++.+||+.+|++||++.++++.
T Consensus       219 ~~~~~~~~~-~~~~~li~~cl~~~p~~Rpt~~~~l~~  254 (256)
T cd05059         219 RLYRPKLAP-TEVYTIMYSCWHEKPEDRPAFKKLLSQ  254 (256)
T ss_pred             cCCCCCCCC-HHHHHHHHHHhcCChhhCcCHHHHHHH
Confidence            112222334 789999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows

>cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7

Probab=100.00  E-value=3.7e-37  Score=271.69  Aligned_cols=253  Identities=17%  Similarity=0.133  Sum_probs=191.9

Q ss_pred             eeEEEEEEeeccCceEEEEEEecCCCCceEEEEecCCCCChH---HHHHHHHHhhhccccccccccceeeecccCeeEEE
Q 018699           48 KKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFPWE---FYMYRQLDQRISGRERSSFGFAHRIHLYSDYSILV  124 (351)
Q Consensus        48 ~~Y~i~~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~~~e---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv  124 (351)
                      ++|++.+.||.|++|.||+|. ...+|+.||+|.+.......   ...+......+....++++......+...+..++|
T Consensus         2 ~~y~~~~~lg~g~~~~v~~~~-~~~~~~~~~ik~~~~~~~~~~~~~~~~~~ei~~l~~~~~~~i~~~~~~~~~~~~~~lv   80 (267)
T cd08224           2 GNFKIEKKIGKGQFSVVYKAI-CLLDGRVVALKKVQIFEMMDAKARQDCLKEIDLLKQLDHPNVIKYLASFIENNELNIV   80 (267)
T ss_pred             CceeeeeeeccCCceEEEEEE-EcCCCCEEEEEEeecccccchhhHHHHHHHHHHHHhCCCCCeeeeeeeeecCCeEEEE
Confidence            589999999999999999999 45688999999876422111   11122222233445667777777777778889999


Q ss_pred             EEecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeeccCCCCCcccC
Q 018699          125 CDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSGPWQDQ  204 (351)
Q Consensus       125 ~e~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~~~~~~~~~  204 (351)
                      |||+++++|.+++......+..+++..++.++.+++.|+.|||+.|++|+||+|+||+++                 .++
T Consensus        81 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~dl~p~nil~~-----------------~~~  143 (267)
T cd08224          81 LELADAGDLSRMIKHFKKQKRLIPERTIWKYFVQLCSALEHMHSKRIMHRDIKPANVFIT-----------------ATG  143 (267)
T ss_pred             EecCCCCCHHHHHHHhcccCCCcCHHHHHHHHHHHHHHHHHHHhCCEecCCcChhhEEEC-----------------CCC
Confidence            999999999999876433346689999999999999999999999999999999999999                 677


Q ss_pred             CeEEeecCCccccccCCCCccccccccCCCcccceeccCCCCCccchHhHHHHHHHHHHhCccccccccCCCC---Ccee
Q 018699          205 GLCLVDWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQEKKPWKFQVDTYGLCAIVHMMLHNSYMEIEKKASPD---GGLV  281 (351)
Q Consensus       205 ~~~l~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~p~~~~~~~~~---~~~~  281 (351)
                      .++|+|||++......  ........++..|+|||.+.+..++.++|+|||||++|+|++|..||........   ....
T Consensus       144 ~~~l~d~~~~~~~~~~--~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~  221 (267)
T cd08224         144 VVKLGDLGLGRFFSSK--TTAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKIE  221 (267)
T ss_pred             cEEEeccceeeeccCC--CcccceecCCccccCHHHhccCCCCchhcHHHHHHHHHHHHHCCCCcccCCccHHHHHhhhh
Confidence            8999999987643211  1112334578899999999888899999999999999999999999865432100   0000


Q ss_pred             eecCcchhh-hhHHHHHHHHHHHHhcCCCCCChHHHHHHHH
Q 018699          282 YLPKLSFKR-YWKVELWKSLFTNLLNMSSGNDKEVLQNLQK  321 (351)
Q Consensus       282 ~~~~~~~~~-~~~~~~~~~li~~~L~~dP~~R~s~~e~l~~  321 (351)
                      .....+.+. ..+ ..+.++|.+||.++|++||++.+++..
T Consensus       222 ~~~~~~~~~~~~~-~~~~~~i~~cl~~~p~~Rp~~~~il~~  261 (267)
T cd08224         222 KCDYPPLPADHYS-EELRDLVSRCINPDPEKRPDISYVLQV  261 (267)
T ss_pred             cCCCCCCChhhcC-HHHHHHHHHHcCCCcccCCCHHHHHHH
Confidence            111112222 233 688999999999999999999988753

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a

>cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha

Probab=100.00  E-value=2.4e-37  Score=287.32  Aligned_cols=262  Identities=12%  Similarity=0.074  Sum_probs=193.6

Q ss_pred             eEEEEcCeeEEEEEEeeccCceEEEEEEec----CCCCceEEEEecCCCCChH-H-HHHHHHHhhhccc-ccccccccee
Q 018699           41 KTIEIGGKKYQIKGCAGQGGFAKVFKAYVN----GDPEDVVALKIQKPAFPWE-F-YMYRQLDQRISGR-ERSSFGFAHR  113 (351)
Q Consensus        41 ~~~~i~~~~Y~i~~~lg~G~~g~V~~a~~~----~~~~~~vaiK~~~~~~~~e-~-~~~~~~~~~~~~~-~~~~~~~~~~  113 (351)
                      .++.+..++|++.+.||.|+||.||+|.+.    ..++..||||++....... . ..+.++ +.+... .|++++....
T Consensus        30 ~~~~~~~~~~~~~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~Ei-~~l~~l~~HpnIv~l~~  108 (400)
T cd05105          30 SRWEFPRDGLVLGRILGSGAFGKVVEGTAYGLSRSQPVMKVAVKMLKPTARSSEKQALMSEL-KIMTHLGPHLNIVNLLG  108 (400)
T ss_pred             CceeccccceehhheecCCCCceEEEEEEcccCCCCCceEEEEEecCCCCChHHHHHHHHHH-HHHHhcCCCCCeeeEEE
Confidence            467788899999999999999999999852    1234579999987543322 1 122222 223333 4889998888


Q ss_pred             eecccCeeEEEEEecCCCCHHHHHHHHHhh--------------------------------------------------
Q 018699          114 IHLYSDYSILVCDYLSQGTLQDAINSYVVI--------------------------------------------------  143 (351)
Q Consensus       114 ~~~~~~~~~lv~e~~~~~sL~~~l~~~~~~--------------------------------------------------  143 (351)
                      .+...+..|+||||+++|+|.+++......                                                  
T Consensus       109 ~~~~~~~~~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  188 (400)
T cd05105         109 ACTKSGPIYIITEYCFYGDLVNYLHKNRDNFLSRHPEKPKKDLDIFGINPADESTRSYVILSFENKGDYMDMKQADTTQY  188 (400)
T ss_pred             EEccCCceEEEEEecCCCcHHHHHHHhhhhhhccccccccccccccCCCcccccccchhhhhhccccccccccccccccc
Confidence            888888999999999999999988753210                                                  


Q ss_pred             ------------------------------------------CCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcE
Q 018699          144 ------------------------------------------GKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNL  181 (351)
Q Consensus       144 ------------------------------------------~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Ni  181 (351)
                                                                ...+++..+..++.|++.|+.|||+++|+|+||+|+||
T Consensus       189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivH~dikp~Ni  268 (400)
T cd05105         189 VPMLEIKEASKYSDIQRSNYDRPASYKGSNDSEVKNLLSDDGSEGLTTLDLLSFTYQVARGMEFLASKNCVHRDLAARNV  268 (400)
T ss_pred             chhhhhhhhhhhhhcccCcccccccccCcchhhHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCChHhE
Confidence                                                      12467788899999999999999999999999999999


Q ss_pred             EEeecCCcceeeccCCCCCcccCCeEEeecCCccccccCCCCccccccccCCCcccceeccCCCCCccchHhHHHHHHHH
Q 018699          182 LIRYARDELTVLDHDRSGPWQDQGLCLVDWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQEKKPWKFQVDTYGLCAIVHM  261 (351)
Q Consensus       182 ll~~~~~~~~~~~~~~~~~~~~~~~~l~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~  261 (351)
                      +++                 .++.++|+|||++................++..|+|||.+.+..++.++|||||||++|+
T Consensus       269 ll~-----------------~~~~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwSlGvil~e  331 (400)
T cd05105         269 LLA-----------------QGKIVKICDFGLARDIMHDSNYVSKGSTFLPVKWMAPESIFDNLYTTLSDVWSYGILLWE  331 (400)
T ss_pred             EEe-----------------CCCEEEEEeCCcceeccccccccccCCcCCCcceEChhhhcCCCCCchhhHHHHHHHHHH
Confidence            999                 667799999999864322111112223346778999999988889999999999999999


Q ss_pred             HHh-CccccccccCCCCC--ceeeecCcchhhhhHHHHHHHHHHHHhcCCCCCChHHHHHHHH
Q 018699          262 MLH-NSYMEIEKKASPDG--GLVYLPKLSFKRYWKVELWKSLFTNLLNMSSGNDKEVLQNLQK  321 (351)
Q Consensus       262 l~~-g~~p~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~~  321 (351)
                      |++ |..||.........  ..........+..++ ..+.++|.+||+.||++||++.++.+.
T Consensus       332 llt~g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~l~~li~~cl~~dP~~RPt~~~l~~~  393 (400)
T cd05105         332 IFSLGGTPYPGMIVDSTFYNKIKSGYRMAKPDHAT-QEVYDIMVKCWNSEPEKRPSFLHLSDI  393 (400)
T ss_pred             HHHCCCCCCcccchhHHHHHHHhcCCCCCCCccCC-HHHHHHHHHHCccCHhHCcCHHHHHHH
Confidence            997 88888653221000  000001112223334 788999999999999999998887653

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-

>cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1

Probab=100.00  E-value=1.4e-37  Score=274.65  Aligned_cols=252  Identities=17%  Similarity=0.136  Sum_probs=194.3

Q ss_pred             eEEEEEEeeccCceEEEEEEecCCCCceEEEEecCCCCCh------HHHHHHHHHhhhccccccccccceeeecccCeeE
Q 018699           49 KYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFPW------EFYMYRQLDQRISGRERSSFGFAHRIHLYSDYSI  122 (351)
Q Consensus        49 ~Y~i~~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~~~------e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  122 (351)
                      +|+..+.||+|++|.||+|. +..+++.||+|++......      ....+...........+++++....+...++..+
T Consensus         1 ~~~~~~~lg~g~~~~v~~~~-~~~~~~~~alk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~   79 (268)
T cd06630           1 EWLKGQQLGTGAFSSCYQAR-DVKTGTLMAVKQVTYVRNTSSEQEEVVEALRKEIRLMARLNHPHIIRMLGATCEDSHFN   79 (268)
T ss_pred             CccccceecCcCceEEEEEE-EcCCCcEEEEEEeecccCCchhHHHHHHHHHHHHHHHHHcCCCceehhhceeccCCeEE
Confidence            48889999999999999999 5678899999998643311      1112222223344456788888888888888999


Q ss_pred             EEEEecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeeccCCCCCcc
Q 018699          123 LVCDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSGPWQ  202 (351)
Q Consensus       123 lv~e~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~~~~~~~  202 (351)
                      +|+||+++++|.+++..    ..++++..++.++.|++.|+.+||++|++|+||+|+||+++                 .
T Consensus        80 ~v~e~~~~~~L~~~l~~----~~~~~~~~~~~~~~ql~~al~~LH~~~i~H~~i~~~nil~~-----------------~  138 (268)
T cd06630          80 LFVEWMAGGSVSHLLSK----YGAFKEAVIINYTEQLLRGLSYLHENQIIHRDVKGANLLID-----------------S  138 (268)
T ss_pred             EEEeccCCCcHHHHHHH----hCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEc-----------------C
Confidence            99999999999999976    36789999999999999999999999999999999999997                 3


Q ss_pred             c-CCeEEeecCCccccccCCC--CccccccccCCCcccceeccCCCCCccchHhHHHHHHHHHHhCccccccccCCCCCc
Q 018699          203 D-QGLCLVDWGRGIDLHLFPD--NMEFEGDCRTSGFRCIEMQEKKPWKFQVDTYGLCAIVHMMLHNSYMEIEKKASPDGG  279 (351)
Q Consensus       203 ~-~~~~l~Dfg~a~~~~~~~~--~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~p~~~~~~~~~~~  279 (351)
                      + ..++|+|||.+........  ........++..|+|||.+.+..++.++|+||||+++|+|++|..||..........
T Consensus       139 ~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~  218 (268)
T cd06630         139 TGQRLRIADFGAAARLAAKGTGAGEFQGQLLGTIAFMAPEVLRGEQYGRSCDVWSVGCVIIEMATAKPPWNAEKHSNHLA  218 (268)
T ss_pred             CCCEEEEcccccccccccccccCCccccccccccceeCHhHhccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCcchHH
Confidence            3 3589999998865432211  111223457889999999988888999999999999999999999986443221111


Q ss_pred             ee-----eecCcchhhhhHHHHHHHHHHHHhcCCCCCChHHHHHHHHHH
Q 018699          280 LV-----YLPKLSFKRYWKVELWKSLFTNLLNMSSGNDKEVLQNLQKSF  323 (351)
Q Consensus       280 ~~-----~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~~~~  323 (351)
                      ..     .......+...+ ..+.+++.+||..+|++||++.+++.|+|
T Consensus       219 ~~~~~~~~~~~~~~~~~~~-~~~~~~i~~~l~~~p~~R~~~~~ll~~~~  266 (268)
T cd06630         219 LIFKIASATTAPSIPEHLS-PGLRDVTLRCLELQPEDRPPSRELLKHPV  266 (268)
T ss_pred             HHHHHhccCCCCCCchhhC-HHHHHHHHHHcCCCcccCcCHHHHhcCcc
Confidence            00     111223333344 78999999999999999999999999986

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their

>cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn

Probab=100.00  E-value=7.5e-38  Score=275.43  Aligned_cols=253  Identities=12%  Similarity=0.103  Sum_probs=189.7

Q ss_pred             EEcCeeEEEEEEeeccCceEEEEEEecCCCCceEEEEecCCCCChHHHHHHHHHhhhccccccccccceeeecccCeeEE
Q 018699           44 EIGGKKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFPWEFYMYRQLDQRISGRERSSFGFAHRIHLYSDYSIL  123 (351)
Q Consensus        44 ~i~~~~Y~i~~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  123 (351)
                      .+..++|++.++||+|++|.||+|.+  .++..||+|.+....... ..+...........|+++..........+..++
T Consensus         2 ~~~~~~~~~~~~lg~g~~g~v~~~~~--~~~~~v~iK~~~~~~~~~-~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l   78 (261)
T cd05072           2 EIPRESIKLVKKLGAGQFGEVWMGYY--NNSTKVAVKTLKPGTMSV-QAFLEEANLMKTLQHDKLVRLYAVVTKEEPIYI   78 (261)
T ss_pred             cCchHHeEEeeecCCcCCceEEEEEe--cCCceEEEEEccCCchhH-HHHHHHHHHHHhCCCCCeeeEEEEEcCCCCcEE
Confidence            45678999999999999999999984  345679999877543322 222222233344567788887777777888999


Q ss_pred             EEEecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeeccCCCCCccc
Q 018699          124 VCDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSGPWQD  203 (351)
Q Consensus       124 v~e~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~~~~~~~~  203 (351)
                      +|||+++++|.+++....  +..++...+..++.|++.|++|||+.+++|+||+|+||+++                 .+
T Consensus        79 v~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~~~~l~~~l~~LH~~~i~H~dl~p~nili~-----------------~~  139 (261)
T cd05072          79 ITEYMAKGSLLDFLKSDE--GGKVLLPKLIDFSAQIAEGMAYIERKNYIHRDLRAANVLVS-----------------ES  139 (261)
T ss_pred             EEecCCCCcHHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHHCCeeccccchhhEEec-----------------CC
Confidence            999999999999987642  45688889999999999999999999999999999999999                 67


Q ss_pred             CCeEEeecCCccccccCCCCccccccccCCCcccceeccCCCCCccchHhHHHHHHHHHHh-CccccccccCCCCCce-e
Q 018699          204 QGLCLVDWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQEKKPWKFQVDTYGLCAIVHMMLH-NSYMEIEKKASPDGGL-V  281 (351)
Q Consensus       204 ~~~~l~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~-g~~p~~~~~~~~~~~~-~  281 (351)
                      +.++|+|||.+...... .........++..|+|||.+.+..++.++|||||||++|+|++ |..||........... .
T Consensus       140 ~~~~l~dfg~~~~~~~~-~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~~~~~~~~~  218 (261)
T cd05072         140 LMCKIADFGLARVIEDN-EYTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLYEIVTYGKIPYPGMSNSDVMSALQ  218 (261)
T ss_pred             CcEEECCCccceecCCC-ceeccCCCccceecCCHHHhccCCCChhhhhhhhHHHHHHHHccCCCCCCCCCHHHHHHHHH
Confidence            78999999998653211 1111222335667999999988888999999999999999998 8999864332110000 0


Q ss_pred             eecCcchhhhhHHHHHHHHHHHHhcCCCCCChHHHHHHH
Q 018699          282 YLPKLSFKRYWKVELWKSLFTNLLNMSSGNDKEVLQNLQ  320 (351)
Q Consensus       282 ~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~  320 (351)
                      .....+.....+ ..+.+++.+||+++|++||++.+++.
T Consensus       219 ~~~~~~~~~~~~-~~~~~li~~~l~~~p~~Rp~~~~i~~  256 (261)
T cd05072         219 RGYRMPRMENCP-DELYDIMKTCWKEKAEERPTFDYLQS  256 (261)
T ss_pred             cCCCCCCCCCCC-HHHHHHHHHHccCCcccCcCHHHHHH
Confidence            000111112233 77899999999999999999988864

Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa

>cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes

Probab=100.00  E-value=1e-37  Score=273.21  Aligned_cols=246  Identities=12%  Similarity=0.082  Sum_probs=183.3

Q ss_pred             EEeeccCceEEEEEEecCCCCceEEEEecCCCCChHH-HHHHHHHhhhccccccccccceeeecccCeeEEEEEecCCCC
Q 018699           54 GCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFPWEF-YMYRQLDQRISGRERSSFGFAHRIHLYSDYSILVCDYLSQGT  132 (351)
Q Consensus        54 ~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~~~e~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~s  132 (351)
                      +.||+|+||+||+|. +..+++.||+|.+......+. .........+....|+++.....++...+..++||||+++++
T Consensus         1 ~~lg~g~~g~vy~~~-~~~~~~~~a~k~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~   79 (252)
T cd05084           1 ERIGRGNFGEVFSGR-LRADNTPVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVMELVQGGD   79 (252)
T ss_pred             CccCcccCccEEEEE-EecCCceEEEEecCccCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEcCCCCeEEEEeeccCCc
Confidence            368999999999999 466789999998775543321 112222233445678888888888888889999999999999


Q ss_pred             HHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeeccCCCCCcccCCeEEeecC
Q 018699          133 LQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSGPWQDQGLCLVDWG  212 (351)
Q Consensus       133 L~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~~~~~~~~~~~~l~Dfg  212 (351)
                      |.+++...   +..+++..++.++.|++.||.|||++|++|+||+|+||+++                 .++.++|+|||
T Consensus        80 L~~~~~~~---~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dl~p~nil~~-----------------~~~~~kl~dfg  139 (252)
T cd05084          80 FLTFLRTE---GPRLKVKELIQMVENAAAGMEYLESKHCIHRDLAARNCLVT-----------------EKNVLKISDFG  139 (252)
T ss_pred             HHHHHHhC---CCCCCHHHHHHHHHHHHHHHHHHHhCCccccccchheEEEc-----------------CCCcEEECccc
Confidence            99998753   45688999999999999999999999999999999999998                 66779999999


Q ss_pred             CccccccCCCCccccccccCCCcccceeccCCCCCccchHhHHHHHHHHHHh-CccccccccCCCCCc-eeeecCcchhh
Q 018699          213 RGIDLHLFPDNMEFEGDCRTSGFRCIEMQEKKPWKFQVDTYGLCAIVHMMLH-NSYMEIEKKASPDGG-LVYLPKLSFKR  290 (351)
Q Consensus       213 ~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~-g~~p~~~~~~~~~~~-~~~~~~~~~~~  290 (351)
                      .+.................+..|+|||.+.+..++.++|||||||++|+|++ |..||.......... .........+.
T Consensus       140 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~e~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~  219 (252)
T cd05084         140 MSREEEDGVYASTGGMKQIPVKWTAPEALNYGRYSSESDVWSFGILLWEAFSLGAVPYANLSNQQTREAIEQGVRLPCPE  219 (252)
T ss_pred             cCcccccccccccCCCCCCceeecCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccCHHHHHHHHHcCCCCCCcc
Confidence            8864321100000011122456999999988888999999999999999997 888875433210000 00011122333


Q ss_pred             hhHHHHHHHHHHHHhcCCCCCChHHHHHHHH
Q 018699          291 YWKVELWKSLFTNLLNMSSGNDKEVLQNLQK  321 (351)
Q Consensus       291 ~~~~~~~~~li~~~L~~dP~~R~s~~e~l~~  321 (351)
                      ..+ ..+.+|+.+||+++|++||++.++++.
T Consensus       220 ~~~-~~~~~li~~~l~~~p~~Rps~~~~~~~  249 (252)
T cd05084         220 LCP-DAVYRLMERCWEYDPGQRPSFSTVHQE  249 (252)
T ss_pred             cCC-HHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence            334 788999999999999999999999754

Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular

>KOG0986 consensus G protein-coupled receptor kinase [Signal transduction mechanisms]

Probab=100.00  E-value=2.8e-39  Score=284.88  Aligned_cols=287  Identities=17%  Similarity=0.211  Sum_probs=218.2

Q ss_pred             ccccccccccccccccccccccCCC------c---ceEEEEcCeeEEEEEEeeccCceEEEEEEecCCCCceEEEEecCC
Q 018699           14 KFEGYHRSNKVYSGKVALSSLNNSS------R---NKTIEIGGKKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKP   84 (351)
Q Consensus        14 ~~~~~~~~~~~~~~~~~~~~~~~~~------~---~~~~~i~~~~Y~i~~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~   84 (351)
                      -|+.+.+....+++..+......+.      +   .....+..+.|...++||+|+||.|+-|+ ...+|+.+|+|.+.+
T Consensus       142 lf~~~~~~~~~~L~~~pF~~f~~S~yf~rFlQWK~lE~qpvt~n~F~~~RvlGkGGFGEV~acq-vraTGKMYAcKkL~K  220 (591)
T KOG0986|consen  142 LFQPLARAICAYLRGDPFQEFLESDYFTRFLQWKWLELQPVTKNTFRVYRVLGKGGFGEVCACQ-VRATGKMYACKKLDK  220 (591)
T ss_pred             hhHHHHHHHHHHhccchHhHhHHHHHHHHHHHHHHHHhhhccccceeeeEEEecccccceeEEE-EecchhhHHHHHHHH
Confidence            3344444445555555555444333      1   11233456789999999999999999999 689999999998764


Q ss_pred             CCCh--HHHHHHHHHh-hhccccccccccceeeecccCeeEEEEEecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHH
Q 018699           85 AFPW--EFYMYRQLDQ-RISGRERSSFGFAHRIHLYSDYSILVCDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLC  161 (351)
Q Consensus        85 ~~~~--e~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~  161 (351)
                      ....  ..+.+..... .+.....+.++...--+...+.+|+|+..|.||+|.-.|-...  ++.+++..++.++.+|++
T Consensus       221 KRiKkr~ge~maLnEk~iL~kV~s~FiVslaYAfeTkd~LClVLtlMNGGDLkfHiyn~g--~~gF~e~ra~FYAAEi~c  298 (591)
T KOG0986|consen  221 KRIKKRKGETMALNEKQILEKVSSPFIVSLAYAFETKDALCLVLTLMNGGDLKFHIYNHG--NPGFDEQRARFYAAEIIC  298 (591)
T ss_pred             HHHHHhhhhHHhhHHHHHHHHhccCcEEEEeeeecCCCceEEEEEeecCCceeEEeeccC--CCCCchHHHHHHHHHHHh
Confidence            3211  0111111111 1112223344555445567899999999999999998887654  457999999999999999


Q ss_pred             HHHHHHHCCceecCCCCCcEEEeecCCcceeeccCCCCCcccCCeEEeecCCccccccCCCCccccccccCCCcccceec
Q 018699          162 ILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSGPWQDQGLCLVDWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQ  241 (351)
Q Consensus       162 ~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~~~~~~~~~~~~l~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~  241 (351)
                      ||.+||..+||+||+||+||++|                 ..|.+.|+|+|+|..+   +++......+||.+|||||++
T Consensus       299 GLehlH~~~iVYRDLKPeNILLD-----------------d~GhvRISDLGLAvei---~~g~~~~~rvGT~GYMAPEvl  358 (591)
T KOG0986|consen  299 GLEHLHRRRIVYRDLKPENILLD-----------------DHGHVRISDLGLAVEI---PEGKPIRGRVGTVGYMAPEVL  358 (591)
T ss_pred             hHHHHHhcceeeccCChhheeec-----------------cCCCeEeeccceEEec---CCCCccccccCcccccCHHHH
Confidence            99999999999999999999999                 8899999999999754   456677778999999999999


Q ss_pred             cCCCCCccchHhHHHHHHHHHHhCccccccccCCCC----CceeeecCcchhhhhHHHHHHHHHHHHhcCCCCCChH---
Q 018699          242 EKKPWKFQVDTYGLCAIVHMMLHNSYMEIEKKASPD----GGLVYLPKLSFKRYWKVELWKSLFTNLLNMSSGNDKE---  314 (351)
Q Consensus       242 ~~~~~~~~~DiwslG~il~~l~~g~~p~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~s---  314 (351)
                      .+..|++..|+|||||++|+|+.|+.||........    .......+..+++.++ +++++|...+|.+||.+|..   
T Consensus       359 ~ne~Y~~s~Dwf~lGCllYemi~G~sPFr~~KeKvk~eEvdrr~~~~~~ey~~kFS-~eakslc~~LL~Kdp~~RLGcrg  437 (591)
T KOG0986|consen  359 QNEVYDFSPDWFSLGCLLYEMIAGHSPFRQRKEKVKREEVDRRTLEDPEEYSDKFS-EEAKSLCEGLLTKDPEKRLGCRG  437 (591)
T ss_pred             cCCcccCCccHHHHHhHHHHHHcccCchhhhhhhhhHHHHHHHHhcchhhcccccC-HHHHHHHHHHHccCHHHhccCCC
Confidence            998899999999999999999999999986554322    2234456677888888 99999999999999999974   


Q ss_pred             --HHHHHHHHHH
Q 018699          315 --VLQNLQKSFQ  324 (351)
Q Consensus       315 --~~e~l~~~~~  324 (351)
                        +.++-+|||.
T Consensus       438 ~ga~evk~HpfF  449 (591)
T KOG0986|consen  438 EGAQEVKEHPFF  449 (591)
T ss_pred             cCcchhhhCccc
Confidence              5677778863

>cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases

Probab=100.00  E-value=8.6e-38  Score=277.41  Aligned_cols=260  Identities=13%  Similarity=0.079  Sum_probs=193.0

Q ss_pred             EEcCeeEEEEEEeeccCceEEEEEEecC----CCCceEEEEecCCCCChHH-HHHHHHHhhhccccccccccceeeeccc
Q 018699           44 EIGGKKYQIKGCAGQGGFAKVFKAYVNG----DPEDVVALKIQKPAFPWEF-YMYRQLDQRISGRERSSFGFAHRIHLYS  118 (351)
Q Consensus        44 ~i~~~~Y~i~~~lg~G~~g~V~~a~~~~----~~~~~vaiK~~~~~~~~e~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~  118 (351)
                      ++..++|++.+.||.|+||.||+|.+..    .++..||+|.+........ .........+....++++.....+....
T Consensus         2 ~~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~   81 (277)
T cd05032           2 ELPREKITLIRELGQGSFGMVYEGLAKGVVKGEPETRVAIKTVNENASMRERIEFLNEASVMKEFNCHHVVRLLGVVSTG   81 (277)
T ss_pred             ccchHHeeEEeEecCCCCceEEEEEEeccCCCCcceeEEEEecCCccCHHHHHHHHHHHHHHHhCCCCceeEEEEEEcCC
Confidence            4567899999999999999999998632    3457899999875532221 1111222233445677888888888778


Q ss_pred             CeeEEEEEecCCCCHHHHHHHHHhh------CCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCccee
Q 018699          119 DYSILVCDYLSQGTLQDAINSYVVI------GKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTV  192 (351)
Q Consensus       119 ~~~~lv~e~~~~~sL~~~l~~~~~~------~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~  192 (351)
                      ...++||||+++++|.+++......      ...+++..++.++.|++.|+.|||+.+++|+||+|+||+++        
T Consensus        82 ~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~di~p~nill~--------  153 (277)
T cd05032          82 QPTLVVMELMAKGDLKSYLRSRRPEAENNPGLGPPTLQKFIQMAAEIADGMAYLAAKKFVHRDLAARNCMVA--------  153 (277)
T ss_pred             CCcEEEEecCCCCCHHHHHHhcccchhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccccChheEEEc--------
Confidence            8899999999999999998753210      12467888999999999999999999999999999999999        


Q ss_pred             eccCCCCCcccCCeEEeecCCccccccCCCCccccccccCCCcccceeccCCCCCccchHhHHHHHHHHHHh-Ccccccc
Q 018699          193 LDHDRSGPWQDQGLCLVDWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQEKKPWKFQVDTYGLCAIVHMMLH-NSYMEIE  271 (351)
Q Consensus       193 ~~~~~~~~~~~~~~~l~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~-g~~p~~~  271 (351)
                               .++.++|+|||++................++..|+|||.+.+..++.++|||||||++|++++ |..||..
T Consensus       154 ---------~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~  224 (277)
T cd05032         154 ---------EDLTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTKSDVWSFGVVLWEMATLAEQPYQG  224 (277)
T ss_pred             ---------CCCCEEECCcccchhhccCcccccCCCCCccccccCHHHHhcCCCCcccchHHHHHHHHHhhccCCCCCcc
Confidence                     778899999998864322111111223346778999999988888999999999999999998 8888864


Q ss_pred             ccCCCCCcee-eecCcchhhhhHHHHHHHHHHHHhcCCCCCChHHHHHHHH
Q 018699          272 KKASPDGGLV-YLPKLSFKRYWKVELWKSLFTNLLNMSSGNDKEVLQNLQK  321 (351)
Q Consensus       272 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~~  321 (351)
                      .......... .......+..++ ..+.++|.+||+.+|++||++.+++..
T Consensus       225 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~li~~~l~~~p~~Rpt~~~l~~~  274 (277)
T cd05032         225 LSNEEVLKFVIDGGHLDLPENCP-DKLLELMRMCWQYNPKMRPTFLEIVSS  274 (277)
T ss_pred             CCHHHHHHHHhcCCCCCCCCCCC-HHHHHHHHHHcCCChhhCCCHHHHHHH
Confidence            3322100000 111222333344 788999999999999999999999764

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological

>cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase

Probab=100.00  E-value=9.9e-38  Score=281.08  Aligned_cols=254  Identities=17%  Similarity=0.126  Sum_probs=191.7

Q ss_pred             eeEEEEEEeeccCceEEEEEEecCCCCceEEEEecCCCCCh---HHHHHHHHHhhhccccccccccceeeecccCeeEEE
Q 018699           48 KKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFPW---EFYMYRQLDQRISGRERSSFGFAHRIHLYSDYSILV  124 (351)
Q Consensus        48 ~~Y~i~~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~~~---e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv  124 (351)
                      ++|++.+.||.|+||.||+|. +..+++.|++|.+......   +...+...........+++++.....+..++..++|
T Consensus         1 ~~y~~~~~l~~g~~~~v~~~~-~~~~~~~v~ik~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv   79 (305)
T cd05609           1 EDFETIKLISNGAYGAVYLVR-HKETRQRFAMKKINKQNLILRNQIQQVFVERDILTFAENPFVVSMFCSFETKRHLCMV   79 (305)
T ss_pred             CCceEeeEeecCCCeeEEEEE-ECCCCcEEEEEEeehhhhhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEecCCEEEEE
Confidence            369999999999999999999 5777899999988754321   111222222334455677888877777778899999


Q ss_pred             EEecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeeccCCCCCcccC
Q 018699          125 CDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSGPWQDQ  204 (351)
Q Consensus       125 ~e~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~~~~~~~~~  204 (351)
                      |||++|++|.+++..    ...+++..+..++.|++.|+.|||++|++|+||+|+||+++                 .++
T Consensus        80 ~e~~~g~~L~~~l~~----~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~NIll~-----------------~~~  138 (305)
T cd05609          80 MEYVEGGDCATLLKN----IGALPVDMARMYFAETVLALEYLHNYGIVHRDLKPDNLLIT-----------------SMG  138 (305)
T ss_pred             EecCCCCcHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCchHHEEEC-----------------CCC
Confidence            999999999999977    46789999999999999999999999999999999999998                 677


Q ss_pred             CeEEeecCCccccccCCC-------------CccccccccCCCcccceeccCCCCCccchHhHHHHHHHHHHhCcccccc
Q 018699          205 GLCLVDWGRGIDLHLFPD-------------NMEFEGDCRTSGFRCIEMQEKKPWKFQVDTYGLCAIVHMMLHNSYMEIE  271 (351)
Q Consensus       205 ~~~l~Dfg~a~~~~~~~~-------------~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~p~~~  271 (351)
                      .++|+|||++........             ........++..|+|||.+.+..++.++|+|||||++|+|++|..||..
T Consensus       139 ~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~pf~~  218 (305)
T cd05609         139 HIKLTDFGLSKIGLMSLTTNLYEGHIEKDTREFLDKQVCGTPEYIAPEVILRQGYGKPVDWWAMGIILYEFLVGCVPFFG  218 (305)
T ss_pred             CEEEeeCCCccccCcCccccccccccccchhhccccCCccCccccCchhccCCCCCchhhHHHHHHHHHHHHhCCCCCCC
Confidence            899999998753110000             0001123567889999999888889999999999999999999999875


Q ss_pred             ccCCCCCceeee---cCcchhhhhHHHHHHHHHHHHhcCCCCCChH---HHHHHHHHHH
Q 018699          272 KKASPDGGLVYL---PKLSFKRYWKVELWKSLFTNLLNMSSGNDKE---VLQNLQKSFQ  324 (351)
Q Consensus       272 ~~~~~~~~~~~~---~~~~~~~~~~~~~~~~li~~~L~~dP~~R~s---~~e~l~~~~~  324 (351)
                      ............   ..+..+...+ ..+.++|.+||++||++||+   +.+++.|+|.
T Consensus       219 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~li~~~l~~~P~~R~~~~~~~~ll~~~~~  276 (305)
T cd05609         219 DTPEELFGQVISDDIEWPEGDEALP-ADAQDLISRLLRQNPLERLGTGGAFEVKQHRFF  276 (305)
T ss_pred             CCHHHHHHHHHhcccCCCCccccCC-HHHHHHHHHHhccChhhccCccCHHHHHhCccc
Confidence            432210000000   0011111223 77899999999999999998   6888899864

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a

>cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2

Probab=100.00  E-value=1.2e-37  Score=274.25  Aligned_cols=254  Identities=15%  Similarity=0.096  Sum_probs=195.5

Q ss_pred             eEEEEEEeeccCceEEEEEEecCCCCceEEEEecCCCCChHH--HHHHHHHhhhccccccccccceeeec--ccCeeEEE
Q 018699           49 KYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFPWEF--YMYRQLDQRISGRERSSFGFAHRIHL--YSDYSILV  124 (351)
Q Consensus        49 ~Y~i~~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~~~e~--~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~lv  124 (351)
                      +|++.+.||.|++|+||+|. +..+++.||+|.+......+.  ..+...........++++........  .+...+++
T Consensus         1 ~y~~~~~lg~g~~~~v~~~~-~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~~~   79 (265)
T cd08217           1 DYEVLETIGKGSFGTVRKVR-RKSDGKILVWKEIDYGNMTEKEKQQLVSEVNILRELKHPNIVRYYDRIIDRSNQTLYIV   79 (265)
T ss_pred             CceeeeeeccCCCeEEEEee-ecCCCCEEEEEEEecccCCHHHHHHHHHHHHHHHhcCCCccceeeeeeecCCCCEEEEE
Confidence            58999999999999999999 567789999999865433222  22222223344456677776665443  35678999


Q ss_pred             EEecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHH-----HCCceecCCCCCcEEEeecCCcceeeccCCCC
Q 018699          125 CDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLH-----DVGIIHGDFKPDNLLIRYARDELTVLDHDRSG  199 (351)
Q Consensus       125 ~e~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH-----~~~i~H~dl~p~Nill~~~~~~~~~~~~~~~~  199 (351)
                      |||+++++|.+++......+..+++..++.++.|++.|+.+||     +.+++|+||+|+||+++               
T Consensus        80 ~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~~~~~~i~h~dl~p~nili~---------------  144 (265)
T cd08217          80 MEYCEGGDLAQLIQKCKKERKYIEEEFIWRILTQLLLALYECHNRSDPGNTVLHRDLKPANIFLD---------------  144 (265)
T ss_pred             ehhccCCCHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhcCccccCcceecCCCHHHEEEe---------------
Confidence            9999999999999876544568999999999999999999999     89999999999999999               


Q ss_pred             CcccCCeEEeecCCccccccCCCCccccccccCCCcccceeccCCCCCccchHhHHHHHHHHHHhCccccccccCCCCCc
Q 018699          200 PWQDQGLCLVDWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQEKKPWKFQVDTYGLCAIVHMMLHNSYMEIEKKASPDGG  279 (351)
Q Consensus       200 ~~~~~~~~l~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~p~~~~~~~~~~~  279 (351)
                        .++.++|+|||++......  ........+++.|+|||.+.+..++.++|+||||+++|+|++|..||..........
T Consensus       145 --~~~~~kl~d~g~~~~~~~~--~~~~~~~~~~~~~~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~  220 (265)
T cd08217         145 --ANNNVKLGDFGLAKILGHD--SSFAKTYVGTPYYMSPEQLNHMSYDEKSDIWSLGCLIYELCALSPPFTARNQLQLAS  220 (265)
T ss_pred             --cCCCEEEecccccccccCC--cccccccccCCCccChhhhcCCCCCchhHHHHHHHHHHHHHHCCCcccCcCHHHHHH
Confidence              6788999999988654321  111334568899999999988888999999999999999999999987543210000


Q ss_pred             e-eeecCcchhhhhHHHHHHHHHHHHhcCCCCCChHHHHHHHHHH
Q 018699          280 L-VYLPKLSFKRYWKVELWKSLFTNLLNMSSGNDKEVLQNLQKSF  323 (351)
Q Consensus       280 ~-~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~~~~  323 (351)
                      . ........+..++ ..+.+++.+||..+|++||++.+++.|||
T Consensus       221 ~~~~~~~~~~~~~~~-~~~~~l~~~~l~~~p~~Rp~~~~il~~~~  264 (265)
T cd08217         221 KIKEGKFRRIPYRYS-SELNEVIKSMLNVDPDKRPSTEELLQLPL  264 (265)
T ss_pred             HHhcCCCCCCccccC-HHHHHHHHHHccCCcccCCCHHHHhhCCC
Confidence            0 0111122333444 78999999999999999999999999986

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi

>cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome

Probab=100.00  E-value=1e-37  Score=273.89  Aligned_cols=251  Identities=13%  Similarity=0.050  Sum_probs=189.9

Q ss_pred             cCeeEEEEEEeeccCceEEEEEEecCCCCceEEEEecCCCCChHHHHHHHHHhhhccccccccccceeeecccCeeEEEE
Q 018699           46 GGKKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFPWEFYMYRQLDQRISGRERSSFGFAHRIHLYSDYSILVC  125 (351)
Q Consensus        46 ~~~~Y~i~~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~  125 (351)
                      ..++|++.+.||+|++|+||.|.+.  .+..+|+|.+......+.....++ .......+++++....+....+..++||
T Consensus         2 ~~~~~~~~~~lg~G~~~~vy~~~~~--~~~~~aik~~~~~~~~~~~~~~e~-~~l~~l~h~~i~~~~~~~~~~~~~~lv~   78 (256)
T cd05113           2 DPKDLTFLKELGTGQFGVVKYGKWR--GQYDVAIKMIKEGSMSEDEFIEEA-KVMMKLSHEKLVQLYGVCTKQRPIYIVT   78 (256)
T ss_pred             ChHHeEEeeEecCcccceEEEEEec--CCCcEEEEEcCCCcccHHHHHHHH-HHHhcCCCCCeeeEEEEEccCCCcEEEE
Confidence            3467999999999999999999853  345699998876544333333332 3344556788888888877788889999


Q ss_pred             EecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeeccCCCCCcccCC
Q 018699          126 DYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSGPWQDQG  205 (351)
Q Consensus       126 e~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~~~~~~~~~~  205 (351)
                      ||+.+++|.+++...   ...+++..++.++.|++.|++|||+.|++|+||+|+||+++                 .++.
T Consensus        79 e~~~~~~l~~~i~~~---~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~nili~-----------------~~~~  138 (256)
T cd05113          79 EYMSNGCLLNYLREH---GKRFQPSQLLEMCKDVCEGMAYLESKQFIHRDLAARNCLVD-----------------DQGC  138 (256)
T ss_pred             EcCCCCcHHHHHHhc---CCCCCHHHHHHHHHHHHHHHHHHHhCCeeccccCcceEEEc-----------------CCCC
Confidence            999999999998764   34689999999999999999999999999999999999998                 6778


Q ss_pred             eEEeecCCccccccCCCCccccccccCCCcccceeccCCCCCccchHhHHHHHHHHHHh-CccccccccCCCC-Cceeee
Q 018699          206 LCLVDWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQEKKPWKFQVDTYGLCAIVHMMLH-NSYMEIEKKASPD-GGLVYL  283 (351)
Q Consensus       206 ~~l~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~-g~~p~~~~~~~~~-~~~~~~  283 (351)
                      ++|+|||.+...... .........++..|+|||.+.+..++.++||||||+++|+|++ |..||........ ......
T Consensus       139 ~kl~d~g~~~~~~~~-~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~~~~~~~~~~~  217 (256)
T cd05113         139 VKVSDFGLSRYVLDD-EYTSSVGSKFPVRWSPPEVLLYSKFSSKSDVWAFGVLMWEVYSLGKMPYERFNNSETVEKVSQG  217 (256)
T ss_pred             EEECCCccceecCCC-ceeecCCCccChhhCCHHHHhcCcccchhHHHHHHHHHHHHhcCCCCCcCcCCHHHHHHHHhcC
Confidence            999999987643211 1111122234567999999988888999999999999999998 8888864332100 000001


Q ss_pred             cCcchhhhhHHHHHHHHHHHHhcCCCCCChHHHHHHHH
Q 018699          284 PKLSFKRYWKVELWKSLFTNLLNMSSGNDKEVLQNLQK  321 (351)
Q Consensus       284 ~~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~~  321 (351)
                      .....+...+ ..+.+++.+||++||.+||++.+++.+
T Consensus       218 ~~~~~~~~~~-~~~~~li~~cl~~~p~~Rp~~~~ll~~  254 (256)
T cd05113         218 LRLYRPHLAS-EKVYAIMYSCWHEKAEERPTFQQLLSS  254 (256)
T ss_pred             CCCCCCCCCC-HHHHHHHHHHcCCCcccCCCHHHHHHh
Confidence            1111222233 788999999999999999999999864

Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds

>cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1

Probab=100.00  E-value=6e-38  Score=275.23  Aligned_cols=249  Identities=17%  Similarity=0.127  Sum_probs=192.6

Q ss_pred             eEEEEEEeeccCceEEEEEEecCCCCceEEEEecCCCCCh-----HHHHHHHHHhhhccccccccccceeeecccCeeEE
Q 018699           49 KYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFPW-----EFYMYRQLDQRISGRERSSFGFAHRIHLYSDYSIL  123 (351)
Q Consensus        49 ~Y~i~~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~~~-----e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  123 (351)
                      +|+..+.||+|++|.||+|. +..+++.|++|.+......     ....+......+....++++.........+...++
T Consensus         1 ~~~~~~~ig~g~~~~vy~~~-~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~l   79 (258)
T cd06632           1 RWRKGELLGSGSFGSVYEGL-NLDDGDFFAVKEVSLADDGQTGQEAVKQLEQEIALLSKLQHPNIVQYLGTEREEDNLYI   79 (258)
T ss_pred             CccccceeeecCCceEEEEE-EcCCCcEEEEEEEEEccccccchHHHHHHHHHHHHHHhcCCCCchheeeeEecCCeEEE
Confidence            58888999999999999999 4567899999987643211     11112222233445567788888887777889999


Q ss_pred             EEEecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeeccCCCCCccc
Q 018699          124 VCDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSGPWQD  203 (351)
Q Consensus       124 v~e~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~~~~~~~~  203 (351)
                      ++||+++++|.+++..    ...+++..++.++.|++.|+++||+.|++|+||+|+||+++                 .+
T Consensus        80 v~e~~~~~~L~~~~~~----~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~~~ni~~~-----------------~~  138 (258)
T cd06632          80 FLELVPGGSLAKLLKK----YGSFPEPVIRLYTRQILLGLEYLHDRNTVHRDIKGANILVD-----------------TN  138 (258)
T ss_pred             EEEecCCCcHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEC-----------------CC
Confidence            9999999999999976    45788999999999999999999999999999999999998                 67


Q ss_pred             CCeEEeecCCccccccCCCCccccccccCCCcccceeccCCC-CCccchHhHHHHHHHHHHhCccccccccCCCCCce--
Q 018699          204 QGLCLVDWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQEKKP-WKFQVDTYGLCAIVHMMLHNSYMEIEKKASPDGGL--  280 (351)
Q Consensus       204 ~~~~l~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~-~~~~~DiwslG~il~~l~~g~~p~~~~~~~~~~~~--  280 (351)
                      +.++|+|||.+......   .......++..|++||.+.... ++.++|+||+|+++|+|++|..||...........  
T Consensus       139 ~~~kl~d~~~~~~~~~~---~~~~~~~~~~~y~~pe~~~~~~~~~~~~D~~slG~~l~~l~~g~~pf~~~~~~~~~~~~~  215 (258)
T cd06632         139 GVVKLADFGMAKQVVEF---SFAKSFKGSPYWMAPEVIAQQGGYGLAADIWSLGCTVLEMATGKPPWSQLEGVAAVFKIG  215 (258)
T ss_pred             CCEEEccCccceecccc---ccccccCCCcceeCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcccCcHHHHHHHHH
Confidence            78999999987643211   1233456788999999987665 88999999999999999999999865432110000  


Q ss_pred             eeecCcchhhhhHHHHHHHHHHHHhcCCCCCChHHHHHHHHHH
Q 018699          281 VYLPKLSFKRYWKVELWKSLFTNLLNMSSGNDKEVLQNLQKSF  323 (351)
Q Consensus       281 ~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~~~~  323 (351)
                      ........+...+ ..+.+++.+||..+|++||++.+++.|+|
T Consensus       216 ~~~~~~~~~~~~~-~~~~~li~~~l~~~p~~Rp~~~~~l~~~~  257 (258)
T cd06632         216 RSKELPPIPDHLS-DEAKDFILKCLQRDPSLRPTAAELLEHPF  257 (258)
T ss_pred             hcccCCCcCCCcC-HHHHHHHHHHhhcCcccCcCHHHHhcCCC
Confidence            0011222333334 78899999999999999999999999985

Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops

>cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2

Probab=100.00  E-value=1.6e-37  Score=276.20  Aligned_cols=254  Identities=13%  Similarity=0.110  Sum_probs=184.3

Q ss_pred             EcCeeEEEEEEeeccCceEEEEEEecCCCCc----eEEEEecCCCCChH-HHHHHHHHhhhccccccccccceeeecccC
Q 018699           45 IGGKKYQIKGCAGQGGFAKVFKAYVNGDPED----VVALKIQKPAFPWE-FYMYRQLDQRISGRERSSFGFAHRIHLYSD  119 (351)
Q Consensus        45 i~~~~Y~i~~~lg~G~~g~V~~a~~~~~~~~----~vaiK~~~~~~~~e-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  119 (351)
                      +..++|++.+.||.|+||+||+|.+. .+++    .||+|++....... ...+...........++++.....+... .
T Consensus         4 l~~~~~~~~~~lg~G~~g~vy~~~~~-~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~-~   81 (279)
T cd05109           4 LKETELKKVKVLGSGAFGTVYKGIWI-PDGENVKIPVAIKVLRENTSPKANKEILDEAYVMAGVGSPYVCRLLGICLT-S   81 (279)
T ss_pred             cchhheeeeeecCCCCCceEEEEEEe-cCCCccceEEEEEEecCCCCHHHHHHHHHHHHHHHhcCCCCCceEEEEEcC-C
Confidence            45678999999999999999999853 3333    58999987543321 1111111222334456677666665543 4


Q ss_pred             eeEEEEEecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeeccCCCC
Q 018699          120 YSILVCDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSG  199 (351)
Q Consensus       120 ~~~lv~e~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~~~~  199 (351)
                      ..++++||+++|+|.+++...   ...+++..+..++.|++.|++|||++||+|+||+|+||+++               
T Consensus        82 ~~~l~~~~~~~g~l~~~l~~~---~~~~~~~~~~~~~~qi~~~L~~lH~~~iiH~dlkp~Nil~~---------------  143 (279)
T cd05109          82 TVQLVTQLMPYGCLLDYVREN---KDRIGSQDLLNWCVQIAKGMSYLEEVRLVHRDLAARNVLVK---------------  143 (279)
T ss_pred             CcEEEEEcCCCCCHHHHHhhc---cCCCCHHHHHHHHHHHHHHHHHHHHCCeeccccccceEEEc---------------
Confidence            568999999999999998763   35689999999999999999999999999999999999998               


Q ss_pred             CcccCCeEEeecCCccccccCCCCccccccccCCCcccceeccCCCCCccchHhHHHHHHHHHHh-CccccccccCCCCC
Q 018699          200 PWQDQGLCLVDWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQEKKPWKFQVDTYGLCAIVHMMLH-NSYMEIEKKASPDG  278 (351)
Q Consensus       200 ~~~~~~~~l~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~-g~~p~~~~~~~~~~  278 (351)
                        .++.++|+|||++................++..|+|||...+..++.++|||||||++|+|++ |..||.........
T Consensus       144 --~~~~~kL~dfG~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~  221 (279)
T cd05109         144 --SPNHVKITDFGLARLLDIDETEYHADGGKVPIKWMALESILHRRFTHQSDVWSYGVTVWELMTFGAKPYDGIPAREIP  221 (279)
T ss_pred             --CCCcEEECCCCceeecccccceeecCCCccchhhCCHHHhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCHHHHH
Confidence              566799999998865432211111222334678999999988889999999999999999998 88888643321000


Q ss_pred             ce-eeecCcchhhhhHHHHHHHHHHHHhcCCCCCChHHHHHHHH
Q 018699          279 GL-VYLPKLSFKRYWKVELWKSLFTNLLNMSSGNDKEVLQNLQK  321 (351)
Q Consensus       279 ~~-~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~~  321 (351)
                      .. ......+.+...+ ..+.++|.+||+.||+.||++.+++..
T Consensus       222 ~~~~~~~~~~~~~~~~-~~~~~li~~~l~~dp~~Rp~~~~l~~~  264 (279)
T cd05109         222 DLLEKGERLPQPPICT-IDVYMIMVKCWMIDSECRPRFRELVDE  264 (279)
T ss_pred             HHHHCCCcCCCCccCC-HHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence            00 0001111222233 788999999999999999999999854

Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve

>cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1

Probab=100.00  E-value=1.8e-37  Score=276.43  Aligned_cols=257  Identities=12%  Similarity=0.057  Sum_probs=190.6

Q ss_pred             CeeEEEEEEeeccCceEEEEEEe---cCCCCceEEEEecCCCCChHH-HHHHHHHhhhccccccccccceeeecccCeeE
Q 018699           47 GKKYQIKGCAGQGGFAKVFKAYV---NGDPEDVVALKIQKPAFPWEF-YMYRQLDQRISGRERSSFGFAHRIHLYSDYSI  122 (351)
Q Consensus        47 ~~~Y~i~~~lg~G~~g~V~~a~~---~~~~~~~vaiK~~~~~~~~e~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  122 (351)
                      -..|++.+.||+|+||+||+|.+   +...++.|++|.+......+. ..+...........+++++........+...|
T Consensus         4 ~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~   83 (283)
T cd05090           4 LSAVRFMEELGECAFGKIYKGHLYLPGMDHAQLVAIKTLKDINNPQQWGEFQQEASLMAELHHPNIVCLLGVVTQEQPVC   83 (283)
T ss_pred             hhhceeeeeccccCCcceEEEEEecCCCCCcceEEEEeccCCCCHHHHHHHHHHHHHHhhCCCCCeeeEEEEEecCCceE
Confidence            35799999999999999999985   234568899999875433222 22222223444556788888888877788899


Q ss_pred             EEEEecCCCCHHHHHHHHHh-------------hCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCc
Q 018699          123 LVCDYLSQGTLQDAINSYVV-------------IGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDE  189 (351)
Q Consensus       123 lv~e~~~~~sL~~~l~~~~~-------------~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~  189 (351)
                      +||||+++++|.+++.....             ....+++..+..++.|++.|+.|||++|++|+||+|+||+++     
T Consensus        84 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~i~H~dlkp~nili~-----  158 (283)
T cd05090          84 MLFEYLNQGDLHEFLIMRSPHSDVGCSSDEDGTVKSSLDHGDFLHIAIQIAAGMEYLSSHFFVHKDLAARNILIG-----  158 (283)
T ss_pred             EEEEcCCCCcHHHHHHhcCCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHhcCeehhccccceEEEc-----
Confidence            99999999999999864210             013478888999999999999999999999999999999999     


Q ss_pred             ceeeccCCCCCcccCCeEEeecCCccccccCCCCccccccccCCCcccceeccCCCCCccchHhHHHHHHHHHHh-Cccc
Q 018699          190 LTVLDHDRSGPWQDQGLCLVDWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQEKKPWKFQVDTYGLCAIVHMMLH-NSYM  268 (351)
Q Consensus       190 ~~~~~~~~~~~~~~~~~~l~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~-g~~p  268 (351)
                                  .++.++|+|||++................++..|+|||.+.+..++.++|+|||||++|+|++ |..|
T Consensus       159 ------------~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~~g~~p  226 (283)
T cd05090         159 ------------EQLHVKISDLGLSREIYSADYYRVQPKSLLPIRWMPPEAIMYGKFSSDSDIWSFGVVLWEIFSFGLQP  226 (283)
T ss_pred             ------------CCCcEEeccccccccccCCcceecccCCCccceecChHHhccCCCCchhhhHHHHHHHHHHHcCCCCC
Confidence                        667799999999865432111112233345677999999988888999999999999999998 8888


Q ss_pred             cccccCCCC-CceeeecCcchhhhhHHHHHHHHHHHHhcCCCCCChHHHHHHHH
Q 018699          269 EIEKKASPD-GGLVYLPKLSFKRYWKVELWKSLFTNLLNMSSGNDKEVLQNLQK  321 (351)
Q Consensus       269 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~~  321 (351)
                      |........ .........+.+...+ ..+.+++.+||+.||.+||++.+++++
T Consensus       227 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~li~~cl~~~p~~Rp~~~~i~~~  279 (283)
T cd05090         227 YYGFSNQEVIEMVRKRQLLPCSEDCP-PRMYSLMTECWQEGPSRRPRFKDIHTR  279 (283)
T ss_pred             CCCCCHHHHHHHHHcCCcCCCCCCCC-HHHHHHHHHHcccCcccCcCHHHHHHH
Confidence            865332100 0000111122233333 788999999999999999999998765

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly

>cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase

Probab=100.00  E-value=1.7e-37  Score=273.71  Aligned_cols=256  Identities=20%  Similarity=0.168  Sum_probs=194.6

Q ss_pred             eeEEEEEEeeccCceEEEEEEecCCCCceEEEEecCCCCCh-HHHHHHHHHhhhccccccccccceeeecccCeeEEEEE
Q 018699           48 KKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFPW-EFYMYRQLDQRISGRERSSFGFAHRIHLYSDYSILVCD  126 (351)
Q Consensus        48 ~~Y~i~~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~~~-e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e  126 (351)
                      ++|++.+.||.|++|+||+|. ...++..+++|++...... ....+......+....++++.........++..++|+|
T Consensus         1 ~~y~~~~~lg~g~~~~v~~~~-~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~e   79 (267)
T cd06610           1 DDYELIEVIGVGATAVVYAAI-CLPNNEKVAIKRIDLEKCQTSVDELRKEVQAMSQCNHPNVVKYYTSFVVGDELWLVMP   79 (267)
T ss_pred             CcceeeeeecCCCCeEEEEEE-EcCCCcEEEEEEeccCCcchHHHHHHHHHHHHHhcCCCCEEEEEEEEeeCCEEEEEEe
Confidence            479999999999999999999 4567899999998754322 22222222233445567788877777777889999999


Q ss_pred             ecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeeccCCCCCcccCCe
Q 018699          127 YLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSGPWQDQGL  206 (351)
Q Consensus       127 ~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~~~~~~~~~~~  206 (351)
                      ++++++|.+++..... ...+++..++.++.|++.|+++||++|++|+||+|+||+++                 .++.+
T Consensus        80 ~~~~~~l~~~~~~~~~-~~~~~~~~~~~~~~ql~~al~~lh~~~i~h~~l~p~ni~~~-----------------~~~~~  141 (267)
T cd06610          80 YLSGGSLLDIMKSSYP-RGGLDEAIIATVLKEVLKGLEYLHSNGQIHRDIKAGNILLG-----------------EDGSV  141 (267)
T ss_pred             ccCCCcHHHHHHHhcc-cCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHhEEEc-----------------CCCCE
Confidence            9999999999976421 24689999999999999999999999999999999999999                 66779


Q ss_pred             EEeecCCccccccCCCCc--cccccccCCCcccceeccCC-CCCccchHhHHHHHHHHHHhCccccccccCCCCC-ceee
Q 018699          207 CLVDWGRGIDLHLFPDNM--EFEGDCRTSGFRCIEMQEKK-PWKFQVDTYGLCAIVHMMLHNSYMEIEKKASPDG-GLVY  282 (351)
Q Consensus       207 ~l~Dfg~a~~~~~~~~~~--~~~~~~g~~~y~aPE~~~~~-~~~~~~DiwslG~il~~l~~g~~p~~~~~~~~~~-~~~~  282 (351)
                      +|+|||++..........  ......++..|+|||.+... .++.++|+|||||++|+|++|..||......... ....
T Consensus       142 ~l~df~~~~~~~~~~~~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~~~~~~~~~~  221 (267)
T cd06610         142 KIADFGVSASLADGGDRTRKVRKTFVGTPCWMAPEVMEQVHGYDFKADIWSFGITAIELATGAAPYSKYPPMKVLMLTLQ  221 (267)
T ss_pred             EEcccchHHHhccCccccccccccccCChhhcChHHHccccCcCcccchHhHhHHHHHHHhCCCCccccChhhhHHHHhc
Confidence            999999886543222111  12334578899999998766 7789999999999999999999999754432100 0000


Q ss_pred             ecCcchh-----hhhHHHHHHHHHHHHhcCCCCCChHHHHHHHHHH
Q 018699          283 LPKLSFK-----RYWKVELWKSLFTNLLNMSSGNDKEVLQNLQKSF  323 (351)
Q Consensus       283 ~~~~~~~-----~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~~~~  323 (351)
                      ......+     ...+ ..+.+++.+||..||++||++.+++.|||
T Consensus       222 ~~~~~~~~~~~~~~~~-~~~~~li~~~l~~~p~~Rp~~~~ll~~p~  266 (267)
T cd06610         222 NDPPSLETGADYKKYS-KSFRKMISLCLQKDPSKRPTAEELLKHKF  266 (267)
T ss_pred             CCCCCcCCcccccccc-HHHHHHHHHHcCCChhhCcCHHHHhhCCC
Confidence            1111111     1222 67899999999999999999999999986

Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1

>cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4

Probab=100.00  E-value=1.6e-37  Score=273.60  Aligned_cols=252  Identities=20%  Similarity=0.206  Sum_probs=194.3

Q ss_pred             eEEEEEEeeccCceEEEEEEecCCCCceEEEEecCCCCCh--HHHHHHHHHhhhccccccccccceeeecccCeeEEEEE
Q 018699           49 KYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFPW--EFYMYRQLDQRISGRERSSFGFAHRIHLYSDYSILVCD  126 (351)
Q Consensus        49 ~Y~i~~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~~~--e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e  126 (351)
                      +|++.+.||+|++|.||+|. +..+++.|++|.+......  ....+...........++++..........+..++|+|
T Consensus         1 ~y~~~~~lg~G~~~~v~~~~-~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~lv~e   79 (264)
T cd06626           1 RWQRGNKIGGGTFGKVYTAV-NLDTGELMAVKEIRIQDNDPKTIKEIADEMKVLELLKHPNLVKYYGVEVHREKVYIFME   79 (264)
T ss_pred             CceeeeEeecCCCcEEEEEE-ECCCCcEEEEEEEECcccchHHHHHHHHHHHHHHhCCCCChhheeeeEecCCEEEEEEe
Confidence            69999999999999999999 4667899999998765443  22222222233445567777777777777889999999


Q ss_pred             ecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeeccCCCCCcccCCe
Q 018699          127 YLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSGPWQDQGL  206 (351)
Q Consensus       127 ~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~~~~~~~~~~~  206 (351)
                      |+++++|.+++..    +..+++..+..++.|++.|+.|||+.|++|+||+|+||+++                 .++.+
T Consensus        80 ~~~~~~L~~~~~~----~~~~~~~~~~~i~~~i~~~l~~lh~~~i~H~dl~~~nil~~-----------------~~~~~  138 (264)
T cd06626          80 YCSGGTLEELLEH----GRILDEHVIRVYTLQLLEGLAYLHSHGIVHRDIKPANIFLD-----------------HNGVI  138 (264)
T ss_pred             cCCCCcHHHHHhh----cCCCChHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEC-----------------CCCCE
Confidence            9999999999987    45688999999999999999999999999999999999999                 67789


Q ss_pred             EEeecCCccccccCCCCc-c-ccccccCCCcccceeccCCC---CCccchHhHHHHHHHHHHhCccccccccCCCCCc--
Q 018699          207 CLVDWGRGIDLHLFPDNM-E-FEGDCRTSGFRCIEMQEKKP---WKFQVDTYGLCAIVHMMLHNSYMEIEKKASPDGG--  279 (351)
Q Consensus       207 ~l~Dfg~a~~~~~~~~~~-~-~~~~~g~~~y~aPE~~~~~~---~~~~~DiwslG~il~~l~~g~~p~~~~~~~~~~~--  279 (351)
                      +|+|||.+.......... . .....++..|+|||.+.+..   ++.++||||+|+++|++++|..||..........  
T Consensus       139 kl~d~g~~~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~~~~Dv~s~G~il~~l~~g~~pf~~~~~~~~~~~~  218 (264)
T cd06626         139 KLGDFGCAVKLKNNTTTMGEEVQSLAGTPAYMAPEVITGGKGKGHGRAADIWSLGCVVLEMATGKRPWSELDNEFQIMFH  218 (264)
T ss_pred             EEcccccccccCCCCCcccccccCCcCCcCccChhhccCCCCCCCCcccchHHHHHHHHHHHhCCCCccCCcchHHHHHH
Confidence            999999886543221111 1 22346788999999987765   7899999999999999999999996442210000  


Q ss_pred             eeeecCcchhhhh--HHHHHHHHHHHHhcCCCCCChHHHHHHHHHH
Q 018699          280 LVYLPKLSFKRYW--KVELWKSLFTNLLNMSSGNDKEVLQNLQKSF  323 (351)
Q Consensus       280 ~~~~~~~~~~~~~--~~~~~~~li~~~L~~dP~~R~s~~e~l~~~~  323 (351)
                      ........++...  + ..+.++|.+||+.+|++||++.+++.|+|
T Consensus       219 ~~~~~~~~~~~~~~~~-~~~~~li~~~l~~~p~~R~~~~~i~~~~~  263 (264)
T cd06626         219 VGAGHKPPIPDSLQLS-PEGKDFLDRCLESDPKKRPTASELLQHPF  263 (264)
T ss_pred             HhcCCCCCCCcccccC-HHHHHHHHHHccCCcccCCCHHHHhcCCC
Confidence            0011122222221  3 77899999999999999999999999986

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4

>cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1

Probab=100.00  E-value=4.3e-38  Score=279.51  Aligned_cols=253  Identities=21%  Similarity=0.237  Sum_probs=196.3

Q ss_pred             eeEEEEEEeeccCceEEEEEEecCCCCceEEEEecCCCCChH---HHHHHHHHhhhcccc-ccccccceeeecccCeeEE
Q 018699           48 KKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFPWE---FYMYRQLDQRISGRE-RSSFGFAHRIHLYSDYSIL  123 (351)
Q Consensus        48 ~~Y~i~~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~~~e---~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~l  123 (351)
                      ++|++.+.||+|++|.||+|. +..+++.||+|++.+.....   ............... ++++.....+....+..++
T Consensus         1 ~~y~~~~~lg~g~~~~vy~~~-~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~l   79 (280)
T cd05581           1 DDFKFGKIIGEGSFSTVVLAK-EKETNKEYAIKILDKRQLIKEKKVKYVKIEKEVLTRLNGHPGIIKLYYTFQDEENLYF   79 (280)
T ss_pred             CCceEeeeecCCCceEEEEEE-EcCCCCEEEEEEechHhccchHHHHHHHHHHHHHHhcccCCCchhHHHHhcCCceEEE
Confidence            479999999999999999999 56788999999987632211   111111122223333 7788877777777889999


Q ss_pred             EEEecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeeccCCCCCccc
Q 018699          124 VCDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSGPWQD  203 (351)
Q Consensus       124 v~e~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~~~~~~~~  203 (351)
                      |||++++++|.+++.+    ...+++..++.++.|++.|+.+||+.|++|+||+|+||+++                 .+
T Consensus        80 v~e~~~~~~L~~~l~~----~~~l~~~~~~~i~~ql~~~l~~Lh~~~~~H~dl~~~ni~i~-----------------~~  138 (280)
T cd05581          80 VLEYAPNGELLQYIRK----YGSLDEKCTRFYAAEILLALEYLHSKGIIHRDLKPENILLD-----------------KD  138 (280)
T ss_pred             EEcCCCCCcHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHeEEC-----------------CC
Confidence            9999999999999987    45799999999999999999999999999999999999998                 67


Q ss_pred             CCeEEeecCCccccccCCCC------------------ccccccccCCCcccceeccCCCCCccchHhHHHHHHHHHHhC
Q 018699          204 QGLCLVDWGRGIDLHLFPDN------------------MEFEGDCRTSGFRCIEMQEKKPWKFQVDTYGLCAIVHMMLHN  265 (351)
Q Consensus       204 ~~~~l~Dfg~a~~~~~~~~~------------------~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g  265 (351)
                      +.++|+|||++.........                  .......++..|+|||...+..++.++|+||||++++++++|
T Consensus       139 ~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~~l~~g  218 (280)
T cd05581         139 MHIKITDFGTAKVLDPNSSPESNKGDATNIDSQIEKNRRRFASFVGTAEYVSPELLNEKPAGKSSDLWALGCIIYQMLTG  218 (280)
T ss_pred             CCEEecCCccccccCCccccccCCCCCccccccccccccccccccCCccccCHHHhCCCCCChhhhHHHHHHHHHHHHhC
Confidence            78999999988654322110                  122334578889999999888889999999999999999999


Q ss_pred             ccccccccCCCCCceeeecCcchhhhhHHHHHHHHHHHHhcCCCCCChHH----HHHHHHHH
Q 018699          266 SYMEIEKKASPDGGLVYLPKLSFKRYWKVELWKSLFTNLLNMSSGNDKEV----LQNLQKSF  323 (351)
Q Consensus       266 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~----~e~l~~~~  323 (351)
                      ..||...................+..++ +.+.+||.+||+.||++||++    .+++.|+|
T Consensus       219 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~li~~~l~~~p~~R~~~~~~~~~ll~~~~  279 (280)
T cd05581         219 KPPFRGSNEYLTFQKILKLEYSFPPNFP-PDAKDLIEKLLVLDPQDRLGVNEGYDELKAHPF  279 (280)
T ss_pred             CCCCCCccHHHHHHHHHhcCCCCCCccC-HHHHHHHHHHhcCCHhhCCCcccCHHHHhcCCC
Confidence            9998755422111111122223334444 789999999999999999999    99999986

Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto

>cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase

Probab=100.00  E-value=1.7e-37  Score=278.15  Aligned_cols=255  Identities=18%  Similarity=0.192  Sum_probs=183.4

Q ss_pred             eeEEEEEEeeccCceEEEEEEecCCCCceEEEEecCCCCChH---HHHHHHHHhhhccccccccccceeeecccCe----
Q 018699           48 KKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFPWE---FYMYRQLDQRISGRERSSFGFAHRIHLYSDY----  120 (351)
Q Consensus        48 ~~Y~i~~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~~~e---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----  120 (351)
                      ++|++.+.||+|++|.||+|. +..+++.||+|........+   .....++........+++++....+....+.    
T Consensus         1 ~~y~~~~~lg~g~~g~vy~~~-~~~~~~~v~lK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~   79 (295)
T cd07837           1 DAYEKLEKIGEGTYGKVYKAR-DKNTGKLVALKKTRLEMDEEGIPPTALREISLLQMLSESIYIVRLLDVEHVEEKNGKP   79 (295)
T ss_pred             CCceEeeEecccCCeEEEEEE-ECCCCcEEEEEeehhhccccCCchHHHHHHHHHHHccCCCCccceeeeEeecCCCCCc
Confidence            479999999999999999999 56778999999876543211   1222222221122234667666666554443    


Q ss_pred             -eEEEEEecCCCCHHHHHHHHHhh-CCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeeccCCC
Q 018699          121 -SILVCDYLSQGTLQDAINSYVVI-GKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRS  198 (351)
Q Consensus       121 -~~lv~e~~~~~sL~~~l~~~~~~-~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~~~  198 (351)
                       .|+||||+++ +|.+++...... +..+++..++.++.||+.||.|||++|++|+||+|+||+++.             
T Consensus        80 ~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~i~H~dl~~~nil~~~-------------  145 (295)
T cd07837          80 SLYLVFEYLDS-DLKKFMDSNGRGPGRPLPAKTIKSFMYQLLKGVAHCHKHGVMHRDLKPQNLLVDK-------------  145 (295)
T ss_pred             eEEEEeeccCc-CHHHHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCChHHEEEec-------------
Confidence             7999999965 898888764321 346899999999999999999999999999999999999992             


Q ss_pred             CCcccCCeEEeecCCccccccCCCCccccccccCCCcccceeccC-CCCCccchHhHHHHHHHHHHhCccccccccCCCC
Q 018699          199 GPWQDQGLCLVDWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQEK-KPWKFQVDTYGLCAIVHMMLHNSYMEIEKKASPD  277 (351)
Q Consensus       199 ~~~~~~~~~l~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~~DiwslG~il~~l~~g~~p~~~~~~~~~  277 (351)
                         .++.++|+|||.+......  ........+++.|+|||.+.+ ..++.++||||+|+++|+|++|..||...+....
T Consensus       146 ---~~~~~kl~dfg~~~~~~~~--~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~~~~  220 (295)
T cd07837         146 ---QKGLLKIADLGLGRAFSIP--VKSYTHEIVTLWYRAPEVLLGSTHYSTPVDIWSVGCIFAEMSRKQPLFPGDSELQQ  220 (295)
T ss_pred             ---CCCeEEEeecccceecCCC--ccccCCcccccCCCChHHhhCCCCCCchHHHHHHHHHHHHHHcCCCCCCCCCHHHH
Confidence               1677999999988643211  112223356788999998855 5578999999999999999999999864322100


Q ss_pred             -------------Cc------------eeeecCcchh---hhhHHHHHHHHHHHHhcCCCCCChHHHHHHHHHH
Q 018699          278 -------------GG------------LVYLPKLSFK---RYWKVELWKSLFTNLLNMSSGNDKEVLQNLQKSF  323 (351)
Q Consensus       278 -------------~~------------~~~~~~~~~~---~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~~~~  323 (351)
                                   ..            +.........   ...+ ..+.+||.+||.+||.+||++.+++.|+|
T Consensus       221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~i~~~l~~~P~~R~~~~eil~~~~  293 (295)
T cd07837         221 LLHIFKLLGTPTEQVWPGVSKLRDWHEFPQWKPQDLSRAVPDLS-PEGLDLLQKMLRYDPAKRISAKAALTHPY  293 (295)
T ss_pred             HHHHHHHhCCCChhhCcchhhccchhhcCcccchhHHHhccccC-HHHHHHHHHHccCChhhcCCHHHHhcCCC
Confidence                         00            0000000000   1123 77899999999999999999999999986

Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm

>cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9

Probab=100.00  E-value=1.6e-37  Score=272.46  Aligned_cols=252  Identities=17%  Similarity=0.127  Sum_probs=194.6

Q ss_pred             eEEEEEEeeccCceEEEEEEecCCCCceEEEEecCCCCChH--HHHHHHHHhhhccccccccccceeeecccCeeEEEEE
Q 018699           49 KYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFPWE--FYMYRQLDQRISGRERSSFGFAHRIHLYSDYSILVCD  126 (351)
Q Consensus        49 ~Y~i~~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~~~e--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e  126 (351)
                      +|++.+.||.|+||.||.++ +..+++.+++|.+......+  ...............++++..........+..+++||
T Consensus         1 ~y~~~~~ig~g~~g~v~~~~-~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~~~e   79 (256)
T cd08221           1 HYIPIRVLGKGAFGEATLYR-RTEDDSLVVWKEVNLTRLSEKERRDALNEIVILSLLQHPNIIAYYNHFMDDNTLLIEME   79 (256)
T ss_pred             CceEeeEecccCCceEEEEE-EcCCCcEEEEEEEeecccchhHHHHHHHHHHHHHhCCCCCeeEEEeEEecCCeEEEEEE
Confidence            59999999999999999999 56778999999876543222  1111112223444567788888888888899999999


Q ss_pred             ecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeeccCCCCCcccCCe
Q 018699          127 YLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSGPWQDQGL  206 (351)
Q Consensus       127 ~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~~~~~~~~~~~  206 (351)
                      |+++++|.+++....  +..+++..+..++.|++.|+.|||+.|++|+||+|+||+++                 .++.+
T Consensus        80 ~~~~~~L~~~~~~~~--~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~dl~p~ni~~~-----------------~~~~~  140 (256)
T cd08221          80 YANGGTLYDKIVRQK--GQLFEEEMVLWYLFQIVSAVSYIHKAGILHRDIKTLNIFLT-----------------KAGLI  140 (256)
T ss_pred             ecCCCcHHHHHHhcc--ccCCCHHHHHHHHHHHHHHHHHHHhCCccccCCChHhEEEe-----------------CCCCE
Confidence            999999999987642  35689999999999999999999999999999999999999                 66779


Q ss_pred             EEeecCCccccccCCCCccccccccCCCcccceeccCCCCCccchHhHHHHHHHHHHhCccccccccCCCCCce-eeecC
Q 018699          207 CLVDWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQEKKPWKFQVDTYGLCAIVHMMLHNSYMEIEKKASPDGGL-VYLPK  285 (351)
Q Consensus       207 ~l~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~p~~~~~~~~~~~~-~~~~~  285 (351)
                      +|+|||.+......  ........+++.|+|||.+.+..++.++|+||||+++|+|++|..||........... .....
T Consensus       141 kl~d~~~~~~~~~~--~~~~~~~~~~~~y~ape~~~~~~~~~~~Dv~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~~  218 (256)
T cd08221         141 KLGDFGISKILGSE--YSMAETVVGTPYYMSPELCQGVKYNFKSDIWALGCVLYELLTLKRTFDATNPLNLVVKIVQGNY  218 (256)
T ss_pred             EECcCcceEEcccc--cccccccCCCccccCHhhcCCCCCCCcchhHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHcCCC
Confidence            99999988643221  1122345688999999999888889999999999999999999999865433211000 00111


Q ss_pred             cchhhhhHHHHHHHHHHHHhcCCCCCChHHHHHHHHHH
Q 018699          286 LSFKRYWKVELWKSLFTNLLNMSSGNDKEVLQNLQKSF  323 (351)
Q Consensus       286 ~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~~~~  323 (351)
                      .+.+...+ ..+.++|.+||.++|++||++.+++.++|
T Consensus       219 ~~~~~~~~-~~~~~~i~~~l~~~p~~R~s~~~ll~~~~  255 (256)
T cd08221         219 TPVVSVYS-SELISLVHSLLQQDPEKRPTADEVLDQPL  255 (256)
T ss_pred             CCCccccC-HHHHHHHHHHcccCcccCCCHHHHhhCcC
Confidence            11122233 77899999999999999999999999875

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa

>cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3

Probab=100.00  E-value=1.6e-37  Score=274.28  Aligned_cols=252  Identities=17%  Similarity=0.139  Sum_probs=190.0

Q ss_pred             eEEEEEEeeccCceEEEEEEecCCCCceEEEEecCCCCCh-----HHHHHHHHHhhhccccccccccceeeecc--cCee
Q 018699           49 KYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFPW-----EFYMYRQLDQRISGRERSSFGFAHRIHLY--SDYS  121 (351)
Q Consensus        49 ~Y~i~~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~~~-----e~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~  121 (351)
                      .|++.+.||+|++|.||+|. +..+++.|++|.+......     ....+......+....|+++.....+...  +...
T Consensus         3 ~~~~~~~lg~g~~g~vy~~~-~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~   81 (266)
T cd06651           3 NWRRGKLLGQGAFGRVYLCY-DVDTGRELAAKQVQFDPESPETSKEVSALECEIQLLKNLQHERIVQYYGCLRDRAEKTL   81 (266)
T ss_pred             CccccceecCCCCEEEEEEE-EcCCCcEEEEEEeecCcCCchhHHHHHHHHHHHHHHHHcCCCCeeeEEEEEEcCCCCEE
Confidence            68999999999999999999 5677899999987643221     11122222233444567777776665543  4678


Q ss_pred             EEEEEecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeeccCCCCCc
Q 018699          122 ILVCDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSGPW  201 (351)
Q Consensus       122 ~lv~e~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~~~~~~  201 (351)
                      ++++||+++++|.+++..    +..+++..++.++.|++.|+++||+.+|+|+||+|+||+++                 
T Consensus        82 ~l~~e~~~~~~L~~~l~~----~~~l~~~~~~~~~~qi~~~l~~LH~~~i~H~~l~p~nil~~-----------------  140 (266)
T cd06651          82 TIFMEYMPGGSVKDQLKA----YGALTESVTRKYTRQILEGMSYLHSNMIVHRDIKGANILRD-----------------  140 (266)
T ss_pred             EEEEeCCCCCcHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEEC-----------------
Confidence            999999999999999976    45788999999999999999999999999999999999998                 


Q ss_pred             ccCCeEEeecCCccccccCC-CCccccccccCCCcccceeccCCCCCccchHhHHHHHHHHHHhCccccccccCCCCCc-
Q 018699          202 QDQGLCLVDWGRGIDLHLFP-DNMEFEGDCRTSGFRCIEMQEKKPWKFQVDTYGLCAIVHMMLHNSYMEIEKKASPDGG-  279 (351)
Q Consensus       202 ~~~~~~l~Dfg~a~~~~~~~-~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~p~~~~~~~~~~~-  279 (351)
                      .++.++|+|||++....... .........++..|+|||.+.+..++.++|+||+||++|+|++|..||.......... 
T Consensus       141 ~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i~~el~~g~~pf~~~~~~~~~~~  220 (266)
T cd06651         141 SAGNVKLGDFGASKRLQTICMSGTGIRSVTGTPYWMSPEVISGEGYGRKADVWSLGCTVVEMLTEKPPWAEYEAMAAIFK  220 (266)
T ss_pred             CCCCEEEccCCCccccccccccCCccccCCccccccCHHHhCCCCCCchhhhHHHHHHHHHHHHCCCCccccchHHHHHH
Confidence            66779999999886432211 1112223457889999999988888999999999999999999999997543221100 


Q ss_pred             -eeeecCcchhhhhHHHHHHHHHHHHhcCCCCCChHHHHHHHHHHH
Q 018699          280 -LVYLPKLSFKRYWKVELWKSLFTNLLNMSSGNDKEVLQNLQKSFQ  324 (351)
Q Consensus       280 -~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~~~~~  324 (351)
                       ........++...+ +.++++| +||..+|++||++.|+++|||.
T Consensus       221 ~~~~~~~~~~~~~~~-~~~~~li-~~~~~~p~~Rp~~~eil~hp~~  264 (266)
T cd06651         221 IATQPTNPQLPSHIS-EHARDFL-GCIFVEARHRPSAEELLRHPFA  264 (266)
T ss_pred             HhcCCCCCCCchhcC-HHHHHHH-HHhcCChhhCcCHHHHhcCccc
Confidence             01112233343344 7788999 6777899999999999999974

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development

>cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase

Probab=100.00  E-value=1.3e-37  Score=276.51  Aligned_cols=262  Identities=11%  Similarity=0.052  Sum_probs=190.2

Q ss_pred             EcCeeEEEEEEeeccCceEEEEEEecCC----CCceEEEEecCCCCChH--HHHHHHHHhhhccccccccccceeeeccc
Q 018699           45 IGGKKYQIKGCAGQGGFAKVFKAYVNGD----PEDVVALKIQKPAFPWE--FYMYRQLDQRISGRERSSFGFAHRIHLYS  118 (351)
Q Consensus        45 i~~~~Y~i~~~lg~G~~g~V~~a~~~~~----~~~~vaiK~~~~~~~~e--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  118 (351)
                      +.+++|++.+.||+|++|.||+|.+...    .+..|++|.+.......  .....+ ........++++..........
T Consensus         3 ~~~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~e-~~~l~~l~~~~i~~~~~~~~~~   81 (277)
T cd05036           3 VPRDSITLLRALGHGAFGEVYEGLYRGRDGDAVELQVAVKTLPESCSEQDESDFLME-ALIMSKFNHQNIVRLIGVSFER   81 (277)
T ss_pred             CCHHHcEeeeECCCCCCCcEEEEEEecCCCCCCceeEEEEEcCCCCCHHHHHHHHHH-HHHHHhCCCCCEeeEEEEEccC
Confidence            4567899999999999999999996321    56889999876543221  122222 2233445677788877777777


Q ss_pred             CeeEEEEEecCCCCHHHHHHHHHhh---CCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeecc
Q 018699          119 DYSILVCDYLSQGTLQDAINSYVVI---GKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDH  195 (351)
Q Consensus       119 ~~~~lv~e~~~~~sL~~~l~~~~~~---~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~  195 (351)
                      +..++||||+++++|.+++......   ...+++..+..++.||+.|+.|||+++++|+||+|+||+++...        
T Consensus        82 ~~~~lv~e~~~g~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~nil~~~~~--------  153 (277)
T cd05036          82 LPRFILLELMAGGDLKSFLRENRPRPERPSSLTMKDLLFCARDVAKGCKYLEENHFIHRDIAARNCLLTCKG--------  153 (277)
T ss_pred             CCcEEEEecCCCCCHHHHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccchheEEEeccC--------
Confidence            8889999999999999999764210   12588899999999999999999999999999999999998432        


Q ss_pred             CCCCCcccCCeEEeecCCccccccCCCCccccccccCCCcccceeccCCCCCccchHhHHHHHHHHHHh-CccccccccC
Q 018699          196 DRSGPWQDQGLCLVDWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQEKKPWKFQVDTYGLCAIVHMMLH-NSYMEIEKKA  274 (351)
Q Consensus       196 ~~~~~~~~~~~~l~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~-g~~p~~~~~~  274 (351)
                            ....++|+|||++.................+..|+|||.+.+..++.++|||||||++|+|++ |..||.....
T Consensus       154 ------~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~~g~~pf~~~~~  227 (277)
T cd05036         154 ------PGRVAKIADFGMARDIYRASYYRKGGRAMLPIKWMPPEAFLDGIFTSKTDVWSFGVLLWEIFSLGYMPYPGRTN  227 (277)
T ss_pred             ------CCcceEeccCccccccCCccceecCCCCCccHhhCCHHHHhcCCcCchhHHHHHHHHHHHHHcCCCCCCCCCCH
Confidence                  234589999998865421111111112223467999999988889999999999999999996 8889865432


Q ss_pred             CCCCcee-eecCcchhhhhHHHHHHHHHHHHhcCCCCCChHHHHHHHHH
Q 018699          275 SPDGGLV-YLPKLSFKRYWKVELWKSLFTNLLNMSSGNDKEVLQNLQKS  322 (351)
Q Consensus       275 ~~~~~~~-~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~~~  322 (351)
                      ....... .......+...+ ..+.+++.+||+.+|++||++.+++.|.
T Consensus       228 ~~~~~~~~~~~~~~~~~~~~-~~~~~~i~~cl~~~p~~Rps~~~vl~~l  275 (277)
T cd05036         228 QEVMEFVTGGGRLDPPKGCP-GPVYRIMTDCWQHTPEDRPNFATILERI  275 (277)
T ss_pred             HHHHHHHHcCCcCCCCCCCC-HHHHHHHHHHcCCCcccCcCHHHHHHHh
Confidence            2100000 011112223333 6789999999999999999999999873

Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well

>cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1

Probab=100.00  E-value=1.5e-37  Score=280.17  Aligned_cols=263  Identities=12%  Similarity=0.087  Sum_probs=191.8

Q ss_pred             eEEEEcCeeEEEEEEeeccCceEEEEEEecC------CCCceEEEEecCCCCChH--HHHHHHHHhhhccc-cccccccc
Q 018699           41 KTIEIGGKKYQIKGCAGQGGFAKVFKAYVNG------DPEDVVALKIQKPAFPWE--FYMYRQLDQRISGR-ERSSFGFA  111 (351)
Q Consensus        41 ~~~~i~~~~Y~i~~~lg~G~~g~V~~a~~~~------~~~~~vaiK~~~~~~~~e--~~~~~~~~~~~~~~-~~~~~~~~  111 (351)
                      +++++..++|.+.+.||+|+||.||+|++..      .....+|+|.+......+  .....++. .+... .|+++...
T Consensus        11 ~~~~~~~~~~~i~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~-~l~~l~~h~~i~~~   89 (307)
T cd05098          11 PRWEVPRDRLVLGKPLGEGCFGQVVMAEAIGLDKEKPNRVTKVAVKMLKSDATEKDLSDLISEME-MMKMIGKHKNIINL   89 (307)
T ss_pred             CcceeehHHeEEeeeeccCCCeeEEEeEEeccCCcccCccceEEEEeccCCCChHHHHHHHHHHH-HHHHhcCCCCEeeE
Confidence            4567778899999999999999999998522      123579999988653221  12222222 22222 57788888


Q ss_pred             eeeecccCeeEEEEEecCCCCHHHHHHHHHhh------------CCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCC
Q 018699          112 HRIHLYSDYSILVCDYLSQGTLQDAINSYVVI------------GKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPD  179 (351)
Q Consensus       112 ~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~~------------~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~  179 (351)
                      .......+..|+||||+++++|.+++......            ...++..+++.++.|++.||+|||++|++|+||+|+
T Consensus        90 ~~~~~~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~gi~H~dlkp~  169 (307)
T cd05098          90 LGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYCYNPTQVPEEQLSFKDLVSCAYQVARGMEYLASKKCIHRDLAAR  169 (307)
T ss_pred             EEEEecCCceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHCCcccccccHH
Confidence            88777788999999999999999999864210            124788899999999999999999999999999999


Q ss_pred             cEEEeecCCcceeeccCCCCCcccCCeEEeecCCccccccCCCCccccccccCCCcccceeccCCCCCccchHhHHHHHH
Q 018699          180 NLLIRYARDELTVLDHDRSGPWQDQGLCLVDWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQEKKPWKFQVDTYGLCAIV  259 (351)
Q Consensus       180 Nill~~~~~~~~~~~~~~~~~~~~~~~~l~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il  259 (351)
                      ||+++                 .++.++|+|||.+................++..|+|||.+.+..++.++|+|||||++
T Consensus       170 Nill~-----------------~~~~~kL~dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l  232 (307)
T cd05098         170 NVLVT-----------------EDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLL  232 (307)
T ss_pred             heEEc-----------------CCCcEEECCCcccccccccchhhccccCCCccceeChHHhccCCCCcHHHHHHHHHHH
Confidence            99998                 6677999999988643211111111122345689999999888889999999999999


Q ss_pred             HHHHh-CccccccccCCCCCce-eeecCcchhhhhHHHHHHHHHHHHhcCCCCCChHHHHHHHHH
Q 018699          260 HMMLH-NSYMEIEKKASPDGGL-VYLPKLSFKRYWKVELWKSLFTNLLNMSSGNDKEVLQNLQKS  322 (351)
Q Consensus       260 ~~l~~-g~~p~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~~~  322 (351)
                      |+|++ |..||........... ........+...+ ..+.+||.+||..+|++||++.+++.+.
T Consensus       233 ~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~li~~~l~~~p~~Rps~~evl~~l  296 (307)
T cd05098         233 WEIFTLGGSPYPGVPVEELFKLLKEGHRMDKPSNCT-NELYMMMRDCWHAVPSQRPTFKQLVEDL  296 (307)
T ss_pred             HHHHcCCCCCCCcCCHHHHHHHHHcCCCCCCCCcCC-HHHHHHHHHHcccChhhCcCHHHHHHHH
Confidence            99998 7888754332100000 0011122233334 7889999999999999999999998763

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins

Probab=100.00  E-value=2.6e-37  Score=272.10  Aligned_cols=253  Identities=17%  Similarity=0.151  Sum_probs=197.7

Q ss_pred             eeEEEEEEeeccCceEEEEEEecCCCCceEEEEecCCCCCh-HHHHHHHHHhhhccccccccccceeeecccCeeEEEEE
Q 018699           48 KKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFPW-EFYMYRQLDQRISGRERSSFGFAHRIHLYSDYSILVCD  126 (351)
Q Consensus        48 ~~Y~i~~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~~~-e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e  126 (351)
                      ++|++.+.||.|++|.||+|. +..+++.|++|++...... ................++++..........+..++|+|
T Consensus         1 ~~~~~~~~i~~g~~~~v~~~~-~~~~~~~~~vk~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e   79 (264)
T cd06623           1 SDLERVKVLGQGSSGVVYKVR-HKPTGKIYALKKIHVDGDEEFRKQLLRELKTLRSCESPYVVKCYGAFYKEGEISIVLE   79 (264)
T ss_pred             CcceeeeeeeecCCeEEEEEE-EcCCCcEEEEEEeccCcchHHHHHHHHHHHHHHhcCCCCeeeEEEEEccCCeEEEEEE
Confidence            368999999999999999999 5668899999998766431 11122222222334457788888888888899999999


Q ss_pred             ecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHH-CCceecCCCCCcEEEeecCCcceeeccCCCCCcccCC
Q 018699          127 YLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHD-VGIIHGDFKPDNLLIRYARDELTVLDHDRSGPWQDQG  205 (351)
Q Consensus       127 ~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~-~~i~H~dl~p~Nill~~~~~~~~~~~~~~~~~~~~~~  205 (351)
                      |+++++|.+++..    ...+++..++.++.|++.|+.+||+ .|++|+||+|+||+++                 .++.
T Consensus        80 ~~~~~~L~~~l~~----~~~l~~~~~~~~~~~l~~~l~~lh~~~~~~H~~l~~~ni~~~-----------------~~~~  138 (264)
T cd06623          80 YMDGGSLADLLKK----VGKIPEPVLAYIARQILKGLDYLHTKRHIIHRDIKPSNLLIN-----------------SKGE  138 (264)
T ss_pred             ecCCCcHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHhccCCCccCCCCHHHEEEC-----------------CCCC
Confidence            9999999999987    3678999999999999999999999 9999999999999999                 7788


Q ss_pred             eEEeecCCccccccCCCCccccccccCCCcccceeccCCCCCccchHhHHHHHHHHHHhCccccccccCCCC----Ccee
Q 018699          206 LCLVDWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQEKKPWKFQVDTYGLCAIVHMMLHNSYMEIEKKASPD----GGLV  281 (351)
Q Consensus       206 ~~l~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~p~~~~~~~~~----~~~~  281 (351)
                      ++|+|||.+......  ........++..|+|||.+.+..++.++|+||||+++|+|++|..||........    ....
T Consensus       139 ~~l~df~~~~~~~~~--~~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~  216 (264)
T cd06623         139 VKIADFGISKVLENT--LDQCNTFVGTVTYMSPERIQGESYSYAADIWSLGLTLLECALGKFPFLPPGQPSFFELMQAIC  216 (264)
T ss_pred             EEEccCccceecccC--CCcccceeecccccCHhhhCCCCCCchhhHHHHHHHHHHHHhCCCCCccccccCHHHHHHHHh
Confidence            999999988654321  1112244578899999999888889999999999999999999999866542100    0000


Q ss_pred             eecCcchhhh-hHHHHHHHHHHHHhcCCCCCChHHHHHHHHHHHH
Q 018699          282 YLPKLSFKRY-WKVELWKSLFTNLLNMSSGNDKEVLQNLQKSFQD  325 (351)
Q Consensus       282 ~~~~~~~~~~-~~~~~~~~li~~~L~~dP~~R~s~~e~l~~~~~~  325 (351)
                      .......+.. ++ ..+.++|.+||.++|++||++.+++.|+|..
T Consensus       217 ~~~~~~~~~~~~~-~~l~~li~~~l~~~p~~R~~~~~ll~~~~~~  260 (264)
T cd06623         217 DGPPPSLPAEEFS-PEFRDFISACLQKDPKKRPSAAELLQHPFIK  260 (264)
T ss_pred             cCCCCCCCcccCC-HHHHHHHHHHccCChhhCCCHHHHHhCHHHH
Confidence            1122222222 34 7899999999999999999999999998754

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of

>cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor

Probab=100.00  E-value=1.2e-37  Score=282.03  Aligned_cols=255  Identities=14%  Similarity=0.105  Sum_probs=188.3

Q ss_pred             EcCeeEEEEEEeeccCceEEEEEEecCCCCc----eEEEEecCCCCChH-HHHHHHHHhhhccccccccccceeeecccC
Q 018699           45 IGGKKYQIKGCAGQGGFAKVFKAYVNGDPED----VVALKIQKPAFPWE-FYMYRQLDQRISGRERSSFGFAHRIHLYSD  119 (351)
Q Consensus        45 i~~~~Y~i~~~lg~G~~g~V~~a~~~~~~~~----~vaiK~~~~~~~~e-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  119 (351)
                      +...+|++.+.||+|+||+||+|.+. .+++    .||+|++....... ...+...........|++++........ +
T Consensus         4 ~~~~~f~~~~~lg~G~~g~Vy~~~~~-~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~g~~~~-~   81 (316)
T cd05108           4 LKETEFKKIKVLGSGAFGTVYKGLWI-PEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLT-S   81 (316)
T ss_pred             cchhhceeeeeeecCCCceEEEEEEe-cCCCccceeEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEcC-C
Confidence            45678999999999999999999853 2333    48999987543221 1122222233445567888877776654 3


Q ss_pred             eeEEEEEecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeeccCCCC
Q 018699          120 YSILVCDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSG  199 (351)
Q Consensus       120 ~~~lv~e~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~~~~  199 (351)
                      ..++|+||+++|+|.+++...   ...++...+..++.||+.||+|||++||+|+||||+||+++               
T Consensus        82 ~~~~v~e~~~~g~l~~~l~~~---~~~~~~~~~~~~~~qi~~~L~~LH~~~iiH~dlkp~Nill~---------------  143 (316)
T cd05108          82 TVQLITQLMPFGCLLDYVREH---KDNIGSQYLLNWCVQIAKGMNYLEERRLVHRDLAARNVLVK---------------  143 (316)
T ss_pred             CceeeeecCCCCCHHHHHHhc---cccCCHHHHHHHHHHHHHHHHHHHhcCeeccccchhheEec---------------
Confidence            567999999999999998864   34688889999999999999999999999999999999998               


Q ss_pred             CcccCCeEEeecCCccccccCCCCccccccccCCCcccceeccCCCCCccchHhHHHHHHHHHHh-CccccccccCCCC-
Q 018699          200 PWQDQGLCLVDWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQEKKPWKFQVDTYGLCAIVHMMLH-NSYMEIEKKASPD-  277 (351)
Q Consensus       200 ~~~~~~~~l~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~-g~~p~~~~~~~~~-  277 (351)
                        .++.++|+|||++................++..|+|||.+.+..++.++|||||||++|+|++ |..||........ 
T Consensus       144 --~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slGv~l~el~t~g~~p~~~~~~~~~~  221 (316)
T cd05108         144 --TPQHVKITDFGLAKLLGADEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEIS  221 (316)
T ss_pred             --CCCcEEEccccccccccCCCcceeccCCccceeecChHHhccCCCCchhhhHHHHHHHHHHHcCCCCCCCCCCHHHHH
Confidence              677899999999875432222111222234567999999998889999999999999999997 8998864332100 


Q ss_pred             CceeeecCcchhhhhHHHHHHHHHHHHhcCCCCCChHHHHHHHHH
Q 018699          278 GGLVYLPKLSFKRYWKVELWKSLFTNLLNMSSGNDKEVLQNLQKS  322 (351)
Q Consensus       278 ~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~~~  322 (351)
                      .........+.+...+ ..+.+++.+||..||++||++.+++.+.
T Consensus       222 ~~~~~~~~~~~~~~~~-~~~~~li~~cl~~~p~~Rps~~~l~~~l  265 (316)
T cd05108         222 SILEKGERLPQPPICT-IDVYMIMVKCWMIDADSRPKFRELIIEF  265 (316)
T ss_pred             HHHhCCCCCCCCCCCC-HHHHHHHHHHccCChhhCcCHHHHHHHH
Confidence            0000111112222233 6789999999999999999999999873

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor

>cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases

Probab=100.00  E-value=1.4e-36  Score=271.20  Aligned_cols=253  Identities=19%  Similarity=0.140  Sum_probs=193.4

Q ss_pred             eeEEEEEEeeccCceEEEEEEecCCCCceEEEEecCCCCCh--HHHHHHHHHhhhccccccccccceeeec--ccCeeEE
Q 018699           48 KKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFPW--EFYMYRQLDQRISGRERSSFGFAHRIHL--YSDYSIL  123 (351)
Q Consensus        48 ~~Y~i~~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~~~--e~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~l  123 (351)
                      ++|+..+.||.|++|.||+|. +..+++.+|+|.+......  .....+++ ..+....|++++.+...+.  ..+.+++
T Consensus         1 ~~~~~~~~lg~g~~~~v~~~~-~~~~~~~~~~k~~~~~~~~~~~~~~~~e~-~~l~~l~h~~iv~~~~~~~~~~~~~~~l   78 (287)
T cd06621           1 EKIVELSRLGEGAGGSVTKCR-LKNTGMIFALKTITTDPNPDLQKQILREL-EINKSCKSPYIVKYYGAFLDESSSSIGI   78 (287)
T ss_pred             CceEEEEEeccCCceEEEEEE-ECCCCeEEEEEEEecCCchHHHHHHHHHH-HHHHhCCCCCeeeeeeEEEccCCCeEEE
Confidence            479999999999999999999 5667899999998754331  22223332 3344556778877766553  3457899


Q ss_pred             EEEecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeeccCCCCCccc
Q 018699          124 VCDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSGPWQD  203 (351)
Q Consensus       124 v~e~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~~~~~~~~  203 (351)
                      ||||+++++|.+++.........+++..+..++.|++.|++|||+.|++|+||+|+||+++                 .+
T Consensus        79 v~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~i~H~dl~~~nil~~-----------------~~  141 (287)
T cd06621          79 AMEYCEGGSLDSIYKKVKKRGGRIGEKVLGKIAESVLKGLSYLHSRKIIHRDIKPSNILLT-----------------RK  141 (287)
T ss_pred             EEEecCCCCHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEe-----------------cC
Confidence            9999999999998876543356789999999999999999999999999999999999998                 66


Q ss_pred             CCeEEeecCCccccccCCCCccccccccCCCcccceeccCCCCCccchHhHHHHHHHHHHhCccccccccCCCC-----C
Q 018699          204 QGLCLVDWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQEKKPWKFQVDTYGLCAIVHMMLHNSYMEIEKKASPD-----G  278 (351)
Q Consensus       204 ~~~~l~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~p~~~~~~~~~-----~  278 (351)
                      +.++|+|||++......    ......++..|+|||.+.+..++.++|+|||||++|+|++|..||........     .
T Consensus       142 ~~~~l~dfg~~~~~~~~----~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~  217 (287)
T cd06621         142 GQVKLCDFGVSGELVNS----LAGTFTGTSFYMAPERIQGKPYSITSDVWSLGLTLLEVAQNRFPFPPEGEPPLGPIELL  217 (287)
T ss_pred             CeEEEeecccccccccc----ccccccCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCCcccCCCCChHHHH
Confidence            77999999987543211    11233567889999999888899999999999999999999999876532100     0


Q ss_pred             cee-------eecCcchhhhhHHHHHHHHHHHHhcCCCCCChHHHHHHHHHHH
Q 018699          279 GLV-------YLPKLSFKRYWKVELWKSLFTNLLNMSSGNDKEVLQNLQKSFQ  324 (351)
Q Consensus       279 ~~~-------~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~~~~~  324 (351)
                      ...       ..........|+ +.+.+||.+||.+||.+||++.|++.|+|.
T Consensus       218 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~li~~~l~~~p~~Rpt~~eil~~~~~  269 (287)
T cd06621         218 SYIVNMPNPELKDEPGNGIKWS-EEFKDFIKQCLEKDPTRRPTPWDMLEHPWI  269 (287)
T ss_pred             HHHhcCCchhhccCCCCCCchH-HHHHHHHHHHcCCCcccCCCHHHHHhCccc
Confidence            000       000111112344 789999999999999999999999999875

Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7

Probab=100.00  E-value=2e-37  Score=273.64  Aligned_cols=253  Identities=15%  Similarity=0.108  Sum_probs=191.3

Q ss_pred             eeEEEEEEeeccCceEEEEEEecCCCCceEEEEecCCCCChHHHHHH---HHHhhhccccccccccceeeecccCeeEEE
Q 018699           48 KKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFPWEFYMYR---QLDQRISGRERSSFGFAHRIHLYSDYSILV  124 (351)
Q Consensus        48 ~~Y~i~~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~~~e~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv  124 (351)
                      ++|++.+.||+|++|.||+|. ...+++.+|||.+......+.....   ..........|++++.....+..++..+++
T Consensus         2 ~~y~~~~~ig~g~~g~v~~~~-~~~~~~~~~vK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~v   80 (267)
T cd08229           2 ANFRIEKKIGRGQFSEVYRAT-CLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNIV   80 (267)
T ss_pred             chhhhhhhhcccCCeEEEEEe-ecCCCceEEEEeeeehhhhhHHHHHHHHHHHHHHHHccCCchhhhhheeEeCCeEEEE
Confidence            478999999999999999999 4667899999987643222211111   112233445677888878777778899999


Q ss_pred             EEecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeeccCCCCCcccC
Q 018699          125 CDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSGPWQDQ  204 (351)
Q Consensus       125 ~e~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~~~~~~~~~  204 (351)
                      |||+++++|.+++......+..+++..++.++.|++.|+.|||++|++|+||+|+||+++                 .++
T Consensus        81 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~p~nili~-----------------~~~  143 (267)
T cd08229          81 LELADAGDLSRMIKHFKKQKRLIPEKTVWKYFVQLCSALEHMHSRRVMHRDIKPANVFIT-----------------ATG  143 (267)
T ss_pred             EEecCCCCHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEc-----------------CCC
Confidence            999999999999876433345789999999999999999999999999999999999998                 677


Q ss_pred             CeEEeecCCccccccCCCCccccccccCCCcccceeccCCCCCccchHhHHHHHHHHHHhCccccccccCCCCC---cee
Q 018699          205 GLCLVDWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQEKKPWKFQVDTYGLCAIVHMMLHNSYMEIEKKASPDG---GLV  281 (351)
Q Consensus       205 ~~~l~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~p~~~~~~~~~~---~~~  281 (351)
                      .++|+|||++......  ........++..|+|||.+.+..++.++|+||+|+++|+|++|..||.........   ...
T Consensus       144 ~~~l~dfg~~~~~~~~--~~~~~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~  221 (267)
T cd08229         144 VVKLGDLGLGRFFSSK--TTAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKIE  221 (267)
T ss_pred             CEEECcchhhhccccC--CcccccccCCcCccCHHHhcCCCccchhhHHHHHHHHHHHHhCCCCcccccchHHHHhhhhh
Confidence            8999999987543211  11223446788999999998888899999999999999999999998644321000   000


Q ss_pred             eecCcchhhhhHHHHHHHHHHHHhcCCCCCChHHHHHHH
Q 018699          282 YLPKLSFKRYWKVELWKSLFTNLLNMSSGNDKEVLQNLQ  320 (351)
Q Consensus       282 ~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~  320 (351)
                      .....+.+....++.++++|.+||+.||++|||+.+++.
T Consensus       222 ~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~i~~  260 (267)
T cd08229         222 QCDYPPLPSDHYSEELRQLVNMCINPDPEKRPDITYVYD  260 (267)
T ss_pred             cCCCCCCCcccccHHHHHHHHHhcCCCcccCCCHHHHHH
Confidence            111111222112278999999999999999999998765

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase.

>cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors

Probab=100.00  E-value=1.1e-37  Score=279.10  Aligned_cols=261  Identities=13%  Similarity=0.129  Sum_probs=192.2

Q ss_pred             EEEEcCeeEEEEEEeeccCceEEEEEEecC----CCCceEEEEecCCCCChH--HHHHHHHHhhhccc-cccccccceee
Q 018699           42 TIEIGGKKYQIKGCAGQGGFAKVFKAYVNG----DPEDVVALKIQKPAFPWE--FYMYRQLDQRISGR-ERSSFGFAHRI  114 (351)
Q Consensus        42 ~~~i~~~~Y~i~~~lg~G~~g~V~~a~~~~----~~~~~vaiK~~~~~~~~e--~~~~~~~~~~~~~~-~~~~~~~~~~~  114 (351)
                      .+.+..++|++.+.||+|++|.||+|.+..    .....+|+|.+......+  ....+++. ..... .++++.....+
T Consensus         6 ~~~~~~~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~-~l~~l~~h~~i~~~~~~   84 (293)
T cd05053           6 EWELPRDRLTLGKPLGEGAFGQVVKAEAVGLDNPNETSTVAVKMLKDDATEKDLSDLVSEME-MMKMIGKHKNIINLLGV   84 (293)
T ss_pred             ccccCHhHeEEeeEecccccccEEEEEEecCCCCCCceeEEEEEccCCCCHHHHHHHHHHHH-HHHhhcCCCCeeeEEEE
Confidence            456777899999999999999999998532    234789999987653322  11222222 22223 57788888887


Q ss_pred             ecccCeeEEEEEecCCCCHHHHHHHHH------------hhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEE
Q 018699          115 HLYSDYSILVCDYLSQGTLQDAINSYV------------VIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLL  182 (351)
Q Consensus       115 ~~~~~~~~lv~e~~~~~sL~~~l~~~~------------~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nil  182 (351)
                      ...++..+++|||+++++|..++....            .....+++..+..++.|++.|++|||++||+|+||+|+||+
T Consensus        85 ~~~~~~~~li~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~ivH~dlkp~Nil  164 (293)
T cd05053          85 CTQEGPLYVVVEYAAHGNLRDFLRARRPPGEYASPDDPRPPEETLTQKDLVSFAYQVARGMEFLASKKCIHRDLAARNVL  164 (293)
T ss_pred             EcCCCCeEEEEEeCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHCCccccccceeeEE
Confidence            777888999999999999999987531            11356889999999999999999999999999999999999


Q ss_pred             EeecCCcceeeccCCCCCcccCCeEEeecCCccccccCCCCccccccccCCCcccceeccCCCCCccchHhHHHHHHHHH
Q 018699          183 IRYARDELTVLDHDRSGPWQDQGLCLVDWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQEKKPWKFQVDTYGLCAIVHMM  262 (351)
Q Consensus       183 l~~~~~~~~~~~~~~~~~~~~~~~~l~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~l  262 (351)
                      ++                 .++.++|+|||.+................++..|+|||.+.+..++.++|||||||++|++
T Consensus       165 ~~-----------------~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el  227 (293)
T cd05053         165 VT-----------------EDHVMKIADFGLARDIHHIDYYRKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEI  227 (293)
T ss_pred             Ec-----------------CCCeEEeCccccccccccccceeccCCCCCCccccCHHHhccCCcCcccceeehhhHHHHH
Confidence            98                 6778999999988643211111111222345679999999888889999999999999999


Q ss_pred             Hh-CccccccccCCCCCce-eeecCcchhhhhHHHHHHHHHHHHhcCCCCCChHHHHHHHH
Q 018699          263 LH-NSYMEIEKKASPDGGL-VYLPKLSFKRYWKVELWKSLFTNLLNMSSGNDKEVLQNLQK  321 (351)
Q Consensus       263 ~~-g~~p~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~~  321 (351)
                      ++ |..||........... ........+...+ ..+.+|+.+||..||++|||+.+++.+
T Consensus       228 ~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~li~~~l~~~p~~Rps~~eil~~  287 (293)
T cd05053         228 FTLGGSPYPGIPVEELFKLLKEGYRMEKPQNCT-QELYHLMRDCWHEVPSQRPTFKQLVED  287 (293)
T ss_pred             hcCCCCCCCCCCHHHHHHHHHcCCcCCCCCCCC-HHHHHHHHHHcccCcccCcCHHHHHHH
Confidence            97 8888764332110000 0011112222223 788999999999999999999999876

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation,

>cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5

Probab=100.00  E-value=4.2e-38  Score=281.72  Aligned_cols=254  Identities=17%  Similarity=0.152  Sum_probs=193.9

Q ss_pred             eeEEEEEEeeccCceEEEEEEecCCCCceEEEEecCCCCChHHHHHHHHHhhhccccccccccceeeecccCeeEEEEEe
Q 018699           48 KKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFPWEFYMYRQLDQRISGRERSSFGFAHRIHLYSDYSILVCDY  127 (351)
Q Consensus        48 ~~Y~i~~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~  127 (351)
                      +.|.....||.|+||.||++. +..+++.||||.+..........+...........++++.........++..|+||||
T Consensus        22 ~~~~~~~~lg~g~~g~v~~~~-~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~~~~~lv~e~  100 (292)
T cd06658          22 EYLDSFIKIGEGSTGIVCIAT-EKHTGKQVAVKKMDLRKQQRRELLFNEVVIMRDYHHENVVDMYNSYLVGDELWVVMEF  100 (292)
T ss_pred             HHHhhhhcccCCCCeEEEEEE-ECCCCCEEEEEEEecchHHHHHHHHHHHHHHHhCCCCcHHHHHHheecCCeEEEEEeC
Confidence            556767889999999999999 5677899999998654333222222222234445677877777777778899999999


Q ss_pred             cCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeeccCCCCCcccCCeE
Q 018699          128 LSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSGPWQDQGLC  207 (351)
Q Consensus       128 ~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~~~~~~~~~~~~  207 (351)
                      +++++|.+++..     ..+++..++.++.||+.|+.|||++|++|+||+|+||+++                 .++.++
T Consensus       101 ~~~~~L~~~~~~-----~~l~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~Nill~-----------------~~~~~k  158 (292)
T cd06658         101 LEGGALTDIVTH-----TRMNEEQIATVCLSVLRALSYLHNQGVIHRDIKSDSILLT-----------------SDGRIK  158 (292)
T ss_pred             CCCCcHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHHCCEeecCCCHHHEEEc-----------------CCCCEE
Confidence            999999998754     4688999999999999999999999999999999999998                 677899


Q ss_pred             EeecCCccccccCCCCccccccccCCCcccceeccCCCCCccchHhHHHHHHHHHHhCccccccccCCCCCce---eeec
Q 018699          208 LVDWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQEKKPWKFQVDTYGLCAIVHMMLHNSYMEIEKKASPDGGL---VYLP  284 (351)
Q Consensus       208 l~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~p~~~~~~~~~~~~---~~~~  284 (351)
                      |+|||++.....  .........++..|+|||.+.+..++.++|+||+|+++|+|++|..||...........   ....
T Consensus       159 L~dfg~~~~~~~--~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~~~~~~~~~~~~  236 (292)
T cd06658         159 LSDFGFCAQVSK--EVPKRKSLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMIDGEPPYFNEPPLQAMRRIRDNLPP  236 (292)
T ss_pred             EccCcchhhccc--ccccCceeecCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCC
Confidence            999998854321  11222334678899999999888889999999999999999999999875432210000   0011


Q ss_pred             CcchhhhhHHHHHHHHHHHHhcCCCCCChHHHHHHHHHHHHHH
Q 018699          285 KLSFKRYWKVELWKSLFTNLLNMSSGNDKEVLQNLQKSFQDYL  327 (351)
Q Consensus       285 ~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~~~~~~~~  327 (351)
                      ........+ ..+.++|.+||..||.+||++.++++|+|....
T Consensus       237 ~~~~~~~~~-~~~~~li~~~l~~~P~~Rpt~~~il~~~~~~~~  278 (292)
T cd06658         237 RVKDSHKVS-SVLRGFLDLMLVREPSQRATAQELLQHPFLKLA  278 (292)
T ss_pred             ccccccccC-HHHHHHHHHHccCChhHCcCHHHHhhChhhhcc
Confidence            111111223 678999999999999999999999999875543

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express

>cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase

Probab=100.00  E-value=1.5e-37  Score=276.53  Aligned_cols=247  Identities=19%  Similarity=0.211  Sum_probs=184.9

Q ss_pred             EEEEEEeeccCceEEEEEEecCCCCceEEEEecCCCCCh--HHHHHHHHHhhhccccccccccceeeeccc--CeeEEEE
Q 018699           50 YQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFPW--EFYMYRQLDQRISGRERSSFGFAHRIHLYS--DYSILVC  125 (351)
Q Consensus        50 Y~i~~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~~~--e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~lv~  125 (351)
                      |++.+.||.|++|.||+|. +..+++.||+|.+......  ....+.++........|+++.....++...  +..++||
T Consensus         1 y~~~~~lg~g~~~~v~~~~-~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~lv~   79 (282)
T cd07831           1 YKILGKIGEGTFSEVLKAQ-SRKTGKYYAIKCMKKHFKSLEQVNNLREIQALRRLSPHPNILRLIEVLFDRKTGRLALVF   79 (282)
T ss_pred             CceEeeccccccceEEEEE-EcCCCcEEEEEEehhccCCchhhhHHHHHHHHhhcCCCCCccceEEEEecCCCCcEEEEE
Confidence            7889999999999999999 5677899999998764322  222223332222233477888888777666  7899999


Q ss_pred             EecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeeccCCCCCcccCC
Q 018699          126 DYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSGPWQDQG  205 (351)
Q Consensus       126 e~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~~~~~~~~~~  205 (351)
                      ||+. ++|.+.+...   ...+++..++.++.|++.|+.|||+.|++|+||+|+||+++                 . +.
T Consensus        80 e~~~-~~l~~~l~~~---~~~~~~~~~~~~~~qi~~~L~~LH~~~i~H~dl~p~ni~l~-----------------~-~~  137 (282)
T cd07831          80 ELMD-MNLYELIKGR---KRPLPEKRVKSYMYQLLKSLDHMHRNGIFHRDIKPENILIK-----------------D-DI  137 (282)
T ss_pred             ecCC-ccHHHHHHhc---cCCCCHHHHHHHHHHHHHHHHHHHHCCceecccCHHHEEEc-----------------C-CC
Confidence            9995 5888887653   35789999999999999999999999999999999999999                 5 77


Q ss_pred             eEEeecCCccccccCCCCccccccccCCCcccceecc-CCCCCccchHhHHHHHHHHHHhCccccccccCCC--------
Q 018699          206 LCLVDWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQE-KKPWKFQVDTYGLCAIVHMMLHNSYMEIEKKASP--------  276 (351)
Q Consensus       206 ~~l~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~-~~~~~~~~DiwslG~il~~l~~g~~p~~~~~~~~--------  276 (351)
                      ++|+|||.+......   .......++..|+|||.+. +..++.++||||+||++|+|++|..||...+...        
T Consensus       138 ~kl~dfg~~~~~~~~---~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slGv~l~el~~~~~p~~~~~~~~~~~~~~~~  214 (282)
T cd07831         138 LKLADFGSCRGIYSK---PPYTEYISTRWYRAPECLLTDGYYGPKMDIWAVGCVFFEILSLFPLFPGTNELDQIAKIHDV  214 (282)
T ss_pred             eEEEecccccccccC---CCcCCCCCCcccCChhHhhcCCCCCcchhHHHHHHHHHHHHcCCcCCCCCCHHHHHHHHHHH
Confidence            999999988654321   1223345788999999764 4556889999999999999999999996443210        


Q ss_pred             ----------------CCceeeecCc-----chhhhhHHHHHHHHHHHHhcCCCCCChHHHHHHHHHH
Q 018699          277 ----------------DGGLVYLPKL-----SFKRYWKVELWKSLFTNLLNMSSGNDKEVLQNLQKSF  323 (351)
Q Consensus       277 ----------------~~~~~~~~~~-----~~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~~~~  323 (351)
                                      ...+......     ......+ ..+.++|.+||+++|++||++.++++|||
T Consensus       215 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~li~~~l~~~P~~R~~~~~~l~~~~  281 (282)
T cd07831         215 LGTPDAEVLKKFRKSRHMNYNFPSKKGTGLRKLLPNAS-AEGLDLLKKLLAYDPDERITAKQALRHPY  281 (282)
T ss_pred             cCCCCHHHHHhhcccccccccCcccccccHHHHccccc-HHHHHHHHHHhccCcccccCHHHHhhCCC
Confidence                            0000000000     0001122 78999999999999999999999999986

Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation.

>KOG0574 consensus STE20-like serine/threonine kinase MST [Signal transduction mechanisms]

Probab=100.00  E-value=2.5e-39  Score=272.09  Aligned_cols=253  Identities=17%  Similarity=0.164  Sum_probs=201.0

Q ss_pred             eeEEEEEEeeccCceEEEEEEecCCCCceEEEEecCCCCChHHHHHHHHHhhhccccccccccceeeecccCeeEEEEEe
Q 018699           48 KKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFPWEFYMYRQLDQRISGRERSSFGFAHRIHLYSDYSILVCDY  127 (351)
Q Consensus        48 ~~Y~i~~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~  127 (351)
                      +-|.++.+||.|+||.||+|. ++.+|+.+|||.+.-+.. -.++.+++.- ......+.++...........+|+||||
T Consensus        33 EVFDi~~KLGEGSYGSV~KAI-H~EsG~v~AIK~VPV~sD-LQEIIKEISI-MQQC~S~yVVKYYGSYFK~sDLWIVMEY  109 (502)
T KOG0574|consen   33 EVFDIVGKLGEGSYGSVHKAI-HRESGHVLAIKKVPVDTD-LQEIIKEISI-MQQCKSKYVVKYYGSYFKHSDLWIVMEY  109 (502)
T ss_pred             HHHHHHHHhcCCcchHHHHHH-HhccCcEEEEEecCccch-HHHHHHHHHH-HHHcCCchhhhhhhhhccCCceEeehhh
Confidence            347889999999999999999 578899999999765421 1122222221 1122333444444444446678999999


Q ss_pred             cCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeeccCCCCCcccCCeE
Q 018699          128 LSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSGPWQDQGLC  207 (351)
Q Consensus       128 ~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~~~~~~~~~~~~  207 (351)
                      |..|++.+.+..+   ++++++.++..+++..+.||.|||...-+|||||..||+++                 .+|..|
T Consensus       110 CGAGSiSDI~R~R---~K~L~E~EIs~iL~~TLKGL~YLH~~~KIHRDIKAGNILLN-----------------T~G~AK  169 (502)
T KOG0574|consen  110 CGAGSISDIMRAR---RKPLSEQEISAVLRDTLKGLQYLHDLKKIHRDIKAGNILLN-----------------TDGIAK  169 (502)
T ss_pred             cCCCcHHHHHHHh---cCCccHHHHHHHHHHHHhHHHHHHHHHHHHhhcccccEEEc-----------------ccchhh
Confidence            9999999999887   68999999999999999999999999999999999999999                 788899


Q ss_pred             EeecCCccccccCCCCccccccccCCCcccceeccCCCCCccchHhHHHHHHHHHHhCccccccccCCCCCceee---ec
Q 018699          208 LVDWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQEKKPWKFQVDTYGLCAIVHMMLHNSYMEIEKKASPDGGLVY---LP  284 (351)
Q Consensus       208 l~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~p~~~~~~~~~~~~~~---~~  284 (351)
                      |+|||.|..++..  -...++..|||-|||||++..-.|+..+||||||++..+|..|++||..-.+......+.   ++
T Consensus       170 LADFGVAGQLTDT--MAKRNTVIGTPFWMAPEVI~EIGY~~~ADIWSLGITaIEMAEG~PPYsDIHPMRAIFMIPT~PPP  247 (502)
T KOG0574|consen  170 LADFGVAGQLTDT--MAKRNTVIGTPFWMAPEVIEEIGYDTKADIWSLGITAIEMAEGRPPYSDIHPMRAIFMIPTKPPP  247 (502)
T ss_pred             hhhccccchhhhh--HHhhCccccCcccccHHHHHHhccchhhhHhhhcchhhhhhcCCCCcccccccceeEeccCCCCC
Confidence            9999988654321  223466789999999999999999999999999999999999999998665542222211   22


Q ss_pred             CcchhhhhHHHHHHHHHHHHhcCCCCCChHHHHHHHHHHHHH
Q 018699          285 KLSFKRYWKVELWKSLFTNLLNMSSGNDKEVLQNLQKSFQDY  326 (351)
Q Consensus       285 ~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~~~~~~~  326 (351)
                      ...-|+.|+ .++.+||++||.+.|++|.|+.++++|+|...
T Consensus       248 TF~KPE~WS-~~F~DFi~~CLiK~PE~R~TA~~L~~H~Fikn  288 (502)
T KOG0574|consen  248 TFKKPEEWS-SEFNDFIRSCLIKKPEERKTALRLCEHTFIKN  288 (502)
T ss_pred             CCCChHhhh-hHHHHHHHHHhcCCHHHHHHHHHHhhhhhhcC
Confidence            233578899 99999999999999999999999999998543

>cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3

Probab=100.00  E-value=2.4e-37  Score=275.84  Aligned_cols=251  Identities=20%  Similarity=0.232  Sum_probs=188.4

Q ss_pred             eeEEEEEEeeccCceEEEEEEecCCCCceEEEEecCCCCChH--HHHHHHHHhhhccccccccccceeeecccCeeEEEE
Q 018699           48 KKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFPWE--FYMYRQLDQRISGRERSSFGFAHRIHLYSDYSILVC  125 (351)
Q Consensus        48 ~~Y~i~~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~~~e--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~  125 (351)
                      ++|++.+.||+|++|.||+|. +..+++.||+|.+.......  ...............|+++..+..++..++..|+|+
T Consensus         1 ~~y~~~~~lg~g~~~~vy~~~-~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~   79 (286)
T cd07846           1 EKYENLGLVGEGSYGMVMKCK-HKETGQIVAIKKFLESEDDKMVKKIAMREIRMLKQLRHENLVNLIEVFRRKKRLYLVF   79 (286)
T ss_pred             CceeEeeeeccCCCeEEEEEE-ECCCCCEEEEEeHhhccCcchhhHHHHHHHHHHHhcCCcchhhHHHhcccCCeEEEEE
Confidence            479999999999999999999 45678999999876543222  111111122334456778888888888888999999


Q ss_pred             EecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeeccCCCCCcccCC
Q 018699          126 DYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSGPWQDQG  205 (351)
Q Consensus       126 e~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~~~~~~~~~~  205 (351)
                      ||+.+++|..+...    ...+++..++.++.|++.|++|||+.|++|+||+|+||+++                 +++.
T Consensus        80 e~~~~~~l~~~~~~----~~~~~~~~~~~~~~~i~~~l~~LH~~~i~h~~l~p~ni~~~-----------------~~~~  138 (286)
T cd07846          80 EFVDHTVLDDLEKY----PNGLDESRVRKYLFQILRGIEFCHSHNIIHRDIKPENILVS-----------------QSGV  138 (286)
T ss_pred             ecCCccHHHHHHhc----cCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEEC-----------------CCCc
Confidence            99998888877654    35689999999999999999999999999999999999998                 6778


Q ss_pred             eEEeecCCccccccCCCCccccccccCCCcccceeccC-CCCCccchHhHHHHHHHHHHhCccccccccCCCC-------
Q 018699          206 LCLVDWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQEK-KPWKFQVDTYGLCAIVHMMLHNSYMEIEKKASPD-------  277 (351)
Q Consensus       206 ~~l~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~~DiwslG~il~~l~~g~~p~~~~~~~~~-------  277 (351)
                      ++|+|||++.....  .........++..|+|||.+.+ ..++.++||||+|+++|+|++|..||........       
T Consensus       139 ~~l~dfg~~~~~~~--~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~  216 (286)
T cd07846         139 VKLCDFGFARTLAA--PGEVYTDYVATRWYRAPELLVGDTKYGRAVDIWAVGCLVTEMLTGEPLFPGDSDIDQLYHIIKC  216 (286)
T ss_pred             EEEEeeeeeeeccC--CccccCcccceeeccCcHHhccccccCchHhHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHHH
Confidence            99999998864321  1222333457889999999865 4467899999999999999999988853321100       


Q ss_pred             -Cce----------------eeecCc----c---hhhhhHHHHHHHHHHHHhcCCCCCChHHHHHHHHHH
Q 018699          278 -GGL----------------VYLPKL----S---FKRYWKVELWKSLFTNLLNMSSGNDKEVLQNLQKSF  323 (351)
Q Consensus       278 -~~~----------------~~~~~~----~---~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~~~~  323 (351)
                       +..                ...+..    .   ....++ ..+.+|+.+||+++|++||++.++++|+|
T Consensus       217 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~li~~~l~~~P~~Rp~~~~il~~~~  285 (286)
T cd07846         217 LGNLIPRHQEIFQKNPLFAGMRLPEVKEIEPLEKRFPKLS-GLVLDLAKQCLRIDPDDRPSSSQLLHHEF  285 (286)
T ss_pred             hCCCchhhHHHhccchHhhccccccccCcchHHHhCCCcC-HHHHHHHHHHhcCCcccchhHHHHhcCCC
Confidence             000                000000    0   001123 67899999999999999999999999976

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI

>cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src

Probab=100.00  E-value=2.6e-37  Score=272.34  Aligned_cols=252  Identities=12%  Similarity=0.090  Sum_probs=184.7

Q ss_pred             EcCeeEEEEEEeeccCceEEEEEEecCCCCceEEEEecCCCCChHHHHHHHHHhhhccccccccccceeeecccCeeEEE
Q 018699           45 IGGKKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFPWEFYMYRQLDQRISGRERSSFGFAHRIHLYSDYSILV  124 (351)
Q Consensus        45 i~~~~Y~i~~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv  124 (351)
                      +..++|++.++||+|++|+||+|.+ ..+ ..||+|.+............++. ......++++....... ..+..++|
T Consensus         3 ~~~~~~~~~~~lg~g~~~~v~~~~~-~~~-~~valK~~~~~~~~~~~~~~E~~-~l~~l~~~~i~~~~~~~-~~~~~~lv   78 (262)
T cd05071           3 IPRESLRLEVKLGQGCFGEVWMGTW-NGT-TRVAIKTLKPGTMSPEAFLQEAQ-VMKKLRHEKLVQLYAVV-SEEPIYIV   78 (262)
T ss_pred             CChHHeeEeeecCCCCCCcEEEEEe-cCC-ceEEEEecccCccCHHHHHHHHH-HHHhCCCCCcceEEEEE-CCCCcEEE
Confidence            5568899999999999999999985 333 45999998864433322222222 22334566766666554 34567999


Q ss_pred             EEecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeeccCCCCCcccC
Q 018699          125 CDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSGPWQDQ  204 (351)
Q Consensus       125 ~e~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~~~~~~~~~  204 (351)
                      |||+++++|.+++....  +..+++..+..++.|++.|+++||+.+++|+||+|+||+++                 .++
T Consensus        79 ~e~~~~~~L~~~~~~~~--~~~~~~~~~~~~~~~l~~aL~~lH~~~i~H~dl~p~Nill~-----------------~~~  139 (262)
T cd05071          79 TEYMSKGSLLDFLKGEM--GKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVG-----------------ENL  139 (262)
T ss_pred             EEcCCCCcHHHHHhhcc--ccCCCHHHHHHHHHHHHHHHHHHHHCCccccccCcccEEEc-----------------CCC
Confidence            99999999999997632  34678899999999999999999999999999999999999                 677


Q ss_pred             CeEEeecCCccccccCCCCccccccccCCCcccceeccCCCCCccchHhHHHHHHHHHHh-CccccccccCCCCCcee-e
Q 018699          205 GLCLVDWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQEKKPWKFQVDTYGLCAIVHMMLH-NSYMEIEKKASPDGGLV-Y  282 (351)
Q Consensus       205 ~~~l~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~-g~~p~~~~~~~~~~~~~-~  282 (351)
                      .++|+|||.+....... ........++..|+|||...+..++.++|||||||++|++++ |..||............ .
T Consensus       140 ~~~L~dfg~~~~~~~~~-~~~~~~~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l~ellt~g~~p~~~~~~~~~~~~~~~  218 (262)
T cd05071         140 VCKVADFGLARLIEDNE-YTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVER  218 (262)
T ss_pred             cEEeccCCceeeccccc-cccccCCcccceecCHhHhccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCChHHHHHHHhc
Confidence            79999999886433211 111223345677999999988889999999999999999999 78787543321000000 0


Q ss_pred             ecCcchhhhhHHHHHHHHHHHHhcCCCCCChHHHHHHHH
Q 018699          283 LPKLSFKRYWKVELWKSLFTNLLNMSSGNDKEVLQNLQK  321 (351)
Q Consensus       283 ~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~~  321 (351)
                      ....+.+...+ ..+.++|.+||++||++||++.+++.-
T Consensus       219 ~~~~~~~~~~~-~~l~~li~~~l~~~p~~Rp~~~~~~~~  256 (262)
T cd05071         219 GYRMPCPPECP-ESLHDLMCQCWRKEPEERPTFEYLQAF  256 (262)
T ss_pred             CCCCCCccccC-HHHHHHHHHHccCCcccCCCHHHHHHH
Confidence            01111222233 778999999999999999999887653

Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo

>cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2

Probab=100.00  E-value=2.3e-37  Score=278.40  Aligned_cols=257  Identities=12%  Similarity=0.085  Sum_probs=186.8

Q ss_pred             EcCeeEEEEEEeeccCceEEEEEEecCCCCc--eEEEEecCCCCChH--HHHHHHHHhhhccccccccccceeeecccCe
Q 018699           45 IGGKKYQIKGCAGQGGFAKVFKAYVNGDPED--VVALKIQKPAFPWE--FYMYRQLDQRISGRERSSFGFAHRIHLYSDY  120 (351)
Q Consensus        45 i~~~~Y~i~~~lg~G~~g~V~~a~~~~~~~~--~vaiK~~~~~~~~e--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  120 (351)
                      +.-++|++.+.||+|+||.||+|.+ ..++.  .+++|.........  ....+++........|++++....+....+.
T Consensus         4 ~~~~~~~~~~~lg~G~~g~V~~a~~-~~~~~~~~~~ik~~~~~~~~~~~~~~~~Ei~~l~~l~~h~~iv~~~~~~~~~~~   82 (303)
T cd05088           4 LEWNDIKFQDVIGEGNFGQVLKARI-KKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGY   82 (303)
T ss_pred             cchhhceeeeeecCCCCceEEEEEE-ccCCceeeEEEEEecccCCHHHHHHHHHHHHHHHHhcCCCCcceEEEEECCCCC
Confidence            4456899999999999999999995 34444  46777765432211  1122222221222367888888888888889


Q ss_pred             eEEEEEecCCCCHHHHHHHHHh------------hCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCC
Q 018699          121 SILVCDYLSQGTLQDAINSYVV------------IGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARD  188 (351)
Q Consensus       121 ~~lv~e~~~~~sL~~~l~~~~~------------~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~  188 (351)
                      .|+||||+++++|.+++.....            .+..+++..++.++.|++.|++|||++|++||||+|+||+++    
T Consensus        83 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~gi~H~dlkp~Nili~----  158 (303)
T cd05088          83 LYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVG----  158 (303)
T ss_pred             ceEEEEeCCCCcHHHHHHhcccccccccccccccccCcCCHHHHHHHHHHHHHHHHHHHhCCccccccchheEEec----
Confidence            9999999999999999975321            023578999999999999999999999999999999999998    


Q ss_pred             cceeeccCCCCCcccCCeEEeecCCccccccCCCCccccccccCCCcccceeccCCCCCccchHhHHHHHHHHHHh-Ccc
Q 018699          189 ELTVLDHDRSGPWQDQGLCLVDWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQEKKPWKFQVDTYGLCAIVHMMLH-NSY  267 (351)
Q Consensus       189 ~~~~~~~~~~~~~~~~~~~l~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~-g~~  267 (351)
                                   .++.++|+|||++......   ........+..|+|||.+.+..++.++|||||||++|+|++ |..
T Consensus       159 -------------~~~~~kl~dfg~~~~~~~~---~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~  222 (303)
T cd05088         159 -------------ENYVAKIADFGLSRGQEVY---VKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGT  222 (303)
T ss_pred             -------------CCCcEEeCccccCcccchh---hhcccCCCcccccCHHHHhccCCcccccchhhhhHHHHHHhcCCC
Confidence                         6778999999988532110   01111123567999999988888999999999999999998 999


Q ss_pred             ccccccCCCCCcee-eecCcchhhhhHHHHHHHHHHHHhcCCCCCChHHHHHHHHHH
Q 018699          268 MEIEKKASPDGGLV-YLPKLSFKRYWKVELWKSLFTNLLNMSSGNDKEVLQNLQKSF  323 (351)
Q Consensus       268 p~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~~~~  323 (351)
                      ||............ .......+...+ ..+.+||.+||+.+|++||++.+++.+..
T Consensus       223 p~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~li~~~l~~~p~~Rp~~~~il~~l~  278 (303)
T cd05088         223 PYCGMTCAELYEKLPQGYRLEKPLNCD-DEVYDLMRQCWREKPYERPSFAQILVSLN  278 (303)
T ss_pred             CcccCChHHHHHHHhcCCcCCCCCCCC-HHHHHHHHHHcCCChhhCcCHHHHHHHHH
Confidence            98643322100000 001111222233 67899999999999999999999998753

Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A

>cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases

Probab=100.00  E-value=6e-38  Score=279.60  Aligned_cols=251  Identities=16%  Similarity=0.121  Sum_probs=194.3

Q ss_pred             EcCeeEEEEEEeeccCceEEEEEEecCCCCceEEEEecCCCCChH--HHHHHHHHhhhccccccccccceeeecccCeeE
Q 018699           45 IGGKKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFPWE--FYMYRQLDQRISGRERSSFGFAHRIHLYSDYSI  122 (351)
Q Consensus        45 i~~~~Y~i~~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~~~e--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  122 (351)
                      +..++|++.+.||+|++|+||+|. +..+++.||+|++......+  .....+ ...+....++++..........+.++
T Consensus         2 l~~~~~~~~~~ig~g~~g~v~~~~-~~~~~~~~a~k~~~~~~~~~~~~~~~~E-~~~l~~l~h~~i~~~~~~~~~~~~~~   79 (284)
T cd06620           2 LRNEDLETISDLGAGNGGSVSKVK-HIPTGTVMAKKVVHIGAKSSVRKQILRE-LQIMHECRSPYIVSFYGAFLNENNIC   79 (284)
T ss_pred             ccHHHHHHHHHcCCCCCeEEEEEE-EcCCCcEEEEEEEEecCcchHHHHHHHH-HHHHHHcCCCCcceEeeeEecCCEEE
Confidence            345789999999999999999999 56778999999876543222  122222 22334456788888888888889999


Q ss_pred             EEEEecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHH-CCceecCCCCCcEEEeecCCcceeeccCCCCCc
Q 018699          123 LVCDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHD-VGIIHGDFKPDNLLIRYARDELTVLDHDRSGPW  201 (351)
Q Consensus       123 lv~e~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~-~~i~H~dl~p~Nill~~~~~~~~~~~~~~~~~~  201 (351)
                      +||||+++++|.+++..    .+.+++..+..++.+++.|+.|||+ .+++|+||+|+||+++                 
T Consensus        80 lv~e~~~~~~L~~~~~~----~~~~~~~~~~~~~~~i~~~l~~LH~~~~i~H~dl~p~nil~~-----------------  138 (284)
T cd06620          80 MCMEFMDCGSLDRIYKK----GGPIPVEILGKIAVAVVEGLTYLYNVHRIMHRDIKPSNILVN-----------------  138 (284)
T ss_pred             EEEecCCCCCHHHHHHh----ccCCCHHHHHHHHHHHHHHHHHHHHhcCeeccCCCHHHEEEC-----------------
Confidence            99999999999998876    4678999999999999999999997 6999999999999998                 


Q ss_pred             ccCCeEEeecCCccccccCCCCccccccccCCCcccceeccCCCCCccchHhHHHHHHHHHHhCccccccccCCCCC---
Q 018699          202 QDQGLCLVDWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQEKKPWKFQVDTYGLCAIVHMMLHNSYMEIEKKASPDG---  278 (351)
Q Consensus       202 ~~~~~~l~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~p~~~~~~~~~~---  278 (351)
                      .++.++|+|||++....    ........++..|+|||.+.+..++.++||||+||++|++++|..||.........   
T Consensus       139 ~~~~~~l~d~gl~~~~~----~~~~~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~tg~~p~~~~~~~~~~~~~  214 (284)
T cd06620         139 SRGQIKLCDFGVSGELI----NSIADTFVGTSTYMSPERIQGGKYTVKSDVWSLGISIIELALGKFPFAFSNIDDDGQDD  214 (284)
T ss_pred             CCCcEEEccCCcccchh----hhccCccccCcccCCHHHHccCCCCccchHHHHHHHHHHHHhCCCCCcccchhhhhhhh
Confidence            67789999999875421    11122346889999999998888899999999999999999999999754432000   


Q ss_pred             ---------ceeeecCcchhhh-hHHHHHHHHHHHHhcCCCCCChHHHHHHHHHH
Q 018699          279 ---------GLVYLPKLSFKRY-WKVELWKSLFTNLLNMSSGNDKEVLQNLQKSF  323 (351)
Q Consensus       279 ---------~~~~~~~~~~~~~-~~~~~~~~li~~~L~~dP~~R~s~~e~l~~~~  323 (351)
                               ..........+.. .+ ..+.+||.+||++||++||++.++++++|
T Consensus       215 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~li~~~l~~dp~~Rpt~~e~~~~~~  268 (284)
T cd06620         215 PMGILDLLQQIVQEPPPRLPSSDFP-EDLRDFVDACLLKDPTERPTPQQLCAMPP  268 (284)
T ss_pred             hhHHHHHHHHHhhccCCCCCchhcC-HHHHHHHHHHhcCCcccCcCHHHHhcCcc
Confidence                     0000111111111 23 67899999999999999999999999764

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors

Probab=100.00  E-value=2e-37  Score=278.61  Aligned_cols=260  Identities=12%  Similarity=0.054  Sum_probs=192.8

Q ss_pred             EEEEcCeeEEEEEEeeccCceEEEEEEe----cCCCCceEEEEecCCCCChH-HHHHHHHHhhhccc-cccccccceeee
Q 018699           42 TIEIGGKKYQIKGCAGQGGFAKVFKAYV----NGDPEDVVALKIQKPAFPWE-FYMYRQLDQRISGR-ERSSFGFAHRIH  115 (351)
Q Consensus        42 ~~~i~~~~Y~i~~~lg~G~~g~V~~a~~----~~~~~~~vaiK~~~~~~~~e-~~~~~~~~~~~~~~-~~~~~~~~~~~~  115 (351)
                      ...+..++|++.+.||+|+||.||+|.+    +..++..||+|.+....... ...+......+... .|+++......+
T Consensus        29 ~~~~~~~~~~~~~~ig~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~  108 (302)
T cd05055          29 KWEFPRNNLSFGKTLGAGAFGKVVEATAYGLSKSDAVMKVAVKMLKPTAHSSEREALMSELKIMSHLGNHENIVNLLGAC  108 (302)
T ss_pred             cccccHHHeEEcceeeccCCeeEEEEEEecCCCCCceeEEEEEecCccCChHHHHHHHHHHHHHHhccCCCCcceEEEEE
Confidence            3456678999999999999999999974    23456689999987653222 12222222233334 578888888888


Q ss_pred             cccCeeEEEEEecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeecc
Q 018699          116 LYSDYSILVCDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDH  195 (351)
Q Consensus       116 ~~~~~~~lv~e~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~  195 (351)
                      ...+..++||||+++++|.+++....  +..+++.++..++.|++.|+.|||+++++|+||+|+||+++           
T Consensus       109 ~~~~~~~lv~e~~~~~~L~~~i~~~~--~~~l~~~~~~~i~~~i~~~l~~lH~~~ivH~dlkp~Nil~~-----------  175 (302)
T cd05055         109 TIGGPILVITEYCCYGDLLNFLRRKR--ESFLTLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNVLLT-----------  175 (302)
T ss_pred             ecCCceEEEEEcCCCCcHHHHHHhCC--CCCCCHHHHHHHHHHHHHHHHHHHHCCeehhhhccceEEEc-----------
Confidence            77888999999999999999987532  23489999999999999999999999999999999999998           


Q ss_pred             CCCCCcccCCeEEeecCCccccccCCCCccccccccCCCcccceeccCCCCCccchHhHHHHHHHHHHh-CccccccccC
Q 018699          196 DRSGPWQDQGLCLVDWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQEKKPWKFQVDTYGLCAIVHMMLH-NSYMEIEKKA  274 (351)
Q Consensus       196 ~~~~~~~~~~~~l~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~-g~~p~~~~~~  274 (351)
                            .++.++|+|||.+................++..|+|||.+.+..++.++||||+||++|+|++ |..||.....
T Consensus       176 ------~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~el~t~g~~p~~~~~~  249 (302)
T cd05055         176 ------HGKIVKICDFGLARDIMNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLGSNPYPGMPV  249 (302)
T ss_pred             ------CCCeEEECCCcccccccCCCceeecCCCCcccccCCHhhhccCCCCcHhHHHHHHHHHHHHHhCCCCCcCCCCc
Confidence                  667799999998864322111111122345678999999988889999999999999999998 8999864332


Q ss_pred             CCCCceee--ecCcchhhhhHHHHHHHHHHHHhcCCCCCChHHHHHHHH
Q 018699          275 SPDGGLVY--LPKLSFKRYWKVELWKSLFTNLLNMSSGNDKEVLQNLQK  321 (351)
Q Consensus       275 ~~~~~~~~--~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~~  321 (351)
                      ........  ......+...+ +.+.+|+.+||+++|++||++.+++..
T Consensus       250 ~~~~~~~~~~~~~~~~~~~~~-~~~~~li~~cl~~~p~~Rpt~~ell~~  297 (302)
T cd05055         250 DSKFYKLIKEGYRMAQPEHAP-AEIYDIMKTCWDADPLKRPTFKQIVQL  297 (302)
T ss_pred             hHHHHHHHHcCCcCCCCCCCC-HHHHHHHHHHcCCCchhCcCHHHHHHH
Confidence            21000000  00111122223 789999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept

>cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A

Probab=100.00  E-value=1.4e-37  Score=276.64  Aligned_cols=259  Identities=12%  Similarity=0.048  Sum_probs=192.1

Q ss_pred             EcCeeEEEEEEeeccCceEEEEEEe----cCCCCceEEEEecCCCCChHHHHHHHHHhhhccccccccccceeeecccCe
Q 018699           45 IGGKKYQIKGCAGQGGFAKVFKAYV----NGDPEDVVALKIQKPAFPWEFYMYRQLDQRISGRERSSFGFAHRIHLYSDY  120 (351)
Q Consensus        45 i~~~~Y~i~~~lg~G~~g~V~~a~~----~~~~~~~vaiK~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  120 (351)
                      +..++|.+.++||+|+||.||+|..    +..++..+++|.+..........+......+....++++..........+.
T Consensus         2 ~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~   81 (280)
T cd05092           2 IKRRDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTVLQHQHIVRFYGVCTEGRP   81 (280)
T ss_pred             CChHhceeccccCCccCCeEEEeEEecCCCCCCceEEEEEecCcCCHHHHHHHHHHHHHHhcCCCCCCceEEEEEecCCc
Confidence            4567899999999999999999974    233567899998875543333333333344455677888888877777888


Q ss_pred             eEEEEEecCCCCHHHHHHHHHhh-----------CCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCc
Q 018699          121 SILVCDYLSQGTLQDAINSYVVI-----------GKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDE  189 (351)
Q Consensus       121 ~~lv~e~~~~~sL~~~l~~~~~~-----------~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~  189 (351)
                      .+++|||+++++|.+++......           ...+++..+..++.|++.|++|||++|++|+||+|+||+++     
T Consensus        82 ~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~~i~H~dlkp~nil~~-----  156 (280)
T cd05092          82 LLMVFEYMRHGDLNRFLRSHGPDAKILAGGEDVAPGQLTLGQMLAIASQIASGMVYLASLHFVHRDLATRNCLVG-----  156 (280)
T ss_pred             eEEEEecCCCCCHHHHHHhcCcchhhhcccccCCccccCHHHHHHHHHHHHHHHHHHHHCCeecccccHhhEEEc-----
Confidence            99999999999999998764210           12478899999999999999999999999999999999998     


Q ss_pred             ceeeccCCCCCcccCCeEEeecCCccccccCCCCccccccccCCCcccceeccCCCCCccchHhHHHHHHHHHHh-Cccc
Q 018699          190 LTVLDHDRSGPWQDQGLCLVDWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQEKKPWKFQVDTYGLCAIVHMMLH-NSYM  268 (351)
Q Consensus       190 ~~~~~~~~~~~~~~~~~~l~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~-g~~p  268 (351)
                                  .++.++|+|||++................+++.|+|||.+.+..++.++|||||||++|+|++ |.+|
T Consensus       157 ------------~~~~~kL~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p  224 (280)
T cd05092         157 ------------QGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDIWSFGVVLWEIFTYGKQP  224 (280)
T ss_pred             ------------CCCCEEECCCCceeEcCCCceeecCCCccccccccCHHHhccCCcCchhhHHHHHHHHHHHHcCCCCC
Confidence                        677799999998864321111111122334678999999988889999999999999999998 8888


Q ss_pred             cccccCCCCCc-eeeecCcchhhhhHHHHHHHHHHHHhcCCCCCChHHHHHHHH
Q 018699          269 EIEKKASPDGG-LVYLPKLSFKRYWKVELWKSLFTNLLNMSSGNDKEVLQNLQK  321 (351)
Q Consensus       269 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~~  321 (351)
                      |.......... .........+...+ +.+.+||.+||..||++||++.+++..
T Consensus       225 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~li~~cl~~~P~~Rp~~~~l~~~  277 (280)
T cd05092         225 WYQLSNTEAIECITQGRELERPRTCP-PEVYAIMQGCWQREPQQRMVIKDIHSR  277 (280)
T ss_pred             CccCCHHHHHHHHHcCccCCCCCCCC-HHHHHHHHHHccCChhhCCCHHHHHHH
Confidence            85433211000 00111112222233 678999999999999999999998753

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory

>cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase

Probab=100.00  E-value=5.9e-37  Score=281.61  Aligned_cols=254  Identities=21%  Similarity=0.281  Sum_probs=188.2

Q ss_pred             CeeEEEEEEeeccCceEEEEEEecCCCCceEEEEecCCCCChH---HHHHHHHHhhhccccccccccceeeecc------
Q 018699           47 GKKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFPWE---FYMYRQLDQRISGRERSSFGFAHRIHLY------  117 (351)
Q Consensus        47 ~~~Y~i~~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~~~e---~~~~~~~~~~~~~~~~~~~~~~~~~~~~------  117 (351)
                      .++|++.+.||.|+||.||+|+ +..+++.||+|.+.......   ....+++ .......+++++.....+..      
T Consensus        15 ~~~y~~~~~lg~g~~g~V~~~~-~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~-~~l~~l~h~~iv~~~~~~~~~~~~~~   92 (353)
T cd07850          15 LKRYQNLKPIGSGAQGIVCAAY-DTVTGQNVAIKKLSRPFQNVTHAKRAYREL-VLMKLVNHKNIIGLLNVFTPQKSLEE   92 (353)
T ss_pred             hcceEEEEEeccCCCEEEEEEE-ECCCCCEEEEEecCccccChhHHHHHHHHH-HHHHhcCCCCCcceeeeeccCCCccc
Confidence            4789999999999999999999 57788999999987543221   1122222 22334456677666655432      


Q ss_pred             cCeeEEEEEecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeeccCC
Q 018699          118 SDYSILVCDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDR  197 (351)
Q Consensus       118 ~~~~~lv~e~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~~  197 (351)
                      ....|+||||+ +++|.+.+..      .++...+..++.|++.|+.|||++|++|+||+|+||+++             
T Consensus        93 ~~~~~lv~e~~-~~~l~~~~~~------~l~~~~~~~~~~ql~~aL~~LH~~gi~H~dlkp~Nil~~-------------  152 (353)
T cd07850          93 FQDVYLVMELM-DANLCQVIQM------DLDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVK-------------  152 (353)
T ss_pred             cCcEEEEEecc-CCCHHHHHhh------cCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEEC-------------
Confidence            23579999999 5688888754      288889999999999999999999999999999999999             


Q ss_pred             CCCcccCCeEEeecCCccccccCCCCccccccccCCCcccceeccCCCCCccchHhHHHHHHHHHHhCccccccccCCCC
Q 018699          198 SGPWQDQGLCLVDWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQEKKPWKFQVDTYGLCAIVHMMLHNSYMEIEKKASPD  277 (351)
Q Consensus       198 ~~~~~~~~~~l~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~p~~~~~~~~~  277 (351)
                          .++.++|+|||++.....   ........++..|+|||.+.+..++.++|||||||++|+|++|..||........
T Consensus       153 ----~~~~~kL~Dfg~~~~~~~---~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~~l~~g~~pf~~~~~~~~  225 (353)
T cd07850         153 ----SDCTLKILDFGLARTAGT---SFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIRGTVLFPGTDHIDQ  225 (353)
T ss_pred             ----CCCCEEEccCccceeCCC---CCCCCCCcccccccCHHHHhCCCCCCchhhHhHHHHHHHHHHCCCCCCCCCHHHH
Confidence                778899999999865331   1112334578899999999999999999999999999999999999864321000


Q ss_pred             --------C---------------cee----------e---ecCcch-------hhhhHHHHHHHHHHHHhcCCCCCChH
Q 018699          278 --------G---------------GLV----------Y---LPKLSF-------KRYWKVELWKSLFTNLLNMSSGNDKE  314 (351)
Q Consensus       278 --------~---------------~~~----------~---~~~~~~-------~~~~~~~~~~~li~~~L~~dP~~R~s  314 (351)
                              +               .+.          .   .+....       +.... +.+++||.+||..||++||+
T Consensus       226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~li~~~L~~dP~~R~t  304 (353)
T cd07850         226 WNKIIEQLGTPSDEFMSRLQPTVRNYVENRPKYAGYSFEELFPDVLFPPDSESHNKLKA-SQARDLLSKMLVIDPEKRIS  304 (353)
T ss_pred             HHHHHHhcCCCCHHHHHHhhhhhhHHhhcCCCCCCcchhhhCcccccCcccccccccch-hHHHHHHHHHcCCChhhCcC
Confidence                    0               000          0   000000       00112 56899999999999999999


Q ss_pred             HHHHHHHHHHHHHhhC
Q 018699          315 VLQNLQKSFQDYLCSN  330 (351)
Q Consensus       315 ~~e~l~~~~~~~~~~~  330 (351)
                      +.|+|.|+|-..|...
T Consensus       305 ~~eiL~~~~~~~~~~~  320 (353)
T cd07850         305 VDDALQHPYINVWYDP  320 (353)
T ss_pred             HHHHhcChhHhhccCC
Confidence            9999999987644444

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK

>cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase

Probab=100.00  E-value=4.4e-37  Score=269.43  Aligned_cols=252  Identities=18%  Similarity=0.147  Sum_probs=197.7

Q ss_pred             eEEEEEEeeccCceEEEEEEecCCCCceEEEEecCCCCC--hHHHHHHHHHhhhccccccccccceeeeccc--CeeEEE
Q 018699           49 KYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFP--WEFYMYRQLDQRISGRERSSFGFAHRIHLYS--DYSILV  124 (351)
Q Consensus        49 ~Y~i~~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~~--~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~lv  124 (351)
                      +|.+.+.||+|++|.||+|. +..+++.|++|++.....  .....+...........++++..........  ...+++
T Consensus         1 ~~~~~~~i~~g~~~~v~~~~-~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv   79 (260)
T cd06606           1 EWTRGELLGRGSFGSVYLAL-DKDTGELMAVKSVELSGDSEEELEALEREIRILSSLQHPNIVRYYGSERDEEKNTLNIF   79 (260)
T ss_pred             CceeeeEeeecCceEEEEEE-ECCCCcEEEEEEeeccccchHHHHHHHHHHHHHHHcCCCCEeeEEEEEecCCCCeEEEE
Confidence            48899999999999999999 466789999999876653  2223333333344455577887777777666  789999


Q ss_pred             EEecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeeccCCCCCcccC
Q 018699          125 CDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSGPWQDQ  204 (351)
Q Consensus       125 ~e~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~~~~~~~~~  204 (351)
                      +||+++++|.+++...    ..+++..++.++.|++.|+.|||+.|++|+||+|+||+++                 .++
T Consensus        80 ~e~~~~~~L~~~~~~~----~~~~~~~~~~~~~~l~~~l~~lh~~~~~h~dl~p~ni~i~-----------------~~~  138 (260)
T cd06606          80 LEYVSGGSLSSLLKKF----GKLPEPVIRKYTRQILEGLAYLHSNGIVHRDIKGANILVD-----------------SDG  138 (260)
T ss_pred             EEecCCCcHHHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEEc-----------------CCC
Confidence            9999999999999873    5889999999999999999999999999999999999999                 677


Q ss_pred             CeEEeecCCccccccCCCCccccccccCCCcccceeccCCCCCccchHhHHHHHHHHHHhCccccccccCCCCCce--e-
Q 018699          205 GLCLVDWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQEKKPWKFQVDTYGLCAIVHMMLHNSYMEIEKKASPDGGL--V-  281 (351)
Q Consensus       205 ~~~l~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~p~~~~~~~~~~~~--~-  281 (351)
                      .++|+|||.+................++..|+|||...+..++.++|+||||+++|+|++|..||...........  . 
T Consensus       139 ~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~  218 (260)
T cd06606         139 VVKLADFGCAKRLGDIETGEGTGSVRGTPYWMAPEVIRGEEYGRAADIWSLGCTVIEMATGKPPWSELGNPMAALYKIGS  218 (260)
T ss_pred             CEEEcccccEEecccccccccccCCCCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCchHHHHHhccc
Confidence            8999999988654322111113345678899999999888889999999999999999999999875441100000  0 


Q ss_pred             eecCcchhhhhHHHHHHHHHHHHhcCCCCCChHHHHHHHHHH
Q 018699          282 YLPKLSFKRYWKVELWKSLFTNLLNMSSGNDKEVLQNLQKSF  323 (351)
Q Consensus       282 ~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~~~~  323 (351)
                      ......++..++ ..+.++|.+||..||++||++.+++.|||
T Consensus       219 ~~~~~~~~~~~~-~~l~~~i~~~l~~~p~~Rp~~~~ll~~~~  259 (260)
T cd06606         219 SGEPPEIPEHLS-EEAKDFLRKCLRRDPKKRPTADELLQHPF  259 (260)
T ss_pred             cCCCcCCCcccC-HHHHHHHHHhCcCChhhCCCHHHHhhCCC
Confidence            112233444445 88999999999999999999999999986

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK

>cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6

Probab=100.00  E-value=7.4e-38  Score=280.80  Aligned_cols=252  Identities=17%  Similarity=0.153  Sum_probs=192.7

Q ss_pred             eeEEEEEEeeccCceEEEEEEecCCCCceEEEEecCCCCChHHHHHHHHHhhhccccccccccceeeecccCeeEEEEEe
Q 018699           48 KKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFPWEFYMYRQLDQRISGRERSSFGFAHRIHLYSDYSILVCDY  127 (351)
Q Consensus        48 ~~Y~i~~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~  127 (351)
                      ..|.....||.|+||.||+|. +..+++.||+|.+..........+...........|+++......+..++..++|+||
T Consensus        21 ~~~~~~~~ig~g~~g~v~~~~-~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~iv~e~   99 (297)
T cd06659          21 SLLENYIKIGEGSTGIVCIAR-EKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHQNVVEMYKSYLVGEELWVLMEF   99 (297)
T ss_pred             hhHHhhhhcCCCCceeEEEEE-EcCCCCEEEEEEEEecccchHHHHHHHHHHHHhCCCCchhhhhhheeeCCeEEEEEec
Confidence            345567789999999999999 5677899999998643322222222222334455678888888877788899999999


Q ss_pred             cCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeeccCCCCCcccCCeE
Q 018699          128 LSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSGPWQDQGLC  207 (351)
Q Consensus       128 ~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~~~~~~~~~~~~  207 (351)
                      +++++|..++..     ..+++..++.++.|++.|+.+||++|++|+||+|+||+++                 .++.++
T Consensus       100 ~~~~~L~~~~~~-----~~~~~~~~~~~~~qi~~~L~~LH~~~ivH~dl~p~Nill~-----------------~~~~~k  157 (297)
T cd06659         100 LQGGALTDIVSQ-----TRLNEEQIATVCESVLQALCYLHSQGVIHRDIKSDSILLT-----------------LDGRVK  157 (297)
T ss_pred             CCCCCHHHHHhh-----cCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHeEEc-----------------cCCcEE
Confidence            999999987754     4688999999999999999999999999999999999998                 778899


Q ss_pred             EeecCCccccccCCCCccccccccCCCcccceeccCCCCCccchHhHHHHHHHHHHhCccccccccCCCCCcee---eec
Q 018699          208 LVDWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQEKKPWKFQVDTYGLCAIVHMMLHNSYMEIEKKASPDGGLV---YLP  284 (351)
Q Consensus       208 l~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~p~~~~~~~~~~~~~---~~~  284 (351)
                      |+|||++.....  .........++..|+|||.+.+..++.++|+||+||++|+|++|..||............   ...
T Consensus       158 L~dfg~~~~~~~--~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~  235 (297)
T cd06659         158 LSDFGFCAQISK--DVPKRKSLVGTPYWMAPEVISRTPYGTEVDIWSLGIMVIEMVDGEPPYFSDSPVQAMKRLRDSPPP  235 (297)
T ss_pred             EeechhHhhccc--ccccccceecCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhccCCC
Confidence            999998754321  111223456889999999998888899999999999999999999998644322100000   001


Q ss_pred             CcchhhhhHHHHHHHHHHHHhcCCCCCChHHHHHHHHHHHH
Q 018699          285 KLSFKRYWKVELWKSLFTNLLNMSSGNDKEVLQNLQKSFQD  325 (351)
Q Consensus       285 ~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~~~~~~  325 (351)
                      .......++ ..+.++|.+||+.+|++||++.+++.|+|..
T Consensus       236 ~~~~~~~~~-~~l~~~i~~~l~~~P~~Rps~~~ll~~~~~~  275 (297)
T cd06659         236 KLKNAHKIS-PVLRDFLERMLTREPQERATAQELLDHPFLL  275 (297)
T ss_pred             CccccCCCC-HHHHHHHHHHhcCCcccCcCHHHHhhChhhc
Confidence            111111223 6789999999999999999999999998754

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i

>cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2

Probab=100.00  E-value=3.2e-37  Score=282.20  Aligned_cols=261  Identities=14%  Similarity=0.116  Sum_probs=187.2

Q ss_pred             EEEcCeeEEEEEEeeccCceEEEEEEe----cCCCCceEEEEecCCCCChH--HHHHHHHHhhhccccccccccceeeec
Q 018699           43 IEIGGKKYQIKGCAGQGGFAKVFKAYV----NGDPEDVVALKIQKPAFPWE--FYMYRQLDQRISGRERSSFGFAHRIHL  116 (351)
Q Consensus        43 ~~i~~~~Y~i~~~lg~G~~g~V~~a~~----~~~~~~~vaiK~~~~~~~~e--~~~~~~~~~~~~~~~~~~~~~~~~~~~  116 (351)
                      +.+..++|++.+.||.|+||+||+|.+    +..+++.||||++......+  ....+++........|++++.......
T Consensus         2 ~~~~~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~   81 (343)
T cd05103           2 WEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACT   81 (343)
T ss_pred             cccchhHhcccccccCCccceEEEEeeccCCccccceeEEEEEeccCCChHHHHHHHHHHHHHHhccCCccHhhhcceee
Confidence            345668999999999999999999985    23457899999987543221  122333332222234567666665443


Q ss_pred             -ccCeeEEEEEecCCCCHHHHHHHHHh-----------------------------------------------------
Q 018699          117 -YSDYSILVCDYLSQGTLQDAINSYVV-----------------------------------------------------  142 (351)
Q Consensus       117 -~~~~~~lv~e~~~~~sL~~~l~~~~~-----------------------------------------------------  142 (351)
                       .+...++||||+++|+|.+++.....                                                     
T Consensus        82 ~~~~~~~lv~ey~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  161 (343)
T cd05103          82 KPGGPLMVIVEFCKFGNLSNYLRSKRGEFVPYKTKDARFRQGKSGYGDISEDLKRRLDSITSSQSSASSGFVEEKSLSDV  161 (343)
T ss_pred             cCCCceEEEEeccCCCcHHHHHHhcCCccccccccccccccccccccchhhhhhhhccccccccccccccccCCCccccc
Confidence             35577899999999999999875310                                                     


Q ss_pred             ----------hCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeeccCCCCCcccCCeEEeecC
Q 018699          143 ----------IGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSGPWQDQGLCLVDWG  212 (351)
Q Consensus       143 ----------~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~~~~~~~~~~~~l~Dfg  212 (351)
                                ....++...+..++.|++.|++|||++||+|+||||+||+++                 .++.++|+|||
T Consensus       162 ~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~H~dikp~Nil~~-----------------~~~~~kl~dfg  224 (343)
T cd05103         162 EEEEAEQEDLYKKVLTLEDLICYSFQVAKGMEFLASRKCIHRDLAARNILLS-----------------ENNVVKICDFG  224 (343)
T ss_pred             hhhhhhhhhhhhccCCHHHHHHHHHHHHHHHHHHHhCCeecCCCccCeEEEc-----------------CCCcEEEEecc
Confidence                      012367778889999999999999999999999999999999                 67789999999


Q ss_pred             CccccccCCCCccccccccCCCcccceeccCCCCCccchHhHHHHHHHHHHh-CccccccccCCCC--CceeeecCcchh
Q 018699          213 RGIDLHLFPDNMEFEGDCRTSGFRCIEMQEKKPWKFQVDTYGLCAIVHMMLH-NSYMEIEKKASPD--GGLVYLPKLSFK  289 (351)
Q Consensus       213 ~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~-g~~p~~~~~~~~~--~~~~~~~~~~~~  289 (351)
                      ++................++..|+|||.+.+..++.++||||||+++|+|++ |..||........  ...........+
T Consensus       225 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~  304 (343)
T cd05103         225 LARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAP  304 (343)
T ss_pred             cccccccCcchhhcCCCCCCcceECcHHhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCccccHHHHHHHhccCCCCCC
Confidence            8865322111111222335667999999988889999999999999999996 8888754322100  000001111222


Q ss_pred             hhhHHHHHHHHHHHHhcCCCCCChHHHHHHHH
Q 018699          290 RYWKVELWKSLFTNLLNMSSGNDKEVLQNLQK  321 (351)
Q Consensus       290 ~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~~  321 (351)
                      ...+ +.+.+++.+||+.||.+||++.+++.+
T Consensus       305 ~~~~-~~~~~~~~~cl~~~p~~Rps~~eil~~  335 (343)
T cd05103         305 DYTT-PEMYQTMLDCWHGEPSQRPTFSELVEH  335 (343)
T ss_pred             CCCC-HHHHHHHHHHccCChhhCcCHHHHHHH
Confidence            2233 678999999999999999999999987

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp

>cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase

Probab=100.00  E-value=1.4e-37  Score=274.19  Aligned_cols=251  Identities=17%  Similarity=0.175  Sum_probs=195.9

Q ss_pred             eeEEEEEEeeccCceEEEEEEecCCCCceEEEEecCCCCChH--HHHHHHHHhhhccccccccccceeeecccCeeEEEE
Q 018699           48 KKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFPWE--FYMYRQLDQRISGRERSSFGFAHRIHLYSDYSILVC  125 (351)
Q Consensus        48 ~~Y~i~~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~~~e--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~  125 (351)
                      ++|++.+.||.|++|.||+|. +..+++.||+|.+......+  .....++ .......++++..........+..++++
T Consensus         1 ~~~~~~~~ig~g~~~~v~~~~-~~~~~~~~~ik~~~~~~~~~~~~~~~~e~-~~l~~~~~~~i~~~~~~~~~~~~~~lv~   78 (265)
T cd06605           1 DDLEYLGELGAGNSGVVSKVL-HRPTGKIMAVKTIRLEINEAIQKQILREL-DILHKCNSPYIVGFYGAFYNNGDISICM   78 (265)
T ss_pred             CcchHHHHhcCCCCeEEEEEE-EcCCCcEEEEEEEecccChHHHHHHHHHH-HHHHHCCCCchhhhheeeecCCEEEEEE
Confidence            368899999999999999999 56778999999987654322  2222322 2233345778888777777789999999


Q ss_pred             EecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHH-CCceecCCCCCcEEEeecCCcceeeccCCCCCcccC
Q 018699          126 DYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHD-VGIIHGDFKPDNLLIRYARDELTVLDHDRSGPWQDQ  204 (351)
Q Consensus       126 e~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~-~~i~H~dl~p~Nill~~~~~~~~~~~~~~~~~~~~~  204 (351)
                      ||+++++|.+++...   ...+++..+..++.|++.|+++||+ .|++|+||+|+||+++                 .++
T Consensus        79 e~~~~~~L~~~~~~~---~~~~~~~~~~~~~~~l~~~l~~lH~~~~i~H~dl~~~ni~~~-----------------~~~  138 (265)
T cd06605          79 EYMDGGSLDKILKEV---QGRIPERILGKIAVAVLKGLTYLHEKHKIIHRDVKPSNILVN-----------------SRG  138 (265)
T ss_pred             EecCCCcHHHHHHHc---cCCCCHHHHHHHHHHHHHHHHHHcCCCCeecCCCCHHHEEEC-----------------CCC
Confidence            999999999999874   2678999999999999999999999 9999999999999999                 677


Q ss_pred             CeEEeecCCccccccCCCCccccccccCCCcccceeccCCCCCccchHhHHHHHHHHHHhCccccccccCCCCCc-----
Q 018699          205 GLCLVDWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQEKKPWKFQVDTYGLCAIVHMMLHNSYMEIEKKASPDGG-----  279 (351)
Q Consensus       205 ~~~l~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~p~~~~~~~~~~~-----  279 (351)
                      .++|+|||.+......    ......++..|+|||.+.+..++.++|+||||+++|+|++|..||..........     
T Consensus       139 ~~~l~d~g~~~~~~~~----~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~  214 (265)
T cd06605         139 QIKLCDFGVSGQLVNS----LAKTFVGTSSYMAPERIQGNDYSVKSDIWSLGLSLIELATGRFPYPPENDPPDGIFELLQ  214 (265)
T ss_pred             CEEEeecccchhhHHH----HhhcccCChhccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCccccccccHHHHHH
Confidence            8999999987543211    1112567889999999988889999999999999999999999987543211100     


Q ss_pred             -eeeecCcchhhh-hHHHHHHHHHHHHhcCCCCCChHHHHHHHHHHHH
Q 018699          280 -LVYLPKLSFKRY-WKVELWKSLFTNLLNMSSGNDKEVLQNLQKSFQD  325 (351)
Q Consensus       280 -~~~~~~~~~~~~-~~~~~~~~li~~~L~~dP~~R~s~~e~l~~~~~~  325 (351)
                       .........+.. ++ ..++++|.+||..||++||++.+++.|||..
T Consensus       215 ~~~~~~~~~~~~~~~~-~~~~~li~~~l~~~p~~Rpt~~~ll~~~~~~  261 (265)
T cd06605         215 YIVNEPPPRLPSGKFS-PDFQDFVNLCLIKDPRERPSYKELLEHPFIK  261 (265)
T ss_pred             HHhcCCCCCCChhhcC-HHHHHHHHHHcCCCchhCcCHHHHhhCchhh
Confidence             011122222222 44 7899999999999999999999999998754

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity

>cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk

Probab=100.00  E-value=7e-38  Score=275.55  Aligned_cols=251  Identities=11%  Similarity=0.084  Sum_probs=191.8

Q ss_pred             CeeEEEEEEeeccCceEEEEEEecCCCCceEEEEecCCCCChHHHHHHHHHhhhccccccccccceeeecccCeeEEEEE
Q 018699           47 GKKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFPWEFYMYRQLDQRISGRERSSFGFAHRIHLYSDYSILVCD  126 (351)
Q Consensus        47 ~~~Y~i~~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e  126 (351)
                      ..+|++.++||.|++|+||+|.+ .. ++.+++|++..........+...........++++..........+..++|||
T Consensus         5 ~~~y~~~~~ig~g~~~~vy~~~~-~~-~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e   82 (261)
T cd05148           5 REEFTLERKLGSGYFGEVWEGLW-KN-RVRVAIKILKSDDLLKQQDFQKEVQALKRLRHKHLISLFAVCSVGEPVYIITE   82 (261)
T ss_pred             HHHHHHhhhhccCCCccEEEeEe-cC-CCcEEEEeccccchhhHHHHHHHHHHHhcCCCcchhheeeeEecCCCeEEEEe
Confidence            35799999999999999999995 34 78999999886654333333322333445567788888887777888999999


Q ss_pred             ecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeeccCCCCCcccCCe
Q 018699          127 YLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSGPWQDQGL  206 (351)
Q Consensus       127 ~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~~~~~~~~~~~  206 (351)
                      |+++++|.+++....  +..+++..+..++.|++.|+.|||++|++|+||+|+||+++                 .++.+
T Consensus        83 ~~~~~~L~~~~~~~~--~~~~~~~~~~~~~~~i~~al~~lH~~~i~h~dl~~~nilv~-----------------~~~~~  143 (261)
T cd05148          83 LMEKGSLLAFLRSPE--GQVLPVASLIDMACQVAEGMAYLEEQNSIHRDLAARNILVG-----------------EDLVC  143 (261)
T ss_pred             ecccCCHHHHHhcCC--CCCCCHHHHHHHHHHHHHHHHHHHHCCeeccccCcceEEEc-----------------CCceE
Confidence            999999999997642  45789999999999999999999999999999999999999                 67789


Q ss_pred             EEeecCCccccccCCCCccccccccCCCcccceeccCCCCCccchHhHHHHHHHHHHh-CccccccccCCCCCcee-eec
Q 018699          207 CLVDWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQEKKPWKFQVDTYGLCAIVHMMLH-NSYMEIEKKASPDGGLV-YLP  284 (351)
Q Consensus       207 ~l~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~-g~~p~~~~~~~~~~~~~-~~~  284 (351)
                      +|+|||.+.....  .........++..|+|||.+.+..++.++||||||+++|+|++ |..||............ ...
T Consensus       144 kl~d~g~~~~~~~--~~~~~~~~~~~~~~~~PE~~~~~~~~~~~DiwslG~~l~~l~~~g~~p~~~~~~~~~~~~~~~~~  221 (261)
T cd05148         144 KVADFGLARLIKE--DVYLSSDKKIPYKWTAPEAASHGTFSTKSDVWSFGILLYEMFTYGQVPYPGMNNHEVYDQITAGY  221 (261)
T ss_pred             EEccccchhhcCC--ccccccCCCCceEecCHHHHccCCCCchhhHHHHHHHHHHHHcCCCCCCCcCCHHHHHHHHHhCC
Confidence            9999998864321  1111123345667999999988888999999999999999998 88888654322110000 011


Q ss_pred             CcchhhhhHHHHHHHHHHHHhcCCCCCChHHHHHHHH
Q 018699          285 KLSFKRYWKVELWKSLFTNLLNMSSGNDKEVLQNLQK  321 (351)
Q Consensus       285 ~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~~  321 (351)
                      ..+.+...+ +.+.++|.+||+.||.+||++.+++..
T Consensus       222 ~~~~~~~~~-~~~~~~i~~~l~~~p~~Rpt~~~l~~~  257 (261)
T cd05148         222 RMPCPAKCP-QEIYKIMLECWAAEPEDRPSFKALREE  257 (261)
T ss_pred             cCCCCCCCC-HHHHHHHHHHcCCCchhCcCHHHHHHH
Confidence            112222333 788999999999999999999998764

Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom

>cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7

Probab=100.00  E-value=1.1e-36  Score=273.19  Aligned_cols=276  Identities=14%  Similarity=0.168  Sum_probs=202.0

Q ss_pred             eEEEEcCeeEEEEEEeeccCceEEEEEEecCCCCceEEEEecCCCCCh--HHHHHHHHHhhhccccccccccceeeeccc
Q 018699           41 KTIEIGGKKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFPW--EFYMYRQLDQRISGRERSSFGFAHRIHLYS  118 (351)
Q Consensus        41 ~~~~i~~~~Y~i~~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~~~--e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  118 (351)
                      ....+..+.|++.+.||+|++|.||+|.+ ..+++.||||.+......  ....+.++........+++++.....+...
T Consensus         8 ~~~~~~~~~~~~~~~lg~g~~~~v~~~~~-~~~~~~~avK~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~   86 (296)
T cd06618           8 QKYPADLNDLENLGEIGSGTCGQVYKMRF-KKTGHVMAVKQMRRTGNKEENKRILMDLDVVLKSHDCPYIVKCYGYFITD   86 (296)
T ss_pred             eeccCCcchheeeeEeeccCCeEEEEEEE-CCCCeEEEEEEEeccCChHHHHHHHHHHHHHHhccCCCchHhhheeeecC
Confidence            34456678899999999999999999994 566899999998754322  222333333222333477888888888888


Q ss_pred             CeeEEEEEecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHH-CCceecCCCCCcEEEeecCCcceeeccCC
Q 018699          119 DYSILVCDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHD-VGIIHGDFKPDNLLIRYARDELTVLDHDR  197 (351)
Q Consensus       119 ~~~~lv~e~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~-~~i~H~dl~p~Nill~~~~~~~~~~~~~~  197 (351)
                      ...|++|||+ +++|.+++...   +..+++..+..++.|++.|++|||+ .||+|+||+|+||+++             
T Consensus        87 ~~~~~v~e~~-~~~l~~l~~~~---~~~l~~~~~~~i~~~i~~~l~~lH~~~~i~H~dl~p~nill~-------------  149 (296)
T cd06618          87 SDVFICMELM-STCLDKLLKRI---QGPIPEDILGKMTVAIVKALHYLKEKHGVIHRDVKPSNILLD-------------  149 (296)
T ss_pred             CeEEEEeecc-CcCHHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHhhCCEecCCCcHHHEEEc-------------
Confidence            8999999998 56888877664   4578999999999999999999997 5999999999999998             


Q ss_pred             CCCcccCCeEEeecCCccccccCCCCccccccccCCCcccceeccCCC----CCccchHhHHHHHHHHHHhCcccccccc
Q 018699          198 SGPWQDQGLCLVDWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQEKKP----WKFQVDTYGLCAIVHMMLHNSYMEIEKK  273 (351)
Q Consensus       198 ~~~~~~~~~~l~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~----~~~~~DiwslG~il~~l~~g~~p~~~~~  273 (351)
                          .++.++|+|||++.....   ........++..|+|||.+.+..    ++.++||||||+++|+|++|..||....
T Consensus       150 ----~~~~~kL~dfg~~~~~~~---~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~  222 (296)
T cd06618         150 ----ASGNVKLCDFGISGRLVD---SKAKTRSAGCAAYMAPERIDPPDPNPKYDIRADVWSLGISLVELATGQFPYKNCK  222 (296)
T ss_pred             ----CCCCEEECccccchhccC---CCcccCCCCCccccCHhhcCCCCCccccccchhHHHHHHHHHHHHhCCCCCCcch
Confidence                677899999998854321   11222335678899999986543    7889999999999999999999986422


Q ss_pred             CCCC-C-ceeee--cCcchhhhhHHHHHHHHHHHHhcCCCCCChHHHHHHHHHH-HHHHhhChHHHHHHHHHHH
Q 018699          274 ASPD-G-GLVYL--PKLSFKRYWKVELWKSLFTNLLNMSSGNDKEVLQNLQKSF-QDYLCSNPQLLKNLKELLA  342 (351)
Q Consensus       274 ~~~~-~-~~~~~--~~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~~~~-~~~~~~~~~~~~~~~~~~~  342 (351)
                      .... . .....  +..+....++ +.+.+||.+||..||++||++.++++|+| ..+..+..+.-.-+.++|+
T Consensus       223 ~~~~~~~~~~~~~~~~~~~~~~~~-~~l~~li~~~l~~~p~~Rp~~~~il~~~~~~~~~~~~~~~~~~~~~~~~  295 (296)
T cd06618         223 TEFEVLTKILQEEPPSLPPNEGFS-PDFCSFVDLCLTKDHRKRPKYRELLQHPFIRRYETAEVDVAGWFQDVMA  295 (296)
T ss_pred             hHHHHHHHHhcCCCCCCCCCCCCC-HHHHHHHHHHccCChhhCCCHHHHhcChhhhccchhHHHHHHHHHHHhh
Confidence            1100 0 00000  1111111123 78999999999999999999999999886 3344444445555555543

Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it

>cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6

Probab=100.00  E-value=5.3e-37  Score=277.73  Aligned_cols=255  Identities=17%  Similarity=0.162  Sum_probs=179.1

Q ss_pred             EEEeeccCceEEEEEEec-CCCCceEEEEecCCCCChHHHHHHHHHhhhccccccccccceeeec--ccCeeEEEEEecC
Q 018699           53 KGCAGQGGFAKVFKAYVN-GDPEDVVALKIQKPAFPWEFYMYRQLDQRISGRERSSFGFAHRIHL--YSDYSILVCDYLS  129 (351)
Q Consensus        53 ~~~lg~G~~g~V~~a~~~-~~~~~~vaiK~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~lv~e~~~  129 (351)
                      ..+||+|+||+||+|++. ..++..||+|.+...... ....++ ...+....|++++....++.  .+...++|+||+ 
T Consensus         6 g~~lG~G~~g~Vy~~~~~~~~~~~~~a~k~~~~~~~~-~~~~~E-~~~l~~l~h~niv~~~~~~~~~~~~~~~lv~e~~-   82 (317)
T cd07867           6 GCKVGRGTYGHVYKAKRKDGKDEKEYALKQIEGTGIS-MSACRE-IALLRELKHPNVIALQKVFLSHSDRKVWLLFDYA-   82 (317)
T ss_pred             ceEeccCCCeeEEEEEecCCCccceEEEEEecCCCCc-HHHHHH-HHHHHhCCCCCeeeEEEEEeccCCCeEEEEEeee-
Confidence            368999999999999952 345688999988754322 112122 22233445677777666553  356789999999 


Q ss_pred             CCCHHHHHHHHHh-----hCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeeccCCCCCcccC
Q 018699          130 QGTLQDAINSYVV-----IGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSGPWQDQ  204 (351)
Q Consensus       130 ~~sL~~~l~~~~~-----~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~~~~~~~~~  204 (351)
                      +++|.+++.....     ....+++..++.++.||+.||.|||++||+|+||||+||++..++.             .++
T Consensus        83 ~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~ivH~Dlkp~Nil~~~~~~-------------~~~  149 (317)
T cd07867          83 EHDLWHIIKFHRASKANKKPMQLPRSMVKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEGP-------------ERG  149 (317)
T ss_pred             CCcHHHHHHhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHHhCCEEcCCCCHHHEEEccCCC-------------CCC
Confidence            5688887754211     1235889999999999999999999999999999999999964322             567


Q ss_pred             CeEEeecCCccccccCCC-CccccccccCCCcccceeccC-CCCCccchHhHHHHHHHHHHhCccccccccCCCCCcee-
Q 018699          205 GLCLVDWGRGIDLHLFPD-NMEFEGDCRTSGFRCIEMQEK-KPWKFQVDTYGLCAIVHMMLHNSYMEIEKKASPDGGLV-  281 (351)
Q Consensus       205 ~~~l~Dfg~a~~~~~~~~-~~~~~~~~g~~~y~aPE~~~~-~~~~~~~DiwslG~il~~l~~g~~p~~~~~~~~~~~~~-  281 (351)
                      .++|+|||++........ ........+|+.|+|||.+.+ ..++.++|||||||++|+|++|.+||............ 
T Consensus       150 ~~kl~DfG~a~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~el~tg~~~f~~~~~~~~~~~~~  229 (317)
T cd07867         150 RVKIADMGFARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPF  229 (317)
T ss_pred             cEEEeeccceeccCCCcccccccCcceecccccCcHHhcCCCccCcHHHHHhHHHHHHHHHhCCCCcccccccccccccc
Confidence            899999999865432111 112334567899999999876 45789999999999999999999998643321110000 


Q ss_pred             -------------------e-----ec---------------Ccchhhh------hHHHHHHHHHHHHhcCCCCCChHHH
Q 018699          282 -------------------Y-----LP---------------KLSFKRY------WKVELWKSLFTNLLNMSSGNDKEVL  316 (351)
Q Consensus       282 -------------------~-----~~---------------~~~~~~~------~~~~~~~~li~~~L~~dP~~R~s~~  316 (351)
                                         +     .+               .......      .....+.+||.+||..||.+|||+.
T Consensus       230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dP~~R~t~~  309 (317)
T cd07867         230 HHDQLDRIFSVMGFPADKDWEDIRKMPEYPTLQKDFRRTTYANSSLIKYMEKHKVKPDSKVFLLLQKLLTMDPTKRITSE  309 (317)
T ss_pred             cHHHHHHHHHhcCCCChhhhhhhhhcccchhhhhhhcccccCCchhhhhhhcccCCCChHHHHHHHHHhccCcccccCHH
Confidence                               0     00               0000000      0014578899999999999999999


Q ss_pred             HHHHHHH
Q 018699          317 QNLQKSF  323 (351)
Q Consensus       317 e~l~~~~  323 (351)
                      |+|.|||
T Consensus       310 e~l~hp~  316 (317)
T cd07867         310 QALQDPY  316 (317)
T ss_pred             HHhcCCC
Confidence            9999986

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as

>cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases

Probab=100.00  E-value=3.4e-37  Score=275.01  Aligned_cols=252  Identities=19%  Similarity=0.208  Sum_probs=188.7

Q ss_pred             eeEEEEEEeeccCceEEEEEEecCCCCceEEEEecCCCCChH--HHHHHHHHhhhccccccccccceeeecccCeeEEEE
Q 018699           48 KKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFPWE--FYMYRQLDQRISGRERSSFGFAHRIHLYSDYSILVC  125 (351)
Q Consensus        48 ~~Y~i~~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~~~e--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~  125 (351)
                      ++|++.+.||+|++|.||+|. +..+++.||+|.+......+  ...+...........++++.....+...++..++||
T Consensus         1 ~~y~~~~~i~~g~~~~v~~~~-~~~~~~~v~vK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~   79 (288)
T cd07833           1 NKYEVLGVVGEGAYGVVLKCR-NKATGEIVAIKKFKESEDDEDVKKTALREVKVLRQLRHENIVNLKEAFRRKGRLYLVF   79 (288)
T ss_pred             CceeEEEEecccCCeeEEEEE-eCCCCcEEEEehhhhhcccccchhHHHHHHHHHHhcCCCCeeehhheEEECCEEEEEE
Confidence            479999999999999999999 56678999999986532211  111222222333444778888888887788999999


Q ss_pred             EecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeeccCCCCCcccCC
Q 018699          126 DYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSGPWQDQG  205 (351)
Q Consensus       126 e~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~~~~~~~~~~  205 (351)
                      ||++++.+..+...    ...+++..++.++.|++.|+.|||++|++|+||+|+||+++                 .++.
T Consensus        80 e~~~~~~l~~~~~~----~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~~~ni~~~-----------------~~~~  138 (288)
T cd07833          80 EYVERTLLELLEAS----PGGLPPDAVRSYIWQLLQAIAYCHSHNIIHRDIKPENILVS-----------------ESGV  138 (288)
T ss_pred             ecCCCCHHHHHHhc----CCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEEC-----------------CCCC
Confidence            99987666655544    45689999999999999999999999999999999999999                 6788


Q ss_pred             eEEeecCCccccccCCCCccccccccCCCcccceeccCC-CCCccchHhHHHHHHHHHHhCccccccccCCC--------
Q 018699          206 LCLVDWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQEKK-PWKFQVDTYGLCAIVHMMLHNSYMEIEKKASP--------  276 (351)
Q Consensus       206 ~~l~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~-~~~~~~DiwslG~il~~l~~g~~p~~~~~~~~--------  276 (351)
                      ++|+|||.+........ .......++..|+|||.+.+. .++.++|+||||+++|+|++|..||.......        
T Consensus       139 ~kl~d~g~~~~~~~~~~-~~~~~~~~~~~~~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~  217 (288)
T cd07833         139 LKLCDFGFARALRARPA-SPLTDYVATRWYRAPELLVGDTNYGKPVDVWAIGCIMAELLDGEPLFPGDSDIDQLYLIQKC  217 (288)
T ss_pred             EEEEeeecccccCCCcc-ccccCcccccCCcCCchhcCCCCcCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHH
Confidence            99999998865432211 123345678899999999877 78899999999999999999998886432100        


Q ss_pred             --------------CCcee--eecCc--------chhhhhHHHHHHHHHHHHhcCCCCCChHHHHHHHHHH
Q 018699          277 --------------DGGLV--YLPKL--------SFKRYWKVELWKSLFTNLLNMSSGNDKEVLQNLQKSF  323 (351)
Q Consensus       277 --------------~~~~~--~~~~~--------~~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~~~~  323 (351)
                                    ...+.  ..+..        ..+...+ ..+++||.+||+.+|++||++.+++.|+|
T Consensus       218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~li~~~l~~~p~~Rps~~~il~~~~  287 (288)
T cd07833         218 LGPLPPSHQELFSSNPRFAGVAFPEPSQPESLERRYPGKVS-SPALDFLKACLRMDPKERLTCDELLQHPY  287 (288)
T ss_pred             hCCCCHHHhhhcccCccccccccCCCCCcHHHHHhcCCccc-hHHHHHHHHHhccCchhcccHHHHhcCCC
Confidence                          00000  00000        0111123 77999999999999999999999999875

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning

>cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase

Probab=100.00  E-value=8.4e-37  Score=273.14  Aligned_cols=252  Identities=19%  Similarity=0.226  Sum_probs=187.1

Q ss_pred             CeeEEEEEEeeccCceEEEEEEecCCCCceEEEEecCCCCChH--HHHHHHHHhhhccccccccccceeeecccCeeEEE
Q 018699           47 GKKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFPWE--FYMYRQLDQRISGRERSSFGFAHRIHLYSDYSILV  124 (351)
Q Consensus        47 ~~~Y~i~~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~~~e--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv  124 (351)
                      .++|++.+.||+|+||.||+|. +..+++.||+|.+.......  ....+++ .......++++.........++..|+|
T Consensus         4 ~~~y~~~~~ig~g~~~~v~~~~-~~~~~~~~~iK~~~~~~~~~~~~~~~~e~-~~l~~l~h~ni~~~~~~~~~~~~~~lv   81 (291)
T cd07870           4 ATSYLNLEKLGEGSYATVYKGI-SRINGQLVALKVISMKTEEGVPFTAIREA-SLLKGLKHANIVLLHDIIHTKETLTFV   81 (291)
T ss_pred             cceeEEEEEEEecCCEEEEEEE-EcCCCcEEEEEEecccCcCCCcHHHHHHH-HHHHhcCCCCEeEEEEEEecCCeEEEE
Confidence            3689999999999999999999 56778899999986432211  1222222 233345677888888888888899999


Q ss_pred             EEecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeeccCCCCCcccC
Q 018699          125 CDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSGPWQDQ  204 (351)
Q Consensus       125 ~e~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~~~~~~~~~  204 (351)
                      +||+ +++|.+++...   ...+++..+..++.|++.||.|||+.||+|+||+|+||+++                 .++
T Consensus        82 ~e~~-~~~l~~~~~~~---~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dlkp~Nil~~-----------------~~~  140 (291)
T cd07870          82 FEYM-HTDLAQYMIQH---PGGLHPYNVRLFMFQLLRGLAYIHGQHILHRDLKPQNLLIS-----------------YLG  140 (291)
T ss_pred             Eecc-cCCHHHHHHhC---CCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChHHEEEc-----------------CCC
Confidence            9999 57887776543   34678888899999999999999999999999999999998                 677


Q ss_pred             CeEEeecCCccccccCCCCccccccccCCCcccceeccCC-CCCccchHhHHHHHHHHHHhCccccccccCCCC------
Q 018699          205 GLCLVDWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQEKK-PWKFQVDTYGLCAIVHMMLHNSYMEIEKKASPD------  277 (351)
Q Consensus       205 ~~~l~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~-~~~~~~DiwslG~il~~l~~g~~p~~~~~~~~~------  277 (351)
                      .++|+|||++.....  .........+++.|+|||.+.+. .++.++|||||||++|+|++|..||........      
T Consensus       141 ~~~l~Dfg~~~~~~~--~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~f~~~~~~~~~~~~~~  218 (291)
T cd07870         141 ELKLADFGLARAKSI--PSQTYSSEVVTLWYRPPDVLLGATDYSSALDIWGAGCIFIEMLQGQPAFPGVSDVFEQLEKIW  218 (291)
T ss_pred             cEEEeccccccccCC--CCCCCCCccccccccCCceeecCCCCCcHHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHHHH
Confidence            899999998864321  11222334568899999998654 578899999999999999999999864321000      


Q ss_pred             -----------------Cce-----eeecCcchhhhhH----HHHHHHHHHHHhcCCCCCChHHHHHHHHHH
Q 018699          278 -----------------GGL-----VYLPKLSFKRYWK----VELWKSLFTNLLNMSSGNDKEVLQNLQKSF  323 (351)
Q Consensus       278 -----------------~~~-----~~~~~~~~~~~~~----~~~~~~li~~~L~~dP~~R~s~~e~l~~~~  323 (351)
                                       ..+     ...........|.    ...+.+++.+||+.||.+|||+.|++.|+|
T Consensus       219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~t~~~~l~h~~  290 (291)
T cd07870         219 TVLGVPTEDTWPGVSKLPNYKPEWFLPCKPQQLRVVWKRLSRPPKAEDLASQMLMMFPKDRISAQDALLHPY  290 (291)
T ss_pred             HHcCCCChhhhhhhhhcccccchhccccCCcchhhhccccCCChHHHHHHHHHhCcCcccCcCHHHHhcCCC
Confidence                             000     0000111111111    167889999999999999999999999986

Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess

>cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases

Probab=100.00  E-value=6.3e-37  Score=277.00  Aligned_cols=258  Identities=17%  Similarity=0.181  Sum_probs=187.7

Q ss_pred             eEEEEEEeeccCceEEEEEEecCC--CCceEEEEecCCCC---Ch-HHHHHHHHHhhhccccccccccceeeeccc--Ce
Q 018699           49 KYQIKGCAGQGGFAKVFKAYVNGD--PEDVVALKIQKPAF---PW-EFYMYRQLDQRISGRERSSFGFAHRIHLYS--DY  120 (351)
Q Consensus        49 ~Y~i~~~lg~G~~g~V~~a~~~~~--~~~~vaiK~~~~~~---~~-e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~  120 (351)
                      +|++.++||+|++|.||+|.+ ..  +++.||+|.+....   .. .....+++ .......++++......+...  ..
T Consensus         1 ~y~~~~~ig~g~~g~v~~~~~-~~~~~~~~~alK~~~~~~~~~~~~~~~~~~e~-~~l~~l~h~~i~~~~~~~~~~~~~~   78 (316)
T cd07842           1 KYEIEGCIGRGTYGRVYKAKR-KNGKDGKEYAIKKFKGDKEQYTGISQSACREI-ALLRELKHENVVSLVEVFLEHADKS   78 (316)
T ss_pred             CceEEEEeccCCcEEEEEEEe-cCCCCCCeEEEEEeccccccccCccHHHHHHH-HHHHhcCCCCccceEEEEeCCCCce
Confidence            589999999999999999995 45  78999999987632   11 11111121 223345677888888877766  78


Q ss_pred             eEEEEEecCCCCHHHHHHHHHhhC-CChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeeccCCCC
Q 018699          121 SILVCDYLSQGTLQDAINSYVVIG-KSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSG  199 (351)
Q Consensus       121 ~~lv~e~~~~~sL~~~l~~~~~~~-~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~~~~  199 (351)
                      .++||||++ ++|.+.+....... ..+++..++.++.|++.|+.|||+.+++|+||+|+||+++.++.           
T Consensus        79 ~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~h~dlkp~Nil~~~~~~-----------  146 (316)
T cd07842          79 VYLLFDYAE-HDLWQIIKFHRQAKRVSIPPSMVKSLLWQILNGVHYLHSNWVLHRDLKPANILVMGEGP-----------  146 (316)
T ss_pred             EEEEEeCCC-cCHHHHHHhhccCCCcCcCHHHHHHHHHHHHHHHHHHHhCCEeeCCCCHHHEEEcCCCC-----------
Confidence            999999995 57887776543222 37899999999999999999999999999999999999994221           


Q ss_pred             CcccCCeEEeecCCccccccCCC-CccccccccCCCcccceeccC-CCCCccchHhHHHHHHHHHHhCccccccccCCCC
Q 018699          200 PWQDQGLCLVDWGRGIDLHLFPD-NMEFEGDCRTSGFRCIEMQEK-KPWKFQVDTYGLCAIVHMMLHNSYMEIEKKASPD  277 (351)
Q Consensus       200 ~~~~~~~~l~Dfg~a~~~~~~~~-~~~~~~~~g~~~y~aPE~~~~-~~~~~~~DiwslG~il~~l~~g~~p~~~~~~~~~  277 (351)
                        .++.++|+|||++........ ........++..|+|||.+.+ ..++.++|||||||++|+|++|.+||........
T Consensus       147 --~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~  224 (316)
T cd07842         147 --ERGVVKIGDLGLARLFNAPLKPLADLDPVVVTIWYRAPELLLGARHYTKAIDIWAIGCIFAELLTLEPIFKGREAKIK  224 (316)
T ss_pred             --ccceEEECCCccccccCCCcccccccCCccccccccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhcCCCCcCCccccc
Confidence              378899999998865322111 111223457888999998866 4578999999999999999999999875443210


Q ss_pred             Cc--------------------------------------eee--ecCcchhh------hhHHHHHHHHHHHHhcCCCCC
Q 018699          278 GG--------------------------------------LVY--LPKLSFKR------YWKVELWKSLFTNLLNMSSGN  311 (351)
Q Consensus       278 ~~--------------------------------------~~~--~~~~~~~~------~~~~~~~~~li~~~L~~dP~~  311 (351)
                      ..                                      ...  .+......      ..+ ..+.++|.+||.+||.+
T Consensus       225 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~i~~~l~~~P~~  303 (316)
T cd07842         225 KSNPFQRDQLERIFEVLGTPTEKDWPDIKKMPEYDTLMKDFKTKTYPSNSLAKWMEKHKKPD-SQGFDLLRKLLEYDPTK  303 (316)
T ss_pred             ccchhHHHHHHHHHHHhCCCchhHHHHHhhcccchhhhhhccCCCCCCccHHHHHHhccCCC-HHHHHHHHHHhcCCccc
Confidence            00                                      000  00000001      112 56889999999999999


Q ss_pred             ChHHHHHHHHHH
Q 018699          312 DKEVLQNLQKSF  323 (351)
Q Consensus       312 R~s~~e~l~~~~  323 (351)
                      ||++.|++.|||
T Consensus       304 Rps~~eil~~~~  315 (316)
T cd07842         304 RITAEEALEHPY  315 (316)
T ss_pred             CcCHHHHhcCCC
Confidence            999999999986

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the

>cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk

Probab=100.00  E-value=3.1e-37  Score=271.39  Aligned_cols=252  Identities=12%  Similarity=0.085  Sum_probs=189.0

Q ss_pred             EEcCeeEEEEEEeeccCceEEEEEEecCCCCceEEEEecCCCCChHHHHHHHHHhhhccccccccccceeeecccCeeEE
Q 018699           44 EIGGKKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFPWEFYMYRQLDQRISGRERSSFGFAHRIHLYSDYSIL  123 (351)
Q Consensus        44 ~i~~~~Y~i~~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  123 (351)
                      +|..++|++.++||+|+||.||+|..  .+++.||+|.+............++ .......++++.....+. ..+..++
T Consensus         2 ~~~~~~~~~~~~ig~G~~g~v~~~~~--~~~~~~a~K~~~~~~~~~~~~~~E~-~~l~~l~h~~i~~~~~~~-~~~~~~~   77 (260)
T cd05067           2 EVPRETLKLVKKLGAGQFGEVWMGYY--NGHTKVAIKSLKQGSMSPEAFLAEA-NLMKQLQHPRLVRLYAVV-TQEPIYI   77 (260)
T ss_pred             ccchHHceeeeeeccCccceEEeeec--CCCceEEEEEecCCCCcHHHHHHHH-HHHHhcCCcCeeeEEEEE-ccCCcEE
Confidence            46678999999999999999999984  4567899999876544333333322 233344566776666654 3567899


Q ss_pred             EEEecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeeccCCCCCccc
Q 018699          124 VCDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSGPWQD  203 (351)
Q Consensus       124 v~e~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~~~~~~~~  203 (351)
                      +|||+++++|.+++....  +..+++..+..++.|++.|++|||+.|++|+||+|+||+++                 .+
T Consensus        78 v~e~~~~~~L~~~~~~~~--~~~~~~~~~~~i~~~i~~al~~LH~~~i~H~dl~p~ni~i~-----------------~~  138 (260)
T cd05067          78 ITEYMENGSLVDFLKTPE--GIKLTINKLIDMAAQIAEGMAFIERKNYIHRDLRAANILVS-----------------ET  138 (260)
T ss_pred             EEEcCCCCCHHHHHHhcC--CCCCCHHHHHHHHHHHHHHHHHHhcCCeecccccHHhEEEc-----------------CC
Confidence            999999999999986532  45788999999999999999999999999999999999999                 67


Q ss_pred             CCeEEeecCCccccccCCCCccccccccCCCcccceeccCCCCCccchHhHHHHHHHHHHh-CccccccccCCCCC-cee
Q 018699          204 QGLCLVDWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQEKKPWKFQVDTYGLCAIVHMMLH-NSYMEIEKKASPDG-GLV  281 (351)
Q Consensus       204 ~~~~l~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~-g~~p~~~~~~~~~~-~~~  281 (351)
                      +.++|+|||.+...... .........++..|+|||.+.+..++.++||||||+++|++++ |..||......... ...
T Consensus       139 ~~~~l~dfg~~~~~~~~-~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~  217 (260)
T cd05067         139 LCCKIADFGLARLIEDN-EYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTYGRIPYPGMTNPEVIQNLE  217 (260)
T ss_pred             CCEEEccCcceeecCCC-CcccccCCcccccccCHHHhccCCcCcccchHHHHHHHHHHHhCCCCCCCCCChHHHHHHHH
Confidence            78999999988643211 1111222345678999999988888999999999999999998 99998654321100 000


Q ss_pred             eecCcchhhhhHHHHHHHHHHHHhcCCCCCChHHHHHHH
Q 018699          282 YLPKLSFKRYWKVELWKSLFTNLLNMSSGNDKEVLQNLQ  320 (351)
Q Consensus       282 ~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~  320 (351)
                      .....+.+...+ ..+.++|.+||+.+|++||++.+++.
T Consensus       218 ~~~~~~~~~~~~-~~~~~li~~~l~~~p~~Rp~~~~l~~  255 (260)
T cd05067         218 RGYRMPRPDNCP-EELYELMRLCWKEKPEERPTFEYLRS  255 (260)
T ss_pred             cCCCCCCCCCCC-HHHHHHHHHHccCChhhCCCHHHHHH
Confidence            011112223333 78999999999999999999998875

Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr

>cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase

Probab=100.00  E-value=2.2e-37  Score=272.66  Aligned_cols=244  Identities=21%  Similarity=0.226  Sum_probs=191.8

Q ss_pred             eeccCceEEEEEEecCCCCceEEEEecCCCCCh---HHHHHHHHHhhhccccccccccceeeecccCeeEEEEEecCCCC
Q 018699           56 AGQGGFAKVFKAYVNGDPEDVVALKIQKPAFPW---EFYMYRQLDQRISGRERSSFGFAHRIHLYSDYSILVCDYLSQGT  132 (351)
Q Consensus        56 lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~~~---e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~s  132 (351)
                      ||.|++|.||+|+ +..+++.||+|++.+....   ....+......+....|+++.........+...++|+||+++++
T Consensus         1 lg~g~~~~v~~~~-~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~   79 (262)
T cd05572           1 LGVGGFGRVELVK-VKSKNRTFALKCVKKRHIVETGQQEHIFSEKEILEECNHPFIVKLYRTFKDKKYIYMLMEYCLGGE   79 (262)
T ss_pred             CCCCCceEEEEEE-ECCCCcEEEEEEEehhcchhhhHHHHHHHHHHHHHhCCCCCEeeeeeeEEcCCccEEEEecCCCCc
Confidence            6899999999999 5667899999998754322   11222222334455577888888888788889999999999999


Q ss_pred             HHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeeccCCCCCcccCCeEEeecC
Q 018699          133 LQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSGPWQDQGLCLVDWG  212 (351)
Q Consensus       133 L~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~~~~~~~~~~~~l~Dfg  212 (351)
                      |.+++.+    ...+++..+..++.|++.|++|||++|++|+||+|+||+++                 .++.++|+|||
T Consensus        80 L~~~l~~----~~~l~~~~~~~~~~~i~~~l~~lH~~~~~h~dl~~~nilv~-----------------~~~~~~l~df~  138 (262)
T cd05572          80 LWTILRD----RGLFDEYTARFYIACVVLAFEYLHNRGIIYRDLKPENLLLD-----------------SNGYVKLVDFG  138 (262)
T ss_pred             HHHHHhh----cCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCHHHEEEc-----------------CCCCEEEeeCC
Confidence            9999987    45789999999999999999999999999999999999999                 67789999999


Q ss_pred             CccccccCCCCccccccccCCCcccceeccCCCCCccchHhHHHHHHHHHHhCccccccccCCC--CCceee--ecCcch
Q 018699          213 RGIDLHLFPDNMEFEGDCRTSGFRCIEMQEKKPWKFQVDTYGLCAIVHMMLHNSYMEIEKKASP--DGGLVY--LPKLSF  288 (351)
Q Consensus       213 ~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~p~~~~~~~~--~~~~~~--~~~~~~  288 (351)
                      .+......   .......++..|++||.+.+..++.++|+||+|+++|+|++|..||.......  ......  ......
T Consensus       139 ~~~~~~~~---~~~~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~  215 (262)
T cd05572         139 FAKKLKSG---QKTWTFCGTPEYVAPEIILNKGYDFSVDYWSLGILLYELLTGRPPFGEDDEDPMEIYNDILKGNGKLEF  215 (262)
T ss_pred             cccccCcc---cccccccCCcCccChhHhcCCCCCChhhhhhhHHHHHHHHhCCCCcCCCCCCHHHHHHHHhccCCCCCC
Confidence            88654321   12233467889999999988888999999999999999999999997655210  000001  122333


Q ss_pred             hhhhHHHHHHHHHHHHhcCCCCCChH-----HHHHHHHHHHH
Q 018699          289 KRYWKVELWKSLFTNLLNMSSGNDKE-----VLQNLQKSFQD  325 (351)
Q Consensus       289 ~~~~~~~~~~~li~~~L~~dP~~R~s-----~~e~l~~~~~~  325 (351)
                      |...+ +.+.++|.+||..||++||+     +.|+++|||..
T Consensus       216 ~~~~~-~~~~~~i~~~l~~~p~~R~~~~~~~~~~l~~~~~~~  256 (262)
T cd05572         216 PNYID-KAAKDLIKQLLRRNPEERLGNLKGGIKDIKKHKWFN  256 (262)
T ss_pred             CcccC-HHHHHHHHHHccCChhhCcCCcccCHHHHhcChhhh
Confidence            33333 78999999999999999999     99999998754

Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi

>cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk

Probab=100.00  E-value=2.2e-37  Score=272.30  Aligned_cols=251  Identities=12%  Similarity=0.086  Sum_probs=185.8

Q ss_pred             EcCeeEEEEEEeeccCceEEEEEEecCCCCceEEEEecCCCCChHHHHHHHHHhhhccccccccccceeeecccCeeEEE
Q 018699           45 IGGKKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFPWEFYMYRQLDQRISGRERSSFGFAHRIHLYSDYSILV  124 (351)
Q Consensus        45 i~~~~Y~i~~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv  124 (351)
                      +..++|++.+.||+|++|.||+|.+  ..+..+|+|.+...........+++. ......++++........ ....+++
T Consensus         3 ~~~~~~~~~~~ig~g~~~~v~~~~~--~~~~~~~~k~~~~~~~~~~~~~~E~~-~l~~l~~~~i~~~~~~~~-~~~~~lv   78 (260)
T cd05070           3 IPRESLQLIKKLGNGQFGEVWMGTW--NGNTKVAVKTLKPGTMSPESFLEEAQ-IMKKLRHDKLVQLYAVVS-EEPIYIV   78 (260)
T ss_pred             CchHHhhhhheeccccCceEEEEEe--cCCceeEEEEecCCCCCHHHHHHHHH-HHHhcCCCceEEEEeEEC-CCCcEEE
Confidence            4567899999999999999999984  34567999998765444333333322 233445666666665553 4567899


Q ss_pred             EEecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeeccCCCCCcccC
Q 018699          125 CDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSGPWQDQ  204 (351)
Q Consensus       125 ~e~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~~~~~~~~~  204 (351)
                      |||+++++|.+++....  ...+++..++.++.|++.|+.|||++|++|+||+|+||+++                 .++
T Consensus        79 ~e~~~~~~L~~~~~~~~--~~~~~~~~~~~~~~~l~~al~~lH~~~i~H~di~p~Nili~-----------------~~~  139 (260)
T cd05070          79 TEYMSKGSLLDFLKDGE--GRALKLPNLVDMAAQVAAGMAYIERMNYIHRDLRSANILVG-----------------DGL  139 (260)
T ss_pred             EEecCCCcHHHHHHhcC--CCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCccceEEEe-----------------CCc
Confidence            99999999999987632  34689999999999999999999999999999999999999                 677


Q ss_pred             CeEEeecCCccccccCCCCccccccccCCCcccceeccCCCCCccchHhHHHHHHHHHHh-CccccccccCCCCCce-ee
Q 018699          205 GLCLVDWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQEKKPWKFQVDTYGLCAIVHMMLH-NSYMEIEKKASPDGGL-VY  282 (351)
Q Consensus       205 ~~~l~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~-g~~p~~~~~~~~~~~~-~~  282 (351)
                      .++|+|||.+...... .........++..|+|||...+..++.++||||||+++|+|++ |..||........... ..
T Consensus       140 ~~~l~dfg~~~~~~~~-~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~~~~~~~~~~  218 (260)
T cd05070         140 VCKIADFGLARLIEDN-EYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMNNREVLEQVER  218 (260)
T ss_pred             eEEeCCceeeeeccCc-ccccccCCCCCccccChHHHhcCCCcchhhhHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHc
Confidence            7999999988643211 1111122234567999999988888999999999999999999 8888865432210000 00


Q ss_pred             ecCcchhhhhHHHHHHHHHHHHhcCCCCCChHHHHHHH
Q 018699          283 LPKLSFKRYWKVELWKSLFTNLLNMSSGNDKEVLQNLQ  320 (351)
Q Consensus       283 ~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~  320 (351)
                      ....+.+...+ ..+.+|+.+||.+||++||++.++..
T Consensus       219 ~~~~~~~~~~~-~~~~~li~~~l~~~p~~Rpt~~~l~~  255 (260)
T cd05070         219 GYRMPCPQDCP-ISLHELMLQCWKKDPEERPTFEYLQS  255 (260)
T ss_pred             CCCCCCCCcCC-HHHHHHHHHHcccCcccCcCHHHHHH
Confidence            11222233333 78999999999999999999997763

Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r

>cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase

Probab=100.00  E-value=3.8e-37  Score=269.78  Aligned_cols=254  Identities=18%  Similarity=0.156  Sum_probs=197.1

Q ss_pred             eEEEEEEeeccCceEEEEEEecCCCCceEEEEecCCCCCh--HHHHHHHHHhhhccccccccccceeeecccCeeEEEEE
Q 018699           49 KYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFPW--EFYMYRQLDQRISGRERSSFGFAHRIHLYSDYSILVCD  126 (351)
Q Consensus        49 ~Y~i~~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~~~--e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e  126 (351)
                      +|++.+.||.|++|.||+|. +..+++.|++|.+......  ................++++.........++..++|+|
T Consensus         1 ~y~~~~~l~~g~~~~v~~~~-~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~lv~e   79 (258)
T cd08215           1 KYEIIKQIGKGSFGKVYLVR-RKSDGKLYVLKEIDLSNMSEKEREDALNEVKILKKLNHPNIIKYYESFEEKGKLCIVME   79 (258)
T ss_pred             CceEEeeeccCCCeEEEEEE-EcCCCcEEEEEEeecccCChHHHHHHHHHHHHHHhcCCCChhheEEEEecCCEEEEEEE
Confidence            58999999999999999999 4667899999998765432  22222222233344457778777777777889999999


Q ss_pred             ecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeeccCCCCCcccCCe
Q 018699          127 YLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSGPWQDQGL  206 (351)
Q Consensus       127 ~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~~~~~~~~~~~  206 (351)
                      ++++++|.+.+......+..+++..+..++.+++.|+.+||++|++|+||+|+||+++                 .++.+
T Consensus        80 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~H~dl~~~nil~~-----------------~~~~~  142 (258)
T cd08215          80 YADGGDLSQKIKKQKKEGKPFPEEQILDWFVQLCLALKYLHSRKILHRDIKPQNIFLT-----------------SNGLV  142 (258)
T ss_pred             ecCCCcHHHHHHHhhccCCCcCHHHHHHHHHHHHHHHHHHHhCCEecccCChHHeEEc-----------------CCCcE
Confidence            9999999999987532246799999999999999999999999999999999999999                 67789


Q ss_pred             EEeecCCccccccCCCCccccccccCCCcccceeccCCCCCccchHhHHHHHHHHHHhCccccccccCCCC-CceeeecC
Q 018699          207 CLVDWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQEKKPWKFQVDTYGLCAIVHMMLHNSYMEIEKKASPD-GGLVYLPK  285 (351)
Q Consensus       207 ~l~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~p~~~~~~~~~-~~~~~~~~  285 (351)
                      +|+|||.+......  ........+++.|+|||...+..++.++|+||+|+++++|++|..||........ ........
T Consensus       143 ~l~d~~~~~~~~~~--~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~  220 (258)
T cd08215         143 KLGDFGISKVLSST--VDLAKTVVGTPYYLSPELCQNKPYNYKSDIWSLGCVLYELCTLKHPFEGENLLELALKILKGQY  220 (258)
T ss_pred             EECCccceeecccC--cceecceeeeecccChhHhccCCCCccccHHHHHHHHHHHHcCCCCCCCCcHHHHHHHHhcCCC
Confidence            99999988643221  1122334678899999999888889999999999999999999999865432210 00011112


Q ss_pred             cchhhhhHHHHHHHHHHHHhcCCCCCChHHHHHHHHHH
Q 018699          286 LSFKRYWKVELWKSLFTNLLNMSSGNDKEVLQNLQKSF  323 (351)
Q Consensus       286 ~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~~~~  323 (351)
                      ..++..++ ..+.++|.+||+.+|++||++.++|.|||
T Consensus       221 ~~~~~~~~-~~~~~~i~~~l~~~p~~Rp~~~~ll~~~~  257 (258)
T cd08215         221 PPIPSQYS-SELRNLVSSLLQKDPEERPSIAQILQSPF  257 (258)
T ss_pred             CCCCCCCC-HHHHHHHHHHcCCChhhCcCHHHHhcCCC
Confidence            22333344 78999999999999999999999999986

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They

>cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins

Probab=100.00  E-value=6.1e-37  Score=276.20  Aligned_cols=251  Identities=17%  Similarity=0.128  Sum_probs=192.5

Q ss_pred             eeEEEEEEeeccCceEEEEEEecCCCCceEEEEecCCCCChHHH----HHHHHHhhhccccccccccceeeecccCeeEE
Q 018699           48 KKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFPWEFY----MYRQLDQRISGRERSSFGFAHRIHLYSDYSIL  123 (351)
Q Consensus        48 ~~Y~i~~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~~~e~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  123 (351)
                      .+|++.+.||+|++|+||+|. +..+++.||+|.+.........    ...++ .......|+++.....++...+..++
T Consensus        15 ~~y~~~~~lg~g~~g~vy~~~-~~~~~~~v~iK~~~~~~~~~~~~~~~~~~Ei-~~l~~l~h~niv~~~~~~~~~~~~~l   92 (307)
T cd06607          15 KLFTDLREIGHGSFGAVYFAR-DVRTNEVVAIKKMSYSGKQSNEKWQDIIKEV-RFLQQLRHPNTIEYKGCYLREHTAWL   92 (307)
T ss_pred             hhhhhheeecCCCCeEEEEEE-EcCCCcEEEEEEEeccccCcHHHHHHHHHHH-HHHHhCCCCCEEEEEEEEEeCCeEEE
Confidence            569999999999999999999 5667899999988644322221    22222 23445678888888888888889999


Q ss_pred             EEEecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeeccCCCCCccc
Q 018699          124 VCDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSGPWQD  203 (351)
Q Consensus       124 v~e~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~~~~~~~~  203 (351)
                      |+||+. +++.+.+...   ...+++..+..++.|++.|+.|||+.|++|+||+|+||+++                 .+
T Consensus        93 v~e~~~-g~l~~~~~~~---~~~l~~~~~~~~~~ql~~~L~~LH~~~i~H~dl~p~nIl~~-----------------~~  151 (307)
T cd06607          93 VMEYCL-GSASDILEVH---KKPLQEVEIAAICHGALQGLAYLHSHERIHRDIKAGNILLT-----------------EP  151 (307)
T ss_pred             EHHhhC-CCHHHHHHHc---ccCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCcccEEEC-----------------CC
Confidence            999995 6888777653   35789999999999999999999999999999999999999                 67


Q ss_pred             CCeEEeecCCccccccCCCCccccccccCCCcccceecc---CCCCCccchHhHHHHHHHHHHhCccccccccCCCCC-c
Q 018699          204 QGLCLVDWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQE---KKPWKFQVDTYGLCAIVHMMLHNSYMEIEKKASPDG-G  279 (351)
Q Consensus       204 ~~~~l~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~---~~~~~~~~DiwslG~il~~l~~g~~p~~~~~~~~~~-~  279 (351)
                      +.++|+|||++....      ......++..|+|||.+.   ...++.++||||+|+++|+|++|..||......... .
T Consensus       152 ~~~kL~dfg~~~~~~------~~~~~~~~~~y~aPE~~~~~~~~~~~~~sDv~s~G~il~el~tg~~p~~~~~~~~~~~~  225 (307)
T cd06607         152 GTVKLADFGSASLVS------PANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYH  225 (307)
T ss_pred             CCEEEeecCcceecC------CCCCccCCccccCceeeeccCCCCCCcccchHHHHHHHHHHHcCCCCCCCccHHHHHHH
Confidence            789999999885422      112345788999999874   356788999999999999999999998654321100 0


Q ss_pred             eee-ecCcchhhhhHHHHHHHHHHHHhcCCCCCChHHHHHHHHHHHHHHh
Q 018699          280 LVY-LPKLSFKRYWKVELWKSLFTNLLNMSSGNDKEVLQNLQKSFQDYLC  328 (351)
Q Consensus       280 ~~~-~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~~~~~~~~~  328 (351)
                      ... ......+..|+ +.+.++|.+||..||++||++.+++.|+|.....
T Consensus       226 ~~~~~~~~~~~~~~~-~~~~~li~~~l~~~p~~Rp~~~~il~~~~~~~~~  274 (307)
T cd06607         226 IAQNDSPTLSSNDWS-DYFRNFVDSCLQKIPQDRPSSEELLKHRFVLRER  274 (307)
T ss_pred             HhcCCCCCCCchhhC-HHHHHHHHHHhcCChhhCcCHHHHhcChhhcccC
Confidence            000 01111123355 7899999999999999999999999998865443

Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily

>KOG0577 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=8.9e-39  Score=289.69  Aligned_cols=249  Identities=17%  Similarity=0.133  Sum_probs=200.0

Q ss_pred             eeEEEEEEeeccCceEEEEEEecCCCCceEEEEecCCCCChHHHHHHHHHh---hhccccccccccceeeecccCeeEEE
Q 018699           48 KKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFPWEFYMYRQLDQ---RISGRERSSFGFAHRIHLYSDYSILV  124 (351)
Q Consensus        48 ~~Y~i~~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~~~e~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~lv  124 (351)
                      ..|.-.+.||.|+||.||-|+ +..+.+.||||++.-.-....+.+..+..   .+....||+.+....++.-....|+|
T Consensus        26 klf~dLrEIGHGSFGAVYfAr-d~~n~evVAIKKMsySGKQs~EKWqDIlKEVrFL~~l~HPntieYkgCyLre~TaWLV  104 (948)
T KOG0577|consen   26 KLFSDLREIGHGSFGAVYFAR-DVRNSEVVAIKKMSYSGKQSNEKWQDILKEVRFLRQLRHPNTIEYKGCYLREHTAWLV  104 (948)
T ss_pred             HHHHHHHHhcCCccceeEEee-ccCccceeeeeeccccccccHHHHHHHHHHHHHHHhccCCCcccccceeeccchHHHH
Confidence            357778899999999999999 67888999999987654444444444333   24455667766666666656667999


Q ss_pred             EEecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeeccCCCCCcccC
Q 018699          125 CDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSGPWQDQ  204 (351)
Q Consensus       125 ~e~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~~~~~~~~~  204 (351)
                      |||| -|+-.+++.-.   .+++-+..+..|+.+.+.||+|||+++.||||||..||++.                 ..|
T Consensus       105 MEYC-lGSAsDlleVh---kKplqEvEIAAi~~gaL~gLaYLHS~~~IHRDiKAGNILLs-----------------e~g  163 (948)
T KOG0577|consen  105 MEYC-LGSASDLLEVH---KKPLQEVEIAAITHGALQGLAYLHSHNRIHRDIKAGNILLS-----------------EPG  163 (948)
T ss_pred             HHHH-hccHHHHHHHH---hccchHHHHHHHHHHHHHHHHHHHHhhHHhhhccccceEec-----------------CCC
Confidence            9999 67999998877   58999999999999999999999999999999999999999                 788


Q ss_pred             CeEEeecCCccccccCCCCccccccccCCCcccceec---cCCCCCccchHhHHHHHHHHHHhCccccccccCCC-CCce
Q 018699          205 GLCLVDWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQ---EKKPWKFQVDTYGLCAIVHMMLHNSYMEIEKKASP-DGGL  280 (351)
Q Consensus       205 ~~~l~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~---~~~~~~~~~DiwslG~il~~l~~g~~p~~~~~~~~-~~~~  280 (351)
                      .|||+|||.|....      +-.+++|||.|||||++   ..+.|+-++||||||++..+|.-.++|.+..+... .+..
T Consensus       164 ~VKLaDFGSAsi~~------PAnsFvGTPywMAPEVILAMDEGqYdgkvDvWSLGITCIELAERkPPlFnMNAMSALYHI  237 (948)
T KOG0577|consen  164 LVKLADFGSASIMA------PANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHI  237 (948)
T ss_pred             eeeeccccchhhcC------chhcccCCccccchhHheeccccccCCccceeeccchhhhhhhcCCCccCchHHHHHHHH
Confidence            99999999885432      34567899999999997   45779999999999999999999999987655431 1111


Q ss_pred             eeec-CcchhhhhHHHHHHHHHHHHhcCCCCCChHHHHHHHHHHHH
Q 018699          281 VYLP-KLSFKRYWKVELWKSLFTNLLNMSSGNDKEVLQNLQKSFQD  325 (351)
Q Consensus       281 ~~~~-~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~~~~~~  325 (351)
                      .... +.--...|+ +.++.|+..||.+-|.+|||++++|+|+|.-
T Consensus       238 AQNesPtLqs~eWS-~~F~~Fvd~CLqKipqeRptse~ll~H~fv~  282 (948)
T KOG0577|consen  238 AQNESPTLQSNEWS-DYFRNFVDSCLQKIPQERPTSEELLKHRFVL  282 (948)
T ss_pred             HhcCCCCCCCchhH-HHHHHHHHHHHhhCcccCCcHHHHhhcchhc
Confidence            1122 222356688 9999999999999999999999999999843

>cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases

Probab=100.00  E-value=3.7e-37  Score=270.92  Aligned_cols=253  Identities=13%  Similarity=0.089  Sum_probs=190.6

Q ss_pred             EEcCeeEEEEEEeeccCceEEEEEEecCCCCceEEEEecCCCCChHHHHHHHHHhhhccccccccccceeeecccCeeEE
Q 018699           44 EIGGKKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFPWEFYMYRQLDQRISGRERSSFGFAHRIHLYSDYSIL  123 (351)
Q Consensus        44 ~i~~~~Y~i~~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  123 (351)
                      ++..++|++.+.||.|++|+||+|.+ . .++.||+|.+............++. ......++++.............++
T Consensus         2 ~~~~~~~~i~~~ig~g~~~~v~~~~~-~-~~~~~~vK~~~~~~~~~~~~~~e~~-~l~~l~h~~i~~~~~~~~~~~~~~~   78 (261)
T cd05034           2 EIPRESLKLERKLGAGQFGEVWMGTW-N-GTTKVAVKTLKPGTMSPEAFLQEAQ-IMKKLRHDKLVQLYAVCSEEEPIYI   78 (261)
T ss_pred             ccchhheeeeeeeccCcceEEEEEEE-c-CCceEEEEEecCCccCHHHHHHHHH-HHhhCCCCCEeeeeeeeecCCceEE
Confidence            46678999999999999999999984 3 3477999998865443333333322 3344557788888877777788999


Q ss_pred             EEEecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeeccCCCCCccc
Q 018699          124 VCDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSGPWQD  203 (351)
Q Consensus       124 v~e~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~~~~~~~~  203 (351)
                      ||||+++++|.+++....  +..++...+..++.|++.|+.|||++|++|+||+|+||+++                 .+
T Consensus        79 v~e~~~~~~L~~~i~~~~--~~~~~~~~~~~~~~~i~~al~~lh~~~i~h~di~p~nili~-----------------~~  139 (261)
T cd05034          79 VTEYMSKGSLLDFLKSGE--GKKLRLPQLVDMAAQIAEGMAYLESRNYIHRDLAARNILVG-----------------EN  139 (261)
T ss_pred             EEeccCCCCHHHHHhccc--cCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCcchheEEEc-----------------CC
Confidence            999999999999997642  35789999999999999999999999999999999999999                 67


Q ss_pred             CCeEEeecCCccccccCCCCccccccccCCCcccceeccCCCCCccchHhHHHHHHHHHHh-CccccccccCCCCCce-e
Q 018699          204 QGLCLVDWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQEKKPWKFQVDTYGLCAIVHMMLH-NSYMEIEKKASPDGGL-V  281 (351)
Q Consensus       204 ~~~~l~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~-g~~p~~~~~~~~~~~~-~  281 (351)
                      +.++|+|||.+...... .........++..|+|||.+.+..++.++|+||+|+++|++++ |..||........... .
T Consensus       140 ~~~~l~d~g~~~~~~~~-~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~~~~~~~~  218 (261)
T cd05034         140 LVCKIADFGLARLIEDD-EYTAREGAKFPIKWTAPEAANYGRFTIKSDVWSFGILLTEIVTYGRVPYPGMTNREVLEQVE  218 (261)
T ss_pred             CCEEECccccceeccch-hhhhhhccCCCccccCHHHhccCCcCchhHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHH
Confidence            88999999988643211 0111122234567999999988888999999999999999998 9999864332110000 0


Q ss_pred             eecCcchhhhhHHHHHHHHHHHHhcCCCCCChHHHHHHH
Q 018699          282 YLPKLSFKRYWKVELWKSLFTNLLNMSSGNDKEVLQNLQ  320 (351)
Q Consensus       282 ~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~  320 (351)
                      .....+.+...+ ..+.+++.+||..+|.+||++.+++.
T Consensus       219 ~~~~~~~~~~~~-~~~~~~i~~~l~~~p~~Rp~~~~l~~  256 (261)
T cd05034         219 RGYRMPRPPNCP-EELYDLMLQCWDKDPEERPTFEYLQS  256 (261)
T ss_pred             cCCCCCCCCCCC-HHHHHHHHHHcccCcccCCCHHHHHH
Confidence            001111122223 67899999999999999999988764

Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t

>cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor

Probab=100.00  E-value=3.5e-37  Score=275.23  Aligned_cols=260  Identities=13%  Similarity=0.076  Sum_probs=188.1

Q ss_pred             EEcCeeEEEEEEeeccCceEEEEEEec----CCCCceEEEEecCCCCChHH-HHHHHHHhhhccccccccccceeeeccc
Q 018699           44 EIGGKKYQIKGCAGQGGFAKVFKAYVN----GDPEDVVALKIQKPAFPWEF-YMYRQLDQRISGRERSSFGFAHRIHLYS  118 (351)
Q Consensus        44 ~i~~~~Y~i~~~lg~G~~g~V~~a~~~----~~~~~~vaiK~~~~~~~~e~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~  118 (351)
                      ++..++|++.+.||+|+||.||+|.++    ...+..||+|.+........ ..............++++.........+
T Consensus         2 ~~~~~~~~i~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~   81 (288)
T cd05061           2 EVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVRLLGVVSKG   81 (288)
T ss_pred             cccHHHceeeeeecCCCCcEEEEEEEeccCCCCcceEEEEEECCCcCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCC
Confidence            456789999999999999999999742    13456899999875543221 1111122233445677888888877778


Q ss_pred             CeeEEEEEecCCCCHHHHHHHHHhh------CCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCccee
Q 018699          119 DYSILVCDYLSQGTLQDAINSYVVI------GKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTV  192 (351)
Q Consensus       119 ~~~~lv~e~~~~~sL~~~l~~~~~~------~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~  192 (351)
                      +..|+||||+++|+|.+++......      ....+...+..++.|++.|+.|||+++|+|+||+|+||+++        
T Consensus        82 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dikp~nili~--------  153 (288)
T cd05061          82 QPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAKKFVHRDLAARNCMVA--------  153 (288)
T ss_pred             CCcEEEEeCCCCCCHHHHHHHhccccccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcCCCCChheEEEc--------
Confidence            8899999999999999999764210      12345677889999999999999999999999999999999        


Q ss_pred             eccCCCCCcccCCeEEeecCCccccccCCCCccccccccCCCcccceeccCCCCCccchHhHHHHHHHHHHh-Ccccccc
Q 018699          193 LDHDRSGPWQDQGLCLVDWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQEKKPWKFQVDTYGLCAIVHMMLH-NSYMEIE  271 (351)
Q Consensus       193 ~~~~~~~~~~~~~~~l~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~-g~~p~~~  271 (351)
                               .++.++|+|||++................++..|+|||.+.+..++.++|+|||||++|+|++ |..||..
T Consensus       154 ---------~~~~~~L~Dfg~~~~~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~DvwslG~~l~el~~~~~~p~~~  224 (288)
T cd05061         154 ---------HDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQG  224 (288)
T ss_pred             ---------CCCcEEECcCCccccccccccccccCCCcccccccCHHHhccCCCChHhHHHHHHHHHHHHHhCCCCCCCC
Confidence                     677899999998864321111111122234677999999988888999999999999999998 6778764


Q ss_pred             ccCCCCCceee-ecCcchhhhhHHHHHHHHHHHHhcCCCCCChHHHHHHHH
Q 018699          272 KKASPDGGLVY-LPKLSFKRYWKVELWKSLFTNLLNMSSGNDKEVLQNLQK  321 (351)
Q Consensus       272 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~~  321 (351)
                      ........... ......+...+ +.+.+++.+||+.||++||++.++++.
T Consensus       225 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~li~~~l~~~p~~Rps~~~ll~~  274 (288)
T cd05061         225 LSNEQVLKFVMDGGYLDQPDNCP-ERVTDLMRMCWQFNPKMRPTFLEIVNL  274 (288)
T ss_pred             CCHHHHHHHHHcCCCCCCCCCCC-HHHHHHHHHHcCCChhHCcCHHHHHHH
Confidence            32211000000 01111222223 789999999999999999999998764

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta

>cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases

Probab=100.00  E-value=6.3e-37  Score=273.91  Aligned_cols=252  Identities=18%  Similarity=0.244  Sum_probs=187.4

Q ss_pred             CeeEEEEEEeeccCceEEEEEEecCCCCceEEEEecCCCCChH--HHHHHHHHhhhccccccccccceeeecccCeeEEE
Q 018699           47 GKKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFPWE--FYMYRQLDQRISGRERSSFGFAHRIHLYSDYSILV  124 (351)
Q Consensus        47 ~~~Y~i~~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~~~e--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv  124 (351)
                      -++|++.+.||.|++|+||+|. +..+++.||+|.+.......  .....+ ........|+++.....+....+..++|
T Consensus         4 ~~~y~~~~~lg~g~~~~vy~~~-~~~~~~~~~iK~~~~~~~~~~~~~~~~E-~~~l~~l~h~~i~~~~~~~~~~~~~~lv   81 (291)
T cd07844           4 LETYKKLDKLGEGSYATVYKGR-SKLTGQLVALKEIRLEHEEGAPFTAIRE-ASLLKDLKHANIVTLHDIIHTKKTLTLV   81 (291)
T ss_pred             ccceeEEEEEeecCCeEEEEEE-EcCCCcEEEEEEEecccccCCchhHHHH-HHHHhhCCCcceeeEEEEEecCCeEEEE
Confidence            3689999999999999999999 56778999999976432211  111111 1223344577888888888888899999


Q ss_pred             EEecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeeccCCCCCcccC
Q 018699          125 CDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSGPWQDQ  204 (351)
Q Consensus       125 ~e~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~~~~~~~~~  204 (351)
                      |||+. ++|.+++...   +..+++..++.++.|++.||.|||++||+|+||+|+||+++                 .++
T Consensus        82 ~e~~~-~~L~~~~~~~---~~~~~~~~~~~~~~ql~~al~~lH~~~i~H~dl~p~nil~~-----------------~~~  140 (291)
T cd07844          82 FEYLD-TDLKQYMDDC---GGGLSMHNVRLFLFQLLRGLAYCHQRRVLHRDLKPQNLLIS-----------------ERG  140 (291)
T ss_pred             EecCC-CCHHHHHHhC---CCCCCHHHHHHHHHHHHHHHHHHHhCCeecccCCHHHEEEc-----------------CCC
Confidence            99996 5999988764   35788999999999999999999999999999999999999                 778


Q ss_pred             CeEEeecCCccccccCCCCccccccccCCCcccceeccC-CCCCccchHhHHHHHHHHHHhCccccccccCCC-------
Q 018699          205 GLCLVDWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQEK-KPWKFQVDTYGLCAIVHMMLHNSYMEIEKKASP-------  276 (351)
Q Consensus       205 ~~~l~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~~DiwslG~il~~l~~g~~p~~~~~~~~-------  276 (351)
                      .++|+|||.+.....  .........++..|+|||.+.+ ..++.++||||+|+++|+|++|..||.......       
T Consensus       141 ~~kl~dfg~~~~~~~--~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~~~~~~~~~~~~~  218 (291)
T cd07844         141 ELKLADFGLARAKSV--PSKTYSNEVVTLWYRPPDVLLGSTEYSTSLDMWGVGCIFYEMATGRPLFPGSTDVEDQLHKIF  218 (291)
T ss_pred             CEEECccccccccCC--CCccccccccccccCCcHHhhcCcccCcHHHHHHHHHHHHHHHhCCCCCCCCccHHHHHHHHH
Confidence            899999998864321  1111222346788999999865 557899999999999999999999985433100       


Q ss_pred             -------C------------Cceee--ecCcch----hhhhHHHHHHHHHHHHhcCCCCCChHHHHHHHHHH
Q 018699          277 -------D------------GGLVY--LPKLSF----KRYWKVELWKSLFTNLLNMSSGNDKEVLQNLQKSF  323 (351)
Q Consensus       277 -------~------------~~~~~--~~~~~~----~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~~~~  323 (351)
                             .            .....  ......    +..-....+.++|.+||+++|.+||++.+++.|+|
T Consensus       219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~~p~~Rps~~e~l~~~~  290 (291)
T cd07844         219 RVLGTPTEETWPGVSSNPEFKPYSFPFYPPRPLINHAPRLDRIPHGEELALKFLQYEPKKRISAAEAMKHPY  290 (291)
T ss_pred             HhcCCCChhhhhhhhhccccccccccccCChhHHHhCcCCCCchhHHHHHHHHhccCcccccCHHHHhcCCC
Confidence                   0            00000  000000    00000156789999999999999999999999875

Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the

>cd05122 PKc_STE Catalytic domain of STE family Protein Kinases

Probab=100.00  E-value=3.4e-37  Score=268.99  Aligned_cols=250  Identities=23%  Similarity=0.240  Sum_probs=193.9

Q ss_pred             eEEEEEEeeccCceEEEEEEecCCCCceEEEEecCCCCChHHHHHHHHHhhhccccccccccceeeecccCeeEEEEEec
Q 018699           49 KYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFPWEFYMYRQLDQRISGRERSSFGFAHRIHLYSDYSILVCDYL  128 (351)
Q Consensus        49 ~Y~i~~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~  128 (351)
                      .|++.+.||+|++|.||+|. +..+++.+++|++......................++++......+......++++||+
T Consensus         1 ~y~~~~~l~~g~~~~v~~~~-~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~l~~e~~   79 (253)
T cd05122           1 LFEILEKIGKGGFGEVYKAR-HKRTGKEVAIKVIKLESKEKKEKIINEIQILKKCKHPNIVKYYGSYLKKDELWIVMEFC   79 (253)
T ss_pred             CceeeeeeccCCceEEEEEE-ECCCCcEEEEEEecccchhHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeEEEEEecC
Confidence            48899999999999999999 45678999999987765422222222223334445777777777777788999999999


Q ss_pred             CCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeeccCCCCCcccCCeEE
Q 018699          129 SQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSGPWQDQGLCL  208 (351)
Q Consensus       129 ~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~~~~~~~~~~~~l  208 (351)
                      ++++|.+++...   ...+++..+..++.|++.|+.+||++|++|+||+|+||+++                 .++.++|
T Consensus        80 ~~~~L~~~~~~~---~~~~~~~~~~~i~~~i~~~l~~lh~~~i~h~dl~p~ni~i~-----------------~~~~~~l  139 (253)
T cd05122          80 SGGSLKDLLKST---NQTLTESQIAYVCKELLKGLEYLHSNGIIHRDIKAANILLT-----------------SDGEVKL  139 (253)
T ss_pred             CCCcHHHHHhhc---CCCCCHHHHHHHHHHHHHHHHHhhcCCEecCCCCHHHEEEc-----------------cCCeEEE
Confidence            999999998874   25789999999999999999999999999999999999999                 6778999


Q ss_pred             eecCCccccccCCCCccccccccCCCcccceeccCCCCCccchHhHHHHHHHHHHhCccccccccCCCCCce---eeecC
Q 018699          209 VDWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQEKKPWKFQVDTYGLCAIVHMMLHNSYMEIEKKASPDGGL---VYLPK  285 (351)
Q Consensus       209 ~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~p~~~~~~~~~~~~---~~~~~  285 (351)
                      +|||.+......   .......++..|+|||.+.+..++.++|+||||+++|+|++|..||...........   ...+.
T Consensus       140 ~d~~~~~~~~~~---~~~~~~~~~~~~~~PE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~  216 (253)
T cd05122         140 IDFGLSAQLSDT---KARNTMVGTPYWMAPEVINGKPYDYKADIWSLGITAIELAEGKPPYSELPPMKALFKIATNGPPG  216 (253)
T ss_pred             eecccccccccc---ccccceecCCcccCHHHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCCchHHHHHHHHhcCCCC
Confidence            999988654321   113345678899999999888889999999999999999999999875522100000   00011


Q ss_pred             cchhhhhHHHHHHHHHHHHhcCCCCCChHHHHHHHHHH
Q 018699          286 LSFKRYWKVELWKSLFTNLLNMSSGNDKEVLQNLQKSF  323 (351)
Q Consensus       286 ~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~~~~  323 (351)
                      ...+..++ ..+.++|.+||+.||++||++.+++.|||
T Consensus       217 ~~~~~~~~-~~~~~~i~~~l~~~p~~R~t~~~~l~~~~  253 (253)
T cd05122         217 LRNPEKWS-DEFKDFLKKCLQKNPEKRPTAEQLLKHPF  253 (253)
T ss_pred             cCcccccC-HHHHHHHHHHccCChhhCCCHHHHhcCCC
Confidence            11111123 78999999999999999999999999976

Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core

>cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases

Probab=100.00  E-value=4.3e-37  Score=270.08  Aligned_cols=249  Identities=13%  Similarity=0.100  Sum_probs=188.5

Q ss_pred             EEeeccCceEEEEEEecCCC---CceEEEEecCCCCChH-HHHHHHHHhhhccccccccccceeeecccCeeEEEEEecC
Q 018699           54 GCAGQGGFAKVFKAYVNGDP---EDVVALKIQKPAFPWE-FYMYRQLDQRISGRERSSFGFAHRIHLYSDYSILVCDYLS  129 (351)
Q Consensus        54 ~~lg~G~~g~V~~a~~~~~~---~~~vaiK~~~~~~~~e-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~  129 (351)
                      +.||+|+||.||+|.+ ...   +..|++|.+....... ...+...........++++.....+.......++||||++
T Consensus         1 ~~ig~g~~g~v~~~~~-~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~~   79 (262)
T cd00192           1 KKLGEGAFGEVYKGKL-KGKDGKTTEVAVKTLKEDASEEERKDFLKEARVMKKLGHPNVVRLLGVCTEEEPLYLVLEYME   79 (262)
T ss_pred             CccccCCceEEEEEEE-ecCCCCCceEEeEeeccccchhHHHHHHHHHHHHhhcCCCChheeeeeecCCCceEEEEEecc
Confidence            4689999999999995 333   7889999988665432 2222222223334447788888777777889999999999


Q ss_pred             CCCHHHHHHHHHhh-----CCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeeccCCCCCcccC
Q 018699          130 QGTLQDAINSYVVI-----GKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSGPWQDQ  204 (351)
Q Consensus       130 ~~sL~~~l~~~~~~-----~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~~~~~~~~~  204 (351)
                      +++|.+++......     +..+++..++.++.|++.|+.+||++|++|+||+|+||+++                 .++
T Consensus        80 ~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~i~H~di~p~nili~-----------------~~~  142 (262)
T cd00192          80 GGDLLDYLRKSRPVFPSPEKSTLSLKDLLSFAIQIAKGMEYLASKKFVHRDLAARNCLVG-----------------EDL  142 (262)
T ss_pred             CCcHHHHHhhccccccccccccCCHHHHHHHHHHHHHHHHHHHcCCcccCccCcceEEEC-----------------CCC
Confidence            99999999874111     26789999999999999999999999999999999999999                 678


Q ss_pred             CeEEeecCCccccccCCCCccccccccCCCcccceeccCCCCCccchHhHHHHHHHHHHh-CccccccccCCCCCce-ee
Q 018699          205 GLCLVDWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQEKKPWKFQVDTYGLCAIVHMMLH-NSYMEIEKKASPDGGL-VY  282 (351)
Q Consensus       205 ~~~l~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~-g~~p~~~~~~~~~~~~-~~  282 (351)
                      .++|+|||.+................++..|+|||.+.+..++.++||||||+++|+|++ |..||........... ..
T Consensus       143 ~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~  222 (262)
T cd00192         143 VVKISDFGLSRDVYDDDYYRKKTGGKLPIRWMAPESLKDGIFTSKSDVWSFGVLLWEIFTLGATPYPGLSNEEVLEYLRK  222 (262)
T ss_pred             cEEEcccccccccccccccccccCCCcCccccCHHHhccCCcchhhccHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHc
Confidence            899999999875432221122334456888999999988888999999999999999998 5888865432100000 00


Q ss_pred             ecCcchhhhhHHHHHHHHHHHHhcCCCCCChHHHHHHHH
Q 018699          283 LPKLSFKRYWKVELWKSLFTNLLNMSSGNDKEVLQNLQK  321 (351)
Q Consensus       283 ~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~~  321 (351)
                      ......+...+ ..+.+++.+||..||.+||++.|++.+
T Consensus       223 ~~~~~~~~~~~-~~~~~li~~~l~~~p~~Rps~~~l~~~  260 (262)
T cd00192         223 GYRLPKPEYCP-DELYELMLSCWQLDPEDRPTFSELVER  260 (262)
T ss_pred             CCCCCCCccCC-hHHHHHHHHHccCCcccCcCHHHHHHh
Confidence            11222233334 789999999999999999999999875

Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan

>cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7

Probab=100.00  E-value=8.2e-37  Score=274.09  Aligned_cols=249  Identities=21%  Similarity=0.233  Sum_probs=187.8

Q ss_pred             eEEEEEEeeccCceEEEEEEecCCCCceEEEEecCCCCCh------HHHHHHHHHhhhccccccccccceeeecccCeeE
Q 018699           49 KYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFPW------EFYMYRQLDQRISGRERSSFGFAHRIHLYSDYSI  122 (351)
Q Consensus        49 ~Y~i~~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~~~------e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  122 (351)
                      +|++.+.||.|++|.||+|. +..+++.||+|.+......      +.....++ .......|+++.....+....+..+
T Consensus         1 ~y~~~~~lg~g~~~~vy~~~-~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~e~-~~l~~~~h~~i~~~~~~~~~~~~~~   78 (298)
T cd07841           1 RYEKGKKLGEGTYAVVYKAR-DKETGRIVAIKKIKLGERKEAKDGINFTALREI-KLLQELKHPNIIGLLDVFGHKSNIN   78 (298)
T ss_pred             CceeeeeeeeccccEEEEEE-ECCCCcEEEEEEEeccccccccchhhHHHHHHH-HHHhhcCCCCChhhhheeecCCEEE
Confidence            58999999999999999999 4667899999998755332      11111121 2334445778888888888888999


Q ss_pred             EEEEecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeeccCCCCCcc
Q 018699          123 LVCDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSGPWQ  202 (351)
Q Consensus       123 lv~e~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~~~~~~~  202 (351)
                      +||||+ +++|.+++...   ...+++..++.++.||+.||.|||++|++|+||+|+||+++                 .
T Consensus        79 lv~e~~-~~~L~~~i~~~---~~~~~~~~~~~~~~qi~~al~~lH~~~i~H~dl~p~nill~-----------------~  137 (298)
T cd07841          79 LVFEFM-ETDLEKVIKDK---SIVLTPADIKSYMLMTLRGLEYLHSNWILHRDLKPNNLLIA-----------------S  137 (298)
T ss_pred             EEEccc-CCCHHHHHhcc---CCCCCHHHHHHHHHHHHHHHHHHHhCCeeecCCChhhEEEc-----------------C
Confidence            999999 99999999763   23789999999999999999999999999999999999999                 6


Q ss_pred             cCCeEEeecCCccccccCCCCccccccccCCCcccceeccC-CCCCccchHhHHHHHHHHHHhCccccccccCCCC----
Q 018699          203 DQGLCLVDWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQEK-KPWKFQVDTYGLCAIVHMMLHNSYMEIEKKASPD----  277 (351)
Q Consensus       203 ~~~~~l~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~~DiwslG~il~~l~~g~~p~~~~~~~~~----  277 (351)
                      ++.++|+|||++......  ........+++.|+|||.+.+ ..++.++|+|||||++|+|++|.+||........    
T Consensus       138 ~~~~~l~dfg~~~~~~~~--~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~e~~~g~~~~~~~~~~~~~~~~  215 (298)
T cd07841         138 DGVLKLADFGLARSFGSP--NRKMTHQVVTRWYRAPELLFGARHYGVGVDMWSVGCIFAELLLRVPFLPGDSDIDQLGKI  215 (298)
T ss_pred             CCCEEEccceeeeeccCC--CccccccccceeeeCHHHHhCCCCCCcHHHHHHHHHHHHHHHcCCccccCCccHHHHHHH
Confidence            778999999988653321  122233356788999998854 4578999999999999999999777654332100    


Q ss_pred             -------------------Cce--eeecCcchh---hhhHHHHHHHHHHHHhcCCCCCChHHHHHHHHHH
Q 018699          278 -------------------GGL--VYLPKLSFK---RYWKVELWKSLFTNLLNMSSGNDKEVLQNLQKSF  323 (351)
Q Consensus       278 -------------------~~~--~~~~~~~~~---~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~~~~  323 (351)
                                         ...  ...+..+..   ...+ ..+.++|.+||.+||++||++.+++.|+|
T Consensus       216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~li~~~l~~~P~~R~s~~e~l~~~~  284 (298)
T cd07841         216 FEALGTPTEENWPGVTSLPDYVEFKPFPPTPLKQIFPAAS-DDALDLLQRLLTLNPNKRITARQALEHPY  284 (298)
T ss_pred             HHHcCCCchhhhhhcccccccccccccCCcchhhhccccc-HHHHHHHHHHhcCCcccCcCHHHHhhCcc
Confidence                               000  000001100   1112 67899999999999999999999999875

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is

>cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3

Probab=100.00  E-value=4.1e-37  Score=273.54  Aligned_cols=258  Identities=13%  Similarity=0.068  Sum_probs=186.8

Q ss_pred             cCeeEEEEEEeeccCceEEEEEEecCCCCc----eEEEEecCCCCCh-HHHHHHHHHhhhccccccccccceeeecccCe
Q 018699           46 GGKKYQIKGCAGQGGFAKVFKAYVNGDPED----VVALKIQKPAFPW-EFYMYRQLDQRISGRERSSFGFAHRIHLYSDY  120 (351)
Q Consensus        46 ~~~~Y~i~~~lg~G~~g~V~~a~~~~~~~~----~vaiK~~~~~~~~-e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  120 (351)
                      ..++|++.+.||.|+||+||+|.+ ..+++    .+++|.+...... ................|++++....+.. +..
T Consensus         5 ~~~~~~~~~~lg~G~~~~vy~~~~-~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~h~~iv~~~~~~~-~~~   82 (279)
T cd05111           5 KETELRKLKLLGSGVFGTVHKGIW-IPEGDSIKIPVAIKTIQDRSGRQTFQEITDHMLAMGSLDHAYIVRLLGICP-GAS   82 (279)
T ss_pred             CHhhceeccccCccCCcceEEEEE-cCCCCceeeEEEEeecccccchHHHHHHHHHHHHHhcCCCCCcceEEEEEC-CCc
Confidence            456899999999999999999995 33344    5788887543221 1111111112234556778877777654 455


Q ss_pred             eEEEEEecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeeccCCCCC
Q 018699          121 SILVCDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSGP  200 (351)
Q Consensus       121 ~~lv~e~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~~~~~  200 (351)
                      .++++||+++++|.+++...   ...+++..+..++.|++.|+.|||++|++|+||+|+||+++                
T Consensus        83 ~~~i~e~~~~gsL~~~l~~~---~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~dlkp~nili~----------------  143 (279)
T cd05111          83 LQLVTQLSPLGSLLDHVRQH---RDSLDPQRLLNWCVQIAKGMYYLEEHRMVHRNLAARNILLK----------------  143 (279)
T ss_pred             cEEEEEeCCCCcHHHHHHhc---ccCCCHHHHHHHHHHHHHHHHHHHHCCEeccccCcceEEEc----------------
Confidence            78899999999999999764   45789999999999999999999999999999999999998                


Q ss_pred             cccCCeEEeecCCccccccCCCCccccccccCCCcccceeccCCCCCccchHhHHHHHHHHHHh-CccccccccCCCCCc
Q 018699          201 WQDQGLCLVDWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQEKKPWKFQVDTYGLCAIVHMMLH-NSYMEIEKKASPDGG  279 (351)
Q Consensus       201 ~~~~~~~l~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~-g~~p~~~~~~~~~~~  279 (351)
                       .++.++|+|||.+................++..|+|||.+.+..++.++|||||||++|++++ |..||..........
T Consensus       144 -~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~el~t~g~~p~~~~~~~~~~~  222 (279)
T cd05111         144 -SDSIVQIADFGVADLLYPDDKKYFYSEHKTPIKWMALESILFGRYTHQSDVWSYGVTVWEMMSYGAEPYAGMRPHEVPD  222 (279)
T ss_pred             -CCCcEEEcCCccceeccCCCcccccCCCCCcccccCHHHhccCCcCchhhHHHHHHHHHHHHcCCCCCCCCCCHHHHHH
Confidence             677899999999864322111111223346678999999988889999999999999999998 999986543221000


Q ss_pred             e-eeecCcchhhhhHHHHHHHHHHHHhcCCCCCChHHHHHHHHHHHHHH
Q 018699          280 L-VYLPKLSFKRYWKVELWKSLFTNLLNMSSGNDKEVLQNLQKSFQDYL  327 (351)
Q Consensus       280 ~-~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~~~~~~~~  327 (351)
                      . ......+.+..+. ..+.+++.+||..||++||++.+++. .|....
T Consensus       223 ~~~~~~~~~~~~~~~-~~~~~li~~c~~~~p~~Rps~~el~~-~l~~~~  269 (279)
T cd05111         223 LLEKGERLAQPQICT-IDVYMVMVKCWMIDENVRPTFKELAN-EFTRMA  269 (279)
T ss_pred             HHHCCCcCCCCCCCC-HHHHHHHHHHcCCCcccCcCHHHHHH-HHHHHH
Confidence            0 0011112222233 67789999999999999999999866 344433

Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r

>cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase

Probab=100.00  E-value=4e-37  Score=273.33  Aligned_cols=246  Identities=18%  Similarity=0.216  Sum_probs=188.0

Q ss_pred             eeccCceEEEEEEecCCCCceEEEEecCCCCChH---HHHHHHHHhhhccccccccccceeeecccCeeEEEEEecCCCC
Q 018699           56 AGQGGFAKVFKAYVNGDPEDVVALKIQKPAFPWE---FYMYRQLDQRISGRERSSFGFAHRIHLYSDYSILVCDYLSQGT  132 (351)
Q Consensus        56 lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~~~e---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~s  132 (351)
                      ||.|+||+||+|. +..+|+.||+|++.......   ...............++++......+...+..|+||||+++++
T Consensus         1 lg~g~~g~vy~~~-~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~   79 (277)
T cd05577           1 LGKGGFGEVCACQ-VKATGKMYACKKLDKKRLKKRKGEQMALNEKKILEKVSSRFIVSLAYAFETKDDLCLVMTLMNGGD   79 (277)
T ss_pred             CCCCCceeEEEEE-EcCCCcEEEEEEEehhhhhhhhhhHHHHHHHHHHHhCCCCCEeeeeeEEecCCeEEEEEecCCCCc
Confidence            6899999999999 56778999999986532211   1111111223344457777777777777889999999999999


Q ss_pred             HHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeeccCCCCCcccCCeEEeecC
Q 018699          133 LQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSGPWQDQGLCLVDWG  212 (351)
Q Consensus       133 L~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~~~~~~~~~~~~l~Dfg  212 (351)
                      |.+++....  ...+++..+..++.|++.|+.|||+.|++|+||+|+||+++                 .++.++|+|||
T Consensus        80 L~~~l~~~~--~~~~~~~~~~~~~~ql~~~l~~lH~~~i~H~di~p~Nil~~-----------------~~~~~~l~dfg  140 (277)
T cd05577          80 LKYHIYNVG--EPGFPEARAIFYAAQIICGLEHLHQRRIVYRDLKPENVLLD-----------------DHGNVRISDLG  140 (277)
T ss_pred             HHHHHHHcC--cCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEEC-----------------CCCCEEEccCc
Confidence            999987642  23689999999999999999999999999999999999999                 67789999999


Q ss_pred             CccccccCCCCccccccccCCCcccceeccCCCCCccchHhHHHHHHHHHHhCccccccccCCCCC----ceeeecCcch
Q 018699          213 RGIDLHLFPDNMEFEGDCRTSGFRCIEMQEKKPWKFQVDTYGLCAIVHMMLHNSYMEIEKKASPDG----GLVYLPKLSF  288 (351)
Q Consensus       213 ~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~p~~~~~~~~~~----~~~~~~~~~~  288 (351)
                      .+.....   ........++..|+|||.+.+..++.++|+||+|+++|+|++|..||.........    ..........
T Consensus       141 ~~~~~~~---~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~  217 (277)
T cd05577         141 LAVELKG---GKKIKGRAGTPGYMAPEVLQGEVYDFSVDWFALGCTLYEMIAGRSPFRQRKEKVEKEELKRRTLEMAVEY  217 (277)
T ss_pred             chhhhcc---CCccccccCCCCcCCHHHhcCCCCCchhhhHHHHHHHHHHhhCCCCCCCCcccccHHHHHhccccccccC
Confidence            8864321   22223345778899999998888899999999999999999999999654331010    0011122233


Q ss_pred             hhhhHHHHHHHHHHHHhcCCCCCCh-----HHHHHHHHHHHH
Q 018699          289 KRYWKVELWKSLFTNLLNMSSGNDK-----EVLQNLQKSFQD  325 (351)
Q Consensus       289 ~~~~~~~~~~~li~~~L~~dP~~R~-----s~~e~l~~~~~~  325 (351)
                      +..++ +.+.++|.+||+.||.+||     ++.+++.|||..
T Consensus       218 ~~~~~-~~~~~li~~~l~~~p~~R~~~~~~~~~~ll~h~~~~  258 (277)
T cd05577         218 PDKFS-PEAKDLCEALLQKDPEKRLGCRGGSADEVREHPLFK  258 (277)
T ss_pred             CccCC-HHHHHHHHHHccCChhHccCCCcccHHHHHhChhhh
Confidence            33344 7899999999999999999     888899998754

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of

>cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9

Probab=100.00  E-value=4.9e-37  Score=276.90  Aligned_cols=254  Identities=22%  Similarity=0.217  Sum_probs=183.9

Q ss_pred             CeeEEEEEEeeccCceEEEEEEecCCCCceEEEEecCCCCChH---HHHHHHHHhhhccccccccccceeeecc------
Q 018699           47 GKKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFPWE---FYMYRQLDQRISGRERSSFGFAHRIHLY------  117 (351)
Q Consensus        47 ~~~Y~i~~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~~~e---~~~~~~~~~~~~~~~~~~~~~~~~~~~~------  117 (351)
                      -++|++.+.||.|++|.||+|. +..+++.||||.+......+   .....++ .......|+++.....+...      
T Consensus        11 ~~~y~~~~~lg~g~~~~v~~~~-~~~~~~~~aik~~~~~~~~~~~~~~~~~e~-~~l~~l~h~~iv~~~~~~~~~~~~~~   88 (310)
T cd07865          11 VSKYEKLAKIGQGTFGEVFKAR-HKKTKQIVALKKVLMENEKEGFPITALREI-KILQLLKHENVVNLIEICRTKATPYN   88 (310)
T ss_pred             hhheEEEEEeecCCCEEEEEEE-ECCCCcEEEEEEEeccCCcCCchhHHHHHH-HHHHhCCCCCccceEEEEeccccccc
Confidence            3579999999999999999999 56788999999876432211   1112222 22334456777776665433      


Q ss_pred             --cCeeEEEEEecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeecc
Q 018699          118 --SDYSILVCDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDH  195 (351)
Q Consensus       118 --~~~~~lv~e~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~  195 (351)
                        ....++||||+ +++|.+.+...   +..+++.+++.++.|++.|+.|||++|++|+||+|+||+++           
T Consensus        89 ~~~~~~~lv~e~~-~~~l~~~l~~~---~~~~~~~~~~~i~~qi~~al~~lH~~~i~H~dl~p~nil~~-----------  153 (310)
T cd07865          89 RYKGSFYLVFEFC-EHDLAGLLSNK---NVKFTLSEIKKVMKMLLNGLYYIHRNKILHRDMKAANILIT-----------  153 (310)
T ss_pred             CCCceEEEEEcCC-CcCHHHHHHhc---ccCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEEC-----------
Confidence              24569999999 56888887653   34789999999999999999999999999999999999998           


Q ss_pred             CCCCCcccCCeEEeecCCccccccCCCC--ccccccccCCCcccceeccCC-CCCccchHhHHHHHHHHHHhCccccccc
Q 018699          196 DRSGPWQDQGLCLVDWGRGIDLHLFPDN--MEFEGDCRTSGFRCIEMQEKK-PWKFQVDTYGLCAIVHMMLHNSYMEIEK  272 (351)
Q Consensus       196 ~~~~~~~~~~~~l~Dfg~a~~~~~~~~~--~~~~~~~g~~~y~aPE~~~~~-~~~~~~DiwslG~il~~l~~g~~p~~~~  272 (351)
                            .++.++|+|||.+.........  .......++..|+|||.+.+. .++.++||||+|+++|+|++|..||...
T Consensus       154 ------~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~el~t~~~~~~~~  227 (310)
T cd07865         154 ------KDGILKLADFGLARAFSLSKNSKPNRYTNRVVTLWYRPPELLLGERDYGPPIDMWGAGCIMAEMWTRSPIMQGN  227 (310)
T ss_pred             ------CCCcEEECcCCCcccccCCcccCCCCccCcccCccccCcHHhcCCcccCchhhhHHHHHHHHHHHhCCCCCCCC
Confidence                  7788999999988654322111  122334567889999988654 4678999999999999999999888643


Q ss_pred             cCCCC--------Cc-----------ee-----eecCc---chh----hhhHHHHHHHHHHHHhcCCCCCChHHHHHHHH
Q 018699          273 KASPD--------GG-----------LV-----YLPKL---SFK----RYWKVELWKSLFTNLLNMSSGNDKEVLQNLQK  321 (351)
Q Consensus       273 ~~~~~--------~~-----------~~-----~~~~~---~~~----~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~~  321 (351)
                      .....        +.           ..     ..+..   ..+    ....+..+.+||.+||..||.+||++++++.|
T Consensus       228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~dli~~~l~~~P~~R~t~~e~l~h  307 (310)
T cd07865         228 TEQHQLTLISQLCGSITPEVWPGVDKLELFKKMELPQGQKRKVKERLKPYVKDPHALDLIDKLLVLDPAKRIDADTALNH  307 (310)
T ss_pred             CHHHHHHHHHHHhCCCChhhcccccchhhhhhccCCCccchhhHHhcccccCCHHHHHHHHHHhcCChhhccCHHHHhcC
Confidence            32100        00           00     00000   000    00112567899999999999999999999999


Q ss_pred             HH
Q 018699          322 SF  323 (351)
Q Consensus       322 ~~  323 (351)
                      +|
T Consensus       308 ~~  309 (310)
T cd07865         308 DF  309 (310)
T ss_pred             CC
Confidence            86

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl

>KOG4645 consensus MAPKKK (MAP kinase kinase kinase) SSK2 and related serine/threonine protein kinases [Signal transduction mechanisms]

Probab=100.00  E-value=6.7e-39  Score=312.59  Aligned_cols=260  Identities=18%  Similarity=0.190  Sum_probs=214.0

Q ss_pred             eeEEEEEEeeccCceEEEEEEecCCCCceEEEEecCCCC--ChHHHHHHHHHhhhccccccccccceeeecccCeeEEEE
Q 018699           48 KKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAF--PWEFYMYRQLDQRISGRERSSFGFAHRIHLYSDYSILVC  125 (351)
Q Consensus        48 ~~Y~i~~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~--~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~  125 (351)
                      -+++-..+||.|.||.||-|. +..+|+..|+|.+.-..  ........+....+..+.|++++...++...++..++.|
T Consensus      1235 ~rWqrg~~Ig~G~fG~VYtav-N~~tGellAvKEI~iq~~~~k~~~~i~eEm~vlE~lnHpNlV~YyGVEvHRekv~IFM 1313 (1509)
T KOG4645|consen 1235 FRWQRGNFIGGGTFGKVYTAV-NLDTGELLAVKEIKIQDSDHKTFKLIAEEMKVLEGLNHPNLVRYYGVEVHREKVYIFM 1313 (1509)
T ss_pred             eeeccccccCCcceeeeEEee-cCCccchhhhhhhhcCccccccCcchHHHHHHHHhccCccccccCceeecHHHHHHHH
Confidence            378889999999999999999 78999999999765221  111222233334455678889999999999999999999


Q ss_pred             EecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeeccCCCCCcccCC
Q 018699          126 DYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSGPWQDQG  205 (351)
Q Consensus       126 e~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~~~~~~~~~~  205 (351)
                      |||++|+|.+.++.    ++-.++.....+..|++.|++|||++|||||||||+||+++                 .+|.
T Consensus      1314 EyC~~GsLa~ll~~----gri~dE~vt~vyt~qll~gla~LH~~gIVHRDIK~aNI~Ld-----------------~~g~ 1372 (1509)
T KOG4645|consen 1314 EYCEGGSLASLLEH----GRIEDEMVTRVYTKQLLEGLAYLHEHGIVHRDIKPANILLD-----------------FNGL 1372 (1509)
T ss_pred             HHhccCcHHHHHHh----cchhhhhHHHHHHHHHHHHHHHHHhcCceecCCCccceeee-----------------cCCc
Confidence            99999999999988    57788888999999999999999999999999999999999                 7889


Q ss_pred             eEEeecCCccccccCCC--CccccccccCCCcccceeccCC---CCCccchHhHHHHHHHHHHhCccccccccCC--CCC
Q 018699          206 LCLVDWGRGIDLHLFPD--NMEFEGDCRTSGFRCIEMQEKK---PWKFQVDTYGLCAIVHMMLHNSYMEIEKKAS--PDG  278 (351)
Q Consensus       206 ~~l~Dfg~a~~~~~~~~--~~~~~~~~g~~~y~aPE~~~~~---~~~~~~DiwslG~il~~l~~g~~p~~~~~~~--~~~  278 (351)
                      +|++|||.|..+.....  ........||+.|||||++.+.   .-.-++|||||||+..||+||+-||...+..  ..+
T Consensus      1373 iK~~DFGsa~ki~~~~~~~~~el~~~~GT~~YMAPEvit~t~~kG~~~A~DiWslGCVVlEM~tGkrPW~~~dne~aIMy 1452 (1509)
T KOG4645|consen 1373 IKYGDFGSAVKIKNNAQTMPGELQSMMGTPMYMAPEVITGTKGKGHGGAADIWSLGCVVLEMATGKRPWAELDNEWAIMY 1452 (1509)
T ss_pred             EEeecccceeEecCchhcCCHHHHhhcCCchhcCchhhcccccCCCCcchhhhcccceEEEeecCCCchhhccchhHHHh
Confidence            99999999987553321  2345677899999999999653   3458999999999999999999999865543  123


Q ss_pred             ceeeecCcchhhhhHHHHHHHHHHHHhcCCCCCChHHHHHHHHHHHHHHhhC
Q 018699          279 GLVYLPKLSFKRYWKVELWKSLFTNLLNMSSGNDKEVLQNLQKSFQDYLCSN  330 (351)
Q Consensus       279 ~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~~~~~~~~~~~  330 (351)
                      ++.....+++|+..+ ...++||.+||..||..|.++.|++.|.|-+.-.++
T Consensus      1453 ~V~~gh~Pq~P~~ls-~~g~dFle~Cl~~dP~~Rw~~~qlle~~f~~~~~d~ 1503 (1509)
T KOG4645|consen 1453 HVAAGHKPQIPERLS-SEGRDFLEHCLEQDPKMRWTASQLLEHAFGKSCTDE 1503 (1509)
T ss_pred             HHhccCCCCCchhhh-HhHHHHHHHHHhcCchhhhHHHHHHHhhcccccccc
Confidence            444567778888877 889999999999999999999999999986654433

>cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=2.2e-37  Score=272.30  Aligned_cols=242  Identities=21%  Similarity=0.139  Sum_probs=185.6

Q ss_pred             EEeeccCceEEEEEEecCCCCceEEEEecCCCCChHHHHH----HHHHhhhccccccccccceeeecccCeeEEEEEecC
Q 018699           54 GCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFPWEFYMY----RQLDQRISGRERSSFGFAHRIHLYSDYSILVCDYLS  129 (351)
Q Consensus        54 ~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~~~e~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~  129 (351)
                      +.||.|++|.||+|. +..+++.||+|.+.+.........    .+.........+++++.....+..++..|+|+||++
T Consensus         2 ~~l~~g~~~~v~~a~-~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~   80 (260)
T cd05611           2 KPISKGAFGSVYLAK-KRSTGDYFAIKVLKKSDMIAKNQVTNVKAERAIMMIQGESPYVAKLYYSFQSKDYLYLVMEYLN   80 (260)
T ss_pred             ccCCcCCCeeEEEEE-ecCCCCeEEEEEecchhhhHHHHHHHHHHHHHHHhhcCCCCCeeeeeeeEEcCCeEEEEEeccC
Confidence            579999999999999 567789999999875432221111    111122233467788888877777889999999999


Q ss_pred             CCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeeccCCCCCcccCCeEEe
Q 018699          130 QGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSGPWQDQGLCLV  209 (351)
Q Consensus       130 ~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~~~~~~~~~~~~l~  209 (351)
                      +++|.+++..    ...+++..+..++.|++.||.|||+.+++|+||+|+||+++                 .++.++|+
T Consensus        81 ~~~L~~~l~~----~~~~~~~~~~~i~~qi~~aL~~lH~~~i~H~dl~p~nil~~-----------------~~~~~~l~  139 (260)
T cd05611          81 GGDCASLIKT----LGGLPEDWAKQYIAEVVLGVEDLHQRGIIHRDIKPENLLID-----------------QTGHLKLT  139 (260)
T ss_pred             CCCHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEEC-----------------CCCcEEEe
Confidence            9999999987    46789999999999999999999999999999999999999                 66779999


Q ss_pred             ecCCccccccCCCCccccccccCCCcccceeccCCCCCccchHhHHHHHHHHHHhCccccccccCCCCCce----eeecC
Q 018699          210 DWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQEKKPWKFQVDTYGLCAIVHMMLHNSYMEIEKKASPDGGL----VYLPK  285 (351)
Q Consensus       210 Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~p~~~~~~~~~~~~----~~~~~  285 (351)
                      |||.+.....      .....++..|+|||.+.+..++.++||||+|+++|+|++|..||...........    .....
T Consensus       140 dfg~~~~~~~------~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~  213 (260)
T cd05611         140 DFGLSRNGLE------NKKFVGTPDYLAPETILGVGDDKMSDWWSLGCVIFEFLFGYPPFHAETPDAVFDNILSRRINWP  213 (260)
T ss_pred             ecccceeccc------cccCCCCcCccChhhhcCCCCcchhhhHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHhcccCCC
Confidence            9998754221      2234578899999999888889999999999999999999999864432210000    00011


Q ss_pred             cchhhhhHHHHHHHHHHHHhcCCCCCChH---HHHHHHHHHH
Q 018699          286 LSFKRYWKVELWKSLFTNLLNMSSGNDKE---VLQNLQKSFQ  324 (351)
Q Consensus       286 ~~~~~~~~~~~~~~li~~~L~~dP~~R~s---~~e~l~~~~~  324 (351)
                      .......+ ..+.++|.+||+.||++||+   +.|++.|||.
T Consensus       214 ~~~~~~~~-~~~~~~i~~~l~~~p~~R~~~~~~~~~l~~~~~  254 (260)
T cd05611         214 EEVKEFCS-PEAVDLINRLLCMDPAKRLGANGYQEIKSHPFF  254 (260)
T ss_pred             CcccccCC-HHHHHHHHHHccCCHHHccCCCcHHHHHcChHh
Confidence            11112233 78999999999999999995   4799999864

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do

>cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2

Probab=100.00  E-value=4.1e-37  Score=276.94  Aligned_cols=261  Identities=12%  Similarity=0.081  Sum_probs=191.3

Q ss_pred             EEEEcCeeEEEEEEeeccCceEEEEEEec------CCCCceEEEEecCCCCCh-HH-HHHHHHHhhhccc-cccccccce
Q 018699           42 TIEIGGKKYQIKGCAGQGGFAKVFKAYVN------GDPEDVVALKIQKPAFPW-EF-YMYRQLDQRISGR-ERSSFGFAH  112 (351)
Q Consensus        42 ~~~i~~~~Y~i~~~lg~G~~g~V~~a~~~------~~~~~~vaiK~~~~~~~~-e~-~~~~~~~~~~~~~-~~~~~~~~~  112 (351)
                      .+++..++|.+.+.||+|+||.||+|++.      ...+..||+|.+...... +. ....++. ..... .|+++....
T Consensus         9 ~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~-~l~~l~~h~~i~~~~   87 (304)
T cd05101           9 RWEFSRDKLTLGKPLGEGCFGQVVMAEALGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEME-MMKMIGKHKNIINLL   87 (304)
T ss_pred             cccccHHHeeecceeeccCCceEEEEEEeccCCCCCCcceeEEeeecccccchHHHHHHHHHHH-HHHhhccCCCchhee
Confidence            45677899999999999999999999741      123458999998754322 11 1222222 22223 577888888


Q ss_pred             eeecccCeeEEEEEecCCCCHHHHHHHHHhh------------CCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCc
Q 018699          113 RIHLYSDYSILVCDYLSQGTLQDAINSYVVI------------GKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDN  180 (351)
Q Consensus       113 ~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~~------------~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~N  180 (351)
                      ..+...+..++||||+++++|.+++......            ...++...+..++.||+.|+.|||++|++|+||||+|
T Consensus        88 ~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~givH~dlkp~N  167 (304)
T cd05101          88 GACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDIARVPDEQMTFKDLVSCTYQVARGMEYLASQKCIHRDLAARN  167 (304)
T ss_pred             EEEecCCceEEEEecCCCCcHHHHHHhcCCcccccccccccCCcccccHHHHHHHHHHHHHHHHHHHHCCeeecccccce
Confidence            8887788899999999999999999864210            1346778899999999999999999999999999999


Q ss_pred             EEEeecCCcceeeccCCCCCcccCCeEEeecCCccccccCCCCccccccccCCCcccceeccCCCCCccchHhHHHHHHH
Q 018699          181 LLIRYARDELTVLDHDRSGPWQDQGLCLVDWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQEKKPWKFQVDTYGLCAIVH  260 (351)
Q Consensus       181 ill~~~~~~~~~~~~~~~~~~~~~~~~l~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~  260 (351)
                      |+++                 .++.++|+|||.+................++..|+|||.+.+..++.++||||||+++|
T Consensus       168 ili~-----------------~~~~~kl~D~g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~  230 (304)
T cd05101         168 VLVT-----------------ENNVMKIADFGLARDVNNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMW  230 (304)
T ss_pred             EEEc-----------------CCCcEEECCCccceecccccccccccCCCCCceeeCchhhccCCCCchhhHHHHHHHHH
Confidence            9998                 67789999999986543221111122234567899999998888999999999999999


Q ss_pred             HHHh-CccccccccCCCCCce-eeecCcchhhhhHHHHHHHHHHHHhcCCCCCChHHHHHHHH
Q 018699          261 MMLH-NSYMEIEKKASPDGGL-VYLPKLSFKRYWKVELWKSLFTNLLNMSSGNDKEVLQNLQK  321 (351)
Q Consensus       261 ~l~~-g~~p~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~~  321 (351)
                      +|++ |..||........... ........+...+ ..+.+||.+||..+|++||++.+++..
T Consensus       231 el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~li~~cl~~~p~~Rps~~e~l~~  292 (304)
T cd05101         231 EIFTLGGSPYPGIPVEELFKLLKEGHRMDKPANCT-NELYMMMRDCWHAIPSHRPTFKQLVED  292 (304)
T ss_pred             HHHcCCCCCcccCCHHHHHHHHHcCCcCCCCCCCC-HHHHHHHHHHcccChhhCCCHHHHHHH
Confidence            9998 7777754322110000 0011111222233 788999999999999999999999876

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains

Probab=100.00  E-value=4.8e-37  Score=269.22  Aligned_cols=252  Identities=15%  Similarity=0.120  Sum_probs=197.2

Q ss_pred             eEEEEEEeeccCceEEEEEEecCCCCceEEEEecCCCCChHHHHHH--HHHhhhccccccccccceeeecccCeeEEEEE
Q 018699           49 KYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFPWEFYMYR--QLDQRISGRERSSFGFAHRIHLYSDYSILVCD  126 (351)
Q Consensus        49 ~Y~i~~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~~~e~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e  126 (351)
                      +|++.+.||.|++|.||+|. +..+++.+++|.+............  ..........+++++............++|+|
T Consensus         1 ~y~~~~~i~~g~~~~v~~~~-~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e   79 (256)
T cd08530           1 DFKVLKKLGKGSYGSVYKVK-RLSDNQFYALKEVDLGSMSQKEREDAVNEIRILASVNHPNIISYKEAFLDGNKLCIVME   79 (256)
T ss_pred             CceEeeeecCCCceeEEEEE-ECCCCCEEEEEEEehhhccHHHHHHHHHHHHHHHhCCCCCchhhhhhhccCCEEEEEeh
Confidence            58999999999999999999 5677899999998764433222211  11123344457788888877777889999999


Q ss_pred             ecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeeccCCCCCcccCCe
Q 018699          127 YLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSGPWQDQGL  206 (351)
Q Consensus       127 ~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~~~~~~~~~~~  206 (351)
                      |+++++|.+++......+..+++..++.++.|++.|+++||+.|++|+||+|+||+++                 .++.+
T Consensus        80 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lh~~~i~h~~l~~~ni~~~-----------------~~~~~  142 (256)
T cd08530          80 YAPFGDLSKAISKRKKKRKLIPEQEIWRIFIQLLRGLQALHEQKILHRDLKSANILLV-----------------ANDLV  142 (256)
T ss_pred             hcCCCCHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCcceEEEe-----------------cCCcE
Confidence            9999999999887554456789999999999999999999999999999999999999                 66779


Q ss_pred             EEeecCCccccccCCCCccccccccCCCcccceeccCCCCCccchHhHHHHHHHHHHhCccccccccCCCC-CceeeecC
Q 018699          207 CLVDWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQEKKPWKFQVDTYGLCAIVHMMLHNSYMEIEKKASPD-GGLVYLPK  285 (351)
Q Consensus       207 ~l~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~p~~~~~~~~~-~~~~~~~~  285 (351)
                      +|+|||.+......    ......++..|++||.+.+..++.++|+||||+++|+|++|..||........ ........
T Consensus       143 kl~d~g~~~~~~~~----~~~~~~~~~~~~~Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~  218 (256)
T cd08530         143 KIGDLGISKVLKKN----MAKTQIGTPHYMAPEVWKGRPYSYKSDIWSLGCLLYEMATFAPPFEARSMQDLRYKVQRGKY  218 (256)
T ss_pred             EEeeccchhhhccC----CcccccCCccccCHHHHCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCC
Confidence            99999988654321    22334578899999999888889999999999999999999999865443200 00011111


Q ss_pred             cchhhhhHHHHHHHHHHHHhcCCCCCChHHHHHHHHHH
Q 018699          286 LSFKRYWKVELWKSLFTNLLNMSSGNDKEVLQNLQKSF  323 (351)
Q Consensus       286 ~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~~~~  323 (351)
                      ...+..++ ..++++|.+||..+|++||++.++++||+
T Consensus       219 ~~~~~~~~-~~~~~li~~~l~~~p~~Rp~~~~~l~~p~  255 (256)
T cd08530         219 PPIPPIYS-QDLQNFIRSMLQVKPKLRPNCDKILASPA  255 (256)
T ss_pred             CCCchhhC-HHHHHHHHHHcCCCcccCCCHHHHhcCCC
Confidence            22333444 78999999999999999999999999975

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an

>KOG0983 consensus Mitogen-activated protein kinase (MAPK) kinase MKK7/JNKK2 [Signal transduction mechanisms]

Probab=100.00  E-value=4.6e-38  Score=261.10  Aligned_cols=257  Identities=17%  Similarity=0.204  Sum_probs=200.1

Q ss_pred             eEEEEc-CeeE-------EEEEEeeccCceEEEEEEecCCCCceEEEEecCCCCChH--HHHHHHHHhhhcccccccccc
Q 018699           41 KTIEIG-GKKY-------QIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFPWE--FYMYRQLDQRISGRERSSFGF  110 (351)
Q Consensus        41 ~~~~i~-~~~Y-------~i~~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~~~e--~~~~~~~~~~~~~~~~~~~~~  110 (351)
                      -.+++. |++|       +++..||.|+.|+||+++ ...+|...|||.+.+....|  .+++..+.-....-..+.++.
T Consensus        77 g~lti~~g~r~~~dindl~~l~dlGsGtcG~V~k~~-~rs~~~iiAVK~M~rt~Nkee~kRILmDldvv~~s~dcpyIV~  155 (391)
T KOG0983|consen   77 GYLTIGGGQRYQADINDLENLGDLGSGTCGQVWKMR-FRSTGHIIAVKQMRRTGNKEENKRILMDLDVVLKSHDCPYIVQ  155 (391)
T ss_pred             eeEEecCCcccccChHHhhhHHhhcCCCccceEEEE-EcccceEEEEEeecccCCHHHHHHHHHhhhHHhhccCCCeeee
Confidence            356665 5555       467889999999999999 57889999999988764433  344444444333334677888


Q ss_pred             ceeeecccCeeEEEEEecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHC-CceecCCCCCcEEEeecCCc
Q 018699          111 AHRIHLYSDYSILVCDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDV-GIIHGDFKPDNLLIRYARDE  189 (351)
Q Consensus       111 ~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~-~i~H~dl~p~Nill~~~~~~  189 (351)
                      ...++......++.||.+ +.-++.++.+.   ..++++..+-.+...++.||.||-++ ||+|||+||+||++|     
T Consensus       156 c~GyFi~n~dV~IcMelM-s~C~ekLlkri---k~piPE~ilGk~tva~v~AL~YLKeKH~viHRDvKPSNILlD-----  226 (391)
T KOG0983|consen  156 CFGYFITNTDVFICMELM-STCAEKLLKRI---KGPIPERILGKMTVAIVKALYYLKEKHGVIHRDVKPSNILLD-----  226 (391)
T ss_pred             eeeEEeeCchHHHHHHHH-HHHHHHHHHHh---cCCchHHhhhhhHHHHHHHHHHHHHhcceeecccCccceEEc-----
Confidence            888888788888889988 65677777665   57899999999999999999999965 999999999999999     


Q ss_pred             ceeeccCCCCCcccCCeEEeecCCccccccCCCCccccccccCCCcccceecc---CCCCCccchHhHHHHHHHHHHhCc
Q 018699          190 LTVLDHDRSGPWQDQGLCLVDWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQE---KKPWKFQVDTYGLCAIVHMMLHNS  266 (351)
Q Consensus       190 ~~~~~~~~~~~~~~~~~~l~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~---~~~~~~~~DiwslG~il~~l~~g~  266 (351)
                                  ..|++||||||++..+.   +........|.+.|||||.+.   ...|+.++||||||++++||.||.
T Consensus       227 ------------e~GniKlCDFGIsGrlv---dSkAhtrsAGC~~YMaPERidp~~~~kYDiRaDVWSlGITlveLaTg~  291 (391)
T KOG0983|consen  227 ------------ERGNIKLCDFGISGRLV---DSKAHTRSAGCAAYMAPERIDPPDKPKYDIRADVWSLGITLVELATGQ  291 (391)
T ss_pred             ------------cCCCEEeecccccceee---cccccccccCCccccCccccCCCCCCccchhhhhhhhccchhhhhccc
Confidence                        88999999999985433   344455667899999999984   456889999999999999999999


Q ss_pred             cccccccCCC-CCce---eeecCcchhhhhHHHHHHHHHHHHhcCCCCCChHHHHHHHHHH
Q 018699          267 YMEIEKKASP-DGGL---VYLPKLSFKRYWKVELWKSLFTNLLNMSSGNDKEVLQNLQKSF  323 (351)
Q Consensus       267 ~p~~~~~~~~-~~~~---~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~~~~  323 (351)
                      +||..-...- ....   ..++..+....++ +.+.+|+..||.+|+.+||.-.++|+|+|
T Consensus       292 yPy~~c~tdFe~ltkvln~ePP~L~~~~gFS-p~F~~fv~~CL~kd~r~RP~Y~~Ll~h~F  351 (391)
T KOG0983|consen  292 YPYKGCKTDFEVLTKVLNEEPPLLPGHMGFS-PDFQSFVKDCLTKDHRKRPKYNKLLEHPF  351 (391)
T ss_pred             CCCCCCCccHHHHHHHHhcCCCCCCcccCcC-HHHHHHHHHHhhcCcccCcchHHHhcCcc
Confidence            9997633221 0000   1123333333366 89999999999999999999999999988

>cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=7.2e-37  Score=271.54  Aligned_cols=254  Identities=18%  Similarity=0.198  Sum_probs=192.6

Q ss_pred             eEEEEEEeeccCceEEEEEEecCCCCceEEEEecCCCCCh-HH-HHHHH--HHhhhccccccccccceeeecccCeeEEE
Q 018699           49 KYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFPW-EF-YMYRQ--LDQRISGRERSSFGFAHRIHLYSDYSILV  124 (351)
Q Consensus        49 ~Y~i~~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~~~-e~-~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~lv  124 (351)
                      .|++.+.||+|++|.||+|. +..+++.||+|.+...... .. ....+  +...+....++++......+..+...++|
T Consensus         2 ~y~~~~~l~~g~~g~v~~~~-~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~vi~~~~~~~~~~~~~lv   80 (277)
T cd06917           2 LYQRLELIGRGAYGAVYRGK-HVPTGRVVALKIINLDTPDDDVSDIQREVALLSQLRQSQPPNITKYYGSYLKGPRLWII   80 (277)
T ss_pred             hhhhhhheeccCCceEEEEE-EcCCCcEEEEEEecCCCCchhHHHHHHHHHHHHHhccCCCCCeeeEeeeeeeCCEEEEE
Confidence            48889999999999999999 4677899999998654221 11 12122  22223223467777777777778889999


Q ss_pred             EEecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeeccCCCCCcccC
Q 018699          125 CDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSGPWQDQ  204 (351)
Q Consensus       125 ~e~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~~~~~~~~~  204 (351)
                      |||+++++|.+++..     ..+++..++.++.|++.|+.|||+.|++|+||+|+||+++                 .++
T Consensus        81 ~e~~~~~~L~~~~~~-----~~l~~~~~~~i~~~i~~~l~~lh~~~i~H~dl~p~ni~i~-----------------~~~  138 (277)
T cd06917          81 MEYAEGGSVRTLMKA-----GPIAEKYISVIIREVLVALKYIHKVGVIHRDIKAANILVT-----------------NTG  138 (277)
T ss_pred             EecCCCCcHHHHHHc-----cCCCHHHHHHHHHHHHHHHHHHHhCCcccCCcCHHHEEEc-----------------CCC
Confidence            999999999998865     4789999999999999999999999999999999999999                 677


Q ss_pred             CeEEeecCCccccccCCCCccccccccCCCcccceeccC-CCCCccchHhHHHHHHHHHHhCccccccccCCCCCceee-
Q 018699          205 GLCLVDWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQEK-KPWKFQVDTYGLCAIVHMMLHNSYMEIEKKASPDGGLVY-  282 (351)
Q Consensus       205 ~~~l~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~~DiwslG~il~~l~~g~~p~~~~~~~~~~~~~~-  282 (351)
                      .++|+|||.+......  ........|+..|+|||.+.+ ..++.++|+|||||++|+|++|..||............. 
T Consensus       139 ~~~l~dfg~~~~~~~~--~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~~~~~~~~~~  216 (277)
T cd06917         139 NVKLCDFGVAALLNQN--SSKRSTFVGTPYWMAPEVITEGKYYDTKADIWSLGITIYEMATGNPPYSDVDAFRAMMLIPK  216 (277)
T ss_pred             CEEEccCCceeecCCC--ccccccccCCcceeCHHHhccCCccccchhHHHHHHHHHHHHhCCCCCCCCChhhhhhcccc
Confidence            8999999988653321  122233468889999998864 456899999999999999999999997554321111110 


Q ss_pred             ecCcchhhh-hHHHHHHHHHHHHhcCCCCCChHHHHHHHHHHHHHHh
Q 018699          283 LPKLSFKRY-WKVELWKSLFTNLLNMSSGNDKEVLQNLQKSFQDYLC  328 (351)
Q Consensus       283 ~~~~~~~~~-~~~~~~~~li~~~L~~dP~~R~s~~e~l~~~~~~~~~  328 (351)
                      .....++.. +. ..+.++|.+||+.||++||++.+++.|+|..-..
T Consensus       217 ~~~~~~~~~~~~-~~~~~~i~~~l~~~p~~R~~~~~il~~~~~~~~~  262 (277)
T cd06917         217 SKPPRLEDNGYS-KLLREFVAACLDEEPKERLSAEELLKSKWIKAHS  262 (277)
T ss_pred             CCCCCCCcccCC-HHHHHHHHHHcCCCcccCcCHHHHhhChHhhccc
Confidence            111122221 33 7899999999999999999999999998764433

Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent

>PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity

Probab=100.00  E-value=2.3e-37  Score=272.21  Aligned_cols=251  Identities=19%  Similarity=0.204  Sum_probs=184.1

Q ss_pred             EEEEEeeccCceEEEEEEec---CCCCceEEEEecCCCCChH-HHHHHHHHhhhccccccccccceeeecccCeeEEEEE
Q 018699           51 QIKGCAGQGGFAKVFKAYVN---GDPEDVVALKIQKPAFPWE-FYMYRQLDQRISGRERSSFGFAHRIHLYSDYSILVCD  126 (351)
Q Consensus        51 ~i~~~lg~G~~g~V~~a~~~---~~~~~~vaiK~~~~~~~~e-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e  126 (351)
                      .+.+.||.|+||.||+|.+.   ...+..|+||.+......+ ...+......+....|++++.+.++....+..++|+|
T Consensus         2 ~~~~~ig~G~fg~v~~~~~~~~~~~~~~~V~vk~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~g~~~~~~~~~lv~e   81 (259)
T PF07714_consen    2 KLIKQIGEGSFGKVYRAEWKQKDNDKNQPVAVKILKPSSSEEEEEEFLNEIQILRKLRHPNIVKLYGFCIENEPLFLVME   81 (259)
T ss_dssp             EEEEEEEEESSEEEEEEEEESTTTSSEEEEEEEEESTTSSHHHHHHHHHHHHHHHTHSBTTBE-EEEEEESSSSEEEEEE
T ss_pred             EEeeEEccCCCcEEEEEEEEcccCCCCEEEEEEEeccccccccceeeeeccccccccccccccccccccccccccccccc
Confidence            57899999999999999985   2446789999996643332 2333333344445588999999998887778999999


Q ss_pred             ecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeeccCCCCCcccCCe
Q 018699          127 YLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSGPWQDQGL  206 (351)
Q Consensus       127 ~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~~~~~~~~~~~  206 (351)
                      |+++|+|.+++....  ...+++..+..|+.|++.|+.|||+++++|++|+++||+++                 .++.+
T Consensus        82 ~~~~g~L~~~L~~~~--~~~~~~~~~~~i~~~i~~~l~~Lh~~~iiH~~l~~~nill~-----------------~~~~~  142 (259)
T PF07714_consen   82 YCPGGSLDDYLKSKN--KEPLSEQQRLSIAIQIAEALSYLHSNNIIHGNLSPSNILLD-----------------SNGQV  142 (259)
T ss_dssp             --TTEBHHHHHHHTC--TTTSBHHHHHHHHHHHHHHHHHHHHTTEEEST-SGGGEEEE-----------------TTTEE
T ss_pred             ccccccccccccccc--ccccccccccccccccccccccccccccccccccccccccc-----------------ccccc
Confidence            999999999998841  25789999999999999999999999999999999999999                 77889


Q ss_pred             EEeecCCccccccCCCCccccccccCCCcccceeccCCCCCccchHhHHHHHHHHHHh-CccccccccCCCC-Cceeeec
Q 018699          207 CLVDWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQEKKPWKFQVDTYGLCAIVHMMLH-NSYMEIEKKASPD-GGLVYLP  284 (351)
Q Consensus       207 ~l~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~-g~~p~~~~~~~~~-~~~~~~~  284 (351)
                      ||+|||++....................|+|||.+.+..++.++||||||+++||+++ |..||........ .......
T Consensus       143 Kl~~f~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVysfG~~l~ei~~~~~~p~~~~~~~~~~~~~~~~~  222 (259)
T PF07714_consen  143 KLSDFGLSRPISEKSKYKNDSSQQLPLRYLAPEVLKDGEYTKKSDVYSFGMLLYEILTLGKFPFSDYDNEEIIEKLKQGQ  222 (259)
T ss_dssp             EEESTTTGEETTTSSSEEESTTSESGGGGS-HHHHHHSEESHHHHHHHHHHHHHHHHTTSSGTTTTSCHHHHHHHHHTTE
T ss_pred             cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence            9999999865421111111222345678999999988889999999999999999999 6788764322210 0000111


Q ss_pred             CcchhhhhHHHHHHHHHHHHhcCCCCCChHHHHHHHH
Q 018699          285 KLSFKRYWKVELWKSLFTNLLNMSSGNDKEVLQNLQK  321 (351)
Q Consensus       285 ~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~~  321 (351)
                      ....+..++ ..+.++|.+||..||++||++.++++.
T Consensus       223 ~~~~~~~~~-~~~~~li~~C~~~~p~~RPs~~~i~~~  258 (259)
T PF07714_consen  223 RLPIPDNCP-KDIYSLIQQCWSHDPEKRPSFQEILQE  258 (259)
T ss_dssp             ETTSBTTSB-HHHHHHHHHHT-SSGGGS--HHHHHHH
T ss_pred             cceeccchh-HHHHHHHHHHcCCChhhCcCHHHHHhc
Confidence            122333344 778999999999999999999999863

Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A ....

>cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes

Probab=100.00  E-value=6.6e-37  Score=269.37  Aligned_cols=252  Identities=12%  Similarity=0.092  Sum_probs=184.6

Q ss_pred             EEcCeeEEEEEEeeccCceEEEEEEecCCCCceEEEEecCCCCChHHHHHHHHHhhhccccccccccceeeecccCeeEE
Q 018699           44 EIGGKKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFPWEFYMYRQLDQRISGRERSSFGFAHRIHLYSDYSIL  123 (351)
Q Consensus        44 ~i~~~~Y~i~~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  123 (351)
                      ++..++|++.+.||.|++|.||+|.+ .. +..+|+|.+............++ .......++++........ .+..++
T Consensus         2 ~~~~~~~~~~~~ig~g~~~~v~~~~~-~~-~~~~~lK~~~~~~~~~~~~~~E~-~~l~~l~h~~i~~~~~~~~-~~~~~~   77 (260)
T cd05069           2 EIPRESLRLDVKLGQGCFGEVWMGTW-NG-TTKVAIKTLKPGTMMPEAFLQEA-QIMKKLRHDKLVPLYAVVS-EEPIYI   77 (260)
T ss_pred             cCChHHeeeeeeecCcCCCeEEEEEE-cC-CceEEEEEcccCCccHHHHHHHH-HHHHhCCCCCeeeEEEEEc-CCCcEE
Confidence            35567899999999999999999985 33 34689998776543322222221 2233345666666655543 556799


Q ss_pred             EEEecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeeccCCCCCccc
Q 018699          124 VCDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSGPWQD  203 (351)
Q Consensus       124 v~e~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~~~~~~~~  203 (351)
                      +|||+.+++|.+++....  +..+++..+..++.|++.|+.|||+.|++|+||+|+||+++                 .+
T Consensus        78 v~e~~~~~~L~~~~~~~~--~~~~~~~~~~~~~~~l~~al~~lH~~~i~H~dl~~~Nill~-----------------~~  138 (260)
T cd05069          78 VTEFMGKGSLLDFLKEGD--GKYLKLPQLVDMAAQIADGMAYIERMNYIHRDLRAANILVG-----------------DN  138 (260)
T ss_pred             EEEcCCCCCHHHHHhhCC--CCCCCHHHHHHHHHHHHHHHHHHHhCCEeecccCcceEEEc-----------------CC
Confidence            999999999999997632  34578899999999999999999999999999999999999                 67


Q ss_pred             CCeEEeecCCccccccCCCCccccccccCCCcccceeccCCCCCccchHhHHHHHHHHHHh-CccccccccCCCCCc-ee
Q 018699          204 QGLCLVDWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQEKKPWKFQVDTYGLCAIVHMMLH-NSYMEIEKKASPDGG-LV  281 (351)
Q Consensus       204 ~~~~l~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~-g~~p~~~~~~~~~~~-~~  281 (351)
                      +.++|+|||.+...... .........++..|+|||...+..++.++||||||+++|+|++ |..||.......... ..
T Consensus       139 ~~~~l~dfg~~~~~~~~-~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~~~  217 (260)
T cd05069         139 LVCKIADFGLARLIEDN-EYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMVNREVLEQVE  217 (260)
T ss_pred             CeEEECCCccceEccCC-cccccCCCccchhhCCHHHhccCCcChHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHH
Confidence            78999999988643211 1111222345677999999988888999999999999999999 888886543221000 00


Q ss_pred             eecCcchhhhhHHHHHHHHHHHHhcCCCCCChHHHHHHH
Q 018699          282 YLPKLSFKRYWKVELWKSLFTNLLNMSSGNDKEVLQNLQ  320 (351)
Q Consensus       282 ~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~  320 (351)
                      .....+.+...+ ..+.+++.+||++||++||++.++++
T Consensus       218 ~~~~~~~~~~~~-~~~~~li~~~l~~~p~~Rp~~~~i~~  255 (260)
T cd05069         218 RGYRMPCPQGCP-ESLHELMKLCWKKDPDERPTFEYIQS  255 (260)
T ss_pred             cCCCCCCCcccC-HHHHHHHHHHccCCcccCcCHHHHHH
Confidence            011112222333 78999999999999999999988765

Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an

>cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2

Probab=100.00  E-value=1.5e-37  Score=276.74  Aligned_cols=259  Identities=11%  Similarity=0.054  Sum_probs=191.2

Q ss_pred             EcCeeEEEEEEeeccCceEEEEEEecC----CCCceEEEEecCCCCChHH-HHHHHHHhhhccccccccccceeeecccC
Q 018699           45 IGGKKYQIKGCAGQGGFAKVFKAYVNG----DPEDVVALKIQKPAFPWEF-YMYRQLDQRISGRERSSFGFAHRIHLYSD  119 (351)
Q Consensus        45 i~~~~Y~i~~~lg~G~~g~V~~a~~~~----~~~~~vaiK~~~~~~~~e~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  119 (351)
                      +...+|++.+.||.|+||.||+|.+..    ..++.||+|++........ ..+...........+++++....+....+
T Consensus         2 i~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~~   81 (283)
T cd05091           2 INLSTVRFMEELGEDRFGKVYKGHLFGTAPGEQTQAVAIKTLKDKAEGPLREEFKHEAMMRSRLQHPNIVCLLGVVTKEQ   81 (283)
T ss_pred             CCHHHHHHHHHhCCCCCCeEEEEEEecCCCCCceeEEEEEEccCCCCHHHHHHHHHHHHHHhcCCCCCcCeEEEEEcCCC
Confidence            345678999999999999999998522    2467899999876543221 22222223334556788888888888888


Q ss_pred             eeEEEEEecCCCCHHHHHHHHH------------hhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecC
Q 018699          120 YSILVCDYLSQGTLQDAINSYV------------VIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYAR  187 (351)
Q Consensus       120 ~~~lv~e~~~~~sL~~~l~~~~------------~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~  187 (351)
                      ..++++||+.+++|.+++....            .....+++..+..++.|++.|+.|||++||+||||||+||+++   
T Consensus        82 ~~~~~~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ql~~aL~~lH~~gi~H~dlkp~Nil~~---  158 (283)
T cd05091          82 PLSMIFSYCSHSDLHEFLVMRSPHSDVGSTDDDKTVKSTLEPADFVHIVTQIAAGMEFLSSHHVVHKDLATRNVLVF---  158 (283)
T ss_pred             ceEEEEEcCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHcCccccccchhheEec---
Confidence            8999999999999999986421            0023578888999999999999999999999999999999998   


Q ss_pred             CcceeeccCCCCCcccCCeEEeecCCccccccCCCCccccccccCCCcccceeccCCCCCccchHhHHHHHHHHHHh-Cc
Q 018699          188 DELTVLDHDRSGPWQDQGLCLVDWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQEKKPWKFQVDTYGLCAIVHMMLH-NS  266 (351)
Q Consensus       188 ~~~~~~~~~~~~~~~~~~~~l~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~-g~  266 (351)
                                    .++.++|+|||++................+++.|+|||.+.+..++.++|||||||++|+|++ |.
T Consensus       159 --------------~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~g~  224 (283)
T cd05091         159 --------------DKLNVKISDLGLFREVYAADYYKLMGNSLLPIRWMSPEAIMYGKFSIDSDIWSYGVVLWEVFSYGL  224 (283)
T ss_pred             --------------CCCceEecccccccccccchheeeccCccCCccccCHHHHhcCCCCcchhHHHHHHHHHHHHcCCC
Confidence                          667799999998765322111111223345678999999988888999999999999999998 77


Q ss_pred             cccccccCCCCCce-eeecCcchhhhhHHHHHHHHHHHHhcCCCCCChHHHHHHHH
Q 018699          267 YMEIEKKASPDGGL-VYLPKLSFKRYWKVELWKSLFTNLLNMSSGNDKEVLQNLQK  321 (351)
Q Consensus       267 ~p~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~~  321 (351)
                      .||........... ......+.+...+ ..+.+|+.+||+.+|.+||++.+++..
T Consensus       225 ~p~~~~~~~~~~~~i~~~~~~~~~~~~~-~~~~~li~~cl~~~p~~RP~~~~i~~~  279 (283)
T cd05091         225 QPYCGYSNQDVIEMIRNRQVLPCPDDCP-AWVYTLMLECWNEFPSRRPRFKDIHSR  279 (283)
T ss_pred             CCCCCCCHHHHHHHHHcCCcCCCCCCCC-HHHHHHHHHHhCCCcccCCCHHHHHHH
Confidence            78764332210000 0111122333344 778999999999999999999999864

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly

>cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1

Probab=100.00  E-value=1.3e-36  Score=272.84  Aligned_cols=252  Identities=12%  Similarity=0.116  Sum_probs=184.1

Q ss_pred             eeEEEEEEeeccCceEEEEEEecCCCC--ceEEEEecCCCCChH-H-HHHHHHHhhhccc-cccccccceeeecccCeeE
Q 018699           48 KKYQIKGCAGQGGFAKVFKAYVNGDPE--DVVALKIQKPAFPWE-F-YMYRQLDQRISGR-ERSSFGFAHRIHLYSDYSI  122 (351)
Q Consensus        48 ~~Y~i~~~lg~G~~g~V~~a~~~~~~~--~~vaiK~~~~~~~~e-~-~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~  122 (351)
                      ++|++.+.||.|+||.||+|++ ..++  ..+++|.+....... . ....++. .+... .|++++.........+..+
T Consensus         2 ~~~~~~~~lg~g~~g~v~~~~~-~~~~~~~~~~ik~~~~~~~~~~~~~~~~E~~-~l~~l~~hp~iv~~~~~~~~~~~~~   79 (297)
T cd05089           2 EDIKFEDVIGEGNFGQVIRAMI-KKDGLKMNAAIKMLKEFASENDHRDFAGELE-VLCKLGHHPNIINLLGACENRGYLY   79 (297)
T ss_pred             ccceeeeeecCCCcceEEEEEe-cCCCCcceeEEEEccccCCHHHHHHHHHHHH-HHHhhcCCCchhheEEEEccCCcce
Confidence            5799999999999999999985 3333  357888876432211 1 1222222 22223 5778888888887788899


Q ss_pred             EEEEecCCCCHHHHHHHHHh------------hCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcc
Q 018699          123 LVCDYLSQGTLQDAINSYVV------------IGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDEL  190 (351)
Q Consensus       123 lv~e~~~~~sL~~~l~~~~~------------~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~  190 (351)
                      +++||+++++|.+++.....            ....+++..++.++.|++.|++|||++|++|+||||+||+++      
T Consensus        80 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~lH~~~ivH~dlkp~Nill~------  153 (297)
T cd05089          80 IAIEYAPYGNLLDFLRKSRVLETDPAFAKEHGTASTLTSQQLLQFASDVATGMQYLSEKQFIHRDLAARNVLVG------  153 (297)
T ss_pred             EEEEecCCCcHHHHHHhccccccccccccccCccCCCCHHHHHHHHHHHHHHHHHHHHCCcccCcCCcceEEEC------
Confidence            99999999999999975310            013578899999999999999999999999999999999998      


Q ss_pred             eeeccCCCCCcccCCeEEeecCCccccccCCCCccccccccCCCcccceeccCCCCCccchHhHHHHHHHHHHh-Ccccc
Q 018699          191 TVLDHDRSGPWQDQGLCLVDWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQEKKPWKFQVDTYGLCAIVHMMLH-NSYME  269 (351)
Q Consensus       191 ~~~~~~~~~~~~~~~~~l~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~-g~~p~  269 (351)
                                 .++.++|+|||++......   ........+..|+|||.+.+..++.++|||||||++|+|++ |..||
T Consensus       154 -----------~~~~~kl~dfg~~~~~~~~---~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~el~t~g~~pf  219 (297)
T cd05089         154 -----------ENLASKIADFGLSRGEEVY---VKKTMGRLPVRWMAIESLNYSVYTTKSDVWSFGVLLWEIVSLGGTPY  219 (297)
T ss_pred             -----------CCCeEEECCcCCCccccce---eccCCCCcCccccCchhhccCCCCchhhHHHHHHHHHHHHcCCCCCC
Confidence                       6677999999987532110   01111122456999999988889999999999999999997 99998


Q ss_pred             ccccCCCCCc-eeeecCcchhhhhHHHHHHHHHHHHhcCCCCCChHHHHHHHHH
Q 018699          270 IEKKASPDGG-LVYLPKLSFKRYWKVELWKSLFTNLLNMSSGNDKEVLQNLQKS  322 (351)
Q Consensus       270 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~~~  322 (351)
                      .......... .........+..++ ..+.+||.+||..+|.+||+++++++..
T Consensus       220 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~li~~~l~~~p~~Rp~~~~i~~~l  272 (297)
T cd05089         220 CGMTCAELYEKLPQGYRMEKPRNCD-DEVYELMRQCWRDRPYERPPFAQISVQL  272 (297)
T ss_pred             CCCCHHHHHHHHhcCCCCCCCCCCC-HHHHHHHHHHcCCChhhCcCHHHHHHHH
Confidence            6543221000 00011112233344 7889999999999999999999998763

Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations.

>cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase

Probab=100.00  E-value=5.1e-37  Score=273.89  Aligned_cols=263  Identities=21%  Similarity=0.222  Sum_probs=203.7

Q ss_pred             CeeEEEEEEeeccCceEEEEEEecCCCCceEEEEecCCCCChHHHHHHHHHhhhccccccccccceeeecccCeeEEEEE
Q 018699           47 GKKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFPWEFYMYRQLDQRISGRERSSFGFAHRIHLYSDYSILVCD  126 (351)
Q Consensus        47 ~~~Y~i~~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e  126 (351)
                      .+.|++.+.||+|++|.||+|.+ ..+++.|++|++............++ .......++++......+...+..++|+|
T Consensus        18 ~~~~~~~~~l~~g~~~~v~~~~~-~~~~~~~~iK~~~~~~~~~~~~~~e~-~~l~~l~~~~i~~~~~~~~~~~~~~lv~e   95 (286)
T cd06614          18 RELYKNLEKIGEGASGEVYKATD-RATGKEVAIKKMRLRKQNKELIINEI-LIMKDCKHPNIVDYYDSYLVGDELWVVME   95 (286)
T ss_pred             cccchHhHhccCCCCeEEEEEEE-ccCCcEEEEEEEecCchhHHHHHHHH-HHHHHCCCCCeeEEEEEEEECCEEEEEEe
Confidence            45799999999999999999994 55688999999876543222222332 23344567788888888878899999999


Q ss_pred             ecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeeccCCCCCcccCCe
Q 018699          127 YLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSGPWQDQGL  206 (351)
Q Consensus       127 ~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~~~~~~~~~~~  206 (351)
                      |+++++|.+++...   ...++...+..++.|++.|+.+||+.|++|+||+|+||+++                 .++.+
T Consensus        96 ~~~~~~L~~~l~~~---~~~l~~~~~~~i~~~i~~~L~~lH~~gi~H~dl~p~ni~i~-----------------~~~~~  155 (286)
T cd06614          96 YMDGGSLTDIITQN---FVRMNEPQIAYVCREVLQGLEYLHSQNVIHRDIKSDNILLS-----------------KDGSV  155 (286)
T ss_pred             ccCCCcHHHHHHHh---ccCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCChhhEEEc-----------------CCCCE
Confidence            99999999999874   23799999999999999999999999999999999999999                 67789


Q ss_pred             EEeecCCccccccCCCCccccccccCCCcccceeccCCCCCccchHhHHHHHHHHHHhCccccccccCCCCCce---eee
Q 018699          207 CLVDWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQEKKPWKFQVDTYGLCAIVHMMLHNSYMEIEKKASPDGGL---VYL  283 (351)
Q Consensus       207 ~l~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~p~~~~~~~~~~~~---~~~  283 (351)
                      +|+|||.+......  ........++..|+|||.+.+..++.++|+||||+++|+|++|..||...........   ...
T Consensus       156 ~l~d~~~~~~~~~~--~~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slGvil~~l~~g~~p~~~~~~~~~~~~~~~~~~  233 (286)
T cd06614         156 KLADFGFAAQLTKE--KSKRNSVVGTPYWMAPEVIKRKDYGPKVDIWSLGIMCIEMAEGEPPYLREPPLRALFLITTKGI  233 (286)
T ss_pred             EECccchhhhhccc--hhhhccccCCcccCCHhHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCC
Confidence            99999987543211  1122334577889999999888889999999999999999999999875432210000   001


Q ss_pred             cCcchhhhhHHHHHHHHHHHHhcCCCCCChHHHHHHHHHHHHHHhhChHHH
Q 018699          284 PKLSFKRYWKVELWKSLFTNLLNMSSGNDKEVLQNLQKSFQDYLCSNPQLL  334 (351)
Q Consensus       284 ~~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~~~~~~~~~~~~~~~  334 (351)
                      +....+..++ ..+.++|.+||+++|.+||++.+++.|+|....|..+...
T Consensus       234 ~~~~~~~~~~-~~l~~li~~~l~~~p~~Rpt~~~il~~~~~~~~~~~~~~~  283 (286)
T cd06614         234 PPLKNPEKWS-PEFKDFLNKCLVKDPEKRPSAEELLQHPFLKKACPKEEFA  283 (286)
T ss_pred             CCCcchhhCC-HHHHHHHHHHhccChhhCcCHHHHhhChHhhccCchHhhh
Confidence            1111222244 7899999999999999999999999999877777666554

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou

>cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase)

Probab=100.00  E-value=6.1e-37  Score=272.49  Aligned_cols=260  Identities=13%  Similarity=0.152  Sum_probs=191.5

Q ss_pred             EEcCeeEEEEEEeeccCceEEEEEEecCC---CCceEEEEecCCCCCh-HHHHHHHHHhhhccccccccccceeeecc-c
Q 018699           44 EIGGKKYQIKGCAGQGGFAKVFKAYVNGD---PEDVVALKIQKPAFPW-EFYMYRQLDQRISGRERSSFGFAHRIHLY-S  118 (351)
Q Consensus        44 ~i~~~~Y~i~~~lg~G~~g~V~~a~~~~~---~~~~vaiK~~~~~~~~-e~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~  118 (351)
                      .+.+++|++.+.||+|+||.||+|.+...   .+..|++|.+...... ....+...........|+++......... +
T Consensus         2 ~~~~~~~~~~~~i~~g~~g~V~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~   81 (280)
T cd05043           2 AISRDRVTLSDLLQEGTFGRIFYGILIDEKPGKEEEVFVKTVKDHASEIQVTLLLQESCLLYGLSHQNILPILHVCIEDG   81 (280)
T ss_pred             ccchhheEEeeeecccCCceEEEEEEecCCCCceeEEEEEEccCCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCC
Confidence            46789999999999999999999996432   3688999987754322 12222222233445577888887776543 5


Q ss_pred             CeeEEEEEecCCCCHHHHHHHHHhh----CCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeec
Q 018699          119 DYSILVCDYLSQGTLQDAINSYVVI----GKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLD  194 (351)
Q Consensus       119 ~~~~lv~e~~~~~sL~~~l~~~~~~----~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~  194 (351)
                      ...+++++|+++++|.+++......    +..+++..++.++.|++.|+.|||+++++|+||+|+||+++          
T Consensus        82 ~~~~~~~~~~~~~~L~~~l~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~p~nil~~----------  151 (280)
T cd05043          82 EPPFVLYPYMNWGNLKLFLQQCRLGEANNPQALSTQQLVHMAIQIACGMSYLHKRGVIHKDIAARNCVID----------  151 (280)
T ss_pred             CCCEEEEEcCCCCcHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHHCCEeecccCHhhEEEc----------
Confidence            6789999999999999999775321    14689999999999999999999999999999999999998          


Q ss_pred             cCCCCCcccCCeEEeecCCccccccCCCCccccccccCCCcccceeccCCCCCccchHhHHHHHHHHHHh-Ccccccccc
Q 018699          195 HDRSGPWQDQGLCLVDWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQEKKPWKFQVDTYGLCAIVHMMLH-NSYMEIEKK  273 (351)
Q Consensus       195 ~~~~~~~~~~~~~l~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~-g~~p~~~~~  273 (351)
                             .++.++|+|||++................++..|+|||.+.+..++.++|||||||++|++++ |..||....
T Consensus       152 -------~~~~~kl~d~g~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~  224 (280)
T cd05043         152 -------EELQVKITDNALSRDLFPMDYHCLGDNENRPVKWMALESLVNKEYSSASDVWSFGVLLWELMTLGQTPYVEID  224 (280)
T ss_pred             -------CCCcEEECCCCCcccccCCceEEeCCCCCcchhccCHHHHhcCCCCchhhHHHhHHHHHHHhcCCCCCcCcCC
Confidence                   667899999999864321111111122335667999999988889999999999999999998 999987543


Q ss_pred             CCCCCceee-ecCcchhhhhHHHHHHHHHHHHhcCCCCCChHHHHHHHH
Q 018699          274 ASPDGGLVY-LPKLSFKRYWKVELWKSLFTNLLNMSSGNDKEVLQNLQK  321 (351)
Q Consensus       274 ~~~~~~~~~-~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~~  321 (351)
                      +........ ......+...+ +.+.+++.+||..||++||++.+++..
T Consensus       225 ~~~~~~~~~~~~~~~~~~~~~-~~~~~li~~~l~~~p~~Rps~~~~~~~  272 (280)
T cd05043         225 PFEMAAYLKDGYRLAQPINCP-DELFAVMACCWALDPEERPSFSQLVQC  272 (280)
T ss_pred             HHHHHHHHHcCCCCCCCCcCC-HHHHHHHHHHcCCChhhCCCHHHHHHH
Confidence            221100000 01111112223 778999999999999999999999853

Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It

>cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase

Probab=100.00  E-value=4.8e-37  Score=273.95  Aligned_cols=252  Identities=18%  Similarity=0.144  Sum_probs=191.5

Q ss_pred             eEEEEEEeeccCceEEEEEEecCCCCceEEEEecCCCCChHHHHHHHHHhhhccccccccccceeeecccCeeEEEEEec
Q 018699           49 KYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFPWEFYMYRQLDQRISGRERSSFGFAHRIHLYSDYSILVCDYL  128 (351)
Q Consensus        49 ~Y~i~~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~  128 (351)
                      .|.-.+.||.|++|.||+|. +..+++.+++|.+..........+...........++++.........++..++|+||+
T Consensus        20 ~~~~~~~lg~g~~g~v~~~~-~~~~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~~~h~~vv~~~~~~~~~~~~~~v~e~~   98 (285)
T cd06648          20 YLDNFVKIGEGSTGIVCIAT-DKSTGRQVAVKKMDLRKQQRRELLFNEVVIMRDYQHPNIVEMYSSYLVGDELWVVMEFL   98 (285)
T ss_pred             hhhcceEeccCCCeEEEEEE-ECCCCCEEEEEEEeccchhHHHHHHHHHHHHHHcCCCChheEEEEEEcCCeEEEEEecc
Confidence            46667899999999999999 46678999999876433222221111122334446778888888777788999999999


Q ss_pred             CCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeeccCCCCCcccCCeEE
Q 018699          129 SQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSGPWQDQGLCL  208 (351)
Q Consensus       129 ~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~~~~~~~~~~~~l  208 (351)
                      ++++|.+++..     ..+++..+..++.|++.|+++||++|++|+||+|+||+++                 .++.++|
T Consensus        99 ~~~~L~~~~~~-----~~~~~~~~~~~~~ql~~~l~~lH~~~i~H~dl~p~Nil~~-----------------~~~~~~l  156 (285)
T cd06648          99 EGGALTDIVTH-----TRMNEEQIATVCLAVLKALSFLHAQGVIHRDIKSDSILLT-----------------SDGRVKL  156 (285)
T ss_pred             CCCCHHHHHHh-----CCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCChhhEEEc-----------------CCCcEEE
Confidence            99999998876     4688899999999999999999999999999999999998                 6778999


Q ss_pred             eecCCccccccCCCCccccccccCCCcccceeccCCCCCccchHhHHHHHHHHHHhCccccccccCCCCCcee---eecC
Q 018699          209 VDWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQEKKPWKFQVDTYGLCAIVHMMLHNSYMEIEKKASPDGGLV---YLPK  285 (351)
Q Consensus       209 ~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~p~~~~~~~~~~~~~---~~~~  285 (351)
                      +|||.+......  ........|+..|+|||.+.+..++.++|+||+||++|+|++|..||............   ..+.
T Consensus       157 ~d~g~~~~~~~~--~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGv~l~ell~g~~p~~~~~~~~~~~~~~~~~~~~  234 (285)
T cd06648         157 SDFGFCAQVSKE--VPRRKSLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMVDGEPPYFNEPPLQAMKRIRDNLPPK  234 (285)
T ss_pred             cccccchhhccC--CcccccccCCccccCHHHhcCCCCCCcccHHHHHHHHHHHHhCCCCCcCCCHHHHHHHHHhcCCCC
Confidence            999987543211  11123346788999999998888899999999999999999999998654322100000   0011


Q ss_pred             cchhhhhHHHHHHHHHHHHhcCCCCCChHHHHHHHHHHHHH
Q 018699          286 LSFKRYWKVELWKSLFTNLLNMSSGNDKEVLQNLQKSFQDY  326 (351)
Q Consensus       286 ~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~~~~~~~  326 (351)
                      ...+...+ ..+.+||.+||+.+|++||++.++++|+|...
T Consensus       235 ~~~~~~~~-~~l~~li~~~l~~~p~~Rpt~~~il~~~~~~~  274 (285)
T cd06648         235 LKNLHKVS-PRLRSFLDRMLVRDPAQRATAAELLNHPFLAK  274 (285)
T ss_pred             CcccccCC-HHHHHHHHHHcccChhhCcCHHHHccCccccc
Confidence            11111122 68999999999999999999999999987554

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun

>cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10

Probab=100.00  E-value=5.6e-37  Score=276.70  Aligned_cols=253  Identities=19%  Similarity=0.236  Sum_probs=185.4

Q ss_pred             CeeEEEEEEeeccCceEEEEEEecCCCCceEEEEecCCCCChH---HHHHHHHHhhhccccccccccceeeeccc--Cee
Q 018699           47 GKKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFPWE---FYMYRQLDQRISGRERSSFGFAHRIHLYS--DYS  121 (351)
Q Consensus        47 ~~~Y~i~~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~~~e---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~  121 (351)
                      .++|++.+.||.|++|.||+|. +..+|+.||+|++......+   .....++ .......++++.....+....  +..
T Consensus         6 ~~~y~~~~~ig~g~~~~v~~~~-~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~-~~l~~l~h~~i~~~~~~~~~~~~~~~   83 (309)
T cd07845           6 VTEFEKLNRIGEGTYGIVYRAR-DTTSGEIVALKKVRMDNERDGIPISSLREI-TLLLNLRHPNIVELKEVVVGKHLDSI   83 (309)
T ss_pred             ccceeEeeeeeecCCEEEEEEE-ECCCCcEEEEEEEEeccCCCCCcchhhHHH-HHHHhCCCCCCcceEEEEecCCCCeE
Confidence            4689999999999999999999 56788999999976432211   1111221 222334566777666665433  568


Q ss_pred             EEEEEecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeeccCCCCCc
Q 018699          122 ILVCDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSGPW  201 (351)
Q Consensus       122 ~lv~e~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~~~~~~  201 (351)
                      ++||||+. ++|.+++...   ...+++..++.++.|++.|+.|||+.|++|+||+|+||+++                 
T Consensus        84 ~lv~e~~~-~~l~~~l~~~---~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nil~~-----------------  142 (309)
T cd07845          84 FLVMEYCE-QDLASLLDNM---PTPFSESQVKCLMLQLLRGLQYLHENFIIHRDLKVSNLLLT-----------------  142 (309)
T ss_pred             EEEEecCC-CCHHHHHHhc---ccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEC-----------------
Confidence            99999994 5898888764   35789999999999999999999999999999999999999                 


Q ss_pred             ccCCeEEeecCCccccccCCCCccccccccCCCcccceeccC-CCCCccchHhHHHHHHHHHHhCccccccccCCCC---
Q 018699          202 QDQGLCLVDWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQEK-KPWKFQVDTYGLCAIVHMMLHNSYMEIEKKASPD---  277 (351)
Q Consensus       202 ~~~~~~l~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~~DiwslG~il~~l~~g~~p~~~~~~~~~---  277 (351)
                      .++.++|+|||.+......  ........+++.|+|||.+.+ ..++.++|||||||++|+|++|.+||...+....   
T Consensus       143 ~~~~~kL~dfg~~~~~~~~--~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~~f~~~~~~~~~~~  220 (309)
T cd07845         143 DKGCLKIADFGLARTYGLP--AKPMTPKVVTLWYRAPELLLGCTTYTTAIDMWAVGCILAELLAHKPLLPGKSEIEQLDL  220 (309)
T ss_pred             CCCCEEECccceeeecCCc--cCCCCcccccccccChhhhcCCCCcCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHH
Confidence            6778999999988654321  112223345778999999865 5578999999999999999999999864332100   


Q ss_pred             ----------------------CceeeecC--cchhh--hhHHHHHHHHHHHHhcCCCCCChHHHHHHHHHHH
Q 018699          278 ----------------------GGLVYLPK--LSFKR--YWKVELWKSLFTNLLNMSSGNDKEVLQNLQKSFQ  324 (351)
Q Consensus       278 ----------------------~~~~~~~~--~~~~~--~~~~~~~~~li~~~L~~dP~~R~s~~e~l~~~~~  324 (351)
                                            ..+.....  .....  .+.++.+.+||.+||.+||++||++.++++|+|.
T Consensus       221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R~t~~~il~h~~f  293 (309)
T cd07845         221 IIQLLGTPNESIWPGFSDLPLVGKFTLPKQPYNNLKHKFPWLSEAGLRLLNFLLMYDPKKRATAEEALESSYF  293 (309)
T ss_pred             HHHhcCCCChhhchhhhcccccccccccCCCCCchHHhccccCHHHHHHHHHHhcCChhhCcCHHHHhcChhh
Confidence                                  00000000  00000  0112778999999999999999999999999864

Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing

>cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

Probab=100.00  E-value=2.9e-36  Score=268.65  Aligned_cols=254  Identities=13%  Similarity=0.111  Sum_probs=185.5

Q ss_pred             CeeEEEEEEeeccCceEEEEEEe---cCCCCceEEEEecCCCCChHHHHHHHHHhhhccccccccccceeeec--ccCee
Q 018699           47 GKKYQIKGCAGQGGFAKVFKAYV---NGDPEDVVALKIQKPAFPWEFYMYRQLDQRISGRERSSFGFAHRIHL--YSDYS  121 (351)
Q Consensus        47 ~~~Y~i~~~lg~G~~g~V~~a~~---~~~~~~~vaiK~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~  121 (351)
                      ..+|++.+.||+|+||+||.|..   +..+++.||+|.+..........+......+....|++++....+..  ....+
T Consensus         3 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~   82 (284)
T cd05081           3 ERHLKFIQQLGKGNFGSVELCRYDPLQDNTGEVVAVKKLQHSTAEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNL   82 (284)
T ss_pred             cccceeeeeccCCCCceEEEEEecCCcCCCCcEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCeeEEEEEEccCCCCce
Confidence            46899999999999999999974   34568899999987654333322222233344556778777766543  34568


Q ss_pred             EEEEEecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeeccCCCCCc
Q 018699          122 ILVCDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSGPW  201 (351)
Q Consensus       122 ~lv~e~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~~~~~~  201 (351)
                      ++|+||+++++|.+++...   ...+++..++.++.|++.||.|||++|++|+||+|+||+++                 
T Consensus        83 ~lv~e~~~~~~L~~~l~~~---~~~l~~~~~~~~~~~l~~aL~~LH~~~i~H~dlkp~nili~-----------------  142 (284)
T cd05081          83 RLVMEYLPYGSLRDYLQKH---RERLDHRKLLLYASQICKGMEYLGSKRYVHRDLATRNILVE-----------------  142 (284)
T ss_pred             EEEEEecCCCCHHHHHHhc---CcCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCHhhEEEC-----------------
Confidence            9999999999999999764   35689999999999999999999999999999999999998                 


Q ss_pred             ccCCeEEeecCCccccccCCCCccc-cccccCCCcccceeccCCCCCccchHhHHHHHHHHHHhCccccccccCCCC---
Q 018699          202 QDQGLCLVDWGRGIDLHLFPDNMEF-EGDCRTSGFRCIEMQEKKPWKFQVDTYGLCAIVHMMLHNSYMEIEKKASPD---  277 (351)
Q Consensus       202 ~~~~~~l~Dfg~a~~~~~~~~~~~~-~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~p~~~~~~~~~---  277 (351)
                      .++.++|+|||++............ ....++..|+|||.+.+..++.++|||||||++|+|++|..|+........   
T Consensus       143 ~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~~~~~~~~~~~~~  222 (284)
T cd05081         143 SENRVKIGDFGLTKVLPQDKEYYKVREPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYSDKSCSPPAEFMRMM  222 (284)
T ss_pred             CCCeEEECCCcccccccCCCcceeecCCCCCceEeeCHHHhccCCcChHHHHHHHHHHHHHHhhcCCcCCCcchhhhhhc
Confidence            6778999999998654321111001 111234459999999888889999999999999999998766432211100   


Q ss_pred             Ccee--------------eecCcchhhhhHHHHHHHHHHHHhcCCCCCChHHHHHHHH
Q 018699          278 GGLV--------------YLPKLSFKRYWKVELWKSLFTNLLNMSSGNDKEVLQNLQK  321 (351)
Q Consensus       278 ~~~~--------------~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~~  321 (351)
                      +...              .....+.+...+ ..+.+||.+||.++|++|||+.+++..
T Consensus       223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~li~~cl~~~p~~Rpt~~ei~~~  279 (284)
T cd05081         223 GNDKQGQMIVYHLIELLKNNGRLPAPPGCP-AEIYAIMKECWNNDPSQRPSFSELALQ  279 (284)
T ss_pred             ccccccccchHHHHHHHhcCCcCCCCCCCC-HHHHHHHHHHccCChhhCCCHHHHHHH
Confidence            0000              000111122233 689999999999999999999999874

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th

>cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=1.4e-36  Score=267.98  Aligned_cols=252  Identities=15%  Similarity=0.141  Sum_probs=191.8

Q ss_pred             eeEEEEEEeeccCceEEEEEEecCCCCceEEEEecCCCC-----ChHHHHHHHHHhhhccccccccccceeeecc--cCe
Q 018699           48 KKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAF-----PWEFYMYRQLDQRISGRERSSFGFAHRIHLY--SDY  120 (351)
Q Consensus        48 ~~Y~i~~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~-----~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~  120 (351)
                      .+|++.+.||+|++|.||+|. +..+++.||+|.+....     ..+...+...........++++.........  .+.
T Consensus         2 ~~~~~~~~lg~g~~g~v~~~~-~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~   80 (264)
T cd06653           2 VNWRLGKLLGRGAFGEVYLCY-DADTGRELAVKQVPFDPDSQETSKEVNALECEIQLLKNLRHDRIVQYYGCLRDPEEKK   80 (264)
T ss_pred             CceeeeeeEccCCCeEEEEEE-EcCCCCEEEEEEEecCcccchhhHHHHHHHHHHHHHHHcCCCCcceEEEEEEcCCCCE
Confidence            479999999999999999999 56788999999875321     1111222222233444566777766665543  456


Q ss_pred             eEEEEEecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeeccCCCCC
Q 018699          121 SILVCDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSGP  200 (351)
Q Consensus       121 ~~lv~e~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~~~~~  200 (351)
                      +++++||+++++|.+++..    ...+++..++.++.|++.|+.|||++|++|+||+|+||+++                
T Consensus        81 ~~~v~e~~~~~~L~~~~~~----~~~l~~~~~~~~~~~i~~al~~LH~~~i~H~dl~p~ni~i~----------------  140 (264)
T cd06653          81 LSIFVEYMPGGSIKDQLKA----YGALTENVTRRYTRQILQGVSYLHSNMIVHRDIKGANILRD----------------  140 (264)
T ss_pred             EEEEEEeCCCCcHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEc----------------
Confidence            8899999999999999876    35688999999999999999999999999999999999998                


Q ss_pred             cccCCeEEeecCCccccccCC-CCccccccccCCCcccceeccCCCCCccchHhHHHHHHHHHHhCccccccccCCCCCc
Q 018699          201 WQDQGLCLVDWGRGIDLHLFP-DNMEFEGDCRTSGFRCIEMQEKKPWKFQVDTYGLCAIVHMMLHNSYMEIEKKASPDGG  279 (351)
Q Consensus       201 ~~~~~~~l~Dfg~a~~~~~~~-~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~p~~~~~~~~~~~  279 (351)
                       .++.++|+|||.+....... .........++..|+|||.+.+..++.++|+|||||++|+|++|..||..........
T Consensus       141 -~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~  219 (264)
T cd06653         141 -SAGNVKLGDFGASKRIQTICMSGTGIKSVTGTPYWMSPEVISGEGYGRKADVWSVACTVVEMLTEKPPWAEYEAMAAIF  219 (264)
T ss_pred             -CCCCEEECccccccccccccccCccccccCCcccccCHhhhcCCCCCccccHHHHHHHHHHHHhCCCCCCccCHHHHHH
Confidence             66779999999886543211 1112234467889999999988888999999999999999999999997543221111


Q ss_pred             e--eeecCcchhhhhHHHHHHHHHHHHhcCCCCCChHHHHHHHHHH
Q 018699          280 L--VYLPKLSFKRYWKVELWKSLFTNLLNMSSGNDKEVLQNLQKSF  323 (351)
Q Consensus       280 ~--~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~~~~  323 (351)
                      .  .......+|...+ +.+.++|.+||+ +|.+||++.+++.|||
T Consensus       220 ~~~~~~~~~~~p~~~~-~~~~~~i~~~l~-~~~~r~~~~~~~~~~~  263 (264)
T cd06653         220 KIATQPTKPMLPDGVS-DACRDFLKQIFV-EEKRRPTAEFLLRHPF  263 (264)
T ss_pred             HHHcCCCCCCCCcccC-HHHHHHHHHHhc-CcccCccHHHHhcCCC
Confidence            0  1122334455555 789999999999 5799999999999986

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho

>cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases

Probab=100.00  E-value=1.1e-36  Score=277.87  Aligned_cols=253  Identities=19%  Similarity=0.228  Sum_probs=183.9

Q ss_pred             CeeEEEEEEeeccCceEEEEEEecCCCCceEEEEecCCCCChH--HHHHHHHHhhhccccccccccceeeecc-----cC
Q 018699           47 GKKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFPWE--FYMYRQLDQRISGRERSSFGFAHRIHLY-----SD  119 (351)
Q Consensus        47 ~~~Y~i~~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~~~e--~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~  119 (351)
                      +++|++.+.||+|++|+||+|. +..+|+.||+|.+.......  .....++ .......+++++....+...     ..
T Consensus         4 ~~~y~i~~~lg~G~~g~vy~~~-~~~~~~~vaiK~~~~~~~~~~~~~~~~E~-~~l~~l~h~niv~~~~~~~~~~~~~~~   81 (336)
T cd07849           4 GPRYQNLSYIGEGAYGMVCSAT-HKPTGVKVAIKKISPFEHQTFCQRTLREI-KILRRFKHENIIGILDIIRPPSFESFN   81 (336)
T ss_pred             ccceEEEEEEEecCCeEEEEEE-EcCCCCeEEEEEecccccchhHHHHHHHH-HHHHhCCCCCcCchhheeecccccccc
Confidence            5789999999999999999999 56778999999986432211  1122221 22333346666666654432     24


Q ss_pred             eeEEEEEecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeeccCCCC
Q 018699          120 YSILVCDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSG  199 (351)
Q Consensus       120 ~~~lv~e~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~~~~  199 (351)
                      ..|+|+||+ +++|...+..     ..+++..++.++.|++.||.+||+.||+|+||+|+||+++               
T Consensus        82 ~~~lv~e~~-~~~l~~~~~~-----~~l~~~~~~~i~~ql~~aL~~LH~~~ivH~dlkp~Nill~---------------  140 (336)
T cd07849          82 DVYIVQELM-ETDLYKLIKT-----QHLSNDHIQYFLYQILRGLKYIHSANVLHRDLKPSNLLLN---------------  140 (336)
T ss_pred             eEEEEehhc-ccCHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEEC---------------
Confidence            579999999 4588877754     5789999999999999999999999999999999999999               


Q ss_pred             CcccCCeEEeecCCccccccCCCCc-cccccccCCCcccceeccC-CCCCccchHhHHHHHHHHHHhCccccccccCCC-
Q 018699          200 PWQDQGLCLVDWGRGIDLHLFPDNM-EFEGDCRTSGFRCIEMQEK-KPWKFQVDTYGLCAIVHMMLHNSYMEIEKKASP-  276 (351)
Q Consensus       200 ~~~~~~~~l~Dfg~a~~~~~~~~~~-~~~~~~g~~~y~aPE~~~~-~~~~~~~DiwslG~il~~l~~g~~p~~~~~~~~-  276 (351)
                        .++.++|+|||++.......... ......+++.|+|||.+.+ ..++.++||||+||++|+|++|+.||....... 
T Consensus       141 --~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGvil~el~~G~~~f~~~~~~~~  218 (336)
T cd07849         141 --TNCDLKICDFGLARIADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKAIDIWSVGCILAEMLSNRPLFPGKDYLHQ  218 (336)
T ss_pred             --CCCCEEECcccceeeccccccccCCcCCcCcCCCccChHHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHH
Confidence              77889999999886533221111 1233467899999998754 567899999999999999999999985432100 


Q ss_pred             --------------C---------Cce----eeecCcchh---hhhHHHHHHHHHHHHhcCCCCCChHHHHHHHHHHHH
Q 018699          277 --------------D---------GGL----VYLPKLSFK---RYWKVELWKSLFTNLLNMSSGNDKEVLQNLQKSFQD  325 (351)
Q Consensus       277 --------------~---------~~~----~~~~~~~~~---~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~~~~~~  325 (351)
                                    .         ..+    ......+..   ...+ +.+.++|.+||+.||++||++.+++.|+|..
T Consensus       219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~li~~~l~~dP~~Rpt~~e~l~hp~~~  296 (336)
T cd07849         219 LNLILGVLGTPSQEDLNCIISLRARNYIKSLPFKPKVPWNKLFPNAD-PKALDLLDKMLTFNPHKRITVEEALAHPYLE  296 (336)
T ss_pred             HHHHHHHcCCCCHHHHHHhhchhhhhHHhhcCcCCcccHHHHhcccC-cHHHHHHHHHcCCChhhCcCHHHHhcCcccc
Confidence                          0         000    000000100   1112 6789999999999999999999999998744

Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase

>cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases

Probab=100.00  E-value=1.2e-36  Score=267.10  Aligned_cols=248  Identities=12%  Similarity=0.111  Sum_probs=188.8

Q ss_pred             EcCeeEEEEEEeeccCceEEEEEEecCCCCceEEEEecCCCCChHHHHHHHHHhhhccccccccccceeeecccCeeEEE
Q 018699           45 IGGKKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFPWEFYMYRQLDQRISGRERSSFGFAHRIHLYSDYSILV  124 (351)
Q Consensus        45 i~~~~Y~i~~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv  124 (351)
                      +..++|++.+.||.|++|.||+|..   .|+.||+|.+............+ ........++++.....+....+..++|
T Consensus         3 ~~~~~~~~~~~ig~g~~g~v~~~~~---~~~~v~iK~~~~~~~~~~~~~~e-~~~l~~l~~~~i~~~~~~~~~~~~~~~v   78 (256)
T cd05039           3 INSKELKLGATIGKGEFGDVMLGDY---RGQKVAVKCLKDDSTAAQAFLAE-ASVMTTLRHPNLVQLLGVVLQGNPLYIV   78 (256)
T ss_pred             cChhhccceeeeecCCCceEEEEEe---cCcEEEEEEeccchhHHHHHHHH-HHHHHhcCCcceeeeEEEEcCCCCeEEE
Confidence            4578999999999999999999984   36889999987664322222222 2233444577777777777778889999


Q ss_pred             EEecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeeccCCCCCcccC
Q 018699          125 CDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSGPWQDQ  204 (351)
Q Consensus       125 ~e~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~~~~~~~~~  204 (351)
                      |||+++++|.+++....  ...+++..+..++.|++.|+.|||++|++|+||+|+||+++                 .++
T Consensus        79 ~e~~~~~~L~~~~~~~~--~~~~~~~~~~~~~~qi~~~l~~lh~~~i~H~di~p~Nili~-----------------~~~  139 (256)
T cd05039          79 TEYMAKGSLVDYLRSRG--RAVITLAQQLGFALDVCEGMEYLEEKNFVHRDLAARNVLVS-----------------EDL  139 (256)
T ss_pred             EEecCCCcHHHHHHhcC--CCCCCHHHHHHHHHHHHHHHHHHHhCCccchhcccceEEEe-----------------CCC
Confidence            99999999999997642  23689999999999999999999999999999999999999                 778


Q ss_pred             CeEEeecCCccccccCCCCccccccccCCCcccceeccCCCCCccchHhHHHHHHHHHHh-CccccccccCCCCCce-ee
Q 018699          205 GLCLVDWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQEKKPWKFQVDTYGLCAIVHMMLH-NSYMEIEKKASPDGGL-VY  282 (351)
Q Consensus       205 ~~~l~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~-g~~p~~~~~~~~~~~~-~~  282 (351)
                      .++|+|||.+....     ........+..|+|||.+.+..++.++|+||||+++|++++ |..||........... ..
T Consensus       140 ~~~l~d~g~~~~~~-----~~~~~~~~~~~~~ape~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~  214 (256)
T cd05039         140 VAKVSDFGLAKEAS-----QGQDSGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPHVEK  214 (256)
T ss_pred             CEEEcccccccccc-----cccccCCCcccccCchhhcCCcCCcHHHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHhc
Confidence            89999999886432     11112234567999999988888899999999999999997 9888864432100000 00


Q ss_pred             ecCcchhhhhHHHHHHHHHHHHhcCCCCCChHHHHHHHH
Q 018699          283 LPKLSFKRYWKVELWKSLFTNLLNMSSGNDKEVLQNLQK  321 (351)
Q Consensus       283 ~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~~  321 (351)
                      ......+...+ +.+.++|.+||+.+|++||++.+++..
T Consensus       215 ~~~~~~~~~~~-~~~~~li~~~l~~~p~~Rp~~~~l~~~  252 (256)
T cd05039         215 GYRMEAPEGCP-PEVYKVMKDCWELDPAKRPTFKQLREQ  252 (256)
T ss_pred             CCCCCCccCCC-HHHHHHHHHHhccChhhCcCHHHHHHH
Confidence            00112222233 788999999999999999999998864

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk

>KOG0607 consensus MAP kinase-interacting kinase and related serine/threonine protein kinases [Signal transduction mechanisms]

Probab=100.00  E-value=3.3e-37  Score=261.06  Aligned_cols=256  Identities=20%  Similarity=0.241  Sum_probs=205.9

Q ss_pred             EEE-EEEeeccCceEEEEEEecCCCCceEEEEecCCCCCh-HHHHHHHHHhhhccccccccccceeeecccCeeEEEEEe
Q 018699           50 YQI-KGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFPW-EFYMYRQLDQRISGRERSSFGFAHRIHLYSDYSILVCDY  127 (351)
Q Consensus        50 Y~i-~~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~~~-e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~  127 (351)
                      |++ .+.||.|+|+.|--|. ...+|..+|||++.+.... ...+++++........|.++..+..++..+..+|+|||.
T Consensus        79 YkLt~e~LGeGAyasVqtcv-~i~t~~EYAVKiidKq~gHsR~RvfREVe~f~~Cqgh~nilqLiefFEdd~~FYLVfEK  157 (463)
T KOG0607|consen   79 YKLTSELLGEGAYASVQTCV-SIQTGKEYAVKIIDKQPGHSRSRVFREVETFYQCQGHKNILQLIEFFEDDTRFYLVFEK  157 (463)
T ss_pred             HHhHHHHhcCccceeeeeee-eeccchhhhhhhhhcCCchHHHHHHHHHHHHHHhcCCccHHHHHHHhcccceEEEEEec
Confidence            444 4679999999999999 6889999999999876443 456777777766777888999999999999999999999


Q ss_pred             cCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeeccCCCCCcccCCeE
Q 018699          128 LSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSGPWQDQGLC  207 (351)
Q Consensus       128 ~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~~~~~~~~~~~~  207 (351)
                      +.||+|...|+++    +.|++.++..+.++|+.||.+||.+||+|||+||+||+....+              .-..+|
T Consensus       158 m~GGplLshI~~~----~~F~E~EAs~vvkdia~aLdFlH~kgIAHRDlKPENiLC~~pn--------------~vsPvK  219 (463)
T KOG0607|consen  158 MRGGPLLSHIQKR----KHFNEREASRVVKDIASALDFLHTKGIAHRDLKPENILCESPN--------------KVSPVK  219 (463)
T ss_pred             ccCchHHHHHHHh----hhccHHHHHHHHHHHHHHHHHHhhcCcccccCCccceeecCCC--------------CcCcee
Confidence            9999999999984    7899999999999999999999999999999999999998655              345589


Q ss_pred             EeecCCccccccCCC-----CccccccccCCCcccceec-----cCCCCCccchHhHHHHHHHHHHhCccccccccCCCC
Q 018699          208 LVDWGRGIDLHLFPD-----NMEFEGDCRTSGFRCIEMQ-----EKKPWKFQVDTYGLCAIVHMMLHNSYMEIEKKASPD  277 (351)
Q Consensus       208 l~Dfg~a~~~~~~~~-----~~~~~~~~g~~~y~aPE~~-----~~~~~~~~~DiwslG~il~~l~~g~~p~~~~~~~~~  277 (351)
                      ||||.++..+....+     .....+.+|+..|||||+.     ....|+.++|.||||+|+|-|+.|.+||...=.. .
T Consensus       220 iCDfDLgSg~k~~~~~spastP~L~tPvGSAEfMAPEVVd~fv~qA~~YDKrCDlwSLGvIlYImLsGYpPFvG~Cg~-d  298 (463)
T KOG0607|consen  220 ICDFDLGSGIKLNNDCSPASTPELLTPVGSAEFMAPEVVDVFVDQATFYDKRCDLWSLGVILYIMLSGYPPFVGHCGA-D  298 (463)
T ss_pred             eeccccccccccCCCCCCCCCccccCcccchhhcchhHHhhhccccccccccccHHHHHHHHHHHHhCCCCccCccCC-c
Confidence            999998764433222     1234566788899999986     2245789999999999999999999999765432 1


Q ss_pred             Cce----------------eeecCcchhhh-hH--HHHHHHHHHHHhcCCCCCChHHHHHHHHHHHH
Q 018699          278 GGL----------------VYLPKLSFKRY-WK--VELWKSLFTNLLNMSSGNDKEVLQNLQKSFQD  325 (351)
Q Consensus       278 ~~~----------------~~~~~~~~~~~-~~--~~~~~~li~~~L~~dP~~R~s~~e~l~~~~~~  325 (351)
                      ..+                +.....++|+. |.  +.+.+++|+.+|..|+..|.++.+.+.|||..
T Consensus       299 CGWdrGe~Cr~CQ~~LFesIQEGkYeFPdkdWahIS~eakdlisnLlvrda~~rlsa~~vlnhPw~~  365 (463)
T KOG0607|consen  299 CGWDRGEVCRVCQNKLFESIQEGKYEFPDKDWAHISSEAKDLISNLLVRDAKQRLSAAQVLNHPWVQ  365 (463)
T ss_pred             CCccCCCccHHHHHHHHHHHhccCCcCChhhhHHhhHHHHHHHHHHHhccHHhhhhhhhccCCcccc
Confidence            111                11223333322 32  27889999999999999999999999999854

>cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases

Probab=100.00  E-value=1.1e-36  Score=269.64  Aligned_cols=254  Identities=11%  Similarity=0.093  Sum_probs=184.1

Q ss_pred             EEEEEEeeccCceEEEEEEecCC--CCceEEEEecCCCCChH--HHHHHHHHhhhccccccccccceeeecccC------
Q 018699           50 YQIKGCAGQGGFAKVFKAYVNGD--PEDVVALKIQKPAFPWE--FYMYRQLDQRISGRERSSFGFAHRIHLYSD------  119 (351)
Q Consensus        50 Y~i~~~lg~G~~g~V~~a~~~~~--~~~~vaiK~~~~~~~~e--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------  119 (351)
                      |.+.+.||+|+||.||.|.+...  .+..||+|.+..+....  ..........+....|+++.....+.....      
T Consensus         1 ~~~~~~lg~G~~g~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~   80 (273)
T cd05035           1 LKLGKILGEGEFGSVMEGQLSQDDGSQLKVAVKTMKLDIHTYSEIEEFLSEAACMKDFDHPNVMKLIGVCFEASSLQKIP   80 (273)
T ss_pred             CccccccCcCCCceEEEEEEecCCCCcceEEEEEeccCcCCHHHHHHHHHHHHHHHhCCCCCeeeEEeeeccCCccccCc
Confidence            57889999999999999986332  35789999987543322  122222223344456777777666554333      


Q ss_pred             eeEEEEEecCCCCHHHHHHHHHh--hCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeeccCC
Q 018699          120 YSILVCDYLSQGTLQDAINSYVV--IGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDR  197 (351)
Q Consensus       120 ~~~lv~e~~~~~sL~~~l~~~~~--~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~~  197 (351)
                      ..++++||+++++|..++.....  ....+++..+..++.|++.||.|||+++++|+||+|+||+++             
T Consensus        81 ~~~~v~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~aL~~lH~~~i~H~dlkp~Nil~~-------------  147 (273)
T cd05035          81 KPMVILPFMKHGDLHSFLLYSRLGGLPEKLPLQTLLKFMVDIALGMEYLSNRNFIHRDLAARNCMLR-------------  147 (273)
T ss_pred             ccEEEEeccCCCCHHHHHHHhhccCCcccCCHHHHHHHHHHHHHHHHHHHhCCeeccccchheEEEC-------------
Confidence            37999999999999998865421  123689999999999999999999999999999999999998             


Q ss_pred             CCCcccCCeEEeecCCccccccCCCCccccccccCCCcccceeccCCCCCccchHhHHHHHHHHHHh-CccccccccCCC
Q 018699          198 SGPWQDQGLCLVDWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQEKKPWKFQVDTYGLCAIVHMMLH-NSYMEIEKKASP  276 (351)
Q Consensus       198 ~~~~~~~~~~l~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~-g~~p~~~~~~~~  276 (351)
                          .++.++|+|||++................++..|+|||.+.+..++.++|||||||++|+|++ |..||.......
T Consensus       148 ----~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~SlG~il~el~~~g~~p~~~~~~~~  223 (273)
T cd05035         148 ----EDMTVCVADFGLSKKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGQTPYPGVENHE  223 (273)
T ss_pred             ----CCCeEEECCccceeeccccccccccccccCCccccCHhhcccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHH
Confidence                677899999999865322111111112234567999999988888999999999999999999 888875433221


Q ss_pred             CCce-eeecCcchhhhhHHHHHHHHHHHHhcCCCCCChHHHHHHHH
Q 018699          277 DGGL-VYLPKLSFKRYWKVELWKSLFTNLLNMSSGNDKEVLQNLQK  321 (351)
Q Consensus       277 ~~~~-~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~~  321 (351)
                      .... ........+..++ ..+.++|.+||+.||++||++.+++.+
T Consensus       224 ~~~~~~~~~~~~~~~~~~-~~~~~li~~~l~~~p~~Rp~~~e~~~~  268 (273)
T cd05035         224 IYDYLRHGNRLKQPEDCL-DELYDLMYSCWRADPKDRPTFTKLREV  268 (273)
T ss_pred             HHHHHHcCCCCCCCcCCC-HHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence            0000 0011222333444 789999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu

>cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1

Probab=100.00  E-value=2.2e-36  Score=269.58  Aligned_cols=255  Identities=12%  Similarity=0.087  Sum_probs=186.7

Q ss_pred             CeeEEEEEEeeccCceEEEEEEec---CCCCceEEEEecCCCCChH-HHHHHHHHhhhccccccccccceeeecc--cCe
Q 018699           47 GKKYQIKGCAGQGGFAKVFKAYVN---GDPEDVVALKIQKPAFPWE-FYMYRQLDQRISGRERSSFGFAHRIHLY--SDY  120 (351)
Q Consensus        47 ~~~Y~i~~~lg~G~~g~V~~a~~~---~~~~~~vaiK~~~~~~~~e-~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~  120 (351)
                      ++.|++.+.||+|+||.||+|.++   ..+++.||+|.+....... ...+......+....++++.........  +..
T Consensus         3 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~   82 (284)
T cd05079           3 KRFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNG   82 (284)
T ss_pred             hhhhhhceecCCCCceeEEEEEEccCCCCccceEEEEEcCccccHHHHHHHHHHHHHHHhCCCCCeeeeeeEEecCCCCc
Confidence            456899999999999999999852   3568899999987553222 1222222233445567777776665544  356


Q ss_pred             eEEEEEecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeeccCCCCC
Q 018699          121 SILVCDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSGP  200 (351)
Q Consensus       121 ~~lv~e~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~~~~~  200 (351)
                      .++||||+++++|.+++...   ...+++..+..++.|++.|++|||++|++|+||+|+||+++                
T Consensus        83 ~~lv~e~~~g~~L~~~l~~~---~~~~~~~~~~~i~~~i~~aL~~lH~~gi~H~dlkp~Nil~~----------------  143 (284)
T cd05079          83 IKLIMEFLPSGSLKEYLPRN---KNKINLKQQLKYAVQICKGMDYLGSRQYVHRDLAARNVLVE----------------  143 (284)
T ss_pred             eEEEEEccCCCCHHHHHHhc---cCCCCHHHHHHHHHHHHHHHHHHHHCCeeecccchheEEEc----------------
Confidence            89999999999999998763   34689999999999999999999999999999999999998                


Q ss_pred             cccCCeEEeecCCccccccCCCC-ccccccccCCCcccceeccCCCCCccchHhHHHHHHHHHHhCccccccccCCC---
Q 018699          201 WQDQGLCLVDWGRGIDLHLFPDN-MEFEGDCRTSGFRCIEMQEKKPWKFQVDTYGLCAIVHMMLHNSYMEIEKKASP---  276 (351)
Q Consensus       201 ~~~~~~~l~Dfg~a~~~~~~~~~-~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~p~~~~~~~~---  276 (351)
                       .++.++|+|||.+......... .......++..|+|||.+.+..++.++|||||||++|+|+++..|........   
T Consensus       144 -~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~ellt~~~~~~~~~~~~~~~  222 (284)
T cd05079         144 -SEHQVKIGDFGLTKAIETDKEYYTVKDDLDSPVFWYAPECLIQSKFYIASDVWSFGVTLYELLTYCDSESSPMTLFLKM  222 (284)
T ss_pred             -CCCCEEECCCccccccccCccceeecCCCCCCccccCHHHhccCCCCccccchhhhhhhhhhhcCCCCCccccchhhhh
Confidence             6778999999988654321111 11123446677999999988888999999999999999999876543221100   


Q ss_pred             ----CCcee---------eecCcchhhhhHHHHHHHHHHHHhcCCCCCChHHHHHHHHH
Q 018699          277 ----DGGLV---------YLPKLSFKRYWKVELWKSLFTNLLNMSSGNDKEVLQNLQKS  322 (351)
Q Consensus       277 ----~~~~~---------~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~~~  322 (351)
                          .+...         .....+.+...+ ..+.+||.+||+.||++||++.+++.+.
T Consensus       223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~li~~~l~~~p~~Rpt~~~il~~l  280 (284)
T cd05079         223 IGPTHGQMTVTRLVRVLEEGKRLPRPPNCP-EEVYQLMRKCWEFQPSKRTTFQNLIEGF  280 (284)
T ss_pred             cccccccccHHHHHHHHHcCccCCCCCCCC-HHHHHHHHHHccCCcccCcCHHHHHHHH
Confidence                00000         000111122233 7899999999999999999999998763

Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a

>cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=1.4e-36  Score=265.88  Aligned_cols=250  Identities=20%  Similarity=0.178  Sum_probs=195.0

Q ss_pred             eEEEEEEeeccCceEEEEEEecCCCCceEEEEecCCCCCh--HHHHHHHHHhhhccccccccccceeeecccCeeEEEEE
Q 018699           49 KYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFPW--EFYMYRQLDQRISGRERSSFGFAHRIHLYSDYSILVCD  126 (351)
Q Consensus        49 ~Y~i~~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~~~--e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e  126 (351)
                      +|++.+.||+|++|.||+|. +..+++.|++|.+......  ....+...........++++.........++..+++||
T Consensus         1 ~y~~~~~l~~g~~~~v~~~~-~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e   79 (254)
T cd06627           1 NYQLGDLIGRGAFGVVYKGL-NLETGDFVAIKQISLEKIKEEALKSIMQEIDLLKNLKHPNIVKYIGSIETSDSLYIILE   79 (254)
T ss_pred             CceeeeEEcccCCeEEEEEE-EcCCCcEEEEEEecccccCHHHHHHHHHHHHHHHhCCCCCccEEEEEEEeCCEEEEEEe
Confidence            58999999999999999999 5677889999998876542  22222222233344456777777777777889999999


Q ss_pred             ecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeeccCCCCCcccCCe
Q 018699          127 YLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSGPWQDQGL  206 (351)
Q Consensus       127 ~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~~~~~~~~~~~  206 (351)
                      |+++++|.+++..    ...+++..++.++.|++.|+.+||+.|++|+||+|+||+++                 .++.+
T Consensus        80 ~~~~~~L~~~~~~----~~~l~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~ni~i~-----------------~~~~~  138 (254)
T cd06627          80 YAENGSLRQIIKK----FGPFPESLVAVYVYQVLQGLAYLHEQGVIHRDIKAANILTT-----------------KDGVV  138 (254)
T ss_pred             cCCCCcHHHHHHh----ccCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCHHHEEEC-----------------CCCCE
Confidence            9999999999887    36789999999999999999999999999999999999999                 67789


Q ss_pred             EEeecCCccccccCCCCccccccccCCCcccceeccCCCCCccchHhHHHHHHHHHHhCccccccccCCCCC-ceeeecC
Q 018699          207 CLVDWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQEKKPWKFQVDTYGLCAIVHMMLHNSYMEIEKKASPDG-GLVYLPK  285 (351)
Q Consensus       207 ~l~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~p~~~~~~~~~~-~~~~~~~  285 (351)
                      +|+|||.+......  ........++..|+|||...+..++.++|+||+|+++|+|++|..||......... .......
T Consensus       139 ~l~d~~~~~~~~~~--~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~~lG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~  216 (254)
T cd06627         139 KLADFGVATKLNDV--SKDDASVVGTPYWMAPEVIEMSGASTASDIWSLGCTVIELLTGNPPYYDLNPMAALFRIVQDDH  216 (254)
T ss_pred             EEeccccceecCCC--cccccccccchhhcCHhhhcCCCCCcchhHHHHHHHHHHHHhCCCCCCCccHHHHHHHHhccCC
Confidence            99999988654321  12223446788999999998877889999999999999999999998643321000 0001112


Q ss_pred             cchhhhhHHHHHHHHHHHHhcCCCCCChHHHHHHHHHH
Q 018699          286 LSFKRYWKVELWKSLFTNLLNMSSGNDKEVLQNLQKSF  323 (351)
Q Consensus       286 ~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~~~~  323 (351)
                      ...+...+ +.+.++|.+||..+|++||++.+++.|+|
T Consensus       217 ~~~~~~~~-~~~~~~i~~~l~~~p~~R~~~~~~l~~~~  253 (254)
T cd06627         217 PPLPEGIS-PELKDFLMQCFQKDPNLRPTAKQLLKHPW  253 (254)
T ss_pred             CCCCCCCC-HHHHHHHHHHHhCChhhCcCHHHHhcCCC
Confidence            22233333 78999999999999999999999999875

Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast

>cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases

Probab=100.00  E-value=7.5e-37  Score=274.06  Aligned_cols=258  Identities=12%  Similarity=0.071  Sum_probs=185.9

Q ss_pred             cCeeEEEEEEeeccCceEEEEEEecC-------------CCCceEEEEecCCCCChH-HHHHHHHHhhhccccccccccc
Q 018699           46 GGKKYQIKGCAGQGGFAKVFKAYVNG-------------DPEDVVALKIQKPAFPWE-FYMYRQLDQRISGRERSSFGFA  111 (351)
Q Consensus        46 ~~~~Y~i~~~lg~G~~g~V~~a~~~~-------------~~~~~vaiK~~~~~~~~e-~~~~~~~~~~~~~~~~~~~~~~  111 (351)
                      ..++|++.+.||+|+||.||+|++..             .....||+|.+....... ...+......+....++++...
T Consensus         3 ~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~   82 (295)
T cd05097           3 PRQQLRLKEKLGEGQFGEVHLCEAEGLAEFLGEGAPEFDGQPVLVAVKMLRADVTKTARNDFLKEIKIMSRLKNPNIIRL   82 (295)
T ss_pred             chHhCeehhccCCCCCceEEecccccchhhccccCcccCCCceEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCcCeE
Confidence            45789999999999999999998421             112358999987653322 1222222234455667888888


Q ss_pred             eeeecccCeeEEEEEecCCCCHHHHHHHHHhh--------CCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEE
Q 018699          112 HRIHLYSDYSILVCDYLSQGTLQDAINSYVVI--------GKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLI  183 (351)
Q Consensus       112 ~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~~--------~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill  183 (351)
                      .......+..++||||+++++|.+++......        ...+++..+..++.|++.|++|||++|++|+||+|+||++
T Consensus        83 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~i~H~dlkp~Nill  162 (295)
T cd05097          83 LGVCVSDDPLCMITEYMENGDLNQFLSQREIESTFTHANNIPSVSIANLLYMAVQIASGMKYLASLNFVHRDLATRNCLV  162 (295)
T ss_pred             EEEEcCCCccEEEEecCCCCcHHHHHHhccccccccccccCCcccHHHHHHHHHHHHHHHHHHHhcCeeccccChhhEEE
Confidence            88888888999999999999999998653110        1246788899999999999999999999999999999999


Q ss_pred             eecCCcceeeccCCCCCcccCCeEEeecCCccccccCCCCccccccccCCCcccceeccCCCCCccchHhHHHHHHHHHH
Q 018699          184 RYARDELTVLDHDRSGPWQDQGLCLVDWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQEKKPWKFQVDTYGLCAIVHMML  263 (351)
Q Consensus       184 ~~~~~~~~~~~~~~~~~~~~~~~~l~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~l~  263 (351)
                      +                 .++.++|+|||++................++..|+|||.+.+..++.++|||||||++|+|+
T Consensus       163 ~-----------------~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~~l~el~  225 (295)
T cd05097         163 G-----------------NHYTIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMAWESILLGKFTTASDVWAFGVTLWEMF  225 (295)
T ss_pred             c-----------------CCCcEEecccccccccccCcceeccCcCcCceeecChhhhccCCcCchhhHHHHHHHHHHHH
Confidence            8                 66779999999886432111111112223466899999998888999999999999999999


Q ss_pred             h--CccccccccCCCC----Cc----eeeecCcchhhhhHHHHHHHHHHHHhcCCCCCChHHHHHHHH
Q 018699          264 H--NSYMEIEKKASPD----GG----LVYLPKLSFKRYWKVELWKSLFTNLLNMSSGNDKEVLQNLQK  321 (351)
Q Consensus       264 ~--g~~p~~~~~~~~~----~~----~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~~  321 (351)
                      +  |..||........    ..    .........+...+ +.+.+||.+||..||++||++.++++.
T Consensus       226 ~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~l~~li~~~l~~~p~~RPs~~~i~~~  292 (295)
T cd05097         226 TLCKEQPYSLLSDEQVIENTGEFFRNQGRQIYLSQTPLCP-SPVFKLMMRCWSRDIKDRPTFNKIHHF  292 (295)
T ss_pred             HcCCCCCCcccChHHHHHHHHHhhhhccccccCCCCCCCC-HHHHHHHHHHcCCCchhCcCHHHHHHH
Confidence            8  5667754321100    00    00000011111223 789999999999999999999998653

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including

>cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

Probab=100.00  E-value=2.8e-36  Score=268.72  Aligned_cols=248  Identities=13%  Similarity=0.118  Sum_probs=182.3

Q ss_pred             eEEEEEEeeccCceEEEEEEe---cCCCCceEEEEecCCCCCh--HHHHHHHHHhhhccccccccccceeeecc--cCee
Q 018699           49 KYQIKGCAGQGGFAKVFKAYV---NGDPEDVVALKIQKPAFPW--EFYMYRQLDQRISGRERSSFGFAHRIHLY--SDYS  121 (351)
Q Consensus        49 ~Y~i~~~lg~G~~g~V~~a~~---~~~~~~~vaiK~~~~~~~~--e~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~  121 (351)
                      .|++.+.||+|+||+||++..   ...+++.||+|.+......  ......++ .......|+++.........  ....
T Consensus         5 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~-~~l~~l~h~~i~~~~~~~~~~~~~~~   83 (283)
T cd05080           5 YLKKIRVLGEGHFGKVSLYCYDPANDGTGEMVAVKTLKRECGQQNTSGWKKEI-NILKTLYHENIVKYKGCCSEQGGKGL   83 (283)
T ss_pred             hceeceecccCCCcEEEEeeEccccCCCCceEEEEEeccccChHHHHHHHHHH-HHHHhCCCCCEeeEEEEEecCCCceE
Confidence            349999999999999988753   3356789999998765331  22222222 23444567777776665433  4568


Q ss_pred             EEEEEecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeeccCCCCCc
Q 018699          122 ILVCDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSGPW  201 (351)
Q Consensus       122 ~lv~e~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~~~~~~  201 (351)
                      ++||||+++++|.+++..     ..+++..++.++.|++.|+.|||++||+|+||||+||+++                 
T Consensus        84 ~lv~e~~~~~~l~~~~~~-----~~l~~~~~~~i~~~l~~~l~~lH~~~i~H~dlkp~Nili~-----------------  141 (283)
T cd05080          84 QLIMEYVPLGSLRDYLPK-----HKLNLAQLLLFAQQICEGMAYLHSQHYIHRDLAARNVLLD-----------------  141 (283)
T ss_pred             EEEecCCCCCCHHHHHHH-----cCCCHHHHHHHHHHHHHHHHHHHHCCeeccccChheEEEc-----------------
Confidence            999999999999999875     4589999999999999999999999999999999999998                 


Q ss_pred             ccCCeEEeecCCccccccCCCCcc-ccccccCCCcccceeccCCCCCccchHhHHHHHHHHHHhCccccccccCCCC---
Q 018699          202 QDQGLCLVDWGRGIDLHLFPDNME-FEGDCRTSGFRCIEMQEKKPWKFQVDTYGLCAIVHMMLHNSYMEIEKKASPD---  277 (351)
Q Consensus       202 ~~~~~~l~Dfg~a~~~~~~~~~~~-~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~p~~~~~~~~~---  277 (351)
                      .++.++|+|||++........... .....++..|+|||.+.+..++.++||||||+++|+|++|..|+........   
T Consensus       142 ~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~~l~el~tg~~p~~~~~~~~~~~~  221 (283)
T cd05080         142 NDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAVECLKENKFSYASDVWSFGVTLYELLTHCDSKQSPPKKFEEMI  221 (283)
T ss_pred             CCCcEEEeecccccccCCcchhhccCCCCCCCceeeCHhHhcccCCCcccccHHHHHHHHHHHhCCCCCCCCcchhhhhh
Confidence            677899999998865432111111 1122345679999999888889999999999999999999988754322100   


Q ss_pred             ----Ccee---------eecCcchhhhhHHHHHHHHHHHHhcCCCCCChHHHHHHH
Q 018699          278 ----GGLV---------YLPKLSFKRYWKVELWKSLFTNLLNMSSGNDKEVLQNLQ  320 (351)
Q Consensus       278 ----~~~~---------~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~  320 (351)
                          +...         .....+.+...+ ..+.+++.+||++||++||++.+++.
T Consensus       222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~li~~cl~~~p~~Rps~~~i~~  276 (283)
T cd05080         222 GPKQGQMTVVRLIELLERGMRLPCPKNCP-QEVYILMKNCWETEAKFRPTFRSLIP  276 (283)
T ss_pred             cccccccchhhhhhhhhcCCCCCCCCCCC-HHHHHHHHHHhccChhhCCCHHHHHH
Confidence                0000         001111222333 78999999999999999999999986

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign

>cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase

Probab=100.00  E-value=1.8e-36  Score=266.61  Aligned_cols=252  Identities=13%  Similarity=0.106  Sum_probs=186.6

Q ss_pred             EEcCeeEEEEEEeeccCceEEEEEEecCCCCceEEEEecCCCCChHHHHHHHHHhhhccccccccccceeeecccCeeEE
Q 018699           44 EIGGKKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFPWEFYMYRQLDQRISGRERSSFGFAHRIHLYSDYSIL  123 (351)
Q Consensus        44 ~i~~~~Y~i~~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  123 (351)
                      ++..++|++.+.||+|+||.||+|.+  ..+..+|+|.+...........++ ........++++...+..... ...++
T Consensus         2 ~~~~~~~~~~~~lg~g~~~~vy~~~~--~~~~~~~iK~~~~~~~~~~~~~~e-~~~l~~l~~~~i~~~~~~~~~-~~~~~   77 (260)
T cd05073           2 EIPRESLKLEKKLGAGQFGEVWMATY--NKHTKVAVKTMKPGSMSVEAFLAE-ANVMKTLQHDKLVKLHAVVTK-EPIYI   77 (260)
T ss_pred             cccccceeEEeEecCccceEEEEEEe--cCCccEEEEecCCChhHHHHHHHH-HHHHHhcCCCCcceEEEEEcC-CCeEE
Confidence            46678999999999999999999984  334669999887653322222222 223344566777777776665 67899


Q ss_pred             EEEecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeeccCCCCCccc
Q 018699          124 VCDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSGPWQD  203 (351)
Q Consensus       124 v~e~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~~~~~~~~  203 (351)
                      +|||+++++|.+++....  +..++...+..++.|++.|+.+||+.|++|+||+|+||+++                 .+
T Consensus        78 v~e~~~~~~L~~~~~~~~--~~~~~~~~~~~~~~~l~~aL~~lH~~~i~H~dl~p~ni~i~-----------------~~  138 (260)
T cd05073          78 ITEFMAKGSLLDFLKSDE--GSKQPLPKLIDFSAQIAEGMAFIEQRNYIHRDLRAANILVS-----------------AS  138 (260)
T ss_pred             EEEeCCCCcHHHHHHhCC--ccccCHHHHHHHHHHHHHHHHHHHhCCccccccCcceEEEc-----------------CC
Confidence            999999999999997642  35678888999999999999999999999999999999998                 77


Q ss_pred             CCeEEeecCCccccccCCCCccccccccCCCcccceeccCCCCCccchHhHHHHHHHHHHh-CccccccccCCCCCc-ee
Q 018699          204 QGLCLVDWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQEKKPWKFQVDTYGLCAIVHMMLH-NSYMEIEKKASPDGG-LV  281 (351)
Q Consensus       204 ~~~~l~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~-g~~p~~~~~~~~~~~-~~  281 (351)
                      +.++|+|||.+...... .........++..|+|||.+.+..++.++|+|||||++|++++ |..||.......... ..
T Consensus       139 ~~~~l~d~~~~~~~~~~-~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~~~~~~~~~  217 (260)
T cd05073         139 LVCKIADFGLARVIEDN-EYTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRALE  217 (260)
T ss_pred             CcEEECCCcceeeccCC-CcccccCCcccccccCHhHhccCCcCccccchHHHHHHHHHHhcCCCCCCCCCHHHHHHHHh
Confidence            88999999988643211 1111222334567999999988888999999999999999998 898886533210000 00


Q ss_pred             eecCcchhhhhHHHHHHHHHHHHhcCCCCCChHHHHHHH
Q 018699          282 YLPKLSFKRYWKVELWKSLFTNLLNMSSGNDKEVLQNLQ  320 (351)
Q Consensus       282 ~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~  320 (351)
                      .....+.+...+ ..+.+++.+||+++|++||++.+++.
T Consensus       218 ~~~~~~~~~~~~-~~~~~~i~~~l~~~p~~Rp~~~~l~~  255 (260)
T cd05073         218 RGYRMPRPENCP-EELYNIMMRCWKNRPEERPTFEYIQS  255 (260)
T ss_pred             CCCCCCCcccCC-HHHHHHHHHHcccCcccCcCHHHHHH
Confidence            001111122233 67899999999999999999888764

Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa

>cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors

Probab=100.00  E-value=1.6e-36  Score=268.24  Aligned_cols=254  Identities=10%  Similarity=0.087  Sum_probs=187.3

Q ss_pred             CeeEEEEEEeeccCceEEEEEEecCCC--CceEEEEecCCCCChH-HHHHHHHHhhhccccccccccceeeecccCeeEE
Q 018699           47 GKKYQIKGCAGQGGFAKVFKAYVNGDP--EDVVALKIQKPAFPWE-FYMYRQLDQRISGRERSSFGFAHRIHLYSDYSIL  123 (351)
Q Consensus        47 ~~~Y~i~~~lg~G~~g~V~~a~~~~~~--~~~vaiK~~~~~~~~e-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  123 (351)
                      .+.|++.+.||+|+||.||+|.+....  +..||+|.+....... ...+...........|+++.........++..++
T Consensus         3 ~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~l   82 (269)
T cd05065           3 VSCVKIEEVIGAGEFGEVCRGRLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNIIHLEGVVTKSRPVMI   82 (269)
T ss_pred             hHHeEEEeEecCCCCCeEEEEEEecCCCCceeEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCcCcceEEEEECCCCceEE
Confidence            357999999999999999999953222  3479999987653321 2222222233445678888888888888888999


Q ss_pred             EEEecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeeccCCCCCccc
Q 018699          124 VCDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSGPWQD  203 (351)
Q Consensus       124 v~e~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~~~~~~~~  203 (351)
                      ||||+++++|.+++...   +..+++..++.++.|++.|+.|||++|++|+||+|+||+++                 .+
T Consensus        83 v~e~~~~~~L~~~l~~~---~~~~~~~~~~~i~~~l~~al~~lH~~g~~H~dl~p~nili~-----------------~~  142 (269)
T cd05065          83 ITEFMENGALDSFLRQN---DGQFTVIQLVGMLRGIAAGMKYLSEMNYVHRDLAARNILVN-----------------SN  142 (269)
T ss_pred             EEecCCCCcHHHHHhhC---CCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccChheEEEc-----------------CC
Confidence            99999999999998764   35688999999999999999999999999999999999998                 67


Q ss_pred             CCeEEeecCCccccccCCCCccccccc---cCCCcccceeccCCCCCccchHhHHHHHHHHHHh-CccccccccCCCCCc
Q 018699          204 QGLCLVDWGRGIDLHLFPDNMEFEGDC---RTSGFRCIEMQEKKPWKFQVDTYGLCAIVHMMLH-NSYMEIEKKASPDGG  279 (351)
Q Consensus       204 ~~~~l~Dfg~a~~~~~~~~~~~~~~~~---g~~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~-g~~p~~~~~~~~~~~  279 (351)
                      +.++|+|||.+................   .+..|+|||.+.+..++.++||||+||++|++++ |..||..........
T Consensus       143 ~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l~e~l~~g~~p~~~~~~~~~~~  222 (269)
T cd05065         143 LVCKVSDFGLSRFLEDDTSDPTYTSSLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVIN  222 (269)
T ss_pred             CcEEECCCccccccccCccccccccccCCCcceeecCHhHhccCcccchhhhhhhHHHHHHHhcCCCCCCCCCCHHHHHH
Confidence            789999999875432211111111111   1346999999988889999999999999999886 999986533210000


Q ss_pred             ee-eecCcchhhhhHHHHHHHHHHHHhcCCCCCChHHHHHHHH
Q 018699          280 LV-YLPKLSFKRYWKVELWKSLFTNLLNMSSGNDKEVLQNLQK  321 (351)
Q Consensus       280 ~~-~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~~  321 (351)
                      .. .....+.+...+ ..+.+++.+||..+|++||++.+++..
T Consensus       223 ~i~~~~~~~~~~~~~-~~~~~li~~~l~~~p~~Rp~~~~i~~~  264 (269)
T cd05065         223 AIEQDYRLPPPMDCP-TALHQLMLDCWQKDRNARPKFGQIVST  264 (269)
T ss_pred             HHHcCCcCCCcccCC-HHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence            00 000111112223 678999999999999999999998864

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr

>cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1

Probab=100.00  E-value=1.7e-36  Score=267.19  Aligned_cols=247  Identities=13%  Similarity=0.106  Sum_probs=179.6

Q ss_pred             EEeeccCceEEEEEEecCC-----------CCceEEEEecCCCCChHHHHHHHHHhhhccccccccccceeeecccCeeE
Q 018699           54 GCAGQGGFAKVFKAYVNGD-----------PEDVVALKIQKPAFPWEFYMYRQLDQRISGRERSSFGFAHRIHLYSDYSI  122 (351)
Q Consensus        54 ~~lg~G~~g~V~~a~~~~~-----------~~~~vaiK~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  122 (351)
                      +.||.|+||.||+|++...           ....|++|++..........+......+....|++++....+.......+
T Consensus         1 ~~lg~G~~~~vy~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~~~~l~~l~hp~iv~~~~~~~~~~~~~   80 (262)
T cd05077           1 EHLGRGTRTQIYAGILNYKDDDEDDGYSYEKEIKVILKVLDPSHRDISLAFFETASMMRQVSHKHIVLLYGVCVRDVENI   80 (262)
T ss_pred             CccccCCcceEeeeecccCCCccccccchhhceeEEEeecChhhhhHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCCE
Confidence            3689999999999985221           23368999877654333333333334455667888888888887788889


Q ss_pred             EEEEecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeeccCCCCCcc
Q 018699          123 LVCDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSGPWQ  202 (351)
Q Consensus       123 lv~e~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~~~~~~~  202 (351)
                      +||||+++++|..++...   +..+++..++.++.||+.|++|||++||+|+||+|+||+++.+...          ...
T Consensus        81 lv~e~~~~~~l~~~~~~~---~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dlkp~Nill~~~~~~----------~~~  147 (262)
T cd05077          81 MVEEFVEFGPLDLFMHRK---SDVLTTPWKFKVAKQLASALSYLEDKDLVHGNVCTKNILLAREGID----------GEC  147 (262)
T ss_pred             EEEecccCCCHHHHHHhc---CCCCCHHHHHHHHHHHHHHHHHhhhCCeECCCCCcccEEEecCCcc----------CCC
Confidence            999999999999887653   4568999999999999999999999999999999999999843211          002


Q ss_pred             cCCeEEeecCCccccccCCCCccccccccCCCcccceecc-CCCCCccchHhHHHHHHHHHH-hCccccccccCCCCCce
Q 018699          203 DQGLCLVDWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQE-KKPWKFQVDTYGLCAIVHMML-HNSYMEIEKKASPDGGL  280 (351)
Q Consensus       203 ~~~~~l~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~-~~~~~~~~DiwslG~il~~l~-~g~~p~~~~~~~~~~~~  280 (351)
                      .+.++++|||.+....      ......++..|+|||.+. +..++.++|||||||++|+|+ .|..|+...........
T Consensus       148 ~~~~~l~d~g~~~~~~------~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~~~~~  221 (262)
T cd05077         148 GPFIKLSDPGIPITVL------SRQECVERIPWIAPECVEDSKNLSIAADKWSFGTTLWEICYNGEIPLKDKTLAEKERF  221 (262)
T ss_pred             CceeEeCCCCCCcccc------CcccccccccccChhhhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCcchhHHHHH
Confidence            2348999999875422      112234678899999886 466889999999999999998 57777764332210000


Q ss_pred             eeecCcchhhhhHHHHHHHHHHHHhcCCCCCChHHHHHHHH
Q 018699          281 VYLPKLSFKRYWKVELWKSLFTNLLNMSSGNDKEVLQNLQK  321 (351)
Q Consensus       281 ~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~~  321 (351)
                       ............ +.+.+||.+||+.||++||+..+++++
T Consensus       222 -~~~~~~~~~~~~-~~~~~li~~cl~~dp~~Rp~~~~il~~  260 (262)
T cd05077         222 -YEGQCMLVTPSC-KELADLMTHCMNYDPNQRPFFRAIMRD  260 (262)
T ss_pred             -HhcCccCCCCCh-HHHHHHHHHHcCCChhhCcCHHHHHHh
Confidence             001111111112 678999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom

>cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase

Probab=100.00  E-value=1.6e-36  Score=266.14  Aligned_cols=250  Identities=13%  Similarity=0.072  Sum_probs=188.1

Q ss_pred             CeeEEEEEEeeccCceEEEEEEecCCCCceEEEEecCCCCChHHHHHHHHHhhhccccccccccceeeecccCeeEEEEE
Q 018699           47 GKKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFPWEFYMYRQLDQRISGRERSSFGFAHRIHLYSDYSILVCD  126 (351)
Q Consensus        47 ~~~Y~i~~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e  126 (351)
                      ..+|++.+.||.|++|.||+|.+.  .++.+|+|.+......+.....++ .......++++.............++|||
T Consensus         3 ~~~~~~~~~ig~g~~g~v~~~~~~--~~~~~~~k~~~~~~~~~~~~~~e~-~~l~~l~~~~i~~~~~~~~~~~~~~~v~e   79 (256)
T cd05112           3 PSELTLVQEIGSGQFGLVWLGYWL--EKRKVAIKTIREGAMSEEDFIEEA-QVMMKLSHPKLVQLYGVCTERSPICLVFE   79 (256)
T ss_pred             hhHeEEEeeecCcccceEEEEEEe--CCCeEEEEECCCCCCCHHHHHHHH-HHHHhCCCCCeeeEEEEEccCCceEEEEE
Confidence            457999999999999999999852  357899999876544433333332 23344567777777777777888999999


Q ss_pred             ecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeeccCCCCCcccCCe
Q 018699          127 YLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSGPWQDQGL  206 (351)
Q Consensus       127 ~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~~~~~~~~~~~  206 (351)
                      |+++++|.+++...   ...+++..++.++.|++.++++||+.+++|+||+|+||+++                 .++.+
T Consensus        80 ~~~~~~L~~~~~~~---~~~~~~~~~~~~~~~l~~~l~~lH~~~i~h~dl~p~ni~i~-----------------~~~~~  139 (256)
T cd05112          80 FMEHGCLSDYLRAQ---RGKFSQETLLGMCLDVCEGMAYLESSNVIHRDLAARNCLVG-----------------ENQVV  139 (256)
T ss_pred             cCCCCcHHHHHHhC---ccCCCHHHHHHHHHHHHHHHHHHHHCCccccccccceEEEc-----------------CCCeE
Confidence            99999999998763   35688999999999999999999999999999999999998                 66779


Q ss_pred             EEeecCCccccccCCCCccccccccCCCcccceeccCCCCCccchHhHHHHHHHHHHh-CccccccccCCCCCce-eeec
Q 018699          207 CLVDWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQEKKPWKFQVDTYGLCAIVHMMLH-NSYMEIEKKASPDGGL-VYLP  284 (351)
Q Consensus       207 ~l~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~-g~~p~~~~~~~~~~~~-~~~~  284 (351)
                      +|+|||.+...... .........++..|+|||.+.+..++.++||||||+++|+|++ |..||........... ....
T Consensus       140 ~l~d~g~~~~~~~~-~~~~~~~~~~~~~~~aPe~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~  218 (256)
T cd05112         140 KVSDFGMTRFVLDD-QYTSSTGTKFPVKWSSPEVFSFSKYSSKSDVWSFGVLMWEVFSEGKTPYENRSNSEVVETINAGF  218 (256)
T ss_pred             EECCCcceeecccC-cccccCCCccchhhcCHhHhccCCcChHHHHHHHHHHHHHHHcCCCCCCCcCCHHHHHHHHhCCC
Confidence            99999988643211 1111122234567999999988888999999999999999998 8999864332100000 0000


Q ss_pred             CcchhhhhHHHHHHHHHHHHhcCCCCCChHHHHHHHH
Q 018699          285 KLSFKRYWKVELWKSLFTNLLNMSSGNDKEVLQNLQK  321 (351)
Q Consensus       285 ~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~~  321 (351)
                      ....+...+ +.+.+|+.+||+.+|++||++.++++.
T Consensus       219 ~~~~~~~~~-~~~~~l~~~~l~~~p~~Rp~~~~~l~~  254 (256)
T cd05112         219 RLYKPRLAS-QSVYELMQHCWKERPEDRPSFSLLLHQ  254 (256)
T ss_pred             CCCCCCCCC-HHHHHHHHHHcccChhhCCCHHHHHHh
Confidence            111122223 789999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ

>cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5

Probab=100.00  E-value=1.3e-36  Score=277.22  Aligned_cols=256  Identities=21%  Similarity=0.258  Sum_probs=190.0

Q ss_pred             CeeEEEEEEeeccCceEEEEEEecCCCCceEEEEecCCCCCh---HHHHHHHHHhhhccccccccccceeeec----ccC
Q 018699           47 GKKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFPW---EFYMYRQLDQRISGRERSSFGFAHRIHL----YSD  119 (351)
Q Consensus        47 ~~~Y~i~~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~~~---e~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~  119 (351)
                      +++|++.+.||.|++|.||+|. +..+++.||+|.+......   ......++ .......|++++....++.    ...
T Consensus         4 ~~~y~~~~~lg~g~~g~v~~~~-~~~~~~~valK~~~~~~~~~~~~~~~~~e~-~~l~~l~h~~iv~~~~~~~~~~~~~~   81 (334)
T cd07855           4 GSRYKPIENIGSGAYGVVCSAI-DTRSGKKVAIKKIPHAFDVPTLAKRTLREL-KILRHFKHDNIIAIRDILRPPGADFK   81 (334)
T ss_pred             hhceeeeeeeecCCCeEEEEEE-EcCCCCEEEEEEeccccccccchHHHHHHH-HHHHhcCCCCccCHHHhccccCCCCc
Confidence            4789999999999999999999 5677899999998754321   11122222 2233445677776665543    245


Q ss_pred             eeEEEEEecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeeccCCCC
Q 018699          120 YSILVCDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSG  199 (351)
Q Consensus       120 ~~~lv~e~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~~~~  199 (351)
                      ..|+||||+ +++|.+++..    +..+++..++.++.|++.||.|||++|++|+||+|+||+++               
T Consensus        82 ~~~lv~e~~-~~~l~~~~~~----~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~Nil~~---------------  141 (334)
T cd07855          82 DVYVVMDLM-ESDLHHIIHS----DQPLTEEHIRYFLYQLLRGLKYIHSANVIHRDLKPSNLLVN---------------  141 (334)
T ss_pred             eEEEEEehh-hhhHHHHhcc----CCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEc---------------
Confidence            789999999 5689888876    46799999999999999999999999999999999999999               


Q ss_pred             CcccCCeEEeecCCccccccCCC--CccccccccCCCcccceeccC-CCCCccchHhHHHHHHHHHHhCccccccccCCC
Q 018699          200 PWQDQGLCLVDWGRGIDLHLFPD--NMEFEGDCRTSGFRCIEMQEK-KPWKFQVDTYGLCAIVHMMLHNSYMEIEKKASP  276 (351)
Q Consensus       200 ~~~~~~~~l~Dfg~a~~~~~~~~--~~~~~~~~g~~~y~aPE~~~~-~~~~~~~DiwslG~il~~l~~g~~p~~~~~~~~  276 (351)
                        .++.++|+|||++........  ........++..|+|||.+.+ ..++.++||||+||++|+|++|..||.......
T Consensus       142 --~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~l~el~~g~~pf~~~~~~~  219 (334)
T cd07855         142 --EDCELRIGDFGMARGLSSSPTEHKYFMTEYVATRWYRAPELLLSLPEYTTAIDMWSVGCIFAEMLGRRQLFPGKNYVH  219 (334)
T ss_pred             --CCCcEEecccccceeecccCcCCCcccccccccccccChHHhcCCcccccccchHHHHHHHHHHHcCCCccCCCChHH
Confidence              778899999998865432211  111234568889999999865 457899999999999999999999996433210


Q ss_pred             C--------C--------------------ceeeecCcchh---hhhHHHHHHHHHHHHhcCCCCCChHHHHHHHHHHHH
Q 018699          277 D--------G--------------------GLVYLPKLSFK---RYWKVELWKSLFTNLLNMSSGNDKEVLQNLQKSFQD  325 (351)
Q Consensus       277 ~--------~--------------------~~~~~~~~~~~---~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~~~~~~  325 (351)
                      .        +                    ...........   ...+ +.+.++|.+||+.||++||++.+++.|+|..
T Consensus       220 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~li~~~l~~~P~~Rpt~~~~l~~~~~~  298 (334)
T cd07855         220 QLKLILSVLGSPSEEVLNRIGSDRVRKYIQNLPRKQPVPWSKIFPKAS-PEALDLLSQMLQFDPEERITVEQALQHPFLA  298 (334)
T ss_pred             HHHHHHHHhCCChhHhhhhhchhhHHHHHhhcccCCCCCHHHHcccCC-HHHHHHHHHHccCChhhCcCHHHHHhChhhh
Confidence            0        0                    00000111111   1123 7799999999999999999999999998865


Q ss_pred             HH
Q 018699          326 YL  327 (351)
Q Consensus       326 ~~  327 (351)
                      .+
T Consensus       299 ~~  300 (334)
T cd07855         299 QY  300 (334)
T ss_pred             hc
Confidence            43

Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the

>KOG0587 consensus Traf2- and Nck-interacting kinase and related germinal center kinase (GCK) family protein kinases [Signal transduction mechanisms]

Probab=100.00  E-value=1.6e-36  Score=286.25  Aligned_cols=274  Identities=18%  Similarity=0.224  Sum_probs=222.1

Q ss_pred             CeeEEEEEEeeccCceEEEEEEecCCCCceEEEEecCCCCChHHHHHHHHHhhhccccccccccceeeec-----ccCee
Q 018699           47 GKKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFPWEFYMYRQLDQRISGRERSSFGFAHRIHL-----YSDYS  121 (351)
Q Consensus        47 ~~~Y~i~~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~  121 (351)
                      .+.++|.+.||.|.+|.||+++ ...+++.+|+|+.......+.++..+..-......|++.+.+..++.     .++.+
T Consensus        18 ~d~~ei~evig~Gtygkv~k~k-~~~~~~~aa~kI~~~~~d~deEiE~eynil~~~~~hpnv~~fyg~~~k~~~~~~DqL   96 (953)
T KOG0587|consen   18 ADIFEIIEVIGNGTYGKVYKGR-HVKTGQLAAIKIMDPTEDEEEEIELEYNMLKKYSHHPNVATFYGAFIKKDPGNGDQL   96 (953)
T ss_pred             CCccEEEEEEeeccceeEEEEe-eeecCceeeeEeecCCccccHHHHHHHHHHHhccCCCCcceEEEEEEEecCCCCCeE
Confidence            3679999999999999999999 67888999999988765544444433333333456677666665543     36899


Q ss_pred             EEEEEecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeeccCCCCCc
Q 018699          122 ILVCDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSGPW  201 (351)
Q Consensus       122 ~lv~e~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~~~~~~  201 (351)
                      |+|||||.|||..++++...  +..+.|+.+.+|++.++.|+.+||.+.++|||||-.||+++                 
T Consensus        97 WLVMEfC~gGSVTDLVKn~~--g~rl~E~~IaYI~re~lrgl~HLH~nkviHRDikG~NiLLT-----------------  157 (953)
T KOG0587|consen   97 WLVMEFCGGGSVTDLVKNTK--GNRLKEEWIAYILREILRGLAHLHNNKVIHRDIKGQNVLLT-----------------  157 (953)
T ss_pred             EEEeeccCCccHHHHHhhhc--ccchhhHHHHHHHHHHHHHHHHHhhcceeeecccCceEEEe-----------------
Confidence            99999999999999999876  78999999999999999999999999999999999999999                 


Q ss_pred             ccCCeEEeecCCccccccCCCCccccccccCCCcccceecc-----CCCCCccchHhHHHHHHHHHHhCccccccccCCC
Q 018699          202 QDQGLCLVDWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQE-----KKPWKFQVDTYGLCAIVHMMLHNSYMEIEKKASP  276 (351)
Q Consensus       202 ~~~~~~l~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~-----~~~~~~~~DiwslG~il~~l~~g~~p~~~~~~~~  276 (351)
                      .++.+||+|||.+...+.  ......+.+||+.|||||++.     ...|+..+|+||||++..||.-|.+|+....+..
T Consensus       158 ~e~~VKLvDFGvSaQlds--T~grRnT~iGtP~WMAPEViac~e~~d~tyd~R~D~WsLGITaIEladG~PPl~DmHPmr  235 (953)
T KOG0587|consen  158 ENAEVKLVDFGVSAQLDS--TVGRRNTFIGTPYWMAPEVIACDESPDATYDYRSDLWSLGITAIEMAEGAPPLCDMHPMR  235 (953)
T ss_pred             ccCcEEEeeeeeeeeeec--ccccccCcCCCcccccceeeecccCCCCCcccccchhhccceeehhcCCCCCccCcchhh
Confidence            888999999998865432  234456778999999999983     3467799999999999999999999998776653


Q ss_pred             CCceee---ecCcchhhhhHHHHHHHHHHHHhcCCCCCChHHHHHHHHHHHHHHhhChHHHHHHHHHHHH
Q 018699          277 DGGLVY---LPKLSFKRYWKVELWKSLFTNLLNMSSGNDKEVLQNLQKSFQDYLCSNPQLLKNLKELLAK  343 (351)
Q Consensus       277 ~~~~~~---~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~~~~~~~~~~~~~~~~~~~~~~~~  343 (351)
                      ....+.   ++...-|..|+ +.+.+||..||.+|-.+||+..++|.|||..-...+.++...++.+..+
T Consensus       236 aLF~IpRNPPPkLkrp~kWs-~~FndFIs~cL~Kd~e~RP~~~~ll~hpFi~e~~~e~qir~~ik~~~~~  304 (953)
T KOG0587|consen  236 ALFLIPRNPPPKLKRPKKWS-KKFNDFISTCLVKDYEQRPSTEELLKHPFITEQPNERQVRIQIKDHIDR  304 (953)
T ss_pred             hhccCCCCCCccccchhhHH-HHHHHHHHHHHhhccccCcchhhhccCCcccccccHHHHHHHHHHHHhh
Confidence            322221   23333478899 9999999999999999999999999999977555666777777766655

>cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3

Probab=100.00  E-value=1.5e-36  Score=270.42  Aligned_cols=250  Identities=19%  Similarity=0.208  Sum_probs=186.9

Q ss_pred             eEEEEEEeeccCceEEEEEEecCCCCceEEEEecCCCCChH---HHHHHHHHhhhccccccccccceeeecccCeeEEEE
Q 018699           49 KYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFPWE---FYMYRQLDQRISGRERSSFGFAHRIHLYSDYSILVC  125 (351)
Q Consensus        49 ~Y~i~~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~~~e---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~  125 (351)
                      +|++.+.||.|++|.||+|+ +..+++.||||.+......+   .....+ ........|+++.........++..++||
T Consensus         1 ~y~~~~~l~~g~~~~v~~~~-~~~~~~~~~ik~~~~~~~~~~~~~~~~~E-~~~l~~l~h~~i~~~~~~~~~~~~~~~v~   78 (284)
T cd07860           1 NFQKVEKIGEGTYGVVYKAR-NKLTGEVVALKKIRLDTETEGVPSTAIRE-ISLLKELNHPNIVKLLDVIHTENKLYLVF   78 (284)
T ss_pred             CceeeeeecCCCceEEEEEE-ECCCCCEEEEEEccccccccccchHHHHH-HHHHHhcCCCCCcchhhhcccCCcEEEEe
Confidence            48999999999999999999 56778999999886442211   112222 22334456778888888888888999999


Q ss_pred             EecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeeccCCCCCcccCC
Q 018699          126 DYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSGPWQDQG  205 (351)
Q Consensus       126 e~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~~~~~~~~~~  205 (351)
                      ||+. ++|..++....  +..+++..++.++.|++.|++|||+.|++|+||+|+||+++                 .++.
T Consensus        79 e~~~-~~l~~~~~~~~--~~~l~~~~~~~~~~~i~~~l~~lh~~~i~H~~l~p~nill~-----------------~~~~  138 (284)
T cd07860          79 EFLH-QDLKKFMDASP--LSGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLIN-----------------TEGA  138 (284)
T ss_pred             eccc-cCHHHHHHhCC--CCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEC-----------------CCCC
Confidence            9994 68988886532  35689999999999999999999999999999999999999                 6778


Q ss_pred             eEEeecCCccccccCCCCccccccccCCCcccceeccCCC-CCccchHhHHHHHHHHHHhCccccccccCCCC-------
Q 018699          206 LCLVDWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQEKKP-WKFQVDTYGLCAIVHMMLHNSYMEIEKKASPD-------  277 (351)
Q Consensus       206 ~~l~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~-~~~~~DiwslG~il~~l~~g~~p~~~~~~~~~-------  277 (351)
                      ++|+|||.+.....  .........++..|+|||.+.+.. ++.++||||||+++|+|++|..||........       
T Consensus       139 ~~l~dfg~~~~~~~--~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~  216 (284)
T cd07860         139 IKLADFGLARAFGV--PVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRT  216 (284)
T ss_pred             EEEeeccchhhccc--CccccccccccccccCCeEEecCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHH
Confidence            99999998764321  112223335678899999886644 57899999999999999999999854322100       


Q ss_pred             ------C-------------ceeeecCcch---hhhhHHHHHHHHHHHHhcCCCCCChHHHHHHHHHH
Q 018699          278 ------G-------------GLVYLPKLSF---KRYWKVELWKSLFTNLLNMSSGNDKEVLQNLQKSF  323 (351)
Q Consensus       278 ------~-------------~~~~~~~~~~---~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~~~~  323 (351)
                            .             .+........   ....+ ..++++|.+||+.||.+||++.+++.|||
T Consensus       217 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~li~~~l~~~P~~Rpt~~~~l~~~~  283 (284)
T cd07860         217 LGTPDEVVWPGVTSLPDYKPSFPKWARQDFSKVVPPLD-EDGRDLLSQMLHYDPNKRISAKAALAHPF  283 (284)
T ss_pred             hCCCChhhhhhhhHHHHHHhhcccccccCHHHHcccCC-HHHHHHHHHhcCCCcccCCCHHHHhcCCC
Confidence                  0             0000000000   01122 67889999999999999999999999986

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex

>cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl

Probab=100.00  E-value=1.3e-36  Score=269.12  Aligned_cols=252  Identities=11%  Similarity=0.086  Sum_probs=179.7

Q ss_pred             EEEEEeeccCceEEEEEEecCCCCc--eEEEEecCCCCChH--HHHHHHHHhhhccccccccccceeeecc------cCe
Q 018699           51 QIKGCAGQGGFAKVFKAYVNGDPED--VVALKIQKPAFPWE--FYMYRQLDQRISGRERSSFGFAHRIHLY------SDY  120 (351)
Q Consensus        51 ~i~~~lg~G~~g~V~~a~~~~~~~~--~vaiK~~~~~~~~e--~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~  120 (351)
                      .+.+.||+|+||.||+|++ ..++.  .||+|.+.......  ...+...........|++++........      ...
T Consensus         2 ~i~~~ig~G~~g~V~~~~~-~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~   80 (272)
T cd05075           2 ALGKTLGEGEFGSVMEGQL-NQDDSILKVAVKTMKIAICTRSEMEDFLSEAVCMKEFDHPNVMRLIGVCLQTVESEGYPS   80 (272)
T ss_pred             ccccccCcccCceEEEeEE-ccCCCeeeEEEEecccCcCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEccCCcccCCCC
Confidence            4678999999999999995 33343  68999887553222  2222222233444567777776654321      235


Q ss_pred             eEEEEEecCCCCHHHHHHHHH--hhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeeccCCC
Q 018699          121 SILVCDYLSQGTLQDAINSYV--VIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRS  198 (351)
Q Consensus       121 ~~lv~e~~~~~sL~~~l~~~~--~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~~~  198 (351)
                      .+++|||+++++|.+++....  .....+++..+..++.|++.|+.|||++||+|+||||+||+++              
T Consensus        81 ~~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~Nil~~--------------  146 (272)
T cd05075          81 PVVILPFMKHGDLHSFLLYSRLGDCPQYLPTQMLVKFMTDIASGMEYLSSKSFIHRDLAARNCMLN--------------  146 (272)
T ss_pred             cEEEEEeCCCCcHHHHHHHhcccCCcccCCHHHHHHHHHHHHHHHHHHHHCCeeccccchhheEEc--------------
Confidence            689999999999998875421  1124588999999999999999999999999999999999998              


Q ss_pred             CCcccCCeEEeecCCccccccCCCCccccccccCCCcccceeccCCCCCccchHhHHHHHHHHHHh-CccccccccCCCC
Q 018699          199 GPWQDQGLCLVDWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQEKKPWKFQVDTYGLCAIVHMMLH-NSYMEIEKKASPD  277 (351)
Q Consensus       199 ~~~~~~~~~l~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~-g~~p~~~~~~~~~  277 (351)
                         .++.++|+|||++................+++.|++||...+..++.++|||||||++|+|++ |..||........
T Consensus       147 ---~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~  223 (272)
T cd05075         147 ---ENMNVCVADFGLSKKIYNGDYYRQGRIAKMPVKWIAIESLADRVYTTKSDVWSFGVTMWEIATRGQTPYPGVENSEI  223 (272)
T ss_pred             ---CCCCEEECCCCcccccCcccceecCCcccCCcccCCHHHccCCCcChHHHHHHHHHHHHHHHcCCCCCCCCCCHHHH
Confidence               677899999999865422111011112235667999999988889999999999999999999 7888864322100


Q ss_pred             Ccee-eecCcchhhhhHHHHHHHHHHHHhcCCCCCChHHHHHHHH
Q 018699          278 GGLV-YLPKLSFKRYWKVELWKSLFTNLLNMSSGNDKEVLQNLQK  321 (351)
Q Consensus       278 ~~~~-~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~~  321 (351)
                      .... .......+..+. +.+.++|.+||+.||++||++.+++.+
T Consensus       224 ~~~~~~~~~~~~~~~~~-~~~~~li~~~l~~~p~~Rps~~~l~~~  267 (272)
T cd05075         224 YDYLRQGNRLKQPPDCL-DGLYSLMSSCWLLNPKDRPSFETLRCE  267 (272)
T ss_pred             HHHHHcCCCCCCCCCCC-HHHHHHHHHHcCCCcccCcCHHHHHHH
Confidence            0000 011112222333 778999999999999999999999876

Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor

>cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors

Probab=100.00  E-value=1.6e-36  Score=267.96  Aligned_cols=255  Identities=13%  Similarity=0.106  Sum_probs=188.9

Q ss_pred             cCeeEEEEEEeeccCceEEEEEEecCC--CCceEEEEecCCCCChHH-HHHHHHHhhhccccccccccceeeecccCeeE
Q 018699           46 GGKKYQIKGCAGQGGFAKVFKAYVNGD--PEDVVALKIQKPAFPWEF-YMYRQLDQRISGRERSSFGFAHRIHLYSDYSI  122 (351)
Q Consensus        46 ~~~~Y~i~~~lg~G~~g~V~~a~~~~~--~~~~vaiK~~~~~~~~e~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  122 (351)
                      ..++|++.+.||+|+||.||+|.+...  .+..+|+|.+........ ..+...........|+++.........++..|
T Consensus         2 ~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~   81 (267)
T cd05066           2 DASCIKIEKVIGAGEFGEVCSGRLKLPGKREIPVAIKTLKAGYTEKQRRDFLSEASIMGQFDHPNIIHLEGVVTKSKPVM   81 (267)
T ss_pred             CHHHeEeeeeecccCCCceEEEEEecCCCCceEEEEEECCCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEecCCccE
Confidence            356899999999999999999985322  234799999876543221 11111122334456788888888888888999


Q ss_pred             EEEEecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeeccCCCCCcc
Q 018699          123 LVCDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSGPWQ  202 (351)
Q Consensus       123 lv~e~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~~~~~~~  202 (351)
                      +||||+++++|.+++...   +..++..++..++.|++.|+.+||++|++|+||+|+||+++                 .
T Consensus        82 lv~e~~~~~~L~~~~~~~---~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlkp~nili~-----------------~  141 (267)
T cd05066          82 IVTEYMENGSLDAFLRKH---DGQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILVN-----------------S  141 (267)
T ss_pred             EEEEcCCCCCHHHHHHhc---CCCCCHHHHHHHHHHHHHHHHHHHHCCEeehhhchhcEEEC-----------------C
Confidence            999999999999999764   35688999999999999999999999999999999999998                 6


Q ss_pred             cCCeEEeecCCccccccCCCCc-cccccccCCCcccceeccCCCCCccchHhHHHHHHHHHHh-CccccccccCCCCCce
Q 018699          203 DQGLCLVDWGRGIDLHLFPDNM-EFEGDCRTSGFRCIEMQEKKPWKFQVDTYGLCAIVHMMLH-NSYMEIEKKASPDGGL  280 (351)
Q Consensus       203 ~~~~~l~Dfg~a~~~~~~~~~~-~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~-g~~p~~~~~~~~~~~~  280 (351)
                      ++.++|+|||++.......... ......++..|+|||.+.+..++.++|+|||||++|++++ |..||...........
T Consensus       142 ~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~l~ell~~g~~p~~~~~~~~~~~~  221 (267)
T cd05066         142 NLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWEMSNQDVIKA  221 (267)
T ss_pred             CCeEEeCCCCcccccccccceeeecCCCccceeecCHhHhccCccCchhhhHHHHHHHHHHhcCCCCCcccCCHHHHHHH
Confidence            7789999999886543211111 1111223457999999988889999999999999999886 9999865432100000


Q ss_pred             -eeecCcchhhhhHHHHHHHHHHHHhcCCCCCChHHHHHHHH
Q 018699          281 -VYLPKLSFKRYWKVELWKSLFTNLLNMSSGNDKEVLQNLQK  321 (351)
Q Consensus       281 -~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~~  321 (351)
                       ......+.+...+ ..+.+++.+||+++|.+||++.+++..
T Consensus       222 ~~~~~~~~~~~~~~-~~~~~li~~~l~~~p~~Rp~~~~i~~~  262 (267)
T cd05066         222 IEEGYRLPAPMDCP-AALHQLMLDCWQKDRNERPKFEQIVSI  262 (267)
T ss_pred             HhCCCcCCCCCCCC-HHHHHHHHHHcccCchhCCCHHHHHHH
Confidence             0000111122223 678999999999999999999998764

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul

>cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta

Probab=100.00  E-value=1.9e-36  Score=281.22  Aligned_cols=265  Identities=11%  Similarity=0.041  Sum_probs=194.6

Q ss_pred             cceEEEEcCeeEEEEEEeeccCceEEEEEEec----CCCCceEEEEecCCCCChH-HHHHHHHHhhhcccc-ccccccce
Q 018699           39 RNKTIEIGGKKYQIKGCAGQGGFAKVFKAYVN----GDPEDVVALKIQKPAFPWE-FYMYRQLDQRISGRE-RSSFGFAH  112 (351)
Q Consensus        39 ~~~~~~i~~~~Y~i~~~lg~G~~g~V~~a~~~----~~~~~~vaiK~~~~~~~~e-~~~~~~~~~~~~~~~-~~~~~~~~  112 (351)
                      ....+.+..++|.+.+.||.|+||.||+|++.    ...++.||+|++....... ...+......+.... |++++...
T Consensus        28 ~~~~~~~~~~~~~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~E~~~l~~l~~H~niv~~~  107 (401)
T cd05107          28 YDSAWEMPRDNLVLGRTLGSGAFGRVVEATAHGLSHSQSTMKVAVKMLKSTARSSEKQALMSELKIMSHLGPHLNIVNLL  107 (401)
T ss_pred             CCCcceecHHHeehhhhccCCCceeEEEEEEcCCCCCCCceEEEEEecCCCCChhHHHHHHHHHHHHHhcCCCCCeEEEE
Confidence            34457888899999999999999999999863    2345789999997653322 111211222223333 78888888


Q ss_pred             eeecccCeeEEEEEecCCCCHHHHHHHHHh--------------------------------------------------
Q 018699          113 RIHLYSDYSILVCDYLSQGTLQDAINSYVV--------------------------------------------------  142 (351)
Q Consensus       113 ~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~--------------------------------------------------  142 (351)
                      ..+...+..++||||+++|+|.+++.....                                                  
T Consensus       108 ~~~~~~~~~~iv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  187 (401)
T cd05107         108 GACTKGGPIYIITEYCRYGDLVDYLHRNKHTFLQYYLDKNRDDGSLISGGSTPLSQRKSHVSLGSESDGGYMDMSKDESA  187 (401)
T ss_pred             EEEccCCCcEEEEeccCCCcHHHHHHhccccchhhhcccccccccccccccccccccccchhhhhccCccccccCCcccc
Confidence            888778889999999999999999875311                                                  


Q ss_pred             --------------------------------------------hCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCC
Q 018699          143 --------------------------------------------IGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKP  178 (351)
Q Consensus       143 --------------------------------------------~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p  178 (351)
                                                                  ....++...++.++.|++.|+.|||+.+++|+||+|
T Consensus       188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrdlkp  267 (401)
T cd05107         188 DYVPMQDMKGTVKYADIESSNYESPYDQYLPSAPERTRRDTLINESPALSYMDLVGFSYQVANGMEFLASKNCVHRDLAA  267 (401)
T ss_pred             CccchhcchhhhhhhhhhccCcCCchhhhhcccCCCcchhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCcCcccCCc
Confidence                                                        012356677889999999999999999999999999


Q ss_pred             CcEEEeecCCcceeeccCCCCCcccCCeEEeecCCccccccCCCCccccccccCCCcccceeccCCCCCccchHhHHHHH
Q 018699          179 DNLLIRYARDELTVLDHDRSGPWQDQGLCLVDWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQEKKPWKFQVDTYGLCAI  258 (351)
Q Consensus       179 ~Nill~~~~~~~~~~~~~~~~~~~~~~~~l~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~i  258 (351)
                      +||+++                 ..+.++|+|||++................++..|+|||.+.+..++.++||||+|++
T Consensus       268 ~NiLl~-----------------~~~~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvi  330 (401)
T cd05107         268 RNVLIC-----------------EGKLVKICDFGLARDIMRDSNYISKGSTFLPLKWMAPESIFNNLYTTLSDVWSFGIL  330 (401)
T ss_pred             ceEEEe-----------------CCCEEEEEecCcceecccccccccCCCcCCCCceeChHHhcCCCCCcHhHHHHHHHH
Confidence            999998                 667799999999864321111111223356788999999988888999999999999


Q ss_pred             HHHHHh-CccccccccCCCCC-ce-eeecCcchhhhhHHHHHHHHHHHHhcCCCCCChHHHHHHHH
Q 018699          259 VHMMLH-NSYMEIEKKASPDG-GL-VYLPKLSFKRYWKVELWKSLFTNLLNMSSGNDKEVLQNLQK  321 (351)
Q Consensus       259 l~~l~~-g~~p~~~~~~~~~~-~~-~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~~  321 (351)
                      +|+|++ |..||......... .. ........+...+ ..+.+||.+||.++|.+||++.+++..
T Consensus       331 l~e~l~~g~~P~~~~~~~~~~~~~~~~~~~~~~p~~~~-~~l~~li~~cl~~~P~~RPs~~ell~~  395 (401)
T cd05107         331 LWEIFTLGGTPYPELPMNEQFYNAIKRGYRMAKPAHAS-DEIYEIMQKCWEEKFEIRPDFSQLVHL  395 (401)
T ss_pred             HHHHHHcCCCCCCCCCchHHHHHHHHcCCCCCCCCCCC-HHHHHHHHHHcCCChhHCcCHHHHHHH
Confidence            999998 88887543221100 00 0011112233334 789999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D

>cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins

Probab=100.00  E-value=6.2e-37  Score=269.63  Aligned_cols=246  Identities=21%  Similarity=0.171  Sum_probs=186.2

Q ss_pred             eeccCceEEEEEEecCCCCceEEEEecCCCCChH---HHHHHHHHhhhccccccccccceeeecccCeeEEEEEecCCCC
Q 018699           56 AGQGGFAKVFKAYVNGDPEDVVALKIQKPAFPWE---FYMYRQLDQRISGRERSSFGFAHRIHLYSDYSILVCDYLSQGT  132 (351)
Q Consensus        56 lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~~~e---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~s  132 (351)
                      ||.|++|.||+|. +..+|+.+++|++.......   ...............|+++.........++..|+++||+++++
T Consensus         1 lg~g~~~~vy~~~-~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~   79 (265)
T cd05579           1 ISKGAYGRVFLAK-KKSTGDIYAIKVIKKADMIRKNQVDQVLTERDILSQAQSPYVVKLYYSFQGKKNLYLVMEYLPGGD   79 (265)
T ss_pred             CCCCCceEEEEEE-ECCCCCEEEEEEecchhhhhhhHHHHHHHHHHHHHhCCCcchhHHHHheecCcEEEEEEecCCCCc
Confidence            6899999999999 56778999999987654321   1112211222334457777777777777889999999999999


Q ss_pred             HHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeeccCCCCCcccCCeEEeecC
Q 018699          133 LQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSGPWQDQGLCLVDWG  212 (351)
Q Consensus       133 L~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~~~~~~~~~~~~l~Dfg  212 (351)
                      |.+++.+.    ..+++..++.++.|++.||.+||++|++|+||+|+||+++                 .++.++|+|||
T Consensus        80 L~~~l~~~----~~~~~~~~~~i~~qi~~~L~~lH~~~i~H~di~~~nil~~-----------------~~~~~~l~dfg  138 (265)
T cd05579          80 LASLLENV----GSLDEDVARIYIAEIVLALEYLHSNGIIHRDLKPDNILID-----------------SNGHLKLTDFG  138 (265)
T ss_pred             HHHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHHcCeecCCCCHHHeEEc-----------------CCCCEEEEecc
Confidence            99999873    5789999999999999999999999999999999999999                 67789999999


Q ss_pred             CccccccCCC------CccccccccCCCcccceeccCCCCCccchHhHHHHHHHHHHhCccccccccCCCCCceeeecCc
Q 018699          213 RGIDLHLFPD------NMEFEGDCRTSGFRCIEMQEKKPWKFQVDTYGLCAIVHMMLHNSYMEIEKKASPDGGLVYLPKL  286 (351)
Q Consensus       213 ~a~~~~~~~~------~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~  286 (351)
                      ++........      ........++..|++||...+..++.++|+||||+++|++++|..||.................
T Consensus       139 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~  218 (265)
T cd05579         139 LSKVGLVRRQINLNDDEKEDKRIVGTPDYIAPEVILGQGHSKTVDWWSLGCILYEFLVGIPPFHGETPEEIFQNILNGKI  218 (265)
T ss_pred             cchhcccCcccccccccccccCcccCccccCHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCc
Confidence            8764321111      1122334577889999999888788999999999999999999999865432210000000011


Q ss_pred             chhhh--hHHHHHHHHHHHHhcCCCCCChHH---HHHHHHHHH
Q 018699          287 SFKRY--WKVELWKSLFTNLLNMSSGNDKEV---LQNLQKSFQ  324 (351)
Q Consensus       287 ~~~~~--~~~~~~~~li~~~L~~dP~~R~s~---~e~l~~~~~  324 (351)
                      ..+..  .+ ..+.++|.+||+.+|.+||++   .+++.|+|.
T Consensus       219 ~~~~~~~~~-~~~~~~i~~~l~~~p~~Rpt~~~~~~~l~~~~~  260 (265)
T cd05579         219 EWPEDVEVS-DEAIDLISKLLVPDPEKRLGAKSIEEIKNHPFF  260 (265)
T ss_pred             CCCccccCC-HHHHHHHHHHhcCCHhhcCCCccHHHHhcCccc
Confidence            11111  13 788999999999999999999   999998864

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re

>cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4

Probab=100.00  E-value=1.7e-36  Score=274.25  Aligned_cols=260  Identities=12%  Similarity=0.082  Sum_probs=189.1

Q ss_pred             EEEcCeeEEEEEEeeccCceEEEEEEec------CCCCceEEEEecCCCCChH-H-HHHHHHHhhhccc-ccccccccee
Q 018699           43 IEIGGKKYQIKGCAGQGGFAKVFKAYVN------GDPEDVVALKIQKPAFPWE-F-YMYRQLDQRISGR-ERSSFGFAHR  113 (351)
Q Consensus        43 ~~i~~~~Y~i~~~lg~G~~g~V~~a~~~------~~~~~~vaiK~~~~~~~~e-~-~~~~~~~~~~~~~-~~~~~~~~~~  113 (351)
                      +.+..++|.+.+.||+|+||.||+|.+.      ......+|+|.+....... . ....++. ..... .+++++....
T Consensus         7 ~~~~~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~-~l~~l~~h~~iv~~~~   85 (314)
T cd05099           7 WEFPRDRLVLGKPLGEGCFGQVVRAEAYGIDKSRPDQTVTVAVKMLKDNATDKDLADLISEME-LMKLIGKHKNIINLLG   85 (314)
T ss_pred             ccccHHHeeeeeeecCCCcccEEEeeecccCCccCCcceEEEEEecCCCCChHHHHHHHHHHH-HHHhccCCCCeeeEEE
Confidence            4566789999999999999999999742      2235679999987543321 1 1222222 22222 4788888888


Q ss_pred             eecccCeeEEEEEecCCCCHHHHHHHHHh------------hCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcE
Q 018699          114 IHLYSDYSILVCDYLSQGTLQDAINSYVV------------IGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNL  181 (351)
Q Consensus       114 ~~~~~~~~~lv~e~~~~~sL~~~l~~~~~------------~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Ni  181 (351)
                      ++...+..+++|||+++++|.+++.....            ....++...+..++.|++.|+.|||++|++|+||+|+||
T Consensus        86 ~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~gi~H~dlkp~Ni  165 (314)
T cd05099          86 VCTQEGPLYVIVEYAAKGNLREFLRARRPPGPDYTFDITKVPEEQLSFKDLVSCAYQVARGMEYLESRRCIHRDLAARNV  165 (314)
T ss_pred             EEccCCceEEEEecCCCCcHHHHHHhcCCCcccccccccCCcccccCHHHHHHHHHHHHHHHHHHHHCCeeeccccceeE
Confidence            77778889999999999999999976421            013578889999999999999999999999999999999


Q ss_pred             EEeecCCcceeeccCCCCCcccCCeEEeecCCccccccCCCCccccccccCCCcccceeccCCCCCccchHhHHHHHHHH
Q 018699          182 LIRYARDELTVLDHDRSGPWQDQGLCLVDWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQEKKPWKFQVDTYGLCAIVHM  261 (351)
Q Consensus       182 ll~~~~~~~~~~~~~~~~~~~~~~~~l~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~  261 (351)
                      +++                 .++.++|+|||.+................++..|+|||.+.+..++.++||||||+++|+
T Consensus       166 ll~-----------------~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~e  228 (314)
T cd05099         166 LVT-----------------EDNVMKIADFGLARGVHDIDYYKKTSNGRLPVKWMAPEALFDRVYTHQSDVWSFGILMWE  228 (314)
T ss_pred             EEc-----------------CCCcEEEccccccccccccccccccccCCCCccccCHHHHccCCcCccchhhHHHHHHHH
Confidence            998                 677799999999864332111111112233467999999988889999999999999999


Q ss_pred             HHh-CccccccccCCCCCce-eeecCcchhhhhHHHHHHHHHHHHhcCCCCCChHHHHHHHH
Q 018699          262 MLH-NSYMEIEKKASPDGGL-VYLPKLSFKRYWKVELWKSLFTNLLNMSSGNDKEVLQNLQK  321 (351)
Q Consensus       262 l~~-g~~p~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~~  321 (351)
                      |++ |..||........... ........+...+ ..+.++|.+||+.||++||++.+++..
T Consensus       229 l~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~-~~l~~li~~cl~~~p~~Rps~~~ll~~  289 (314)
T cd05099         229 IFTLGGSPYPGIPVEELFKLLREGHRMDKPSNCT-HELYMLMRECWHAVPTQRPTFKQLVEA  289 (314)
T ss_pred             HHhCCCCCCCCCCHHHHHHHHHcCCCCCCCCCCC-HHHHHHHHHHcCCCcccCcCHHHHHHH
Confidence            998 8888754322100000 0011111222233 678899999999999999999998864

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>KOG4236 consensus Serine/threonine protein kinase PKC mu/PKD and related proteins [Signal transduction mechanisms]

Probab=100.00  E-value=8.2e-38  Score=280.14  Aligned_cols=251  Identities=19%  Similarity=0.247  Sum_probs=204.1

Q ss_pred             eEEE--EEEeeccCceEEEEEEecCCCCceEEEEecCCC-CC-hHHHHHHHHHhhhccccccccccceeeecccCeeEEE
Q 018699           49 KYQI--KGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPA-FP-WEFYMYRQLDQRISGRERSSFGFAHRIHLYSDYSILV  124 (351)
Q Consensus        49 ~Y~i--~~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~-~~-~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv  124 (351)
                      -|+|  .+.||+|.||+||-|+ ++.+|+.||||++.+- +. .....++..-..+....|+.++.+.-.+...+..|+|
T Consensus       563 vYQif~devLGSGQFG~VYgg~-hRktGrdVAvKvIdKlrFp~kqesqlR~EVaILq~l~HPGiV~le~M~ET~ervFVV  641 (888)
T KOG4236|consen  563 VYQIFADEVLGSGQFGTVYGGK-HRKTGRDVAVKVIDKLRFPTKQESQLRNEVAILQNLHHPGIVNLECMFETPERVFVV  641 (888)
T ss_pred             HHHhhhHhhccCCcceeeecce-ecccCceeeeeeeecccCCCchHHHHHHHHHHHHhcCCCCeeEEEEeecCCceEEEE
Confidence            3555  5799999999999999 6899999999998753 11 1224555555667778899999999899999999999


Q ss_pred             EEecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeeccCCCCCcccC
Q 018699          125 CDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSGPWQDQ  204 (351)
Q Consensus       125 ~e~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~~~~~~~~~  204 (351)
                      ||.+.|.-|+-.+...   .+.+++.....++.||+.||+|||-++|+|+||||+||++...+              .-.
T Consensus       642 MEKl~GDMLEMILSsE---kgRL~er~TkFlvtQIL~ALr~LH~knIvHCDLKPENVLLas~~--------------~FP  704 (888)
T KOG4236|consen  642 MEKLHGDMLEMILSSE---KGRLPERITKFLVTQILVALRYLHFKNIVHCDLKPENVLLASAS--------------PFP  704 (888)
T ss_pred             ehhhcchHHHHHHHhh---cccchHHHHHHHHHHHHHHHHHhhhcceeeccCCchheeeccCC--------------CCC
Confidence            9999554455555554   57899999999999999999999999999999999999999653              456


Q ss_pred             CeEEeecCCccccccCCCCccccccccCCCcccceeccCCCCCccchHhHHHHHHHHHHhCccccccccCCC----CCce
Q 018699          205 GLCLVDWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQEKKPWKFQVDTYGLCAIVHMMLHNSYMEIEKKASP----DGGL  280 (351)
Q Consensus       205 ~~~l~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~p~~~~~~~~----~~~~  280 (351)
                      .+||||||+|+.+   ++.+...+.+|||.|+|||++..+.|+..-|+||.|||+|--+.|.+||.......    .+.+
T Consensus       705 QvKlCDFGfARiI---gEksFRrsVVGTPAYLaPEVLrnkGyNrSLDMWSVGVIiYVsLSGTFPFNEdEdIndQIQNAaF  781 (888)
T KOG4236|consen  705 QVKLCDFGFARII---GEKSFRRSVVGTPAYLAPEVLRNKGYNRSLDMWSVGVIIYVSLSGTFPFNEDEDINDQIQNAAF  781 (888)
T ss_pred             ceeeccccceeec---chhhhhhhhcCCccccCHHHHhhccccccccceeeeEEEEEEecccccCCCccchhHHhhcccc
Confidence            7999999999754   34555677889999999999999999999999999999999999999998765431    1222


Q ss_pred             eeecCcchhhhhHHHHHHHHHHHHhcCCCCCChHHHHHHHHHH
Q 018699          281 VYLPKLSFKRYWKVELWKSLFTNLLNMSSGNDKEVLQNLQKSF  323 (351)
Q Consensus       281 ~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~~~~  323 (351)
                      .+ ++.+..+ .+ +.+.+||..+|+....+|.+....|.|+|
T Consensus       782 My-Pp~PW~e-is-~~AidlIn~LLqVkm~kRysvdk~lsh~W  821 (888)
T KOG4236|consen  782 MY-PPNPWSE-IS-PEAIDLINNLLQVKMRKRYSVDKSLSHPW  821 (888)
T ss_pred             cc-CCCchhh-cC-HHHHHHHHHHHHHHHHHhcchHhhccchh
Confidence            22 2222221 12 78899999999999999999999999986

>cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase

Probab=100.00  E-value=2.6e-36  Score=267.02  Aligned_cols=255  Identities=14%  Similarity=0.087  Sum_probs=187.8

Q ss_pred             EEcCeeEEEEEEeeccCceEEEEEEecCC--CCceEEEEecCCCCCh-HHHHHHHHHhhhccccccccccceeeecccCe
Q 018699           44 EIGGKKYQIKGCAGQGGFAKVFKAYVNGD--PEDVVALKIQKPAFPW-EFYMYRQLDQRISGRERSSFGFAHRIHLYSDY  120 (351)
Q Consensus        44 ~i~~~~Y~i~~~lg~G~~g~V~~a~~~~~--~~~~vaiK~~~~~~~~-e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  120 (351)
                      ++..++|.+.+.||.|++|.||+|.+...  ....|+||........ ..+.+......+....|++++....+.. .+.
T Consensus         2 ~~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~-~~~   80 (270)
T cd05056           2 EIQREDITLGRCIGEGQFGDVYQGVYMSPENEKIAVAVKTCKNCTSPSVREKFLQEAYIMRQFDHPHIVKLIGVIT-ENP   80 (270)
T ss_pred             eechhhceeeeeeCCccceeEEEEEEecCCCCCcceEEEecCCcCCHHHHHHHHHHHHHHHhCCCCchhceeEEEc-CCC
Confidence            46678899999999999999999985322  2457899988765422 1222222223344456777777776654 355


Q ss_pred             eEEEEEecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeeccCCCCC
Q 018699          121 SILVCDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSGP  200 (351)
Q Consensus       121 ~~lv~e~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~~~~~  200 (351)
                      .++||||+++++|.+++...   ...+++..++.++.|++.|+.|||+.|++|+||+|+||+++                
T Consensus        81 ~~lv~e~~~~~~L~~~l~~~---~~~~~~~~~~~~~~~l~~~l~~lH~~~~~H~dl~p~nili~----------------  141 (270)
T cd05056          81 VWIVMELAPLGELRSYLQVN---KYSLDLASLILYSYQLSTALAYLESKRFVHRDIAARNVLVS----------------  141 (270)
T ss_pred             cEEEEEcCCCCcHHHHHHhC---CCCCCHHHHHHHHHHHHHHHHHHHhCCeeccccChheEEEe----------------
Confidence            68999999999999999764   34689999999999999999999999999999999999999                


Q ss_pred             cccCCeEEeecCCccccccCCCCccccccccCCCcccceeccCCCCCccchHhHHHHHHHHHHh-CccccccccCCCCC-
Q 018699          201 WQDQGLCLVDWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQEKKPWKFQVDTYGLCAIVHMMLH-NSYMEIEKKASPDG-  278 (351)
Q Consensus       201 ~~~~~~~l~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~-g~~p~~~~~~~~~~-  278 (351)
                       .++.++|+|||++...... .........++..|+|||.+.+..++.++||||||+++|++++ |..||......... 
T Consensus       142 -~~~~~~l~d~g~~~~~~~~-~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~pf~~~~~~~~~~  219 (270)
T cd05056         142 -SPDCVKLGDFGLSRYLEDE-SYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMLGVKPFQGVKNNDVIG  219 (270)
T ss_pred             -cCCCeEEccCceeeecccc-cceecCCCCccccccChhhhccCCCCchhhhHHHHHHHHHHHHcCCCCCCCCCHHHHHH
Confidence             6778999999988643211 0011112234467999999988888999999999999999986 99998654332110 


Q ss_pred             ceeeecCcchhhhhHHHHHHHHHHHHhcCCCCCChHHHHHHHH
Q 018699          279 GLVYLPKLSFKRYWKVELWKSLFTNLLNMSSGNDKEVLQNLQK  321 (351)
Q Consensus       279 ~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~~  321 (351)
                      ........+.+...+ ..+.++|.+||..+|++||++.+++..
T Consensus       220 ~~~~~~~~~~~~~~~-~~~~~li~~~l~~~P~~Rpt~~~~~~~  261 (270)
T cd05056         220 RIENGERLPMPPNCP-PTLYSLMTKCWAYDPSKRPRFTELKAQ  261 (270)
T ss_pred             HHHcCCcCCCCCCCC-HHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence            000111122233334 789999999999999999999997765

Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions

>cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2

Probab=100.00  E-value=1.9e-36  Score=271.53  Aligned_cols=258  Identities=12%  Similarity=0.072  Sum_probs=185.9

Q ss_pred             cCeeEEEEEEeeccCceEEEEEEec---------------CCCCceEEEEecCCCCChH-HHHHHHHHhhhccccccccc
Q 018699           46 GGKKYQIKGCAGQGGFAKVFKAYVN---------------GDPEDVVALKIQKPAFPWE-FYMYRQLDQRISGRERSSFG  109 (351)
Q Consensus        46 ~~~~Y~i~~~lg~G~~g~V~~a~~~---------------~~~~~~vaiK~~~~~~~~e-~~~~~~~~~~~~~~~~~~~~  109 (351)
                      ..++|++.+.||.|+||+||+|.+.               ..++..||+|++....... ...+......+....++++.
T Consensus         3 ~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~   82 (296)
T cd05095           3 PRKRLTFKEKLGEGQFGEVHLCEAEGMEKFMDKDFSLDVSGNQPVLVAVKMLREDANKNARNDFLKEIKIMSRLKDPNII   82 (296)
T ss_pred             ChhhceeeeeccCCCCCeEEecccccccccccccccccCCCCceeEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcc
Confidence            3568999999999999999998632               1234578999987543221 11111222233445677888


Q ss_pred             cceeeecccCeeEEEEEecCCCCHHHHHHHHHhh-------CCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEE
Q 018699          110 FAHRIHLYSDYSILVCDYLSQGTLQDAINSYVVI-------GKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLL  182 (351)
Q Consensus       110 ~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~~-------~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nil  182 (351)
                      ..+......+..++||||+++++|.+++......       ...+++.++..++.|++.|++|||+.|++|+||||+||+
T Consensus        83 ~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~H~dlkp~Nil  162 (296)
T cd05095          83 RLLAVCITSDPLCMITEYMENGDLNQFLSRHEPQEAAEKADVVTISYSTLIFMATQIASGMKYLSSLNFVHRDLATRNCL  162 (296)
T ss_pred             eEEEEEecCCccEEEEEeCCCCcHHHHHHhcCcccccccccccccCHHHHHHHHHHHHHHHHHHHHCCeecccCChheEE
Confidence            8888887788899999999999999998764211       124677889999999999999999999999999999999


Q ss_pred             EeecCCcceeeccCCCCCcccCCeEEeecCCccccccCCCCccccccccCCCcccceeccCCCCCccchHhHHHHHHHHH
Q 018699          183 IRYARDELTVLDHDRSGPWQDQGLCLVDWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQEKKPWKFQVDTYGLCAIVHMM  262 (351)
Q Consensus       183 l~~~~~~~~~~~~~~~~~~~~~~~~l~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~l  262 (351)
                      ++                 .++.++|+|||++................++..|++||...+..++.++|||||||++|+|
T Consensus       163 i~-----------------~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~DiwSlG~~l~el  225 (296)
T cd05095         163 VG-----------------KNYTIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMSWESILLGKFTTASDVWAFGVTLWEI  225 (296)
T ss_pred             Ec-----------------CCCCEEeccCcccccccCCcceeccCcCcCccccCCHHHHhcCCccchhhhhHHHHHHHHH
Confidence            98                 6778999999988643211111111122345679999998888899999999999999999


Q ss_pred             Hh--CccccccccCCCCC----ce----eeecCcchhhhhHHHHHHHHHHHHhcCCCCCChHHHHHHHH
Q 018699          263 LH--NSYMEIEKKASPDG----GL----VYLPKLSFKRYWKVELWKSLFTNLLNMSSGNDKEVLQNLQK  321 (351)
Q Consensus       263 ~~--g~~p~~~~~~~~~~----~~----~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~~  321 (351)
                      ++  |..||.........    ..    ......+.+..++ ..+.+|+.+||..||++||++.+++..
T Consensus       226 ~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~li~~cl~~~p~~Rp~~~~i~~~  293 (296)
T cd05095         226 LTLCKEQPYSQLSDEQVIENTGEFFRDQGRQVYLPKPALCP-DSLYKLMLSCWRRNAKERPSFQEIHAT  293 (296)
T ss_pred             HHhCCCCCccccChHHHHHHHHHHHhhccccccCCCCCCCC-HHHHHHHHHHcCCCcccCCCHHHHHHH
Confidence            98  67787643321100    00    0000111122233 788999999999999999999998764

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit

>cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants

Probab=100.00  E-value=2.2e-36  Score=276.05  Aligned_cols=253  Identities=20%  Similarity=0.264  Sum_probs=187.2

Q ss_pred             CeeEEEEEEeeccCceEEEEEEecCCCCceEEEEecCCCCCh---HHHHHHHHHhhhccccccccccceeeeccc-----
Q 018699           47 GKKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFPW---EFYMYRQLDQRISGRERSSFGFAHRIHLYS-----  118 (351)
Q Consensus        47 ~~~Y~i~~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~~~---e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----  118 (351)
                      +++|.+.+.||.|++|+||+|+ +..+++.||||.+......   ......++ .......|+++....++....     
T Consensus         4 ~~~y~~~~~lg~G~~~~vy~~~-~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~-~~l~~l~h~ni~~~~~~~~~~~~~~~   81 (337)
T cd07858           4 DTKYVPIKPIGRGAYGIVCSAK-NSETNEKVAIKKIANAFDNRIDAKRTLREI-KLLRHLDHENVIAIKDIMPPPHREAF   81 (337)
T ss_pred             ccceeEEEEeccCCCeEEEEEE-ecCCCCeEEEEEecccccccchhHHHHHHH-HHHHhcCCCCccchHHheeccccccc
Confidence            4689999999999999999999 5678899999998754222   11222222 223334566776666544322     


Q ss_pred             CeeEEEEEecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeeccCCC
Q 018699          119 DYSILVCDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRS  198 (351)
Q Consensus       119 ~~~~lv~e~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~~~  198 (351)
                      ...|+|+||+ +++|.+++..    +..+++..+..++.|++.|+.|||+++++|+||+|+||+++              
T Consensus        82 ~~~~lv~e~~-~~~L~~~~~~----~~~l~~~~~~~i~~qi~~aL~~LH~~~i~H~dlkp~Nil~~--------------  142 (337)
T cd07858          82 NDVYIVYELM-DTDLHQIIRS----SQTLSDDHCQYFLYQLLRGLKYIHSANVLHRDLKPSNLLLN--------------  142 (337)
T ss_pred             CcEEEEEeCC-CCCHHHHHhc----CCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEc--------------
Confidence            3579999999 5799988876    56899999999999999999999999999999999999999              


Q ss_pred             CCcccCCeEEeecCCccccccCCCCccccccccCCCcccceeccC-CCCCccchHhHHHHHHHHHHhCccccccccCCC-
Q 018699          199 GPWQDQGLCLVDWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQEK-KPWKFQVDTYGLCAIVHMMLHNSYMEIEKKASP-  276 (351)
Q Consensus       199 ~~~~~~~~~l~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~~DiwslG~il~~l~~g~~p~~~~~~~~-  276 (351)
                         .++.++|+|||++......  ........++..|+|||.+.+ ..++.++|||||||++|+|++|..||....... 
T Consensus       143 ---~~~~~kL~Dfg~~~~~~~~--~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~  217 (337)
T cd07858         143 ---ANCDLKICDFGLARTTSEK--GDFMTEYVVTRWYRAPELLLNCSEYTTAIDVWSVGCIFAELLGRKPLFPGKDYVHQ  217 (337)
T ss_pred             ---CCCCEEECcCccccccCCC--cccccccccccCccChHHHhcCCCCCCcccHHHHHHHHHHHHcCCCCCCCCChHHH
Confidence               6778999999988654321  122233457889999998764 457899999999999999999999985432100 


Q ss_pred             --------------CC------c-------eeeecCcchh---hhhHHHHHHHHHHHHhcCCCCCChHHHHHHHHHHHHH
Q 018699          277 --------------DG------G-------LVYLPKLSFK---RYWKVELWKSLFTNLLNMSSGNDKEVLQNLQKSFQDY  326 (351)
Q Consensus       277 --------------~~------~-------~~~~~~~~~~---~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~~~~~~~  326 (351)
                                    ..      .       ....+.....   ...+ +.+.+||.+||++||++||++.++++|+|...
T Consensus       218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~li~~~l~~~P~~Rps~~ell~h~~~~~  296 (337)
T cd07858         218 LKLITELLGSPSEEDLGFIRNEKARRYIRSLPYTPRQSFARLFPHAN-PLAIDLLEKMLVFDPSKRITVEEALAHPYLAS  296 (337)
T ss_pred             HHHHHHHhCCCChHHhhhcCchhhhHHHHhcCcccccCHHHHcccCC-HHHHHHHHHHhcCChhhccCHHHHHcCcchhh
Confidence                          00      0       0000001111   1123 77899999999999999999999999987543

Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati

>cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors

Probab=100.00  E-value=2.8e-36  Score=270.33  Aligned_cols=258  Identities=12%  Similarity=0.074  Sum_probs=187.4

Q ss_pred             cCeeEEEEEEeeccCceEEEEEEecCC---------------CCceEEEEecCCCCChH-HHHHHHHHhhhccccccccc
Q 018699           46 GGKKYQIKGCAGQGGFAKVFKAYVNGD---------------PEDVVALKIQKPAFPWE-FYMYRQLDQRISGRERSSFG  109 (351)
Q Consensus        46 ~~~~Y~i~~~lg~G~~g~V~~a~~~~~---------------~~~~vaiK~~~~~~~~e-~~~~~~~~~~~~~~~~~~~~  109 (351)
                      ..++|++.+.||+|+||.||+|.+...               .+..||+|.+....... ...+......+....++++.
T Consensus         3 ~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~   82 (296)
T cd05051           3 PRQPLNFVEKLGEGQFGEVHLCEADGLQDFSEKAFAENDNADAPVLVAVKVLRPDASDNAREDFLKEVKILSRLSDPNIA   82 (296)
T ss_pred             chhhCcccccccCCCCccEEEEEeccCCcccccccccccccCCceeEEEEEecCccCHHHHHHHHHHHHHHHhcCCCCEe
Confidence            346899999999999999999985321               23568999987654321 11122222333445677888


Q ss_pred             cceeeecccCeeEEEEEecCCCCHHHHHHHHHhh-------CCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEE
Q 018699          110 FAHRIHLYSDYSILVCDYLSQGTLQDAINSYVVI-------GKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLL  182 (351)
Q Consensus       110 ~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~~-------~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nil  182 (351)
                      .....+..++..+++||++++++|.+++......       ...+++..++.++.|++.||+|||++|++|+||+|+||+
T Consensus        83 ~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~LH~~~i~H~dlkp~Nil  162 (296)
T cd05051          83 RLLGVCTVDPPLCMIMEYMENGDLNQFLQKHVAETSGLACNSKSLSFSTLLYMATQIASGMRYLESLNFVHRDLATRNCL  162 (296)
T ss_pred             EEEEEEecCCCcEEEEecCCCCCHHHHHHhcccccccccccCCCCCHHHHHHHHHHHHHHHHHHHHcCccccccchhcee
Confidence            8887777778999999999999999999764210       126899999999999999999999999999999999999


Q ss_pred             EeecCCcceeeccCCCCCcccCCeEEeecCCccccccCCCCccccccccCCCcccceeccCCCCCccchHhHHHHHHHHH
Q 018699          183 IRYARDELTVLDHDRSGPWQDQGLCLVDWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQEKKPWKFQVDTYGLCAIVHMM  262 (351)
Q Consensus       183 l~~~~~~~~~~~~~~~~~~~~~~~~l~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~l  262 (351)
                      ++                 .++.++|+|||.+................++..|+|||.+.+..++.++|||||||++|+|
T Consensus       163 i~-----------------~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el  225 (296)
T cd05051         163 VG-----------------KNYTIKIADFGMSRNLYSSDYYRVQGRAPLPIRWMAWESVLLGKFTTKSDVWAFGVTLWEI  225 (296)
T ss_pred             ec-----------------CCCceEEccccceeecccCcceeecCcCCCCceecCHHHhhcCCCCccchhhhhHHHHHHH
Confidence            99                 6778999999988643211111112233456789999999888889999999999999999


Q ss_pred             Hh--CccccccccCCCC----Cce----eeecCcchhhhhHHHHHHHHHHHHhcCCCCCChHHHHHHHH
Q 018699          263 LH--NSYMEIEKKASPD----GGL----VYLPKLSFKRYWKVELWKSLFTNLLNMSSGNDKEVLQNLQK  321 (351)
Q Consensus       263 ~~--g~~p~~~~~~~~~----~~~----~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~~  321 (351)
                      ++  |..||........    ...    ........+...+ ..+.++|.+||..||++||++.+++..
T Consensus       226 ~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~l~~li~~cl~~~p~~Rpt~~el~~~  293 (296)
T cd05051         226 LTLCREQPYEHLTDQQVIENAGHFFRDDGRQIYLPRPPNCP-KDIYELMLECWRRDEEDRPTFREIHLF  293 (296)
T ss_pred             HhcCCCCCCCCcChHHHHHHHHhccccccccccCCCccCCC-HHHHHHHHHHhccChhcCCCHHHHHHH
Confidence            98  6677654322100    000    0001111122223 689999999999999999999999654

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke

>cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase

Probab=100.00  E-value=1.9e-36  Score=265.95  Aligned_cols=243  Identities=12%  Similarity=0.039  Sum_probs=178.9

Q ss_pred             EeeccCceEEEEEEe-cCCCCceEEEEecCCCCChHH--HHHHHHHhhhccccccccccceeeecccCeeEEEEEecCCC
Q 018699           55 CAGQGGFAKVFKAYV-NGDPEDVVALKIQKPAFPWEF--YMYRQLDQRISGRERSSFGFAHRIHLYSDYSILVCDYLSQG  131 (351)
Q Consensus        55 ~lg~G~~g~V~~a~~-~~~~~~~vaiK~~~~~~~~e~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~  131 (351)
                      +||+|+||.||+|.+ ...+++.+|+|++........  ..+...........++++........ .+..++||||++++
T Consensus         2 ~lg~G~~g~v~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-~~~~~lv~e~~~~~   80 (257)
T cd05116           2 ELGSGNFGTVKKGMYKMKKSEKTVAVKILKNDNNDPALKDELLREANVMQQLDNPYIVRMIGICE-AESWMLVMELAELG   80 (257)
T ss_pred             cCCCcCCcceEEeEEecCCCceEEEEEEccCCCCcHHHHHHHHHHHHHHHhCCCCCcceEEEEEc-CCCcEEEEecCCCC
Confidence            689999999999975 345678999999875543221  11111122334456777777766554 45678999999999


Q ss_pred             CHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeeccCCCCCcccCCeEEeec
Q 018699          132 TLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSGPWQDQGLCLVDW  211 (351)
Q Consensus       132 sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~~~~~~~~~~~~l~Df  211 (351)
                      +|.+++..    ...+++..+..++.|++.|+.+||++||+|+||+|+||+++                 .++.++|+||
T Consensus        81 ~L~~~l~~----~~~~~~~~~~~i~~qi~~al~~lH~~~i~H~dlkp~nill~-----------------~~~~~kl~Df  139 (257)
T cd05116          81 PLNKFLQK----NKHVTEKNITELVHQVSMGMKYLEETNFVHRDLAARNVLLV-----------------TQHYAKISDF  139 (257)
T ss_pred             cHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccchhhEEEc-----------------CCCeEEECCC
Confidence            99999976    46789999999999999999999999999999999999999                 6677999999


Q ss_pred             CCccccccCCCC-ccccccccCCCcccceeccCCCCCccchHhHHHHHHHHHHh-CccccccccCCCCCce-eeecCcch
Q 018699          212 GRGIDLHLFPDN-MEFEGDCRTSGFRCIEMQEKKPWKFQVDTYGLCAIVHMMLH-NSYMEIEKKASPDGGL-VYLPKLSF  288 (351)
Q Consensus       212 g~a~~~~~~~~~-~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~-g~~p~~~~~~~~~~~~-~~~~~~~~  288 (351)
                      |++......... .......++..|+|||.+.+..++.++|+|||||++|+|++ |..||........... ......+.
T Consensus       140 g~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~i~~~~~~~~  219 (257)
T cd05116         140 GLSKALGADENYYKAKTHGKWPVKWYAPECMNYYKFSSKSDVWSFGVLMWEAFSYGQKPYKGMKGNEVTQMIESGERMEC  219 (257)
T ss_pred             ccccccCCCCCeeeecCCCCCCccccCHhHhccCCcCchhHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHCCCCCCC
Confidence            988654321111 01112234578999999988888899999999999999998 9999875432110000 00111223


Q ss_pred             hhhhHHHHHHHHHHHHhcCCCCCChHHHHHHH
Q 018699          289 KRYWKVELWKSLFTNLLNMSSGNDKEVLQNLQ  320 (351)
Q Consensus       289 ~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~  320 (351)
                      +...+ ..+.++|.+||++||++||++.++..
T Consensus       220 ~~~~~-~~l~~li~~~~~~~p~~Rp~~~~i~~  250 (257)
T cd05116         220 PQRCP-PEMYDLMKLCWTYGVDERPGFAVVEL  250 (257)
T ss_pred             CCCCC-HHHHHHHHHHhccCchhCcCHHHHHH
Confidence            33344 78999999999999999999988754

Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio

>PLN00009 cyclin-dependent kinase A; Provisional

Probab=100.00  E-value=3.9e-36  Score=269.25  Aligned_cols=257  Identities=18%  Similarity=0.202  Sum_probs=188.1

Q ss_pred             eeEEEEEEeeccCceEEEEEEecCCCCceEEEEecCCCCChH--HHHHHHHHhhhccccccccccceeeecccCeeEEEE
Q 018699           48 KKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFPWE--FYMYRQLDQRISGRERSSFGFAHRIHLYSDYSILVC  125 (351)
Q Consensus        48 ~~Y~i~~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~~~e--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~  125 (351)
                      ++|++.+.||.|++|+||+|. +..+++.||+|.+......+  ...+...........|+++..........+..|+||
T Consensus         2 ~~y~~~~~l~~g~~~~v~~~~-~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~   80 (294)
T PLN00009          2 DQYEKVEKIGEGTYGVVYKAR-DRVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEKRLYLVF   80 (294)
T ss_pred             CceEEEEEecCCCCEEEEEEE-ecCCCcEEEEEehhhccccccchHHHHHHHHHHHhccCCCEeeEEEEEecCCeEEEEE
Confidence            479999999999999999999 56778999999986543221  111111223334456788888888888889999999


Q ss_pred             EecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeeccCCCCCcccCC
Q 018699          126 DYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSGPWQDQG  205 (351)
Q Consensus       126 e~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~~~~~~~~~~  205 (351)
                      ||+ +++|.+.+....  ...+++..++.++.||+.|+.|||++|++|+||+|+||+++.                .++.
T Consensus        81 e~~-~~~l~~~~~~~~--~~~~~~~~~~~~~~qi~~aL~~LH~~~i~H~dl~p~nill~~----------------~~~~  141 (294)
T PLN00009         81 EYL-DLDLKKHMDSSP--DFAKNPRLIKTYLYQILRGIAYCHSHRVLHRDLKPQNLLIDR----------------RTNA  141 (294)
T ss_pred             ecc-cccHHHHHHhCC--CCCcCHHHHHHHHHHHHHHHHHHHhCCeeCCCCCcceEEEEC----------------CCCE
Confidence            999 568888876532  234688889999999999999999999999999999999983                2345


Q ss_pred             eEEeecCCccccccCCCCccccccccCCCcccceeccC-CCCCccchHhHHHHHHHHHHhCccccccccCCCC-------
Q 018699          206 LCLVDWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQEK-KPWKFQVDTYGLCAIVHMMLHNSYMEIEKKASPD-------  277 (351)
Q Consensus       206 ~~l~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~~DiwslG~il~~l~~g~~p~~~~~~~~~-------  277 (351)
                      ++|+|||++.....  .........+++.|+|||.+.+ ..++.++||||+||++|+|++|.+||........       
T Consensus       142 ~kl~dfg~~~~~~~--~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~i~~~l~tg~~pf~~~~~~~~~~~~~~~  219 (294)
T PLN00009        142 LKLADFGLARAFGI--PVRTFTHEVVTLWYRAPEILLGSRHYSTPVDIWSVGCIFAEMVNQKPLFPGDSEIDELFKIFRI  219 (294)
T ss_pred             EEEcccccccccCC--CccccccCceeecccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHH
Confidence            89999998854321  1112233456789999998865 4578999999999999999999999864322100       


Q ss_pred             ------Cc-----------eeee--cCcch---hhhhHHHHHHHHHHHHhcCCCCCChHHHHHHHHHHHHHH
Q 018699          278 ------GG-----------LVYL--PKLSF---KRYWKVELWKSLFTNLLNMSSGNDKEVLQNLQKSFQDYL  327 (351)
Q Consensus       278 ------~~-----------~~~~--~~~~~---~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~~~~~~~~  327 (351)
                            ..           ....  .....   ....+ +.+.++|.+||+.+|++||++.+++.|+|..-.
T Consensus       220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~i~~~l~~~P~~Rps~~~~l~~~~~~~~  290 (294)
T PLN00009        220 LGTPNEETWPGVTSLPDYKSAFPKWPPKDLATVVPTLE-PAGVDLLSKMLRLDPSKRITARAALEHEYFKDL  290 (294)
T ss_pred             hCCCChhhccccccchhhhhhcccCCCCCHHHhCcCCC-hHHHHHHHHHccCChhhCcCHHHHhcCchHhHH
Confidence                  00           0000  00000   01122 678999999999999999999999999875543

>cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

Probab=100.00  E-value=3.6e-37  Score=270.72  Aligned_cols=247  Identities=15%  Similarity=0.129  Sum_probs=179.7

Q ss_pred             EEeeccCceEEEEEEecCCC-------CceEEEEecCCCCChHHHHHHHHHhhhccccccccccceeeecccCeeEEEEE
Q 018699           54 GCAGQGGFAKVFKAYVNGDP-------EDVVALKIQKPAFPWEFYMYRQLDQRISGRERSSFGFAHRIHLYSDYSILVCD  126 (351)
Q Consensus        54 ~~lg~G~~g~V~~a~~~~~~-------~~~vaiK~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e  126 (351)
                      +.||+|+||.||+|.+ ...       ...+++|..........+.............|++++.....+..++..++|||
T Consensus         1 ~~lg~G~~~~Vy~~~~-~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~~~~~lv~e   79 (258)
T cd05078           1 ESLGQGTFTKIFKGIR-REVGDYGELHKTEVLLKVLDKSHRNYSESFFEAASMMSQLSHKHLVLNYGVCVCGDESIMVQE   79 (258)
T ss_pred             CCCCcccchhheeeee-cccccccccccchhhHHhhcchhHHHHHHHHHHHHHHHhCCCCChhheeeEEEeCCCcEEEEe
Confidence            3689999999999985 332       33488888765433333333333334445668888888888877888999999


Q ss_pred             ecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeeccCCCCCcccCCe
Q 018699          127 YLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSGPWQDQGL  206 (351)
Q Consensus       127 ~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~~~~~~~~~~~  206 (351)
                      |+.+++|.+++...   +..+++..+..++.||+.|++|||++||+|+||||+||+++.++...         ....+.+
T Consensus        80 ~~~~g~L~~~l~~~---~~~~~~~~~~~~~~qi~~~l~~lH~~~iiH~dlkp~nili~~~~~~~---------~~~~~~~  147 (258)
T cd05078          80 YVKFGSLDTYLKKN---KNLINISWKLEVAKQLAWALHFLEDKGLTHGNVCAKNVLLIREEDRK---------TGNPPFI  147 (258)
T ss_pred             cCCCCcHHHHHhcC---CCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCccceEEEecccccc---------cCCCceE
Confidence            99999999999764   34688999999999999999999999999999999999998543210         0022347


Q ss_pred             EEeecCCccccccCCCCccccccccCCCcccceeccC-CCCCccchHhHHHHHHHHHHhCc-cccccccCCCCCceeeec
Q 018699          207 CLVDWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQEK-KPWKFQVDTYGLCAIVHMMLHNS-YMEIEKKASPDGGLVYLP  284 (351)
Q Consensus       207 ~l~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~~DiwslG~il~~l~~g~-~p~~~~~~~~~~~~~~~~  284 (351)
                      +++|||.+....      ......++..|+|||.+.+ ..++.++|||||||++|+|++|. .|+.......... ....
T Consensus       148 ~l~d~g~~~~~~------~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~~~~~~~~~~~~~~-~~~~  220 (258)
T cd05078         148 KLSDPGISITVL------PKEILLERIPWVPPECIENPQNLSLAADKWSFGTTLWEIFSGGDKPLSALDSQKKLQ-FYED  220 (258)
T ss_pred             EecccccccccC------CchhccccCCccCchhccCCCCCCchhhHHHHHHHHHHHHcCCCCChhhccHHHHHH-HHHc
Confidence            999999875422      1122456888999999976 45789999999999999999995 5554332211100 0111


Q ss_pred             CcchhhhhHHHHHHHHHHHHhcCCCCCChHHHHHHHH
Q 018699          285 KLSFKRYWKVELWKSLFTNLLNMSSGNDKEVLQNLQK  321 (351)
Q Consensus       285 ~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~~  321 (351)
                      ...++.... ..+.+||.+||+.||++||++.++++.
T Consensus       221 ~~~~~~~~~-~~~~~li~~~l~~~p~~Rps~~~il~~  256 (258)
T cd05078         221 RHQLPAPKW-TELANLINQCMDYEPDFRPSFRAIIRD  256 (258)
T ss_pred             cccCCCCCc-HHHHHHHHHHhccChhhCCCHHHHHHh
Confidence            222332222 678999999999999999999999874

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity

>cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4

Probab=100.00  E-value=2e-36  Score=270.30  Aligned_cols=261  Identities=15%  Similarity=0.148  Sum_probs=188.8

Q ss_pred             eeEEEEEEeeccCceEEEEEEecCCCCceEEEEecCCCCCh--HHHHHHHHHhhhccccccccccceeeecccCeeEEEE
Q 018699           48 KKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFPW--EFYMYRQLDQRISGRERSSFGFAHRIHLYSDYSILVC  125 (351)
Q Consensus        48 ~~Y~i~~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~~~--e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~  125 (351)
                      ++|+..+.||+|+||.||++. +..+++.||+|.+......  ......++........+++++........++..+++|
T Consensus         4 ~~~~~~~~lg~G~~g~vy~~~-~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~~~~~~~~~~~~~~~~   82 (288)
T cd06616           4 EDLKDLGEIGRGAFGTVNKML-HKPSGTIMAVKRIRSTVDEKEQKRLLMDLDVVMRSSDCPYIVKFYGALFREGDCWICM   82 (288)
T ss_pred             HHhHHHHHhCCCCceEEEEEE-ECCCCCEEEEEEehhccChHHHHHHHHHHHHHHHhcCCCCEeeeeeEEecCCcEEEEE
Confidence            457778899999999999999 5677899999998754322  1222223222222223677877777777778889999


Q ss_pred             EecCCCCHHHHHHHHH-hhCCChhHHHHHHHHHHHHHHHHHHHHC-CceecCCCCCcEEEeecCCcceeeccCCCCCccc
Q 018699          126 DYLSQGTLQDAINSYV-VIGKSMEEVLCIYYTIEMLCILESLHDV-GIIHGDFKPDNLLIRYARDELTVLDHDRSGPWQD  203 (351)
Q Consensus       126 e~~~~~sL~~~l~~~~-~~~~~l~~~~~~~i~~qi~~~l~~LH~~-~i~H~dl~p~Nill~~~~~~~~~~~~~~~~~~~~  203 (351)
                      ||+ ++++.++..... ..+..+++..+..++.|++.|++|||+. +++||||+|+||+++                 .+
T Consensus        83 e~~-~~~l~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~i~H~dlkp~Nil~~-----------------~~  144 (288)
T cd06616          83 ELM-DISLDKFYKYVYEVLKSVIPEEILGKIAVATVKALNYLKEELKIIHRDVKPSNILLD-----------------RN  144 (288)
T ss_pred             ecc-cCCHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhcCCeeccCCCHHHEEEc-----------------cC
Confidence            998 557766543211 1136789999999999999999999975 999999999999999                 67


Q ss_pred             CCeEEeecCCccccccCCCCccccccccCCCcccceeccCC---CCCccchHhHHHHHHHHHHhCccccccccCCCC--C
Q 018699          204 QGLCLVDWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQEKK---PWKFQVDTYGLCAIVHMMLHNSYMEIEKKASPD--G  278 (351)
Q Consensus       204 ~~~~l~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~---~~~~~~DiwslG~il~~l~~g~~p~~~~~~~~~--~  278 (351)
                      +.++|+|||++.....   ........++..|+|||.+.+.   .++.++||||+||++|+|++|..||........  .
T Consensus       145 ~~~kl~dfg~~~~~~~---~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~  221 (288)
T cd06616         145 GNIKLCDFGISGQLVD---SIAKTRDAGCRPYMAPERIDPSARDGYDVRSDVWSLGITLYEVATGKFPYPKWNSVFDQLT  221 (288)
T ss_pred             CcEEEeecchhHHhcc---CCccccccCccCccCHHHhccccccCCcchhhhhHHHHHHHHHHhCCCCchhcchHHHHHh
Confidence            7899999998864321   1112233578899999998765   678999999999999999999999865431100  0


Q ss_pred             ceeeecCc----chhhhhHHHHHHHHHHHHhcCCCCCChHHHHHHHHHHHH-HHhhCh
Q 018699          279 GLVYLPKL----SFKRYWKVELWKSLFTNLLNMSSGNDKEVLQNLQKSFQD-YLCSNP  331 (351)
Q Consensus       279 ~~~~~~~~----~~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~~~~~~-~~~~~~  331 (351)
                      .......+    ..+...+ ..+.+||.+||++||++||++.+++.|+|.. +...+.
T Consensus       222 ~~~~~~~~~~~~~~~~~~~-~~l~~li~~~l~~~p~~Rpt~~~i~~~~~~~~~~~~~~  278 (288)
T cd06616         222 QVVKGDPPILSNSEEREFS-PSFVNFINLCLIKDESKRPKYKELLEHPFIKDYEERNV  278 (288)
T ss_pred             hhcCCCCCcCCCcCCCccC-HHHHHHHHHHccCChhhCcCHHHHhcChhhhchhhcch
Confidence            00000011    1111233 7889999999999999999999999998754 333333

Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates

>cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2

Probab=100.00  E-value=2e-36  Score=267.40  Aligned_cols=256  Identities=12%  Similarity=0.111  Sum_probs=188.9

Q ss_pred             EcCeeEEEEEEeeccCceEEEEEEecCCC--CceEEEEecCCCCChH-HHHHHHHHhhhccccccccccceeeecccCee
Q 018699           45 IGGKKYQIKGCAGQGGFAKVFKAYVNGDP--EDVVALKIQKPAFPWE-FYMYRQLDQRISGRERSSFGFAHRIHLYSDYS  121 (351)
Q Consensus        45 i~~~~Y~i~~~lg~G~~g~V~~a~~~~~~--~~~vaiK~~~~~~~~e-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  121 (351)
                      |..++|+..+.||+|++|.||+|.+....  ...+|+|.+....... ...+...........++++..........+..
T Consensus         2 i~~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~   81 (268)
T cd05063           2 IHPSHITKQKVIGAGEFGEVFRGILKMPGRKEVAVAIKTLKPGYTEKQRQDFLSEASIMGQFSHHNIIRLEGVVTKFKPA   81 (268)
T ss_pred             CChHHceEeeEecCCCCccEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHhcCCCCCeeEEEEEEccCCCc
Confidence            44568999999999999999999953222  2379999987653321 12222222334455677888888888778889


Q ss_pred             EEEEEecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeeccCCCCCc
Q 018699          122 ILVCDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSGPW  201 (351)
Q Consensus       122 ~lv~e~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~~~~~~  201 (351)
                      ++||||+++++|.+++...   ...+++..+..++.|++.|+.|||+.|++|+||+|+||+++                 
T Consensus        82 ~lv~e~~~~~~L~~~~~~~---~~~~~~~~~~~~~~~l~~al~~lH~~~i~H~dlkp~Nili~-----------------  141 (268)
T cd05063          82 MIITEYMENGALDKYLRDH---DGEFSSYQLVGMLRGIAAGMKYLSDMNYVHRDLAARNILVN-----------------  141 (268)
T ss_pred             EEEEEcCCCCCHHHHHHhc---CCCCCHHHHHHHHHHHHHHHHHHHHCCeeccccchhhEEEc-----------------
Confidence            9999999999999998763   35789999999999999999999999999999999999998                 


Q ss_pred             ccCCeEEeecCCccccccCCCCccc-cccccCCCcccceeccCCCCCccchHhHHHHHHHHHHh-CccccccccCCCCCc
Q 018699          202 QDQGLCLVDWGRGIDLHLFPDNMEF-EGDCRTSGFRCIEMQEKKPWKFQVDTYGLCAIVHMMLH-NSYMEIEKKASPDGG  279 (351)
Q Consensus       202 ~~~~~~l~Dfg~a~~~~~~~~~~~~-~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~-g~~p~~~~~~~~~~~  279 (351)
                      .++.++|+|||++............ .....+..|+|||.+.+..++.++|||||||++|++++ |..||..........
T Consensus       142 ~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~il~ell~~g~~p~~~~~~~~~~~  221 (268)
T cd05063         142 SNLECKVSDFGLSRVLEDDPEGTYTTSGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSFGERPYWDMSNHEVMK  221 (268)
T ss_pred             CCCcEEECCCccceecccccccceeccCCCcCceecCHHHhhcCCcChHhHHHHHHHHHHHHHhCCCCCCCcCCHHHHHH
Confidence            6777999999988654322111111 11122456999999988888999999999999999997 999986543221000


Q ss_pred             ee-eecCcchhhhhHHHHHHHHHHHHhcCCCCCChHHHHHHHH
Q 018699          280 LV-YLPKLSFKRYWKVELWKSLFTNLLNMSSGNDKEVLQNLQK  321 (351)
Q Consensus       280 ~~-~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~~  321 (351)
                      .. .....+.+.... ..+.+++.+||..+|++||++.+++..
T Consensus       222 ~i~~~~~~~~~~~~~-~~~~~li~~c~~~~p~~Rp~~~~i~~~  263 (268)
T cd05063         222 AINDGFRLPAPMDCP-SAVYQLMLQCWQQDRARRPRFVDIVNL  263 (268)
T ss_pred             HHhcCCCCCCCCCCC-HHHHHHHHHHcCCCcccCcCHHHHHHH
Confidence            00 001111122223 678999999999999999999999864

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored

>cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1

Probab=100.00  E-value=1e-36  Score=272.87  Aligned_cols=250  Identities=17%  Similarity=0.201  Sum_probs=187.5

Q ss_pred             eeEEEEEEeeccCceEEEEEEecCCCCceEEEEecCCCCChHH---HHHHHHHhhhccccccccccceeeeccc--CeeE
Q 018699           48 KKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFPWEF---YMYRQLDQRISGRERSSFGFAHRIHLYS--DYSI  122 (351)
Q Consensus        48 ~~Y~i~~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~~~e~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~  122 (351)
                      ++|++.+.||.|++|.||+|. +..+++.+++|.+......+.   ...+++ .......|+++..........  +..|
T Consensus         5 ~~y~~~~~lg~g~~~~v~~~~-~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~-~~l~~l~h~ni~~~~~~~~~~~~~~~~   82 (293)
T cd07843           5 DEYEKLNRIEEGTYGVVYRAR-DKKTGEIVALKKLKMEKEKEGFPITSLREI-NILLKLQHPNIVTVKEVVVGSNLDKIY   82 (293)
T ss_pred             hhhhhhhhhcCCCCeEEEEEE-ECCCCcEEEEEEEeeccccccchhhHHHHH-HHHHhcCCCCEEEEEEEEEecCCCcEE
Confidence            579999999999999999999 467789999999865432211   112222 223344577877777666555  8899


Q ss_pred             EEEEecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeeccCCCCCcc
Q 018699          123 LVCDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSGPWQ  202 (351)
Q Consensus       123 lv~e~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~~~~~~~  202 (351)
                      +|+||+. ++|.+++...   ...+++..++.++.|++.||+|||++|++|+||+|+||+++                 .
T Consensus        83 lv~e~~~-~~L~~~~~~~---~~~l~~~~~~~i~~qi~~aL~~LH~~~i~H~dl~p~nili~-----------------~  141 (293)
T cd07843          83 MVMEYVE-HDLKSLMETM---KQPFLQSEVKCLMLQLLSGVAHLHDNWILHRDLKTSNLLLN-----------------N  141 (293)
T ss_pred             EEehhcC-cCHHHHHHhc---cCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCCHHHEEEC-----------------C
Confidence            9999995 5999988764   34689999999999999999999999999999999999999                 6


Q ss_pred             cCCeEEeecCCccccccCCCCccccccccCCCcccceeccCC-CCCccchHhHHHHHHHHHHhCccccccccCCCC----
Q 018699          203 DQGLCLVDWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQEKK-PWKFQVDTYGLCAIVHMMLHNSYMEIEKKASPD----  277 (351)
Q Consensus       203 ~~~~~l~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~-~~~~~~DiwslG~il~~l~~g~~p~~~~~~~~~----  277 (351)
                      ++.++|+|||.+......  ........+++.|+|||.+.+. .++.++|+||+|+++|+|++|.+||........    
T Consensus       142 ~~~~~l~d~g~~~~~~~~--~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~f~~~~~~~~~~~~  219 (293)
T cd07843         142 RGILKICDFGLAREYGSP--LKPYTQLVVTLWYRAPELLLGAKEYSTAIDMWSVGCIFAELLTKKPLFPGKSEIDQLNKI  219 (293)
T ss_pred             CCcEEEeecCceeeccCC--ccccccccccccccCchhhcCCccccchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHH
Confidence            778999999988654321  1222334568889999998654 468899999999999999999998864321100    


Q ss_pred             -----------------------Cceeee----cCcchhhh-hHHHHHHHHHHHHhcCCCCCChHHHHHHHHHH
Q 018699          278 -----------------------GGLVYL----PKLSFKRY-WKVELWKSLFTNLLNMSSGNDKEVLQNLQKSF  323 (351)
Q Consensus       278 -----------------------~~~~~~----~~~~~~~~-~~~~~~~~li~~~L~~dP~~R~s~~e~l~~~~  323 (351)
                                             ......    ....++.. ++ +.+.++|.+||+.||++||++.|++.|+|
T Consensus       220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~li~~~l~~~p~~R~t~~ell~~~~  292 (293)
T cd07843         220 FKLLGTPTEKIWPGFSELPGAKKKTFTKYPYNQLRKKFPALSLS-DNGFDLLNRLLTYDPAKRISAEDALKHPY  292 (293)
T ss_pred             HHHhCCCchHHHHHhhccchhcccccccccchhhhccccccCCC-hHHHHHHHHHhccCccccCCHHHHhcCCC
Confidence                                   000000    01112221 23 77899999999999999999999999875

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the

>cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3

Probab=100.00  E-value=2.2e-36  Score=275.72  Aligned_cols=263  Identities=12%  Similarity=0.092  Sum_probs=191.2

Q ss_pred             eEEEEcCeeEEEEEEeeccCceEEEEEEecC------CCCceEEEEecCCCCChH-H-HHHHHHHhhhccc-cccccccc
Q 018699           41 KTIEIGGKKYQIKGCAGQGGFAKVFKAYVNG------DPEDVVALKIQKPAFPWE-F-YMYRQLDQRISGR-ERSSFGFA  111 (351)
Q Consensus        41 ~~~~i~~~~Y~i~~~lg~G~~g~V~~a~~~~------~~~~~vaiK~~~~~~~~e-~-~~~~~~~~~~~~~-~~~~~~~~  111 (351)
                      ..+++...+|++.+.||+|+||.||+|.+..      ..+..||+|++......+ . ....++. ..... .++++...
T Consensus         5 ~~~~~~~~~~~i~~~ig~G~~g~v~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~-~l~~l~~h~~iv~~   83 (334)
T cd05100           5 PKWELSRTRLTLGKPLGEGCFGQVVMAEAIGIDKDKPNKPVTVAVKMLKDDATDKDLSDLVSEME-MMKMIGKHKNIINL   83 (334)
T ss_pred             cccccCHhHeeecceeccccCCcEEEEEEeccCCccCCcceeEEEEEcccccCHHHHHHHHHHHH-HHHhhcCCCCeeee
Confidence            5677888899999999999999999998521      123468999887543222 1 2222222 22233 57788888


Q ss_pred             eeeecccCeeEEEEEecCCCCHHHHHHHHHh------------hCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCC
Q 018699          112 HRIHLYSDYSILVCDYLSQGTLQDAINSYVV------------IGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPD  179 (351)
Q Consensus       112 ~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~------------~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~  179 (351)
                      ...+...+..++++||+++++|.+++.....            ....++...+..++.|++.|+.|||++|++|+||+|+
T Consensus        84 ~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~givH~dlkp~  163 (334)
T cd05100          84 LGACTQDGPLYVLVEYASKGNLREYLRARRPPGMDYSFDTCKLPEEQLTFKDLVSCAYQVARGMEYLASQKCIHRDLAAR  163 (334)
T ss_pred             eEEEccCCceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHCCeeccccccc
Confidence            8888778889999999999999999976321            0124777888999999999999999999999999999


Q ss_pred             cEEEeecCCcceeeccCCCCCcccCCeEEeecCCccccccCCCCccccccccCCCcccceeccCCCCCccchHhHHHHHH
Q 018699          180 NLLIRYARDELTVLDHDRSGPWQDQGLCLVDWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQEKKPWKFQVDTYGLCAIV  259 (351)
Q Consensus       180 Nill~~~~~~~~~~~~~~~~~~~~~~~~l~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il  259 (351)
                      ||+++                 .++.++|+|||.+................++..|+|||.+.+..++.++|||||||++
T Consensus       164 Nill~-----------------~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il  226 (334)
T cd05100         164 NVLVT-----------------EDNVMKIADFGLARDVHNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLL  226 (334)
T ss_pred             eEEEc-----------------CCCcEEECCcccceecccccccccccCCCcCceEcCHHHhccCCcCchhhhHHHHHHH
Confidence            99998                 6677999999988643321111111222335679999999888899999999999999


Q ss_pred             HHHHh-CccccccccCCCCCcee-eecCcchhhhhHHHHHHHHHHHHhcCCCCCChHHHHHHHHH
Q 018699          260 HMMLH-NSYMEIEKKASPDGGLV-YLPKLSFKRYWKVELWKSLFTNLLNMSSGNDKEVLQNLQKS  322 (351)
Q Consensus       260 ~~l~~-g~~p~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~~~  322 (351)
                      |+|++ |..||............ .......+...+ ..+.++|.+||+.+|++||++.+++.+.
T Consensus       227 ~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~-~~l~~li~~cl~~~p~~Rps~~ell~~l  290 (334)
T cd05100         227 WEIFTLGGSPYPGIPVEELFKLLKEGHRMDKPANCT-HELYMIMRECWHAVPSQRPTFKQLVEDL  290 (334)
T ss_pred             HHHHhcCCCCCCCCCHHHHHHHHHcCCCCCCCCCCC-HHHHHHHHHHcccChhhCcCHHHHHHHH
Confidence            99998 78887543221100000 011112222233 6788999999999999999999998763

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases

Probab=100.00  E-value=6.1e-36  Score=266.74  Aligned_cols=249  Identities=18%  Similarity=0.213  Sum_probs=186.5

Q ss_pred             EEEEEEeeccCceEEEEEEecCCCCceEEEEecCCCCChH---HHHHHH--HHhhhccccccccccceeeecccCe----
Q 018699           50 YQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFPWE---FYMYRQ--LDQRISGRERSSFGFAHRIHLYSDY----  120 (351)
Q Consensus        50 Y~i~~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~~~e---~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~----  120 (351)
                      |++.+.||+|++|.||+|++ ..+++.||+|.+......+   .....+  +...+....++++..........+.    
T Consensus         1 y~~~~~l~~g~~~~v~~~~~-~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~~~~~   79 (287)
T cd07838           1 YEELAEIGEGAYGTVYKARD-LNTGRFVALKKVRVPLSEEGIPLSTLREIALLKQLESFEHPNIVRLLDVCHGPRTDREL   79 (287)
T ss_pred             CeEEEEecccCceEEEEEEE-CCCCCEEEEEEeccccccchhhhhHHHHHHHHHHhhccCCCCcceEEEEEeeccCCCCc
Confidence            78899999999999999994 5678999999987443221   111111  2233344457788887777765555    


Q ss_pred             -eEEEEEecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeeccCCCC
Q 018699          121 -SILVCDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSG  199 (351)
Q Consensus       121 -~~lv~e~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~~~~  199 (351)
                       .+++|||+. ++|.+++....  ...+++..++.++.|++.|+.+||+.+++|+||+|+||+++               
T Consensus        80 ~~~l~~e~~~-~~l~~~l~~~~--~~~l~~~~~~~~~~~i~~al~~LH~~~i~h~~l~~~nili~---------------  141 (287)
T cd07838          80 KLTLVFEHVD-QDLATYLSKCP--KPGLPPETIKDLMRQLLRGVDFLHSHRIVHRDLKPQNILVT---------------  141 (287)
T ss_pred             eeEEEehhcc-cCHHHHHHHcc--CCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCChhhEEEc---------------
Confidence             899999995 58998887642  23589999999999999999999999999999999999999               


Q ss_pred             CcccCCeEEeecCCccccccCCCCccccccccCCCcccceeccCCCCCccchHhHHHHHHHHHHhCccccccccCCCC--
Q 018699          200 PWQDQGLCLVDWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQEKKPWKFQVDTYGLCAIVHMMLHNSYMEIEKKASPD--  277 (351)
Q Consensus       200 ~~~~~~~~l~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~p~~~~~~~~~--  277 (351)
                        .++.++|+|||.+.....   ........++..|+|||.+.+..++.++|+||+||++|+|++|.+||........  
T Consensus       142 --~~~~~~l~dfg~~~~~~~---~~~~~~~~~~~~~~~PE~~~~~~~~~~~Di~s~G~~l~~l~~~~~~~~~~~~~~~~~  216 (287)
T cd07838         142 --SDGQVKIADFGLARIYSF---EMALTSVVVTLWYRAPEVLLQSSYATPVDMWSVGCIFAELFRRRPLFRGTSEADQLD  216 (287)
T ss_pred             --cCCCEEEeccCcceeccC---CcccccccccccccChHHhccCCCCCcchhhhHHHHHHHHHhCCCcccCCChHHHHH
Confidence              678899999998865321   1222333468889999999888889999999999999999999998865432100  


Q ss_pred             ---------C-------------ceeeecCcchhh---hhHHHHHHHHHHHHhcCCCCCChHHHHHHHHHH
Q 018699          278 ---------G-------------GLVYLPKLSFKR---YWKVELWKSLFTNLLNMSSGNDKEVLQNLQKSF  323 (351)
Q Consensus       278 ---------~-------------~~~~~~~~~~~~---~~~~~~~~~li~~~L~~dP~~R~s~~e~l~~~~  323 (351)
                               .             .+..........   ..+ ..+.++|.+||+.||.+||++.+++.|+|
T Consensus       217 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~li~~~l~~dp~~Rp~~~~il~~~~  286 (287)
T cd07838         217 KIFDVIGLPSEEEWPRNVSLPRSSFPSYTPRSFKSFVPEIC-EEGLDLLKKMLTFNPHKRISAFEALQHPY  286 (287)
T ss_pred             HHHHHcCCCChHhcCCCcccchhhcccccccchhhhhhhhh-HHHHHHHHHHhccCCccCCCHHHHhcCcC
Confidence                     0             000000011111   112 67889999999999999999999999976

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both

>cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6

Probab=100.00  E-value=1.6e-36  Score=277.46  Aligned_cols=255  Identities=15%  Similarity=0.141  Sum_probs=182.4

Q ss_pred             CeeEEEEEEeeccCceEEEEEEecCCCCceEEEEecCCCCChHHHHHHHHHhhhccccccccccceeeecc---------
Q 018699           47 GKKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFPWEFYMYRQLDQRISGRERSSFGFAHRIHLY---------  117 (351)
Q Consensus        47 ~~~Y~i~~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------  117 (351)
                      +++|++.+.||.|++|+||+|. +..+++.||+|.+......................++++.........         
T Consensus         4 ~~~y~~~~~Lg~g~~g~vy~~~-~~~~~~~v~iK~i~~~~~~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~~   82 (342)
T cd07854           4 GSRYMDLRPLGCGSNGLVFSAV-DSDCDKRVAVKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVYEVLGPSGSDLTEDV   82 (342)
T ss_pred             CcceEEEEEecCCCCEEEEEEE-ECCCCcEEEEEEEecCCCchHHHHHHHHHHHHhcCCCcchhhHhhhccccccccccc
Confidence            5799999999999999999999 577889999998765433222222111222333455666555443322         


Q ss_pred             -----cCeeEEEEEecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCccee
Q 018699          118 -----SDYSILVCDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTV  192 (351)
Q Consensus       118 -----~~~~~lv~e~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~  192 (351)
                           ....|+||||+. ++|.+.+..     ..+++..++.++.||+.|+.|||+.|++|+||+|+||+++.       
T Consensus        83 ~~~~~~~~~~lv~e~~~-~~L~~~~~~-----~~l~~~~~~~~~~qi~~aL~~LH~~givH~dikp~Nili~~-------  149 (342)
T cd07854          83 GSLTELNSVYIVQEYME-TDLANVLEQ-----GPLSEEHARLFMYQLLRGLKYIHSANVLHRDLKPANVFINT-------  149 (342)
T ss_pred             ccccccceEEEEeeccc-ccHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEEcC-------
Confidence                 235789999995 688888754     46889999999999999999999999999999999999973       


Q ss_pred             eccCCCCCcccCCeEEeecCCccccccCCCCc-cccccccCCCcccceeccC-CCCCccchHhHHHHHHHHHHhCccccc
Q 018699          193 LDHDRSGPWQDQGLCLVDWGRGIDLHLFPDNM-EFEGDCRTSGFRCIEMQEK-KPWKFQVDTYGLCAIVHMMLHNSYMEI  270 (351)
Q Consensus       193 ~~~~~~~~~~~~~~~l~Dfg~a~~~~~~~~~~-~~~~~~g~~~y~aPE~~~~-~~~~~~~DiwslG~il~~l~~g~~p~~  270 (351)
                               .++.++|+|||.+.......... ......++..|+|||.+.+ ..++.++|||||||++|+|++|..||.
T Consensus       150 ---------~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwSlGvil~el~~g~~pf~  220 (342)
T cd07854         150 ---------EDLVLKIGDFGLARIVDPHYSHKGYLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKPLFA  220 (342)
T ss_pred             ---------CCceEEECCcccceecCCccccccccccccccccccCHHHHhCccccCchhhHHHHHHHHHHHHhCCCCCC
Confidence                     33458999999886532211111 1122357888999998754 567889999999999999999999996


Q ss_pred             cccCCCCCc---------------------------eeeecCcchh---hhhHHHHHHHHHHHHhcCCCCCChHHHHHHH
Q 018699          271 EKKASPDGG---------------------------LVYLPKLSFK---RYWKVELWKSLFTNLLNMSSGNDKEVLQNLQ  320 (351)
Q Consensus       271 ~~~~~~~~~---------------------------~~~~~~~~~~---~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~  320 (351)
                      .........                           .......+..   ...+ ..+.+||.+||++||.+||++.+++.
T Consensus       221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~li~~~L~~dP~~R~t~~ell~  299 (342)
T cd07854         221 GAHELEQMQLILESVPVVREEDRNELLNVIPSFVRNDGGEPRRPLRDLLPGVN-PEALDFLEQILTFNPMDRLTAEEALM  299 (342)
T ss_pred             CCCHHHHHHHHHHhcCCCChHHhhhhhhhhhhhhhhcccccCCCHHHHccCCC-HHHHHHHHHHhCCCchhccCHHHHhC
Confidence            432110000                           0000111111   1123 67889999999999999999999999


Q ss_pred             HHHHH
Q 018699          321 KSFQD  325 (351)
Q Consensus       321 ~~~~~  325 (351)
                      |+|..
T Consensus       300 h~~~~  304 (342)
T cd07854         300 HPYMS  304 (342)
T ss_pred             CCccc
Confidence            98754

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi

>cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases

Probab=100.00  E-value=3.9e-36  Score=267.42  Aligned_cols=248  Identities=20%  Similarity=0.224  Sum_probs=188.0

Q ss_pred             EEEEEEeeccCceEEEEEEecCCCCceEEEEecCCCCCh---HHHHHHHHHhhhccccccccccceeeecccCeeEEEEE
Q 018699           50 YQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFPW---EFYMYRQLDQRISGRERSSFGFAHRIHLYSDYSILVCD  126 (351)
Q Consensus        50 Y~i~~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~~~---e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e  126 (351)
                      |++.+.||.|++|.||+|. +..+++.+++|.+......   ......++ .......++++.........++..++|+|
T Consensus         1 y~~~~~i~~g~~~~v~~~~-~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~-~~l~~l~~~~i~~~~~~~~~~~~~~~v~e   78 (283)
T cd05118           1 YQKLGKIGEGTYGVVYKAR-DKLTGEIVAIKKIKLRFESEGIPKTALREI-KLLKELNHPNIIKLLDVFRHKGDLYLVFE   78 (283)
T ss_pred             CccceeeecCCCceEEEEE-cCCCCcEEEEEEeccccccchhHHHHHHHH-HHHHHhcCCCcchHHHhhccCCCEEEEEe
Confidence            6788999999999999999 5677899999998765433   11122221 22333457788888887777889999999


Q ss_pred             ecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeeccCCCCCcccCCe
Q 018699          127 YLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSGPWQDQGL  206 (351)
Q Consensus       127 ~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~~~~~~~~~~~  206 (351)
                      |++ ++|.+.+...   +..+++..+..++.|++.|+.+||+++|+|+||+|+||+++                 .++.+
T Consensus        79 ~~~-~~l~~~l~~~---~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~p~nili~-----------------~~~~~  137 (283)
T cd05118          79 FMD-TDLYKLIKDR---QRGLPESLIKSYLYQLLQGLAFCHSHGILHRDLKPENLLIN-----------------TEGVL  137 (283)
T ss_pred             ccC-CCHHHHHHhh---cccCCHHHHHHHHHHHHHHHHHHHHCCeeecCcCHHHEEEC-----------------CCCcE
Confidence            995 5888888764   46789999999999999999999999999999999999999                 67789


Q ss_pred             EEeecCCccccccCCCCccccccccCCCcccceeccCC-CCCccchHhHHHHHHHHHHhCccccccccCCCC--------
Q 018699          207 CLVDWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQEKK-PWKFQVDTYGLCAIVHMMLHNSYMEIEKKASPD--------  277 (351)
Q Consensus       207 ~l~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~-~~~~~~DiwslG~il~~l~~g~~p~~~~~~~~~--------  277 (351)
                      +|+|||.+.......  .......++..|+|||.+.+. .++.++|+||||+++|+|++|+.||...+....        
T Consensus       138 ~l~df~~~~~~~~~~--~~~~~~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~~~~~~~~~~~~  215 (283)
T cd05118         138 KLADFGLARSFGSPV--RPYTHYVVTRWYRAPELLLGDKGYSTPVDIWSVGCIFAELLSRRPLFPGKSEIDQLFKIFRTL  215 (283)
T ss_pred             EEeeeeeeEecCCCc--ccccCccCcccccCcHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHc
Confidence            999999886543211  122334577889999998776 788999999999999999999998854332100        


Q ss_pred             --------Cc-----------eeeecCcc---hhhhhHHHHHHHHHHHHhcCCCCCChHHHHHHHHHH
Q 018699          278 --------GG-----------LVYLPKLS---FKRYWKVELWKSLFTNLLNMSSGNDKEVLQNLQKSF  323 (351)
Q Consensus       278 --------~~-----------~~~~~~~~---~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~~~~  323 (351)
                              ..           ........   .....+ ..+++||.+||++||.+||++.+++.|+|
T Consensus       216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~i~~~l~~~P~~Rp~~~~ll~~~~  282 (283)
T cd05118         216 GTPDPEVWPKFTSLARNYKFSFPKKAGMPLPKLFPNAS-PQALDLLSQMLHYDPHKRITAEQALAHPY  282 (283)
T ss_pred             CCCchHhcccchhhhhhhhhhhccccccCHHHhhhhhC-HHHHHHHHHHhccCcccCcCHHHHhhCCC
Confidence                    00           00000011   111122 78999999999999999999999999986

Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They

>cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases

Probab=100.00  E-value=3.1e-36  Score=263.57  Aligned_cols=245  Identities=11%  Similarity=0.079  Sum_probs=182.8

Q ss_pred             EEeeccCceEEEEEEecCCCCceEEEEecCCCCCh-HHHHHHHHHhhhccccccccccceeeecccCeeEEEEEecCCCC
Q 018699           54 GCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFPW-EFYMYRQLDQRISGRERSSFGFAHRIHLYSDYSILVCDYLSQGT  132 (351)
Q Consensus        54 ~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~~~-e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~s  132 (351)
                      ++||.|++|.||+|.+ .. ++.||+|.+...... ....+...........++++.............++||||+++++
T Consensus         1 ~~lg~g~~g~v~~~~~-~~-~~~v~~K~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~~~~   78 (251)
T cd05041           1 EKIGKGNFGDVYKGVL-KG-NTEVAVKTCRSTLPPDLKRKFLQEAEILKQYDHPNIVKLIGVCVQKQPIYIVMELVPGGS   78 (251)
T ss_pred             CccccCCCceEEEEEE-eC-CCcEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCeEEEEEEEecCCCeEEEEEcCCCCc
Confidence            4689999999999994 44 899999998765543 12222222233445567788777777777888999999999999


Q ss_pred             HHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeeccCCCCCcccCCeEEeecC
Q 018699          133 LQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSGPWQDQGLCLVDWG  212 (351)
Q Consensus       133 L~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~~~~~~~~~~~~l~Dfg  212 (351)
                      |.+++...   +..++...+..++.+++.++.+||+++++|+||+|+||+++                 .++.++|+|||
T Consensus        79 l~~~l~~~---~~~~~~~~~~~~~~~~~~~l~~lH~~~i~h~di~p~nili~-----------------~~~~~~l~d~g  138 (251)
T cd05041          79 LLTFLRKK---KNRLTVKKLLQMSLDAAAGMEYLESKNCIHRDLAARNCLVG-----------------ENNVLKISDFG  138 (251)
T ss_pred             HHHHHHhc---CCCCCHHHHHHHHHHHHHHHHHHHhCCEehhhcCcceEEEc-----------------CCCcEEEeecc
Confidence            99998763   35688999999999999999999999999999999999998                 67789999999


Q ss_pred             CccccccCCCCccccccccCCCcccceeccCCCCCccchHhHHHHHHHHHHh-CccccccccCCCCCcee-eecCcchhh
Q 018699          213 RGIDLHLFPDNMEFEGDCRTSGFRCIEMQEKKPWKFQVDTYGLCAIVHMMLH-NSYMEIEKKASPDGGLV-YLPKLSFKR  290 (351)
Q Consensus       213 ~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~-g~~p~~~~~~~~~~~~~-~~~~~~~~~  290 (351)
                      .+.................+..|+|||.+.+..++.++|+||||+++|+|++ |..||............ .......+.
T Consensus       139 ~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~i~~~l~t~~~~p~~~~~~~~~~~~~~~~~~~~~~~  218 (251)
T cd05041         139 MSREEEGGIYTVSDGLKQIPIKWTAPEALNYGRYTSESDVWSYGILLWETFSLGDTPYPGMSNQQTRERIESGYRMPAPQ  218 (251)
T ss_pred             ccccccCCcceeccccCcceeccCChHhhccCCCCcchhHHHHHHHHHHHHhccCCCCccCCHHHHHHHHhcCCCCCCCc
Confidence            8864321000000011223456999999988888999999999999999998 78887654322110000 011122233


Q ss_pred             hhHHHHHHHHHHHHhcCCCCCChHHHHHHHH
Q 018699          291 YWKVELWKSLFTNLLNMSSGNDKEVLQNLQK  321 (351)
Q Consensus       291 ~~~~~~~~~li~~~L~~dP~~R~s~~e~l~~  321 (351)
                      ..+ ..+.++|.+||..+|++||++.+++..
T Consensus       219 ~~~-~~~~~li~~~l~~~p~~Rp~~~ell~~  248 (251)
T cd05041         219 LCP-EEIYRLMLQCWAYDPENRPSFSEIYNE  248 (251)
T ss_pred             cCC-HHHHHHHHHHhccChhhCcCHHHHHHH
Confidence            333 789999999999999999999999864

Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k

>KOG0666 consensus Cyclin C-dependent kinase CDK8 [Transcription]

Probab=100.00  E-value=1.7e-37  Score=262.00  Aligned_cols=261  Identities=16%  Similarity=0.160  Sum_probs=189.9

Q ss_pred             eeEEEEEEeeccCceEEEEEEecC-CCC--ceEEEEecCCCCCh---HHHHHHHHHhhhccccccccccceeeecc-cCe
Q 018699           48 KKYQIKGCAGQGGFAKVFKAYVNG-DPE--DVVALKIQKPAFPW---EFYMYRQLDQRISGRERSSFGFAHRIHLY-SDY  120 (351)
Q Consensus        48 ~~Y~i~~~lg~G~~g~V~~a~~~~-~~~--~~vaiK~~~~~~~~---e~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~  120 (351)
                      ..|++...||+|+||.||+|.... +..  +.+|||.+..+...   .....+++. ......|++++.+..++.. +..
T Consensus        24 ~~ye~ig~Ig~GTYG~VykA~~~~~n~kr~k~yAiKkfk~~kd~tGiS~SAcREia-L~REl~h~nvi~Lv~Vfl~~d~~  102 (438)
T KOG0666|consen   24 FEYEGIGKIGRGTYGKVYKAVRKNTNDKRTKEYAIKKFKGEKDGTGISMSACREIA-LLRELKHPNVISLVKVFLSHDKK  102 (438)
T ss_pred             HHhhccceecccccceeeEeeeccCCcccchhhHHHHHhccCCCCCcCHHHHHHHH-HHHHhcCCcchhHHHHHhccCce
Confidence            579999999999999999996422 222  37899998755221   111111111 1223455677777777765 788


Q ss_pred             eEEEEEecCCCCHHHHHHHHH-hhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeeccCCCC
Q 018699          121 SILVCDYLSQGTLQDAINSYV-VIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSG  199 (351)
Q Consensus       121 ~~lv~e~~~~~sL~~~l~~~~-~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~~~~  199 (351)
                      +++++||.+. +|...|.-+. ...+.++...+..|+.||+.|+.|||++-|+||||||.||++..+..           
T Consensus       103 v~l~fdYAEh-DL~~II~fHr~~~~~~lp~~mvKsilwQil~Gv~YLH~NWvlHRDLKPaNIlvmgdgp-----------  170 (438)
T KOG0666|consen  103 VWLLFDYAEH-DLWHIIKFHRASKAKQLPRSMVKSILWQILDGVHYLHSNWVLHRDLKPANILVMGDGP-----------  170 (438)
T ss_pred             EEEEehhhhh-hHHHHHHHhccchhccCCHHHHHHHHHHHHhhhHHHhhhheeeccCCcceEEEeccCC-----------
Confidence            9999999965 8998887542 22457899999999999999999999999999999999999995543           


Q ss_pred             CcccCCeEEeecCCccccccCCCCc-cccccccCCCcccceeccC-CCCCccchHhHHHHHHHHHHhCccccccccCCCC
Q 018699          200 PWQDQGLCLVDWGRGIDLHLFPDNM-EFEGDCRTSGFRCIEMQEK-KPWKFQVDTYGLCAIVHMMLHNSYMEIEKKASPD  277 (351)
Q Consensus       200 ~~~~~~~~l~Dfg~a~~~~~~~~~~-~~~~~~g~~~y~aPE~~~~-~~~~~~~DiwslG~il~~l~~g~~p~~~~~~~~~  277 (351)
                        +.|.+||+|+|+++......... .....+-|..|+|||++.| ..|+.+.|+|++|||+.||++-.+.|........
T Consensus       171 --erG~VKIaDlGlaR~~~~plkpl~s~d~VVVTiWYRAPELLLGa~hYT~AiDvWAiGCIfaElLtl~PlF~g~E~k~~  248 (438)
T KOG0666|consen  171 --ERGRVKIADLGLARLFNNPLKPLASLDPVVVTIWYRAPELLLGARHYTKAIDVWAIGCIFAELLTLEPLFKGREEKIK  248 (438)
T ss_pred             --ccCeeEeecccHHHHhhccccccccCCceEEEEEecChHHhcccccccchhhhHHHHHHHHHHHccCccccchhhhcc
Confidence              57999999999997654222111 2334467889999999987 5689999999999999999999988765544322


Q ss_pred             Cce--------------------eeecCcchhhh--------------------hH-----HHHHHHHHHHHhcCCCCCC
Q 018699          278 GGL--------------------VYLPKLSFKRY--------------------WK-----VELWKSLFTNLLNMSSGND  312 (351)
Q Consensus       278 ~~~--------------------~~~~~~~~~~~--------------------~~-----~~~~~~li~~~L~~dP~~R  312 (351)
                      .+.                    .++.-..+|++                    +.     ++...+|+.+||++||-+|
T Consensus       249 ~~~Pfq~dQl~rIf~vLG~Pt~~~Wp~lkk~Pe~q~~ls~f~~~~~~n~sL~~~~~~~k~k~~~a~~LL~klL~yDP~kR  328 (438)
T KOG0666|consen  249 TKNPFQHDQLDRIFEVLGTPTDKDWPDLKKMPEYQTLLSDFRRHYYDNVSLHKYYHKHKVKDPSALDLLQKLLTYDPIKR  328 (438)
T ss_pred             cCCCchHHHHHHHHHHcCCCccccchhhhhCcchHHHHHHhHHhhcCcchHHHHHHHhcCCCchHHHHHHHHhccCchhh
Confidence            110                    11111112221                    11     1346789999999999999


Q ss_pred             hHHHHHHHHHH
Q 018699          313 KEVLQNLQKSF  323 (351)
Q Consensus       313 ~s~~e~l~~~~  323 (351)
                      +|++|+|+|++
T Consensus       329 Ita~qAleh~y  339 (438)
T KOG0666|consen  329 ITAEQALEHPY  339 (438)
T ss_pred             ccHHHHhcccc
Confidence            99999999975

>PHA02882 putative serine/threonine kinase; Provisional

Probab=100.00  E-value=8.5e-36  Score=267.08  Aligned_cols=254  Identities=16%  Similarity=0.193  Sum_probs=178.9

Q ss_pred             EEEEcCeeEEEEEEeeccCceEEEEEEecCCC---CceEEEEecCCCCC---hHHHHHHHHH--------hhhccccccc
Q 018699           42 TIEIGGKKYQIKGCAGQGGFAKVFKAYVNGDP---EDVVALKIQKPAFP---WEFYMYRQLD--------QRISGRERSS  107 (351)
Q Consensus        42 ~~~i~~~~Y~i~~~lg~G~~g~V~~a~~~~~~---~~~vaiK~~~~~~~---~e~~~~~~~~--------~~~~~~~~~~  107 (351)
                      ..++.+++|++.+.||+|+||+||+|.+ ..+   +..+|+|+......   .+......+.        .......+.+
T Consensus         6 ~~~i~~~~y~i~~~LG~G~fG~Vy~~~~-~~~~~~~~~~~~k~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~h~~   84 (294)
T PHA02882          6 LIDITGKEWKIDKLIGCGGFGCVYETQC-ASDHCINNQAVAKIENLENETIVMETLVYNNIYDIDKIALWKNIHNIDHLG   84 (294)
T ss_pred             eeccCCCceEEeeEEecCCCceEEEEEE-cCCcccccceEEEeccccCCchhhHHHHHHhhhhHHHHHHHHHhccCCCCC
Confidence            4567788999999999999999999995 344   56778886443221   1221111111        1222334555


Q ss_pred             cccceeeeccc----CeeEEEEEecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEE
Q 018699          108 FGFAHRIHLYS----DYSILVCDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLI  183 (351)
Q Consensus       108 ~~~~~~~~~~~----~~~~lv~e~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill  183 (351)
                      ++.........    ...+++++++ ..++.+.+...    ...++..+..++.|++.|+.|||+++|+||||||+||++
T Consensus        85 i~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~----~~~~~~~~~~i~~qi~~~l~~lH~~~iiHrDiKp~Nill  159 (294)
T PHA02882         85 IPKYYGCGSFKRCRMYYRFILLEKL-VENTKEIFKRI----KCKNKKLIKNIMKDMLTTLEYIHEHGISHGDIKPENIMV  159 (294)
T ss_pred             CCcEEEeeeEecCCceEEEEEEehh-ccCHHHHHHhh----ccCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEE
Confidence            55544433222    2447888887 55787777652    446788899999999999999999999999999999999


Q ss_pred             eecCCcceeeccCCCCCcccCCeEEeecCCccccccCCC-----CccccccccCCCcccceeccCCCCCccchHhHHHHH
Q 018699          184 RYARDELTVLDHDRSGPWQDQGLCLVDWGRGIDLHLFPD-----NMEFEGDCRTSGFRCIEMQEKKPWKFQVDTYGLCAI  258 (351)
Q Consensus       184 ~~~~~~~~~~~~~~~~~~~~~~~~l~Dfg~a~~~~~~~~-----~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~i  258 (351)
                      +                 .++.++|+|||++........     ........||+.|+|||++.+..++.++|||||||+
T Consensus       160 ~-----------------~~~~~~l~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~ape~~~~~~~~~~~DiwSlG~~  222 (294)
T PHA02882        160 D-----------------GNNRGYIIDYGIASHFIIHGKHIEYSKEQKDLHRGTLYYAGLDAHNGACVTRRGDLESLGYC  222 (294)
T ss_pred             c-----------------CCCcEEEEEcCCceeeccCCcccccccccccccCCCccccCHHHhCCCCCCcHHHHHHHHHH
Confidence            8                 667799999999865432111     111223468999999999999999999999999999


Q ss_pred             HHHHHhCccccccccCCCC------Cce---eeecCcchhhhhHHHHHHHHHHHHhcCCCCCChHHHHHHH
Q 018699          259 VHMMLHNSYMEIEKKASPD------GGL---VYLPKLSFKRYWKVELWKSLFTNLLNMSSGNDKEVLQNLQ  320 (351)
Q Consensus       259 l~~l~~g~~p~~~~~~~~~------~~~---~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~  320 (351)
                      +|+|++|..||........      ..+   ........+ ..+ +.+.+++..||..+|++||+..++++
T Consensus       223 l~el~~g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-~~~~~~~~~~~~~~~~~rp~~~~l~~  291 (294)
T PHA02882        223 MLKWAGIKLPWKGFGHNGNLIHAAKCDFIKRLHEGKIKIK-NAN-KFIYDFIECVTKLSYEEKPDYDALIK  291 (294)
T ss_pred             HHHHHhCCCCCCccccchHHHHHhHHHHHHHhhhhhhccC-CCC-HHHHHHHHHHHhCCCCCCCCHHHHHH
Confidence            9999999999976532210      000   001111111 122 77899999999999999999999875

>cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase

Probab=100.00  E-value=2.3e-36  Score=275.15  Aligned_cols=256  Identities=17%  Similarity=0.179  Sum_probs=189.4

Q ss_pred             eEEEEEEeeccCceEEEEEEecCCCCceEEEEecCCCCC--hHHHHHHHHHhhhccccccccccceeeecccC-----ee
Q 018699           49 KYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFP--WEFYMYRQLDQRISGRERSSFGFAHRIHLYSD-----YS  121 (351)
Q Consensus        49 ~Y~i~~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~~--~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~  121 (351)
                      +|++.+.||.|++|.||+|+ +..+++.||||.+.....  .....+...........++++.....+....+     ..
T Consensus         1 ~y~i~~~ig~g~~~~v~~~~-~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~~~   79 (330)
T cd07834           1 RYELLKPIGSGAYGVVCSAV-DKRTGRKVAIKKISNVFDDLIDAKRILREIKLLRHLRHENIIGLLDILRPPSPEDFNDV   79 (330)
T ss_pred             CceeeeeecCCCCeEEEEEE-eCCCCcEEEEEeeccccccchhhhhHHHHHHHHHhcCCcchhhhhhhhcccCcccccce
Confidence            69999999999999999999 567789999999876532  11111222222233444677777666665443     78


Q ss_pred             EEEEEecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeeccCCCCCc
Q 018699          122 ILVCDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSGPW  201 (351)
Q Consensus       122 ~lv~e~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~~~~~~  201 (351)
                      |+||||++ ++|.+++..    +..+++..++.++.|++.|+++||++||+|+||+|+||+++                 
T Consensus        80 ~lv~e~~~-~~l~~~l~~----~~~l~~~~~~~i~~~l~~~l~~LH~~gi~H~dlkp~nili~-----------------  137 (330)
T cd07834          80 YIVTELME-TDLHKVIKS----PQPLTDDHIQYFLYQILRGLKYLHSANVIHRDLKPSNILVN-----------------  137 (330)
T ss_pred             EEEecchh-hhHHHHHhC----CCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEc-----------------
Confidence            99999995 588888876    45899999999999999999999999999999999999999                 


Q ss_pred             ccCCeEEeecCCccccccCCCC-ccccccccCCCcccceeccCC-CCCccchHhHHHHHHHHHHhCccccccccCCCC--
Q 018699          202 QDQGLCLVDWGRGIDLHLFPDN-MEFEGDCRTSGFRCIEMQEKK-PWKFQVDTYGLCAIVHMMLHNSYMEIEKKASPD--  277 (351)
Q Consensus       202 ~~~~~~l~Dfg~a~~~~~~~~~-~~~~~~~g~~~y~aPE~~~~~-~~~~~~DiwslG~il~~l~~g~~p~~~~~~~~~--  277 (351)
                      .++.++|+|||++......... .......++..|+|||.+.+. .++.++|+||||+++|+|++|.+||........  
T Consensus       138 ~~~~~~L~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~il~~l~~g~~pf~~~~~~~~~~  217 (330)
T cd07834         138 SNCDLKICDFGLARGVDPDEDEKGFLTEYVVTRWYRAPELLLSSSRYTKAIDIWSVGCIFAELLTRKPLFPGRDYIDQLN  217 (330)
T ss_pred             CCCCEEEcccCceEeecccccccccccccccccCcCCceeeecccCCCcchhHHHHHHHHHHHHcCCCCcCCCCHHHHHH
Confidence            6788999999998754322110 123344578899999999877 788999999999999999999999864432100  


Q ss_pred             ------C-----ce-----------e--eec--Ccch---hhhhHHHHHHHHHHHHhcCCCCCChHHHHHHHHHHHHHHh
Q 018699          278 ------G-----GL-----------V--YLP--KLSF---KRYWKVELWKSLFTNLLNMSSGNDKEVLQNLQKSFQDYLC  328 (351)
Q Consensus       278 ------~-----~~-----------~--~~~--~~~~---~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~~~~~~~~~  328 (351)
                            +     ..           .  ...  ....   ....+ ..+.++|.+||+.+|++||++.+++.|+|..-+.
T Consensus       218 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~li~~~l~~~P~~Rpt~~~ll~~~~~~~~~  296 (330)
T cd07834         218 LIVEVLGTPSEEDLKFITSEKARNYLKSLPKKPKKPLSKLFPGAS-PEAIDLLEKMLVFDPKKRITADEALAHPYLAQLH  296 (330)
T ss_pred             HHHHhcCCCChhHhhhccccchhhHHhhcccCCcchhHHhcccCC-HHHHHHHHHHccCChhhCCCHHHHHhCccHHhhc
Confidence                  0     00           0  000  0000   01112 6789999999999999999999999998755433

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and

>KOG0695 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=1.1e-37  Score=265.71  Aligned_cols=260  Identities=17%  Similarity=0.209  Sum_probs=208.5

Q ss_pred             eEEEEcCeeEEEEEEeeccCceEEEEEEecCCCCceEEEEecCCCCChH---HHHHHHHHhhh-ccccccccccceeeec
Q 018699           41 KTIEIGGKKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFPWE---FYMYRQLDQRI-SGRERSSFGFAHRIHL  116 (351)
Q Consensus        41 ~~~~i~~~~Y~i~~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~~~e---~~~~~~~~~~~-~~~~~~~~~~~~~~~~  116 (351)
                      .+..+.-++|.+.++||+|+|+.|-+++ ...+.+.+|+|+++++..++   ....+...+.. ....++.++-++..+.
T Consensus       243 ~~~~l~l~df~ll~vigrgsyakvl~~~-~~~t~qiyamkvvkkel~nddedidwvqtek~vfe~asn~pflvglhscfq  321 (593)
T KOG0695|consen  243 ISQGLGLQDFDLLRVIGRGSYAKVLLVR-LKKTDQIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNNPFLVGLHSCFQ  321 (593)
T ss_pred             cccccccccceeeeeecCcchhhhhhee-hcccceeeehhhHHHHhcCCcccchhHHhhHHHHHhccCCCeEEehhhhhc
Confidence            4566777999999999999999999999 46788999999988754332   22222222222 2345666777778888


Q ss_pred             ccCeeEEEEEecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeeccC
Q 018699          117 YSDYSILVCDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHD  196 (351)
Q Consensus       117 ~~~~~~lv~e~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~  196 (351)
                      .+..+|+|.||+.||+|.-.+++    ...++++.++.+..+|+.||.|||++||++||||.+|++++            
T Consensus       322 tesrlffvieyv~ggdlmfhmqr----qrklpeeharfys~ei~lal~flh~rgiiyrdlkldnvlld------------  385 (593)
T KOG0695|consen  322 TESRLFFVIEYVNGGDLMFHMQR----QRKLPEEHARFYSAEICLALNFLHERGIIYRDLKLDNVLLD------------  385 (593)
T ss_pred             ccceEEEEEEEecCcceeeehhh----hhcCcHHHhhhhhHHHHHHHHHHhhcCeeeeeccccceEEc------------
Confidence            89999999999999999988887    57899999999999999999999999999999999999999            


Q ss_pred             CCCCcccCCeEEeecCCccccccCCCCccccccccCCCcccceeccCCCCCccchHhHHHHHHHHHHhCccccccccC--
Q 018699          197 RSGPWQDQGLCLVDWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQEKKPWKFQVDTYGLCAIVHMMLHNSYMEIEKKA--  274 (351)
Q Consensus       197 ~~~~~~~~~~~l~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~p~~~~~~--  274 (351)
                           +.|.+||+|+|++...  ..++...++++|||.|+|||++.|..|.+.+|+|+||+++++|+.|+.||..-..  
T Consensus       386 -----aeghikltdygmcke~--l~~gd~tstfcgtpnyiapeilrgeeygfsvdwwalgvlmfemmagrspfdivgm~n  458 (593)
T KOG0695|consen  386 -----AEGHIKLTDYGMCKEG--LGPGDTTSTFCGTPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPFDIVGMDN  458 (593)
T ss_pred             -----cCCceeecccchhhcC--CCCCcccccccCCCcccchhhhcccccCceehHHHHHHHHHHHHcCCCCcceecCCC
Confidence                 8899999999998752  3345567889999999999999999999999999999999999999999964321  


Q ss_pred             -CC-C----CceeeecCcchhhhhHHHHHHHHHHHHhcCCCCCChH------HHHHHHHHHHH
Q 018699          275 -SP-D----GGLVYLPKLSFKRYWKVELWKSLFTNLLNMSSGNDKE------VLQNLQKSFQD  325 (351)
Q Consensus       275 -~~-~----~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~s------~~e~l~~~~~~  325 (351)
                       .. +    .+.+......+|+..+ -.+..+++..|++||.+|..      ..++-.|+|..
T Consensus       459 ~d~ntedylfqvilekqiriprsls-vkas~vlkgflnkdp~erlgc~~~~g~~dik~h~ffr  520 (593)
T KOG0695|consen  459 PDMNTEDYLFQVILEKQIRIPRSLS-VKASHVLKGFLNKDPKERLGCRPQTGFSDIKSHAFFR  520 (593)
T ss_pred             cccchhHHHHHHHhhhcccccceee-hhhHHHHHHhhcCCcHHhcCCCcccchhhhhcchhhh
Confidence             10 1    1223344555666666 56678999999999999953      46666677643

>cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

Probab=100.00  E-value=2.2e-36  Score=268.18  Aligned_cols=246  Identities=15%  Similarity=0.136  Sum_probs=179.2

Q ss_pred             EeeccCceEEEEEEecC-----------------------CCCceEEEEecCCCCChHHHHHHHHHhhhccccccccccc
Q 018699           55 CAGQGGFAKVFKAYVNG-----------------------DPEDVVALKIQKPAFPWEFYMYRQLDQRISGRERSSFGFA  111 (351)
Q Consensus        55 ~lg~G~~g~V~~a~~~~-----------------------~~~~~vaiK~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~  111 (351)
                      .||+|+||.||+|.+..                       .....|++|++..........+.+.........|++++.+
T Consensus         2 ~lG~G~~~~vy~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~~~~~~~l~h~niv~~   81 (274)
T cd05076           2 HLGQGTRTNIYDGRLRVEGGGEPEEDEMEDEDPLVEGNNNGRELRVVLKVLDPSHRDIALAFFETASLMSQVSHIHLAFV   81 (274)
T ss_pred             CcCcccccceecceeEeccCCCCcccccccccccccccCCCeeeeEEEEecChHHHHHHHHHHHHHHHHhcCCCCCeeeE
Confidence            68999999999998421                       1124588898865433222222222334456678899999


Q ss_pred             eeeecccCeeEEEEEecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcce
Q 018699          112 HRIHLYSDYSILVCDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELT  191 (351)
Q Consensus       112 ~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~  191 (351)
                      ..+....+..++||||+++++|..++...   ...+++..+..++.|++.|+.|||++||+|+||||+||+++...... 
T Consensus        82 ~~~~~~~~~~~lv~ey~~~g~L~~~l~~~---~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~dlkp~Nill~~~~~~~-  157 (274)
T cd05076          82 HGVCVRGSENIMVEEFVEHGPLDVCLRKE---KGRVPVAWKITVAQQLASALSYLEDKNLVHGNVCAKNILLARLGLAE-  157 (274)
T ss_pred             EEEEEeCCceEEEEecCCCCcHHHHHHhc---CCCCCHHHHHHHHHHHHHHHHHHHcCCccCCCCCcccEEEeccCccc-
Confidence            98888888999999999999999988653   45788999999999999999999999999999999999998432110 


Q ss_pred             eeccCCCCCcccCCeEEeecCCccccccCCCCccccccccCCCcccceeccC-CCCCccchHhHHHHHHHHHH-hCcccc
Q 018699          192 VLDHDRSGPWQDQGLCLVDWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQEK-KPWKFQVDTYGLCAIVHMML-HNSYME  269 (351)
Q Consensus       192 ~~~~~~~~~~~~~~~~l~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~~DiwslG~il~~l~-~g~~p~  269 (351)
                               ...+.++++|||.+.....      .....++..|+|||.+.+ ..++.++|||||||++|+++ +|..||
T Consensus       158 ---------~~~~~~kl~d~g~~~~~~~------~~~~~~~~~~~aPe~~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~  222 (274)
T cd05076         158 ---------GTSPFIKLSDPGVSFTALS------REERVERIPWIAPECVPGGNSLSTAADKWSFGTTLLEICFDGEVPL  222 (274)
T ss_pred             ---------CccceeeecCCcccccccc------ccccccCCcccCchhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCc
Confidence                     0234589999998753211      122346788999998865 56789999999999999985 688888


Q ss_pred             ccccCCCCCceeeecCcchhhhhHHHHHHHHHHHHhcCCCCCChHHHHHHHH
Q 018699          270 IEKKASPDGGLVYLPKLSFKRYWKVELWKSLFTNLLNMSSGNDKEVLQNLQK  321 (351)
Q Consensus       270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~~  321 (351)
                      ........... .......+.... ..+.++|.+||+.+|++||++.+++++
T Consensus       223 ~~~~~~~~~~~-~~~~~~~~~~~~-~~~~~li~~cl~~~p~~Rps~~~il~~  272 (274)
T cd05076         223 KERTPSEKERF-YEKKHRLPEPSC-KELATLISQCLTYEPTQRPSFRTILRD  272 (274)
T ss_pred             cccChHHHHHH-HHhccCCCCCCC-hHHHHHHHHHcccChhhCcCHHHHHHh
Confidence            65433211010 011111222222 578999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt

>PHA03210 serine/threonine kinase US3; Provisional

Probab=100.00  E-value=3.6e-36  Score=287.51  Aligned_cols=259  Identities=13%  Similarity=0.083  Sum_probs=179.5

Q ss_pred             eeEEEEEEeeccCceEEEEEEecCCCCceEEEEecC--------------CCCCh---HHHHHHHHHhhhcccccccccc
Q 018699           48 KKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQK--------------PAFPW---EFYMYRQLDQRISGRERSSFGF  110 (351)
Q Consensus        48 ~~Y~i~~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~--------------~~~~~---e~~~~~~~~~~~~~~~~~~~~~  110 (351)
                      ++|++.+.||+|+||+||+|.++...+..+++|.+.              +....   ....+......+....|++++.
T Consensus       148 ~~Y~ii~~LG~G~fG~Vyl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~Ei~il~~l~HpnIv~  227 (501)
T PHA03210        148 AHFRVIDDLPAGAFGKIFICALRASTEEAEARRGVNSTNQGKPKCERLIAKRVKAGSRAAIQLENEILALGRLNHENILK  227 (501)
T ss_pred             hccEEEeEecCCCCcceEEEEEeccchhhhhhhccccccccchhhhhhHhHHhhcchHHHHHHHHHHHHHHhCCCCCcCc
Confidence            689999999999999999998644444443333111              10000   1111111122344557888988


Q ss_pred             ceeeecccCeeEEEEEecCCCCHHHHHHHHH-hhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCc
Q 018699          111 AHRIHLYSDYSILVCDYLSQGTLQDAINSYV-VIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDE  189 (351)
Q Consensus       111 ~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~-~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~  189 (351)
                      +..+....+..|+|++++ +++|.+++.... ..........++.++.||+.||.|||++||+||||||+||+++     
T Consensus       228 l~~~~~~~~~~~lv~e~~-~~~l~~~l~~~~~~~~~~~~~~~~~~i~~ql~~aL~yLH~~gIiHrDLKP~NILl~-----  301 (501)
T PHA03210        228 IEEILRSEANTYMITQKY-DFDLYSFMYDEAFDWKDRPLLKQTRAIMKQLLCAVEYIHDKKLIHRDIKLENIFLN-----  301 (501)
T ss_pred             EeEEEEECCeeEEEEecc-ccCHHHHHhhccccccccccHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEC-----
Confidence            888888888999999999 567877765421 0012234566788999999999999999999999999999998     


Q ss_pred             ceeeccCCCCCcccCCeEEeecCCccccccCCCCccccccccCCCcccceeccCCCCCccchHhHHHHHHHHHHhCcccc
Q 018699          190 LTVLDHDRSGPWQDQGLCLVDWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQEKKPWKFQVDTYGLCAIVHMMLHNSYME  269 (351)
Q Consensus       190 ~~~~~~~~~~~~~~~~~~l~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~p~  269 (351)
                                  .++.++|+|||++...... .........|+..|+|||++.+..++.++|||||||++|+|++|..++
T Consensus       302 ------------~~~~vkL~DFGla~~~~~~-~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~~~~~p  368 (501)
T PHA03210        302 ------------CDGKIVLGDFGTAMPFEKE-REAFDYGWVGTVATNSPEILAGDGYCEITDIWSCGLILLDMLSHDFCP  368 (501)
T ss_pred             ------------CCCCEEEEeCCCceecCcc-cccccccccCCcCCCCchhhcCCCCCcHHHHHHHHHHHHHHHHCCCCC
Confidence                        6788999999998654311 111223457899999999999999999999999999999999988654


Q ss_pred             ccccCCCC-------------Cceee-----------------ecCcchhhhhH----HHHHHHHHHHHhcCCCCCChHH
Q 018699          270 IEKKASPD-------------GGLVY-----------------LPKLSFKRYWK----VELWKSLFTNLLNMSSGNDKEV  315 (351)
Q Consensus       270 ~~~~~~~~-------------~~~~~-----------------~~~~~~~~~~~----~~~~~~li~~~L~~dP~~R~s~  315 (351)
                      ........             ....+                 ......+..+.    ...+.++|.+||++||.+||++
T Consensus       369 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~li~kmL~~DP~~Rpsa  448 (501)
T PHA03210        369 IGDGGGKPGKQLLKIIDSLSVCDEEFPDPPCKLFDYIDSAEIDHAGHSVPPLIRNLGLPADFEYPLVKMLTFDWHLRPGA  448 (501)
T ss_pred             ccCCCCCHHHHHHHHHHhcccChhhcCCcHHHHHHHhhhhhcccCccchhhHHHhcCCChHHHHHHHHHhccCcccCcCH
Confidence            32211000             00000                 00001111111    1567788999999999999999


Q ss_pred             HHHHHHHHHH
Q 018699          316 LQNLQKSFQD  325 (351)
Q Consensus       316 ~e~l~~~~~~  325 (351)
                      .|+|.|||..
T Consensus       449 ~elL~hp~f~  458 (501)
T PHA03210        449 AELLALPLFS  458 (501)
T ss_pred             HHHhhChhhh
Confidence            9999998754

>cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases

Probab=100.00  E-value=3.9e-36  Score=267.21  Aligned_cols=260  Identities=12%  Similarity=0.097  Sum_probs=189.6

Q ss_pred             EcCeeEEEEEEeeccCceEEEEEEecCCCC----ceEEEEecCCCCChH-HHHHHHHHhhhccccccccccceeeecccC
Q 018699           45 IGGKKYQIKGCAGQGGFAKVFKAYVNGDPE----DVVALKIQKPAFPWE-FYMYRQLDQRISGRERSSFGFAHRIHLYSD  119 (351)
Q Consensus        45 i~~~~Y~i~~~lg~G~~g~V~~a~~~~~~~----~~vaiK~~~~~~~~e-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  119 (351)
                      +...+|++.+.||+|+||+||+|.+. .+|    ..||+|......... ...+......+....++++.....+... .
T Consensus         4 ~~~~~~~~~~~ig~g~~g~v~~~~~~-~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~   81 (279)
T cd05057           4 LKETELEKIKVLGSGAFGTVYKGVWI-PEGEKVKIPVAIKVLREETSPKANKEILDEAYVMASVDHPHVVRLLGICLS-S   81 (279)
T ss_pred             cCHHHcEEcceecCCCCccEEEEEEe-cCCCCcceEEEEEeccCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEec-C
Confidence            45689999999999999999999953 333    368999887654322 1112222223344567777777766654 7


Q ss_pred             eeEEEEEecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeeccCCCC
Q 018699          120 YSILVCDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSG  199 (351)
Q Consensus       120 ~~~lv~e~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~~~~  199 (351)
                      ..++||||+++++|.+++...   ...+++..+..++.|++.|++|||++|++|+||+|+||+++               
T Consensus        82 ~~~~v~e~~~~g~L~~~l~~~---~~~~~~~~~~~~~~qi~~~l~~LH~~~i~H~di~p~nil~~---------------  143 (279)
T cd05057          82 QVQLITQLMPLGCLLDYVRNH---KDNIGSQYLLNWCVQIAKGMSYLEEKRLVHRDLAARNVLVK---------------  143 (279)
T ss_pred             ceEEEEecCCCCcHHHHHHhc---cCCCCHHHHHHHHHHHHHHHHHHHhCCEEecccCcceEEEc---------------
Confidence            889999999999999998764   35689999999999999999999999999999999999998               


Q ss_pred             CcccCCeEEeecCCccccccCCCCccccccccCCCcccceeccCCCCCccchHhHHHHHHHHHHh-CccccccccCCCCC
Q 018699          200 PWQDQGLCLVDWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQEKKPWKFQVDTYGLCAIVHMMLH-NSYMEIEKKASPDG  278 (351)
Q Consensus       200 ~~~~~~~~l~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~-g~~p~~~~~~~~~~  278 (351)
                        .++.++|+|||.+................++..|+|||.+....++.++|+||||+++|++++ |..||.........
T Consensus       144 --~~~~~kL~dfg~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~  221 (279)
T cd05057         144 --TPQHVKITDFGLAKLLDVDEKEYHAEGGKVPIKWMALESILHRIYTHKSDVWSYGVTVWELMTFGAKPYEGIPAVEIP  221 (279)
T ss_pred             --CCCeEEECCCcccccccCcccceecCCCcccccccCHHHhhcCCcCchhhHHHHHHHHHHHhcCCCCCCCCCCHHHHH
Confidence              667799999998865432111111111223567999999988888999999999999999998 99998654322100


Q ss_pred             -ceeeecCcchhhhhHHHHHHHHHHHHhcCCCCCChHHHHHHHHHHHHHHh
Q 018699          279 -GLVYLPKLSFKRYWKVELWKSLFTNLLNMSSGNDKEVLQNLQKSFQDYLC  328 (351)
Q Consensus       279 -~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~~~~~~~~~  328 (351)
                       ........+.+...+ ..+.+++.+||..||+.||++.+++. .+.....
T Consensus       222 ~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~~p~~Rp~~~~l~~-~l~~~~~  270 (279)
T cd05057         222 DLLEKGERLPQPPICT-IDVYMVLVKCWMIDAESRPTFKELIN-EFSKMAR  270 (279)
T ss_pred             HHHhCCCCCCCCCCCC-HHHHHHHHHHcCCChhhCCCHHHHHH-HHHHHHh
Confidence             111111222233333 67899999999999999999998654 3444433

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea

>cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3

Probab=100.00  E-value=6.8e-36  Score=270.07  Aligned_cols=249  Identities=17%  Similarity=0.140  Sum_probs=190.4

Q ss_pred             eeEEEEEEeeccCceEEEEEEecCCCCceEEEEecCCCCChHH----HHHHHHHhhhccccccccccceeeecccCeeEE
Q 018699           48 KKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFPWEF----YMYRQLDQRISGRERSSFGFAHRIHLYSDYSIL  123 (351)
Q Consensus        48 ~~Y~i~~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~~~e~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  123 (351)
                      +.|...+.||+|++|+||+|+ +..+++.|++|++........    ....+ ........++++.....+.......|+
T Consensus        21 ~~~~~~~~lg~g~~g~v~~~~-~~~~~~~v~ik~~~~~~~~~~~~~~~~~~E-~~~l~~l~h~~iv~~~~~~~~~~~~~l   98 (313)
T cd06633          21 EIFVGLHEIGHGSFGAVYFAT-NSHTNEVVAVKKMSYSGKQTNEKWQDIIKE-VKFLQQLKHPNTIEYKGCYLKEHTAWL   98 (313)
T ss_pred             HHhhcceeeccCCCeEEEEEE-ECCCCcEEEEEEEeccccCchHHHHHHHHH-HHHHHhCCCCCCccEEEEEEeCCEEEE
Confidence            447778899999999999999 567789999999865433211    12222 233445567888888888888889999


Q ss_pred             EEEecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeeccCCCCCccc
Q 018699          124 VCDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSGPWQD  203 (351)
Q Consensus       124 v~e~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~~~~~~~~  203 (351)
                      ||||+ .+++.+++...   +.++++..+..++.|++.|+.|||++|++|+||+|+||+++                 .+
T Consensus        99 v~e~~-~~~l~~~l~~~---~~~l~~~~~~~~~~qi~~al~~LH~~gi~H~dl~p~nili~-----------------~~  157 (313)
T cd06633          99 VMEYC-LGSASDLLEVH---KKPLQEVEIAAITHGALQGLAYLHSHNMIHRDIKAGNILLT-----------------EP  157 (313)
T ss_pred             EEecC-CCCHHHHHHhc---CCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCChhhEEEC-----------------CC
Confidence            99999 46888877654   46789999999999999999999999999999999999998                 67


Q ss_pred             CCeEEeecCCccccccCCCCccccccccCCCcccceecc---CCCCCccchHhHHHHHHHHHHhCccccccccCCCCCc-
Q 018699          204 QGLCLVDWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQE---KKPWKFQVDTYGLCAIVHMMLHNSYMEIEKKASPDGG-  279 (351)
Q Consensus       204 ~~~~l~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~---~~~~~~~~DiwslG~il~~l~~g~~p~~~~~~~~~~~-  279 (351)
                      +.++|+|||.+....      ......++..|+|||.+.   +..++.++|||||||++|+|++|..||.......... 
T Consensus       158 ~~~kL~dfg~~~~~~------~~~~~~~~~~y~aPE~~~~~~~~~~~~~sDv~slGvil~el~~g~~p~~~~~~~~~~~~  231 (313)
T cd06633         158 GQVKLADFGSASKSS------PANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYH  231 (313)
T ss_pred             CCEEEeecCCCcccC------CCCCccccccccChhhccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHH
Confidence            789999999875321      123456788999999984   3567889999999999999999999987644321000 


Q ss_pred             ee-eecCcchhhhhHHHHHHHHHHHHhcCCCCCChHHHHHHHHHHHHH
Q 018699          280 LV-YLPKLSFKRYWKVELWKSLFTNLLNMSSGNDKEVLQNLQKSFQDY  326 (351)
Q Consensus       280 ~~-~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~~~~~~~  326 (351)
                      .. ...+......++ ..+++||.+||+++|.+||++.++++|+|...
T Consensus       232 ~~~~~~~~~~~~~~~-~~l~~li~~~l~~~P~~Rp~~~~~l~~~~~~~  278 (313)
T cd06633         232 IAQNDSPTLQSNEWT-DSFRGFVDYCLQKIPQERPASAELLRHDFVRR  278 (313)
T ss_pred             HHhcCCCCCCccccC-HHHHHHHHHHccCChhhCcCHHHHhcCcccCC
Confidence            00 001111122233 67899999999999999999999999987543

Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co

>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]

Probab=100.00  E-value=2.9e-37  Score=283.56  Aligned_cols=246  Identities=17%  Similarity=0.181  Sum_probs=196.6

Q ss_pred             CeeEEEEEEeeccCceEEEEEEecCCCCceEEEEecCCCCChHHHHHHHHHhhhccccccccccceeeecccCeeEEEEE
Q 018699           47 GKKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFPWEFYMYRQLDQRISGRERSSFGFAHRIHLYSDYSILVCD  126 (351)
Q Consensus        47 ~~~Y~i~~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e  126 (351)
                      ...|++...+|.|+|+.|-.+. +..+++..++|++.+....   ..+...-......|++++..+.++..+...|+|||
T Consensus       321 ~~~y~~~~~~~~gs~s~~~~~~-~~~t~~~~~vkii~~~~~~---~~~e~~~~~~~~~h~niv~~~~v~~~~~~~~~v~e  396 (612)
T KOG0603|consen  321 TESYEFREELGEGSFSAVKYCE-SSPTDQEPAVKIISKRADD---NQDEIPISLLVRDHPNIVKSHDVYEDGKEIYLVME  396 (612)
T ss_pred             chhhccccccCCCCccceeeee-ccccccchhheeccccccc---cccccchhhhhcCCCcceeecceecCCceeeeeeh
Confidence            4689999999999999999999 5778889999998876211   11111122334567889999999999999999999


Q ss_pred             ecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeeccCCCCCcccCCe
Q 018699          127 YLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSGPWQDQGL  206 (351)
Q Consensus       127 ~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~~~~~~~~~~~  206 (351)
                      ++.|+-+.+.+..    .+.+. ..+..|+.+|+.|+.|||++||+||||||+||+++.                +.+.+
T Consensus       397 ~l~g~ell~ri~~----~~~~~-~e~~~w~~~lv~Av~~LH~~gvvhRDLkp~NIL~~~----------------~~g~l  455 (612)
T KOG0603|consen  397 LLDGGELLRRIRS----KPEFC-SEASQWAAELVSAVDYLHEQGVVHRDLKPGNILLDG----------------SAGHL  455 (612)
T ss_pred             hccccHHHHHHHh----cchhH-HHHHHHHHHHHHHHHHHHhcCeeecCCChhheeecC----------------CCCcE
Confidence            9999888887766    23344 778889999999999999999999999999999951                67789


Q ss_pred             EEeecCCccccccCCCCccccccccCCCcccceeccCCCCCccchHhHHHHHHHHHHhCccccccccCCCCCceeeecCc
Q 018699          207 CLVDWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQEKKPWKFQVDTYGLCAIVHMMLHNSYMEIEKKASPDGGLVYLPKL  286 (351)
Q Consensus       207 ~l~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~  286 (351)
                      +|+|||.+......     ..+.+-|..|.|||++....|+.++||||||++||+|++|+.||........ ........
T Consensus       456 rltyFG~a~~~~~~-----~~tp~~t~~y~APEvl~~~~yt~acD~WSLGvlLy~ML~G~tp~~~~P~~~e-i~~~i~~~  529 (612)
T KOG0603|consen  456 RLTYFGFWSELERS-----CDTPALTLQYVAPEVLAIQEYTEACDWWSLGVLLYEMLTGRTLFAAHPAGIE-IHTRIQMP  529 (612)
T ss_pred             EEEEechhhhCchh-----hcccchhhcccChhhhccCCCCcchhhHHHHHHHHHHHhCCCccccCCchHH-HHHhhcCC
Confidence            99999998754322     3344567889999999999999999999999999999999999986554311 11112223


Q ss_pred             chhhhhHHHHHHHHHHHHhcCCCCCChHHHHHHHHHHH
Q 018699          287 SFKRYWKVELWKSLFTNLLNMSSGNDKEVLQNLQKSFQ  324 (351)
Q Consensus       287 ~~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~~~~~  324 (351)
                      ++....+ +.+++||..||++||.+|+++.++..|+|.
T Consensus       530 ~~s~~vS-~~AKdLl~~LL~~dP~~Rl~~~~i~~h~w~  566 (612)
T KOG0603|consen  530 KFSECVS-DEAKDLLQQLLQVDPALRLGADEIGAHPWF  566 (612)
T ss_pred             ccccccC-HHHHHHHHHhccCChhhCcChhhhccCcch
Confidence            3334455 999999999999999999999999999986

>cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4

Probab=100.00  E-value=3e-36  Score=269.68  Aligned_cols=254  Identities=19%  Similarity=0.143  Sum_probs=191.4

Q ss_pred             EEEEEEeeccCceEEEEEEecCCCCceEEEEecCCCCChHHHHHHHHHhhhccccccccccceeeecccCeeEEEEEecC
Q 018699           50 YQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFPWEFYMYRQLDQRISGRERSSFGFAHRIHLYSDYSILVCDYLS  129 (351)
Q Consensus        50 Y~i~~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~  129 (351)
                      |....+||+|++|.||+|. ...+++.||+|++..........+...........+++++.....+..++..++||||++
T Consensus        22 ~~~~~~lg~g~~g~v~~~~-~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~  100 (292)
T cd06657          22 LDNFIKIGEGSTGIVCIAT-VKSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLE  100 (292)
T ss_pred             hhhHHHcCCCCCeEEEEEE-EcCCCeEEEEEEecccchhHHHHHHHHHHHHHhcCCcchhheeeEEEeCCEEEEEEecCC
Confidence            3345689999999999999 567789999998764332222222222223445567788888888888899999999999


Q ss_pred             CCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeeccCCCCCcccCCeEEe
Q 018699          130 QGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSGPWQDQGLCLV  209 (351)
Q Consensus       130 ~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~~~~~~~~~~~~l~  209 (351)
                      +++|.+++..     ..+++..++.++.|++.|++|||++|++|+||+|+||+++                 .++.++|+
T Consensus       101 ~~~L~~~~~~-----~~~~~~~~~~~~~ql~~~l~~lH~~givH~dl~p~Nilv~-----------------~~~~~~l~  158 (292)
T cd06657         101 GGALTDIVTH-----TRMNEEQIAAVCLAVLKALSVLHAQGVIHRDIKSDSILLT-----------------HDGRVKLS  158 (292)
T ss_pred             CCcHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEC-----------------CCCCEEEc
Confidence            9999987754     4688999999999999999999999999999999999999                 67789999


Q ss_pred             ecCCccccccCCCCccccccccCCCcccceeccCCCCCccchHhHHHHHHHHHHhCccccccccCCCCCce---eeecCc
Q 018699          210 DWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQEKKPWKFQVDTYGLCAIVHMMLHNSYMEIEKKASPDGGL---VYLPKL  286 (351)
Q Consensus       210 Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~p~~~~~~~~~~~~---~~~~~~  286 (351)
                      |||.+......  ........++..|+|||.+.+..++.++|+||+|+++|+|++|..||...........   ......
T Consensus       159 dfg~~~~~~~~--~~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slGvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~  236 (292)
T cd06657         159 DFGFCAQVSKE--VPRRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLPPKL  236 (292)
T ss_pred             ccccceecccc--cccccccccCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhhCCccc
Confidence            99987543211  1122334678899999999888889999999999999999999999864332100000   001111


Q ss_pred             chhhhhHHHHHHHHHHHHhcCCCCCChHHHHHHHHHHHHHHhh
Q 018699          287 SFKRYWKVELWKSLFTNLLNMSSGNDKEVLQNLQKSFQDYLCS  329 (351)
Q Consensus       287 ~~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~~~~~~~~~~  329 (351)
                      ......+ ..+.++|.+||..||.+||++.+++.|+|......
T Consensus       237 ~~~~~~~-~~l~~li~~~l~~~P~~R~~~~~ll~~~~~~~~~~  278 (292)
T cd06657         237 KNLHKVS-PSLKGFLDRLLVRDPAQRATAAELLKHPFLAKAGP  278 (292)
T ss_pred             CCcccCC-HHHHHHHHHHHhCCcccCcCHHHHhcChHHhccCC
Confidence            1111123 67889999999999999999999999987554443

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo

>cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4

Probab=100.00  E-value=1.4e-35  Score=262.90  Aligned_cols=257  Identities=10%  Similarity=0.074  Sum_probs=187.9

Q ss_pred             cCeeEEEEEEeeccCceEEEEEEecC----CCCceEEEEecCCCCCh-HHHHHHHHHhhhccccccccccceeeecccCe
Q 018699           46 GGKKYQIKGCAGQGGFAKVFKAYVNG----DPEDVVALKIQKPAFPW-EFYMYRQLDQRISGRERSSFGFAHRIHLYSDY  120 (351)
Q Consensus        46 ~~~~Y~i~~~lg~G~~g~V~~a~~~~----~~~~~vaiK~~~~~~~~-e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  120 (351)
                      ..++|++.+.||.|+||.||+|++..    ...+.|++|.+...... ...........+....|++++.........+.
T Consensus         3 ~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~   82 (275)
T cd05046           3 PRSNLQEITTLGRGEFGEVFLAKAKGIEEEGGETLVLVKALQKTKDENLQSEFRRELDMFRKLSHKNVVRLLGLCREAEP   82 (275)
T ss_pred             ChHhceeeeeecccceeEEEEEEeccCCcCCCcceEEEEccCCccchHHHHHHHHHHHHHHhcCCcceeeeEEEECCCCc
Confidence            34789999999999999999999632    23578999988654332 11112222223444567788777777777788


Q ss_pred             eEEEEEecCCCCHHHHHHHHHhhC-----CChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeecc
Q 018699          121 SILVCDYLSQGTLQDAINSYVVIG-----KSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDH  195 (351)
Q Consensus       121 ~~lv~e~~~~~sL~~~l~~~~~~~-----~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~  195 (351)
                      .++||||+++++|.+++.......     ..+++..+..++.|++.|++|||+++|+|+||+|+||+++           
T Consensus        83 ~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~l~~LH~~~i~H~dlkp~Nili~-----------  151 (275)
T cd05046          83 HYMILEYTDLGDLKQFLRATKSKDEKLKPPPLSTKQKVALCTQIALGMDHLSNARFVHRDLAARNCLVS-----------  151 (275)
T ss_pred             ceEEEEecCCCcHHHHHHhcccccccccccCCCHHHHHHHHHHHHHHHHHhhhcCcccCcCccceEEEe-----------
Confidence            999999999999999998642100     1689999999999999999999999999999999999999           


Q ss_pred             CCCCCcccCCeEEeecCCccccccCCCCccccccccCCCcccceeccCCCCCccchHhHHHHHHHHHHh-CccccccccC
Q 018699          196 DRSGPWQDQGLCLVDWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQEKKPWKFQVDTYGLCAIVHMMLH-NSYMEIEKKA  274 (351)
Q Consensus       196 ~~~~~~~~~~~~l~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~-g~~p~~~~~~  274 (351)
                            .++.++++|||.+..... ..........++..|+|||.+.+..++.++||||||+++|++++ |..||.....
T Consensus       152 ------~~~~~~l~~~~~~~~~~~-~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~~~~~p~~~~~~  224 (275)
T cd05046         152 ------SQREVKVSLLSLSKDVYN-SEYYKLRNALIPLRWLAPEAVQEDDFSTKSDVWSFGVLMWEVFTQGELPFYGLSD  224 (275)
T ss_pred             ------CCCcEEEcccccccccCc-ccccccCCceeEEeecChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCccccch
Confidence                  677899999998753211 11112233345677999999988888899999999999999998 7788854322


Q ss_pred             CCCCceee--ecCcchhhhhHHHHHHHHHHHHhcCCCCCChHHHHHHHH
Q 018699          275 SPDGGLVY--LPKLSFKRYWKVELWKSLFTNLLNMSSGNDKEVLQNLQK  321 (351)
Q Consensus       275 ~~~~~~~~--~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~~  321 (351)
                      ........  ......+...+ ..+.+++.+||..||.+||++.+++..
T Consensus       225 ~~~~~~~~~~~~~~~~~~~~~-~~l~~~i~~~l~~~p~~Rp~~~~~l~~  272 (275)
T cd05046         225 EEVLNRLQAGKLELPVPEGCP-SRLYKLMTRCWAVNPKDRPSFSELVSA  272 (275)
T ss_pred             HHHHHHHHcCCcCCCCCCCCC-HHHHHHHHHHcCCCcccCCCHHHHHHH
Confidence            11000000  00011122223 788999999999999999999998875

Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s

>cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein

Probab=100.00  E-value=2.7e-36  Score=269.75  Aligned_cols=255  Identities=13%  Similarity=0.075  Sum_probs=187.1

Q ss_pred             eEEEEEEeeccCceEEEEEEecC----CCCceEEEEecCCCCCh-HHHHHHHHHhhhccccccccccceeeecccCeeEE
Q 018699           49 KYQIKGCAGQGGFAKVFKAYVNG----DPEDVVALKIQKPAFPW-EFYMYRQLDQRISGRERSSFGFAHRIHLYSDYSIL  123 (351)
Q Consensus        49 ~Y~i~~~lg~G~~g~V~~a~~~~----~~~~~vaiK~~~~~~~~-e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  123 (351)
                      +|++.+.||+|+||+||+|.+..    .....+++|.+...... +...+......+....|++++.....+...+..++
T Consensus         1 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l   80 (290)
T cd05045           1 NLVLGKTLGEGEFGKVVKATAFRLKGRAGYTTVAVKMLKENASSSELRDLLSEFNLLKQVNHPHVIKLYGACSQDGPLLL   80 (290)
T ss_pred             CccccccccCcCCcceEEEEEecCCCCCcceeEEEEecCCCCCHHHHHHHHHHHHHHhhCCCCCEeeEEEEEecCCCcEE
Confidence            48899999999999999998522    23357899988755432 12222222234445567888888777777888999


Q ss_pred             EEEecCCCCHHHHHHHHHh--------------------hCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEE
Q 018699          124 VCDYLSQGTLQDAINSYVV--------------------IGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLI  183 (351)
Q Consensus       124 v~e~~~~~sL~~~l~~~~~--------------------~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill  183 (351)
                      ++||+.+++|.+++.....                    ....+++..++.++.|++.|+.|||++|++|+||+|+||++
T Consensus        81 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~ivH~dikp~nill  160 (290)
T cd05045          81 IVEYAKYGSLRSFLRESRKVGPSYLGSDGNRNSSYLDNPDERALTMGDLISFAWQISRGMQYLAEMKLVHRDLAARNVLV  160 (290)
T ss_pred             EEEecCCCCHHHHHHhcCCccccccccccccccccccCccccccCHHHHHHHHHHHHHHHHHHHHCCeehhhhhhheEEE
Confidence            9999999999999875321                    01357889999999999999999999999999999999999


Q ss_pred             eecCCcceeeccCCCCCcccCCeEEeecCCccccccCCCCccccccccCCCcccceeccCCCCCccchHhHHHHHHHHHH
Q 018699          184 RYARDELTVLDHDRSGPWQDQGLCLVDWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQEKKPWKFQVDTYGLCAIVHMML  263 (351)
Q Consensus       184 ~~~~~~~~~~~~~~~~~~~~~~~~l~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~l~  263 (351)
                      +                 .++.++|+|||++................++..|+|||.+.+..++.++||||||+++|+|+
T Consensus       161 ~-----------------~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~~l~el~  223 (290)
T cd05045         161 A-----------------EGRKMKISDFGLSRDVYEEDSYVKRSKGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIV  223 (290)
T ss_pred             c-----------------CCCcEEeccccccccccCccchhcccCCCCCccccCHHHHccCCcchHhHHHHHHHHHHHHH
Confidence            8                 67789999999986432211111112234566899999998888899999999999999999


Q ss_pred             h-CccccccccCCCCCcee-eecCcchhhhhHHHHHHHHHHHHhcCCCCCChHHHHHHHH
Q 018699          264 H-NSYMEIEKKASPDGGLV-YLPKLSFKRYWKVELWKSLFTNLLNMSSGNDKEVLQNLQK  321 (351)
Q Consensus       264 ~-g~~p~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~~  321 (351)
                      + |..||............ .......+...+ ..+.+++.+||+.+|++||++.+++..
T Consensus       224 t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~i~~cl~~~P~~Rp~~~~i~~~  282 (290)
T cd05045         224 TLGGNPYPGIAPERLFNLLKTGYRMERPENCS-EEMYNLMLTCWKQEPDKRPTFADISKE  282 (290)
T ss_pred             hcCCCCCCCCCHHHHHHHHhCCCCCCCCCCCC-HHHHHHHHHHccCCcccCCCHHHHHHH
Confidence            8 88888643322100000 001111223333 789999999999999999999999764

Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi

>cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases

Probab=100.00  E-value=5e-36  Score=266.94  Aligned_cols=249  Identities=18%  Similarity=0.200  Sum_probs=186.0

Q ss_pred             EEEEEEeeccCceEEEEEEecCCCCceEEEEecCCCCChH---HHHHHHHHhhhccccccccccceeeecccCeeEEEEE
Q 018699           50 YQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFPWE---FYMYRQLDQRISGRERSSFGFAHRIHLYSDYSILVCD  126 (351)
Q Consensus        50 Y~i~~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~~~e---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e  126 (351)
                      |++.+.||.|++|+||+|. +..+|..||+|++......+   .....++ ..+....+++++........++..|+++|
T Consensus         1 y~~~~~l~~g~~~~vy~~~-~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~-~~l~~l~~~~iv~~~~~~~~~~~~~iv~e   78 (283)
T cd07835           1 YQKVEKIGEGTYGVVYKAR-DKLTGEIVALKKIRLETEDEGVPSTAIREI-SLLKELNHPNIVRLLDVVHSENKLYLVFE   78 (283)
T ss_pred             CchheEecCCCCeEEEEEE-EcCCCCEEEEEEeecccccccchhHHHHHH-HHHHhcCCCCccCHhheeccCCeEEEEEe
Confidence            6788999999999999999 46678999999886543211   1122222 23344457788888888888899999999


Q ss_pred             ecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeeccCCCCCcccCCe
Q 018699          127 YLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSGPWQDQGL  206 (351)
Q Consensus       127 ~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~~~~~~~~~~~  206 (351)
                      |+ +++|.+++....  ...+++..++.++.|++.||.|||+++++|+||+|+||+++                 .++.+
T Consensus        79 ~~-~~~l~~~~~~~~--~~~~~~~~~~~~~~~i~~~L~~lH~~~~~H~dl~p~nil~~-----------------~~~~~  138 (283)
T cd07835          79 FL-DLDLKKYMDSSP--LTGLDPPLIKSYLYQLLQGIAYCHSHRVLHRDLKPQNLLID-----------------REGAL  138 (283)
T ss_pred             cc-CcCHHHHHhhCC--CCCCCHHHHHHHHHHHHHHHHHHHHCCeeCCCCCHHHEEEc-----------------CCCcE
Confidence            99 579999987632  13689999999999999999999999999999999999999                 67789


Q ss_pred             EEeecCCccccccCCCCccccccccCCCcccceeccC-CCCCccchHhHHHHHHHHHHhCccccccccCCCC--------
Q 018699          207 CLVDWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQEK-KPWKFQVDTYGLCAIVHMMLHNSYMEIEKKASPD--------  277 (351)
Q Consensus       207 ~l~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~~DiwslG~il~~l~~g~~p~~~~~~~~~--------  277 (351)
                      +|+|||.+......  ........++..|+|||.+.+ ..++.++|+||||+++|+|++|..||........        
T Consensus       139 ~l~df~~~~~~~~~--~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~  216 (283)
T cd07835         139 KLADFGLARAFGVP--VRTYTHEVVTLWYRAPEILLGSRQYSTPVDIWSIGCIFAEMVNRRPLFPGDSEIDQLFRIFRTL  216 (283)
T ss_pred             EEeecccccccCCC--ccccCccccccCCCCCceeecCcccCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHh
Confidence            99999988643211  112223356788999998765 4568899999999999999999999864322100        


Q ss_pred             ------------------Cceeee---cCcchhhhhHHHHHHHHHHHHhcCCCCCChHHHHHHHHHH
Q 018699          278 ------------------GGLVYL---PKLSFKRYWKVELWKSLFTNLLNMSSGNDKEVLQNLQKSF  323 (351)
Q Consensus       278 ------------------~~~~~~---~~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~~~~  323 (351)
                                        ......   .........+ ..+.++|.+||++||.+||++.+++.|+|
T Consensus       217 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~li~~~l~~~P~~Rpt~~~il~~~~  282 (283)
T cd07835         217 GTPDEDVWPGVTSLPDYKPTFPKWARQDLSKVVPNLD-EDGLDLLSKMLVYDPAKRISAKAALQHPY  282 (283)
T ss_pred             CCCChHHhhhhhhchhhhhhcccccccchhhhcCCCC-HHHHHHHHHHhcCChhhCcCHHHHhcCCC
Confidence                              000000   0000111122 67889999999999999999999999875

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc

>cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins

Probab=100.00  E-value=3.1e-36  Score=261.51  Aligned_cols=228  Identities=18%  Similarity=0.211  Sum_probs=178.4

Q ss_pred             cCceEEEEEEecCCCCceEEEEecCCCCChHHHHHHHHHhhhccccccccccceeeecccCeeEEEEEecCCCCHHHHHH
Q 018699           59 GGFAKVFKAYVNGDPEDVVALKIQKPAFPWEFYMYRQLDQRISGRERSSFGFAHRIHLYSDYSILVCDYLSQGTLQDAIN  138 (351)
Q Consensus        59 G~~g~V~~a~~~~~~~~~vaiK~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~  138 (351)
                      |.+|.||+|+ +..+++.||+|.+........+     ........++++..........+..++||||+++++|.+++.
T Consensus         4 g~~~~v~~~~-~~~~~~~~~~K~i~~~~~~~~~-----~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~   77 (237)
T cd05576           4 GVIDKVLLVM-DTRTQQTFILKGLRKSSEYSRE-----RLTIIPHCVPNMVCLHKYIVSEDSVFLVLQHAEGGKLWSHIS   77 (237)
T ss_pred             cccceEEEEE-EccCCcEEEEEeecchhhhhhH-----HHHHHhcCCCceeehhhheecCCeEEEEEecCCCCCHHHHHH
Confidence            8899999999 6788899999998765322111     122223346677777777777889999999999999999987


Q ss_pred             HHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeeccCCCCCcccCCeEEeecCCccccc
Q 018699          139 SYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSGPWQDQGLCLVDWGRGIDLH  218 (351)
Q Consensus       139 ~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~~~~~~~~~~~~l~Dfg~a~~~~  218 (351)
                      ..    ..+++..+..++.|++.|+.|||++||+|+||+|+||+++                 .++.++++|||.+....
T Consensus        78 ~~----~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~dlkp~Nil~~-----------------~~~~~~l~df~~~~~~~  136 (237)
T cd05576          78 KF----LNIPEECVKRWAAEMVVALDALHREGIVCRDLNPNNILLD-----------------DRGHIQLTYFSRWSEVE  136 (237)
T ss_pred             Hh----cCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEEc-----------------CCCCEEEecccchhccc
Confidence            63    5689999999999999999999999999999999999999                 67779999999765432


Q ss_pred             cCCCCccccccccCCCcccceeccCCCCCccchHhHHHHHHHHHHhCccccccccCCCCCceeeecCcchhhhhHHHHHH
Q 018699          219 LFPDNMEFEGDCRTSGFRCIEMQEKKPWKFQVDTYGLCAIVHMMLHNSYMEIEKKASPDGGLVYLPKLSFKRYWKVELWK  298 (351)
Q Consensus       219 ~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  298 (351)
                      .     ......++..|+|||...+..++.++|+||+|+++|+|++|..|+.........    ......|...+ +.++
T Consensus       137 ~-----~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~~~~~~~~~~~~----~~~~~~~~~~~-~~~~  206 (237)
T cd05576         137 D-----SCDGEAVENMYCAPEVGGISEETEACDWWSLGAILFELLTGKTLVECHPSGINT----HTTLNIPEWVS-EEAR  206 (237)
T ss_pred             c-----ccccCCcCccccCCcccCCCCCCchhhHHHHHHHHHHHHHCcchhhcCchhccc----ccccCCcccCC-HHHH
Confidence            1     122334567799999998888899999999999999999999887643221111    11122333344 7899


Q ss_pred             HHHHHHhcCCCCCChHH-----HHHHHHHH
Q 018699          299 SLFTNLLNMSSGNDKEV-----LQNLQKSF  323 (351)
Q Consensus       299 ~li~~~L~~dP~~R~s~-----~e~l~~~~  323 (351)
                      ++|.+||+.||++|+++     .+++.|||
T Consensus       207 ~li~~~l~~dp~~R~~~~~~~~~~~~~h~~  236 (237)
T cd05576         207 SLLQQLLQFNPTERLGAGVAGVEDIKSHPF  236 (237)
T ss_pred             HHHHHHccCCHHHhcCCCccchHHHHcCCC
Confidence            99999999999999986     88888876

Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha

>cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase

Probab=100.00  E-value=3.1e-36  Score=264.44  Aligned_cols=247  Identities=13%  Similarity=0.104  Sum_probs=183.5

Q ss_pred             EcCeeEEEEEEeeccCceEEEEEEecCCCCceEEEEecCCCCChHHHHHHHHHhhhccccccccccceeee-cccCeeEE
Q 018699           45 IGGKKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFPWEFYMYRQLDQRISGRERSSFGFAHRIH-LYSDYSIL  123 (351)
Q Consensus        45 i~~~~Y~i~~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l  123 (351)
                      +...+|++.+.||+|++|.||+|..   .+..||+|.+...... ..... .........++++....... ..++..++
T Consensus         3 ~~~~~~~~~~~lg~g~~~~v~~~~~---~~~~~~~k~~~~~~~~-~~~~~-e~~~l~~l~~~~i~~~~~~~~~~~~~~~l   77 (256)
T cd05082           3 LNMKELKLLQTIGKGEFGDVMLGDY---RGNKVAVKCIKNDATA-QAFLA-EASVMTQLRHSNLVQLLGVIVEEKGGLYI   77 (256)
T ss_pred             ccHHhCeeeeeecccCCCeEEEEEE---cCCcEEEEEeCCCchH-HHHHH-HHHHHHhCCCCCeeeEEEEEEcCCCceEE
Confidence            4567899999999999999999984   3677999998754322 11112 22233344566666666543 44567899


Q ss_pred             EEEecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeeccCCCCCccc
Q 018699          124 VCDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSGPWQD  203 (351)
Q Consensus       124 v~e~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~~~~~~~~  203 (351)
                      +|||+++++|.+++....  ...+++..+..++.|++.|+++||++|++|+||+|+||+++                 .+
T Consensus        78 v~e~~~~~~L~~~~~~~~--~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nil~~-----------------~~  138 (256)
T cd05082          78 VTEYMAKGSLVDYLRSRG--RSVLGGDCLLKFSLDVCEAMEYLEANNFVHRDLAARNVLVS-----------------ED  138 (256)
T ss_pred             EEECCCCCcHHHHHHhcC--CCCCCHHHHHHHHHHHHHHHHHHHhCCEeccccchheEEEc-----------------CC
Confidence            999999999999987642  23588999999999999999999999999999999999998                 67


Q ss_pred             CCeEEeecCCccccccCCCCccccccccCCCcccceeccCCCCCccchHhHHHHHHHHHHh-CccccccccCCCCCc-ee
Q 018699          204 QGLCLVDWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQEKKPWKFQVDTYGLCAIVHMMLH-NSYMEIEKKASPDGG-LV  281 (351)
Q Consensus       204 ~~~~l~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~-g~~p~~~~~~~~~~~-~~  281 (351)
                      +.++|+|||++......     .....++..|+|||.+.+..++.++|||||||++|+|++ |..||.......... ..
T Consensus       139 ~~~kl~dfg~~~~~~~~-----~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i~~~l~~~g~~p~~~~~~~~~~~~~~  213 (256)
T cd05082         139 NVAKVSDFGLTKEASST-----QDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVE  213 (256)
T ss_pred             CcEEecCCccceecccc-----CCCCccceeecCHHHHccCCCCchhhhHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHh
Confidence            78999999988643211     112234567999999988888999999999999999997 888886432210000 00


Q ss_pred             eecCcchhhhhHHHHHHHHHHHHhcCCCCCChHHHHHHHH
Q 018699          282 YLPKLSFKRYWKVELWKSLFTNLLNMSSGNDKEVLQNLQK  321 (351)
Q Consensus       282 ~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~~  321 (351)
                      .......+...+ ..+.++|.+||..+|++||++.+++..
T Consensus       214 ~~~~~~~~~~~~-~~~~~li~~~l~~~p~~Rpt~~~l~~~  252 (256)
T cd05082         214 KGYKMDAPDGCP-PVVYDVMKQCWHLDAATRPSFLQLREQ  252 (256)
T ss_pred             cCCCCCCCCCCC-HHHHHHHHHHhcCChhhCcCHHHHHHH
Confidence            001112222333 788999999999999999999999764

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re

>cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase

Probab=100.00  E-value=2.7e-36  Score=269.47  Aligned_cols=258  Identities=12%  Similarity=0.064  Sum_probs=188.2

Q ss_pred             cCeeEEEEEEeeccCceEEEEEEec----CCCCceEEEEecCCCCChHH-HHHHHHHhhhccccccccccceeeecccCe
Q 018699           46 GGKKYQIKGCAGQGGFAKVFKAYVN----GDPEDVVALKIQKPAFPWEF-YMYRQLDQRISGRERSSFGFAHRIHLYSDY  120 (351)
Q Consensus        46 ~~~~Y~i~~~lg~G~~g~V~~a~~~----~~~~~~vaiK~~~~~~~~e~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  120 (351)
                      ..++|++.+.||.|+||.||+|.+.    ..++..||+|++......+. ..+......+....|++++....+...++.
T Consensus         3 ~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~ei~~l~~l~h~~iv~~~~~~~~~~~   82 (288)
T cd05050           3 PRNNIEYVRDIGQGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDHPNIVKLLGVCAVGKP   82 (288)
T ss_pred             ChHhceecccccccccccEEEEEEcccCCCCcceeEEEEecCCCcCHHHHHHHHHHHHHHHhcCCCchheEEEEEcCCCc
Confidence            4578999999999999999999853    23678999999876543221 112222223344567788888888777888


Q ss_pred             eEEEEEecCCCCHHHHHHHHHh------------------hCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEE
Q 018699          121 SILVCDYLSQGTLQDAINSYVV------------------IGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLL  182 (351)
Q Consensus       121 ~~lv~e~~~~~sL~~~l~~~~~------------------~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nil  182 (351)
                      .++|+||+++++|.+++.....                  ....+++..++.++.|++.||.+||++|++|+||+|+||+
T Consensus        83 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~aL~~lH~~~i~H~dl~p~nil  162 (288)
T cd05050          83 MCLLFEYMAYGDLNEFLRHRSPRAQCSLSHSTSSARKCGLNPLPLSCTEQLCIAKQVAAGMAYLSERKFVHRDLATRNCL  162 (288)
T ss_pred             cEEEEecCCCCCHHHHHHHcCccccccccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhCCeecccccHhheE
Confidence            9999999999999999975310                  0124778889999999999999999999999999999999


Q ss_pred             EeecCCcceeeccCCCCCcccCCeEEeecCCccccccCCCCccccccccCCCcccceeccCCCCCccchHhHHHHHHHHH
Q 018699          183 IRYARDELTVLDHDRSGPWQDQGLCLVDWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQEKKPWKFQVDTYGLCAIVHMM  262 (351)
Q Consensus       183 l~~~~~~~~~~~~~~~~~~~~~~~~l~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~l  262 (351)
                      ++                 .++.++|+|||.+.................+..|+|||.+.+..++.++|||||||++|+|
T Consensus       163 ~~-----------------~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el  225 (288)
T cd05050         163 VG-----------------ENMVVKIADFGLSRNIYSADYYKASENDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEI  225 (288)
T ss_pred             ec-----------------CCCceEECccccceecccCccccccCCCccChhhcCHHHHhcCCCCchhHHHHHHHHHHHH
Confidence            98                 6778999999987643211111111222345679999999888899999999999999999


Q ss_pred             Hh-CccccccccCCCCCceee-ecCcchhhhhHHHHHHHHHHHHhcCCCCCChHHHHHHHH
Q 018699          263 LH-NSYMEIEKKASPDGGLVY-LPKLSFKRYWKVELWKSLFTNLLNMSSGNDKEVLQNLQK  321 (351)
Q Consensus       263 ~~-g~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~~  321 (351)
                      ++ |..||............. ......+...+ ..+.+||.+||+.||++||++.|++..
T Consensus       226 ~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~-~~l~~li~~~l~~~p~~Rpt~~el~~~  285 (288)
T cd05050         226 FSYGMQPYYGMAHEEVIYYVRDGNVLSCPDNCP-LELYNLMRLCWSKLPSDRPSFASINRI  285 (288)
T ss_pred             HhCCCCCCCCCCHHHHHHHHhcCCCCCCCCCCC-HHHHHHHHHHcccCcccCCCHHHHHHH
Confidence            97 777875432211000000 00111122223 678999999999999999999998753

Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M

>cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5

Probab=100.00  E-value=2.5e-36  Score=264.92  Aligned_cols=252  Identities=16%  Similarity=0.146  Sum_probs=190.5

Q ss_pred             eEEEEEEeeccCceEEEEEEecCCCCceEEEEecCCCCC--hHHHHHHHHHhhhccccccccccceeeecccCeeEEEEE
Q 018699           49 KYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFP--WEFYMYRQLDQRISGRERSSFGFAHRIHLYSDYSILVCD  126 (351)
Q Consensus        49 ~Y~i~~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~~--~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e  126 (351)
                      +|++.+.||.|++|.||+|. ...++..||+|.+.....  .+...+...........++++..........+..++|+|
T Consensus         1 ~~~~~~~l~~g~~~~v~~~~-~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e   79 (257)
T cd08225           1 RYEIIKKIGEGSFGKIYLAK-AKSDSEHCVIKEIDLTKMPVKEKEASKKEVILLAKMKHPNIVTFFASFQENGRLFIVME   79 (257)
T ss_pred             CceEEEEecCCCcceEEEEE-EcCCCceEEEEEeeHhhccchhhHHHHHHHHHHHhCCCCChhhhhheeccCCeEEEEEe
Confidence            58999999999999999999 567788999999865321  111222222233444567788888877778889999999


Q ss_pred             ecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeeccCCCCCccc-CC
Q 018699          127 YLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSGPWQD-QG  205 (351)
Q Consensus       127 ~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~~~~~~~~-~~  205 (351)
                      |+++++|.+++....  +..+++..+..++.|++.|+.|||+.+++|+||+|+||+++                 .+ ..
T Consensus        80 ~~~~~~L~~~~~~~~--~~~~~~~~~~~~~~~l~~~l~~lh~~~i~H~dl~~~nil~~-----------------~~~~~  140 (257)
T cd08225          80 YCDGGDLMKRINRQR--GVLFSEDQILSWFVQISLGLKHIHDRKILHRDIKSQNIFLS-----------------KNGMV  140 (257)
T ss_pred             cCCCCcHHHHHHhcc--CCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCHHHEEEc-----------------CCCCe
Confidence            999999999987642  33578999999999999999999999999999999999998                 33 34


Q ss_pred             eEEeecCCccccccCCCCccccccccCCCcccceeccCCCCCccchHhHHHHHHHHHHhCccccccccCCCCCce-eeec
Q 018699          206 LCLVDWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQEKKPWKFQVDTYGLCAIVHMMLHNSYMEIEKKASPDGGL-VYLP  284 (351)
Q Consensus       206 ~~l~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~p~~~~~~~~~~~~-~~~~  284 (351)
                      ++|+|||.+.....  .........|++.|+|||.+.+..++.++|+||+|++++++++|..||........... ....
T Consensus       141 ~~l~d~~~~~~~~~--~~~~~~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~  218 (257)
T cd08225         141 AKLGDFGIARQLND--SMELAYTCVGTPYYLSPEICQNRPYNNKTDIWSLGCVLYELCTLKHPFEGNNLHQLVLKICQGY  218 (257)
T ss_pred             EEecccccchhccC--CcccccccCCCccccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCccHHHHHHHHhccc
Confidence            69999998864321  11122234578899999999888889999999999999999999999864332100000 0000


Q ss_pred             CcchhhhhHHHHHHHHHHHHhcCCCCCChHHHHHHHHHH
Q 018699          285 KLSFKRYWKVELWKSLFTNLLNMSSGNDKEVLQNLQKSF  323 (351)
Q Consensus       285 ~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~~~~  323 (351)
                      ....+...+ ..++++|.+||..+|++||++.+++.|+|
T Consensus       219 ~~~~~~~~~-~~~~~~i~~~l~~~p~~Rpt~~~ll~~~~  256 (257)
T cd08225         219 FAPISPNFS-RDLRSLISQLFKVSPRDRPSITSILKRPF  256 (257)
T ss_pred             CCCCCCCCC-HHHHHHHHHHhccChhhCcCHHHHhhCCC
Confidence            111112223 67999999999999999999999999986

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown.

>cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10

Probab=100.00  E-value=4.1e-36  Score=265.54  Aligned_cols=252  Identities=17%  Similarity=0.208  Sum_probs=190.6

Q ss_pred             eEEEEEEeeccCceEEEEEEecCCCCceEEEEecCCCCC--------hHH---HHHHHHHhhhccccccccccceeeecc
Q 018699           49 KYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFP--------WEF---YMYRQLDQRISGRERSSFGFAHRIHLY  117 (351)
Q Consensus        49 ~Y~i~~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~~--------~e~---~~~~~~~~~~~~~~~~~~~~~~~~~~~  117 (351)
                      .|++.+.||+|+||.||.|.+...+++.+|+|.+.....        .+.   ....++........++++......+..
T Consensus         1 ~y~~~~~ig~G~~~~v~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~   80 (269)
T cd08528           1 EYAVLEHLGSGAFGCVYKVRKKNNGQNLLALKEINVHNPAFGKDKRERDKSIGDIVSEVTIIKEQLRHPNIVRYYKTFLE   80 (269)
T ss_pred             CchhhhhhcCCCCceEEEEEEcCCCCceeeeeEeeccccccccccccchHHHHHHHHHHHHHhhcCCCCCeeeEEeeEcc
Confidence            388999999999999999996554788999998753211        111   112222222223567888888888888


Q ss_pred             cCeeEEEEEecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHH-CCceecCCCCCcEEEeecCCcceeeccC
Q 018699          118 SDYSILVCDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHD-VGIIHGDFKPDNLLIRYARDELTVLDHD  196 (351)
Q Consensus       118 ~~~~~lv~e~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~-~~i~H~dl~p~Nill~~~~~~~~~~~~~  196 (351)
                      ++..++||||+++++|.+++......+..+++..++.++.|++.|+.+||+ .|++|+||+|+||+++            
T Consensus        81 ~~~~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~i~H~dl~~~nil~~------------  148 (269)
T cd08528          81 NDRLYIVMDLIEGAPLGEHFNSLKEKKQRFTEERIWNIFVQMVLALRYLHKEKRIVHRDLTPNNIMLG------------  148 (269)
T ss_pred             CCeEEEEEecCCCCcHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHhccCCceeecCCCHHHEEEC------------
Confidence            899999999999999999987644335678999999999999999999996 6899999999999998            


Q ss_pred             CCCCcccCCeEEeecCCccccccCCCCccccccccCCCcccceeccCCCCCccchHhHHHHHHHHHHhCccccccccCCC
Q 018699          197 RSGPWQDQGLCLVDWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQEKKPWKFQVDTYGLCAIVHMMLHNSYMEIEKKASP  276 (351)
Q Consensus       197 ~~~~~~~~~~~l~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~p~~~~~~~~  276 (351)
                           .++.++|+|||.+.....   ........++..|+|||.+.+..++.++|+||||+++|+|++|..||.......
T Consensus       149 -----~~~~~~l~dfg~~~~~~~---~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~ll~~l~~g~~p~~~~~~~~  220 (269)
T cd08528         149 -----EDDKVTITDFGLAKQKQP---ESKLTSVVGTILYSCPEIVKNEPYGEKADVWAFGCILYQMCTLQPPFYSTNMLS  220 (269)
T ss_pred             -----CCCcEEEecccceeeccc---ccccccccCcccCcChhhhcCCCCchHHHHHHHHHHHHHHHhCCCcccccCHHH
Confidence                 777899999999865332   113344567889999999988888999999999999999999999986543210


Q ss_pred             CCce-eeecCcchhh-hhHHHHHHHHHHHHhcCCCCCChHHHHHHHH
Q 018699          277 DGGL-VYLPKLSFKR-YWKVELWKSLFTNLLNMSSGNDKEVLQNLQK  321 (351)
Q Consensus       277 ~~~~-~~~~~~~~~~-~~~~~~~~~li~~~L~~dP~~R~s~~e~l~~  321 (351)
                      .... ......+.+. .++ ..+.++|.+||..||++||++.|+..+
T Consensus       221 ~~~~~~~~~~~~~~~~~~~-~~l~~li~~cl~~~p~~Rp~~~e~~~~  266 (269)
T cd08528         221 LATKIVEAVYEPLPEGMYS-EDVTDVITSCLTPDAEARPDIIQVSAM  266 (269)
T ss_pred             HHHHHhhccCCcCCcccCC-HHHHHHHHHHCCCCCccCCCHHHHHHH
Confidence            0000 0000011111 233 789999999999999999999998764

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24.

>cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase

Probab=100.00  E-value=6e-36  Score=262.65  Aligned_cols=247  Identities=13%  Similarity=0.022  Sum_probs=183.8

Q ss_pred             EEeeccCceEEEEEEecCCCCc--eEEEEecCCCCC-hHHHHHHHHHhhhccccccccccceeeecccCeeEEEEEecCC
Q 018699           54 GCAGQGGFAKVFKAYVNGDPED--VVALKIQKPAFP-WEFYMYRQLDQRISGRERSSFGFAHRIHLYSDYSILVCDYLSQ  130 (351)
Q Consensus        54 ~~lg~G~~g~V~~a~~~~~~~~--~vaiK~~~~~~~-~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~  130 (351)
                      +.||+|++|.||+|.+....++  .||+|.+..... .....+......+....|++++........ ...++||||+++
T Consensus         1 ~~ig~g~~~~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~-~~~~~v~e~~~~   79 (257)
T cd05040           1 KKLGDGSFGVVRRGEWSTSGGKVIPVAVKCLKSDKLSDIMDDFLKEAAIMHSLDHENLIRLYGVVLT-HPLMMVTELAPL   79 (257)
T ss_pred             CcCCccCcccEEeeeEecCCCCceEEEEeecCCcccHHHHHHHHHHHHHHhhcCCCCccceeEEEcC-CeEEEEEEecCC
Confidence            4689999999999997443333  699999887655 222222222334455567788887777666 888999999999


Q ss_pred             CCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeeccCCCCCcccCCeEEee
Q 018699          131 GTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSGPWQDQGLCLVD  210 (351)
Q Consensus       131 ~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~~~~~~~~~~~~l~D  210 (351)
                      ++|.+++....  ...+++..++.++.|++.||.+||++|++|+||+|+||+++                 .++.++|+|
T Consensus        80 ~~L~~~l~~~~--~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~di~p~nil~~-----------------~~~~~kl~d  140 (257)
T cd05040          80 GSLLDRLRKDA--LGHFLISTLCDYAVQIANGMRYLESKRFIHRDLAARNILLA-----------------SDDKVKIGD  140 (257)
T ss_pred             CcHHHHHHhcc--cccCcHHHHHHHHHHHHHHHHHHHhCCccccccCcccEEEe-----------------cCCEEEecc
Confidence            99999998742  14689999999999999999999999999999999999999                 677899999


Q ss_pred             cCCccccccCCCCc-cccccccCCCcccceeccCCCCCccchHhHHHHHHHHHHh-CccccccccCCCCCce--eeecCc
Q 018699          211 WGRGIDLHLFPDNM-EFEGDCRTSGFRCIEMQEKKPWKFQVDTYGLCAIVHMMLH-NSYMEIEKKASPDGGL--VYLPKL  286 (351)
Q Consensus       211 fg~a~~~~~~~~~~-~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~-g~~p~~~~~~~~~~~~--~~~~~~  286 (351)
                      ||++.......... ......++..|+|||.+.+..++.++|||||||++|+|++ |..||...........  ......
T Consensus       141 fg~~~~~~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~~~~~~~~~  220 (257)
T cd05040         141 FGLMRALPQNEDHYVMEEHLKVPFAWCAPESLRTRTFSHASDVWMFGVTLWEMFTYGEEPWAGLSGSQILKKIDKEGERL  220 (257)
T ss_pred             ccccccccccccceecccCCCCCceecCHHHhcccCcCchhhhHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhcCCcC
Confidence            99886543211111 1112346678999999988889999999999999999998 9999853322100000  001111


Q ss_pred             chhhhhHHHHHHHHHHHHhcCCCCCChHHHHHHHH
Q 018699          287 SFKRYWKVELWKSLFTNLLNMSSGNDKEVLQNLQK  321 (351)
Q Consensus       287 ~~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~~  321 (351)
                      ..+...+ ..+.+++.+||+.+|++||++.+++..
T Consensus       221 ~~~~~~~-~~~~~li~~~l~~~p~~Rps~~~~~~~  254 (257)
T cd05040         221 ERPEACP-QDIYNVMLQCWAHNPADRPTFAALREF  254 (257)
T ss_pred             CCCccCC-HHHHHHHHHHCCCCcccCCCHHHHHHH
Confidence            1222233 778999999999999999999999764

Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and

>cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1

Probab=100.00  E-value=1.3e-35  Score=268.72  Aligned_cols=248  Identities=17%  Similarity=0.129  Sum_probs=188.7

Q ss_pred             eeEEEEEEeeccCceEEEEEEecCCCCceEEEEecCCCCChHHHH---HHHHHhhhccccccccccceeeecccCeeEEE
Q 018699           48 KKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFPWEFYM---YRQLDQRISGRERSSFGFAHRIHLYSDYSILV  124 (351)
Q Consensus        48 ~~Y~i~~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~~~e~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv  124 (351)
                      ..|...+.||+|+||.||+|+ +..++..||+|.+..........   +......+....+++++........+...++|
T Consensus        25 ~~f~~~~~lg~G~~~~v~~~~-~~~~~~~valK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv  103 (317)
T cd06635          25 KLFTDLREIGHGSFGAVYFAR-DVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVKFLQRIKHPNSIEYKGCYLREHTAWLV  103 (317)
T ss_pred             hhhhhhheeccCCCeEEEEEE-EcCCCcEEEEEEEecCCCCchHHHHHHHHHHHHHHhCCCCCEEEEEEEEeeCCeEEEE
Confidence            458899999999999999999 46678999999987543222121   11112234455677888888877778889999


Q ss_pred             EEecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeeccCCCCCcccC
Q 018699          125 CDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSGPWQDQ  204 (351)
Q Consensus       125 ~e~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~~~~~~~~~  204 (351)
                      |||+. |+|.+.+...   +.++++..+..++.|++.|+.|||++||+|+||+|+||+++                 .++
T Consensus       104 ~e~~~-g~l~~~~~~~---~~~l~~~~~~~i~~~i~~~l~~lH~~~i~H~dL~p~Nil~~-----------------~~~  162 (317)
T cd06635         104 MEYCL-GSASDLLEVH---KKPLQEVEIAAITHGALQGLAYLHSHNMIHRDIKAGNILLT-----------------EPG  162 (317)
T ss_pred             EeCCC-CCHHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCcccEEEC-----------------CCC
Confidence            99995 5888777654   46789999999999999999999999999999999999998                 677


Q ss_pred             CeEEeecCCccccccCCCCccccccccCCCcccceecc---CCCCCccchHhHHHHHHHHHHhCccccccccCCCCC-ce
Q 018699          205 GLCLVDWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQE---KKPWKFQVDTYGLCAIVHMMLHNSYMEIEKKASPDG-GL  280 (351)
Q Consensus       205 ~~~l~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~---~~~~~~~~DiwslG~il~~l~~g~~p~~~~~~~~~~-~~  280 (351)
                      .++|+|||++....      ......++..|+|||.+.   +..++.++|+||+||++|+|++|..||......... ..
T Consensus       163 ~~kl~dfg~~~~~~------~~~~~~~~~~y~aPE~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~~~~~~  236 (317)
T cd06635         163 QVKLADFGSASIAS------PANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHI  236 (317)
T ss_pred             CEEEecCCCccccC------CcccccCCccccChhhhhcCCCCCCCccccHHHHHHHHHHHHhCCCCCCCccHHHHHHHH
Confidence            89999999875322      122345788999999973   456789999999999999999999998654321100 00


Q ss_pred             eee-cCcchhhhhHHHHHHHHHHHHhcCCCCCChHHHHHHHHHHH
Q 018699          281 VYL-PKLSFKRYWKVELWKSLFTNLLNMSSGNDKEVLQNLQKSFQ  324 (351)
Q Consensus       281 ~~~-~~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~~~~~  324 (351)
                      ... .....+..++ +.+++||.+||+.+|.+||++.++++|+|.
T Consensus       237 ~~~~~~~~~~~~~~-~~l~~li~~~l~~~p~~Rpt~~~il~~~~~  280 (317)
T cd06635         237 AQNESPTLQSNEWS-DYFRNFVDSCLQKIPQDRPTSEELLKHMFV  280 (317)
T ss_pred             HhccCCCCCCcccc-HHHHHHHHHHccCCcccCcCHHHHHhChhh
Confidence            000 1111122344 779999999999999999999999999874

Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron

>cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta

Probab=100.00  E-value=6.8e-36  Score=271.88  Aligned_cols=252  Identities=13%  Similarity=0.111  Sum_probs=184.0

Q ss_pred             EEeecc--CceEEEEEEecCCCCceEEEEecCCCCChH--HHHHHHHHhhhccccccccccceeeecccCeeEEEEEecC
Q 018699           54 GCAGQG--GFAKVFKAYVNGDPEDVVALKIQKPAFPWE--FYMYRQLDQRISGRERSSFGFAHRIHLYSDYSILVCDYLS  129 (351)
Q Consensus        54 ~~lg~G--~~g~V~~a~~~~~~~~~vaiK~~~~~~~~e--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~  129 (351)
                      ..||+|  ++|+||+|+ +..+|+.||+|+........  .+.+...........|++++..+.++..++..++|+||+.
T Consensus         4 ~~ig~g~~~~~~v~~a~-~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~~~~~~~v~e~~~   82 (328)
T cd08226           4 VEIGRGFCNLTSVYLAR-HTPTGTLVTVRITDLENCTEEHLKALQNEVVLSHFFRHPNIMTSWTVFTTGSWLWVISPFMA   82 (328)
T ss_pred             HHhCCcccCceeEEEEE-EcCCCcEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcceEeeeEecCCceEEEEeccc
Confidence            456666  999999999 57789999999987543322  2222222233344568899898888888899999999999


Q ss_pred             CCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeeccCCCCCcccCCeEEe
Q 018699          130 QGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSGPWQDQGLCLV  209 (351)
Q Consensus       130 ~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~~~~~~~~~~~~l~  209 (351)
                      +++|.+++....  ...+++..+..++.|++.||+|||+.|++|+||||+||+++                 .++.++++
T Consensus        83 ~~~l~~~l~~~~--~~~~~~~~~~~~~~qi~~aL~~lH~~~ivHrDlkp~Nill~-----------------~~~~~~~~  143 (328)
T cd08226          83 YGSANSLLKTYF--PEGMSEALIGNILFGALRGLNYLHQNGYIHRNIKASHILIS-----------------GDGLVSLS  143 (328)
T ss_pred             CCCHHHHHHhhc--ccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEe-----------------CCCcEEEe
Confidence            999999988743  23588999999999999999999999999999999999999                 66779999


Q ss_pred             ecCCccccccCCCCc-c----ccccccCCCcccceeccCC--CCCccchHhHHHHHHHHHHhCccccccccCCCC-----
Q 018699          210 DWGRGIDLHLFPDNM-E----FEGDCRTSGFRCIEMQEKK--PWKFQVDTYGLCAIVHMMLHNSYMEIEKKASPD-----  277 (351)
Q Consensus       210 Dfg~a~~~~~~~~~~-~----~~~~~g~~~y~aPE~~~~~--~~~~~~DiwslG~il~~l~~g~~p~~~~~~~~~-----  277 (351)
                      ||+.+.......... .    .....++..|+|||.+.+.  .++.++||||+||++|+|++|..||........     
T Consensus       144 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~~l~el~~g~~p~~~~~~~~~~~~~~  223 (328)
T cd08226         144 GLSHLYSLVRNGQKAKVVYDFPQFSTSVLPWLSPELLRQDLYGYNVKSDIYSVGITACELATGRVPFQDMLRTQMLLQKL  223 (328)
T ss_pred             chHHHhhhhccCccccccccccccccCccCccChhhhcCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCcChHHHHHHHh
Confidence            997543211110000 0    0111245679999998763  468999999999999999999999864321000     


Q ss_pred             -Cc---------------------------------------ee--eecCcchhhhhHHHHHHHHHHHHhcCCCCCChHH
Q 018699          278 -GG---------------------------------------LV--YLPKLSFKRYWKVELWKSLFTNLLNMSSGNDKEV  315 (351)
Q Consensus       278 -~~---------------------------------------~~--~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~  315 (351)
                       ..                                       ..  .....+.+..++ +.+.+||++||..||++|||+
T Consensus       224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~li~~~l~~dP~~Rpta  302 (328)
T cd08226         224 KGPPYSPLDITTFPCEESRMKNSQSGVDSGIGESVVAAGMTQTMTSERLRTPSSKTFS-PAFQNLVELCLQQDPEKRPSA  302 (328)
T ss_pred             cCCCCCCccccccchhhhhhccchhhhhcccccchhccccccccccccccchhhhhhh-HHHHHHHHHHccCCcccCCCH
Confidence             00                                       00  000011122234 678999999999999999999


Q ss_pred             HHHHHHHHHHH
Q 018699          316 LQNLQKSFQDY  326 (351)
Q Consensus       316 ~e~l~~~~~~~  326 (351)
                      .++++|+|...
T Consensus       303 ~e~l~~~~~~~  313 (328)
T cd08226         303 SSLLSHAFFKQ  313 (328)
T ss_pred             HHHhhCHHHHH
Confidence            99999987543

Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig

>cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11

Probab=100.00  E-value=3.4e-36  Score=264.73  Aligned_cols=252  Identities=17%  Similarity=0.155  Sum_probs=188.8

Q ss_pred             eEEEEEEeeccCceEEEEEEecCCCCceEEEEecCCCCC------hHHHHHHHHHhhhccccccccccceeeecccCeeE
Q 018699           49 KYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFP------WEFYMYRQLDQRISGRERSSFGFAHRIHLYSDYSI  122 (351)
Q Consensus        49 ~Y~i~~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~~------~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  122 (351)
                      +|.+.+.||+|++|.||+|++ ...+..+++|+......      .......+ ........|+++.............+
T Consensus         1 ~y~i~~~ig~g~~g~v~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e-~~~l~~l~h~~i~~~~~~~~~~~~~~   78 (260)
T cd08222           1 RYILQQRLGKGSFGTVYLVKD-KKAVAEERLKVLKEIPVGELNPNETVQANQE-AQLLSKLDHPAIVKFHASFLERDAFC   78 (260)
T ss_pred             CceeeeeecCCCCceEEEEEe-cCCCCcceEEEeccccccccCcchHHHHHHH-HHHHHhCCCCcHHHHHHHHhcCCceE
Confidence            699999999999999999994 45555566666443111      11111112 22344556778877777777778899


Q ss_pred             EEEEecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeeccCCCCCcc
Q 018699          123 LVCDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSGPWQ  202 (351)
Q Consensus       123 lv~e~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~~~~~~~  202 (351)
                      +|+||+++++|.+++......+..+++..++.++.|++.|+.|||+.|++|+||+|+||+++                 .
T Consensus        79 lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~h~~l~~~nili~-----------------~  141 (260)
T cd08222          79 IITEYCEGRDLDCKLEELKHTGKTLSENQVCEWFIQLLLGVHYMHQRRILHRDLKAKNIFLK-----------------N  141 (260)
T ss_pred             EEEEeCCCCCHHHHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCChhheEee-----------------c
Confidence            99999999999999876544456799999999999999999999999999999999999997                 2


Q ss_pred             cCCeEEeecCCccccccCCCCccccccccCCCcccceeccCCCCCccchHhHHHHHHHHHHhCccccccccCCCCCce-e
Q 018699          203 DQGLCLVDWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQEKKPWKFQVDTYGLCAIVHMMLHNSYMEIEKKASPDGGL-V  281 (351)
Q Consensus       203 ~~~~~l~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~p~~~~~~~~~~~~-~  281 (351)
                       +.++|+|||.+.....  .........+++.|+|||.+.+..++.++|+||+|+++|+|++|..||........... .
T Consensus       142 -~~~~l~d~g~~~~~~~--~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~~~~~~~~~~~~~~~~~~~~  218 (260)
T cd08222         142 -NLLKIGDFGVSRLLMG--SCDLATTFTGTPYYMSPEALKHQGYDSKSDIWSLGCILYEMCCLAHAFEGQNFLSVVLRIV  218 (260)
T ss_pred             -CCEeecccCceeecCC--CcccccCCCCCcCccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCccHHHHHHHHH
Confidence             3489999998754321  11222344578899999999888888999999999999999999999864322110000 0


Q ss_pred             eecCcchhhhhHHHHHHHHHHHHhcCCCCCChHHHHHHHHHH
Q 018699          282 YLPKLSFKRYWKVELWKSLFTNLLNMSSGNDKEVLQNLQKSF  323 (351)
Q Consensus       282 ~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~~~~  323 (351)
                      .......+...+ ..+.++|.+||..||++||++.++++|||
T Consensus       219 ~~~~~~~~~~~~-~~~~~li~~~l~~~p~~Rp~~~~il~~~~  259 (260)
T cd08222         219 EGPTPSLPETYS-RQLNSIMQSMLNKDPSLRPSAAEILRNPF  259 (260)
T ss_pred             cCCCCCCcchhc-HHHHHHHHHHhcCChhhCcCHHHHhhCCC
Confidence            112222333444 78899999999999999999999999986

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check

>cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85

Probab=100.00  E-value=8.9e-36  Score=265.41  Aligned_cols=251  Identities=18%  Similarity=0.224  Sum_probs=187.7

Q ss_pred             eEEEEEEeeccCceEEEEEEecCCCCceEEEEecCCCCCh--HHHHHHHHHhhhccccccccccceeeecccCeeEEEEE
Q 018699           49 KYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFPW--EFYMYRQLDQRISGRERSSFGFAHRIHLYSDYSILVCD  126 (351)
Q Consensus        49 ~Y~i~~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~~~--e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e  126 (351)
                      +|++.+.||.|++|.||+|+ +..+|+.||||.+......  ......+ ........++++......+...+..++|||
T Consensus         1 ~y~~~~~l~~g~~~~v~~~~-~~~~~~~~~iK~~~~~~~~~~~~~~~~E-~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e   78 (284)
T cd07836           1 NFKQLEKLGEGTYATVYKGR-NRTTGEIVALKEIHLDAEEGTPSTAIRE-ISLMKELKHENIVRLHDVIHTENKLMLVFE   78 (284)
T ss_pred             CceEeeeeccCCceEEEEEE-ECCCCeEEEEEEecccccccchHHHHHH-HHHHHhhcCCCEeeeeeeEeeCCcEEEEEe
Confidence            58999999999999999999 5677899999988754321  1112222 223334467788888888888889999999


Q ss_pred             ecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeeccCCCCCcccCCe
Q 018699          127 YLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSGPWQDQGL  206 (351)
Q Consensus       127 ~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~~~~~~~~~~~  206 (351)
                      |++ ++|.+++..... ...+++..+..++.|++.|+.|||+.|++|+||+|+||+++                 +++.+
T Consensus        79 ~~~-~~l~~~~~~~~~-~~~~~~~~~~~~~~qi~~~l~~lH~~~i~h~dl~p~ni~~~-----------------~~~~~  139 (284)
T cd07836          79 YMD-KDLKKYMDTHGV-RGALDPNTVKSFTYQLLKGIAFCHENRVLHRDLKPQNLLIN-----------------KRGEL  139 (284)
T ss_pred             cCC-ccHHHHHHhcCC-CCCcCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHHEEEC-----------------CCCcE
Confidence            996 589888876421 24689999999999999999999999999999999999998                 67789


Q ss_pred             EEeecCCccccccCCCCccccccccCCCcccceeccC-CCCCccchHhHHHHHHHHHHhCccccccccCCCC--------
Q 018699          207 CLVDWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQEK-KPWKFQVDTYGLCAIVHMMLHNSYMEIEKKASPD--------  277 (351)
Q Consensus       207 ~l~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~~DiwslG~il~~l~~g~~p~~~~~~~~~--------  277 (351)
                      +|+|||.+......  ........++..|++||.+.+ ..++.++|+|||||++|+|++|..||........        
T Consensus       140 ~l~d~g~~~~~~~~--~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~  217 (284)
T cd07836         140 KLADFGLARAFGIP--VNTFSNEVVTLWYRAPDVLLGSRTYSTSIDIWSVGCIMAEMITGRPLFPGTNNEDQLLKIFRIM  217 (284)
T ss_pred             EEeecchhhhhcCC--ccccccccccccccChHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHh
Confidence            99999988643211  112233456888999998865 4568899999999999999999999864432100        


Q ss_pred             --------------Cceeee-cC------cchhhhhHHHHHHHHHHHHhcCCCCCChHHHHHHHHHH
Q 018699          278 --------------GGLVYL-PK------LSFKRYWKVELWKSLFTNLLNMSSGNDKEVLQNLQKSF  323 (351)
Q Consensus       278 --------------~~~~~~-~~------~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~~~~  323 (351)
                                    ..+... +.      ..+....+ ..++++|.+||+.||.+||++.++++|+|
T Consensus       218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~i~~~l~~~p~~R~~~~~~l~~~~  283 (284)
T cd07836         218 GTPTESTWPGISQLPEYKPTFPRYPPQDLQQLFPHAD-PLGIDLLHRLLQLNPELRISAHDALQHPW  283 (284)
T ss_pred             CCCChhhHHHHhcCchhcccccCCChHHHHHHhhhcC-cHHHHHHHHHhcCCcccCCCHHHHhcCCC
Confidence                          000000 00      00001112 67889999999999999999999999876

Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment.

>cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein

Probab=100.00  E-value=1.8e-35  Score=267.43  Aligned_cols=254  Identities=13%  Similarity=0.108  Sum_probs=182.7

Q ss_pred             EEEEeeccCceEEEEEEecCCCCceEEEEecCCCCCh--HHHHHHHHHhhhccccccccccceeeecccCeeEEEEEecC
Q 018699           52 IKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFPW--EFYMYRQLDQRISGRERSSFGFAHRIHLYSDYSILVCDYLS  129 (351)
Q Consensus        52 i~~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~~~--e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~  129 (351)
                      +.+.+|.|  +.||.++ ...+++.||+|++......  ...........+....|+++......+...+..+++|||++
T Consensus         6 i~~~~~~~--~~v~~~~-~~~~~~~~avK~~~~~~~~~~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~e~~~   82 (314)
T cd08216           6 IGKCFEDL--MIVHLAK-HKPTNTLVAVKKINLDSCSKEDLKLLQQEIITSRQLQHPNILPYVTSFIVDSELYVVSPLMA   82 (314)
T ss_pred             hhHhhcCC--ceEEEEE-ecCCCCEEEEEEEeccccchhHHHHHHHHHHHHHhcCCcchhhhhheeecCCeEEEEEeccC
Confidence            34444444  5556665 3457899999998765221  22222222233344567788888888888889999999999


Q ss_pred             CCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeeccCCCCCcccCCeEEe
Q 018699          130 QGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSGPWQDQGLCLV  209 (351)
Q Consensus       130 ~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~~~~~~~~~~~~l~  209 (351)
                      +++|.+++....  +..+++..+..++.|++.||.|||+++|+|+||+|+||+++                 .++.++|+
T Consensus        83 ~~~l~~~l~~~~--~~~~~~~~~~~~~~~l~~~L~~LH~~~ivH~dlk~~Nili~-----------------~~~~~kl~  143 (314)
T cd08216          83 YGSCEDLLKTHF--PEGLPELAIAFILKDVLNALDYIHSKGFIHRSVKASHILLS-----------------GDGKVVLS  143 (314)
T ss_pred             CCCHHHHHHHhc--ccCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCcceEEEe-----------------cCCceEEe
Confidence            999999998643  35688999999999999999999999999999999999999                 67789999


Q ss_pred             ecCCccccccCCC-----CccccccccCCCcccceeccC--CCCCccchHhHHHHHHHHHHhCccccccccCCC------
Q 018699          210 DWGRGIDLHLFPD-----NMEFEGDCRTSGFRCIEMQEK--KPWKFQVDTYGLCAIVHMMLHNSYMEIEKKASP------  276 (351)
Q Consensus       210 Dfg~a~~~~~~~~-----~~~~~~~~g~~~y~aPE~~~~--~~~~~~~DiwslG~il~~l~~g~~p~~~~~~~~------  276 (351)
                      |||.+........     ........++..|+|||.+.+  ..++.++|+||+||++|+|++|..||.......      
T Consensus       144 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Diws~G~il~el~~g~~pf~~~~~~~~~~~~~  223 (314)
T cd08216         144 GLRYSVSMIKHGKRQRVVHDFPKSSVKNLPWLSPEVLQQNLQGYNEKSDIYSVGITACELANGHVPFKDMPATQMLLEKV  223 (314)
T ss_pred             cCccceeeccccccccccccccccccccccccCHHHhcCCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHH
Confidence            9998754321111     011123346778999999865  457899999999999999999999986432110      


Q ss_pred             C----------------------------CceeeecCcchhhhhHHHHHHHHHHHHhcCCCCCChHHHHHHHHHHHHHHh
Q 018699          277 D----------------------------GGLVYLPKLSFKRYWKVELWKSLFTNLLNMSSGNDKEVLQNLQKSFQDYLC  328 (351)
Q Consensus       277 ~----------------------------~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~~~~~~~~~  328 (351)
                      .                            ...........+..++ ..+.+||.+||..||++||++.++|.|||...+.
T Consensus       224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~li~~~l~~~P~~Rpt~~~ll~~p~~~~~~  302 (314)
T cd08216         224 RGTVPCLLDKSTYPLYEDSMSQSRSSNEHPNNRDSVDHPYTRTFS-EHFHQFVELCLQRDPESRPSASQLLNHSFFKQCK  302 (314)
T ss_pred             hccCccccccCchhhhcCCcCcccccccccchhhhhhcchhhHHH-HHHHHHHHHHhhcCCCcCcCHHHHhcCchHhhhc
Confidence            0                            0000011112223334 6789999999999999999999999999866444

Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc

>cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa

Probab=100.00  E-value=9.3e-36  Score=261.65  Aligned_cols=245  Identities=11%  Similarity=0.034  Sum_probs=178.2

Q ss_pred             EeeccCceEEEEEEec-CCCCceEEEEecCCCCChHH-HHHHHHHhhhccccccccccceeeecccCeeEEEEEecCCCC
Q 018699           55 CAGQGGFAKVFKAYVN-GDPEDVVALKIQKPAFPWEF-YMYRQLDQRISGRERSSFGFAHRIHLYSDYSILVCDYLSQGT  132 (351)
Q Consensus        55 ~lg~G~~g~V~~a~~~-~~~~~~vaiK~~~~~~~~e~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~s  132 (351)
                      .||.|+||.||+|.+. ...+..||+|++........ ..+...........|+++.....+.. ....++||||+++++
T Consensus         2 ~ig~G~~g~v~~~~~~~~~~~~~vavk~~~~~~~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~-~~~~~lv~e~~~~~~   80 (257)
T cd05115           2 ELGSGNFGCVKKGVYKMRKKQIDVAIKVLKNENEKSVRDEMMREAEIMHQLDNPYIVRMIGVCE-AEALMLVMEMASGGP   80 (257)
T ss_pred             ccCCCCcccEEEEEEecCCCceeEEEEEcccccChHHHHHHHHHHHHHHhcCCCCeEEEEEEEc-CCCeEEEEEeCCCCC
Confidence            4899999999999863 23456799999876533221 11222223334456777777766654 457799999999999


Q ss_pred             HHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeeccCCCCCcccCCeEEeecC
Q 018699          133 LQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSGPWQDQGLCLVDWG  212 (351)
Q Consensus       133 L~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~~~~~~~~~~~~l~Dfg  212 (351)
                      |.+++...   ...+++..++.++.|++.|+.|||++|++|+||+|+||+++                 .++.++|+|||
T Consensus        81 L~~~l~~~---~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nil~~-----------------~~~~~kl~dfg  140 (257)
T cd05115          81 LNKFLSGK---KDEITVSNVVELMHQVSMGMKYLEGKNFVHRDLAARNVLLV-----------------NQHYAKISDFG  140 (257)
T ss_pred             HHHHHHhC---CCCCCHHHHHHHHHHHHHHHHHHHhcCeeecccchheEEEc-----------------CCCcEEeccCC
Confidence            99998753   35789999999999999999999999999999999999998                 67789999999


Q ss_pred             CccccccCCCCcc-ccccccCCCcccceeccCCCCCccchHhHHHHHHHHHHh-CccccccccCCCCCce-eeecCcchh
Q 018699          213 RGIDLHLFPDNME-FEGDCRTSGFRCIEMQEKKPWKFQVDTYGLCAIVHMMLH-NSYMEIEKKASPDGGL-VYLPKLSFK  289 (351)
Q Consensus       213 ~a~~~~~~~~~~~-~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~-g~~p~~~~~~~~~~~~-~~~~~~~~~  289 (351)
                      ++........... .....++..|+|||.+.+..++.++|||||||++|++++ |..||........... ........+
T Consensus       141 ~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~  220 (257)
T cd05115         141 LSKALGADDSYYKARSAGKWPLKWYAPECINFRKFSSRSDVWSYGITMWEAFSYGQKPYKKMKGPEVMSFIEQGKRLDCP  220 (257)
T ss_pred             ccccccCCccceeccCCCCCCcccCCHHHHccCCCCchhhHHHHHHHHHHHhcCCCCCcCcCCHHHHHHHHHCCCCCCCC
Confidence            8864321111111 111123567999999988888999999999999999996 9999865432110000 001112223


Q ss_pred             hhhHHHHHHHHHHHHhcCCCCCChHHHHHHHH
Q 018699          290 RYWKVELWKSLFTNLLNMSSGNDKEVLQNLQK  321 (351)
Q Consensus       290 ~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~~  321 (351)
                      ...+ +.+.++|.+||..||++||++.++.+.
T Consensus       221 ~~~~-~~l~~li~~c~~~~~~~Rp~~~~i~~~  251 (257)
T cd05115         221 AECP-PEMYALMKDCWIYKWEDRPNFAKVEER  251 (257)
T ss_pred             CCCC-HHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence            3334 788999999999999999999998653

Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho

>smart00219 TyrKc Tyrosine kinase, catalytic domain

Probab=100.00  E-value=7.5e-36  Score=261.84  Aligned_cols=249  Identities=13%  Similarity=0.105  Sum_probs=184.8

Q ss_pred             EEEEEeeccCceEEEEEEecCCC---CceEEEEecCCCCCh-HHHHHHHHHhhhccccccccccceeeecccCeeEEEEE
Q 018699           51 QIKGCAGQGGFAKVFKAYVNGDP---EDVVALKIQKPAFPW-EFYMYRQLDQRISGRERSSFGFAHRIHLYSDYSILVCD  126 (351)
Q Consensus        51 ~i~~~lg~G~~g~V~~a~~~~~~---~~~vaiK~~~~~~~~-e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e  126 (351)
                      ++.+.||.|+||.||+|++....   +..||+|.+...... ....+...........++++..........+..+++||
T Consensus         2 ~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~i~e   81 (258)
T smart00219        2 TLGKKLGEGAFGEVYKGTLKGLSGEKEVEVAVKTLKEDADEQQIEEFLREARIMRKLDHPNIVKLLGVCTEEEPLMIVME   81 (258)
T ss_pred             cccceeccCCCcceEEEEecCCCCCCCceEEEEEccCCCChHHHHHHHHHHHHHHhcCCCchheEEEEEcCCCeeEEEEe
Confidence            57889999999999999963322   489999998766443 22222222233334467788888887777889999999


Q ss_pred             ecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeeccCCCCCcccCCe
Q 018699          127 YLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSGPWQDQGL  206 (351)
Q Consensus       127 ~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~~~~~~~~~~~  206 (351)
                      |+++++|.+++....  ...+++..+..++.|++.|+++||+.|++|+||+|+||+++                 .++.+
T Consensus        82 ~~~~~~l~~~~~~~~--~~~~~~~~~~~~~~ql~~~l~~lh~~~~~h~dl~~~nil~~-----------------~~~~~  142 (258)
T smart00219       82 YMEGGDLLDYLRKNR--PKELSLSDLLSFALQIARGMEYLESKNFIHRDLAARNCLVG-----------------ENLVV  142 (258)
T ss_pred             ccCCCCHHHHHHhhh--hccCCHHHHHHHHHHHHHHHHHHhcCCeeecccccceEEEc-----------------cCCeE
Confidence            999999999998742  11289999999999999999999999999999999999999                 67789


Q ss_pred             EEeecCCccccccCCCCccccccccCCCcccceeccCCCCCccchHhHHHHHHHHHHh-CccccccccCCCCCce-eeec
Q 018699          207 CLVDWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQEKKPWKFQVDTYGLCAIVHMMLH-NSYMEIEKKASPDGGL-VYLP  284 (351)
Q Consensus       207 ~l~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~-g~~p~~~~~~~~~~~~-~~~~  284 (351)
                      +|+|||.+........ .......++..|+|||.+.+..++.++|+||||+++|+|++ |.+||........... ....
T Consensus       143 ~l~dfg~~~~~~~~~~-~~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~i~~~l~~~g~~p~~~~~~~~~~~~~~~~~  221 (258)
T smart00219      143 KISDFGLSRDLYDDDY-YKKKGGKLPIRWMAPESLKDGKFTSKSDVWSFGVLLWEIFTLGESPYPGMSNEEVLEYLKKGY  221 (258)
T ss_pred             EEcccCCceecccccc-cccccCCCcccccChHHhccCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHhcCC
Confidence            9999998864332100 01111236788999999988888999999999999999998 7788764322100000 0011


Q ss_pred             CcchhhhhHHHHHHHHHHHHhcCCCCCChHHHHHHH
Q 018699          285 KLSFKRYWKVELWKSLFTNLLNMSSGNDKEVLQNLQ  320 (351)
Q Consensus       285 ~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~  320 (351)
                      ....+...+ ..+.+++.+||+.||++||++.|++.
T Consensus       222 ~~~~~~~~~-~~~~~~i~~~l~~~p~~Rpt~~~ll~  256 (258)
T smart00219      222 RLPKPENCP-PEIYKLMLQCWAEDPEDRPTFSELVE  256 (258)
T ss_pred             CCCCCCcCC-HHHHHHHHHHCcCChhhCcCHHHHHh
Confidence            112222233 78899999999999999999999875

Phosphotransferases. Tyrosine-specific kinase subfamily.

>cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases

Probab=100.00  E-value=1.1e-35  Score=261.20  Aligned_cols=244  Identities=12%  Similarity=0.045  Sum_probs=179.8

Q ss_pred             EEeeccCceEEEEEEecCCC--CceEEEEecCCCCCh--HHHHHHHHHhhhccccccccccceeeecccCeeEEEEEecC
Q 018699           54 GCAGQGGFAKVFKAYVNGDP--EDVVALKIQKPAFPW--EFYMYRQLDQRISGRERSSFGFAHRIHLYSDYSILVCDYLS  129 (351)
Q Consensus        54 ~~lg~G~~g~V~~a~~~~~~--~~~vaiK~~~~~~~~--e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~  129 (351)
                      ++||+|+||.||+|.+...+  +..+|+|.+......  +.....++ .......+++++....+.. .+..++||||++
T Consensus         1 ~~ig~G~~g~v~~~~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~-~~l~~l~h~~iv~~~~~~~-~~~~~~v~e~~~   78 (257)
T cd05060           1 KELGHGNFGSVVKGVYLMKSGKEVEVAVKTLKQEHIAAGKKEFLREA-SVMAQLDHPCIVRLIGVCK-GEPLMLVMELAP   78 (257)
T ss_pred             CccCccCceeEEEeEeeccCCCcceEEEEecccccchHHHHHHHHHH-HHHHhcCCCCeeeEEEEEc-CCceEEEEEeCC
Confidence            47999999999999863332  378999998866542  22222222 2333445677777766554 556799999999


Q ss_pred             CCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeeccCCCCCcccCCeEEe
Q 018699          130 QGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSGPWQDQGLCLV  209 (351)
Q Consensus       130 ~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~~~~~~~~~~~~l~  209 (351)
                      +++|.+++..    +..+++..+..++.|++.|+++||+.+++|+||+|+||+++                 .++.++|+
T Consensus        79 ~~~L~~~l~~----~~~~~~~~~~~~~~qi~~~l~~lh~~~i~H~di~p~nili~-----------------~~~~~kl~  137 (257)
T cd05060          79 LGPLLKYLKK----RREIPVSDLKELAHQVAMGMAYLESKHFVHRDLAARNVLLV-----------------NRHQAKIS  137 (257)
T ss_pred             CCcHHHHHHh----CCCCCHHHHHHHHHHHHHHHHHHhhcCeeccCcccceEEEc-----------------CCCcEEec
Confidence            9999999987    45789999999999999999999999999999999999998                 67789999


Q ss_pred             ecCCccccccCCCCc-cccccccCCCcccceeccCCCCCccchHhHHHHHHHHHHh-CccccccccCCCCCce-eeecCc
Q 018699          210 DWGRGIDLHLFPDNM-EFEGDCRTSGFRCIEMQEKKPWKFQVDTYGLCAIVHMMLH-NSYMEIEKKASPDGGL-VYLPKL  286 (351)
Q Consensus       210 Dfg~a~~~~~~~~~~-~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~-g~~p~~~~~~~~~~~~-~~~~~~  286 (351)
                      |||.+.......... ......++..|+|||.+.+..++.++||||||+++|++++ |..||........... ......
T Consensus       138 df~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~~~~~g~~p~~~~~~~~~~~~~~~~~~~  217 (257)
T cd05060         138 DFGMSRALGAGSDYYRATTAGRWPLKWYAPECINYGKFSSKSDVWSYGVTLWEAFSYGAKPYGEMKGAEVIAMLESGERL  217 (257)
T ss_pred             cccccceeecCCcccccccCccccccccCHHHhcCCCCCccchHHHHHHHHHHHHcCCCCCcccCCHHHHHHHHHcCCcC
Confidence            999886543211110 0111123457999999988889999999999999999997 8999865432210000 001112


Q ss_pred             chhhhhHHHHHHHHHHHHhcCCCCCChHHHHHHHH
Q 018699          287 SFKRYWKVELWKSLFTNLLNMSSGNDKEVLQNLQK  321 (351)
Q Consensus       287 ~~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~~  321 (351)
                      +.+..++ ..+.++|.+||.++|++||++.+++..
T Consensus       218 ~~~~~~~-~~l~~li~~cl~~~p~~Rp~~~~l~~~  251 (257)
T cd05060         218 PRPEECP-QEIYSIMLSCWKYRPEDRPTFSELEST  251 (257)
T ss_pred             CCCCCCC-HHHHHHHHHHhcCChhhCcCHHHHHHH
Confidence            2333344 788999999999999999999998754

Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi

>cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4

Probab=100.00  E-value=7e-36  Score=268.78  Aligned_cols=254  Identities=12%  Similarity=0.112  Sum_probs=185.6

Q ss_pred             EcCeeEEEEEEeeccCceEEEEEEecCCCCc----eEEEEecCCCCChHH-HHHHHHHhhhccccccccccceeeecccC
Q 018699           45 IGGKKYQIKGCAGQGGFAKVFKAYVNGDPED----VVALKIQKPAFPWEF-YMYRQLDQRISGRERSSFGFAHRIHLYSD  119 (351)
Q Consensus        45 i~~~~Y~i~~~lg~G~~g~V~~a~~~~~~~~----~vaiK~~~~~~~~e~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  119 (351)
                      +..++|++.+.||+|+||.||+|.+ ..+++    .||+|.+........ ..+...........|++++........ .
T Consensus         4 ~~~~~~~~~~~lg~G~~g~vy~~~~-~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~-~   81 (303)
T cd05110           4 LKETELKRVKVLGSGAFGTVYKGIW-VPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLVRLLGVCLS-P   81 (303)
T ss_pred             cchhhceeccccccCCCccEEEEEE-ecCCCcceeeEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEcC-C
Confidence            4557899999999999999999995 33443    579998875533221 112222233445567888887776653 3


Q ss_pred             eeEEEEEecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeeccCCCC
Q 018699          120 YSILVCDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSG  199 (351)
Q Consensus       120 ~~~lv~e~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~~~~  199 (351)
                      ..++++||+++|+|.+++...   ...+++..+..++.|++.|+.|||++||+|+||+|+||+++               
T Consensus        82 ~~~~v~e~~~~g~l~~~~~~~---~~~~~~~~~~~~~~qi~~~L~~LH~~~ivH~dikp~Nill~---------------  143 (303)
T cd05110          82 TIQLVTQLMPHGCLLDYVHEH---KDNIGSQLLLNWCVQIAKGMMYLEERRLVHRDLAARNVLVK---------------  143 (303)
T ss_pred             CceeeehhcCCCCHHHHHHhc---ccCCCHHHHHHHHHHHHHHHHHHhhcCeeccccccceeeec---------------
Confidence            467899999999999998764   34688999999999999999999999999999999999998               


Q ss_pred             CcccCCeEEeecCCccccccCCCCccccccccCCCcccceeccCCCCCccchHhHHHHHHHHHHh-CccccccccCCCCC
Q 018699          200 PWQDQGLCLVDWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQEKKPWKFQVDTYGLCAIVHMMLH-NSYMEIEKKASPDG  278 (351)
Q Consensus       200 ~~~~~~~~l~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~-g~~p~~~~~~~~~~  278 (351)
                        .++.++|+|||++................++..|+|||.+.+..++.++|||||||++|+|++ |..||.........
T Consensus       144 --~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~DiwslG~~l~el~t~g~~p~~~~~~~~~~  221 (303)
T cd05110         144 --SPNHVKITDFGLARLLEGDEKEYNADGGKMPIKWMALECIHYRKFTHQSDVWSYGVTIWELMTFGGKPYDGIPTREIP  221 (303)
T ss_pred             --CCCceEEccccccccccCcccccccCCCccccccCCHHHhccCCCChHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHH
Confidence              567799999999865432211111222345678999999988889999999999999999997 88888643211000


Q ss_pred             cee-eecCcchhhhhHHHHHHHHHHHHhcCCCCCChHHHHHHHH
Q 018699          279 GLV-YLPKLSFKRYWKVELWKSLFTNLLNMSSGNDKEVLQNLQK  321 (351)
Q Consensus       279 ~~~-~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~~  321 (351)
                      ... .....+.+..++ ..+.+++.+||..+|++||++.+++..
T Consensus       222 ~~~~~~~~~~~~~~~~-~~~~~li~~c~~~~p~~Rp~~~~l~~~  264 (303)
T cd05110         222 DLLEKGERLPQPPICT-IDVYMVMVKCWMIDADSRPKFKELAAE  264 (303)
T ss_pred             HHHHCCCCCCCCCCCC-HHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence            000 001111122233 678999999999999999999998774

Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin

>cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases

Probab=100.00  E-value=2.8e-35  Score=262.10  Aligned_cols=249  Identities=20%  Similarity=0.292  Sum_probs=187.2

Q ss_pred             EEEEEEeeccCceEEEEEEecCCCCceEEEEecCCCCC--hHHHHHHHHHhhhcccc-ccccccceeeecccCeeEEEEE
Q 018699           50 YQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFP--WEFYMYRQLDQRISGRE-RSSFGFAHRIHLYSDYSILVCD  126 (351)
Q Consensus        50 Y~i~~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~~--~e~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~lv~e  126 (351)
                      |++.+.||+|++|+||+|+ ...+++.|+||.+.....  .+....+++.. ..... ++++..+..+...++..++|||
T Consensus         1 y~~~~~ig~g~~g~v~~~~-~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~-l~~~~~h~~i~~~~~~~~~~~~~~lv~e   78 (283)
T cd07830           1 YKVIKQLGDGTFGSVYLAR-NKETGELVAIKKMKKKFYSWEECMNLREVKS-LRKLNEHPNIVKLKEVFRENDELYFVFE   78 (283)
T ss_pred             CeeheeeccCCceEEEEEE-ECCCCcEEEEEEehhhccchhHHHHHHHHHH-HHhccCCCCchhHHHHhhcCCcEEEEEe
Confidence            6889999999999999999 567789999999775433  12222223322 23334 7778888877777889999999


Q ss_pred             ecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeeccCCCCCcccCCe
Q 018699          127 YLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSGPWQDQGL  206 (351)
Q Consensus       127 ~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~~~~~~~~~~~  206 (351)
                      |+ +++|.+.+....  +..+++..+..++.|++.++.|||++|++|+||+|+||+++                 .++.+
T Consensus        79 ~~-~~~l~~~~~~~~--~~~~~~~~~~~~~~~l~~~l~~Lh~~~i~H~dl~~~ni~i~-----------------~~~~~  138 (283)
T cd07830          79 YM-EGNLYQLMKDRK--GKPFSESVIRSIIYQILQGLAHIHKHGFFHRDLKPENLLVS-----------------GPEVV  138 (283)
T ss_pred             cC-CCCHHHHHHhcc--cccCCHHHHHHHHHHHHHHHHHHHHCCcccCCCChhhEEEc-----------------CCCCE
Confidence            99 889999887632  24789999999999999999999999999999999999999                 77889


Q ss_pred             EEeecCCccccccCCCCccccccccCCCcccceeccC-CCCCccchHhHHHHHHHHHHhCccccccccCCCC--------
Q 018699          207 CLVDWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQEK-KPWKFQVDTYGLCAIVHMMLHNSYMEIEKKASPD--------  277 (351)
Q Consensus       207 ~l~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~~DiwslG~il~~l~~g~~p~~~~~~~~~--------  277 (351)
                      +|+|||.+.....   ........++..|+|||.+.+ ..++.++|+||+|+++++|++|.+||........        
T Consensus       139 ~l~d~~~~~~~~~---~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~s~G~~l~el~~g~~~~~~~~~~~~~~~~~~~~  215 (283)
T cd07830         139 KIADFGLAREIRS---RPPYTDYVSTRWYRAPEILLRSTSYSSPVDIWALGCIMAELYTLRPLFPGSSEIDQLYKICSVL  215 (283)
T ss_pred             EEeecccceeccC---CCCcCCCCCcccccCceeeecCcCcCCccchhhHHHHHHHHHhCCCccCCCChHHHHHHHHHhc
Confidence            9999998864321   112234567889999998744 5578999999999999999999988854321100        


Q ss_pred             -----------------Cceee--ecCcchhhhh--HHHHHHHHHHHHhcCCCCCChHHHHHHHHHH
Q 018699          278 -----------------GGLVY--LPKLSFKRYW--KVELWKSLFTNLLNMSSGNDKEVLQNLQKSF  323 (351)
Q Consensus       278 -----------------~~~~~--~~~~~~~~~~--~~~~~~~li~~~L~~dP~~R~s~~e~l~~~~  323 (351)
                                       .....  ..........  ....+.++|.+||..||++||++.|++.|+|
T Consensus       216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~~~  282 (283)
T cd07830         216 GTPTKQDWPEGYKLASKLGFRFPQFAPTSLHQLIPNASPEAIDLIKDMLRWDPKKRPTASQALQHPY  282 (283)
T ss_pred             CCCChhhhhhHhhhhccccccccccccccHHHHcccCCHHHHHHHHHhcccCcccCCCHHHHhhCCC
Confidence                             00000  0000011100  0167899999999999999999999999986

Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili

>PTZ00024 cyclin-dependent protein kinase; Provisional

Probab=100.00  E-value=8.2e-36  Score=272.15  Aligned_cols=252  Identities=18%  Similarity=0.200  Sum_probs=186.7

Q ss_pred             eeEE-EEEEeeccCceEEEEEEecCCCCceEEEEecCCCCChH---------------HHHHHHHHhhhccccccccccc
Q 018699           48 KKYQ-IKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFPWE---------------FYMYRQLDQRISGRERSSFGFA  111 (351)
Q Consensus        48 ~~Y~-i~~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~~~e---------------~~~~~~~~~~~~~~~~~~~~~~  111 (351)
                      ++|. +.+.||.|++|+||+|. +..+++.||+|++.......               ....+++ .......+++++..
T Consensus         8 ~ry~~~~~~ig~G~~g~vy~~~-~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~-~~l~~l~h~~iv~~   85 (335)
T PTZ00024          8 ERYIQKGAHLGEGTYGKVEKAY-DTLTGKIVAIKKVKIIEISNDVTKDRQLVGMCGIHFTTLREL-KIMNEIKHENIMGL   85 (335)
T ss_pred             cchhhhhhcccCCCceeEEEEE-ECCCCCeEEEEEeeccccccccccchhhhcccccchhHHHHH-HHHHhCCCcceeee
Confidence            5665 56789999999999999 56778999999976542221               0111221 22334457788888


Q ss_pred             eeeecccCeeEEEEEecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcce
Q 018699          112 HRIHLYSDYSILVCDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELT  191 (351)
Q Consensus       112 ~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~  191 (351)
                      ..++..++..++||||+. ++|.+++..    ...+++..+..++.|++.|+.+||+.|++|+||+|+||+++       
T Consensus        86 ~~~~~~~~~~~lv~e~~~-~~l~~~l~~----~~~~~~~~~~~~~~ql~~aL~~LH~~~i~H~dl~~~nill~-------  153 (335)
T PTZ00024         86 VDVYVEGDFINLVMDIMA-SDLKKVVDR----KIRLTESQVKCILLQILNGLNVLHKWYFMHRDLSPANIFIN-------  153 (335)
T ss_pred             eEEEecCCcEEEEEeccc-cCHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHhCCeecccccHHHeEEC-------
Confidence            888888889999999995 699998876    46789999999999999999999999999999999999998       


Q ss_pred             eeccCCCCCcccCCeEEeecCCccccccC------------CCCccccccccCCCcccceeccCC-CCCccchHhHHHHH
Q 018699          192 VLDHDRSGPWQDQGLCLVDWGRGIDLHLF------------PDNMEFEGDCRTSGFRCIEMQEKK-PWKFQVDTYGLCAI  258 (351)
Q Consensus       192 ~~~~~~~~~~~~~~~~l~Dfg~a~~~~~~------------~~~~~~~~~~g~~~y~aPE~~~~~-~~~~~~DiwslG~i  258 (351)
                                .++.++|+|||.+......            ..........+++.|+|||.+.+. .++.++|+|||||+
T Consensus       154 ----------~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~  223 (335)
T PTZ00024        154 ----------SKGICKIADFGLARRYGYPPYSDTLSKDETMQRREEMTSKVVTLWYRAPELLMGAEKYHFAVDMWSVGCI  223 (335)
T ss_pred             ----------CCCCEEECCccceeecccccccccccccccccccccccccccccCCCCChhcccCCCCCcHHHHHHHHHH
Confidence                      6778999999988643310            001112233467889999998664 46899999999999


Q ss_pred             HHHHHhCccccccccCCCC-------------Ccee------------eecCcch---hhhhHHHHHHHHHHHHhcCCCC
Q 018699          259 VHMMLHNSYMEIEKKASPD-------------GGLV------------YLPKLSF---KRYWKVELWKSLFTNLLNMSSG  310 (351)
Q Consensus       259 l~~l~~g~~p~~~~~~~~~-------------~~~~------------~~~~~~~---~~~~~~~~~~~li~~~L~~dP~  310 (351)
                      +|+|++|..||........             ..+.            ...+...   ....+ +.+.++|.+||++||.
T Consensus       224 l~el~tg~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~li~~~l~~~P~  302 (335)
T PTZ00024        224 FAELLTGKPLFPGENEIDQLGRIFELLGTPNEDNWPQAKKLPLYTEFTPRKPKDLKTIFPNAS-DDAIDLLQSLLKLNPL  302 (335)
T ss_pred             HHHHHhCCCCCCCCCHHHHHHHHHHHhCCCchhhCcchhhcccccccCcCCcccHHHhCcCCC-hHHHHHHHHHcCCCch
Confidence            9999999999865432100             0000            0000000   01123 7789999999999999


Q ss_pred             CChHHHHHHHHHHH
Q 018699          311 NDKEVLQNLQKSFQ  324 (351)
Q Consensus       311 ~R~s~~e~l~~~~~  324 (351)
                      +||+++|++.|+|-
T Consensus       303 ~R~s~~~~l~~~~~  316 (335)
T PTZ00024        303 ERISAKEALKHEYF  316 (335)
T ss_pred             hccCHHHHhcCccc
Confidence            99999999999864

>cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1

Probab=100.00  E-value=2.2e-35  Score=263.86  Aligned_cols=255  Identities=18%  Similarity=0.203  Sum_probs=189.6

Q ss_pred             eEEEEEEeeccCceEEEEEEec--CCCCceEEEEecCCCCCh-----HHHHHHHHHhhhccc-cccccccceeeecccCe
Q 018699           49 KYQIKGCAGQGGFAKVFKAYVN--GDPEDVVALKIQKPAFPW-----EFYMYRQLDQRISGR-ERSSFGFAHRIHLYSDY  120 (351)
Q Consensus        49 ~Y~i~~~lg~G~~g~V~~a~~~--~~~~~~vaiK~~~~~~~~-----e~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~  120 (351)
                      .|++.+.||.|+||.||.|++.  ..+|+.||+|++......     ......++ ..+... .++++......+..+..
T Consensus         1 ~y~~~~~lg~G~~g~v~~~~~~~~~~~g~~~aiK~~~~~~~~~~~~~~~~~~~e~-~~l~~l~~~~~i~~~~~~~~~~~~   79 (290)
T cd05613           1 NFELLKVLGTGAYGKVFLVRKVSGHDSGKLYAMKVLKKATIVQKAKTTEHTRTER-QVLEHIRQSPFLVTLHYAFQTDTK   79 (290)
T ss_pred             CceeeeeeccCCcceEEEEEeccCCCCCceEEEEEeehhhhhhcchHHHHHHHHH-HHHHhcccCCChhceeeEeecCCe
Confidence            4899999999999999999852  246899999998653211     11111111 122222 46777777777777888


Q ss_pred             eEEEEEecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeeccCCCCC
Q 018699          121 SILVCDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSGP  200 (351)
Q Consensus       121 ~~lv~e~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~~~~~  200 (351)
                      .++|+||+++++|.+++..    ...+++..+..++.|++.|+.|||+.|++|+||+|+||+++                
T Consensus        80 ~~lv~e~~~~~~L~~~l~~----~~~l~~~~~~~~~~qi~~al~~lH~~~i~H~dl~p~nil~~----------------  139 (290)
T cd05613          80 LHLILDYINGGELFTHLSQ----RERFKEQEVQIYSGEIVLALEHLHKLGIIYRDIKLENILLD----------------  139 (290)
T ss_pred             EEEEEecCCCCcHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHeEEC----------------
Confidence            9999999999999999877    46788999999999999999999999999999999999998                


Q ss_pred             cccCCeEEeecCCccccccCCCCccccccccCCCcccceeccC--CCCCccchHhHHHHHHHHHHhCccccccccCCCC-
Q 018699          201 WQDQGLCLVDWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQEK--KPWKFQVDTYGLCAIVHMMLHNSYMEIEKKASPD-  277 (351)
Q Consensus       201 ~~~~~~~l~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~--~~~~~~~DiwslG~il~~l~~g~~p~~~~~~~~~-  277 (351)
                       .++.++|+|||++....... ........|+..|+|||.+.+  ..++.++||||+|+++|+|++|..||........ 
T Consensus       140 -~~~~~kl~dfg~~~~~~~~~-~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~~~~~  217 (290)
T cd05613         140 -SNGHVVLTDFGLSKEFHEDE-VERAYSFCGTIEYMAPDIVRGGDGGHDKAVDWWSMGVLMYELLTGASPFTVDGEKNSQ  217 (290)
T ss_pred             -CCCCEEEeeCccceeccccc-ccccccccCCcccCChhhccCCCCCCCccccHHHHHHHHHHHhcCCCCCCcCCccccH
Confidence             67789999999886532211 111223457889999999865  3467899999999999999999999864322100 


Q ss_pred             ---CceeeecCcchhhhhHHHHHHHHHHHHhcCCCCCCh-----HHHHHHHHHHHHHH
Q 018699          278 ---GGLVYLPKLSFKRYWKVELWKSLFTNLLNMSSGNDK-----EVLQNLQKSFQDYL  327 (351)
Q Consensus       278 ---~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~-----s~~e~l~~~~~~~~  327 (351)
                         .........+.+...+ ..+.+++.+||..||++|+     ++.+++.|+|...+
T Consensus       218 ~~~~~~~~~~~~~~~~~~~-~~~~~ll~~~l~~~p~~R~~~~~~~~~~l~~~~~~~~~  274 (290)
T cd05613         218 AEISRRILKSEPPYPQEMS-ALAKDIIQRLLMKDPKKRLGCGPSDADEIKKHPFFQKI  274 (290)
T ss_pred             HHHHHHhhccCCCCCccCC-HHHHHHHHHHhcCCHHHhcCCCCCCHHHHHcCcccccC
Confidence               0001111222333334 7889999999999999997     78999999864433

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph

>cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases

Probab=100.00  E-value=6.7e-36  Score=261.09  Aligned_cols=243  Identities=21%  Similarity=0.228  Sum_probs=187.7

Q ss_pred             eeccCceEEEEEEecCCCCceEEEEecCCCCChH---HHHHHHHHhhhccccccccccceeeecccCeeEEEEEecCCCC
Q 018699           56 AGQGGFAKVFKAYVNGDPEDVVALKIQKPAFPWE---FYMYRQLDQRISGRERSSFGFAHRIHLYSDYSILVCDYLSQGT  132 (351)
Q Consensus        56 lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~~~e---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~s  132 (351)
                      ||.|++|.||.|.+ ..+++.+|+|.+.......   ...............++++.........++..++||||+++++
T Consensus         1 lg~G~~~~v~~~~~-~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~~~   79 (250)
T cd05123           1 LGKGSFGKVLLVRK-KDTGKLYAMKVLKKKKIIKRKEVEHTLTERNILSRINHPFIVKLHYAFQTEEKLYLVLEYAPGGE   79 (250)
T ss_pred             CCCCCceEEEEEEE-CCCCcEEEEEEeehhhhcchHHHHHHHHHHHHHHHcCCCcHHHHHHHeecCCeeEEEEecCCCCc
Confidence            68999999999994 5678999999987643321   1111111123344457777777777778889999999999999


Q ss_pred             HHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeeccCCCCCcccCCeEEeecC
Q 018699          133 LQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSGPWQDQGLCLVDWG  212 (351)
Q Consensus       133 L~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~~~~~~~~~~~~l~Dfg  212 (351)
                      |.+++..    ...+++..+..++.|++.|+.+||+.+++|+||+|+||+++                 .++.++|+|||
T Consensus        80 L~~~l~~----~~~l~~~~~~~~~~qi~~~l~~lh~~~~~H~~l~p~ni~~~-----------------~~~~~~l~d~~  138 (250)
T cd05123          80 LFSHLSK----EGRFSEERARFYAAEIVLALEYLHSLGIIYRDLKPENILLD-----------------ADGHIKLTDFG  138 (250)
T ss_pred             HHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCcceEEEc-----------------CCCcEEEeecC
Confidence            9999987    45789999999999999999999999999999999999999                 67789999999


Q ss_pred             CccccccCCCCccccccccCCCcccceeccCCCCCccchHhHHHHHHHHHHhCccccccccCCCCCceeeecCcchhhhh
Q 018699          213 RGIDLHLFPDNMEFEGDCRTSGFRCIEMQEKKPWKFQVDTYGLCAIVHMMLHNSYMEIEKKASPDGGLVYLPKLSFKRYW  292 (351)
Q Consensus       213 ~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~  292 (351)
                      .+......  ........++..|++||...+..++.++|+||||+++|++++|..||..................++...
T Consensus       139 ~~~~~~~~--~~~~~~~~~~~~~~~Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~  216 (250)
T cd05123         139 LAKELSSE--GSRTNTFCGTPEYLAPEVLLGKGYGKAVDWWSLGVLLYEMLTGKPPFYAEDRKEIYEKILKDPLRFPEFL  216 (250)
T ss_pred             cceecccC--CCcccCCcCCccccChHHhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHhcCCCCCCCCC
Confidence            88643211  1223445678899999999888888999999999999999999999965442111111111223333333


Q ss_pred             HHHHHHHHHHHHhcCCCCCChHH---HHHHHHHH
Q 018699          293 KVELWKSLFTNLLNMSSGNDKEV---LQNLQKSF  323 (351)
Q Consensus       293 ~~~~~~~li~~~L~~dP~~R~s~---~e~l~~~~  323 (351)
                      + +.+.++|.+||..||++||++   .+++.|+|
T Consensus       217 ~-~~l~~~i~~~l~~~p~~R~~~~~~~~l~~~~~  249 (250)
T cd05123         217 S-PEARDLISGLLQKDPTKRLGSGGAEEIKAHPF  249 (250)
T ss_pred             C-HHHHHHHHHHhcCCHhhCCCcccHHHHHhCCC
Confidence            4 788999999999999999999   89888875

Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the

>cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer

Probab=100.00  E-value=2e-35  Score=258.26  Aligned_cols=243  Identities=11%  Similarity=0.095  Sum_probs=181.9

Q ss_pred             EEeeccCceEEEEEEecCCCCceEEEEecCCCCChHH--HHHHHHHhhhccccccccccceeeecccCeeEEEEEecCCC
Q 018699           54 GCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFPWEF--YMYRQLDQRISGRERSSFGFAHRIHLYSDYSILVCDYLSQG  131 (351)
Q Consensus        54 ~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~~~e~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~  131 (351)
                      +.||+|++|.||+|..  .+++.+|+|++......+.  ....+ ........|+++.....+....+..++||||++++
T Consensus         1 ~~ig~g~~g~vy~~~~--~~~~~~a~K~~~~~~~~~~~~~~~~e-~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~   77 (250)
T cd05085           1 ELLGKGNFGEVFKGTL--KDKTPVAVKTCKEDLPQELKIKFLSE-ARILKQYDHPNIVKLIGVCTQRQPIYIVMELVPGG   77 (250)
T ss_pred             CccCCCCCceEEEEEe--cCCcEEEEEecCCcCCHHHHHHHHHH-HHHHHhCCCCCcCeEEEEEecCCccEEEEECCCCC
Confidence            3689999999999984  3578899999876654322  22222 22334456888888888888888899999999999


Q ss_pred             CHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeeccCCCCCcccCCeEEeec
Q 018699          132 TLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSGPWQDQGLCLVDW  211 (351)
Q Consensus       132 sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~~~~~~~~~~~~l~Df  211 (351)
                      +|.+++...   ...+++..+..++.|++.++.|+|++|++|+||+|+||+++                 .++.++|+||
T Consensus        78 ~L~~~~~~~---~~~~~~~~~~~~~~~i~~~l~~lH~~~~~H~dl~p~nili~-----------------~~~~~~l~d~  137 (250)
T cd05085          78 DFLSFLRKK---KDELKTKQLVKFALDAAAGMAYLESKNCIHRDLAARNCLVG-----------------ENNVLKISDF  137 (250)
T ss_pred             cHHHHHHhc---CCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccChheEEEc-----------------CCCeEEECCC
Confidence            999988753   34678999999999999999999999999999999999998                 6777999999


Q ss_pred             CCccccccCCCCccccccccCCCcccceeccCCCCCccchHhHHHHHHHHHHh-CccccccccCCCCCc-eeeecCcchh
Q 018699          212 GRGIDLHLFPDNMEFEGDCRTSGFRCIEMQEKKPWKFQVDTYGLCAIVHMMLH-NSYMEIEKKASPDGG-LVYLPKLSFK  289 (351)
Q Consensus       212 g~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~-g~~p~~~~~~~~~~~-~~~~~~~~~~  289 (351)
                      |++....... ........++..|+|||.+.+..++.++||||||+++|++++ |..||.......... .........+
T Consensus       138 g~~~~~~~~~-~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~ll~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~  216 (250)
T cd05085         138 GMSRQEDDGI-YSSSGLKQIPIKWTAPEALNYGRYSSESDVWSYGILLWETFSLGVCPYPGMTNQQAREQVEKGYRMSCP  216 (250)
T ss_pred             ccceeccccc-cccCCCCCCcccccCHHHhccCCCCchhHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHHcCCCCCCC
Confidence            9885422110 001111233567999999988888999999999999999998 888986433211000 0001111222


Q ss_pred             hhhHHHHHHHHHHHHhcCCCCCChHHHHHHHH
Q 018699          290 RYWKVELWKSLFTNLLNMSSGNDKEVLQNLQK  321 (351)
Q Consensus       290 ~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~~  321 (351)
                      ...+ ..+.+++.+||+.+|++||++.+++..
T Consensus       217 ~~~~-~~~~~li~~~l~~~p~~Rp~~~~l~~~  247 (250)
T cd05085         217 QKCP-DDVYKVMQRCWDYKPENRPKFSELQKE  247 (250)
T ss_pred             CCCC-HHHHHHHHHHcccCcccCCCHHHHHHH
Confidence            2233 789999999999999999999999764

Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c

>cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases

Probab=100.00  E-value=3.3e-35  Score=259.83  Aligned_cols=248  Identities=14%  Similarity=0.126  Sum_probs=175.8

Q ss_pred             EEeeccCceEEEEEEe-cCCCCceEEEEecCCCCChH--HHHHHHHHhhhccccccccccceeeecccCeeEEEEEecCC
Q 018699           54 GCAGQGGFAKVFKAYV-NGDPEDVVALKIQKPAFPWE--FYMYRQLDQRISGRERSSFGFAHRIHLYSDYSILVCDYLSQ  130 (351)
Q Consensus        54 ~~lg~G~~g~V~~a~~-~~~~~~~vaiK~~~~~~~~e--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~  130 (351)
                      +.||+|+||.||+|.. +......+++|.+......+  ...++++ .......|+++......+...+..++||||+++
T Consensus         1 ~~lg~G~fg~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~-~~~~~l~h~nii~~~~~~~~~~~~~lv~e~~~~   79 (269)
T cd05042           1 DEIGNGWFGKVLLGEAHRGMSKARVVVKELRASATPDEQLLFLQEV-QPYRELNHPNVLQCLGQCIESIPYLLVLEFCPL   79 (269)
T ss_pred             CcCCccCCceEEEEEEecCCCCeEEEEeecCccCChHHHHHHHHHH-HHHHhCCCCCcceEEEEECCCCceEEEEEeCCC
Confidence            3689999999999974 23345678999876543222  1222222 223445678888888877778889999999999


Q ss_pred             CCHHHHHHHHHh-hCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeeccCCCCCcccCCeEEe
Q 018699          131 GTLQDAINSYVV-IGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSGPWQDQGLCLV  209 (351)
Q Consensus       131 ~sL~~~l~~~~~-~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~~~~~~~~~~~~l~  209 (351)
                      ++|.+++..... .....++..+..++.||+.|++|||++||+|+||||+||+++                 .++.++|+
T Consensus        80 g~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nill~-----------------~~~~~kl~  142 (269)
T cd05042          80 GDLKNYLRSNRGMVAQMAQKDVLQRMACEVASGLLWLHQADFIHSDLALRNCQLT-----------------ADLSVKIG  142 (269)
T ss_pred             CcHHHHHHhccccccccccHHHHHHHHHHHHHHHHHHHhcCEecccccHhheEec-----------------CCCcEEEe
Confidence            999999976421 012346778889999999999999999999999999999999                 67789999


Q ss_pred             ecCCccccccCCCCccccccccCCCcccceecc-------CCCCCccchHhHHHHHHHHHHh-CccccccccCCC-----
Q 018699          210 DWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQE-------KKPWKFQVDTYGLCAIVHMMLH-NSYMEIEKKASP-----  276 (351)
Q Consensus       210 Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~-------~~~~~~~~DiwslG~il~~l~~-g~~p~~~~~~~~-----  276 (351)
                      |||++................++..|+|||++.       ...++.++|||||||++|+|++ |..||.......     
T Consensus       143 dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~~~~~~  222 (269)
T cd05042         143 DYGLALEQYPEDYYITKDCHAVPLRWLAPELVEIRGQDLLPKDQTKKSNIWSLGVTMWELFTAADQPYPDLSDEQVLKQV  222 (269)
T ss_pred             ccccccccccchheeccCCCCCcccccCHHHHhhccccccccccchhhHHHHHHHHHHHHHhCCCCCCCcCCHHHHHHHH
Confidence            999875322111011112234566799999874       2456789999999999999998 777876443210     


Q ss_pred             -CCceeeecCcchhhhhHHHHHHHHHHHHhcCCCCCChHHHHHHHH
Q 018699          277 -DGGLVYLPKLSFKRYWKVELWKSLFTNLLNMSSGNDKEVLQNLQK  321 (351)
Q Consensus       277 -~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~~  321 (351)
                       .......+.+..+..++ ..+.+++..|| .||++||++.+++.-
T Consensus       223 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~-~dp~~Rpt~~~v~~~  266 (269)
T cd05042         223 VREQDIKLPKPQLDLKYS-DRWYEVMQFCW-LDPETRPTAEEVHEL  266 (269)
T ss_pred             hhccCccCCCCcccccCC-HHHHHHHHHHh-cCcccccCHHHHHHH
Confidence             01111112222333344 77888999999 599999999998763

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina

>cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases

Probab=100.00  E-value=1.9e-35  Score=262.88  Aligned_cols=247  Identities=18%  Similarity=0.208  Sum_probs=187.4

Q ss_pred             EEEEEEeeccCceEEEEEEecCCCCceEEEEecCCCCChH---HHHHHHHHhhhccccccccccceeeecccCeeEEEEE
Q 018699           50 YQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFPWE---FYMYRQLDQRISGRERSSFGFAHRIHLYSDYSILVCD  126 (351)
Q Consensus        50 Y~i~~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~~~e---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e  126 (351)
                      |++.+.||+|++|.||+|. ...+++.||+|++......+   .....+ ........++++.....+....+..++|+|
T Consensus         1 y~~~~~ig~g~~~~vy~~~-~~~~~~~~~iK~~~~~~~~~~~~~~~~~e-~~~l~~~~~~~i~~~~~~~~~~~~~~~v~e   78 (282)
T cd07829           1 YEKLEKLGEGTYGVVYKAR-DKKTGEIVALKKIRLDNEEEGIPSTALRE-ISLLKELKHPNIVKLLDVIHTERKLYLVFE   78 (282)
T ss_pred             CeeehcccccCcceEEEee-ecCCCcEEEEEEeccccccccccHHHHHH-HHHHHhcCCCCHHHHHhhhhcCCceEEEec
Confidence            6788999999999999999 56778999999987653211   111112 122333457788888877777889999999


Q ss_pred             ecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeeccCCCCCcccCCe
Q 018699          127 YLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSGPWQDQGL  206 (351)
Q Consensus       127 ~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~~~~~~~~~~~  206 (351)
                      |+. ++|.+++...   +..+++..+..++.|++.|+++||++||+|+||+|+||+++                 .++.+
T Consensus        79 ~~~-~~l~~~i~~~---~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~~l~~~ni~~~-----------------~~~~~  137 (282)
T cd07829          79 YCD-MDLKKYLDKR---PGPLSPNLIKSIMYQLLRGLAYCHSHRILHRDLKPQNILIN-----------------RDGVL  137 (282)
T ss_pred             CcC-cCHHHHHHhh---ccCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCChheEEEc-----------------CCCCE
Confidence            995 6999999874   25789999999999999999999999999999999999999                 67889


Q ss_pred             EEeecCCccccccCCCCccccccccCCCcccceeccCC-CCCccchHhHHHHHHHHHHhCccccccccCCC---------
Q 018699          207 CLVDWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQEKK-PWKFQVDTYGLCAIVHMMLHNSYMEIEKKASP---------  276 (351)
Q Consensus       207 ~l~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~-~~~~~~DiwslG~il~~l~~g~~p~~~~~~~~---------  276 (351)
                      +|+|||.+.....  .........++..|+|||.+.+. .++.++|+|||||++|++++|..||.......         
T Consensus       138 ~l~d~g~~~~~~~--~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~~~~~~  215 (282)
T cd07829         138 KLADFGLARAFGI--PLRTYTHEVVTLWYRAPEILLGSKHYSTAVDIWSVGCIFAEMITGKPLFPGDSEIDQLFKIFQIL  215 (282)
T ss_pred             EEecCCcccccCC--CccccCccccCcCcCChHHhcCCcCCCccccHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHHHh
Confidence            9999998864321  12223334457789999998765 77899999999999999999999886433110         


Q ss_pred             -----------------CCceeeecCcc----hhhhhHHHHHHHHHHHHhcCCCCCChHHHHHHHHHH
Q 018699          277 -----------------DGGLVYLPKLS----FKRYWKVELWKSLFTNLLNMSSGNDKEVLQNLQKSF  323 (351)
Q Consensus       277 -----------------~~~~~~~~~~~----~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~~~~  323 (351)
                                       ...+.......    .+. .+ ..+.++|.+||..||++||++.+++.|||
T Consensus       216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-~~~~~~i~~~l~~~P~~Rp~~~~~l~~p~  281 (282)
T cd07829         216 GTPTEESWPGVTKLPDYKPTFPKFPPKDLEKVLPR-LD-PEGIDLLSKMLQYNPAKRISAKEALKHPY  281 (282)
T ss_pred             CCCcHHHHHhhcccccccccccccCccchHHhccc-cc-HHHHHHHHHhhccCcccCCCHHHHhhCcC
Confidence                             00000000000    111 12 67999999999999999999999999986

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the

>cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase

Probab=100.00  E-value=6.7e-36  Score=273.52  Aligned_cols=248  Identities=20%  Similarity=0.278  Sum_probs=185.4

Q ss_pred             CeeEEEEEEeeccCceEEEEEEecCCCCceEEEEecCCCCChH---HHHHHHHHhhhccccccccccceeeecccC----
Q 018699           47 GKKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFPWE---FYMYRQLDQRISGRERSSFGFAHRIHLYSD----  119 (351)
Q Consensus        47 ~~~Y~i~~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~~~e---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----  119 (351)
                      .++|++.+.||+|++|.||+|+ +..+++.||+|++.......   .....++ ..+....++++.....+....+    
T Consensus        14 ~~~y~~~~~ig~g~~g~vy~~~-~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~-~~l~~l~h~~iv~~~~~~~~~~~~~~   91 (343)
T cd07851          14 PDRYQNLSPVGSGAYGQVCSAF-DTKTGRKVAIKKLSRPFQSAIHAKRTYREL-RLLKHMDHENVIGLLDVFTPASSLED   91 (343)
T ss_pred             cCceEEEEEeccCCceEEEEEE-ECCCCcEEEEEecccccchhhHHHHHHHHH-HHHHhccCCCHHHHHHHhhccccccc
Confidence            6789999999999999999999 56778999999987543221   1112222 2334445666666555544333    


Q ss_pred             --eeEEEEEecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeeccCC
Q 018699          120 --YSILVCDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDR  197 (351)
Q Consensus       120 --~~~lv~e~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~~  197 (351)
                        ..++|+||+ +++|.+++..     ..+++..++.++.|++.|+.+||+.||+|+||+|+||+++             
T Consensus        92 ~~~~~lv~e~~-~~~L~~~~~~-----~~l~~~~~~~~~~ql~~aL~~LH~~gi~H~dlkp~Nill~-------------  152 (343)
T cd07851          92 FQDVYLVTHLM-GADLNNIVKC-----QKLSDDHIQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVN-------------  152 (343)
T ss_pred             cccEEEEEecC-CCCHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEEC-------------
Confidence              389999999 7799998875     4689999999999999999999999999999999999999             


Q ss_pred             CCCcccCCeEEeecCCccccccCCCCccccccccCCCcccceeccC-CCCCccchHhHHHHHHHHHHhCccccccccCCC
Q 018699          198 SGPWQDQGLCLVDWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQEK-KPWKFQVDTYGLCAIVHMMLHNSYMEIEKKASP  276 (351)
Q Consensus       198 ~~~~~~~~~~l~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~~DiwslG~il~~l~~g~~p~~~~~~~~  276 (351)
                          .++.++|+|||++.....     ......++..|+|||.+.+ ..++.++|||||||++|+|++|..||.......
T Consensus       153 ----~~~~~kL~dfg~~~~~~~-----~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGv~l~elltg~~pf~~~~~~~  223 (343)
T cd07851         153 ----EDCELKILDFGLARHTDD-----EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGKTLFPGSDHID  223 (343)
T ss_pred             ----CCCCEEEccccccccccc-----cccCCcccccccCHHHHhCCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHH
Confidence                677899999999864321     1233457888999999865 467899999999999999999999986433210


Q ss_pred             CCc----------------------------eeeecCcchhh---hhHHHHHHHHHHHHhcCCCCCChHHHHHHHHHHHH
Q 018699          277 DGG----------------------------LVYLPKLSFKR---YWKVELWKSLFTNLLNMSSGNDKEVLQNLQKSFQD  325 (351)
Q Consensus       277 ~~~----------------------------~~~~~~~~~~~---~~~~~~~~~li~~~L~~dP~~R~s~~e~l~~~~~~  325 (351)
                      ...                            ........+..   ..+ +.+.+||.+||++||.+||++.+++.|+|-.
T Consensus       224 ~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s-~~l~dli~~~l~~~P~~Rpt~~ell~h~~~~  302 (343)
T cd07851         224 QLKRIMNLVGTPDEELLQKISSESARNYIQSLPQMPKKDFKEVFSGAN-PLAIDLLEKMLVLDPDKRITAAEALAHPYLA  302 (343)
T ss_pred             HHHHHHHhcCCCCHHHHhhccchhHHHHHHhccccCCCCHHHHhccCC-HHHHHHHHHhCCCChhhCCCHHHHhcCCCcc
Confidence            000                            00000011111   123 7889999999999999999999999998643

Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK

>cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3

Probab=100.00  E-value=4.5e-35  Score=259.00  Aligned_cols=249  Identities=15%  Similarity=0.076  Sum_probs=176.5

Q ss_pred             EEeeccCceEEEEEEec-CCCCceEEEEecCCCCChHH-HHHHHHHhhhccccccccccceeeecccCeeEEEEEecCCC
Q 018699           54 GCAGQGGFAKVFKAYVN-GDPEDVVALKIQKPAFPWEF-YMYRQLDQRISGRERSSFGFAHRIHLYSDYSILVCDYLSQG  131 (351)
Q Consensus        54 ~~lg~G~~g~V~~a~~~-~~~~~~vaiK~~~~~~~~e~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~  131 (351)
                      +.||+|+||.||+|.+. ..++..+|+|.+........ ..+...........|++++............++||||++++
T Consensus         1 ~~lg~G~~g~Vy~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~g   80 (269)
T cd05087           1 KEIGNGWFGKVILGEVNSGYTPAQVVVKELRVSASVQEQMKFLEEAQPYRSLQHSNLLQCLGQCTEVTPYLLVMEFCPLG   80 (269)
T ss_pred             CcccccCCceEEEEEEcCCCCceEEEEEecCCCCChHHHHHHHHHHHHHHhCCCCCEeeEEEEEcCCCCcEEEEECCCCC
Confidence            36899999999999853 34567899998875543211 11222223344556788888777777778889999999999


Q ss_pred             CHHHHHHHHHh-hCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeeccCCCCCcccCCeEEee
Q 018699          132 TLQDAINSYVV-IGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSGPWQDQGLCLVD  210 (351)
Q Consensus       132 sL~~~l~~~~~-~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~~~~~~~~~~~~l~D  210 (351)
                      +|.+++..... .....++..+..++.|++.|+.|||+.|++|+||||+||+++                 .++.++|+|
T Consensus        81 ~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~H~dlkp~nil~~-----------------~~~~~kL~d  143 (269)
T cd05087          81 DLKGYLRSCRKAELMTPDPTTLQRMACEIALGLLHLHKNNFIHSDLALRNCLLT-----------------ADLTVKIGD  143 (269)
T ss_pred             cHHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHCCEeccccCcceEEEc-----------------CCCcEEECC
Confidence            99999976421 122456777888999999999999999999999999999999                 677899999


Q ss_pred             cCCccccccCCCCccccccccCCCcccceeccCC-------CCCccchHhHHHHHHHHHHh-CccccccccCCCC-----
Q 018699          211 WGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQEKK-------PWKFQVDTYGLCAIVHMMLH-NSYMEIEKKASPD-----  277 (351)
Q Consensus       211 fg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~-------~~~~~~DiwslG~il~~l~~-g~~p~~~~~~~~~-----  277 (351)
                      ||.+................++..|+|||++.+.       .++.++||||||+++|+|++ |..||........     
T Consensus       144 fg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~g~~p~~~~~~~~~~~~~~  223 (269)
T cd05087         144 YGLSHNKYKEDYYVTPDQLWVPLRWIAPELVDEVHGNLLVVDQTKESNVWSLGVTIWELFELGSQPYRHLSDEQVLTYTV  223 (269)
T ss_pred             ccccccccCcceeecCCCcCCcccccCHhHhccccccccccCCCccchhHHHHHHHHHHHhCCCCCCCCCChHHHHHHHh
Confidence            9988532211111111234567789999998542       35789999999999999996 9999864332210     


Q ss_pred             -CceeeecCcchhhhhHHHHHHHHHHHHhcCCCCCChHHHHHHHH
Q 018699          278 -GGLVYLPKLSFKRYWKVELWKSLFTNLLNMSSGNDKEVLQNLQK  321 (351)
Q Consensus       278 -~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~~  321 (351)
                       ......+.+......+ +.+.++|.+|| .+|++||++.+++..
T Consensus       224 ~~~~~~~~~~~~~~~~~-~~~~~l~~~c~-~~P~~Rpt~~~l~~~  266 (269)
T cd05087         224 REQQLKLPKPRLKLPLS-DRWYEVMQFCW-LQPEQRPSAEEVHLL  266 (269)
T ss_pred             hcccCCCCCCccCCCCC-hHHHHHHHHHh-cCcccCCCHHHHHHH
Confidence             0000111111111223 67889999999 689999999999753

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells

>cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase

Probab=100.00  E-value=2.1e-35  Score=263.76  Aligned_cols=254  Identities=18%  Similarity=0.194  Sum_probs=187.9

Q ss_pred             eEEEEEEeeccCceEEEEEEec--CCCCceEEEEecCCCCChH-----HHHHHHHHhhhccccccccccceeeecccCee
Q 018699           49 KYQIKGCAGQGGFAKVFKAYVN--GDPEDVVALKIQKPAFPWE-----FYMYRQLDQRISGRERSSFGFAHRIHLYSDYS  121 (351)
Q Consensus        49 ~Y~i~~~lg~G~~g~V~~a~~~--~~~~~~vaiK~~~~~~~~e-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  121 (351)
                      +|++.+.||.|++|.||+|++.  ..+++.||+|++.+.....     .....++........++++......+..+...
T Consensus         1 ~~~~~~~ig~G~~~~vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~~~~~~~   80 (288)
T cd05583           1 NFELLRVLGTGAYGKVFLVRKVGGHDAGKLYAMKVLKKATIVQKAKTAEHTRTERQVLEAVRRCPFLVTLHYAFQTDTKL   80 (288)
T ss_pred             CceEEEEeccCCCceEEEEEEeccccCCcEEEEEEEehHHHHhhhhHHHHHHHHHHHHHhccCCcchhhhheeeecCCEE
Confidence            4899999999999999999852  3467889999986432211     11111222111222467777777777778899


Q ss_pred             EEEEEecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeeccCCCCCc
Q 018699          122 ILVCDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSGPW  201 (351)
Q Consensus       122 ~lv~e~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~~~~~~  201 (351)
                      ++||||+++++|.+++..    +..+++..++.++.|++.||.|||+.|++|+||+|+||+++                 
T Consensus        81 ~lv~e~~~~~~L~~~~~~----~~~~~~~~~~~~~~ql~~~l~~lH~~~~~H~dl~p~nil~~-----------------  139 (288)
T cd05583          81 HLILDYVNGGELFTHLYQ----REHFTESEVRVYIAEIVLALDHLHQLGIIYRDIKLENILLD-----------------  139 (288)
T ss_pred             EEEEecCCCCcHHHHHhh----cCCcCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEEC-----------------
Confidence            999999999999999876    45788999999999999999999999999999999999998                 


Q ss_pred             ccCCeEEeecCCccccccCCCCccccccccCCCcccceeccCCC--CCccchHhHHHHHHHHHHhCccccccccCCCC--
Q 018699          202 QDQGLCLVDWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQEKKP--WKFQVDTYGLCAIVHMMLHNSYMEIEKKASPD--  277 (351)
Q Consensus       202 ~~~~~~l~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~--~~~~~DiwslG~il~~l~~g~~p~~~~~~~~~--  277 (351)
                      .++.++|+|||++...... .........++..|+|||.+.+..  .+.++|+||+|+++|+|++|..||........  
T Consensus       140 ~~~~~~l~dfg~~~~~~~~-~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~  218 (288)
T cd05583         140 SEGHVVLTDFGLSKEFLAE-EEERAYSFCGTIEYMAPEVIRGGSGGHDKAVDWWSLGVLTFELLTGASPFTVDGEQNSQS  218 (288)
T ss_pred             CCCCEEEEECccccccccc-cccccccccCCccccCHHHhcCCCCCCcchhhhHHHHHHHHHHHhCCCCcccCcccchHH
Confidence            6778999999988643221 111122345788999999987654  67899999999999999999999864322100  


Q ss_pred             --CceeeecCcchhhhhHHHHHHHHHHHHhcCCCCCChH---HHHHHHHHHHH
Q 018699          278 --GGLVYLPKLSFKRYWKVELWKSLFTNLLNMSSGNDKE---VLQNLQKSFQD  325 (351)
Q Consensus       278 --~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~s---~~e~l~~~~~~  325 (351)
                        .........+.+...+ ..+.++|.+||+.||++|||   +.++|.|+|..
T Consensus       219 ~~~~~~~~~~~~~~~~~~-~~l~~li~~~l~~~p~~R~t~~~~~~~l~~~~~~  270 (288)
T cd05583         219 EISRRILKSKPPFPKTMS-AEARDFIQKLLEKDPKKRLGANGADEIKNHPFFQ  270 (288)
T ss_pred             HHHHHHHccCCCCCcccC-HHHHHHHHHHhcCCHhhccCcchHHHHhcCcccc
Confidence              0001111222333344 78899999999999999998   56778888644

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines

>cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases

Probab=100.00  E-value=1.5e-35  Score=263.83  Aligned_cols=253  Identities=13%  Similarity=0.072  Sum_probs=187.0

Q ss_pred             CeeEEEEEEeeccCceEEEEEEec---CCCCceEEEEecCCCCCh--HHHHHHHHHhhhccccccccccceeeecc--cC
Q 018699           47 GKKYQIKGCAGQGGFAKVFKAYVN---GDPEDVVALKIQKPAFPW--EFYMYRQLDQRISGRERSSFGFAHRIHLY--SD  119 (351)
Q Consensus        47 ~~~Y~i~~~lg~G~~g~V~~a~~~---~~~~~~vaiK~~~~~~~~--e~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~  119 (351)
                      .+.|++.+.||+|+||.||+|.++   ..+++.||+|++......  ......++ ..+....++++.....+...  +.
T Consensus         3 ~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~ei-~~l~~l~~~~i~~~~~~~~~~~~~   81 (284)
T cd05038           3 KRHLKFIKQLGEGHFGKVELCRYDPLGDNTGEQVAVKSLNHSGEEQHRSDFEREI-EILRTLDHENIVKYKGVCEKPGGR   81 (284)
T ss_pred             hhhchhheeeccCCCeeEEEeeecCCCCCCceEEEEEEeccccchHHHHHHHHHH-HHHHhCCCCChheEEeeeecCCCC
Confidence            467899999999999999999863   235789999998866553  22222222 23344556777776666554  56


Q ss_pred             eeEEEEEecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeeccCCCC
Q 018699          120 YSILVCDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSG  199 (351)
Q Consensus       120 ~~~lv~e~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~~~~  199 (351)
                      ..+++|||+++++|.+++...   ...+++..+..++.|++.||.|||++|++|+||+|+||+++               
T Consensus        82 ~~~lv~e~~~~~~l~~~l~~~---~~~~~~~~~~~~~~~l~~aL~~lH~~~i~H~dl~p~nil~~---------------  143 (284)
T cd05038          82 SLRLIMEYLPSGSLRDYLQRH---RDQINLKRLLLFSSQICKGMDYLGSQRYIHRDLAARNILVE---------------  143 (284)
T ss_pred             ceEEEEecCCCCCHHHHHHhC---ccccCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHhEEEc---------------
Confidence            789999999999999999764   23689999999999999999999999999999999999999               


Q ss_pred             CcccCCeEEeecCCccccccCCCCcc-ccccccCCCcccceeccCCCCCccchHhHHHHHHHHHHhCccccccccCCCCC
Q 018699          200 PWQDQGLCLVDWGRGIDLHLFPDNME-FEGDCRTSGFRCIEMQEKKPWKFQVDTYGLCAIVHMMLHNSYMEIEKKASPDG  278 (351)
Q Consensus       200 ~~~~~~~~l~Dfg~a~~~~~~~~~~~-~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~p~~~~~~~~~~  278 (351)
                        .++.++|+|||.+........... .....++..|+|||.+.+..++.++||||||+++|+|++|..|+.........
T Consensus       144 --~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~el~tg~~p~~~~~~~~~~  221 (284)
T cd05038         144 --SEDLVKISDFGLAKVLPEDKDYYYVKEPGESPIFWYAPECLRTSKFSSASDVWSFGVTLYELFTYGDPSQSPPAEFLR  221 (284)
T ss_pred             --CCCCEEEcccccccccccCCcceeccCCCCCcccccCcHHHccCCCCcccchHHHhhhhheeeccCCCcccccchhcc
Confidence              677899999998865431111111 11223455699999998888899999999999999999999887643221100


Q ss_pred             ------------ce----eeecCcchhhhhHHHHHHHHHHHHhcCCCCCChHHHHHHHH
Q 018699          279 ------------GL----VYLPKLSFKRYWKVELWKSLFTNLLNMSSGNDKEVLQNLQK  321 (351)
Q Consensus       279 ------------~~----~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~~  321 (351)
                                  ..    ......+.+...+ ..+.+|+.+||+++|++||++.+++..
T Consensus       222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~li~~cl~~~p~~Rpt~~ei~~~  279 (284)
T cd05038         222 MIGIAQGQMIVTRLLELLKEGERLPRPPSCP-DEVYDLMKLCWEAEPQDRPSFADLILI  279 (284)
T ss_pred             ccccccccccHHHHHHHHHcCCcCCCCccCC-HHHHHHHHHHhccChhhCCCHHHHHHH
Confidence                        00    0001111122223 678999999999999999999999864

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut

>cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros

Probab=100.00  E-value=1.3e-35  Score=262.31  Aligned_cols=255  Identities=13%  Similarity=0.049  Sum_probs=183.3

Q ss_pred             EEeeccCceEEEEEEecC-----CCCceEEEEecCCCCCh-HHHHHHHHHhhhccccccccccceeeecccCeeEEEEEe
Q 018699           54 GCAGQGGFAKVFKAYVNG-----DPEDVVALKIQKPAFPW-EFYMYRQLDQRISGRERSSFGFAHRIHLYSDYSILVCDY  127 (351)
Q Consensus        54 ~~lg~G~~g~V~~a~~~~-----~~~~~vaiK~~~~~~~~-e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~  127 (351)
                      +.||.|++|.||+|++..     ..++.+|+|.+...... ....+...........|+++.....++...+..++||||
T Consensus         1 ~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~   80 (269)
T cd05044           1 NFLGSGAFGEVYEGTATDILGPGSGPIRVAVKTLRKGATDQEKKEFLKEAHLMSNFNHPNIVKLLGVCLLNEPQYIIMEL   80 (269)
T ss_pred             CccccccceeEEeeeecccccCcccceeehhhhhhcccchhhHHHHHHHHHHHHhcCCCCeeeEeeeecCCCCeEEEEec
Confidence            368999999999999531     23368999988654321 222222223344555788888888887778889999999


Q ss_pred             cCCCCHHHHHHHHHhh---CCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeeccCCCCCcccC
Q 018699          128 LSQGTLQDAINSYVVI---GKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSGPWQDQ  204 (351)
Q Consensus       128 ~~~~sL~~~l~~~~~~---~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~~~~~~~~~  204 (351)
                      +++++|.+++......   ...+++..+..++.|++.|++|||+.+++|+||+|+||+++.++.+            ...
T Consensus        81 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dl~p~nil~~~~~~~------------~~~  148 (269)
T cd05044          81 MEGGDLLSYLRDARVERFGPPLLTLKELLDICLDVAKGCVYLEQMHFIHRDLAARNCLVSEKGYD------------ADR  148 (269)
T ss_pred             cCCCcHHHHHHHhhhcccCCccccHHHHHHHHHHHHHHHHHHHhCCcccCCCChheEEEecCCCC------------CCc
Confidence            9999999999764221   2347889999999999999999999999999999999999943311            223


Q ss_pred             CeEEeecCCccccccCCCCccccccccCCCcccceeccCCCCCccchHhHHHHHHHHHHh-CccccccccCCCCCcee-e
Q 018699          205 GLCLVDWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQEKKPWKFQVDTYGLCAIVHMMLH-NSYMEIEKKASPDGGLV-Y  282 (351)
Q Consensus       205 ~~~l~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~-g~~p~~~~~~~~~~~~~-~  282 (351)
                      .++|+|||++................++..|+|||.+.+..++.++|||||||++|+|++ |..||............ .
T Consensus       149 ~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~ellt~g~~p~~~~~~~~~~~~~~~  228 (269)
T cd05044         149 VVKIGDFGLARDIYKSDYYRKEGEGLLPVRWMAPESLLDGKFTTQSDVWSFGVLMWEILTLGQQPYPALNNQEVLQHVTA  228 (269)
T ss_pred             ceEECCcccccccccccccccCcccCCCccccCHHHHccCCcccchhHHHHHHHHHHHHHcCCCCCcccCHHHHHHHHhc
Confidence            699999998864321111111122345678999999988889999999999999999998 99998644322110000 0


Q ss_pred             ecCcchhhhhHHHHHHHHHHHHhcCCCCCChHHHHHHHH
Q 018699          283 LPKLSFKRYWKVELWKSLFTNLLNMSSGNDKEVLQNLQK  321 (351)
Q Consensus       283 ~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~~  321 (351)
                      ......+...+ ..+.++|.+||.++|.+||++.+++..
T Consensus       229 ~~~~~~~~~~~-~~~~~li~~~l~~~p~~Rp~~~~i~~~  266 (269)
T cd05044         229 GGRLQKPENCP-DKIYQLMTNCWAQDPSERPTFDRIQEI  266 (269)
T ss_pred             CCccCCcccch-HHHHHHHHHHcCCCcccCCCHHHHHHH
Confidence            11112222233 778999999999999999999998754

Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male

>cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase

Probab=100.00  E-value=1.1e-35  Score=271.99  Aligned_cols=251  Identities=19%  Similarity=0.230  Sum_probs=186.5

Q ss_pred             CeeEEEEEEeeccCceEEEEEEecCCCCceEEEEecCCCCChHH--HHHHHHHhhhccccccccccceeeeccc------
Q 018699           47 GKKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFPWEF--YMYRQLDQRISGRERSSFGFAHRIHLYS------  118 (351)
Q Consensus        47 ~~~Y~i~~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~~~e~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~------  118 (351)
                      .++|++.+.||+|++|.||+|. +..+++.||+|.+........  ..............|+++.....++...      
T Consensus        14 ~~~y~~~~~lg~G~~g~V~~~~-~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~   92 (343)
T cd07880          14 PDRYRDLKQVGSGAYGTVCSAL-DRRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMKHENVIGLLDVFTPDLSLDRF   92 (343)
T ss_pred             ccceEEEEEeeecCCeEEEEEE-ECCCCcEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCccceeeeecCCcccccc
Confidence            6789999999999999999999 567789999999865432221  1111222234445667777666655433      


Q ss_pred             CeeEEEEEecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeeccCCC
Q 018699          119 DYSILVCDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRS  198 (351)
Q Consensus       119 ~~~~lv~e~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~~~  198 (351)
                      ..+++||||+ +++|.+++..     ..+++..++.++.|++.|+.|||+.||+|+||+|+||+++              
T Consensus        93 ~~~~lv~e~~-~~~l~~~~~~-----~~l~~~~~~~i~~qi~~al~~LH~~gi~H~dlkp~Nill~--------------  152 (343)
T cd07880          93 HDFYLVMPFM-GTDLGKLMKH-----EKLSEDRIQFLVYQMLKGLKYIHAAGIIHRDLKPGNLAVN--------------  152 (343)
T ss_pred             ceEEEEEecC-CCCHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEc--------------
Confidence            2468999999 8899988764     4689999999999999999999999999999999999999              


Q ss_pred             CCcccCCeEEeecCCccccccCCCCccccccccCCCcccceeccC-CCCCccchHhHHHHHHHHHHhCccccccccCCCC
Q 018699          199 GPWQDQGLCLVDWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQEK-KPWKFQVDTYGLCAIVHMMLHNSYMEIEKKASPD  277 (351)
Q Consensus       199 ~~~~~~~~~l~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~~DiwslG~il~~l~~g~~p~~~~~~~~~  277 (351)
                         .++.++|+|||++....     .......+++.|+|||.+.+ ..++.++|+||||+++|++++|..||........
T Consensus       153 ---~~~~~kl~dfg~~~~~~-----~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~  224 (343)
T cd07880         153 ---EDCELKILDFGLARQTD-----SEMTGYVVTRWYRAPEVILNWMHYTQTVDIWSVGCIMAEMLTGKPLFKGHDHLDQ  224 (343)
T ss_pred             ---CCCCEEEeecccccccc-----cCccccccCCcccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHH
Confidence               67789999999886432     11223456889999999865 4578999999999999999999999864321100


Q ss_pred             --------Cc----------------eee----ecCcchh---hhhHHHHHHHHHHHHhcCCCCCChHHHHHHHHHHHHH
Q 018699          278 --------GG----------------LVY----LPKLSFK---RYWKVELWKSLFTNLLNMSSGNDKEVLQNLQKSFQDY  326 (351)
Q Consensus       278 --------~~----------------~~~----~~~~~~~---~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~~~~~~~  326 (351)
                              ..                +..    .....+.   ...+ ..+.++|.+||+.||.+||++.+++.|+|...
T Consensus       225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~li~~~l~~dP~~R~t~~~~l~~~~~~~  303 (343)
T cd07880         225 LMEIMKVTGTPSKEFVQKLQSEDAKNYVKKLPRFRKKDFRSLLPNAN-PLAVNVLEKMLVLDAESRITAAEALAHPYFEE  303 (343)
T ss_pred             HHHHHHhcCCCCHHHHHhhcchhHHHHHHhccccCcchHHHhccCCC-hHHHHHHHHHcCCChhhCCCHHHHhcCccHhh
Confidence                    00                000    0000000   1122 66889999999999999999999999987654


Q ss_pred             H
Q 018699          327 L  327 (351)
Q Consensus       327 ~  327 (351)
                      +
T Consensus       304 ~  304 (343)
T cd07880         304 F  304 (343)
T ss_pred             h
Confidence            4

Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12

>cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1

Probab=100.00  E-value=2.6e-35  Score=267.90  Aligned_cols=251  Identities=19%  Similarity=0.229  Sum_probs=188.2

Q ss_pred             cCeeEEEEEEeeccCceEEEEEEecCCCCceEEEEecCCCCCh---HHHHHHHHHhhhccccccccccceeeecc-cCee
Q 018699           46 GGKKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFPW---EFYMYRQLDQRISGRERSSFGFAHRIHLY-SDYS  121 (351)
Q Consensus        46 ~~~~Y~i~~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~~~---e~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~  121 (351)
                      .+++|++.+.||.|+||.||+|. +..+++.||+|.+.+....   ......+ ...+....|++++.....+.. ....
T Consensus         8 ~~~~y~~~~~ig~g~~g~v~~~~-~~~~~~~vaiK~~~~~~~~~~~~~~~~~E-~~~l~~l~hpniv~~~~~~~~~~~~~   85 (328)
T cd07856           8 ITNRYVDLQPVGMGAFGLVCSAR-DQLTGQNVAIKKIMKPFSTPVLAKRTYRE-LKLLKHLRHENIISLSDIFISPLEDI   85 (328)
T ss_pred             cccceEEEEeecccCCeEEEEEE-ECCCCCEEEEEEecccccccchhHHHHHH-HHHHHhcCCCCeeeEeeeEecCCCcE
Confidence            46789999999999999999999 5678899999987653221   1122222 223444567788777776644 5678


Q ss_pred             EEEEEecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeeccCCCCCc
Q 018699          122 ILVCDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSGPW  201 (351)
Q Consensus       122 ~lv~e~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~~~~~~  201 (351)
                      ++|+||+ +++|..++..     ..+++..+..++.|++.|++|||+.||+|+||+|+||+++                 
T Consensus        86 ~lv~e~~-~~~L~~~~~~-----~~~~~~~~~~~~~ql~~aL~~LH~~~iiH~dl~p~Nili~-----------------  142 (328)
T cd07856          86 YFVTELL-GTDLHRLLTS-----RPLEKQFIQYFLYQILRGLKYVHSAGVVHRDLKPSNILIN-----------------  142 (328)
T ss_pred             EEEeehh-ccCHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEeEC-----------------
Confidence            9999999 6799888764     4678888999999999999999999999999999999998                 


Q ss_pred             ccCCeEEeecCCccccccCCCCccccccccCCCcccceeccC-CCCCccchHhHHHHHHHHHHhCccccccccCCCC---
Q 018699          202 QDQGLCLVDWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQEK-KPWKFQVDTYGLCAIVHMMLHNSYMEIEKKASPD---  277 (351)
Q Consensus       202 ~~~~~~l~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~~DiwslG~il~~l~~g~~p~~~~~~~~~---  277 (351)
                      .++.++|+|||.+....     .......++..|+|||.+.+ ..++.++|||||||++|+|++|..||........   
T Consensus       143 ~~~~~~l~dfg~~~~~~-----~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~tg~~~f~~~~~~~~~~~  217 (328)
T cd07856         143 ENCDLKICDFGLARIQD-----PQMTGYVSTRYYRAPEIMLTWQKYDVEVDIWSAGCIFAEMLEGKPLFPGKDHVNQFSI  217 (328)
T ss_pred             CCCCEEeCccccccccC-----CCcCCCcccccccCceeeeccCCcCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHH
Confidence            67789999999886422     12233456888999998765 5688999999999999999999999864332000   


Q ss_pred             ---------------------Cc----eeeecCcchhh---hhHHHHHHHHHHHHhcCCCCCChHHHHHHHHHHHHHH
Q 018699          278 ---------------------GG----LVYLPKLSFKR---YWKVELWKSLFTNLLNMSSGNDKEVLQNLQKSFQDYL  327 (351)
Q Consensus       278 ---------------------~~----~~~~~~~~~~~---~~~~~~~~~li~~~L~~dP~~R~s~~e~l~~~~~~~~  327 (351)
                                           ..    .......+...   ..+ +.++++|.+||+.+|++||++.+++.|+|...+
T Consensus       218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~li~~~l~~~P~~R~t~~ell~~~~~~~~  294 (328)
T cd07856         218 ITDLLGTPPDDVINTICSENTLRFVQSLPKREPVPFSEKFKNAD-PSAIDLLEKMLVFDPQKRISAAEALAHPYLAPY  294 (328)
T ss_pred             HHHHhCCCCHHHHHhccchhhHHHHhhccccCCCcHHHHcCCCC-HHHHHHHHHHcCCChhhCCCHHHHhcCCccccc
Confidence                                 00    00000111111   122 788999999999999999999999999875433

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U

>cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases

Probab=100.00  E-value=2.4e-35  Score=258.98  Aligned_cols=244  Identities=14%  Similarity=0.088  Sum_probs=176.3

Q ss_pred             EEeeccCceEEEEEEecCCCC----------ceEEEEecCCCCChHHHHHHHHHhhhccccccccccceeeecccCeeEE
Q 018699           54 GCAGQGGFAKVFKAYVNGDPE----------DVVALKIQKPAFPWEFYMYRQLDQRISGRERSSFGFAHRIHLYSDYSIL  123 (351)
Q Consensus        54 ~~lg~G~~g~V~~a~~~~~~~----------~~vaiK~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  123 (351)
                      +.||+|+||.||+|.+. .++          ..+++|.+....... ..+......+....|+++......... +..++
T Consensus         1 ~~lg~G~~~~v~~~~~~-~~~~~~~~~~~~~~~v~~k~~~~~~~~~-~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~l   77 (259)
T cd05037           1 EHLGQGTFTNIYKGVLR-VQSDLDIVGPGQEVSVVLKVLGSDHRDS-LAFFETASLMSQLSHKHLVKLYGVCVR-DENIM   77 (259)
T ss_pred             CcccccccceEEEEEEe-ccCCccccCCccceeeeeeccccchhhH-HHHHHHHHHHHcCCCcchhheeeEEec-CCcEE
Confidence            46899999999999963 333          357888776543322 222222234455567888877776655 67799


Q ss_pred             EEEecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeeccCCCCCccc
Q 018699          124 VCDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSGPWQD  203 (351)
Q Consensus       124 v~e~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~~~~~~~~  203 (351)
                      ||||+++++|.+++...   ...++...+..++.||+.||+|||++||+|+||||+||+++.+...          ....
T Consensus        78 v~e~~~~~~L~~~l~~~---~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~----------~~~~  144 (259)
T cd05037          78 VEEYVKFGPLDVFLHRE---KNNVSLHWKLDVAKQLASALHYLEDKKLVHGNVCGKNILVARYGLN----------EGYV  144 (259)
T ss_pred             EEEcCCCCcHHHHHHhh---ccCCCHHHHHHHHHHHHHHHHHHhhCCeecccCccceEEEecCccc----------cCCc
Confidence            99999999999999874   2378899999999999999999999999999999999999943211          0012


Q ss_pred             CCeEEeecCCccccccCCCCccccccccCCCcccceeccCC--CCCccchHhHHHHHHHHHHh-CccccccccCCCCCce
Q 018699          204 QGLCLVDWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQEKK--PWKFQVDTYGLCAIVHMMLH-NSYMEIEKKASPDGGL  280 (351)
Q Consensus       204 ~~~~l~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~--~~~~~~DiwslG~il~~l~~-g~~p~~~~~~~~~~~~  280 (351)
                      ..++|+|||++.....      .....++..|+|||.+.+.  .++.++|||||||++|+|++ |..|+...........
T Consensus       145 ~~~kl~Dfg~a~~~~~------~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~~~~~l~~~~~~p~~~~~~~~~~~~  218 (259)
T cd05037         145 PFIKLSDPGIPITVLS------REERVERIPWIAPECIRNGQASLTIAADKWSFGTTLLEICSNGEEPLSTLSSSEKERF  218 (259)
T ss_pred             eeEEeCCCCccccccc------ccccccCCCccChhhhcCCCCCcchhhHHHHHHHHHHHHHhCCCCCcccCCchhHHHH
Confidence            3699999998864321      1223456789999998776  77899999999999999999 4677755432211110


Q ss_pred             eeecCcchhhhhHHHHHHHHHHHHhcCCCCCChHHHHHHHH
Q 018699          281 VYLPKLSFKRYWKVELWKSLFTNLLNMSSGNDKEVLQNLQK  321 (351)
Q Consensus       281 ~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~~  321 (351)
                       .......+.... ..+.++|.+||+.+|.+||++.++++.
T Consensus       219 -~~~~~~~~~~~~-~~~~~li~~~l~~~p~~Rpt~~~il~~  257 (259)
T cd05037         219 -YQDQHRLPMPDC-AELANLINQCWTYDPTKRPSFRAILRD  257 (259)
T ss_pred             -HhcCCCCCCCCc-hHHHHHHHHHhccChhhCCCHHHHHHh
Confidence             001111111112 678999999999999999999998864

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki

>PLN03225 Serine/threonine-protein kinase SNT7; Provisional

Probab=100.00  E-value=2.3e-35  Score=283.87  Aligned_cols=261  Identities=18%  Similarity=0.208  Sum_probs=170.2

Q ss_pred             cCeeEEEEEEeeccCceEEEEEEecCCC----CceEEEEecCCCCChHHHHHHHHHhhhcccccccc-ccceee-ecccC
Q 018699           46 GGKKYQIKGCAGQGGFAKVFKAYVNGDP----EDVVALKIQKPAFPWEFYMYRQLDQRISGRERSSF-GFAHRI-HLYSD  119 (351)
Q Consensus        46 ~~~~Y~i~~~lg~G~~g~V~~a~~~~~~----~~~vaiK~~~~~~~~e~~~~~~~~~~~~~~~~~~~-~~~~~~-~~~~~  119 (351)
                      ..++|++.+.||+|+||.||+|++ ..+    +..||+|.+......+......+.+.........+ .+.... ...+.
T Consensus       130 ~~~~y~l~~~LG~G~FG~VYka~~-~~~~~~~~~~vAvK~~~~~~~~e~~~~e~l~~~~~~~~~~~~~~~~~~~~~~~~~  208 (566)
T PLN03225        130 KKDDFVLGKKLGEGAFGVVYKASL-VNKQSKKEGKYVLKKATEYGAVEIWMNERVRRACPNSCADFVYGFLEPVSSKKED  208 (566)
T ss_pred             ccCCeEEeEEEeeCCCeEEEEEEE-cCCccccCcEEEEEEecccchhHHHHHHHHHhhchhhHHHHHHhhhcccccccCC
Confidence            457899999999999999999994 566    78999998765443333322222221110000000 000111 13456


Q ss_pred             eeEEEEEecCCCCHHHHHHHHHh----------------hCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEE
Q 018699          120 YSILVCDYLSQGTLQDAINSYVV----------------IGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLI  183 (351)
Q Consensus       120 ~~~lv~e~~~~~sL~~~l~~~~~----------------~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill  183 (351)
                      ..++|+||+.+++|.+++.....                .+.......+..++.||+.||.|||+++|+||||||+||++
T Consensus       209 ~~~LV~ey~~~gsL~~~l~~~~~~~~v~~~l~~~~~~l~~~~~r~~~~i~~i~~qll~aL~yLH~~gIiHRDLKP~NILl  288 (566)
T PLN03225        209 EYWLVWRYEGESTLADLMQSKEFPYNVEPYLLGKVQDLPKGLERENKIIQTIMRQILFALDGLHSTGIVHRDVKPQNIIF  288 (566)
T ss_pred             ceEEEEEecCCCcHHHHHHhcCCchhHHHHhccchhhccccchhhHHHHHHHHHHHHHHHHHHHHCCEEeCcCCHHHEEE
Confidence            78999999999999999875310                00112234567899999999999999999999999999999


Q ss_pred             eecCCcceeeccCCCCCcccCCeEEeecCCccccccCCCCccccccccCCCcccceeccCC-------------------
Q 018699          184 RYARDELTVLDHDRSGPWQDQGLCLVDWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQEKK-------------------  244 (351)
Q Consensus       184 ~~~~~~~~~~~~~~~~~~~~~~~~l~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~-------------------  244 (351)
                      +.                ..+.+||+|||++...... .........+++.|+|||.+...                   
T Consensus       289 ~~----------------~~~~~KL~DFGlA~~l~~~-~~~~~~~~~~t~~Y~APE~~~~~~~~~~~~~~~~~~~~sp~l  351 (566)
T PLN03225        289 SE----------------GSGSFKIIDLGAAADLRVG-INYIPKEFLLDPRYAAPEQYIMSTQTPSAPSAPVATALSPVL  351 (566)
T ss_pred             eC----------------CCCcEEEEeCCCccccccc-cccCCcccccCCCccChHHhhccCCCCCCccccccccccchh
Confidence            83                2457999999998643211 11223445789999999975322                   


Q ss_pred             ---CCCccchHhHHHHHHHHHHhCccccccccCC-----CCCcee---e----ecC--cchhhhh-----HHHHHHHHHH
Q 018699          245 ---PWKFQVDTYGLCAIVHMMLHNSYMEIEKKAS-----PDGGLV---Y----LPK--LSFKRYW-----KVELWKSLFT  302 (351)
Q Consensus       245 ---~~~~~~DiwslG~il~~l~~g~~p~~~~~~~-----~~~~~~---~----~~~--~~~~~~~-----~~~~~~~li~  302 (351)
                         .++.++||||+||++|+|+++..++......     ......   +    ...  ......+     ......+||.
T Consensus       352 ~~~~~~~k~DVwSlGviL~el~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~dLi~  431 (566)
T PLN03225        352 WQLNLPDRFDIYSAGLIFLQMAFPNLRSDSNLIQFNRQLKRNDYDLVAWRKLVEPRASPDLRRGFEVLDLDGGAGWELLK  431 (566)
T ss_pred             ccccCCCCcccHHHHHHHHHHHhCcCCCchHHHHHHHHHHhcCCcHHHHHHhhccccchhhhhhhhhccccchHHHHHHH
Confidence               1234569999999999999987664321100     000000   0    000  0000000     0023458999


Q ss_pred             HHhcCCCCCChHHHHHHHHHHH
Q 018699          303 NLLNMSSGNDKEVLQNLQKSFQ  324 (351)
Q Consensus       303 ~~L~~dP~~R~s~~e~l~~~~~  324 (351)
                      +||++||.+|||+.|+|+|||.
T Consensus       432 ~mL~~dP~kR~ta~e~L~Hpff  453 (566)
T PLN03225        432 SMMRFKGRQRISAKAALAHPYF  453 (566)
T ss_pred             HHccCCcccCCCHHHHhCCcCc
Confidence            9999999999999999999984

>KOG4250 consensus TANK binding protein kinase TBK1 [Signal transduction mechanisms]

Probab=100.00  E-value=5.9e-36  Score=277.31  Aligned_cols=248  Identities=18%  Similarity=0.243  Sum_probs=189.3

Q ss_pred             CeeEEEEEEeeccCceEEEEEEecCCCCceEEEEecCCCC-ChHHHHHHHHHhhhccccccccccceeeecc------cC
Q 018699           47 GKKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAF-PWEFYMYRQLDQRISGRERSSFGFAHRIHLY------SD  119 (351)
Q Consensus        47 ~~~Y~i~~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~-~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~  119 (351)
                      +.-+...+.||+|+||.||+++ +..+|+.||||.+.+.. ....+.+-..-+......|++++...++...      ..
T Consensus        12 ~y~W~~~e~LG~Ga~g~V~rgr-nketG~~vAvK~~~~~~~~r~~e~~~~EieilkKLnh~NIVk~f~iee~~~~~~~~~   90 (732)
T KOG4250|consen   12 NYLWEMDERLGKGAFGNVYRGR-NKETGRLVAVKTFNKESSLRPRERWCREIEILKKLNHPNIVKLFDIEETKFLGLVTR   90 (732)
T ss_pred             CcceeehhhhcCCccceeeeec-ccccccchhHHhhhhhcccchHHHHHHHHHHHHHcCchhhhhhcccCCccccCcccc
Confidence            3567888999999999999999 68999999999987632 1122222222222334446778777776644      33


Q ss_pred             eeEEEEEecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeeccCCCC
Q 018699          120 YSILVCDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSG  199 (351)
Q Consensus       120 ~~~lv~e~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~~~~  199 (351)
                      ...+|||||.||+|...+++-.. ...|++.+.+.++..+..|+.|||++||+||||||.||++....+           
T Consensus        91 ~~vlvmEyC~gGsL~~~L~~PEN-~~GLpE~e~l~lL~d~~~al~~LrEn~IvHRDlKP~NIvl~~Ged-----------  158 (732)
T KOG4250|consen   91 LPVLVMEYCSGGSLRKVLNSPEN-AYGLPESEFLDLLSDLVSALRHLRENGIVHRDLKPGNIVLQIGED-----------  158 (732)
T ss_pred             cceEEEeecCCCcHHHHhcCccc-ccCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCcEEEeecCC-----------
Confidence            55899999999999999986432 356999999999999999999999999999999999999996654           


Q ss_pred             CcccCCeEEeecCCccccccCCCCccccccccCCCcccceeccC-CCCCccchHhHHHHHHHHHHhCccccccccCC---
Q 018699          200 PWQDQGLCLVDWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQEK-KPWKFQVDTYGLCAIVHMMLHNSYMEIEKKAS---  275 (351)
Q Consensus       200 ~~~~~~~~l~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~~DiwslG~il~~l~~g~~p~~~~~~~---  275 (351)
                        .....||+|||+|+..   .++....+..||+.|++||+... +.|+..+|.||+||++|++.||..||......   
T Consensus       159 --gq~IyKLtDfG~Arel---~d~s~~~S~vGT~~YLhPel~E~q~~y~~tVDLWS~GvtlY~caTG~lPF~p~~~pk~~  233 (732)
T KOG4250|consen  159 --GQSIYKLTDFGAAREL---DDNSLFTSLVGTEEYLHPELYERQKKYTATVDLWSFGVTLYECATGELPFIPFGGPKNN  233 (732)
T ss_pred             --CceEEeeecccccccC---CCCCeeeeecCchhhcChHHHhhccCcCceeehhhhhhHHHHHhccCCCCCcCCCcccc
Confidence              3456899999999764   35667888999999999999984 88899999999999999999999998643222   


Q ss_pred             ----------------------CCCceeee----cCcchhhhhHHHHHHHHHHHHhcCCCCCCh
Q 018699          276 ----------------------PDGGLVYL----PKLSFKRYWKVELWKSLFTNLLNMSSGNDK  313 (351)
Q Consensus       276 ----------------------~~~~~~~~----~~~~~~~~~~~~~~~~li~~~L~~dP~~R~  313 (351)
                                            ..+...+.    .+..+...+. ..+-..+..+|+.+|.+|-
T Consensus       234 ~~~~~~~~tkkp~~v~i~~~~~eNgpv~~s~~lP~p~~Ls~~l~-~~~~kwLa~~L~~~~~~~~  296 (732)
T KOG4250|consen  234 KEIMWHIITKKPSGVAIGAQEEENGPVEWSSTLPQPNHLSRGLA-TRLTKWLASMLEWNPRKRG  296 (732)
T ss_pred             chhhhhhhccCCCceeEeeecccCCceeeeccCCCcccccHHHH-hhhhHHHHHHHhhhHHHhC
Confidence                                  11222222    2222333334 6677788899999998876

>cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins

Probab=100.00  E-value=1.4e-35  Score=267.59  Aligned_cols=253  Identities=19%  Similarity=0.216  Sum_probs=181.4

Q ss_pred             CeeEEEEEEeeccCceEEEEEEecCCCCceEEEEecCCCCChH---HHHHHHHHhhhccccccccccceeeecc------
Q 018699           47 GKKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFPWE---FYMYRQLDQRISGRERSSFGFAHRIHLY------  117 (351)
Q Consensus        47 ~~~Y~i~~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~~~e---~~~~~~~~~~~~~~~~~~~~~~~~~~~~------  117 (351)
                      -++|++.+.||.|++|.||+|. +..+++.+|+|.+......+   ....+++ .......|+++.....+...      
T Consensus         7 ~~~y~~~~~lg~g~~~~v~~~~-~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~-~~l~~l~h~~i~~~~~~~~~~~~~~~   84 (311)
T cd07866           7 LRDYEILGKLGEGTFGEVYKAR-QIKTGRVVALKKILMHNEKDGFPITALREI-KILKKLKHPNVVPLIDMAVERPDKSK   84 (311)
T ss_pred             cccEEEEEEeccCCCEEEEEEE-ECCCCcEEEEEEEEeccCCCCcchhHHHHH-HHHHhcCCCCccchhhheeccccccc
Confidence            3689999999999999999999 56778899999875432211   1111222 22333456666666554422      


Q ss_pred             --cCeeEEEEEecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeecc
Q 018699          118 --SDYSILVCDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDH  195 (351)
Q Consensus       118 --~~~~~lv~e~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~  195 (351)
                        ...+++|+||+. ++|...+...   +..+++..+..++.|++.||.|||++|++|+||+|+||+++           
T Consensus        85 ~~~~~~~lv~~~~~-~~l~~~~~~~---~~~~~~~~~~~i~~~l~~al~~lH~~~i~H~dl~p~nil~~-----------  149 (311)
T cd07866          85 RKRGSVYMVTPYMD-HDLSGLLENP---SVKLTESQIKCYMLQLLEGINYLHENHILHRDIKAANILID-----------  149 (311)
T ss_pred             ccCceEEEEEecCC-cCHHHHHhcc---ccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEC-----------
Confidence              345799999994 5777776643   45799999999999999999999999999999999999999           


Q ss_pred             CCCCCcccCCeEEeecCCccccccCCCC---------ccccccccCCCcccceeccC-CCCCccchHhHHHHHHHHHHhC
Q 018699          196 DRSGPWQDQGLCLVDWGRGIDLHLFPDN---------MEFEGDCRTSGFRCIEMQEK-KPWKFQVDTYGLCAIVHMMLHN  265 (351)
Q Consensus       196 ~~~~~~~~~~~~l~Dfg~a~~~~~~~~~---------~~~~~~~g~~~y~aPE~~~~-~~~~~~~DiwslG~il~~l~~g  265 (351)
                            .++.++|+|||++.........         .......+++.|+|||.+.+ ..++.++||||+||++|+|++|
T Consensus       150 ------~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~~g  223 (311)
T cd07866         150 ------NQGILKIADFGLARPYDGPPPNPKGGGGGGTRKYTNLVVTRWYRPPELLLGERRYTTAVDIWGIGCVFAEMFTR  223 (311)
T ss_pred             ------CCCCEEECcCccchhccCCCcccccCCcccccccccceeccCcCChHHhhCCCccCchhHhHHHHHHHHHHHhC
Confidence                  7788999999988643322111         11123356788999998765 4578999999999999999999


Q ss_pred             ccccccccCCCCCc--------------------------eee-ecCcchhh---hhHHHHHHHHHHHHhcCCCCCChHH
Q 018699          266 SYMEIEKKASPDGG--------------------------LVY-LPKLSFKR---YWKVELWKSLFTNLLNMSSGNDKEV  315 (351)
Q Consensus       266 ~~p~~~~~~~~~~~--------------------------~~~-~~~~~~~~---~~~~~~~~~li~~~L~~dP~~R~s~  315 (351)
                      .+||..........                          ... ..+.....   ... ..+.+||.+||+.||.+||++
T Consensus       224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~i~~~l~~~p~~R~t~  302 (311)
T cd07866         224 RPILQGKSDIDQLHLIFKLCGTPTEETWPGWRSLPGCEGVHSFTNYPRTLEERFGKLG-PEGLDLLSKLLSLDPYKRLTA  302 (311)
T ss_pred             CCCCCCCCHHHHHHHHHHHhCCCChhhchhhhhcccccccccCCCCCccHHHHcccCC-hhHHHHHHHHcccCcccCcCH
Confidence            99986433210000                          000 00000000   112 578899999999999999999


Q ss_pred             HHHHHHHH
Q 018699          316 LQNLQKSF  323 (351)
Q Consensus       316 ~e~l~~~~  323 (351)
                      .+++.|+|
T Consensus       303 ~ell~~~~  310 (311)
T cd07866         303 SDALEHPY  310 (311)
T ss_pred             HHHhcCCC
Confidence            99999986

Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic

>cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron

Probab=100.00  E-value=2.1e-35  Score=259.96  Aligned_cols=247  Identities=12%  Similarity=0.095  Sum_probs=175.4

Q ss_pred             EEeeccCceEEEEEEecC--CCCceEEEEecCCCCC-hHHHHHHHHHhhhccccccccccceeeec-ccCeeEEEEEecC
Q 018699           54 GCAGQGGFAKVFKAYVNG--DPEDVVALKIQKPAFP-WEFYMYRQLDQRISGRERSSFGFAHRIHL-YSDYSILVCDYLS  129 (351)
Q Consensus        54 ~~lg~G~~g~V~~a~~~~--~~~~~vaiK~~~~~~~-~e~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~lv~e~~~  129 (351)
                      +.||+|+||.||+|.+..  ..+..||+|.+..... .+...+...........|+++........ .++..++||||+.
T Consensus         1 ~~lg~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~lv~e~~~   80 (262)
T cd05058           1 RVIGKGHFGCVYHGTLIDSDGQKIHCAVKSLNRITDLEEVEQFLKEGIIMKDFSHPNVLSLLGICLPSEGSPLVVLPYMK   80 (262)
T ss_pred             CcccccCCceEEEEEEecCCCceEEEEEEecCccCCHHHHHHHHHHHHHHccCCCCCcceEEEEeecCCCCcEEEEecCC
Confidence            468999999999998522  2356899998754322 22222222223345567778777766543 4566899999999


Q ss_pred             CCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeeccCCCCCcccCCeEEe
Q 018699          130 QGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSGPWQDQGLCLV  209 (351)
Q Consensus       130 ~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~~~~~~~~~~~~l~  209 (351)
                      +++|.+++...   ....+...+..++.|++.|+.|||+.+++|+||+|+||+++                 .++.++|+
T Consensus        81 ~~~L~~~~~~~---~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlk~~nili~-----------------~~~~~kl~  140 (262)
T cd05058          81 HGDLRNFIRSE---THNPTVKDLIGFGLQVAKGMEYLASKKFVHRDLAARNCMLD-----------------ESFTVKVA  140 (262)
T ss_pred             CCCHHHHHHhc---CCCCCHHHHHHHHHHHHHHHHHHHhCCccccccCcceEEEc-----------------CCCcEEEC
Confidence            99999999764   24456777888999999999999999999999999999998                 67789999


Q ss_pred             ecCCccccccCC--CCccccccccCCCcccceeccCCCCCccchHhHHHHHHHHHHhC-ccccccccCCCCCcee-eecC
Q 018699          210 DWGRGIDLHLFP--DNMEFEGDCRTSGFRCIEMQEKKPWKFQVDTYGLCAIVHMMLHN-SYMEIEKKASPDGGLV-YLPK  285 (351)
Q Consensus       210 Dfg~a~~~~~~~--~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g-~~p~~~~~~~~~~~~~-~~~~  285 (351)
                      |||++.......  .........++..|+|||.+.+..++.++|||||||++|+|++| .+||............ ....
T Consensus       141 dfg~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~~~~~~~~~~~~~~~~~~~~  220 (262)
T cd05058         141 DFGLARDIYDKEYYSVHNHTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVDSFDITVYLLQGRR  220 (262)
T ss_pred             CccccccccCCcceeecccccCcCCccccChhHhccCccchHHHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHhcCCC
Confidence            999886432110  00111122356689999999888889999999999999999996 4555432221000000 0011


Q ss_pred             cchhhhhHHHHHHHHHHHHhcCCCCCChHHHHHHHH
Q 018699          286 LSFKRYWKVELWKSLFTNLLNMSSGNDKEVLQNLQK  321 (351)
Q Consensus       286 ~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~~  321 (351)
                      ...+...+ +.+.+++.+||.++|++||++.+++..
T Consensus       221 ~~~~~~~~-~~~~~li~~cl~~~p~~Rp~~~~il~~  255 (262)
T cd05058         221 LLQPEYCP-DPLYEVMLSCWHPKPEMRPTFSELVSR  255 (262)
T ss_pred             CCCCCcCC-HHHHHHHHHHcCCChhhCCCHHHHHHH
Confidence            11222233 678999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca

>cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1

Probab=100.00  E-value=6.9e-35  Score=265.71  Aligned_cols=255  Identities=20%  Similarity=0.291  Sum_probs=183.8

Q ss_pred             eEEEEEEeeccCceEEEEEEecCCC--CceEEEEecCCCCChH---HHHHHHHHhhhccccccccccceeeec----ccC
Q 018699           49 KYQIKGCAGQGGFAKVFKAYVNGDP--EDVVALKIQKPAFPWE---FYMYRQLDQRISGRERSSFGFAHRIHL----YSD  119 (351)
Q Consensus        49 ~Y~i~~~lg~G~~g~V~~a~~~~~~--~~~vaiK~~~~~~~~e---~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~  119 (351)
                      +|++.+.||.|+||.||+|++ ...  +..||+|.+.......   .....++........|++++.......    ...
T Consensus         1 ~y~~~~~lg~G~~g~vy~~~~-~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~~   79 (332)
T cd07857           1 RYELIKELGQGAYGIVCSARN-AETSEEETVAIKKITNVFSKKILAKRALRELKLLRHFRGHKNITCLYDMDIVFPGNFN   79 (332)
T ss_pred             CceEEEEccccCCeEEEEEEe-CCCCcCceEEEEEeccccccchhHHHHHHHHHHHHHhcCCCChheeeeeeeeccccCC
Confidence            589999999999999999995 555  7899999876532221   112222221111224666666655432    224


Q ss_pred             eeEEEEEecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeeccCCCC
Q 018699          120 YSILVCDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSG  199 (351)
Q Consensus       120 ~~~lv~e~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~~~~  199 (351)
                      ..|++++++ +++|.+++..    +..+++..++.++.||+.||.|||++|++|+||+|+||+++               
T Consensus        80 ~~~~~~e~~-~~~L~~~l~~----~~~~~~~~~~~~~~qi~~aL~~LH~~givH~dlkp~Nili~---------------  139 (332)
T cd07857          80 ELYLYEELM-EADLHQIIRS----GQPLTDAHFQSFIYQILCGLKYIHSANVLHRDLKPGNLLVN---------------  139 (332)
T ss_pred             cEEEEEecc-cCCHHHHHhc----CCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHeEEc---------------
Confidence            578899998 5799998876    46789999999999999999999999999999999999999               


Q ss_pred             CcccCCeEEeecCCccccccCCC--CccccccccCCCcccceeccC-CCCCccchHhHHHHHHHHHHhCccccccccCCC
Q 018699          200 PWQDQGLCLVDWGRGIDLHLFPD--NMEFEGDCRTSGFRCIEMQEK-KPWKFQVDTYGLCAIVHMMLHNSYMEIEKKASP  276 (351)
Q Consensus       200 ~~~~~~~~l~Dfg~a~~~~~~~~--~~~~~~~~g~~~y~aPE~~~~-~~~~~~~DiwslG~il~~l~~g~~p~~~~~~~~  276 (351)
                        .++.++|+|||.+........  ........|+..|+|||.+.+ ..++.++||||+||++|+|++|.+||.......
T Consensus       140 --~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~Di~slGv~l~~l~~g~~pf~~~~~~~  217 (332)
T cd07857         140 --ADCELKICDFGLARGFSENPGENAGFMTEYVATRWYRAPEIMLSFQSYTKAIDVWSVGCILAELLGRKPVFKGKDYVD  217 (332)
T ss_pred             --CCCCEEeCcCCCceecccccccccccccCcccCccccCcHHHhCCCCCCcHHHHHHHHHHHHHHHhCCcCCCCCCHHH
Confidence              677899999998865332111  111233568899999998765 567899999999999999999999986432100


Q ss_pred             -------------CC---------------ceeeecCcchhhh---hHHHHHHHHHHHHhcCCCCCChHHHHHHHHHHHH
Q 018699          277 -------------DG---------------GLVYLPKLSFKRY---WKVELWKSLFTNLLNMSSGNDKEVLQNLQKSFQD  325 (351)
Q Consensus       277 -------------~~---------------~~~~~~~~~~~~~---~~~~~~~~li~~~L~~dP~~R~s~~e~l~~~~~~  325 (351)
                                   ..               .....+...++..   .+ ..+.+||.+||+.||.+||++.+++.|+|-.
T Consensus       218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~li~~~l~~~P~~R~t~~~ll~~~~~~  296 (332)
T cd07857         218 QLNQILQVLGTPDEETLSRIGSPKAQNYIRSLPNIPKKPFESIFPNAN-PLALDLLEKLLAFDPTKRISVEEALEHPYLA  296 (332)
T ss_pred             HHHHHHHHhCCCCHHHHHhhhhhhHHHHHHhccccCCcchHhhCCCCC-HHHHHHHHHHccCCcccCCCHHHHhcChhhh
Confidence                         00               0000011111111   12 6789999999999999999999999999865


Q ss_pred             HH
Q 018699          326 YL  327 (351)
Q Consensus       326 ~~  327 (351)
                      .+
T Consensus       297 ~~  298 (332)
T cd07857         297 IW  298 (332)
T ss_pred             hh
Confidence            44

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co

>cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases

Probab=100.00  E-value=3e-35  Score=262.17  Aligned_cols=249  Identities=21%  Similarity=0.246  Sum_probs=185.2

Q ss_pred             EEEEEEeeccCceEEEEEEecCCCCceEEEEecCCCCCh---HHHHHHHHHhhhccccccccccceeeeccc--CeeEEE
Q 018699           50 YQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFPW---EFYMYRQLDQRISGRERSSFGFAHRIHLYS--DYSILV  124 (351)
Q Consensus        50 Y~i~~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~~~---e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~lv  124 (351)
                      |++.+.||.|++|.||+|. ...+++.+|+|.+......   ......++ .......++++.....+....  +..++|
T Consensus         1 y~~~~~l~~g~~~~vy~~~-~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~-~~l~~l~~~~i~~~~~~~~~~~~~~~~lv   78 (287)
T cd07840           1 YEKIAQIGEGTYGQVYKAR-NKKTGELVALKKIRMENEKEGFPITAIREI-KLLQKLRHPNIVRLKEIVTSKGKGSIYMV   78 (287)
T ss_pred             CeeeEEeccCCCeEEEEEE-ECCCCeEEEEEEEecccccccchHHHHHHH-HHHHhccCCCeeeheeeEecCCCCcEEEE
Confidence            7889999999999999999 5677899999998765311   11122222 222333467777777777666  789999


Q ss_pred             EEecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeeccCCCCCcccC
Q 018699          125 CDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSGPWQDQ  204 (351)
Q Consensus       125 ~e~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~~~~~~~~~  204 (351)
                      +||++ ++|.+++...   +..+++..++.++.|++.|+++||+.|++|+||+|+||+++                 .++
T Consensus        79 ~e~~~-~~l~~~~~~~---~~~~~~~~~~~i~~~i~~al~~LH~~~~~h~dl~p~nil~~-----------------~~~  137 (287)
T cd07840          79 FEYMD-HDLTGLLDSP---EVKFTESQIKCYMKQLLEGLQYLHSNGILHRDIKGSNILIN-----------------NDG  137 (287)
T ss_pred             ecccc-ccHHHHHhcc---CCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCcHHHeEEc-----------------CCC
Confidence            99995 5898888763   35789999999999999999999999999999999999999                 778


Q ss_pred             CeEEeecCCccccccCCCCccccccccCCCcccceeccC-CCCCccchHhHHHHHHHHHHhCccccccccCCCC------
Q 018699          205 GLCLVDWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQEK-KPWKFQVDTYGLCAIVHMMLHNSYMEIEKKASPD------  277 (351)
Q Consensus       205 ~~~l~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~~DiwslG~il~~l~~g~~p~~~~~~~~~------  277 (351)
                      .++|+|||.+....... ........++..|+|||.+.+ ..++.++||||||+++|+|++|..||........      
T Consensus       138 ~~~l~d~g~~~~~~~~~-~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~t~~~p~~~~~~~~~~~~~~~  216 (287)
T cd07840         138 VLKLADFGLARPYTKRN-SADYTNRVITLWYRPPELLLGATRYGPEVDMWSVGCILAELFLGKPIFQGSTELEQLEKIFE  216 (287)
T ss_pred             CEEEccccceeeccCCC-cccccccccccccCCceeeEccccCChHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHH
Confidence            89999999886543221 112233456788999998765 4578999999999999999999999864332100      


Q ss_pred             -------Cce----------eeecCcchhhh--------hHHHHHHHHHHHHhcCCCCCChHHHHHHHHHH
Q 018699          278 -------GGL----------VYLPKLSFKRY--------WKVELWKSLFTNLLNMSSGNDKEVLQNLQKSF  323 (351)
Q Consensus       278 -------~~~----------~~~~~~~~~~~--------~~~~~~~~li~~~L~~dP~~R~s~~e~l~~~~  323 (351)
                             ..+          ........+..        .+ ..+.++|.+||..+|.+||++.+++.|+|
T Consensus       217 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~i~~~l~~~P~~Rp~~~~~l~~~~  286 (287)
T cd07840         217 LCGSPTDENWPGVSKLPWFENLKPKKPYKRRLREFFKHLID-PSALDLLDKLLTLDPKKRISADQALQHEY  286 (287)
T ss_pred             HhCCCchhhccccccchhhhhccccccchhHHHHHhcccCC-HHHHHHHHHHcCCChhhCcCHHHHhhCcC
Confidence                   000          00000010100        12 67889999999999999999999999876

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po

>KOG1290 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=2.1e-35  Score=262.65  Aligned_cols=270  Identities=18%  Similarity=0.232  Sum_probs=191.1

Q ss_pred             cCeeEEEEEEeeccCceEEEEEEecCCCCceEEEEecCCC------CChHHHHHHHHHhhh-ccccccccccceeee---
Q 018699           46 GGKKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPA------FPWEFYMYRQLDQRI-SGRERSSFGFAHRIH---  115 (351)
Q Consensus        46 ~~~~Y~i~~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~------~~~e~~~~~~~~~~~-~~~~~~~~~~~~~~~---  115 (351)
                      +++||-++++||+|.|+|||+|+ +....++||+|+.+..      ...|+.+++++..-- .......++.+.+.+   
T Consensus        76 ~~gRY~v~rKLGWGHFSTVWLaw-Dtq~~r~VAlKVvKSAqhYtEaAlDEIklL~~v~~~Dp~~~~~~~VV~LlD~Fkhs  154 (590)
T KOG1290|consen   76 NGGRYHVQRKLGWGHFSTVWLAW-DTQNKRYVALKVVKSAQHYTEAALDEIKLLQQVREGDPNDPGKKCVVQLLDHFKHS  154 (590)
T ss_pred             cCceEEEEEeccccccceeEEEe-eccCCeEEEEEEEehhhHHHHHHHHHHHHHHHHHhcCCCCCCCceeeeeeccceec
Confidence            45899999999999999999999 6777899999998754      234555555554422 112222333333333   


Q ss_pred             -cccCeeEEEEEecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHC-CceecCCCCCcEEEeecCCcc---
Q 018699          116 -LYSDYSILVCDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDV-GIIHGDFKPDNLLIRYARDEL---  190 (351)
Q Consensus       116 -~~~~~~~lv~e~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~-~i~H~dl~p~Nill~~~~~~~---  190 (351)
                       ..+..+|+|+|++ |.+|..+|.....+  -++...++.|++||+.||.|||.. ||+|.||||+|||+...+...   
T Consensus       155 GpNG~HVCMVfEvL-GdnLLklI~~s~Yr--Glpl~~VK~I~~qvL~GLdYLH~ecgIIHTDlKPENvLl~~~e~~~~~~  231 (590)
T KOG1290|consen  155 GPNGQHVCMVFEVL-GDNLLKLIKYSNYR--GLPLSCVKEICRQVLTGLDYLHRECGIIHTDLKPENVLLCSTEIDPAKD  231 (590)
T ss_pred             CCCCcEEEEEehhh-hhHHHHHHHHhCCC--CCcHHHHHHHHHHHHHHHHHHHHhcCccccCCCcceeeeeccccchhhh
Confidence             3467899999999 99999999987643  477788999999999999999987 999999999999998642211   


Q ss_pred             ----------------------------------------------------------------------------eeec
Q 018699          191 ----------------------------------------------------------------------------TVLD  194 (351)
Q Consensus       191 ----------------------------------------------------------------------------~~~~  194 (351)
                                                                                                  .+..
T Consensus       232 ~~~a~e~~~~~p~~s~s~~~t~~d~~~~~~~~~~s~~~~k~~~kk~~r~~~~~~~~l~~~~~~~~~~~~~s~n~~~~~n~  311 (590)
T KOG1290|consen  232 AREAGEATTSLPKMSPSAVSTRPDALQRMAAEPMSKSKFKKMKKKLKRQAKKLEASLAGLEGIEEEPNQESYNNEPRING  311 (590)
T ss_pred             hhhhccccccCCCCCcccccccccccchhhccccchhhHHHHHHHHhhhhhhhhhhhcccccccccccccccccccCCCc
Confidence                                                                                        0000


Q ss_pred             c------------------------CC----------------------------C------------------CCcccC
Q 018699          195 H------------------------DR----------------------------S------------------GPWQDQ  204 (351)
Q Consensus       195 ~------------------------~~----------------------------~------------------~~~~~~  204 (351)
                      .                        ..                            +                  .....-
T Consensus       312 ~~~~v~~~~~~~~~~~~~~~~n~~~k~~e~~~~~~~sl~~~~~~~~~t~~~~~~~s~~s~~~~~~n~~v~p~~~~~~~di  391 (590)
T KOG1290|consen  312 NESTVERSTLEEDSNENGNRENLPIKSPENFRGNNTSLPESQLRDSATPSDGSLSSPSSPGTIASNPLVNPDIPLPECDI  391 (590)
T ss_pred             cccchhhcccccccccccCCccccccCccccccccccccchhcccccccccccccCcCCccccccccccCCCCCCCccce
Confidence            0                        00                            0                  001122


Q ss_pred             CeEEeecCCccccccCCCCccccccccCCCcccceeccCCCCCccchHhHHHHHHHHHHhCccccccccCCC--------
Q 018699          205 GLCLVDWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQEKKPWKFQVDTYGLCAIVHMMLHNSYMEIEKKASP--------  276 (351)
Q Consensus       205 ~~~l~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~p~~~~~~~~--------  276 (351)
                      .+||+|||-|.-.     ...+...+.|..|+|||++.|..|+..+||||++|++|||.||.+.|.......        
T Consensus       392 ~vKIaDlGNACW~-----~khFT~DIQTRQYRapEVllGsgY~~~ADiWS~AC~~FELaTGDyLFePhsG~~Y~rDEDHi  466 (590)
T KOG1290|consen  392 RVKIADLGNACWV-----HKHFTEDIQTRQYRAPEVLLGSGYSTSADIWSTACMAFELATGDYLFEPHSGENYSRDEDHI  466 (590)
T ss_pred             eEEEeeccchhhh-----hhhhchhhhhhhccCcceeecCCCCCchhHHHHHHHHHHhhcCceeecCCCCCCCCccHHHH
Confidence            3678888865421     344555678999999999999999999999999999999999998875332210        


Q ss_pred             ----------------CCcee--------------e----------ecCcchhhhhHHHHHHHHHHHHhcCCCCCChHHH
Q 018699          277 ----------------DGGLV--------------Y----------LPKLSFKRYWKVELWKSLFTNLLNMSSGNDKEVL  316 (351)
Q Consensus       277 ----------------~~~~~--------------~----------~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~  316 (351)
                                      .+.+.              .          .....++..-. .++.+|+.-||+.+|++|+||.
T Consensus       467 A~i~ELLG~iPr~ia~~Gk~SRdFFnr~G~LrhI~~LK~WpL~~VL~eKY~~s~e~A-~~fsdFL~PmLef~PeKR~tA~  545 (590)
T KOG1290|consen  467 ALIMELLGKIPRKIALGGKYSRDFFNRRGELRHIRRLKPWPLYEVLIEKYEWSEEDA-QQFSDFLSPMLEFDPEKRPTAA  545 (590)
T ss_pred             HHHHHHHhhccHHHHhcCcchHhhhccccceecccccCCCcHHHHHHHHhCCCHHHH-HHHHHHHHHHHhcCccccccHH
Confidence                            01110              0          01111111112 7788999999999999999999


Q ss_pred             HHHHHHHHH
Q 018699          317 QNLQKSFQD  325 (351)
Q Consensus       317 e~l~~~~~~  325 (351)
                      +.|+|||-+
T Consensus       546 ~cl~hPwLn  554 (590)
T KOG1290|consen  546 QCLKHPWLN  554 (590)
T ss_pred             HHhcCcccc
Confidence            999999744

>cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2

Probab=100.00  E-value=1.2e-35  Score=267.77  Aligned_cols=248  Identities=18%  Similarity=0.140  Sum_probs=187.3

Q ss_pred             CeeEEEEEEeeccCceEEEEEEecCCCCceEEEEecCCCCChHH----HHHHHHHhhhccccccccccceeeecccCeeE
Q 018699           47 GKKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFPWEF----YMYRQLDQRISGRERSSFGFAHRIHLYSDYSI  122 (351)
Q Consensus        47 ~~~Y~i~~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~~~e~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  122 (351)
                      .+.|...+.||.|++|+||+|+ +..+++.||+|.+........    ....++ ..+....++++.....+.......+
T Consensus        14 ~~~~~~~~~lg~g~~g~v~~~~-~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~-~~l~~l~h~~i~~~~~~~~~~~~~~   91 (308)
T cd06634          14 EKLFSDLREIGHGSFGAVYFAR-DVRNSEVVAIKKMSYSGKQSNEKWQDIIKEV-RFLQKLRHPNTIQYRGCYLREHTAW   91 (308)
T ss_pred             HHHHHHHHheeeCCCEEEEEEE-EcCCCcEEEEEEEecccccChHHHHHHHHHH-HHHHhCCCCCcccEEEEEEcCCeeE
Confidence            4568889999999999999999 567789999998764322111    112222 2334456777777777777788899


Q ss_pred             EEEEecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeeccCCCCCcc
Q 018699          123 LVCDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSGPWQ  202 (351)
Q Consensus       123 lv~e~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~~~~~~~  202 (351)
                      +||||+. +++.+.+...   +..+++..+..++.|++.|+.|||+++++|+||+|+||+++                 .
T Consensus        92 lv~e~~~-~~l~~~~~~~---~~~l~~~~~~~~~~~l~~~l~~LH~~~i~H~dl~p~nil~~-----------------~  150 (308)
T cd06634          92 LVMEYCL-GSASDLLEVH---KKPLQEVEIAAVTHGALQGLAYLHSHNMIHRDVKAGNILLS-----------------E  150 (308)
T ss_pred             EEEEccC-CCHHHHHHHc---CCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHhEEEC-----------------C
Confidence            9999995 6888777653   45789999999999999999999999999999999999998                 6


Q ss_pred             cCCeEEeecCCccccccCCCCccccccccCCCcccceecc---CCCCCccchHhHHHHHHHHHHhCccccccccCCCC-C
Q 018699          203 DQGLCLVDWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQE---KKPWKFQVDTYGLCAIVHMMLHNSYMEIEKKASPD-G  278 (351)
Q Consensus       203 ~~~~~l~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~---~~~~~~~~DiwslG~il~~l~~g~~p~~~~~~~~~-~  278 (351)
                      ++.++|+|||.+.....      .....+++.|+|||.+.   ...++.++|||||||++|+|++|..||........ .
T Consensus       151 ~~~~kl~dfg~~~~~~~------~~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~  224 (308)
T cd06634         151 PGLVKLGDFGSASIMAP------ANXFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALY  224 (308)
T ss_pred             CCcEEECCcccceeecC------cccccCCccccCHHHHhhcccCCCCcccchHHHHHHHHHHHcCCCCCccccHHHHHH
Confidence            77899999998754321      12345788999999974   34568899999999999999999999865432110 0


Q ss_pred             ceeeecCcc-hhhhhHHHHHHHHHHHHhcCCCCCChHHHHHHHHHHH
Q 018699          279 GLVYLPKLS-FKRYWKVELWKSLFTNLLNMSSGNDKEVLQNLQKSFQ  324 (351)
Q Consensus       279 ~~~~~~~~~-~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~~~~~  324 (351)
                      ......... .+..++ ..+++||.+||.++|++||++.+++.|+|.
T Consensus       225 ~~~~~~~~~~~~~~~~-~~~~~li~~cl~~~P~~Rp~~~~ll~~~~~  270 (308)
T cd06634         225 HIAQNESPALQSGHWS-EYFRNFVDSCLQKIPQDRPTSEVLLKHRFV  270 (308)
T ss_pred             HHhhcCCCCcCccccc-HHHHHHHHHHhhCCcccCCCHHHHhhCccc
Confidence            000001111 122334 778999999999999999999999999873

Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin

>cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase

Probab=100.00  E-value=1.7e-35  Score=259.44  Aligned_cols=245  Identities=12%  Similarity=0.091  Sum_probs=182.0

Q ss_pred             cCeeEEEEEEeeccCceEEEEEEecCCCCceEEEEecCCCCChHHHHHHHHHhhhccccccccccceeeecccCeeEEEE
Q 018699           46 GGKKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFPWEFYMYRQLDQRISGRERSSFGFAHRIHLYSDYSILVC  125 (351)
Q Consensus        46 ~~~~Y~i~~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~  125 (351)
                      ..++|++.+.||+|+||.||++.   .+++.||+|.+..+...+ ....+ ........++++......... +..++||
T Consensus         4 ~~~~~~~~~~lg~g~~g~v~~~~---~~~~~~~iK~~~~~~~~~-~~~~e-~~~l~~~~~~~i~~~~~~~~~-~~~~~v~   77 (254)
T cd05083           4 NLQKLTLGEIIGEGEFGAVLQGE---YTGQKVAVKNIKCDVTAQ-AFLEE-TAVMTKLHHKNLVRLLGVILH-NGLYIVM   77 (254)
T ss_pred             cHHHceeeeeeccCCCCceEecc---cCCCceEEEeecCcchHH-HHHHH-HHHHHhCCCCCcCeEEEEEcC-CCcEEEE
Confidence            45789999999999999999987   356789999987653321 12222 223344556777777666544 4579999


Q ss_pred             EecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeeccCCCCCcccCC
Q 018699          126 DYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSGPWQDQG  205 (351)
Q Consensus       126 e~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~~~~~~~~~~  205 (351)
                      ||+++++|.+++....  ...+++..++.++.|++.|+.|||+.|++||||+|+||+++                 .++.
T Consensus        78 e~~~~~~L~~~l~~~~--~~~~~~~~~~~~~~qi~~al~~lH~~~~~H~dl~p~nili~-----------------~~~~  138 (254)
T cd05083          78 ELMSKGNLVNFLRTRG--RALVSVIQLLQFSLDVAEGMEYLESKKLVHRDLAARNILVS-----------------EDGV  138 (254)
T ss_pred             ECCCCCCHHHHHHhcC--cCCCCHHHHHHHHHHHHHHHHHHHhCCeeccccCcceEEEc-----------------CCCc
Confidence            9999999999997642  34578899999999999999999999999999999999998                 6778


Q ss_pred             eEEeecCCccccccCCCCccccccccCCCcccceeccCCCCCccchHhHHHHHHHHHHh-CccccccccCCCCCce-eee
Q 018699          206 LCLVDWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQEKKPWKFQVDTYGLCAIVHMMLH-NSYMEIEKKASPDGGL-VYL  283 (351)
Q Consensus       206 ~~l~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~-g~~p~~~~~~~~~~~~-~~~  283 (351)
                      ++|+|||.+.....     .......+..|+|||.+.+..++.++|+|||||++|+|++ |..||........... ...
T Consensus       139 ~kl~Dfg~~~~~~~-----~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~  213 (254)
T cd05083         139 AKVSDFGLARVGSM-----GVDNSKLPVKWTAPEALKHKKFSSKSDVWSYGVLLWEVFSYGRAPYPKMSLKEVKECVEKG  213 (254)
T ss_pred             EEECCCccceeccc-----cCCCCCCCceecCHHHhccCCcCchhhHHHHHHHHHHHHhCCCCCCccCCHHHHHHHHhCC
Confidence            99999998854221     1122234567999999988888999999999999999997 8988864432100000 000


Q ss_pred             cCcchhhhhHHHHHHHHHHHHhcCCCCCChHHHHHHHH
Q 018699          284 PKLSFKRYWKVELWKSLFTNLLNMSSGNDKEVLQNLQK  321 (351)
Q Consensus       284 ~~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~~  321 (351)
                      .....+...+ ..+.+++.+||+.+|+.||++.+++..
T Consensus       214 ~~~~~~~~~~-~~~~~li~~~l~~~p~~Rp~~~~l~~~  250 (254)
T cd05083         214 YRMEPPEGCP-ADVYVLMTSCWETEPKKRPSFHKLREK  250 (254)
T ss_pred             CCCCCCCcCC-HHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence            0111112223 778999999999999999999998764

Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki

>cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15

Probab=100.00  E-value=1.8e-35  Score=270.05  Aligned_cols=255  Identities=22%  Similarity=0.274  Sum_probs=186.8

Q ss_pred             CeeEEEEEEeeccCceEEEEEEecCCCCceEEEEecCCCCCh--H-HHHHHHHHhhhccc-cccccccceeeecc--cCe
Q 018699           47 GKKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFPW--E-FYMYRQLDQRISGR-ERSSFGFAHRIHLY--SDY  120 (351)
Q Consensus        47 ~~~Y~i~~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~~~--e-~~~~~~~~~~~~~~-~~~~~~~~~~~~~~--~~~  120 (351)
                      .++|++.+.||+|++|.||+|. +..+++.+|+|.+......  . ....+++. ..... .|+++.....++..  +..
T Consensus         6 ~~~y~~~~~lg~g~~~~v~~~~-~~~~~~~~~vK~~~~~~~~~~~~~~~~~E~~-~l~~l~~h~ni~~~~~~~~~~~~~~   83 (337)
T cd07852           6 LRKYEILQKLGKGAYGIVWKAI-DRRTKEVVALKKIFDAFRNATDAQRTFREIM-FLQELGDHPNIVKLLNVIKAENDKD   83 (337)
T ss_pred             hhHHHHhHhhcCCCCeeEEEEE-EcCCCeEEEEEeeccccCcchhhhhhhHHHH-HHHHhcCCCCccceeeeeccCCCce
Confidence            4689999999999999999999 5677899999987543221  1 11222222 22333 67777777776543  446


Q ss_pred             eEEEEEecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeeccCCCCC
Q 018699          121 SILVCDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSGP  200 (351)
Q Consensus       121 ~~lv~e~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~~~~~  200 (351)
                      .|+||||+. ++|..++..     ..+++..++.++.|++.||.|||+.||+|+||+|+||+++                
T Consensus        84 ~~lv~e~~~-~~L~~~~~~-----~~~~~~~~~~i~~qi~~~L~~LH~~~i~H~dl~p~nill~----------------  141 (337)
T cd07852          84 IYLVFEYME-TDLHAVIRA-----NILEDVHKRYIMYQLLKALKYIHSGNVIHRDLKPSNILLN----------------  141 (337)
T ss_pred             EEEEecccc-cCHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEc----------------
Confidence            899999995 699888865     3778889999999999999999999999999999999999                


Q ss_pred             cccCCeEEeecCCccccccCCCC---ccccccccCCCcccceeccC-CCCCccchHhHHHHHHHHHHhCccccccccCCC
Q 018699          201 WQDQGLCLVDWGRGIDLHLFPDN---MEFEGDCRTSGFRCIEMQEK-KPWKFQVDTYGLCAIVHMMLHNSYMEIEKKASP  276 (351)
Q Consensus       201 ~~~~~~~l~Dfg~a~~~~~~~~~---~~~~~~~g~~~y~aPE~~~~-~~~~~~~DiwslG~il~~l~~g~~p~~~~~~~~  276 (351)
                       .++.++|+|||.+.........   .......++..|+|||.+.+ ..++.++||||||+++|+|++|..||.......
T Consensus       142 -~~~~~kl~d~g~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~el~tg~~pf~~~~~~~  220 (337)
T cd07852         142 -SDCRVKLADFGLARSLSELEENPENPVLTDYVATRWYRAPEILLGSTRYTKGVDMWSVGCILGEMLLGKPLFPGTSTLN  220 (337)
T ss_pred             -CCCcEEEeeccchhccccccccccCcchhcccccccccCceeeeccccccccchHHHHHHHHHHHHhCCCCCCCCChHH
Confidence             7788999999988654322111   22334567889999998755 557899999999999999999999985332110


Q ss_pred             C--------C--------------------ceeeecC---cchhhhhHHHHHHHHHHHHhcCCCCCChHHHHHHHHHHHH
Q 018699          277 D--------G--------------------GLVYLPK---LSFKRYWKVELWKSLFTNLLNMSSGNDKEVLQNLQKSFQD  325 (351)
Q Consensus       277 ~--------~--------------------~~~~~~~---~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~~~~~~  325 (351)
                      .        +                    .......   .......+ ..+.++|.+||+.||++||++.++++|+|..
T Consensus       221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~l~~li~~~l~~~P~~Rps~~~il~~~~~~  299 (337)
T cd07852         221 QLEKIIEVIGPPSAEDIESIKSPFAATMLDSLPSRPRKPLDELLPKAS-DDALDLLKKLLVFNPNKRLTAEEALEHPYVA  299 (337)
T ss_pred             HHHHHHHHhCCCCHHHHHHHHhhhHHHhhhhcccccccchhhhccCCC-HHHHHHHHHhccCCcccccCHHHHhhChhhh
Confidence            0        0                    0000000   00001122 6789999999999999999999999998755


Q ss_pred             HH
Q 018699          326 YL  327 (351)
Q Consensus       326 ~~  327 (351)
                      .+
T Consensus       300 ~~  301 (337)
T cd07852         300 QF  301 (337)
T ss_pred             hh
Confidence            44

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul

>cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase

Probab=100.00  E-value=2.5e-35  Score=269.93  Aligned_cols=249  Identities=19%  Similarity=0.243  Sum_probs=185.0

Q ss_pred             cCeeEEEEEEeeccCceEEEEEEecCCCCceEEEEecCCCCChH---HHHHHHHHhhhccccccccccceeeecc-----
Q 018699           46 GGKKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFPWE---FYMYRQLDQRISGRERSSFGFAHRIHLY-----  117 (351)
Q Consensus        46 ~~~~Y~i~~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~~~e---~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----  117 (351)
                      ..++|++.+.||+|+||.||+|. +..+++.||+|++.......   ....++ ........|+++.....+...     
T Consensus        15 ~~~~y~~~~~lg~G~~g~v~~~~-~~~~~~~vaiK~~~~~~~~~~~~~~~~~E-i~~l~~l~h~~iv~~~~~~~~~~~~~   92 (345)
T cd07877          15 VPERYQNLSPVGSGAYGSVCAAF-DTKTGLRVAVKKLSRPFQSIIHAKRTYRE-LRLLKHMKHENVIGLLDVFTPARSLE   92 (345)
T ss_pred             ccCceEEEEEeeecCCeEEEEEE-EcCCCeEEEEEEecCcchhhHHHHHHHHH-HHHHHHcCCCcccceeeeeeeccccc
Confidence            35789999999999999999999 56778999999987643221   112222 223444566777766655432     


Q ss_pred             -cCeeEEEEEecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeeccC
Q 018699          118 -SDYSILVCDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHD  196 (351)
Q Consensus       118 -~~~~~lv~e~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~  196 (351)
                       ....|++++++ +++|.+++..     ..+++..++.++.|++.|+.|||++||+|+||+|+||+++            
T Consensus        93 ~~~~~~lv~~~~-~~~L~~~~~~-----~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIll~------------  154 (345)
T cd07877          93 EFNDVYLVTHLM-GADLNNIVKC-----QKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN------------  154 (345)
T ss_pred             ccccEEEEehhc-ccCHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCChHHEEEc------------
Confidence             23468888887 8899888764     4689999999999999999999999999999999999999            


Q ss_pred             CCCCcccCCeEEeecCCccccccCCCCccccccccCCCcccceeccC-CCCCccchHhHHHHHHHHHHhCccccccccCC
Q 018699          197 RSGPWQDQGLCLVDWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQEK-KPWKFQVDTYGLCAIVHMMLHNSYMEIEKKAS  275 (351)
Q Consensus       197 ~~~~~~~~~~~l~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~~DiwslG~il~~l~~g~~p~~~~~~~  275 (351)
                           .++.++|+|||++....     .......++..|+|||.+.+ ..++.++||||+||++|+|++|..||......
T Consensus       155 -----~~~~~kl~dfg~~~~~~-----~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~~~~  224 (345)
T cd07877         155 -----EDCELKILDFGLARHTD-----DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHI  224 (345)
T ss_pred             -----CCCCEEEeccccccccc-----ccccccccCCCccCHHHHhCccCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH
Confidence                 67789999999886432     12233467889999999866 56788999999999999999999998543221


Q ss_pred             CCCc------------------------e----eeecCcchhh---hhHHHHHHHHHHHHhcCCCCCChHHHHHHHHHHH
Q 018699          276 PDGG------------------------L----VYLPKLSFKR---YWKVELWKSLFTNLLNMSSGNDKEVLQNLQKSFQ  324 (351)
Q Consensus       276 ~~~~------------------------~----~~~~~~~~~~---~~~~~~~~~li~~~L~~dP~~R~s~~e~l~~~~~  324 (351)
                      ....                        +    ...+......   ..+ +.+.+||.+||++||.+||++.++++|+|.
T Consensus       225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~li~~~L~~dp~~R~t~~e~l~h~~f  303 (345)
T cd07877         225 DQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGAN-PLAVDLLEKMLVLDSDKRITAAQALAHAYF  303 (345)
T ss_pred             HHHHHHHHHhCCCCHHHHhhcccHhHHHHHHHhcccCCcchhhhcCCCC-HHHHHHHHHHcCCChhhcCCHHHHhcChhh
Confidence            0000                        0    0000001110   112 678999999999999999999999999875


Q ss_pred             H
Q 018699          325 D  325 (351)
Q Consensus       325 ~  325 (351)
                      .
T Consensus       304 ~  304 (345)
T cd07877         304 A  304 (345)
T ss_pred             h
Confidence            4

Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14

>KOG0670 consensus U4/U6-associated splicing factor PRP4 [RNA processing and modification]

Probab=100.00  E-value=6.8e-37  Score=273.78  Aligned_cols=259  Identities=19%  Similarity=0.249  Sum_probs=198.0

Q ss_pred             EEEEcCeeEEEEEEeeccCceEEEEEEecCCCCceEEEEecCCC------CChHHHHHHHHHhhhccccccccccceeee
Q 018699           42 TIEIGGKKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPA------FPWEFYMYRQLDQRISGRERSSFGFAHRIH  115 (351)
Q Consensus        42 ~~~i~~~~Y~i~~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~------~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~  115 (351)
                      .-++...+|++....|+|-||+|..|. +...|..||||++...      -..|.++++.+...-......+ ..+...+
T Consensus       426 igE~LD~RY~V~~~~GkGvFs~Vvra~-D~~r~~~vAiKIIRnNE~M~KtGl~EleiLkKL~~AD~Edk~Hc-lrl~r~F  503 (752)
T KOG0670|consen  426 IGELLDSRYEVQGYTGKGVFSTVVRAR-DQARGQEVAIKIIRNNEVMHKTGLKELEILKKLNDADPEDKFHC-LRLFRHF  503 (752)
T ss_pred             hhhhhcceeEEEeccccceeeeeeecc-ccCCCCeeEEEEeecchHHhhhhhHHHHHHHHhhccCchhhhHH-HHHHHHh
Confidence            345567999999999999999999999 5777889999998743      3346677776665433333322 2233345


Q ss_pred             cccCeeEEEEEecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeecc
Q 018699          116 LYSDYSILVCDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDH  195 (351)
Q Consensus       116 ~~~~~~~lv~e~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~  195 (351)
                      ...+.+|+|+|-+ ..+|.+.+.++.. +-.|....++.++.|+..||..|-.-||+|.||||+|||++.          
T Consensus       504 ~hknHLClVFE~L-slNLRevLKKyG~-nvGL~ikaVRsYaqQLflALklLK~c~vlHaDIKPDNiLVNE----------  571 (752)
T KOG0670|consen  504 KHKNHLCLVFEPL-SLNLREVLKKYGR-NVGLHIKAVRSYAQQLFLALKLLKKCGVLHADIKPDNILVNE----------  571 (752)
T ss_pred             hhcceeEEEehhh-hchHHHHHHHhCc-ccceeehHHHHHHHHHHHHHHHHHhcCeeecccCccceEecc----------
Confidence            5688999999999 7899999999843 446788999999999999999999999999999999999995          


Q ss_pred             CCCCCcccCCeEEeecCCccccccCCCCccccccccCCCcccceeccCCCCCccchHhHHHHHHHHHHhCccccccccCC
Q 018699          196 DRSGPWQDQGLCLVDWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQEKKPWKFQVDTYGLCAIVHMMLHNSYMEIEKKAS  275 (351)
Q Consensus       196 ~~~~~~~~~~~~l~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~p~~~~~~~  275 (351)
                            +..++||||||.|...+    .+...++.-+.-|.|||++.|.+|+...|+||.||+||||.||...|...+..
T Consensus       572 ------~k~iLKLCDfGSA~~~~----eneitPYLVSRFYRaPEIiLG~~yd~~iD~WSvgctLYElYtGkIlFpG~TNN  641 (752)
T KOG0670|consen  572 ------SKNILKLCDFGSASFAS----ENEITPYLVSRFYRAPEIILGLPYDYPIDTWSVGCTLYELYTGKILFPGRTNN  641 (752)
T ss_pred             ------CcceeeeccCccccccc----cccccHHHHHHhccCcceeecCcccCCccceeeceeeEEeeccceecCCCCcH
Confidence                  45679999999885432    45566666677899999999999999999999999999999998766433221


Q ss_pred             -----------------------------------------CCCce---ee---ecCcc----------hhh--hhHHHH
Q 018699          276 -----------------------------------------PDGGL---VY---LPKLS----------FKR--YWKVEL  296 (351)
Q Consensus       276 -----------------------------------------~~~~~---~~---~~~~~----------~~~--~~~~~~  296 (351)
                                                               .+...   ++   .|...          +|.  .-....
T Consensus       642 ~MLrl~me~KGk~p~KmlRKgqF~dqHFD~d~nf~~~e~D~vT~r~~~~vm~~vkPtkdl~s~l~~~q~~~deq~~~~~~  721 (752)
T KOG0670|consen  642 QMLRLFMELKGKFPNKMLRKGQFKDQHFDQDLNFLYIEVDKVTEREKRTVMVNVKPTKDLGSELIAVQRLPDEQPKIVQQ  721 (752)
T ss_pred             HHHHHHHHhcCCCcHHHhhhcchhhhhcccccceEEEeccccccceeEEEecccCcchhHHHHHhccCCCCchhHHHHHH
Confidence                                                     00000   00   01000          111  011267


Q ss_pred             HHHHHHHHhcCCCCCChHHHHHHHHHHH
Q 018699          297 WKSLFTNLLNMSSGNDKEVLQNLQKSFQ  324 (351)
Q Consensus       297 ~~~li~~~L~~dP~~R~s~~e~l~~~~~  324 (351)
                      +++|+.+||..||++|.|..|+|.|||.
T Consensus       722 ~rdLLdkml~LdP~KRit~nqAL~HpFi  749 (752)
T KOG0670|consen  722 LRDLLDKMLILDPEKRITVNQALKHPFI  749 (752)
T ss_pred             HHHHHHHHhccChhhcCCHHHHhcCCcc
Confidence            8999999999999999999999999985

>cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2

Probab=100.00  E-value=1.3e-34  Score=255.90  Aligned_cols=249  Identities=14%  Similarity=0.092  Sum_probs=175.0

Q ss_pred             EEeeccCceEEEEEEec-CCCCceEEEEecCCCCCh-HHHHHHHHHhhhccccccccccceeeecccCeeEEEEEecCCC
Q 018699           54 GCAGQGGFAKVFKAYVN-GDPEDVVALKIQKPAFPW-EFYMYRQLDQRISGRERSSFGFAHRIHLYSDYSILVCDYLSQG  131 (351)
Q Consensus        54 ~~lg~G~~g~V~~a~~~-~~~~~~vaiK~~~~~~~~-e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~  131 (351)
                      +.||+|+||.||+|.+. ......+++|.+...... +...............|++++.....+......|+||||++++
T Consensus         1 ~~lg~G~~g~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~   80 (268)
T cd05086           1 QEIGNGWFGKVLLSEIYTDTGVARVVVKELKANASSKEQNEFLQQGDPYRILQHPNILQCLGQCVEAIPYLLVFEYCELG   80 (268)
T ss_pred             CcCCCCcCceEEEEEEEcCCCcceEEEEEecCCCChHHHHHHHHHHHHHhccCCcchhheEEEecCCCccEEEEecCCCC
Confidence            36999999999999742 223456778876654321 2222222223344567888888888887788899999999999


Q ss_pred             CHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeeccCCCCCcccCCeEEeec
Q 018699          132 TLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSGPWQDQGLCLVDW  211 (351)
Q Consensus       132 sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~~~~~~~~~~~~l~Df  211 (351)
                      +|.+++.........++...+..++.||+.||+|||+.+++|+||+|+||+++                 .++.++|+||
T Consensus        81 ~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~H~dikp~nil~~-----------------~~~~~~l~Df  143 (268)
T cd05086          81 DLKSYLSQEQWHRRNSQLLLLQRMACEIAAGVTHMHKHNFLHSDLALRNCFLT-----------------SDLTVKVGDY  143 (268)
T ss_pred             cHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHCCeeccCCccceEEEc-----------------CCccEEeccc
Confidence            99999986432224567778889999999999999999999999999999998                 6778999999


Q ss_pred             CCccccccCCCCccccccccCCCcccceeccC-------CCCCccchHhHHHHHHHHHHhC-ccccccccCCC------C
Q 018699          212 GRGIDLHLFPDNMEFEGDCRTSGFRCIEMQEK-------KPWKFQVDTYGLCAIVHMMLHN-SYMEIEKKASP------D  277 (351)
Q Consensus       212 g~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~-------~~~~~~~DiwslG~il~~l~~g-~~p~~~~~~~~------~  277 (351)
                      |.+................++..|+|||++..       ..++.++|||||||++|+|+++ ..||.......      .
T Consensus       144 g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~~~~~~~~  223 (268)
T cd05086         144 GIGPSRYKEDYIETEDDKCVPLRWLAPELVGEFHGGLITAEQTKPSNVWALGVTLWELFENAAQPYSHLSDREVLNHVIK  223 (268)
T ss_pred             ccccccCcchhhhcccCCcCcccccCchhcccccCccccCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHh
Confidence            98743211110111223457888999998743       2456889999999999999975 56764332210      0


Q ss_pred             CceeeecCcchhhhhHHHHHHHHHHHHhcCCCCCChHHHHHHHH
Q 018699          278 GGLVYLPKLSFKRYWKVELWKSLFTNLLNMSSGNDKEVLQNLQK  321 (351)
Q Consensus       278 ~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~~  321 (351)
                      ........+..+..++ +.+.+++..|| .+|++||++.++++.
T Consensus       224 ~~~~~~~~~~~~~~~~-~~~~~l~~~c~-~~P~~Rp~~~~i~~~  265 (268)
T cd05086         224 DQQVKLFKPQLELPYS-ERWYEVLQFCW-LSPEKRATAEEVHRL  265 (268)
T ss_pred             hcccccCCCccCCCCc-HHHHHHHHHHh-hCcccCCCHHHHHHH
Confidence            0001111222223344 77889999999 679999999998753

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage

>cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases

Probab=100.00  E-value=3.8e-35  Score=259.60  Aligned_cols=246  Identities=13%  Similarity=0.096  Sum_probs=176.9

Q ss_pred             EEeeccCceEEEEEEecCCCCc--eEEEEecCCCCCh-HHHHHHHHHhhhccc-cccccccceeeecccCeeEEEEEecC
Q 018699           54 GCAGQGGFAKVFKAYVNGDPED--VVALKIQKPAFPW-EFYMYRQLDQRISGR-ERSSFGFAHRIHLYSDYSILVCDYLS  129 (351)
Q Consensus        54 ~~lg~G~~g~V~~a~~~~~~~~--~vaiK~~~~~~~~-e~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~lv~e~~~  129 (351)
                      +.||+|+||.||+|++ ..++.  .+++|.+...... ....+......+... .|+++......+...+..+++|||++
T Consensus         1 ~~lg~g~~g~v~~~~~-~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e~~~   79 (270)
T cd05047           1 DVIGEGNFGQVLKARI-KKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAP   79 (270)
T ss_pred             CcCCCCCCceEEEEEE-cCCCCeeEEEEEEccccCCHHHHHHHHHHHHHHHhhccCCCeeeEEEEEecCCCceEEEEeCC
Confidence            3689999999999995 44443  5688887743221 111222222222233 67788888888877888999999999


Q ss_pred             CCCHHHHHHHHHh------------hCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeeccCC
Q 018699          130 QGTLQDAINSYVV------------IGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDR  197 (351)
Q Consensus       130 ~~sL~~~l~~~~~------------~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~~  197 (351)
                      +++|.+++.....            ....+++..++.++.|++.|++|||++|++|+||+|+||+++             
T Consensus        80 ~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~al~~lH~~~i~H~dikp~nili~-------------  146 (270)
T cd05047          80 HGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVG-------------  146 (270)
T ss_pred             CCcHHHHHHhccccccccccccccCCcCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccccceEEEc-------------
Confidence            9999999876321            012478899999999999999999999999999999999999             


Q ss_pred             CCCcccCCeEEeecCCccccccCCCCccccccccCCCcccceeccCCCCCccchHhHHHHHHHHHHh-CccccccccCCC
Q 018699          198 SGPWQDQGLCLVDWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQEKKPWKFQVDTYGLCAIVHMMLH-NSYMEIEKKASP  276 (351)
Q Consensus       198 ~~~~~~~~~~l~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~-g~~p~~~~~~~~  276 (351)
                          .++.++|+|||++......   ........+..|+|||.+.+..++.++|||||||++|+|++ |..||.......
T Consensus       147 ----~~~~~kl~dfgl~~~~~~~---~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~el~~~g~~pf~~~~~~~  219 (270)
T cd05047         147 ----ENYVAKIADFGLSRGQEVY---VKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAE  219 (270)
T ss_pred             ----CCCeEEECCCCCccccchh---hhccCCCCccccCChHHHccCCCCchhhHHHHHHHHHHHHcCCCCCccccCHHH
Confidence                6778999999987432111   00111123557999999988888999999999999999996 999986433210


Q ss_pred             CCc-eeeecCcchhhhhHHHHHHHHHHHHhcCCCCCChHHHHHHHH
Q 018699          277 DGG-LVYLPKLSFKRYWKVELWKSLFTNLLNMSSGNDKEVLQNLQK  321 (351)
Q Consensus       277 ~~~-~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~~  321 (351)
                      ... .........+...+ ..+.+++.+||..||.+||++.+++..
T Consensus       220 ~~~~~~~~~~~~~~~~~~-~~~~~li~~~l~~~p~~Rps~~~il~~  264 (270)
T cd05047         220 LYEKLPQGYRLEKPLNCD-DEVYDLMRQCWREKPYERPSFAQILVS  264 (270)
T ss_pred             HHHHHhCCCCCCCCCcCC-HHHHHHHHHHcccChhhCCCHHHHHHH
Confidence            000 00001111222233 678999999999999999999999864

Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l

>cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase

Probab=100.00  E-value=5.8e-35  Score=267.23  Aligned_cols=247  Identities=23%  Similarity=0.314  Sum_probs=181.5

Q ss_pred             CeeEEEEEEeeccCceEEEEEEecCCCCceEEEEecCCCCChH---HHHHHHHHhhhccccccccccceeeeccc-----
Q 018699           47 GKKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFPWE---FYMYRQLDQRISGRERSSFGFAHRIHLYS-----  118 (351)
Q Consensus        47 ~~~Y~i~~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~~~e---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----  118 (351)
                      .++|.+.+.||.|++|.||+|. +..+|+.||+|.+......+   ....+++ .......|+++.....++...     
T Consensus        14 ~~~y~~~~~ig~g~~g~v~~~~-~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~-~~l~~l~h~niv~~~~~~~~~~~~~~   91 (342)
T cd07879          14 PERYTSLKQVGSGAYGSVCSAI-DKRTGEKVAIKKLSRPFQSEIFAKRAYREL-TLLKHMQHENVIGLLDVFTSAVSGDE   91 (342)
T ss_pred             ccceEEEEEeeecCCeEEEEEE-eCCCCcEEEEEEecCccccccchhHHHHHH-HHHHhcCCCCccchhheecccccCCC
Confidence            4689999999999999999999 56778999999987543221   1122222 233344567777666655432     


Q ss_pred             -CeeEEEEEecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeeccCC
Q 018699          119 -DYSILVCDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDR  197 (351)
Q Consensus       119 -~~~~lv~e~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~~  197 (351)
                       ...++|+||+. .+|..++      +..+++..+..++.|++.|++|||++|++||||+|+||+++             
T Consensus        92 ~~~~~lv~e~~~-~~l~~~~------~~~~~~~~~~~~~~qi~~aL~~LH~~~i~H~dlkp~NIll~-------------  151 (342)
T cd07879          92 FQDFYLVMPYMQ-TDLQKIM------GHPLSEDKVQYLVYQMLCGLKYIHSAGIIHRDLKPGNLAVN-------------  151 (342)
T ss_pred             CceEEEEecccc-cCHHHHH------cCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEC-------------
Confidence             34689999994 5776654      34688999999999999999999999999999999999999             


Q ss_pred             CCCcccCCeEEeecCCccccccCCCCccccccccCCCcccceeccC-CCCCccchHhHHHHHHHHHHhCccccccccCCC
Q 018699          198 SGPWQDQGLCLVDWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQEK-KPWKFQVDTYGLCAIVHMMLHNSYMEIEKKASP  276 (351)
Q Consensus       198 ~~~~~~~~~~l~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~~DiwslG~il~~l~~g~~p~~~~~~~~  276 (351)
                          .++.++|+|||++....     .......++..|+|||.+.+ ..++.++|+|||||++|+|++|..||.......
T Consensus       152 ----~~~~~kL~dfg~~~~~~-----~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slGvil~el~~g~~pf~~~~~~~  222 (342)
T cd07879         152 ----EDCELKILDFGLARHAD-----AEMTGYVVTRWYRAPEVILNWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLD  222 (342)
T ss_pred             ----CCCCEEEeeCCCCcCCC-----CCCCCceeeecccChhhhcCccccCchHHHHHHHHHHHHHHhCCCCCCCCCHHH
Confidence                77889999999886432     11223456888999999865 467899999999999999999999997543110


Q ss_pred             C------------------------Cce----eeecCcchhh---hhHHHHHHHHHHHHhcCCCCCChHHHHHHHHHHHH
Q 018699          277 D------------------------GGL----VYLPKLSFKR---YWKVELWKSLFTNLLNMSSGNDKEVLQNLQKSFQD  325 (351)
Q Consensus       277 ~------------------------~~~----~~~~~~~~~~---~~~~~~~~~li~~~L~~dP~~R~s~~e~l~~~~~~  325 (351)
                      .                        ..+    ...+......   ..+ ..+.+||.+||+.||.+||++.+++.|+|..
T Consensus       223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~li~~~l~~dP~~R~~~~e~l~h~~f~  301 (342)
T cd07879         223 QLTQILKVTGVPGPEFVQKLEDKAAKSYIKSLPKYPRKDFSTLFPKAS-PQAVDLLEKMLELDVDKRLTATEALEHPYFD  301 (342)
T ss_pred             HHHHHHHhcCCCCHHHHHHhcccchHHHHhhcCCcccchHHHHhcCCC-HHHHHHHHHHcCCChhhCcCHHHHhcCcchh
Confidence            0                        000    0000111110   122 5688999999999999999999999987643

Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13

>cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12

Probab=100.00  E-value=6.6e-35  Score=262.19  Aligned_cols=253  Identities=17%  Similarity=0.186  Sum_probs=183.1

Q ss_pred             cCeeEEEEEEeeccCceEEEEEEecCCCCceEEEEecCCCCCh---HHHHHHHHHhhhccccccccccceeeeccc----
Q 018699           46 GGKKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFPW---EFYMYRQLDQRISGRERSSFGFAHRIHLYS----  118 (351)
Q Consensus        46 ~~~~Y~i~~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~~~---e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----  118 (351)
                      ..++|++.+.||.|++|+||+|. ...+++.||+|.+......   ......++ .......++++.....+....    
T Consensus         5 ~~~~~~~~~~lg~g~~g~v~~~~-~~~~~~~v~iK~~~~~~~~~~~~~~~~~e~-~~~~~l~h~~i~~~~~~~~~~~~~~   82 (302)
T cd07864           5 CVDKFDIIGQIGEGTYGQVYKAR-DKDTGELVALKKVRLDNEKEGFPITAIREI-KILRQLNHRNIVNLKEIVTDKQDAL   82 (302)
T ss_pred             hhhhhheeeeecccCCEEEEEEE-ECCCCcEEEEEEEeecccccCchHHHHHHH-HHHHhCCCCCeeeeeheecCcchhh
Confidence            45789999999999999999999 4667899999998654221   11111221 222334566777666655433    


Q ss_pred             ------CeeEEEEEecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCccee
Q 018699          119 ------DYSILVCDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTV  192 (351)
Q Consensus       119 ------~~~~lv~e~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~  192 (351)
                            +..++|+||+++ ++...+...   ...+++..++.++.|++.||+|||+.||+|+||+|+||+++        
T Consensus        83 ~~~~~~~~~~lv~e~~~~-~l~~~l~~~---~~~~~~~~~~~i~~qi~~aL~~LH~~~i~H~dl~p~nili~--------  150 (302)
T cd07864          83 DFKKDKGAFYLVFEYMDH-DLMGLLESG---LVHFSEDHIKSFMKQLLEGLNYCHKKNFLHRDIKCSNILLN--------  150 (302)
T ss_pred             hccccCCcEEEEEcccCc-cHHHHHhcC---CCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEC--------
Confidence                  378999999965 777777653   34689999999999999999999999999999999999999        


Q ss_pred             eccCCCCCcccCCeEEeecCCccccccCCCCccccccccCCCcccceeccC-CCCCccchHhHHHHHHHHHHhCcccccc
Q 018699          193 LDHDRSGPWQDQGLCLVDWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQEK-KPWKFQVDTYGLCAIVHMMLHNSYMEIE  271 (351)
Q Consensus       193 ~~~~~~~~~~~~~~~l~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~~DiwslG~il~~l~~g~~p~~~  271 (351)
                               .++.++|+|||.+........ .......++..|+|||.+.+ ..++.++|||||||++|+|++|.+||..
T Consensus       151 ---------~~~~~kl~dfg~~~~~~~~~~-~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~~~el~~g~~~~~~  220 (302)
T cd07864         151 ---------NKGQIKLADFGLARLYNSEES-RPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGELFTKKPIFQA  220 (302)
T ss_pred             ---------CCCcEEeCcccccccccCCcc-cccccceeccCccChHHhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCC
Confidence                     778899999998864322111 11222345778999998865 4568899999999999999999999864


Q ss_pred             ccCCCC-------------Ccee-------e---ecCc-------chhhhhHHHHHHHHHHHHhcCCCCCChHHHHHHHH
Q 018699          272 KKASPD-------------GGLV-------Y---LPKL-------SFKRYWKVELWKSLFTNLLNMSSGNDKEVLQNLQK  321 (351)
Q Consensus       272 ~~~~~~-------------~~~~-------~---~~~~-------~~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~~  321 (351)
                      ......             ..+.       .   ....       ......+ ..+.++|.+||..||++||++.+++.|
T Consensus       221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~li~~~l~~~P~~Rp~~~~il~~  299 (302)
T cd07864         221 NQELAQLELISRLCGSPCPAVWPDVIKLPYFNTMKPKKQYRRRLREEFSFIP-TPALDLLDHMLTLDPSKRCTAEEALNS  299 (302)
T ss_pred             CChHHHHHHHHHHhCCCChhhcccccccccccccccccccccchhhhcCCCC-HHHHHHHHHHccCChhhCCCHHHHhcC
Confidence            332100             0000       0   0000       0001122 778999999999999999999999998


Q ss_pred             HH
Q 018699          322 SF  323 (351)
Q Consensus       322 ~~  323 (351)
                      +|
T Consensus       300 ~~  301 (302)
T cd07864         300 PW  301 (302)
T ss_pred             CC
Confidence            76

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely

>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase

Probab=100.00  E-value=7.3e-35  Score=286.85  Aligned_cols=133  Identities=23%  Similarity=0.306  Sum_probs=109.6

Q ss_pred             eeEEEEEEeeccCceEEEEEEecCCCCceEEEEecCCCCChH---HHHHHHHHhhhccccccccccceeeecccCeeEEE
Q 018699           48 KKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFPWE---FYMYRQLDQRISGRERSSFGFAHRIHLYSDYSILV  124 (351)
Q Consensus        48 ~~Y~i~~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~~~e---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv  124 (351)
                      ++|++.++||+|+||+||+|+ +..+++.||||++.......   ...+......+....+++++.........+..|+|
T Consensus         4 ~~y~i~~~LG~G~fg~Vy~a~-~~~~~~~vAiKvi~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lV   82 (669)
T cd05610           4 EEFVIVKPISRGAFGKVYLGR-KKNNSKLYAVKVVKKADMINKNMVHQVQAERDALALSKSPFIVHLYYSLQSANNVYLV   82 (669)
T ss_pred             CCEEEEEEEecCCCeEEEEEE-ECCCCcEEEEEEEehhhccCHHHHHHHHHHHHHHHhcCCCCcCeEEEEEEECCEEEEE
Confidence            589999999999999999999 56788999999987543221   12222222334455677888877777778899999


Q ss_pred             EEecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEee
Q 018699          125 CDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRY  185 (351)
Q Consensus       125 ~e~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~  185 (351)
                      |||+.+++|.+++..    ...+++..++.++.||+.||.|||++||+|+||||+||+++.
T Consensus        83 mEy~~g~~L~~li~~----~~~l~~~~~~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~  139 (669)
T cd05610          83 MEYLIGGDVKSLLHI----YGYFDEEMAVKYISEVALALDYLHRHGIIHRDLKPDNMLISN  139 (669)
T ss_pred             EeCCCCCCHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHhCCEEeCCccHHHEEEcC
Confidence            999999999999976    357889999999999999999999999999999999999983

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481

>KOG1187 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=1.9e-34  Score=262.25  Aligned_cols=247  Identities=19%  Similarity=0.249  Sum_probs=191.5

Q ss_pred             eeEEEEEEeeccCceEEEEEEecCCCCceEEEEecCCCCCh-HHHHHHHHHhhhccccccccccceeeecccC-eeEEEE
Q 018699           48 KKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFPW-EFYMYRQLDQRISGRERSSFGFAHRIHLYSD-YSILVC  125 (351)
Q Consensus        48 ~~Y~i~~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~~~-e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~lv~  125 (351)
                      ++|.-...||+|+||+||+|..  .++..||||.+...... +.+...++ ..+....|+|++.+.+++...+ ..++|+
T Consensus        75 ~~Fs~~~~ig~Ggfg~VYkG~l--~~~~~vAVK~~~~~~~~~~~eF~~Ei-~~ls~l~H~Nlv~LlGyC~e~~~~~~LVY  151 (361)
T KOG1187|consen   75 NNFSESNLIGEGGFGTVYKGVL--SDGTVVAVKRLSSNSGQGEREFLNEV-EILSRLRHPNLVKLLGYCLEGGEHRLLVY  151 (361)
T ss_pred             hCCchhcceecCCCeEEEEEEE--CCCCEEEEEEecCCCCcchhHHHHHH-HHHhcCCCcCcccEEEEEecCCceEEEEE
Confidence            6788889999999999999995  34489999988766544 44433333 3345556999999999998888 599999


Q ss_pred             EecCCCCHHHHHHHHHhhCC-ChhHHHHHHHHHHHHHHHHHHHHC---CceecCCCCCcEEEeecCCcceeeccCCCCCc
Q 018699          126 DYLSQGTLQDAINSYVVIGK-SMEEVLCIYYTIEMLCILESLHDV---GIIHGDFKPDNLLIRYARDELTVLDHDRSGPW  201 (351)
Q Consensus       126 e~~~~~sL~~~l~~~~~~~~-~l~~~~~~~i~~qi~~~l~~LH~~---~i~H~dl~p~Nill~~~~~~~~~~~~~~~~~~  201 (351)
                      ||+++|+|.+.+...   .. +++|.....|+.+++.||+|||+.   .|+||||||+|||+|                 
T Consensus       152 Eym~nGsL~d~L~~~---~~~~L~W~~R~kIa~g~A~gL~yLH~~~~~~iiHrDiKssNILLD-----------------  211 (361)
T KOG1187|consen  152 EYMPNGSLEDHLHGK---KGEPLDWETRLKIALGAARGLAYLHEGCPPPIIHRDIKSSNILLD-----------------  211 (361)
T ss_pred             EccCCCCHHHHhCCC---CCCCCCHHHHHHHHHHHHHHHHHHccCCCCCEecCCCCHHHeeEC-----------------
Confidence            999999999999874   23 889999999999999999999986   499999999999999                 


Q ss_pred             ccCCeEEeecCCccccccCCC-Ccccccc-ccCCCcccceeccCCCCCccchHhHHHHHHHHHHhCccccccccCCCC--
Q 018699          202 QDQGLCLVDWGRGIDLHLFPD-NMEFEGD-CRTSGFRCIEMQEKKPWKFQVDTYGLCAIVHMMLHNSYMEIEKKASPD--  277 (351)
Q Consensus       202 ~~~~~~l~Dfg~a~~~~~~~~-~~~~~~~-~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~p~~~~~~~~~--  277 (351)
                      .+...||+|||+|...   +. ....... .||.+|+|||....+..+.++||||+|+++.|+++|+.+.....+...  
T Consensus       212 ~~~~aKlsDFGLa~~~---~~~~~~~~~~~~gt~gY~~PEy~~~g~lt~KsDVySFGVvllElitgr~~~d~~~~~~~~~  288 (361)
T KOG1187|consen  212 EDFNAKLSDFGLAKLG---PEGDTSVSTTVMGTFGYLAPEYASTGKLTEKSDVYSFGVVLLELITGRKAVDQSRPRGELS  288 (361)
T ss_pred             CCCCEEccCccCcccC---CccccceeeecCCCCccCChhhhccCCcCcccccccchHHHHHHHhCCcccCCCCCccccc
Confidence            8889999999999532   22 2223333 799999999999888889999999999999999999976654321100  


Q ss_pred             -----------Cce--eeecCc---chhhhhHHHHHHHHHHHHhcCCCCCChHHHHHHH
Q 018699          278 -----------GGL--VYLPKL---SFKRYWKVELWKSLFTNLLNMSSGNDKEVLQNLQ  320 (351)
Q Consensus       278 -----------~~~--~~~~~~---~~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~  320 (351)
                                 +..  +..+..   ..+..-....+..+..+|+..+|..||++.|++.
T Consensus       289 l~~w~~~~~~~~~~~eiiD~~l~~~~~~~~~~~~~~~~~a~~C~~~~~~~RP~m~~Vv~  347 (361)
T KOG1187|consen  289 LVEWAKPLLEEGKLREIVDPRLKEGEYPDEKEVKKLAELALRCLRPDPKERPTMSQVVK  347 (361)
T ss_pred             HHHHHHHHHHCcchhheeCCCccCCCCChHHHHHHHHHHHHHHcCcCCCcCcCHHHHHH
Confidence                       111  122221   2221012256788999999999999999999744

>KOG0669 consensus Cyclin T-dependent kinase CDK9 [Cell cycle control, cell division, chromosome partitioning]

Probab=100.00  E-value=2.8e-37  Score=253.70  Aligned_cols=279  Identities=21%  Similarity=0.207  Sum_probs=204.3

Q ss_pred             EcCeeEEEEEEeeccCceEEEEEEecCCCCceEEEEecCCCCChHH---HHHHHHHhhhccccccccccceeeec-----
Q 018699           45 IGGKKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFPWEF---YMYRQLDQRISGRERSSFGFAHRIHL-----  116 (351)
Q Consensus        45 i~~~~Y~i~~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~~~e~---~~~~~~~~~~~~~~~~~~~~~~~~~~-----  116 (351)
                      ..++.|+-..+||+|.||.||+|+ ..++|+.||+|+..-+.+.+.   ..++.+ ..+....|.+++.+..++.     
T Consensus        14 ~~~~~yek~~kigqGtfgeVFkAr-~~n~~kkvalkkvlmeneKeGfpitalrei-kiL~~lkHenv~nliEic~tk~Tp   91 (376)
T KOG0669|consen   14 DEVSKYEKLAKIGQGTFGEVFKAR-SKNTGKKVALKKVLMENEKEGFPITALREI-KILQLLKHENVVNLIEICRTKATP   91 (376)
T ss_pred             ecchHHHHHHhcCCchHHHHHHHh-hcCccchhHHHHHHHhccccCCcHHHHHHH-HHHHHhcchhHHHHHHHHhhccCC
Confidence            346789999999999999999999 678888899987543222111   111111 1122334445555444432     


Q ss_pred             ---ccCeeEEEEEecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceee
Q 018699          117 ---YSDYSILVCDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVL  193 (351)
Q Consensus       117 ---~~~~~~lv~e~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~  193 (351)
                         +...+|+|+++|+ -+|.-++...   ...++..++..++++++.||.|+|...|+|||+|++|++++         
T Consensus        92 ~~r~r~t~ylVf~~ce-hDLaGlLsn~---~vr~sls~Ikk~Mk~Lm~GL~~iHr~kilHRDmKaaNvLIt---------  158 (376)
T KOG0669|consen   92 TNRDRATFYLVFDFCE-HDLAGLLSNR---KVRFSLSEIKKVMKGLMNGLYYIHRNKILHRDMKAANVLIT---------  158 (376)
T ss_pred             cccccceeeeeHHHhh-hhHHHHhcCc---cccccHHHHHHHHHHHHHHHHHHHHhhHHhhcccHhhEEEc---------
Confidence               2446899999995 4888888764   35789999999999999999999999999999999999999         


Q ss_pred             ccCCCCCcccCCeEEeecCCccccccCCC--CccccccccCCCcccceeccC-CCCCccchHhHHHHHHHHHHhCccccc
Q 018699          194 DHDRSGPWQDQGLCLVDWGRGIDLHLFPD--NMEFEGDCRTSGFRCIEMQEK-KPWKFQVDTYGLCAIVHMMLHNSYMEI  270 (351)
Q Consensus       194 ~~~~~~~~~~~~~~l~Dfg~a~~~~~~~~--~~~~~~~~g~~~y~aPE~~~~-~~~~~~~DiwslG~il~~l~~g~~p~~  270 (351)
                              .++++||+|||+++..+...+  ...+...+-|..|++||.+.| ..|+++.|||..|||+.+|++|.+-+.
T Consensus       159 --------~dgilklADFGlar~fs~~~n~~kprytnrvvTLwYrppEllLG~r~yg~~iDiWgAgCimaeMwtrspimq  230 (376)
T KOG0669|consen  159 --------KDGILKLADFGLARAFSTSKNVVKPRYTNRVVTLWYRPPELLLGDREYGPPIDIWGAGCIMAEMWTRSPIMQ  230 (376)
T ss_pred             --------CCceEEeeccccccceecccccCCCCcccceeeeecCCHHHhhcccccCCcchhHhHHHHHHHHHccCcccc
Confidence                    889999999999976553322  223445567999999999876 678999999999999999999987665


Q ss_pred             cccCCCC--------Cce---eeec-----------Ccchh------------hhhHHHHHHHHHHHHhcCCCCCChHHH
Q 018699          271 EKKASPD--------GGL---VYLP-----------KLSFK------------RYWKVELWKSLFTNLLNMSSGNDKEVL  316 (351)
Q Consensus       271 ~~~~~~~--------~~~---~~~~-----------~~~~~------------~~~~~~~~~~li~~~L~~dP~~R~s~~  316 (351)
                      ..+....        +..   .++.           ..+++            .+..++...+|+.+||..||.+|+.+.
T Consensus       231 gnteqqql~~Is~LcGs~tkevWP~~d~lpL~~sie~ePl~~~~~rkv~n~~kp~~kd~~a~dLle~ll~~DP~kR~~ad  310 (376)
T KOG0669|consen  231 GNTEQQQLHLISQLCGSITKEVWPNVDNLPLYQSIELEPLPKGQKRKVKNRLKPYVKDDEALDLLEKLLKLDPTKRIDAD  310 (376)
T ss_pred             CChHHHHHHHHHHHhccCCcccCCCcccchHHHhccCCCCCcchhhhhhhhcccccCChhHHHHHHHHhccCcccCcchH
Confidence            4433200        000   0000           00011            111125788999999999999999999


Q ss_pred             HHHHHHHHHHHhhChHHHHHHHHHHHHhhhhhc
Q 018699          317 QNLQKSFQDYLCSNPQLLKNLKELLAKQRASLC  349 (351)
Q Consensus       317 e~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  349 (351)
                      +++.|   +|++.+|-=..+++.++.++-.|+|
T Consensus       311 ~alnh---~~F~kdp~pqanl~~ml~t~~~s~f  340 (376)
T KOG0669|consen  311 QALNH---DFFWKDPMPQANLQDMLSTHLQSMF  340 (376)
T ss_pred             hhhch---hhhhcCCcchhhHHHHHHHhHHHHH
Confidence            99999   5788888777888888888777766

>KOG0584 consensus Serine/threonine protein kinase [General function prediction only]

Probab=100.00  E-value=1.2e-35  Score=272.03  Aligned_cols=250  Identities=18%  Similarity=0.139  Sum_probs=193.8

Q ss_pred             eeEEEEEEeeccCceEEEEEEecCCCCceEEEEecCCC----CChHHHHHHHHHhhhccccccccccceeeecc--cCee
Q 018699           48 KKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPA----FPWEFYMYRQLDQRISGRERSSFGFAHRIHLY--SDYS  121 (351)
Q Consensus        48 ~~Y~i~~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~----~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~  121 (351)
                      +-.++..+||+|+|-+||+|. |..+|..||.-.++-.    ...+.+.+....+.+..+.|++++.+...+..  ...+
T Consensus        40 Ry~k~~evLGrGafKtVYka~-De~~giEVAWnqvk~~d~~q~~~~leR~~~Ev~lLKsL~H~NIirfy~SW~d~~n~~i  118 (632)
T KOG0584|consen   40 RYLKFDEVLGRGAFKTVYKAF-DEEEGIEVAWNQVKIRDVTQSPEELERLYSEVHLLKSLKHPNIIRFYDSWVDTDNKTI  118 (632)
T ss_pred             ceeehhhhcccccceeeeecc-ccccchhhHHHHHhHHHhhcChHHHHHHHHHHHHHccCCCCceeeeeeheecCCCcee
Confidence            344567899999999999999 6888888876544321    12233455555566777889999888776654  3457


Q ss_pred             EEEEEecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHC--CceecCCCCCcEEEeecCCcceeeccCCCC
Q 018699          122 ILVCDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDV--GIIHGDFKPDNLLIRYARDELTVLDHDRSG  199 (351)
Q Consensus       122 ~lv~e~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~--~i~H~dl~p~Nill~~~~~~~~~~~~~~~~  199 (351)
                      -+|+|++..|+|..++.++    +.++...+..|++||+.||.|||++  .|+|||||.+|||++.              
T Consensus       119 n~iTEL~TSGtLr~Y~kk~----~~vn~kaik~W~RQILkGL~yLHs~~PPIIHRDLKCDNIFinG--------------  180 (632)
T KOG0584|consen  119 NFITELFTSGTLREYRKKH----RRVNIKAIKSWCRQILKGLVYLHSQDPPIIHRDLKCDNIFVNG--------------  180 (632)
T ss_pred             eeeeecccCCcHHHHHHHh----ccCCHHHHHHHHHHHHHHhhhhhcCCCCccccccccceEEEcC--------------
Confidence            8999999999999999996    6788889999999999999999998  6999999999999995              


Q ss_pred             CcccCCeEEeecCCccccccCCCCccccccccCCCcccceeccCCCCCccchHhHHHHHHHHHHhCccccccccCCCCCc
Q 018699          200 PWQDQGLCLVDWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQEKKPWKFQVDTYGLCAIVHMMLHNSYMEIEKKASPDGG  279 (351)
Q Consensus       200 ~~~~~~~~l~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~p~~~~~~~~~~~  279 (351)
                        ..|.|||+|+|+|....    .......+|||.|||||++. ..|+..+||||||+++.||.|+.+||..=.... ..
T Consensus       181 --~~G~VKIGDLGLAtl~r----~s~aksvIGTPEFMAPEmYE-E~YnE~VDVYaFGMCmLEMvT~eYPYsEC~n~A-QI  252 (632)
T KOG0584|consen  181 --NLGEVKIGDLGLATLLR----KSHAKSVIGTPEFMAPEMYE-ENYNELVDVYAFGMCMLEMVTSEYPYSECTNPA-QI  252 (632)
T ss_pred             --CcCceeecchhHHHHhh----ccccceeccCccccChHHHh-hhcchhhhhhhhhHHHHHHHhccCChhhhCCHH-HH
Confidence              45779999999997643    22233468999999999988 779999999999999999999999997533221 11


Q ss_pred             eeeecCcchhhh---hHHHHHHHHHHHHhcCCCCCChHHHHHHHHHHHH
Q 018699          280 LVYLPKLSFKRY---WKVELWKSLFTNLLNMSSGNDKEVLQNLQKSFQD  325 (351)
Q Consensus       280 ~~~~~~~~~~~~---~~~~~~~~li~~~L~~dP~~R~s~~e~l~~~~~~  325 (351)
                      |..-...--|..   ...+++++||.+||.. ..+|+|+.|+|.|+|.+
T Consensus       253 YKKV~SGiKP~sl~kV~dPevr~fIekCl~~-~~~R~sa~eLL~d~Ff~  300 (632)
T KOG0584|consen  253 YKKVTSGIKPAALSKVKDPEVREFIEKCLAT-KSERLSAKELLKDPFFD  300 (632)
T ss_pred             HHHHHcCCCHHHhhccCCHHHHHHHHHHhcC-chhccCHHHHhhChhhc
Confidence            111011111111   1128899999999999 99999999999998744

>cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3

Probab=100.00  E-value=1e-34  Score=257.04  Aligned_cols=253  Identities=12%  Similarity=0.099  Sum_probs=181.1

Q ss_pred             EEEEEEeeccCceEEEEEEec--CCCCceEEEEecCCCCChHH---HHHHHHHhhhccccccccccceeeeccc------
Q 018699           50 YQIKGCAGQGGFAKVFKAYVN--GDPEDVVALKIQKPAFPWEF---YMYRQLDQRISGRERSSFGFAHRIHLYS------  118 (351)
Q Consensus        50 Y~i~~~lg~G~~g~V~~a~~~--~~~~~~vaiK~~~~~~~~e~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~------  118 (351)
                      |.+.+.||+|+||+||+|.+.  ..+++.||||++........   ....++ ..+....|+++.....+....      
T Consensus         1 ~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~-~~l~~l~h~~i~~~~~~~~~~~~~~~~   79 (273)
T cd05074           1 FTLGRMLGKGEFGSVREAQLKSEDGSFQKVAVKMLKADIFSSSDIEEFLREA-ACMKEFDHPNVIKLIGVSLRSRAKGRL   79 (273)
T ss_pred             CcchhcccCCCCCCEEeeEeeccCCCceEEEEEEeccccCChHHHHHHHHHH-HHHhcCCCCCcceEEEEEccCCCCCcc
Confidence            678899999999999999863  23578999999876543222   122222 334455677777777655332      


Q ss_pred             CeeEEEEEecCCCCHHHHHHHHHh--hCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeeccC
Q 018699          119 DYSILVCDYLSQGTLQDAINSYVV--IGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHD  196 (351)
Q Consensus       119 ~~~~lv~e~~~~~sL~~~l~~~~~--~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~  196 (351)
                      ...+++++|+.+++|..++.....  ....++...++.++.|++.|++|||+.||+|+||+|+||+++            
T Consensus        80 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~i~H~dikp~nili~------------  147 (273)
T cd05074          80 PIPMVILPFMKHGDLHTFLLMSRIGEEPFTLPLQTLVRFMIDIASGMEYLSSKNFIHRDLAARNCMLN------------  147 (273)
T ss_pred             cceEEEEecCCCCcHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCEeecccchhhEEEc------------
Confidence            234788999999999988754211  112578899999999999999999999999999999999998            


Q ss_pred             CCCCcccCCeEEeecCCccccccCCCCccccccccCCCcccceeccCCCCCccchHhHHHHHHHHHHh-CccccccccCC
Q 018699          197 RSGPWQDQGLCLVDWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQEKKPWKFQVDTYGLCAIVHMMLH-NSYMEIEKKAS  275 (351)
Q Consensus       197 ~~~~~~~~~~~l~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~-g~~p~~~~~~~  275 (351)
                           .++.++|+|||.+................+++.|++||.+.+..++.++|||||||++|+|++ |..||......
T Consensus       148 -----~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~sDi~slG~il~el~~~g~~p~~~~~~~  222 (273)
T cd05074         148 -----ENMTVCVADFGLSKKIYSGDYYRQGCASKLPVKWLALESLADNVYTTHSDVWAFGVTMWEIMTRGQTPYAGVENS  222 (273)
T ss_pred             -----CCCCEEECcccccccccCCcceecCCCccCchhhcCHhHHhcCccchhhhhHHHHHHHHHHhhCCCCCCCCCCHH
Confidence                 677899999998864321111111122234567999999988888999999999999999999 78887643321


Q ss_pred             CCCcee-eecCcchhhhhHHHHHHHHHHHHhcCCCCCChHHHHHHHH
Q 018699          276 PDGGLV-YLPKLSFKRYWKVELWKSLFTNLLNMSSGNDKEVLQNLQK  321 (351)
Q Consensus       276 ~~~~~~-~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~~  321 (351)
                      ...... .......+.... ..+.+++.+||+.+|++||++.+++.+
T Consensus       223 ~~~~~~~~~~~~~~~~~~~-~~~~~l~~~~l~~~p~~Rps~~~~~~~  268 (273)
T cd05074         223 EIYNYLIKGNRLKQPPDCL-EDVYELMCQCWSPEPKCRPSFQHLRDQ  268 (273)
T ss_pred             HHHHHHHcCCcCCCCCCCC-HHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence            100000 001111122233 789999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac

>KOG0662 consensus Cyclin-dependent kinase CDK5 [Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]

Probab=100.00  E-value=1.1e-35  Score=232.84  Aligned_cols=252  Identities=19%  Similarity=0.251  Sum_probs=191.4

Q ss_pred             eEEEEEEeeccCceEEEEEEecCCCCceEEEEecCCCCChH---HHHHHHHHhhhccccccccccceeeecccCeeEEEE
Q 018699           49 KYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFPWE---FYMYRQLDQRISGRERSSFGFAHRIHLYSDYSILVC  125 (351)
Q Consensus        49 ~Y~i~~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~~~e---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~  125 (351)
                      +|.-.++||.|+||+||+|+ +..+++.||+|.++-+...|   ...++++-- +....|.+++..+++...++.+-+|+
T Consensus         3 ~ydkmekigegtygtvfkar-n~~t~eivalkrvrlddddegvpssalreicl-lkelkhknivrl~dvlhsdkkltlvf   80 (292)
T KOG0662|consen    3 KYDKMEKIGEGTYGTVFKAR-NRETHEIVALKRVRLDDDDEGVPSSALREICL-LKELKHKNIVRLHDVLHSDKKLTLVF   80 (292)
T ss_pred             chHHHHhhcCCcceeeEecc-cCCccceEEEEEEeccCCCCCCcHHHHHHHHH-HHHhhhcceeehhhhhccCceeEEeH
Confidence            46667899999999999999 78899999999977543322   112222111 12334557888888888899999999


Q ss_pred             EecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeeccCCCCCcccCC
Q 018699          126 DYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSGPWQDQG  205 (351)
Q Consensus       126 e~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~~~~~~~~~~  205 (351)
                      ||| ..+|..++.+.   ++.+..+.++.++.|++.|+.++|++++.|||+||.|.+++                 .+|.
T Consensus        81 e~c-dqdlkkyfdsl---ng~~d~~~~rsfmlqllrgl~fchshnvlhrdlkpqnllin-----------------~nge  139 (292)
T KOG0662|consen   81 EFC-DQDLKKYFDSL---NGDLDPEIVRSFMLQLLRGLGFCHSHNVLHRDLKPQNLLIN-----------------RNGE  139 (292)
T ss_pred             HHh-hHHHHHHHHhc---CCcCCHHHHHHHHHHHHhhhhhhhhhhhhhccCCcceEEec-----------------cCCc
Confidence            999 77999999887   78999999999999999999999999999999999999999                 8899


Q ss_pred             eEEeecCCccccccCCCCccccccccCCCcccceeccCC-CCCccchHhHHHHHHHHHHh-CccccccccCCC-------
Q 018699          206 LCLVDWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQEKK-PWKFQVDTYGLCAIVHMMLH-NSYMEIEKKASP-------  276 (351)
Q Consensus       206 ~~l~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~-~~~~~~DiwslG~il~~l~~-g~~p~~~~~~~~-------  276 (351)
                      +|++|||+++...  .+-..++..+-|..|.+|.++.|. -|+...|+||.|||+.|+.. |.+.|.......       
T Consensus       140 lkladfglarafg--ipvrcysaevvtlwyrppdvlfgakly~tsidmwsagcifaelanagrplfpg~dvddqlkrif~  217 (292)
T KOG0662|consen  140 LKLADFGLARAFG--IPVRCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFR  217 (292)
T ss_pred             EEecccchhhhcC--CceEeeeceeeeeeccCcceeeeeehhccchHhhhcchHHHHHhhcCCCCCCCCcHHHHHHHHHH
Confidence            9999999997543  223345566778999999999775 57899999999999999994 454443322210       


Q ss_pred             ------CCce-------eeecCcchh--hhhHH------HHHHHHHHHHhcCCCCCChHHHHHHHHHHHH
Q 018699          277 ------DGGL-------VYLPKLSFK--RYWKV------ELWKSLFTNLLNMSSGNDKEVLQNLQKSFQD  325 (351)
Q Consensus       277 ------~~~~-------~~~~~~~~~--~~~~~------~~~~~li~~~L~~dP~~R~s~~e~l~~~~~~  325 (351)
                            +.++       .+.+-+.+|  ..|+.      ..-++++.++|.-+|..|++++.+++||+..
T Consensus       218 ~lg~p~ed~wps~t~lpdyk~yp~ypattswsqivp~lns~grdllqkll~cnp~qrisaeaalqhpyf~  287 (292)
T KOG0662|consen  218 LLGTPTEDQWPSMTKLPDYKPYPIYPATTSWSQIVPKLNSTGRDLLQKLLKCNPAQRISAEAALQHPYFS  287 (292)
T ss_pred             HhCCCccccCCccccCCCCcccCCccccchHHHHhhhhcchhHHHHHHHhccCcccccCHHHHhcCcccc
Confidence                  0000       011111111  22332      4568999999999999999999999998643

>KOG2052 consensus Activin A type IB receptor, serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=3.3e-34  Score=252.52  Aligned_cols=248  Identities=17%  Similarity=0.247  Sum_probs=190.2

Q ss_pred             CeeEEEEEEeeccCceEEEEEEecCCCCceEEEEecCCCCChHHHHHHHHHhhhccccccccccceeeecc---cCeeEE
Q 018699           47 GKKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFPWEFYMYRQLDQRISGRERSSFGFAHRIHLY---SDYSIL  123 (351)
Q Consensus        47 ~~~Y~i~~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~l  123 (351)
                      .++.++++.||+|.||.||+|+|+   |+.||||++....+.....+.++.+.+...+.+.+.++..-...   -.++++
T Consensus       210 arqI~L~e~IGkGRyGEVwrG~wr---Ge~VAVKiF~srdE~SWfrEtEIYqTvmLRHENILgFIaaD~~~~gs~TQLwL  286 (513)
T KOG2052|consen  210 ARQIVLQEIIGKGRFGEVWRGRWR---GEDVAVKIFSSRDERSWFRETEIYQTVMLRHENILGFIAADNKDNGSWTQLWL  286 (513)
T ss_pred             hheeEEEEEecCccccceeecccc---CCceEEEEecccchhhhhhHHHHHHHHHhccchhhhhhhccccCCCceEEEEE
Confidence            478899999999999999999986   67899999988766666666666665544433333333222111   247899


Q ss_pred             EEEecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHC--------CceecCCCCCcEEEeecCCcceeecc
Q 018699          124 VCDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDV--------GIIHGDFKPDNLLIRYARDELTVLDH  195 (351)
Q Consensus       124 v~e~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~--------~i~H~dl~p~Nill~~~~~~~~~~~~  195 (351)
                      |++|++.|||.|++++     ..++.+....++..+++||++||..        .|+|||||..||++.           
T Consensus       287 vTdYHe~GSL~DyL~r-----~tv~~~~ml~LalS~AsGLaHLH~eI~GTqgKPaIAHRDlKSKNILVK-----------  350 (513)
T KOG2052|consen  287 VTDYHEHGSLYDYLNR-----NTVTTEGMLKLALSIASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVK-----------  350 (513)
T ss_pred             eeecccCCcHHHHHhh-----ccCCHHHHHHHHHHHhhhHHHHHHHHhcCCCCchhhccccccccEEEc-----------
Confidence            9999999999999998     4799999999999999999999975        599999999999999           


Q ss_pred             CCCCCcccCCeEEeecCCccccccCCC--CccccccccCCCcccceeccCC----CC--CccchHhHHHHHHHHHHhC--
Q 018699          196 DRSGPWQDQGLCLVDWGRGIDLHLFPD--NMEFEGDCRTSGFRCIEMQEKK----PW--KFQVDTYGLCAIVHMMLHN--  265 (351)
Q Consensus       196 ~~~~~~~~~~~~l~Dfg~a~~~~~~~~--~~~~~~~~g~~~y~aPE~~~~~----~~--~~~~DiwslG~il~~l~~g--  265 (351)
                            +++.+.|+|+|+|..-....+  +...+..+||..|||||++...    .+  ...+||||+|.++||+.-.  
T Consensus       351 ------kn~~C~IADLGLAv~h~~~t~~idi~~N~rVGTKRYMAPEvLdetin~~~Fesyk~ADIYafgLVlWEiarRc~  424 (513)
T KOG2052|consen  351 ------KNGTCCIADLGLAVRHDSDTDTIDIPPNPRVGTKRYMAPEVLDETINMKHFESYKRADIYAFGLVLWEIARRCE  424 (513)
T ss_pred             ------cCCcEEEeeceeeEEecccCCcccCCCCCccceeeccChHHhhhhcChhhhhhhhHHHHHHHHHHHHHHHHHhh
Confidence                  899999999999965332211  2345677899999999998543    12  2678999999999998833  


Q ss_pred             --------ccccccccCCCC-----Cce--eeecCcchhhhhHH----HHHHHHHHHHhcCCCCCChHHHHHH
Q 018699          266 --------SYMEIEKKASPD-----GGL--VYLPKLSFKRYWKV----ELWKSLFTNLLNMSSGNDKEVLQNL  319 (351)
Q Consensus       266 --------~~p~~~~~~~~~-----~~~--~~~~~~~~~~~~~~----~~~~~li~~~L~~dP~~R~s~~e~l  319 (351)
                              .+||....+.+.     ...  ....++.+|..|.+    ..+.++|+.||..+|.-|.|+..+-
T Consensus       425 ~ggi~eey~~Pyyd~Vp~DPs~eeMrkVVCv~~~RP~ipnrW~s~~~l~~m~klMkeCW~~Np~aRltALriK  497 (513)
T KOG2052|consen  425 SGGIVEEYQLPYYDVVPSDPSFEEMRKVVCVQKLRPNIPNRWKSDPALRVMAKLMKECWYANPAARLTALRIK  497 (513)
T ss_pred             cCCEehhhcCCcccCCCCCCCHHHHhcceeecccCCCCCcccccCHHHHHHHHHHHHhhcCCchhhhHHHHHH
Confidence                    357765444311     111  23566677777876    4567799999999999999998763

>KOG0194 consensus Protein tyrosine kinase [Signal transduction mechanisms]

Probab=100.00  E-value=1.2e-34  Score=265.62  Aligned_cols=260  Identities=14%  Similarity=0.106  Sum_probs=200.3

Q ss_pred             cCCCcceEEEEcCeeEEEEEEeeccCceEEEEEEecCCCC---ceEEEEecCCCC-ChHHHHH--HHHHhhhcccccccc
Q 018699           35 NNSSRNKTIEIGGKKYQIKGCAGQGGFAKVFKAYVNGDPE---DVVALKIQKPAF-PWEFYMY--RQLDQRISGRERSSF  108 (351)
Q Consensus        35 ~~~~~~~~~~i~~~~Y~i~~~lg~G~~g~V~~a~~~~~~~---~~vaiK~~~~~~-~~e~~~~--~~~~~~~~~~~~~~~  108 (351)
                      ........+++..++-.+.++||.|+||.||+|......+   ..||+|....+. .....+.  ....+......|+++
T Consensus       144 ~~PI~r~~Wel~H~~v~l~kkLGeGaFGeV~~G~l~~~~~~~~~~VAvK~~k~~~~~~~~~~~e~m~EArvMr~l~H~NV  223 (474)
T KOG0194|consen  144 KRPIPRQKWELSHSDIELGKKLGEGAFGEVFKGKLKLKNGFKVVPVAVKTTKGSSELTKEQIKEFMKEARVMRQLNHPNV  223 (474)
T ss_pred             cccccccccEEeccCccccceeecccccEEEEEEEEecCCceeeeeEEEeecccccccHHHHHHHHHHHHHHHhCCCCCE
Confidence            3444556688888889999999999999999999854433   238999987532 2222222  222234556789999


Q ss_pred             ccceeeecccCeeEEEEEecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCC
Q 018699          109 GFAHRIHLYSDYSILVCDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARD  188 (351)
Q Consensus       109 ~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~  188 (351)
                      +.+.++......+++|||+|.||+|.+++++.   +..++..+...++.+.+.||+|||+++++||||...|+|++    
T Consensus       224 Vr~yGVa~~~~Pl~ivmEl~~gGsL~~~L~k~---~~~v~~~ek~~~~~~AA~Gl~YLh~k~~IHRDIAARNcL~~----  296 (474)
T KOG0194|consen  224 VRFYGVAVLEEPLMLVMELCNGGSLDDYLKKN---KKSLPTLEKLRFCYDAARGLEYLHSKNCIHRDIAARNCLYS----  296 (474)
T ss_pred             EEEEEEEcCCCccEEEEEecCCCcHHHHHHhC---CCCCCHHHHHHHHHHHHhHHHHHHHCCCcchhHhHHHheec----
Confidence            99999999999999999999999999999985   34699999999999999999999999999999999999999    


Q ss_pred             cceeeccCCCCCcccCCeEEeecCCccccccCCCCccccccccCCCcccceeccCCCCCccchHhHHHHHHHHHHh-Ccc
Q 018699          189 ELTVLDHDRSGPWQDQGLCLVDWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQEKKPWKFQVDTYGLCAIVHMMLH-NSY  267 (351)
Q Consensus       189 ~~~~~~~~~~~~~~~~~~~l~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~-g~~  267 (351)
                                   .++.+||+|||++......  ........-...|+|||.+....|++++||||+||++||+++ |..
T Consensus       297 -------------~~~~vKISDFGLs~~~~~~--~~~~~~~klPirWLAPEtl~~~~~s~kTDV~sfGV~~~Eif~~g~~  361 (474)
T KOG0194|consen  297 -------------KKGVVKISDFGLSRAGSQY--VMKKFLKKLPIRWLAPETLNTGIFSFKTDVWSFGVLLWEIFENGAE  361 (474)
T ss_pred             -------------CCCeEEeCccccccCCcce--eeccccccCcceecChhhhccCccccccchhheeeeEEeeeccCCC
Confidence                         6677899999998643211  000001123467999999999999999999999999999998 777


Q ss_pred             ccccccCCCC------CceeeecCcchhhhhHHHHHHHHHHHHhcCCCCCChHHHHHHHH
Q 018699          268 MEIEKKASPD------GGLVYLPKLSFKRYWKVELWKSLFTNLLNMSSGNDKEVLQNLQK  321 (351)
Q Consensus       268 p~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~~  321 (351)
                      ||........      ..+....+...|     ..+..++.+||..||+.||++.++.+.
T Consensus       362 Py~g~~~~~v~~kI~~~~~r~~~~~~~p-----~~~~~~~~~c~~~~p~~R~tm~~i~~~  416 (474)
T KOG0194|consen  362 PYPGMKNYEVKAKIVKNGYRMPIPSKTP-----KELAKVMKQCWKKDPEDRPTMSTIKKK  416 (474)
T ss_pred             CCCCCCHHHHHHHHHhcCccCCCCCCCH-----HHHHHHHHHhccCChhhccCHHHHHHH
Confidence            8876553311      122222222222     788999999999999999999988763

>KOG1095 consensus Protein tyrosine kinase [Signal transduction mechanisms]

Probab=100.00  E-value=1.9e-34  Score=282.09  Aligned_cols=258  Identities=12%  Similarity=0.102  Sum_probs=201.5

Q ss_pred             EcCeeEEEEEEeeccCceEEEEEEecCCCCc----eEEEEecCCCCC-hHHHHHHHHHhhhccccccccccceeeecccC
Q 018699           45 IGGKKYQIKGCAGQGGFAKVFKAYVNGDPED----VVALKIQKPAFP-WEFYMYRQLDQRISGRERSSFGFAHRIHLYSD  119 (351)
Q Consensus        45 i~~~~Y~i~~~lg~G~~g~V~~a~~~~~~~~----~vaiK~~~~~~~-~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  119 (351)
                      +....-++.+.||+|.||.||.|......+.    .||||.+.+... .+...+......+....|+|++....+.....
T Consensus       689 v~~~~v~l~~~lG~G~FG~VY~g~~~~~~~~~~~~~vaiK~l~~~~~~~~~~~Fl~Ea~~m~~f~HpNiv~liGv~l~~~  768 (1025)
T KOG1095|consen  689 VPRKNVTLLRVLGKGAFGEVYEGTYSDVPGSVSPIQVAVKSLKRLSSEQEVSDFLKEALLMSKFDHPNIVSLIGVCLDSG  768 (1025)
T ss_pred             CChhheEeeeeeccccccceEEEEEecCCCCccceEEEEEeccccCCHHHHHHHHHHHHHHhcCCCcceeeEEEeecCCC
Confidence            5578889999999999999999997555554    489998876532 23333444445566778999999999998899


Q ss_pred             eeEEEEEecCCCCHHHHHHHHH---hhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeeccC
Q 018699          120 YSILVCDYLSQGTLQDAINSYV---VIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHD  196 (351)
Q Consensus       120 ~~~lv~e~~~~~sL~~~l~~~~---~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~  196 (351)
                      ..++++|||+||+|..+++..+   .+...++......++.+|+.|+.||+++++|||||...|.|++            
T Consensus       769 ~~~i~leyM~gGDL~sflr~~r~~~~~~~~L~~~dLl~~a~dvA~G~~YLe~~~fvHRDLAaRNCLL~------------  836 (1025)
T KOG1095|consen  769 PPLILLEYMEGGDLLSFLRESRPAPFQPSNLSMRDLLAFALDVAKGMNYLESKHFVHRDLAARNCLLD------------  836 (1025)
T ss_pred             CcEEEehhcccCcHHHHHHhcccccCCCCCCCHHHHHHHHHHHhhhhHHHHhCCCcCcchhhhheeec------------
Confidence            9999999999999999998752   1134688899999999999999999999999999999999999            


Q ss_pred             CCCCcccCCeEEeecCCccccccCCCCccccccccCCCcccceeccCCCCCccchHhHHHHHHHHHHh-CccccccccCC
Q 018699          197 RSGPWQDQGLCLVDWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQEKKPWKFQVDTYGLCAIVHMMLH-NSYMEIEKKAS  275 (351)
Q Consensus       197 ~~~~~~~~~~~l~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~-g~~p~~~~~~~  275 (351)
                           ....+||+|||+|+.+....-......-.-...|||||.+....++.++||||+||++||+++ |..||...+..
T Consensus       837 -----~~r~VKIaDFGlArDiy~~~yyr~~~~a~lPvkWm~PEsl~d~iFtskSDvWsFGVllWEifslG~~PY~~~~n~  911 (1025)
T KOG1095|consen  837 -----ERRVVKIADFGLARDIYDKDYYRKHGEAMLPVKWMPPESLKDGIFTSKSDVWSFGVLLWEIFSLGATPYPSRSNF  911 (1025)
T ss_pred             -----ccCcEEEcccchhHhhhhchheeccCccccceecCCHHHHhhcccccccchhhhHHHHHHHHhCCCCCCCCcchH
Confidence                 778899999999984332111111111122357999999999999999999999999999996 56677655443


Q ss_pred             CCCc-eeeecCcchhhhhHHHHHHHHHHHHhcCCCCCChHHHHHHH
Q 018699          276 PDGG-LVYLPKLSFKRYWKVELWKSLFTNLLNMSSGNDKEVLQNLQ  320 (351)
Q Consensus       276 ~~~~-~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~  320 (351)
                      .... +....+...|.++. +.+-++|.+||..+|+.||++..++.
T Consensus       912 ~v~~~~~~ggRL~~P~~CP-~~ly~lM~~CW~~~pe~RP~F~~i~~  956 (1025)
T KOG1095|consen  912 EVLLDVLEGGRLDPPSYCP-EKLYQLMLQCWKHDPEDRPSFRTIVE  956 (1025)
T ss_pred             HHHHHHHhCCccCCCCCCC-hHHHHHHHHHccCChhhCccHHHHHh
Confidence            2211 22233555666666 77779999999999999999999987

>KOG1026 consensus Nerve growth factor receptor TRKA and related tyrosine kinases [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]

Probab=100.00  E-value=5.5e-35  Score=276.62  Aligned_cols=272  Identities=15%  Similarity=0.111  Sum_probs=210.6

Q ss_pred             ceEEEEcCeeEEEEEEeeccCceEEEEEEecC----CCCceEEEEecCCCCCh-HHHHHHHHHhhhccccccccccceee
Q 018699           40 NKTIEIGGKKYQIKGCAGQGGFAKVFKAYVNG----DPEDVVALKIQKPAFPW-EFYMYRQLDQRISGRERSSFGFAHRI  114 (351)
Q Consensus        40 ~~~~~i~~~~Y~i~~~lg~G~~g~V~~a~~~~----~~~~~vaiK~~~~~~~~-e~~~~~~~~~~~~~~~~~~~~~~~~~  114 (351)
                      -...++...+-++.+.||.|+||.||+|+-.+    .....||||.++..... ...-++.....+....|++++.+.++
T Consensus       478 ~~~~~i~r~~i~~~~eLGegaFGkVf~a~~~~l~p~~~~~lVAVK~LKd~a~~~~~~dF~REaeLla~l~H~nIVrLlGV  557 (774)
T KOG1026|consen  478 LKVLEIPRSDIVFKEELGEGAFGKVFLAEAYGLLPGQDEQLVAVKALKDKAENQARQDFRREAELLAELQHPNIVRLLGV  557 (774)
T ss_pred             cceeEechhheeehhhhcCchhhhhhhhhccCCCCCccceehhHhhhcccccHHHHHHHHHHHHHHHhccCCCeEEEEEE
Confidence            34667888899999999999999999998522    34578999999877654 22233444445667889999999999


Q ss_pred             ecccCeeEEEEEecCCCCHHHHHHHHHhh------C----CChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEe
Q 018699          115 HLYSDYSILVCDYLSQGTLQDAINSYVVI------G----KSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIR  184 (351)
Q Consensus       115 ~~~~~~~~lv~e~~~~~sL~~~l~~~~~~------~----~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~  184 (351)
                      +..++.+|+|+||+..|+|.+++..+...      +    .+++..+.+.|+.||+.|+.||.++.+|||||...|.++.
T Consensus       558 C~~~~P~~MvFEYm~~GDL~eFLra~sP~a~~~~~g~~~~~~L~~~q~L~iA~QIAaGM~YLs~~~FVHRDLATRNCLVg  637 (774)
T KOG1026|consen  558 CREGDPLCMVFEYMDHGDLHEFLRARSPKADKLASGQDTPPPLSTSQFLHIATQIAAGMEYLSSHHFVHRDLATRNCLVG  637 (774)
T ss_pred             EccCCeeEEEEEecccccHHHHHHhhCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCcccccchhhhhceec
Confidence            99999999999999999999999875210      1    1388899999999999999999999999999999999999


Q ss_pred             ecCCcceeeccCCCCCcccCCeEEeecCCccccccCCCCccccccccCCCcccceeccCCCCCccchHhHHHHHHHHHH-
Q 018699          185 YARDELTVLDHDRSGPWQDQGLCLVDWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQEKKPWKFQVDTYGLCAIVHMML-  263 (351)
Q Consensus       185 ~~~~~~~~~~~~~~~~~~~~~~~l~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~l~-  263 (351)
                                       ++..|||+|||+++.+....--.......-...|||||.+....|+.++||||+||++||++ 
T Consensus       638 -----------------e~l~VKIsDfGLsRdiYssDYYk~~~~t~lPIRWMppEsIly~kFTteSDVWs~GVvLWEIFs  700 (774)
T KOG1026|consen  638 -----------------ENLVVKISDFGLSRDIYSSDYYKVRGNTLLPIRWMPPESILYGKFTTESDVWSFGVVLWEIFS  700 (774)
T ss_pred             -----------------cceEEEecccccchhhhhhhhhcccCCceeeeecCCHHHhhcCcccchhhhhhhhhhhhhhhc
Confidence                             88889999999998643221111111223456899999999999999999999999999999 


Q ss_pred             hCccccccccCCCCCceee-ecCcchhhhhHHHHHHHHHHHHhcCCCCCChHHHHHHHHHHHHHHhhC
Q 018699          264 HNSYMEIEKKASPDGGLVY-LPKLSFKRYWKVELWKSLFTNLLNMSSGNDKEVLQNLQKSFQDYLCSN  330 (351)
Q Consensus       264 ~g~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~~~~~~~~~~~  330 (351)
                      .|..|+......+....+. ..-.+.|+.++ ..+.+||..||+.+|.+||++.|+ .+-+.++..+-
T Consensus       701 yG~QPy~glSn~EVIe~i~~g~lL~~Pe~CP-~~vY~LM~~CW~~~P~~RPsF~eI-~~~L~~~~~~s  766 (774)
T KOG1026|consen  701 YGKQPYYGLSNQEVIECIRAGQLLSCPENCP-TEVYSLMLECWNENPKRRPSFKEI-HSRLQAWAQAS  766 (774)
T ss_pred             cccCcccccchHHHHHHHHcCCcccCCCCCC-HHHHHHHHHHhhcCcccCCCHHHH-HHHHHHHHhcC
Confidence            6788988765542211111 11244455555 889999999999999999999987 33344444433

>KOG1151 consensus Tousled-like protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=1e-34  Score=255.63  Aligned_cols=254  Identities=18%  Similarity=0.159  Sum_probs=195.2

Q ss_pred             cCeeEEEEEEeeccCceEEEEEEecCCCCceEEEEecCCCCChHHH-----HHHHHH--hhhccccccccccceeeec-c
Q 018699           46 GGKKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFPWEFY-----MYRQLD--QRISGRERSSFGFAHRIHL-Y  117 (351)
Q Consensus        46 ~~~~Y~i~~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~~~e~~-----~~~~~~--~~~~~~~~~~~~~~~~~~~-~  117 (351)
                      ..++|.+++.||+|||+.||+|. +...+++||+|+-.-...|..+     ....+.  .....+.|+.++...+++. +
T Consensus       461 Ln~RYLlLhLLGrGGFSEVyKAF-Dl~EqRYvAvKIHqlNK~WrdEKKeNYhKHAcREyrIHKeLDHpRIVKlYDyfslD  539 (775)
T KOG1151|consen  461 LNDRYLLLHLLGRGGFSEVYKAF-DLTEQRYVAVKIHQLNKNWRDEKKENYHKHACREYRIHKELDHPRIVKLYDYFSLD  539 (775)
T ss_pred             hHHHHHHHHHhccccHHHHHHhc-ccchhheeeEeeehhccchhhHhhhhHHHHHHHHHhhhhccCcceeeeeeeeeeec
Confidence            36899999999999999999999 6788899999984432222111     111111  2234556777888777774 4


Q ss_pred             cCeeEEEEEecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHC--CceecCCCCCcEEEeecCCcceeecc
Q 018699          118 SDYSILVCDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDV--GIIHGDFKPDNLLIRYARDELTVLDH  195 (351)
Q Consensus       118 ~~~~~lv~e~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~--~i~H~dl~p~Nill~~~~~~~~~~~~  195 (351)
                      .+.+|-|+|||+|.+|.-++..    .+.+++.+++.|+.||+.||.||.+.  .|+|-||||.||++-..+        
T Consensus       540 tdsFCTVLEYceGNDLDFYLKQ----hklmSEKEARSIiMQiVnAL~YLNEikpPIIHYDLKPgNILLv~Gt--------  607 (775)
T KOG1151|consen  540 TDSFCTVLEYCEGNDLDFYLKQ----HKLMSEKEARSIIMQIVNALKYLNEIKPPIIHYDLKPGNILLVNGT--------  607 (775)
T ss_pred             cccceeeeeecCCCchhHHHHh----hhhhhHHHHHHHHHHHHHHHHHHhccCCCeeeeccCCccEEEecCc--------
Confidence            5678899999999999999988    57899999999999999999999986  799999999999998554        


Q ss_pred             CCCCCcccCCeEEeecCCccccccCCCCc----c-ccccccCCCcccceecc-C---CCCCccchHhHHHHHHHHHHhCc
Q 018699          196 DRSGPWQDQGLCLVDWGRGIDLHLFPDNM----E-FEGDCRTSGFRCIEMQE-K---KPWKFQVDTYGLCAIVHMMLHNS  266 (351)
Q Consensus       196 ~~~~~~~~~~~~l~Dfg~a~~~~~~~~~~----~-~~~~~g~~~y~aPE~~~-~---~~~~~~~DiwslG~il~~l~~g~  266 (351)
                            .-|.+||+|||++..+.....+.    . .....||-+|++||++. +   ...+.++||||+|||+|+++.|+
T Consensus       608 ------acGeIKITDFGLSKIMdddSy~~vdGmeLTSQgAGTYWYLPPEcFvVgkePPKIsnKVDVWSvGVIFyQClYGr  681 (775)
T KOG1151|consen  608 ------ACGEIKITDFGLSKIMDDDSYNSVDGMELTSQGAGTYWYLPPECFVVGKEPPKISNKVDVWSVGVIFYQCLYGR  681 (775)
T ss_pred             ------ccceeEeeecchhhhccCCccCcccceeeecccCceeeecCcceeecCCCCCccccceeeEeeehhhhhhhccC
Confidence                  56789999999998765433321    1 23456899999999983 2   34578999999999999999999


Q ss_pred             cccccccCC----------CCCceeeecCcchhhhhHHHHHHHHHHHHhcCCCCCChHHHHHHHHHH
Q 018699          267 YMEIEKKAS----------PDGGLVYLPKLSFKRYWKVELWKSLFTNLLNMSSGNDKEVLQNLQKSF  323 (351)
Q Consensus       267 ~p~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~~~~  323 (351)
                      -||......          ....+.+++.+...     .++++||++||++.-+.|+.+.++-.||+
T Consensus       682 KPFGhnqsQQdILqeNTIlkAtEVqFP~KPvVs-----seAkaFIRRCLaYRKeDR~DV~qLA~dpy  743 (775)
T KOG1151|consen  682 KPFGHNQSQQDILQENTILKATEVQFPPKPVVS-----SEAKAFIRRCLAYRKEDRIDVQQLACDPY  743 (775)
T ss_pred             CCCCCchhHHHHHhhhchhcceeccCCCCCccC-----HHHHHHHHHHHHhhhhhhhhHHHHccCcc
Confidence            999643211          11222233333333     78899999999999999999999988874

>KOG3653 consensus Transforming growth factor beta/activin receptor subfamily of serine/threonine kinases [Signal transduction mechanisms]

Probab=100.00  E-value=1.3e-33  Score=250.49  Aligned_cols=249  Identities=16%  Similarity=0.154  Sum_probs=190.4

Q ss_pred             EcCeeEEEEEEeeccCceEEEEEEecCCCCceEEEEecCCCCChHHHHHHHHHhhhccccccccccceeeecc----cCe
Q 018699           45 IGGKKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFPWEFYMYRQLDQRISGRERSSFGFAHRIHLY----SDY  120 (351)
Q Consensus        45 i~~~~Y~i~~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~  120 (351)
                      .+....++.+.||+|.||.||+|..+   ++.||||++...........+.+... ....|.++..+.....-    ...
T Consensus       207 ~~l~pl~l~eli~~Grfg~V~KaqL~---~~~VAVKifp~~~kqs~~~Ek~Iy~l-p~m~h~nIl~Fi~~ekr~t~~~~e  282 (534)
T KOG3653|consen  207 LELDPLQLLELIGRGRFGCVWKAQLD---NRLVAVKIFPEQEKQSFQNEKNIYSL-PGMKHENILQFIGAEKRGTADRME  282 (534)
T ss_pred             ccCCchhhHHHhhcCccceeehhhcc---CceeEEEecCHHHHHHHHhHHHHHhc-cCccchhHHHhhchhccCCccccc
Confidence            34577889999999999999999853   58999999986544444444444443 24566676666554433    337


Q ss_pred             eEEEEEecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHC---------CceecCCCCCcEEEeecCCcce
Q 018699          121 SILVCDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDV---------GIIHGDFKPDNLLIRYARDELT  191 (351)
Q Consensus       121 ~~lv~e~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~---------~i~H~dl~p~Nill~~~~~~~~  191 (351)
                      +++|++|.+.|+|.+++..     ..+++....+++..++.||+|||+.         +|+|||||..||++.       
T Consensus       283 ywLVt~fh~kGsL~dyL~~-----ntisw~~~cria~SmarGLa~LHee~p~~d~~Kp~IaHRDlkSkNVLvK-------  350 (534)
T KOG3653|consen  283 YWLVTEFHPKGSLCDYLKA-----NTISWNSLCRIAESMARGLAHLHEELPRGDHHKPPIAHRDLKSKNVLVK-------  350 (534)
T ss_pred             eeEEeeeccCCcHHHHHHh-----ccccHHHHHHHHHHHHHHHHHhcccCCcCCCCCCccccccccccceEEc-------
Confidence            8999999999999999997     4789999999999999999999984         699999999999999       


Q ss_pred             eeccCCCCCcccCCeEEeecCCccccccCCCCccccccccCCCcccceeccCCC-C-----CccchHhHHHHHHHHHHhC
Q 018699          192 VLDHDRSGPWQDQGLCLVDWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQEKKP-W-----KFQVDTYGLCAIVHMMLHN  265 (351)
Q Consensus       192 ~~~~~~~~~~~~~~~~l~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~-~-----~~~~DiwslG~il~~l~~g  265 (351)
                                ++++..|+|||+|.......+.......+||..|||||++.|.. +     -.+.||||+|.++||+++.
T Consensus       351 ----------~DlTccIaDFGLAl~~~p~~~~~d~~~qVGT~RYMAPEvLEgainl~d~~Afkr~DvYamgLVLWEi~SR  420 (534)
T KOG3653|consen  351 ----------NDLTCCIADFGLALRLEPGKPQGDTHGQVGTRRYMAPEVLEGAINLQDRDAFKRIDVYAMGLVLWEIASR  420 (534)
T ss_pred             ----------cCCcEEeeccceeEEecCCCCCcchhhhhhhhhhcCHHHHhhhcccccHHHHHHHHHHHHHHHHHHHHhh
Confidence                      88999999999998766544444455578999999999997643 1     2578999999999999976


Q ss_pred             cc------------ccccccCC---C----CCceeeecCcchhhhhHH----HHHHHHHHHHhcCCCCCChHHHHHH
Q 018699          266 SY------------MEIEKKAS---P----DGGLVYLPKLSFKRYWKV----ELWKSLFTNLLNMSSGNDKEVLQNL  319 (351)
Q Consensus       266 ~~------------p~~~~~~~---~----~~~~~~~~~~~~~~~~~~----~~~~~li~~~L~~dP~~R~s~~e~l  319 (351)
                      -.            ||..+-..   .    ..-.....++.+|..|..    ..+++.+..||+.||+-|.|+.=+.
T Consensus       421 C~~~~~~~vp~Yqlpfe~evG~hPt~e~mq~~VV~kK~RP~~p~~W~~h~~~~~l~et~EeCWDhDaeARLTA~Cv~  497 (534)
T KOG3653|consen  421 CTDADPGPVPEYQLPFEAEVGNHPTLEEMQELVVRKKQRPKIPDAWRKHAGMAVLCETIEECWDHDAEARLTAGCVE  497 (534)
T ss_pred             cccccCCCCCcccCchhHHhcCCCCHHHHHHHHHhhccCCCChhhhhcCccHHHHHHHHHHHcCCchhhhhhhHHHH
Confidence            32            22211111   0    011123566777887754    7799999999999999999985443

>KOG0608 consensus Warts/lats-like serine threonine kinases [Cell cycle control, cell division, chromosome partitioning]

Probab=100.00  E-value=1.4e-33  Score=257.80  Aligned_cols=269  Identities=19%  Similarity=0.213  Sum_probs=198.7

Q ss_pred             cccCCCcceEEEEcCeeEEEEEEeeccCceEEEEEEecCCCCceEEEEecCCCCChH---HHHHHHHHhhhccccccccc
Q 018699           33 SLNNSSRNKTIEIGGKKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFPWE---FYMYRQLDQRISGRERSSFG  109 (351)
Q Consensus        33 ~~~~~~~~~~~~i~~~~Y~i~~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~~~e---~~~~~~~~~~~~~~~~~~~~  109 (351)
                      ++..+.+.++--....-|..++.||-|+||.|.+++ +.++...+|+|.+.+...-.   +..++.....+......-++
T Consensus       614 KESnYiRLkRaKMdKSmFvkik~iGvGAFGeV~Lv~-KvDT~~lYAmKTLrKaDVl~rnQvaHVKAERDILAEADn~WVV  692 (1034)
T KOG0608|consen  614 KESNYIRLKRAKMDKSMFVKIKTIGVGAFGEVCLVR-KVDTRALYAMKTLRKADVLMRNQVAHVKAERDILAEADNEWVV  692 (1034)
T ss_pred             hhhhHHHHHHhhccccceEEEeeecccccceeEEEe-ecchhhHHHHhhhHHHHHHhhhhhhhhhhhhhhHhhcCCcceE
Confidence            344444444444556678899999999999999999 78889999999988653322   11222222222333334455


Q ss_pred             cceeeecccCeeEEEEEecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCc
Q 018699          110 FAHRIHLYSDYSILVCDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDE  189 (351)
Q Consensus       110 ~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~  189 (351)
                      .+..-+.+.+.+|+||||++||++-.++-+.    +-|++..++.++.++.+|+.+.|..|+|||||||+|||||     
T Consensus       693 rLyySFQDkdnLYFVMdYIPGGDmMSLLIrm----gIFeE~LARFYIAEltcAiesVHkmGFIHRDiKPDNILID-----  763 (1034)
T KOG0608|consen  693 RLYYSFQDKDNLYFVMDYIPGGDMMSLLIRM----GIFEEDLARFYIAELTCAIESVHKMGFIHRDIKPDNILID-----  763 (1034)
T ss_pred             EEEEEeccCCceEEEEeccCCccHHHHHHHh----ccCHHHHHHHHHHHHHHHHHHHHhccceecccCccceEEc-----
Confidence            5556667789999999999999999998874    6899999999999999999999999999999999999999     


Q ss_pred             ceeeccCCCCCcccCCeEEeecCCccccccCCCC----------------------------------------cccccc
Q 018699          190 LTVLDHDRSGPWQDQGLCLVDWGRGIDLHLFPDN----------------------------------------MEFEGD  229 (351)
Q Consensus       190 ~~~~~~~~~~~~~~~~~~l~Dfg~a~~~~~~~~~----------------------------------------~~~~~~  229 (351)
                                  .+|.+||+|||++..+.-.++.                                        -.....
T Consensus       764 ------------rdGHIKLTDFGLCTGfRWTHdskYYq~gdH~RqDSmep~~e~~d~~~~lkvL~~ra~~~h~r~~ahsl  831 (1034)
T KOG0608|consen  764 ------------RDGHIKLTDFGLCTGFRWTHDSKYYQEGDHHRQDSMEPSPEWADISKCLKVLERRAMRQHQRILAHSL  831 (1034)
T ss_pred             ------------cCCceeeeeccccccceeccccccccCCCccccccCCCchhhccccccchHHHHHHHhhhhhhhhhhh
Confidence                        7889999999998533210000                                        001234


Q ss_pred             ccCCCcccceeccCCCCCccchHhHHHHHHHHHHhCccccccccCCCCCceee----ecCcchhhhhHHHHHHHHHHHHh
Q 018699          230 CRTSGFRCIEMQEKKPWKFQVDTYGLCAIVHMMLHNSYMEIEKKASPDGGLVY----LPKLSFKRYWKVELWKSLFTNLL  305 (351)
Q Consensus       230 ~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~p~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~li~~~L  305 (351)
                      +||+.|+|||++....|+..+|+||.|||||+|+.|++||...++..+...+.    ....+.....+ .++.++|.++-
T Consensus       832 vgt~nyiapevl~r~g~~q~cdwws~gvil~em~~g~~pf~~~tp~~tq~kv~nw~~~l~~~~~~~ls-~e~~~li~kLc  910 (1034)
T KOG0608|consen  832 VGTPNYIAPEVLARTGYTQLCDWWSVGVILYEMLVGQPPFLADTPGETQYKVINWRNFLHIPYQGNLS-KEALDLIQKLC  910 (1034)
T ss_pred             cCCCcccChHHhcccCccccchhhHhhHHHHHHhhCCCCccCCCCCcceeeeeehhhccccccccccC-HHHHHHHHHHh
Confidence            69999999999999999999999999999999999999999888764422221    12222333344 77888887754


Q ss_pred             cCCCCCChH---HHHHHHHHHHH
Q 018699          306 NMSSGNDKE---VLQNLQKSFQD  325 (351)
Q Consensus       306 ~~dP~~R~s---~~e~l~~~~~~  325 (351)
                       -+++.|..   ++|+-.|+|..
T Consensus       911 -~sad~RLGkng~d~vKaHpfFk  932 (1034)
T KOG0608|consen  911 -CSADSRLGKNGADQVKAHPFFK  932 (1034)
T ss_pred             -cChhhhhcccchhhhhcCcccc
Confidence             46777763   45566687643

>KOG0614 consensus cGMP-dependent protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=4.5e-35  Score=261.53  Aligned_cols=254  Identities=20%  Similarity=0.191  Sum_probs=202.0

Q ss_pred             EcCeeEEEEEEeeccCceEEEEEEecCCCCceEEEEecCCCCChHHHHHHHH---HhhhccccccccccceeeecccCee
Q 018699           45 IGGKKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFPWEFYMYRQL---DQRISGRERSSFGFAHRIHLYSDYS  121 (351)
Q Consensus        45 i~~~~Y~i~~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~~~e~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~  121 (351)
                      +.-.+.+++..||-|+||.|=++.. ......+|+|++++...-+......+   .+.......+.++.+.--+....++
T Consensus       417 v~l~dl~~iaTLGvGgFGRVELV~~-~~~~~~fAlKilkK~hIVdtkQqeHv~sEr~Im~~~~s~fIvrLYrTfrd~kyv  495 (732)
T KOG0614|consen  417 VKLSDLKRIATLGVGGFGRVELVKV-NSQKATFALKILKKKHIVDTKQQEHVFSERNIMMECRSDFIVRLYRTFRDSKYV  495 (732)
T ss_pred             cchhhhhhhhhcccCccceEEEEEe-cccchHHHHHHHhHhhccchhHHHHHHhHHHHHHhcCchHHHHHHHHhccchhh
Confidence            3346788999999999999999984 33333589999876533222222222   2222233455566666666678899


Q ss_pred             EEEEEecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeeccCCCCCc
Q 018699          122 ILVCDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSGPW  201 (351)
Q Consensus       122 ~lv~e~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~~~~~~  201 (351)
                      |++||-|-||.|+..+..+    +.|.+.+++.++..+++|+.|||++||++|||||+|.+++                 
T Consensus       496 YmLmEaClGGElWTiLrdR----g~Fdd~tarF~~acv~EAfeYLH~k~iIYRDLKPENllLd-----------------  554 (732)
T KOG0614|consen  496 YMLMEACLGGELWTILRDR----GSFDDYTARFYVACVLEAFEYLHRKGIIYRDLKPENLLLD-----------------  554 (732)
T ss_pred             hhhHHhhcCchhhhhhhhc----CCcccchhhhhHHHHHHHHHHHHhcCceeccCChhheeec-----------------
Confidence            9999999999999999984    7899999999999999999999999999999999999999                 


Q ss_pred             ccCCeEEeecCCccccccCCCCccccccccCCCcccceeccCCCCCccchHhHHHHHHHHHHhCccccccccCCCCCcee
Q 018699          202 QDQGLCLVDWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQEKKPWKFQVDTYGLCAIVHMMLHNSYMEIEKKASPDGGLV  281 (351)
Q Consensus       202 ~~~~~~l~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~p~~~~~~~~~~~~~  281 (351)
                      .+|-+||.|||+|..+.   .+...-++||||.|.|||++..+..+.++|.||||+++|||++|.+||...++...+..+
T Consensus       555 ~~Gy~KLVDFGFAKki~---~g~KTwTFcGTpEYVAPEIILnKGHD~avDyWaLGIli~ELL~G~pPFs~~dpmktYn~I  631 (732)
T KOG0614|consen  555 NRGYLKLVDFGFAKKIG---SGRKTWTFCGTPEYVAPEIILNKGHDRAVDYWALGILIYELLTGSPPFSGVDPMKTYNLI  631 (732)
T ss_pred             cCCceEEeehhhHHHhc---cCCceeeecCCcccccchhhhccCcchhhHHHHHHHHHHHHHcCCCCCCCCchHHHHHHH
Confidence            78889999999997643   345567789999999999999999999999999999999999999999988877554443


Q ss_pred             ee--cCcchhhhhHHHHHHHHHHHHhcCCCCCChH-----HHHHHHHHHH
Q 018699          282 YL--PKLSFKRYWKVELWKSLFTNLLNMSSGNDKE-----VLQNLQKSFQ  324 (351)
Q Consensus       282 ~~--~~~~~~~~~~~~~~~~li~~~L~~dP~~R~s-----~~e~l~~~~~  324 (351)
                      ..  ....+|+... ....+||+++-..+|.+|..     +.++-.|-|.
T Consensus       632 LkGid~i~~Pr~I~-k~a~~Lik~LCr~~P~ERLG~~~~gI~DIkkH~Wf  680 (732)
T KOG0614|consen  632 LKGIDKIEFPRRIT-KTATDLIKKLCRDNPTERLGYQKGGINDIKKHRWF  680 (732)
T ss_pred             Hhhhhhhhcccccc-hhHHHHHHHHHhcCcHhhhccccCChHHHHhhhhh
Confidence            32  2334555555 77889999999999999986     6788777553

>KOG0668 consensus Casein kinase II, alpha subunit [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning; Transcription]

Probab=100.00  E-value=3.4e-34  Score=232.45  Aligned_cols=264  Identities=18%  Similarity=0.243  Sum_probs=197.1

Q ss_pred             ccCCCcceEEEEcCeeEEEEEEeeccCceEEEEEEecCCCCceEEEEecCCCCChHHHHHHHHHhhhcccccccccccee
Q 018699           34 LNNSSRNKTIEIGGKKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFPWEFYMYRQLDQRISGRERSSFGFAHR  113 (351)
Q Consensus        34 ~~~~~~~~~~~i~~~~Y~i~~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~  113 (351)
                      +=+.+......-..++|++++++|+|.|+.||.|. +..+++.++||++++-........-.+.+  .....+++..+.+
T Consensus        24 YWdYE~~~i~wg~~ddYeivrk~GRGKYSEVFeg~-~~~~~eK~ViKiLKPVkkkKIkREikIL~--nL~gg~NIi~L~D  100 (338)
T KOG0668|consen   24 YWDYESLVIDWGNQDDYEIVRKVGRGKYSEVFEGI-NITNNEKCVIKILKPVKKKKIKREIKILQ--NLRGGPNIIKLLD  100 (338)
T ss_pred             hcchhheeeeccccchHHHHHHHcCccHhhHhccc-ccCCCceEEEeeechHHHHHHHHHHHHHH--hccCCCCeeehhh
Confidence            33344433334466899999999999999999999 67888999999988643322222222222  2234567777666


Q ss_pred             eecc--cCeeEEEEEecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcce
Q 018699          114 IHLY--SDYSILVCDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELT  191 (351)
Q Consensus       114 ~~~~--~~~~~lv~e~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~  191 (351)
                      +...  .....+|+||+.+.+...+..       .++...++.++.+++.||.|+|+.||+|||+||.|++++.      
T Consensus       101 iV~Dp~SktpaLiFE~v~n~Dfk~ly~-------tl~d~dIryY~~elLkALdyCHS~GImHRDVKPhNvmIdh------  167 (338)
T KOG0668|consen  101 IVKDPESKTPSLIFEYVNNTDFKQLYP-------TLTDYDIRYYIYELLKALDYCHSMGIMHRDVKPHNVMIDH------  167 (338)
T ss_pred             hhcCccccCchhHhhhhccccHHHHhh-------hhchhhHHHHHHHHHHHHhHHHhcCcccccCCcceeeech------
Confidence            6543  455679999998888777654       4788899999999999999999999999999999999996      


Q ss_pred             eeccCCCCCcccCCeEEeecCCccccccCCCCccccccccCCCcccceeccC-CCCCccchHhHHHHHHHHHHhCccccc
Q 018699          192 VLDHDRSGPWQDQGLCLVDWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQEK-KPWKFQVDTYGLCAIVHMMLHNSYMEI  270 (351)
Q Consensus       192 ~~~~~~~~~~~~~~~~l~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~~DiwslG~il~~l~~g~~p~~  270 (351)
                                ....++|+|+|+|.   ..+++...+-.+.+..|--||++.. ..|+...|+|||||++..|++.+.||.
T Consensus       168 ----------~~rkLrlIDWGLAE---FYHp~~eYnVRVASRyfKGPELLVdy~~YDYSLD~WS~GcmlA~miFrkepFF  234 (338)
T KOG0668|consen  168 ----------ELRKLRLIDWGLAE---FYHPGKEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFF  234 (338)
T ss_pred             ----------hhceeeeeecchHh---hcCCCceeeeeeehhhcCCchheeechhccccHHHHHHHHHHHHHHhccCccc
Confidence                      34558999999994   4567777888888999999999855 668899999999999999999999986


Q ss_pred             cccCCCC------------------Cceeee------------cCcchhhh-------hHHHHHHHHHHHHhcCCCCCCh
Q 018699          271 EKKASPD------------------GGLVYL------------PKLSFKRY-------WKVELWKSLFTNLLNMSSGNDK  313 (351)
Q Consensus       271 ~~~~~~~------------------~~~~~~------------~~~~~~~~-------~~~~~~~~li~~~L~~dP~~R~  313 (351)
                      ......+                  .++...            ...+...+       ..++++.||+.++|.+|..+|+
T Consensus       235 hG~dN~DQLVkIakVLGt~el~~Yl~KY~i~Ldp~~~~i~~~~~rk~w~~Fi~~~n~hl~~peaiDlldklLrYDHqeRl  314 (338)
T KOG0668|consen  235 HGHDNYDQLVKIAKVLGTDELYAYLNKYQIDLDPQFEDILGRHSRKPWSRFINSENQHLVSPEAIDLLDKLLRYDHQERL  314 (338)
T ss_pred             CCCCCHHHHHHHHHHhChHHHHHHHHHHccCCChhHhhHhhccccccHHHhCCccccccCChHHHHHHHHHHhhcccccc
Confidence            4332200                  000000            11111111       1127889999999999999999


Q ss_pred             HHHHHHHHHHHHH
Q 018699          314 EVLQNLQKSFQDY  326 (351)
Q Consensus       314 s~~e~l~~~~~~~  326 (351)
                      |+.|++.||+..-
T Consensus       315 TakEam~HpyF~~  327 (338)
T KOG0668|consen  315 TAKEAMAHPYFAP  327 (338)
T ss_pred             chHHHhcCchHHH
Confidence            9999999986543

>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]

Probab=100.00  E-value=8.7e-34  Score=275.74  Aligned_cols=180  Identities=19%  Similarity=0.237  Sum_probs=132.2

Q ss_pred             eeEEEEEecCCCCHHHHHHHHHhhCCCh-hHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeeccCCC
Q 018699          120 YSILVCDYLSQGTLQDAINSYVVIGKSM-EEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRS  198 (351)
Q Consensus       120 ~~~lv~e~~~~~sL~~~l~~~~~~~~~l-~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~~~  198 (351)
                      .+||=||||+..++.+++..    +... ....+|.++.+|++|++|+|++|||||||||.|||++              
T Consensus       670 ~LYIQMEyCE~~ll~~iI~~----N~~~~~~d~~wrLFreIlEGLaYIH~~giIHRDLKP~NIFLd--------------  731 (1351)
T KOG1035|consen  670 ILYIQMEYCEKTLLRDIIRR----NHFNSQRDEAWRLFREILEGLAYIHDQGIIHRDLKPRNIFLD--------------  731 (1351)
T ss_pred             EEEEEHhhhhhhHHHHHHHh----cccchhhHHHHHHHHHHHHHHHHHHhCceeeccCCcceeEEc--------------
Confidence            45888999988777777776    3333 4778899999999999999999999999999999999              


Q ss_pred             CCcccCCeEEeecCCccccc----------cCC------CCccccccccCCCcccceeccCC---CCCccchHhHHHHHH
Q 018699          199 GPWQDQGLCLVDWGRGIDLH----------LFP------DNMEFEGDCRTSGFRCIEMQEKK---PWKFQVDTYGLCAIV  259 (351)
Q Consensus       199 ~~~~~~~~~l~Dfg~a~~~~----------~~~------~~~~~~~~~g~~~y~aPE~~~~~---~~~~~~DiwslG~il  259 (351)
                         ++..|||+|||+|....          .+.      +.....+.+||..|+|||++.+.   .|+.++|+||||+++
T Consensus       732 ---~~~~VKIGDFGLAt~~~~~~~~~d~~~~~~~~~~g~~~~~~Ts~VGTalYvAPEll~~~~~~~Yn~KiDmYSLGIVl  808 (1351)
T KOG1035|consen  732 ---SRNSVKIGDFGLATDLKENLESIDQDLSFSTNRAGSNDGDLTSQVGTALYVAPELLSDTSSNKYNSKIDMYSLGIVL  808 (1351)
T ss_pred             ---CCCCeeecccccchhhhhhhhhHhhccCccccccCCCCcccccccceeeeecHHHhcccccccccchhhhHHHHHHH
Confidence               77789999999997511          000      11134556899999999999664   599999999999999


Q ss_pred             HHHHhCccccccccCCCC-CceeeecCcchh-hhhHH--HHHHHHHHHHhcCCCCCChHHHHHHHHHH
Q 018699          260 HMMLHNSYMEIEKKASPD-GGLVYLPKLSFK-RYWKV--ELWKSLFTNLLNMSSGNDKEVLQNLQKSF  323 (351)
Q Consensus       260 ~~l~~g~~p~~~~~~~~~-~~~~~~~~~~~~-~~~~~--~~~~~li~~~L~~dP~~R~s~~e~l~~~~  323 (351)
                      |||+.-   |...-+... ......+..+.+ ..+.+  +.-+.+|..||++||++||||.|+|.+-|
T Consensus       809 FEM~yP---F~TsMERa~iL~~LR~g~iP~~~~f~~~~~~~e~slI~~Ll~hdP~kRPtA~eLL~s~l  873 (1351)
T KOG1035|consen  809 FEMLYP---FGTSMERASILTNLRKGSIPEPADFFDPEHPEEASLIRWLLSHDPSKRPTATELLNSEL  873 (1351)
T ss_pred             HHHhcc---CCchHHHHHHHHhcccCCCCCCcccccccchHHHHHHHHHhcCCCccCCCHHHHhhccC
Confidence            999964   432211100 000011111111 11221  45578999999999999999999998644

>KOG0665 consensus Jun-N-terminal kinase (JNK) [Signal transduction mechanisms]

Probab=100.00  E-value=8.4e-34  Score=240.56  Aligned_cols=255  Identities=19%  Similarity=0.245  Sum_probs=188.9

Q ss_pred             EcCeeEEEEEEeeccCceEEEEEEecCCCCceEEEEecCCCCChHH---HHHHHHHhhhccccccccccceeeeccc---
Q 018699           45 IGGKKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFPWEF---YMYRQLDQRISGRERSSFGFAHRIHLYS---  118 (351)
Q Consensus        45 i~~~~Y~i~~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~~~e~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~---  118 (351)
                      ..-.||.-.+.+|.|.. .|..|. +.-.+++||+|....++.+..   ...+++.- .....+.++.....++...   
T Consensus        14 tv~~Ry~nL~p~~~g~~-~v~~a~-D~v~~~~v~ikk~~~pf~n~~~akra~rel~l-~~~v~~~nii~l~n~ftP~~~l   90 (369)
T KOG0665|consen   14 TVPKRYVNLKPIGSGAQ-IVVAAF-DQVLGRPVAIKKLSRPFQNQTHAKRAYRELKL-MKCVNHKNIISLLNVFTPQKTL   90 (369)
T ss_pred             eeeeeeeeecccCCCCc-eEEecc-hhhccCceehhhhcCccccCccchhhhhhhhh-hhhhcccceeeeeeccCccccH
Confidence            33579999999999999 788887 678899999999776544321   11122111 1123344555544444332   


Q ss_pred             ---CeeEEEEEecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeecc
Q 018699          119 ---DYSILVCDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDH  195 (351)
Q Consensus       119 ---~~~~lv~e~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~  195 (351)
                         ...|+|||++ ..+|.+.+..      .+.-+++..++.|+++|+++||+.||+||||||+||++.           
T Consensus        91 ~~~~e~y~v~e~m-~~nl~~vi~~------elDH~tis~i~yq~~~~ik~lhs~~IihRdLkPsnivv~-----------  152 (369)
T KOG0665|consen   91 EEFQEVYLVMELM-DANLCQVILM------ELDHETISYILYQMLCGIKHLHSAGIIHRDLKPSNIVVN-----------  152 (369)
T ss_pred             HHHHhHHHHHHhh-hhHHHHHHHH------hcchHHHHHHHHHHHHHHHHHHhcceeecccCcccceec-----------
Confidence               3568999999 7799988874      367788999999999999999999999999999999999           


Q ss_pred             CCCCCcccCCeEEeecCCccccccCCCCccccccccCCCcccceeccCCCCCccchHhHHHHHHHHHHhCccccccccCC
Q 018699          196 DRSGPWQDQGLCLVDWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQEKKPWKFQVDTYGLCAIVHMMLHNSYMEIEKKAS  275 (351)
Q Consensus       196 ~~~~~~~~~~~~l~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~p~~~~~~~  275 (351)
                            .+..+||+|||.|+...   .....++.+.+..|.|||++.+..+...+||||+||++.||++|+..|.+....
T Consensus       153 ------~~~~lKi~dfg~ar~e~---~~~~mtpyVvtRyyrapevil~~~~ke~vdiwSvGci~gEli~~~Vlf~g~d~i  223 (369)
T KOG0665|consen  153 ------SDCTLKILDFGLARTED---TDFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELILGTVLFPGKDHI  223 (369)
T ss_pred             ------chhheeeccchhhcccC---cccccCchhheeeccCchheeccCCcccchhhhhhhHHHHHhhceEEecCchHH
Confidence                  88899999999997533   223456778899999999999988999999999999999999999776544332


Q ss_pred             CC-----------------------Cce-------------------eeecCcchhhhhHHHHHHHHHHHHhcCCCCCCh
Q 018699          276 PD-----------------------GGL-------------------VYLPKLSFKRYWKVELWKSLFTNLLNMSSGNDK  313 (351)
Q Consensus       276 ~~-----------------------~~~-------------------~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~  313 (351)
                      +.                       ..+                   .+......+. .....+++++.+||..||++|.
T Consensus       224 dQ~~ki~~~lgtpd~~F~~qL~~~~r~yv~~~~~y~~~~f~~~fpD~~f~~~~e~~~-~~~~~ardll~~MLvi~pe~Ri  302 (369)
T KOG0665|consen  224 DQWNKIIEQLGTPDPSFMKQLQPTVRNYVENRPQYQAISFSELFPDSLFPVVLEGSK-LDCSLARDLLSKMLVIDPEKRI  302 (369)
T ss_pred             HHHHHHHHHhcCCCHHHHHHhhHHHHHHhhcChHhhccchhhhCCcccccccccCCc-cchHHHHHHHHHhhccChhhcc
Confidence            10                       000                   0011111110 1126789999999999999999


Q ss_pred             HHHHHHHHHHHHHHhhC
Q 018699          314 EVLQNLQKSFQDYLCSN  330 (351)
Q Consensus       314 s~~e~l~~~~~~~~~~~  330 (351)
                      ++.++|+||+...|.+.
T Consensus       303 sv~daL~HPY~~vw~~~  319 (369)
T KOG0665|consen  303 SVDDALRHPYIKVWYDP  319 (369)
T ss_pred             cHHHHhcCCeeeeeccc
Confidence            99999999987654443

>KOG1006 consensus Mitogen-activated protein kinase (MAPK) kinase MKK4 [Signal transduction mechanisms]

Probab=100.00  E-value=1.8e-34  Score=238.85  Aligned_cols=268  Identities=16%  Similarity=0.155  Sum_probs=201.4

Q ss_pred             EEEEcCeeEEEEEEeeccCceEEEEEEecCCCCceEEEEecCCCCC--hHHHHHHHHHhhhccccccccccceeeecccC
Q 018699           42 TIEIGGKKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFP--WEFYMYRQLDQRISGRERSSFGFAHRIHLYSD  119 (351)
Q Consensus        42 ~~~i~~~~Y~i~~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~~--~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  119 (351)
                      ..++.....+-...||.|+||+|++-. .+.+|+..|||.++....  ...+.+.+..........++++.+.+....++
T Consensus        58 ~~~F~~~~Lqdlg~iG~G~fG~V~KM~-hk~sg~~mAVKrIr~~n~~keq~rll~e~d~~mks~~cp~IVkfyGa~F~EG  136 (361)
T KOG1006|consen   58 LHTFTSDNLQDLGEIGNGAFGTVNKML-HKPSGKLMAVKRIRSNNIEKEQKRLLMEHDTVMKSSNCPNIVKFYGALFSEG  136 (361)
T ss_pred             ccccccchHHHHHHhcCCcchhhhhhh-cCccCcEEEEEEeeeccchHHHHHHHHHHHHHHhhcCCcHHHHHhhhhhcCC
Confidence            345555677778899999999999999 578899999999886544  12333444444444555677777777777788


Q ss_pred             eeEEEEEecCCCCHHHHHHHH-HhhCCChhHHHHHHHHHHHHHHHHHHHHC-CceecCCCCCcEEEeecCCcceeeccCC
Q 018699          120 YSILVCDYLSQGTLQDAINSY-VVIGKSMEEVLCIYYTIEMLCILESLHDV-GIIHGDFKPDNLLIRYARDELTVLDHDR  197 (351)
Q Consensus       120 ~~~lv~e~~~~~sL~~~l~~~-~~~~~~l~~~~~~~i~~qi~~~l~~LH~~-~i~H~dl~p~Nill~~~~~~~~~~~~~~  197 (351)
                      ..|+.||+| ..||..+.... ..++..+++..+-.|....+.||.||-.. .|+|||+||+||+++             
T Consensus       137 dcWiCMELM-d~SlDklYk~vy~vq~~~ipE~Ilg~ItvatV~AL~yLK~~lkiIHRDvKPSNILld-------------  202 (361)
T KOG1006|consen  137 DCWICMELM-DISLDKLYKRVYSVQKSRIPENILGHITVATVDALDYLKEELKIIHRDVKPSNILLD-------------  202 (361)
T ss_pred             ceeeeHHHH-hhhHHHHHHHHHHHHhccCcHhhhhheeeeehhHHHHHHHHhhhhhccCChhheEEe-------------
Confidence            889999999 77887765532 22356789999999999999999999965 899999999999999             


Q ss_pred             CCCcccCCeEEeecCCccccccCCCCccccccccCCCcccceecc--CCCCCccchHhHHHHHHHHHHhCccccccccCC
Q 018699          198 SGPWQDQGLCLVDWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQE--KKPWKFQVDTYGLCAIVHMMLHNSYMEIEKKAS  275 (351)
Q Consensus       198 ~~~~~~~~~~l~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~--~~~~~~~~DiwslG~il~~l~~g~~p~~~~~~~  275 (351)
                          ..|.+||||||++..+.   +.-......|...|||||.+.  ++.|+.++|+||||+++||+.||.+|+..+...
T Consensus       203 ----r~G~vKLCDFGIcGqLv---~SiAkT~daGCrpYmAPERi~p~~~gyDiRSDvWSLGITL~EvAtG~fPyr~w~sv  275 (361)
T KOG1006|consen  203 ----RHGDVKLCDFGICGQLV---DSIAKTVDAGCRPYMAPERIDPSDKGYDIRSDVWSLGITLYEVATGNFPYRKWDSV  275 (361)
T ss_pred             ----cCCCEeeecccchHhHH---HHHHhhhccCCccccChhccCCccCCcchhhhhhhhcceEeeeecCCCCcchHHHH
Confidence                78889999999884322   222334456899999999984  456899999999999999999999999776543


Q ss_pred             CC--Cceee--ecCcchhhh---hHHHHHHHHHHHHhcCCCCCChHHHHHHHHHH-HHHHhhChH
Q 018699          276 PD--GGLVY--LPKLSFKRY---WKVELWKSLFTNLLNMSSGNDKEVLQNLQKSF-QDYLCSNPQ  332 (351)
Q Consensus       276 ~~--~~~~~--~~~~~~~~~---~~~~~~~~li~~~L~~dP~~R~s~~e~l~~~~-~~~~~~~~~  332 (351)
                      .+  .+...  ++....+..   ++ ..+..||..||.+|-+.||...+++.++| ..+....++
T Consensus       276 feql~~Vv~gdpp~l~~~~~~~~~s-~~~~~fintCl~Kd~~~Rpky~~Lk~~~fyr~y~~~~~~  339 (361)
T KOG1006|consen  276 FEQLCQVVIGDPPILLFDKECVHYS-FSMVRFINTCLIKDRSDRPKYDDLKKFPFYRMYAVEGPD  339 (361)
T ss_pred             HHHHHHHHcCCCCeecCcccccccC-HHHHHHHHHHhhcccccCcchhhhhcCchhhhhhhcCCc
Confidence            11  00011  111111111   23 78999999999999999999999999876 556666665

>KOG4257 consensus Focal adhesion tyrosine kinase FAK, contains FERM domain [Signal transduction mechanisms]

Probab=100.00  E-value=7.4e-32  Score=246.21  Aligned_cols=262  Identities=15%  Similarity=0.114  Sum_probs=201.8

Q ss_pred             EEEEcCeeEEEEEEeeccCceEEEEEEecC---CCCceEEEEecCCCCChH-HHHHHHHHhhhccccccccccceeeecc
Q 018699           42 TIEIGGKKYQIKGCAGQGGFAKVFKAYVNG---DPEDVVALKIQKPAFPWE-FYMYRQLDQRISGRERSSFGFAHRIHLY  117 (351)
Q Consensus        42 ~~~i~~~~Y~i~~~lg~G~~g~V~~a~~~~---~~~~~vaiK~~~~~~~~e-~~~~~~~~~~~~~~~~~~~~~~~~~~~~  117 (351)
                      ..++......+.++||.|-||.||.|....   +..-.||||..+.+...+ .+.+.+......+-.|++++...++.. 
T Consensus       383 nyel~Re~Itl~r~iG~GqFGdVy~gvYt~~~kge~iaVAvKtCK~d~t~d~tekflqEa~iMrnfdHphIikLIGv~~-  461 (974)
T KOG4257|consen  383 NYELRRELITLKRLIGEGQFGDVYKGVYTDPEKGERIAVAVKTCKTDCTPDDTEKFLQEASIMRNFDHPHIIKLIGVCV-  461 (974)
T ss_pred             cceeehhhccHHHhhcCCcccceeeeEecccccCcceeeeeehhccCCChhhHHHHHHHHHHHHhCCCcchhheeeeee-
Confidence            344555566667899999999999998732   234578999988754332 222323233345567888888888776 


Q ss_pred             cCeeEEEEEecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeeccCC
Q 018699          118 SDYSILVCDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDR  197 (351)
Q Consensus       118 ~~~~~lv~e~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~~  197 (351)
                      ....|+|||+++-|.|..+++..   ...++-.+...+++||+.|++|||+..+|||||...||++.             
T Consensus       462 e~P~WivmEL~~~GELr~yLq~n---k~sL~l~tL~ly~~Qi~talaYLeSkrfVHRDIAaRNiLVs-------------  525 (974)
T KOG4257|consen  462 EQPMWIVMELAPLGELREYLQQN---KDSLPLRTLTLYCYQICTALAYLESKRFVHRDIAARNILVS-------------  525 (974)
T ss_pred             ccceeEEEecccchhHHHHHHhc---cccchHHHHHHHHHHHHHHHHHHHhhchhhhhhhhhheeec-------------
Confidence            45679999999999999999986   46899999999999999999999999999999999999999             


Q ss_pred             CCCcccCCeEEeecCCccccccCCCCccccccc--cCCCcccceeccCCCCCccchHhHHHHHHHHHH-hCccccccccC
Q 018699          198 SGPWQDQGLCLVDWGRGIDLHLFPDNMEFEGDC--RTSGFRCIEMQEKKPWKFQVDTYGLCAIVHMML-HNSYMEIEKKA  274 (351)
Q Consensus       198 ~~~~~~~~~~l~Dfg~a~~~~~~~~~~~~~~~~--g~~~y~aPE~~~~~~~~~~~DiwslG~il~~l~-~g~~p~~~~~~  274 (351)
                          +...+||+|||+++.+...   ..+....  -...|||||.+.-..++.++|||.|||++||++ .|.-||..-..
T Consensus       526 ----Sp~CVKLaDFGLSR~~ed~---~yYkaS~~kLPIKWmaPESINfRrFTtASDVWMFgVCmWEIl~lGvkPfqgvkN  598 (974)
T KOG4257|consen  526 ----SPQCVKLADFGLSRYLEDD---AYYKASRGKLPIKWMAPESINFRRFTTASDVWMFGVCMWEILSLGVKPFQGVKN  598 (974)
T ss_pred             ----Ccceeeecccchhhhcccc---chhhccccccceeecCccccchhcccchhhHHHHHHHHHHHHHhcCCccccccc
Confidence                6777999999999765422   1122222  244699999998889999999999999999977 78889987554


Q ss_pred             CC-CCceeeecCcchhhhhHHHHHHHHHHHHhcCCCCCChHHHHHHHHHHHHHHhh
Q 018699          275 SP-DGGLVYLPKLSFKRYWKVELWKSLFTNLLNMSSGNDKEVLQNLQKSFQDYLCS  329 (351)
Q Consensus       275 ~~-~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~~~~~~~~~~  329 (351)
                      .+ -+......+.+.|..+. +.+-.|+++||++||.+||.+.++.. .+.+.+..
T Consensus       599 sDVI~~iEnGeRlP~P~nCP-p~LYslmskcWayeP~kRPrftei~~-~lsdv~qe  652 (974)
T KOG4257|consen  599 SDVIGHIENGERLPCPPNCP-PALYSLMSKCWAYEPSKRPRFTEIKA-ILSDVLQE  652 (974)
T ss_pred             cceEEEecCCCCCCCCCCCC-hHHHHHHHHHhccCcccCCcHHHHHH-HHHHHHHH
Confidence            42 34444566777777777 88889999999999999999988754 23444443

>smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain

Probab=100.00  E-value=3.9e-32  Score=235.46  Aligned_cols=238  Identities=23%  Similarity=0.196  Sum_probs=181.4

Q ss_pred             CceEEEEEEecCCCCceEEEEecCCCCChH-HHHHHHHHhhhccccccccccceeeecccCeeEEEEEecCCCCHHHHHH
Q 018699           60 GFAKVFKAYVNGDPEDVVALKIQKPAFPWE-FYMYRQLDQRISGRERSSFGFAHRIHLYSDYSILVCDYLSQGTLQDAIN  138 (351)
Q Consensus        60 ~~g~V~~a~~~~~~~~~vaiK~~~~~~~~e-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~  138 (351)
                      +||.||+|.+ ..+++.+|+|++....... ...+...........++++.............++++|++++++|.+++.
T Consensus         1 ~~g~v~~~~~-~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~l~~e~~~~~~L~~~~~   79 (244)
T smart00220        1 SFGKVYLARD-KKTGKLVAIKVIKKEKIKKKRERILREISILKKLKHPNIVRLYDVFEDEDKLYLVMEYCDGGDLFDLLK   79 (244)
T ss_pred             CceEEEEEEE-CCCCcEEEEEEecccccccHHHHHHHHHHHHHhCCCCcHHHHHhheeeCCEEEEEEeCCCCCCHHHHHH
Confidence            5899999994 5678999999987654432 2222222233344477777777777777788999999998889999988


Q ss_pred             HHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeeccCCCCCcccCCeEEeecCCccccc
Q 018699          139 SYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSGPWQDQGLCLVDWGRGIDLH  218 (351)
Q Consensus       139 ~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~~~~~~~~~~~~l~Dfg~a~~~~  218 (351)
                      ..    ..++...++.++.+++.++.+||+.+++|+||+|+||+++                 .++.++|+|||.+....
T Consensus        80 ~~----~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~~i~~~ni~~~-----------------~~~~~~l~d~~~~~~~~  138 (244)
T smart00220       80 KR----GRLSEDEARFYARQILSALEYLHSNGIIHRDLKPENILLD-----------------EDGHVKLADFGLARQLD  138 (244)
T ss_pred             hc----cCCCHHHHHHHHHHHHHHHHHHHHcCeecCCcCHHHeEEC-----------------CCCcEEEccccceeeec
Confidence            73    4488999999999999999999999999999999999999                 66789999999886533


Q ss_pred             cCCCCccccccccCCCcccceeccCCCCCccchHhHHHHHHHHHHhCccccccccC-CCCCceeeecCcchhhh---hHH
Q 018699          219 LFPDNMEFEGDCRTSGFRCIEMQEKKPWKFQVDTYGLCAIVHMMLHNSYMEIEKKA-SPDGGLVYLPKLSFKRY---WKV  294 (351)
Q Consensus       219 ~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~p~~~~~~-~~~~~~~~~~~~~~~~~---~~~  294 (351)
                      ..   .......++..|++||...+..++.++||||+|++++++++|..||..... .................   .. 
T Consensus       139 ~~---~~~~~~~~~~~~~~pE~~~~~~~~~~~Di~slG~~l~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-  214 (244)
T smart00220      139 PG---GLLTTFVGTPEYMAPEVLLGKGYGKAVDVWSLGVILYELLTGKPPFPGDDQLLELFKKIGKPKPPFPPPEWKIS-  214 (244)
T ss_pred             cc---cccccccCCcCCCCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHhccCCCCccccccCC-
Confidence            21   123445678899999999888888999999999999999999999865211 10000000111111111   22 


Q ss_pred             HHHHHHHHHHhcCCCCCChHHHHHHHHHH
Q 018699          295 ELWKSLFTNLLNMSSGNDKEVLQNLQKSF  323 (351)
Q Consensus       295 ~~~~~li~~~L~~dP~~R~s~~e~l~~~~  323 (351)
                      ..+.+++.+||..+|++||++.+++.|+|
T Consensus       215 ~~~~~~i~~~l~~~p~~Rp~~~~~~~~~~  243 (244)
T smart00220      215 PEAKDLIRKLLVKDPEKRLTAEEALQHPF  243 (244)
T ss_pred             HHHHHHHHHHccCCchhccCHHHHhhCCC
Confidence            67899999999999999999999999875

Phosphotransferases. Serine or threonine-specific kinase subfamily.

>KOG1027 consensus Serine/threonine protein kinase and endoribonuclease ERN1/IRE1, sensor of the unfolded protein response pathway [Signal transduction mechanisms]

Probab=99.98  E-value=1.7e-33  Score=264.75  Aligned_cols=252  Identities=19%  Similarity=0.161  Sum_probs=188.4

Q ss_pred             EEEEEEeeccCceE-EEEEEecCCCCceEEEEecCCCCChHHHHHHHHHhhhccccccccccceeeecccCeeEEEEEec
Q 018699           50 YQIKGCAGQGGFAK-VFKAYVNGDPEDVVALKIQKPAFPWEFYMYRQLDQRISGRERSSFGFAHRIHLYSDYSILVCDYL  128 (351)
Q Consensus        50 Y~i~~~lg~G~~g~-V~~a~~~~~~~~~vaiK~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~  128 (351)
                      |.-.+.+|.|+.|+ ||+|..   .|+.||||.+-.+...  ...+++........|++++........+.+.|+..|.|
T Consensus       511 ~~~~eilG~Gs~Gt~Vf~G~y---e~R~VAVKrll~e~~~--~A~rEi~lL~eSD~H~NviRyyc~E~d~qF~YIalELC  585 (903)
T KOG1027|consen  511 FSPKEILGYGSNGTVVFRGVY---EGREVAVKRLLEEFFD--FAQREIQLLQESDEHPNVIRYYCSEQDRQFLYIALELC  585 (903)
T ss_pred             eccHHHcccCCCCcEEEEEee---CCceehHHHHhhHhHH--HHHHHHHHHHhccCCCceEEEEeeccCCceEEEEehHh
Confidence            44456778999885 799984   4789999998765432  23344444445667888888888888899999999999


Q ss_pred             CCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeeccCCCCCcccCCeEE
Q 018699          129 SQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSGPWQDQGLCL  208 (351)
Q Consensus       129 ~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~~~~~~~~~~~~l  208 (351)
                       ..+|.+++...............+.+..|++.|+++||+-+|+||||||.||+|...+..            ....++|
T Consensus       586 -~~sL~dlie~~~~d~~~~~~i~~~~~l~q~~~GlaHLHsl~iVHRDLkPQNILI~~~~~~------------~~~ra~i  652 (903)
T KOG1027|consen  586 -ACSLQDLIESSGLDVEMQSDIDPISVLSQIASGLAHLHSLKIVHRDLKPQNILISVPSAD------------GTLRAKI  652 (903)
T ss_pred             -hhhHHHHHhccccchhhcccccHHHHHHHHHHHHHHHHhcccccccCCCceEEEEccCCC------------cceeEEe
Confidence             779999998731001111214457788999999999999999999999999999965433            3466899


Q ss_pred             eecCCccccccCCC-CccccccccCCCcccceeccCCCCCccchHhHHHHHHHHHHhC-ccccccccCC----CCCceee
Q 018699          209 VDWGRGIDLHLFPD-NMEFEGDCRTSGFRCIEMQEKKPWKFQVDTYGLCAIVHMMLHN-SYMEIEKKAS----PDGGLVY  282 (351)
Q Consensus       209 ~Dfg~a~~~~~~~~-~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g-~~p~~~~~~~----~~~~~~~  282 (351)
                      +|||++........ -....+..||-+|+|||++....-+.++|||||||++||.++| .+||......    ..+.+..
T Consensus       653 SDfglsKkl~~~~sS~~r~s~~sGt~GW~APE~L~~~~~~~avDiFslGCvfyYvltgG~HpFGd~~~R~~NIl~~~~~L  732 (903)
T KOG1027|consen  653 SDFGLSKKLAGGKSSFSRLSGGSGTSGWQAPEQLREDRKTQAVDIFSLGCVFYYVLTGGSHPFGDSLERQANILTGNYTL  732 (903)
T ss_pred             cccccccccCCCcchhhcccCCCCcccccCHHHHhccccCcccchhhcCceEEEEecCCccCCCchHHhhhhhhcCccce
Confidence            99999987543322 1224556799999999999887778899999999999999987 8899765433    1233322


Q ss_pred             ecCcchhhhhHHHHHHHHHHHHhcCCCCCChHHHHHHHHHH
Q 018699          283 LPKLSFKRYWKVELWKSLFTNLLNMSSGNDKEVLQNLQKSF  323 (351)
Q Consensus       283 ~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~~~~  323 (351)
                      ..-.+.+.    .++++||.+||++||..||++.++|.|||
T Consensus       733 ~~L~~~~d----~eA~dLI~~ml~~dP~~RPsa~~VL~HPl  769 (903)
T KOG1027|consen  733 VHLEPLPD----CEAKDLISRMLNPDPQLRPSATDVLNHPL  769 (903)
T ss_pred             eeeccCch----HHHHHHHHHhcCCCcccCCCHHHHhCCCc
Confidence            22222222    27899999999999999999999999995

>KOG0199 consensus ACK and related non-receptor tyrosine kinases [Signal transduction mechanisms]

Probab=99.98  E-value=2.3e-32  Score=252.30  Aligned_cols=267  Identities=13%  Similarity=0.084  Sum_probs=203.4

Q ss_pred             cCCCcceEEEEcCeeEEEEEEeeccCceEEEEEEecCCCCc--eEEEEecCCCCCh-H-HHHHHHHHhhhcccccccccc
Q 018699           35 NNSSRNKTIEIGGKKYQIKGCAGQGGFAKVFKAYVNGDPED--VVALKIQKPAFPW-E-FYMYRQLDQRISGRERSSFGF  110 (351)
Q Consensus        35 ~~~~~~~~~~i~~~~Y~i~~~lg~G~~g~V~~a~~~~~~~~--~vaiK~~~~~~~~-e-~~~~~~~~~~~~~~~~~~~~~  110 (351)
                      .....+....|..+...+.++||+|.||+||+|.|+...|+  .||||.+..+... + ...+++..+ ...+.|++++.
T Consensus        97 ~~p~~~lkclIpee~i~l~e~LG~GsFgvV~rg~Wt~psgk~V~VAVKclr~d~l~~~mddflrEas~-M~~L~H~hliR  175 (1039)
T KOG0199|consen   97 ANPSIDLKCLIPEEQIKLYELLGEGSFGVVKRGTWTQPSGKHVNVAVKCLRDDSLNAIMDDFLREASH-MLKLQHPHLIR  175 (1039)
T ss_pred             CCcCCCcceeccHHHHHHHHHhcCcceeeEeeccccCCCCcEEeEEEEeccCCccchhHHHHHHHHHH-HHhccCcceeE
Confidence            33344566778888999999999999999999999776665  6799998876554 2 223333333 34556777888


Q ss_pred             ceeeecccCeeEEEEEecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcc
Q 018699          111 AHRIHLYSDYSILVCDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDEL  190 (351)
Q Consensus       111 ~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~  190 (351)
                      ++.+... ....+|+|+++.|+|.+.+.+..  ...|.......++.||+.|+.||.++++|||||...|+++.      
T Consensus       176 LyGvVl~-qp~mMV~ELaplGSLldrLrka~--~~~llv~~Lcdya~QiA~aM~YLeskrlvHRDLAARNllla------  246 (1039)
T KOG0199|consen  176 LYGVVLD-QPAMMVFELAPLGSLLDRLRKAK--KAILLVSRLCDYAMQIAKAMQYLESKRLVHRDLAARNLLLA------  246 (1039)
T ss_pred             Eeeeecc-chhhHHhhhcccchHHHHHhhcc--ccceeHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhhhheec------
Confidence            8877765 66789999999999999998732  46788889999999999999999999999999999999999      


Q ss_pred             eeeccCCCCCcccCCeEEeecCCccccccCCCCccccccc-cCCCcccceeccCCCCCccchHhHHHHHHHHHHhC-ccc
Q 018699          191 TVLDHDRSGPWQDQGLCLVDWGRGIDLHLFPDNMEFEGDC-RTSGFRCIEMQEKKPWKFQVDTYGLCAIVHMMLHN-SYM  268 (351)
Q Consensus       191 ~~~~~~~~~~~~~~~~~l~Dfg~a~~~~~~~~~~~~~~~~-g~~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g-~~p  268 (351)
                                 +...+||+|||+.+.+....+...+.... -...|.|||.+....++.++|+|++||++|||+++ ..|
T Consensus       247 -----------sprtVKI~DFGLmRaLg~ned~Yvm~p~rkvPfAWCaPEsLrh~kFShaSDvWmyGVTiWEMFtyGEeP  315 (1039)
T KOG0199|consen  247 -----------SPRTVKICDFGLMRALGENEDMYVMAPQRKVPFAWCAPESLRHRKFSHASDVWMYGVTIWEMFTYGEEP  315 (1039)
T ss_pred             -----------ccceeeeecccceeccCCCCcceEecCCCcCcccccCHhHhccccccccchhhhhhhhHHhhhccCCCC
Confidence                       66679999999987654332222222221 23469999999999999999999999999999965 667


Q ss_pred             cccccCCC-CCceeeecCcchhhhhHHHHHHHHHHHHhcCCCCCChHHHHHHHHHH
Q 018699          269 EIEKKASP-DGGLVYLPKLSFKRYWKVELWKSLFTNLLNMSSGNDKEVLQNLQKSF  323 (351)
Q Consensus       269 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~~~~  323 (351)
                      |..-.... ..........+-|..++ +.+-+++.+||..+|++||++..+..+.+
T Consensus       316 W~G~~g~qIL~~iD~~erLpRPk~cs-edIY~imk~cWah~paDRptFsair~~~~  370 (1039)
T KOG0199|consen  316 WVGCRGIQILKNIDAGERLPRPKYCS-EDIYQIMKNCWAHNPADRPTFSAIREDLV  370 (1039)
T ss_pred             CCCCCHHHHHHhccccccCCCCCCCh-HHHHHHHHHhccCCccccccHHHHHHhHH
Confidence            76543220 01111234445556666 89999999999999999999988865543

>PLN03224 probable serine/threonine protein kinase; Provisional

Probab=99.97  E-value=5.2e-31  Score=248.01  Aligned_cols=259  Identities=20%  Similarity=0.192  Sum_probs=166.5

Q ss_pred             EcCeeEEEEEEeeccCceEEEEEEe---------------cCCCCceEEEEecCCCCCh---------------------
Q 018699           45 IGGKKYQIKGCAGQGGFAKVFKAYV---------------NGDPEDVVALKIQKPAFPW---------------------   88 (351)
Q Consensus        45 i~~~~Y~i~~~lg~G~~g~V~~a~~---------------~~~~~~~vaiK~~~~~~~~---------------------   88 (351)
                      ...++|++.++||+|+||+||+|.+               ....++.||||.+......                     
T Consensus       142 ~~~d~F~i~~~LG~GgFG~VYkG~~~~~~~~~v~~~~~~~~~~~~r~VAVK~l~~~~~~~~~~fl~e~~~~~~~~e~~~v  221 (507)
T PLN03224        142 WSSDDFQLRDKLGGGNFGITFEGLRLQADDQGVTQRSKLTAEQKKRRVVLKRVNMDRQGVRQDFLKTGTLAKGSAETGMV  221 (507)
T ss_pred             ccccCceEeeEeecCCCeEEEEEEecccccchhhhhccccccccCceEEEEEecccchhhHHHHHhhhhhhhcccchhHH
Confidence            3567999999999999999999973               1234568999997643211                     


Q ss_pred             HHHHHHHHHhhhccccccccccceeee--------cccCeeEEEEEecCCCCHHHHHHHHHh-----------hC-----
Q 018699           89 EFYMYRQLDQRISGRERSSFGFAHRIH--------LYSDYSILVCDYLSQGTLQDAINSYVV-----------IG-----  144 (351)
Q Consensus        89 e~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~lv~e~~~~~sL~~~l~~~~~-----------~~-----  144 (351)
                      |......+.+.  ...+..+.....++        ...+..++|+||+++++|.+++.....           .+     
T Consensus       222 E~~~l~~l~~~--~l~~~~~~~~lg~~~~~~~~g~~~~~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~L~e~l~~g~~l~~  299 (507)
T PLN03224        222 EAYMCAKIKRN--PIAAASCAEYLGYFTSNTADGAFTKGSQWLVWKFESDATLGDALDGKLGPFPGCLEEFMMAGKKIPD  299 (507)
T ss_pred             HHHHHHHhhcc--cchhhhhhhhhhhcccccccccccCCceEEEEEcCCCCcHHHHHhhccCCCcchHHHHHhcCCchhh
Confidence            00111111110  00011111111111        123567999999999999998864210           00     


Q ss_pred             ----CChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeeccCCCCCcccCCeEEeecCCccccccC
Q 018699          145 ----KSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSGPWQDQGLCLVDWGRGIDLHLF  220 (351)
Q Consensus       145 ----~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~~~~~~~~~~~~l~Dfg~a~~~~~~  220 (351)
                          ..+++..++.++.|++.++.|||+.+|+|+||||+||+++                 .++.++|+|||++......
T Consensus       300 ~~~~~~~~~~~~~~i~~ql~~aL~~lH~~~ivHrDLKp~NILl~-----------------~~~~~kL~DFGla~~~~~~  362 (507)
T PLN03224        300 NMPQDKRDINVIKGVMRQVLTGLRKLHRIGIVHRDIKPENLLVT-----------------VDGQVKIIDFGAAVDMCTG  362 (507)
T ss_pred             hcccccCCHHHHHHHHHHHHHHHHHHHHCCeecCCCchHhEEEC-----------------CCCcEEEEeCcCccccccC
Confidence                1234567889999999999999999999999999999999                 6677999999998643211


Q ss_pred             CCCccccccccCCCcccceeccCCC--------------------CC--ccchHhHHHHHHHHHHhCcc-ccccccC---
Q 018699          221 PDNMEFEGDCRTSGFRCIEMQEKKP--------------------WK--FQVDTYGLCAIVHMMLHNSY-MEIEKKA---  274 (351)
Q Consensus       221 ~~~~~~~~~~g~~~y~aPE~~~~~~--------------------~~--~~~DiwslG~il~~l~~g~~-p~~~~~~---  274 (351)
                      . ........+++.|+|||.+....                    +.  ...||||+||++|+|++|.. |+.....   
T Consensus       363 ~-~~~~~~g~~tp~Y~aPE~l~~~~~~~~~~~~~~~~~l~~~~~~yg~~~~~DvwSlGvil~em~~~~l~p~~~~~~f~~  441 (507)
T PLN03224        363 I-NFNPLYGMLDPRYSPPEELVMPQSCPRAPAPAMAALLSPFAWLYGRPDLFDSYTAGVLLMQMCVPELRPVANIRLFNT  441 (507)
T ss_pred             C-ccCccccCCCcceeChhhhcCCCCCCccchhhhhhhhhhhHHhcCCCCccchhhHHHHHHHHHhCCCCCccchhhhhh
Confidence            1 11111223478999999875322                    11  24799999999999999975 5532110   


Q ss_pred             -CCC-----Cce--eeecCcchh--hhhHHHHHHHHHHHHhcCCC---CCChHHHHHHHHHHH
Q 018699          275 -SPD-----GGL--VYLPKLSFK--RYWKVELWKSLFTNLLNMSS---GNDKEVLQNLQKSFQ  324 (351)
Q Consensus       275 -~~~-----~~~--~~~~~~~~~--~~~~~~~~~~li~~~L~~dP---~~R~s~~e~l~~~~~  324 (351)
                       ...     ..+  .......++  ...+ +...+|+.+||..+|   .+|+|+.|+|.|||.
T Consensus       442 ~~~~~~~~~~~~r~~~~~~~~~~~~d~~s-~~~~dLi~~LL~~~~~~~~~RlSa~eaL~Hp~f  503 (507)
T PLN03224        442 ELRQYDNDLNRWRMYKGQKYDFSLLDRNK-EAGWDLACKLITKRDQANRGRLSVGQALSHRFF  503 (507)
T ss_pred             HHhhccchHHHHHhhcccCCCcccccccC-hHHHHHHHHHhccCCCCcccCCCHHHHhCCCCc
Confidence             000     000  000111111  1122 788999999999876   689999999999974

>KOG0664 consensus Nemo-like MAPK-related serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.97  E-value=9.5e-34  Score=235.57  Aligned_cols=251  Identities=20%  Similarity=0.213  Sum_probs=179.8

Q ss_pred             eEEEEEEeeccCceEEEEEEecCCCCceEEEEecCCCCCh---HHHHHHHHHhhhccccccccccceeeeccc-----Ce
Q 018699           49 KYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFPW---EFYMYRQLDQRISGRERSSFGFAHRIHLYS-----DY  120 (351)
Q Consensus        49 ~Y~i~~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~~~---e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~  120 (351)
                      +.+--+.||.|+||+||.+. +-.+|+.|++|++..-+.+   ....++++. .+..-.|.+.....++....     ..
T Consensus        54 Di~PDRPIGYGAFGVVWsVT-DPRdgrrvalkK~pnvfq~L~s~krvFre~k-mLcfFkHdNVLSaLDILQPph~dfFqE  131 (449)
T KOG0664|consen   54 DIQPDRPIGYGAFGVVWSVT-DPRSGKRVALKKMPNVFQNLASCKRVFREIK-MLSSFRHDNVLSLLDILQPANPSFFQE  131 (449)
T ss_pred             cCCCCCcccccceeEEEecc-CCCCccchhHhhcchHHHHHHHHHHHHHHHH-HHHhhccccHHHHHHhcCCCCchHHHH
Confidence            45567899999999999999 6788999999997643332   222222222 11222233333333333221     24


Q ss_pred             eEEEEEecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeeccCCCCC
Q 018699          121 SILVCDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSGP  200 (351)
Q Consensus       121 ~~lv~e~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~~~~~  200 (351)
                      +|+|+|++ ..+|...+-+    ...++...+.-+.+||+.|++|||+.+|.||||||.|++++                
T Consensus       132 iYV~TELm-QSDLHKIIVS----PQ~Ls~DHvKVFlYQILRGLKYLHsA~ILHRDIKPGNLLVN----------------  190 (449)
T KOG0664|consen  132 LYVLTELM-QSDLHKIIVS----PQALTPDHVKVFVYQILRGLKYLHTANILHRDIKPGNLLVN----------------  190 (449)
T ss_pred             HHHHHHHH-Hhhhhheecc----CCCCCcchhhhhHHHHHhhhHHHhhcchhhccCCCccEEec----------------
Confidence            57889988 6688888877    67899999999999999999999999999999999999999                


Q ss_pred             cccCCeEEeecCCccccccCCCCccccccccCCCcccceeccC-CCCCccchHhHHHHHHHHHHhCccccccccCCCCCc
Q 018699          201 WQDQGLCLVDWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQEK-KPWKFQVDTYGLCAIVHMMLHNSYMEIEKKASPDGG  279 (351)
Q Consensus       201 ~~~~~~~l~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~~DiwslG~il~~l~~g~~p~~~~~~~~~~~  279 (351)
                       ++..+||||||+++..... +.......+-|.+|+|||++.| ..|+.+.||||.|||+.||+..+..|....+.....
T Consensus       191 -SNCvLKICDFGLARvee~d-~~~hMTqEVVTQYYRAPEiLMGaRhYs~AvDiWSVGCIFaELLgRrILFQAq~PiqQL~  268 (449)
T KOG0664|consen  191 -SNCILKICDFGLARTWDQR-DRLNMTHEVVTQYYRAPELLMGARRYTGAVDIWSVGCIFAELLQRKILFQAAGPIEQLQ  268 (449)
T ss_pred             -cCceEEecccccccccchh-hhhhhHHHHHHHHhccHHHhhcchhhcCccceehhhHHHHHHHhhhhhhhccChHHHHH
Confidence             8999999999999754321 1222334456889999999977 568999999999999999999998887655431100


Q ss_pred             e-----------------------eee---cCcchhhh-------hHHHHHHHHHHHHhcCCCCCChHHHHHHHHHHH
Q 018699          280 L-----------------------VYL---PKLSFKRY-------WKVELWKSLFTNLLNMSSGNDKEVLQNLQKSFQ  324 (351)
Q Consensus       280 ~-----------------------~~~---~~~~~~~~-------~~~~~~~~li~~~L~~dP~~R~s~~e~l~~~~~  324 (351)
                      .                       +..   ..+..+..       ....+..+++..||.+||++|++..+++.|+.+
T Consensus       269 lItdLLGTPs~EaMr~ACEGAk~H~LR~~~k~Ps~~vLYtlsS~~~~~heav~~~~~~l~~d~dkris~~~A~~~~~~  346 (449)
T KOG0664|consen  269 MIIDLLGTPSQEAMKYACEGAKNHVLRAGLRAPDTQRLYKIASPDDKNHEAVDLLQKLLHFDPDKRISVEEALQHRYL  346 (449)
T ss_pred             HHHHHhCCCcHHHHHHHhhhhHHHhhccCCCCCCccceeeecCCcccchHHHHHHHHHhCCCCcccccHhhhcccccc
Confidence            0                       000   00111111       011567789999999999999999999988653

>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional

Probab=99.97  E-value=3.1e-31  Score=273.54  Aligned_cols=236  Identities=12%  Similarity=0.040  Sum_probs=175.8

Q ss_pred             eEEEEEEeeccCceEEEEEEecCCCCceEEEEecCCCCChHHHHHHHHHhhhccccccccccceeeecccCeeEEEEEec
Q 018699           49 KYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFPWEFYMYRQLDQRISGRERSSFGFAHRIHLYSDYSILVCDYL  128 (351)
Q Consensus        49 ~Y~i~~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~  128 (351)
                      .|...+.||+|+||.||+|+ ...+++.||+|.+..........    ........|++++....++..++..|+||||+
T Consensus       691 ~~~~~~~ig~G~~g~Vy~~~-~~~~~~~vavK~~~~~~~~~~~~----~~~l~~l~HpnIv~~~~~~~~~~~~~lv~Ey~  765 (968)
T PLN00113        691 SLKEENVISRGKKGASYKGK-SIKNGMQFVVKEINDVNSIPSSE----IADMGKLQHPNIVKLIGLCRSEKGAYLIHEYI  765 (968)
T ss_pred             hCCcccEEccCCCeeEEEEE-ECCCCcEEEEEEccCCccccHHH----HHHHhhCCCCCcceEEEEEEcCCCCEEEEeCC
Confidence            45667789999999999999 46678999999986543222111    22334557899999999888888899999999


Q ss_pred             CCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHH---HCCceecCCCCCcEEEeecCCcceeeccCCCCCcccCC
Q 018699          129 SQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLH---DVGIIHGDFKPDNLLIRYARDELTVLDHDRSGPWQDQG  205 (351)
Q Consensus       129 ~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH---~~~i~H~dl~p~Nill~~~~~~~~~~~~~~~~~~~~~~  205 (351)
                      ++|+|.+++..       +++..+..++.|++.|++|||   +.+|+||||||+||+++                 .++.
T Consensus       766 ~~g~L~~~l~~-------l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlkp~Nil~~-----------------~~~~  821 (968)
T PLN00113        766 EGKNLSEVLRN-------LSWERRRKIAIGIAKALRFLHCRCSPAVVVGNLSPEKIIID-----------------GKDE  821 (968)
T ss_pred             CCCcHHHHHhc-------CCHHHHHHHHHHHHHHHHHhccCCCCCeecCCCCHHhEEEC-----------------CCCc
Confidence            99999999853       678888999999999999999   66999999999999998                 3444


Q ss_pred             eEEeecCCccccccCCCCccccccccCCCcccceeccCCCCCccchHhHHHHHHHHHHhCccccccccCCCCC-------
Q 018699          206 LCLVDWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQEKKPWKFQVDTYGLCAIVHMMLHNSYMEIEKKASPDG-------  278 (351)
Q Consensus       206 ~~l~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~p~~~~~~~~~~-------  278 (351)
                      .++. +|......      ......+++.|+|||++.+..++.++||||+||++|||++|+.||.........       
T Consensus       822 ~~~~-~~~~~~~~------~~~~~~~t~~y~aPE~~~~~~~~~~sDv~S~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~  894 (968)
T PLN00113        822 PHLR-LSLPGLLC------TDTKCFISSAYVAPETRETKDITEKSDIYGFGLILIELLTGKSPADAEFGVHGSIVEWARY  894 (968)
T ss_pred             eEEE-eccccccc------cCCCccccccccCcccccCCCCCcccchhhHHHHHHHHHhCCCCCCcccCCCCcHHHHHHH
Confidence            4443 44332111      111235788999999999989999999999999999999999998533211000       


Q ss_pred             -----ce--eeec----CcchhhhhHHHHHHHHHHHHhcCCCCCChHHHHHHHH
Q 018699          279 -----GL--VYLP----KLSFKRYWKVELWKSLFTNLLNMSSGNDKEVLQNLQK  321 (351)
Q Consensus       279 -----~~--~~~~----~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~~  321 (351)
                           ..  ...+    ....+.... ..+.+++.+||+.||++||++.|+++.
T Consensus       895 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~l~~~Cl~~~P~~RPt~~evl~~  947 (968)
T PLN00113        895 CYSDCHLDMWIDPSIRGDVSVNQNEI-VEVMNLALHCTATDPTARPCANDVLKT  947 (968)
T ss_pred             hcCccchhheeCccccCCCCccHHHH-HHHHHHHHhhCcCCchhCcCHHHHHHH
Confidence                 00  0001    111111112 467889999999999999999999876

>KOG1094 consensus Discoidin domain receptor DDR1 [Signal transduction mechanisms]

Probab=99.97  E-value=9.7e-32  Score=243.84  Aligned_cols=260  Identities=13%  Similarity=0.094  Sum_probs=197.9

Q ss_pred             EEEEcCeeEEEEEEeeccCceEEEEEEecCCCCceEEEEecCCCCChHH-HHHHHHHhhhccccccccccceeeecccCe
Q 018699           42 TIEIGGKKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFPWEF-YMYRQLDQRISGRERSSFGFAHRIHLYSDY  120 (351)
Q Consensus        42 ~~~i~~~~Y~i~~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~~~e~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  120 (351)
                      ..++...+..+.++||+|-||.|.+|..  ..+..||+|.++.+..... +-+....+.+....+|+++.+..++..++.
T Consensus       532 l~EfPRs~L~~~ekiGeGqFGEVhLCev--eg~lkVAVK~Lr~~a~~~~r~~F~kEIkiLsqLkhPNIveLvGVC~~DeP  609 (807)
T KOG1094|consen  532 LVEFPRSRLRFKEKIGEGQFGEVHLCEV--EGPLKVAVKILRPDATKNARNDFLKEIKILSRLKHPNIVELLGVCVQDDP  609 (807)
T ss_pred             hhhcchhheehhhhhcCcccceeEEEEe--cCceEEEEeecCcccchhHHHHHHHHHHHHhccCCCCeeEEEeeeecCCc
Confidence            4456678899999999999999999984  3368999999987654322 223333344455689999999999999999


Q ss_pred             eEEEEEecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeeccCCCCC
Q 018699          121 SILVCDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSGP  200 (351)
Q Consensus       121 ~~lv~e~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~~~~~  200 (351)
                      +++|+||++.|+|.+++....  -..+.......|++||+.|++||.+-++|||||.+.|++++                
T Consensus       610 icmI~EYmEnGDLnqFl~ahe--apt~~t~~~vsi~tqiasgmaYLes~nfVHrd~a~rNcLv~----------------  671 (807)
T KOG1094|consen  610 LCMITEYMENGDLNQFLSAHE--LPTAETAPGVSICTQIASGMAYLESLNFVHRDLATRNCLVD----------------  671 (807)
T ss_pred             hHHHHHHHhcCcHHHHHHhcc--CcccccchhHHHHHHHHHHHHHHHhhchhhccccccceeec----------------
Confidence            999999999999999998852  12345566778999999999999999999999999999999                


Q ss_pred             cccCCeEEeecCCccccccCCCCccc-cccccCCCcccceeccCCCCCccchHhHHHHHHHHHH--hCccccccccCCC-
Q 018699          201 WQDQGLCLVDWGRGIDLHLFPDNMEF-EGDCRTSGFRCIEMQEKKPWKFQVDTYGLCAIVHMML--HNSYMEIEKKASP-  276 (351)
Q Consensus       201 ~~~~~~~l~Dfg~a~~~~~~~~~~~~-~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~l~--~g~~p~~~~~~~~-  276 (351)
                       .++++||+|||+++....- +.... ...+-...|||+|.+.-..++.++|+|++|+++||++  +...||...+... 
T Consensus       672 -~e~~iKiadfgmsR~lysg-~yy~vqgr~vlpiRwmawEsillgkFttaSDvWafgvTlwE~~~~C~e~Py~~lt~e~v  749 (807)
T KOG1094|consen  672 -GEFTIKIADFGMSRNLYSG-DYYRVQGRAVLPIRWMAWESILLGKFTTASDVWAFGVTLWEVFMLCREQPYSQLTDEQV  749 (807)
T ss_pred             -CcccEEecCcccccccccC-CceeeecceeeeeeehhHHHHHhccccchhhhhhhHHHHHHHHHHHhhCchhhhhHHHH
Confidence             8899999999999743211 11112 2234467899999999999999999999999999987  4567876543320 


Q ss_pred             ---CCcee----eecCcchhhhhHHHHHHHHHHHHhcCCCCCChHHHHHHHHHHH
Q 018699          277 ---DGGLV----YLPKLSFKRYWKVELWKSLFTNLLNMSSGNDKEVLQNLQKSFQ  324 (351)
Q Consensus       277 ---~~~~~----~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~~~~~  324 (351)
                         .+.+.    ...-.+.|..+. ..+-++|.+||..|-.+||+.+++-.+..+
T Consensus       750 ven~~~~~~~~~~~~~l~~P~~cp-~~lyelml~Cw~~es~~RPsFe~lh~~lq~  803 (807)
T KOG1094|consen  750 VENAGEFFRDQGRQVVLSRPPACP-QGLYELMLRCWRRESEQRPSFEQLHLFLQE  803 (807)
T ss_pred             HHhhhhhcCCCCcceeccCCCcCc-HHHHHHHHHHhchhhhcCCCHHHHHHHHHH
Confidence               01100    011122333444 677899999999999999999998766433

>KOG4278 consensus Protein tyrosine kinase [Signal transduction mechanisms]

Probab=99.97  E-value=3.4e-31  Score=241.88  Aligned_cols=274  Identities=13%  Similarity=0.152  Sum_probs=209.8

Q ss_pred             CcceEEEEcCeeEEEEEEeeccCceEEEEEEecCCCCceEEEEecCCCCChHHHHHHHHHhhhccccccccccceeeecc
Q 018699           38 SRNKTIEIGGKKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFPWEFYMYRQLDQRISGRERSSFGFAHRIHLY  117 (351)
Q Consensus        38 ~~~~~~~i~~~~Y~i~~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~  117 (351)
                      .....+++...+....++||-|.||.||.|.|+.. .--||||.++.+.. +.+.+.........+.|++++.+..++..
T Consensus       257 Pn~DkWEmeRtdItMkhKLGGGQYGeVYeGvWKky-slTvAVKtLKEDtM-eveEFLkEAAvMKeikHpNLVqLLGVCT~  334 (1157)
T KOG4278|consen  257 PNADKWEMERTDITMKHKLGGGQYGEVYEGVWKKY-SLTVAVKTLKEDTM-EVEEFLKEAAVMKEIKHPNLVQLLGVCTH  334 (1157)
T ss_pred             CCcchhhccchheeeeeccCCCcccceeeeeeecc-ceeeehhhhhhcch-hHHHHHHHHHHHHhhcCccHHHHhhhhcc
Confidence            34456777778888999999999999999999543 46799999886643 33333333344556788999999999999


Q ss_pred             cCeeEEEEEecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeeccCC
Q 018699          118 SDYSILVCDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDR  197 (351)
Q Consensus       118 ~~~~~lv~e~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~~  197 (351)
                      +..+|||+|||..|+|.+++..+.  ...++.-..++++.||..|+.||..+++|||||...|.++.             
T Consensus       335 EpPFYIiTEfM~yGNLLdYLRecn--r~ev~avvLlyMAtQIsSaMeYLEkknFIHRDLAARNCLVg-------------  399 (1157)
T KOG4278|consen  335 EPPFYIITEFMCYGNLLDYLRECN--RSEVPAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVG-------------  399 (1157)
T ss_pred             CCCeEEEEecccCccHHHHHHHhc--hhhcchhHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhcccc-------------
Confidence            999999999999999999999874  23567777889999999999999999999999999999999             


Q ss_pred             CCCcccCCeEEeecCCccccccCCCCcccccccc---CCCcccceeccCCCCCccchHhHHHHHHHHHHh-Ccccccccc
Q 018699          198 SGPWQDQGLCLVDWGRGIDLHLFPDNMEFEGDCR---TSGFRCIEMQEKKPWKFQVDTYGLCAIVHMMLH-NSYMEIEKK  273 (351)
Q Consensus       198 ~~~~~~~~~~l~Dfg~a~~~~~~~~~~~~~~~~g---~~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~-g~~p~~~~~  273 (351)
                          .+..+|++|||+++.+.    +..+....|   ...|.|||.+....++.++|||+|||+|||+.| |..||..-+
T Consensus       400 ----EnhiVKvADFGLsRlMt----gDTYTAHAGAKFPIKWTAPEsLAyNtFSiKSDVWAFGVLLWEIATYGMsPYPGid  471 (1157)
T KOG4278|consen  400 ----ENHIVKVADFGLSRLMT----GDTYTAHAGAKFPIKWTAPESLAYNTFSIKSDVWAFGVLLWEIATYGMSPYPGID  471 (1157)
T ss_pred             ----ccceEEeeccchhhhhc----CCceecccCccCcccccCcccccccccccchhhHHHHHHHHHHHhcCCCCCCCcc
Confidence                78889999999997654    333333334   346999999999999999999999999999995 556664322


Q ss_pred             CC-----CCCceeeecCcchhhhhHHHHHHHHHHHHhcCCCCCChHHHHHHHHHHHHHHhhChHHHHHHHHHHHH
Q 018699          274 AS-----PDGGLVYLPKLSFKRYWKVELWKSLFTNLLNMSSGNDKEVLQNLQKSFQDYLCSNPQLLKNLKELLAK  343 (351)
Q Consensus       274 ~~-----~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~~~~~~~~~~~~~~~~~~~~~~~~  343 (351)
                      -.     .+..|.+..    |+.+. +.+-+||+.||+..|..||+++++- ..||..+.+.. +....+.-|.+
T Consensus       472 lSqVY~LLEkgyRM~~----PeGCP-pkVYeLMraCW~WsPsDRPsFaeiH-qafEtmf~~sS-isdEV~keLgk  539 (1157)
T KOG4278|consen  472 LSQVYGLLEKGYRMDG----PEGCP-PKVYELMRACWNWSPSDRPSFAEIH-QAFETMFSSSS-ISDEVQKELGK  539 (1157)
T ss_pred             HHHHHHHHhccccccC----CCCCC-HHHHHHHHHHhcCCcccCccHHHHH-HHHHHHhcccc-ccHHHHHHHhh
Confidence            11     122333333    33344 7888999999999999999999873 34555554443 44444444444

>KOG1166 consensus Mitotic checkpoint serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=99.97  E-value=5.8e-30  Score=250.73  Aligned_cols=272  Identities=40%  Similarity=0.751  Sum_probs=233.1

Q ss_pred             CCcceEEEEcCeeEEEEEEeeccCceEEEEEEecCCCCceEEEEecCCCCChHHHHHHHHHhhhccccccccccceeeec
Q 018699           37 SSRNKTIEIGGKKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFPWEFYMYRQLDQRISGRERSSFGFAHRIHL  116 (351)
Q Consensus        37 ~~~~~~~~i~~~~Y~i~~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~  116 (351)
                      ...+....+.|..|.|.+.||.|+||.||.|.. .+ |+.||+|+.+++..||+++-.++..++.....+.+..+...+.
T Consensus       687 l~~~~~~~~~~~~~~I~~e~G~g~y~~vy~a~~-~~-~~~~alK~e~P~~~WEfYI~~q~~~RLk~~~~~~~~~~~~a~~  764 (974)
T KOG1166|consen  687 LNPNTEFEVGGEKFCISKEIGEGSYGSVYVATH-SN-GKLVALKVEKPPNPWEFYICLQVMERLKPQMLPSIMHISSAHV  764 (974)
T ss_pred             cCccceeeecceeEEEEeeeccccceEEEEeec-CC-CcEEEEEeecCCCceeeeehHHHHHhhchhhhcchHHHHHHHc
Confidence            334567889999999999999999999999994 44 9999999999999999999999998887555566777777777


Q ss_pred             ccCeeEEEEEecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeeccC
Q 018699          117 YSDYSILVCDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHD  196 (351)
Q Consensus       117 ~~~~~~lv~e~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~  196 (351)
                      +.+..++|+||.+.|+|.++++.    .+.+++..+..++.|++..+.+||..+||||||||+|++|...-..       
T Consensus       765 ~~~~S~lv~ey~~~Gtlld~~N~----~~~m~e~lv~~~~~qml~ive~lH~~~IIHgDiKPDNfll~~~~~~-------  833 (974)
T KOG1166|consen  765 FQNASVLVSEYSPYGTLLDLINT----NKVMDEYLVMFFSCQMLRIVEHLHAMGIIHGDIKPDNFLLRREICA-------  833 (974)
T ss_pred             cCCcceeeeeccccccHHHhhcc----CCCCCchhhhHHHHHHHHHHHHHHhcceecccCCcceeEeecccCC-------
Confidence            78888999999999999999995    6889999999999999999999999999999999999999853321       


Q ss_pred             CCCCcccCCeEEeecCCccccccCCCCccccccccCCCcccceeccCCCCCccchHhHHHHHHHHHHhCccccccccCCC
Q 018699          197 RSGPWQDQGLCLVDWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQEKKPWKFQVDTYGLCAIVHMMLHNSYMEIEKKASP  276 (351)
Q Consensus       197 ~~~~~~~~~~~l~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~p~~~~~~~~  276 (351)
                         .+....++|+|||.+..+..++++..+...++|-.+-++|+..|.+|+..+|.|.|+.+++.|++|.+...      
T Consensus       834 ---~~~~~~l~lIDfG~siDm~lfp~~~~F~~~~~td~f~C~EM~~grpWtYq~DyfGlAa~~h~mLFG~y~q~------  904 (974)
T KOG1166|consen  834 ---DSDSKGLYLIDFGRSIDMKLFPDGTKFKAVWHTDLFDCIEMREGRPWTYQIDYFGLAATVHVMLFGKYMEV------  904 (974)
T ss_pred             ---CCcccceEEEecccceeeeEcCCCcEEeeeeccccchhHHHhcCCCCchhhhhHHHHHHHHHHHHHHHHHh------
Confidence               12467799999999999999999999999999999999999999999999999999999999999987771      


Q ss_pred             CCceeeecCcchhhhhHHHHHHHHHHHHhcCCCCCC-hHHHHHHHHHHHHHHhhChH
Q 018699          277 DGGLVYLPKLSFKRYWKVELWKSLFTNLLNMSSGND-KEVLQNLQKSFQDYLCSNPQ  332 (351)
Q Consensus       277 ~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R-~s~~e~l~~~~~~~~~~~~~  332 (351)
                      .....+.....++++|..+.+-+|...+|+  |+.+ .+..+.|+..|+.+|....+
T Consensus       905 ~~g~~~~~~~~~~Ry~~~~~W~~~F~~lLN--~~~~~~p~l~~lr~~~~~~~~~~~~  959 (974)
T KOG1166|consen  905 KNGSSWMVKTNFPRYWKRDMWNKFFDLLLN--PDCDTLPNLQELRTELEEVLAEHFT  959 (974)
T ss_pred             cCCcceeccccchhhhhHHHHHHHHHHHhC--cCcccchhHHHHHHHHHHHHHHHHH
Confidence            222234444448999998999999999999  4443 45677778888877777666

>KOG0196 consensus Tyrosine kinase, EPH (ephrin) receptor family [Signal transduction mechanisms]

Probab=99.97  E-value=1.1e-31  Score=250.75  Aligned_cols=266  Identities=15%  Similarity=0.168  Sum_probs=211.2

Q ss_pred             eEEEEcCeeEEEEEEeeccCceEEEEEEecCC--CCceEEEEecCCCCChHHHHHHHHHh--hhccccccccccceeeec
Q 018699           41 KTIEIGGKKYQIKGCAGQGGFAKVFKAYVNGD--PEDVVALKIQKPAFPWEFYMYRQLDQ--RISGRERSSFGFAHRIHL  116 (351)
Q Consensus        41 ~~~~i~~~~Y~i~~~lg~G~~g~V~~a~~~~~--~~~~vaiK~~~~~~~~e~~~~~~~~~--~~~~~~~~~~~~~~~~~~  116 (351)
                      ...+|.-..-.|.++||.|.||.|++|+.+..  ....||||.++.... |......+.+  ..-+-.|+|+.++..+..
T Consensus       622 FakEId~s~i~Ie~VIGaGEFGEVc~GrLk~pgkre~~VAIKTLK~Gyt-ekqrrdFL~EAsIMGQFdHPNIIrLEGVVT  700 (996)
T KOG0196|consen  622 FAKEIDPSCVKIEKVIGAGEFGEVCSGRLKLPGKREITVAIKTLKAGYT-EKQRRDFLSEASIMGQFDHPNIIRLEGVVT  700 (996)
T ss_pred             hhhhcChhheEEEEEEecccccceecccccCCCCcceeEEEeeeccCcc-HHHHhhhhhhhhhcccCCCCcEEEEEEEEe
Confidence            35567777889999999999999999997432  346899999987653 2222222222  223446889999999998


Q ss_pred             ccCeeEEEEEecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeeccC
Q 018699          117 YSDYSILVCDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHD  196 (351)
Q Consensus       117 ~~~~~~lv~e~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~  196 (351)
                      ......+|+|||++|+|..++...   ++.|+..+..-+++.|+.|++||.+.|.|||||...|||++            
T Consensus       701 ks~PvMIiTEyMENGsLDsFLR~~---DGqftviQLVgMLrGIAsGMkYLsdm~YVHRDLAARNILVN------------  765 (996)
T KOG0196|consen  701 KSKPVMIITEYMENGSLDSFLRQN---DGQFTVIQLVGMLRGIASGMKYLSDMNYVHRDLAARNILVN------------  765 (996)
T ss_pred             cCceeEEEhhhhhCCcHHHHHhhc---CCceEeehHHHHHHHHHHHhHHHhhcCchhhhhhhhheeec------------
Confidence            889999999999999999999987   57799999999999999999999999999999999999999            


Q ss_pred             CCCCcccCCeEEeecCCccccccCCCCcccccccc--CCCcccceeccCCCCCccchHhHHHHHHHHHH-hCcccccccc
Q 018699          197 RSGPWQDQGLCLVDWGRGIDLHLFPDNMEFEGDCR--TSGFRCIEMQEKKPWKFQVDTYGLCAIVHMML-HNSYMEIEKK  273 (351)
Q Consensus       197 ~~~~~~~~~~~l~Dfg~a~~~~~~~~~~~~~~~~g--~~~y~aPE~~~~~~~~~~~DiwslG~il~~l~-~g~~p~~~~~  273 (351)
                           ++..+|++|||+++.....++ ..+.+.-|  ...|.|||.+.-.+++.++||||+|+++||.+ .|.-||...+
T Consensus       766 -----snLvCKVsDFGLSRvledd~~-~~ytt~GGKIPiRWTAPEAIa~RKFTsASDVWSyGIVmWEVmSyGERPYWdmS  839 (996)
T KOG0196|consen  766 -----SNLVCKVSDFGLSRVLEDDPE-AAYTTLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMS  839 (996)
T ss_pred             -----cceEEEeccccceeecccCCC-ccccccCCccceeecChhHhhhcccCchhhccccceEEEEecccCCCcccccc
Confidence                 888999999999986654432 22232222  34699999999999999999999999999977 7888988765


Q ss_pred             CC-----CCCceeeecCcchhhhhHHHHHHHHHHHHhcCCCCCChHHHHHHHHHHHHHHhhChHHHH
Q 018699          274 AS-----PDGGLVYLPKLSFKRYWKVELWKSLFTNLLNMSSGNDKEVLQNLQKSFQDYLCSNPQLLK  335 (351)
Q Consensus       274 ~~-----~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~~~~~~~~~~~~~~~~  335 (351)
                      ..     .+..|..+++...|     ..+..|+..||++|-++||.+.|++...  +.+-.+|..++
T Consensus       840 NQdVIkaIe~gyRLPpPmDCP-----~aL~qLMldCWqkdR~~RP~F~qiV~~l--DklIrnP~SLk  899 (996)
T KOG0196|consen  840 NQDVIKAIEQGYRLPPPMDCP-----AALYQLMLDCWQKDRNRRPKFAQIVSTL--DKLIRNPNSLK  899 (996)
T ss_pred             hHHHHHHHHhccCCCCCCCCc-----HHHHHHHHHHHHHHhhcCCCHHHHHHHH--HHHhcCchhhc
Confidence            54     23445556666666     7788999999999999999999998753  44555555443

>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]

Probab=99.97  E-value=3.2e-32  Score=250.36  Aligned_cols=270  Identities=20%  Similarity=0.198  Sum_probs=219.2

Q ss_pred             CeeEEEEEEeeccCceEEEEEEecCCCCceEEEEecCCCCChHHHHHHHHHhhhccccccccccceeeecccCeeEEEEE
Q 018699           47 GKKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFPWEFYMYRQLDQRISGRERSSFGFAHRIHLYSDYSILVCD  126 (351)
Q Consensus        47 ~~~Y~i~~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e  126 (351)
                      .++|++...+|+|+||.||+|+ +..+++..|+|+++-.....+...++..-......|++++..+.-..-.+.+++.||
T Consensus        14 ~ddyellqrvgsgTygdvyKaR-d~~s~elaavkvVkLep~dd~~~iqqei~~~~dc~h~nivay~gsylr~dklwicME   92 (829)
T KOG0576|consen   14 QDDYELLQRVGSGTYGDVYKAR-DKRSGELAAVKVVKLEPGDDFSGIQQEIGMLRDCRHPNIVAYFGSYLRRDKLWICME   92 (829)
T ss_pred             ccchhheeeecCCcccchhhhc-ccccCchhhheeeeccCCccccccccceeeeecCCCcChHHHHhhhhhhcCcEEEEE
Confidence            4789999999999999999999 678899999999886655555554444445556677888877777777889999999


Q ss_pred             ecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeeccCCCCCcccCCe
Q 018699          127 YLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSGPWQDQGL  206 (351)
Q Consensus       127 ~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~~~~~~~~~~~  206 (351)
                      ||.||+|++...-    .+++++.++.+.++..+.|++|||++|-+|||||-.||++.                 ..+-+
T Consensus        93 ycgggslQdiy~~----TgplselqiayvcRetl~gl~ylhs~gk~hRdiKGanillt-----------------d~gDv  151 (829)
T KOG0576|consen   93 YCGGGSLQDIYHV----TGPLSELQIAYVCRETLQGLKYLHSQGKIHRDIKGANILLT-----------------DEGDV  151 (829)
T ss_pred             ecCCCcccceeee----cccchhHHHHHHHhhhhccchhhhcCCcccccccccceeec-----------------ccCce
Confidence            9999999998776    47999999999999999999999999999999999999999                 77889


Q ss_pred             EEeecCCccccccCCCCccccccccCCCcccceec---cCCCCCccchHhHHHHHHHHHHhCccccccccCCC-----CC
Q 018699          207 CLVDWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQ---EKKPWKFQVDTYGLCAIVHMMLHNSYMEIEKKASP-----DG  278 (351)
Q Consensus       207 ~l~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~---~~~~~~~~~DiwslG~il~~l~~g~~p~~~~~~~~-----~~  278 (351)
                      ++.|||.+..++.+.  .+...+.||+.|||||+-   ....|...+|||++|++..++---++|-+...+..     ..
T Consensus       152 klaDfgvsaqitati--~KrksfiGtpywmapEvaaverkggynqlcdiwa~gitAiel~eLqpplfdlhpmr~l~LmTk  229 (829)
T KOG0576|consen  152 KLADFGVSAQITATI--AKRKSFIGTPYWMAPEVAAVERKGGYNQLCDIWALGITAIELGELQPPLFDLHPMRALFLMTK  229 (829)
T ss_pred             eecccCchhhhhhhh--hhhhcccCCccccchhHHHHHhcccccccccccccccchhhhhhcCCcccccchHHHHHHhhc
Confidence            999999886554332  234567899999999985   45678899999999999999998888865444331     12


Q ss_pred             ceeeecCcchhhhhHHHHHHHHHHHHhcCCCCCChHHHHHHHHHHHHHHhhChHHHHHHHHHHHHhh
Q 018699          279 GLVYLPKLSFKRYWKVELWKSLFTNLLNMSSGNDKEVLQNLQKSFQDYLCSNPQLLKNLKELLAKQR  345 (351)
Q Consensus       279 ~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~  345 (351)
                      ..-.++...-+..|+ +.+.+|++.+|.++|.+||+++.+|.|+|...-    .-.+-..++|.|-+
T Consensus       230 S~~qpp~lkDk~kws-~~fh~fvK~altknpKkRptaeklL~h~fvs~~----l~~rl~~eLLdK~n  291 (829)
T KOG0576|consen  230 SGFQPPTLKDKTKWS-EFFHNFVKGALTKNPKKRPTAEKLLQHPFVSQT----LSRRLAIELLDKVN  291 (829)
T ss_pred             cCCCCCcccCCccch-HHHHHHHHHHhcCCCccCCChhhheeceeeccc----hhhHHHHHHHHHcc
Confidence            222356666777898 999999999999999999999999999975433    44455556666644

>KOG0984 consensus Mitogen-activated protein kinase (MAPK) kinase MKK3/MKK6 [Signal transduction mechanisms]

Probab=99.97  E-value=2.3e-31  Score=212.87  Aligned_cols=209  Identities=17%  Similarity=0.153  Sum_probs=160.7

Q ss_pred             EEEcCeeEEEEEEeeccCceEEEEEEecCCCCceEEEEecCCCCChH--HHHHHHHHhhhccccccccccceeeecccCe
Q 018699           43 IEIGGKKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFPWE--FYMYRQLDQRISGRERSSFGFAHRIHLYSDY  120 (351)
Q Consensus        43 ~~i~~~~Y~i~~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~~~e--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  120 (351)
                      +++.-+...-...||+|++|.|=+-+ ...+|...|+|.+.....+.  ...+..+.-.......+..+++..-...++.
T Consensus        41 ~eV~ad~L~~i~elGrGayG~vekmr-h~~sg~imAvKri~~tvn~q~q~r~L~dldi~~r~~~CPf~V~FyGa~~regd  119 (282)
T KOG0984|consen   41 FEVPADDLVGIEELGRGAYGVVEKMR-HIQSGTIMAVKRIRATVNSQEQKRLLMDLDIIMRTVDCPFTVHFYGALFREGD  119 (282)
T ss_pred             cccchhhhhhhhhhcCCccchhhhee-eccCCeEEEEeeehhhcChHHHHHHHHhhhhhccCCCCCeEEEeehhhhcccc
Confidence            33444455557899999999998888 57889999999987664432  2333333332223333344444433344678


Q ss_pred             eEEEEEecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHC-CceecCCCCCcEEEeecCCcceeeccCCCC
Q 018699          121 SILVCDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDV-GIIHGDFKPDNLLIRYARDELTVLDHDRSG  199 (351)
Q Consensus       121 ~~lv~e~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~-~i~H~dl~p~Nill~~~~~~~~~~~~~~~~  199 (351)
                      .++.||.+ ..||..+.......+..+++..+-+|+..++.|+.|||++ .++|||+||+||+++               
T Consensus       120 vwIcME~M-~tSldkfy~~v~~~g~~ipE~vlGkIa~Svv~al~~L~~kL~vIHRDvKPsNiLIn---------------  183 (282)
T KOG0984|consen  120 VWICMELM-DTSLDKFYRKVLKKGGTIPEDVLGKIAVSVVHALEFLHSKLSVIHRDVKPSNILIN---------------  183 (282)
T ss_pred             EEEeHHHh-hhhHHHHHHHHHhcCCcCchHHhhHhHHHHHHHHHHHHHHhhhhhccCCcceEEEc---------------
Confidence            89999999 7799988887777789999999999999999999999998 899999999999999               


Q ss_pred             CcccCCeEEeecCCccccccCCCCccccccccCCCcccceecc----CCCCCccchHhHHHHHHHHHHhCcccccccc
Q 018699          200 PWQDQGLCLVDWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQE----KKPWKFQVDTYGLCAIVHMMLHNSYMEIEKK  273 (351)
Q Consensus       200 ~~~~~~~~l~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~----~~~~~~~~DiwslG~il~~l~~g~~p~~~~~  273 (351)
                        ..|.+|+||||++..+.   +.....-..|...|||||.+.    .+.|+.++||||||++++||.++++||....
T Consensus       184 --~~GqVKiCDFGIsG~L~---dSiAkt~daGCkpYmaPEri~~e~n~~gY~vksDvWSLGItmiElA~lr~PY~~w~  256 (282)
T KOG0984|consen  184 --YDGQVKICDFGISGYLV---DSIAKTMDAGCKPYMAPERINPELNQKGYSVKSDVWSLGITMIEMAILRFPYESWG  256 (282)
T ss_pred             --cCCcEEEcccccceeeh---hhhHHHHhcCCCccCChhhcCcccCcccceeehhhhhhhhhhhhhhhccccccccC
Confidence              78999999999885432   222233356889999999973    3578999999999999999999999987543

>KOG1152 consensus Signal transduction serine/threonine kinase with PAS/PAC sensor domain [Signal transduction mechanisms]

Probab=99.96  E-value=3e-30  Score=233.98  Aligned_cols=197  Identities=17%  Similarity=0.155  Sum_probs=168.9

Q ss_pred             eeEEEEEEeeccCceEEEEEEecCCCCceEEEEecCCCC-----------ChHHHHHHHHHhhhccccccccccceeeec
Q 018699           48 KKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAF-----------PWEFYMYRQLDQRISGRERSSFGFAHRIHL  116 (351)
Q Consensus        48 ~~Y~i~~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~-----------~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~  116 (351)
                      ..|...+.+|.|+||.||+|.++ .+...|+||.+.++.           ...+...-++.+.+....|+++..+.+++.
T Consensus       561 s~yttlq~lG~GAyGkV~lai~K-~n~~eVViK~I~KeRIL~DtWvrDrkLGtVp~EIqIla~l~~~sH~NIlKlLdfFE  639 (772)
T KOG1152|consen  561 SDYTTLQPLGEGAYGKVNLAIHK-ENNYEVVIKMIFKERILVDTWVRDRKLGTVPSEIQILATLNKHSHENILKLLDFFE  639 (772)
T ss_pred             ccceeeeeccccccceEEEeeec-ccceEEEeeehhhhhhhhhhhhcccccCccchhHHHHHHhhhcCccchhhhhheee
Confidence            56999999999999999999964 557899999877542           122334445556666677889999999999


Q ss_pred             ccCeeEEEEEec-CCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeecc
Q 018699          117 YSDYSILVCDYL-SQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDH  195 (351)
Q Consensus       117 ~~~~~~lv~e~~-~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~  195 (351)
                      ..+++|++||.. +|.+|.+++..    .+.+++.++..|++|++.|+++||++||+|||||-+|+.++           
T Consensus       640 ddd~yyl~te~hg~gIDLFd~IE~----kp~m~E~eAk~IFkQV~agi~hlh~~~ivhrdikdenvivd-----------  704 (772)
T KOG1152|consen  640 DDDYYYLETEVHGEGIDLFDFIEF----KPRMDEPEAKLIFKQVVAGIKHLHDQGIVHRDIKDENVIVD-----------  704 (772)
T ss_pred             cCCeeEEEecCCCCCcchhhhhhc----cCccchHHHHHHHHHHHhccccccccCceecccccccEEEe-----------
Confidence            999999999986 45688999987    58899999999999999999999999999999999999999           


Q ss_pred             CCCCCcccCCeEEeecCCccccccCCCCccccccccCCCcccceeccCCCCC-ccchHhHHHHHHHHHHhCccccc
Q 018699          196 DRSGPWQDQGLCLVDWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQEKKPWK-FQVDTYGLCAIVHMMLHNSYMEI  270 (351)
Q Consensus       196 ~~~~~~~~~~~~l~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~-~~~DiwslG~il~~l~~g~~p~~  270 (351)
                            ++|-+||+|||.|...    .+-++..++||..|.|||++.|.+|- ...|||+||+++|.+.....||.
T Consensus       705 ------~~g~~klidfgsaa~~----ksgpfd~f~gtv~~aapevl~g~~y~gk~qdiwalgillytivykenpyy  770 (772)
T KOG1152|consen  705 ------SNGFVKLIDFGSAAYT----KSGPFDVFVGTVDYAAPEVLGGEKYLGKPQDIWALGILLYTIVYKENPYY  770 (772)
T ss_pred             ------cCCeEEEeeccchhhh----cCCCcceeeeeccccchhhhCCCccCCCcchhhhhhheeeEEEeccCCCc
Confidence                  8999999999987542    35567778899999999999998884 88999999999999998888875

>KOG1167 consensus Serine/threonine protein kinase of the CDC7 subfamily involved in DNA synthesis, repair and recombination [Replication, recombination and repair]

Probab=99.96  E-value=5.1e-30  Score=225.13  Aligned_cols=258  Identities=21%  Similarity=0.243  Sum_probs=184.3

Q ss_pred             CeeEEEEEEeeccCceEEEEEEecCC---CCceEEEEecCCCCChHHHHHHHHHhhhccccccccccceeeecccCeeEE
Q 018699           47 GKKYQIKGCAGQGGFAKVFKAYVNGD---PEDVVALKIQKPAFPWEFYMYRQLDQRISGRERSSFGFAHRIHLYSDYSIL  123 (351)
Q Consensus        47 ~~~Y~i~~~lg~G~~g~V~~a~~~~~---~~~~vaiK~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  123 (351)
                      .+.|.++++||.|+|++||+|.+ ..   .+++||+|.+.....- ..+..++.-......+.++.........++..++
T Consensus        35 ~~~~~~v~kigeGsFssv~~a~~-~~~~~~~~~valk~i~~ts~p-~ri~~El~~L~~~gG~~ni~~~~~~~rnnd~v~i  112 (418)
T KOG1167|consen   35 SNAYKVVNKIGEGSFSSVYKATD-IEQDTKRRYVALKAIYRTSSP-SRILNELEMLYRLGGSDNIIKLNGCFRNNDQVAI  112 (418)
T ss_pred             hhhhhhhccccccchhhhhhhhH-hhhccccceEeeeecccccCc-hHHHHHHHHHHHhccchhhhcchhhhccCCeeEE
Confidence            46799999999999999999995 44   7899999987654221 1222222222233444566666666677899999


Q ss_pred             EEEecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeeccCCCCCccc
Q 018699          124 VCDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSGPWQD  203 (351)
Q Consensus       124 v~e~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~~~~~~~~  203 (351)
                      |+||++.....++...       ++-..+..+++.++.||+++|.+|||||||||.|++.+.....              
T Consensus       113 vlp~~~H~~f~~l~~~-------l~~~~i~~Yl~~ll~Al~~~h~~GIvHRDiKpsNFL~n~~t~r--------------  171 (418)
T KOG1167|consen  113 VLPYFEHDRFRDLYRS-------LSLAEIRWYLRNLLKALAHLHKNGIVHRDIKPSNFLYNRRTQR--------------  171 (418)
T ss_pred             EecccCccCHHHHHhc-------CCHHHHHHHHHHHHHHhhhhhccCccccCCCccccccccccCC--------------
Confidence            9999999888888764       5577888999999999999999999999999999999975544              


Q ss_pred             CCeEEeecCCccccc-----------------c---------------CCC----------CccccccccCCCcccceec
Q 018699          204 QGLCLVDWGRGIDLH-----------------L---------------FPD----------NMEFEGDCRTSGFRCIEMQ  241 (351)
Q Consensus       204 ~~~~l~Dfg~a~~~~-----------------~---------------~~~----------~~~~~~~~g~~~y~aPE~~  241 (351)
                        -.|+|||+|....                 .               .+.          ........||++|.|||++
T Consensus       172 --g~LvDFgLA~~~d~~~~~~~s~~~~~~~~~~~~g~~~~~~~~~~~~~p~g~~~~~~~~r~~~~anrAGT~GfRaPEvL  249 (418)
T KOG1167|consen  172 --GVLVDFGLAQRYDGYQQTEHSRSYSGRHATPAMGKDVHCQSVATASKPAGYYRRCNDGRPSERANRAGTPGFRAPEVL  249 (418)
T ss_pred             --ceEEechhHHHHHhhhhhhhhhhhhcccCCccccCcccccccccccCCCCceeccCCCccceecccCCCCCCCchHHH
Confidence              4567777664100                 0               000          0112234599999999998


Q ss_pred             cC-CCCCccchHhHHHHHHHHHHhCccccccccCCCC---------------------Cc--eee---------------
Q 018699          242 EK-KPWKFQVDTYGLCAIVHMMLHNSYMEIEKKASPD---------------------GG--LVY---------------  282 (351)
Q Consensus       242 ~~-~~~~~~~DiwslG~il~~l~~g~~p~~~~~~~~~---------------------~~--~~~---------------  282 (351)
                      .+ ...+.++||||.|+|+..++++.+||.....+..                     +.  +..               
T Consensus       250 ~k~~~QttaiDiws~GVI~Lslls~~~PFf~a~dd~~al~ei~tifG~~~mrk~A~l~g~~~l~~ksn~~~~~e~~~~f~  329 (418)
T KOG1167|consen  250 FRCPRQTTAIDIWSAGVILLSLLSRRYPFFKAKDDADALAEIATIFGSAEMRKCAALPGRILLWQKSNIPTIPELRVNFE  329 (418)
T ss_pred             hhccCcCCccceeeccceeehhhccccccccCccccchHHHHHHHhChHHHHHHhhcCCceeeeccccccccHHHHhchh
Confidence            65 4568999999999999999999999875443311                     11  000               


Q ss_pred             --------ecCc--chhhhhHH---HHHHHHHHHHhcCCCCCChHHHHHHHHHHHHHHhh
Q 018699          283 --------LPKL--SFKRYWKV---ELWKSLFTNLLNMSSGNDKEVLQNLQKSFQDYLCS  329 (351)
Q Consensus       283 --------~~~~--~~~~~~~~---~~~~~li~~~L~~dP~~R~s~~e~l~~~~~~~~~~  329 (351)
                              ....  .....|..   ..+.+|+.+||..||.+|++++++|.|+|.+-...
T Consensus       330 s~~~~~~~~~~q~n~~~~~~~d~~~~~~~dlLdk~le~np~kRitAEeALkHpFF~~~~~  389 (418)
T KOG1167|consen  330 TLHIESIYKSRQPNTEREIGSDVFPALLLDLLDKCLELNPQKRITAEDALKHPFFDEADR  389 (418)
T ss_pred             ccChhhcccccccceeeccccccccHHHHHHHHHHccCChhhcccHHHHhcCcCCcchhh
Confidence                    0000  01111111   46889999999999999999999999998763333

>cd00180 PKc Catalytic domain of Protein Kinases

Probab=99.96  E-value=7.2e-28  Score=203.77  Aligned_cols=210  Identities=22%  Similarity=0.274  Sum_probs=168.0

Q ss_pred             eeccCceEEEEEEecCCCCceEEEEecCCCCCh--HHHHHHHHHhhhccccccccccceeeecccCeeEEEEEecCCCCH
Q 018699           56 AGQGGFAKVFKAYVNGDPEDVVALKIQKPAFPW--EFYMYRQLDQRISGRERSSFGFAHRIHLYSDYSILVCDYLSQGTL  133 (351)
Q Consensus        56 lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~~~--e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~sL  133 (351)
                      ||.|++|.||++. ...+++.+++|++......  .....+++ .......++++.............++++|++.+++|
T Consensus         1 l~~g~~~~v~~~~-~~~~~~~~~~K~~~~~~~~~~~~~~~~e~-~~~~~l~~~~i~~~~~~~~~~~~~~~~~e~~~~~~l   78 (215)
T cd00180           1 LGEGGFGTVYLAR-DKKTGKKVAIKIIKKEDSSSLLEELLREI-EILKKLNHPNIVKLYGVFEDENHLYLVMEYCEGGSL   78 (215)
T ss_pred             CCcCCceEEEEEE-ecCCCcEEEEEEeccccchhHHHHHHHHH-HHHHhcCCCCeeeEeeeeecCCeEEEEEecCCCCcH
Confidence            6899999999999 4556899999998876542  11222222 222333446677777777767889999999988999


Q ss_pred             HHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeeccCCCCCcc-cCCeEEeecC
Q 018699          134 QDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSGPWQ-DQGLCLVDWG  212 (351)
Q Consensus       134 ~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~~~~~~~-~~~~~l~Dfg  212 (351)
                      .+++...   ...++...++.++.+++.++.+||+.|++|+||+|.||+++                 . .+.++|+|||
T Consensus        79 ~~~~~~~---~~~~~~~~~~~~~~~l~~~l~~lh~~~~~H~dl~~~ni~~~-----------------~~~~~~~l~d~~  138 (215)
T cd00180          79 KDLLKEN---EGKLSEDEILRILLQILEGLEYLHSNGIIHRDLKPENILLD-----------------SDNGKVKLADFG  138 (215)
T ss_pred             HHHHHhc---cCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHhhEEEe-----------------CCCCcEEEecCC
Confidence            9998863   24688999999999999999999999999999999999999                 5 5679999999


Q ss_pred             CccccccCCCCccccccccCCCcccceeccCC-CCCccchHhHHHHHHHHHHhCccccccccCCCCCceeeecCcchhhh
Q 018699          213 RGIDLHLFPDNMEFEGDCRTSGFRCIEMQEKK-PWKFQVDTYGLCAIVHMMLHNSYMEIEKKASPDGGLVYLPKLSFKRY  291 (351)
Q Consensus       213 ~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~-~~~~~~DiwslG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~  291 (351)
                      .+........  ......+...|++||..... .++.++|+|++|++++++                             
T Consensus       139 ~~~~~~~~~~--~~~~~~~~~~~~~pe~~~~~~~~~~~~D~~~lg~~~~~l-----------------------------  187 (215)
T cd00180         139 LSKLLTSDKS--LLKTIVGTPAYMAPEVLLGKGYYSEKSDIWSLGVILYEL-----------------------------  187 (215)
T ss_pred             ceEEccCCcc--hhhcccCCCCccChhHhcccCCCCchhhhHHHHHHHHHH-----------------------------
Confidence            8864332111  23334578889999998776 778999999999999999                             


Q ss_pred             hHHHHHHHHHHHHhcCCCCCChHHHHHHHH
Q 018699          292 WKVELWKSLFTNLLNMSSGNDKEVLQNLQK  321 (351)
Q Consensus       292 ~~~~~~~~li~~~L~~dP~~R~s~~e~l~~  321 (351)
                         ..+.+++..|+..||++||++.+++++
T Consensus       188 ---~~~~~~l~~~l~~~p~~R~~~~~l~~~  214 (215)
T cd00180         188 ---PELKDLIRKMLQKDPEKRPSAKEILEH  214 (215)
T ss_pred             ---HHHHHHHHHHhhCCcccCcCHHHHhhC
Confidence               467899999999999999999999875

Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which

>KOG0200 consensus Fibroblast/platelet-derived growth factor receptor and related receptor tyrosine kinases [Signal transduction mechanisms]

Probab=99.96  E-value=1.5e-28  Score=238.80  Aligned_cols=261  Identities=13%  Similarity=0.100  Sum_probs=196.7

Q ss_pred             EEEEcCeeEEEEEEeeccCceEEEEEEecCC------CCceEEEEecCCCCCh--HHHHHHHHHhhhcccccccccccee
Q 018699           42 TIEIGGKKYQIKGCAGQGGFAKVFKAYVNGD------PEDVVALKIQKPAFPW--EFYMYRQLDQRISGRERSSFGFAHR  113 (351)
Q Consensus        42 ~~~i~~~~Y~i~~~lg~G~~g~V~~a~~~~~------~~~~vaiK~~~~~~~~--e~~~~~~~~~~~~~~~~~~~~~~~~  113 (351)
                      .+++..++..+.+.||.|.||.||+|.-...      ....||||..+.....  ......++.-.-....|++++....
T Consensus       290 ~~e~~~~~l~~~~~lg~g~fG~v~~~~~~~~~~~~~~~~~~VaVK~~k~~~~~~~~~~~~~El~~m~~~g~H~niv~llG  369 (609)
T KOG0200|consen  290 KWEIPRENLKLGKYLGEGAFGQVVKALLFGLSKALLSIYVTVAVKMLKENASSSEKKDLMSELNVLKELGKHPNIVNLLG  369 (609)
T ss_pred             ceeechhhccccceeecccccceEeEEEeecccccccceEEEEEEecccccCcHHHHHHHHHHHHHHHhcCCcchhhhee
Confidence            7888888889999999999999999985321      2467999998755433  2333444444555667889999888


Q ss_pred             eecccCeeEEEEEecCCCCHHHHHHHHH---hhC---------CChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcE
Q 018699          114 IHLYSDYSILVCDYLSQGTLQDAINSYV---VIG---------KSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNL  181 (351)
Q Consensus       114 ~~~~~~~~~lv~e~~~~~sL~~~l~~~~---~~~---------~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Ni  181 (351)
                      ....++.+++|+||+..|+|..++...+   ...         ..++......++.||+.|++||++..++||||...||
T Consensus       370 ~~t~~~~~~~v~Ey~~~G~L~~~Lr~~r~~~~~~~~~~~~~~~~~L~~~dLlsfa~QIa~GMe~L~~~~~vHRDLAaRNV  449 (609)
T KOG0200|consen  370 ACTQDGPLYVIVEYAEHGDLLEFLRKKRVTESIDGSGVFPNERDALTTKDLLSFAYQIANGMEYLASVPCVHRDLAARNV  449 (609)
T ss_pred             eeccCCceEEEEEeccCCcHHHHHHhccccccccccCCCccccCCcCHHHHHHHHHHHHHHHHHHhhCCccchhhhhhhE
Confidence            8877899999999999999999998753   000         1388899999999999999999999999999999999


Q ss_pred             EEeecCCcceeeccCCCCCcccCCeEEeecCCccccccCCCCcccccccc--CCCcccceeccCCCCCccchHhHHHHHH
Q 018699          182 LIRYARDELTVLDHDRSGPWQDQGLCLVDWGRGIDLHLFPDNMEFEGDCR--TSGFRCIEMQEKKPWKFQVDTYGLCAIV  259 (351)
Q Consensus       182 ll~~~~~~~~~~~~~~~~~~~~~~~~l~Dfg~a~~~~~~~~~~~~~~~~g--~~~y~aPE~~~~~~~~~~~DiwslG~il  259 (351)
                      ++.                 .+..+||+|||+|+...... ........+  ...|||||.+....|+.++||||+|+++
T Consensus       450 Li~-----------------~~~~~kIaDFGlar~~~~~~-~y~~~~~~~~LP~kWmApEsl~~~~ft~kSDVWSfGI~L  511 (609)
T KOG0200|consen  450 LIT-----------------KNKVIKIADFGLARDHYNKD-YYRTKSSAGTLPVKWMAPESLFDRVFTSKSDVWSFGILL  511 (609)
T ss_pred             Eec-----------------CCCEEEEccccceeccCCCC-ceEecCCCCccceeecCHHHhccCcccccchhhHHHHHH
Confidence            999                 77789999999997422111 111111122  3349999999999999999999999999


Q ss_pred             HHHHhC-ccccccccCCC-CCcee-eecCcchhhhhHHHHHHHHHHHHhcCCCCCChHHHHHHHH
Q 018699          260 HMMLHN-SYMEIEKKASP-DGGLV-YLPKLSFKRYWKVELWKSLFTNLLNMSSGNDKEVLQNLQK  321 (351)
Q Consensus       260 ~~l~~g-~~p~~~~~~~~-~~~~~-~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~~  321 (351)
                      ||+++. ..|+..-.... -..+. ...+...|..+. +++-++|+.||+.+|+.||++.++...
T Consensus       512 ~EifsLG~~PYp~~~~~~~l~~~l~~G~r~~~P~~c~-~eiY~iM~~CW~~~p~~RP~F~~~~~~  575 (609)
T KOG0200|consen  512 WEIFTLGGTPYPGIPPTEELLEFLKEGNRMEQPEHCS-DEIYDLMKSCWNADPEDRPTFSECVEF  575 (609)
T ss_pred             HHHhhCCCCCCCCCCcHHHHHHHHhcCCCCCCCCCCC-HHHHHHHHHHhCCCcccCCCHHHHHHH
Confidence            999965 55665411000 01111 122334555555 788899999999999999999998653

>KOG1025 consensus Epidermal growth factor receptor EGFR and related tyrosine kinases [Signal transduction mechanisms]

Probab=99.96  E-value=5.7e-29  Score=233.56  Aligned_cols=249  Identities=13%  Similarity=0.142  Sum_probs=189.8

Q ss_pred             eeEEEEEEeeccCceEEEEEEecC---CCCceEEEEecCCCCCh--HHHHHHHHHhhhccccccccccceeeecccCeeE
Q 018699           48 KKYQIKGCAGQGGFAKVFKAYVNG---DPEDVVALKIQKPAFPW--EFYMYRQLDQRISGRERSSFGFAHRIHLYSDYSI  122 (351)
Q Consensus        48 ~~Y~i~~~lg~G~~g~V~~a~~~~---~~~~~vaiK~~~~~~~~--e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  122 (351)
                      -.....++||+|+||+||+|.|--   +-+-+||||++......  ..+++.+ .-.+....|+++..+..+..... +-
T Consensus       696 telkk~kvLGsgAfGtV~kGiw~Pege~vKipVaiKvl~~~t~~~~s~e~Lde-Al~masldHpnl~RLLgvc~~s~-~q  773 (1177)
T KOG1025|consen  696 TELKKDKVLGSGAFGTVYKGIWIPEGENVKIPVAIKVLIEFTSPKASIELLDE-ALRMASLDHPNLLRLLGVCMLST-LQ  773 (1177)
T ss_pred             hhhhhhceeccccceeEEeeeEecCCceecceeEEEEeeccCCchhhHHHHHH-HHHHhcCCCchHHHHhhhcccch-HH
Confidence            345567899999999999999922   22458899997755433  2333333 23345667888888877776444 77


Q ss_pred             EEEEecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeeccCCCCCcc
Q 018699          123 LVCDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSGPWQ  202 (351)
Q Consensus       123 lv~e~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~~~~~~~  202 (351)
                      +|++|++.|+|.++++..   ...+-....+.|..||+.|+.|||+++++||||...|||+.                 +
T Consensus       774 lvtq~mP~G~LlDyvr~h---r~~igsq~lLnw~~QIAkgM~YLe~qrlVHrdLaaRNVLVk-----------------s  833 (1177)
T KOG1025|consen  774 LVTQLMPLGCLLDYVREH---RDNIGSQDLLNWCYQIAKGMKYLEEQRLVHRDLAARNVLVK-----------------S  833 (1177)
T ss_pred             HHHHhcccchHHHHHHHh---hccccHHHHHHHHHHHHHHHHHHHhcchhhhhhhhhheeec-----------------C
Confidence            999999999999999986   46788888999999999999999999999999999999999                 5


Q ss_pred             cCCeEEeecCCccccccCCCCccccccc--cCCCcccceeccCCCCCccchHhHHHHHHHHHHh-CccccccccCC-CCC
Q 018699          203 DQGLCLVDWGRGIDLHLFPDNMEFEGDC--RTSGFRCIEMQEKKPWKFQVDTYGLCAIVHMMLH-NSYMEIEKKAS-PDG  278 (351)
Q Consensus       203 ~~~~~l~Dfg~a~~~~~~~~~~~~~~~~--g~~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~-g~~p~~~~~~~-~~~  278 (351)
                      -..+||.|||++....  +....+....  -.+.|||-|.+....|+.++||||+||++||++| |..|+...... ...
T Consensus       834 P~hvkitdfgla~ll~--~d~~ey~~~~gK~pikwmale~i~~~~~thqSDVWsfGVtiWElmTFGa~Py~gi~~~eI~d  911 (1177)
T KOG1025|consen  834 PNHVKITDFGLAKLLA--PDEKEYSAPGGKVPIKWMALESIRIRKYTHQSDVWSFGVTIWELMTFGAKPYDGIPAEEIPD  911 (1177)
T ss_pred             CCeEEEEecchhhccC--cccccccccccccCcHHHHHHHhhccCCCchhhhhhhhhhHHHHHhcCCCccCCCCHHHhhH
Confidence            5569999999997644  2333333322  2456999999999999999999999999999995 66777654322 122


Q ss_pred             ceeeecCcchhhhhHHHHHHHHHHHHhcCCCCCChHHHHHHHH
Q 018699          279 GLVYLPKLSFKRYWKVELWKSLFTNLLNMSSGNDKEVLQNLQK  321 (351)
Q Consensus       279 ~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~~  321 (351)
                      .+....+.+.|...+ -++--++.+||..|++.||++.++...
T Consensus       912 lle~geRLsqPpiCt-iDVy~~mvkCwmid~~~rp~fkel~~~  953 (1177)
T KOG1025|consen  912 LLEKGERLSQPPICT-IDVYMVMVKCWMIDADSRPTFKELAEE  953 (1177)
T ss_pred             HHhccccCCCCCCcc-HHHHHHHHHHhccCcccCccHHHHHHH
Confidence            223344455555566 677789999999999999999988764

>KOG1345 consensus Serine/threonine kinase [Signal transduction mechanisms]

Probab=99.96  E-value=3.7e-29  Score=207.95  Aligned_cols=240  Identities=16%  Similarity=0.166  Sum_probs=181.2

Q ss_pred             CeeEEEEEEeeccCceEEEEEEecCCCCceEEEEecCCCCChHHHHHHHHHhhhccccccccccceee-ecccCeeEEEE
Q 018699           47 GKKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFPWEFYMYRQLDQRISGRERSSFGFAHRI-HLYSDYSILVC  125 (351)
Q Consensus        47 ~~~Y~i~~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~lv~  125 (351)
                      -+.|.|.+.||.|.||.+-+|. ++.++..+|+|.+.++.....+..+++.-..-...|.++.....+ ++..+.+++++
T Consensus        23 ~d~y~I~k~lgeG~FgkIlL~e-Hr~s~t~ivlKavp~p~tt~~dF~rEfhY~~~Ls~H~hIi~tY~vaFqt~d~YvF~q  101 (378)
T KOG1345|consen   23 EDVYTINKQLGEGRFGKILLAE-HRQSKTRIVLKAVPRPQTTQADFVREFHYSFFLSPHQHIIDTYEVAFQTSDAYVFVQ  101 (378)
T ss_pred             hhhhhHHHHhcccceeeEEeee-ccCCceEEEeeccCcchhhHHHHHHHhccceeeccchhhhHHHHHHhhcCceEEEee
Confidence            3689999999999999999999 577889999999998877777777766654444555555444333 34567889999


Q ss_pred             EecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeeccCCCCCcccCC
Q 018699          126 DYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSGPWQDQG  205 (351)
Q Consensus       126 e~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~~~~~~~~~~  205 (351)
                      ||++.|+|.+-+..     ..+-+.....++.|+++|+.|||++++||||||.+||++...+               ...
T Consensus       102 E~aP~gdL~snv~~-----~GigE~~~K~v~~ql~SAi~fMHsknlVHRdlK~eNiLif~~d---------------f~r  161 (378)
T KOG1345|consen  102 EFAPRGDLRSNVEA-----AGIGEANTKKVFAQLLSAIEFMHSKNLVHRDLKAENILIFDAD---------------FYR  161 (378)
T ss_pred             ccCccchhhhhcCc-----ccccHHHHHHHHHHHHHHHHHhhccchhhcccccceEEEecCC---------------ccE
Confidence            99999999987765     3577888899999999999999999999999999999998543               246


Q ss_pred             eEEeecCCccccccCCCCccccccccCCCcccceeccCC-----CCCccchHhHHHHHHHHHHhCccccccccCCCCCce
Q 018699          206 LCLVDWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQEKK-----PWKFQVDTYGLCAIVHMMLHNSYMEIEKKASPDGGL  280 (351)
Q Consensus       206 ~~l~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~-----~~~~~~DiwslG~il~~l~~g~~p~~~~~~~~~~~~  280 (351)
                      +||||||..+...     .......-+..|.+||.+...     ...+.+|||.||+++|++++|.+||...... +..|
T Consensus       162 vKlcDFG~t~k~g-----~tV~~~~~~~~y~~pe~~~~~~ne~~~~~ps~D~WqfGIi~f~cltG~~PWQka~~~-d~~Y  235 (378)
T KOG1345|consen  162 VKLCDFGLTRKVG-----TTVKYLEYVNNYHAPELCDTVVNEKLVVNPSTDIWQFGIIFFYCLTGKFPWQKASIM-DKPY  235 (378)
T ss_pred             EEeeecccccccC-----ceehhhhhhcccCCcHHHhhccccceEecccccchheeeeeeeeecCCCcchhhhcc-CchH
Confidence            9999999876432     223333345668889886432     2357899999999999999999999855443 2111


Q ss_pred             ------eeecCcchhhh---hHHHHHHHHHHHHhcCCCCCChH
Q 018699          281 ------VYLPKLSFKRY---WKVELWKSLFTNLLNMSSGNDKE  314 (351)
Q Consensus       281 ------~~~~~~~~~~~---~~~~~~~~li~~~L~~dP~~R~s  314 (351)
                            ........|..   ++ +.+..+.++-|.++|++|..
T Consensus       236 ~~~~~w~~rk~~~~P~~F~~fs-~~a~r~Fkk~lt~~~~drck  277 (378)
T KOG1345|consen  236 WEWEQWLKRKNPALPKKFNPFS-EKALRLFKKSLTPRFKDRCK  277 (378)
T ss_pred             HHHHHHhcccCccCchhhcccC-HHHHHHHHHhcCCcccccch
Confidence                  11222223332   34 77889999999999999943

>smart00750 KIND kinase non-catalytic C-lobe domain

Probab=99.95  E-value=1.4e-27  Score=197.49  Aligned_cols=161  Identities=16%  Similarity=0.084  Sum_probs=125.5

Q ss_pred             CCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeeccCCCCCcccCCeEEee
Q 018699          131 GTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSGPWQDQGLCLVD  210 (351)
Q Consensus       131 ~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~~~~~~~~~~~~l~D  210 (351)
                      |+|.+++...   +..+++..++.++.|++.||.|||+++      ||+||+++                 .++.+++  
T Consensus         1 GsL~~~l~~~---~~~l~~~~~~~i~~qi~~~L~~lH~~~------kp~Nil~~-----------------~~~~~~~--   52 (176)
T smart00750        1 VSLADILEVR---GRPLNEEEIWAVCLQCLRALRELHRQA------KSGNILLT-----------------WDGLLKL--   52 (176)
T ss_pred             CcHHHHHHHh---CCCCCHHHHHHHHHHHHHHHHHHHhcC------CcccEeEc-----------------Cccceee--
Confidence            6899999865   467999999999999999999999999      99999998                 6677888  


Q ss_pred             cCCccccccCCCCccccccccCCCcccceeccCCCCCccchHhHHHHHHHHHHhCccccccccCCCCC------cee-e-
Q 018699          211 WGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQEKKPWKFQVDTYGLCAIVHMMLHNSYMEIEKKASPDG------GLV-Y-  282 (351)
Q Consensus       211 fg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~p~~~~~~~~~~------~~~-~-  282 (351)
                      ||.+.....       ....|++.|+|||++.+..++.++||||+||++|+|++|..||.........      ... . 
T Consensus        53 fG~~~~~~~-------~~~~g~~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~  125 (176)
T smart00750       53 DGSVAFKTP-------EQSRVDPYFMAPEVIQGQSYTEKADIYSLGITLYEALDYELPYNEERELSAILEILLNGMPADD  125 (176)
T ss_pred             ccceEeecc-------ccCCCcccccChHHhcCCCCcchhhHHHHHHHHHHHHhCCCCccccchhcHHHHHHHHHhccCC
Confidence            998764321       1125789999999999999999999999999999999999998654332100      000 0 


Q ss_pred             ecCcchhhhhHH-HHHHHHHHHHhcCCCCCChHHHHHHHHHHHHH
Q 018699          283 LPKLSFKRYWKV-ELWKSLFTNLLNMSSGNDKEVLQNLQKSFQDY  326 (351)
Q Consensus       283 ~~~~~~~~~~~~-~~~~~li~~~L~~dP~~R~s~~e~l~~~~~~~  326 (351)
                      ......+..+.. ..+.++|.+||+.||.+||++.+++.|++...
T Consensus       126 ~~~~~~~~~~~~~~~~~~~i~~cl~~~p~~Rp~~~~ll~~~~~~~  170 (176)
T smart00750      126 PRDRSNLESVSAARSFADFMRVCASRLPQRREAANHYLAHCRALF  170 (176)
T ss_pred             ccccccHHHHHhhhhHHHHHHHHHhcccccccCHHHHHHHHHHHH
Confidence            000112222331 16999999999999999999999999997654

It is an interaction domain identified as being similar to the C-terminal protein kinase catalytic fold (C lobe). Its presence at the N terminus of signalling proteins and the absence of the active-site residues in the catalytic and activation loops suggest that it folds independently and is likely to be non-catalytic. The occurrence of KIND only in metazoa implies that it has evolved from the catalytic protein kinase domain into an interaction domain possibly by keeping the substrate-binding features

>PLN00181 protein SPA1-RELATED; Provisional

Probab=99.95  E-value=2.6e-28  Score=245.86  Aligned_cols=200  Identities=14%  Similarity=0.148  Sum_probs=143.0

Q ss_pred             CeeEEEEEecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeeccCCC
Q 018699          119 DYSILVCDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRS  198 (351)
Q Consensus       119 ~~~~lv~e~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~~~  198 (351)
                      ..++.++|++ +++|.+++...   ...+++..++.++.||+.||.|||++||+||||||+|||++..+ ...+.|+..-
T Consensus        53 ~~~~~~~e~~-~~~L~~~l~~~---~~~~~~~~~~~i~~qi~~al~~lH~~gIvHrDlKP~NiLl~~~~-~~k~~d~~~~  127 (793)
T PLN00181         53 DSIVRALECE-DVSLRQWLDNP---DRSVDAFECFHVFRQIVEIVNAAHSQGIVVHNVRPSCFVMSSFN-HVSFIESASC  127 (793)
T ss_pred             chhhhhhccC-CccHHHHHhcc---cccccHHHHHHHHHHHHHHHHHHHhCCeeeccCCchhEEEcccC-cEEEeecccc
Confidence            3467788988 77999999753   35699999999999999999999999999999999999997432 3444444211


Q ss_pred             ---CCcccCCeEEeecCCccccccCCC--------------CccccccccCCCcccceeccCCCCCccchHhHHHHHHHH
Q 018699          199 ---GPWQDQGLCLVDWGRGIDLHLFPD--------------NMEFEGDCRTSGFRCIEMQEKKPWKFQVDTYGLCAIVHM  261 (351)
Q Consensus       199 ---~~~~~~~~~l~Dfg~a~~~~~~~~--------------~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~  261 (351)
                         ....++.+|++|||+++.......              ........||+.|+|||++.+..++.++|||||||++||
T Consensus       128 ~~~~~~~~~~~ki~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~sDVwSlGviL~E  207 (793)
T PLN00181        128 SDSGSDEDATTKSREIGSSRREEILSERRIEKLEEVKKQPFPMKQILAMEMSWYTSPEEDNGSSSNCASDVYRLGVLLFE  207 (793)
T ss_pred             CcccccccCcccccccccccccccccccchhhhhccccCCCcccccccCCCcceEChhhhccCCCCchhhhhhHHHHHHH
Confidence               112456789999998864221100              000112457889999999999999999999999999999


Q ss_pred             HHhCccccccccCCCCCceeeecCcchhhhhHHHHHHHHHHHHhcCCCCCChHHHHHHHHHHHH
Q 018699          262 MLHNSYMEIEKKASPDGGLVYLPKLSFKRYWKVELWKSLFTNLLNMSSGNDKEVLQNLQKSFQD  325 (351)
Q Consensus       262 l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~~~~~~  325 (351)
                      |++|.+|+...............+......+  ....+++.+||.+||.+||++.|+++|||..
T Consensus       208 Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~L~~~P~~Rps~~eil~h~~~~  269 (793)
T PLN00181        208 LFCPVSSREEKSRTMSSLRHRVLPPQILLNW--PKEASFCLWLLHPEPSCRPSMSELLQSEFIN  269 (793)
T ss_pred             HhhCCCchhhHHHHHHHHHHhhcChhhhhcC--HHHHHHHHHhCCCChhhCcChHHHhhchhhh
Confidence            9999888753321100000000011111111  4567899999999999999999999999853

>KOG1165 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]

Probab=99.95  E-value=1.7e-26  Score=197.31  Aligned_cols=216  Identities=20%  Similarity=0.209  Sum_probs=173.5

Q ss_pred             eEEEEcCeeEEEEEEeeccCceEEEEEEecCCCCceEEEEecCCCCChHHHHHHHHHhh-hccccccccccceeeecccC
Q 018699           41 KTIEIGGKKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFPWEFYMYRQLDQR-ISGRERSSFGFAHRIHLYSD  119 (351)
Q Consensus        41 ~~~~i~~~~Y~i~~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~~~e~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~  119 (351)
                      ..+.+.|-.|++.++||.|+||+++.|. +--++++||||......  +...++...+. -.....+.++.+.-+...+.
T Consensus        21 s~~~~VG~hyrVGkKIGeGsFG~lf~G~-Nl~nne~VAIKfEPrkS--~APQLrdEYr~YKlL~g~~GIP~vYYFGqeG~   97 (449)
T KOG1165|consen   21 SGVLMVGPHYRVGKKIGEGSFGVLFLGK-NLYNNEPVAIKFEPRKS--EAPQLRDEYRTYKLLGGTEGIPQVYYFGQEGK   97 (449)
T ss_pred             CCceEecccceeccccccCcceeeeccc-ccccCceEEEEeccccC--CcchHHHHHHHHHHHcCCCCCCceeeeccccc
Confidence            4556778999999999999999999999 68889999999865432  22222222211 11223456666666667777


Q ss_pred             eeEEEEEecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeeccCCCC
Q 018699          120 YSILVCDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSG  199 (351)
Q Consensus       120 ~~~lv~e~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~~~~  199 (351)
                      +-.+|+|++ |.+|++++.-+   ++.|+.+++..++.|++.-+.++|++.+|+|||||+|+||......          
T Consensus        98 ~NiLVidLL-GPSLEDLFD~C---gR~FSvKTV~miA~Qmi~rie~vH~k~LIYRDIKPdNFLIGrp~~k----------  163 (449)
T KOG1165|consen   98 YNILVIDLL-GPSLEDLFDLC---GRRFSVKTVAMIAKQMITRIEYVHEKDLIYRDIKPDNFLIGRPGTK----------  163 (449)
T ss_pred             hhhhhhhhh-CcCHHHHHHHh---cCcccHHhHHHHHHHHHHHHHHHHhcceeecccCccceeecCCCCC----------
Confidence            889999999 99999999988   7899999999999999999999999999999999999999976654          


Q ss_pred             CcccCCeEEeecCCccccccC-----CCCccccccccCCCcccceeccCCCCCccchHhHHHHHHHHHHhCccccccccC
Q 018699          200 PWQDQGLCLVDWGRGIDLHLF-----PDNMEFEGDCRTSGFRCIEMQEKKPWKFQVDTYGLCAIVHMMLHNSYMEIEKKA  274 (351)
Q Consensus       200 ~~~~~~~~l~Dfg~a~~~~~~-----~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~p~~~~~~  274 (351)
                        ....+.++|||+|......     .+-.+.....||..||+-.-..|..-+.+.|+-|||-++++++-|..||.....
T Consensus       164 --~~n~IhiiDFGmAK~YrDp~TkqHIPYrE~KSLsGTARYMSINTHlGrEQSRRDDLEaLGHvFmYFLRGsLPWQGLKA  241 (449)
T KOG1165|consen  164 --DANVIHIIDFGMAKEYRDPKTKQHIPYREHKSLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKA  241 (449)
T ss_pred             --CCceEEEEeccchhhhcCccccccCccccccccccceeeeEeeccccchhhhhhhHHHhhhhhhhhccCCCccccccC
Confidence              4566899999999753211     122334566899999999999998889999999999999999999999986554


Q ss_pred             C
Q 018699          275 S  275 (351)
Q Consensus       275 ~  275 (351)
                      .
T Consensus       242 ~  242 (449)
T KOG1165|consen  242 D  242 (449)
T ss_pred             c
Confidence            3

>smart00221 STYKc Protein kinase; unclassified specificity

Probab=99.95  E-value=1.8e-26  Score=197.83  Aligned_cols=199  Identities=23%  Similarity=0.251  Sum_probs=158.5

Q ss_pred             EEEEEEeeccCceEEEEEEecCCCCceEEEEecCCCCCh-HHHHHHHHHhhhccccccccccceeeecccCeeEEEEEec
Q 018699           50 YQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFPW-EFYMYRQLDQRISGRERSSFGFAHRIHLYSDYSILVCDYL  128 (351)
Q Consensus        50 Y~i~~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~~~-e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~  128 (351)
                      |.+.+.||.|++|+||+|. ...+++.+++|.+...... ....+...........++++.............++++|++
T Consensus         1 ~~~~~~i~~g~~~~v~~~~-~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e~~   79 (225)
T smart00221        1 YELGKKLGEGAFGKVYLAR-DKGTGELVAVKVLKKEKTEKQREEFLREIRILKKLKHPNIVKLYGVFEDPEPLYLVMEYC   79 (225)
T ss_pred             CceeeEeecCCCeEEEEEE-EcCCCcEEEEEeeccccchHHHHHHHHHHHHHHhCCCCChhhheeeeecCCceEEEEecc
Confidence            5788999999999999999 4566889999998876443 2222222222333445667777777777778899999999


Q ss_pred             CCCCHHHHHHHHHhhCCC-hhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeeccCCCCCcccCCeE
Q 018699          129 SQGTLQDAINSYVVIGKS-MEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSGPWQDQGLC  207 (351)
Q Consensus       129 ~~~sL~~~l~~~~~~~~~-l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~~~~~~~~~~~~  207 (351)
                      ++++|.+++...    .. +++..+..++.+++.++.+||+.+++|+|++|.||+++                 .++.++
T Consensus        80 ~~~~L~~~~~~~----~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~di~~~ni~v~-----------------~~~~~~  138 (225)
T smart00221       80 EGGDLFDYLRKK----GGKLSEEEARFYLRQILEALEYLHSLGIVHRDLKPENILLG-----------------MDGLVK  138 (225)
T ss_pred             CCCCHHHHHHhc----ccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEc-----------------CCCCEE
Confidence            988999999874    33 88999999999999999999999999999999999999                 667899


Q ss_pred             EeecCCccccccCCCCccccccccCCCcccceec-cCCCCCccchHhHHHHHHHHHHhCcccccc
Q 018699          208 LVDWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQ-EKKPWKFQVDTYGLCAIVHMMLHNSYMEIE  271 (351)
Q Consensus       208 l~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~-~~~~~~~~~DiwslG~il~~l~~g~~p~~~  271 (351)
                      |+|||.+........ .......++..|++||.+ ....++.++|+|+||+++++|++|..||..
T Consensus       139 l~d~g~~~~~~~~~~-~~~~~~~~~~~~~~pe~~~~~~~~~~~~Dv~~lG~~~~~l~~g~~pf~~  202 (225)
T smart00221      139 LADFGLARFIHRDLA-ALLKTVKGTPFYLAPEVLLGGKGYGEAVDIWSLGVILYELLWGPEPFSG  202 (225)
T ss_pred             EeeCceeeEecCccc-ccccceeccCCcCCHhHhcCCCCCCchhhHHHHHHHHHHHHHCCCCccc
Confidence            999998865332110 123344677889999998 666778899999999999999999999965

Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase.

>KOG1024 consensus Receptor-like protein tyrosine kinase RYK/derailed [Signal transduction mechanisms]

Probab=99.94  E-value=5.4e-27  Score=204.09  Aligned_cols=262  Identities=12%  Similarity=0.150  Sum_probs=190.7

Q ss_pred             cceEEEEcCeeEEEEEEeeccCceEEEEEEecC----CCCceEEEEecCCCCC-hHHHHHHHHHhhhcccccccccccee
Q 018699           39 RNKTIEIGGKKYQIKGCAGQGGFAKVFKAYVNG----DPEDVVALKIQKPAFP-WEFYMYRQLDQRISGRERSSFGFAHR  113 (351)
Q Consensus        39 ~~~~~~i~~~~Y~i~~~lg~G~~g~V~~a~~~~----~~~~~vaiK~~~~~~~-~e~~~~~~~~~~~~~~~~~~~~~~~~  113 (351)
                      +.+.+++...|+++...+..|+||.||.|.|..    .+.+.|.+|.++.... -....+.+..-.+....|+++..+..
T Consensus       275 r~~~l~v~r~Rv~l~~llqEGtFGri~~gI~~eEdt~n~~q~v~vKTvk~~AS~iQv~~~L~es~lly~~sH~nll~V~~  354 (563)
T KOG1024|consen  275 RLQELTVQRCRVRLSCLLQEGTFGRIYRGIWREEDTYNDCQEVLVKTVKQHASQIQVNLLLQESMLLYGASHPNLLSVLG  354 (563)
T ss_pred             hHHhhhhhhhheechhhhhcCchhheeeeeecccCCcchHHHHHHHHHHhcccHHHHHHHHHHHHHHhcCcCCCccceeE
Confidence            344567777899999999999999999998732    2345667777654322 12333333333455566778777666


Q ss_pred             eec-ccCeeEEEEEecCCCCHHHHHHHHHh----hCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCC
Q 018699          114 IHL-YSDYSILVCDYLSQGTLQDAINSYVV----IGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARD  188 (351)
Q Consensus       114 ~~~-~~~~~~lv~e~~~~~sL~~~l~~~~~----~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~  188 (351)
                      +.. .....++++.+..-|+|..++..++-    ....++..+...++.|++.|++|||.+||+|.||...|.+++    
T Consensus       355 V~ie~~~~P~V~y~~~~~gNLK~FL~~Cr~~~~~~aqtvtt~qlV~masQla~am~hlh~~~ViHkDiAaRNCvId----  430 (563)
T KOG1024|consen  355 VSIEDYATPFVLYPATGVGNLKSFLQICRGDDPSYAQTVTTIQLVLMASQLAMAMEHLHNHGVIHKDIAARNCVID----  430 (563)
T ss_pred             EEeeccCcceEEEeccCcchHHHHHHHhccCCCccccchhHHHHHHHHHHHHHHHHHHHhcCcccchhhhhcceeh----
Confidence            654 45677889999988999999985431    023577888899999999999999999999999999999999    


Q ss_pred             cceeeccCCCCCcccCCeEEeecCCccccccCCCCccc-cc-cccCCCcccceeccCCCCCccchHhHHHHHHHHHHh-C
Q 018699          189 ELTVLDHDRSGPWQDQGLCLVDWGRGIDLHLFPDNMEF-EG-DCRTSGFRCIEMQEKKPWKFQVDTYGLCAIVHMMLH-N  265 (351)
Q Consensus       189 ~~~~~~~~~~~~~~~~~~~l~Dfg~a~~~~~~~~~~~~-~~-~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~-g  265 (351)
                                   ....+||+|=.+++.  .++.+..- .+ ......||+||.+....|+.++|+||||+++|||+| |
T Consensus       431 -------------d~LqVkltDsaLSRD--LFP~DYhcLGDnEnRPvkWMslEal~n~~yssasDvWsfGVllWELmtlg  495 (563)
T KOG1024|consen  431 -------------DQLQVKLTDSALSRD--LFPGDYHCLGDNENRPVKWMSLEALQNSHYSSASDVWSFGVLLWELMTLG  495 (563)
T ss_pred             -------------hheeEEeccchhccc--cCcccccccCCCCCCcccccCHHHHhhhhhcchhhhHHHHHHHHHHHhcC
Confidence                         677899999888864  34433221 11 123567999999999999999999999999999995 6


Q ss_pred             ccccccccCCCCCceeee-cCcchhhhhHHHHHHHHHHHHhcCCCCCChHHHHHHH
Q 018699          266 SYMEIEKKASPDGGLVYL-PKLSFKRYWKVELWKSLFTNLLNMSSGNDKEVLQNLQ  320 (351)
Q Consensus       266 ~~p~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~  320 (351)
                      +.|+..-++.+...+... -+...|-.++ +++-.+|..||..+|++||++.|+..
T Consensus       496 ~~PyaeIDPfEm~~ylkdGyRlaQP~NCP-DeLf~vMacCWallpeeRPsf~Qlv~  550 (563)
T KOG1024|consen  496 KLPYAEIDPFEMEHYLKDGYRLAQPFNCP-DELFTVMACCWALLPEERPSFSQLVI  550 (563)
T ss_pred             CCCccccCHHHHHHHHhccceecCCCCCc-HHHHHHHHHHHhcCcccCCCHHHHHH
Confidence            677765444322222211 1112222333 88999999999999999999999864

>KOG1163 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]

Probab=99.93  E-value=1e-25  Score=184.59  Aligned_cols=207  Identities=23%  Similarity=0.268  Sum_probs=165.6

Q ss_pred             EEcCeeEEEEEEeeccCceEEEEEEecCCCCceEEEEecCCCCCh-----HHHHHHHHHhhhccccccccccceeeeccc
Q 018699           44 EIGGKKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFPW-----EFYMYRQLDQRISGRERSSFGFAHRIHLYS  118 (351)
Q Consensus        44 ~i~~~~Y~i~~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~~~-----e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  118 (351)
                      .|.+++|.++++||+|+||.+|+|. ....|+.||||+.......     |..+.+.+..      -..++.+..+...+
T Consensus        11 ~iv~gky~lvrkiGsGSFGdIy~~~-~i~~ge~VAiK~Es~~a~hpqL~yEskvY~iL~~------g~GiP~i~~y~~e~   83 (341)
T KOG1163|consen   11 LIVGGKYKLVRKIGSGSFGDIYLGI-SITSGEEVAIKLESSKAKHPQLLYESKVYRILQG------GVGIPHIRHYGTEK   83 (341)
T ss_pred             heeccceEEEEeecCCchhheeeee-eccCCceEEEEeecccCCCcchhHHHHHHHHhcc------CCCCchhhhhcccc
Confidence            3567899999999999999999999 6888999999997754332     3333333222      22455555666777


Q ss_pred             CeeEEEEEecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeeccCCC
Q 018699          119 DYSILVCDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRS  198 (351)
Q Consensus       119 ~~~~lv~e~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~~~  198 (351)
                      .+-.+|||++ |.+|+++++-+   .+.++..+++.++-|++.-+.|+|.++++||||||+|+++.-+.           
T Consensus        84 ~ynvlVMdLL-GPsLEdLfnfC---~R~ftmkTvLMLaDQml~RiEyvH~r~fiHRDIKPdNFLMGlgr-----------  148 (341)
T KOG1163|consen   84 DYNVLVMDLL-GPSLEDLFNFC---SRRFTMKTVLMLADQMLSRIEYVHLRNFIHRDIKPDNFLMGLGR-----------  148 (341)
T ss_pred             ccceeeeecc-CccHHHHHHHH---hhhhhHHhHHHHHHHHHHHHHHHHhhccccccCCccceeecccc-----------
Confidence            8889999999 99999999987   57899999999999999999999999999999999999999554           


Q ss_pred             CCcccCCeEEeecCCccccccCCC-----CccccccccCCCcccceeccCCCCCccchHhHHHHHHHHHHhCcccccccc
Q 018699          199 GPWQDQGLCLVDWGRGIDLHLFPD-----NMEFEGDCRTSGFRCIEMQEKKPWKFQVDTYGLCAIVHMMLHNSYMEIEKK  273 (351)
Q Consensus       199 ~~~~~~~~~l~Dfg~a~~~~~~~~-----~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~p~~~~~  273 (351)
                         ....+.++|||+|........     -.+-....||..|.+-....+...+.+.|+-|+|.++.++--|..||..-.
T Consensus       149 ---h~~kl~LIDFGLaKky~d~~t~~HIpyre~r~ltGTaRYASinAh~g~eqSRRDDmeSvgYvLmYfnrG~LPWQglk  225 (341)
T KOG1163|consen  149 ---HCNKLYLIDFGLAKKYRDIRTRQHIPYREDRNLTGTARYASINAHLGIEQSRRDDMESVGYVLMYFNRGSLPWQGLK  225 (341)
T ss_pred             ---ccceEEEEeccchhhhccccccccCccccCCccceeeeehhhhhhhhhhhhhhhhhhhhcceeeeeecCCCcccccc
Confidence               345688999999975432221     222344568999999887777777889999999999999999999998755


Q ss_pred             CC
Q 018699          274 AS  275 (351)
Q Consensus       274 ~~  275 (351)
                      ..
T Consensus       226 a~  227 (341)
T KOG1163|consen  226 AA  227 (341)
T ss_pred             hh
Confidence            43

>KOG1164 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]

Probab=99.93  E-value=1.6e-24  Score=196.21  Aligned_cols=254  Identities=17%  Similarity=0.198  Sum_probs=178.1

Q ss_pred             eEEEEEEeeccCceEEEEEEecCCCCceEEEEecCCCC-------ChHHHHHHHHHhhhccccccccccceeee-cccCe
Q 018699           49 KYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAF-------PWEFYMYRQLDQRISGRERSSFGFAHRIH-LYSDY  120 (351)
Q Consensus        49 ~Y~i~~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~-------~~e~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~  120 (351)
                      +|.+.+.||+|+||.||.|.+.......+|+|+.....       ..|..++..+..   ......+..+.... ..+.+
T Consensus        19 ~~~i~~~iG~G~fG~V~~v~~~~~~~~~~a~K~e~~~~~~~~~~l~~E~~vl~~l~~---~~~~~~~~~~~~~G~~~~~~   95 (322)
T KOG1164|consen   19 RYKLGKKIGEGGFGAVYLVSDKSEKNKEYAKKLEKKELGSKPSVLKIEIQVLKKLEK---KNGPSHFPKLLDHGRSTEDF   95 (322)
T ss_pred             ceEEeeeccccCCceEEEEEecCCCCeeEEEEEEEecccCCCccchhHHHHHHHHhh---hcCCCCCCEEEEeccCCCce
Confidence            89999999999999999999533334689999866432       224444444433   12223455555555 46678


Q ss_pred             eEEEEEecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeeccCCCCC
Q 018699          121 SILVCDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSGP  200 (351)
Q Consensus       121 ~~lv~e~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~~~~~  200 (351)
                      .|+||+.+ |.+|.++.....  ++.++..++..++.|++.+|.++|+.|++||||||+|+.+......           
T Consensus        96 ~~iVM~l~-G~sL~dl~~~~~--~~~fs~~T~l~ia~q~l~~l~~lH~~G~iHRDiKp~N~~~g~~~~~-----------  161 (322)
T KOG1164|consen   96 NFIVMSLL-GPSLEDLRKRNP--PGRFSRKTVLRIAIQNLNALEDLHSKGFIHRDIKPENFVVGQSSRS-----------  161 (322)
T ss_pred             eEEEEecc-CccHHHHHHhCC--CCCcCHhHHHHHHHHHHHHHHHHHhcCcccCCcCHHHeeecCCCCc-----------
Confidence            89999999 999999887653  4789999999999999999999999999999999999999954310           


Q ss_pred             cccCCeEEeecCCcccccc--CCCC------ccccccccCCCcccceeccCCCCCccchHhHHHHHHHHHHhCccccccc
Q 018699          201 WQDQGLCLVDWGRGIDLHL--FPDN------MEFEGDCRTSGFRCIEMQEKKPWKFQVDTYGLCAIVHMMLHNSYMEIEK  272 (351)
Q Consensus       201 ~~~~~~~l~Dfg~a~~~~~--~~~~------~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~p~~~~  272 (351)
                       ....+.|.|||+++....  ..+.      .......||..|.++..+.+...+.+.|+||++.++.+++.|..||...
T Consensus       162 -~~~~~~llDfGlar~~~~~~~~~~~~~~~r~~~~~~rGT~ry~S~~~H~~~e~~r~DDles~~Y~l~el~~g~LPW~~~  240 (322)
T KOG1164|consen  162 -EVRTLYLLDFGLARRFKYVGDSGGNLRPPRPQKGLFRGTLRYASINVHLGIEQGRRDDLESLFYMLLELLKGSLPWEAL  240 (322)
T ss_pred             -ccceEEEEecCCCccccccCCCCcccccCCCCccCCCCccccccHHHhCCCccCCchhhhhHHHHHHHHhcCCCCCccc
Confidence             224689999999983221  1111      1123456999999999999999999999999999999999999998654


Q ss_pred             cCCCC-CceeeecCcc----hhhhhHHHHHHHHHHHHhcCCCCCChHHHHHHHH
Q 018699          273 KASPD-GGLVYLPKLS----FKRYWKVELWKSLFTNLLNMSSGNDKEVLQNLQK  321 (351)
Q Consensus       273 ~~~~~-~~~~~~~~~~----~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~~  321 (351)
                      ..... ..+.......    ...... ..+..+...+-..+...+|....+...
T Consensus       241 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~Pdy~~~~~~  293 (322)
T KOG1164|consen  241 EMTDLKSKFEKDPRKLLTDRFGDLKP-EEFAKILEYIDSLDYEDKPDYEKLAEL  293 (322)
T ss_pred             cccchHHHHHHHhhhhccccccCCCh-HHHHHHHHHhhccCCcCCCCHHHHHHH
Confidence            43211 0000000000    001111 455666666666777887776665543

>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]

Probab=99.92  E-value=9.9e-26  Score=216.76  Aligned_cols=251  Identities=15%  Similarity=0.117  Sum_probs=179.1

Q ss_pred             EEEEEeeccCceEEEEEEecCCCCceEEEEecCC---CCChHHHHHHHHHhhhcc---ccccccccceeeecccCeeEEE
Q 018699           51 QIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKP---AFPWEFYMYRQLDQRISG---RERSSFGFAHRIHLYSDYSILV  124 (351)
Q Consensus        51 ~i~~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~---~~~~e~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~lv  124 (351)
                      .....+|.|++|.|+.+. .....+.++.|.+..   ....+......+..+...   ..++++.....+........-+
T Consensus       321 ~~~~~~g~ga~g~~~~~~-~~~~~~~~~~~~~r~~~~~~~s~~~~~~~i~sE~~i~~~l~h~~~~e~l~~~~~~~~~~~~  399 (601)
T KOG0590|consen  321 KPGRVLGSGAYGSVRIAK-RRSDLKSFPEKEFRVRVKPTESERKYNYNITSEFCIGSSLSHPNIIETLDIVQEIDGILQS  399 (601)
T ss_pred             CccceeeecccCceEEEE-ecCCCccchhhhhhcccCCcccHHHHhhhhhhheeecccccCCchhhhHHHHhhcccchhh
Confidence            567889999999888887 455555556665441   112222111113333222   2333332222333333333445


Q ss_pred             EEecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeeccCCCCCcccC
Q 018699          125 CDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSGPWQDQ  204 (351)
Q Consensus       125 ~e~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~~~~~~~~~  204 (351)
                      ||||++ +|..++..    +..++...+..+++|++.|++|+|+.||.|||+||+|+++.                 .++
T Consensus       400 mE~~~~-Dlf~~~~~----~~~~~~~e~~c~fKqL~~Gv~y~h~~GiahrdlK~enll~~-----------------~~g  457 (601)
T KOG0590|consen  400 MEYCPY-DLFSLVMS----NGKLTPLEADCFFKQLLRGVKYLHSMGLAHRDLKLENLLVT-----------------ENG  457 (601)
T ss_pred             hhcccH-HHHHHHhc----ccccchhhhhHHHHHHHHHHHHHHhcCceeccCccccEEEe-----------------cCC
Confidence            999998 99999887    45788999999999999999999999999999999999999                 888


Q ss_pred             CeEEeecCCccccccCCCC--ccccccccCCCcccceeccCCCCC-ccchHhHHHHHHHHHHhCccccccccCCCCC---
Q 018699          205 GLCLVDWGRGIDLHLFPDN--MEFEGDCRTSGFRCIEMQEKKPWK-FQVDTYGLCAIVHMMLHNSYMEIEKKASPDG---  278 (351)
Q Consensus       205 ~~~l~Dfg~a~~~~~~~~~--~~~~~~~g~~~y~aPE~~~~~~~~-~~~DiwslG~il~~l~~g~~p~~~~~~~~~~---  278 (351)
                      .+||+|||.+.......+.  ......+|+..|+|||.+.+..|. ...||||.|+++++|.+|+.||.........   
T Consensus       458 ~lki~Dfg~~~vf~~~~e~~~~~~~g~~gS~pY~apE~~~~~~ydpr~vDiwS~~ii~~~m~~~~~~Wk~a~~~~~~~~~  537 (601)
T KOG0590|consen  458 ILKIIDFGAASVFRYPWEKNIHESSGIVGSDPYLAPEVLTGKEYDPRAVDVWSCGIIYICMILGRFPWKVAKKSDNSFKT  537 (601)
T ss_pred             ceEEeecCcceeeccCcchhhhhhcCcccCCcCcCcccccccccCcchhhhhhccceEEEEecCCCccccccccccchhh
Confidence            9999999988665443343  445667899999999999999997 7789999999999999999999765544221   


Q ss_pred             ------ceeeecCcchhhhhHHHHHHHHHHHHhcCCCCCChHHHHHHHHHHHH
Q 018699          279 ------GLVYLPKLSFKRYWKVELWKSLFTNLLNMSSGNDKEVLQNLQKSFQD  325 (351)
Q Consensus       279 ------~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~~~~~~  325 (351)
                            .........+-.... ...+.+|.+||++||.+|+++.++++.+|..
T Consensus       538 ~~~~~~~~~~~~~~~~~~~lp-~~~~~~~~~~l~~~P~~R~ti~~i~~d~W~~  589 (601)
T KOG0590|consen  538 NNYSDQRNIFEGPNRLLSLLP-RETRIIIYRMLQLDPTKRITIEQILNDEWIR  589 (601)
T ss_pred             hccccccccccChHHHHHhch-hhHHHHHHHHccCChhheecHHHHhhChHhh
Confidence                  111111111111122 6788999999999999999999999976543

>PF14531 Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_A 3Q5Z_A 3Q60_A

Probab=99.92  E-value=9.8e-24  Score=183.23  Aligned_cols=236  Identities=19%  Similarity=0.260  Sum_probs=147.9

Q ss_pred             eeEEEEEEeeccCceEEEEEEecCCCCceEEEEecCCCCChHHHHHHHHHhhh-cccc------------ccccccceee
Q 018699           48 KKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFPWEFYMYRQLDQRI-SGRE------------RSSFGFAHRI  114 (351)
Q Consensus        48 ~~Y~i~~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~~~e~~~~~~~~~~~-~~~~------------~~~~~~~~~~  114 (351)
                      ..+...+.||.|+++.||.+. +..+|+.+|+|++...........+++.++. ....            +..+..+.++
T Consensus        12 r~l~~~~~i~~g~~~~v~~v~-d~~t~~~~avkvf~~~~~~~~~~~~~~~~e~l~~~~~~~~~~p~~a~~~~r~l~P~d~   90 (288)
T PF14531_consen   12 RTLVRGRIIGKGGFSIVFEVT-DVETGEEFAVKVFLLPADASANEYEQLKEEQLAITLFPGVKNPKEAYRHLRFLVPLDL   90 (288)
T ss_dssp             EEEEEEEEEEEETTEEEEEEE-ETTTTEEEEEEEEEESSTTHTTHHHHHHHHHHGGGGSTT--SHHHHHHHH-B---SEE
T ss_pred             eEEEEccccccCCceEEEEEE-EccCCceEEEEEEecccccchHHHHHHHHHHHHhhhhccCCCHHHHHHhceEEeeeEE
Confidence            356789999999999999999 6889999999986533222222222222211 1110            1111222222


Q ss_pred             ecc---------c---C-----eeEEEEEecCCCCHHHHHHHHHhhCC---ChhHHHHHHHHHHHHHHHHHHHHCCceec
Q 018699          115 HLY---------S---D-----YSILVCDYLSQGTLQDAINSYVVIGK---SMEEVLCIYYTIEMLCILESLHDVGIIHG  174 (351)
Q Consensus       115 ~~~---------~---~-----~~~lv~e~~~~~sL~~~l~~~~~~~~---~l~~~~~~~i~~qi~~~l~~LH~~~i~H~  174 (351)
                      ...         .   .     ..+++|+-+ .++|.+++........   .+.......+..|++..+++||..|++|+
T Consensus        91 ~~i~~~~~~~~~~~~~~~~~v~n~~~l~P~~-~~dL~~~~~~l~~~~~~~~~l~~~arl~lT~Q~I~lvA~Lh~~GlVHg  169 (288)
T PF14531_consen   91 LRIPGKPPFFERGPGQSIYWVLNRFLLMPRA-QGDLQDLVEALFSRAQTHSPLAFAARLSLTVQMIRLVANLHSYGLVHG  169 (288)
T ss_dssp             EEETTS-SEEEECETTEEEEEESEEEEEE---SEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHTTEEES
T ss_pred             EEEcCCCcceecCCCCccceeehhhhccchh-hhcHHHHHHHHhhcccccchhHHHHHHHHHHHHHHHHHHHhhcceEec
Confidence            111         1   1     226788877 6689888664322122   23344445666899999999999999999


Q ss_pred             CCCCCcEEEeecCCcceeeccCCCCCcccCCeEEeecCCccccccCCCCccccccccCCCcccceeccC--------CCC
Q 018699          175 DFKPDNLLIRYARDELTVLDHDRSGPWQDQGLCLVDWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQEK--------KPW  246 (351)
Q Consensus       175 dl~p~Nill~~~~~~~~~~~~~~~~~~~~~~~~l~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~--------~~~  246 (351)
                      ||+|+|++++                 .+|.+.|+||+......     ........+..|.+||....        ..+
T Consensus       170 di~~~nfll~-----------------~~G~v~Lg~F~~~~r~g-----~~~~~~~~~~~~~PPe~~~~~~~~~~~~~~~  227 (288)
T PF14531_consen  170 DIKPENFLLD-----------------QDGGVFLGDFSSLVRAG-----TRYRCSEFPVAFTPPELESCAGQFGQNNAPY  227 (288)
T ss_dssp             T-SGGGEEE------------------TTS-EEE--GGGEEETT-----EEEEGGGS-TTTS-HHHHHHHTSCHHSEEEE
T ss_pred             ccceeeEEEc-----------------CCCCEEEcChHHHeecC-----ceeeccCCCcccCChhhhhhhcccCccccee
Confidence            9999999999                 88999999999665422     22222334577999997633        246


Q ss_pred             CccchHhHHHHHHHHHHhCccccccccCCCCCceeeecCcchhhhhHHHHHHHHHHHHhcCCCCCC
Q 018699          247 KFQVDTYGLCAIVHMMLHNSYMEIEKKASPDGGLVYLPKLSFKRYWKVELWKSLFTNLLNMSSGND  312 (351)
Q Consensus       247 ~~~~DiwslG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R  312 (351)
                      +.+.|.|+||+++|.+++|..||............+.....+|     +.++.||.++|++||.+|
T Consensus       228 t~~~DaW~LG~~ly~lWC~~lPf~~~~~~~~~~~~f~~C~~~P-----e~v~~LI~~lL~~~~~~R  288 (288)
T PF14531_consen  228 TFATDAWQLGITLYSLWCGRLPFGLSSPEADPEWDFSRCRDMP-----EPVQFLIRGLLQRNPEDR  288 (288)
T ss_dssp             -HHHHHHHHHHHHHHHHHSS-STCCCGGGSTSGGGGTTSS--------HHHHHHHHHHT-SSGGGS
T ss_pred             eeccCHHHHHHHHHHHHHccCCCCCCCccccccccchhcCCcC-----HHHHHHHHHHccCCcccC
Confidence            7899999999999999999999987665533333333333445     789999999999999987

>PRK09188 serine/threonine protein kinase; Provisional

Probab=99.90  E-value=4.6e-23  Score=186.63  Aligned_cols=168  Identities=15%  Similarity=0.108  Sum_probs=115.2

Q ss_pred             EEEcCeeEEEEEEeeccCceEEEEEEecCCCCceEEEEecCCCCC----h-HHHHHHHHHhhhccccccccccceeeecc
Q 018699           43 IEIGGKKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFP----W-EFYMYRQLDQRISGRERSSFGFAHRIHLY  117 (351)
Q Consensus        43 ~~i~~~~Y~i~~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~~----~-e~~~~~~~~~~~~~~~~~~~~~~~~~~~~  117 (351)
                      .....++|++.+.||+|+||+||+|++...+++.||||+......    . ....+......+....+++++...  . .
T Consensus        13 ~~~~~~~Y~~~~~IG~G~fg~Vy~a~~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~E~~iL~~L~h~~iv~~l--~-~   89 (365)
T PRK09188         13 IPALSARFVETAVLKRDVFSTVERGYFAGDPGTARAVRRRVSEVPWWSKPLARHLAAREIRALKTVRGIGVVPQL--L-A   89 (365)
T ss_pred             cccccCCceEccEEeecCcEEEEEEEEcCCCCeEEEEEEecccccccccHHHHHHHHHHHHHHHhccCCCCCcEE--E-E
Confidence            345567899999999999999999996555788899998653311    1 111122222222333344443211  1 1


Q ss_pred             cCeeEEEEEecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCC-CCCcEEEeecCCcceeeccC
Q 018699          118 SDYSILVCDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDF-KPDNLLIRYARDELTVLDHD  196 (351)
Q Consensus       118 ~~~~~lv~e~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl-~p~Nill~~~~~~~~~~~~~  196 (351)
                      .+..|+||||++|++|... ..       ..   ...++.|++.+|.|||++||+|||| ||+||+++            
T Consensus        90 ~~~~~LVmE~~~G~~L~~~-~~-------~~---~~~~~~~i~~aL~~lH~~gIiHrDL~KP~NILv~------------  146 (365)
T PRK09188         90 TGKDGLVRGWTEGVPLHLA-RP-------HG---DPAWFRSAHRALRDLHRAGITHNDLAKPQNWLMG------------  146 (365)
T ss_pred             cCCcEEEEEccCCCCHHHh-Cc-------cc---hHHHHHHHHHHHHHHHHCCCeeCCCCCcceEEEc------------
Confidence            2457999999999999632 11       11   1356889999999999999999999 99999998            


Q ss_pred             CCCCcccCCeEEeecCCccccccCCCCcc------ccccccCCCcccceec
Q 018699          197 RSGPWQDQGLCLVDWGRGIDLHLFPDNME------FEGDCRTSGFRCIEMQ  241 (351)
Q Consensus       197 ~~~~~~~~~~~l~Dfg~a~~~~~~~~~~~------~~~~~g~~~y~aPE~~  241 (351)
                           .++.++|+|||+|...........      .....+++.|+|||.+
T Consensus       147 -----~~~~ikLiDFGlA~~~~~~~~~~~~~~~~d~~~~~~~~~~~~pe~~  192 (365)
T PRK09188        147 -----PDGEAAVIDFQLASVFRRRGALYRIAAYEDLRHLLKHKRTYAPDAL  192 (365)
T ss_pred             -----CCCCEEEEECccceecccCcchhhhhhhhhhhhhhccCccCCcccC
Confidence                 567799999999976543322111      2345678889999987

>COG0515 SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]

Probab=99.88  E-value=1.3e-21  Score=176.79  Aligned_cols=252  Identities=20%  Similarity=0.220  Sum_probs=180.7

Q ss_pred             EEEEEEeeccCceEEEEEEecCCCCceEEEEecCCCCChHH----HHHHHHHhhhcccccc-ccccceeeecccCeeEEE
Q 018699           50 YQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFPWEF----YMYRQLDQRISGRERS-SFGFAHRIHLYSDYSILV  124 (351)
Q Consensus        50 Y~i~~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~~~e~----~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~lv  124 (351)
                      |.+.+.||.|+|+.||.+.+.    ..+++|.+........    ...++.. ......++ ++.............+++
T Consensus         2 ~~~~~~l~~g~~~~v~~~~~~----~~~~~k~~~~~~~~~~~~~~~~~~e~~-~~~~~~~~~~i~~~~~~~~~~~~~~~~   76 (384)
T COG0515           2 YRILRKLGEGSFGEVYLARDR----KLVALKVLAKKLESKSKEVERFLREIQ-ILASLNHPPNIVKLYDFFQDEGSLYLV   76 (384)
T ss_pred             ceeEEeecCCCCeEEEEEEec----cEEEEEeechhhccchhHHHHHHHHHH-HHHHccCCcceeeEEEEEecCCEEEEE
Confidence            889999999999999999953    7789998876544321    2222222 22233333 455555555556667999


Q ss_pred             EEecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeeccCCCCCcccC
Q 018699          125 CDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSGPWQDQ  204 (351)
Q Consensus       125 ~e~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~~~~~~~~~  204 (351)
                      ++++.++++.+++...... ..++...+..++.|++.++.++|+.+++|||+||+||+++                 ..+
T Consensus        77 ~~~~~~~~l~~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~~~H~~~~~hrd~kp~nil~~-----------------~~~  138 (384)
T COG0515          77 MEYVDGGSLEDLLKKIGRK-GPLSESEALFILAQILSALEYLHSKGIIHRDIKPENILLD-----------------RDG  138 (384)
T ss_pred             EecCCCCcHHHHHHhcccc-cCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHeeec-----------------CCC
Confidence            9999999999776653100 2689999999999999999999999999999999999999                 455


Q ss_pred             -CeEEeecCCccccccCCCC----ccccccccCCCcccceeccC---CCCCccchHhHHHHHHHHHHhCccccccccCC-
Q 018699          205 -GLCLVDWGRGIDLHLFPDN----MEFEGDCRTSGFRCIEMQEK---KPWKFQVDTYGLCAIVHMMLHNSYMEIEKKAS-  275 (351)
Q Consensus       205 -~~~l~Dfg~a~~~~~~~~~----~~~~~~~g~~~y~aPE~~~~---~~~~~~~DiwslG~il~~l~~g~~p~~~~~~~-  275 (351)
                       .++++|||.+.........    .......|+..|++||.+.+   ..+....|+||+|++++++++|..||...... 
T Consensus       139 ~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~t~~~~~pe~~~~~~~~~~~~~~D~~s~g~~~~~~~~~~~p~~~~~~~~  218 (384)
T COG0515         139 RVVKLIDFGLAKLLPDPGSTSSIPALPSTSVGTPGYMAPEVLLGLSLAYASSSSDIWSLGITLYELLTGLPPFEGEKNSS  218 (384)
T ss_pred             CeEEEeccCcceecCCCCccccccccccccccccccCCHHHhcCCCCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCccc
Confidence             5899999988643322111    13466789999999999987   56789999999999999999999996655431 


Q ss_pred             ---CCCceeeecC-----cchhhh---hHHHHHHHHHHHHhcCCCCCChHHHHHHHHHHH
Q 018699          276 ---PDGGLVYLPK-----LSFKRY---WKVELWKSLFTNLLNMSSGNDKEVLQNLQKSFQ  324 (351)
Q Consensus       276 ---~~~~~~~~~~-----~~~~~~---~~~~~~~~li~~~L~~dP~~R~s~~e~l~~~~~  324 (351)
                         ..........     ......   .....+.+++.+++..+|..|.+..+...+.+.
T Consensus       219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~  278 (384)
T COG0515         219 ATSQTLKIILELPTPSLASPLSPSNPELISKAASDLLKKLLAKDPKNRLSSSSDLSHDLL  278 (384)
T ss_pred             cHHHHHHHHHhcCCcccccccCccccchhhHHHHHHHHHHHhcCchhcCCHHHHhhchHh
Confidence               0000000000     001100   001468899999999999999999988877543

>KOG1240 consensus Protein kinase containing WD40 repeats [Signal transduction mechanisms]

Probab=99.88  E-value=2.4e-23  Score=201.63  Aligned_cols=244  Identities=15%  Similarity=0.141  Sum_probs=173.3

Q ss_pred             eEEEEEEeeccCceEEEEEEecCCCCceEEEEecCCCCCh-----HHHHHHHHHhhhccccccccccceeeecccCeeEE
Q 018699           49 KYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFPW-----EFYMYRQLDQRISGRERSSFGFAHRIHLYSDYSIL  123 (351)
Q Consensus        49 ~Y~i~~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~~~-----e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  123 (351)
                      .|...+.||++.|=.|.+|++  ..| .|+||++.+....     -.+.+.++.  +....+++...+..+.......|+
T Consensus        24 e~~~~~~LGstRFlKv~r~k~--~eG-~vVvKVFvk~~p~~sL~~~~qrL~~ik--~~l~~~pn~lPfqk~~~t~kAAyl   98 (1431)
T KOG1240|consen   24 ECHYVENLGSTRFLKVARAKD--REG-LVVVKVFVKQDPTISLRPFKQRLEEIK--FALMKAPNCLPFQKVLVTDKAAYL   98 (1431)
T ss_pred             ceeeecccCchhhhhhhhccC--CCc-eEEEEEEeccCCCCCchHHHHHHHHHH--HHhhcCCcccchHHHHHhhHHHHH
Confidence            688899999999999999994  233 3999998654321     122233333  344455555555555556677789


Q ss_pred             EEEecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeeccCCCCCccc
Q 018699          124 VCDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSGPWQD  203 (351)
Q Consensus       124 v~e~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~~~~~~~~  203 (351)
                      |-+|. .-+|+|.+..+    +.+..-+.+.|+.|++.|+..+|..||+|||||.+||++.                 +.
T Consensus        99 vRqyv-khnLyDRlSTR----PFL~~iEKkWiaFQLL~al~qcH~~gVcHGDIKsENILiT-----------------SW  156 (1431)
T KOG1240|consen   99 VRQYV-KHNLYDRLSTR----PFLVLIEKKWIAFQLLKALSQCHKLGVCHGDIKSENILIT-----------------SW  156 (1431)
T ss_pred             HHHHH-hhhhhhhhccc----hHHHHHHHHHHHHHHHHHHHHHHHcCccccccccceEEEe-----------------ee
Confidence            99999 55999999884    6678888899999999999999999999999999999999                 77


Q ss_pred             CCeEEeecCCccccccCCCCcc------ccccccCCCcccceeccCC----------C-CCccchHhHHHHHHHHHHhC-
Q 018699          204 QGLCLVDWGRGIDLHLFPDNME------FEGDCRTSGFRCIEMQEKK----------P-WKFQVDTYGLCAIVHMMLHN-  265 (351)
Q Consensus       204 ~~~~l~Dfg~a~~~~~~~~~~~------~~~~~g~~~y~aPE~~~~~----------~-~~~~~DiwslG~il~~l~~g-  265 (351)
                      .-+.|+||..-...- .+++++      +.+...-.+|+|||.+...          + .+++.||||+||+++||++- 
T Consensus       157 NW~~LtDFAsFKPtY-LPeDNPadf~fFFDTSrRRtCYiAPERFv~~~~~~~~~q~~~~L~paMDIFS~GCViaELf~Eg  235 (1431)
T KOG1240|consen  157 NWLYLTDFASFKPTY-LPEDNPADFTFFFDTSRRRTCYIAPERFVSALGKTSVGQDAPLLTPAMDIFSAGCVIAELFLEG  235 (1431)
T ss_pred             chhhhhcccccCCcc-CCCCCcccceEEEecCCceeeecChHhhhccccccccCCcccccChhhhhhhhhHHHHHHHhcC
Confidence            889999998654432 233221      2333445679999987331          2 56899999999999999865 


Q ss_pred             ccccccccCCCCCcee-eecCcchhhhhHHHHHHHHHHHHhcCCCCCChHHHHHHHH
Q 018699          266 SYMEIEKKASPDGGLV-YLPKLSFKRYWKVELWKSLFTNLLNMSSGNDKEVLQNLQK  321 (351)
Q Consensus       266 ~~p~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~~  321 (351)
                      ++||....-. .+.-- .......-+...+..++++|..|++.||.+|.++++.|+.
T Consensus       236 ~PlF~LSQL~-aYr~~~~~~~e~~Le~Ied~~~Rnlil~Mi~rdPs~RlSAedyL~~  291 (1431)
T KOG1240|consen  236 RPLFTLSQLL-AYRSGNADDPEQLLEKIEDVSLRNLILSMIQRDPSKRLSAEDYLQK  291 (1431)
T ss_pred             CCcccHHHHH-hHhccCccCHHHHHHhCcCccHHHHHHHHHccCchhccCHHHHHHh
Confidence            6776532211 10000 0011111111222678999999999999999999999985

>KOG4158 consensus BRPK/PTEN-induced protein kinase [Signal transduction mechanisms]

Probab=99.87  E-value=7.6e-22  Score=172.74  Aligned_cols=178  Identities=15%  Similarity=0.102  Sum_probs=139.0

Q ss_pred             CeeEEEEEecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeeccCCC
Q 018699          119 DYSILVCDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRS  198 (351)
Q Consensus       119 ~~~~lv~e~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~~~  198 (351)
                      ..+|+||..+ ..+|.+++..     ...+......++.|+++|+.|||.+||.|||+|.+||++..+++          
T Consensus       316 ~tlylvMkrY-~~tLr~yl~~-----~~~s~r~~~~~laQlLEav~hL~~hgvAhRDlKSDNiL~ElddD----------  379 (598)
T KOG4158|consen  316 KTLYLVMKRY-RQTLREYLWT-----RHRSYRTGRVILAQLLEAVTHLHKHGVAHRDLKSDNILLELDDD----------  379 (598)
T ss_pred             ceEEEehhcc-hhhHHHHHhc-----CCCchHHHHHHHHHHHHHHHHHHHccchhhcccccceEEEecCC----------
Confidence            4679999999 6699999987     35667777888999999999999999999999999999998766          


Q ss_pred             CCcccCCeEEeecCCccccccCCCC----ccccccccCCCcccceeccCCC-----C-CccchHhHHHHHHHHHHhCccc
Q 018699          199 GPWQDQGLCLVDWGRGIDLHLFPDN----MEFEGDCRTSGFRCIEMQEKKP-----W-KFQVDTYGLCAIVHMMLHNSYM  268 (351)
Q Consensus       199 ~~~~~~~~~l~Dfg~a~~~~~~~~~----~~~~~~~g~~~y~aPE~~~~~~-----~-~~~~DiwslG~il~~l~~g~~p  268 (351)
                         .-..++|+||||+.......-.    +...+.-|+...||||+....+     . ..++|.|+.|.+.||++....|
T Consensus       380 ---~~P~LVvaDFGCcLAd~~hGlqlpy~S~~Vd~GGNa~lmAPEi~ta~PGp~avvny~kAD~WA~GalaYEIfg~~NP  456 (598)
T KOG4158|consen  380 ---EIPQLVVADFGCCLADDNHGLQLPYESDEVDLGGNAKLMAPEIATAVPGPNAVVNYEKADTWAAGALAYEIFGRSNP  456 (598)
T ss_pred             ---CCcEEEEcccceeeeccccccccccccccccCCCcceecchhhhhcCCCCceeeccchhhhhhhhhhHHHHhccCCc
Confidence               4456899999998643321111    1223345778899999984322     1 2689999999999999999999


Q ss_pred             cccccC--CCCCceeeecCcchhhhhHHHHHHHHHHHHhcCCCCCChHHH
Q 018699          269 EIEKKA--SPDGGLVYLPKLSFKRYWKVELWKSLFTNLLNMSSGNDKEVL  316 (351)
Q Consensus       269 ~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~  316 (351)
                      |.....  .+...|....-+.+|+.+. +.+++++..+|++||.+|++..
T Consensus       457 FY~rGem~L~~r~Yqe~qLPalp~~vp-p~~rqlV~~lL~r~pskRvsp~  505 (598)
T KOG4158|consen  457 FYKRGEMLLDTRTYQESQLPALPSRVP-PVARQLVFDLLKRDPSKRVSPN  505 (598)
T ss_pred             ccccchheechhhhhhhhCCCCcccCC-hHHHHHHHHHhcCCccccCCcc
Confidence            987432  2234455556667777777 8999999999999999998753

>PRK10359 lipopolysaccharide core biosynthesis protein; Provisional

Probab=99.86  E-value=1.3e-21  Score=165.04  Aligned_cols=170  Identities=14%  Similarity=0.139  Sum_probs=119.9

Q ss_pred             CeeEEEEEEeeccCceEEEEEEecCCCCceEEEEecCCCCChHHHH---------HHHHHhhhccccccccccceeeecc
Q 018699           47 GKKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFPWEFYM---------YRQLDQRISGRERSSFGFAHRIHLY  117 (351)
Q Consensus        47 ~~~Y~i~~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~~~e~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~  117 (351)
                      .++|++.+.||.|+||.||++. +  +++.+|+|++.+........         ++...+......++++..+..+...
T Consensus        30 ~~~y~~~~~l~~~~f~~v~l~~-~--~~~~~iiKvf~~~~~~~~~~~~~f~~g~~~e~Ea~~l~rL~~~GI~~~~d~~~~  106 (232)
T PRK10359         30 SYNIKTIKVFRNIDDTKVSLID-T--DYGKYILKVFAPKVKRTERFLKSFVKGDYYENLIVQTDRVRSEGLASLNDFYLL  106 (232)
T ss_pred             hCceEEEEEecCCCceEEEEEe-c--CCCcEEEEEechhcCchHHHHHhhhhhHHHHHHHHHHHHHHHCCCCcceEeeee
Confidence            5799999999999999999976 3  35679999998654432222         1222223344455666666555332


Q ss_pred             --------cCeeEEEEEecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCc
Q 018699          118 --------SDYSILVCDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDE  189 (351)
Q Consensus       118 --------~~~~~lv~e~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~  189 (351)
                              .+..+++|||++|.+|.++..        +++.    ...+++.++..+|+.|++|||++|.||+++     
T Consensus       107 ~~~~~~~~~~~~~lvmEyi~G~tL~~~~~--------~~~~----~~~~i~~~l~~lH~~gi~H~Dikp~Nili~-----  169 (232)
T PRK10359        107 AERKTLRYAHTYIMLIEYIEGVELNDMPE--------ISED----VKAKIKASIESLHQHGMVSGDPHKGNFIVS-----  169 (232)
T ss_pred             cccccccccCCeEEEEEEECCccHHHhhh--------ccHH----HHHHHHHHHHHHHHcCCccCCCChHHEEEe-----
Confidence                    346799999999999988632        2222    356999999999999999999999999998     


Q ss_pred             ceeeccCCCCCcccCCeEEeecCCccccccCCCCccccccccCCCcccceeccCCCCCccchHhHHHHHHHHHH
Q 018699          190 LTVLDHDRSGPWQDQGLCLVDWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQEKKPWKFQVDTYGLCAIVHMML  263 (351)
Q Consensus       190 ~~~~~~~~~~~~~~~~~~l~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~l~  263 (351)
                                  +++ ++|+|||......   .....           ..+.....+..++||||||+++..+.
T Consensus       170 ------------~~g-i~liDfg~~~~~~---e~~a~-----------d~~vler~y~~~~di~~lg~~~~~~~  216 (232)
T PRK10359        170 ------------KNG-LRIIDLSGKRCTA---QRKAK-----------DRIDLERHYGIKNEIKDLGYYLLIYK  216 (232)
T ss_pred             ------------CCC-EEEEECCCccccc---chhhH-----------HHHHHHhHhcccccccceeEeehHHH
Confidence                        566 9999999775321   11100           11334445677899999999887655

>cd05147 RIO1_euk RIO kinase family; eukaryotic RIO1, catalytic domain

Probab=99.85  E-value=6.6e-21  Score=158.80  Aligned_cols=137  Identities=18%  Similarity=0.270  Sum_probs=95.1

Q ss_pred             EEEeeccCceEEEEEEecCCCCceEEEEecCCCCChHHH---------H------------------HHHHHhhhccccc
Q 018699           53 KGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFPWEFY---------M------------------YRQLDQRISGRER  105 (351)
Q Consensus        53 ~~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~~~e~~---------~------------------~~~~~~~~~~~~~  105 (351)
                      ...||+|++|.||+|.+ . +|+.||+|++++.......         .                  ..+. ..+.....
T Consensus         2 ~~~ig~G~~~~Vy~a~~-~-~g~~vAvKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~-~~l~~l~~   78 (190)
T cd05147           2 NGCISTGKEANVYHATT-A-NGEERAIKIYKTSILVFKDRDRYVSGEFRFRHGYCKSNPRKMVRTWAEKEM-RNLKRLVT   78 (190)
T ss_pred             CCccccccceEEEEEEC-C-CCCEEEEEEEEecccccccHHHhhcCCchhhccccCCCHHHHHHHHHHHHH-HHHHHHHH
Confidence            46799999999999994 4 7899999998754221000         0                  0000 11111112


Q ss_pred             cccccceeeecccCeeEEEEEecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHH-HHCCceecCCCCCcEEEe
Q 018699          106 SSFGFAHRIHLYSDYSILVCDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESL-HDVGIIHGDFKPDNLLIR  184 (351)
Q Consensus       106 ~~~~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~L-H~~~i~H~dl~p~Nill~  184 (351)
                      +++..+..+.  ....++||||++|+++......    ...++...+..++.|++.++.++ |+.||+||||||+||+++
T Consensus        79 ~~v~~p~~~~--~~~~~iVmE~i~g~~l~~~~~~----~~~~~~~~~~~i~~qi~~~L~~l~H~~giiHrDlkP~NIli~  152 (190)
T cd05147          79 AGIPCPEPIL--LKSHVLVMEFIGDDGWAAPRLK----DAPLSESKARELYLQVIQIMRILYQDCRLVHADLSEYNLLYH  152 (190)
T ss_pred             CCCCCCcEEE--ecCCEEEEEEeCCCCCcchhhh----cCCCCHHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEEE
Confidence            2222222222  1233899999988777654333    35788999999999999999999 799999999999999998


Q ss_pred             ecCCcceeeccCCCCCcccCCeEEeecCCccc
Q 018699          185 YARDELTVLDHDRSGPWQDQGLCLVDWGRGID  216 (351)
Q Consensus       185 ~~~~~~~~~~~~~~~~~~~~~~~l~Dfg~a~~  216 (351)
                                       . +.++|+|||+|..
T Consensus       153 -----------------~-~~v~LiDFG~a~~  166 (190)
T cd05147         153 -----------------D-GKLYIIDVSQSVE  166 (190)
T ss_pred             -----------------C-CcEEEEEcccccc
Confidence                             2 4589999999864

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. This subfamily is composed of RIO1 proteins from eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle progression and c

>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]

Probab=99.84  E-value=1.7e-22  Score=186.59  Aligned_cols=235  Identities=20%  Similarity=0.217  Sum_probs=180.7

Q ss_pred             EeeccCceEEEEEEe--cCCCCceEEEEecCCCCChHHH--HHHHHHhhhccc-cccccccceeeecccCeeEEEEEecC
Q 018699           55 CAGQGGFAKVFKAYV--NGDPEDVVALKIQKPAFPWEFY--MYRQLDQRISGR-ERSSFGFAHRIHLYSDYSILVCDYLS  129 (351)
Q Consensus        55 ~lg~G~~g~V~~a~~--~~~~~~~vaiK~~~~~~~~e~~--~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~lv~e~~~  129 (351)
                      .+|.|+||.|++++-  ..+.+..+|+|+..+.......  ........+... .++.++..+..+..+...++++++..
T Consensus         1 vlg~g~~gkvfLvrk~~g~da~~~yamkvl~k~t~~~~~~~~t~~er~il~~~~~~~f~v~lhyafqt~~kl~l~ld~~r   80 (612)
T KOG0603|consen    1 VLGQGSYGKVFLVRKAGGADAGHLYAMKVLKKATLKVRDRTHTKQERIILAFVHNTPFLVKLHYAFQTDGKLYLILDFLR   80 (612)
T ss_pred             CCCcCCCcchHHHHHhccccccchhhhhcccccccccccccccccHHHHHhhccCCCceeeeeeeeccccchhHhhhhcc
Confidence            378999999998873  2345678899987654221100  111111112222 25566677777788899999999999


Q ss_pred             CCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeeccCCCCCcccCCeEEe
Q 018699          130 QGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSGPWQDQGLCLV  209 (351)
Q Consensus       130 ~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~~~~~~~~~~~~l~  209 (351)
                      ||.|...+..    ...+.+.....+...++-++.++|+.+++|+|+|++||+++                 .+|.+++.
T Consensus        81 gg~lft~l~~----~~~f~~~~~~~~~aelaLald~lh~l~iiyrd~k~enilld-----------------~~Ghi~~t  139 (612)
T KOG0603|consen   81 GGDLFTRLSK----EVMFDELDVAFYLAELALALDHLHKLGIAYRDYKLENVLLL-----------------LEGHIKLT  139 (612)
T ss_pred             cchhhhcccc----CCchHHHHHHHHHHHHHHHHhhcchhHHHHhcccccceeec-----------------ccCccccC
Confidence            9999988877    36788888889999999999999999999999999999999                 88899999


Q ss_pred             ecCCccccccCCCCccccccccCCCcccceeccCCCCCccchHhHHHHHHHHHHhCccccccccCCCCCceeeecCcchh
Q 018699          210 DWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQEKKPWKFQVDTYGLCAIVHMMLHNSYMEIEKKASPDGGLVYLPKLSFK  289 (351)
Q Consensus       210 Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~  289 (351)
                      |||.++....      ....|||..|||||++.  ....++|+||+|+++|+|++|..||..+    ....+......+|
T Consensus       140 dfglske~v~------~~~~cgt~eymApEI~~--gh~~a~D~ws~gvl~felltg~~pf~~~----~~~~Il~~~~~~p  207 (612)
T KOG0603|consen  140 DFGLSKEAVK------EKIACGTYEYRAPEIIN--GHLSAADWWSFGVLAFELLTGTLPFGGD----TMKRILKAELEMP  207 (612)
T ss_pred             CchhhhHhHh------hhhcccchhhhhhHhhh--ccCCcccchhhhhhHHHHhhCCCCCchH----HHHHHhhhccCCc
Confidence            9998865321      11128999999999998  4578999999999999999999999872    2233445566777


Q ss_pred             hhhHHHHHHHHHHHHhcCCCCCChHH-----HHHHHHHH
Q 018699          290 RYWKVELWKSLFTNLLNMSSGNDKEV-----LQNLQKSF  323 (351)
Q Consensus       290 ~~~~~~~~~~li~~~L~~dP~~R~s~-----~e~l~~~~  323 (351)
                      ...+ ..+++++..++..+|.+|.-.     .++.+|.|
T Consensus       208 ~~l~-~~a~~~~~~l~~r~p~nrLg~~~~~~~eik~h~f  245 (612)
T KOG0603|consen  208 RELS-AEARSLFRQLFKRNPENRLGAGPDGVDEIKQHEF  245 (612)
T ss_pred             hhhh-HHHHHHHHHHHhhCHHHHhccCcchhHHHhccch
Confidence            7777 899999999999999999754     66677775

>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]

Probab=99.83  E-value=1.7e-21  Score=188.69  Aligned_cols=226  Identities=20%  Similarity=0.255  Sum_probs=155.9

Q ss_pred             eeEEEEEEeeccCceEEEEEEecCCCCceEEEEecCCCCChHHHHHHHHHhhhccccccccccceeeecccCeeEEEEEe
Q 018699           48 KKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFPWEFYMYRQLDQRISGRERSSFGFAHRIHLYSDYSILVCDY  127 (351)
Q Consensus        48 ~~Y~i~~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~  127 (351)
                      ..|+.++.|..|+||.||.++ +..+.+.+|+|+-+..     -+++.                  +....+..++|   
T Consensus        83 ~df~~IklisngAygavylvr-h~~trqrfa~kiNkq~-----lilRn------------------ilt~a~npfvv---  135 (1205)
T KOG0606|consen   83 SDFNTIKLISNGAYGAVYLVR-HKETRQRFAMKINKQN-----LILRN------------------ILTFAGNPFVV---  135 (1205)
T ss_pred             cccceeEeeccCCCCceeeee-ccccccchhhcccccc-----hhhhc------------------cccccCCccee---
Confidence            679999999999999999999 5778889999553221     11111                  11112222333   


Q ss_pred             cCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeeccCCCCCcccCCeE
Q 018699          128 LSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSGPWQDQGLC  207 (351)
Q Consensus       128 ~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~~~~~~~~~~~~  207 (351)
                         |+=.+.++.    -++++...        +.+++|||+.||+|+|+||+|.++.                 .-|.+|
T Consensus       136 ---gDc~tllk~----~g~lPvdm--------vla~Eylh~ygivhrdlkpdnllIT-----------------~mGhiK  183 (1205)
T KOG0606|consen  136 ---GDCATLLKN----IGPLPVDM--------VLAVEYLHSYGIVHRDLKPDNLLIT-----------------SMGHIK  183 (1205)
T ss_pred             ---chhhhhccc----CCCCcchh--------hHHhHhhccCCeecCCCCCCcceee-----------------eccccc
Confidence               333344433    23454333        7789999999999999999999999                 889999


Q ss_pred             EeecCCccccccCCC-----------Cccc--cccccCCCcccceeccCCCCCccchHhHHHHHHHHHHhCccccccccC
Q 018699          208 LVDWGRGIDLHLFPD-----------NMEF--EGDCRTSGFRCIEMQEKKPWKFQVDTYGLCAIVHMMLHNSYMEIEKKA  274 (351)
Q Consensus       208 l~Dfg~a~~~~~~~~-----------~~~~--~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~p~~~~~~  274 (351)
                      ++|||++........           ...+  ...+||+.|+|||++....|...+|+|++|+|+|+++.|..||...++
T Consensus       184 lTDfgLsk~GLms~atnl~eg~I~k~t~Ef~dKqvcgTPeyiaPeVilrqgygkpvdwwamGiIlyeFLVgcvpffGdtp  263 (1205)
T KOG0606|consen  184 LTDFGLSKKGLMSLATNLKEGHIEKDTHEFQDKQVCGTPEYIAPEVILRQGYGKPVDWWAMGIILYEFLVGCVPFFGDTP  263 (1205)
T ss_pred             ccchhhhhhhhhhccchhhhcchHHHHHHhhhccccCCccccChhhhhhhccCCCccHHHHHHHHHHHheeeeeccCCCH
Confidence            999998753211110           0111  234799999999999999999999999999999999999999998865


Q ss_pred             CCCCceeeecCcchhhh---hHHHHHHHHHHHHhcCCCCCCh---HHHHHHHHHHHHHHhhChHH
Q 018699          275 SPDGGLVYLPKLSFKRY---WKVELWKSLFTNLLNMSSGNDK---EVLQNLQKSFQDYLCSNPQL  333 (351)
Q Consensus       275 ~~~~~~~~~~~~~~~~~---~~~~~~~~li~~~L~~dP~~R~---s~~e~l~~~~~~~~~~~~~~  333 (351)
                      .+...........+++.   .. .+++++|.++|..+|..|.   .+.++-+|.|...+.-...+
T Consensus       264 eelfg~visd~i~wpE~dea~p-~Ea~dli~~LL~qnp~~Rlgt~ga~evk~h~ff~~LDw~~ll  327 (1205)
T KOG0606|consen  264 EELFGQVISDDIEWPEEDEALP-PEAQDLIEQLLRQNPLCRLGTGGALEVKQHGFFQLLDWKSLL  327 (1205)
T ss_pred             HHHHhhhhhhhccccccCcCCC-HHHHHHHHHHHHhChHhhcccchhhhhhhccceeecccchhh
Confidence            42211111111111111   11 7899999999999999995   45555568776665555333

>cd05145 RIO1_like RIO kinase family; RIO1, RIO3 and similar proteins, catalytic domain

Probab=99.82  E-value=1.1e-19  Score=151.83  Aligned_cols=139  Identities=19%  Similarity=0.256  Sum_probs=95.5

Q ss_pred             EEEeeccCceEEEEEEecCCCCceEEEEecCCCCChH---HH-------------------H----HHHHHhhhcccccc
Q 018699           53 KGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFPWE---FY-------------------M----YRQLDQRISGRERS  106 (351)
Q Consensus        53 ~~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~~~e---~~-------------------~----~~~~~~~~~~~~~~  106 (351)
                      .+.||+|++|.||+|.+ . +|+.||||++.+.....   .+                   .    .......+....++
T Consensus         2 ~~~ig~G~~~~Vy~a~~-~-~g~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~   79 (190)
T cd05145           2 NGCISTGKEANVYHART-G-DGEELAVKIYKTSTLSFKDRDKYIEGDPRFRSRYSKSNPRKLVFAWAEKEFRNLKRLYEA   79 (190)
T ss_pred             CceeecCCCcEEEEEEc-C-CCCEEEEEEEEcCcceEeeHHHHhcCCcccccccccCCHHHHHHHHHHHHHHHHHHHHhC
Confidence            57899999999999994 4 78999999987653210   00                   0    00000111112223


Q ss_pred             ccccceeeecccCeeEEEEEecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHH-CCceecCCCCCcEEEee
Q 018699          107 SFGFAHRIHLYSDYSILVCDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHD-VGIIHGDFKPDNLLIRY  185 (351)
Q Consensus       107 ~~~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~-~~i~H~dl~p~Nill~~  185 (351)
                      ++..+..+...  ..|+||||++|+++......    ...++...+..++.|++.++.++|+ .||+|+||||+||+++ 
T Consensus        80 ~i~~p~~~~~~--~~~lVmE~~~g~~~~~~~l~----~~~~~~~~~~~i~~~l~~~l~~lH~~~givHrDlkP~NIll~-  152 (190)
T cd05145          80 GVPVPEPILLK--KNVLVMEFIGDDGSPAPRLK----DVPLEEEEAEELYEQVVEQMRRLYQEAGLVHGDLSEYNILYH-  152 (190)
T ss_pred             CCCCceEEEec--CCEEEEEEecCCCchhhhhh----hccCCHHHHHHHHHHHHHHHHHHHHhCCEecCCCChhhEEEE-
Confidence            33333333222  24899999988755443222    2467788899999999999999999 9999999999999997 


Q ss_pred             cCCcceeeccCCCCCcccCCeEEeecCCcccc
Q 018699          186 ARDELTVLDHDRSGPWQDQGLCLVDWGRGIDL  217 (351)
Q Consensus       186 ~~~~~~~~~~~~~~~~~~~~~~l~Dfg~a~~~  217 (351)
                                       ++.++|+|||++...
T Consensus       153 -----------------~~~~~liDFG~a~~~  167 (190)
T cd05145         153 -----------------DGKPYIIDVSQAVEL  167 (190)
T ss_pred             -----------------CCCEEEEEcccceec
Confidence                             234899999998643

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. In addition, RIO3 is present in multicellular eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle pro

>KOG1033 consensus eIF-2alpha kinase PEK/EIF2AK3 [Translation, ribosomal structure and biogenesis]

Probab=99.79  E-value=4.4e-20  Score=167.60  Aligned_cols=177  Identities=19%  Similarity=0.189  Sum_probs=132.6

Q ss_pred             cCeeEEEEEecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeeccCC
Q 018699          118 SDYSILVCDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDR  197 (351)
Q Consensus       118 ~~~~~lv~e~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~~  197 (351)
                      ..++|+.|++|...+|.+++..... +..-+......++.|++.|+.|   +|.+|+|++|.||++.             
T Consensus       328 ~~~lyI~Mn~c~~~tledWl~rr~~-~e~~s~s~~~~~~~q~~~~~~y---k~~ihrdlkp~nif~~-------------  390 (516)
T KOG1033|consen  328 KVYLYIQMNLCEKETLEDWLRRRRT-GEERSLSLMLDIFKQIAPAVEY---KGLIHRDLKPSNIFFS-------------  390 (516)
T ss_pred             ccchhhhhhhhhhhhHHHHhhCCCc-ccccchhHHHHHHHhhccchhh---ccchhhhccccccccc-------------
Confidence            3468999999999999999975321 3456777888999999999999   9999999999999998             


Q ss_pred             CCCcccCCeEEeecCCccccccCC----CCccccccccCCCcccceeccCCCCCccchHhHHHHHHHHHHh-Ccccccc-
Q 018699          198 SGPWQDQGLCLVDWGRGIDLHLFP----DNMEFEGDCRTSGFRCIEMQEKKPWKFQVDTYGLCAIVHMMLH-NSYMEIE-  271 (351)
Q Consensus       198 ~~~~~~~~~~l~Dfg~a~~~~~~~----~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~-g~~p~~~-  271 (351)
                          .+..++|.|||+.......+    .........||..||+||.+.+..|+.++||||||+|++|++. -...+.. 
T Consensus       391 ----~d~q~kIgDFgl~ts~~~~~~~~~~~a~~t~~~gt~~YmsPEQi~g~~y~~kvdIyaLGlil~EL~~~f~T~~er~  466 (516)
T KOG1033|consen  391 ----DDDQLKIGDFGLVTSQDKDETVAPAAASHTQQVGTLLYMSPEQIRGQQYSEKVDIYALGLILAELLIQFSTQFERI  466 (516)
T ss_pred             ----cchhhhhhhhhheeecccCCcccchhhhhhhcccccccCCHHHHhhhhhhhhcchhhHHHHHHHHHHHhccHHHHH
Confidence                55679999999886543222    1224556689999999999999999999999999999999997 2222221 


Q ss_pred             --ccCCCCCceeeecCcchh-hhhHH-HHHHHHHHHHhcCCCCCChHHHHHHHHHH
Q 018699          272 --KKASPDGGLVYLPKLSFK-RYWKV-ELWKSLFTNLLNMSSGNDKEVLQNLQKSF  323 (351)
Q Consensus       272 --~~~~~~~~~~~~~~~~~~-~~~~~-~~~~~li~~~L~~dP~~R~s~~e~l~~~~  323 (351)
                        ......+.        +| ..+.+ +.-..|+.+||.+.|.+||++.+.-.|.|
T Consensus       467 ~t~~d~r~g~--------ip~~~~~d~p~e~~ll~~lls~~p~~RP~~~~~~~~~~  514 (516)
T KOG1033|consen  467 ATLTDIRDGI--------IPPEFLQDYPEEYTLLQQLLSPSPEERPSAIEVALHEF  514 (516)
T ss_pred             HhhhhhhcCC--------CChHHhhcCcHHHHHHHHhcCCCcccCchHHHHhhhhh
Confidence              11111222        22 22221 44468999999999999996665554543

>PRK12274 serine/threonine protein kinase; Provisional

Probab=99.79  E-value=2.4e-18  Score=142.36  Aligned_cols=189  Identities=12%  Similarity=0.055  Sum_probs=125.8

Q ss_pred             EEEEEeeccCceEEEEEEecCCCCceEEEEecCCCCChHHH----HHHHHHhhhccc-cccccccceeeecccCeeEEEE
Q 018699           51 QIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFPWEFY----MYRQLDQRISGR-ERSSFGFAHRIHLYSDYSILVC  125 (351)
Q Consensus        51 ~i~~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~~~e~~----~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~lv~  125 (351)
                      -+...|++|+||+|+++.   ..+..++.+.+.....+...    ..+.....+... .+++++.+..+    +..+++|
T Consensus         5 ~~~~~l~~~~f~~v~~~~---~~~~k~~~~~l~~~~~~~~~~~~~l~~rE~~iL~~L~~~~~vP~ll~~----~~~~lvm   77 (218)
T PRK12274          5 AVNEPLKSDTFGRILLVR---GGERKFVRRDLSAAPWWLRGVAWWLARREALALRQLDGLPRTPRLLHW----DGRHLDR   77 (218)
T ss_pred             ccceeecCCCcceEEEee---cCCceeeecccccchhhhhhHHHHHHHHHHHHHHhcCCCCCCCEEEEE----cCEEEEE
Confidence            357889999999999886   25677887776654332221    111111111222 22334444332    3468999


Q ss_pred             EecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCC-CCCcEEEeecCCcceeeccCCCCCcccC
Q 018699          126 DYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDF-KPDNLLIRYARDELTVLDHDRSGPWQDQ  204 (351)
Q Consensus       126 e~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl-~p~Nill~~~~~~~~~~~~~~~~~~~~~  204 (351)
                      ||+.|.+|......     .      ...++.|++.++.++|++||+|+|| +|+||+++                 .++
T Consensus        78 eyI~G~~L~~~~~~-----~------~~~~~~qi~~~L~~lH~~GIvHrDL~kp~NILv~-----------------~~g  129 (218)
T PRK12274         78 SYLAGAAMYQRPPR-----G------DLAYFRAARRLLQQLHRCGVAHNDLAKEANWLVQ-----------------EDG  129 (218)
T ss_pred             eeecCccHHhhhhh-----h------hHHHHHHHHHHHHHHHHCcCccCCCCCcceEEEc-----------------CCC
Confidence            99999998754321     1      1246789999999999999999999 79999998                 667


Q ss_pred             CeEEeecCCccccccCCCC---cc--------ccccccCCCcccceeccCC-CCC-ccchHhHHHHHHHHHHhCcccccc
Q 018699          205 GLCLVDWGRGIDLHLFPDN---ME--------FEGDCRTSGFRCIEMQEKK-PWK-FQVDTYGLCAIVHMMLHNSYMEIE  271 (351)
Q Consensus       205 ~~~l~Dfg~a~~~~~~~~~---~~--------~~~~~g~~~y~aPE~~~~~-~~~-~~~DiwslG~il~~l~~g~~p~~~  271 (351)
                      .++|+|||++.........   ..        ..-...++.+++|+...-. ..+ .+.++++.|+-+|.++|+..|+..
T Consensus       130 ~i~LIDFG~A~~~~~~~~~~r~L~~rDl~~llk~~~~y~~~~l~~~~~~~l~~~~~~~~~w~~~g~~~~~~~~~~~~~~~  209 (218)
T PRK12274        130 SPAVIDFQLAVRGNPRARWMRLLAREDLRHLLKHKRMYCPAALTPVERRVLKRTSWIRELWFATGKPVYRFVTRRVLHWE  209 (218)
T ss_pred             CEEEEECCCceecCCcchHHHHHHHHHHHHHHHHHHhcCCCCCCHHHHhhhccchhHHHHHHHhcchHHHHHhccCCccc
Confidence            7999999999743321110   00        0011256778888764322 233 678999999999999999999876


Q ss_pred             ccC
Q 018699          272 KKA  274 (351)
Q Consensus       272 ~~~  274 (351)
                      ..+
T Consensus       210 ~~~  212 (218)
T PRK12274        210 DNE  212 (218)
T ss_pred             cCC
Confidence            554

>KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms]

Probab=99.77  E-value=2e-19  Score=150.42  Aligned_cols=242  Identities=10%  Similarity=0.091  Sum_probs=174.3

Q ss_pred             EcCeeEEEEEEeeccCceEEEEEEecCCCCceEEEEecCCCCChHHHHHHHHHhh---hccccccccccceeeecccCee
Q 018699           45 IGGKKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFPWEFYMYRQLDQR---ISGRERSSFGFAHRIHLYSDYS  121 (351)
Q Consensus        45 i~~~~Y~i~~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~~~e~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~  121 (351)
                      |.-....+..+|.....|..|+|+|.++   .++.|++.-.. ....+-+.+.++   +..-.|+++..+..-+..+..+
T Consensus       187 id~~~lnl~tkl~e~hsgelwrgrwqgn---divakil~vr~-~t~risrdfneefp~lrifshpnilpvlgacnsppnl  262 (448)
T KOG0195|consen  187 IDVSSLNLITKLAESHSGELWRGRWQGN---DIVAKILNVRE-VTARISRDFNEEFPALRIFSHPNILPVLGACNSPPNL  262 (448)
T ss_pred             cchhhhhhhhhhccCCCcccccccccCc---chhhhhhhhhh-cchhhcchhhhhCcceeeecCCchhhhhhhccCCCCc
Confidence            3446777889999999999999998533   36677654221 122333333333   2333456666555556667788


Q ss_pred             EEEEEecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCC--ceecCCCCCcEEEeecCCcceeeccCCCC
Q 018699          122 ILVCDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVG--IIHGDFKPDNLLIRYARDELTVLDHDRSG  199 (351)
Q Consensus       122 ~lv~e~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~--i~H~dl~p~Nill~~~~~~~~~~~~~~~~  199 (351)
                      .+|..|++.|+|+..+....  +...+..++..++.+++.|++|||+..  |.---++...+++|               
T Consensus       263 v~isq~mp~gslynvlhe~t--~vvvd~sqav~faldiargmaflhslep~ipr~~lns~hvmid---------------  325 (448)
T KOG0195|consen  263 VIISQYMPFGSLYNVLHEQT--SVVVDHSQAVRFALDIARGMAFLHSLEPMIPRFYLNSKHVMID---------------  325 (448)
T ss_pred             eEeeeeccchHHHHHHhcCc--cEEEecchHHHHHHHHHhhHHHHhhcchhhhhhhcccceEEec---------------
Confidence            99999999999999998743  345688899999999999999999873  33446888899998               


Q ss_pred             CcccCCeEE--eecCCccccccCCCCccccccccCCCcccceeccCCCCC---ccchHhHHHHHHHHHHhCccccccccC
Q 018699          200 PWQDQGLCL--VDWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQEKKPWK---FQVDTYGLCAIVHMMLHNSYMEIEKKA  274 (351)
Q Consensus       200 ~~~~~~~~l--~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~---~~~DiwslG~il~~l~~g~~p~~~~~~  274 (351)
                        .+.+.+|  +|--++.    ..     .+..-.|.|++||.+..++-+   .++|+||++++++||-|...||....+
T Consensus       326 --edltarismad~kfsf----qe-----~gr~y~pawmspealqrkped~n~raadmwsfaillwel~trevpfadlsp  394 (448)
T KOG0195|consen  326 --EDLTARISMADTKFSF----QE-----VGRAYSPAWMSPEALQRKPEDLNIRAADMWSFAILLWELNTREVPFADLSP  394 (448)
T ss_pred             --chhhhheecccceeee----ec-----cccccCcccCCHHHHhcCchhcchhhhhHHHHHHHHHHhhccccccccCCc
Confidence              3333333  2222111    11     122346889999999877654   689999999999999999999998887


Q ss_pred             CCCCcee--eecCcchhhhhHHHHHHHHHHHHhcCCCCCChHHHHHH
Q 018699          275 SPDGGLV--YLPKLSFKRYWKVELWKSLFTNLLNMSSGNDKEVLQNL  319 (351)
Q Consensus       275 ~~~~~~~--~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l  319 (351)
                      .+.+..+  ......+|...+ ..+..||+-|++.||.+||....++
T Consensus       395 mecgmkialeglrv~ippgis-~hm~klm~icmnedpgkrpkfdmiv  440 (448)
T KOG0195|consen  395 MECGMKIALEGLRVHIPPGIS-RHMNKLMNICMNEDPGKRPKFDMIV  440 (448)
T ss_pred             hhhhhhhhhccccccCCCCcc-HHHHHHHHHHhcCCCCcCCCcceeh
Confidence            7554443  245556676666 8889999999999999999987664

>smart00090 RIO RIO-like kinase

Probab=99.77  E-value=3.7e-18  Score=147.09  Aligned_cols=146  Identities=18%  Similarity=0.236  Sum_probs=100.1

Q ss_pred             CeeEEEEEEeeccCceEEEEEEecCCCCceEEEEecCCCCChH---------------------HHHHHHHHhh---hcc
Q 018699           47 GKKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFPWE---------------------FYMYRQLDQR---ISG  102 (351)
Q Consensus        47 ~~~Y~i~~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~~~e---------------------~~~~~~~~~~---~~~  102 (351)
                      |.-|.+.+.||.|++|.||+|.++..+|+.||+|++.......                     ......+..+   +..
T Consensus        27 ~~~~~i~~~Lg~G~~g~Vy~a~~~~~~g~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~L~~  106 (237)
T smart00090       27 GILSAIGGCISTGKEANVYHALDFDGSGKERAVKIYRTGTLEFKRRDRYVDGDFRFKYRKINPRKLVRLWAEKEFRNLQR  106 (237)
T ss_pred             CchHHhCCeeccCcceeEEEEEecCCCCcEEEEEEEEcCcceecchhhhcccchhhccCCCCHHHHHHHHHHHHHHHHHH
Confidence            4568999999999999999998445678999999987542100                     0000011111   111


Q ss_pred             ccccccccceeeecccCeeEEEEEecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCC-ceecCCCCCcE
Q 018699          103 RERSSFGFAHRIHLYSDYSILVCDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVG-IIHGDFKPDNL  181 (351)
Q Consensus       103 ~~~~~~~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~-i~H~dl~p~Ni  181 (351)
                      ..+..+..+..+. . ...++||||++|.+|......    +..+....+..++.|++.++.+||++| |+|+||+|+||
T Consensus       107 L~~~~i~~p~~~~-~-~~~~lV~E~~~g~~L~~~~~~----~~~~~~~~~~~i~~qi~~~l~~LH~~g~iiH~Dikp~NI  180 (237)
T smart00090      107 LYEAGVPVPKPIA-W-RRNVLVMEFIGGDGLPAPRLK----DVEPEEEEEFELYDDILEEMRKLYKEGELVHGDLSEYNI  180 (237)
T ss_pred             HHhcCCCCCeeeE-e-cCceEEEEEecCCcccccccc----cCCcchHHHHHHHHHHHHHHHHHHhcCCEEeCCCChhhE
Confidence            1111122222221 1 235899999988888765533    345666777899999999999999999 99999999999


Q ss_pred             EEeecCCcceeeccCCCCCcccCCeEEeecCCccc
Q 018699          182 LIRYARDELTVLDHDRSGPWQDQGLCLVDWGRGID  216 (351)
Q Consensus       182 ll~~~~~~~~~~~~~~~~~~~~~~~~l~Dfg~a~~  216 (351)
                      +++                  .+.++|+|||.+..
T Consensus       181 li~------------------~~~i~LiDFg~a~~  197 (237)
T smart00090      181 LVH------------------DGKVVIIDVSQSVE  197 (237)
T ss_pred             EEE------------------CCCEEEEEChhhhc
Confidence            998                  13489999998753

>KOG1023 consensus Natriuretic peptide receptor, guanylate cyclase [Signal transduction mechanisms]

Probab=99.74  E-value=3.5e-17  Score=151.32  Aligned_cols=224  Identities=15%  Similarity=0.102  Sum_probs=157.1

Q ss_pred             ccccccccceeeecccCeeEEEEEecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCc-eecCCCCCcE
Q 018699          103 RERSSFGFAHRIHLYSDYSILVCDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGI-IHGDFKPDNL  181 (351)
Q Consensus       103 ~~~~~~~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i-~H~dl~p~Ni  181 (351)
                      ..|.++..+......++..++|.+||+.|+|.+.+...   ...+++.....++++++.|+.|+|...| .|+.++..|.
T Consensus         4 l~h~n~~~f~g~~~~~~~~~~i~~~c~rGsl~D~i~~~---~~~~d~~F~~s~~rdi~~Gl~ylh~s~i~~hg~l~s~nC   80 (484)
T KOG1023|consen    4 LDHDNLNKFIGASVDGPEMIVIWEYCSRGSLLDILSNE---DIKLDYFFILSFIRDISKGLAYLHNSPIGYHGALKSSNC   80 (484)
T ss_pred             cchhhhhhheeeEecCCceEEEEeeecCccHHhHHhcc---ccCccHHHHHHHHHHHHHHHHHHhcCcceeeeeeccccc
Confidence            34556666777777778899999999999999999874   5678889999999999999999998866 9999999999


Q ss_pred             EEeecCCcceeeccCCCCCcccCCeEEeecCCccccccCCCCccccccccCCCcccceeccCC-------CCCccchHhH
Q 018699          182 LIRYARDELTVLDHDRSGPWQDQGLCLVDWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQEKK-------PWKFQVDTYG  254 (351)
Q Consensus       182 ll~~~~~~~~~~~~~~~~~~~~~~~~l~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~-------~~~~~~Diws  254 (351)
                      +++                 ....+||+|||+....................-|.|||.+.+.       ..+.+.||||
T Consensus        81 lvd-----------------~~w~lklt~~Gl~~~~~~~~~~~~~~~~~~~~lw~aPellr~~~~~~~~~~~~~~gdiYs  143 (484)
T KOG1023|consen   81 LVD-----------------SRWVLKLTDFGLNSLLEETAEPEAHHPIRKALLWTAPELLRGALSQSLESALTQKGDIYS  143 (484)
T ss_pred             eee-----------------eeEEEEechhhhcccccccccccccchhHHHHhccCHHHhcccccccccccccccCCeeh
Confidence            999                 8888999999987543211111111111234569999998653       1367899999


Q ss_pred             HHHHHHHHHhCccccccccCCCCC-ceee-----ecCcchhhhhH----HHHHHHHHHHHhcCCCCCChHHHHHHHHH--
Q 018699          255 LCAIVHMMLHNSYMEIEKKASPDG-GLVY-----LPKLSFKRYWK----VELWKSLFTNLLNMSSGNDKEVLQNLQKS--  322 (351)
Q Consensus       255 lG~il~~l~~g~~p~~~~~~~~~~-~~~~-----~~~~~~~~~~~----~~~~~~li~~~L~~dP~~R~s~~e~l~~~--  322 (351)
                      +|++++|+++...||......... ....     ......|..+.    .+.+..++.+||..+|..||++.++-...  
T Consensus       144 ~~ii~~ei~~r~~~~~~~~~~~~~~eii~~~~~~~~~~~rP~i~~~~e~~~~l~~l~~~cw~e~P~~rPs~~~i~~~~~~  223 (484)
T KOG1023|consen  144 FGIIMYEILFRSGPFDLRNLVEDPDEIILRVKKGGSNPFRPSIELLNELPPELLLLVARCWEEIPEKRPSIEQIRSKLLT  223 (484)
T ss_pred             HHHHHHHHHhccCccccccccCChHHHHHHHHhcCCCCcCcchhhhhhcchHHHHHHHHhcccChhhCccHHHHHhhhhh
Confidence            999999999999999764433210 0000     11111222221    15688999999999999999998876421  


Q ss_pred             ----------H-HHHHhhChHHHHHHHHHHHHhhh
Q 018699          323 ----------F-QDYLCSNPQLLKNLKELLAKQRA  346 (351)
Q Consensus       323 ----------~-~~~~~~~~~~~~~~~~~~~~~~~  346 (351)
                                + ...+.--+++..+|....++++.
T Consensus       224 ~~~~~~~~~nl~D~m~~~le~Y~~nLe~~v~eRt~  258 (484)
T KOG1023|consen  224 INKGGSSKGNLMDSLFRMLESYADNLEKLVDERTA  258 (484)
T ss_pred             hcccccccchhHHHHHHHHHHHHhhhHHHHHHHHH
Confidence                      1 12333344555555555555443

>PRK10345 hypothetical protein; Provisional

Probab=99.70  E-value=2.8e-16  Score=132.32  Aligned_cols=135  Identities=19%  Similarity=0.152  Sum_probs=93.5

Q ss_pred             EEEEeeccCceEEEEEEecCCCCceEEEEecCCCC-------ChHHHHHHHHHhhhccccccccccceeeeccc---Cee
Q 018699           52 IKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAF-------PWEFYMYRQLDQRISGRERSSFGFAHRIHLYS---DYS  121 (351)
Q Consensus        52 i~~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~-------~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~  121 (351)
                      -.+.||+|++|.||.  +. .++.. +||+.....       ..|...++.+.+  ....+++++...++....   +..
T Consensus         6 ~~~~LG~G~~~~Vy~--hp-~~~~k-~IKv~~~~~~~~~~~~~rEi~~l~~L~~--~~~~h~nIvr~yg~~et~~g~g~v   79 (210)
T PRK10345          6 EQSPLGTGRHRKCYA--HP-EDAQR-CIKIVYHRGDGGDKEIRRELKYYAHLSR--RLIDWSGIPRYYGTVETDCGTGYV   79 (210)
T ss_pred             CcceecCCCceEEEE--CC-CCcCe-EEEEEeccccchHHHHHHHHHHHHHhhc--cCCCCcccceeeEEEEeCCCCeEE
Confidence            357899999999995  33 33444 699876531       123333333322  123467888888777654   343


Q ss_pred             E-EEEEe--cCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHH-HHHHHCCceecCCCCCcEEEeecCCcceeeccCC
Q 018699          122 I-LVCDY--LSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCIL-ESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDR  197 (351)
Q Consensus       122 ~-lv~e~--~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l-~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~~  197 (351)
                      + +|+||  +.+++|.+++..     ..+++.  ..++.|++.++ +|||+++|+|+||||+||+++..+.         
T Consensus        80 ~~~I~e~~G~~~~tL~~~l~~-----~~~~e~--~~~~~~~L~~l~~yLh~~~IvhrDlKp~NILl~~~~~---------  143 (210)
T PRK10345         80 YDVIADFDGKPSITLTEFAEQ-----CRYEED--VAQLRQLLKKLKRYLLDNRIVTMELKPQNILCQRISE---------  143 (210)
T ss_pred             EEEEecCCCCcchhHHHHHHc-----ccccHh--HHHHHHHHHHHHHHHHHCCEeecCCCHHHEEEeccCC---------
Confidence            4 78999  557999999965     245555  34577888777 9999999999999999999985332         


Q ss_pred             CCCcccCCeEEeecC
Q 018699          198 SGPWQDQGLCLVDWG  212 (351)
Q Consensus       198 ~~~~~~~~~~l~Dfg  212 (351)
                          .+..++|+|++
T Consensus       144 ----~~~~~~LiDg~  154 (210)
T PRK10345        144 ----SEVIPVVCDNI  154 (210)
T ss_pred             ----CCCcEEEEECC
Confidence                34579999954

>PRK14879 serine/threonine protein kinase; Provisional

Probab=99.69  E-value=5e-16  Score=132.14  Aligned_cols=133  Identities=21%  Similarity=0.289  Sum_probs=95.1

Q ss_pred             EEeeccCceEEEEEEecCCCCceEEEEecCCCCCh--HHH------HHHHHHhhhccccccccccceeeecccCeeEEEE
Q 018699           54 GCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFPW--EFY------MYRQLDQRISGRERSSFGFAHRIHLYSDYSILVC  125 (351)
Q Consensus        54 ~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~~~--e~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~  125 (351)
                      +.||+|++|.||+|.+   .|..|++|+.......  +..      ........+....+.++..+..+....+..+++|
T Consensus         2 ~~l~~G~~~~vy~~~~---~~~~~~vK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~lv~   78 (211)
T PRK14879          2 KLIKRGAEAEIYLGDF---LGIKAVIKWRIPKRYRHPELDERIRRERTRREARIMSRARKAGVNVPAVYFVDPENFIIVM   78 (211)
T ss_pred             cccccCceEEEEEEee---CCCceEEEEeCCcCCcChHHHHHHHHHHHHHHHHHHHHHHHCCCCCCeEEEEeCCCCEEEE
Confidence            5789999999999984   4667899976543211  100      0111111122223334555555554566778999


Q ss_pred             EecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeeccCCCCCcccCC
Q 018699          126 DYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSGPWQDQG  205 (351)
Q Consensus       126 e~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~~~~~~~~~~  205 (351)
                      ||++|++|.+++...    ..    ....++.+++.++.++|+.|++|+|++|.||+++                  .+.
T Consensus        79 e~~~G~~L~~~~~~~----~~----~~~~i~~~i~~~l~~lH~~~i~H~Dl~p~Nil~~------------------~~~  132 (211)
T PRK14879         79 EYIEGEPLKDLINSN----GM----EELELSREIGRLVGKLHSAGIIHGDLTTSNMILS------------------GGK  132 (211)
T ss_pred             EEeCCcCHHHHHHhc----cH----HHHHHHHHHHHHHHHHHhCCcccCCCCcccEEEE------------------CCC
Confidence            999999999998652    21    7788899999999999999999999999999998                  234


Q ss_pred             eEEeecCCcc
Q 018699          206 LCLVDWGRGI  215 (351)
Q Consensus       206 ~~l~Dfg~a~  215 (351)
                      ++|+|||.+.
T Consensus       133 ~~liDf~~a~  142 (211)
T PRK14879        133 IYLIDFGLAE  142 (211)
T ss_pred             EEEEECCccc
Confidence            8899999874

>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]

Probab=99.67  E-value=3.8e-18  Score=164.55  Aligned_cols=258  Identities=17%  Similarity=0.187  Sum_probs=189.3

Q ss_pred             CeeEEEEEEeeccCceEEEEEEecCCCCceEEEEecCCCCChHHHHHHHHH----hhhccccccccccceeeecccCeeE
Q 018699           47 GKKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFPWEFYMYRQLD----QRISGRERSSFGFAHRIHLYSDYSI  122 (351)
Q Consensus        47 ~~~Y~i~~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~~~e~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~  122 (351)
                      ...|.+.+.||.|+++.|-.+.....+...+|.|.+......+ .....+.    .......|.+..............+
T Consensus        19 ~~~~~~~~~ig~gs~~~~~~~~~~~~~~~~~a~~~~s~~~~~~-~~~~~i~~e~~~~~~~s~h~n~~~~~~~~~~~~~~~   97 (601)
T KOG0590|consen   19 NSQYKLSRSIGKGSFSSSALASNSRDPESSSATKPISIPPKSE-DSSEHIDTETDIQKKLSKHSNTVHMIEPSSSPRSYL   97 (601)
T ss_pred             cccccccccccccccchhhhhhhcCCCcceeeccCCCCCCCcc-chhhhcCccccccccccccccccccCCccCCCcccc
Confidence            4578999999999999999998555666777888766443111 1111111    1111122556666666667788889


Q ss_pred             EEEEecCCCCHHHHH-HHHHhhCC-ChhHHHHHHHHHHHHHHHHHHH-HCCceecCCCCCcEEEeecCCcceeeccCCCC
Q 018699          123 LVCDYLSQGTLQDAI-NSYVVIGK-SMEEVLCIYYTIEMLCILESLH-DVGIIHGDFKPDNLLIRYARDELTVLDHDRSG  199 (351)
Q Consensus       123 lv~e~~~~~sL~~~l-~~~~~~~~-~l~~~~~~~i~~qi~~~l~~LH-~~~i~H~dl~p~Nill~~~~~~~~~~~~~~~~  199 (351)
                      +++++..|+++.+-+ ..    +. ..+...+..++.|+..++.|+| ..++.|+|++|+|.+++               
T Consensus        98 ~~~~~s~g~~~f~~i~~~----~~~~~~~~~~~~~~~ql~s~l~~~H~~~~~~h~~ikP~n~~l~---------------  158 (601)
T KOG0590|consen   98 LSLSYSDGGSLFSKISHP----DSTGTSSSSASRYLPQLNSGLSYLHPENGVTHRDIKPSNSLLD---------------  158 (601)
T ss_pred             cccCcccccccccccccC----CccCCCCcchhhhhhhhccCccccCcccccccCCCCCccchhc---------------
Confidence            999999999998887 33    33 5677788889999999999999 99999999999999999               


Q ss_pred             CcccC-CeEEeecCCcccccc-CCCCcccccccc-CCCcccceeccCCCC-CccchHhHHHHHHHHHHhCccccccccCC
Q 018699          200 PWQDQ-GLCLVDWGRGIDLHL-FPDNMEFEGDCR-TSGFRCIEMQEKKPW-KFQVDTYGLCAIVHMMLHNSYMEIEKKAS  275 (351)
Q Consensus       200 ~~~~~-~~~l~Dfg~a~~~~~-~~~~~~~~~~~g-~~~y~aPE~~~~~~~-~~~~DiwslG~il~~l~~g~~p~~~~~~~  275 (351)
                        ..+ .+++.|||+|..... ..........+| ++.|+|||...+..+ ....|+||+|+++.-+++|..|+......
T Consensus       159 --~s~~~l~~~df~~At~~~~~~g~~~~~~~~~g~s~~y~a~E~~~~~~~~~~~~d~~S~g~~l~~~~~g~~p~~~~~~~  236 (601)
T KOG0590|consen  159 --ESGSALKIADFGLATAYRNKNGAERSLKDRCGSSPPYGAPEHLSGKAYRGPSVDVWSLGIVLSAMLTGELPWDFPSRK  236 (601)
T ss_pred             --cCCCcccCCCchhhccccccCCcceeeecccCCCCCCCCcccccchhhcCCCcccccccccccccccCCCCccccccc
Confidence              556 799999999976554 233344556678 999999999988544 58899999999999999999998766554


Q ss_pred             CCCceeeecCcc--hhhhhHH--HHHHHHHHHHhcCCCCCChHHHHHHHHHHHHH
Q 018699          276 PDGGLVYLPKLS--FKRYWKV--ELWKSLFTNLLNMSSGNDKEVLQNLQKSFQDY  326 (351)
Q Consensus       276 ~~~~~~~~~~~~--~~~~~~~--~~~~~li~~~L~~dP~~R~s~~e~l~~~~~~~  326 (351)
                      ......+.....  ....|..  ....+++.++|..+|..|.+..++-.++|...
T Consensus       237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~k~l~~~~~~r~s~~~~~~d~~~~~  291 (601)
T KOG0590|consen  237 DGRYSSWKSNKGRFTQLPWNSISDQAHDLLHKILKENPSNRLSIEELKLDNWLSS  291 (601)
T ss_pred             cccceeecccccccccCccccCChhhhhcccccccCCchhccccccccccccccc
Confidence            322122211110  1111221  67789999999999999999999988876443

>cd05144 RIO2_C RIO kinase family; RIO2, C-terminal catalytic domain

Probab=99.66  E-value=3.5e-16  Score=131.75  Aligned_cols=137  Identities=19%  Similarity=0.187  Sum_probs=93.8

Q ss_pred             eeEEEEEEeeccCceEEEEEEecCCCCceEEEEecCCCCChHH-----------------------HHHHHHHhhhcccc
Q 018699           48 KKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFPWEF-----------------------YMYRQLDQRISGRE  104 (351)
Q Consensus        48 ~~Y~i~~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~~~e~-----------------------~~~~~~~~~~~~~~  104 (351)
                      ..|.+.+.||.|++|.||+|.+  .+|+.||||++..+.....                       ....++. .+....
T Consensus        15 ~~~~~~~~i~~G~~g~Vy~~~~--~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~-~l~~l~   91 (198)
T cd05144          15 VVESLGNQIGVGKESDVYLALD--PDGNPVALKFHRLGRTSFRKVKRKRDYLGDRKHASWLYLSRLAAQKEFA-ALKALY   91 (198)
T ss_pred             chhhcCCccccCcceEEEEEEc--CCCCEEEEEEEecccchhhhhcchHHHHhccccchhHHHhHHHHHHHHH-HHHHHH
Confidence            3488899999999999999984  3689999998664321000                       0000010 011111


Q ss_pred             ccccccceeeecccCeeEEEEEecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEe
Q 018699          105 RSSFGFAHRIHLYSDYSILVCDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIR  184 (351)
Q Consensus       105 ~~~~~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~  184 (351)
                      +.++..+..+  .....++||||++|++|......          .....++.+++.++.++|+.||+|+||+|+||+++
T Consensus        92 ~~~i~v~~~~--~~~~~~lv~e~~~g~~L~~~~~~----------~~~~~~~~~i~~~l~~lh~~gi~H~Dl~p~Nill~  159 (198)
T cd05144          92 EEGFPVPKPI--DWNRHAVVMEYIDGVELYRVRVL----------EDPEEVLDEILEEIVKAYKHGIIHGDLSEFNILVD  159 (198)
T ss_pred             HcCCCCCcee--ecCCceEEEEEeCCcchhhcccc----------ccHHHHHHHHHHHHHHHHHCCCCcCCCCcccEEEc
Confidence            1111111111  13455899999999998765321          23456788999999999999999999999999998


Q ss_pred             ecCCcceeeccCCCCCcccCCeEEeecCCccc
Q 018699          185 YARDELTVLDHDRSGPWQDQGLCLVDWGRGID  216 (351)
Q Consensus       185 ~~~~~~~~~~~~~~~~~~~~~~~l~Dfg~a~~  216 (351)
                                       .++.++|+|||++..
T Consensus       160 -----------------~~~~~~liDfg~~~~  174 (198)
T cd05144         160 -----------------DDEKIYIIDWPQMVS  174 (198)
T ss_pred             -----------------CCCcEEEEECCcccc
Confidence                             667799999998854

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO2 is present in archaea and eukaryotes. It contains an N-terminal winged helix (wHTH) domain and a C-terminal RIO kinase catalytic domain. The wHTH domain is primarily seen in DNA-binding proteins, although some wHTH dom

>TIGR03724 arch_bud32 Kae1-associated kinase Bud32

Probab=99.66  E-value=1.2e-15  Score=128.51  Aligned_cols=130  Identities=22%  Similarity=0.328  Sum_probs=89.3

Q ss_pred             EeeccCceEEEEEEecCCCCceEEEEecCCCC-Ch-HH------HHHHHHHhhhccccccccccceeeecccCeeEEEEE
Q 018699           55 CAGQGGFAKVFKAYVNGDPEDVVALKIQKPAF-PW-EF------YMYRQLDQRISGRERSSFGFAHRIHLYSDYSILVCD  126 (351)
Q Consensus        55 ~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~-~~-e~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e  126 (351)
                      .||+|++|+||+|.+   .+..|++|...... .. +.      .........+....+.++..+..+....+..++|||
T Consensus         1 ~ig~G~~~~vy~~~~---~~~~~viK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~lv~e   77 (199)
T TIGR03724         1 LIAKGAEAIIYLGDF---LGLKAVIKERVPKSYRHPELDERIRRERTRNEARLLSRARKAGVNTPVVYDVDPDNKTIVME   77 (199)
T ss_pred             CCCCCceEEEEEeec---CCccEEEEEecCCcCcCchHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCEEEEE
Confidence            389999999999984   35779999854321 11 10      101111111112222233344444445666789999


Q ss_pred             ecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeeccCCCCCcccCCe
Q 018699          127 YLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSGPWQDQGL  206 (351)
Q Consensus       127 ~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~~~~~~~~~~~  206 (351)
                      |++|++|.+.+...    ..       .++.+++.++.+||+.|++|+|++|.||+++                  ++.+
T Consensus        78 ~~~g~~l~~~~~~~----~~-------~~~~~i~~~l~~lH~~gi~H~Dl~~~Nil~~------------------~~~~  128 (199)
T TIGR03724        78 YIEGKPLKDVIEEG----ND-------ELLREIGRLVGKLHKAGIVHGDLTTSNIIVR------------------DDKL  128 (199)
T ss_pred             EECCccHHHHHhhc----HH-------HHHHHHHHHHHHHHHCCeecCCCCcceEEEE------------------CCcE
Confidence            99999999887652    11       6789999999999999999999999999998                  2348


Q ss_pred             EEeecCCccc
Q 018699          207 CLVDWGRGID  216 (351)
Q Consensus       207 ~l~Dfg~a~~  216 (351)
                      +++|||++..
T Consensus       129 ~liDfg~a~~  138 (199)
T TIGR03724       129 YLIDFGLGKY  138 (199)
T ss_pred             EEEECCCCcC
Confidence            9999998753

Members of this protein family are the Bud32 protein associated with Kae1 (kinase-associated endopeptidase 1) in the Archaea. In many Archaeal genomes, Kae1 and Bud32 are fused. The complex is homologous to the Kae1 and Bud32 subunits of the eukaryotic KEOPS complex, an apparently ancient protein kinase-containing molecular machine.

>cd05119 RIO RIO kinase family, catalytic domain

Probab=99.62  E-value=2.4e-15  Score=125.41  Aligned_cols=136  Identities=19%  Similarity=0.255  Sum_probs=86.7

Q ss_pred             EEEeeccCceEEEEEEecCCCCceEEEEecCCCCChHHHHHHH-----------------------HHhh-hcccccccc
Q 018699           53 KGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFPWEFYMYRQ-----------------------LDQR-ISGRERSSF  108 (351)
Q Consensus        53 ~~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~~~e~~~~~~-----------------------~~~~-~~~~~~~~~  108 (351)
                      .+.||+|++|+||+|.+ . +++.||||++.+...........                       .... ........+
T Consensus         2 ~~~lg~G~~g~Vy~a~~-~-~~~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~   79 (187)
T cd05119           2 GGPIGTGKEADVYLALD-G-DGEPVAVKIYRTGRTSFKKRKRYRTGDYRFGRKKSNWRYLSRLWAEKEFRNLKRLYEAGV   79 (187)
T ss_pred             CcccccccceeEEEEEC-C-CCCEEEEEEEecCccchhhhhhhhHHHHHhccCCcchhhhhhHHHHHHHHHHHHHHHcCC
Confidence            46899999999999994 4 78999999977543211111000                       0000 000000111


Q ss_pred             ccceeeecccCeeEEEEEecCCCCHHH-HHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHH-CCceecCCCCCcEEEeec
Q 018699          109 GFAHRIHLYSDYSILVCDYLSQGTLQD-AINSYVVIGKSMEEVLCIYYTIEMLCILESLHD-VGIIHGDFKPDNLLIRYA  186 (351)
Q Consensus       109 ~~~~~~~~~~~~~~lv~e~~~~~sL~~-~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~-~~i~H~dl~p~Nill~~~  186 (351)
                      ..+..+.  ....++||||++++++.. .+...     .. ...+..++.+++.++.++|. .||+|+||+|+||+++  
T Consensus        80 ~~~~~~~--~~~~~lv~e~~~g~~~~~~~l~~~-----~~-~~~~~~~~~~~~~~l~~lh~~~~ivH~Dl~p~Nili~--  149 (187)
T cd05119          80 PVPKPID--LNRHVLVMEFIGGDGIPAPRLKDV-----RL-LEDPEELYDQILELMRKLYREAGLVHGDLSEYNILVD--  149 (187)
T ss_pred             CCCceEe--cCCCEEEEEEeCCCCccChhhhhh-----hh-cccHHHHHHHHHHHHHHHhhccCcCcCCCChhhEEEE--
Confidence            1111111  134589999998854332 22221     11 15678889999999999999 9999999999999998  


Q ss_pred             CCcceeeccCCCCCcccCCeEEeecCCccc
Q 018699          187 RDELTVLDHDRSGPWQDQGLCLVDWGRGID  216 (351)
Q Consensus       187 ~~~~~~~~~~~~~~~~~~~~~l~Dfg~a~~  216 (351)
                                      ++.++|+|||.+..
T Consensus       150 ----------------~~~~~liDfg~a~~  163 (187)
T cd05119         150 ----------------DGKVYIIDVPQAVE  163 (187)
T ss_pred             ----------------CCcEEEEECccccc
Confidence                            23489999998854

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases present in archaea, bacteria and eukaryotes. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. RIO kinases contain a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. Most organisms contain at least two RIO kinases, RIO1 and RIO2. A third protein, RIO3, is present in multicellular eukaryotes. In yeast, RIO1 and RIO2 are essential for survival. They funct

>KOG1266 consensus Protein kinase [Signal transduction mechanisms]

Probab=99.61  E-value=8.5e-16  Score=132.07  Aligned_cols=209  Identities=15%  Similarity=0.128  Sum_probs=144.4

Q ss_pred             HHHHHHHhhhccccccccccceeeecc-----cCeeEEEEEecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHH
Q 018699           91 YMYRQLDQRISGRERSSFGFAHRIHLY-----SDYSILVCDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILES  165 (351)
Q Consensus        91 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~lv~e~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~  165 (351)
                      +..+.+-+.+....|.+++.+|.++..     .....+++||++.|++..++++..+++..+......+|+.||+.||.|
T Consensus       112 ek~~~vFdnllqlvHsnlvkfH~yw~d~K~~e~~rviFiteymssgs~~~fLkrt~~~~~a~~~~~wkkw~tqIlsal~y  191 (458)
T KOG1266|consen  112 EKRRAVFDNLLQLVHSNLVKFHKYWTDKKYEEKPRVIFITEYMSSGSLKQFLKRTKKNQKALFQKAWKKWCTQILSALSY  191 (458)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHhhcccccccccceEEEEecccchhHHHHHHHHHHhhhhhhHHHHHHHHHHHHhhhhh
Confidence            344445555566667777777777654     345789999999999999999988888899999999999999999999


Q ss_pred             HHHC--CceecCCCCCcEEEeecCCcceeeccCCCCCcccCCeEEeecCCccccccCCCC-----ccccccccCCCcccc
Q 018699          166 LHDV--GIIHGDFKPDNLLIRYARDELTVLDHDRSGPWQDQGLCLVDWGRGIDLHLFPDN-----MEFEGDCRTSGFRCI  238 (351)
Q Consensus       166 LH~~--~i~H~dl~p~Nill~~~~~~~~~~~~~~~~~~~~~~~~l~Dfg~a~~~~~~~~~-----~~~~~~~g~~~y~aP  238 (351)
                      ||+-  .|+|+++..+.|++.                 .++.+|+   |+.......+..     .......+-++|.+|
T Consensus       192 Lhs~~PpiihgnlTc~tifiq-----------------~ngLIki---g~~ap~s~h~s~~~~~~~Ek~~~~~~~g~~a~  251 (458)
T KOG1266|consen  192 LHSCDPPIIHGNLTCDTIFIQ-----------------HNGLIKI---GSVAPDSTHPSVNSTREAEKSVNTSLPGFSAP  251 (458)
T ss_pred             hhccCCccccCCcchhheeec-----------------CCceEEe---cccCccccchhhhhhhHhhhhccccCCccccC
Confidence            9987  699999999999999                 4555554   332211111100     011222356789999


Q ss_pred             eeccCCCCCccchHhHHHHHHHHHHhCccccccccCC-CCCceeeecCcchhhhhHHHHHHHHHHHHhcCCCCCChHHHH
Q 018699          239 EMQEKKPWKFQVDTYGLCAIVHMMLHNSYMEIEKKAS-PDGGLVYLPKLSFKRYWKVELWKSLFTNLLNMSSGNDKEVLQ  317 (351)
Q Consensus       239 E~~~~~~~~~~~DiwslG~il~~l~~g~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~e  317 (351)
                      |.=....-+.++|||++|.+..+|..|..--...... .............    .+..-+++|.+||+..|+.||++.+
T Consensus       252 ~sg~~tn~~~a~dIy~fgmcAlemailEiq~tnseS~~~~ee~ia~~i~~l----en~lqr~~i~kcl~~eP~~rp~ar~  327 (458)
T KOG1266|consen  252 ESGTTTNTTGASDIYKFGMCALEMAILEIQSTNSESKVEVEENIANVIIGL----ENGLQRGSITKCLEGEPNGRPDARL  327 (458)
T ss_pred             CcCcccccccchhhhhhhHHHHHHHHheeccCCCcceeehhhhhhhheeec----cCccccCcCcccccCCCCCCcchhh
Confidence            8754445568899999999999999875432111110 0000000011111    1133478999999999999999999


Q ss_pred             HHHHHH
Q 018699          318 NLQKSF  323 (351)
Q Consensus       318 ~l~~~~  323 (351)
                      ++.||+
T Consensus       328 llfHpl  333 (458)
T KOG1266|consen  328 LLFHPL  333 (458)
T ss_pred             hhcCce
Confidence            999985

>PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated

Probab=99.60  E-value=1.1e-14  Score=140.64  Aligned_cols=136  Identities=21%  Similarity=0.299  Sum_probs=92.0

Q ss_pred             eeEEEEEEeeccCceEEEEEEecCCCCceEEEEec-CCCCCh-H------HHHHHHHHhhhccccccccccceeeecccC
Q 018699           48 KKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQ-KPAFPW-E------FYMYRQLDQRISGRERSSFGFAHRIHLYSD  119 (351)
Q Consensus        48 ~~Y~i~~~lg~G~~g~V~~a~~~~~~~~~vaiK~~-~~~~~~-e------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  119 (351)
                      ..|...+.||+|+||+||+|.+. .  +.+++|+. .+.... +      ..........+....++++..+..+.....
T Consensus       333 ~~~~~~~~iG~G~~g~Vy~~~~~-~--~~~v~k~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~  409 (535)
T PRK09605        333 RRKIPDHLIGKGAEADIKKGEYL-G--RDAVIKERVPKGYRHPELDERLRTERTRAEARLLSEARRAGVPTPVIYDVDPE  409 (535)
T ss_pred             cccCccceeccCCcEEEEEEeec-C--ccceeEEEecccccchhHHHHHHHHHHHHHHHHHHhhcccCCCeeEEEEEeCC
Confidence            34566899999999999999853 2  23444432 221110 0      011111111222333444544444455556


Q ss_pred             eeEEEEEecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeeccCCCC
Q 018699          120 YSILVCDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSG  199 (351)
Q Consensus       120 ~~~lv~e~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~~~~  199 (351)
                      ..++||||++|++|.+++..            ...++.+++.++.+||+.|++|||+||+||+++               
T Consensus       410 ~~~lv~E~~~g~~L~~~l~~------------~~~~~~~i~~~L~~lH~~giiHrDlkp~NILl~---------------  462 (535)
T PRK09605        410 EKTIVMEYIGGKDLKDVLEG------------NPELVRKVGEIVAKLHKAGIVHGDLTTSNFIVR---------------  462 (535)
T ss_pred             CCEEEEEecCCCcHHHHHHH------------HHHHHHHHHHHHHHHHhCCCccCCCChHHEEEE---------------
Confidence            77899999999999988752            356789999999999999999999999999995               


Q ss_pred             CcccCCeEEeecCCccc
Q 018699          200 PWQDQGLCLVDWGRGID  216 (351)
Q Consensus       200 ~~~~~~~~l~Dfg~a~~  216 (351)
                         ++.++|+|||++..
T Consensus       463 ---~~~~~liDFGla~~  476 (535)
T PRK09605        463 ---DDRLYLIDFGLGKY  476 (535)
T ss_pred             ---CCcEEEEeCccccc
Confidence               23589999998853

>PRK01723 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed

Probab=99.53  E-value=2.1e-13  Score=117.80  Aligned_cols=133  Identities=14%  Similarity=0.221  Sum_probs=84.9

Q ss_pred             EEee-ccCceEEEEEEecCCCCceEEEEecCCC----------CC---h-HHHHHHHHHhhhcccccccc--ccceeeec
Q 018699           54 GCAG-QGGFAKVFKAYVNGDPEDVVALKIQKPA----------FP---W-EFYMYRQLDQRISGRERSSF--GFAHRIHL  116 (351)
Q Consensus        54 ~~lg-~G~~g~V~~a~~~~~~~~~vaiK~~~~~----------~~---~-e~~~~~~~~~~~~~~~~~~~--~~~~~~~~  116 (351)
                      ..|| .|+.|+||.+..   .+..+++|.+...          ..   . .....+++. ......+.++  +.+.....
T Consensus        37 ~~lg~~~g~gtv~~v~~---~~~~~vlk~~~r~~~i~kv~~~~~~~~~~~~~r~~rE~~-ll~~L~~~gi~vP~pl~~~~  112 (239)
T PRK01723         37 RVVGSAKGRGTTWFVQT---PGVNWVLRHYRRGGLIGKLSKDRYLFTGLERTRAFAEFR-LLAQLYEAGLPVPRPIAARV  112 (239)
T ss_pred             ceeecCCCCccEEEEEe---CCceEEEEEeeEcchHHhhhhhcccccchhhhHHHHHHH-HHHHHHhCCCCCceeEeeee
Confidence            4566 788899999883   2567888876431          10   0 011111111 1111122222  22222211


Q ss_pred             c-cC---eeEEEEEecCC-CCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcce
Q 018699          117 Y-SD---YSILVCDYLSQ-GTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELT  191 (351)
Q Consensus       117 ~-~~---~~~lv~e~~~~-~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~  191 (351)
                      . ..   ..++|||+++| .+|.+++..     ..+++..    +.+++.++.+||++||+|+||+|.||+++       
T Consensus       113 ~~~~~~~~~~lV~e~l~G~~~L~~~l~~-----~~l~~~~----~~~i~~~l~~lH~~GI~HrDlkp~NILv~-------  176 (239)
T PRK01723        113 VRHGLFYRADILIERIEGARDLVALLQE-----APLSEEQ----WQAIGQLIARFHDAGVYHADLNAHNILLD-------  176 (239)
T ss_pred             eecCcceeeeEEEEecCCCCCHHHHHhc-----CCCCHHH----HHHHHHHHHHHHHCCCCCCCCCchhEEEc-------
Confidence            1 12   23599999987 689988764     3455443    56899999999999999999999999998       


Q ss_pred             eeccCCCCCcccCCeEEeecCCccc
Q 018699          192 VLDHDRSGPWQDQGLCLVDWGRGID  216 (351)
Q Consensus       192 ~~~~~~~~~~~~~~~~l~Dfg~a~~  216 (351)
                                .++.++|+|||.+..
T Consensus       177 ----------~~~~v~LIDfg~~~~  191 (239)
T PRK01723        177 ----------PDGKFWLIDFDRGEL  191 (239)
T ss_pred             ----------CCCCEEEEECCCccc
Confidence                      556799999998753

>cd05120 APH_ChoK_like Aminoglycoside 3'-phosphotransferase (APH) and Choline Kinase (ChoK) family

Probab=99.49  E-value=2.5e-13  Score=108.71  Aligned_cols=128  Identities=19%  Similarity=0.236  Sum_probs=92.1

Q ss_pred             EEEEeeccCceEEEEEEecCCCCceEEEEecCCCCC-----hHHHHHHHHHhhhccccccccccceeeecccCeeEEEEE
Q 018699           52 IKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFP-----WEFYMYRQLDQRISGRERSSFGFAHRIHLYSDYSILVCD  126 (351)
Q Consensus        52 i~~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~~-----~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e  126 (351)
                      +++.||.|.++.||++..+   +..+++|.......     .|...++.+.+.     ...++.+.......+..+++||
T Consensus         2 ~~~~i~~g~~~~v~~~~~~---~~~~~iK~~~~~~~~~~~~~e~~~~~~l~~~-----~~~~p~~~~~~~~~~~~~~v~e   73 (155)
T cd05120           2 SIKLLKGGLTNRVYLLGTK---DEDYVLKINPSREKGADREREVAILQLLARK-----GLPVPKVLASGESDGWSYLLME   73 (155)
T ss_pred             cceecccccccceEEEEec---CCeEEEEecCCCCchhHHHHHHHHHHHHHHc-----CCCCCeEEEEcCCCCccEEEEE
Confidence            4678999999999999942   26789999876542     233333333321     1233444444444567899999


Q ss_pred             ecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHC---CceecCCCCCcEEEeecCCcceeeccCCCCCccc
Q 018699          127 YLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDV---GIIHGDFKPDNLLIRYARDELTVLDHDRSGPWQD  203 (351)
Q Consensus       127 ~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~---~i~H~dl~p~Nill~~~~~~~~~~~~~~~~~~~~  203 (351)
                      |+.++.+..+           +......++.+++.+++.+|..   +++|+|++|+||+++                 ..
T Consensus        74 ~~~g~~~~~~-----------~~~~~~~~~~~~~~~l~~lh~~~~~~i~H~Dl~~~Nil~~-----------------~~  125 (155)
T cd05120          74 WIEGETLDEV-----------SEEEKEDIAEQLAELLAKLHQLPLLVLCHGDLHPGNILVD-----------------DG  125 (155)
T ss_pred             ecCCeecccC-----------CHHHHHHHHHHHHHHHHHHhCCCceEEEecCCCcceEEEE-----------------CC
Confidence            9988766543           2344456788999999999985   799999999999999                 55


Q ss_pred             CCeEEeecCCcc
Q 018699          204 QGLCLVDWGRGI  215 (351)
Q Consensus       204 ~~~~l~Dfg~a~  215 (351)
                      +.++++|||.+.
T Consensus       126 ~~~~l~Df~~~~  137 (155)
T cd05120         126 KILGIIDWEYAG  137 (155)
T ss_pred             cEEEEEeccccc
Confidence            669999999774

The APH/ChoK family is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). The family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides and macrolides, leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves

>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]

Probab=99.47  E-value=7e-14  Score=129.70  Aligned_cols=255  Identities=17%  Similarity=0.111  Sum_probs=181.2

Q ss_pred             EcCeeEEEEEEeec--cCceEEEEEEe-cCCCCceEEEEecCCCCCh---HHHHHHHHHhhhccccccccccceeeeccc
Q 018699           45 IGGKKYQIKGCAGQ--GGFAKVFKAYV-NGDPEDVVALKIQKPAFPW---EFYMYRQLDQRISGRERSSFGFAHRIHLYS  118 (351)
Q Consensus        45 i~~~~Y~i~~~lg~--G~~g~V~~a~~-~~~~~~~vaiK~~~~~~~~---e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  118 (351)
                      .....+.+.+.+|.  |.+|.||.+.. ....+..+|+|.-+.....   .....+..........+.+.+..+.....+
T Consensus       111 ~~~~~~~~~~~~g~~~g~~~s~~~~~~~~~~s~~~~a~k~s~~p~s~p~~~~~k~~~~~s~~~i~~~~~~v~~~~~~e~~  190 (524)
T KOG0601|consen  111 FFDQRFPISSRTGSLPGSKGSVFKSRCTNSESPHKFAVKKSKIPFSPPLDSKRKLREFLSHHKIDSHENPVRDSPAWEGS  190 (524)
T ss_pred             hhhhhcccccccccCCCCCceeecccCCcccCCcccccccccCCCCCccccccccchhhcccccCccccccccCcccccC
Confidence            33467888999999  99999999984 1566788999985544332   222333333333344455555556666778


Q ss_pred             CeeEEEEEecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHH----HHHHHHHCCceecCCCCCcEEEeecCCcceeec
Q 018699          119 DYSILVCDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLC----ILESLHDVGIIHGDFKPDNLLIRYARDELTVLD  194 (351)
Q Consensus       119 ~~~~lv~e~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~----~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~  194 (351)
                      +..|+=+|++ +.+|.++....   +..+++..++....+...    |+.++|+.+++|-|++|+||++.          
T Consensus       191 ~~lfiqtE~~-~~sl~~~~~~~---~~~~p~~~l~~~~~~~~~~~~~al~~~hs~~~~~~~~kp~~i~~~----------  256 (524)
T KOG0601|consen  191 GILFIQTELC-GESLQSYCHTP---CNFLPDNLLWNSLRDWLSRDVTALSHLHSNNIVHDDLKPANIFTT----------  256 (524)
T ss_pred             Ccceeeeccc-cchhHHhhhcc---cccCCchhhhhHHhhhhhcccccccccCCCcccccccchhheecc----------
Confidence            8899999999 77888877653   456899999999999999    99999999999999999999999          


Q ss_pred             cCCCCCccc-CCeEEeecCCccccccCCCCcc---ccccccCCCcccceeccCCCCCccchHhHHHHHHHHHHhCccccc
Q 018699          195 HDRSGPWQD-QGLCLVDWGRGIDLHLFPDNME---FEGDCRTSGFRCIEMQEKKPWKFQVDTYGLCAIVHMMLHNSYMEI  270 (351)
Q Consensus       195 ~~~~~~~~~-~~~~l~Dfg~a~~~~~~~~~~~---~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~p~~  270 (351)
                             .+ ...+++|||....+....-...   .....|...|++||...+. +++..|||+||.++.+..++..++.
T Consensus       257 -------~~~~s~~~~df~~v~~i~~~~~~~~~~~~~r~~~~~~Y~~ke~~~~l-~~~~~di~sl~ev~l~~~l~~~~~~  328 (524)
T KOG0601|consen  257 -------SDWTSCKLTDFGLVSKISDGNFSSVFKVSKRPEGDCIYAAKELLNGL-ATFASDIFSLGEVILEAILGSHLPS  328 (524)
T ss_pred             -------cccceeecCCcceeEEccCCccccceeeeecCCCCceEeChhhhccc-cchHhhhcchhhhhHhhHhhccccc
Confidence                   55 6789999998876553321111   1122577889999987654 4889999999999999998876655


Q ss_pred             cccCCCCCce--eeecCcchhhhhHHHHHHHHHHHHhcCCCCCChHHHHHHHHHH
Q 018699          271 EKKASPDGGL--VYLPKLSFKRYWKVELWKSLFTNLLNMSSGNDKEVLQNLQKSF  323 (351)
Q Consensus       271 ~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~~~~  323 (351)
                      ..........  .+ .+..+-+..+ ..+...+..|++.+|..|+++..+..+.+
T Consensus       329 ~g~~~~W~~~r~~~-ip~e~~~~~s-~~l~~~~~~~~d~~~~~~~~~q~~~~l~~  381 (524)
T KOG0601|consen  329 VGKNSSWSQLRQGY-IPLEFCEGGS-SSLRSVTSQMLDEDPRLRLTAQILTALNV  381 (524)
T ss_pred             CCCCCCcccccccc-CchhhhcCcc-hhhhhHHHHhcCcchhhhhHHHHHhcccc
Confidence            4311111100  01 1112222222 45566999999999999999999998765

>TIGR01982 UbiB 2-polyprenylphenol 6-hydroxylase

Probab=99.45  E-value=8.6e-13  Score=123.69  Aligned_cols=140  Identities=15%  Similarity=0.206  Sum_probs=91.7

Q ss_pred             EEEeeccCceEEEEEEecCCCCceEEEEecCCCCChH----HHHHHHHHh------------------------------
Q 018699           53 KGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFPWE----FYMYRQLDQ------------------------------   98 (351)
Q Consensus        53 ~~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~~~e----~~~~~~~~~------------------------------   98 (351)
                      .+.||.|++|.||+|+.  .+|+.||||+..+.....    ...++.+..                              
T Consensus       122 ~~plasaSigQVh~A~l--~~G~~VaVKv~rp~i~~~i~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eld  199 (437)
T TIGR01982       122 EKPLAAASIAQVHRARL--VDGKEVAVKVLRPGIEKTIAADIALLYRLARIVERLSPDSRRLRPTEVVKEFEKTLRRELD  199 (437)
T ss_pred             CcceeeeehhheEEEEe--cCCCEEEEEeeCCCcHHHHHHHHHHHHHHHHHHHHhCccccccCHHHHHHHHHHHHHHHHC
Confidence            36799999999999995  468999999987653221    111111100                              


Q ss_pred             ---------hhc--cccccccccceeeecccCeeEEEEEecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHH-HHHHH
Q 018699           99 ---------RIS--GRERSSFGFAHRIHLYSDYSILVCDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLC-ILESL  166 (351)
Q Consensus        99 ---------~~~--~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~-~l~~L  166 (351)
                               ++.  ....+.+..+..+....+..++||||++|++|.+......   ....   ...++.+++. .+..+
T Consensus       200 f~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~~~~~~~~---~~~~---~~~ia~~~~~~~l~ql  273 (437)
T TIGR01982       200 LRREAANASELGENFKNDPGVYVPEVYWDRTSERVLTMEWIDGIPLSDIAALDE---AGLD---RKALAENLARSFLNQV  273 (437)
T ss_pred             HHHHHHHHHHHHHhcCCCCCEEeCCEehhhcCCceEEEEeECCcccccHHHHHh---cCCC---HHHHHHHHHHHHHHHH
Confidence                     000  0012222333333334556789999999999988765321   1121   2334555555 47889


Q ss_pred             HHCCceecCCCCCcEEEeecCCcceeeccCCCCCcccCCeEEeecCCcccc
Q 018699          167 HDVGIIHGDFKPDNLLIRYARDELTVLDHDRSGPWQDQGLCLVDWGRGIDL  217 (351)
Q Consensus       167 H~~~i~H~dl~p~Nill~~~~~~~~~~~~~~~~~~~~~~~~l~Dfg~a~~~  217 (351)
                      |..|++|+|++|.||+++                 .++.++++|||++...
T Consensus       274 ~~~g~~H~D~hPgNilv~-----------------~~g~i~liDfG~~~~l  307 (437)
T TIGR01982       274 LRDGFFHADLHPGNIFVL-----------------KDGKIIALDFGIVGRL  307 (437)
T ss_pred             HhCCceeCCCCcccEEEC-----------------CCCcEEEEeCCCeeEC
Confidence            999999999999999998                 6778999999988653

This model represents the enzyme (UbiB) which catalyzes the first hydroxylation step in the ubiquinone biosynthetic pathway in bacteria. It is believed that the reaction is 2-polyprenylphenol - 6-hydroxy-2-polyprenylphenol. This model finds hits primarily in the proteobacteria. The gene is also known as AarF in certain species.

>cd05146 RIO3_euk RIO kinase family; eukaryotic RIO3, catalytic domain

Probab=99.42  E-value=2.4e-12  Score=106.58  Aligned_cols=139  Identities=15%  Similarity=0.289  Sum_probs=88.6

Q ss_pred             EEEeeccCceEEEEEEecCC------CCceEEEEecCCCCC----------------------hHHHHHH----HHHhhh
Q 018699           53 KGCAGQGGFAKVFKAYVNGD------PEDVVALKIQKPAFP----------------------WEFYMYR----QLDQRI  100 (351)
Q Consensus        53 ~~~lg~G~~g~V~~a~~~~~------~~~~vaiK~~~~~~~----------------------~e~~~~~----~~~~~~  100 (351)
                      ...||.|..+.||.|.. ..      .+..+|||+++....                      +...+.+    ...+.+
T Consensus         2 ~g~i~~GKEa~V~~~~~-~~~~~~~~~~~~~avKi~r~~~~~Fk~~~~y~~~~~rf~~~~~k~~~~~~~~~wa~kE~r~L   80 (197)
T cd05146           2 NGCISTGKESVVLHANG-GSNETEQVIPTECAIKVFKTTLNEFKNRDKYIKDDYRFKDRFSKLNPRKIIRMWAEKEMHNL   80 (197)
T ss_pred             CCccccCcceEEEEEec-CcccccccCCceEEEEEEeccceeEcChhhhccCCcccccCcCCCCHHHHHHHHHHHHHHHH
Confidence            35789999999999983 32      357899999652100                      0011111    000111


Q ss_pred             ccccccccccceeeecccCeeEEEEEecCCCCHHH-HHHHHHhhCCChhHHHHHHHHHHHHHHHHHH-HHCCceecCCCC
Q 018699          101 SGRERSSFGFAHRIHLYSDYSILVCDYLSQGTLQD-AINSYVVIGKSMEEVLCIYYTIEMLCILESL-HDVGIIHGDFKP  178 (351)
Q Consensus       101 ~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~sL~~-~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~L-H~~~i~H~dl~p  178 (351)
                      ......++..+..+..  ...++||||+.+..+.. .+.     +..++...+..+..+++.++..| |..|++||||++
T Consensus        81 ~rl~~~Gv~vP~pi~~--~~~~lvME~Ig~~~~~~~~Lk-----d~~~~~~~~~~i~~~i~~~l~~l~H~~glVHGDLs~  153 (197)
T cd05146          81 KRMQKAGIPCPEVVVL--KKHVLVMSFIGDDQVPAPKLK-----DAKLNDEEMKNAYYQVLSMMKQLYKECNLVHADLSE  153 (197)
T ss_pred             HHHHHcCCCCCeEEEe--cCCEEEEEEcCCCCccchhhh-----ccccCHHHHHHHHHHHHHHHHHHHHhCCeecCCCCH
Confidence            1112223333333332  45689999996544432 222     23455566677889999999998 899999999999


Q ss_pred             CcEEEeecCCcceeeccCCCCCcccCCeEEeecCCcccc
Q 018699          179 DNLLIRYARDELTVLDHDRSGPWQDQGLCLVDWGRGIDL  217 (351)
Q Consensus       179 ~Nill~~~~~~~~~~~~~~~~~~~~~~~~l~Dfg~a~~~  217 (351)
                      .||+++                  ++.+.|+|||.+...
T Consensus       154 ~NIL~~------------------~~~v~iIDF~qav~~  174 (197)
T cd05146         154 YNMLWH------------------DGKVWFIDVSQSVEP  174 (197)
T ss_pred             HHEEEE------------------CCcEEEEECCCceeC
Confidence            999997                  245899999988653

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO3 is present only in multicellular eukaryotes. Its function is still unknown.

>PRK04750 ubiB putative ubiquinone biosynthesis protein UbiB; Reviewed

Probab=99.42  E-value=8.3e-12  Score=118.61  Aligned_cols=146  Identities=15%  Similarity=0.237  Sum_probs=91.2

Q ss_pred             eeEEEEEEeeccCceEEEEEEecCCCCceEEEEecCCCCChH----HH--------------------------------
Q 018699           48 KKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFPWE----FY--------------------------------   91 (351)
Q Consensus        48 ~~Y~i~~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~~~e----~~--------------------------------   91 (351)
                      ..|+. +.||+|++|.||+|+. ..+|+.||||+..+.....    ..                                
T Consensus       120 ~~fd~-~PlasaSiaQVh~A~l-~~~G~~VAVKV~rP~i~~~I~~Dl~~l~~~a~~l~~~~~~~~~l~~~~~v~e~~~~l  197 (537)
T PRK04750        120 DDFDI-KPLASASIAQVHFARL-KDNGREVVVKVLRPDILPVIDADLALMYRLARWVERLLPDGRRLKPREVVAEFEKTL  197 (537)
T ss_pred             HhcCh-hhhcCCCccEEEEEEE-CCCCCEEEEEEeCcchHHHHHHHHHHHHHHHHHHHHhCcccccCCHHHHHHHHHHHH
Confidence            35666 7999999999999995 4568999999987653211    00                                


Q ss_pred             -----HHHHHHh--hhcc--ccccccccceeeecccCeeEEEEEecCCCCHHHHHHHHHhhCC---ChhHHHHHHHHHHH
Q 018699           92 -----MYRQLDQ--RISG--RERSSFGFAHRIHLYSDYSILVCDYLSQGTLQDAINSYVVIGK---SMEEVLCIYYTIEM  159 (351)
Q Consensus        92 -----~~~~~~~--~~~~--~~~~~~~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~~~~---~l~~~~~~~i~~qi  159 (351)
                           ..++...  ....  ...+.+..+..+.......++||||+.|+.+.+.-.-. ..+.   .+.+..+..++.|+
T Consensus       198 ~~ElD~~~Ea~N~~~~~~~f~~~~~v~VP~v~~d~st~~VLvmE~i~G~~l~d~~~l~-~~g~d~~~la~~~v~~~~~Qi  276 (537)
T PRK04750        198 HDELDLMREAANASQLRRNFEDSDMLYVPEVYWDYCSETVMVMERMYGIPVSDVAALR-AAGTDMKLLAERGVEVFFTQV  276 (537)
T ss_pred             HHhhCHHHHHHHHHHHHHHccCCCCeecceeecccCCCceEEEeeecCccHHhHHHHH-hcCCCHHHHHHHHHHHHHHHH
Confidence                 0000000  0000  01112222233334456678999999999998742211 0021   35555566666665


Q ss_pred             HHHHHHHHHCCceecCCCCCcEEEeecCCcceeeccCCCCCcccCCeEEeecCCccc
Q 018699          160 LCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSGPWQDQGLCLVDWGRGID  216 (351)
Q Consensus       160 ~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~~~~~~~~~~~~l~Dfg~a~~  216 (351)
                      +       ..|++|+|++|.||+++.++.             ..+.++++|||++..
T Consensus       277 f-------~~GffHaDpHPGNIlv~~~g~-------------~~~~i~llDFGivg~  313 (537)
T PRK04750        277 F-------RDGFFHADMHPGNIFVSYDPP-------------ENPRYIALDFGIVGS  313 (537)
T ss_pred             H-------hCCeeeCCCChHHeEEecCCC-------------CCCeEEEEecceEEE
Confidence            4       589999999999999984321             234799999998854

>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]

Probab=99.38  E-value=2e-13  Score=133.42  Aligned_cols=249  Identities=16%  Similarity=0.060  Sum_probs=171.0

Q ss_pred             EcCeeEEEEEEeeccCceEEEEEEecCCCCceEEEEecCCCCChHHHHHHHHHhhhccccccccccce---eeecccCee
Q 018699           45 IGGKKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFPWEFYMYRQLDQRISGRERSSFGFAH---RIHLYSDYS  121 (351)
Q Consensus        45 i~~~~Y~i~~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~  121 (351)
                      ..-+.+.+.+-+.+|+++.++.+. ....|...++|+............+.....-....++..+..+   .-+......
T Consensus       801 sS~d~~~i~~p~qS~sp~ss~p~~-pa~sgh~~~~~v~~~ap~i~~~~~~s~r~~s~~~i~p~~P~v~~~~~s~~~rsP~  879 (1205)
T KOG0606|consen  801 SSPDGFEITKPSQSGSPSSSFPAS-PAGSGHTRPSKVHGLAPKIRTNDYESIRSKSNILITPRSPAVVRSFPSFPCRSPL  879 (1205)
T ss_pred             CCCccceecccccCCCCcccccCC-ccccccccchhhhccchhhccccccccCCccCccccCCCCceecccCCCCCCCCc
Confidence            345678888899999999999998 6777777777765433222211111111111111111112222   113346677


Q ss_pred             EEEEEecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeeccCCCCCc
Q 018699          122 ILVCDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSGPW  201 (351)
Q Consensus       122 ~lv~e~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~~~~~~  201 (351)
                      +++++|+.+++|...+..    -+..+++.++.....+..+..+||+..+.|+|++|.|++..                 
T Consensus       880 ~L~~~~~~~~~~~Skl~~----~~~~saepaRs~i~~~vqs~e~L~s~~r~h~~~~p~~~l~~-----------------  938 (1205)
T KOG0606|consen  880 PLVGHYLNGGDLPSKLHN----SGCLSAEPARSPILERVQSLESLHSSLRKHRDLKPDSLLIA-----------------  938 (1205)
T ss_pred             chhhHHhccCCchhhhhc----CCCcccccccchhHHHHhhhhccccchhhcccccccchhhc-----------------
Confidence            999999989999998887    35678888888899999999999999999999999999998                 


Q ss_pred             ccCCeEEeecCCccccccC---------------------------CCC--ccccccccCCCcccceeccCCCCCccchH
Q 018699          202 QDQGLCLVDWGRGIDLHLF---------------------------PDN--MEFEGDCRTSGFRCIEMQEKKPWKFQVDT  252 (351)
Q Consensus       202 ~~~~~~l~Dfg~a~~~~~~---------------------------~~~--~~~~~~~g~~~y~aPE~~~~~~~~~~~Di  252 (351)
                      ..+..++.|||........                           ..+  .......+|+.|.+||...+......+|+
T Consensus       939 ~~gh~~l~~~~t~~~vg~~~p~~~~sg~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~t~~~laPe~~lg~~hgs~ad~ 1018 (1205)
T KOG0606|consen  939 YDGHRPLTDFGTLSKVGLIPPTTDLSGPSSSGTPRRLSRSERRPQLSADEARRKHAVVGTPDYLAPEILLGRRHGSAADW 1018 (1205)
T ss_pred             ccCCcccCccccccccccccCcCCcccccccCccccccccccccccccchhhccccccCCCcccCCcccccccCCCcchh
Confidence            4455666666522111100                           000  11233468999999999999888999999


Q ss_pred             hHHHHHHHHHHhCccccccccCCCCCceeeecCc---chhhhhHHHHHHHHHHHHhcCCCCCChHHH
Q 018699          253 YGLCAIVHMMLHNSYMEIEKKASPDGGLVYLPKL---SFKRYWKVELWKSLFTNLLNMSSGNDKEVL  316 (351)
Q Consensus       253 wslG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~li~~~L~~dP~~R~s~~  316 (351)
                      |+.|+++++.++|.+||....+......+.....   .-+..-+ +..++++.+.|..+|.+|..+.
T Consensus      1019 ~~~g~~l~e~l~g~pp~na~tpq~~f~ni~~~~~~~p~g~~~~s-~~aq~~~~~ll~~~~~qr~~a~ 1084 (1205)
T KOG0606|consen 1019 WSSGVCLFEVLTGIPPFNAETPQQIFENILNRDIPWPEGPEEGS-YEAQDLINRLLTEEPTQRLGAK 1084 (1205)
T ss_pred             hhhhhhhhhhhcCCCCCCCcchhhhhhccccCCCCCCCCccccC-hhhhhhhhhhhccCchhccCcc
Confidence            9999999999999999988776532222221111   1222223 7889999999999999998876

>KOG3087 consensus Serine/threonine protein kinase [General function prediction only]

Probab=99.28  E-value=8.9e-11  Score=93.81  Aligned_cols=144  Identities=17%  Similarity=0.187  Sum_probs=95.8

Q ss_pred             EEEEeeccCceEEEEEEecCCCCceEEEEe-cCCCCChH--------HHHHHHHHhhhccccccccccceeeecccCeeE
Q 018699           52 IKGCAGQGGFAKVFKAYVNGDPEDVVALKI-QKPAFPWE--------FYMYRQLDQRISGRERSSFGFAHRIHLYSDYSI  122 (351)
Q Consensus        52 i~~~lg~G~~g~V~~a~~~~~~~~~vaiK~-~~~~~~~e--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  122 (351)
                      ....|-+|+.+.|+++.+   .|+..+||. +.+.....        ....++ .+.+.......+..+..++.+...-+
T Consensus        11 ~l~likQGAEArv~~~~~---~Ge~~iIK~Rf~K~YRHP~LD~kLtr~Rt~~E-ar~l~k~~~~GI~~P~l~~~D~~~~~   86 (229)
T KOG3087|consen   11 SLELIKQGAEARVPRGSF---SGEAAIIKERFSKRYRHPALDQKLTRKRTKQE-ARLLAKCRALGIPAPRLIFIDTYGGQ   86 (229)
T ss_pred             cceeeeccceeeEeeecc---CCceeEEeecccccccchHHHHHHHHHHHHHH-HHHHHHHHHhCCCCceEEEEecCCCe
Confidence            567788999999999985   367777875 33222211        011000 11111112224444555555555567


Q ss_pred             EEEEecCC-CCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeeccCCCCCc
Q 018699          123 LVCDYLSQ-GTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSGPW  201 (351)
Q Consensus       123 lv~e~~~~-~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~~~~~~  201 (351)
                      ++|||++| .++.+++...-  .....++....+++.|-+.+.-||.++++||||..+||++.+++.+            
T Consensus        87 i~ME~~~g~~~vk~~i~~~~--~~~~~d~~~~~~~~~iG~~igklH~ndiiHGDLTTSNill~~~~~~------------  152 (229)
T KOG3087|consen   87 IYMEFIDGASTVKDFILSTM--EDESEDEGLAELARRIGELIGKLHDNDIIHGDLTTSNILLRSDGNQ------------  152 (229)
T ss_pred             EEEEeccchhHHHHHHHHHc--cCcccchhHHHHHHHHHHHHHHhhhCCeecccccccceEEecCCCc------------
Confidence            89999966 47888887653  2233344447889999999999999999999999999999976643            


Q ss_pred             ccCCeEEeecCCcc
Q 018699          202 QDQGLCLVDWGRGI  215 (351)
Q Consensus       202 ~~~~~~l~Dfg~a~  215 (351)
                        ..+.++|||++.
T Consensus       153 --~~~~lIdfgls~  164 (229)
T KOG3087|consen  153 --ITPILIDFGLSS  164 (229)
T ss_pred             --CceEEEeecchh
Confidence              346899999875

>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]

Probab=99.23  E-value=2.6e-11  Score=112.82  Aligned_cols=250  Identities=14%  Similarity=0.057  Sum_probs=167.3

Q ss_pred             EcCeeEEEEEEeeccCceEEEEEEecCCCCceEEEEecCCCCC---hHHHHHHHHHhhhccccccccccceeeecccCee
Q 018699           45 IGGKKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFP---WEFYMYRQLDQRISGRERSSFGFAHRIHLYSDYS  121 (351)
Q Consensus        45 i~~~~Y~i~~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~~---~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  121 (351)
                      ....++..+..||.|.|+.|+.+..+..++..+++|.......   .+..-+.+.........+...+.....+..-...
T Consensus       262 ~~~~df~~v~~i~~~~~~~~~~~~~r~~~~~~Y~~ke~~~~l~~~~~di~sl~ev~l~~~l~~~~~~~g~~~~W~~~r~~  341 (524)
T KOG0601|consen  262 CKLTDFGLVSKISDGNFSSVFKVSKRPEGDCIYAAKELLNGLATFASDIFSLGEVILEAILGSHLPSVGKNSSWSQLRQG  341 (524)
T ss_pred             eecCCcceeEEccCCccccceeeeecCCCCceEeChhhhccccchHhhhcchhhhhHhhHhhcccccCCCCCCccccccc
Confidence            4456899999999999999999884436778888887654422   2222222222222222222233322333334455


Q ss_pred             EEEEEecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeeccCCCCCc
Q 018699          122 ILVCDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSGPW  201 (351)
Q Consensus       122 ~lv~e~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~~~~~~  201 (351)
                      |+=.|||+++++......    ...+.+...+.+..|++.++.++|+..++|+|++|+||++..+               
T Consensus       342 ~ip~e~~~~~s~~l~~~~----~~~~d~~~~~~~~~q~~~~l~~i~s~~~~~~d~~psni~i~~~---------------  402 (524)
T KOG0601|consen  342 YIPLEFCEGGSSSLRSVT----SQMLDEDPRLRLTAQILTALNVIHSKLFVHLDVKPSNILISND---------------  402 (524)
T ss_pred             cCchhhhcCcchhhhhHH----HHhcCcchhhhhHHHHHhccccccchhhhcccccccceeeccc---------------
Confidence            688899999988876643    3567888899999999999999999999999999999999831               


Q ss_pred             ccCCeEEeecCCccccccCCCCccccccccCCCc-ccceeccCCCCCccchHhHHHHHHHHHHhCccccccccCCCCCce
Q 018699          202 QDQGLCLVDWGRGIDLHLFPDNMEFEGDCRTSGF-RCIEMQEKKPWKFQVDTYGLCAIVHMMLHNSYMEIEKKASPDGGL  280 (351)
Q Consensus       202 ~~~~~~l~Dfg~a~~~~~~~~~~~~~~~~g~~~y-~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~p~~~~~~~~~~~~  280 (351)
                       .+..++.|||++........    .....+..| .++.......+..++|++|||..+.+.++|...-......   ..
T Consensus       403 -~~~~~~~~~~~~t~~~~~~~----~~~~~~r~~p~~~~~~e~~~~~~~~~~~sl~~~~~e~~~~~~ls~~~~~~---~~  474 (524)
T KOG0601|consen  403 -GFFSKLGDFGCWTRLAFSSG----VFHHIDRLYPIAEILLEDYPHLSKADIFSLGLSVDEAITGSPLSESGVQS---LT  474 (524)
T ss_pred             -hhhhhccccccccccceecc----cccccccccccchhhccccccccccccccccccccccccCcccCcccccc---ee
Confidence             15678999998854221111    111123334 3555556677789999999999999999997543322221   11


Q ss_pred             eeecCcchhhhhHHHHHHHHHHHHhcCCCCCChHHHHHHHHH
Q 018699          281 VYLPKLSFKRYWKVELWKSLFTNLLNMSSGNDKEVLQNLQKS  322 (351)
Q Consensus       281 ~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~~~  322 (351)
                      +.....+...... ..+..+.+.++.+++..|+.+.++..|.
T Consensus       475 i~~~~~p~~~~~~-~~~q~~~kv~~~~~~~~~~l~~~l~~~~  515 (524)
T KOG0601|consen  475 IRSGDTPNLPGLK-LQLQVLLKVMINPDRKRRPSAVELSLHS  515 (524)
T ss_pred             eecccccCCCchH-HhhhhhhhhhcCCccccchhhhhhcccc
Confidence            2222233333333 6788999999999999999999887754

>COG3642 Mn2+-dependent serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.23  E-value=2.1e-10  Score=92.13  Aligned_cols=130  Identities=18%  Similarity=0.270  Sum_probs=88.3

Q ss_pred             EEeeccCceEEEEEEecCCCCceEEEEe-cCCCCCh----H-HHHHHHHH--hhhccccccccccceeeecccCeeEEEE
Q 018699           54 GCAGQGGFAKVFKAYVNGDPEDVVALKI-QKPAFPW----E-FYMYRQLD--QRISGRERSSFGFAHRIHLYSDYSILVC  125 (351)
Q Consensus        54 ~~lg~G~~g~V~~a~~~~~~~~~vaiK~-~~~~~~~----e-~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~lv~  125 (351)
                      ..+++|+-+.++.+.+.   |..+++|. ..+....    + ....+...  ..+.......+..+..+..+.+...++|
T Consensus         2 ~~i~~GAEa~i~~~~~~---g~~av~K~Ri~K~YR~p~LD~klrr~Rt~~Earil~~a~~~GV~~P~v~dvD~~~~~I~m   78 (204)
T COG3642           2 DLIKQGAEAIIYLTDFL---GLPAVVKERIPKRYRHPELDEKLRRERTRREARILAKAREAGVPVPIVYDVDPDNGLIVM   78 (204)
T ss_pred             chhhCCcceeEEeeecc---CcceEEEeecCcccCChHHHHHHHHHHHHHHHHHHHHHHHcCCCCCeEEEEcCCCCEEEE
Confidence            35789999999999752   34477775 3333221    1 11111111  1122223335555566666677778999


Q ss_pred             EecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeeccCCCCCcccCC
Q 018699          126 DYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSGPWQDQG  205 (351)
Q Consensus       126 e~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~~~~~~~~~~  205 (351)
                      ||++|..|.+.+...           ...++..+-.-+.-||..||+||||.++||++.                  ++.
T Consensus        79 e~I~G~~lkd~l~~~-----------~~~~~r~vG~~vg~lH~~givHGDLTtsNiIl~------------------~~~  129 (204)
T COG3642          79 EYIEGELLKDALEEA-----------RPDLLREVGRLVGKLHKAGIVHGDLTTSNIILS------------------GGR  129 (204)
T ss_pred             EEeCChhHHHHHHhc-----------chHHHHHHHHHHHHHHhcCeecCCCccceEEEe------------------CCc
Confidence            999998999888762           134566777778899999999999999999998                  334


Q ss_pred             eEEeecCCcc
Q 018699          206 LCLVDWGRGI  215 (351)
Q Consensus       206 ~~l~Dfg~a~  215 (351)
                      +.++|||++.
T Consensus       130 i~~IDfGLg~  139 (204)
T COG3642         130 IYFIDFGLGE  139 (204)
T ss_pred             EEEEECCccc
Confidence            8999999885

>cd05151 ChoK Choline Kinase (ChoK)

Probab=99.22  E-value=9.8e-11  Score=95.86  Aligned_cols=122  Identities=16%  Similarity=0.173  Sum_probs=82.7

Q ss_pred             EEEeeccCceEEEEEEecCCCCceEEEEecCCCCC------hHHHHHHHHHhhhccccccccccceeeecccCeeEEEEE
Q 018699           53 KGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFP------WEFYMYRQLDQRISGRERSSFGFAHRIHLYSDYSILVCD  126 (351)
Q Consensus        53 ~~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~~------~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e  126 (351)
                      .+.|+.|..+.||++..   .++.|++|+......      .|...++.+...      ...+.+..  ......++|||
T Consensus         3 ~~~l~~G~~~~vy~~~~---~~~~~~lK~~~~~~~~~~~~~~E~~~l~~l~~~------~~~P~~~~--~~~~~~~lv~e   71 (170)
T cd05151           3 ISPLKGGMTNKNYRVEV---ANKKYVVRIPGNGTELLINRENEAENSKLAAEA------GIGPKLYY--FDPETGVLITE   71 (170)
T ss_pred             eeecCCcccCceEEEEE---CCeEEEEEeCCCCcccccCHHHHHHHHHHHHHh------CCCCceEE--EeCCCCeEEEE
Confidence            46788999999999984   267899999765531      233333333321      11122222  22334579999


Q ss_pred             ecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCc-----eecCCCCCcEEEeecCCcceeeccCCCCCc
Q 018699          127 YLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGI-----IHGDFKPDNLLIRYARDELTVLDHDRSGPW  201 (351)
Q Consensus       127 ~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i-----~H~dl~p~Nill~~~~~~~~~~~~~~~~~~  201 (351)
                      |++|.++...  .       .   ....++.+++.+++.||+.++     +|+|++|.||+++                 
T Consensus        72 ~i~G~~l~~~--~-------~---~~~~~~~~l~~~l~~LH~~~~~~~~~~HgD~~~~Nil~~-----------------  122 (170)
T cd05151          72 FIEGSELLTE--D-------F---SDPENLEKIAKLLKKLHSSPLPDLVPCHNDLLPGNFLLD-----------------  122 (170)
T ss_pred             ecCCCccccc--c-------c---cCHHHHHHHHHHHHHHhCCCCCCceeecCCCCcCcEEEE-----------------
Confidence            9999877643  0       1   112346789999999999985     9999999999998                 


Q ss_pred             ccCCeEEeecCCcc
Q 018699          202 QDQGLCLVDWGRGI  215 (351)
Q Consensus       202 ~~~~~~l~Dfg~a~  215 (351)
                       ++.++++|||.+.
T Consensus       123 -~~~~~liDf~~a~  135 (170)
T cd05151         123 -DGRLWLIDWEYAG  135 (170)
T ss_pred             -CCeEEEEeccccc
Confidence             2348899999774

The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC), and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. Bacterial ChoK is also referred to as licA protein. ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major ph

>KOG1243 consensus Protein kinase [General function prediction only]

Probab=99.18  E-value=1e-09  Score=103.46  Aligned_cols=184  Identities=13%  Similarity=0.124  Sum_probs=132.2

Q ss_pred             EEEEEEeeccCceEEEE-EEecCCCCceEEEEecCCCCChHHHHHHHHHhhhccccccccccceeeecccCeeEEEEEec
Q 018699           50 YQIKGCAGQGGFAKVFK-AYVNGDPEDVVALKIQKPAFPWEFYMYRQLDQRISGRERSSFGFAHRIHLYSDYSILVCDYL  128 (351)
Q Consensus        50 Y~i~~~lg~G~~g~V~~-a~~~~~~~~~vaiK~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~  128 (351)
                      |.+ ...+-++.+ +|. |. ...++.+|.|..++............-.+++....||++..........+..|+|+|.+
T Consensus        15 Y~l-e~~~~~~~a-~~~~~t-~k~~~~~vsVF~~~~~~~~~~~~~~~A~k~lKtlRHP~Il~yL~t~e~~~~~ylvTErV   91 (690)
T KOG1243|consen   15 YDL-EETAFSSEA-LWPDGT-RKADGGPVSVFVYKRSNGEVTELAKRAVKRLKTLRHPNILSYLDTTEEEGTLYLVTERV   91 (690)
T ss_pred             ccc-ccccCCCcc-cccccc-eeccCCceEEEEEeCCCchhhHHHHHHHHHhhhccCchhhhhhhhhcccCceEEEeecc
Confidence            555 444445554 443 44 45667888888877655422334444556677788999988888888888999999998


Q ss_pred             CCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHH-HCCceecCCCCCcEEEeecCCcceeeccCCCCCcccCCeE
Q 018699          129 SQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLH-DVGIIHGDFKPDNLLIRYARDELTVLDHDRSGPWQDQGLC  207 (351)
Q Consensus       129 ~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH-~~~i~H~dl~p~Nill~~~~~~~~~~~~~~~~~~~~~~~~  207 (351)
                      .  .|..+++..       ....+..-+.||+.||.||| +.+++|++++.+.|+++                 ..|..+
T Consensus        92 ~--Pl~~~lk~l-------~~~~v~~Gl~qIl~AL~FL~~d~~lvHgNv~~~SVfVn-----------------~~GeWk  145 (690)
T KOG1243|consen   92 R--PLETVLKEL-------GKEEVCLGLFQILAALSFLNDDCNLVHGNVCKDSVFVN-----------------ESGEWK  145 (690)
T ss_pred             c--cHHHHHHHh-------HHHHHHHHHHHHHHHHHHHhccCCeeeccEeeeeEEEc-----------------CCCcEE
Confidence            4  778887763       36777888999999999998 55899999999999999                 888899


Q ss_pred             EeecCCccccccCCCCccccccccCCCcccceeccCCCCCccchHhHHHHHHHHHHhCc
Q 018699          208 LVDWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQEKKPWKFQVDTYGLCAIVHMMLHNS  266 (351)
Q Consensus       208 l~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~  266 (351)
                      |++|..+.....+....  ....-.-.|..|+.+....  ...|.|.|||++++++.|.
T Consensus       146 Lggle~v~~~~~~~~~~--~~~~~~~s~~~P~~~~~s~--~s~D~~~Lg~li~el~ng~  200 (690)
T KOG1243|consen  146 LGGLELVSKASGFNAPA--KSLYLIESFDDPEEIDPSE--WSIDSWGLGCLIEELFNGS  200 (690)
T ss_pred             EeeeEEEeccccCCccc--ccchhhhcccChhhcCccc--cchhhhhHHHHHHHHhCcc
Confidence            99999876544333211  1111223456666543322  4579999999999999993

>KOG3741 consensus Poly(A) ribonuclease subunit [RNA processing and modification]

Probab=98.93  E-value=6.3e-08  Score=89.11  Aligned_cols=220  Identities=13%  Similarity=0.035  Sum_probs=143.4

Q ss_pred             CceEEEEEEecCCCCceEEEEecCCCCChHHHHHHHHHhhhccccccccccceeeecc----cCeeEEEEEecCC-CCHH
Q 018699           60 GFAKVFKAYVNGDPEDVVALKIQKPAFPWEFYMYRQLDQRISGRERSSFGFAHRIHLY----SDYSILVCDYLSQ-GTLQ  134 (351)
Q Consensus        60 ~~g~V~~a~~~~~~~~~vaiK~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~lv~e~~~~-~sL~  134 (351)
                      -..+.|+|. ...+|..|++|.+.............+.+...+..|.+++.+..++..    +..+++|++|+++ ++|.
T Consensus       288 ~~~Ttyk~~-s~~DG~~YvLkRlhg~r~~~~nk~t~lve~wkkl~h~NvV~frevf~t~tF~D~SlvlvYDYyP~s~TL~  366 (655)
T KOG3741|consen  288 FSITTYKAT-SNVDGNAYVLKRLHGDRDQSTNKDTSLVEAWKKLCHTNVVPFREVFLTYTFGDLSLVLVYDYYPSSPTLY  366 (655)
T ss_pred             ccceeEeee-eccCCceeeeeeeccccccCcccchHHHHHHHHhccCceeehhhhhhhhccCcceEEEEEecCCCCchHH
Confidence            346889998 577889999998843222222233333444455666778777777652    4577999999875 5777


Q ss_pred             HHHHHH-----------HhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeeccCCCCCccc
Q 018699          135 DAINSY-----------VVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSGPWQD  203 (351)
Q Consensus       135 ~~l~~~-----------~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~~~~~~~~  203 (351)
                      +..-..           ..++...++..+|.++.|+..||.++|+.|+...-|.|.+|+++                 ..
T Consensus       367 d~~F~~~~~t~~~n~~~~~~~~~~~e~~lW~y~~QLtaaL~sIHssGLAck~L~~~kIlv~-----------------G~  429 (655)
T KOG3741|consen  367 DLYFANPPFTKRTNSFYPSQNLKAPEEVLWSYISQLTAALYSIHSSGLACKTLDLKKILVT-----------------GK  429 (655)
T ss_pred             HHHccCCccccccccccccCCCCchHHHHHHHHHHHHHHHHHHHhcCceeecccHhHeEee-----------------Cc
Confidence            654321           11244678999999999999999999999999999999999999                 44


Q ss_pred             CCeEEeecCCccccccCCCCccccccccCCCcccceeccCCCCCccchHhHHHHHHHHHHhCccccccccCCCCCceeee
Q 018699          204 QGLCLVDWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQEKKPWKFQVDTYGLCAIVHMMLHNSYMEIEKKASPDGGLVYL  283 (351)
Q Consensus       204 ~~~~l~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~p~~~~~~~~~~~~~~~  283 (351)
                      ..++|+..|+.-...   .+.           .+|  +.+   -.+-|.=.||.+++.|.+|..--.....  ..+   .
T Consensus       430 ~RIriS~C~i~Dvl~---~d~-----------~~~--le~---~Qq~D~~~lG~ll~aLAt~~~ns~~~d~--~~~---s  485 (655)
T KOG3741|consen  430 MRIRISGCGIMDVLQ---EDP-----------TEP--LES---QQQNDLRDLGLLLLALATGTENSNRTDS--TQS---S  485 (655)
T ss_pred             ceEEEecccceeeec---CCC-----------Ccc--hhH---HhhhhHHHHHHHHHHHhhcccccccccc--hHH---H
Confidence            457776666442211   110           111  111   2467999999999999999532111110  000   0


Q ss_pred             cCcchhhhhHHHHHHHHHHHHhcCCCCCChHHHHHHHHHH
Q 018699          284 PKLSFKRYWKVELWKSLFTNLLNMSSGNDKEVLQNLQKSF  323 (351)
Q Consensus       284 ~~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~~~~  323 (351)
                      ....+....+ .+++++|.-+...++++ -+..+++.+..
T Consensus       486 ~~~~I~~~yS-~D~rn~v~yl~s~~~~~-ksI~~llp~~~  523 (655)
T KOG3741|consen  486 HLTRITTTYS-TDLRNVVEYLESLNFRE-KSIQDLLPMIG  523 (655)
T ss_pred             HHHHhhhhhh-HHHHHHHHHHHhcCccc-ccHHHHHHHHH
Confidence            1112223334 78899999999999997 66666666543

>PRK15123 lipopolysaccharide core heptose(I) kinase RfaP; Provisional

Probab=98.93  E-value=3.1e-08  Score=86.71  Aligned_cols=84  Identities=18%  Similarity=0.239  Sum_probs=64.2

Q ss_pred             eeEEEEEecCCC-CHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeeccCCC
Q 018699          120 YSILVCDYLSQG-TLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRS  198 (351)
Q Consensus       120 ~~~lv~e~~~~~-sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~~~  198 (351)
                      ..++|||++++. +|.+++....  ..+.+......++.+++..++-||..||+|+|+++.||+++.+...         
T Consensus       109 ~s~LVte~l~~~~sL~~~~~~~~--~~~~~~~~~~~ll~~la~~i~~LH~~Gi~HgDL~~~NiLl~~~~~~---------  177 (268)
T PRK15123        109 TSFIITEDLAPTISLEDYCADWA--TNPPDPRLKRMLIKRVATMVRDMHAAGINHRDCYICHFLLHLPFPG---------  177 (268)
T ss_pred             eeEEEEeeCCCCccHHHHHHhhc--ccCCCHHHHHHHHHHHHHHHHHHHHCcCccCCCChhhEEEeccccC---------
Confidence            468999999775 8999886432  1344566777889999999999999999999999999999842000         


Q ss_pred             CCcccCCeEEeecCCcc
Q 018699          199 GPWQDQGLCLVDWGRGI  215 (351)
Q Consensus       199 ~~~~~~~~~l~Dfg~a~  215 (351)
                       ......+.++||+.+.
T Consensus       178 -~~~~~~~~LIDl~r~~  193 (268)
T PRK15123        178 -REEDLKLSVIDLHRAQ  193 (268)
T ss_pred             -CCCCceEEEEECCccc
Confidence             0024568999999763

>PF01163 RIO1: RIO1 family; InterPro: IPR018934 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases

Probab=98.89  E-value=5.7e-09  Score=86.19  Aligned_cols=73  Identities=23%  Similarity=0.435  Sum_probs=48.9

Q ss_pred             eeEEEEEecC--CCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHH-HHHCCceecCCCCCcEEEeecCCcceeeccC
Q 018699          120 YSILVCDYLS--QGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILES-LHDVGIIHGDFKPDNLLIRYARDELTVLDHD  196 (351)
Q Consensus       120 ~~~lv~e~~~--~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~-LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~  196 (351)
                      ..++||||++  |..+..+...      .++......++.+++..+.. +|..|++|||+++.||+++            
T Consensus        80 ~~~ivME~I~~~G~~~~~l~~~------~~~~~~~~~~~~~il~~~~~~~~~~givHGDLs~~NIlv~------------  141 (188)
T PF01163_consen   80 RNVIVMEYIGEDGVPLPRLKDV------DLSPEEPKELLEEILEEIIKMLHKAGIVHGDLSEYNILVD------------  141 (188)
T ss_dssp             TTEEEEE--EETTEEGGCHHHC------GGGGSTHHHHHHHHHHHHHHHHHCTTEEESS-STTSEEEE------------
T ss_pred             CCEEEEEecCCCccchhhHHhc------cccchhHHHHHHHHHHHHHHHHHhcCceecCCChhhEEee------------
Confidence            3479999997  5555544332      23344556677888885555 6799999999999999998            


Q ss_pred             CCCCcccCCeEEeecCCccc
Q 018699          197 RSGPWQDQGLCLVDWGRGID  216 (351)
Q Consensus       197 ~~~~~~~~~~~l~Dfg~a~~  216 (351)
                           .+ .+.++|||.+..
T Consensus       142 -----~~-~~~iIDf~qav~  155 (188)
T PF01163_consen  142 -----DG-KVYIIDFGQAVD  155 (188)
T ss_dssp             -----TT-CEEE--GTTEEE
T ss_pred             -----cc-eEEEEecCccee
Confidence                 33 699999998864

Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents RIO kinase, they exhibit little sequence similarity with eukaryotic protein kinases, and are classified as atypical protein kinases []. The conformation of ATP when bound to the RIO kinases is unique when compared with ePKs, such as serine/threonine kinases or the insulin receptor tyrosine kinase, suggesting that the detailed mechanism by which the catalytic aspartate of RIO kinases participates in phosphoryl transfer may not be identical to that employed in known serine/threonine ePKs. Representatives of the RIO family are present in organisms varying from Archaea to humans, although the RIO3 proteins have only been identified in multicellular eukaryotes, to date. Yeast Rio1 and Rio2 proteins are required for proper cell cycle progression and chromosome maintenance, and are necessary for survival of the cells. These proteins are involved in the processing of 20 S pre-rRNA via late 18 S rRNA processing. ; GO: 0003824 catalytic activity, 0005524 ATP binding; PDB: 1TQP_A 1ZAR_A 1TQI_A 1ZAO_A 1TQM_A 3RE4_A 1ZTH_B 1ZP9_A 1ZTF_A.

>KOG2137 consensus Protein kinase [Signal transduction mechanisms]

Probab=98.84  E-value=6.8e-10  Score=105.06  Aligned_cols=144  Identities=13%  Similarity=0.098  Sum_probs=100.8

Q ss_pred             HHHHHHHHHHHC-CceecCCCCCcEEEeecCCcceeeccCCCCCcccCCeEEeecCCcccccc-----CCCCccccc--c
Q 018699          158 EMLCILESLHDV-GIIHGDFKPDNLLIRYARDELTVLDHDRSGPWQDQGLCLVDWGRGIDLHL-----FPDNMEFEG--D  229 (351)
Q Consensus       158 qi~~~l~~LH~~-~i~H~dl~p~Nill~~~~~~~~~~~~~~~~~~~~~~~~l~Dfg~a~~~~~-----~~~~~~~~~--~  229 (351)
                      +++.|+.++|.. ++||++|.|++|+++                 ..+..||+.|+.+.....     +........  .
T Consensus       107 ~v~dgl~flh~sAk~VH~ni~p~~i~~n-----------------a~~~wkl~Gf~f~v~~~~~~~~p~~~yd~~lp~~~  169 (700)
T KOG2137|consen  107 NVADGLAFLHRSAKVVHGNIQPEAIVVN-----------------ANGDWKLAGFSFCVNANGPTEYPFSEYDPPLPLLL  169 (700)
T ss_pred             cccchhhhhccCcceeecccchhheeec-----------------cCcceeeccchhhhccCCCCccccccCCCCCChhh
Confidence            344899999976 899999999999999                 888899999998754332     111010011  1


Q ss_pred             ccCCCcccceeccCCCCCccchHhHHHHHHHHHH-hCccccccccCCCCCcee--------eecCcchhhhhHHHHHHHH
Q 018699          230 CRTSGFRCIEMQEKKPWKFQVDTYGLCAIVHMML-HNSYMEIEKKASPDGGLV--------YLPKLSFKRYWKVELWKSL  300 (351)
Q Consensus       230 ~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~l~-~g~~p~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~l  300 (351)
                      .....|.|||.+.+..-+.++|+||+||.+|.+. .|..-+........+...        ..-...+|     .++++=
T Consensus       170 ~~~~~f~apE~~~~~~~~~~sd~fSlG~li~~i~~~gk~i~~a~~~~~~~~~~~~~~~~~~~~~s~~~p-----~el~~~  244 (700)
T KOG2137|consen  170 QPHLNFLAPEYLLGTTNTPASDVFSLGVLIYTIYNGGKSIIAANGGLLSYSFSRNLLNAGAFGYSNNLP-----SELRES  244 (700)
T ss_pred             ccCcccccchhhccccccccccceeeeeEEEEEecCCcchhhccCCcchhhhhhcccccccccccccCc-----HHHHHH
Confidence            2345699999998877789999999999999988 454444433332222111        11112233     788999


Q ss_pred             HHHHhcCCCCCChHHHHHHHHHH
Q 018699          301 FTNLLNMSSGNDKEVLQNLQKSF  323 (351)
Q Consensus       301 i~~~L~~dP~~R~s~~e~l~~~~  323 (351)
                      |.++|..++..||+..+++..+|
T Consensus       245 l~k~l~~~~~~rp~~~~l~~~~f  267 (700)
T KOG2137|consen  245 LKKLLNGDSAVRPTLDLLLSIPF  267 (700)
T ss_pred             HHHHhcCCcccCcchhhhhcccc
Confidence            99999999999997777766554

>cd05154 ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 and 11, N-terminal domain, and similar proteins

Probab=98.84  E-value=3.3e-08  Score=84.42  Aligned_cols=139  Identities=13%  Similarity=0.165  Sum_probs=81.8

Q ss_pred             EEeeccCceEEEEEEecCCCCceEEEEecCCCCC----hHHHHHHHHHhhhccccccccccceeeeccc---CeeEEEEE
Q 018699           54 GCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFP----WEFYMYRQLDQRISGRERSSFGFAHRIHLYS---DYSILVCD  126 (351)
Q Consensus        54 ~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~~----~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~lv~e  126 (351)
                      +.|+.|..+.||++..  .+|+.+++|+......    ........+...+... ....+.+.......   +..++|||
T Consensus         4 ~~l~~G~~n~~~~v~~--~~g~~~ilK~~~~~~~~~~~~~~~~E~~~~~~l~~~-~~~vp~~~~~~~~~~~~~~~~~v~e   80 (223)
T cd05154           4 RQLSGGQSNLTYLLTA--GGGRRLVLRRPPPGALLPSAHDVAREYRVLRALAGT-GVPVPKVLALCEDPSVLGTPFYVME   80 (223)
T ss_pred             eecCCCccceEEEEEe--cCCcceEEEeCCCcccCcccccHHHHHHHHHHhhCC-CCCCCCEEEECCCCCccCCceEEEE
Confidence            6789999999999984  2357899999765422    1222222222222221 11122233333222   35689999


Q ss_pred             ecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHH--------------------------------------
Q 018699          127 YLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHD--------------------------------------  168 (351)
Q Consensus       127 ~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~--------------------------------------  168 (351)
                      |++|.++.+.+..     ..++......++.+++.++..||+                                      
T Consensus        81 ~i~G~~l~~~~~~-----~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  155 (223)
T cd05154          81 RVDGRVLRDRLLR-----PELSPEERRALARALADTLAALHSVDPAAVGLGDLGRPGGYLERQVARWRRQYDASRTDEPP  155 (223)
T ss_pred             EeCCEecCCCCCC-----CCCCHHHHHHHHHHHHHHHHHHhCCChhhcCCcccCCCCchHHHHHHHHHHHHHhhcccccH
Confidence            9998877654321     123344444445555555555542                                      


Q ss_pred             ------------------CCceecCCCCCcEEEeecCCcceeeccCCCCCcccCCeEEeecCCcc
Q 018699          169 ------------------VGIIHGDFKPDNLLIRYARDELTVLDHDRSGPWQDQGLCLVDWGRGI  215 (351)
Q Consensus       169 ------------------~~i~H~dl~p~Nill~~~~~~~~~~~~~~~~~~~~~~~~l~Dfg~a~  215 (351)
                                        ..++|+|+.|.||+++.+               ..+.+.|+||+.+.
T Consensus       156 ~~~~~~~~~~~~~~~~~~~~l~HgD~~~~Nil~~~~---------------~~~~~~iID~e~~~  205 (223)
T cd05154         156 AMERLLRWLEAHLPADSRPGLVHGDYRLGNVLFHPD---------------EPRVVAVLDWELAT  205 (223)
T ss_pred             HHHHHHHHHHhhCCCCCCcEEEECCCCcccEEEcCC---------------CCcEEEEEeccccc
Confidence                              247999999999999831               03457899999764

This subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of bacterial and eukaryotic proteins with similarity to the N-terminal domains of vertebrate ACAD10 and ACAD11. ACADs are a family of flavoproteins that are involved in the beta-oxidation of fatty acyl-CoA derivatives. ACAD deficiency can cause metabolic disorders including muscle fatigue, hypoglycemia, and hepatic lipidosis, among them. There are at least 11 distinct ACADs, some of which show distinct substrate specificities to either straight-chain or branched-chain fatty acids. ACAD10 is widely expressed in human tissues and is highly expressed in liver, kidney, pancreas, and spleen. ACAD10 and ACAD11 contain

>COG4248 Uncharacterized protein with protein kinase and helix-hairpin-helix DNA-binding domains [General function prediction only]

Probab=98.81  E-value=6.8e-08  Score=86.83  Aligned_cols=244  Identities=14%  Similarity=0.057  Sum_probs=145.7

Q ss_pred             EEEEEEeeccCceEEEEEEecCCCCceEEEEecCCCCChH-HHHHHHHHhhhcccccc-ccccceeee--cccC-eeEEE
Q 018699           50 YQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFPWE-FYMYRQLDQRISGRERS-SFGFAHRIH--LYSD-YSILV  124 (351)
Q Consensus        50 Y~i~~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~~~e-~~~~~~~~~~~~~~~~~-~~~~~~~~~--~~~~-~~~lv  124 (351)
                      ....+.||+|+.+.+|-.--    -+..+-|++..+...- ......+...-...... .+.+.....  ..++ ..-++
T Consensus        13 i~~gr~LgqGgea~ly~l~e----~~d~VAKIYh~Pppa~~aqk~a~la~~p~~p~~~~rvaWPqa~L~G~~~~~~iGfl   88 (637)
T COG4248          13 IPPGRPLGQGGEADLYTLGE----VRDQVAKIYHAPPPAAQAQKVAELAATPDAPLLNYRVAWPQATLHGGRRGKVIGFL   88 (637)
T ss_pred             cCCCccccCCccceeeecch----hhchhheeecCCCchHHHHHHHHhccCCCCcchhhhhcccHHHhhCCCccceeEEe
Confidence            34567899999999996541    2234667777654432 22222222211111100 012221111  1122 25678


Q ss_pred             EEecCCC-CHHHHHHHHH--hhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeeccCCCCCc
Q 018699          125 CDYLSQG-TLQDAINSYV--VIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSGPW  201 (351)
Q Consensus       125 ~e~~~~~-sL~~~l~~~~--~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~~~~~~  201 (351)
                      |..++|. .+..+.....  +.-....+..+.+.+..++.+.+.||+.|-+-||++++|+++.                 
T Consensus        89 mP~v~g~~pI~~~y~p~tRRqs~P~~~w~fllrvaRnlA~aFA~lH~~Gh~vGDVn~~~~lVs-----------------  151 (637)
T COG4248          89 MPKVSGKEPIHMIYSPATRRQSYPHCAWDFLLRVARNLASAFATLHEHGHVVGDVNQNSFLVS-----------------  151 (637)
T ss_pred             cccCCCccchhhhcCchhhcccCCccccHHHHHHHHHHHHHHHHHHhcCCcccccCccceeee-----------------
Confidence            8888764 3444443221  1123467888999999999999999999999999999999998                 


Q ss_pred             ccCCeEEeecCCccccccCCCCccccccccCCCcccceecc-----CCCCCccchHhHHHHHHHHHHhC-ccccccccC-
Q 018699          202 QDQGLCLVDWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQE-----KKPWKFQVDTYGLCAIVHMMLHN-SYMEIEKKA-  274 (351)
Q Consensus       202 ~~~~~~l~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~-----~~~~~~~~DiwslG~il~~l~~g-~~p~~~~~~-  274 (351)
                      ..+.+.|.|-..-..   ..++.-+...+|...|.+||...     +...+...|.|.||+++|+++.| ++||..-.. 
T Consensus       152 d~~~V~LVdsDsfqi---~~ng~~~~cpVg~~eftPPElQ~~~sf~g~~r~~~hD~FGLavLiF~lL~ggrHPysGI~~~  228 (637)
T COG4248         152 DDSKVVLVDSDSFQI---NANGTLHLCPVGVSEFTPPELQTLPSFVGFERTANHDNFGLAVLIFHLLFGGRHPYSGIPLI  228 (637)
T ss_pred             cCceEEEEcccceee---ccCCceEecccCccccCCHHHhccccccccCCCccccchhHHHHHHHHHhcCCCCCCccccc
Confidence            455566666442111   12234456667899999999864     33446889999999999999988 888753211 


Q ss_pred             ----------CCCCceee-----ecCcchhhhh--H--HHHHHHHHHHHhcCC--CCCChHHHH
Q 018699          275 ----------SPDGGLVY-----LPKLSFKRYW--K--VELWKSLFTNLLNMS--SGNDKEVLQ  317 (351)
Q Consensus       275 ----------~~~~~~~~-----~~~~~~~~~~--~--~~~~~~li~~~L~~d--P~~R~s~~e  317 (351)
                                ...+.+..     .+..+-|..|  +  .+.+..+..+|+..-  +.-||++.-
T Consensus       229 ~~ap~p~E~~Ia~g~f~ya~~~~~g~~p~P~~~P~~~Lpp~vqAlF~qaF~~~~~~~~RP~a~a  292 (637)
T COG4248         229 SDAPNPLETDIAHGRFAYASDQRRGLKPPPRSIPLSMLPPDVQALFQQAFTESGVATPRPTAKA  292 (637)
T ss_pred             CCCCCcchhhhhcceeeechhccCCCCCCCCCCChhhcCHHHHHHHHHHhcccCCCCCCCCHHH
Confidence                      11122211     1111111111  1  167788888888743  567888753

>COG0661 AarF Predicted unusual protein kinase [General function prediction only]

Probab=98.81  E-value=1.6e-08  Score=95.76  Aligned_cols=137  Identities=19%  Similarity=0.291  Sum_probs=87.6

Q ss_pred             EEeeccCceEEEEEEecCCCCceEEEEecCCCCC----------------------------------------------
Q 018699           54 GCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFP----------------------------------------------   87 (351)
Q Consensus        54 ~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~~----------------------------------------------   87 (351)
                      ..|+.++-|.||.|+.  .+|+.||||+..+...                                              
T Consensus       131 ~PiAsASIaQVH~A~L--~sG~~VAVKVqrPgi~~~i~~DL~il~~~a~~~~~~~~~~~~l~~~~vv~e~~~~l~~ElDy  208 (517)
T COG0661         131 EPIASASIAQVHRAVL--KSGEEVAVKVQRPGIRERIEADLKLLRRLARLIKRLPPGGRRLDLVEVVDEFEKRLREELDY  208 (517)
T ss_pred             CchhhhhHhhheeEEe--cCCCEEEEEecCCChHHHHHHHHHHHHHHHHHHHHcCCccccCChHHHHHHHHHHHHHHhCH
Confidence            7889999999999996  4599999999765311                                              


Q ss_pred             -hHHHHHHHHHhhhccccccccccceeeecccCeeEEEEEecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHH-HHHH
Q 018699           88 -WEFYMYRQLDQRISGRERSSFGFAHRIHLYSDYSILVCDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLC-ILES  165 (351)
Q Consensus        88 -~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~-~l~~  165 (351)
                       .|..-..++.+..  ...+.+..+..+....+.-.++|||+.|..+.+......   ..++...+   +..++. .+..
T Consensus       209 ~~EA~n~~~~~~nf--~~~~~v~VP~V~we~t~~~VLtmE~i~Gi~i~d~~~l~~---~g~d~k~i---a~~~~~~f~~q  280 (517)
T COG0661         209 RREAANAERFRENF--KDDPDVYVPKVYWEYTTRRVLTMEWIDGIKISDIAALKS---AGIDRKEL---AELLVRAFLRQ  280 (517)
T ss_pred             HHHHHHHHHHHHHc--CCCCCeEeceeehhccCCcEEEEEeeCCEecccHHHHHh---cCCCHHHH---HHHHHHHHHHH
Confidence             1111111111111  133444445555555677789999999988887743321   12222221   122221 1233


Q ss_pred             HHHCCceecCCCCCcEEEeecCCcceeeccCCCCCcccCCeEEeecCCcccc
Q 018699          166 LHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSGPWQDQGLCLVDWGRGIDL  217 (351)
Q Consensus       166 LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~~~~~~~~~~~~l~Dfg~a~~~  217 (351)
                      +-..|+.|+|..|.||+++                 .++.+.+.|||+....
T Consensus       281 ~~~dgffHaDpHpGNi~v~-----------------~~g~i~~lDfGi~g~l  315 (517)
T COG0661         281 LLRDGFFHADPHPGNILVR-----------------SDGRIVLLDFGIVGRL  315 (517)
T ss_pred             HHhcCccccCCCccceEEe-----------------cCCcEEEEcCcceecC
Confidence            3448999999999999999                 7788999999988644

>COG0478 RIO-like serine/threonine protein kinase fused to N-terminal HTH domain [Signal transduction mechanisms]

Probab=98.80  E-value=3.9e-08  Score=83.85  Aligned_cols=137  Identities=18%  Similarity=0.208  Sum_probs=87.4

Q ss_pred             eEEEEEEeeccCceEEEEEEecCCCCceEEEEecCC-------------------CCCh-HH---HHHHHHHhhhccccc
Q 018699           49 KYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKP-------------------AFPW-EF---YMYRQLDQRISGRER  105 (351)
Q Consensus        49 ~Y~i~~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~-------------------~~~~-e~---~~~~~~~~~~~~~~~  105 (351)
                      =+.+..+||-|.-|.||.|.+  ..|..+|||.=+-                   ...| ..   ...+++.. +.....
T Consensus        92 ve~iG~~IGvGKEsdVY~~~~--~~g~~~~vKfHR~GrtsFrkvk~~R~y~~~~~h~sWl~~sRl~A~rEf~~-L~~L~~  168 (304)
T COG0478          92 VEAIGTKIGVGKESDVYVAID--PKGRKVAVKFHRLGRTSFRKVKRNRDYLADKEHGSWLYVSRLAAEREFEA-LQRLYP  168 (304)
T ss_pred             HHhhccccccCccceEEEEEC--CCCCEEEEEEeecCchhhhhhcchhhhhccccCcchhhhHHHHHHHHHHH-HHHhhh
Confidence            356789999999999999993  4688999997221                   0001 00   11111110 111111


Q ss_pred             cccccceeeecccCeeEEEEEecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEee
Q 018699          106 SSFGFAHRIHLYSDYSILVCDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRY  185 (351)
Q Consensus       106 ~~~~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~  185 (351)
                      ....  .+-...-+...+|||+++|..|...-         ++.+....++..|++.+..+-..|++|||+++=||+++ 
T Consensus       169 ~G~~--VP~P~~~nRHaVvMe~ieG~eL~~~r---------~~~en~~~il~~il~~~~~~~~~GiVHGDlSefNIlV~-  236 (304)
T COG0478         169 EGVK--VPKPIAWNRHAVVMEYIEGVELYRLR---------LDVENPDEILDKILEEVRKAYRRGIVHGDLSEFNILVT-  236 (304)
T ss_pred             cCCC--CCCccccccceeeeehcccceeeccc---------CcccCHHHHHHHHHHHHHHHHHcCccccCCchheEEEe-
Confidence            1111  11112246778999999886665432         23334455566777777777789999999999999999 


Q ss_pred             cCCcceeeccCCCCCcccCCeEEeecCCccc
Q 018699          186 ARDELTVLDHDRSGPWQDQGLCLVDWGRGID  216 (351)
Q Consensus       186 ~~~~~~~~~~~~~~~~~~~~~~l~Dfg~a~~  216 (351)
                                      .+|.+.++||-.+..
T Consensus       237 ----------------~dg~~~vIDwPQ~v~  251 (304)
T COG0478         237 ----------------EDGDIVVIDWPQAVP  251 (304)
T ss_pred             ----------------cCCCEEEEeCccccc
Confidence                            778899999987753

>PF06176 WaaY: Lipopolysaccharide core biosynthesis protein (WaaY); InterPro: IPR009330 This family consists of several bacterial lipopolysaccharide core biosynthesis proteins (WaaY or RfaY)

Probab=98.74  E-value=1.8e-07  Score=78.22  Aligned_cols=136  Identities=18%  Similarity=0.227  Sum_probs=85.6

Q ss_pred             CeeEEEEEEeeccCceEEEEEEecCCCCceEEEEecCCCCChHHHHHHHH---------Hhhhcccccccccccee----
Q 018699           47 GKKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFPWEFYMYRQL---------DQRISGRERSSFGFAHR----  113 (351)
Q Consensus        47 ~~~Y~i~~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~~~e~~~~~~~---------~~~~~~~~~~~~~~~~~----  113 (351)
                      .++|.+.+.+-.....-|.+..   .+|+.+++|..+.........+..+         ...........+..+..    
T Consensus        30 ~~~~~~~kv~k~~~r~~ValIe---i~~~kyIlK~pr~~~~r~er~~~sf~kg~~~~~l~~~~~~i~~~g~~~~~~~yl~  106 (229)
T PF06176_consen   30 DNNYKIIKVFKNTKRNYVALIE---IDGKKYILKEPREENRRPERRFKSFFKGSEYSRLINNTDKIRNEGFTEPADPYLA  106 (229)
T ss_pred             hCCceEEEeecCCCccEEEEEE---ECCcEEEEeccchhhhhHHHHHHHHhccHHHHHHHHHHHHHHHcCccccccceee
Confidence            5688999999888877777665   4468899999775543222222211         00000110111111111    


Q ss_pred             ----eecccCeeEEEEEecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCc
Q 018699          114 ----IHLYSDYSILVCDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDE  189 (351)
Q Consensus       114 ----~~~~~~~~~lv~e~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~  189 (351)
                          ........+++|||++|..|.+...        +++    .+...+..++..+|+.|++|||..|.|++++     
T Consensus       107 ~ekk~~~~~~~~~ll~EYIeG~~l~d~~~--------i~e----~~~~ki~~~ikqlH~~G~~HGD~hpgNFlv~-----  169 (229)
T PF06176_consen  107 AEKKIFRYTSSYVLLMEYIEGVELNDIED--------IDE----DLAEKIVEAIKQLHKHGFYHGDPHPGNFLVS-----  169 (229)
T ss_pred             eeeeeccceeEEEEEEEEecCeecccchh--------cCH----HHHHHHHHHHHHHHHcCCccCCCCcCcEEEE-----
Confidence                1122345578999999988876532        222    2345677789999999999999999999998     


Q ss_pred             ceeeccCCCCCcccCCeEEeecCCcc
Q 018699          190 LTVLDHDRSGPWQDQGLCLVDWGRGI  215 (351)
Q Consensus       190 ~~~~~~~~~~~~~~~~~~l~Dfg~a~  215 (351)
                                   ++.++++||+...
T Consensus       170 -------------~~~i~iID~~~k~  182 (229)
T PF06176_consen  170 -------------NNGIRIIDTQGKR  182 (229)
T ss_pred             -------------CCcEEEEECcccc
Confidence                         3348999998553

The waaY, waaQ, and waaP genes are located in the central operon of the waa (formerly rfa) locus on the chromosome of Escherichia coli. This locus contains genes whose products are involved in the assembly of the core region of the lipopolysaccharide molecule. WaaY is the enzyme that phosphorylates HepII in this system [].; GO: 0009244 lipopolysaccharide core region biosynthetic process

>PF06293 Kdo: Lipopolysaccharide kinase (Kdo/WaaP) family; InterPro: IPR010440 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases

Probab=98.66  E-value=1.9e-07  Score=78.89  Aligned_cols=78  Identities=24%  Similarity=0.414  Sum_probs=64.1

Q ss_pred             eeEEEEEecCCC-CHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeeccCCC
Q 018699          120 YSILVCDYLSQG-TLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRS  198 (351)
Q Consensus       120 ~~~lv~e~~~~~-sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~~~  198 (351)
                      ..++|+|++++. +|.+++...    ...+......++.+++..++-||++||+|+|+++.||+++.++           
T Consensus        91 ~s~lite~l~~~~~L~~~~~~~----~~~~~~~~~~ll~~l~~~i~~lH~~gi~H~Dl~~~NILv~~~~-----------  155 (206)
T PF06293_consen   91 RSYLITEALPGAQDLRDLLQQW----EQLDPSQRRELLRALARLIAKLHDAGIYHGDLNPSNILVDPDD-----------  155 (206)
T ss_pred             eEEEEEEeCCCcccHHHHHHhh----cccchhhHHHHHHHHHHHHHHHHHCcCCCCCCCcccEEEeCCC-----------
Confidence            458999999874 799998873    3366667788899999999999999999999999999999543           


Q ss_pred             CCcccCCeEEeecCCcc
Q 018699          199 GPWQDQGLCLVDWGRGI  215 (351)
Q Consensus       199 ~~~~~~~~~l~Dfg~a~  215 (351)
                         ....+.++||+.+.
T Consensus       156 ---~~~~~~lIDld~~~  169 (206)
T PF06293_consen  156 ---GQYRFYLIDLDRMR  169 (206)
T ss_pred             ---CceeEEEEcchhce
Confidence               12368899999764

Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents lipopolysaccharide kinases which are related to protein kinases IPR000719 from INTERPRO. This family includes waaP (rfaP) gene product is required for the addition of phosphate to O-4 of the first heptose residue of the lipopolysaccharide (LPS) inner core region. It has previously been shown that WaaP is necessary for resistance to hydrophobic and polycationic antimicrobials in E. coli and that it is required for virulence in invasive strains of Salmonella enterica [].; GO: 0005524 ATP binding, 0016773 phosphotransferase activity, alcohol group as acceptor, 0009103 lipopolysaccharide biosynthetic process, 0016020 membrane

>PRK09902 hypothetical protein; Provisional

Probab=98.56  E-value=1.4e-06  Score=72.59  Aligned_cols=79  Identities=10%  Similarity=0.108  Sum_probs=60.8

Q ss_pred             eeEEEEEecCC-CCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeeccCCC
Q 018699          120 YSILVCDYLSQ-GTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRS  198 (351)
Q Consensus       120 ~~~lv~e~~~~-~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~~~  198 (351)
                      ..++|+|-+.| .+|.+++....  -.+.+......+..+++.+++-||+.|+.|+|+.+.||+++.++           
T Consensus        99 rA~LVTe~L~g~~~L~~~l~~~~--~~~~~~~~k~~il~~va~~ia~LH~~Gv~Hgdly~khIll~~~g-----------  165 (216)
T PRK09902         99 RALLVTEDMAGFISIADWYAQHA--VSPYSDEVRQAMLKAVALAFKKMHSVNRQHGCCYVRHIYVKTEG-----------  165 (216)
T ss_pred             EEEEEEEeCCCCccHHHHHhcCC--cCCcchHHHHHHHHHHHHHHHHHHHCCCcCCCCCHhheeecCCC-----------
Confidence            35899998843 58988876521  12446676778899999999999999999999999999998321           


Q ss_pred             CCcccCCeEEeecCCcc
Q 018699          199 GPWQDQGLCLVDWGRGI  215 (351)
Q Consensus       199 ~~~~~~~~~l~Dfg~a~  215 (351)
                          ...+.++||..++
T Consensus       166 ----~~~v~lIDlEk~r  178 (216)
T PRK09902        166 ----KAEAGFLDLEKSR  178 (216)
T ss_pred             ----CeeEEEEEhhccc
Confidence                1228999998664

>COG1718 RIO1 Serine/threonine protein kinase involved in cell cycle control [Signal transduction mechanisms / Cell division and chromosome partitioning]

Probab=98.51  E-value=7.1e-07  Score=75.49  Aligned_cols=137  Identities=18%  Similarity=0.253  Sum_probs=83.7

Q ss_pred             EEEeeccCceEEEEEEecCCCCceEEEEecCCCCChHHH---------------------HHHHHHhhhccc---ccccc
Q 018699           53 KGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFPWEFY---------------------MYRQLDQRISGR---ERSSF  108 (351)
Q Consensus        53 ~~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~~~e~~---------------------~~~~~~~~~~~~---~~~~~  108 (351)
                      ...|++|..++||.|.  ...+..+|+|++......-..                     +..+...+..++   ....+
T Consensus        53 ~g~istGKEA~Vy~a~--~~~~~~~avKiyr~~t~~fk~~~~Yi~gd~Rf~~~~~~rr~lv~~W~~kEf~NL~R~~eAGV  130 (268)
T COG1718          53 VGCISTGKEANVYLAE--TGDGRYVAVKIYRTSTSEFKRIRRYIQGDPRFRNSRSNRRKLVFAWARKEFRNLKRAYEAGV  130 (268)
T ss_pred             EeeecCCcceEEEeec--cCCCceEEEEEEehhhhhhhhHHHHHhcChhhhcCCCCHHHHHHHHHHHHHHHHHHHHHcCC
Confidence            4488899999999998  356799999997643211100                     111111111111   01111


Q ss_pred             ccceeeecccCeeEEEEEecCCCCHH-HHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHH-CCceecCCCCCcEEEeec
Q 018699          109 GFAHRIHLYSDYSILVCDYLSQGTLQ-DAINSYVVIGKSMEEVLCIYYTIEMLCILESLHD-VGIIHGDFKPDNLLIRYA  186 (351)
Q Consensus       109 ~~~~~~~~~~~~~~lv~e~~~~~sL~-~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~-~~i~H~dl~p~Nill~~~  186 (351)
                      ..+.++.  .....+||||+...... -.+.     .-++..+.+..+..+++..+.-|-. .++||+||+.=||++.  
T Consensus       131 rvP~Pi~--~~~nVLvMEfIg~~g~pAP~Lk-----Dv~~e~~e~~~~~~~~v~~~~~l~~~a~LVHgDLSEyNiL~~--  201 (268)
T COG1718         131 RVPEPIA--FRNNVLVMEFIGDDGLPAPRLK-----DVPLELEEAEGLYEDVVEYMRRLYKEAGLVHGDLSEYNILVH--  201 (268)
T ss_pred             CCCCcee--ecCCeEEEEeccCCCCCCCCcc-----cCCcCchhHHHHHHHHHHHHHHHHHhcCcccccchhhheEEE--
Confidence            1122211  12336999999443111 1111     1233344677788899999998887 8999999999999998  


Q ss_pred             CCcceeeccCCCCCcccCCeEEeecCCccc
Q 018699          187 RDELTVLDHDRSGPWQDQGLCLVDWGRGID  216 (351)
Q Consensus       187 ~~~~~~~~~~~~~~~~~~~~~l~Dfg~a~~  216 (351)
                                      .+.+.|+|+|.|..
T Consensus       202 ----------------~~~p~iID~~QaV~  215 (268)
T COG1718         202 ----------------DGEPYIIDVSQAVT  215 (268)
T ss_pred             ----------------CCeEEEEECccccc
Confidence                            34589999998864

>KOG1235 consensus Predicted unusual protein kinase [General function prediction only]

Probab=98.30  E-value=7.8e-06  Score=77.54  Aligned_cols=142  Identities=18%  Similarity=0.245  Sum_probs=84.3

Q ss_pred             EEEeeccCceEEEEEEecCCCCceEEEEecCCCC--------------------------------------------Ch
Q 018699           53 KGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAF--------------------------------------------PW   88 (351)
Q Consensus        53 ~~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~--------------------------------------------~~   88 (351)
                      .+.||..+.|.|++|+.  .+|+.||||+.++..                                            ..
T Consensus       166 ~~piaaASlaQVhrA~L--~~G~~VaVKVQ~P~l~~~~~~Dl~~~~~~~~~l~k~~p~~~~~~lvdE~~~~L~~ELDF~~  243 (538)
T KOG1235|consen  166 EEPIAAASLAQVHRARL--KNGEDVAVKVQHPGLEKLIMLDLRNLRLLAKVLQKFFPDFDLVWLVDEIAKSLPQELDFTK  243 (538)
T ss_pred             cchhhhcchhheEEEEe--cCCCEEEEEecCcChHHHHHHHHHHHHHHHHHHHHhCcCCchhhHHHHHHhhhHhhcchHH
Confidence            46789999999999995  449999999966431                                            11


Q ss_pred             HHHHHHHHHhhhcccccc-ccccceeeecccCeeEEEEEecCCCCHHHH--HHHHHhhCCChhHHHHHHHHHHHHHHH-H
Q 018699           89 EFYMYRQLDQRISGRERS-SFGFAHRIHLYSDYSILVCDYLSQGTLQDA--INSYVVIGKSMEEVLCIYYTIEMLCIL-E  164 (351)
Q Consensus        89 e~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~lv~e~~~~~sL~~~--l~~~~~~~~~l~~~~~~~i~~qi~~~l-~  164 (351)
                      |.+--..+.+........ .+..+..+........++|||+.|..+.+.  +.+     ..++...+   +..+.++. .
T Consensus       244 EA~Nae~~~~~f~~~~~~~~V~VP~Vy~~~st~RVLtME~~~G~~i~Dl~~i~~-----~gi~~~~i---~~~l~~~~~~  315 (538)
T KOG1235|consen  244 EAKNAERFRENFKDFSLLTYVLVPKVYWDLSTKRVLTMEYVDGIKINDLDAIDK-----RGISPHDI---LNKLVEAYLE  315 (538)
T ss_pred             HHHhHHHHHHHHHhcccccceeCCeehhhcCcceEEEEEecCCccCCCHHHHHH-----cCCCHHHH---HHHHHHHHHH
Confidence            111111111111111100 111222223334567899999998866544  333     23444433   33333332 2


Q ss_pred             HHHHCCceecCCCCCcEEEeecCCcceeeccCCCCCcccCCeEEeecCCcccc
Q 018699          165 SLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSGPWQDQGLCLVDWGRGIDL  217 (351)
Q Consensus       165 ~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~~~~~~~~~~~~l~Dfg~a~~~  217 (351)
                      -+=..|++|+|-.|.||++..+..             .++.+.+.|||+...+
T Consensus       316 qIf~~GffHaDPHPGNilv~~~~~-------------~~~~ivllDhGl~~~i  355 (538)
T KOG1235|consen  316 QIFKTGFFHADPHPGNILVRPNPE-------------GDEEIVLLDHGLYAVI  355 (538)
T ss_pred             HHHhcCCccCCCCCCcEEEecCCC-------------CCccEEEEcccccccc
Confidence            233568999999999999995442             4677899999987643

>TIGR02172 Fb_sc_TIGR02172 Fibrobacter succinogenes paralogous family TIGR02172

Probab=98.11  E-value=7.6e-05  Score=63.95  Aligned_cols=73  Identities=12%  Similarity=0.099  Sum_probs=40.3

Q ss_pred             EEeeccCceEEEEEEecCCCCceEEEEecCCCCChH-HHHHHHHHhhhccccccccccceeeecccCeeEEEEEecCCCC
Q 018699           54 GCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFPWE-FYMYRQLDQRISGRERSSFGFAHRIHLYSDYSILVCDYLSQGT  132 (351)
Q Consensus        54 ~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~~~e-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~s  132 (351)
                      ..||.|..+.||+..     +..+++|......... ...+.+......... ...+.+..+....+...+|||+++|.+
T Consensus         7 ~~i~~G~t~~~y~~~-----~~~~VlR~~~~~~~~~~i~~E~~~l~~l~~~g-lpvP~~~~~~~~~~~~glv~e~i~G~~   80 (226)
T TIGR02172         7 TQTGEGGNGESYTHK-----TGKWMLKLYNPGFDKETIKREFDASRKVFSLG-IPTPHPFDLVEDGGRLGLIYELIVGKR   80 (226)
T ss_pred             eeecCCCCcceeEec-----CCCEEEEeCCCCCCHHHHHHHHHHHHHHHHcC-CCCCceEEEEecCCeeeeeeeecCCcc
Confidence            578999999999842     3457899987643221 111111112111111 112333444445666788999998863

This model describes a paralogous family of five proteins, likely to be enzymes, in the rumen bacterium Fibrobacter succinogenes S85. Members show homology to proteins described by PFAM model pfam01636, a phosphotransferase enzyme family associated with resistance to aminoglycoside antibiotics. However, members of this family score below the current trusted and noise cutoffs for pfam01636.

>PF01636 APH: Phosphotransferase enzyme family This family is part of the larger protein kinase superfamily

Probab=97.96  E-value=0.00018  Score=61.69  Aligned_cols=79  Identities=13%  Similarity=0.163  Sum_probs=44.0

Q ss_pred             EEEeeccCceEEEEEEecCCCCceEEEEecCCC-CChHHHHHHHHHhhhcccccccccccee---eecccCeeEEEEEec
Q 018699           53 KGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPA-FPWEFYMYRQLDQRISGRERSSFGFAHR---IHLYSDYSILVCDYL  128 (351)
Q Consensus        53 ~~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~-~~~e~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~lv~e~~  128 (351)
                      ++.|+.|..+.||.+.. ..  +.+++|..... ..........+.+.+..... .++.+..   ........+++|+++
T Consensus         2 i~~l~~G~~n~~~~v~~-~~--~~~vlK~~~~~~~~~~~~~e~~~~~~l~~~~~-pvP~~~~~~~~~~~~~~~~~~~~~i   77 (239)
T PF01636_consen    2 IRPLSGGFSNRVYRVTT-DD--GRYVLKFYRPPDAAERLRREAAVLRQLAEHGI-PVPRVLAFDTSDEFNGFPYLLMEYI   77 (239)
T ss_dssp             EEEEEESSSSEEEEEEE-TT--SEEEEEEESSHHHHHHHHHHHHHHHHHHHTTS-BS--EEEEEEETEETSEEEEEEEEE
T ss_pred             CccCCCCCeeeEEEEEE-CC--cEEEEEEeCCCCCHHHHHHHHHHHHHHHhcCC-CCceEEeecccccccccceEEEEEe
Confidence            57889999999999983 22  47899997765 11111111112222211111 1222222   112234579999999


Q ss_pred             CCCCHHH
Q 018699          129 SQGTLQD  135 (351)
Q Consensus       129 ~~~sL~~  135 (351)
                      +|..+..
T Consensus        78 ~g~~~~~   84 (239)
T PF01636_consen   78 PGRPLDD   84 (239)
T ss_dssp             SSEEHHH
T ss_pred             ccccccc
Confidence            9887777

; InterPro: IPR002575 This entry consists of bacterial antibiotic resistance proteins, which confer resistance to various aminoglycosides they include:- aminoglycoside 3'-phosphotransferase or kanamycin kinase / neomycin-kanamycin phosphotransferase and streptomycin 3''-kinase or streptomycin 3''-phosphotransferase. The aminoglycoside phosphotransferases inactivate aminoglycoside antibiotics via phosphorylation []. The proteins are found in a range of taxonomic groups.; PDB: 2PPQ_A 2Q83_B 3TDV_B 3TDW_A 3I0O_A 3I0Q_A 3I1A_B 3Q2M_A 3HAV_C 2PUI_B ....

>cd05150 APH Aminoglycoside 3'-phosphotransferase (APH)

Probab=97.90  E-value=0.00023  Score=61.77  Aligned_cols=73  Identities=14%  Similarity=0.022  Sum_probs=42.9

Q ss_pred             EeeccCc-eEEEEEEecCCCCceEEEEecCCC----CChHHHHHHHHHhhhccccccccccceeeecccCeeEEEEEecC
Q 018699           55 CAGQGGF-AKVFKAYVNGDPEDVVALKIQKPA----FPWEFYMYRQLDQRISGRERSSFGFAHRIHLYSDYSILVCDYLS  129 (351)
Q Consensus        55 ~lg~G~~-g~V~~a~~~~~~~~~vaiK~~~~~----~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~  129 (351)
                      .|..|.. +.||++. . . +..+++|+....    ...|...++.+...      ...+.+.......+..++|||+++
T Consensus         5 ~~~~g~~~~~v~~~~-~-~-~~~~~vk~~~~~~~~~~~~E~~~l~~l~~~------~~vP~v~~~~~~~~~~~lv~e~i~   75 (244)
T cd05150           5 RVTEGQSGATVYRLD-G-K-NPGLYLKIAPSGPTYELEREAERLRWLAGK------LPVPEVIDYGSDDGRAWLLTSAVP   75 (244)
T ss_pred             ecCCCCCcCeEEEEc-C-C-CCcEEEEecCCCcccchHHHHHHHHHHHhc------CCCCeEEEEEecCCccEEEEEeeC
Confidence            3444555 7899997 2 2 367889987654    33455554444432      122333333333456789999999


Q ss_pred             CCCHHHH
Q 018699          130 QGTLQDA  136 (351)
Q Consensus       130 ~~sL~~~  136 (351)
                      |.++...
T Consensus        76 G~~l~~~   82 (244)
T cd05150          76 GVPAAAL   82 (244)
T ss_pred             CccHhHh
Confidence            8877643

The APH subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). APH catalyzes the transfer of the gamma-phosphoryl group from ATP to aminoglycoside antibiotics such as kanamycin, streptomycin, neomycin, and gentamicin, among others. The aminoglycoside antibiotics target the 30S ribosome and promote miscoding, leading to the production of defective proteins which insert into the bacterial membrane, resulting in membrane damage and the ultimate demise of the bacterium. Phosphorylation of the aminoglycoside antibiotics results in their inactivation, leading to bacterial antibiotic resistance. The APH gene is found on transposons and plasmids and is thought to have originated as a self-defense mechanism used by microorganisms that produce the antibio

>COG2112 Predicted Ser/Thr protein kinase [Signal transduction mechanisms]

Probab=97.86  E-value=0.00012  Score=58.99  Aligned_cols=131  Identities=15%  Similarity=0.197  Sum_probs=81.1

Q ss_pred             eeEEEEEEeeccCceEEEEEEecCCCCceEEEEecCCCCChH-HHHHHHHHhhhccccccccccceeeecccCeeEEEEE
Q 018699           48 KKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFPWE-FYMYRQLDQRISGRERSSFGFAHRIHLYSDYSILVCD  126 (351)
Q Consensus        48 ~~Y~i~~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~~~e-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e  126 (351)
                      ..-++.+.|++|+.|.||++.|.   |..+|+|+-..+.... .+...++.+....    .-+.+..++.  +..++.||
T Consensus        22 ~~~~v~~~L~KG~~s~Vyl~~~~---~~~~a~Kvrr~ds~r~~l~kEakiLeil~g----~~~~p~vy~y--g~~~i~me   92 (201)
T COG2112          22 YELRVEKELAKGTTSVVYLGEWR---GGEVALKVRRRDSPRRNLEKEAKILEILAG----EGVTPEVYFY--GEDFIRME   92 (201)
T ss_pred             hhhhhhhhhhcccccEEEEeecc---CceEEEEEecCCcchhhHHHHHHHHHHhhh----cCCCceEEEe--chhhhhhh
Confidence            34456889999999999999973   4589999977664421 2222222221111    1111122221  22245599


Q ss_pred             ecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCC-CCcEEEeecCCcceeeccCCCCCcccCC
Q 018699          127 YLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFK-PDNLLIRYARDELTVLDHDRSGPWQDQG  205 (351)
Q Consensus       127 ~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~-p~Nill~~~~~~~~~~~~~~~~~~~~~~  205 (351)
                      |+.|..|.+.-...       +...    ...+++...-|-..||-|+.|+ |...++.                 .+..
T Consensus        93 ~i~G~~L~~~~~~~-------~rk~----l~~vlE~a~~LD~~GI~H~El~~~~k~vlv-----------------~~~~  144 (201)
T COG2112          93 YIDGRPLGKLEIGG-------DRKH----LLRVLEKAYKLDRLGIEHGELSRPWKNVLV-----------------NDRD  144 (201)
T ss_pred             hhcCcchhhhhhcc-------cHHH----HHHHHHHHHHHHHhccchhhhcCCceeEEe-----------------cCCc
Confidence            99888888765431       2222    3456666666777899999998 6655555                 3445


Q ss_pred             eEEeecCCcc
Q 018699          206 LCLVDWGRGI  215 (351)
Q Consensus       206 ~~l~Dfg~a~  215 (351)
                      +.|+||..|+
T Consensus       145 ~~iIDFd~At  154 (201)
T COG2112         145 VYIIDFDSAT  154 (201)
T ss_pred             EEEEEccchh
Confidence            8999999875

>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]

Probab=97.86  E-value=9.8e-05  Score=74.79  Aligned_cols=200  Identities=14%  Similarity=0.032  Sum_probs=124.9

Q ss_pred             hccccccccccceeeeccc---C-eeEEEEEecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecC
Q 018699          100 ISGRERSSFGFAHRIHLYS---D-YSILVCDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGD  175 (351)
Q Consensus       100 ~~~~~~~~~~~~~~~~~~~---~-~~~lv~e~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~d  175 (351)
                      .....|.+.+....+....   + ...+..+++...++...++.    -...+.++++.+..++++|++++|+....|.-
T Consensus       236 l~k~~~~n~~~~~~~~le~~~~g~~~~v~~~~~s~~~~~~~~q~----v~~i~~~~~r~~~~~~~~GL~~~h~~~l~~v~  311 (1351)
T KOG1035|consen  236 LSKIAHDNLGGYFVYGLERLFRGIVLDVLQEICSKVELRSLLQS----VGSIPLETLRILHQKLLEGLAYLHSLSLEHVV  311 (1351)
T ss_pred             HHhhccccccceeEEeehhhcchHHHHHHHhhcCccchHHHHhh----ccccCHHHHHHHHHHHhhhHHHHHHhccceeE
Confidence            3344455554444443321   2 22345678888888888887    46789999999999999999999999555543


Q ss_pred             CCCCcEEEeecCCcceeeccCCCCCcccCCeEEe--ecCCccccccCCCCccccccccCCCcccceeccCCCCC--ccch
Q 018699          176 FKPDNLLIRYARDELTVLDHDRSGPWQDQGLCLV--DWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQEKKPWK--FQVD  251 (351)
Q Consensus       176 l~p~Nill~~~~~~~~~~~~~~~~~~~~~~~~l~--Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~--~~~D  251 (351)
                      +...-..-.              .....+.+.++  ||+......   ..........+..+.+||........  ...|
T Consensus       312 L~~s~~~~~--------------~~~~e~~~~~sl~~~~ss~~l~---d~~~~~~~~~~~~~~~~e~~~~~~~~~~r~~d  374 (1351)
T KOG1035|consen  312 LSASSSKES--------------TVDGEGVVAISLSDFDSSKPLP---DNEKSFSDLLAEIRNADEDLKENTAKKSRLTD  374 (1351)
T ss_pred             Eeccccccc--------------ccCccceeecchhhhcccccCC---CcccchhhcCccccccccccccccchhhhhhH
Confidence            333311111              11144445555  777664322   22222233345667888887666555  4479


Q ss_pred             HhHHHHHHHHHHhCccccccccCCCCCceeeecCcchhhhhHHHHHHHHHHHHhcCCCCCChHHHHHHHHHHHHHHhhC
Q 018699          252 TYGLCAIVHMMLHNSYMEIEKKASPDGGLVYLPKLSFKRYWKVELWKSLFTNLLNMSSGNDKEVLQNLQKSFQDYLCSN  330 (351)
Q Consensus       252 iwslG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~~~~~~~~~~~  330 (351)
                      +|++|.....+..|..+-......         ..-++.... ....+.+.+|+.-++++|+++.+++.|+|...-+..
T Consensus       375 L~~lgll~~~~~~~~~i~~~~~~~---------~~~l~~~~~-~~~~d~~~~~~~~~~~~Rl~~~~ll~~~f~~~~~~~  443 (1351)
T KOG1035|consen  375 LWCLGLLLLQLSQGEDISEKSAVP---------VSLLDVLST-SELLDALPKCLDEDSEERLSALELLTHPFLRFPTDN  443 (1351)
T ss_pred             HHHHHHHHhhhhhcCcccccccch---------hhhhccccc-hhhhhhhhhhcchhhhhccchhhhhhchhccccccc
Confidence            999999999999886543321111         111111111 256789999999999999999999999986544443

>PF10707 YrbL-PhoP_reg: PhoP regulatory network protein YrbL; InterPro: IPR019647 This entry represents proteins that are activated by the protein PhoP

Probab=97.78  E-value=0.00094  Score=55.73  Aligned_cols=122  Identities=19%  Similarity=0.200  Sum_probs=79.4

Q ss_pred             EEEeeccCceEEEEEEecCCCCceEEEEecCCCC-------------------Ch----HHHHHHHHHhhhccccccccc
Q 018699           53 KGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAF-------------------PW----EFYMYRQLDQRISGRERSSFG  109 (351)
Q Consensus        53 ~~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~-------------------~~----e~~~~~~~~~~~~~~~~~~~~  109 (351)
                      ...||+|+.-.||.--.    ....+||+..+..                   ..    |......+.. ........+.
T Consensus         6 ~~~i~~G~~R~cy~HP~----dp~~cIKV~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~E~~~y~~l~~-~~~~~~~~i~   80 (199)
T PF10707_consen    6 SDLIAQGGERDCYQHPD----DPNLCIKVMRPDRGERRRPFKRWLKRLRPKSRYRQNRRELRYYKQLSL-RRGVDWSHIP   80 (199)
T ss_pred             CcccccCCCceEEECCC----CCCeEEEEEccccccccccchhHHHhhcccchhHHHHHHHHHHHHHhh-ccCCcccccc
Confidence            35789999999997542    2347899877655                   11    2222222221 2233344566


Q ss_pred             cceeeecccCeeEEEEEecCC------CCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEE
Q 018699          110 FAHRIHLYSDYSILVCDYLSQ------GTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLI  183 (351)
Q Consensus       110 ~~~~~~~~~~~~~lv~e~~~~------~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill  183 (351)
                      .+.++....-..-+|+|.+.+      .+|.+++..     ..+++ .   +...+-.-..+|-+++|+.+|++|.||++
T Consensus        81 r~~G~veT~~G~Glv~e~I~d~dG~~s~TL~~~l~~-----~~~~~-~---~~~~L~~f~~~l~~~~Iv~~dl~~~NIv~  151 (199)
T PF10707_consen   81 RFYGFVETNLGLGLVVELIRDADGNISPTLEDYLKE-----GGLTE-E---LRQALDEFKRYLLDHHIVIRDLNPHNIVV  151 (199)
T ss_pred             cEeEEEecCCceEEEEEEEECCCCCcCccHHHHHHc-----CCccH-H---HHHHHHHHHHHHHHcCCeecCCCcccEEE
Confidence            666777667777888888643      368888854     45655 3   23445566778899999999999999999


Q ss_pred             eecCC
Q 018699          184 RYARD  188 (351)
Q Consensus       184 ~~~~~  188 (351)
                      ...+.
T Consensus       152 ~~~~~  156 (199)
T PF10707_consen  152 QRRDS  156 (199)
T ss_pred             EecCC
Confidence            96654

PhoP controls the expression of a large number of genes that mediate adaptation to low Mg2+ environments and/or virulence in several bacterial species. YbrL is proposed to be acting in a loop activity with PhoP and PrmA analogous to the multi-component loop in Salmonella sp., where the PhoP-dependent PmrD protein activates the regulatory protein PmrA, and the activated PmrA then represses transcription from the PmrD promoter which harbours binding sites for both the PhoP and PmrA proteins. Expression of YrbL is induced in low Mg2+ in a PhoP-dependent fashion and repressed by Fe3+ in a PmrA-dependent manner [].

>KOG2268 consensus Serine/threonine protein kinase [Signal transduction mechanisms; General function prediction only]

Probab=97.61  E-value=5.3e-05  Score=66.70  Aligned_cols=130  Identities=17%  Similarity=0.335  Sum_probs=86.6

Q ss_pred             eeEEEEEEeeccCceEEEEEEecCCCCceEEEEecCC-------------------CCCh----------HHHHHHHHHh
Q 018699           48 KKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKP-------------------AFPW----------EFYMYRQLDQ   98 (351)
Q Consensus        48 ~~Y~i~~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~-------------------~~~~----------e~~~~~~~~~   98 (351)
                      .-|.+.++||-|.-+-||.+-+  ..|++.++|+=+.                   ...|          |+..+..+..
T Consensus        92 ~v~svGnqIGVGKESDIY~v~d--~~G~~~~lK~HRLGRtSFR~Vk~kRDY~r~r~~~sWlyLSRlaa~kEfafmkaL~e  169 (465)
T KOG2268|consen   92 SVESVGNQIGVGKESDIYVVAD--EEGNPLILKLHRLGRTSFRNVKNKRDYLRKRKSGSWLYLSRLAATKEFAFMKALYE  169 (465)
T ss_pred             hhhhhccccccccccceEEEec--CCCCchhHHHHhhhhhhHHHhhhhhhhHhcCCccchhhhHHHHHHHHHHHHHHHHH
Confidence            3477899999999999999983  5578899997220                   0001          1111111111


Q ss_pred             hhccccccccccceeeecccCeeEEEEEecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCC
Q 018699           99 RISGRERSSFGFAHRIHLYSDYSILVCDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKP  178 (351)
Q Consensus        99 ~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p  178 (351)
                               ..++++-....+..++|||++.|-.|...-.-       .+.   ..+...++..+--|..+|+||||.+-
T Consensus       170 ---------~gfpVPkpiD~~RH~Vvmelv~g~Pl~~v~~v-------~d~---~~ly~~lm~~Iv~la~~GlIHgDFNE  230 (465)
T KOG2268|consen  170 ---------RGFPVPKPIDHNRHCVVMELVDGYPLRQVRHV-------EDP---PTLYDDLMGLIVRLANHGLIHGDFNE  230 (465)
T ss_pred             ---------cCCCCCCcccccceeeHHHhhcccceeeeeec-------CCh---HHHHHHHHHHHHHHHHcCceecccch
Confidence                     12222223346778999999988777654321       112   23355677778888999999999999


Q ss_pred             CcEEEeecCCcceeeccCCCCCcccCCeEEeecCCcc
Q 018699          179 DNLLIRYARDELTVLDHDRSGPWQDQGLCLVDWGRGI  215 (351)
Q Consensus       179 ~Nill~~~~~~~~~~~~~~~~~~~~~~~~l~Dfg~a~  215 (351)
                      =||+++                 .++.++++||-...
T Consensus       231 FNimv~-----------------dd~~i~vIDFPQmv  250 (465)
T KOG2268|consen  231 FNIMVK-----------------DDDKIVVIDFPQMV  250 (465)
T ss_pred             heeEEe-----------------cCCCEEEeechHhh
Confidence            999999                 56678999998654

>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]

Probab=97.58  E-value=1.8e-05  Score=75.13  Aligned_cols=242  Identities=15%  Similarity=0.003  Sum_probs=149.8

Q ss_pred             CeeEEEEEEeeccCceEEEEEEecCCCCceEEEEecCCCCChHHHHHHHHHhhhccccccc-cccceeeecccCeeEEEE
Q 018699           47 GKKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFPWEFYMYRQLDQRISGRERSS-FGFAHRIHLYSDYSILVC  125 (351)
Q Consensus        47 ~~~Y~i~~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~~~e~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~lv~  125 (351)
                      ..-|...+-.++|+++.+++.+ ...+...+ .+.+....  +.....++.   .+..+++ .+....-...+++.++.+
T Consensus       241 ~kws~~fh~fvK~altknpKkR-ptaeklL~-h~fvs~~l--~~rl~~eLL---dK~n~P~~~v~~~~d~~~E~~~~i~~  313 (829)
T KOG0576|consen  241 TKWSEFFHNFVKGALTKNPKKR-PTAEKLLQ-HPFVSQTL--SRRLAIELL---DKVNNPNPVVRYLEDYDGEDYLWIPM  313 (829)
T ss_pred             ccchHHHHHHHHHHhcCCCccC-CChhhhee-ceeeccch--hhHHHHHHH---HHccCCCCcccccccCCcccccchhh
Confidence            4567788889999999999998 44443333 55555441  222222222   2223333 222222234467888999


Q ss_pred             EecCCC-CHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeeccCCCCCcccC
Q 018699          126 DYLSQG-TLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSGPWQDQ  204 (351)
Q Consensus       126 e~~~~~-sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~~~~~~~~~  204 (351)
                      +++.++ +....+...   .-.+...+...+...-..+++++|+---+|+|    ||+..                  ++
T Consensus       314 ~i~s~~rs~~~~~~~s---e~~~~~~~~~~~~r~et~~l~~l~~~~~~~~d----~~l~s------------------~~  368 (829)
T KOG0576|consen  314 RICSTGRSSALEMTVS---EIALEQYQFAYPLRKETRPLAELHSSYKVHRD----NILGS------------------EE  368 (829)
T ss_pred             hhhcCCccccccCChh---hHhhhhhhhhhhhhhhcccccccccccccCcc----ccccc------------------cc
Confidence            999776 332222211   12344445556666777889999988777888    77665                  35


Q ss_pred             CeEEeecCCccccccCCCCccccccccCCCcccceeccCCCCCccchHhHHHHHHHHHHhCccccccccCCCC-Cceee-
Q 018699          205 GLCLVDWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQEKKPWKFQVDTYGLCAIVHMMLHNSYMEIEKKASPD-GGLVY-  282 (351)
Q Consensus       205 ~~~l~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~p~~~~~~~~~-~~~~~-  282 (351)
                      ..+..||+.....+   ......+..+++.++|||......+....|.|++|+-..++.-|-+|-........ ..... 
T Consensus       369 ~~~~~~~~v~~~L~---~~~~~~t~~~~~~~~~pev~~~~~~~~~p~~~~~~~~~~~~ap~~pPr~~P~~~~~~~g~~p~  445 (829)
T KOG0576|consen  369 EVKLLDFAVPPQLT---RTMKPRTAIGTPEPLAPEVIQENTIDGCPDSGSLAVSAIQMAPGLPPRSSPPAVLPMIGNGPN  445 (829)
T ss_pred             ccccccccCCcccC---cccccccCCCCCCCCCchhhcccccccCCCccCCCcchhhcCCCCCCCCCCccccCCCCCCCC
Confidence            57889999775433   22345667889999999999999999999999999877788888766544211100 00000 


Q ss_pred             ecCcchhhhhHHHHHHHHHHHHhcCCCCCChHHHHHHHHHH
Q 018699          283 LPKLSFKRYWKVELWKSLFTNLLNMSSGNDKEVLQNLQKSF  323 (351)
Q Consensus       283 ~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~~~~  323 (351)
                      .+...-...|+...-+++...|++..|..|+....++-+.+
T Consensus       446 s~~L~~~~aw~~~~~~~~~~~~~~g~P~~pkv~mgacfsKv  486 (829)
T KOG0576|consen  446 SPMLTDKSAWSPVFHRDFPAPCLNGLPPTPKVHMGACFSKV  486 (829)
T ss_pred             ccccchhhhcCcccccCCcccccCCCCCCCcchhhHHHHHH
Confidence            00011113344222234889999999999999999887655

>KOG2270 consensus Serine/threonine protein kinase involved in cell cycle control [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning]

Probab=97.55  E-value=0.0007  Score=60.87  Aligned_cols=136  Identities=23%  Similarity=0.379  Sum_probs=88.0

Q ss_pred             EEEEEEeeccCceEEEEEEecCCCCceEEEEecCCCC------------------------C------hHHHHHHHHHhh
Q 018699           50 YQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAF------------------------P------WEFYMYRQLDQR   99 (351)
Q Consensus        50 Y~i~~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~------------------------~------~e~~~~~~~~~~   99 (351)
                      -+|..+|..|.-+.||.|.  ..+|..+|||+++.+.                        +      |....++.+.+ 
T Consensus       146 ~~inGCiSTGKEANVYHat--~~dG~~~AIKIYKTSILvFKDRdRYV~GEfRFRhgyck~NPRKMVk~WAEKE~RNLkR-  222 (520)
T KOG2270|consen  146 VEINGCISTGKEANVYHAT--EEDGSEFAIKIYKTSILVFKDRDRYVSGEFRFRHGYCKHNPRKMVKTWAEKEMRNLKR-  222 (520)
T ss_pred             eecccccccCccceeEeee--cCCCceEEEEEEeeeEEEEechhhhccceeeeecccccCCcHHHHHHHHHHHHHHHHH-
Confidence            4567789999999999998  4677889999975321                        0      11111112221 


Q ss_pred             hccccccccccceeeecccCeeEEEEEecCCCCHH-HHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHC-CceecCCC
Q 018699          100 ISGRERSSFGFAHRIHLYSDYSILVCDYLSQGTLQ-DAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDV-GIIHGDFK  177 (351)
Q Consensus       100 ~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~sL~-~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~-~i~H~dl~  177 (351)
                         .....++.+..+..  ....+||+++....-. -.+.     +..++...+..+-.+++.-+.-|-.. ++||.||+
T Consensus       223 ---l~~aGIP~PePIlL--k~hVLVM~FlGrdgw~aPkLK-----d~~ls~~ka~~~Y~~~v~~MR~lY~~c~LVHADLS  292 (520)
T KOG2270|consen  223 ---LNNAGIPCPEPILL--KNHVLVMEFLGRDGWAAPKLK-----DASLSTSKARELYQQCVRIMRRLYQKCRLVHADLS  292 (520)
T ss_pred             ---HHhcCCCCCCceee--ecceEeeeeccCCCCcCcccc-----cccCChHHHHHHHHHHHHHHHHHHHHhceeccchh
Confidence               11223333333332  2347999999432221 1222     34677777888888888888777654 99999999


Q ss_pred             CCcEEEeecCCcceeeccCCCCCcccCCeEEeecCCccc
Q 018699          178 PDNLLIRYARDELTVLDHDRSGPWQDQGLCLVDWGRGID  216 (351)
Q Consensus       178 p~Nill~~~~~~~~~~~~~~~~~~~~~~~~l~Dfg~a~~  216 (351)
                      -=|+++.                  +|.+.|+|-+.+..
T Consensus       293 EfN~Lyh------------------dG~lyiIDVSQSVE  313 (520)
T KOG2270|consen  293 EFNLLYH------------------DGKLYIIDVSQSVE  313 (520)
T ss_pred             hhhheEE------------------CCEEEEEEcccccc
Confidence            9999997                  67799999987754

>PF13095 FTA2: Kinetochore Sim4 complex subunit FTA2

Probab=97.52  E-value=0.0052  Score=51.11  Aligned_cols=33  Identities=27%  Similarity=0.436  Sum_probs=29.3

Q ss_pred             cCeeEEEEEEeeccCc-eEEEEEEecCCCCceEEEEe
Q 018699           46 GGKKYQIKGCAGQGGF-AKVFKAYVNGDPEDVVALKI   81 (351)
Q Consensus        46 ~~~~Y~i~~~lg~G~~-g~V~~a~~~~~~~~~vaiK~   81 (351)
                      .+.+++..+.||.|.. |.||+++.   .|+.+|+|+
T Consensus        35 h~~~I~flefLg~g~~~~~V~kv~I---~g~~YALKl   68 (207)
T PF13095_consen   35 HGDDIEFLEFLGHGSHDGYVFKVEI---DGRIYALKL   68 (207)
T ss_pred             CCCcEeeeeecCCCCceeEEEEEEE---CCeEEEEEE
Confidence            3478999999999999 99999984   467999999

>cd05155 APH_ChoK_like_1 Uncharacterized bacterial proteins with similarity to Aminoglycoside 3'-phosphotransferase (APH) and Choline kinase (ChoK) family members

Probab=97.36  E-value=0.0022  Score=55.34  Aligned_cols=29  Identities=31%  Similarity=0.508  Sum_probs=23.7

Q ss_pred             CceecCCCCCcEEEeecCCcceeeccCCCCCcccCCeEEeecCCcc
Q 018699          170 GIIHGDFKPDNLLIRYARDELTVLDHDRSGPWQDQGLCLVDWGRGI  215 (351)
Q Consensus       170 ~i~H~dl~p~Nill~~~~~~~~~~~~~~~~~~~~~~~~l~Dfg~a~  215 (351)
                      +++|+|+.|.||+++                 .....-|+||+.+.
T Consensus       165 ~l~HGD~~~~Nvlv~-----------------~~~i~giIDw~~a~  193 (235)
T cd05155         165 VWFHGDLAPGNLLVQ-----------------DGRLSAVIDFGCLG  193 (235)
T ss_pred             eEEeCCCCCCcEEEE-----------------CCCEEEEEeCcccC
Confidence            589999999999998                 44445699999763

The APH/ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates, such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides, and macrolides leads to their inactivation and to bacterial antibiotic resista

>cd05153 HomoserineK_II Homoserine Kinase, type II

Probab=97.32  E-value=0.0044  Score=55.39  Aligned_cols=30  Identities=30%  Similarity=0.423  Sum_probs=24.8

Q ss_pred             CCceecCCCCCcEEEeecCCcceeeccCCCCCcccCCeEEeecCCcc
Q 018699          169 VGIIHGDFKPDNLLIRYARDELTVLDHDRSGPWQDQGLCLVDWGRGI  215 (351)
Q Consensus       169 ~~i~H~dl~p~Nill~~~~~~~~~~~~~~~~~~~~~~~~l~Dfg~a~  215 (351)
                      .+++|+|+.|.||+++                 .++.+.|+||+.+.
T Consensus       175 ~~l~HgD~~~~Nil~~-----------------~~~~~~iIDfe~a~  204 (296)
T cd05153         175 RGVIHADLFRDNVLFD-----------------GDELSGVIDFYFAC  204 (296)
T ss_pred             CcCCccCcCcccEEEe-----------------CCceEEEeehhhhc
Confidence            3799999999999999                 44456799999663

Homoserine kinase is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of unusual homoserine kinases, from a subset of bacteria, which have a PK fold. These proteins do not bear any similarity to the GHMP family homoserine kinases present in most bacteria and eukaryotes. Homoserine kinase catalyzes the transfer of the gamma-phosphoryl group from ATP to L-homoserine producing L-homoserine phosphate, an intermediate in the production of the amino acids threonine, methionine, and isoleucine.

>PRK05231 homoserine kinase; Provisional

Probab=97.32  E-value=0.0076  Score=54.51  Aligned_cols=30  Identities=30%  Similarity=0.431  Sum_probs=24.4

Q ss_pred             CCceecCCCCCcEEEeecCCcceeeccCCCCCcccCCeEEeecCCcc
Q 018699          169 VGIIHGDFKPDNLLIRYARDELTVLDHDRSGPWQDQGLCLVDWGRGI  215 (351)
Q Consensus       169 ~~i~H~dl~p~Nill~~~~~~~~~~~~~~~~~~~~~~~~l~Dfg~a~  215 (351)
                      .+++|+|+.|.||+++                 .+....|+||+.+.
T Consensus       187 ~~liHgD~~~~Nil~~-----------------~~~~~~iIDf~~~~  216 (319)
T PRK05231        187 RGVIHADLFRDNVLFE-----------------GDRLSGFIDFYFAC  216 (319)
T ss_pred             cccCCCCCCCCcEEEE-----------------CCceEEEEeccccc
Confidence            3899999999999998                 33345799999763

>PRK09550 mtnK methylthioribose kinase; Reviewed

Probab=97.28  E-value=0.034  Score=51.67  Aligned_cols=30  Identities=20%  Similarity=0.217  Sum_probs=23.0

Q ss_pred             EEEeeccCceEEEEEEecCCCCceEEEEecC
Q 018699           53 KGCAGQGGFAKVFKAYVNGDPEDVVALKIQK   83 (351)
Q Consensus        53 ~~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~   83 (351)
                      .+.||.|....||++.. ...++.|+||.-.
T Consensus        31 ~~elggGn~N~VyrV~~-~~g~~svIVKqa~   60 (401)
T PRK09550         31 AREIGDGNLNLVFRVSD-TEGGKSVIVKQAL   60 (401)
T ss_pred             eeEcCCCceEEEEEEEe-CCCCeEEEEEecC
Confidence            46789999999999994 3333579999743

>PLN02876 acyl-CoA dehydrogenase

Probab=97.22  E-value=0.0054  Score=62.86  Aligned_cols=32  Identities=19%  Similarity=0.170  Sum_probs=21.2

Q ss_pred             EEEeeccCceEEEEEEecCCC-CceEEEEecCC
Q 018699           53 KGCAGQGGFAKVFKAYVNGDP-EDVVALKIQKP   84 (351)
Q Consensus        53 ~~~lg~G~~g~V~~a~~~~~~-~~~vaiK~~~~   84 (351)
                      ++.++.|.++.+|+..+.... ...+++|+...
T Consensus        43 v~~l~gG~sn~ty~l~~~~~~~~~~~VLR~~p~   75 (822)
T PLN02876         43 VSQFGHGQSNPTFLLEVGNGGSVKRYVLRKKPP   75 (822)
T ss_pred             EEEeCCCCcCceEEEEECCCCcceeEEEEeCCC
Confidence            577788999999998742211 13567777543

>TIGR00938 thrB_alt homoserine kinase, Neisseria type

Probab=97.17  E-value=0.0078  Score=54.16  Aligned_cols=30  Identities=33%  Similarity=0.513  Sum_probs=25.1

Q ss_pred             CCceecCCCCCcEEEeecCCcceeeccCCCCCcccCCeEEeecCCcc
Q 018699          169 VGIIHGDFKPDNLLIRYARDELTVLDHDRSGPWQDQGLCLVDWGRGI  215 (351)
Q Consensus       169 ~~i~H~dl~p~Nill~~~~~~~~~~~~~~~~~~~~~~~~l~Dfg~a~  215 (351)
                      .+++|+|+.+.||+++                 .++.+.|+||+.+.
T Consensus       187 ~~l~HgD~~~~Nvl~~-----------------~~~~~~vIDfd~~~  216 (307)
T TIGR00938       187 RGVIHADLFPDNVLFD-----------------GDSVKGVIDFYFAC  216 (307)
T ss_pred             CccCCCCCCcCcEEEE-----------------CCceEEEeeccccc
Confidence            5899999999999998                 44556899999663

Homoserine kinase is required in the biosynthesis of threonine from aspartate.The member of this family from Pseudomonas aeruginosa was shown by direct assay and complementation to act specifically as a homoserine kinase.

>cd05157 ETNK_euk Ethanolamine kinase (ETNK) in eukaryotes

Probab=97.10  E-value=0.015  Score=49.96  Aligned_cols=30  Identities=13%  Similarity=0.250  Sum_probs=24.5

Q ss_pred             CceecCCCCCcEEEeecCCcceeeccCCCCCcccCCeEEeecCCcc
Q 018699          170 GIIHGDFKPDNLLIRYARDELTVLDHDRSGPWQDQGLCLVDWGRGI  215 (351)
Q Consensus       170 ~i~H~dl~p~Nill~~~~~~~~~~~~~~~~~~~~~~~~l~Dfg~a~  215 (351)
                      +++|+|+.+.||+++.+                ++.+.|+||..|.
T Consensus       171 ~l~H~Dl~~~Nil~~~~----------------~~~~~lIDwe~a~  200 (235)
T cd05157         171 VFCHNDLLSGNIIYNEE----------------KNSVKFIDYEYAG  200 (235)
T ss_pred             EEEcCCCCcCcEEEeCC----------------CCCEEEEEcccCC
Confidence            69999999999999921                3568999998663

ETNK is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major phospholipid, phosphatidylethanolamine (PtdEtn). Unlike ChoK, ETNK shows specific activity for its substrate, and displays negligible activity towards N-methylated derivatives of Etn. The Drosophila ETNK is implicated in development and neuronal function. Mammals contain two ETNK proteins, ETNK1 and ETNK2. ETNK1 selectively increases Etn uptake and phosphorylation, as well as PtdEtn synthesis. ETNK2 is found primarily in the liver and reproductive tissues. It plays a critical role in regulating placental hemostasis to support late embryo

>PF12260 PIP49_C: Protein-kinase domain of FAM69; InterPro: IPR022049 Family with sequence similarity 69 has three members (A, B and C)

Probab=97.07  E-value=0.013  Score=48.50  Aligned_cols=73  Identities=22%  Similarity=0.255  Sum_probs=57.2

Q ss_pred             EEEEEecCCCCHHHH---HHHHHhhCCChhHHHHHHHHHHHHHHHHHHHH---CCceecCCCCCcEEEeecCCcceeecc
Q 018699          122 ILVCDYLSQGTLQDA---INSYVVIGKSMEEVLCIYYTIEMLCILESLHD---VGIIHGDFKPDNLLIRYARDELTVLDH  195 (351)
Q Consensus       122 ~lv~e~~~~~sL~~~---l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~---~~i~H~dl~p~Nill~~~~~~~~~~~~  195 (351)
                      +++.||...+++...   +..    -..-++.....|+.+++..+.+|+.   ..+..+|++|+|+.++           
T Consensus        32 ~~v~E~~~~~~~~~~~~~l~~----~~~~~w~~R~~iA~~lL~~l~~l~~~~~~~~~lcDv~~~nfgv~-----------   96 (188)
T PF12260_consen   32 FYVVEYVGAGSLYGIYRPLSQ----FLQSPWEQRAKIALQLLELLEELDHGPLGFFYLCDVSPDNFGVN-----------   96 (188)
T ss_pred             EEEEEeecCcccccccccccc----ccccCHHHHHHHHHHHHHHHHHHhcCCCCcEEEeecchHHeEEe-----------
Confidence            578899976655421   111    1235788889999999999999998   4688999999999999           


Q ss_pred             CCCCCcccCCeEEeecCCcc
Q 018699          196 DRSGPWQDQGLCLVDWGRGI  215 (351)
Q Consensus       196 ~~~~~~~~~~~~l~Dfg~a~  215 (351)
                            .++.++++|...+.
T Consensus        97 ------~~~~lk~iDld~v~  110 (188)
T PF12260_consen   97 ------DDGRLKLIDLDDVF  110 (188)
T ss_pred             ------CCCcEEEEechhcc
Confidence                  67789999998664

Proteins in this uncharacterised family are described as transmembrane proteins.

>KOG1826 consensus Ras GTPase activating protein RasGAP/neurofibromin [Defense mechanisms]

Probab=96.74  E-value=0.00011  Score=76.49  Aligned_cols=137  Identities=9%  Similarity=-0.072  Sum_probs=105.8

Q ss_pred             cCeeEEEEEecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHC-----CceecCCCCCcEEEeecCCccee
Q 018699          118 SDYSILVCDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDV-----GIIHGDFKPDNLLIRYARDELTV  192 (351)
Q Consensus       118 ~~~~~lv~e~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~-----~i~H~dl~p~Nill~~~~~~~~~  192 (351)
                      ....+..++++.+|.+.+.+-+..+....+...-+....++.+....-+|+.     -.+|.++++.|.++.        
T Consensus      1303 s~ee~~r~~~~~~g~~f~iIikg~ee~~~ld~~~v~~~~kvsvl~~~~~ls~tnlg~T~v~~~Lkf~lpmIV-------- 1374 (2724)
T KOG1826|consen 1303 STEEYIRSLYVEFGKLFSIIIKGLEESPDLDRSPVHLRHKVSVLNRNVILSLTNLGNTNVSKSLKFTLPMIV-------- 1374 (2724)
T ss_pred             ChHHHHHHHHHHHhHHHHHHHhccccCCcchhchHHHHHHHHHhccchhhhcccCCccchhhhhhhhcccee--------
Confidence            3455788999999999999887654445566666655555557777777765     267999999999999        


Q ss_pred             eccCCCCCcccCCeEEeecCCccccccCCCCccccccccCCCcccceeccCCCCCccchHhHHHHHHHHHHhCccccccc
Q 018699          193 LDHDRSGPWQDQGLCLVDWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQEKKPWKFQVDTYGLCAIVHMMLHNSYMEIEK  272 (351)
Q Consensus       193 ~~~~~~~~~~~~~~~l~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~p~~~~  272 (351)
                               .+..+++.++|+.+.  ..+.........+++.|+.|++.....++.++|+|.+|+-+|.+..|..+|...
T Consensus      1375 ---------tny~v~~gk~gLdKI--knp~~sf~Gl~l~sp~~v~qli~N~ik~t~rsdilr~s~~ly~rs~~n~~fi~f 1443 (2724)
T KOG1826|consen 1375 ---------TNYNVKLGKGGLDKI--KNPVLSFFGLELCSPIYVLQLIKNEIKFTKRSDILRRSLSLYLRSDGNAYFIFF 1443 (2724)
T ss_pred             ---------cCCcccccccccccc--cCchHhhhhhhhCCHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHhcccHHHHHH
Confidence                     677799999999862  123334455567888999999998888888899999999999999999888654


Q ss_pred             c
Q 018699          273 K  273 (351)
Q Consensus       273 ~  273 (351)
                      .
T Consensus      1444 l 1444 (2724)
T KOG1826|consen 1444 L 1444 (2724)
T ss_pred             H
Confidence            3

>TIGR02721 ycfN_thiK thiamine kinase

Probab=96.72  E-value=0.0091  Score=52.17  Aligned_cols=28  Identities=29%  Similarity=0.496  Sum_probs=23.5

Q ss_pred             CceecCCCCCcEEEeecCCcceeeccCCCCCcccCCeEEeecCCcc
Q 018699          170 GIIHGDFKPDNLLIRYARDELTVLDHDRSGPWQDQGLCLVDWGRGI  215 (351)
Q Consensus       170 ~i~H~dl~p~Nill~~~~~~~~~~~~~~~~~~~~~~~~l~Dfg~a~  215 (351)
                      .++|+|+.|.||+++                 .++ +.|+||..+.
T Consensus       147 ~l~H~Dl~~~Nil~~-----------------~~~-~~lIDwE~a~  174 (256)
T TIGR02721       147 APLHMDVHAYNLVVT-----------------PQG-LKLIDWEYAS  174 (256)
T ss_pred             eeecCCCCcCcEEEe-----------------CCC-CEEEeccccC
Confidence            589999999999998                 444 6899999763

Members of this family are the ycfN gene product of Escherichia coli, now identified as the salvage enzyme thiamine kinase (thiK), and additional proteobacterial homologs taken to be orthologs with equivalent function.

>COG3173 Predicted aminoglycoside phosphotransferase [General function prediction only]

Probab=96.70  E-value=0.019  Score=51.45  Aligned_cols=30  Identities=30%  Similarity=0.685  Sum_probs=24.7

Q ss_pred             CceecCCCCCcEEEeecCCcceeeccCCCCCcccCCeEEeecCCccc
Q 018699          170 GIIHGDFKPDNLLIRYARDELTVLDHDRSGPWQDQGLCLVDWGRGID  216 (351)
Q Consensus       170 ~i~H~dl~p~Nill~~~~~~~~~~~~~~~~~~~~~~~~l~Dfg~a~~  216 (351)
                      .++|||+.+.|++++                 ..+.+-|+||+.+..
T Consensus       199 ~lvHGD~~~gNlii~-----------------~~~~~gVlDwe~~~l  228 (321)
T COG3173         199 VLVHGDYRPGNLIID-----------------PGRPTGVLDWELATL  228 (321)
T ss_pred             eeeeCCcccCCEEEe-----------------CCCeeEEEecccccc
Confidence            489999999999999                 444478999998753

>cd05156 ChoK_euk Choline Kinase (ChoK) in eukaryotes

Probab=96.16  E-value=0.12  Score=46.25  Aligned_cols=33  Identities=21%  Similarity=0.393  Sum_probs=25.1

Q ss_pred             CceecCCCCCcEEEeecCCcceeeccCCCCCcccCCeEEeecCCcc
Q 018699          170 GIIHGDFKPDNLLIRYARDELTVLDHDRSGPWQDQGLCLVDWGRGI  215 (351)
Q Consensus       170 ~i~H~dl~p~Nill~~~~~~~~~~~~~~~~~~~~~~~~l~Dfg~a~  215 (351)
                      .++|+|+.|.||+++.+..             ..+.+.++||..|.
T Consensus       180 ~lcH~Dl~~~Nil~~~~~~-------------~~~~i~lIDwEya~  212 (302)
T cd05156         180 VFCHNDLQEGNILLLNPSS-------------ETKKLVLIDFEYAS  212 (302)
T ss_pred             eEEecCCCcCeEEecCCCC-------------CCCcEEEEeeCCCC
Confidence            6899999999999983200             13668999999763

The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC) and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. ChoK plays an important role in cell signaling pathways and the regulation of cell growth. Along with PCho, it is involved in malignant transformation through Ras oncogenes in various human cancer

>TIGR01767 MTRK 5-methylthioribose kinase

Probab=96.13  E-value=0.094  Score=47.86  Aligned_cols=26  Identities=23%  Similarity=0.479  Sum_probs=20.5

Q ss_pred             EeeccCceEEEEEEecCCCCceEEEEe
Q 018699           55 CAGQGGFAKVFKAYVNGDPEDVVALKI   81 (351)
Q Consensus        55 ~lg~G~~g~V~~a~~~~~~~~~vaiK~   81 (351)
                      .||.|....||++. ....++-|+||.
T Consensus         2 EigdGnlN~VfrV~-~~~g~~svIVKQ   27 (370)
T TIGR01767         2 EVGDGNLNLVFHVY-DQEGDRAAIVKQ   27 (370)
T ss_pred             cCCCCceEEEEEEE-cCCCCeeEEEEE
Confidence            57999999999999 443336799996

This enzyme is involved in the methionine salvage pathway in certain bacteria.

>COG5072 ALK1 Serine/threonine kinase of the haspin family [Cell division and chromosome partitioning]

Probab=96.13  E-value=0.019  Score=51.84  Aligned_cols=103  Identities=16%  Similarity=0.179  Sum_probs=69.0

Q ss_pred             cCeeEEEEEecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHC-CceecCCCCCcEEEeecCCcceeeccC
Q 018699          118 SDYSILVCDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDV-GIIHGDFKPDNLLIRYARDELTVLDHD  196 (351)
Q Consensus       118 ~~~~~lv~e~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~-~i~H~dl~p~Nill~~~~~~~~~~~~~  196 (351)
                      .-+.|++|++. |++|.-.        ..-..+++..++.+.+..+.-+..+ .+-|+++..+||+++            
T Consensus       298 ~~y~yl~~kdh-gt~is~i--------k~~~~~e~lsff~s~~sil~~lekkf~fehrnlt~~niLId------------  356 (488)
T COG5072         298 TLYLYLHFKDH-GTPISII--------KADRSEEELSFFWSCISILDILEKKFPFEHRNLTLDNILID------------  356 (488)
T ss_pred             ceEEEEEEecC-Cceeeee--------ecccHHHHHHHHHHHHHHHhhhhhcCCcccccccccceeee------------
Confidence            44668889888 7776543        2234567777888888777777765 788999999999998            


Q ss_pred             CCCCcccCCeEEeecCCccccccCCCCccccccccCCCcccceeccCCCCCccchHhHH
Q 018699          197 RSGPWQDQGLCLVDWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQEKKPWKFQVDTYGL  255 (351)
Q Consensus       197 ~~~~~~~~~~~l~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Diwsl  255 (351)
                            +|++.|+||.+++...  +.+.     ......--|-.+.|.. +..-+||-+
T Consensus       357 ------~GnvtLIDfklsRl~~--~q~~-----isy~rldhp~lF~G~d-d~QFeIYrl  401 (488)
T COG5072         357 ------EGNVTLIDFKLSRLSY--SQGI-----ISYNRLDHPDLFNGVD-DYQFEIYRL  401 (488)
T ss_pred             ------cCceEEEEeeeeeccc--CCce-----eeccccCchhhhcCcc-ceeeeHHHH
Confidence                  5679999999997321  1111     1122233455555544 677788764

>COG2334 Putative homoserine kinase type II (protein kinase fold) [General function prediction only]

Probab=96.02  E-value=0.15  Score=46.13  Aligned_cols=43  Identities=35%  Similarity=0.561  Sum_probs=30.2

Q ss_pred             HHHHHHHHHHHHC--------C--ceecCCCCCcEEEeecCCcceeeccCCCCCcccCCeEEeecCCcc
Q 018699          157 IEMLCILESLHDV--------G--IIHGDFKPDNLLIRYARDELTVLDHDRSGPWQDQGLCLVDWGRGI  215 (351)
Q Consensus       157 ~qi~~~l~~LH~~--------~--i~H~dl~p~Nill~~~~~~~~~~~~~~~~~~~~~~~~l~Dfg~a~  215 (351)
                      .++...+..+.+.        +  ++|+|+.|+||+++.++.                ...++||+.+.
T Consensus       175 a~~~~~~~~~~~~~~~~lp~~~~~iIH~D~~~~NVl~d~~~~----------------~~g~iDFdDa~  227 (331)
T COG2334         175 AALLAALDRLLARLPAHLPALGDQIIHGDLHPDNVLFDDDTD----------------VSGFIDFDDAG  227 (331)
T ss_pred             HHHHHHHHHHHhhchhhCCcccceeeecCCCccceeEcCCCC----------------eeeEEEccccc
Confidence            3444455555543        3  999999999999994321                36799999663

>PLN02756 S-methyl-5-thioribose kinase

Probab=95.90  E-value=0.19  Score=46.70  Aligned_cols=29  Identities=14%  Similarity=0.127  Sum_probs=22.2

Q ss_pred             EEEEeeccCceEEEEEEecCCCCceEEEEecC
Q 018699           52 IKGCAGQGGFAKVFKAYVNGDPEDVVALKIQK   83 (351)
Q Consensus        52 i~~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~   83 (351)
                      -.+.||.|....||+..+  . ++.++||.-.
T Consensus        36 ~~~eiggGn~N~VyrV~~--~-~~svVVKqa~   64 (418)
T PLN02756         36 KIKEVGDGNLNFVYIVVS--S-SGSFVIKQAL   64 (418)
T ss_pred             eEEEcCCCceeeEEEEEc--C-CccEEEEeCC
Confidence            477889999999999983  2 3458898744

>KOG1236 consensus Predicted unusual protein kinase [General function prediction only]

Probab=95.81  E-value=0.049  Score=50.07  Aligned_cols=66  Identities=23%  Similarity=0.241  Sum_probs=49.3

Q ss_pred             cCeeEEEEEecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHH-HCCceecCCCCCcEEEeecCC
Q 018699          118 SDYSILVCDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLH-DVGIIHGDFKPDNLLIRYARD  188 (351)
Q Consensus       118 ~~~~~lv~e~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH-~~~i~H~dl~p~Nill~~~~~  188 (351)
                      .....++-+|.+|.++..++..     ...+++....++.-.+.|+-.+- -.+++|.|+.|.||++...+.
T Consensus       317 ~~~~vl~E~~~~Gl~v~~~v~~-----~~~pe~l~kkva~lg~~AllkMl~vDNFvHaDlHPGNVlirf~~t  383 (565)
T KOG1236|consen  317 HTDLVLVETYERGLSVLRFVKW-----KSQPEALVKKVAKLGVNALLKMLIVDNFVHADLHPGNVLIRFNKT  383 (565)
T ss_pred             cccceeeeeccccccHHhhhhc-----ccChHHHHHHHHHHHHHHHHHHHHhhcceecccCCCcEEEEecCC
Confidence            3444677788889899998876     45566666677766666665554 458999999999999996554

>TIGR02904 spore_ysxE spore coat protein YsxE

Probab=95.60  E-value=0.24  Score=44.55  Aligned_cols=29  Identities=14%  Similarity=0.445  Sum_probs=25.1

Q ss_pred             CceecCCCCCcEEEeecCCcceeeccCCCCCcccCCeEEeecCCcc
Q 018699          170 GIIHGDFKPDNLLIRYARDELTVLDHDRSGPWQDQGLCLVDWGRGI  215 (351)
Q Consensus       170 ~i~H~dl~p~Nill~~~~~~~~~~~~~~~~~~~~~~~~l~Dfg~a~  215 (351)
                      +++|+|+.++|++++                 .++.+.++||..+.
T Consensus       197 ~lcHgD~~~~Nvl~~-----------------~~~~~~iIDfd~~~  225 (309)
T TIGR02904       197 VLVHGKLSLSHFLYD-----------------ETRGGYFINFEKAS  225 (309)
T ss_pred             eeeCCCCcHHhEEEc-----------------CCCCEEEEEhhhcc
Confidence            799999999999998                 55668899998664

Members of this family are homologs of the Bacillus subtilis spore coat protein CotS. Members of this family, designated YsxE, are found only in the family Bacillaceae, from among the endospore-forming members of the Firmicutes branch of the Bacteria. As a rule, the ysxE gene is found immediately downstream of spoVID, a gene necessary for spore coat assembly. The protein has been shown to be part of the spore coat.

>PLN02236 choline kinase

Probab=95.57  E-value=0.21  Score=45.75  Aligned_cols=29  Identities=21%  Similarity=0.542  Sum_probs=24.1

Q ss_pred             CceecCCCCCcEEEeecCCcceeeccCCCCCcccCCeEEeecCCc
Q 018699          170 GIIHGDFKPDNLLIRYARDELTVLDHDRSGPWQDQGLCLVDWGRG  214 (351)
Q Consensus       170 ~i~H~dl~p~Nill~~~~~~~~~~~~~~~~~~~~~~~~l~Dfg~a  214 (351)
                      .++|+|+++.||+++.                .++.+.++||..+
T Consensus       201 ~~cH~Dl~~~Nil~~~----------------~~~~~~lID~Eya  229 (344)
T PLN02236        201 GFCHNDLQYGNIMIDE----------------ETRAITIIDYEYA  229 (344)
T ss_pred             eEEeCCCCcCcEEEeC----------------CCCcEEEEeehhc
Confidence            5899999999999982                2356899999876

>PRK10593 hypothetical protein; Provisional

Probab=95.37  E-value=0.17  Score=45.31  Aligned_cols=104  Identities=9%  Similarity=0.047  Sum_probs=60.5

Q ss_pred             EEEEEEeeccCceEEEEEEecCCCCceEEEEecCCC-C----ChHHHHHHHHHhhhccccccccccceeeec---ccCee
Q 018699           50 YQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPA-F----PWEFYMYRQLDQRISGRERSSFGFAHRIHL---YSDYS  121 (351)
Q Consensus        50 Y~i~~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~-~----~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~  121 (351)
                      -.-.+.||.|..+.||....  .++ .+++|..+.. .    ..|...++.+...    ....++.+..+..   ..+..
T Consensus        16 ~~~~~~i~~G~~~~vy~~~~--~~~-~~~~k~~~~~~~~~~~~~Ea~~L~~L~~~----~~vpVP~V~~~~~~~~~~g~~   88 (297)
T PRK10593         16 LSRVECISEQPYAALWALYD--SQG-NPMPLMARSFSTPGVAQQEAWKLSMLARS----GTVRMPTVYGVMTHEQSPGPD   88 (297)
T ss_pred             hheeeecCCccceeEEEEEc--CCC-CEEEEEecccccchHHHHHHHHHHHHccC----CCCCcCcEEEEeccCCcCCCe
Confidence            34467899999999999872  223 3666775431 1    2233334333321    1112233333222   24668


Q ss_pred             EEEEEecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHC
Q 018699          122 ILVCDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDV  169 (351)
Q Consensus       122 ~lv~e~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~  169 (351)
                      ++|||+++|.++.+.  .       .+......+..+++.+++.||+.
T Consensus        89 ~LVmE~i~G~~~~~~--~-------~~~~~~~~l~~~l~~~La~LH~~  127 (297)
T PRK10593         89 VLLLERLRGVSVEAP--A-------RTPERWEQLKDQIVEGLLAWHRI  127 (297)
T ss_pred             EEEEeccCCEecCCC--C-------CCHHHHHHHHHHHHHHHHHHhCC
Confidence            999999998877651  0       12233445567888899999975

>PRK11768 serine/threonine protein kinase; Provisional

Probab=95.31  E-value=0.6  Score=42.39  Aligned_cols=28  Identities=36%  Similarity=0.564  Sum_probs=22.6

Q ss_pred             CCceecCCCCCcEEEeecCCcceeeccCCCCCcccCCeEEeecCCcc
Q 018699          169 VGIIHGDFKPDNLLIRYARDELTVLDHDRSGPWQDQGLCLVDWGRGI  215 (351)
Q Consensus       169 ~~i~H~dl~p~Nill~~~~~~~~~~~~~~~~~~~~~~~~l~Dfg~a~  215 (351)
                      .+++|+|+.+.||+++                 .  .+.|+||+.+.
T Consensus       196 ~~liHgD~h~~NvL~~-----------------d--~~~iIDFDd~~  223 (325)
T PRK11768        196 LLRLHGDCHPGNILWR-----------------D--GPHFVDLDDAR  223 (325)
T ss_pred             ccceecCCCchhcccc-----------------C--CcEEEeCCCCC
Confidence            3789999999999996                 2  25789999663

>cd05152 MPH2' Macrolide 2'-Phosphotransferase (MPH2')

Probab=95.24  E-value=0.13  Score=45.40  Aligned_cols=29  Identities=34%  Similarity=0.776  Sum_probs=23.1

Q ss_pred             CceecCCCCCcEEEeecCCcceeeccCCCCCcccCC-eEEeecCCcc
Q 018699          170 GIIHGDFKPDNLLIRYARDELTVLDHDRSGPWQDQG-LCLVDWGRGI  215 (351)
Q Consensus       170 ~i~H~dl~p~Nill~~~~~~~~~~~~~~~~~~~~~~-~~l~Dfg~a~  215 (351)
                      .++|+|++|.||+++                 .++. .-|+||+.+.
T Consensus       186 ~lvHGD~~~~Nilv~-----------------~~~~~~gviDWe~a~  215 (276)
T cd05152         186 VLVHGDLHPGHILID-----------------EDARVTGLIDWTEAK  215 (276)
T ss_pred             eeEeCCCCCCcEEEe-----------------CCCCEEEEECcHhcc
Confidence            489999999999998                 3233 4699999774

MPH2' is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). MPH2' catalyzes the transfer of the gamma-phosphoryl group from ATP to the 2'-hydroxyl of macrolide antibiotics such as erythromycin, clarithromycin, and azithromycin, among others. Macrolides penetrate the bacterial cell and bind to ribosomes, where it interrupts protein elongation, leading ultimately to the demise of the bacterium. Phosphorylation of macrolides leads to their inactivation. Based on substrate specificity and amino acid sequence, MPH2' is divided into types I and II, encoded by mphA and mphB genes, respectively. MPH2'I inactivates 14-membered ring macrolides while MPH2'II inactivates both 14- and 16-membered ring macrolides. Enzymatic inactivation of macrolides has been reported

>PRK12396 5-methylribose kinase; Reviewed

Probab=95.13  E-value=0.17  Score=46.81  Aligned_cols=28  Identities=21%  Similarity=0.265  Sum_probs=22.3

Q ss_pred             EEEeeccCceEEEEEEecCCCCceEEEEe
Q 018699           53 KGCAGQGGFAKVFKAYVNGDPEDVVALKI   81 (351)
Q Consensus        53 ~~~lg~G~~g~V~~a~~~~~~~~~vaiK~   81 (351)
                      .+.||.|.-..||++.+ ...++-|+||.
T Consensus        34 ~~eigdGnlN~VfrV~~-~~~~~svIVKQ   61 (409)
T PRK12396         34 CKEIGDGNLNYVFRVWD-EQKNISVIVKQ   61 (409)
T ss_pred             eeEcCCCceEEEEEEee-CCCCceEEEEe
Confidence            67889999999999984 33346788986

>KOG1093 consensus Predicted protein kinase (contains TBC and RHOD domains) [General function prediction only]

Probab=95.04  E-value=0.087  Score=49.86  Aligned_cols=75  Identities=12%  Similarity=0.014  Sum_probs=47.2

Q ss_pred             ccchHhHHHHHHHHHHhCccccccccCCCC-----------CceeeecCcchhhhhHHHHHHHHHHHHhcCCCCCChHHH
Q 018699          248 FQVDTYGLCAIVHMMLHNSYMEIEKKASPD-----------GGLVYLPKLSFKRYWKVELWKSLFTNLLNMSSGNDKEVL  316 (351)
Q Consensus       248 ~~~DiwslG~il~~l~~g~~p~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~  316 (351)
                      +++||||+|.++.++..|...+........           ...........-....+..+.++...|+-..|..||...
T Consensus       110 pKsdVwsl~~i~~el~L~~~l~~~~~~s~~l~~i~k~~~~d~~~~~~a~e~~~~~~~d~~~~~~~~~c~~~~~~ir~l~~  189 (725)
T KOG1093|consen  110 PKSDVWSLGFIILELYLGISLEAELTESEYLEILLKYYTDDQELLSTAMEHLIQLLADKKRLPLLKKCLWLEPIIRPLPM  189 (725)
T ss_pred             cchhhhhHHHHHHHHHHhhHHHHHHHHHHHHHHHHHhccCchhHHHHHHHHHHHHhhhHhHHHHhccCCccccccccchh
Confidence            489999999999999999866543322200           000000000000001116677899999999999999888


Q ss_pred             HHHHHH
Q 018699          317 QNLQKS  322 (351)
Q Consensus       317 e~l~~~  322 (351)
                      +...+.
T Consensus       190 ~~~k~~  195 (725)
T KOG1093|consen  190 ELSKRC  195 (725)
T ss_pred             HHhcCc
Confidence            777765

>PF03881 Fructosamin_kin: Fructosamine kinase; InterPro: IPR016477 Ketosamines derive from a non-enzymatic reaction between a sugar and a protein []

Probab=94.58  E-value=0.95  Score=40.24  Aligned_cols=74  Identities=14%  Similarity=0.144  Sum_probs=39.5

Q ss_pred             EEEEEeeccCceEEEEEEecCCCCceEEEEecCCC----CChHHHHHHHHHhhhccccccccccceeeecccCeeEEEEE
Q 018699           51 QIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPA----FPWEFYMYRQLDQRISGRERSSFGFAHRIHLYSDYSILVCD  126 (351)
Q Consensus        51 ~i~~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~----~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e  126 (351)
                      +-.+.++.|.-+.+|+..   .+++.+.+|+-...    +..|..-++.+...    .....+.+..+....+..|+|||
T Consensus        20 ~~~~~v~GG~i~~a~~~~---~~~~~~FvK~~~~~~~~~f~~Ea~gL~~L~~~----~~~~vP~vi~~G~~~~~~fLlle   92 (288)
T PF03881_consen   20 TSIEPVSGGDINEAYRLD---TDGGSYFVKVNSESGRDMFEGEAEGLKALAEA----NPIRVPKVIAWGEYDDDAFLLLE   92 (288)
T ss_dssp             -EEEEE--SSSSEEEEEE---TTS-EEEEEEEEGGGCCHHHHHHHHHHHHCHT----TTSBS--EEEEEE-SSCCEEEEE
T ss_pred             eeeEecCCCChhheEEEE---CCCccEEEEecChhhHHHHHHHHHHHHHHHhc----CCCCCCeEEEEEeecCCceEEEE
Confidence            346678888899999987   45677889986533    23355555555332    22234445555555666799999


Q ss_pred             ecCCC
Q 018699          127 YLSQG  131 (351)
Q Consensus       127 ~~~~~  131 (351)
                      |++.+
T Consensus        93 ~l~~~   97 (288)
T PF03881_consen   93 FLEMG   97 (288)
T ss_dssp             -----
T ss_pred             eecCC
Confidence            98755

Ketosamine-3-kinases (KT3K), of which fructosamine-3-kinase (FN3K) is the best-known example, catalyse the phosphorylation of the ketosamine moiety of glycated proteins. The instability of a phosphorylated ketosamine leads to its degradation, and KT3K is thus thought to be involved in protein repair []. The function of the prokaryotic members of this group has not been established. However, several lines of evidence indicate that they may function as fructosamine-3-kinases (FN3K). First, they are similar to characterised FN3K from mouse and human. Second, the Escherichia coli members are found in close proximity on the genome to fructose-6-phosphate kinase (PfkB). Last, FN3K activity has been found in a Anacystis montana (Gloeocapsa montana Kutzing 1843) [], indicating such activity-directly demonstrated in eukaryotes-is nonetheless not confined to eukaryotes. This family includes eukaryotic fructosamine-3-kinase enzymes [] which may initiate a process leading to the deglycation of fructoselysine and of glycated proteins and in the phosphorylation of 1-deoxy-1-morpholinofructose, fructoselysine, fructoseglycine, fructose and glycated lysozyme. The family also includes bacterial members that have not been characterised but probably have a similar or identical function. For additional information please see [].; PDB: 3JR1_B 3F7W_A.

>PLN02421 phosphotransferase, alcohol group as acceptor/kinase

Probab=94.43  E-value=0.43  Score=43.41  Aligned_cols=29  Identities=24%  Similarity=0.499  Sum_probs=23.8

Q ss_pred             ceecCCCCCcEEEeecCCcceeeccCCCCCcccCCeEEeecCCcc
Q 018699          171 IIHGDFKPDNLLIRYARDELTVLDHDRSGPWQDQGLCLVDWGRGI  215 (351)
Q Consensus       171 i~H~dl~p~Nill~~~~~~~~~~~~~~~~~~~~~~~~l~Dfg~a~  215 (351)
                      ++|.|+.+.||+++.                .++.++++||..|.
T Consensus       184 ~CHnDl~~~NiL~~~----------------~~~~l~lID~EYag  212 (330)
T PLN02421        184 FAHNDLLSGNLMLNE----------------DEGKLYFIDFEYGS  212 (330)
T ss_pred             EEECCCCcccEEEeC----------------CCCcEEEEcccccC
Confidence            789999999999973                23569999999773

>PRK06148 hypothetical protein; Provisional

Probab=94.21  E-value=1.2  Score=46.89  Aligned_cols=33  Identities=24%  Similarity=0.445  Sum_probs=24.2

Q ss_pred             CCceecCCCCCcEEEeecCCcceeeccCCCCCcccCCeEEeecCCcc
Q 018699          169 VGIIHGDFKPDNLLIRYARDELTVLDHDRSGPWQDQGLCLVDWGRGI  215 (351)
Q Consensus       169 ~~i~H~dl~p~Nill~~~~~~~~~~~~~~~~~~~~~~~~l~Dfg~a~  215 (351)
                      .+++|+|+++.||+++.+..              ....-|+|||-+.
T Consensus       203 ~~vIHgDln~~NiLv~~~~~--------------~~isGiIDFgDa~  235 (1013)
T PRK06148        203 AQVIHNDANDYNILVDADDG--------------ERISGLIDFGDAV  235 (1013)
T ss_pred             cceECCCCCcccEEEcCCCC--------------cceEEEEECcccc
Confidence            47999999999999994321              1223499999664

>PHA03111 Ser/Thr kinase; Provisional

Probab=93.46  E-value=0.19  Score=44.99  Aligned_cols=75  Identities=17%  Similarity=0.214  Sum_probs=44.7

Q ss_pred             CCChhHHHHHHHHHHHHHHHHHHHH----CCceecCCCCCcEEEeecCCcceeeccCCCC-CcccCCeEEeecCCccccc
Q 018699          144 GKSMEEVLCIYYTIEMLCILESLHD----VGIIHGDFKPDNLLIRYARDELTVLDHDRSG-PWQDQGLCLVDWGRGIDLH  218 (351)
Q Consensus       144 ~~~l~~~~~~~i~~qi~~~l~~LH~----~~i~H~dl~p~Nill~~~~~~~~~~~~~~~~-~~~~~~~~l~Dfg~a~~~~  218 (351)
                      |..--.+-++.++.||+.-.-..-+    ..++|-||||+||++.+.+....+--.+.+- -.+.-..+|.||.+++..+
T Consensus       273 GF~s~~~YikfifLQiaLLyikIYelp~c~nF~H~DLKPdNILiFds~~~i~I~~~~~~~vF~Epi~~~LnDFDfSqv~~  352 (444)
T PHA03111        273 GFKSLVEYIKFIFLQIALLYIKIYELPCCDNFLHVDLKPDNILIFDSDEPISITLKDATYVFNEPIKACLNDFDFSQVAN  352 (444)
T ss_pred             CCccHHHHHHHHHHHHHHHHHhhhcCCCcceeeeccCCCCcEEEecCCCcEEEEECCeEEEeccchhhhhcccCHHHHcc
Confidence            3333455677888888776644433    3699999999999999665333221111000 1123346778888876533

>PF05445 Pox_ser-thr_kin: Poxvirus serine/threonine protein kinase; InterPro: IPR008790 This family of proteins contain poxvirus serine/threonine protein kinases, which are essential for phosphorylation of virion proteins during virion assembly

Probab=93.39  E-value=0.17  Score=45.54  Aligned_cols=95  Identities=15%  Similarity=0.206  Sum_probs=53.4

Q ss_pred             EEEEEecCC--CCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHH----HCCceecCCCCCcEEEeecCCcceeecc
Q 018699          122 ILVCDYLSQ--GTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLH----DVGIIHGDFKPDNLLIRYARDELTVLDH  195 (351)
Q Consensus       122 ~lv~e~~~~--~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH----~~~i~H~dl~p~Nill~~~~~~~~~~~~  195 (351)
                      .+|++++..  ..+.......  .|..--.+-++.++.||+.-.--.-    ...++|-||||+||++.+......+.-.
T Consensus       247 IIIfPLA~~Sadkv~~~~~~e--~GF~s~~~YvkfifLQiaLLyikIYelp~c~nF~H~DLKPdNILiFds~~~i~I~~~  324 (434)
T PF05445_consen  247 IIIFPLARCSADKVTESNAAE--LGFKSNVEYVKFIFLQIALLYIKIYELPCCTNFLHVDLKPDNILIFDSKEPIRIKFG  324 (434)
T ss_pred             EEEEehhhcchhhcCHHHHHh--cCchhHHHHHHHHHHHHHHHHeeeecCCCcceeeecccCcCcEEEecCCCceEEEEC
Confidence            578887532  2222222221  1444455667778888876542232    3479999999999999966554422211


Q ss_pred             CCCC-CcccCCeEEeecCCccccc
Q 018699          196 DRSG-PWQDQGLCLVDWGRGIDLH  218 (351)
Q Consensus       196 ~~~~-~~~~~~~~l~Dfg~a~~~~  218 (351)
                      +..- -.+.-.++|.||.+++..+
T Consensus       325 ~~~~vF~Epi~~~LnDFDfSqv~~  348 (434)
T PF05445_consen  325 NRNYVFKEPIRCCLNDFDFSQVAN  348 (434)
T ss_pred             CeEEEecccceeeecccCHHHhcc
Confidence            1000 1123346888999886543

; GO: 0004672 protein kinase activity, 0005524 ATP binding

>TIGR02906 spore_CotS spore coat protein, CotS family

Probab=92.70  E-value=0.27  Score=44.12  Aligned_cols=28  Identities=21%  Similarity=0.523  Sum_probs=23.5

Q ss_pred             CCceecCCCCCcEEEeecCCcceeeccCCCCCcccCCeEEeecCCc
Q 018699          169 VGIIHGDFKPDNLLIRYARDELTVLDHDRSGPWQDQGLCLVDWGRG  214 (351)
Q Consensus       169 ~~i~H~dl~p~Nill~~~~~~~~~~~~~~~~~~~~~~~~l~Dfg~a  214 (351)
                      .+++|||+.+.||+++                 . +.+.|+||+.+
T Consensus       187 ~~liHgD~~~~Nil~~-----------------~-~~i~lIDfd~~  214 (313)
T TIGR02906       187 RGFCHQDYAYHNILLK-----------------D-NEVYVIDFDYC  214 (313)
T ss_pred             CceEcCCCCcccEEEe-----------------C-CcEEEEECccc
Confidence            4789999999999998                 3 34789999955

Members of this family include the spore coat proteins CotS and YtaA from Bacillus subtilis and, from other endospore-forming bacteria, homologs that are more closely related to these two than to the spore coat proteins YutH and YsxE. The CotS family is more broadly distributed than YutH or YsxE, but still is not universal among spore-formers.

>PF07387 Seadorna_VP7: Seadornavirus VP7; InterPro: IPR009973 This family consists of several Seadornavirus specific VP7 proteins of around 305 residues in length

Probab=92.07  E-value=0.12  Score=43.66  Aligned_cols=38  Identities=32%  Similarity=0.300  Sum_probs=32.1

Q ss_pred             HHHHHHHHH--CCceecCCCCCcEEEeecCCcceeeccCCCCCcccCCeEEeecCCc
Q 018699          160 LCILESLHD--VGIIHGDFKPDNLLIRYARDELTVLDHDRSGPWQDQGLCLVDWGRG  214 (351)
Q Consensus       160 ~~~l~~LH~--~~i~H~dl~p~Nill~~~~~~~~~~~~~~~~~~~~~~~~l~Dfg~a  214 (351)
                      +.+|.-+|+  .+.+|||..|+||+-|                 +.|.+||.|.++-
T Consensus       151 i~~L~~fH~~~~~~lHGD~np~NiM~D-----------------~~G~lKlVDP~~L  190 (308)
T PF07387_consen  151 IKDLMDFHSENQHCLHGDCNPDNIMCD-----------------KFGYLKLVDPVCL  190 (308)
T ss_pred             HHHHHHhhccCCCeecCCCChhheeec-----------------CCCCEEecChhhh
Confidence            456677784  3799999999999999                 8899999999865

The function of this family is unknown.

>PTZ00384 choline kinase; Provisional

Probab=91.26  E-value=3.6  Score=38.24  Aligned_cols=28  Identities=29%  Similarity=0.395  Sum_probs=22.7

Q ss_pred             CCceecCCCCCcEEEeecCCcceeeccCCCCCcccCCeEEeecCCc
Q 018699          169 VGIIHGDFKPDNLLIRYARDELTVLDHDRSGPWQDQGLCLVDWGRG  214 (351)
Q Consensus       169 ~~i~H~dl~p~Nill~~~~~~~~~~~~~~~~~~~~~~~~l~Dfg~a  214 (351)
                      ..++|.|+-+.||+.+                  +..+.++||..|
T Consensus       227 ~VfCHNDL~~gNIL~~------------------~~~l~lID~EYA  254 (383)
T PTZ00384        227 VLFCHNDLFFTNILDF------------------NQGIYFIDFDFA  254 (383)
T ss_pred             eeeeeccCCcccEEec------------------CCCEEEEEeccc
Confidence            3678999999999875                  234899999866

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	351
3e7e_A	365	Structure And Substrate Recruitment Of The Human Sp		5e-44
2esm_A	415	Crystal Structure Of Rock 1 Bound To Fasudil Length		2e-07
3v8s_A	410	Human Rho-Associated Protein Kinase 1 (Rock 1) In C		2e-07
2f2u_A	402	Crystal Structure Of The Rho-Kinase Kinase Domain L		2e-07
2v55_A	406	Mechanism Of Multi-site Phosphorylation From A Rock		2e-07
3hmn_A	342	Crystal Structure Of Human Mps1 Catalytic Domain In		6e-06
2zmc_A	390	Crystal Structure Of Human Mitotic Checkpoint Kinas		6e-06
2zmd_A	390	Crystal Structure Of Human Mps1 Catalytic Domain T6		6e-06
3dbq_A	343	Crystal Structure Of Ttk Kinase Domain Length = 343		5e-05
2x9e_A	317	Human Mps1 In Complex With Nms-P715 Length = 317		6e-05
3kn5_A	325	Crystal Structure Of The C-Terminal Kinase Domain O		6e-05
2acx_A	576	Crystal Structure Of G Protein Coupled Receptor Kin		2e-04
3nyn_A	576	Crystal Structure Of G Protein-Coupled Receptor Kin		2e-04
3cek_A	313	Crystal Structure Of Human Dual Specificity Protein		2e-04
3h9f_A	313	Crystal Structure Of Human Dual Specificity Protein		2e-04
3vqu_A	320	Crystal Structure Of Human Mps1 Catalytic Domain In		3e-04
2jc6_A	334	Crystal Structure Of Human Calmodulin-Dependent Pro		3e-04
4fg9_A	320	Crystal Structure Of Human Calcium/calmodulin-depen		3e-04
1a06_A	332	Calmodulin-Dependent Protein Kinase From Rat Length		3e-04
4fg8_A	315	Crystal Structure Of Human Calcium/calmodulin-depen		3e-04
3i6u_A	419	Structure And Activation Mechanism Of The Chk2 Dna-		3e-04
2jam_A	304	Crystal Structure Of Human Calmodulin-Dependent Pro		3e-04
3i6w_A	443	Structure And Activation Mechanism Of The Chk2 Dna-		3e-04
2ycr_A	323	Crystal Structure Of Checkpoint Kinase 2 In Complex		4e-04
3qfv_A	415	Mrck Beta In Complex With Tpca-1 Length = 415		4e-04
2w0j_A	323	Crystal Structure Of Chk2 In Complex With Nsc 10955		4e-04
4fg7_A	293	Crystal Structure Of Human Calcium/calmodulin-depen		4e-04
2ycf_A	322	Crystal Structure Of Checkpoint Kinase 2 In Complex		4e-04
2xk9_A	322	Structural Analysis Of Checkpoint Kinase 2 (Chk2) I		4e-04
2cn5_A	329	Crystal Structure Of Human Chk2 In Complex With Adp		4e-04
3ubd_A	304	Structure Of N-Terminal Domain Of Rsk2 Kinase In Co		4e-04
3g51_A	325	Structural Diversity Of The Active Conformation Of		5e-04
3tku_A	433	Mrck Beta In Complex With Fasudil Length = 433		5e-04
4el9_A	305	Structure Of N-Terminal Kinase Domain Of Rsk2 With		5e-04
4a07_A	311	Human Pdk1 Kinase Domain In Complex With Allosteric		6e-04
3txo_A	353	Pkc Eta Kinase In Complex With A Naphthyridine Leng		6e-04
3pwy_A	311	Crystal Structure Of An Extender (Spd28345)-Modifie		6e-04
1uu9_A	286	Structure Of Human Pdk1 Kinase Domain In Complex Wi		6e-04
1h1w_A	289	High Resolution Crystal Structure Of The Human Pdk1		6e-04
3qc4_A	314	Pdk1 In Complex With Dfg-Out Inhibitor Xxx Length =		6e-04
3iop_A	312	Pdk-1 In Complex With The Inhibitor Compound-8i Len		6e-04
2xck_A	309	Crystal Structure Of Pdk1 In Complex With A Pyrazol		6e-04
2r7b_A	312	Crystal Structure Of The Phosphoinositide-Dependent		6e-04
2biy_A	310	Structure Of Pdk1-S241a Mutant Kinase Domain Length		6e-04
3sc1_A	311	Novel Isoquinolone Pdk1 Inhibitors Discovered Throu		6e-04
3nus_A	286	Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fra		6e-04
3hrc_A	311	Crystal Structure Of A Mutant Of Human Pdk1 Kinase		6e-04
3h9o_A	311	Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1)		6e-04
1uu3_A	310	Structure Of Human Pdk1 Kinase Domain In Complex Wi		7e-04
3rwp_A	311	Discovery Of A Novel, Potent And Selective Inhibito		7e-04
2xch_A	309	Crystal Structure Of Pdk1 In Complex With A Pyrazol		7e-04
1z5m_A	286	Crystal Structure Of N1-[3-[[5-bromo-2-[[3-[(1-pyrr		7e-04
3orx_A	316	Pdk1 Mutant Bound To Allosteric Disulfide Fragment		7e-04
3c4x_A	543	Crystal Structure Of G Protein Coupled Receptor Kin		7e-04
3nax_A	311	Pdk1 In Complex With Inhibitor Mp7 Length = 311		7e-04
3c4w_A	543	Crystal Structure Of G Protein Coupled Receptor Kin		7e-04
3t8o_A	543	Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolu		7e-04
3nay_A	311	Pdk1 In Complex With Inhibitor Mp6 Length = 311		7e-04
3nun_A	292	Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lea		8e-04
3a60_A	327	Crystal Structure Of Unphosphorylated P70s6k1 (Form		9e-04
4f99_A	361	Human Cdc7 Kinase In Complex With Dbf4 And Nucleoti		9e-04
3a62_A	327	Crystal Structure Of Phosphorylated P70s6k1 Length		9e-04

>pdb|3E7E|A Chain A, Structure And Substrate Recruitment Of The Human Spindle Checkpoint Kinase Bub Length = 365

Iteration: 1
 Score =  174 bits (442), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 109/304 (35%), Positives = 163/304 (53%), Gaps = 22/304 (7%)
Query: 43  IEIGGKKYQIKGCAGQGGFAKVFKAYVNGDPEDV-----VALKIQKPAFPWEFYMYRQLD 97
            ++G K   +    G+G FA+V++A   GD  D        LK+QKPA PWEFY+  QL 
Sbjct: 60  FQLGSKLVYVHHLLGEGAFAQVYEA-TQGDLNDAKNKQKFVLKVQKPANPWEFYIGTQLM 118
Query: 98  QRISGRERSSFGFAHRIHLYSDYSILVCDYLSQGTLQDAINSYV-VIGKSMEEVLCIYYT 156
           +R+    +  F   +  HL+ + S+LV +  S GTL +AIN Y     K M + L I + 
Sbjct: 119 ERLKPSMQHMFMKFYSAHLFQNGSVLVGELYSYGTLLNAINLYKNTPEKVMPQGLVISFA 178
Query: 157 IEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSGPWQDQGLCLVDWGRGID 216
           + ML ++E +HD  IIHGD KPDN ++     E    D D S      GL L+D G+ ID
Sbjct: 179 MRMLYMIEQVHDCEIIHGDIKPDNFILGNGFLEQDDED-DLSA-----GLALIDLGQSID 232
Query: 217 LHLFPDNMEFEGDCRTSGFRCIEMQEKKPWKFQVDTYGLCAIVHMMLHNSYMEIEKKASP 276
           + LFP    F   C TSGF+C+EM   KPW +Q+D +G+ A V+ ML  +YM+++     
Sbjct: 233 MKLFPKGTIFTAKCETSGFQCVEMLSNKPWNYQIDYFGVAATVYCMLFGTYMKVKN---- 288
Query: 277 DGGLVYLPKLSFKRYWKVELWKSLFTNLLNMSSGNDKEVL----QNLQKSFQDYLCSNPQ 332
           +GG    P+  F+R   +++W   F  +LN+   +    L    Q L+K FQ +  +  +
Sbjct: 289 EGGECK-PEGLFRRLPHLDMWNEFFHVMLNIPDCHHLPSLDLLRQKLKKVFQQHYTNKIR 347
Query: 333 LLKN 336
            L+N
Sbjct: 348 ALRN 351

>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil Length = 415

Iteration: 1
 Score = 53.5 bits (127), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 47/205 (22%), Positives = 91/205 (44%), Gaps = 20/205 (9%)
Query: 41  KTIEIGGKKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFPWEFYMYRQLDQRI 100
           + + +  + Y++    G+G F +V +   +     V A+K+       +F M ++ D   
Sbjct: 67  RDLRMKAEDYEVVKVIGRGAFGEV-QLVRHKSTRKVYAMKLLS-----KFEMIKRSDSAF 120
Query: 101 SGRERSSFGFAHR------IHLYSD--YSILVCDYLSQGTLQDAINSYVVIGKSMEEVLC 152
              ER    FA+        + + D  Y  +V +Y+  G L + +++Y V      E   
Sbjct: 121 FWEERDIMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSNYDV-----PEKWA 175
Query: 153 IYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSGPWQDQGLCLVDWG 212
            +YT E++  L+++H +G IH D KPDN+L+  +   L + D         +G+   D  
Sbjct: 176 RFYTAEVVLALDAIHSMGFIHRDVKPDNMLLDKS-GHLKLADFGTCMKMNKEGMVRCDTA 234
Query: 213 RGIDLHLFPDNMEFEGDCRTSGFRC 237
            G   ++ P+ ++ +G     G  C
Sbjct: 235 VGTPDYISPEVLKSQGGDGYYGREC 259

>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex With Indazole Derivative (Compound 18) Length = 410

Iteration: 1
 Score = 53.5 bits (127), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 47/205 (22%), Positives = 91/205 (44%), Gaps = 20/205 (9%)
Query: 41  KTIEIGGKKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFPWEFYMYRQLDQRI 100
           + + +  + Y++    G+G F +V +   +     V A+K+       +F M ++ D   
Sbjct: 62  RDLRMKAEDYEVVKVIGRGAFGEV-QLVRHKSTRKVYAMKLLS-----KFEMIKRSDSAF 115
Query: 101 SGRERSSFGFAHR------IHLYSD--YSILVCDYLSQGTLQDAINSYVVIGKSMEEVLC 152
              ER    FA+        + + D  Y  +V +Y+  G L + +++Y V      E   
Sbjct: 116 FWEERDIMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSNYDV-----PEKWA 170
Query: 153 IYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSGPWQDQGLCLVDWG 212
            +YT E++  L+++H +G IH D KPDN+L+  +   L + D         +G+   D  
Sbjct: 171 RFYTAEVVLALDAIHSMGFIHRDVKPDNMLLDKS-GHLKLADFGTCMKMNKEGMVRCDTA 229
Query: 213 RGIDLHLFPDNMEFEGDCRTSGFRC 237
            G   ++ P+ ++ +G     G  C
Sbjct: 230 VGTPDYISPEVLKSQGGDGYYGREC 254

>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain Length = 402

Iteration: 1
 Score = 53.1 bits (126), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 47/205 (22%), Positives = 92/205 (44%), Gaps = 20/205 (9%)
Query: 41  KTIEIGGKKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFPWEFYMYRQLDQRI 100
           + +++  + Y +    G+G F +V +   +   + V A+K+       +F M ++ D   
Sbjct: 68  RGLQMKAEDYDVVKVIGRGAFGEV-QLVRHKASQKVYAMKLLS-----KFEMIKRSDSAF 121
Query: 101 SGRERSSFGFAHR---IHLY-----SDYSILVCDYLSQGTLQDAINSYVVIGKSMEEVLC 152
              ER    FA+    + L+       Y  +V +Y+  G L + +++Y V      E   
Sbjct: 122 FWEERDIMAFANSPWVVQLFCAFQDDKYLYMVMEYMPGGDLVNLMSNYDV-----PEKWA 176
Query: 153 IYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSGPWQDQGLCLVDWG 212
            +YT E++  L+++H +G+IH D KPDN+L+      L + D        + G+   D  
Sbjct: 177 KFYTAEVVLALDAIHSMGLIHRDVKPDNMLLD-KHGHLKLADFGTCMKMDETGMVHCDTA 235
Query: 213 RGIDLHLFPDNMEFEGDCRTSGFRC 237
            G   ++ P+ ++ +G     G  C
Sbjct: 236 VGTPDYISPEVLKSQGGDGYYGREC 260

>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe Complex Structure Length = 406

Iteration: 1
 Score = 53.1 bits (126), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 47/205 (22%), Positives = 91/205 (44%), Gaps = 20/205 (9%)
Query: 41  KTIEIGGKKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFPWEFYMYRQLDQRI 100
           + + +  + Y++    G+G F +V +   +     V A+K+       +F M ++ D   
Sbjct: 67  RDLRMKAEDYEVVKVIGRGAFGEV-QLVRHKSTRKVYAMKLLS-----KFEMIKRSDSAF 120
Query: 101 SGRERSSFGFAHR------IHLYSD--YSILVCDYLSQGTLQDAINSYVVIGKSMEEVLC 152
              ER    FA+        + + D  Y  +V +Y+  G L + +++Y V      E   
Sbjct: 121 FWEERDIMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSNYDV-----PEKWA 175
Query: 153 IYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSGPWQDQGLCLVDWG 212
            +YT E++  L+++H +G IH D KPDN+L+  +   L + D         +G+   D  
Sbjct: 176 RFYTAEVVLALDAIHSMGFIHRDVKPDNMLLDKS-GHLKLADFGTCMKMNKEGMVRCDTA 234
Query: 213 RGIDLHLFPDNMEFEGDCRTSGFRC 237
            G   ++ P+ ++ +G     G  C
Sbjct: 235 VGTPDYISPEVLKSQGGDGYYGREC 259

>pdb|3HMN|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In Complex With Atp Length = 342

Iteration: 1
 Score = 48.5 bits (114), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 40/158 (25%), Positives = 70/158 (44%), Gaps = 23/158 (14%)
Query: 36  NSSRNKTIEIGGKKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFPWEFYMYRQ 95
           +SS N+ I + G+ Y I    G GG +KVF+            L  +K  +  ++    +
Sbjct: 44  SSSANECISVKGRIYSILKQIGSGGSSKVFQV-----------LNEKKQIYAIKYVNLEE 92
Query: 96  LDQRISGRERSSFGFAHRIHLYSDYSILVCDY----------LSQGTLQDAINSYVVIGK 145
            D +     R+   + +++  +SD  I + DY          +  G +   +NS++   K
Sbjct: 93  ADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVMECGNID--LNSWLKKKK 150
Query: 146 SMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLI 183
           S++      Y   ML  + ++H  GI+H D KP N LI
Sbjct: 151 SIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLI 188

>pdb|2ZMC|A Chain A, Crystal Structure Of Human Mitotic Checkpoint Kinase Mps1 Catalytic Domain Apo Form Length = 390

Iteration: 1
 Score = 48.1 bits (113), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 40/158 (25%), Positives = 70/158 (44%), Gaps = 23/158 (14%)
Query: 36  NSSRNKTIEIGGKKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFPWEFYMYRQ 95
           +SS N+ I + G+ Y I    G GG +KVF+            L  +K  +  ++    +
Sbjct: 44  SSSANECISVKGRIYSILKQIGSGGSSKVFQV-----------LNEKKQIYAIKYVNLEE 92
Query: 96  LDQRISGRERSSFGFAHRIHLYSDYSILVCDY----------LSQGTLQDAINSYVVIGK 145
            D +     R+   + +++  +SD  I + DY          +  G +   +NS++   K
Sbjct: 93  ADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVMECGNID--LNSWLKKKK 150
Query: 146 SMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLI 183
           S++      Y   ML  + ++H  GI+H D KP N LI
Sbjct: 151 SIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLI 188

>pdb|2ZMD|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain T686a Mutant In Complex With Sp600125 Inhibitor Length = 390

Iteration: 1
 Score = 48.1 bits (113), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 40/158 (25%), Positives = 70/158 (44%), Gaps = 23/158 (14%)
Query: 36  NSSRNKTIEIGGKKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFPWEFYMYRQ 95
           +SS N+ I + G+ Y I    G GG +KVF+            L  +K  +  ++    +
Sbjct: 44  SSSANECISVKGRIYSILKQIGSGGSSKVFQV-----------LNEKKQIYAIKYVNLEE 92
Query: 96  LDQRISGRERSSFGFAHRIHLYSDYSILVCDY----------LSQGTLQDAINSYVVIGK 145
            D +     R+   + +++  +SD  I + DY          +  G +   +NS++   K
Sbjct: 93  ADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVMECGNID--LNSWLKKKK 150
Query: 146 SMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLI 183
           S++      Y   ML  + ++H  GI+H D KP N LI
Sbjct: 151 SIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLI 188

>pdb|3DBQ|A Chain A, Crystal Structure Of Ttk Kinase Domain Length = 343

Iteration: 1
 Score = 45.4 bits (106), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 38/154 (24%), Positives = 67/154 (43%), Gaps = 23/154 (14%)
Query: 40  NKTIEIGGKKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFPWEFYMYRQLDQR 99
           N+ I + G+ Y I    G GG +KVF+            L  +K  +  ++    + D +
Sbjct: 1   NECISVKGRIYSILKQIGSGGSSKVFQV-----------LNEKKQIYAIKYVNLEEADNQ 49
Query: 100 ISGRERSSFGFAHRIHLYSDYSILVCDY----------LSQGTLQDAINSYVVIGKSMEE 149
                R+   + +++  +SD  I + DY          +  G +   +NS++   KS++ 
Sbjct: 50  TLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVMECGNID--LNSWLKKKKSIDP 107
Query: 150 VLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLI 183
                Y   ML  + ++H  GI+H D KP N LI
Sbjct: 108 WERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLI 141

>pdb|2X9E|A Chain A, Human Mps1 In Complex With Nms-P715 Length = 317

Iteration: 1
 Score = 45.1 bits (105), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 38/154 (24%), Positives = 67/154 (43%), Gaps = 23/154 (14%)
Query: 40  NKTIEIGGKKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFPWEFYMYRQLDQR 99
           N+ I + G+ Y I    G GG +KVF+            L  +K  +  ++    + D +
Sbjct: 4   NECISVKGRIYSILKQIGSGGSSKVFQV-----------LNEKKQIYAIKYVNLEEADNQ 52
Query: 100 ISGRERSSFGFAHRIHLYSDYSILVCDY----------LSQGTLQDAINSYVVIGKSMEE 149
                R+   + +++  +SD  I + DY          +  G +   +NS++   KS++ 
Sbjct: 53  TLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVMECGNID--LNSWLKKKKSIDP 110
Query: 150 VLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLI 183
                Y   ML  + ++H  GI+H D KP N LI
Sbjct: 111 WERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLI 144

>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1 In With Amp-Pnp Length = 325

Iteration: 1
 Score = 45.1 bits (105), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 35/144 (24%), Positives = 60/144 (41%), Gaps = 20/144 (13%)
Query: 120 YSILVCDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPD 179
           ++ LV + L+ G L + I       K   E    Y   +++  +  +HDVG++H D KP+
Sbjct: 80  HTFLVMELLNGGELFERIKK----KKHFSETEASYIMRKLVSAVSHMHDVGVVHRDLKPE 135
Query: 180 NLLIRYARDELTVLDHDRSGPWQDQGLCLVDWGRGIDLHLFPDNMEFEGDCRTSGFRCIE 239
           NLL     D L +               ++D+  G      PDN   +  C T  +   E
Sbjct: 136 NLLFTDENDNLEIK--------------IIDF--GFARLKPPDNQPLKTPCFTLHYAAPE 179
Query: 240 MQEKKPWKFQVDTYGLCAIVHMML 263
           +  +  +    D + L  I++ ML
Sbjct: 180 LLNQNGYDESCDLWSLGVILYTML 203

>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6 Bound To Amppnp Length = 576

Iteration: 1
 Score = 43.5 bits (101), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 42/181 (23%), Positives = 77/181 (42%), Gaps = 26/181 (14%)
Query: 94  RQLDQRISGRERSSFGFAHRIHLYSDYSILVCDYLSQGTLQDAINSYVVIGKSMEEVLCI 153
           +Q+ ++++ R   S  +A+      D   LV   ++ G L+  I  Y +      E   +
Sbjct: 235 KQILEKVNSRFVVSLAYAYET---KDALCLVLTLMNGGDLKFHI--YHMGQAGFPEARAV 289
Query: 154 YYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSGPWQDQGLCLVDWGR 213
           +Y  E+ C LE LH   I++ D KP+N+L+                   D G   +    
Sbjct: 290 FYAAEICCGLEDLHRERIVYRDLKPENILL------------------DDHGHIRIS-DL 330
Query: 214 GIDLHLFPDNMEFEGDCRTSGFRCIEMQEKKPWKFQVDTYGL-CAIVHMMLHNSYMEIEK 272
           G+ +H+ P+    +G   T G+   E+ + + + F  D + L C +  M+   S  +  K
Sbjct: 331 GLAVHV-PEGQTIKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRK 389
Query: 273 K 273
           K
Sbjct: 390 K 390

>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6 In Complex With Sangivamycin Length = 576

Iteration: 1
 Score = 43.1 bits (100), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 42/181 (23%), Positives = 77/181 (42%), Gaps = 26/181 (14%)
Query: 94  RQLDQRISGRERSSFGFAHRIHLYSDYSILVCDYLSQGTLQDAINSYVVIGKSMEEVLCI 153
           +Q+ ++++ R   S  +A+      D   LV   ++ G L+  I  Y +      E   +
Sbjct: 235 KQILEKVNSRFVVSLAYAYET---KDALCLVLTLMNGGDLKFHI--YHMGQAGFPEARAV 289
Query: 154 YYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSGPWQDQGLCLVDWGR 213
           +Y  E+ C LE LH   I++ D KP+N+L+                   D G   +    
Sbjct: 290 FYAAEICCGLEDLHRERIVYRDLKPENILL------------------DDHGHIRIS-DL 330
Query: 214 GIDLHLFPDNMEFEGDCRTSGFRCIEMQEKKPWKFQVDTYGL-CAIVHMMLHNSYMEIEK 272
           G+ +H+ P+    +G   T G+   E+ + + + F  D + L C +  M+   S  +  K
Sbjct: 331 GLAVHV-PEGQTIKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRK 389
Query: 273 K 273
           K
Sbjct: 390 K 390

>pdb|3CEK|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase (ttk) Length = 313

Iteration: 1
 Score = 43.1 bits (100), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 36/153 (23%), Positives = 67/153 (43%), Gaps = 23/153 (15%)
Query: 41  KTIEIGGKKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFPWEFYMYRQLDQRI 100
           +++ + G+ Y I    G GG +KVF+            L  +K  +  ++    + D + 
Sbjct: 21  QSMSVKGRIYSILKQIGSGGSSKVFQV-----------LNEKKQIYAIKYVNLEEADNQT 69
Query: 101 SGRERSSFGFAHRIHLYSDYSILVCDY----------LSQGTLQDAINSYVVIGKSMEEV 150
               R+   + +++  +SD  I + DY          +  G +   +NS++   KS++  
Sbjct: 70  LDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVMECGNID--LNSWLKKKKSIDPW 127
Query: 151 LCIYYTIEMLCILESLHDVGIIHGDFKPDNLLI 183
               Y   ML  + ++H  GI+H D KP N LI
Sbjct: 128 ERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLI 160

>pdb|3H9F|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase (Ttk) In Complex With A Pyrimido-Diazepin Ligand Length = 313

Iteration: 1
 Score = 43.1 bits (100), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 36/153 (23%), Positives = 67/153 (43%), Gaps = 23/153 (15%)
Query: 41  KTIEIGGKKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFPWEFYMYRQLDQRI 100
           +++ + G+ Y I    G GG +KVF+            L  +K  +  ++    + D + 
Sbjct: 21  QSMSVKGRIYSILKQIGSGGSSKVFQV-----------LNEKKQIYAIKYVNLEEADNQT 69
Query: 101 SGRERSSFGFAHRIHLYSDYSILVCDY----------LSQGTLQDAINSYVVIGKSMEEV 150
               R+   + +++  +SD  I + DY          +  G +   +NS++   KS++  
Sbjct: 70  LDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVMECGNID--LNSWLKKKKSIDPW 127
Query: 151 LCIYYTIEMLCILESLHDVGIIHGDFKPDNLLI 183
               Y   ML  + ++H  GI+H D KP N LI
Sbjct: 128 ERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLI 160

>pdb|3VQU|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In Complex With 4- [(4-Amino-5-Cyano-6-Ethoxypyridin-2- Yl)amino]benzamide Length = 320

Iteration: 1
 Score = 43.1 bits (100), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 37/151 (24%), Positives = 65/151 (43%), Gaps = 23/151 (15%)
Query: 43  IEIGGKKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFPWEFYMYRQLDQRISG 102
           I + G+ Y I    G GG +KVF+            L  +K  +  ++    + D +   
Sbjct: 3   ISVKGRIYSILKQIGSGGSSKVFQV-----------LNEKKQIYAIKYVNLEEADNQTLD 51
Query: 103 RERSSFGFAHRIHLYSDYSILVCDY----------LSQGTLQDAINSYVVIGKSMEEVLC 152
             R+   + +++  +SD  I + DY          +  G +   +NS++   KS++    
Sbjct: 52  SYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVMECGNID--LNSWLKKKKSIDPWER 109
Query: 153 IYYTIEMLCILESLHDVGIIHGDFKPDNLLI 183
             Y   ML  + ++H  GI+H D KP N LI
Sbjct: 110 KSYWKNMLEAVHTIHQHGIVHSDLKPANFLI 140

>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein Kinase 1d Length = 334

Iteration: 1
 Score = 42.7 bits (99), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 30/103 (29%), Positives = 49/103 (47%), Gaps = 27/103 (26%)
Query: 166 LHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSGPWQDQGLCLVDWGRGIDLHLFPDNME 225
           LH +GI+H D KP+NLL  Y++DE             +  + + D+G           ME
Sbjct: 136 LHRMGIVHRDLKPENLLY-YSQDE-------------ESKIMISDFGLS--------KME 173
Query: 226 FEGD-----CRTSGFRCIEMQEKKPWKFQVDTYGLCAIVHMML 263
            +GD     C T G+   E+  +KP+   VD + +  I +++L
Sbjct: 174 GKGDVMSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILL 216

>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent Protein Kinase I 1-320 In Complex With Atp Length = 320

Iteration: 1
 Score = 42.7 bits (99), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 32/111 (28%), Positives = 52/111 (46%), Gaps = 27/111 (24%)
Query: 158 EMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSGPWQDQGLCLVDWGRGIDL 217
           ++L  ++ LHD+GI+H D KP+NLL  Y+ DE             D  + + D+G     
Sbjct: 124 QVLDAVKYLHDLGIVHRDLKPENLLY-YSLDE-------------DSKIMISDFGLS--- 166
Query: 218 HLFPDNMEFEGD-----CRTSGFRCIEMQEKKPWKFQVDTYGLCAIVHMML 263
                 ME  G      C T G+   E+  +KP+   VD + +  I +++L
Sbjct: 167 -----KMEDPGSVLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILL 212

>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat Length = 332

Iteration: 1
 Score = 42.7 bits (99), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 32/111 (28%), Positives = 52/111 (46%), Gaps = 27/111 (24%)
Query: 158 EMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSGPWQDQGLCLVDWGRGIDL 217
           ++L  ++ LHD+GI+H D KP+NLL  Y+ DE             D  + + D+G     
Sbjct: 124 QVLDAVKYLHDLGIVHRDLKPENLLY-YSLDE-------------DSKIMISDFGLS--- 166
Query: 218 HLFPDNMEFEGD-----CRTSGFRCIEMQEKKPWKFQVDTYGLCAIVHMML 263
                 ME  G      C T G+   E+  +KP+   VD + +  I +++L
Sbjct: 167 -----KMEDPGSVLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILL 212

>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent Protein Kinase I 1-315 In Complex With Atp Length = 315

Iteration: 1
 Score = 42.7 bits (99), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 32/111 (28%), Positives = 52/111 (46%), Gaps = 27/111 (24%)
Query: 158 EMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSGPWQDQGLCLVDWGRGIDL 217
           ++L  ++ LHD+GI+H D KP+NLL  Y+ DE             D  + + D+G     
Sbjct: 124 QVLDAVKYLHDLGIVHRDLKPENLLY-YSLDE-------------DSKIMISDFGLS--- 166
Query: 218 HLFPDNMEFEGD-----CRTSGFRCIEMQEKKPWKFQVDTYGLCAIVHMML 263
                 ME  G      C T G+   E+  +KP+   VD + +  I +++L
Sbjct: 167 -----KMEDPGSVLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILL 212

>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage Checkpoint Kinase Length = 419

Iteration: 1
 Score = 42.7 bits (99), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 26/65 (40%), Positives = 37/65 (56%), Gaps = 5/65 (7%)
Query: 119 DYSILVCDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKP 178
           DY I V + +  G L D     VV  K ++E  C  Y  +ML  ++ LH+ GIIH D KP
Sbjct: 213 DYYI-VLELMEGGELFDK----VVGNKRLKEATCKLYFYQMLLAVQYLHENGIIHRDLKP 267
Query: 179 DNLLI 183
           +N+L+
Sbjct: 268 ENVLL 272

>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein Kinase I G Length = 304

Iteration: 1
 Score = 42.7 bits (99), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 29/106 (27%), Positives = 50/106 (47%), Gaps = 18/106 (16%)
Query: 158 EMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSGPWQDQGLCLVDWGRGIDL 217
           ++L  ++ LH+ GI+H D KP+NLL       LT        P ++  + + D+G    L
Sbjct: 114 QVLSAVKYLHENGIVHRDLKPENLLY------LT--------PEENSKIMITDFG----L 155
Query: 218 HLFPDNMEFEGDCRTSGFRCIEMQEKKPWKFQVDTYGLCAIVHMML 263
                N      C T G+   E+  +KP+   VD + +  I +++L
Sbjct: 156 SKMEQNGIMSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVITYILL 201

>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage Checkpoint Kinase Length = 443

Iteration: 1
 Score = 42.4 bits (98), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 26/65 (40%), Positives = 37/65 (56%), Gaps = 5/65 (7%)
Query: 119 DYSILVCDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKP 178
           DY I V + +  G L D     VV  K ++E  C  Y  +ML  ++ LH+ GIIH D KP
Sbjct: 227 DYYI-VLELMEGGELFDK----VVGNKRLKEATCKLYFYQMLLAVQYLHENGIIHRDLKP 281
Query: 179 DNLLI 183
           +N+L+
Sbjct: 282 ENVLL 286

>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With Inhibitor Pv976 Length = 323

Iteration: 1
 Score = 42.4 bits (98), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 26/65 (40%), Positives = 37/65 (56%), Gaps = 5/65 (7%)
Query: 119 DYSILVCDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKP 178
           DY I V + +  G L D     VV  K ++E  C  Y  +ML  ++ LH+ GIIH D KP
Sbjct: 88  DYYI-VLELMEGGELFDK----VVGNKRLKEATCKLYFYQMLLAVQYLHENGIIHRDLKP 142
Query: 179 DNLLI 183
           +N+L+
Sbjct: 143 ENVLL 147

>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1 Length = 415

Iteration: 1
 Score = 42.4 bits (98), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 43/182 (23%), Positives = 73/182 (40%), Gaps = 36/182 (19%)
Query: 2   NKLLKQINSQIMKFEGYHRSNKVYSGKVALSSLNNSSRNKTIEIGGKKYQIKGCAGQGGF 61
            +L+K++      FE      +   G+VA+  + N+ R   ++I  K   +K  A    F
Sbjct: 63  TQLVKEMQLHREDFEIIKVIGRGAFGEVAVVKMKNTERIYAMKILNKWEMLKR-AETACF 121
Query: 62  AKVFKAYVNGDPEDVVALKIQKPAFPWEFYMYRQLDQRISGRERSSFGFAHRIHLYSDYS 121
            +     VNGD + + AL                            + F    HLY    
Sbjct: 122 REERDVLVNGDCQWITALH---------------------------YAFQDENHLY---- 150
Query: 122 ILVCDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNL 181
            LV DY   G L   ++ +      + E +  +Y  EM+  ++S+H +  +H D KPDN+
Sbjct: 151 -LVMDYYVGGDLLTLLSKF---EDKLPEDMARFYIGEMVLAIDSIHQLHYVHRDIKPDNV 206
Query: 182 LI 183
           L+
Sbjct: 207 LL 208

>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A Specific Inhibitor Length = 323

Iteration: 1
 Score = 42.4 bits (98), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 26/65 (40%), Positives = 37/65 (56%), Gaps = 5/65 (7%)
Query: 119 DYSILVCDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKP 178
           DY I V + +  G L D     VV  K ++E  C  Y  +ML  ++ LH+ GIIH D KP
Sbjct: 88  DYYI-VLELMEGGELFDK----VVGNKRLKEATCKLYFYQMLLAVQYLHENGIIHRDLKP 142
Query: 179 DNLLI 183
           +N+L+
Sbjct: 143 ENVLL 147

>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent Protein Kinase I 1-293 In Complex With Atp Length = 293

Iteration: 1
 Score = 42.4 bits (98), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 32/111 (28%), Positives = 52/111 (46%), Gaps = 27/111 (24%)
Query: 158 EMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSGPWQDQGLCLVDWGRGIDL 217
           ++L  ++ LHD+GI+H D KP+NLL  Y+ DE             D  + + D+G     
Sbjct: 124 QVLDAVKYLHDLGIVHRDLKPENLLY-YSLDE-------------DSKIMISDFGLS--- 166
Query: 218 HLFPDNMEFEGD-----CRTSGFRCIEMQEKKPWKFQVDTYGLCAIVHMML 263
                 ME  G      C T G+   E+  +KP+   VD + +  I +++L
Sbjct: 167 -----KMEDPGSVLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILL 212

>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With Inhibitor Pv1531 Length = 322

Iteration: 1
 Score = 42.4 bits (98), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 26/65 (40%), Positives = 37/65 (56%), Gaps = 5/65 (7%)
Query: 119 DYSILVCDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKP 178
           DY I V + +  G L D     VV  K ++E  C  Y  +ML  ++ LH+ GIIH D KP
Sbjct: 88  DYYI-VLELMEGGELFDK----VVGNKRLKEATCKLYFYQMLLAVQYLHENGIIHRDLKP 142
Query: 179 DNLLI 183
           +N+L+
Sbjct: 143 ENVLL 147

>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In Complex With Inhibitor Pv1533 Length = 322

Iteration: 1
 Score = 42.4 bits (98), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 26/65 (40%), Positives = 37/65 (56%), Gaps = 5/65 (7%)
Query: 119 DYSILVCDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKP 178
           DY I V + +  G L D     VV  K ++E  C  Y  +ML  ++ LH+ GIIH D KP
Sbjct: 87  DYYI-VLELMEGGELFDK----VVGNKRLKEATCKLYFYQMLLAVQYLHENGIIHRDLKP 141
Query: 179 DNLLI 183
           +N+L+
Sbjct: 142 ENVLL 146

>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp Length = 329

Iteration: 1
 Score = 42.4 bits (98), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 26/65 (40%), Positives = 37/65 (56%), Gaps = 5/65 (7%)
Query: 119 DYSILVCDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKP 178
           DY I V + +  G L D     VV  K ++E  C  Y  +ML  ++ LH+ GIIH D KP
Sbjct: 94  DYYI-VLELMEGGELFDK----VVGNKRLKEATCKLYFYQMLLAVQYLHENGIIHRDLKP 148
Query: 179 DNLLI 183
           +N+L+
Sbjct: 149 ENVLL 153

>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex With Flavonoid Glycoside Sl0101 Length = 304

Iteration: 1
 Score = 42.0 bits (97), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 39/145 (26%), Positives = 67/145 (46%), Gaps = 20/145 (13%)
Query: 49  KYQIKGCAGQGGFAKVF--KAYVNGDPEDVVALKIQKPAFPWEFYMYRQLDQRISGRERS 106
           ++++    GQG F KVF  K     D   + A+K+ K A        +  D+  +  ER 
Sbjct: 25  QFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKA------TLKVRDRVRTKMERD 78
Query: 107 -----SFGFAHRIHLYSDYS---ILVCDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIE 158
                +  F  ++H          L+ D+L  G L   ++  V+   + E+V   +Y  E
Sbjct: 79  ILVEVNHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMF--TEEDV--KFYLAE 134
Query: 159 MLCILESLHDVGIIHGDFKPDNLLI 183
           +   L+ LH +GII+ D KP+N+L+
Sbjct: 135 LALALDHLHSLGIIYRDLKPENILL 159

>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N- Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2 Length = 325

Iteration: 1
 Score = 42.0 bits (97), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 39/145 (26%), Positives = 67/145 (46%), Gaps = 20/145 (13%)
Query: 49  KYQIKGCAGQGGFAKVF--KAYVNGDPEDVVALKIQKPAFPWEFYMYRQLDQRISGRERS 106
           ++++    GQG F KVF  K     D   + A+K+ K A        +  D+  +  ER 
Sbjct: 25  QFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKA------TLKVRDRVRTKMERD 78
Query: 107 -----SFGFAHRIHLYSDYS---ILVCDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIE 158
                +  F  ++H          L+ D+L  G L   ++  V+   + E+V   +Y  E
Sbjct: 79  ILVEVNHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMF--TEEDV--KFYLAE 134
Query: 159 MLCILESLHDVGIIHGDFKPDNLLI 183
           +   L+ LH +GII+ D KP+N+L+
Sbjct: 135 LALALDHLHSLGIIYRDLKPENILL 159

>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil Length = 433

Iteration: 1
 Score = 42.0 bits (97), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 43/183 (23%), Positives = 73/183 (39%), Gaps = 36/183 (19%)
Query: 1   MNKLLKQINSQIMKFEGYHRSNKVYSGKVALSSLNNSSRNKTIEIGGKKYQIKGCAGQGG 60
             +L+K++      FE      +   G+VA+  + N+ R   ++I  K   +K  A    
Sbjct: 78  FTQLVKEMQLHREDFEIIKVIGRGAFGEVAVVKMKNTERIYAMKILNKWEMLKR-AETAC 136
Query: 61  FAKVFKAYVNGDPEDVVALKIQKPAFPWEFYMYRQLDQRISGRERSSFGFAHRIHLYSDY 120
           F +     VNGD + + AL                            + F    HLY   
Sbjct: 137 FREERDVLVNGDCQWITALH---------------------------YAFQDENHLY--- 166
Query: 121 SILVCDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDN 180
             LV DY   G L   ++ +      + E +  +Y  EM+  ++S+H +  +H D KPDN
Sbjct: 167 --LVMDYYVGGDLLTLLSKF---EDKLPEDMARFYIGEMVLAIDSIHQLHYVHRDIKPDN 221
Query: 181 LLI 183
           +L+
Sbjct: 222 VLL 224

>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin Length = 305

Iteration: 1
 Score = 42.0 bits (97), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 39/145 (26%), Positives = 67/145 (46%), Gaps = 20/145 (13%)
Query: 49  KYQIKGCAGQGGFAKVF--KAYVNGDPEDVVALKIQKPAFPWEFYMYRQLDQRISGRERS 106
           ++++    GQG F KVF  K     D   + A+K+ K A        +  D+  +  ER 
Sbjct: 26  QFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKA------TLKVRDRVRTKMERD 79
Query: 107 -----SFGFAHRIHLYSDYS---ILVCDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIE 158
                +  F  ++H          L+ D+L  G L   ++  V+   + E+V   +Y  E
Sbjct: 80  ILVEVNHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMF--TEEDV--KFYLAE 135
Query: 159 MLCILESLHDVGIIHGDFKPDNLLI 183
           +   L+ LH +GII+ D KP+N+L+
Sbjct: 136 LALALDHLHSLGIIYRDLKPENILL 160

>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric Activator Ps171 Bound To The Pif-Pocket Length = 311

Iteration: 1
 Score = 42.0 bits (97), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 18/38 (47%), Positives = 25/38 (65%)
Query: 146 SMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLI 183
           S +E    +YT E++  LE LH  GIIH D KP+N+L+
Sbjct: 128 SFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILL 165

>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine Length = 353

Iteration: 1
 Score = 41.6 bits (96), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 54/239 (22%), Positives = 92/239 (38%), Gaps = 40/239 (16%)
Query: 35  NNSSRNKTIEIGGKKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFPWEFYMYR 94
           N    N +  +G   ++     G+G F KV  A V  +  D+ A+K+ K        + +
Sbjct: 10  NGIGVNSSNRLGIDNFEFIRVLGKGSFGKVMLARVK-ETGDLYAVKVLKKD-----VILQ 63
Query: 95  QLDQRISGRERSSFGFAHRIHLY----------SDYSILVCDYLSQGTLQDAINSYVVIG 144
             D   +  E+     A R H +           D    V ++++ G L   I       
Sbjct: 64  DDDVECTMTEKRILSLA-RNHPFLTQLFCCFQTPDRLFFVMEFVNGGDLMFHIQK----S 118
Query: 145 KSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSGPWQDQ 204
           +  +E    +Y  E++  L  LHD GII+ D K DN+L          LDH+      D 
Sbjct: 119 RRFDEARARFYAAEIISALMFLHDKGIIYRDLKLDNVL----------LDHEGHCKLADF 168
Query: 205 GLCLVDWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQEKKPWKFQVDTYGLCAIVHMML 263
           G+C      G+    F         C T  +   E+ ++  +   VD + +  +++ ML
Sbjct: 169 GMCKEGICNGVTTATF---------CGTPDYIAPEILQEMLYGPAVDWWAMGVLLYEML 218

>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human Pdk1 Complex 2 Length = 311

Iteration: 1
 Score = 41.6 bits (96), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 18/38 (47%), Positives = 25/38 (65%)
Query: 146 SMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLI 183
           S +E    +YT E++  LE LH  GIIH D KP+N+L+
Sbjct: 128 SFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILL 165

>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With Bim-3 Length = 286

Iteration: 1
 Score = 41.6 bits (96), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 18/38 (47%), Positives = 25/38 (65%)
Query: 146 SMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLI 183
           S +E    +YT E++  LE LH  GIIH D KP+N+L+
Sbjct: 105 SFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILL 142

>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1 Catalytic Domain Length = 289

Iteration: 1
 Score = 41.6 bits (96), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 18/38 (47%), Positives = 25/38 (65%)
Query: 146 SMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLI 183
           S +E    +YT E++  LE LH  GIIH D KP+N+L+
Sbjct: 106 SFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILL 143

>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx Length = 314

Iteration: 1
 Score = 41.6 bits (96), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 18/38 (47%), Positives = 25/38 (65%)
Query: 146 SMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLI 183
           S +E    +YT E++  LE LH  GIIH D KP+N+L+
Sbjct: 131 SFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILL 168

>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i Length = 312

Iteration: 1
 Score = 41.6 bits (96), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 18/38 (47%), Positives = 25/38 (65%)
Query: 146 SMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLI 183
           S +E    +YT E++  LE LH  GIIH D KP+N+L+
Sbjct: 129 SFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILL 166

>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A Pyrazoloquinazoline Inhibitor Length = 309

Iteration: 1
 Score = 41.6 bits (96), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 18/38 (47%), Positives = 25/38 (65%)
Query: 146 SMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLI 183
           S +E    +YT E++  LE LH  GIIH D KP+N+L+
Sbjct: 126 SFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILL 163

>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent Kinase- 1 (Pdk-1)catalytic Domain Bound To A Dibenzonaphthyridine Inhibitor Length = 312

Iteration: 1
 Score = 41.6 bits (96), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 18/38 (47%), Positives = 25/38 (65%)
Query: 146 SMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLI 183
           S +E    +YT E++  LE LH  GIIH D KP+N+L+
Sbjct: 129 SFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILL 166

>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain Length = 310

Iteration: 1
 Score = 41.6 bits (96), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 18/38 (47%), Positives = 25/38 (65%)
Query: 146 SMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLI 183
           S +E    +YT E++  LE LH  GIIH D KP+N+L+
Sbjct: 126 SFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILL 163

>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through Fragment-Based Lead Discovery Length = 311

Iteration: 1
 Score = 41.6 bits (96), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 18/38 (47%), Positives = 25/38 (65%)
Query: 146 SMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLI 183
           S +E    +YT E++  LE LH  GIIH D KP+N+L+
Sbjct: 128 SFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILL 165

>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8 Length = 286

Iteration: 1
 Score = 41.6 bits (96), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 18/38 (47%), Positives = 25/38 (65%)
Query: 146 SMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLI 183
           S +E    +YT E++  LE LH  GIIH D KP+N+L+
Sbjct: 104 SFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILL 141

>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain In Complex With Atp Length = 311

Iteration: 1
 Score = 41.6 bits (96), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 18/38 (47%), Positives = 25/38 (65%)
Query: 146 SMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLI 183
           S +E    +YT E++  LE LH  GIIH D KP+N+L+
Sbjct: 128 SFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILL 165

>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In Complex With Compound 9 Length = 311

Iteration: 1
 Score = 41.6 bits (96), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 18/38 (47%), Positives = 25/38 (65%)
Query: 146 SMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLI 183
           S +E    +YT E++  LE LH  GIIH D KP+N+L+
Sbjct: 128 SFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILL 165

>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With Ly333531 Length = 310

Iteration: 1
 Score = 41.6 bits (96), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 18/38 (47%), Positives = 25/38 (65%)
Query: 146 SMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLI 183
           S +E    +YT E++  LE LH  GIIH D KP+N+L+
Sbjct: 126 SFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILL 163

>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3- Phosphoinositide Dependent Kinase (Pdk1) Length = 311

Iteration: 1
 Score = 41.6 bits (96), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 18/38 (47%), Positives = 25/38 (65%)
Query: 146 SMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLI 183
           S +E    +YT E++  LE LH  GIIH D KP+N+L+
Sbjct: 128 SFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILL 165

>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A Pyrazoloquinazoline Inhibitor Length = 309

Iteration: 1
 Score = 41.6 bits (96), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 18/38 (47%), Positives = 25/38 (65%)
Query: 146 SMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLI 183
           S +E    +YT E++  LE LH  GIIH D KP+N+L+
Sbjct: 126 SFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILL 163

>pdb|1Z5M|A Chain A, Crystal Structure Of N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl) Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2- Dimethylpropanediamide Complexed With Human Pdk1 Length = 286

Iteration: 1
 Score = 41.6 bits (96), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 18/38 (47%), Positives = 25/38 (65%)
Query: 146 SMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLI 183
           S +E    +YT E++  LE LH  GIIH D KP+N+L+
Sbjct: 103 SFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILL 140

>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment Inhibitor 1f8 Length = 316

Iteration: 1
 Score = 41.6 bits (96), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 18/38 (47%), Positives = 25/38 (65%)
Query: 146 SMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLI 183
           S +E    +YT E++  LE LH  GIIH D KP+N+L+
Sbjct: 133 SFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILL 170

>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1 Bound To Atp And Magnesium Chloride At 2.9a Length = 543

Iteration: 1
 Score = 41.6 bits (96), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 32/117 (27%), Positives = 51/117 (43%), Gaps = 19/117 (16%)
Query: 147 MEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSGPWQDQGL 206
            +E   I+YT +++  LE LH   II+ D KP+N+L          LD D +    D GL
Sbjct: 286 FQEPRAIFYTAQIVSGLEHLHQRNIIYRDLKPENVL----------LDDDGNVRISDLGL 335
Query: 207 CLVDWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQEKKPWKFQVDTYGLCAIVHMML 263
                     + L     + +G   T GF   E+   + + F VD + L   ++ M+
Sbjct: 336 A---------VELKAGQTKTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMI 383

>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7 Length = 311

Iteration: 1
 Score = 41.6 bits (96), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 18/38 (47%), Positives = 25/38 (65%)
Query: 146 SMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLI 183
           S +E    +YT E++  LE LH  GIIH D KP+N+L+
Sbjct: 125 SFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILL 162

>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1 Bound To Atp And Magnesium Chloride At 2.7a Length = 543

Iteration: 1
 Score = 41.6 bits (96), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 32/117 (27%), Positives = 51/117 (43%), Gaps = 19/117 (16%)
Query: 147 MEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSGPWQDQGL 206
            +E   I+YT +++  LE LH   II+ D KP+N+L          LD D +    D GL
Sbjct: 286 FQEPRAIFYTAQIVSGLEHLHQRNIIYRDLKPENVL----------LDDDGNVRISDLGL 335
Query: 207 CLVDWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQEKKPWKFQVDTYGLCAIVHMML 263
                     + L     + +G   T GF   E+   + + F VD + L   ++ M+
Sbjct: 336 A---------VELKAGQTKTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMI 383

>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution Length = 543

Iteration: 1
 Score = 41.6 bits (96), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 32/117 (27%), Positives = 51/117 (43%), Gaps = 19/117 (16%)
Query: 147 MEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSGPWQDQGL 206
            +E   I+YT +++  LE LH   II+ D KP+N+L          LD D +    D GL
Sbjct: 286 FQEPRAIFYTAQIVSGLEHLHQRNIIYRDLKPENVL----------LDDDGNVRISDLGL 335
Query: 207 CLVDWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQEKKPWKFQVDTYGLCAIVHMML 263
                     + L     + +G   T GF   E+   + + F VD + L   ++ M+
Sbjct: 336 A---------VELKAGQTKTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMI 383

>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6 Length = 311

Iteration: 1
 Score = 41.6 bits (96), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 18/38 (47%), Positives = 25/38 (65%)
Query: 146 SMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLI 183
           S +E    +YT E++  LE LH  GIIH D KP+N+L+
Sbjct: 125 SFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILL 162

>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead Compound Length = 292

Iteration: 1
 Score = 41.2 bits (95), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 18/38 (47%), Positives = 25/38 (65%)
Query: 146 SMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLI 183
           S +E    +YT E++  LE LH  GIIH D KP+N+L+
Sbjct: 110 SFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILL 147

>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I) Length = 327

Iteration: 1
 Score = 41.2 bits (95), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 56/229 (24%), Positives = 88/229 (38%), Gaps = 47/229 (20%)
Query: 50  YQIKGCAGQGGFAKVF--KAYVNGDPEDVVALKIQKPAFPWEFYMYRQLDQRISGRERSS 107
           +++    G+GG+ KVF  +     +   + A+K+ K A      +    D   +  ER+ 
Sbjct: 19  FELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAM----IVRNAKDTAHTKAERNI 74
Query: 108 -------------FGFAHRIHLYSDYSILVCDYLSQGTLQDAINSYVVIGKSMEEVLCIY 154
                        + F     LY     L+ +YLS G L   +      G  ME+  C +
Sbjct: 75  LEEVKHPFIVDLIYAFQTGGKLY-----LILEYLSGGELFMQLERE---GIFMEDTAC-F 125
Query: 155 YTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSGPWQDQGLCLVDWGRG 214
           Y  E+   L  LH  GII+ D KP+N++          L+H       D GLC      G
Sbjct: 126 YLAEISMALGHLHQKGIIYRDLKPENIM----------LNHQGHVKLTDFGLCKESIHDG 175
Query: 215 IDLHLFPDNMEFEGDCRTSGFRCIEMQEKKPWKFQVDTYGLCAIVHMML 263
              H F         C T  +   E+  +      VD + L A+++ ML
Sbjct: 176 TVTHTF---------CGTIEYMAPEILMRSGHNRAVDWWSLGALMYDML 215

>pdb|4F99|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide Length = 361

Iteration: 1
 Score = 41.2 bits (95), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 36/136 (26%), Positives = 63/136 (46%), Gaps = 12/136 (8%)
Query: 50  YQIKGCAGQGGFAKVF--KAYVNGDPEDVVALKIQKP-AFPWEFYMYRQLDQRISGRERS 106
           ++I+   G+G F+ V+   A +   PE+ +ALK   P + P       Q    ++G + +
Sbjct: 23  FKIEDKIGEGTFSSVYLATAQLQVGPEEKIALKHLIPTSHPIRIAAELQC-LTVAGGQDN 81
Query: 107 SFGFAHRIHLYSDYSILVCDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESL 166
             G  +     +D+ ++   YL   +  D +NS      S +EV    Y + +   L+ +
Sbjct: 82  VMGVKYCFR-KNDHVVIAMPYLEHESFLDILNSL-----SFQEVR--EYMLNLFKALKRI 133
Query: 167 HDVGIIHGDFKPDNLL 182
           H  GI+H D KP N L
Sbjct: 134 HQFGIVHRDVKPSNFL 149

>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1 Length = 327

Iteration: 1
 Score = 41.2 bits (95), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 56/229 (24%), Positives = 88/229 (38%), Gaps = 47/229 (20%)
Query: 50  YQIKGCAGQGGFAKVF--KAYVNGDPEDVVALKIQKPAFPWEFYMYRQLDQRISGRERSS 107
           +++    G+GG+ KVF  +     +   + A+K+ K A      +    D   +  ER+ 
Sbjct: 19  FELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAM----IVRNAKDTAHTKAERNI 74
Query: 108 -------------FGFAHRIHLYSDYSILVCDYLSQGTLQDAINSYVVIGKSMEEVLCIY 154
                        + F     LY     L+ +YLS G L   +      G  ME+  C +
Sbjct: 75  LEEVKHPFIVDLIYAFQTGGKLY-----LILEYLSGGELFMQLERE---GIFMEDTAC-F 125
Query: 155 YTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSGPWQDQGLCLVDWGRG 214
           Y  E+   L  LH  GII+ D KP+N++          L+H       D GLC      G
Sbjct: 126 YLAEISMALGHLHQKGIIYRDLKPENIM----------LNHQGHVKLTDFGLCKESIHDG 175
Query: 215 IDLHLFPDNMEFEGDCRTSGFRCIEMQEKKPWKFQVDTYGLCAIVHMML 263
              H F         C T  +   E+  +      VD + L A+++ ML
Sbjct: 176 TVTHXF---------CGTIEYMAPEILMRSGHNRAVDWWSLGALMYDML 215

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	351
3e7e_A	365	HBUB1, BUB1A, mitotic checkpoint serine/threonine-	2e-93
3cek_A	313	Dual specificity protein kinase TTK; HMPS1, PYT, E	1e-14
3dbq_A	343	Dual specificity protein kinase TTK; MPS1 structur	2e-14
2zmd_A	390	Dual specificity protein kinase TTK; MPS1, T686A,	3e-14
2pzi_A	681	Probable serine/threonine-protein kinase PKNG; ATP	2e-13
2buj_A	317	Serine/threonine-protein kinase 16; transferase, A	5e-13
3dzo_A	413	Rhoptry kinase domain; parasitic disease, transfer	2e-12
2v62_A	345	Serine/threonine-protein kinase VRK2; transferase,	2e-12
2izr_A	330	Casein kinase I isoform gamma-3; serine/threonine-	3e-12
3sv0_A	483	Casein kinase I-like; typical kinase domain fold,	3e-12
1csn_A	298	Casein kinase-1; phosphotransferase; HET: ATP; 2.0	4e-12
3uzp_A	296	CKI-delta, CKID, casein kinase I isoform delta; CK	4e-12
3byv_A	377	Rhoptry kinase; malaria, transferase, structural g	5e-12
3op5_A	364	Serine/threonine-protein kinase VRK1; adenosine tr	2e-11
2jii_A	352	Serine/threonine-protein kinase VRK3 molecule: VA	2e-11
3q60_A	371	ROP5B; pseudokinase, transferase; HET: ATP; 1.72A	3e-11
3ll6_A	337	Cyclin G-associated kinase; transferase, protein k	7e-11
1x8b_A	289	WEE1HU, WEE1-like protein kinase; cell cycle, tran	5e-10
4g3f_A	336	NF-kappa-beta-inducing kinase; non-RD kinase, prot	1e-09
3p1a_A	311	MYT1 kinase, membrane-associated tyrosine- and thr	2e-09
1j1b_A	420	Glycogen synthase kinase-3 beta; complex, TAU, AMP	2e-09
4e7w_A	394	Glycogen synthase kinase 3; GSK3, PTyr195, transfe	4e-09
3uqc_A	286	Probable conserved transmembrane protein; structur	4e-09
1zy4_A	303	Serine/threonine-protein kinase GCN2; translation	5e-09
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	5e-09
2owb_A	335	Serine/threonine-protein kinase PLK1; catalytic do	9e-09
2rku_A	294	Serine/threonine-protein kinase PLK1; structure of	1e-08
4g31_A	299	Eukaryotic translation initiation factor 2-alpha;	1e-08
3cok_A	278	Serine/threonine-protein kinase PLK4; POLO-like ki	1e-08
4eut_A	396	Serine/threonine-protein kinase TBK1; ATP binding,	2e-08
4euu_A	319	Serine/threonine-protein kinase TBK1; ATP binding,	3e-08
1wak_A	397	Serine/threonine-protein kinase SPRK1; SRPK, trans	4e-08
2eu9_A	355	Dual specificity protein kinase CLK3; kinase domai	5e-08
2vd5_A	412	DMPK protein; serine/threonine-protein kinase, kin	5e-08
3kvw_A	429	DYRK2, dual specificity tyrosine-phosphorylation-r	5e-08
2zv2_A	298	Calcium/calmodulin-dependent protein kinase kinas;	7e-08
2wqm_A	310	Serine/threonine-protein kinase NEK7; ATP-binding,	1e-07
2vwi_A	303	Serine/threonine-protein kinase OSR1; STE kinase,	1e-07
3eb0_A	383	Putative uncharacterized protein; kinase cryptospo	1e-07
1z57_A	339	Dual specificity protein kinase CLK1; protein tyro	1e-07
2a19_B	284	Interferon-induced, double-stranded RNA-activated	1e-07
2x7f_A	326	TRAF2 and NCK-interacting protein kinase; serine/t	3e-07
3fdn_A	279	Serine/threonine-protein kinase 6; aurora kinase i	3e-07
2pml_X	348	PFPK7, Ser/Thr protein kinase; phosphorylati trans	3e-07
2vgo_A	284	Serine/threonine-protein kinase 12-A; nucleotide-b	4e-07
3a7i_A	303	MST3 kinase, serine/threonine kinase 24 (STE20 hom	4e-07
3a99_A	320	Proto-oncogene serine/threonine-protein kinase PI;	4e-07
4apc_A	350	Serine/threonine-protein kinase NEK1; transferase;	4e-07
2iwi_A	312	Serine/threonine-protein kinase PIM-2; nucleotide-	4e-07
2ycf_A	322	Serine/threonine-protein kinase CHK2; transferase,	4e-07
3gni_B	389	Strad alpha; kinase fold, pseudokinase, alpha heli	5e-07
1q8y_A	373	SR protein kinase; transferase; HET: ADP ADE; 2.05	5e-07
3llt_A	360	Serine/threonine kinase-1, pflammer; lammer kinase	6e-07
3p23_A	432	Serine/threonine-protein kinase/endoribonuclease;	6e-07
2j7t_A	302	Serine/threonine-protein kinase 10; transferase, A	7e-07
3i6u_A	419	CDS1, serine/threonine-protein kinase CHK2; Ser/Th	7e-07
4aw2_A	437	Serine/threonine-protein kinase MRCK alpha; transf	7e-07
3com_A	314	Serine/threonine-protein kinase 4; MST1, STE20-lik	1e-06
3qa8_A	676	MGC80376 protein; kinase ubiquitin-like domain, ph	1e-06
3v8s_A	410	RHO-associated protein kinase 1; dimerization, myo	1e-06
2clq_A	295	Mitogen-activated protein kinase kinase kinase 5;	1e-06
3is5_A	285	Calcium-dependent protein kinase; CDPK, structural	2e-06
3e3p_A	360	Protein kinase, putative glycogen synthase kinase;	2e-06
3soc_A	322	Activin receptor type-2A; structural genomics cons	2e-06
1t4h_A	290	Serine/threonine-protein kinase WNK1; protein seri	3e-06
3nsz_A	330	CK II alpha, casein kinase II subunit alpha; inhib	3e-06
2vx3_A	382	Dual specificity tyrosine-phosphorylation- regula	3e-06
3qd2_B	332	Eukaryotic translation initiation factor 2-alpha;	4e-06
3fxz_A	297	Serine/threonine-protein kinase PAK 1; transferase	4e-06
3mdy_A	337	Bone morphogenetic protein receptor type-1B; compl	4e-06
4eqm_A	294	Protein kinase; transferase; HET: ANP; 3.00A {Stap	5e-06
1uu3_A	310	HPDK1, 3-phosphoinositide dependent protein kinase	6e-06
2w5a_A	279	Serine/threonine-protein kinase NEK2; Ser/Thr prot	6e-06
2rio_A	434	Serine/threonine-protein kinase/endoribonuclease I	8e-06
1u5q_A	348	Serine/threonine protein kinase TAO2; transferase;	1e-05
3c4z_A	543	Rhodopsin kinase; Ser/Thr kinase, RGS homology dom	1e-05
2eva_A	307	TAK1 kinase - TAB1 chimera fusion protein; transfe	1e-05
2h6d_A	276	5'-AMP-activated protein kinase catalytic subunit	2e-05
3dls_A	335	PAS domain-containing serine/threonine-protein KI;	2e-05
3a62_A	327	Ribosomal protein S6 kinase beta-1; kinase domain,	2e-05
2c30_A	321	Serine/threonine-protein kinase PAK 6; CRIB domain	2e-05
1b6c_B	342	TGF-B superfamily receptor type I; complex (isomer	2e-05
2h34_A	309	Serine/threonine-protein kinase PKNE; apoenzyme, t	3e-05
3ork_A	311	Serine/threonine protein kinase; structural genomi	3e-05
3gxj_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	4e-05
1rdq_E	350	PKA C-alpha, CAMP-dependent protein kinase, alpha-	5e-05
2acx_A	576	G protein-coupled receptor kinase 6; GRK, G transf	5e-05
3q4u_A	301	Activin receptor type-1; structural genomics conso	6e-05
3fe3_A	328	MAP/microtubule affinity-regulating kinase 3; seri	7e-05
1zth_A	258	RIO1 serine protein kinase; ribosome biogenesis, r	8e-05
3c0i_A	351	Peripheral plasma membrane protein CASK; neurexin,	9e-05
3s95_A	310	LIMK-1, LIM domain kinase 1; structural genomics,	9e-05
4fr4_A	384	YANK1, serine/threonine-protein kinase 32A; struct	1e-04
2i0e_A	353	Protein kinase C-beta II; serine/threonine protein	1e-04
3g51_A	325	Ribosomal protein S6 kinase alpha-3; N-terminal ki	1e-04
2y4i_B	319	KSR2, HKSR2, kinase suppressor of RAS 2; transfera	1e-04
1nd4_A	264	Aminoglycoside 3'-phosphotransferase; protein kina	1e-04
1vzo_A	355	Ribosomal protein S6 kinase alpha 5; protein kinas	1e-04
1fot_A	318	TPK1 delta, CAMP-dependent protein kinase type 1;	1e-04
3g2f_A	336	Bone morphogenetic protein receptor type-2; kinase	1e-04
3mwu_A	486	Calmodulin-domain protein kinase 1; serine/threoni	1e-04
1phk_A	298	Phosphorylase kinase; glycogen metabolism, transfe	1e-04
3pvu_A	695	Beta-adrenergic receptor kinase 1; transferase, se	1e-04
3nyv_A	484	Calmodulin-domain protein kinase 1; serine/threoni	2e-04
3lij_A	494	Calcium/calmodulin dependent protein kinase with A	2e-04
2y94_A	476	5'-AMP-activated protein kinase catalytic subunit;	2e-04
3uto_A	573	Twitchin; kinase, muscle sarcomere, transferase; H	2e-04
2wei_A	287	Calmodulin-domain protein kinase 1, putative; nucl	2e-04
2r5t_A	373	Serine/threonine-protein kinase SGK1; AGC protein	2e-04
3mi9_A	351	Cell division protein kinase 9; P-TEFB, HIV-1, pro	3e-04
1o6l_A	337	RAC-beta serine/threonine protein kinase; protein	3e-04
2a2a_A	321	Death-associated protein kinase 2; autoinhibition,	3e-04
3lb7_A	307	RAF proto-oncogene serine/threonine-protein kinas;	3e-04
4agu_A	311	Cyclin-dependent kinase-like 1; transferase, phosp	3e-04
3a8x_A	345	Protein kinase C IOTA type; transferase; HET: TPO;	3e-04
1xjd_A	345	Protein kinase C, theta type; PKC-theta, ATP, AMP,	4e-04
4dc2_A	396	Protein kinase C IOTA type; kinase, substrate, cel	4e-04
3txo_A	353	PKC-L, NPKC-ETA, protein kinase C ETA type; phosph	4e-04
3pfq_A	674	PKC-B, PKC-beta, protein kinase C beta type; phosp	4e-04
3ttj_A	464	Mitogen-activated protein kinase 10; JNK3, protein	4e-04
2yab_A	361	Death-associated protein kinase 2; apoptosis, tran	5e-04
1kob_A	387	Twitchin; kinase, intrasteric regulation; 2.30A {A	5e-04
3sg8_A	304	APH(2'')-ID; antibiotic resistance enzyme, transfe	6e-04
3lm5_A	327	Serine/threonine-protein kinase 17B; STK17B, serin	6e-04
3q5i_A	504	Protein kinase; CDPK, malaria, phosphotransferase,	6e-04
3bhy_A	283	Death-associated protein kinase 3; death associate	6e-04
2y0a_A	326	Death-associated protein kinase 1; transferase, ca	6e-04
1blx_A	326	Cyclin-dependent kinase 6; inhibitor protein, cycl	7e-04
4aaa_A	331	Cyclin-dependent kinase-like 2; transferase, phosp	8e-04
3dtc_A	271	Mitogen-activated protein kinase kinase kinase 9;	8e-04
2xrw_A	371	Mitogen-activated protein kinase 8; transcription,	9e-04

>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens} Length = 365

 Score =  282 bits (722), Expect = 2e-93
 Identities = 105/357 (29%), Positives = 166/357 (46%), Gaps = 30/357 (8%)

Query: 1   MNKLLKQINSQIMKFEGYHRSNKVYSGKVALSSLNNSSRNKTIEIGGKKYQIKGCAGQGG 60
           + KLL  ++  +  +                  L         ++G K   +    G+G 
Sbjct: 27  IFKLLSGLSKPVSSYPNTFEWQC---------KLPAIKPKTEFQLGSKLVYVHHLLGEGA 77

Query: 61  FAKVFKAYVNGDPE----DVVALKIQKPAFPWEFYMYRQLDQRISGRERSSFGFAHRIHL 116
           FA+V++A      +        LK+QKPA PWEFY+  QL +R+    +  F   +  HL
Sbjct: 78  FAQVYEATQGDLNDAKNKQKFVLKVQKPANPWEFYIGTQLMERLKPSMQHMFMKFYSAHL 137

Query: 117 YSDYSILVCDYLSQGTLQDAINSY-VVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGD 175
           + + S+LV +  S GTL +AIN Y     K M + L I + + ML ++E +HD  IIHGD
Sbjct: 138 FQNGSVLVGELYSYGTLLNAINLYKNTPEKVMPQGLVISFAMRMLYMIEQVHDCEIIHGD 197

Query: 176 FKPDNLLIRYARDELTVLDHDRSGPWQDQGLCLVDWGRGIDLHLFPDNMEFEGDCRTSGF 235
            KPDN ++     E               GL L+D G+ ID+ LFP    F   C TSGF
Sbjct: 198 IKPDNFILGNGFLE------QDDEDDLSAGLALIDLGQSIDMKLFPKGTIFTAKCETSGF 251

Query: 236 RCIEMQEKKPWKFQVDTYGLCAIVHMMLHNSYMEIEKKASPDGGLVYLPKLSFKRYWKVE 295
           +C+EM   KPW +Q+D +G+ A V+ ML  +YM+++ +     G    P+  F+R   ++
Sbjct: 252 QCVEMLSNKPWNYQIDYFGVAATVYCMLFGTYMKVKNE-----GGECKPEGLFRRLPHLD 306

Query: 296 LWKSLFTNLLNMSSGNDKEVLQNLQKSFQDYLCSNPQ-----LLKNLKELLAKQRAS 347
           +W   F  +LN+   +    L  L++  +     +       L   L  LL + + S
Sbjct: 307 MWNEFFHVMLNIPDCHHLPSLDLLRQKLKKVFQQHYTNKIRALRNRLIVLLLECKRS 363

>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A* Length = 313

 Score = 72.7 bits (179), Expect = 1e-14
 Identities = 36/172 (20%), Positives = 61/172 (35%), Gaps = 20/172 (11%)

Query: 19  HRSNKVYSGKVALSSLNNSSRNKTIEIGGKKYQIKGCAGQGGFAKVFKAY-VNGDPEDVV 77
           H  +   SG   +     +   +++ + G+ Y I    G GG +KVF+          + 
Sbjct: 2   HHHHHHSSG---VDLGTENLYFQSMSVKGRIYSILKQIGSGGSSKVFQVLNEKKQ---IY 55

Query: 78  ALK-IQKPAFPWEFYMYRQLDQRISGRERSSFGFAHRIHLY-----SDYSILVCDYLSQG 131
           A+K +       +          I+   +        I LY       Y  +V +     
Sbjct: 56  AIKYVNLEEADNQ--TLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVMEC-GNI 112

Query: 132 TLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLI 183
            L   +       KS++      Y   ML  + ++H  GI+H D KP N LI
Sbjct: 113 DLNSWLKKK----KSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLI 160

>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens} Length = 343

 Score = 72.4 bits (178), Expect = 2e-14
 Identities = 35/151 (23%), Positives = 55/151 (36%), Gaps = 17/151 (11%)

Query: 40  NKTIEIGGKKYQIKGCAGQGGFAKVFKAY-VNGDPEDVVALK-IQKPAFPWEFYMYRQLD 97
           N+ I + G+ Y I    G GG +KVF+          + A+K +       +        
Sbjct: 1   NECISVKGRIYSILKQIGSGGSSKVFQVLNEKKQ---IYAIKYVNLEEADNQ--TLDSYR 55

Query: 98  QRISGRERSSFGFAHRIHLY-----SDYSILVCDYLSQGTLQDAINSYVVIGKSMEEVLC 152
             I+   +        I LY       Y  +V +      L   +       KS++    
Sbjct: 56  NEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVMEC-GNIDLNSWLKKK----KSIDPWER 110

Query: 153 IYYTIEMLCILESLHDVGIIHGDFKPDNLLI 183
             Y   ML  + ++H  GI+H D KP N LI
Sbjct: 111 KSYWKNMLEAVHTIHQHGIVHSDLKPANFLI 141

>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A* Length = 390

 Score = 72.2 bits (177), Expect = 3e-14
 Identities = 37/159 (23%), Positives = 58/159 (36%), Gaps = 17/159 (10%)

Query: 32  SSLNNSSRNKTIEIGGKKYQIKGCAGQGGFAKVFKAY-VNGDPEDVVALK-IQKPAFPWE 89
               +SS N+ I + G+ Y I    G GG +KVF+          + A+K +       +
Sbjct: 40  DDKASSSANECISVKGRIYSILKQIGSGGSSKVFQVLNEKKQ---IYAIKYVNLEEADNQ 96

Query: 90  FYMYRQLDQRISGRERSSFGFAHRIHLY-----SDYSILVCDYLSQGTLQDAINSYVVIG 144
                     I+   +        I LY       Y  +V +      L   +       
Sbjct: 97  --TLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVMEC-GNIDLNSWLKKK---- 149

Query: 145 KSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLI 183
           KS++      Y   ML  + ++H  GI+H D KP N LI
Sbjct: 150 KSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLI 188

>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis} Length = 681

 Score = 70.3 bits (172), Expect = 2e-13
 Identities = 38/170 (22%), Positives = 71/170 (41%), Gaps = 43/170 (25%)

Query: 45  IGGKKYQIKGCAGQGGFAKVFKAY---VNGDPEDVVALKIQKPAFPWEFYMYRQLDQRIS 101
           + G+ Y++KGC   GG   ++ A    VNG P   V LK    +   E        Q ++
Sbjct: 78  VAGQ-YEVKGCIAHGGLGWIYLALDRNVNGRP---VVLKGLVHSGDAEA-------QAMA 126

Query: 102 GRE-RSSFGFAH----RIHLYSDYSILVCDYLSQGTLQDAINSYVVI----GKSMEEVL- 151
             E +      H    +I           +++           Y+V+    G+S++    
Sbjct: 127 MAERQFLAEVVHPSIVQIF----------NFVEHTDRHGDPVGYIVMEYVGGQSLKRSKG 176

Query: 152 -------CIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLD 194
                   I Y +E+L  L  LH +G+++ D KP+N+++    ++L ++D
Sbjct: 177 QKLPVAEAIAYLLEILPALSYLHSIGLVYNDLKPENIMLT--EEQLKLID 224

>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens} Length = 317

 Score = 67.8 bits (166), Expect = 5e-13
 Identities = 33/172 (19%), Positives = 59/172 (34%), Gaps = 15/172 (8%)

Query: 21  SNKVYSGKVALSSLNNSSRNKTIEIGGKKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALK 80
            +  +    +    N   +   + I  K Y      G+GGF+ V       D     ALK
Sbjct: 2   GSSHHHHHHSSGRENLYFQGHMVIIDNKHYLFIQKLGEGGFSYVDLVEGLHDGH-FYALK 60

Query: 81  I-------QKPAFPWEFYMYRQLDQR--ISGRERSSFGFAHRIHLYSDYSILVCDYLSQG 131
                    +     E  M+R  +    +            +   +     L+  +  +G
Sbjct: 61  RILCHEQQDREEAQREADMHRLFNHPNILRLVAYCLRERGAKHEAW-----LLLPFFKRG 115

Query: 132 TLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLI 183
           TL + I      G  + E   ++  + +   LE++H  G  H D KP N+L+
Sbjct: 116 TLWNEIERLKDKGNFLTEDQILWLLLGICRGLEAIHAKGYAHRDLKPTNILL 167

>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} Length = 413

 Score = 66.6 bits (162), Expect = 2e-12
 Identities = 22/165 (13%), Positives = 51/165 (30%), Gaps = 43/165 (26%)

Query: 57  GQGGFAKVFKAYVNGDPED--VVALKI--------------------------------- 81
           GQ       +A    D E      + +                                 
Sbjct: 87  GQEDPYAYLEAT---DQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQ 143

Query: 82  --QKPAFPWEFYMYRQLDQRISGRERSSFGFAHRIHLYSDYSILVCDYLSQGTLQDAINS 139
                 F + F + +   ++   R R        +  +  Y  +  +     T  + + S
Sbjct: 144 AKVHLRFIFPFDLVKDPQKKKMIRVRLDERDMWVLSRFFLYPRMQSNL---QTFGEVLLS 200

Query: 140 YVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIR 184
           +    KS+     +  T++++ +L SLH  G++H   +P ++++ 
Sbjct: 201 HSSTHKSLVHHARLQLTLQVIRLLASLHHYGLVHTYLRPVDIVLD 245

>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens} Length = 345

 Score = 66.3 bits (162), Expect = 2e-12
 Identities = 31/157 (19%), Positives = 59/157 (37%), Gaps = 24/157 (15%)

Query: 45  IGGKKYQIKGCAGQGGFAKVFKAY--VNGDPEDVVALKIQKPAFP---WEFYMYRQLDQR 99
           + G ++ +    G GGF  ++ A+     + +    +K++         E   Y+++ ++
Sbjct: 34  MEGNQWVLGKKIGSGGFGLIYLAFPTNKPEKDARHVVKVEYQENGPLFSELKFYQRVAKK 93

Query: 100 ISGRERSS------------FGFAHRIHLYSDYSILVCDYLSQGTLQDAINSYVVIGK-S 146
              ++               +G          Y  +V + L    LQ         G   
Sbjct: 94  DCIKKWIERKQLDYLGIPLFYGSGLTEFKGRSYRFMVMERLGI-DLQKISGQN---GTFK 149

Query: 147 MEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLI 183
              VL +   I ML +LE +H+   +HGD K  NLL+
Sbjct: 150 KSTVLQL--GIRMLDVLEYIHENEYVHGDIKAANLLL 184

>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A* Length = 330

 Score = 65.5 bits (160), Expect = 3e-12
 Identities = 34/149 (22%), Positives = 66/149 (44%), Gaps = 26/149 (17%)

Query: 45  IGGKKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQK-----PAFPWEFYMYRQLDQR 99
           + G  +++    G G F ++         E V A+K++      P    E+  Y+QL   
Sbjct: 6   MVGPNFRVGKKIGCGNFGELRLGKNLYTNEYV-AIKLEPMKSRAPQLHLEYRFYKQL--- 61

Query: 100 ISGRERSSFGFAHRIHLY---SDYSILVCDYLSQGTLQDAINSYVVIGK--SMEEVLCIY 154
                 S  G   +++ +     Y+ +V + L   +L+D  +      +  S++ VL I 
Sbjct: 62  -----GSGDGIP-QVYYFGPCGKYNAMVLELLGP-SLEDLFDLC---DRTFSLKTVLMI- 110

Query: 155 YTIEMLCILESLHDVGIIHGDFKPDNLLI 183
             I+++  +E +H   +I+ D KP+N LI
Sbjct: 111 -AIQLISRMEYVHSKNLIYRDVKPENFLI 138

>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group} Length = 483

 Score = 66.2 bits (161), Expect = 3e-12
 Identities = 40/170 (23%), Positives = 76/170 (44%), Gaps = 28/170 (16%)

Query: 47  GKKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQK-----PAFPWEFYMYRQLDQRIS 101
           G K+++    G G F +++    N    + VA+K++      P   +E  +YR L     
Sbjct: 6   GNKFRLGRKIGSGSFGEIYLG-TNIQTNEEVAIKLENVKTKHPQLLYESKIYRIL----- 59

Query: 102 GRERSSFGFAHRIHLY---SDYSILVCDYLSQGTLQDAINSYVVIGK--SMEEVLCIYYT 156
              +   G    +  +    DY++LV D L   +L+D  N      +  S++ VL +   
Sbjct: 60  ---QGGTGIP-NVRWFGVEGDYNVLVMDLLGP-SLEDLFNF---CSRKLSLKTVLML--A 109

Query: 157 IEMLCILESLHDVGIIHGDFKPDNLLIRYARD--ELTVLDHDRSGPWQDQ 204
            +M+  +E +H    +H D KPDN L+   R   ++ ++D   +  ++D 
Sbjct: 110 DQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKKYRDT 159

>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A* Length = 298

 Score = 65.1 bits (159), Expect = 4e-12
 Identities = 37/157 (23%), Positives = 69/157 (43%), Gaps = 29/157 (18%)

Query: 37  SSRNKTIEIGGKKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQK-----PAFPWEFY 91
           S +N  +   G  Y++    G+G F  +F+   N      VA+K +      P    E+ 
Sbjct: 2   SGQNNVV---GVHYKVGRRIGEGSFGVIFEG-TNLLNNQQVAIKFEPRRSDAPQLRDEYR 57

Query: 92  MYRQLDQRISGRERSSFGFAHRIHLY---SDYSILVCDYLSQGTLQDAINSYVVIGK--S 146
            Y+ L            G    ++ +     +++LV D L   +L+D ++     G+  S
Sbjct: 58  TYKLL--------AGCTGIP-NVYYFGQEGLHNVLVIDLLGP-SLEDLLDLC---GRKFS 104

Query: 147 MEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLI 183
           ++ V       +ML  ++S+H+  +++ D KPDN LI
Sbjct: 105 VKTVAMA--AKQMLARVQSIHEKSLVYRDIKPDNFLI 139

>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A Length = 296

 Score = 65.1 bits (159), Expect = 4e-12
 Identities = 36/170 (21%), Positives = 72/170 (42%), Gaps = 28/170 (16%)

Query: 47  GKKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQK-----PAFPWEFYMYRQLDQRIS 101
           G +Y++    G G F  ++    +    + VA+K++      P    E  +Y+ +     
Sbjct: 8   GNRYRLGRKIGSGSFGDIYLG-TDIAAGEEVAIKLECVKTKHPQLHIESKIYKMM----- 61

Query: 102 GRERSSFGFAHRIHLY---SDYSILVCDYLSQGTLQDAINSYVVIGK--SMEEVLCIYYT 156
              +   G    I       DY+++V + L   +L+D  N      +  S++ VL +   
Sbjct: 62  ---QGGVGIP-TIRWCGAEGDYNVMVMELLGP-SLEDLFNF---CSRKFSLKTVLLL--A 111

Query: 157 IEMLCILESLHDVGIIHGDFKPDNLLIRYARDE--LTVLDHDRSGPWQDQ 204
            +M+  +E +H    IH D KPDN L+   +    + ++D   +  ++D 
Sbjct: 112 DQMISRIEYIHSKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDA 161

>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A Length = 377

 Score = 65.4 bits (159), Expect = 5e-12
 Identities = 19/159 (11%), Positives = 50/159 (31%), Gaps = 33/159 (20%)

Query: 57  GQGGFAKVFKAYVNGDPEDVVALKI----------QKPAFPWEFYMYRQLDQRISGRERS 106
           GQ       +A  + +  +   + +                 E    R L    + ++  
Sbjct: 82  GQEDPYAYLEA-TDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAK 140

Query: 107 S----------------------FGFAHRIHLYSDYSILVCDYLSQGTLQDAINSYVVIG 144
                                        + + S + +      +  T  + + S+    
Sbjct: 141 VHLRFIFPFDLVKDPQKKKMIRVRLDERDMWVLSRFFLYPRMQSNLQTFGEVLLSHSSTH 200

Query: 145 KSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLI 183
           KS+     +  T++++ +L SLH  G++H   +P ++++
Sbjct: 201 KSLVHHARLQLTLQVIRLLASLHHYGLVHTYLRPVDIVL 239

>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A Length = 364

 Score = 63.2 bits (154), Expect = 2e-11
 Identities = 33/160 (20%), Positives = 60/160 (37%), Gaps = 27/160 (16%)

Query: 45  IGGKKYQIKGCAGQGGFAKVFKAYVNGDPE----DVVALKIQKPAFP-----WEFYMYRQ 95
           +    +++    GQGGF  ++ A +N            +K++           +FY    
Sbjct: 32  MAAAAWKVGLPIGQGGFGCIYLADMNSSESVGSDAPCVVKVEPSDNGPLFTELKFYQRAA 91

Query: 96  LDQRISGRERSS----------FGFAHRIHLYSDYSILVCDYLSQGTLQDAINSYVVIGK 145
             ++I    R+           +G          Y  ++ D      LQ    +     K
Sbjct: 92  KPEQIQKWIRTRKLKYLGVPKYWGSGLHDKNGKSYRFMIMDRFGS-DLQKIYEAN---AK 147

Query: 146 --SMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLI 183
             S + VL +  ++ +L ILE +H+   +HGD K  NLL+
Sbjct: 148 RFSRKTVLQL--SLRILDILEYIHEHEYVHGDIKASNLLL 185

>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens} Length = 352

 Score = 63.2 bits (154), Expect = 2e-11
 Identities = 26/157 (16%), Positives = 57/157 (36%), Gaps = 21/157 (13%)

Query: 45  IGGKKYQIKGCAGQGGFAKVFKAY-------VNGDPEDVVALKI--QKPAFPWEFYMY-R 94
             G+++++K    +     +++A         +G  +   +LK+  +      E   + R
Sbjct: 39  KSGRQWKLKSFQTRDNQGILYEAAPTSTLTCDSGPQKQKFSLKLDAKDGRLFNEQNFFQR 98

Query: 95  QLDQRISGRERSSFGFAH----RIHLY----SDYSILVCDYLSQGTLQDAINSYVVIGKS 146
                   + +  +            +      Y  LV   L + +LQ A++       S
Sbjct: 99  AAKPLQVNKWKKLYSTPLLAIPTCMGFGVHQDKYRFLVLPSLGR-SLQSALDVSPKHVLS 157

Query: 147 MEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLI 183
              VL +     +L  LE LH+   +HG+   +N+ +
Sbjct: 158 ERSVLQV--ACRLLDALEFLHENEYVHGNVTAENIFV 192

>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A* Length = 371

 Score = 62.8 bits (152), Expect = 3e-11
 Identities = 37/305 (12%), Positives = 73/305 (23%), Gaps = 70/305 (22%)

Query: 46  GGKKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKI------------------------ 81
           G +K ++      G  + VF    + +  +  ALK+                        
Sbjct: 60  GERKLKLVEPLRVGDRSVVFLV-RDVERLEDFALKVFTMGAENSRSELERLHEATFAAAR 118

Query: 82  ----------QKPAFPWEFYMYRQLDQRISGRERSSFGFAHRIHLYSDYSILVCDYLSQG 131
                      +              Q    +           +          D     
Sbjct: 119 LLGESPEEARDRRRLLLPSDAVAVQSQPPFAQLSPGQDDYAVANYLLLMPAASVDL---E 175

Query: 132 TLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELT 191
            L   ++   V       +     T +++ +  +L   G++HG F PDNL I        
Sbjct: 176 LLFSTLDFVYVFRGDEGILALHILTAQLIRLAANLQSKGLVHGHFTPDNLFI-------- 227

Query: 192 VLDHDRSGPWQDQGLCLVDWGRGIDLHLFPDNMEFEGDCRTSGFRCIEM--QEKKPWKFQ 249
                  G      L L D        L+              +   E        +   
Sbjct: 228 ----MPDGR-----LMLGDVS-----ALWKVGTRGPASSVPVTYAPREFLNASTATFTHA 273

Query: 250 VDTYGLCAIVHMML-------HNSYMEIEKKASPDGGLVYLPKLSFKRYWKV-ELWKSLF 301
           ++ + L   ++ +          +         P   +     L+F     + +  K+L 
Sbjct: 274 LNAWQLGLSIYRVWCLFLPFGLVTPGIKGSWKRPSLRVPGTDSLAFGSCTPLPDFVKTLI 333

Query: 302 TNLLN 306
              LN
Sbjct: 334 GRFLN 338

>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens} Length = 337

 Score = 61.7 bits (150), Expect = 7e-11
 Identities = 37/173 (21%), Positives = 66/173 (38%), Gaps = 30/173 (17%)

Query: 30  ALSSLNNSSRNKTIEIGGKKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFPWE 89
           A     +    +T+E+G  + +++    +GGFA V++A   G   +  ALK         
Sbjct: 10  ASGRDQSDFVGQTVELGELRLRVRRVLAEGGFAFVYEAQDVGSGRE-YALKRL------- 61

Query: 90  FYMYRQLDQRISGRE----RSSFGFAHRIHLYS------------DYSILVCDYLSQGTL 133
                +   R   +E    +   G  + +   S                L+   L +G L
Sbjct: 62  -LSNEEEKNRAIIQEVCFMKKLSGHPNIVQFCSAASIGKEESDTGQAEFLLLTELCKGQL 120

Query: 134 QDAINSYVVIGK-SMEEVLCIYYTIEMLCILESLHDVG--IIHGDFKPDNLLI 183
            + +      G  S + VL I+Y  +    ++ +H     IIH D K +NLL+
Sbjct: 121 VEFLKKMESRGPLSCDTVLKIFY--QTCRAVQHMHRQKPPIIHRDLKVENLLL 171

>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A* Length = 289

 Score = 58.9 bits (143), Expect = 5e-10
 Identities = 30/144 (20%), Positives = 52/144 (36%), Gaps = 14/144 (9%)

Query: 48  KKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFPWEFYMYRQLDQRISGRERSS 107
            ++      G G F  VFK  V      + A+K  K            L +  +      
Sbjct: 11  TEFHELEKIGSGEFGSVFKC-VKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQ 69

Query: 108 -------FG-FAHRIHLYSDYSILVCDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEM 159
                  F  +A   H+      +  +Y + G+L DAI+    I    +E       +++
Sbjct: 70  HSHVVRYFSAWAEDDHML-----IQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQV 124

Query: 160 LCILESLHDVGIIHGDFKPDNLLI 183
              L  +H + ++H D KP N+ I
Sbjct: 125 GRGLRYIHSMSLVHMDIKPSNIFI 148

>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A* Length = 336

 Score = 57.4 bits (139), Expect = 1e-09
 Identities = 36/164 (21%), Positives = 56/164 (34%), Gaps = 24/164 (14%)

Query: 26  SGKVALSSLNNSSRNKTIEIGGKKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALK-IQKP 84
            G +    L         E+       +   G+G F +V +   +       A+K ++  
Sbjct: 38  EGVLLTEKLKPVDYEYREEV--HWMTHQPRVGRGSFGEVHRM-KDKQTGFQCAVKKVRLE 94

Query: 85  AFPW-EFYMYRQLD-QRI---SGRERSSFGFAHRIHLYSDYSILVCDYLSQGTLQDAINS 139
            F   E      L   RI    G  R          +      +  + L  G+L   I  
Sbjct: 95  VFRVEELVACAGLSSPRIVPLYGAVR------EGPWVN-----IFMELLEGGSLGQLIKQ 143

Query: 140 YVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLI 183
                  + E   +YY  + L  LE LH   I+HGD K DN+L+
Sbjct: 144 M----GCLPEDRALYYLGQALEGLEYLHTRRILHGDVKADNVLL 183

>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens} Length = 311

 Score = 57.3 bits (139), Expect = 2e-09
 Identities = 36/172 (20%), Positives = 62/172 (36%), Gaps = 20/172 (11%)

Query: 20  RSNKVYSGKVALSSLNNSSRNKTIEIGGKKYQIKGCAGQGGFAKVFKAYVNGDPEDVVAL 79
            S +  + +   S   + SR ++     + +Q     G G + +VFK     D   + A+
Sbjct: 31  VSFRGEASETLQSPGYDPSRPESF--FQQSFQRLSRLGHGSYGEVFKVRSKEDGR-LYAV 87

Query: 80  KIQKPAFPWEFYMYRQLDQRISGRERSS--------FGFAHRIHLYSDYSILVCDYLSQG 131
           K     F       R+L +  S  +             +     LY     L  +     
Sbjct: 88  KRSMSPFRGPKDRARKLAEVGSHEKVGQHPCCVRLEQAWEEGGILY-----LQTEL-CGP 141

Query: 132 TLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLI 183
           +LQ    ++   G S+ E     Y  + L  L  LH  G++H D KP N+ +
Sbjct: 142 SLQQHCEAW---GASLPEAQVWGYLRDTLLALAHLHSQGLVHLDVKPANIFL 190

>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ... Length = 420

 Score = 57.8 bits (140), Expect = 2e-09
 Identities = 37/166 (22%), Positives = 58/166 (34%), Gaps = 40/166 (24%)

Query: 49  KYQIKGCAGQGGFAKVFKAYVNGDPEDVVALK-IQKPAFPWEFYMYRQLDQRISGRE--- 104
            Y      G G F  V++A +    E +VA+K +               D+R   RE   
Sbjct: 55  SYTDTKVIGNGSFGVVYQAKLCDSGE-LVAIKKVL-------------QDKRFKNRELQI 100

Query: 105 ----------------RSSFGFAHRIHLYSDYSILVCDYLSQGTLQDAINSYVVIGKSME 148
                            SS      ++L      LV DY+ + T+      Y    +++ 
Sbjct: 101 MRKLDHCNIVRLRYFFYSSGEKKDEVYLN-----LVLDYVPE-TVYRVARHYSRAKQTLP 154

Query: 149 EVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLD 194
            +    Y  ++   L  +H  GI H D KP NLL+      L + D
Sbjct: 155 VIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCD 200

>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis} Length = 394

 Score = 56.6 bits (137), Expect = 4e-09
 Identities = 46/205 (22%), Positives = 73/205 (35%), Gaps = 48/205 (23%)

Query: 17  GYHRSNKVYSGKVALSSLNNSSRNKTIEIGGK-------KYQIKGCAGQGGFAKVFKAYV 69
            +  SN   +G       + +   K +   GK        Y      G G F  VF+A +
Sbjct: 2   SFTMSNAPLNGVKLNPLDDPNKVIKVLASDGKTGEQREIAYTNCKVIGNGSFGVVFQAKL 61

Query: 70  NGDPEDVVALK-IQKPAFPWEFYMYRQLDQRISGRE-------------------RSSFG 109
               E  VA+K +               D+R   RE                    S+  
Sbjct: 62  VESDE--VAIKKVL-------------QDKRFKNRELQIMRIVKHPNVVDLKAFFYSNGD 106

Query: 110 FAHRIHLYSDYSILVCDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDV 169
               + L      LV +Y+ + T+  A   Y  + ++M  +L   Y  ++L  L  +H +
Sbjct: 107 KKDEVFLN-----LVLEYVPE-TVYRASRHYAKLKQTMPMLLIKLYMYQLLRSLAYIHSI 160

Query: 170 GIIHGDFKPDNLLIRYARDELTVLD 194
           GI H D KP NLL+      L ++D
Sbjct: 161 GICHRDIKPQNLLLDPPSGVLKLID 185

>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A Length = 286

 Score = 55.9 bits (135), Expect = 4e-09
 Identities = 19/147 (12%), Positives = 42/147 (28%), Gaps = 28/147 (19%)

Query: 50  YQIKGCAGQGGFAKVFKAYVNGDPED-----VVALKIQKPAFPWEFYMYRQLDQRISGRE 104
           Y++    G     + ++A       D      VAL    P           + Q    R 
Sbjct: 33  YRLLIFHGGVPPLQFWQAL------DTALDRQVALTFVDPQGVLP----DDVLQETLSRT 82

Query: 105 RSSFGFAH----RIH---LYSDYSILVCDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTI 157
                       R+          ++V +++  G+LQ+  ++      S    +      
Sbjct: 83  LRLSRIDKPGVARVLDVVHTRAGGLVVAEWIRGGSLQEVADT----SPSPVGAIRA--MQ 136

Query: 158 EMLCILESLHDVGIIHGDFKPDNLLIR 184
            +    ++ H  G+      P  + + 
Sbjct: 137 SLAAAADAAHRAGVALSIDHPSRVRVS 163

>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A Length = 303

 Score = 55.8 bits (135), Expect = 5e-09
 Identities = 32/152 (21%), Positives = 51/152 (33%), Gaps = 26/152 (17%)

Query: 49  KYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKI------QKPAFPWEFYMYRQLD----- 97
            ++     GQG F +V KA  N       A+K       +      E  +   L+     
Sbjct: 7   DFEEIAVLGQGAFGQVVKA-RNALDSRYYAIKKIRHTEEKLSTILSEVMLLASLNHQYVV 65

Query: 98  ------QRISGRERSSFGFAHRIHLYSDYSILVCDYLSQGTLQDAINSYVVIGKSMEEVL 151
                        +       +  L+     +  +Y   GTL D I+S      + +   
Sbjct: 66  RYYAAWLERRNFVKPMTAVKKKSTLF-----IQMEYCENGTLYDLIHSE---NLNQQRDE 117

Query: 152 CIYYTIEMLCILESLHDVGIIHGDFKPDNLLI 183
                 ++L  L  +H  GIIH D KP N+ I
Sbjct: 118 YWRLFRQILEALSYIHSQGIIHRDLKPMNIFI 149

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 56.8 bits (136), Expect = 5e-09
 Identities = 52/401 (12%), Positives = 113/401 (28%), Gaps = 128/401 (31%)

Query: 5   LKQINSQIMKFEGYHRS----NKVYSGKVALSSLNNS------SRNKTI---EIGGKKYQ 51
           ++    +++K + Y         V + K   ++ N S      +R K +           
Sbjct: 230 IQAELRRLLKSKPYENCLLVLLNVQNAKA-WNAFNLSCKILLTTRFKQVTDFLSAATTTH 288

Query: 52  IKGCAGQGGFAK-----VFKAYVNGDPED--------------VVALKIQKPAFPWEFYM 92
           I                +   Y++  P+D              ++A  I+     W+ + 
Sbjct: 289 ISLDHHSMTLTPDEVKSLLLKYLDCRPQDLPREVLTTNPRRLSIIAESIRDGLATWDNWK 348

Query: 93  YRQLDQRISGRERS--SFGFAHRIHLYSDYSILVCDYLSQGTLQDAINSYVVIGKSMEEV 150
           +   D+  +  E S      A    ++   S+                    I      +
Sbjct: 349 HVNCDKLTTIIESSLNVLEPAEYRKMFDRLSVFPPS--------------AHI---PTIL 391

Query: 151 LCIYY----TIEMLCILESLHDVGIIHGDFKPDN-------LLIRYARDELTVLDHDRSG 199
           L + +      +++ ++  LH   ++    K          L ++   +    L H    
Sbjct: 392 LSLIWFDVIKSDVMVVVNKLHKYSLVEKQPKESTISIPSIYLELKVKLENEYAL-HRS-- 448

Query: 200 PWQDQGLCLVD---WGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQEKKPWKFQVDTYGLC 256
                   +VD     +  D                                 +D Y   
Sbjct: 449 --------IVDHYNIPKTFDSDDLIPP-------------------------YLDQYFYS 475

Query: 257 AIVHMMLHNSYMEIEKKASPDGGLVYLPK--LSFKRYW---KVELWKSLFTNLLNMSSGN 311
            I H   H   +E  ++ +            L F+  +   K+        +    +SG+
Sbjct: 476 HIGH---HLKNIEHPERMT------LFRMVFLDFR--FLEQKIRH-----DSTAWNASGS 519

Query: 312 DKEVLQNLQKSFQDYLCSN----PQLLKNLKELLAKQRASL 348
               LQ L+  ++ Y+C N     +L+  + + L K   +L
Sbjct: 520 ILNTLQQLKF-YKPYICDNDPKYERLVNAILDFLPKIEENL 559

>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A* Length = 335

 Score = 55.4 bits (134), Expect = 9e-09
 Identities = 34/155 (21%), Positives = 61/155 (39%), Gaps = 38/155 (24%)

Query: 47  GKKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKI------QKPAFPWEFYMYRQLDQRI 100
            ++Y      G+GGFAK F+   + D ++V A KI       KP      +   ++   I
Sbjct: 40  RRRYVRGRFLGKGGFAKCFEI-SDADTKEVFAGKIVPKSLLLKP------HQREKMSMEI 92

Query: 101 SGRERSSFGFAHR-------IHLY-----SDYSILVCDYLSQGTLQDAINSYVVIGKSME 148
           S          HR       +  +     +D+  +V +   + +L +         K++ 
Sbjct: 93  S---------IHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLE----LHKRRKALT 139

Query: 149 EVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLI 183
           E    YY  +++   + LH   +IH D K  NL +
Sbjct: 140 EPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFL 174

>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A* Length = 294

 Score = 54.9 bits (133), Expect = 1e-08
 Identities = 34/155 (21%), Positives = 60/155 (38%), Gaps = 38/155 (24%)

Query: 47  GKKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKI------QKPAFPWEFYMYRQLDQRI 100
            ++Y      G+GGFAK F+   + D ++V A KI       KP          ++   I
Sbjct: 14  RRRYVRGRFLGKGGFAKCFEI-SDADTKEVFAGKIVPKSLLLKPH------QREKMSMEI 66

Query: 101 SGRERSSFGFAHR-------IHLY-----SDYSILVCDYLSQGTLQDAINSYVVIGKSME 148
           S          HR       +  +     +D+  +V +   + +L +         K++ 
Sbjct: 67  S---------IHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLE----LHKRRKALT 113

Query: 149 EVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLI 183
           E    YY  +++   + LH   +IH D K  NL +
Sbjct: 114 EPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFL 148

>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A* Length = 299

 Score = 54.7 bits (132), Expect = 1e-08
 Identities = 30/157 (19%), Positives = 58/157 (36%), Gaps = 31/157 (19%)

Query: 48  KKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFPWE------------------ 89
             ++   C G+GGF  VF+A    D  +    +I+ P                       
Sbjct: 5   TDFEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPG 64

Query: 90  ---FYMYRQLDQRISGRERSSFGFAHRIHLYSDYSILVCDYLSQGTLQDAINSYVVIGKS 146
              ++            + SS     +++LY     +      +  L+D +N    I + 
Sbjct: 65  IVRYFNAWLEKNTTEKLQPSS----PKVYLY-----IQMQLCRKENLKDWMNGRCTI-EE 114

Query: 147 MEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLI 183
            E  +C++  +++   +E LH  G++H D KP N+  
Sbjct: 115 RERSVCLHIFLQIAEAVEFLHSKGLMHRDLKPSNIFF 151

>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens} Length = 278

 Score = 54.5 bits (132), Expect = 1e-08
 Identities = 30/154 (19%), Positives = 57/154 (37%), Gaps = 37/154 (24%)

Query: 48  KKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKI------QKPAFPWEFYMYRQLDQRIS 101
           + +++    G+G FA V++A  +      VA+K+       K        M +++   + 
Sbjct: 11  EDFKVGNLLGKGSFAGVYRA-ESIHTGLEVAIKMIDKKAMYKAG------MVQRVQNEVK 63

Query: 102 GRERSSFGFAHR-------IHLY-----SDYSILVCDYLSQGTLQDAINSYVVIGKSMEE 149
                     H        + LY     S+Y  LV +    G +   +       K   E
Sbjct: 64  ---------IHCQLKHPSILELYNYFEDSNYVYLVLEMCHNGEMNRYL---KNRVKPFSE 111

Query: 150 VLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLI 183
               ++  +++  +  LH  GI+H D    NLL+
Sbjct: 112 NEARHFMHQIITGMLYLHSHGILHRDLTLSNLLL 145

>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens} Length = 396

 Score = 54.5 bits (131), Expect = 2e-08
 Identities = 28/165 (16%), Positives = 63/165 (38%), Gaps = 31/165 (18%)

Query: 45  IGGKKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKI------QKPAFPW--EFYMYRQL 96
                + +    GQG  A VF+   +    D+ A+K+       +P      EF + ++L
Sbjct: 6   TSNHLWLLSDILGQGATANVFRG-RHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKL 64

Query: 97  D-QRISGRERSSFGFAHRIHLY-------SDYSILVCDYLSQGTLQDAINSYVVIGKSME 148
           + + I             + L+       + + +L+ ++   G+L   +         + 
Sbjct: 65  NHKNI-------------VKLFAIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYG-LP 110

Query: 149 EVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVL 193
           E   +    +++  +  L + GI+H + KP N++     D  +V 
Sbjct: 111 ESEFLIVLRDVVGGMNHLRENGIVHRNIKPGNIMRVIGEDGQSVY 155

>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens} Length = 319

 Score = 53.6 bits (129), Expect = 3e-08
 Identities = 27/165 (16%), Positives = 61/165 (36%), Gaps = 31/165 (18%)

Query: 45  IGGKKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKI--------QKPAFPWEFYMYRQL 96
                + +    GQG  A VF+   +    D+ A+K+               EF + ++L
Sbjct: 6   TSNHLWLLSDILGQGATANVFRG-RHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKL 64

Query: 97  D-QRISGRERSSFGFAHRIHLY-------SDYSILVCDYLSQGTLQDAINSYVVIGKSME 148
           + + I             + L+       + + +L+ ++   G+L   +         + 
Sbjct: 65  NHKNI-------------VKLFAIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYG-LP 110

Query: 149 EVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVL 193
           E   +    +++  +  L + GI+H + KP N++     D  +V 
Sbjct: 111 ESEFLIVLRDVVGGMNHLRENGIVHRNIKPGNIMRVIGEDGQSVY 155

>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A* Length = 397

 Score = 53.4 bits (128), Expect = 4e-08
 Identities = 37/258 (14%), Positives = 77/258 (29%), Gaps = 52/258 (20%)

Query: 49  KYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQK------PAFPWEFYMYRQLDQRISG 102
           +Y +    G G F+ V+ ++ +   +  VA+K+ K           E  +     + +  
Sbjct: 38  RYHVIRKLGWGHFSTVWLSW-DIQGKKFVAMKVVKSAEHYTETALDEIRLL----KSVRN 92

Query: 103 RERSSFGFAHRIHLYSDYSI---------LVCDYLSQGTLQDAINSYVVIGKSMEEVLCI 153
            + +       + L  D+ I         +V + L    L   I       + +      
Sbjct: 93  SDPNDPNREMVVQLLDDFKISGVNGTHICMVFEVLGH-HLLKWIIKS--NYQGLPLPCVK 149

Query: 154 YYTIEMLCILESLH-DVGIIHGDFKPDNLLIRYARDELTVLDHDRSGPWQDQGLCLVD-- 210
               ++L  L+ LH    IIH D KP+N+L+      +  L  + +   +          
Sbjct: 150 KIIQQVLQGLDYLHTKCRIIHTDIKPENILLSVNEQYIRRLAAEATEWQRSGAPPPSGSA 209

Query: 211 --------------WGRGIDLHL-----------FPDNMEFEGDCRTSGFRCIEMQEKKP 245
                              +                 +  F  D +T  +R +E+     
Sbjct: 210 VSTAPATAGNFLVNPLEPKNAEKLKVKIADLGNACWVHKHFTEDIQTRQYRSLEVLIGSG 269

Query: 246 WKFQVDTYGL-CAIVHMM 262
           +    D +   C    + 
Sbjct: 270 YNTPADIWSTACMAFELA 287

>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A* Length = 355

 Score = 53.1 bits (128), Expect = 5e-08
 Identities = 31/187 (16%), Positives = 66/187 (35%), Gaps = 32/187 (17%)

Query: 44  EIGGKKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKI--QKPAFPWEFYMYRQ------ 95
           +   ++Y+I G  G+G F KV +   +   +  VALKI      +               
Sbjct: 15  DWLQERYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNVGKY------REAARLEIN 68

Query: 96  LDQRISGRERSSFG--------FAHRIHLYSDYSILVCDYLSQGTLQDAINSYVVIGKSM 147
           + ++I  +++ +          F    H+      +  + L +    + +         +
Sbjct: 69  VLKKIKEKDKENKFLCVLMSDWFNFHGHM-----CIAFELLGK-NTFEFLKENNFQPYPL 122

Query: 148 EEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSGPWQ--DQG 205
             V       ++   L  LH+  + H D KP+N+L   +  E    +H         +  
Sbjct: 123 PHVRH--MAYQLCHALRFLHENQLTHTDLKPENILFVNSEFETLYNEHKSCEEKSVKNTS 180

Query: 206 LCLVDWG 212
           + + D+G
Sbjct: 181 IRVADFG 187

>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens} Length = 412

 Score = 53.2 bits (128), Expect = 5e-08
 Identities = 22/76 (28%), Positives = 40/76 (52%), Gaps = 8/76 (10%)

Query: 108 FGFAHRIHLYSDYSILVCDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLH 167
           F F    +LY     LV +Y   G L   ++ +   G+ +   +  +Y  E++  ++S+H
Sbjct: 128 FAFQDENYLY-----LVMEYYVGGDLLTLLSKF---GERIPAEMARFYLAEIVMAIDSVH 179

Query: 168 DVGIIHGDFKPDNLLI 183
            +G +H D KPDN+L+
Sbjct: 180 RLGYVHRDIKPDNILL 195

>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* Length = 429

 Score = 53.2 bits (128), Expect = 5e-08
 Identities = 42/168 (25%), Positives = 74/168 (44%), Gaps = 32/168 (19%)

Query: 44  EIGGKKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFPWEFYMYRQ------LD 97
           +    +Y++    G+G F +V KAY +   +  VALK+ +     E   +RQ      + 
Sbjct: 93  DHVAYRYEVLKVIGKGSFGQVVKAYDHKVHQ-HVALKMVRN----EKRFHRQAAEEIRIL 147

Query: 98  QRISGRERSSFG--------FAHRIHLYSDYSILVCDYLSQGTLQDAI--NSYVVIGKSM 147
           + +  +++ +          F  R H+      +  + LS   L + I  N +   G S+
Sbjct: 148 EHLRKQDKDNTMNVIHMLENFTFRNHIC-----MTFELLSM-NLYELIKKNKFQ--GFSL 199

Query: 148 EEVLCIYYTIEMLCILESLHDVGIIHGDFKPDN-LLIRYARDELTVLD 194
             V    +   +L  L++LH   IIH D KP+N LL +  R  + V+D
Sbjct: 200 PLVR--KFAHSILQCLDALHKNRIIHCDLKPENILLKQQGRSGIKVID 245

>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens} Length = 298

 Score = 52.3 bits (126), Expect = 7e-08
 Identities = 34/177 (19%), Positives = 65/177 (36%), Gaps = 36/177 (20%)

Query: 35  NNSSRNKTIEIGGKKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKI--------QKPAF 86
           ++ S    +++   +Y +K   G+G +  V  AY N +     A+K+        Q    
Sbjct: 2   SSGSSGDCVQLN--QYTLKDEIGKGSYGVVKLAY-NENDNTYYAMKVLSKKKLIRQAGFP 58

Query: 87  PWEFYMYRQLDQRISGRERSSFGFAHR-------------IHLY-------SDYSILVCD 126
                   +       + R      ++             + L         D+  +V +
Sbjct: 59  RRPPPRGTRPAPGGCIQPRGPIEQVYQEIAILKKLDHPNVVKLVEVLDDPNEDHLYMVFE 118

Query: 127 YLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLI 183
            ++QG + +     V   K + E    +Y  +++  +E LH   IIH D KP NLL+
Sbjct: 119 LVNQGPVME-----VPTLKPLSEDQARFYFQDLIKGIEYLHYQKIIHRDIKPSNLLV 170

>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A* Length = 310

 Score = 51.9 bits (125), Expect = 1e-07
 Identities = 28/156 (17%), Positives = 53/156 (33%), Gaps = 38/156 (24%)

Query: 48  KKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFPWEFYMYRQLDQRISGRERSS 107
             ++I+   G+G F++V++A    D   V   K+Q             +   +  + R+ 
Sbjct: 32  ANFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQ-------------IFDLMDAKARAD 78

Query: 108 F--------------------GFAHRIHLYSDYSILVCDYLSQGTLQDAINSYVVIGKSM 147
                                 F     L      +V +    G L   I  +    + +
Sbjct: 79  CIKEIDLLKQLNHPNVIKYYASFIEDNELN-----IVLELADAGDLSRMIKHFKKQKRLI 133

Query: 148 EEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLI 183
            E     Y +++   LE +H   ++H D KP N+ I
Sbjct: 134 PERTVWKYFVQLCSALEHMHSRRVMHRDIKPANVFI 169

>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A* Length = 303

 Score = 51.6 bits (124), Expect = 1e-07
 Identities = 42/167 (25%), Positives = 59/167 (35%), Gaps = 30/167 (17%)

Query: 34  LNNSSRNKTIEIGGKKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALK------------- 80
           ++  S      I    Y+++   G G  A V  AY     E  VA+K             
Sbjct: 1   MSEDSSALPWSINRDDYELQEVIGSGATAVVQAAYCAPKKE-KVAIKRINLEKCQTSMDE 59

Query: 81  IQKPAFPWEFYMYRQLDQRISGRERSSFGFAHRIHLYSDYSILVCDYLSQGTLQDAINSY 140
           + K     E     Q          +SF    +  L+     LV   LS G++ D I   
Sbjct: 60  LLK-----EIQAMSQCHHPNIVSYYTSF--VVKDELW-----LVMKLLSGGSVLDIIKHI 107

Query: 141 VVIG----KSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLI 183
           V  G      ++E        E+L  LE LH  G IH D K  N+L+
Sbjct: 108 VAKGEHKSGVLDESTIATILREVLEGLEYLHKNGQIHRDVKAGNILL 154

>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II} Length = 383

 Score = 51.7 bits (124), Expect = 1e-07
 Identities = 32/181 (17%), Positives = 58/181 (32%), Gaps = 36/181 (19%)

Query: 48  KKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALK--------------------------- 80
           KKY +    G G F  V + +     +   ALK                           
Sbjct: 7   KKYSLGKTLGTGSFGIVCEVFDIESGK-RFALKKVLQDPRYKNRELDIMKVLDHVNIIKL 65

Query: 81  -------IQKPAFPWEFYMYRQLDQRISGRERSSFGFAHRIHLYSDYSILVCDYLSQGTL 133
                    +   P +           +    +           + Y  ++ +Y+   TL
Sbjct: 66  VDYFYTTGDEEPKPPQPPDDHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYVPD-TL 124

Query: 134 QDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVL 193
              + S++  G+S+   L   Y  ++   +  +H +GI H D KP NLL+    + L + 
Sbjct: 125 HKVLKSFIRSGRSIPMNLISIYIYQLFRAVGFIHSLGICHRDIKPQNLLVNSKDNTLKLC 184

Query: 194 D 194
           D
Sbjct: 185 D 185

>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A* Length = 339

 Score = 51.5 bits (124), Expect = 1e-07
 Identities = 30/187 (16%), Positives = 65/187 (34%), Gaps = 32/187 (17%)

Query: 44  EIGGKKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKI--QKPAFPWEFYMYRQ------ 95
           ++   +Y+I    G+G F KV +   +      VA+KI      +               
Sbjct: 10  DVLSARYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNVDRY------CEAARSEIQ 63

Query: 96  LDQRISGRERSSFG--------FAHRIHLYSDYSILVCDYLSQGTLQDAINSYVVIGKSM 147
           + + ++  + +S          F H  H+      +V + L   +  D I     +   +
Sbjct: 64  VLEHLNTTDPNSTFRCVQMLEWFEHHGHIC-----IVFELLGL-STYDFIKENGFLPFRL 117

Query: 148 EEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSGPW--QDQG 205
           + +       ++   +  LH   + H D KP+N+L   +          +       +  
Sbjct: 118 DHIRK--MAYQICKSVNFLHSNKLTHTDLKPENILFVQSDYTEAYNPKIKRDERTLINPD 175

Query: 206 LCLVDWG 212
           + +VD+G
Sbjct: 176 IKVVDFG 182

>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B* Length = 284

 Score = 51.1 bits (123), Expect = 1e-07
 Identities = 27/149 (18%), Positives = 53/149 (35%), Gaps = 15/149 (10%)

Query: 47  GKKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKI---QKPAFPWEFYMYRQLDQR---- 99
           G  ++     G GGF +VFKA    D      +K           E     +LD      
Sbjct: 10  GMDFKEIELIGSGGFGQVFKAKHRID-GKTYVIKRVKYNNEKAEREVKALAKLDHVNIVH 68

Query: 100 -----ISGRERSSFGFAHRIHLYSDYSILVCDYLSQGTLQDAINSYVVIGKSMEEVLCIY 154
                            +     +    +  ++  +GTL+  I      G+ +++VL + 
Sbjct: 69  YNGCWDGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRR--GEKLDKVLALE 126

Query: 155 YTIEMLCILESLHDVGIIHGDFKPDNLLI 183
              ++   ++ +H   +I+ D KP N+ +
Sbjct: 127 LFEQITKGVDYIHSKKLINRDLKPSNIFL 155

>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens} Length = 326

 Score = 50.5 bits (121), Expect = 3e-07
 Identities = 32/173 (18%), Positives = 69/173 (39%), Gaps = 30/173 (17%)

Query: 30  ALSSLNNSSRNKTIEIGGKK-----YQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKP 84
           +++S + +     I++   +     +++    G G + +V+K       + + A+K+   
Sbjct: 1   SMASDSPARSLDEIDLSALRDPAGIFELVELVGNGTYGQVYKGRHVKTGQ-LAAIKVMD- 58

Query: 85  AFPWEFYMYRQLDQRISG-----RERSS-------FG-FAHRIHLYSDYSI-LVCDYLSQ 130
                  +    ++ I       ++ S        +G F  +     D  + LV ++   
Sbjct: 59  -------VTGDEEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGMDDQLWLVMEFCGA 111

Query: 131 GTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLI 183
           G++ D I      G +++E    Y   E+L  L  LH   +IH D K  N+L+
Sbjct: 112 GSVTDLIK--NTKGNTLKEEWIAYICREILRGLSHLHQHKVIHRDIKGQNVLL 162

>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 3lau_A* 2wtv_A* ... Length = 279

 Score = 50.3 bits (121), Expect = 3e-07
 Identities = 35/154 (22%), Positives = 60/154 (38%), Gaps = 20/154 (12%)

Query: 38  SRNKTIEIGGKKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFPWEFYMYRQLD 97
           S+ +   +    ++I    G+G F  V+ A      + ++ALK+   A   +  +  QL 
Sbjct: 1   SKKRQWALE--DFEIGRPLGKGKFGNVYLA-REKQSKFILALKVLFKAQLEKAGVEHQLR 57

Query: 98  QRISGRER---SSFGFAHRIHLY-----SDYSILVCDYLSQGTLQDAINSYVVIGKSMEE 149
                RE    S     + + LY     +    L+ +Y   GT+       +      +E
Sbjct: 58  -----REVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYR----ELQKLSKFDE 108

Query: 150 VLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLI 183
                Y  E+   L   H   +IH D KP+NLL+
Sbjct: 109 QRTATYITELANALSYCHSKRVIHRDIKPENLLL 142

>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X* Length = 348

 Score = 50.5 bits (121), Expect = 3e-07
 Identities = 32/186 (17%), Positives = 61/186 (32%), Gaps = 27/186 (14%)

Query: 20  RSNKVYSGKVALSSLNNSSRNKTIEIGGKKYQIKGCAGQGGFAKVFKAYVNGDPEDVVAL 79
               + S    L  LN   + K   I    Y+I     QG F K+     +       AL
Sbjct: 5   SMKDILSNYSNLIYLNKYVKEKDKYIN--DYRIIRTLNQGKFNKIILCEKDNK---FYAL 59

Query: 80  KI-QKPAFPWEFYMYRQLDQRISG--------RER---SSFGFAHRIHLY-----SDYSI 122
           K  +K     +    +  + +IS          E    +     + +         D   
Sbjct: 60  KKYEKSLLEKKRDFTKSNNDKISIKSKYDDFKNELQIITDIKNEYCLTCEGIITNYDEVY 119

Query: 123 LVCDYLSQGTLQDAINSYVVIGKS----MEEVLCIYYTIEMLCILESLHDV-GIIHGDFK 177
           ++ +Y+   ++      + V+ K+    +   +       +L     +H+   I H D K
Sbjct: 120 IIYEYMENDSILKFDEYFFVLDKNYTCFIPIQVIKCIIKSVLNSFSYIHNEKNICHRDVK 179

Query: 178 PDNLLI 183
           P N+L+
Sbjct: 180 PSNILM 185

>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ... Length = 284

 Score = 49.9 bits (120), Expect = 4e-07
 Identities = 30/143 (20%), Positives = 55/143 (38%), Gaps = 18/143 (12%)

Query: 49  KYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFPWEFYMYRQLDQRISGRER--- 105
            + I    G+G F  V+ A      + ++ALK+   +   +  +  QL      RE    
Sbjct: 15  DFDIGRPLGKGKFGNVYLA-REKQNKFIMALKVLFKSQLEKEGVEHQLR-----REIEIQ 68

Query: 106 SSFGFAHRIHLY-----SDYSILVCDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEML 160
           S     + + +Y          L+ ++  +G L       +      +E     +  E+ 
Sbjct: 69  SHLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYK----ELQKHGRFDEQRSATFMEELA 124

Query: 161 CILESLHDVGIIHGDFKPDNLLI 183
             L   H+  +IH D KP+NLL+
Sbjct: 125 DALHYCHERKVIHRDIKPENLLM 147

>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A* Length = 303

 Score = 50.0 bits (120), Expect = 4e-07
 Identities = 34/149 (22%), Positives = 56/149 (37%), Gaps = 31/149 (20%)

Query: 48  KKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALK-------------IQKPAFPWEFYMYR 94
           + +      G+G F +VFK   N   + VVA+K             IQ+     E  +  
Sbjct: 22  ELFTKLEKIGKGSFGEVFKGIDNRTQK-VVAIKIIDLEEAEDEIEDIQQ-----EITVLS 75

Query: 95  QLDQRISGRERSSFGFAHRIHLYSDYSILVCDYLSQGTLQDAINSYVVIGKSMEEVLCIY 154
           Q D     +   S+       L      ++ +YL  G+  D     ++    ++E     
Sbjct: 76  QCDSPYVTKYYGSY-------LKDTKLWIIMEYLGGGSALD-----LLEPGPLDETQIAT 123

Query: 155 YTIEMLCILESLHDVGIIHGDFKPDNLLI 183
              E+L  L+ LH    IH D K  N+L+
Sbjct: 124 ILREILKGLDYLHSEKKIHRDIKAANVLL 152

>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ... Length = 320

 Score = 50.0 bits (120), Expect = 4e-07
 Identities = 37/174 (21%), Positives = 72/174 (41%), Gaps = 20/174 (11%)

Query: 32  SSLNNSSRNKTIEIGGKKYQIKGCAGQGGFAKVFKAY--VNGDPEDVVALKI---QKPAF 86
           ++     + K       +YQ+    G GGF  V+      +  P   VA+K     + + 
Sbjct: 29  ATKLAPGKEKEPLES--QYQVGPLLGSGGFGSVYSGIRVSDNLP---VAIKHVEKDRISD 83

Query: 87  PWEFYMYRQLDQRISGRERSSFGFAHRIHLY-----SDYSILVCDYLS-QGTLQDAINSY 140
             E     ++   +   ++ S GF+  I L       D  +L+ +       L D    +
Sbjct: 84  WGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFD----F 139

Query: 141 VVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLD 194
           +    +++E L   +  ++L  +   H+ G++H D K +N+LI   R EL ++D
Sbjct: 140 ITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLID 193

>4apc_A Serine/threonine-protein kinase NEK1; transferase; 2.10A {Homo sapiens} Length = 350

 Score = 50.1 bits (120), Expect = 4e-07
 Identities = 33/164 (20%), Positives = 56/164 (34%), Gaps = 25/164 (15%)

Query: 30  ALSSLNNSSRNKTIEIGGKKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFPW- 88
            +     +   +++E    KY      G+G F K        D    V  +I        
Sbjct: 10  GVDLGTENLYFQSME----KYVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSK 65

Query: 89  -------EFYMYRQLDQR--ISGRERSSFGFAHRIHLYSDYSILVCDYLSQGTLQDAINS 139
                  E  +   +     +  RE     F     LY     +V DY   G L   IN+
Sbjct: 66  EREESRREVAVLANMKHPNIVQYRES----FEENGSLY-----IVMDYCEGGDLFKRINA 116

Query: 140 YVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLI 183
               G   +E   + + +++   L+ +HD  I+H D K  N+ +
Sbjct: 117 QK--GVLFQEDQILDWFVQICLALKHVHDRKILHRDIKSQNIFL 158

>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens} Length = 312

 Score = 50.0 bits (120), Expect = 4e-07
 Identities = 30/173 (17%), Positives = 60/173 (34%), Gaps = 26/173 (15%)

Query: 37  SSRNKTIEIGGKKYQIKGCAGQGGFAKVFKAY--VNGDPEDVVALKIQKPAFPWEFYMYR 94
             +++       +Y++    G+GGF  VF  +   +      VA+K+        +    
Sbjct: 22  GGKDREAFEA--EYRLGPLLGKGGFGTVFAGHRLTDRLQ---VAIKVIPRNRVLGWSPLS 76

Query: 95  QLDQRISGRE-------RSSFGFAHRIHLY-----SDYSILVCDYLSQGT-LQDAINSYV 141
                    E        +  G    I L       +  +LV +       L D    Y+
Sbjct: 77  DS-VTCP-LEVALLWKVGAGGGHPGVIRLLDWFETQEGFMLVLERPLPAQDLFD----YI 130

Query: 142 VIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLD 194
                + E     +  +++  ++  H  G++H D K +N+LI   R    ++D
Sbjct: 131 TEKGPLGEGPSRCFFGQVVAAIQHCHSRGVVHRDIKDENILIDLRRGCAKLID 183

>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A* Length = 322

 Score = 50.0 bits (120), Expect = 4e-07
 Identities = 35/153 (22%), Positives = 59/153 (38%), Gaps = 14/153 (9%)

Query: 48  KKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALK-IQKPAFPWEFYMYRQLDQRISGRERS 106
            +Y +    G G   +V  A         VA+K I K  F             +   E  
Sbjct: 10  DEYIMSKTLGSGACGEVKLA-FERKTCKKVAIKIISKRKFAIGSAREADPALNVE-TEIE 67

Query: 107 ---SFGFAHRIHLYSDYS----ILVCDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEM 159
                     I + + +      +V + +  G L D +    V  K ++E  C  Y  +M
Sbjct: 68  ILKKLNHPCIIKIKNFFDAEDYYIVLELMEGGELFDKV----VGNKRLKEATCKLYFYQM 123

Query: 160 LCILESLHDVGIIHGDFKPDNLLIRYARDELTV 192
           L  ++ LH+ GIIH D KP+N+L+    ++  +
Sbjct: 124 LLAVQYLHENGIIHRDLKPENVLLSSQEEDCLI 156

>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B* Length = 389

 Score = 50.3 bits (120), Expect = 5e-07
 Identities = 27/152 (17%), Positives = 56/152 (36%), Gaps = 31/152 (20%)

Query: 48  KKYQIKGCAGQG--GFAKVFKAYVNGDPEDVVALK--------------IQKPAFPWEFY 91
             Y++    G+G      V  A      E  V ++              +Q      E +
Sbjct: 25  GCYELLTVIGKGFEDLMTVNLARYKPTGE-YVTVRRINLEACSNEMVTFLQG-----ELH 78

Query: 92  MYRQLDQRISGRERSSFGFAHRIHLYSDYSILVCDYLSQGTLQDAINSYVVIGKSMEEVL 151
           + +  +       R++F       L+     +V  +++ G+ +D I ++      M E+ 
Sbjct: 79  VSKLFNHPNIVPYRATF--IADNELW-----VVTSFMAYGSAKDLICTH--FMDGMNELA 129

Query: 152 CIYYTIEMLCILESLHDVGIIHGDFKPDNLLI 183
             Y    +L  L+ +H +G +H   K  ++LI
Sbjct: 130 IAYILQGVLKALDYIHHMGYVHRSVKASHILI 161

>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A Length = 373

 Score = 49.7 bits (119), Expect = 5e-07
 Identities = 36/161 (22%), Positives = 63/161 (39%), Gaps = 21/161 (13%)

Query: 45  IGGKKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQK------PAFPWEFYMYRQLDQ 98
               +Y +    G G F+ V+ A    +   V A+KI +       A   E  + +++  
Sbjct: 16  YKDARYILVRKLGWGHFSTVWLAKDMVNNTHV-AMKIVRGDKVYTEAAEDEIKLLQRV-N 73

Query: 99  RISGRERSSFGFAHRIHLYSDYSI---------LVCDYLSQGTLQDAINSYVVIGKSMEE 149
                +  S G  H + L   ++          +V + L +  L   I  Y   G  +  
Sbjct: 74  DADNTKEDSMGANHILKLLDHFNHKGPNGVHVVMVFEVLGE-NLLALIKKYEHRGIPLIY 132

Query: 150 VLCIYYTIEMLCILESLHD-VGIIHGDFKPDNLLIRYARDE 189
           V  I  + ++L  L+ +H   GIIH D KP+N+L+      
Sbjct: 133 VKQI--SKQLLLGLDYMHRRCGIIHTDIKPENVLMEIVDSP 171

>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7} Length = 360

 Score = 49.6 bits (119), Expect = 6e-07
 Identities = 27/156 (17%), Positives = 57/156 (36%), Gaps = 30/156 (19%)

Query: 44  EIGGKKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKI--QKPAFPWEFYMYRQ------ 95
            +    + +    G G F +V       + +   A+K+      +       R       
Sbjct: 31  MLLNNAFLVIRKMGDGTFGRVLLCQHIDNKK-YYAVKVVRNIKKY------TRSAKIEAD 83

Query: 96  LDQRISGRERSSFG-------FAHRIHLYSDYSILVCDYLSQGTLQDAINSYVVIGKSME 148
           + ++I   + ++         F +  H+      L+ + L   +L + I      G  +E
Sbjct: 84  ILKKIQNDDINNNNIVKYHGKFMYYDHM-----CLIFEPLGP-SLYEIITRNNYNGFHIE 137

Query: 149 EVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIR 184
           ++      IE+L  L  L  + + H D KP+N+L+ 
Sbjct: 138 DIKLY--CIEILKALNYLRKMSLTHTDLKPENILLD 171

>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens} Length = 432

 Score = 49.8 bits (119), Expect = 6e-07
 Identities = 40/249 (16%), Positives = 73/249 (29%), Gaps = 48/249 (19%)

Query: 35  NNSSRNKTIEIGGKKYQIKGCAGQGGFAK-VFKAYVNGDPEDVVALKIQKPAFPWEFYMY 93
           +       + +G   +  K   G G     V++   +      VA+K   P        +
Sbjct: 11  DGDEETSVVIVGKISFCPKDVLGHGAEGTIVYRGMFDNRD---VAVKRILPEC------F 61

Query: 94  RQLDQRISGRE----RSSFGFAHRIHLY-----SDYSILVCDYLSQGTLQDAINSYVVIG 144
              D     RE    R S    + I  +       +  +  +     TLQ+ +       
Sbjct: 62  SFAD-----REVQLLRESDEHPNVIRYFCTEKDRQFQYIAIELC-AATLQEYVEQK---D 112

Query: 145 KSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSGPWQDQ 204
            +   +  I    +    L  LH + I+H D KP N+LI                     
Sbjct: 113 FAHLGLEPITLLQQTTSGLAHLHSLNIVHRDLKPHNILI------------SMPNAHGKI 160

Query: 205 GLCLVDWGRGIDLHLFPDNMEFE---GDCRTSGFR---CIEMQEKKPWKFQVDTYGLCAI 258
              + D+G      L      F    G   T G+     +    K+   + VD +    +
Sbjct: 161 KAMISDFGLCK--KLAVGRHSFSRRSGVPGTEGWIAPEMLSEDCKENPTYTVDIFSAGCV 218

Query: 259 VHMMLHNSY 267
            + ++    
Sbjct: 219 FYYVISEGS 227

>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A* Length = 302

 Score = 49.2 bits (118), Expect = 7e-07
 Identities = 27/148 (18%), Positives = 49/148 (33%), Gaps = 28/148 (18%)

Query: 48  KKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALK------------IQKPAFPWEFYMYRQ 95
           + ++I G  G G F KV+KA        + A K                    E  +   
Sbjct: 19  EVWEIVGELGDGAFGKVYKAKNKETGA-LAAAKVIETKSEEELEDYIV-----EIEILAT 72

Query: 96  LDQRISGRERSSFGFAHRIHLYSDYSILVCDYLSQGTLQDAINSYVVIGKSMEEVLCIYY 155
            D     +   ++        +     ++ ++   G +   +     + + + E      
Sbjct: 73  CDHPYIVKLLGAY-------YHDGKLWIMIEFCPGGAVDAIML---ELDRGLTEPQIQVV 122

Query: 156 TIEMLCILESLHDVGIIHGDFKPDNLLI 183
             +ML  L  LH   IIH D K  N+L+
Sbjct: 123 CRQMLEALNFLHSKRIIHRDLKAGNVLM 150

>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A Length = 419

 Score = 49.7 bits (119), Expect = 7e-07
 Identities = 34/153 (22%), Positives = 59/153 (38%), Gaps = 14/153 (9%)

Query: 48  KKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALK-IQKPAFPWEFYMYRQLDQRISGRERS 106
            +Y +    G G   +V  A         VA++ I K  F             +   E  
Sbjct: 135 DEYIMSKTLGSGACGEVKLA-FERKTCKKVAIRIISKRKFAIGSAREADPALNVE-TEIE 192

Query: 107 ---SFGFAHRIHLYSDYS----ILVCDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEM 159
                     I + + +      +V + +  G L D +    V  K ++E  C  Y  +M
Sbjct: 193 ILKKLNHPCIIKIKNFFDAEDYYIVLELMEGGELFDKV----VGNKRLKEATCKLYFYQM 248

Query: 160 LCILESLHDVGIIHGDFKPDNLLIRYARDELTV 192
           L  ++ LH+ GIIH D KP+N+L+    ++  +
Sbjct: 249 LLAVQYLHENGIIHRDLKPENVLLSSQEEDCLI 281

>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A* Length = 437

 Score = 49.8 bits (119), Expect = 7e-07
 Identities = 33/140 (23%), Positives = 57/140 (40%), Gaps = 27/140 (19%)

Query: 57  GQGGFAKVFKAYVNGDPEDVVALKIQKPAFPWEFYMYRQLDQRISGRERS---------- 106
           G+G F +V       + + V A+KI          M ++ +      ER           
Sbjct: 83  GRGAFGEVAVV-KLKNADKVFAMKILNKW-----EMLKRAETACFREERDVLVNGDSKWI 136

Query: 107 ---SFGFAHRIHLYSDYSILVCDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCIL 163
               + F    +LY     LV DY   G L   ++ +      + E +  +Y  EM+  +
Sbjct: 137 TTLHYAFQDDNNLY-----LVMDYYVGGDLLTLLSKFEDR---LPEEMARFYLAEMVIAI 188

Query: 164 ESLHDVGIIHGDFKPDNLLI 183
           +S+H +  +H D KPDN+L+
Sbjct: 189 DSVHQLHYVHRDIKPDNILM 208

>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens} Length = 314

 Score = 48.9 bits (117), Expect = 1e-06
 Identities = 32/146 (21%), Positives = 56/146 (38%), Gaps = 26/146 (17%)

Query: 48  KKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALK----------IQKPAFPWEFYMYRQLD 97
           + + +    G+G +  V+KA      + +VA+K          I K     E  + +Q D
Sbjct: 29  EVFDVLEKLGEGSYGSVYKAIHKETGQ-IVAIKQVPVESDLQEIIK-----EISIMQQCD 82

Query: 98  QRISGRERSSFGFAHRIHLYSDYSILVCDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTI 157
                +   S+         +    +V +Y   G++ D I    +  K++ E        
Sbjct: 83  SPHVVKYYGSY-------FKNTDLWIVMEYCGAGSVSDIIR---LRNKTLTEDEIATILQ 132

Query: 158 EMLCILESLHDVGIIHGDFKPDNLLI 183
             L  LE LH +  IH D K  N+L+
Sbjct: 133 STLKGLEYLHFMRKIHRDIKAGNILL 158

>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A* Length = 676

 Score = 49.3 bits (117), Expect = 1e-06
 Identities = 35/177 (19%), Positives = 62/177 (35%), Gaps = 39/177 (22%)

Query: 37  SSRNKTIEIGGKKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFPWEFYMYRQL 96
           S    T   G   +++K   G GGF  V +   + D  + VA+K                
Sbjct: 5   SPSLPTQTCG--PWEMKERLGTGGFGYVLRWI-HQDTGEQVAIKQ--------------C 47

Query: 97  DQRISGRERSSF--------GFAHR--IHLY-----------SDYSILVCDYLSQGTLQD 135
            Q +S + R  +           H   +              +D  +L  +Y   G L+ 
Sbjct: 48  RQELSPKNRERWCLEIQIMKKLNHPNVVSAREVPDGLQKLAPNDLPLLAMEYCEGGDLRK 107

Query: 136 AINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTV 192
            +N +      ++E        ++   L  LH+  IIH D KP+N++++     L  
Sbjct: 108 YLNQFENCCG-LKEGPIRTLLSDISSALRYLHENRIIHRDLKPENIVLQPGPQRLIH 163

>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A* Length = 410

 Score = 48.9 bits (117), Expect = 1e-06
 Identities = 35/162 (21%), Positives = 70/162 (43%), Gaps = 29/162 (17%)

Query: 35  NNSSRNKTIEIGGKKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFPWEFYMYR 94
           +  ++ + + +  + Y++    G+G F +V     +     V A+K+          M +
Sbjct: 56  DTINKIRDLRMKAEDYEVVKVIGRGAFGEVQLV-RHKSTRKVYAMKLLSKF-----EMIK 109

Query: 95  QLDQRISGRERS-------------SFGFAHRIHLYSDYSILVCDYLSQGTLQDAINSYV 141
           + D      ER               + F    +LY     +V +Y+  G L + +++Y 
Sbjct: 110 RSDSAFFWEERDIMAFANSPWVVQLFYAFQDDRYLY-----MVMEYMPGGDLVNLMSNY- 163

Query: 142 VIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLI 183
                + E    +YT E++  L+++H +G IH D KPDN+L+
Sbjct: 164 ----DVPEKWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLL 201

>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens} Length = 295

 Score = 48.5 bits (116), Expect = 1e-06
 Identities = 29/136 (21%), Positives = 55/136 (40%), Gaps = 20/136 (14%)

Query: 57  GQGGFAKVFKAYVNGDPEDVVALK-IQKPAFPWEFYMYRQLDQRISGRERSS-------F 108
           G+G +  V+    +   +  +A+K I +          + L + I+  +           
Sbjct: 31  GKGTYGIVYAG-RDLSNQVRIAIKEIPERDSR----YSQPLHEEIALHKHLKHKNIVQYL 85

Query: 109 GF-AHRIHLYSDYSILVCDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLH 167
           G  +    +      +  + +  G+L   + S     K  E+ +  Y T ++L  L+ LH
Sbjct: 86  GSFSENGFIK-----IFMEQVPGGSLSALLRSKWGPLKDNEQTIGFY-TKQILEGLKYLH 139

Query: 168 DVGIIHGDFKPDNLLI 183
           D  I+H D K DN+LI
Sbjct: 140 DNQIVHRDIKGDNVLI 155

>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii} Length = 285

 Score = 47.6 bits (114), Expect = 2e-06
 Identities = 33/163 (20%), Positives = 52/163 (31%), Gaps = 27/163 (16%)

Query: 32  SSLNNSSRNKTIEIGGKKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFPW--- 88
           S   N     TI+     +  K   G G F  V          + V   I K        
Sbjct: 9   SGRENLYFQGTID---DLFIFKRKLGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPME 65

Query: 89  ----EFYMYRQLDQRISGRERSSFGFAHRIHLY-----SDYSILVCDYLSQGTLQDAINS 139
               E  + + LD              + I ++          +V +    G L + I S
Sbjct: 66  QIEAEIEVLKSLDHP------------NIIKIFEVFEDYHNMYIVMETCEGGELLERIVS 113

Query: 140 YVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLL 182
               GK++ E        +M+  L   H   ++H D KP+N+L
Sbjct: 114 AQARGKALSEGYVAELMKQMMNALAYFHSQHVVHKDLKPENIL 156

>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major} Length = 360

 Score = 48.1 bits (115), Expect = 2e-06
 Identities = 32/156 (20%), Positives = 55/156 (35%), Gaps = 34/156 (21%)

Query: 48  KKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFPWEFYMYRQLDQRISGRE--- 104
            ++Q++  AGQG F  V            VA+K  K             D R   RE   
Sbjct: 23  DRFQVERMAGQGTFGTVQLGKEKSTGM-SVAIK--K-VI---------QDPRFRNRELQI 69

Query: 105 -RSSFGFAH------RIHLYSD--------YSILVCDYLSQGTLQDAINSYVVIGKSMEE 149
            +      H      + + Y+         Y  +V +Y+   TL     +Y     +   
Sbjct: 70  MQDLAVLHHPNIVQLQSYFYTLGERDRRDIYLNVVMEYVPD-TLHRCCRNYYRRQVAPPP 128

Query: 150 VLCIYYTIEMLCILESLHDV--GIIHGDFKPDNLLI 183
           +L   +  +++  +  LH     + H D KP N+L+
Sbjct: 129 ILIKVFLFQLIRSIGCLHLPSVNVCHRDIKPHNVLV 164

>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 2qlu_A* Length = 322

 Score = 47.8 bits (114), Expect = 2e-06
 Identities = 35/161 (21%), Positives = 57/161 (35%), Gaps = 33/161 (20%)

Query: 43  IEIGGKKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKI------QKPAFPWEFYMYRQL 96
           +       Q+     +G F  V+KA +  +    VA+KI      Q     +E Y    +
Sbjct: 19  LYFQSMPLQLLEVKARGRFGCVWKAQLLNEY---VAVKIFPIQDKQSWQNEYEVYSLPGM 75

Query: 97  DQR-----ISGRERSSFGFAHRIHLYSDYSILVCDYLSQGTLQDAINSYVVIGKSMEEVL 151
                   I        G   R         L+  +  +G+L D + + VV   S  E+ 
Sbjct: 76  KHENILQFI--------GAEKRGTSVDVDLWLITAFHEKGSLSDFLKANVV---SWNELC 124

Query: 152 CIYYTI--------EMLCILESLHDVGIIHGDFKPDNLLIR 184
            I  T+        E +  L+  H   I H D K  N+L++
Sbjct: 125 HIAETMARGLAYLHEDIPGLKDGHKPAISHRDIKSKNVLLK 165

>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 3fpq_A Length = 290

 Score = 47.3 bits (113), Expect = 3e-06
 Identities = 27/146 (18%), Positives = 53/146 (36%), Gaps = 15/146 (10%)

Query: 47  GKKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFPWEFYMYRQLDQRISGRERS 106
           G+  +     G+G F  V+K        +V   ++Q           ++  +     +  
Sbjct: 25  GRFLKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKS--ERQRFKEEAEMLKGL 82

Query: 107 S-------FGFAHRIHLYSDYSILVCDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEM 159
                   +             +LV + ++ GTL+  +  +    K M+  +   +  ++
Sbjct: 83  QHPNIVRFYDSWESTVKGKKCIVLVTELMTSGTLKTYLKRF----KVMKIKVLRSWCRQI 138

Query: 160 LCILESLHDVG--IIHGDFKPDNLLI 183
           L  L+ LH     IIH D K DN+ I
Sbjct: 139 LKGLQFLHTRTPPIIHRDLKCDNIFI 164

>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3mb7_A* 3mb6_A* 3owj_A* 3owk_A* ... Length = 330

 Score = 47.6 bits (114), Expect = 3e-06
 Identities = 34/154 (22%), Positives = 68/154 (44%), Gaps = 22/154 (14%)

Query: 48  KKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFPWEFYMYRQLDQRISGRERSS 107
             YQ+    G+G +++VF+A  N    + V +KI KP    +     ++ + + G     
Sbjct: 36  DDYQLVRKLGRGKYSEVFEAI-NITNNEKVVVKILKPVKKKKIKREIKILENLRGGP--- 91

Query: 108 FGFAHRIHLY-------SDYSILVCDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEML 160
               + I L        S    LV ++++    +          +++ +    +Y  E+L
Sbjct: 92  ----NIITLADIVKDPVSRTPALVFEHVNNTDFKQLY-------QTLTDYDIRFYMYEIL 140

Query: 161 CILESLHDVGIIHGDFKPDNLLIRYARDELTVLD 194
             L+  H +GI+H D KP N++I +   +L ++D
Sbjct: 141 KALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLID 174

>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A* Length = 382

 Score = 47.4 bits (113), Expect = 3e-06
 Identities = 44/168 (26%), Positives = 67/168 (39%), Gaps = 30/168 (17%)

Query: 44  EIGGKKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFPWEFYMYRQ------LD 97
           E    +Y+I    G+G F +V KAY   + E  VA+KI K     +     Q      L 
Sbjct: 50  EKWMDRYEIDSLIGKGSFGQVVKAYDRVEQE-WVAIKIIKN----KKAFLNQAQIEVRLL 104

Query: 98  QRISGRERSSFG--------FAHRIHLYSDYSILVCDYLSQGTLQDAINSYVVIGKSMEE 149
           + ++  +             F  R HL      LV + LS   L D + +    G S+  
Sbjct: 105 ELMNKHDTEMKYYIVHLKRHFMFRNHLC-----LVFEMLSY-NLYDLLRNTNFRGVSLNL 158

Query: 150 VLCIYYTIEMLCILESLH--DVGIIHGDFKPDN-LLIRYARDELTVLD 194
                +  +M   L  L   ++ IIH D KP+N LL    R  + ++D
Sbjct: 159 TRK--FAQQMCTALLFLATPELSIIHCDLKPENILLCNPKRSAIKIVD 204

>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus} Length = 332

 Score = 47.2 bits (112), Expect = 4e-06
 Identities = 25/173 (14%), Positives = 55/173 (31%), Gaps = 13/173 (7%)

Query: 11  QIMKFEGYHRSNKVYSGKVALSSLNNSSRNKTIEIGGKKYQIKGCAGQGGFAKVFKAYVN 70
           +I          KV     AL+ L +    +      +    K            ++   
Sbjct: 38  RIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLETPPEKWQEEMDEIWLKDESTDW 97

Query: 71  GDPEDVVALKIQKPAFPWEFYMYRQLDQRISGRERSSFGFAHRIHLYSDYSILVCDYLSQ 130
                         A   +         + +  +      + +++LY     +      +
Sbjct: 98  PLSSP-----SPMDAPSVKIRRMDPFSTKNTVGQLQPS--SPKVYLY-----IQMQLCRK 145

Query: 131 GTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLI 183
             L+D +N    + +  E  +C++  I++   +E LH  G++H D KP N+  
Sbjct: 146 ENLKDWMNRRCSL-EDREHGVCLHIFIQIAEAVEFLHSKGLMHRDLKPSNIFF 197

>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A* Length = 297

 Score = 46.9 bits (112), Expect = 4e-06
 Identities = 39/148 (26%), Positives = 54/148 (36%), Gaps = 30/148 (20%)

Query: 48  KKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALK------------IQKPAFPWEFYMYRQ 95
           KKY      GQG    V+ A      +  VA++            I       E  + R+
Sbjct: 20  KKYTRFEKIGQGASGTVYTAMDVATGQ-EVAIRQMNLQQQPKKELIIN-----EILVMRE 73

Query: 96  LDQRISGRERSSFGFAHRIHLYSDYSILVCDYLSQGTLQDAINSYVVIGKSMEEVLCIYY 155
                      S+       L  D   +V +YL+ G+L D     VV    M+E      
Sbjct: 74  NKNPNIVNYLDSY-------LVGDELWVVMEYLAGGSLTD-----VVTETCMDEGQIAAV 121

Query: 156 TIEMLCILESLHDVGIIHGDFKPDNLLI 183
             E L  LE LH   +IH D K DN+L+
Sbjct: 122 CRECLQALEFLHSNQVIHRDIKSDNILL 149

>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} Length = 337

 Score = 47.0 bits (112), Expect = 4e-06
 Identities = 31/161 (19%), Positives = 52/161 (32%), Gaps = 37/161 (22%)

Query: 44  EIGGKKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFPWEFYMYRQLDQRISGR 103
               K+ Q+    G+G + +V+     G+    VA+K+    F          +  I   
Sbjct: 33  RTIAKQIQMVKQIGKGRYGEVWMGKWRGEK---VAVKV----FFTTEEASWFRETEIYQT 85

Query: 104 ER------------SSFGFAHRIHLYSDYSILVCDYLSQGTLQDAINSYVVIGKSMEEVL 151
                            G      LY     L+ DY   G+L D + S  +     + +L
Sbjct: 86  VLMRHENILGFIAADIKGTGSWTQLY-----LITDYHENGSLYDYLKSTTL---DAKSML 137

Query: 152 CIYYTIEMLCILESLHD--------VGIIHGDFKPDNLLIR 184
            +      +  L  LH           I H D K  N+L++
Sbjct: 138 KL--AYSSVSGLCHLHTEIFSTQGKPAIAHRDLKSKNILVK 176

>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp} Length = 294

 Score = 46.5 bits (111), Expect = 5e-06
 Identities = 36/153 (23%), Positives = 64/153 (41%), Gaps = 34/153 (22%)

Query: 47  GKKYQIKGCAGQGGFAKVFKAYVNGDPED-----VVALKIQKPAFPWEFYMYRQLDQRIS 101
            ++Y+I    G GG + V+ A       D      VA+K              +  +   
Sbjct: 10  NERYKIVDKLGGGGMSTVYLAE------DTILNIKVAIKAIFIPP--------REKEETL 55

Query: 102 GR---E-RSSFGFAHR--IHLY-----SDYSILVCDYLSQGTLQDAINSYVVIGKSMEEV 150
            R   E  +S   +H+  + +       D   LV +Y+   TL + I S+  +  S++  
Sbjct: 56  KRFEREVHNSSQLSHQNIVSMIDVDEEDDCYYLVMEYIEGPTLSEYIESHGPL--SVDTA 113

Query: 151 LCIYYTIEMLCILESLHDVGIIHGDFKPDNLLI 183
           +    T ++L  ++  HD+ I+H D KP N+LI
Sbjct: 114 INF--TNQILDGIKHAHDMRIVHRDIKPQNILI 144

>1uu3_A HPDK1, 3-phosphoinositide dependent protein kinase-1; PKB, inhibitor, LY333531, diabetes, cancer, transferase, serine/threonine-protein kinase; HET: SEP LY4; 1.7A {Homo sapiens} SCOP: d.144.1.7 PDB: 1okz_A* 1oky_A* 1uu7_A* 1uu8_A* 2biy_A* 3rwp_A* 2xch_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* ... Length = 310

 Score = 46.5 bits (111), Expect = 6e-06
 Identities = 24/69 (34%), Positives = 30/69 (43%), Gaps = 9/69 (13%)

Query: 115 HLYSDYSILVCDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHG 174
            LY         Y   G L   I      G   E     +YT E++  LE LH  GIIH 
Sbjct: 104 KLY-----FGLSYAKNGELLKYIRKI---GSFDETCTR-FYTAEIVSALEYLHGKGIIHR 154

Query: 175 DFKPDNLLI 183
           D KP+N+L+
Sbjct: 155 DLKPENILL 163

>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A* Length = 279

 Score = 46.1 bits (110), Expect = 6e-06
 Identities = 24/151 (15%), Positives = 51/151 (33%), Gaps = 22/151 (14%)

Query: 48  KKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFPW--------EFYMYRQLDQR 99
           + Y++    G G + +  K     D + +V  ++   +           E  + R+L   
Sbjct: 6   EDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHP 65

Query: 100 --ISGRERSSFGFAHRIHLYSDYSILVCDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTI 157
             +   +           LY     +V +Y   G L   I       + ++E   +    
Sbjct: 66  NIVRYYD--RIIDRTNTTLY-----IVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMT 118

Query: 158 EMLCILESLHDVG-----IIHGDFKPDNLLI 183
           ++   L+  H        ++H D KP N+ +
Sbjct: 119 QLTLALKECHRRSDGGHTVLHRDLKPANVFL 149

>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A* Length = 434

 Score = 46.3 bits (110), Expect = 8e-06
 Identities = 43/244 (17%), Positives = 75/244 (30%), Gaps = 37/244 (15%)

Query: 44  EIGGKKYQIKGCAGQGGFAKVFKAYV-NGDPEDVVALKIQKPAFPWEFYMYRQLDQRISG 102
           +        +   G G    V       G P   VA+K     F             I  
Sbjct: 11  QSLKNLVVSEKILGYGSSGTVVFQGSFQGRP---VAVKRMLIDF------CDIALMEIKL 61

Query: 103 RERSSFGFAHR--IHLY-----SDYSILVCDYLSQGTLQDAI---NSYVVIGKSMEEVLC 152
              S     H   I  Y       +  +  +      LQD +   N      K  +E   
Sbjct: 62  LTESD---DHPNVIRYYCSETTDRFLYIALELC-NLNLQDLVESKNVSDENLKLQKEYNP 117

Query: 153 IYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSGPWQDQGLCLVDWG 212
           I    ++   +  LH + IIH D KP N+L+       +    D+    ++  + + D+G
Sbjct: 118 ISLLRQIASGVAHLHSLKIIHRDLKPQNILV----STSSRFTADQQTGAENLRILISDFG 173

Query: 213 --RGIDLHLFPDNMEFEGDCRTSGFR-------CIEMQEKKPWKFQVDTYGLCAIVHMML 263
             + +D               TSG+R          +Q K+     +D + +  + + +L
Sbjct: 174 LCKKLDSGQSSFRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYIL 233

Query: 264 HNSY 267
               
Sbjct: 234 SKGK 237

>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A* Length = 348

 Score = 45.9 bits (109), Expect = 1e-05
 Identities = 36/146 (24%), Positives = 56/146 (38%), Gaps = 22/146 (15%)

Query: 48  KKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKI-----QKPAFPW-----EFYMYRQLD 97
           K +      G G F  V+ A    + E VVA+K      ++    W     E    ++L 
Sbjct: 54  KLFSDLREIGHGSFGAVYFARDVRNSE-VVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLR 112

Query: 98  QRISGRERSSFGFAHRIHLYSDYSILVCDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTI 157
              + + R  +       L    + LV +Y   G+  D +    V  K ++EV     T 
Sbjct: 113 HPNTIQYRGCY-------LREHTAWLVMEYCL-GSASDLLE---VHKKPLQEVEIAAVTH 161

Query: 158 EMLCILESLHDVGIIHGDFKPDNLLI 183
             L  L  LH   +IH D K  N+L+
Sbjct: 162 GALQGLAYLHSHNMIHRDVKAGNILL 187

>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B Length = 543

 Score = 45.9 bits (109), Expect = 1e-05
 Identities = 20/69 (28%), Positives = 34/69 (49%), Gaps = 5/69 (7%)

Query: 115 HLYSDYSILVCDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHG 174
            L      LV   ++ G ++  I +        +E   I+YT +++  LE LH   II+ 
Sbjct: 259 DLC-----LVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQRNIIYR 313

Query: 175 DFKPDNLLI 183
           D KP+N+L+
Sbjct: 314 DLKPENVLL 322

>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens} Length = 307

 Score = 45.4 bits (108), Expect = 1e-05
 Identities = 32/158 (20%), Positives = 57/158 (36%), Gaps = 41/158 (25%)

Query: 44  EIGGKKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKI-----QKPAFPWEFYMYRQLDQ 98
            I  K+ +++   G+G F  V KA         VA+K      ++ AF  E     +++ 
Sbjct: 4   MIDYKEIEVEEVVGRGAFGVVCKAKWRAKD---VAIKQIESESERKAFIVELRQLSRVN- 59

Query: 99  RISGRERSSFGFAHR--IHLY----SDYSILVCDYLSQGTLQDAINSYVVIGK-SMEEVL 151
                        H   + LY    +   + V +Y   G+L + ++    +   +    +
Sbjct: 60  -------------HPNIVKLYGACLNPVCL-VMEYAEGGSLYNVLHGAEPLPYYTAAHAM 105

Query: 152 CIYYTIEMLCI------LESLHDVGIIHGDFKPDNLLI 183
                   L        L S+    +IH D KP NLL+
Sbjct: 106 SW-----CLQCSQGVAYLHSMQPKALIHRDLKPPNLLL 138

>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A* Length = 276

 Score = 44.5 bits (106), Expect = 2e-05
 Identities = 38/156 (24%), Positives = 62/156 (39%), Gaps = 22/156 (14%)

Query: 37  SSRNKTIEIGGKKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKI-QKPAFPWEFYMYRQ 95
           S  +  ++IG   Y +    G G F KV     +      VA+KI  +            
Sbjct: 2   SKHDGRVKIG--HYVLGDTLGVGTFGKVKIG-EHQLTGHKVAVKILNRQKI-----RSLD 53

Query: 96  LDQRISGRERS---SFGFAHRIHLY-----SDYSILVCDYLSQGTLQDAINSYVVIGKSM 147
           +  +I  RE      F   H I LY          +V +Y+S G L D    Y+     +
Sbjct: 54  VVGKIK-REIQNLKLFRHPHIIKLYQVISTPTDFFMVMEYVSGGELFD----YICKHGRV 108

Query: 148 EEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLI 183
           EE+       ++L  ++  H   ++H D KP+N+L+
Sbjct: 109 EEMEARRLFQQILSAVDYCHRHMVVHRDLKPENVLL 144

>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens} Length = 335

 Score = 44.7 bits (106), Expect = 2e-05
 Identities = 31/162 (19%), Positives = 59/162 (36%), Gaps = 18/162 (11%)

Query: 32  SSLNNSSRNKTIEIGGKKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALK-IQKPAFPWEF 90
             L   +  +       KY      G G F  V+ A      ++V  +K I+K     + 
Sbjct: 10  VELEGLAACEGEYSQ--KYSTMSPLGSGAFGFVWTAVDKEKNKEV-VVKFIKKEKVLEDC 66

Query: 91  YMYRQLDQRISGRE---RSSFGFAHRIHLY-----SDYSILVCDYLSQGT-LQDAINSYV 141
           ++      +++  E    S    A+ I +        +  LV +    G  L      ++
Sbjct: 67  WIEDPKLGKVT-LEIAILSRVEHANIIKVLDIFENQGFFQLVMEKHGSGLDLFA----FI 121

Query: 142 VIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLI 183
                ++E L  Y   +++  +  L    IIH D K +N++I
Sbjct: 122 DRHPRLDEPLASYIFRQLVSAVGYLRLKDIIHRDIKDENIVI 163

>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A* Length = 327

 Score = 44.8 bits (107), Expect = 2e-05
 Identities = 38/147 (25%), Positives = 58/147 (39%), Gaps = 38/147 (25%)

Query: 57  GQGGFAKVF--KAYVNGDPEDVVALKIQKPAFPWEFYMYRQLDQ--------RISGRERS 106
           G+GG+ KVF  +     +   + A+K+ K A      + R             I    + 
Sbjct: 26  GKGGYGKVFQVRKVTGANTGKIFAMKVLKKAM-----IVRNAKDTAHTKAERNILEEVKH 80

Query: 107 SF------GFAHRIHLYSDYSILVCDYLSQGTL----QDAINSYVVIGKSMEEVLCIYYT 156
            F       F     LY     L+ +YLS G L    +         G  ME+  C +Y 
Sbjct: 81  PFIVDLIYAFQTGGKLY-----LILEYLSGGELFMQLERE-------GIFMEDTAC-FYL 127

Query: 157 IEMLCILESLHDVGIIHGDFKPDNLLI 183
            E+   L  LH  GII+ D KP+N+++
Sbjct: 128 AEISMALGHLHQKGIIYRDLKPENIML 154

>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A* Length = 321

 Score = 44.7 bits (106), Expect = 2e-05
 Identities = 28/143 (19%), Positives = 47/143 (32%), Gaps = 20/143 (13%)

Query: 48  KKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKI-------QKPAFPWEFYMYRQLDQRI 100
                    G+G    V  A         VA+K+       ++     E  + R      
Sbjct: 45  LLLDSYVKIGEGSTGIVCLAREKHSGR-QVAVKMMDLRKQQRRELLFNEVVIMRDYQHFN 103

Query: 101 SGRERSSFGFAHRIHLYSDYSILVCDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEML 160
                 S+       L  +   ++ ++L  G L D     +V    + E         +L
Sbjct: 104 VVEMYKSY-------LVGEELWVLMEFLQGGALTD-----IVSQVRLNEEQIATVCEAVL 151

Query: 161 CILESLHDVGIIHGDFKPDNLLI 183
             L  LH  G+IH D K D++L+
Sbjct: 152 QALAYLHAQGVIHRDIKSDSILL 174

>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A* Length = 342

 Score = 44.8 bits (106), Expect = 2e-05
 Identities = 29/155 (18%), Positives = 56/155 (36%), Gaps = 23/155 (14%)

Query: 44  EIGGKKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFPWEFYMYRQLDQRISGR 103
               +   ++   G+G F +V++    G+    VA+KI    F          +  I   
Sbjct: 38  RTIARTIVLQESIGKGRFGEVWRGKWRGEE---VAVKI----FSSREERSWFREAEIYQT 90

Query: 104 ERSS-------FGFAHRIHLYSDYSILVCDYLSQGTLQDAINSYVVIGKSMEEVLCIYYT 156
                          ++ +       LV DY   G+L D +N Y V   ++E ++ +  +
Sbjct: 91  VMLRHENILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTV---TVEGMIKLALS 147

Query: 157 IE--MLC----ILESLHDVGIIHGDFKPDNLLIRY 185
               +      I+ +     I H D K  N+L++ 
Sbjct: 148 TASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKK 182

>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis} Length = 309

 Score = 44.2 bits (105), Expect = 3e-05
 Identities = 33/152 (21%), Positives = 58/152 (38%), Gaps = 38/152 (25%)

Query: 50  YQIKGCAGQGGFAKVFKAYVNGDP--EDVVALKIQKPAF---PWEFYMYRQLDQRISGRE 104
           Y+++   G+GG   V++A    D   E +VALK+        P  F        R+  RE
Sbjct: 36  YRLRRLVGRGGMGDVYEAE---DTVRERIVALKLMSETLSSDP-VFR------TRMQ-RE 84

Query: 105 -RSSFGFAH----RIH--------LYSDYSILVCDYLSQGTLQDAINSYVVIGKSMEEVL 151
            R++          IH        LY     +    ++   L   +     +  +    +
Sbjct: 85  ARTAGRLQEPHVVPIHDFGEIDGQLY-----VDMRLINGVDLAAMLRRQGPL--APPRAV 137

Query: 152 CIYYTIEMLCILESLHDVGIIHGDFKPDNLLI 183
            I    ++   L++ H  G  H D KP+N+L+
Sbjct: 138 AI--VRQIGSALDAAHAAGATHRDVKPENILV 167

>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A* Length = 311

 Score = 44.2 bits (105), Expect = 3e-05
 Identities = 34/159 (21%), Positives = 61/159 (38%), Gaps = 48/159 (30%)

Query: 50  YQIKGCAGQGGFAKVFKAYVNGDPEDV-----VALKIQKPAF---PWEFYM-YRQ----- 95
           Y++    G GG ++V  A       D+     VA+K+ +      P  FY+ +R+     
Sbjct: 14  YELGEILGFGGMSEVHLAR------DLRDHRDVAVKVLRADLARDP-SFYLRFRREAQNA 66

Query: 96  -----------LDQRISGRERSSFGFAHRIHLYSDYSILVCDYLSQGTLQDAINSYVVIG 144
                       D    G   +  G          Y  +V +Y+   TL+D +++   + 
Sbjct: 67  AALNHPAIVAVYDT---GEAETPAGPLP-------Y--IVMEYVDGVTLRDIVHTEGPM- 113

Query: 145 KSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLI 183
            + +  + +    +    L   H  GIIH D KP N++I
Sbjct: 114 -TPKRAIEV--IADACQALNFSHQNGIIHRDVKPANIMI 149

>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ... Length = 350

 Score = 43.8 bits (104), Expect = 5e-05
 Identities = 37/186 (19%), Positives = 64/186 (34%), Gaps = 24/186 (12%)

Query: 9   NSQIMKFEGYHRSNKVYSGKVALSSLNNSSRNKTIEIGGKKYQIKGCAGQGGFAKVFKAY 68
           N+   K      S K +  K     L              ++      G G F +V    
Sbjct: 2   NAAAAKKGSEQESVKEFLAKAKEDFLKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVK 61

Query: 69  VNGDPEDVVALKIQKPAFPWEFYMYRQLD-----QRISGRERSSF------GFAHRIHLY 117
                    A+KI       +    +Q++     +RI       F       F    +LY
Sbjct: 62  HKESGN-HYAMKILDKQ---KVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLY 117

Query: 118 SDYSILVCDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFK 177
                +V +Y++ G +     S++       E    +Y  +++   E LH + +I+ D K
Sbjct: 118 -----MVMEYVAGGEMF----SHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLK 168

Query: 178 PDNLLI 183
           P+NLLI
Sbjct: 169 PENLLI 174

>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A* Length = 576

 Score = 44.0 bits (104), Expect = 5e-05
 Identities = 32/141 (22%), Positives = 55/141 (39%), Gaps = 28/141 (19%)

Query: 57  GQGGFAKVFKAYVNGDPEDVVALKIQKPAFPWEFYMYRQLDQ--------RISGRERSSF 108
           G+GGF +V    V    + + A K  +          ++           +I  +  S F
Sbjct: 193 GKGGFGEVCACQVRATGK-MYACKKLEKK------RIKKRKGEAMALNEKQILEKVNSRF 245

Query: 109 ------GFAHRIHLYSDYSILVCDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCI 162
                  +  +  L      LV   ++ G L+  I  Y +      E   ++Y  E+ C 
Sbjct: 246 VVSLAYAYETKDALC-----LVLTLMNGGDLKFHI--YHMGQAGFPEARAVFYAAEICCG 298

Query: 163 LESLHDVGIIHGDFKPDNLLI 183
           LE LH   I++ D KP+N+L+
Sbjct: 299 LEDLHRERIVYRDLKPENILL 319

>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A* Length = 301

 Score = 43.1 bits (102), Expect = 6e-05
 Identities = 26/147 (17%), Positives = 46/147 (31%), Gaps = 23/147 (15%)

Query: 51  QIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFPWEFYMYRQLDQRISGRERSS--- 107
            +  C G+G + +V++    G+    VA+KI    F          +  +          
Sbjct: 11  TLLECVGKGRYGEVWRGSWQGEN---VAVKI----FSSRDEKSWFRETELYNTVMLRHEN 63

Query: 108 ----FGFAHRIHLYSDYSILVCDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIE--MLC 161
                         S    L+  Y   G+L D +    +        L I  +I   +  
Sbjct: 64  ILGFIASDMTSRHSSTQLWLITHYHEMGSLYDYLQLTTL---DTVSCLRIVLSIASGLAH 120

Query: 162 ----ILESLHDVGIIHGDFKPDNLLIR 184
               I  +     I H D K  N+L++
Sbjct: 121 LHIEIFGTQGKPAIAHRDLKSKNILVK 147

>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A Length = 328

 Score = 43.1 bits (102), Expect = 7e-05
 Identities = 39/160 (24%), Positives = 65/160 (40%), Gaps = 31/160 (19%)

Query: 37  SSRNKTIEIGGKKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKI-QKPAFPWEFYMYRQ 95
           S  ++   IG   Y++    G+G FAKV  A  +      VA+KI  K           Q
Sbjct: 6   SCADEQPHIG--NYRLLKTIGKGNFAKVKLA-RHILTGREVAIKIIDK----------TQ 52

Query: 96  LD----QRISGRERS---SFGFAHRIHLY-----SDYSILVCDYLSQGTLQDAINSYVVI 143
           L+    Q++  RE          + + L+          L+ +Y S G + D    Y+V 
Sbjct: 53  LNPTSLQKLF-REVRIMKILNHPNIVKLFEVIETEKTLYLIMEYASGGEVFD----YLVA 107

Query: 144 GKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLI 183
              M+E        +++  ++  H   I+H D K +NLL+
Sbjct: 108 HGRMKEKEARSKFRQIVSAVQYCHQKRIVHRDLKAENLLL 147

>1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP, manganese, transferase; HET: ADP; 1.89A {Archaeoglobus fulgidus} PDB: 1zp9_A* 1ztf_A* Length = 258

 Score = 42.7 bits (100), Expect = 8e-05
 Identities = 42/264 (15%), Positives = 76/264 (28%), Gaps = 64/264 (24%)

Query: 1   MNKLLKQINSQIMKFEGYHRSNKVYSG---------KVALSSLNNSSRNKTIEIGGKKYQ 51
           M  L K+I S + K     +  +                L  L+           G    
Sbjct: 1   MKDL-KKIESYLDKLRIKEKDGEERKIYAEVLDGRTLKTLYKLSAK---------GYITA 50

Query: 52  IKGCAGQGGFAKVFKAYVNGDPEDV-VALKIQKPAFPWEFYM--YRQLDQRISGRERSS- 107
           + G    G  A VF A    D + V +A+KI +        M  Y   D+R   R  S  
Sbjct: 51  MGGVISTGKEANVFYADGVFDGKPVAMAVKIYRIETSEFDKMDEYLYGDERFDMRRISPK 110

Query: 108 ----------FGFAHRIH---------LYSDYSILVCDYLSQGTLQDAINSYVVIGKSME 148
                     F    R                ++L+ +++ +  L       +       
Sbjct: 111 EKVFIWTEKEFRNLERAKEAGVSVPQPYTYMKNVLLMEFIGEDELPAPTLVELGRELKEL 170

Query: 149 EVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSGPWQDQGLCL 208
           +V  I+  + +  +     +  ++H D    N++                       +  
Sbjct: 171 DVEGIFNDV-VENVKRLYQEAELVHADLSEYNIMY-------------------IDKVYF 210

Query: 209 VDWGRGIDLHLFPDNMEF-EGDCR 231
           +D G+ + L   P    + E D R
Sbjct: 211 IDMGQAVTLR-HPMAESYLERDVR 233

>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A Length = 351

 Score = 43.1 bits (102), Expect = 9e-05
 Identities = 34/144 (23%), Positives = 53/144 (36%), Gaps = 14/144 (9%)

Query: 48  KKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALK-IQKPAFPWEFYMYRQLDQRISGRERS 106
             Y++    G+G F+ V +  +N +     A+K +    F         L      RE S
Sbjct: 24  DVYELCEVIGKGPFSVVRRC-INRETGQQFAVKIVDVAKFTSS----PGLSTEDLKREAS 78

Query: 107 ---SFGFAHRIHLYSDYS-----ILVCDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIE 158
                   H + L   YS      +V +++    L   I      G    E +  +Y  +
Sbjct: 79  ICHMLKHPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQ 138

Query: 159 MLCILESLHDVGIIHGDFKPDNLL 182
           +L  L   HD  IIH D KP  +L
Sbjct: 139 ILEALRYCHDNNIIHRDVKPHCVL 162

>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens} Length = 310

 Score = 42.7 bits (101), Expect = 9e-05
 Identities = 29/146 (19%), Positives = 48/146 (32%), Gaps = 40/146 (27%)

Query: 57  GQGGFAKVFKAYVNGDPEDVVALKIQKP------AFPWEFYMYRQLDQRISGRERSSFGF 110
           G+G F +  K       E +V  ++ +        F  E  + R L+             
Sbjct: 19  GKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLE------------- 65

Query: 111 AHR--IHLY------SDYSILVCDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLC- 161
            H   +            +  + +Y+  GTL+  I       KSM+        +     
Sbjct: 66  -HPNVLKFIGVLYKDKRLNF-ITEYIKGGTLRGII-------KSMDSQYPWSQRVSFAKD 116

Query: 162 I---LESLHDVGIIHGDFKPDNLLIR 184
           I   +  LH + IIH D    N L+R
Sbjct: 117 IASGMAYLHSMNIIHRDLNSHNCLVR 142

>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens} Length = 384

 Score = 42.7 bits (101), Expect = 1e-04
 Identities = 12/30 (40%), Positives = 19/30 (63%)

Query: 154 YYTIEMLCILESLHDVGIIHGDFKPDNLLI 183
            +  E++  L+ L +  IIH D KPDN+L+
Sbjct: 119 LFICELVMALDYLQNQRIIHRDMKPDNILL 148

>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A* Length = 353

 Score = 42.6 bits (101), Expect = 1e-04
 Identities = 20/73 (27%), Positives = 30/73 (41%), Gaps = 17/73 (23%)

Query: 115 HLYSDYSILVCDYLSQGTL----QDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVG 170
            LY      V +Y++ G L    Q         G+  E     +Y  E+   L  L   G
Sbjct: 95  RLY-----FVMEYVNGGDLMYHIQQV-------GRFKEPHAV-FYAAEIAIGLFFLQSKG 141

Query: 171 IIHGDFKPDNLLI 183
           II+ D K DN+++
Sbjct: 142 IIYRDLKLDNVML 154

>3g51_A Ribosomal protein S6 kinase alpha-3; N-terminal kinase domain of P90 ribosomal S6 kinase 2, ATP- binding, nucleotide-binding, phosphoprotein; HET: ANP; 1.80A {Mus musculus} PDB: 2z7q_A* 2z7r_A* 2z7s_A* Length = 325

 Score = 42.5 bits (101), Expect = 1e-04
 Identities = 39/146 (26%), Positives = 57/146 (39%), Gaps = 38/146 (26%)

Query: 57  GQGGFAKVF--KAYVNGDPEDVVALKIQKPAFPWEFYMYRQLDQRISGRERS-------- 106
           GQG F KVF  K     D   + A+K+ K A        +  D+  +  ER         
Sbjct: 33  GQGSFGKVFLVKKISGSDARQLYAMKVLKKA------TLKVRDRVRTKMERDILVEVNHP 86

Query: 107 -----SFGFAHRIHLYSDYSILVCDYLSQGTL----QDAINSYVVIGKSMEEVLCIYYTI 157
                 + F     LY     L+ D+L  G L                  EE +  +Y  
Sbjct: 87  FIVKLHYAFQTEGKLY-----LILDFLRGGDLFTRLSKE-------VMFTEEDVK-FYLA 133

Query: 158 EMLCILESLHDVGIIHGDFKPDNLLI 183
           E+   L+ LH +GII+ D KP+N+L+
Sbjct: 134 ELALALDHLHSLGIIYRDLKPENILL 159

>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens} Length = 319

 Score = 42.3 bits (100), Expect = 1e-04
 Identities = 31/157 (19%), Positives = 51/157 (32%), Gaps = 51/157 (32%)

Query: 57  GQGGFAKVFKAYVNGDPEDVVALKIQKP---------AFPWEFYMYRQLDQRISGRERSS 107
           G+G F +V+    +G+    VA+++            AF  E   YRQ            
Sbjct: 42  GKGRFGQVYHGRWHGE----VAIRLIDIERDNEDQLKAFKREVMAYRQTR---------- 87

Query: 108 FGFAHR--IHLY------SDYSILVCDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEM 159
               H   +            +I +       TL   +       +  + VL +  T ++
Sbjct: 88  ----HENVVLFMGACMSPPHLAI-ITSLCKGRTLYSVV-------RDAKIVLDVNKTRQI 135

Query: 160 LC-I---LESLHDVGIIHGDFKPDNLLIRYARDELTV 192
              I   +  LH  GI+H D K  N+      D   V
Sbjct: 136 AQEIVKGMGYLHAKGILHKDLKSKNVFY----DNGKV 168

>1nd4_A Aminoglycoside 3'-phosphotransferase; protein kinase, ATPase, kanamycin; HET: KAN; 2.10A {Klebsiella pneumoniae} SCOP: d.144.1.6 Length = 264

 Score = 42.3 bits (99), Expect = 1e-04
 Identities = 12/54 (22%), Positives = 21/54 (38%), Gaps = 6/54 (11%)

Query: 167 HDVGIIHGDFKPDNLLIRYARDELT-VLDHDRSG---PWQDQGLCLVDWGRGID 216
            D+ + HGD    N+++       +  +D  R G    +QD  L   D    + 
Sbjct: 182 EDLVVTHGDACLPNIMVE--NGRFSGFIDCGRLGVADRYQDIALATRDIAEELG 233

>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7 Length = 355

 Score = 42.7 bits (101), Expect = 1e-04
 Identities = 33/148 (22%), Positives = 55/148 (37%), Gaps = 39/148 (26%)

Query: 57  GQGGFAKVF--KAYVNGDPEDVVALKIQKPAFPWEFYMYRQLDQRISGR-ERSSFGFAHR 113
           G G + KVF  +     D   + A+K+ K A      + ++       R ER       +
Sbjct: 63  GTGAYGKVFLVRKISGHDTGKLYAMKVLKKAT-----IVQKAKTTEHTRTERQVLEHIRQ 117

Query: 114 I--------------HLYSDYSILVCDYLSQGTL----QDAINSYVVIGKSMEEVLCIYY 155
                           L+     L+ DY++ G L               +  E  +   Y
Sbjct: 118 SPFLVTLHYAFQTETKLH-----LILDYINGGELFTHLSQR-------ERFTEHEVQ-IY 164

Query: 156 TIEMLCILESLHDVGIIHGDFKPDNLLI 183
             E++  LE LH +GII+ D K +N+L+
Sbjct: 165 VGEIVLALEHLHKLGIIYRDIKLENILL 192

>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7 Length = 318

 Score = 42.1 bits (100), Expect = 1e-04
 Identities = 13/30 (43%), Positives = 19/30 (63%)

Query: 154 YYTIEMLCILESLHDVGIIHGDFKPDNLLI 183
           +Y  E+   LE LH   II+ D KP+N+L+
Sbjct: 110 FYAAEVCLALEYLHSKDIIYRDLKPENILL 139

>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens} Length = 336

 Score = 42.5 bits (100), Expect = 1e-04
 Identities = 26/172 (15%), Positives = 55/172 (31%), Gaps = 55/172 (31%)

Query: 44  EIGGKKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFPW----------EFYMY 93
            +     ++    G+G +  V+K  ++  P   VA+K+    F +            Y  
Sbjct: 9   SLDLDNLKLLELIGRGRYGAVYKGSLDERP---VAVKV----FSFANRQNFINEKNIYRV 61

Query: 94  RQL-----------DQRISGRERSSFGFAHRIHLYSDYSILVCDYLSQGTLQDAINSYVV 142
             +           D+R++   R  +             +LV +Y   G+L   ++ +  
Sbjct: 62  PLMEHDNIARFIVGDERVTADGRMEY-------------LLVMEYYPNGSLXKYLSLHTS 108

Query: 143 IGKSMEEVLCIYYTIEMLCILESLHDV---------GIIHGDFKPDNLLIRY 185
                     + +++     L  LH            I H D    N+L++ 
Sbjct: 109 ---DWVSSCRLAHSV--TRGLAYLHTELPRGDHYKPAISHRDLNSRNVLVKN 155

>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A* Length = 486

 Score = 42.7 bits (101), Expect = 1e-04
 Identities = 34/165 (20%), Positives = 58/165 (35%), Gaps = 34/165 (20%)

Query: 32  SSLNNSSRNKTIEIGGKKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALK-IQKPAFPW-- 88
           S   N     T     ++Y I    G+G F +V K   +   +   A+K I K +     
Sbjct: 9   SGRENLYFQGTFA---ERYNIVCMLGKGSFGEVLKC-KDRITQQEYAVKVINKASAKNKD 64

Query: 89  ------EFYMYRQLDQRISGRERSSFGFAHRIHLY-----SDYSILVCDYLSQGTLQDAI 137
                 E  + ++LD              + + L+     S    +V +  + G L D I
Sbjct: 65  TSTILREVELLKKLDHP------------NIMKLFEILEDSSSFYIVGELYTGGELFDEI 112

Query: 138 NSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLL 182
                  K   E        ++   +  +H   I+H D KP+N+L
Sbjct: 113 IKR----KRFSEHDAARIIKQVFSGITYMHKHNIVHRDLKPENIL 153

>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A* Length = 298

 Score = 42.2 bits (100), Expect = 1e-04
 Identities = 31/145 (21%), Positives = 58/145 (40%), Gaps = 15/145 (10%)

Query: 48  KKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALK-IQKPAFPWEFYMYRQLDQRISGRE-- 104
           + Y+ K   G+G  + V +  ++       A+K I             Q  +  + +E  
Sbjct: 17  ENYEPKEILGRGVSSVVRRC-IHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVD 75

Query: 105 --RSSFGFAHRIHLY-----SDYSILVCDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTI 157
             R   G  + I L      + +  LV D + +G L D +        ++ E        
Sbjct: 76  ILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEK----VTLSEKETRKIMR 131

Query: 158 EMLCILESLHDVGIIHGDFKPDNLL 182
            +L ++ +LH + I+H D KP+N+L
Sbjct: 132 ALLEVICALHKLNIVHRDLKPENIL 156

>3pvu_A Beta-adrenergic receptor kinase 1; transferase, serine/threonine-protein kinase, ATP-binding, I membrane; HET: QRW; 2.48A {Bos taurus} PDB: 3psc_A* 3pvw_A* 1omw_A 1ym7_A 2bcj_A* 3cik_A 3krw_A* 3krx_A* 1bak_A Length = 695

 Score = 42.6 bits (100), Expect = 1e-04
 Identities = 16/69 (23%), Positives = 32/69 (46%), Gaps = 9/69 (13%)

Query: 115 HLYSDYSILVCDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHG 174
            L       + D ++ G L   ++ + V      E    +Y  E++  LE +H+  +++ 
Sbjct: 266 KLS-----FILDLMNGGDLHYHLSQHGVF----SEADMRFYAAEIILGLEHMHNRFVVYR 316

Query: 175 DFKPDNLLI 183
           D KP N+L+
Sbjct: 317 DLKPANILL 325

>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A* Length = 484

 Score = 42.4 bits (100), Expect = 2e-04
 Identities = 36/160 (22%), Positives = 58/160 (36%), Gaps = 32/160 (20%)

Query: 48  KKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALK-IQKPAFPW---------EFYMYRQLD 97
            +Y+ +   G+G F +V     +       A+K I K              E  + +QLD
Sbjct: 26  DRYKGQRVLGKGSFGEVILC-KDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLD 84

Query: 98  QRISGRERSSFGFAHRIHLY-----SDYSILVCDYLSQGTLQDAINSYVVIGKSMEEVLC 152
                         + + LY       Y  LV +  + G L D I S     K   EV  
Sbjct: 85  HP------------NIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISR----KRFSEVDA 128

Query: 153 IYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTV 192
                ++L  +  +H   I+H D KP+NLL+     +  +
Sbjct: 129 ARIIRQVLSGITYMHKNKIVHRDLKPENLLLESKSKDANI 168

>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A* Length = 494

 Score = 42.4 bits (100), Expect = 2e-04
 Identities = 33/159 (20%), Positives = 53/159 (33%), Gaps = 31/159 (19%)

Query: 48  KKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALK-IQKPAFPW--------EFYMYRQLDQ 98
           + YQ     G G + +V     +       A+K I+K +           E  + + LD 
Sbjct: 37  EMYQRVKKLGSGAYGEVLLC-RDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDH 95

Query: 99  RISGRERSSFGFAHRIHLY-----SDYSILVCDYLSQGTLQDAINSYVVIGKSMEEVLCI 153
                        + + LY          LV +    G L D I           EV   
Sbjct: 96  P------------NIMKLYDFFEDKRNYYLVMECYKGGELFDEIIHR----MKFNEVDAA 139

Query: 154 YYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTV 192
               ++L  +  LH   I+H D KP+NLL+     +  +
Sbjct: 140 VIIKQVLSGVTYLHKHNIVHRDLKPENLLLESKEKDALI 178

>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus} Length = 476

 Score = 42.1 bits (99), Expect = 2e-04
 Identities = 36/158 (22%), Positives = 60/158 (37%), Gaps = 22/158 (13%)

Query: 35  NNSSRNKTIEIGGKKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKI-QKPAFPWEFYMY 93
                +  ++IG   Y +    G G F KV     +      VA+KI  +          
Sbjct: 5   EKQKHDGRVKIG--HYILGDTLGVGTFGKVKVG-KHELTGHKVAVKILNRQKI-----RS 56

Query: 94  RQLDQRISGRERS---SFGFAHRIHLY-----SDYSILVCDYLSQGTLQDAINSYVVIGK 145
             +  +I  RE      F   H I LY          +V +Y+S G L D    Y+    
Sbjct: 57  LDVVGKIR-REIQNLKLFRHPHIIKLYQVISTPSDIFMVMEYVSGGELFD----YICKNG 111

Query: 146 SMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLI 183
            ++E        ++L  ++  H   ++H D KP+N+L+
Sbjct: 112 RLDEKESRRLFQQILSGVDYCHRHMVVHRDLKPENVLL 149

>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A Length = 573

 Score = 42.1 bits (99), Expect = 2e-04
 Identities = 25/148 (16%), Positives = 48/148 (32%), Gaps = 28/148 (18%)

Query: 48  KKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKI-------QKPAFPWEFYMYRQLDQRI 100
             Y I    G G F  V +        +  A K         K     E      L    
Sbjct: 157 DHYDIHEELGTGAFGVVHRV-TERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHP- 214

Query: 101 SGRERSSFGFAHRIHLY-----SDYSILVCDYLSQGTLQDAINSYVVIGKSMEEVLCIYY 155
                        ++L+      +  +++ +++S G L + +         M E   + Y
Sbjct: 215 -----------TLVNLHDAFEDDNEMVMIYEFMSGGELFEKV---ADEHNKMSEDEAVEY 260

Query: 156 TIEMLCILESLHDVGIIHGDFKPDNLLI 183
             ++   L  +H+   +H D KP+N++ 
Sbjct: 261 MRQVCKGLCHMHENNYVHLDLKPENIMF 288

>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A* Length = 287

 Score = 41.4 bits (98), Expect = 2e-04
 Identities = 32/175 (18%), Positives = 60/175 (34%), Gaps = 34/175 (19%)

Query: 32  SSLNNSSRNKTIEIGGKKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKI---------Q 82
           S   N     T     ++Y I    G+G F +V K   +   +   A+K+          
Sbjct: 9   SGRENLYFQGTFA---ERYNIVCMLGKGSFGEVLKC-KDRITQQEYAVKVINKASAKNKD 64

Query: 83  KPAFPWEFYMYRQLDQRISGRERSSFGFAHRIHLY-----SDYSILVCDYLSQGTLQDAI 137
                 E  + ++LD              + + L+     S    +V +  + G L D I
Sbjct: 65  TSTILREVELLKKLDHP------------NIMKLFEILEDSSSFYIVGELYTGGELFDEI 112

Query: 138 NSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTV 192
               +  K   E        ++   +  +H   I+H D KP+N+L+     +  +
Sbjct: 113 ----IKRKRFSEHDAARIIKQVFSGITYMHKHNIVHRDLKPENILLESKEKDCDI 163

>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A* Length = 373

 Score = 41.5 bits (98), Expect = 2e-04
 Identities = 11/30 (36%), Positives = 19/30 (63%)

Query: 154 YYTIEMLCILESLHDVGIIHGDFKPDNLLI 183
           +Y  E+   L  LH + I++ D KP+N+L+
Sbjct: 143 FYAAEIASALGYLHSLNIVYRDLKPENILL 172

>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* Length = 351

 Score = 41.5 bits (98), Expect = 3e-04
 Identities = 37/152 (24%), Positives = 59/152 (38%), Gaps = 29/152 (19%)

Query: 49  KYQIKGCAGQGGFAKVFKAYVNGDPEDVVALK-----IQKPAFPW----EFYMYRQLDQR 99
           KY+     GQG F +VFKA  +      VALK      +K  FP     E  + + L   
Sbjct: 18  KYEKLAKIGQGTFGEVFKA-RHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHE 76

Query: 100 --ISGRE----RSSFGFAHRIHLYSDYSILVCDYLSQ--GTLQDAINSYVVIGKSMEEVL 151
             ++  E    ++S     +  +Y     LV D+       L   +     +  ++ E+ 
Sbjct: 77  NVVNLIEICRTKASPYNRCKGSIY-----LVFDFCEHDLAGLLSNVL----VKFTLSEIK 127

Query: 152 CIYYTIEMLCILESLHDVGIIHGDFKPDNLLI 183
                  +L  L  +H   I+H D K  N+LI
Sbjct: 128 R--VMQMLLNGLYYIHRNKILHRDMKAANVLI 157

>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ... Length = 337

 Score = 41.4 bits (98), Expect = 3e-04
 Identities = 10/30 (33%), Positives = 19/30 (63%)

Query: 154 YYTIEMLCILESLHDVGIIHGDFKPDNLLI 183
           +Y  E++  LE LH   +++ D K +NL++
Sbjct: 109 FYGAEIVSALEYLHSRDVVYRDIKLENLML 138

>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A Length = 321

 Score = 41.1 bits (97), Expect = 3e-04
 Identities = 36/151 (23%), Positives = 52/151 (34%), Gaps = 31/151 (20%)

Query: 48  KKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALK-IQKPAFPWEFYMYRQLDQRISGRERS 106
             Y I    G G FA V K           A K I+K          RQ      G  R 
Sbjct: 12  DFYDIGEELGSGQFAIVKKC-REKSTGLEYAAKFIKK----------RQSRASRRGVSRE 60

Query: 107 SF--------GFAHR--IHLYSDYS-----ILVCDYLSQGTLQDAINSYVVIGKSMEEVL 151
                        H   I L+  Y      +L+ + +S G L D +       +S+ E  
Sbjct: 61  EIEREVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFL----AQKESLSEEE 116

Query: 152 CIYYTIEMLCILESLHDVGIIHGDFKPDNLL 182
              +  ++L  +  LH   I H D KP+N++
Sbjct: 117 ATSFIKQILDGVNYLHTKKIAHFDLKPENIM 147

>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens} Length = 311

 Score = 41.0 bits (97), Expect = 3e-04
 Identities = 39/146 (26%), Positives = 59/146 (40%), Gaps = 25/146 (17%)

Query: 49  KYQIKGCAGQGGFAKVFKAYVNGDPEDVVALK-----IQKPAFPW----EFYMYRQLDQR 99
           KY+  G  G+G +  VFK   N D   +VA+K        P        E  M +QL   
Sbjct: 4   KYEKIGKIGEGSYGVVFKC-RNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHP 62

Query: 100 --ISGRERSSFGFAHRIHLYSDYSILVCDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTI 157
             ++  E     F  +  L+     LV +Y    T+   ++ Y    + + E L    T 
Sbjct: 63  NLVNLLEV----FRRKRRLH-----LVFEYCDH-TVLHELDRY---QRGVPEHLVKSITW 109

Query: 158 EMLCILESLHDVGIIHGDFKPDNLLI 183
           + L  +   H    IH D KP+N+LI
Sbjct: 110 QTLQAVNFCHKHNCIHRDVKPENILI 135

>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A* Length = 345

 Score = 41.1 bits (97), Expect = 3e-04
 Identities = 13/30 (43%), Positives = 20/30 (66%)

Query: 154 YYTIEMLCILESLHDVGIIHGDFKPDNLLI 183
           +Y+ E+   L  LH+ GII+ D K DN+L+
Sbjct: 114 FYSAEISLALNYLHERGIIYRDLKLDNVLL 143

>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A* Length = 345

 Score = 40.7 bits (96), Expect = 4e-04
 Identities = 12/30 (40%), Positives = 20/30 (66%)

Query: 154 YYTIEMLCILESLHDVGIIHGDFKPDNLLI 183
           +Y  E++  L+ LH  GI++ D K DN+L+
Sbjct: 122 FYAAEIILGLQFLHSKGIVYRDLKLDNILL 151

>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus} Length = 396

 Score = 40.8 bits (96), Expect = 4e-04
 Identities = 13/30 (43%), Positives = 20/30 (66%)

Query: 154 YYTIEMLCILESLHDVGIIHGDFKPDNLLI 183
           +Y+ E+   L  LH+ GII+ D K DN+L+
Sbjct: 157 FYSAEISLALNYLHERGIIYRDLKLDNVLL 186

>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens} Length = 353

 Score = 40.7 bits (96), Expect = 4e-04
 Identities = 20/73 (27%), Positives = 33/73 (45%), Gaps = 17/73 (23%)

Query: 115 HLYSDYSILVCDYLSQGTL----QDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVG 170
            L+      V ++++ G L    Q +        +  E     +Y  E++  L  LHD G
Sbjct: 98  RLF-----FVMEFVNGGDLMFHIQKS-------RRFDEARAR-FYAAEIISALMFLHDKG 144

Query: 171 IIHGDFKPDNLLI 183
           II+ D K DN+L+
Sbjct: 145 IIYRDLKLDNVLL 157

>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A Length = 674

 Score = 41.2 bits (96), Expect = 4e-04
 Identities = 20/73 (27%), Positives = 30/73 (41%), Gaps = 17/73 (23%)

Query: 115 HLYSDYSILVCDYLSQGTL----QDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVG 170
            LY      V +Y++ G L    Q         G+  E     +Y  E+   L  L   G
Sbjct: 416 RLY-----FVMEYVNGGDLMYHIQQV-------GRFKEPHAV-FYAAEIAIGLFFLQSKG 462

Query: 171 IIHGDFKPDNLLI 183
           II+ D K DN+++
Sbjct: 463 IIYRDLKLDNVML 475

>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A* Length = 464

 Score = 41.0 bits (96), Expect = 4e-04
 Identities = 16/42 (38%), Positives = 24/42 (57%)

Query: 142 VIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLI 183
           VI   ++     Y   +MLC ++ LH  GIIH D KP N+++
Sbjct: 156 VIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVV 197

>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A* Length = 361

 Score = 40.8 bits (96), Expect = 5e-04
 Identities = 37/162 (22%), Positives = 57/162 (35%), Gaps = 34/162 (20%)

Query: 37  SSRNKTIEIGGKKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALK-IQKPAFPWEFYMYRQ 95
           + + + +E     Y I    G G FA V K           A K I+K          RQ
Sbjct: 4   TFKQQKVE---DFYDIGEELGSGQFAIVKKC-REKSTGLEYAAKFIKK----------RQ 49

Query: 96  LDQRISGRERSSF--------GFAHR--IHLYSDYS-----ILVCDYLSQGTLQDAINSY 140
                 G  R              H   I L+  Y      +L+ + +S G L D +   
Sbjct: 50  SRASRRGVCREEIEREVSILRQVLHPNIITLHDVYENRTDVVLILELVSGGELFDFL--- 106

Query: 141 VVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLL 182
               +S+ E     +  ++L  +  LH   I H D KP+N++
Sbjct: 107 -AQKESLSEEEATSFIKQILDGVNYLHTKKIAHFDLKPENIM 147

>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7 Length = 387

 Score = 40.9 bits (96), Expect = 5e-04
 Identities = 34/147 (23%), Positives = 50/147 (34%), Gaps = 28/147 (19%)

Query: 48  KKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKI-------QKPAFPWEFYMYRQLDQRI 100
             Y I    G G F  V +  V      V   K         K     E  +  QL    
Sbjct: 51  DYYDILEELGSGAFGVVHRC-VEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHP- 108

Query: 101 SGRERSSFGFAHRIHLY-----SDYSILVCDYLSQGTLQDAINSYVVIGKSMEEVLCIYY 155
                        I+L+         +L+ ++LS G L D I         M E   I Y
Sbjct: 109 -----------KLINLHDAFEDKYEMVLILEFLSGGELFDRI---AAEDYKMSEAEVINY 154

Query: 156 TIEMLCILESLHDVGIIHGDFKPDNLL 182
             +    L+ +H+  I+H D KP+N++
Sbjct: 155 MRQACEGLKHMHEHSIVHLDIKPENIM 181

>3sg8_A APH(2'')-ID; antibiotic resistance enzyme, transferase, aminoglycoside, phosphorylation, transferase-antibiotic complex; HET: TOY; 1.80A {Enterococcus casseliflavus} PDB: 3sg9_A* 3n4v_A 3n4t_A 3n4u_A 3r81_A* 3r80_A* 3r7z_A* 3r82_A* 3vcq_A* 4dbx_A 4de4_A* 4dfb_A* 4dfu_A* 4dt9_A* 4dt8_A* 4dtb_A* 3sgc_A 4dta_A* 3lzh_A Length = 304

 Score = 40.2 bits (94), Expect = 6e-04
 Identities = 7/25 (28%), Positives = 15/25 (60%), Gaps = 1/25 (4%)

Query: 171 IIHGDFKPDNLLIRYARDELT-VLD 194
           +IH DF  D++L    ++ +  ++D
Sbjct: 193 LIHNDFSSDHILFDTEKNTICGIID 217

>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A* Length = 327

 Score = 40.3 bits (95), Expect = 6e-04
 Identities = 32/179 (17%), Positives = 60/179 (33%), Gaps = 31/179 (17%)

Query: 18  YHRSNKVYSGKVALSSLNNSSRNKTIEIGGKKYQIKGCA-GQGGFAKVFKAYVNGDPEDV 76
           +H  +      +   +L      +        Y +     G+G FA V +  ++      
Sbjct: 2   HHHHHHSSGVDLGTENLYFQ-SMENFN---NFYILTSKELGRGKFAVVRQC-ISKSTGQE 56

Query: 77  VALK-IQKPAFPWEFYMYRQLDQRISGRE----RSSFGFAHRIHLY-----SDYSILVCD 126
            A K ++K           Q  +     E      +      I+L+     +   IL+ +
Sbjct: 57  YAAKFLKKRRR-------GQDCRAEILHEIAVLELAKSCPRVINLHEVYENTSEIILILE 109

Query: 127 YLSQGTLQDAINSYVVIGKSME---EVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLL 182
           Y + G +         + +  E   E   I    ++L  +  LH   I+H D KP N+L
Sbjct: 110 YAAGGEIFSLC-----LPELAEMVSENDVIRLIKQILEGVYYLHQNNIVHLDLKPQNIL 163

>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei} Length = 504

 Score = 40.5 bits (95), Expect = 6e-04
 Identities = 26/148 (17%), Positives = 50/148 (33%), Gaps = 18/148 (12%)

Query: 48  KKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKI---QKPAFPWEFYMYRQLDQRISGRE 104
           + Y      G G + +V       +     A+K+    +          + +++      
Sbjct: 36  ESYFKVRKLGSGAYGEVLLC-KEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIY 94

Query: 105 R-----SSFGFAHRIHLY-----SDYSILVCDYLSQGTLQDAINSYVVIGKSMEEVLCIY 154
                  S    + I L+       Y  LV ++   G L + I +        +E     
Sbjct: 95  NEISLLKSLDHPNIIKLFDVFEDKKYFYLVTEFYEGGELFEQIINR----HKFDECDAAN 150

Query: 155 YTIEMLCILESLHDVGIIHGDFKPDNLL 182
              ++L  +  LH   I+H D KP+N+L
Sbjct: 151 IMKQILSGICYLHKHNIVHRDIKPENIL 178

>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ... Length = 283

 Score = 39.9 bits (94), Expect = 6e-04
 Identities = 34/151 (22%), Positives = 53/151 (35%), Gaps = 31/151 (20%)

Query: 48  KKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALK-IQKPAFPWEFYMYRQLDQRISGRERS 106
             Y++    G G FA V K           A K I+K          R+L     G  R 
Sbjct: 5   DHYEMGEELGSGQFAIVRKC-RQKGTGKEYAAKFIKK----------RRLSSSRRGVSRE 53

Query: 107 SF--------GFAHR--IHLY-----SDYSILVCDYLSQGTLQDAINSYVVIGKSMEEVL 151
                        H   I L+         +L+ + +S G L D +       +S+ E  
Sbjct: 54  EIEREVNILREIRHPNIITLHDIFENKTDVVLILELVSGGELFDFL----AEKESLTEDE 109

Query: 152 CIYYTIEMLCILESLHDVGIIHGDFKPDNLL 182
              +  ++L  +  LH   I H D KP+N++
Sbjct: 110 ATQFLKQILDGVHYLHSKRIAHFDLKPENIM 140

>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens} Length = 326

 Score = 40.3 bits (95), Expect = 6e-04
 Identities = 33/162 (20%), Positives = 53/162 (32%), Gaps = 31/162 (19%)

Query: 48  KKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALK-IQKPAFPWEFYMYRQLDQRISGRERS 106
             Y      G G FA V K           A K I+K          R+      G  R 
Sbjct: 11  DYYDTGEELGSGQFAVVKKC-REKSTGLQYAAKFIKK----------RRTKSSRRGVSRE 59

Query: 107 SF--------GFAHR--IHLY-----SDYSILVCDYLSQGTLQDAINSYVVIGKSMEEVL 151
                        H   I L+         IL+ + ++ G L D +       +S+ E  
Sbjct: 60  DIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFL----AEKESLTEEE 115

Query: 152 CIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVL 193
              +  ++L  +  LH + I H D KP+N+++         +
Sbjct: 116 ATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRI 157

>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B Length = 326

 Score = 39.9 bits (94), Expect = 7e-04
 Identities = 35/157 (22%), Positives = 59/157 (37%), Gaps = 37/157 (23%)

Query: 49  KYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFPWEFYMYRQLDQRISG------ 102
           +Y+     G+G + KVFKA    +    VALK  +            +     G      
Sbjct: 12  QYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVR------------VQTGEEGMPLSTI 59

Query: 103 RE----RSSFGFAHR--IHLY---------SDYSI-LVCDYLSQGTLQDAINSYVVIGKS 146
           RE    R    F H   + L+          +  + LV +++ Q  L   ++     G  
Sbjct: 60  REVAVLRHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQ-DLTTYLDKVPEPGVP 118

Query: 147 MEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLI 183
            E +       ++L  L+ LH   ++H D KP N+L+
Sbjct: 119 TETIKD--MMFQLLRGLDFLHSHRVVHRDLKPQNILV 153

>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} Length = 331

 Score = 39.9 bits (94), Expect = 8e-04
 Identities = 31/146 (21%), Positives = 57/146 (39%), Gaps = 25/146 (17%)

Query: 49  KYQIKGCAGQGGFAKVFKAYVNGDPEDVVALK-----IQKPAFPW----EFYMYRQLDQR 99
           KY+  G  G+G +  V K   N D   +VA+K                 E  + +QL   
Sbjct: 26  KYENLGLVGEGSYGMVMKC-RNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHE 84

Query: 100 --ISGRERSSFGFAHRIHLYSDYSILVCDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTI 157
             ++  E        +   Y     LV +++   T+ D +  +      ++  +   Y  
Sbjct: 85  NLVNLLEV----CKKKKRWY-----LVFEFVDH-TILDDLELF---PNGLDYQVVQKYLF 131

Query: 158 EMLCILESLHDVGIIHGDFKPDNLLI 183
           +++  +   H   IIH D KP+N+L+
Sbjct: 132 QIINGIGFCHSHNIIHRDIKPENILV 157

>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} Length = 271

 Score = 39.6 bits (93), Expect = 8e-04
 Identities = 32/147 (21%), Positives = 51/147 (34%), Gaps = 41/147 (27%)

Query: 57  GQGGFAKVFKAYVNGDPEDVVALKIQKPAFPWEFYMYRQLDQRISGRERSSF-------- 108
           G GGF KV++A+  GD    VA+K             R        +   +         
Sbjct: 16  GIGGFGKVYRAFWIGDE---VAVKA-----------ARHDPDEDISQTIENVRQEAKLFA 61

Query: 109 GFAHR--IHLY------SDYSILVCDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIE-- 158
              H   I L        +  + V ++   G L   ++     GK +   + + + ++  
Sbjct: 62  MLKHPNIIALRGVCLKEPNLCL-VMEFARGGPLNRVLS-----GKRIPPDILVNWAVQIA 115

Query: 159 --MLCILESLHDVGIIHGDFKPDNLLI 183
             M   L     V IIH D K  N+LI
Sbjct: 116 RGMNY-LHDEAIVPIIHRDLKSSNILI 141

>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ... Length = 371

 Score = 39.7 bits (93), Expect = 9e-04
 Identities = 16/45 (35%), Positives = 25/45 (55%)

Query: 140 YVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIR 184
             VI   ++     Y   +MLC ++ LH  GIIH D KP N++++
Sbjct: 117 CQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVK 161

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	351
4aw0_A	311	HPDK1, 3-phosphoinositide-dependent protein kinase	100.0
3hyh_A	275	Carbon catabolite-derepressing protein kinase; kin	100.0
4fih_A	346	Serine/threonine-protein kinase PAK 4; kinase doma	100.0
4b9d_A	350	Serine/threonine-protein kinase NEK1; transferase,	100.0
4fie_A	423	Serine/threonine-protein kinase PAK 4; kinase doma	100.0
3ubd_A	304	Ribosomal protein S6 kinase alpha-3; kinase-inhibi	100.0
3fpq_A	290	Serine/threonine-protein kinase WNK1; protein seri	100.0
4g3f_A	336	NF-kappa-beta-inducing kinase; non-RD kinase, prot	100.0
4asz_A	299	BDNF/NT-3 growth factors receptor; transferase, TR	100.0
4aoj_A	329	High affinity nerve growth factor receptor; transf	100.0
3omv_A	307	RAF proto-oncogene serine/threonine-protein kinas;	100.0
4g31_A	299	Eukaryotic translation initiation factor 2-alpha;	100.0
4b99_A	398	Mitogen-activated protein kinase 7; transferase, i	100.0
3v5w_A	689	G-protein coupled receptor kinase 2; inhibitor com	100.0
4gt4_A	308	Tyrosine-protein kinase transmembrane receptor RO;	100.0
4f9c_A	361	Cell division cycle 7-related protein kinase; Ser/	100.0
4ase_A	353	Vascular endothelial growth factor receptor 2; tra	100.0
3e7e_A	365	HBUB1, BUB1A, mitotic checkpoint serine/threonine-	100.0
3uto_A	573	Twitchin; kinase, muscle sarcomere, transferase; H	100.0
3hmm_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	100.0
1o6l_A	337	RAC-beta serine/threonine protein kinase; protein	100.0
3fe3_A	328	MAP/microtubule affinity-regulating kinase 3; seri	100.0
3txo_A	353	PKC-L, NPKC-ETA, protein kinase C ETA type; phosph	100.0
3zgw_A	347	Maternal embryonic leucine zipper kinase; transfer	100.0
3fxz_A	297	Serine/threonine-protein kinase PAK 1; transferase	100.0
4dc2_A	396	Protein kinase C IOTA type; kinase, substrate, cel	100.0
1xjd_A	345	Protein kinase C, theta type; PKC-theta, ATP, AMP,	100.0
2i0e_A	353	Protein kinase C-beta II; serine/threonine protein	100.0
1fot_A	318	TPK1 delta, CAMP-dependent protein kinase type 1;	100.0
3h4j_B	336	AMPK kdaid, SNF1-like protein kinase SSP2; ATP-bin	100.0
2yab_A	361	Death-associated protein kinase 2; apoptosis, tran	100.0
3a8x_A	345	Protein kinase C IOTA type; transferase; HET: TPO;	100.0
3c0i_A	351	Peripheral plasma membrane protein CASK; neurexin,	100.0
2r5t_A	373	Serine/threonine-protein kinase SGK1; AGC protein	100.0
3soa_A	444	Calcium/calmodulin-dependent protein kinase type a	100.0
1rdq_E	350	PKA C-alpha, CAMP-dependent protein kinase, alpha-	100.0
1tki_A	321	Titin; serine kinase, muscle, autoinhibition; 2.00	100.0
3p1a_A	311	MYT1 kinase, membrane-associated tyrosine- and thr	100.0
3a62_A	327	Ribosomal protein S6 kinase beta-1; kinase domain,	100.0
2bdw_A	362	Hypothetical protein K11E8.1D; kinase, calmodulin	100.0
2qr7_A	342	Ribosomal protein S6 kinase alpha-3; kinase domain	100.0
4ejn_A	446	RAC-alpha serine/threonine-protein kinase; AKT1, a	100.0
3uc3_A	361	Serine/threonine-protein kinase SRK2I; SNRK2, ABA	100.0
2y0a_A	326	Death-associated protein kinase 1; transferase, ca	100.0
3niz_A	311	Rhodanese family protein; structural genomics, str	100.0
4fr4_A	384	YANK1, serine/threonine-protein kinase 32A; struct	100.0
3tki_A	323	Serine/threonine-protein kinase CHK1; cell checkpo	100.0
3gni_B	389	Strad alpha; kinase fold, pseudokinase, alpha heli	100.0
3fdn_A	279	Serine/threonine-protein kinase 6; aurora kinase i	100.0
4eqm_A	294	Protein kinase; transferase; HET: ANP; 3.00A {Stap	100.0
3dbq_A	343	Dual specificity protein kinase TTK; MPS1 structur	100.0
3f3z_A	277	Calcium/calmodulin-dependent protein kinase with d	100.0
3ork_A	311	Serine/threonine protein kinase; structural genomi	100.0
3fme_A	290	Dual specificity mitogen-activated protein kinase;	100.0
3cok_A	278	Serine/threonine-protein kinase PLK4; POLO-like ki	100.0
3o0g_A	292	Cell division protein kinase 5; kinase activator c	100.0
3g33_A	308	Cell division protein kinase 4; Ser/Thr protein ki	100.0
4euu_A	319	Serine/threonine-protein kinase TBK1; ATP binding,	100.0
1kob_A	387	Twitchin; kinase, intrasteric regulation; 2.30A {A	100.0
3llt_A	360	Serine/threonine kinase-1, pflammer; lammer kinase	100.0
1nxk_A	400	MAP kinase-activated protein kinase 2; MK2, phosph	100.0
3pfq_A	674	PKC-B, PKC-beta, protein kinase C beta type; phosp	100.0
2y94_A	476	5'-AMP-activated protein kinase catalytic subunit;	100.0
3s95_A	310	LIMK-1, LIM domain kinase 1; structural genomics,	100.0
3byv_A	377	Rhoptry kinase; malaria, transferase, structural g	100.0
2eue_A	275	Carbon catabolite derepressing protein kinase; kin	100.0
2c30_A	321	Serine/threonine-protein kinase PAK 6; CRIB domain	100.0
2zv2_A	298	Calcium/calmodulin-dependent protein kinase kinas;	100.0
2zmd_A	390	Dual specificity protein kinase TTK; MPS1, T686A,	100.0
2w4o_A	349	Calcium/calmodulin-dependent protein kinase type I	100.0
2a2a_A	321	Death-associated protein kinase 2; autoinhibition,	100.0
3v8s_A	410	RHO-associated protein kinase 1; dimerization, myo	100.0
3kn6_A	325	Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1	100.0
3oz6_A	388	Mitogen-activated protein kinase 1, serine/threon	100.0
1ob3_A	288	PFPK5, cell division control protein 2 homolog; tr	100.0
3kk8_A	284	Calcium/calmodulin dependent protein kinase II; AT	100.0
2vgo_A	284	Serine/threonine-protein kinase 12-A; nucleotide-b	100.0
4aw2_A	437	Serine/threonine-protein kinase MRCK alpha; transf	100.0
3n9x_A	432	Phosphotransferase; malaria kinase, structural gen	100.0
1x8b_A	289	WEE1HU, WEE1-like protein kinase; cell cycle, tran	100.0
3q60_A	371	ROP5B; pseudokinase, transferase; HET: ATP; 1.72A	100.0
2jam_A	304	Calcium/calmodulin-dependent protein kinase type 1	100.0
2acx_A	576	G protein-coupled receptor kinase 6; GRK, G transf	100.0
2vd5_A	412	DMPK protein; serine/threonine-protein kinase, kin	100.0
3dls_A	335	PAS domain-containing serine/threonine-protein KI;	100.0
2rku_A	294	Serine/threonine-protein kinase PLK1; structure of	100.0
3mwu_A	486	Calmodulin-domain protein kinase 1; serine/threoni	100.0
3gbz_A	329	Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-	100.0
4aaa_A	331	Cyclin-dependent kinase-like 2; transferase, phosp	100.0
2ac3_A	316	MAP kinase-interacting serine/threonine kinase 2;	100.0
3is5_A	285	Calcium-dependent protein kinase; CDPK, structural	100.0
3qd2_B	332	Eukaryotic translation initiation factor 2-alpha;	100.0
2x4f_A	373	Myosin light chain kinase family member 4; LUNG, b	100.0
2owb_A	335	Serine/threonine-protein kinase PLK1; catalytic do	100.0
3soc_A	322	Activin receptor type-2A; structural genomics cons	100.0
4agu_A	311	Cyclin-dependent kinase-like 1; transferase, phosp	100.0
3nyv_A	484	Calmodulin-domain protein kinase 1; serine/threoni	100.0
3ttj_A	464	Mitogen-activated protein kinase 10; JNK3, protein	100.0
2x7f_A	326	TRAF2 and NCK-interacting protein kinase; serine/t	100.0
2pmi_A	317	Negative RE, cyclin-dependent protein kinase PHO85	100.0
3c4z_A	543	Rhodopsin kinase; Ser/Thr kinase, RGS homology dom	100.0
3rp9_A	458	Mitogen-activated protein kinase; structural genom	100.0
3hko_A	345	Calcium/calmodulin-dependent protein kinase with d	100.0
3p86_A	309	Serine/threonine-protein kinase CTR1; ETR1, ERS1,	100.0
3lij_A	494	Calcium/calmodulin dependent protein kinase with A	100.0
3eqc_A	360	Dual specificity mitogen-activated protein kinase;	100.0
3kvw_A	429	DYRK2, dual specificity tyrosine-phosphorylation-r	100.0
3an0_A	340	Dual specificity mitogen-activated protein kinase;	100.0
3mtl_A	324	Cell division protein kinase 16; pctaire1, indirub	100.0
2j7t_A	302	Serine/threonine-protein kinase 10; transferase, A	100.0
3vhe_A	359	Vascular endothelial growth factor receptor 2; kin	100.0
2psq_A	370	Fibroblast growth factor receptor 2; kinase domain	100.0
3fhr_A	336	MAP kinase-activated protein kinase 3; kinase-inhi	100.0
3q5i_A	504	Protein kinase; CDPK, malaria, phosphotransferase,	100.0
2h6d_A	276	5'-AMP-activated protein kinase catalytic subunit	100.0
2buj_A	317	Serine/threonine-protein kinase 16; transferase, A	100.0
1u5q_A	348	Serine/threonine protein kinase TAO2; transferase;	100.0
3bhy_A	283	Death-associated protein kinase 3; death associate	100.0
1cm8_A	367	Phosphorylated MAP kinase P38-gamma; phosphorylati	100.0
3i6u_A	419	CDS1, serine/threonine-protein kinase CHK2; Ser/Th	100.0
1csn_A	298	Casein kinase-1; phosphotransferase; HET: ATP; 2.0	100.0
2yex_A	276	Serine/threonine-protein kinase CHK1; transferase,	100.0
3tt0_A	382	Basic fibroblast growth factor receptor 1; kinase	100.0
3com_A	314	Serine/threonine-protein kinase 4; MST1, STE20-lik	100.0
2qkw_B	321	Protein kinase; three-helix bundle motif, AVRPTO-P	100.0
3kul_A	325	Ephrin type-A receptor 8; ATP-binding, kinase, nuc	100.0
2y7j_A	365	Phosphorylase B kinase gamma catalytic chain, test	100.0
4hcu_A	269	Tyrosine-protein kinase ITK/TSK; transferase-trans	100.0
3nsz_A	330	CK II alpha, casein kinase II subunit alpha; inhib	100.0
3sxs_A	268	Cytoplasmic tyrosine-protein kinase BMX; transfera	100.0
2xrw_A	371	Mitogen-activated protein kinase 8; transcription,	100.0
3ll6_A	337	Cyclin G-associated kinase; transferase, protein k	100.0
3eb0_A	383	Putative uncharacterized protein; kinase cryptospo	100.0
3a7i_A	303	MST3 kinase, serine/threonine kinase 24 (STE20 hom	100.0
1z57_A	339	Dual specificity protein kinase CLK1; protein tyro	100.0
3mi9_A	351	Cell division protein kinase 9; P-TEFB, HIV-1, pro	100.0
3ugc_A	295	Tyrosine-protein kinase JAK2; small molecule inhib	100.0
1rjb_A	344	FL cytokine receptor; kinase, structure, autoinhib	100.0
1wak_A	397	Serine/threonine-protein kinase SPRK1; SRPK, trans	100.0
1vzo_A	355	Ribosomal protein S6 kinase alpha 5; protein kinas	100.0
1t4h_A	290	Serine/threonine-protein kinase WNK1; protein seri	100.0
3l9p_A	367	Anaplastic lymphoma kinase; kinase domain, ATP-bin	100.0
3qyz_A	364	Mitogen-activated protein kinase 1; transferase, s	100.0
4fvq_A	289	Tyrosine-protein kinase JAK2; janus protein kinase	100.0
2wtk_C	305	Serine/threonine-protein kinase 11; transferase-me	100.0
3lm5_A	327	Serine/threonine-protein kinase 17B; STK17B, serin	100.0
3lb7_A	307	RAF proto-oncogene serine/threonine-protein kinas;	100.0
3uzp_A	296	CKI-delta, CKID, casein kinase I isoform delta; CK	100.0
3qup_A	323	Tyrosine-protein kinase receptor TYRO3; protein ki	100.0
3gen_A	283	Tyrosine-protein kinase BTK; bruton'S tyrosine kin	100.0
4hgt_A	296	Casein kinase I isoform delta; CK1D, inhibitor, tr	100.0
2vwi_A	303	Serine/threonine-protein kinase OSR1; STE kinase,	100.0
2fst_X	367	Mitogen-activated protein kinase 14; active mutant	100.0
2ivs_A	314	Proto-oncogene tyrosine-protein kinase receptor RE	100.0
3aln_A	327	Dual specificity mitogen-activated protein kinase;	100.0
1t46_A	313	HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcom	100.0
2w5a_A	279	Serine/threonine-protein kinase NEK2; Ser/Thr prot	100.0
2izr_A	330	Casein kinase I isoform gamma-3; serine/threonine-	100.0
2vx3_A	382	Dual specificity tyrosine-phosphorylation- regula	100.0
2ycf_A	322	Serine/threonine-protein kinase CHK2; transferase,	100.0
1luf_A	343	Muscle-specific tyrosine kinase receptor MUSK; pho	100.0
2eu9_A	355	Dual specificity protein kinase CLK3; kinase domai	100.0
1phk_A	298	Phosphorylase kinase; glycogen metabolism, transfe	100.0
3cek_A	313	Dual specificity protein kinase TTK; HMPS1, PYT, E	100.0
2xir_A	316	Vascular endothelial growth factor receptor 2; ang	100.0
1mp8_A	281	Focal adhesion kinase 1; tyrosine protein kinase,	100.0
3cbl_A	377	C-FES, proto-oncogene tyrosine-protein kinase FES/	100.0
2wei_A	287	Calmodulin-domain protein kinase 1, putative; nucl	100.0
2r3i_A	299	Cell division protein kinase 2; serine/threonine-p	100.0
3uim_A	326	Brassinosteroid insensitive 1-associated receptor;	100.0
3kex_A	325	Receptor tyrosine-protein kinase ERBB-3; kinase do	100.0
2h34_A	309	Serine/threonine-protein kinase PKNE; apoenzyme, t	100.0
1q8y_A	373	SR protein kinase; transferase; HET: ADP ADE; 2.05	100.0
1blx_A	326	Cyclin-dependent kinase 6; inhibitor protein, cycl	100.0
3q4u_A	301	Activin receptor type-1; structural genomics conso	100.0
1ua2_A	346	CAK, cell division protein kinase 7; cell cycle, p	100.0
3lxl_A	327	Tyrosine-protein kinase JAK3; TYK2, inflammation,	100.0
3kfa_A	288	Tyrosine-protein kinase ABL1; CML, drug resistance	100.0
3dtc_A	271	Mitogen-activated protein kinase kinase kinase 9;	100.0
3poz_A	327	Epidermal growth factor receptor; kinase domain, a	100.0
3op5_A	364	Serine/threonine-protein kinase VRK1; adenosine tr	100.0
1j1b_A	420	Glycogen synthase kinase-3 beta; complex, TAU, AMP	100.0
3lzb_A	327	Epidermal growth factor receptor; epidermal growth	100.0
4f0f_A	287	Serine/threonine-protein kinase ROCO4; LRRK2, ATP-	100.0
3t9t_A	267	Tyrosine-protein kinase ITK/TSK; kinase domain, al	100.0
3a99_A	320	Proto-oncogene serine/threonine-protein kinase PI;	100.0
2clq_A	295	Mitogen-activated protein kinase kinase kinase 5;	100.0
1p4o_A	322	Insulin-like growth factor I receptor protein; IGF	100.0
2pvf_A	334	Fibroblast growth factor receptor 2; kinase domain	100.0
3brb_A	313	Proto-oncogene tyrosine-protein kinase MER; ATP-bi	100.0
2wqm_A	310	Serine/threonine-protein kinase NEK7; ATP-binding,	100.0
4e7w_A	394	Glycogen synthase kinase 3; GSK3, PTyr195, transfe	100.0
2dyl_A	318	Dual specificity mitogen-activated protein kinase	100.0
4exu_A	371	Mitogen-activated protein kinase 13; P38 kinase, t	100.0
4eut_A	396	Serine/threonine-protein kinase TBK1; ATP binding,	100.0
2a19_B	284	Interferon-induced, double-stranded RNA-activated	100.0
3og7_A	289	AKAP9-BRAF fusion protein; proto-oncogene, V600E,	100.0
2v62_A	345	Serine/threonine-protein kinase VRK2; transferase,	100.0
4e5w_A	302	Tyrosine-protein kinase JAK1; kinase domain, trans	100.0
3g2f_A	336	Bone morphogenetic protein receptor type-2; kinase	100.0
3cc6_A	281	Protein tyrosine kinase 2 beta; focal adhesion kin	100.0
2i1m_A	333	Macrophage colony-stimulating factor 1 receptor; k	100.0
3pg1_A	362	Mitogen-activated protein kinase, putative (MAP K	100.0
3e3p_A	360	Protein kinase, putative glycogen synthase kinase;	100.0
2b9h_A	353	MAP kinase FUS3, mitogen-activated protein kinase	100.0
2i6l_A	320	Mitogen-activated protein kinase 6; MAPK6, ERK3, e	100.0
1u59_A	287	Tyrosine-protein kinase ZAP-70; transferase; HET:	100.0
2yfx_A	327	Tyrosine-protein kinase receptor; nucleotide-bindi	100.0
2pml_X	348	PFPK7, Ser/Thr protein kinase; phosphorylati trans	100.0
3p23_A	432	Serine/threonine-protein kinase/endoribonuclease;	100.0
1zy4_A	303	Serine/threonine-protein kinase GCN2; translation	100.0
2iwi_A	312	Serine/threonine-protein kinase PIM-2; nucleotide-	100.0
3f66_A	298	Hepatocyte growth factor receptor; C-Met, protein	100.0
2jii_A	352	Serine/threonine-protein kinase VRK3 molecule: VA	100.0
3mdy_A	337	Bone morphogenetic protein receptor type-1B; compl	100.0
1mqb_A	333	Ephrin type-A receptor 2; tyrosine protein kinase,	100.0
3rgf_A	405	Cyclin-dependent kinase 8; protein kinase complex,	100.0
3dzo_A	413	Rhoptry kinase domain; parasitic disease, transfer	100.0
2qol_A	373	Ephrin receptor; receptor tyrosine kinase, juxtame	100.0
1k9a_A	450	Carboxyl-terminal SRC kinase; COOH-terminal SRC ki	100.0
1xbb_A	291	Tyrosine-protein kinase SYK; gleevec, STI-571, ima	100.0
1opk_A	495	P150, C-ABL, proto-oncogene tyrosine-protein kinas	100.0
3kmu_A	271	ILK, integrin-linked kinase; cell adhesion, ANK re	100.0
3coi_A	353	Mitogen-activated protein kinase 13; P38D, P38delt	100.0
3sv0_A	483	Casein kinase I-like; typical kinase domain fold,	100.0
1u46_A	291	ACK-1, activated CDC42 kinase 1; tyrosine kinase,	100.0
3c1x_A	373	Hepatocyte growth factor receptor; receptor tyrosi	100.0
2w1i_A	326	JAK2; chromosomal rearrangement, nucleotide-bindin	100.0
1byg_A	278	CSK, protein (C-terminal SRC kinase); protein kina	100.0
1fvr_A	327	Tyrosine-protein kinase TIE-2; tyrosine kinase, tr	100.0
3lxp_A	318	Non-receptor tyrosine-protein kinase TYK2; JAK3, i	100.0
3pls_A	298	Macrophage-stimulating protein receptor; protein k	100.0
1qcf_A	454	Haematopoetic cell kinase (HCK); tyrosine kinase-i	100.0
1qpc_A	279	LCK kinase; alpha beta fold, transferase; HET: PTR	100.0
1fmk_A	452	C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyros	100.0
2nru_A	307	Interleukin-1 receptor-associated kinase 4; inhibi	100.0
3m2w_A	299	MAP kinase-activated protein kinase 2; small molec	100.0
2eva_A	307	TAK1 kinase - TAB1 chimera fusion protein; transfe	100.0
1b6c_B	342	TGF-B superfamily receptor type I; complex (isomer	100.0
3qa8_A	676	MGC80376 protein; kinase ubiquitin-like domain, ph	100.0
3gxj_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	100.0
2rio_A	434	Serine/threonine-protein kinase/endoribonuclease I	100.0
2h8h_A	535	Proto-oncogene tyrosine-protein kinase SRC; SRC ki	100.0
2pzi_A	681	Probable serine/threonine-protein kinase PKNG; ATP	100.0
2ozo_A	613	Tyrosine-protein kinase ZAP-70; inactive ZAP-70, t	100.0
2j0j_A	656	Focal adhesion kinase 1; cell migration, FERM, tra	100.0
4fl3_A	635	Tyrosine-protein kinase SYK; transferase; HET: ANP	100.0
2y4i_B	319	KSR2, HKSR2, kinase suppressor of RAS 2; transfera	100.0
3uqc_A	286	Probable conserved transmembrane protein; structur	100.0
2vuw_A	336	Serine/threonine-protein kinase haspin; cell cycle	100.0
4azs_A	569	Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15	99.96
3en9_A	540	Glycoprotease, O-sialoglycoprotein endopeptidase/p	99.9
1zar_A	282	RIO2 kinase; serine kinase, winged-helix, RIO doma	99.86
1zth_A	258	RIO1 serine protein kinase; ribosome biogenesis, r	99.8
4gyi_A	397	RIO2 kinase; protein kinase, ADP complex, phosphoa	99.68
3tm0_A	263	Aminoglycoside 3'-phosphotransferase; protein kina	99.2
1nd4_A	264	Aminoglycoside 3'-phosphotransferase; protein kina	99.0
3sg8_A	304	APH(2'')-ID; antibiotic resistance enzyme, transfe	98.86
3dxp_A	359	Putative acyl-COA dehydrogenase; protein kinase-li	98.83
3r70_A	320	Aminoglycoside phosphotransferase; structural geno	98.43
4gkh_A	272	Aminoglycoside 3'-phosphotransferase APHA1-IAB; py	98.29
3tdw_A	306	Gentamicin resistance protein; kinase, phosphoryl	98.22
2yle_A	229	Protein spire homolog 1; actin-binding protein, ac	97.95
3ovc_A	362	Hygromycin-B 4-O-kinase; aminoglycoside phosphotra	97.92
2q83_A	346	YTAA protein; 2635576, structural genomics, joint	97.85
2olc_A	397	MTR kinase, methylthioribose kinase; kinase ADP-2H	97.85
3d1u_A	288	Putative fructosamine-3-kinase; YP_290396.1, struc	97.84
3ats_A	357	Putative uncharacterized protein; hypothetical pro	97.77
2pyw_A	420	Uncharacterized protein; 5-methylthioribose kinase	97.63
3jr1_A	312	Putative fructosamine-3-kinase; YP_719053.1, struc	97.27
3dxq_A	301	Choline/ethanolamine kinase family protein; NP_106	97.19
3csv_A	333	Aminoglycoside phosphotransferase; YP_614837.1, ph	97.1
3f7w_A	288	Putative fructosamine-3-kinase; YP_290396.1, struc	97.07
2ppq_A	322	HSK, HK, homoserine kinase; structural genomics, M	96.83
3i1a_A	339	Spectinomycin phosphotransferase; protein kinase,	96.37
1zyl_A	328	Hypothetical protein YIHE; putative protein kinase	96.16
3feg_A	379	Choline/ethanolamine kinase; non-protein kinase, c	95.78
1nw1_A	429	Choline kinase (49.2 KD); phospholipid synthesis,	94.77
3f2s_A	401	CK, chetk-alpha, choline kinase alpha; non-protein	94.46
2qg7_A	458	Ethanolamine kinase PV091845; malaria, SGC, struct	93.3
3mes_A	424	Choline kinase; malaria, structural genomics, stru	91.66
3c5i_A	369	Choline kinase; choline, kinase, malaria, transfer	85.22

>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...

Probab=100.00  E-value=9.3e-58  Score=405.71  Aligned_cols=251  Identities=18%  Similarity=0.174  Sum_probs=207.6

Q ss_pred             eeEEEEEEeeccCceEEEEEEecCCCCceEEEEecCCCCC---hHHHHHHHHHhhhccccccccccceeeecccCeeEEE
Q 018699           48 KKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFP---WEFYMYRQLDQRISGRERSSFGFAHRIHLYSDYSILV  124 (351)
Q Consensus        48 ~~Y~i~~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~~---~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv  124 (351)
                      ++|++.+.||+|+||+||+|+ +..+|+.||||++.+...   .....+......+....|++++.+..++..++.+|+|
T Consensus        32 ~dy~i~~~lG~G~fg~V~~a~-~~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~yiv  110 (311)
T 4aw0_A           32 EDFKFGKILGEGSFSTVVLAR-ELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFG  110 (311)
T ss_dssp             GGEEEEEEEEEETTEEEEEEE-ETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred             cccEEEEEEecccCeEEEEEE-ECCCCCEEEEEEEEHHHCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEE
Confidence            579999999999999999999 578899999999864321   1122222233344566799999999999999999999


Q ss_pred             EEecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeeccCCCCCcccC
Q 018699          125 CDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSGPWQDQ  204 (351)
Q Consensus       125 ~e~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~~~~~~~~~  204 (351)
                      ||||+||+|.+++.+.    +.+++..++.++.||+.||.|||++||+||||||+|||++                 .++
T Consensus       111 mEy~~gG~L~~~i~~~----~~l~e~~~~~~~~qi~~al~ylH~~~IiHRDlKPeNILl~-----------------~~g  169 (311)
T 4aw0_A          111 LSYAKNGELLKYIRKI----GSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLN-----------------EDM  169 (311)
T ss_dssp             ECCCTTEEHHHHHHHH----SSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEC-----------------TTS
T ss_pred             EecCCCCCHHHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCHHHeEEc-----------------CCC
Confidence            9999999999999873    6899999999999999999999999999999999999999                 788


Q ss_pred             CeEEeecCCccccccCCCCccccccccCCCcccceeccCCCCCccchHhHHHHHHHHHHhCccccccccCCCCCceeeec
Q 018699          205 GLCLVDWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQEKKPWKFQVDTYGLCAIVHMMLHNSYMEIEKKASPDGGLVYLP  284 (351)
Q Consensus       205 ~~~l~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~p~~~~~~~~~~~~~~~~  284 (351)
                      .+||+|||+|.............+.+||+.|+|||++.+..|+.++|||||||++|+|++|.+||...+.......+...
T Consensus       170 ~vKl~DFGla~~~~~~~~~~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~~~~~~i~~~  249 (311)
T 4aw0_A          170 HIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEGLIFAKIIKL  249 (311)
T ss_dssp             CEEECCCTTCEECCTTTTCCCBCCCCSCGGGCCHHHHHHSCBCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHT
T ss_pred             CEEEEEcCCceecCCCCCcccccCcccCcccCCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcC
Confidence            89999999998654333344456779999999999999999999999999999999999999999765433111122233


Q ss_pred             CcchhhhhHHHHHHHHHHHHhcCCCCCChHHHHHHHH
Q 018699          285 KLSFKRYWKVELWKSLFTNLLNMSSGNDKEVLQNLQK  321 (351)
Q Consensus       285 ~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~~  321 (351)
                      ...+|..++ +.+++||.+||++||++|||+.|++.|
T Consensus       250 ~~~~p~~~s-~~~~dli~~lL~~dp~~R~t~~e~~~~  285 (311)
T 4aw0_A          250 EYDFPEKFF-PKARDLVEKLLVLDATKRLGCEEMEGY  285 (311)
T ss_dssp             CCCCCTTCC-HHHHHHHHHHSCSSGGGSTTSGGGTCH
T ss_pred             CCCCCcccC-HHHHHHHHHHccCCHhHCcChHHHcCC
Confidence            344555566 889999999999999999999986443

>3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A

Probab=100.00  E-value=1.8e-56  Score=392.08  Aligned_cols=250  Identities=20%  Similarity=0.203  Sum_probs=191.9

Q ss_pred             eeEEEEEEeeccCceEEEEEEecCCCCceEEEEecCCCCChHHH---HHHHHHhhhccccccccccceeeecccCeeEEE
Q 018699           48 KKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFPWEFY---MYRQLDQRISGRERSSFGFAHRIHLYSDYSILV  124 (351)
Q Consensus        48 ~~Y~i~~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~~~e~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv  124 (351)
                      ++|++.+.||+|+||+||+|+ +..+|+.||||++.+.......   .+...........|++++.+.+++..++.+|+|
T Consensus        13 g~Y~i~~~lG~G~fg~V~~~~-~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~iv   91 (275)
T 3hyh_A           13 GNYQIVKTLGEGSFGKVKLAY-HTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMV   91 (275)
T ss_dssp             -CCEEEEEEEC---CCEEEEE-CTTTCCEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred             eCeEEEEEEecCcCeEEEEEE-ECCCCCEEEEEEEeHHHcCCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEEE
Confidence            589999999999999999999 6788999999998765332211   122222233455789999999999999999999


Q ss_pred             EEecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeeccCCCCCcccC
Q 018699          125 CDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSGPWQDQ  204 (351)
Q Consensus       125 ~e~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~~~~~~~~~  204 (351)
                      |||+ +|+|.+++..    ...+++..++.++.||+.||+|||++||+||||||+||+++                 .++
T Consensus        92 mEy~-~g~L~~~l~~----~~~l~e~~~~~~~~qi~~al~ylH~~~IiHRDiKP~NILl~-----------------~~~  149 (275)
T 3hyh_A           92 IEYA-GNELFDYIVQ----RDKMSEQEARRFFQQIISAVEYCHRHKIVHRDLKPENLLLD-----------------EHL  149 (275)
T ss_dssp             EECC-CEEHHHHHHH----SCSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCTTTEEEC-----------------TTC
T ss_pred             EeCC-CCCHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCChHHeEEC-----------------CCC
Confidence            9999 7899999987    57899999999999999999999999999999999999999                 778


Q ss_pred             CeEEeecCCccccccCCCCccccccccCCCcccceeccCCCC-CccchHhHHHHHHHHHHhCccccccccCCCCCceeee
Q 018699          205 GLCLVDWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQEKKPW-KFQVDTYGLCAIVHMMLHNSYMEIEKKASPDGGLVYL  283 (351)
Q Consensus       205 ~~~l~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~-~~~~DiwslG~il~~l~~g~~p~~~~~~~~~~~~~~~  283 (351)
                      .+||+|||+|....   ......+.+||+.|+|||++.+..+ +.++|||||||++|+|++|..||...+.......+..
T Consensus       150 ~vkl~DFGla~~~~---~~~~~~~~~GT~~Y~APE~~~~~~y~~~~~DiwSlGvily~lltg~~PF~~~~~~~~~~~i~~  226 (275)
T 3hyh_A          150 NVKIADFGLSNIMT---DGNFLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIPVLFKNISN  226 (275)
T ss_dssp             CEEECCSSCC------------------CTTSCHHHHSSSSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHH
T ss_pred             CEEEeecCCCeecC---CCCccCCeeECcccCChhhhcCCCCCCChhhhHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHc
Confidence            89999999996532   2333456789999999999998886 4899999999999999999999976443211111223


Q ss_pred             cCcchhhhhHHHHHHHHHHHHhcCCCCCChHHHHHHHHHHH
Q 018699          284 PKLSFKRYWKVELWKSLFTNLLNMSSGNDKEVLQNLQKSFQ  324 (351)
Q Consensus       284 ~~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~~~~~  324 (351)
                      ....+|...+ +.+++||.+||++||++|||+.|+++|||.
T Consensus       227 ~~~~~p~~~s-~~~~~li~~~L~~dP~~R~s~~eil~hpw~  266 (275)
T 3hyh_A          227 GVYTLPKFLS-PGAAGLIKRMLIVNPLNRISIHEIMQDDWF  266 (275)
T ss_dssp             TCCCCCTTSC-HHHHHHHHHHSCSSGGGSCCHHHHHHCHHH
T ss_pred             CCCCCCCCCC-HHHHHHHHHHccCChhHCcCHHHHHcCccc
Confidence            3344555566 889999999999999999999999999875

>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*

Probab=100.00  E-value=1.3e-56  Score=404.13  Aligned_cols=252  Identities=18%  Similarity=0.163  Sum_probs=205.3

Q ss_pred             eeEEEEEEeeccCceEEEEEEecCCCCceEEEEecCCCCChHHHHHHHHHhhhccccccccccceeeecccCeeEEEEEe
Q 018699           48 KKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFPWEFYMYRQLDQRISGRERSSFGFAHRIHLYSDYSILVCDY  127 (351)
Q Consensus        48 ~~Y~i~~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~  127 (351)
                      ..|++.++||+|+||+||+|+ +..+|+.||||++........+.+......+....|++++.+..++..++.+|+||||
T Consensus        74 ~~y~~~~~iG~G~fG~V~~a~-~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~ivmEy  152 (346)
T 4fih_A           74 SYLDNFIKIGEGSTGIVCIAT-VRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEF  152 (346)
T ss_dssp             GTEEEEEEEEECSSCEEEEEE-ETTTCCEEEEEEEEGGGCSSGGGGHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEECC
T ss_pred             HhcEEeEEeecCcCeEEEEEE-ECCCCCEEEEEEEecCchhHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEeC
Confidence            469999999999999999999 5788999999998643222222222222233445789999999999999999999999


Q ss_pred             cCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeeccCCCCCcccCCeE
Q 018699          128 LSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSGPWQDQGLC  207 (351)
Q Consensus       128 ~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~~~~~~~~~~~~  207 (351)
                      |+||+|.+++..     ..+++..++.++.||+.||.|||++||+||||||+|||++                 .++.+|
T Consensus       153 ~~gg~L~~~l~~-----~~l~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl~-----------------~~g~vK  210 (346)
T 4fih_A          153 LEGGALTDIVTH-----TRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLT-----------------HDGRVK  210 (346)
T ss_dssp             CTTEEHHHHHHH-----SCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEC-----------------TTCCEE
T ss_pred             CCCCcHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCHHHEEEC-----------------CCCCEE
Confidence            999999999875     4699999999999999999999999999999999999999                 788899


Q ss_pred             EeecCCccccccCCCCccccccccCCCcccceeccCCCCCccchHhHHHHHHHHHHhCccccccccCCCCCcee---eec
Q 018699          208 LVDWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQEKKPWKFQVDTYGLCAIVHMMLHNSYMEIEKKASPDGGLV---YLP  284 (351)
Q Consensus       208 l~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~p~~~~~~~~~~~~~---~~~  284 (351)
                      |+|||+|.....  ......+.+||+.|+|||++.+..|+.++|||||||++|+|++|.+||...+.......+   ..+
T Consensus       211 l~DFGla~~~~~--~~~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~~~~~~i~~~~~~  288 (346)
T 4fih_A          211 LSDFGFCAQVSK--EVPRRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLPP  288 (346)
T ss_dssp             ECCCTTCEECCS--SSCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSSCC
T ss_pred             EecCcCceecCC--CCCcccccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHHHHHHHcCCCC
Confidence            999999975432  233456678999999999999999999999999999999999999999765432111111   112


Q ss_pred             CcchhhhhHHHHHHHHHHHHhcCCCCCChHHHHHHHHHHHH
Q 018699          285 KLSFKRYWKVELWKSLFTNLLNMSSGNDKEVLQNLQKSFQD  325 (351)
Q Consensus       285 ~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~~~~~~  325 (351)
                      ....+..++ +.+++||.+||++||++|||+.|+|+|||..
T Consensus       289 ~~~~~~~~s-~~~~dli~~~L~~dP~~R~ta~e~l~Hp~~~  328 (346)
T 4fih_A          289 RLKNLHKVS-PSLKGFLDRLLVRDPAQRATAAELLKHPFLA  328 (346)
T ss_dssp             CCSCGGGSC-HHHHHHHHHHSCSSTTTSCCHHHHTTCGGGG
T ss_pred             CCCccccCC-HHHHHHHHHHcCCChhHCcCHHHHhcCHhhc
Confidence            233334455 8899999999999999999999999999753

>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*

Probab=100.00  E-value=9.1e-57  Score=405.73  Aligned_cols=255  Identities=17%  Similarity=0.132  Sum_probs=201.8

Q ss_pred             eeEEEEEEeeccCceEEEEEEecCCCCceEEEEecCCCCChHH--HHHHHHHhhhccccccccccceeeecccCeeEEEE
Q 018699           48 KKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFPWEF--YMYRQLDQRISGRERSSFGFAHRIHLYSDYSILVC  125 (351)
Q Consensus        48 ~~Y~i~~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~~~e~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~  125 (351)
                      ++|++.+.||+|+||+||+|+ +..+|+.||||++.+....+.  +.+......+....|++++.+.+++..++.+|+||
T Consensus        24 e~Y~~~~~lG~G~fg~V~~a~-~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~yiVm  102 (350)
T 4b9d_A           24 EKYVRLQKIGEGSFGKAILVK-STEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNIVQYRESFEENGSLYIVM  102 (350)
T ss_dssp             CCEEEEEEC------CEEEEE-ETTTCCEEEEEEEECTTSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred             cceEEeEEEecCCCeEEEEEE-ECCCCCEEEEEEEehHHCCHHHHHHHHHHHHHHHHCCCCCCCcEEEEEEECCEEEEEE
Confidence            689999999999999999999 578899999999876644332  22222233345567999999999999999999999


Q ss_pred             EecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeeccCCCCCcccCC
Q 018699          126 DYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSGPWQDQG  205 (351)
Q Consensus       126 e~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~~~~~~~~~~  205 (351)
                      |||+||+|.+++....  +..+++..++.|+.||+.||.|||++||+||||||+|||++                 .++.
T Consensus       103 Ey~~gg~L~~~i~~~~--~~~~~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl~-----------------~~g~  163 (350)
T 4b9d_A          103 DYCEGGDLFKRINAQK--GVLFQEDQILDWFVQICLALKHVHDRKILHRDIKSQNIFLT-----------------KDGT  163 (350)
T ss_dssp             ECCTTCBHHHHHHHTT--TCCCCHHHHHHHHHHHHHHHHHHHHTTCEETTCCGGGEEEC-----------------TTCC
T ss_pred             eCCCCCcHHHHHHHcC--CCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCCHHHEEEC-----------------CCCC
Confidence            9999999999997642  45689999999999999999999999999999999999999                 7888


Q ss_pred             eEEeecCCccccccCCCCccccccccCCCcccceeccCCCCCccchHhHHHHHHHHHHhCccccccccCCCCCceee-ec
Q 018699          206 LCLVDWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQEKKPWKFQVDTYGLCAIVHMMLHNSYMEIEKKASPDGGLVY-LP  284 (351)
Q Consensus       206 ~~l~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~p~~~~~~~~~~~~~~-~~  284 (351)
                      +||+|||+|+....  ......+.+||+.|+|||++.+..|+.++|||||||++|+|++|..||...+.......+. ..
T Consensus       164 vKl~DFGla~~~~~--~~~~~~~~~GT~~YmAPE~l~~~~y~~~~DiwSlGvilyemltG~~PF~~~~~~~~~~~i~~~~  241 (350)
T 4b9d_A          164 VQLGDFGIARVLNS--TVELARACIGTPYYLSPEICENKPYNNKSDIWALGCVLYELCTLKHAFEAGSMKNLVLKIISGS  241 (350)
T ss_dssp             EEECSTTEESCCCH--HHHHHHHHHSCCTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHTC
T ss_pred             EEEcccccceeecC--CcccccccCCCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHHHHHHHcCC
Confidence            99999999975321  1122345679999999999999999999999999999999999999997654321100011 11


Q ss_pred             CcchhhhhHHHHHHHHHHHHhcCCCCCChHHHHHHHHHHHH
Q 018699          285 KLSFKRYWKVELWKSLFTNLLNMSSGNDKEVLQNLQKSFQD  325 (351)
Q Consensus       285 ~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~~~~~~  325 (351)
                      .++.+..++ +.+++||.+||++||++|||+.|+|+|||..
T Consensus       242 ~~~~~~~~s-~~~~~li~~~L~~dP~~R~s~~e~l~hp~~~  281 (350)
T 4b9d_A          242 FPPVSLHYS-YDLRSLVSQLFKRNPRDRPSVNSILEKGFIA  281 (350)
T ss_dssp             CCCCCTTSC-HHHHHHHHHHTCSSGGGSCCHHHHHTSHHHH
T ss_pred             CCCCCccCC-HHHHHHHHHHccCChhHCcCHHHHhcCHHhh
Confidence            123344455 8899999999999999999999999998754

>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}

Probab=100.00  E-value=1.9e-55  Score=405.99  Aligned_cols=252  Identities=18%  Similarity=0.163  Sum_probs=206.4

Q ss_pred             eeEEEEEEeeccCceEEEEEEecCCCCceEEEEecCCCCChHHHHHHHHHhhhccccccccccceeeecccCeeEEEEEe
Q 018699           48 KKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFPWEFYMYRQLDQRISGRERSSFGFAHRIHLYSDYSILVCDY  127 (351)
Q Consensus        48 ~~Y~i~~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~  127 (351)
                      +.|++.++||+|+||+||+|+ +..+|+.||||++........+.+......+....|++++.+.+++..++.+|+||||
T Consensus       151 ~~y~~~~~iG~G~fG~V~~a~-~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~iVmEy  229 (423)
T 4fie_A          151 SYLDNFIKIGEGSTGIVCIAT-VRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEF  229 (423)
T ss_dssp             GTEEEEEEEEECSSCEEEEEE-ETTTCCEEEEEEEESTTCSSGGGHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred             HhcEeeeEeccCcCcEEEEEE-ECCCCCEEEEEEEeccchhHHHHHHHHHHHHHhCCCCCCCceEEEEEECCEEEEEEeC
Confidence            569999999999999999999 5788999999998654333222222222334456789999999999999999999999


Q ss_pred             cCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeeccCCCCCcccCCeE
Q 018699          128 LSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSGPWQDQGLC  207 (351)
Q Consensus       128 ~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~~~~~~~~~~~~  207 (351)
                      |+||+|.+++..     ..+++..++.++.||+.||.|||++||+||||||+|||++                 .++.+|
T Consensus       230 ~~gG~L~~~i~~-----~~l~e~~~~~~~~qil~aL~ylH~~~IiHRDiKp~NILl~-----------------~~g~vK  287 (423)
T 4fie_A          230 LEGGALTDIVTH-----TRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLT-----------------HDGRVK  287 (423)
T ss_dssp             CTTEEHHHHHHH-----SCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSTTTEEEC-----------------TTCCEE
T ss_pred             CCCCcHHHHHhc-----cCCCHHHHHHHHHHHHHHHHHHHHCCeecccCCHHHEEEc-----------------CCCCEE
Confidence            999999999875     4699999999999999999999999999999999999999                 788899


Q ss_pred             EeecCCccccccCCCCccccccccCCCcccceeccCCCCCccchHhHHHHHHHHHHhCccccccccCCCCCcee---eec
Q 018699          208 LVDWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQEKKPWKFQVDTYGLCAIVHMMLHNSYMEIEKKASPDGGLV---YLP  284 (351)
Q Consensus       208 l~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~p~~~~~~~~~~~~~---~~~  284 (351)
                      |+|||+|.....  ......+.+||+.|||||++.+..|+.++|||||||++|+|++|.+||...........+   ..+
T Consensus       288 l~DFGla~~~~~--~~~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~~~~~~i~~~~~~  365 (423)
T 4fie_A          288 LSDFGFCAQVSK--EVPRRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLPP  365 (423)
T ss_dssp             ECCCTTCEECCS--SCCCBCCCEECTTTCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSCCC
T ss_pred             EecCccceECCC--CCccccccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHHHHHHHcCCCC
Confidence            999999975432  233456678999999999999999999999999999999999999999765432111111   112


Q ss_pred             CcchhhhhHHHHHHHHHHHHhcCCCCCChHHHHHHHHHHHH
Q 018699          285 KLSFKRYWKVELWKSLFTNLLNMSSGNDKEVLQNLQKSFQD  325 (351)
Q Consensus       285 ~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~~~~~~  325 (351)
                      ....+..++ +.+++||.+||.+||++|||+.|+|+|||..
T Consensus       366 ~~~~~~~~s-~~~~dli~~~L~~dP~~R~ta~ell~Hp~~~  405 (423)
T 4fie_A          366 RLKNLHKVS-PSLKGFLDRLLVRDPAQRATAAELLKHPFLA  405 (423)
T ss_dssp             CCSCTTSSC-HHHHHHHHHHSCSSTTTSCCHHHHTTCGGGG
T ss_pred             CCcccccCC-HHHHHHHHHHcCCChhHCcCHHHHhcCHHhc
Confidence            222333445 8899999999999999999999999999754

>3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A*

Probab=100.00  E-value=4.9e-56  Score=394.53  Aligned_cols=253  Identities=20%  Similarity=0.242  Sum_probs=204.1

Q ss_pred             eeEEEEEEeeccCceEEEEEEec--CCCCceEEEEecCCCCChH--HHHHHHHHhhhccccccccccceeeecccCeeEE
Q 018699           48 KKYQIKGCAGQGGFAKVFKAYVN--GDPEDVVALKIQKPAFPWE--FYMYRQLDQRISGRERSSFGFAHRIHLYSDYSIL  123 (351)
Q Consensus        48 ~~Y~i~~~lg~G~~g~V~~a~~~--~~~~~~vaiK~~~~~~~~e--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  123 (351)
                      ++|++.+.||+|+||+||+|++.  ..+++.||||++.+.....  ..........+....|++++.+..++..++.+|+
T Consensus        24 ~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~i  103 (304)
T 3ubd_A           24 SQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIVKLHYAFQTEGKLYL  103 (304)
T ss_dssp             GGEEEEEEEECGGGCEEEEEEECSSTTTTCEEEEEEEESEEEEEEECC------CCCCCCCCTTEECEEEEEEETTEEEE
T ss_pred             cccEEEEEEecCCCeEEEEEEEccCCCCCEEEEEEEEehHHcChHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEE
Confidence            67999999999999999999852  3568899999987542211  1111112233456678999999999999999999


Q ss_pred             EEEecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeeccCCCCCccc
Q 018699          124 VCDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSGPWQD  203 (351)
Q Consensus       124 v~e~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~~~~~~~~  203 (351)
                      |||||+||+|.+++.+.    +.+++..++.++.||+.||.|||++||+||||||+|||++                 .+
T Consensus       104 vmEy~~gg~L~~~l~~~----~~l~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl~-----------------~~  162 (304)
T 3ubd_A          104 ILDFLRGGDLFTRLSKE----VMFTEEDVKFYLAELALALDHLHSLGIIYRDLKPENILLD-----------------EE  162 (304)
T ss_dssp             EECCCTTCEEHHHHHHH----CCCCHHHHHHHHHHHHHHHHHHHHTTCCCSSCCGGGEEEC-----------------TT
T ss_pred             EEEcCCCCCHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHHCCCcCCCCCHHHeEEc-----------------CC
Confidence            99999999999999873    6899999999999999999999999999999999999999                 78


Q ss_pred             CCeEEeecCCccccccCCCCccccccccCCCcccceeccCCCCCccchHhHHHHHHHHHHhCccccccccCCCCCceeee
Q 018699          204 QGLCLVDWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQEKKPWKFQVDTYGLCAIVHMMLHNSYMEIEKKASPDGGLVYL  283 (351)
Q Consensus       204 ~~~~l~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~p~~~~~~~~~~~~~~~  283 (351)
                      +.+||+|||+|+...  .......+.+||+.|+|||++.+..|+.++|||||||++|+|++|..||...+.......+..
T Consensus       163 g~vKl~DFGla~~~~--~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~PF~~~~~~~~~~~i~~  240 (304)
T 3ubd_A          163 GHIKLTDFGLSKESI--DHEKKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKETMTMILK  240 (304)
T ss_dssp             SCEEEESSEEEEC-------CCCCSCCCCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHH
T ss_pred             CCEEecccccceecc--CCCccccccccCcccCCHHHhccCCCCCCCcccchHHHHHHHHhCCCCCCCcCHHHHHHHHHc
Confidence            889999999996432  122334567899999999999999999999999999999999999999986544322222223


Q ss_pred             cCcchhhhhHHHHHHHHHHHHhcCCCCCChHH-----HHHHHHHHH
Q 018699          284 PKLSFKRYWKVELWKSLFTNLLNMSSGNDKEV-----LQNLQKSFQ  324 (351)
Q Consensus       284 ~~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~-----~e~l~~~~~  324 (351)
                      ....+|..++ +.+++||.+||++||++|||+     +|+++|||.
T Consensus       241 ~~~~~p~~~s-~~~~~li~~~L~~dP~~R~ta~~~~~~eil~Hp~f  285 (304)
T 3ubd_A          241 AKLGMPQFLS-PEAQSLLRMLFKRNPANRLGAGPDGVEEIKRHSFF  285 (304)
T ss_dssp             CCCCCCTTSC-HHHHHHHHHHTCSSGGGSTTCSTTTHHHHHTSGGG
T ss_pred             CCCCCCCcCC-HHHHHHHHHHcccCHHHCCCCCcCCHHHHHcCccc
Confidence            3445556666 889999999999999999984     799999864

>3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus}

Probab=100.00  E-value=4.7e-54  Score=379.92  Aligned_cols=250  Identities=19%  Similarity=0.172  Sum_probs=197.4

Q ss_pred             CeeEEEEEEeeccCceEEEEEEecCCCCceEEEEecCCCCChH--HHHHHHHHhhhccccccccccceeeecc----cCe
Q 018699           47 GKKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFPWE--FYMYRQLDQRISGRERSSFGFAHRIHLY----SDY  120 (351)
Q Consensus        47 ~~~Y~i~~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~~~e--~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~  120 (351)
                      ++-|++.++||+|+||+||+|. +..+++.||+|++.......  ...+...........|++++.+.+++..    ++.
T Consensus        25 gr~~~~~~~iG~G~fg~Vy~a~-~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~  103 (290)
T 3fpq_A           25 GRFLKFDIEIGRGSFKTVYKGL-DTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKC  103 (290)
T ss_dssp             SSEEEEEEEEEECSSEEEEEEE-ETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEEEETTEEE
T ss_pred             CceEEeeeEEecCcCcEEEEEE-ECCCCeEEEEEEEchhhCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEeeccCCCcE
Confidence            3445889999999999999999 57788999999986543322  2223333344556789999998887643    456


Q ss_pred             eEEEEEecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCC--ceecCCCCCcEEEeecCCcceeeccCCC
Q 018699          121 SILVCDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVG--IIHGDFKPDNLLIRYARDELTVLDHDRS  198 (351)
Q Consensus       121 ~~lv~e~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~--i~H~dl~p~Nill~~~~~~~~~~~~~~~  198 (351)
                      +|+|||||+||+|.+++.+    ...+++..++.++.||+.||.|||++|  |+||||||+|||++.             
T Consensus       104 ~~lvmEy~~gg~L~~~l~~----~~~l~~~~~~~~~~qi~~aL~ylH~~~~~IiHRDlKp~NILl~~-------------  166 (290)
T 3fpq_A          104 IVLVTELMTSGTLKTYLKR----FKVMKIKVLRSWCRQILKGLQFLHTRTPPIIHRDLKCDNIFITG-------------  166 (290)
T ss_dssp             EEEEEECCCSCBHHHHHHH----HSSCCHHHHHHHHHHHHHHHHHHHTSSSCCCCCCCCGGGEEESS-------------
T ss_pred             EEEEEeCCCCCCHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEecccChhheeEEC-------------
Confidence            8999999999999999987    468999999999999999999999998  999999999999972             


Q ss_pred             CCcccCCeEEeecCCccccccCCCCccccccccCCCcccceeccCCCCCccchHhHHHHHHHHHHhCccccccccCCCC-
Q 018699          199 GPWQDQGLCLVDWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQEKKPWKFQVDTYGLCAIVHMMLHNSYMEIEKKASPD-  277 (351)
Q Consensus       199 ~~~~~~~~~l~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~p~~~~~~~~~-  277 (351)
                         .++.+||+|||+|...    ......+.+||+.|||||++.+ .|+.++|||||||++|+|++|.+||........ 
T Consensus       167 ---~~g~vKl~DFGla~~~----~~~~~~~~~GTp~YmAPE~~~~-~y~~~~DiwSlGvilyelltg~~Pf~~~~~~~~~  238 (290)
T 3fpq_A          167 ---PTGSVKIGDLGLATLK----RASFAKAVIGTPEFMAPEMYEE-KYDESVDVYAFGMCMLEMATSEYPYSECQNAAQI  238 (290)
T ss_dssp             ---TTSCEEECCTTGGGGC----CTTSBEESCSSCCCCCGGGGGT-CCCTHHHHHHHHHHHHHHHHSSCTTTTCSSHHHH
T ss_pred             ---CCCCEEEEeCcCCEeC----CCCccCCcccCccccCHHHcCC-CCCcHHHHHHHHHHHHHHHHCCCCCCCCCcHHHH
Confidence               3577999999999642    2334456789999999999875 599999999999999999999999975332100 


Q ss_pred             Cceee--ecCcchhhhhHHHHHHHHHHHHhcCCCCCChHHHHHHHHHH
Q 018699          278 GGLVY--LPKLSFKRYWKVELWKSLFTNLLNMSSGNDKEVLQNLQKSF  323 (351)
Q Consensus       278 ~~~~~--~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~~~~  323 (351)
                      .....  ..+...+...+ +.+++||.+||++||++|||+.|+|+|||
T Consensus       239 ~~~i~~~~~~~~~~~~~~-~~~~~li~~~L~~dP~~R~s~~e~l~Hp~  285 (290)
T 3fpq_A          239 YRRVTSGVKPASFDKVAI-PEVKEIIEGCIRQNKDERYSIKDLLNHAF  285 (290)
T ss_dssp             HHHHTTTCCCGGGGGCCC-HHHHHHHHHHSCSSGGGSCCHHHHHTSGG
T ss_pred             HHHHHcCCCCCCCCccCC-HHHHHHHHHHccCChhHCcCHHHHhcCcc
Confidence            00000  11222333344 78999999999999999999999999986

>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*

Probab=100.00  E-value=1.1e-53  Score=384.01  Aligned_cols=249  Identities=18%  Similarity=0.132  Sum_probs=201.6

Q ss_pred             CeeEEEEEEeeccCceEEEEEEecCCCCceEEEEecCCCCChHHHHHHHHHhhhccccccccccceeeecccCeeEEEEE
Q 018699           47 GKKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFPWEFYMYRQLDQRISGRERSSFGFAHRIHLYSDYSILVCD  126 (351)
Q Consensus        47 ~~~Y~i~~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e  126 (351)
                      .+.|++.++||+|+||+||+|+ +..+|+.||||++.......    ++ ........|++++.+..++..++.+|+|||
T Consensus        57 ~~~~~~~~~lG~G~fG~Vy~a~-~~~~g~~vAiK~i~~~~~~~----~E-~~il~~l~HpnIV~l~~~~~~~~~~~ivmE  130 (336)
T 4g3f_A           57 VHWMTHQPRVGRGSFGEVHRMK-DKQTGFQCAVKKVRLEVFRV----EE-LVACAGLSSPRIVPLYGAVREGPWVNIFME  130 (336)
T ss_dssp             TTEEEEEEEEEEETTEEEEEEE-ETTTCCEEEEEEEETTTCCT----HH-HHTTTTCCCTTBCCEEEEEEETTEEEEEEC
T ss_pred             hhheEeCcEeccCCCeEEEEEE-ECCCCCEEEEEEECHHHhHH----HH-HHHHHhCCCCCCCcEEEEEEECCEEEEEEe
Confidence            4689999999999999999999 57889999999987653321    11 123345678999999999999999999999


Q ss_pred             ecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeeccCCCCCcccC-C
Q 018699          127 YLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSGPWQDQ-G  205 (351)
Q Consensus       127 ~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~~~~~~~~~-~  205 (351)
                      ||+||+|.+++...    +.+++..++.++.||+.||.|||++||+||||||+|||++                 .++ .
T Consensus       131 y~~gg~L~~~l~~~----~~l~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl~-----------------~~g~~  189 (336)
T 4g3f_A          131 LLEGGSLGQLIKQM----GCLPEDRALYYLGQALEGLEYLHTRRILHGDVKADNVLLS-----------------SDGSR  189 (336)
T ss_dssp             CCTTCBHHHHHHHH----SSCCHHHHHHHHHHHHHHHHHHHTTTEECSCCCGGGEEEC-----------------TTSCC
T ss_pred             ccCCCcHHHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHHCCceecccCHHHEEEe-----------------CCCCE
Confidence            99999999999874    6899999999999999999999999999999999999998                 565 5


Q ss_pred             eEEeecCCccccccCCCCc---cccccccCCCcccceeccCCCCCccchHhHHHHHHHHHHhCccccccccCCCCCceee
Q 018699          206 LCLVDWGRGIDLHLFPDNM---EFEGDCRTSGFRCIEMQEKKPWKFQVDTYGLCAIVHMMLHNSYMEIEKKASPDGGLVY  282 (351)
Q Consensus       206 ~~l~Dfg~a~~~~~~~~~~---~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~p~~~~~~~~~~~~~~  282 (351)
                      +||+|||+|..........   .....+||+.|||||++.+..|+.++|||||||++|+|++|.+||...........+.
T Consensus       190 vKl~DFGla~~~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~Pf~~~~~~~~~~~i~  269 (336)
T 4g3f_A          190 AALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHPWTQYFRGPLCLKIA  269 (336)
T ss_dssp             EEECCCTTCEEC------------CCCCCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSTTTCCSCCHHHHH
T ss_pred             EEEeeCCCCeEccCCCcccceecCCccccCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCHHHHHHHHH
Confidence            9999999997644222111   1234579999999999999999999999999999999999999998655442211111


Q ss_pred             e---cCcchhhhhHHHHHHHHHHHHhcCCCCCChHHHHHHHHHH
Q 018699          283 L---PKLSFKRYWKVELWKSLFTNLLNMSSGNDKEVLQNLQKSF  323 (351)
Q Consensus       283 ~---~~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~~~~  323 (351)
                      .   +...++..++ +.+++||.+||++||.+|||+.|+++|..
T Consensus       270 ~~~~~~~~~~~~~s-~~~~~li~~~L~~dP~~R~sa~el~~~l~  312 (336)
T 4g3f_A          270 SEPPPIREIPPSCA-PLTAQAIQEGLRKEPVHRASAMELRRKVG  312 (336)
T ss_dssp             HSCCGGGGSCTTSC-HHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred             cCCCCchhcCccCC-HHHHHHHHHHccCCHhHCcCHHHHHHHHH
Confidence            1   1123444555 88999999999999999999999998753

>4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A*

Probab=100.00  E-value=7.6e-53  Score=374.67  Aligned_cols=268  Identities=14%  Similarity=0.074  Sum_probs=206.3

Q ss_pred             EcCeeEEEEEEeeccCceEEEEEEec----CCCCceEEEEecCCCCChHHHHHHHHHhhhccccccccccceeeecccCe
Q 018699           45 IGGKKYQIKGCAGQGGFAKVFKAYVN----GDPEDVVALKIQKPAFPWEFYMYRQLDQRISGRERSSFGFAHRIHLYSDY  120 (351)
Q Consensus        45 i~~~~Y~i~~~lg~G~~g~V~~a~~~----~~~~~~vaiK~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  120 (351)
                      |..++|.+.+.||+|+||+||+|++.    ..++..||||++........+.+......+....|++++.+.+++..++.
T Consensus        10 I~r~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~~   89 (299)
T 4asz_A           10 IKRHNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGVCVEGDP   89 (299)
T ss_dssp             CCGGGEEEEEEEEC--CCCEEEEEECSCC----CEEEEEEEECSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSS
T ss_pred             cCHHHeEEeeEEeeCCCcEEEEEEECCcccCCCCEEEEEEEeCCCChHHHHHHHHHHHHHHhCCCCCCccEEEEEeeCCE
Confidence            45578999999999999999999863    24578999999986544333333333445566789999999999998999


Q ss_pred             eEEEEEecCCCCHHHHHHHHH---------hhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcce
Q 018699          121 SILVCDYLSQGTLQDAINSYV---------VIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELT  191 (351)
Q Consensus       121 ~~lv~e~~~~~sL~~~l~~~~---------~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~  191 (351)
                      +|+|||||++|+|.+++....         .....+++..+..++.||+.||.|||+++|+||||||+||+++       
T Consensus        90 ~~lV~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~iiHRDlKp~NILl~-------  162 (299)
T 4asz_A           90 LIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAGMVYLASQHFVHRDLATRNCLVG-------  162 (299)
T ss_dssp             EEEEEECCTTCBHHHHHHHTSHHHHHC----CCCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEC-------
T ss_pred             EEEEEEcCCCCcHHHHHHhcCcccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCccCHhhEEEC-------
Confidence            999999999999999997631         1124689999999999999999999999999999999999999       


Q ss_pred             eeccCCCCCcccCCeEEeecCCccccccCCCCccccccccCCCcccceeccCCCCCccchHhHHHHHHHHHHh-Cccccc
Q 018699          192 VLDHDRSGPWQDQGLCLVDWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQEKKPWKFQVDTYGLCAIVHMMLH-NSYMEI  270 (351)
Q Consensus       192 ~~~~~~~~~~~~~~~~l~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~-g~~p~~  270 (351)
                                .++.+||+|||+|+...............||+.|+|||++.+..|+.++|||||||++|||+| |..||.
T Consensus       163 ----------~~~~~Ki~DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~k~DVwS~Gvvl~Ellt~G~~Pf~  232 (299)
T 4asz_A          163 ----------ENLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWY  232 (299)
T ss_dssp             ----------GGGCEEECCCSCHHHHTGGGCEEETTTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTT
T ss_pred             ----------CCCcEEECCcccceecCCCCceeecCceecChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHcCCCCCCC
Confidence                      788899999999975432211122233468999999999999999999999999999999998 899997


Q ss_pred             cccCCCCCcee-eecCcchhhhhHHHHHHHHHHHHhcCCCCCChHHHHHHHHHHHHHHhhCh
Q 018699          271 EKKASPDGGLV-YLPKLSFKRYWKVELWKSLFTNLLNMSSGNDKEVLQNLQKSFQDYLCSNP  331 (351)
Q Consensus       271 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~~~~~~~~~~~~  331 (351)
                      ..+.......+ .....+.|..++ +.+.+||.+||+.||++|||+.++. ..+++.....|
T Consensus       233 ~~~~~~~~~~i~~~~~~~~p~~~~-~~~~~li~~cl~~dP~~RPs~~~i~-~~L~~~~~~~p  292 (299)
T 4asz_A          233 QLSNNEVIECITQGRVLQRPRTCP-QEVYELMLGCWQREPHMRKNIKGIH-TLLQNLAKASP  292 (299)
T ss_dssp             TSCHHHHHHHHHHTCCCCCCTTCC-HHHHHHHHHHTCSSGGGSCCHHHHH-HHHHHHHHHSC
T ss_pred             CCCHHHHHHHHHcCCCCCCCccch-HHHHHHHHHHcCCChhHCcCHHHHH-HHHHHHHhcCC
Confidence            64432110001 112233455555 8899999999999999999999984 34555555444

>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens}

Probab=100.00  E-value=6.6e-52  Score=373.51  Aligned_cols=271  Identities=13%  Similarity=0.062  Sum_probs=203.8

Q ss_pred             EEcCeeEEEEEEeeccCceEEEEEEec----CCCCceEEEEecCCCCChHHHHHHHHHhhhccccccccccceeeecccC
Q 018699           44 EIGGKKYQIKGCAGQGGFAKVFKAYVN----GDPEDVVALKIQKPAFPWEFYMYRQLDQRISGRERSSFGFAHRIHLYSD  119 (351)
Q Consensus        44 ~i~~~~Y~i~~~lg~G~~g~V~~a~~~----~~~~~~vaiK~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  119 (351)
                      .+..++|.+.++||+|+||+||+|++.    ..+++.||||++........+.+......+....|++++.+..++..++
T Consensus        37 ~i~~~d~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~  116 (329)
T 4aoj_A           37 HIKRRDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRFFGVCTEGR  116 (329)
T ss_dssp             BCCGGGEEEEEEEEECSSEEEEEEEESSSCC---CEEEEEEEESCCSHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSS
T ss_pred             ccCHHHeEEEEEEccCCCcEEEEEEECCcccCCCCeEEEEEEECcCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECC
Confidence            355678999999999999999999863    2467899999998664443333444444556778999999999999899


Q ss_pred             eeEEEEEecCCCCHHHHHHHHHh-----------hCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCC
Q 018699          120 YSILVCDYLSQGTLQDAINSYVV-----------IGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARD  188 (351)
Q Consensus       120 ~~~lv~e~~~~~sL~~~l~~~~~-----------~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~  188 (351)
                      .+|+|||||++|+|.+++.....           ...++++..+..|+.||+.||.|||+++|+||||||+||+++    
T Consensus       117 ~~~lV~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~iiHRDLKp~NILl~----  192 (329)
T 4aoj_A          117 PLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAGLHFVHRDLATRNCLVG----  192 (329)
T ss_dssp             SEEEEEECCTTCBHHHHHHTSSCC-----------CCSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEE----
T ss_pred             EEEEEEEcCCCCcHHHHHHhcCcccccccccccccCCCCCHHHHHHHHHHHHHHHHHHhcCCeecccccHhhEEEC----
Confidence            99999999999999999975311           124689999999999999999999999999999999999999    


Q ss_pred             cceeeccCCCCCcccCCeEEeecCCccccccCCCCccccccccCCCcccceeccCCCCCccchHhHHHHHHHHHHh-Ccc
Q 018699          189 ELTVLDHDRSGPWQDQGLCLVDWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQEKKPWKFQVDTYGLCAIVHMMLH-NSY  267 (351)
Q Consensus       189 ~~~~~~~~~~~~~~~~~~~l~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~-g~~  267 (351)
                                   .++.+||+|||+++...............||+.|||||++.+..++.++|||||||++|||+| |..
T Consensus       193 -------------~~~~~Ki~DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~~sDvwS~Gvvl~Ellt~G~~  259 (329)
T 4aoj_A          193 -------------QGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQ  259 (329)
T ss_dssp             -------------TTTEEEECCCC----------------CCCCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHTTSCC
T ss_pred             -------------CCCcEEEcccccceeccCCCcceecCcccccccccChhhhcCCCCCccccccchHHHHHHHHcCCCC
Confidence                         788899999999975432222223345678999999999999999999999999999999998 899


Q ss_pred             ccccccCCCCCce-eeecCcchhhhhHHHHHHHHHHHHhcCCCCCChHHHHHHHHHHHHHHhhChHH
Q 018699          268 MEIEKKASPDGGL-VYLPKLSFKRYWKVELWKSLFTNLLNMSSGNDKEVLQNLQKSFQDYLCSNPQL  333 (351)
Q Consensus       268 p~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~~~~~~~~~~~~~~  333 (351)
                      ||...+....... ......+.|..++ +.+.+||.+||+.||++|||+.|++.+ ++.....-|.+
T Consensus       260 Pf~~~~~~~~~~~i~~g~~~~~p~~~~-~~~~~li~~cl~~dP~~RPs~~ei~~~-L~~l~~~pp~~  324 (329)
T 4aoj_A          260 PWYQLSNTEAIDCITQGRELERPRACP-PEVYAIMRGCWQREPQQRHSIKDVHAR-LQALAQAPPVY  324 (329)
T ss_dssp             TTCSSCHHHHHHHHHHTCCCCCCTTCC-HHHHHHHHHHCCSSTTTSCCHHHHHHH-HHHHHHSCC--
T ss_pred             CCCCCCHHHHHHHHHcCCCCCCccccc-HHHHHHHHHHcCcChhHCcCHHHHHHH-HHHHhhCCccc
Confidence            9975433211000 1112334455566 889999999999999999999998764 45555554443

>3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens}

Probab=100.00  E-value=1.5e-51  Score=366.52  Aligned_cols=254  Identities=16%  Similarity=0.178  Sum_probs=195.8

Q ss_pred             EEEEcCeeEEEEEEeeccCceEEEEEEecCCCCceEEEEecCCCCChH--HHHHHHHHhhhccccccccccceeeecccC
Q 018699           42 TIEIGGKKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFPWE--FYMYRQLDQRISGRERSSFGFAHRIHLYSD  119 (351)
Q Consensus        42 ~~~i~~~~Y~i~~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~~~e--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  119 (351)
                      .++|..+++++.++||+|+||+||+|+++    ..||||+++......  .+.+...........|++++.+..+.. .+
T Consensus        30 ~Wei~~~~l~l~~~iG~G~fG~Vy~~~~~----~~vAvK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~-~~  104 (307)
T 3omv_A           30 YWEIEASEVMLSTRIGSGSFGTVYKGKWH----GDVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMT-KD  104 (307)
T ss_dssp             CCBCCTTSCCEEEECCCCSSSEEEEEESS----SEEEEEECCCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEC-SS
T ss_pred             CcEEcHHHeEEeeEEeeCCCcEEEEEEEC----CcEEEEEEEecCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEE-CC
Confidence            46788889999999999999999999852    358999987543332  233333334456678999999888765 45


Q ss_pred             eeEEEEEecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeeccCCCC
Q 018699          120 YSILVCDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSG  199 (351)
Q Consensus       120 ~~~lv~e~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~~~~  199 (351)
                      .+|+|||||+||+|.+++...   +..+++..+..|+.||+.||+|||+++|+||||||+|||++               
T Consensus       105 ~~~iVmEy~~gGsL~~~l~~~---~~~l~~~~~~~i~~qia~gL~yLH~~~IiHRDlKp~NILl~---------------  166 (307)
T 3omv_A          105 NLAIVTQWCEGSSLYKHLHVQ---ETKFQMFQLIDIARQTAQGMDYLHAKNIIHRDMKSNNIFLH---------------  166 (307)
T ss_dssp             SCEEEEECCSSCBHHHHHHTS---CCCCCHHHHHHHHHHHHHHHHHHHHTTCBCSCCCSSSEEEE---------------
T ss_pred             eEEEEEEcCCCCCHHHHHhhc---CCCCCHHHHHHHHHHHHHHHHHHHHCCccCCccCHHHEEEC---------------
Confidence            689999999999999999764   46799999999999999999999999999999999999999               


Q ss_pred             CcccCCeEEeecCCccccccCCCCccccccccCCCcccceeccC---CCCCccchHhHHHHHHHHHHhCccccccccCCC
Q 018699          200 PWQDQGLCLVDWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQEK---KPWKFQVDTYGLCAIVHMMLHNSYMEIEKKASP  276 (351)
Q Consensus       200 ~~~~~~~~l~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~---~~~~~~~DiwslG~il~~l~~g~~p~~~~~~~~  276 (351)
                        .++.+||+|||+|...............+||+.|||||++.+   .+|+.++|||||||++|||+||..||...+...
T Consensus       167 --~~~~~Ki~DFGla~~~~~~~~~~~~~~~~GT~~ymAPE~l~~~~~~~y~~ksDVwS~Gvvl~Elltg~~Pf~~~~~~~  244 (307)
T 3omv_A          167 --EGLTVKIGDFGLATVKSRWSGSQQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNRD  244 (307)
T ss_dssp             --TTEEEEECCCSSCBC------------CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCHH
T ss_pred             --CCCcEEEeeccCceecccCCcceeecccccCCCccCHHHhhccCCCCCCcHHHhHhHHHHHHHHHHCCCCCCCCChHH
Confidence              778899999999975443333334556789999999999854   468999999999999999999999997543220


Q ss_pred             C------CceeeecCcchhhhhHHHHHHHHHHHHhcCCCCCChHHHHHHHH
Q 018699          277 D------GGLVYLPKLSFKRYWKVELWKSLFTNLLNMSSGNDKEVLQNLQK  321 (351)
Q Consensus       277 ~------~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~~  321 (351)
                      .      .....+.....+..++ +.+.+||.+||+.||++|||+.|++.+
T Consensus       245 ~~~~~~~~~~~~p~~~~~~~~~~-~~l~~li~~cl~~dP~~RPs~~ei~~~  294 (307)
T 3omv_A          245 QIIFMVGRGYASPDLSKLYKNCP-KAMKRLVADCVKKVKEERPLFPQILSS  294 (307)
T ss_dssp             HHHHHHHTTCCCCCSTTSCTTSC-HHHHHHHHHHTCSSSTTSCCHHHHHHH
T ss_pred             HHHHHHhcCCCCCCcccccccch-HHHHHHHHHHcCCCHhHCcCHHHHHHH
Confidence            0      1111112223344455 789999999999999999999999875

>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A*

Probab=100.00  E-value=1.3e-51  Score=367.27  Aligned_cols=251  Identities=18%  Similarity=0.228  Sum_probs=181.7

Q ss_pred             eeEEEEEEeeccCceEEEEEEecCCCCceEEEEecCCCCChH-HHHHHHHHhhhccccccccccceeeecccC-------
Q 018699           48 KKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFPWE-FYMYRQLDQRISGRERSSFGFAHRIHLYSD-------  119 (351)
Q Consensus        48 ~~Y~i~~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~~~e-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------  119 (351)
                      ++|++.+.||+|+||+||+|+ +..+|+.||||++....... .+.+......+....|++++.....+...+       
T Consensus         5 ~dy~~~~~lG~G~fg~V~~a~-~~~~~~~vAiK~i~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~   83 (299)
T 4g31_A            5 TDFEPIQCLGRGGFGVVFEAK-NKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLEKNTTEKLQP   83 (299)
T ss_dssp             HHEEEEEEEEECC--EEEEEE-ETTTCCEEEEEEEEECSSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEEC-------
T ss_pred             hhCEEeeEEecCCCeEEEEEE-ECCCCCEEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEecCccccccc
Confidence            369999999999999999999 57789999999987544322 122222233445667899998887765332       


Q ss_pred             -----eeEEEEEecCCCCHHHHHHHHHhhCCCh---hHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcce
Q 018699          120 -----YSILVCDYLSQGTLQDAINSYVVIGKSM---EEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELT  191 (351)
Q Consensus       120 -----~~~lv~e~~~~~sL~~~l~~~~~~~~~l---~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~  191 (351)
                           ++|+|||||+||+|.+++...    ..+   ++..++.++.||+.||+|||++||+||||||+||+++       
T Consensus        84 ~~~~~~l~ivmE~~~gg~L~~~l~~~----~~~~~~~~~~~~~i~~qi~~al~ylH~~~IiHRDlKp~NILl~-------  152 (299)
T 4g31_A           84 SSPKVYLYIQMQLCRKENLKDWMNGR----CTIEERERSVCLHIFLQIAEAVEFLHSKGLMHRDLKPSNIFFT-------  152 (299)
T ss_dssp             ---CEEEEEEEECCCSCCHHHHHHTC----CSGGGSCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEC-------
T ss_pred             cCCCcEEEEEEecCCCCcHHHHHHhc----CCCChhHHHHHHHHHHHHHHHHHHHHHCcCccccCcHHHeEEC-------
Confidence                 479999999999999999863    333   4466889999999999999999999999999999999       


Q ss_pred             eeccCCCCCcccCCeEEeecCCccccccCCCC----------ccccccccCCCcccceeccCCCCCccchHhHHHHHHHH
Q 018699          192 VLDHDRSGPWQDQGLCLVDWGRGIDLHLFPDN----------MEFEGDCRTSGFRCIEMQEKKPWKFQVDTYGLCAIVHM  261 (351)
Q Consensus       192 ~~~~~~~~~~~~~~~~l~Dfg~a~~~~~~~~~----------~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~  261 (351)
                                .++.+||+|||+|+........          ....+.+||+.|||||++.+..|+.++|||||||++|+
T Consensus       153 ----------~~~~vKl~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilye  222 (299)
T 4g31_A          153 ----------MDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFE  222 (299)
T ss_dssp             ----------TTCCEEECCCCCC--------------------------CCCTTSCHHHHTTCCCCTHHHHHHHHHHHHH
T ss_pred             ----------CCCcEEEccCccceecCCCccccccccccccccccCCcccCccccCHHHHcCCCCCCHHHHHHHHHHHHH
Confidence                      7788999999999754322111          12344679999999999999999999999999999999


Q ss_pred             HHhCccccccccCCCCCceeeecCcchhhhhHH--HHHHHHHHHHhcCCCCCChHHHHHHHHHHH
Q 018699          262 MLHNSYMEIEKKASPDGGLVYLPKLSFKRYWKV--ELWKSLFTNLLNMSSGNDKEVLQNLQKSFQ  324 (351)
Q Consensus       262 l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~li~~~L~~dP~~R~s~~e~l~~~~~  324 (351)
                      |++   ||........ ..........|..+..  +.+.+||.+||++||++|||+.|+++|+|.
T Consensus       223 ll~---Pf~~~~~~~~-~~~~~~~~~~p~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~h~~~  283 (299)
T 4g31_A          223 LLY---PFSTQMERVR-TLTDVRNLKFPPLFTQKYPCEYVMVQDMLSPSPMERPEAINIIENAVF  283 (299)
T ss_dssp             HHS---CCSSHHHHHH-HHHHHHTTCCCHHHHHHCHHHHHHHHHHTCSSGGGSCCHHHHHTSGGG
T ss_pred             Hcc---CCCCccHHHH-HHHHHhcCCCCCCCcccCHHHHHHHHHHcCCChhHCcCHHHHhcCHhh
Confidence            996   6643321100 0000011112222211  567899999999999999999999999864

>4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens}

Probab=100.00  E-value=1.8e-51  Score=379.79  Aligned_cols=255  Identities=19%  Similarity=0.184  Sum_probs=197.0

Q ss_pred             CeeEEEEEEeeccCceEEEEEEecCCCCceEEEEecCCCCChHHHHH--HHHHhhhccccccccccceeeecc------c
Q 018699           47 GKKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFPWEFYMY--RQLDQRISGRERSSFGFAHRIHLY------S  118 (351)
Q Consensus        47 ~~~Y~i~~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~~~e~~~~--~~~~~~~~~~~~~~~~~~~~~~~~------~  118 (351)
                      +++|++.+.||+|+||+||+|+ +..+|+.||||++...........  ......+....|++++.+.+++..      .
T Consensus        53 ~~~Y~~~~~lG~G~fG~V~~a~-~~~t~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~  131 (398)
T 4b99_A           53 GDEYEIIETIGNGAYGVVSSAR-RRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAIKDILRPTVPYGEF  131 (398)
T ss_dssp             CSSEEEEEEEEECSSCEEEEEE-ETTTCCEEEEEEETTTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSSCTTTC
T ss_pred             CCCeEEEEEEecccCeEEEEEE-ECCCCCEEEEEEECccccchHHHHHHHHHHHHHHhcCCCCcceEeeeeecccccccC
Confidence            4689999999999999999999 578899999999976644332211  111223445578888888876542      4


Q ss_pred             CeeEEEEEecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeeccCCC
Q 018699          119 DYSILVCDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRS  198 (351)
Q Consensus       119 ~~~~lv~e~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~~~  198 (351)
                      +.+|+||||| +|+|.+++..    ++.+++..++.++.||+.||.|||++||+||||||+||+++              
T Consensus       132 ~~~~ivmE~~-~g~L~~~i~~----~~~l~~~~~~~~~~qil~al~ylH~~~iiHRDlKP~NIl~~--------------  192 (398)
T 4b99_A          132 KSVYVVLDLM-ESDLHQIIHS----SQPLTLEHVRYFLYQLLRGLKYMHSAQVIHRDLKPSNLLVN--------------  192 (398)
T ss_dssp             CCEEEEEECC-SEEHHHHHTS----SSCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEEC--------------
T ss_pred             CEEEEEEeCC-CCCHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHCcCcCCCcCccccccC--------------
Confidence            6789999999 5689999876    57899999999999999999999999999999999999999              


Q ss_pred             CCcccCCeEEeecCCccccccC--CCCccccccccCCCcccceeccCC-CCCccchHhHHHHHHHHHHhCccccccccCC
Q 018699          199 GPWQDQGLCLVDWGRGIDLHLF--PDNMEFEGDCRTSGFRCIEMQEKK-PWKFQVDTYGLCAIVHMMLHNSYMEIEKKAS  275 (351)
Q Consensus       199 ~~~~~~~~~l~Dfg~a~~~~~~--~~~~~~~~~~g~~~y~aPE~~~~~-~~~~~~DiwslG~il~~l~~g~~p~~~~~~~  275 (351)
                         .++.+||+|||+|......  .......+.+||+.|+|||++.+. .++.++||||+||++|+|++|.+||...+..
T Consensus       193 ---~~~~~Ki~DFGla~~~~~~~~~~~~~~~~~~GT~~Y~APEv~~~~~~~~~~~DiWSlG~il~ell~G~~pF~g~~~~  269 (398)
T 4b99_A          193 ---ENCELKIGDFGMARGLCTSPAEHQYFMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGKNYV  269 (398)
T ss_dssp             ---TTCCEEECCCTTCBCC-------CCCCCSSCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTSCSSCCSSHH
T ss_pred             ---CCCCEEEeecceeeecccCccccccccccceeChHhcCHHHhcCCCCCCChhheehhHHHHHHHHHCCCCCCCCCHH
Confidence               7888999999999754322  123334567899999999998775 5689999999999999999999999654321


Q ss_pred             CCCc----------------------------eeeecCcchhh---hhHHHHHHHHHHHHhcCCCCCChHHHHHHHHHHH
Q 018699          276 PDGG----------------------------LVYLPKLSFKR---YWKVELWKSLFTNLLNMSSGNDKEVLQNLQKSFQ  324 (351)
Q Consensus       276 ~~~~----------------------------~~~~~~~~~~~---~~~~~~~~~li~~~L~~dP~~R~s~~e~l~~~~~  324 (351)
                      ....                            .....+.++..   ..+ +.+.+||.+||.+||++|||+.|+|+|||.
T Consensus       270 ~~l~~I~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s-~~~~dLl~~mL~~dP~~R~ta~e~L~Hp~f  348 (398)
T 4b99_A          270 HQLQLIMMVLGTPSPAVIQAVGAERVRAYIQSLPPRQPVPWETVYPGAD-RQALSLLGRMLRFEPSARISAAAALRHPFL  348 (398)
T ss_dssp             HHHHHHHHHHCCCCGGGTC-----CHHHHHHSSCCCCCCCHHHHSTTCC-HHHHHHHHHHSCSSTTTSCCHHHHTTSGGG
T ss_pred             HHHHHHHHhcCCCChHHhhhhhhhhhhhhhhcCCCcCCCCHHHhCCCCC-HHHHHHHHHHCcCChhHCcCHHHHhcCHhh
Confidence            0000                            00000111111   123 788999999999999999999999999985


Q ss_pred             H
Q 018699          325 D  325 (351)
Q Consensus       325 ~  325 (351)
                      .
T Consensus       349 ~  349 (398)
T 4b99_A          349 A  349 (398)
T ss_dssp             T
T ss_pred             C
Confidence            4

>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A

Probab=100.00  E-value=3.6e-51  Score=393.97  Aligned_cols=251  Identities=16%  Similarity=0.217  Sum_probs=207.5

Q ss_pred             CeeEEEEEEeeccCceEEEEEEecCCCCceEEEEecCCCCC----hH--HHHHHHHHhhhccccccccccceeeecccCe
Q 018699           47 GKKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFP----WE--FYMYRQLDQRISGRERSSFGFAHRIHLYSDY  120 (351)
Q Consensus        47 ~~~Y~i~~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~~----~e--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  120 (351)
                      -++|++.+.||+|+||+||+|+ +..+|+.||||++.+...    .+  ....+.+........|++++.+...+...+.
T Consensus       188 lddf~i~k~LG~G~fG~V~la~-~~~tg~~~AiK~i~K~~i~~~~~~~~~~~E~~~l~ll~~~~HP~IV~l~~~f~~~~~  266 (689)
T 3v5w_A          188 MNDFSVHRIIGRGGFGEVYGCR-KADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDK  266 (689)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEE-ETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHSSSCCTTBCCEEEEEECSSE
T ss_pred             hHHeEEEEEEecccCeEEEEEE-ECCCCCEEEEEEEeHHHcchhhhHHHHHHHHHHHHHHhhCCCCCEeEEEEEEEECCE
Confidence            3689999999999999999999 678899999999864311    11  1112222333445678999999999999999


Q ss_pred             eEEEEEecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeeccCCCCC
Q 018699          121 SILVCDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSGP  200 (351)
Q Consensus       121 ~~lv~e~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~~~~~  200 (351)
                      +|+||||++||+|.+++...    +.+++..++.++.||+.||.|||++||+||||||+|||++                
T Consensus       267 lylVmEy~~GGdL~~~l~~~----~~l~E~~a~~y~~qIl~aL~yLH~~gIiHRDLKPeNILld----------------  326 (689)
T 3v5w_A          267 LSFILDLMNGGDLHYHLSQH----GVFSEADMRFYAAEIILGLEHMHNRFVVYRDLKPANILLD----------------  326 (689)
T ss_dssp             EEEEECCCCSCBHHHHHHHH----CCCCHHHHHHHHHHHHHHHHHHHTTTEECCCCSGGGEEEC----------------
T ss_pred             EEEEEecCCCCcHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHHCCccccCCchHHeEEe----------------
Confidence            99999999999999999874    6899999999999999999999999999999999999999                


Q ss_pred             cccCCeEEeecCCccccccCCCCccccccccCCCcccceecc-CCCCCccchHhHHHHHHHHHHhCccccccccCCCCC-
Q 018699          201 WQDQGLCLVDWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQE-KKPWKFQVDTYGLCAIVHMMLHNSYMEIEKKASPDG-  278 (351)
Q Consensus       201 ~~~~~~~l~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~-~~~~~~~~DiwslG~il~~l~~g~~p~~~~~~~~~~-  278 (351)
                       .+|.+||+|||+|....    .....+.+||+.|+|||++. +..|+.++|||||||++|+|++|.+||......... 
T Consensus       327 -~~G~vKL~DFGlA~~~~----~~~~~t~~GTp~YmAPEvl~~~~~y~~~vDiWSLGvilYEmLtG~~PF~~~~~~~~~~  401 (689)
T 3v5w_A          327 -EHGHVRISDLGLACDFS----KKKPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHE  401 (689)
T ss_dssp             -TTSCEEECCCTTCEECS----SCCCCSCCSCGGGCCHHHHSTTCCCCTHHHHHHHHHHHHHHHHSSCTTCGGGCCCHHH
T ss_pred             -CCCCEEecccceeeecC----CCCCCCccCCcCccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHH
Confidence             78899999999997543    23345678999999999996 467999999999999999999999999865543211 


Q ss_pred             --ceeeecCcchhhhhHHHHHHHHHHHHhcCCCCCChH-----HHHHHHHHHH
Q 018699          279 --GLVYLPKLSFKRYWKVELWKSLFTNLLNMSSGNDKE-----VLQNLQKSFQ  324 (351)
Q Consensus       279 --~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~s-----~~e~l~~~~~  324 (351)
                        .........+|..++ +.+++||.+||.+||.+|++     +.|+++|||.
T Consensus       402 i~~~i~~~~~~~p~~~S-~~a~dLI~~lL~~dP~~Rl~~~~~ga~ei~~HpfF  453 (689)
T 3v5w_A          402 IDRMTLTMAVELPDSFS-PELRSLLEGLLQRDVNRRLGCLGRGAQEVKESPFF  453 (689)
T ss_dssp             HHHHHHHCCCCCCTTSC-HHHHHHHHHHTCSCGGGCTTCSSSTHHHHTTSGGG
T ss_pred             HHHhhcCCCCCCCccCC-HHHHHHHHHHccCCHhHCCCCCCCCHHHHhcCccc
Confidence              112234445666666 89999999999999999998     7999999873

>4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A

Probab=100.00  E-value=1.5e-51  Score=367.76  Aligned_cols=260  Identities=12%  Similarity=0.067  Sum_probs=202.0

Q ss_pred             EEcCeeEEEEEEeeccCceEEEEEEec----CCCCceEEEEecCCCCChH-HHHHHHHHhhhccccccccccceeeeccc
Q 018699           44 EIGGKKYQIKGCAGQGGFAKVFKAYVN----GDPEDVVALKIQKPAFPWE-FYMYRQLDQRISGRERSSFGFAHRIHLYS  118 (351)
Q Consensus        44 ~i~~~~Y~i~~~lg~G~~g~V~~a~~~----~~~~~~vaiK~~~~~~~~e-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  118 (351)
                      ++...++++.++||+|+||+||+|++.    ..+++.||||++....... .+.+...........|++++.+.+++..+
T Consensus        22 ei~~~~~~~~~~lG~G~fG~Vykg~~~~~~~~~~~~~VAvK~l~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~~  101 (308)
T 4gt4_A           22 EISLSAVRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVVCLLGVVTKD  101 (308)
T ss_dssp             BCCGGGEEEEEEEEECSSCEEEEEEEC-------CEEEEEEECCC-CCC-CHHHHHHHHHHHHHCCCTTBCCEEEEECSS
T ss_pred             cCCHHHCeEeeEeccCCCcEEEEEEEcCCccCCCCeEEEEEEECcccChHHHHHHHHHHHHHHhCCCCCCCCcceEEEEC
Confidence            455678999999999999999999862    3467899999987543221 22223333344556899999999999888


Q ss_pred             CeeEEEEEecCCCCHHHHHHHHHh------------hCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeec
Q 018699          119 DYSILVCDYLSQGTLQDAINSYVV------------IGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYA  186 (351)
Q Consensus       119 ~~~~lv~e~~~~~sL~~~l~~~~~------------~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~  186 (351)
                      +.+++|||||++|+|.+++.....            ....+++..+..|+.||+.||.|||+++|+||||||+|||++  
T Consensus       102 ~~~~lV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~iiHRDLK~~NILl~--  179 (308)
T 4gt4_A          102 QPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLSSHHVVHKDLATRNVLVY--  179 (308)
T ss_dssp             SSCEEEEECCSSCBHHHHHHTTCSSCCCC-----CCEECCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEC--
T ss_pred             CEEEEEEEcCCCCcHHHHHHhhCccccccccccccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCCCccccceEEC--
Confidence            999999999999999999975311            123589999999999999999999999999999999999999  


Q ss_pred             CCcceeeccCCCCCcccCCeEEeecCCccccccCCCCccccccccCCCcccceeccCCCCCccchHhHHHHHHHHHHh-C
Q 018699          187 RDELTVLDHDRSGPWQDQGLCLVDWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQEKKPWKFQVDTYGLCAIVHMMLH-N  265 (351)
Q Consensus       187 ~~~~~~~~~~~~~~~~~~~~~l~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~-g  265 (351)
                                     .++.+||+|||+++...............||+.|+|||++.+..|+.++||||+||++|||+| |
T Consensus       180 ---------------~~~~~Ki~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~~s~ksDVwSfGvvl~El~t~g  244 (308)
T 4gt4_A          180 ---------------DKLNVKISDLGLFREVYAADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYG  244 (308)
T ss_dssp             ---------------GGGCEEECCSCCBCGGGGGGCBCSSSSSCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTT
T ss_pred             ---------------CCCCEEECCcccceeccCCCceeEecccccCCcccCHHHHhCCCCCccchhhhHHHHHHHHHhCC
Confidence                           788899999999975443222223345678999999999999999999999999999999998 8


Q ss_pred             ccccccccCCCCCcee-eecCcchhhhhHHHHHHHHHHHHhcCCCCCChHHHHHHHH
Q 018699          266 SYMEIEKKASPDGGLV-YLPKLSFKRYWKVELWKSLFTNLLNMSSGNDKEVLQNLQK  321 (351)
Q Consensus       266 ~~p~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~~  321 (351)
                      ..||...+.......+ .....+.|..++ +.+.+||.+||+.||++|||+.|++.+
T Consensus       245 ~~Pf~~~~~~~~~~~i~~~~~~~~p~~~~-~~~~~li~~C~~~dP~~RPs~~ei~~~  300 (308)
T 4gt4_A          245 LQPYCGYSNQDVVEMIRNRQVLPCPDDCP-AWVYALMIECWNEFPSRRPRFKDIHSR  300 (308)
T ss_dssp             CCTTTTCCHHHHHHHHHTTCCCCCCTTCC-HHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             CCCCCCCCHHHHHHHHHcCCCCCCcccch-HHHHHHHHHHcCCChhHCcCHHHHHHH
Confidence            9999764432100000 112233445555 789999999999999999999998765

>4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A*

Probab=100.00  E-value=1.2e-50  Score=370.23  Aligned_cols=253  Identities=21%  Similarity=0.274  Sum_probs=191.2

Q ss_pred             CeeEEEEEEeeccCceEEEEEEec--CCCCceEEEEecCCCCChHHHHHHHHHhhhccccccccccceeeecccCeeEEE
Q 018699           47 GKKYQIKGCAGQGGFAKVFKAYVN--GDPEDVVALKIQKPAFPWEFYMYRQLDQRISGRERSSFGFAHRIHLYSDYSILV  124 (351)
Q Consensus        47 ~~~Y~i~~~lg~G~~g~V~~a~~~--~~~~~~vaiK~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv  124 (351)
                      .++|++.++||+|+||+||+|+++  ..+++.||+|.+.+... .....+++........|++++.+..++...+.+|+|
T Consensus        20 ~~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~-~~~~~~E~~~l~~~~~h~nIv~l~~~~~~~~~~~lv   98 (361)
T 4f9c_A           20 SNVFKIEDKIGEGTFSSVYLATAQLQVGPEEKIALKHLIPTSH-PIRIAAELQCLTVAGGQDNVMGVKYCFRKNDHVVIA   98 (361)
T ss_dssp             GGTCEEEEEEEECSSEEEEEEEEEBTTSCEEEEEEEEECTTSC-HHHHHHHHHHHHHTCSBTTBCCCSEEEEETTEEEEE
T ss_pred             cCcEEEEEEEecccCcEEEEEEEcccCCCCCEEEEEEEccccC-HHHHHHHHHHHHHhcCCCCCceEEEEEEECCEEEEE
Confidence            367999999999999999999853  34678999998876532 333444443322334688999999999889999999


Q ss_pred             EEecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeeccCCCCCcccC
Q 018699          125 CDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSGPWQDQ  204 (351)
Q Consensus       125 ~e~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~~~~~~~~~  204 (351)
                      |||++|++|.+++.       .+++..++.++.||+.||+|||++||+||||||+||+++.                ..+
T Consensus        99 mE~~~g~~L~~~~~-------~l~~~~~~~~~~qll~al~ylH~~gIiHRDiKPeNiLl~~----------------~~~  155 (361)
T 4f9c_A           99 MPYLEHESFLDILN-------SLSFQEVREYMLNLFKALKRIHQFGIVHRDVKPSNFLYNR----------------RLK  155 (361)
T ss_dssp             EECCCCCCHHHHHT-------TCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEET----------------TTT
T ss_pred             EeCCCcccHHHHHc-------CCCHHHHHHHHHHHHHHHHHHHHCCeEeCcCCHHHeEEeC----------------CCC
Confidence            99999999999873       4889999999999999999999999999999999999983                225


Q ss_pred             CeEEeecCCccccccCC--------------------------CCccccccccCCCcccceeccCC-CCCccchHhHHHH
Q 018699          205 GLCLVDWGRGIDLHLFP--------------------------DNMEFEGDCRTSGFRCIEMQEKK-PWKFQVDTYGLCA  257 (351)
Q Consensus       205 ~~~l~Dfg~a~~~~~~~--------------------------~~~~~~~~~g~~~y~aPE~~~~~-~~~~~~DiwslG~  257 (351)
                      .+||+|||+|+......                          ......+.+||+.|+|||++.+. .|+.++||||+||
T Consensus       156 ~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~y~~~~DiWSlG~  235 (361)
T 4f9c_A          156 KYALVDFGLAQGTHDTKIELLKFVQSEAQQERCSQNKCSICLSRRQQVAPRAGTPGFRAPEVLTKCPNQTTAIDMWSAGV  235 (361)
T ss_dssp             EEEECCCTTCEECTTCSCGGGGGC--------------------------CCCCGGGCCHHHHTTCSCCCTHHHHHHHHH
T ss_pred             eEEECcCCCCcccCCccccccccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCCccchhhhHH
Confidence            79999999996432111                          11123456799999999999775 5889999999999


Q ss_pred             HHHHHHhCccccccccCCCC---------------------Cceee-----------------------ec---------
Q 018699          258 IVHMMLHNSYMEIEKKASPD---------------------GGLVY-----------------------LP---------  284 (351)
Q Consensus       258 il~~l~~g~~p~~~~~~~~~---------------------~~~~~-----------------------~~---------  284 (351)
                      ++|+|++|+.||........                     .....                       .+         
T Consensus       236 il~ell~G~~Pf~~~~~~~~~l~~I~~~~G~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~p~~~~~~~~~  315 (361)
T 4f9c_A          236 IFLSLLSGRYPFYKASDDLTALAQIMTIRGSRETIQAAKTFGKSILCSKEVPAQDLRKLCERLRGMDSSTPKLTSDIQGH  315 (361)
T ss_dssp             HHHHHHHTCSSSSCCSSHHHHHHHHHHHHCHHHHHHHHHHTTEEEEESSCCCCCCHHHHHHHHC----------------
T ss_pred             HHHHHHHCCCCCCCCCCHHHHHHHHHHhcCCccchhhhhhccccccccccCcchhhhHHHHhhccccccccccccccccc
Confidence            99999999999954321100                     00000                       00         


Q ss_pred             --CcchhhhhHHHHHHHHHHHHhcCCCCCChHHHHHHHHHHH
Q 018699          285 --KLSFKRYWKVELWKSLFTNLLNMSSGNDKEVLQNLQKSFQ  324 (351)
Q Consensus       285 --~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~~~~~  324 (351)
                        ........+ +++++||.+||++||.+|+|+.|+|+|||.
T Consensus       316 ~~~~~~~~~is-~~a~DLl~~lL~~dP~~R~ta~eaL~Hp~f  356 (361)
T 4f9c_A          316 ATNLEGWNEVP-DEAYDLLDKLLDLNPASRITAEEALLHPFF  356 (361)
T ss_dssp             ------CTTCC-HHHHHHHHHHTCSCTTTSCCHHHHHTSGGG
T ss_pred             cccccccccCC-HHHHHHHHHHCcCChhHCcCHHHHhcCccc
Confidence              000001122 678999999999999999999999999974

>4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A*

Probab=100.00  E-value=5.9e-51  Score=370.20  Aligned_cols=271  Identities=14%  Similarity=0.125  Sum_probs=208.1

Q ss_pred             eEEEEcCeeEEEEEEeeccCceEEEEEEecC----CCCceEEEEecCCCCChH-HH-HHHHHHhhhccccccccccceee
Q 018699           41 KTIEIGGKKYQIKGCAGQGGFAKVFKAYVNG----DPEDVVALKIQKPAFPWE-FY-MYRQLDQRISGRERSSFGFAHRI  114 (351)
Q Consensus        41 ~~~~i~~~~Y~i~~~lg~G~~g~V~~a~~~~----~~~~~vaiK~~~~~~~~e-~~-~~~~~~~~~~~~~~~~~~~~~~~  114 (351)
                      ..++|..++|++.+.||+|+||+||+|.+..    ..++.||||.+....... .. ..+++.-......|++++.+..+
T Consensus        57 ~~wEi~~~~~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~k~VAvK~l~~~~~~~~~~~~~~E~~il~~l~hhpnIV~l~g~  136 (353)
T 4ase_A           57 SKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGA  136 (353)
T ss_dssp             HHHBCCGGGEEEEEEEEECSSEEEEEEEEETSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEE
T ss_pred             cccEecHHHeEEeeEEecCCCeEEEEEEEcCCCcccCCeEEEEEEEccccChHHHHHHHHHHHHHHHcCCCCcEEEEEEE
Confidence            3467888999999999999999999998632    245789999987654432 11 22222222222345788888887


Q ss_pred             ecc-cCeeEEEEEecCCCCHHHHHHHHHhh------------CCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcE
Q 018699          115 HLY-SDYSILVCDYLSQGTLQDAINSYVVI------------GKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNL  181 (351)
Q Consensus       115 ~~~-~~~~~lv~e~~~~~sL~~~l~~~~~~------------~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Ni  181 (351)
                      +.. ++.+|+|||||++|+|.+++......            ...+++..+..++.||+.||.|||+++|+||||||+||
T Consensus       137 ~~~~~~~~~iV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~yLH~~~iiHRDLK~~NI  216 (353)
T 4ase_A          137 CTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNI  216 (353)
T ss_dssp             ECCTTSCCEEEEECCTTEEHHHHHHHTGGGBCCC-------CTTCBCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGE
T ss_pred             EEecCCEEEEEEEcCCCCCHHHHHHhcccccccccccchhhccccCCHHHHHHHHHHHHHHHHhHhhCCeecCccCccce
Confidence            654 56789999999999999999864311            23588999999999999999999999999999999999


Q ss_pred             EEeecCCcceeeccCCCCCcccCCeEEeecCCccccccCCCCccccccccCCCcccceeccCCCCCccchHhHHHHHHHH
Q 018699          182 LIRYARDELTVLDHDRSGPWQDQGLCLVDWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQEKKPWKFQVDTYGLCAIVHM  261 (351)
Q Consensus       182 ll~~~~~~~~~~~~~~~~~~~~~~~~l~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~  261 (351)
                      +++                 .++.+||+|||+|+...............||+.|||||++.+..|+.++|||||||++||
T Consensus       217 Ll~-----------------~~~~vKi~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~y~~ksDVwS~Gv~l~E  279 (353)
T 4ase_A          217 LLS-----------------EKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWE  279 (353)
T ss_dssp             EEC-----------------GGGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHH
T ss_pred             eeC-----------------CCCCEEECcchhhhhcccCCCceeeccccccccccCHHHHhcCCCCCcccEeehHHHHHH
Confidence            999                 788899999999976543332333445678999999999999999999999999999999


Q ss_pred             HHh-CccccccccCCCC--CceeeecCcchhhhhHHHHHHHHHHHHhcCCCCCChHHHHHHHHHHHHHHhhC
Q 018699          262 MLH-NSYMEIEKKASPD--GGLVYLPKLSFKRYWKVELWKSLFTNLLNMSSGNDKEVLQNLQKSFQDYLCSN  330 (351)
Q Consensus       262 l~~-g~~p~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~~~~~~~~~~~  330 (351)
                      |+| |..||........  .........+.|..++ +.+.+||.+||+.||++|||+.|+++| ++++++++
T Consensus       280 l~t~G~~Pf~~~~~~~~~~~~i~~g~~~~~p~~~~-~~~~~li~~c~~~dP~~RPt~~eil~~-L~~llq~~  349 (353)
T 4ase_A          280 IFSLGASPYPGVKIDEEFCRRLKEGTRMRAPDYTT-PEMYQTMLDCWHGEPSQRPTFSELVEH-LGNLLQAN  349 (353)
T ss_dssp             HTTTSCCSSTTCCCSHHHHHHHHHTCCCCCCTTCC-HHHHHHHHHHTCSSGGGSCCHHHHHHH-HHHHHHHT
T ss_pred             HHhCCCCCCCCCCHHHHHHHHHHcCCCCCCCccCC-HHHHHHHHHHcCcChhHCcCHHHHHHH-HHHHHHHh
Confidence            998 8999976443211  0011122344555566 889999999999999999999999987 44444443

>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens}

Probab=100.00  E-value=4.3e-48  Score=355.89  Aligned_cols=322  Identities=31%  Similarity=0.552  Sum_probs=246.2

Q ss_pred             hHHhhhhhccccccccccccccccccccccccccCCCcceEEEEcCeeEEEEEEeeccCceEEEEEEe----cCCCCceE
Q 018699            2 NKLLKQINSQIMKFEGYHRSNKVYSGKVALSSLNNSSRNKTIEIGGKKYQIKGCAGQGGFAKVFKAYV----NGDPEDVV   77 (351)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~Y~i~~~lg~G~~g~V~~a~~----~~~~~~~v   77 (351)
                      +++|+.+.+|+..+++++.....         .........+.+.+++|++.+.||+|+||+||+|.+    +..+++.|
T Consensus        28 ~~~l~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~v   98 (365)
T 3e7e_A           28 FKLLSGLSKPVSSYPNTFEWQCK---------LPAIKPKTEFQLGSKLVYVHHLLGEGAFAQVYEATQGDLNDAKNKQKF   98 (365)
T ss_dssp             HHHHHTCSSCGGGSTTEEECSSC---------CCCCCSSCEEECSSSEEEEEEEEEECSSEEEEEEEC-------CCCCE
T ss_pred             HHHHhcCCCchhhCCCcccccCc---------ccccccceeEEECCEEEEEEEEeeccCCEEEEEEEecCCcccccCcEE
Confidence            46788888888887777644321         112234567788899999999999999999999952    45678999


Q ss_pred             EEEecCCCCChHHHHHHHHHhhhccccccccccceeeecccCeeEEEEEecCCCCHHHHHHHHHh-hCCChhHHHHHHHH
Q 018699           78 ALKIQKPAFPWEFYMYRQLDQRISGRERSSFGFAHRIHLYSDYSILVCDYLSQGTLQDAINSYVV-IGKSMEEVLCIYYT  156 (351)
Q Consensus        78 aiK~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~-~~~~l~~~~~~~i~  156 (351)
                      |+|++......+......+...+....+++++.....+...+..|+||||+++|+|.+++..... .+..+++..++.++
T Consensus        99 avK~~~~~~~~~~~~e~~~~~~l~~~~~~~iv~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~  178 (365)
T 3e7e_A           99 VLKVQKPANPWEFYIGTQLMERLKPSMQHMFMKFYSAHLFQNGSVLVGELYSYGTLLNAINLYKNTPEKVMPQGLVISFA  178 (365)
T ss_dssp             EEEEESSCCHHHHHHHHHHHHHSCGGGGGGBCCEEEEEECSSCEEEEECCCCSCBHHHHHHHHHTSTTCSCCHHHHHHHH
T ss_pred             EEEEeCCCChhHHHHHHHHHHHhhhhhhhhhhhhheeeecCCCcEEEEeccCCCcHHHHHHHhhcccccCCCHHHHHHHH
Confidence            99999887666666666666666656677888888888888999999999999999999986532 14579999999999


Q ss_pred             HHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeeccCCCCCcccCCeEEeecCCccccccCCCCccccccccCCCcc
Q 018699          157 IEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSGPWQDQGLCLVDWGRGIDLHLFPDNMEFEGDCRTSGFR  236 (351)
Q Consensus       157 ~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~~~~~~~~~~~~l~Dfg~a~~~~~~~~~~~~~~~~g~~~y~  236 (351)
                      .||+.||+|||++||+||||||+||+++.+....      ......++.+||+|||++...............+||+.|+
T Consensus       179 ~qi~~~L~~lH~~~ivHrDiKp~NIll~~~~~~~------~~~~~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~  252 (365)
T 3e7e_A          179 MRMLYMIEQVHDCEIIHGDIKPDNFILGNGFLEQ------DDEDDLSAGLALIDLGQSIDMKLFPKGTIFTAKCETSGFQ  252 (365)
T ss_dssp             HHHHHHHHHHHTTTEECCCCSGGGEEECGGGTCC------------CTTEEECCCTTCEEGGGSCTTEEECCSSCTTSCC
T ss_pred             HHHHHHHHHHhhCCeecCCCCHHHEEecccccCc------cccccccCCEEEeeCchhhhhhccCCCceeeeecCCCCCC
Confidence            9999999999999999999999999998410000      0000126889999999997655555556667778999999


Q ss_pred             cceeccCCCCCccchHhHHHHHHHHHHhCccccccccCCCCCceeeecCcchhhhhHHHHHHHHHHHHhcCCCCCChHHH
Q 018699          237 CIEMQEKKPWKFQVDTYGLCAIVHMMLHNSYMEIEKKASPDGGLVYLPKLSFKRYWKVELWKSLFTNLLNMSSGNDKEVL  316 (351)
Q Consensus       237 aPE~~~~~~~~~~~DiwslG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~  316 (351)
                      |||++.+..++.++|||||||++|+|++|..||......   .+  .....++..+..+.+.+++..||+.+|.+|++..
T Consensus       253 aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~---~~--~~~~~~~~~~~~~~~~~~~~~~l~~~p~~r~~~~  327 (365)
T 3e7e_A          253 CVEMLSNKPWNYQIDYFGVAATVYCMLFGTYMKVKNEGG---EC--KPEGLFRRLPHLDMWNEFFHVMLNIPDCHHLPSL  327 (365)
T ss_dssp             CHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCCCEEEETT---EE--EECSCCTTCSSHHHHHHHHHHHHCCCCTTCCCCH
T ss_pred             ChHHhcCCCCCccccHHHHHHHHHHHHhCCCccccCCCC---ce--eechhccccCcHHHHHHHHHHHcCCCCCCcchHH
Confidence            999999999999999999999999999999999765442   11  1222223333347889999999999999999999


Q ss_pred             HHHHHHHHHHHhhChH-HHHHHHHHHHH
Q 018699          317 QNLQKSFQDYLCSNPQ-LLKNLKELLAK  343 (351)
Q Consensus       317 e~l~~~~~~~~~~~~~-~~~~~~~~~~~  343 (351)
                      +.+++.+++++..+.. ....+..+|..
T Consensus       328 ~~l~~~l~~~l~~~~~~~~~~l~~~l~~  355 (365)
T 3e7e_A          328 DLLRQKLKKVFQQHYTNKIRALRNRLIV  355 (365)
T ss_dssp             HHHHHHHHHHHHHHTTTTHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHhhhhchHHHHHHHHH
Confidence            9999999888876532 23344444444

>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A

Probab=100.00  E-value=5.1e-50  Score=387.06  Aligned_cols=254  Identities=18%  Similarity=0.198  Sum_probs=208.2

Q ss_pred             eeEEEEEEeeccCceEEEEEEecCCCCceEEEEecCCCCChHHHHHHHHHhhhccccccccccceeeecccCeeEEEEEe
Q 018699           48 KKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFPWEFYMYRQLDQRISGRERSSFGFAHRIHLYSDYSILVCDY  127 (351)
Q Consensus        48 ~~Y~i~~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~  127 (351)
                      ++|++.+.||+|+||+||+|+ +..+|+.||+|++......+...+......+....|++++.+..++...+.+|+||||
T Consensus       157 ~~Y~i~~~lG~G~fg~V~~~~-~~~tg~~~AiK~i~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~iv~E~  235 (573)
T 3uto_A          157 DHYDIHEELGTGAFGVVHRVT-ERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEF  235 (573)
T ss_dssp             GTEEEEEEEEEETTEEEEEEE-ETTTCCEEEEEEEECCSHHHHHHHHHHHHHHHHTCCTTBCCEEEEEECSSEEEEEEEC
T ss_pred             cccEEEEEEeeccCeEEEEEE-ECCCCCEEEEEEEeccchhhHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEee
Confidence            589999999999999999999 5788999999998776544433333333444566789999999999999999999999


Q ss_pred             cCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeeccCCCCCcccCCeE
Q 018699          128 LSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSGPWQDQGLC  207 (351)
Q Consensus       128 ~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~~~~~~~~~~~~  207 (351)
                      |+||+|.+++...   ...+++..++.++.||+.||.|||++||+||||||+||+++.+               ..+.+|
T Consensus       236 ~~gg~L~~~i~~~---~~~l~e~~~~~~~~qi~~al~ylH~~~iiHRDlKp~Nill~~~---------------~~~~vK  297 (573)
T 3uto_A          236 MSGGELFEKVADE---HNKMSEDEAVEYMRQVCKGLCHMHENNYVHLDLKPENIMFTTK---------------RSNELK  297 (573)
T ss_dssp             CCCCBHHHHHTCT---TSCEEHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSS---------------SCCCEE
T ss_pred             cCCCcHHHHHHHh---CCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCChhhccccCC---------------CCCCEE
Confidence            9999999998653   4679999999999999999999999999999999999999832               236799


Q ss_pred             EeecCCccccccCCCCccccccccCCCcccceeccCCCCCccchHhHHHHHHHHHHhCccccccccCCCCCcee----ee
Q 018699          208 LVDWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQEKKPWKFQVDTYGLCAIVHMMLHNSYMEIEKKASPDGGLV----YL  283 (351)
Q Consensus       208 l~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~p~~~~~~~~~~~~~----~~  283 (351)
                      |+|||+|....   ........+||+.|+|||++.+..|+.++|||||||++|+|++|.+||...........+    ..
T Consensus       298 l~DFG~a~~~~---~~~~~~~~~GT~~y~APEv~~~~~y~~~~DiWSlGvilyeml~G~~Pf~~~~~~~~~~~i~~~~~~  374 (573)
T 3uto_A          298 LIDFGLTAHLD---PKQSVKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGENDDETLRNVKSCDWN  374 (573)
T ss_dssp             ECCCSSCEECC---TTSEEEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHTTCCC
T ss_pred             EeeccceeEcc---CCCceeeeEECccccCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHHHHHHHhCCCC
Confidence            99999997543   334456678999999999999999999999999999999999999999765432111111    11


Q ss_pred             cCcchhhhhHHHHHHHHHHHHhcCCCCCChHHHHHHHHHHH
Q 018699          284 PKLSFKRYWKVELWKSLFTNLLNMSSGNDKEVLQNLQKSFQ  324 (351)
Q Consensus       284 ~~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~~~~~  324 (351)
                      ........++ +.+++||.+||..||.+||++.|+|+|||.
T Consensus       375 ~~~~~~~~~s-~~~~dli~~~L~~dp~~R~t~~e~l~Hpw~  414 (573)
T 3uto_A          375 MDDSAFSGIS-EDGKDFIRKLLLADPNTRMTIHQALEHPWL  414 (573)
T ss_dssp             CCSGGGTTSC-HHHHHHHHTTSCSSGGGSCCHHHHHHSTTT
T ss_pred             CCcccccCCC-HHHHHHHHHHccCChhHCcCHHHHhcCcCc
Confidence            1222223345 889999999999999999999999999873

>3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*

Probab=100.00  E-value=4.9e-48  Score=345.56  Aligned_cols=248  Identities=15%  Similarity=0.175  Sum_probs=184.7

Q ss_pred             eeEEEEEEeeccCceEEEEEEecCCCCceEEEEecCCCCChHHHHHHHHHhhhccccccccccceeeeccc----CeeEE
Q 018699           48 KKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFPWEFYMYRQLDQRISGRERSSFGFAHRIHLYS----DYSIL  123 (351)
Q Consensus        48 ~~Y~i~~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~l  123 (351)
                      ++|.+.++||+|+||+||+|++   +|+.||||++......+.....++ .......|++++.+..++..+    ..+|+
T Consensus         3 r~i~L~~~iG~G~fG~Vy~~~~---~g~~VAvK~l~~~~~~~~~~e~Ei-~~~~~l~HpNIv~l~g~~~~~~~~~~~~~l   78 (303)
T 3hmm_A            3 RTIVLQESIGKGRFGEVWRGKW---RGEEVAVKIFSSREERSWFREAEI-YQTVMLRHENILGFIAADNKDNGTWTQLWL   78 (303)
T ss_dssp             GGEEEEEEEEECSSSEEEEEEE---TTEEEEEEEECGGGHHHHHHHHHH-HTSTTCCCTTBCCEEEEEEEECSSSEEEEE
T ss_pred             cEEEEEEEEeeCCCeEEEEEEE---CCEEEEEEEECccchhhHHHHHHH-HHHhcCCCCCCCcEEEEEEecCCCceEEEE
Confidence            5799999999999999999995   378999999875432222222222 222345789999888877543    26799


Q ss_pred             EEEecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHC--------CceecCCCCCcEEEeecCCcceeecc
Q 018699          124 VCDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDV--------GIIHGDFKPDNLLIRYARDELTVLDH  195 (351)
Q Consensus       124 v~e~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~--------~i~H~dl~p~Nill~~~~~~~~~~~~  195 (351)
                      ||||+++|+|.+++..     ..+++..+..++.|++.||+|||++        +|+||||||+|||++           
T Consensus        79 V~Ey~~~gsL~~~l~~-----~~l~~~~~~~i~~~ia~gl~ylH~~~~~~~~~~~IiHRDlKp~NILl~-----------  142 (303)
T 3hmm_A           79 VSDYHEHGSLFDYLNR-----YTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVK-----------  142 (303)
T ss_dssp             EEECCTTCBHHHHHHH-----CCBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCCEECSCCCGGGEEEC-----------
T ss_pred             EecCCCCCcHHHHHHh-----CCCCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCEeeccCCcccEEEC-----------
Confidence            9999999999999976     4688999999999999999999987        999999999999999           


Q ss_pred             CCCCCcccCCeEEeecCCccccccCCCC--ccccccccCCCcccceeccCC------CCCccchHhHHHHHHHHHHhCcc
Q 018699          196 DRSGPWQDQGLCLVDWGRGIDLHLFPDN--MEFEGDCRTSGFRCIEMQEKK------PWKFQVDTYGLCAIVHMMLHNSY  267 (351)
Q Consensus       196 ~~~~~~~~~~~~l~Dfg~a~~~~~~~~~--~~~~~~~g~~~y~aPE~~~~~------~~~~~~DiwslG~il~~l~~g~~  267 (351)
                            .++.+||+|||+|+........  ......+||+.|+|||++.+.      .++.++|||||||++|||+||.+
T Consensus       143 ------~~~~~Ki~DFGla~~~~~~~~~~~~~~~~~~GT~~ymAPE~l~~~~~~~~~~~~~k~DVwS~Gvvl~El~tg~~  216 (303)
T 3hmm_A          143 ------KNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCS  216 (303)
T ss_dssp             ------TTSCEEECCCTTCEEEETTTTEESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHHHHHHHHHHHHTBC
T ss_pred             ------CCCCEEEEeCCCCccccCCCCceeeecccccccccccCHHHhcccccccCCccChhHhhhhHHHHHHHHHHCCC
Confidence                  7888999999998754322211  122345799999999999764      35679999999999999999988


Q ss_pred             ccccccCCCCC---------ce--------eeecCcchhhhhH----HHHHHHHHHHHhcCCCCCChHHHHHHHH
Q 018699          268 MEIEKKASPDG---------GL--------VYLPKLSFKRYWK----VELWKSLFTNLLNMSSGNDKEVLQNLQK  321 (351)
Q Consensus       268 p~~~~~~~~~~---------~~--------~~~~~~~~~~~~~----~~~~~~li~~~L~~dP~~R~s~~e~l~~  321 (351)
                      ||.........         ..        .....+.+|..+.    .+.+.+||.+||+.||++|||+.|+++.
T Consensus       217 ~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~rp~~p~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ei~~~  291 (303)
T 3hmm_A          217 IGGIHEDYQLPYYDLVPSDPSVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKT  291 (303)
T ss_dssp             BTTBCCCCCCTTTTTSCSSCCHHHHHHHHTTSCCCCCCCGGGGSSHHHHHHHHHHHTTCCSSGGGSCCHHHHHHH
T ss_pred             CCCccccccccchhcccccchHHHHHHHHhcccCCCCCCccccchHHHHHHHHHHHHHcccCHhHCcCHHHHHHH
Confidence            76543221000         00        0011122332221    1578899999999999999999998764

>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ...

Probab=100.00  E-value=4.7e-47  Score=344.62  Aligned_cols=254  Identities=19%  Similarity=0.227  Sum_probs=204.9

Q ss_pred             cCeeEEEEEEeeccCceEEEEEEecCCCCceEEEEecCCCCC---hHHHHHHHHHhhhccccccccccceeeecccCeeE
Q 018699           46 GGKKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFP---WEFYMYRQLDQRISGRERSSFGFAHRIHLYSDYSI  122 (351)
Q Consensus        46 ~~~~Y~i~~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~~---~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  122 (351)
                      .-++|++.+.||+|+||+||+|+ +..+|+.||+|++.+...   .+..........+....|++++.+...+...+.+|
T Consensus         3 ~~~~y~~~~~lG~G~fg~V~~~~-~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~   81 (337)
T 1o6l_A            3 TMNDFDYLKLLGKGTFGKVILVR-EKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLC   81 (337)
T ss_dssp             CGGGEEEEEEEEECSSEEEEEEE-ETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCCTTBCCEEEEEECSSEEE
T ss_pred             ChHHeEEEEEEecCCCeEEEEEE-ECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhCCCCcCcceEEEEEeCCEEE
Confidence            34689999999999999999999 577899999999864311   11122222223344567889999888888899999


Q ss_pred             EEEEecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeeccCCCCCcc
Q 018699          123 LVCDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSGPWQ  202 (351)
Q Consensus       123 lv~e~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~~~~~~~  202 (351)
                      +||||++||+|.+++..    ...+++..++.++.||+.||.|||++||+||||||+||+++                 .
T Consensus        82 lv~E~~~gg~L~~~l~~----~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~-----------------~  140 (337)
T 1o6l_A           82 FVMEYANGGELFFHLSR----ERVFTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLMLD-----------------K  140 (337)
T ss_dssp             EEEECCTTCBHHHHHHH----HSCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEEC-----------------T
T ss_pred             EEEeCCCCCcHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHCCeecCcCCHHHEEEC-----------------C
Confidence            99999999999999987    36799999999999999999999999999999999999999                 7


Q ss_pred             cCCeEEeecCCccccccCCCCccccccccCCCcccceeccCCCCCccchHhHHHHHHHHHHhCccccccccCCCCCceee
Q 018699          203 DQGLCLVDWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQEKKPWKFQVDTYGLCAIVHMMLHNSYMEIEKKASPDGGLVY  282 (351)
Q Consensus       203 ~~~~~l~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~p~~~~~~~~~~~~~~  282 (351)
                      ++.++|+|||++....  .........+||+.|+|||++.+..++.++|||||||++|+|++|..||...........+.
T Consensus       141 ~g~vkL~DFG~a~~~~--~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~i~  218 (337)
T 1o6l_A          141 DGHIKITDFGLCKEGI--SDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELIL  218 (337)
T ss_dssp             TSCEEECCCTTCBCSC--CTTCCBCCCEECGGGCCGGGGSSSCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHH
T ss_pred             CCCEEEeeccchhhcc--cCCCcccccccChhhCChhhhcCCCCCchhhcccchhHHHHHhcCCCCCCCCCHHHHHHHHH
Confidence            7889999999986422  22333456689999999999999999999999999999999999999997543321111111


Q ss_pred             ecCcchhhhhHHHHHHHHHHHHhcCCCCCCh-----HHHHHHHHHHH
Q 018699          283 LPKLSFKRYWKVELWKSLFTNLLNMSSGNDK-----EVLQNLQKSFQ  324 (351)
Q Consensus       283 ~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~-----s~~e~l~~~~~  324 (351)
                      .....+|..++ +.+.+||.+||..||.+||     ++.|+++|+|.
T Consensus       219 ~~~~~~p~~~s-~~~~~li~~lL~~dP~~R~g~~~~~~~ei~~h~~f  264 (337)
T 1o6l_A          219 MEEIRFPRTLS-PEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRFF  264 (337)
T ss_dssp             HCCCCCCTTSC-HHHHHHHHHHTCSSTTTSTTCSTTTHHHHHTSGGG
T ss_pred             cCCCCCCCCCC-HHHHHHHHHHhhcCHHHhcCCCCCCHHHHHcCCCc
Confidence            22333444555 8899999999999999999     89999999873

>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A

Probab=100.00  E-value=3.4e-47  Score=344.53  Aligned_cols=252  Identities=17%  Similarity=0.175  Sum_probs=204.1

Q ss_pred             eeEEEEEEeeccCceEEEEEEecCCCCceEEEEecCCCCChHH--HHHHHHHhhhccccccccccceeeecccCeeEEEE
Q 018699           48 KKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFPWEF--YMYRQLDQRISGRERSSFGFAHRIHLYSDYSILVC  125 (351)
Q Consensus        48 ~~Y~i~~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~~~e~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~  125 (351)
                      ++|++.+.||+|+||+||+|. +..+|+.||||++........  ..+...........|++++.+..+....+..|+||
T Consensus        15 ~~y~~~~~lG~G~~g~V~~a~-~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~   93 (328)
T 3fe3_A           15 GNYRLLKTIGKGNFAKVKLAR-HILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEVIETEKTLYLIM   93 (328)
T ss_dssp             TTEEEEEEEEECSSEEEEEEE-ETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             CCEEEEEEEeeCCCEEEEEEE-ECCCCCEEEEEEEEhhcCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCEEEEEE
Confidence            579999999999999999999 577899999999876533222  11222223344556889999999888899999999


Q ss_pred             EecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeeccCCCCCcccCC
Q 018699          126 DYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSGPWQDQG  205 (351)
Q Consensus       126 e~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~~~~~~~~~~  205 (351)
                      ||+++++|.+++...    ..+++..++.++.|++.|+.|||++||+||||||+||+++                 .++.
T Consensus        94 e~~~~~~L~~~l~~~----~~l~~~~~~~~~~qi~~al~~lH~~~ivHrDlkp~NIll~-----------------~~~~  152 (328)
T 3fe3_A           94 EYASGGEVFDYLVAH----GRMKEKEARSKFRQIVSAVQYCHQKRIVHRDLKAENLLLD-----------------ADMN  152 (328)
T ss_dssp             CCCTTCBHHHHHHHH----CCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEC-----------------TTSC
T ss_pred             ECCCCCcHHHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHHCCEeccCCCHHHEEEc-----------------CCCC
Confidence            999999999999873    6799999999999999999999999999999999999999                 7788


Q ss_pred             eEEeecCCccccccCCCCccccccccCCCcccceeccCCCCC-ccchHhHHHHHHHHHHhCccccccccCCCCCceeeec
Q 018699          206 LCLVDWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQEKKPWK-FQVDTYGLCAIVHMMLHNSYMEIEKKASPDGGLVYLP  284 (351)
Q Consensus       206 ~~l~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~-~~~DiwslG~il~~l~~g~~p~~~~~~~~~~~~~~~~  284 (351)
                      ++|+|||++....   ........+||+.|+|||++.+..++ .++|||||||++|+|++|..||...............
T Consensus       153 ~kl~DFG~a~~~~---~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~  229 (328)
T 3fe3_A          153 IKIADFGFSNEFT---VGGKLDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRG  229 (328)
T ss_dssp             EEECSTTCCGGGS---SSCGGGTTSSSGGGCCHHHHHTCCCCSHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHC
T ss_pred             EEEeeccCceecC---CCCccccccCCcceeCcccccCCCcCCchhhhhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHhC
Confidence            9999999986433   23345667899999999999888775 8999999999999999999999754432111111122


Q ss_pred             CcchhhhhHHHHHHHHHHHHhcCCCCCChHHHHHHHHHHHH
Q 018699          285 KLSFKRYWKVELWKSLFTNLLNMSSGNDKEVLQNLQKSFQD  325 (351)
Q Consensus       285 ~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~~~~~~  325 (351)
                      ....|...+ +.+.+||.+||..||.+|||+.|+++|||..
T Consensus       230 ~~~~p~~~s-~~~~~li~~~L~~dP~~R~t~~eil~h~~~~  269 (328)
T 3fe3_A          230 KYRIPFYMS-TDCENLLKRFLVLNPIKRGTLEQIMKDRWIN  269 (328)
T ss_dssp             CCCCCTTSC-HHHHHHHHHHCCSSTTTSCCHHHHTTCTTTT
T ss_pred             CCCCCCCCC-HHHHHHHHHHCCCChhHCcCHHHHhcCHhhc
Confidence            233344445 8899999999999999999999999998744

>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens}

Probab=100.00  E-value=1.9e-47  Score=349.44  Aligned_cols=257  Identities=18%  Similarity=0.225  Sum_probs=199.0

Q ss_pred             EEcCeeEEEEEEeeccCceEEEEEEecCCCCceEEEEecCCCCCh---HHHHHHHHHhhhc-cccccccccceeeecccC
Q 018699           44 EIGGKKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFPW---EFYMYRQLDQRIS-GRERSSFGFAHRIHLYSD  119 (351)
Q Consensus        44 ~i~~~~Y~i~~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~~~---e~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~  119 (351)
                      .+..++|++.+.||+|+||+||+|+ +..+++.||||++.+....   ...........+. ...|++++.+...+...+
T Consensus        19 ~~~~~~y~~~~~lG~G~fg~V~~~~-~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~   97 (353)
T 3txo_A           19 RLGIDNFEFIRVLGKGSFGKVMLAR-VKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLFCCFQTPD   97 (353)
T ss_dssp             ----CCEEEEEEEEEETTEEEEEEE-ETTTCCEEEEEEEEHHHHHHHTTHHHHHHHHHHHHHTTTCTTBCCEEEEEECSS
T ss_pred             CCchhheEEEEEEeeCCCEEEEEEE-EcCCCCEEEEEEEEHHHhcchhHHHHHHHHHHHHHhccCCCceeeEEEEEEeCC
Confidence            3556799999999999999999999 5678999999998753211   1111111111122 236888999999888899


Q ss_pred             eeEEEEEecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeeccCCCC
Q 018699          120 YSILVCDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSG  199 (351)
Q Consensus       120 ~~~lv~e~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~~~~  199 (351)
                      .+|+||||++|++|.+++...    ..+++..++.++.||+.||.|||++||+||||||+||+++               
T Consensus        98 ~~~lv~E~~~gg~L~~~l~~~----~~~~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NILl~---------------  158 (353)
T 3txo_A           98 RLFFVMEFVNGGDLMFHIQKS----RRFDEARARFYAAEIISALMFLHDKGIIYRDLKLDNVLLD---------------  158 (353)
T ss_dssp             EEEEEEECCCSCBHHHHHHHH----SSCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEEC---------------
T ss_pred             EEEEEEeCCCCCcHHHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCHHHEEEC---------------
Confidence            999999999999999999873    6799999999999999999999999999999999999999               


Q ss_pred             CcccCCeEEeecCCccccccCCCCccccccccCCCcccceeccCCCCCccchHhHHHHHHHHHHhCccccccccCCCCCc
Q 018699          200 PWQDQGLCLVDWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQEKKPWKFQVDTYGLCAIVHMMLHNSYMEIEKKASPDGG  279 (351)
Q Consensus       200 ~~~~~~~~l~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~p~~~~~~~~~~~  279 (351)
                        .++.++|+|||++....  .........+||+.|+|||++.+..++.++|||||||++|+|++|..||...+......
T Consensus       159 --~~g~ikL~DFG~a~~~~--~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~~~~~  234 (353)
T 3txo_A          159 --HEGHCKLADFGMCKEGI--CNGVTTATFCGTPDYIAPEILQEMLYGPAVDWWAMGVLLYEMLCGHAPFEAENEDDLFE  234 (353)
T ss_dssp             --TTSCEEECCCTTCBCSC--C---------CCGGGCCHHHHHHHHCTTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHH
T ss_pred             --CCCCEEEccccceeecc--cCCccccccCCCcCeEChhhcCCCCcCCccCCCcchHHHHHHHhCCCCCCCCCHHHHHH
Confidence              77889999999986422  22333456689999999999998889999999999999999999999997654331111


Q ss_pred             eeeecCcchhhhhHHHHHHHHHHHHhcCCCCCChHH------HHHHHHHHHH
Q 018699          280 LVYLPKLSFKRYWKVELWKSLFTNLLNMSSGNDKEV------LQNLQKSFQD  325 (351)
Q Consensus       280 ~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~------~e~l~~~~~~  325 (351)
                      .+......+|...+ +.+.+||.+||.+||.+||++      .++++|||..
T Consensus       235 ~i~~~~~~~p~~~~-~~~~~li~~lL~~dP~~R~~~~~~~~~~~il~hp~f~  285 (353)
T 3txo_A          235 AILNDEVVYPTWLH-EDATGILKSFMTKNPTMRLGSLTQGGEHAILRHPFFK  285 (353)
T ss_dssp             HHHHCCCCCCTTSC-HHHHHHHHHHTCSSGGGSTTSGGGTCTHHHHTSGGGT
T ss_pred             HHHcCCCCCCCCCC-HHHHHHHHHHhhhCHHHccCCcccCCHHHHhhCCccc
Confidence            12223334444455 889999999999999999998      8999998743

>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*

Probab=100.00  E-value=7.2e-47  Score=338.01  Aligned_cols=257  Identities=20%  Similarity=0.195  Sum_probs=205.8

Q ss_pred             CeeEEEEEEeeccCceEEEEEEecCCCCceEEEEecCCCCChHHHHHHHHHhhhccccccccccceeeecccCeeEEEEE
Q 018699           47 GKKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFPWEFYMYRQLDQRISGRERSSFGFAHRIHLYSDYSILVCD  126 (351)
Q Consensus        47 ~~~Y~i~~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e  126 (351)
                      .++|++.+.||+|+||+||+|. +..+++.||+|++........+.+...........|++++.+...+..++..|+|||
T Consensus        19 ~~~y~~~~~lg~G~~g~V~~~~-~~~~~~~vaiK~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e   97 (297)
T 3fxz_A           19 KKKYTRFEKIGQGASGTVYTAM-DVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVME   97 (297)
T ss_dssp             GGTBCCCEEEEEETTEEEEEEE-BTTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred             hhceeeeeeeccCCCeEEEEEE-ECCCCcEEEEEEeecccccHHHHHHHHHHHHhcCCCCCCCeEeEEEEECCEEEEEEE
Confidence            4689999999999999999999 678899999999764333222222223333445678899999888888899999999


Q ss_pred             ecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeeccCCCCCcccCCe
Q 018699          127 YLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSGPWQDQGL  206 (351)
Q Consensus       127 ~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~~~~~~~~~~~  206 (351)
                      |+++++|.+++..     ..+++..++.++.|++.|+.|||++||+||||||+||+++                 .++.+
T Consensus        98 ~~~~~~L~~~~~~-----~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~Dlkp~Nil~~-----------------~~~~~  155 (297)
T 3fxz_A           98 YLAGGSLTDVVTE-----TCMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLG-----------------MDGSV  155 (297)
T ss_dssp             CCTTCBHHHHHHH-----SCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEC-----------------TTCCE
T ss_pred             CCCCCCHHHHHhh-----cCCCHHHHHHHHHHHHHHHHHHHhCCceeCCCCHHHEEEC-----------------CCCCE
Confidence            9999999999976     4689999999999999999999999999999999999999                 77889


Q ss_pred             EEeecCCccccccCCCCccccccccCCCcccceeccCCCCCccchHhHHHHHHHHHHhCccccccccCCCCCce---eee
Q 018699          207 CLVDWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQEKKPWKFQVDTYGLCAIVHMMLHNSYMEIEKKASPDGGL---VYL  283 (351)
Q Consensus       207 ~l~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~p~~~~~~~~~~~~---~~~  283 (351)
                      +|+|||++.....  .........||+.|+|||++.+..++.++|||||||++|+|++|..||...........   ...
T Consensus       156 kl~Dfg~~~~~~~--~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~  233 (297)
T 3fxz_A          156 KLTDFGFCAQITP--EQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGT  233 (297)
T ss_dssp             EECCCTTCEECCS--TTCCBCCCCSCGGGCCHHHHHCSCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHHCS
T ss_pred             EEeeCCCceecCC--cccccCCccCCcCccChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCC
Confidence            9999999865432  22334556799999999999999999999999999999999999999975432210000   011


Q ss_pred             cCcchhhhhHHHHHHHHHHHHhcCCCCCChHHHHHHHHHHHHHHhh
Q 018699          284 PKLSFKRYWKVELWKSLFTNLLNMSSGNDKEVLQNLQKSFQDYLCS  329 (351)
Q Consensus       284 ~~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~~~~~~~~~~  329 (351)
                      +....+...+ +.+.+||.+||+.||++||++.|+++|+|......
T Consensus       234 ~~~~~~~~~~-~~~~~li~~~l~~dp~~Rps~~ell~h~~~~~~~~  278 (297)
T 3fxz_A          234 PELQNPEKLS-AIFRDFLNRCLEMDVEKRGSAKELLQHQFLKIAKP  278 (297)
T ss_dssp             CCCSCGGGSC-HHHHHHHHHHSCSSTTTSCCHHHHTTCGGGGGCCC
T ss_pred             CCCCCccccC-HHHHHHHHHHccCChhHCcCHHHHhhChhhcccCc
Confidence            2223344445 78999999999999999999999999997654433

>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus}

Probab=100.00  E-value=8.2e-47  Score=349.39  Aligned_cols=257  Identities=17%  Similarity=0.206  Sum_probs=203.5

Q ss_pred             EEEcCeeEEEEEEeeccCceEEEEEEecCCCCceEEEEecCCCCChHHH----HHHHHHhhhccccccccccceeeeccc
Q 018699           43 IEIGGKKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFPWEFY----MYRQLDQRISGRERSSFGFAHRIHLYS  118 (351)
Q Consensus        43 ~~i~~~~Y~i~~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~~~e~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~  118 (351)
                      ..+..++|++.+.||+|+||+||+|+ +..+++.||+|++.+.......    ...+.........|++++.+...+...
T Consensus        47 ~~~~~~~y~~~~~LG~G~fG~V~~~~-~~~~~~~~AvK~~~k~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~  125 (396)
T 4dc2_A           47 SSLGLQDFDLLRVIGRGSYAKVLLVR-LKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTE  125 (396)
T ss_dssp             --CCGGGEEEEEEEEECSSEEEEEEE-ETTTTEEEEEEEEEGGGTC----CCHHHHHHHHHHHHTTCTTBCCEEEEEECS
T ss_pred             cCCChhHcEEEEEEeeCCCeEEEEEE-ECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhcCCCCCcCeeEEEEEEC
Confidence            34556899999999999999999999 5778899999998754222111    111111111223688899999988889


Q ss_pred             CeeEEEEEecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeeccCCC
Q 018699          119 DYSILVCDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRS  198 (351)
Q Consensus       119 ~~~~lv~e~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~~~  198 (351)
                      +.+|+||||++||+|..++...    ..+++..++.++.||+.||.|||++||+||||||+||+++              
T Consensus       126 ~~~~lV~E~~~gg~L~~~l~~~----~~l~~~~~~~~~~qi~~aL~~LH~~givHrDLKp~NILl~--------------  187 (396)
T 4dc2_A          126 SRLFFVIEYVNGGDLMFHMQRQ----RKLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLLD--------------  187 (396)
T ss_dssp             SEEEEEEECCTTCBHHHHHHHH----SSCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEEC--------------
T ss_pred             CEEEEEEEcCCCCcHHHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHHCCEEeccCCHHHEEEC--------------
Confidence            9999999999999999999873    6799999999999999999999999999999999999999              


Q ss_pred             CCcccCCeEEeecCCccccccCCCCccccccccCCCcccceeccCCCCCccchHhHHHHHHHHHHhCccccccccCCCC-
Q 018699          199 GPWQDQGLCLVDWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQEKKPWKFQVDTYGLCAIVHMMLHNSYMEIEKKASPD-  277 (351)
Q Consensus       199 ~~~~~~~~~l~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~p~~~~~~~~~-  277 (351)
                         .++.+||+|||++....  .........+||+.|+|||++.+..++.++|||||||++|+|++|..||........ 
T Consensus       188 ---~~g~ikL~DFGla~~~~--~~~~~~~~~~gt~~Y~aPE~l~~~~~~~~~DiwslGvllyell~G~~Pf~~~~~~~~~  262 (396)
T 4dc2_A          188 ---SEGHIKLTDYGMCKEGL--RPGDTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNP  262 (396)
T ss_dssp             ---TTSCEEECCCTTCBCCC--CTTCCBCCCCBCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSTTTTC----
T ss_pred             ---CCCCEEEeecceeeecc--cCCCccccccCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccccccc
Confidence               78889999999986422  223345667899999999999999999999999999999999999999964322110 


Q ss_pred             --------CceeeecCcchhhhhHHHHHHHHHHHHhcCCCCCChHH------HHHHHHHHH
Q 018699          278 --------GGLVYLPKLSFKRYWKVELWKSLFTNLLNMSSGNDKEV------LQNLQKSFQ  324 (351)
Q Consensus       278 --------~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~------~e~l~~~~~  324 (351)
                              ...+......+|..++ ..+++||.+||+.||.+||++      .|+++|||.
T Consensus       263 ~~~~~~~~~~~i~~~~~~~p~~~s-~~~~~li~~lL~~dP~~R~~~~~~~~~~ei~~Hpff  322 (396)
T 4dc2_A          263 DQNTEDYLFQVILEKQIRIPRSLS-VKAASVLKSFLNKDPKERLGCHPQTGFADIQGHPFF  322 (396)
T ss_dssp             --CCHHHHHHHHHHCCCCCCTTSC-HHHHHHHHHHTCSCTTTSTTCSTTTHHHHHHHSTTT
T ss_pred             chhhHHHHHHHHhccccCCCCcCC-HHHHHHHHHHhcCCHhHcCCCCCCCCHHHHhcCccc
Confidence                    0111223344555566 889999999999999999985      799999874

>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A*

Probab=100.00  E-value=9.9e-47  Score=343.46  Aligned_cols=256  Identities=18%  Similarity=0.195  Sum_probs=202.2

Q ss_pred             EEcCeeEEEEEEeeccCceEEEEEEecCCCCceEEEEecCCCCC----hHHHHHHHHHhhhccccccccccceeeecccC
Q 018699           44 EIGGKKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFP----WEFYMYRQLDQRISGRERSSFGFAHRIHLYSD  119 (351)
Q Consensus        44 ~i~~~~Y~i~~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~~----~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  119 (351)
                      .+..++|++.+.||+|+||+||+|+ +..+|+.||||++.+...    .......+.........|++++.....+...+
T Consensus        13 ~~~~~~y~~~~~lG~G~fg~V~~~~-~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~iv~l~~~~~~~~   91 (345)
T 1xjd_A           13 KLKIEDFILHKMLGKGSFGKVFLAE-FKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKE   91 (345)
T ss_dssp             ---CTTEEEEEEEEECSSSEEEEEE-ETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTTCTTBCCEEEEEECSS
T ss_pred             CCChHHeEEEEEEeeCCCeEEEEEE-ECCCCCEEEEEEEEhHHhhhhhhHHHHHHHHHHHHhcCCCCCCCcEEEEEEeCC
Confidence            4556899999999999999999999 567899999999864311    11111111111111236888998888888889


Q ss_pred             eeEEEEEecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeeccCCCC
Q 018699          120 YSILVCDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSG  199 (351)
Q Consensus       120 ~~~lv~e~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~~~~  199 (351)
                      .+|+||||++||+|.+++...    ..+++..++.++.||+.||.|||++||+||||||+||+++               
T Consensus        92 ~~~lv~E~~~gg~L~~~l~~~----~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~---------------  152 (345)
T 1xjd_A           92 NLFFVMEYLNGGDLMYHIQSC----HKFDLSRATFYAAEIILGLQFLHSKGIVYRDLKLDNILLD---------------  152 (345)
T ss_dssp             EEEEEEECCTTCBHHHHHHHH----SSCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEEC---------------
T ss_pred             EEEEEEeCCCCCcHHHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCChhhEEEC---------------
Confidence            999999999999999999873    6799999999999999999999999999999999999999               


Q ss_pred             CcccCCeEEeecCCccccccCCCCccccccccCCCcccceeccCCCCCccchHhHHHHHHHHHHhCccccccccCCCCCc
Q 018699          200 PWQDQGLCLVDWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQEKKPWKFQVDTYGLCAIVHMMLHNSYMEIEKKASPDGG  279 (351)
Q Consensus       200 ~~~~~~~~l~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~p~~~~~~~~~~~  279 (351)
                        .++.++|+|||++....  .........+||+.|+|||++.+..++.++|||||||++|+|++|..||...+......
T Consensus       153 --~~g~vkL~DFG~a~~~~--~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~  228 (345)
T 1xjd_A          153 --KDGHIKIADFGMCKENM--LGDAKTNTFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEELFH  228 (345)
T ss_dssp             --TTSCEEECCCTTCBCCC--CTTCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHH
T ss_pred             --CCCCEEEeEChhhhhcc--cCCCcccCCCCCcccCChhhhcCCCCCChhhhHHHHHHHHHHhcCCCCCCCCCHHHHHH
Confidence              77889999999986422  12233456789999999999999999999999999999999999999997544321111


Q ss_pred             eeeecCcchhhhhHHHHHHHHHHHHhcCCCCCChHHH-HHHHHHHH
Q 018699          280 LVYLPKLSFKRYWKVELWKSLFTNLLNMSSGNDKEVL-QNLQKSFQ  324 (351)
Q Consensus       280 ~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~-e~l~~~~~  324 (351)
                      .+......++...+ +.+++||.+||..||++||++. ++++|||.
T Consensus       229 ~i~~~~~~~p~~~s-~~~~~li~~lL~~dp~~R~~~~~~i~~hp~f  273 (345)
T 1xjd_A          229 SIRMDNPFYPRWLE-KEAKDLLVKLFVREPEKRLGVRGDIRQHPLF  273 (345)
T ss_dssp             HHHHCCCCCCTTSC-HHHHHHHHHHSCSSGGGSBTTBSCGGGSGGG
T ss_pred             HHHhCCCCCCcccC-HHHHHHHHHHhcCCHhHcCCChHHHHcCccc
Confidence            11122333444455 8899999999999999999998 88899873

>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A*

Probab=100.00  E-value=2.5e-46  Score=341.85  Aligned_cols=256  Identities=16%  Similarity=0.187  Sum_probs=202.4

Q ss_pred             EEcCeeEEEEEEeeccCceEEEEEEecCCCCceEEEEecCCCCC---hHHHHHHHHHhhhc-cccccccccceeeecccC
Q 018699           44 EIGGKKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFP---WEFYMYRQLDQRIS-GRERSSFGFAHRIHLYSD  119 (351)
Q Consensus        44 ~i~~~~Y~i~~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~~---~e~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~  119 (351)
                      .+..++|++.+.||+|+||+||+|+ +..+++.||||++.+...   ............+. ...|++++.+...+...+
T Consensus        16 ~~~~~~y~~~~~lG~G~fg~V~~~~-~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~   94 (353)
T 2i0e_A           16 RMKLTDFNFLMVLGKGSFGKVMLSE-RKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMD   94 (353)
T ss_dssp             ---CTTEEEEEEEEEETTEEEEEEE-ETTEEEEEEEEEEEHHHHHHTTCHHHHHHHHHHHTCTTCCTTBCCEEEEEECSS
T ss_pred             CCchHHcEEEEEEeeCCCEEEEEEE-ECCCCCEEEEEEEEHHHhhcchHHHHHHHHHHHHHhcCCCCEEeeEEEEEEcCC
Confidence            3455789999999999999999999 567789999999864311   11111111112222 236788888888888889


Q ss_pred             eeEEEEEecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeeccCCCC
Q 018699          120 YSILVCDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSG  199 (351)
Q Consensus       120 ~~~lv~e~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~~~~  199 (351)
                      ..|+||||++||+|.+++...    ..+++..++.++.||+.||.|||++||+||||||+||+++               
T Consensus        95 ~~~lv~E~~~gg~L~~~l~~~----~~~~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIll~---------------  155 (353)
T 2i0e_A           95 RLYFVMEYVNGGDLMYHIQQV----GRFKEPHAVFYAAEIAIGLFFLQSKGIIYRDLKLDNVMLD---------------  155 (353)
T ss_dssp             EEEEEEECCCSCBHHHHHHHH----SSCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEEC---------------
T ss_pred             EEEEEEeCCCCCcHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHHCCEEeccCCHHHEEEc---------------
Confidence            999999999999999999874    6799999999999999999999999999999999999999               


Q ss_pred             CcccCCeEEeecCCccccccCCCCccccccccCCCcccceeccCCCCCccchHhHHHHHHHHHHhCccccccccCCCCCc
Q 018699          200 PWQDQGLCLVDWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQEKKPWKFQVDTYGLCAIVHMMLHNSYMEIEKKASPDGG  279 (351)
Q Consensus       200 ~~~~~~~~l~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~p~~~~~~~~~~~  279 (351)
                        .++.++|+|||++....  .........+||+.|+|||++.+..++.++|||||||++|+|++|..||..........
T Consensus       156 --~~g~vkL~DFG~a~~~~--~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~~~~~  231 (353)
T 2i0e_A          156 --SEGHIKIADFGMCKENI--WDGVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQ  231 (353)
T ss_dssp             --TTSCEEECCCTTCBCCC--CTTCCBCCCCSCGGGCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHH
T ss_pred             --CCCcEEEEeCCcccccc--cCCcccccccCCccccChhhhcCCCcCCcccccchHHHHHHHHcCCCCCCCCCHHHHHH
Confidence              77889999999986422  12333456789999999999999999999999999999999999999997544321111


Q ss_pred             eeeecCcchhhhhHHHHHHHHHHHHhcCCCCCCh-----HHHHHHHHHHH
Q 018699          280 LVYLPKLSFKRYWKVELWKSLFTNLLNMSSGNDK-----EVLQNLQKSFQ  324 (351)
Q Consensus       280 ~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~-----s~~e~l~~~~~  324 (351)
                      .+......+|..++ +.+.+||.+||..||.+||     ++.+++.|+|.
T Consensus       232 ~i~~~~~~~p~~~s-~~~~~li~~lL~~dP~~R~~~~~~~~~~i~~h~~f  280 (353)
T 2i0e_A          232 SIMEHNVAYPKSMS-KEAVAICKGLMTKHPGKRLGCGPEGERDIKEHAFF  280 (353)
T ss_dssp             HHHHCCCCCCTTSC-HHHHHHHHHHTCSCTTSCTTCSTTHHHHHHTSGGG
T ss_pred             HHHhCCCCCCCCCC-HHHHHHHHHHhhcCHHHcCCCCCCCHHHHhcCccc
Confidence            11223334445555 8899999999999999999     57999999874

>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7

Probab=100.00  E-value=3.9e-46  Score=336.13  Aligned_cols=250  Identities=17%  Similarity=0.215  Sum_probs=203.8

Q ss_pred             CeeEEEEEEeeccCceEEEEEEecCCCCceEEEEecCCCCC---hHHHHHHHHHhhhccccccccccceeeecccCeeEE
Q 018699           47 GKKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFP---WEFYMYRQLDQRISGRERSSFGFAHRIHLYSDYSIL  123 (351)
Q Consensus        47 ~~~Y~i~~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~~---~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  123 (351)
                      -++|++.+.||+|+||+||+|+ +..+|+.||+|++.+...   ...+.............|++++.+...+...+..|+
T Consensus         5 ~~~y~~~~~lG~G~~g~V~~~~-~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~l   83 (318)
T 1fot_A            5 LQDFQILRTLGTGSFGRVHLIR-SRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWGTFQDAQQIFM   83 (318)
T ss_dssp             GGGEEEEEEEEECSSCEEEEEE-ETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCBTTBCCEEEEEECSSEEEE
T ss_pred             hHHcEEEEEEeeCCCEEEEEEE-ECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhhCCCCCCceEeEEEEeCCEEEE
Confidence            4689999999999999999999 577899999999864321   111222222333445678899999888888899999


Q ss_pred             EEEecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeeccCCCCCccc
Q 018699          124 VCDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSGPWQD  203 (351)
Q Consensus       124 v~e~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~~~~~~~~  203 (351)
                      ||||++|++|.+++..    ...+++..++.++.||+.||.|||++||+||||||+||+++                 .+
T Consensus        84 v~e~~~gg~L~~~l~~----~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~-----------------~~  142 (318)
T 1fot_A           84 IMDYIEGGELFSLLRK----SQRFPNPVAKFYAAEVCLALEYLHSKDIIYRDLKPENILLD-----------------KN  142 (318)
T ss_dssp             EECCCCSCBHHHHHHH----TSSCCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEEC-----------------TT
T ss_pred             EEeCCCCCCHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCChheEEEc-----------------CC
Confidence            9999999999999987    46899999999999999999999999999999999999999                 77


Q ss_pred             CCeEEeecCCccccccCCCCccccccccCCCcccceeccCCCCCccchHhHHHHHHHHHHhCccccccccCCCCCceeee
Q 018699          204 QGLCLVDWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQEKKPWKFQVDTYGLCAIVHMMLHNSYMEIEKKASPDGGLVYL  283 (351)
Q Consensus       204 ~~~~l~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~p~~~~~~~~~~~~~~~  283 (351)
                      +.++|+|||++....     ......+||+.|+|||++.+..++.++|||||||++|+|++|..||...........+..
T Consensus       143 g~~kL~Dfg~a~~~~-----~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~  217 (318)
T 1fot_A          143 GHIKITDFGFAKYVP-----DVTYTLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDSNTMKTYEKILN  217 (318)
T ss_dssp             SCEEECCCSSCEECS-----SCBCCCCSCTTTCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHH
T ss_pred             CCEEEeecCcceecC-----CccccccCCccccCHhHhcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHh
Confidence            889999999986532     123456799999999999999999999999999999999999999975443211111122


Q ss_pred             cCcchhhhhHHHHHHHHHHHHhcCCCCCCh-----HHHHHHHHHHH
Q 018699          284 PKLSFKRYWKVELWKSLFTNLLNMSSGNDK-----EVLQNLQKSFQ  324 (351)
Q Consensus       284 ~~~~~~~~~~~~~~~~li~~~L~~dP~~R~-----s~~e~l~~~~~  324 (351)
                      ....+|..++ +.+.+||.+||..||.+|+     ++.+++.|||.
T Consensus       218 ~~~~~p~~~~-~~~~~li~~lL~~dp~~R~~~~~~~~~~i~~hp~f  262 (318)
T 1fot_A          218 AELRFPPFFN-EDVKDLLSRLITRDLSQRLGNLQNGTEDVKNHPWF  262 (318)
T ss_dssp             CCCCCCTTSC-HHHHHHHHHHTCSCTTTCTTSSTTTTHHHHTSGGG
T ss_pred             CCCCCCCCCC-HHHHHHHHHHhccCHHHcCCCcCCCHHHHhcCccc
Confidence            2333444555 8899999999999999999     89999999874

>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe}

Probab=100.00  E-value=5.3e-46  Score=337.45  Aligned_cols=251  Identities=18%  Similarity=0.188  Sum_probs=204.6

Q ss_pred             eeEEEEEEeeccCceEEEEEEecCCCCceEEEEecCCCCChH---HHHHHHHHhhhccccccccccceeeecccCeeEEE
Q 018699           48 KKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFPWE---FYMYRQLDQRISGRERSSFGFAHRIHLYSDYSILV  124 (351)
Q Consensus        48 ~~Y~i~~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~~~e---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv  124 (351)
                      ++|++.+.||+|+||+||+|. +..+++.||+|++.+.....   ...+...........|++++.+..++..++..++|
T Consensus         9 ~~Y~i~~~lG~G~~g~V~~a~-~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv   87 (336)
T 3h4j_B            9 GPYIIRETLGEGSFGKVKLAT-HYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHIIKLYDVITTPTDIVMV   87 (336)
T ss_dssp             TTEEEEEEEEEETTEEEEEEE-ETTTCCEEEEEEEEHHHHHHTTCSHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred             CCEEEEEEEecCCCeEEEEEE-ECCCCCEEEEEEEehHHccchhHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEE
Confidence            589999999999999999999 57888999999976431111   11122222333455688999999988889999999


Q ss_pred             EEecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeeccCCCCCcccC
Q 018699          125 CDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSGPWQDQ  204 (351)
Q Consensus       125 ~e~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~~~~~~~~~  204 (351)
                      |||+ +|+|.+++...    ..+++..++.++.|++.|+.|||++||+||||||+||+++                 .++
T Consensus        88 ~E~~-~g~l~~~l~~~----~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dlkp~NIll~-----------------~~~  145 (336)
T 3h4j_B           88 IEYA-GGELFDYIVEK----KRMTEDEGRRFFQQIICAIEYCHRHKIVHRDLKPENLLLD-----------------DNL  145 (336)
T ss_dssp             ECCC-CEEHHHHHHHH----CSCCHHHHHHHHHHHHHHHHHHHHHTCCCCCCSTTTEEEC-----------------TTC
T ss_pred             EECC-CCcHHHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCchhhEEEc-----------------CCC
Confidence            9999 78999988773    6799999999999999999999999999999999999999                 778


Q ss_pred             CeEEeecCCccccccCCCCccccccccCCCcccceeccCCCC-CccchHhHHHHHHHHHHhCccccccccCCCCCceeee
Q 018699          205 GLCLVDWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQEKKPW-KFQVDTYGLCAIVHMMLHNSYMEIEKKASPDGGLVYL  283 (351)
Q Consensus       205 ~~~l~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~-~~~~DiwslG~il~~l~~g~~p~~~~~~~~~~~~~~~  283 (351)
                      .++|+|||++....   ........+||+.|+|||++.+..+ +.++|||||||++|+|++|..||..............
T Consensus       146 ~~kl~DFG~s~~~~---~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~~~~~~~i~~  222 (336)
T 3h4j_B          146 NVKIADFGLSNIMT---DGNFLKTSCGSPNYAAPEVINGKLYAGPEVDVWSCGIVLYVMLVGRLPFDDEFIPNLFKKVNS  222 (336)
T ss_dssp             CEEECCSSCTBTTT---TSBTTCCCTTSTTTSCGGGSCCSGGGCHHHHHHHHHHHHHHHHHSSCSSBCSSSTTCBCCCCS
T ss_pred             CEEEEEeccceecc---CCcccccccCCcCcCCHHHHcCCCCCCCccchhHHHHHHHHHHhCCCCCCCccHHHHHHHHHc
Confidence            89999999986432   2334456689999999999988776 6899999999999999999999987654433333333


Q ss_pred             cCcchhhhhHHHHHHHHHHHHhcCCCCCChHHHHHHHHHHHH
Q 018699          284 PKLSFKRYWKVELWKSLFTNLLNMSSGNDKEVLQNLQKSFQD  325 (351)
Q Consensus       284 ~~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~~~~~~  325 (351)
                      .....|..++ +.+.+||.+||..||.+|||+.|+++|||..
T Consensus       223 ~~~~~p~~~s-~~~~~li~~~L~~dP~~Rpt~~eil~hp~~~  263 (336)
T 3h4j_B          223 CVYVMPDFLS-PGAQSLIRRMIVADPMQRITIQEIRRDPWFN  263 (336)
T ss_dssp             SCCCCCTTSC-HHHHHHHHTTSCSSGGGSCCHHHHTTCHHHH
T ss_pred             CCCCCcccCC-HHHHHHHHHHcCCChhHCcCHHHHHhChhhc
Confidence            3444555566 8899999999999999999999999999854

>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A*

Probab=100.00  E-value=7.6e-46  Score=339.66  Aligned_cols=257  Identities=19%  Similarity=0.183  Sum_probs=202.5

Q ss_pred             CeeEEEEEEeeccCceEEEEEEecCCCCceEEEEecCCCCCh------HHHHHHHHHhhhccccccccccceeeecccCe
Q 018699           47 GKKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFPW------EFYMYRQLDQRISGRERSSFGFAHRIHLYSDY  120 (351)
Q Consensus        47 ~~~Y~i~~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~~~------e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  120 (351)
                      .++|++.+.||+|+||+||+|+ +..+|+.||+|++.+....      ..+.+......+....|++++.+..++...+.
T Consensus        11 ~~~y~~~~~LG~G~fg~V~~~~-~~~~~~~~avK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~   89 (361)
T 2yab_A           11 EDFYDIGEELGSGQFAIVKKCR-EKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHPNIITLHDVYENRTD   89 (361)
T ss_dssp             GGTEEEEEEEEEETTEEEEEEE-ETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSE
T ss_pred             hhceEEeeEEeeCcCEEEEEEE-ECCCCCEEEEEEEEccccccccchhHHHHHHHHHHHHHhCCCcCCCcEEEEEEeCCE
Confidence            4679999999999999999999 5778999999998754321      11222222333445568899999999888999


Q ss_pred             eEEEEEecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeeccCCCCC
Q 018699          121 SILVCDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSGP  200 (351)
Q Consensus       121 ~~lv~e~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~~~~~  200 (351)
                      .|+||||++|++|.+++..    ...+++..++.++.||+.||.|||++||+|+||||+||+++.++.            
T Consensus        90 ~~lv~e~~~gg~L~~~l~~----~~~l~~~~~~~i~~qi~~aL~~LH~~givHrDlkp~NIll~~~~~------------  153 (361)
T 2yab_A           90 VVLILELVSGGELFDFLAQ----KESLSEEEATSFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNI------------  153 (361)
T ss_dssp             EEEEEECCCSCBHHHHHTT----CSCCBHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESCTTS------------
T ss_pred             EEEEEEcCCCCcHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEeCCCC------------
Confidence            9999999999999999976    568999999999999999999999999999999999999983321            


Q ss_pred             cccCCeEEeecCCccccccCCCCccccccccCCCcccceeccCCCCCccchHhHHHHHHHHHHhCccccccccCCCCCce
Q 018699          201 WQDQGLCLVDWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQEKKPWKFQVDTYGLCAIVHMMLHNSYMEIEKKASPDGGL  280 (351)
Q Consensus       201 ~~~~~~~l~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~p~~~~~~~~~~~~  280 (351)
                       ....++|+|||++....   ........+||+.|+|||++.+..++.++|||||||++|+|++|..||...........
T Consensus       154 -~~~~vkl~DFG~a~~~~---~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~Pf~~~~~~~~~~~  229 (361)
T 2yab_A          154 -PIPHIKLIDFGLAHEIE---DGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLAN  229 (361)
T ss_dssp             -SSCCEEECCCSSCEECC---TTCCCCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHH
T ss_pred             -CccCEEEEecCCceEcC---CCCccccCCCCccEECchHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCHHHHHHH
Confidence             12369999999986543   22334556799999999999999999999999999999999999999975432211000


Q ss_pred             eeec----CcchhhhhHHHHHHHHHHHHhcCCCCCChHHHHHHHHHHHH
Q 018699          281 VYLP----KLSFKRYWKVELWKSLFTNLLNMSSGNDKEVLQNLQKSFQD  325 (351)
Q Consensus       281 ~~~~----~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~~~~~~  325 (351)
                      +...    ........+ +.+++||.+||.+||.+|||+.|+++|||..
T Consensus       230 i~~~~~~~~~~~~~~~s-~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~  277 (361)
T 2yab_A          230 ITAVSYDFDEEFFSQTS-ELAKDFIRKLLVKETRKRLTIQEALRHPWIT  277 (361)
T ss_dssp             HHTTCCCCCHHHHTTSC-HHHHHHHHHHSCSSTTTSCCHHHHHTSTTTS
T ss_pred             HHhcCCCCCchhccCCC-HHHHHHHHHHCCCChhHCcCHHHHhcCcCcC
Confidence            0011    111122233 7899999999999999999999999999743

>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A*

Probab=100.00  E-value=7.8e-46  Score=337.89  Aligned_cols=254  Identities=18%  Similarity=0.214  Sum_probs=202.1

Q ss_pred             cCeeEEEEEEeeccCceEEEEEEecCCCCceEEEEecCCCCChHH---HHHHHHHhhhc-cccccccccceeeecccCee
Q 018699           46 GGKKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFPWEF---YMYRQLDQRIS-GRERSSFGFAHRIHLYSDYS  121 (351)
Q Consensus        46 ~~~~Y~i~~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~~~e~---~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~  121 (351)
                      ..++|++.+.||+|+||.||+|+ +..+++.||+|++.+......   ........... ...|++++.+...+...+.+
T Consensus         7 ~~~~y~~~~~lG~G~fg~V~~~~-~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~   85 (345)
T 3a8x_A            7 GLQDFDLLRVIGRGSYAKVLLVR-LKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRL   85 (345)
T ss_dssp             CGGGEEEEEEEEECSSEEEEEEE-ETTTTEEEEEEEEEGGGSCSHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEE
T ss_pred             chhheEEEEEEEecCCeEEEEEE-ECCCCCEEEEEEEEhHHhcchHHHHHHHHHHHHHHhcCCCCccCeEEEEEEeCCEE
Confidence            34689999999999999999999 577889999999876532221   11111122222 23688999999888888999


Q ss_pred             EEEEEecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeeccCCCCCc
Q 018699          122 ILVCDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSGPW  201 (351)
Q Consensus       122 ~lv~e~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~~~~~~  201 (351)
                      |+||||+++++|.+++...    ..+++..++.++.||+.||.|||++||+||||||+||+++                 
T Consensus        86 ~lv~e~~~gg~L~~~l~~~----~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~-----------------  144 (345)
T 3a8x_A           86 FFVIEYVNGGDLMFHMQRQ----RKLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLLD-----------------  144 (345)
T ss_dssp             EEEECCCCSCBHHHHHHHH----SSCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEEC-----------------
T ss_pred             EEEEeCCCCCcHHHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCHHHEEEC-----------------
Confidence            9999999999999999873    6799999999999999999999999999999999999999                 


Q ss_pred             ccCCeEEeecCCccccccCCCCccccccccCCCcccceeccCCCCCccchHhHHHHHHHHHHhCccccccccCCCC----
Q 018699          202 QDQGLCLVDWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQEKKPWKFQVDTYGLCAIVHMMLHNSYMEIEKKASPD----  277 (351)
Q Consensus       202 ~~~~~~l~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~p~~~~~~~~~----  277 (351)
                      .++.++|+|||++....  .........+||+.|+|||++.+..++.++|||||||++|+|++|..||........    
T Consensus       145 ~~g~~kL~DFG~a~~~~--~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~  222 (345)
T 3a8x_A          145 SEGHIKLTDYGMCKEGL--RPGDTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQN  222 (345)
T ss_dssp             TTSCEEECCGGGCBCSC--CTTCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTTTC-------
T ss_pred             CCCCEEEEecccccccc--CCCCcccccCCCccccCccccCCCCCChHHhHHHHHHHHHHHHhCCCCcCCcccccccccc
Confidence            77889999999986422  123334566899999999999999999999999999999999999999964221100    


Q ss_pred             -----CceeeecCcchhhhhHHHHHHHHHHHHhcCCCCCChHH------HHHHHHHHH
Q 018699          278 -----GGLVYLPKLSFKRYWKVELWKSLFTNLLNMSSGNDKEV------LQNLQKSFQ  324 (351)
Q Consensus       278 -----~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~------~e~l~~~~~  324 (351)
                           ...+......+|...+ ..+++||.+||+.||.+||++      .+++.|||.
T Consensus       223 ~~~~~~~~i~~~~~~~p~~~s-~~~~~li~~lL~~dP~~R~~~~~~~~~~~i~~hp~f  279 (345)
T 3a8x_A          223 TEDYLFQVILEKQIRIPRSLS-VKAASVLKSFLNKDPKERLGCHPQTGFADIQGHPFF  279 (345)
T ss_dssp             CHHHHHHHHHHCCCCCCTTSC-HHHHHHHHHHTCSSTTTSTTCCTTTHHHHHHTSGGG
T ss_pred             cHHHHHHHHHcCCCCCCCCCC-HHHHHHHHHHhcCCHhHCCCCCCcCCHHHHhcCCcc
Confidence                 0001122334445555 889999999999999999985      799999874

>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A

Probab=100.00  E-value=6.9e-45  Score=332.69  Aligned_cols=262  Identities=19%  Similarity=0.186  Sum_probs=201.9

Q ss_pred             CeeEEEEEEeeccCceEEEEEEecCCCCceEEEEecCCCC-----ChHHHHHHHHHhhhccccccccccceeeecccCee
Q 018699           47 GKKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAF-----PWEFYMYRQLDQRISGRERSSFGFAHRIHLYSDYS  121 (351)
Q Consensus        47 ~~~Y~i~~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~-----~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  121 (351)
                      .++|++.+.||+|+||+||+|. +..+++.||||++....     ......+...........|++++.+..++...+..
T Consensus        23 ~~~y~~~~~lG~G~~g~V~~~~-~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~  101 (351)
T 3c0i_A           23 EDVYELCEVIGKGPFSVVRRCI-NRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVELLETYSSDGML  101 (351)
T ss_dssp             HHHEEEEEEEEECSSEEEEEEE-ETTTCCEEEEEEEEHHHHHTSSSCCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEE
T ss_pred             ccceEEeeEEeeCCCEEEEEEE-ECCCCCEEEEEEEEhhhccccccchHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEE
Confidence            4789999999999999999999 57788999999975311     11112222222333445688999999988889999


Q ss_pred             EEEEEecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeeccCCCCCc
Q 018699          122 ILVCDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSGPW  201 (351)
Q Consensus       122 ~lv~e~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~~~~~~  201 (351)
                      |+||||+++++|.+.+......+..+++..++.++.||+.||.|||++||+||||||+||+++.++              
T Consensus       102 ~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~ivHrDlkp~NIl~~~~~--------------  167 (351)
T 3c0i_A          102 YMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCHDNNIIHRDVKPHCVLLASKE--------------  167 (351)
T ss_dssp             EEEEECCSSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECSSS--------------
T ss_pred             EEEEeCCCCCCHHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCChHHeEEecCC--------------
Confidence            999999999999998877654456789999999999999999999999999999999999998432              


Q ss_pred             ccCCeEEeecCCccccccCCCCccccccccCCCcccceeccCCCCCccchHhHHHHHHHHHHhCccccccccCCCCCcee
Q 018699          202 QDQGLCLVDWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQEKKPWKFQVDTYGLCAIVHMMLHNSYMEIEKKASPDGGLV  281 (351)
Q Consensus       202 ~~~~~~l~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~p~~~~~~~~~~~~~  281 (351)
                      ....++|+|||++.....  .........||+.|+|||++.+..++.++|||||||++|+|++|..||............
T Consensus       168 ~~~~vkl~Dfg~a~~~~~--~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~i~  245 (351)
T 3c0i_A          168 NSAPVKLGGFGVAIQLGE--SGLVAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPFYGTKERLFEGII  245 (351)
T ss_dssp             TTCCEEECCCTTCEECCT--TSCBCCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCSSHHHHHHHHH
T ss_pred             CCCcEEEecCcceeEecC--CCeeecCCcCCcCccCHHHHcCCCCCchHhhHHHHHHHHHHHHCCCCCCCcHHHHHHHHH
Confidence            234599999999865432  122234567999999999999989999999999999999999999999754321000000


Q ss_pred             e---ecCcchhhhhHHHHHHHHHHHHhcCCCCCChHHHHHHHHHHHHH
Q 018699          282 Y---LPKLSFKRYWKVELWKSLFTNLLNMSSGNDKEVLQNLQKSFQDY  326 (351)
Q Consensus       282 ~---~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~~~~~~~  326 (351)
                      .   ..........+ +.+++||.+||..||++||++.|+++|+|...
T Consensus       246 ~~~~~~~~~~~~~~s-~~~~~li~~~L~~dP~~R~s~~e~l~hp~~~~  292 (351)
T 3c0i_A          246 KGKYKMNPRQWSHIS-ESAKDLVRRMLMLDPAERITVYEALNHPWLKE  292 (351)
T ss_dssp             HTCCCCCHHHHTTSC-HHHHHHHHHHTCSSTTTSCCHHHHHTSHHHHT
T ss_pred             cCCCCCCccccccCC-HHHHHHHHHHCCCChhHCcCHHHHhcChhhcC
Confidence            0   00111111223 78999999999999999999999999998553

>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A*

Probab=100.00  E-value=6.4e-46  Score=341.49  Aligned_cols=254  Identities=19%  Similarity=0.221  Sum_probs=201.3

Q ss_pred             cCeeEEEEEEeeccCceEEEEEEecCCCCceEEEEecCCCCChHH----HHHHHHHhhhccccccccccceeeecccCee
Q 018699           46 GGKKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFPWEF----YMYRQLDQRISGRERSSFGFAHRIHLYSDYS  121 (351)
Q Consensus        46 ~~~~Y~i~~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~~~e~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  121 (351)
                      ..++|++.+.||+|+||+||+|+ +..+++.||||++.+......    ..+.+.........|++++.+...+...+.+
T Consensus        36 ~~~~y~~~~~lG~G~fg~V~~~~-~~~~~~~~AiK~~~~~~~~~~~~~~~~~~e~~~ll~~~~hp~Iv~l~~~~~~~~~~  114 (373)
T 2r5t_A           36 KPSDFHFLKVIGKGSFGKVLLAR-HKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKL  114 (373)
T ss_dssp             CGGGEEEEEEEECCTTCEEEEEE-ETTTCCEEEEEEEEGGGBC-------------CCBCCCCCTTBCCEEEEEECSSEE
T ss_pred             ChhheEEEEEEeeCCCeEEEEEE-EcCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHHhCCCCCCCCEEEEEEeCCEE
Confidence            35789999999999999999999 577889999999875432211    1111111113456788899888888889999


Q ss_pred             EEEEEecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeeccCCCCCc
Q 018699          122 ILVCDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSGPW  201 (351)
Q Consensus       122 ~lv~e~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~~~~~~  201 (351)
                      |+||||++||+|.+++...    ..+++..++.++.||+.||.|||++||+||||||+||+++                 
T Consensus       115 ~lv~E~~~gg~L~~~l~~~----~~~~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIll~-----------------  173 (373)
T 2r5t_A          115 YFVLDYINGGELFYHLQRE----RCFLEPRARFYAAEIASALGYLHSLNIVYRDLKPENILLD-----------------  173 (373)
T ss_dssp             EEEEECCCSCBHHHHHHHH----SSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEC-----------------
T ss_pred             EEEEeCCCCCcHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCHHHEEEC-----------------
Confidence            9999999999999999873    6789999999999999999999999999999999999999                 


Q ss_pred             ccCCeEEeecCCccccccCCCCccccccccCCCcccceeccCCCCCccchHhHHHHHHHHHHhCccccccccCCCCCcee
Q 018699          202 QDQGLCLVDWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQEKKPWKFQVDTYGLCAIVHMMLHNSYMEIEKKASPDGGLV  281 (351)
Q Consensus       202 ~~~~~~l~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~p~~~~~~~~~~~~~  281 (351)
                      .++.++|+|||++....  .........+||+.|+|||++.+..++.++|||||||++|+|++|..||...+.......+
T Consensus       174 ~~g~ikL~DFG~a~~~~--~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~~~~~~i  251 (373)
T 2r5t_A          174 SQGHIVLTDFGLCKENI--EHNSTTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTAEMYDNI  251 (373)
T ss_dssp             TTSCEEECCCCBCGGGB--CCCCCCCSBSCCCCCCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSBHHHHHHHH
T ss_pred             CCCCEEEeeCccccccc--cCCCccccccCCccccCHHHhCCCCCCchhhhHHHHHHHHHHHcCCCCCCCCCHHHHHHHH
Confidence            77889999999986422  2233445678999999999999999999999999999999999999999754432111111


Q ss_pred             eecCcchhhhhHHHHHHHHHHHHhcCCCCCChHH----HHHHHHHHH
Q 018699          282 YLPKLSFKRYWKVELWKSLFTNLLNMSSGNDKEV----LQNLQKSFQ  324 (351)
Q Consensus       282 ~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~----~e~l~~~~~  324 (351)
                      ......++..++ ..+++||.+||..||.+||++    .+++.|+|.
T Consensus       252 ~~~~~~~~~~~~-~~~~~li~~lL~~dp~~R~~~~~~~~~i~~h~~f  297 (373)
T 2r5t_A          252 LNKPLQLKPNIT-NSARHLLEGLLQKDRTKRLGAKDDFMEIKSHVFF  297 (373)
T ss_dssp             HHSCCCCCSSSC-HHHHHHHHHHTCSSGGGSTTTTTTHHHHHTSGGG
T ss_pred             HhcccCCCCCCC-HHHHHHHHHHcccCHHhCCCCCCCHHHHhCCccc
Confidence            122233334445 789999999999999999987    578888863

>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens}

Probab=100.00  E-value=6.8e-45  Score=341.77  Aligned_cols=257  Identities=16%  Similarity=0.152  Sum_probs=202.7

Q ss_pred             CeeEEEEEEeeccCceEEEEEEecCCCCceEEEEecCCCCChHH--HHHHHHHhhhccccccccccceeeecccCeeEEE
Q 018699           47 GKKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFPWEF--YMYRQLDQRISGRERSSFGFAHRIHLYSDYSILV  124 (351)
Q Consensus        47 ~~~Y~i~~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~~~e~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv  124 (351)
                      .++|++.+.||+|+||+||+|. +..+|+.||+|++........  ..+...........|++++.+..++..++..|+|
T Consensus        10 ~~~Y~i~~~LG~G~fg~V~~~~-~~~~~~~~a~K~i~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lv   88 (444)
T 3soa_A           10 TEEYQLFEELGKGAFSVVRRCV-KVLAGQEYAAMIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDSISEEGHHYLI   88 (444)
T ss_dssp             HHHEEEEEEEEEC--CEEEEEE-ETTTTEEEEEEEEESCSCHHHHHHHHHHHHHHHHHCCBTTBCCEEEEEECSSEEEEE
T ss_pred             cCCeEEEEEeccCCCeEEEEEE-ECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCcCCCeEEEEEEECCEEEEE
Confidence            4689999999999999999999 578899999999876544322  2222223334455789999999999889999999


Q ss_pred             EEecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeeccCCCCCcccC
Q 018699          125 CDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSGPWQDQ  204 (351)
Q Consensus       125 ~e~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~~~~~~~~~  204 (351)
                      |||+.||+|.+.+..    ...+++..+..++.||+.||.|||++||+||||||+||+++...              .++
T Consensus        89 ~E~~~gg~L~~~i~~----~~~~~e~~~~~i~~qil~aL~~lH~~givHrDlKp~NIll~~~~--------------~~~  150 (444)
T 3soa_A           89 FDLVTGGELFEDIVA----REYYSEADASHCIQQILEAVLHCHQMGVVHRNLKPENLLLASKL--------------KGA  150 (444)
T ss_dssp             ECCCBCCBHHHHHHH----CSCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCSSTTEEESBSS--------------TTC
T ss_pred             EEeCCCCCHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEEeccC--------------CCC
Confidence            999999999999987    57899999999999999999999999999999999999998432              346


Q ss_pred             CeEEeecCCccccccCCCCccccccccCCCcccceeccCCCCCccchHhHHHHHHHHHHhCccccccccCCCCCceee--
Q 018699          205 GLCLVDWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQEKKPWKFQVDTYGLCAIVHMMLHNSYMEIEKKASPDGGLVY--  282 (351)
Q Consensus       205 ~~~l~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~p~~~~~~~~~~~~~~--  282 (351)
                      .+||+|||++....  ..........||+.|+|||++.+..++.++|||||||++|+|++|.+||.............  
T Consensus       151 ~vkL~DFG~a~~~~--~~~~~~~~~~gt~~Y~APE~l~~~~~~~~~DIwSlGvilyell~G~~Pf~~~~~~~~~~~i~~~  228 (444)
T 3soa_A          151 AVKLADFGLAIEVE--GEQQAWFGFAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVGYPPFWDEDQHRLYQQIKAG  228 (444)
T ss_dssp             CEEECCCSSCBCCC--TTCCBCCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHT
T ss_pred             cEEEccCceeEEec--CCCceeecccCCcccCCHHHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCccHHHHHHHHHhC
Confidence            79999999996533  22233455689999999999999899999999999999999999999996543221000000  


Q ss_pred             --ecCcchhhhhHHHHHHHHHHHHhcCCCCCChHHHHHHHHHHHH
Q 018699          283 --LPKLSFKRYWKVELWKSLFTNLLNMSSGNDKEVLQNLQKSFQD  325 (351)
Q Consensus       283 --~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~~~~~~  325 (351)
                        ..+.+.....+ +.+.+||.+||.+||.+||++.|+|+|||..
T Consensus       229 ~~~~~~~~~~~~s-~~~~~li~~~L~~dP~~Rpta~e~L~hp~~~  272 (444)
T 3soa_A          229 AYDFPSPEWDTVT-PEAKDLINKMLTINPSKRITAAEALKHPWIS  272 (444)
T ss_dssp             CCCCCTTTTTTSC-HHHHHHHHHHSCSSTTTSCCHHHHHHSCTTH
T ss_pred             CCCCCccccccCC-HHHHHHHHHHcCCChhHCCCHHHHhcCcccc
Confidence              00111111233 7899999999999999999999999999854

>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ...

Probab=100.00  E-value=1.4e-45  Score=336.69  Aligned_cols=250  Identities=17%  Similarity=0.161  Sum_probs=202.9

Q ss_pred             CeeEEEEEEeeccCceEEEEEEecCCCCceEEEEecCCCCCh---HHHHHHHHHhhhccccccccccceeeecccCeeEE
Q 018699           47 GKKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFPW---EFYMYRQLDQRISGRERSSFGFAHRIHLYSDYSIL  123 (351)
Q Consensus        47 ~~~Y~i~~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~~~---e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  123 (351)
                      .++|++.+.||+|+||.||+|+ +..+|+.||+|++.+....   ...........+....|++++.+...+...+..|+
T Consensus        40 ~~~y~~~~~lG~G~~g~V~~~~-~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~l  118 (350)
T 1rdq_E           40 LDQFDRIKTLGTGSFGRVMLVK-HKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYM  118 (350)
T ss_dssp             GGGEEEEEEEEECSSCEEEEEE-ETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEE
T ss_pred             HHHCEEEEEeecCcCcEEEEEE-ECCCCCEEEEEEEEhHHhccHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcCCEEEE
Confidence            4789999999999999999999 5678899999998643211   11122222233445578888888888888899999


Q ss_pred             EEEecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeeccCCCCCccc
Q 018699          124 VCDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSGPWQD  203 (351)
Q Consensus       124 v~e~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~~~~~~~~  203 (351)
                      ||||++|++|.+++...    ..+++..++.++.||+.||.|||++||+||||||+||+++                 .+
T Consensus       119 v~e~~~gg~L~~~l~~~----~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~-----------------~~  177 (350)
T 1rdq_E          119 VMEYVAGGEMFSHLRRI----GRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLID-----------------QQ  177 (350)
T ss_dssp             EEECCTTCBHHHHHHHH----CCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEC-----------------TT
T ss_pred             EEcCCCCCcHHHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHHCCcccccCccceEEEC-----------------CC
Confidence            99999999999999874    6799999999999999999999999999999999999999                 77


Q ss_pred             CCeEEeecCCccccccCCCCccccccccCCCcccceeccCCCCCccchHhHHHHHHHHHHhCccccccccCCCCCceeee
Q 018699          204 QGLCLVDWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQEKKPWKFQVDTYGLCAIVHMMLHNSYMEIEKKASPDGGLVYL  283 (351)
Q Consensus       204 ~~~~l~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~p~~~~~~~~~~~~~~~  283 (351)
                      +.++|+|||++....     ......+||+.|+|||++.+..++.++|||||||++|+|++|..||...........+..
T Consensus       178 g~~kL~DFg~a~~~~-----~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~i~~  252 (350)
T 1rdq_E          178 GYIQVTDFGFAKRVK-----GRTWTLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVS  252 (350)
T ss_dssp             SCEEECCCTTCEECS-----SCBCCCEECGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHH
T ss_pred             CCEEEcccccceecc-----CCcccccCCccccCHHHhcCCCCCCcCCEecccHhHhHHhhCCCCCCCCCHHHHHHHHHc
Confidence            889999999987542     123456789999999999999999999999999999999999999975443211111112


Q ss_pred             cCcchhhhhHHHHHHHHHHHHhcCCCCCChH-----HHHHHHHHHH
Q 018699          284 PKLSFKRYWKVELWKSLFTNLLNMSSGNDKE-----VLQNLQKSFQ  324 (351)
Q Consensus       284 ~~~~~~~~~~~~~~~~li~~~L~~dP~~R~s-----~~e~l~~~~~  324 (351)
                      ....+|..++ ..+.+||.+||..||.+||+     +.++++|+|.
T Consensus       253 ~~~~~p~~~~-~~~~~li~~lL~~dp~~R~~~~~~~~~ei~~h~~f  297 (350)
T 1rdq_E          253 GKVRFPSHFS-SDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWF  297 (350)
T ss_dssp             CCCCCCTTCC-HHHHHHHHHHSCSCTTTCTTSSTTTTHHHHTSGGG
T ss_pred             CCCCCCCCCC-HHHHHHHHHHhhcCHHhccCCccCCHHHHHhCcCc
Confidence            2333445555 88999999999999999998     8999999863

>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7

Probab=100.00  E-value=1.7e-45  Score=332.51  Aligned_cols=255  Identities=14%  Similarity=0.145  Sum_probs=202.4

Q ss_pred             CeeEEEEEEeeccCceEEEEEEecCCCCceEEEEecCCCCChHHHHHHHHHhhhccccccccccceeeecccCeeEEEEE
Q 018699           47 GKKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFPWEFYMYRQLDQRISGRERSSFGFAHRIHLYSDYSILVCD  126 (351)
Q Consensus        47 ~~~Y~i~~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e  126 (351)
                      .++|++.+.||+|+||+||+|. +..+++.||+|++......... +...........|++++.+..++...+..++|||
T Consensus         4 ~~~y~~~~~lG~G~~g~Vy~~~-~~~~~~~~a~K~~~~~~~~~~~-~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e   81 (321)
T 1tki_A            4 YEKYMIAEDLGRGEFGIVHRCV-ETSSKKTYMAKFVKVKGTDQVL-VKKEISILNIARHRNILHLHESFESMEELVMIFE   81 (321)
T ss_dssp             TTTEEEEEEEEECSSEEEEEEE-ETTTTEEEEEEEECCCTHHHHH-HHHHHHHHHHSCCTTBCCEEEEEEETTEEEEEEC
T ss_pred             hhceEeeeEEecCCCeEEEEEE-ECCCCcEEEEEEEecCcccHHH-HHHHHHHHHhCCCCCCCeEeEEEecCCEEEEEEE
Confidence            4689999999999999999999 5778899999998755332222 2222233445578899999998888899999999


Q ss_pred             ecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeeccCCCCCcccCCe
Q 018699          127 YLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSGPWQDQGL  206 (351)
Q Consensus       127 ~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~~~~~~~~~~~  206 (351)
                      |+++++|.+++...   +..+++..++.++.|++.|+.|||++||+||||||+||+++.+               .++.+
T Consensus        82 ~~~g~~L~~~l~~~---~~~~~~~~~~~i~~qi~~al~~lH~~givH~Dlkp~NIl~~~~---------------~~~~~  143 (321)
T 1tki_A           82 FISGLDIFERINTS---AFELNEREIVSYVHQVCEALQFLHSHNIGHFDIRPENIIYQTR---------------RSSTI  143 (321)
T ss_dssp             CCCCCBHHHHHTSS---SCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSS---------------SCCCE
T ss_pred             eCCCCCHHHHHHhc---CCCCCHHHHHHHHHHHHHHHHHHHHCCCCcCCCCHHHEEEccC---------------CCCCE
Confidence            99999999998753   3579999999999999999999999999999999999999832               25779


Q ss_pred             EEeecCCccccccCCCCccccccccCCCcccceeccCCCCCccchHhHHHHHHHHHHhCccccccccCCCCCceeeecCc
Q 018699          207 CLVDWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQEKKPWKFQVDTYGLCAIVHMMLHNSYMEIEKKASPDGGLVYLPKL  286 (351)
Q Consensus       207 ~l~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~  286 (351)
                      +|+|||++....   .........||+.|+|||++.+..++.++|||||||++|+|++|..||.................
T Consensus       144 kl~Dfg~a~~~~---~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~  220 (321)
T 1tki_A          144 KIIEFGQARQLK---PGDNFRLLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAETNQQIIENIMNAEY  220 (321)
T ss_dssp             EECCCTTCEECC---TTCEEEEEESCGGGSCHHHHTTCEECHHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHHTCC
T ss_pred             EEEECCCCeECC---CCCccccccCChhhcCcHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCcCCCHHHHHHHHHcCCC
Confidence            999999986532   23344556789999999999988889999999999999999999999975443210000001111


Q ss_pred             c----hhhhhHHHHHHHHHHHHhcCCCCCChHHHHHHHHHHHH
Q 018699          287 S----FKRYWKVELWKSLFTNLLNMSSGNDKEVLQNLQKSFQD  325 (351)
Q Consensus       287 ~----~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~~~~~~  325 (351)
                      .    .....+ +.+.+||.+||.+||.+|||+.|+|+|||..
T Consensus       221 ~~~~~~~~~~s-~~~~~li~~~L~~dp~~Rpt~~e~l~hp~~~  262 (321)
T 1tki_A          221 TFDEEAFKEIS-IEAMDFVDRLLVKERKSRMTASEALQHPWLK  262 (321)
T ss_dssp             CCCHHHHTTSC-HHHHHHHHTTSCSSGGGSCCHHHHHHSHHHH
T ss_pred             CCChhhhccCC-HHHHHHHHHHcCCChhHCcCHHHHhcChhhc
Confidence            1    111223 7899999999999999999999999999754

>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens}

Probab=100.00  E-value=8.2e-45  Score=326.79  Aligned_cols=250  Identities=16%  Similarity=0.128  Sum_probs=195.9

Q ss_pred             CeeEEEEEEeeccCceEEEEEEecCCCCceEEEEecCCCCChHHHH---HHHHHhhhccccccccccceeeecccCeeEE
Q 018699           47 GKKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFPWEFYM---YRQLDQRISGRERSSFGFAHRIHLYSDYSIL  123 (351)
Q Consensus        47 ~~~Y~i~~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~~~e~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  123 (351)
                      .++|++.++||+|+||+||+|+ +..+++.||||++..........   +.++........+++++.+..++..++..|+
T Consensus        56 ~~~y~~~~~LG~G~~g~Vy~~~-~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~~~~~~~h~~iv~l~~~~~~~~~~~l  134 (311)
T 3p1a_A           56 QQSFQRLSRLGHGSYGEVFKVR-SKEDGRLYAVKRSMSPFRGPKDRARKLAEVGSHEKVGQHPCCVRLEQAWEEGGILYL  134 (311)
T ss_dssp             HHHEEEEEEEEEETTEEEEEEE-ETTTSCEEEEEEESSSCCSHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEE
T ss_pred             hhheeeeheeccCCCeEEEEEE-ECCCCeEEEEEEecccccChHHHHHHHHHHHHHHHhcCCCcEEEEEEEEEeCCEEEE
Confidence            4789999999999999999999 56788999999987654433322   2333333334478889888888888999999


Q ss_pred             EEEecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeeccCCCCCccc
Q 018699          124 VCDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSGPWQD  203 (351)
Q Consensus       124 v~e~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~~~~~~~~  203 (351)
                      ||||+ +++|.+++...   +..+++..++.++.|++.||.|||++||+|+||||+||+++                 .+
T Consensus       135 v~e~~-~~~L~~~~~~~---~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIll~-----------------~~  193 (311)
T 3p1a_A          135 QTELC-GPSLQQHCEAW---GASLPEAQVWGYLRDTLLALAHLHSQGLVHLDVKPANIFLG-----------------PR  193 (311)
T ss_dssp             EEECC-CCBHHHHHHHH---CSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEC-----------------GG
T ss_pred             EEecc-CCCHHHHHHhc---CCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHEEEC-----------------CC
Confidence            99999 77999988775   56799999999999999999999999999999999999998                 77


Q ss_pred             CCeEEeecCCccccccCCCCccccccccCCCcccceeccCCCCCccchHhHHHHHHHHHHhCccccccccCCCCCceeee
Q 018699          204 QGLCLVDWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQEKKPWKFQVDTYGLCAIVHMMLHNSYMEIEKKASPDGGLVYL  283 (351)
Q Consensus       204 ~~~~l~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~p~~~~~~~~~~~~~~~  283 (351)
                      +.+||+|||++.....   ........||+.|+|||++.+ .++.++|||||||++|+|++|..|+.......... ...
T Consensus       194 ~~~kl~DFG~a~~~~~---~~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~~g~~~~~~~~~~~~~~-~~~  268 (311)
T 3p1a_A          194 GRCKLGDFGLLVELGT---AGAGEVQEGDPRYMAPELLQG-SYGTAADVFSLGLTILEVACNMELPHGGEGWQQLR-QGY  268 (311)
T ss_dssp             GCEEECCCTTCEECC---------CCCCCGGGCCGGGGGT-CCSTHHHHHHHHHHHHHHHHTCCCCSSHHHHHHHT-TTC
T ss_pred             CCEEEccceeeeeccc---CCCCcccCCCccccCHhHhcC-CCCchhhHHHHHHHHHHHHhCCCCCCCccHHHHHh-ccC
Confidence            8899999999865432   222344568999999999876 68999999999999999999976654332110000 001


Q ss_pred             cCcchhhhhHHHHHHHHHHHHhcCCCCCChHHHHHHHHHHH
Q 018699          284 PKLSFKRYWKVELWKSLFTNLLNMSSGNDKEVLQNLQKSFQ  324 (351)
Q Consensus       284 ~~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~~~~~  324 (351)
                      ....++...+ +.+.+||.+||++||++||++.|+++|||.
T Consensus       269 ~~~~~~~~~~-~~l~~li~~~L~~dP~~Rpt~~ell~hp~~  308 (311)
T 3p1a_A          269 LPPEFTAGLS-SELRSVLVMMLEPDPKLRATAEALLALPVL  308 (311)
T ss_dssp             CCHHHHTTSC-HHHHHHHHHHSCSSTTTSCCHHHHHTSGGG
T ss_pred             CCcccccCCC-HHHHHHHHHHcCCChhhCcCHHHHHhCccc
Confidence            1122333344 889999999999999999999999999863

>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A*

Probab=100.00  E-value=2.8e-45  Score=332.05  Aligned_cols=257  Identities=19%  Similarity=0.227  Sum_probs=198.1

Q ss_pred             EEcCeeEEEEEEeeccCceEEEEEEec--CCCCceEEEEecCCCCCh----HHHHHHHHHhhhccccccccccceeeecc
Q 018699           44 EIGGKKYQIKGCAGQGGFAKVFKAYVN--GDPEDVVALKIQKPAFPW----EFYMYRQLDQRISGRERSSFGFAHRIHLY  117 (351)
Q Consensus        44 ~i~~~~Y~i~~~lg~G~~g~V~~a~~~--~~~~~~vaiK~~~~~~~~----e~~~~~~~~~~~~~~~~~~~~~~~~~~~~  117 (351)
                      .+..++|++.+.||+|+||+||+|++.  ..+++.||+|++.+....    ...........+....|++++.+...+..
T Consensus        13 ~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~   92 (327)
T 3a62_A           13 KIRPECFELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFIVDLIYAFQT   92 (327)
T ss_dssp             CCCGGGEEEEEEEEEETTEEEEEEEECSSTTTTCEEEEEEECCC--------------HHHHHHHCCCTTBCCEEEEEEC
T ss_pred             CCCHHHeEEEEEEEeCCCEEEEEEEEeccCCCCcEEEEEEEEHHHhhhhhhHHHHHHHHHHHHHhCCCCCccceeEEEEc
Confidence            355689999999999999999999952  367899999998764321    11111112222334568888888888888


Q ss_pred             cCeeEEEEEecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeeccCC
Q 018699          118 SDYSILVCDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDR  197 (351)
Q Consensus       118 ~~~~~lv~e~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~~  197 (351)
                      .+..|+||||+++++|.+++...    ..+++..++.++.||+.||.|||++||+||||||+||+++             
T Consensus        93 ~~~~~lv~e~~~~~~L~~~l~~~----~~~~~~~~~~~~~qi~~al~~lH~~~ivH~Dlkp~Nill~-------------  155 (327)
T 3a62_A           93 GGKLYLILEYLSGGELFMQLERE----GIFMEDTACFYLAEISMALGHLHQKGIIYRDLKPENIMLN-------------  155 (327)
T ss_dssp             SSCEEEEEECCTTEEHHHHHHHH----SSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCTTTEEEC-------------
T ss_pred             CCEEEEEEeCCCCCcHHHHHHhC----CCCCHHHHHHHHHHHHHHHHHHHhCCEEcccCCHHHeEEC-------------
Confidence            89999999999999999999873    6789999999999999999999999999999999999999             


Q ss_pred             CCCcccCCeEEeecCCccccccCCCCccccccccCCCcccceeccCCCCCccchHhHHHHHHHHHHhCccccccccCCCC
Q 018699          198 SGPWQDQGLCLVDWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQEKKPWKFQVDTYGLCAIVHMMLHNSYMEIEKKASPD  277 (351)
Q Consensus       198 ~~~~~~~~~~l~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~p~~~~~~~~~  277 (351)
                          .++.++|+|||++....  ..........||+.|+|||++.+..++.++|||||||++|+|++|..||........
T Consensus       156 ----~~~~~kl~Dfg~~~~~~--~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~  229 (327)
T 3a62_A          156 ----HQGHVKLTDFGLCKESI--HDGTVTHTFCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPFTGENRKKT  229 (327)
T ss_dssp             ----TTSCEEECCCSCC------------CTTSSCCTTSCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHH
T ss_pred             ----CCCcEEEEeCCcccccc--cCCccccccCCCcCccCHhhCcCCCCCCcccchhHHHHHHHHHHCCCCCCCCCHHHH
Confidence                77889999999886422  122233456799999999999988899999999999999999999999975433211


Q ss_pred             CceeeecCcchhhhhHHHHHHHHHHHHhcCCCCCCh-----HHHHHHHHHHH
Q 018699          278 GGLVYLPKLSFKRYWKVELWKSLFTNLLNMSSGNDK-----EVLQNLQKSFQ  324 (351)
Q Consensus       278 ~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~-----s~~e~l~~~~~  324 (351)
                      ..........++..++ +.+++||.+||..||.+||     ++.+++.|||.
T Consensus       230 ~~~i~~~~~~~p~~~~-~~~~~li~~~L~~dp~~R~~~~~~~~~e~l~hp~f  280 (327)
T 3a62_A          230 IDKILKCKLNLPPYLT-QEARDLLKKLLKRNAASRLGAGPGDAGEVQAHPFF  280 (327)
T ss_dssp             HHHHHHTCCCCCTTSC-HHHHHHHHHHSCSCGGGSTTSSTTTHHHHHHSGGG
T ss_pred             HHHHHhCCCCCCCCCC-HHHHHHHHHHHhcCHhhccCCCCCCHHHHHcCCcc
Confidence            1111122233344445 8899999999999999999     88999999874

>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B

Probab=100.00  E-value=1.4e-44  Score=331.72  Aligned_cols=253  Identities=20%  Similarity=0.233  Sum_probs=202.1

Q ss_pred             eeEEEEEEeeccCceEEEEEEecCCCCceEEEEecCCCCChH--HHHHHHHHhhhccccccccccceeeecccCeeEEEE
Q 018699           48 KKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFPWE--FYMYRQLDQRISGRERSSFGFAHRIHLYSDYSILVC  125 (351)
Q Consensus        48 ~~Y~i~~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~~~e--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~  125 (351)
                      ++|++.+.||+|+||+||+|. +..+++.||+|++.......  ...+...........|++++.+..++...+..|+||
T Consensus        29 ~~y~~~~~lG~G~~g~V~~~~-~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~lv~  107 (362)
T 2bdw_A           29 DNYDVKEELGKGAFSVVRRCV-HKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVF  107 (362)
T ss_dssp             HHEEEEEEEEEETTEEEEEEE-ETTTCCEEEEEEEETTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             cCeEEeeEEecCCCeEEEEEE-ECCCCCEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEE
Confidence            689999999999999999999 57788999999987654322  222222233344557889999999888899999999


Q ss_pred             EecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeeccCCCCCcccCC
Q 018699          126 DYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSGPWQDQG  205 (351)
Q Consensus       126 e~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~~~~~~~~~~  205 (351)
                      ||+++++|.+.+..    ...+++..++.++.||+.||.|||++||+|+||||+||+++.++              .++.
T Consensus       108 e~~~gg~L~~~l~~----~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~Dlkp~NIll~~~~--------------~~~~  169 (362)
T 2bdw_A          108 DLVTGGELFEDIVA----REFYSEADASHCIQQILESIAYCHSNGIVHRNLKPENLLLASKA--------------KGAA  169 (362)
T ss_dssp             CCCCSCBHHHHHTT----CSCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCSGGGEEESCSS--------------TTCC
T ss_pred             ecCCCCCHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCchHHEEEecCC--------------CCCC
Confidence            99999999999876    46799999999999999999999999999999999999998432              2356


Q ss_pred             eEEeecCCccccccCCCCccccccccCCCcccceeccCCCCCccchHhHHHHHHHHHHhCccccccccCCCC------Cc
Q 018699          206 LCLVDWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQEKKPWKFQVDTYGLCAIVHMMLHNSYMEIEKKASPD------GG  279 (351)
Q Consensus       206 ~~l~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~p~~~~~~~~~------~~  279 (351)
                      ++|+|||++....   .........||+.|+|||++.+..++.++|||||||++|+|++|..||........      +.
T Consensus       170 ~kl~DfG~a~~~~---~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~~~~~~~i~~~~  246 (362)
T 2bdw_A          170 VKLADFGLAIEVN---DSEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGA  246 (362)
T ss_dssp             EEECCCTTCBCCT---TCCSCCCSCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTC
T ss_pred             EEEeecCcceEec---CCcccccCCCCccccCHHHHccCCCCchhhHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHhCC
Confidence            9999999986543   22233456799999999999998999999999999999999999999975432100      11


Q ss_pred             eeeecCcchhhhhHHHHHHHHHHHHhcCCCCCChHHHHHHHHHHHH
Q 018699          280 LVYLPKLSFKRYWKVELWKSLFTNLLNMSSGNDKEVLQNLQKSFQD  325 (351)
Q Consensus       280 ~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~~~~~~  325 (351)
                      +..  +.+.....+ +.+.+||.+||.+||++||++.|+|.|||..
T Consensus       247 ~~~--~~~~~~~~~-~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~  289 (362)
T 2bdw_A          247 YDY--PSPEWDTVT-PEAKSLIDSMLTVNPKKRITADQALKVPWIC  289 (362)
T ss_dssp             CCC--CTTGGGGSC-HHHHHHHHHHSCSSGGGSCCHHHHTTSHHHH
T ss_pred             CCC--CcccccCCC-HHHHHHHHHHcCCChhhCcCHHHHhcCcccC
Confidence            101  111111233 7899999999999999999999999999854

>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A

Probab=100.00  E-value=8.3e-45  Score=330.72  Aligned_cols=257  Identities=17%  Similarity=0.187  Sum_probs=200.8

Q ss_pred             CeeEEEEEEeeccCceEEEEEEecCCCCceEEEEecCCCCChHHHHHHHHHhhhccccccccccceeeecccCeeEEEEE
Q 018699           47 GKKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFPWEFYMYRQLDQRISGRERSSFGFAHRIHLYSDYSILVCD  126 (351)
Q Consensus        47 ~~~Y~i~~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e  126 (351)
                      .++|++.+.||+|+||+||+|. +..+++.||+|++.+...........+   .....|++++.+..++..++..|+|||
T Consensus        21 ~~~y~~~~~lG~G~~g~V~~~~-~~~~~~~~avK~~~~~~~~~~~E~~~l---~~~~~hp~iv~~~~~~~~~~~~~lv~E   96 (342)
T 2qr7_A           21 TDGYEVKEDIGVGSYSVCKRCI-HKATNMEFAVKIIDKSKRDPTEEIEIL---LRYGQHPNIITLKDVYDDGKYVYVVTE   96 (342)
T ss_dssp             HHHEEEEEEEEECSSEEEEEEE-ETTTTEEEEEEEEETTTCCCHHHHHHH---HHHTTSTTBCCEEEEEECSSEEEEEEC
T ss_pred             cccEEEEEEEeeCCCEEEEEEE-ECCCCCEEEEEEEEcccCChHHHHHHH---HHhcCCCCcCeEEEEEEcCCEEEEEEe
Confidence            4789999999999999999999 577899999999876543222111111   122357889999998888999999999


Q ss_pred             ecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeeccCCCCCcccCCe
Q 018699          127 YLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSGPWQDQGL  206 (351)
Q Consensus       127 ~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~~~~~~~~~~~  206 (351)
                      |++||+|.+.+..    ...+++..++.++.||+.||.|||++||+||||||+||++..++.             ..+.+
T Consensus        97 ~~~gg~L~~~i~~----~~~~~~~~~~~~~~qi~~al~~lH~~givHrDlkp~NIl~~~~~~-------------~~~~~  159 (342)
T 2qr7_A           97 LMKGGELLDKILR----QKFFSEREASAVLFTITKTVEYLHAQGVVHRDLKPSNILYVDESG-------------NPESI  159 (342)
T ss_dssp             CCCSCBHHHHHHT----CTTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEESSSSC-------------SGGGE
T ss_pred             CCCCCcHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHCCcEeccCCHHHEEEecCCC-------------CcCeE
Confidence            9999999999987    567999999999999999999999999999999999999864322             23459


Q ss_pred             EEeecCCccccccCCCCccccccccCCCcccceeccCCCCCccchHhHHHHHHHHHHhCccccccccCCCCCce------
Q 018699          207 CLVDWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQEKKPWKFQVDTYGLCAIVHMMLHNSYMEIEKKASPDGGL------  280 (351)
Q Consensus       207 ~l~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~p~~~~~~~~~~~~------  280 (351)
                      +|+|||++.....  ........+||+.|+|||++.+..++.++|||||||++|+|++|..||...........      
T Consensus       160 kl~Dfg~a~~~~~--~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~~~~i~~  237 (342)
T 2qr7_A          160 RICDFGFAKQLRA--ENGLLMTPCYTANFVAPEVLERQGYDAACDIWSLGVLLYTMLTGYTPFANGPDDTPEEILARIGS  237 (342)
T ss_dssp             EECCCTTCEECBC--TTCCBCCSSCCSSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCSSCSSTTSCHHHHHHHHHH
T ss_pred             EEEECCCcccCcC--CCCceeccCCCccccCHHHhcCCCCCCccCeeeHhHHHHHHhcCCCCCCCCCcCCHHHHHHHHcc
Confidence            9999999875432  22234556789999999999888889999999999999999999999975322100000      


Q ss_pred             -eeecCcchhhhhHHHHHHHHHHHHhcCCCCCChHHHHHHHHHHHHHH
Q 018699          281 -VYLPKLSFKRYWKVELWKSLFTNLLNMSSGNDKEVLQNLQKSFQDYL  327 (351)
Q Consensus       281 -~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~~~~~~~~  327 (351)
                       ............+ +.+++||.+||.+||++||++.++++|||..-+
T Consensus       238 ~~~~~~~~~~~~~s-~~~~~li~~~L~~dP~~R~t~~~il~hp~~~~~  284 (342)
T 2qr7_A          238 GKFSLSGGYWNSVS-DTAKDLVSKMLHVDPHQRLTAALVLRHPWIVHW  284 (342)
T ss_dssp             CCCCCCSTTTTTSC-HHHHHHHHHHTCSSTTTSCCHHHHTTSHHHHTG
T ss_pred             CCcccCccccccCC-HHHHHHHHHHCCCChhHCcCHHHHhcCCeecCc
Confidence             0011111112234 889999999999999999999999999986544

>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*

Probab=100.00  E-value=2.1e-45  Score=346.69  Aligned_cols=256  Identities=19%  Similarity=0.233  Sum_probs=201.3

Q ss_pred             EcCeeEEEEEEeeccCceEEEEEEecCCCCceEEEEecCCCC---ChHHHHHHHHHhhhccccccccccceeeecccCee
Q 018699           45 IGGKKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAF---PWEFYMYRQLDQRISGRERSSFGFAHRIHLYSDYS  121 (351)
Q Consensus        45 i~~~~Y~i~~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~---~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  121 (351)
                      +..++|++.+.||+|+||.||+|+ +..+|+.||||++.+..   ..+..........+....|++++.+...+...+.+
T Consensus       145 ~~~~~y~~~~~lG~G~~g~V~~~~-~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~  223 (446)
T 4ejn_A          145 VTMNEFEYLKLLGKGTFGKVILVK-EKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRL  223 (446)
T ss_dssp             CCGGGEEEEEEEEEETTEEEEEEE-ETTTCCEEEEEEEEHHHHC-------------CCCCCSCTTSCCEEEEEEETTEE
T ss_pred             CChHHcEEeEEEeeCcCEEEEEEE-EcCCCCEEEEEEEEhhhhhhhHHHHHHHHHHHHHHhCCCCeEeeEEEEEeeCCEE
Confidence            345789999999999999999999 57889999999986431   11112222222334556788888888888888999


Q ss_pred             EEEEEecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHH-CCceecCCCCCcEEEeecCCcceeeccCCCCC
Q 018699          122 ILVCDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHD-VGIIHGDFKPDNLLIRYARDELTVLDHDRSGP  200 (351)
Q Consensus       122 ~lv~e~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~-~~i~H~dl~p~Nill~~~~~~~~~~~~~~~~~  200 (351)
                      |+||||+++++|.+++..    +..+++..++.++.||+.||.|||+ +||+||||||+||+++                
T Consensus       224 ~lv~e~~~~~~L~~~l~~----~~~~~~~~~~~~~~qi~~aL~~LH~~~giiHrDlkp~NIll~----------------  283 (446)
T 4ejn_A          224 CFVMEYANGGELFFHLSR----ERVFSEDRARFYGAEIVSALDYLHSEKNVVYRDLKLENLMLD----------------  283 (446)
T ss_dssp             EEEECCCSSCBHHHHHHH----HSCCCHHHHHHHHHHHHHHHHHHHHHTCCCCCCCCGGGEEEC----------------
T ss_pred             EEEEeeCCCCcHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHhhcCCEEECCCCHHHEEEC----------------
Confidence            999999999999999987    3689999999999999999999998 9999999999999999                


Q ss_pred             cccCCeEEeecCCccccccCCCCccccccccCCCcccceeccCCCCCccchHhHHHHHHHHHHhCccccccccCCCCCce
Q 018699          201 WQDQGLCLVDWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQEKKPWKFQVDTYGLCAIVHMMLHNSYMEIEKKASPDGGL  280 (351)
Q Consensus       201 ~~~~~~~l~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~p~~~~~~~~~~~~  280 (351)
                       .++.++|+|||++....  .........+||+.|+|||++.+..++.++|||||||++|+|++|..||...........
T Consensus       284 -~~~~~kl~DFG~a~~~~--~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~  360 (446)
T 4ejn_A          284 -KDGHIKITDFGLCKEGI--KDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFEL  360 (446)
T ss_dssp             -SSSCEEECCCCCCCTTC--C-----CCSSSCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHH
T ss_pred             -CCCCEEEccCCCceecc--CCCcccccccCCccccCHhhcCCCCCCCccchhhhHHHHHHHhhCCCCCCCCCHHHHHHH
Confidence             77889999999986422  223334567899999999999999999999999999999999999999975443211111


Q ss_pred             eeecCcchhhhhHHHHHHHHHHHHhcCCCCCCh-----HHHHHHHHHHHH
Q 018699          281 VYLPKLSFKRYWKVELWKSLFTNLLNMSSGNDK-----EVLQNLQKSFQD  325 (351)
Q Consensus       281 ~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~-----s~~e~l~~~~~~  325 (351)
                      .......+|...+ +.+.+||.+||.+||.+||     ++.|+++|||..
T Consensus       361 i~~~~~~~p~~~~-~~~~~li~~~L~~dP~~R~~~~~~t~~ell~hp~f~  409 (446)
T 4ejn_A          361 ILMEEIRFPRTLG-PEAKSLLSGLLKKDPKQRLGGGSEDAKEIMQHRFFA  409 (446)
T ss_dssp             HHHCCCCCCTTSC-HHHHHHHHHHTCSSTTTSTTCSTTTHHHHHTSGGGT
T ss_pred             HHhCCCCCCccCC-HHHHHHHHHHcccCHHHhCCCCCCCHHHHHhCcccc
Confidence            1222333444455 8899999999999999999     999999998754

>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A

Probab=100.00  E-value=1.9e-44  Score=330.94  Aligned_cols=256  Identities=14%  Similarity=0.143  Sum_probs=191.7

Q ss_pred             EEcCeeEEEEEEeeccCceEEEEEEecCCCCceEEEEecCCCCChHHHHHHHHHhhhccccccccccceeeecccCeeEE
Q 018699           44 EIGGKKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFPWEFYMYRQLDQRISGRERSSFGFAHRIHLYSDYSIL  123 (351)
Q Consensus        44 ~i~~~~Y~i~~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  123 (351)
                      ....++|++.+.||+|+||+||+|+ +..+++.||+|++...........+++. ......|++++.+..++...+..++
T Consensus        16 ~~~~~~y~~~~~lG~G~~g~V~~~~-~~~~~~~vavK~~~~~~~~~~~~~~E~~-~l~~l~hpniv~~~~~~~~~~~~~l   93 (361)
T 3uc3_A           16 MHDSDRYDFVKDIGSGNFGVARLMR-DKLTKELVAVKYIERGAAIDENVQREII-NHRSLRHPNIVRFKEVILTPTHLAI   93 (361)
T ss_dssp             CCCTTTEEEEEEESSSTTSSEEEEE-ETTTCCEEEEEEEESSTTSCHHHHHHHH-HHHHCCCTTBCCEEEEEECSSEEEE
T ss_pred             CCCCCcEEEEEEeccCCCEEEEEEE-ECCCCcEEEEEEEecCccccHHHHHHHH-HHHhCCCCCCCcEEEEEeeCCEEEE
Confidence            3456899999999999999999999 5778999999998765443333333332 2344568899999998888999999


Q ss_pred             EEEecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeeccCCCCCccc
Q 018699          124 VCDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSGPWQD  203 (351)
Q Consensus       124 v~e~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~~~~~~~~  203 (351)
                      ||||+++++|.+++...    ..+++..++.++.|++.||+|||++||+||||||+||+++.+               ..
T Consensus        94 v~e~~~~~~L~~~l~~~----~~~~~~~~~~i~~ql~~~L~~LH~~~ivH~Dlkp~Nill~~~---------------~~  154 (361)
T 3uc3_A           94 IMEYASGGELYERICNA----GRFSEDEARFFFQQLLSGVSYCHSMQICHRDLKLENTLLDGS---------------PA  154 (361)
T ss_dssp             EEECCCSCBHHHHHHHH----SSCCHHHHHHHHHHHHHHHHHHHHTTCCSCCCCGGGEEECSS---------------SS
T ss_pred             EEEeCCCCCHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEcCC---------------CC
Confidence            99999999999999773    679999999999999999999999999999999999999822               22


Q ss_pred             CCeEEeecCCccccccCCCCccccccccCCCcccceeccCCCCC-ccchHhHHHHHHHHHHhCccccccccCCCCCce--
Q 018699          204 QGLCLVDWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQEKKPWK-FQVDTYGLCAIVHMMLHNSYMEIEKKASPDGGL--  280 (351)
Q Consensus       204 ~~~~l~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~-~~~DiwslG~il~~l~~g~~p~~~~~~~~~~~~--  280 (351)
                      +.++|+|||++....   .........||+.|+|||++.+..++ .++|||||||++|+|++|..||...........  
T Consensus       155 ~~~kl~Dfg~a~~~~---~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~~~  231 (361)
T 3uc3_A          155 PRLKICDFGYSKSSV---LHSQPKSTVGTPAYIAPEVLLRQEYDGKIADVWSCGVTLYVMLVGAYPFEDPEEPRDYRKTI  231 (361)
T ss_dssp             CCEEECCCCCC------------------CTTSCHHHHHCSSCCHHHHHHHHHHHHHHHHHHSSCSCC----CCCHHHHH
T ss_pred             ceEEEeecCcccccc---ccCCCCCCcCCCCcCChhhhcCCCCCCCeeeeehhHHHHHHHHhCCCCCCCCccHHHHHHHH
Confidence            349999999886322   12223455789999999999887776 448999999999999999999976543211100  


Q ss_pred             --eeecCcchhh--hhHHHHHHHHHHHHhcCCCCCChHHHHHHHHHHH
Q 018699          281 --VYLPKLSFKR--YWKVELWKSLFTNLLNMSSGNDKEVLQNLQKSFQ  324 (351)
Q Consensus       281 --~~~~~~~~~~--~~~~~~~~~li~~~L~~dP~~R~s~~e~l~~~~~  324 (351)
                        ........+.  ..+ +.+.+||.+||.+||.+|||+.|+++|||.
T Consensus       232 ~~~~~~~~~~~~~~~~s-~~~~~li~~~L~~dP~~Rps~~ell~hp~f  278 (361)
T 3uc3_A          232 QRILSVKYSIPDDIRIS-PECCHLISRIFVADPATRISIPEIKTHSWF  278 (361)
T ss_dssp             HHHHTTCCCCCTTSCCC-HHHHHHHHHHSCSCTTTSCCHHHHHTSHHH
T ss_pred             HHHhcCCCCCCCcCCCC-HHHHHHHHHHccCChhHCcCHHHHHhCcch
Confidence              0001111111  223 789999999999999999999999999885

>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens}

Probab=100.00  E-value=8.4e-45  Score=328.82  Aligned_cols=256  Identities=18%  Similarity=0.183  Sum_probs=200.0

Q ss_pred             CeeEEEEEEeeccCceEEEEEEecCCCCceEEEEecCCCCCh------HHHHHHHHHhhhccccccccccceeeecccCe
Q 018699           47 GKKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFPW------EFYMYRQLDQRISGRERSSFGFAHRIHLYSDY  120 (351)
Q Consensus        47 ~~~Y~i~~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~~~------e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  120 (351)
                      .++|++.+.||+|+||+||+|. +..+|+.||+|++......      ....+......+....|++++.+..++...+.
T Consensus        10 ~~~y~~~~~lG~G~~g~V~~~~-~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~   88 (326)
T 2y0a_A           10 DDYYDTGEELGSGQFAVVKKCR-EKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTD   88 (326)
T ss_dssp             HHHEEEEEEEECCSSEEEEEEE-ETTTCCEEEEEEEEBCCSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSE
T ss_pred             ccceEeceEEeeCCCeEEEEEE-ECCCCcEEEEEEEEccccccccchhhHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCE
Confidence            4689999999999999999999 5778899999998654321      11222222223344568899999888888899


Q ss_pred             eEEEEEecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeeccCCCCC
Q 018699          121 SILVCDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSGP  200 (351)
Q Consensus       121 ~~lv~e~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~~~~~  200 (351)
                      .++||||+++++|.+++..    ...+++..++.++.||+.||.|||++||+|+||||+||+++.+..            
T Consensus        89 ~~lv~e~~~~~~L~~~l~~----~~~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dlkp~NIll~~~~~------------  152 (326)
T 2y0a_A           89 VILILELVAGGELFDFLAE----KESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNV------------  152 (326)
T ss_dssp             EEEEEECCCSCBHHHHHTT----SSCCBHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESCSSS------------
T ss_pred             EEEEEEcCCCCCHHHHHHh----cCCcCHHHHHHHHHHHHHHHHHHHHCCeEcCCCCHHHEEEecCCC------------
Confidence            9999999999999999976    568999999999999999999999999999999999999984321            


Q ss_pred             cccCCeEEeecCCccccccCCCCccccccccCCCcccceeccCCCCCccchHhHHHHHHHHHHhCccccccccCCCCCce
Q 018699          201 WQDQGLCLVDWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQEKKPWKFQVDTYGLCAIVHMMLHNSYMEIEKKASPDGGL  280 (351)
Q Consensus       201 ~~~~~~~l~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~p~~~~~~~~~~~~  280 (351)
                       ....++|+|||++.....   ........||+.|+|||++.+..++.++|||||||++|+|++|..||...........
T Consensus       153 -~~~~~kl~Dfg~a~~~~~---~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~  228 (326)
T 2y0a_A          153 -PKPRIKIIDFGLAHKIDF---GNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLAN  228 (326)
T ss_dssp             -SSCCEEECCCTTCEECCT---TSCCCCCCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHH
T ss_pred             -CCCCEEEEECCCCeECCC---CCccccccCCcCcCCceeecCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCHHHHHHH
Confidence             233799999999875432   2234456799999999999988999999999999999999999999965432100000


Q ss_pred             e----eecCcchhhhhHHHHHHHHHHHHhcCCCCCChHHHHHHHHHHH
Q 018699          281 V----YLPKLSFKRYWKVELWKSLFTNLLNMSSGNDKEVLQNLQKSFQ  324 (351)
Q Consensus       281 ~----~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~~~~~  324 (351)
                      .    ...........+ +.+.+||.+||.+||++|||+.|+|+|||.
T Consensus       229 ~~~~~~~~~~~~~~~~~-~~~~~li~~~L~~dP~~Rpt~~e~l~hp~~  275 (326)
T 2y0a_A          229 VSAVNYEFEDEYFSNTS-ALAKDFIRRLLVKDPKKRMTIQDSLQHPWI  275 (326)
T ss_dssp             HHHTCCCCCHHHHTTSC-HHHHHHHHHHSCSSGGGSCCHHHHHHSTTT
T ss_pred             HHhcCCCcCccccccCC-HHHHHHHHHHccCChhhCCCHHHHhcCCCc
Confidence            0    001111112233 789999999999999999999999999874

>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A*

Probab=100.00  E-value=5.5e-44  Score=321.40  Aligned_cols=258  Identities=17%  Similarity=0.180  Sum_probs=195.2

Q ss_pred             EEEEcCeeEEEEEEeeccCceEEEEEEecCCCCceEEEEecCCCCChH--HHHHHHHHhhhccccccccccceeeecccC
Q 018699           42 TIEIGGKKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFPWE--FYMYRQLDQRISGRERSSFGFAHRIHLYSD  119 (351)
Q Consensus        42 ~~~i~~~~Y~i~~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~~~e--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  119 (351)
                      ......++|++.+.||+|+||+||+|++  .+++.||+|++......+  ...............|++++.+..++..++
T Consensus        15 ~~q~l~~~y~~~~~lG~G~~g~V~~~~~--~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~   92 (311)
T 3niz_A           15 YFQGLMEKYQKLEKVGEGTYGVVYKAKD--SQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDVIHSER   92 (311)
T ss_dssp             CEECSSCEEEEEEEEEECSSCEEEEEEE--TTSCEEEEEEEC------CHHHHHHHHHHHHHHCCCTTBCCEEEEECCSS
T ss_pred             eecchHhhhHhhhhccCCCCeEEEEEEE--CCCCEEEEEEEecccccchhhHHHHHHHHHHHHcCCCCEeeeeeEEccCC
Confidence            4455568999999999999999999995  348999999987543322  111222223334456889999999888889


Q ss_pred             eeEEEEEecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeeccCCCC
Q 018699          120 YSILVCDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSG  199 (351)
Q Consensus       120 ~~~lv~e~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~~~~  199 (351)
                      ..++||||++ ++|.+.+...   ...+++..++.++.|++.||.|||++||+||||||+||+++               
T Consensus        93 ~~~lv~e~~~-~~l~~~~~~~---~~~~~~~~~~~~~~qi~~~l~~LH~~~ivH~Dikp~NIl~~---------------  153 (311)
T 3niz_A           93 CLTLVFEFME-KDLKKVLDEN---KTGLQDSQIKIYLYQLLRGVAHCHQHRILHRDLKPQNLLIN---------------  153 (311)
T ss_dssp             CEEEEEECCS-EEHHHHHHTC---TTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEC---------------
T ss_pred             EEEEEEcCCC-CCHHHHHHhc---cCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCchHhEEEC---------------
Confidence            9999999996 5888888764   45699999999999999999999999999999999999999               


Q ss_pred             CcccCCeEEeecCCccccccCCCCccccccccCCCcccceeccC-CCCCccchHhHHHHHHHHHHhCccccccccCCCCC
Q 018699          200 PWQDQGLCLVDWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQEK-KPWKFQVDTYGLCAIVHMMLHNSYMEIEKKASPDG  278 (351)
Q Consensus       200 ~~~~~~~~l~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~~DiwslG~il~~l~~g~~p~~~~~~~~~~  278 (351)
                        .++.++|+|||++.....  .........+|+.|+|||++.+ ..++.++|||||||++|+|++|..||.........
T Consensus       154 --~~~~~kl~Dfg~a~~~~~--~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~  229 (311)
T 3niz_A          154 --SDGALKLADFGLARAFGI--PVRSYTHEVVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDDQL  229 (311)
T ss_dssp             --TTCCEEECCCTTCEETTS--CCC---CCCCCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSTTTHH
T ss_pred             --CCCCEEEccCcCceecCC--CcccccCCcccCCcCCHHHhcCCCCCCchHHhHHHHHHHHHHHhCCCCCCCCChHHHH
Confidence              778899999999875431  2233445578999999999876 56899999999999999999999999654432110


Q ss_pred             cee---------------------------eecCc---chhhhhHHHHHHHHHHHHhcCCCCCChHHHHHHHHHHHH
Q 018699          279 GLV---------------------------YLPKL---SFKRYWKVELWKSLFTNLLNMSSGNDKEVLQNLQKSFQD  325 (351)
Q Consensus       279 ~~~---------------------------~~~~~---~~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~~~~~~  325 (351)
                      ...                           .....   ......+ +.+.+||.+||++||++|||+.|+|+|||..
T Consensus       230 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~li~~~L~~dP~~Rpt~~ell~hp~f~  305 (311)
T 3niz_A          230 PKIFSILGTPNPREWPQVQELPLWKQRTFQVFEKKPWSSIIPGFC-QEGIDLLSNMLCFDPNKRISARDAMNHPYFK  305 (311)
T ss_dssp             HHHHHHHCCCCTTTSGGGTTSHHHHSCCCCCCCCCCHHHHSTTCC-HHHHHHHHHHSCSCTTTSCCHHHHHTSGGGT
T ss_pred             HHHHHHHCCCChHHhhhhhccchhhhcccccccCCcHHHhCcccC-HHHHHHHHHHcCCChhHCCCHHHHhcCcccc
Confidence            000                           00000   0111123 6789999999999999999999999998743

>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens}

Probab=100.00  E-value=6.6e-45  Score=335.47  Aligned_cols=254  Identities=18%  Similarity=0.216  Sum_probs=203.4

Q ss_pred             EcCeeEEEEEEeeccCceEEEEEEecCCCCceEEEEecCCCCC---hHHHHHHHHHhhhccccccccccceeeecccCee
Q 018699           45 IGGKKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFP---WEFYMYRQLDQRISGRERSSFGFAHRIHLYSDYS  121 (351)
Q Consensus        45 i~~~~Y~i~~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~~---~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  121 (351)
                      +..++|++.+.||+|+||.||+|. +..+++.||+|++.+...   .....+......+....|++++.+...+...+..
T Consensus        12 v~~~~y~i~~~LG~G~fG~V~~~~-~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~   90 (384)
T 4fr4_A           12 VNFDHFEILRAIGKGSFGKVCIVQ-KNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEHPFLVNLWYSFQDEEDM   90 (384)
T ss_dssp             CCGGGEEEEEEEECCTTCCEEEEE-ETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEE
T ss_pred             CChHHeEEEEEEeeCCCeEEEEEE-ECCCCCEEEEEEEehhhcccHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEE
Confidence            445789999999999999999999 578899999999764321   1112222222334455788999998888888999


Q ss_pred             EEEEEecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeeccCCCCCc
Q 018699          122 ILVCDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSGPW  201 (351)
Q Consensus       122 ~lv~e~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~~~~~~  201 (351)
                      |+||||+.||+|.+++..    +..+++..++.++.||+.||.|||++||+||||||+||+++                 
T Consensus        91 ~lv~e~~~gg~L~~~l~~----~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIll~-----------------  149 (384)
T 4fr4_A           91 FMVVDLLLGGDLRYHLQQ----NVHFKEETVKLFICELVMALDYLQNQRIIHRDMKPDNILLD-----------------  149 (384)
T ss_dssp             EEEECCCTTEEHHHHHHT----TCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEC-----------------
T ss_pred             EEEEecCCCCcHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCcHHHeEEC-----------------
Confidence            999999999999999987    56899999999999999999999999999999999999999                 


Q ss_pred             ccCCeEEeecCCccccccCCCCccccccccCCCcccceecc---CCCCCccchHhHHHHHHHHHHhCccccccccCCCCC
Q 018699          202 QDQGLCLVDWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQE---KKPWKFQVDTYGLCAIVHMMLHNSYMEIEKKASPDG  278 (351)
Q Consensus       202 ~~~~~~l~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~---~~~~~~~~DiwslG~il~~l~~g~~p~~~~~~~~~~  278 (351)
                      .++.++|+|||++....   ........+||+.|+|||++.   +..++.++|||||||++|+|++|..||.........
T Consensus       150 ~~g~vkL~DFG~a~~~~---~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~il~elltG~~Pf~~~~~~~~~  226 (384)
T 4fr4_A          150 EHGHVHITDFNIAAMLP---RETQITTMAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRPYHIRSSTSSK  226 (384)
T ss_dssp             TTSCEEECCCTTCEECC---TTCCBCCCCSCGGGCCGGGTCCCSSCCBCTTHHHHHHHHHHHHHHHSSCSSCCCTTSCHH
T ss_pred             CCCCEEEeccceeeecc---CCCceeccCCCccccCCeeeccCCCCCCCccceeechHHHHHHHHhCCCCCCCCCCccHH
Confidence            78889999999996532   234456678999999999986   345889999999999999999999999754332110


Q ss_pred             c---eeeecCcchhhhhHHHHHHHHHHHHhcCCCCCChH-HHHHHHHHHH
Q 018699          279 G---LVYLPKLSFKRYWKVELWKSLFTNLLNMSSGNDKE-VLQNLQKSFQ  324 (351)
Q Consensus       279 ~---~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~s-~~e~l~~~~~  324 (351)
                      .   ........++..++ +.+.+||.+||..||.+||+ +.+++.|||.
T Consensus       227 ~~~~~~~~~~~~~p~~~s-~~~~~li~~lL~~dP~~R~s~~~~l~~hp~f  275 (384)
T 4fr4_A          227 EIVHTFETTVVTYPSAWS-QEMVSLLKKLLEPNPDQRFSQLSDVQNFPYM  275 (384)
T ss_dssp             HHHHHHHHCCCCCCTTSC-HHHHHHHHHHSCSSGGGSCCSHHHHHTSGGG
T ss_pred             HHHHHHhhcccCCCCcCC-HHHHHHHHHHhcCCHhHhcccHHHHHcChhh
Confidence            0   01123334455566 88999999999999999998 7777788863

>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A*

Probab=100.00  E-value=2.2e-45  Score=332.16  Aligned_cols=255  Identities=17%  Similarity=0.157  Sum_probs=197.9

Q ss_pred             CeeEEEEEEeeccCceEEEEEEecCCCCceEEEEecCCCCChH-HHHHHHHHhhhccccccccccceeeecccCeeEEEE
Q 018699           47 GKKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFPWE-FYMYRQLDQRISGRERSSFGFAHRIHLYSDYSILVC  125 (351)
Q Consensus        47 ~~~Y~i~~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~~~e-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~  125 (351)
                      .++|++.+.||+|+||+||+|. +..+++.||+|++....... .+.+...........|++++.+..+...++..|+||
T Consensus         6 ~~~y~i~~~lG~G~~g~V~~~~-~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~   84 (323)
T 3tki_A            6 VEDWDLVQTLGEGAYGEVQLAV-NRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFL   84 (323)
T ss_dssp             TTCEEEEEEEEEETTEEEEEEE-ETTTCCEEEEEEEECC-------CHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             hhhceeeeEEecCCCEEEEEEE-ECCCCcEEEEEEEEcccccchHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEEEE
Confidence            3689999999999999999999 56788999999986432211 111122222233456888988888888889999999


Q ss_pred             EecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeeccCCCCCcccCC
Q 018699          126 DYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSGPWQDQG  205 (351)
Q Consensus       126 e~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~~~~~~~~~~  205 (351)
                      ||+++++|.+++..    +..+++..++.++.||+.||.|||++||+||||||+||+++                 .++.
T Consensus        85 e~~~~~~L~~~l~~----~~~~~~~~~~~i~~qi~~aL~~LH~~givH~Dlkp~NIll~-----------------~~~~  143 (323)
T 3tki_A           85 EYCSGGELFDRIEP----DIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLD-----------------ERDN  143 (323)
T ss_dssp             ECCTTEEGGGGSBT----TTBCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEC-----------------TTCC
T ss_pred             EcCCCCcHHHHHhh----cCCCCHHHHHHHHHHHHHHHHHHHHCCccccccchHHEEEe-----------------CCCC
Confidence            99999999998876    46799999999999999999999999999999999999999                 7788


Q ss_pred             eEEeecCCccccccCCCCccccccccCCCcccceeccCCCC-CccchHhHHHHHHHHHHhCccccccccCCCCCceee--
Q 018699          206 LCLVDWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQEKKPW-KFQVDTYGLCAIVHMMLHNSYMEIEKKASPDGGLVY--  282 (351)
Q Consensus       206 ~~l~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~-~~~~DiwslG~il~~l~~g~~p~~~~~~~~~~~~~~--  282 (351)
                      ++|+|||++................||+.|+|||++.+..+ +.++|||||||++|+|++|..||.............  
T Consensus       144 ~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~~~  223 (323)
T 3tki_A          144 LKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKE  223 (323)
T ss_dssp             EEECCCTTCEECEETTEECCBCSCCSCGGGSCHHHHHCSSBCHHHHHHHHHHHHHHHHHHSSCSCSSSCTTSHHHHHHHT
T ss_pred             EEEEEeeccceeccCCcccccCCCccCcCccCcHHhccCCCCCCcccHHHHHHHHHHHHhCCCCCCCCchHHHHHHHHhc
Confidence            99999999865432222233445679999999999987765 688999999999999999999997544321100000  


Q ss_pred             -ecCcchhhhhHHHHHHHHHHHHhcCCCCCChHHHHHHHHHHH
Q 018699          283 -LPKLSFKRYWKVELWKSLFTNLLNMSSGNDKEVLQNLQKSFQ  324 (351)
Q Consensus       283 -~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~~~~~  324 (351)
                       ..........+ +.+.+||.+||..||.+|||+.|+++|+|.
T Consensus       224 ~~~~~~~~~~~~-~~~~~li~~~L~~dP~~R~t~~eil~h~~~  265 (323)
T 3tki_A          224 KKTYLNPWKKID-SAPLALLHKILVENPSARITIPDIKKDRWY  265 (323)
T ss_dssp             TCTTSTTGGGSC-HHHHHHHHHHSCSSTTTSCCHHHHTTCTTT
T ss_pred             ccccCCccccCC-HHHHHHHHHHccCChhhCcCHHHHhhChhh
Confidence             01111112233 788999999999999999999999999874

>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B*

Probab=100.00  E-value=1.1e-44  Score=335.91  Aligned_cols=264  Identities=13%  Similarity=0.123  Sum_probs=202.9

Q ss_pred             eEEEEcCeeEEEEEEeecc--CceEEEEEEecCCCCceEEEEecCCCCChH--HHHHHHHHhhhccccccccccceeeec
Q 018699           41 KTIEIGGKKYQIKGCAGQG--GFAKVFKAYVNGDPEDVVALKIQKPAFPWE--FYMYRQLDQRISGRERSSFGFAHRIHL  116 (351)
Q Consensus        41 ~~~~i~~~~Y~i~~~lg~G--~~g~V~~a~~~~~~~~~vaiK~~~~~~~~e--~~~~~~~~~~~~~~~~~~~~~~~~~~~  116 (351)
                      +++...+++|++.+.||+|  +||+||+|+ +..+|+.||||++.......  ...+...........|++++.+..++.
T Consensus        18 s~~~~~~~~y~~~~~lG~G~~~~g~V~~~~-~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~   96 (389)
T 3gni_B           18 SSFLPEGGCYELLTVIGKGFEDLMTVNLAR-YKPTGEYVTVRRINLEACSNEMVTFLQGELHVSKLFNHPNIVPYRATFI   96 (389)
T ss_dssp             CCCCCCGGGEEEEEEEEEETTTTEEEEEEE-ETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEE
T ss_pred             hcccCCCCcEEEEecccCCcCCceEEEEEE-EcCCCCEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCCCcEeEEEE
Confidence            4455668999999999999  999999999 56789999999987543222  222222333344557889999999888


Q ss_pred             ccCeeEEEEEecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeeccC
Q 018699          117 YSDYSILVCDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHD  196 (351)
Q Consensus       117 ~~~~~~lv~e~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~  196 (351)
                      .++..|+||||+++++|.+++....  ...+++..++.++.||+.||.|||++||+||||||+||+++            
T Consensus        97 ~~~~~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~~~qi~~~l~~LH~~~ivHrDlkp~NIll~------------  162 (389)
T 3gni_B           97 ADNELWVVTSFMAYGSAKDLICTHF--MDGMNELAIAYILQGVLKALDYIHHMGYVHRSVKASHILIS------------  162 (389)
T ss_dssp             ETTEEEEEEECCTTCBHHHHHHHTC--TTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEC------------
T ss_pred             ECCEEEEEEEccCCCCHHHHHhhhc--ccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEc------------
Confidence            8999999999999999999998742  35689999999999999999999999999999999999999            


Q ss_pred             CCCCcccCCeEEeecCCccccccCCC-----CccccccccCCCcccceeccC--CCCCccchHhHHHHHHHHHHhCcccc
Q 018699          197 RSGPWQDQGLCLVDWGRGIDLHLFPD-----NMEFEGDCRTSGFRCIEMQEK--KPWKFQVDTYGLCAIVHMMLHNSYME  269 (351)
Q Consensus       197 ~~~~~~~~~~~l~Dfg~a~~~~~~~~-----~~~~~~~~g~~~y~aPE~~~~--~~~~~~~DiwslG~il~~l~~g~~p~  269 (351)
                           .++.++|+|||.+........     ........||+.|+|||++.+  ..++.++|||||||++|+|++|..||
T Consensus       163 -----~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf  237 (389)
T 3gni_B          163 -----VDGKVYLSGLRSNLSMISHGQRQRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPF  237 (389)
T ss_dssp             -----TTCCEEECCGGGCEECEETTEECSCBCCCCTTCTTTGGGSCHHHHSTTSSCBCTHHHHHHHHHHHHHHHHSSCTT
T ss_pred             -----CCCCEEEcccccceeeccccccccccccccccccccccccCHHHHhccCCCCCcHhHHHHHHHHHHHHHHCCCCC
Confidence                 778899999998754321111     111223468899999999987  67899999999999999999999999


Q ss_pred             ccccCCCCC------cee----------------------------------------eecCcchhhhhHHHHHHHHHHH
Q 018699          270 IEKKASPDG------GLV----------------------------------------YLPKLSFKRYWKVELWKSLFTN  303 (351)
Q Consensus       270 ~~~~~~~~~------~~~----------------------------------------~~~~~~~~~~~~~~~~~~li~~  303 (351)
                      .........      ...                                        ..+..+.+..++ +.+.+||.+
T Consensus       238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s-~~~~~li~~  316 (389)
T 3gni_B          238 KDMPATQMLLEKLNGTVPCLLDTSTIPAEELTMSPSRSVANSGLSDSLTTSTPRPSNGDSPSHPYHRTFS-PHFHHFVEQ  316 (389)
T ss_dssp             TTCCSTTHHHHC--------------------------------------------------------CC-HHHHHHHHH
T ss_pred             CCCCHHHHHHHHhcCCCCccccccccccccccccccccccccccccccccCccccccCCCCCCccccccC-HHHHHHHHH
Confidence            754332100      000                                        000111222334 779999999


Q ss_pred             HhcCCCCCChHHHHHHHHHHHH
Q 018699          304 LLNMSSGNDKEVLQNLQKSFQD  325 (351)
Q Consensus       304 ~L~~dP~~R~s~~e~l~~~~~~  325 (351)
                      ||++||++|||+.|+|+|||..
T Consensus       317 ~L~~dP~~Rpta~ell~hp~f~  338 (389)
T 3gni_B          317 CLQRNPDARPSASTLLNHSFFK  338 (389)
T ss_dssp             HTCSCTTTSCCHHHHTTSGGGG
T ss_pred             HhhcCcccCCCHHHHhcCHHHH
Confidence            9999999999999999998744

>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ...

Probab=100.00  E-value=1e-44  Score=321.08  Aligned_cols=257  Identities=19%  Similarity=0.185  Sum_probs=201.7

Q ss_pred             cCeeEEEEEEeeccCceEEEEEEecCCCCceEEEEecCCCCChH---HHHHHHHHhhhccccccccccceeeecccCeeE
Q 018699           46 GGKKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFPWE---FYMYRQLDQRISGRERSSFGFAHRIHLYSDYSI  122 (351)
Q Consensus        46 ~~~~Y~i~~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~~~e---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  122 (351)
                      ..++|++.+.||+|+||+||+|. +..+++.||+|++.......   ...+...........|++++.+..++...+..+
T Consensus         7 ~~~~y~~~~~lg~G~~g~V~~~~-~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~   85 (279)
T 3fdn_A            7 ALEDFEIGRPLGKGKFGNVYLAR-EKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVY   85 (279)
T ss_dssp             CGGGEEEEEEEEECSSEEEEEEE-ETTTCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEE
T ss_pred             ecccEEEeeEEecCCCeEEEEEE-EccCCcEEEEEEEeccccchhhHHHHHHHHHHHHHcCCCCCCcchhheEecCCEEE
Confidence            45789999999999999999999 56788999999986432111   111222223344556888999888888889999


Q ss_pred             EEEEecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeeccCCCCCcc
Q 018699          123 LVCDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSGPWQ  202 (351)
Q Consensus       123 lv~e~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~~~~~~~  202 (351)
                      +||||+++++|.+++...    ..+++..++.++.|++.|+.|||++||+|+||+|+||+++                 .
T Consensus        86 lv~e~~~~~~l~~~l~~~----~~~~~~~~~~~~~qi~~~l~~LH~~~i~H~dlkp~Nili~-----------------~  144 (279)
T 3fdn_A           86 LILEYAPLGTVYRELQKL----SKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLG-----------------S  144 (279)
T ss_dssp             EEECCCTTEEHHHHHHHH----SSCCHHHHHHHHHHHHHHHHHHHTTTCEECCCCGGGEEEC-----------------T
T ss_pred             EEEecCCCCcHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHhCCEecccCChHhEEEc-----------------C
Confidence            999999999999999874    6799999999999999999999999999999999999999                 7


Q ss_pred             cCCeEEeecCCccccccCCCCccccccccCCCcccceeccCCCCCccchHhHHHHHHHHHHhCccccccccCCCCCceee
Q 018699          203 DQGLCLVDWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQEKKPWKFQVDTYGLCAIVHMMLHNSYMEIEKKASPDGGLVY  282 (351)
Q Consensus       203 ~~~~~l~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~p~~~~~~~~~~~~~~  282 (351)
                      ++.++|+|||++....    ........|++.|+|||++.+..++.++||||||+++|+|++|..||.............
T Consensus       145 ~~~~~l~Dfg~~~~~~----~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~  220 (279)
T 3fdn_A          145 AGELKIADFGWSVHAP----SSRRTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRIS  220 (279)
T ss_dssp             TSCEEECSCCEESCC------------CCCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHH
T ss_pred             CCCEEEEeccccccCC----cccccccCCCCCccCHhHhccCCCCccchhHhHHHHHHHHHHCCCCCCCCcHHHHHHHHH
Confidence            7889999999875322    223345578999999999999889999999999999999999999997543221111111


Q ss_pred             ecCcchhhhhHHHHHHHHHHHHhcCCCCCChHHHHHHHHHHHHHHhh
Q 018699          283 LPKLSFKRYWKVELWKSLFTNLLNMSSGNDKEVLQNLQKSFQDYLCS  329 (351)
Q Consensus       283 ~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~~~~~~~~~~  329 (351)
                      ......+..++ +.+.+||.+||..||.+||++.|+++|||..-...
T Consensus       221 ~~~~~~~~~~~-~~~~~li~~~l~~~p~~Rps~~e~l~h~~~~~~~~  266 (279)
T 3fdn_A          221 RVEFTFPDFVT-EGARDLISRLLKHNPSQRPMLREVLEHPWITANSS  266 (279)
T ss_dssp             HTCCCCCTTSC-HHHHHHHHHHCCSSGGGSCCHHHHHHCHHHHHHCS
T ss_pred             hCCCCCCCcCC-HHHHHHHHHHhccChhhCCCHHHHhhCccccCCcc
Confidence            22233344445 78999999999999999999999999998655443

>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp}

Probab=100.00  E-value=9.4e-44  Score=317.35  Aligned_cols=260  Identities=18%  Similarity=0.162  Sum_probs=200.6

Q ss_pred             CeeEEEEEEeeccCceEEEEEEecCCCCceEEEEecCCCCChHHH---HHHHHHhhhccccccccccceeeecccCeeEE
Q 018699           47 GKKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFPWEFY---MYRQLDQRISGRERSSFGFAHRIHLYSDYSIL  123 (351)
Q Consensus        47 ~~~Y~i~~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~~~e~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  123 (351)
                      .++|++.+.||+|+||+||+|+ +..+++.||+|++.........   .+...........|++++.+..+...++..|+
T Consensus        10 ~~~y~i~~~lg~G~~g~V~~~~-~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~l   88 (294)
T 4eqm_A           10 NERYKIVDKLGGGGMSTVYLAE-DTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVSMIDVDEEDDCYYL   88 (294)
T ss_dssp             ETTEEEEEEEEEETTEEEEEEE-ETTTCSEEEEEEEECCSSCCHHHHHHHHHHHHHHTTCCBTTBCCEEEEEECSSEEEE
T ss_pred             hccEEEEEEEccCCCEEEEEEE-ECCCCCeEEEEEeccCccccHHHHHHHHHHHHHHhcCCCCCCceEEEeeeeCCeEEE
Confidence            5789999999999999999999 5778899999997654332222   22222333455678899999998888899999


Q ss_pred             EEEecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeeccCCCCCccc
Q 018699          124 VCDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSGPWQD  203 (351)
Q Consensus       124 v~e~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~~~~~~~~  203 (351)
                      ||||+++++|.+++...    .++++..++.++.|++.|+.|||++||+||||||+||+++                 .+
T Consensus        89 v~e~~~g~~L~~~l~~~----~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~Dlkp~Nil~~-----------------~~  147 (294)
T 4eqm_A           89 VMEYIEGPTLSEYIESH----GPLSVDTAINFTNQILDGIKHAHDMRIVHRDIKPQNILID-----------------SN  147 (294)
T ss_dssp             EEECCCSCBHHHHHHHH----CSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEC-----------------TT
T ss_pred             EEeCCCCCCHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEC-----------------CC
Confidence            99999999999999874    6799999999999999999999999999999999999999                 77


Q ss_pred             CCeEEeecCCccccccCCCCccccccccCCCcccceeccCCCCCccchHhHHHHHHHHHHhCccccccccCCCC-----C
Q 018699          204 QGLCLVDWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQEKKPWKFQVDTYGLCAIVHMMLHNSYMEIEKKASPD-----G  278 (351)
Q Consensus       204 ~~~~l~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~p~~~~~~~~~-----~  278 (351)
                      +.++|+|||++...... .........||+.|+|||++.+..++.++||||||+++|+|++|..||........     .
T Consensus       148 ~~~kl~Dfg~~~~~~~~-~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~  226 (294)
T 4eqm_A          148 KTLKIFDFGIAKALSET-SLTQTNHVLGTVQYFSPEQAKGEATDECTDIYSIGIVLYEMLVGEPPFNGETAVSIAIKHIQ  226 (294)
T ss_dssp             SCEEECCCSSSTTC--------------CCSSCCHHHHHTCCCCTTHHHHHHHHHHHHHHHSSCSSCSSCHHHHHHHHHS
T ss_pred             CCEEEEeCCCccccccc-cccccCccccCccccCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhh
Confidence            88999999998653311 11223345689999999999999999999999999999999999999975442200     0


Q ss_pred             ceeeecCcchhhhhHHHHHHHHHHHHhcCCCCCChHHHHHHHHHHHHHHhhC
Q 018699          279 GLVYLPKLSFKRYWKVELWKSLFTNLLNMSSGNDKEVLQNLQKSFQDYLCSN  330 (351)
Q Consensus       279 ~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~~~~~~~~~~~  330 (351)
                      ..........+...+ +.+.++|.+||.+||.+||++.+.+.+.|+..+...
T Consensus       227 ~~~~~~~~~~~~~~~-~~l~~li~~~l~~dp~~R~~~~~~l~~~l~~~~~~~  277 (294)
T 4eqm_A          227 DSVPNVTTDVRKDIP-QSLSNVILRATEKDKANRYKTIQEMKDDLSSVLHEN  277 (294)
T ss_dssp             SCCCCHHHHSCTTSC-HHHHHHHHHHSCSSGGGSCSSHHHHHHHHHTSSSSS
T ss_pred             ccCCCcchhcccCCC-HHHHHHHHHHhcCCHhHccccHHHHHHHHHHHHhhc
Confidence            000000011112233 789999999999999999999999999988776544

>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}

Probab=100.00  E-value=2.8e-44  Score=327.73  Aligned_cols=259  Identities=18%  Similarity=0.189  Sum_probs=192.0

Q ss_pred             eEEEEcCeeEEEEEEeeccCceEEEEEEecCCCCceEEEEecCCCCChHH--HHHHHHHhhhcccc--ccccccceeeec
Q 018699           41 KTIEIGGKKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFPWEF--YMYRQLDQRISGRE--RSSFGFAHRIHL  116 (351)
Q Consensus        41 ~~~~i~~~~Y~i~~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~~~e~--~~~~~~~~~~~~~~--~~~~~~~~~~~~  116 (351)
                      ..+++.+++|++.+.||+|+||+||+|.+  .+++.||||++........  ..+......+....  +++++.+..+..
T Consensus         2 e~i~~~~~~y~i~~~lG~G~~g~Vy~~~~--~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~   79 (343)
T 3dbq_A            2 ECISVKGRIYSILKQIGSGGSSKVFQVLN--EKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEI   79 (343)
T ss_dssp             CCEESSSCEEEEEEEESCCSSEEEEEEEC--TTSCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEE
T ss_pred             ceeeeecCEEEEEEEEecCCCeEEEEEEe--CCCCEEEEEEeeccccchHHHHHHHHHHHHHHhhhhcCCceEEEeeeEe
Confidence            45678899999999999999999999984  4588999999875533221  11111111122222  267888888888


Q ss_pred             ccCeeEEEEEecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeeccC
Q 018699          117 YSDYSILVCDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHD  196 (351)
Q Consensus       117 ~~~~~~lv~e~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~  196 (351)
                      .++..|+|||+ .+++|.+++..    ...+++..++.++.||+.||.|||++||+||||||+||+++            
T Consensus        80 ~~~~~~lv~e~-~~~~L~~~l~~----~~~~~~~~~~~i~~qi~~al~~lH~~~iiHrDikp~NIll~------------  142 (343)
T 3dbq_A           80 TDQYIYMVMEC-GNIDLNSWLKK----KKSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIV------------  142 (343)
T ss_dssp             CSSEEEEEECC-CSEEHHHHHHH----SCCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEE------------
T ss_pred             eCCEEEEEEeC-CCCCHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCcceEEEE------------
Confidence            88999999995 48899999987    57899999999999999999999999999999999999997            


Q ss_pred             CCCCcccCCeEEeecCCccccccCCCCccccccccCCCcccceeccC-----------CCCCccchHhHHHHHHHHHHhC
Q 018699          197 RSGPWQDQGLCLVDWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQEK-----------KPWKFQVDTYGLCAIVHMMLHN  265 (351)
Q Consensus       197 ~~~~~~~~~~~l~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~-----------~~~~~~~DiwslG~il~~l~~g  265 (351)
                            ++.++|+|||++................||+.|+|||++.+           ..++.++|||||||++|+|++|
T Consensus       143 ------~~~~kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g  216 (343)
T 3dbq_A          143 ------DGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYG  216 (343)
T ss_dssp             ------TTEEEECCCSSSCCC------------CCCCSSCCHHHHHHCC-----------CCHHHHHHHHHHHHHHHHHS
T ss_pred             ------CCcEEEeecccccccCcccccccCCCCcCCcCcCCHHHHhhccccccccccccCCCchhhHHHHHHHHHHHHhC
Confidence                  24599999999975432222222345679999999999864           6678999999999999999999


Q ss_pred             ccccccccCCCC---CceeeecCcchhhhhHHHHHHHHHHHHhcCCCCCChHHHHHHHHHHHH
Q 018699          266 SYMEIEKKASPD---GGLVYLPKLSFKRYWKVELWKSLFTNLLNMSSGNDKEVLQNLQKSFQD  325 (351)
Q Consensus       266 ~~p~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~~~~~~  325 (351)
                      ..||........   ...........+...+ +.+.+||.+||..||.+|||+.|+++|||..
T Consensus       217 ~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~l~~li~~~L~~dp~~Rpt~~e~l~hp~~~  278 (343)
T 3dbq_A          217 KTPFQQIINQISKLHAIIDPNHEIEFPDIPE-KDLQDVLKCCLKRDPKQRISIPELLAHPYVQ  278 (343)
T ss_dssp             SCTTTTCCSHHHHHHHHHCTTSCCCCCCCSC-HHHHHHHHHHTCSSTTTSCCHHHHHTSHHHH
T ss_pred             CCcchhhhhHHHHHHHHhcCCcccCCcccCC-HHHHHHHHHHcCCChhHCCCHHHHHhCcccc
Confidence            999964322100   0000011122233333 7889999999999999999999999999865

>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A*

Probab=100.00  E-value=3e-44  Score=317.64  Aligned_cols=254  Identities=16%  Similarity=0.149  Sum_probs=200.5

Q ss_pred             CeeEEEEEEeeccCceEEEEEEecCCCCceEEEEecCCCCChHHHHHHHHHhhhccccccccccceeeecccCeeEEEEE
Q 018699           47 GKKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFPWEFYMYRQLDQRISGRERSSFGFAHRIHLYSDYSILVCD  126 (351)
Q Consensus        47 ~~~Y~i~~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e  126 (351)
                      .++|++.+.||+|+||+||+|. +..++..||+|++........+.+...........|++++.+..++..++..++|||
T Consensus         8 ~~~y~~~~~lg~G~~g~V~~~~-~~~~~~~~a~k~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e   86 (277)
T 3f3z_A            8 NQYYTLENTIGRGSWGEVKIAV-QKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNIIRLYETFEDNTDIYLVME   86 (277)
T ss_dssp             HHHEEEEEEEEEETTEEEEEEE-ETTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEE
T ss_pred             hhhEEeeeEEeecCCEEEEEEE-eCCCCcEEEEEeehhhccchHHHHHHHHHHHHhCCCCCEeeEEEEEecCCeEEEEEe
Confidence            4789999999999999999999 567788999999875433333333333344455578899999988888899999999


Q ss_pred             ecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeeccCCCCCcccCCe
Q 018699          127 YLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSGPWQDQGL  206 (351)
Q Consensus       127 ~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~~~~~~~~~~~  206 (351)
                      |+++++|.+++..    +..+++..++.++.|++.|+.|||++||+|+||+|+||++..++              .++.+
T Consensus        87 ~~~~~~L~~~~~~----~~~~~~~~~~~i~~~i~~~l~~lH~~~i~H~dlkp~Nil~~~~~--------------~~~~~  148 (277)
T 3f3z_A           87 LCTGGELFERVVH----KRVFRESDAARIMKDVLSAVAYCHKLNVAHRDLKPENFLFLTDS--------------PDSPL  148 (277)
T ss_dssp             CCCSCBHHHHHHH----HCSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESSSS--------------TTCCE
T ss_pred             ccCCCcHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHCCccCCCCCHHHEEEecCC--------------CCCcE
Confidence            9999999999887    36799999999999999999999999999999999999994322              56789


Q ss_pred             EEeecCCccccccCCCCccccccccCCCcccceeccCCCCCccchHhHHHHHHHHHHhCccccccccCCCCCceeeecCc
Q 018699          207 CLVDWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQEKKPWKFQVDTYGLCAIVHMMLHNSYMEIEKKASPDGGLVYLPKL  286 (351)
Q Consensus       207 ~l~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~  286 (351)
                      +|+|||++....   .........||+.|+|||++.+. ++.++||||||+++|+|++|..||.................
T Consensus       149 ~l~Dfg~~~~~~---~~~~~~~~~~t~~y~aPE~~~~~-~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~  224 (277)
T 3f3z_A          149 KLIDFGLAARFK---PGKMMRTKVGTPYYVSPQVLEGL-YGPECDEWSAGVMMYVLLCGYPPFSAPTDSEVMLKIREGTF  224 (277)
T ss_dssp             EECCCTTCEECC---TTSCBCCCCSCTTTCCHHHHTTC-BCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCC
T ss_pred             EEEecccceecc---CccchhccCCCCCccChHHhccc-CCchhhehhHHHHHHHHHHCCCCCCCCCHHHHHHHHHhCCC
Confidence            999999986533   23334556789999999998765 78999999999999999999999975432210000011111


Q ss_pred             chhh----hhHHHHHHHHHHHHhcCCCCCChHHHHHHHHHHH
Q 018699          287 SFKR----YWKVELWKSLFTNLLNMSSGNDKEVLQNLQKSFQ  324 (351)
Q Consensus       287 ~~~~----~~~~~~~~~li~~~L~~dP~~R~s~~e~l~~~~~  324 (351)
                      ..+.    ..+ +.+.+||.+||++||.+||++.++|+|+|.
T Consensus       225 ~~~~~~~~~~~-~~~~~li~~~l~~dp~~R~s~~~~l~h~~~  265 (277)
T 3f3z_A          225 TFPEKDWLNVS-PQAESLIRRLLTKSPKQRITSLQALEHEWF  265 (277)
T ss_dssp             CCCHHHHTTSC-HHHHHHHHHHTCSSTTTSCCHHHHTTSHHH
T ss_pred             CCCchhhhcCC-HHHHHHHHHHccCChhhCcCHHHHhcCHHH
Confidence            1111    223 789999999999999999999999998764

>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A*

Probab=100.00  E-value=2.1e-44  Score=324.17  Aligned_cols=260  Identities=15%  Similarity=0.161  Sum_probs=195.0

Q ss_pred             CeeEEEEEEeeccCceEEEEEEecCCCCceEEEEecCCCCChHHHHHH---HHHhhhccccccccccceeeecccC----
Q 018699           47 GKKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFPWEFYMYR---QLDQRISGRERSSFGFAHRIHLYSD----  119 (351)
Q Consensus        47 ~~~Y~i~~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~~~e~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~----  119 (351)
                      .++|++.+.||+|+||+||+|+ +..+++.||+|++............   ..........|++++.+..+.....    
T Consensus        11 ~~~y~~~~~lg~G~~g~V~~~~-~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~   89 (311)
T 3ork_A           11 SDRYELGEILGFGGMSEVHLAR-DLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGP   89 (311)
T ss_dssp             TTTEEEEEEEEECSSEEEEEEE-ETTTTEEEEEEEECTTTTTSHHHHHHHHHHHTTCCCCCCTTBCCEEEEEEEEETTEE
T ss_pred             cCcEEEEEEEccCCCEEEEEEE-ECCCCceEEEEEeCccccCCHHHHHHHHHHHHHHHcCCCCCcceEEEeeeccCCCCc
Confidence            5789999999999999999999 5678999999999876443322222   2233344557788888776654432    


Q ss_pred             eeEEEEEecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeeccCCCC
Q 018699          120 YSILVCDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSG  199 (351)
Q Consensus       120 ~~~lv~e~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~~~~  199 (351)
                      ..|+||||+++++|.+++...    ..+++..++.++.|++.||.|||++||+|+||||+||+++               
T Consensus        90 ~~~lv~e~~~g~~L~~~l~~~----~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~~---------------  150 (311)
T 3ork_A           90 LPYIVMEYVDGVTLRDIVHTE----GPMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANIMIS---------------  150 (311)
T ss_dssp             EEEEEEECCCEEEHHHHHHHH----CSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEE---------------
T ss_pred             ccEEEEecCCCCCHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHHCCCCcCCCCHHHEEEc---------------
Confidence            459999999999999999873    6799999999999999999999999999999999999999               


Q ss_pred             CcccCCeEEeecCCccccccCCCC-ccccccccCCCcccceeccCCCCCccchHhHHHHHHHHHHhCccccccccCCCCC
Q 018699          200 PWQDQGLCLVDWGRGIDLHLFPDN-MEFEGDCRTSGFRCIEMQEKKPWKFQVDTYGLCAIVHMMLHNSYMEIEKKASPDG  278 (351)
Q Consensus       200 ~~~~~~~~l~Dfg~a~~~~~~~~~-~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~p~~~~~~~~~~  278 (351)
                        .++.++|+|||++......... .......||+.|+|||++.+..++.++|||||||++|+|++|..||.........
T Consensus       151 --~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~  228 (311)
T 3ork_A          151 --ATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVA  228 (311)
T ss_dssp             --TTSCEEECCCSCC------------------CCTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHH
T ss_pred             --CCCCEEEeeccCcccccccccccccccccCcCcccCCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHHHH
Confidence              7788999999998654322111 2233456899999999999999999999999999999999999999754322100


Q ss_pred             cee----eecCcchhhhhHHHHHHHHHHHHhcCCCCCChHHHHHHHHHHHHHHhh
Q 018699          279 GLV----YLPKLSFKRYWKVELWKSLFTNLLNMSSGNDKEVLQNLQKSFQDYLCS  329 (351)
Q Consensus       279 ~~~----~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~~~~~~~~~~  329 (351)
                      ...    ..+.......++ +.+.+||.+||+.||.+||++.+++.++|......
T Consensus       229 ~~~~~~~~~~~~~~~~~~~-~~l~~li~~~l~~dP~~R~~~~~~l~~~l~~~~~~  282 (311)
T 3ork_A          229 YQHVREDPIPPSARHEGLS-ADLDAVVLKALAKNPENRYQTAAEMRADLVRVHNG  282 (311)
T ss_dssp             HHHHHCCCCCHHHHSTTCC-HHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHHHTT
T ss_pred             HHHhcCCCCCcccccCCCC-HHHHHHHHHHHhcCHhhChhhHHHHHHHHHHHhcC
Confidence            000    001111112233 78999999999999999999999999998776543

>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A

Probab=100.00  E-value=1.6e-44  Score=321.21  Aligned_cols=265  Identities=15%  Similarity=0.123  Sum_probs=196.2

Q ss_pred             EEEcCeeEEEEEEeeccCceEEEEEEecCCCCceEEEEecCCCCChH--HHHHHHHHhhhccccccccccceeeecccCe
Q 018699           43 IEIGGKKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFPWE--FYMYRQLDQRISGRERSSFGFAHRIHLYSDY  120 (351)
Q Consensus        43 ~~i~~~~Y~i~~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~~~e--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  120 (351)
                      +++..++|++.+.||+|+||+||+|+ +..+++.||+|++.......  .....+.........|++++....+...++.
T Consensus         2 ~~i~~~~y~~~~~lg~G~~g~V~~~~-~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~iv~~~~~~~~~~~   80 (290)
T 3fme_A            2 MEVKADDLEPIMELGRGAYGVVEKMR-HVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFREGD   80 (290)
T ss_dssp             CCCCGGGEEEEEEEEECSSEEEEEEE-ETTTTEEEEEEEEC---CHHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSS
T ss_pred             CcccHHhhhhHHhcCCCCCeEEEEEE-ecCCCeEEEEEEeecccCcHHHHHHHHHHHHHHHhCCCCeEEEEeeeeeccCC
Confidence            35667899999999999999999999 56788999999987654332  2233333334556678899998888888889


Q ss_pred             eEEEEEecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHC-CceecCCCCCcEEEeecCCcceeeccCCCC
Q 018699          121 SILVCDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDV-GIIHGDFKPDNLLIRYARDELTVLDHDRSG  199 (351)
Q Consensus       121 ~~lv~e~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~-~i~H~dl~p~Nill~~~~~~~~~~~~~~~~  199 (351)
                      .++||||++ ++|.+++......+..+++..++.++.|++.|+.|||++ ||+|+||||+||+++               
T Consensus        81 ~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~i~H~dlkp~Nil~~---------------  144 (290)
T 3fme_A           81 VWICMELMD-TSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKLSVIHRDVKPSNVLIN---------------  144 (290)
T ss_dssp             EEEEEECCS-EEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHHSCCCCCCCSGGGCEEC---------------
T ss_pred             EEEEEehhc-cchHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCeecCCCCHHHEEEC---------------
Confidence            999999995 599888877655567899999999999999999999998 999999999999999               


Q ss_pred             CcccCCeEEeecCCccccccCCCCccccccccCCCcccceec----cCCCCCccchHhHHHHHHHHHHhCccccccccCC
Q 018699          200 PWQDQGLCLVDWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQ----EKKPWKFQVDTYGLCAIVHMMLHNSYMEIEKKAS  275 (351)
Q Consensus       200 ~~~~~~~~l~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~----~~~~~~~~~DiwslG~il~~l~~g~~p~~~~~~~  275 (351)
                        .++.++|+|||++.....   ........||+.|+|||++    .+..++.++|||||||++|+|++|..||......
T Consensus       145 --~~~~~kl~Dfg~~~~~~~---~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~  219 (290)
T 3fme_A          145 --ALGQVKMCDFGISGYLVD---DVAKDIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTP  219 (290)
T ss_dssp             --TTCCEEBCCC------------------CCCCCCSCHHHHSCCTTC--CCHHHHHHHHHHHHHHHHHTSCSSCCCSCH
T ss_pred             --CCCCEEEeecCCcccccc---cccccccCCCccccChhhcChhhcCcCCCcHHHHHHHHHHHHHHHHCCCCccccCch
Confidence              677899999999864321   2223334689999999996    5567889999999999999999999999642211


Q ss_pred             CC--CceeeecCcc-hhhhhHHHHHHHHHHHHhcCCCCCChHHHHHHHHHHHHHHhhC
Q 018699          276 PD--GGLVYLPKLS-FKRYWKVELWKSLFTNLLNMSSGNDKEVLQNLQKSFQDYLCSN  330 (351)
Q Consensus       276 ~~--~~~~~~~~~~-~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~~~~~~~~~~~  330 (351)
                      ..  .......... .+..++ +.+.+||.+||+.||++|||+.|+++|||.......
T Consensus       220 ~~~~~~~~~~~~~~~~~~~~~-~~~~~li~~~l~~~p~~Rpt~~e~l~hp~f~~~~~~  276 (290)
T 3fme_A          220 FQQLKQVVEEPSPQLPADKFS-AEFVDFTSQCLKKNSKERPTYPELMQHPFFTLHESK  276 (290)
T ss_dssp             HHHHHHHHHSCCCCCCTTTSC-HHHHHHHHHHTCSSGGGSCCHHHHTTSHHHHHHHHS
T ss_pred             HHHHHHHhccCCCCcccccCC-HHHHHHHHHHhhcChhhCcCHHHHHhCcccccCccc
Confidence            00  0000001111 112234 789999999999999999999999999986644433

>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens}

Probab=100.00  E-value=2.7e-44  Score=318.02  Aligned_cols=253  Identities=17%  Similarity=0.211  Sum_probs=181.3

Q ss_pred             eeEEEEEEeeccCceEEEEEEecCCCCceEEEEecCCCCChH---HHHHHHHHhhhccccccccccceeeecccCeeEEE
Q 018699           48 KKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFPWE---FYMYRQLDQRISGRERSSFGFAHRIHLYSDYSILV  124 (351)
Q Consensus        48 ~~Y~i~~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~~~e---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv  124 (351)
                      ++|++.+.||+|+||+||+|. +..+++.||+|++.......   ...+...........|++++....+....+..++|
T Consensus        11 ~~y~~~~~lg~G~~g~Vy~~~-~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv   89 (278)
T 3cok_A           11 EDFKVGNLLGKGSFAGVYRAE-SIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPSILELYNYFEDSNYVYLV   89 (278)
T ss_dssp             GGEEEEEEEEECSSEEEEEEE-ETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTBCCTTBCCEEEEEECSSEEEEE
T ss_pred             ccceeeeeecCCCceEEEEEE-EccCCceEEEEEeehhhhhhhhHHHHHHHHHHHHHhCCCCCeEeEEEEEccCCeEEEE
Confidence            579999999999999999999 56778999999986432111   12222222334455788898888888888999999


Q ss_pred             EEecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeeccCCCCCcccC
Q 018699          125 CDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSGPWQDQ  204 (351)
Q Consensus       125 ~e~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~~~~~~~~~  204 (351)
                      |||+++++|.+++...   ...+++..++.++.|++.|+.|||++||+|+||+|+||+++                 .++
T Consensus        90 ~e~~~~~~L~~~l~~~---~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nili~-----------------~~~  149 (278)
T 3cok_A           90 LEMCHNGEMNRYLKNR---VKPFSENEARHFMHQIITGMLYLHSHGILHRDLTLSNLLLT-----------------RNM  149 (278)
T ss_dssp             EECCTTEEHHHHHHTC---SSCCCHHHHHHHHHHHHHHHHHHHHTTEECSSCCGGGEEEC-----------------TTC
T ss_pred             EecCCCCcHHHHHhhc---cCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEc-----------------CCC
Confidence            9999999999999863   46799999999999999999999999999999999999999                 778


Q ss_pred             CeEEeecCCccccccCCCCccccccccCCCcccceeccCCCCCccchHhHHHHHHHHHHhCccccccccCCCCCceeeec
Q 018699          205 GLCLVDWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQEKKPWKFQVDTYGLCAIVHMMLHNSYMEIEKKASPDGGLVYLP  284 (351)
Q Consensus       205 ~~~l~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~p~~~~~~~~~~~~~~~~  284 (351)
                      .++|+|||++......  ........|++.|+|||.+.+..++.++||||||+++|+|++|..||...............
T Consensus       150 ~~kl~dfg~~~~~~~~--~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~  227 (278)
T 3cok_A          150 NIKIADFGLATQLKMP--HEKHYTLCGTPNYISPEIATRSAHGLESDVWSLGCMFYTLLIGRPPFDTDTVKNTLNKVVLA  227 (278)
T ss_dssp             CEEECCCTTCEECC------------------------------CTHHHHHHHHHHHHHHSSCSSCCCSCC-----CCSS
T ss_pred             CEEEEeecceeeccCC--CCcceeccCCCCcCCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCChhHHHHHHHHhhc
Confidence            8999999998654321  12223456899999999999888899999999999999999999999765433221112222


Q ss_pred             CcchhhhhHHHHHHHHHHHHhcCCCCCChHHHHHHHHHHH
Q 018699          285 KLSFKRYWKVELWKSLFTNLLNMSSGNDKEVLQNLQKSFQ  324 (351)
Q Consensus       285 ~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~~~~~  324 (351)
                      ....+...+ ..+.+||.+||..||++||++.++++|||.
T Consensus       228 ~~~~~~~~~-~~~~~li~~~l~~dp~~Rps~~~~l~h~~~  266 (278)
T 3cok_A          228 DYEMPSFLS-IEAKDLIHQLLRRNPADRLSLSSVLDHPFM  266 (278)
T ss_dssp             CCCCCTTSC-HHHHHHHHHHSCSSGGGSCCHHHHTTSTTT
T ss_pred             ccCCccccC-HHHHHHHHHHcccCHhhCCCHHHHhcCccc
Confidence            233444445 789999999999999999999999999863

>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A

Probab=100.00  E-value=9.8e-44  Score=316.82  Aligned_cols=253  Identities=17%  Similarity=0.186  Sum_probs=194.6

Q ss_pred             eeEEEEEEeeccCceEEEEEEecCCCCceEEEEecCCCCChH--HHHHHHHHhhhccccccccccceeeecccCeeEEEE
Q 018699           48 KKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFPWE--FYMYRQLDQRISGRERSSFGFAHRIHLYSDYSILVC  125 (351)
Q Consensus        48 ~~Y~i~~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~~~e--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~  125 (351)
                      ++|++.+.||+|+||+||+|+ +..+++.||+|++......+  ...............|++++.+..++..++..++||
T Consensus         2 ~~y~~~~~lg~G~~g~V~~~~-~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~   80 (292)
T 3o0g_A            2 QKYEKLEKIGEGTYGTVFKAK-NRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVF   80 (292)
T ss_dssp             CSEEEEEEEEECSSSEEEEEE-ETTTCCEEEEEEEESSCSSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEE
T ss_pred             CCceeeeEecCCCCeEEEEEE-ECCCCceEEEEeeeccCCcCCcchHHHHHHHHHhcCCCCCEeeEEeEEEeCCEEEEEE
Confidence            579999999999999999999 57788999999987543322  122222233345557889999999888899999999


Q ss_pred             EecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeeccCCCCCcccCC
Q 018699          126 DYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSGPWQDQG  205 (351)
Q Consensus       126 e~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~~~~~~~~~~  205 (351)
                      ||+. +++.+.+...   +..+++..++.++.|++.|+.|||++||+||||||+||+++                 .++.
T Consensus        81 e~~~-~~l~~~~~~~---~~~l~~~~~~~~~~ql~~~l~~lH~~~ivH~dikp~Nil~~-----------------~~~~  139 (292)
T 3o0g_A           81 EFCD-QDLKKYFDSC---NGDLDPEIVKSFLFQLLKGLGFCHSRNVLHRDLKPQNLLIN-----------------RNGE  139 (292)
T ss_dssp             ECCS-EEHHHHHHHT---TTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEC-----------------TTSC
T ss_pred             ecCC-CCHHHHHHhC---CCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEc-----------------CCCC
Confidence            9995 4676666553   56899999999999999999999999999999999999999                 7788


Q ss_pred             eEEeecCCccccccCCCCccccccccCCCcccceeccCCC-CCccchHhHHHHHHHHHHhCccccccccCCC--------
Q 018699          206 LCLVDWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQEKKP-WKFQVDTYGLCAIVHMMLHNSYMEIEKKASP--------  276 (351)
Q Consensus       206 ~~l~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~-~~~~~DiwslG~il~~l~~g~~p~~~~~~~~--------  276 (351)
                      ++|+|||++.....  .........||+.|+|||++.+.. ++.++|||||||++|+|++|..||.......        
T Consensus       140 ~kl~Dfg~~~~~~~--~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~~~~p~~~~~~~~~~~~~i~~  217 (292)
T 3o0g_A          140 LKLANFGLARAFGI--PVRCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFR  217 (292)
T ss_dssp             EEECCCTTCEECCS--CCSCCCSCCSCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHTTTSCCSCCCSSHHHHHHHHHH
T ss_pred             EEEeecccceecCC--ccccccCCccccCCcChHHHcCCCCcCchHHHHHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHH
Confidence            99999999865431  223344567899999999997765 7999999999999999999988864221100        


Q ss_pred             ------CCce------------e----eecCcchhhhhHHHHHHHHHHHHhcCCCCCChHHHHHHHHHHHH
Q 018699          277 ------DGGL------------V----YLPKLSFKRYWKVELWKSLFTNLLNMSSGNDKEVLQNLQKSFQD  325 (351)
Q Consensus       277 ------~~~~------------~----~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~~~~~~  325 (351)
                            ...+            .    ...........+ +.+++||.+||+.||++|||+.|+++|||..
T Consensus       218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~li~~~L~~dP~~R~t~~e~l~hp~f~  287 (292)
T 3o0g_A          218 LLGTPTEEQWPSMTKLPDYKPYPMYPATTSLVNVVPKLN-ATGRDLLQNLLKCNPVQRISAEEALQHPYFS  287 (292)
T ss_dssp             HHCCCCTTTCTTGGGSTTCCCCCCCCTTCCCTTTSTTCC-HHHHHHHHHHSCSSGGGSCCHHHHHTSGGGT
T ss_pred             HhCCCChhhhhhhcccccccccccccCCcchhhcccccC-hHHHHHHHHHhccChhhCCCHHHHhcCcccc
Confidence                  0000            0    000001111233 7889999999999999999999999998754

>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens}

Probab=100.00  E-value=5.3e-44  Score=320.96  Aligned_cols=258  Identities=18%  Similarity=0.174  Sum_probs=192.6

Q ss_pred             EcCeeEEEEEEeeccCceEEEEEEecCCCCceEEEEecCCCC--------ChHHHHHHHHHhhhccccccccccceeeec
Q 018699           45 IGGKKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAF--------PWEFYMYRQLDQRISGRERSSFGFAHRIHL  116 (351)
Q Consensus        45 i~~~~Y~i~~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~--------~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~  116 (351)
                      +..++|++.+.||+|+||+||+|+ +..+++.||+|++....        .........+...+....|++++.+..++.
T Consensus         6 ~~~~~y~~~~~lg~G~~g~V~~~~-~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~niv~~~~~~~   84 (308)
T 3g33_A            6 MATSRYEPVAEIGVGAYGTVYKAR-DPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLEAFEHPNVVRLMDVCA   84 (308)
T ss_dssp             ----CCEEEEEECCSSSCCEEEEE-CTTTCCEEEEEEEEEECCCTTSSCCCHHHHHHHHHHHHHHHHCCTTBCCEEEEEE
T ss_pred             ccccceEEEEEEecCCCeEEEEEE-ECCCCcEEEEEEEecccccccccccchhHHHHHHHHHHHhhcCCCCeEEeeeeee
Confidence            446899999999999999999999 67789999999976321        112222222233333445788888887765


Q ss_pred             ccC-----eeEEEEEecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcce
Q 018699          117 YSD-----YSILVCDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELT  191 (351)
Q Consensus       117 ~~~-----~~~lv~e~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~  191 (351)
                      ...     ..++||||+. ++|.+++....  ...+++..++.++.|++.||+|||++||+|+||||+||+++       
T Consensus        85 ~~~~~~~~~~~lv~e~~~-~~L~~~~~~~~--~~~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dlkp~Nil~~-------  154 (308)
T 3g33_A           85 TSRTDREIKVTLVFEHVD-QDLRTYLDKAP--PPGLPAETIKDLMRQFLRGLDFLHANCIVHRDLKPENILVT-------  154 (308)
T ss_dssp             ECCSSSEEEEEEEEECCC-CBHHHHHHTCC--TTCSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCTTTEEEC-------
T ss_pred             ccCCCCceeEEEEehhhh-cCHHHHHhhcc--CCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEc-------
Confidence            433     5799999995 69999998742  23489999999999999999999999999999999999998       


Q ss_pred             eeccCCCCCcccCCeEEeecCCccccccCCCCccccccccCCCcccceeccCCCCCccchHhHHHHHHHHHHhCcccccc
Q 018699          192 VLDHDRSGPWQDQGLCLVDWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQEKKPWKFQVDTYGLCAIVHMMLHNSYMEIE  271 (351)
Q Consensus       192 ~~~~~~~~~~~~~~~~l~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~p~~~  271 (351)
                                .++.++|+|||++....   .........||+.|+|||++.+..++.++|||||||++|+|++|..||..
T Consensus       155 ----------~~~~~kl~Dfg~a~~~~---~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~  221 (308)
T 3g33_A          155 ----------SGGTVKLADFGLARIYS---YQMALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCG  221 (308)
T ss_dssp             ----------TTSCEEECSCSCTTTST---TCCCSGGGGCCCSSCCHHHHHTSCCCSTHHHHHHHHHHHHTTTSSCSCCC
T ss_pred             ----------CCCCEEEeeCccccccC---CCcccCCccccccccCchHHcCCCCCchHHHHHHHHHHHHHHhCCCCCCC
Confidence                      77889999999986432   22334556789999999999999999999999999999999999999854


Q ss_pred             ccCCCC-------------Cce-----------eeecCcc---hhhhhHHHHHHHHHHHHhcCCCCCChHHHHHHHHHHH
Q 018699          272 KKASPD-------------GGL-----------VYLPKLS---FKRYWKVELWKSLFTNLLNMSSGNDKEVLQNLQKSFQ  324 (351)
Q Consensus       272 ~~~~~~-------------~~~-----------~~~~~~~---~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~~~~~  324 (351)
                      ......             ..+           .......   .....+ +.+.+||.+||++||++|||+.|+|+|+|.
T Consensus       222 ~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~li~~~L~~dP~~R~t~~e~l~h~~~  300 (308)
T 3g33_A          222 NSEADQLGKIFDLIGLPPEDDWPRDVSLPRGAFPPRGPRPVQSVVPEME-ESGAQLLLEMLTFNPHKRISAFRALQHSYL  300 (308)
T ss_dssp             SSHHHHHHHHHHHHCCCCTTTSCSSCSSCGGGSCCCCCCCHHHHSCSCC-HHHHHHHHHHTCSSTTTSCCHHHHHTSTTC
T ss_pred             CCHHHHHHHHHHHhCCCChhhccchhhccccccCCCCCCcHHHhCcccc-HHHHHHHHHHhcCCCccCCCHHHHhcCccc
Confidence            332100             000           0000000   111123 788999999999999999999999999875


Q ss_pred             HHH
Q 018699          325 DYL  327 (351)
Q Consensus       325 ~~~  327 (351)
                      .--
T Consensus       301 ~~~  303 (308)
T 3g33_A          301 HKD  303 (308)
T ss_dssp             ---
T ss_pred             cCC
Confidence            433

>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens}

Probab=100.00  E-value=2.8e-43  Score=317.85  Aligned_cols=264  Identities=16%  Similarity=0.180  Sum_probs=200.0

Q ss_pred             EEcCeeEEEEEEeeccCceEEEEEEecCCCCceEEEEecCCCCC-hHHHHHHHHHhhhccccccccccceeeeccc--Ce
Q 018699           44 EIGGKKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFP-WEFYMYRQLDQRISGRERSSFGFAHRIHLYS--DY  120 (351)
Q Consensus        44 ~i~~~~Y~i~~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~~-~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~  120 (351)
                      .+.+++|++.+.||+|+||+||+|+ +..+++.||||++..... ............+....+++++.+..+....  ..
T Consensus         5 ~~~~~~y~~~~~lg~G~~g~V~~~~-~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~   83 (319)
T 4euu_A            5 STSNHLWLLSDILGQGATANVFRGR-HKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRH   83 (319)
T ss_dssp             ECSSEEEEEEEEEEECSSEEEEEEE-ETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCC
T ss_pred             cCCCCCEEEEEEecCCCCeEEEEEE-ECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCcceEEEEeecCCCce
Confidence            4567899999999999999999999 567789999999874321 1112222222233444678888887776543  37


Q ss_pred             eEEEEEecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeeccCCCCC
Q 018699          121 SILVCDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSGP  200 (351)
Q Consensus       121 ~~lv~e~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~~~~~  200 (351)
                      .++||||+++++|.+++..... ...+++..++.++.|++.||.|||++||+|+||||+||++...+.            
T Consensus        84 ~~lv~e~~~~~~L~~~l~~~~~-~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~------------  150 (319)
T 4euu_A           84 KVLIMEFCPCGSLYTVLEEPSN-AYGLPESEFLIVLRDVVGGMNHLRENGIVHRNIKPGNIMRVIGED------------  150 (319)
T ss_dssp             EEEEEECCTTCBHHHHHHSGGG-TTCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEEECTT------------
T ss_pred             EEEEEeCCCCCCHHHHHHHhcc-ccCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHEEEeccCC------------
Confidence            8999999999999999987432 234899999999999999999999999999999999999843222            


Q ss_pred             cccCCeEEeecCCccccccCCCCccccccccCCCcccceecc--------CCCCCccchHhHHHHHHHHHHhCccccccc
Q 018699          201 WQDQGLCLVDWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQE--------KKPWKFQVDTYGLCAIVHMMLHNSYMEIEK  272 (351)
Q Consensus       201 ~~~~~~~l~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~--------~~~~~~~~DiwslG~il~~l~~g~~p~~~~  272 (351)
                       ..+.++|+|||++....   .........||+.|+|||++.        +..++.++|||||||++|+|++|..||...
T Consensus       151 -~~~~~kL~Dfg~a~~~~---~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~  226 (319)
T 4euu_A          151 -GQSVYKLTDFGAARELE---DDEQFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPF  226 (319)
T ss_dssp             -SCEEEEECCCTTCEECC---TTCCBCCCCSCGGGCCHHHHHHHTSCCCCCCCBCTTHHHHHHHHHHHHHHHSSCSEECT
T ss_pred             -CCceEEEccCCCceecC---CCCceeecccCCCccCHHHhhhccccccccCCCCcHHHHHHHHHHHHHHHhCCCCCCCC
Confidence             55679999999996543   223344567899999999985        567889999999999999999999999632


Q ss_pred             cCCC-------------------------CCceee----ecCcchhhhhHHHHHHHHHHHHhcCCCCCChHHHHHHHHHH
Q 018699          273 KASP-------------------------DGGLVY----LPKLSFKRYWKVELWKSLFTNLLNMSSGNDKEVLQNLQKSF  323 (351)
Q Consensus       273 ~~~~-------------------------~~~~~~----~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~~~~  323 (351)
                      ....                         .....+    .....++...+ +.+.+||.+||+.||++||++.|+|+|+-
T Consensus       227 ~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~l~~ll~~~L~~dP~~R~s~~ell~h~~  305 (319)
T 4euu_A          227 EGPRRNKEVMYKIITGKPSGAISGVQKAENGPIDWSGDMPVSCSLSRGLQ-VLLTPVLANILEADQEKCWGFDQFFAETS  305 (319)
T ss_dssp             TCGGGCHHHHHHHHHHCCTTCCEEEECSTTCCEEEESSCCTTCSSCHHHH-HHHHHHHHHHSCCCTTTSCCHHHHHHHHH
T ss_pred             CccchhHHHHHHHhcCCCcccchhhhcccCCccccCccCCcccccchhHH-HHhHHHHHHhccCChhhhccHHHhhhccH
Confidence            2110                         011111    11123334445 78999999999999999999999999987


Q ss_pred             HHH
Q 018699          324 QDY  326 (351)
Q Consensus       324 ~~~  326 (351)
                      ++.
T Consensus       306 d~~  308 (319)
T 4euu_A          306 DIL  308 (319)
T ss_dssp             HHT
T ss_pred             HHh
Confidence            553

>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7

Probab=100.00  E-value=9e-45  Score=335.42  Aligned_cols=255  Identities=18%  Similarity=0.210  Sum_probs=203.9

Q ss_pred             CeeEEEEEEeeccCceEEEEEEecCCCCceEEEEecCCCCChHHHHHHHHHhhhccccccccccceeeecccCeeEEEEE
Q 018699           47 GKKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFPWEFYMYRQLDQRISGRERSSFGFAHRIHLYSDYSILVCD  126 (351)
Q Consensus        47 ~~~Y~i~~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e  126 (351)
                      .++|++.+.||+|+||+||+|. +..+|+.||+|++......+...+......+....|++++.+..++...+..++|||
T Consensus        50 ~~~y~i~~~LG~G~~g~Vy~~~-~~~~~~~~a~K~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~lv~E  128 (387)
T 1kob_A           50 YDYYDILEELGSGAFGVVHRCV-EKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDAFEDKYEMVLILE  128 (387)
T ss_dssp             GGTEEEEEEEEEETTEEEEEEE-ETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCSTTBCCEEEEEECSSEEEEEEE
T ss_pred             ccceEEEEEEecCCCEEEEEEE-ECCCCCEEEEEEecccchhhHHHHHHHHHHHHhCCCcCCCeEEEEEEeCCEEEEEEE
Confidence            3689999999999999999999 567889999999876654333333333444556678899999998888899999999


Q ss_pred             ecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeeccCCCCCcccCCe
Q 018699          127 YLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSGPWQDQGL  206 (351)
Q Consensus       127 ~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~~~~~~~~~~~  206 (351)
                      |+++++|.+++...   +..+++..++.++.||+.||.|||++||+||||||+||+++.+               ..+.+
T Consensus       129 ~~~gg~L~~~l~~~---~~~l~~~~~~~i~~qi~~aL~~LH~~givHrDlkp~NIll~~~---------------~~~~v  190 (387)
T 1kob_A          129 FLSGGELFDRIAAE---DYKMSEAEVINYMRQACEGLKHMHEHSIVHLDIKPENIMCETK---------------KASSV  190 (387)
T ss_dssp             CCCCCBHHHHTTCT---TCCBCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESST---------------TCCCE
T ss_pred             cCCCCcHHHHHHhh---cCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccchHHeEEecC---------------CCCce
Confidence            99999999988753   4579999999999999999999999999999999999999732               23569


Q ss_pred             EEeecCCccccccCCCCccccccccCCCcccceeccCCCCCccchHhHHHHHHHHHHhCccccccccCCCCCce----ee
Q 018699          207 CLVDWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQEKKPWKFQVDTYGLCAIVHMMLHNSYMEIEKKASPDGGL----VY  282 (351)
Q Consensus       207 ~l~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~p~~~~~~~~~~~~----~~  282 (351)
                      +|+|||++....   .........||+.|+|||++.+..++.++|||||||++|+|++|..||...........    ..
T Consensus       191 kL~DFG~a~~~~---~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~~~~~~~i~~~~~  267 (387)
T 1kob_A          191 KIIDFGLATKLN---PDEIVKVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGEDDLETLQNVKRCDW  267 (387)
T ss_dssp             EECCCTTCEECC---TTSCEEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHHCCC
T ss_pred             EEEecccceecC---CCcceeeeccCCCccCchhccCCCCCCcccEeeHhHHHHHHHhCCCCCCCCCHHHHHHHHHhCCC
Confidence            999999987543   22233455799999999999999999999999999999999999999975432100000    00


Q ss_pred             ecCcchhhhhHHHHHHHHHHHHhcCCCCCChHHHHHHHHHHH
Q 018699          283 LPKLSFKRYWKVELWKSLFTNLLNMSSGNDKEVLQNLQKSFQ  324 (351)
Q Consensus       283 ~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~~~~~  324 (351)
                      .........++ +.+.+||.+||..||++||++.|+|+|+|.
T Consensus       268 ~~~~~~~~~~s-~~~~~li~~~L~~dP~~Rpt~~ell~hp~~  308 (387)
T 1kob_A          268 EFDEDAFSSVS-PEAKDFIKNLLQKEPRKRLTVHDALEHPWL  308 (387)
T ss_dssp             CCCSSTTTTSC-HHHHHHHHTTSCSSGGGSCCHHHHHTSTTT
T ss_pred             CCCccccccCC-HHHHHHHHHHcCCChhHCcCHHHHhhCccc
Confidence            11111122234 789999999999999999999999999874

>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7}

Probab=100.00  E-value=2.4e-44  Score=330.16  Aligned_cols=269  Identities=17%  Similarity=0.218  Sum_probs=196.2

Q ss_pred             EcCeeEEEEEEeeccCceEEEEEEecCCCCceEEEEecCCCCChHH--HHHHHHHhhhc--cccccccccceeeecccCe
Q 018699           45 IGGKKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFPWEF--YMYRQLDQRIS--GRERSSFGFAHRIHLYSDY  120 (351)
Q Consensus        45 i~~~~Y~i~~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~~~e~--~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~  120 (351)
                      +..++|++.++||+|+||+||+|+ +..+++.||||++........  .....+...+.  ...|++++.....+...+.
T Consensus        32 ~~~~~y~~~~~lG~G~~g~V~~~~-~~~~~~~vavK~~~~~~~~~~~~~~e~~~l~~l~~~~~~h~~iv~~~~~~~~~~~  110 (360)
T 3llt_A           32 LLNNAFLVIRKMGDGTFGRVLLCQ-HIDNKKYYAVKVVRNIKKYTRSAKIEADILKKIQNDDINNNNIVKYHGKFMYYDH  110 (360)
T ss_dssp             EETTTEEEEEEEEECSSEEEEEEE-ETTTCCEEEEEEECSCHHHHHHHHHHHHHHHHTCCCSTTGGGBCCEEEEEEETTE
T ss_pred             EecCEEEEEEEEcccCCeEEEEEE-ECCCCeEEEEEEeccchhhhhhhHHHHHHHHHhcccCCCCCCeecccceeeECCe
Confidence            446899999999999999999999 567889999999875322111  11112222222  2247888888888888899


Q ss_pred             eEEEEEecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeeccCCC--
Q 018699          121 SILVCDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRS--  198 (351)
Q Consensus       121 ~~lv~e~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~~~--  198 (351)
                      .++||||+ +++|.+++....  ...+++..++.++.||+.||.|||++||+||||||+||+++.+............  
T Consensus       111 ~~lv~e~~-~~~L~~~~~~~~--~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~~~~~~~~~~~~  187 (360)
T 3llt_A          111 MCLIFEPL-GPSLYEIITRNN--YNGFHIEDIKLYCIEILKALNYLRKMSLTHTDLKPENILLDDPYFEKSLITVRRVTD  187 (360)
T ss_dssp             EEEEECCC-CCBHHHHHHHTT--TCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEESCTTCCEEEEEEECTTT
T ss_pred             eEEEEcCC-CCCHHHHHHhcC--CCCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCcccEEEccccccccccchhcccc
Confidence            99999999 999999998742  2358999999999999999999999999999999999999842211100000000  


Q ss_pred             -C-----CcccCCeEEeecCCccccccCCCCccccccccCCCcccceeccCCCCCccchHhHHHHHHHHHHhCccccccc
Q 018699          199 -G-----PWQDQGLCLVDWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQEKKPWKFQVDTYGLCAIVHMMLHNSYMEIEK  272 (351)
Q Consensus       199 -~-----~~~~~~~~l~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~p~~~~  272 (351)
                       .     ....+.++|+|||++....     .......||+.|+|||++.+..++.++|||||||++|+|++|..||...
T Consensus       188 ~~~~~~~~~~~~~~kl~DFG~a~~~~-----~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~  262 (360)
T 3llt_A          188 GKKIQIYRTKSTGIKLIDFGCATFKS-----DYHGSIINTRQYRAPEVILNLGWDVSSDMWSFGCVLAELYTGSLLFRTH  262 (360)
T ss_dssp             CCEEEEEEESCCCEEECCCTTCEETT-----SCCCSCCSCGGGCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSCCCS
T ss_pred             cccccccccCCCCEEEEeccCceecC-----CCCcCccCcccccCcHHHcCCCCCCccchHHHHHHHHHHHHCCCCCCCC
Confidence             0     0136789999999986532     1223457899999999999999999999999999999999999999643


Q ss_pred             cCCCCC--------------------------------ceeeecC--------------cchhhhhHHHHHHHHHHHHhc
Q 018699          273 KASPDG--------------------------------GLVYLPK--------------LSFKRYWKVELWKSLFTNLLN  306 (351)
Q Consensus       273 ~~~~~~--------------------------------~~~~~~~--------------~~~~~~~~~~~~~~li~~~L~  306 (351)
                      ......                                ...+...              ...+...+ +.+.+||.+||+
T Consensus       263 ~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~-~~l~~li~~~L~  341 (360)
T 3llt_A          263 EHMEHLAMMESIIQPIPKNMLYEATKTNGSKYVNKDELKLAWPENASSINSIKHVKKCLPLYKIIKH-ELFCDFLYSILQ  341 (360)
T ss_dssp             SHHHHHHHHHHHTCCCCHHHHHHHTTSGGGGGEETTTTEECTTTTCSCHHHHHHHHTCCCHHHHCCC-HHHHHHHHHHCC
T ss_pred             cHHHHHHHHHHhcCCCCHHHHhhhhhccCccccCcccceecCcccccchhhhhhhhhcccccccchH-HHHHHHHHHHhc
Confidence            211000                                0000000              00000011 567899999999


Q ss_pred             CCCCCChHHHHHHHHHH
Q 018699          307 MSSGNDKEVLQNLQKSF  323 (351)
Q Consensus       307 ~dP~~R~s~~e~l~~~~  323 (351)
                      +||++|||+.|+|+|||
T Consensus       342 ~dP~~Rpta~elL~hp~  358 (360)
T 3llt_A          342 IDPTLRPSPAELLKHKF  358 (360)
T ss_dssp             SSGGGSCCHHHHTTSGG
T ss_pred             CChhhCCCHHHHhcCcc
Confidence            99999999999999986

>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C

Probab=100.00  E-value=4.2e-44  Score=332.85  Aligned_cols=253  Identities=18%  Similarity=0.207  Sum_probs=189.2

Q ss_pred             eeEEEE-EEeeccCceEEEEEEecCCCCceEEEEecCCCCChHHHHHHHHHhhhccccccccccceeeecc----cCeeE
Q 018699           48 KKYQIK-GCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFPWEFYMYRQLDQRISGRERSSFGFAHRIHLY----SDYSI  122 (351)
Q Consensus        48 ~~Y~i~-~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~  122 (351)
                      ++|.+. +.||+|+||+||+|. +..+|+.||||++....    ...+++........|++++.+..++..    .+.+|
T Consensus        61 ~~y~~~~~~LG~G~~g~V~~~~-~~~~~~~vAiK~~~~~~----~~~~E~~~~~~~~~hp~iv~l~~~~~~~~~~~~~~~  135 (400)
T 1nxk_A           61 DDYKVTSQVLGLGINGKVLQIF-NKRTQEKFALKMLQDCP----KARREVELHWRASQCPHIVRIVDVYENLYAGRKCLL  135 (400)
T ss_dssp             GTEEEEEEEEEEETTEEEEEEE-ETTTCCEEEEEEEECSH----HHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEE
T ss_pred             ccceeccceeeeccCeEEEEEE-ECCCCCEEEEEEeCcch----hHHHHHHHHHHhcCCCCcceEeEEEeecccCCcEEE
Confidence            567776 799999999999999 57789999999986431    222222222233467788887776643    56789


Q ss_pred             EEEEecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeeccCCCCCcc
Q 018699          123 LVCDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSGPWQ  202 (351)
Q Consensus       123 lv~e~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~~~~~~~  202 (351)
                      +||||++||+|.+++....  +..+++..++.++.||+.||.|||++||+||||||+||+++..+              .
T Consensus       136 lv~E~~~gg~L~~~l~~~~--~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~Nill~~~~--------------~  199 (400)
T 1nxk_A          136 IVMECLDGGELFSRIQDRG--DQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKR--------------P  199 (400)
T ss_dssp             EEEECCCSEEHHHHHHCC-----CCBHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSSS--------------T
T ss_pred             EEEEeCCCCcHHHHHHHhC--CCCCCHHHHHHHHHHHHHHHHHHHHCCccccCcCcceEEEecCC--------------C
Confidence            9999999999999998632  24699999999999999999999999999999999999998322              2


Q ss_pred             cCCeEEeecCCccccccCCCCccccccccCCCcccceeccCCCCCccchHhHHHHHHHHHHhCccccccccCCCCCc---
Q 018699          203 DQGLCLVDWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQEKKPWKFQVDTYGLCAIVHMMLHNSYMEIEKKASPDGG---  279 (351)
Q Consensus       203 ~~~~~l~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~p~~~~~~~~~~~---  279 (351)
                      ++.+||+|||++....   ........+||+.|+|||++.+..++.++|||||||++|+|++|..||..........   
T Consensus       200 ~~~~kl~DFG~a~~~~---~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~  276 (400)
T 1nxk_A          200 NAILKLTDFGFAKETT---SHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMK  276 (400)
T ss_dssp             TCCEEECCCTTCEECC--------------CTTCCGGGSCCCCSSSHHHHHHHHHHHHHHHHSSCSCCCCTTCSSCCSHH
T ss_pred             CccEEEEecccccccC---CCCccccCCCCCCccCHhhcCCCCCCCcccHHHHHHHHHHHHhCCCCCCCCccccccHHHH
Confidence            6789999999987533   2223455678999999999999999999999999999999999999997654331100   


Q ss_pred             -eeeecCcchh----hhhHHHHHHHHHHHHhcCCCCCChHHHHHHHHHHHH
Q 018699          280 -LVYLPKLSFK----RYWKVELWKSLFTNLLNMSSGNDKEVLQNLQKSFQD  325 (351)
Q Consensus       280 -~~~~~~~~~~----~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~~~~~~  325 (351)
                       .........+    ..++ +.+.+||.+||..||++|||+.|++.|+|..
T Consensus       277 ~~i~~~~~~~~~~~~~~~s-~~~~~li~~~L~~dP~~Rpt~~eil~hp~~~  326 (400)
T 1nxk_A          277 TRIRMGQYEFPNPEWSEVS-EEVKMLIRNLLKTEPTQRMTITEFMNHPWIM  326 (400)
T ss_dssp             HHHHHTCCCCCTTTTTTSC-HHHHHHHHTTSCSSGGGSCCHHHHHHSHHHH
T ss_pred             HHHHcCcccCCCcccccCC-HHHHHHHHHHCCCChhHCcCHHHHhcCcccc
Confidence             0000111111    2234 7899999999999999999999999999854

>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A

Probab=100.00  E-value=2.1e-44  Score=354.90  Aligned_cols=256  Identities=16%  Similarity=0.182  Sum_probs=204.7

Q ss_pred             EEcCeeEEEEEEeeccCceEEEEEEecCCCCceEEEEecCCCCC---hHHH-HHHHHHhhhccccccccccceeeecccC
Q 018699           44 EIGGKKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFP---WEFY-MYRQLDQRISGRERSSFGFAHRIHLYSD  119 (351)
Q Consensus        44 ~i~~~~Y~i~~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~~---~e~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~  119 (351)
                      .+..++|++.+.||+|+||+||+|+ +..+++.||||++.+...   .... ...+.........+++++.+...+...+
T Consensus       337 ~~~~~~f~~~~~LG~G~fG~V~~~~-~~~~~~~vAvK~l~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~l~~~~~~~~  415 (674)
T 3pfq_A          337 RMKLTDFNFLMVLGKGSFGKVMLSE-RKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMD  415 (674)
T ss_dssp             ---CTTEEEEEESSBTTTBCEEEEE-ESSSCCEEEEEEEEHHHHHHTTTTHHHHHHHHHHTCTTCCTTBCCEEEECBCSS
T ss_pred             cccccceEEEEEEccCCCEEEEEEE-ECCCCcEEEEEEEeccccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEEEeCC
Confidence            3445789999999999999999999 567889999999864311   1111 1112111112236778888888888889


Q ss_pred             eeEEEEEecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeeccCCCC
Q 018699          120 YSILVCDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSG  199 (351)
Q Consensus       120 ~~~lv~e~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~~~~  199 (351)
                      .+|+||||++||+|.+++...    ..+++..++.++.||+.||.|||++||+||||||+||+++               
T Consensus       416 ~~~lV~E~~~gg~L~~~l~~~----~~~~~~~~~~~~~qi~~aL~~LH~~gIiHrDLKp~NILl~---------------  476 (674)
T 3pfq_A          416 RLYFVMEYVNGGDLMYHIQQV----GRFKEPHAVFYAAEIAIGLFFLQSKGIIYRDLKLDNVMLD---------------  476 (674)
T ss_dssp             EEEEEEECCCSCBHHHHHHHH----SSCCHHHHHHHHHHHHHHHHHHHHTSEECCCCCSTTEEEC---------------
T ss_pred             EEEEEEeCcCCCcHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHhCCeEeccCChhhEEEc---------------
Confidence            999999999999999999874    6799999999999999999999999999999999999999               


Q ss_pred             CcccCCeEEeecCCccccccCCCCccccccccCCCcccceeccCCCCCccchHhHHHHHHHHHHhCccccccccCCCCCc
Q 018699          200 PWQDQGLCLVDWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQEKKPWKFQVDTYGLCAIVHMMLHNSYMEIEKKASPDGG  279 (351)
Q Consensus       200 ~~~~~~~~l~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~p~~~~~~~~~~~  279 (351)
                        .++.+||+|||++....  .........+||+.|+|||++.+..++.++|||||||++|+|++|..||...+......
T Consensus       477 --~~g~ikL~DFGla~~~~--~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~DvwSlGvilyelltG~~Pf~~~~~~~~~~  552 (674)
T 3pfq_A          477 --SEGHIKIADFGMCKENI--WDGVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQ  552 (674)
T ss_dssp             --SSSCEEECCCTTCEECC--CTTCCBCCCCSCSSSCCHHHHTCCCBSTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHH
T ss_pred             --CCCcEEEeecceeeccc--cCCcccccccCCCcccCHhhhcCCCCCccceEechHHHHHHHHcCCCCCCCCCHHHHHH
Confidence              77889999999987422  22334556789999999999999999999999999999999999999998654432222


Q ss_pred             eeeecCcchhhhhHHHHHHHHHHHHhcCCCCCChHH-----HHHHHHHHH
Q 018699          280 LVYLPKLSFKRYWKVELWKSLFTNLLNMSSGNDKEV-----LQNLQKSFQ  324 (351)
Q Consensus       280 ~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~-----~e~l~~~~~  324 (351)
                      .+......+|..++ +.+.+||.+||++||++|+++     .|+++|+|.
T Consensus       553 ~i~~~~~~~p~~~s-~~~~~li~~lL~~dP~~R~~~~~~~~~ei~~h~ff  601 (674)
T 3pfq_A          553 SIMEHNVAYPKSMS-KEAVAICKGLMTKHPGKRLGCGPEGERDIKEHAFF  601 (674)
T ss_dssp             HHHSSCCCCCTTSC-HHHHHHHHHHSCSSSTTCTTCSTTHHHHHHSSGGG
T ss_pred             HHHhCCCCCCccCC-HHHHHHHHHHccCCHHHCCCCCCCcHHHHhcCccc
Confidence            22334445555566 889999999999999999987     899999874

>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus}

Probab=100.00  E-value=1.4e-44  Score=341.98  Aligned_cols=252  Identities=16%  Similarity=0.157  Sum_probs=202.1

Q ss_pred             eeEEEEEEeeccCceEEEEEEecCCCCceEEEEecCCCCChH---HHHHHHHHhhhccccccccccceeeecccCeeEEE
Q 018699           48 KKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFPWE---FYMYRQLDQRISGRERSSFGFAHRIHLYSDYSILV  124 (351)
Q Consensus        48 ~~Y~i~~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~~~e---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv  124 (351)
                      ++|++.+.||+|+||+||+|+ +..+|+.||||++.+.....   ...+...........|++++.+..+....+..|+|
T Consensus        16 ~~Y~l~~~LG~G~fg~V~~a~-~~~~g~~vAvK~i~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~lv   94 (476)
T 2y94_A           16 GHYILGDTLGVGTFGKVKVGK-HELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKLYQVISTPSDIFMV   94 (476)
T ss_dssp             TTEEEEEEEECCSSSCEEEEE-ETTTCCEEEEEEEEHHHHHHTTTHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred             cCEEEEEEEeeCCCeEEEEEE-ECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEE
Confidence            589999999999999999999 56789999999986432111   11222222334456788999999988888999999


Q ss_pred             EEecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeeccCCCCCcccC
Q 018699          125 CDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSGPWQDQ  204 (351)
Q Consensus       125 ~e~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~~~~~~~~~  204 (351)
                      |||+++++|.+++..    +..+++..++.++.||+.||.|||++||+||||||+||+++                 .++
T Consensus        95 ~E~~~gg~L~~~l~~----~~~l~~~~~~~i~~qi~~aL~~LH~~givHrDLkp~NIll~-----------------~~~  153 (476)
T 2y94_A           95 MEYVSGGELFDYICK----NGRLDEKESRRLFQQILSGVDYCHRHMVVHRDLKPENVLLD-----------------AHM  153 (476)
T ss_dssp             EECCSSEEHHHHTTS----SSSCCHHHHHHHHHHHHHHHHHHHTTTEECSCCSGGGEEEC-----------------TTC
T ss_pred             EeCCCCCcHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHCCCCcccccHHHEEEe-----------------cCC
Confidence            999999999999976    56899999999999999999999999999999999999999                 778


Q ss_pred             CeEEeecCCccccccCCCCccccccccCCCcccceeccCCCC-CccchHhHHHHHHHHHHhCccccccccCCCCCceeee
Q 018699          205 GLCLVDWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQEKKPW-KFQVDTYGLCAIVHMMLHNSYMEIEKKASPDGGLVYL  283 (351)
Q Consensus       205 ~~~l~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~-~~~~DiwslG~il~~l~~g~~p~~~~~~~~~~~~~~~  283 (351)
                      .++|+|||++....   ........+||+.|+|||++.+..+ +.++|||||||++|+|++|..||..............
T Consensus       154 ~vkL~DFG~a~~~~---~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~i~~  230 (476)
T 2y94_A          154 NAKIADFGLSNMMS---DGEFLRTSCGSPNYAAPEVISGRLYAGPEVDIWSSGVILYALLCGTLPFDDDHVPTLFKKICD  230 (476)
T ss_dssp             CEEECCCSSCEECC---TTCCBCCCCSCSTTCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSSCCSSSHHHHHHHHT
T ss_pred             CeEEEeccchhhcc---ccccccccCCCcCeEChhhccCCCCCCCcceehhhHHHHHHHhhCCCCCCCCCHHHHHHHHhc
Confidence            89999999986533   2233456689999999999988765 6899999999999999999999975433211111111


Q ss_pred             cCcchhhhhHHHHHHHHHHHHhcCCCCCChHHHHHHHHHHHH
Q 018699          284 PKLSFKRYWKVELWKSLFTNLLNMSSGNDKEVLQNLQKSFQD  325 (351)
Q Consensus       284 ~~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~~~~~~  325 (351)
                      .....|...+ +.+.+||.+||..||.+|||+.|++.|||..
T Consensus       231 ~~~~~p~~~s-~~~~~Li~~~L~~dP~~Rpt~~eil~hp~~~  271 (476)
T 2y94_A          231 GIFYTPQYLN-PSVISLLKHMLQVDPMKRATIKDIREHEWFK  271 (476)
T ss_dssp             TCCCCCTTCC-HHHHHHHHHHTCSSTTTSCCHHHHHTCHHHH
T ss_pred             CCcCCCccCC-HHHHHHHHHHcCCCchhCcCHHHHHhCHHhh
Confidence            1222333344 7899999999999999999999999998753

>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens}

Probab=100.00  E-value=4.9e-43  Score=314.95  Aligned_cols=255  Identities=11%  Similarity=0.091  Sum_probs=201.1

Q ss_pred             EEcCeeEEEEEEeeccCceEEEEEEecCCCCceEEEEecCCCCChHHHHHHHHHhhhccccccccccceeeecccCeeEE
Q 018699           44 EIGGKKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFPWEFYMYRQLDQRISGRERSSFGFAHRIHLYSDYSIL  123 (351)
Q Consensus        44 ~i~~~~Y~i~~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  123 (351)
                      .+..++|++.+.||+|+||+||+|. +..+++.||+|++..........+...........|++++.+..++..++..++
T Consensus         6 ~~~~~~~~~~~~lG~G~~g~V~~~~-~~~~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~l   84 (310)
T 3s95_A            6 IFRPSDLIHGEVLGKGCFGQAIKVT-HRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFIGVLYKDKRLNF   84 (310)
T ss_dssp             EECGGGEEEEEEEECCSSEEEEEEE-ETTTCCEEEEEEESCCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEE
T ss_pred             eeChhHeeccceecCCCCEEEEEEE-ECCCCcEEEEEEeccCCHHHHHHHHHHHHHHHhCCCcCcccEEEEEecCCeeEE
Confidence            4567899999999999999999999 567889999998866543333333333444556678999999998888899999


Q ss_pred             EEEecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeeccCCCCCccc
Q 018699          124 VCDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSGPWQD  203 (351)
Q Consensus       124 v~e~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~~~~~~~~  203 (351)
                      ||||+++++|.+++...   +..+++..++.++.|++.||+|||++||+|+||||+||+++                 .+
T Consensus        85 v~e~~~~~~L~~~l~~~---~~~~~~~~~~~i~~qi~~al~~lH~~~ivH~dlkp~Nil~~-----------------~~  144 (310)
T 3s95_A           85 ITEYIKGGTLRGIIKSM---DSQYPWSQRVSFAKDIASGMAYLHSMNIIHRDLNSHNCLVR-----------------EN  144 (310)
T ss_dssp             EEECCTTCBHHHHHHHC---CTTSCHHHHHHHHHHHHHHHHHHHHTTEECSCCSTTSEEEC-----------------TT
T ss_pred             EEEecCCCcHHHHHHhc---cCCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCCcCeEEEC-----------------CC
Confidence            99999999999999874   46789999999999999999999999999999999999999                 77


Q ss_pred             CCeEEeecCCccccccCCCC------------ccccccccCCCcccceeccCCCCCccchHhHHHHHHHHHHhCcccccc
Q 018699          204 QGLCLVDWGRGIDLHLFPDN------------MEFEGDCRTSGFRCIEMQEKKPWKFQVDTYGLCAIVHMMLHNSYMEIE  271 (351)
Q Consensus       204 ~~~~l~Dfg~a~~~~~~~~~------------~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~p~~~  271 (351)
                      +.++|+|||++.........            .......||+.|+|||++.+..++.++||||||+++|+|++|..|+..
T Consensus       145 ~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~  224 (310)
T 3s95_A          145 KNVVVADFGLARLMVDEKTQPEGLRSLKKPDRKKRYTVVGNPYWMAPEMINGRSYDEKVDVFSFGIVLCEIIGRVNADPD  224 (310)
T ss_dssp             SCEEECCCTTCEECC--------------------CCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHTCCSSTT
T ss_pred             CCEEEeecccceecccccccccccccccccccccccccCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHhcCCCCCcc
Confidence            88999999998654321111            111245789999999999999999999999999999999999998875


Q ss_pred             ccCCCCCceee---ecCcchhhhhHHHHHHHHHHHHhcCCCCCChHHHHHHH
Q 018699          272 KKASPDGGLVY---LPKLSFKRYWKVELWKSLFTNLLNMSSGNDKEVLQNLQ  320 (351)
Q Consensus       272 ~~~~~~~~~~~---~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~  320 (351)
                      ...........   ......+..++ +.+.++|.+||+.||++||++.+++.
T Consensus       225 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~l~~li~~~l~~dP~~Rps~~~l~~  275 (310)
T 3s95_A          225 YLPRTMDFGLNVRGFLDRYCPPNCP-PSFFPITVRCCDLDPEKRPSFVKLEH  275 (310)
T ss_dssp             TSCBCTTSSBCHHHHHHHTCCTTCC-TTHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             hhhhHHHHhhhhhccccccCCCCCC-HHHHHHHHHHccCChhhCcCHHHHHH
Confidence            43321111000   01111122233 67899999999999999999999876

>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A

Probab=100.00  E-value=1.2e-43  Score=327.71  Aligned_cols=251  Identities=14%  Similarity=0.175  Sum_probs=187.2

Q ss_pred             CeeEEEEEEeeccCceEEEEEEecCCCCceEEEEecCCCCC---hHH-HHHHHHH--hhhccccccccccce-------e
Q 018699           47 GKKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFP---WEF-YMYRQLD--QRISGRERSSFGFAH-------R  113 (351)
Q Consensus        47 ~~~Y~i~~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~~---~e~-~~~~~~~--~~~~~~~~~~~~~~~-------~  113 (351)
                      .++|++.+.||+|+||+||+|+ +..+|+.||||++.....   ... ...+++.  ..+....|++++...       +
T Consensus        72 ~~~y~~~~~lG~G~~g~V~~a~-~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~hpniv~~~~~~~~~~~  150 (377)
T 3byv_A           72 PRTLVRGTVLGQEDPYAYLEAT-DQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFD  150 (377)
T ss_dssp             CEEEEEEEEEEEETTEEEEEEE-C-CCCCEEEEEEEEECC-CCTTHHHHHHHHHHGGGGSTTCCSHHHHHHHHCBCCCSE
T ss_pred             CceEEEcceeecCCCEEEEEEE-ECCCCcEEEEEEEeeccccchHHHHHHHHHHHHHHhccccCCHHHHHHHhhhhhhhh
Confidence            5899999999999999999999 567789999999864322   122 2222221  333444677776554       3


Q ss_pred             eecccC-----------------eeEEEEEecCCCCHHHHHHHHHhh---CCChhHHHHHHHHHHHHHHHHHHHHCCcee
Q 018699          114 IHLYSD-----------------YSILVCDYLSQGTLQDAINSYVVI---GKSMEEVLCIYYTIEMLCILESLHDVGIIH  173 (351)
Q Consensus       114 ~~~~~~-----------------~~~lv~e~~~~~sL~~~l~~~~~~---~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H  173 (351)
                      +....+                 ..|+||||+ +|+|.+++......   +..+++..++.++.||+.||+|||++||+|
T Consensus       151 ~~~~~~~~~~~~~~~~~~~~~i~~~~lv~E~~-~g~L~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH  229 (377)
T 3byv_A          151 LVKDPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHYGLVH  229 (377)
T ss_dssp             EEECTTSCSEEEC------CEEESEEEEEECC-SEEHHHHHHHHHHTTTTTHHHHHHHHHHHHHHHHHHHHHHHHTTEEC
T ss_pred             hhhccCCccccccccCCCceEEEEEEEEEecc-CCCHHHHHHhccccccccccccHHHHHHHHHHHHHHHHHHHhCCeec
Confidence            332221                 378999999 78999999875311   123556888899999999999999999999


Q ss_pred             cCCCCCcEEEeecCCcceeeccCCCCCcccCCeEEeecCCccccccCCCCccccccccCCCcccceeccCC---------
Q 018699          174 GDFKPDNLLIRYARDELTVLDHDRSGPWQDQGLCLVDWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQEKK---------  244 (351)
Q Consensus       174 ~dl~p~Nill~~~~~~~~~~~~~~~~~~~~~~~~l~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~---------  244 (351)
                      |||||+||+++                 .++.+||+|||++...     ........| +.|+|||++.+.         
T Consensus       230 rDikp~NIll~-----------------~~~~~kL~DFG~a~~~-----~~~~~~~~g-~~y~aPE~~~~~~~~~~~~~~  286 (377)
T 3byv_A          230 TYLRPVDIVLD-----------------QRGGVFLTGFEHLVRD-----GARVVSSVS-RGFEPPELEARRATISYHRDR  286 (377)
T ss_dssp             SCCCGGGEEEC-----------------TTCCEEECCGGGCEET-----TCEEECCCC-TTCCCHHHHHHHTSTHHHHCC
T ss_pred             CCCCHHHEEEc-----------------CCCCEEEEechhheec-----CCcccCCCC-cCccChhhhcccccccccccc
Confidence            99999999999                 7788999999998642     223445567 999999999877         


Q ss_pred             --CCCccchHhHHHHHHHHHHhCccccccccCCCCCceeeecCcchhhhhHHHHHHHHHHHHhcCCCCCChHHHHHHHHH
Q 018699          245 --PWKFQVDTYGLCAIVHMMLHNSYMEIEKKASPDGGLVYLPKLSFKRYWKVELWKSLFTNLLNMSSGNDKEVLQNLQKS  322 (351)
Q Consensus       245 --~~~~~~DiwslG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~~~  322 (351)
                        .++.++|||||||++|+|++|..||..................    ++ +.+.+||.+||+.||++||++.|+++||
T Consensus       287 ~~~~~~~~DvwSlG~il~elltg~~Pf~~~~~~~~~~~~~~~~~~----~~-~~~~~li~~~L~~dp~~Rpt~~e~l~hp  361 (377)
T 3byv_A          287 RTLMTFSFDAWALGLVIYWIWCADLPITKDAALGGSEWIFRSCKN----IP-QPVRALLEGFLRYPKEDRLLPLQAMETP  361 (377)
T ss_dssp             EEECCHHHHHHHHHHHHHHHHHSSCCC------CCSGGGGSSCCC----CC-HHHHHHHHHHTCSSGGGCCCHHHHHTSH
T ss_pred             cccCChhhhHHHHHHHHHHHHHCCCCCcccccccchhhhhhhccC----CC-HHHHHHHHHHcCCCchhCCCHHHHhhCh
Confidence              8899999999999999999999999766544332222222222    23 7899999999999999999999999998


Q ss_pred             HHHHH
Q 018699          323 FQDYL  327 (351)
Q Consensus       323 ~~~~~  327 (351)
                      |..-+
T Consensus       362 ~f~~~  366 (377)
T 3byv_A          362 EYEQL  366 (377)
T ss_dssp             HHHHH
T ss_pred             HHHHH
Confidence            75543

>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A*

Probab=100.00  E-value=7.9e-44  Score=321.77  Aligned_cols=251  Identities=16%  Similarity=0.123  Sum_probs=201.0

Q ss_pred             eEEEEEEeeccCceEEEEEEecCCCCceEEEEecCCCCChHHHHHHHHHhhhccccccccccceeeecccCeeEEEEEec
Q 018699           49 KYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFPWEFYMYRQLDQRISGRERSSFGFAHRIHLYSDYSILVCDYL  128 (351)
Q Consensus        49 ~Y~i~~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~  128 (351)
                      .|...+.||+|+||+||+|+ +..+|+.||||++........+.+...........|++++....++...+..++||||+
T Consensus        46 ~~~~~~~lg~G~~g~V~~a~-~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~  124 (321)
T 2c30_A           46 LLDSYVKIGEGSTGIVCLAR-EKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHFNVVEMYKSYLVGEELWVLMEFL  124 (321)
T ss_dssp             HEEEEEEEEEETTEEEEEEE-ETTTCCEEEEEEEETTTCCSHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEECCC
T ss_pred             hhhccEEeccCCCeEEEEEE-ECCCCcEEEEEEEeccchhHHHHHHHHHHHHHhCCCCCcceEEEEEEECCEEEEEEecC
Confidence            58888999999999999999 56778999999987654443333333334455667889988888888889999999999


Q ss_pred             CCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeeccCCCCCcccCCeEE
Q 018699          129 SQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSGPWQDQGLCL  208 (351)
Q Consensus       129 ~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~~~~~~~~~~~~l  208 (351)
                      ++++|.+++..     ..+++..+..++.|++.||.|||++||+|+||||+||+++                 .++.++|
T Consensus       125 ~~~~L~~~l~~-----~~l~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~-----------------~~~~~kl  182 (321)
T 2c30_A          125 QGGALTDIVSQ-----VRLNEEQIATVCEAVLQALAYLHAQGVIHRDIKSDSILLT-----------------LDGRVKL  182 (321)
T ss_dssp             CSCBHHHHHTT-----CCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEC-----------------TTCCEEE
T ss_pred             CCCCHHHHHHh-----cCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEC-----------------CCCcEEE
Confidence            99999998864     5789999999999999999999999999999999999999                 7788999


Q ss_pred             eecCCccccccCCCCccccccccCCCcccceeccCCCCCccchHhHHHHHHHHHHhCccccccccCCCCCcee---eecC
Q 018699          209 VDWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQEKKPWKFQVDTYGLCAIVHMMLHNSYMEIEKKASPDGGLV---YLPK  285 (351)
Q Consensus       209 ~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~p~~~~~~~~~~~~~---~~~~  285 (351)
                      +|||++......  ........||+.|+|||++.+..++.++||||||+++|+|++|..||............   ..+.
T Consensus       183 ~Dfg~~~~~~~~--~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~  260 (321)
T 2c30_A          183 SDFGFCAQISKD--VPKRKSLVGTPYWMAPEVISRSLYATEVDIWSLGIMVIEMVDGEPPYFSDSPVQAMKRLRDSPPPK  260 (321)
T ss_dssp             CCCTTCEECCSS--SCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSSCCC
T ss_pred             eeeeeeeecccC--ccccccccCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCCCC
Confidence            999998654321  22234567899999999999988999999999999999999999999754321000000   0111


Q ss_pred             cchhhhhHHHHHHHHHHHHhcCCCCCChHHHHHHHHHHHH
Q 018699          286 LSFKRYWKVELWKSLFTNLLNMSSGNDKEVLQNLQKSFQD  325 (351)
Q Consensus       286 ~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~~~~~~  325 (351)
                      ...+...+ +.+.+||.+||..||++||++.+++.|||..
T Consensus       261 ~~~~~~~~-~~l~~li~~~l~~dp~~Rps~~ell~hp~~~  299 (321)
T 2c30_A          261 LKNSHKVS-PVLRDFLERMLVRDPQERATAQELLDHPFLL  299 (321)
T ss_dssp             CTTGGGSC-HHHHHHHHHHSCSSTTTSCCHHHHHTSGGGG
T ss_pred             cCccccCC-HHHHHHHHHHccCChhhCcCHHHHhcChhhc
Confidence            12222334 7899999999999999999999999998753

>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens}

Probab=100.00  E-value=1.6e-44  Score=322.91  Aligned_cols=252  Identities=17%  Similarity=0.174  Sum_probs=189.9

Q ss_pred             CeeEEEEEEeeccCceEEEEEEecCCCCceEEEEecCCCCChH--------------------------HHHHHHHHhhh
Q 018699           47 GKKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFPWE--------------------------FYMYRQLDQRI  100 (351)
Q Consensus        47 ~~~Y~i~~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~~~e--------------------------~~~~~~~~~~~  100 (351)
                      .++|++.+.||+|+||+||+|+ +..+++.||||++.......                          .+.+......+
T Consensus        12 ~~~y~~~~~lG~G~~g~Vy~a~-~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l   90 (298)
T 2zv2_A           12 LNQYTLKDEIGKGSYGVVKLAY-NENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGCIQPRGPIEQVYQEIAIL   90 (298)
T ss_dssp             ETTEEEEEEEEC--CCEEEEEE-ETTTTEEEEEEEEECC-------------------------------CHHHHHHHHH
T ss_pred             ecceEEEeEEeecCCEEEEEEE-ECCCCcEEEEEEeehhhhhhhcccccccccccccccccccccccchHHHHHHHHHHH
Confidence            3689999999999999999999 57789999999986543111                          11112222333


Q ss_pred             ccccccccccceeeecc--cCeeEEEEEecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCC
Q 018699          101 SGRERSSFGFAHRIHLY--SDYSILVCDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKP  178 (351)
Q Consensus       101 ~~~~~~~~~~~~~~~~~--~~~~~lv~e~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p  178 (351)
                      ....|++++.+..+...  .+..|+||||+++++|.+++.     ...+++..++.++.|++.||.|||++||+|+||||
T Consensus        91 ~~l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~-----~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp  165 (298)
T 2zv2_A           91 KKLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPT-----LKPLSEDQARFYFQDLIKGIEYLHYQKIIHRDIKP  165 (298)
T ss_dssp             HTCCCTTBCCEEEEEECSSSSEEEEEEECCTTCBSCCSSC-----SSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCG
T ss_pred             HhCCCCCCCeEEEEEEcCCCCEEEEEEecCCCCcHHHHhh-----cCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCH
Confidence            44568888888887754  578899999999999987643     35799999999999999999999999999999999


Q ss_pred             CcEEEeecCCcceeeccCCCCCcccCCeEEeecCCccccccCCCCccccccccCCCcccceeccCCC---CCccchHhHH
Q 018699          179 DNLLIRYARDELTVLDHDRSGPWQDQGLCLVDWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQEKKP---WKFQVDTYGL  255 (351)
Q Consensus       179 ~Nill~~~~~~~~~~~~~~~~~~~~~~~~l~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~---~~~~~Diwsl  255 (351)
                      +||+++                 .++.++|+|||++.....  .........||+.|+|||++.+..   ++.++|||||
T Consensus       166 ~Nil~~-----------------~~~~~kl~Dfg~~~~~~~--~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~sl  226 (298)
T 2zv2_A          166 SNLLVG-----------------EDGHIKIADFGVSNEFKG--SDALLSNTVGTPAFMAPESLSETRKIFSGKALDVWAM  226 (298)
T ss_dssp             GGEEEC-----------------TTSCEEECCCTTCEECSS--SSCEECCCCSCGGGCCGGGCCTTCCCEESHHHHHHHH
T ss_pred             HHEEEC-----------------CCCCEEEecCCCcccccc--ccccccCCcCCccccChhhhccCCCCCCCchhhhHhH
Confidence            999999                 778899999999865432  122334567899999999997655   3688999999


Q ss_pred             HHHHHHHHhCccccccccCCCCCceeee--cCcchhhhhHHHHHHHHHHHHhcCCCCCChHHHHHHHHHHH
Q 018699          256 CAIVHMMLHNSYMEIEKKASPDGGLVYL--PKLSFKRYWKVELWKSLFTNLLNMSSGNDKEVLQNLQKSFQ  324 (351)
Q Consensus       256 G~il~~l~~g~~p~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~~~~~  324 (351)
                      ||++|+|++|..||..............  ...+.....+ +.+.+||.+||+.||++||++.|+++|||.
T Consensus       227 G~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~-~~l~~li~~~l~~dp~~R~s~~e~l~hp~~  296 (298)
T 2zv2_A          227 GVTLYCFVFGQCPFMDERIMCLHSKIKSQALEFPDQPDIA-EDLKDLITRMLDKNPESRIVVPEIKLHPWV  296 (298)
T ss_dssp             HHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCCSSSCCC-HHHHHHHHHHTCSCTTTSCCHHHHTTCHHH
T ss_pred             HHHHHHHHHCCCCCCCccHHHHHHHHhcccCCCCCccccC-HHHHHHHHHHhhcChhhCCCHHHHhcCccc
Confidence            9999999999999965432100000000  0001111223 789999999999999999999999999975

>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A*

Probab=100.00  E-value=1.8e-43  Score=327.57  Aligned_cols=261  Identities=18%  Similarity=0.187  Sum_probs=193.3

Q ss_pred             cceEEEEcCeeEEEEEEeeccCceEEEEEEecCCCCceEEEEecCCCCChHH--HHHHHHHhhhccc--cccccccceee
Q 018699           39 RNKTIEIGGKKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFPWEF--YMYRQLDQRISGR--ERSSFGFAHRI  114 (351)
Q Consensus        39 ~~~~~~i~~~~Y~i~~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~~~e~--~~~~~~~~~~~~~--~~~~~~~~~~~  114 (351)
                      ....+.+.+++|++.+.||+|+||+||+|.+ .. ++.||||++........  ..+......+...  .+++++.+..+
T Consensus        47 ~~~~~~~~~~~y~~~~~LG~G~fg~Vy~~~~-~~-~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~~~~~~iv~~~~~  124 (390)
T 2zmd_A           47 ANECISVKGRIYSILKQIGSGGSSKVFQVLN-EK-KQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDY  124 (390)
T ss_dssp             --CCEEETTEEEEEEEEEECCSSEEEEEEEC-TT-CCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEE
T ss_pred             ccccccccCCceEEEEEEccCCCeEEEEEEc-CC-CCEEEEEEEecccccHHHHHHHHHHHHHHHHcccCCCeEEEEEEE
Confidence            3456788899999999999999999999994 33 89999999875533221  1111111111222  25778888888


Q ss_pred             ecccCeeEEEEEecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeec
Q 018699          115 HLYSDYSILVCDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLD  194 (351)
Q Consensus       115 ~~~~~~~~lv~e~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~  194 (351)
                      ....+.+|+||| +.+++|.+++..    ...+++..++.++.||+.||.|||++||+||||||+||+++          
T Consensus       125 ~~~~~~~~lv~E-~~~~~L~~~l~~----~~~~~~~~~~~i~~qi~~aL~~lH~~~ivHrDlkp~NIll~----------  189 (390)
T 2zmd_A          125 EITDQYIYMVME-CGNIDLNSWLKK----KKSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIV----------  189 (390)
T ss_dssp             EECSSEEEEEEE-CCSEEHHHHHHH----CSSCCHHHHHHHHHHHHHHHHHHHTTTCCCCCCCGGGEEES----------
T ss_pred             EecCCEEEEEEe-cCCCCHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHEEEE----------
Confidence            888889999999 558899999987    46889999999999999999999999999999999999996          


Q ss_pred             cCCCCCcccCCeEEeecCCccccccCCCCccccccccCCCcccceeccC-----------CCCCccchHhHHHHHHHHHH
Q 018699          195 HDRSGPWQDQGLCLVDWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQEK-----------KPWKFQVDTYGLCAIVHMML  263 (351)
Q Consensus       195 ~~~~~~~~~~~~~l~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~-----------~~~~~~~DiwslG~il~~l~  263 (351)
                              ++.+||+|||++...............+||+.|+|||++.+           ..++.++|||||||++|+|+
T Consensus       190 --------~~~~kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwSlGvil~ell  261 (390)
T 2zmd_A          190 --------DGMLKLIDFGIANQMQPDTTSVVKDSQVGAVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMT  261 (390)
T ss_dssp             --------SSCEEECCCSSSCCC---------CCSCCCGGGCCHHHHHCC------------CCHHHHHHHHHHHHHHHH
T ss_pred             --------CCeEEEEecCccccccCCCccccCCCCCcCCCccChHHhhhccccccccccccCCCChhhHHHHHHHHHHHH
Confidence                    25699999999975432222222345679999999999865           36789999999999999999


Q ss_pred             hCccccccccCCCC-Cceee--ecCcchhhhhHHHHHHHHHHHHhcCCCCCChHHHHHHHHHHHH
Q 018699          264 HNSYMEIEKKASPD-GGLVY--LPKLSFKRYWKVELWKSLFTNLLNMSSGNDKEVLQNLQKSFQD  325 (351)
Q Consensus       264 ~g~~p~~~~~~~~~-~~~~~--~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~~~~~~  325 (351)
                      +|..||........ .....  ......+...+ +.+.+||.+||+.||.+||++.|+|+|||..
T Consensus       262 ~G~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~li~~~L~~dP~~Rps~~ell~hp~~~  325 (390)
T 2zmd_A          262 YGKTPFQQIINQISKLHAIIDPNHEIEFPDIPE-KDLQDVLKCCLKRDPKQRISIPELLAHPYVQ  325 (390)
T ss_dssp             HSSCTTTTCCCHHHHHHHHHCTTSCCCCCCCSC-HHHHHHHHHHTCSSTTTSCCHHHHHTSHHHH
T ss_pred             HCCCcchhhhHHHHHHHHHhCccccCCCCccch-HHHHHHHHHHcccChhhCCCHHHHhhCcCcc
Confidence            99999964321100 00000  01112222233 7899999999999999999999999999854

>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens}

Probab=100.00  E-value=1.6e-44  Score=329.95  Aligned_cols=252  Identities=18%  Similarity=0.198  Sum_probs=189.0

Q ss_pred             CeeEEEEEEeeccCceEEEEEEecCCCCceEEEEecCCCCChHHHHHHHHHhhhccccccccccceeeecccCeeEEEEE
Q 018699           47 GKKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFPWEFYMYRQLDQRISGRERSSFGFAHRIHLYSDYSILVCD  126 (351)
Q Consensus        47 ~~~Y~i~~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e  126 (351)
                      .++|++.+.||+|+||+||+|+ +..+++.||||++......  ..+......+....|++++.+..++..++..++|||
T Consensus        52 ~~~y~~~~~lG~G~~g~Vy~~~-~~~~~~~vavK~~~~~~~~--~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e  128 (349)
T 2w4o_A           52 SDFFEVESELGRGATSIVYRCK-QKGTQKPYALKVLKKTVDK--KIVRTEIGVLLRLSHPNIIKLKEIFETPTEISLVLE  128 (349)
T ss_dssp             GGTEEEEEEEEECSSEEEEEEE-ETTTCCEEEEEEEEC------------CHHHHHCCCTTBCCEEEEEECSSEEEEEEC
T ss_pred             cCcEEEeeEEeeCCCEEEEEEE-ECCCCcEEEEEEeccchhH--HHHHHHHHHHHhCCCCCCcceeeeEecCCeEEEEEE
Confidence            4679999999999999999999 5677899999998754321  111112222334467888888888888899999999


Q ss_pred             ecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeeccCCCCCcccCCe
Q 018699          127 YLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSGPWQDQGL  206 (351)
Q Consensus       127 ~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~~~~~~~~~~~  206 (351)
                      |+++++|.+++..    +..+++..++.++.|++.||.|||++||+||||||+||+++..+              .++.+
T Consensus       129 ~~~~~~L~~~l~~----~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~Dikp~NIll~~~~--------------~~~~~  190 (349)
T 2w4o_A          129 LVTGGELFDRIVE----KGYYSERDAADAVKQILEAVAYLHENGIVHRDLKPENLLYATPA--------------PDAPL  190 (349)
T ss_dssp             CCCSCBHHHHHTT----CSSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEESSSS--------------TTCCE
T ss_pred             eCCCCCHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCcccEEEecCC--------------CCCCE
Confidence            9999999999876    46799999999999999999999999999999999999998322              36779


Q ss_pred             EEeecCCccccccCCCCccccccccCCCcccceeccCCCCCccchHhHHHHHHHHHHhCccccccccCCC-------CCc
Q 018699          207 CLVDWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQEKKPWKFQVDTYGLCAIVHMMLHNSYMEIEKKASP-------DGG  279 (351)
Q Consensus       207 ~l~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~p~~~~~~~~-------~~~  279 (351)
                      +|+|||++....   .........||+.|+|||++.+..++.++|||||||++|+|++|..||.......       ...
T Consensus       191 kl~Dfg~a~~~~---~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~i~~~~  267 (349)
T 2w4o_A          191 KIADFGLSKIVE---HQVLMKTVCGTPGYCAPEILRGCAYGPEVDMWSVGIITYILLCGFEPFYDERGDQFMFRRILNCE  267 (349)
T ss_dssp             EECCCC-------------------CGGGSCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCTTCHHHHHHHHHTTC
T ss_pred             EEccCccccccC---cccccccccCCCCccCHHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCcccHHHHHHHHhCC
Confidence            999999986432   1222345678999999999999899999999999999999999999996543220       011


Q ss_pred             eeeecCcchhhhhHHHHHHHHHHHHhcCCCCCChHHHHHHHHHHHH
Q 018699          280 LVYLPKLSFKRYWKVELWKSLFTNLLNMSSGNDKEVLQNLQKSFQD  325 (351)
Q Consensus       280 ~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~~~~~~  325 (351)
                      .  ....+.....+ ..+.+||.+||..||++||++.|+|+|||..
T Consensus       268 ~--~~~~~~~~~~~-~~~~~li~~~L~~dP~~Rpt~~e~l~hp~~~  310 (349)
T 2w4o_A          268 Y--YFISPWWDEVS-LNAKDLVRKLIVLDPKKRLTTFQALQHPWVT  310 (349)
T ss_dssp             C--CCCTTTTTTSC-HHHHHHHHTTSCSSGGGSCCHHHHHHSTTTT
T ss_pred             C--ccCCchhhhCC-HHHHHHHHHHccCChhhCcCHHHHhcCcccC
Confidence            0  01111112233 7899999999999999999999999999743

>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A

Probab=100.00  E-value=8.6e-44  Score=321.52  Aligned_cols=256  Identities=19%  Similarity=0.180  Sum_probs=199.7

Q ss_pred             CeeEEEEEEeeccCceEEEEEEecCCCCceEEEEecCCCCCh------HHHHHHHHHhhhccccccccccceeeecccCe
Q 018699           47 GKKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFPW------EFYMYRQLDQRISGRERSSFGFAHRIHLYSDY  120 (351)
Q Consensus        47 ~~~Y~i~~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~~~------e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  120 (351)
                      .++|++.+.||+|+||+||+|+ +..+|+.||+|++......      ....+......+....|++++.+..++...+.
T Consensus        11 ~~~y~~~~~lg~G~~g~V~~~~-~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~   89 (321)
T 2a2a_A           11 EDFYDIGEELGSGQFAIVKKCR-EKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVITLHDVYENRTD   89 (321)
T ss_dssp             HHHEEEEEEEEECSSEEEEEEE-ETTTCCEEEEEEEEBCSSSSCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSE
T ss_pred             hccEEEeeEeeecCCEEEEEEE-ECCCCeEEEEEEEecccccccccchhHHHHHHHHHHHHhCCCCCcceEEEEEecCCE
Confidence            4689999999999999999999 5678899999998654221      11222222233344568888888888888899


Q ss_pred             eEEEEEecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeeccCCCCC
Q 018699          121 SILVCDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSGP  200 (351)
Q Consensus       121 ~~lv~e~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~~~~~  200 (351)
                      .++||||+++++|.+++..    +..+++..++.++.|++.||.|||++||+|+||+|+||+++.++.            
T Consensus        90 ~~lv~e~~~~~~L~~~l~~----~~~~~~~~~~~i~~qi~~aL~~lH~~~ivH~dikp~NIl~~~~~~------------  153 (321)
T 2a2a_A           90 VVLILELVSGGELFDFLAQ----KESLSEEEATSFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNI------------  153 (321)
T ss_dssp             EEEEECCCCSCBHHHHHHT----CSCEEHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESCTTS------------
T ss_pred             EEEEEEcCCCCcHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCChHHEEEecCCC------------
Confidence            9999999999999999976    578999999999999999999999999999999999999983321            


Q ss_pred             cccCCeEEeecCCccccccCCCCccccccccCCCcccceeccCCCCCccchHhHHHHHHHHHHhCccccccccCCCCCce
Q 018699          201 WQDQGLCLVDWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQEKKPWKFQVDTYGLCAIVHMMLHNSYMEIEKKASPDGGL  280 (351)
Q Consensus       201 ~~~~~~~l~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~p~~~~~~~~~~~~  280 (351)
                       ....++|+|||++.....   ........||+.|+|||++.+..++.++|||||||++|+|++|..||...........
T Consensus       154 -~~~~~kl~Dfg~~~~~~~---~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~  229 (321)
T 2a2a_A          154 -PIPHIKLIDFGLAHEIED---GVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLAN  229 (321)
T ss_dssp             -SSCCEEECCCTTCEECCT---TCCCCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHH
T ss_pred             -CcCCEEEccCccceecCc---cccccccCCCCCccCcccccCCCCCCccccHHHHHHHHHHHHCCCCCCCCCHHHHHHH
Confidence             122699999999865432   2233455789999999999999999999999999999999999999965432100000


Q ss_pred             e----eecCcchhhhhHHHHHHHHHHHHhcCCCCCChHHHHHHHHHHH
Q 018699          281 V----YLPKLSFKRYWKVELWKSLFTNLLNMSSGNDKEVLQNLQKSFQ  324 (351)
Q Consensus       281 ~----~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~~~~~  324 (351)
                      .    ...........+ +.+.+||.+||.+||++||++.|+++|||.
T Consensus       230 i~~~~~~~~~~~~~~~~-~~~~~li~~~l~~dp~~Rps~~e~l~hp~~  276 (321)
T 2a2a_A          230 ITSVSYDFDEEFFSHTS-ELAKDFIRKLLVKETRKRLTIQEALRHPWI  276 (321)
T ss_dssp             HHTTCCCCCHHHHTTCC-HHHHHHHHTTSCSSTTTSCCHHHHHHSTTT
T ss_pred             HHhcccccChhhhcccC-HHHHHHHHHHcCCChhhCcCHHHHhcCccc
Confidence            0    011111222233 789999999999999999999999999874

>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A*

Probab=100.00  E-value=8.6e-45  Score=337.53  Aligned_cols=257  Identities=17%  Similarity=0.228  Sum_probs=199.1

Q ss_pred             EEcCeeEEEEEEeeccCceEEEEEEecCCCCceEEEEecCCCCC---hHHHHHHHHHhhhccccccccccceeeecccCe
Q 018699           44 EIGGKKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFP---WEFYMYRQLDQRISGRERSSFGFAHRIHLYSDY  120 (351)
Q Consensus        44 ~i~~~~Y~i~~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~~---~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  120 (351)
                      .+..++|++.+.||+|+||+||+|+ +..+++.||+|++.+...   .....+...........|++++.+...+..++.
T Consensus        65 ~~~~~~y~~~~~LG~G~fG~V~~~~-~~~~~~~~AiK~~~k~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~  143 (410)
T 3v8s_A           65 RMKAEDYEVVKVIGRGAFGEVQLVR-HKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDDRY  143 (410)
T ss_dssp             SCCGGGEEEEEEEEECSSEEEEEEE-ETTTCCEEEEEEEEHHHHHHTCCCSTHHHHHHHHHHCCCTTBCCEEEEEECSSE
T ss_pred             ccCccccEEEEEEEcCCCEEEEEEE-ECCCCcEEEEEEEehhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEECCE
Confidence            3456799999999999999999999 567889999999753110   000111111222334568889998888888999


Q ss_pred             eEEEEEecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeeccCCCCC
Q 018699          121 SILVCDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSGP  200 (351)
Q Consensus       121 ~~lv~e~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~~~~~  200 (351)
                      +|+||||++||+|.+++..     ..+++..++.++.||+.||.|||++||+||||||+||+++                
T Consensus       144 ~~lV~E~~~gg~L~~~l~~-----~~~~e~~~~~~~~qi~~aL~~LH~~givHrDLKp~NILl~----------------  202 (410)
T 3v8s_A          144 LYMVMEYMPGGDLVNLMSN-----YDVPEKWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLLD----------------  202 (410)
T ss_dssp             EEEEECCCTTEEHHHHHHH-----CCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEC----------------
T ss_pred             EEEEEeCCCCCcHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeeEC----------------
Confidence            9999999999999999875     4689999999999999999999999999999999999999                


Q ss_pred             cccCCeEEeecCCccccccCCCCccccccccCCCcccceeccCCC----CCccchHhHHHHHHHHHHhCccccccccCCC
Q 018699          201 WQDQGLCLVDWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQEKKP----WKFQVDTYGLCAIVHMMLHNSYMEIEKKASP  276 (351)
Q Consensus       201 ~~~~~~~l~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~----~~~~~DiwslG~il~~l~~g~~p~~~~~~~~  276 (351)
                       .++.+||+|||++...... ........+||+.|+|||++.+..    ++.++|||||||++|+|++|..||...+...
T Consensus       203 -~~g~ikL~DFG~a~~~~~~-~~~~~~~~~gt~~Y~APE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~  280 (410)
T 3v8s_A          203 -KSGHLKLADFGTCMKMNKE-GMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVG  280 (410)
T ss_dssp             -TTSCEEECCCTTCEECCTT-SEEECCSCCSCGGGCCHHHHHTTTTTCEEETHHHHHHHHHHHHHHHHSSCTTCCSSHHH
T ss_pred             -CCCCEEEeccceeEeeccC-CcccccCCcCCccccCHHHhhccCCCcCCCCcceEecchHHHHHHHhCCCCCCCCChhh
Confidence             7888999999998653311 111234668999999999997655    7899999999999999999999997554321


Q ss_pred             CCceeee--cCcchh--hhhHHHHHHHHHHHHhcCCCCC--ChHHHHHHHHHHHH
Q 018699          277 DGGLVYL--PKLSFK--RYWKVELWKSLFTNLLNMSSGN--DKEVLQNLQKSFQD  325 (351)
Q Consensus       277 ~~~~~~~--~~~~~~--~~~~~~~~~~li~~~L~~dP~~--R~s~~e~l~~~~~~  325 (351)
                      ....+..  ....+|  ...+ +.+++||.+||..+|.+  |+++.|+++|||..
T Consensus       281 ~~~~i~~~~~~~~~p~~~~~s-~~~~~li~~lL~~~~~rlgR~~~~ei~~Hp~f~  334 (410)
T 3v8s_A          281 TYSKIMNHKNSLTFPDDNDIS-KEAKNLICAFLTDREVRLGRNGVEEIKRHLFFK  334 (410)
T ss_dssp             HHHHHHTHHHHCCCCTTCCCC-HHHHHHHHHHSSCGGGCTTSSCHHHHHTSGGGC
T ss_pred             HHHHHHhccccccCCCccccc-HHHHHHHHHHccChhhhCCCCCHHHHhcCcccc
Confidence            1111100  011111  1233 88999999999999998  99999999998743

>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A

Probab=100.00  E-value=6.8e-44  Score=322.71  Aligned_cols=253  Identities=19%  Similarity=0.252  Sum_probs=178.2

Q ss_pred             eeEEEE---EEeeccCceEEEEEEecCCCCceEEEEecCCCCChHHHHHHHHHhhhccccccccccceeeecccCeeEEE
Q 018699           48 KKYQIK---GCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFPWEFYMYRQLDQRISGRERSSFGFAHRIHLYSDYSILV  124 (351)
Q Consensus        48 ~~Y~i~---~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv  124 (351)
                      ++|++.   +.||+|+||+||+|. +..+++.||||++.+...  ....+++........|++++.+..++..++..|+|
T Consensus         8 ~~y~~~~~~~~lG~G~~g~V~~~~-~~~~~~~vavK~~~~~~~--~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv   84 (325)
T 3kn6_A            8 QHYDLDLKDKPLGEGSFSICRKCV-HKKSNQAFAVKIISKRME--ANTQKEITALKLCEGHPNIVKLHEVFHDQLHTFLV   84 (325)
T ss_dssp             HHEEECTTSCCSEEETTEEEEEEE-ETTTCCEEEEEEEEGGGH--HHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEE
T ss_pred             hccccccCCCccccCCCeEEEEEE-ECCCCCEEEEEEEChhhh--hhHHHHHHHHHHhcCCCCeeEEEEEEEcCCEEEEE
Confidence            467876   789999999999999 567889999999875432  22223332222223488999999998889999999


Q ss_pred             EEecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeeccCCCCCcccC
Q 018699          125 CDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSGPWQDQ  204 (351)
Q Consensus       125 ~e~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~~~~~~~~~  204 (351)
                      |||+++++|.+++..    +..+++..++.++.|++.||.|||++||+||||||+||+++.++              ...
T Consensus        85 ~e~~~~~~L~~~l~~----~~~~~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~--------------~~~  146 (325)
T 3kn6_A           85 MELLNGGELFERIKK----KKHFSETEASYIMRKLVSAVSHMHDVGVVHRDLKPENLLFTDEN--------------DNL  146 (325)
T ss_dssp             ECCCCSCBHHHHHHH----CSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEEC------------------C
T ss_pred             EEccCCCcHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCHHHEEEecCC--------------Ccc
Confidence            999999999999987    57899999999999999999999999999999999999998432              223


Q ss_pred             CeEEeecCCccccccCCCCccccccccCCCcccceeccCCCCCccchHhHHHHHHHHHHhCccccccccCCCCCce----
Q 018699          205 GLCLVDWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQEKKPWKFQVDTYGLCAIVHMMLHNSYMEIEKKASPDGGL----  280 (351)
Q Consensus       205 ~~~l~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~p~~~~~~~~~~~~----  280 (351)
                      .++|+|||++....  .........+||+.|+|||++.+..++.++|||||||++|+|++|..||...........    
T Consensus       147 ~~kl~Dfg~a~~~~--~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~~~  224 (325)
T 3kn6_A          147 EIKIIDFGFARLKP--PDNQPLKTPCFTLHYAAPELLNQNGYDESCDLWSLGVILYTMLSGQVPFQSHDRSLTCTSAVEI  224 (325)
T ss_dssp             EEEECCCTTCEECC--C----------------------CCCCHHHHHHHHHHHHHHHHHSSCTTC-------CCCHHHH
T ss_pred             cEEEeccccceecC--CCCCcccccCCCcCccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCccccccccHHHH
Confidence            69999999986432  223334556789999999999999999999999999999999999999976443211000    


Q ss_pred             ---e----eecCcchhhhhHHHHHHHHHHHHhcCCCCCChHHHHHHHHHHH
Q 018699          281 ---V----YLPKLSFKRYWKVELWKSLFTNLLNMSSGNDKEVLQNLQKSFQ  324 (351)
Q Consensus       281 ---~----~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~~~~~  324 (351)
                         .    ...........+ +.+++||.+||.+||.+||++.|+++|+|.
T Consensus       225 ~~~i~~~~~~~~~~~~~~~s-~~~~~li~~~L~~dP~~Rpt~~ell~h~w~  274 (325)
T 3kn6_A          225 MKKIKKGDFSFEGEAWKNVS-QEAKDLIQGLLTVDPNKRLKMSGLRYNEWL  274 (325)
T ss_dssp             HHHHTTTCCCCCSHHHHTSC-HHHHHHHHHHHCCCTTTCCCTTTSTTCGGG
T ss_pred             HHHHHcCCCCCCcccccCCC-HHHHHHHHHHCCCChhHCCCHHHHhcChhh
Confidence               0    001111111233 789999999999999999999999999874

>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II}

Probab=100.00  E-value=2.3e-44  Score=333.68  Aligned_cols=252  Identities=19%  Similarity=0.243  Sum_probs=181.7

Q ss_pred             eeEEEEEEeeccCceEEEEEEecCCCCceEEEEecCCCCChHHHH---HHHHHhhhccccccccccceeeecc--cCeeE
Q 018699           48 KKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFPWEFYM---YRQLDQRISGRERSSFGFAHRIHLY--SDYSI  122 (351)
Q Consensus        48 ~~Y~i~~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~~~e~~~---~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~  122 (351)
                      ++|++.+.||+|+||+||+|. +..+|+.||||++..........   ++++........|++++.+..++..  ...+|
T Consensus         9 ~~y~~~~~lG~G~~g~V~~~~-~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~l~~~~~~~~~~~~~   87 (388)
T 3oz6_A            9 RKYELVKKLGKGAYGIVWKSI-DRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHENIVNLLNVLRADNDRDVY   87 (388)
T ss_dssp             TTEEEEEC-------CEEEEE-ETTTCCEEEEEEECC--CCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECTTSSCEE
T ss_pred             CceEEEEEeeeCCCeEEEEEE-ECCCCCEEEEEEecccccChHHHHHHHHHHHHHHhccCCCCCCeeeeEEecCCCCEEE
Confidence            689999999999999999999 57889999999987654433322   2222222222248888888887754  34789


Q ss_pred             EEEEecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeeccCCCCCcc
Q 018699          123 LVCDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSGPWQ  202 (351)
Q Consensus       123 lv~e~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~~~~~~~  202 (351)
                      +||||+. ++|..++..     ..+++..+..++.||+.||+|||++||+||||||+||+++                 .
T Consensus        88 lv~e~~~-~~L~~~~~~-----~~~~~~~~~~i~~qi~~~L~~LH~~~ivHrDlkp~NIll~-----------------~  144 (388)
T 3oz6_A           88 LVFDYME-TDLHAVIRA-----NILEPVHKQYVVYQLIKVIKYLHSGGLLHRDMKPSNILLN-----------------A  144 (388)
T ss_dssp             EEEECCS-EEHHHHHHH-----TCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEC-----------------T
T ss_pred             EEecccC-cCHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHhCCEEeCCCCHHHeEEc-----------------C
Confidence            9999995 699998876     4789999999999999999999999999999999999999                 7


Q ss_pred             cCCeEEeecCCccccccC-------------------CCCccccccccCCCcccceeccC-CCCCccchHhHHHHHHHHH
Q 018699          203 DQGLCLVDWGRGIDLHLF-------------------PDNMEFEGDCRTSGFRCIEMQEK-KPWKFQVDTYGLCAIVHMM  262 (351)
Q Consensus       203 ~~~~~l~Dfg~a~~~~~~-------------------~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~~DiwslG~il~~l  262 (351)
                      ++.+||+|||++......                   .........+||+.|+|||++.+ ..++.++|||||||++|+|
T Consensus       145 ~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~el  224 (388)
T 3oz6_A          145 ECHVKVADFGLSRSFVNIRRVTNNIPLSINENTENFDDDQPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEI  224 (388)
T ss_dssp             TCCEEECCCTTCEESSSCCCCCCCGGGCCC---------------CCCGGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHH
T ss_pred             CCCEEecCCcccccccccccccccccccccccccccccccccccCCcccCCcCCHHHhcCCCCCCChhhHHHHHHHHHHH
Confidence            788999999998653211                   01122345679999999999976 6789999999999999999


Q ss_pred             HhCccccccccCCCCCcee----------------------------------e-ecCcchh------------hhhHHH
Q 018699          263 LHNSYMEIEKKASPDGGLV----------------------------------Y-LPKLSFK------------RYWKVE  295 (351)
Q Consensus       263 ~~g~~p~~~~~~~~~~~~~----------------------------------~-~~~~~~~------------~~~~~~  295 (351)
                      ++|.+||...........+                                  . .....++            ...+ +
T Consensus       225 l~g~~pf~~~~~~~~~~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~  303 (388)
T 3oz6_A          225 LCGKPIFPGSSTMNQLERIIGVIDFPSNEDVESIQSPFAKTMIESLKEKVEIRQSNKRDIFTKWKNLLLKINPKADCN-E  303 (388)
T ss_dssp             HHSSCSCCCSSHHHHHHHHHHHHCCCCHHHHHTSCCSSHHHHHHHHHHHCC-----CCCCHHHHHHHHHHHCTTCCCC-H
T ss_pred             HhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHhccCHHHHHHHHhCcccccccCCCHHHhCcchhhhcccccccccCC-H
Confidence            9999999654321000000                                  0 0000000            0122 6


Q ss_pred             HHHHHHHHHhcCCCCCChHHHHHHHHHHH
Q 018699          296 LWKSLFTNLLNMSSGNDKEVLQNLQKSFQ  324 (351)
Q Consensus       296 ~~~~li~~~L~~dP~~R~s~~e~l~~~~~  324 (351)
                      .+.+||.+||..||++|||+.|+|+|||.
T Consensus       304 ~~~dll~~~L~~dP~~R~t~~e~l~Hp~~  332 (388)
T 3oz6_A          304 EALDLLDKLLQFNPNKRISANDALKHPFV  332 (388)
T ss_dssp             HHHHHHHHHCCSSGGGSCCHHHHTTSTTT
T ss_pred             HHHHHHHHhhccCcccCCCHHHHhCCHHH
Confidence            78999999999999999999999999984

>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A

Probab=100.00  E-value=3.4e-43  Score=312.74  Aligned_cols=251  Identities=18%  Similarity=0.222  Sum_probs=190.5

Q ss_pred             eeEEEEEEeeccCceEEEEEEecCCCCceEEEEecCCCCChH--HHHHHHHHhhhccccccccccceeeecccCeeEEEE
Q 018699           48 KKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFPWE--FYMYRQLDQRISGRERSSFGFAHRIHLYSDYSILVC  125 (351)
Q Consensus        48 ~~Y~i~~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~~~e--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~  125 (351)
                      ++|++.+.||+|+||+||+|++  .+++.||+|++......+  ...............|++++.+..+....+..++||
T Consensus         2 ~~y~~~~~lg~G~~g~V~~~~~--~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~   79 (288)
T 1ob3_A            2 EKYHGLEKIGEGTYGVVYKAQN--NYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVIHTKKRLVLVF   79 (288)
T ss_dssp             CSEEEEEEEEEETTEEEEEEEE--TTSCEEEEEEECCSSGGGCCCHHHHHHHHGGGGCCCTTBCCEEEEEECSSCEEEEE
T ss_pred             ccchhhhhcccCCCEEEEEEEc--CCCCEEEEEEEeccccccccchhHHHHHHHHHhcCCCCEeeeeeEEccCCeEEEEE
Confidence            5799999999999999999994  568899999987543322  122222233345567889999998888889999999


Q ss_pred             EecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeeccCCCCCcccCC
Q 018699          126 DYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSGPWQDQG  205 (351)
Q Consensus       126 e~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~~~~~~~~~~  205 (351)
                      ||++ ++|.+++...   ...+++..++.++.|++.||.|||++||+||||||+||+++                 .++.
T Consensus        80 e~~~-~~l~~~~~~~---~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~-----------------~~~~  138 (288)
T 1ob3_A           80 EHLD-QDLKKLLDVC---EGGLESVTAKSFLLQLLNGIAYCHDRRVLHRDLKPQNLLIN-----------------REGE  138 (288)
T ss_dssp             ECCS-EEHHHHHHTS---TTCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEC-----------------TTSC
T ss_pred             EecC-CCHHHHHHhc---ccCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEc-----------------CCCC
Confidence            9995 5999988764   46789999999999999999999999999999999999999                 7788


Q ss_pred             eEEeecCCccccccCCCCccccccccCCCcccceeccC-CCCCccchHhHHHHHHHHHHhCccccccccCCC--------
Q 018699          206 LCLVDWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQEK-KPWKFQVDTYGLCAIVHMMLHNSYMEIEKKASP--------  276 (351)
Q Consensus       206 ~~l~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~~DiwslG~il~~l~~g~~p~~~~~~~~--------  276 (351)
                      +||+|||++.....  .........+|+.|+|||++.+ ..++.++|||||||++|+|++|..||.......        
T Consensus       139 ~kl~Dfg~~~~~~~--~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~  216 (288)
T 1ob3_A          139 LKIADFGLARAFGI--PVRKYTHEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRI  216 (288)
T ss_dssp             EEECCTTHHHHHCC-----------CCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHH
T ss_pred             EEEeECccccccCc--cccccccccccccccCchheeCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHH
Confidence            99999998865321  1223344578999999999876 458899999999999999999999986432110        


Q ss_pred             -----C-------------CceeeecCc---chhhhhHHHHHHHHHHHHhcCCCCCChHHHHHHHHHHH
Q 018699          277 -----D-------------GGLVYLPKL---SFKRYWKVELWKSLFTNLLNMSSGNDKEVLQNLQKSFQ  324 (351)
Q Consensus       277 -----~-------------~~~~~~~~~---~~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~~~~~  324 (351)
                           .             .......+.   ......+ +.+.+||.+||.+||++|||+.|+++|||.
T Consensus       217 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~li~~~L~~dP~~Rpt~~e~l~hp~f  284 (288)
T 1ob3_A          217 LGTPNSKNWPNVTELPKYDPNFTVYEPLPWESFLKGLD-ESGIDLLSKMLKLDPNQRITAKQALEHAYF  284 (288)
T ss_dssp             HCCCCTTTSTTGGGSTTCCTTCCCCCCCCGGGTCCSCC-HHHHHHHHHHTCSSTTTSCCHHHHHTSGGG
T ss_pred             HCCCChhhchhhhcccccccccccccCccHHHHhhhcC-HHHHHHHHHHcCCCcccCCCHHHHhcCcch
Confidence                 0             000000000   1111233 788999999999999999999999999863

>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*

Probab=100.00  E-value=1e-43  Score=315.17  Aligned_cols=256  Identities=20%  Similarity=0.216  Sum_probs=200.8

Q ss_pred             CeeEEEEEEeeccCceEEEEEEecCCCCceEEEEecCCCCCh--HHHHHHHHHhhhccccccccccceeeecccCeeEEE
Q 018699           47 GKKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFPW--EFYMYRQLDQRISGRERSSFGFAHRIHLYSDYSILV  124 (351)
Q Consensus        47 ~~~Y~i~~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~~~--e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv  124 (351)
                      .++|++.+.||+|+||+||+|. +..+++.||+|++......  +...+...........|++++.+..++..++..++|
T Consensus         5 ~~~y~~~~~lg~G~~g~V~~~~-~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v   83 (284)
T 3kk8_A            5 SDNYDVKEELGKGAFSVVRRCV-HKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLV   83 (284)
T ss_dssp             TTTEEEEEEEEEETTEEEEEEE-ETTTCCEEEEEEEEGGGCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred             hhhhhhhhhhcCcCCeEEEEEE-EcCCCceEEEEEeecccCCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEcCCEEEEE
Confidence            5789999999999999999999 5677899999998654322  222222223334455688899988888888999999


Q ss_pred             EEecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeeccCCCCCcccC
Q 018699          125 CDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSGPWQDQ  204 (351)
Q Consensus       125 ~e~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~~~~~~~~~  204 (351)
                      |||+++++|.+.+...    ..+++..++.++.|++.|+.|||++||+|+||+|+||+++.++              ..+
T Consensus        84 ~e~~~~~~l~~~~~~~----~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dikp~Nil~~~~~--------------~~~  145 (284)
T 3kk8_A           84 FDLVTGGELFEDIVAR----EFYSEADASHCIQQILESIAYCHSNGIVHRNLKPENLLLASKA--------------KGA  145 (284)
T ss_dssp             ECCCCSCBHHHHHHHH----SSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEESSSS--------------TTC
T ss_pred             EecCCCCCHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHHCCcCcCCCCHHHEEEecCC--------------CCC
Confidence            9999999999988873    6799999999999999999999999999999999999998432              234


Q ss_pred             CeEEeecCCccccccCCCCccccccccCCCcccceeccCCCCCccchHhHHHHHHHHHHhCccccccccCCCCCcee---
Q 018699          205 GLCLVDWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQEKKPWKFQVDTYGLCAIVHMMLHNSYMEIEKKASPDGGLV---  281 (351)
Q Consensus       205 ~~~l~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~p~~~~~~~~~~~~~---  281 (351)
                      .++|+|||.+....   .........|++.|+|||++.+..++.++||||||+++|+|++|..||............   
T Consensus       146 ~~kl~Dfg~~~~~~---~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~  222 (284)
T 3kk8_A          146 AVKLADFGLAIEVN---DSEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAG  222 (284)
T ss_dssp             CEEECCCTTCEECC---SSCBCCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHT
T ss_pred             cEEEeeceeeEEcc---cCccccCCCCCcCCcCchhhcCCCCCcccchHHHHHHHHHHHHCCCCCCCCchhHHHHHHHhc
Confidence            59999999986543   222334567899999999999999999999999999999999999999654322000000   


Q ss_pred             -eecCcchhhhhHHHHHHHHHHHHhcCCCCCChHHHHHHHHHHHH
Q 018699          282 -YLPKLSFKRYWKVELWKSLFTNLLNMSSGNDKEVLQNLQKSFQD  325 (351)
Q Consensus       282 -~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~~~~~~  325 (351)
                       .....+.....+ +.+.+||.+||++||++||++.|+++|+|..
T Consensus       223 ~~~~~~~~~~~~~-~~~~~li~~~l~~dp~~Rps~~~~l~h~~~~  266 (284)
T 3kk8_A          223 AYDYPSPEWDTVT-PEAKSLIDSMLTVNPKKRITADQALKVPWIC  266 (284)
T ss_dssp             CCCCCTTTTTTSC-HHHHHHHHHHSCSSTTTSCCHHHHTTSHHHH
T ss_pred             cccCCchhhcccC-HHHHHHHHHHcccChhhCCCHHHHhcCcccc
Confidence             001111112233 7899999999999999999999999998753

>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...

Probab=100.00  E-value=5.3e-44  Score=317.25  Aligned_cols=253  Identities=17%  Similarity=0.168  Sum_probs=201.0

Q ss_pred             cCeeEEEEEEeeccCceEEEEEEecCCCCceEEEEecCCCCChH---HHHHHHHHhhhccccccccccceeeecccCeeE
Q 018699           46 GGKKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFPWE---FYMYRQLDQRISGRERSSFGFAHRIHLYSDYSI  122 (351)
Q Consensus        46 ~~~~Y~i~~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~~~e---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  122 (351)
                      ..++|++.+.||+|+||+||+|. +..+++.||+|++.......   ...+...........|++++....+....+..+
T Consensus        12 ~~~~y~~~~~lg~G~~g~Vy~~~-~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~   90 (284)
T 2vgo_A           12 TIDDFDIGRPLGKGKFGNVYLAR-EKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYNYFHDRKRIY   90 (284)
T ss_dssp             CGGGEEEEEEEEECSSEEEEEEE-ETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEE
T ss_pred             hhhhceeeheecCCCCeEEEEEE-EcCCCcEEEEEEEcccccchHHHHHHHHHHHHHHhcCCCCCEeeEEEEEEcCCEEE
Confidence            45789999999999999999999 56778999999986431110   112222223334456888888888888889999


Q ss_pred             EEEEecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeeccCCCCCcc
Q 018699          123 LVCDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSGPWQ  202 (351)
Q Consensus       123 lv~e~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~~~~~~~  202 (351)
                      +||||+++++|.+++...    ..+++..++.++.|++.|+.|||++||+|+||+|+||+++                 .
T Consensus        91 lv~e~~~~~~L~~~l~~~----~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nil~~-----------------~  149 (284)
T 2vgo_A           91 LMLEFAPRGELYKELQKH----GRFDEQRSATFMEELADALHYCHERKVIHRDIKPENLLMG-----------------Y  149 (284)
T ss_dssp             EEECCCTTEEHHHHHHHH----SSCCHHHHHHHHHHHHHHHHHHHTTTEECCCCSGGGEEEC-----------------T
T ss_pred             EEEEeCCCCcHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCHHHEEEc-----------------C
Confidence            999999999999999874    5789999999999999999999999999999999999998                 6


Q ss_pred             cCCeEEeecCCccccccCCCCccccccccCCCcccceeccCCCCCccchHhHHHHHHHHHHhCccccccccCCCCCceee
Q 018699          203 DQGLCLVDWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQEKKPWKFQVDTYGLCAIVHMMLHNSYMEIEKKASPDGGLVY  282 (351)
Q Consensus       203 ~~~~~l~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~p~~~~~~~~~~~~~~  282 (351)
                      ++.++|+|||++....    ........|++.|+|||++.+..++.++||||||+++|+|++|..||.............
T Consensus       150 ~~~~kl~Dfg~~~~~~----~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~  225 (284)
T 2vgo_A          150 KGELKIADFGWSVHAP----SLRRRTMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRRIV  225 (284)
T ss_dssp             TCCEEECCCTTCEECS----SSCBCCCCSCGGGCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHH
T ss_pred             CCCEEEecccccccCc----ccccccccCCCCcCCHHHhccCCCCcccchhhHHHHHHHHHHCCCCCCCCCHhHHHHHHh
Confidence            7789999999886433    222344578999999999999889999999999999999999999996543221111111


Q ss_pred             ecCcchhhhhHHHHHHHHHHHHhcCCCCCChHHHHHHHHHHHH
Q 018699          283 LPKLSFKRYWKVELWKSLFTNLLNMSSGNDKEVLQNLQKSFQD  325 (351)
Q Consensus       283 ~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~~~~~~  325 (351)
                      .....++...+ +.+.+||.+||..||.+||++.+++.|+|..
T Consensus       226 ~~~~~~~~~~~-~~~~~li~~~l~~~p~~Rps~~~ll~h~~~~  267 (284)
T 2vgo_A          226 NVDLKFPPFLS-DGSKDLISKLLRYHPPQRLPLKGVMEHPWVK  267 (284)
T ss_dssp             TTCCCCCTTSC-HHHHHHHHHHSCSSGGGSCCHHHHHTCHHHH
T ss_pred             ccccCCCCcCC-HHHHHHHHHHhhcCHhhCCCHHHHhhCHHHH
Confidence            12223334444 7899999999999999999999999998754

>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A*

Probab=100.00  E-value=9.9e-45  Score=339.61  Aligned_cols=259  Identities=19%  Similarity=0.252  Sum_probs=200.6

Q ss_pred             EEcCeeEEEEEEeeccCceEEEEEEecCCCCceEEEEecCCCCC---hHHHHHHHHHhhhccccccccccceeeecccCe
Q 018699           44 EIGGKKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFP---WEFYMYRQLDQRISGRERSSFGFAHRIHLYSDY  120 (351)
Q Consensus        44 ~i~~~~Y~i~~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~~---~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  120 (351)
                      .+..++|++.++||+|+||+||+|+ +..+++.||+|++.+...   .+...+...........|++++.+...+...+.
T Consensus        70 ~~~~~~y~~~~~LG~G~fG~V~~~~-~~~~~~~vAvK~~~~~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~~~~~  148 (437)
T 4aw2_A           70 RLHREDFEILKVIGRGAFGEVAVVK-LKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDSKWITTLHYAFQDDNN  148 (437)
T ss_dssp             SCCGGGEEEEEEEEECSSEEEEEEE-ETTTTEEEEEEEEEHHHHHHTTTTCCHHHHHHHHHHSCTTTBCCEEEEEECSSE
T ss_pred             cCChhheEEEEEEEeCCCEEEEEEE-EcCCCcEEEEEEEEHHHhhhHHHHHHHHHHHHHHHhCCCCCEEEEEEEEeeCCE
Confidence            3456799999999999999999999 567889999999864210   011111222222334568888888888888999


Q ss_pred             eEEEEEecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeeccCCCCC
Q 018699          121 SILVCDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSGP  200 (351)
Q Consensus       121 ~~lv~e~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~~~~~  200 (351)
                      +|+||||++||+|.+++...   +..+++..++.++.||+.||.|||++||+||||||+||+++                
T Consensus       149 ~~lV~Ey~~gg~L~~~l~~~---~~~l~e~~~~~~~~qi~~aL~~LH~~giiHrDLKp~NILl~----------------  209 (437)
T 4aw2_A          149 LYLVMDYYVGGDLLTLLSKF---EDRLPEEMARFYLAEMVIAIDSVHQLHYVHRDIKPDNILMD----------------  209 (437)
T ss_dssp             EEEEECCCTTCBHHHHHHTT---TTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEC----------------
T ss_pred             EEEEEecCCCCcHHHHHHHc---cCCCCHHHHHHHHHHHHHHHHHHHhCCeEecccCHHHeeEc----------------
Confidence            99999999999999999864   46799999999999999999999999999999999999999                


Q ss_pred             cccCCeEEeecCCccccccCCCCccccccccCCCcccceecc-----CCCCCccchHhHHHHHHHHHHhCccccccccCC
Q 018699          201 WQDQGLCLVDWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQE-----KKPWKFQVDTYGLCAIVHMMLHNSYMEIEKKAS  275 (351)
Q Consensus       201 ~~~~~~~l~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~-----~~~~~~~~DiwslG~il~~l~~g~~p~~~~~~~  275 (351)
                       .++.+||+|||++..... .........+||+.|+|||++.     +..++.++|||||||++|+|++|..||...+..
T Consensus       210 -~~g~vkL~DFGla~~~~~-~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~~~~~~DvwSlGvil~elltG~~Pf~~~~~~  287 (437)
T 4aw2_A          210 -MNGHIRLADFGSCLKLME-DGTVQSSVAVGTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETPFYAESLV  287 (437)
T ss_dssp             -TTSCEEECCCTTCEECCT-TSCEECCSCCSCGGGCCHHHHHHHHTSCCEECTHHHHHHHHHHHHHHHHSSCTTCCSSHH
T ss_pred             -CCCCEEEcchhhhhhccc-CCCcccccccCCcCeeChHHHhhcccCCCCCCCcCeeHHHHHHHHHHHhCCCCCCCCChh
Confidence             788899999999865331 1122234468999999999986     466889999999999999999999999764432


Q ss_pred             CCCceee--ecCcchhh---hhHHHHHHHHHHHHhcCCCCC--ChHHHHHHHHHHHH
Q 018699          276 PDGGLVY--LPKLSFKR---YWKVELWKSLFTNLLNMSSGN--DKEVLQNLQKSFQD  325 (351)
Q Consensus       276 ~~~~~~~--~~~~~~~~---~~~~~~~~~li~~~L~~dP~~--R~s~~e~l~~~~~~  325 (351)
                      .....+.  .....+|.   ..+ +.+++||++||..+|++  |+++.|+++|||..
T Consensus       288 ~~~~~i~~~~~~~~~p~~~~~~s-~~~~dLi~~lL~~~~~r~~r~~~~eil~Hpff~  343 (437)
T 4aw2_A          288 ETYGKIMNHKERFQFPTQVTDVS-ENAKDLIRRLICSREHRLGQNGIEDFKKHPFFS  343 (437)
T ss_dssp             HHHHHHHTHHHHCCCCSSCCCSC-HHHHHHHHTTSSCGGGCTTTTTTHHHHTSGGGT
T ss_pred             HHHHhhhhccccccCCcccccCC-HHHHHHHHHHhcccccccCCCCHHHHhCCCccC
Confidence            1111110  01111222   134 88999999999998888  99999999998753

>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A*

Probab=100.00  E-value=4.2e-43  Score=329.50  Aligned_cols=255  Identities=18%  Similarity=0.206  Sum_probs=190.1

Q ss_pred             CeeEEEEEEeeccCceEEEEEEecCCCCceEEEEecCCCCChHHHH--HHHHHhhhccccccccccceeeeccc-----C
Q 018699           47 GKKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFPWEFYM--YRQLDQRISGRERSSFGFAHRIHLYS-----D  119 (351)
Q Consensus        47 ~~~Y~i~~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~~~e~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~-----~  119 (351)
                      .++|++.+.||+|+||+||+|+ +..+++.||||++..........  .......+....|++++.+..+....     +
T Consensus        25 ~~~y~~~~~lG~G~~g~V~~a~-~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~  103 (432)
T 3n9x_A           25 PDNYIIKHLIGRGSYGYVYLAY-DKNTEKNVAIKKVNRMFEDLIDCKRILREITILNRLKSDYIIRLYDLIIPDDLLKFD  103 (432)
T ss_dssp             CTTEEEEEEEEEETTEEEEEEE-ETTTTEEEEEEEECSTTTSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCC
T ss_pred             cCCEEEEEEEeecCCEEEEEEE-ECCCCcEEEEEEeCchhcChHHHHHHHHHHHHHHHcCCCCcceEEEEEecCCCCcCC
Confidence            5789999999999999999999 57889999999998654433221  11222233445678888887776554     5


Q ss_pred             eeEEEEEecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeeccCCCC
Q 018699          120 YSILVCDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSG  199 (351)
Q Consensus       120 ~~~lv~e~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~~~~  199 (351)
                      ..|+||||+ +++|.+++..    +..+++..++.++.||+.||+|||++||+||||||+||+++               
T Consensus       104 ~~~lv~e~~-~~~L~~~~~~----~~~l~~~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~---------------  163 (432)
T 3n9x_A          104 ELYIVLEIA-DSDLKKLFKT----PIFLTEEHIKTILYNLLLGENFIHESGIIHRDLKPANCLLN---------------  163 (432)
T ss_dssp             CEEEEEECC-SEEHHHHHHS----SCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEC---------------
T ss_pred             eEEEEEecC-CcCHHHHHhc----cCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHeEEC---------------
Confidence            789999999 5699999976    56799999999999999999999999999999999999999               


Q ss_pred             CcccCCeEEeecCCccccccCCCC--------------------ccccccccCCCcccceec-cCCCCCccchHhHHHHH
Q 018699          200 PWQDQGLCLVDWGRGIDLHLFPDN--------------------MEFEGDCRTSGFRCIEMQ-EKKPWKFQVDTYGLCAI  258 (351)
Q Consensus       200 ~~~~~~~~l~Dfg~a~~~~~~~~~--------------------~~~~~~~g~~~y~aPE~~-~~~~~~~~~DiwslG~i  258 (351)
                        .++.+||+|||++.........                    ......+||+.|+|||++ .+..++.++|||||||+
T Consensus       164 --~~~~~kL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~DiwSlG~i  241 (432)
T 3n9x_A          164 --QDCSVKVCDFGLARTINSEKDTNIVNDLEENEEPGPHNKNLKKQLTSHVVTRWYRAPELILLQENYTKSIDIWSTGCI  241 (432)
T ss_dssp             --TTCCEEECCCTTCEEC-------------------------------CCCCCTTCCHHHHTTCSCCCTHHHHHHHHHH
T ss_pred             --CCCCEEEccCCCcccccccccccccccccccccccccccchhccccCCCCCccccCHHHHhcCCCCCcccccchHHHH
Confidence              7788999999999754322111                    123566899999999986 56678999999999999


Q ss_pred             HHHHHhCccccccccCC----CCCce----------------------------------------------------ee
Q 018699          259 VHMMLHNSYMEIEKKAS----PDGGL----------------------------------------------------VY  282 (351)
Q Consensus       259 l~~l~~g~~p~~~~~~~----~~~~~----------------------------------------------------~~  282 (351)
                      +|+|++|..||......    ..+.-                                                    ..
T Consensus       242 l~ell~g~~p~~~~~~~~~p~f~g~~~~~~~~~~~~~~~~~~~~~~ql~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~  321 (432)
T 3n9x_A          242 FAELLNMLQSHINDPTNRFPLFPGSSCFPLSPDRNSKKVHEKSNRDQLNIIFNIIGTPTEDDLKNINKPEVIKYIKLFPH  321 (432)
T ss_dssp             HHHHHTTCTTTCSSGGGCCCSCCCSCSCC----------CHHHHHHHHHHHHHHHCSCCHHHHHTCCCHHHHHHHHTSCC
T ss_pred             HHHHHhcccccccccccccccCCCccccccCcccccccccccchHHHHHHHHHhcCCCCHHHHHhccCHHHHHHHHhCCC
Confidence            99999866555422100    00000                                                    00


Q ss_pred             ecCcchh---hhhHHHHHHHHHHHHhcCCCCCChHHHHHHHHHHHH
Q 018699          283 LPKLSFK---RYWKVELWKSLFTNLLNMSSGNDKEVLQNLQKSFQD  325 (351)
Q Consensus       283 ~~~~~~~---~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~~~~~~  325 (351)
                      .......   ...+ +.+.+||.+||..||.+|||+.|+|+|||..
T Consensus       322 ~~~~~~~~~~~~~s-~~~~dLl~~mL~~dP~~R~ta~e~L~Hp~f~  366 (432)
T 3n9x_A          322 RKPINLKQKYPSIS-DDGINLLESMLKFNPNKRITIDQALDHPYLK  366 (432)
T ss_dssp             CCCCCHHHHSTTSC-HHHHHHHHHHSCSSTTTSCCHHHHHTCGGGT
T ss_pred             CCCCCHHHHCCCCC-HHHHHHHHHHhcCCcccCCCHHHHhcChhhh
Confidence            0000000   1123 7889999999999999999999999999743

>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A*

Probab=100.00  E-value=9.7e-44  Score=315.57  Aligned_cols=267  Identities=15%  Similarity=0.111  Sum_probs=197.6

Q ss_pred             eeEEEEEEeeccCceEEEEEEecCCCCceEEEEecCCCCCh---HHHHHHHHHhhhccccccccccceeeecccCeeEEE
Q 018699           48 KKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFPW---EFYMYRQLDQRISGRERSSFGFAHRIHLYSDYSILV  124 (351)
Q Consensus        48 ~~Y~i~~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~~~---e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv  124 (351)
                      ++|++.+.||+|+||+||+|. +..+++.||+|++......   +...++++........|++++.+..++...+..++|
T Consensus        11 ~~y~~~~~lg~G~~g~V~~~~-~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~~h~~iv~~~~~~~~~~~~~lv   89 (289)
T 1x8b_A           11 TEFHELEKIGSGEFGSVFKCV-KRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHSHVVRYFSAWAEDDHMLIQ   89 (289)
T ss_dssp             HHEEEEEEEEEETTEEEEEEE-ETTTCCEEEEEEEECCCTTSHHHHHHHHHHHHHHHSCSCTTBCCEEEEEEETTEEEEE
T ss_pred             chhhhhhhhcCCCceEEEEEE-EcCCCceEEEEEecccccccHHHHHHHHHHHHHHHhCCCCCeeeeeeeeecCCeEEEE
Confidence            689999999999999999999 5678899999998764332   333344443333333788999999988889999999


Q ss_pred             EEecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeeccC--CCCCcc
Q 018699          125 CDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHD--RSGPWQ  202 (351)
Q Consensus       125 ~e~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~--~~~~~~  202 (351)
                      |||+++++|.+++.........+++..++.++.||+.||.|||++||+|+||||+||+++.+.......+..  ......
T Consensus        90 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dikp~NIl~~~~~~~~~~~~~~~~~~~~~~  169 (289)
T 1x8b_A           90 NEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIHSMSLVHMDIKPSNIFISRTSIPNAASEEGDEDDWASN  169 (289)
T ss_dssp             EECCTTCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEC--------------------
T ss_pred             EEecCCCcHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHHhCCEeecCCCHHHEEEcCCCCCcccccccccccccCC
Confidence            999999999999987654457799999999999999999999999999999999999998543211000000  000113


Q ss_pred             cCCeEEeecCCccccccCCCCccccccccCCCcccceeccCC-CCCccchHhHHHHHHHHHHhCccccccccCCCCCcee
Q 018699          203 DQGLCLVDWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQEKK-PWKFQVDTYGLCAIVHMMLHNSYMEIEKKASPDGGLV  281 (351)
Q Consensus       203 ~~~~~l~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~-~~~~~~DiwslG~il~~l~~g~~p~~~~~~~~~~~~~  281 (351)
                      ...++|+|||.+.....      .....|++.|+|||++.+. .++.++|||||||++|+|++|.+|+.......  ...
T Consensus       170 ~~~~kl~Dfg~~~~~~~------~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~~~~--~~~  241 (289)
T 1x8b_A          170 KVMFKIGDLGHVTRISS------PQVEEGDSRFLANEVLQENYTHLPKADIFALALTVVCAAGAEPLPRNGDQWH--EIR  241 (289)
T ss_dssp             CCCEEECCCTTCEETTC------SCCCCCCGGGCCHHHHTTCCTTHHHHHHHHHHHHHHHHTTCCCCCSSSHHHH--HHH
T ss_pred             ceEEEEcccccccccCC------ccccCCCccccChhHhcCCCCCCchhhHHHHHHHHHHHhcCCCCCcchhHHH--HHH
Confidence            45799999998865432      1223589999999999765 56689999999999999999987764322110  000


Q ss_pred             eecCcchhhhhHHHHHHHHHHHHhcCCCCCChHHHHHHHHHHH
Q 018699          282 YLPKLSFKRYWKVELWKSLFTNLLNMSSGNDKEVLQNLQKSFQ  324 (351)
Q Consensus       282 ~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~~~~~  324 (351)
                      .......+..++ +.+.+||.+||..||++||++.|+++|||.
T Consensus       242 ~~~~~~~~~~~~-~~~~~li~~~l~~dp~~Rps~~~ll~h~~~  283 (289)
T 1x8b_A          242 QGRLPRIPQVLS-QEFTELLKVMIHPDPERRPSAMALVKHSVL  283 (289)
T ss_dssp             TTCCCCCSSCCC-HHHHHHHHHHTCSSGGGSCCHHHHHTCTTC
T ss_pred             cCCCCCCCcccC-HHHHHHHHHHhCCCcccCCCHHHHhhChHh
Confidence            011122233344 789999999999999999999999999863

>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A*

Probab=100.00  E-value=2.8e-43  Score=324.50  Aligned_cols=251  Identities=16%  Similarity=0.096  Sum_probs=182.7

Q ss_pred             eeEEEEEEeeccCceEEEEEEecCCCCceEEEEecCCCCChHHHHHHHHHh------hhccccccccccce-------ee
Q 018699           48 KKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFPWEFYMYRQLDQ------RISGRERSSFGFAH-------RI  114 (351)
Q Consensus        48 ~~Y~i~~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~~~e~~~~~~~~~------~~~~~~~~~~~~~~-------~~  114 (351)
                      ..|++.+.||+|+||+||+|. +..+|+.||||++.............+.+      .+.. .|++++...       ++
T Consensus        62 ~~y~~~~~lG~G~~g~V~~~~-~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~~~~l~~-~hp~iv~~~~~~~~p~d~  139 (371)
T 3q60_A           62 RKLKLVEPLRVGDRSVVFLVR-DVERLEDFALKVFTMGAENSRSELERLHEATFAAARLLG-ESPEEARDRRRLLLPSDA  139 (371)
T ss_dssp             EEEEEEEEEEECSSEEEEEEE-ETTTTEEEEEEEEECCSTTHHHHHHHHHHHHHHHHHHHC-----------CBCCCCEE
T ss_pred             eeeeeeeeccCCCCEEEEEEE-ECCCCceeEEEEEEecccccccHHHHHHHHHHHHHHhcc-cChhhhhhceeEEeeehh
Confidence            469999999999999999999 56788999999998765432222222222      2222 466644321       22


Q ss_pred             eccc-----------------CeeEEEEEecCCCCHHHHHHHHHhhCCChhHHHH------HHHHHHHHHHHHHHHHCCc
Q 018699          115 HLYS-----------------DYSILVCDYLSQGTLQDAINSYVVIGKSMEEVLC------IYYTIEMLCILESLHDVGI  171 (351)
Q Consensus       115 ~~~~-----------------~~~~lv~e~~~~~sL~~~l~~~~~~~~~l~~~~~------~~i~~qi~~~l~~LH~~~i  171 (351)
                      ....                 ...|+||||++ ++|.+++....   ..+++...      ..++.||+.||+|||++||
T Consensus       140 ~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~---~~~~~~~~~~~~vk~~i~~qi~~aL~~LH~~~i  215 (371)
T 3q60_A          140 VAVQSQPPFAQLSPGQDDYAVANYLLLMPAAS-VDLELLFSTLD---FVYVFRGDEGILALHILTAQLIRLAANLQSKGL  215 (371)
T ss_dssp             EEETTSCSSSBCSCC---CCEEEEEEEECCCS-EEHHHHHHHHH---HSCCCCHHHHHHHHHHHHHHHHHHHHHHHHTTE
T ss_pred             eecCCCCCeeeccCCcccceeeeEEEEecCCC-CCHHHHHHHhc---cccchhhhhhhhhHHHHHHHHHHHHHHHHHCCC
Confidence            2111                 44799999997 89999998752   34455555      6777999999999999999


Q ss_pred             eecCCCCCcEEEeecCCcceeeccCCCCCcccCCeEEeecCCccccccCCCCccccccccCCCcccceeccC--CCCCcc
Q 018699          172 IHGDFKPDNLLIRYARDELTVLDHDRSGPWQDQGLCLVDWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQEK--KPWKFQ  249 (351)
Q Consensus       172 ~H~dl~p~Nill~~~~~~~~~~~~~~~~~~~~~~~~l~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~--~~~~~~  249 (351)
                      +||||||+||+++                 .++.+||+|||++....     .......+|+.|+|||++.+  ..++.+
T Consensus       216 vHrDikp~NIll~-----------------~~~~~kL~DFG~a~~~~-----~~~~~~~~t~~y~aPE~~~~~~~~~~~~  273 (371)
T 3q60_A          216 VHGHFTPDNLFIM-----------------PDGRLMLGDVSALWKVG-----TRGPASSVPVTYAPREFLNASTATFTHA  273 (371)
T ss_dssp             EETTCSGGGEEEC-----------------TTSCEEECCGGGEEETT-----CEEEGGGSCGGGCCHHHHTCSEEECCHH
T ss_pred             ccCcCCHHHEEEC-----------------CCCCEEEEecceeeecC-----CCccCccCCcCCcChhhccCCCCCcCcc
Confidence            9999999999999                 77889999999987532     12224556799999999987  678999


Q ss_pred             chHhHHHHHHHHHHhCccccccccCCCCCceee-------ecCcchh--hhhHHHHHHHHHHHHhcCCCCCChHHHHHHH
Q 018699          250 VDTYGLCAIVHMMLHNSYMEIEKKASPDGGLVY-------LPKLSFK--RYWKVELWKSLFTNLLNMSSGNDKEVLQNLQ  320 (351)
Q Consensus       250 ~DiwslG~il~~l~~g~~p~~~~~~~~~~~~~~-------~~~~~~~--~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~  320 (351)
                      +|||||||++|+|++|..||..........+..       ......+  ...+ +.+.+||.+||++||++||++.++++
T Consensus       274 ~DiwSlG~il~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~li~~~L~~dP~~Rpt~~e~l~  352 (371)
T 3q60_A          274 LNAWQLGLSIYRVWCLFLPFGLVTPGIKGSWKRPSLRVPGTDSLAFGSCTPLP-DFVKTLIGRFLNFDRRRRLLPLEAME  352 (371)
T ss_dssp             HHHHHHHHHHHHHHHSSCSTTBCCTTCTTCCCBCCTTSCCCCSCCCTTSSCCC-HHHHHHHHHHTCSSTTTCCCHHHHTT
T ss_pred             ccHHHHHHHHHHHHhCCCCCCCcCcccccchhhhhhhhccccccchhhccCCC-HHHHHHHHHHcCCChhhCCCHHHHhc
Confidence            999999999999999999998764432211110       1111111  2334 88999999999999999999999999


Q ss_pred             HHHHHHH
Q 018699          321 KSFQDYL  327 (351)
Q Consensus       321 ~~~~~~~  327 (351)
                      |||..-.
T Consensus       353 hp~f~~~  359 (371)
T 3q60_A          353 TPEFLQL  359 (371)
T ss_dssp             SHHHHHH
T ss_pred             CHHHHHH
Confidence            9875543

>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A

Probab=100.00  E-value=1.3e-43  Score=317.80  Aligned_cols=255  Identities=21%  Similarity=0.228  Sum_probs=198.9

Q ss_pred             CeeEEEEEEeeccCceEEEEEEecCCCCceEEEEecCCCCChHHHHHHHHHhhhccccccccccceeeecccCeeEEEEE
Q 018699           47 GKKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFPWEFYMYRQLDQRISGRERSSFGFAHRIHLYSDYSILVCD  126 (351)
Q Consensus        47 ~~~Y~i~~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e  126 (351)
                      .++|++.+.||+|+||+||+|+ +..+|+.||+|++..........+......+....|++++.+..++...+..++|||
T Consensus         8 ~~~y~~~~~lg~G~~g~V~~~~-~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e   86 (304)
T 2jam_A            8 RKTFIFMEVLGSGAFSEVFLVK-QRLTGKLFALKCIKKSPAFRDSSLENEIAVLKKIKHENIVTLEDIYESTTHYYLVMQ   86 (304)
T ss_dssp             HHHEEEEEEEEECSSEEEEEEE-ETTTCCEEEEEEEECC------HHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEC
T ss_pred             hccceeeeeccCCCCceEEEEE-ECCCCCEEEEEEEecccccchHHHHHHHHHHHhCCCCCeeehhhhcccCCEEEEEEE
Confidence            4789999999999999999999 567889999999876533222222222333444568888888888888899999999


Q ss_pred             ecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeeccCCCCCcccCCe
Q 018699          127 YLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSGPWQDQGL  206 (351)
Q Consensus       127 ~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~~~~~~~~~~~  206 (351)
                      |+++++|.+++...    ..+++..++.++.|++.|+.|||++||+|+||+|+||++...+              .++.+
T Consensus        87 ~~~~~~L~~~l~~~----~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dikp~NIl~~~~~--------------~~~~~  148 (304)
T 2jam_A           87 LVSGGELFDRILER----GVYTEKDASLVIQQVLSAVKYLHENGIVHRDLKPENLLYLTPE--------------ENSKI  148 (304)
T ss_dssp             CCCSCBHHHHHHHH----SCCCHHHHHHHHHHHHHHHHHHHHTTCCCCSCCGGGCEESSSS--------------TTCCE
T ss_pred             cCCCccHHHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEEecCC--------------CCCCE
Confidence            99999999998773    6789999999999999999999999999999999999994221              56779


Q ss_pred             EEeecCCccccccCCCCccccccccCCCcccceeccCCCCCccchHhHHHHHHHHHHhCccccccccCCCCCcee----e
Q 018699          207 CLVDWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQEKKPWKFQVDTYGLCAIVHMMLHNSYMEIEKKASPDGGLV----Y  282 (351)
Q Consensus       207 ~l~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~p~~~~~~~~~~~~~----~  282 (351)
                      +|+|||++....    ........|++.|+|||++.+..++.++|||||||++|+|++|..||............    .
T Consensus       149 kl~Dfg~~~~~~----~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~  224 (304)
T 2jam_A          149 MITDFGLSKMEQ----NGIMSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVITYILLCGYPPFYEETESKLFEKIKEGYY  224 (304)
T ss_dssp             EBCSCSTTCCCC----CBTTHHHHSCCCBCCTTTBSSCSCCHHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHCCC
T ss_pred             EEccCCcceecC----CCccccccCCCCccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHcCCC
Confidence            999999885422    22234456899999999999999999999999999999999999999654321000000    0


Q ss_pred             ecCcchhhhhHHHHHHHHHHHHhcCCCCCChHHHHHHHHHHHH
Q 018699          283 LPKLSFKRYWKVELWKSLFTNLLNMSSGNDKEVLQNLQKSFQD  325 (351)
Q Consensus       283 ~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~~~~~~  325 (351)
                      ....+.....+ +.+.+||.+||..||++||++.|+++|+|..
T Consensus       225 ~~~~~~~~~~~-~~~~~li~~~l~~dp~~Rps~~~~l~h~~~~  266 (304)
T 2jam_A          225 EFESPFWDDIS-ESAKDFICHLLEKDPNERYTCEKALSHPWID  266 (304)
T ss_dssp             CCCTTTTTTSC-HHHHHHHHHHHCSSTTTSCCHHHHHTSHHHH
T ss_pred             CCCccccccCC-HHHHHHHHHHcCCChhHCcCHHHHhcCcccc
Confidence            11112222334 7899999999999999999999999998754

>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*

Probab=100.00  E-value=7.3e-44  Score=341.91  Aligned_cols=256  Identities=18%  Similarity=0.207  Sum_probs=204.8

Q ss_pred             EcCeeEEEEEEeeccCceEEEEEEecCCCCceEEEEecCCCCC---hHHHHHHHHHhhhccccccccccceeeecccCee
Q 018699           45 IGGKKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFP---WEFYMYRQLDQRISGRERSSFGFAHRIHLYSDYS  121 (351)
Q Consensus        45 i~~~~Y~i~~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~~---~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  121 (351)
                      +..++|++.+.||+|+||.||+|+ +..+|+.||+|++.+...   ............+....|++++.....+...+.+
T Consensus       181 ~~~~~f~~~~~LG~G~fG~Vy~a~-~~~tg~~vAvK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l  259 (576)
T 2acx_A          181 VTKNTFRQYRVLGKGGFGEVCACQ-VRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDAL  259 (576)
T ss_dssp             CCGGGEEEEEEEEEETTEEEEEEE-ETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEE
T ss_pred             ccccceEEEEEEeeCCCEEEEEEE-ECCCCCEEEEEEEEhHhhhhhHHHHHHHHHHHHHHHcCCCCEeeEEEEEeeCCEE
Confidence            456789999999999999999999 567899999999864211   0111111222233445688888888888888999


Q ss_pred             EEEEEecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeeccCCCCCc
Q 018699          122 ILVCDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSGPW  201 (351)
Q Consensus       122 ~lv~e~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~~~~~~  201 (351)
                      |+||||++||+|.+++....  ...+++..++.++.||+.||.|||++||+||||||+||+++                 
T Consensus       260 ~lVmEy~~gg~L~~~l~~~~--~~~l~e~~~~~i~~qIl~aL~yLH~~gIvHrDLKPeNILld-----------------  320 (576)
T 2acx_A          260 CLVLTLMNGGDLKFHIYHMG--QAGFPEARAVFYAAEICCGLEDLHRERIVYRDLKPENILLD-----------------  320 (576)
T ss_dssp             EEEECCCCSCBHHHHHHSSS--SCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEC-----------------
T ss_pred             EEEEEcCCCCcHHHHHHhcC--CCCCCHHHHHHHHHHHHHHHHHHHHCCEeccCCchheEEEe-----------------
Confidence            99999999999999987632  23489999999999999999999999999999999999999                 


Q ss_pred             ccCCeEEeecCCccccccCCCCccccccccCCCcccceeccCCCCCccchHhHHHHHHHHHHhCccccccccCCCCC---
Q 018699          202 QDQGLCLVDWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQEKKPWKFQVDTYGLCAIVHMMLHNSYMEIEKKASPDG---  278 (351)
Q Consensus       202 ~~~~~~l~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~p~~~~~~~~~~---  278 (351)
                      .++.++|+|||++....   ........+||+.|+|||++.+..++.++|||||||++|+|++|..||.........   
T Consensus       321 ~~g~vKL~DFGla~~~~---~~~~~~~~~GT~~Y~APEvl~~~~~~~~~DiwSLGvilyeLltG~~PF~~~~~~~~~~~i  397 (576)
T 2acx_A          321 DHGHIRISDLGLAVHVP---EGQTIKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEV  397 (576)
T ss_dssp             TTSCEEECCCTTCEECC---TTCCEECCCSCGGGCCHHHHTTCEESSHHHHHHHHHHHHHHHHSSCSSSCSSSCCCHHHH
T ss_pred             CCCCeEEEecccceecc---cCccccccCCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCcccccchhHHHH
Confidence            77889999999996532   233345568999999999999988999999999999999999999999865432110   


Q ss_pred             -ceeeecCcchhhhhHHHHHHHHHHHHhcCCCCCCh-----HHHHHHHHHHH
Q 018699          279 -GLVYLPKLSFKRYWKVELWKSLFTNLLNMSSGNDK-----EVLQNLQKSFQ  324 (351)
Q Consensus       279 -~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~-----s~~e~l~~~~~  324 (351)
                       .........++..++ +.+++||.+||.+||.+||     ++.|+++|||.
T Consensus       398 ~~~i~~~~~~~p~~~s-~~~~dLI~~lL~~dP~~R~g~~~~sa~eil~HpfF  448 (576)
T 2acx_A          398 ERLVKEVPEEYSERFS-PQARSLCSQLLCKDPAERLGCRGGSAREVKEHPLF  448 (576)
T ss_dssp             HHHHHHCCCCCCTTSC-HHHHHHHHHHTCSSGGGSTTCSSSHHHHHHTSGGG
T ss_pred             HHHhhcccccCCccCC-HHHHHHHHHhccCCHHHcCCCCCCCHHHHHhChhh
Confidence             011122334445556 8899999999999999999     89999999874

>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens}

Probab=100.00  E-value=1.4e-44  Score=336.29  Aligned_cols=257  Identities=18%  Similarity=0.233  Sum_probs=198.8

Q ss_pred             EEcCeeEEEEEEeeccCceEEEEEEecCCCCceEEEEecCCCCC---hHHHHHHHHHhhhccccccccccceeeecccCe
Q 018699           44 EIGGKKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFP---WEFYMYRQLDQRISGRERSSFGFAHRIHLYSDY  120 (351)
Q Consensus        44 ~i~~~~Y~i~~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~~---~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  120 (351)
                      .+..++|++.+.||+|+||+||+|+ +..+|+.||||++.+...   .+...+......+....|++++.+...+...+.
T Consensus        57 ~~~~~~f~~~~~lG~G~fG~V~~~~-~~~~~~~vAiK~l~k~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~~~~~  135 (412)
T 2vd5_A           57 RLQRDDFEILKVIGRGAFSEVAVVK-MKQTGQVYAMKIMNKWDMLKRGEVSCFREERDVLVNGDRRWITQLHFAFQDENY  135 (412)
T ss_dssp             SCCGGGEEEEEEEEECSSCEEEEEE-ETTTCCEEEEEEEEHHHHHHHGGGCCHHHHHHHHHHSCTTTBCCEEEEEECSSE
T ss_pred             cCChhhEEEEEEEeeCCCeEEEEEE-ECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhcCCCCeeeEEEEEeeCCE
Confidence            3456799999999999999999999 567899999999864211   011112222233344567888888888888999


Q ss_pred             eEEEEEecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeeccCCCCC
Q 018699          121 SILVCDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSGP  200 (351)
Q Consensus       121 ~~lv~e~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~~~~~  200 (351)
                      +|+||||++||+|.+++...   +..+++..++.++.||+.||.|||++||+||||||+||+++                
T Consensus       136 ~~lVmE~~~gg~L~~~l~~~---~~~l~~~~~~~~~~qi~~aL~~LH~~giiHrDLKp~NILld----------------  196 (412)
T 2vd5_A          136 LYLVMEYYVGGDLLTLLSKF---GERIPAEMARFYLAEIVMAIDSVHRLGYVHRDIKPDNILLD----------------  196 (412)
T ss_dssp             EEEEECCCCSCBHHHHHHHH---SSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEC----------------
T ss_pred             EEEEEcCCCCCcHHHHHHhc---CCCCCHHHHHHHHHHHHHHHHHHHHCCeeecccCHHHeeec----------------
Confidence            99999999999999999875   45799999999999999999999999999999999999999                


Q ss_pred             cccCCeEEeecCCccccccCCCCccccccccCCCcccceecc-------CCCCCccchHhHHHHHHHHHHhCcccccccc
Q 018699          201 WQDQGLCLVDWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQE-------KKPWKFQVDTYGLCAIVHMMLHNSYMEIEKK  273 (351)
Q Consensus       201 ~~~~~~~l~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~-------~~~~~~~~DiwslG~il~~l~~g~~p~~~~~  273 (351)
                       .++.+||+|||++...... ........+||+.|+|||++.       +..++.++|||||||++|+|++|..||...+
T Consensus       197 -~~g~vkL~DFGla~~~~~~-~~~~~~~~~Gt~~Y~APE~l~~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~  274 (412)
T 2vd5_A          197 -RCGHIRLADFGSCLKLRAD-GTVRSLVAVGTPDYLSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQTPFYADS  274 (412)
T ss_dssp             -TTSCEEECCCTTCEECCTT-SCEECSSCCSCGGGCCHHHHHHHHTCTTCSEECTHHHHHHHHHHHHHHHHSSCTTCCSS
T ss_pred             -CCCCEEEeechhheeccCC-CccccceeccccCcCCHHHHhhcccCcCCCCCChHHhhhHHhHHHHHHHhCCCCCCCCC
Confidence             7888999999998654321 111223458999999999986       3568899999999999999999999997654


Q ss_pred             CCCCCceee--e---cCcchhhhhHHHHHHHHHHHHhcCCCCCC---hHHHHHHHHHHH
Q 018699          274 ASPDGGLVY--L---PKLSFKRYWKVELWKSLFTNLLNMSSGND---KEVLQNLQKSFQ  324 (351)
Q Consensus       274 ~~~~~~~~~--~---~~~~~~~~~~~~~~~~li~~~L~~dP~~R---~s~~e~l~~~~~  324 (351)
                      .......+.  .   ..+..+..++ +.+++||.+||. +|.+|   +++.|+++|||.
T Consensus       275 ~~~~~~~i~~~~~~~~~p~~~~~~s-~~~~dli~~lL~-~p~~Rlgr~~~~ei~~Hpff  331 (412)
T 2vd5_A          275 TAETYGKIVHYKEHLSLPLVDEGVP-EEARDFIQRLLC-PPETRLGRGGAGDFRTHPFF  331 (412)
T ss_dssp             HHHHHHHHHTHHHHCCCC----CCC-HHHHHHHHTTSS-CGGGCTTTTTHHHHHTSGGG
T ss_pred             HHHHHHHHHhcccCcCCCccccCCC-HHHHHHHHHHcC-ChhhcCCCCCHHHHhcCCCc
Confidence            321111010  0   0111122344 889999999999 99998   589999999874

>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}

Probab=100.00  E-value=1.3e-43  Score=322.06  Aligned_cols=245  Identities=19%  Similarity=0.216  Sum_probs=197.3

Q ss_pred             eeEEEEEEeeccCceEEEEEEecCCCCceEEEEecCCCCChHH--------HHHHHHHhhhccccccccccceeeecccC
Q 018699           48 KKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFPWEF--------YMYRQLDQRISGRERSSFGFAHRIHLYSD  119 (351)
Q Consensus        48 ~~Y~i~~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~~~e~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  119 (351)
                      ++|++.+.||+|+||+||+|+ +..+++.||||++......+.        ..+......+....|++++.+..++...+
T Consensus        24 ~~y~~~~~lG~G~~g~Vy~a~-~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~  102 (335)
T 3dls_A           24 QKYSTMSPLGSGAFGFVWTAV-DKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSRVEHANIIKVLDIFENQG  102 (335)
T ss_dssp             HHEEEEEECSSSSSCSEEEEE-ETTTTEEEEEEEEESTTSCTTSEEEETTTEEEEHHHHHHTTCCCTTBCCEEEEEECSS
T ss_pred             cceEEEeEEEecCCEEEEEEE-ECCCCcEEEEEEEehhhcccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEeeCC
Confidence            689999999999999999999 577899999999875431100        00011112223346788999899888899


Q ss_pred             eeEEEEEecCCC-CHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeeccCCC
Q 018699          120 YSILVCDYLSQG-TLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRS  198 (351)
Q Consensus       120 ~~~lv~e~~~~~-sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~~~  198 (351)
                      ..++||||+.+| +|.+++..    +..+++..++.++.||+.||.|||++||+||||||+||+++              
T Consensus       103 ~~~lv~e~~~~g~~l~~~~~~----~~~l~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~--------------  164 (335)
T 3dls_A          103 FFQLVMEKHGSGLDLFAFIDR----HPRLDEPLASYIFRQLVSAVGYLRLKDIIHRDIKDENIVIA--------------  164 (335)
T ss_dssp             EEEEEEECCTTSCBHHHHHHT----CCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEC--------------
T ss_pred             EEEEEEEeCCCCccHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHhCCeEEeccCHHHEEEc--------------
Confidence            999999998666 99999987    56899999999999999999999999999999999999999              


Q ss_pred             CCcccCCeEEeecCCccccccCCCCccccccccCCCcccceeccCCCC-CccchHhHHHHHHHHHHhCccccccccCCCC
Q 018699          199 GPWQDQGLCLVDWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQEKKPW-KFQVDTYGLCAIVHMMLHNSYMEIEKKASPD  277 (351)
Q Consensus       199 ~~~~~~~~~l~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~-~~~~DiwslG~il~~l~~g~~p~~~~~~~~~  277 (351)
                         .++.++|+|||++....   .........||+.|+|||++.+..+ +.++|||||||++|+|++|..||........
T Consensus       165 ---~~~~~kL~Dfg~a~~~~---~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~  238 (335)
T 3dls_A          165 ---EDFTIKLIDFGSAAYLE---RGKLFYTFCGTIEYCAPEVLMGNPYRGPELEMWSLGVTLYTLVFEENPFCELEETVE  238 (335)
T ss_dssp             ---TTSCEEECCCTTCEECC---TTCCBCEECSCGGGCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSCSSGGGGTT
T ss_pred             ---CCCcEEEeecccceECC---CCCceeccCCCccccChhhhcCCCCCCCcccchhHHHHHHHHHhCCCchhhHHHHHh
Confidence               77889999999986533   2233445678999999999988776 7899999999999999999999976544322


Q ss_pred             CceeeecCcchhhhhHHHHHHHHHHHHhcCCCCCChHHHHHHHHHHH
Q 018699          278 GGLVYLPKLSFKRYWKVELWKSLFTNLLNMSSGNDKEVLQNLQKSFQ  324 (351)
Q Consensus       278 ~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~~~~~  324 (351)
                      ...  ..    +..++ +.+.+||.+||++||++||++.++++|||.
T Consensus       239 ~~~--~~----~~~~~-~~l~~li~~~L~~dP~~Rps~~ell~hp~~  278 (335)
T 3dls_A          239 AAI--HP----PYLVS-KELMSLVSGLLQPVPERRTTLEKLVTDPWV  278 (335)
T ss_dssp             TCC--CC----SSCCC-HHHHHHHHHHTCSSGGGSCCHHHHHHCTTT
T ss_pred             hcc--CC----CcccC-HHHHHHHHHHccCChhhCcCHHHHhcCccc
Confidence            211  11    22233 789999999999999999999999999873

>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A*

Probab=100.00  E-value=1.5e-43  Score=315.90  Aligned_cols=255  Identities=19%  Similarity=0.202  Sum_probs=203.0

Q ss_pred             cCeeEEEEEEeeccCceEEEEEEecCCCCceEEEEecCCCCCh---HHHHHHHHHhhhccccccccccceeeecccCeeE
Q 018699           46 GGKKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFPW---EFYMYRQLDQRISGRERSSFGFAHRIHLYSDYSI  122 (351)
Q Consensus        46 ~~~~Y~i~~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~~~---e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  122 (351)
                      ..++|++.+.||+|+||+||+|. +..+++.||+|++......   ..+.+...........|++++.+..++...+..+
T Consensus        13 ~~~~y~~~~~lg~G~~g~Vy~~~-~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~   91 (294)
T 2rku_A           13 SRRRYVRGRFLGKGGFAKCFEIS-DADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVF   91 (294)
T ss_dssp             TTEEEEEEEEEEEETTEEEEEEE-ETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEE
T ss_pred             cccceEEEEEEeecCCEEEEEEE-ECCCCceEEEEEechhhccCHHHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCEEE
Confidence            35899999999999999999999 5778899999998654321   1222222223344557889999888888889999


Q ss_pred             EEEEecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeeccCCCCCcc
Q 018699          123 LVCDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSGPWQ  202 (351)
Q Consensus       123 lv~e~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~~~~~~~  202 (351)
                      +||||+++++|.+++..    +..+++..++.++.|++.|+.|||++||+|+||+|+||+++                 .
T Consensus        92 lv~e~~~~~~L~~~~~~----~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dl~p~Nil~~-----------------~  150 (294)
T 2rku_A           92 VVLELCRRRSLLELHKR----RKALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLN-----------------E  150 (294)
T ss_dssp             EEEECCTTCBHHHHHHH----HCSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEC-----------------T
T ss_pred             EEEecCCCCCHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCChHhEEEc-----------------C
Confidence            99999999999999877    36799999999999999999999999999999999999999                 7


Q ss_pred             cCCeEEeecCCccccccCCCCccccccccCCCcccceeccCCCCCccchHhHHHHHHHHHHhCccccccccCCCCCceee
Q 018699          203 DQGLCLVDWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQEKKPWKFQVDTYGLCAIVHMMLHNSYMEIEKKASPDGGLVY  282 (351)
Q Consensus       203 ~~~~~l~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~p~~~~~~~~~~~~~~  282 (351)
                      ++.++|+|||++......  ........|++.|+|||++.+..++.++||||||+++|+|++|..||.............
T Consensus       151 ~~~~kl~dfg~~~~~~~~--~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~  228 (294)
T 2rku_A          151 DLEVKIGDFGLATKVEYD--GERKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIK  228 (294)
T ss_dssp             TCCEEECCCTTCEECCST--TCCBCCCCSCCSSCCHHHHTTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHH
T ss_pred             CCCEEEEeccCceecccC--ccccccccCCCCcCCcchhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHh
Confidence            788999999998654321  222344578999999999998888999999999999999999999996543211000011


Q ss_pred             ecCcchhhhhHHHHHHHHHHHHhcCCCCCChHHHHHHHHHHHH
Q 018699          283 LPKLSFKRYWKVELWKSLFTNLLNMSSGNDKEVLQNLQKSFQD  325 (351)
Q Consensus       283 ~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~~~~~~  325 (351)
                      ......+..++ +.+.++|.+||..||++||++.|+++|+|..
T Consensus       229 ~~~~~~~~~~~-~~~~~li~~~l~~~p~~Rps~~~ll~~~~~~  270 (294)
T 2rku_A          229 KNEYSIPKHIN-PVAASLIQKMLQTDPTARPTINELLNDEFFT  270 (294)
T ss_dssp             TTCCCCCTTSC-HHHHHHHHHHTCSSGGGSCCGGGGGGSHHHH
T ss_pred             hccCCCccccC-HHHHHHHHHHcccChhhCcCHHHHhhChhee
Confidence            11222333444 7899999999999999999999999998743

>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*

Probab=100.00  E-value=2e-43  Score=336.68  Aligned_cols=256  Identities=18%  Similarity=0.207  Sum_probs=198.9

Q ss_pred             CeeEEEEEEeeccCceEEEEEEecCCCCceEEEEecCCC---CChHHHHHHHHHhhhccccccccccceeeecccCeeEE
Q 018699           47 GKKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPA---FPWEFYMYRQLDQRISGRERSSFGFAHRIHLYSDYSIL  123 (351)
Q Consensus        47 ~~~Y~i~~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~---~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  123 (351)
                      .++|++.+.||+|+||+||+|+ +..+++.||||++.+.   ........++ ...+....|++++.+..++...+..|+
T Consensus        21 ~~~y~~~~~lG~G~~g~V~~~~-~~~~~~~vavK~~~~~~~~~~~~~~~~~E-~~~l~~l~hpniv~~~~~~~~~~~~~l   98 (486)
T 3mwu_A           21 AERYNIVCMLGKGSFGEVLKCK-DRITQQEYAVKVINKASAKNKDTSTILRE-VELLKKLDHPNIMKLFEILEDSSSFYI   98 (486)
T ss_dssp             HHHEEEEEEEECCSSSEEEEEE-ETTTCCEEEEEEEEHHHHBCSCHHHHHHH-HHHHHHCCCTTBCCEEEEEECSSEEEE
T ss_pred             hcceEEeEEEeecCCEEEEEEE-ECCCCCEEEEEEEecccccchHHHHHHHH-HHHHHhCCCCCcCeEEEEEEcCCEEEE
Confidence            4789999999999999999999 5778999999997532   1111222222 223344578899999998888999999


Q ss_pred             EEEecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeeccCCCCCccc
Q 018699          124 VCDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSGPWQD  203 (351)
Q Consensus       124 v~e~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~~~~~~~~  203 (351)
                      ||||+.+++|.+.+...    ..+++..++.++.||+.||.|||++||+||||||+||+++..+              .+
T Consensus        99 v~e~~~~~~L~~~~~~~----~~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dlkp~Nil~~~~~--------------~~  160 (486)
T 3mwu_A           99 VGELYTGGELFDEIIKR----KRFSEHDAARIIKQVFSGITYMHKHNIVHRDLKPENILLESKE--------------KD  160 (486)
T ss_dssp             EECCCCSCBHHHHHHHH----SSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEESSSS--------------TT
T ss_pred             EEEcCCCCcHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCchHHEEEecCC--------------CC
Confidence            99999999999998773    6799999999999999999999999999999999999997432              45


Q ss_pred             CCeEEeecCCccccccCCCCccccccccCCCcccceeccCCCCCccchHhHHHHHHHHHHhCccccccccCCCCCcee--
Q 018699          204 QGLCLVDWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQEKKPWKFQVDTYGLCAIVHMMLHNSYMEIEKKASPDGGLV--  281 (351)
Q Consensus       204 ~~~~l~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~p~~~~~~~~~~~~~--  281 (351)
                      +.++|+|||++....   .........||+.|+|||++.+ .++.++|||||||++|+|++|.+||............  
T Consensus       161 ~~~kl~Dfg~a~~~~---~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~  236 (486)
T 3mwu_A          161 CDIKIIDFGLSTCFQ---QNTKMKDRIGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRVET  236 (486)
T ss_dssp             CCEEECSCSCTTTBC---CC----CCTTGGGGCCGGGGGS-CCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHH
T ss_pred             CCEEEEECCcCeECC---CCCccCCCcCCCCCCCHHHhCC-CCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHh
Confidence            679999999986432   2333455679999999999876 4899999999999999999999999754332100000  


Q ss_pred             --eecCcchhhhhHHHHHHHHHHHHhcCCCCCChHHHHHHHHHHHHHH
Q 018699          282 --YLPKLSFKRYWKVELWKSLFTNLLNMSSGNDKEVLQNLQKSFQDYL  327 (351)
Q Consensus       282 --~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~~~~~~~~  327 (351)
                        .....+....++ +.+++||.+||.+||.+|||+.|+|.|||..-.
T Consensus       237 ~~~~~~~~~~~~~s-~~~~~li~~~L~~dp~~R~t~~~~l~hp~~~~~  283 (486)
T 3mwu_A          237 GKYAFDLPQWRTIS-DDAKDLIRKMLTFHPSLRITATQCLEHPWIQKY  283 (486)
T ss_dssp             TCCCSCSGGGGGSC-HHHHHHHHHHTCSSTTTSCCHHHHHHCHHHHHT
T ss_pred             CCCCCCCcccCCCC-HHHHHHHHHHcCCChhhCcCHHHHhcCHhhccC
Confidence              011111122334 789999999999999999999999999986544

>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A*

Probab=100.00  E-value=2.2e-43  Score=319.95  Aligned_cols=260  Identities=15%  Similarity=0.150  Sum_probs=191.0

Q ss_pred             EcCeeEEEEEEeeccCceEEEEEEecCCCCceEEEEecCCCCChHH--HHHHHHHhhhccccccccccceeeecccCeeE
Q 018699           45 IGGKKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFPWEF--YMYRQLDQRISGRERSSFGFAHRIHLYSDYSI  122 (351)
Q Consensus        45 i~~~~Y~i~~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~~~e~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  122 (351)
                      ...++|++.+.||+|+||+||+|+ +..+++.||||++......+.  .........+....|++++.+..+...++..+
T Consensus        31 ~~~~~y~~~~~lg~G~~g~V~~~~-~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~  109 (329)
T 3gbz_A           31 TSIDRYRRITKLGEGTYGEVYKAI-DTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKELQHRNIIELKSVIHHNHRLH  109 (329)
T ss_dssp             -CGGGEEEEEEEEECSSSEEEEEE-ETTTTEEEEEEECCCCC--------CHHHHHHGGGCCCTTBCCEEEEEEETTEEE
T ss_pred             cchhhEEEEEEEEecCCeEEEEEE-ECCCCceEEEEEEcccccccccchhHHHHHHHHHHcCCCCcceEEEEEecCCEEE
Confidence            345799999999999999999999 577899999999875533221  11112223344557889999888888899999


Q ss_pred             EEEEecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeeccCCCCCcc
Q 018699          123 LVCDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSGPWQ  202 (351)
Q Consensus       123 lv~e~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~~~~~~~  202 (351)
                      +||||+. ++|.+++..    +..+++..++.++.||+.||.|||++||+|+||||+||+++.++..            .
T Consensus       110 lv~e~~~-~~L~~~~~~----~~~~~~~~~~~i~~ql~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~------------~  172 (329)
T 3gbz_A          110 LIFEYAE-NDLKKYMDK----NPDVSMRVIKSFLYQLINGVNFCHSRRCLHRDLKPQNLLLSVSDAS------------E  172 (329)
T ss_dssp             EEEECCS-EEHHHHHHH----CTTCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEEC-----------------
T ss_pred             EEEecCC-CCHHHHHhh----cCCCCHHHHHHHHHHHHHHHHHHHhCCEECCCCCHHHEEEecCCCC------------c
Confidence            9999995 599999987    5679999999999999999999999999999999999999743321            4


Q ss_pred             cCCeEEeecCCccccccCCCCccccccccCCCcccceeccCC-CCCccchHhHHHHHHHHHHhCccccccccCCCC----
Q 018699          203 DQGLCLVDWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQEKK-PWKFQVDTYGLCAIVHMMLHNSYMEIEKKASPD----  277 (351)
Q Consensus       203 ~~~~~l~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~-~~~~~~DiwslG~il~~l~~g~~p~~~~~~~~~----  277 (351)
                      .+.++|+|||++.....  .........+|+.|+|||++.+. .++.++|||||||++|+|++|..||........    
T Consensus       173 ~~~~kl~Dfg~a~~~~~--~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~  250 (329)
T 3gbz_A          173 TPVLKIGDFGLARAFGI--PIRQFTHEIITLWYRPPEILLGSRHYSTSVDIWSIACIWAEMLMKTPLFPGDSEIDQLFKI  250 (329)
T ss_dssp             CCEEEECCTTHHHHHC-------------CCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHH
T ss_pred             cceEEECcCCCccccCC--cccccCCCcCCccccCHHHhcCCCCCCcHHHHHHHHHHHHHHHHCCCCcCCCCHHHHHHHH
Confidence            55699999999865331  12233455689999999999774 579999999999999999999999864322100    


Q ss_pred             ---------C-------------ceee----ecCcchhhhhHHHHHHHHHHHHhcCCCCCChHHHHHHHHHHHH
Q 018699          278 ---------G-------------GLVY----LPKLSFKRYWKVELWKSLFTNLLNMSSGNDKEVLQNLQKSFQD  325 (351)
Q Consensus       278 ---------~-------------~~~~----~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~~~~~~  325 (351)
                               .             .+..    .....++...+ +.+.+||.+||++||.+|||+.|+|+|||..
T Consensus       251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~li~~~L~~dP~~R~t~~e~l~hp~f~  323 (329)
T 3gbz_A          251 FEVLGLPDDTTWPGVTALPDWKQSFPKFRGKTLKRVLGALLD-DEGLDLLTAMLEMDPVKRISAKNALEHPYFS  323 (329)
T ss_dssp             HHHHCCCCTTTSTTGGGSTTCCTTCCCCCCCCHHHHHGGGSC-HHHHHHHHHHTCSSGGGSCCHHHHHTSGGGS
T ss_pred             HHHhCCCchhhhhhhhhhhhhhhhhhhhccccHhhhcccccC-HHHHHHHHHHccCChhhCCCHHHHhCCcccC
Confidence                     0             0000    00001111133 7889999999999999999999999998743

>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A*

Probab=100.00  E-value=2.8e-43  Score=319.56  Aligned_cols=267  Identities=17%  Similarity=0.195  Sum_probs=199.1

Q ss_pred             CeeEEEEEEeeccCceEEEEEEecCCCCceEEEEecCCCCChHH--HHHHHHHhhhccccccccccceeeecccCeeEEE
Q 018699           47 GKKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFPWEF--YMYRQLDQRISGRERSSFGFAHRIHLYSDYSILV  124 (351)
Q Consensus        47 ~~~Y~i~~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~~~e~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv  124 (351)
                      .++|++.+.||+|+||+||+|+ +..+|+.||+|++........  ..............|++++.+..++...+..++|
T Consensus        24 ~~~y~~~~~lg~G~~g~V~~~~-~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv  102 (331)
T 4aaa_A           24 MEKYENLGLVGEGSYGMVMKCR-NKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHENLVNLLEVCKKKKRWYLV  102 (331)
T ss_dssp             GGGEEEEEEGGGGTTSSEEEEE-ETTTCCEEEEEEEESCSSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEE
T ss_pred             hhhheeeeEEeecCCEEEEEEE-ECCCCceEEEEEEecCCCchHHHHHHHHHHHHHhhCCCCCEeeEEEEeecCCEEEEE
Confidence            5799999999999999999999 577889999999865543321  1122222334445688999999888889999999


Q ss_pred             EEecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeeccCCCCCcccC
Q 018699          125 CDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSGPWQDQ  204 (351)
Q Consensus       125 ~e~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~~~~~~~~~  204 (351)
                      |||+++++|.++...    ...+++..++.++.|++.|+.|||++||+|+||+|+||+++                 .++
T Consensus       103 ~e~~~~~~l~~~~~~----~~~~~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~Nil~~-----------------~~~  161 (331)
T 4aaa_A          103 FEFVDHTILDDLELF----PNGLDYQVVQKYLFQIINGIGFCHSHNIIHRDIKPENILVS-----------------QSG  161 (331)
T ss_dssp             EECCSEEHHHHHHHS----TTCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEC-----------------TTS
T ss_pred             EecCCcchHHHHHhh----ccCCCHHHHHHHHHHHHHHHHHHHHCCEEccCcChheEEEc-----------------CCC
Confidence            999988888887665    46799999999999999999999999999999999999999                 778


Q ss_pred             CeEEeecCCccccccCCCCccccccccCCCcccceeccCC-CCCccchHhHHHHHHHHHHhCccccccccCCCC------
Q 018699          205 GLCLVDWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQEKK-PWKFQVDTYGLCAIVHMMLHNSYMEIEKKASPD------  277 (351)
Q Consensus       205 ~~~l~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~-~~~~~~DiwslG~il~~l~~g~~p~~~~~~~~~------  277 (351)
                      .++|+|||++.....  .........|++.|+|||++.+. .++.++|||||||++|+|++|..||........      
T Consensus       162 ~~kl~Dfg~~~~~~~--~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~  239 (331)
T 4aaa_A          162 VVKLCDFGFARTLAA--PGEVYDDEVATRWYRAPELLVGDVKYGKAVDVWAIGCLVTEMFMGEPLFPGDSDIDQLYHIMM  239 (331)
T ss_dssp             CEEECCCTTC--------------CCCCCTTCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHH
T ss_pred             cEEEEeCCCceeecC--CccccCCCcCCccccCcccccCCCCcchHHHHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHH
Confidence            899999999864331  12233455789999999999775 688999999999999999999999865432100      


Q ss_pred             --------------------C-ce-eeecCcchh---hhhHHHHHHHHHHHHhcCCCCCChHHHHHHHHHHHHHHhhChH
Q 018699          278 --------------------G-GL-VYLPKLSFK---RYWKVELWKSLFTNLLNMSSGNDKEVLQNLQKSFQDYLCSNPQ  332 (351)
Q Consensus       278 --------------------~-~~-~~~~~~~~~---~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~~~~~~~~~~~~~  332 (351)
                                          + .. .........   ...+ +.+.+||.+||..||.+||++.|+|+|||.........
T Consensus       240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~l~~li~~~L~~dP~~Rpt~~ell~hp~f~~~~~~~~  318 (331)
T 4aaa_A          240 CLGNLIPRHQELFNKNPVFAGVRLPEIKEREPLERRYPKLS-EVVIDLAKKCLHIDPDKRPFCAELLHHDFFQMDGFAER  318 (331)
T ss_dssp             HHCSCCHHHHHHHHHCGGGTTCCCCCCSSCCCHHHHSTTSC-HHHHHHHHHHTCSSGGGSCCGGGGGGSHHHHGGGHHHH
T ss_pred             HhCCCChhhhhHhhhccccccccCccccccchhhhcccchh-HHHHHHHHHHhccCcccCCCHHHHhcCchhccCChhhh
Confidence                                0 00 000000111   1123 78999999999999999999999999997655443343


Q ss_pred             HHHHHH
Q 018699          333 LLKNLK  338 (351)
Q Consensus       333 ~~~~~~  338 (351)
                      +...++
T Consensus       319 ~~~~~~  324 (331)
T 4aaa_A          319 FSQELQ  324 (331)
T ss_dssp             HHHHHH
T ss_pred             hhHHHh
Confidence            444333

>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A

Probab=100.00  E-value=9.1e-44  Score=320.46  Aligned_cols=259  Identities=20%  Similarity=0.228  Sum_probs=194.1

Q ss_pred             CeeEEEE-EEeeccCceEEEEEEecCCCCceEEEEecCCCCCh-HHHHHHHHHhhhccccccccccceeeecccCeeEEE
Q 018699           47 GKKYQIK-GCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFPW-EFYMYRQLDQRISGRERSSFGFAHRIHLYSDYSILV  124 (351)
Q Consensus        47 ~~~Y~i~-~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~~~-e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv  124 (351)
                      .++|++. +.||+|+||+||+|. +..+++.||||++...... .....+++........|++++.+..++...+..|+|
T Consensus        11 ~~~y~i~~~~lg~G~~g~V~~~~-~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~~~~h~~i~~~~~~~~~~~~~~lv   89 (316)
T 2ac3_A           11 EDVYQLQEDVLGEGAHARVQTCI-NLITSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQGHRNVLELIEFFEEEDRFYLV   89 (316)
T ss_dssp             TTSCEECCCCCCCCSSEEEEEEE-CSSSCCEEEEEEEECCSSCCHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEE
T ss_pred             ceeEEecCceecCCceEEEEEEE-EcCCCcEEEEEEEeeCcchhHHHHHHHHHHHHHhcCCCCeeeEEEEEeeCCEEEEE
Confidence            4689995 789999999999999 5778899999998765332 223333333322334688999999988888999999


Q ss_pred             EEecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeeccCCCCCcccC
Q 018699          125 CDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSGPWQDQ  204 (351)
Q Consensus       125 ~e~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~~~~~~~~~  204 (351)
                      |||+++++|.+++...    ..+++..++.++.||+.||+|||++||+|+||||+||+++.++              ...
T Consensus        90 ~e~~~~~~L~~~l~~~----~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~~~--------------~~~  151 (316)
T 2ac3_A           90 FEKMRGGSILSHIHKR----RHFNELEASVVVQDVASALDFLHNKGIAHRDLKPENILCEHPN--------------QVS  151 (316)
T ss_dssp             EECCTTCBHHHHHHHH----SSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEESCSS--------------SSC
T ss_pred             EEcCCCCcHHHHHhcc----CCCCHHHHHHHHHHHHHHHHHHHhCCceeCCCCHHHEEEccCC--------------CcC
Confidence            9999999999999873    6789999999999999999999999999999999999998432              223


Q ss_pred             CeEEeecCCccccccCCC-----CccccccccCCCcccceeccC-----CCCCccchHhHHHHHHHHHHhCccccccccC
Q 018699          205 GLCLVDWGRGIDLHLFPD-----NMEFEGDCRTSGFRCIEMQEK-----KPWKFQVDTYGLCAIVHMMLHNSYMEIEKKA  274 (351)
Q Consensus       205 ~~~l~Dfg~a~~~~~~~~-----~~~~~~~~g~~~y~aPE~~~~-----~~~~~~~DiwslG~il~~l~~g~~p~~~~~~  274 (351)
                      .++|+|||++........     ........||+.|+|||++.+     ..++.++|||||||++|+|++|..||.....
T Consensus       152 ~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~  231 (316)
T 2ac3_A          152 PVKICDFDLGSGIKLNGDCSPISTPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCG  231 (316)
T ss_dssp             SEEECCTTCCC-------------------CCSGGGCCHHHHHHTSHHHHHHTTTHHHHHHHHHHHHHHHSSCSCCCCCC
T ss_pred             ceEEEEccCccccccCCccccccccccccccCCcCccChHHhhcccccccCCCcccccHhHHHHHHHHHHCCCCCccccc
Confidence            489999998865332111     112234568999999999865     4578999999999999999999999976543


Q ss_pred             CCCCce---------------eeecCcchh----hhhHHHHHHHHHHHHhcCCCCCChHHHHHHHHHHHH
Q 018699          275 SPDGGL---------------VYLPKLSFK----RYWKVELWKSLFTNLLNMSSGNDKEVLQNLQKSFQD  325 (351)
Q Consensus       275 ~~~~~~---------------~~~~~~~~~----~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~~~~~~  325 (351)
                      ....-.               ........+    ...+ +.+++||.+||..||.+||++.|+++|||..
T Consensus       232 ~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~-~~~~~li~~~L~~dP~~Rps~~e~l~hp~~~  300 (316)
T 2ac3_A          232 SDCGWDRGEACPACQNMLFESIQEGKYEFPDKDWAHIS-CAAKDLISKLLVRDAKQRLSAAQVLQHPWVQ  300 (316)
T ss_dssp             SCSCC----CCHHHHHHHHHHHHHCCCCCCHHHHTTSC-HHHHHHHHHHSCSSTTTSCCHHHHHHSTTCC
T ss_pred             ccccccccccchhHHHHHHHHHhccCcccCchhcccCC-HHHHHHHHHHhhCChhhCCCHHHHhcChhhc
Confidence            211000               000111111    1123 7899999999999999999999999998743

>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii}

Probab=100.00  E-value=1.6e-43  Score=314.51  Aligned_cols=258  Identities=14%  Similarity=0.118  Sum_probs=195.4

Q ss_pred             CeeEEEEEEeeccCceEEEEEEecCCCCceEEEEecCCCCCh-HHHHHHHHHhhhccccccccccceeeecccCeeEEEE
Q 018699           47 GKKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFPW-EFYMYRQLDQRISGRERSSFGFAHRIHLYSDYSILVC  125 (351)
Q Consensus        47 ~~~Y~i~~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~~~-e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~  125 (351)
                      .++|++.+.||+|+||+||+|. +..+++.||+|++...... ....+......+....+++++.+..++...+..++||
T Consensus        21 ~~~y~~~~~lg~G~~g~V~~~~-~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~   99 (285)
T 3is5_A           21 DDLFIFKRKLGSGAFGDVHLVE-ERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPNIIKIFEVFEDYHNMYIVM   99 (285)
T ss_dssp             HHHEEEEEEEEECSSCEEEEEE-ETTTCCEEEEEEEEGGGCCSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             hhheeecceeccCCCeEEEEEE-EccCCceEEEEEeeccccchhHHHHHHHHHHHHhCCCchHHhHHHheecCCeEEEEE
Confidence            3789999999999999999999 5678899999997654221 1222222233344557889999888888889999999


Q ss_pred             EecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeeccCCCCCcccCC
Q 018699          126 DYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSGPWQDQG  205 (351)
Q Consensus       126 e~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~~~~~~~~~~  205 (351)
                      ||+++++|.+.+......+..+++..++.++.|++.||.|||++||+|+||+|+||+++..+              .++.
T Consensus       100 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~dikp~NIl~~~~~--------------~~~~  165 (285)
T 3is5_A          100 ETCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFHSQHVVHKDLKPENILFQDTS--------------PHSP  165 (285)
T ss_dssp             CCCSCCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEESSSS--------------TTCC
T ss_pred             EeCCCCcHHHHHHhhhhcccCCCHHHHHHHHHHHHHHHHHHHhCCEEECCCCHHHEEEecCC--------------CCCC
Confidence            99999999999977655567899999999999999999999999999999999999996322              4577


Q ss_pred             eEEeecCCccccccCCCCccccccccCCCcccceeccCCCCCccchHhHHHHHHHHHHhCccccccccCCCCCcee---e
Q 018699          206 LCLVDWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQEKKPWKFQVDTYGLCAIVHMMLHNSYMEIEKKASPDGGLV---Y  282 (351)
Q Consensus       206 ~~l~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~p~~~~~~~~~~~~~---~  282 (351)
                      ++|+|||++....   .........|++.|+|||++. ..++.++|||||||++|+|++|..||............   .
T Consensus       166 ~kl~Dfg~a~~~~---~~~~~~~~~~t~~y~aPE~~~-~~~~~~~Di~slG~il~~ll~g~~pf~~~~~~~~~~~~~~~~  241 (285)
T 3is5_A          166 IKIIDFGLAELFK---SDEHSTNAAGTALYMAPEVFK-RDVTFKCDIWSAGVVMYFLLTGCLPFTGTSLEEVQQKATYKE  241 (285)
T ss_dssp             EEECCCCCCCC-------------CTTGGGCCHHHHT-TCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCC
T ss_pred             EEEEeeecceecC---CcccCcCcccccCcCChHHhc-cCCCcccCeehHHHHHHHHHhCCCCCCCCCHHHHHhhhccCC
Confidence            9999999986432   222334557899999999986 46789999999999999999999999654321000000   0


Q ss_pred             ecCcchhhhhHHHHHHHHHHHHhcCCCCCChHHHHHHHHHHH
Q 018699          283 LPKLSFKRYWKVELWKSLFTNLLNMSSGNDKEVLQNLQKSFQ  324 (351)
Q Consensus       283 ~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~~~~~  324 (351)
                      ..........+ +.+.+||.+||++||++||++.|+|+|||.
T Consensus       242 ~~~~~~~~~~~-~~~~~li~~~L~~dP~~Rps~~e~l~hp~f  282 (285)
T 3is5_A          242 PNYAVECRPLT-PQAVDLLKQMLTKDPERRPSAAQVLHHEWF  282 (285)
T ss_dssp             CCCCC--CCCC-HHHHHHHHHHTCSCTTTSCCHHHHHTSGGG
T ss_pred             cccccccCcCC-HHHHHHHHHHccCChhhCcCHHHHhcCHHh
Confidence            00000001122 788999999999999999999999999863

>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus}

Probab=100.00  E-value=1.7e-43  Score=320.55  Aligned_cols=255  Identities=18%  Similarity=0.192  Sum_probs=189.0

Q ss_pred             eeEEEEEEeeccCceEEEEEEecCCCCceEEEEecCCCCCh-HHHHHHHHHhhhccccccccccceeeeccc--------
Q 018699           48 KKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFPW-EFYMYRQLDQRISGRERSSFGFAHRIHLYS--------  118 (351)
Q Consensus        48 ~~Y~i~~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~~~-e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------  118 (351)
                      ++|++.+.||+|+||+||+|+ +..+|+.||||++...... ....+......+....|++++.....+...        
T Consensus         6 ~~y~~~~~lG~G~~g~V~~a~-~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~   84 (332)
T 3qd2_B            6 TDFEPIQCMGRGGFGVVFEAK-NKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLETPPEKWQEE   84 (332)
T ss_dssp             HHEEEEEEEECC-CSEEEEEE-ETTTCCEEEEEEEECCSTTTHHHHHHHHHHHHTSCCCTTBCCEEEEEEECCSCHHHHH
T ss_pred             hcCceeeEecCCCCeEEEEEE-EcCCCcEEEEEEeecCCchhHHHHHHHHHHHHHhCCCCCEeeEEEEEEEeccchhhhh
Confidence            579999999999999999999 5678899999998754322 222233333344555788888777654322        


Q ss_pred             -------------------------------------------------CeeEEEEEecCCCCHHHHHHHHHhhCCChhH
Q 018699          119 -------------------------------------------------DYSILVCDYLSQGTLQDAINSYVVIGKSMEE  149 (351)
Q Consensus       119 -------------------------------------------------~~~~lv~e~~~~~sL~~~l~~~~~~~~~l~~  149 (351)
                                                                       ...++||||+++++|.+++..... ....++
T Consensus        85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~-~~~~~~  163 (332)
T 3qd2_B           85 MDEIWLKDESTDWPLSSPSPMDAPSVKIRRMDPFSTKNTVGQLQPSSPKVYLYIQMQLCRKENLKDWMNRRCS-LEDREH  163 (332)
T ss_dssp             HHC--------------------------------------------CCCEEEEEEECCCSSCHHHHHHTCCS-GGGSCH
T ss_pred             hhhhhhccccccccccCCCcccccccceeeccccCcccccccccCCCCCceEEEEEEecCCCCHHHHHhcccC-ccchhh
Confidence                                                             247999999999999999987421 123355


Q ss_pred             HHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeeccCCCCCcccCCeEEeecCCccccccCCCC------
Q 018699          150 VLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSGPWQDQGLCLVDWGRGIDLHLFPDN------  223 (351)
Q Consensus       150 ~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~~~~~~~~~~~~l~Dfg~a~~~~~~~~~------  223 (351)
                      ..++.++.||+.||+|||++||+||||||+||+++                 .++.++|+|||++.........      
T Consensus       164 ~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~-----------------~~~~~kL~DfG~a~~~~~~~~~~~~~~~  226 (332)
T 3qd2_B          164 GVCLHIFIQIAEAVEFLHSKGLMHRDLKPSNIFFT-----------------MDDVVKVGDFGLVTAMDQDEEEQTVLTP  226 (332)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEC-----------------TTCCEEECCCTTCEECSCC---------
T ss_pred             HHHHHHHHHHHHHHHHHHhCCeeecCCCcccEEEe-----------------CCCCEEEeecCcccccccchhhcccccc
Confidence            56899999999999999999999999999999999                 7788999999998764432111      


Q ss_pred             ----ccccccccCCCcccceeccCCCCCccchHhHHHHHHHHHHhCccccccccCCCCCceeeecCcchhhhhHHHHHHH
Q 018699          224 ----MEFEGDCRTSGFRCIEMQEKKPWKFQVDTYGLCAIVHMMLHNSYMEIEKKASPDGGLVYLPKLSFKRYWKVELWKS  299 (351)
Q Consensus       224 ----~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  299 (351)
                          .......||+.|+|||++.+..++.++|||||||++|+|++|..|+......... ......+....... +.+.+
T Consensus       227 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~-~~~~~  304 (332)
T 3qd2_B          227 MPAYATHTGQVGTKLYMSPEQIHGNNYSHKVDIFSLGLILFELLYSFSTQMERVRIITD-VRNLKFPLLFTQKY-PQEHM  304 (332)
T ss_dssp             -----CCCSCC-CGGGSCHHHHHCCCCCTHHHHHHHHHHHHHHHSCCCCHHHHHHHHHH-HHTTCCCHHHHHHC-HHHHH
T ss_pred             ccccccccccCCCcCccChHHhcCCCCcchhhHHHHHHHHHHHHHcCCChhHHHHHHHH-hhccCCCcccccCC-hhHHH
Confidence                1223457899999999999999999999999999999999998876543211000 00001111122223 67799


Q ss_pred             HHHHHhcCCCCCChHHHHHHHHHH
Q 018699          300 LFTNLLNMSSGNDKEVLQNLQKSF  323 (351)
Q Consensus       300 li~~~L~~dP~~R~s~~e~l~~~~  323 (351)
                      ||.+||++||.+||++.|+++|||
T Consensus       305 li~~~l~~~p~~Rps~~~~l~~~~  328 (332)
T 3qd2_B          305 MVQDMLSPSPTERPEATDIIENAI  328 (332)
T ss_dssp             HHHHHHCSSGGGSCCHHHHHHSTT
T ss_pred             HHHHHccCCCCcCCCHHHHhhchh
Confidence            999999999999999999999986

>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens}

Probab=100.00  E-value=1.1e-43  Score=327.05  Aligned_cols=255  Identities=16%  Similarity=0.153  Sum_probs=195.7

Q ss_pred             eeEEE--EEEeeccCceEEEEEEecCCCCceEEEEecCCCCChHHHHHHHHHhhhccccccccccceeeecccCeeEEEE
Q 018699           48 KKYQI--KGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFPWEFYMYRQLDQRISGRERSSFGFAHRIHLYSDYSILVC  125 (351)
Q Consensus        48 ~~Y~i--~~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~  125 (351)
                      ..|.+  .+.||+|+||.||+|. +..+|+.||+|++..........+......+....|++++.+..++...+..++||
T Consensus        87 ~~~~~~~~~~lG~G~~g~Vy~a~-~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~  165 (373)
T 2x4f_A           87 SFYTVSKTEILGGGRFGQVHKCE-ETATGLKLAAKIIKTRGMKDKEEVKNEISVMNQLDHANLIQLYDAFESKNDIVLVM  165 (373)
T ss_dssp             GTEEEEEEEECC-----CEEEEE-ETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             cceeeecceEEecCcCEEEEEEE-EcCCCcEEEEEEEcccccccHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEE
Confidence            34555  7789999999999999 56788999999988754433333333344455667899999999888889999999


Q ss_pred             EecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeeccCCCCCcccCC
Q 018699          126 DYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSGPWQDQG  205 (351)
Q Consensus       126 e~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~~~~~~~~~~  205 (351)
                      ||+++++|.+++...   +..+++..++.++.||+.||.|||++||+||||||+||++..+               .++.
T Consensus       166 E~~~~~~L~~~l~~~---~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~---------------~~~~  227 (373)
T 2x4f_A          166 EYVDGGELFDRIIDE---SYNLTELDTILFMKQICEGIRHMHQMYILHLDLKPENILCVNR---------------DAKQ  227 (373)
T ss_dssp             ECCTTCEEHHHHHHT---GGGCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEEET---------------TTTE
T ss_pred             eCCCCCcHHHHHHhc---CCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCHHHEEEecC---------------CCCc
Confidence            999999999988764   3568999999999999999999999999999999999999532               3456


Q ss_pred             eEEeecCCccccccCCCCccccccccCCCcccceeccCCCCCccchHhHHHHHHHHHHhCccccccccCCCCCcee----
Q 018699          206 LCLVDWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQEKKPWKFQVDTYGLCAIVHMMLHNSYMEIEKKASPDGGLV----  281 (351)
Q Consensus       206 ~~l~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~p~~~~~~~~~~~~~----  281 (351)
                      ++|+|||++....   .........||+.|+|||++.+..++.++|||||||++|+|++|..||............    
T Consensus       228 ~kl~DFG~a~~~~---~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~i~~~~  304 (373)
T 2x4f_A          228 IKIIDFGLARRYK---PREKLKVNFGTPEFLAPEVVNYDFVSFPTDMWSVGVIAYMLLSGLSPFLGDNDAETLNNILACR  304 (373)
T ss_dssp             EEECCCSSCEECC---TTCBCCCCCSSCTTCCHHHHTTCBCCHHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHHTC
T ss_pred             EEEEeCCCceecC---CccccccccCCCcEeChhhccCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcc
Confidence            9999999987543   223334557999999999999888999999999999999999999999754322100000    


Q ss_pred             eecCcchhhhhHHHHHHHHHHHHhcCCCCCChHHHHHHHHHHHH
Q 018699          282 YLPKLSFKRYWKVELWKSLFTNLLNMSSGNDKEVLQNLQKSFQD  325 (351)
Q Consensus       282 ~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~~~~~~  325 (351)
                      +..........+ +.+++||.+||.+||.+||++.|+|+|||..
T Consensus       305 ~~~~~~~~~~~~-~~~~~li~~~L~~dp~~Rps~~e~l~hp~~~  347 (373)
T 2x4f_A          305 WDLEDEEFQDIS-EEAKEFISKLLIKEKSWRISASEALKHPWLS  347 (373)
T ss_dssp             CCSCSGGGTTSC-HHHHHHHHTTSCSSGGGSCCHHHHHHSHHHH
T ss_pred             CCCChhhhccCC-HHHHHHHHHHcCCChhhCCCHHHHhcCcCcC
Confidence            011111112233 7899999999999999999999999998754

>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A*

Probab=100.00  E-value=1.4e-43  Score=322.01  Aligned_cols=255  Identities=19%  Similarity=0.214  Sum_probs=203.5

Q ss_pred             cCeeEEEEEEeeccCceEEEEEEecCCCCceEEEEecCCCCCh---HHHHHHHHHhhhccccccccccceeeecccCeeE
Q 018699           46 GGKKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFPW---EFYMYRQLDQRISGRERSSFGFAHRIHLYSDYSI  122 (351)
Q Consensus        46 ~~~~Y~i~~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~~~---e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  122 (351)
                      ..++|++.+.||+|+||.||+|. +..+++.||+|++......   ..+.+...........|++++.+..++...+..|
T Consensus        39 ~~~~y~~~~~lg~G~~g~Vy~~~-~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~  117 (335)
T 2owb_A           39 SRRRYVRGRFLGKGGFAKCFEIS-DADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVF  117 (335)
T ss_dssp             TTEEEEEEEEEEEETTEEEEEEE-ETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEE
T ss_pred             cCCceEEEEEEeeCCCeEEEEEE-ECCCCCEEEEEEechhhhcCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEE
Confidence            35899999999999999999999 5778899999998654221   1222222233344567889999888888889999


Q ss_pred             EEEEecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeeccCCCCCcc
Q 018699          123 LVCDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSGPWQ  202 (351)
Q Consensus       123 lv~e~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~~~~~~~  202 (351)
                      +||||+.+++|.+++..    +..+++..++.++.||+.||.|||++||+|+||+|+||+++                 .
T Consensus       118 lv~e~~~~~~L~~~~~~----~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIl~~-----------------~  176 (335)
T 2owb_A          118 VVLELCRRRSLLELHKR----RKALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLN-----------------E  176 (335)
T ss_dssp             EEECCCTTCBHHHHHHH----HCSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEEC-----------------T
T ss_pred             EEEecCCCCCHHHHHhc----cCCCCHHHHHHHHHHHHHHHHHHHHCCCEecCCCchhEEEc-----------------C
Confidence            99999999999999887    36799999999999999999999999999999999999999                 7


Q ss_pred             cCCeEEeecCCccccccCCCCccccccccCCCcccceeccCCCCCccchHhHHHHHHHHHHhCccccccccCCCCCceee
Q 018699          203 DQGLCLVDWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQEKKPWKFQVDTYGLCAIVHMMLHNSYMEIEKKASPDGGLVY  282 (351)
Q Consensus       203 ~~~~~l~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~p~~~~~~~~~~~~~~  282 (351)
                      ++.++|+|||++.....  .........|++.|+|||++.+..++.++||||||+++|+|++|..||.............
T Consensus       177 ~~~~kl~Dfg~~~~~~~--~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~  254 (335)
T 2owb_A          177 DLEVKIGDFGLATKVEY--DGERKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIK  254 (335)
T ss_dssp             TCCEEECCCTTCEECCS--TTCCBCCCCSCCSSCCHHHHHTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHH
T ss_pred             CCCEEEeeccCceeccc--CcccccccCCCccccCHHHhccCCCCchhhHHHHHHHHHHHHHCcCCCCCCCHHHHHHHHh
Confidence            78899999999875432  1223344578999999999998889999999999999999999999996543211000011


Q ss_pred             ecCcchhhhhHHHHHHHHHHHHhcCCCCCChHHHHHHHHHHHH
Q 018699          283 LPKLSFKRYWKVELWKSLFTNLLNMSSGNDKEVLQNLQKSFQD  325 (351)
Q Consensus       283 ~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~~~~~~  325 (351)
                      .....++..++ +.+.+||.+||+.||++||++.|+++|+|..
T Consensus       255 ~~~~~~~~~~~-~~~~~li~~~l~~dp~~Rps~~ell~~~~~~  296 (335)
T 2owb_A          255 KNEYSIPKHIN-PVAASLIQKMLQTDPTARPTINELLNDEFFT  296 (335)
T ss_dssp             HTCCCCCTTSC-HHHHHHHHHHTCSSGGGSCCGGGGGGSHHHH
T ss_pred             cCCCCCCccCC-HHHHHHHHHHccCChhHCcCHHHHhcCcccc
Confidence            12222333444 7889999999999999999999999998754

>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A*

Probab=100.00  E-value=8.7e-43  Score=315.09  Aligned_cols=262  Identities=14%  Similarity=0.131  Sum_probs=197.6

Q ss_pred             ccCCCcceEEEEcCeeEEEEEEeeccCceEEEEEEecCCCCceEEEEecCCCCChHHHHHHHHHhhhcccccccccccee
Q 018699           34 LNNSSRNKTIEIGGKKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFPWEFYMYRQLDQRISGRERSSFGFAHR  113 (351)
Q Consensus        34 ~~~~~~~~~~~i~~~~Y~i~~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~  113 (351)
                      .....++..+.+..++|++.+.||+|+||+||+|++.   ++.||||++............++ ..+....|++++.+..
T Consensus        10 ~~~~~~~~n~~~~~~~y~~~~~lg~G~~g~Vy~~~~~---~~~vavK~~~~~~~~~~~~~~E~-~~l~~l~hpniv~~~~   85 (322)
T 3soc_A           10 SGVDLGTENLYFQSMPLQLLEVKARGRFGCVWKAQLL---NEYVAVKIFPIQDKQSWQNEYEV-YSLPGMKHENILQFIG   85 (322)
T ss_dssp             ----CCCCCEEETTEEEEEEEEEECSTTCEEEEEEET---TEEEEEEEECGGGHHHHHHHHHH-HTSTTCCCTTBCCEEE
T ss_pred             cccccCccccccchhhchhhheecccCceEEEEEEEC---CCEEEEEEeecCchHHHHHHHHH-HHHhcCCCCCchhhcc
Confidence            3445566778899999999999999999999999853   68999999875432222222222 2344556888888887


Q ss_pred             eeccc----CeeEEEEEecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHC----------CceecCCCCC
Q 018699          114 IHLYS----DYSILVCDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDV----------GIIHGDFKPD  179 (351)
Q Consensus       114 ~~~~~----~~~~lv~e~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~----------~i~H~dl~p~  179 (351)
                      ++...    ..+++||||+++++|.+++..     ..+++..++.++.|++.|++|||+.          ||+||||||+
T Consensus        86 ~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~-----~~~~~~~~~~i~~qi~~al~~LH~~~~~l~~~~~~~ivH~Dlkp~  160 (322)
T 3soc_A           86 AEKRGTSVDVDLWLITAFHEKGSLSDFLKA-----NVVSWNELCHIAETMARGLAYLHEDIPGLKDGHKPAISHRDIKSK  160 (322)
T ss_dssp             EEEEECSSSEEEEEEEECCTTCBHHHHHHH-----CCBCHHHHHHHHHHHHHHHHHHTCCEEEETTEEECEEECSCCSGG
T ss_pred             eeccCCCCCceEEEEEecCCCCCHHHHHHh-----cCCCHHHHHHHHHHHHHHHHHHHhhccccccccCCCEEeCCCChH
Confidence            77653    347999999999999999976     4699999999999999999999999          9999999999


Q ss_pred             cEEEeecCCcceeeccCCCCCcccCCeEEeecCCccccccCCCCccccccccCCCcccceeccCC-----CCCccchHhH
Q 018699          180 NLLIRYARDELTVLDHDRSGPWQDQGLCLVDWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQEKK-----PWKFQVDTYG  254 (351)
Q Consensus       180 Nill~~~~~~~~~~~~~~~~~~~~~~~~l~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~-----~~~~~~Diws  254 (351)
                      ||+++                 .++.+||+|||++................||+.|+|||++.+.     .++.++||||
T Consensus       161 Nill~-----------------~~~~~kL~DFg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~Diws  223 (322)
T 3soc_A          161 NVLLK-----------------NNLTACIADFGLALKFEAGKSAGDTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYA  223 (322)
T ss_dssp             GEEEC-----------------TTCCEEECCCTTCEEECTTSCCCCCTTCCCCGGGCCHHHHTTCCCCCHHHHHHHHHHH
T ss_pred             hEEEC-----------------CCCeEEEccCCcccccccccCccccccCccCccccCHhhcccccccCcCCCccchhHH
Confidence            99998                 7788999999999754433323334446789999999999763     4457889999


Q ss_pred             HHHHHHHHHhCccccccccCCCCCcee------------------eecCcchhhhh----HHHHHHHHHHHHhcCCCCCC
Q 018699          255 LCAIVHMMLHNSYMEIEKKASPDGGLV------------------YLPKLSFKRYW----KVELWKSLFTNLLNMSSGND  312 (351)
Q Consensus       255 lG~il~~l~~g~~p~~~~~~~~~~~~~------------------~~~~~~~~~~~----~~~~~~~li~~~L~~dP~~R  312 (351)
                      |||++|+|++|..||..........+.                  ....+..+..+    ..+.+.+||.+||+.||++|
T Consensus       224 lG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~R  303 (322)
T 3soc_A          224 MGLVLWELASRCTAADGPVDEYMLPFEEEIGQHPSLEDMQEVVVHKKKRPVLRDYWQKHAGMAMLCETIEECWDHDAEAR  303 (322)
T ss_dssp             HHHHHHHHHTTBTTSSSCCCCCCCTTHHHHCSSCCHHHHHHHHTTSCCCCCCCGGGGSSHHHHHHHHHHHHHTCSSGGGS
T ss_pred             HHHHHHHHHhCCCCCCCCcchhccchhhhhccCCchhhhhhhhhcccCCCCccccccccchHHHHHHHHHHHccCChhhC
Confidence            999999999999998754432111110                  00111111111    11569999999999999999


Q ss_pred             hHHHHHHHH
Q 018699          313 KEVLQNLQK  321 (351)
Q Consensus       313 ~s~~e~l~~  321 (351)
                      ||+.++++.
T Consensus       304 ps~~ell~~  312 (322)
T 3soc_A          304 LSAGCVGER  312 (322)
T ss_dssp             CCHHHHHHH
T ss_pred             cCHHHHHHH
Confidence            999999874

>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens}

Probab=100.00  E-value=4.7e-43  Score=315.09  Aligned_cols=254  Identities=19%  Similarity=0.179  Sum_probs=191.9

Q ss_pred             eeEEEEEEeeccCceEEEEEEecCCCCceEEEEecCCCCChHH--HHHHHHHhhhccccccccccceeeecccCeeEEEE
Q 018699           48 KKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFPWEF--YMYRQLDQRISGRERSSFGFAHRIHLYSDYSILVC  125 (351)
Q Consensus        48 ~~Y~i~~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~~~e~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~  125 (351)
                      ++|++.+.||+|+||+||+|. +..+|+.||+|++........  ..............|++++.+..++...+..++||
T Consensus         3 ~~y~~~~~lg~G~~g~V~~~~-~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~   81 (311)
T 4agu_A            3 EKYEKIGKIGEGSYGVVFKCR-NRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVNLLEVFRRKRRLHLVF   81 (311)
T ss_dssp             CCEEEEEEEEECSSEEEEEEE-ETTTCCEEEEEEECCCCC-HHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred             ccceEeeEEeecCCeEEEEEE-eCCCCcEEEEEEeeccccchHHHHHHHHHHHHHHhCCCCCccchhheeecCCeEEEEE
Confidence            589999999999999999999 577789999999876544321  12222223344556888999888888889999999


Q ss_pred             EecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeeccCCCCCcccCC
Q 018699          126 DYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSGPWQDQG  205 (351)
Q Consensus       126 e~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~~~~~~~~~~  205 (351)
                      ||+++++|.+++..    ...+++..++.++.|++.|+.|||++||+|+||+|+||+++                 .++.
T Consensus        82 e~~~~~~l~~~~~~----~~~~~~~~~~~i~~~l~~~l~~lH~~~ivH~dlkp~Nil~~-----------------~~~~  140 (311)
T 4agu_A           82 EYCDHTVLHELDRY----QRGVPEHLVKSITWQTLQAVNFCHKHNCIHRDVKPENILIT-----------------KHSV  140 (311)
T ss_dssp             ECCSEEHHHHHHHT----SSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEC-----------------TTSC
T ss_pred             EeCCCchHHHHHhh----hcCCCHHHHHHHHHHHHHHHHHHHHCCCcCCCCChhhEEEc-----------------CCCC
Confidence            99999899888776    56799999999999999999999999999999999999999                 7788


Q ss_pred             eEEeecCCccccccCCCCccccccccCCCcccceeccC-CCCCccchHhHHHHHHHHHHhCccccccccCCCCC------
Q 018699          206 LCLVDWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQEK-KPWKFQVDTYGLCAIVHMMLHNSYMEIEKKASPDG------  278 (351)
Q Consensus       206 ~~l~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~~DiwslG~il~~l~~g~~p~~~~~~~~~~------  278 (351)
                      ++|+|||.+.....  .........|++.|+|||++.+ ..++.++||||||+++|+|++|..||.........      
T Consensus       141 ~kl~Dfg~~~~~~~--~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~  218 (311)
T 4agu_A          141 IKLCDFGFARLLTG--PSDYYDDEVATRWYRSPELLVGDTQYGPPVDVWAIGCVFAELLSGVPLWPGKSDVDQLYLIRKT  218 (311)
T ss_dssp             EEECCCTTCEECC--------------GGGCCHHHHHTCSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHH
T ss_pred             EEEeeCCCchhccC--cccccCCCcCCccccChHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHH
Confidence            99999999865331  1222345578999999999876 66799999999999999999999998643221000      


Q ss_pred             -------------------ceeeecC---cchh---hhhHHHHHHHHHHHHhcCCCCCChHHHHHHHHHHHHH
Q 018699          279 -------------------GLVYLPK---LSFK---RYWKVELWKSLFTNLLNMSSGNDKEVLQNLQKSFQDY  326 (351)
Q Consensus       279 -------------------~~~~~~~---~~~~---~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~~~~~~~  326 (351)
                                         .......   ....   ...+ +.+.+||.+||++||.+|||+.|+++|||..-
T Consensus       219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~li~~~L~~dP~~Rpt~~ell~hp~f~~  290 (311)
T 4agu_A          219 LGDLIPRHQQVFSTNQYFSGVKIPDPEDMEPLELKFPNIS-YPALGLLKGCLHMDPTERLTCEQLLHHPYFEN  290 (311)
T ss_dssp             HCSCCHHHHHHHHTCGGGTTCCCCCCSSCCCHHHHCTTCC-HHHHHHHHHHCCSSTTTSCCHHHHHTSGGGTT
T ss_pred             hcccccccccccccccccccCcCCCccccchhhhhccccc-HHHHHHHHHHccCChhhcCCHHHHhcChHHHh
Confidence                               0000000   0000   1123 67899999999999999999999999986443

>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*

Probab=100.00  E-value=2.4e-43  Score=336.02  Aligned_cols=257  Identities=18%  Similarity=0.180  Sum_probs=203.4

Q ss_pred             CeeEEEEEEeeccCceEEEEEEecCCCCceEEEEecCCCCC---hHHHHHHHHHhhhccccccccccceeeecccCeeEE
Q 018699           47 GKKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFP---WEFYMYRQLDQRISGRERSSFGFAHRIHLYSDYSIL  123 (351)
Q Consensus        47 ~~~Y~i~~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~~---~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  123 (351)
                      .++|++.+.||+|+||+||+|+ +..+|+.||||++.+...   .....+...........|++++.+..++...+..|+
T Consensus        25 ~~~y~~~~~lg~G~~g~V~~~~-~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~l  103 (484)
T 3nyv_A           25 SDRYKGQRVLGKGSFGEVILCK-DKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYL  103 (484)
T ss_dssp             HHHEEEEEEEEEETTEEEEEEE-ETTTCCEEEEEEEETTTCCBSSCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEE
T ss_pred             cCceEEeeEEecCCCEEEEEEE-ECCCCCEEEEEEEEhhhcccchHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEE
Confidence            5789999999999999999999 577899999999865422   122222222334455678999999999888999999


Q ss_pred             EEEecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeeccCCCCCccc
Q 018699          124 VCDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSGPWQD  203 (351)
Q Consensus       124 v~e~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~~~~~~~~  203 (351)
                      ||||+.+++|.+.+..    ...+++..++.++.||+.||.|||++||+||||||+||+++..+              .+
T Consensus       104 v~e~~~~~~L~~~~~~----~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~--------------~~  165 (484)
T 3nyv_A          104 VGEVYTGGELFDEIIS----RKRFSEVDAARIIRQVLSGITYMHKNKIVHRDLKPENLLLESKS--------------KD  165 (484)
T ss_dssp             EECCCCSCBHHHHHHT----CSCCBHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESSSS--------------TT
T ss_pred             EEecCCCCCHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHHEEEecCC--------------CC
Confidence            9999999999999877    57899999999999999999999999999999999999996332              46


Q ss_pred             CCeEEeecCCccccccCCCCccccccccCCCcccceeccCCCCCccchHhHHHHHHHHHHhCccccccccCCCCCcee--
Q 018699          204 QGLCLVDWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQEKKPWKFQVDTYGLCAIVHMMLHNSYMEIEKKASPDGGLV--  281 (351)
Q Consensus       204 ~~~~l~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~p~~~~~~~~~~~~~--  281 (351)
                      +.++|+|||++....   .........||+.|+|||++.+ .++.++|||||||++|+|++|.+||............  
T Consensus       166 ~~~kl~Dfg~a~~~~---~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~  241 (484)
T 3nyv_A          166 ANIRIIDFGLSTHFE---ASKKMKDKIGTAYYIAPEVLHG-TYDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEK  241 (484)
T ss_dssp             CCEEECCTTHHHHBC---CCCSHHHHTTGGGTCCHHHHHT-CCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHH
T ss_pred             CcEEEEeeeeeEEcc---cccccccCCCCccccCceeecC-CCCCcceeHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHc
Confidence            779999999986533   2333455679999999999876 5899999999999999999999999754332100000  


Q ss_pred             --eecCcchhhhhHHHHHHHHHHHHhcCCCCCChHHHHHHHHHHHHHH
Q 018699          282 --YLPKLSFKRYWKVELWKSLFTNLLNMSSGNDKEVLQNLQKSFQDYL  327 (351)
Q Consensus       282 --~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~~~~~~~~  327 (351)
                        .....+.....+ +.+++||.+||.+||.+|||+.|+|+|||....
T Consensus       242 ~~~~~~~~~~~~~s-~~~~~li~~~L~~dp~~R~s~~e~l~h~~~~~~  288 (484)
T 3nyv_A          242 GKYTFELPQWKKVS-ESAKDLIRKMLTYVPSMRISARDALDHEWIQTY  288 (484)
T ss_dssp             CCCCCCSGGGGGSC-HHHHHHHHHHTCSSGGGSCCHHHHHTSHHHHHH
T ss_pred             CCCCCCCcccccCC-HHHHHHHHHHCCCChhHCcCHHHHhhChhhccc
Confidence              011111112334 789999999999999999999999999986544

>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A*

Probab=100.00  E-value=3.4e-43  Score=332.50  Aligned_cols=251  Identities=20%  Similarity=0.238  Sum_probs=187.2

Q ss_pred             CeeEEEEEEeeccCceEEEEEEecCCCCceEEEEecCCCCChHHHH--HHHHHhhhccccccccccceeeeccc------
Q 018699           47 GKKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFPWEFYM--YRQLDQRISGRERSSFGFAHRIHLYS------  118 (351)
Q Consensus        47 ~~~Y~i~~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~~~e~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~------  118 (351)
                      .++|++.+.||+|+||+||+|+ +..+++.||||++..........  .......+....|++++.+..++...      
T Consensus        61 ~~~y~~~~~lG~G~~g~V~~a~-~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~  139 (464)
T 3ttj_A           61 LKRYQNLKPIGSGAQGIVCAAY-DAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEF  139 (464)
T ss_dssp             ETTEEEEEEEEECSSCEEEEEE-ETTTTEEEEEEEEESGGGSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCCSTTTC
T ss_pred             cCCeEEEEEeecCCCeEEEEEE-ECCCCCEEEEEEECccccChHHHHHHHHHHHHHHhCCCCCCCcEEEEEccCCccccC
Confidence            4789999999999999999999 57789999999987653322211  11112233445688888888776543      


Q ss_pred             CeeEEEEEecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeeccCCC
Q 018699          119 DYSILVCDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRS  198 (351)
Q Consensus       119 ~~~~lv~e~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~~~  198 (351)
                      ...|+||||+.+ +|.+.+.      ..+++..++.++.||+.||+|||++||+||||||+||+++              
T Consensus       140 ~~~~lv~E~~~~-~l~~~~~------~~l~~~~~~~~~~qil~aL~~lH~~~iiHrDlkp~NIll~--------------  198 (464)
T 3ttj_A          140 QDVYLVMELMDA-NLCQVIQ------MELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVK--------------  198 (464)
T ss_dssp             CEEEEEEECCSE-EHHHHHT------SCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEC--------------
T ss_pred             CeEEEEEeCCCC-CHHHHHh------hcCCHHHHHHHHHHHHHHHHHHHHCCcccCCCChHhEEEe--------------
Confidence            467999999954 6666653      3588999999999999999999999999999999999999              


Q ss_pred             CCcccCCeEEeecCCccccccCCCCccccccccCCCcccceeccCCCCCccchHhHHHHHHHHHHhCccccccccCCCCC
Q 018699          199 GPWQDQGLCLVDWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQEKKPWKFQVDTYGLCAIVHMMLHNSYMEIEKKASPDG  278 (351)
Q Consensus       199 ~~~~~~~~~l~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~p~~~~~~~~~~  278 (351)
                         .++.+||+|||++....   ........+||+.|+|||++.+..++.++|||||||++|+|++|..||.........
T Consensus       199 ---~~~~~kl~DFG~a~~~~---~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pF~g~~~~~~~  272 (464)
T 3ttj_A          199 ---SDCTLKILDFGLARTAG---TSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQW  272 (464)
T ss_dssp             ---TTSCEEECCCCCC--------CCCC----CCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHH
T ss_pred             ---CCCCEEEEEEEeeeecC---CCcccCCCcccccccCHHHHcCCCCCHHHHHHHHHHHHHHHHhCCCCCCCCCHHHHH
Confidence               77889999999996533   222345568999999999999999999999999999999999999999654311000


Q ss_pred             ---------------------------ceeeecCcchhhh--------------hHHHHHHHHHHHHhcCCCCCChHHHH
Q 018699          279 ---------------------------GLVYLPKLSFKRY--------------WKVELWKSLFTNLLNMSSGNDKEVLQ  317 (351)
Q Consensus       279 ---------------------------~~~~~~~~~~~~~--------------~~~~~~~~li~~~L~~dP~~R~s~~e  317 (351)
                                                 .........++..              ..++.+++||.+||.+||++|||+.|
T Consensus       273 ~~i~~~lg~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e  352 (464)
T 3ttj_A          273 NKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDD  352 (464)
T ss_dssp             HHHHHHHCSCCHHHHTTSCHHHHHHHTTSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSTTTSCCHHH
T ss_pred             HHHHHhcCCCCHHHHHHcchhhhhHhhcccccCCCChHHhCcccccccccccccccCHHHHHHHHHHcCCChhhCCCHHH
Confidence                                       0000001111111              01267999999999999999999999


Q ss_pred             HHHHHHHH
Q 018699          318 NLQKSFQD  325 (351)
Q Consensus       318 ~l~~~~~~  325 (351)
                      +|+|||..
T Consensus       353 ~L~Hp~~~  360 (464)
T 3ttj_A          353 ALQHPYIN  360 (464)
T ss_dssp             HHTSTTTG
T ss_pred             HhcChhhh
Confidence            99999855

>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}

Probab=100.00  E-value=2.9e-43  Score=318.51  Aligned_cols=274  Identities=17%  Similarity=0.195  Sum_probs=198.3

Q ss_pred             cCeeEEEEEEeeccCceEEEEEEecCCCCceEEEEecCCCCChHHHHHHHHHhhhccccccccccceeeecc------cC
Q 018699           46 GGKKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFPWEFYMYRQLDQRISGRERSSFGFAHRIHLY------SD  119 (351)
Q Consensus        46 ~~~~Y~i~~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~  119 (351)
                      ..++|++.+.||+|+||+||+|+ +..+++.||+|++...........+++........|++++....++..      .+
T Consensus        22 ~~~~y~~~~~lg~G~~g~Vy~~~-~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~~  100 (326)
T 2x7f_A           22 PAGIFELVELVGNGTYGQVYKGR-HVKTGQLAAIKVMDVTGDEEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGMDD  100 (326)
T ss_dssp             CTTTEEEEEEEEEETTEEEEEEE-ETTTCCEEEEEEEECCSSTTHHHHHHHHHHHHHCCSTTBCCEEEEEEECC--CCCC
T ss_pred             CCCcEEEEEEeccCCCEEEEEEE-ECCCCCeEEEEEEecCcccHHHHHHHHHHHHhccCCCCeeeeeeEEeeccCccccc
Confidence            46789999999999999999999 567789999999875544333333333322222357788877777654      46


Q ss_pred             eeEEEEEecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeeccCCCC
Q 018699          120 YSILVCDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSG  199 (351)
Q Consensus       120 ~~~lv~e~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~~~~  199 (351)
                      ..++||||+++++|.+++....  +..+++..++.++.||+.||.|||++||+|+||+|+||+++               
T Consensus       101 ~~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dlkp~NIl~~---------------  163 (326)
T 2x7f_A          101 QLWLVMEFCGAGSVTDLIKNTK--GNTLKEEWIAYICREILRGLSHLHQHKVIHRDIKGQNVLLT---------------  163 (326)
T ss_dssp             EEEEEEECCTTEEHHHHHHHSG--GGCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEEC---------------
T ss_pred             eEEEEEEcCCCCcHHHHHHhcc--cCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCcHHHEEEc---------------
Confidence            7899999999999999998742  35789999999999999999999999999999999999998               


Q ss_pred             CcccCCeEEeecCCccccccCCCCccccccccCCCcccceecc-----CCCCCccchHhHHHHHHHHHHhCccccccccC
Q 018699          200 PWQDQGLCLVDWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQE-----KKPWKFQVDTYGLCAIVHMMLHNSYMEIEKKA  274 (351)
Q Consensus       200 ~~~~~~~~l~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~-----~~~~~~~~DiwslG~il~~l~~g~~p~~~~~~  274 (351)
                        .++.++|+|||++......  ........|++.|+|||++.     +..++.++|||||||++|+|++|..||.....
T Consensus       164 --~~~~~kl~Dfg~~~~~~~~--~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~  239 (326)
T 2x7f_A          164 --ENAEVKLVDFGVSAQLDRT--VGRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHP  239 (326)
T ss_dssp             --TTCCEEECCCTTTC---------------CCGGGCCHHHHC--------CCTTHHHHHHHHHHHHHHHSSCTTTTSCH
T ss_pred             --CCCCEEEeeCcCceecCcC--ccccccccCCccccChhhhccccccCcCCCccchHHHHHHHHHHHHhCCCCCCCCcH
Confidence              6788999999988653311  11233456899999999986     56688999999999999999999999864332


Q ss_pred             CCCCcee-e-ecCcchhhhhHHHHHHHHHHHHhcCCCCCChHHHHHHHHHHHHHHhhChHHHHHHHHHHH
Q 018699          275 SPDGGLV-Y-LPKLSFKRYWKVELWKSLFTNLLNMSSGNDKEVLQNLQKSFQDYLCSNPQLLKNLKELLA  342 (351)
Q Consensus       275 ~~~~~~~-~-~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~~~~~~~~~~~~~~~~~~~~~~~  342 (351)
                      ....... . ......+..++ +.+.+||.+||..||.+||++.++++|||..-.....+....+...+.
T Consensus       240 ~~~~~~~~~~~~~~~~~~~~~-~~l~~li~~~l~~dp~~Rps~~~ll~hp~~~~~~~~~~~~~~~~~~~~  308 (326)
T 2x7f_A          240 MRALFLIPRNPAPRLKSKKWS-KKFQSFIESCLVKNHSQRPATEQLMKHPFIRDQPNERQVRIQLKDHID  308 (326)
T ss_dssp             HHHHHHHHHSCCCCCSCSCSC-HHHHHHHHHHCCSSGGGSCCHHHHHTSHHHHCCTTHHHHHHHHHHHHH
T ss_pred             HHHHHHhhcCccccCCccccC-HHHHHHHHHHhccChhhCCCHHHHhhChHHhhCccccceeehhhhhhh
Confidence            1000000 0 01111122334 789999999999999999999999999875543333444444444443

>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A*

Probab=100.00  E-value=4.9e-43  Score=316.04  Aligned_cols=259  Identities=18%  Similarity=0.196  Sum_probs=184.2

Q ss_pred             CeeEEEEEEeeccCceEEEEEEecCCCCceEEEEecCCCCCh-HHHHHHHHHhhhccccccccccceeeecccCeeEEEE
Q 018699           47 GKKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFPW-EFYMYRQLDQRISGRERSSFGFAHRIHLYSDYSILVC  125 (351)
Q Consensus        47 ~~~Y~i~~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~~~-e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~  125 (351)
                      .++|++.+.||+|+||+||+|. +..+|+.||+|++...... ................|++++.+..++..++..++||
T Consensus         4 ~~~y~~~~~lg~G~~g~V~~~~-~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~   82 (317)
T 2pmi_A            4 SSQFKQLEKLGNGTYATVYKGL-NKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELKHENIVRLYDVIHTENKLTLVF   82 (317)
T ss_dssp             ---------------CEEEEEE-CSSSCCEEEEEEEECCSTTCSCHHHHHHHHHHTTCCBTTBCCEEEEECCTTEEEEEE
T ss_pred             ccceeEeeEECCCCCEEEEEEE-ECCCCcEEEEEEeecccccccHHHHHHHHHHHHhcCCCCcceEEEEEEECCeEEEEE
Confidence            4689999999999999999999 5778899999998654321 1112222223344557889999999988889999999


Q ss_pred             EecCCCCHHHHHHHHHhh--CCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeeccCCCCCccc
Q 018699          126 DYLSQGTLQDAINSYVVI--GKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSGPWQD  203 (351)
Q Consensus       126 e~~~~~sL~~~l~~~~~~--~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~~~~~~~~  203 (351)
                      ||++ ++|.+++......  ...+++..++.++.||+.||.|||++||+||||||+||+++                 .+
T Consensus        83 e~~~-~~L~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~ivH~Dlkp~NIl~~-----------------~~  144 (317)
T 2pmi_A           83 EFMD-NDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCHENKILHRDLKPQNLLIN-----------------KR  144 (317)
T ss_dssp             ECCC-CBHHHHHHHHHSSSCCCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEC-----------------TT
T ss_pred             EecC-CCHHHHHHhccccccccCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCChHHeEEc-----------------CC
Confidence            9996 6999998865311  13588999999999999999999999999999999999999                 77


Q ss_pred             CCeEEeecCCccccccCCCCccccccccCCCcccceeccC-CCCCccchHhHHHHHHHHHHhCccccccccCCC------
Q 018699          204 QGLCLVDWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQEK-KPWKFQVDTYGLCAIVHMMLHNSYMEIEKKASP------  276 (351)
Q Consensus       204 ~~~~l~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~~DiwslG~il~~l~~g~~p~~~~~~~~------  276 (351)
                      +.+||+|||++.....  .........+|+.|+|||++.+ ..++.++|||||||++|+|++|..||.......      
T Consensus       145 ~~~kl~Dfg~~~~~~~--~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~  222 (317)
T 2pmi_A          145 GQLKLGDFGLARAFGI--PVNTFSSEVVTLWYRAPDVLMGSRTYSTSIDIWSCGCILAEMITGKPLFPGTNDEEQLKLIF  222 (317)
T ss_dssp             CCEEECCCSSCEETTS--CCCCCCCCCSCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHH
T ss_pred             CCEEECcCccceecCC--CcccCCCCcccccccCchHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHH
Confidence            8899999999865431  1223345578999999999976 468999999999999999999999986432110      


Q ss_pred             -------CC-------------ceeeecCc--------chhhhhHHHHHHHHHHHHhcCCCCCChHHHHHHHHHHHHHH
Q 018699          277 -------DG-------------GLVYLPKL--------SFKRYWKVELWKSLFTNLLNMSSGNDKEVLQNLQKSFQDYL  327 (351)
Q Consensus       277 -------~~-------------~~~~~~~~--------~~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~~~~~~~~  327 (351)
                             ..             ........        ..+...+ ..+.+||.+||.+||++|||+.|+|+|||..-.
T Consensus       223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~l~~li~~~L~~dP~~Rpt~~e~l~hp~f~~~  300 (317)
T 2pmi_A          223 DIMGTPNESLWPSVTKLPKYNPNIQQRPPRDLRQVLQPHTKEPLD-GNLMDFLHGLLQLNPDMRLSAKQALHHPWFAEY  300 (317)
T ss_dssp             HHHCSCCTTTCGGGGGCTTCCTTCCCCCCCCSHHHHGGGCSSCCC-HHHHHHHHHHSCSSGGGSCCHHHHTTSGGGGGG
T ss_pred             HHhCCCChhHhhhhhhhhhcccccccccchhHHHhhcccccccCC-HHHHHHHHHHCCCCcccCCCHHHHhCChhhhcc
Confidence                   00             00000000        0011223 789999999999999999999999999875543

>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B

Probab=100.00  E-value=1.3e-43  Score=339.22  Aligned_cols=259  Identities=18%  Similarity=0.187  Sum_probs=204.2

Q ss_pred             EcCeeEEEEEEeeccCceEEEEEEecCCCCceEEEEecCCCCCh---HHHHHHHHHhhhccccccccccceeeecccCee
Q 018699           45 IGGKKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFPW---EFYMYRQLDQRISGRERSSFGFAHRIHLYSDYS  121 (351)
Q Consensus        45 i~~~~Y~i~~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~~~---e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  121 (351)
                      +..++|++.+.||+|+||+||+|+ +..+|+.||+|++.+....   ...........+....|++++.+...+...+.+
T Consensus       182 ~~~~~f~~~~~LG~G~fG~Vy~a~-~~~tg~~vAiK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l  260 (543)
T 3c4z_A          182 MGEDWFLDFRVLGRGGFGEVFACQ-MKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAYAFETKTDL  260 (543)
T ss_dssp             CCGGGEEEEEEEEECSSSEEEEEE-ETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEE
T ss_pred             CChhheEEEEEEeeCCCeEEEEEE-ECCCCcEEEEEEEEhHHhhhhHHHHHHHHHHHHHHhcCCCCEeeEEEEEeeCCEE
Confidence            345789999999999999999999 5678999999998643211   111111122223345688888888888888999


Q ss_pred             EEEEEecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeeccCCCCCc
Q 018699          122 ILVCDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSGPW  201 (351)
Q Consensus       122 ~lv~e~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~~~~~~  201 (351)
                      |+||||++||+|.+++......+..+++..++.++.||+.||.|||++||+||||||+||+++                 
T Consensus       261 ~lVmE~~~gg~L~~~l~~~~~~~~~l~e~~~~~~~~qi~~aL~~LH~~gIvHrDLKP~NILl~-----------------  323 (543)
T 3c4z_A          261 CLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQRNIIYRDLKPENVLLD-----------------  323 (543)
T ss_dssp             EEEECCCTTCBHHHHHHTSSTTSCSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEC-----------------
T ss_pred             EEEEEeccCCCHHHHHHHhhcccccccHHHHHHHHHHHHHHHHHHHHcCCcccCCChHHEEEe-----------------
Confidence            999999999999999876432235799999999999999999999999999999999999999                 


Q ss_pred             ccCCeEEeecCCccccccCCCCccccccccCCCcccceeccCCCCCccchHhHHHHHHHHHHhCccccccccCCCCCc--
Q 018699          202 QDQGLCLVDWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQEKKPWKFQVDTYGLCAIVHMMLHNSYMEIEKKASPDGG--  279 (351)
Q Consensus       202 ~~~~~~l~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~p~~~~~~~~~~~--  279 (351)
                      .++.+||+|||++.....  ........+||+.|+|||++.+..++.++|||||||++|+|++|..||..........  
T Consensus       324 ~~g~vkL~DFGla~~~~~--~~~~~~~~~GT~~Y~APE~l~~~~~~~~~DiwSlGvilyelltG~~PF~~~~~~~~~~~~  401 (543)
T 3c4z_A          324 DDGNVRISDLGLAVELKA--GQTKTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKEL  401 (543)
T ss_dssp             TTSCEEECCCTTCEECCT--TCCCBCCCCSCTTTSCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCTTCCCCHHHH
T ss_pred             CCCCEEEeecceeeeccC--CCcccccccCCccccChhhhcCCCCChHHhcCcchHHHHHHHhCCCCCCCCccchhHHHH
Confidence            788899999999975432  1222344589999999999999999999999999999999999999998654321100  


Q ss_pred             --eeeecCcchhhhhHHHHHHHHHHHHhcCCCCCChH-----HHHHHHHHHH
Q 018699          280 --LVYLPKLSFKRYWKVELWKSLFTNLLNMSSGNDKE-----VLQNLQKSFQ  324 (351)
Q Consensus       280 --~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~s-----~~e~l~~~~~  324 (351)
                        .+......+|..++ ..+.+||.+||.+||.+||+     +.+++.|||.
T Consensus       402 ~~~i~~~~~~~p~~~s-~~~~~li~~lL~~dP~~R~~~~~~~a~ei~~Hpff  452 (543)
T 3c4z_A          402 KQRVLEQAVTYPDKFS-PASKDFCEALLQKDPEKRLGFRDGSCDGLRTHPLF  452 (543)
T ss_dssp             HHHHHHCCCCCCTTSC-HHHHHHHHHHSCSSGGGSCCCBTTBSHHHHTSGGG
T ss_pred             HHHHhhcccCCCcccC-HHHHHHHHHhccCCHhHCCCCcccCHHHHHcCccc
Confidence              01122334445555 88999999999999999995     5889999864

>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii}

Probab=100.00  E-value=4.8e-43  Score=331.71  Aligned_cols=255  Identities=16%  Similarity=0.200  Sum_probs=178.7

Q ss_pred             CeeEEEEEEeeccCceEEEEEEecCCCCceEEEEecCCCCChHHHH--HHHHHhhhccccccccccceeeecc-----cC
Q 018699           47 GKKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFPWEFYM--YRQLDQRISGRERSSFGFAHRIHLY-----SD  119 (351)
Q Consensus        47 ~~~Y~i~~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~~~e~~~--~~~~~~~~~~~~~~~~~~~~~~~~~-----~~  119 (351)
                      .++|++.+.||+|+||+||+|+ +..+++.||||++..........  +......+....|++++.+..++..     ..
T Consensus        52 ~~~y~~~~~lG~G~~g~V~~~~-~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~  130 (458)
T 3rp9_A           52 PDRYEIRHLIGTGSYGHVCEAY-DKLEKRVVAIKKILRVFEDLIDCKRILREIAILNRLNHDHVVKVLDIVIPKDVEKFD  130 (458)
T ss_dssp             CTTEEECCC-------CEEEEE-ECC--CEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCC
T ss_pred             CCCeEEeeEeeecCCeEEEEEE-ECCCCcEEEEEEechhhcCHHHHHHHHHHHHHHHhCCCCCCCceEEEEecCCcccCc
Confidence            4789999999999999999999 57789999999987654433222  1122223344568888888877633     35


Q ss_pred             eeEEEEEecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeeccCCCC
Q 018699          120 YSILVCDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSG  199 (351)
Q Consensus       120 ~~~lv~e~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~~~~  199 (351)
                      .+|+||||+ +++|.+++..    +..+++..++.++.||+.||+|||++||+||||||+||+++               
T Consensus       131 ~~~lv~e~~-~~~L~~~~~~----~~~l~~~~~~~~~~qi~~aL~~LH~~~iiHrDlKp~NILl~---------------  190 (458)
T 3rp9_A          131 ELYVVLEIA-DSDFKKLFRT----PVYLTELHIKTLLYNLLVGVKYVHSAGILHRDLKPANCLVN---------------  190 (458)
T ss_dssp             CEEEEECCC-SEEHHHHHHS----SCCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEEC---------------
T ss_pred             eEEEEEecc-ccchhhhccc----CCCCCHHHHHHHHHHHHHHHHHHHhCCcCCCCCChhhEEEC---------------
Confidence            789999998 7799999876    56799999999999999999999999999999999999999               


Q ss_pred             CcccCCeEEeecCCccccccCCCC-------------------------ccccccccCCCcccceec-cCCCCCccchHh
Q 018699          200 PWQDQGLCLVDWGRGIDLHLFPDN-------------------------MEFEGDCRTSGFRCIEMQ-EKKPWKFQVDTY  253 (351)
Q Consensus       200 ~~~~~~~~l~Dfg~a~~~~~~~~~-------------------------~~~~~~~g~~~y~aPE~~-~~~~~~~~~Diw  253 (351)
                        .++.+||+|||++.........                         ......+||+.|+|||++ .+..++.++|||
T Consensus       191 --~~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~Diw  268 (458)
T 3rp9_A          191 --QDCSVKVCDFGLARTVDYPENGNSQLPISPREDDMNLVTFPHTKNLKRQLTGHVVTRWYRAPELILLQENYTEAIDVW  268 (458)
T ss_dssp             --TTCCEEECCCTTCBCTTSCTTCCCCCC---------------------------CCCTTCCHHHHTTCCCCCTHHHHH
T ss_pred             --CCCCEeecccccchhccCccccccccccCccccccccccccccccccccccCCcccccccChHHhhCCCCCCcHhHHH
Confidence              7788999999999754321111                         123456789999999986 567799999999


Q ss_pred             HHHHHHHHHHh-----------CccccccccCCC-------CCce-----------------------------------
Q 018699          254 GLCAIVHMMLH-----------NSYMEIEKKASP-------DGGL-----------------------------------  280 (351)
Q Consensus       254 slG~il~~l~~-----------g~~p~~~~~~~~-------~~~~-----------------------------------  280 (351)
                      ||||++|+|++           |.++|.......       ...+                                   
T Consensus       269 SlG~il~elltg~~~~~~~~~~~~p~f~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~~g~p~~~~~~~~~~~~~~  348 (458)
T 3rp9_A          269 SIGCIFAELLNMIKENVAYHADRGPLFPGSSCFPLSPDQKAGNDFKFHTRGNRDQLNVIFNILGTPSEEDIEALEKEDAK  348 (458)
T ss_dssp             HHHHHHHHHHTTSTTTCSSGGGCCCSCC--------------------CHHHHHHHHHHHHHHCCCCHHHHHTSSCHHHH
T ss_pred             HHHHHHHHHHHhccccccccccccccCCCCccccccccccccccccccccCCHHHHHHHHHHcCCCCHHHHhhcCCHHHH
Confidence            99999999999           444443322100       0000                                   


Q ss_pred             ------eeecCcchh---hhhHHHHHHHHHHHHhcCCCCCChHHHHHHHHHHHH
Q 018699          281 ------VYLPKLSFK---RYWKVELWKSLFTNLLNMSSGNDKEVLQNLQKSFQD  325 (351)
Q Consensus       281 ------~~~~~~~~~---~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~~~~~~  325 (351)
                            .......+.   ...+ +.+.+||.+||..||++|||+.|+|+|||..
T Consensus       349 ~~~~~~~~~~~~~~~~~~~~~s-~~~~dLl~~mL~~dP~~R~t~~e~L~Hp~f~  401 (458)
T 3rp9_A          349 RYIRIFPKREGTDLAERFPASS-ADAIHLLKRMLVFNPNKRITINECLAHPFFK  401 (458)
T ss_dssp             HHHTTSCCCCCCCGGGGSTTSC-HHHHHHHHHHSCSSTTTSCCHHHHHHSGGGT
T ss_pred             HHHHhcCCCCCCCHHHHCCCCC-HHHHHHHHHHhccCccccCCHHHHhcCHhhh
Confidence                  000000011   1113 7889999999999999999999999999744

>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II}

Probab=100.00  E-value=1.3e-43  Score=323.41  Aligned_cols=264  Identities=20%  Similarity=0.257  Sum_probs=195.8

Q ss_pred             cCeeEEEEEEeeccCceEEEEEEecCCCCceEEEEecCCC-----CChHHHHHHHHHhhhccccccccccceeeecccCe
Q 018699           46 GGKKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPA-----FPWEFYMYRQLDQRISGRERSSFGFAHRIHLYSDY  120 (351)
Q Consensus        46 ~~~~Y~i~~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~-----~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  120 (351)
                      ..++|++.+.||+|+||+||+|. +..+++.||+|++...     .......+...........|++++.+..++...+.
T Consensus        24 ~~~~y~~~~~lG~G~~g~V~~~~-~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~  102 (345)
T 3hko_A           24 LQKKYHLKGAIGQGSYGVVRVAI-ENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLHHPNIARLYEVYEDEQY  102 (345)
T ss_dssp             HHHHEEEEEEEEECSSCEEEEEE-ETTTCCEEEEEEEEHHHHHC---CHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSE
T ss_pred             hhhheeecceeeecCCeEEEEEE-ECCCCceEEEeehhhhhhcccCHHHHHHHHHHHHHHHhCCCCCcceeehhhccCCe
Confidence            35899999999999999999999 5778899999987532     11222222222233344568899999999888999


Q ss_pred             eEEEEEecCCCCHHHHHHHHHh------------------------------------hCCChhHHHHHHHHHHHHHHHH
Q 018699          121 SILVCDYLSQGTLQDAINSYVV------------------------------------IGKSMEEVLCIYYTIEMLCILE  164 (351)
Q Consensus       121 ~~lv~e~~~~~sL~~~l~~~~~------------------------------------~~~~l~~~~~~~i~~qi~~~l~  164 (351)
                      .++||||+++++|.+++.....                                    .+..+++..++.++.||+.||.
T Consensus       103 ~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~  182 (345)
T 3hko_A          103 ICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEEAINGSIHGFRESLDFVQREKLISNIMRQIFSALH  182 (345)
T ss_dssp             EEEEEECCCSCBHHHHEEEEEETTTTEEEEEEECCCCCCSHHHHHHHHHSCC--CEEECCHHHHHHHHHHHHHHHHHHHH
T ss_pred             EEEEEeCCCCCcHHHHHHHhhcccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHH
Confidence            9999999999999998852100                                    0123578889999999999999


Q ss_pred             HHHHCCceecCCCCCcEEEeecCCcceeeccCCCCCcccCCeEEeecCCccccccCCCCc--cccccccCCCcccceecc
Q 018699          165 SLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSGPWQDQGLCLVDWGRGIDLHLFPDNM--EFEGDCRTSGFRCIEMQE  242 (351)
Q Consensus       165 ~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~~~~~~~~~~~~l~Dfg~a~~~~~~~~~~--~~~~~~g~~~y~aPE~~~  242 (351)
                      |||++||+|+||||+||+++.+               ..+.++|+|||++..........  ......||+.|+|||++.
T Consensus       183 ~LH~~~ivH~Dlkp~NIll~~~---------------~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~  247 (345)
T 3hko_A          183 YLHNQGICHRDIKPENFLFSTN---------------KSFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLN  247 (345)
T ss_dssp             HHHHTTEECCCCCGGGEEESCS---------------SSCCEEECCCTTCEEGGGTTCC--------CCCGGGCCHHHHT
T ss_pred             HHHHCCccccCCChhhEEEecC---------------CCceEEEeeccccccccccCccccccccccCCCccccCchhhc
Confidence            9999999999999999999832               12379999999987543322221  234567899999999986


Q ss_pred             C--CCCCccchHhHHHHHHHHHHhCccccccccCCCCCceee----ecCcchhhhhHHHHHHHHHHHHhcCCCCCChHHH
Q 018699          243 K--KPWKFQVDTYGLCAIVHMMLHNSYMEIEKKASPDGGLVY----LPKLSFKRYWKVELWKSLFTNLLNMSSGNDKEVL  316 (351)
Q Consensus       243 ~--~~~~~~~DiwslG~il~~l~~g~~p~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~  316 (351)
                      +  ..++.++|||||||++|+|++|..||.............    ....+....++ +.+.+||.+||++||.+||++.
T Consensus       248 ~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~li~~~l~~~p~~Rps~~  326 (345)
T 3hko_A          248 TTNESYGPKCDAWSAGVLLHLLLMGAVPFPGVNDADTISQVLNKKLCFENPNYNVLS-PLARDLLSNLLNRNVDERFDAM  326 (345)
T ss_dssp             CSSSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCTTSGGGGGSC-HHHHHHHHHHSCSCTTTSCCHH
T ss_pred             cCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCChHHHHHHHHhcccccCCcccccCC-HHHHHHHHHHcCCChhHCCCHH
Confidence            5  678899999999999999999999996543221100000    01111112234 7899999999999999999999


Q ss_pred             HHHHHHHHHH
Q 018699          317 QNLQKSFQDY  326 (351)
Q Consensus       317 e~l~~~~~~~  326 (351)
                      ++++|||..-
T Consensus       327 ~~l~hp~~~~  336 (345)
T 3hko_A          327 RALQHPWISQ  336 (345)
T ss_dssp             HHHHSHHHHT
T ss_pred             HHhcChhhcc
Confidence            9999997654

>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A*

Probab=100.00  E-value=2.8e-43  Score=316.47  Aligned_cols=261  Identities=14%  Similarity=0.105  Sum_probs=192.9

Q ss_pred             CCcceEEEEcCeeEEEEEEeeccCceEEEEEEecCCCCceEEEEecCCCCChHH--HHHHHHHhhhccccccccccceee
Q 018699           37 SSRNKTIEIGGKKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFPWEF--YMYRQLDQRISGRERSSFGFAHRI  114 (351)
Q Consensus        37 ~~~~~~~~i~~~~Y~i~~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~~~e~--~~~~~~~~~~~~~~~~~~~~~~~~  114 (351)
                      ......+.+..++|++.+.||+|+||+||+|++   +|+.||+|++........  ..+...........|++++.+..+
T Consensus        26 ~~~~~~~~i~~~~y~i~~~lG~G~~g~V~~~~~---~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~  102 (309)
T 3p86_A           26 AMDGDDMDIPWCDLNIKEKIGAGSFGTVHRAEW---HGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGA  102 (309)
T ss_dssp             ------CBCCGGGEEEEEEEEECSSEEEEEEEE---TTEEEEEEEECCCCCSHHHHHHHHHHHHHHHHCCCTTBCCEEEE
T ss_pred             CCCcccccCChhHceeeeEeecCCCeEEEEEEE---CCCcEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEE
Confidence            344556678889999999999999999999984   478899999876543322  122222233444568899998888


Q ss_pred             ecccCeeEEEEEecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCC--ceecCCCCCcEEEeecCCccee
Q 018699          115 HLYSDYSILVCDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVG--IIHGDFKPDNLLIRYARDELTV  192 (351)
Q Consensus       115 ~~~~~~~~lv~e~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~--i~H~dl~p~Nill~~~~~~~~~  192 (351)
                      +...+..++||||+++++|.+++..... ...+++..++.++.|++.||+|||++|  |+||||||+||+++        
T Consensus       103 ~~~~~~~~lv~e~~~~~~L~~~l~~~~~-~~~~~~~~~~~i~~qi~~aL~~LH~~~~~ivH~Dikp~NIll~--------  173 (309)
T 3p86_A          103 VTQPPNLSIVTEYLSRGSLYRLLHKSGA-REQLDERRRLSMAYDVAKGMNYLHNRNPPIVHRNLKSPNLLVD--------  173 (309)
T ss_dssp             ECSTTCCEEEEECCTTCBHHHHHHSTTH-HHHSCHHHHHHHHHHHHHHHHHHHTSSSCCCCTTCCGGGEEEC--------
T ss_pred             EEECCceEEEEecCCCCcHHHHHhhcCC-CCCCCHHHHHHHHHHHHHHHHHHHcCCCCEECCCCChhhEEEe--------
Confidence            8888899999999999999999986311 123889999999999999999999999  99999999999999        


Q ss_pred             eccCCCCCcccCCeEEeecCCccccccCCCCccccccccCCCcccceeccCCCCCccchHhHHHHHHHHHHhCccccccc
Q 018699          193 LDHDRSGPWQDQGLCLVDWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQEKKPWKFQVDTYGLCAIVHMMLHNSYMEIEK  272 (351)
Q Consensus       193 ~~~~~~~~~~~~~~~l~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~p~~~~  272 (351)
                               .++.++|+|||++.....  .........||+.|+|||++.+..++.++|||||||++|+|++|..||...
T Consensus       174 ---------~~~~~kL~Dfg~a~~~~~--~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~Pf~~~  242 (309)
T 3p86_A          174 ---------KKYTVKVCDFGLSRLKAS--TFLSSKSAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPWGNL  242 (309)
T ss_dssp             ---------TTCCEEECCCC-------------------CCTTSCHHHHTTCCCCTTHHHHHHHHHHHHHHHCCCTTTTS
T ss_pred             ---------CCCcEEECCCCCCccccc--cccccccCCCCccccChhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCC
Confidence                     778899999999864221  112234457899999999999999999999999999999999999999754


Q ss_pred             cCCCCCce--eeecCcchhhhhHHHHHHHHHHHHhcCCCCCChHHHHHHHH
Q 018699          273 KASPDGGL--VYLPKLSFKRYWKVELWKSLFTNLLNMSSGNDKEVLQNLQK  321 (351)
Q Consensus       273 ~~~~~~~~--~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~~  321 (351)
                      ........  ........+..++ +.+.+||.+||..||.+||++.++++.
T Consensus       243 ~~~~~~~~~~~~~~~~~~~~~~~-~~l~~li~~~l~~dP~~Rps~~~ll~~  292 (309)
T 3p86_A          243 NPAQVVAAVGFKCKRLEIPRNLN-PQVAAIIEGCWTNEPWKRPSFATIMDL  292 (309)
T ss_dssp             CHHHHHHHHHHSCCCCCCCTTSC-HHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             CHHHHHHHHHhcCCCCCCCccCC-HHHHHHHHHHccCChhhCcCHHHHHHH
Confidence            32210000  0112233444455 789999999999999999999999863

>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*

Probab=100.00  E-value=4.1e-43  Score=335.12  Aligned_cols=256  Identities=18%  Similarity=0.136  Sum_probs=197.0

Q ss_pred             eeEEEEEEeeccCceEEEEEEecCCCCceEEEEecCCCCCh--HHHHHHHHHhhhccccccccccceeeecccCeeEEEE
Q 018699           48 KKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFPW--EFYMYRQLDQRISGRERSSFGFAHRIHLYSDYSILVC  125 (351)
Q Consensus        48 ~~Y~i~~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~~~--e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~  125 (351)
                      ++|++.+.||+|+||+||+|+ +..+++.||+|++.+....  ....+......+....|++++.+..++...+..|+||
T Consensus        37 ~~y~~~~~lG~G~~g~V~~~~-~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~  115 (494)
T 3lij_A           37 EMYQRVKKLGSGAYGEVLLCR-DKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDHPNIMKLYDFFEDKRNYYLVM  115 (494)
T ss_dssp             HHEEEEEEEECC---EEEEEE-ETTTCCEEEEEEEEC-----CTTHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             cCeEEeeEEecCCCEEEEEEE-ECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEE
Confidence            589999999999999999999 5778899999998754321  1222222333445567899999999998899999999


Q ss_pred             EecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeeccCCCCCcccCC
Q 018699          126 DYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSGPWQDQG  205 (351)
Q Consensus       126 e~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~~~~~~~~~~  205 (351)
                      ||+++++|.+.+...    ..+++..++.++.||+.||.|||++||+||||||+||+++..+              ..+.
T Consensus       116 e~~~~g~L~~~~~~~----~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~--------------~~~~  177 (494)
T 3lij_A          116 ECYKGGELFDEIIHR----MKFNEVDAAVIIKQVLSGVTYLHKHNIVHRDLKPENLLLESKE--------------KDAL  177 (494)
T ss_dssp             ECCCSCBHHHHHHHH----SSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEESCSS--------------TTCC
T ss_pred             ecCCCCcHHHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHHCCceeccCChhhEEEeCCC--------------CCCc
Confidence            999999999988773    6799999999999999999999999999999999999998432              3456


Q ss_pred             eEEeecCCccccccCCCCccccccccCCCcccceeccCCCCCccchHhHHHHHHHHHHhCccccccccCCCCCceee---
Q 018699          206 LCLVDWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQEKKPWKFQVDTYGLCAIVHMMLHNSYMEIEKKASPDGGLVY---  282 (351)
Q Consensus       206 ~~l~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~p~~~~~~~~~~~~~~---  282 (351)
                      ++|+|||++....   .........||+.|+|||++. ..++.++|||||||++|+|++|..||.............   
T Consensus       178 ~kl~DfG~a~~~~---~~~~~~~~~gt~~y~aPE~l~-~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~  253 (494)
T 3lij_A          178 IKIVDFGLSAVFE---NQKKMKERLGTAYYIAPEVLR-KKYDEKCDVWSIGVILFILLAGYPPFGGQTDQEILRKVEKGK  253 (494)
T ss_dssp             EEECCCTTCEECB---TTBCBCCCCSCTTTCCHHHHT-TCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTC
T ss_pred             EEEEECCCCeECC---CCccccccCCCcCeeCHHHHc-ccCCCchhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCC
Confidence            9999999986533   223345567999999999986 458999999999999999999999997544321000000   


Q ss_pred             -ecCcchhhhhHHHHHHHHHHHHhcCCCCCChHHHHHHHHHHHHHH
Q 018699          283 -LPKLSFKRYWKVELWKSLFTNLLNMSSGNDKEVLQNLQKSFQDYL  327 (351)
Q Consensus       283 -~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~~~~~~~~  327 (351)
                       ....+.....+ +.+++||.+||.+||.+|||+.|+|+|||..-.
T Consensus       254 ~~~~~~~~~~~s-~~~~~li~~~L~~dp~~R~s~~e~l~hp~~~~~  298 (494)
T 3lij_A          254 YTFDSPEWKNVS-EGAKDLIKQMLQFDSQRRISAQQALEHPWIKEM  298 (494)
T ss_dssp             CCCCSGGGTTSC-HHHHHHHHHHTCSSTTTSCCHHHHHTCHHHHHH
T ss_pred             CCCCchhcccCC-HHHHHHHHHHCCCChhhCccHHHHhcCcccccC
Confidence             01111111233 789999999999999999999999999986544

>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ...

Probab=100.00  E-value=2.7e-43  Score=323.27  Aligned_cols=258  Identities=16%  Similarity=0.116  Sum_probs=201.7

Q ss_pred             EEcCeeEEEEEEeeccCceEEEEEEecCCCCceEEEEecCCCCChH-HHHHHHHHhhhccccccccccceeeecccCeeE
Q 018699           44 EIGGKKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFPWE-FYMYRQLDQRISGRERSSFGFAHRIHLYSDYSI  122 (351)
Q Consensus        44 ~i~~~~Y~i~~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~~~e-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  122 (351)
                      .+..++|++.+.||+|+||+||+|. +..+++.||+|++....... ...+......+....|++++.+..++..++..+
T Consensus        29 ~~~~~~y~~~~~lg~G~~g~V~~~~-~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~  107 (360)
T 3eqc_A           29 ELKDDDFEKISELGAGNGGVVFKVS-HKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEIS  107 (360)
T ss_dssp             CCCGGGEEEEEEEEECSSCEEEEEE-ETTTCCEEEEEEEECCCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEETTEEE
T ss_pred             ccccccceeeeeecCCCCeEEEEEE-ECCCCcEEEEEEeccccCHHHHHHHHHHHHHHHHCCCCCEEEEeEEEEECCEEE
Confidence            4557899999999999999999999 56788999999987664332 222233333445567889999888888889999


Q ss_pred             EEEEecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHC-CceecCCCCCcEEEeecCCcceeeccCCCCCc
Q 018699          123 LVCDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDV-GIIHGDFKPDNLLIRYARDELTVLDHDRSGPW  201 (351)
Q Consensus       123 lv~e~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~-~i~H~dl~p~Nill~~~~~~~~~~~~~~~~~~  201 (351)
                      +||||+++++|.+++...    ..+++..+..++.|++.|+.|||+. ||+|+||||+||+++                 
T Consensus       108 lv~e~~~~~~L~~~l~~~----~~~~~~~~~~i~~~i~~~l~~lh~~~~i~H~dlkp~Nil~~-----------------  166 (360)
T 3eqc_A          108 ICMEHMDGGSLDQVLKKA----GRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVN-----------------  166 (360)
T ss_dssp             EEECCCTTCBHHHHHHHH----SSCCHHHHHHHHHHHHHHHHHHHHHHCCCCSCCSGGGEEEC-----------------
T ss_pred             EEEECCCCCCHHHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHHhCCEEcCCccHHHEEEC-----------------
Confidence            999999999999999874    5799999999999999999999996 999999999999999                 


Q ss_pred             ccCCeEEeecCCccccccCCCCccccccccCCCcccceeccCCCCCccchHhHHHHHHHHHHhCccccccccCCCC----
Q 018699          202 QDQGLCLVDWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQEKKPWKFQVDTYGLCAIVHMMLHNSYMEIEKKASPD----  277 (351)
Q Consensus       202 ~~~~~~l~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~p~~~~~~~~~----  277 (351)
                      .++.++|+|||++.....    .......||+.|+|||++.+..++.++|||||||++|+|++|..||........    
T Consensus       167 ~~~~~kl~Dfg~~~~~~~----~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~  242 (360)
T 3eqc_A          167 SRGEIKLCDFGVSGQLID----SMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMF  242 (360)
T ss_dssp             TTCCEEECCCCCCHHHHH----HC----CCCCTTCCHHHHTTCCCSHHHHHHHHHHHHHHHHHTSCCSSCCCHHHHHHHH
T ss_pred             CCCCEEEEECCCCccccc----ccccCCCCCCCeECHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHh
Confidence            778899999998864321    122345789999999999999999999999999999999999999864321100    


Q ss_pred             -----Cc-----------------e-----------------eeecCcchh-hhhHHHHHHHHHHHHhcCCCCCChHHHH
Q 018699          278 -----GG-----------------L-----------------VYLPKLSFK-RYWKVELWKSLFTNLLNMSSGNDKEVLQ  317 (351)
Q Consensus       278 -----~~-----------------~-----------------~~~~~~~~~-~~~~~~~~~~li~~~L~~dP~~R~s~~e  317 (351)
                           +.                 +                 ........+ ..++ ..+.+||.+||+.||++|||+.|
T Consensus       243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~li~~~L~~dP~~Rpt~~e  321 (360)
T 3eqc_A          243 GCQVEGDAAETPPRPRTPGRPLNKFGMDSRPPMAIFELLDYIVNEPPPKLPSGVFS-LEFQDFVNKCLIKNPAERADLKQ  321 (360)
T ss_dssp             C------------------------------CCCHHHHHHHHHHSCCCCCCTTTSC-HHHHHHHHHHHCSSTTTSCCHHH
T ss_pred             cccccccCCCCCCCcccCCCcccccccCCCCcccchhhhhHHhccCCCCCCccccc-HHHHHHHHHHhhcChhhCCCHHH
Confidence                 00                 0                 000001111 1123 68999999999999999999999


Q ss_pred             HHHHHHHHHHh
Q 018699          318 NLQKSFQDYLC  328 (351)
Q Consensus       318 ~l~~~~~~~~~  328 (351)
                      +|+|||..-..
T Consensus       322 ll~hp~~~~~~  332 (360)
T 3eqc_A          322 LMVHAFIKRSD  332 (360)
T ss_dssp             HHTSHHHHHHH
T ss_pred             HhhChHhhcch
Confidence            99999855433

>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A*

Probab=100.00  E-value=1.6e-43  Score=331.80  Aligned_cols=251  Identities=20%  Similarity=0.291  Sum_probs=191.7

Q ss_pred             CeeEEEEEEeeccCceEEEEEEecCCCCceEEEEecCCCCCh------HHHHHHHHHhhhccccccccccceeeecccCe
Q 018699           47 GKKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFPW------EFYMYRQLDQRISGRERSSFGFAHRIHLYSDY  120 (351)
Q Consensus        47 ~~~Y~i~~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~~~------e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  120 (351)
                      ..+|++.+.||+|+||+||+|. +..+++.||||++......      |...++.+.+. ....+++++.....+...+.
T Consensus        96 ~~ry~~~~~LG~G~fg~V~~a~-~~~~~~~vAvK~~~~~~~~~~~~~~E~~~l~~l~~~-~~~~~~~iv~~~~~~~~~~~  173 (429)
T 3kvw_A           96 AYRYEVLKVIGKGSFGQVVKAY-DHKVHQHVALKMVRNEKRFHRQAAEEIRILEHLRKQ-DKDNTMNVIHMLENFTFRNH  173 (429)
T ss_dssp             TTTEEEEEEEEESSSEEEEEEE-ETTTTEEEEEEEECSCHHHHHHHHHHHHHHHHHHTT-CTTSCSCBCCEEEEEEETTE
T ss_pred             cCcEEEEEEcccCccEEEEEEE-ECCCCcEEEEEEECCccchHHHHHHHHHHHHHHhhc-cccCCcCEEEEEeecccCCe
Confidence            5789999999999999999999 5778899999998764321      22222222221 22345677777777777899


Q ss_pred             eEEEEEecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeeccCCCCC
Q 018699          121 SILVCDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSGP  200 (351)
Q Consensus       121 ~~lv~e~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~~~~~  200 (351)
                      .++||||+ +++|.+++....  ...+++..++.++.||+.||+|||++||+||||||+||+++                
T Consensus       174 ~~lv~e~~-~~~L~~~l~~~~--~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlKp~NILl~----------------  234 (429)
T 3kvw_A          174 ICMTFELL-SMNLYELIKKNK--FQGFSLPLVRKFAHSILQCLDALHKNRIIHCDLKPENILLK----------------  234 (429)
T ss_dssp             EEEEECCC-CCBHHHHHHHTT--TCCCCHHHHHHHHHHHHHHHHHHHHHTEECSCCSGGGEEES----------------
T ss_pred             EEEEEecc-CCCHHHHHHhcc--CCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEEc----------------
Confidence            99999999 579999988742  24589999999999999999999999999999999999999                


Q ss_pred             cccCC--eEEeecCCccccccCCCCccccccccCCCcccceeccCCCCCccchHhHHHHHHHHHHhCccccccccCCCC-
Q 018699          201 WQDQG--LCLVDWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQEKKPWKFQVDTYGLCAIVHMMLHNSYMEIEKKASPD-  277 (351)
Q Consensus       201 ~~~~~--~~l~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~p~~~~~~~~~-  277 (351)
                       .++.  ++|+|||++....     .......||+.|+|||++.+..++.++|||||||++|+|++|.+||........ 
T Consensus       235 -~~~~~~vkL~DFG~a~~~~-----~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~pf~~~~~~~~l  308 (429)
T 3kvw_A          235 -QQGRSGIKVIDFGSSCYEH-----QRVYTYIQSRFYRAPEVILGARYGMPIDMWSLGCILAELLTGYPLLPGEDEGDQL  308 (429)
T ss_dssp             -STTSCCEEECCCTTCEETT-----CCCCSSCSCGGGCCHHHHHTBCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHH
T ss_pred             -cCCCcceEEeecccceecC-----CcccccCCCCCccChHHHhCCCCCchHHHHhHHHHHHHHHhCCCCCCCCCHHHHH
Confidence             4444  9999999986432     223456789999999999999999999999999999999999999864331100 


Q ss_pred             -----------------------------------------Cceee---------ecCcchhhhhH-------HHHHHHH
Q 018699          278 -----------------------------------------GGLVY---------LPKLSFKRYWK-------VELWKSL  300 (351)
Q Consensus       278 -----------------------------------------~~~~~---------~~~~~~~~~~~-------~~~~~~l  300 (351)
                                                               +....         ....+....|.       ++.+.+|
T Consensus       309 ~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~dl  388 (429)
T 3kvw_A          309 ACMIELLGMPSQKLLDASKRAKNFVSSKGYPRYCTVTTLSDGSVVLNGGRSRRGKLRGPPESREWGNALKGCDDPLFLDF  388 (429)
T ss_dssp             HHHHHHHCCCCHHHHHTBTTHHHHBCTTSCBTTSCEECCCC--CEECCEECTTCCEECSTTCSCHHHHTTTCCCHHHHHH
T ss_pred             HHHHHHcCCCCHHHHHhhhhhhhccCCCCCcccccccccccccccccccccchhhccCCccchhhHhhccccchHHHHHH
Confidence                                                     00000         00000011111       1678999


Q ss_pred             HHHHhcCCCCCChHHHHHHHHHHH
Q 018699          301 FTNLLNMSSGNDKEVLQNLQKSFQ  324 (351)
Q Consensus       301 i~~~L~~dP~~R~s~~e~l~~~~~  324 (351)
                      |.+||++||++|||+.|+|+|||.
T Consensus       389 i~~~L~~dP~~Rpta~e~L~Hpw~  412 (429)
T 3kvw_A          389 LKQCLEWDPAVRMTPGQALRHPWL  412 (429)
T ss_dssp             HHHHTCSSTTTSCCHHHHHTSTTT
T ss_pred             HHHHCCCChhhCCCHHHHhCChhh
Confidence            999999999999999999999874

>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens}

Probab=100.00  E-value=1.5e-43  Score=320.41  Aligned_cols=254  Identities=20%  Similarity=0.223  Sum_probs=188.0

Q ss_pred             eeEEEEEEeeccCceEEEEEEecCCCCceEEEEecCCCCChHH--HHHHHHHhhhccccccccccceeeecccCeeEEEE
Q 018699           48 KKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFPWEF--YMYRQLDQRISGRERSSFGFAHRIHLYSDYSILVC  125 (351)
Q Consensus        48 ~~Y~i~~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~~~e~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~  125 (351)
                      ++|++.+.||+|+||+||+|+ +..+++.||+|++........  ...++ ...+....+++++.+..++..++..++||
T Consensus         2 ~~y~~~~~lG~G~~g~V~~~~-~~~~~~~vavK~~~~~~~~~~~~~~~~E-~~~l~~l~h~~iv~~~~~~~~~~~~~lv~   79 (324)
T 3mtl_A            2 ETYIKLDKLGEGTYATVYKGK-SKLTDNLVALKEIRLEHEEGAPCTAIRE-VSLLKDLKHANIVTLHDIIHTEKSLTLVF   79 (324)
T ss_dssp             CSEEEEEEEEECSSEEEEEEE-ETTTCCEEEEEEECC------CCCCCCC-HHHHSCCCCTTBCCEEEEEECSSCEEEEE
T ss_pred             CceEEEEEEcCCCCEEEEEEE-ECCCCcEEEEEEEecccccccchhHHHH-HHHHHhcCCCCCCeeeeEEeeCCEEEEEe
Confidence            579999999999999999999 567889999999864322110  00011 12223445788888888888889999999


Q ss_pred             EecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeeccCCCCCcccCC
Q 018699          126 DYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSGPWQDQG  205 (351)
Q Consensus       126 e~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~~~~~~~~~~  205 (351)
                      ||+. ++|.+++...   +..+++..++.++.|++.||.|||++||+||||||+||+++                 .++.
T Consensus        80 e~~~-~~l~~~~~~~---~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~Dikp~NIl~~-----------------~~~~  138 (324)
T 3mtl_A           80 EYLD-KDLKQYLDDC---GNIINMHNVKLFLFQLLRGLAYCHRQKVLHRDLKPQNLLIN-----------------ERGE  138 (324)
T ss_dssp             ECCS-EEHHHHHHHT---TTCCCHHHHHHHHHHHHHHHHHHHHTTEEESSCCGGGEEEC-----------------TTCC
T ss_pred             cccc-cCHHHHHHhc---CCCCCHHHHHHHHHHHHHHHHHHHHCCccCCCcCHHHEEEC-----------------CCCC
Confidence            9995 6999988774   46789999999999999999999999999999999999999                 7788


Q ss_pred             eEEeecCCccccccCCCCccccccccCCCcccceeccC-CCCCccchHhHHHHHHHHHHhCccccccccCCCC-------
Q 018699          206 LCLVDWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQEK-KPWKFQVDTYGLCAIVHMMLHNSYMEIEKKASPD-------  277 (351)
Q Consensus       206 ~~l~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~~DiwslG~il~~l~~g~~p~~~~~~~~~-------  277 (351)
                      ++|+|||++.....  .........+|+.|+|||++.+ ..++.++|||||||++|+|++|..||........       
T Consensus       139 ~kl~Dfg~a~~~~~--~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~  216 (324)
T 3mtl_A          139 LKLADFGLARAKSI--PTKTYDNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMATGRPLFPGSTVEEQLHFIFRI  216 (324)
T ss_dssp             EEECSSSEEECC--------------CGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHH
T ss_pred             EEEccCcccccccC--CccccccccCcccccChhhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHH
Confidence            99999999864321  2223345578999999999876 5688999999999999999999999965432100       


Q ss_pred             ------Cce-----------------eeecCcchhhhhHHHHHHHHHHHHhcCCCCCChHHHHHHHHHHHHHH
Q 018699          278 ------GGL-----------------VYLPKLSFKRYWKVELWKSLFTNLLNMSSGNDKEVLQNLQKSFQDYL  327 (351)
Q Consensus       278 ------~~~-----------------~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~~~~~~~~  327 (351)
                            ..+                 ............+ +.+.+||.+||+.||.+|||+.|+|+|||..-+
T Consensus       217 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~li~~~L~~dP~~R~t~~e~l~hp~f~~~  288 (324)
T 3mtl_A          217 LGTPTEETWPGILSNEEFKTYNYPKYRAEALLSHAPRLD-SDGADLLTKLLQFEGRNRISAEDAMKHPFFLSL  288 (324)
T ss_dssp             HCCCCTTTSTTGGGCHHHHHTCCCCCCCCCHHHHCTTSC-HHHHHHHHHHSCSSGGGSCCHHHHTTSGGGGGG
T ss_pred             hCCCChHhchhhhcchhhcccccccccchhhhhhcCCCC-HHHHHHHHHHcCcCcccCCCHHHHhcChhhhhc
Confidence                  000                 0000000111123 678999999999999999999999999975433

>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*

Probab=100.00  E-value=8.6e-44  Score=318.50  Aligned_cols=273  Identities=18%  Similarity=0.188  Sum_probs=205.3

Q ss_pred             cCeeEEEEEEeeccCceEEEEEEecCCCCceEEEEecCCCCChHHHHHHHHHhhhccccccccccceeeecccCeeEEEE
Q 018699           46 GGKKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFPWEFYMYRQLDQRISGRERSSFGFAHRIHLYSDYSILVC  125 (351)
Q Consensus        46 ~~~~Y~i~~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~  125 (351)
                      ..++|++.+.||+|+||+||+|. +..+++.||+|++..........+...........|++++.+..+....+..++||
T Consensus        17 ~~~~y~i~~~lg~G~~g~V~~~~-~~~~~~~~aiK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~   95 (302)
T 2j7t_A           17 PNEVWEIVGELGDGAFGKVYKAK-NKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYYHDGKLWIMI   95 (302)
T ss_dssp             GGGTEEEEEEEECSTTCCEEEEE-ETTTCCEEEEEEEC----CCHHHHHHHHHHHHHCCCTTBCCEEEEEECC-CEEEEE
T ss_pred             CccceeecceeccCCCeEEEEEE-EcCCCcEEEEEEecCCCHHHHHHHHHHHHHHhcCCCCCEeeeeeeeeeCCeEEEEE
Confidence            35789999999999999999999 56778999999987554333222222223334456888888888888888999999


Q ss_pred             EecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeeccCCCCCcccCC
Q 018699          126 DYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSGPWQDQG  205 (351)
Q Consensus       126 e~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~~~~~~~~~~  205 (351)
                      ||+++++|.+++...   +..+++..++.++.|++.|+.|||++|++|+||+|+||+++                 .++.
T Consensus        96 e~~~~~~l~~~~~~~---~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~Nil~~-----------------~~~~  155 (302)
T 2j7t_A           96 EFCPGGAVDAIMLEL---DRGLTEPQIQVVCRQMLEALNFLHSKRIIHRDLKAGNVLMT-----------------LEGD  155 (302)
T ss_dssp             ECCTTEEHHHHHHHH---TSCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEEC-----------------TTSC
T ss_pred             EeCCCCcHHHHHHhh---ccCCCHHHHHHHHHHHHHHHHHHhcCCcccCCCCHHHEEEC-----------------CCCC
Confidence            999999999998765   56799999999999999999999999999999999999999                 6778


Q ss_pred             eEEeecCCccccccCCCCccccccccCCCcccceec-----cCCCCCccchHhHHHHHHHHHHhCccccccccCCCCCc-
Q 018699          206 LCLVDWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQ-----EKKPWKFQVDTYGLCAIVHMMLHNSYMEIEKKASPDGG-  279 (351)
Q Consensus       206 ~~l~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~-----~~~~~~~~~DiwslG~il~~l~~g~~p~~~~~~~~~~~-  279 (351)
                      ++|+|||++......  ........|++.|+|||++     .+..++.++||||||+++|+|++|..||.......... 
T Consensus       156 ~kl~Dfg~~~~~~~~--~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~  233 (302)
T 2j7t_A          156 IRLADFGVSAKNLKT--LQKRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVLLK  233 (302)
T ss_dssp             EEECCCHHHHHHHHH--HHC-----CCGGGCCHHHHHHHHTTSTTTTTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHH
T ss_pred             EEEEECCCCcccccc--ccccccccCChhhcCCeeeccccCCCCCCchhhhHHHHHHHHHHHhcCCCCCccCCHHHHHHH
Confidence            999999986432110  1112334689999999998     46678899999999999999999999987543210000 


Q ss_pred             e--eeecCcchhhhhHHHHHHHHHHHHhcCCCCCChHHHHHHHHHHHHHHhhChHHHHHHHHHHH
Q 018699          280 L--VYLPKLSFKRYWKVELWKSLFTNLLNMSSGNDKEVLQNLQKSFQDYLCSNPQLLKNLKELLA  342 (351)
Q Consensus       280 ~--~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~~~~~~~~~~~~~~~~~~~~~~~  342 (351)
                      .  ...+....+..++ ..+.+||.+||..||++||++.++++|||..-...+..+...+.+.-+
T Consensus       234 ~~~~~~~~~~~~~~~~-~~l~~li~~~l~~dp~~Rps~~~ll~h~~~~~~~~~~~~~~~~~~~~~  297 (302)
T 2j7t_A          234 IAKSDPPTLLTPSKWS-VEFRDFLKIALDKNPETRPSAAQLLEHPFVSSITSNKALRELVAEAKA  297 (302)
T ss_dssp             HHHSCCCCCSSGGGSC-HHHHHHHHHHSCSCTTTSCCHHHHTTSTTTTTCCCCHHHHHHHHHHHH
T ss_pred             HhccCCcccCCccccC-HHHHHHHHHHcccChhhCCCHHHHhcChHHhhhccchhHHHHHHHHhh
Confidence            0  0011222344455 789999999999999999999999999987766666655555444433

>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A*

Probab=100.00  E-value=2.4e-43  Score=323.28  Aligned_cols=264  Identities=13%  Similarity=0.100  Sum_probs=200.9

Q ss_pred             ceEEEEcCeeEEEEEEeeccCceEEEEEEe----cCCCCceEEEEecCCCCChHH--HHHHHHHhhhcccccccccccee
Q 018699           40 NKTIEIGGKKYQIKGCAGQGGFAKVFKAYV----NGDPEDVVALKIQKPAFPWEF--YMYRQLDQRISGRERSSFGFAHR  113 (351)
Q Consensus        40 ~~~~~i~~~~Y~i~~~lg~G~~g~V~~a~~----~~~~~~~vaiK~~~~~~~~e~--~~~~~~~~~~~~~~~~~~~~~~~  113 (351)
                      ...+++..++|++.+.||+|+||+||+|++    +..+++.||||++........  ...+++........|++++.+..
T Consensus        14 ~~~~~~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~   93 (359)
T 3vhe_A           14 ASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLG   93 (359)
T ss_dssp             HHHHBCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEE
T ss_pred             cccccccccceeeceeecCCCCceEEEEEeccccccccceEEEEEEecCcCCHHHHHHHHHHHHHHHhhcCCcceeeeee
Confidence            345567789999999999999999999985    345678999999986543321  22223322222236788888888


Q ss_pred             eecc-cCeeEEEEEecCCCCHHHHHHHHHhh-------------------------------------------------
Q 018699          114 IHLY-SDYSILVCDYLSQGTLQDAINSYVVI-------------------------------------------------  143 (351)
Q Consensus       114 ~~~~-~~~~~lv~e~~~~~sL~~~l~~~~~~-------------------------------------------------  143 (351)
                      ++.. +...++||||+++|+|.+++......                                                 
T Consensus        94 ~~~~~~~~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  173 (359)
T 3vhe_A           94 ACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTKGARFRQGKDYVGAIPVDLKRRLDSITSSQSSASSGFVEEKSL  173 (359)
T ss_dssp             EECSTTSCCEEEEECCTTEEHHHHHHTTTTSBCSCC--------------------------------------------
T ss_pred             eeecCCCceEEEEEecCCCcHHHHHHhccccccccccccchhhcccccccccchhhhccccccCcccccccccccccccc
Confidence            7655 44589999999999999999864210                                                 


Q ss_pred             -------------CCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeeccCCCCCcccCCeEEee
Q 018699          144 -------------GKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSGPWQDQGLCLVD  210 (351)
Q Consensus       144 -------------~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~~~~~~~~~~~~l~D  210 (351)
                                   +..+++..++.++.||+.||+|||++||+||||||+||+++                 .++.++|+|
T Consensus       174 ~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~LH~~~ivH~Dikp~NIll~-----------------~~~~~kl~D  236 (359)
T 3vhe_A          174 SDVEEEEAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLS-----------------EKNVVKICD  236 (359)
T ss_dssp             ----------CTTTTCBCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEC-----------------GGGCEEECC
T ss_pred             chhhhcccccchhccccCHHHHHHHHHHHHHHHHHHHHCCcccCCCChhhEEEc-----------------CCCcEEEEe
Confidence                         11288999999999999999999999999999999999999                 778899999


Q ss_pred             cCCccccccCCCCccccccccCCCcccceeccCCCCCccchHhHHHHHHHHHHh-CccccccccCCCCC--ceeeecCcc
Q 018699          211 WGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQEKKPWKFQVDTYGLCAIVHMMLH-NSYMEIEKKASPDG--GLVYLPKLS  287 (351)
Q Consensus       211 fg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~-g~~p~~~~~~~~~~--~~~~~~~~~  287 (351)
                      ||++................||+.|+|||++.+..++.++|||||||++|+|++ |..||.........  .........
T Consensus       237 fg~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~~~~~~~~~~  316 (359)
T 3vhe_A          237 FGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMR  316 (359)
T ss_dssp             CGGGSCTTSCTTCEEC--CEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSHHHHHHHHHTCCCC
T ss_pred             ccceeeecccccchhccccCCCceeEChhhhcCCCCCchhhhhhHHHHHHHHHhcCCCCCCccchhHHHHHHHHcCCCCC
Confidence            999975433333333445568889999999999999999999999999999998 99999754432100  000111223


Q ss_pred             hhhhhHHHHHHHHHHHHhcCCCCCChHHHHHHHH
Q 018699          288 FKRYWKVELWKSLFTNLLNMSSGNDKEVLQNLQK  321 (351)
Q Consensus       288 ~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~~  321 (351)
                      .+..++ +.+.++|.+||..||.+||++.|+++|
T Consensus       317 ~~~~~~-~~l~~li~~~l~~dP~~Rps~~ell~~  349 (359)
T 3vhe_A          317 APDYTT-PEMYQTMLDCWHGEPSQRPTFSELVEH  349 (359)
T ss_dssp             CCTTCC-HHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             CCCCCC-HHHHHHHHHHccCChhhCCCHHHHHHH
Confidence            333444 789999999999999999999999987

>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A

Probab=100.00  E-value=7.8e-43  Score=321.20  Aligned_cols=260  Identities=12%  Similarity=0.066  Sum_probs=198.4

Q ss_pred             EEcCeeEEEEEEeeccCceEEEEEEec------CCCCceEEEEecCCCCChH-HHHHHHHHhhhccc-cccccccceeee
Q 018699           44 EIGGKKYQIKGCAGQGGFAKVFKAYVN------GDPEDVVALKIQKPAFPWE-FYMYRQLDQRISGR-ERSSFGFAHRIH  115 (351)
Q Consensus        44 ~i~~~~Y~i~~~lg~G~~g~V~~a~~~------~~~~~~vaiK~~~~~~~~e-~~~~~~~~~~~~~~-~~~~~~~~~~~~  115 (351)
                      .+..++|++.+.||+|+||+||+|++.      ..++..||+|++....... ...+.......... .|++++.+..++
T Consensus        77 ~~~~~~~~~~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~  156 (370)
T 2psq_A           77 EFPRDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGAC  156 (370)
T ss_dssp             BCCGGGEEEEEEESCCSSSEEEEEEEETCSTTCTTCEEEEEEEECCTTCBHHHHHHHHHHHHHHHHSCCCTTBCCEEEEE
T ss_pred             cccHHHCEeeeEEeeCCCeeEEEEEEecccCcCcCcceeEEEEEecCCcCHHHHHHHHHHHHHHHHhcCCCCEeeEEEEE
Confidence            345689999999999999999999852      1346789999997664322 11122222222333 688999999988


Q ss_pred             cccCeeEEEEEecCCCCHHHHHHHHHh------------hCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEE
Q 018699          116 LYSDYSILVCDYLSQGTLQDAINSYVV------------IGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLI  183 (351)
Q Consensus       116 ~~~~~~~lv~e~~~~~sL~~~l~~~~~------------~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill  183 (351)
                      ...+.+|+||||+++|+|.+++.....            ....++...++.++.||+.||.|||++||+||||||+||++
T Consensus       157 ~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll  236 (370)
T 2psq_A          157 TQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLV  236 (370)
T ss_dssp             CSSSSCEEEEECCTTCBHHHHHHHTCCC-----------CCCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEE
T ss_pred             ccCCCEEEEEEcCCCCCHHHHHHhhCCccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhCCeeccccchhhEEE
Confidence            888899999999999999999987421            01247889999999999999999999999999999999999


Q ss_pred             eecCCcceeeccCCCCCcccCCeEEeecCCccccccCCCCccccccccCCCcccceeccCCCCCccchHhHHHHHHHHHH
Q 018699          184 RYARDELTVLDHDRSGPWQDQGLCLVDWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQEKKPWKFQVDTYGLCAIVHMML  263 (351)
Q Consensus       184 ~~~~~~~~~~~~~~~~~~~~~~~~l~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~l~  263 (351)
                      +                 .++.+||+|||++................+++.|+|||++.+..++.++|||||||++|+|+
T Consensus       237 ~-----------------~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ell  299 (370)
T 2psq_A          237 T-----------------ENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIF  299 (370)
T ss_dssp             C-----------------TTCCEEECCCSSCEETTCCCTTCTTTTTTSCGGGCCHHHHHTCCCCHHHHHHHHHHHHHHHH
T ss_pred             C-----------------CCCCEEEccccCCcccCcccceecccCCCcccceECHhHhcCCCCCcHHHHHHHHHHHHHHH
Confidence            9                 77889999999997543222222233445678899999999999999999999999999999


Q ss_pred             h-CccccccccCCCCCcee-eecCcchhhhhHHHHHHHHHHHHhcCCCCCChHHHHHHHH
Q 018699          264 H-NSYMEIEKKASPDGGLV-YLPKLSFKRYWKVELWKSLFTNLLNMSSGNDKEVLQNLQK  321 (351)
Q Consensus       264 ~-g~~p~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~~  321 (351)
                      + |..||............ .......+..++ +.+.+||.+||..||++||++.|++++
T Consensus       300 t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~-~~l~~li~~~l~~dP~~Rpt~~ell~~  358 (370)
T 2psq_A          300 TLGGSPYPGIPVEELFKLLKEGHRMDKPANCT-NELYMMMRDCWHAVPSQRPTFKQLVED  358 (370)
T ss_dssp             TTSCCSSTTCCGGGHHHHHHTTCCCCCCTTSC-HHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             cCCCCCCCCCCHHHHHHHHhcCCCCCCCCCCC-HHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence            9 99998754322100000 011122333344 789999999999999999999999875

>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A*

Probab=100.00  E-value=5.2e-43  Score=318.37  Aligned_cols=253  Identities=17%  Similarity=0.161  Sum_probs=177.2

Q ss_pred             CeeEEEEE-EeeccCceEEEEEEecCCCCceEEEEecCCCCChHHHHHHHHHhhhccccccccccceeeecc----cCee
Q 018699           47 GKKYQIKG-CAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFPWEFYMYRQLDQRISGRERSSFGFAHRIHLY----SDYS  121 (351)
Q Consensus        47 ~~~Y~i~~-~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~  121 (351)
                      .++|++.+ .||+|+||+||+|+ +..+++.||||++....    ...+++........+++++.+..++..    +...
T Consensus        27 ~~~y~i~~~~lG~G~~g~V~~~~-~~~~~~~vavK~~~~~~----~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~  101 (336)
T 3fhr_A           27 TDDYQLSKQVLGLGVNGKVLECF-HRRTGQKCALKLLYDSP----KARQEVDHHWQASGGPHIVCILDVYENMHHGKRCL  101 (336)
T ss_dssp             GGTEEEEEEEEEEETTEEEEEEE-ETTTCCEEEEEEEESSH----HHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEE
T ss_pred             cceeEecceeeeeCCCeEEEEEE-ECCCCCEEEEEEecCcH----HHHHHHHHHHHhcCCCChHHHHHHHhhccCCCceE
Confidence            57899965 69999999999999 56788999999986542    223333344445567788877776654    5568


Q ss_pred             EEEEEecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeeccCCCCCc
Q 018699          122 ILVCDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSGPW  201 (351)
Q Consensus       122 ~lv~e~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~~~~~~  201 (351)
                      ++||||+++++|.+++....  +..+++..++.++.||+.||.|||++||+||||||+||+++.++              
T Consensus       102 ~lv~e~~~gg~L~~~l~~~~--~~~l~~~~~~~i~~ql~~~l~~LH~~~ivH~dlkp~NIll~~~~--------------  165 (336)
T 3fhr_A          102 LIIMECMEGGELFSRIQERG--DQAFTEREAAEIMRDIGTAIQFLHSHNIAHRDVKPENLLYTSKE--------------  165 (336)
T ss_dssp             EEEEECCTTEEHHHHHHTC---CCCCBHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEESCSS--------------
T ss_pred             EEEEeccCCCCHHHHHHhcC--CCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEEecC--------------
Confidence            99999999999999998642  34799999999999999999999999999999999999998432              


Q ss_pred             ccCCeEEeecCCccccccCCCCccccccccCCCcccceeccCCCCCccchHhHHHHHHHHHHhCccccccccCCCC----
Q 018699          202 QDQGLCLVDWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQEKKPWKFQVDTYGLCAIVHMMLHNSYMEIEKKASPD----  277 (351)
Q Consensus       202 ~~~~~~l~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~p~~~~~~~~~----  277 (351)
                      .++.++|+|||++....    ........+|+.|+|||++.+..++.++|||||||++|+|++|..||........    
T Consensus       166 ~~~~~kl~Dfg~~~~~~----~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~  241 (336)
T 3fhr_A          166 KDAVLKLTDFGFAKETT----QNALQTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGFPPFYSNTGQAISPGM  241 (336)
T ss_dssp             TTCCEEECCCTTCEEC--------------------------CHHHHHHHHHHHHHHHHHHHHSSCCC------------
T ss_pred             CCceEEEeccccceecc----ccccccCCCCcCccChhhhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCccchhhhhhH
Confidence            34569999999986533    2233455789999999999888889999999999999999999999976543211    


Q ss_pred             Cceee----ecCcchhhhhHHHHHHHHHHHHhcCCCCCChHHHHHHHHHHHH
Q 018699          278 GGLVY----LPKLSFKRYWKVELWKSLFTNLLNMSSGNDKEVLQNLQKSFQD  325 (351)
Q Consensus       278 ~~~~~----~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~~~~~~  325 (351)
                      .....    ....+....++ +.+.+||.+||..||++|||+.|+++|||..
T Consensus       242 ~~~~~~~~~~~~~~~~~~~~-~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~  292 (336)
T 3fhr_A          242 KRRIRLGQYGFPNPEWSEVS-EDAKQLIRLLLKTDPTERLTITQFMNHPWIN  292 (336)
T ss_dssp             ---------CCCTTTSTTCC-HHHHHHHHHHSCSSGGGSCCHHHHHHSHHHH
T ss_pred             HHhhhccccccCchhhccCC-HHHHHHHHHHCCCChhHCcCHHHHhcCcccc
Confidence            00000    01111112234 7899999999999999999999999999854

>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}

Probab=100.00  E-value=5.6e-43  Score=335.00  Aligned_cols=257  Identities=16%  Similarity=0.133  Sum_probs=197.7

Q ss_pred             CeeEEEEEEeeccCceEEEEEEecCCCCceEEEEecCCCCCh-------------HHHHHHHHHhhhcccccccccccee
Q 018699           47 GKKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFPW-------------EFYMYRQLDQRISGRERSSFGFAHR  113 (351)
Q Consensus        47 ~~~Y~i~~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~~~-------------e~~~~~~~~~~~~~~~~~~~~~~~~  113 (351)
                      +++|++.+.||+|+||+||+|+ +..+++.||+|++.+....             ....+......+....|++++.+..
T Consensus        35 ~~~Y~~~~~lG~G~~g~V~~~~-~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~  113 (504)
T 3q5i_A           35 GESYFKVRKLGSGAYGEVLLCK-EKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSLDHPNIIKLFD  113 (504)
T ss_dssp             GGTEEEEEEEEC--CEEEEEEE-ETTTCCEEEEEEEEC----------------CTHHHHHHHHHHHHTCCCTTBCCEEE
T ss_pred             ccceEEEeEecccCCeEEEEEE-ECCCCcEEEEEEEEhhhcccccccccchhhHHHHHHHHHHHHHHHhCCCCCCCeEEE
Confidence            5789999999999999999999 5778899999998754311             1111222223334557889999999


Q ss_pred             eecccCeeEEEEEecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceee
Q 018699          114 IHLYSDYSILVCDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVL  193 (351)
Q Consensus       114 ~~~~~~~~~lv~e~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~  193 (351)
                      ++..++..|+||||+++++|.+.+...    ..+++..++.++.||+.||.|||++||+||||||+||+++.++      
T Consensus       114 ~~~~~~~~~lv~e~~~gg~L~~~l~~~----~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~------  183 (504)
T 3q5i_A          114 VFEDKKYFYLVTEFYEGGELFEQIINR----HKFDECDAANIMKQILSGICYLHKHNIVHRDIKPENILLENKN------  183 (504)
T ss_dssp             EEECSSEEEEEEECCTTCBHHHHHHHH----SCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEESSTT------
T ss_pred             EEEcCCEEEEEEecCCCCcHHHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCcHHHEEEecCC------
Confidence            998899999999999999999998773    6799999999999999999999999999999999999998432      


Q ss_pred             ccCCCCCcccCCeEEeecCCccccccCCCCccccccccCCCcccceeccCCCCCccchHhHHHHHHHHHHhCcccccccc
Q 018699          194 DHDRSGPWQDQGLCLVDWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQEKKPWKFQVDTYGLCAIVHMMLHNSYMEIEKK  273 (351)
Q Consensus       194 ~~~~~~~~~~~~~~l~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~p~~~~~  273 (351)
                              ....++|+|||++....   .........||+.|+|||++.+ .++.++|||||||++|+|++|..||....
T Consensus       184 --------~~~~~kl~Dfg~a~~~~---~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~  251 (504)
T 3q5i_A          184 --------SLLNIKIVDFGLSSFFS---KDYKLRDRLGTAYYIAPEVLKK-KYNEKCDVWSCGVIMYILLCGYPPFGGQN  251 (504)
T ss_dssp             --------CCSSEEECCCTTCEECC---TTSCBCCCCSCTTTCCHHHHTT-CBCTHHHHHHHHHHHHHHHHSSCSSCCSS
T ss_pred             --------CCccEEEEECCCCEEcC---CCCccccccCCcCCCCHHHhcc-CCCchHHHHHHHHHHHHHHhCCCCCCCCC
Confidence                    22369999999986533   2334456679999999999874 58999999999999999999999997544


Q ss_pred             CCCCCceeeecCc----chhhhhHHHHHHHHHHHHhcCCCCCChHHHHHHHHHHHHHH
Q 018699          274 ASPDGGLVYLPKL----SFKRYWKVELWKSLFTNLLNMSSGNDKEVLQNLQKSFQDYL  327 (351)
Q Consensus       274 ~~~~~~~~~~~~~----~~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~~~~~~~~  327 (351)
                      .............    +....++ +.+++||.+||.+||.+|||+.|+|+|||....
T Consensus       252 ~~~~~~~i~~~~~~~~~~~~~~~s-~~~~~li~~~L~~dp~~R~t~~e~l~h~~~~~~  308 (504)
T 3q5i_A          252 DQDIIKKVEKGKYYFDFNDWKNIS-DEAKELIKLMLTYDYNKRCTAEEALNSRWIKKY  308 (504)
T ss_dssp             HHHHHHHHHHCCCCCCHHHHTTSC-HHHHHHHHHHTCSSTTTSCCHHHHHTSHHHHHT
T ss_pred             HHHHHHHHHcCCCCCCccccCCCC-HHHHHHHHHHcCCChhHCCCHHHHhcCHhhhhc
Confidence            3211000001111    1112233 789999999999999999999999999986543

>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A*

Probab=100.00  E-value=2.9e-43  Score=311.02  Aligned_cols=252  Identities=16%  Similarity=0.154  Sum_probs=189.8

Q ss_pred             CeeEEEEEEeeccCceEEEEEEecCCCCceEEEEecCCCCChH---HHHHHHHHhhhccccccccccceeeecccCeeEE
Q 018699           47 GKKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFPWE---FYMYRQLDQRISGRERSSFGFAHRIHLYSDYSIL  123 (351)
Q Consensus        47 ~~~Y~i~~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~~~e---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  123 (351)
                      .++|++.+.||+|+||.||+|. +..+|+.||+|++.......   ...+...........|++++.+..+....+..++
T Consensus        10 ~~~y~i~~~lg~G~~g~V~~~~-~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l   88 (276)
T 2h6d_A           10 IGHYVLGDTLGVGTFGKVKIGE-HQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQVISTPTDFFM   88 (276)
T ss_dssp             ETTEEEEEEEEECSSEEEEEEE-ETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEE
T ss_pred             eccEEEEeeecCCCCeEEEEEE-ECCCCceEEEEEeccccccchhHHHHHHHHHHHHhcCCCCCEeEEEEEEecCCeEEE
Confidence            4689999999999999999999 56778999999986431111   1122222233345568888888888888899999


Q ss_pred             EEEecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeeccCCCCCccc
Q 018699          124 VCDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSGPWQD  203 (351)
Q Consensus       124 v~e~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~~~~~~~~  203 (351)
                      ||||+++++|.+++...    ..+++..++.++.|++.|+.|||++|++|+||+|+||+++                 .+
T Consensus        89 v~e~~~~~~L~~~l~~~----~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nil~~-----------------~~  147 (276)
T 2h6d_A           89 VMEYVSGGELFDYICKH----GRVEEMEARRLFQQILSAVDYCHRHMVVHRDLKPENVLLD-----------------AH  147 (276)
T ss_dssp             EEECCCSCBHHHHHHHH----CSCCHHHHHHHHHHHHHHHHHHHHHCSSCCCCCGGGEEEC-----------------TT
T ss_pred             EEeccCCCcHHHHHhcc----CCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCChhhEEEC-----------------CC
Confidence            99999999999999874    5789999999999999999999999999999999999999                 67


Q ss_pred             CCeEEeecCCccccccCCCCccccccccCCCcccceeccCCCC-CccchHhHHHHHHHHHHhCccccccccCCCCCceee
Q 018699          204 QGLCLVDWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQEKKPW-KFQVDTYGLCAIVHMMLHNSYMEIEKKASPDGGLVY  282 (351)
Q Consensus       204 ~~~~l~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~-~~~~DiwslG~il~~l~~g~~p~~~~~~~~~~~~~~  282 (351)
                      +.++|+|||++....   .........+++.|+|||.+.+..+ +.++||||||+++|+|++|..||.............
T Consensus       148 ~~~~l~dfg~~~~~~---~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~  224 (276)
T 2h6d_A          148 MNAKIADFGLSNMMS---DGEFLRTSCGSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPFDDEHVPTLFKKIR  224 (276)
T ss_dssp             SCEEECCCCGGGCCC---C-------------CCTGGGTTSCCCHHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHH
T ss_pred             CCEEEeecccccccC---CCcceecccCCccccCHHHHcCCCCCCccchHHHHHHHHHHHHhCCCCCCCCcHHHHHHHhh
Confidence            889999999886532   1222344568999999999988765 589999999999999999999986533210000001


Q ss_pred             ecCcchhhhhHHHHHHHHHHHHhcCCCCCChHHHHHHHHHHH
Q 018699          283 LPKLSFKRYWKVELWKSLFTNLLNMSSGNDKEVLQNLQKSFQ  324 (351)
Q Consensus       283 ~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~~~~~  324 (351)
                      ......+...+ ..+.++|.+||+.||++||++.++++|+|.
T Consensus       225 ~~~~~~~~~~~-~~l~~li~~~l~~~p~~Rps~~~~l~h~~~  265 (276)
T 2h6d_A          225 GGVFYIPEYLN-RSVATLLMHMLQVDPLKRATIKDIREHEWF  265 (276)
T ss_dssp             HCCCCCCTTSC-HHHHHHHHHHTCSSGGGSCCHHHHHHSHHH
T ss_pred             cCcccCchhcC-HHHHHHHHHHccCChhhCCCHHHHHhChhh
Confidence            11112233334 789999999999999999999999999874

>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens}

Probab=100.00  E-value=1.3e-42  Score=313.09  Aligned_cols=270  Identities=16%  Similarity=0.116  Sum_probs=203.0

Q ss_pred             ccCCCcceEEEEcCeeEEEEEEeeccCceEEEEEEecCCCCceEEEEecCCCCChHHHHHHHHHhhhcccccccccccee
Q 018699           34 LNNSSRNKTIEIGGKKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFPWEFYMYRQLDQRISGRERSSFGFAHR  113 (351)
Q Consensus        34 ~~~~~~~~~~~i~~~~Y~i~~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~  113 (351)
                      .++..++..+.+.+++|++.+.||+|+||+||+|. +..+++.||+|++..........+...........|++++.+..
T Consensus        15 ~~~~~~g~~~~i~~~~y~~~~~lg~G~~g~V~~~~-~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~   93 (317)
T 2buj_A           15 ENLYFQGHMVIIDNKHYLFIQKLGEGGFSYVDLVE-GLHDGHFYALKRILCHEQQDREEAQREADMHRLFNHPNILRLVA   93 (317)
T ss_dssp             -CCSEEEEEEEETTEEEEEEEEEEC--CEEEEEEE-ETTTCCEEEEEEEEESSHHHHHHHHHHHHHHHTCCCTTBCCCCE
T ss_pred             cceeecccEEEECCeEEEEEEEecCCCCeEEEEEE-ecCCCcEEEEEEEecCCHHHHHHHHHHHHHHhhcCCCCeeeEEE
Confidence            34445667888999999999999999999999999 56788999999886543333333333334445567888888777


Q ss_pred             eec----ccCeeEEEEEecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCc
Q 018699          114 IHL----YSDYSILVCDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDE  189 (351)
Q Consensus       114 ~~~----~~~~~~lv~e~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~  189 (351)
                      +..    .....++||||+.+++|.+++......+..+++..++.++.|++.||.|||++||+|+||+|+||+++     
T Consensus        94 ~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~dlkp~NIl~~-----  168 (317)
T 2buj_A           94 YCLRERGAKHEAWLLLPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEAIHAKGYAHRDLKPTNILLG-----  168 (317)
T ss_dssp             EEEEEETTEEEEEEEEECCTTCBHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEC-----
T ss_pred             EEEeccCCCceeEEEEEeCCCCcHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEEc-----
Confidence            664    34578999999999999999987655467899999999999999999999999999999999999998     


Q ss_pred             ceeeccCCCCCcccCCeEEeecCCccccccCCCCc-------cccccccCCCcccceeccCCC---CCccchHhHHHHHH
Q 018699          190 LTVLDHDRSGPWQDQGLCLVDWGRGIDLHLFPDNM-------EFEGDCRTSGFRCIEMQEKKP---WKFQVDTYGLCAIV  259 (351)
Q Consensus       190 ~~~~~~~~~~~~~~~~~~l~Dfg~a~~~~~~~~~~-------~~~~~~g~~~y~aPE~~~~~~---~~~~~DiwslG~il  259 (351)
                                  .++.++|+|||.+..........       ......|++.|+|||++.+..   ++.++|||||||++
T Consensus       169 ------------~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il  236 (317)
T 2buj_A          169 ------------DEGQPVLMDLGSMNQACIHVEGSRQALTLQDWAAQRCTISYRAPELFSVQSHCVIDERTDVWSLGCVL  236 (317)
T ss_dssp             ------------TTSCEEECCCSSCEESCEEEESHHHHHHHHHHHHHHSCGGGCCGGGSSCCSEEEECTHHHHHHHHHHH
T ss_pred             ------------CCCCEEEEecCcchhcccccccccccccccccccccCCcccCCHhHhccCCCcCCCchhhHHHHHHHH
Confidence                        67889999999876432111111       112345799999999987654   68899999999999


Q ss_pred             HHHHhCccccccccCCCCCce---eeecCcchhhhhHHHHHHHHHHHHhcCCCCCChHHHHHHHHH
Q 018699          260 HMMLHNSYMEIEKKASPDGGL---VYLPKLSFKRYWKVELWKSLFTNLLNMSSGNDKEVLQNLQKS  322 (351)
Q Consensus       260 ~~l~~g~~p~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~~~  322 (351)
                      |+|++|..||...........   ......+.+..++ ..+.+||.+||+.||.+||++.+++.+.
T Consensus       237 ~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~l~~li~~~l~~dp~~Rps~~~ll~~L  301 (317)
T 2buj_A          237 YAMMFGEGPYDMVFQKGDSVALAVQNQLSIPQSPRHS-SALWQLLNSMMTVDPHQRPHIPLLLSQL  301 (317)
T ss_dssp             HHHHHSSCTTHHHHHTTSCHHHHHHCC--CCCCTTSC-HHHHHHHHHHTCSSGGGSCCHHHHHHHH
T ss_pred             HHHHhCCCChhhhhcccchhhHHhhccCCCCccccCC-HHHHHHHHHHhhcChhhCCCHHHHHHHh
Confidence            999999999865322111000   0001111122233 7899999999999999999999999863

>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*

Probab=100.00  E-value=9.9e-43  Score=317.83  Aligned_cols=250  Identities=18%  Similarity=0.121  Sum_probs=196.9

Q ss_pred             eeEEEEEEeeccCceEEEEEEecCCCCceEEEEecCCCCChHHHHHH---HHHhhhccccccccccceeeecccCeeEEE
Q 018699           48 KKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFPWEFYMYR---QLDQRISGRERSSFGFAHRIHLYSDYSILV  124 (351)
Q Consensus        48 ~~Y~i~~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~~~e~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv  124 (351)
                      ++|++.+.||+|+||+||+|+ +..+++.||||++............   .....+....|++++.+..++..++..++|
T Consensus        54 ~~y~~~~~lG~G~~g~Vy~a~-~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv  132 (348)
T 1u5q_A           54 KLFSDLREIGHGSFGAVYFAR-DVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLV  132 (348)
T ss_dssp             HHEEEEEEEEECSSEEEEEEE-ETTTTEEEEEEEEESCSSCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEE
T ss_pred             hheeeeeEEccCCCEEEEEEE-EccCCeEEEEEEEccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCeEEEE
Confidence            569999999999999999999 5678999999998755333222222   222334455788999988888888999999


Q ss_pred             EEecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeeccCCCCCcccC
Q 018699          125 CDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSGPWQDQ  204 (351)
Q Consensus       125 ~e~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~~~~~~~~~  204 (351)
                      |||+. |+|.+++...   +..+++..++.++.|++.||.|||++||+||||||+||+++                 .++
T Consensus       133 ~e~~~-g~l~~~l~~~---~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~-----------------~~~  191 (348)
T 1u5q_A          133 MEYCL-GSASDLLEVH---KKPLQEVEIAAVTHGALQGLAYLHSHNMIHRDVKAGNILLS-----------------EPG  191 (348)
T ss_dssp             EECCS-EEHHHHHHHH---TSCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCSGGGEEEE-----------------TTT
T ss_pred             EecCC-CCHHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEEC-----------------CCC
Confidence            99995 6888888654   57899999999999999999999999999999999999999                 677


Q ss_pred             CeEEeecCCccccccCCCCccccccccCCCcccceecc---CCCCCccchHhHHHHHHHHHHhCccccccccCCCCC-ce
Q 018699          205 GLCLVDWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQE---KKPWKFQVDTYGLCAIVHMMLHNSYMEIEKKASPDG-GL  280 (351)
Q Consensus       205 ~~~l~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~---~~~~~~~~DiwslG~il~~l~~g~~p~~~~~~~~~~-~~  280 (351)
                      .++|+|||++.....      .....||+.|+|||++.   +..++.++|||||||++|+|++|..||......... ..
T Consensus       192 ~~kL~DfG~a~~~~~------~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~~~~~~~~~  265 (348)
T 1u5q_A          192 LVKLGDFGSASIMAP------ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHI  265 (348)
T ss_dssp             EEEECCCTTCBSSSS------BCCCCSCGGGCCHHHHHTTSSCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHH
T ss_pred             CEEEeeccCceecCC------CCcccCCcceeCHhhhccccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHH
Confidence            899999999865321      23457899999999984   567889999999999999999999998654321000 00


Q ss_pred             ee-ecCcchhhhhHHHHHHHHHHHHhcCCCCCChHHHHHHHHHHHHH
Q 018699          281 VY-LPKLSFKRYWKVELWKSLFTNLLNMSSGNDKEVLQNLQKSFQDY  326 (351)
Q Consensus       281 ~~-~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~~~~~~~  326 (351)
                      .. ..+...+..++ +.+.+||.+||+.||++||++.++++|+|...
T Consensus       266 ~~~~~~~~~~~~~~-~~l~~li~~~l~~dP~~Rps~~~ll~h~~~~~  311 (348)
T 1u5q_A          266 AQNESPALQSGHWS-EYFRNFVDSCLQKIPQDRPTSEVLLKHRFVLR  311 (348)
T ss_dssp             HHSCCCCCCCTTSC-HHHHHHHHHHTCSSGGGSCCHHHHTTCHHHHS
T ss_pred             HhcCCCCCCCCCCC-HHHHHHHHHHcccChhhCcCHHHHhhChhhhc
Confidence            00 01111223344 78999999999999999999999999998543

>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ...

Probab=100.00  E-value=9e-43  Score=308.98  Aligned_cols=259  Identities=19%  Similarity=0.191  Sum_probs=197.5

Q ss_pred             CeeEEEEEEeeccCceEEEEEEecCCCCceEEEEecCCCCCh------HHHHHHHHHhhhccccccccccceeeecccCe
Q 018699           47 GKKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFPW------EFYMYRQLDQRISGRERSSFGFAHRIHLYSDY  120 (351)
Q Consensus        47 ~~~Y~i~~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~~~------e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  120 (351)
                      .++|++.+.||+|+||+||+|+ +..+++.||+|++......      ....+...........|++++.+..++...+.
T Consensus         4 ~~~y~~~~~lg~G~~g~V~~~~-~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~   82 (283)
T 3bhy_A            4 EDHYEMGEELGSGQFAIVRKCR-QKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIITLHDIFENKTD   82 (283)
T ss_dssp             HHHEEEEEEEEECSSEEEEEEE-ETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSE
T ss_pred             hhhhhhHHhhcccCceEEEEEE-EcCCCCeeehHHhhhccccccccchHHHHHHHHHHHHHhCCCCCeeehhheecCCCe
Confidence            4689999999999999999999 5677899999987643211      11222222223344568889888888888899


Q ss_pred             eEEEEEecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeeccCCCCC
Q 018699          121 SILVCDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSGP  200 (351)
Q Consensus       121 ~~lv~e~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~~~~~  200 (351)
                      .++||||+++++|.+++..    +..+++..++.++.|++.||.|||++|++|+||+|+||+++.++.            
T Consensus        83 ~~lv~e~~~~~~L~~~l~~----~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~Nil~~~~~~------------  146 (283)
T 3bhy_A           83 VVLILELVSGGELFDFLAE----KESLTEDEATQFLKQILDGVHYLHSKRIAHFDLKPENIMLLDKNV------------  146 (283)
T ss_dssp             EEEEEECCCSCBHHHHHHH----HSSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEESCSSS------------
T ss_pred             EEEEEeecCCCcHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCChHHEEEecCCC------------
Confidence            9999999999999999977    367999999999999999999999999999999999999984322            


Q ss_pred             cccCCeEEeecCCccccccCCCCccccccccCCCcccceeccCCCCCccchHhHHHHHHHHHHhCccccccccCCCCCce
Q 018699          201 WQDQGLCLVDWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQEKKPWKFQVDTYGLCAIVHMMLHNSYMEIEKKASPDGGL  280 (351)
Q Consensus       201 ~~~~~~~l~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~p~~~~~~~~~~~~  280 (351)
                       ....++|+|||.+.....   ........+++.|+|||++.+..++.++||||||+++|+|++|..||...........
T Consensus       147 -~~~~~kl~dfg~~~~~~~---~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~  222 (283)
T 3bhy_A          147 -PNPRIKLIDFGIAHKIEA---GNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGETKQETLTN  222 (283)
T ss_dssp             -SSCCEEECCCTTCEECC-----------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHH
T ss_pred             -CCCceEEEecccceeccC---CCcccccCCCcCccCcceecCCCCCcchhhhhHHHHHHHHHHCCCCCCCcchHHHHHH
Confidence             234799999999865432   2233445689999999999988899999999999999999999999975432100000


Q ss_pred             ----eeecCcchhhhhHHHHHHHHHHHHhcCCCCCChHHHHHHHHHHHHHH
Q 018699          281 ----VYLPKLSFKRYWKVELWKSLFTNLLNMSSGNDKEVLQNLQKSFQDYL  327 (351)
Q Consensus       281 ----~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~~~~~~~~  327 (351)
                          ............+ +.+.+||.+||..||++||++.+++.|+|..-.
T Consensus       223 ~~~~~~~~~~~~~~~~~-~~~~~li~~~l~~dp~~Rps~~~~l~h~~~~~~  272 (283)
T 3bhy_A          223 ISAVNYDFDEEYFSNTS-ELAKDFIRRLLVKDPKRRMTIAQSLEHSWIKAI  272 (283)
T ss_dssp             HHTTCCCCCHHHHTTCC-HHHHHHHHTTSCSSGGGSCCHHHHHHCHHHHHH
T ss_pred             hHhcccCCcchhcccCC-HHHHHHHHHHccCCHhHCcCHHHHHhCHHHHHH
Confidence                0001111122233 789999999999999999999999999875543

>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7

Probab=100.00  E-value=4.9e-43  Score=322.18  Aligned_cols=249  Identities=20%  Similarity=0.233  Sum_probs=188.1

Q ss_pred             CeeEEEEEEeeccCceEEEEEEecCCCCceEEEEecCCCCChHHHH--HHHHHhhhccccccccccceeeeccc------
Q 018699           47 GKKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFPWEFYM--YRQLDQRISGRERSSFGFAHRIHLYS------  118 (351)
Q Consensus        47 ~~~Y~i~~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~~~e~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~------  118 (351)
                      .++|++.+.||+|+||+||+|. +..+|+.||||++......+...  .......+....|++++.+..++...      
T Consensus        24 ~~~y~~~~~lG~G~~g~V~~a~-~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~  102 (367)
T 1cm8_A           24 RAVYRDLQPVGSGAYGAVCSAV-DGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETLDDF  102 (367)
T ss_dssp             BSSEEEEEEC------CEEEEE-ETTTCCEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCBTTBCCCSEEECSCSSTTTC
T ss_pred             cceEEEeEEeeecCCeEEEEEE-ECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCcCCCCceeeEecCCccccC
Confidence            5789999999999999999999 57889999999987655433221  11122233445678888887776544      


Q ss_pred             CeeEEEEEecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeeccCCC
Q 018699          119 DYSILVCDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRS  198 (351)
Q Consensus       119 ~~~~lv~e~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~~~  198 (351)
                      ..+|+||||+ +++|.+++..     ..+++..++.++.||+.||.|||++||+||||||+||+++              
T Consensus       103 ~~~~lv~e~~-~~~L~~~~~~-----~~l~~~~~~~~~~qi~~~L~~LH~~~ivH~Dlkp~NIll~--------------  162 (367)
T 1cm8_A          103 TDFYLVMPFM-GTDLGKLMKH-----EKLGEDRIQFLVYQMLKGLRYIHAAGIIHRDLKPGNLAVN--------------  162 (367)
T ss_dssp             CCCEEEEECC-SEEHHHHHHH-----CCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEC--------------
T ss_pred             ceEEEEEecC-CCCHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHHCCccccCcCHHHEEEc--------------
Confidence            3469999999 8899999876     4689999999999999999999999999999999999999              


Q ss_pred             CCcccCCeEEeecCCccccccCCCCccccccccCCCcccceeccC-CCCCccchHhHHHHHHHHHHhCccccccccCCCC
Q 018699          199 GPWQDQGLCLVDWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQEK-KPWKFQVDTYGLCAIVHMMLHNSYMEIEKKASPD  277 (351)
Q Consensus       199 ~~~~~~~~~l~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~~DiwslG~il~~l~~g~~p~~~~~~~~~  277 (351)
                         .++.+||+|||++....     .......+|+.|+|||++.+ ..++.++|||||||++|+|++|..||........
T Consensus       163 ---~~~~~kl~Dfg~a~~~~-----~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~  234 (367)
T 1cm8_A          163 ---EDCELKILDFGLARQAD-----SEMTGYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLDQ  234 (367)
T ss_dssp             ---TTCCEEECCCTTCEECC-----SSCCSSCSCGGGCCTHHHHTTTCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHH
T ss_pred             ---CCCCEEEEeeecccccc-----cccCcCcCCCCcCCHHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCCCHHHH
Confidence               77889999999987532     22345678999999999877 6789999999999999999999999975432100


Q ss_pred             --------Cc--------------------eeeecCcch---hhhhHHHHHHHHHHHHhcCCCCCChHHHHHHHHHHHH
Q 018699          278 --------GG--------------------LVYLPKLSF---KRYWKVELWKSLFTNLLNMSSGNDKEVLQNLQKSFQD  325 (351)
Q Consensus       278 --------~~--------------------~~~~~~~~~---~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~~~~~~  325 (351)
                              +.                    ........+   ....+ +.+.+||.+||..||++|||+.|+|+|||..
T Consensus       235 l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~ll~~mL~~dP~~R~t~~e~l~hp~f~  312 (367)
T 1cm8_A          235 LKEIMKVTGTPPAEFVQRLQSDEAKNYMKGLPELEKKDFASILTNAS-PLAVNLLEKMLVLDAEQRVTAGEALAHPYFE  312 (367)
T ss_dssp             HHHHHHHHCCCCHHHHHTCSCHHHHHHHHHSCCCCCCCGGGTCTTCC-HHHHHHHHHHSCSSTTTSCCHHHHHHSGGGT
T ss_pred             HHHHHHhcCCCCHHHHHHhhhHHHHHHHHhCCCCCCCCHHHHCCCCC-HHHHHHHHHHccCChhHCCCHHHHhcChHHH
Confidence                    00                    000001111   11223 7899999999999999999999999998743

>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A

Probab=100.00  E-value=5.6e-43  Score=327.30  Aligned_cols=268  Identities=19%  Similarity=0.234  Sum_probs=194.5

Q ss_pred             eeEEEEEEeeccCceEEEEEEecCCCCceEEEEecCCCCC-----hH---HHHHHHHHhhhccccccccccceeeecccC
Q 018699           48 KKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFP-----WE---FYMYRQLDQRISGRERSSFGFAHRIHLYSD  119 (351)
Q Consensus        48 ~~Y~i~~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~~-----~e---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  119 (351)
                      ++|++.+.||+|+||+||+|. +..+++.||+|++.+...     .+   ...+......+....|++++.+..++. .+
T Consensus       135 ~~y~~~~~LG~G~~g~V~~a~-~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~-~~  212 (419)
T 3i6u_A          135 DEYIMSKTLGSGACGEVKLAF-ERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFD-AE  212 (419)
T ss_dssp             TTEEEEEEEEECSSSEEEEEE-ETTTCCEEEEEEEEGGGGTTC--------CCHHHHHHHHHHCCCTTBCCCCEEEE-SS
T ss_pred             ccEEEEeEEeeCCCeEEEEEE-ECCCCcEEEEEEEEechhcccccccchhHHHHHHHHHHHHhCCCCCEeeEEEEEe-cC
Confidence            679999999999999999999 578889999999764210     00   001111122233446788888777754 45


Q ss_pred             eeEEEEEecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeeccCCCC
Q 018699          120 YSILVCDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSG  199 (351)
Q Consensus       120 ~~~lv~e~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~~~~  199 (351)
                      ..|+||||+++++|.+++..    +..+++..++.++.|++.||+|||++||+||||||+||+++.++            
T Consensus       213 ~~~lv~e~~~~g~L~~~l~~----~~~~~~~~~~~i~~qi~~~l~~LH~~~ivHrDlkp~NIll~~~~------------  276 (419)
T 3i6u_A          213 DYYIVLELMEGGELFDKVVG----NKRLKEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQE------------  276 (419)
T ss_dssp             EEEEEEECCTTCBGGGGTSS----SCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESSSS------------
T ss_pred             ceEEEEEcCCCCcHHHHHhc----cCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCChHhEEEecCC------------
Confidence            57999999999999988876    56899999999999999999999999999999999999998432            


Q ss_pred             CcccCCeEEeecCCccccccCCCCccccccccCCCcccceeccC---CCCCccchHhHHHHHHHHHHhCccccccccCCC
Q 018699          200 PWQDQGLCLVDWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQEK---KPWKFQVDTYGLCAIVHMMLHNSYMEIEKKASP  276 (351)
Q Consensus       200 ~~~~~~~~l~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~---~~~~~~~DiwslG~il~~l~~g~~p~~~~~~~~  276 (351)
                        .+..+||+|||++....   ........+||+.|+|||++.+   ..++.++|||||||++|+|++|..||.......
T Consensus       277 --~~~~~kl~DFG~a~~~~---~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~~~~  351 (419)
T 3i6u_A          277 --EDCLIKITDFGHSKILG---ETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQV  351 (419)
T ss_dssp             --SSCCEEECCSSTTTSCC--------------CTTCCTTTTC----CTTHHHHHHHHHHHHHHHHHHSSCSSCCCSSSC
T ss_pred             --CcceEEEeecccceecC---CCccccccCCCCCccCceeeecCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCcchH
Confidence              34569999999996533   2233445679999999999853   567889999999999999999999997543321


Q ss_pred             CCce-eeecC-cchhh---hhHHHHHHHHHHHHhcCCCCCChHHHHHHHHHHHHHHhhChHHHHHHHHHHHH
Q 018699          277 DGGL-VYLPK-LSFKR---YWKVELWKSLFTNLLNMSSGNDKEVLQNLQKSFQDYLCSNPQLLKNLKELLAK  343 (351)
Q Consensus       277 ~~~~-~~~~~-~~~~~---~~~~~~~~~li~~~L~~dP~~R~s~~e~l~~~~~~~~~~~~~~~~~~~~~~~~  343 (351)
                      .... ..... ...+.   ..+ +.+.+||.+||.+||.+||++.|+|+|||.    .+....+.+++++.+
T Consensus       352 ~~~~~i~~~~~~~~~~~~~~~~-~~~~~li~~~L~~dP~~Rps~~e~l~hp~~----~~~~~~~~~~~ll~~  418 (419)
T 3i6u_A          352 SLKDQITSGKYNFIPEVWAEVS-EKALDLVKKLLVVDPKARFTTEEALRHPWL----QDEDMKRKFQDLLSE  418 (419)
T ss_dssp             CHHHHHHTTCCCCCHHHHTTSC-HHHHHHHHHHSCSSTTTSCCHHHHHHSGGG----CCHHHHHHHHHHHHC
T ss_pred             HHHHHHhcCCCCCCchhhcccC-HHHHHHHHHHccCChhHCcCHHHHhCCccc----CChhHHHHHHHHhhc
Confidence            1000 00010 11122   233 789999999999999999999999999853    456666666666643

>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A*

Probab=100.00  E-value=2e-42  Score=308.89  Aligned_cols=259  Identities=17%  Similarity=0.130  Sum_probs=196.4

Q ss_pred             EEcCeeEEEEEEeeccCceEEEEEEecCCCCceEEEEecCCCCChHHHHHHHHHhhhccccccccccceeeecccCeeEE
Q 018699           44 EIGGKKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFPWEFYMYRQLDQRISGRERSSFGFAHRIHLYSDYSIL  123 (351)
Q Consensus        44 ~i~~~~Y~i~~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  123 (351)
                      .+.+++|++.+.||+|+||+||+|. +..+++.||+|++......+ ...+++........+++++.+..+.......++
T Consensus         6 ~~~~~~y~~~~~lg~G~~g~V~~~~-~~~~~~~vavK~~~~~~~~~-~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~l   83 (298)
T 1csn_A            6 NVVGVHYKVGRRIGEGSFGVIFEGT-NLLNNQQVAIKFEPRRSDAP-QLRDEYRTYKLLAGCTGIPNVYYFGQEGLHNVL   83 (298)
T ss_dssp             CEETTTEEEEEEEEECSSCEEEEEE-ETTTTEEEEEEEEECCTTSC-CHHHHHHHHHHTTTCTTCCCEEEEEEETTEEEE
T ss_pred             cccccceEEEEEEeecCCEEEEEEE-ECCCCcEEEEEEeccCCccH-HHHHHHHHHHHHhcCCCCCeEEeecCCCceeEE
Confidence            3457899999999999999999999 57789999999886443221 112222222122246677777788888889999


Q ss_pred             EEEecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeeccCCCCCccc
Q 018699          124 VCDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSGPWQD  203 (351)
Q Consensus       124 v~e~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~~~~~~~~  203 (351)
                      ||||+ +++|.+++...   +..+++..++.++.|++.||.|||++||+||||||+||+++.+...            ..
T Consensus        84 v~e~~-~~~L~~~l~~~---~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~NIl~~~~~~~------------~~  147 (298)
T 1csn_A           84 VIDLL-GPSLEDLLDLC---GRKFSVKTVAMAAKQMLARVQSIHEKSLVYRDIKPDNFLIGRPNSK------------NA  147 (298)
T ss_dssp             EEECC-CCBHHHHHHHT---TTCCCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEECCSSST------------TT
T ss_pred             EEEec-CCCHHHHHHHh---ccCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEeccCCCC------------CC
Confidence            99999 99999999874   4579999999999999999999999999999999999999843321            34


Q ss_pred             CCeEEeecCCccccccCCCC-----ccccccccCCCcccceeccCCCCCccchHhHHHHHHHHHHhCccccccccCCCCC
Q 018699          204 QGLCLVDWGRGIDLHLFPDN-----MEFEGDCRTSGFRCIEMQEKKPWKFQVDTYGLCAIVHMMLHNSYMEIEKKASPDG  278 (351)
Q Consensus       204 ~~~~l~Dfg~a~~~~~~~~~-----~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~p~~~~~~~~~~  278 (351)
                      +.++|+|||++.........     .......||+.|+|||++.+..++.++|||||||++|+|++|..||.........
T Consensus       148 ~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~  227 (298)
T 1csn_A          148 NMIYVVDFGMVKFYRDPVTKQHIPYREKKNLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKAATNK  227 (298)
T ss_dssp             TCEEECCCTTCEESBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCSCCHH
T ss_pred             CeEEEEECccccccccccccccccccCccCCCCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHcCCCCcchhhccccH
Confidence            45999999998754322111     1234557899999999999999999999999999999999999999764432110


Q ss_pred             cee--------eecCcchhhhhHHHHHHHHHHHHhcCCCCCChHHHHHHHH
Q 018699          279 GLV--------YLPKLSFKRYWKVELWKSLFTNLLNMSSGNDKEVLQNLQK  321 (351)
Q Consensus       279 ~~~--------~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~~  321 (351)
                      ...        ..+.......++ +.+.+||.+||+.||++||++.+++..
T Consensus       228 ~~~~~~~~~~~~~~~~~~~~~~~-~~l~~li~~~l~~dp~~RP~~~~l~~~  277 (298)
T 1csn_A          228 QKYERIGEKKQSTPLRELCAGFP-EEFYKYMHYARNLAFDATPDYDYLQGL  277 (298)
T ss_dssp             HHHHHHHHHHHHSCHHHHTTTSC-HHHHHHHHHHHHCCTTCCCCHHHHHHH
T ss_pred             HHHHHHHhhccCccHHHHHhhCc-HHHHHHHHHHhcCCcccCCCHHHHHHH
Confidence            000        001111112234 789999999999999999999888754

>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ...

Probab=100.00  E-value=2.4e-43  Score=311.51  Aligned_cols=254  Identities=17%  Similarity=0.151  Sum_probs=198.0

Q ss_pred             eeEEEEEEeeccCceEEEEEEecCCCCceEEEEecCCCCC-hHHHHHHHHHhhhccccccccccceeeecccCeeEEEEE
Q 018699           48 KKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFP-WEFYMYRQLDQRISGRERSSFGFAHRIHLYSDYSILVCD  126 (351)
Q Consensus        48 ~~Y~i~~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~~-~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e  126 (351)
                      ++|++.+.||+|+||+||+|. +..+++.||+|++..... .....+...........|++++....+...++..++|||
T Consensus         7 ~~y~~~~~lg~G~~g~V~~~~-~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e   85 (276)
T 2yex_A            7 EDWDLVQTLGEGAYGEVQLAV-NRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLE   85 (276)
T ss_dssp             HHEEEEEEEEECSSSEEEEEE-ETTTCCEEEEEEEEGGGCTTHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred             cceEEEEEeecCCCcEEEEEE-ECCCCcEEEEEEeeeccchhhhHHHHHHHHHHHhcCCCCceeeeeEEEcCCEEEEEEE
Confidence            589999999999999999999 567789999999864322 122222222333445578888888888888899999999


Q ss_pred             ecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeeccCCCCCcccCCe
Q 018699          127 YLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSGPWQDQGL  206 (351)
Q Consensus       127 ~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~~~~~~~~~~~  206 (351)
                      |+++++|.+++..    +..+++..++.++.|++.||.|||++|++|+||+|+||+++                 .++.+
T Consensus        86 ~~~~~~L~~~l~~----~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~Nil~~-----------------~~~~~  144 (276)
T 2yex_A           86 YCSGGELFDRIEP----DIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLD-----------------ERDNL  144 (276)
T ss_dssp             CCTTEEGGGGSBT----TTBCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEC-----------------TTCCE
T ss_pred             ecCCCcHHHHHhh----ccCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCChHHEEEc-----------------cCCCE
Confidence            9999999998865    46799999999999999999999999999999999999999                 67889


Q ss_pred             EEeecCCccccccCCCCccccccccCCCcccceeccCCCC-CccchHhHHHHHHHHHHhCccccccccCCCCCceee---
Q 018699          207 CLVDWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQEKKPW-KFQVDTYGLCAIVHMMLHNSYMEIEKKASPDGGLVY---  282 (351)
Q Consensus       207 ~l~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~-~~~~DiwslG~il~~l~~g~~p~~~~~~~~~~~~~~---  282 (351)
                      +|+|||.+................|++.|+|||.+.+..+ +.++||||||+++|+|++|..||.............   
T Consensus       145 kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~  224 (276)
T 2yex_A          145 KISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEK  224 (276)
T ss_dssp             EECCCTTCEECEETTEECCBCCCCSCGGGCCGGGGTCSSBCHHHHHHHHHHHHHHHHHHSSCCCSCSCTTSHHHHHHHTT
T ss_pred             EEeeCCCccccCCCcchhcccCCccccCccChHHHhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCchHHHHHHHhhhc
Confidence            9999999865432222222345678999999999987665 688999999999999999999997644321000000   


Q ss_pred             ecCcchhhhhHHHHHHHHHHHHhcCCCCCChHHHHHHHHHHH
Q 018699          283 LPKLSFKRYWKVELWKSLFTNLLNMSSGNDKEVLQNLQKSFQ  324 (351)
Q Consensus       283 ~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~~~~~  324 (351)
                      ..........+ +.+.+||.+||..||++||++.|+++|+|.
T Consensus       225 ~~~~~~~~~~~-~~~~~li~~~l~~~p~~Rps~~~il~~~~~  265 (276)
T 2yex_A          225 KTYLNPWKKID-SAPLALLHKILVENPSARITIPDIKKDRWY  265 (276)
T ss_dssp             CTTSTTGGGSC-HHHHHHHHHHSCSSTTTSCCHHHHTTCTTT
T ss_pred             ccccCchhhcC-HHHHHHHHHHCCCCchhCCCHHHHhcCccc
Confidence            01111112233 788999999999999999999999999863

>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens}

Probab=100.00  E-value=7.8e-43  Score=322.73  Aligned_cols=264  Identities=12%  Similarity=0.097  Sum_probs=201.7

Q ss_pred             ceEEEEcCeeEEEEEEeeccCceEEEEEEecC------CCCceEEEEecCCCCChH--HHHHHHHHhhhccc-ccccccc
Q 018699           40 NKTIEIGGKKYQIKGCAGQGGFAKVFKAYVNG------DPEDVVALKIQKPAFPWE--FYMYRQLDQRISGR-ERSSFGF  110 (351)
Q Consensus        40 ~~~~~i~~~~Y~i~~~lg~G~~g~V~~a~~~~------~~~~~vaiK~~~~~~~~e--~~~~~~~~~~~~~~-~~~~~~~  110 (351)
                      ...+++..++|++.+.||+|+||+||+|++..      ..+..||+|++.......  ....+++. .+... .+++++.
T Consensus        61 ~~~~~i~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~-~l~~l~~hpnIv~  139 (382)
T 3tt0_A           61 DPRWELPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEME-MMKMIGKHKNIIN  139 (382)
T ss_dssp             CTTTBCCGGGEEEEEEEEECSSEEEEEEEEETSSTTCTTCEEEEEEEEECTTCCHHHHHHHHHHHH-HHHHHCCCTTBCC
T ss_pred             CcccccchhheEeeeEEecCCCeEEEEEEEccccccccccceEEEEEeeccccCHHHHHHHHHHHH-HHHHhcCCchhhh
Confidence            34456778999999999999999999999522      334689999987664332  11222222 22233 7889999


Q ss_pred             ceeeecccCeeEEEEEecCCCCHHHHHHHHHhh------------CCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCC
Q 018699          111 AHRIHLYSDYSILVCDYLSQGTLQDAINSYVVI------------GKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKP  178 (351)
Q Consensus       111 ~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~~------------~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p  178 (351)
                      +..++..++..++||||+++++|.+++......            ...+++..++.++.||+.||.|||++||+||||||
T Consensus       140 ~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp  219 (382)
T 3tt0_A          140 LLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAA  219 (382)
T ss_dssp             EEEEECSSSSCEEEEECCTTCBHHHHHHHTCCSSSSSCCCCCSSCCCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCG
T ss_pred             heeeeccCCceEEEEEecCCCcHHHHHHHhcccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhCCEecCCCCc
Confidence            999888888999999999999999999874210            13589999999999999999999999999999999


Q ss_pred             CcEEEeecCCcceeeccCCCCCcccCCeEEeecCCccccccCCCCccccccccCCCcccceeccCCCCCccchHhHHHHH
Q 018699          179 DNLLIRYARDELTVLDHDRSGPWQDQGLCLVDWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQEKKPWKFQVDTYGLCAI  258 (351)
Q Consensus       179 ~Nill~~~~~~~~~~~~~~~~~~~~~~~~l~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~i  258 (351)
                      +||+++                 .++.++|+|||++................+++.|+|||++.+..++.++|||||||+
T Consensus       220 ~NIll~-----------------~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~i  282 (382)
T 3tt0_A          220 RNVLVT-----------------EDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVL  282 (382)
T ss_dssp             GGEEEC-----------------TTCCEEECSCSCCCCSSCCCTTCCCTTCCCGGGGSCHHHHHSCCCCHHHHHHHHHHH
T ss_pred             ceEEEc-----------------CCCcEEEcccCcccccccccccccccCCCCCcceeCHHHhcCCCCCchhHHHHHHHH
Confidence            999999                 778899999999875433222223344457888999999999999999999999999


Q ss_pred             HHHHHh-CccccccccCCCCCce-eeecCcchhhhhHHHHHHHHHHHHhcCCCCCChHHHHHHHHH
Q 018699          259 VHMMLH-NSYMEIEKKASPDGGL-VYLPKLSFKRYWKVELWKSLFTNLLNMSSGNDKEVLQNLQKS  322 (351)
Q Consensus       259 l~~l~~-g~~p~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~~~  322 (351)
                      +|+|++ |..||........... ........+..++ +.+.+||.+||+.||++||++.|++++.
T Consensus       283 l~ellt~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~-~~l~~li~~~l~~dP~~Rps~~ell~~L  347 (382)
T 3tt0_A          283 LWEIFTLGGSPYPGVPVEELFKLLKEGHRMDKPSNCT-NELYMMMRDCWHAVPSQRPTFKQLVEDL  347 (382)
T ss_dssp             HHHHHTTSCCSSTTCCHHHHHHHHHTTCCCCCCSSCC-HHHHHHHHHHTCSSGGGSCCHHHHHHHH
T ss_pred             HHHHHhCCCCCCCCCCHHHHHHHHHcCCCCCCCccCC-HHHHHHHHHHcCCChhhCcCHHHHHHHH
Confidence            999999 9999865432100000 0011112223334 7899999999999999999999999863

>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens}

Probab=100.00  E-value=1.2e-42  Score=312.79  Aligned_cols=259  Identities=17%  Similarity=0.135  Sum_probs=198.2

Q ss_pred             EEcCeeEEEEEEeeccCceEEEEEEecCCCCceEEEEecCCCCChHHHHHHHHHhhhccccccccccceeeecccCeeEE
Q 018699           44 EIGGKKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFPWEFYMYRQLDQRISGRERSSFGFAHRIHLYSDYSIL  123 (351)
Q Consensus        44 ~i~~~~Y~i~~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  123 (351)
                      ....++|++.+.||+|+||+||+|. +..+|+.||+|++......+ ...++ ........|++++.+..+....+..++
T Consensus        25 ~~~~~~y~~~~~lg~G~~g~Vy~~~-~~~~~~~vaiK~~~~~~~~~-~~~~e-~~~l~~l~h~~i~~~~~~~~~~~~~~l  101 (314)
T 3com_A           25 KQPEEVFDVLEKLGEGSYGSVYKAI-HKETGQIVAIKQVPVESDLQ-EIIKE-ISIMQQCDSPHVVKYYGSYFKNTDLWI  101 (314)
T ss_dssp             -----CEEEEEECC----CEEEEEE-ETTTCCEEEEEEEETTSCCH-HHHHH-HHHHHTCCCTTBCCEEEEEEETTEEEE
T ss_pred             hcchhhhhhheeeccCCCeEEEEEE-ECCCCCEEEEEecCchHHHH-HHHHH-HHHHHhCCCCCCccEEEEEEeCCEEEE
Confidence            3456889999999999999999999 56778999999987653221 12222 223344567888888888888889999


Q ss_pred             EEEecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeeccCCCCCccc
Q 018699          124 VCDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSGPWQD  203 (351)
Q Consensus       124 v~e~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~~~~~~~~  203 (351)
                      ||||+++++|.+++...   +..+++..++.++.|++.|+.|||++|++|+||+|+||+++                 .+
T Consensus       102 v~e~~~~~~L~~~~~~~---~~~~~~~~~~~i~~~i~~~l~~lH~~~i~H~dl~p~Nil~~-----------------~~  161 (314)
T 3com_A          102 VMEYCGAGSVSDIIRLR---NKTLTEDEIATILQSTLKGLEYLHFMRKIHRDIKAGNILLN-----------------TE  161 (314)
T ss_dssp             EEECCTTEEHHHHHHHH---TCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEC-----------------TT
T ss_pred             EeecCCCCCHHHHHHhc---CCCCCHHHHHHHHHHHHHHHHHHHhCCCcCCCcCHHHEEEC-----------------CC
Confidence            99999999999999754   57899999999999999999999999999999999999999                 67


Q ss_pred             CCeEEeecCCccccccCCCCccccccccCCCcccceeccCCCCCccchHhHHHHHHHHHHhCccccccccCCCCCce---
Q 018699          204 QGLCLVDWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQEKKPWKFQVDTYGLCAIVHMMLHNSYMEIEKKASPDGGL---  280 (351)
Q Consensus       204 ~~~~l~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~p~~~~~~~~~~~~---  280 (351)
                      +.++|+|||.+......  ........|++.|+|||++.+..++.++||||||+++|+|++|..||...........   
T Consensus       162 ~~~kl~dfg~~~~~~~~--~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~  239 (314)
T 3com_A          162 GHAKLADFGVAGQLTDT--MAKRNTVIGTPFWMAPEVIQEIGYNCVADIWSLGITAIEMAEGKPPYADIHPMRAIFMIPT  239 (314)
T ss_dssp             CCEEECCCTTCEECBTT--BSCBCCCCSCGGGCCHHHHSSSCBCTTHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHH
T ss_pred             CCEEEeecccchhhhhh--ccccCccCCCCCccChhhcCCCCCCccccHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhc
Confidence            78999999998654321  1223445689999999999988899999999999999999999999965332100000   


Q ss_pred             eeecCcchhhhhHHHHHHHHHHHHhcCCCCCChHHHHHHHHHHHHHHh
Q 018699          281 VYLPKLSFKRYWKVELWKSLFTNLLNMSSGNDKEVLQNLQKSFQDYLC  328 (351)
Q Consensus       281 ~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~~~~~~~~~  328 (351)
                      ...+....+..++ +.+.+||.+||..||.+||++.++++|+|.....
T Consensus       240 ~~~~~~~~~~~~~-~~l~~li~~~l~~dp~~Rpt~~~ll~~~~~~~~~  286 (314)
T 3com_A          240 NPPPTFRKPELWS-DNFTDFVKQCLVKSPEQRATATQLLQHPFVRSAK  286 (314)
T ss_dssp             SCCCCCSSGGGSC-HHHHHHHHHHTCSCTTTSCCHHHHTTSHHHHTCC
T ss_pred             CCCcccCCcccCC-HHHHHHHHHHccCChhhCcCHHHHHhCHHHhcCC
Confidence            0011222344455 8899999999999999999999999999865443

>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A*

Probab=100.00  E-value=5.9e-43  Score=316.02  Aligned_cols=257  Identities=18%  Similarity=0.092  Sum_probs=203.3

Q ss_pred             cCeeEEEEEEeeccCceEEEEEEecCCCCceEEEEecCCCCChHHHHHHHHHhhhccccccccccceeeecccCeeEEEE
Q 018699           46 GGKKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFPWEFYMYRQLDQRISGRERSSFGFAHRIHLYSDYSILVC  125 (351)
Q Consensus        46 ~~~~Y~i~~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~  125 (351)
                      ..++|++.+.||+|+||+||+|++  .+++.||+|++..........+...........|++++....++...+..++||
T Consensus        37 ~~~~y~~~~~lg~G~~g~Vy~~~~--~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~  114 (321)
T 2qkw_B           37 ATNNFDHKFLIGHGVFGKVYKGVL--RDGAKVALKRRTPESSQGIEEFETEIETLSFCRHPHLVSLIGFCDERNEMILIY  114 (321)
T ss_dssp             CCCCCSCCCCSCBCSSSEEEEEEC--TTCCEEEEEECCSCCSSHHHHHHHHHHGGGSCCCTTBCCEEEECCCTTCCEEEE
T ss_pred             HHhccCccceeecCCCeeEEEEEE--CCCCEEEEEEecccChHHHHHHHHHHHHHHhCCCCCEeeEEEEEcCCCeEEEEE
Confidence            457899999999999999999994  458899999987765544444444444556667899999998888889999999


Q ss_pred             EecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeeccCCCCCcccCC
Q 018699          126 DYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSGPWQDQG  205 (351)
Q Consensus       126 e~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~~~~~~~~~~  205 (351)
                      ||+++++|.+++.........+++..++.++.|++.||.|||++||+|+||||+||+++                 .++.
T Consensus       115 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~ivH~dlkp~Nil~~-----------------~~~~  177 (321)
T 2qkw_B          115 KYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYLHTRAIIHRDVKSINILLD-----------------ENFV  177 (321)
T ss_dssp             ECCTTCBTGGGSSSSCCCSCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCSTTEEEC-----------------TTCC
T ss_pred             EcCCCCcHHHHHhccCCCccccCHHHHHHHHHHHHHHHHHhcCCCeecCCCCHHHEEEC-----------------CCCC
Confidence            99999999998865322123589999999999999999999999999999999999998                 7788


Q ss_pred             eEEeecCCccccccCCCCccccccccCCCcccceeccCCCCCccchHhHHHHHHHHHHhCccccccccCCCCCc------
Q 018699          206 LCLVDWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQEKKPWKFQVDTYGLCAIVHMMLHNSYMEIEKKASPDGG------  279 (351)
Q Consensus       206 ~~l~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~p~~~~~~~~~~~------  279 (351)
                      ++|+|||++................||+.|+|||++.+..++.++|||||||++|+|++|..||....+.....      
T Consensus       178 ~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~p~~~~~~~~~~~~~~~~~  257 (321)
T 2qkw_B          178 PKITDFGISKKGTELDQTHLSTVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAV  257 (321)
T ss_dssp             EEECCCTTCEECSSSSCCCCBCCCEEETTTCCHHHHHHCBCCTHHHHHHHHHHHHHHHHCCTTCSCSSSSSCCCHHHHTH
T ss_pred             EEEeecccccccccccccccccccCCCccccCHHHhcCCCCCcccchHhHHHHHHHHHhCCCcccccCcHHHHHHHHHhh
Confidence            99999999875432222223344568999999999988889999999999999999999999997654331110      


Q ss_pred             -------ee----eecCcchhhhhHHHHHHHHHHHHhcCCCCCChHHHHHHHHH
Q 018699          280 -------LV----YLPKLSFKRYWKVELWKSLFTNLLNMSSGNDKEVLQNLQKS  322 (351)
Q Consensus       280 -------~~----~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~~~  322 (351)
                             ..    .......+.... ..+.+++.+||+.||++||++.|++.+.
T Consensus       258 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~l~~li~~~l~~dP~~Rps~~ell~~L  310 (321)
T 2qkw_B          258 ESHNNGQLEQIVDPNLADKIRPESL-RKFGDTAVKCLALSSEDRPSMGDVLWKL  310 (321)
T ss_dssp             HHHTTTCCCSSSSSSCTTCSCHHHH-HHHHHHHHHHTCSSGGGSCCHHHHHHHH
T ss_pred             hccccccHHHhcChhhccccCHHHH-HHHHHHHHHHcCCCcccCcCHHHHHHHH
Confidence                   00    001112223333 7899999999999999999999999764

>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}

Probab=100.00  E-value=4.5e-43  Score=317.35  Aligned_cols=266  Identities=13%  Similarity=0.104  Sum_probs=200.1

Q ss_pred             EEEcCeeEEEEEEeeccCceEEEEEEecC--CCCceEEEEecCCCCChH-HHHHHHHHhhhccccccccccceeeecccC
Q 018699           43 IEIGGKKYQIKGCAGQGGFAKVFKAYVNG--DPEDVVALKIQKPAFPWE-FYMYRQLDQRISGRERSSFGFAHRIHLYSD  119 (351)
Q Consensus        43 ~~i~~~~Y~i~~~lg~G~~g~V~~a~~~~--~~~~~vaiK~~~~~~~~e-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  119 (351)
                      .++..++|++.+.||+|+||+||+|.+..  ..+..||||++....... ...+......+....|++++.+..++..++
T Consensus        44 ~~~~~~~y~i~~~lG~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~  123 (325)
T 3kul_A           44 REIEASRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRLEGVVTRGR  123 (325)
T ss_dssp             CBCCGGGEEEEEEEEETTTEEEEEEEECCTTSCCEEEEEEEECTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECGGG
T ss_pred             cccChhHeEEeeEEEeCCCcEEEEEEEecCCCCCceEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCC
Confidence            35667899999999999999999999522  234469999988654332 222222233345557889999999888888


Q ss_pred             eeEEEEEecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeeccCCCC
Q 018699          120 YSILVCDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSG  199 (351)
Q Consensus       120 ~~~lv~e~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~~~~  199 (351)
                      ..|+||||+++++|.+++...   +..+++..++.++.|++.||.|||++||+||||||+||+++               
T Consensus       124 ~~~lv~e~~~~~~L~~~l~~~---~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~---------------  185 (325)
T 3kul_A          124 LAMIVTEYMENGSLDTFLRTH---DGQFTIMQLVGMLRGVGAGMRYLSDLGYVHRDLAARNVLVD---------------  185 (325)
T ss_dssp             CCEEEEECCTTCBHHHHHHTT---TTCSCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEC---------------
T ss_pred             ccEEEeeCCCCCcHHHHHHhc---ccCCCHHHHHHHHHHHHHHHHHHHHCCeeCCCCCcceEEEC---------------
Confidence            999999999999999999764   46799999999999999999999999999999999999998               


Q ss_pred             CcccCCeEEeecCCccccccCCCC-ccccccccCCCcccceeccCCCCCccchHhHHHHHHHHHHh-CccccccccCCCC
Q 018699          200 PWQDQGLCLVDWGRGIDLHLFPDN-MEFEGDCRTSGFRCIEMQEKKPWKFQVDTYGLCAIVHMMLH-NSYMEIEKKASPD  277 (351)
Q Consensus       200 ~~~~~~~~l~Dfg~a~~~~~~~~~-~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~-g~~p~~~~~~~~~  277 (351)
                        .++.++|+|||++......... .......+|+.|+|||++.+..++.++|||||||++|+|++ |..||........
T Consensus       186 --~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~~  263 (325)
T 3kul_A          186 --SNLVCKVSDFGLSRVLEDDPDAAYTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERPYWNMTNRDV  263 (325)
T ss_dssp             --TTCCEEECCCSSCEECC----CCEECC---CCGGGSCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTSCHHHH
T ss_pred             --CCCCEEECCCCcccccccCccceeeccCCCCcccccCHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCcccCCHHHH
Confidence              7788999999998754322211 12223345778999999998889999999999999999999 9999865432210


Q ss_pred             Cc-eeeecCcchhhhhHHHHHHHHHHHHhcCCCCCChHHHHHHHHHHHHHHhhC
Q 018699          278 GG-LVYLPKLSFKRYWKVELWKSLFTNLLNMSSGNDKEVLQNLQKSFQDYLCSN  330 (351)
Q Consensus       278 ~~-~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~~~~~~~~~~~  330 (351)
                      .. .......+.+..++ +.+.+||.+||..||.+||++.+++.. ++..+...
T Consensus       264 ~~~~~~~~~~~~~~~~~-~~l~~li~~~l~~dp~~Rps~~eil~~-L~~l~~~~  315 (325)
T 3kul_A          264 ISSVEEGYRLPAPMGCP-HALHQLMLDCWHKDRAQRPRFSQIVSV-LDALIRSP  315 (325)
T ss_dssp             HHHHHTTCCCCCCTTCC-HHHHHHHHHHTCSSGGGSCCHHHHHHH-HHHHHHSC
T ss_pred             HHHHHcCCCCCCCCCcC-HHHHHHHHHHccCChhhCcCHHHHHHH-HHHHHhCc
Confidence            00 00011222233344 789999999999999999999998764 34444433

>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A

Probab=100.00  E-value=1e-42  Score=319.85  Aligned_cols=251  Identities=20%  Similarity=0.211  Sum_probs=194.7

Q ss_pred             eeEEEEEEeeccCceEEEEEEecCCCCceEEEEecCCCCCh----H----HHHHHHHHhhhccc-cccccccceeeeccc
Q 018699           48 KKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFPW----E----FYMYRQLDQRISGR-ERSSFGFAHRIHLYS  118 (351)
Q Consensus        48 ~~Y~i~~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~~~----e----~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~  118 (351)
                      ++|++.+.||+|++|.||+|+ +..+|+.||||++......    .    ...+.......... .+++++.+..++...
T Consensus        94 ~~y~~~~~lg~G~~g~Vy~a~-~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~  172 (365)
T 2y7j_A           94 QKYDPKDVIGRGVSSVVRRCV-HRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHPHIITLIDSYESS  172 (365)
T ss_dssp             HHEEEEEEEEECSSEEEEEEE-ETTTCCEEEEEEEETTSSCCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEEBS
T ss_pred             hhcccceEEecCCCEEEEEEE-ECCCCcEEEEEEEEccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeEEEEEEeeC
Confidence            679999999999999999999 5667899999998754321    1    11111111112222 578888888888888


Q ss_pred             CeeEEEEEecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeeccCCC
Q 018699          119 DYSILVCDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRS  198 (351)
Q Consensus       119 ~~~~lv~e~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~~~  198 (351)
                      +..|+||||+++++|.+++..    +..+++..++.++.||+.||.|||+.||+|+||+|+||+++              
T Consensus       173 ~~~~lv~e~~~g~~L~~~l~~----~~~l~~~~~~~i~~qi~~~L~~LH~~gi~H~Dlkp~NIl~~--------------  234 (365)
T 2y7j_A          173 SFMFLVFDLMRKGELFDYLTE----KVALSEKETRSIMRSLLEAVSFLHANNIVHRDLKPENILLD--------------  234 (365)
T ss_dssp             SEEEEEECCCTTCBHHHHHHH----HSSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEC--------------
T ss_pred             CEEEEEEEeCCCCcHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEC--------------
Confidence            999999999999999999986    36799999999999999999999999999999999999999              


Q ss_pred             CCcccCCeEEeecCCccccccCCCCccccccccCCCcccceeccC------CCCCccchHhHHHHHHHHHHhCccccccc
Q 018699          199 GPWQDQGLCLVDWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQEK------KPWKFQVDTYGLCAIVHMMLHNSYMEIEK  272 (351)
Q Consensus       199 ~~~~~~~~~l~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~------~~~~~~~DiwslG~il~~l~~g~~p~~~~  272 (351)
                         .++.++|+|||++....   .........||+.|+|||++.+      ..++.++|||||||++|+|++|..||...
T Consensus       235 ---~~~~ikl~DfG~~~~~~---~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~  308 (365)
T 2y7j_A          235 ---DNMQIRLSDFGFSCHLE---PGEKLRELCGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPPFWHR  308 (365)
T ss_dssp             ---TTCCEEECCCTTCEECC---TTCCBCCCCSCGGGCCHHHHHHTTCTTSCCBCTTHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred             ---CCCCEEEEecCcccccC---CCcccccCCCCCCccChhhccccccccCcCCCchhhHHhHHHHHHHHHHCCCCCCCC
Confidence               77889999999886543   2233455679999999999853      35788999999999999999999999653


Q ss_pred             cCCCCCceeeecC--cchh--hhhHHHHHHHHHHHHhcCCCCCChHHHHHHHHHHH
Q 018699          273 KASPDGGLVYLPK--LSFK--RYWKVELWKSLFTNLLNMSSGNDKEVLQNLQKSFQ  324 (351)
Q Consensus       273 ~~~~~~~~~~~~~--~~~~--~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~~~~~  324 (351)
                      .............  ...+  ...+ ..+.+||.+||..||++||++.++++|||.
T Consensus       309 ~~~~~~~~i~~~~~~~~~~~~~~~~-~~~~~li~~~L~~dP~~Rps~~ell~hp~f  363 (365)
T 2y7j_A          309 RQILMLRMIMEGQYQFSSPEWDDRS-STVKDLISRLLQVDPEARLTAEQALQHPFF  363 (365)
T ss_dssp             SHHHHHHHHHHTCCCCCHHHHSSSC-HHHHHHHHHHSCSSTTTSCCHHHHHHSGGG
T ss_pred             CHHHHHHHHHhCCCCCCCcccccCC-HHHHHHHHHHcCCChhHCcCHHHHhcCccc
Confidence            3210000000000  0111  1123 679999999999999999999999999873

>4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*

Probab=100.00  E-value=4.3e-43  Score=308.94  Aligned_cols=255  Identities=13%  Similarity=0.073  Sum_probs=199.5

Q ss_pred             EEEcCeeEEEEEEeeccCceEEEEEEecCCCCceEEEEecCCCCChHHHHHHHHHhhhccccccccccceeeecccCeeE
Q 018699           43 IEIGGKKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFPWEFYMYRQLDQRISGRERSSFGFAHRIHLYSDYSI  122 (351)
Q Consensus        43 ~~i~~~~Y~i~~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  122 (351)
                      +.+..++|++.+.||+|+||+||+|.+ . +++.||+|++......+....+++ .......|++++.+..++...+..+
T Consensus         5 ~~i~~~~y~~~~~lg~G~~g~V~~~~~-~-~~~~vavK~~~~~~~~~~~~~~E~-~~l~~l~h~~i~~~~~~~~~~~~~~   81 (269)
T 4hcu_A            5 WVIDPSELTFVQEIGSGQFGLVHLGYW-L-NKDKVAIKTIREGAMSEEDFIEEA-EVMMKLSHPKLVQLYGVCLEQAPIC   81 (269)
T ss_dssp             CBCCGGGEEEEEEEEECSSCEEEEEEE-T-TTEEEEEEEECTTSBCHHHHHHHH-HHHHTCCCTTBCCEEEEECSSSSEE
T ss_pred             EEeChhhceeeheecCCCccEEEEEEe-c-CCCeEEEEEecccccCHHHHHHHH-HHHHhCCCCCEeeEEEEEecCCceE
Confidence            456678999999999999999999995 3 467899999987655444333333 3334456888998888888888999


Q ss_pred             EEEEecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeeccCCCCCcc
Q 018699          123 LVCDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSGPWQ  202 (351)
Q Consensus       123 lv~e~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~~~~~~~  202 (351)
                      +||||+++++|.+++...   ...+++..++.++.|++.|+.|||++||+|+||||+||+++                 .
T Consensus        82 lv~e~~~~~~L~~~l~~~---~~~~~~~~~~~i~~~i~~~l~~lH~~~i~H~dikp~Nil~~-----------------~  141 (269)
T 4hcu_A           82 LVFEFMEHGCLSDYLRTQ---RGLFAAETLLGMCLDVCEGMAYLEEACVIHRDLAARNCLVG-----------------E  141 (269)
T ss_dssp             EEEECCTTCBHHHHHHTT---TTCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEC-----------------G
T ss_pred             EEEEeCCCCcHHHHHHhc---CcccCHHHHHHHHHHHHHHHHHHHhCCeecCCcchheEEEc-----------------C
Confidence            999999999999999764   45789999999999999999999999999999999999998                 6


Q ss_pred             cCCeEEeecCCccccccCCCCccccccccCCCcccceeccCCCCCccchHhHHHHHHHHHHh-CccccccccCCCCCcee
Q 018699          203 DQGLCLVDWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQEKKPWKFQVDTYGLCAIVHMMLH-NSYMEIEKKASPDGGLV  281 (351)
Q Consensus       203 ~~~~~l~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~-g~~p~~~~~~~~~~~~~  281 (351)
                      ++.++|+|||++...... .........+++.|+|||++.+..++.++||||||+++|+|++ |..||............
T Consensus       142 ~~~~kl~Dfg~~~~~~~~-~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~~g~~p~~~~~~~~~~~~~  220 (269)
T 4hcu_A          142 NQVIKVSDFGMTRFVLDD-QYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDI  220 (269)
T ss_dssp             GGCEEECCTTGGGGBCCH-HHHSTTSTTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHH
T ss_pred             CCCEEecccccccccccc-ccccccCcccccccCCHHHhcCCCCCchhhhHHHHHHHHHHhcCCCCCCCCCCHHHHHHHH
Confidence            788999999998643211 0111233456778999999998889999999999999999999 89998654322100000


Q ss_pred             -eecCcchhhhhHHHHHHHHHHHHhcCCCCCChHHHHHHHHH
Q 018699          282 -YLPKLSFKRYWKVELWKSLFTNLLNMSSGNDKEVLQNLQKS  322 (351)
Q Consensus       282 -~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~~~  322 (351)
                       .......+...+ +.+.++|.+||+.||.+||++.+++++.
T Consensus       221 ~~~~~~~~~~~~~-~~~~~li~~~l~~~p~~Rps~~~ll~~l  261 (269)
T 4hcu_A          221 STGFRLYKPRLAS-THVYQIMNHCWRERPEDRPAFSRLLRQL  261 (269)
T ss_dssp             HTTCCCCCCTTSC-HHHHHHHHHHTCSSGGGSCCHHHHHHHH
T ss_pred             hcCccCCCCCcCC-HHHHHHHHHHccCCcccCcCHHHHHHHH
Confidence             001122223334 7899999999999999999999999873

>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ...

Probab=100.00  E-value=2.8e-42  Score=312.63  Aligned_cols=250  Identities=18%  Similarity=0.258  Sum_probs=190.7

Q ss_pred             EcCeeEEEEEEeeccCceEEEEEEecCCCCceEEEEecCCCCChHHHHHHHHHhhhccccccccccceeeecc--cCeeE
Q 018699           45 IGGKKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFPWEFYMYRQLDQRISGRERSSFGFAHRIHLY--SDYSI  122 (351)
Q Consensus        45 i~~~~Y~i~~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~  122 (351)
                      ...++|++.+.||+|+||+||+|+ +..+++.||+|++........  .+++........+++++.+..+...  ....+
T Consensus        33 ~~~~~y~~~~~lg~G~~g~V~~~~-~~~~~~~vavK~~~~~~~~~~--~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~  109 (330)
T 3nsz_A           33 GNQDDYQLVRKLGRGKYSEVFEAI-NITNNEKVVVKILKPVKKKKI--KREIKILENLRGGPNIITLADIVKDPVSRTPA  109 (330)
T ss_dssp             EEGGGEEEEEEEEECSSEEEEEEE-ETTTCCEEEEEEECSCCHHHH--HHHHHHHHHHTTSTTBCCEEEEEECTTTCCEE
T ss_pred             cCCCceEEEEEecccCCeEEEEEE-ECCCCcEEEEEEecccchHHH--HHHHHHHHHcCCCCCEEEeeeeeccCCCCceE
Confidence            346899999999999999999999 567889999999876543222  2222211112246788887777765  66789


Q ss_pred             EEEEecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeeccCCCCCcc
Q 018699          123 LVCDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSGPWQ  202 (351)
Q Consensus       123 lv~e~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~~~~~~~  202 (351)
                      +||||+.+++|.+++.       .+++..++.++.|++.||.|||++||+||||||+||+++                 .
T Consensus       110 lv~e~~~~~~l~~~~~-------~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dikp~Nil~~-----------------~  165 (330)
T 3nsz_A          110 LVFEHVNNTDFKQLYQ-------TLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMID-----------------H  165 (330)
T ss_dssp             EEEECCCCCCHHHHGG-------GCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEE-----------------T
T ss_pred             EEEeccCchhHHHHHH-------hCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEEc-----------------C
Confidence            9999999999998874       378889999999999999999999999999999999998                 4


Q ss_pred             cC-CeEEeecCCccccccCCCCccccccccCCCcccceeccC-CCCCccchHhHHHHHHHHHHhCccccccccCCC----
Q 018699          203 DQ-GLCLVDWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQEK-KPWKFQVDTYGLCAIVHMMLHNSYMEIEKKASP----  276 (351)
Q Consensus       203 ~~-~~~l~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~~DiwslG~il~~l~~g~~p~~~~~~~~----  276 (351)
                      ++ .++|+|||++....   .........+++.|+|||++.+ ..++.++|||||||++|+|++|..||.......    
T Consensus       166 ~~~~~kl~Dfg~a~~~~---~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~p~~~~~~~~~~l~  242 (330)
T 3nsz_A          166 EHRKLRLIDWGLAEFYH---PGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLV  242 (330)
T ss_dssp             TTTEEEECCCTTCEECC---TTCCCCSCCSCGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHTCSSSSCCSSHHHHHH
T ss_pred             CCCEEEEEeCCCceEcC---CCCccccccccccccChhhhcCCCcCCchhhHHHHHHHHHHHHhCCCCcccCCchHHHHH
Confidence            44 69999999986433   2233455678999999999877 678999999999999999999999984321100    


Q ss_pred             ----------------------------------CCceeeecCcchhhhhHHHHHHHHHHHHhcCCCCCChHHHHHHHHH
Q 018699          277 ----------------------------------DGGLVYLPKLSFKRYWKVELWKSLFTNLLNMSSGNDKEVLQNLQKS  322 (351)
Q Consensus       277 ----------------------------------~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~~~  322 (351)
                                                        ...+........+...+ +.+.+||.+||++||.+|||+.|+|+||
T Consensus       243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~li~~~L~~dP~~Rpta~e~l~hp  321 (330)
T 3nsz_A          243 RIAKVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVS-PEALDFLDKLLRYDHQSRLTAREAMEHP  321 (330)
T ss_dssp             HHHHHHCHHHHHHHHHHTTCCCCTHHHHHHCCCCCCCGGGGCCTTTGGGCC-HHHHHHHHTTSCSSGGGSCCHHHHHTSG
T ss_pred             HHHHhcCCchhhhHHHHhccccccchhhhhhhccccchhhhccccccccCC-HHHHHHHHHHhcCCcccCCCHHHHhcCc
Confidence                                              00000000111111233 7899999999999999999999999998


Q ss_pred             HHH
Q 018699          323 FQD  325 (351)
Q Consensus       323 ~~~  325 (351)
                      |..
T Consensus       322 ~f~  324 (330)
T 3nsz_A          322 YFY  324 (330)
T ss_dssp             GGT
T ss_pred             cHh
Confidence            643

>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A*

Probab=100.00  E-value=6e-43  Score=307.74  Aligned_cols=253  Identities=14%  Similarity=0.058  Sum_probs=198.0

Q ss_pred             EEcCeeEEEEEEeeccCceEEEEEEecCCCCceEEEEecCCCCChHHHHHHHHHhhhccccccccccceeeecccCeeEE
Q 018699           44 EIGGKKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFPWEFYMYRQLDQRISGRERSSFGFAHRIHLYSDYSIL  123 (351)
Q Consensus        44 ~i~~~~Y~i~~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  123 (351)
                      ++..++|++.+.||+|+||+||+|.+  .++..||+|++...........+++. ......|++++.+..++...+..++
T Consensus         4 ~l~~~~y~~~~~lg~G~~g~V~~~~~--~~~~~vavK~~~~~~~~~~~~~~E~~-~l~~l~h~~i~~~~~~~~~~~~~~l   80 (268)
T 3sxs_A            4 ELKREEITLLKELGSGQFGVVKLGKW--KGQYDVAVKMIKEGSMSEDEFFQEAQ-TMMKLSHPKLVKFYGVCSKEYPIYI   80 (268)
T ss_dssp             BCCGGGEEEEEEEEEETTEEEEEEEE--TTTEEEEEEEECBTTBCHHHHHHHHH-HHHHCCCTTBCCEEEEECSSSSEEE
T ss_pred             EechhheeeeeeeccCCCceEEEEEe--cCceeEEEEEeccCCCcHHHHHHHHH-HHHhCCCCCEeeEEEEEccCCceEE
Confidence            45678999999999999999999985  35678999998876554444333332 2334457888888888888889999


Q ss_pred             EEEecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeeccCCCCCccc
Q 018699          124 VCDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSGPWQD  203 (351)
Q Consensus       124 v~e~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~~~~~~~~  203 (351)
                      ||||+++++|.+++...   +..+++..++.++.|++.|++|||++||+|+||||+||+++                 .+
T Consensus        81 v~e~~~~~~L~~~l~~~---~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dikp~Nil~~-----------------~~  140 (268)
T 3sxs_A           81 VTEYISNGCLLNYLRSH---GKGLEPSQLLEMCYDVCEGMAFLESHQFIHRDLAARNCLVD-----------------RD  140 (268)
T ss_dssp             EEECCTTCBHHHHHHHH---GGGCCHHHHHHHHHHHHHHHHHHHHTTEEESSCSGGGEEEC-----------------TT
T ss_pred             EEEccCCCcHHHHHHHc---CCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCcCcceEEEC-----------------CC
Confidence            99999999999999875   45699999999999999999999999999999999999998                 77


Q ss_pred             CCeEEeecCCccccccCCCCccccccccCCCcccceeccCCCCCccchHhHHHHHHHHHHh-CccccccccCCCCCc-ee
Q 018699          204 QGLCLVDWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQEKKPWKFQVDTYGLCAIVHMMLH-NSYMEIEKKASPDGG-LV  281 (351)
Q Consensus       204 ~~~~l~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~-g~~p~~~~~~~~~~~-~~  281 (351)
                      +.++|+|||.+...... .........+++.|+|||.+.+..++.++||||||+++|+|++ |..||.......... ..
T Consensus       141 ~~~~l~Dfg~~~~~~~~-~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~  219 (268)
T 3sxs_A          141 LCVKVSDFGMTRYVLDD-QYVSSVGTKFPVKWSAPEVFHYFKYSSKSDVWAFGILMWEVFSLGKMPYDLYTNSEVVLKVS  219 (268)
T ss_dssp             CCEEECCTTCEEECCTT-CEEECCSCCCCGGGCCHHHHHHSEEETTHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHHHHH
T ss_pred             CCEEEccCccceecchh-hhhcccCCCcCcccCCHHHHhccCCchhhhhHHHHHHHHHHHcCCCCCccccChHHHHHHHH
Confidence            88999999998653211 1112233456678999999988888999999999999999999 999986433220000 00


Q ss_pred             eecCcchhhhhHHHHHHHHHHHHhcCCCCCChHHHHHHHH
Q 018699          282 YLPKLSFKRYWKVELWKSLFTNLLNMSSGNDKEVLQNLQK  321 (351)
Q Consensus       282 ~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~~  321 (351)
                      .......+...+ +.+.++|.+||..||.+||++.+++++
T Consensus       220 ~~~~~~~~~~~~-~~l~~li~~~l~~~p~~Rps~~~ll~~  258 (268)
T 3sxs_A          220 QGHRLYRPHLAS-DTIYQIMYSCWHELPEKRPTFQQLLSS  258 (268)
T ss_dssp             TTCCCCCCTTSC-HHHHHHHHHTTCSSGGGSCCHHHHHHH
T ss_pred             cCCCCCCCCcCh-HHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence            011112222233 789999999999999999999999987

>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ...

Probab=100.00  E-value=2.6e-42  Score=317.97  Aligned_cols=251  Identities=19%  Similarity=0.234  Sum_probs=184.8

Q ss_pred             CeeEEEEEEeeccCceEEEEEEecCCCCceEEEEecCCCCChHHH--HHHHHHhhhccccccccccceeeecccC-----
Q 018699           47 GKKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFPWEFY--MYRQLDQRISGRERSSFGFAHRIHLYSD-----  119 (351)
Q Consensus        47 ~~~Y~i~~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~~~e~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----  119 (351)
                      .++|++.+.||+|+||+||+|+ +..+++.||||++.........  .............|++++....++...+     
T Consensus        24 ~~~y~~~~~lG~G~~g~V~~~~-~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~  102 (371)
T 2xrw_A           24 LKRYQNLKPIGSGAQGIVCAAY-DAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEF  102 (371)
T ss_dssp             ETTEEEEEEEEECSSEEEEEEE-ETTTTEEEEEEEEECTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSCCSTTTC
T ss_pred             hhheeEeeeeEecCCEEEEEEE-ECCCCceEEEEEeccccCChHHHHHHHHHHHHHHhcCCCCccceEEeeccccccccc
Confidence            4689999999999999999999 5778899999998765433221  1112222334456788888877765443     


Q ss_pred             -eeEEEEEecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeeccCCC
Q 018699          120 -YSILVCDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRS  198 (351)
Q Consensus       120 -~~~lv~e~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~~~  198 (351)
                       ..|+||||+. ++|.+.+.      ..+++..+..++.||+.||.|||++||+||||||+||+++              
T Consensus       103 ~~~~lv~e~~~-~~l~~~~~------~~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dlkp~NIl~~--------------  161 (371)
T 2xrw_A          103 QDVYIVMELMD-ANLCQVIQ------MELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVK--------------  161 (371)
T ss_dssp             CEEEEEEECCS-EEHHHHHH------SCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEC--------------
T ss_pred             cceEEEEEcCC-CCHHHHHh------hccCHHHHHHHHHHHHHHHHHHHHCCeecccCCHHHEEEc--------------
Confidence             7899999995 58888774      3588999999999999999999999999999999999999              


Q ss_pred             CCcccCCeEEeecCCccccccCCCCccccccccCCCcccceeccCCCCCccchHhHHHHHHHHHHhCccccccccCCCC-
Q 018699          199 GPWQDQGLCLVDWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQEKKPWKFQVDTYGLCAIVHMMLHNSYMEIEKKASPD-  277 (351)
Q Consensus       199 ~~~~~~~~~l~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~p~~~~~~~~~-  277 (351)
                         .++.+||+|||++....   .........||+.|+|||++.+..++.++|||||||++|+|++|..||........ 
T Consensus       162 ---~~~~~kl~Dfg~a~~~~---~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~  235 (371)
T 2xrw_A          162 ---SDCTLKILDFGLARTAG---TSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQW  235 (371)
T ss_dssp             ---TTSCEEECCCCC-------------------CTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHH
T ss_pred             ---CCCCEEEEEeecccccc---cccccCCceecCCccCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCHHHHH
Confidence               77889999999986432   12223456789999999999999999999999999999999999999965432100 


Q ss_pred             -------Cc-------------------------e---------eeecCcchhhhhHHHHHHHHHHHHhcCCCCCChHHH
Q 018699          278 -------GG-------------------------L---------VYLPKLSFKRYWKVELWKSLFTNLLNMSSGNDKEVL  316 (351)
Q Consensus       278 -------~~-------------------------~---------~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~  316 (351)
                             +.                         .         ........+...+ ..+++||.+||..||++|||+.
T Consensus       236 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~li~~mL~~dP~~R~t~~  314 (371)
T 2xrw_A          236 NKVIEQLGTPCPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKA-SQARDLLSKMLVIDASKRISVD  314 (371)
T ss_dssp             HHHHC-CCCCCHHHHTTSCHHHHHHHHSSCCCCCCCHHHHSCGGGSCCSSHHHHHHH-HHHHHHHHHHSCSSGGGSCCHH
T ss_pred             HHHHHHhCCCCHHHHHHhhhHHHHHHhhCccccccchhhhcccccCccccccccccc-HHHHHHHHHHCcCChhhCCCHH
Confidence                   00                         0         0000000111113 7899999999999999999999


Q ss_pred             HHHHHHHHHH
Q 018699          317 QNLQKSFQDY  326 (351)
Q Consensus       317 e~l~~~~~~~  326 (351)
                      |+|+|||...
T Consensus       315 e~l~hp~~~~  324 (371)
T 2xrw_A          315 EALQHPYINV  324 (371)
T ss_dssp             HHHHSHHHHT
T ss_pred             HHhCCcchhh
Confidence            9999998654

>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens}

Probab=100.00  E-value=2.4e-42  Score=313.57  Aligned_cols=267  Identities=15%  Similarity=0.127  Sum_probs=183.4

Q ss_pred             ccCCCcceEEEEcCeeEEEEEEeeccCceEEEEEEecCCCCceEEEEecCCCCChHHHHHHHHHhhhccc-cccccccce
Q 018699           34 LNNSSRNKTIEIGGKKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFPWEFYMYRQLDQRISGR-ERSSFGFAH  112 (351)
Q Consensus        34 ~~~~~~~~~~~i~~~~Y~i~~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~~~e~~~~~~~~~~~~~~-~~~~~~~~~  112 (351)
                      .........+++.+.+|++.+.||+|+||+||+|+ +..+++.||+|++..........+......+... .|++++.+.
T Consensus        14 ~~~~~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~-~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~~h~~iv~~~   92 (337)
T 3ll6_A           14 DQSDFVGQTVELGELRLRVRRVLAEGGFAFVYEAQ-DVGSGREYALKRLLSNEEEKNRAIIQEVCFMKKLSGHPNIVQFC   92 (337)
T ss_dssp             -CCSSTTCEEEETTEEEEEEEEEECCSSEEEEEEE-ETTTCCEEEEEEEEESSHHHHHHHHHHHHHHHHHTTSTTBCCEE
T ss_pred             hHHHhhcceeeccCceEEEEEEEccCCceEEEEEE-ECCCCcEEEEEEecCCchHHHHHHHHHHHHHHHhccCCChhhcc
Confidence            33445567899999999999999999999999999 5678899999988654332222222222222223 477887777


Q ss_pred             eee--------cccCeeEEEEEecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCC--ceecCCCCCcEE
Q 018699          113 RIH--------LYSDYSILVCDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVG--IIHGDFKPDNLL  182 (351)
Q Consensus       113 ~~~--------~~~~~~~lv~e~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~--i~H~dl~p~Nil  182 (351)
                      .+.        ......++||||+ +|+|.+++..... ...+++..++.++.||+.||.|||++|  |+|+||||+||+
T Consensus        93 ~~~~~~~~~~~~~~~~~~lv~e~~-~g~L~~~l~~~~~-~~~~~~~~~~~i~~qi~~~l~~LH~~~~~ivH~Dikp~NIl  170 (337)
T 3ll6_A           93 SAASIGKEESDTGQAEFLLLTELC-KGQLVEFLKKMES-RGPLSCDTVLKIFYQTCRAVQHMHRQKPPIIHRDLKVENLL  170 (337)
T ss_dssp             EEEEECTTTSTTSSEEEEEEEECC-SEEHHHHHHHHHT-TCSCCHHHHHHHHHHHHHHHHHHHTSSSCCBCCCCCGGGCE
T ss_pred             ccccccccccccCCceEEEEEEec-CCCHHHHHHHhhc-cCCCCHHHHHHHHHHHHHHHHHHHhCCCCEEEccCCcccEE
Confidence            665        3345689999999 5799998876432 457999999999999999999999999  999999999999


Q ss_pred             EeecCCcceeeccCCCCCcccCCeEEeecCCccccccCCCC----------ccccccccCCCcccceec---cCCCCCcc
Q 018699          183 IRYARDELTVLDHDRSGPWQDQGLCLVDWGRGIDLHLFPDN----------MEFEGDCRTSGFRCIEMQ---EKKPWKFQ  249 (351)
Q Consensus       183 l~~~~~~~~~~~~~~~~~~~~~~~~l~Dfg~a~~~~~~~~~----------~~~~~~~g~~~y~aPE~~---~~~~~~~~  249 (351)
                      ++                 .++.++|+|||++.........          .......||+.|+|||++   .+..++.+
T Consensus       171 ~~-----------------~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~  233 (337)
T 3ll6_A          171 LS-----------------NQGTIKLCDFGSATTISHYPDYSWSAQRRALVEEEITRNTTPMYRTPEIIDLYSNFPIGEK  233 (337)
T ss_dssp             EC-----------------TTSCEEBCCCTTCBCCSSCC-------------------------------CCTTSCSSHH
T ss_pred             EC-----------------CCCCEEEecCccceeccccCcccccccccccchhhccccCCCCcCChhhhhccccCCCChH
Confidence            99                 7778999999998754322211          011244689999999998   56678899


Q ss_pred             chHhHHHHHHHHHHhCccccccccCCCCCceeeecCcchhhhhHHHHHHHHHHHHhcCCCCCChHHHHHHHHHH
Q 018699          250 VDTYGLCAIVHMMLHNSYMEIEKKASPDGGLVYLPKLSFKRYWKVELWKSLFTNLLNMSSGNDKEVLQNLQKSF  323 (351)
Q Consensus       250 ~DiwslG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~~~~  323 (351)
                      +|||||||++|+|++|..||...........  ....+.+.... ..+.+||.+||+.||.+||++.|++++..
T Consensus       234 ~Dv~slG~il~el~~g~~p~~~~~~~~~~~~--~~~~~~~~~~~-~~~~~li~~~l~~~p~~Rps~~e~l~~l~  304 (337)
T 3ll6_A          234 QDIWALGCILYLLCFRQHPFEDGAKLRIVNG--KYSIPPHDTQY-TVFHSLIRAMLQVNPEERLSIAEVVHQLQ  304 (337)
T ss_dssp             HHHHHHHHHHHHHHHSSCCC--------------CCCCTTCCSS-GGGHHHHHHHSCSSGGGSCCHHHHHHHHH
T ss_pred             HhHHHHHHHHHHHHhCCCCCcchhHHHhhcC--cccCCcccccc-hHHHHHHHHHccCChhhCcCHHHHHHHHH
Confidence            9999999999999999999975443211110  01111112222 56889999999999999999999998753

>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II}

Probab=100.00  E-value=2.3e-42  Score=319.66  Aligned_cols=256  Identities=18%  Similarity=0.239  Sum_probs=193.0

Q ss_pred             EEcCeeEEEEEEeeccCceEEEEEEecCCCCceEEEEecCCCCC---hHHHHHHHHHhhhccccccccccceeeec----
Q 018699           44 EIGGKKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFP---WEFYMYRQLDQRISGRERSSFGFAHRIHL----  116 (351)
Q Consensus        44 ~i~~~~Y~i~~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~~---~e~~~~~~~~~~~~~~~~~~~~~~~~~~~----  116 (351)
                      +...++|++.+.||+|+||+||+|+ +..+|+.||||++..+..   .|...       +....|++++.+..++.    
T Consensus         3 ~~~~~~y~~~~~lG~G~fg~V~~a~-~~~~~~~vAiK~~~~~~~~~~~E~~i-------l~~l~hpnIv~l~~~~~~~~~   74 (383)
T 3eb0_A            3 ETSSKKYSLGKTLGTGSFGIVCEVF-DIESGKRFALKKVLQDPRYKNRELDI-------MKVLDHVNIIKLVDYFYTTGD   74 (383)
T ss_dssp             ---CTTEEEEEEEECC-CEEEEEEE-ETTTCCEEEEEEEECCTTSCCHHHHH-------HTTCCCTTBCCEEEEEEEC--
T ss_pred             ccccceEEEEEEEEeccCEEEEEEE-ECCCCCEEEEEEEecCcchHHHHHHH-------HHHcCCCCccchhheeeecCc
Confidence            4556799999999999999999999 577899999998765432   23322       23345777777766552    


Q ss_pred             ----------------------------------ccCeeEEEEEecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHH
Q 018699          117 ----------------------------------YSDYSILVCDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCI  162 (351)
Q Consensus       117 ----------------------------------~~~~~~lv~e~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~  162 (351)
                                                        ...+.++||||++ ++|.+.+......+..+++..++.++.||+.|
T Consensus        75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~a  153 (383)
T 3eb0_A           75 EEPKPPQPPDDHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYVP-DTLHKVLKSFIRSGRSIPMNLISIYIYQLFRA  153 (383)
T ss_dssp             -----------------------------------CCEEEEEECCCS-EEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHH
T ss_pred             ccccccccccccccccccccccccccccccccCCCceEEEEEEecCC-ccHHHHHHHHHhcCCCCCHHHHHHHHHHHHHH
Confidence                                              2345889999996 69998888765557889999999999999999


Q ss_pred             HHHHHHCCceecCCCCCcEEEeecCCcceeeccCCCCCcccCCeEEeecCCccccccCCCCccccccccCCCcccceecc
Q 018699          163 LESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSGPWQDQGLCLVDWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQE  242 (351)
Q Consensus       163 l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~~~~~~~~~~~~l~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~  242 (351)
                      |+|||++||+||||||+||+++.                .++.++|+|||++.....   ........+|+.|+|||++.
T Consensus       154 L~~LH~~gi~H~Dikp~Nil~~~----------------~~~~~kl~Dfg~a~~~~~---~~~~~~~~~t~~y~aPE~~~  214 (383)
T 3eb0_A          154 VGFIHSLGICHRDIKPQNLLVNS----------------KDNTLKLCDFGSAKKLIP---SEPSVAYICSRFYRAPELML  214 (383)
T ss_dssp             HHHHHTTTEECSCCCGGGEEEET----------------TTTEEEECCCTTCEECCT---TSCCCCCCCCSSCCCHHHHT
T ss_pred             HHHHHHCcCccCccCHHHEEEcC----------------CCCcEEEEECCCCcccCC---CCCCcCcccCCCccCHHHhc
Confidence            99999999999999999999983                246699999999975432   22334557899999999987


Q ss_pred             CC-CCCccchHhHHHHHHHHHHhCccccccccCCCC-------------------------CceeeecCc----chhhhh
Q 018699          243 KK-PWKFQVDTYGLCAIVHMMLHNSYMEIEKKASPD-------------------------GGLVYLPKL----SFKRYW  292 (351)
Q Consensus       243 ~~-~~~~~~DiwslG~il~~l~~g~~p~~~~~~~~~-------------------------~~~~~~~~~----~~~~~~  292 (351)
                      +. .++.++||||+||++|+|++|..||........                         ..+......    .++...
T Consensus       215 ~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  294 (383)
T 3eb0_A          215 GATEYTPSIDLWSIGCVFGELILGKPLFSGETSIDQLVRIIQIMGTPTKEQMIRMNPHYTEVRFPTLKAKDWRKILPEGT  294 (383)
T ss_dssp             TCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHHHCTTC--CCCCCCCCCCHHHHSCTTC
T ss_pred             CCCCCCcchhhhhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHhCcccccccCCccCcccHHhhCCCCC
Confidence            64 489999999999999999999999975432100                         000000000    112223


Q ss_pred             HHHHHHHHHHHHhcCCCCCChHHHHHHHHHHHHHHh
Q 018699          293 KVELWKSLFTNLLNMSSGNDKEVLQNLQKSFQDYLC  328 (351)
Q Consensus       293 ~~~~~~~li~~~L~~dP~~R~s~~e~l~~~~~~~~~  328 (351)
                      + +.+.+||.+||.+||.+|||+.|+++|||.+.+.
T Consensus       295 ~-~~~~~li~~~L~~dP~~R~t~~e~l~hp~f~~~~  329 (383)
T 3eb0_A          295 P-SLAIDLLEQILRYEPDLRINPYEAMAHPFFDHLR  329 (383)
T ss_dssp             C-HHHHHHHHHHCCSSGGGSCCHHHHHTSGGGHHHH
T ss_pred             C-HHHHHHHHHHccCChhhCCCHHHHhcCHHHHHHH
Confidence            3 7799999999999999999999999999865443

>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A*

Probab=100.00  E-value=1e-42  Score=311.85  Aligned_cols=259  Identities=18%  Similarity=0.136  Sum_probs=202.3

Q ss_pred             CeeEEEEEEeeccCceEEEEEEecCCCCceEEEEecCCCCC-hHHHHHHHHHhhhccccccccccceeeecccCeeEEEE
Q 018699           47 GKKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFP-WEFYMYRQLDQRISGRERSSFGFAHRIHLYSDYSILVC  125 (351)
Q Consensus        47 ~~~Y~i~~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~~-~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~  125 (351)
                      .++|++.+.||+|+||+||+|. +..+++.||+|++..... .....+...........++++.....++...+..++||
T Consensus        21 ~~~y~~~~~lg~G~~g~V~~~~-~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~   99 (303)
T 3a7i_A           21 EELFTKLEKIGKGSFGEVFKGI-DNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIM   99 (303)
T ss_dssp             GGTEEEEEEEEECSSSEEEEEE-ETTTCCEEEEEEEETTTCSTTHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred             HHHHHHhhhhcccCCeEEEEEE-ECCCCcEEEEEEecccccHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeEEEEE
Confidence            4679999999999999999999 567889999999865432 22222232233344557788888888888888999999


Q ss_pred             EecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeeccCCCCCcccCC
Q 018699          126 DYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSGPWQDQG  205 (351)
Q Consensus       126 e~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~~~~~~~~~~  205 (351)
                      ||+++++|.+++..     ..+++..++.++.|++.|+.|||++||+|+||+|+||+++                 .++.
T Consensus       100 e~~~~~~L~~~~~~-----~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nil~~-----------------~~~~  157 (303)
T 3a7i_A          100 EYLGGGSALDLLEP-----GPLDETQIATILREILKGLDYLHSEKKIHRDIKAANVLLS-----------------EHGE  157 (303)
T ss_dssp             ECCTTEEHHHHHTT-----SCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEC-----------------TTSC
T ss_pred             EeCCCCcHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCChheEEEC-----------------CCCC
Confidence            99999999999864     5789999999999999999999999999999999999998                 7788


Q ss_pred             eEEeecCCccccccCCCCccccccccCCCcccceeccCCCCCccchHhHHHHHHHHHHhCccccccccCCCCCce-eeec
Q 018699          206 LCLVDWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQEKKPWKFQVDTYGLCAIVHMMLHNSYMEIEKKASPDGGL-VYLP  284 (351)
Q Consensus       206 ~~l~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~p~~~~~~~~~~~~-~~~~  284 (351)
                      ++|+|||++......  ........|++.|+|||++.+..++.++||||||+++|+|++|..||........... ....
T Consensus       158 ~kl~Dfg~~~~~~~~--~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~  235 (303)
T 3a7i_A          158 VKLADFGVAGQLTDT--QIKRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELHPMKVLFLIPKNN  235 (303)
T ss_dssp             EEECCCTTCEECBTT--BCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSC
T ss_pred             EEEeecccceecCcc--ccccCccCCCcCccCHHHHhcCCCCchhhhHHHHHHHHHHccCCCCCCCcCHHHHHHHhhcCC
Confidence            999999998654321  2223455789999999999988899999999999999999999999865332100000 0011


Q ss_pred             CcchhhhhHHHHHHHHHHHHhcCCCCCChHHHHHHHHHHHHHHhhCh
Q 018699          285 KLSFKRYWKVELWKSLFTNLLNMSSGNDKEVLQNLQKSFQDYLCSNP  331 (351)
Q Consensus       285 ~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~~~~~~~~~~~~  331 (351)
                      ....+..++ ..+.+||.+||..||.+||++.++++|+|...-....
T Consensus       236 ~~~~~~~~~-~~l~~li~~~l~~dp~~Rps~~~ll~~~~~~~~~~~~  281 (303)
T 3a7i_A          236 PPTLEGNYS-KPLKEFVEACLNKEPSFRPTAKELLKHKFILRNAKKT  281 (303)
T ss_dssp             CCCCCSSCC-HHHHHHHHHHCCSSGGGSCCHHHHTTCHHHHHHCCCG
T ss_pred             CCCCccccC-HHHHHHHHHHcCCChhhCcCHHHHhhChhhhcCCCcc
Confidence            112222334 7899999999999999999999999998754433333

>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A*

Probab=100.00  E-value=7.7e-43  Score=316.93  Aligned_cols=269  Identities=16%  Similarity=0.114  Sum_probs=193.8

Q ss_pred             CeeEEEEEEeeccCceEEEEEEecCCCCceEEEEecCCCCC------hHHHHHHHHHhhhccccccccccceeeecccCe
Q 018699           47 GKKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFP------WEFYMYRQLDQRISGRERSSFGFAHRIHLYSDY  120 (351)
Q Consensus        47 ~~~Y~i~~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~~------~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  120 (351)
                      .++|++.+.||+|+||+||+|.+...+++.||+|++.....      .|...++.+.+.. ...+.+++....++...+.
T Consensus        13 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~e~~~l~~l~~~~-~~~~~~i~~~~~~~~~~~~   91 (339)
T 1z57_A           13 SARYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNVDRYCEAARSEIQVLEHLNTTD-PNSTFRCVQMLEWFEHHGH   91 (339)
T ss_dssp             TTTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSSHHHHHHHHHHHHHHHHHHHHC-TTCTTCBCCEEEEEEETTE
T ss_pred             cCceEEEEEEecCCCeEEEEEEecCCCCcEEEEEEEecCCchhHHHHHHHHHHHHhhhcC-CCCceeeEeeecccccCCc
Confidence            67999999999999999999995466789999999875422      1233333333321 1122345666666777889


Q ss_pred             eEEEEEecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeecc--CCC
Q 018699          121 SILVCDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDH--DRS  198 (351)
Q Consensus       121 ~~lv~e~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~--~~~  198 (351)
                      .++||||+ +++|.+++....  ...+++..++.++.|++.||.|||++||+|+||||+||+++..+........  ...
T Consensus        92 ~~lv~e~~-~~~l~~~l~~~~--~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~~~~~~~~~  168 (339)
T 1z57_A           92 ICIVFELL-GLSTYDFIKENG--FLPFRLDHIRKMAYQICKSVNFLHSNKLTHTDLKPENILFVQSDYTEAYNPKIKRDE  168 (339)
T ss_dssp             EEEEEECC-CCBHHHHHHHTT--TCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESCCCEEEEEC----CEE
T ss_pred             EEEEEcCC-CCCHHHHHHhcC--CCCCcHHHHHHHHHHHHHHHHHHHHCCCcCCCCCHHHEEEeccccccccCCcccccc
Confidence            99999999 899999998742  2368899999999999999999999999999999999999843211000000  000


Q ss_pred             CCcccCCeEEeecCCccccccCCCCccccccccCCCcccceeccCCCCCccchHhHHHHHHHHHHhCccccccccCCCCC
Q 018699          199 GPWQDQGLCLVDWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQEKKPWKFQVDTYGLCAIVHMMLHNSYMEIEKKASPDG  278 (351)
Q Consensus       199 ~~~~~~~~~l~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~p~~~~~~~~~~  278 (351)
                      ....++.++|+|||++....     .......||+.|+|||++.+..++.++|||||||++|+|++|..||.........
T Consensus       169 ~~~~~~~~kl~Dfg~~~~~~-----~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~  243 (339)
T 1z57_A          169 RTLINPDIKVVDFGSATYDD-----EHHSTLVSTRHYRAPEVILALGWSQPCDVWSIGCILIEYYLGFTVFPTHDSKEHL  243 (339)
T ss_dssp             EEESCCCEEECCCSSCEETT-----SCCCSSCSCGGGCCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCSCHHHHH
T ss_pred             ccccCCCceEeeCcccccCc-----cccccccCCccccChHHhhCCCCCcchhhHHHHHHHHHHHhCCCCCCCCChHHHH
Confidence            00015679999999986432     1234457899999999999989999999999999999999999998643321000


Q ss_pred             c---------------------------eeeecC-----------------cchhhhhHHHHHHHHHHHHhcCCCCCChH
Q 018699          279 G---------------------------LVYLPK-----------------LSFKRYWKVELWKSLFTNLLNMSSGNDKE  314 (351)
Q Consensus       279 ~---------------------------~~~~~~-----------------~~~~~~~~~~~~~~li~~~L~~dP~~R~s  314 (351)
                      .                           ..+...                 ...+...+ +.+.+||.+||+.||.+|||
T Consensus       244 ~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~l~~li~~~L~~dP~~Rpt  322 (339)
T 1z57_A          244 AMMERILGPLPKHMIQKTRKRKYFHHDRLDWDEHSSAGRYVSRACKPLKEFMLSQDVEH-ERLFDLIQKMLEYDPAKRIT  322 (339)
T ss_dssp             HHHHHHHCSCCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHH-HHHHHHHHHHTCSSTTTSCC
T ss_pred             HHHHHHhCCCCHHHHhhccchhHHhhccccccccccccchhhhcCcchhhhcccchhhH-HHHHHHHHHHhCcCcccccC
Confidence            0                           000000                 00011112 67899999999999999999


Q ss_pred             HHHHHHHHHHH
Q 018699          315 VLQNLQKSFQD  325 (351)
Q Consensus       315 ~~e~l~~~~~~  325 (351)
                      +.|+++|||..
T Consensus       323 ~~ell~hp~f~  333 (339)
T 1z57_A          323 LREALKHPFFD  333 (339)
T ss_dssp             HHHHTTSGGGG
T ss_pred             HHHHhcCHHHH
Confidence            99999998754

>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A*

Probab=100.00  E-value=5.5e-43  Score=320.11  Aligned_cols=255  Identities=22%  Similarity=0.183  Sum_probs=190.4

Q ss_pred             CeeEEEEEEeeccCceEEEEEEecCCCCceEEEEecCCCCChH---HHHHHHHHhhhccccccccccceeeecc------
Q 018699           47 GKKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFPWE---FYMYRQLDQRISGRERSSFGFAHRIHLY------  117 (351)
Q Consensus        47 ~~~Y~i~~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~~~e---~~~~~~~~~~~~~~~~~~~~~~~~~~~~------  117 (351)
                      .++|++.+.||+|+||+||+|+ +..+|+.||+|++......+   ....+++ .......+++++.+..++..      
T Consensus        16 ~~~y~~~~~lg~G~~g~V~~~~-~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~-~~l~~l~h~~iv~~~~~~~~~~~~~~   93 (351)
T 3mi9_A           16 VSKYEKLAKIGQGTFGEVFKAR-HRKTGQKVALKKVLMENEKEGFPITALREI-KILQLLKHENVVNLIEICRTKASPYN   93 (351)
T ss_dssp             GGGEEEEEECSSCSTTSEEEEE-ETTTCCEEEEEECCCSSCSSSSCHHHHHHH-HHHHHCCCTTBCCEEEEEEEC-----
T ss_pred             ccceeEEEEEecCCCcEEEEEE-ECCCCCEEEEEEEecccccccchHHHHHHH-HHHHhccCCCcccHhheeeccccccc
Confidence            3689999999999999999999 56788999999886543221   1222222 22233457788877776654      


Q ss_pred             --cCeeEEEEEecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeecc
Q 018699          118 --SDYSILVCDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDH  195 (351)
Q Consensus       118 --~~~~~lv~e~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~  195 (351)
                        .+..|+||||+. ++|.+.+...   ...+++..++.++.|++.||.|||++||+||||||+||+++           
T Consensus        94 ~~~~~~~lv~e~~~-~~l~~~l~~~---~~~~~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIl~~-----------  158 (351)
T 3mi9_A           94 RCKGSIYLVFDFCE-HDLAGLLSNV---LVKFTLSEIKRVMQMLLNGLYYIHRNKILHRDMKAANVLIT-----------  158 (351)
T ss_dssp             ---CEEEEEEECCS-EEHHHHHHCT---TSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEC-----------
T ss_pred             cCCceEEEEEeccC-CCHHHHHhhc---cCCCCHHHHHHHHHHHHHHHHHHHHCCeeCCCCCHHHEEEc-----------
Confidence              456899999995 5888777654   46799999999999999999999999999999999999999           


Q ss_pred             CCCCCcccCCeEEeecCCccccccCC--CCccccccccCCCcccceeccC-CCCCccchHhHHHHHHHHHHhCccccccc
Q 018699          196 DRSGPWQDQGLCLVDWGRGIDLHLFP--DNMEFEGDCRTSGFRCIEMQEK-KPWKFQVDTYGLCAIVHMMLHNSYMEIEK  272 (351)
Q Consensus       196 ~~~~~~~~~~~~l~Dfg~a~~~~~~~--~~~~~~~~~g~~~y~aPE~~~~-~~~~~~~DiwslG~il~~l~~g~~p~~~~  272 (351)
                            .++.++|+|||++.......  .........||+.|+|||++.+ ..++.++|||||||++|+|++|..||...
T Consensus       159 ------~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~  232 (351)
T 3mi9_A          159 ------RDGVLKLADFGLARAFSLAKNSQPNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGN  232 (351)
T ss_dssp             ------TTSCEEECCCTTCEECCCCSSSSCCCCCSSCSCGGGCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCS
T ss_pred             ------CCCCEEEccchhcccccccccccccccCCcccccCccCchhhcCCCCCCcHhHHHHHHHHHHHHHhCCCCCCCC
Confidence                  77889999999987543221  1223345678999999999876 55789999999999999999999998653


Q ss_pred             cCCCC--------Cc-------------------eeeecCcchhhhh----HHHHHHHHHHHHhcCCCCCChHHHHHHHH
Q 018699          273 KASPD--------GG-------------------LVYLPKLSFKRYW----KVELWKSLFTNLLNMSSGNDKEVLQNLQK  321 (351)
Q Consensus       273 ~~~~~--------~~-------------------~~~~~~~~~~~~~----~~~~~~~li~~~L~~dP~~R~s~~e~l~~  321 (351)
                      .....        +.                   .............    .++.+.+||.+||..||.+|||+.|+|+|
T Consensus       233 ~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h  312 (351)
T 3mi9_A          233 TEQHQLALISQLCGSITPEVWPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALNH  312 (351)
T ss_dssp             SHHHHHHHHHHHHCCCCTTTSTTGGGCGGGTSSCCCSSCCCCHHHHHHHHHCCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred             ChHHHHHHHHHHhCCCChhhccccccchhhcccccccccccCHHHHhhhccCChHHHHHHHHHhcCChhhCCCHHHHhCC
Confidence            32100        00                   0000000111111    12678999999999999999999999999


Q ss_pred             HHH
Q 018699          322 SFQ  324 (351)
Q Consensus       322 ~~~  324 (351)
                      +|.
T Consensus       313 p~f  315 (351)
T 3mi9_A          313 DFF  315 (351)
T ss_dssp             GGG
T ss_pred             CCc
Confidence            864

>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ...

Probab=100.00  E-value=5.8e-43  Score=312.22  Aligned_cols=257  Identities=13%  Similarity=0.122  Sum_probs=193.9

Q ss_pred             EEcCeeEEEEEEeeccCceEEEEEEe---cCCCCceEEEEecCCCCChHHHHHHHHHhhhccccccccccceeeecc--c
Q 018699           44 EIGGKKYQIKGCAGQGGFAKVFKAYV---NGDPEDVVALKIQKPAFPWEFYMYRQLDQRISGRERSSFGFAHRIHLY--S  118 (351)
Q Consensus        44 ~i~~~~Y~i~~~lg~G~~g~V~~a~~---~~~~~~~vaiK~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~  118 (351)
                      .+..++|++.+.||+|+||+||+|++   +..+++.||+|++..........+...........|++++.+..++..  .
T Consensus         6 ~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~   85 (295)
T 3ugc_A            6 QFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGR   85 (295)
T ss_dssp             CCCGGGEEEEEEEEECSSEEEEEEEECTTCSSCCEEEEEEEESCCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECHHHH
T ss_pred             cCCHHHhhhhheeeccCCEEEEEEEEecccCCCCcEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCC
Confidence            45678999999999999999999985   356789999999886654333333333344455568888888776643  4


Q ss_pred             CeeEEEEEecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeeccCCC
Q 018699          119 DYSILVCDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRS  198 (351)
Q Consensus       119 ~~~~lv~e~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~~~  198 (351)
                      ...++||||+++++|.+++...   +..+++..++.++.|++.||.|||++||+|+||||+||+++              
T Consensus        86 ~~~~lv~e~~~~~~L~~~l~~~---~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dikp~Nil~~--------------  148 (295)
T 3ugc_A           86 RNLKLIMEYLPYGSLRDYLQKH---KERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVE--------------  148 (295)
T ss_dssp             TSCEEEEECCTTCBHHHHHHHC---GGGCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEE--------------
T ss_pred             CceEEEEEeCCCCCHHHHHHhc---ccccCHHHHHHHHHHHHHHHHHHhcCCcccCCCCHhhEEEc--------------
Confidence            5689999999999999999874   34589999999999999999999999999999999999999              


Q ss_pred             CCcccCCeEEeecCCccccccCCCC-ccccccccCCCcccceeccCCCCCccchHhHHHHHHHHHHhCccccccccCC--
Q 018699          199 GPWQDQGLCLVDWGRGIDLHLFPDN-MEFEGDCRTSGFRCIEMQEKKPWKFQVDTYGLCAIVHMMLHNSYMEIEKKAS--  275 (351)
Q Consensus       199 ~~~~~~~~~l~Dfg~a~~~~~~~~~-~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~p~~~~~~~--  275 (351)
                         .++.++|+|||++......... .......++..|+|||.+.+..++.++||||||+++|+|++|..|+......  
T Consensus       149 ---~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~~~~  225 (295)
T 3ugc_A          149 ---NENRVKIGDFGLTKVLPQDKEFFKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFM  225 (295)
T ss_dssp             ---ETTEEEECCCCSCC-------------CTTCGGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTTCTTCSHHHHHH
T ss_pred             ---CCCeEEEccCcccccccCCcceeeeccCCCCccceeCcHHhcCCCCChHHHHHHHHHHHHHHHhcccccCCChHHHH
Confidence               6777999999998654322111 1122334677799999999999999999999999999999998886533210  


Q ss_pred             ------CCCce---------eeecCcchhhhhHHHHHHHHHHHHhcCCCCCChHHHHHHHH
Q 018699          276 ------PDGGL---------VYLPKLSFKRYWKVELWKSLFTNLLNMSSGNDKEVLQNLQK  321 (351)
Q Consensus       276 ------~~~~~---------~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~~  321 (351)
                            .....         ......+.+..++ +.+.+||.+||..||++|||+.|++..
T Consensus       226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~l~~li~~~l~~dp~~Rps~~el~~~  285 (295)
T 3ugc_A          226 RMIGNDKQGQMIVFHLIELLKNNGRLPRPDGCP-DEIYMIMTECWNNNVNQRPSFRDLALR  285 (295)
T ss_dssp             HHHCTTCCTHHHHHHHHHHHHTTCCCCCCTTCC-HHHHHHHHHHSCSSGGGSCCHHHHHHH
T ss_pred             hhhcCccccchhHHHHHHHHhccCcCCCCcCcC-HHHHHHHHHHcCCChhhCCCHHHHHHH
Confidence                  00000         0011222333444 789999999999999999999999864

>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7

Probab=100.00  E-value=1e-42  Score=317.38  Aligned_cols=264  Identities=13%  Similarity=0.023  Sum_probs=198.7

Q ss_pred             EEEEcCeeEEEEEEeeccCceEEEEEEe----cCCCCceEEEEecCCCCCh-HHHHHHHHHhhhccc-cccccccceeee
Q 018699           42 TIEIGGKKYQIKGCAGQGGFAKVFKAYV----NGDPEDVVALKIQKPAFPW-EFYMYRQLDQRISGR-ERSSFGFAHRIH  115 (351)
Q Consensus        42 ~~~i~~~~Y~i~~~lg~G~~g~V~~a~~----~~~~~~~vaiK~~~~~~~~-e~~~~~~~~~~~~~~-~~~~~~~~~~~~  115 (351)
                      .+++..++|++.+.||+|+||+||+|.+    +..+++.||+|++...... ....+......+... .|++++.+..++
T Consensus        39 ~~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~  118 (344)
T 1rjb_A           39 KWEFPRENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENIVNLLGAC  118 (344)
T ss_dssp             GGBCCGGGEEEEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEE
T ss_pred             CcccCHHHceeeeeecCCCCceeEEeeeeccccCCcceEEEEEecccccCHHHHHHHHHHHHHHHhhcCCCCeeeEEEEE
Confidence            3566778999999999999999999995    2346778999998754221 111222222222333 688899988888


Q ss_pred             cccCeeEEEEEecCCCCHHHHHHHHHhh-------------------CCChhHHHHHHHHHHHHHHHHHHHHCCceecCC
Q 018699          116 LYSDYSILVCDYLSQGTLQDAINSYVVI-------------------GKSMEEVLCIYYTIEMLCILESLHDVGIIHGDF  176 (351)
Q Consensus       116 ~~~~~~~lv~e~~~~~sL~~~l~~~~~~-------------------~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl  176 (351)
                      ...+..++||||+++++|.+++......                   ...+++..++.++.||+.||.|||++||+|+||
T Consensus       119 ~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Di  198 (344)
T 1rjb_A          119 TLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFKSCVHRDL  198 (344)
T ss_dssp             CSSSSCEEEEECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHHHTTEEETTC
T ss_pred             eeCCccEEEEecCCCCcHHHHHhhccccccccccchhhhcccccccccccCCHHHHHHHHHHHHHHHHHHHhCCcccCCC
Confidence            8888999999999999999999864210                   123788999999999999999999999999999


Q ss_pred             CCCcEEEeecCCcceeeccCCCCCcccCCeEEeecCCccccccCCCCccccccccCCCcccceeccCCCCCccchHhHHH
Q 018699          177 KPDNLLIRYARDELTVLDHDRSGPWQDQGLCLVDWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQEKKPWKFQVDTYGLC  256 (351)
Q Consensus       177 ~p~Nill~~~~~~~~~~~~~~~~~~~~~~~~l~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG  256 (351)
                      ||+||+++                 .++.++|+|||++................+|+.|+|||++.+..++.++||||||
T Consensus       199 kp~NIll~-----------------~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG  261 (344)
T 1rjb_A          199 AARNVLVT-----------------HGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYG  261 (344)
T ss_dssp             SGGGEEEE-----------------TTTEEEECCCGGGSCGGGCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHH
T ss_pred             ChhhEEEc-----------------CCCcEEeCCCccCcccccCccceeccCccCccCccCHHHhccCCCChhHhHHHHH
Confidence            99999999                 6778999999998754433222233445678899999999888899999999999


Q ss_pred             HHHHHHHh-CccccccccCCCCCce--eeecCcchhhhhHHHHHHHHHHHHhcCCCCCChHHHHHHHHHH
Q 018699          257 AIVHMMLH-NSYMEIEKKASPDGGL--VYLPKLSFKRYWKVELWKSLFTNLLNMSSGNDKEVLQNLQKSF  323 (351)
Q Consensus       257 ~il~~l~~-g~~p~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~~~~  323 (351)
                      |++|+|++ |..||...........  ........+...+ +.+.+||.+||..||.+||++.+++.+.-
T Consensus       262 ~il~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~l~~li~~~l~~dp~~Rps~~~l~~~l~  330 (344)
T 1rjb_A          262 ILLWEIFSLGVNPYPGIPVDANFYKLIQNGFKMDQPFYAT-EEIYIIMQSCWAFDSRKRPSFPNLTSFLG  330 (344)
T ss_dssp             HHHHHHTTTSCCSSTTCCCSHHHHHHHHTTCCCCCCTTCC-HHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred             HHHHHHHcCCCCCcccCCcHHHHHHHHhcCCCCCCCCCCC-HHHHHHHHHHcCCCchhCcCHHHHHHHHH
Confidence            99999998 9999976443210000  0001112223334 78999999999999999999999998753

>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A*

Probab=100.00  E-value=1.4e-42  Score=322.12  Aligned_cols=268  Identities=15%  Similarity=0.173  Sum_probs=191.5

Q ss_pred             CeeEEEEEEeeccCceEEEEEEecCCCCceEEEEecCCCCC------hHHHHHHHHHhhh-ccccccccccceeeec---
Q 018699           47 GKKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFP------WEFYMYRQLDQRI-SGRERSSFGFAHRIHL---  116 (351)
Q Consensus        47 ~~~Y~i~~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~~------~e~~~~~~~~~~~-~~~~~~~~~~~~~~~~---  116 (351)
                      .++|++.+.||+|+||+||+|+ +..+++.||||++.....      .|...++.+.+.. ....+++++.+...+.   
T Consensus        36 ~~~y~~~~~lg~G~~g~V~~~~-~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~~~iv~~~~~~~~~~  114 (397)
T 1wak_A           36 NGRYHVIRKLGWGHFSTVWLSW-DIQGKKFVAMKVVKSAEHYTETALDEIRLLKSVRNSDPNDPNREMVVQLLDDFKISG  114 (397)
T ss_dssp             TTTEEEEEEEEECSSEEEEEEE-ETTTTEEEEEEEECSCHHHHHHHHHHHHHHHHHHHSCTTCGGGGGBCCEEEEEEEEE
T ss_pred             CCeEEEEEEeeecCCeeEEEEE-ecCCCeEEEEEEEecCCcchHHHHHHHHHHHHHhhcCCCCCCcceeeeeecceeecC
Confidence            5799999999999999999999 577899999999875422      1233333333211 1112455666666554   


Q ss_pred             -ccCeeEEEEEecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHC-CceecCCCCCcEEEeecCCcc----
Q 018699          117 -YSDYSILVCDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDV-GIIHGDFKPDNLLIRYARDEL----  190 (351)
Q Consensus       117 -~~~~~~lv~e~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~-~i~H~dl~p~Nill~~~~~~~----  190 (351)
                       .+...|+||||+ +++|.+.+....  ...+++..++.++.||+.||.|||++ ||+||||||+||+++.++.-.    
T Consensus       115 ~~~~~~~lv~e~~-~~~l~~~~~~~~--~~~~~~~~~~~i~~qi~~aL~~lH~~~givHrDikp~NIll~~~~~~~~~~~  191 (397)
T 1wak_A          115 VNGTHICMVFEVL-GHHLLKWIIKSN--YQGLPLPCVKKIIQQVLQGLDYLHTKCRIIHTDIKPENILLSVNEQYIRRLA  191 (397)
T ss_dssp             TTEEEEEEEECCC-CCBHHHHHHHTT--TSCCCHHHHHHHHHHHHHHHHHHHHTTCEECCCCSGGGEEECCCHHHHHHHH
T ss_pred             CCCceEEEEEecc-CccHHHHHHhcc--cCCCCHHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHeeEeccchhhhhhh
Confidence             456889999999 677777766532  35699999999999999999999999 999999999999998543100    


Q ss_pred             ----------------------------eeeccCCCCCcccCCeEEeecCCccccccCCCCccccccccCCCcccceecc
Q 018699          191 ----------------------------TVLDHDRSGPWQDQGLCLVDWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQE  242 (351)
Q Consensus       191 ----------------------------~~~~~~~~~~~~~~~~~l~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~  242 (351)
                                                  ...............++|+|||.+....     .......||+.|+|||++.
T Consensus       192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DfG~a~~~~-----~~~~~~~gt~~y~aPE~~~  266 (397)
T 1wak_A          192 AEATEWQRSGAPPPSGSAVSTAPATAGNFLVNPLEPKNAEKLKVKIADLGNACWVH-----KHFTEDIQTRQYRSLEVLI  266 (397)
T ss_dssp             HHHC---------------------CCTTSCCTTSGGGGGGCCEEECCGGGCEETT-----BCSCSCCSCGGGCCHHHHH
T ss_pred             hhhHHHhhcCCCCCCCCccccCCcccccccccccccccccccceEecccccccccc-----ccCccCCCCCcccCChhhc
Confidence                                        0000000001123479999999986543     2234457899999999999


Q ss_pred             CCCCCccchHhHHHHHHHHHHhCccccccccCCCCCce-----------------------------------e---e--
Q 018699          243 KKPWKFQVDTYGLCAIVHMMLHNSYMEIEKKASPDGGL-----------------------------------V---Y--  282 (351)
Q Consensus       243 ~~~~~~~~DiwslG~il~~l~~g~~p~~~~~~~~~~~~-----------------------------------~---~--  282 (351)
                      +..++.++|||||||++|+|++|..||...........                                   .   .  
T Consensus       267 ~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~  346 (397)
T 1wak_A          267 GSGYNTPADIWSTACMAFELATGDYLFEPHSGEEYTRDEDHIALIIELLGKVPRKLIVAGKYSKEFFTKKGDLKHITKLK  346 (397)
T ss_dssp             TSCCCTHHHHHHHHHHHHHHHHSSCSCCCCCCSSSCHHHHHHHHHHHHHCSCCHHHHHHCTTGGGTBCTTSSBSSCCCCC
T ss_pred             CCCCCcHHHHHHHHHHHHHHhhCCCCCCCCcccccCchHHHHHHHHHhcCCCChHHhhcccccccccCCccccccccccC
Confidence            99999999999999999999999999975432211000                                   0   0  


Q ss_pred             --------ecCcchhhhhHHHHHHHHHHHHhcCCCCCChHHHHHHHHHHH
Q 018699          283 --------LPKLSFKRYWKVELWKSLFTNLLNMSSGNDKEVLQNLQKSFQ  324 (351)
Q Consensus       283 --------~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~~~~~  324 (351)
                              ......+...+ +.+.+||.+||++||++|||+.|+|+|||.
T Consensus       347 ~~~~~~~~~~~~~~~~~~~-~~~~~li~~~L~~dP~~Rpt~~e~l~hp~~  395 (397)
T 1wak_A          347 PWGLFEVLVEKYEWSQEEA-AGFTDFLLPMLELIPEKRATAAECLRHPWL  395 (397)
T ss_dssp             CCCHHHHHHHTSCCCHHHH-HHHHHHHGGGGCSSGGGSCCHHHHHTSGGG
T ss_pred             CcchhHhhhhhcccchhhH-HHHHHHHHHHhccChhhcCCHHHHhhCccc
Confidence                    00001122223 678999999999999999999999999873

>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7

Probab=100.00  E-value=2.1e-42  Score=316.72  Aligned_cols=251  Identities=19%  Similarity=0.222  Sum_probs=196.4

Q ss_pred             cCeeEEEEEEeeccCceEEEEEEec--CCCCceEEEEecCCC-----------CChHHHHHHHHHhhhccccccccccce
Q 018699           46 GGKKYQIKGCAGQGGFAKVFKAYVN--GDPEDVVALKIQKPA-----------FPWEFYMYRQLDQRISGRERSSFGFAH  112 (351)
Q Consensus        46 ~~~~Y~i~~~lg~G~~g~V~~a~~~--~~~~~~vaiK~~~~~-----------~~~e~~~~~~~~~~~~~~~~~~~~~~~  112 (351)
                      ..++|++.+.||+|+||+||+|++.  ..+++.||||++.+.           ...|...+..+.      .+++++.+.
T Consensus        52 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~------~h~~iv~~~  125 (355)
T 1vzo_A           52 GIENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIR------QSPFLVTLH  125 (355)
T ss_dssp             CGGGEEEEEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHH------TCTTBCCEE
T ss_pred             cccceEEEEEeccCCCEEEEEEEEcccCCCCeEEEEEEEeHHHhhhhhhHHHHHHHHHHHHHHcc------CCCceeEEE
Confidence            3479999999999999999999952  257899999997632           223444444332      356777777


Q ss_pred             eeecccCeeEEEEEecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCccee
Q 018699          113 RIHLYSDYSILVCDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTV  192 (351)
Q Consensus       113 ~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~  192 (351)
                      ..+...+..++||||+++++|.+++...    ..+++..++.++.||+.||.|||++||+||||||+||+++        
T Consensus       126 ~~~~~~~~~~lv~e~~~~~~L~~~l~~~----~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~Dlkp~NIll~--------  193 (355)
T 1vzo_A          126 YAFQTETKLHLILDYINGGELFTHLSQR----ERFTEHEVQIYVGEIVLALEHLHKLGIIYRDIKLENILLD--------  193 (355)
T ss_dssp             EEEEETTEEEEEECCCCSCBHHHHHHHH----SCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEC--------
T ss_pred             EEEeeCceEEEEeecCCCCCHHHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEC--------
Confidence            8788888999999999999999999873    6799999999999999999999999999999999999999        


Q ss_pred             eccCCCCCcccCCeEEeecCCccccccCCCCccccccccCCCcccceeccC--CCCCccchHhHHHHHHHHHHhCccccc
Q 018699          193 LDHDRSGPWQDQGLCLVDWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQEK--KPWKFQVDTYGLCAIVHMMLHNSYMEI  270 (351)
Q Consensus       193 ~~~~~~~~~~~~~~~l~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~--~~~~~~~DiwslG~il~~l~~g~~p~~  270 (351)
                               .++.++|+|||++...... .........||+.|+|||++.+  ..++.++|||||||++|+|++|..||.
T Consensus       194 ---------~~~~~kl~DfG~a~~~~~~-~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DvwslG~il~ell~g~~pf~  263 (355)
T 1vzo_A          194 ---------SNGHVVLTDFGLSKEFVAD-ETERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFT  263 (355)
T ss_dssp             ---------TTSCEEESCSSEEEECCGG-GGGGGCGGGSCCTTCCHHHHTTCC---CTHHHHHHHHHHHHHHHHSSCTTS
T ss_pred             ---------CCCcEEEeeCCCCeecccC-CCCcccCcccCcCccChhhhcCCCCCCCchhhHHHHHHHHHHHHHCCCCCc
Confidence                     7788999999998653211 1122334579999999999975  346899999999999999999999997


Q ss_pred             cccCCCCCc----eeeecCcchhhhhHHHHHHHHHHHHhcCCCCCCh-----HHHHHHHHHHHH
Q 018699          271 EKKASPDGG----LVYLPKLSFKRYWKVELWKSLFTNLLNMSSGNDK-----EVLQNLQKSFQD  325 (351)
Q Consensus       271 ~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~-----s~~e~l~~~~~~  325 (351)
                      .........    .........+..++ ..+.+||.+||..||++||     ++.++++|+|..
T Consensus       264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~li~~~L~~dP~~R~~~~~~s~~ell~h~~f~  326 (355)
T 1vzo_A          264 VDGEKNSQAEISRRILKSEPPYPQEMS-ALAKDLIQRLLMKDPKKRLGCGPRDADEIKEHLFFQ  326 (355)
T ss_dssp             CTTSCCCHHHHHHHHHHCCCCCCTTSC-HHHHHHHHHHTCSSGGGSTTSSTTTHHHHHTSGGGT
T ss_pred             cCCccchHHHHHHHHhccCCCCCcccC-HHHHHHHHHHhhhCHHHhcCCCCCCHHHHHcCcchh
Confidence            544321100    01112233444445 7899999999999999999     999999998643

>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A

Probab=100.00  E-value=8.1e-42  Score=304.05  Aligned_cols=255  Identities=18%  Similarity=0.172  Sum_probs=196.8

Q ss_pred             EEEEcCeeEEEEEEeeccCceEEEEEEecCCCCceEEEEecCCCCCh--HHHHHHHHHhhhccccccccccceeeecc--
Q 018699           42 TIEIGGKKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFPW--EFYMYRQLDQRISGRERSSFGFAHRIHLY--  117 (351)
Q Consensus        42 ~~~i~~~~Y~i~~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~~~--e~~~~~~~~~~~~~~~~~~~~~~~~~~~~--  117 (351)
                      .....++.|++.+.||+|+||+||+|. +..++..||+|++......  +...+......+....|++++.+..++..  
T Consensus        20 ~~~~~~~~~~~~~~lg~G~~g~Vy~~~-~~~~~~~va~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~   98 (290)
T 1t4h_A           20 GMSNDGRFLKFDIEIGRGSFKTVYKGL-DTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTV   98 (290)
T ss_dssp             EECTTSCEEEEEEEEEECSSEEEEEEE-ETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEES
T ss_pred             hcccCceeEEeeeeccCCCCeEEEEeE-ecCCceEEEEEEecchhhCHHHHHHHHHHHHHHHhCCCCCeeeeeeeecccc
Confidence            444567889999999999999999999 5678899999998654322  22223333334455568888877766543  


Q ss_pred             --cCeeEEEEEecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCC--ceecCCCCCcEEEeecCCcceee
Q 018699          118 --SDYSILVCDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVG--IIHGDFKPDNLLIRYARDELTVL  193 (351)
Q Consensus       118 --~~~~~lv~e~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~--i~H~dl~p~Nill~~~~~~~~~~  193 (351)
                        ....++||||+++++|.+++...    ..+++..++.++.|++.||.|||++|  |+|+||+|+||+++.        
T Consensus        99 ~~~~~~~lv~e~~~~~~L~~~l~~~----~~~~~~~~~~~~~qi~~~l~~lH~~~~~i~H~dikp~Nil~~~--------  166 (290)
T 1t4h_A           99 KGKKCIVLVTELMTSGTLKTYLKRF----KVMKIKVLRSWCRQILKGLQFLHTRTPPIIHRDLKCDNIFITG--------  166 (290)
T ss_dssp             SSCEEEEEEEECCCSCBHHHHHHHH----SSCCHHHHHHHHHHHHHHHHHHHTSSSCCCCSCCCGGGEEESS--------
T ss_pred             CCCceEEEEEEecCCCCHHHHHHHc----cCCCHHHHHHHHHHHHHHHHHHHcCCCCEEECCCCHHHEEEEC--------
Confidence              46689999999999999999873    67899999999999999999999999  999999999999973        


Q ss_pred             ccCCCCCcccCCeEEeecCCccccccCCCCccccccccCCCcccceeccCCCCCccchHhHHHHHHHHHHhCcccccccc
Q 018699          194 DHDRSGPWQDQGLCLVDWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQEKKPWKFQVDTYGLCAIVHMMLHNSYMEIEKK  273 (351)
Q Consensus       194 ~~~~~~~~~~~~~~l~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~p~~~~~  273 (351)
                              .++.++|+|||++....    ........|++.|+|||++.+ .++.++|||||||++|+|++|..||....
T Consensus       167 --------~~~~~kl~Dfg~~~~~~----~~~~~~~~~t~~y~aPE~~~~-~~~~~~Di~slG~~l~~l~~g~~pf~~~~  233 (290)
T 1t4h_A          167 --------PTGSVKIGDLGLATLKR----ASFAKAVIGTPEFMAPEMYEE-KYDESVDVYAFGMCMLEMATSEYPYSECQ  233 (290)
T ss_dssp             --------TTSCEEECCTTGGGGCC----TTSBEESCSSCCCCCGGGGGT-CCCTHHHHHHHHHHHHHHHHSSCTTTTCS
T ss_pred             --------CCCCEEEeeCCCccccc----ccccccccCCcCcCCHHHHhc-cCCCcchHHHHHHHHHHHHhCCCCCCCcC
Confidence                    35679999999985422    223345578999999998875 48999999999999999999999996533


Q ss_pred             CCCCCce---eeecCcchhhhhHHHHHHHHHHHHhcCCCCCChHHHHHHHHHH
Q 018699          274 ASPDGGL---VYLPKLSFKRYWKVELWKSLFTNLLNMSSGNDKEVLQNLQKSF  323 (351)
Q Consensus       274 ~~~~~~~---~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~~~~  323 (351)
                      .......   ........+...+ +.+.+||.+||..||.+||++.++++|||
T Consensus       234 ~~~~~~~~~~~~~~~~~~~~~~~-~~l~~li~~~l~~dp~~Rps~~ell~h~~  285 (290)
T 1t4h_A          234 NAAQIYRRVTSGVKPASFDKVAI-PEVKEIIEGCIRQNKDERYSIKDLLNHAF  285 (290)
T ss_dssp             SHHHHHHHHTTTCCCGGGGGCCC-HHHHHHHHHHSCSSGGGSCCHHHHHTSGG
T ss_pred             cHHHHHHHHhccCCccccCCCCC-HHHHHHHHHHccCChhhCCCHHHHhhCcc
Confidence            2100000   0011122233333 78999999999999999999999999986

>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}

Probab=100.00  E-value=4.3e-43  Score=322.65  Aligned_cols=264  Identities=13%  Similarity=0.066  Sum_probs=199.7

Q ss_pred             EEcCeeEEEEEEeeccCceEEEEEEec----CCCCceEEEEecCCCCChHH--HHHHHHHhhhccccccccccceeeecc
Q 018699           44 EIGGKKYQIKGCAGQGGFAKVFKAYVN----GDPEDVVALKIQKPAFPWEF--YMYRQLDQRISGRERSSFGFAHRIHLY  117 (351)
Q Consensus        44 ~i~~~~Y~i~~~lg~G~~g~V~~a~~~----~~~~~~vaiK~~~~~~~~e~--~~~~~~~~~~~~~~~~~~~~~~~~~~~  117 (351)
                      .+..++|++.+.||+|+||+||+|.+.    ..+++.||||++........  ...++ ........|++++.+..++..
T Consensus        67 ~~~~~~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E-~~~l~~l~hpnIv~~~~~~~~  145 (367)
T 3l9p_A           67 EVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLME-ALIISKFNHQNIVRCIGVSLQ  145 (367)
T ss_dssp             BCCGGGEEEEEECCCCSSSCEEEEEECC-----CCEEEEEEECCSSCCHHHHHHHHHH-HHHHHHCCCTTBCCEEEEECS
T ss_pred             hcCHhHeEEeeEeeeCCCEEEEEEEEccCCCCCcceeEEEEecccccChhhHHHHHHH-HHHHHhCCCCCCCeEEEEEec
Confidence            355689999999999999999999952    34678999999875433221  22222 223344578899999998888


Q ss_pred             cCeeEEEEEecCCCCHHHHHHHHHh---hCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeec
Q 018699          118 SDYSILVCDYLSQGTLQDAINSYVV---IGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLD  194 (351)
Q Consensus       118 ~~~~~lv~e~~~~~sL~~~l~~~~~---~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~  194 (351)
                      .+..++||||+++++|.+++.....   ....+++..++.++.||+.||.|||++||+||||||+||+++.++       
T Consensus       146 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~-------  218 (367)
T 3l9p_A          146 SLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPG-------  218 (367)
T ss_dssp             SSSCEEEEECCTTEEHHHHHHHHSCCSSSCCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESCSS-------
T ss_pred             CCCCEEEEEeCCCCCHHHHHHhhccccCccccccHHHHHHHHHHHHHHHHHHHhCCeeCCCCChhhEEEecCC-------
Confidence            8889999999999999999987531   113589999999999999999999999999999999999998432       


Q ss_pred             cCCCCCcccCCeEEeecCCccccccCCCCccccccccCCCcccceeccCCCCCccchHhHHHHHHHHHHh-Ccccccccc
Q 018699          195 HDRSGPWQDQGLCLVDWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQEKKPWKFQVDTYGLCAIVHMMLH-NSYMEIEKK  273 (351)
Q Consensus       195 ~~~~~~~~~~~~~l~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~-g~~p~~~~~  273 (351)
                             .+..++|+|||++................+|+.|+|||++.+..++.++|||||||++|+|++ |..||....
T Consensus       219 -------~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~pf~~~~  291 (367)
T 3l9p_A          219 -------PGRVAKIGDFGMARDIYRAGYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKS  291 (367)
T ss_dssp             -------TTCCEEECCCHHHHHHHHHSSCTTCCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCC
T ss_pred             -------CCceEEECCCccccccccccccccCCCcCCcccEECHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCC
Confidence                   234599999999864432222223344567899999999988899999999999999999998 999987543


Q ss_pred             CCCCCcee-eecCcchhhhhHHHHHHHHHHHHhcCCCCCChHHHHHHHHHH
Q 018699          274 ASPDGGLV-YLPKLSFKRYWKVELWKSLFTNLLNMSSGNDKEVLQNLQKSF  323 (351)
Q Consensus       274 ~~~~~~~~-~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~~~~  323 (351)
                      ........ .......+..++ +.+.+||.+||+.||.+||++.+++++..
T Consensus       292 ~~~~~~~i~~~~~~~~~~~~~-~~l~~li~~~l~~dP~~Rps~~eil~~l~  341 (367)
T 3l9p_A          292 NQEVLEFVTSGGRMDPPKNCP-GPVYRIMTQCWQHQPEDRPNFAIILERIE  341 (367)
T ss_dssp             HHHHHHHHHTTCCCCCCTTCC-HHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred             HHHHHHHHHcCCCCCCCccCC-HHHHHHHHHHcCCCHhHCcCHHHHHHHHH
Confidence            22100000 001112223334 78999999999999999999999999863

>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ...

Probab=100.00  E-value=2.4e-42  Score=317.39  Aligned_cols=254  Identities=19%  Similarity=0.199  Sum_probs=192.8

Q ss_pred             CeeEEEEEEeeccCceEEEEEEecCCCCceEEEEecCCCCChHH-HHHHHHHhhhccccccccccceeeeccc-----Ce
Q 018699           47 GKKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFPWEF-YMYRQLDQRISGRERSSFGFAHRIHLYS-----DY  120 (351)
Q Consensus        47 ~~~Y~i~~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~~~e~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~  120 (351)
                      +++|++.+.||+|+||+||+|+ +..+++.||||++........ ..+......+....|++++.+..+....     ..
T Consensus        26 ~~~y~~~~~lG~G~~g~V~~~~-~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~  104 (364)
T 3qyz_A           26 GPRYTNLSYIGEGAYGMVCSAY-DNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKD  104 (364)
T ss_dssp             TTTEEEEEEEEECSSEEEEEEE-ETTTTEEEEEEEECCTTCHHHHHHHHHHHHHHHHCCCTTBCCCCEEECCSSTTTCCC
T ss_pred             cccEEEEEEeecCCCeEEEEEE-ECCCCeEEEEEEeccccCcHHHHHHHHHHHHHHhcCCCCCccceeEEecCCccccce
Confidence            5789999999999999999999 577889999999875433221 2222222333445678888877766443     46


Q ss_pred             eEEEEEecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeeccCCCCC
Q 018699          121 SILVCDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSGP  200 (351)
Q Consensus       121 ~~lv~e~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~~~~~  200 (351)
                      .|+||||+. ++|.+++..     ..+++..++.++.|++.||.|||++||+||||||+||+++                
T Consensus       105 ~~iv~e~~~-~~L~~~l~~-----~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIl~~----------------  162 (364)
T 3qyz_A          105 VYIVQDLME-TDLYKLLKT-----QHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLN----------------  162 (364)
T ss_dssp             EEEEEECCS-EEHHHHHHH-----CCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEC----------------
T ss_pred             EEEEEcccC-cCHHHHHHh-----CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCChHhEEEC----------------
Confidence            899999995 699998875     4699999999999999999999999999999999999999                


Q ss_pred             cccCCeEEeecCCccccccCCCC-ccccccccCCCcccceecc-CCCCCccchHhHHHHHHHHHHhCccccccccCCCCC
Q 018699          201 WQDQGLCLVDWGRGIDLHLFPDN-MEFEGDCRTSGFRCIEMQE-KKPWKFQVDTYGLCAIVHMMLHNSYMEIEKKASPDG  278 (351)
Q Consensus       201 ~~~~~~~l~Dfg~a~~~~~~~~~-~~~~~~~g~~~y~aPE~~~-~~~~~~~~DiwslG~il~~l~~g~~p~~~~~~~~~~  278 (351)
                       .++.++|+|||++......... .......||+.|+|||++. +..++.++|||||||++|+|++|..||.........
T Consensus       163 -~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~  241 (364)
T 3qyz_A          163 -TTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQL  241 (364)
T ss_dssp             -TTCCEEECCCTTCEECCGGGCBCCTTCCCCSCGGGCCHHHHHTBCSCSTHHHHHHHHHHHHHHHHSSCSSCCSSGGGHH
T ss_pred             -CCCCEEEEeCcceEecCCCCCccccccccccccCCCCCHHhcCCCCCCcchhHHHHHHHHHHHHHCCCCCCCCChHHHH
Confidence             7788999999998754322111 1234457899999999865 456899999999999999999999999654322100


Q ss_pred             cee----------------------------eecCcchh---hhhHHHHHHHHHHHHhcCCCCCChHHHHHHHHHHHH
Q 018699          279 GLV----------------------------YLPKLSFK---RYWKVELWKSLFTNLLNMSSGNDKEVLQNLQKSFQD  325 (351)
Q Consensus       279 ~~~----------------------------~~~~~~~~---~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~~~~~~  325 (351)
                      ...                            .....+..   ...+ +.+.+||.+||++||++|||+.|+|+|||..
T Consensus       242 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~  318 (364)
T 3qyz_A          242 NHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNAD-SKALDLLDKMLTFNPHKRIEVEQALAHPYLE  318 (364)
T ss_dssp             HHHHHHHCSCCHHHHHTCCCHHHHHHHHTSCCCCCCCHHHHCTTSC-HHHHHHHHHHTCSSTTTSCCHHHHHTSGGGT
T ss_pred             HHHHHHhCCCCHHHHHHhhhhhHHHHHHhcCCccCCCHHHhCCCCC-HHHHHHHHHHcCCChhhCCCHHHHhcCcchh
Confidence            000                            00001111   1123 7789999999999999999999999998744

>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A*

Probab=100.00  E-value=2.7e-43  Score=313.35  Aligned_cols=257  Identities=15%  Similarity=0.146  Sum_probs=192.5

Q ss_pred             EcCeeEEEEEEeeccCceEEEEEEecCCCC-------ceEEEEecCCCCChHHHHHHHHHhhhccccccccccceeeecc
Q 018699           45 IGGKKYQIKGCAGQGGFAKVFKAYVNGDPE-------DVVALKIQKPAFPWEFYMYRQLDQRISGRERSSFGFAHRIHLY  117 (351)
Q Consensus        45 i~~~~Y~i~~~lg~G~~g~V~~a~~~~~~~-------~~vaiK~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~  117 (351)
                      +..++|++.+.||+|+||+||+|.+ ..++       ..||+|++........+.+...........|++++.+..++..
T Consensus         5 i~~~~y~~~~~lg~G~~g~V~~~~~-~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~   83 (289)
T 4fvq_A            5 IRNEDLIFNESLGQGTFTKIFKGVR-REVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSHKHLVLNYGVCVC   83 (289)
T ss_dssp             CCGGGEEEEEEEEEETTEEEEEEEE-EEECGGGCEEEEEEEEEEECGGGGGGHHHHHHHHHHHHTSCCTTBCCEEEEECC
T ss_pred             echhHeeeeeeeccCCCceEEEEEE-ecccccccccchhhhhhhcccccHHHHHHHHHHHHHHHhCCCCCEeEEEEEEEe
Confidence            4568999999999999999999995 3434       5799999876543333333333344455678899999988888


Q ss_pred             cCeeEEEEEecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeeccCC
Q 018699          118 SDYSILVCDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDR  197 (351)
Q Consensus       118 ~~~~~lv~e~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~~  197 (351)
                      ++..++||||+++++|.+++...   +..+++..++.++.||+.||.|||++||+||||||+||+++.+.....      
T Consensus        84 ~~~~~lv~e~~~~~~L~~~l~~~---~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~~~------  154 (289)
T 4fvq_A           84 GDENILVQEFVKFGSLDTYLKKN---KNCINILWKLEVAKQLAAAMHFLEENTLIHGNVCAKNILLIREEDRKT------  154 (289)
T ss_dssp             TTCCEEEEECCTTCBHHHHHHHT---GGGCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEEECCBGGG------
T ss_pred             CCCCEEEEECCCCCCHHHHHHhC---CCCCCHHHHHHHHHHHHHHHHHHhhCCeECCCcCcceEEEecCCcccc------
Confidence            88999999999999999999874   345899999999999999999999999999999999999995432100      


Q ss_pred             CCCcccCCeEEeecCCccccccCCCCccccccccCCCcccceeccC-CCCCccchHhHHHHHHHHHHhCccccccccCCC
Q 018699          198 SGPWQDQGLCLVDWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQEK-KPWKFQVDTYGLCAIVHMMLHNSYMEIEKKASP  276 (351)
Q Consensus       198 ~~~~~~~~~~l~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~~DiwslG~il~~l~~g~~p~~~~~~~~  276 (351)
                         ...+.++|+|||++....      ......+++.|+|||++.+ ..++.++|||||||++|+|++|..|+.......
T Consensus       155 ---~~~~~~kl~Dfg~~~~~~------~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~~~~~~~~~  225 (289)
T 4fvq_A          155 ---GNPPFIKLSDPGISITVL------PKDILQERIPWVPPECIENPKNLNLATDKWSFGTTLWEICSGGDKPLSALDSQ  225 (289)
T ss_dssp             ---TBCCEEEECCCCSCTTTS------CHHHHHHTTTTSCHHHHHCGGGCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHH
T ss_pred             ---cccceeeeccCccccccc------CccccCCcCcccCHHHhCCCCCCCchhHHHHHHHHHHHHHcCCCCCccccchH
Confidence               012239999999885421      1233457889999999987 678999999999999999999655544322110


Q ss_pred             CCceeeecCcchhhhhHHHHHHHHHHHHhcCCCCCChHHHHHHHH
Q 018699          277 DGGLVYLPKLSFKRYWKVELWKSLFTNLLNMSSGNDKEVLQNLQK  321 (351)
Q Consensus       277 ~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~~  321 (351)
                      ............+...+ +.+.+||.+||+.||++||++.+++++
T Consensus       226 ~~~~~~~~~~~~~~~~~-~~l~~li~~~l~~dp~~Rps~~~ll~~  269 (289)
T 4fvq_A          226 RKLQFYEDRHQLPAPKA-AELANLINNCMDYEPDHRPSFRAIIRD  269 (289)
T ss_dssp             HHHHHHHTTCCCCCCSS-CTTHHHHHHHSCSSGGGSCCHHHHHHH
T ss_pred             HHHHHhhccCCCCCCCC-HHHHHHHHHHcCCChhHCcCHHHHHHH
Confidence            00001111122222223 678999999999999999999999986

>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens}

Probab=100.00  E-value=1.1e-42  Score=311.76  Aligned_cols=257  Identities=19%  Similarity=0.153  Sum_probs=194.8

Q ss_pred             CeeEEEEEEeeccCceEEEEEEecCCCCceEEEEecCCCC----ChHHHHHHHHHhhhccccccccccceeee--cccCe
Q 018699           47 GKKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAF----PWEFYMYRQLDQRISGRERSSFGFAHRIH--LYSDY  120 (351)
Q Consensus        47 ~~~Y~i~~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~----~~e~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~  120 (351)
                      .++|++.+.||+|+||.||+|. +..+++.||+|++....    ......+...........|++++.+..+.  ...+.
T Consensus         4 ~~~y~i~~~lg~G~~g~V~~~~-~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~   82 (305)
T 2wtk_C            4 IGKYLMGDLLGEGSYGKVKEVL-DSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLRHKNVIQLVDVLYNEEKQK   82 (305)
T ss_dssp             -CCBCCCCEEEECSSCEEEEEE-BTTTCCEEEEEEECHHHHHHSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEECC---C
T ss_pred             ccceeEeeEEecCCCeEEEEEE-ECCCCcEEEEEEeccccccccchhHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCCCe
Confidence            3689999999999999999999 57788999999987432    11122222223334555688888888776  34568


Q ss_pred             eEEEEEecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeeccCCCCC
Q 018699          121 SILVCDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSGP  200 (351)
Q Consensus       121 ~~lv~e~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~~~~~  200 (351)
                      .++||||+.++ |.+++....  +..+++..++.++.||+.||.|||++||+|+||+|+||+++                
T Consensus        83 ~~lv~e~~~~~-l~~~~~~~~--~~~~~~~~~~~~~~qi~~al~~LH~~~i~H~dlkp~NIl~~----------------  143 (305)
T 2wtk_C           83 MYMVMEYCVCG-MQEMLDSVP--EKRFPVCQAHGYFCQLIDGLEYLHSQGIVHKDIKPGNLLLT----------------  143 (305)
T ss_dssp             EEEEEECCSEE-HHHHHHHST--TCSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEC----------------
T ss_pred             EEEEehhccCC-HHHHHHhCc--ccccCHHHHHHHHHHHHHHHHHHHHCCeeecCCCcccEEEc----------------
Confidence            89999999665 877776643  45789999999999999999999999999999999999999                


Q ss_pred             cccCCeEEeecCCccccccCCCCccccccccCCCcccceeccCCCC--CccchHhHHHHHHHHHHhCccccccccCCCCC
Q 018699          201 WQDQGLCLVDWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQEKKPW--KFQVDTYGLCAIVHMMLHNSYMEIEKKASPDG  278 (351)
Q Consensus       201 ~~~~~~~l~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~--~~~~DiwslG~il~~l~~g~~p~~~~~~~~~~  278 (351)
                       .++.++|+|||++................|++.|+|||++.+...  +.++||||||+++|+|++|..||.........
T Consensus       144 -~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~  222 (305)
T 2wtk_C          144 -TGGTLKISALGVAEALHPFAADDTCRTSQGSPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTGLYPFEGDNIYKLF  222 (305)
T ss_dssp             -TTCCEEECCCTTCEECCTTCSSCEECCCCSCGGGCCHHHHTCCSCEESHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHH
T ss_pred             -CCCcEEeeccccccccCccccccccccCCCCCCCcChhhccCcccCCcchhhHHHHHHHHHHHHhCCCCCCCchHHHHH
Confidence             778899999999876543333344455678999999999976543  67999999999999999999999754321000


Q ss_pred             ceeeecCcchhhhhHHHHHHHHHHHHhcCCCCCChHHHHHHHHHHHH
Q 018699          279 GLVYLPKLSFKRYWKVELWKSLFTNLLNMSSGNDKEVLQNLQKSFQD  325 (351)
Q Consensus       279 ~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~~~~~~  325 (351)
                      ..........+...+ +.+.+||.+||..||.+||++.|+++|+|..
T Consensus       223 ~~i~~~~~~~~~~~~-~~l~~li~~~l~~dp~~Rps~~~ll~~~~~~  268 (305)
T 2wtk_C          223 ENIGKGSYAIPGDCG-PPLSDLLKGMLEYEPAKRFSIRQIRQHSWFR  268 (305)
T ss_dssp             HHHHHCCCCCCSSSC-HHHHHHHHHHTCSSTTTSCCHHHHHHSHHHH
T ss_pred             HHHhcCCCCCCCccC-HHHHHHHHHHccCChhhCCCHHHHhcCcccc
Confidence            000111122233334 7889999999999999999999999998754

>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A*

Probab=100.00  E-value=1.6e-43  Score=320.56  Aligned_cols=258  Identities=16%  Similarity=0.121  Sum_probs=196.5

Q ss_pred             CeeEEEE-EEeeccCceEEEEEEecCCCCceEEEEecCCCCCh---HHHHHHHHHhhhccccccccccceeeecccCeeE
Q 018699           47 GKKYQIK-GCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFPW---EFYMYRQLDQRISGRERSSFGFAHRIHLYSDYSI  122 (351)
Q Consensus        47 ~~~Y~i~-~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~~~---e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  122 (351)
                      .++|.+. +.||+|+||+||+|. +..+++.||+|++......   .....+++........+++++.+..++...+..+
T Consensus        27 ~~~y~~~~~~lG~G~~g~V~~~~-~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~iv~~~~~~~~~~~~~  105 (327)
T 3lm5_A           27 NNFYILTSKELGRGKFAVVRQCI-SKSTGQEYAAKFLKKRRRGQDCRAEILHEIAVLELAKSCPRVINLHEVYENTSEII  105 (327)
T ss_dssp             HHHEEEEEEEEEEETTEEEEEEE-ETTTCCEEEEEEEESEETTEECHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEE
T ss_pred             hhEEeeccceeCCCCCeEEEEEE-ECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHHhccCCCCEEEEEEEEEeCCeEE
Confidence            4788888 899999999999999 5778899999998753221   2233333333333345688888888888889999


Q ss_pred             EEEEecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeeccCCCCCcc
Q 018699          123 LVCDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSGPWQ  202 (351)
Q Consensus       123 lv~e~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~~~~~~~  202 (351)
                      +||||+++++|.+++....  ...+++..++.++.|++.||.|||++||+||||||+||+++...              .
T Consensus       106 lv~e~~~~~~L~~~~~~~~--~~~~~~~~~~~i~~ql~~~L~~LH~~givH~Dikp~NIl~~~~~--------------~  169 (327)
T 3lm5_A          106 LILEYAAGGEIFSLCLPEL--AEMVSENDVIRLIKQILEGVYYLHQNNIVHLDLKPQNILLSSIY--------------P  169 (327)
T ss_dssp             EEEECCTTEEGGGGGSSCC---CCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEESCBT--------------T
T ss_pred             EEEEecCCCcHHHHHHHhc--ccCCCHHHHHHHHHHHHHHHHHHHHCCeecCcCChHHEEEecCC--------------C
Confidence            9999999999999875421  36789999999999999999999999999999999999998321              2


Q ss_pred             cCCeEEeecCCccccccCCCCccccccccCCCcccceeccCCCCCccchHhHHHHHHHHHHhCccccccccCCCCCce--
Q 018699          203 DQGLCLVDWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQEKKPWKFQVDTYGLCAIVHMMLHNSYMEIEKKASPDGGL--  280 (351)
Q Consensus       203 ~~~~~l~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~p~~~~~~~~~~~~--  280 (351)
                      .+.++|+|||++....   .........||+.|+|||++.+..++.++|||||||++|+|++|..||...........  
T Consensus       170 ~~~~kL~Dfg~a~~~~---~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~  246 (327)
T 3lm5_A          170 LGDIKIVDFGMSRKIG---HACELREIMGTPEYLAPEILNYDPITTATDMWNIGIIAYMLLTHTSPFVGEDNQETYLNIS  246 (327)
T ss_dssp             BCCEEECCGGGCEEC------------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHH
T ss_pred             CCcEEEeeCccccccC---CccccccccCCcCccCCeeecCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCchHHHHHHH
Confidence            6779999999986543   22233456789999999999999999999999999999999999999965432210000  


Q ss_pred             --eeecCcchhhhhHHHHHHHHHHHHhcCCCCCChHHHHHHHHHHHH
Q 018699          281 --VYLPKLSFKRYWKVELWKSLFTNLLNMSSGNDKEVLQNLQKSFQD  325 (351)
Q Consensus       281 --~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~~~~~~  325 (351)
                        ...........++ +.+.+||.+||++||++||++.++|+|+|..
T Consensus       247 ~~~~~~~~~~~~~~~-~~~~~li~~~L~~dP~~Rpt~~~ll~h~~~~  292 (327)
T 3lm5_A          247 QVNVDYSEETFSSVS-QLATDFIQSLLVKNPEKRPTAEICLSHSWLQ  292 (327)
T ss_dssp             HTCCCCCTTTTTTSC-HHHHHHHHHHSCSSGGGSCCHHHHTTCGGGC
T ss_pred             hcccccCchhhcccC-HHHHHHHHHHcCCChhhCcCHHHHhCCHhhc
Confidence              0011111222233 7899999999999999999999999998743

>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A

Probab=100.00  E-value=1.7e-41  Score=302.57  Aligned_cols=253  Identities=15%  Similarity=0.172  Sum_probs=189.8

Q ss_pred             CeeEEEEEEeeccCceEEEEEEecCCCCceEEEEecCCCCCh-HHHHHHHHHhhhccccccccccceeeecccCeeEEEE
Q 018699           47 GKKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFPW-EFYMYRQLDQRISGRERSSFGFAHRIHLYSDYSILVC  125 (351)
Q Consensus        47 ~~~Y~i~~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~~~-e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~  125 (351)
                      +++|++.+.||+|+||+||+|+ +..+++.||+|++...... .......+...  ...++.+.....+...++..++||
T Consensus         8 ~~~y~~~~~lg~G~~g~V~~~~-~~~~~~~vavK~~~~~~~~~~~~~e~~~l~~--l~~~~~i~~~~~~~~~~~~~~lv~   84 (296)
T 3uzp_A            8 GNRYRLGRKIGSGSFGDIYLGT-DIAAGEEVAIKLECVKTKHPQLHIESKIYKM--MQGGVGIPTIRWCGAEGDYNVMVM   84 (296)
T ss_dssp             TTTEEEEEEEEEETTEEEEEEE-ETTTTEEEEEEEEESCSSCCHHHHHHHHHHH--HTTSTTCCCEEEEEEETTEEEEEE
T ss_pred             ccEEEEEEEEccCCCeEEEEEE-EcCCCcEEEEEEecCCcchhHHHHHHHHHHH--hhcCCCCCccccccCCCCceEEEE
Confidence            6899999999999999999999 5678999999987654332 21111111121  122333444444556678889999


Q ss_pred             EecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeeccCCCCCcccCC
Q 018699          126 DYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSGPWQDQG  205 (351)
Q Consensus       126 e~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~~~~~~~~~~  205 (351)
                      ||+ +++|.+++...   +..+++..++.++.|++.|+.|||++||+|+||||+||+++.++              .++.
T Consensus        85 e~~-~~~L~~~~~~~---~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dlkp~NIl~~~~~--------------~~~~  146 (296)
T 3uzp_A           85 ELL-GPSLEDLFNFC---SRKFSLKTVLLLADQMISRIEYIHSKNFIHRDVKPDNFLMGLGK--------------KGNL  146 (296)
T ss_dssp             ECC-CCBHHHHHHHT---TTCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECCGG--------------GTTC
T ss_pred             Eec-CCCHHHHHHhh---ccCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHeEEecCC--------------CCCe
Confidence            999 99999999854   46799999999999999999999999999999999999995222              5677


Q ss_pred             eEEeecCCccccccCCCC-----ccccccccCCCcccceeccCCCCCccchHhHHHHHHHHHHhCccccccccCCCCCce
Q 018699          206 LCLVDWGRGIDLHLFPDN-----MEFEGDCRTSGFRCIEMQEKKPWKFQVDTYGLCAIVHMMLHNSYMEIEKKASPDGGL  280 (351)
Q Consensus       206 ~~l~Dfg~a~~~~~~~~~-----~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~p~~~~~~~~~~~~  280 (351)
                      ++|+|||++.........     .......||+.|+|||++.+..++.++|||||||++|+|++|..||...........
T Consensus       147 ~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~  226 (296)
T 3uzp_A          147 VYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQK  226 (296)
T ss_dssp             EEECCCTTCEECBCTTTCCBCCCCCSCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSSSH
T ss_pred             EEEeeCCCcccccccccccccccccccccccccccCChhhhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCcCchhhhhh
Confidence            999999998754322211     112455789999999999999999999999999999999999999986443211111


Q ss_pred             ee--------ecCcchhhhhHHHHHHHHHHHHhcCCCCCChHHHHHHHH
Q 018699          281 VY--------LPKLSFKRYWKVELWKSLFTNLLNMSSGNDKEVLQNLQK  321 (351)
Q Consensus       281 ~~--------~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~~  321 (351)
                      ..        .+....+..++ +.+.+||.+||+.||++||++.++++.
T Consensus       227 ~~~~~~~~~~~~~~~~~~~~~-~~l~~li~~~l~~dp~~Rps~~~l~~~  274 (296)
T 3uzp_A          227 YERISEKKMSTPIEVLCKGYP-SEFATYLNFCRSLRFDDKPDYSYLRQL  274 (296)
T ss_dssp             HHHHHHHHHHSCHHHHTTTSC-HHHHHHHHHHHTSCTTCCCCHHHHHHH
T ss_pred             hhhhcccccCCchHHHHhhCC-HHHHHHHHHHHhcCcCcCCCHHHHHHH
Confidence            00        01111112234 789999999999999999999888763

>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus}

Probab=100.00  E-value=2.4e-42  Score=312.14  Aligned_cols=259  Identities=12%  Similarity=0.124  Sum_probs=179.5

Q ss_pred             EEEcCeeEEEEEEeeccCceEEEEEEecCCCCc---eEEEEecCCCCC--hHHHHHHHHHhhhccccccccccceeeecc
Q 018699           43 IEIGGKKYQIKGCAGQGGFAKVFKAYVNGDPED---VVALKIQKPAFP--WEFYMYRQLDQRISGRERSSFGFAHRIHLY  117 (351)
Q Consensus        43 ~~i~~~~Y~i~~~lg~G~~g~V~~a~~~~~~~~---~vaiK~~~~~~~--~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~  117 (351)
                      +.+..++|++.+.||+|+||+||+|.+ ..+++   .||+|++.....  .....+...........|++++.+..+...
T Consensus        18 ~~i~~~~y~~~~~lg~G~~g~Vy~~~~-~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~   96 (323)
T 3qup_A           18 VLIPEQQFTLGRMLGKGEFGSVREAQL-KQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEFDHPHVAKLVGVSLR   96 (323)
T ss_dssp             TBCC---CEEEEEEEEETTEEEEEEEC--------CEEEEEEC------CHHHHHHHHHHHHHTTCCCTTBCCCCEEEEC
T ss_pred             cccChhHeEEeceecccCCeEEEEEEE-cccCCcceeEEEEEecccccCHHHHHHHHHHHHHHHHCCCCceehhhceeec
Confidence            345678999999999999999999995 34433   899999876532  222233333334455578888888877765


Q ss_pred             cCee------EEEEEecCCCCHHHHHHHHHh--hCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCc
Q 018699          118 SDYS------ILVCDYLSQGTLQDAINSYVV--IGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDE  189 (351)
Q Consensus       118 ~~~~------~lv~e~~~~~sL~~~l~~~~~--~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~  189 (351)
                      ....      ++||||+.+++|.+++.....  ....+++..++.++.|++.||+|||++||+||||||+||+++     
T Consensus        97 ~~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivH~Dikp~NIli~-----  171 (323)
T 3qup_A           97 SRAKGRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIACGMEYLSSRNFIHRDLAARNCMLA-----  171 (323)
T ss_dssp             C-------CEEEEEECCTTCBHHHHHHHHHC---CCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEC-----
T ss_pred             cccccCCCccEEEEEeccCCcHHHHHHhhhccccccccCHHHHHHHHHHHHHHHHHHHcCCcccCCCCcceEEEc-----
Confidence            5443      899999999999999976431  122689999999999999999999999999999999999999     


Q ss_pred             ceeeccCCCCCcccCCeEEeecCCccccccCCCCccccccccCCCcccceeccCCCCCccchHhHHHHHHHHHHh-Cccc
Q 018699          190 LTVLDHDRSGPWQDQGLCLVDWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQEKKPWKFQVDTYGLCAIVHMMLH-NSYM  268 (351)
Q Consensus       190 ~~~~~~~~~~~~~~~~~~l~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~-g~~p  268 (351)
                                  .++.++|+|||++................+++.|+|||.+.+..++.++|||||||++|+|++ |..|
T Consensus       172 ------------~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p  239 (323)
T 3qup_A          172 ------------EDMTVCVADFGLSRKIYSGDYYRQGCASKLPVKWLALESLADNLYTVHSDVWAFGVTMWEIMTRGQTP  239 (323)
T ss_dssp             ------------TTSCEEECCCCC-----------------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCT
T ss_pred             ------------CCCCEEEeeccccccccccccccccccccCcccccCchhhcCCCCCCccchhhHHHHHHHHHhCCCCC
Confidence                        778899999999865432222222233456778999999999999999999999999999999 8999


Q ss_pred             cccccCCCCCcee-eecCcchhhhhHHHHHHHHHHHHhcCCCCCChHHHHHHH
Q 018699          269 EIEKKASPDGGLV-YLPKLSFKRYWKVELWKSLFTNLLNMSSGNDKEVLQNLQ  320 (351)
Q Consensus       269 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~  320 (351)
                      |............ .......+..++ +.+.+||.+||..||.+||++.++++
T Consensus       240 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~l~~li~~~l~~dp~~Rps~~~l~~  291 (323)
T 3qup_A          240 YAGIENAEIYNYLIGGNRLKQPPECM-EEVYDLMYQCWSADPKQRPSFTCLRM  291 (323)
T ss_dssp             TTTCCGGGHHHHHHTTCCCCCCTTCC-HHHHHHHHHTTCSSGGGSCCHHHHHH
T ss_pred             ccccChHHHHHHHhcCCCCCCCCccC-HHHHHHHHHHccCChhhCcCHHHHHH
Confidence            8754432110000 011122233344 78999999999999999999666654

>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A

Probab=100.00  E-value=5.9e-43  Score=310.24  Aligned_cols=256  Identities=12%  Similarity=0.053  Sum_probs=197.5

Q ss_pred             EEEEcCeeEEEEEEeeccCceEEEEEEecCCCCceEEEEecCCCCChHHHHHHHHHhhhccccccccccceeeecccCee
Q 018699           42 TIEIGGKKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFPWEFYMYRQLDQRISGRERSSFGFAHRIHLYSDYS  121 (351)
Q Consensus        42 ~~~i~~~~Y~i~~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  121 (351)
                      .+.+..++|++.+.||+|+||+||+|.+  .++..||+|++......+....+++ .......|++++.+..++...+..
T Consensus        18 ~~~~~~~~y~~~~~lg~G~~g~V~~~~~--~~~~~vavK~~~~~~~~~~~~~~E~-~~l~~l~h~~i~~~~~~~~~~~~~   94 (283)
T 3gen_A           18 SWEIDPKDLTFLKELGTGQFGVVKYGKW--RGQYDVAIKMIKEGSMSEDEFIEEA-KVMMNLSHEKLVQLYGVCTKQRPI   94 (283)
T ss_dssp             TTBCCGGGEEEEEECC---CEEEEEEEE--TTTEEEEEEEECTTSBCHHHHHHHH-HHHHTCCCTTBCCEEEEECSSSSE
T ss_pred             CccCCHHHHHhHhhcCCCCCceEEEEEE--cCCCeEEEEEecCCCCCHHHHHHHH-HHHhcCCCCCEeeEEEEEecCCCe
Confidence            3456778999999999999999999985  3567899999987655544443333 333445688888888888888899


Q ss_pred             EEEEEecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeeccCCCCCc
Q 018699          122 ILVCDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSGPW  201 (351)
Q Consensus       122 ~lv~e~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~~~~~~  201 (351)
                      ++||||+++++|.+++...   ...+++..++.++.|++.|+.|||++||+|+||||+||+++                 
T Consensus        95 ~lv~e~~~~~~L~~~l~~~---~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dikp~Nili~-----------------  154 (283)
T 3gen_A           95 FIITEYMANGCLLNYLREM---RHRFQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARNCLVN-----------------  154 (283)
T ss_dssp             EEEECCCTTCBHHHHHHCG---GGCCCHHHHHHHHHHHHHHHHHHHHTTCCCSSCSGGGEEEC-----------------
T ss_pred             EEEEeccCCCcHHHHHHHh---ccCCCHHHHHHHHHHHHHHHHHHHHCCccCCCCccceEEEc-----------------
Confidence            9999999999999999764   35799999999999999999999999999999999999999                 


Q ss_pred             ccCCeEEeecCCccccccCCCCccccccccCCCcccceeccCCCCCccchHhHHHHHHHHHHh-CccccccccCCCCCce
Q 018699          202 QDQGLCLVDWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQEKKPWKFQVDTYGLCAIVHMMLH-NSYMEIEKKASPDGGL  280 (351)
Q Consensus       202 ~~~~~~l~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~-g~~p~~~~~~~~~~~~  280 (351)
                      .++.++|+|||++...... .........+++.|+|||++.+..++.++||||||+++|+|++ |..||...........
T Consensus       155 ~~~~~kl~Dfg~~~~~~~~-~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~t~g~~p~~~~~~~~~~~~  233 (283)
T 3gen_A          155 DQGVVKVSDFGLSRYVLDD-EYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEH  233 (283)
T ss_dssp             TTSCEEECSTTGGGGBCCH-HHHSTTSTTSCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHHH
T ss_pred             CCCCEEEcccccccccccc-ccccccCCccCcccCCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCccccChhHHHHH
Confidence            7778999999998643211 0111233346778999999998889999999999999999998 9999875432210000


Q ss_pred             e-eecCcchhhhhHHHHHHHHHHHHhcCCCCCChHHHHHHHHH
Q 018699          281 V-YLPKLSFKRYWKVELWKSLFTNLLNMSSGNDKEVLQNLQKS  322 (351)
Q Consensus       281 ~-~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~~~  322 (351)
                      . .......+...+ +.+.+||.+||+.||.+||++.+++.+.
T Consensus       234 ~~~~~~~~~~~~~~-~~l~~li~~~l~~~p~~Rps~~~ll~~L  275 (283)
T 3gen_A          234 IAQGLRLYRPHLAS-EKVYTIMYSCWHEKADERPTFKILLSNI  275 (283)
T ss_dssp             HHTTCCCCCCTTCC-HHHHHHHHHTTCSSGGGSCCHHHHHHHH
T ss_pred             HhcccCCCCCCcCC-HHHHHHHHHHccCChhHCcCHHHHHHHH
Confidence            0 011112222333 7899999999999999999999999874

>4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A

Probab=100.00  E-value=9.7e-42  Score=304.10  Aligned_cols=252  Identities=15%  Similarity=0.168  Sum_probs=185.8

Q ss_pred             CeeEEEEEEeeccCceEEEEEEecCCCCceEEEEecCCCCCh-HHHHHHHHHhhhccccccccccceeeecccCeeEEEE
Q 018699           47 GKKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFPW-EFYMYRQLDQRISGRERSSFGFAHRIHLYSDYSILVC  125 (351)
Q Consensus        47 ~~~Y~i~~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~~~-e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~  125 (351)
                      +++|++.+.||+|+||+||+|+ +..+++.||+|++...... .......+...  ...++.+.....+...++..++||
T Consensus         8 ~~~y~~~~~lg~G~~g~V~~~~-~~~~~~~vavK~~~~~~~~~~~~~e~~~l~~--l~~~~~i~~~~~~~~~~~~~~lv~   84 (296)
T 4hgt_A            8 GNRYRLGRKIGSGSFGDIYLGT-DIAAGEEVAIKLECVKTKHPQLHIESKIYKM--MQGGVGIPTIRWCGAEGDYNVMVM   84 (296)
T ss_dssp             ---CEEEEEEEECSSSEEEEEE-ETTTTEEEEEEEEEC---CCCHHHHHHHHHH--HTTSTTCCCEEEEEEETTEEEEEE
T ss_pred             CCceEEeeeecCCCCeEEEEEE-EcCCCceEEEEeecccccchHHHHHHHHHHH--hcCCCCCCeeeeecCCCCceEEEE
Confidence            5789999999999999999999 5778899999986543221 11111111111  112334444445556678889999


Q ss_pred             EecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeeccCCCCCcccCC
Q 018699          126 DYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSGPWQDQG  205 (351)
Q Consensus       126 e~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~~~~~~~~~~  205 (351)
                      ||+ +++|.+++...   +..+++..++.++.|++.||.|||++||+|+||||+||+++.++              .++.
T Consensus        85 e~~-~~~L~~~~~~~---~~~~~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIl~~~~~--------------~~~~  146 (296)
T 4hgt_A           85 ELL-GPSLEDLFNFC---SRKFSLKTVLLLADQMISRIEYIHSKNFIHRDVKPDNFLMGLGK--------------KGNL  146 (296)
T ss_dssp             ECC-CCBHHHHHHHT---TSCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECCGG--------------GTTC
T ss_pred             Ecc-CCCHHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeeeeccC--------------CCCe
Confidence            999 99999999864   46799999999999999999999999999999999999994211              6678


Q ss_pred             eEEeecCCccccccCCCC-----ccccccccCCCcccceeccCCCCCccchHhHHHHHHHHHHhCccccccccCCCCCce
Q 018699          206 LCLVDWGRGIDLHLFPDN-----MEFEGDCRTSGFRCIEMQEKKPWKFQVDTYGLCAIVHMMLHNSYMEIEKKASPDGGL  280 (351)
Q Consensus       206 ~~l~Dfg~a~~~~~~~~~-----~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~p~~~~~~~~~~~~  280 (351)
                      ++|+|||++.........     .......||+.|+|||++.+..++.++|||||||++|+|++|..||...........
T Consensus       147 ~kL~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~  226 (296)
T 4hgt_A          147 VYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQK  226 (296)
T ss_dssp             EEECCCTTCEECBCTTTCCBCCCCCSCCCCSCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSSSH
T ss_pred             EEEecCccceeccCcccCccCCCCcccccCCCccccchHHhcCCCCCchhHHHHHHHHHHHHhcCCCCCcccchhhhhhh
Confidence            999999998754322211     122355789999999999999999999999999999999999999986543322111


Q ss_pred             ee-----ecCcc---hhhhhHHHHHHHHHHHHhcCCCCCChHHHHHHH
Q 018699          281 VY-----LPKLS---FKRYWKVELWKSLFTNLLNMSSGNDKEVLQNLQ  320 (351)
Q Consensus       281 ~~-----~~~~~---~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~  320 (351)
                      ..     ....+   ....++ +.+.+||.+||+.||++||++.++++
T Consensus       227 ~~~~~~~~~~~~~~~~~~~~~-~~l~~li~~~l~~~p~~Rpt~~~l~~  273 (296)
T 4hgt_A          227 YERISEKKMSTPIEVLCKGYP-SEFATYLNFCRSLRFDDKPDYSYLRQ  273 (296)
T ss_dssp             HHHHHHHHHHSCHHHHTTTSC-HHHHHHHHHHHTSCTTCCCCHHHHHH
T ss_pred             hhhhhcccccchhhhhhccCC-HHHHHHHHHHHhcCCCCCCCHHHHHH
Confidence            10     00011   112223 78999999999999999999988876

>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*

Probab=100.00  E-value=1e-42  Score=311.41  Aligned_cols=268  Identities=19%  Similarity=0.160  Sum_probs=185.4

Q ss_pred             eEEEEcCeeEEEEEEeeccCceEEEEEEecCCCCceEEEEecCCCCCh-HHHHHHHHHhhhccccccccccceeeecccC
Q 018699           41 KTIEIGGKKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFPW-EFYMYRQLDQRISGRERSSFGFAHRIHLYSD  119 (351)
Q Consensus        41 ~~~~i~~~~Y~i~~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~~~-e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  119 (351)
                      ..+.+..++|++.+.||+|+||+||+|. +..+++.||+|++...... ....+...........|++++....++...+
T Consensus         8 ~p~~i~~~~y~~~~~lg~G~~g~V~~~~-~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~   86 (303)
T 2vwi_A            8 LPWSINRDDYELQEVIGSGATAVVQAAY-CAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKD   86 (303)
T ss_dssp             -----CCCCCEEEEECC---CCCEEEEE-C----CEEEEECCC----------------CCCCCCCTTBCCEEEEEESSS
T ss_pred             cccccchhhhhhhheeccccceEEEEEE-ECCCCcEEEEEEEEhhhcchhHHHHHHHHHHHhhcCCCCEeeEEEEEeecC
Confidence            4567788999999999999999999999 5677899999998754221 1111222223344556888888888888888


Q ss_pred             eeEEEEEecCCCCHHHHHHHHHhh----CCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeecc
Q 018699          120 YSILVCDYLSQGTLQDAINSYVVI----GKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDH  195 (351)
Q Consensus       120 ~~~lv~e~~~~~sL~~~l~~~~~~----~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~  195 (351)
                      ..++||||+++++|.+++......    ...+++..++.++.|++.|+.|||++|++|+||+|+||+++           
T Consensus        87 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dl~p~Nil~~-----------  155 (303)
T 2vwi_A           87 ELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKNGQIHRDVKAGNILLG-----------  155 (303)
T ss_dssp             CEEEEEECCTTCBHHHHHHHHHHTTTTTTCSSCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEEC-----------
T ss_pred             CcEEEehhccCCchHHHHHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCCCCChhhEEEc-----------
Confidence            999999999999999999764221    34689999999999999999999999999999999999999           


Q ss_pred             CCCCCcccCCeEEeecCCccccccCC---CCccccccccCCCcccceeccC-CCCCccchHhHHHHHHHHHHhCcccccc
Q 018699          196 DRSGPWQDQGLCLVDWGRGIDLHLFP---DNMEFEGDCRTSGFRCIEMQEK-KPWKFQVDTYGLCAIVHMMLHNSYMEIE  271 (351)
Q Consensus       196 ~~~~~~~~~~~~l~Dfg~a~~~~~~~---~~~~~~~~~g~~~y~aPE~~~~-~~~~~~~DiwslG~il~~l~~g~~p~~~  271 (351)
                            .++.++|+|||++.......   .........|++.|+|||++.+ ..++.++|||||||++|+|++|..||..
T Consensus       156 ------~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~  229 (303)
T 2vwi_A          156 ------EDGSVQIADFGVSAFLATGGDITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHK  229 (303)
T ss_dssp             ------TTCCEEECCCHHHHHCC---------------CCCTTCCHHHHHHHHCCCTHHHHHHHHHHHHHHHHSSCTTTT
T ss_pred             ------CCCCEEEEeccchheeccCCCccchhhhcccCCCccccCHHHhccccCCCchhhHHHHHHHHHHHHhCCCCCcc
Confidence                  77889999999886433211   1112234568999999999865 5678999999999999999999999865


Q ss_pred             ccCCCC---------Cce-eeecCcchhhhhHHHHHHHHHHHHhcCCCCCChHHHHHHHHHHHHHH
Q 018699          272 KKASPD---------GGL-VYLPKLSFKRYWKVELWKSLFTNLLNMSSGNDKEVLQNLQKSFQDYL  327 (351)
Q Consensus       272 ~~~~~~---------~~~-~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~~~~~~~~  327 (351)
                      ......         ... ...........++ +.+.+||.+||+.||.+||++.++++|+|..-.
T Consensus       230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~li~~~l~~dp~~Rps~~~ll~h~~~~~~  294 (303)
T 2vwi_A          230 YPPMKVLMLTLQNDPPSLETGVQDKEMLKKYG-KSFRKMISLCLQKDPEKRPTAAELLRHKFFQKA  294 (303)
T ss_dssp             SCGGGHHHHHHTSSCCCTTC-----CCCCCCC-HHHHHHHHHHCCSSGGGSCCHHHHHTSTTC---
T ss_pred             CchhhHHHHHhccCCCccccccccchhhhhhh-HHHHHHHHHHccCChhhCcCHHHHhhChhhhcC
Confidence            332100         000 0000111112233 788999999999999999999999999875433

>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ...

Probab=100.00  E-value=2.3e-42  Score=317.52  Aligned_cols=249  Identities=19%  Similarity=0.239  Sum_probs=176.3

Q ss_pred             CeeEEEEEEeeccCceEEEEEEecCCCCceEEEEecCCCCChHHHH--HHHHHhhhccccccccccceeeeccc------
Q 018699           47 GKKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFPWEFYM--YRQLDQRISGRERSSFGFAHRIHLYS------  118 (351)
Q Consensus        47 ~~~Y~i~~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~~~e~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~------  118 (351)
                      .++|++.+.||+|+||+||+|. +..+|+.||||++..........  .......+....|++++.+..++...      
T Consensus        28 ~~~y~~~~~lG~G~~g~V~~a~-~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~  106 (367)
T 2fst_X           28 PERYQNLSPVGSGAYGSVCAAF-DTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEF  106 (367)
T ss_dssp             ETTEEEEEECC----CCEEEEE-ETTTTEEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGC
T ss_pred             CCceEEeeEEeecCCeEEEEEE-ECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCccccC
Confidence            4789999999999999999999 57889999999987654432211  11112223444677888777766432      


Q ss_pred             CeeEEEEEecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeeccCCC
Q 018699          119 DYSILVCDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRS  198 (351)
Q Consensus       119 ~~~~lv~e~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~~~  198 (351)
                      ...|+|+|++ +++|.+++..     ..+++..++.++.||+.||.|||++||+||||||+||+++              
T Consensus       107 ~~~~lv~e~~-~~~L~~~~~~-----~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dlkp~NIll~--------------  166 (367)
T 2fst_X          107 NDVYLVTHLM-GADLNNIVKC-----QKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN--------------  166 (367)
T ss_dssp             CCCEEEEECC-CEECC----------CCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEC--------------
T ss_pred             CeEEEEeccc-CCCHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHhhEEEC--------------
Confidence            5679999999 8899998865     5799999999999999999999999999999999999999              


Q ss_pred             CCcccCCeEEeecCCccccccCCCCccccccccCCCcccceeccC-CCCCccchHhHHHHHHHHHHhCccccccccCCCC
Q 018699          199 GPWQDQGLCLVDWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQEK-KPWKFQVDTYGLCAIVHMMLHNSYMEIEKKASPD  277 (351)
Q Consensus       199 ~~~~~~~~~l~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~~DiwslG~il~~l~~g~~p~~~~~~~~~  277 (351)
                         .++.+||+|||++....     .......||+.|+|||++.+ ..++.++|||||||++|+|++|..||........
T Consensus       167 ---~~~~~kL~DFG~a~~~~-----~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~  238 (367)
T 2fst_X          167 ---EDCELKILDFGLARHTA-----DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQ  238 (367)
T ss_dssp             ---TTCCEEECC--------------------CCCTTCCHHHHTTCCSCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHH
T ss_pred             ---CCCCEEEeecccccccc-----ccCCCcCcCcCccChHHHcCCcCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHH
Confidence               77889999999986532     12345678999999999877 6789999999999999999999999965432100


Q ss_pred             Cc----------------------------eeeecCcchhhh---hHHHHHHHHHHHHhcCCCCCChHHHHHHHHHHHH
Q 018699          278 GG----------------------------LVYLPKLSFKRY---WKVELWKSLFTNLLNMSSGNDKEVLQNLQKSFQD  325 (351)
Q Consensus       278 ~~----------------------------~~~~~~~~~~~~---~~~~~~~~li~~~L~~dP~~R~s~~e~l~~~~~~  325 (351)
                      ..                            ....+...++..   .+ +.+.+||.+||..||++|||+.|+|.|||..
T Consensus       239 l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~dLl~~mL~~dP~~R~t~~e~L~hp~~~  316 (367)
T 2fst_X          239 LKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGAN-PLAVDLLEKMLVLDSDKRITAAQALAHAYFA  316 (367)
T ss_dssp             HHHHHHHHCSCCHHHHTTCCCHHHHHHHHTSCCCCCCCHHHHTTTCC-HHHHHHHHHHSCSSGGGSCCHHHHHTSGGGT
T ss_pred             HHHHHHHhCCCCHHHHHHhhhHHHHHHHhccCCCCCCCHHHHCCCCC-HHHHHHHHHhCCCCcccCcCHHHHhcChhhh
Confidence            00                            000011111111   12 6789999999999999999999999998744

>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A*

Probab=100.00  E-value=2.7e-42  Score=310.35  Aligned_cols=261  Identities=13%  Similarity=0.082  Sum_probs=201.1

Q ss_pred             EEEcCeeEEEEEEeeccCceEEEEEEec----CCCCceEEEEecCCCCCh-HHHHHHHHHhhhccccccccccceeeecc
Q 018699           43 IEIGGKKYQIKGCAGQGGFAKVFKAYVN----GDPEDVVALKIQKPAFPW-EFYMYRQLDQRISGRERSSFGFAHRIHLY  117 (351)
Q Consensus        43 ~~i~~~~Y~i~~~lg~G~~g~V~~a~~~----~~~~~~vaiK~~~~~~~~-e~~~~~~~~~~~~~~~~~~~~~~~~~~~~  117 (351)
                      +.+..++|++.+.||+|+||.||+|.+.    ..+++.||+|++...... +...+......+....|++++.+..++..
T Consensus        18 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~   97 (314)
T 2ivs_A           18 WEFPRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQ   97 (314)
T ss_dssp             TBCCGGGEEEEEEEEECSSSEEEEEEEETGGGCSSEEEEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECS
T ss_pred             cccchhheeeeeeecccCCeeEEEEEEeccCcccCcceEEEEeccCCCCHHHHHHHHHHHHHHhhCCCCceeeEEEEEec
Confidence            3556789999999999999999999852    345689999998765432 22223333334455678899998888888


Q ss_pred             cCeeEEEEEecCCCCHHHHHHHHHhh--------------------CCChhHHHHHHHHHHHHHHHHHHHHCCceecCCC
Q 018699          118 SDYSILVCDYLSQGTLQDAINSYVVI--------------------GKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFK  177 (351)
Q Consensus       118 ~~~~~lv~e~~~~~sL~~~l~~~~~~--------------------~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~  177 (351)
                      .+..++||||+++++|.+++......                    ...+++..++.++.||+.||.|||++||+|+|||
T Consensus        98 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dik  177 (314)
T 2ivs_A           98 DGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEMKLVHRDLA  177 (314)
T ss_dssp             SSSCEEEEECCTTCBHHHHHHHTTTSTTEEC----------------CEECHHHHHHHHHHHHHHHHHHHHTTEECCCCS
T ss_pred             CCceEEEEeecCCCCHHHHHHHHhhccCCcccccccccccccccccccCcCHHHHHHHHHHHHHHHHHHHHCCCcccccc
Confidence            88999999999999999999874210                    1348999999999999999999999999999999


Q ss_pred             CCcEEEeecCCcceeeccCCCCCcccCCeEEeecCCccccccCCCCccccccccCCCcccceeccCCCCCccchHhHHHH
Q 018699          178 PDNLLIRYARDELTVLDHDRSGPWQDQGLCLVDWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQEKKPWKFQVDTYGLCA  257 (351)
Q Consensus       178 p~Nill~~~~~~~~~~~~~~~~~~~~~~~~l~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~  257 (351)
                      |+||+++                 .++.++|+|||++................+++.|+|||++.+..++.++|||||||
T Consensus       178 p~NIli~-----------------~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~  240 (314)
T 2ivs_A          178 ARNILVA-----------------EGRKMKISDFGLSRDVYEEDSYVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGV  240 (314)
T ss_dssp             GGGEEEE-----------------TTTEEEECCCTTCEECTTTSCEECSSCCCSCGGGCCHHHHHHCEECHHHHHHHHHH
T ss_pred             hheEEEc-----------------CCCCEEEccccccccccccccceeccCCCCcccccChhhhcCCCcCchhhHHHHHH
Confidence            9999999                 67789999999987543222222223445678899999998888999999999999


Q ss_pred             HHHHHHh-CccccccccCCCCCcee-eecCcchhhhhHHHHHHHHHHHHhcCCCCCChHHHHHHHH
Q 018699          258 IVHMMLH-NSYMEIEKKASPDGGLV-YLPKLSFKRYWKVELWKSLFTNLLNMSSGNDKEVLQNLQK  321 (351)
Q Consensus       258 il~~l~~-g~~p~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~~  321 (351)
                      ++|+|++ |..||............ .......+..++ +.+.+||.+||..||++||++.+++++
T Consensus       241 il~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~li~~~l~~dp~~Rps~~~l~~~  305 (314)
T 2ivs_A          241 LLWEIVTLGGNPYPGIPPERLFNLLKTGHRMERPDNCS-EEMYRLMLQCWKQEPDKRPVFADISKD  305 (314)
T ss_dssp             HHHHHHTTSCCSSTTCCGGGHHHHHHTTCCCCCCTTCC-HHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             HHHHHHhCCCCCCCCCCHHHHHHHhhcCCcCCCCccCC-HHHHHHHHHHccCChhhCcCHHHHHHH
Confidence            9999999 99998754332110000 011122333344 789999999999999999999999876

>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A*

Probab=100.00  E-value=1.6e-41  Score=307.30  Aligned_cols=283  Identities=13%  Similarity=0.137  Sum_probs=197.1

Q ss_pred             cceEEEEcCeeEEEEEEeeccCceEEEEEEecCCCCceEEEEecCCCCChH--HHHHHHHHhhhccccccccccceeeec
Q 018699           39 RNKTIEIGGKKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFPWE--FYMYRQLDQRISGRERSSFGFAHRIHL  116 (351)
Q Consensus        39 ~~~~~~i~~~~Y~i~~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~~~e--~~~~~~~~~~~~~~~~~~~~~~~~~~~  116 (351)
                      ....+.+..++|++.+.||+|+||+||+|. +..+|+.||||++.......  .....++........|++++.+..+..
T Consensus        13 ~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~-~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~h~niv~~~~~~~   91 (327)
T 3aln_A           13 PEQHWDFTAEDLKDLGEIGRGAYGSVNKMV-HKPSGQIMAVKRIRSTVDEKEQKQLLMDLDVVMRSSDCPYIVQFYGALF   91 (327)
T ss_dssp             CCEEECCCSCSEEC-CEEEECSSEEEEEEE-ETTTTEEEEEEEEECCCCHHHHHHHHHHHHHHHSSCCCTTBCCEEEEEE
T ss_pred             hHHhcccCHHHhhehheeccCCCEEEEEEE-EcCCCCEEEEEEeecccCchHHHHHHHHHHHHHHcCCCCcEeeeeeEEE
Confidence            345667778999999999999999999999 56788999999987654332  233333333455667889999999888


Q ss_pred             ccCeeEEEEEecCCCCHHHHHHHHHh-hCCChhHHHHHHHHHHHHHHHHHHHHC-CceecCCCCCcEEEeecCCcceeec
Q 018699          117 YSDYSILVCDYLSQGTLQDAINSYVV-IGKSMEEVLCIYYTIEMLCILESLHDV-GIIHGDFKPDNLLIRYARDELTVLD  194 (351)
Q Consensus       117 ~~~~~~lv~e~~~~~sL~~~l~~~~~-~~~~l~~~~~~~i~~qi~~~l~~LH~~-~i~H~dl~p~Nill~~~~~~~~~~~  194 (351)
                      ..+..++||||+. ++|.+++..... .+..+++..+..++.|++.|+.|||++ ||+|+||+|+||+++          
T Consensus        92 ~~~~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~ivH~dlkp~NIll~----------  160 (327)
T 3aln_A           92 REGDCWICMELMS-TSFDKFYKYVYSVLDDVIPEEILGKITLATVKALNHLKENLKIIHRDIKPSNILLD----------  160 (327)
T ss_dssp             CSSEEEEEECCCS-EEHHHHHHHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHHHSCCCSCCCGGGEEEE----------
T ss_pred             eCCceEEEEeecC-CChHHHHHHHHhhhcccCcHHHHHHHHHHHHHHHHHHhccCCEeECCCCHHHEEEc----------
Confidence            8899999999995 588888775322 246789999999999999999999999 999999999999999          


Q ss_pred             cCCCCCcccCCeEEeecCCccccccCCCCccccccccCCCcccceec----cCCCCCccchHhHHHHHHHHHHhCccccc
Q 018699          195 HDRSGPWQDQGLCLVDWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQ----EKKPWKFQVDTYGLCAIVHMMLHNSYMEI  270 (351)
Q Consensus       195 ~~~~~~~~~~~~~l~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~----~~~~~~~~~DiwslG~il~~l~~g~~p~~  270 (351)
                             .++.++|+|||++.....   ........|++.|+|||++    .+..++.++|||||||++|+|++|..||.
T Consensus       161 -------~~~~~kl~Dfg~~~~~~~---~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~  230 (327)
T 3aln_A          161 -------RSGNIKLCDFGISGQLVD---SIAKTRDAGCRPYMAPERIDPSASRQGYDVRSDVWSLGITLYELATGRFPYP  230 (327)
T ss_dssp             -------TTTEEEECCCSSSCC---------------------------------CCSHHHHHHHHHHHHHHHHSCCCSS
T ss_pred             -------CCCCEEEccCCCceeccc---ccccccCCCCccccCceeeccccCcCCCCchhhHHHHHHHHHHHHHCCCCCC
Confidence                   677899999999864321   2222334689999999998    45678899999999999999999999997


Q ss_pred             cccCCCC--CceeeecCcch----hhhhHHHHHHHHHHHHhcCCCCCChHHHHHHHHHHHHH-HhhChHHHHHHHHHHHH
Q 018699          271 EKKASPD--GGLVYLPKLSF----KRYWKVELWKSLFTNLLNMSSGNDKEVLQNLQKSFQDY-LCSNPQLLKNLKELLAK  343 (351)
Q Consensus       271 ~~~~~~~--~~~~~~~~~~~----~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~~~~~~~-~~~~~~~~~~~~~~~~~  343 (351)
                      .......  ..........+    ...++ +.+.+||.+||..||.+||++.++++|||... .....+....+.++++.
T Consensus       231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~l~~li~~~l~~dp~~Rps~~ell~hp~~~~~~~~~~~~~~~~~~~~~~  309 (327)
T 3aln_A          231 KWNSVFDQLTQVVKGDPPQLSNSEEREFS-PSFINFVNLCLTKDESKRPKYKELLKHPFILMYEERAVEVACYVCKILDQ  309 (327)
T ss_dssp             CC-------CCCCCSCCCCCCCCSSCCCC-HHHHHHHHHHTCSSGGGSCCHHHHTTSHHHHHHHHSCCCHHHHHHHHHHH
T ss_pred             CcchHHHHHHHHhcCCCCCCCCcccccCC-HHHHHHHHHHhhCChhhCcCHHHHHhChHHHHhHhhHHHHHHHHHHHHhc
Confidence            5332100  01111111111    11233 78999999999999999999999999987554 44444566666666665


Q ss_pred             h
Q 018699          344 Q  344 (351)
Q Consensus       344 ~  344 (351)
                      .
T Consensus       310 ~  310 (327)
T 3aln_A          310 M  310 (327)
T ss_dssp             C
T ss_pred             C
Confidence            3

>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A*

Probab=100.00  E-value=4.6e-42  Score=308.74  Aligned_cols=261  Identities=13%  Similarity=0.052  Sum_probs=200.1

Q ss_pred             EEEcCeeEEEEEEeeccCceEEEEEEe----cCCCCceEEEEecCCCCCh-HHHHHHHHHhhhccc-cccccccceeeec
Q 018699           43 IEIGGKKYQIKGCAGQGGFAKVFKAYV----NGDPEDVVALKIQKPAFPW-EFYMYRQLDQRISGR-ERSSFGFAHRIHL  116 (351)
Q Consensus        43 ~~i~~~~Y~i~~~lg~G~~g~V~~a~~----~~~~~~~vaiK~~~~~~~~-e~~~~~~~~~~~~~~-~~~~~~~~~~~~~  116 (351)
                      +++..++|++.+.||+|+||+||+|.+    +..+++.||+|++...... +...+......+... .|++++.+..++.
T Consensus        18 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~   97 (313)
T 1t46_A           18 WEFPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACT   97 (313)
T ss_dssp             GBCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEC
T ss_pred             cccChhhhhHHHhhCccCCcceEEEEEeeccccchhhhhHHHhcCcchhHHHHHHHHHHHHHHhhcccCCCeeeEEEEEe
Confidence            456678999999999999999999985    3567889999998865432 222222222223333 6888999888888


Q ss_pred             ccCeeEEEEEecCCCCHHHHHHHHHh--------------hCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEE
Q 018699          117 YSDYSILVCDYLSQGTLQDAINSYVV--------------IGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLL  182 (351)
Q Consensus       117 ~~~~~~lv~e~~~~~sL~~~l~~~~~--------------~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nil  182 (351)
                      .++..++||||+++++|.+++.....              .+..+++..++.++.|++.||.|||++||+|+||||+||+
T Consensus        98 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil  177 (313)
T 1t46_A           98 IGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNIL  177 (313)
T ss_dssp             SSSSCEEEEECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEE
T ss_pred             cCCCcEEEEecCCCCCHHHHHHhcccccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHCCeecCCCccceEE
Confidence            88899999999999999999987421              0124899999999999999999999999999999999999


Q ss_pred             EeecCCcceeeccCCCCCcccCCeEEeecCCccccccCCCCccccccccCCCcccceeccCCCCCccchHhHHHHHHHHH
Q 018699          183 IRYARDELTVLDHDRSGPWQDQGLCLVDWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQEKKPWKFQVDTYGLCAIVHMM  262 (351)
Q Consensus       183 l~~~~~~~~~~~~~~~~~~~~~~~~l~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~l  262 (351)
                      ++                 .++.++|+|||++................+++.|+|||.+.+..++.++||||||+++|+|
T Consensus       178 ~~-----------------~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el  240 (313)
T 1t46_A          178 LT-----------------HGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWEL  240 (313)
T ss_dssp             EE-----------------TTTEEEECCCGGGSCTTSCTTSEECSSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHH
T ss_pred             Ec-----------------CCCCEEEccccccccccccccceeccCCCCcceeeChHHhcCCCCChHHHHHHHHHHHHHH
Confidence            99                 6778999999998754432222223344567889999999888899999999999999999


Q ss_pred             Hh-CccccccccCCCCCce--eeecCcchhhhhHHHHHHHHHHHHhcCCCCCChHHHHHHHH
Q 018699          263 LH-NSYMEIEKKASPDGGL--VYLPKLSFKRYWKVELWKSLFTNLLNMSSGNDKEVLQNLQK  321 (351)
Q Consensus       263 ~~-g~~p~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~~  321 (351)
                      ++ |..||...........  ........+...+ +.+.+||.+||+.||.+||++.+++++
T Consensus       241 lt~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~l~~li~~~l~~dp~~Rps~~ell~~  301 (313)
T 1t46_A          241 FSLGSSPYPGMPVDSKFYKMIKEGFRMLSPEHAP-AEMYDIMKTCWDADPLKRPTFKQIVQL  301 (313)
T ss_dssp             HTTTCCSSTTCCSSHHHHHHHHHTCCCCCCTTSC-HHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             HhCCCCCCCcccchhHHHHHhccCCCCCCcccCC-HHHHHHHHHHcCCCchhCcCHHHHHHH
Confidence            98 9999875433210000  0001111222333 789999999999999999999999876

>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*

Probab=100.00  E-value=9.7e-43  Score=308.14  Aligned_cols=256  Identities=14%  Similarity=0.117  Sum_probs=197.6

Q ss_pred             CeeEEEEEEeeccCceEEEEEEecCCCCceEEEEecCCCCChH--HHHHHHHHhhhccccccccccceeee--cccCeeE
Q 018699           47 GKKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFPWE--FYMYRQLDQRISGRERSSFGFAHRIH--LYSDYSI  122 (351)
Q Consensus        47 ~~~Y~i~~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~~~e--~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~  122 (351)
                      .++|++.+.||+|+||+||+|. +..+++.||+|++......+  ...+...........|++++.+..+.  ...+..+
T Consensus         5 ~~~y~~~~~lg~G~~g~V~~~~-~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~   83 (279)
T 2w5a_A            5 AEDYEVLYTIGTGSYGRCQKIR-RKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLY   83 (279)
T ss_dssp             GGGEEEEEEEEECSSSEEEEEE-ETTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEEGGGTEEE
T ss_pred             hhheeeehhccCCCCcEEEEEE-ECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhcCCCCCCeEEEEEecCCCceEE
Confidence            4689999999999999999999 56788999999987654322  22222223334445678888887755  3467899


Q ss_pred             EEEEecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCC-----ceecCCCCCcEEEeecCCcceeeccCC
Q 018699          123 LVCDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVG-----IIHGDFKPDNLLIRYARDELTVLDHDR  197 (351)
Q Consensus       123 lv~e~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~-----i~H~dl~p~Nill~~~~~~~~~~~~~~  197 (351)
                      +||||+++++|.+++......+..+++..++.++.|++.||.|||++|     |+|+||+|+||+++             
T Consensus        84 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~ivH~dl~p~NIl~~-------------  150 (279)
T 2w5a_A           84 IVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLD-------------  150 (279)
T ss_dssp             EEEECCTTEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHHC------CCCCCSGGGEEEC-------------
T ss_pred             EEEeCCCCCCHHHHHHhhcccCCCCCHHHHHHHHHHHHHHHHHHhcccCCCCeeEEeccchhhEEEc-------------
Confidence            999999999999999876544566999999999999999999999999     99999999999999             


Q ss_pred             CCCcccCCeEEeecCCccccccCCCCccccccccCCCcccceeccCCCCCccchHhHHHHHHHHHHhCccccccccCCCC
Q 018699          198 SGPWQDQGLCLVDWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQEKKPWKFQVDTYGLCAIVHMMLHNSYMEIEKKASPD  277 (351)
Q Consensus       198 ~~~~~~~~~~l~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~p~~~~~~~~~  277 (351)
                          .++.++|+|||.+.....  .........|++.|+|||++.+..++.++||||||+++|+|++|..||........
T Consensus       151 ----~~~~~kl~dfg~~~~~~~--~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~  224 (279)
T 2w5a_A          151 ----GKQNVKLGDFGLARILNH--DTSFAKTFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKEL  224 (279)
T ss_dssp             ----SSSCEEECCCCHHHHC-----CHHHHHHHSCCTTCCHHHHHCC-CCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHH
T ss_pred             ----CCCCEEEecCchheeecc--ccccccccCCCccccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCcccCHHHH
Confidence                778899999998864321  12223345689999999999988899999999999999999999999875432100


Q ss_pred             Ccee-eecCcchhhhhHHHHHHHHHHHHhcCCCCCChHHHHHHHHHH
Q 018699          278 GGLV-YLPKLSFKRYWKVELWKSLFTNLLNMSSGNDKEVLQNLQKSF  323 (351)
Q Consensus       278 ~~~~-~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~~~~  323 (351)
                      .... .......+..++ +.+.++|.+||+.||.+||++.|++.|+|
T Consensus       225 ~~~i~~~~~~~~~~~~~-~~l~~li~~~l~~~p~~Rps~~~ll~~~~  270 (279)
T 2w5a_A          225 AGKIREGKFRRIPYRYS-DELNEIITRMLNLKDYHRPSVEEILENPL  270 (279)
T ss_dssp             HHHHHHTCCCCCCTTSC-HHHHHHHHHHTCSSGGGSCCHHHHHTSTT
T ss_pred             HHHHhhcccccCCcccC-HHHHHHHHHHcCCCcccCCCHHHHHhChh
Confidence            0000 011112333344 78999999999999999999999999875

>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A*

Probab=100.00  E-value=5.1e-42  Score=311.07  Aligned_cols=256  Identities=14%  Similarity=0.119  Sum_probs=192.4

Q ss_pred             EcCeeEEEEEEeeccCceEEEEEEecCCCCceEEEEecCCCCCh-HHHHHHHHHhhhccccccccccceeeecccCeeEE
Q 018699           45 IGGKKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFPW-EFYMYRQLDQRISGRERSSFGFAHRIHLYSDYSIL  123 (351)
Q Consensus        45 i~~~~Y~i~~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~~~-e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  123 (351)
                      +.+++|++.+.||+|+||+||+|+ +..+++.||||++...... .......+...  ...+++++.+..+...++..++
T Consensus         6 ~~~~~y~~~~~lg~G~~g~V~~~~-~~~~~~~vavK~~~~~~~~~~~~~E~~~l~~--l~~h~~i~~~~~~~~~~~~~~l   82 (330)
T 2izr_A            6 MVGPNFRVGKKIGCGNFGELRLGK-NLYTNEYVAIKLEPMKSRAPQLHLEYRFYKQ--LGSGDGIPQVYYFGPCGKYNAM   82 (330)
T ss_dssp             EETTTEEEEEECCC-CTTSEEEEE-ETTTTEEEEEEEEETTCSSCCHHHHHHHHHH--HCSCTTSCCEEEEEEETTEEEE
T ss_pred             EEcCCeEEEEEeeccCCceEEEEE-ECCCCcEEEEEEeccccchHHHHHHHHHHHH--hhCCCCCCEEEEEEecCCccEE
Confidence            457899999999999999999999 5778999999998644321 11111111111  1256788888888888899999


Q ss_pred             EEEecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeeccCCCCCccc
Q 018699          124 VCDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSGPWQD  203 (351)
Q Consensus       124 v~e~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~~~~~~~~  203 (351)
                      ||||+ +++|.+++...   +..+++..++.++.|++.||.|||++||+||||||+||+++.+...            ..
T Consensus        83 v~e~~-~~~L~~~~~~~---~~~~~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~~------------~~  146 (330)
T 2izr_A           83 VLELL-GPSLEDLFDLC---DRTFSLKTVLMIAIQLISRMEYVHSKNLIYRDVKPENFLIGRPGNK------------TQ  146 (330)
T ss_dssp             EEECC-CCBHHHHHHHT---TTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECCGGGT------------CT
T ss_pred             EEEeC-CCCHHHHHHHc---CCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHeeeccCCCC------------CC
Confidence            99999 99999999874   4689999999999999999999999999999999999999933211            12


Q ss_pred             CCeEEeecCCccccccCCCCc-----cccccccCCCcccceeccCCCCCccchHhHHHHHHHHHHhCccccccccCCCCC
Q 018699          204 QGLCLVDWGRGIDLHLFPDNM-----EFEGDCRTSGFRCIEMQEKKPWKFQVDTYGLCAIVHMMLHNSYMEIEKKASPDG  278 (351)
Q Consensus       204 ~~~~l~Dfg~a~~~~~~~~~~-----~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~p~~~~~~~~~~  278 (351)
                      ..++|+|||++..........     ......||+.|+|||++.+..++.++|||||||++|+|++|..||.........
T Consensus       147 ~~~kl~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~Pf~~~~~~~~~  226 (330)
T 2izr_A          147 QVIHIIDFALAKEYIDPETKKHIPYREHKSLTGTARYMSINTHLGKEQSRRDDLEALGHMFMYFLRGSLPWQGLKADTLK  226 (330)
T ss_dssp             TSEEECCCTTCEESBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCSSHH
T ss_pred             ceEEEEEcccceeeecCCCCccccccccCCcCCCccccChHHHcCCCCCchhHHHHHHHHHHHHhcCCCCccccccccHH
Confidence            339999999997543221111     124567999999999999999999999999999999999999999865432110


Q ss_pred             c-e--eeecC--cchhhh--hHHHHHHHHHHHHhcCCCCCChHHHHHHH
Q 018699          279 G-L--VYLPK--LSFKRY--WKVELWKSLFTNLLNMSSGNDKEVLQNLQ  320 (351)
Q Consensus       279 ~-~--~~~~~--~~~~~~--~~~~~~~~li~~~L~~dP~~R~s~~e~l~  320 (351)
                      . +  .....  .+....  .. +.+.++|.+||..||.+||++.++++
T Consensus       227 ~~~~~i~~~~~~~~~~~~~~~~-p~~~~li~~~l~~~p~~RP~~~~l~~  274 (330)
T 2izr_A          227 ERYQKIGDTKRATPIEVLCENF-PEMATYLRYVRRLDFFEKPDYDYLRK  274 (330)
T ss_dssp             HHHHHHHHHHHHSCHHHHTTTC-HHHHHHHHHHHHCCTTCCCCHHHHHH
T ss_pred             HHHHHHHhhhccCCHHHHhccC-hHHHHHHHHHHhCCCCCCCCHHHHHH
Confidence            0 0  00000  000100  01 38899999999999999999988876

>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A*

Probab=100.00  E-value=1.5e-42  Score=320.85  Aligned_cols=253  Identities=21%  Similarity=0.293  Sum_probs=188.6

Q ss_pred             CeeEEEEEEeeccCceEEEEEEecCCCCceEEEEecCCCCCh------HHHHHHHHHhhhccccccccccceeeecccCe
Q 018699           47 GKKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFPW------EFYMYRQLDQRISGRERSSFGFAHRIHLYSDY  120 (351)
Q Consensus        47 ~~~Y~i~~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~~~------e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  120 (351)
                      .++|++.+.||+|+||+||+|+ +..+++.||||++......      |...+..+.+ .....+.+++.....+...+.
T Consensus        53 ~~~y~~~~~lG~G~~g~V~~~~-~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~-~~~~~~~~iv~~~~~~~~~~~  130 (382)
T 2vx3_A           53 MDRYEIDSLIGKGSFGQVVKAY-DRVEQEWVAIKIIKNKKAFLNQAQIEVRLLELMNK-HDTEMKYYIVHLKRHFMFRNH  130 (382)
T ss_dssp             TTTEEEEEEEEEETTEEEEEEE-ETTTTEEEEEEEECSSHHHHHHHHHHHHHHHHHHH-CSSGGGGGBCCEEEEEEETTE
T ss_pred             eeeEEEEEEEeecCCEEEEEEE-EcCCCcEEEEEEEeccHHHHHHHHHHHHHHHHHHh-cccccceeEEEeeeeeccCCc
Confidence            5799999999999999999999 5778899999998754221      1122222211 112223346666666777889


Q ss_pred             eEEEEEecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHH--HCCceecCCCCCcEEEeecCCcceeeccCCC
Q 018699          121 SILVCDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLH--DVGIIHGDFKPDNLLIRYARDELTVLDHDRS  198 (351)
Q Consensus       121 ~~lv~e~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH--~~~i~H~dl~p~Nill~~~~~~~~~~~~~~~  198 (351)
                      .|+||||+ +++|.+++....  ...+++..++.++.|++.||.|||  +.||+||||||+||+++.+            
T Consensus       131 ~~lv~e~~-~~~L~~~l~~~~--~~~~~~~~~~~i~~qi~~al~~lH~~~~~ivHrDlkp~NIll~~~------------  195 (382)
T 2vx3_A          131 LCLVFEML-SYNLYDLLRNTN--FRGVSLNLTRKFAQQMCTALLFLATPELSIIHCDLKPENILLCNP------------  195 (382)
T ss_dssp             EEEEEECC-CCBHHHHHHHTT--TSCCCHHHHHHHHHHHHHHHHHHTSTTTCEECCCCSGGGEEESST------------
T ss_pred             eEEEEecC-CCCHHHHHhhcC--cCCCCHHHHHHHHHHHHHHHHHhccCCCCEEcCCCCcccEEEecC------------
Confidence            99999999 569999998742  246899999999999999999999  4699999999999999622            


Q ss_pred             CCcccCCeEEeecCCccccccCCCCccccccccCCCcccceeccCCCCCccchHhHHHHHHHHHHhCccccccccCCC--
Q 018699          199 GPWQDQGLCLVDWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQEKKPWKFQVDTYGLCAIVHMMLHNSYMEIEKKASP--  276 (351)
Q Consensus       199 ~~~~~~~~~l~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~p~~~~~~~~--  276 (351)
                         .++.+||+|||++....     .......||+.|+|||++.+..++.++|||||||++|+|++|..||.......  
T Consensus       196 ---~~~~~kL~DFG~a~~~~-----~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~~~  267 (382)
T 2vx3_A          196 ---KRSAIKIVDFGSSCQLG-----QRIYQYIQSRFYRSPEVLLGMPYDLAIDMWSLGCILVEMHTGEPLFSGANEVDQM  267 (382)
T ss_dssp             ---TSCCEEECCCTTCEETT-----CCCCSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHH
T ss_pred             ---CCCcEEEEeccCceecc-----cccccccCCccccChHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHH
Confidence               35679999999986542     22345678999999999999999999999999999999999999997432110  


Q ss_pred             -----------------------------CCceee----------ecC--cchhhh--------------------hHHH
Q 018699          277 -----------------------------DGGLVY----------LPK--LSFKRY--------------------WKVE  295 (351)
Q Consensus       277 -----------------------------~~~~~~----------~~~--~~~~~~--------------------~~~~  295 (351)
                                                   ...+..          .++  ..+...                    ...+
T Consensus       268 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~  347 (382)
T 2vx3_A          268 NKIVEVLGIPPAHILDQAPKARKFFEKLPDGTWNLKKTKDGKREYKPPGTRKLHNILGVETGGPGGRRAGESGHTVADYL  347 (382)
T ss_dssp             HHHHHHHCSCCHHHHTTCTTHHHHEEECTTSCEEECCCCTTCCCSCCTTCSCHHHHHTTTTTSGGGTTTTCTTCCHHHHH
T ss_pred             HHHHHHhCCCCHHHHHhhHHHHHHHHhccccccccccccccccccCCcchhhHHHHhhccccCCCccccccccccchhhH
Confidence                                         000000          000  000000                    0114


Q ss_pred             HHHHHHHHHhcCCCCCChHHHHHHHHHHH
Q 018699          296 LWKSLFTNLLNMSSGNDKEVLQNLQKSFQ  324 (351)
Q Consensus       296 ~~~~li~~~L~~dP~~R~s~~e~l~~~~~  324 (351)
                      .+.+||.+||++||++|||+.|+|+|||.
T Consensus       348 ~~~dli~~mL~~dP~~Rpta~e~L~hp~f  376 (382)
T 2vx3_A          348 KFKDLILRMLDYDPKTRIQPYYALQHSFF  376 (382)
T ss_dssp             HHHHHHHHHTCSCTTTSCCHHHHTTSGGG
T ss_pred             HHHHHHHHhcCCChhhCCCHHHHhcCccc
Confidence            78999999999999999999999999874

>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A*

Probab=100.00  E-value=8.4e-42  Score=308.56  Aligned_cols=269  Identities=19%  Similarity=0.222  Sum_probs=198.4

Q ss_pred             CeeEEEEEEeeccCceEEEEEEecCCCCceEEEEecCCCCCh-----H---HHHHHHHHhhhccccccccccceeeeccc
Q 018699           47 GKKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFPW-----E---FYMYRQLDQRISGRERSSFGFAHRIHLYS  118 (351)
Q Consensus        47 ~~~Y~i~~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~~~-----e---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  118 (351)
                      .++|++.+.||+|+||+||+|. +..+++.||||++......     +   ...+......+....|++++.+..+...+
T Consensus         9 ~~~y~~~~~lg~G~~g~V~~~~-~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~   87 (322)
T 2ycf_A            9 RDEYIMSKTLGSGACGEVKLAF-ERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDAE   87 (322)
T ss_dssp             HHHEEEEEEEEECSSEEEEEEE-ETTTTEEEEEEEECC---------------CHHHHHHHHHHCCCTTBCCEEEEEESS
T ss_pred             hhceeEeeEEecCCCEEEEEEE-EcCCCcEEEEEEeehhhhhhcccccchhhhhHHHHHHHHHhCCCCCCceEeeEEcCC
Confidence            3689999999999999999999 5678899999998653210     0   01111112223344678888877776544


Q ss_pred             CeeEEEEEecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeeccCCC
Q 018699          119 DYSILVCDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRS  198 (351)
Q Consensus       119 ~~~~lv~e~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~~~  198 (351)
                      + .|+||||+++++|.+++..    +..+++..++.++.||+.||.|||++||+|+||+|+||+++.++           
T Consensus        88 ~-~~lv~e~~~~~~L~~~~~~----~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~NIl~~~~~-----------  151 (322)
T 2ycf_A           88 D-YYIVLELMEGGELFDKVVG----NKRLKEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQE-----------  151 (322)
T ss_dssp             S-EEEEEECCTTEETHHHHST----TCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESSSS-----------
T ss_pred             c-eEEEEecCCCCcHHHHHhc----cCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEEecCC-----------
Confidence            4 7999999999999998876    56899999999999999999999999999999999999998432           


Q ss_pred             CCcccCCeEEeecCCccccccCCCCccccccccCCCcccceecc---CCCCCccchHhHHHHHHHHHHhCccccccccCC
Q 018699          199 GPWQDQGLCLVDWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQE---KKPWKFQVDTYGLCAIVHMMLHNSYMEIEKKAS  275 (351)
Q Consensus       199 ~~~~~~~~~l~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~---~~~~~~~~DiwslG~il~~l~~g~~p~~~~~~~  275 (351)
                         ....++|+|||++....   .........|++.|+|||++.   +..++.++|||||||++|+|++|..||......
T Consensus       152 ---~~~~~kl~Dfg~~~~~~---~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~  225 (322)
T 2ycf_A          152 ---EDCLIKITDFGHSKILG---ETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQ  225 (322)
T ss_dssp             ---SSCCEEECCCTTCEECC---CCHHHHHHHSCCTTCCHHHHHHTTTTTCTTHHHHHHHHHHHHHHHHSSCSSCSTTCS
T ss_pred             ---CCCeEEEccCccceecc---cccccccccCCcCccCchhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCCcccchH
Confidence               23459999999986532   222334457899999999973   567889999999999999999999999754432


Q ss_pred             CCCce-eee----cCcchhhhhHHHHHHHHHHHHhcCCCCCChHHHHHHHHHHHHHHhhChHHHHHHHHHHHH
Q 018699          276 PDGGL-VYL----PKLSFKRYWKVELWKSLFTNLLNMSSGNDKEVLQNLQKSFQDYLCSNPQLLKNLKELLAK  343 (351)
Q Consensus       276 ~~~~~-~~~----~~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~~~~~~~~~~~~~~~~~~~~~~~~  343 (351)
                      ..... ...    .........+ +.+.+||.+||..||++||++.++++|+|..    +......+.+++..
T Consensus       226 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~li~~~l~~dP~~Rps~~~~l~h~~~~----~~~~~~~~~~~~~~  293 (322)
T 2ycf_A          226 VSLKDQITSGKYNFIPEVWAEVS-EKALDLVKKLLVVDPKARFTTEEALRHPWLQ----DEDMKRKFQDLLSE  293 (322)
T ss_dssp             SCHHHHHHHTCCCCCHHHHTTSC-HHHHHHHHHHSCSSTTTSCCHHHHHTSGGGC----CHHHHHHHHHHHHH
T ss_pred             HHHHHHHHhCccccCchhhhhcC-HHHHHHHHHHcccCHhhCCCHHHHhhCcCcC----CHHHHHHHHHHhcc
Confidence            11000 000    0111112233 7899999999999999999999999998532    33444555555544

>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7

Probab=100.00  E-value=2.5e-42  Score=314.49  Aligned_cols=261  Identities=12%  Similarity=0.074  Sum_probs=199.9

Q ss_pred             EEEcCeeEEEEEEeeccCceEEEEEEecC----CCCceEEEEecCCCCChH-HHHHHHHHhhhccccccccccceeeecc
Q 018699           43 IEIGGKKYQIKGCAGQGGFAKVFKAYVNG----DPEDVVALKIQKPAFPWE-FYMYRQLDQRISGRERSSFGFAHRIHLY  117 (351)
Q Consensus        43 ~~i~~~~Y~i~~~lg~G~~g~V~~a~~~~----~~~~~vaiK~~~~~~~~e-~~~~~~~~~~~~~~~~~~~~~~~~~~~~  117 (351)
                      +.+..++|++.+.||+|+||+||+|++..    .+++.||+|++......+ ...+...........|++++.+..++..
T Consensus        42 ~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~  121 (343)
T 1luf_A           42 LEYPRNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVKLLGVCAV  121 (343)
T ss_dssp             TBCCGGGCEEEEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECS
T ss_pred             eEecHHHCeeeeeeeecCCeeEEEEEecCcCCCCCceeEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEcc
Confidence            35567899999999999999999999643    456899999998654332 2222333333445578899999998888


Q ss_pred             cCeeEEEEEecCCCCHHHHHHHHHhh--------------------CCChhHHHHHHHHHHHHHHHHHHHHCCceecCCC
Q 018699          118 SDYSILVCDYLSQGTLQDAINSYVVI--------------------GKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFK  177 (351)
Q Consensus       118 ~~~~~lv~e~~~~~sL~~~l~~~~~~--------------------~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~  177 (351)
                      ++..++||||+++++|.+++......                    ...+++..++.++.||+.||.|||++||+|+|||
T Consensus       122 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlk  201 (343)
T 1luf_A          122 GKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSERKFVHRDLA  201 (343)
T ss_dssp             SSSCEEEEECCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCS
T ss_pred             CCceEEEEecCCCCcHHHHHHHhCcccccccccccccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCC
Confidence            88999999999999999999873110                    1568999999999999999999999999999999


Q ss_pred             CCcEEEeecCCcceeeccCCCCCcccCCeEEeecCCccccccCCCCccccccccCCCcccceeccCCCCCccchHhHHHH
Q 018699          178 PDNLLIRYARDELTVLDHDRSGPWQDQGLCLVDWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQEKKPWKFQVDTYGLCA  257 (351)
Q Consensus       178 p~Nill~~~~~~~~~~~~~~~~~~~~~~~~l~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~  257 (351)
                      |+||+++                 .++.++|+|||++................+++.|+|||++.+..++.++|||||||
T Consensus       202 p~NIl~~-----------------~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~  264 (343)
T 1luf_A          202 TRNCLVG-----------------ENMVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGV  264 (343)
T ss_dssp             GGGEEEC-----------------GGGCEEECCCSCHHHHTGGGCBC----CCBCGGGCCHHHHHHCCCCHHHHHHHHHH
T ss_pred             cceEEEC-----------------CCCeEEEeecCCCcccccCccccccCCCcccceecChhhhccCCcCcccccHHHHH
Confidence            9999999                 77889999999986543221112233456788999999998888999999999999


Q ss_pred             HHHHHHh-CccccccccCCCCCcee-eecCcchhhhhHHHHHHHHHHHHhcCCCCCChHHHHHHHH
Q 018699          258 IVHMMLH-NSYMEIEKKASPDGGLV-YLPKLSFKRYWKVELWKSLFTNLLNMSSGNDKEVLQNLQK  321 (351)
Q Consensus       258 il~~l~~-g~~p~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~~  321 (351)
                      ++|+|++ |..||............ .......+..++ +.+.+||.+||..||++||++.+++.+
T Consensus       265 il~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~-~~l~~li~~~l~~~p~~Rps~~~~~~~  329 (343)
T 1luf_A          265 VLWEIFSYGLQPYYGMAHEEVIYYVRDGNILACPENCP-LELYNLMRLCWSKLPADRPSFCSIHRI  329 (343)
T ss_dssp             HHHHHHTTTCCTTTTSCHHHHHHHHHTTCCCCCCTTCC-HHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             HHHHHHhcCCCcCCCCChHHHHHHHhCCCcCCCCCCCC-HHHHHHHHHHcccCcccCCCHHHHHHH
Confidence            9999999 99998654321000000 011112333444 789999999999999999999998765

>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A*

Probab=100.00  E-value=2.9e-42  Score=315.22  Aligned_cols=272  Identities=17%  Similarity=0.208  Sum_probs=191.2

Q ss_pred             CeeEEEEEEeeccCceEEEEEEecCCCCceEEEEecCCCCCh------HHHHHHHHHhhhccccccccccceeeecccCe
Q 018699           47 GKKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFPW------EFYMYRQLDQRISGRERSSFGFAHRIHLYSDY  120 (351)
Q Consensus        47 ~~~Y~i~~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~~~------e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  120 (351)
                      .++|++.+.||+|+||+||+|.+...+++.||+|++......      |...++.+.+.. ...+..+.....++...+.
T Consensus        18 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~~~~-~~~~~~~~~~~~~~~~~~~   96 (355)
T 2eu9_A           18 QERYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNVGKYREAARLEINVLKKIKEKD-KENKFLCVLMSDWFNFHGH   96 (355)
T ss_dssp             TTTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSCHHHHHHHHHHHHHHHHHHHHC-TTSCSCBCCEEEEEEETTE
T ss_pred             cccEEEEEEeeccCCeEEEEEEecCCCceEEEEEEEcccccchhHHHHHHHHHHHHhhcC-CCCceeEEEeeeeeeeCCe
Confidence            579999999999999999999954444579999998754221      233333333321 1112224555566667789


Q ss_pred             eEEEEEecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeecc--CCC
Q 018699          121 SILVCDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDH--DRS  198 (351)
Q Consensus       121 ~~lv~e~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~--~~~  198 (351)
                      .++||||+ +++|.+.+....  ...+++..++.++.||+.||.|||++||+|+||||+||+++..+........  ...
T Consensus        97 ~~lv~e~~-~~~l~~~l~~~~--~~~~~~~~~~~i~~qi~~~L~~lH~~~ivH~Dlkp~NIll~~~~~~~~~~~~~~~~~  173 (355)
T 2eu9_A           97 MCIAFELL-GKNTFEFLKENN--FQPYPLPHVRHMAYQLCHALRFLHENQLTHTDLKPENILFVNSEFETLYNEHKSCEE  173 (355)
T ss_dssp             EEEEEECC-CCBHHHHHHHTT--TCCCCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEESCCCEEEEECCC-CCCE
T ss_pred             EEEEEecc-CCChHHHHHhcc--CCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEecccccccccccccccc
Confidence            99999999 778877776532  2478999999999999999999999999999999999999533211000000  000


Q ss_pred             CCcccCCeEEeecCCccccccCCCCccccccccCCCcccceeccCCCCCccchHhHHHHHHHHHHhCccccccccCCCC-
Q 018699          199 GPWQDQGLCLVDWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQEKKPWKFQVDTYGLCAIVHMMLHNSYMEIEKKASPD-  277 (351)
Q Consensus       199 ~~~~~~~~~l~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~p~~~~~~~~~-  277 (351)
                      ....++.++|+|||++....     .......||+.|+|||++.+..++.++|||||||++|+|++|..||........ 
T Consensus       174 ~~~~~~~~kl~Dfg~~~~~~-----~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~  248 (355)
T 2eu9_A          174 KSVKNTSIRVADFGSATFDH-----EHHTTIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRGFTLFQTHENREHL  248 (355)
T ss_dssp             EEESCCCEEECCCTTCEETT-----SCCCSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHH
T ss_pred             cccCCCcEEEeecCcccccc-----ccccCCcCCCcccCCeeeecCCCCCccchHHHHHHHHHHHhCCCCCCCCCHHHHH
Confidence            01156789999999986432     223445789999999999999999999999999999999999999965332100 


Q ss_pred             -------C-------------------ceeeecCcc----------------hhhhhHHHHHHHHHHHHhcCCCCCChHH
Q 018699          278 -------G-------------------GLVYLPKLS----------------FKRYWKVELWKSLFTNLLNMSSGNDKEV  315 (351)
Q Consensus       278 -------~-------------------~~~~~~~~~----------------~~~~~~~~~~~~li~~~L~~dP~~R~s~  315 (351)
                             +                   ...+.....                .........+.+||.+||+.||.+|||+
T Consensus       249 ~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~  328 (355)
T 2eu9_A          249 VMMEKILGPIPSHMIHRTRKQKYFYKGGLVWDENSSDGRYVKENCKPLKSYMLQDSLEHVQLFDLMRRMLEFDPAQRITL  328 (355)
T ss_dssp             HHHHHHHCCCCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTCSSTTTSCCH
T ss_pred             HHHHHHcCCCcHHHhhhccchhhhcccccccccccchhccccccCCcccccccccchhHHHHHHHHHHHhcCChhhCcCH
Confidence                   0                   000000000                0000111578999999999999999999


Q ss_pred             HHHHHHHHHHHH
Q 018699          316 LQNLQKSFQDYL  327 (351)
Q Consensus       316 ~e~l~~~~~~~~  327 (351)
                      .|+++|||..-+
T Consensus       329 ~e~l~hp~f~~~  340 (355)
T 2eu9_A          329 AEALLHPFFAGL  340 (355)
T ss_dssp             HHHTTSGGGGGC
T ss_pred             HHHhcChhhcCC
Confidence            999999875543

>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*

Probab=100.00  E-value=3.6e-42  Score=307.36  Aligned_cols=253  Identities=19%  Similarity=0.190  Sum_probs=196.3

Q ss_pred             cCeeEEEEEEeeccCceEEEEEEecCCCCceEEEEecCCCCC-----hHH-HHHHHHH---hhhccc-cccccccceeee
Q 018699           46 GGKKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFP-----WEF-YMYRQLD---QRISGR-ERSSFGFAHRIH  115 (351)
Q Consensus        46 ~~~~Y~i~~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~~-----~e~-~~~~~~~---~~~~~~-~~~~~~~~~~~~  115 (351)
                      ..++|++.+.||+|++|.||+|. +..+++.||||++.....     .+. .....+.   ..+... .|++++.+..+.
T Consensus        15 ~~~~y~~~~~lg~G~~g~V~~~~-~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~   93 (298)
T 1phk_A           15 FYENYEPKEILGRGVSSVVRRCI-HKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTY   93 (298)
T ss_dssp             CTTTEEEEEEEEECSSEEEEEEE-ETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEE
T ss_pred             hhhccceeeeecCCCceEEEEEE-EcCcCceEEEEEEecccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeeeeeee
Confidence            35799999999999999999999 567889999999865431     111 1111111   112222 478888888888


Q ss_pred             cccCeeEEEEEecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeecc
Q 018699          116 LYSDYSILVCDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDH  195 (351)
Q Consensus       116 ~~~~~~~lv~e~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~  195 (351)
                      ...+..++||||+++++|.+++..    +..+++..++.++.|++.||.|||++|++|+||+|+||+++           
T Consensus        94 ~~~~~~~lv~e~~~~~~L~~~l~~----~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nil~~-----------  158 (298)
T 1phk_A           94 ETNTFFFLVFDLMKKGELFDYLTE----KVTLSEKETRKIMRALLEVICALHKLNIVHRDLKPENILLD-----------  158 (298)
T ss_dssp             ECSSEEEEEEECCTTCBHHHHHHH----HSSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEC-----------
T ss_pred             ccCCeEEEEEeccCCCcHHHHHhc----cCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCcceEEEc-----------
Confidence            888999999999999999999987    36799999999999999999999999999999999999998           


Q ss_pred             CCCCCcccCCeEEeecCCccccccCCCCccccccccCCCcccceecc------CCCCCccchHhHHHHHHHHHHhCcccc
Q 018699          196 DRSGPWQDQGLCLVDWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQE------KKPWKFQVDTYGLCAIVHMMLHNSYME  269 (351)
Q Consensus       196 ~~~~~~~~~~~~l~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~------~~~~~~~~DiwslG~il~~l~~g~~p~  269 (351)
                            .++.++|+|||++....   .........+++.|+|||++.      ...++.++||||||+++|+|++|..||
T Consensus       159 ------~~~~~kl~dfg~~~~~~---~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~  229 (298)
T 1phk_A          159 ------DDMNIKLTDFGFSCQLD---PGEKLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPF  229 (298)
T ss_dssp             ------TTCCEEECCCTTCEECC---TTCCBCCCCSCGGGCCHHHHHHHHCTTSCCBCTHHHHHHHHHHHHHHHHSSCSS
T ss_pred             ------CCCcEEEecccchhhcC---CCcccccccCCccccCHHHhccccccccccCCcccccHhHHHHHHHHHHCCCCC
Confidence                  77889999999986533   223344567899999999984      456789999999999999999999998


Q ss_pred             ccccCCCCCcee----eecCcchhhhhHHHHHHHHHHHHhcCCCCCChHHHHHHHHHHH
Q 018699          270 IEKKASPDGGLV----YLPKLSFKRYWKVELWKSLFTNLLNMSSGNDKEVLQNLQKSFQ  324 (351)
Q Consensus       270 ~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~~~~~  324 (351)
                      ............    .....+....++ +.+.+||.+||+.||.+||++.|+++|+|.
T Consensus       230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~l~~li~~~l~~dp~~Rps~~~ll~h~~~  287 (298)
T 1phk_A          230 WHRKQMLMLRMIMSGNYQFGSPEWDDYS-DTVKDLVSRFLVVQPQKRYTAEEALAHPFF  287 (298)
T ss_dssp             CCSSHHHHHHHHHHTCCCCCTTTGGGSC-HHHHHHHHHHCCSSGGGSCCHHHHTTSGGG
T ss_pred             cCccHHHHHHHHhcCCcccCcccccccC-HHHHHHHHHHccCCcccCCCHHHHHhChHh
Confidence            654321000000    001111112233 789999999999999999999999999864

>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*

Probab=100.00  E-value=1.3e-41  Score=306.07  Aligned_cols=265  Identities=17%  Similarity=0.177  Sum_probs=190.9

Q ss_pred             cCCCcceEEEEcCeeEEEEEEeeccCceEEEEEEecCCCCceEEEEecCCCCChH--HHHHHHHHhhhccc--ccccccc
Q 018699           35 NNSSRNKTIEIGGKKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFPWE--FYMYRQLDQRISGR--ERSSFGF  110 (351)
Q Consensus        35 ~~~~~~~~~~i~~~~Y~i~~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~~~e--~~~~~~~~~~~~~~--~~~~~~~  110 (351)
                      .+...-..+.+.+++|++.+.||+|+||+||+|.+  .+++.||+|++.......  ...+......+...  .+++++.
T Consensus        15 ~~~~~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~--~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~   92 (313)
T 3cek_A           15 TENLYFQSMSVKGRIYSILKQIGSGGSSKVFQVLN--EKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIR   92 (313)
T ss_dssp             -----CCEEEETTEEEEEEEEEECCSSEEEEEEEC--TTCCEEEEEEEECSSCCHHHHHHHHHHHHHHHHHGGGCTTBCC
T ss_pred             CCCCCeeeeeeccceEEEEEEecCCCCEEEEEEEc--CCCcEEEEEEeccccccccchHHHHHHHHHHHhccccCCceEE
Confidence            33344557889999999999999999999999994  348899999986543322  11111111112222  2467778


Q ss_pred             ceeeecccCeeEEEEEecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcc
Q 018699          111 AHRIHLYSDYSILVCDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDEL  190 (351)
Q Consensus       111 ~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~  190 (351)
                      ...+....+..++|||+ .+++|.+++..    ...+++..++.++.|++.||.|||++||+|+||+|+||+++      
T Consensus        93 ~~~~~~~~~~~~lv~e~-~~~~L~~~l~~----~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIl~~------  161 (313)
T 3cek_A           93 LYDYEITDQYIYMVMEC-GNIDLNSWLKK----KKSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIV------  161 (313)
T ss_dssp             EEEEEECSSEEEEEECC-CSEEHHHHHHH----CSSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEE------
T ss_pred             EEEEeecCCEEEEEEec-CCCcHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCcccEEEE------
Confidence            88888888899999995 48899999987    56889999999999999999999999999999999999997      


Q ss_pred             eeeccCCCCCcccCCeEEeecCCccccccCCCCccccccccCCCcccceeccC-----------CCCCccchHhHHHHHH
Q 018699          191 TVLDHDRSGPWQDQGLCLVDWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQEK-----------KPWKFQVDTYGLCAIV  259 (351)
Q Consensus       191 ~~~~~~~~~~~~~~~~~l~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~-----------~~~~~~~DiwslG~il  259 (351)
                                 . +.++|+|||++................|++.|+|||++.+           ..++.++||||||+++
T Consensus       162 -----------~-~~~kL~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~Di~slG~il  229 (313)
T 3cek_A          162 -----------D-GMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCIL  229 (313)
T ss_dssp             -----------T-TEEEECCCSSSCC--------------CCGGGCCHHHHTTCC----------CCCHHHHHHHHHHHH
T ss_pred             -----------C-CeEEEeeccccccccCccccccccCCCCCCCcCCHHHHhhcccccccccccccCCchHHHHHHHHHH
Confidence                       2 5699999999865432222222334578999999999865           4678899999999999


Q ss_pred             HHHHhCccccccccCCCCC---ceeeecCcchhhhhHHHHHHHHHHHHhcCCCCCChHHHHHHHHHHHH
Q 018699          260 HMMLHNSYMEIEKKASPDG---GLVYLPKLSFKRYWKVELWKSLFTNLLNMSSGNDKEVLQNLQKSFQD  325 (351)
Q Consensus       260 ~~l~~g~~p~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~~~~~~  325 (351)
                      |+|++|..||.........   ..........+...+ +.+.+||.+||..||.+||++.|+++|+|..
T Consensus       230 ~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~l~~li~~~l~~dp~~Rps~~ell~h~~~~  297 (313)
T 3cek_A          230 YYMTYGKTPFQQIINQISKLHAIIDPNHEIEFPDIPE-KDLQDVLKCCLKRDPKQRISIPELLAHPYVQ  297 (313)
T ss_dssp             HHHHHSSCTTTTCCSHHHHHHHHHCTTSCCCCCCCSC-HHHHHHHHHHTCSSTTTSCCHHHHHTSHHHH
T ss_pred             HHHHhCCCchhhHHHHHHHHHHHHhcccccCCcccch-HHHHHHHHHHccCCcccCcCHHHHhcCcccc
Confidence            9999999999643221000   000001112222223 7899999999999999999999999998754

>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ...

Probab=100.00  E-value=4.8e-42  Score=309.03  Aligned_cols=263  Identities=13%  Similarity=0.098  Sum_probs=198.7

Q ss_pred             EEEEcCeeEEEEEEeeccCceEEEEEEe----cCCCCceEEEEecCCCCChHH--HHHHHHHhhhccccccccccceeee
Q 018699           42 TIEIGGKKYQIKGCAGQGGFAKVFKAYV----NGDPEDVVALKIQKPAFPWEF--YMYRQLDQRISGRERSSFGFAHRIH  115 (351)
Q Consensus        42 ~~~i~~~~Y~i~~~lg~G~~g~V~~a~~----~~~~~~~vaiK~~~~~~~~e~--~~~~~~~~~~~~~~~~~~~~~~~~~  115 (351)
                      .+.+..++|++.+.||+|+||+||+|.+    +..+++.||+|++........  ...+++........|++++.+..+.
T Consensus        21 ~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~  100 (316)
T 2xir_A           21 KWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGAC  100 (316)
T ss_dssp             HHBCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEE
T ss_pred             ceecchhheeeeeEEcCCCceeEEEEEEecCCccccceEEEEEecccCCCcHHHHHHHHHHHHHHhcccCCCeeeEEEEE
Confidence            3456678999999999999999999985    235678999999886644321  1222222222222577888887776


Q ss_pred             cc-cCeeEEEEEecCCCCHHHHHHHHHhh------------CCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEE
Q 018699          116 LY-SDYSILVCDYLSQGTLQDAINSYVVI------------GKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLL  182 (351)
Q Consensus       116 ~~-~~~~~lv~e~~~~~sL~~~l~~~~~~------------~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nil  182 (351)
                      .. +...++||||+++++|.+++......            ...+++..++.++.|++.|+.|||++||+|+||||+||+
T Consensus       101 ~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~H~dikp~Nil  180 (316)
T 2xir_A          101 TKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNIL  180 (316)
T ss_dssp             CCTTSCCEEEEECCTTEEHHHHHHTCTTSEECC-------CTTCEEHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEE
T ss_pred             ecCCCceEEEEEcCCCCcHHHHHHhcccccccccccchhhhccccCHHHHHHHHHHHHHHHHHHHhCCcccccCccceEE
Confidence            54 45689999999999999999874210            112899999999999999999999999999999999999


Q ss_pred             EeecCCcceeeccCCCCCcccCCeEEeecCCccccccCCCCccccccccCCCcccceeccCCCCCccchHhHHHHHHHHH
Q 018699          183 IRYARDELTVLDHDRSGPWQDQGLCLVDWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQEKKPWKFQVDTYGLCAIVHMM  262 (351)
Q Consensus       183 l~~~~~~~~~~~~~~~~~~~~~~~~l~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~l  262 (351)
                      ++                 .++.++|+|||++................+++.|+|||++.+..++.++|||||||++|+|
T Consensus       181 ~~-----------------~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l  243 (316)
T 2xir_A          181 LS-----------------EKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEI  243 (316)
T ss_dssp             EC-----------------GGGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHH
T ss_pred             EC-----------------CCCCEEECCCccccccccCccceeccCCCcceeecCchhhccccccchhHHHHHHHHHHHH
Confidence            98                 7788999999998754333222333445678899999999988999999999999999999


Q ss_pred             Hh-CccccccccCCCCC--ceeeecCcchhhhhHHHHHHHHHHHHhcCCCCCChHHHHHHHHH
Q 018699          263 LH-NSYMEIEKKASPDG--GLVYLPKLSFKRYWKVELWKSLFTNLLNMSSGNDKEVLQNLQKS  322 (351)
Q Consensus       263 ~~-g~~p~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~~~  322 (351)
                      ++ |..||.........  ..........+...+ +.+.++|.+||..||.+||++.+++.+.
T Consensus       244 ~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~l~~li~~~l~~dp~~Rps~~ell~~L  305 (316)
T 2xir_A          244 FSLGASPYPGVKIDEEFCRRLKEGTRMRAPDYTT-PEMYQTMLDCWHGEPSQRPTFSELVEHL  305 (316)
T ss_dssp             HTTSCCSSTTCCCSHHHHHHHHHTCCCCCCTTCC-HHHHHHHHHHTCSSGGGSCCHHHHHHHH
T ss_pred             HhCCCCCCcccchhHHHHHHhccCccCCCCCCCC-HHHHHHHHHHcCCChhhCcCHHHHHHHH
Confidence            98 99998654322100  000011122333344 7899999999999999999999999873

>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A*

Probab=100.00  E-value=3.5e-42  Score=305.12  Aligned_cols=257  Identities=14%  Similarity=0.115  Sum_probs=186.3

Q ss_pred             EEEEcCeeEEEEEEeeccCceEEEEEEecC--CCCceEEEEecCCCCChH-HHHHHHHHhhhccccccccccceeeeccc
Q 018699           42 TIEIGGKKYQIKGCAGQGGFAKVFKAYVNG--DPEDVVALKIQKPAFPWE-FYMYRQLDQRISGRERSSFGFAHRIHLYS  118 (351)
Q Consensus        42 ~~~i~~~~Y~i~~~lg~G~~g~V~~a~~~~--~~~~~vaiK~~~~~~~~e-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  118 (351)
                      ..++..++|++.+.||+|+||+||+|.+..  ..+..||+|+........ .+.+...........|++++.+..+.. .
T Consensus         9 ~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~   87 (281)
T 1mp8_A            9 DYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVIT-E   87 (281)
T ss_dssp             CCBCCGGGEEEEEEEEECSSSEEEEEEECCC--CCEEEEEEECTTTTSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEC-S
T ss_pred             ceEEehHHeEEEeEeeecCCeeEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCccceEEEEEc-c
Confidence            345677899999999999999999999632  245679999987643322 222222223344556888888877763 5


Q ss_pred             CeeEEEEEecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeeccCCC
Q 018699          119 DYSILVCDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRS  198 (351)
Q Consensus       119 ~~~~lv~e~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~~~  198 (351)
                      +..|+||||+++++|.+++...   +..+++..++.++.|++.||.|||++||+|+||||+||+++              
T Consensus        88 ~~~~lv~e~~~~~~L~~~l~~~---~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~--------------  150 (281)
T 1mp8_A           88 NPVWIIMELCTLGELRSFLQVR---KYSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVS--------------  150 (281)
T ss_dssp             SSCEEEEECCTTEEHHHHHHHT---TTTSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEE--------------
T ss_pred             CccEEEEecCCCCCHHHHHHhc---CCCCCHHHHHHHHHHHHHHHHHHHhCCeecccccHHHEEEC--------------
Confidence            6789999999999999999864   45789999999999999999999999999999999999999              


Q ss_pred             CCcccCCeEEeecCCccccccCCCCccccccccCCCcccceeccCCCCCccchHhHHHHHHHHHHh-CccccccccCCCC
Q 018699          199 GPWQDQGLCLVDWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQEKKPWKFQVDTYGLCAIVHMMLH-NSYMEIEKKASPD  277 (351)
Q Consensus       199 ~~~~~~~~~l~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~-g~~p~~~~~~~~~  277 (351)
                         .++.++|+|||++....... ........+++.|+|||++.+..++.++|||||||++|+|++ |..||........
T Consensus       151 ---~~~~~kl~Dfg~~~~~~~~~-~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~pf~~~~~~~~  226 (281)
T 1mp8_A          151 ---SNDCVKLGDFGLSRYMEDST-YYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDV  226 (281)
T ss_dssp             ---ETTEEEECC--------------------CCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGH
T ss_pred             ---CCCCEEECccccccccCccc-ccccccCCCcccccChhhcccCCCCCccCchHHHHHHHHHHhcCCCCCCcCCHHHH
Confidence               66779999999986543211 111223346778999999998889999999999999999996 8999875433210


Q ss_pred             Ccee-eecCcchhhhhHHHHHHHHHHHHhcCCCCCChHHHHHHHH
Q 018699          278 GGLV-YLPKLSFKRYWKVELWKSLFTNLLNMSSGNDKEVLQNLQK  321 (351)
Q Consensus       278 ~~~~-~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~~  321 (351)
                      .... .....+.+...+ +.+.++|.+||..||++||++.+++.+
T Consensus       227 ~~~i~~~~~~~~~~~~~-~~l~~li~~~l~~~p~~Rps~~~l~~~  270 (281)
T 1mp8_A          227 IGRIENGERLPMPPNCP-PTLYSLMTKCWAYDPSRRPRFTELKAQ  270 (281)
T ss_dssp             HHHHHTTCCCCCCTTCC-HHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             HHHHHcCCCCCCCCCCC-HHHHHHHHHHccCChhhCcCHHHHHHH
Confidence            0000 011122333344 789999999999999999999998875

>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*

Probab=100.00  E-value=9.4e-43  Score=321.57  Aligned_cols=258  Identities=11%  Similarity=0.080  Sum_probs=197.3

Q ss_pred             EEEEcCeeEEEEEEeeccCceEEEEEEecCCCCceEEEEecCCCCChHH-HHHHHHHhhhccccccccccceeeecccCe
Q 018699           42 TIEIGGKKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFPWEF-YMYRQLDQRISGRERSSFGFAHRIHLYSDY  120 (351)
Q Consensus        42 ~~~i~~~~Y~i~~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~~~e~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  120 (351)
                      .+.+..++|++.+.||+|+||+||+|.+ ..+++.||||++......+. ..+...........|++++.+..+...++.
T Consensus       108 ~~~~~~~~~~~~~~lG~G~~g~V~~~~~-~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~  186 (377)
T 3cbl_A          108 KWVLNHEDLVLGEQIGRGNFGEVFSGRL-RADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQP  186 (377)
T ss_dssp             TTBCCGGGEEEEEEEEEETTEEEEEEEE-TTTCCEEEEEECCTTSCHHHHTTTTHHHHHHTTCCCTTBCCEEEEECSSSS
T ss_pred             ccEEchHHeEEeeEeccCCCCeEEEEEE-ecCCeEEEEEEccccCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEecCCC
Confidence            3456778999999999999999999994 56789999999876533221 111122233345578899999888888888


Q ss_pred             eEEEEEecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeeccCCCCC
Q 018699          121 SILVCDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSGP  200 (351)
Q Consensus       121 ~~lv~e~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~~~~~  200 (351)
                      .|+||||+++++|.+++...   +..+++..+..++.|++.|++|||++||+||||||+||+++                
T Consensus       187 ~~lv~e~~~~g~L~~~l~~~---~~~~~~~~~~~~~~qi~~~l~~LH~~~ivHrDlkp~Nil~~----------------  247 (377)
T 3cbl_A          187 IYIVMELVQGGDFLTFLRTE---GARLRVKTLLQMVGDAAAGMEYLESKCCIHRDLAARNCLVT----------------  247 (377)
T ss_dssp             CEEEEECCTTCBHHHHHHHH---GGGCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEC----------------
T ss_pred             cEEEEEcCCCCCHHHHHHhc---CCCCCHHHHHHHHHHHHHHHHHHHHCCcCCcccCHHHEEEc----------------
Confidence            99999999999999999865   45789999999999999999999999999999999999999                


Q ss_pred             cccCCeEEeecCCccccccCCCCccccccccCCCcccceeccCCCCCccchHhHHHHHHHHHHh-CccccccccCCCCCc
Q 018699          201 WQDQGLCLVDWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQEKKPWKFQVDTYGLCAIVHMMLH-NSYMEIEKKASPDGG  279 (351)
Q Consensus       201 ~~~~~~~l~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~-g~~p~~~~~~~~~~~  279 (351)
                       .++.+||+|||++................+++.|+|||.+.+..++.++|||||||++|+|++ |..||..........
T Consensus       248 -~~~~~kl~DfG~s~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~el~t~g~~p~~~~~~~~~~~  326 (377)
T 3cbl_A          248 -EKNVLKISDFGMSREEADGVYAASGGLRQVPVKWTAPEALNYGRYSSESDVWSFGILLWETFSLGASPYPNLSNQQTRE  326 (377)
T ss_dssp             -TTCCEEECCGGGCEECTTSEEECCSSCCEEEGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCSSTTSCHHHHHH
T ss_pred             -CCCcEEECcCCCceecCCCceeecCCCCCCCcCcCCHhHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHH
Confidence             778899999999864321100000111234667999999988889999999999999999998 999986543210000


Q ss_pred             e-eeecCcchhhhhHHHHHHHHHHHHhcCCCCCChHHHHHHHH
Q 018699          280 L-VYLPKLSFKRYWKVELWKSLFTNLLNMSSGNDKEVLQNLQK  321 (351)
Q Consensus       280 ~-~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~~  321 (351)
                      . ......+.+..++ +.+.+||.+||+.||++|||+.+++..
T Consensus       327 ~~~~~~~~~~~~~~~-~~l~~li~~cl~~dP~~Rps~~~i~~~  368 (377)
T 3cbl_A          327 FVEKGGRLPCPELCP-DAVFRLMEQCWAYEPGQRPSFSTIYQE  368 (377)
T ss_dssp             HHHTTCCCCCCTTCC-HHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             HHHcCCCCCCCCCCC-HHHHHHHHHHcCCCchhCcCHHHHHHH
Confidence            0 0011222333444 789999999999999999999998764

>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A*

Probab=100.00  E-value=3.4e-42  Score=306.09  Aligned_cols=255  Identities=18%  Similarity=0.206  Sum_probs=197.3

Q ss_pred             CeeEEEEEEeeccCceEEEEEEecCCCCceEEEEecCCCCC--hHHHHHHHHHhhhccccccccccceeeecccCeeEEE
Q 018699           47 GKKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFP--WEFYMYRQLDQRISGRERSSFGFAHRIHLYSDYSILV  124 (351)
Q Consensus        47 ~~~Y~i~~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~~--~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv  124 (351)
                      .++|++.+.||+|++|+||+|+ +..+++.||+|++.....  .....+......+....+++++.+..+....+..++|
T Consensus        21 ~~~y~i~~~lg~G~~g~V~~~~-~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv   99 (287)
T 2wei_A           21 AERYNIVCMLGKGSFGEVLKCK-DRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIV   99 (287)
T ss_dssp             HHHEEEEEEEEEETTEEEEEEE-ETTTCCEEEEEEEEGGGBSSSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred             hhcceeeEEEcCCCCEEEEEEE-EcCCCcEEEEEEecccccchHHHHHHHHHHHHHHhccCCCccEEEEEEeCCCeEEEE
Confidence            3689999999999999999999 567789999999754321  1122222222334455788888888888888999999


Q ss_pred             EEecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeeccCCCCCcccC
Q 018699          125 CDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSGPWQDQ  204 (351)
Q Consensus       125 ~e~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~~~~~~~~~  204 (351)
                      |||+++++|.+.+...    ..+++..++.++.|++.|+.|||++|++|+||+|+||+++.++              .++
T Consensus       100 ~e~~~~~~L~~~l~~~----~~~~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~NIlv~~~~--------------~~~  161 (287)
T 2wei_A          100 GELYTGGELFDEIIKR----KRFSEHDAARIIKQVFSGITYMHKHNIVHRDLKPENILLESKE--------------KDC  161 (287)
T ss_dssp             ECCCCSCBHHHHHHHH----SSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESCSS--------------TTC
T ss_pred             EEccCCCCHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCChhhEEEecCC--------------Ccc
Confidence            9999999999988763    6799999999999999999999999999999999999998432              345


Q ss_pred             CeEEeecCCccccccCCCCccccccccCCCcccceeccCCCCCccchHhHHHHHHHHHHhCccccccccCCC------CC
Q 018699          205 GLCLVDWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQEKKPWKFQVDTYGLCAIVHMMLHNSYMEIEKKASP------DG  278 (351)
Q Consensus       205 ~~~l~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~p~~~~~~~~------~~  278 (351)
                      .++|+|||++....   .........+++.|+|||++.+. ++.++||||||+++|+|++|..||.......      .+
T Consensus       162 ~~kL~Dfg~~~~~~---~~~~~~~~~~~~~y~aPE~~~~~-~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~  237 (287)
T 2wei_A          162 DIKIIDFGLSTCFQ---QNTKMKDRIGTAYYIAPEVLRGT-YDEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRVETG  237 (287)
T ss_dssp             CEEECSTTGGGTBC---CCSSCSCHHHHHTTCCHHHHTTC-CCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHC
T ss_pred             cEEEeccCcceeec---CCCccccccCcccccChHHhcCC-CCCchhhHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHcC
Confidence            69999999886533   22223344578999999998764 7899999999999999999999986543210      01


Q ss_pred             ceeeecCcchhhhhHHHHHHHHHHHHhcCCCCCChHHHHHHHHHHHHHH
Q 018699          279 GLVYLPKLSFKRYWKVELWKSLFTNLLNMSSGNDKEVLQNLQKSFQDYL  327 (351)
Q Consensus       279 ~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~~~~~~~~  327 (351)
                      ..  ....+.....+ +.+.+||.+||.+||++||++.|++.|||..-+
T Consensus       238 ~~--~~~~~~~~~~~-~~~~~li~~~l~~dp~~Rps~~ell~hp~~~~~  283 (287)
T 2wei_A          238 KY--AFDLPQWRTIS-DDAKDLIRKMLTFHPSLRITATQCLEHPWIQKY  283 (287)
T ss_dssp             CC--CCCSGGGTTSC-HHHHHHHHHHTCSSGGGSCCHHHHHHSHHHHHH
T ss_pred             CC--CCCchhhhhcC-HHHHHHHHHHcccChhhCcCHHHHhcCHHHhcc
Confidence            10  01111112233 789999999999999999999999999876544

>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A*

Probab=100.00  E-value=5.1e-42  Score=310.46  Aligned_cols=260  Identities=15%  Similarity=0.118  Sum_probs=200.6

Q ss_pred             EEEEcCeeEEEEEEeeccCceEEEEEEecCCCCceEEEEecCCCCChH--HHHHHHHHhhhccccccccccceeeecccC
Q 018699           42 TIEIGGKKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFPWE--FYMYRQLDQRISGRERSSFGFAHRIHLYSD  119 (351)
Q Consensus        42 ~~~i~~~~Y~i~~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~~~e--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  119 (351)
                      .+.+..++|++.+.||+|+||+||+|++  .+++.||+|++.......  ....++ ........|++++.+..++...+
T Consensus        24 ~~~~~~~~y~~~~~lg~G~~g~V~~~~~--~~~~~vavK~~~~~~~~~~~~~~~~e-~~~l~~l~h~~iv~~~~~~~~~~  100 (326)
T 3uim_A           24 ELQVASDNFSNKNILGRGGFGKVYKGRL--ADGTLVAVKRLKEERTQGGELQFQTE-VEMISMAVHRNLLRLRGFCMTPT  100 (326)
T ss_dssp             HHHTTTTSSCSTTEEECCSSSEEEEECC--SSSCCEEEEECCC-----CCCHHHHH-HHGGGTCCCTTBCCCCEEECCSS
T ss_pred             HHHHHhhccccceeEecCCCcEEEEEEe--cCCCEEEEEEeccccCchHHHHHHHH-HHHHHhccCCCccceEEEEecCC
Confidence            3445678999999999999999999983  458899999987643221  122222 23345566889999998888888


Q ss_pred             eeEEEEEecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHC---CceecCCCCCcEEEeecCCcceeeccC
Q 018699          120 YSILVCDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDV---GIIHGDFKPDNLLIRYARDELTVLDHD  196 (351)
Q Consensus       120 ~~~lv~e~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~---~i~H~dl~p~Nill~~~~~~~~~~~~~  196 (351)
                      ..++||||+++++|.+++......+..+++..++.++.|++.||.|||++   ||+|+||||+||+++            
T Consensus       101 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~Dlkp~Nil~~------------  168 (326)
T 3uim_A          101 ERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLD------------  168 (326)
T ss_dssp             CCEEEEECCTTCBHHHHHHCCSTTCCCCCHHHHHHHHHHHHHHHHHHHHSSSSCEECCCCSGGGEEEC------------
T ss_pred             ceEEEEEeccCCCHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCchhhEEEC------------
Confidence            99999999999999999987543345699999999999999999999999   999999999999999            


Q ss_pred             CCCCcccCCeEEeecCCccccccCCCCccccccccCCCcccceeccCCCCCccchHhHHHHHHHHHHhCccccccccCCC
Q 018699          197 RSGPWQDQGLCLVDWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQEKKPWKFQVDTYGLCAIVHMMLHNSYMEIEKKASP  276 (351)
Q Consensus       197 ~~~~~~~~~~~l~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~p~~~~~~~~  276 (351)
                           .++.++|+|||++...... .........||+.|+|||++.+..++.++|||||||++|+|++|..||.......
T Consensus       169 -----~~~~~kl~Dfg~~~~~~~~-~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~  242 (326)
T 3uim_A          169 -----EEFEAVVGDFGLAKLMDYK-DTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLAN  242 (326)
T ss_dssp             -----TTCCEEECCCSSCEECCSS-SSCEECCCCSCGGGCCHHHHHHSEECHHHHHHHHHHHHHHHHHCCCSBCHHHHTT
T ss_pred             -----CCCCEEeccCccccccCcc-cccccccccCCcCccCHHHhccCCCCccccchhHHHHHHHHHhCCCccccccccc
Confidence                 7788999999998754321 2223344568999999999988889999999999999999999999995321110


Q ss_pred             -------------------CCceeeecCcchhhhhHHHHHHHHHHHHhcCCCCCChHHHHHHHHHH
Q 018699          277 -------------------DGGLVYLPKLSFKRYWKVELWKSLFTNLLNMSSGNDKEVLQNLQKSF  323 (351)
Q Consensus       277 -------------------~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~~~~  323 (351)
                                         ............+.... +.+.+++.+||+.||.+|||+.+++++.-
T Consensus       243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~l~~li~~cl~~dP~~Rps~~ell~~L~  307 (326)
T 3uim_A          243 DDDVMLLDWVKGLLKEKKLEALVDVDLQGNYKDEEV-EQLIQVALLCTQSSPMERPKMSEVVRMLE  307 (326)
T ss_dssp             TSCSBHHHHHTTTTSSCCSTTSSCTTCTTSCCHHHH-HHHHHHHHHHTCSCGGGSCCHHHHHHHHH
T ss_pred             ccchhHHHHHHHHhhchhhhhhcChhhccccCHHHH-HHHHHHHHHHhCcCCccCCCHHHHHHHhc
Confidence                               00000111122233333 78999999999999999999999999854

>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A*

Probab=100.00  E-value=1.4e-42  Score=314.07  Aligned_cols=255  Identities=12%  Similarity=0.102  Sum_probs=189.5

Q ss_pred             EcCeeEEEEEEeeccCceEEEEEEecCCCCce----EEEEecCCCCCh-HHHHHHHHHhhhccccccccccceeeecccC
Q 018699           45 IGGKKYQIKGCAGQGGFAKVFKAYVNGDPEDV----VALKIQKPAFPW-EFYMYRQLDQRISGRERSSFGFAHRIHLYSD  119 (351)
Q Consensus        45 i~~~~Y~i~~~lg~G~~g~V~~a~~~~~~~~~----vaiK~~~~~~~~-e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  119 (351)
                      +..++|++.+.||+|+||+||+|.+ ..+++.    ||+|.+...... ....+......+....|++++.+..+.. ++
T Consensus        10 ~~~~~y~~~~~lG~G~~g~Vy~~~~-~~~~~~~~~kv~~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~   87 (325)
T 3kex_A           10 FKETELRKLKVLGSGVFGTVHKGVW-IPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVRLLGLCP-GS   87 (325)
T ss_dssp             CCTTTEEEEEEEECCSSCEEEEEEE-CCTTCSCCEEEEEEEECCTTSCSCBCSCCHHHHHHHTCCCTTBCCEEEEEC-BS
T ss_pred             cCHhHceeeeeeeecCCceEEEEEE-cCCCceEEEEEEEEeccccccHHHHHHHHHHHHHHhcCCCCCcCeEEEEEc-CC
Confidence            4567899999999999999999995 455554    788876433211 0001111111223346778888877665 56


Q ss_pred             eeEEEEEecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeeccCCCC
Q 018699          120 YSILVCDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSG  199 (351)
Q Consensus       120 ~~~lv~e~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~~~~  199 (351)
                      ..++||||+.+++|.+++...   +..+++..++.++.|++.||.|||++||+||||||+||+++               
T Consensus        88 ~~~~v~e~~~~~~L~~~l~~~---~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dikp~Nil~~---------------  149 (325)
T 3kex_A           88 SLQLVTQYLPLGSLLDHVRQH---RGALGPQLLLNWGVQIAKGMYYLEEHGMVHRNLAARNVLLK---------------  149 (325)
T ss_dssp             SEEEEEECCTTCBSHHHHHSS---GGGSCTTHHHHHHHHHHHHHHHHHHTTCCCSCCSSTTEEES---------------
T ss_pred             ccEEEEEeCCCCCHHHHHHHc---cccCCHHHHHHHHHHHHHHHHHHHhCCCCCCccchheEEEC---------------
Confidence            689999999999999998764   35789999999999999999999999999999999999998               


Q ss_pred             CcccCCeEEeecCCccccccCCCCccccccccCCCcccceeccCCCCCccchHhHHHHHHHHHHh-CccccccccCCCCC
Q 018699          200 PWQDQGLCLVDWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQEKKPWKFQVDTYGLCAIVHMMLH-NSYMEIEKKASPDG  278 (351)
Q Consensus       200 ~~~~~~~~l~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~-g~~p~~~~~~~~~~  278 (351)
                        .++.++|+|||++................++..|+|||++.+..++.++|||||||++|+|++ |..||.........
T Consensus       150 --~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~  227 (325)
T 3kex_A          150 --SPSQVQVADFGVADLLPPDDKQLLYSEAKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMTFGAEPYAGLRLAEVP  227 (325)
T ss_dssp             --SSSCEEECSCSGGGGSCCCTTCCC-----CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTSCTTHHH
T ss_pred             --CCCeEEECCCCcccccCcccccccccCCCCcccccChHHhccCCCChhhHhHHhHHHHHHHHhCCCCCccccCHHHHH
Confidence              678899999999976543333333445567889999999998889999999999999999999 99999764432110


Q ss_pred             cee-eecCcchhhhhHHHHHHHHHHHHhcCCCCCChHHHHHHHHH
Q 018699          279 GLV-YLPKLSFKRYWKVELWKSLFTNLLNMSSGNDKEVLQNLQKS  322 (351)
Q Consensus       279 ~~~-~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~~~  322 (351)
                      ... .......+..++ ..+.++|.+||..||.+||++.+++.+.
T Consensus       228 ~~~~~~~~~~~~~~~~-~~~~~li~~~l~~dp~~Rps~~el~~~l  271 (325)
T 3kex_A          228 DLLEKGERLAQPQICT-IDVYMVMVKCWMIDENIRPTFKELANEF  271 (325)
T ss_dssp             HHHHTTCBCCCCTTBC-TTTTHHHHHHTCSCTTTSCCHHHHHHHH
T ss_pred             HHHHcCCCCCCCCcCc-HHHHHHHHHHcCCChhhCcCHHHHHHHH
Confidence            000 011222222333 6788999999999999999999999873

>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis}

Probab=100.00  E-value=7.4e-42  Score=307.21  Aligned_cols=261  Identities=15%  Similarity=0.145  Sum_probs=191.0

Q ss_pred             CeeEEEEEEeeccCceEEEEEEecCCCCceEEEEecCCCCChHH---HHHHHHHhhhccccccccccceeeecccCeeEE
Q 018699           47 GKKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFPWEF---YMYRQLDQRISGRERSSFGFAHRIHLYSDYSIL  123 (351)
Q Consensus        47 ~~~Y~i~~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~~~e~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  123 (351)
                      .++|++.+.||+|+||+||+|. +..+++.||+|++......+.   ..+...........+++++.+..++..++..|+
T Consensus        33 ~~~y~~~~~lg~G~~g~Vy~~~-~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~l  111 (309)
T 2h34_A           33 FGPYRLRRLVGRGGMGDVYEAE-DTVRERIVALKLMSETLSSDPVFRTRMQREARTAGRLQEPHVVPIHDFGEIDGQLYV  111 (309)
T ss_dssp             -CCEEEEEEEEECSSSEEEEEE-ETTTTEEEEEEECGGGGGGSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEE
T ss_pred             eccEEEEEEEcCCCCeeEEEEE-EcCCCeEEEEEecCcccccCHHHHHHHHHHHHHHhhcCCCCeeEEEEEEeeCCeEEE
Confidence            4789999999999999999999 567789999999875533222   222223334455578888888888888899999


Q ss_pred             EEEecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeeccCCCCCccc
Q 018699          124 VCDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSGPWQD  203 (351)
Q Consensus       124 v~e~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~~~~~~~~  203 (351)
                      ||||+++++|.+++...    ..+++..++.++.|++.|+.|||++||+|+||+|+||+++                 .+
T Consensus       112 v~e~~~~~~L~~~l~~~----~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dlkp~NIl~~-----------------~~  170 (309)
T 2h34_A          112 DMRLINGVDLAAMLRRQ----GPLAPPRAVAIVRQIGSALDAAHAAGATHRDVKPENILVS-----------------AD  170 (309)
T ss_dssp             EEECCCCEEHHHHHHHH----CSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEC-----------------TT
T ss_pred             EEEecCCCCHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHHCcCCcCCCChHHEEEc-----------------CC
Confidence            99999999999999873    6799999999999999999999999999999999999999                 67


Q ss_pred             CCeEEeecCCccccccCCCCccccccccCCCcccceeccCCCCCccchHhHHHHHHHHHHhCccccccccCCCCCce---
Q 018699          204 QGLCLVDWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQEKKPWKFQVDTYGLCAIVHMMLHNSYMEIEKKASPDGGL---  280 (351)
Q Consensus       204 ~~~~l~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~p~~~~~~~~~~~~---  280 (351)
                      +.++|+|||++...... .........|++.|+|||.+.+..++.++||||||+++|+|++|..||...........   
T Consensus       171 ~~~kl~Dfg~~~~~~~~-~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~  249 (309)
T 2h34_A          171 DFAYLVDFGIASATTDE-KLTQLGNTVGTLYYMAPERFSESHATYRADIYALTCVLYECLTGSPPYQGDQLSVMGAHINQ  249 (309)
T ss_dssp             SCEEECSCCC-----------------CCGGGCCGGGTCC----CCCHHHHHHHHHHHHHHSSCSSCSCHHHHHHHHHHS
T ss_pred             CCEEEecCccCcccccc-ccccccccCCCcCccCHHHHcCCCCCchHhHHHHHHHHHHHHHCCCCCCCchHHHHHHHhcc
Confidence            78999999988643211 11223345689999999999988899999999999999999999999975432100000   


Q ss_pred             eeecCcchhhhhHHHHHHHHHHHHhcCCCCCChHHHHHHHHHHHHHHhhCh
Q 018699          281 VYLPKLSFKRYWKVELWKSLFTNLLNMSSGNDKEVLQNLQKSFQDYLCSNP  331 (351)
Q Consensus       281 ~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~~~~~~~~~~~~  331 (351)
                      ........+..++ +.+.++|.+||+.||++||++.+.+.+.++..+....
T Consensus       250 ~~~~~~~~~~~~~-~~l~~li~~~l~~dP~~Rp~s~~~l~~~l~~~l~~~~  299 (309)
T 2h34_A          250 AIPRPSTVRPGIP-VAFDAVIARGMAKNPEDRYVTCGDLSAAAHAALATAD  299 (309)
T ss_dssp             CCCCGGGTSTTCC-THHHHHHHHHTCSSGGGSCSSHHHHHHHHHHTCC---
T ss_pred             CCCCccccCCCCC-HHHHHHHHHhccCCHHHHHHhHHHHHHHHHHHHHhhc
Confidence            0011112222333 7899999999999999999666666677776655544

>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A

Probab=100.00  E-value=6.5e-42  Score=315.32  Aligned_cols=260  Identities=16%  Similarity=0.227  Sum_probs=192.1

Q ss_pred             EcCeeEEEEEEeeccCceEEEEEEecCCCCceEEEEecCCCCCh------HHHHHHHHHhhhc----cccccccccceee
Q 018699           45 IGGKKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFPW------EFYMYRQLDQRIS----GRERSSFGFAHRI  114 (351)
Q Consensus        45 i~~~~Y~i~~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~~~------e~~~~~~~~~~~~----~~~~~~~~~~~~~  114 (351)
                      +..++|++.+.||+|+||+||+|+ +..+++.||||++......      |...++.+.+...    ...+++++.+..+
T Consensus        16 ~~~~~y~~~~~lg~G~~g~V~~~~-~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~i~~~~~~   94 (373)
T 1q8y_A           16 YKDARYILVRKLGWGHFSTVWLAK-DMVNNTHVAMKIVRGDKVYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLDH   94 (373)
T ss_dssp             ETTTTEEEEEEEEECSSEEEEEEE-ETTTTEEEEEEEECSCHHHHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCCCEE
T ss_pred             ccCCeEEEEEeeeecCCeEEEEEE-ecCCCcEEEEEEecCCccchhhhhHHHHHHHHhhcccccchhccccchHHHHHHH
Confidence            467899999999999999999999 5678899999998754321      2233333332110    1124566666665


Q ss_pred             eccc----CeeEEEEEecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHC-CceecCCCCCcEEEeecCCc
Q 018699          115 HLYS----DYSILVCDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDV-GIIHGDFKPDNLLIRYARDE  189 (351)
Q Consensus       115 ~~~~----~~~~lv~e~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~-~i~H~dl~p~Nill~~~~~~  189 (351)
                      +...    ...++|||++ +++|.+++....  +..+++..++.++.||+.||.|||++ ||+|+||||+||+++.++..
T Consensus        95 ~~~~~~~~~~~~lv~e~~-~~~L~~~~~~~~--~~~~~~~~~~~i~~qi~~aL~~lH~~~~ivH~Dikp~NIll~~~~~~  171 (373)
T 1q8y_A           95 FNHKGPNGVHVVMVFEVL-GENLLALIKKYE--HRGIPLIYVKQISKQLLLGLDYMHRRCGIIHTDIKPENVLMEIVDSP  171 (373)
T ss_dssp             EEEEETTEEEEEEEECCC-CEEHHHHHHHTT--TSCCCHHHHHHHHHHHHHHHHHHHHTTCEECSCCSGGGEEEEEEETT
T ss_pred             hhccCCCCceEEEEEecC-CCCHHHHHHHhh--ccCCcHHHHHHHHHHHHHHHHHHHhcCCEEecCCChHHeEEeccCCC
Confidence            5433    3789999999 999999998743  35689999999999999999999998 99999999999999743311


Q ss_pred             ceeeccCCCCCcccCCeEEeecCCccccccCCCCccccccccCCCcccceeccCCCCCccchHhHHHHHHHHHHhCcccc
Q 018699          190 LTVLDHDRSGPWQDQGLCLVDWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQEKKPWKFQVDTYGLCAIVHMMLHNSYME  269 (351)
Q Consensus       190 ~~~~~~~~~~~~~~~~~~l~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~p~  269 (351)
                      .           ..+.++|+|||++....     .......||+.|+|||++.+..++.++|||||||++|+|++|..||
T Consensus       172 ~-----------~~~~~kl~Dfg~a~~~~-----~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf  235 (373)
T 1q8y_A          172 E-----------NLIQIKIADLGNACWYD-----EHYTNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLF  235 (373)
T ss_dssp             T-----------TEEEEEECCCTTCEETT-----BCCCSCCSCGGGCCHHHHHTCCCCTHHHHHHHHHHHHHHHHSSCCC
T ss_pred             c-----------CcceEEEcccccccccC-----CCCCCCCCCccccCcHHHhCCCCCchHhHHHHHHHHHHHHhCCCCC
Confidence            0           34569999999986543     1233457899999999999999999999999999999999999999


Q ss_pred             ccccCCCCCc-----------------------------------e-------------eeecCcchhhhhHHHHHHHHH
Q 018699          270 IEKKASPDGG-----------------------------------L-------------VYLPKLSFKRYWKVELWKSLF  301 (351)
Q Consensus       270 ~~~~~~~~~~-----------------------------------~-------------~~~~~~~~~~~~~~~~~~~li  301 (351)
                      ..........                                   .             .......++...+ +.+.+||
T Consensus       236 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~li  314 (373)
T 1q8y_A          236 EPDEGHSYTKDDDHIAQIIELLGELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEA-KEISDFL  314 (373)
T ss_dssp             ---------CHHHHHHHHHHHHCSCCHHHHHHCTTHHHHBCC--CBSSCCCCCBCCHHHHHHHTTCCCHHHH-HHHHHHH
T ss_pred             CCCcccccCChHHHHHHHHHhcCCCCHHHHhccchhhhhcCCcchhcccccccccchhhhhhhcccCCcchH-HHHHHHH
Confidence            7543210000                                   0             0000112223334 7899999


Q ss_pred             HHHhcCCCCCChHHHHHHHHHHHH
Q 018699          302 TNLLNMSSGNDKEVLQNLQKSFQD  325 (351)
Q Consensus       302 ~~~L~~dP~~R~s~~e~l~~~~~~  325 (351)
                      .+||+.||++|||+.|+|+|||..
T Consensus       315 ~~~L~~dP~~Rpt~~ell~hp~f~  338 (373)
T 1q8y_A          315 SPMLQLDPRKRADAGGLVNHPWLK  338 (373)
T ss_dssp             GGGGCSSTTTCBCHHHHHTCGGGT
T ss_pred             HHHhccCccccCCHHHHhhChhhh
Confidence            999999999999999999998743

>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B

Probab=100.00  E-value=2.7e-41  Score=305.53  Aligned_cols=255  Identities=18%  Similarity=0.181  Sum_probs=193.4

Q ss_pred             CeeEEEEEEeeccCceEEEEEEecCCCCceEEEEecCCCCC-----hHHHHHHHHHhhhccccccccccceeeec-----
Q 018699           47 GKKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFP-----WEFYMYRQLDQRISGRERSSFGFAHRIHL-----  116 (351)
Q Consensus        47 ~~~Y~i~~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~~-----~e~~~~~~~~~~~~~~~~~~~~~~~~~~~-----  116 (351)
                      .++|++.+.||+|+||+||+|++...+++.||+|++.....     ........+...+....|++++.+..++.     
T Consensus        10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~~   89 (326)
T 1blx_A           10 DQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTD   89 (326)
T ss_dssp             GGTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCTTSCBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEEEECS
T ss_pred             hhceeeeeeecccccEEEEEEEecCCCCEEEEEEEeccCcccccCCchhhHHHHHHHhhhccCCCCeEeeeeeeeecccC
Confidence            47899999999999999999995456789999998753211     11111112222233346778888777665     


Q ss_pred             ccCeeEEEEEecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeeccC
Q 018699          117 YSDYSILVCDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHD  196 (351)
Q Consensus       117 ~~~~~~lv~e~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~  196 (351)
                      .....++||||+. ++|.+++....  ...+++..++.++.|++.||.|||++||+|+||+|+||+++            
T Consensus        90 ~~~~~~lv~e~~~-~~L~~~l~~~~--~~~~~~~~~~~~~~qi~~~l~~lH~~gi~H~dlkp~Nili~------------  154 (326)
T 1blx_A           90 RETKLTLVFEHVD-QDLTTYLDKVP--EPGVPTETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNILVT------------  154 (326)
T ss_dssp             SEEEEEEEEECCS-CBHHHHHHHSC--TTCSCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEC------------
T ss_pred             CCceEEEEEecCC-CCHHHHHHhcc--cCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCHHHeEEc------------
Confidence            4567899999995 69999998742  23589999999999999999999999999999999999999            


Q ss_pred             CCCCcccCCeEEeecCCccccccCCCCccccccccCCCcccceeccCCCCCccchHhHHHHHHHHHHhCccccccccCCC
Q 018699          197 RSGPWQDQGLCLVDWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQEKKPWKFQVDTYGLCAIVHMMLHNSYMEIEKKASP  276 (351)
Q Consensus       197 ~~~~~~~~~~~l~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~p~~~~~~~~  276 (351)
                           .++.++|+|||++....   .........|++.|+|||++.+..++.++|||||||++|+|++|..||.......
T Consensus       155 -----~~~~~kl~Dfg~~~~~~---~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~  226 (326)
T 1blx_A          155 -----SSGQIKLADFGLARIYS---FQMALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVD  226 (326)
T ss_dssp             -----TTCCEEECSCCSCCCCC---GGGGGCCCCCCCTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHH
T ss_pred             -----CCCCEEEecCccccccc---CCCCccccccccceeCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCCCCCCHHH
Confidence                 77889999999986432   1223445678999999999998889999999999999999999999986432110


Q ss_pred             C-------------Cc-----------ee---eecCcchhhhhHHHHHHHHHHHHhcCCCCCChHHHHHHHHHHHH
Q 018699          277 D-------------GG-----------LV---YLPKLSFKRYWKVELWKSLFTNLLNMSSGNDKEVLQNLQKSFQD  325 (351)
Q Consensus       277 ~-------------~~-----------~~---~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~~~~~~  325 (351)
                      .             ..           +.   ..+........+ +.+++||.+||..||.+||++.|++.|+|..
T Consensus       227 ~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~li~~~L~~dP~~Rpt~~e~l~hp~~~  301 (326)
T 1blx_A          227 QLGKILDVIGLPGEEDWPRDVALPRQAFHSKSAQPIEKFVTDID-ELGKDLLLKCLTFNPAKRISAYSALSHPYFQ  301 (326)
T ss_dssp             HHHHHHHHHCCCCGGGSCTTCSSCGGGSCCCCCCCGGGTCCSCC-HHHHHHHHHHSCSSTTTSCCHHHHHTSGGGT
T ss_pred             HHHHHHHHcCCCCcccCccccccchhhhcccCcchhhhccccCC-HHHHHHHHHHcCCCcccCCCHHHHhcCcccc
Confidence            0             00           00   000011112233 7889999999999999999999999998743

>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*

Probab=100.00  E-value=1.2e-41  Score=304.42  Aligned_cols=249  Identities=15%  Similarity=0.190  Sum_probs=186.5

Q ss_pred             cCeeEEEEEEeeccCceEEEEEEecCCCCceEEEEecCCCCChHHHHHHHHHhhhccccccccccceeeec----ccCee
Q 018699           46 GGKKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFPWEFYMYRQLDQRISGRERSSFGFAHRIHL----YSDYS  121 (351)
Q Consensus        46 ~~~~Y~i~~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~  121 (351)
                      ..++|++.+.||+|+||+||+|++   +++.||||++............++... ....|++++.+.....    .....
T Consensus         6 ~~~~y~~~~~lg~G~~g~V~~~~~---~~~~vavK~~~~~~~~~~~~e~~~~~~-~~l~h~niv~~~~~~~~~~~~~~~~   81 (301)
T 3q4u_A            6 VARDITLLECVGKGRYGEVWRGSW---QGENVAVKIFSSRDEKSWFRETELYNT-VMLRHENILGFIASDMTSRHSSTQL   81 (301)
T ss_dssp             CGGGCEEEEEEEECSSEEEEEEEE---TTEEEEEEEECGGGHHHHHHHHHHHHH-TCCCCTTBCCEEEEEEEEETTEEEE
T ss_pred             ccCcEEEEEeeccCCCcEEEEEEE---CCEEEEEEEeccccchhhHHHHHHHHH-hhccCcCeeeEEEeeccccCCCcee
Confidence            467999999999999999999984   478999999876433222222222222 2256778877766533    24568


Q ss_pred             EEEEEecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHH--------HCCceecCCCCCcEEEeecCCcceee
Q 018699          122 ILVCDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLH--------DVGIIHGDFKPDNLLIRYARDELTVL  193 (351)
Q Consensus       122 ~lv~e~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH--------~~~i~H~dl~p~Nill~~~~~~~~~~  193 (351)
                      ++||||+++++|.+++..     ..+++..++.++.|++.||.|||        ++||+||||||+||+++         
T Consensus        82 ~lv~e~~~~g~L~~~l~~-----~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dlkp~Nill~---------  147 (301)
T 3q4u_A           82 WLITHYHEMGSLYDYLQL-----TTLDTVSCLRIVLSIASGLAHLHIEIFGTQGKPAIAHRDLKSKNILVK---------  147 (301)
T ss_dssp             EEEECCCTTCBHHHHHTT-----CCBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCEEECSCCCGGGEEEC---------
T ss_pred             EEehhhccCCCHHHHHhh-----cccCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCeecCCCChHhEEEc---------
Confidence            999999999999999954     57999999999999999999999        99999999999999999         


Q ss_pred             ccCCCCCcccCCeEEeecCCccccccCCCCc--cccccccCCCcccceeccCC------CCCccchHhHHHHHHHHHHhC
Q 018699          194 DHDRSGPWQDQGLCLVDWGRGIDLHLFPDNM--EFEGDCRTSGFRCIEMQEKK------PWKFQVDTYGLCAIVHMMLHN  265 (351)
Q Consensus       194 ~~~~~~~~~~~~~~l~Dfg~a~~~~~~~~~~--~~~~~~g~~~y~aPE~~~~~------~~~~~~DiwslG~il~~l~~g  265 (351)
                              .++.+||+|||++..........  ......||+.|+|||++.+.      .++.++|||||||++|+|++|
T Consensus       148 --------~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DvwslG~il~el~tg  219 (301)
T 3q4u_A          148 --------KNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARR  219 (301)
T ss_dssp             --------TTSCEEECCCTTCEEEETTTTEEECCCCCCCCCGGGCCHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             --------CCCCEEEeeCCCeeecccccccccccccccccccceeChhhhcCcCCCCcccCCchhhHHHHHHHHHHHHhh
Confidence                    77889999999986533221111  12334789999999999776      445799999999999999999


Q ss_pred             ----------ccccccccCCCC------------CceeeecCcchhhhhHHHHHHHHHHHHhcCCCCCChHHHHHHHH
Q 018699          266 ----------SYMEIEKKASPD------------GGLVYLPKLSFKRYWKVELWKSLFTNLLNMSSGNDKEVLQNLQK  321 (351)
Q Consensus       266 ----------~~p~~~~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~~  321 (351)
                                ..||........            ......+....+...+ +.+.+||.+||+.||++|||+.++++.
T Consensus       220 ~~~~~~~~~~~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~l~~li~~cl~~dP~~Rps~~~i~~~  296 (301)
T 3q4u_A          220 MVSNGIVEDYKPPFYDVVPNDPSFEDMRKVVCVDQQRPNIPNRWFSDPTL-TSLAKLMKECWYQNPSARLTALRIKKT  296 (301)
T ss_dssp             BCBTTBCCCCCCTTTTTSCSSCCHHHHHHHHTTSCCCCCCCGGGGGSHHH-HHHHHHHHHHCCSSGGGSCCHHHHHHH
T ss_pred             hcCccccccccccccccCCCCcchhhhhHHHhccCCCCCCChhhccCccH-HHHHHHHHHHhhcChhhCCCHHHHHHH
Confidence                      777754332211            0000011111222233 789999999999999999999999875

>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7

Probab=100.00  E-value=1e-41  Score=311.08  Aligned_cols=252  Identities=20%  Similarity=0.240  Sum_probs=188.3

Q ss_pred             CeeEEEEEEeeccCceEEEEEEecCCCCceEEEEecCCCCChH------HHHHHHHHhhhccccccccccceeeecccCe
Q 018699           47 GKKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFPWE------FYMYRQLDQRISGRERSSFGFAHRIHLYSDY  120 (351)
Q Consensus        47 ~~~Y~i~~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~~~e------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  120 (351)
                      .++|++.+.||+|+||+||+|. +..+|+.||+|++......+      ....+++ .......|++++.+..++...+.
T Consensus         9 ~~~y~~~~~lg~G~~g~Vy~~~-~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~-~~l~~l~h~~iv~~~~~~~~~~~   86 (346)
T 1ua2_A            9 AKRYEKLDFLGEGQFATVYKAR-DKNTNQIVAIKKIKLGHRSEAKDGINRTALREI-KLLQELSHPNIIGLLDAFGHKSN   86 (346)
T ss_dssp             ----CEEEEEEEETTEEEEEEE-CSSCCSEEEEEEC------------CTHHHHHH-HHHHHCCCTTBCCEEEEECCTTC
T ss_pred             hcccEEEeEEeecCCEEEEEEE-ECCCCcEEEEEEEecCCcchhhhhhhHHHHHHH-HHHhhCCCCCCCeEEEEEeeCCc
Confidence            5789999999999999999999 56788999999987532211      1111222 22334468888888888888889


Q ss_pred             eEEEEEecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeeccCCCCC
Q 018699          121 SILVCDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSGP  200 (351)
Q Consensus       121 ~~lv~e~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~~~~~  200 (351)
                      .++||||+++ +|.+++...   +..+++..++.++.|++.||.|||++||+||||||+||+++                
T Consensus        87 ~~lv~e~~~~-~l~~~~~~~---~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~----------------  146 (346)
T 1ua2_A           87 ISLVFDFMET-DLEVIIKDN---SLVLTPSHIKAYMLMTLQGLEYLHQHWILHRDLKPNNLLLD----------------  146 (346)
T ss_dssp             CEEEEECCSE-EHHHHHTTC---CSSCCSSHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEC----------------
T ss_pred             eEEEEEcCCC-CHHHHHHhc---CcCCCHHHHHHHHHHHHHHHHHHHHCCEECCCCCHHHEEEc----------------
Confidence            9999999965 898888653   45789999999999999999999999999999999999999                


Q ss_pred             cccCCeEEeecCCccccccCCCCccccccccCCCcccceeccC-CCCCccchHhHHHHHHHHHHhCccccccccCCC---
Q 018699          201 WQDQGLCLVDWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQEK-KPWKFQVDTYGLCAIVHMMLHNSYMEIEKKASP---  276 (351)
Q Consensus       201 ~~~~~~~l~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~~DiwslG~il~~l~~g~~p~~~~~~~~---  276 (351)
                       .++.++|+|||++.....  .........+|+.|+|||++.+ ..++.++|||||||++|+|++|.+||.......   
T Consensus       147 -~~~~~kl~Dfg~a~~~~~--~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~~~~~~~~~~~~~  223 (346)
T 1ua2_A          147 -ENGVLKLADFGLAKSFGS--PNRAYTHQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLDQLT  223 (346)
T ss_dssp             -TTCCEEECCCGGGSTTTS--CCCCCCCSCCCCTTCCHHHHTTCSCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHH
T ss_pred             -CCCCEEEEecccceeccC--CcccCCcccccccccCchHhhCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCCHHHHHH
Confidence             778899999999865431  2233445678999999999865 457899999999999999999999886432110   


Q ss_pred             ----------CCce----------ee--ecCcchh---hhhHHHHHHHHHHHHhcCCCCCChHHHHHHHHHHH
Q 018699          277 ----------DGGL----------VY--LPKLSFK---RYWKVELWKSLFTNLLNMSSGNDKEVLQNLQKSFQ  324 (351)
Q Consensus       277 ----------~~~~----------~~--~~~~~~~---~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~~~~~  324 (351)
                                ...+          ..  .+..+..   ...+ +.+.+||.+||..||++|||+.|+|+|+|.
T Consensus       224 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~li~~~L~~dP~~Rpt~~ell~h~~f  295 (346)
T 1ua2_A          224 RIFETLGTPTEEQWPDMCSLPDYVTFKSFPGIPLHHIFSAAG-DDLLDLIQGLFLFNPCARITATQALKMKYF  295 (346)
T ss_dssp             HHHHHHCCCCTTTSSSTTSSTTCCCCCCCCCCCHHHHCTTCC-HHHHHHHHHHHCSSTTTSCCHHHHHTSGGG
T ss_pred             HHHHHcCCCChhhhhhhccCcccccccccCCCChHHhhccCC-HHHHHHHHHHhccChhhCCCHHHHhcChhh
Confidence                      0000          00  0011111   1223 789999999999999999999999999874

>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A*

Probab=100.00  E-value=4.7e-42  Score=310.89  Aligned_cols=257  Identities=14%  Similarity=0.094  Sum_probs=199.1

Q ss_pred             EEcCeeEEEEEEeeccCceEEEEEEe---cCCCCceEEEEecCCCCChHHHHHHHHHhhhccccccccccceeeec--cc
Q 018699           44 EIGGKKYQIKGCAGQGGFAKVFKAYV---NGDPEDVVALKIQKPAFPWEFYMYRQLDQRISGRERSSFGFAHRIHL--YS  118 (351)
Q Consensus        44 ~i~~~~Y~i~~~lg~G~~g~V~~a~~---~~~~~~~vaiK~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~  118 (351)
                      .+..++|++.+.||+|+||+||+|++   +..+++.||+|++..........+......+....+++++.+..+..  ..
T Consensus        19 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~   98 (327)
T 3lxl_A           19 IFEERHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGR   98 (327)
T ss_dssp             BCCGGGEEEEEEEEEETTEEEEEEEECTTSSSCSEEEEEEEESSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSS
T ss_pred             hhchhhhhhhhhccCCCCeEEEEEEeccCCCCcceEEEEEEeccCCHHHHHHHHHHHHHHHhcCCCceeEEEEEEecCCC
Confidence            35678999999999999999999985   35678999999988765443333333334445557788888777654  45


Q ss_pred             CeeEEEEEecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeeccCCC
Q 018699          119 DYSILVCDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRS  198 (351)
Q Consensus       119 ~~~~lv~e~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~~~  198 (351)
                      +..++||||+++++|.+++...   +..+++..++.++.|++.||+|||++||+|+||||+||+++              
T Consensus        99 ~~~~lv~e~~~~~~L~~~l~~~---~~~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dikp~NIl~~--------------  161 (327)
T 3lxl_A           99 QSLRLVMEYLPSGCLRDFLQRH---RARLDASRLLLYSSQICKGMEYLGSRRCVHRDLAARNILVE--------------  161 (327)
T ss_dssp             CEEEEEEECCTTCBHHHHHHHH---GGGCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEE--------------
T ss_pred             ceEEEEEeecCCCCHHHHHHhc---ccCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCChhhEEEC--------------
Confidence            6789999999999999999875   35689999999999999999999999999999999999999              


Q ss_pred             CCcccCCeEEeecCCccccccCCCC-ccccccccCCCcccceeccCCCCCccchHhHHHHHHHHHHhCccccccccCCC-
Q 018699          199 GPWQDQGLCLVDWGRGIDLHLFPDN-MEFEGDCRTSGFRCIEMQEKKPWKFQVDTYGLCAIVHMMLHNSYMEIEKKASP-  276 (351)
Q Consensus       199 ~~~~~~~~~l~Dfg~a~~~~~~~~~-~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~p~~~~~~~~-  276 (351)
                         .++.++|+|||++......... .......+++.|+|||++.+..++.++|||||||++|+|++|..||....... 
T Consensus       162 ---~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~  238 (327)
T 3lxl_A          162 ---SEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFTYCDKSCSPSAEFL  238 (327)
T ss_dssp             ---ETTEEEECCGGGCEECCTTCSEEECSSCCCSCGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHH
T ss_pred             ---CCCCEEEcccccceecccCCccceeeccCCccccccCHHHhccCCCChHHhHHHHHHHHHHHHhCCCCCccccchhh
Confidence               6778999999998754322111 11233457888999999988888999999999999999999999986443210 


Q ss_pred             -----CCce----------eeecCcchhhhhHHHHHHHHHHHHhcCCCCCChHHHHHHHH
Q 018699          277 -----DGGL----------VYLPKLSFKRYWKVELWKSLFTNLLNMSSGNDKEVLQNLQK  321 (351)
Q Consensus       277 -----~~~~----------~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~~  321 (351)
                           ....          ......+.+..++ +.+.+||.+||++||.+||++.+++.+
T Consensus       239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~l~~li~~~l~~dP~~Rps~~ell~~  297 (327)
T 3lxl_A          239 RMMGCERDVPALSRLLELLEEGQRLPAPPACP-AEVHELMKLCWAPSPQDRPSFSALGPQ  297 (327)
T ss_dssp             HHCC----CCHHHHHHHHHHTTCCCCCCTTCC-HHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             hhcccccccccHHHHHHHhhcccCCCCCCccc-HHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence                 0000          0011122233344 789999999999999999999999876

>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ...

Probab=100.00  E-value=5.7e-42  Score=304.58  Aligned_cols=256  Identities=12%  Similarity=0.089  Sum_probs=200.7

Q ss_pred             EEEcCeeEEEEEEeeccCceEEEEEEecCCCCceEEEEecCCCCChHHHHHHHHHhhhccccccccccceeeecccCeeE
Q 018699           43 IEIGGKKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFPWEFYMYRQLDQRISGRERSSFGFAHRIHLYSDYSI  122 (351)
Q Consensus        43 ~~i~~~~Y~i~~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  122 (351)
                      +++..++|++.+.||+|+||+||+|. +..+++.||+|++...........++ ........|++++.+..+...++..+
T Consensus         8 ~~~~~~~~~~~~~lg~G~~g~V~~~~-~~~~~~~vaiK~~~~~~~~~~~~~~E-~~~l~~l~h~~i~~~~~~~~~~~~~~   85 (288)
T 3kfa_A            8 WEMERTDITMKHKLGGGQYGEVYEGV-WKKYSLTVAVKTLKEDTMEVEEFLKE-AAVMKEIKHPNLVQLLGVCTREPPFY   85 (288)
T ss_dssp             TBCCGGGEEEEEESGGGTTCSEEEEE-EGGGTEEEEEEEECSCSTHHHHHHHH-HHHHHHCCCTTBCCEEEEECSSSSEE
T ss_pred             ccccccceeEEeecCCCCceeEEEeE-ecCCCEEEEEEecCcCHHHHHHHHHH-HHHHHhCCCCCEeeEEEEEccCCCEE
Confidence            34567899999999999999999999 46778999999988665433333332 23334456888988888888888999


Q ss_pred             EEEEecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeeccCCCCCcc
Q 018699          123 LVCDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSGPWQ  202 (351)
Q Consensus       123 lv~e~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~~~~~~~  202 (351)
                      +||||+++++|.+++....  ...+++..++.++.|++.||.|||++||+|+||+|+||+++                 .
T Consensus        86 ~v~e~~~~~~L~~~~~~~~--~~~~~~~~~~~i~~~i~~~l~~lH~~~i~H~dikp~Nil~~-----------------~  146 (288)
T 3kfa_A           86 IITEFMTYGNLLDYLRECN--RQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVG-----------------E  146 (288)
T ss_dssp             EEEECCTTEEHHHHHHHCC--TTTSCHHHHHHHHHHHHHHHHHHHHHTCCCSCCSGGGEEEC-----------------G
T ss_pred             EEEEcCCCCcHHHHHHhcc--cCCccHhHHHHHHHHHHHHHHHHHHCCccCCCCCcceEEEc-----------------C
Confidence            9999999999999998642  35689999999999999999999999999999999999998                 7


Q ss_pred             cCCeEEeecCCccccccCCCCccccccccCCCcccceeccCCCCCccchHhHHHHHHHHHHh-CccccccccCCCCCce-
Q 018699          203 DQGLCLVDWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQEKKPWKFQVDTYGLCAIVHMMLH-NSYMEIEKKASPDGGL-  280 (351)
Q Consensus       203 ~~~~~l~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~-g~~p~~~~~~~~~~~~-  280 (351)
                      ++.++|+|||++...... .........+++.|+|||.+.+..++.++||||||+++|+|++ |..||........... 
T Consensus       147 ~~~~~l~Dfg~~~~~~~~-~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~~g~~p~~~~~~~~~~~~~  225 (288)
T 3kfa_A          147 NHLVKVADFGLSRLMTGD-TYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELL  225 (288)
T ss_dssp             GGCEEECCCCGGGTSCSS-SSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGHHHHH
T ss_pred             CCCEEEccCccceeccCC-ccccccCCccccCcCChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHH
Confidence            788999999998654321 1222334456788999999998889999999999999999999 8888865432210000 


Q ss_pred             eeecCcchhhhhHHHHHHHHHHHHhcCCCCCChHHHHHHHH
Q 018699          281 VYLPKLSFKRYWKVELWKSLFTNLLNMSSGNDKEVLQNLQK  321 (351)
Q Consensus       281 ~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~~  321 (351)
                      ........+..++ +.+.+||.+||..||.+||++.++++.
T Consensus       226 ~~~~~~~~~~~~~-~~l~~li~~~l~~dp~~Rps~~~~~~~  265 (288)
T 3kfa_A          226 EKDYRMERPEGCP-EKVYELMRACWQWNPSDRPSFAEIHQA  265 (288)
T ss_dssp             HTTCCCCCCTTCC-HHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             hccCCCCCCCCCC-HHHHHHHHHHhCCChhhCcCHHHHHHH
Confidence            0011122233344 789999999999999999999998764

>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0

Probab=100.00  E-value=1.2e-41  Score=299.75  Aligned_cols=256  Identities=18%  Similarity=0.201  Sum_probs=187.0

Q ss_pred             EEcCeeEEEEEEeeccCceEEEEEEecCCCCceEEEEecCCCCChH----HHHHHHHHhhhccccccccccceeeecccC
Q 018699           44 EIGGKKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFPWE----FYMYRQLDQRISGRERSSFGFAHRIHLYSD  119 (351)
Q Consensus        44 ~i~~~~Y~i~~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~~~e----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  119 (351)
                      ++..++|++.+.||+|+||+||+|.+   .++.||+|++.......    ...+...........|++++.+..++..++
T Consensus         3 ~~~~~~~~~~~~lg~G~~g~V~~~~~---~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~   79 (271)
T 3dtc_A            3 EIDFAELTLEEIIGIGGFGKVYRAFW---IGDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALRGVCLKEP   79 (271)
T ss_dssp             BCCTTSEEEEEEEEEETTEEEEEEEE---TTEEEEEEEC----------CHHHHHHHHHHHHHCCCTTBCCEEEEECCC-
T ss_pred             ccchhheeeeeeeccCCCeEEEEEEE---cCCeEEEEEEecCCcccHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEecCC
Confidence            35568999999999999999999995   27889999987543221    122222333344556889999888888888


Q ss_pred             eeEEEEEecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCC---ceecCCCCCcEEEeecCCcceeeccC
Q 018699          120 YSILVCDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVG---IIHGDFKPDNLLIRYARDELTVLDHD  196 (351)
Q Consensus       120 ~~~lv~e~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~---i~H~dl~p~Nill~~~~~~~~~~~~~  196 (351)
                      ..++||||+++++|.+++..     ..+++..++.++.|++.|+.|||++|   |+|+||||+||+++.....       
T Consensus        80 ~~~lv~e~~~~~~L~~~~~~-----~~~~~~~~~~i~~~l~~~l~~lH~~~~~~i~H~dikp~Nil~~~~~~~-------  147 (271)
T 3dtc_A           80 NLCLVMEFARGGPLNRVLSG-----KRIPPDILVNWAVQIARGMNYLHDEAIVPIIHRDLKSSNILILQKVEN-------  147 (271)
T ss_dssp             -CEEEEECCTTEEHHHHHTS-----SCCCHHHHHHHHHHHHHHHHHHHHSSSSCCCCSCCSGGGEEESSCCSS-------
T ss_pred             ceEEEEEcCCCCCHHHHhhc-----CCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCchHHEEEeccccc-------
Confidence            99999999999999998853     67999999999999999999999999   8999999999999843211       


Q ss_pred             CCCCcccCCeEEeecCCccccccCCCCccccccccCCCcccceeccCCCCCccchHhHHHHHHHHHHhCccccccccCCC
Q 018699          197 RSGPWQDQGLCLVDWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQEKKPWKFQVDTYGLCAIVHMMLHNSYMEIEKKASP  276 (351)
Q Consensus       197 ~~~~~~~~~~~l~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~p~~~~~~~~  276 (351)
                        ....++.++|+|||++.....    .......|++.|+|||.+.+..++.++||||||+++|+|++|..||.......
T Consensus       148 --~~~~~~~~kl~Dfg~~~~~~~----~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~  221 (271)
T 3dtc_A          148 --GDLSNKILKITDFGLAREWHR----TTKMSAAGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVPFRGIDGLA  221 (271)
T ss_dssp             --SCCSSCCEEECCCCC-----------------CCGGGSCHHHHHHCCCSHHHHHHHHHHHHHHHHHCCCTTTTSCHHH
T ss_pred             --ccccCcceEEccCCccccccc----ccccCCCCccceeCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH
Confidence              011367799999999864331    22234568999999999998889999999999999999999999997543210


Q ss_pred             CCc--eeeecCcchhhhhHHHHHHHHHHHHhcCCCCCChHHHHHHHH
Q 018699          277 DGG--LVYLPKLSFKRYWKVELWKSLFTNLLNMSSGNDKEVLQNLQK  321 (351)
Q Consensus       277 ~~~--~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~~  321 (351)
                      ...  .......+.+...+ +.+.++|.+||+.||.+||++.|++++
T Consensus       222 ~~~~~~~~~~~~~~~~~~~-~~~~~li~~~l~~~p~~Rps~~e~l~~  267 (271)
T 3dtc_A          222 VAYGVAMNKLALPIPSTCP-EPFAKLMEDCWNPDPHSRPSFTNILDQ  267 (271)
T ss_dssp             HHHHHHTSCCCCCCCTTCC-HHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             HHHhhhcCCCCCCCCcccC-HHHHHHHHHHhcCCcccCcCHHHHHHH
Confidence            000  00011122333344 789999999999999999999999886

>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ...

Probab=100.00  E-value=5.6e-42  Score=310.46  Aligned_cols=255  Identities=14%  Similarity=0.119  Sum_probs=187.5

Q ss_pred             EEcCeeEEEEEEeeccCceEEEEEEecCCCCce----EEEEecCCCCCh-HHHHHHHHHhhhccccccccccceeeeccc
Q 018699           44 EIGGKKYQIKGCAGQGGFAKVFKAYVNGDPEDV----VALKIQKPAFPW-EFYMYRQLDQRISGRERSSFGFAHRIHLYS  118 (351)
Q Consensus        44 ~i~~~~Y~i~~~lg~G~~g~V~~a~~~~~~~~~----vaiK~~~~~~~~-e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  118 (351)
                      .+..++|++.+.||+|+||+||+|++ ..+++.    ||+|.+...... ....+...........|++++.+..++..+
T Consensus        11 ~l~~~~y~~~~~lG~G~~g~Vy~~~~-~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~   89 (327)
T 3poz_A           11 ILKETEFKKIKVLGSGAFGTVYKGLW-IPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTS   89 (327)
T ss_dssp             ECCGGGEEEEEEEEEETTEEEEEEEE-CC----CCEEEEEEEC-------CHHHHHHHHHHHHHCCBTTBCCEEEEEESS
T ss_pred             hcCHHHcccceEEeeCCCeEEEEEEE-cCCCceEEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecC
Confidence            35578999999999999999999995 444443    588887543221 111222222333445678888888877654


Q ss_pred             CeeEEEEEecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeeccCCC
Q 018699          119 DYSILVCDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRS  198 (351)
Q Consensus       119 ~~~~lv~e~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~~~  198 (351)
                      . .++|+||+.+++|.+++...   +..+++..++.++.|++.||.|||++||+||||||+||+++              
T Consensus        90 ~-~~~v~e~~~~g~L~~~l~~~---~~~~~~~~~~~~~~qi~~~l~~LH~~~ivH~Dikp~NIll~--------------  151 (327)
T 3poz_A           90 T-VQLITQLMPFGCLLDYVREH---KDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVK--------------  151 (327)
T ss_dssp             S-EEEEEECCTTCBHHHHHHHS---TTSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEE--------------
T ss_pred             C-eEEEEEecCCCcHHHHHHhc---CCCCCHHHHHHHHHHHHHHHHHHhhCCeeCCCCChheEEEC--------------
Confidence            4 68899999999999999874   46799999999999999999999999999999999999999              


Q ss_pred             CCcccCCeEEeecCCccccccCCCCccccccccCCCcccceeccCCCCCccchHhHHHHHHHHHHh-CccccccccCCCC
Q 018699          199 GPWQDQGLCLVDWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQEKKPWKFQVDTYGLCAIVHMMLH-NSYMEIEKKASPD  277 (351)
Q Consensus       199 ~~~~~~~~~l~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~-g~~p~~~~~~~~~  277 (351)
                         .++.++|+|||++................+|+.|+|||.+.+..++.++|||||||++|+|++ |..||........
T Consensus       152 ---~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~  228 (327)
T 3poz_A          152 ---TPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEI  228 (327)
T ss_dssp             ---ETTEEEECCTTHHHHHTTTCC-------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGH
T ss_pred             ---CCCCEEEccCcceeEccCCcccccccCCCccccccChHHhccCCCCchhhhhhhHHHHHHHHhcCCCCccCCCHHHH
Confidence               677799999999875443322223334456889999999999999999999999999999999 9999975433211


Q ss_pred             Ccee-eecCcchhhhhHHHHHHHHHHHHhcCCCCCChHHHHHHHH
Q 018699          278 GGLV-YLPKLSFKRYWKVELWKSLFTNLLNMSSGNDKEVLQNLQK  321 (351)
Q Consensus       278 ~~~~-~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~~  321 (351)
                      .... .....+.+..++ ..+.++|.+||..||.+||++.+++.+
T Consensus       229 ~~~~~~~~~~~~~~~~~-~~~~~li~~~l~~~p~~Rps~~ell~~  272 (327)
T 3poz_A          229 SSILEKGERLPQPPICT-IDVYMIMVKCWMIDADSRPKFRELIIE  272 (327)
T ss_dssp             HHHHHTTCCCCCCTTBC-HHHHHHHHHHTCSCGGGSCCHHHHHHH
T ss_pred             HHHHHcCCCCCCCccCC-HHHHHHHHHHcCCChhhCCCHHHHHHH
Confidence            0000 011122233344 789999999999999999999999986

>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A

Probab=100.00  E-value=1.8e-41  Score=311.67  Aligned_cols=256  Identities=16%  Similarity=0.142  Sum_probs=191.6

Q ss_pred             EcCeeEEEEEEeeccCceEEEEEEecCC----CCceEEEEecCCCCCh---HHHHHHHHHh--------hhccccccccc
Q 018699           45 IGGKKYQIKGCAGQGGFAKVFKAYVNGD----PEDVVALKIQKPAFPW---EFYMYRQLDQ--------RISGRERSSFG  109 (351)
Q Consensus        45 i~~~~Y~i~~~lg~G~~g~V~~a~~~~~----~~~~vaiK~~~~~~~~---e~~~~~~~~~--------~~~~~~~~~~~  109 (351)
                      +..++|++.+.||+|+||+||+|.+...    .++.||||++......   |...+..+.+        ......|++++
T Consensus        32 ~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~~iv  111 (364)
T 3op5_A           32 MAAAAWKVGLPIGQGGFGCIYLADMNSSESVGSDAPCVVKVEPSDNGPLFTELKFYQRAAKPEQIQKWIRTRKLKYLGVP  111 (364)
T ss_dssp             TTCCEEEEEEECCCC-CCEEEEEEECCSSCCCTTCSEEEEEEETTCHHHHHHHHHHHHHCCHHHHHHHHHHTTCSCCCSC
T ss_pred             cCCCeEEEEEEEecCCCeEEEEeeecCccccccccceEEEEeeccchhHHHHHHHHHhhhhhHHHHHHHHHhhccCCCCC
Confidence            5678999999999999999999996332    3689999998765422   2333333322        22345678888


Q ss_pred             cceeeeccc----CeeEEEEEecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEee
Q 018699          110 FAHRIHLYS----DYSILVCDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRY  185 (351)
Q Consensus       110 ~~~~~~~~~----~~~~lv~e~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~  185 (351)
                      .+..+....    ...|+||||+ +++|.+++...   +..+++..++.++.||+.||.|||++||+||||||+||+++.
T Consensus       112 ~~~~~~~~~~~~~~~~~lv~e~~-g~~L~~~~~~~---~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~Nill~~  187 (364)
T 3op5_A          112 KYWGSGLHDKNGKSYRFMIMDRF-GSDLQKIYEAN---AKRFSRKTVLQLSLRILDILEYIHEHEYVHGDIKASNLLLNY  187 (364)
T ss_dssp             CEEEEEEEEETTEEEEEEEEECE-EEEHHHHHHHT---TSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEES
T ss_pred             eEEeeeeeccCCcceEEEEEeCC-CCCHHHHHHhc---cCCCCHHHHHHHHHHHHHHHHHHHHCCeEEecCCHHHEEEec
Confidence            877766543    5689999999 99999999874   468999999999999999999999999999999999999983


Q ss_pred             cCCcceeeccCCCCCcccCCeEEeecCCccccccCCCC-----ccccccccCCCcccceeccCCCCCccchHhHHHHHHH
Q 018699          186 ARDELTVLDHDRSGPWQDQGLCLVDWGRGIDLHLFPDN-----MEFEGDCRTSGFRCIEMQEKKPWKFQVDTYGLCAIVH  260 (351)
Q Consensus       186 ~~~~~~~~~~~~~~~~~~~~~~l~Dfg~a~~~~~~~~~-----~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~  260 (351)
                      +               .++.++|+|||++.........     .......||+.|+|||++.+..++.++|||||||++|
T Consensus       188 ~---------------~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~  252 (364)
T 3op5_A          188 K---------------NPDQVYLVDYGLAYRYCPEGVHKAYAADPKRCHDGTIEFTSIDAHNGVAPSRRGDLEILGYCMI  252 (364)
T ss_dssp             S---------------CTTCEEECCCTTCEESSGGGCCCCSSCCSSCCCCCCTTTCCHHHHTTCCCCHHHHHHHHHHHHH
T ss_pred             C---------------CCCeEEEEECCcceecccCCcccccccCcccccCCCCCccCHHHhCCCCCCchhhHHHHHHHHH
Confidence            2               3467999999999654322111     1123445999999999999999999999999999999


Q ss_pred             HHHhCccccccccCCCCCce--eeecCcchh---------hhhHHHHHHHHHHHHhcCCCCCChHHHHHHH
Q 018699          261 MMLHNSYMEIEKKASPDGGL--VYLPKLSFK---------RYWKVELWKSLFTNLLNMSSGNDKEVLQNLQ  320 (351)
Q Consensus       261 ~l~~g~~p~~~~~~~~~~~~--~~~~~~~~~---------~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~  320 (351)
                      +|++|..||...........  ........+         ...+ +.+.+||..||..||.+||++.+++.
T Consensus       253 el~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~li~~cl~~~p~~RP~~~~l~~  322 (364)
T 3op5_A          253 QWLTGHLPWEDNLKDPKYVRDSKIRYRENIASLMDKCFPAANAP-GEIAKYMETVKLLDYTEKPLYENLRD  322 (364)
T ss_dssp             HHHHSCCTTGGGTTCHHHHHHHHHHHHHCHHHHHHHHSCTTCCC-HHHHHHHHHHHTCCTTCCCCHHHHHH
T ss_pred             HHHhCCCCccccccCHHHHHHHHHHhhhhHHHHHHHhcccccCH-HHHHHHHHHHhcCCCCCCCCHHHHHH
Confidence            99999999986433211000  000000111         1113 78899999999999999999988875

>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ...

Probab=100.00  E-value=3.2e-41  Score=315.49  Aligned_cols=251  Identities=19%  Similarity=0.218  Sum_probs=188.9

Q ss_pred             eeEEEEEEeeccCceEEEEEEecCCCCceEEEEecCCCCC---hHHHHHHHHHhhhccccccccccceeeecc------c
Q 018699           48 KKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFP---WEFYMYRQLDQRISGRERSSFGFAHRIHLY------S  118 (351)
Q Consensus        48 ~~Y~i~~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~~---~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~  118 (351)
                      .+|++.+.||+|+||+||+|+ +..+|+.||||++.....   .|..++       ....|++++.+..++..      .
T Consensus        54 ~~y~~~~~lG~G~fg~Vy~~~-~~~~~~~vaiK~~~~~~~~~~~E~~il-------~~l~hpniv~l~~~~~~~~~~~~~  125 (420)
T 1j1b_A           54 VSYTDTKVIGNGSFGVVYQAK-LCDSGELVAIKKVLQDKRFKNRELQIM-------RKLDHCNIVRLRYFFYSSGEKKDE  125 (420)
T ss_dssp             EEEEEEEEEEECSSEEEEEEE-ETTTCCEEEEEEEECCTTSCCHHHHHH-------HTCCCTTBCCEEEEEEEEETTTTE
T ss_pred             ceEEeeeEEeeCCCEEEEEEE-ECCCCcEEEEEEecccchhHHHHHHHH-------HHcCCCCccceeeEEeccCCCCcc
Confidence            479999999999999999999 567789999998865432   233332       23356777777665532      2


Q ss_pred             CeeEEEEEecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeeccCCC
Q 018699          119 DYSILVCDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRS  198 (351)
Q Consensus       119 ~~~~lv~e~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~~~  198 (351)
                      .++++||||++ ++|.+.+......+..+++..++.++.||+.||.|||++||+||||||+||+++.+            
T Consensus       126 ~~~~lv~e~~~-~~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NILl~~~------------  192 (420)
T 1j1b_A          126 VYLNLVLDYVP-ETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPD------------  192 (420)
T ss_dssp             EEEEEEEECCC-EEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHTTTEECSCCSGGGEEEETT------------
T ss_pred             eeEEeehhccc-ccHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCChhhEEEeCC------------
Confidence            35689999995 57877776654446789999999999999999999999999999999999999831            


Q ss_pred             CCcccCCeEEeecCCccccccCCCCccccccccCCCcccceeccCC-CCCccchHhHHHHHHHHHHhCccccccccCCCC
Q 018699          199 GPWQDQGLCLVDWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQEKK-PWKFQVDTYGLCAIVHMMLHNSYMEIEKKASPD  277 (351)
Q Consensus       199 ~~~~~~~~~l~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~-~~~~~~DiwslG~il~~l~~g~~p~~~~~~~~~  277 (351)
                          .+.+||+|||++.....   ........+|+.|+|||++.+. .++.++|||||||++|+|++|..||........
T Consensus       193 ----~~~~kl~DFG~a~~~~~---~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~G~~pf~~~~~~~~  265 (420)
T 1j1b_A          193 ----TAVLKLCDFGSAKQLVR---GEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQ  265 (420)
T ss_dssp             ----TTEEEECCCTTCEECCT---TCCCCSCCSCTTSCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHH
T ss_pred             ----CCeEEeccchhhhhccc---CCCceeeeeCCCcCCHHHHcCCCCCCchhhhHHHHHHHHHHHhCCCCCCCCCHHHH
Confidence                24579999999975432   2223456789999999998764 789999999999999999999999965431100


Q ss_pred             -----------------------Cceeee--cCcc----hhhhhHHHHHHHHHHHHhcCCCCCChHHHHHHHHHHHHHH
Q 018699          278 -----------------------GGLVYL--PKLS----FKRYWKVELWKSLFTNLLNMSSGNDKEVLQNLQKSFQDYL  327 (351)
Q Consensus       278 -----------------------~~~~~~--~~~~----~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~~~~~~~~  327 (351)
                                             ..+.+.  ...+    ++...+ +.+.+||.+||.+||.+||++.|++.|+|.+-+
T Consensus       266 l~~i~~~lg~p~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~-~~~~~Li~~~L~~dP~~R~t~~e~l~hp~f~~~  343 (420)
T 1j1b_A          266 LVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTP-PEAIALCSRLLEYTPTARLTPLEACAHSFFDEL  343 (420)
T ss_dssp             HHHHHHHHCSCCHHHHHHHCSCCCCCCCCCCCCCCHHHHSCTTSC-HHHHHHHHHHSCSSGGGSCCHHHHHTSGGGGGG
T ss_pred             HHHHHHHhCCCCHHHHHhhChhhhhhccCccCCCCHHHhcCCCCC-HHHHHHHHHhccCChhHCCCHHHHhCCHhhccc
Confidence                                   000000  0001    111123 789999999999999999999999999875433

>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens}

Probab=100.00  E-value=1.6e-41  Score=307.51  Aligned_cols=255  Identities=14%  Similarity=0.120  Sum_probs=187.2

Q ss_pred             EEcCeeEEEEEEeeccCceEEEEEEecCCCCce----EEEEecCCCCC-hHHHHHHHHHhhhccccccccccceeeeccc
Q 018699           44 EIGGKKYQIKGCAGQGGFAKVFKAYVNGDPEDV----VALKIQKPAFP-WEFYMYRQLDQRISGRERSSFGFAHRIHLYS  118 (351)
Q Consensus        44 ~i~~~~Y~i~~~lg~G~~g~V~~a~~~~~~~~~----vaiK~~~~~~~-~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  118 (351)
                      .+..++|++.+.||+|+||+||+|++ ..+++.    ||+|.+..... .....+...........|++++.+..++..+
T Consensus        11 ~l~~~~y~~~~~lG~G~~g~Vy~~~~-~~~~~~~~~kv~iK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~   89 (327)
T 3lzb_A           11 ILKETEFKKIKVLGSGAFGTVYKGLW-IPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTS   89 (327)
T ss_dssp             ECCTTTEEEEEEEEECSSEEEEEEEE-CCTTCSCCEEEEEEEECCCSSCCCHHHHHHHHHHHTTCCBTTBCCCCEEEESS
T ss_pred             ccCHhHceEEEEeeeCCCeEEEEEEE-cCCCceEEEEEEEEeeccccCHHHHHHHHHHHHHHHhCCCCCeeEEEEEEecC
Confidence            35678999999999999999999995 455554    47776654322 1122222223334455688888888777654


Q ss_pred             CeeEEEEEecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeeccCCC
Q 018699          119 DYSILVCDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRS  198 (351)
Q Consensus       119 ~~~~lv~e~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~~~  198 (351)
                      . .++|++++.+++|.+++...   +..+++..++.++.|++.||.|||++||+||||||+||+++              
T Consensus        90 ~-~~~v~~~~~~g~L~~~l~~~---~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIl~~--------------  151 (327)
T 3lzb_A           90 T-VQLITQLMPFGCLLDYVREH---KDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVK--------------  151 (327)
T ss_dssp             S-EEEEECCCSSCBHHHHHHHT---TTCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEE--------------
T ss_pred             C-ceEEEEecCCCcHHHHHHhc---CCCCCHHHHHHHHHHHHHHHHHHhhCCCcCCCCCHHHEEEc--------------
Confidence            4 78899999999999999875   46799999999999999999999999999999999999999              


Q ss_pred             CCcccCCeEEeecCCccccccCCCCccccccccCCCcccceeccCCCCCccchHhHHHHHHHHHHh-CccccccccCCCC
Q 018699          199 GPWQDQGLCLVDWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQEKKPWKFQVDTYGLCAIVHMMLH-NSYMEIEKKASPD  277 (351)
Q Consensus       199 ~~~~~~~~~l~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~-g~~p~~~~~~~~~  277 (351)
                         .++.++|+|||++................+++.|+|||++.+..++.++|||||||++|+|++ |..||........
T Consensus       152 ---~~~~~kL~DfG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~~  228 (327)
T 3lzb_A          152 ---TPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEI  228 (327)
T ss_dssp             ---ETTEEEECCTTC----------------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGH
T ss_pred             ---CCCCEEEccCcceeEccCccccccccCCCccccccCHHHHcCCCCChHHHHHHHHHHHHHHHHCCCCCCCCCCHHHH
Confidence               677799999999975433222233344456788999999999999999999999999999999 9999975443211


Q ss_pred             Ccee-eecCcchhhhhHHHHHHHHHHHHhcCCCCCChHHHHHHHH
Q 018699          278 GGLV-YLPKLSFKRYWKVELWKSLFTNLLNMSSGNDKEVLQNLQK  321 (351)
Q Consensus       278 ~~~~-~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~~  321 (351)
                      .... .....+.+..++ ..+.+||.+||..||.+||++.|++..
T Consensus       229 ~~~~~~~~~~~~~~~~~-~~l~~li~~~l~~dp~~Rps~~ell~~  272 (327)
T 3lzb_A          229 SSILEKGERLPQPPICT-IDVYMIMRKCWMIDADSRPKFRELIIE  272 (327)
T ss_dssp             HHHHHTTCCCCCCTTBC-HHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             HHHHHcCCCCCCCccCC-HHHHHHHHHHcCCChhHCcCHHHHHHH
Confidence            0000 111222333344 789999999999999999999999874

>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*

Probab=100.00  E-value=2.5e-41  Score=300.40  Aligned_cols=254  Identities=12%  Similarity=0.084  Sum_probs=193.3

Q ss_pred             EEcCeeEEEEEEeeccCceEEEEEEecCCCCceEEEEecCCCCChH-H------HHHHHHHhhhccccccccccceeeec
Q 018699           44 EIGGKKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFPWE-F------YMYRQLDQRISGRERSSFGFAHRIHL  116 (351)
Q Consensus        44 ~i~~~~Y~i~~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~~~e-~------~~~~~~~~~~~~~~~~~~~~~~~~~~  116 (351)
                      .+..++|++.+.||+|+||+||+|+ +..+++.||+|++....... .      ..+...........|++++.+..+..
T Consensus        15 ~~~~~~y~~~~~lg~G~~g~V~~~~-~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~   93 (287)
T 4f0f_A           15 TLADNEIEYEKQIGKGGFGLVHKGR-LVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIVKLYGLMH   93 (287)
T ss_dssp             BCCSTTEEEEEECCCCSSSCEEEEE-ETTTCCEEEEEECCCCTTTCCHHHHCCSHHHHHHHHHHTTCCCTTBCCEEEEET
T ss_pred             hhhhccceehhccccCCceeEEEEE-EcCCceEEEEEEeeccccccchhHHHHHHHHHHHHHHHHhCCCCCchhhheeec
Confidence            4567899999999999999999999 56788999999986543221 1      22222233344456888888877765


Q ss_pred             ccCeeEEEEEecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCC--ceecCCCCCcEEEeecCCcceeec
Q 018699          117 YSDYSILVCDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVG--IIHGDFKPDNLLIRYARDELTVLD  194 (351)
Q Consensus       117 ~~~~~~lv~e~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~--i~H~dl~p~Nill~~~~~~~~~~~  194 (351)
                      ...  ++||||+++++|.+.+...   +..+++..++.++.|++.|+.|||++|  |+|+||||+||+++.++..     
T Consensus        94 ~~~--~lv~e~~~~~~L~~~l~~~---~~~~~~~~~~~~~~~l~~~l~~lH~~~~~ivH~dikp~Nil~~~~~~~-----  163 (287)
T 4f0f_A           94 NPP--RMVMEFVPCGDLYHRLLDK---AHPIKWSVKLRLMLDIALGIEYMQNQNPPIVHRDLRSPNIFLQSLDEN-----  163 (287)
T ss_dssp             TTT--EEEEECCTTCBHHHHHHCT---TSCCCHHHHHHHHHHHHHHHHHHHTSSSCCBCSCCSGGGEEESCCCTT-----
T ss_pred             CCC--eEEEEecCCCCHHHHHhcc---cCCccHHHHHHHHHHHHHHHHHHHhCCCCeecCCCCcceEEEeccCCC-----
Confidence            444  6999999999999888764   467999999999999999999999999  9999999999999843321     


Q ss_pred             cCCCCCcccCCeEEeecCCccccccCCCCccccccccCCCcccceec--cCCCCCccchHhHHHHHHHHHHhCccccccc
Q 018699          195 HDRSGPWQDQGLCLVDWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQ--EKKPWKFQVDTYGLCAIVHMMLHNSYMEIEK  272 (351)
Q Consensus       195 ~~~~~~~~~~~~~l~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~--~~~~~~~~~DiwslG~il~~l~~g~~p~~~~  272 (351)
                             ....++|+|||++....     .......|++.|+|||++  .+..++.++|||||||++|+|++|..||...
T Consensus       164 -------~~~~~kl~Dfg~~~~~~-----~~~~~~~g~~~y~aPE~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~  231 (287)
T 4f0f_A          164 -------APVCAKVADFGLSQQSV-----HSVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEY  231 (287)
T ss_dssp             -------CSCCEEECCCTTCBCCS-----SCEECCCCCCTTSCGGGSSCSSCEECHHHHHHHHHHHHHHHHHSSCTTTTC
T ss_pred             -------CceeEEeCCCCcccccc-----ccccccCCCccccCchhhccCCCCcCchhhHHHHHHHHHHHHcCCCCCccc
Confidence                   23348999999886422     234456789999999998  4456789999999999999999999999754


Q ss_pred             cCCCCC----ceeeecCcchhhhhHHHHHHHHHHHHhcCCCCCChHHHHHHHH
Q 018699          273 KASPDG----GLVYLPKLSFKRYWKVELWKSLFTNLLNMSSGNDKEVLQNLQK  321 (351)
Q Consensus       273 ~~~~~~----~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~~  321 (351)
                      ......    ..........+...+ +.+.+||.+||+.||.+||++.++++.
T Consensus       232 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~l~~li~~~l~~dp~~Rps~~~ll~~  283 (287)
T 4f0f_A          232 SYGKIKFINMIREEGLRPTIPEDCP-PRLRNVIELCWSGDPKKRPHFSYIVKE  283 (287)
T ss_dssp             CCCHHHHHHHHHHSCCCCCCCTTSC-HHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             cccHHHHHHHHhccCCCCCCCcccC-HHHHHHHHHHhcCChhhCcCHHHHHHH
Confidence            322100    000112223334444 789999999999999999999999875

>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*

Probab=100.00  E-value=6.3e-42  Score=300.91  Aligned_cols=253  Identities=13%  Similarity=0.080  Sum_probs=197.4

Q ss_pred             EEcCeeEEEEEEeeccCceEEEEEEecCCCCceEEEEecCCCCChHHHHHHHHHhhhccccccccccceeeecccCeeEE
Q 018699           44 EIGGKKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFPWEFYMYRQLDQRISGRERSSFGFAHRIHLYSDYSIL  123 (351)
Q Consensus        44 ~i~~~~Y~i~~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  123 (351)
                      .+..++|++.+.||+|+||+||+|.+  .+++.||+|++...........+++ .......|++++....+....+..++
T Consensus         4 ~i~~~~y~~~~~lg~G~~g~V~~~~~--~~~~~vaiK~~~~~~~~~~~~~~e~-~~l~~l~h~~i~~~~~~~~~~~~~~l   80 (267)
T 3t9t_A            4 VIDPSELTFVQEIGSGQFGLVHLGYW--LNKDKVAIKTIREGAMSEEDFIEEA-EVMMKLSHPKLVQLYGVCLEQAPICL   80 (267)
T ss_dssp             BCCGGGEEEEEEEEEETTEEEEEEEE--TTTEEEEEEEECTTTBCHHHHHHHH-HHHHTCCCTTBCCEEEEECSSSSCEE
T ss_pred             EEchhheeeeeEecCCCceeEEEEEe--cCCCeEEEEEccccCCCHHHHHHHH-HHHHhCCCCCEeeEEEEEccCCCeEE
Confidence            45678999999999999999999995  3567899999987655443333333 33344568889888888888889999


Q ss_pred             EEEecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeeccCCCCCccc
Q 018699          124 VCDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSGPWQD  203 (351)
Q Consensus       124 v~e~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~~~~~~~~  203 (351)
                      ||||+++++|.+++...   ...+++..++.++.|++.|+.|||++|++|+||+|+||+++                 .+
T Consensus        81 v~e~~~~~~L~~~~~~~---~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~Nili~-----------------~~  140 (267)
T 3t9t_A           81 VTEFMEHGCLSDYLRTQ---RGLFAAETLLGMCLDVCEGMAYLEEACVIHRDLAARNCLVG-----------------EN  140 (267)
T ss_dssp             EECCCTTCBHHHHHHHT---TTCCCHHHHHHHHHHHHHHHHHHHHTTCCCSSCCGGGEEEC-----------------GG
T ss_pred             EEeCCCCCcHHHHHhhC---cccCCHHHHHHHHHHHHHHHHHHHhCCcccCCCchheEEEC-----------------CC
Confidence            99999999999999874   35789999999999999999999999999999999999998                 77


Q ss_pred             CCeEEeecCCccccccCCCCccccccccCCCcccceeccCCCCCccchHhHHHHHHHHHHh-CccccccccCCCCCcee-
Q 018699          204 QGLCLVDWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQEKKPWKFQVDTYGLCAIVHMMLH-NSYMEIEKKASPDGGLV-  281 (351)
Q Consensus       204 ~~~~l~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~-g~~p~~~~~~~~~~~~~-  281 (351)
                      +.++|+|||++...... .........+++.|+|||++.+..++.++||||||+++|+|++ |..||............ 
T Consensus       141 ~~~kl~dfg~~~~~~~~-~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~i~  219 (267)
T 3t9t_A          141 QVIKVSDFGMTRFVLDD-QYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDIS  219 (267)
T ss_dssp             GCEEECCTTGGGGBCCH-HHHSTTSTTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHH
T ss_pred             CCEEEcccccccccccc-cccccccccccccccChhhhcCCCccchhchhhhHHHHHHHhccCCCCCCCCCHHHHHHHHh
Confidence            88999999988643210 0111233456778999999988889999999999999999999 89998653321000000 


Q ss_pred             eecCcchhhhhHHHHHHHHHHHHhcCCCCCChHHHHHHHH
Q 018699          282 YLPKLSFKRYWKVELWKSLFTNLLNMSSGNDKEVLQNLQK  321 (351)
Q Consensus       282 ~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~~  321 (351)
                      .......+...+ +.+.++|.+||+.||++||++.+++++
T Consensus       220 ~~~~~~~~~~~~-~~l~~li~~~l~~~p~~Rps~~~ll~~  258 (267)
T 3t9t_A          220 TGFRLYKPRLAS-THVYQIMNHCWRERPEDRPAFSRLLRQ  258 (267)
T ss_dssp             TTCCCCCCTTSC-HHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             cCCcCCCCccCc-HHHHHHHHHHccCChhhCcCHHHHHHH
Confidence            001111222333 789999999999999999999999876

>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ...

Probab=100.00  E-value=5.8e-42  Score=309.43  Aligned_cols=246  Identities=18%  Similarity=0.203  Sum_probs=194.3

Q ss_pred             EEEEcCeeEEEEEEeeccCceEEEEEEecCCCCceEEEEecCCCC-------------ChHHHHHHHHHhhhcccccccc
Q 018699           42 TIEIGGKKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAF-------------PWEFYMYRQLDQRISGRERSSF  108 (351)
Q Consensus        42 ~~~i~~~~Y~i~~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~-------------~~e~~~~~~~~~~~~~~~~~~~  108 (351)
                      ......++|++.+.||+|+||+||+|. +..+++.||||++....             ..|...++.+.+     .++++
T Consensus        37 ~~~~~~~~y~~~~~lg~G~~g~Vy~~~-~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~-----~~~~i  110 (320)
T 3a99_A           37 EKEPLESQYQVGPLLGSGGFGSVYSGI-RVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSS-----GFSGV  110 (320)
T ss_dssp             ---CCTTTEEEEEECSSSSSCEEEEEE-ETTTTEEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCS-----SSCSB
T ss_pred             ccCCccCceEEEEEEeeCCCeEEEEEE-ECCCCcEEEEEEEecccchhhhhhhhhhHHHHHHHHHHhhcc-----CCCCc
Confidence            344557899999999999999999999 56788999999975431             123333333322     35678


Q ss_pred             ccceeeecccCeeEEEEEecCC-CCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecC
Q 018699          109 GFAHRIHLYSDYSILVCDYLSQ-GTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYAR  187 (351)
Q Consensus       109 ~~~~~~~~~~~~~~lv~e~~~~-~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~  187 (351)
                      +....++..++..++|||++.+ ++|.+++..    +..+++..++.++.|++.||.|||++||+||||+|+||+++.  
T Consensus       111 ~~~~~~~~~~~~~~lv~e~~~~~~~L~~~l~~----~~~l~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~--  184 (320)
T 3a99_A          111 IRLLDWFERPDSFVLILERPEPVQDLFDFITE----RGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDL--  184 (320)
T ss_dssp             CCEEEEEECSSEEEEEEECCSSEEEHHHHHHH----HCSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEET--
T ss_pred             eEEEEEEecCCcEEEEEEcCCCCccHHHHHhc----cCCCCHHHHHHHHHHHHHHHHHHHHCCcEeCCCCHHHEEEeC--
Confidence            8888888888899999999975 899999987    367999999999999999999999999999999999999983  


Q ss_pred             CcceeeccCCCCCcccCCeEEeecCCccccccCCCCccccccccCCCcccceeccCCCC-CccchHhHHHHHHHHHHhCc
Q 018699          188 DELTVLDHDRSGPWQDQGLCLVDWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQEKKPW-KFQVDTYGLCAIVHMMLHNS  266 (351)
Q Consensus       188 ~~~~~~~~~~~~~~~~~~~~l~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~-~~~~DiwslG~il~~l~~g~  266 (351)
                                    .++.++|+|||++....    ........||+.|+|||++.+..+ +.++|||||||++|+|++|.
T Consensus       185 --------------~~~~~kL~Dfg~~~~~~----~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~  246 (320)
T 3a99_A          185 --------------NRGELKLIDFGSGALLK----DTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGD  246 (320)
T ss_dssp             --------------TTTEEEECCCTTCEECC----SSCBCCCCSCGGGSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSS
T ss_pred             --------------CCCCEEEeeCccccccc----cccccCCCCCccCCChHHhccCCCCCccchHHhHHHHHHHHHHCC
Confidence                          24569999999986543    223345578999999999977665 68899999999999999999


Q ss_pred             cccccccCCCCCceeeecCcchhhhhHHHHHHHHHHHHhcCCCCCChHHHHHHHHHHH
Q 018699          267 YMEIEKKASPDGGLVYLPKLSFKRYWKVELWKSLFTNLLNMSSGNDKEVLQNLQKSFQ  324 (351)
Q Consensus       267 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~~~~~  324 (351)
                      .||..........      ...+...+ +.+.+||.+||+.||++||++.++++|+|.
T Consensus       247 ~pf~~~~~~~~~~------~~~~~~~~-~~~~~li~~~l~~dp~~Rps~~~ll~hp~~  297 (320)
T 3a99_A          247 IPFEHDEEIIRGQ------VFFRQRVS-SECQHLIRWCLALRPSDRPTFEEIQNHPWM  297 (320)
T ss_dssp             CSCCSHHHHHHCC------CCCSSCCC-HHHHHHHHHHTCSSGGGSCCHHHHHTSGGG
T ss_pred             CCCCChhhhhccc------ccccccCC-HHHHHHHHHHccCChhhCcCHHHHhcCHhh
Confidence            9997543221111      11222233 789999999999999999999999999863

>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}

Probab=100.00  E-value=4.7e-42  Score=306.08  Aligned_cols=253  Identities=16%  Similarity=0.091  Sum_probs=193.0

Q ss_pred             EEEEeeccCceEEEEEEecCCCCceEEEEecCCCCChHHHHHHHHHhhhccccccccccceeeecccCeeEEEEEecCCC
Q 018699           52 IKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFPWEFYMYRQLDQRISGRERSSFGFAHRIHLYSDYSILVCDYLSQG  131 (351)
Q Consensus        52 i~~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~  131 (351)
                      ....||+|+||+||+|. +..+++.||+|.+..........+...........|++++....++...+..++||||++++
T Consensus        26 ~~~~lg~G~~g~Vy~~~-~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~  104 (295)
T 2clq_A           26 DRVVLGKGTYGIVYAGR-DLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSFSENGFIKIFMEQVPGG  104 (295)
T ss_dssp             SBCEEEECSSSEEEEEE-ETTTCCEEEEEEEECCCC---HHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECCSEE
T ss_pred             CcEEEeecCcEEEEEEE-ECCCCeEEEEEEccCCchHHHHHHHHHHHHHHhCCCCCEeeEeeEEEeCCcEEEEEEeCCCC
Confidence            34499999999999999 56788999999987654433333333334445567889988888888889999999999999


Q ss_pred             CHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeeccCCCCCcccCCeEEeec
Q 018699          132 TLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSGPWQDQGLCLVDW  211 (351)
Q Consensus       132 sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~~~~~~~~~~~~l~Df  211 (351)
                      +|.+++..... ...+++..++.++.|++.||.|||++||+|+||+|+||+++.                .++.++|+||
T Consensus       105 ~L~~~l~~~~~-~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~----------------~~~~~kl~Df  167 (295)
T 2clq_A          105 SLSALLRSKWG-PLKDNEQTIGFYTKQILEGLKYLHDNQIVHRDIKGDNVLINT----------------YSGVLKISDF  167 (295)
T ss_dssp             EHHHHHHHTTC-CCTTCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEET----------------TTCCEEECCT
T ss_pred             CHHHHHHhhcc-CCCccHHHHHHHHHHHHHHHHHHHhCCEEccCCChhhEEEEC----------------CCCCEEEeec
Confidence            99999986421 235678899999999999999999999999999999999982                1677999999


Q ss_pred             CCccccccCCCCccccccccCCCcccceeccCCC--CCccchHhHHHHHHHHHHhCccccccccCCCCCce---eeecCc
Q 018699          212 GRGIDLHLFPDNMEFEGDCRTSGFRCIEMQEKKP--WKFQVDTYGLCAIVHMMLHNSYMEIEKKASPDGGL---VYLPKL  286 (351)
Q Consensus       212 g~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~--~~~~~DiwslG~il~~l~~g~~p~~~~~~~~~~~~---~~~~~~  286 (351)
                      |++......  ........|++.|+|||++.+..  ++.++||||||+++|+|++|..||...........   ......
T Consensus       168 g~~~~~~~~--~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~  245 (295)
T 2clq_A          168 GTSKRLAGI--NPCTETFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPFYELGEPQAAMFKVGMFKVHP  245 (295)
T ss_dssp             TTCEESCC-------CCCCCCGGGCCHHHHHHGGGGCSHHHHHHHHHHHHHHHHHTSCTTGGGSSHHHHHHHHHHHCCCC
T ss_pred             ccccccCCC--CCcccccCCCccccChhhhcCCCCCCCcHHHHHHHHHHHHHHHHCCCCccCCCchhHHHHhhccccccc
Confidence            998654321  22234456899999999986643  78999999999999999999999975432100000   011122


Q ss_pred             chhhhhHHHHHHHHHHHHhcCCCCCChHHHHHHHHHHHH
Q 018699          287 SFKRYWKVELWKSLFTNLLNMSSGNDKEVLQNLQKSFQD  325 (351)
Q Consensus       287 ~~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~~~~~~  325 (351)
                      ..+..++ +.+.+||.+||+.||++||++.+++.|+|..
T Consensus       246 ~~~~~~~-~~~~~li~~~l~~dp~~Rps~~~ll~~~~~~  283 (295)
T 2clq_A          246 EIPESMS-AEAKAFILKCFEPDPDKRACANDLLVDEFLK  283 (295)
T ss_dssp             CCCTTSC-HHHHHHHHHTTCSSTTTSCCHHHHHTSGGGC
T ss_pred             cccccCC-HHHHHHHHHHccCChhhCCCHHHHhcChhhh
Confidence            3334444 7899999999999999999999999998643

>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ...

Probab=100.00  E-value=7.9e-42  Score=308.60  Aligned_cols=260  Identities=13%  Similarity=0.079  Sum_probs=198.5

Q ss_pred             EEcCeeEEEEEEeeccCceEEEEEEecC----CCCceEEEEecCCCCChH-HHHHHHHHhhhccccccccccceeeeccc
Q 018699           44 EIGGKKYQIKGCAGQGGFAKVFKAYVNG----DPEDVVALKIQKPAFPWE-FYMYRQLDQRISGRERSSFGFAHRIHLYS  118 (351)
Q Consensus        44 ~i~~~~Y~i~~~lg~G~~g~V~~a~~~~----~~~~~vaiK~~~~~~~~e-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  118 (351)
                      .+..++|++.+.||+|+||+||+|.+..    .+++.||+|++....... ...+...........|++++.+..+...+
T Consensus        21 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~  100 (322)
T 1p4o_A           21 EVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQG  100 (322)
T ss_dssp             BCCGGGEEEEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTSCHHHHHHHHHHHHHGGGCCCTTBCCEEEEECSS
T ss_pred             cchhhheeeeeEeccCCceEEEeeeecCccCCCCceEEEEEecccccCHHHHHHHHHHHHHHHhcCCCCEeeeEEEEccC
Confidence            4567899999999999999999998532    457899999987654322 12222223344555788888888888888


Q ss_pred             CeeEEEEEecCCCCHHHHHHHHHhh------CCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCccee
Q 018699          119 DYSILVCDYLSQGTLQDAINSYVVI------GKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTV  192 (351)
Q Consensus       119 ~~~~lv~e~~~~~sL~~~l~~~~~~------~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~  192 (351)
                      +..++||||+++++|.+++......      ...+++..++.++.|++.||.|||++||+||||||+||+++        
T Consensus       101 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dikp~NIli~--------  172 (322)
T 1p4o_A          101 QPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVA--------  172 (322)
T ss_dssp             SSCEEEEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHHHTTCBCSCCSGGGEEEC--------
T ss_pred             CccEEEEEeCCCCcHHHHHHHhchhhccCCCCCCcCHHHHHHHHHHHHHHHHHHHHCCCccCCCccceEEEc--------
Confidence            8999999999999999999875321      13568899999999999999999999999999999999999        


Q ss_pred             eccCCCCCcccCCeEEeecCCccccccCCCCccccccccCCCcccceeccCCCCCccchHhHHHHHHHHHHh-Ccccccc
Q 018699          193 LDHDRSGPWQDQGLCLVDWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQEKKPWKFQVDTYGLCAIVHMMLH-NSYMEIE  271 (351)
Q Consensus       193 ~~~~~~~~~~~~~~~l~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~-g~~p~~~  271 (351)
                               .++.++|+|||++................+++.|+|||++.+..++.++|||||||++|+|++ |..||..
T Consensus       173 ---------~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~  243 (322)
T 1p4o_A          173 ---------EDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQG  243 (322)
T ss_dssp             ---------TTCCEEECCTTCCCGGGGGGCEEGGGSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTSCCTTTT
T ss_pred             ---------CCCeEEECcCccccccccccccccccCCCCCCCccChhhhccCCCCchhhHHHHHHHHHHHHhcCCCcccc
Confidence                     778899999999865432211122233456888999999998889999999999999999999 8888865


Q ss_pred             ccCCCCCcee-eecCcchhhhhHHHHHHHHHHHHhcCCCCCChHHHHHHHH
Q 018699          272 KKASPDGGLV-YLPKLSFKRYWKVELWKSLFTNLLNMSSGNDKEVLQNLQK  321 (351)
Q Consensus       272 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~~  321 (351)
                      .......... .......+..++ +.+.+||.+||+.||.+||++.+++++
T Consensus       244 ~~~~~~~~~~~~~~~~~~~~~~~-~~l~~li~~~l~~dp~~Rps~~e~l~~  293 (322)
T 1p4o_A          244 LSNEQVLRFVMEGGLLDKPDNCP-DMLFELMRMCWQYNPKMRPSFLEIISS  293 (322)
T ss_dssp             SCHHHHHHHHHTTCCCCCCTTCC-HHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             CCHHHHHHHHHcCCcCCCCCCCC-HHHHHHHHHHcCCCcccCcCHHHHHHH
Confidence            3321000000 001111223334 789999999999999999999999987

>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ...

Probab=100.00  E-value=1e-41  Score=309.58  Aligned_cols=264  Identities=13%  Similarity=0.074  Sum_probs=197.2

Q ss_pred             ceEEEEcCeeEEEEEEeeccCceEEEEEEecC------CCCceEEEEecCCCCChH-HHHHHHHHhhhccc-cccccccc
Q 018699           40 NKTIEIGGKKYQIKGCAGQGGFAKVFKAYVNG------DPEDVVALKIQKPAFPWE-FYMYRQLDQRISGR-ERSSFGFA  111 (351)
Q Consensus        40 ~~~~~i~~~~Y~i~~~lg~G~~g~V~~a~~~~------~~~~~vaiK~~~~~~~~e-~~~~~~~~~~~~~~-~~~~~~~~  111 (351)
                      ...+.+..++|++.+.||+|+||+||+|.+..      .+++.||+|++....... ...+......+... .|++++.+
T Consensus        27 ~~~~~~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~  106 (334)
T 2pvf_A           27 DPKWEFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINL  106 (334)
T ss_dssp             CTTTBCCGGGEEEEEEEEECSSCEEEEEEETTCSTTCC---CEEEEEECCTTCCHHHHHHHHHHHHHHHHHCCCTTBCCE
T ss_pred             CccccCCHhHeEEeeEEeecCceeEEEeEeccccccccccceEEEEeeeccCCcHHHHHHHHHHHHHHHHhhcCCCEeeE
Confidence            34456778999999999999999999999522      457789999988654322 11122212222233 68888888


Q ss_pred             eeeecccCeeEEEEEecCCCCHHHHHHHHHhh------------CCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCC
Q 018699          112 HRIHLYSDYSILVCDYLSQGTLQDAINSYVVI------------GKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPD  179 (351)
Q Consensus       112 ~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~~------------~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~  179 (351)
                      ..++...+..++||||+++++|.+++......            ...+++..++.++.||+.||.|||++||+|+||||+
T Consensus       107 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~  186 (334)
T 2pvf_A          107 LGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAAR  186 (334)
T ss_dssp             EEEECSSSCCEEEEECCTTCBHHHHHHTTSCTTCCSCC--------CCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGG
T ss_pred             EEEEccCCceEEEEECCCCCcHHHHHHHhccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCccc
Confidence            88888888999999999999999999864210            124889999999999999999999999999999999


Q ss_pred             cEEEeecCCcceeeccCCCCCcccCCeEEeecCCccccccCCCCccccccccCCCcccceeccCCCCCccchHhHHHHHH
Q 018699          180 NLLIRYARDELTVLDHDRSGPWQDQGLCLVDWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQEKKPWKFQVDTYGLCAIV  259 (351)
Q Consensus       180 Nill~~~~~~~~~~~~~~~~~~~~~~~~l~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il  259 (351)
                      ||+++                 .++.++|+|||++................+++.|+|||++.+..++.++|||||||++
T Consensus       187 NIll~-----------------~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il  249 (334)
T 2pvf_A          187 NVLVT-----------------ENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLM  249 (334)
T ss_dssp             GEEEC-----------------TTCCEEECCCTTCEECTTTSSEECCSCCCCCGGGCCHHHHHHCEECHHHHHHHHHHHH
T ss_pred             eEEEc-----------------CCCCEEEccccccccccccccccccCCCCcccceeChHHhcCCCcChHHHHHHHHHHH
Confidence            99998                 7788999999998754322211222334567889999999888889999999999999


Q ss_pred             HHHHh-CccccccccCCCCCce-eeecCcchhhhhHHHHHHHHHHHHhcCCCCCChHHHHHHHH
Q 018699          260 HMMLH-NSYMEIEKKASPDGGL-VYLPKLSFKRYWKVELWKSLFTNLLNMSSGNDKEVLQNLQK  321 (351)
Q Consensus       260 ~~l~~-g~~p~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~~  321 (351)
                      |+|++ |..||........... ........+..++ ..+.++|.+||..||.+||++.+++.+
T Consensus       250 ~ellt~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~-~~l~~li~~~l~~dp~~Rps~~ell~~  312 (334)
T 2pvf_A          250 WEIFTLGGSPYPGIPVEELFKLLKEGHRMDKPANCT-NELYMMMRDCWHAVPSQRPTFKQLVED  312 (334)
T ss_dssp             HHHHTTSCCSSTTCCHHHHHHHHHHTCCCCCCTTCC-HHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             HHHHhCCCCCcCcCCHHHHHHHHhcCCCCCCCccCC-HHHHHHHHHHccCChhhCcCHHHHHHH
Confidence            99999 9999865332100000 0011122233344 789999999999999999999999875

>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A*

Probab=100.00  E-value=8.9e-42  Score=307.10  Aligned_cols=265  Identities=10%  Similarity=0.056  Sum_probs=190.2

Q ss_pred             cceEEEEcCeeEEEEEEeeccCceEEEEEEecC--CCCceEEEEecCCCCChH--HHHHHHHHhhhccccccccccceee
Q 018699           39 RNKTIEIGGKKYQIKGCAGQGGFAKVFKAYVNG--DPEDVVALKIQKPAFPWE--FYMYRQLDQRISGRERSSFGFAHRI  114 (351)
Q Consensus        39 ~~~~~~i~~~~Y~i~~~lg~G~~g~V~~a~~~~--~~~~~vaiK~~~~~~~~e--~~~~~~~~~~~~~~~~~~~~~~~~~  114 (351)
                      ....+.+..++|++.+.||+|+||+||+|.+..  .+++.||+|++.......  ...+......+....|++++.+..+
T Consensus        25 ~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~  104 (313)
T 3brb_A           25 KLEDVVIDRNLLILGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVIRLLGV  104 (313)
T ss_dssp             CTTTTBCCGGGEEEEEEEEC-CCCCEEEEEEECTTSCEEEEEEEEC---CCCHHHHHHHHHHHHHHHTCCCTTBCCCCEE
T ss_pred             hHHhcccCHHHeeeccceeecCCeEEEEEEEeccCCceeEEEEEEEeccccchhHHHHHHHHHHHHhcCCCCCeeeeeEE
Confidence            344556778999999999999999999998633  256789999987654332  2222223334455568888888777


Q ss_pred             ecccC-----eeEEEEEecCCCCHHHHHHHHH--hhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecC
Q 018699          115 HLYSD-----YSILVCDYLSQGTLQDAINSYV--VIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYAR  187 (351)
Q Consensus       115 ~~~~~-----~~~lv~e~~~~~sL~~~l~~~~--~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~  187 (351)
                      ....+     ..++||||+++++|.+++....  ..+..+++..++.++.|++.||.|||++||+|+||||+||+++   
T Consensus       105 ~~~~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dikp~NIli~---  181 (313)
T 3brb_A          105 CIEMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGMEYLSNRNFLHRDLAARNCMLR---  181 (313)
T ss_dssp             EEC-------CEEEEEECCTTCBHHHHHHHTTBTTSCCCCCHHHHHHHHHHHHHHHHHHHTTTCCCCCCSGGGEEEC---
T ss_pred             EeeccccCCcccEEEEecccCCCHHHHHHHhhhhcCCccCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCcceEEEc---
Confidence            65433     4599999999999999986432  1135689999999999999999999999999999999999999   


Q ss_pred             CcceeeccCCCCCcccCCeEEeecCCccccccCCCCccccccccCCCcccceeccCCCCCccchHhHHHHHHHHHHh-Cc
Q 018699          188 DELTVLDHDRSGPWQDQGLCLVDWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQEKKPWKFQVDTYGLCAIVHMMLH-NS  266 (351)
Q Consensus       188 ~~~~~~~~~~~~~~~~~~~~l~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~-g~  266 (351)
                                    .++.++|+|||++................+++.|+|||.+.+..++.++||||||+++|+|++ |.
T Consensus       182 --------------~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~  247 (313)
T 3brb_A          182 --------------DDMTVCVADFGLSKKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGM  247 (313)
T ss_dssp             --------------TTSCEEECSCSCC----------------CCGGGSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTSC
T ss_pred             --------------CCCcEEEeecCcceecccccccCcccccCCCccccCchhhcCCCccchhhhHHHHHHHHHHHhcCC
Confidence                          778899999999865432211122233456788999999999999999999999999999999 88


Q ss_pred             cccccccCCCCCcee-eecCcchhhhhHHHHHHHHHHHHhcCCCCCChHHHHHHHH
Q 018699          267 YMEIEKKASPDGGLV-YLPKLSFKRYWKVELWKSLFTNLLNMSSGNDKEVLQNLQK  321 (351)
Q Consensus       267 ~p~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~~  321 (351)
                      .||............ .......+..++ +.+.++|.+||..||.+||++.+++.+
T Consensus       248 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~-~~l~~li~~~l~~dp~~Rps~~~l~~~  302 (313)
T 3brb_A          248 TPYPGVQNHEMYDYLLHGHRLKQPEDCL-DELYEIMYSCWRTDPLDRPTFSVLRLQ  302 (313)
T ss_dssp             CSSTTCCGGGHHHHHHTTCCCCCBTTCC-HHHHHHHHHTTCSSGGGSCCHHHHHHH
T ss_pred             CCCccCCHHHHHHHHHcCCCCCCCcccc-HHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence            888654332100000 011122333344 789999999999999999999999875

>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A*

Probab=100.00  E-value=4.4e-41  Score=302.15  Aligned_cols=254  Identities=16%  Similarity=0.093  Sum_probs=186.4

Q ss_pred             CeeEEEEEEeeccCceEEEEEEecCCCCceEEEEecCCCCCh---HHHHHHHHHhhhccccccccccceeeecccCeeEE
Q 018699           47 GKKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFPW---EFYMYRQLDQRISGRERSSFGFAHRIHLYSDYSIL  123 (351)
Q Consensus        47 ~~~Y~i~~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~~~---e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  123 (351)
                      .++|++.+.||+|+||.||+|. +..+|+.||+|++......   ....+......+....+++++.+..++...+..++
T Consensus        31 ~~~y~~~~~lg~G~~g~Vy~~~-~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~l  109 (310)
T 2wqm_A           31 LANFRIEKKIGRGQFSEVYRAA-CLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNI  109 (310)
T ss_dssp             GGGEEEEEEEECC--CEEEEEE-ETTTCCEEEEEEECTTSSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEE
T ss_pred             ccceEEEEeecCCCCceEEEEE-EcCCCceEEEEeeehhhccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCcEEE
Confidence            3689999999999999999999 5677899999998753221   12222222233445578888888888888899999


Q ss_pred             EEEecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeeccCCCCCccc
Q 018699          124 VCDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSGPWQD  203 (351)
Q Consensus       124 v~e~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~~~~~~~~  203 (351)
                      ||||+.+++|.+++......+..+++..++.++.|++.||.|||++|++|+||+|+||+++                 .+
T Consensus       110 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~NIl~~-----------------~~  172 (310)
T 2wqm_A          110 VLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHMHSRRVMHRDIKPANVFIT-----------------AT  172 (310)
T ss_dssp             EEECCCSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEC-----------------TT
T ss_pred             EEecCCCCCHHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHhhCCeeCCCCcHHHEEEc-----------------CC
Confidence            9999999999999987655567799999999999999999999999999999999999999                 77


Q ss_pred             CCeEEeecCCccccccCCCCccccccccCCCcccceeccCCCCCccchHhHHHHHHHHHHhCccccccccCCCCC--cee
Q 018699          204 QGLCLVDWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQEKKPWKFQVDTYGLCAIVHMMLHNSYMEIEKKASPDG--GLV  281 (351)
Q Consensus       204 ~~~~l~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~p~~~~~~~~~~--~~~  281 (351)
                      +.++|+|||++.....  .........+++.|+|||++.+..++.++||||||+++|+|++|..||.........  ...
T Consensus       173 ~~~kl~Dfg~~~~~~~--~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~  250 (310)
T 2wqm_A          173 GVVKLGDLGLGRFFSS--KTTAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKI  250 (310)
T ss_dssp             SCEEECCC--------------------CCSSCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTC---CCHHHHHHHH
T ss_pred             CCEEEEeccceeeecC--CCccccccCCCeeEeChHHhCCCCCCchhhHHHHHHHHHHHHhCCCCCcccchhHHHHHHHh
Confidence            8899999998864331  122233456899999999999988999999999999999999999998654321000  000


Q ss_pred             -e-ecCcchhhhhHHHHHHHHHHHHhcCCCCCChHHHHHHHH
Q 018699          282 -Y-LPKLSFKRYWKVELWKSLFTNLLNMSSGNDKEVLQNLQK  321 (351)
Q Consensus       282 -~-~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~~  321 (351)
                       . ......+..++ +.+.+||.+||..||++||++.+++..
T Consensus       251 ~~~~~~~~~~~~~~-~~l~~li~~~l~~dp~~Rps~~~il~~  291 (310)
T 2wqm_A          251 EQCDYPPLPSDHYS-EELRQLVNMCINPDPEKRPDVTYVYDV  291 (310)
T ss_dssp             HTTCSCCCCTTTSC-HHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             hcccCCCCcccccC-HHHHHHHHHHcCCChhhCCCHHHHHHH
Confidence             0 00001112233 789999999999999999999999874

>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis}

Probab=100.00  E-value=2.7e-41  Score=313.54  Aligned_cols=249  Identities=19%  Similarity=0.233  Sum_probs=184.6

Q ss_pred             CeeEEEEEEeeccCceEEEEEEecCCCCceEEEEecCCCCC---hHHHHHHHHHhhhccccccccccceeeecc------
Q 018699           47 GKKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFP---WEFYMYRQLDQRISGRERSSFGFAHRIHLY------  117 (351)
Q Consensus        47 ~~~Y~i~~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~~---~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~------  117 (351)
                      ..+|++.+.||+|+||+||+|++ ..+++ ||+|++.....   .|...+       ....|++++.+..++..      
T Consensus        39 ~~~Y~~~~~lG~G~~g~V~~a~~-~~~~~-~aikk~~~~~~~~~~E~~il-------~~l~h~niv~l~~~~~~~~~~~~  109 (394)
T 4e7w_A           39 EIAYTNCKVIGNGSFGVVFQAKL-VESDE-VAIKKVLQDKRFKNRELQIM-------RIVKHPNVVDLKAFFYSNGDKKD  109 (394)
T ss_dssp             EEEEEEEEEEEEETTEEEEEEEE-TTTEE-EEEEEEECCTTSCCHHHHHH-------HTCCCTTBCCEEEEEEEESSSSS
T ss_pred             cceEEEeEEEeeCCCeEEEEEEE-CCCCe-EEEEEEecCcchHHHHHHHH-------HhCCCCCcceEEEEEEecCCCCC
Confidence            46899999999999999999994 45555 77776654322   233322       23357788877776633      


Q ss_pred             cCeeEEEEEecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeeccCC
Q 018699          118 SDYSILVCDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDR  197 (351)
Q Consensus       118 ~~~~~lv~e~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~~  197 (351)
                      ..+.++||||+++ ++...+......+..+++..++.++.||+.||+|||++||+||||||+||+++.            
T Consensus       110 ~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~Nill~~------------  176 (394)
T 4e7w_A          110 EVFLNLVLEYVPE-TVYRASRHYAKLKQTMPMLLIKLYMYQLLRSLAYIHSIGICHRDIKPQNLLLDP------------  176 (394)
T ss_dssp             CEEEEEEEECCSE-EHHHHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEET------------
T ss_pred             ceEEEEEeeccCc-cHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHCCccCCCCCHHHEEEcC------------
Confidence            2347899999955 565555544433678999999999999999999999999999999999999983            


Q ss_pred             CCCcccCCeEEeecCCccccccCCCCccccccccCCCcccceeccCC-CCCccchHhHHHHHHHHHHhCccccccccCCC
Q 018699          198 SGPWQDQGLCLVDWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQEKK-PWKFQVDTYGLCAIVHMMLHNSYMEIEKKASP  276 (351)
Q Consensus       198 ~~~~~~~~~~l~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~-~~~~~~DiwslG~il~~l~~g~~p~~~~~~~~  276 (351)
                          .++.+||+|||++....   .........+|+.|+|||++.+. .++.++|||||||++|+|++|..||.......
T Consensus       177 ----~~~~~kL~DFG~a~~~~---~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~  249 (394)
T 4e7w_A          177 ----PSGVLKLIDFGSAKILI---AGEPNVSYICSRYYRAPELIFGATNYTTNIDIWSTGCVMAELMQGQPLFPGESGID  249 (394)
T ss_dssp             ----TTTEEEECCCTTCEECC---TTCCCCSSCSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH
T ss_pred             ----CCCcEEEeeCCCccccc---CCCCCcccccCcCccCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHH
Confidence                35669999999986542   22233456789999999998764 58999999999999999999999997543210


Q ss_pred             C-------------------------CceeeecCcch----hhhhHHHHHHHHHHHHhcCCCCCChHHHHHHHHHHHH
Q 018699          277 D-------------------------GGLVYLPKLSF----KRYWKVELWKSLFTNLLNMSSGNDKEVLQNLQKSFQD  325 (351)
Q Consensus       277 ~-------------------------~~~~~~~~~~~----~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~~~~~~  325 (351)
                      .                         ..+......++    +...+ +.+.+||.+||++||.+|||+.|++.|||.+
T Consensus       250 ~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~li~~~L~~dP~~R~t~~e~l~hp~f~  326 (394)
T 4e7w_A          250 QLVEIIKVLGTPSREQIKTMNPNYMEHKFPQIRPHPFSKVFRPRTP-PDAIDLISRLLEYTPSARLTAIEALCHPFFD  326 (394)
T ss_dssp             HHHHHHHHHCCCCHHHHHHHCGGGSSSCCCCCCCCCHHHHSCTTCC-HHHHHHHHHHCCSSGGGSCCHHHHHTSGGGS
T ss_pred             HHHHHHHHhCCCCHHHHHhhChhhhhhccccccCCcHHHhccccCC-HHHHHHHHHHhCCChhhCCCHHHHhcChhhh
Confidence            0                         00000011111    11123 7899999999999999999999999999754

>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens}

Probab=100.00  E-value=7.2e-41  Score=301.59  Aligned_cols=278  Identities=15%  Similarity=0.169  Sum_probs=193.7

Q ss_pred             ceEEEEcCeeEEEEEEeeccCceEEEEEEecCCCCceEEEEecCCCCChH--HHHHHHHHhhhccccccccccceeeecc
Q 018699           40 NKTIEIGGKKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFPWE--FYMYRQLDQRISGRERSSFGFAHRIHLY  117 (351)
Q Consensus        40 ~~~~~i~~~~Y~i~~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~~~e--~~~~~~~~~~~~~~~~~~~~~~~~~~~~  117 (351)
                      +....+..++|++.+.||+|+||+||+|. +..+|+.||||++......+  ...+.+.........|++++.+..+...
T Consensus        17 ~~~~~~~~~~y~~~~~lg~G~~g~V~~~~-~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~~~~~   95 (318)
T 2dyl_A           17 GQRYQAEINDLENLGEMGSGTCGQVWKMR-FRKTGHVIAVKQMRRSGNKEENKRILMDLDVVLKSHDCPYIVQCFGTFIT   95 (318)
T ss_dssp             SSEEECCGGGEEEEEEC------CEEEEE-ETTTCCEEEEEEEETTSCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEEC
T ss_pred             chhhhhhhccccccceeeecCCeeEEEEE-EecCCeEEEEEEecccccchHHHHHHHHHHHHHHhcCCCceeeEEEEEec
Confidence            34455566789999999999999999999 56778999999987654432  2333333334455678899999988888


Q ss_pred             cCeeEEEEEecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHC-CceecCCCCCcEEEeecCCcceeeccC
Q 018699          118 SDYSILVCDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDV-GIIHGDFKPDNLLIRYARDELTVLDHD  196 (351)
Q Consensus       118 ~~~~~lv~e~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~-~i~H~dl~p~Nill~~~~~~~~~~~~~  196 (351)
                      .+..++||||+ ++.+..+....   +..+++..++.++.|++.|+.|||++ ||+|+||+|+||+++            
T Consensus        96 ~~~~~lv~e~~-~~~~~~l~~~~---~~~~~~~~~~~~~~~i~~~l~~lH~~~~i~H~dlkp~Nil~~------------  159 (318)
T 2dyl_A           96 NTDVFIAMELM-GTCAEKLKKRM---QGPIPERILGKMTVAIVKALYYLKEKHGVIHRDVKPSNILLD------------  159 (318)
T ss_dssp             SSEEEEEECCC-SEEHHHHHHHH---TSCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCGGGEEEC------------
T ss_pred             CCcEEEEEecc-CCcHHHHHHHh---ccCCCHHHHHHHHHHHHHHHHHHHhhCCEEeCCCCHHHEEEC------------
Confidence            89999999999 66777766554   56899999999999999999999995 999999999999998            


Q ss_pred             CCCCcccCCeEEeecCCccccccCCCCccccccccCCCcccceecc-----CCCCCccchHhHHHHHHHHHHhCcccccc
Q 018699          197 RSGPWQDQGLCLVDWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQE-----KKPWKFQVDTYGLCAIVHMMLHNSYMEIE  271 (351)
Q Consensus       197 ~~~~~~~~~~~l~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~-----~~~~~~~~DiwslG~il~~l~~g~~p~~~  271 (351)
                           .++.++|+|||++.....   ........+++.|+|||++.     +..++.++|||||||++|+|++|..||..
T Consensus       160 -----~~~~~kl~dfg~~~~~~~---~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~  231 (318)
T 2dyl_A          160 -----ERGQIKLCDFGISGRLVD---DKAKDRSAGCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQFPYKN  231 (318)
T ss_dssp             -----TTSCEEECCCTTC-----------------CCTTCCHHHHC--------CCTHHHHHHHHHHHHHHHHSSCTTTT
T ss_pred             -----CCCCEEEEECCCchhccC---CccccccCCCccccChhhcccccccccCCccccchhhHHHHHHHHHhCCCCCCC
Confidence                 778899999998864321   22233456899999999984     45678999999999999999999999975


Q ss_pred             ccCCCC--Cceee--ecCcchhhhhHHHHHHHHHHHHhcCCCCCChHHHHHHHHHHHHHHhh-ChHHHHHHHHHHHH
Q 018699          272 KKASPD--GGLVY--LPKLSFKRYWKVELWKSLFTNLLNMSSGNDKEVLQNLQKSFQDYLCS-NPQLLKNLKELLAK  343 (351)
Q Consensus       272 ~~~~~~--~~~~~--~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~~~~~~~~~~-~~~~~~~~~~~~~~  343 (351)
                      ......  .....  .+..+....++ +.+.+||.+||+.||.+||++.++++|+|...... ......-+...+..
T Consensus       232 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~l~~li~~~l~~dp~~Rps~~~ll~h~~~~~~~~~~~~~~~~~~~~~~~  307 (318)
T 2dyl_A          232 CKTDFEVLTKVLQEEPPLLPGHMGFS-GDFQSFVKDCLTKDHRKRPKYNKLLEHSFIKRYETLEVDVASWFKDVMAK  307 (318)
T ss_dssp             CCSHHHHHHHHHHSCCCCCCSSSCCC-HHHHHHHHHHTCSCTTTSCCHHHHTTSHHHHHHHHSCCCHHHHHHHHHHT
T ss_pred             CCccHHHHHHHhccCCCCCCccCCCC-HHHHHHHHHHccCChhHCcCHHHHhhCHHHHhcccccchhHHHhhcccCC
Confidence            221100  00000  01111111233 78999999999999999999999999987654433 33333334444433

>4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A

Probab=100.00  E-value=5.6e-41  Score=309.09  Aligned_cols=252  Identities=20%  Similarity=0.245  Sum_probs=190.6

Q ss_pred             EEEEcCeeEEEEEEeeccCceEEEEEEecCCCCceEEEEecCCCCChHHHH--HHHHHhhhccccccccccceeeecccC
Q 018699           42 TIEIGGKKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFPWEFYM--YRQLDQRISGRERSSFGFAHRIHLYSD  119 (351)
Q Consensus        42 ~~~i~~~~Y~i~~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~~~e~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~  119 (351)
                      .+++ .++|++.+.||+|+||+||+|. +..+|+.||||++......+...  ............+++++.+..++...+
T Consensus        37 ~~~l-~~~y~~~~~lG~G~~g~Vy~~~-~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~  114 (371)
T 4exu_A           37 AWEL-PKTYVSPTHVGSGAYGSVCSAI-DKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPAS  114 (371)
T ss_dssp             EEEE-ETTEEEEEEEEECSSEEEEEEE-ETTTTEEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCS
T ss_pred             eecc-cccEEEEeEEecCCCeEEEEEE-ECCCCCEEEEEEecccccchhHHHHHHHHHHHHHhcCCCCchhhhhheeccC
Confidence            3444 4799999999999999999999 57789999999988765443211  112222334456788888887776555


Q ss_pred             ee------EEEEEecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceee
Q 018699          120 YS------ILVCDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVL  193 (351)
Q Consensus       120 ~~------~lv~e~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~  193 (351)
                      ..      |+||||+. ++|.+.+.      ..+++..++.++.|++.||+|||++||+||||||+||+++         
T Consensus       115 ~~~~~~~~~lv~e~~~-~~l~~~~~------~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIll~---------  178 (371)
T 4exu_A          115 SLRNFYDFYLVMPFMQ-TDLQKIMG------MEFSEEKIQYLVYQMLKGLKYIHSAGVVHRDLKPGNLAVN---------  178 (371)
T ss_dssp             SSTTCCCCEEEEECCC-EEHHHHTT------SCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEC---------
T ss_pred             CcccceeEEEEEcccc-ccHHHHhh------cCCCHHHHHHHHHHHHHHHHHHHHCCCcCCCcCHHHeEEC---------
Confidence            43      99999995 68887763      4589999999999999999999999999999999999999         


Q ss_pred             ccCCCCCcccCCeEEeecCCccccccCCCCccccccccCCCcccceeccC-CCCCccchHhHHHHHHHHHHhCccccccc
Q 018699          194 DHDRSGPWQDQGLCLVDWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQEK-KPWKFQVDTYGLCAIVHMMLHNSYMEIEK  272 (351)
Q Consensus       194 ~~~~~~~~~~~~~~l~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~~DiwslG~il~~l~~g~~p~~~~  272 (351)
                              .++.++|+|||++....     .......||+.|+|||++.+ ..++.++|||||||++|+|++|..||...
T Consensus       179 --------~~~~~kL~Dfg~a~~~~-----~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~  245 (371)
T 4exu_A          179 --------EDCELKILDFGLARHAD-----AEMTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGK  245 (371)
T ss_dssp             --------TTCCEEECSTTCC-------------CTTCCCTTSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSCCCS
T ss_pred             --------CCCCEEEEecCcccccc-----cCcCCcccCccccCHHHhcCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCC
Confidence                    77889999999986432     22345578999999999877 77899999999999999999999999754


Q ss_pred             cCCCCCce----------------------------eeecCcchh---hhhHHHHHHHHHHHHhcCCCCCChHHHHHHHH
Q 018699          273 KASPDGGL----------------------------VYLPKLSFK---RYWKVELWKSLFTNLLNMSSGNDKEVLQNLQK  321 (351)
Q Consensus       273 ~~~~~~~~----------------------------~~~~~~~~~---~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~~  321 (351)
                      ........                            ...+.....   ...+ +.+.+||.+||++||++|||+.|+|+|
T Consensus       246 ~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~li~~~L~~dP~~Rpt~~ell~h  324 (371)
T 4exu_A          246 DYLDQLTQILKVTGVPGTEFVQKLNDKAAKSYIQSLPQTPRKDFTQLFPRAS-PQAADLLEKMLELDVDKRLTAAQALTH  324 (371)
T ss_dssp             SHHHHHHHHHHHHCCCCHHHHTTCSCHHHHHHHHHSCCCCCCCHHHHSTTSC-HHHHHHHHHHSCSCTTTSCCHHHHHTS
T ss_pred             ChHHHHHHHHHHhCCCcHHHHHHhhhhhhhhhhhccCCCcchhHHHhccccC-hHHHHHHHHHCCCChhhcCCHHHHhcC
Confidence            31100000                            000111111   1123 789999999999999999999999999


Q ss_pred             HHHH
Q 018699          322 SFQD  325 (351)
Q Consensus       322 ~~~~  325 (351)
                      ||..
T Consensus       325 p~f~  328 (371)
T 4exu_A          325 PFFE  328 (371)
T ss_dssp             GGGT
T ss_pred             cccc
Confidence            8754

>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens}

Probab=100.00  E-value=2.1e-41  Score=314.52  Aligned_cols=260  Identities=16%  Similarity=0.193  Sum_probs=195.8

Q ss_pred             EEcCeeEEEEEEeeccCceEEEEEEecCCCCceEEEEecCCCCCh-HHHHHHHHHhhhccccccccccceeeeccc--Ce
Q 018699           44 EIGGKKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFPW-EFYMYRQLDQRISGRERSSFGFAHRIHLYS--DY  120 (351)
Q Consensus        44 ~i~~~~Y~i~~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~~~-e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~  120 (351)
                      .+.+++|++.+.||+|+||+||+|+ +..+|+.||||++...... ................|++++.+..+....  ..
T Consensus         5 ~~~~~~y~i~~~LG~G~~g~Vy~~~-~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~   83 (396)
T 4eut_A            5 STSNHLWLLSDILGQGATANVFRGR-HKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRH   83 (396)
T ss_dssp             ECSSEEEEEEEEEEECSSEEEEEEE-ETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCC
T ss_pred             CCCCCceEEEEEEEcCCCeEEEEEE-ECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCCCeEEEeeccCCCCe
Confidence            4567899999999999999999999 5678899999998753211 112222222233445678888888776544  37


Q ss_pred             eEEEEEecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeeccCCCCC
Q 018699          121 SILVCDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSGP  200 (351)
Q Consensus       121 ~~lv~e~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~~~~~  200 (351)
                      .++||||+++++|.+++..... ...+++..++.++.||+.||+|||++||+||||||+||++...+.            
T Consensus        84 ~~lv~e~~~~g~L~~~l~~~~~-~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~------------  150 (396)
T 4eut_A           84 KVLIMEFCPCGSLYTVLEEPSN-AYGLPESEFLIVLRDVVGGMNHLRENGIVHRNIKPGNIMRVIGED------------  150 (396)
T ss_dssp             EEEEECCCTTEEHHHHTTSGGG-TTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEEECTT------------
T ss_pred             eEEEEecCCCCCHHHHHHhhhc-ccCCCHHHHHHHHHHHHHHHHHHHHCCEEECCcCHHHEEEeecCC------------
Confidence            8999999999999999976421 234899999999999999999999999999999999999843222            


Q ss_pred             cccCCeEEeecCCccccccCCCCccccccccCCCcccceeccC--------CCCCccchHhHHHHHHHHHHhCccccccc
Q 018699          201 WQDQGLCLVDWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQEK--------KPWKFQVDTYGLCAIVHMMLHNSYMEIEK  272 (351)
Q Consensus       201 ~~~~~~~l~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~--------~~~~~~~DiwslG~il~~l~~g~~p~~~~  272 (351)
                       ..+.+||+|||++....   .........||+.|+|||++.+        ..++.++|||||||++|+|++|..||...
T Consensus       151 -~~~~~kL~DFG~a~~~~---~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwSlG~il~el~tg~~Pf~~~  226 (396)
T 4eut_A          151 -GQSVYKLTDFGAARELE---DDEQFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPF  226 (396)
T ss_dssp             -SCEEEEECCGGGCEECC---CGGGSSCSSSCCTTCCHHHHHHHCC--CHHHHHHHHHHHHHHHHHHHHHHHSSCSEECT
T ss_pred             -CceeEEEecCCCceEcc---CCCccccccCCccccCHHHhhccccccccccCCCcHHHHHHHHHHHHHHHHCCCCCCCC
Confidence             45669999999986532   2233445678999999999864        45678999999999999999999999643


Q ss_pred             cCCC-------------------------CCceee----ecCcchhhhhHHHHHHHHHHHHhcCCCCCChHHHHHHHHH
Q 018699          273 KASP-------------------------DGGLVY----LPKLSFKRYWKVELWKSLFTNLLNMSSGNDKEVLQNLQKS  322 (351)
Q Consensus       273 ~~~~-------------------------~~~~~~----~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~~~  322 (351)
                      ....                         .+...+    .....++.... +.+.++|.+||+.||++||++.|++.+.
T Consensus       227 ~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-~~l~~ll~~~L~~dP~~R~s~~e~l~~l  304 (396)
T 4eut_A          227 EGPRRNKEVMYKIITGKPSGAISGVQKAENGPIDWSGDMPVSCSLSRGLQ-VLLTPVLANILEADQEKCWGFDQFFAET  304 (396)
T ss_dssp             TCTTTCHHHHHHHHHSCCTTCCEEEECSTTCCEEEESSCCTTCSSCHHHH-HHHHHHHHHHSCCCTTTSCCHHHHHHHH
T ss_pred             CcccchHHHHHHHhcCCCcccchhheeccCCCcccCccCCcccccchHHH-hhchHHHHHhhccChhhhccHHHHHHHH
Confidence            2210                         011111    11122334444 7899999999999999999999998764

>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B*

Probab=100.00  E-value=2.1e-41  Score=300.19  Aligned_cols=245  Identities=18%  Similarity=0.188  Sum_probs=190.9

Q ss_pred             CeeEEEEEEeeccCceEEEEEEecCCCCceEEEEecCCCCChHHHHHHHHHhhhccccccccccceeeecc---------
Q 018699           47 GKKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFPWEFYMYRQLDQRISGRERSSFGFAHRIHLY---------  117 (351)
Q Consensus        47 ~~~Y~i~~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------  117 (351)
                      +++|++.+.||+|+||.||+|. +..+++.||+|++...... ....   ...+....|++++....++..         
T Consensus        10 ~~~y~~~~~lg~G~~g~V~~~~-~~~~~~~vavK~~~~~~~~-~~~e---~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~   84 (284)
T 2a19_B           10 GMDFKEIELIGSGGFGQVFKAK-HRIDGKTYVIKRVKYNNEK-AERE---VKALAKLDHVNIVHYNGCWDGFDYDPETSS   84 (284)
T ss_dssp             HHHEEEEEEEECSSSCCEEEEE-ETTTCCEEEEEEEECCSGG-GHHH---HHHHHHCCCTTBCCEEEEEEEEEEC-----
T ss_pred             ccccceeeeeccCCceEEEEEE-EcCCCeEEEEEEeccccHH-HHHH---HHHHHhCCCCCEEEEeeeEeccccCccccc
Confidence            4789999999999999999999 5677899999998765322 1111   111223356777776665432         


Q ss_pred             -------cCeeEEEEEecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcc
Q 018699          118 -------SDYSILVCDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDEL  190 (351)
Q Consensus       118 -------~~~~~lv~e~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~  190 (351)
                             ....++||||+++++|.+++....  +..+++..++.++.|++.|+.|||++||+|+||+|+||+++      
T Consensus        85 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dlkp~Nil~~------  156 (284)
T 2a19_B           85 KNSSRSKTKCLFIQMEFCDKGTLEQWIEKRR--GEKLDKVLALELFEQITKGVDYIHSKKLINRDLKPSNIFLV------  156 (284)
T ss_dssp             ----CCEEEEEEEEECCCCSCBHHHHHHHGG--GSCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEE------
T ss_pred             ccccccCcceEEEEEeccCCCCHHHHHhhcc--CCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCHHHEEEc------
Confidence                   455799999999999999998643  46789999999999999999999999999999999999999      


Q ss_pred             eeeccCCCCCcccCCeEEeecCCccccccCCCCccccccccCCCcccceeccCCCCCccchHhHHHHHHHHHHhCccccc
Q 018699          191 TVLDHDRSGPWQDQGLCLVDWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQEKKPWKFQVDTYGLCAIVHMMLHNSYMEI  270 (351)
Q Consensus       191 ~~~~~~~~~~~~~~~~~l~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~p~~  270 (351)
                                 .++.++|+|||++.....   ........+++.|+|||++.+..++.++||||||+++|+|++|..|+.
T Consensus       157 -----------~~~~~kl~Dfg~~~~~~~---~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~  222 (284)
T 2a19_B          157 -----------DTKQVKIGDFGLVTSLKN---DGKRTRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELLHVCDTAF  222 (284)
T ss_dssp             -----------ETTEEEECCCTTCEESSC---CSCCCCCCSCCTTSCHHHHHCSCCCTHHHHHHHHHHHHHHHSCCSSHH
T ss_pred             -----------CCCCEEECcchhheeccc---cccccccCCcccccChhhhccCCCcchhhhHHHHHHHHHHHhcCCcch
Confidence                       677799999999865432   222344568999999999999889999999999999999999998876


Q ss_pred             cccCCCCCceeeecCcchhhhhHHHHHHHHHHHHhcCCCCCChHHHHHHHHHH
Q 018699          271 EKKASPDGGLVYLPKLSFKRYWKVELWKSLFTNLLNMSSGNDKEVLQNLQKSF  323 (351)
Q Consensus       271 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~~~~  323 (351)
                      .......    .......+..++ ..+.+||.+||..||.+||++.|++++.+
T Consensus       223 ~~~~~~~----~~~~~~~~~~~~-~~~~~li~~~l~~dp~~Rps~~e~l~~l~  270 (284)
T 2a19_B          223 ETSKFFT----DLRDGIISDIFD-KKEKTLLQKLLSKKPEDRPNTSEILRTLT  270 (284)
T ss_dssp             HHHHHHH----HHHTTCCCTTSC-HHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred             hHHHHHH----HhhcccccccCC-HHHHHHHHHHccCChhhCcCHHHHHHHHH
Confidence            4321100    000111222333 77899999999999999999999999864

>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ...

Probab=100.00  E-value=1.6e-41  Score=302.12  Aligned_cols=253  Identities=16%  Similarity=0.196  Sum_probs=183.1

Q ss_pred             EEEEcCeeEEEEEEeeccCceEEEEEEecCCCCceEEEEecCCCCChHH--HHHHHHHhhhccccccccccceeeecccC
Q 018699           42 TIEIGGKKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFPWEF--YMYRQLDQRISGRERSSFGFAHRIHLYSD  119 (351)
Q Consensus        42 ~~~i~~~~Y~i~~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~~~e~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  119 (351)
                      ..++.+++|++.+.||+|+||+||+|++ .   ..||+|++........  ..+......+....|++++....+. ..+
T Consensus        18 ~~ei~~~~y~~~~~lG~G~~g~Vy~~~~-~---~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~-~~~   92 (289)
T 3og7_A           18 DWEIPDGQITVGQRIGSGSFGTVYKGKW-H---GDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS-TAP   92 (289)
T ss_dssp             CCBCCTTSCEEEEEEEECSSEEEEEEES-S---SEEEEEEESCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEE-CSS
T ss_pred             CCccCccceeeeeEecCCCCeEEEEEEE-c---CceEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCcEEEEEeec-cCC
Confidence            4577889999999999999999999984 2   3499999876543322  2233333445556677887776644 456


Q ss_pred             eeEEEEEecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeeccCCCC
Q 018699          120 YSILVCDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSG  199 (351)
Q Consensus       120 ~~~lv~e~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~~~~  199 (351)
                      ..++||||+++++|.+++...   +..+++..++.++.|++.||.|||++||+|+||||+||+++               
T Consensus        93 ~~~lv~e~~~~~~L~~~l~~~---~~~~~~~~~~~i~~qi~~~L~~lH~~~i~H~Dlkp~Nil~~---------------  154 (289)
T 3og7_A           93 QLAIVTQWCEGSSLYHHLHAS---ETKFEMKKLIDIARQTARGMDYLHAKSIIHRDLKSNNIFLH---------------  154 (289)
T ss_dssp             SCEEEEECCCEEEHHHHHTTC------CCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEE---------------
T ss_pred             ccEEEEEecCCCcHHHHHhhc---cCCCCHHHHHHHHHHHHHHHHHHHhCCcccccCccceEEEC---------------
Confidence            679999999999999998653   45789999999999999999999999999999999999999               


Q ss_pred             CcccCCeEEeecCCccccccCCCCccccccccCCCcccceecc---CCCCCccchHhHHHHHHHHHHhCccccccccCCC
Q 018699          200 PWQDQGLCLVDWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQE---KKPWKFQVDTYGLCAIVHMMLHNSYMEIEKKASP  276 (351)
Q Consensus       200 ~~~~~~~~l~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~---~~~~~~~~DiwslG~il~~l~~g~~p~~~~~~~~  276 (351)
                        .++.++|+|||++................||+.|+|||++.   +..++.++||||||+++|+|++|..||.......
T Consensus       155 --~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~  232 (289)
T 3og7_A          155 --EDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRD  232 (289)
T ss_dssp             --TTTEEEECCCC------------------CCCTTCCHHHHC----CCSCHHHHHHHHHHHHHHHHHSSCTTSSCCCHH
T ss_pred             --CCCCEEEccceeccccccccccccccccCCCccccCchhhcccCCCCCCcccchHHHHHHHHHHHHCCCCccccchHH
Confidence              67789999999987544333334445567899999999986   5678899999999999999999999996533210


Q ss_pred             C-------CceeeecCcchhhhhHHHHHHHHHHHHhcCCCCCChHHHHHHHH
Q 018699          277 D-------GGLVYLPKLSFKRYWKVELWKSLFTNLLNMSSGNDKEVLQNLQK  321 (351)
Q Consensus       277 ~-------~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~~  321 (351)
                      .       ... ..........++ +.+.+||.+||+.||.+||++.++++.
T Consensus       233 ~~~~~~~~~~~-~~~~~~~~~~~~-~~l~~li~~~l~~~p~~Rps~~ell~~  282 (289)
T 3og7_A          233 QIIEMVGRGSL-SPDLSKVRSNCP-KRMKRLMAECLKKKRDERPSFPRILAE  282 (289)
T ss_dssp             HHHHHHHHTSC-CCCTTSSCTTSC-HHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             HHHHHhccccc-CcchhhccccCC-HHHHHHHHHHccCChhhCCCHHHHHHH
Confidence            0       000 011111222333 789999999999999999999998865

>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens}

Probab=100.00  E-value=9.9e-42  Score=311.10  Aligned_cols=253  Identities=15%  Similarity=0.141  Sum_probs=187.4

Q ss_pred             EcCeeEEEEEEeeccCceEEEEEEecCC---CCceEEEEecCCCCCh---HHHHHHHHH--------hhhcccccccccc
Q 018699           45 IGGKKYQIKGCAGQGGFAKVFKAYVNGD---PEDVVALKIQKPAFPW---EFYMYRQLD--------QRISGRERSSFGF  110 (351)
Q Consensus        45 i~~~~Y~i~~~lg~G~~g~V~~a~~~~~---~~~~vaiK~~~~~~~~---e~~~~~~~~--------~~~~~~~~~~~~~  110 (351)
                      +.+++|++.+.||+|+||+||+|.+ ..   ++..||+|+.......   +...++.+.        .......|++++.
T Consensus        34 ~~~~~y~~~~~lg~G~~g~Vy~~~~-~~~~~~~~~~aiK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~ni~~  112 (345)
T 2v62_A           34 MEGNQWVLGKKIGSGGFGLIYLAFP-TNKPEKDARHVVKVEYQENGPLFSELKFYQRVAKKDCIKKWIERKQLDYLGIPL  112 (345)
T ss_dssp             TTSCEEEEEEEC------CEEEEEE-SSSCGGGCCEEEEEEECC-CHHHHHHHHHHHHCCHHHHHHHHHHHTCSCCCCCC
T ss_pred             ccCceEEEEeeEeecCCeEEEEEEe-cCCCCccceEEEEeeecCCcchHHHHHHHHHHhhhHHHHHHHhhccccccCcce
Confidence            4578999999999999999999995 44   6789999998765432   222222221        1233446788888


Q ss_pred             ceeeecc----cCeeEEEEEecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeec
Q 018699          111 AHRIHLY----SDYSILVCDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYA  186 (351)
Q Consensus       111 ~~~~~~~----~~~~~lv~e~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~  186 (351)
                      +..+...    ....|+||||+ +++|.+++...    ..+++..++.++.||+.||+|||++||+||||||+||+++  
T Consensus       113 ~~~~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~----~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~--  185 (345)
T 2v62_A          113 FYGSGLTEFKGRSYRFMVMERL-GIDLQKISGQN----GTFKKSTVLQLGIRMLDVLEYIHENEYVHGDIKAANLLLG--  185 (345)
T ss_dssp             EEEEEEEESSSCEEEEEEEECE-EEEHHHHCBGG----GBCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEE--
T ss_pred             eecccccccCCCcEEEEEEecc-CCCHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCcCHHHEEEc--
Confidence            8877765    67899999999 99999998773    4899999999999999999999999999999999999999  


Q ss_pred             CCcceeeccCCCCCcccC--CeEEeecCCccccccCC-----CCccccccccCCCcccceeccCCCCCccchHhHHHHHH
Q 018699          187 RDELTVLDHDRSGPWQDQ--GLCLVDWGRGIDLHLFP-----DNMEFEGDCRTSGFRCIEMQEKKPWKFQVDTYGLCAIV  259 (351)
Q Consensus       187 ~~~~~~~~~~~~~~~~~~--~~~l~Dfg~a~~~~~~~-----~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il  259 (351)
                                     .++  .++|+|||++.......     .........||+.|+|||++.+..++.++|||||||++
T Consensus       186 ---------------~~~~~~~kL~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il  250 (345)
T 2v62_A          186 ---------------YKNPDQVYLADYGLSYRYCPNGNHKQYQENPRKGHNGTIEFTSLDAHKGVALSRRSDVEILGYCM  250 (345)
T ss_dssp             ---------------SSSTTSEEECCCTTCEESSGGGCCCCCCCCGGGCSCSCTTTCCHHHHHTCCCCHHHHHHHHHHHH
T ss_pred             ---------------cCCCCcEEEEeCCCceecccccccccchhccccccCCCccccCHHHhcCCCCCchhhHHHHHHHH
Confidence                           344  79999999996543211     11222455789999999999999999999999999999


Q ss_pred             HHHHhCccccccccCCCCCce--eeecCcchhh---------hhHHHHHHHHHHHHhcCCCCCChHHHHHHHH
Q 018699          260 HMMLHNSYMEIEKKASPDGGL--VYLPKLSFKR---------YWKVELWKSLFTNLLNMSSGNDKEVLQNLQK  321 (351)
Q Consensus       260 ~~l~~g~~p~~~~~~~~~~~~--~~~~~~~~~~---------~~~~~~~~~li~~~L~~dP~~R~s~~e~l~~  321 (351)
                      |+|++|..||...........  ........+.         ..+ +.+.+||.+||..||++||++.+++..
T Consensus       251 ~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~l~~li~~~l~~dp~~Rps~~~l~~~  322 (345)
T 2v62_A          251 LRWLCGKLPWEQNLKDPVAVQTAKTNLLDELPQSVLKWAPSGSSC-CEIAQFLVCAHSLAYDEKPNYQALKKI  322 (345)
T ss_dssp             HHHHHSSCTTGGGTTCHHHHHHHHHHHHHTTTHHHHHHSCTTSCC-HHHHHHHHHHHTCCTTCCCCHHHHHHH
T ss_pred             HHHHhCCCCccccccccHHHHHHHHhhcccccHHHHhhccccccH-HHHHHHHHHHhhcCcccCCCHHHHHHH
Confidence            999999999965322200000  0000011111         122 689999999999999999999999864

>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A*

Probab=100.00  E-value=1.5e-41  Score=303.96  Aligned_cols=256  Identities=13%  Similarity=0.114  Sum_probs=192.7

Q ss_pred             EcCeeEEEEEEeeccCceEEEEEEe---cCCCCceEEEEecCCCCCh-HHHHHHHHHhhhccccccccccceeeeccc--
Q 018699           45 IGGKKYQIKGCAGQGGFAKVFKAYV---NGDPEDVVALKIQKPAFPW-EFYMYRQLDQRISGRERSSFGFAHRIHLYS--  118 (351)
Q Consensus        45 i~~~~Y~i~~~lg~G~~g~V~~a~~---~~~~~~~vaiK~~~~~~~~-e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--  118 (351)
                      +..++|++.+.||+|+||+||+|++   +..+++.||+|++...... ....+...........|++++....++...  
T Consensus        18 ~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~   97 (302)
T 4e5w_A           18 FEKRFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGG   97 (302)
T ss_dssp             CCGGGEEEEEEEEECSSEEEEEEEECTTSSSCSEEEEEEEEC-----CCHHHHHHHHHHHHTCCCTTBCCEEEEEEC---
T ss_pred             hhhhhhhhhhccCCCCceEEEEEEEccccCccCeEEEEEEecccccchhHHHHHHHHHHHHhCCCCCeeeeeeEEecCCC
Confidence            4457899999999999999999984   3567899999998754321 112222223334445688888888777654  


Q ss_pred             CeeEEEEEecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeeccCCC
Q 018699          119 DYSILVCDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRS  198 (351)
Q Consensus       119 ~~~~lv~e~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~~~  198 (351)
                      ...++||||+++++|.+++...   ...+++..++.++.|++.||+|||++||+|+||||+||+++              
T Consensus        98 ~~~~lv~e~~~~~~L~~~l~~~---~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dikp~Nil~~--------------  160 (302)
T 4e5w_A           98 NGIKLIMEFLPSGSLKEYLPKN---KNKINLKQQLKYAVQICKGMDYLGSRQYVHRDLAARNVLVE--------------  160 (302)
T ss_dssp             CCEEEEEECCTTCBHHHHHHHH---TTTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEE--------------
T ss_pred             ceEEEEEEeCCCCcHHHHHHhc---cccCCHHHHHHHHHHHHHHHHHhhcCCcccCCCchheEEEc--------------
Confidence            6789999999999999999765   46799999999999999999999999999999999999999              


Q ss_pred             CCcccCCeEEeecCCccccccCCCC-ccccccccCCCcccceeccCCCCCccchHhHHHHHHHHHHhCccccccccCC--
Q 018699          199 GPWQDQGLCLVDWGRGIDLHLFPDN-MEFEGDCRTSGFRCIEMQEKKPWKFQVDTYGLCAIVHMMLHNSYMEIEKKAS--  275 (351)
Q Consensus       199 ~~~~~~~~~l~Dfg~a~~~~~~~~~-~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~p~~~~~~~--  275 (351)
                         .++.++|+|||++......... .......+|..|+|||++.+..++.++||||||+++|+|++|..|+......  
T Consensus       161 ---~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~  237 (302)
T 4e5w_A          161 ---SEHQVKIGDFGLTKAIETDKEYYTVKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELLTYCDSDSSPMALFL  237 (302)
T ss_dssp             ---ETTEEEECCCTTCEECCTTCCEEECCCCTTCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHH
T ss_pred             ---CCCCEEECcccccccccCCCcceeccCCCCCCccccCCeeecCCCCCcchhHHHHHHHHHHHHHccCCCcchhhHHh
Confidence               6777999999998754322111 1223446788899999998888899999999999999999999886432110  


Q ss_pred             -----CCCce---------eeecCcchhhhhHHHHHHHHHHHHhcCCCCCChHHHHHHHH
Q 018699          276 -----PDGGL---------VYLPKLSFKRYWKVELWKSLFTNLLNMSSGNDKEVLQNLQK  321 (351)
Q Consensus       276 -----~~~~~---------~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~~  321 (351)
                           .....         ......+.+..++ +.+.+||.+||+.||.+|||+.++++.
T Consensus       238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~l~~li~~~l~~dp~~Rps~~~ll~~  296 (302)
T 4e5w_A          238 KMIGPTHGQMTVTRLVNTLKEGKRLPCPPNCP-DEVYQLMRKCWEFQPSNRTSFQNLIEG  296 (302)
T ss_dssp             HHHCSCCGGGHHHHHHHHHHTTCCCCCCTTCC-HHHHHHHHHTTCSSGGGSCCHHHHHHH
T ss_pred             hccCCcccccCHHHHHHHHhccCCCCCCCCCC-HHHHHHHHHHcCCCCCCCCCHHHHHHH
Confidence                 00000         0011222233344 789999999999999999999999864

>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens}

Probab=100.00  E-value=2.7e-41  Score=306.86  Aligned_cols=252  Identities=17%  Similarity=0.184  Sum_probs=184.2

Q ss_pred             EEcCeeEEEEEEeeccCceEEEEEEecCCCCceEEEEecCCCCChHHHHHHHHHhhhccccccccccceeee-----ccc
Q 018699           44 EIGGKKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFPWEFYMYRQLDQRISGRERSSFGFAHRIH-----LYS  118 (351)
Q Consensus        44 ~i~~~~Y~i~~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~  118 (351)
                      .+..++|++.+.||+|+||+||+|++   +++.||||++.............+. ......|+++..+....     ...
T Consensus         9 ~~~~~~y~~~~~lg~G~~g~Vy~~~~---~~~~vavK~~~~~~~~~~~~e~~~~-~~~~~~h~~i~~~~~~~~~~~~~~~   84 (336)
T 3g2f_A            9 SLDLDNLKLLELIGRGRYGAVYKGSL---DERPVAVKVFSFANRQNFINEKNIY-RVPLMEHDNIARFIVGDERVTADGR   84 (336)
T ss_dssp             CCCTTSEEEEEEEEECSSEEEEEEEE---TTEEEEEEEEEGGGHHHHHHHHHHH-TSTTCCCTTBCCEEEEEEEECTTSC
T ss_pred             CcChHHhheeeecccCCCeEEEEEEE---CCeEEEEEEeeccchhhHHHHHHHH-HHHhccCcchhhheecccccccCCC
Confidence            45568999999999999999999984   4789999998754332222222222 22345677776665422     223


Q ss_pred             CeeEEEEEecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHC---------CceecCCCCCcEEEeecCCc
Q 018699          119 DYSILVCDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDV---------GIIHGDFKPDNLLIRYARDE  189 (351)
Q Consensus       119 ~~~~lv~e~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~---------~i~H~dl~p~Nill~~~~~~  189 (351)
                      ..+++||||+++++|.+++..     ...++..++.++.||+.||.|||++         ||+||||||+||+++     
T Consensus        85 ~~~~lv~e~~~~g~L~~~l~~-----~~~~~~~~~~i~~qi~~~L~~LH~~~~~~~~~~~~ivH~Dikp~Nill~-----  154 (336)
T 3g2f_A           85 MEYLLVMEYYPNGSLXKYLSL-----HTSDWVSSCRLAHSVTRGLAYLHTELPRGDHYKPAISHRDLNSRNVLVK-----  154 (336)
T ss_dssp             EEEEEEECCCTTCBHHHHHHH-----CCBCHHHHHHHHHHHHHHHHHHHCCBCCGGGCBCCEECSSCSGGGEEEC-----
T ss_pred             ceEEEEEecCCCCcHHHHHhh-----cccchhHHHHHHHHHHHHHHHHHhhhccccccccceeecccccceEEEc-----
Confidence            467899999999999999976     3458888999999999999999999         999999999999999     


Q ss_pred             ceeeccCCCCCcccCCeEEeecCCccccccCC------CCccccccccCCCcccceeccC-------CCCCccchHhHHH
Q 018699          190 LTVLDHDRSGPWQDQGLCLVDWGRGIDLHLFP------DNMEFEGDCRTSGFRCIEMQEK-------KPWKFQVDTYGLC  256 (351)
Q Consensus       190 ~~~~~~~~~~~~~~~~~~l~Dfg~a~~~~~~~------~~~~~~~~~g~~~y~aPE~~~~-------~~~~~~~DiwslG  256 (351)
                                  .++.+||+|||++.......      .........||+.|+|||++.+       ..++.++||||||
T Consensus       155 ------------~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG  222 (336)
T 3g2f_A          155 ------------NDGTCVISDFGLSMRLTGNRLVRPGEEDNAAISEVGTIRYMAPEVLEGAVNLRDXESALKQVDMYALG  222 (336)
T ss_dssp             ------------TTSCEEECCCTTCEECSSSSCC---------CCTTSCGGGCCHHHHTTCCCGGGHHHHHHHHHHHHHH
T ss_pred             ------------CCCcEEEeeccceeecccccccCccccccccccCCCccceeCchhhcCCcccccccccccccchHHHH
Confidence                        77889999999996543211      1122334578999999999976       3456789999999


Q ss_pred             HHHHHHHhCccccccccCCCCCcee--------------------eecCcchhhhh-----HHHHHHHHHHHHhcCCCCC
Q 018699          257 AIVHMMLHNSYMEIEKKASPDGGLV--------------------YLPKLSFKRYW-----KVELWKSLFTNLLNMSSGN  311 (351)
Q Consensus       257 ~il~~l~~g~~p~~~~~~~~~~~~~--------------------~~~~~~~~~~~-----~~~~~~~li~~~L~~dP~~  311 (351)
                      |++|+|++|..||............                    ......++..|     ..+.+.+||.+||+.||++
T Consensus       223 ~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~  302 (336)
T 3g2f_A          223 LIYWEIFMRCTDLFPGESVPEYQMAFQTEVGNHPTFEDMQVLVSREKQRPKFPEAWKENSLAVRSLKETIEDCWDQDAEA  302 (336)
T ss_dssp             HHHHHHHTTBGGGSTTSCCCCCCCTTHHHHCSSCCHHHHHHHHTTSCCCCCCCTTCCCCSHHHHHHHHHHHHHSCSSGGG
T ss_pred             HHHHHHHhcCCcCCCccchhHHHHhhhcccCCCchHHHHHhhhcccccCCCCCcccccccchHHHHHHHHHHHhcCChhh
Confidence            9999999998877544332111100                    00111122211     1157999999999999999


Q ss_pred             ChHHHHHHHH
Q 018699          312 DKEVLQNLQK  321 (351)
Q Consensus       312 R~s~~e~l~~  321 (351)
                      |||+.|++..
T Consensus       303 Rps~~e~l~~  312 (336)
T 3g2f_A          303 RLTAQXAEER  312 (336)
T ss_dssp             SCCHHHHHHH
T ss_pred             CcchHHHHHH
Confidence            9999999863

>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A*

Probab=100.00  E-value=2.4e-41  Score=299.67  Aligned_cols=256  Identities=12%  Similarity=0.103  Sum_probs=191.8

Q ss_pred             EEEcCeeEEEEEEeeccCceEEEEEEecCC--CCceEEEEecCCCCChH-HHHHHHHHhhhccccccccccceeeecccC
Q 018699           43 IEIGGKKYQIKGCAGQGGFAKVFKAYVNGD--PEDVVALKIQKPAFPWE-FYMYRQLDQRISGRERSSFGFAHRIHLYSD  119 (351)
Q Consensus        43 ~~i~~~~Y~i~~~lg~G~~g~V~~a~~~~~--~~~~vaiK~~~~~~~~e-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  119 (351)
                      +.+..++|++.+.||+|+||+||+|.+...  ++..||+|++......+ ...+...........|++++....+.. .+
T Consensus         7 ~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~-~~   85 (281)
T 3cc6_A            7 YGIAREDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLIGIIE-EE   85 (281)
T ss_dssp             CSCCGGGEEEEEEEEECSSSEEEEEEEECTTCCEEEEEEEECCTTSCHHHHHHHHHHHHHHHHHCCTTBCCEEEEEC-SS
T ss_pred             ceecccceEEEEEEEecCCeeEEEeEEcCCCCCcceEEEEecccccCchHHHHHHHHHHHHHhCCCCCcceEEEEEc-CC
Confidence            345678999999999999999999986332  35579999988653321 222222222233446788888877765 34


Q ss_pred             eeEEEEEecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeeccCCCC
Q 018699          120 YSILVCDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSG  199 (351)
Q Consensus       120 ~~~lv~e~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~~~~  199 (351)
                      ..++||||+++++|.+++...   +..+++..++.++.|++.|+.|||++||+|+||+|+||+++               
T Consensus        86 ~~~~v~e~~~~~~L~~~l~~~---~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~Nil~~---------------  147 (281)
T 3cc6_A           86 PTWIIMELYPYGELGHYLERN---KNSLKVLTLVLYSLQICKAMAYLESINCVHRDIAVRNILVA---------------  147 (281)
T ss_dssp             SCEEEEECCTTCBHHHHHHHH---TTTCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEEE---------------
T ss_pred             CCEEEEecCCCCCHHHHHHhc---cccCCHHHHHHHHHHHHHHHHHHHHCCcccCCCccceEEEC---------------
Confidence            568999999999999999875   46789999999999999999999999999999999999999               


Q ss_pred             CcccCCeEEeecCCccccccCCCCccccccccCCCcccceeccCCCCCccchHhHHHHHHHHHHh-CccccccccCCCCC
Q 018699          200 PWQDQGLCLVDWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQEKKPWKFQVDTYGLCAIVHMMLH-NSYMEIEKKASPDG  278 (351)
Q Consensus       200 ~~~~~~~~l~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~-g~~p~~~~~~~~~~  278 (351)
                        .++.++|+|||++...... .........+++.|+|||++.+..++.++||||||+++|+|++ |..||.........
T Consensus       148 --~~~~~kl~Dfg~~~~~~~~-~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~llt~g~~p~~~~~~~~~~  224 (281)
T 3cc6_A          148 --SPECVKLGDFGLSRYIEDE-DYYKASVTRLPIKWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQPFFWLENKDVI  224 (281)
T ss_dssp             --ETTEEEECCCCGGGCC----------CCCCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCGGGHH
T ss_pred             --CCCcEEeCccCCCcccccc-cccccccCCCCcceeCchhhccCCCCchhccHHHHHHHHHHHhCCCCCcccCChHHHH
Confidence              6677999999988653321 1112233456788999999988889999999999999999998 99999643322100


Q ss_pred             ce-eeecCcchhhhhHHHHHHHHHHHHhcCCCCCChHHHHHHHH
Q 018699          279 GL-VYLPKLSFKRYWKVELWKSLFTNLLNMSSGNDKEVLQNLQK  321 (351)
Q Consensus       279 ~~-~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~~  321 (351)
                      .. ......+.+...+ +.+.++|.+||..||++||++.+++.+
T Consensus       225 ~~~~~~~~~~~~~~~~-~~l~~li~~~l~~~p~~Rps~~ell~~  267 (281)
T 3cc6_A          225 GVLEKGDRLPKPDLCP-PVLYTLMTRCWDYDPSDRPRFTELVCS  267 (281)
T ss_dssp             HHHHHTCCCCCCTTCC-HHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             HHHhcCCCCCCCCCCC-HHHHHHHHHHccCCchhCcCHHHHHHH
Confidence            00 0011122233344 789999999999999999999999876

>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A*

Probab=100.00  E-value=2.3e-41  Score=307.06  Aligned_cols=261  Identities=11%  Similarity=0.020  Sum_probs=198.2

Q ss_pred             EEEEcCeeEEEEEEeeccCceEEEEEEecCCCC-----ceEEEEecCCCCChH-HHHHHHHHhhhccc-cccccccceee
Q 018699           42 TIEIGGKKYQIKGCAGQGGFAKVFKAYVNGDPE-----DVVALKIQKPAFPWE-FYMYRQLDQRISGR-ERSSFGFAHRI  114 (351)
Q Consensus        42 ~~~i~~~~Y~i~~~lg~G~~g~V~~a~~~~~~~-----~~vaiK~~~~~~~~e-~~~~~~~~~~~~~~-~~~~~~~~~~~  114 (351)
                      .+++..++|++.+.||+|+||+||+|.+ ..++     +.||+|.+......+ ...+.......... .|++++.+..+
T Consensus        40 ~~~~~~~~~~~~~~lG~G~~g~Vy~~~~-~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~  118 (333)
T 2i1m_A           40 KWEFPRNNLQFGKTLGAGAFGKVVEATA-FGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGA  118 (333)
T ss_dssp             GGBCCTTSEEEEEEEEECSSEEEEEEEE-TTCSSSCCCCEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEE
T ss_pred             cccCCHHHceeeeEeccCCCcceEEEEe-cCCCcccchhHHHHHhcccccChHHHHHHHHHHHHHHhhcCCCCeeeEEEE
Confidence            4567789999999999999999999995 3333     479999987654322 22222222223333 68899998888


Q ss_pred             ecccCeeEEEEEecCCCCHHHHHHHHHhh----------CCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEe
Q 018699          115 HLYSDYSILVCDYLSQGTLQDAINSYVVI----------GKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIR  184 (351)
Q Consensus       115 ~~~~~~~~lv~e~~~~~sL~~~l~~~~~~----------~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~  184 (351)
                      +..++..++||||+++++|.+++......          +..+++..++.++.|++.||.|||++||+|+||||+||+++
T Consensus       119 ~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~NIl~~  198 (333)
T 2i1m_A          119 CTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLT  198 (333)
T ss_dssp             ECSSSSCEEEEECCTTEEHHHHHHHHHHHHSCC-------CCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGCEEE
T ss_pred             EecCCceEEEEecCCCCcHHHHHHHhcccccccccccccccccCHHHHHHHHHHHHHHHHHHhcCCcccCCcccceEEEC
Confidence            88888999999999999999999865321          34578999999999999999999999999999999999999


Q ss_pred             ecCCcceeeccCCCCCcccCCeEEeecCCccccccCCCCccccccccCCCcccceeccCCCCCccchHhHHHHHHHHHHh
Q 018699          185 YARDELTVLDHDRSGPWQDQGLCLVDWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQEKKPWKFQVDTYGLCAIVHMMLH  264 (351)
Q Consensus       185 ~~~~~~~~~~~~~~~~~~~~~~~l~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~  264 (351)
                                       .++.++|+|||++................+++.|+|||++.+..++.++|||||||++|+|++
T Consensus       199 -----------------~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t  261 (333)
T 2i1m_A          199 -----------------NGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS  261 (333)
T ss_dssp             -----------------GGGEEEBCCCGGGCCGGGCTTSEECSSCEECGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTT
T ss_pred             -----------------CCCeEEECccccccccccccceeecCCCCCCccccCHHHhccCCCChHHHHHHHHHHHHHHHc
Confidence                             677899999999875432222222334456788999999988889999999999999999998


Q ss_pred             -CccccccccCCCCCcee--eecCcchhhhhHHHHHHHHHHHHhcCCCCCChHHHHHHHH
Q 018699          265 -NSYMEIEKKASPDGGLV--YLPKLSFKRYWKVELWKSLFTNLLNMSSGNDKEVLQNLQK  321 (351)
Q Consensus       265 -g~~p~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~~  321 (351)
                       |..||............  .......+...+ +.+.+||.+||+.||.+||++.+++.+
T Consensus       262 ~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~l~~li~~~l~~~p~~Rps~~~l~~~  320 (333)
T 2i1m_A          262 LGLNPYPGILVNSKFYKLVKDGYQMAQPAFAP-KNIYSIMQACWALEPTHRPTFQQICSF  320 (333)
T ss_dssp             TSCCSSTTCCSSHHHHHHHHHTCCCCCCTTCC-HHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             CCCCCCcccchhHHHHHHHhcCCCCCCCCCCC-HHHHHHHHHHhccChhhCcCHHHHHHH
Confidence             88898654322100000  001111222233 789999999999999999999999875

>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A*

Probab=100.00  E-value=3.3e-41  Score=309.58  Aligned_cols=252  Identities=13%  Similarity=0.139  Sum_probs=182.6

Q ss_pred             CeeEEEEEEeeccCceEEEEEEecCCCCceEEEEecCCCCChH-----------HHHHHHHHhhhccccccccccceeee
Q 018699           47 GKKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFPWE-----------FYMYRQLDQRISGRERSSFGFAHRIH  115 (351)
Q Consensus        47 ~~~Y~i~~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~~~e-----------~~~~~~~~~~~~~~~~~~~~~~~~~~  115 (351)
                      .++|++.+.||+|+||+||+|.+ . .|+.||||++.......           ...+...........|++++.+..++
T Consensus        21 ~~~y~~~~~lg~G~~g~V~~~~~-~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~   98 (362)
T 3pg1_A           21 QSPYTVQRFISSGSYGAVCAGVD-S-EGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFHHPNILGLRDIF   98 (362)
T ss_dssp             TCSCEEEEEEEEETTEEEEEEEC-T-TSCEEEEEEECEECCTTSCEEGGGSHHHHHHHHHHHHHHHHCCCTTBCCCSEEE
T ss_pred             ccceEEeEEeccCCCEEEEEEEC-C-CCCeEEEEeccccCCccchhhhhhhhhHHHHHHHHHHHHHhCCCcCccceeeeE
Confidence            57899999999999999999984 3 48999999876432110           01122222233444678888877766


Q ss_pred             c-----ccCeeEEEEEecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcc
Q 018699          116 L-----YSDYSILVCDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDEL  190 (351)
Q Consensus       116 ~-----~~~~~~lv~e~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~  190 (351)
                      .     .....|+||||+. ++|.+.+...   +..+++..++.++.||+.||.|||++||+|+||||+||+++      
T Consensus        99 ~~~~~~~~~~~~lv~e~~~-~~l~~~~~~~---~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~NIl~~------  168 (362)
T 3pg1_A           99 VHFEEPAMHKLYLVTELMR-TDLAQVIHDQ---RIVISPQHIQYFMYHILLGLHVLHEAGVVHRDLHPGNILLA------  168 (362)
T ss_dssp             EECCTTTCCEEEEEEECCS-EEHHHHHHCT---TSCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEC------
T ss_pred             EeccCCCcceEEEEEccCC-CCHHHHHHhc---ccCCCHHHHHHHHHHHHHHHHHHHHCcCEecCCChHHEEEc------
Confidence            3     3447899999995 6888888753   45799999999999999999999999999999999999998      


Q ss_pred             eeeccCCCCCcccCCeEEeecCCccccccCCCCccccccccCCCcccceeccC-CCCCccchHhHHHHHHHHHHhCcccc
Q 018699          191 TVLDHDRSGPWQDQGLCLVDWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQEK-KPWKFQVDTYGLCAIVHMMLHNSYME  269 (351)
Q Consensus       191 ~~~~~~~~~~~~~~~~~l~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~~DiwslG~il~~l~~g~~p~  269 (351)
                                 .++.++|+|||++....   .........+++.|+|||++.+ ..++.++|||||||++|+|++|..||
T Consensus       169 -----------~~~~~kl~Dfg~~~~~~---~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf  234 (362)
T 3pg1_A          169 -----------DNNDITICDFNLAREDT---ADANKTHYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALF  234 (362)
T ss_dssp             -----------TTCCEEECCTTC------------------CGGGCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSC
T ss_pred             -----------CCCCEEEEecCcccccc---cccccceecccceecCcHHhcCCCCCCcHhHHHhHHHHHHHHHhCCCCC
Confidence                       77789999999986432   1222344578999999999876 67899999999999999999999999


Q ss_pred             ccccCCCC--------------------------------CceeeecCcchhhhhHHHHHHHHHHHHhcCCCCCChHHHH
Q 018699          270 IEKKASPD--------------------------------GGLVYLPKLSFKRYWKVELWKSLFTNLLNMSSGNDKEVLQ  317 (351)
Q Consensus       270 ~~~~~~~~--------------------------------~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~e  317 (351)
                      ........                                ...........+...+ +.+.+||.+||++||.+|||+.|
T Consensus       235 ~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~li~~~L~~dP~~Rpt~~e  313 (362)
T 3pg1_A          235 RGSTFYNQLNKIVEVVGTPKIEDVVMFSSPSARDYLRNSLSNVPARAWTAVVPTAD-PVALDLIAKMLEFNPQRRISTEQ  313 (362)
T ss_dssp             CCSSHHHHHHHHHHHHCCCCHHHHHHTSCHHHHHHTTTCCCCCCCCCHHHHSTTSC-HHHHHHHHHHTCSSGGGSCCHHH
T ss_pred             CCCCHHHHHHHHHHHcCCCChHHhhhccchhhhHHHHhhcccCChhhHHhhCCCCC-HHHHHHHHHHhcCChhhCCCHHH
Confidence            65331100                                0000000001111123 67899999999999999999999


Q ss_pred             HHHHHHHH
Q 018699          318 NLQKSFQD  325 (351)
Q Consensus       318 ~l~~~~~~  325 (351)
                      +++|||..
T Consensus       314 ll~hp~f~  321 (362)
T 3pg1_A          314 ALRHPYFE  321 (362)
T ss_dssp             HHTSGGGT
T ss_pred             HHcCchhh
Confidence            99998754

>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major}

Probab=100.00  E-value=7.3e-42  Score=313.55  Aligned_cols=256  Identities=17%  Similarity=0.186  Sum_probs=179.2

Q ss_pred             CeeEEEEEEeeccCceEEEEEEecCCCCceEEEEecCCCCChHHHHHHHHHhhhccccccccccceeeeccc-------C
Q 018699           47 GKKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFPWEFYMYRQLDQRISGRERSSFGFAHRIHLYS-------D  119 (351)
Q Consensus        47 ~~~Y~i~~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~  119 (351)
                      .++|++.+.||+|+||+||+|+ +..+|+.||||++............ ....+....|++++.+..++...       .
T Consensus        22 ~~~y~~~~~lg~G~~g~V~~~~-~~~~~~~vavK~~~~~~~~~~~~~~-~~~~l~~l~h~niv~~~~~~~~~~~~~~~~~   99 (360)
T 3e3p_A           22 MDRFQVERMAGQGTFGTVQLGK-EKSTGMSVAIKKVIQDPRFRNRELQ-IMQDLAVLHHPNIVQLQSYFYTLGERDRRDI   99 (360)
T ss_dssp             HTTEEEC----------CEEEE-ETTTCCEEEEEEEECCTTCCCHHHH-HHHHHHHHCCTTBCCEEEEEEEECSSCTTCE
T ss_pred             ccceEEEEEEecCCCeEEEEEE-ECCCCCEEEEEEEecCccccHHHHH-HHHHHHhcCCCCcccHHHhhhccccccccce
Confidence            4689999999999999999999 5677899999987654322111111 12222334677888877766432       2


Q ss_pred             eeEEEEEecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHH--HCCceecCCCCCcEEEeecCCcceeeccCC
Q 018699          120 YSILVCDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLH--DVGIIHGDFKPDNLLIRYARDELTVLDHDR  197 (351)
Q Consensus       120 ~~~lv~e~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH--~~~i~H~dl~p~Nill~~~~~~~~~~~~~~  197 (351)
                      +.++||||+++ +|...+.........+++..++.++.|++.|+.|||  ++||+||||||+||+++.            
T Consensus       100 ~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~~~ivH~Dlkp~NIll~~------------  166 (360)
T 3e3p_A          100 YLNVVMEYVPD-TLHRCCRNYYRRQVAPPPILIKVFLFQLIRSIGCLHLPSVNVCHRDIKPHNVLVNE------------  166 (360)
T ss_dssp             EEEEEEECCSC-BHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHTSTTTCCBCSCCCGGGEEEET------------
T ss_pred             eEEEEeecccc-cHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhCCCCCeecCcCCHHHEEEeC------------
Confidence            37899999954 776666554433678899999999999999999999  999999999999999982            


Q ss_pred             CCCcccCCeEEeecCCccccccCCCCccccccccCCCcccceeccCC-CCCccchHhHHHHHHHHHHhCccccccccCCC
Q 018699          198 SGPWQDQGLCLVDWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQEKK-PWKFQVDTYGLCAIVHMMLHNSYMEIEKKASP  276 (351)
Q Consensus       198 ~~~~~~~~~~l~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~-~~~~~~DiwslG~il~~l~~g~~p~~~~~~~~  276 (351)
                          .++.++|+|||++.....   ........||+.|+|||++.+. .++.++|||||||++|+|++|..||.......
T Consensus       167 ----~~~~~kl~Dfg~a~~~~~---~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~  239 (360)
T 3e3p_A          167 ----ADGTLKLCDFGSAKKLSP---SEPNVAYICSRYYRAPELIFGNQHYTTAVDIWSVGCIFAEMMLGEPIFRGDNSAG  239 (360)
T ss_dssp             ----TTTEEEECCCTTCBCCCT---TSCCCSTTSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH
T ss_pred             ----CCCcEEEeeCCCceecCC---CCCcccccCCcceeCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCcCCCChHH
Confidence                256799999999865432   2233455789999999998664 48999999999999999999999996543210


Q ss_pred             CCc-----------------------e--eeecCcchhhh-------hHHHHHHHHHHHHhcCCCCCChHHHHHHHHHHH
Q 018699          277 DGG-----------------------L--VYLPKLSFKRY-------WKVELWKSLFTNLLNMSSGNDKEVLQNLQKSFQ  324 (351)
Q Consensus       277 ~~~-----------------------~--~~~~~~~~~~~-------~~~~~~~~li~~~L~~dP~~R~s~~e~l~~~~~  324 (351)
                      ...                       .  ......+....       .+ +.+.+||.+||++||.+|||+.|+|+|||.
T Consensus       240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~li~~~L~~dP~~Rpt~~e~l~hp~f  318 (360)
T 3e3p_A          240 QLHEIVRVLGCPSREVLRKLNPSHTDVDLYNSKGIPWSNVFSDHSLKDA-KEAYDLLSALLQYLPEERMKPYEALCHPYF  318 (360)
T ss_dssp             HHHHHHHHHCCCCHHHHHHHCTTCCCGGGGCCCCCCHHHHTTTCCCTTH-HHHHHHHHHHTCSSGGGSCCHHHHTTSGGG
T ss_pred             HHHHHHHHcCCCCHHHHHhcccchhhccccccccCCcccccchhhcccc-HHHHHHHHHHhccCccccCCHHHHhcCccc
Confidence            000                       0  00000011111       22 689999999999999999999999999875


Q ss_pred             H
Q 018699          325 D  325 (351)
Q Consensus       325 ~  325 (351)
                      .
T Consensus       319 ~  319 (360)
T 3e3p_A          319 D  319 (360)
T ss_dssp             G
T ss_pred             c
Confidence            4

>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A*

Probab=100.00  E-value=5.6e-41  Score=306.84  Aligned_cols=254  Identities=16%  Similarity=0.199  Sum_probs=190.0

Q ss_pred             CeeEEEEEEeeccCceEEEEEEecCCCCceEEEEecCCCCChHH-HHHHHHHhhhccccccccccceeeecc-----cCe
Q 018699           47 GKKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFPWEF-YMYRQLDQRISGRERSSFGFAHRIHLY-----SDY  120 (351)
Q Consensus        47 ~~~Y~i~~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~~~e~-~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~  120 (351)
                      .++|++.+.||+|+||+||+|. +..+|+.||||++........ .........+....|++++.+..+...     ...
T Consensus        10 ~~~y~~~~~lg~G~~g~V~~~~-~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~   88 (353)
T 2b9h_A           10 SSDFQLKSLLGEGAYGVVCSAT-HKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHENIITIFNIQRPDSFENFNE   88 (353)
T ss_dssp             CTTEEEEEEEEECSSEEEEEEE-ETTTTEEEEEEEECCCSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCSTTCCC
T ss_pred             ccceEEeeEEcCCCCeEEEEEE-ECCCCcEEEEEeecccccchHHHHHHHHHHHHHhCcCCCcCCeeeeecccccCccce
Confidence            5789999999999999999999 567889999999875433221 111122223344567788877766543     267


Q ss_pred             eEEEEEecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeeccCCCCC
Q 018699          121 SILVCDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSGP  200 (351)
Q Consensus       121 ~~lv~e~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~~~~~  200 (351)
                      .++||||+. ++|.+++..     ..+++..++.++.|++.||.|||++||+||||||+||+++                
T Consensus        89 ~~lv~e~~~-~~L~~~~~~-----~~~~~~~~~~~~~qi~~~L~~LH~~~ivH~Dlkp~Nil~~----------------  146 (353)
T 2b9h_A           89 VYIIQELMQ-TDLHRVIST-----QMLSDDHIQYFIYQTLRAVKVLHGSNVIHRDLKPSNLLIN----------------  146 (353)
T ss_dssp             EEEEECCCS-EEHHHHHHH-----CCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEEC----------------
T ss_pred             EEEEEeccC-ccHHHHHhh-----cCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEEc----------------
Confidence            899999995 699998876     4789999999999999999999999999999999999999                


Q ss_pred             cccCCeEEeecCCccccccCCCC--------ccccccccCCCcccceeccC-CCCCccchHhHHHHHHHHHHhCcccccc
Q 018699          201 WQDQGLCLVDWGRGIDLHLFPDN--------MEFEGDCRTSGFRCIEMQEK-KPWKFQVDTYGLCAIVHMMLHNSYMEIE  271 (351)
Q Consensus       201 ~~~~~~~l~Dfg~a~~~~~~~~~--------~~~~~~~g~~~y~aPE~~~~-~~~~~~~DiwslG~il~~l~~g~~p~~~  271 (351)
                       .++.++|+|||++.........        .......||+.|+|||++.+ ..++.++|||||||++|+|++|..||..
T Consensus       147 -~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~  225 (353)
T 2b9h_A          147 -SNCDLKVCDFGLARIIDESAADNSEPTGQQSGMVEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPG  225 (353)
T ss_dssp             -TTCCEEECCCTTCEECC----------------CCCCCCGGGCCHHHHHSCCCCCHHHHHHHHHHHHHHHHHSSCSCCC
T ss_pred             -CCCcEEEEecccccccccccccccCccccccchhhccccccccCCeeeccCCCccchhhHHHHHHHHHHHHhCCCCCCC
Confidence             7788999999998754321111        11233578999999998754 6789999999999999999999999865


Q ss_pred             ccCCC----------------CCc-------------eeeecCcchh---hhhHHHHHHHHHHHHhcCCCCCChHHHHHH
Q 018699          272 KKASP----------------DGG-------------LVYLPKLSFK---RYWKVELWKSLFTNLLNMSSGNDKEVLQNL  319 (351)
Q Consensus       272 ~~~~~----------------~~~-------------~~~~~~~~~~---~~~~~~~~~~li~~~L~~dP~~R~s~~e~l  319 (351)
                      .....                ...             ....+.....   ...+ +.+.+||.+||..||++||++.|++
T Consensus       226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~li~~~L~~dP~~Rpt~~ell  304 (353)
T 2b9h_A          226 RDYRHQLLLIFGIIGTPHSDNDLRCIESPRAREYIKSLPMYPAAPLEKMFPRVN-PKGIDLLQRMLVFDPAKRITAKEAL  304 (353)
T ss_dssp             SSHHHHHHHHHHHHCCCCSTTTTTTCCCHHHHHHHHTSCCCCCCCHHHHSTTSC-HHHHHHHHHHSCSSGGGSCCHHHHH
T ss_pred             CCcHHHHHHHHHHhCCCchhccccccccchhhHHhhcccCCCCcchhhhcccCC-HHHHHHHHHhcCcCcccCCCHHHHh
Confidence            43100                000             0000011111   1233 7889999999999999999999999


Q ss_pred             HHHHHH
Q 018699          320 QKSFQD  325 (351)
Q Consensus       320 ~~~~~~  325 (351)
                      +|||..
T Consensus       305 ~hp~~~  310 (353)
T 2b9h_A          305 EHPYLQ  310 (353)
T ss_dssp             TSGGGT
T ss_pred             cCcccc
Confidence            998743

>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens}

Probab=100.00  E-value=1.2e-41  Score=306.73  Aligned_cols=255  Identities=17%  Similarity=0.182  Sum_probs=186.2

Q ss_pred             CeeEEEEEEeeccCceEEEEEEecCCCCceEEEEecCCCCChHHHHHHHHHhhhccccccccccceeee-----------
Q 018699           47 GKKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFPWEFYMYRQLDQRISGRERSSFGFAHRIH-----------  115 (351)
Q Consensus        47 ~~~Y~i~~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~-----------  115 (351)
                      +++|++.+.||+|+||+||+|. +..+++.||+|++..........+...........|++++....+.           
T Consensus        10 ~~~y~~~~~lg~G~~g~V~~~~-~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~   88 (320)
T 2i6l_A           10 GSRYMDLKPLGCGGNGLVFSAV-DNDCDKRVAIKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVFEILGPSGSQLTDDV   88 (320)
T ss_dssp             TTTEEEEEECC-----CEEEEE-ETTTTEEEEEEEEECCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEECTTSCBCCC--
T ss_pred             CCceeEEEEeccCCCeEEEEEE-ECCCCeEEEEEEEecCChHHHHHHHHHHHHHHhcCCCCeeEEEEecccccccccccc
Confidence            6899999999999999999999 5677899999998765433333333333334455678887776654           


Q ss_pred             ---cccCeeEEEEEecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCccee
Q 018699          116 ---LYSDYSILVCDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTV  192 (351)
Q Consensus       116 ---~~~~~~~lv~e~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~  192 (351)
                         ...+..++||||+. ++|.+++..     ..+++..++.++.|++.||+|||++||+|+||||+||+++.       
T Consensus        89 ~~~~~~~~~~lv~e~~~-~~L~~~~~~-----~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~-------  155 (320)
T 2i6l_A           89 GSLTELNSVYIVQEYME-TDLANVLEQ-----GPLLEEHARLFMYQLLRGLKYIHSANVLHRDLKPANLFINT-------  155 (320)
T ss_dssp             --CCSCSEEEEEEECCS-EEHHHHHTT-----CCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCSGGGEEEET-------
T ss_pred             ccccccCceeEEeeccC-CCHHHHhhc-----CCccHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEcC-------
Confidence               23467899999996 699998864     57899999999999999999999999999999999999973       


Q ss_pred             eccCCCCCcccCCeEEeecCCccccccCCC-CccccccccCCCcccceeccC-CCCCccchHhHHHHHHHHHHhCccccc
Q 018699          193 LDHDRSGPWQDQGLCLVDWGRGIDLHLFPD-NMEFEGDCRTSGFRCIEMQEK-KPWKFQVDTYGLCAIVHMMLHNSYMEI  270 (351)
Q Consensus       193 ~~~~~~~~~~~~~~~l~Dfg~a~~~~~~~~-~~~~~~~~g~~~y~aPE~~~~-~~~~~~~DiwslG~il~~l~~g~~p~~  270 (351)
                               .++.++|+|||++........ ........+++.|+|||.+.+ ..++.++|||||||++|+|++|..||.
T Consensus       156 ---------~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~  226 (320)
T 2i6l_A          156 ---------EDLVLKIGDFGLARIMDPHYSHKGHLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKTLFA  226 (320)
T ss_dssp             ---------TTTEEEECCCTTCBCC--------CCCGGGSCCTTCCHHHHHCTTCCCHHHHHHHHHHHHHHHHHSSCSSC
T ss_pred             ---------CCCeEEEccCccccccCCCcccccccccccccccccCcHHhcCcccCCchhhhHhHHHHHHHHHhCCCCCC
Confidence                     245699999999875432111 122334467899999998865 678899999999999999999999997


Q ss_pred             cccCCCCCceee---------------------------ecCcc---hhhhhHHHHHHHHHHHHhcCCCCCChHHHHHHH
Q 018699          271 EKKASPDGGLVY---------------------------LPKLS---FKRYWKVELWKSLFTNLLNMSSGNDKEVLQNLQ  320 (351)
Q Consensus       271 ~~~~~~~~~~~~---------------------------~~~~~---~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~  320 (351)
                      ............                           .+..+   .....+ ..+.+||.+||+.||++||++.|+++
T Consensus       227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~li~~~L~~dP~~Rpt~~ell~  305 (320)
T 2i6l_A          227 GAHELEQMQLILESIPVVHEEDRQELLSVIPVYIRNDMTEPHKPLTQLLPGIS-REAVDFLEQILTFSPMDRLTAEEALS  305 (320)
T ss_dssp             CSSHHHHHHHHHHHSCCCCHHHHHHHHTTSCHHHHHHTTSCCCCHHHHSTTCC-HHHHHHHHTTSCSSGGGSCCHHHHHT
T ss_pred             CCCHHHHHHHHHHhcCCCchhhhhhhhhcCcccccccccCCCCChhHhcchhh-HHHHHHHHHHcCCCccccCCHHHHhC
Confidence            543210000000                           00001   111223 78999999999999999999999999


Q ss_pred             HHHHH
Q 018699          321 KSFQD  325 (351)
Q Consensus       321 ~~~~~  325 (351)
                      |||..
T Consensus       306 hp~~~  310 (320)
T 2i6l_A          306 HPYMS  310 (320)
T ss_dssp             SHHHH
T ss_pred             Ccccc
Confidence            99865

>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7

Probab=100.00  E-value=2.1e-41  Score=301.05  Aligned_cols=260  Identities=11%  Similarity=0.037  Sum_probs=196.1

Q ss_pred             EEEcCeeEEEEE-EeeccCceEEEEEEe-cCCCCceEEEEecCCCCCh-HHHHHHHHHhhhccccccccccceeeecccC
Q 018699           43 IEIGGKKYQIKG-CAGQGGFAKVFKAYV-NGDPEDVVALKIQKPAFPW-EFYMYRQLDQRISGRERSSFGFAHRIHLYSD  119 (351)
Q Consensus        43 ~~i~~~~Y~i~~-~lg~G~~g~V~~a~~-~~~~~~~vaiK~~~~~~~~-e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  119 (351)
                      +.+..++|.+.. .||+|+||+||+|.+ ...+++.||+|++...... ....+...........+++++.+..+. ..+
T Consensus         4 ~~~~~~~~~i~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~-~~~   82 (287)
T 1u59_A            4 LFLKRDNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVC-QAE   82 (287)
T ss_dssp             CBCCGGGEEEEEEEEECCTTEEEEEEEEC---CCEEEEEEEECSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEE-ESS
T ss_pred             ccccHHHhhhhhccccccCceeEEEeEeccCCCcceEEEEecCCccchhHHHHHHHHHHHHHhCCCCCEeEEEEEe-cCC
Confidence            455667888887 999999999999985 2346788999999875432 222222223334445688888888777 456


Q ss_pred             eeEEEEEecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeeccCCCC
Q 018699          120 YSILVCDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSG  199 (351)
Q Consensus       120 ~~~lv~e~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~~~~  199 (351)
                      ..++||||+++++|.+++...   +..+++..++.++.|++.||.|||++||+|+||+|+||+++               
T Consensus        83 ~~~lv~e~~~~~~L~~~l~~~---~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nili~---------------  144 (287)
T 1u59_A           83 ALMLVMEMAGGGPLHKFLVGK---REEIPVSNVAELLHQVSMGMKYLEEKNFVHRDLAARNVLLV---------------  144 (287)
T ss_dssp             SEEEEEECCTTEEHHHHHTTC---TTTSCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEE---------------
T ss_pred             CcEEEEEeCCCCCHHHHHHhC---CccCCHHHHHHHHHHHHHHHHHHHHCCEeeCCCchheEEEc---------------
Confidence            689999999999999998653   45799999999999999999999999999999999999999               


Q ss_pred             CcccCCeEEeecCCccccccCCCC-ccccccccCCCcccceeccCCCCCccchHhHHHHHHHHHHh-CccccccccCCCC
Q 018699          200 PWQDQGLCLVDWGRGIDLHLFPDN-MEFEGDCRTSGFRCIEMQEKKPWKFQVDTYGLCAIVHMMLH-NSYMEIEKKASPD  277 (351)
Q Consensus       200 ~~~~~~~~l~Dfg~a~~~~~~~~~-~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~-g~~p~~~~~~~~~  277 (351)
                        .++.++|+|||++......... .......+++.|+|||++.+..++.++||||||+++|+|++ |..||........
T Consensus       145 --~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~  222 (287)
T 1u59_A          145 --NRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEV  222 (287)
T ss_dssp             --ETTEEEECCCTTCEECTTCSCEECCCCSSCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCTHHH
T ss_pred             --CCCCEEECcccceeeeccCcceeeccccccccccccCHHHhccCCCCchhhHHHHHHHHHHHHcCCCCCcccCCHHHH
Confidence              6777999999998754321111 11223346788999999988888999999999999999998 9999975432210


Q ss_pred             Ccee-eecCcchhhhhHHHHHHHHHHHHhcCCCCCChHHHHHHHHHHH
Q 018699          278 GGLV-YLPKLSFKRYWKVELWKSLFTNLLNMSSGNDKEVLQNLQKSFQ  324 (351)
Q Consensus       278 ~~~~-~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~~~~~  324 (351)
                      .... .......+..++ +.+.++|.+||+.||++||++.+++.+...
T Consensus       223 ~~~i~~~~~~~~~~~~~-~~l~~li~~~l~~~p~~Rps~~~l~~~l~~  269 (287)
T 1u59_A          223 MAFIEQGKRMECPPECP-PELYALMSDCWIYKWEDRPDFLTVEQRMRA  269 (287)
T ss_dssp             HHHHHTTCCCCCCTTCC-HHHHHHHHHTTCSSGGGSCCHHHHHHHHHH
T ss_pred             HHHHhcCCcCCCCCCcC-HHHHHHHHHHcCCChhhCcCHHHHHHHHHH
Confidence            0000 011122333444 889999999999999999999999987543

>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A*

Probab=100.00  E-value=4.8e-42  Score=310.85  Aligned_cols=265  Identities=13%  Similarity=0.069  Sum_probs=194.3

Q ss_pred             EEcCeeEEEEEEeeccCceEEEEEEe----cCCCCceEEEEecCCCCChH-HHHHHHHHhhhccccccccccceeeeccc
Q 018699           44 EIGGKKYQIKGCAGQGGFAKVFKAYV----NGDPEDVVALKIQKPAFPWE-FYMYRQLDQRISGRERSSFGFAHRIHLYS  118 (351)
Q Consensus        44 ~i~~~~Y~i~~~lg~G~~g~V~~a~~----~~~~~~~vaiK~~~~~~~~e-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  118 (351)
                      .+..++|++.+.||+|+||+||+|++    +..+++.||+|++....... ...+...........|++++.+..+....
T Consensus        26 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~  105 (327)
T 2yfx_A           26 EVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQS  105 (327)
T ss_dssp             BCCGGGCEEEEECC--CSSCEEEEEC--------CCEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSS
T ss_pred             cCChhheEEEEEEcCCCCeeEEEEEEcCCCCCCccceEEEEEeccccchhhHHHHHHHHHHHhhCCCCCCCeEEEEEcCC
Confidence            45678999999999999999999985    23567899999987543322 11122222233445788999988888888


Q ss_pred             CeeEEEEEecCCCCHHHHHHHHHhh---CCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeecc
Q 018699          119 DYSILVCDYLSQGTLQDAINSYVVI---GKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDH  195 (351)
Q Consensus       119 ~~~~lv~e~~~~~sL~~~l~~~~~~---~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~  195 (351)
                      +..|+||||+++++|.+++......   ...+++..++.++.|++.||.|||++||+|+||+|+||+++.++        
T Consensus       106 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~i~H~dlkp~NIli~~~~--------  177 (327)
T 2yfx_A          106 LPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPG--------  177 (327)
T ss_dssp             SSCEEEEECCTTEEHHHHHHHTSCCSSSTTSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESCSS--------
T ss_pred             CCcEEEEecCCCCcHHHHHHhhcccccccccccHHHHHHHHHHHHHHHHHHhhCCeecCcCCHhHEEEecCC--------
Confidence            8899999999999999999874210   13488999999999999999999999999999999999998432        


Q ss_pred             CCCCCcccCCeEEeecCCccccccCCCCccccccccCCCcccceeccCCCCCccchHhHHHHHHHHHHh-CccccccccC
Q 018699          196 DRSGPWQDQGLCLVDWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQEKKPWKFQVDTYGLCAIVHMMLH-NSYMEIEKKA  274 (351)
Q Consensus       196 ~~~~~~~~~~~~l~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~-g~~p~~~~~~  274 (351)
                            ....++|+|||++................+++.|+|||++.+..++.++|||||||++|+|++ |..||.....
T Consensus       178 ------~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~  251 (327)
T 2yfx_A          178 ------PGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSN  251 (327)
T ss_dssp             ------TTCCEEECCCHHHHHHHC------CCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCH
T ss_pred             ------CcceEEECccccccccccccccccCCCcCCCcceeCHhHhcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCcCH
Confidence                  244699999998864332222222334567889999999988889999999999999999998 8889865332


Q ss_pred             CCCCcee-eecCcchhhhhHHHHHHHHHHHHhcCCCCCChHHHHHHHHHH
Q 018699          275 SPDGGLV-YLPKLSFKRYWKVELWKSLFTNLLNMSSGNDKEVLQNLQKSF  323 (351)
Q Consensus       275 ~~~~~~~-~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~~~~  323 (351)
                      ....... .......+..++ +.+.+||.+||+.||.+||++.+++.+.+
T Consensus       252 ~~~~~~~~~~~~~~~~~~~~-~~l~~li~~~l~~dp~~Rps~~~ll~~l~  300 (327)
T 2yfx_A          252 QEVLEFVTSGGRMDPPKNCP-GPVYRIMTQCWQHQPEDRPNFAIILERIE  300 (327)
T ss_dssp             HHHHHHHHTTCCCCCCTTCC-HHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred             HHHHHHHhcCCCCCCCCCCC-HHHHHHHHHHhcCChhhCcCHHHHHHHHH
Confidence            1000000 001111222334 78999999999999999999999999865

>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X*

Probab=100.00  E-value=1.9e-42  Score=316.02  Aligned_cols=252  Identities=15%  Similarity=0.163  Sum_probs=194.7

Q ss_pred             CeeEEEEEEeeccCceEEEEEEecCCCCceEEEEecCCCCChH-----------------HHHHHHHHhhhccccccccc
Q 018699           47 GKKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFPWE-----------------FYMYRQLDQRISGRERSSFG  109 (351)
Q Consensus        47 ~~~Y~i~~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~~~e-----------------~~~~~~~~~~~~~~~~~~~~  109 (351)
                      .++|++.+.||+|+||+||+|.+   +++.||+|++.......                 ...+......+....|++++
T Consensus        30 ~~~y~~~~~lg~G~~g~V~~~~~---~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~  106 (348)
T 2pml_X           30 INDYRIIRTLNQGKFNKIILCEK---DNKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDDFKNELQIITDIKNEYCL  106 (348)
T ss_dssp             ETTEEEEEEEECCSSCCEEEEEE---TTEEEEEEEEEHHHHSSCEEECCCSSSSCCEEEHHHHHHHHHHHHTTCCCTTBC
T ss_pred             cCceEEEEEEcCCCCeEEEEEEc---CCceEEEEEeecccccchhhhccccchhhhHHhHHHHHHHHHHHHHhCCCCCcc
Confidence            35899999999999999999994   78999999976321100                 02223333334455688999


Q ss_pred             cceeeecccCeeEEEEEecCCCCHHHH------HHHHHhhCCChhHHHHHHHHHHHHHHHHHHHH-CCceecCCCCCcEE
Q 018699          110 FAHRIHLYSDYSILVCDYLSQGTLQDA------INSYVVIGKSMEEVLCIYYTIEMLCILESLHD-VGIIHGDFKPDNLL  182 (351)
Q Consensus       110 ~~~~~~~~~~~~~lv~e~~~~~sL~~~------l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~-~~i~H~dl~p~Nil  182 (351)
                      .+..+....+..++||||+++++|.++      +....  +..+++..++.++.|++.|+.|||+ +||+|+||+|+||+
T Consensus       107 ~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~l~~~~--~~~~~~~~~~~i~~qi~~~l~~lH~~~~i~H~dl~p~Nil  184 (348)
T 2pml_X          107 TCEGIITNYDEVYIIYEYMENDSILKFDEYFFVLDKNY--TCFIPIQVIKCIIKSVLNSFSYIHNEKNICHRDVKPSNIL  184 (348)
T ss_dssp             CCSEEEESSSEEEEEEECCTTCBSSEESSSEESSCSSS--CCCCCHHHHHHHHHHHHHHHHHHHHTSCEECCCCCGGGEE
T ss_pred             eEEEEEeeCCeEEEEEeccCCCcHHHHHHHhhhhhhcc--ccCCCHHHHHHHHHHHHHHHHHHhccCCEeecCCChHhEE
Confidence            988888888999999999999999988      54311  3578999999999999999999999 99999999999999


Q ss_pred             EeecCCcceeeccCCCCCcccCCeEEeecCCccccccCCCCccccccccCCCcccceeccCC-CCCc-cchHhHHHHHHH
Q 018699          183 IRYARDELTVLDHDRSGPWQDQGLCLVDWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQEKK-PWKF-QVDTYGLCAIVH  260 (351)
Q Consensus       183 l~~~~~~~~~~~~~~~~~~~~~~~~l~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~-~~~~-~~DiwslG~il~  260 (351)
                      ++                 .++.++|+|||.+....    ........|++.|+|||++.+. .++. ++|||||||++|
T Consensus       185 ~~-----------------~~~~~kl~dfg~~~~~~----~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~  243 (348)
T 2pml_X          185 MD-----------------KNGRVKLSDFGESEYMV----DKKIKGSRGTYEFMPPEFFSNESSYNGAKVDIWSLGICLY  243 (348)
T ss_dssp             EC-----------------TTSCEEECCCTTCEECB----TTEECSSCSCGGGCCGGGGSSCCCEEHHHHHHHHHHHHHH
T ss_pred             Ec-----------------CCCcEEEeccccccccc----cccccCCCCCcCccCchhhcCCCCCCcchhhHHHHHHHHH
Confidence            98                 77889999999986532    1234556789999999999877 5665 999999999999


Q ss_pred             HHHhCccccccccCC-------CCCceeeecC-------------cchhhhhHHHHHHHHHHHHhcCCCCCChHHHHHHH
Q 018699          261 MMLHNSYMEIEKKAS-------PDGGLVYLPK-------------LSFKRYWKVELWKSLFTNLLNMSSGNDKEVLQNLQ  320 (351)
Q Consensus       261 ~l~~g~~p~~~~~~~-------~~~~~~~~~~-------------~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~  320 (351)
                      +|++|..||......       ..+.......             ......++ ..+.+||.+||..||.+||++.|+++
T Consensus       244 ~l~~g~~pf~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~l~~li~~~L~~dP~~Rps~~e~l~  322 (348)
T 2pml_X          244 VMFYNVVPFSLKISLVELFNNIRTKNIEYPLDRNHFLYPLTNKKSTCSNNFLS-NEDIDFLKLFLRKNPAERITSEDALK  322 (348)
T ss_dssp             HHHHSSCSSCCSSCSHHHHHHHTSCCCCCCCSSSSSTTTTCC--------CCC-HHHHHHHHHHCCSSGGGSCCHHHHHT
T ss_pred             HHHhCCCCCCCCCcHHHHHHHHhccCcCCccchhhhhccccccccccchhhcC-HHHHHHHHHHccCChhhCCCHHHHhc
Confidence            999999999754431       0011100000             00002233 78999999999999999999999999


Q ss_pred             HHHHH
Q 018699          321 KSFQD  325 (351)
Q Consensus       321 ~~~~~  325 (351)
                      |||..
T Consensus       323 hp~f~  327 (348)
T 2pml_X          323 HEWLA  327 (348)
T ss_dssp             SGGGT
T ss_pred             Ccccc
Confidence            98643

>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens}

Probab=100.00  E-value=1.2e-41  Score=319.08  Aligned_cols=266  Identities=16%  Similarity=0.107  Sum_probs=188.6

Q ss_pred             cceEEEEcCeeEEEEEEeeccCceEEEEEEecCCCCceEEEEecCCCCChHHHHHHHHHhhhccccccccccceeeeccc
Q 018699           39 RNKTIEIGGKKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFPWEFYMYRQLDQRISGRERSSFGFAHRIHLYS  118 (351)
Q Consensus        39 ~~~~~~i~~~~Y~i~~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  118 (351)
                      ....+.+...+|++.+.||+|+||+||...  ..+++.||||++.+...........+...  ...|++++.+.......
T Consensus        15 ~~~~~~i~~~~y~~~~~LG~G~~G~V~~~~--~~~~~~vAvK~~~~~~~~~~~~E~~~l~~--l~~HpnIv~l~~~~~~~   90 (432)
T 3p23_A           15 ETSVVIVGKISFCPKDVLGHGAEGTIVYRG--MFDNRDVAVKRILPECFSFADREVQLLRE--SDEHPNVIRYFCTEKDR   90 (432)
T ss_dssp             ---CEEETTEEEEEEEEEEECGGGCEEEEE--ESSSSEEEEEEECTTTEEECHHHHHHHHH--SCCCTTBCCEEEEEEET
T ss_pred             cCCcEEEccEEEecCCeeecCcCEEEEEEE--EeCCeEEEEEEECHHHHHHHHHHHHHHHh--ccCCCCcCeEEEEEecC
Confidence            345678888999999999999999966433  35678999999876543322222222221  22678888888888888


Q ss_pred             CeeEEEEEecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeeccCCC
Q 018699          119 DYSILVCDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRS  198 (351)
Q Consensus       119 ~~~~lv~e~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~~~  198 (351)
                      +..|+||||+ +++|.+++...   +..+++..++.++.||+.||.|||++||+||||||+||+++.++..         
T Consensus        91 ~~~~lv~E~~-~g~L~~~l~~~---~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlKp~NIll~~~~~~---------  157 (432)
T 3p23_A           91 QFQYIAIELC-AATLQEYVEQK---DFAHLGLEPITLLQQTTSGLAHLHSLNIVHRDLKPHNILISMPNAH---------  157 (432)
T ss_dssp             TEEEEEEECC-SEEHHHHHHSS---SCCCCSSCHHHHHHHHHHHHHHHHHTTCCCCCCSTTSEEECCCBTT---------
T ss_pred             CEEEEEEECC-CCCHHHHHHhc---CCCccchhHHHHHHHHHHHHHHHHHCcCEeCCCCHHHEEEecCCCC---------
Confidence            8999999999 56999999864   3455666678899999999999999999999999999999743321         


Q ss_pred             CCcccCCeEEeecCCccccccCCC-CccccccccCCCcccceecc---CCCCCccchHhHHHHHHHHHHh-Ccccccccc
Q 018699          199 GPWQDQGLCLVDWGRGIDLHLFPD-NMEFEGDCRTSGFRCIEMQE---KKPWKFQVDTYGLCAIVHMMLH-NSYMEIEKK  273 (351)
Q Consensus       199 ~~~~~~~~~l~Dfg~a~~~~~~~~-~~~~~~~~g~~~y~aPE~~~---~~~~~~~~DiwslG~il~~l~~-g~~p~~~~~  273 (351)
                         ....++|+|||++........ ........||+.|+|||++.   +..++.++|||||||++|+|++ |..||....
T Consensus       158 ---~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~t~~~DiwSlG~il~ellt~g~~pf~~~~  234 (432)
T 3p23_A          158 ---GKIKAMISDFGLCKKLAVGRHSFSRRSGVPGTEGWIAPEMLSEDCKENPTYTVDIFSAGCVFYYVISEGSHPFGKSL  234 (432)
T ss_dssp             ---TBCCEEECCTTEEECC------------CCSCTTSCCGGGTSCC---CCCTHHHHHHHHHHHHHHHTTSCBTTBSTT
T ss_pred             ---CceeEEEecccceeeccCCCcceeeccccCCCcCccChhhhhcccccCCCcHHHHHHHHHHHHHHHcCCCCCcchhh
Confidence               344688999999865432111 12234567999999999997   4566789999999999999999 888885432


Q ss_pred             CCCCCce--eeecCcchhhhhHHHHHHHHHHHHhcCCCCCChHHHHHHHHHHH
Q 018699          274 ASPDGGL--VYLPKLSFKRYWKVELWKSLFTNLLNMSSGNDKEVLQNLQKSFQ  324 (351)
Q Consensus       274 ~~~~~~~--~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~~~~~  324 (351)
                      .......  ........+....+..+.+||.+||+.||.+||++.++++|||.
T Consensus       235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~evl~hp~f  287 (432)
T 3p23_A          235 QRQANILLGACSLDCLHPEKHEDVIARELIEKMIAMDPQKRPSAKHVLKHPFF  287 (432)
T ss_dssp             THHHHHHTTCCCCTTSCTTCHHHHHHHHHHHHHSCSSGGGSCCHHHHHTSTTT
T ss_pred             HHHHHHHhccCCccccCccccccHHHHHHHHHHHhCCHhhCCCHHHHHhCccc
Confidence            2100000  00011111111222678999999999999999999999999874

>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A

Probab=100.00  E-value=8e-42  Score=305.42  Aligned_cols=255  Identities=18%  Similarity=0.182  Sum_probs=183.4

Q ss_pred             CeeEEEEEEeeccCceEEEEEEecCCCCceEEEEecCCCCChHHHHHHHHHhhhccccccccccceeeec----------
Q 018699           47 GKKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFPWEFYMYRQLDQRISGRERSSFGFAHRIHL----------  116 (351)
Q Consensus        47 ~~~Y~i~~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~----------  116 (351)
                      .++|++.+.||+|+||+||+|+ +..+++.||||++..... ....+...........|+++......+.          
T Consensus         5 ~~~y~~~~~lg~G~~g~V~~~~-~~~~~~~vaiK~~~~~~~-~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~   82 (303)
T 1zy4_A            5 ASDFEEIAVLGQGAFGQVVKAR-NALDSRYYAIKKIRHTEE-KLSTILSEVMLLASLNHQYVVRYYAAWLERRNFVKPMT   82 (303)
T ss_dssp             HHHEEEEEEEEECSSEEEEEEE-ETTTCCEEEEEEEEEEHH-HHHHHHHHHHHHTTCCCTTBCCEEEEEEECCCCCC---
T ss_pred             cccchhhheeccCCcEEEEEEE-EcCCCeEEEEEEEeccHH-HHHHHHHHHHHHHhcCchHHHHHHHHHHhhcchhhhhc
Confidence            3689999999999999999999 567889999999864321 1122222223344456777777665542          


Q ss_pred             ---ccCeeEEEEEecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceee
Q 018699          117 ---YSDYSILVCDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVL  193 (351)
Q Consensus       117 ---~~~~~~lv~e~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~  193 (351)
                         ..+..|+||||+++++|.+++...   +..+++..++.++.|++.|+.|||++||+|+||+|+||+++         
T Consensus        83 ~~~~~~~~~lv~e~~~~~~L~~~l~~~---~~~~~~~~~~~i~~qi~~~l~~LH~~~i~H~dlkp~Nil~~---------  150 (303)
T 1zy4_A           83 AVKKKSTLFIQMEYCENGTLYDLIHSE---NLNQQRDEYWRLFRQILEALSYIHSQGIIHRDLKPMNIFID---------  150 (303)
T ss_dssp             ---CEEEEEEEEECCCSCBHHHHHHHS---CGGGCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEC---------
T ss_pred             ccccCCceEEEEecCCCCCHHHhhhcc---ccccchHHHHHHHHHHHHHHHHHHhCCeecccCCHHhEEEc---------
Confidence               246789999999999999999864   45688899999999999999999999999999999999998         


Q ss_pred             ccCCCCCcccCCeEEeecCCccccccCC------------CCccccccccCCCcccceeccCC-CCCccchHhHHHHHHH
Q 018699          194 DHDRSGPWQDQGLCLVDWGRGIDLHLFP------------DNMEFEGDCRTSGFRCIEMQEKK-PWKFQVDTYGLCAIVH  260 (351)
Q Consensus       194 ~~~~~~~~~~~~~~l~Dfg~a~~~~~~~------------~~~~~~~~~g~~~y~aPE~~~~~-~~~~~~DiwslG~il~  260 (351)
                              .++.++|+|||++.......            .........|++.|+|||++.+. .++.++|||||||++|
T Consensus       151 --------~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~  222 (303)
T 1zy4_A          151 --------ESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFF  222 (303)
T ss_dssp             --------TTSCEEECCCCCCSCTTC-------------------------CTTSCHHHHTSCSCCCTHHHHHHHHHHHH
T ss_pred             --------CCCCEEEeeCcchhhcccccchhccccccccccccccccCCCcccccCcccccCCCCCcchhhHHHHHHHHH
Confidence                    77889999999986543111            01223445689999999999764 6889999999999999


Q ss_pred             HHHhCccccccccCC----CCCceeeecCcchhhhhHHHHHHHHHHHHhcCCCCCChHHHHHHHHHHHHH
Q 018699          261 MMLHNSYMEIEKKAS----PDGGLVYLPKLSFKRYWKVELWKSLFTNLLNMSSGNDKEVLQNLQKSFQDY  326 (351)
Q Consensus       261 ~l~~g~~p~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~~~~~~~  326 (351)
                      +|+++..+.......    .....  ..+..++...+ +.+.+||.+||..||++||++.++++|||...
T Consensus       223 ~l~~p~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~-~~~~~li~~~l~~dp~~Rps~~~ll~h~~~~~  289 (303)
T 1zy4_A          223 EMIYPFSTGMERVNILKKLRSVSI--EFPPDFDDNKM-KVEKKIIRLLIDHDPNKRPGARTLLNSGWLPV  289 (303)
T ss_dssp             HHHSCCSSHHHHHHHHHHHHSTTC--CCCTTCCTTTS-HHHHHHHHHHTCSSGGGSCCHHHHHHSSCSCC
T ss_pred             HHHhccCCchhHHHHHHhcccccc--ccCccccccch-HHHHHHHHHHHhcCcccCcCHHHHhCCCCcCC
Confidence            999843221111000    00000  11111222223 67899999999999999999999999987543

>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens}

Probab=100.00  E-value=1.5e-41  Score=305.57  Aligned_cols=249  Identities=18%  Similarity=0.193  Sum_probs=188.1

Q ss_pred             eEEEEcCeeEEEEEEeeccCceEEEEEEecCCCCceEEEEecCCCCC-------------hHHHHHHHHHhhhccccccc
Q 018699           41 KTIEIGGKKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFP-------------WEFYMYRQLDQRISGRERSS  107 (351)
Q Consensus        41 ~~~~i~~~~Y~i~~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~~-------------~e~~~~~~~~~~~~~~~~~~  107 (351)
                      +......++|++.+.||+|+||+||+|+ +..+++.||+|++.....             .|...+..+.   ....|++
T Consensus        24 ~~~~~~~~~y~~~~~lg~G~~g~Vy~~~-~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~---~~~~h~~   99 (312)
T 2iwi_A           24 KDREAFEAEYRLGPLLGKGGFGTVFAGH-RLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVG---AGGGHPG   99 (312)
T ss_dssp             ---------CEEEEEEEEETTEEEEEEE-CTTTCCEEEEEECCSTTTC--------CCCCHHHHHHHHHH---SSCCCSS
T ss_pred             cchhhhhhceEEeeEEEcCCCEEEEEEE-EccCCeEEEEEEEecccccccccchhhHHHHHHHHHHHhhc---ccCCCCC
Confidence            3445557899999999999999999999 567889999999865422             1222222221   1226788


Q ss_pred             cccceeeecccCeeEEEEEe-cCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeec
Q 018699          108 FGFAHRIHLYSDYSILVCDY-LSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYA  186 (351)
Q Consensus       108 ~~~~~~~~~~~~~~~lv~e~-~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~  186 (351)
                      ++....++...+..++|||+ +.+++|.+++...    ..+++..++.++.||+.||.|||++||+|+||+|+||+++. 
T Consensus       100 i~~~~~~~~~~~~~~~v~e~~~~~~~L~~~l~~~----~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~-  174 (312)
T 2iwi_A          100 VIRLLDWFETQEGFMLVLERPLPAQDLFDYITEK----GPLGEGPSRCFFGQVVAAIQHCHSRGVVHRDIKDENILIDL-  174 (312)
T ss_dssp             BCCEEEEC-----CEEEEECCSSEEEHHHHHHHH----CSCCHHHHHHHHHHHHHHHHHHHHHTEECCCCSGGGEEEET-
T ss_pred             eeeEEEEEecCCeEEEEEEecCCCCCHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCChhhEEEeC-
Confidence            88888888888889999999 7899999999873    57999999999999999999999999999999999999983 


Q ss_pred             CCcceeeccCCCCCcccCCeEEeecCCccccccCCCCccccccccCCCcccceeccCCCCC-ccchHhHHHHHHHHHHhC
Q 018699          187 RDELTVLDHDRSGPWQDQGLCLVDWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQEKKPWK-FQVDTYGLCAIVHMMLHN  265 (351)
Q Consensus       187 ~~~~~~~~~~~~~~~~~~~~~l~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~-~~~DiwslG~il~~l~~g  265 (351)
                                     .++.++|+|||++....    ........|++.|+|||++.+..+. .++|||||||++|+|++|
T Consensus       175 ---------------~~~~~kl~dfg~~~~~~----~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g  235 (312)
T 2iwi_A          175 ---------------RRGCAKLIDFGSGALLH----DEPYTDFDGTRVYSPPEWISRHQYHALPATVWSLGILLYDMVCG  235 (312)
T ss_dssp             ---------------TTTEEEECCCSSCEECC----SSCBCCCCSCTTTSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHS
T ss_pred             ---------------CCCeEEEEEcchhhhcc----cCcccccCCcccccCceeeecCCCCCccchHHHHHHHHHHHHHC
Confidence                           34569999999986543    2233456689999999998776654 689999999999999999


Q ss_pred             ccccccccCCCCCceeeecCcchhhhhHHHHHHHHHHHHhcCCCCCChHHHHHHHHHHH
Q 018699          266 SYMEIEKKASPDGGLVYLPKLSFKRYWKVELWKSLFTNLLNMSSGNDKEVLQNLQKSFQ  324 (351)
Q Consensus       266 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~~~~~  324 (351)
                      ..||........      ....++...+ ..+.+||.+||..||++||++.|+++|+|.
T Consensus       236 ~~pf~~~~~~~~------~~~~~~~~~~-~~~~~li~~~l~~~p~~Rps~~e~l~~~~~  287 (312)
T 2iwi_A          236 DIPFERDQEILE------AELHFPAHVS-PDCCALIRRCLAPKPSSRPSLEEILLDPWM  287 (312)
T ss_dssp             SCSCCSHHHHHH------TCCCCCTTSC-HHHHHHHHHHTCSSTTTSCCHHHHHHSTTT
T ss_pred             CCCCCChHHHhh------hccCCcccCC-HHHHHHHHHHccCChhhCcCHHHHhcChhh
Confidence            999965432211      1122233344 789999999999999999999999999863

>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ...

Probab=100.00  E-value=7.2e-41  Score=299.00  Aligned_cols=254  Identities=10%  Similarity=0.079  Sum_probs=188.5

Q ss_pred             CeeEEEEEEeeccCceEEEEEEecCC--CCceEEEEecCCCCCh-HHHHHHHHHhhhccccccccccceeee-cccCeeE
Q 018699           47 GKKYQIKGCAGQGGFAKVFKAYVNGD--PEDVVALKIQKPAFPW-EFYMYRQLDQRISGRERSSFGFAHRIH-LYSDYSI  122 (351)
Q Consensus        47 ~~~Y~i~~~lg~G~~g~V~~a~~~~~--~~~~vaiK~~~~~~~~-e~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~  122 (351)
                      ..+|++.+.||+|+||+||+|.+...  .+..||+|.+...... ....+...........|++++....+. ..++..+
T Consensus        24 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~  103 (298)
T 3f66_A           24 SLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPL  103 (298)
T ss_dssp             GEEEEEEEEEEEETTEEEEEEEEC-----CEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCCE
T ss_pred             ceehhhcceeeecCCceEEEEEEecCCCceeEEEEEecccCCCHHHHHHHHHHHHHHHhCCCCCEeeeeeEEEcCCCceE
Confidence            46899999999999999999996322  3346899998764432 222222223334455688888888764 4567889


Q ss_pred             EEEEecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeeccCCCCCcc
Q 018699          123 LVCDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSGPWQ  202 (351)
Q Consensus       123 lv~e~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~~~~~~~  202 (351)
                      +||||+++++|.+++...   +..+++..++.++.|++.|+.|||++||+|+||||+||+++                 .
T Consensus       104 ~v~e~~~~~~L~~~l~~~---~~~~~~~~~~~i~~ql~~~l~~lH~~~i~H~dikp~Nil~~-----------------~  163 (298)
T 3f66_A          104 VVLPYMKHGDLRNFIRNE---THNPTVKDLIGFGLQVAKGMKYLASKKFVHRDLAARNCMLD-----------------E  163 (298)
T ss_dssp             EEEECCTTCBHHHHHHCT---TCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEC-----------------T
T ss_pred             EEEeCCCCCCHHHHHHhc---ccCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCchheEEEC-----------------C
Confidence            999999999999999764   46789999999999999999999999999999999999998                 7


Q ss_pred             cCCeEEeecCCccccccCC--CCccccccccCCCcccceeccCCCCCccchHhHHHHHHHHHHhC-ccccccccCCCCCc
Q 018699          203 DQGLCLVDWGRGIDLHLFP--DNMEFEGDCRTSGFRCIEMQEKKPWKFQVDTYGLCAIVHMMLHN-SYMEIEKKASPDGG  279 (351)
Q Consensus       203 ~~~~~l~Dfg~a~~~~~~~--~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g-~~p~~~~~~~~~~~  279 (351)
                      ++.++|+|||++.......  .........+++.|+|||.+.+..++.++||||||+++|+|++| .+||..........
T Consensus       164 ~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~~~~~~~~  243 (298)
T 3f66_A          164 KFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITV  243 (298)
T ss_dssp             TCCEEECSCGGGCCCSCGGGCBC-----CCBCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTSCTTTHHH
T ss_pred             CCCEEECcccccccccccchhccccccCCCCCccccChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCccCCHHHHHH
Confidence            7889999999986543211  11122344577889999999988999999999999999999995 55554433221100


Q ss_pred             ee-eecCcchhhhhHHHHHHHHHHHHhcCCCCCChHHHHHHHH
Q 018699          280 LV-YLPKLSFKRYWKVELWKSLFTNLLNMSSGNDKEVLQNLQK  321 (351)
Q Consensus       280 ~~-~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~~  321 (351)
                      .. .......+..++ +.+.++|.+||++||++||++.++++.
T Consensus       244 ~~~~~~~~~~~~~~~-~~l~~li~~~l~~~p~~Rps~~ell~~  285 (298)
T 3f66_A          244 YLLQGRRLLQPEYCP-DPLYEVMLKCWHPKAEMRPSFSELVSR  285 (298)
T ss_dssp             HHHTTCCCCCCTTCC-HHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             HHhcCCCCCCCccCC-HHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence            00 011122233344 789999999999999999999999874

>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens}

Probab=100.00  E-value=1e-40  Score=305.24  Aligned_cols=256  Identities=12%  Similarity=0.104  Sum_probs=187.5

Q ss_pred             EcCeeEEEEEEeeccCceEEEEEEecCC-------CCceEEEEecCCC--CChHHHHHHHHHhhhccc--------cccc
Q 018699           45 IGGKKYQIKGCAGQGGFAKVFKAYVNGD-------PEDVVALKIQKPA--FPWEFYMYRQLDQRISGR--------ERSS  107 (351)
Q Consensus        45 i~~~~Y~i~~~lg~G~~g~V~~a~~~~~-------~~~~vaiK~~~~~--~~~e~~~~~~~~~~~~~~--------~~~~  107 (351)
                      ..+++|++.+.||+|+||+||+|++...       .++.||+|++...  ...|...++.+.+.....        ....
T Consensus        39 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~t~~~~~~~~~~~vavK~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~  118 (352)
T 2jii_A           39 KSGRQWKLKSFQTRDNQGILYEAAPTSTLTCDSGPQKQKFSLKLDAKDGRLFNEQNFFQRAAKPLQVNKWKKLYSTPLLA  118 (352)
T ss_dssp             TTSCEEEEEEEEEEETTEEEEEEEECC-----------CEEEEEEETTSTHHHHHHHHHHHCCHHHHHHHHHHTTCTTCS
T ss_pred             ccCCeEEEEEEecCCCCeEEEEEeecCCccccccccCceEEEEEecccchHHHHHHHHHHhcccchhhhhhhhccCCccC
Confidence            3478999999999999999999995332       4889999998765  234555555554432211        1122


Q ss_pred             cccceeeecc-cCeeEEEEEecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeec
Q 018699          108 FGFAHRIHLY-SDYSILVCDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYA  186 (351)
Q Consensus       108 ~~~~~~~~~~-~~~~~lv~e~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~  186 (351)
                      +.....+... ++..|+||||+ +++|.+++....  +..+++..++.++.||+.||.|||++||+||||||+||+++  
T Consensus       119 i~~~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~--~~~l~~~~~~~i~~qi~~~L~~LH~~~ivH~Dikp~NIl~~--  193 (352)
T 2jii_A          119 IPTCMGFGVHQDKYRFLVLPSL-GRSLQSALDVSP--KHVLSERSVLQVACRLLDALEFLHENEYVHGNVTAENIFVD--  193 (352)
T ss_dssp             CCCCCEEEEETTTEEEEEEECC-CEEHHHHHHHSG--GGCCCHHHHHHHHHHHHHHHHHHHHTTCBCSCCCGGGEEEE--
T ss_pred             ccchhhccccCCcEEEEEecCC-CcCHHHHHHhCC--cCCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCCHHHEEEc--
Confidence            2233344433 67889999999 999999998732  26799999999999999999999999999999999999999  


Q ss_pred             CCcceeeccCCCCCcccC--CeEEeecCCccccccCCCC-----ccccccccCCCcccceeccCCCCCccchHhHHHHHH
Q 018699          187 RDELTVLDHDRSGPWQDQ--GLCLVDWGRGIDLHLFPDN-----MEFEGDCRTSGFRCIEMQEKKPWKFQVDTYGLCAIV  259 (351)
Q Consensus       187 ~~~~~~~~~~~~~~~~~~--~~~l~Dfg~a~~~~~~~~~-----~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il  259 (351)
                                     .++  .++|+|||++.........     .......||+.|+|||++.+..++.++|||||||++
T Consensus       194 ---------------~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il  258 (352)
T 2jii_A          194 ---------------PEDQSQVTLAGYGFAFRYCPSGKHVAYVEGSRSPHEGDLEFISMDLHKGCGPSRRSDLQSLGYCM  258 (352)
T ss_dssp             ---------------TTEEEEEEECCGGGCBCSSGGGCCCCCCTTSSCTTCSCTTTCCHHHHTTCCCCHHHHHHHHHHHH
T ss_pred             ---------------CCCCceEEEecCcceeeccCCCccccccccccccccCCccccCHHHHccCCCCchhhHHHHHHHH
Confidence                           455  7999999998654322111     112344789999999999998999999999999999


Q ss_pred             HHHHhCccccccccCCCCCcee-----eecCcchh------hhhHHHHHHHHHHHHhcCCCCCChHHHHHHHH
Q 018699          260 HMMLHNSYMEIEKKASPDGGLV-----YLPKLSFK------RYWKVELWKSLFTNLLNMSSGNDKEVLQNLQK  321 (351)
Q Consensus       260 ~~l~~g~~p~~~~~~~~~~~~~-----~~~~~~~~------~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~~  321 (351)
                      |+|++|..||............     ......+.      ...+ +.+.+||.+||..||++||++.+++..
T Consensus       259 ~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~l~~li~~~l~~dp~~Rps~~~l~~~  330 (352)
T 2jii_A          259 LKWLYGFLPWTNCLPNTEDIMKQKQKFVDKPGPFVGPCGHWIRPS-ETLQKYLKVVMALTYEEKPPYAMLRNN  330 (352)
T ss_dssp             HHHHHSCCTTGGGTTCHHHHHHHHHHHHHSCCCEECTTSCEECCC-HHHHHHHHHHHTCCTTCCCCHHHHHHH
T ss_pred             HHHHhCCCCcccCCcCHHHHHHHHHhccCChhhhhhhccccCCCc-HHHHHHHHHHHhCChhhCCCHHHHHHH
Confidence            9999999999865422100000     00001111      1123 789999999999999999999988764

>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7

Probab=100.00  E-value=2.6e-40  Score=300.32  Aligned_cols=248  Identities=16%  Similarity=0.165  Sum_probs=184.2

Q ss_pred             CeeEEEEEEeeccCceEEEEEEecCCCCceEEEEecCCCCChHHHHHHHHHhhhccccccccccceeeeccc----CeeE
Q 018699           47 GKKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFPWEFYMYRQLDQRISGRERSSFGFAHRIHLYS----DYSI  122 (351)
Q Consensus        47 ~~~Y~i~~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~  122 (351)
                      .++|++.+.||+|+||+||+|+++   ++.||||++............++.. .....|++++.+.......    ...+
T Consensus        36 ~~~y~~~~~lg~G~~g~V~~~~~~---~~~vavK~~~~~~~~~~~~e~~~~~-~~~~~h~~i~~~~~~~~~~~~~~~~~~  111 (337)
T 3mdy_A           36 AKQIQMVKQIGKGRYGEVWMGKWR---GEKVAVKVFFTTEEASWFRETEIYQ-TVLMRHENILGFIAADIKGTGSWTQLY  111 (337)
T ss_dssp             HHHCEEEEEEEEETTEEEEEEEET---TEEEEEEEEEGGGHHHHHHHHHHHT-STTCCCTTBCCEEEEEEESCGGGCEEE
T ss_pred             ccceEEEeEeecCCCeEEEEEEEC---CceEEEEEEeccccchhhhHHHHHH-HHhhcCCCeeeEEEEEccCCCCCCceE
Confidence            478999999999999999999952   7899999986543222222222221 2234678888877776554    6889


Q ss_pred             EEEEecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHC--------CceecCCCCCcEEEeecCCcceeec
Q 018699          123 LVCDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDV--------GIIHGDFKPDNLLIRYARDELTVLD  194 (351)
Q Consensus       123 lv~e~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~--------~i~H~dl~p~Nill~~~~~~~~~~~  194 (351)
                      +||||+++++|.+++..     ..+++..++.++.|++.||.|||++        ||+||||||+||+++          
T Consensus       112 lv~e~~~~g~L~~~l~~-----~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dikp~Nill~----------  176 (337)
T 3mdy_A          112 LITDYHENGSLYDYLKS-----TTLDAKSMLKLAYSSVSGLCHLHTEIFSTQGKPAIAHRDLKSKNILVK----------  176 (337)
T ss_dssp             EEECCCTTCBHHHHHHH-----CCBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCCEECSCCCGGGEEEC----------
T ss_pred             EEEeccCCCcHHHHhhc-----cCCCHHHHHHHHHHHHHHHHHHHHhhhhhccCCCEEecccchHHEEEC----------
Confidence            99999999999999965     4799999999999999999999999        999999999999999          


Q ss_pred             cCCCCCcccCCeEEeecCCccccccCCCCc--cccccccCCCcccceeccCCCCCcc------chHhHHHHHHHHHHhC-
Q 018699          195 HDRSGPWQDQGLCLVDWGRGIDLHLFPDNM--EFEGDCRTSGFRCIEMQEKKPWKFQ------VDTYGLCAIVHMMLHN-  265 (351)
Q Consensus       195 ~~~~~~~~~~~~~l~Dfg~a~~~~~~~~~~--~~~~~~g~~~y~aPE~~~~~~~~~~------~DiwslG~il~~l~~g-  265 (351)
                             .++.+||+|||++..........  ......||+.|+|||++.+..++..      +|||||||++|+|++| 
T Consensus       177 -------~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~tg~  249 (337)
T 3mdy_A          177 -------KNGTCCIADLGLAVKFISDTNEVDIPPNTRVGTKRYMPPEVLDESLNRNHFQSYIMADMYSFGLILWEVARRC  249 (337)
T ss_dssp             -------TTSCEEECCCTTCEECC---------CCSSCSCGGGCCHHHHTTCCCTTCTHHHHHHHHHHHHHHHHHHHTTB
T ss_pred             -------CCCCEEEEeCCCceeeccccccccCCCCCCccCcceeChhhcccccCCccccCccccchHHHHHHHHHHHhcc
Confidence                   77889999999986543222111  1234578999999999987766654      9999999999999999 


Q ss_pred             ---------ccccccccCCCCCce-------eeecCcchhh-----hhHHHHHHHHHHHHhcCCCCCChHHHHHHHH
Q 018699          266 ---------SYMEIEKKASPDGGL-------VYLPKLSFKR-----YWKVELWKSLFTNLLNMSSGNDKEVLQNLQK  321 (351)
Q Consensus       266 ---------~~p~~~~~~~~~~~~-------~~~~~~~~~~-----~~~~~~~~~li~~~L~~dP~~R~s~~e~l~~  321 (351)
                               ..||...........       ........+.     ... +.+.+||.+||+.||.+||++.+++++
T Consensus       250 ~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~l~~li~~~l~~dP~~Rps~~ell~~  325 (337)
T 3mdy_A          250 VSGGIVEEYQLPYHDLVPSDPSYEDMREIVCIKKLRPSFPNRWSSDECL-RQMGKLMTECWAHNPASRLTALRVKKT  325 (337)
T ss_dssp             CBTTBCCCCCCTTTTTSCSSCCHHHHHHHHTTSCCCCCCCGGGGGSHHH-HHHHHHHHHHSCSSGGGSCCHHHHHHH
T ss_pred             CcccccccccccHhhhcCCCCchhhhHHHHhhhccCccccccchhhHHH-HHHHHHHHHhhhhChhhCCCHHHHHHH
Confidence                     455543222110000       0001111221     233 779999999999999999999999886

>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7

Probab=100.00  E-value=5.8e-41  Score=304.53  Aligned_cols=258  Identities=12%  Similarity=0.093  Sum_probs=191.6

Q ss_pred             EEEcCeeEEEEEEeeccCceEEEEEEecCCC---CceEEEEecCCCCChHH-HHHHHHHhhhccccccccccceeeeccc
Q 018699           43 IEIGGKKYQIKGCAGQGGFAKVFKAYVNGDP---EDVVALKIQKPAFPWEF-YMYRQLDQRISGRERSSFGFAHRIHLYS  118 (351)
Q Consensus        43 ~~i~~~~Y~i~~~lg~G~~g~V~~a~~~~~~---~~~vaiK~~~~~~~~e~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~  118 (351)
                      .++..++|++.+.||+|+||+||+|.+....   +..||+|++........ ..+...........|++++.+..+....
T Consensus        39 ~~i~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~  118 (333)
T 1mqb_A           39 TEIHPSCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRLEGVISKY  118 (333)
T ss_dssp             CBCCTTTEEEEEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSS
T ss_pred             ccCChHHhhcccEEecCCCeEEEEEEEecCCCCccccEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecC
Confidence            3567789999999999999999999864332   34699999876543221 1122222334455788999988888888


Q ss_pred             CeeEEEEEecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeeccCCC
Q 018699          119 DYSILVCDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRS  198 (351)
Q Consensus       119 ~~~~lv~e~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~~~  198 (351)
                      +..++||||+++++|.+++...   +..+++..++.++.|++.||.|||++||+|+||||+||+++              
T Consensus       119 ~~~~lv~e~~~~~~L~~~l~~~---~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIl~~--------------  181 (333)
T 1mqb_A          119 KPMMIITEYMENGALDKFLREK---DGEFSVLQLVGMLRGIAAGMKYLANMNYVHRDLAARNILVN--------------  181 (333)
T ss_dssp             SSEEEEEECCTTEEHHHHHHHT---TTCSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEC--------------
T ss_pred             CCcEEEEeCCCCCcHHHHHHhC---CCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCChheEEEC--------------
Confidence            8999999999999999999764   46799999999999999999999999999999999999999              


Q ss_pred             CCcccCCeEEeecCCccccccCCCC-ccccccccCCCcccceeccCCCCCccchHhHHHHHHHHHHh-CccccccccCCC
Q 018699          199 GPWQDQGLCLVDWGRGIDLHLFPDN-MEFEGDCRTSGFRCIEMQEKKPWKFQVDTYGLCAIVHMMLH-NSYMEIEKKASP  276 (351)
Q Consensus       199 ~~~~~~~~~l~Dfg~a~~~~~~~~~-~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~-g~~p~~~~~~~~  276 (351)
                         .++.++|+|||++......... .......+++.|+|||++.+..++.++|||||||++|+|++ |..||.......
T Consensus       182 ---~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~~~~~  258 (333)
T 1mqb_A          182 ---SNLVCKVSDFGLSRVLEDDPEATYTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWELSNHE  258 (333)
T ss_dssp             ---TTCCEEECCCCC-----------------CCCGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHH
T ss_pred             ---CCCcEEECCCCcchhhccccccccccCCCCccccccCchhcccCCCCchhhhHHHHHHHHHHHcCCCCCcccCCHHH
Confidence               7788999999998654322111 11222345778999999998899999999999999999998 999986433210


Q ss_pred             CCcee-eecCcchhhhhHHHHHHHHHHHHhcCCCCCChHHHHHHHH
Q 018699          277 DGGLV-YLPKLSFKRYWKVELWKSLFTNLLNMSSGNDKEVLQNLQK  321 (351)
Q Consensus       277 ~~~~~-~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~~  321 (351)
                      ..... .....+.+..++ +.+.++|.+||+.||.+||++.+++.+
T Consensus       259 ~~~~~~~~~~~~~~~~~~-~~l~~li~~~l~~~p~~Rps~~~l~~~  303 (333)
T 1mqb_A          259 VMKAINDGFRLPTPMDCP-SAIYQLMMQCWQQERARRPKFADIVSI  303 (333)
T ss_dssp             HHHHHHTTCCCCCCTTCB-HHHHHHHHHHTCSSTTTSCCHHHHHHH
T ss_pred             HHHHHHCCCcCCCcccCC-HHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence            00000 001112222334 789999999999999999999998875

>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens}

Probab=100.00  E-value=5.7e-41  Score=312.62  Aligned_cols=260  Identities=15%  Similarity=0.112  Sum_probs=177.7

Q ss_pred             eeEEE-EEEeeccCceEEEEEEec-CCCCceEEEEecCCCCChHHHHHHHHHhhhccccccccccceeee--cccCeeEE
Q 018699           48 KKYQI-KGCAGQGGFAKVFKAYVN-GDPEDVVALKIQKPAFPWEFYMYRQLDQRISGRERSSFGFAHRIH--LYSDYSIL  123 (351)
Q Consensus        48 ~~Y~i-~~~lg~G~~g~V~~a~~~-~~~~~~vaiK~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~l  123 (351)
                      +.|++ .++||+|+||+||+|++. ..+++.||||++....... ...+++ ..+....|++++.+..++  ......|+
T Consensus        20 ~~y~~~g~~lG~G~~g~Vy~~~~~~~~~~~~vaiK~~~~~~~~~-~~~~E~-~~l~~l~hpniv~~~~~~~~~~~~~~~l   97 (405)
T 3rgf_A           20 DLFEYEGCKVGRGTYGHVYKAKRKDGKDDKDYALKQIEGTGISM-SACREI-ALLRELKHPNVISLQKVFLSHADRKVWL   97 (405)
T ss_dssp             HHEECSSCCCC-----EEEEEEESSSSCCCCEEEEECSSSSCCH-HHHHHH-HHHHHCCCTTBCCCCEEEEETTTTEEEE
T ss_pred             hhhhhcCcEeeecCCeEEEEEEEccCCCCeEEEEEEECCCCCCH-HHHHHH-HHHHhcCCCCeeeEeeEEecCCCCeEEE
Confidence            56777 558999999999999953 2468899999987653322 222222 223334578888888777  34778999


Q ss_pred             EEEecCCCCHHHHHHHHHhh-----CCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeeccCCC
Q 018699          124 VCDYLSQGTLQDAINSYVVI-----GKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRS  198 (351)
Q Consensus       124 v~e~~~~~sL~~~l~~~~~~-----~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~~~  198 (351)
                      ||||+ +++|.+++......     ...+++..++.++.||+.||.|||++||+||||||+||++..++.          
T Consensus        98 v~e~~-~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~ivH~Dlkp~NIll~~~~~----------  166 (405)
T 3rgf_A           98 LFDYA-EHDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEGP----------  166 (405)
T ss_dssp             EEECC-SEEHHHHHHHHHHHC-------CCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECCSST----------
T ss_pred             EEeCC-CCCHHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHhCCEeCCCcCHHHeEEecCCC----------
Confidence            99999 56888888654311     124899999999999999999999999999999999999953322          


Q ss_pred             CCcccCCeEEeecCCccccccCCC-CccccccccCCCcccceeccC-CCCCccchHhHHHHHHHHHHhCccccccccCCC
Q 018699          199 GPWQDQGLCLVDWGRGIDLHLFPD-NMEFEGDCRTSGFRCIEMQEK-KPWKFQVDTYGLCAIVHMMLHNSYMEIEKKASP  276 (351)
Q Consensus       199 ~~~~~~~~~l~Dfg~a~~~~~~~~-~~~~~~~~g~~~y~aPE~~~~-~~~~~~~DiwslG~il~~l~~g~~p~~~~~~~~  276 (351)
                         ..+.++|+|||++........ .......+||+.|+|||++.+ ..++.++|||||||++|+|++|.+||.......
T Consensus       167 ---~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~  243 (405)
T 3rgf_A          167 ---ERGRVKIADMGFARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDI  243 (405)
T ss_dssp             ---TTTCEEECCTTCCC----------------CCCTTCCHHHHTTCCSCCHHHHHHHHHHHHHHHHHSSCTTCCCC---
T ss_pred             ---CCCcEEEEECCCceecCCCCcccccCCCceecCcccCchhhcCCCcccchhhhHHHHHHHHHHHhCCCCCCCccccc
Confidence               567899999999975432111 123345678999999999977 458999999999999999999999996543321


Q ss_pred             CCcee--------------------eecCcchhhh---------------------------hHHHHHHHHHHHHhcCCC
Q 018699          277 DGGLV--------------------YLPKLSFKRY---------------------------WKVELWKSLFTNLLNMSS  309 (351)
Q Consensus       277 ~~~~~--------------------~~~~~~~~~~---------------------------~~~~~~~~li~~~L~~dP  309 (351)
                      .....                    +.....++..                           .+ +.+.+||.+||.+||
T Consensus       244 ~~~~~~~~~~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~Ll~~~L~~dP  322 (405)
T 3rgf_A          244 KTSNPYHHDQLDRIFNVMGFPADKDWEDIKKMPEHSTLMKDFRRNTYTNCSLIKYMEKHKVKPD-SKAFHLLQKLLTMDP  322 (405)
T ss_dssp             ---CCCCHHHHHHHHHHHCCCCTTTCGGGGGSTTHHHHHHHCCGGGGTTCCHHHHHHTTTCCTT-SHHHHHHHHHSCSSG
T ss_pred             cccccchHHHHHHHHHhhCCCChhhcchhhcCcchhhhhhhccccCCCcchhhhhHhhcCCCCC-HHHHHHHHHHccCCc
Confidence            00000                    0000000000                           02 578899999999999


Q ss_pred             CCChHHHHHHHHHHH
Q 018699          310 GNDKEVLQNLQKSFQ  324 (351)
Q Consensus       310 ~~R~s~~e~l~~~~~  324 (351)
                      .+|||+.|+|+|||.
T Consensus       323 ~~R~ta~e~L~hp~f  337 (405)
T 3rgf_A          323 IKRITSEQAMQDPYF  337 (405)
T ss_dssp             GGSCCHHHHHTSGGG
T ss_pred             ccCCCHHHHhcChhh
Confidence            999999999999874

>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}

Probab=100.00  E-value=8.6e-41  Score=311.94  Aligned_cols=251  Identities=14%  Similarity=0.151  Sum_probs=181.7

Q ss_pred             CeeEEEEEEeeccCceEEEEEEecCCCCceEEEEecCCCCChH---HHHHHHHHhhhccccc-c---------cccccee
Q 018699           47 GKKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFPWE---FYMYRQLDQRISGRER-S---------SFGFAHR  113 (351)
Q Consensus        47 ~~~Y~i~~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~~~e---~~~~~~~~~~~~~~~~-~---------~~~~~~~  113 (351)
                      .+.|.+.+.||+|+||+||+|. +..+|+.||||++.......   ...++..........+ .         .+.....
T Consensus        77 ~~~~~~~~~LG~G~fG~Vy~a~-~~~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~~~~~~~~~~~~~~~  155 (413)
T 3dzo_A           77 PRTLVRGTVLGQEDPYAYLEAT-DQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFD  155 (413)
T ss_dssp             CEEEEEEEEEEEETTEEEEEEE-ETTTCCEEEEEEECCSCC----CCHHHHHHHHGGGGSTTCCSHHHHHHHTCBCCCCE
T ss_pred             ceeEEEecccccCCCEEEEEEE-ecCCCCceEEEEEecCCCccHHHHHHHHHHHHHHHhhccCCCHHHHHHhcccccchh
Confidence            3569999999999999999999 57788999999987433222   1111111111111111 0         0000000


Q ss_pred             e------------ecc-----cCeeEEEEEecCCCCHHHHHHHHH---hhCCChhHHHHHHHHHHHHHHHHHHHHCCcee
Q 018699          114 I------------HLY-----SDYSILVCDYLSQGTLQDAINSYV---VIGKSMEEVLCIYYTIEMLCILESLHDVGIIH  173 (351)
Q Consensus       114 ~------------~~~-----~~~~~lv~e~~~~~sL~~~l~~~~---~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H  173 (351)
                      +            ...     ....+++|+++ +++|.+++....   ..+..+++..+..++.||+.||.|||++||+|
T Consensus       156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~L~~ll~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~iiH  234 (413)
T 3dzo_A          156 LVKDPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHYGLVH  234 (413)
T ss_dssp             EEECCC---------------CCSEEEEEECC-SEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHTTEEC
T ss_pred             hcccCCCCccccccCCCccccccceEEEeehh-cCCHHHHHHHhhcccccCCCCCHHHHHHHHHHHHHHHHHHHhCCccc
Confidence            0            000     12357777776 789999986431   12456889999999999999999999999999


Q ss_pred             cCCCCCcEEEeecCCcceeeccCCCCCcccCCeEEeecCCccccccCCCCccccccccCCCcccceec----------cC
Q 018699          174 GDFKPDNLLIRYARDELTVLDHDRSGPWQDQGLCLVDWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQ----------EK  243 (351)
Q Consensus       174 ~dl~p~Nill~~~~~~~~~~~~~~~~~~~~~~~~l~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~----------~~  243 (351)
                      |||||+||+++                 .++.+||+|||++....     ......+| +.|+|||++          .+
T Consensus       235 rDiKp~NILl~-----------------~~~~~kL~DFG~a~~~~-----~~~~~~~g-~~y~aPE~~~~~~~~~~~~~~  291 (413)
T 3dzo_A          235 TYLRPVDIVLD-----------------QRGGVFLTGFEHLVRDG-----ASAVSPIG-RGFAPPETTAERMLPFGQHHP  291 (413)
T ss_dssp             SCCCGGGEEEC-----------------TTCCEEECCGGGCEETT-----EEECCCCC-TTTCCHHHHHHHTSTTGGGCC
T ss_pred             CCcccceEEEe-----------------cCCeEEEEeccceeecC-----CccccCCC-CceeCchhhhccccccccccC
Confidence            99999999999                 77889999999986532     22455577 999999999          55


Q ss_pred             CCCCccchHhHHHHHHHHHHhCccccccccCCCCCceeeecCcchhhhhHHHHHHHHHHHHhcCCCCCChHHHHHHHHHH
Q 018699          244 KPWKFQVDTYGLCAIVHMMLHNSYMEIEKKASPDGGLVYLPKLSFKRYWKVELWKSLFTNLLNMSSGNDKEVLQNLQKSF  323 (351)
Q Consensus       244 ~~~~~~~DiwslG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~~~~  323 (351)
                      ..++.++|||||||++|+|++|..||..................++     +.+.+||.+||+.||++||++.++++|+|
T Consensus       292 ~~~~~~~DvwSlGvil~elltg~~Pf~~~~~~~~~~~~~~~~~~~~-----~~~~~li~~~l~~dP~~Rpt~~~~l~~~~  366 (413)
T 3dzo_A          292 TLMTFAFDTWTLGLAIYWIWCADLPNTDDAALGGSEWIFRSCKNIP-----QPVRALLEGFLRYPKEDRLLPLQAMETPE  366 (413)
T ss_dssp             EEECHHHHHHHHHHHHHHHHHSSCCCCTTGGGSCSGGGGSSCCCCC-----HHHHHHHHHHTCSSGGGSCCHHHHTTSHH
T ss_pred             cCCCchhhHHHHHHHHHHHHHCCCCCCCcchhhhHHHHHhhcccCC-----HHHHHHHHHHccCChhhCcCHHHHHhCHH
Confidence            5678899999999999999999999987655433333333233333     78999999999999999999999999987


Q ss_pred             HHHH
Q 018699          324 QDYL  327 (351)
Q Consensus       324 ~~~~  327 (351)
                      ..-+
T Consensus       367 ~~~~  370 (413)
T 3dzo_A          367 YEQL  370 (413)
T ss_dssp             HHHH
T ss_pred             HHHH
Confidence            5433

>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...

Probab=100.00  E-value=4.4e-41  Score=309.76  Aligned_cols=257  Identities=15%  Similarity=0.133  Sum_probs=186.8

Q ss_pred             EEcCeeEEEEEEeeccCceEEEEEEec--CCCCceEEEEecCCCCChH-HHHHHHHHhhhccccccccccceeeecccCe
Q 018699           44 EIGGKKYQIKGCAGQGGFAKVFKAYVN--GDPEDVVALKIQKPAFPWE-FYMYRQLDQRISGRERSSFGFAHRIHLYSDY  120 (351)
Q Consensus        44 ~i~~~~Y~i~~~lg~G~~g~V~~a~~~--~~~~~~vaiK~~~~~~~~e-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  120 (351)
                      ++..++|++.+.||+|+||+||+|++.  ..++..||||++....... ...+...........|++++.+..++...+.
T Consensus        41 ~~~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~  120 (373)
T 2qol_A           41 ELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKP  120 (373)
T ss_dssp             BCCGGGCCCCEEEEECSSSEEEEC-CBCTTSCBCCEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSS
T ss_pred             hcCHhhceeeeEEeeCCCeEEEEEEEecCCCCceeEEEEEecCccCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCc
Confidence            456689999999999999999999853  2457889999987654322 2222222333455678899999998888889


Q ss_pred             eEEEEEecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeeccCCCCC
Q 018699          121 SILVCDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSGP  200 (351)
Q Consensus       121 ~~lv~e~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~~~~~  200 (351)
                      .++||||+++++|.+++...   +..+++..++.++.||+.||.|||++||+||||||+||+++                
T Consensus       121 ~~lv~e~~~~~sL~~~l~~~---~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~----------------  181 (373)
T 2qol_A          121 VMIVTEYMENGSLDSFLRKH---DAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILIN----------------  181 (373)
T ss_dssp             CEEEEECCTTCBHHHHHHTT---TTCSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEC----------------
T ss_pred             eEEEEeCCCCCcHHHHHHhC---CCCCCHHHHHHHHHHHHHHHHHHHHCCeeCCCCCcceEEEc----------------
Confidence            99999999999999999764   45799999999999999999999999999999999999998                


Q ss_pred             cccCCeEEeecCCccccccCCCC-ccccccccCCCcccceeccCCCCCccchHhHHHHHHHHHHh-CccccccccCCCCC
Q 018699          201 WQDQGLCLVDWGRGIDLHLFPDN-MEFEGDCRTSGFRCIEMQEKKPWKFQVDTYGLCAIVHMMLH-NSYMEIEKKASPDG  278 (351)
Q Consensus       201 ~~~~~~~l~Dfg~a~~~~~~~~~-~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~-g~~p~~~~~~~~~~  278 (351)
                       .++.+||+|||++......... .......+++.|+|||++.+..++.++|||||||++|+|++ |..||.........
T Consensus       182 -~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~SlG~il~ellt~g~~P~~~~~~~~~~  260 (373)
T 2qol_A          182 -SNLVCKVSDFGLGRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVI  260 (373)
T ss_dssp             -TTCCEEECCC----------------------CTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTC-CTTTTCCHHHHH
T ss_pred             -CCCCEEECcCccccccccCCccceeccCCCcCCCccChhhhccCCcCchhcHHHHHHHHHHHHhCCCCCCCCCCHHHHH
Confidence             7788999999998654322111 11122235678999999998899999999999999999997 99998654321000


Q ss_pred             cee-eecCcchhhhhHHHHHHHHHHHHhcCCCCCChHHHHHHHH
Q 018699          279 GLV-YLPKLSFKRYWKVELWKSLFTNLLNMSSGNDKEVLQNLQK  321 (351)
Q Consensus       279 ~~~-~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~~  321 (351)
                      ... .....+.+..++ ..+.+||.+||+.||.+||++.++++.
T Consensus       261 ~~i~~~~~~~~~~~~~-~~l~~li~~cl~~dp~~RPs~~~i~~~  303 (373)
T 2qol_A          261 KAVDEGYRLPPPMDCP-AALYQLMLDCWQKDRNNRPKFEQIVSI  303 (373)
T ss_dssp             HHHHTTEECCCCTTCB-HHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             HHHHcCCCCCCCcccc-HHHHHHHHHHhCcChhhCcCHHHHHHH
Confidence            000 000111122233 789999999999999999999998863

>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A

Probab=100.00  E-value=1.4e-40  Score=313.86  Aligned_cols=249  Identities=13%  Similarity=0.118  Sum_probs=193.1

Q ss_pred             EEEcCeeEEEEEEeeccCceEEEEEEecCCCCceEEEEecCCCCChHHHHHHHHHhhhccccccccccceeeeccc-Cee
Q 018699           43 IEIGGKKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFPWEFYMYRQLDQRISGRERSSFGFAHRIHLYS-DYS  121 (351)
Q Consensus        43 ~~i~~~~Y~i~~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~  121 (351)
                      +.+..++|++.+.||+|+||+||+|.++   ++.||||++......  ..+...........|++++.+..+.... +..
T Consensus       188 ~~i~~~~~~~~~~lG~G~fg~V~~~~~~---~~~vavK~~~~~~~~--~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~  262 (450)
T 1k9a_A          188 WALNMKELKLLQTIGKGEFGDVMLGDYR---GNKVAVKCIKNDATA--QAFLAEASVMTQLRHSNLVQLLGVIVEEKGGL  262 (450)
T ss_dssp             CBCCGGGEEEEEEEEECSSEEEEEEEET---TEEEEEEEESSCTTS--HHHHHHHHHHHTCCCTTBCCEEEEEECTTSCE
T ss_pred             cccChHHeEEEeeecCcCCeeEEEEEec---CCeEEEEEeCCchHH--HHHHHHHHHHHhccCCCEEEEEEEEEcCCCce
Confidence            4567789999999999999999999953   678999998865422  1222222333455688888888776544 478


Q ss_pred             EEEEEecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeeccCCCCCc
Q 018699          122 ILVCDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSGPW  201 (351)
Q Consensus       122 ~lv~e~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~~~~~~  201 (351)
                      |+||||+++|+|.+++....  ...+++..++.++.|++.||.|||++||+||||||+||+++                 
T Consensus       263 ~iv~e~~~~g~L~~~l~~~~--~~~~~~~~~~~~~~qi~~~l~~LH~~~ivHrDlkp~Nill~-----------------  323 (450)
T 1k9a_A          263 YIVTEYMAKGSLVDYLRSRG--RSVLGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAARNVLVS-----------------  323 (450)
T ss_dssp             EEEEECCTTCBHHHHHHHHC--TTTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEEC-----------------
T ss_pred             EEEEEecCCCcHHHHHHhcC--CCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCCHhhEEEC-----------------
Confidence            99999999999999998752  23478999999999999999999999999999999999999                 


Q ss_pred             ccCCeEEeecCCccccccCCCCccccccccCCCcccceeccCCCCCccchHhHHHHHHHHHHh-CccccccccCCCCCce
Q 018699          202 QDQGLCLVDWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQEKKPWKFQVDTYGLCAIVHMMLH-NSYMEIEKKASPDGGL  280 (351)
Q Consensus       202 ~~~~~~l~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~-g~~p~~~~~~~~~~~~  280 (351)
                      .++.+||+|||++.....     ......++..|+|||++.+..++.++|||||||++|+|++ |..||...........
T Consensus       324 ~~~~~kl~DfG~a~~~~~-----~~~~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~~~~~~~  398 (450)
T 1k9a_A          324 EDNVAKVSDFGLTKEASS-----TQDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPR  398 (450)
T ss_dssp             TTSCEEECCCTTCEECC-----------CCCTTTSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTTCCSSTTSCTTTHHHH
T ss_pred             CCCCEEEeeCCCcccccc-----cccCCCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHH
Confidence            778899999999874321     1122356789999999999999999999999999999998 9999976543311100


Q ss_pred             e-eecCcchhhhhHHHHHHHHHHHHhcCCCCCChHHHHHHHH
Q 018699          281 V-YLPKLSFKRYWKVELWKSLFTNLLNMSSGNDKEVLQNLQK  321 (351)
Q Consensus       281 ~-~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~~  321 (351)
                      . .......+..++ +.+.+||.+||..||++||++.+++..
T Consensus       399 i~~~~~~~~p~~~~-~~l~~li~~cl~~dp~~Rpt~~~l~~~  439 (450)
T 1k9a_A          399 VEKGYKMDAPDGCP-PAVYDVMKNCWHLDAATRPTFLQLREQ  439 (450)
T ss_dssp             HHTTCCCCCCTTCC-HHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             HHcCCCCCCCCcCC-HHHHHHHHHHcCCChhHCcCHHHHHHH
Confidence            0 011223334444 889999999999999999999998764

>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A*

Probab=100.00  E-value=4.1e-41  Score=299.68  Aligned_cols=256  Identities=13%  Similarity=0.061  Sum_probs=191.7

Q ss_pred             EEEEcCeeEEEEE-EeeccCceEEEEEEe-cCCCCceEEEEecCCCCChH--HHHHHHHHhhhccccccccccceeeecc
Q 018699           42 TIEIGGKKYQIKG-CAGQGGFAKVFKAYV-NGDPEDVVALKIQKPAFPWE--FYMYRQLDQRISGRERSSFGFAHRIHLY  117 (351)
Q Consensus        42 ~~~i~~~~Y~i~~-~lg~G~~g~V~~a~~-~~~~~~~vaiK~~~~~~~~e--~~~~~~~~~~~~~~~~~~~~~~~~~~~~  117 (351)
                      .+.+..++|++.+ .||+|+||+||+|.+ ...+++.||+|++.......  ...+...........|++++.+..+. .
T Consensus        10 ~~~~~~~~y~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-~   88 (291)
T 1xbb_A           10 EVYLDRKLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGIC-E   88 (291)
T ss_dssp             -CBCCGGGEEEEEEEEEECSSEEEEEEEEECSSSEEEEEEEEEC-----CHHHHHHHHHHHHHHTCCCTTBCCEEEEE-E
T ss_pred             eeeecchhhhhccCccccccCeeeEeeeecCCCceeeEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEE-C
Confidence            4456678999999 999999999999964 35567899999987653221  22222233334455688888888777 5


Q ss_pred             cCeeEEEEEecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeeccCC
Q 018699          118 SDYSILVCDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDR  197 (351)
Q Consensus       118 ~~~~~lv~e~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~~  197 (351)
                      .+..++||||+++++|.+++..    +..+++..++.++.|++.||.|||++||+|+||+|+||+++             
T Consensus        89 ~~~~~lv~e~~~~~~L~~~l~~----~~~~~~~~~~~i~~qi~~~l~~LH~~~i~H~dikp~Nil~~-------------  151 (291)
T 1xbb_A           89 AESWMLVMEMAELGPLNKYLQQ----NRHVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLV-------------  151 (291)
T ss_dssp             SSSEEEEEECCTTEEHHHHHHH----CTTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEE-------------
T ss_pred             CCCcEEEEEeCCCCCHHHHHHh----CcCCCHHHHHHHHHHHHHHHHHHHhCCeEcCCCCcceEEEe-------------
Confidence            6678999999999999999987    56799999999999999999999999999999999999999             


Q ss_pred             CCCcccCCeEEeecCCccccccCCCC-ccccccccCCCcccceeccCCCCCccchHhHHHHHHHHHHh-CccccccccCC
Q 018699          198 SGPWQDQGLCLVDWGRGIDLHLFPDN-MEFEGDCRTSGFRCIEMQEKKPWKFQVDTYGLCAIVHMMLH-NSYMEIEKKAS  275 (351)
Q Consensus       198 ~~~~~~~~~~l~Dfg~a~~~~~~~~~-~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~-g~~p~~~~~~~  275 (351)
                          .++.++|+|||++......... .......+++.|+|||.+.+..++.++||||||+++|+|++ |..||......
T Consensus       152 ----~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~  227 (291)
T 1xbb_A          152 ----TQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGS  227 (291)
T ss_dssp             ----ETTEEEECCCTTCEECCTTCSEEEC----CCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCCSSTTCCHH
T ss_pred             ----CCCcEEEccCCcceeeccCCCcccccccCCCCceeeChHHhccCCCChhhhHHHHHHHHHHHHhcCCCCCCCCCHH
Confidence                6677999999998654322111 11122345688999999988888999999999999999999 99998754321


Q ss_pred             CCCcee-eecCcchhhhhHHHHHHHHHHHHhcCCCCCChHHHHHHH
Q 018699          276 PDGGLV-YLPKLSFKRYWKVELWKSLFTNLLNMSSGNDKEVLQNLQ  320 (351)
Q Consensus       276 ~~~~~~-~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~  320 (351)
                      ...... .......+..++ +.+.++|.+||+.||.+||++.+++.
T Consensus       228 ~~~~~~~~~~~~~~~~~~~-~~l~~li~~~l~~dp~~Rps~~~l~~  272 (291)
T 1xbb_A          228 EVTAMLEKGERMGCPAGCP-REMYDLMNLCWTYDVENRPGFAAVEL  272 (291)
T ss_dssp             HHHHHHHTTCCCCCCTTCC-HHHHHHHHHHTCSSTTTSCCHHHHHH
T ss_pred             HHHHHHHcCCCCCCCCCCC-HHHHHHHHHHcCCChhhCcCHHHHHH
Confidence            000000 011122233344 78999999999999999999998875

>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A

Probab=100.00  E-value=4e-41  Score=321.12  Aligned_cols=278  Identities=12%  Similarity=0.106  Sum_probs=209.9

Q ss_pred             EEEEcCeeEEEEEEeeccCceEEEEEEecCCCCceEEEEecCCCCChHHHHHHHHHhhhccccccccccceeeecccCee
Q 018699           42 TIEIGGKKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFPWEFYMYRQLDQRISGRERSSFGFAHRIHLYSDYS  121 (351)
Q Consensus        42 ~~~i~~~~Y~i~~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  121 (351)
                      .+++...+|++.+.||+|+||+||+|.+ ..++..||||++...........++ ...+....|++++.+..++...+..
T Consensus       214 ~~~~~~~~~~~~~~lG~G~fg~Vy~~~~-~~~~~~vavK~~~~~~~~~~~~~~E-~~~l~~l~hpniv~l~~~~~~~~~~  291 (495)
T 1opk_A          214 KWEMERTDITMKHKLGGGQYGEVYEGVW-KKYSLTVAVKTLKEDTMEVEEFLKE-AAVMKEIKHPNLVQLLGVCTREPPF  291 (495)
T ss_dssp             CCBCCGGGEEEEEESGGGTTSSEEEEEE-GGGTEEEEEEECCSSSSCHHHHHHH-HHHHHHCCCTTBCCEEEEECSSSSC
T ss_pred             ccccCHHHceeeeEecCCCCeEEEEEEE-cCCCeEEEEEEecCcccchHHHHHH-HHHHHhcCCCCEeeEEEEEecCCcE
Confidence            4567778999999999999999999995 5667899999998664433333332 2333445788999999988888899


Q ss_pred             EEEEEecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeeccCCCCCc
Q 018699          122 ILVCDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSGPW  201 (351)
Q Consensus       122 ~lv~e~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~~~~~~  201 (351)
                      |+||||+++++|.+++....  ...+++..++.++.||+.||.|||++||+||||||+||+++                 
T Consensus       292 ~lv~E~~~~g~L~~~l~~~~--~~~~~~~~~~~i~~qi~~~L~~LH~~~ivHrDlkp~NIll~-----------------  352 (495)
T 1opk_A          292 YIITEFMTYGNLLDYLRECN--RQEVSAVVLLYMATQISSAMEYLEKKNFIHRNLAARNCLVG-----------------  352 (495)
T ss_dssp             EEEEECCTTCBHHHHHHHSC--TTTSCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEC-----------------
T ss_pred             EEEEEccCCCCHHHHHHhcC--cCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChhhEEEC-----------------
Confidence            99999999999999998642  34689999999999999999999999999999999999998                 


Q ss_pred             ccCCeEEeecCCccccccCCCCccccccccCCCcccceeccCCCCCccchHhHHHHHHHHHHh-CccccccccCCCCCce
Q 018699          202 QDQGLCLVDWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQEKKPWKFQVDTYGLCAIVHMMLH-NSYMEIEKKASPDGGL  280 (351)
Q Consensus       202 ~~~~~~l~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~-g~~p~~~~~~~~~~~~  280 (351)
                      .++.+||+|||++...... .........++..|+|||++.+..++.++|||||||++|+|++ |..||...........
T Consensus       353 ~~~~~kl~DFG~a~~~~~~-~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlG~~l~el~t~g~~p~~~~~~~~~~~~  431 (495)
T 1opk_A          353 ENHLVKVADFGLSRLMTGD-TYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYEL  431 (495)
T ss_dssp             GGGCEEECCTTCEECCTTC-CEECCTTCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGHHHH
T ss_pred             CCCcEEEeecccceeccCC-ceeecCCCcCCcceeCHhHHhcCCCCcHHhHHhHHHHHHHHHhCCCCCCCCCCHHHHHHH
Confidence            7788999999998754211 1111223345678999999988889999999999999999999 8889865432210000


Q ss_pred             -eeecCcchhhhhHHHHHHHHHHHHhcCCCCCChHHHHHHHHHHHHHHhhChHHHHHHHHHHHHh
Q 018699          281 -VYLPKLSFKRYWKVELWKSLFTNLLNMSSGNDKEVLQNLQKSFQDYLCSNPQLLKNLKELLAKQ  344 (351)
Q Consensus       281 -~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~~~~~~~~~~~~~~~~~~~~~~~~~  344 (351)
                       ........+..++ +.+.+||.+||+.||++||++.++++. ++.++.. ......+...+.++
T Consensus       432 ~~~~~~~~~~~~~~-~~l~~li~~cl~~dP~~RPs~~el~~~-L~~~~~~-~~~~~~~~~~l~~~  493 (495)
T 1opk_A          432 LEKDYRMERPEGCP-EKVYELMRACWQWNPSDRPSFAEIHQA-FETMFQE-SSISDEVEKELGKR  493 (495)
T ss_dssp             HHTTCCCCCCTTCC-HHHHHHHHHHTCSSGGGSCCHHHHHHH-HHTSCSS-SCHHHHHHHHHHC-
T ss_pred             HHcCCCCCCCCCCC-HHHHHHHHHHcCcChhHCcCHHHHHHH-HHHHHhc-cccchHHHHHhccC
Confidence             0011122333444 789999999999999999999999764 4444433 33455555555443

>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A*

Probab=100.00  E-value=3.6e-41  Score=296.53  Aligned_cols=248  Identities=10%  Similarity=0.044  Sum_probs=192.1

Q ss_pred             EEcCeeEEEEEEeeccCceEEEEEEecCCCCceEEEEecCCCCChHH--HHHHHHHhhhccccccccccceeeeccc--C
Q 018699           44 EIGGKKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFPWEF--YMYRQLDQRISGRERSSFGFAHRIHLYS--D  119 (351)
Q Consensus        44 ~i~~~~Y~i~~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~~~e~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~  119 (351)
                      .+..++|++.+.||+|+||+||+|+++   ++.||+|++........  ..+...........|++++.+..++...  +
T Consensus         6 ~i~~~~y~~~~~lg~G~~g~V~~~~~~---~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~   82 (271)
T 3kmu_A            6 GIDFKQLNFLTKLNENHSGELWKGRWQ---GNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQSPPAP   82 (271)
T ss_dssp             CCCGGGCEEEEEEEEETTEEEEEEEET---TEEEEEEEECCTTCCHHHHHHHHHHGGGGCCCSCTTEECEEEEECTTTSS
T ss_pred             CCCHHHhHHHHHhcCCCcceEEEEEEC---CeeEEEEEecccccCHHHHHHHHHHHHHHHhcCCCchhheEEEEccCCCC
Confidence            355679999999999999999999952   78899999886543322  2223333344556788888888877665  7


Q ss_pred             eeEEEEEecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCC--ceecCCCCCcEEEeecCCcceeeccCC
Q 018699          120 YSILVCDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVG--IIHGDFKPDNLLIRYARDELTVLDHDR  197 (351)
Q Consensus       120 ~~~lv~e~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~--i~H~dl~p~Nill~~~~~~~~~~~~~~  197 (351)
                      ..++||||+++++|.+++....  +..+++..++.++.|++.||.|||++|  ++|+||+|+||+++             
T Consensus        83 ~~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~~i~~qi~~~l~~lH~~~~~i~H~dikp~Nil~~-------------  147 (271)
T 3kmu_A           83 HPTLITHWMPYGSLYNVLHEGT--NFVVDQSQAVKFALDMARGMAFLHTLEPLIPRHALNSRSVMID-------------  147 (271)
T ss_dssp             SCEEEEECCTTCBHHHHHHSCS--SCCCCHHHHHHHHHHHHHHHHHHTTSSSCCTTCCCSGGGEEEC-------------
T ss_pred             CeEeeecccCCCcHHHHHhhcc--cCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCccceEEEc-------------
Confidence            8899999999999999998632  235899999999999999999999999  99999999999999             


Q ss_pred             CCCcccCCeEEeecCCccccccCCCCccccccccCCCcccceeccCCCCCc---cchHhHHHHHHHHHHhCccccccccC
Q 018699          198 SGPWQDQGLCLVDWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQEKKPWKF---QVDTYGLCAIVHMMLHNSYMEIEKKA  274 (351)
Q Consensus       198 ~~~~~~~~~~l~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~---~~DiwslG~il~~l~~g~~p~~~~~~  274 (351)
                          .++.++|+|||++....       .....+|+.|+|||++.+..++.   ++|||||||++|+|++|..||.....
T Consensus       148 ----~~~~~~l~~~~~~~~~~-------~~~~~~t~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~  216 (271)
T 3kmu_A          148 ----EDMTARISMADVKFSFQ-------SPGRMYAPAWVAPEALQKKPEDTNRRSADMWSFAVLLWELVTREVPFADLSN  216 (271)
T ss_dssp             ----TTSCEEEEGGGSCCTTS-------CTTCBSCGGGSCHHHHHSCGGGSCHHHHHHHHHHHHHHHHHHCSCTTTTSCH
T ss_pred             ----CCcceeEEeccceeeec-------ccCccCCccccChhhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCccccCh
Confidence                67789999888764321       23346799999999998765543   79999999999999999999975432


Q ss_pred             CCCCce--eeecCcchhhhhHHHHHHHHHHHHhcCCCCCChHHHHHHHH
Q 018699          275 SPDGGL--VYLPKLSFKRYWKVELWKSLFTNLLNMSSGNDKEVLQNLQK  321 (351)
Q Consensus       275 ~~~~~~--~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~~  321 (351)
                      ......  ........+..++ +.+.++|.+||..||++||++.++++.
T Consensus       217 ~~~~~~~~~~~~~~~~~~~~~-~~~~~li~~~l~~~p~~Rps~~~il~~  264 (271)
T 3kmu_A          217 MEIGMKVALEGLRPTIPPGIS-PHVSKLMKICMNEDPAKRPKFDMIVPI  264 (271)
T ss_dssp             HHHHHHHHHSCCCCCCCTTCC-HHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             HHHHHHHHhcCCCCCCCCCCC-HHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence            210000  0111223334444 789999999999999999999999864

>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens}

Probab=100.00  E-value=1.8e-40  Score=303.62  Aligned_cols=252  Identities=20%  Similarity=0.238  Sum_probs=189.0

Q ss_pred             EEEEcCeeEEEEEEeeccCceEEEEEEecCCCCceEEEEecCCCCChHHH--HHHHHHhhhccccccccccceeeecccC
Q 018699           42 TIEIGGKKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFPWEFY--MYRQLDQRISGRERSSFGFAHRIHLYSD  119 (351)
Q Consensus        42 ~~~i~~~~Y~i~~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~~~e~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~  119 (351)
                      .+.+ .++|.+.+.||+|+||+||+|. +..+|+.||||++......+..  .............|++++.+..++...+
T Consensus        19 ~~~l-~~~y~~~~~lg~G~~g~V~~~~-~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~   96 (353)
T 3coi_A           19 AWEL-PKTYVSPTHVGSGAYGSVCSAI-DKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPAS   96 (353)
T ss_dssp             EEEE-ETTEEEEEEEEECSSEEEEEEE-ETTTTEEEEEEEESSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCS
T ss_pred             cccc-CceEEEeeeEecCCCeEEEEEE-ECCCCCEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCcccHhheEeccc
Confidence            3344 4689999999999999999999 5778999999998765443321  1122222334456788888777765543


Q ss_pred             ------eeEEEEEecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceee
Q 018699          120 ------YSILVCDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVL  193 (351)
Q Consensus       120 ------~~~lv~e~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~  193 (351)
                            ..|+||||+. ++|.+++.      ..+++..++.++.||+.||.|||++||+|+||+|+||+++         
T Consensus        97 ~~~~~~~~~lv~e~~~-~~l~~~~~------~~~~~~~~~~i~~qi~~al~~LH~~~ivH~dlkp~NIl~~---------  160 (353)
T 3coi_A           97 SLRNFYDFYLVMPFMQ-TDLQKIMG------LKFSEEKIQYLVYQMLKGLKYIHSAGVVHRDLKPGNLAVN---------  160 (353)
T ss_dssp             SGGGCCCCEEEEECCS-EEGGGTTT------SCCCHHHHHHHHHHHHHHHHHHHHTTCCCSSCCGGGEEEC---------
T ss_pred             ccccceeEEEEecccc-CCHHHHhc------CCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEeEC---------
Confidence                  3499999995 68877663      4589999999999999999999999999999999999999         


Q ss_pred             ccCCCCCcccCCeEEeecCCccccccCCCCccccccccCCCcccceeccC-CCCCccchHhHHHHHHHHHHhCccccccc
Q 018699          194 DHDRSGPWQDQGLCLVDWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQEK-KPWKFQVDTYGLCAIVHMMLHNSYMEIEK  272 (351)
Q Consensus       194 ~~~~~~~~~~~~~~l~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~~DiwslG~il~~l~~g~~p~~~~  272 (351)
                              .++.++|+|||++....     .......+|+.|+|||++.+ ..++.++|||||||++|+|++|..||...
T Consensus       161 --------~~~~~kl~Dfg~~~~~~-----~~~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~  227 (353)
T 3coi_A          161 --------EDCELKILDFGLARHAD-----AEMTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGK  227 (353)
T ss_dssp             --------TTCCEEECSTTCTTC-------------CCSBCCSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSSBSS
T ss_pred             --------CCCcEEEeecccccCCC-----CCccccccCcCcCCHHHHhCcCCCCchhhHHHHHHHHHHHHhCCCCCCCC
Confidence                    77889999999986432     22344578999999999876 67889999999999999999999999754


Q ss_pred             cCCCCC----------------------------ceeeecCcc---hhhhhHHHHHHHHHHHHhcCCCCCChHHHHHHHH
Q 018699          273 KASPDG----------------------------GLVYLPKLS---FKRYWKVELWKSLFTNLLNMSSGNDKEVLQNLQK  321 (351)
Q Consensus       273 ~~~~~~----------------------------~~~~~~~~~---~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~~  321 (351)
                      ......                            .....+...   .....+ +.+.+||.+||..||++||++.|+++|
T Consensus       228 ~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~li~~~L~~dp~~Rpt~~e~l~h  306 (353)
T 3coi_A          228 DYLDQLTQILKVTGVPGTEFVQKLNDKAAKSYIQSLPQTPRKDFTQLFPRAS-PQAADLLEKMLELDVDKRLTAAQALTH  306 (353)
T ss_dssp             CHHHHHHHHHHHHCBCCHHHHTTCSCHHHHHHHHTSCBCSSCCTTTTCTTSC-HHHHHHHHHHSCSCTTTSCCHHHHHTS
T ss_pred             CHHHHHHHHHHHhCCCCHHHHHHHhhHHHHHHHHhCcCCCCccHHHhcCCcC-HHHHHHHHHHcCCCcccCCCHHHHhcC
Confidence            311000                            000000111   111223 789999999999999999999999999


Q ss_pred             HHHH
Q 018699          322 SFQD  325 (351)
Q Consensus       322 ~~~~  325 (351)
                      ||..
T Consensus       307 p~f~  310 (353)
T 3coi_A          307 PFFE  310 (353)
T ss_dssp             GGGT
T ss_pred             cchh
Confidence            8743

>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group}

Probab=100.00  E-value=1.8e-40  Score=314.39  Aligned_cols=252  Identities=17%  Similarity=0.214  Sum_probs=190.4

Q ss_pred             CeeEEEEEEeeccCceEEEEEEecCCCCceEEEEecCCCCCh-HHHHHHHHHhhhccccccccccceeeecccCeeEEEE
Q 018699           47 GKKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFPW-EFYMYRQLDQRISGRERSSFGFAHRIHLYSDYSILVC  125 (351)
Q Consensus        47 ~~~Y~i~~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~~~-e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~  125 (351)
                      +++|++.++||+|+||.||+|. +..+++.||||++...... .......+...  ...++++..+..+....+..++||
T Consensus         6 ~~~y~i~~~LG~G~fG~Vy~a~-~~~~~~~vAvK~~~~~~~~~~~~~E~~il~~--L~~~~~i~~i~~~~~~~~~~~lvm   82 (483)
T 3sv0_A            6 GNKFRLGRKIGSGSFGEIYLGT-NIQTNEEVAIKLENVKTKHPQLLYESKIYRI--LQGGTGIPNVRWFGVEGDYNVLVM   82 (483)
T ss_dssp             TTTEECCCCCEECSSCEEEEEE-ETTTCCEEEEEEEETTCSSCCHHHHHHHHHH--TTTSTTCCCEEEEEEETTEEEEEE
T ss_pred             CCcEEEEEEEeeCCCEEEEEEE-ECCCCcEEEEEEeccccccHHHHHHHHHHHH--hcCCCCCCeEEEEEeeCCEEEEEE
Confidence            6899999999999999999999 5678899999987644322 11111122221  122344555555666788899999


Q ss_pred             EecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeeccCCCCCcccCC
Q 018699          126 DYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSGPWQDQG  205 (351)
Q Consensus       126 e~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~~~~~~~~~~  205 (351)
                      ||+ +++|.+++...   +..+++..++.++.||+.||.|||++||+||||||+||+++.++              ..+.
T Consensus        83 e~~-g~sL~~ll~~~---~~~l~~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~--------------~~~~  144 (483)
T 3sv0_A           83 DLL-GPSLEDLFNFC---SRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGR--------------RANQ  144 (483)
T ss_dssp             ECC-CCBHHHHHHHT---TTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECCGG--------------GTTC
T ss_pred             ECC-CCCHHHHHHhh---cCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccCcceEEEecCC--------------CCCe
Confidence            999 99999999864   46799999999999999999999999999999999999995221              5678


Q ss_pred             eEEeecCCccccccCCCC-----ccccccccCCCcccceeccCCCCCccchHhHHHHHHHHHHhCccccccccCCCCCc-
Q 018699          206 LCLVDWGRGIDLHLFPDN-----MEFEGDCRTSGFRCIEMQEKKPWKFQVDTYGLCAIVHMMLHNSYMEIEKKASPDGG-  279 (351)
Q Consensus       206 ~~l~Dfg~a~~~~~~~~~-----~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~p~~~~~~~~~~~-  279 (351)
                      ++|+|||++.........     .......||+.|+|||++.+..++.++|||||||++|+|++|..||.......... 
T Consensus       145 vkL~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDvwSlGvil~elltG~~Pf~~~~~~~~~~~  224 (483)
T 3sv0_A          145 VYIIDFGLAKKYRDTSTHQHIPYRENKNLTGTARYASVNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQK  224 (483)
T ss_dssp             EEECCCTTCEECBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSHHHH
T ss_pred             EEEEeCCcceeccCCccccccccccccccCCCccccCHHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccchhHHHH
Confidence            999999999754432211     11235679999999999999999999999999999999999999997644321100 


Q ss_pred             ee-------eecCcchhhhhHHHHHHHHHHHHhcCCCCCChHHHHHHH
Q 018699          280 LV-------YLPKLSFKRYWKVELWKSLFTNLLNMSSGNDKEVLQNLQ  320 (351)
Q Consensus       280 ~~-------~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~  320 (351)
                      +.       ......+...++ +.+.+||.+||..||++||++.+++.
T Consensus       225 ~~~i~~~~~~~~~~~l~~~~p-~~l~~li~~cl~~dP~~RPs~~el~~  271 (483)
T 3sv0_A          225 YEKISEKKVATSIEALCRGYP-TEFASYFHYCRSLRFDDKPDYSYLKR  271 (483)
T ss_dssp             HHHHHHHHHHSCHHHHHTTSC-HHHHHHHHHHHTCCTTCCCCHHHHHH
T ss_pred             HHHHhhccccccHHHHhcCCc-HHHHHHHHHHhcCChhhCcCHHHHHH
Confidence            00       001111122233 78999999999999999999988765

>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B*

Probab=100.00  E-value=5.3e-41  Score=298.69  Aligned_cols=259  Identities=15%  Similarity=0.073  Sum_probs=185.9

Q ss_pred             eEEEEcCeeEEEEEEeeccCceEEEEEEecCCCCc--eEEEEecCCCCCh---HHHHHHHHHhhhccccccccccceeee
Q 018699           41 KTIEIGGKKYQIKGCAGQGGFAKVFKAYVNGDPED--VVALKIQKPAFPW---EFYMYRQLDQRISGRERSSFGFAHRIH  115 (351)
Q Consensus        41 ~~~~i~~~~Y~i~~~lg~G~~g~V~~a~~~~~~~~--~vaiK~~~~~~~~---e~~~~~~~~~~~~~~~~~~~~~~~~~~  115 (351)
                      ....+..++|++.+.||+|+||+||+|.++..+++  .||+|++......   ....+...........|++++....+.
T Consensus        11 ~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~   90 (291)
T 1u46_A           11 LTCLIGEKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVV   90 (291)
T ss_dssp             CCEECCGGGEEEEEECC----CCCEEEEEECTTSCEEEEEEEC--------CHHHHHHHHHHHHHHHCCCTTBCCEEEEE
T ss_pred             cccccchhHeeeeeeecCCCceeEEEEEeccCCCceeEEEEEEEccCccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEE
Confidence            34567788999999999999999999986444443  6899998765322   222222222333445688888888777


Q ss_pred             cccCeeEEEEEecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeecc
Q 018699          116 LYSDYSILVCDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDH  195 (351)
Q Consensus       116 ~~~~~~~lv~e~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~  195 (351)
                      .... .++||||+++++|.+++...   +..+++..++.++.|++.|+.|||++|++|+||+|+||+++           
T Consensus        91 ~~~~-~~~v~e~~~~~~L~~~l~~~---~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dikp~Nili~-----------  155 (291)
T 1u46_A           91 LTPP-MKMVTELAPLGSLLDRLRKH---QGHFLLGTLSRYAVQVAEGMGYLESKRFIHRDLAARNLLLA-----------  155 (291)
T ss_dssp             CSSS-CEEEEECCTTCBHHHHHHHH---GGGSCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEEE-----------
T ss_pred             ccCC-ceeeEecccCCCHHHHHHhc---cCCcCHHHHHHHHHHHHHHHHHHHhCCcccCCCchheEEEc-----------
Confidence            6554 78999999999999999875   35789999999999999999999999999999999999999           


Q ss_pred             CCCCCcccCCeEEeecCCccccccCCCCc-cccccccCCCcccceeccCCCCCccchHhHHHHHHHHHHh-Ccccccccc
Q 018699          196 DRSGPWQDQGLCLVDWGRGIDLHLFPDNM-EFEGDCRTSGFRCIEMQEKKPWKFQVDTYGLCAIVHMMLH-NSYMEIEKK  273 (351)
Q Consensus       196 ~~~~~~~~~~~~l~Dfg~a~~~~~~~~~~-~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~-g~~p~~~~~  273 (351)
                            .++.++|+|||++.......... ......++..|+|||++.+..++.++||||||+++|+|++ |..||....
T Consensus       156 ------~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~  229 (291)
T 1u46_A          156 ------TRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLN  229 (291)
T ss_dssp             ------ETTEEEECCCTTCEECCC-CCEEEC-----CCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCTTTTCC
T ss_pred             ------CCCCEEEccccccccccccccchhhhccCCCCceeeCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCcccCC
Confidence                  66779999999986543221111 1223456778999999988888999999999999999999 999986543


Q ss_pred             CCCCCcee--eecCcchhhhhHHHHHHHHHHHHhcCCCCCChHHHHHHHH
Q 018699          274 ASPDGGLV--YLPKLSFKRYWKVELWKSLFTNLLNMSSGNDKEVLQNLQK  321 (351)
Q Consensus       274 ~~~~~~~~--~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~~  321 (351)
                      ........  .....+.+..++ +.+.++|.+||..||.+||++.+++.+
T Consensus       230 ~~~~~~~~~~~~~~~~~~~~~~-~~l~~li~~~l~~~p~~Rps~~~l~~~  278 (291)
T 1u46_A          230 GSQILHKIDKEGERLPRPEDCP-QDIYNVMVQCWAHKPEDRPTFVALRDF  278 (291)
T ss_dssp             HHHHHHHHHTSCCCCCCCTTCC-HHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             HHHHHHHHHccCCCCCCCcCcC-HHHHHHHHHHccCCcccCcCHHHHHHH
Confidence            21000000  001112223344 789999999999999999999999875

>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7

Probab=100.00  E-value=2.7e-40  Score=304.37  Aligned_cols=255  Identities=10%  Similarity=0.074  Sum_probs=184.7

Q ss_pred             cCeeEEEEEEeeccCceEEEEEEecCCC--CceEEEEecCCCCC-hHHHHHHHHHhhhccccccccccceeee-cccCee
Q 018699           46 GGKKYQIKGCAGQGGFAKVFKAYVNGDP--EDVVALKIQKPAFP-WEFYMYRQLDQRISGRERSSFGFAHRIH-LYSDYS  121 (351)
Q Consensus        46 ~~~~Y~i~~~lg~G~~g~V~~a~~~~~~--~~~vaiK~~~~~~~-~e~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~  121 (351)
                      ....|++.+.||+|+||+||+|.+...+  +..||+|.+..... .+...+...........|++++.+..+. ...+..
T Consensus        87 ~~~~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~  166 (373)
T 3c1x_A           87 SSLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSP  166 (373)
T ss_dssp             TTEEEEEEEEEECCSSSEEEEEEEEETTTEEEEEEEEECCSCSCSHHHHHHHHHHTTSTTCCCTTBCCCCEEECCCSSCC
T ss_pred             hhceeecCcEeeeCCCeEEEEEEEECCCCcEEEEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCCCe
Confidence            3467999999999999999999963333  35789999865432 2233333333344556788888888765 345688


Q ss_pred             EEEEEecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeeccCCCCCc
Q 018699          122 ILVCDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSGPW  201 (351)
Q Consensus       122 ~lv~e~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~~~~~~  201 (351)
                      ++||||+++++|.+++...   +..+++..++.++.||+.||.|||++||+||||||+||+++                 
T Consensus       167 ~lv~e~~~~g~L~~~l~~~---~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~-----------------  226 (373)
T 3c1x_A          167 LVVLPYMKHGDLRNFIRNE---THNPTVKDLIGFGLQVAKGMKFLASKKFVHRDLAARNCMLD-----------------  226 (373)
T ss_dssp             EEEEECCTTCBHHHHHHCT---TCCCBHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEC-----------------
T ss_pred             EEEEECCCCCCHHHHHhhc---ccCCCHHHHHHHHHHHHHHHHHHHHCCEecCccchheEEEC-----------------
Confidence            9999999999999999764   45688999999999999999999999999999999999998                 


Q ss_pred             ccCCeEEeecCCccccccCCCC--ccccccccCCCcccceeccCCCCCccchHhHHHHHHHHHHh-CccccccccCCCCC
Q 018699          202 QDQGLCLVDWGRGIDLHLFPDN--MEFEGDCRTSGFRCIEMQEKKPWKFQVDTYGLCAIVHMMLH-NSYMEIEKKASPDG  278 (351)
Q Consensus       202 ~~~~~~l~Dfg~a~~~~~~~~~--~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~-g~~p~~~~~~~~~~  278 (351)
                      .++.+||+|||++.........  .......+++.|+|||.+.+..++.++|||||||++|+|++ |.+||.........
T Consensus       227 ~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt~~~~p~~~~~~~~~~  306 (373)
T 3c1x_A          227 EKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDIT  306 (373)
T ss_dssp             TTCCEEECCC---------------------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCSSCHH
T ss_pred             CCCCEEEeeccccccccccccccccccCCCCCcccccChHHhcCCCCCcHHHHHHHHHHHHHHHhCcCCCCCCCCHHHHH
Confidence            7788999999998653221111  11233456788999999999999999999999999999999 66777654332110


Q ss_pred             cee-eecCcchhhhhHHHHHHHHHHHHhcCCCCCChHHHHHHHH
Q 018699          279 GLV-YLPKLSFKRYWKVELWKSLFTNLLNMSSGNDKEVLQNLQK  321 (351)
Q Consensus       279 ~~~-~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~~  321 (351)
                      ... .......+..++ +.+.++|.+||+.||++||++.+++++
T Consensus       307 ~~~~~~~~~~~p~~~~-~~l~~li~~cl~~dp~~RPs~~ell~~  349 (373)
T 3c1x_A          307 VYLLQGRRLLQPEYCP-DPLYEVMLKCWHPKAEMRPSFSELVSR  349 (373)
T ss_dssp             HHHHTTCCCCCCTTCC-HHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             HHHHcCCCCCCCCCCC-HHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence            000 011112233344 789999999999999999999999875

>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens}

Probab=100.00  E-value=3e-40  Score=298.97  Aligned_cols=257  Identities=13%  Similarity=0.131  Sum_probs=195.7

Q ss_pred             EEcCeeEEEEEEeeccCceEEEEEEe---cCCCCceEEEEecCCCCChHHHHHHHHHhhhccccccccccceeeeccc--
Q 018699           44 EIGGKKYQIKGCAGQGGFAKVFKAYV---NGDPEDVVALKIQKPAFPWEFYMYRQLDQRISGRERSSFGFAHRIHLYS--  118 (351)
Q Consensus        44 ~i~~~~Y~i~~~lg~G~~g~V~~a~~---~~~~~~~vaiK~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--  118 (351)
                      .+..++|++.+.||+|+||+||+|++   +..+++.||+|++..........+...........+++++.+..+....  
T Consensus        37 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~  116 (326)
T 2w1i_A           37 QFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGR  116 (326)
T ss_dssp             CCCGGGEEEEEEEECCSSEEEEEEEECTTSSSCCEEEEEEEESSCCSHHHHHHHHHHHHHHTCCCTTBCCEEEEECC---
T ss_pred             ccCHHHceeeeeeccCCCeEEEEEEeccccCCCceEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEEecCC
Confidence            45678999999999999999999985   3567899999998876544443333333444555678888877766543  


Q ss_pred             CeeEEEEEecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeeccCCC
Q 018699          119 DYSILVCDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRS  198 (351)
Q Consensus       119 ~~~~lv~e~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~~~  198 (351)
                      ...++||||+++++|.+++...   +..+++..++.++.|++.||.+||++||+|+||||+||+++              
T Consensus       117 ~~~~lv~e~~~~~~L~~~l~~~---~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dikp~NIli~--------------  179 (326)
T 2w1i_A          117 RNLKLIMEYLPYGSLRDYLQKH---KERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVE--------------  179 (326)
T ss_dssp             -CCEEEECCCTTCBHHHHHHHS---TTSSCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEEE--------------
T ss_pred             CceEEEEECCCCCCHHHHHHhc---ccCCCHHHHHHHHHHHHHHHHHHHhCCEeccCCCcceEEEc--------------
Confidence            4789999999999999999874   35689999999999999999999999999999999999999              


Q ss_pred             CCcccCCeEEeecCCccccccCCCCcc-ccccccCCCcccceeccCCCCCccchHhHHHHHHHHHHhCccccccccC---
Q 018699          199 GPWQDQGLCLVDWGRGIDLHLFPDNME-FEGDCRTSGFRCIEMQEKKPWKFQVDTYGLCAIVHMMLHNSYMEIEKKA---  274 (351)
Q Consensus       199 ~~~~~~~~~l~Dfg~a~~~~~~~~~~~-~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~p~~~~~~---  274 (351)
                         .++.++|+|||++........... .....++..|+|||.+.+..++.++||||||+++|+|++|..|+.....   
T Consensus       180 ---~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~~~~~  256 (326)
T 2w1i_A          180 ---NENRVKIGDFGLTKVLPQDKEYYKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFM  256 (326)
T ss_dssp             ---ETTEEEECCCTTCEECCSSCSEEECSSCCSCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHHTTCGGGSHHHHHH
T ss_pred             ---CCCcEEEecCcchhhccccccccccccCCCCceeEECchhhcCCCCCchhhHHHHHHHHHHHHhcCCCCCCCHHHHH
Confidence               677799999999875432211111 1233467789999999888889999999999999999999988753310   


Q ss_pred             -----CCCCce---------eeecCcchhhhhHHHHHHHHHHHHhcCCCCCChHHHHHHHH
Q 018699          275 -----SPDGGL---------VYLPKLSFKRYWKVELWKSLFTNLLNMSSGNDKEVLQNLQK  321 (351)
Q Consensus       275 -----~~~~~~---------~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~~  321 (351)
                           ......         ......+.+..++ +.+.+||.+||..||++||++.+++..
T Consensus       257 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~l~~li~~cl~~dP~~Rps~~el~~~  316 (326)
T 2w1i_A          257 RMIGNDKQGQMIVFHLIELLKNNGRLPRPDGCP-DEIYMIMTECWNNNVNQRPSFRDLALR  316 (326)
T ss_dssp             HHHCTTCCTHHHHHHHHHHHHTTCCCCCCTTCC-HHHHHHHHHHSCSSGGGSCCHHHHHHH
T ss_pred             HhhccccchhhhHHHHHHHhhcCCCCCCCCccc-HHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence                 000000         0001122233344 789999999999999999999998864

>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A*

Probab=100.00  E-value=8.2e-41  Score=295.75  Aligned_cols=250  Identities=13%  Similarity=0.104  Sum_probs=185.7

Q ss_pred             EEEEcCeeEEEEEEeeccCceEEEEEEecCCCCceEEEEecCCCCChHHHHHHHHHhhhccccccccccceeeec-ccCe
Q 018699           42 TIEIGGKKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFPWEFYMYRQLDQRISGRERSSFGFAHRIHL-YSDY  120 (351)
Q Consensus        42 ~~~i~~~~Y~i~~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~  120 (351)
                      .+.+..++|++.+.||+|+||+||+|.+   .|+.||+|++......  ..+...........|++++....+.. ..+.
T Consensus        15 ~~~~~~~~y~~~~~lg~G~~g~V~~~~~---~~~~vavK~~~~~~~~--~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~   89 (278)
T 1byg_A           15 GWALNMKELKLLQTIGKGEFGDVMLGDY---RGNKVAVKCIKNDATA--QAFLAEASVMTQLRHSNLVQLLGVIVEEKGG   89 (278)
T ss_dssp             CCBCCGGGEEEEEEEEECSSCEEEEEEE---TTEEEEEEECCCCC----HHHHHTHHHHTTCCCTTBCCEEEEECCC--C
T ss_pred             cccCChhhceEEeEEecCCCceEEEEEE---cCCEEEEEEecchhHH--HHHHHHHHHHHhCCCCCEeeEEEEEEcCCCc
Confidence            3456678999999999999999999984   3789999998765422  22222223344556788888777654 3457


Q ss_pred             eEEEEEecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeeccCCCCC
Q 018699          121 SILVCDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSGP  200 (351)
Q Consensus       121 ~~lv~e~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~~~~~  200 (351)
                      .++||||+++++|.+++....  ...+++..++.++.|++.|+.|||++|++|+||+|+||+++                
T Consensus        90 ~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~Nil~~----------------  151 (278)
T 1byg_A           90 LYIVTEYMAKGSLVDYLRSRG--RSVLGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAARNVLVS----------------  151 (278)
T ss_dssp             CEEEECCCTTEEHHHHHHHHH--HHHCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEC----------------
T ss_pred             eEEEEecCCCCCHHHHHHhcc--cccCCHHHHHHHHHHHHHHHHHHHhCCccccCCCcceEEEe----------------
Confidence            899999999999999998753  23478899999999999999999999999999999999999                


Q ss_pred             cccCCeEEeecCCccccccCCCCccccccccCCCcccceeccCCCCCccchHhHHHHHHHHHHh-CccccccccCCCCCc
Q 018699          201 WQDQGLCLVDWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQEKKPWKFQVDTYGLCAIVHMMLH-NSYMEIEKKASPDGG  279 (351)
Q Consensus       201 ~~~~~~~l~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~-g~~p~~~~~~~~~~~  279 (351)
                       .++.++|+|||++.....     ......+++.|+|||++.+..++.++||||||+++|+|++ |..||..........
T Consensus       152 -~~~~~~l~Dfg~~~~~~~-----~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~~~~~  225 (278)
T 1byg_A          152 -EDNVAKVSDFGLTKEASS-----TQDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVP  225 (278)
T ss_dssp             -TTSCEEECCCCC-----------------CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCGGGHHH
T ss_pred             -CCCcEEEeeccccccccc-----cccCCCccccccCHHHhCCCCCCchhcHHHHHHHHHHHHhCCCCCCCCCCHHHHHH
Confidence             678899999998864321     1223356889999999988889999999999999999998 999986543221000


Q ss_pred             e-eeecCcchhhhhHHHHHHHHHHHHhcCCCCCChHHHHHHHH
Q 018699          280 L-VYLPKLSFKRYWKVELWKSLFTNLLNMSSGNDKEVLQNLQK  321 (351)
Q Consensus       280 ~-~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~~  321 (351)
                      . ........+...+ +.+.++|.+||..||++||++.+++..
T Consensus       226 ~~~~~~~~~~~~~~~-~~l~~li~~~l~~~p~~Rps~~~l~~~  267 (278)
T 1byg_A          226 RVEKGYKMDAPDGCP-PAVYEVMKNCWHLDAAMRPSFLQLREQ  267 (278)
T ss_dssp             HHTTTCCCCCCTTCC-HHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             HHhcCCCCCCcccCC-HHHHHHHHHHhcCChhhCCCHHHHHHH
Confidence            0 0001122233334 789999999999999999999999864

>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A*

Probab=100.00  E-value=5.5e-41  Score=303.86  Aligned_cols=256  Identities=12%  Similarity=0.082  Sum_probs=190.9

Q ss_pred             EcCeeEEEEEEeeccCceEEEEEEecCCCCce--EEEEecCCCCCh-HHHHHHHHHhhhccc-cccccccceeeecccCe
Q 018699           45 IGGKKYQIKGCAGQGGFAKVFKAYVNGDPEDV--VALKIQKPAFPW-EFYMYRQLDQRISGR-ERSSFGFAHRIHLYSDY  120 (351)
Q Consensus        45 i~~~~Y~i~~~lg~G~~g~V~~a~~~~~~~~~--vaiK~~~~~~~~-e~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~  120 (351)
                      +..++|++.+.||+|+||+||+|++ ..++..  ||+|.+...... ....+......+... .|++++.+..+....+.
T Consensus        22 ~~~~~y~~~~~lg~G~~g~Vy~~~~-~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~  100 (327)
T 1fvr_A           22 LDWNDIKFQDVIGEGNFGQVLKARI-KKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGY  100 (327)
T ss_dssp             CCGGGCEEEEEEECGGGCEEEEEEE-EETTEEEEEEEEEEECC------CHHHHHHHHHTTCCCCTTBCCEEEEEEETTE
T ss_pred             ccHHHccceeeeecCCCceEEEEEE-ccCCcccceeeeeeccccchHHHHHHHHHHHHHHhccCCCchhhhceeeeeCCc
Confidence            4457999999999999999999995 455664  499987643221 111122222223334 68899999888888899


Q ss_pred             eEEEEEecCCCCHHHHHHHHH------------hhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCC
Q 018699          121 SILVCDYLSQGTLQDAINSYV------------VIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARD  188 (351)
Q Consensus       121 ~~lv~e~~~~~sL~~~l~~~~------------~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~  188 (351)
                      .|+||||+++++|.+++....            ..+..+++..++.++.||+.||.|||++||+|+||||+||+++    
T Consensus       101 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIl~~----  176 (327)
T 1fvr_A          101 LYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVG----  176 (327)
T ss_dssp             EEEEECCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEC----
T ss_pred             eEEEEecCCCCCHHHHHHhcccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhCCccCCCCccceEEEc----
Confidence            999999999999999997631            1124789999999999999999999999999999999999998    


Q ss_pred             cceeeccCCCCCcccCCeEEeecCCccccccCCCCccccccccCCCcccceeccCCCCCccchHhHHHHHHHHHHh-Ccc
Q 018699          189 ELTVLDHDRSGPWQDQGLCLVDWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQEKKPWKFQVDTYGLCAIVHMMLH-NSY  267 (351)
Q Consensus       189 ~~~~~~~~~~~~~~~~~~~l~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~-g~~  267 (351)
                                   .++.++|+|||++......   .......+++.|+|||++.+..++.++|||||||++|+|++ |..
T Consensus       177 -------------~~~~~kL~Dfg~~~~~~~~---~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~  240 (327)
T 1fvr_A          177 -------------ENYVAKIADFGLSRGQEVY---VKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGT  240 (327)
T ss_dssp             -------------GGGCEEECCTTCEESSCEE---CCC----CCTTTCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCC
T ss_pred             -------------CCCeEEEcccCcCcccccc---ccccCCCCCccccChhhhccccCCchhcchHHHHHHHHHHcCCCC
Confidence                         7788999999998642211   11223346788999999988888999999999999999998 999


Q ss_pred             ccccccCCCCCce-eeecCcchhhhhHHHHHHHHHHHHhcCCCCCChHHHHHHHHH
Q 018699          268 MEIEKKASPDGGL-VYLPKLSFKRYWKVELWKSLFTNLLNMSSGNDKEVLQNLQKS  322 (351)
Q Consensus       268 p~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~~~  322 (351)
                      ||........... ........+...+ +.+.+||.+||..||.+||++.+++.+.
T Consensus       241 pf~~~~~~~~~~~~~~~~~~~~~~~~~-~~l~~li~~~l~~dp~~Rps~~ell~~L  295 (327)
T 1fvr_A          241 PYCGMTCAELYEKLPQGYRLEKPLNCD-DEVYDLMRQCWREKPYERPSFAQILVSL  295 (327)
T ss_dssp             TTTTCCHHHHHHHGGGTCCCCCCTTBC-HHHHHHHHHHTCSSGGGSCCHHHHHHHH
T ss_pred             CCCCCcHHHHHHHhhcCCCCCCCCCCC-HHHHHHHHHHccCChhhCcCHHHHHHHH
Confidence            9865432100000 0001112222334 7899999999999999999999998863

>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A*

Probab=100.00  E-value=8.5e-41  Score=301.49  Aligned_cols=256  Identities=14%  Similarity=0.080  Sum_probs=192.0

Q ss_pred             EEEEcCeeEEEEEEeeccCceEEEEEEe---cCCCCceEEEEecCCCCChH-HHHHHHHHhhhccccccccccceeeecc
Q 018699           42 TIEIGGKKYQIKGCAGQGGFAKVFKAYV---NGDPEDVVALKIQKPAFPWE-FYMYRQLDQRISGRERSSFGFAHRIHLY  117 (351)
Q Consensus        42 ~~~i~~~~Y~i~~~lg~G~~g~V~~a~~---~~~~~~~vaiK~~~~~~~~e-~~~~~~~~~~~~~~~~~~~~~~~~~~~~  117 (351)
                      ...+.++.|++.+.||+|+||+||+|.+   +..+++.||||++....... ...+......+....+++++.+..+...
T Consensus        25 ~~~~~~r~~~~~~~lG~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~  104 (318)
T 3lxp_A           25 PTVFHKRYLKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHIIKYKGCCED  104 (318)
T ss_dssp             CCBCCGGGEEEEEEEEECSSEEEEEEEECSCC--CCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEE
T ss_pred             CceecHHHHhhhheecCCCCeEEEEEEEccCCCCCCcEEEEEEeccccChHHHHHHHHHHHHHHhCCCcchhhEEEEEec
Confidence            3345556669999999999999988864   34578999999998664322 2222222233444567888888877765


Q ss_pred             --cCeeEEEEEecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeecc
Q 018699          118 --SDYSILVCDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDH  195 (351)
Q Consensus       118 --~~~~~lv~e~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~  195 (351)
                        ....++||||+++++|.+++..     ..+++..++.++.|++.||.|||++||+|+||||+||+++           
T Consensus       105 ~~~~~~~lv~e~~~~~~L~~~l~~-----~~~~~~~~~~i~~~l~~~l~~LH~~~ivH~Dikp~Nil~~-----------  168 (318)
T 3lxp_A          105 AGAASLQLVMEYVPLGSLRDYLPR-----HSIGLAQLLLFAQQICEGMAYLHAQHYIHRDLAARNVLLD-----------  168 (318)
T ss_dssp             TTTTEEEEEECCCTTCBHHHHGGG-----SCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEC-----------
T ss_pred             CCCceEEEEEecccCCcHHHHHhh-----CCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCchheEEEc-----------
Confidence              4678999999999999999875     4589999999999999999999999999999999999998           


Q ss_pred             CCCCCcccCCeEEeecCCccccccCCCC-ccccccccCCCcccceeccCCCCCccchHhHHHHHHHHHHhCccccccccC
Q 018699          196 DRSGPWQDQGLCLVDWGRGIDLHLFPDN-MEFEGDCRTSGFRCIEMQEKKPWKFQVDTYGLCAIVHMMLHNSYMEIEKKA  274 (351)
Q Consensus       196 ~~~~~~~~~~~~l~Dfg~a~~~~~~~~~-~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~p~~~~~~  274 (351)
                            .++.++|+|||++......... .......+++.|+|||++.+..++.++|||||||++|+|++|..||.....
T Consensus       169 ------~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~  242 (318)
T 3lxp_A          169 ------NDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLTHCDSSQSPPT  242 (318)
T ss_dssp             ------TTCCEEECCGGGCEECCTTCSEEEC---CCCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHH
T ss_pred             ------CCCCEEECCccccccccccccccccccCCCCCceeeChHHhcCCCCCcHHHHHHHHHHHHHHHhCCCcccccch
Confidence                  7788999999998754322111 112334578889999999988889999999999999999999999864321


Q ss_pred             C-------CCCc---------eeeecCcchhhhhHHHHHHHHHHHHhcCCCCCChHHHHHHH
Q 018699          275 S-------PDGG---------LVYLPKLSFKRYWKVELWKSLFTNLLNMSSGNDKEVLQNLQ  320 (351)
Q Consensus       275 ~-------~~~~---------~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~  320 (351)
                      .       ....         .......+.+..++ +.+.+||.+||..||.+||++.+++.
T Consensus       243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~l~~li~~~l~~dP~~Rps~~ell~  303 (318)
T 3lxp_A          243 KFLELIGIAQGQMTVLRLTELLERGERLPRPDKCP-AEVYHLMKNCWETEASFRPTFENLIP  303 (318)
T ss_dssp             HHHHHHCSCCHHHHHHHHHHHHHTTCCCCCCTTCC-HHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             hhhhhhcccccchhHHHHHHHHhcccCCCCCcccc-HHHHHHHHHHcCCCcccCcCHHHHHH
Confidence            1       0000         00011222233344 78999999999999999999999985

>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7

Probab=100.00  E-value=5.1e-40  Score=293.36  Aligned_cols=253  Identities=11%  Similarity=0.098  Sum_probs=189.7

Q ss_pred             eeEEEEEEeeccCceEEEEEEec--CCCCceEEEEecCCCCChH-HHHHHHHHhhhccccccccccceeeecccCe-eEE
Q 018699           48 KKYQIKGCAGQGGFAKVFKAYVN--GDPEDVVALKIQKPAFPWE-FYMYRQLDQRISGRERSSFGFAHRIHLYSDY-SIL  123 (351)
Q Consensus        48 ~~Y~i~~~lg~G~~g~V~~a~~~--~~~~~~vaiK~~~~~~~~e-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~l  123 (351)
                      -.|.+.+.||+|+||+||+|.+.  ..++..||+|++....... .+.+...........|++++.+..++...+. .++
T Consensus        21 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~  100 (298)
T 3pls_A           21 VVTHSDRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNVLALIGIMLPPEGLPHV  100 (298)
T ss_dssp             EEEEEEEEEEEETTEEEEEEEEECSSSCEEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCCEE
T ss_pred             eEEccCceeccCCCceEEEEEEecCCCceeeeeeeeccccccHHHHHHHHHHHHHHHhCCCCCeeeEEEEEecCCCCcEE
Confidence            46888999999999999999852  2234479999987644322 2222222333445578888888887765544 499


Q ss_pred             EEEecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeeccCCCCCccc
Q 018699          124 VCDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSGPWQD  203 (351)
Q Consensus       124 v~e~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~~~~~~~~  203 (351)
                      ||||+.+++|.+++...   +..+++..++.++.|++.|+.|||++||+|+||||+||+++                 .+
T Consensus       101 v~e~~~~~~L~~~~~~~---~~~~~~~~~~~i~~qi~~~l~~LH~~~i~H~dikp~Nili~-----------------~~  160 (298)
T 3pls_A          101 LLPYMCHGDLLQFIRSP---QRNPTVKDLISFGLQVARGMEYLAEQKFVHRDLAARNCMLD-----------------ES  160 (298)
T ss_dssp             EECCCTTCBHHHHHHCT---TCCCBHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEC-----------------TT
T ss_pred             EEecccCCCHHHHHhcc---ccCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCcceEEEc-----------------CC
Confidence            99999999999999764   46789999999999999999999999999999999999998                 77


Q ss_pred             CCeEEeecCCccccccCC--CCccccccccCCCcccceeccCCCCCccchHhHHHHHHHHHHhCccccccccCCCC-Cce
Q 018699          204 QGLCLVDWGRGIDLHLFP--DNMEFEGDCRTSGFRCIEMQEKKPWKFQVDTYGLCAIVHMMLHNSYMEIEKKASPD-GGL  280 (351)
Q Consensus       204 ~~~~l~Dfg~a~~~~~~~--~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~p~~~~~~~~~-~~~  280 (351)
                      +.++|+|||++.......  .........+++.|+|||.+.+..++.++||||||+++|+|++|..|+........ ...
T Consensus       161 ~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~~~~~~~~~~~~~~~  240 (298)
T 3pls_A          161 FTVKVADFGLARDILDREYYSVQQHRHARLPVKWTALESLQTYRFTTKSDVWSFGVLLWELLTRGAPPYRHIDPFDLTHF  240 (298)
T ss_dssp             CCEEECCTTSSCTTTTGGGGCSCCSSCTTCGGGGSCHHHHTTCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCGGGHHHH
T ss_pred             CcEEeCcCCCcccccCCcccccccCcCCCCCccccChhhhccCCCChhhchhhHHHHHHHHhhCCCCCCccCCHHHHHHH
Confidence            889999999986432111  11223344678899999999999999999999999999999996655443222101 000


Q ss_pred             -eeecCcchhhhhHHHHHHHHHHHHhcCCCCCChHHHHHHHH
Q 018699          281 -VYLPKLSFKRYWKVELWKSLFTNLLNMSSGNDKEVLQNLQK  321 (351)
Q Consensus       281 -~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~~  321 (351)
                       ........+..++ +.+.+||.+||..||.+|||+.+++..
T Consensus       241 ~~~~~~~~~~~~~~-~~l~~li~~~l~~~p~~Rps~~~ll~~  281 (298)
T 3pls_A          241 LAQGRRLPQPEYCP-DSLYQVMQQCWEADPAVRPTFRVLVGE  281 (298)
T ss_dssp             HHTTCCCCCCTTCC-HHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             hhcCCCCCCCccch-HHHHHHHHHHccCChhhCcCHHHHHHH
Confidence             0011222333344 789999999999999999999998874

>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B

Probab=100.00  E-value=6.8e-41  Score=316.46  Aligned_cols=256  Identities=13%  Similarity=0.104  Sum_probs=196.0

Q ss_pred             eEEEEcCeeEEEEEEeeccCceEEEEEEecCCCCceEEEEecCCCCChHHHHHHHHHhhhccccccccccceeeecccCe
Q 018699           41 KTIEIGGKKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFPWEFYMYRQLDQRISGRERSSFGFAHRIHLYSDY  120 (351)
Q Consensus        41 ~~~~i~~~~Y~i~~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  120 (351)
                      ..+++..++|++.+.||+|+||+||+|.+  ..+..||||++...........++ ........|++++.+..+.. .+.
T Consensus       181 ~~~~i~~~~~~~~~~lG~G~fg~V~~~~~--~~~~~vavK~~~~~~~~~~~~~~E-~~~l~~l~h~~iv~l~~~~~-~~~  256 (454)
T 1qcf_A          181 DAWEIPRESLKLEKKLGAGQFGEVWMATY--NKHTKVAVKTMKPGSMSVEAFLAE-ANVMKTLQHDKLVKLHAVVT-KEP  256 (454)
T ss_dssp             TCSBCCGGGEEEEEEEECCSSEEEEEEEE--TTTEEEEEEEECTTSBCHHHHHHH-HHHHTTCCCTTBCCEEEEEC-SSS
T ss_pred             cceeechHHeEEEEEcccCCceEEEEEEE--CCccEEEEEEecCCCccHHHHHHH-HHHHhhCCCCCEeeEEEEEe-CCc
Confidence            34577789999999999999999999995  346789999998755433333333 33345567888888887765 567


Q ss_pred             eEEEEEecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeeccCCCCC
Q 018699          121 SILVCDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSGP  200 (351)
Q Consensus       121 ~~lv~e~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~~~~~  200 (351)
                      .|+||||+++|+|.+++....  +..++...++.++.||+.||.|||++||+||||||+||+++                
T Consensus       257 ~~lv~e~~~~g~L~~~l~~~~--~~~~~~~~~~~~~~qi~~~l~~LH~~~ivHrDlkp~Nill~----------------  318 (454)
T 1qcf_A          257 IYIITEFMAKGSLLDFLKSDE--GSKQPLPKLIDFSAQIAEGMAFIEQRNYIHRDLRAANILVS----------------  318 (454)
T ss_dssp             CEEEECCCTTCBHHHHHHSHH--HHTCCHHHHHHHHHHHHHHHHHHHHTTCCCSSCSGGGEEEC----------------
T ss_pred             cEEEEeecCCCcHHHHHHhcc--CCCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCCHHHEEEC----------------
Confidence            899999999999999998643  24678889999999999999999999999999999999999                


Q ss_pred             cccCCeEEeecCCccccccCCCCccccccccCCCcccceeccCCCCCccchHhHHHHHHHHHHh-CccccccccCCCCCc
Q 018699          201 WQDQGLCLVDWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQEKKPWKFQVDTYGLCAIVHMMLH-NSYMEIEKKASPDGG  279 (351)
Q Consensus       201 ~~~~~~~l~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~-g~~p~~~~~~~~~~~  279 (351)
                       .++.+||+|||++...... .........++..|+|||++.+..++.++|||||||++|+|++ |..||..........
T Consensus       319 -~~~~~kl~DFG~a~~~~~~-~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~t~g~~P~~~~~~~~~~~  396 (454)
T 1qcf_A          319 -ASLVCKIADFGLARVIEDN-EYTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIR  396 (454)
T ss_dssp             -TTCCEEECSTTGGGGBCCH-HHHTTCSSSSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHH
T ss_pred             -CCCcEEEeeCCCceEcCCC-ceeccCCCcccccccCHHHhccCCCCcHHHHHhHHHHHHHHHhCCCCCCCCCCHHHHHH
Confidence             7788999999998653210 0011122345678999999988889999999999999999999 999986533210000


Q ss_pred             -eeeecCcchhhhhHHHHHHHHHHHHhcCCCCCChHHHHHHHH
Q 018699          280 -LVYLPKLSFKRYWKVELWKSLFTNLLNMSSGNDKEVLQNLQK  321 (351)
Q Consensus       280 -~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~~  321 (351)
                       .......+.+..++ +.+.+||.+||..||++||++.+++..
T Consensus       397 ~i~~~~~~~~~~~~~-~~l~~li~~cl~~dp~~RPt~~~i~~~  438 (454)
T 1qcf_A          397 ALERGYRMPRPENCP-EELYNIMMRCWKNRPEERPTFEYIQSV  438 (454)
T ss_dssp             HHHHTCCCCCCTTSC-HHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             HHHcCCCCCCCCCCC-HHHHHHHHHHccCChhHCcCHHHHHHH
Confidence             00011122233344 789999999999999999999988753

>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ...

Probab=100.00  E-value=9.6e-41  Score=295.40  Aligned_cols=253  Identities=11%  Similarity=0.074  Sum_probs=191.7

Q ss_pred             EEEcCeeEEEEEEeeccCceEEEEEEecCCCCceEEEEecCCCCChHHHHHHHHHhhhccccccccccceeeecccCeeE
Q 018699           43 IEIGGKKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFPWEFYMYRQLDQRISGRERSSFGFAHRIHLYSDYSI  122 (351)
Q Consensus        43 ~~i~~~~Y~i~~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  122 (351)
                      +++..++|++.+.||+|+||+||+|.+  .+++.||+|.+...........+++ .......|++++....+.. .+..+
T Consensus         8 ~~v~~~~y~~~~~lg~G~~g~Vy~~~~--~~~~~vavK~~~~~~~~~~~~~~E~-~~l~~l~h~~i~~~~~~~~-~~~~~   83 (279)
T 1qpc_A            8 WEVPRETLKLVERLGAGQFGEVWMGYY--NGHTKVAVKSLKQGSMSPDAFLAEA-NLMKQLQHQRLVRLYAVVT-QEPIY   83 (279)
T ss_dssp             TBCCGGGEEEEEEEEEETTEEEEEEEE--TTTEEEEEEEECTTSSCHHHHHHHH-HHHHHCCCTTBCCEEEEEC-SSSCE
T ss_pred             cccCHHhhhheeeecCCCCeEEEEEEE--cCCcEEEEEEecCCcccHHHHHHHH-HHHHhCCCcCcceEEEEEc-CCCcE
Confidence            456678999999999999999999994  3567899999876544333332222 2333446778877777665 45689


Q ss_pred             EEEEecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeeccCCCCCcc
Q 018699          123 LVCDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSGPWQ  202 (351)
Q Consensus       123 lv~e~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~~~~~~~  202 (351)
                      +||||+++++|.+++....  +..+++..++.++.|++.||.|||++||+|+||+|+||+++                 .
T Consensus        84 ~v~e~~~~~~L~~~l~~~~--~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dikp~Nil~~-----------------~  144 (279)
T 1qpc_A           84 IITEYMENGSLVDFLKTPS--GIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVS-----------------D  144 (279)
T ss_dssp             EEEECCTTCBHHHHTTSHH--HHTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEC-----------------T
T ss_pred             EEEecCCCCCHHHHHhcCC--CCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHhhEEEc-----------------C
Confidence            9999999999999987542  23689999999999999999999999999999999999998                 6


Q ss_pred             cCCeEEeecCCccccccCCCCccccccccCCCcccceeccCCCCCccchHhHHHHHHHHHHh-CccccccccCCCCCce-
Q 018699          203 DQGLCLVDWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQEKKPWKFQVDTYGLCAIVHMMLH-NSYMEIEKKASPDGGL-  280 (351)
Q Consensus       203 ~~~~~l~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~-g~~p~~~~~~~~~~~~-  280 (351)
                      ++.++|+|||++...... .........++..|+|||.+.+..++.++||||||+++|+|++ |..||........... 
T Consensus       145 ~~~~kl~Dfg~~~~~~~~-~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~  223 (279)
T 1qpc_A          145 TLSCKIADFGLARLIEDN-EYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNL  223 (279)
T ss_dssp             TSCEEECCCTTCEECSSS-CEECCTTCCCCTTTSCHHHHHHCEECHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHH
T ss_pred             CCCEEECCCcccccccCc-ccccccCCCCccCccChhhhccCCCCchhhhHHHHHHHHHHHhCCCCCCcccCHHHHHHHH
Confidence            788999999998654321 1111233456778999999988888999999999999999999 8999865332100000 


Q ss_pred             eeecCcchhhhhHHHHHHHHHHHHhcCCCCCChHHHHHHH
Q 018699          281 VYLPKLSFKRYWKVELWKSLFTNLLNMSSGNDKEVLQNLQ  320 (351)
Q Consensus       281 ~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~  320 (351)
                      ........+...+ +.+.+||.+||..||++||++.+++.
T Consensus       224 ~~~~~~~~~~~~~-~~l~~li~~~l~~~p~~Rps~~~l~~  262 (279)
T 1qpc_A          224 ERGYRMVRPDNCP-EELYQLMRLCWKERPEDRPTFDYLRS  262 (279)
T ss_dssp             HTTCCCCCCTTCC-HHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             hcccCCCCccccc-HHHHHHHHHHhccChhhCCCHHHHHH
Confidence            0001112222334 78999999999999999999988875

>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...

Probab=100.00  E-value=1.9e-40  Score=313.07  Aligned_cols=256  Identities=13%  Similarity=0.093  Sum_probs=191.6

Q ss_pred             eEEEEcCeeEEEEEEeeccCceEEEEEEecCCCCceEEEEecCCCCChHHHHHHHHHhhhccccccccccceeeecccCe
Q 018699           41 KTIEIGGKKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFPWEFYMYRQLDQRISGRERSSFGFAHRIHLYSDY  120 (351)
Q Consensus        41 ~~~~i~~~~Y~i~~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  120 (351)
                      ..+++..++|++.+.||+|+||+||+|.++  .+..||||++...........++ ........|++++.+..+... +.
T Consensus       177 ~~~~i~~~~~~~~~~lG~G~fg~Vy~~~~~--~~~~vavK~~~~~~~~~~~~~~E-~~~l~~l~hp~iv~~~~~~~~-~~  252 (452)
T 1fmk_A          177 DAWEIPRESLRLEVKLGQGCFGEVWMGTWN--GTTRVAIKTLKPGTMSPEAFLQE-AQVMKKLRHEKLVQLYAVVSE-EP  252 (452)
T ss_dssp             TCSBCCGGGEEEEEEEEECSSCEEEEEEET--TTEEEEEEECCTTSSCHHHHHHH-HHHHHHCCCTTBCCEEEEECS-SS
T ss_pred             cccccChhHceeeeeecCCCCeEEEEEEEC--CCceEEEEEeccCCCCHHHHHHH-HHHHHhCCCCCEeeEEEEEcC-Cc
Confidence            345677899999999999999999999963  34679999998655433233322 223344567888888877654 67


Q ss_pred             eEEEEEecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeeccCCCCC
Q 018699          121 SILVCDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSGP  200 (351)
Q Consensus       121 ~~lv~e~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~~~~~  200 (351)
                      .++||||+++|+|.+++....  +..+++..++.++.|++.||+|||++||+||||||+||+++                
T Consensus       253 ~~iv~e~~~~gsL~~~l~~~~--~~~~~~~~~~~i~~qi~~~l~~LH~~~ivHrDlkp~Nill~----------------  314 (452)
T 1fmk_A          253 IYIVTEYMSKGSLLDFLKGET--GKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVG----------------  314 (452)
T ss_dssp             CEEEECCCTTCBHHHHHSHHH--HTTCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEC----------------
T ss_pred             eEEEehhhcCCCHHHHHHhcC--CCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCChhhEEEC----------------
Confidence            899999999999999997542  35689999999999999999999999999999999999998                


Q ss_pred             cccCCeEEeecCCccccccCCCCccccccccCCCcccceeccCCCCCccchHhHHHHHHHHHHh-CccccccccCCCCCc
Q 018699          201 WQDQGLCLVDWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQEKKPWKFQVDTYGLCAIVHMMLH-NSYMEIEKKASPDGG  279 (351)
Q Consensus       201 ~~~~~~~l~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~-g~~p~~~~~~~~~~~  279 (351)
                       .++.+||+|||++...... .........++..|+|||.+.+..++.++|||||||++|+|++ |..||..........
T Consensus       315 -~~~~~kl~DfG~a~~~~~~-~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~~~~~~  392 (452)
T 1fmk_A          315 -ENLVCKVADFGLARLIEDN-EYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLD  392 (452)
T ss_dssp             -GGGCEEECCCCTTC---------------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHH
T ss_pred             -CCCCEEECCCccceecCCC-ceecccCCcccccccCHhHHhcCCCCccccHHhHHHHHHHHHhCCCCCCCCCCHHHHHH
Confidence             7788999999998654311 1111233346778999999988889999999999999999999 899986533210000


Q ss_pred             -eeeecCcchhhhhHHHHHHHHHHHHhcCCCCCChHHHHHHHH
Q 018699          280 -LVYLPKLSFKRYWKVELWKSLFTNLLNMSSGNDKEVLQNLQK  321 (351)
Q Consensus       280 -~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~~  321 (351)
                       .......+.+..++ +.+.+||.+||+.||++|||+.+++..
T Consensus       393 ~i~~~~~~~~~~~~~-~~l~~li~~cl~~dP~~Rpt~~~l~~~  434 (452)
T 1fmk_A          393 QVERGYRMPCPPECP-ESLHDLMCQCWRKEPEERPTFEYLQAF  434 (452)
T ss_dssp             HHHTTCCCCCCTTSC-HHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             HHHcCCCCCCCCCCC-HHHHHHHHHHccCChhhCcCHHHHHHH
Confidence             00011122233344 789999999999999999999988753

>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A*

Probab=100.00  E-value=1.4e-39  Score=291.96  Aligned_cols=249  Identities=16%  Similarity=0.086  Sum_probs=190.6

Q ss_pred             EEEEEEeeccCceEEEEEEecCCCCceEEEEecCCCCC----hHHHHHHHHHhhhccccccccccceeeecccCeeEEEE
Q 018699           50 YQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFP----WEFYMYRQLDQRISGRERSSFGFAHRIHLYSDYSILVC  125 (351)
Q Consensus        50 Y~i~~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~~----~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~  125 (351)
                      |...+.||+|+||+||+|.+   +++.||+|++.....    .....+...........|++++.+..+....+..++||
T Consensus        33 ~~~~~~lg~G~~g~Vy~~~~---~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~  109 (307)
T 2nru_A           33 SVGGNKMGEGGFGVVYKGYV---NNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVY  109 (307)
T ss_dssp             TTTCCEEEECSSEEEEEEES---SSCEEEEEEECCCTTSCTTTHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEE
T ss_pred             cccCCccccCCCeEEEEEEE---CCceEEEEEEecccCcchHHHHHHHHHHHHHHHhcCCCCeEEEEEEEecCCceEEEE
Confidence            45568999999999999984   478899999865321    11222222233344556889999888888888999999


Q ss_pred             EecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeeccCCCCCcccCC
Q 018699          126 DYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSGPWQDQG  205 (351)
Q Consensus       126 e~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~~~~~~~~~~  205 (351)
                      ||+++++|.+++..... ...+++..++.++.|++.||.|||++||+|+||+|+||+++                 .++.
T Consensus       110 e~~~~~~L~~~l~~~~~-~~~~~~~~~~~i~~~i~~~l~~lH~~~i~H~dlkp~Nili~-----------------~~~~  171 (307)
T 2nru_A          110 VYMPNGSLLDRLSCLDG-TPPLSWHMRCKIAQGAANGINFLHENHHIHRDIKSANILLD-----------------EAFT  171 (307)
T ss_dssp             ECCTTCBHHHHHHTGGG-CCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEEC-----------------TTCC
T ss_pred             EecCCCcHHHHHHhccC-CCCCCHHHHHHHHHHHHHHHHHHhcCCeecCCCCHHHEEEc-----------------CCCc
Confidence            99999999999975422 45689999999999999999999999999999999999998                 7788


Q ss_pred             eEEeecCCccccccCCCCccccccccCCCcccceeccCCCCCccchHhHHHHHHHHHHhCccccccccCCCCCcee----
Q 018699          206 LCLVDWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQEKKPWKFQVDTYGLCAIVHMMLHNSYMEIEKKASPDGGLV----  281 (351)
Q Consensus       206 ~~l~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~p~~~~~~~~~~~~~----  281 (351)
                      ++|+|||++................|++.|+|||.+.+ .++.++||||||+++|+|++|..||............    
T Consensus       172 ~kl~Dfg~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~  250 (307)
T 2nru_A          172 AKISDFGLARASEKFAQTVMTSRIVGTTAYMAPEALRG-EITPKSDIYSFGVVLLEIITGLPAVDEHREPQLLLDIKEEI  250 (307)
T ss_dssp             EEECCCTTCEECCSCSSCEECSSCCSCGGGCCHHHHTT-EECTHHHHHHHHHHHHHHHHCCCSBCTTBSSSBTTHHHHHH
T ss_pred             EEEeecccccccccccccccccccCCCcCcCChHHhcC-CCCccchhHHHHHHHHHHHHCCCCcccCcchHHHHHHHHHh
Confidence            99999999875443322223344578999999998865 4788999999999999999999999765432110000    


Q ss_pred             -----------eecCcchhhhhHHHHHHHHHHHHhcCCCCCChHHHHHHHH
Q 018699          282 -----------YLPKLSFKRYWKVELWKSLFTNLLNMSSGNDKEVLQNLQK  321 (351)
Q Consensus       282 -----------~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~~  321 (351)
                                 .......+...+ +.+.++|.+||..||.+||++.+++++
T Consensus       251 ~~~~~~~~~~~~~~~~~~~~~~~-~~l~~li~~cl~~~p~~Rps~~~l~~~  300 (307)
T 2nru_A          251 EDEEKTIEDYIDKKMNDADSTSV-EAMYSVASQCLHEKKNKRPDIKKVQQL  300 (307)
T ss_dssp             HTTSCCHHHHSCSSCSCCCHHHH-HHHHHHHHHHTCSSTTTSCCHHHHHHH
T ss_pred             hhhhhhhhhhccccccccchHHH-HHHHHHHHHHcCCCcccCcCHHHHHHH
Confidence                       000111222233 778999999999999999999999875

>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A*

Probab=100.00  E-value=6.4e-39  Score=286.71  Aligned_cols=232  Identities=18%  Similarity=0.206  Sum_probs=176.2

Q ss_pred             eeEEEE-EEeeccCceEEEEEEecCCCCceEEEEecCCCCChHHHHHHHHHhhhccccccccccceeeecc----cCeeE
Q 018699           48 KKYQIK-GCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFPWEFYMYRQLDQRISGRERSSFGFAHRIHLY----SDYSI  122 (351)
Q Consensus        48 ~~Y~i~-~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~  122 (351)
                      ++|.+. +.||+|+||+||+|. +..+++.||+|++....    ...+++........|++++.+..++..    ....+
T Consensus        17 ~~y~~~~~~lg~G~~g~V~~~~-~~~~~~~vaiK~~~~~~----~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~   91 (299)
T 3m2w_A           17 DDYKVTSQVLGLGINGKVLQIF-NKRTQEKFALKMLQDCP----KARREVELHWRASQCPHIVRIVDVYENLYAGRKCLL   91 (299)
T ss_dssp             GTEEEEEEEEEEETTEEEEEEE-ETTTCCEEEEEEEECSH----HHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEE
T ss_pred             cchhhcCcccccCCCeEEEEEE-EcCCCcEEEEEEecccH----HHHHHHHHHHHhccCCCchhHHhhhhhhcCCCceEE
Confidence            567776 889999999999999 56788999999986432    222222222234467788887777654    67789


Q ss_pred             EEEEecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeeccCCCCCcc
Q 018699          123 LVCDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSGPWQ  202 (351)
Q Consensus       123 lv~e~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~~~~~~~  202 (351)
                      +||||+++++|.+++....  +..+++..++.++.|++.||.|||++||+|+||||+||+++..+              .
T Consensus        92 lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~--------------~  155 (299)
T 3m2w_A           92 IVMECLDGGELFSRIQDRG--DQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKR--------------P  155 (299)
T ss_dssp             EEECCCCSCBHHHHHHHCT--TCCCBHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESSSS--------------T
T ss_pred             EEEeecCCCcHHHHHHhcc--CCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEEecCC--------------C
Confidence            9999999999999998742  34799999999999999999999999999999999999999422              2


Q ss_pred             cCCeEEeecCCccccccCCCCccccccccCCCcccceeccCCCCCccchHhHHHHHHHHHHhCccccccccCCCC----C
Q 018699          203 DQGLCLVDWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQEKKPWKFQVDTYGLCAIVHMMLHNSYMEIEKKASPD----G  278 (351)
Q Consensus       203 ~~~~~l~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~p~~~~~~~~~----~  278 (351)
                      ++.++|+|||++....                        +..++.++|||||||++|+|++|..||........    .
T Consensus       156 ~~~~kl~Dfg~a~~~~------------------------~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~  211 (299)
T 3m2w_A          156 NAILKLTDFGFAKETT------------------------GEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMK  211 (299)
T ss_dssp             TCCEEECCCTTCEECT------------------------TCGGGGHHHHHHHHHHHHHHHHSSCSCCC-------CCSC
T ss_pred             CCcEEEeccccccccc------------------------cccCCchhhHHHHHHHHHHHHHCCCCCCCCcchhhhHHHH
Confidence            6779999999885321                        23457899999999999999999999965443211    0


Q ss_pred             ceeeecCcchh----hhhHHHHHHHHHHHHhcCCCCCChHHHHHHHHHHHH
Q 018699          279 GLVYLPKLSFK----RYWKVELWKSLFTNLLNMSSGNDKEVLQNLQKSFQD  325 (351)
Q Consensus       279 ~~~~~~~~~~~----~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~~~~~~  325 (351)
                      ..........+    ..++ +.+.+||.+||+.||++||++.|+++|||..
T Consensus       212 ~~~~~~~~~~~~~~~~~~~-~~~~~li~~~l~~dP~~Rps~~e~l~hp~~~  261 (299)
T 3m2w_A          212 TRIRMGQYEFPNPEWSEVS-EEVKMLIRNLLKTEPTQRMTITEFMNHPWIM  261 (299)
T ss_dssp             CSSCTTCCSSCHHHHTTSC-HHHHHHHHHHTCSSTTTSCCHHHHHTSHHHH
T ss_pred             HHHhhccccCCchhcccCC-HHHHHHHHHHcccChhhCCCHHHHhcChhhc
Confidence            00111111111    2234 7899999999999999999999999999843

>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens}

Probab=100.00  E-value=1.5e-39  Score=291.97  Aligned_cols=246  Identities=17%  Similarity=0.174  Sum_probs=181.7

Q ss_pred             EcCeeEEEEEEeeccCceEEEEEEecCCCCceEEEEecCCCCChHHHHHHHHHhhhccccccccccceeeecccCeeEEE
Q 018699           45 IGGKKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFPWEFYMYRQLDQRISGRERSSFGFAHRIHLYSDYSILV  124 (351)
Q Consensus        45 i~~~~Y~i~~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv  124 (351)
                      +..++|++.+.||+|+||+||+|++.   ++.||+|.+....  ....+......+....|++++.+..+..  +..++|
T Consensus         5 i~~~~~~~~~~lg~G~~g~V~~~~~~---~~~vavK~~~~~~--~~~~~~~E~~~l~~l~hp~iv~~~~~~~--~~~~lv   77 (307)
T 2eva_A            5 IDYKEIEVEEVVGRGAFGVVCKAKWR---AKDVAIKQIESES--ERKAFIVELRQLSRVNHPNIVKLYGACL--NPVCLV   77 (307)
T ss_dssp             CCGGGEEEEEEEECCSSSEEEEEEET---TEEEEEEECSSTT--HHHHHHHHHHHHHHCCCTTBCCEEEBCT--TTTEEE
T ss_pred             CCHhHeeeeeEeecCCCceEEEEEEC---CeeEEEEEecChh--HHHHHHHHHHHHhcCCCCCcCeEEEEEc--CCcEEE
Confidence            45678999999999999999999952   6789999987543  2222222223334456788877776554  457899


Q ss_pred             EEecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHH---CCceecCCCCCcEEEeecCCcceeeccCCCCCc
Q 018699          125 CDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHD---VGIIHGDFKPDNLLIRYARDELTVLDHDRSGPW  201 (351)
Q Consensus       125 ~e~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~---~~i~H~dl~p~Nill~~~~~~~~~~~~~~~~~~  201 (351)
                      |||+++++|.+++..... ...++...++.++.|++.|+.|||+   +||+|+||||+||+++                 
T Consensus        78 ~e~~~~~~L~~~l~~~~~-~~~~~~~~~~~~~~qi~~~l~~LH~~~~~~ivH~dlkp~NIll~-----------------  139 (307)
T 2eva_A           78 MEYAEGGSLYNVLHGAEP-LPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLV-----------------  139 (307)
T ss_dssp             EECCTTCBHHHHHHCSSS-EECCCHHHHHHHHHHHHHHHHHHHTCSSSCCCCCCCSGGGEEEE-----------------
T ss_pred             EEcCCCCCHHHHHhccCC-CCccCHHHHHHHHHHHHHHHHHHHhCCCCCeecCCCChhHEEEe-----------------
Confidence            999999999999986310 1246788999999999999999999   8999999999999998                 


Q ss_pred             ccCC-eEEeecCCccccccCCCCccccccccCCCcccceeccCCCCCccchHhHHHHHHHHHHhCccccccccCCCCC--
Q 018699          202 QDQG-LCLVDWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQEKKPWKFQVDTYGLCAIVHMMLHNSYMEIEKKASPDG--  278 (351)
Q Consensus       202 ~~~~-~~l~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~p~~~~~~~~~~--  278 (351)
                      .++. ++|+|||++....     .......||+.|+|||++.+..++.++||||||+++|+|++|..||.........  
T Consensus       140 ~~~~~~kl~Dfg~~~~~~-----~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~  214 (307)
T 2eva_A          140 AGGTVLKICDFGTACDIQ-----THMTNNKGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEIGGPAFRIM  214 (307)
T ss_dssp             TTTTEEEECCCCC-----------------CCTTSSCHHHHTCCCCCTHHHHHHHHHHHHHHHHTCCTTTTTCSSHHHHH
T ss_pred             CCCCEEEEcccccccccc-----cccccCCCCCceEChhhhCCCCCCcHHHHHHHHHHHHHHHHCCCCchhhCccHHHHH
Confidence            4554 7999999986432     1123346899999999999989999999999999999999999999743221000  


Q ss_pred             -ceeeecCcchhhhhHHHHHHHHHHHHhcCCCCCChHHHHHHHH
Q 018699          279 -GLVYLPKLSFKRYWKVELWKSLFTNLLNMSSGNDKEVLQNLQK  321 (351)
Q Consensus       279 -~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~~  321 (351)
                       ..........+...+ +.+.+||.+||+.||.+||++.+++++
T Consensus       215 ~~~~~~~~~~~~~~~~-~~l~~li~~~l~~dp~~Rps~~ell~~  257 (307)
T 2eva_A          215 WAVHNGTRPPLIKNLP-KPIESLMTRCWSKDPSQRPSMEEIVKI  257 (307)
T ss_dssp             HHHHTTCCCCCBTTCC-HHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             HHHhcCCCCCcccccC-HHHHHHHHHHhcCChhhCcCHHHHHHH
Confidence             000011122223334 789999999999999999999999875

>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A*

Probab=100.00  E-value=2e-39  Score=295.23  Aligned_cols=249  Identities=15%  Similarity=0.178  Sum_probs=186.2

Q ss_pred             CeeEEEEEEeeccCceEEEEEEecCCCCceEEEEecCCCCChHHHHHHHHHhhhccccccccccceeeecccC----eeE
Q 018699           47 GKKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFPWEFYMYRQLDQRISGRERSSFGFAHRIHLYSD----YSI  122 (351)
Q Consensus        47 ~~~Y~i~~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~  122 (351)
                      .++|++.+.||+|+||+||+|++   +++.||||++.............+... ....|++++.+..+....+    ..+
T Consensus        41 ~~~y~~~~~lg~G~~g~Vy~~~~---~~~~vavK~~~~~~~~~~~~e~~~~~~-~~l~h~ni~~~~~~~~~~~~~~~~~~  116 (342)
T 1b6c_B           41 ARTIVLQESIGKGRFGEVWRGKW---RGEEVAVKIFSSREERSWFREAEIYQT-VMLRHENILGFIAADNKDNGTWTQLW  116 (342)
T ss_dssp             HHHCEEEEEEEEETTEEEEEEEE---TTEEEEEEEECGGGHHHHHHHHHHHHH-SCCCCTTBCCEEEEEECCCSSCCCEE
T ss_pred             cccEEEEeeecCCCCcEEEEEEE---cCccEEEEEeCchhHHHHHHHHHHHHH-hhcCCCcEEEEEeeecccCCccceeE
Confidence            47899999999999999999995   378999999875432222111122221 1256788888877776554    789


Q ss_pred             EEEEecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHH--------HCCceecCCCCCcEEEeecCCcceeec
Q 018699          123 LVCDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLH--------DVGIIHGDFKPDNLLIRYARDELTVLD  194 (351)
Q Consensus       123 lv~e~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH--------~~~i~H~dl~p~Nill~~~~~~~~~~~  194 (351)
                      +||||+++++|.+++..     ..+++..++.++.|++.|+.|||        ++||+|+||||+||+++          
T Consensus       117 lv~e~~~~g~L~~~l~~-----~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dlkp~NIll~----------  181 (342)
T 1b6c_B          117 LVSDYHEHGSLFDYLNR-----YTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVK----------  181 (342)
T ss_dssp             EEECCCTTCBHHHHHHH-----CCBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCEEECSCCSGGGEEEC----------
T ss_pred             EEEeecCCCcHHHHHhc-----cCccHHHHHHHHHHHHHHHHHHHHHHhhhcccCCeeeCCCCHHHEEEC----------
Confidence            99999999999999976     46899999999999999999999        89999999999999999          


Q ss_pred             cCCCCCcccCCeEEeecCCccccccCCCCc--cccccccCCCcccceeccCCC------CCccchHhHHHHHHHHHHhC-
Q 018699          195 HDRSGPWQDQGLCLVDWGRGIDLHLFPDNM--EFEGDCRTSGFRCIEMQEKKP------WKFQVDTYGLCAIVHMMLHN-  265 (351)
Q Consensus       195 ~~~~~~~~~~~~~l~Dfg~a~~~~~~~~~~--~~~~~~g~~~y~aPE~~~~~~------~~~~~DiwslG~il~~l~~g-  265 (351)
                             .++.++|+|||++..........  ......||+.|+|||++.+..      ++.++|||||||++|+|++| 
T Consensus       182 -------~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~el~tg~  254 (342)
T 1b6c_B          182 -------KNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRC  254 (342)
T ss_dssp             -------TTSCEEECCCTTCEEEETTTTEEEECCCSCCCCGGGCCHHHHTSCCCTTCHHHHHHHHHHHHHHHHHHHHTTB
T ss_pred             -------CCCCEEEEECCCceeccccccccccccccCCcCcccCCHhhhcccccccccccCCcccHHHHHHHHHHHHhcc
Confidence                   77889999999986543221111  224457899999999997652      33689999999999999999 


Q ss_pred             ---------ccccccccCCCCCce-------eeecCcchhhhh----HHHHHHHHHHHHhcCCCCCChHHHHHHHH
Q 018699          266 ---------SYMEIEKKASPDGGL-------VYLPKLSFKRYW----KVELWKSLFTNLLNMSSGNDKEVLQNLQK  321 (351)
Q Consensus       266 ---------~~p~~~~~~~~~~~~-------~~~~~~~~~~~~----~~~~~~~li~~~L~~dP~~R~s~~e~l~~  321 (351)
                               ..||...........       ........+..+    ..+.+.+||.+||+.||++||++.+++.+
T Consensus       255 ~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~  330 (342)
T 1b6c_B          255 SIGGIHEDYQLPYYDLVPSDPSVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKT  330 (342)
T ss_dssp             CBTTBCCCCCCTTTTTSCSSCCHHHHHHHHTTSCCCCCCCGGGGTSHHHHHHHHHHHHHCCSSGGGSCCHHHHHHH
T ss_pred             CcCCcccccccCccccCcCcccHHHHHHHHHHHHhCCCCcccccchhHHHHHHHHHHHHhccChhhCCCHHHHHHH
Confidence                     677765432210000       001112222221    11678999999999999999999999876

>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A*

Probab=100.00  E-value=3.6e-40  Score=319.56  Aligned_cols=259  Identities=17%  Similarity=0.169  Sum_probs=192.1

Q ss_pred             CeeEEEEEEeeccCceEEEEEEecCCCCceEEEEecCCCCChH-HHHHHHHHhhhccccccccccceeeecc------cC
Q 018699           47 GKKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFPWE-FYMYRQLDQRISGRERSSFGFAHRIHLY------SD  119 (351)
Q Consensus        47 ~~~Y~i~~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~~~e-~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~  119 (351)
                      .++|++.+.||+|+||+||+|. +..+|+.||||++....... ...+...........|++++.+..+...      ++
T Consensus        13 ~grY~i~~~LG~G~fG~Vyla~-~~~tg~~VAVKvi~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~v~~~~~~~~~~~   91 (676)
T 3qa8_A           13 CGPWEMKERLGTGGFGYVLRWI-HQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAREVPDGLQKLAPND   91 (676)
T ss_dssp             ----CCCCCCCBCSSSBCCCCC-CTTTTCCEEECCCCSCCCHHHHHHHHHHHHHHHHCCBTTBCCEEECCTTTCCCCTTS
T ss_pred             CCCeEEEEEEeeCCCeEEEEEE-ECCCCcEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCceeeeecccccccCCC
Confidence            3789999999999999999999 56789999999987653322 2222222233344567888777766543      66


Q ss_pred             eeEEEEEecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeeccCCCC
Q 018699          120 YSILVCDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSG  199 (351)
Q Consensus       120 ~~~lv~e~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~~~~  199 (351)
                      ..++||||++|++|.+++..... ...+++..++.++.|++.|+.|||++||+||||+|+||+++.++            
T Consensus        92 ~~~LVmEy~~ggsL~~~L~~~~~-~~~lse~~i~~I~~QLl~aL~yLHs~gIVHrDLKP~NILl~~~g------------  158 (676)
T 3qa8_A           92 LPLLAMEYCEGGDLRKYLNQFEN-CCGLKEGPIRTLLSDISSALRYLHENRIIHRDLKPENIVLQPGP------------  158 (676)
T ss_dssp             SCCCEEECCSSCBHHHHHHSSSC-TTCCCSSHHHHHHHHHHHHHHHHHHTTBCCCCCCSTTEEEECCS------------
T ss_pred             eEEEEEEeCCCCCHHHHHHhccc-CCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCHHHeEeecCC------------
Confidence            78999999999999999986421 23689999999999999999999999999999999999999433            


Q ss_pred             CcccCCeEEeecCCccccccCCCCccccccccCCCcccceeccCCCCCccchHhHHHHHHHHHHhCcccccccc------
Q 018699          200 PWQDQGLCLVDWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQEKKPWKFQVDTYGLCAIVHMMLHNSYMEIEKK------  273 (351)
Q Consensus       200 ~~~~~~~~l~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~p~~~~~------  273 (351)
                        ....++|+|||.+....   .........|++.|+|||++.+..++.++|||||||++|+|++|..||....      
T Consensus       159 --~~~~vKL~DFG~a~~~~---~~~~~~~~~gt~~Y~APE~l~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~~~~~  233 (676)
T 3qa8_A          159 --QRLIHKIIDLGYAKELD---QGELCTEFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRPFLPNWQPVQWH  233 (676)
T ss_dssp             --SSCEEEECSCCCCCBTT---SCCCCCCCCSCCTTCSSCSSCCSCCSTTHHHHHHHHHHHHHHSSCSSCCSSCHHHHSS
T ss_pred             --CceeEEEcccccccccc---cccccccccCCcccCChHHhccCCCCchhHHHHHHHHHHHHHHCCCCCCcccchhhhh
Confidence              22348999999986543   2223345678999999999999999999999999999999999999985420      


Q ss_pred             --------------CCCCCceee----ecCcchhhhhHHHHHHHHHHHHhcCCCCCChHHHHHHHHHHHH
Q 018699          274 --------------ASPDGGLVY----LPKLSFKRYWKVELWKSLFTNLLNMSSGNDKEVLQNLQKSFQD  325 (351)
Q Consensus       274 --------------~~~~~~~~~----~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~~~~~~  325 (351)
                                    ....+...+    ..+...+..++ +.+.+||.+||.+||++||++.+++.|+|..
T Consensus       234 ~~i~~~~~~~~~~~~~l~g~~~~~~~lp~p~~l~~~ls-~~L~dLI~~mL~~DP~kRPTa~elL~hp~F~  302 (676)
T 3qa8_A          234 GKVREKSNEHIVVYDDLTGAVKFSSVLPTPNHLSGILA-GKLERWLQCMLMWHQRQRGTDPQNPNVGCFQ  302 (676)
T ss_dssp             TTCC------CCSCCCCSSSCCCCSSSCCSCCCCGGGH-HHHHHHHHHHSCSSCC---CCTTCCCCTTHH
T ss_pred             hhhhcccchhhhhhhhhccccccccccCCchhhchhhh-HHHHHHHHHHccCCHhhCcCHHHHhcCHHHH
Confidence                          000111111    11222333445 8899999999999999999999999988643

>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A*

Probab=100.00  E-value=1.6e-39  Score=305.18  Aligned_cols=268  Identities=16%  Similarity=0.122  Sum_probs=181.3

Q ss_pred             CeeEEEEEEeeccCceEEEEEEecCCCCceEEEEecCCCCChHHHHHHHHHhhhccccccccccceeeecccCeeEEEEE
Q 018699           47 GKKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFPWEFYMYRQLDQRISGRERSSFGFAHRIHLYSDYSILVCD  126 (351)
Q Consensus        47 ~~~Y~i~~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e  126 (351)
                      .+.|.+.+.||+|+||+||.+.  ..+|+.||||.+.......  ..+++........|++++........++..|+|||
T Consensus        14 ~~~~~~~~~LG~G~~g~V~~~~--~~~g~~vAvK~~~~~~~~~--~~~E~~~l~~l~~HpnIv~~~~~~~~~~~~~lv~E   89 (434)
T 2rio_A           14 KNLVVSEKILGYGSSGTVVFQG--SFQGRPVAVKRMLIDFCDI--ALMEIKLLTESDDHPNVIRYYCSETTDRFLYIALE   89 (434)
T ss_dssp             SSCEEEEEEEEECSTTCEEEEE--ESSSSEEEEEEEEGGGHHH--HHHHHHHHHHHTTSTTBCCEEEEEECSSEEEEEEC
T ss_pred             hheeeccCeEeeCCCeEEEEEE--EECCeEEEEEEEcHHHHHH--HHHHHHHHHhccCCCCcCeEEEEEecCCeEEEEEe
Confidence            4678889999999999998765  3568999999986543211  12222211122368888888888888899999999


Q ss_pred             ecCCCCHHHHHHHHHhhCCC---hhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeeccCCCCCccc
Q 018699          127 YLSQGTLQDAINSYVVIGKS---MEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSGPWQD  203 (351)
Q Consensus       127 ~~~~~sL~~~l~~~~~~~~~---l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~~~~~~~~  203 (351)
                      |+ +++|.+++.........   .++..++.++.||+.||.|||++||+||||||+||+++.++...    .+......+
T Consensus        90 ~~-~gsL~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDLkp~NILl~~~~~~~----~~~~~~~~~  164 (434)
T 2rio_A           90 LC-NLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHSLKIIHRDLKPQNILVSTSSRFT----ADQQTGAEN  164 (434)
T ss_dssp             CC-SEEHHHHHHTC------------CCHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEECCHHHH----SCCTTCCCS
T ss_pred             cC-CCCHHHHHhccCCCchhhhhccchhHHHHHHHHHHHHHHHHHCCccccCCChHhEEEecCcccc----cccccCCCc
Confidence            99 56999999863211111   12334578999999999999999999999999999998432000    000000134


Q ss_pred             CCeEEeecCCccccccCCCC--ccccccccCCCcccceeccC-------CCCCccchHhHHHHHHHHHHh-Ccccccccc
Q 018699          204 QGLCLVDWGRGIDLHLFPDN--MEFEGDCRTSGFRCIEMQEK-------KPWKFQVDTYGLCAIVHMMLH-NSYMEIEKK  273 (351)
Q Consensus       204 ~~~~l~Dfg~a~~~~~~~~~--~~~~~~~g~~~y~aPE~~~~-------~~~~~~~DiwslG~il~~l~~-g~~p~~~~~  273 (351)
                      +.++|+|||++.........  .......||+.|+|||++.+       ..++.++|||||||++|+|++ |..||....
T Consensus       165 ~~~kL~DFG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~  244 (434)
T 2rio_A          165 LRILISDFGLCKKLDSGQSSFRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKY  244 (434)
T ss_dssp             CEEEECCCTTCEECCC--------------CCTTSCHHHHSCCCTTSCCCCCCTHHHHHHHHHHHHHHHTTSCCTTCSTT
T ss_pred             eEEEEcccccceecCCCCccceeeecCCCCCCCccCHHHhccccccccccCcchhhhhHhHHHHHHHHHhCCCCCCCCch
Confidence            57999999998754322111  11234579999999999865       567899999999999999999 899986432


Q ss_pred             CCC----CCceeeec-CcchhhhhHHHHHHHHHHHHhcCCCCCChHHHHHHHHHHH
Q 018699          274 ASP----DGGLVYLP-KLSFKRYWKVELWKSLFTNLLNMSSGNDKEVLQNLQKSFQ  324 (351)
Q Consensus       274 ~~~----~~~~~~~~-~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~~~~~  324 (351)
                      ...    .+...... .......++ +.+.+||.+||+.||.+||++.++++|||.
T Consensus       245 ~~~~~i~~~~~~~~~~~~~~~~~~~-~~~~~li~~~L~~dP~~Rps~~eil~hp~f  299 (434)
T 2rio_A          245 SRESNIIRGIFSLDEMKCLHDRSLI-AEATDLISQMIDHDPLKRPTAMKVLRHPLF  299 (434)
T ss_dssp             THHHHHHHTCCCCCCCTTCCCHHHH-HHHHHHHHHHTCSSGGGSCCHHHHHTSGGG
T ss_pred             hhHHHHhcCCCCcccccccccccch-HHHHHHHHHHhhCChhhCCCHHHHHhCCcc
Confidence            210    01111111 111122233 789999999999999999999999999863

>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7

Probab=100.00  E-value=6.7e-40  Score=315.39  Aligned_cols=256  Identities=13%  Similarity=0.088  Sum_probs=194.6

Q ss_pred             eEEEEcCeeEEEEEEeeccCceEEEEEEecCCCCceEEEEecCCCCChHHHHHHHHHhhhccccccccccceeeecccCe
Q 018699           41 KTIEIGGKKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFPWEFYMYRQLDQRISGRERSSFGFAHRIHLYSDY  120 (351)
Q Consensus        41 ~~~~i~~~~Y~i~~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  120 (351)
                      ..+++..++|++.+.||+|+||+||+|.++  .+..||||++...........+++ ..+....|++++.+..+... +.
T Consensus       260 ~~~~i~~~~~~~~~~lG~G~fg~Vy~~~~~--~~~~vavK~~~~~~~~~~~~~~E~-~~l~~l~hpniv~~~~~~~~-~~  335 (535)
T 2h8h_A          260 DAWEIPRESLRLEVKLGQGCFGEVWMGTWN--GTTRVAIKTLKPGTMSPEAFLQEA-QVMKKLRHEKLVQLYAVVSE-EP  335 (535)
T ss_dssp             TCSBCCGGGEEEEEEEEECSSEEEEEEEET--TTEEEEEEEECTTSSCHHHHHHHH-HHHHHCCCTTBCCEEEEECS-SS
T ss_pred             cceecchhhhhhheecccCCCeEEEEEEEC--CCceEEEEEeCCCCCCHHHHHHHH-HHHHhCCCCCEeeEEEEEee-cc
Confidence            346678899999999999999999999963  346799999886554333333322 23344567888888877654 67


Q ss_pred             eEEEEEecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeeccCCCCC
Q 018699          121 SILVCDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSGP  200 (351)
Q Consensus       121 ~~lv~e~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~~~~~  200 (351)
                      .|+||||+.+++|.+++....  +..+++..++.++.||+.||.|||++||+||||||+||+++                
T Consensus       336 ~~lv~e~~~~gsL~~~l~~~~--~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlkp~NIll~----------------  397 (535)
T 2h8h_A          336 IYIVTEYMSKGSLLDFLKGET--GKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVG----------------  397 (535)
T ss_dssp             CEEEECCCTTEEHHHHHSHHH--HTTCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEC----------------
T ss_pred             ceEeeehhcCCcHHHHHhhcC--CCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCCHhhEEEc----------------
Confidence            899999999999999997542  35688999999999999999999999999999999999998                


Q ss_pred             cccCCeEEeecCCccccccCCCCccccccccCCCcccceeccCCCCCccchHhHHHHHHHHHHh-CccccccccCCCCCc
Q 018699          201 WQDQGLCLVDWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQEKKPWKFQVDTYGLCAIVHMMLH-NSYMEIEKKASPDGG  279 (351)
Q Consensus       201 ~~~~~~~l~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~-g~~p~~~~~~~~~~~  279 (351)
                       .++.+||+|||++...... .........++..|+|||++.+..++.++|||||||++|+|++ |..||..........
T Consensus       398 -~~~~~kl~DFG~a~~~~~~-~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~t~g~~P~~~~~~~~~~~  475 (535)
T 2h8h_A          398 -ENLVCKVADFGLARLIEDN-EYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLD  475 (535)
T ss_dssp             -GGGCEEECCTTSTTTCCCH-HHHTTCSTTSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTTCCSSTTCCHHHHHH
T ss_pred             -CCCcEEEcccccceecCCC-ceecccCCcCcccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHH
Confidence             7788999999998643210 0011123345678999999988889999999999999999999 899986533210000


Q ss_pred             e-eeecCcchhhhhHHHHHHHHHHHHhcCCCCCChHHHHHHHH
Q 018699          280 L-VYLPKLSFKRYWKVELWKSLFTNLLNMSSGNDKEVLQNLQK  321 (351)
Q Consensus       280 ~-~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~~  321 (351)
                      . ......+.+..++ +.+.+||.+||+.||++||++.+++..
T Consensus       476 ~i~~~~~~~~~~~~~-~~l~~li~~cl~~dP~~RPt~~~l~~~  517 (535)
T 2h8h_A          476 QVERGYRMPCPPECP-ESLHDLMCQCWRKEPEERPTFEYLQAF  517 (535)
T ss_dssp             HHHTTCCCCCCTTCC-HHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             HHHcCCCCCCCCCCC-HHHHHHHHHHcCCChhHCcCHHHHHHH
Confidence            0 0001112233344 789999999999999999999988753

>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}

Probab=100.00  E-value=1.1e-38  Score=315.66  Aligned_cols=245  Identities=18%  Similarity=0.238  Sum_probs=190.9

Q ss_pred             cCeeEEEEEEeeccCceEEEEEEecCCCCceEEEEecCCCCChH-HHHHHHHHhhhccccccccccceeeecccCe----
Q 018699           46 GGKKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFPWE-FYMYRQLDQRISGRERSSFGFAHRIHLYSDY----  120 (351)
Q Consensus        46 ~~~~Y~i~~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~~~e-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----  120 (351)
                      ..++|++.+.||+|+||+||+|.+...+++.||||++......+ ...+......+....|++++.+..++...+.    
T Consensus        78 ~~~~y~i~~~lg~G~~g~Vy~a~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~  157 (681)
T 2pzi_A           78 VAGQYEVKGCIAHGGLGWIYLALDRNVNGRPVVLKGLVHSGDAEAQAMAMAERQFLAEVVHPSIVQIFNFVEHTDRHGDP  157 (681)
T ss_dssp             ETTTEEEEEEEEEETTEEEEEEEEGGGTTEEEEEEESCSSCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEEECTTSCE
T ss_pred             eCCceEEEEEEeeCCCeEEEEEEEcCCCCcEEEEEEeCccCCHHHHHHHHHHHHHHHhcCCCCcCeEeeeEeecCCCCCc
Confidence            35899999999999999999999644478999999987543322 2222333344556678899888887765444    


Q ss_pred             -eEEEEEecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeeccCCCC
Q 018699          121 -SILVCDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSG  199 (351)
Q Consensus       121 -~~lv~e~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~~~~  199 (351)
                       .|+||||++|++|.+++.      ..+++..++.++.||+.||.|||++||+||||||+||+++               
T Consensus       158 ~~~lv~E~~~g~~L~~~~~------~~l~~~~~~~~~~qi~~aL~~lH~~giiHrDlkp~NIll~---------------  216 (681)
T 2pzi_A          158 VGYIVMEYVGGQSLKRSKG------QKLPVAEAIAYLLEILPALSYLHSIGLVYNDLKPENIMLT---------------  216 (681)
T ss_dssp             EEEEEEECCCCEECC----------CCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEC---------------
T ss_pred             eeEEEEEeCCCCcHHHHHh------CCCCHHHHHHHHHHHHHHHHHHHHCCCeecccChHHeEEe---------------
Confidence             699999999999988764      3689999999999999999999999999999999999998               


Q ss_pred             CcccCCeEEeecCCccccccCCCCccccccccCCCcccceeccCCCCCccchHhHHHHHHHHHHhCccccccccCCCCCc
Q 018699          200 PWQDQGLCLVDWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQEKKPWKFQVDTYGLCAIVHMMLHNSYMEIEKKASPDGG  279 (351)
Q Consensus       200 ~~~~~~~~l~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~p~~~~~~~~~~~  279 (351)
                        . +.+||+|||++.....      .....||+.|+|||++.+.. +.++|||||||++|+|++|..||........  
T Consensus       217 --~-~~~kl~DFG~a~~~~~------~~~~~gt~~y~aPE~~~~~~-~~~sDi~slG~~l~~l~~g~~~~~~~~~~~~--  284 (681)
T 2pzi_A          217 --E-EQLKLIDLGAVSRINS------FGYLYGTPGFQAPEIVRTGP-TVATDIYTVGRTLAALTLDLPTRNGRYVDGL--  284 (681)
T ss_dssp             --S-SCEEECCCTTCEETTC------CSCCCCCTTTSCTTHHHHCS-CHHHHHHHHHHHHHHHHSCCCEETTEECSSC--
T ss_pred             --C-CcEEEEecccchhccc------CCccCCCccccCHHHHcCCC-CCceehhhhHHHHHHHHhCCCCCcccccccc--
Confidence              3 3699999999865432      14456899999999987654 8899999999999999999988875432211  


Q ss_pred             eeeecCcchhhhhHHHHHHHHHHHHhcCCCCCChHHHHHHHHHHHHHHh
Q 018699          280 LVYLPKLSFKRYWKVELWKSLFTNLLNMSSGNDKEVLQNLQKSFQDYLC  328 (351)
Q Consensus       280 ~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~~~~~~~~~  328 (351)
                          + ...+.....+.+.+||.+||++||.+||++.+++.++|...+.
T Consensus       285 ----~-~~~~~~~~~~~l~~li~~~l~~dP~~R~~~~~~l~~~l~~~~~  328 (681)
T 2pzi_A          285 ----P-EDDPVLKTYDSYGRLLRRAIDPDPRQRFTTAEEMSAQLTGVLR  328 (681)
T ss_dssp             ----C-TTCHHHHHCHHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHHHH
T ss_pred             ----c-ccccccccCHHHHHHHhhhccCChhhCCCHHHHHHHHHHHHHH
Confidence                0 1111111117789999999999999999999999999877654

>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens}

Probab=100.00  E-value=5e-39  Score=313.67  Aligned_cols=256  Identities=11%  Similarity=0.036  Sum_probs=190.7

Q ss_pred             EEEcCeeEEEEE-EeeccCceEEEEEEec-CCCCceEEEEecCCCCCh-HHHHHHHHHhhhccccccccccceeeecccC
Q 018699           43 IEIGGKKYQIKG-CAGQGGFAKVFKAYVN-GDPEDVVALKIQKPAFPW-EFYMYRQLDQRISGRERSSFGFAHRIHLYSD  119 (351)
Q Consensus        43 ~~i~~~~Y~i~~-~lg~G~~g~V~~a~~~-~~~~~~vaiK~~~~~~~~-e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  119 (351)
                      +.+..+++.+.+ .||+|+||+||+|.+. ..++..||||++...... ....+......+....|++++.+..++.. +
T Consensus       330 ~~~~~~~~~~~~~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~il~~l~hpniv~l~~~~~~-~  408 (613)
T 2ozo_A          330 LFLKRDNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQA-E  408 (613)
T ss_dssp             SBCCTTSEEEEEEEEEECSSSEEEEEEEECSSCEEEEEEEECCCCCSSTTHHHHHHHHHHHTTCCCTTBCCEEEEEES-S
T ss_pred             eeccccceeEcCcEEecCCCcEEEEEEEecCCCcEEEEEEEcCCCCChHHHHHHHHHHHHHHhCCCCCEeeEEEEecc-C
Confidence            445566777777 8999999999999863 245678999998765322 22222223333455678888888887764 5


Q ss_pred             eeEEEEEecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeeccCCCC
Q 018699          120 YSILVCDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSG  199 (351)
Q Consensus       120 ~~~lv~e~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~~~~  199 (351)
                      ..++||||+++|+|.+++...   +..+++..++.++.||+.||.|||++||+||||||+||+++               
T Consensus       409 ~~~lv~E~~~~g~L~~~l~~~---~~~l~~~~~~~i~~qi~~~L~~LH~~~iiHrDlkp~NILl~---------------  470 (613)
T 2ozo_A          409 ALMLVMEMAGGGPLHKFLVGK---REEIPVSNVAELLHQVSMGMKYLEEKNFVHRNLAARNVLLV---------------  470 (613)
T ss_dssp             SEEEEEECCTTCBHHHHHTTC---TTTSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEE---------------
T ss_pred             CeEEEEEeCCCCcHHHHHhhc---cCCCCHHHHHHHHHHHHHHHHHHHHCCEEcCcCCHHHEEEc---------------
Confidence            689999999999999998653   45789999999999999999999999999999999999999               


Q ss_pred             CcccCCeEEeecCCccccccCCCC-ccccccccCCCcccceeccCCCCCccchHhHHHHHHHHHHh-CccccccccCCCC
Q 018699          200 PWQDQGLCLVDWGRGIDLHLFPDN-MEFEGDCRTSGFRCIEMQEKKPWKFQVDTYGLCAIVHMMLH-NSYMEIEKKASPD  277 (351)
Q Consensus       200 ~~~~~~~~l~Dfg~a~~~~~~~~~-~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~-g~~p~~~~~~~~~  277 (351)
                        .++.+||+|||++......... .......+++.|+|||++.+..++.++|||||||++|+|++ |..||........
T Consensus       471 --~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~~~~  548 (613)
T 2ozo_A          471 --NRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEV  548 (613)
T ss_dssp             --ETTEEEECCCSTTTTCC--------------CCTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCSHHH
T ss_pred             --CCCcEEEeeccCcccccCCCceeeeccCCCCccceeCHhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCCHHHH
Confidence              6778999999999754321111 11122335678999999998899999999999999999998 9999976443210


Q ss_pred             Ccee-eecCcchhhhhHHHHHHHHHHHHhcCCCCCChHHHHHHH
Q 018699          278 GGLV-YLPKLSFKRYWKVELWKSLFTNLLNMSSGNDKEVLQNLQ  320 (351)
Q Consensus       278 ~~~~-~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~  320 (351)
                      ...+ .......+..++ +.+.+||.+||+.||++||++.+++.
T Consensus       549 ~~~i~~~~~~~~p~~~~-~~l~~li~~cl~~dP~~RPs~~~l~~  591 (613)
T 2ozo_A          549 MAFIEQGKRMECPPECP-PELYALMSDCWIYKWEDRPDFLTVEQ  591 (613)
T ss_dssp             HHHHHTTCCCCCCTTCC-HHHHHHHHHTTCSSTTTSCCHHHHHH
T ss_pred             HHHHHcCCCCCCCCcCC-HHHHHHHHHHcCCChhHCcCHHHHHH
Confidence            0000 011223334444 88999999999999999999999865

>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A*

Probab=100.00  E-value=6e-39  Score=315.12  Aligned_cols=256  Identities=14%  Similarity=0.109  Sum_probs=191.8

Q ss_pred             EEEcCeeEEEEEEeeccCceEEEEEEecC--CCCceEEEEecCCCCChHH-HHHHHHHhhhccccccccccceeeecccC
Q 018699           43 IEIGGKKYQIKGCAGQGGFAKVFKAYVNG--DPEDVVALKIQKPAFPWEF-YMYRQLDQRISGRERSSFGFAHRIHLYSD  119 (351)
Q Consensus        43 ~~i~~~~Y~i~~~lg~G~~g~V~~a~~~~--~~~~~vaiK~~~~~~~~e~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  119 (351)
                      ..+..++|++.+.||+|+||+||+|.+..  ..+..||+|.+........ +.+...........|++++.+..+.. .+
T Consensus       385 ~~i~~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~-~~  463 (656)
T 2j0j_A          385 YEIQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVIT-EN  463 (656)
T ss_dssp             TBCCGGGEEEEEEEECCSSCCEEEEEECCSSSCCEEEEEEECSSTTCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEC-SS
T ss_pred             cccccccEEEeeEEeeCCCEEEEEEEEecCCCccEEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEe-cC
Confidence            44566899999999999999999999632  3457899999876433221 22222223344557888888887764 46


Q ss_pred             eeEEEEEecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeeccCCCC
Q 018699          120 YSILVCDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSG  199 (351)
Q Consensus       120 ~~~lv~e~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~~~~  199 (351)
                      ..|+||||+++++|.+++...   +..+++..++.++.|++.||.|||++||+||||||+||+++               
T Consensus       464 ~~~lv~E~~~~g~L~~~l~~~---~~~l~~~~~~~i~~qi~~aL~~LH~~givHrDikp~NILl~---------------  525 (656)
T 2j0j_A          464 PVWIIMELCTLGELRSFLQVR---KFSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVS---------------  525 (656)
T ss_dssp             SCEEEEECCTTCBHHHHHHHT---TTTCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEE---------------
T ss_pred             ceEEEEEcCCCCcHHHHHHhc---cCCCCHHHHHHHHHHHHHHHHHHHhCCccccccchHhEEEe---------------
Confidence            689999999999999999864   45789999999999999999999999999999999999999               


Q ss_pred             CcccCCeEEeecCCccccccCCCCccccccccCCCcccceeccCCCCCccchHhHHHHHHHHHHh-CccccccccCCCCC
Q 018699          200 PWQDQGLCLVDWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQEKKPWKFQVDTYGLCAIVHMMLH-NSYMEIEKKASPDG  278 (351)
Q Consensus       200 ~~~~~~~~l~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~-g~~p~~~~~~~~~~  278 (351)
                        .++.++|+|||++...... .........+++.|+|||++.+..++.++|||||||++|+|++ |..||.........
T Consensus       526 --~~~~vkL~DFG~a~~~~~~-~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~~~~~~  602 (656)
T 2j0j_A          526 --SNDCVKLGDFGLSRYMEDS-TYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVI  602 (656)
T ss_dssp             --ETTEEEECCCCCCCSCCC-----------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHH
T ss_pred             --CCCCEEEEecCCCeecCCC-cceeccCCCCCcceeCHHHhcCCCCCchhhHHHHHHHHHHHHHcCCCCCCCCCHHHHH
Confidence              6778999999998654311 1111223456788999999988899999999999999999997 89998654321000


Q ss_pred             -ceeeecCcchhhhhHHHHHHHHHHHHhcCCCCCChHHHHHHHH
Q 018699          279 -GLVYLPKLSFKRYWKVELWKSLFTNLLNMSSGNDKEVLQNLQK  321 (351)
Q Consensus       279 -~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~~  321 (351)
                       ........+.+..++ +.+.+||.+||..||++||++.+++..
T Consensus       603 ~~i~~~~~~~~~~~~~-~~l~~li~~~l~~dP~~RPs~~el~~~  645 (656)
T 2j0j_A          603 GRIENGERLPMPPNCP-PTLYSLMTKCWAYDPSRRPRFTELKAQ  645 (656)
T ss_dssp             HHHHHTCCCCCCTTCC-HHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             HHHHcCCCCCCCcccc-HHHHHHHHHHcCCChhHCcCHHHHHHH
Confidence             000011222333444 789999999999999999999998764

>4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A*

Probab=100.00  E-value=4.8e-39  Score=314.66  Aligned_cols=255  Identities=13%  Similarity=0.056  Sum_probs=188.4

Q ss_pred             EEcCeeEEEE-EEeeccCceEEEEEEe-cCCCCceEEEEecCCCCChH--HHHHHHHHhhhccccccccccceeeecccC
Q 018699           44 EIGGKKYQIK-GCAGQGGFAKVFKAYV-NGDPEDVVALKIQKPAFPWE--FYMYRQLDQRISGRERSSFGFAHRIHLYSD  119 (351)
Q Consensus        44 ~i~~~~Y~i~-~~lg~G~~g~V~~a~~-~~~~~~~vaiK~~~~~~~~e--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  119 (351)
                      .+....+.+. +.||+|+||+||+|.+ ...+++.||||++.......  ...+......+....|++++.+..+.. .+
T Consensus       364 ~~~~~~~~l~~~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~-~~  442 (635)
T 4fl3_A          364 YLDRKLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICE-AE  442 (635)
T ss_dssp             BCCGGGEEEEEEEEEECSSEEEEEEEEECSSCEEEEEEEEECGGGGCGGGHHHHHHHHHHHHHCCCTTBCCEEEEEE-SS
T ss_pred             cccchhccccCCEeccCCCEEEEEEEEcCCCcceEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEe-cC
Confidence            3444556554 4899999999999965 34567899999987543221  122222223334456888888888775 45


Q ss_pred             eeEEEEEecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeeccCCCC
Q 018699          120 YSILVCDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSG  199 (351)
Q Consensus       120 ~~~lv~e~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~~~~  199 (351)
                      ..++||||+++++|.+++..    +..+++..++.++.||+.||.|||++||+||||||+||+++               
T Consensus       443 ~~~lv~E~~~~g~L~~~l~~----~~~l~~~~~~~i~~qi~~~L~yLH~~~iiHrDLkp~NILl~---------------  503 (635)
T 4fl3_A          443 SWMLVMEMAELGPLNKYLQQ----NRHVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLV---------------  503 (635)
T ss_dssp             SEEEEEECCTTEEHHHHHHH----CTTCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEE---------------
T ss_pred             CEEEEEEccCCCCHHHHHhh----CCCCCHHHHHHHHHHHHHHHHHHHHCCEeCCCCChHhEEEe---------------
Confidence            57899999999999999976    57899999999999999999999999999999999999999               


Q ss_pred             CcccCCeEEeecCCccccccCCCC-ccccccccCCCcccceeccCCCCCccchHhHHHHHHHHHHh-CccccccccCCCC
Q 018699          200 PWQDQGLCLVDWGRGIDLHLFPDN-MEFEGDCRTSGFRCIEMQEKKPWKFQVDTYGLCAIVHMMLH-NSYMEIEKKASPD  277 (351)
Q Consensus       200 ~~~~~~~~l~Dfg~a~~~~~~~~~-~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~-g~~p~~~~~~~~~  277 (351)
                        .++.+||+|||++......... .......+++.|+|||++.+..++.++|||||||++|+|++ |..||........
T Consensus       504 --~~~~~kL~DFGla~~~~~~~~~~~~~~~~~~t~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~~~~  581 (635)
T 4fl3_A          504 --TQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEV  581 (635)
T ss_dssp             --ETTEEEECCTTHHHHTTC-------------CGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHH
T ss_pred             --CCCCEEEEEcCCccccccCccccccccCCCCceeeeChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHHH
Confidence              6777999999998654322111 11223346788999999999999999999999999999998 9999975433210


Q ss_pred             Cc-eeeecCcchhhhhHHHHHHHHHHHHhcCCCCCChHHHHHHHH
Q 018699          278 GG-LVYLPKLSFKRYWKVELWKSLFTNLLNMSSGNDKEVLQNLQK  321 (351)
Q Consensus       278 ~~-~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~~  321 (351)
                      .. .........+..++ +.+.+||.+||..||++||++.+++..
T Consensus       582 ~~~i~~~~~~~~p~~~~-~~l~~li~~cl~~dP~~RPs~~~l~~~  625 (635)
T 4fl3_A          582 TAMLEKGERMGCPAGCP-REMYDLMNLCWTYDVENRPGFAAVELR  625 (635)
T ss_dssp             HHHHHTTCCCCCCTTCC-HHHHHHHHHHTCSSTTTSCCHHHHHHH
T ss_pred             HHHHHcCCCCCCCCCCC-HHHHHHHHHHcCCCHhHCcCHHHHHHH
Confidence            00 00011222334444 789999999999999999999998764

>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens}

Probab=100.00  E-value=2.2e-39  Score=292.10  Aligned_cols=254  Identities=12%  Similarity=0.098  Sum_probs=187.4

Q ss_pred             CcceEEEEcCeeEEEEEEeeccCceEEEEEEecCCCCceEEEEecCCCCChH--HHHHHHHHhhhccccccccccceeee
Q 018699           38 SRNKTIEIGGKKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFPWE--FYMYRQLDQRISGRERSSFGFAHRIH  115 (351)
Q Consensus        38 ~~~~~~~i~~~~Y~i~~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~~~e--~~~~~~~~~~~~~~~~~~~~~~~~~~  115 (351)
                      .......+..++|++.+.||+|+||+||+|.+.    ..||+|++......+  ...+...........|++++.+..+.
T Consensus        23 ~~~~~~~i~~~~~~~~~~lg~G~~g~V~~~~~~----~~~avk~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~   98 (319)
T 2y4i_B           23 IFLQEWDIPFEQLEIGELIGKGRFGQVYHGRWH----GEVAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLFMGAC   98 (319)
T ss_dssp             CCGGGSSSCCSCEECCCBCCCSSSSEEEEEEES----SSEEEEECCCCSCCCCCCCCCCTTGGGGTTCCCTTBCCCCEEE
T ss_pred             cccccccCCHHHeEEeeEeccCCceEEEEEEEc----CeEEEEEeecCCCCHHHHHHHHHHHHHHhcCCCCCEeEEEEEE
Confidence            334455667789999999999999999999952    248999876432111  01111112233445678888888888


Q ss_pred             cccCeeEEEEEecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeecc
Q 018699          116 LYSDYSILVCDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDH  195 (351)
Q Consensus       116 ~~~~~~~lv~e~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~  195 (351)
                      ...+..++||||+++++|.+++...   +..+++..++.++.|++.|+.|||++||+|+||+|+||+++           
T Consensus        99 ~~~~~~~iv~e~~~~~~L~~~l~~~---~~~~~~~~~~~i~~qi~~al~~lH~~~i~H~dlkp~NIl~~-----------  164 (319)
T 2y4i_B           99 MSPPHLAIITSLCKGRTLYSVVRDA---KIVLDVNKTRQIAQEIVKGMGYLHAKGILHKDLKSKNVFYD-----------  164 (319)
T ss_dssp             ECSSCEEEECBCCCSEEHHHHTTSS---CCCCCSHHHHHHHHHHHHHHHHHHHTTCCCCCCCSTTEEEC-----------
T ss_pred             ecCCceEEEeecccCCcHHHHHHhc---CCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCChhhEEEe-----------
Confidence            8888999999999999999999763   34789999999999999999999999999999999999997           


Q ss_pred             CCCCCcccCCeEEeecCCccccccCC---CCccccccccCCCcccceeccC---------CCCCccchHhHHHHHHHHHH
Q 018699          196 DRSGPWQDQGLCLVDWGRGIDLHLFP---DNMEFEGDCRTSGFRCIEMQEK---------KPWKFQVDTYGLCAIVHMML  263 (351)
Q Consensus       196 ~~~~~~~~~~~~l~Dfg~a~~~~~~~---~~~~~~~~~g~~~y~aPE~~~~---------~~~~~~~DiwslG~il~~l~  263 (351)
                             ++.++|+|||++.......   .........|++.|+|||++.+         ..++.++|||||||++|+|+
T Consensus       165 -------~~~~~l~Dfg~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~  237 (319)
T 2y4i_B          165 -------NGKVVITDFGLFSISGVLQAGRREDKLRIQNGWLCHLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYELH  237 (319)
T ss_dssp             ---------CCEECCCSCCC----------CCSCBCCSGGGGTSCHHHHSCBSCC--CCCSCCCHHHHHHHHHHHHHHHH
T ss_pred             -------CCCEEEeecCCccccccccccccccccccCCCcccccChHHhhhccccccccccCCCchhhHHHHHHHHHHHH
Confidence                   2468999999876432211   1122334468899999999864         45788999999999999999


Q ss_pred             hCccccccccCCC------CCceeeecCcchhhhhHHHHHHHHHHHHhcCCCCCChHHHHHHHH
Q 018699          264 HNSYMEIEKKASP------DGGLVYLPKLSFKRYWKVELWKSLFTNLLNMSSGNDKEVLQNLQK  321 (351)
Q Consensus       264 ~g~~p~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~~  321 (351)
                      +|..||.......      .+.........    ++ ..+.++|.+||..||++||++.+++..
T Consensus       238 ~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~----~~-~~l~~li~~~l~~~p~~Rpt~~~l~~~  296 (319)
T 2y4i_B          238 AREWPFKTQPAEAIIWQMGTGMKPNLSQIG----MG-KEISDILLFCWAFEQEERPTFTKLMDM  296 (319)
T ss_dssp             HSSCSSSSCCHHHHHHHHHTTCCCCCCCSS----CC-TTHHHHHHHHHCSSTTTSCCHHHHHHH
T ss_pred             hCCCCCCCCCHHHHHHHhccCCCCCCCcCC----CC-HHHHHHHHHHhcCChhhCcCHHHHHHH
Confidence            9999986543210      01000011111    22 678999999999999999999998864

>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A

Probab=100.00  E-value=2.6e-37  Score=274.46  Aligned_cols=222  Identities=14%  Similarity=0.075  Sum_probs=172.2

Q ss_pred             EcCeeEEEEEEeeccCceEEEEEEecCCCCceEEEEecCCCCChHH---HHHHHHHhhhccccccccccceeeecccCee
Q 018699           45 IGGKKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFPWEF---YMYRQLDQRISGRERSSFGFAHRIHLYSDYS  121 (351)
Q Consensus        45 i~~~~Y~i~~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~~~e~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  121 (351)
                      +.+++|++.+.||+|+||+||+|+ +..+++.||||++........   ..+...........|++++.+..+....+..
T Consensus        28 ~~~~~y~i~~~lg~G~~g~Vy~a~-~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~  106 (286)
T 3uqc_A           28 IANGRYRLLIFHGGVPPLQFWQAL-DTALDRQVALTFVDPQGVLPDDVLQETLSRTLRLSRIDKPGVARVLDVVHTRAGG  106 (286)
T ss_dssp             ETTTTEEEEEEEEBSTTCEEEEEE-ETTTTEEEEEEESCTTCCSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEE
T ss_pred             EecCcEEEEEEEcccCCeEEEEEE-ecCCCceEEEEEECcccccCHHHHHHHHHHHHHHhcCCCCCcceeeEEEEECCcE
Confidence            556889999999999999999999 577789999999987644321   2222222334566788999999988888999


Q ss_pred             EEEEEecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeeccCCCCCc
Q 018699          122 ILVCDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSGPW  201 (351)
Q Consensus       122 ~lv~e~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~~~~~~  201 (351)
                      |+||||++|++|.+++..     .. ....+..++.|++.||.|||++||+||||||+||+++                 
T Consensus       107 ~lv~e~~~g~~L~~~l~~-----~~-~~~~~~~i~~ql~~aL~~lH~~givH~Dikp~NIll~-----------------  163 (286)
T 3uqc_A          107 LVVAEWIRGGSLQEVADT-----SP-SPVGAIRAMQSLAAAADAAHRAGVALSIDHPSRVRVS-----------------  163 (286)
T ss_dssp             EEEEECCCEEEHHHHHTT-----CC-CHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEEE-----------------
T ss_pred             EEEEEecCCCCHHHHHhc-----CC-ChHHHHHHHHHHHHHHHHHHHCCCccCCCCcccEEEc-----------------
Confidence            999999999999999854     23 4446788999999999999999999999999999999                 


Q ss_pred             ccCCeEEeecCCccccccCCCCccccccccCCCcccceeccCCCCCccchHhHHHHHHHHHHhCccccccccCCCCCce-
Q 018699          202 QDQGLCLVDWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQEKKPWKFQVDTYGLCAIVHMMLHNSYMEIEKKASPDGGL-  280 (351)
Q Consensus       202 ~~~~~~l~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~p~~~~~~~~~~~~-  280 (351)
                      .++.++|+++|                      |++       +++.++|||||||++|+|++|..||........... 
T Consensus       164 ~~g~~kl~~~~----------------------~~~-------~~~~~~Di~slG~il~elltg~~Pf~~~~~~~~~~~~  214 (286)
T 3uqc_A          164 IDGDVVLAYPA----------------------TMP-------DANPQDDIRGIGASLYALLVNRWPLPEAGVRSGLAPA  214 (286)
T ss_dssp             TTSCEEECSCC----------------------CCT-------TCCHHHHHHHHHHHHHHHHHSEECSCCCSBCCCSEEC
T ss_pred             CCCCEEEEecc----------------------ccC-------CCCchhHHHHHHHHHHHHHHCCCCCCcCCcchhhHHH
Confidence            67778887443                      222       258899999999999999999999987654321100 


Q ss_pred             --e----eecCcchhhhhHHHHHHHHHHHHhcCCCCCChHHHHHHHH
Q 018699          281 --V----YLPKLSFKRYWKVELWKSLFTNLLNMSSGNDKEVLQNLQK  321 (351)
Q Consensus       281 --~----~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~~  321 (351)
                        .    ...........+ +.+.+||.+||+.||++| |+.+++..
T Consensus       215 ~~~~~~~~~~~~~~~~~~~-~~l~~li~~~l~~dP~~R-s~~el~~~  259 (286)
T 3uqc_A          215 ERDTAGQPIEPADIDRDIP-FQISAVAARSVQGDGGIR-SASTLLNL  259 (286)
T ss_dssp             CBCTTSCBCCHHHHCTTSC-HHHHHHHHHHHCTTSSCC-CHHHHHHH
T ss_pred             HHHhccCCCChhhcccCCC-HHHHHHHHHHcccCCccC-CHHHHHHH
Confidence              0    011111222234 789999999999999999 88888764

>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A

Probab=100.00  E-value=1.6e-38  Score=288.77  Aligned_cols=257  Identities=15%  Similarity=0.038  Sum_probs=177.3

Q ss_pred             cCeeEEEEEEeeccCceEEEEEEecCCCCceEEEEecCCCCC---------------hHHHHHHHHHhhhc--ccccccc
Q 018699           46 GGKKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFP---------------WEFYMYRQLDQRIS--GRERSSF  108 (351)
Q Consensus        46 ~~~~Y~i~~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~~---------------~e~~~~~~~~~~~~--~~~~~~~  108 (351)
                      ..++|++.+.||+|+||+||+|++   +|+.||||++.....               .|..+++.+.....  ...|+++
T Consensus        18 ~~~~y~~~~~lG~G~~g~V~~~~~---~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~~~~~~~h~ni   94 (336)
T 2vuw_A           18 PTEKLQRCEKIGEGVFGEVFQTIA---DHTPVAIKIIAIEGPDLVNGSHQKTFEEILPEIIISKELSLLSGEVCNRTEGF   94 (336)
T ss_dssp             CHHHHHTCEEEEEETTEEEEEEEE---TTEEEEEEEEEESCSSCBTTBCCBCHHHHHHHHHHHHHHHHGGGCSSSBCCCB
T ss_pred             ccccchheeeecccCceEEEEEEe---CCceEEEEEEecCCccccccccchhHHHHHHHHHHHHHHHHhhccccccCCch
Confidence            357899999999999999999994   579999999875421               23333333332100  0123333


Q ss_pred             c-----------------cceeeecc-------------cCeeEEEEEecCCCCHHHHHHHHHhhCCChhHHHHHHHHHH
Q 018699          109 G-----------------FAHRIHLY-------------SDYSILVCDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIE  158 (351)
Q Consensus       109 ~-----------------~~~~~~~~-------------~~~~~lv~e~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~q  158 (351)
                      +                 .....+..             .+..|+||||+++|++.+.+..     ..+++..++.++.|
T Consensus        95 v~l~~~~~~~~~~hp~iv~~~~~~~~~~~~~~~~~~~~~~~~~~lv~E~~~~g~ll~~~~~-----~~~~~~~~~~i~~q  169 (336)
T 2vuw_A           95 IGLNSVHCVQGSYPPLLLKAWDHYNSTKGSANDRPDFFKDDQLFIVLEFEFGGIDLEQMRT-----KLSSLATAKSILHQ  169 (336)
T ss_dssp             CCEEEEEEEESSCCHHHHHHHHHHHHHTCCSSCCSCCCCTTCEEEEEEEECCCEETGGGTT-----TCCCHHHHHHHHHH
T ss_pred             hhhcceeEecCCCcHHHHHHHHHHhhhccccccCccccccCeEEEEEEecCCCccHHHHHh-----cCCCHHHHHHHHHH
Confidence            3                 33333322             6789999999999876665532     56899999999999


Q ss_pred             HHHHHHHHH-HCCceecCCCCCcEEEeecCCcceeeccC---CCCCcccCCeEEeecCCccccccCCCCccccccccCCC
Q 018699          159 MLCILESLH-DVGIIHGDFKPDNLLIRYARDELTVLDHD---RSGPWQDQGLCLVDWGRGIDLHLFPDNMEFEGDCRTSG  234 (351)
Q Consensus       159 i~~~l~~LH-~~~i~H~dl~p~Nill~~~~~~~~~~~~~---~~~~~~~~~~~l~Dfg~a~~~~~~~~~~~~~~~~g~~~  234 (351)
                      |+.||.||| ++||+||||||+||+++.++.........   .........+||+|||+|.....       ....||+.
T Consensus       170 i~~aL~~lH~~~~ivHrDlKp~NILl~~~~~~~~~~~~~~~~~~~~~~~~~vkL~DFG~a~~~~~-------~~~~gt~~  242 (336)
T 2vuw_A          170 LTASLAVAEASLRFEHRDLHWGNVLLKKTSLKKLHYTLNGKSSTIPSCGLQVSIIDYTLSRLERD-------GIVVFCDV  242 (336)
T ss_dssp             HHHHHHHHHHHHCCBCSCCCGGGEEEEECSCSEEEEEETTEEEEEECTTEEEEECCCTTCBEEET-------TEEECCCC
T ss_pred             HHHHHHHHHHhCCEeECCCCHHHEEEeccCCcceeeeccCccccccCCCceEEEeeccccEecCC-------CcEEEeec
Confidence            999999999 99999999999999999543210000000   00000112799999999975431       23478999


Q ss_pred             cccceeccCCCCCccchHhHHHHH-HHHHHhCccccccccC--------CCCCceeeecCcchhhhhHHHHHHHHHHHHh
Q 018699          235 FRCIEMQEKKPWKFQVDTYGLCAI-VHMMLHNSYMEIEKKA--------SPDGGLVYLPKLSFKRYWKVELWKSLFTNLL  305 (351)
Q Consensus       235 y~aPE~~~~~~~~~~~DiwslG~i-l~~l~~g~~p~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L  305 (351)
                      |+|||++.+.. +.++||||||++ .++++.|..||.....        ..............+..++ +.+++||.+||
T Consensus       243 y~aPE~~~g~~-~~~~Diwsl~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s-~~~~dli~~~L  320 (336)
T 2vuw_A          243 SMDEDLFTGDG-DYQFDIYRLMKKENNNRWGEYHPYSNVLWLHYLTDKMLKQMTFKTKCNTPAMKQIK-RKIQEFHRTML  320 (336)
T ss_dssp             TTCSGGGCCCS-SHHHHHHHHHHHHHTTCTTSCCTHHHHHHHHHHHHHHHHTCCCSSCCCSHHHHHHH-HHHHHHHHHGG
T ss_pred             ccChhhhcCCC-ccceehhhhhCCCCcccccccCCCcchhhhhHHHHhhhhhhccCcccchhhhhhcC-HHHHHHHHHHh
Confidence            99999998776 899999998777 7778899999864210        0001111122233344455 88999999999


Q ss_pred             cCCCCCChHHHHHH-HHHHH
Q 018699          306 NMSSGNDKEVLQNL-QKSFQ  324 (351)
Q Consensus       306 ~~dP~~R~s~~e~l-~~~~~  324 (351)
                      .+|     |+.|+| +|||.
T Consensus       321 ~~d-----sa~e~l~~Hp~f  335 (336)
T 2vuw_A          321 NFS-----SATDLLCQHSLF  335 (336)
T ss_dssp             GSS-----SHHHHHHHCGGG
T ss_pred             ccC-----CHHHHHhcCCCc
Confidence            987     999999 89873

>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*

Probab=99.96  E-value=1.6e-30  Score=250.95  Aligned_cols=189  Identities=13%  Similarity=-0.007  Sum_probs=124.1

Q ss_pred             EEeeccCceEEEEEEecCCCCceEEEEecCCCCC----h--H-HHHHHHHHhh---hcc-ccccccccceeeecccCeeE
Q 018699           54 GCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFP----W--E-FYMYRQLDQR---ISG-RERSSFGFAHRIHLYSDYSI  122 (351)
Q Consensus        54 ~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~~----~--e-~~~~~~~~~~---~~~-~~~~~~~~~~~~~~~~~~~~  122 (351)
                      ...+.|+.|.+..++ +...|+.|++|++.+...    .  + ....+++.++   +.. ..+++++.+...+..++..|
T Consensus       240 ~~~~~~~~~~h~~~r-r~~fg~~~~~K~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~ed~~~~y  318 (569)
T 4azs_A          240 NQPYAGAGLAHKRSR-RYFFGEDYVCKFFYYDMPHGILTAEESQRNKYELHNEIKFLTQPPAGFDAPAVLAHGENAQSGW  318 (569)
T ss_dssp             CC-C--------CCE-EEEECSSEEEEEEESSCSTTCSCHHHHHHHHHHHHHHHHHHHSCCTTCCCCCEEEEEECSSEEE
T ss_pred             hccccCCcccccccc-cccccceeEEEEEecccccccchhhhhHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEECCEEE
Confidence            345677777777776 456789999999875421    1  1 1111222222   222 25778888889999999999


Q ss_pred             EEEEecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeeccCCCCCcc
Q 018699          123 LVCDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSGPWQ  202 (351)
Q Consensus       123 lv~e~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~~~~~~~  202 (351)
                      +||||++|++|.+++..    +.++++.   .|+.||+.||.|+|++||+||||||+|||++                 .
T Consensus       319 LVMEyv~G~~L~d~i~~----~~~l~~~---~I~~QIl~AL~ylH~~GIIHRDIKPeNILL~-----------------~  374 (569)
T 4azs_A          319 LVMEKLPGRLLSDMLAA----GEEIDRE---KILGSLLRSLAALEKQGFWHDDVRPWNVMVD-----------------A  374 (569)
T ss_dssp             EEEECCCSEEHHHHHHT----TCCCCHH---HHHHHHHHHHHHHHHTTCEESCCCGGGEEEC-----------------T
T ss_pred             EEEecCCCCcHHHHHHh----CCCCCHH---HHHHHHHHHHHHHHHCCceeccCchHhEEEC-----------------C
Confidence            99999999999999987    5677654   4789999999999999999999999999999                 7


Q ss_pred             cCCeEEeecCCccccccCCCCccccccccCCCcccceeccCCCCCccchHhHHHHHHHHHHhCccccc
Q 018699          203 DQGLCLVDWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQEKKPWKFQVDTYGLCAIVHMMLHNSYMEI  270 (351)
Q Consensus       203 ~~~~~l~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~p~~  270 (351)
                      ++.+||+|||+|+....  ......+.+||+.|+|||++.+. +..++|+||+|++++.+.++..++.
T Consensus       375 dg~vKL~DFGlAr~~~~--~~~~~~t~vGTp~YmAPE~l~g~-~~~~~d~~s~g~~~~~l~~~~~~~~  439 (569)
T 4azs_A          375 RQHARLIDFGSIVTTPQ--DCSWPTNLVQSFFVFVNELFAEN-KSWNGFWRSAPVHPFNLPQPWSNWL  439 (569)
T ss_dssp             TSCEEECCCTTEESCC-----CCSHHHHHHHHHHHHHHC------------------CCCCTTHHHHH
T ss_pred             CCCEEEeecccCeeCCC--CCccccCceechhhccHHHhCCC-CCCcccccccccchhhhccccchhH
Confidence            88899999999975432  22334567899999999999765 4678999999999998887766654

>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*

Probab=99.90  E-value=8.7e-25  Score=209.81  Aligned_cols=185  Identities=15%  Similarity=0.106  Sum_probs=129.0

Q ss_pred             EEEEEeeccCceEEEEEEecCCCCceEEEEecCCCCCh--HH------HHHHHHHhhhccccccccccceeeecccCeeE
Q 018699           51 QIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFPW--EF------YMYRQLDQRISGRERSSFGFAHRIHLYSDYSI  122 (351)
Q Consensus        51 ~i~~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~~~--e~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  122 (351)
                      ...+.||+|+||+||+|.+   .++.+++|........  ..      +.+......+....|++++.+..+....+..|
T Consensus       339 ~~~~~LG~G~fg~Vy~~~~---~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~~~~  415 (540)
T 3en9_A          339 IPEHLIGKGAEADIKRDSY---LDFDVIIKERVKKGYRDERLDENIRKSRTAREARYLALVKDFGIPAPYIFDVDLDNKR  415 (540)
T ss_dssp             ---------CCEEEEEEEC---SSCEEEEEEECCCTTSCHHHHHHHHHHHHHHHHHHHHHGGGGTCCCCCEEEEETTTTE
T ss_pred             CCCCEEeeCCCEEEEEEEE---CCCeEEEEEEecccccchhhhhHHHHHHHHHHHHHHHhcCCCCcCceEEEEEeCCccE
Confidence            4567999999999999963   3577888875443211  10      11112222333446777775555555667779


Q ss_pred             EEEEecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeeccCCCCCcc
Q 018699          123 LVCDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSGPWQ  202 (351)
Q Consensus       123 lv~e~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~~~~~~~  202 (351)
                      +||||+++++|.+++..            +..++.|++.||.|||++||+||||||+||+++                 .
T Consensus       416 lVmE~~~ggsL~~~l~~------------~~~i~~qi~~aL~~LH~~gIiHrDiKp~NILl~-----------------~  466 (540)
T 3en9_A          416 IMMSYINGKLAKDVIED------------NLDIAYKIGEIVGKLHKNDVIHNDLTTSNFIFD-----------------K  466 (540)
T ss_dssp             EEEECCCSEEHHHHSTT------------CTHHHHHHHHHHHHHHHTTEECTTCCTTSEEES-----------------S
T ss_pred             EEEECCCCCCHHHHHHH------------HHHHHHHHHHHHHHHHHCcCccCCCCHHHEEEC-----------------C
Confidence            99999999999998753            567899999999999999999999999999998                 4


Q ss_pred             cCCeEEeecCCccccccCCCCc-----cccccccCCCcccceeccC--CCCCccchHhHHHHHHHHHHhCcccc
Q 018699          203 DQGLCLVDWGRGIDLHLFPDNM-----EFEGDCRTSGFRCIEMQEK--KPWKFQVDTYGLCAIVHMMLHNSYME  269 (351)
Q Consensus       203 ~~~~~l~Dfg~a~~~~~~~~~~-----~~~~~~g~~~y~aPE~~~~--~~~~~~~DiwslG~il~~l~~g~~p~  269 (351)
                        .+||+|||++..........     ......||+.|+|||++.+  ..|+..+|+|+...-..+-..++.+|
T Consensus       467 --~~kL~DFGla~~~~~~~~~~~~~~~~~~~~~GT~~y~APEv~~~~~~~Y~~~~d~ws~vl~~l~~v~~r~rY  538 (540)
T 3en9_A          467 --DLYIIDFGLGKISNLDEDKAVDLIVFKKAVLSTHHEKFDEIWERFLEGYKSVYDRWEIILELMKDVERRARY  538 (540)
T ss_dssp             --SEEECCCTTCEECCCHHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHCTTHHHHHHHHHHHHTCSCC
T ss_pred             --eEEEEECccCEECCCccccccchhhhhhhhcCCCCcCCHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhcccc
Confidence              69999999997543111000     1235679999999999976  56778899999988877777666554

>1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn complex, rRNA processing, transferase; HET: ADP; 1.75A {Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB: 1tqi_A* 1tqp_A* 1tqm_A* 1zao_A*

Probab=99.86  E-value=2.7e-22  Score=177.05  Aligned_cols=145  Identities=16%  Similarity=0.191  Sum_probs=100.3

Q ss_pred             CeeEEEEEEeeccCceEEEEEEecCCCCceEEEEecCCCCCh-------------------HHHHHHHHHhhhccccccc
Q 018699           47 GKKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFPW-------------------EFYMYRQLDQRISGRERSS  107 (351)
Q Consensus        47 ~~~Y~i~~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~~~-------------------e~~~~~~~~~~~~~~~~~~  107 (351)
                      +..|.+.+.||+|+||.||+|.+  .+|+.||+|++......                   .....+++. ......  +
T Consensus        89 ~~~~~~~~~iG~G~~g~Vy~~~~--~~g~~valK~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~E~~-~l~~l~--~  163 (282)
T 1zar_A           89 GKVDAIGKLMGEGKESAVFNCYS--EKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFR-ALQKLQ--G  163 (282)
T ss_dssp             TSCSEEEEEEEECSSEEEEEEEE--TTTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHH-HHHHTT--T
T ss_pred             CeEEEecCEeccCCCceEEEEEe--CCCCEEEEEEEECCCCchhhhhhhhhhcchhhHHHHHHHHHHHHH-HHHhcc--C
Confidence            34455669999999999999994  77899999998643210                   011111111 111111  2


Q ss_pred             cccceeeecccCeeEEEEEecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecC
Q 018699          108 FGFAHRIHLYSDYSILVCDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYAR  187 (351)
Q Consensus       108 ~~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~  187 (351)
                       +.+..+. ..+..|+||||++|++|.+ +..          .....++.|++.|+.+||++||+||||||+||+++ + 
T Consensus       164 -~~v~~~~-~~~~~~lvmE~~~g~~L~~-l~~----------~~~~~i~~qi~~~l~~lH~~giiHrDlkp~NILl~-~-  228 (282)
T 1zar_A          164 -LAVPKVY-AWEGNAVLMELIDAKELYR-VRV----------ENPDEVLDMILEEVAKFYHRGIVHGDLSQYNVLVS-E-  228 (282)
T ss_dssp             -SSSCCEE-EEETTEEEEECCCCEEGGG-CCC----------SCHHHHHHHHHHHHHHHHHTTEECSCCSTTSEEEE-T-
T ss_pred             -CCcCeEE-eccceEEEEEecCCCcHHH-cch----------hhHHHHHHHHHHHHHHHHHCCCEeCCCCHHHEEEE-C-
Confidence             2222222 2356699999999999988 321          12346899999999999999999999999999998 2 


Q ss_pred             CcceeeccCCCCCcccCCeEEeecCCccccccCCCCccccccccCCCcccceecc
Q 018699          188 DELTVLDHDRSGPWQDQGLCLVDWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQE  242 (351)
Q Consensus       188 ~~~~~~~~~~~~~~~~~~~~l~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~  242 (351)
                                      +.++|+|||++..               +..+.|||.+.
T Consensus       229 ----------------~~vkl~DFG~a~~---------------~~~~~a~e~l~  252 (282)
T 1zar_A          229 ----------------EGIWIIDFPQSVE---------------VGEEGWREILE  252 (282)
T ss_dssp             ----------------TEEEECCCTTCEE---------------TTSTTHHHHHH
T ss_pred             ----------------CcEEEEECCCCeE---------------CCCCCHHHHHH
Confidence                            3489999998853               44568888874

>1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP, manganese, transferase; HET: ADP; 1.89A {Archaeoglobus fulgidus} PDB: 1zp9_A* 1ztf_A*

Probab=99.80  E-value=2.2e-19  Score=156.48  Aligned_cols=140  Identities=14%  Similarity=0.199  Sum_probs=94.9

Q ss_pred             CeeEEEEEEeeccCceEEEEEEecCCCCce--EEEEecCCCCChH-------------------------HHHHHHHHhh
Q 018699           47 GKKYQIKGCAGQGGFAKVFKAYVNGDPEDV--VALKIQKPAFPWE-------------------------FYMYRQLDQR   99 (351)
Q Consensus        47 ~~~Y~i~~~lg~G~~g~V~~a~~~~~~~~~--vaiK~~~~~~~~e-------------------------~~~~~~~~~~   99 (351)
                      +.-|++.+.||+|+||.||+|.+ ..+|+.  ||||++.......                         ....++. ..
T Consensus        46 ~~~~~i~~~ig~G~~g~Vy~a~~-~~~g~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~-~~  123 (258)
T 1zth_A           46 GYITAMGGVISTGKEANVFYADG-VFDGKPVAMAVKIYRIETSEFDKMDEYLYGDERFDMRRISPKEKVFIWTEKEF-RN  123 (258)
T ss_dssp             TSEEEEEEEEEECSSEEEEEEEE-EETTEEEEEEEEEECCC-------GGGTTTCTTSCC----CHHHHHHHHHHHH-HH
T ss_pred             CCchhhCCEEeecceEEEEEEEE-cCCCcEeeEEEEEEECCccchhhHHHhhcccchhhhhccChHHHHHHHHHHHH-HH
Confidence            34589999999999999999994 456788  9999875431110                         0111111 11


Q ss_pred             hccccccccccceeeecccCeeEEEEEecCC-C----CHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHH-HCCcee
Q 018699          100 ISGRERSSFGFAHRIHLYSDYSILVCDYLSQ-G----TLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLH-DVGIIH  173 (351)
Q Consensus       100 ~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~-~----sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH-~~~i~H  173 (351)
                      +....++++..+..+.  .+..++||||+.+ |    +|.+...       ..++..+..++.|++.++.+|| +.||+|
T Consensus       124 l~~l~~~~i~~p~~~~--~~~~~lVmE~~g~~g~~~~~L~~~~~-------~~~~~~~~~i~~qi~~~l~~lH~~~givH  194 (258)
T 1zth_A          124 LERAKEAGVSVPQPYT--YMKNVLLMEFIGEDELPAPTLVELGR-------ELKELDVEGIFNDVVENVKRLYQEAELVH  194 (258)
T ss_dssp             HHHHHHTTCCCCCEEE--EETTEEEEECCEETTEECCBHHHHGG-------GGGGSCHHHHHHHHHHHHHHHHHTSCEEC
T ss_pred             HHHHHhCCCCCCeEEE--cCCCEEEEEecCCCCCccccHHHHhh-------ccChHHHHHHHHHHHHHHHHHHHHCCEEe
Confidence            1111222222222222  2356899999932 3    6766532       2345667889999999999999 999999


Q ss_pred             cCCCCCcEEEeecCCcceeeccCCCCCcccCCeEEeecCCccc
Q 018699          174 GDFKPDNLLIRYARDELTVLDHDRSGPWQDQGLCLVDWGRGID  216 (351)
Q Consensus       174 ~dl~p~Nill~~~~~~~~~~~~~~~~~~~~~~~~l~Dfg~a~~  216 (351)
                      |||||+||+++                 .  .++|+|||+|..
T Consensus       195 rDlkp~NILl~-----------------~--~~~liDFG~a~~  218 (258)
T 1zth_A          195 ADLSEYNIMYI-----------------D--KVYFIDMGQAVT  218 (258)
T ss_dssp             SSCSTTSEEES-----------------S--SEEECCCTTCEE
T ss_pred             CCCCHHHEEEc-----------------C--cEEEEECccccc
Confidence            99999999998                 4  699999999864

>4gyi_A RIO2 kinase; protein kinase, ADP complex, phosphoaspartate, acyl-phosphat ribosome biogenesis, Ser/Thr protein kinase; HET: PHD ADP; 2.20A {Chaetomium thermophilum} PDB: 4gyg_A

Probab=99.68  E-value=6.2e-17  Score=146.98  Aligned_cols=147  Identities=14%  Similarity=0.156  Sum_probs=92.2

Q ss_pred             eEEEEEEeeccCceEEEEEEecCCCCceEEEEecCCCCC------------h---HHH------HHHHHHhhh-cccccc
Q 018699           49 KYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFP------------W---EFY------MYRQLDQRI-SGRERS  106 (351)
Q Consensus        49 ~Y~i~~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~~------------~---e~~------~~~~~~~~~-~~~~~~  106 (351)
                      -|++.++||+|++|.||+|.+  .+|+.||||+++....            .   ...      ........+ ......
T Consensus        96 iY~I~~~IG~Gk~a~VY~a~d--~~G~~vAvKi~r~~~~sfr~v~~~r~~~~~~~~~~~~~~~rl~A~kE~~nL~rL~~~  173 (397)
T 4gyi_A           96 VYSVGSRIGVGKESDIMIVAD--EKGKQKVLKIHRLGRISFRTVKANRDYLRNRSTGSWMYLSRLAAIKEFAFMKALYEE  173 (397)
T ss_dssp             CSEEEEEEEECSSEEEEEEEC--TTCCEEEEEEECTTEECCCCCC--CEECTTSCHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred             EEEecCEeeeCCceEEEEEEC--CCCCEEEEEEEecccccHHHHHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHHhc
Confidence            499999999999999999994  4689999998753210            0   000      000001111 111112


Q ss_pred             ccccceeeecccCeeEEEEEecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeec
Q 018699          107 SFGFAHRIHLYSDYSILVCDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYA  186 (351)
Q Consensus       107 ~~~~~~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~  186 (351)
                      .+..+..+..  ...++||||+.|++|..+..        .  ..+..++.|++.++.+||+.|||||||||.|||++.+
T Consensus       174 gv~vp~p~~~--~~~~LVME~i~G~~L~~l~~--------~--~~~~~l~~qll~~l~~lH~~gIVHrDLKp~NILl~~d  241 (397)
T 4gyi_A          174 GFPVPEPIAQ--SRHTIVMSLVDALPMRQVSS--------V--PDPASLYADLIALILRLAKHGLIHGDFNEFNILIREE  241 (397)
T ss_dssp             TCSCCCEEEE--ETTEEEEECCSCEEGGGCCC--------C--SCHHHHHHHHHHHHHHHHHTTEECSCCSTTSEEEEEE
T ss_pred             CCCCCeeeec--cCceEEEEecCCccHhhhcc--------c--HHHHHHHHHHHHHHHHHHHCCCcCCCCCHHHEEEeCC
Confidence            2222222221  23479999998888754321        1  2235678999999999999999999999999999954


Q ss_pred             CCcceeeccCCCCCcccCCeEEeecCCccc
Q 018699          187 RDELTVLDHDRSGPWQDQGLCLVDWGRGID  216 (351)
Q Consensus       187 ~~~~~~~~~~~~~~~~~~~~~l~Dfg~a~~  216 (351)
                      ...-       .+......+.|+||+.+..
T Consensus       242 gd~~-------d~~~~~~~~~iID~~Q~V~  264 (397)
T 4gyi_A          242 KDAE-------DPSSITLTPIIIXFPQMVS  264 (397)
T ss_dssp             ECSS-------CTTSEEEEEEECCCTTCEE
T ss_pred             CCcc-------cccccccceEEEEeCCccc
Confidence            3210       0000112378999998764

>3tm0_A Aminoglycoside 3'-phosphotransferase; protein kinase, phosphorylation, transferase-antibiotic COMP; HET: ANP B31; 2.10A {Enterococcus faecalis} SCOP: d.144.1.6 PDB: 2b0q_A* 1l8t_A* 3q2j_A* 1j7i_A* 1j7u_A* 3h8p_A* 1j7l_A* 2bkk_A*

Probab=99.20  E-value=1.2e-10  Score=101.14  Aligned_cols=131  Identities=17%  Similarity=0.128  Sum_probs=92.6

Q ss_pred             eEEEEEEeeccCceEEEEEEecCCCCceEEEEecCC---CCC----hHHHHHHHHHhhhccccccccccceeeecccCee
Q 018699           49 KYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKP---AFP----WEFYMYRQLDQRISGRERSSFGFAHRIHLYSDYS  121 (351)
Q Consensus        49 ~Y~i~~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~---~~~----~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  121 (351)
                      .|++...++.|+.+.||++..   .++.+++|+...   ...    .|...++.+..      ...++.+.......+..
T Consensus        15 ~~~~~~~~~g~s~~~v~~~~~---~~~~~vlK~~~~~~~~~~~~~~~E~~~l~~l~~------~~~vP~v~~~~~~~~~~   85 (263)
T 3tm0_A           15 KYRCVKDTEGMSPAKVYKLVG---ENENLYLKMTDSRYKGTTYDVEREKDMMLWLEG------KLPVPKVLHFERHDGWS   85 (263)
T ss_dssp             TSEEEECCSCCSSSEEEEEEC---SSCEEEEEEECGGGTTSTTCHHHHHHHHHHHTT------TSCCCCEEEEEEETTEE
T ss_pred             cceeEeeccCCCCCeEEEEEC---CCCcEEEEeCCcccCCCHHHHHHHHHHHHHHhc------CCCCCeEEEEEecCCce
Confidence            488899999999999999982   257899999764   211    23333333322      12344455555567788


Q ss_pred             EEEEEecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHH---------------------------------
Q 018699          122 ILVCDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHD---------------------------------  168 (351)
Q Consensus       122 ~lv~e~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~---------------------------------  168 (351)
                      |+|||+++|.+|.+.+..         ......++.++..+++.||+                                 
T Consensus        86 ~lv~e~i~G~~l~~~~~~---------~~~~~~~~~~l~~~l~~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  156 (263)
T 3tm0_A           86 NLLMSEADGVLCSEEYED---------EQSPEKIIELYAECIRLFHSIDISDCPYTNSLDSRLAELDYLLNNDLADVDCE  156 (263)
T ss_dssp             EEEEECCSSEEHHHHCCT---------TTCHHHHHHHHHHHHHHHHHSCCTTCSCBCCHHHHHHHHHHHHHTTCSCCSGG
T ss_pred             EEEEEecCCeehhhccCC---------cccHHHHHHHHHHHHHHHhCCCcccCCCcchHHHHHHHHHHHHhccccccccc
Confidence            999999999998775211         11223567899999999998                                 


Q ss_pred             --------------------------CCceecCCCCCcEEEeecCCcceeeccCCCCCcccCCeEEeecCCc
Q 018699          169 --------------------------VGIIHGDFKPDNLLIRYARDELTVLDHDRSGPWQDQGLCLVDWGRG  214 (351)
Q Consensus       169 --------------------------~~i~H~dl~p~Nill~~~~~~~~~~~~~~~~~~~~~~~~l~Dfg~a  214 (351)
                                                ..++|||++|.||+++                 .+..+.|+||+.+
T Consensus       157 ~~~~~~~~~~~~~l~~~l~~~~~~~~~~l~HgDl~~~Nil~~-----------------~~~~~~lIDwe~a  211 (263)
T 3tm0_A          157 NWEEDTPFKDPRELYDFLKTEKPEEELVFSHGDLGDSNIFVK-----------------DGKVSGFIDLGRS  211 (263)
T ss_dssp             GGSTTCSSSSHHHHHHHHHHCCCCCCEEEECSSCCTTSEEEE-----------------TTEEEEECCCTTC
T ss_pred             cccccccCCCHHHHHHHHHhcCCCCCceEECCCCCcCcEEEE-----------------CCcEEEEEEchhc
Confidence                                      4589999999999998                 4344569999966

>1nd4_A Aminoglycoside 3'-phosphotransferase; protein kinase, ATPase, kanamycin; HET: KAN; 2.10A {Klebsiella pneumoniae} SCOP: d.144.1.6

Probab=99.00  E-value=2.7e-09  Score=92.10  Aligned_cols=130  Identities=15%  Similarity=0.070  Sum_probs=82.0

Q ss_pred             EEEEEEeeccCceEEEEEEecCCCCceEEEEecCCCCC----hHHHHHHHHHhhhccccccccccceeeecccCeeEEEE
Q 018699           50 YQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFP----WEFYMYRQLDQRISGRERSSFGFAHRIHLYSDYSILVC  125 (351)
Q Consensus        50 Y~i~~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~~----~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~  125 (351)
                      |.+....+.|..+.||++..  .+|+.+++|+......    .|...++.+...     ...++.+......++..++||
T Consensus        22 ~~~~~~~~gg~~~~v~~~~~--~~g~~~vlK~~~~~~~~~~~~E~~~l~~l~~~-----~~~vP~~~~~~~~~~~~~~v~   94 (264)
T 1nd4_A           22 YDWAQQTIGCSDAAVFRLSA--QGRPVLFVKTDLSGALNELQDEAARLSWLATT-----GVPCAAVLDVVTEAGRDWLLL   94 (264)
T ss_dssp             CEEEECSCTTSSCEEEEEEC--TTSCCEEEEEECSCTTSCHHHHHHHHHHHHTT-----TCCBCCEEEEEECSSCEEEEE
T ss_pred             CceEecccCCCCceEEEEec--CCCCeEEEEeCCcccchhhhHHHHHHHHHHhC-----CCCCCeEEEeccCCCCCEEEE
Confidence            44444445666799999973  4567899999765422    344444444331     111333444445556789999


Q ss_pred             EecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCC-----------------------------------
Q 018699          126 DYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVG-----------------------------------  170 (351)
Q Consensus       126 e~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~-----------------------------------  170 (351)
                      ||++|.+|.  ..      . ...   ..++.+++..++.||+..                                   
T Consensus        95 e~i~G~~l~--~~------~-~~~---~~~~~~l~~~l~~lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  162 (264)
T 1nd4_A           95 GEVPGQDLL--SS------H-LAP---AEKVSIMADAMRRLHTLDPATCPFDHQAKHRIERARTRMEAGLVDQDDLDEEH  162 (264)
T ss_dssp             ECCSSEETT--TS------C-CCH---HHHHHHHHHHHHHHTTSCGGGCCCBCCHHHHHHHHHHHHHTTCCCTTSCCGGG
T ss_pred             EecCCcccC--cC------c-CCH---hHHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHHHHHHHhcCCccchhhhhhc
Confidence            999998874  11      1 111   134556666666666532                                   


Q ss_pred             -----------------------ceecCCCCCcEEEeecCCcceeeccCCCCCcccCCeEEeecCCcc
Q 018699          171 -----------------------IIHGDFKPDNLLIRYARDELTVLDHDRSGPWQDQGLCLVDWGRGI  215 (351)
Q Consensus       171 -----------------------i~H~dl~p~Nill~~~~~~~~~~~~~~~~~~~~~~~~l~Dfg~a~  215 (351)
                                             ++|+|++|.||+++                 .++.+.|+||+.+.
T Consensus       163 ~~~~~~~~~~~l~~~~~~~~~~~l~HgDl~~~Nil~~-----------------~~~~~~liD~~~a~  213 (264)
T 1nd4_A          163 QGLAPAELFARLKARMPDGEDLVVTHGDACLPNIMVE-----------------NGRFSGFIDCGRLG  213 (264)
T ss_dssp             TTCCHHHHHHHHHHTCCSSCCEEEECSSCCGGGEEEE-----------------TTEEEEECCCTTCE
T ss_pred             cCccHHHHHHHHHHhcCCCCCeEEECCCCCCCcEEEE-----------------CCcEEEEEcchhcc
Confidence                                   99999999999998                 44446699999763

>3sg8_A APH(2'')-ID; antibiotic resistance enzyme, transferase, aminoglycoside, phosphorylation, transferase-antibiotic complex; HET: TOY; 1.80A {Enterococcus casseliflavus} PDB: 3sg9_A* 3n4v_A 3n4t_A 3n4u_A 3r81_A* 3r80_A* 3r7z_A* 3r82_A* 3vcq_A* 4dbx_A 4de4_A* 4dfb_A* 4dfu_A* 4dt9_A* 4dt8_A* 4dtb_A* 3sgc_A 4dta_A* 3lzh_A

Probab=98.86  E-value=2.8e-09  Score=94.62  Aligned_cols=189  Identities=13%  Similarity=0.110  Sum_probs=104.0

Q ss_pred             EEeeccCceEEEEEEecCCCCceEEEEecCCCCC-hHHHHHHHHHhhhccccccccccceeeeccc---CeeEEEEEecC
Q 018699           54 GCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFP-WEFYMYRQLDQRISGRERSSFGFAHRIHLYS---DYSILVCDYLS  129 (351)
Q Consensus        54 ~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~~-~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~lv~e~~~  129 (351)
                      +.++.|..+.||++.      +.+++|+...... .....+..+...+........+.+.......   ...|+||++++
T Consensus        26 ~~~~~G~~n~v~~v~------~~~vlR~~~~~~~~~~~~~E~~~l~~l~~~~~v~vP~~~~~~~~~~~~~~~~~vm~~i~   99 (304)
T 3sg8_A           26 EISGEGNDCIAYEIN------RDFIFKFPKHSRGSTNLFNEVNILKRIHNKLPLPIPEVVFTGMPSETYQMSFAGFTKIK   99 (304)
T ss_dssp             CEEEECSSEEEEEST------TSEEEEEESSHHHHHHHHHHHHHHHHHTTSSSSCCCCEEEECCCCSSCSCSCEEEECCC
T ss_pred             EecCCCCcceEEEEC------CEEEEEecCCcchHHHHHHHHHHHHHHHhcCCCCCCceEeecCCCCCCCcceEEEcccC
Confidence            347889999999874      3488998653310 0111111111111111111122222222122   23488999999


Q ss_pred             CCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHH-----------------------------------------
Q 018699          130 QGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHD-----------------------------------------  168 (351)
Q Consensus       130 ~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~-----------------------------------------  168 (351)
                      |.+|.+....      .++......++.+++..++.||+                                         
T Consensus       100 G~~l~~~~~~------~l~~~~~~~~~~~l~~~la~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  173 (304)
T 3sg8_A          100 GVPLTPLLLN------NLPKQSQNQAAKDLARFLSELHSINISGFKSNLVLDFREKINEDNKKIKKLLSRELKGPQMKKV  173 (304)
T ss_dssp             CEECCHHHHH------TSCHHHHHHHHHHHHHHHHHHHHSCCTTSCGGGBCCHHHHHHHHHHHHHHHHTTTSCHHHHHHH
T ss_pred             CeECCccccc------cCCHHHHHHHHHHHHHHHHHHHcCCCCCCCccchhhHHHHHHHHHHHHHHHhcccCCcccHHHH
Confidence            9887653322      35566666777777777777775                                         


Q ss_pred             -----------------CCceecCCCCCcEEEeecCCcceeeccCCCCCcccCCeEEeecCCccccccCCCCcccccccc
Q 018699          169 -----------------VGIIHGDFKPDNLLIRYARDELTVLDHDRSGPWQDQGLCLVDWGRGIDLHLFPDNMEFEGDCR  231 (351)
Q Consensus       169 -----------------~~i~H~dl~p~Nill~~~~~~~~~~~~~~~~~~~~~~~~l~Dfg~a~~~~~~~~~~~~~~~~g  231 (351)
                                       ..++|+|++|.||+++.++               ...+.|+||+.+.....   .........
T Consensus       174 ~~~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~---------------~~~~~~iD~~~~~~~~~---~~Dl~~~~~  235 (304)
T 3sg8_A          174 DDFYRDILENEIYFKYYPCLIHNDFSSDHILFDTEK---------------NTICGIIDFGDAAISDP---DNDFISLME  235 (304)
T ss_dssp             HHHHHHHHTCGGGTCCCCEEECSCCCGGGEEEETTT---------------TEEEEECCCTTCEEECT---THHHHTTCC
T ss_pred             HHHHHHHHhccccccCCceeEeCCCCcccEEEeCCC---------------CCEEEEEeCCCCccCCh---HHHHHHHHh
Confidence                             1379999999999999321               34477999997753211   000000000


Q ss_pred             CCCcccceecc------CC-C-------CCccchHhHHHHHHHHHHhCccccccc
Q 018699          232 TSGFRCIEMQE------KK-P-------WKFQVDTYGLCAIVHMMLHNSYMEIEK  272 (351)
Q Consensus       232 ~~~y~aPE~~~------~~-~-------~~~~~DiwslG~il~~l~~g~~p~~~~  272 (351)
                      ...-..|+...      +. .       .....+.|++|.++|.+.+|..+|...
T Consensus       236 ~~~~~~~~~~~~~l~~Y~~~~~~~~~~r~~~~~~~~~l~~~~~~~~~g~~~~~~~  290 (304)
T 3sg8_A          236 DDEEYGMEFVSKILNHYKHKDIPTVLEKYRMKEKYWSFEKIIYGKEYGYMDWYEE  290 (304)
T ss_dssp             TTTSCCHHHHHHHHHHHTCSCHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHH
T ss_pred             hccccCHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHH
Confidence            00001222110      00 0       023368999999999999999888643

>3dxp_A Putative acyl-COA dehydrogenase; protein kinase-like fold, structural genomics, joint center structural genomics, JCSG; 2.32A {Ralstonia eutropha JMP134}

Probab=98.83  E-value=1.6e-08  Score=91.87  Aligned_cols=135  Identities=16%  Similarity=0.206  Sum_probs=87.1

Q ss_pred             EEEEeeccCceEEEEEEecCCCCceEEEEecC--CCC--------ChHHHHHHHHHhhhccccccccccceeeeccc---
Q 018699           52 IKGCAGQGGFAKVFKAYVNGDPEDVVALKIQK--PAF--------PWEFYMYRQLDQRISGRERSSFGFAHRIHLYS---  118 (351)
Q Consensus        52 i~~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~--~~~--------~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---  118 (351)
                      -.+.|+.|.++.||++.. .  +..+++|+..  ...        ..|...++.+..    . ...++.+.......   
T Consensus        42 ~~~~l~~G~sn~~y~v~~-~--~~~~vlr~~~~p~~~~~~~~~~~~~E~~~l~~L~~----~-~vpvP~~~~~~~~~~~~  113 (359)
T 3dxp_A           42 SVEQFKGGQSNPTFKLVT-P--GQTYVMRAKPGPKSKLLPSAHAIEREYRVMDALAG----T-DVPVAKMYALCEDESVI  113 (359)
T ss_dssp             EEEECCC-CCSCEEEEEC-S--SCEEEEECCCC----------CHHHHHHHHHHHTT----S-SSCCCCEEEEECCTTTT
T ss_pred             eEEEcCCcccceEEEEEE-C--CceEEEEeCCCCCCCCCCcHHHHHHHHHHHHHhhc----C-CCCCCcEEEECCCCCcc
Confidence            367789999999999983 2  3578888876  321        112333322222    1 11233333333333   


Q ss_pred             CeeEEEEEecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHH------------------------------
Q 018699          119 DYSILVCDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHD------------------------------  168 (351)
Q Consensus       119 ~~~~lv~e~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~------------------------------  168 (351)
                      +..|+||||++|..+.+..      -..++......++.+++.+|+.||+                              
T Consensus       114 g~~~~vme~v~G~~l~~~~------~~~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  187 (359)
T 3dxp_A          114 GRAFYIMEFVSGRVLWDQS------LPGMSPAERTAIYDEMNRVIAAMHTVDYQAIGLGDYGKPGNYFQRQIERWTKQYK  187 (359)
T ss_dssp             SSCEEEEECCCCBCCCCTT------CTTCCHHHHHHHHHHHHHHHHHHHHSCTTTTTCTTSSCCSCHHHHHHHHHHHHHH
T ss_pred             CCeEEEEEecCCeecCCCc------cccCCHHHHHHHHHHHHHHHHHHhCCCchhccccccCCCCCchHHHHHHHHHHHH
Confidence            4579999999987774311      1345677778889999999999997                              


Q ss_pred             ----------------------------CCceecCCCCCcEEEeecCCcceeeccCCCCCcccCCeEEeecCCcc
Q 018699          169 ----------------------------VGIIHGDFKPDNLLIRYARDELTVLDHDRSGPWQDQGLCLVDWGRGI  215 (351)
Q Consensus       169 ----------------------------~~i~H~dl~p~Nill~~~~~~~~~~~~~~~~~~~~~~~~l~Dfg~a~  215 (351)
                                                  .+++|||++|.||+++.++.               ..+.|+||+.+.
T Consensus       188 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~lvHgD~~~~Nil~~~~~~---------------~v~~viDwe~a~  247 (359)
T 3dxp_A          188 LSETESIPAMDSLMDWLPQHIPQEDADLTSIVHGDYRLDNLMFHPTEP---------------RVLAVLDWELST  247 (359)
T ss_dssp             HHCCSCCHHHHHHHHHGGGCCCSTTSSCCEEECSSCSGGGEEECSSSS---------------CEEEECCCTTCE
T ss_pred             hcCCcCChHHHHHHHHHHhcCCCccCCCceEEeCCCCCCcEEEeCCCC---------------cEEEEECccccc
Confidence                                        36899999999999983211               125899999774

>4gkh_A Aminoglycoside 3'-phosphotransferase APHA1-IAB; pyrazolopyrimidine, 1-Na-PP1, bumped kinase inhibitor, BKI, kinase inhibitor; HET: KAN 0J9; 1.86A {Acinetobacter baumannii} PDB: 4feu_A* 4few_A* 4fex_A* 4fev_A* 4gki_A* 4ej7_A* 3r78_A*

Probab=98.29  E-value=6.6e-06  Score=71.23  Aligned_cols=96  Identities=16%  Similarity=0.109  Sum_probs=55.4

Q ss_pred             ccCc-eEEEEEEecCCCCceEEEEecCCCCCh----HHHHHHHHHhhhccccccccccceeeecccCeeEEEEEecCCCC
Q 018699           58 QGGF-AKVFKAYVNGDPEDVVALKIQKPAFPW----EFYMYRQLDQRISGRERSSFGFAHRIHLYSDYSILVCDYLSQGT  132 (351)
Q Consensus        58 ~G~~-g~V~~a~~~~~~~~~vaiK~~~~~~~~----e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~s  132 (351)
                      .|.. +.||+.. ....+..+++|+-......    |...++.+..    .  .-++.+..+...++..|+|||+++|.+
T Consensus        34 ~G~S~~~v~rl~-~~~~~~~~~lk~~~~~~~~~~~~E~~~l~~l~~----~--vPVP~v~~~~~~~~~~~lvme~l~G~~  106 (272)
T 4gkh_A           34 VGQSGATIYRLY-GKPNAPELFLKHGKGSVANDVTDEMVRLNWLTA----F--MPLPTIKHFIRTPDDAWLLTTAIPGKT  106 (272)
T ss_dssp             CSSSSCEEEEEE-CCTTCCCEEEEEEETHHHHHHHHHHHHHHHHTT----T--SCCCCEEEEEEETTEEEEEEECCCSEE
T ss_pred             CCCcCCeEEEEE-ecCCCeEEEEEECCCCCHhHHHHHHHHHHHhcc----C--CCcCeEEEEEEECCeEEEEEEeeCCcc
Confidence            3444 3689887 4556678899986543222    2222222221    1  113444445556778899999999988


Q ss_pred             HHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHH
Q 018699          133 LQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHD  168 (351)
Q Consensus       133 L~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~  168 (351)
                      +.+.....        ......+..++...++.||+
T Consensus       107 ~~~~~~~~--------~~~~~~~~~~l~~~L~~Lh~  134 (272)
T 4gkh_A          107 AFQVLEEY--------PDSGENIVDALAVFLRRLHS  134 (272)
T ss_dssp             HHHHHHHC--------GGGHHHHHHHHHHHHHHHHT
T ss_pred             ccccccCC--------HHHHHHHHHHHHHHHHHhcC
Confidence            87765431        11122345666666666664

>3tdw_A Gentamicin resistance protein; kinase, phosphoryl transfer, antibiotic resistance, transfer; HET: GDP; 1.70A {Enterococcus gallinarum} PDB: 3tdv_A*

Probab=98.22  E-value=1.2e-05  Score=71.15  Aligned_cols=72  Identities=10%  Similarity=-0.038  Sum_probs=39.4

Q ss_pred             EEeeccCceEEEEEEecCCCCceEEEEecCCCC-----ChHHHHHHHHHhhhccccccccccceeee-cccCeeEEEEEe
Q 018699           54 GCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAF-----PWEFYMYRQLDQRISGRERSSFGFAHRIH-LYSDYSILVCDY  127 (351)
Q Consensus        54 ~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~-----~~e~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~lv~e~  127 (351)
                      +.++.|....||+.      ++.+++|+-....     ..|...++.+...    ....++.+.... ...+..|+|||+
T Consensus        25 ~~l~~G~~n~v~~v------g~~~VlR~~~~~~~~~~~~~E~~~L~~L~~~----~~v~VP~~~~~~~~~~g~~~~v~e~   94 (306)
T 3tdw_A           25 ESLGEGFRNYAILV------NGDWVFRFPKSQQGADELNKEIQLLPLLVGC----VKVNIPQYVYIGKRSDGNPFVGYRK   94 (306)
T ss_dssp             EEEEECSSEEEEEE------TTTEEEEEESSHHHHHHHHHHHHHHHHHTTT----CSSBCCCEEEEEECTTSCEEEEEEC
T ss_pred             eecCCCcceeEEEE------CCEEEEEecCCchHHHHHHHHHHHHHHHHhc----CCCCCCCeEeecccCCCceEEEEec
Confidence            45677888899987      3557888853221     1222233222221    111122222222 234567899999


Q ss_pred             cCCCCHHH
Q 018699          128 LSQGTLQD  135 (351)
Q Consensus       128 ~~~~sL~~  135 (351)
                      ++|.++.+
T Consensus        95 i~G~~l~~  102 (306)
T 3tdw_A           95 VQGQILGE  102 (306)
T ss_dssp             CCSEECHH
T ss_pred             cCCeECch
Confidence            99987765

>2yle_A Protein spire homolog 1; actin-binding protein, actin polymerization; 1.80A {Homo sapiens} PDB: 2ylf_A 3r7g_A 3rbw_A

Probab=97.95  E-value=0.00013  Score=60.07  Aligned_cols=137  Identities=10%  Similarity=0.013  Sum_probs=90.4

Q ss_pred             CCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHC-CceecCCCCCcEEEeecCCcceeeccCCCCCcccCCeEE
Q 018699          130 QGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDV-GIIHGDFKPDNLLIRYARDELTVLDHDRSGPWQDQGLCL  208 (351)
Q Consensus       130 ~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~-~i~H~dl~p~Nill~~~~~~~~~~~~~~~~~~~~~~~~l  208 (351)
                      ..+|.+.++.+   +.+++++++|.++.|.+.++..+-.. .-...=+.|..|++.                 .+|++.+
T Consensus        32 ~vSL~eIL~~~---~~PlsEEqaWALc~Qc~~~L~~~~~~~~~~~~i~~~~~i~l~-----------------~dG~V~f   91 (229)
T 2yle_A           32 ALSLEEILRLY---NQPINEEQAWAVCYQCCGSLRAAARRRQPRHRVRSAAQIRVW-----------------RDGAVTL   91 (229)
T ss_dssp             EEEHHHHHHHH---TSCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCSGGGEEEE-----------------TTSCEEE
T ss_pred             cccHHHHHHHc---CCCcCHHHHHHHHHHHHHHHHhhhhcccCCceecCCcceEEe-----------------cCCceec
Confidence            34899999988   79999999999999999998877321 111223457888888                 6777766


Q ss_pred             eecCCccccccCCCCccccccccCCCcccceeccCCCCCccchHhHHHHHHHHHHhCccccccccCCCCCceeeecCcch
Q 018699          209 VDWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQEKKPWKFQVDTYGLCAIVHMMLHNSYMEIEKKASPDGGLVYLPKLSF  288 (351)
Q Consensus       209 ~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~  288 (351)
                      .+ +.+.              .....+.|||... ...+.+.=|||||+++|.-+--..|...+...             
T Consensus        92 ~~-~~s~--------------~~~~~~~~pe~~~-~~~te~~~IysLG~tLY~ALDygL~e~eE~eL-------------  142 (229)
T 2yle_A           92 AP-AADD--------------AGEPPPVAGKLGY-SQCMETEVIESLGIIIYKALDYGLKENEEREL-------------  142 (229)
T ss_dssp             CC-C--------------------------CCSS-SSSCHHHHHHHHHHHHHHHHTTTCCTTEEECC-------------
T ss_pred             cc-cccc--------------ccccCCCChhhcc-ccchHHHHHHHHHHHHHHHhhcCCCcccchhh-------------
Confidence            53 1110              1133566887763 23357889999999999988655444432222             


Q ss_pred             hhhhHHHHHHHHHHHHhcCC-------------------------CCCChHHHHHHH
Q 018699          289 KRYWKVELWKSLFTNLLNMS-------------------------SGNDKEVLQNLQ  320 (351)
Q Consensus       289 ~~~~~~~~~~~li~~~L~~d-------------------------P~~R~s~~e~l~  320 (351)
                      +     +.+..||..|.+-.                         +..|++..++|+
T Consensus       143 S-----~~LE~LL~~Mt~~~~d~~~~DeG~~~~~eg~~d~~~~~~~~~~~sl~~Vi~  194 (229)
T 2yle_A          143 S-----PPLEQLIDHMANTVEADGSNDEGYEAAEEGLGDEDEKRKISAIRSYRDVMK  194 (229)
T ss_dssp             C-----HHHHHHHHHHTTCCC--------------------CCSCCCCCCSHHHHHH
T ss_pred             C-----HHHHHHHHHHHhcccccccccccccccccccccccccccccCcCCHHHHHH
Confidence            2     78899999998662                         457888888885

>2q83_A YTAA protein; 2635576, structural genomics, joint center for structu genomics, JCSG, protein structure initiative, PSI-2, transf; HET: ADN CIT UNL; 2.50A {Bacillus subtilis}

Probab=97.85  E-value=0.00013  Score=65.24  Aligned_cols=30  Identities=17%  Similarity=0.364  Sum_probs=25.7

Q ss_pred             CCceecCCCCCcEEEeecCCcceeeccCCCCCcccCCeEEeecCCcc
Q 018699          169 VGIIHGDFKPDNLLIRYARDELTVLDHDRSGPWQDQGLCLVDWGRGI  215 (351)
Q Consensus       169 ~~i~H~dl~p~Nill~~~~~~~~~~~~~~~~~~~~~~~~l~Dfg~a~  215 (351)
                      .+++|||+.+.||+++                 .++.+.|+||+.+.
T Consensus       222 ~~l~HgD~~~~Nil~~-----------------~~~~~~lIDfe~a~  251 (346)
T 2q83_A          222 PNLCHQDYGTGNTLLG-----------------ENEQIWVIDLDTVS  251 (346)
T ss_dssp             CCEECSSCSTTSEEEC-----------------GGGCEEECCCTTCE
T ss_pred             CceecCCCCcccEEEe-----------------CCCcEEEEehhhcc
Confidence            5799999999999998                 55668999999663

>2olc_A MTR kinase, methylthioribose kinase; kinase ADP-2HO complex, transferase; HET: CPS ADP; 2.00A {Bacillus subtilis} SCOP: d.144.1.6 PDB: 2pu8_A* 2pui_A* 2pul_A* 2pun_A* 2pup_A*

Probab=97.85  E-value=0.00014  Score=66.60  Aligned_cols=30  Identities=20%  Similarity=0.312  Sum_probs=21.8

Q ss_pred             EEEeeccCceEEEEEEecCCCCceEEEEecC
Q 018699           53 KGCAGQGGFAKVFKAYVNGDPEDVVALKIQK   83 (351)
Q Consensus        53 ~~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~   83 (351)
                      .+.||.|..+.||++.. ..+++.+++|...
T Consensus        35 ~~~lg~G~~n~vyrv~~-~~~~~~~vvK~~~   64 (397)
T 2olc_A           35 CQEIGDGNLNYVFHIYD-QEHDRALIIKQAV   64 (397)
T ss_dssp             EEECCSSSSEEEEEEEC-----CEEEEEEEC
T ss_pred             EEECCCCceEEEEEEEE-CCCCcEEEEEecc
Confidence            56899999999999973 3456789999754

>3ats_A Putative uncharacterized protein; hypothetical protein, putative aminoglycoside phosphortransf transferase; 1.67A {Mycobacterium tuberculosis} PDB: 3att_A*

Probab=97.77  E-value=6.3e-05  Score=67.81  Aligned_cols=79  Identities=10%  Similarity=0.101  Sum_probs=43.4

Q ss_pred             EEEEEe-eccCceEEEEEEec--CC---CCceEEEEecCCCC----------ChHHHHHHHHHhhhccccccccccceee
Q 018699           51 QIKGCA-GQGGFAKVFKAYVN--GD---PEDVVALKIQKPAF----------PWEFYMYRQLDQRISGRERSSFGFAHRI  114 (351)
Q Consensus        51 ~i~~~l-g~G~~g~V~~a~~~--~~---~~~~vaiK~~~~~~----------~~e~~~~~~~~~~~~~~~~~~~~~~~~~  114 (351)
                      ...+.| +.|..+.+|+....  ..   +++.+++|+.....          ..|...++.+....    ....+.+...
T Consensus        23 ~~~~~l~~~G~~n~~y~v~~~~~~~~~~~~~~~vlR~~~~~~~~~~~~~~~~~~E~~~l~~L~~~~----~vpvP~v~~~   98 (357)
T 3ats_A           23 TVESGVDSTGMSSETIILTARWQQDGRSIQQKLVARVAPAAEDVPVFPTYRLDHQFEVIRLVGELT----DVPVPRVRWI   98 (357)
T ss_dssp             EEEEEECTTSSEEEEEEEEEEEEETTEEEEEEEEEEECCCGGGCCSSSCCCHHHHHHHHHHHHHHC----CSCCCCEEEE
T ss_pred             EEEEECCCCCccceEEEEEEecccCCCCCCceEEEEeCCCCCccccCchhHHHHHHHHHHHHhhcC----CCCCCcEEEE
Confidence            345677 78888999988732  01   15678899865422          12344444444320    0112222322


Q ss_pred             eccc---CeeEEEEEecCCCCH
Q 018699          115 HLYS---DYSILVCDYLSQGTL  133 (351)
Q Consensus       115 ~~~~---~~~~lv~e~~~~~sL  133 (351)
                      ....   +..|+|||+++|.++
T Consensus        99 ~~~~~~~g~~~~v~e~l~G~~l  120 (357)
T 3ats_A           99 ETTGDVLGTPFFLMDYVEGVVP  120 (357)
T ss_dssp             ECSSTTTSSCEEEEECCCCBCC
T ss_pred             ccCCCccCCceEEEEecCCCCh
Confidence            2222   356899999987654

>2pyw_A Uncharacterized protein; 5-methylthioribose kinase, plant methionine recycling, refol transferase; HET: SR1 ADP; 1.90A {Arabidopsis thaliana}

Probab=97.63  E-value=0.00049  Score=63.50  Aligned_cols=81  Identities=10%  Similarity=0.141  Sum_probs=46.4

Q ss_pred             HHCCceecCCCCCcEEEeecCCcceeeccCCCCCcccCCeEEeecCCccccccCCCCcccccccc--CCCcccceeccCC
Q 018699          167 HDVGIIHGDFKPDNLLIRYARDELTVLDHDRSGPWQDQGLCLVDWGRGIDLHLFPDNMEFEGDCR--TSGFRCIEMQEKK  244 (351)
Q Consensus       167 H~~~i~H~dl~p~Nill~~~~~~~~~~~~~~~~~~~~~~~~l~Dfg~a~~~~~~~~~~~~~~~~g--~~~y~aPE~~~~~  244 (351)
                      +...++|||+.|.||+++                 .++ +.|+||+.+......   ........  ...|.+|+.....
T Consensus       230 ~~~~liHGDl~~~Nil~~-----------------~~~-~~lID~e~a~~G~p~---~Dla~~l~~~~~~~~~~~~~~~~  288 (420)
T 2pyw_A          230 RAQALIHGDLHTGSVMVT-----------------QDS-TQVIDPEFSFYGPMG---FDIGAYLGNLILAFFAQDGHATQ  288 (420)
T ss_dssp             BCCEEECSCCSGGGEEEC-----------------SSC-EEECCCTTCEEECHH---HHHHHHHHHHHHHHHHGGGGCCS
T ss_pred             CCCeEEecCCCCCcEEEe-----------------CCC-CEEEeCcccccCchH---HHHHHHHHHHHHHHHhccccccc
Confidence            356899999999999998                 333 899999977531100   00000000  1234555444211


Q ss_pred             ---CCCccchHhHHHHHHHHHHhCccc
Q 018699          245 ---PWKFQVDTYGLCAIVHMMLHNSYM  268 (351)
Q Consensus       245 ---~~~~~~DiwslG~il~~l~~g~~p  268 (351)
                         ......++.+++..++..+.+...
T Consensus       289 ~~~~~~~~~~~~~~~~~~~~~y~~~~~  315 (420)
T 2pyw_A          289 ENDRKEYKQWILRTIEQTWNLFNKRFI  315 (420)
T ss_dssp             SCCSHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             ccchHHHHHHHHHHHHHHHHHHHHHHH
Confidence               112334556777788888776543

>3jr1_A Putative fructosamine-3-kinase; YP_719053.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 2.32A {Haemophilus somnus 129PT}

Probab=97.27  E-value=0.0021  Score=56.63  Aligned_cols=74  Identities=15%  Similarity=0.087  Sum_probs=45.4

Q ss_pred             EEEeeccCceEEEEEEecCCCCceEEEEecCCCC----ChHHHHHHHHHhhhccccccccccceeeecccCeeEEEEEec
Q 018699           53 KGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAF----PWEFYMYRQLDQRISGRERSSFGFAHRIHLYSDYSILVCDYL  128 (351)
Q Consensus        53 ~~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~----~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~  128 (351)
                      .+.|+.|....+|+...   +++.+++|+.....    ..|...++.+...    ....++.+.......+..|+|||++
T Consensus        41 ~~~l~gG~~n~~y~v~~---~~~~~vlK~~~~~~~~~~~~E~~~L~~L~~~----~~v~VP~vl~~~~~~g~~~lvme~l  113 (312)
T 3jr1_A           41 KEKLYSGEMNEIWLIND---EVQTVFVKINERSYRSMFRAEADQLALLAKT----NSINVPLVYGIGNSQGHSFLLLEAL  113 (312)
T ss_dssp             EEEECCSSSSEEEEEES---SSCEEEEEEEEGGGHHHHHHHHHHHHHHHHT----TSSBCCCEEEEEECSSEEEEEEECC
T ss_pred             eEEeCCccceeeeEEEE---CCCeEEEEeCCcccHHHHHHHHHHHHHHHhh----CCCCcceEEEEeecCCceEEEEEec
Confidence            56788999999999983   35678889865432    1233333333321    1122334444444457889999999


Q ss_pred             CCCCH
Q 018699          129 SQGTL  133 (351)
Q Consensus       129 ~~~sL  133 (351)
                      +|..+
T Consensus       114 ~G~~~  118 (312)
T 3jr1_A          114 NKSKN  118 (312)
T ss_dssp             CCCCC
T ss_pred             cCCCC
Confidence            88653

>3dxq_A Choline/ethanolamine kinase family protein; NP_106042.1, STR genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 2.55A {Mesorhizobium loti}

Probab=97.19  E-value=0.0017  Score=56.97  Aligned_cols=66  Identities=18%  Similarity=0.179  Sum_probs=36.9

Q ss_pred             EEEeeccCceEEEEEEecCCCCceEEEEecCCCC------ChHHHHHHHHHhhhccccccccccceeeecccCeeEEEEE
Q 018699           53 KGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAF------PWEFYMYRQLDQRISGRERSSFGFAHRIHLYSDYSILVCD  126 (351)
Q Consensus        53 ~~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~------~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e  126 (351)
                      .+.|+.|....+|++       +.+++|+.....      ..|...++.+...       .+. +..+....+.-++|+|
T Consensus        23 i~~l~gG~tN~~~~~-------~~~vlR~~~~~~~~~~~r~~E~~~l~~l~~~-------g~~-P~~~~~~~~~~~~v~e   87 (301)
T 3dxq_A           23 PLERLGGLTNLVFRA-------GDLCLRIPGKGTEEYINRANEAVAAREAAKA-------GVS-PEVLHVDPATGVMVTR   87 (301)
T ss_dssp             CEEEESCSSEEEEEE-------TTEEEEEECC----CCCHHHHHHHHHHHHHT-------TSS-CCEEEECTTTCCEEEE
T ss_pred             eeEcCCcccccccee-------eeEEEECCCCCccceeCHHHHHHHHHHHHHc-------CCC-CceEEEECCCCEEEEe
Confidence            577888889999988       347888876431      1233334333332       111 2222223333468999


Q ss_pred             ec-CCCCH
Q 018699          127 YL-SQGTL  133 (351)
Q Consensus       127 ~~-~~~sL  133 (351)
                      |+ +|.++
T Consensus        88 ~i~~g~~l   95 (301)
T 3dxq_A           88 YIAGAQTM   95 (301)
T ss_dssp             CCTTCEEC
T ss_pred             ecCCCccC
Confidence            99 66544

>3csv_A Aminoglycoside phosphotransferase; YP_614837.1, phosphotransferase enzyme family, structural genomics, JOIN for structural genomics, JCSG; HET: MSE; 2.15A {Silicibacter SP}

Probab=97.10  E-value=0.005  Score=54.65  Aligned_cols=35  Identities=23%  Similarity=0.315  Sum_probs=25.9

Q ss_pred             CCceecCCCCCcEEEeecCCcceeeccCCCCCcccCCeEEeecCCccc
Q 018699          169 VGIIHGDFKPDNLLIRYARDELTVLDHDRSGPWQDQGLCLVDWGRGID  216 (351)
Q Consensus       169 ~~i~H~dl~p~Nill~~~~~~~~~~~~~~~~~~~~~~~~l~Dfg~a~~  216 (351)
                      ..++|||+.+.||+++.+..             ..+.+.|+||+.+..
T Consensus       183 ~~lvHgD~~~~Nil~~~~~~-------------~~~~~~lIDf~~a~~  217 (333)
T 3csv_A          183 MVFVHRDFHAQNLLWLPERE-------------GLARVGVIDFQDAKL  217 (333)
T ss_dssp             CEEECSCCSGGGEEECTTSC-------------GGGGEEECCCTTCEE
T ss_pred             CeeEeCCcCcccEEeccCcC-------------CCCCeEEEeCCCcCc
Confidence            47999999999999983211             124578999997753

>3f7w_A Putative fructosamine-3-kinase; YP_290396.1, structural GENO joint center for structural genomics, JCSG, protein structu initiative, PSI-2; 1.85A {Thermobifida fusca YX}

Probab=97.07  E-value=0.0091  Score=51.81  Aligned_cols=76  Identities=11%  Similarity=0.089  Sum_probs=46.2

Q ss_pred             CeeEEEEEEeeccCceEEEEEEecCCCCceEEEEecCCCCC-------hHHHHHHHHHhhhccccccccccceeeecccC
Q 018699           47 GKKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFP-------WEFYMYRQLDQRISGRERSSFGFAHRIHLYSD  119 (351)
Q Consensus        47 ~~~Y~i~~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~~-------~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  119 (351)
                      |....-++.+|.|..+.||+...  .+|+.|++|+......       .|...++.+....      .++.+..+..  +
T Consensus        14 G~~v~~v~~~g~G~~~~vyrv~l--~DG~~~~vK~~~~~~~~~~~~~~~Ea~~L~~L~~~~------~vpvP~v~~~--~   83 (288)
T 3f7w_A           14 GREVAAVAERGHSHRWHLYRVEL--ADGTPLFVKALPDDAPALDGLFRAEALGLDWLGRSF------GSPVPQVAGW--D   83 (288)
T ss_dssp             CCCEEEEEEEEEETTEEEEEEEE--TTSCEEEEEECCTTCCCCTTHHHHHHHHHHHHTCST------TCCSCCEEEE--E
T ss_pred             CCCeEEEEecCCCCCeEEEEEEE--CCCCEEEEEEeCCCCcchhhHHHHHHHHHHHHHhhC------CCCcceEEec--c
Confidence            55666788999999999999984  5678899998654322       2333344333211      1122222222  2


Q ss_pred             eeEEEEEecCCCC
Q 018699          120 YSILVCDYLSQGT  132 (351)
Q Consensus       120 ~~~lv~e~~~~~s  132 (351)
                      ..++|||++.++.
T Consensus        84 ~~~lv~e~l~~~~   96 (288)
T 3f7w_A           84 DRTLAMEWVDERP   96 (288)
T ss_dssp             TTEEEEECCCCCC
T ss_pred             CceEEEEeecccC
Confidence            3478999987654

>2ppq_A HSK, HK, homoserine kinase; structural genomics, MCSG, PSI-2, protein structure initiative; 2.00A {Agrobacterium tumefaciens str} SCOP: d.144.1.6

Probab=96.83  E-value=0.008  Score=52.95  Aligned_cols=76  Identities=8%  Similarity=-0.119  Sum_probs=36.9

Q ss_pred             EEEEeeccCceEEEEEEecCCCCceEEEEecCCC-CCh----HHHHHHHHHhhhccccccccccce---eeecccCeeEE
Q 018699           52 IKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPA-FPW----EFYMYRQLDQRISGRERSSFGFAH---RIHLYSDYSIL  123 (351)
Q Consensus        52 i~~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~-~~~----e~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~l  123 (351)
                      -.+.|+.|....+|++..  .+| .+++|+.... ...    +...++.+....  ...+......   .+....+..++
T Consensus        26 ~~~~i~~G~~n~~~~v~~--~~g-~~vlk~~~~~~~~~~l~~e~~~l~~L~~~g--~~vP~~~~~~~g~~~~~~~g~~~~  100 (322)
T 2ppq_A           26 SYKGIAEGVENSNFLLHT--TKD-PLILTLYEKRVEKNDLPFFLGLMQHLAAKG--LSCPLPLPRKDGELLGELSGRPAA  100 (322)
T ss_dssp             EEEEECC---EEEEEEEE--SSC-CEEEEEECC---CCHHHHHHHHHHHHHHTT--CCCCCBCCBTTCCSCEEETTEEEE
T ss_pred             EeeccCCCcccceEEEEe--CCc-cEEEEEeCCCCCHHHHHHHHHHHHHHHHCC--CCCCcccCCCCCCEEEEECCEEEE
Confidence            356777888899999973  223 5789987762 222    223333333221  1011111100   01112456789


Q ss_pred             EEEecCCCC
Q 018699          124 VCDYLSQGT  132 (351)
Q Consensus       124 v~e~~~~~s  132 (351)
                      ++++++|..
T Consensus       101 l~~~l~G~~  109 (322)
T 2ppq_A          101 LISFLEGMW  109 (322)
T ss_dssp             EEECCCCBC
T ss_pred             EEEeCCCcC
Confidence            999998754

>3i1a_A Spectinomycin phosphotransferase; protein kinase, aminoglycoside phosphotransferase, antibiotic resistance; HET: MES PG4; 1.70A {Legionella pneumophila} PDB: 3i0q_A* 3i0o_A* 3q2m_A*

Probab=96.37  E-value=0.098  Score=46.47  Aligned_cols=73  Identities=8%  Similarity=0.034  Sum_probs=39.8

Q ss_pred             ccCceEEEEEEecCCCCceEEEEecCCCC-ChHHHHHHHHHhhhccccccccccce--eeecccCeeEEEEEecCCCCH
Q 018699           58 QGGFAKVFKAYVNGDPEDVVALKIQKPAF-PWEFYMYRQLDQRISGRERSSFGFAH--RIHLYSDYSILVCDYLSQGTL  133 (351)
Q Consensus        58 ~G~~g~V~~a~~~~~~~~~vaiK~~~~~~-~~e~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~lv~e~~~~~sL  133 (351)
                      .|....||++..  .+| .+++|+..... ..|...++.+...-.......+....  .+....+..+++|+|++|..+
T Consensus        33 ~g~~N~vy~v~~--~~g-~~vLK~~~~~~~~~E~~~l~~L~~~g~~~vp~pi~~~~G~~~~~~~g~~~~l~~~i~G~~~  108 (339)
T 3i1a_A           33 ADTNAFAYQADS--ESK-SYFIKLKYGYHDEINLSIIRLLHDSGIKEIIFPIHTLEAKLFQQLKHFKIIAYPFIHAPNG  108 (339)
T ss_dssp             SCSSCEEEEEEC--SSC-EEEEEEEECSSCCHHHHHHHHHHHTTCCSSCCCCCCTTSCSSEECSSEEEEEEECCCCCBT
T ss_pred             CccccceEEEEe--CCC-CEEEEEecCccchHHHHHHHHHHhcCCcccccceecCCCCEEEEECCEEEEEEeccCCCcC
Confidence            333678999973  334 78899876543 44566665555421100111111100  011235778999999988654

>1zyl_A Hypothetical protein YIHE; putative protein kinase, structural genomics, PSI, protein structure initiative; 2.80A {Escherichia coli} SCOP: d.144.1.6

Probab=96.16  E-value=0.036  Score=48.80  Aligned_cols=29  Identities=10%  Similarity=0.093  Sum_probs=20.5

Q ss_pred             EEeeccCceEEEEEEecCCCCceEEEEecCCC
Q 018699           54 GCAGQGGFAKVFKAYVNGDPEDVVALKIQKPA   85 (351)
Q Consensus        54 ~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~   85 (351)
                      ..++ |....||++..  .+|+.+++|...+.
T Consensus        32 ~~l~-g~~n~~y~v~~--~~g~~~vlK~~~~~   60 (328)
T 1zyl_A           32 TPLN-SYENRVYQFQD--EDRRRFVVKFYRPE   60 (328)
T ss_dssp             EEEC-CSSSEEEEECC--TTCCCEEEEEECTT
T ss_pred             Eeec-CcccceEEEEc--CCCCEEEEEEcCCC
Confidence            3455 77888998863  34567899998743

>3feg_A Choline/ethanolamine kinase; non-protein kinase, choline kinase, structural genomics CONS SGC, hemicholinium-3, phosphorylation; HET: HC7 ADP AMP; 1.30A {Homo sapiens} PDB: 3lq3_A* 2ig7_A*

Probab=95.78  E-value=0.1  Score=47.09  Aligned_cols=33  Identities=24%  Similarity=0.379  Sum_probs=24.7

Q ss_pred             CceecCCCCCcEEEeecCCcceeeccCCCCCcccCCeEEeecCCcc
Q 018699          170 GIIHGDFKPDNLLIRYARDELTVLDHDRSGPWQDQGLCLVDWGRGI  215 (351)
Q Consensus       170 ~i~H~dl~p~Nill~~~~~~~~~~~~~~~~~~~~~~~~l~Dfg~a~  215 (351)
                      .++|+|+.+.||+++.++.             ..+.+.|+||..+.
T Consensus       221 ~~~H~D~~~~Nil~~~~~~-------------~~~~~~~IDwE~a~  253 (379)
T 3feg_A          221 VFCHNDIQEGNILLLSEPE-------------NADSLMLVDFEYSS  253 (379)
T ss_dssp             EEECSCCCGGGEEEESCC----------------CCEEECCCTTCE
T ss_pred             EEEcCCCCCCeEEEcCCCC-------------ccCcEEEEecccCC
Confidence            5899999999999984311             13568999999763

>1nw1_A Choline kinase (49.2 KD); phospholipid synthesis, protein kinase fold, transferase; 2.02A {Caenorhabditis elegans} SCOP: d.144.1.8

Probab=94.77  E-value=0.66  Score=42.54  Aligned_cols=32  Identities=13%  Similarity=0.074  Sum_probs=23.0

Q ss_pred             EEEeeccCceEEEEEEecC------CCCceEEEEecCC
Q 018699           53 KGCAGQGGFAKVFKAYVNG------DPEDVVALKIQKP   84 (351)
Q Consensus        53 ~~~lg~G~~g~V~~a~~~~------~~~~~vaiK~~~~   84 (351)
                      .+.|+.|....+|++....      ..++.+++|+...
T Consensus        78 v~~l~gG~tN~~y~v~~~~~~~~~~~~~~~~vlRi~~~  115 (429)
T 1nw1_A           78 ISRIKGGMSNMLFLCRLSEVYPPIRNEPNKVLLRVYFN  115 (429)
T ss_dssp             EEEECCCTTEEEEEEEECTTSCCSSSCCSEEEEEEECS
T ss_pred             EEEeCCCcccceEEEEeCCCccccCCCCceEEEEEeCC
Confidence            4567778889999998421      1257899999854

>2qg7_A Ethanolamine kinase PV091845; malaria, SGC, structural genomics consortium, transferase; 2.41A {Plasmodium vivax}

Probab=93.30  E-value=0.8  Score=42.42  Aligned_cols=31  Identities=10%  Similarity=-0.011  Sum_probs=21.0

Q ss_pred             EEEeeccCceEEEEEEecCCCCceEEEEecCC
Q 018699           53 KGCAGQGGFAKVFKAYVNGDPEDVVALKIQKP   84 (351)
Q Consensus        53 ~~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~   84 (351)
                      .+.|+.|-...+|++.. ...++.+++|+...
T Consensus       113 i~~lsgG~tN~~y~v~~-~~~~~~~vLRi~g~  143 (458)
T 2qg7_A          113 FQIINGGITNILIKVKD-MSKQAKYLIRLYGP  143 (458)
T ss_dssp             EEEECC--CEEEEEEEE-TTTTEEEEEEEECC
T ss_pred             EEEcCCCeEeEEEEEEE-CCCCceEEEEECCC
Confidence            45677788899999984 33347789998754

>3mes_A Choline kinase; malaria, structural genomics, structural genomics consortium, SGC, transferase; HET: ADP DME PT3; 2.35A {Cryptosporidium parvum}

Probab=91.66  E-value=2.1  Score=39.07  Aligned_cols=28  Identities=21%  Similarity=0.487  Sum_probs=23.6

Q ss_pred             CceecCCCCCcEEEeecCCcceeeccCCCCCcccCCeEEeecCCcc
Q 018699          170 GIIHGDFKPDNLLIRYARDELTVLDHDRSGPWQDQGLCLVDWGRGI  215 (351)
Q Consensus       170 ~i~H~dl~p~Nill~~~~~~~~~~~~~~~~~~~~~~~~l~Dfg~a~  215 (351)
                      .++|+|+.+.||+ +                 .++.+.|+||..+.
T Consensus       263 ~~~H~D~~~~N~l-~-----------------~~~~~~~IDwe~a~  290 (424)
T 3mes_A          263 VFAHNDLQENNLL-Q-----------------TQNNIRMIDYEYSA  290 (424)
T ss_dssp             EEECSCCCGGGEE-E-----------------CSSCEEECCCTTCE
T ss_pred             eEECCCCCcccee-c-----------------CCCcEEEEecccCC
Confidence            5899999999999 5                 56678999999764

>3c5i_A Choline kinase; choline, kinase, malaria, transferase, structural genomics, structural genomics consortium; 2.20A {Plasmodium knowlesi} PDB: 3fi8_A*

Probab=85.22  E-value=0.86  Score=40.65  Aligned_cols=28  Identities=21%  Similarity=0.347  Sum_probs=22.6

Q ss_pred             CceecCCCCCcEEEeecCCcceeeccCCCCCcccCCeEEeecCCcc
Q 018699          170 GIIHGDFKPDNLLIRYARDELTVLDHDRSGPWQDQGLCLVDWGRGI  215 (351)
Q Consensus       170 ~i~H~dl~p~Nill~~~~~~~~~~~~~~~~~~~~~~~~l~Dfg~a~  215 (351)
                      +++|+|+.+.||+++                 .+ .+.|+||..+.
T Consensus       213 ~l~HgDl~~~Nil~~-----------------~~-~~~lID~e~a~  240 (369)
T 3c5i_A          213 VFCHNDLQENNIINT-----------------NK-CLRLIDFEYSG  240 (369)
T ss_dssp             EEECSCCCGGGEEEC-----------------C--CEEECCCTTCE
T ss_pred             EEEeCCCCcccEEec-----------------CC-cEEEEEecCCC
Confidence            689999999999987                 22 37899998663

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	351
d1koba_	352	d.144.1.7 (A:) Twitchin, kinase domain {California	1e-16
d2j4za1	263	d.144.1.7 (A:126-388) Aurora-related kinase 1 (aur	1e-16
d1tkia_	321	d.144.1.7 (A:) Titin, kinase domain {Human (Homo s	2e-16
d1koaa2	350	d.144.1.7 (A:5915-6264) Twitchin, kinase domain {C	2e-16
d1uwha_	276	d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens)	3e-16
d2java1	269	d.144.1.7 (A:3-271) Serine/threonine-protein kinas	4e-16
d2ozaa1	335	d.144.1.7 (A:51-385) MAP kinase activated protein	6e-16
d1yhwa1	293	d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [	1e-15
d1csna_	293	d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast	2e-15
d1xjda_	320	d.144.1.7 (A:) Protein kinase C, theta type {Human	4e-15
d1uu3a_	288	d.144.1.7 (A:) 3-phosphoinositide dependent protei	7e-15
d1phka_	277	d.144.1.7 (A:) gamma-subunit of glycogen phosphory	8e-15
d1ckia_	299	d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus n	1e-14
d1omwa3	364	d.144.1.7 (A:186-549) G-protein coupled receptor k	3e-14
d1blxa_	305	d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (H	3e-14
d1s9ja_	322	d.144.1.7 (A:) Dual specificity mitogen-activated	4e-14
d1rdqe_	350	d.144.1.7 (E:) cAMP-dependent PK, catalytic subuni	7e-14
d2jfla1	288	d.144.1.7 (A:21-308) STE20-like serine/threonine-p	8e-14
d1qpca_	272	d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Hom	9e-14
d3bqca1	328	d.144.1.7 (A:3-330) Protein kinase CK2, alpha subu	1e-13
d1nvra_	271	d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {	1e-13
d1o6ya_	277	d.144.1.7 (A:) Mycobacterial protein kinase PknB,	2e-13
d1xwsa_	273	d.144.1.7 (A:) Proto-oncogene serine/threonine-pro	3e-13
d1byga_	262	d.144.1.7 (A:) Carboxyl-terminal src kinase (csk)	8e-13
d1fota_	316	d.144.1.7 (A:) cAMP-dependent PK, catalytic subuni	1e-12
d1fmka3	285	d.144.1.7 (A:249-533) c-src tyrosine kinase {Human	1e-12
d1lufa_	301	d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus n	2e-12
d1u46a_	273	d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Hum	2e-12
d3blha1	318	d.144.1.7 (A:8-325) Cell division protein kinase 9	2e-12
d1o6la_	337	d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sap	3e-12
d1a06a_	307	d.144.1.7 (A:) Calmodulin-dependent protein kinase	4e-12
d1jpaa_	299	d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mou	4e-12
d1pmea_	345	d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapien	8e-12
d1q5ka_	350	d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gs	9e-12
d2b1pa1	355	d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3	1e-11
d1u5ra_	309	d.144.1.7 (A:) Serine/threonine protein kinase TAO	1e-11
d1t4ha_	270	d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sa	1e-11
d1fgka_	299	d.144.1.7 (A:) Fibroblast growth factor receptor 1	1e-11
d1u59a_	285	d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Hum	2e-11
d1vjya_	303	d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human	2e-11
d1xbba_	277	d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human	3e-11
d1mp8a_	273	d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Huma	4e-11
d1rjba_	325	d.144.1.7 (A:) Fl cytokine receptor {Human (Homo s	4e-11
d1vzoa_	322	d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5	5e-11
d1zara2	191	d.144.1.9 (A:91-281) Rio2 serine protein kinase C-	7e-11
d2gfsa1	348	d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sa	8e-11
d1t46a_	311	d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens	9e-11
d1jksa_	293	d.144.1.7 (A:) Death-associated protein kinase, Da	1e-10
d1unla_	292	d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (H	2e-10
d1q8ya_	362	d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces	2e-10
d1fvra_	309	d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [	2e-10
d1k2pa_	258	d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Hum	4e-10
d1r0pa_	311	d.144.1.7 (A:) Hepatocyte growth factor receptor,	5e-10
d1xkka_	317	d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-	6e-10
d1mqba_	283	d.144.1.7 (A:) epha2 receptor tyrosine kinase {Hum	6e-10
d1sm2a_	263	d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Hu	6e-10
d1p4oa_	308	d.144.1.7 (A:) Insulin-like growth factor 1 recept	7e-10
d1gz8a_	298	d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (H	8e-10
d1ob3a_	286	d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmod	1e-09
d1opja_	287	d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mou	2e-09
d1cm8a_	346	d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo s	3e-09
d1ywna1	299	d.144.1.7 (A:818-1166) Vascular endothelial growth	3e-09
d1ua2a_	299	d.144.1.7 (A:) Cell division protein kinase 7, CDK	5e-09

>d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]} Length = 352

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]

 Score = 77.8 bits (191), Expect = 1e-16
 Identities = 42/224 (18%), Positives = 81/224 (36%), Gaps = 38/224 (16%)

Query: 49  KYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFPWEFYMYRQLDQRISGRER--- 105
            Y I    G G F  V +         V   K     +P + Y  +         E    
Sbjct: 30  YYDILEELGSGAFGVVHRCVEKATGR-VFVAKFINTPYPLDKYTVK--------NEISIM 80

Query: 106 SSFGFAHRIHLY-----SDYSILVCDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEML 160
           +       I+L+         +L+ ++LS G L D I +       M E   I Y  +  
Sbjct: 81  NQLHHPKLINLHDAFEDKYEMVLILEFLSGGELFDRIAAE---DYKMSEAEVINYMRQAC 137

Query: 161 CILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSGPWQDQGLCLVDWGRGIDLHLF 220
             L+ +H+  I+H D KP+N++    +                  + ++D+G    L+  
Sbjct: 138 EGLKHMHEHSIVHLDIKPENIMCETKKASS---------------VKIIDFGLATKLN-- 180

Query: 221 PDNMEFEGDCRTSGFRCIEMQEKKPWKFQVDTYGLCAIVHMMLH 264
             +   +    T+ F   E+ +++P  F  D + +  + +++L 
Sbjct: 181 -PDEIVKVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLS 223

>d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 263

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Aurora-related kinase 1 (aurora-2)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 76.6 bits (188), Expect = 1e-16
 Identities = 44/221 (19%), Positives = 79/221 (35%), Gaps = 33/221 (14%)

Query: 48  KKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFPWEFYMYRQLDQRISGRERSS 107
           + ++I    G+G F  V+ A        ++ALK+   A   +  +  QL + +    +S 
Sbjct: 6   EDFEIGRPLGKGKFGNVYLAREKQSKF-ILALKVLFKAQLEKAGVEHQLRREV--EIQSH 62

Query: 108 FGFAHRIHLY-----SDYSILVCDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCI 162
               + + LY     +    L+ +Y   GT+   +          +E     Y  E+   
Sbjct: 63  LRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKL----SKFDEQRTATYITELANA 118

Query: 163 LESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSGPWQDQGLCLVDWGRGIDLHLFPD 222
           L   H   +IH D KP+NLL+                      L + D+G      +   
Sbjct: 119 LSYCHSKRVIHRDIKPENLLLG-----------------SAGELKIADFG----WSVHAP 157

Query: 223 NMEFEGDCRTSGFRCIEMQEKKPWKFQVDTYGLCAIVHMML 263
           +      C T  +   EM E +    +VD + L  + +  L
Sbjct: 158 SSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFL 198

>d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]} Length = 321

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Titin, kinase domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 76.6 bits (188), Expect = 2e-16
 Identities = 39/223 (17%), Positives = 80/223 (35%), Gaps = 39/223 (17%)

Query: 49  KYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFPWEFYMYRQLDQRISGRERSSF 108
           KY I    G+G F  V +       +     K  K          +  DQ +  +E S  
Sbjct: 6   KYMIAEDLGRGEFGIVHRCVETSSKK-TYMAKFVKV---------KGTDQVLVKKEISIL 55

Query: 109 G-FAHR--IHLY-----SDYSILVCDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEML 160
               HR  +HL+      +  +++ +++S   + + IN+       + E   + Y  ++ 
Sbjct: 56  NIARHRNILHLHESFESMEELVMIFEFISGLDIFERINTS---AFELNEREIVSYVHQVC 112

Query: 161 CILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSGPWQDQGLCLVDWGRGIDLHLF 220
             L+ LH   I H D +P+N++              RS       + ++++G+       
Sbjct: 113 EALQFLHSHNIGHFDIRPENII----------YQTRRSST-----IKIIEFGQA---RQL 154

Query: 221 PDNMEFEGDCRTSGFRCIEMQEKKPWKFQVDTYGLCAIVHMML 263
                F        +   E+ +        D + L  +V+++L
Sbjct: 155 KPGDNFRLLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLL 197

>d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: Caenorhabditis elegans, pjk4 [TaxId: 6239]

 Score = 77.0 bits (189), Expect = 2e-16
 Identities = 39/227 (17%), Positives = 73/227 (32%), Gaps = 46/227 (20%)

Query: 49  KYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKI-------QKPAFPWEFYMYRQLDQRIS 101
            Y I    G G F  V +           A K         K     E      L     
Sbjct: 27  HYDIHEELGTGAFGVVHRVTERATGN-NFAAKFVMTPHESDKETVRKEIQTMSVLRHP-- 83

Query: 102 GRERSSFGFAHRIHLY-----SDYSILVCDYLSQGTLQDAINSYVVIGKSMEEVLCIYYT 156
                       ++L+      +  +++ +++S G L + +         M E   + Y 
Sbjct: 84  ----------TLVNLHDAFEDDNEMVMIYEFMSGGELFEKVADE---HNKMSEDEAVEYM 130

Query: 157 IEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSGPWQDQGLCLVDWGRGID 216
            ++   L  +H+   +H D KP+N++              RS       L L+D+G    
Sbjct: 131 RQVCKGLCHMHENNYVHLDLKPENIM----------FTTKRSNE-----LKLIDFG---L 172

Query: 217 LHLFPDNMEFEGDCRTSGFRCIEMQEKKPWKFQVDTYGLCAIVHMML 263
                     +    T+ F   E+ E KP  +  D + +  + +++L
Sbjct: 173 TAHLDPKQSVKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILL 219

>d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 276

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: B-Raf kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 75.8 bits (186), Expect = 3e-16
 Identities = 42/229 (18%), Positives = 84/229 (36%), Gaps = 38/229 (16%)

Query: 44  EIGGKKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFPWEFYMYRQLDQ-RISG 102
           EI   +  +    G G F  V+K   +GD    VA+K+     P    +    ++  +  
Sbjct: 4   EIPDGQITVGQRIGSGSFGTVYKGKWHGD----VAVKMLNVTAPTPQQLQAFKNEVGVLR 59

Query: 103 RERSS-----FGFAHRIHLYSDYSILVCDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTI 157
           + R        G++    L      +V  +    +L   ++    I    E +  I    
Sbjct: 60  KTRHVNILLFMGYSTAPQLA-----IVTQWCEGSSLYHHLHI---IETKFEMIKLIDIAR 111

Query: 158 EMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSGPWQDQGLCLVDWGRGIDL 217
           +    ++ LH   IIH D K +N+ +                  +D  + + D+G     
Sbjct: 112 QTAQGMDYLHAKSIIHRDLKSNNIFLH-----------------EDLTVKIGDFGLATVK 154

Query: 218 HLFPDNMEFEGDCRTSGFRCIEM---QEKKPWKFQVDTYGLCAIVHMML 263
             +  + +FE    +  +   E+   Q+K P+ FQ D Y    +++ ++
Sbjct: 155 SRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELM 203

>d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]} Length = 269

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine-protein kinase Nek2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 75.0 bits (184), Expect = 4e-16
 Identities = 36/228 (15%), Positives = 72/228 (31%), Gaps = 39/228 (17%)

Query: 49  KYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKI---------QKPAFPWEFYMYRQLDQR 99
            Y++    G G + +  K     D + ++  K          +K     E  + R+L   
Sbjct: 5   DYEVLYTIGTGSYGRCQKIRRKSDGK-ILVWKELDYGSMTEAEKQMLVSEVNLLRELKHP 63

Query: 100 ISGRERSSFGFAHRIHLYSDYSILVCDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEM 159
              R            LY     +V +Y   G L   I       + ++E   +    ++
Sbjct: 64  NIVRYYDRIIDRTNTTLY-----IVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQL 118

Query: 160 LCILESLHDVG-----IIHGDFKPDNLLIRYARDELTVLDHDRSGPWQDQGLCLVDWGRG 214
              L+  H        ++H D KP N+ +                    Q + L D+  G
Sbjct: 119 TLALKECHRRSDGGHTVLHRDLKPANVFL-----------------DGKQNVKLGDF--G 159

Query: 215 IDLHLFPDNMEFEGDCRTSGFRCIEMQEKKPWKFQVDTYGLCAIVHMM 262
           +   L  D    +    T  +   E   +  +  + D + L  +++ +
Sbjct: 160 LARILNHDTSFAKAFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYEL 207

>d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]} Length = 335

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase activated protein kinase 2, mapkap2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 75.5 bits (185), Expect = 6e-16
 Identities = 40/227 (17%), Positives = 76/227 (33%), Gaps = 29/227 (12%)

Query: 39  RNKTIEIGGKKYQIKG-CAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFPWEFYMYRQLD 97
           +N  I+     Y++     G G   KV + +     E   ALK+ +     +     +L 
Sbjct: 6   KNAIID----DYKVTSQVLGLGINGKVLQIFNKRTQE-KFALKMLQDCP--KARREVELH 58

Query: 98  QRISGRER--SSFGFAHRIHLYSDYSILVCDYLSQGTLQDAINSYVVIGKSMEEVLCIYY 155
            R S              ++      ++V + L  G L   I       ++  E      
Sbjct: 59  WRASQCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDR--GDQAFTEREASEI 116

Query: 156 TIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSGPWQDQGLCLVDWGRGI 215
              +   ++ LH + I H D KP+NLL               +    +  L L D+G   
Sbjct: 117 MKSIGEAIQYLHSINIAHRDVKPENLLY--------------TSKRPNAILKLTDFGFAK 162

Query: 216 DLHLFPDNMEFEGDCRTSGFRCIEMQEKKPWKFQVDTYGLCAIVHMM 262
           +      +      C T  +   E+   + +    D + L  I++++
Sbjct: 163 ETT---SHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYIL 206

>d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: pak1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 73.9 bits (181), Expect = 1e-15
 Identities = 48/224 (21%), Positives = 77/224 (34%), Gaps = 41/224 (18%)

Query: 48  KKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFPWEFYMYRQLDQRISGRER-- 105
           KKY      GQG    V+ A      +  VA++             +Q  + +   E   
Sbjct: 20  KKYTRFEKIGQGASGTVYTAMDVATGQ-EVAIRQMNLQ--------QQPKKELIINEILV 70

Query: 106 -SSFGFAHRIHLY-----SDYSILVCDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEM 159
                  + ++        D   +V +YL+ G+L D +         M+E        E 
Sbjct: 71  MRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTE-----TCMDEGQIAAVCREC 125

Query: 160 LCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSGPWQDQGLCLVDWGRGIDLHL 219
           L  LE LH   +IH D K DN+L          L  D S    D G C           +
Sbjct: 126 LQALEFLHSNQVIHRDIKSDNIL----------LGMDGSVKLTDFGFC---------AQI 166

Query: 220 FPDNMEFEGDCRTSGFRCIEMQEKKPWKFQVDTYGLCAIVHMML 263
            P+  +      T  +   E+  +K +  +VD + L  +   M+
Sbjct: 167 TPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMI 210

>d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]

 Score = 73.7 bits (180), Expect = 2e-15
 Identities = 41/232 (17%), Positives = 74/232 (31%), Gaps = 33/232 (14%)

Query: 47  GKKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKI-----QKPAFPWEFYMYRQLDQRIS 101
           G  Y++    G+G F  +F+     + +  VA+K        P    E+  Y+ L     
Sbjct: 4   GVHYKVGRRIGEGSFGVIFEGTNLLNNQ-QVAIKFEPRRSDAPQLRDEYRTYKLL----- 57

Query: 102 GRERSSFGFAHRIHLYSDYSILVCDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLC 161
               +     +       +++LV D L               G+            +ML 
Sbjct: 58  -AGCTGIPNVYYFGQEGLHNVLVIDLLGPSLEDLLDLC----GRKFSVKTVAMAAKQMLA 112

Query: 162 ILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSGPWQDQGLCLVDWG-----RGID 216
            ++S+H+  +++ D KPDN LI             R        + +VD+G     R   
Sbjct: 113 RVQSIHEKSLVYRDIKPDNFLI------------GRPNSKNANMIYVVDFGMVKFYRDPV 160

Query: 217 LHLFPDNMEFEGDCRTSGFRCIEMQEKKPWKFQVDTYGLCAIVHMMLHNSYM 268
                   E +    T+ +  I     +    + D   L  +    L  S  
Sbjct: 161 TKQHIPYREKKNLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLP 212

>d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]} Length = 320

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase C, theta type
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 72.8 bits (178), Expect = 4e-15
 Identities = 44/221 (19%), Positives = 81/221 (36%), Gaps = 34/221 (15%)

Query: 50  YQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFPWEFYMYRQLDQRISGRERSSFG 109
           + +    G+G F KVF A      +   A+K  K        M   ++  +  +   S  
Sbjct: 4   FILHKMLGKGSFGKVFLAEFKKTNQ-FFAIKALKKDV---VLMDDDVECTMVEKRVLSLA 59

Query: 110 FAHR--IHLY-----SDYSILVCDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCI 162
           + H    H++      +    V +YL+ G L   I S        +     +Y  E++  
Sbjct: 60  WEHPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQS----CHKFDLSRATFYAAEIILG 115

Query: 163 LESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSGPWQDQGLCLVDWGRGIDLHLFPD 222
           L+ LH  GI++ D K DN+L             D+ G        + D+  G+       
Sbjct: 116 LQFLHSKGIVYRDLKLDNIL------------LDKDGHI-----KIADF--GMCKENMLG 156

Query: 223 NMEFEGDCRTSGFRCIEMQEKKPWKFQVDTYGLCAIVHMML 263
           + +    C T  +   E+   + +   VD +    +++ ML
Sbjct: 157 DAKTNTFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEML 197

>d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 288

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: 3-phosphoinositide dependent protein kinase-1 Pdk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 71.6 bits (175), Expect = 7e-15
 Identities = 45/226 (19%), Positives = 74/226 (32%), Gaps = 41/226 (18%)

Query: 49  KYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKI------QKPAFPWEFYMYRQLDQRISG 102
            ++     G+G F+ V  A          A+KI       K          R +  R+  
Sbjct: 9   DFKFGKILGEGSFSTVVLARELATSR-EYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 67

Query: 103 RERSSFGFAHRIHLY-----SDYSILVCDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTI 157
                      + LY      +       Y   G L   I        S +E    +YT 
Sbjct: 68  P--------FFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKI----GSFDETCTRFYTA 115

Query: 158 EMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSGPWQDQGLCLVDWGRGIDL 217
           E++  LE LH  GIIH D KP+N+L+                  +D  + + D+G    L
Sbjct: 116 EIVSALEYLHGKGIIHRDLKPENILL-----------------NEDMHIQITDFGTAKVL 158

Query: 218 HLFPDNMEFEGDCRTSGFRCIEMQEKKPWKFQVDTYGLCAIVHMML 263
                         T+ +   E+  +K      D + L  I++ ++
Sbjct: 159 SPESKQARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLV 204

>d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: gamma-subunit of glycogen phosphorylase kinase (Phk)
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

 Score = 71.6 bits (175), Expect = 8e-15
 Identities = 42/227 (18%), Positives = 74/227 (32%), Gaps = 33/227 (14%)

Query: 49  KYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFPWEFYMYRQLDQRISGRE---- 104
            Y+ K   G+G  + V +       ++     I             Q  +  + +E    
Sbjct: 4   NYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDIL 63

Query: 105 RSSFGFAHRIHLYSDYS-----ILVCDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEM 159
           R   G  + I L   Y       LV D + +G L D +        ++ E         +
Sbjct: 64  RKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTE----KVTLSEKETRKIMRAL 119

Query: 160 LCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSGPWQDQGLCLVDWGRGIDLHL 219
           L ++ +LH + I+H D KP+N+L+                   D  + L D+G    L  
Sbjct: 120 LEVICALHKLNIVHRDLKPENILLD-----------------DDMNIKLTDFGFSCQLDP 162

Query: 220 FPDNMEFEGDCRTSG---FRCIEMQEKKPWKFQVDTYGLCAIVHMML 263
                E  G           C        +  +VD +    I++ +L
Sbjct: 163 GEKLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLL 209

>d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 71.4 bits (174), Expect = 1e-14
 Identities = 37/227 (16%), Positives = 68/227 (29%), Gaps = 25/227 (11%)

Query: 47  GKKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKI-----QKPAFPWEFYMYRQLDQRIS 101
           G +Y++    G G F  ++        E  VA+K+     + P    E  +Y+ +     
Sbjct: 6   GNRYRLGRKIGSGSFGDIYLGTDIAAGE-EVAIKLECVKTKHPQLHIESKIYKMM----- 59

Query: 102 GRERSSFGFAHRIHLYSDYSILVCDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLC 161
            +               DY+++V + L                +       +    +M+ 
Sbjct: 60  -QGGVGIPTIRWCGAEGDYNVMVMELLGPSLEDLFNF----CSRKFSLKTVLLLADQMIS 114

Query: 162 ILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSGPWQDQGLCLVDWGRGIDLHLFP 221
            +E +H    IH D KPDN L+   +    V   D     +          R    H   
Sbjct: 115 RIEYIHSKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKK---------YRDARTHQHI 165

Query: 222 DNMEFEGDCRTSGFRCIEMQEKKPWKFQVDTYGLCAIVHMMLHNSYM 268
              E +    T+ +  I          + D   L  ++      S  
Sbjct: 166 PYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLP 212

>d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]} Length = 364

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: G-protein coupled receptor kinase 2
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 70.9 bits (173), Expect = 3e-14
 Identities = 38/220 (17%), Positives = 77/220 (35%), Gaps = 31/220 (14%)

Query: 50  YQIKGCAGQGGFAKVFKAYVNGDPEDVVALK-IQKPAFPWEFYMYRQLDQRISGRERSSF 108
           + +    G+GGF +V+      D   + A+K + K     +      L++RI     S+ 
Sbjct: 6   FSVHRIIGRGGFGEVYGCR-KADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTG 64

Query: 109 GFAHRIHLY-----SDYSILVCDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCIL 163
                + +       D    + D ++ G L   ++ +        E    +Y  E++  L
Sbjct: 65  DCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQH----GVFSEADMRFYAAEIILGL 120

Query: 164 ESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSGPWQDQGLCLVDWGRGIDLHLFPDN 223
           E +H+  +++ D KP N+L+            D  G      + + D G   D   F   
Sbjct: 121 EHMHNRFVVYRDLKPANILL------------DEHGH-----VRISDLGLACD---FSKK 160

Query: 224 MEFEGDCRTSGFRCIEMQEKKPWKFQVDTYGLCAIVHMML 263
                           +Q+   +    D + L  ++  +L
Sbjct: 161 KPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLL 200

>d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]} Length = 305

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK6
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 69.9 bits (170), Expect = 3e-14
 Identities = 40/227 (17%), Positives = 72/227 (31%), Gaps = 33/227 (14%)

Query: 48  KKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFPWEFYMYRQLDQRISGRERSS 107
           ++Y+     G+G + KVFKA    +    VALK  +     E      + +    R   +
Sbjct: 7   QQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLET 66

Query: 108 FGFAHRIHLYS----------DYSILVCDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTI 157
           F   + + L+               LV +++ Q                +          
Sbjct: 67  FEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVP---EPGVPTETIKDMMF 123

Query: 158 EMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSGPWQDQGLCLVDWGRGIDL 217
           ++L  L+ LH   ++H D KP N+L+                   D GL           
Sbjct: 124 QLLRGLDFLHSHRVVHRDLKPQNILV----------TSSGQIKLADFGLA---------- 163

Query: 218 HLFPDNMEFEGDCRTSGFRCIEMQEKKPWKFQVDTYGLCAIVHMMLH 264
            ++   M       T  +R  E+  +  +   VD + +  I   M  
Sbjct: 164 RIYSFQMALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFR 210

>d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 70.1 bits (171), Expect = 4e-14
 Identities = 43/318 (13%), Positives = 88/318 (27%), Gaps = 51/318 (16%)

Query: 43  IEIGGKKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKI----QKPAFPWEFYMYRQLDQ 98
           +E+    ++     G G    VFK         V+A K+     KPA   +     Q+  
Sbjct: 1   MELKDDDFEKISELGAGNGGVVFKVSHKPSGL-VMARKLIHLEIKPAIRNQIIRELQVLH 59

Query: 99  RISGRERSSFGFAHRIHLY-----SDYSILVCDYLSQGTLQDAINSYVVIGKSMEEVLCI 153
             +          + +  Y          +  +++  G+L   +         + E +  
Sbjct: 60  ECNSP--------YIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKA----GRIPEQILG 107

Query: 154 YYTIEMLCILESLHDV-GIIHGDFKPDNLLIRYARDELTVLDHDRSGPWQDQGLCLVDWG 212
             +I ++  L  L +   I+H D KP N+L+                      + L D+G
Sbjct: 108 KVSIAVIKGLTYLREKHKIMHRDVKPSNILVN-----------------SRGEIKLCDFG 150

Query: 213 RGIDLHLFPDNMEFEGDCRTSGFRCIEMQEKKPWKFQVDTYGLCAIVHMML-------HN 265
               +     +        T  +   E  +   +  Q D + +   +  M          
Sbjct: 151 ----VSGQLIDSMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPP 206

Query: 266 SYMEIEKKASPDGGLVYLPKLSFKRYWKVELWKSLFTNLLNMSSGNDKEVLQNLQKSFQD 325
              E+E                  R     L      +   M+     + + N       
Sbjct: 207 DAKELELMFGCQVEGDAAETPPRPRTPGRPLSSYGMDSRPPMAIFELLDYIVNEPPPKLP 266

Query: 326 YLCSNPQLLKNLKELLAK 343
               + +    + + L K
Sbjct: 267 SGVFSLEFQDFVNKCLIK 284

>d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 69.4 bits (169), Expect = 7e-14
 Identities = 37/222 (16%), Positives = 69/222 (31%), Gaps = 30/222 (13%)

Query: 49  KYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFPWEFYMYRQLDQRISGRERSSF 108
           ++      G G F +V             A+KI       +              +  +F
Sbjct: 42  QFDRIKTLGTGSFGRVMLVKHKESGN-HYAMKILDKQKVVKLKQIEHTLNEKRILQAVNF 100

Query: 109 GFAHRIHLYSD---YSILVCDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILES 165
            F  ++           +V +Y++ G +   +           E    +Y  +++   E 
Sbjct: 101 PFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRI----GRFSEPHARFYAAQIVLTFEY 156

Query: 166 LHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSGPWQDQGLCLVDWGRGIDLHLFPDNME 225
           LH + +I+ D KP+NLL          +D        D G      GR   L   P+ + 
Sbjct: 157 LHSLDLIYRDLKPENLL----------IDQQGYIQVTDFGFAKRVKGRTWTLCGTPEAL- 205

Query: 226 FEGDCRTSGFRCIEMQEKKPWKFQVDTYGLCAIVHMMLHNSY 267
                        E+   K +   VD + L  +++ M     
Sbjct: 206 -----------APEIILSKGYNKAVDWWALGVLIYEMAAGYP 236

>d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]} Length = 288

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: STE20-like serine/threonine-protein kinase, SLK
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 68.9 bits (168), Expect = 8e-14
 Identities = 36/222 (16%), Positives = 71/222 (31%), Gaps = 34/222 (15%)

Query: 50  YQIKGCAGQGGFAKVFKAYVNGDPEDVVALKI---QKPAFPWEFYMYRQLDQRISGRERS 106
           ++I G  G G F KV+KA        + A K+   +      ++ +   +          
Sbjct: 14  WEIIGELGDGAFGKVYKAQNKETSV-LAAAKVIDTKSEEELEDYMVEIDILASCDHPNIV 72

Query: 107 SFGFAHRIHLYSDYSILVCDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESL 166
                     Y +   ++ ++ + G +   +       + + E        + L  L  L
Sbjct: 73  KL---LDAFYYENNLWILIEFCAGGAVDAVMLEL---ERPLTESQIQVVCKQTLDALNYL 126

Query: 167 HDVGIIHGDFKPDNLLIRYARDELTVLDHDRSGPWQDQGLCLVDWGRGIDLHLFPDNMEF 226
           HD  IIH D K  N+L             D         + L D+  G+           
Sbjct: 127 HDNKIIHRDLKAGNIL----------FTLDGD-------IKLADF--GVSAKNTRTIQRR 167

Query: 227 EGDCRTSGFRCIEM-----QEKKPWKFQVDTYGLCAIVHMML 263
           +    T  +   E+      + +P+ ++ D + L   +  M 
Sbjct: 168 DSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMA 209

>d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]} Length = 272

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Lymphocyte kinase (lck)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 68.5 bits (167), Expect = 9e-14
 Identities = 33/226 (14%), Positives = 75/226 (33%), Gaps = 36/226 (15%)

Query: 44  EIGGKKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKI--QKPAFPWEFYMYRQLDQRIS 101
           E+  +  ++    G G F +V+  Y NG     VA+K   Q    P  F     L +++ 
Sbjct: 9   EVPRETLKLVERLGAGQFGEVWMGYYNGH--TKVAVKSLKQGSMSPDAFLAEANLMKQLQ 66

Query: 102 GRERSSFGFAHRIHLY----SDYSILVCDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTI 157
            +          + LY     +   ++ +Y+  G+L D + +    G  +     +    
Sbjct: 67  HQ--------RLVRLYAVVTQEPIYIITEYMENGSLVDFLKTPS--GIKLTINKLLDMAA 116

Query: 158 EMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSGPWQDQGLCLVDWGRGIDL 217
           ++   +  + +   IH D +  N+L+                        + D+G    +
Sbjct: 117 QIAEGMAFIEERNYIHRDLRAANILV-----------------SDTLSCKIADFGLARLI 159

Query: 218 HLFPDNMEFEGDCRTSGFRCIEMQEKKPWKFQVDTYGLCAIVHMML 263
               +    EG      +   E      +  + D +    ++  ++
Sbjct: 160 E-DNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIV 204

>d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]} Length = 328

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase CK2, alpha subunit
species: Rattus norvegicus [TaxId: 10116]

 Score = 68.3 bits (166), Expect = 1e-13
 Identities = 43/228 (18%), Positives = 93/228 (40%), Gaps = 29/228 (12%)

Query: 39  RNKTIEIGGK-KYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFPWEFYMYRQLD 97
            +  +E G +  YQ+    G+G +++VF+A    + E  V +KI KP    +     ++ 
Sbjct: 25  ESHVVEWGNQDDYQLVRKLGRGKYSEVFEAINITNNE-KVVVKILKPVKKKKIKREIKIL 83

Query: 98  QRISGRERSSFGFAHRIHLYSDYSILVCDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTI 157
           + + G               S    LV ++++    +          +++ +    +Y  
Sbjct: 84  ENLRGGPNIITLADIVKDPVSRTPALVFEHVNNTDFKQLY-------QTLTDYDIRFYMY 136

Query: 158 EMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSGPWQDQGLCLVDWGRGIDL 217
           E+L  L+  H +GI+H D KP N++I +                + + L L+DWG     
Sbjct: 137 EILKALDYCHSMGIMHRDVKPHNVMIDH----------------EHRKLRLIDWGLA--- 177

Query: 218 HLFPDNMEFEGDCRTSGFRCIE-MQEKKPWKFQVDTYGLCAIVHMMLH 264
             +    E+     +  F+  E + + + + + +D + L  ++  M+ 
Sbjct: 178 EFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIF 225

>d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 271

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell cycle checkpoint kinase chk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 67.7 bits (165), Expect = 1e-13
 Identities = 40/223 (17%), Positives = 73/223 (32%), Gaps = 24/223 (10%)

Query: 48  KKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFPWEFYMYRQLDQRISGRERSS 107
           + + +    G+G + +V  A      E  VA+KI       +     + +  I+      
Sbjct: 5   EDWDLVQTLGEGAYGEVQLAVNRVTEE-AVAVKIVDMKRAVDCPENIKKEICINKMLNHE 63

Query: 108 FGFA-HRIHLYSDYSILVCDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESL 166
                +      +   L  +Y S G L D I         M E     +  +++  +  L
Sbjct: 64  NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEP----DIGMPEPDAQRFFHQLMAGVVYL 119

Query: 167 HDVGIIHGDFKPDNLLIRYARDELTVLDHDRSGPWQDQGLCLVDWGRGIDLHLFPDNMEF 226
           H +GI H D KP+NLL+                  +   L + D+G              
Sbjct: 120 HGIGITHRDIKPENLLLD-----------------ERDNLKISDFGLATVFRYNNRERLL 162

Query: 227 EGDCRTSGFRCIEM-QEKKPWKFQVDTYGLCAIVHMMLHNSYM 268
              C T  +   E+ + ++     VD +    ++  ML     
Sbjct: 163 NKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELP 205

>d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Mycobacterial protein kinase PknB, catalytic domain
species: Mycobacterium tuberculosis [TaxId: 1773]

 Score = 67.1 bits (163), Expect = 2e-13
 Identities = 36/223 (16%), Positives = 74/223 (33%), Gaps = 30/223 (13%)

Query: 49  KYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFPWEFYMYRQLDQRISGRERSS- 107
           +Y++    G GG ++V  A         VA+K+ +     +   Y +  +        + 
Sbjct: 8   RYELGEILGFGGMSEVHLARDLRLHR-DVAVKVLRADLARDPSFYLRFRREAQNAAALNH 66

Query: 108 ------FGFAHRIHLYSDYSILVCDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLC 161
                 +              +V +Y+   TL+D +++       M     I    +   
Sbjct: 67  PAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTE----GPMTPKRAIEVIADACQ 122

Query: 162 ILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSGPWQDQGLCLVDWGRGIDLHLFP 221
            L   H  GIIH D KP N++I                      + ++D+G    +    
Sbjct: 123 ALNFSHQNGIIHRDVKPANIMIS-----------------ATNAVKVMDFGIARAIADSG 165

Query: 222 DNMEFEGD-CRTSGFRCIEMQEKKPWKFQVDTYGLCAIVHMML 263
           +++        T+ +   E         + D Y L  +++ +L
Sbjct: 166 NSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVL 208

>d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Proto-oncogene serine/threonine-protein kinase Pim-1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 67.0 bits (163), Expect = 3e-13
 Identities = 41/249 (16%), Positives = 86/249 (34%), Gaps = 33/249 (13%)

Query: 48  KKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAF---PWEFYMYRQLDQRISGRE 104
            +YQ+    G GGF  V+      D    VA+K  +        E     ++   +   +
Sbjct: 4   SQYQVGPLLGSGGFGSVYSGIRVSDNL-PVAIKHVEKDRISDWGELPNGTRVPMEVVLLK 62

Query: 105 RSSFGFAHRIHLY-----SDYSILVCDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEM 159
           + S GF+  I L       D  +L+ +             ++    +++E L   +  ++
Sbjct: 63  KVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLF---DFITERGALQEELARSFFWQV 119

Query: 160 LCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSGPWQDQGLCLVDWGRGIDLHL 219
           L  +   H+ G++H D K +N+LI   R EL ++D       +D                
Sbjct: 120 LEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDF---------- 169

Query: 220 FPDNMEFEGDCRTSGFRCIE-MQEKKPWKFQVDTYGLCAIVHMMLHNSYMEIEKKASPDG 278
                       T  +   E ++  +        + L  +++ M+         +    G
Sbjct: 170 ----------DGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRG 219

Query: 279 GLVYLPKLS 287
            + +  ++S
Sbjct: 220 QVFFRQRVS 228

>d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]} Length = 262

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Carboxyl-terminal src kinase (csk)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 65.4 bits (159), Expect = 8e-13
 Identities = 32/227 (14%), Positives = 75/227 (33%), Gaps = 42/227 (18%)

Query: 44  EIGGKKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALK-IQKPAFPWEFYMYRQLDQRISG 102
            +  K+ ++    G+G F  V      G+    VA+K I+  A    F     +  ++  
Sbjct: 3   ALNMKELKLLQTIGKGEFGDVMLGDYRGNK---VAVKCIKNDATAQAFLAEASVMTQLRH 59

Query: 103 RERSSFGFAHRIHLY------SDYSILVCDYLSQGTLQDAINSYVVIGKSMEEVLCIYYT 156
                    + + L            +V +Y+++G+L D + S       +     + ++
Sbjct: 60  S--------NLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRG--RSVLGGDCLLKFS 109

Query: 157 IEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSGPWQDQGLCLVDWGRGID 216
           +++   +E L     +H D    N+L+                  +D    + D+G   +
Sbjct: 110 LDVCEAMEYLEGNNFVHRDLAARNVLVS-----------------EDNVAKVSDFGLTKE 152

Query: 217 LHLFPDNMEFEGDCRTSGFRCIEMQEKKPWKFQVDTYGLCAIVHMML 263
                D            +   E   +K +  + D +    ++  + 
Sbjct: 153 ASSTQDTG-----KLPVKWTAPEALREKKFSTKSDVWSFGILLWEIY 194

>d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 316

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 65.5 bits (159), Expect = 1e-12
 Identities = 40/222 (18%), Positives = 77/222 (34%), Gaps = 34/222 (15%)

Query: 48  KKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFPWEFYMYRQLDQRISGRERSS 107
           + +QI    G G F +V       +     A+K+ K             +        S 
Sbjct: 4   QDFQILRTLGTGSFGRVHLIRSRHNGR-YYAMKVLKKEIVVRLKQVEHTNDER--LMLSI 60

Query: 108 FGFAHRIHLY-----SDYSILVCDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCI 162
                 I ++     +    ++ DY+  G L       +   +     +  +Y  E+   
Sbjct: 61  VTHPFIIRMWGTFQDAQQIFMIMDYIEGGELFS----LLRKSQRFPNPVAKFYAAEVCLA 116

Query: 163 LESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSGPWQDQGLCLVDWGRGIDLHLFPD 222
           LE LH   II+ D KP+N+L+            D++G      + + D+G    +     
Sbjct: 117 LEYLHSKDIIYRDLKPENILL------------DKNGH-----IKITDFGFAKYVPDVTY 159

Query: 223 NMEFEGDCRTSGFRCIEMQEKKPWKFQVDTYGLCAIVHMMLH 264
            +     C T  +   E+   KP+   +D +    +++ ML 
Sbjct: 160 TL-----CGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLA 196

>d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-src tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 65.1 bits (158), Expect = 1e-12
 Identities = 36/226 (15%), Positives = 80/226 (35%), Gaps = 36/226 (15%)

Query: 44  EIGGKKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAF--PWEFYMYRQLDQRIS 101
           EI  +  +++   GQG F +V+    NG     VA+K  KP    P  F    Q+ +++ 
Sbjct: 13  EIPRESLRLEVKLGQGCFGEVWMGTWNGT--TRVAIKTLKPGTMSPEAFLQEAQVMKKLR 70

Query: 102 GRERSSFGFAHRIHLYS----DYSILVCDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTI 157
                       + LY+    +   +V +Y+S+G+L D +      GK +     +    
Sbjct: 71  HE--------KLVQLYAVVSEEPIYIVTEYMSKGSLLDFLKGE--TGKYLRLPQLVDMAA 120

Query: 158 EMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSGPWQDQGLCLVDWGRGIDL 217
           ++   +  +  +  +H D +  N+L          +  +           + D+G    +
Sbjct: 121 QIASGMAYVERMNYVHRDLRAANIL----------VGENLV-------CKVADFGLARLI 163

Query: 218 HLFPDNMEFEGDCRTSGFRCIEMQEKKPWKFQVDTYGLCAIVHMML 263
               +    +G      +   E      +  + D +    ++  + 
Sbjct: 164 E-DNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELT 208

>d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 301

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Musk tyrosine kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 64.9 bits (157), Expect = 2e-12
 Identities = 28/251 (11%), Positives = 72/251 (28%), Gaps = 42/251 (16%)

Query: 39  RNKTIEIGGKKYQIKGCAGQGGFAKVFKAYVNGDPED----VVALKIQKPAFPWEFYMYR 94
           +  ++E      +     G+G F +VF+A   G        +VA+K+ K     +     
Sbjct: 4   KLLSLEYPRNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADF 63

Query: 95  QLDQRISGRERSSFG-FAHRIHLYSDYSILVCDYLSQGTLQDAINSY------------- 140
           Q +  +     +        +        L+ +Y++ G L + + S              
Sbjct: 64  QREAALMAEFDNPNIVKLLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDL 123

Query: 141 -------VVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVL 193
                        +     +    ++   +  L +   +H D    N L+          
Sbjct: 124 STRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSERKFVHRDLATRNCLVG--------- 174

Query: 194 DHDRSGPWQDQGLCLVDWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQEKKPWKFQVDTY 253
                   ++  + + D+G   +++          D     +   E      +  + D +
Sbjct: 175 --------ENMVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVW 226

Query: 254 GLCAIVHMMLH 264
               ++  +  
Sbjct: 227 AYGVVLWEIFS 237

>d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Activated CDC42 kinase 1, ACK1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 64.8 bits (157), Expect = 2e-12
 Identities = 34/227 (14%), Positives = 68/227 (29%), Gaps = 25/227 (11%)

Query: 42  TIEIGGKKYQIKGCAGQGGFAKVFKAYVNGDPED--VVALKIQKPAFPWEFYMYRQLDQR 99
           T  IG K  ++    G G F  V +   +        VA+K  KP    +        + 
Sbjct: 2   TCLIGEKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIRE 61

Query: 100 ISGRERSSFGFAHRIH--LYSDYSILVCDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTI 157
           ++           R++  + +    +V +    G+L D +  +              Y +
Sbjct: 62  VNAMHSLDHRNLIRLYGVVLTPPMKMVTELAPLGSLLDRLRKH---QGHFLLGTLSRYAV 118

Query: 158 EMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSGPWQDQGLCLVDWGRGIDL 217
           ++   +  L     IH D    NLL+                      + + D+G    L
Sbjct: 119 QVAEGMGYLESKRFIHRDLAARNLLL-----------------ATRDLVKIGDFGLMRAL 161

Query: 218 HLFPDNMEFEGDCRTSGFRCIEMQ-EKKPWKFQVDTYGLCAIVHMML 263
               D+   +   +     C     + + +    DT+     +  M 
Sbjct: 162 PQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMF 208

>d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]} Length = 318

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 9, CDK9
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 64.5 bits (156), Expect = 2e-12
 Identities = 62/317 (19%), Positives = 100/317 (31%), Gaps = 47/317 (14%)

Query: 49  KYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKI-----QKPAFPWEFYMYRQLDQRIS-- 101
           KY+     GQG F +VFKA      +  VALK      +K  FP       ++ Q +   
Sbjct: 11  KYEKLAKIGQGTFGEVFKARHRKTGQ-KVALKKVLMENEKEGFPITALREIKILQLLKHE 69

Query: 102 --------GRERSSFGFAHRIHLYSDYSILVCDYLSQGTLQDAINSYVVIGKSMEEVLCI 153
                    R ++S     +  +Y     LV D+          N    +          
Sbjct: 70  NVVNLIEICRTKASPYNRCKGSIY-----LVFDFCEHDLAGLLSN----VLVKFTLSEIK 120

Query: 154 YYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSGPWQDQGLCLVDWG- 212
                +L  L  +H   I+H D K  N+LI                  +D  L L D+G 
Sbjct: 121 RVMQMLLNGLYYIHRNKILHRDMKAANVLI-----------------TRDGVLKLADFGL 163

Query: 213 -RGIDLHLFPDNMEFEGDCRTSGFRCIE-MQEKKPWKFQVDTYGLCAIVHMMLHNSYMEI 270
            R   L        +     T  +R  E +  ++ +   +D +G   I+  M   S +  
Sbjct: 164 ARAFSLAKNSQPNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQ 223

Query: 271 EKKASPDGGLVYLPKLSFKRYWKVELWKSLFTNLLNMSSGNDKEVLQNLQKSFQDYLCSN 330
                    L+     S        +        L +  G  ++V   L+   +D    +
Sbjct: 224 GNTEQHQLALISQLCGSITPEVWPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALD 283

Query: 331 PQLLKNLKELLAKQRAS 347
             L+  L  L   QR  
Sbjct: 284 --LIDKLLVLDPAQRID 298

>d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 337

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Pkb kinase (Akt-2)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 64.4 bits (156), Expect = 3e-12
 Identities = 41/220 (18%), Positives = 78/220 (35%), Gaps = 27/220 (12%)

Query: 48  KKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKI--QKPAFPWEFYMYRQLDQRISGRER 105
             +      G+G F KV             A+KI  ++     +   +   + R+    R
Sbjct: 5   NDFDYLKLLGKGTFGKVILVREKATGR-YYAMKILRKEVIIAKDEVAHTVTESRVLQNTR 63

Query: 106 SSFGFA-HRIHLYSDYSILVCDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILE 164
             F  A        D    V +Y + G L   ++      +   E    +Y  E++  LE
Sbjct: 64  HPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSR----ERVFTEERARFYGAEIVSALE 119

Query: 165 SLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSGPWQDQGLCLVDWGRGIDLHLFPDNM 224
            LH   +++ D K +NL++                  +D  + + D+  G+      D  
Sbjct: 120 YLHSRDVVYRDIKLENLMLD-----------------KDGHIKITDF--GLCKEGISDGA 160

Query: 225 EFEGDCRTSGFRCIEMQEKKPWKFQVDTYGLCAIVHMMLH 264
             +  C T  +   E+ E   +   VD +GL  +++ M+ 
Sbjct: 161 TMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMC 200

>d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 307

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Calmodulin-dependent protein kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 63.9 bits (155), Expect = 4e-12
 Identities = 45/223 (20%), Positives = 79/223 (35%), Gaps = 37/223 (16%)

Query: 49  KYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFPWEFYMYRQLDQRISGRERSSF 108
            Y  +   G G F++V  A      + +VA+K              +  +     E +  
Sbjct: 10  IYDFRDVLGTGAFSEVILAEDKRTQK-LVAIKCIAKKA-------LEGKEGSMENEIAVL 61

Query: 109 G-FAHR--IHLY-----SDYSILVCDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEML 160
               H   + L        +  L+   +S G L D I           E        ++L
Sbjct: 62  HKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEK----GFYTERDASRLIFQVL 117

Query: 161 CILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSGPWQDQGLCLVDWGRGIDLHLF 220
             ++ LHD+GI+H D KP+NLL     ++  ++         D GL            + 
Sbjct: 118 DAVKYLHDLGIVHRDLKPENLLYYSLDEDSKIMIS-------DFGLS----------KME 160

Query: 221 PDNMEFEGDCRTSGFRCIEMQEKKPWKFQVDTYGLCAIVHMML 263
                    C T G+   E+  +KP+   VD + +  I +++L
Sbjct: 161 DPGSVLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILL 203

>d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: ephb2 receptor tyrosine kinase
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 63.6 bits (154), Expect = 4e-12
 Identities = 33/247 (13%), Positives = 79/247 (31%), Gaps = 26/247 (10%)

Query: 23  KVYSGKVALSSLNNSSRNKTIEIGGKKYQIKGCAGQGGFAKVFKAY--VNGDPEDVVALK 80
           K++         N + R    EI     +I+   G G F +V   +  + G  E  VA+K
Sbjct: 1   KIFIDPFTFEDPNEAVREFAKEIDISCVKIEQVIGAGEFGEVCSGHLKLPGKREIFVAIK 60

Query: 81  IQKPAFPWEFYMYRQLDQRISGRERSSFGFA-HRIHLYSDYSILVCDYLSQGTLQDAINS 139
             K  +  +       +  I G+           +   S   +++ +++  G+L   +  
Sbjct: 61  TLKSGYTEKQRRDFLSEASIMGQFDHPNVIHLEGVVTKSTPVMIITEFMENGSLDSFLRQ 120

Query: 140 YVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSG 199
                     +  +     +   ++ L D+  +H D    N+L          ++ +   
Sbjct: 121 ND---GQFTVIQLVGMLRGIAAGMKYLADMNYVHRDLAARNIL----------VNSNLV- 166

Query: 200 PWQDQGLCLVDWGRGIDLHLFPDNMEFE---GDCRTSGFRCIEMQEKKPWKFQVDTYGLC 256
                   + D+G    L     +  +    G      +   E  + + +    D +   
Sbjct: 167 ------CKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPEAIQYRKFTSASDVWSYG 220

Query: 257 AIVHMML 263
            ++  ++
Sbjct: 221 IVMWEVM 227

>d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]} Length = 345

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase Erk2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 63.3 bits (153), Expect = 8e-12
 Identities = 39/224 (17%), Positives = 74/224 (33%), Gaps = 30/224 (13%)

Query: 47  GKKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKI----QKPAFPWEFYMYRQLDQRISG 102
           G +Y      G+G +  V  AY N +    VA+K     +   +        ++  R   
Sbjct: 7   GPRYTNLSYIGEGAYGMVCSAYDNVNKV-RVAIKKISPFEHQTYCQRTLREIKILLRFRH 65

Query: 103 RERSSF-GFAHRIHLYSDYSILVCDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLC 161
                         +     + +  +L    L   + +     + +      Y+  ++L 
Sbjct: 66  ENIIGINDIIRAPTIEQMKDVYLVTHLMGADLYKLLKT-----QHLSNDHICYFLYQILR 120

Query: 162 ILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSGPWQDQGLCLVDWGRGIDLHLFP 221
            L+ +H   ++H D KP NLL+                      L + D+G         
Sbjct: 121 GLKYIHSANVLHRDLKPSNLLL-----------------NTTCDLKICDFGLARVADPDH 163

Query: 222 DNMEFEGD-CRTSGFRCIE-MQEKKPWKFQVDTYGLCAIVHMML 263
           D+  F  +   T  +R  E M   K +   +D + +  I+  ML
Sbjct: 164 DHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEML 207

>d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Glycogen synthase kinase-3 beta (Gsk3b)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 62.9 bits (152), Expect = 9e-12
 Identities = 42/214 (19%), Positives = 71/214 (33%), Gaps = 32/214 (14%)

Query: 57  GQGGFAKVFKAYVNGDPEDVVALKI---QKPAFPWEFYMYRQLDQ----RISGRERSSFG 109
           G G F  V++A +    E +VA+K     K     E  + R+LD     R+     SS  
Sbjct: 29  GNGSFGVVYQAKLCDSGE-LVAIKKVLQDKRFKNRELQIMRKLDHCNIVRLRYFFYSSGE 87

Query: 110 FAHRIHLYSDYSILVCDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDV 169
               ++L      LV DY+ +   +     Y    +++  +    Y  ++   L  +H  
Sbjct: 88  KKDEVYLN-----LVLDYVPETVYRV-ARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSF 141

Query: 170 GIIHGDFKPDNLLIRYARDELTVLDHDRSGPWQDQGLCLVDWGRGIDLHLFPDNMEFEGD 229
           GI H D KP NLL+      L + D                   G    L          
Sbjct: 142 GICHRDIKPQNLLLDPDTAVLKLCDF------------------GSAKQLVRGEPNVSYI 183

Query: 230 CRTSGFRCIEMQEKKPWKFQVDTYGLCAIVHMML 263
           C         +     +   +D +    ++  +L
Sbjct: 184 CSRYYRAPELIFGATDYTSSIDVWSAGCVLAELL 217

>d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]} Length = 355

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-jun N-terminal kinase (jnk3s)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 62.7 bits (151), Expect = 1e-11
 Identities = 47/237 (19%), Positives = 78/237 (32%), Gaps = 44/237 (18%)

Query: 42  TIEIGG------KKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPA---------F 86
           ++E+G       K+YQ     G G    V  AY        VA+K               
Sbjct: 5   SVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDR-NVAIKKLSRPFQNQTHAKRA 63

Query: 87  PWEFYMYRQLDQRISGRERSSFGFAHRIHLYSDYSILVCDYLSQGTLQDAINSYVVIGKS 146
             E  + + ++ +      + F     +  + D  + V + +     Q       VI   
Sbjct: 64  YRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYL-VMELMDANLCQ-------VIQME 115

Query: 147 MEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSGPWQDQGL 206
           ++     Y   +MLC ++ LH  GIIH D KP N           V+  D +    D GL
Sbjct: 116 LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSN----------IVVKSDCTLKILDFGL 165

Query: 207 CLVDWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQEKKPWKFQVDTYGLCAIVHMML 263
                           +        T  +R  E+     +K  VD + +  I+  M+
Sbjct: 166 A----------RTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMV 212

>d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 309

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine protein kinase TAO2
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 62.3 bits (151), Expect = 1e-11
 Identities = 39/221 (17%), Positives = 67/221 (30%), Gaps = 32/221 (14%)

Query: 48  KKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFPWEFYMYRQLDQRISGRERSS 107
           K +      G G F  V+ A    + E VVA+K    +       ++ + + +  R    
Sbjct: 15  KLFSDLREIGHGSFGAVYFARDVRNSE-VVAIKKMSYSGKQSNEKWQDIIKEV--RFLQK 71

Query: 108 FGFAHRIHLY-----SDYSILVCDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCI 162
               + I           + LV +Y                 K ++EV     T   L  
Sbjct: 72  LRHPNTIQYRGCYLREHTAWLVMEYCLGSASDLLEVH----KKPLQEVEIAAVTHGALQG 127

Query: 163 LESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSGPWQDQGLCLVDWGRGIDLHLFPD 222
           L  LH   +IH D K  N+L+                  +   + L D+G      +   
Sbjct: 128 LAYLHSHNMIHRDVKAGNILLS-----------------EPGLVKLGDFGSA---SIMAP 167

Query: 223 NMEFEGDCRTSGFRCIEMQEKKPWKFQVDTYGLCAIVHMML 263
              F G         I   ++  +  +VD + L      + 
Sbjct: 168 ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELA 208

>d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 270

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase wnk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 61.9 bits (150), Expect = 1e-11
 Identities = 28/159 (17%), Positives = 57/159 (35%), Gaps = 11/159 (6%)

Query: 43  IEIGGKKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFPWEFYMYRQLDQRISG 102
           +   G+  +     G+G F  V+K        +V   ++Q            + +  +  
Sbjct: 4   MSNDGRFLKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLK 63

Query: 103 RERSS-----FGFAHRIHLYSDYSILVCDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTI 157
             +       +             +LV + ++ GTL+  +  +    K M+  +   +  
Sbjct: 64  GLQHPNIVRFYDSWESTVKGKKCIVLVTELMTSGTLKTYLKRF----KVMKIKVLRSWCR 119

Query: 158 EMLCILESLHDVG--IIHGDFKPDNLLIRYARDELTVLD 194
           ++L  L+ LH     IIH D K DN+ I      + + D
Sbjct: 120 QILKGLQFLHTRTPPIIHRDLKCDNIFITGPTGSVKIGD 158

>d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fibroblast growth factor receptor 1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 62.2 bits (150), Expect = 1e-11
 Identities = 32/240 (13%), Positives = 74/240 (30%), Gaps = 37/240 (15%)

Query: 44  EIGGKKYQIKGCAGQGGFAKVFKAYVNGDPED------VVALKIQKPAFPWEFYMYRQLD 97
           E+   +  +    G+G F +V  A   G  +D       VA+K+ K     +       +
Sbjct: 9   ELPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISE 68

Query: 98  QRISGRERSSFGFAHRIHLYSD--YSILVCDYLSQGTLQDAI------------NSYVVI 143
             +           + +   +      ++ +Y S+G L++ +            N     
Sbjct: 69  MEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNP 128

Query: 144 GKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSGPWQD 203
            + +     +    ++   +E L     IH D    N+L+                  +D
Sbjct: 129 EEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLV-----------------TED 171

Query: 204 QGLCLVDWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQEKKPWKFQVDTYGLCAIVHMML 263
             + + D+G   D+H      +         +   E    + +  Q D +    ++  + 
Sbjct: 172 NVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIF 231

>d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase ZAP-70
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 61.7 bits (149), Expect = 2e-11
 Identities = 27/214 (12%), Positives = 55/214 (25%), Gaps = 32/214 (14%)

Query: 57  GQGGFAKVFKA-YVNGDPEDVVALKIQKPAFPWEFYMYRQLDQRISGRERSS-----FGF 110
           G G F  V +  Y     +  VA+K+ K             + +I  +  +       G 
Sbjct: 18  GCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGV 77

Query: 111 AHRIHLYSDYSILVCDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVG 170
                L      LV +    G L   +       + +          ++   ++ L +  
Sbjct: 78  CQAEALM-----LVMEMAGGGPLHKFLVGK---REEIPVSNVAELLHQVSMGMKYLEEKN 129

Query: 171 IIHGDFKPDNLLIRYARDELTVLDHDRSGPWQDQGLCLVDWGRGIDLHLFPDNMEFEGD- 229
            +H D    N+L+                        + D+G    L             
Sbjct: 130 FVHRDLAARNVLL-----------------VNRHYAKISDFGLSKALGADDSYYTARSAG 172

Query: 230 CRTSGFRCIEMQEKKPWKFQVDTYGLCAIVHMML 263
                +   E    + +  + D +     +   L
Sbjct: 173 KWPLKWYAPECINFRKFSSRSDVWSYGVTMWEAL 206

>d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]} Length = 303

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Type I TGF-beta receptor R4
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 61.4 bits (148), Expect = 2e-11
 Identities = 28/146 (19%), Positives = 58/146 (39%), Gaps = 15/146 (10%)

Query: 47  GKKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFPWEFYMYRQLDQRISGRER- 105
            +   ++   G+G F +V++    G   + VA+KI        ++   ++ Q +  R   
Sbjct: 2   ARTIVLQESIGKGRFGEVWRGKWRG---EEVAVKIFSSREERSWFREAEIYQTVMLRHEN 58

Query: 106 --SSFGFAHRIHLYSDYSILVCDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTI------ 157
                   ++ +       LV DY   G+L D +N Y     ++E ++ +  +       
Sbjct: 59  ILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRY---TVTVEGMIKLALSTASGLAH 115

Query: 158 EMLCILESLHDVGIIHGDFKPDNLLI 183
             + I+ +     I H D K  N+L+
Sbjct: 116 LHMEIVGTQGKPAIAHRDLKSKNILV 141

>d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase SYK
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 60.9 bits (147), Expect = 3e-11
 Identities = 30/217 (13%), Positives = 59/217 (27%), Gaps = 38/217 (17%)

Query: 57  GQGGFAKVFKAYV-NGDPEDVVALKI-----QKPAFPWEFYMYRQLDQRISGRERSSFGF 110
           G G F  V K Y         VA+KI       PA   E      + Q++          
Sbjct: 16  GSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNP------- 68

Query: 111 AHRIHLY----SDYSILVCDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESL 166
            + + +     ++  +LV +    G L   +       + +++   I    ++   ++ L
Sbjct: 69  -YIVRMIGICEAESWMLVMEMAELGPLNKYLQQ----NRHVKDKNIIELVHQVSMGMKYL 123

Query: 167 HDVGIIHGDFKPDNLLIRYARDELTVLDHDRSGPWQDQGLCLVDWGRGIDLHLFPDNMEF 226
            +   +H D    N+L          L         D GL                    
Sbjct: 124 EESNFVHRDLAARNVL----------LVTQHYAKISDFGLSKALRAD------ENYYKAQ 167

Query: 227 EGDCRTSGFRCIEMQEKKPWKFQVDTYGLCAIVHMML 263
                   +   E      +  + D +    ++    
Sbjct: 168 THGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAF 204

>d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Focal adhesion kinase 1 (fak)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 60.6 bits (146), Expect = 4e-11
 Identities = 32/227 (14%), Positives = 68/227 (29%), Gaps = 33/227 (14%)

Query: 44  EIGGKKYQIKGCAGQGGFAKVFKAY--VNGDPEDVVALKIQKPAFPWEFYMYRQLDQRIS 101
           EI  ++ ++  C G+G F  V +       +P   VA+K  K             +    
Sbjct: 3   EIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTM 62

Query: 102 GRERSS-----FGFAHRIHLYSDYSILVCDYLSQGTLQDAINSYVVIGKSMEEVLCIYYT 156
            +          G      ++     ++ +  + G L+  +        S++    I Y 
Sbjct: 63  RQFDHPHIVKLIGVITENPVW-----IIMELCTLGELRSFLQVRK---YSLDLASLILYA 114

Query: 157 IEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSGPWQDQGLCLVDWGRGID 216
            ++   L  L     +H D    N+L+  + D + + D   S   +D        G+   
Sbjct: 115 YQLSTALAYLESKRFVHRDIAARNVLVS-SNDCVKLGDFGLSRYMEDSTYYKASKGKL-- 171

Query: 217 LHLFPDNMEFEGDCRTSGFRCIEMQEKKPWKFQVDTYGLCAIVHMML 263
                             +   E    + +    D +     +  +L
Sbjct: 172 ---------------PIKWMAPESINFRRFTSASDVWMFGVCMWEIL 203

>d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 325

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fl cytokine receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 60.9 bits (147), Expect = 4e-11
 Identities = 32/250 (12%), Positives = 71/250 (28%), Gaps = 52/250 (20%)

Query: 44  EIGGKKYQIKGCAGQGGFAKVFKAYVNGDPED----VVALKIQKPAFPWEFYMYRQLDQR 99
           E   +  +     G G F KV  A   G  +      VA+K+ K             + +
Sbjct: 33  EFPRENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELK 92

Query: 100 ISGRERSSFGFAHR--IHLY-----SDYSILVCDYLSQGTLQDAINS------------- 139
           +  +  S     H   ++L      S    L+ +Y   G L + + S             
Sbjct: 93  MMTQLGS-----HENIVNLLGACTLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYE 147

Query: 140 ------YVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVL 193
                        +     + +  ++   +E L     +H D    N+L+          
Sbjct: 148 NQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFKSCVHRDLAARNVLVT--------- 198

Query: 194 DHDRSGPWQDQGLCLVDWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQEKKPWKFQVDTY 253
                     + + + D+G   D+    + +          +   E   +  +  + D +
Sbjct: 199 --------HGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVW 250

Query: 254 GLCAIVHMML 263
               ++  + 
Sbjct: 251 SYGILLWEIF 260

>d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Ribosomal protein S6 kinase alpha 5, Msk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 60.6 bits (146), Expect = 5e-11
 Identities = 42/230 (18%), Positives = 80/230 (34%), Gaps = 33/230 (14%)

Query: 45  IGGKKYQIKGCAGQGGFAKVFKAY--VNGDPEDVVALKI-------QKPAFPWEFYMYRQ 95
           +G + +++    G G + KVF        D   + A+K+       QK          RQ
Sbjct: 21  VGIENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQ 80

Query: 96  LDQRISGRERSSFGFAHRIHLYSDYSILVCDYLSQGTLQDAINSYVVIGKSMEEVLCIYY 155
           + + I  R+       H          L+ DY++ G L   ++      +   E     Y
Sbjct: 81  VLEHI--RQSPFLVTLHYAFQTETKLHLILDYINGGELFTHLSQR----ERFTEHEVQIY 134

Query: 156 TIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSGPWQDQGLCLVDWGRGI 215
             E++  LE LH +GII+ D K +N+L+                   +  + L D+G   
Sbjct: 135 VGEIVLALEHLHKLGIIYRDIKLENILLD-----------------SNGHVVLTDFGLSK 177

Query: 216 DLHLFPDNMEFEGDCRTSGFRCIEMQ-EKKPWKFQVDTYGLCAIVHMMLH 264
           +         ++            ++         VD + L  +++ +L 
Sbjct: 178 EFVADETERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLT 227

>d1zara2 d.144.1.9 (A:91-281) Rio2 serine protein kinase C-terminal domain {Archaeoglobus fulgidus [TaxId: 2234]} Length = 191

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: RIO1-like kinases
domain: Rio2 serine protein kinase C-terminal domain
species: Archaeoglobus fulgidus [TaxId: 2234]

 Score = 58.6 bits (141), Expect = 7e-11
 Identities = 30/198 (15%), Positives = 56/198 (28%), Gaps = 28/198 (14%)

Query: 57  GQGGFAKVFKAYVNGDPEDVVALKIQKPA---FPWEFYMYRQLDQRISGRERSSFGFAHR 113
           G+G  + VF  Y     E    +K  K     F          D   S     S     R
Sbjct: 9   GEGKESAVFNCYSEKFGE--CVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFR 66

Query: 114 IHLYSDYSILVCDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIH 173
                    +   Y  +G               +           +L  +   +  GI+H
Sbjct: 67  ALQKLQGLAVPKVYAWEGNAVLMELIDAKELYRVRVENPDEVLDMILEEVAKFYHRGIVH 126

Query: 174 GDFKPDNLLIRYARDELTVLDHDRSGPWQDQGLCLVDWGRGIDLHLFPDNMEFEGDCRTS 233
           GD    N+L+                   ++G+ ++D+ + +++         E D    
Sbjct: 127 GDLSQYNVLVS------------------EEGIWIIDFPQSVEVGEEGWREILERDV--- 165

Query: 234 GFRCIEMQEKKPWKFQVD 251
             R I     + ++ + D
Sbjct: 166 --RNIITYFSRTYRTEKD 181

>d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]} Length = 348

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 60.3 bits (145), Expect = 8e-11
 Identities = 58/322 (18%), Positives = 97/322 (30%), Gaps = 50/322 (15%)

Query: 40  NKTIEIGGKKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKI-----QKPAFPWEFYMYR 94
           NKTI    ++YQ     G G +  V  A+        VA+K      Q        Y   
Sbjct: 10  NKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGL-RVAVKKLSRPFQSIIHAKRTYREL 68

Query: 95  QLDQRISGRERSSF--GFAHRIHLYSDYSILVCDYLSQGTLQDAINSYVVIGKSMEEVLC 152
           +L + +           F     L     + +  +L    L + +       + + +   
Sbjct: 69  RLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC-----QKLTDDHV 123

Query: 153 IYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSGPWQDQGLCLVDWG 212
            +   ++L  L+ +H   IIH D KP NL +          + D      D GL      
Sbjct: 124 QFLIYQILRGLKYIHSADIIHRDLKPSNLAV----------NEDCELKILDFGLA----- 168

Query: 213 RGIDLHLFPDNMEFEGDCRTSGFRCIE-MQEKKPWKFQVDTYGLCAIVHMMLH------- 264
                     + E  G   T  +R  E M     +   VD + +  I+  +L        
Sbjct: 169 -------RHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPG 221

Query: 265 NSYMEIEKKASPDGGLVYLPKLSFKRYWKVELWKSLFTNLLNMSSGNDKEVLQNLQKSFQ 324
             +++  K       LV  P     +    E  ++   +L  M   N   V         
Sbjct: 222 TDHIDQLKLIL---RLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAV 278

Query: 325 DY----LCSNPQLLKNLKELLA 342
           D     L  +        + LA
Sbjct: 279 DLLEKMLVLDSDKRITAAQALA 300

>d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 311

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-KIT receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 59.8 bits (144), Expect = 9e-11
 Identities = 33/259 (12%), Positives = 72/259 (27%), Gaps = 63/259 (24%)

Query: 38  SRNKTIEIGGKKYQIKGCAGQGGFAKVFKAYVNGDPED----VVALKIQKP--------A 85
             +   E    +       G G F KV +A   G  +      VA+K+ KP        A
Sbjct: 13  PYDHKWEFPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREA 72

Query: 86  FPWEFYMYRQLDQRISGRERSSFGFAHR--IHLY-----SDYSILVCDYLSQGTLQDAIN 138
              E  +   L               H   ++L         ++++ +Y   G L + + 
Sbjct: 73  LMSELKVLSYLGN-------------HMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLR 119

Query: 139 SY--------------VVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIR 184
                                +++    + ++ ++   +  L     IH D    N+L+ 
Sbjct: 120 RKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNILL- 178

Query: 185 YARDELTVLDHDRSGPWQDQGLCLVDWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQEKK 244
                              +   + D+G   D+    + +          +   E     
Sbjct: 179 ----------------THGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNC 222

Query: 245 PWKFQVDTYGLCAIVHMML 263
            + F+ D +     +  + 
Sbjct: 223 VYTFESDVWSYGIFLWELF 241

>d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Death-associated protein kinase, Dap
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 59.4 bits (143), Expect = 1e-10
 Identities = 43/225 (19%), Positives = 78/225 (34%), Gaps = 31/225 (13%)

Query: 48  KKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFPWEFYMYRQLDQRISGRER-- 105
             Y      G G FA V K           A K  K          R + +    RE   
Sbjct: 10  DYYDTGEELGSGQFAVVKKCREKSTGL-QYAAKFIKKRRTKS--SRRGVSREDIEREVSI 66

Query: 106 -SSFGFAHRIHLY-----SDYSILVCDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEM 159
                  + I L+         IL+ + ++ G L D +       +S+ E     +  ++
Sbjct: 67  LKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAE----KESLTEEEATEFLKQI 122

Query: 160 LCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSGPWQDQGLCLVDWGRGIDLHL 219
           L  +  LH + I H D KP+N+++                  + + + ++D+G     H 
Sbjct: 123 LNGVYYLHSLQIAHFDLKPENIML------------LDRNVPKPR-IKIIDFGLA---HK 166

Query: 220 FPDNMEFEGDCRTSGFRCIEMQEKKPWKFQVDTYGLCAIVHMMLH 264
                EF+    T  F   E+   +P   + D + +  I +++L 
Sbjct: 167 IDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLS 211

>d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]} Length = 292

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK5
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 58.8 bits (141), Expect = 2e-10
 Identities = 36/220 (16%), Positives = 69/220 (31%), Gaps = 27/220 (12%)

Query: 48  KKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFPWEFYMYRQLDQRISGRERSS 107
           +KY+     G+G +  VFKA      E +VALK  +     E      L +    +E   
Sbjct: 2   QKYEKLEKIGEGTYGTVFKAKNRETHE-IVALKRVRLDDDDEGVPSSALREICLLKELKH 60

Query: 108 FGFAHRIHLYSD--YSILVCDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILES 165
                   +        LV ++  Q   +     +      ++  +   +  ++L  L  
Sbjct: 61  KNIVRLHDVLHSDKKLTLVFEFCDQDLKKY----FDSCNGDLDPEIVKSFLFQLLKGLGF 116

Query: 166 LHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSGPWQDQGLCLVDWGRGIDLHLFPDNME 225
            H   ++H D KP NLLI          + +      + GL                   
Sbjct: 117 CHSRNVLHRDLKPQNLLI----------NRNGELKLANFGLARA---------FGIPVRC 157

Query: 226 FEGDCRTSGFRCIEMQEKKPWK-FQVDTYGLCAIVHMMLH 264
           +  +  T  +R  ++          +D +    I   + +
Sbjct: 158 YSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELAN 197

>d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 362

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Sky1p
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 58.9 bits (141), Expect = 2e-10
 Identities = 41/314 (13%), Positives = 87/314 (27%), Gaps = 36/314 (11%)

Query: 49  KYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKI------QKPAFPWEFYMYRQLDQRISG 102
           +Y +    G G F+ V+ A    +    VA+KI         A   E  + ++++   + 
Sbjct: 14  RYILVRKLGWGHFSTVWLAKDMVNNT-HVAMKIVRGDKVYTEAAEDEIKLLQRVNDADNT 72

Query: 103 RERSSFG------FAHRIHLYSDYSILVCDYLSQGTLQDAINSYVVIGKSMEEVLCIYYT 156
           +E S           H  H   +   +V  +   G    A+             +     
Sbjct: 73  KEDSMGANHILKLLDHFNHKGPNGVHVVMVFEVLGENLLALIKKYEHRGIPLIYVKQISK 132

Query: 157 IEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSGPWQDQGLCLVDWGRGID 216
             +L +       GIIH D KP+N+L+                   +  + +     G  
Sbjct: 133 QLLLGLDYMHRRCGIIHTDIKPENVLM-------------EIVDSPENLIQIKIADLGNA 179

Query: 217 LHLFPDNMEFEGDCRTSGFRCIEMQEKKPWKFQVDTYGLCAIVHMMLHNSYMEIEKKASP 276
                             +R  E+    PW    D +    ++  ++   ++    +   
Sbjct: 180 CWYDEHYTNSIQTR---EYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEPDEGHS 236

Query: 277 DGGLVYLPKLSFK-------RYWKVELWKSLFTNLLNMSSGNDKEVLQNLQKSFQDYLCS 329
                       +          +   +   F N   +     K     L+    +    
Sbjct: 237 YTKDDDHIAQIIELLGELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKF 296

Query: 330 NPQLLKNLKELLAK 343
           +    K + + L+ 
Sbjct: 297 SKDEAKEISDFLSP 310

>d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 309

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tie2 kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 58.7 bits (141), Expect = 2e-10
 Identities = 29/230 (12%), Positives = 66/230 (28%), Gaps = 35/230 (15%)

Query: 50  YQIKGCAGQGGFAKVFKAYVNGDPEDV-VALKIQKPAFPWEFYMYRQLDQRISGRERSSF 108
            + +   G+G F +V KA +  D   +  A+K  K     + +     +  +  +     
Sbjct: 12  IKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHP 71

Query: 109 GFA--HRIHLYSDYSILVCDYLSQGTLQDAINSYVVI------------GKSMEEVLCIY 154
                     +  Y  L  +Y   G L D +    V+              ++     ++
Sbjct: 72  NIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLH 131

Query: 155 YTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSGPWQDQGLCLVDWGRG 214
           +  ++   ++ L     IH D    N+L          +  +      D GL        
Sbjct: 132 FAADVARGMDYLSQKQFIHRDLAARNIL----------VGENYVAKIADFGLS------- 174

Query: 215 IDLHLFPDNMEFEGDCRTSGFRCIEMQEKKPWKFQVDTYGLCAIVHMMLH 264
                    ++         +  IE      +    D +    ++  ++ 
Sbjct: 175 ---RGQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVS 221

>d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]} Length = 258

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Bruton's tyrosine kinase (Btk)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 57.4 bits (138), Expect = 4e-10
 Identities = 29/230 (12%), Positives = 62/230 (26%), Gaps = 46/230 (20%)

Query: 45  IGGKKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKI------QKPAFPWEFYMYRQLDQ 98
           I  K        G G F  V      G  +  VA+K+       +  F  E  +   L  
Sbjct: 1   IDPKDLTFLKELGTGQFGVVKYGKWRG--QYDVAIKMIKEGSMSEDEFIEEAKVMMNLSH 58

Query: 99  RISGRERSSFGFAHRIHLY-----SDYSILVCDYLSQGTLQDAINSYVVIGKSMEEVLCI 153
                          + LY          ++ +Y++ G L + +          +    +
Sbjct: 59  E------------KLVQLYGVCTKQRPIFIITEYMANGCLLNYLREM---RHRFQTQQLL 103

Query: 154 YYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSGPWQDQGLCLVDWGR 213
               ++   +E L     +H D    N L+                      + + D+G 
Sbjct: 104 EMCKDVCEAMEYLESKQFLHRDLAARNCLVN-----------------DQGVVKVSDFGL 146

Query: 214 GIDLHLFPDNMEFEGDCRTSGFRCIEMQEKKPWKFQVDTYGLCAIVHMML 263
              +    +     G      +   E+     +  + D +    ++  + 
Sbjct: 147 SRYVL-DDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIY 195

>d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]} Length = 311

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Hepatocyte growth factor receptor, c-MET
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 57.5 bits (138), Expect = 5e-10
 Identities = 30/243 (12%), Positives = 72/243 (29%), Gaps = 30/243 (12%)

Query: 31  LSSLN----NSSRNKTIEIGGKKYQIKGCAGQGGFAKVFKAYV--NGDPEDVVALKIQKP 84
           LS+LN     + ++  I             G+G F  V+   +  N   +   A+K    
Sbjct: 6   LSALNPELVQAVQHVVIGPSSLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNR 65

Query: 85  AFPWEFYMYRQLDQRISGRERSSF--GFAHRIHLYSDYSILVCDYLSQGTLQDAINSYVV 142
                       +  I                       ++V  Y+  G L++ I +   
Sbjct: 66  ITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNE-- 123

Query: 143 IGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSGPWQ 202
              +      I + +++   ++ L     +H D    N ++                  +
Sbjct: 124 -THNPTVKDLIGFGLQVAKGMKFLASKKFVHRDLAARNCMLD-----------------E 165

Query: 203 DQGLCLVDWG--RGIDLHLFPDNMEFEGDCRTSGFRCIEMQEKKPWKFQVDTYGLCAIVH 260
              + + D+G  R +    F       G      +  +E  + + +  + D +    ++ 
Sbjct: 166 KFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLW 225

Query: 261 MML 263
            ++
Sbjct: 226 ELM 228

>d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 317

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: EGF receptor tyrosine kinase, Erbb-1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 57.5 bits (138), Expect = 6e-10
 Identities = 31/217 (14%), Positives = 68/217 (31%), Gaps = 23/217 (10%)

Query: 50  YQIKGCAGQGGFAKVFKAYVNGDPEDV---VALKIQKPAFPWEFYMYRQLDQRISGRERS 106
           ++     G G F  V+K     + E V   VA+K  + A   +       +  +     +
Sbjct: 11  FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 70

Query: 107 SFGFAHRIHLYSDYSILVCDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESL 166
                      +    L+   +  G L D +  +     ++     + + +++   +  L
Sbjct: 71  PHVCRLLGICLTSTVQLITQLMPFGCLLDYVREH---KDNIGSQYLLNWCVQIAKGMNYL 127

Query: 167 HDVGIIHGDFKPDNLLIRYARDELTVLDHDRSGPWQDQGLCLVDWGRGIDLHLFPDNMEF 226
            D  ++H D    N+L+                    Q + + D+G    L         
Sbjct: 128 EDRRLVHRDLAARNVLV-----------------KTPQHVKITDFGLAKLLGAEEKEYHA 170

Query: 227 EGDCRTSGFRCIEMQEKKPWKFQVDTYGLCAIVHMML 263
           EG      +  +E    + +  Q D +     V  ++
Sbjct: 171 EGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELM 207

>d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 283

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: epha2 receptor tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 57.2 bits (137), Expect = 6e-10
 Identities = 33/234 (14%), Positives = 70/234 (29%), Gaps = 39/234 (16%)

Query: 42  TIEIGGKKYQIKGCAGQGGFAKVFKAYV---NGDPEDVVALKIQKPA--------FPWEF 90
           T EI       +   G G F +V+K  +   +G  E  VA+K  K          F  E 
Sbjct: 1   TTEIHPSCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEA 60

Query: 91  YMYRQLDQRISGRERSSFGFAHRIHLYSDYSILVCDYLSQGTLQDAINSYVVIGKSMEEV 150
            +  Q       R          +       +++ +Y+  G L   +            +
Sbjct: 61  GIMGQFSHHNIIR-------LEGVISKYKPMMIITEYMENGALDKFLREK---DGEFSVL 110

Query: 151 LCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSGPWQDQGLCLVD 210
             +     +   ++ L ++  +H D    N+L          ++ +           + D
Sbjct: 111 QLVGMLRGIAAGMKYLANMNYVHRDLAARNIL----------VNSNLV-------CKVSD 153

Query: 211 WGRGIDLHLFPDN-MEFEGDCRTSGFRCIEMQEKKPWKFQVDTYGLCAIVHMML 263
           +G    L   P+      G      +   E    + +    D +    ++  ++
Sbjct: 154 FGLSRVLEDDPEATYTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVM 207

>d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]} Length = 263

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase Itk/Tsk
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 56.6 bits (136), Expect = 6e-10
 Identities = 32/230 (13%), Positives = 66/230 (28%), Gaps = 46/230 (20%)

Query: 45  IGGKKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKI------QKPAFPWEFYMYRQLDQ 98
           I   +       G G F  V   Y      D VA+K        +  F  E  +  +L  
Sbjct: 2   IDPSELTFVQEIGSGQFGLVHLGYWLNK--DKVAIKTIREGAMSEEDFIEEAEVMMKLSH 59

Query: 99  RISGRERSSFGFAHRIHLY-----SDYSILVCDYLSQGTLQDAINSYVVIGKSMEEVLCI 153
                          + LY          LV +++  G L D + +   +         +
Sbjct: 60  P------------KLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGL---FAAETLL 104

Query: 154 YYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSGPWQDQGLCLVDWGR 213
              +++   +  L +  +IH D    N L+                  ++Q + + D+G 
Sbjct: 105 GMCLDVCEGMAYLEEACVIHRDLAARNCLVG-----------------ENQVIKVSDFGM 147

Query: 214 GIDLHLFPDNMEFEGDCRTSGFRCIEMQEKKPWKFQVDTYGLCAIVHMML 263
              +          G      +   E+     +  + D +    ++  + 
Sbjct: 148 TRFVL-DDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVF 196

>d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 308

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Insulin-like growth factor 1 receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 57.2 bits (137), Expect = 7e-10
 Identities = 29/231 (12%), Positives = 71/231 (30%), Gaps = 28/231 (12%)

Query: 44  EIGGKKYQIKGCAGQGGFAKVFKAYVNG----DPEDVVALKIQKPAFPWEFYMYRQLDQR 99
           E+  +K  +    GQG F  V++    G    +PE  VA+K    A      +    +  
Sbjct: 16  EVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEAS 75

Query: 100 ISGRERSSF-GFAHRIHLYSDYSILVCDYLSQGTLQDAINSY------VVIGKSMEEVLC 152
           +              +      ++++ + +++G L+  + S         +         
Sbjct: 76  VMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKM 135

Query: 153 IYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSGPWQDQGLCLVDWG 212
           I    E+   +  L+    +H D    N ++                  +D  + + D+G
Sbjct: 136 IQMAGEIADGMAYLNANKFVHRDLAARNCMV-----------------AEDFTVKIGDFG 178

Query: 213 RGIDLHLFPDNMEFEGDCRTSGFRCIEMQEKKPWKFQVDTYGLCAIVHMML 263
              D++      +         +   E  +   +    D +    ++  + 
Sbjct: 179 MTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIA 229

>d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]} Length = 298

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 56.8 bits (136), Expect = 8e-10
 Identities = 44/221 (19%), Positives = 73/221 (33%), Gaps = 32/221 (14%)

Query: 49  KYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKI-----QKPAFPWEFYMYRQLDQRISGR 103
            +Q     G+G +  V+KA      E VVALK      +    P        L + ++  
Sbjct: 3   NFQKVEKIGEGTYGVVYKARNKLTGE-VVALKKIRLDTETEGVPSTAIREISLLKELNHP 61

Query: 104 ERSSFGFAHRIHLYSDYSILVCDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCIL 163
                     +    +   LV ++L Q   +    S       +   L   Y  ++L  L
Sbjct: 62  NIVKL---LDVIHTENKLYLVFEFLHQDLKKFMDASA---LTGIPLPLIKSYLFQLLQGL 115

Query: 164 ESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSGPWQDQGLCLVDWGRGIDLHLFPDN 223
              H   ++H D KP NLLI                   +  + L D+  G+        
Sbjct: 116 AFCHSHRVLHRDLKPQNLLI-----------------NTEGAIKLADF--GLARAFGVPV 156

Query: 224 MEFEGDCRTSGFRCIEMQ-EKKPWKFQVDTYGLCAIVHMML 263
             +  +  T  +R  E+    K +   VD + L  I   M+
Sbjct: 157 RTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMV 197

>d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]} Length = 286

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: (Plasmodium falciparum) [TaxId: 5833]

 Score = 56.4 bits (135), Expect = 1e-09
 Identities = 39/219 (17%), Positives = 78/219 (35%), Gaps = 28/219 (12%)

Query: 49  KYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFPWEFYMYRQLDQRISGRERSSF 108
           KY      G+G +  V+KA  N    +  ALK  +     E      + +    +E    
Sbjct: 3   KYHGLEKIGEGTYGVVYKAQNNYG--ETFALKKIRLEKEDEGIPSTTIREISILKELKHS 60

Query: 109 GFA--HRIHLYSDYSILVCDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESL 166
                + +       +LV ++L Q   +            +E V    + +++L  +   
Sbjct: 61  NIVKLYDVIHTKKRLVLVFEHLDQDLKKLLDVC----EGGLESVTAKSFLLQLLNGIAYC 116

Query: 167 HDVGIIHGDFKPDNLLIRYARDELTVLDHDRSGPWQDQGLCLVDWGRGIDLHLFPDNMEF 226
           HD  ++H D KP NLLI                  ++  L + D+  G+         ++
Sbjct: 117 HDRRVLHRDLKPQNLLIN-----------------REGELKIADF--GLARAFGIPVRKY 157

Query: 227 EGDCRTSGFRCIE-MQEKKPWKFQVDTYGLCAIVHMMLH 264
             +  T  +R  + +   K +   +D + +  I   M++
Sbjct: 158 THEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVN 196

>d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]} Length = 287

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Abelsone tyrosine kinase (abl)
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 55.5 bits (133), Expect = 2e-09
 Identities = 22/146 (15%), Positives = 50/146 (34%), Gaps = 16/146 (10%)

Query: 44  EIGGKKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKI------QKPAFPWEFYMYRQLD 97
           E+      +K   G G + +V++          VA+K       +   F  E  + +++ 
Sbjct: 13  EMERTDITMKHKLGGGQYGEVYEGVWKKYSL-TVAVKTLKEDTMEVEEFLKEAAVMKEIK 71

Query: 98  QRISGRERSSFGFAHRIHLYSDYSILVCDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTI 157
                +           ++         ++++ G L D +       + +  V+ +Y   
Sbjct: 72  HPNLVQLLGVCTREPPFYII-------TEFMTYGNLLDYLRECN--RQEVSAVVLLYMAT 122

Query: 158 EMLCILESLHDVGIIHGDFKPDNLLI 183
           ++   +E L     IH D    N L+
Sbjct: 123 QISSAMEYLEKKNFIHRDLAARNCLV 148

>d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]} Length = 346

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38-gamma
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 55.2 bits (132), Expect = 3e-09
 Identities = 51/319 (15%), Positives = 93/319 (29%), Gaps = 44/319 (13%)

Query: 40  NKTIEIGGKKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKI-----QKPAFPWEFYMYR 94
            KT       Y+     G G +  V  A V+G     VA+K      Q   F    Y   
Sbjct: 10  TKTAWEVRAVYRDLQPVGSGAYGAVCSA-VDGRTGAKVAIKKLYRPFQSELFAKRAYREL 68

Query: 95  QLDQRISGRERSSFGFAHRIHLYSDYSILVCDYLSQGTLQDAINSYVVIGKSMEEVLCIY 154
           +L + +             +    +      D+             ++  + + E    +
Sbjct: 69  RLLKHMRHENVIGL---LDVFTPDETLDDFTDFYLVMPFMGTDLGKLMKHEKLGEDRIQF 125

Query: 155 YTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSGPWQDQGLCLVDWGRG 214
              +ML  L  +H  GIIH D KP NL +          + D      D GL        
Sbjct: 126 LVYQMLKGLRYIHAAGIIHRDLKPGNLAV----------NEDCELKILDFGLARQADSEM 175

Query: 215 IDLHLFPDNMEFEGDCRTSGFRCIEMQEKKPWKFQVDTYGLCAIVHMML-------HNSY 267
               +       E            +     +   VD + +  I+  M+        + +
Sbjct: 176 TGYVVTRWYRAPE-----------VILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDH 224

Query: 268 MEIEKKASPDGGLVYLPKLSFKRYWKVELWKSLFTNLLNMSSGNDKEVLQNLQKSFQDY- 326
           ++  K+      +   P   F +  + +  K+    L  +   +   +L N      +  
Sbjct: 225 LDQLKEIM---KVTGTPPAEFVQRLQSDEAKNYMKGLPELEKKDFASILTNASPLAVNLL 281

Query: 327 ---LCSNPQLLKNLKELLA 342
              L  + +      E LA
Sbjct: 282 EKMLVLDAEQRVTAGEALA 300

>d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Vascular endothelial growth factor receptor 2 (kdr)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 55.3 bits (132), Expect = 3e-09
 Identities = 24/159 (15%), Positives = 52/159 (32%), Gaps = 19/159 (11%)

Query: 44  EIGGKKYQIKGCAGQGGFAKVFKAYVNGDPED----VVALKIQKPAFPWEFYMYRQLDQR 99
           E    + ++    G+G F +V +A   G  +      VA+K+ K       +     + +
Sbjct: 9   EFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELK 68

Query: 100 ISGRERSSFGFAHRIHLY---SDYSILVCDYLSQGTLQDAINSY------------VVIG 144
           I           + +          +++ ++   G L   + S              +  
Sbjct: 69  ILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYK 128

Query: 145 KSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLI 183
             +     I Y+ ++   +E L     IH D    N+L+
Sbjct: 129 DFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILL 167

>d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 7, CDK7
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 54.5 bits (130), Expect = 5e-09
 Identities = 46/216 (21%), Positives = 75/216 (34%), Gaps = 36/216 (16%)

Query: 57  GQGGFAKVFKAYVNGDPEDVVALKIQKPAFPWEFYMYRQLDQRISGRER---SSFGFAHR 113
           G+G FA V+KA      + +VA+K  K     E    +    R + RE          + 
Sbjct: 7   GEGQFATVYKARDKNTNQ-IVAIKKIKLGHRSE---AKDGINRTALREIKLLQELSHPNI 62

Query: 114 IHLY-----SDYSILVCDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHD 168
           I L           LV D++         ++       +       Y +  L  LE LH 
Sbjct: 63  IGLLDAFGHKSNISLVFDFMETDLEVIIKDN----SLVLTPSHIKAYMLMTLQGLEYLHQ 118

Query: 169 VGIIHGDFKPDNLLIRYARDELTVLDHDRSGPWQDQGLCLVDWGRGIDLHLFPDNMEFEG 228
             I+H D KP+NLL+                  ++  L L D+G          N  +  
Sbjct: 119 HWILHRDLKPNNLLLD-----------------ENGVLKLADFGLAKSFG--SPNRAYTH 159

Query: 229 DCRTSGFRCIE-MQEKKPWKFQVDTYGLCAIVHMML 263
              T  +R  E +   + +   VD + +  I+  +L
Sbjct: 160 QVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELL 195

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	351
d2j4za1	263	Aurora-related kinase 1 (aurora-2) {Human (Homo sa	100.0
d1yhwa1	293	pak1 {Human (Homo sapiens) [TaxId: 9606]}	100.0
d1nvra_	271	Cell cycle checkpoint kinase chk1 {Human (Homo sap	100.0
d2java1	269	Serine/threonine-protein kinase Nek2 {Human (Homo	100.0
d2jfla1	288	STE20-like serine/threonine-protein kinase, SLK {H	100.0
d1uu3a_	288	3-phosphoinositide dependent protein kinase-1 Pdk1	100.0
d1s9ja_	322	Dual specificity mitogen-activated protein kinase	100.0
d1o6la_	337	Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9	100.0
d1a06a_	307	Calmodulin-dependent protein kinase {Rat (Rattus n	100.0
d1koaa2	350	Twitchin, kinase domain {Caenorhabditis elegans, p	100.0
d1t4ha_	270	Protein kinase wnk1 {Human (Homo sapiens) [TaxId:	100.0
d1u5ra_	309	Serine/threonine protein kinase TAO2 {Rat (Rattus	100.0
d1koba_	352	Twitchin, kinase domain {California sea hare (Aply	100.0
d1fota_	316	cAMP-dependent PK, catalytic subunit {Baker's yeas	100.0
d1jksa_	293	Death-associated protein kinase, Dap {Human (Homo	100.0
d1omwa3	364	G-protein coupled receptor kinase 2 {Cow (Bos taur	100.0
d1xjda_	320	Protein kinase C, theta type {Human (Homo sapiens)	100.0
d2ozaa1	335	MAP kinase activated protein kinase 2, mapkap2 {Hu	100.0
d1rdqe_	350	cAMP-dependent PK, catalytic subunit {Mouse (Mus m	100.0
d1tkia_	321	Titin, kinase domain {Human (Homo sapiens) [TaxId:	100.0
d1phka_	277	gamma-subunit of glycogen phosphorylase kinase (Ph	100.0
d1uwha_	276	B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]}	100.0
d1xwsa_	273	Proto-oncogene serine/threonine-protein kinase Pim	100.0
d1opja_	287	Abelsone tyrosine kinase (abl) {Mouse (Mus musculu	100.0
d1sm2a_	263	Tyrosine-protein kinase Itk/Tsk {Human (Homo sapie	100.0
d1o6ya_	277	Mycobacterial protein kinase PknB, catalytic domai	100.0
d1blxa_	305	Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [T	100.0
d1ywna1	299	Vascular endothelial growth factor receptor 2 (kdr	100.0
d1rjba_	325	Fl cytokine receptor {Human (Homo sapiens) [TaxId:	100.0
d1ua2a_	299	Cell division protein kinase 7, CDK7 {Human (Homo	100.0
d1jpaa_	299	ephb2 receptor tyrosine kinase {Mouse (Mus musculu	100.0
d1xbba_	277	Tyrosine-protein kinase SYK {Human (Homo sapiens)	100.0
d1qpca_	272	Lymphocyte kinase (lck) {Human (Homo sapiens) [Tax	100.0
d1gz8a_	298	Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [T	100.0
d1k2pa_	258	Bruton's tyrosine kinase (Btk) {Human (Homo sapien	100.0
d1mp8a_	273	Focal adhesion kinase 1 (fak) {Human (Homo sapiens	100.0
d1u59a_	285	Tyrosine-protein kinase ZAP-70 {Human (Homo sapien	100.0
d1ob3a_	286	Cyclin-dependent PK, CDK2 {(Plasmodium falciparum)	100.0
d1mqba_	283	epha2 receptor tyrosine kinase {Human (Homo sapien	100.0
d1fmka3	285	c-src tyrosine kinase {Human (Homo sapiens) [TaxId	100.0
d1ckia_	299	Casein kinase-1, CK1 {Rat (Rattus norvegicus) [Tax	100.0
d1xkka_	317	EGF receptor tyrosine kinase, Erbb-1 {Human (Homo	100.0
d1cm8a_	346	MAP kinase p38-gamma {Human (Homo sapiens) [TaxId:	100.0
d1fgka_	299	Fibroblast growth factor receptor 1 {Human (Homo s	100.0
d1q5ka_	350	Glycogen synthase kinase-3 beta (Gsk3b) {Human (Ho	100.0
d1u46a_	273	Activated CDC42 kinase 1, ACK1 {Human (Homo sapien	100.0
d3blha1	318	Cell division protein kinase 9, CDK9 {Human (Homo	100.0
d1vzoa_	322	Ribosomal protein S6 kinase alpha 5, Msk1 {Human (	100.0
d3bqca1	328	Protein kinase CK2, alpha subunit {Rattus norvegic	100.0
d1pmea_	345	MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606	100.0
d1lufa_	301	Musk tyrosine kinase {Rat (Rattus norvegicus) [Tax	100.0
d1byga_	262	Carboxyl-terminal src kinase (csk) {Human (Homo sa	100.0
d2b1pa1	355	c-jun N-terminal kinase (jnk3s) {Human (Homo sapie	100.0
d1unla_	292	Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [T	100.0
d1t46a_	311	c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]	100.0
d1csna_	293	Casein kinase-1, CK1 {Fission yeast (Schizosacchar	100.0
d1fvra_	309	Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]}	100.0
d1p4oa_	308	Insulin-like growth factor 1 receptor {Human (Homo	100.0
d1r0pa_	311	Hepatocyte growth factor receptor, c-MET {Human (H	100.0
d2gfsa1	348	MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]	100.0
d1vjya_	303	Type I TGF-beta receptor R4 {Human (Homo sapiens)	100.0
d1q8ya_	362	Sky1p {Baker's yeast (Saccharomyces cerevisiae) [T	100.0
d1zara2	191	Rio2 serine protein kinase C-terminal domain {Arch	99.87
d1j7la_	263	Type IIIa 3',5"-aminoglycoside phosphotransferase	98.13
d1nd4a_	255	Aminoglycoside 3'-phosphotransferase IIa (Kanamyci	97.84
d2pula1	392	Methylthioribose kinase MtnK {Bacillus subtilis [T	97.69
d1zyla1	325	RdoA {Escherichia coli [TaxId: 562]}	97.03
d2ppqa1	316	Homoserine kinase ThrB {Agrobacterium tumefaciens	96.7
d1nw1a_	395	Choline kinase {Caenorhabditis elegans [TaxId: 623	94.96

>d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Aurora-related kinase 1 (aurora-2)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=9.4e-56  Score=385.16  Aligned_cols=250  Identities=19%  Similarity=0.216  Sum_probs=206.2

Q ss_pred             eeEEEEEEeeccCceEEEEEEecCCCCceEEEEecCCCCC----hHHHHHHHHHhhhccccccccccceeeecccCeeEE
Q 018699           48 KKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFP----WEFYMYRQLDQRISGRERSSFGFAHRIHLYSDYSIL  123 (351)
Q Consensus        48 ~~Y~i~~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~~----~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  123 (351)
                      ++|++.+.||+|+||+||+|+ +..+++.||+|++.+...    ......++ ........|++++.+..++..++..|+
T Consensus         6 ~dy~i~~~iG~G~fg~Vy~~~-~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E-~~il~~l~hpnIv~~~~~~~~~~~~~i   83 (263)
T d2j4za1           6 EDFEIGRPLGKGKFGNVYLAR-EKQSKFILALKVLFKAQLEKAGVEHQLRRE-VEIQSHLRHPNILRLYGYFHDATRVYL   83 (263)
T ss_dssp             GGEEEEEEEEECSSEEEEEEE-ETTTCCEEEEEEEEHHHHHHTTCHHHHHHH-HHHHHTCCCTTBCCEEEEEECSSEEEE
T ss_pred             hHeEEEEEEecCCCcEEEEEE-ECCCCcEEEEEEEchHHccChHHHHHHHHH-HHHHHhcCCCCCCeEEEEEEECCEEEE
Confidence            579999999999999999999 577899999999764211    11122222 233445678999999999999999999


Q ss_pred             EEEecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeeccCCCCCccc
Q 018699          124 VCDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSGPWQD  203 (351)
Q Consensus       124 v~e~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~~~~~~~~  203 (351)
                      ||||+++|+|.+++...    ..+++..++.++.||+.||+|||++||+||||||+||+++                 .+
T Consensus        84 vmEy~~~g~L~~~l~~~----~~l~e~~~~~i~~qi~~al~~lH~~~ivHrDiKp~Nill~-----------------~~  142 (263)
T d2j4za1          84 ILEYAPLGTVYRELQKL----SKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLG-----------------SA  142 (263)
T ss_dssp             EEECCTTCBHHHHHHHH----SSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEC-----------------TT
T ss_pred             EEeecCCCcHHHHHhhc----CCCCHHHHHHHHHHHHHHHHHHHHCCeeeeeeccccceec-----------------CC
Confidence            99999999999999873    6899999999999999999999999999999999999999                 77


Q ss_pred             CCeEEeecCCccccccCCCCccccccccCCCcccceeccCCCCCccchHhHHHHHHHHHHhCccccccccCCCCCceeee
Q 018699          204 QGLCLVDWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQEKKPWKFQVDTYGLCAIVHMMLHNSYMEIEKKASPDGGLVYL  283 (351)
Q Consensus       204 ~~~~l~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~p~~~~~~~~~~~~~~~  283 (351)
                      +.+||+|||+|....    ........||+.|+|||++.+..++.++|||||||++|+|++|..||...+.......+..
T Consensus       143 ~~~kl~DFG~a~~~~----~~~~~~~~Gt~~Y~APE~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~~~~~i~~  218 (263)
T d2j4za1         143 GELKIADFGWSVHAP----SSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISR  218 (263)
T ss_dssp             SCEEECCCCSCSCCC----CCCCEETTEEGGGCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHT
T ss_pred             CCEeecccceeeecC----CCcccccCCCCcccCHHHHcCCCCCchhhhhhHhHHHHHHhcCCCCCCCCCHHHHHHHHHc
Confidence            889999999996533    2334556799999999999999999999999999999999999999976543211111223


Q ss_pred             cCcchhhhhHHHHHHHHHHHHhcCCCCCChHHHHHHHHHHHH
Q 018699          284 PKLSFKRYWKVELWKSLFTNLLNMSSGNDKEVLQNLQKSFQD  325 (351)
Q Consensus       284 ~~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~~~~~~  325 (351)
                      ....+|...+ +.+++||.+||++||++|||+.|+|+|||..
T Consensus       219 ~~~~~p~~~s-~~~~~li~~~L~~dp~~R~t~~eil~hp~~~  259 (263)
T d2j4za1         219 VEFTFPDFVT-EGARDLISRLLKHNPSQRPMLREVLEHPWIT  259 (263)
T ss_dssp             TCCCCCTTSC-HHHHHHHHHHTCSSGGGSCCHHHHHTCHHHH
T ss_pred             CCCCCCccCC-HHHHHHHHHHccCCHhHCcCHHHHHcCcCcC
Confidence            3344555566 8899999999999999999999999999753

>d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: pak1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=5e-55  Score=386.01  Aligned_cols=252  Identities=21%  Similarity=0.221  Sum_probs=206.1

Q ss_pred             eeEEEEEEeeccCceEEEEEEecCCCCceEEEEecCCCCChHHHHHHHHHhhhccccccccccceeeecccCeeEEEEEe
Q 018699           48 KKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFPWEFYMYRQLDQRISGRERSSFGFAHRIHLYSDYSILVCDY  127 (351)
Q Consensus        48 ~~Y~i~~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~  127 (351)
                      ++|++.+.||+|+||+||+|+ +..+|+.||||++........+.+...........|++++.+..++..++.+|+||||
T Consensus        20 ~~Y~~~~~iG~G~fg~Vy~a~-~~~~~~~vAvK~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~ivmEy   98 (293)
T d1yhwa1          20 KKYTRFEKIGQGASGTVYTAM-DVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEY   98 (293)
T ss_dssp             TTBCSCEECCCSSSCEEEEEE-BTTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred             cccEEEEEEecCcCcEEEEEE-ECCCCCEEEEEEEecccChHHHHHHHHHHHHHhCCCCCEeeEeEEEEECCEEEEEEEe
Confidence            479999999999999999999 6788999999998644332222233333344556789999999999999999999999


Q ss_pred             cCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeeccCCCCCcccCCeE
Q 018699          128 LSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSGPWQDQGLC  207 (351)
Q Consensus       128 ~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~~~~~~~~~~~~  207 (351)
                      ++||+|.+++..     ..+++..++.++.||+.||.|||++||+||||||+||+++                 .++.+|
T Consensus        99 ~~gg~L~~~~~~-----~~l~~~~~~~i~~qi~~aL~yLH~~~iiHrDiKp~NILl~-----------------~~~~vk  156 (293)
T d1yhwa1          99 LAGGSLTDVVTE-----TCMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLG-----------------MDGSVK  156 (293)
T ss_dssp             CTTCBHHHHHHH-----SCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEC-----------------TTCCEE
T ss_pred             cCCCcHHHHhhc-----cCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCcHHHeEEC-----------------CCCcEe
Confidence            999999998765     4699999999999999999999999999999999999999                 778899


Q ss_pred             EeecCCccccccCCCCccccccccCCCcccceeccCCCCCccchHhHHHHHHHHHHhCccccccccCCCCCce---eeec
Q 018699          208 LVDWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQEKKPWKFQVDTYGLCAIVHMMLHNSYMEIEKKASPDGGL---VYLP  284 (351)
Q Consensus       208 l~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~p~~~~~~~~~~~~---~~~~  284 (351)
                      |+|||+|....  .........+||+.|+|||++.+..++.++|||||||++|+|++|..||...........   ...+
T Consensus       157 l~DFG~a~~~~--~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DiwSlGvilyemltG~~Pf~~~~~~~~~~~~~~~~~~  234 (293)
T d1yhwa1         157 LTDFGFCAQIT--PEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTP  234 (293)
T ss_dssp             ECCCTTCEECC--STTCCBCCCCSCGGGCCHHHHSSSCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHHCSC
T ss_pred             eccchhheeec--cccccccccccCCCccChhhhcCCCCCchhceehHhHHHHHHhhCCCCCCCCCHHHHHHHHHhCCCC
Confidence            99999997543  223344566899999999999999999999999999999999999999975443211000   0112


Q ss_pred             CcchhhhhHHHHHHHHHHHHhcCCCCCChHHHHHHHHHHHH
Q 018699          285 KLSFKRYWKVELWKSLFTNLLNMSSGNDKEVLQNLQKSFQD  325 (351)
Q Consensus       285 ~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~~~~~~  325 (351)
                      ....+..++ +.+++||.+||++||++|||+.|+|+|||..
T Consensus       235 ~~~~~~~~s-~~~~~li~~~L~~dP~~R~s~~eil~Hp~~~  274 (293)
T d1yhwa1         235 ELQNPEKLS-AIFRDFLNRCLDMDVEKRGSAKELLQHQFLK  274 (293)
T ss_dssp             CCSSGGGSC-HHHHHHHHHHTCSSTTTSCCHHHHTTCGGGG
T ss_pred             CCCCcccCC-HHHHHHHHHHccCChhHCcCHHHHhcCHhhC
Confidence            333445555 8899999999999999999999999999754

>d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell cycle checkpoint kinase chk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=4.2e-55  Score=382.47  Aligned_cols=254  Identities=17%  Similarity=0.161  Sum_probs=201.4

Q ss_pred             eeEEEEEEeeccCceEEEEEEecCCCCceEEEEecCCCCChH-HHHHHHHHhhhccccccccccceeeecccCeeEEEEE
Q 018699           48 KKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFPWE-FYMYRQLDQRISGRERSSFGFAHRIHLYSDYSILVCD  126 (351)
Q Consensus        48 ~~Y~i~~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~~~e-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e  126 (351)
                      ++|++.+.||+|+||+||+|+ +..+|+.||||++......+ .+.+......+....|++++.+...+..++..|+|||
T Consensus         5 ~dy~~~~~lG~G~fg~V~~~~-~~~~~~~vAiK~i~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~~~~~~~~~~~~~ivmE   83 (271)
T d1nvra_           5 EDWDLVQTLGEGAYGEVQLAV-NRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLE   83 (271)
T ss_dssp             TEEEEEEEEEEETTEEEEEEE-ETTTCCEEEEEEEECC-------CHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred             cceEEEEEEecCcCeEEEEEE-ECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHhCCCCCEeeEeeeeccCceeEEEEe
Confidence            579999999999999999999 57789999999986543221 1112222233455678999999999999999999999


Q ss_pred             ecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeeccCCCCCcccCCe
Q 018699          127 YLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSGPWQDQGL  206 (351)
Q Consensus       127 ~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~~~~~~~~~~~  206 (351)
                      |+++|+|.+++..    +..+++..++.++.||+.||+|||++||+||||||+||+++                 .++.+
T Consensus        84 y~~gg~L~~~l~~----~~~l~e~~~~~i~~qi~~al~ylH~~~IiHrDiKp~NILl~-----------------~~~~~  142 (271)
T d1nvra_          84 YCSGGELFDRIEP----DIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLD-----------------ERDNL  142 (271)
T ss_dssp             CCTTEEGGGGSBT----TTBCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEEC-----------------TTCCE
T ss_pred             ccCCCcHHHHHhc----CCCCCHHHHHHHHHHHHHHHHHHHHcCCccCcccHHHEEEC-----------------CCCCE
Confidence            9999999999876    46899999999999999999999999999999999999999                 67889


Q ss_pred             EEeecCCccccccCCCCccccccccCCCcccceeccCCCC-CccchHhHHHHHHHHHHhCccccccccCCCCCceee---
Q 018699          207 CLVDWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQEKKPW-KFQVDTYGLCAIVHMMLHNSYMEIEKKASPDGGLVY---  282 (351)
Q Consensus       207 ~l~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~-~~~~DiwslG~il~~l~~g~~p~~~~~~~~~~~~~~---  282 (351)
                      ||+|||+|...............+||+.|+|||++.+..+ +.++|||||||++|+|++|.+||.............   
T Consensus       143 KL~DFG~a~~~~~~~~~~~~~~~~GT~~Y~APE~~~~~~~~~~~~DiwSlGvilyeml~G~~pf~~~~~~~~~~~~~~~~  222 (271)
T d1nvra_         143 KISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEK  222 (271)
T ss_dssp             EECCCTTCEECEETTEECCBCCCCSCGGGSCTHHHHCSSBCHHHHHHHHHHHHHHHHHHSSCSCSSSSTTSHHHHHHHTT
T ss_pred             EEccchhheeeccCCccccccceeeCcCccCHhHhcCCCCCCCceeeeHhHHHHHHHHhCCCCCCCCChHHHHHHHHhcC
Confidence            9999999976543322333456689999999999988776 578999999999999999999997654331100000   


Q ss_pred             ecCcchhhhhHHHHHHHHHHHHhcCCCCCChHHHHHHHHHHH
Q 018699          283 LPKLSFKRYWKVELWKSLFTNLLNMSSGNDKEVLQNLQKSFQ  324 (351)
Q Consensus       283 ~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~~~~~  324 (351)
                      ..........+ +.+.+||.+||++||++|||+.|+|+|||.
T Consensus       223 ~~~~~~~~~~s-~~~~~li~~~L~~dP~~R~t~~eil~hpwf  263 (271)
T d1nvra_         223 KTYLNPWKKID-SAPLALLHKILVENPSARITIPDIKKDRWY  263 (271)
T ss_dssp             CTTSTTGGGSC-HHHHHHHHHHSCSSTTTSCCHHHHTTCTTT
T ss_pred             CCCCCccccCC-HHHHHHHHHHcCCChhHCcCHHHHhcCHhh
Confidence            11111112234 788999999999999999999999999863

>d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine-protein kinase Nek2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.3e-54  Score=377.83  Aligned_cols=255  Identities=14%  Similarity=0.117  Sum_probs=195.7

Q ss_pred             eeEEEEEEeeccCceEEEEEEecCCCCceEEEEecCCCCChHHHH--HHHHHhhhccccccccccceeeecc--cCeeEE
Q 018699           48 KKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFPWEFYM--YRQLDQRISGRERSSFGFAHRIHLY--SDYSIL  123 (351)
Q Consensus        48 ~~Y~i~~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~~~e~~~--~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~l  123 (351)
                      ++|++.+.||+|+||+||+|+ +..+|+.||+|++......+...  +...........|++++....++..  .+.+|+
T Consensus         4 edy~~~~~iG~G~fg~Vy~~~-~~~~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~~~i   82 (269)
T d2java1           4 EDYEVLYTIGTGSYGRCQKIR-RKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYI   82 (269)
T ss_dssp             GGEEEEEEEEECSSEEEEEEE-ETTTCCEEEEEEECCTTSCHHHHHHHHHHHHHTTSCCCTTBCCEEEEEEC----CEEE
T ss_pred             hhCEEeEEEecCCCeEEEEEE-ECCCCCEEEEEEEChhhCCHHHHHHHHHHHHHHHHCCCCCEeeEEEEEEeCCCCEEEE
Confidence            579999999999999999999 57889999999988765444322  2222234556688999888876643  567899


Q ss_pred             EEEecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCC-----ceecCCCCCcEEEeecCCcceeeccCCC
Q 018699          124 VCDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVG-----IIHGDFKPDNLLIRYARDELTVLDHDRS  198 (351)
Q Consensus       124 v~e~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~-----i~H~dl~p~Nill~~~~~~~~~~~~~~~  198 (351)
                      ||||+++|+|.+++......+..+++..++.++.||+.||.|||++|     |+||||||+||+++              
T Consensus        83 vmEy~~~g~L~~~i~~~~~~~~~l~e~~~~~i~~qi~~al~ylH~~~~~~~~IiHrDiKp~NIll~--------------  148 (269)
T d2java1          83 VMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLD--------------  148 (269)
T ss_dssp             EEECCTTEEHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHHCC---------CCGGGEEEC--------------
T ss_pred             EEecCCCCcHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCCEEeCcCchhhcCcC--------------
Confidence            99999999999999876655778999999999999999999999976     99999999999999              


Q ss_pred             CCcccCCeEEeecCCccccccCCCCccccccccCCCcccceeccCCCCCccchHhHHHHHHHHHHhCccccccccCCCCC
Q 018699          199 GPWQDQGLCLVDWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQEKKPWKFQVDTYGLCAIVHMMLHNSYMEIEKKASPDG  278 (351)
Q Consensus       199 ~~~~~~~~~l~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~p~~~~~~~~~~  278 (351)
                         .++.+||+|||++.....  .........||+.|+|||++.+..++.++|||||||++|+|++|..||...+.....
T Consensus       149 ---~~~~vkl~DFG~a~~~~~--~~~~~~~~~gt~~Y~APE~l~~~~~~~~~DIwSlGvilyel~tg~~Pf~~~~~~~~~  223 (269)
T d2java1         149 ---GKQNVKLGDFGLARILNH--DTSFAKAFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKELA  223 (269)
T ss_dssp             ---TTSCEEECCHHHHHHC-------------CCCSCCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHH
T ss_pred             ---CCCcEEEeeccceeeccc--CCCccccCCCCcccCCHHHHcCCCCChHHHHHhhCHHHHHHhhCCCCCCCCCHHHHH
Confidence               778899999999875431  222334568999999999999999999999999999999999999999754432110


Q ss_pred             cee-eecCcchhhhhHHHHHHHHHHHHhcCCCCCChHHHHHHHHHH
Q 018699          279 GLV-YLPKLSFKRYWKVELWKSLFTNLLNMSSGNDKEVLQNLQKSF  323 (351)
Q Consensus       279 ~~~-~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~~~~  323 (351)
                      ..+ .......+..++ +.+.+||.+||++||++|||+.|+|+|||
T Consensus       224 ~~i~~~~~~~~~~~~s-~~l~~li~~~L~~dp~~Rps~~ell~hp~  268 (269)
T d2java1         224 GKIREGKFRRIPYRYS-DELNEIITRMLNLKDYHRPSVEEILENPL  268 (269)
T ss_dssp             HHHHHTCCCCCCTTSC-HHHHHHHHHHTCSSGGGSCCHHHHHTSTT
T ss_pred             HHHHcCCCCCCCcccC-HHHHHHHHHHcCCChhHCcCHHHHHhCCc
Confidence            001 111223444455 88999999999999999999999999997

>d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: STE20-like serine/threonine-protein kinase, SLK
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3.4e-54  Score=380.19  Aligned_cols=253  Identities=19%  Similarity=0.217  Sum_probs=204.8

Q ss_pred             eeEEEEEEeeccCceEEEEEEecCCCCceEEEEecCCCCChHHHHHHHHHhhhccccccccccceeeecccCeeEEEEEe
Q 018699           48 KKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFPWEFYMYRQLDQRISGRERSSFGFAHRIHLYSDYSILVCDY  127 (351)
Q Consensus        48 ~~Y~i~~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~  127 (351)
                      +.|++.+.||+|+||+||+|+ +..+|+.||+|++......+...+......+....|++++.+..++..++..|+||||
T Consensus        12 d~Y~i~~~iG~G~fg~Vy~~~-~~~~~~~vAvK~i~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~lvmEy   90 (288)
T d2jfla1          12 DFWEIIGELGDGAFGKVYKAQ-NKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEF   90 (288)
T ss_dssp             GTEEEEEEEEEETTEEEEEEE-ETTTCCEEEEEEEECSSSGGGGGTHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred             cCeEEeEEEeeCCCcEEEEEE-ECCCCeEEEEEEECcCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCeEEEEEec
Confidence            469999999999999999999 5788999999998765444333222222334456789999999999999999999999


Q ss_pred             cCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeeccCCCCCcccCCeE
Q 018699          128 LSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSGPWQDQGLC  207 (351)
Q Consensus       128 ~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~~~~~~~~~~~~  207 (351)
                      +++|+|.+++...   +..+++..++.++.||+.||.|||++||+||||||+||+++                 .++.+|
T Consensus        91 ~~~g~L~~~~~~~---~~~l~e~~~~~i~~qi~~gL~ylH~~~ivHrDiKp~NIll~-----------------~~~~~K  150 (288)
T d2jfla1          91 CAGGAVDAVMLEL---ERPLTESQIQVVCKQTLDALNYLHDNKIIHRDLKAGNILFT-----------------LDGDIK  150 (288)
T ss_dssp             CTTEEHHHHHHHH---TSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEC-----------------TTSCEE
T ss_pred             CCCCcHHHHHHhc---CCCCCHHHHHHHHHHHHHHHHHHHHCCEEEeecChhheeEC-----------------CCCCEE
Confidence            9999999998764   56799999999999999999999999999999999999999                 778899


Q ss_pred             EeecCCccccccCCCCccccccccCCCcccceecc-----CCCCCccchHhHHHHHHHHHHhCccccccccCCCCCcee-
Q 018699          208 LVDWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQE-----KKPWKFQVDTYGLCAIVHMMLHNSYMEIEKKASPDGGLV-  281 (351)
Q Consensus       208 l~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~-----~~~~~~~~DiwslG~il~~l~~g~~p~~~~~~~~~~~~~-  281 (351)
                      |+|||+|......  ........||+.|+|||++.     +..|+.++|||||||++|+|++|..||...+........ 
T Consensus       151 l~DFG~a~~~~~~--~~~~~~~~Gt~~y~APE~l~~~~~~~~~y~~k~DiwSlGvilyemltg~~Pf~~~~~~~~~~~i~  228 (288)
T d2jfla1         151 LADFGVSAKNTRT--IQRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPPHHELNPMRVLLKIA  228 (288)
T ss_dssp             ECCCTTCEECHHH--HHHHTCCCSCCTTCCHHHHTTCSTTTSSTTTHHHHHHHHHHHHHHHHSSCTTTTSCGGGHHHHHH
T ss_pred             EEechhhhccCCC--cccccccccccccCCHHHHhhcccCCCCCChhhhHHHHHHHHHHHhhCCCCCCCCCHHHHHHHHH
Confidence            9999998643211  12234567999999999983     456889999999999999999999999765433110000 


Q ss_pred             --eecCcchhhhhHHHHHHHHHHHHhcCCCCCChHHHHHHHHHHH
Q 018699          282 --YLPKLSFKRYWKVELWKSLFTNLLNMSSGNDKEVLQNLQKSFQ  324 (351)
Q Consensus       282 --~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~~~~~  324 (351)
                        ..+....+..++ +.+++||.+||++||++|||+.|+|+|||.
T Consensus       229 ~~~~~~~~~~~~~s-~~~~~li~~~L~~dp~~R~t~~ell~hp~~  272 (288)
T d2jfla1         229 KSEPPTLAQPSRWS-SNFKDFLKKCLEKNVDARWTTSQLLQHPFV  272 (288)
T ss_dssp             HSCCCCCSSGGGSC-HHHHHHHHHHSCSSTTTSCCHHHHTTSGGG
T ss_pred             cCCCCCCCccccCC-HHHHHHHHHHccCChhHCcCHHHHhcCccc
Confidence              112333445566 889999999999999999999999999864

>d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: 3-phosphoinositide dependent protein kinase-1 Pdk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.3e-54  Score=382.70  Aligned_cols=252  Identities=18%  Similarity=0.168  Sum_probs=199.4

Q ss_pred             eeEEEEEEeeccCceEEEEEEecCCCCceEEEEecCCCCC---hHHHHHHHHHhhhccccccccccceeeecccCeeEEE
Q 018699           48 KKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFP---WEFYMYRQLDQRISGRERSSFGFAHRIHLYSDYSILV  124 (351)
Q Consensus        48 ~~Y~i~~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~~---~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv  124 (351)
                      ++|++.+.||+|+||+||+|+ +..+|+.||||++.+...   .....+......+....|++++.+..++...+.+|+|
T Consensus         8 ~dy~i~~~lG~G~fg~Vy~a~-~~~~~~~vAvK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~iv   86 (288)
T d1uu3a_           8 EDFKFGKILGEGSFSTVVLAR-ELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFG   86 (288)
T ss_dssp             GGEEEEEEEEECSSCEEEEEE-ETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCSTTBCCEEEEEECSSEEEEE
T ss_pred             CCCEEEEEEeeCCCeEEEEEE-ECCCCCEEEEEEEehHHccCHHHHHHHHHHHHHHHHcCCCCeeEEEEEEEECCEEEEE
Confidence            579999999999999999999 567899999999864211   1112222222233455789999999999889999999


Q ss_pred             EEecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeeccCCCCCcccC
Q 018699          125 CDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSGPWQDQ  204 (351)
Q Consensus       125 ~e~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~~~~~~~~~  204 (351)
                      |||++||+|.+++...    +.+++..++.++.|++.||.|||++||+||||||+||+++                 .++
T Consensus        87 mEy~~gg~L~~~~~~~----~~l~e~~~~~~~~qi~~al~ylH~~~iiHrDiKp~NIll~-----------------~~~  145 (288)
T d1uu3a_          87 LSYAKNGELLKYIRKI----GSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLN-----------------EDM  145 (288)
T ss_dssp             ECCCTTEEHHHHHHHH----SSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEC-----------------TTS
T ss_pred             EEccCCCCHHHhhhcc----CCCCHHHHHHHHHHHHHHHHhhccccEEcCcCCccccccC-----------------CCc
Confidence            9999999999998873    6899999999999999999999999999999999999999                 778


Q ss_pred             CeEEeecCCccccccCCCCccccccccCCCcccceeccCCCCCccchHhHHHHHHHHHHhCccccccccCCCCCceeeec
Q 018699          205 GLCLVDWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQEKKPWKFQVDTYGLCAIVHMMLHNSYMEIEKKASPDGGLVYLP  284 (351)
Q Consensus       205 ~~~l~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~p~~~~~~~~~~~~~~~~  284 (351)
                      .++|+|||+|...............+||+.|+|||++.+..++.++|||||||++|+|++|..||...+.......+...
T Consensus       146 ~vkl~DFG~a~~~~~~~~~~~~~~~~GT~~Y~APE~~~~~~~~~~~DiwSlGvilyell~g~~Pf~~~~~~~~~~~i~~~  225 (288)
T d1uu3a_         146 HIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKL  225 (288)
T ss_dssp             CEEECCCTTCEECC----------CCCCGGGCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHTT
T ss_pred             eEEecccccceecccCCcccccccccCCccccCceeeccCCCCcccceehhhHHHHHHhhCCCCCCCcCHHHHHHHHHcC
Confidence            89999999997654333344445668999999999999999999999999999999999999999765432111111222


Q ss_pred             CcchhhhhHHHHHHHHHHHHhcCCCCCChHHHHHHHHH
Q 018699          285 KLSFKRYWKVELWKSLFTNLLNMSSGNDKEVLQNLQKS  322 (351)
Q Consensus       285 ~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~~~  322 (351)
                      ...+|...+ +.+++||.+||++||++|||++|++.++
T Consensus       226 ~~~~p~~~s-~~~~~li~~~L~~dP~~R~t~~e~~~~~  262 (288)
T d1uu3a_         226 EYDFPEKFF-PKARDLVEKLLVLDATKRLGCEEMEGYG  262 (288)
T ss_dssp             CCCCCTTCC-HHHHHHHHTTSCSSGGGSTTSGGGTCHH
T ss_pred             CCCCCccCC-HHHHHHHHHHccCCHhHCcCHHHHcCCH
Confidence            334455555 8899999999999999999999875543

>d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=5.9e-53  Score=378.80  Aligned_cols=257  Identities=15%  Similarity=0.108  Sum_probs=203.9

Q ss_pred             EEcCeeEEEEEEeeccCceEEEEEEecCCCCceEEEEecCCCCChH-HHHHHHHHhhhccccccccccceeeecccCeeE
Q 018699           44 EIGGKKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFPWE-FYMYRQLDQRISGRERSSFGFAHRIHLYSDYSI  122 (351)
Q Consensus        44 ~i~~~~Y~i~~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~~~e-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  122 (351)
                      ++..++|++.+.||+|+||+||+|+ +..+|+.||+|++....... ...+......+....|++++.+.+++..++.+|
T Consensus         2 el~~d~y~~~~~iG~G~fg~V~~~~-~~~~~~~vAiK~i~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~   80 (322)
T d1s9ja_           2 ELKDDDFEKISELGAGNGGVVFKVS-HKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEIS   80 (322)
T ss_dssp             CCCGGGEEEEEEEECCSSCCEEEEE-ETTTTEEEEEEEEECCCCTTHHHHHHHHGGGGGGCCCTTBCCEEEEEECSSEEE
T ss_pred             CCCccCCEEEEEEecCCCeEEEEEE-ECCCCcEEEEEEEChhhCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEE
Confidence            3556899999999999999999999 57889999999987653322 222222233455667899999999999999999


Q ss_pred             EEEEecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHH-CCceecCCCCCcEEEeecCCcceeeccCCCCCc
Q 018699          123 LVCDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHD-VGIIHGDFKPDNLLIRYARDELTVLDHDRSGPW  201 (351)
Q Consensus       123 lv~e~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~-~~i~H~dl~p~Nill~~~~~~~~~~~~~~~~~~  201 (351)
                      +||||++||+|.+++.+.    ..+++..++.++.|++.||.|||+ +||+||||||+||+++                 
T Consensus        81 iVmEy~~gg~L~~~l~~~----~~l~~~~~~~~~~qil~aL~yLH~~~~IiHRDiKP~NILl~-----------------  139 (322)
T d1s9ja_          81 ICMEHMDGGSLDQVLKKA----GRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVN-----------------  139 (322)
T ss_dssp             EEEECCTTEEHHHHHHHH----SSCCHHHHHHHHHHHHHHHHHHHHHHCCCCSCCSGGGEEEC-----------------
T ss_pred             EEEEcCCCCcHHHHHhhc----CCCCHHHHHHHHHHHHHHHHHHHHhCCEEccccCHHHeeEC-----------------
Confidence            999999999999999874    679999999999999999999997 5999999999999999                 


Q ss_pred             ccCCeEEeecCCccccccCCCCccccccccCCCcccceeccCCCCCccchHhHHHHHHHHHHhCccccccccCCCC----
Q 018699          202 QDQGLCLVDWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQEKKPWKFQVDTYGLCAIVHMMLHNSYMEIEKKASPD----  277 (351)
Q Consensus       202 ~~~~~~l~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~p~~~~~~~~~----  277 (351)
                      .++.+||+|||+|.....    ....+.+||+.|+|||++.+..|+.++||||+||++|+|++|+.||...+....    
T Consensus       140 ~~~~vkl~DFGla~~~~~----~~~~~~~GT~~Y~APEvl~~~~y~~~~DiWSlGvil~ell~G~~Pf~~~~~~~~~~~~  215 (322)
T d1s9ja_         140 SRGEIKLCDFGVSGQLID----SMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMF  215 (322)
T ss_dssp             TTCCEEECCCCCCHHHHH----HTC---CCSSCCCCHHHHHCSCCCTTHHHHHHHHHHHHHHHSSCCSSCCCTTHHHHHC
T ss_pred             CCCCEEEeeCCCccccCC----CccccccCCccccCchHHcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHH
Confidence            778899999999975431    223456899999999999999999999999999999999999999965432100    


Q ss_pred             -----Cce-------------------ee---------------ecCcchh-hhhHHHHHHHHHHHHhcCCCCCChHHHH
Q 018699          278 -----GGL-------------------VY---------------LPKLSFK-RYWKVELWKSLFTNLLNMSSGNDKEVLQ  317 (351)
Q Consensus       278 -----~~~-------------------~~---------------~~~~~~~-~~~~~~~~~~li~~~L~~dP~~R~s~~e  317 (351)
                           +..                   ..               ..++..+ ..++ .++.+||.+||.+||++|||+.|
T Consensus       216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s-~~~~dli~~~L~~dP~~R~ta~e  294 (322)
T d1s9ja_         216 GCQVEGDAAETPPRPRTPGRPLSSYGMDSRPPMAIFELLDYIVNEPPPKLPSGVFS-LEFQDFVNKCLIKNPAERADLKQ  294 (322)
T ss_dssp             ------------------------------CCCCHHHHHHHHHTSCCCCCCBTTBC-HHHHHHHHHHTCSSTTTSCCHHH
T ss_pred             HHHhcCCcccCCcccccccccccccccccccchhHHHHHhhhhccCCccCccccCC-HHHHHHHHHHcCCChhHCcCHHH
Confidence                 000                   00               0001111 1123 78999999999999999999999


Q ss_pred             HHHHHHHHHH
Q 018699          318 NLQKSFQDYL  327 (351)
Q Consensus       318 ~l~~~~~~~~  327 (351)
                      +|+|||....
T Consensus       295 ~L~Hpf~~~~  304 (322)
T d1s9ja_         295 LMVHAFIKRS  304 (322)
T ss_dssp             HHTSHHHHHH
T ss_pred             HhhCHhhCcC
Confidence            9999986543

>d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Pkb kinase (Akt-2)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3.1e-53  Score=381.49  Aligned_cols=253  Identities=19%  Similarity=0.224  Sum_probs=209.3

Q ss_pred             CeeEEEEEEeeccCceEEEEEEecCCCCceEEEEecCCCCC---hHHHHHHHHHhhhccccccccccceeeecccCeeEE
Q 018699           47 GKKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFP---WEFYMYRQLDQRISGRERSSFGFAHRIHLYSDYSIL  123 (351)
Q Consensus        47 ~~~Y~i~~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~~---~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  123 (351)
                      -++|++++.||+|+||+||+|+ +..+|+.||||++.+...   ............+....|++++....++...+.+|+
T Consensus         4 l~dy~~~~~lG~G~fg~V~~~~-~~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~i   82 (337)
T d1o6la_           4 MNDFDYLKLLGKGTFGKVILVR-EKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCF   82 (337)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEE-ETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCCTTBCCEEEEEECSSEEEE
T ss_pred             hHhcEEEEEEecCcCeEEEEEE-ECCCCCEEEEEEEchhhccCHHHHHHHHHHHHHHHhCCCCCEEEEEeeecccccccc
Confidence            3589999999999999999999 578899999999874321   111222222233455678999999999999999999


Q ss_pred             EEEecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeeccCCCCCccc
Q 018699          124 VCDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSGPWQD  203 (351)
Q Consensus       124 v~e~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~~~~~~~~  203 (351)
                      ||||++||+|.+++..    +..+++..++.++.||+.||.|||++||+||||||+||+++                 .+
T Consensus        83 v~ey~~gg~L~~~~~~----~~~~~e~~~~~~~~qil~al~ylH~~~iiHRDlKP~NILl~-----------------~~  141 (337)
T d1o6la_          83 VMEYANGGELFFHLSR----ERVFTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLMLD-----------------KD  141 (337)
T ss_dssp             EEECCTTCBHHHHHHH----HSCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEEC-----------------TT
T ss_pred             ceeccCCCchhhhhhc----ccCCcHHHHHHHHHHHhhhhhhhhhcCccccccCHHHeEec-----------------CC
Confidence            9999999999999988    46899999999999999999999999999999999999999                 78


Q ss_pred             CCeEEeecCCccccccCCCCccccccccCCCcccceeccCCCCCccchHhHHHHHHHHHHhCccccccccCCCCCceeee
Q 018699          204 QGLCLVDWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQEKKPWKFQVDTYGLCAIVHMMLHNSYMEIEKKASPDGGLVYL  283 (351)
Q Consensus       204 ~~~~l~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~p~~~~~~~~~~~~~~~  283 (351)
                      +.+||+|||+|....  .........+||+.|+|||++.+..|+.++|||||||++|+|++|.+||...+..........
T Consensus       142 g~vkl~DFG~a~~~~--~~~~~~~~~~GT~~Y~aPE~~~~~~y~~~~DiwSlGvilyeml~G~~pf~~~~~~~~~~~i~~  219 (337)
T d1o6la_         142 GHIKITDFGLCKEGI--SDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILM  219 (337)
T ss_dssp             SCEEECCCTTCBCSC--CTTCCBCCCEECGGGCCGGGGSSSCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHH
T ss_pred             CCEEEeecccccccc--cCCcccccceeCHHHhhhhhccCCCCChhhcccchhhHHHHHHHCCCCCCCcCHHHHHHHHhc
Confidence            889999999997532  223345567899999999999999999999999999999999999999987654322222333


Q ss_pred             cCcchhhhhHHHHHHHHHHHHhcCCCCCChH-----HHHHHHHHHH
Q 018699          284 PKLSFKRYWKVELWKSLFTNLLNMSSGNDKE-----VLQNLQKSFQ  324 (351)
Q Consensus       284 ~~~~~~~~~~~~~~~~li~~~L~~dP~~R~s-----~~e~l~~~~~  324 (351)
                      ....+|..++ +.+++||.+||++||.+|++     +.|+++|||.
T Consensus       220 ~~~~~p~~~s-~~~~dli~~~L~~dP~~R~~~~~~~~~eil~Hp~f  264 (337)
T d1o6la_         220 EEIRFPRTLS-PEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRFF  264 (337)
T ss_dssp             CCCCCCTTSC-HHHHHHHHHHTCSSTTTSTTCSTTTHHHHHTSGGG
T ss_pred             CCCCCCccCC-HHHHHHHHhhccCCchhhcccccccHHHHHcCccc
Confidence            4445566666 88999999999999999995     8999999874

>d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Calmodulin-dependent protein kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=100.00  E-value=2.8e-53  Score=377.69  Aligned_cols=255  Identities=19%  Similarity=0.204  Sum_probs=191.0

Q ss_pred             CeeEEEEEEeeccCceEEEEEEecCCCCceEEEEecCCCCChHH-HHHHHHHhhhccccccccccceeeecccCeeEEEE
Q 018699           47 GKKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFPWEF-YMYRQLDQRISGRERSSFGFAHRIHLYSDYSILVC  125 (351)
Q Consensus        47 ~~~Y~i~~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~~~e~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~  125 (351)
                      .++|++.+.||+|+||+||+|+ +..+|+.||||++.+...... ..+......+....|++++.+..++..++.+|+||
T Consensus         8 ~d~Y~~~~~lG~G~fg~Vy~~~-~~~~~~~vAvK~i~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~lvm   86 (307)
T d1a06a_           8 RDIYDFRDVLGTGAFSEVILAE-DKRTQKLVAIKCIAKKALEGKEGSMENEIAVLHKIKHPNIVALDDIYESGGHLYLIM   86 (307)
T ss_dssp             GGTEEEEEESBSGGGGGEEEEE-ETTTCCEEEEEEEEC----------CHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             ccceEEEEEEeeccCeEEEEEE-ECCCCCEEEEEEEchHHhhhHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEE
Confidence            3579999999999999999999 567899999999875432211 11111122334557899999999999999999999


Q ss_pred             EecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeeccCCCCCcccCC
Q 018699          126 DYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSGPWQDQG  205 (351)
Q Consensus       126 e~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~~~~~~~~~~  205 (351)
                      ||++||+|.+++..    ...+++..+..++.||+.||+|||++||+||||||+||++...+              .++.
T Consensus        87 E~~~gg~L~~~l~~----~~~l~e~~~~~~~~qi~~al~ylH~~~iiHrDiKp~Nil~~~~~--------------~~~~  148 (307)
T d1a06a_          87 QLVSGGELFDRIVE----KGFYTERDASRLIFQVLDAVKYLHDLGIVHRDLKPENLLYYSLD--------------EDSK  148 (307)
T ss_dssp             CCCCSCBHHHHHHT----CSCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESSSS--------------TTCC
T ss_pred             eccCCCcHHHhhhc----ccCCCHHHHHHHHHHHHHHHHhhhhceeeeEEecccceeecccC--------------CCce
Confidence            99999999999987    57899999999999999999999999999999999999997432              4677


Q ss_pred             eEEeecCCccccccCCCCccccccccCCCcccceeccCCCCCccchHhHHHHHHHHHHhCccccccccCCCCCce----e
Q 018699          206 LCLVDWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQEKKPWKFQVDTYGLCAIVHMMLHNSYMEIEKKASPDGGL----V  281 (351)
Q Consensus       206 ~~l~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~p~~~~~~~~~~~~----~  281 (351)
                      +||+|||+|....   ......+.+||+.|+|||++.+..|+.++|||||||++|+|++|.+||...........    .
T Consensus       149 vkl~DFG~a~~~~---~~~~~~~~~GT~~y~APE~~~~~~~~~~~DiwSlGvilyell~g~~Pf~~~~~~~~~~~i~~~~  225 (307)
T d1a06a_         149 IMISDFGLSKMED---PGSVLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAE  225 (307)
T ss_dssp             EEECCC---------------------CTTSCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHTTC
T ss_pred             EEEeccceeEEcc---CCCeeeeeeeCccccCcHHHcCCCCCcHHHhhhhhHHHHHHHhCCCCCCCCCHHHHHHHHhccC
Confidence            9999999986432   23334566899999999999999999999999999999999999999975432210000    0


Q ss_pred             eecCcchhhhhHHHHHHHHHHHHhcCCCCCChHHHHHHHHHHH
Q 018699          282 YLPKLSFKRYWKVELWKSLFTNLLNMSSGNDKEVLQNLQKSFQ  324 (351)
Q Consensus       282 ~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~~~~~  324 (351)
                      .....+.+..++ +.+++||.+||++||++|||+.|+++|||.
T Consensus       226 ~~~~~~~~~~~s-~~~~~li~~~L~~dP~~R~s~~eil~hp~~  267 (307)
T d1a06a_         226 YEFDSPYWDDIS-DSAKDFIRHLMEKDPEKRFTCEQALQHPWI  267 (307)
T ss_dssp             CCCCTTTTTTSC-HHHHHHHHHHSCSSGGGSCCHHHHHHSTTT
T ss_pred             CCCCCccccCCC-HHHHHHHHHHccCCHhHCcCHHHHhcCHhh
Confidence            112222233344 789999999999999999999999999874

>d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: Caenorhabditis elegans, pjk4 [TaxId: 6239]

Probab=100.00  E-value=6e-53  Score=381.81  Aligned_cols=254  Identities=18%  Similarity=0.198  Sum_probs=206.7

Q ss_pred             eeEEEEEEeeccCceEEEEEEecCCCCceEEEEecCCCCChHHHHHHHHHhhhccccccccccceeeecccCeeEEEEEe
Q 018699           48 KKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFPWEFYMYRQLDQRISGRERSSFGFAHRIHLYSDYSILVCDY  127 (351)
Q Consensus        48 ~~Y~i~~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~  127 (351)
                      ++|++.+.||+|+||+||+|+ +..+|+.||||++......+.+.+......+....|++++.+..++..++.+|+||||
T Consensus        26 ~~Y~i~~~lG~G~fg~Vy~~~-~~~~g~~vAvK~i~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~ivmE~  104 (350)
T d1koaa2          26 DHYDIHEELGTGAFGVVHRVT-ERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEF  104 (350)
T ss_dssp             GTEEEEEEEEEETTEEEEEEE-ETTTTEEEEEEEECCCSHHHHHHHHHHHHHHHHTCCTTBCCEEEEEEETTEEEEEECC
T ss_pred             cCeEEEEEEecCcCeEEEEEE-ECCCCCEEEEEEEcccchhhHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEEc
Confidence            589999999999999999999 5788999999999876554444333333445556789999999999999999999999


Q ss_pred             cCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeeccCCCCCcccCCeE
Q 018699          128 LSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSGPWQDQGLC  207 (351)
Q Consensus       128 ~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~~~~~~~~~~~~  207 (351)
                      ++||+|.+++...   +..+++..++.++.||+.||.|||++||+||||||+||+++.+               .++.+|
T Consensus       105 ~~gg~L~~~l~~~---~~~l~e~~~~~i~~qi~~aL~ylH~~~iiHrDiKp~NIll~~~---------------~~~~vk  166 (350)
T d1koaa2         105 MSGGELFEKVADE---HNKMSEDEAVEYMRQVCKGLCHMHENNYVHLDLKPENIMFTTK---------------RSNELK  166 (350)
T ss_dssp             CCSCBHHHHHTCT---TSCBCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESST---------------TSCCEE
T ss_pred             CCCCCHHHHHHhh---cCCCCHHHHHHHHHHHHHHHHHHHhcCCeeeeechhHeeeccC---------------CCCeEE
Confidence            9999999998653   4679999999999999999999999999999999999999732               346799


Q ss_pred             EeecCCccccccCCCCccccccccCCCcccceeccCCCCCccchHhHHHHHHHHHHhCccccccccCCCCCcee----ee
Q 018699          208 LVDWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQEKKPWKFQVDTYGLCAIVHMMLHNSYMEIEKKASPDGGLV----YL  283 (351)
Q Consensus       208 l~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~p~~~~~~~~~~~~~----~~  283 (351)
                      |+|||++....   .........||+.|+|||++.+..++.++|||||||++|+|++|..||...+.......+    ..
T Consensus       167 L~DFG~a~~~~---~~~~~~~~~gT~~Y~aPEv~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~~~~~i~~~~~~  243 (350)
T d1koaa2         167 LIDFGLTAHLD---PKQSVKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGENDDETLRNVKSCDWN  243 (350)
T ss_dssp             ECCCTTCEECC---TTSCEEEECSCTTTCCHHHHHTCCBCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCC
T ss_pred             Eeecchheecc---cccccceecCcccccCHHHHcCCCCChhHhhhhhhHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCC
Confidence            99999997543   233445678999999999999999999999999999999999999999754332110000    11


Q ss_pred             cCcchhhhhHHHHHHHHHHHHhcCCCCCChHHHHHHHHHHH
Q 018699          284 PKLSFKRYWKVELWKSLFTNLLNMSSGNDKEVLQNLQKSFQ  324 (351)
Q Consensus       284 ~~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~~~~~  324 (351)
                      .........+ +.+++||.+||++||++|||+.|+|+|||.
T Consensus       244 ~~~~~~~~~s-~~~~~li~~~L~~dP~~R~t~~eil~hp~~  283 (350)
T d1koaa2         244 MDDSAFSGIS-EDGKDFIRKLLLADPNTRMTIHQALEHPWL  283 (350)
T ss_dssp             SCCGGGGGCC-HHHHHHHHHHCCSSGGGSCCHHHHHHSTTT
T ss_pred             CCcccccCCC-HHHHHHHHHHccCChhHCcCHHHHhcCccc
Confidence            1222223344 789999999999999999999999999874

>d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase wnk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=4.8e-52  Score=363.03  Aligned_cols=251  Identities=19%  Similarity=0.176  Sum_probs=196.8

Q ss_pred             cCeeEEEEEEeeccCceEEEEEEecCCCCceEEEEecCCCCCh--HHHHHHHHHhhhccccccccccceeeecc----cC
Q 018699           46 GGKKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFPW--EFYMYRQLDQRISGRERSSFGFAHRIHLY----SD  119 (351)
Q Consensus        46 ~~~~Y~i~~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~~~--e~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~  119 (351)
                      .|+-|++.++||+|+||+||+|+ +..+++.||+|++......  +...+....+......|++++...+++..    ..
T Consensus         7 ~gry~~~~~~iG~G~fg~Vy~~~-~~~~~~~va~K~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~~   85 (270)
T d1t4ha_           7 DGRFLKFDIEIGRGSFKTVYKGL-DTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKK   85 (270)
T ss_dssp             TSCEEEEEEEEEECSSEEEEEEE-ETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEESSSCE
T ss_pred             CCCEEEeeeEEecCcCcEEEEEE-ECCCCeEEEEEEEchhhCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEeeccccCC
Confidence            34556889999999999999999 5678899999998654322  22223333344556678999888877643    45


Q ss_pred             eeEEEEEecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCC--ceecCCCCCcEEEeecCCcceeeccCC
Q 018699          120 YSILVCDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVG--IIHGDFKPDNLLIRYARDELTVLDHDR  197 (351)
Q Consensus       120 ~~~lv~e~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~--i~H~dl~p~Nill~~~~~~~~~~~~~~  197 (351)
                      .+|+||||+++|+|.+++.+    ...+++..++.++.||+.||+|||+++  |+||||||+||+++.            
T Consensus        86 ~~~ivmE~~~~g~L~~~l~~----~~~~~~~~~~~~~~qi~~gl~yLH~~~~~IiHrDiKp~NILl~~------------  149 (270)
T d1t4ha_          86 CIVLVTELMTSGTLKTYLKR----FKVMKIKVLRSWCRQILKGLQFLHTRTPPIIHRDLKCDNIFITG------------  149 (270)
T ss_dssp             EEEEEEECCCSCBHHHHHHH----HSSCCHHHHHHHHHHHHHHHHHHHTSSSCCCCSCCCGGGEEESS------------
T ss_pred             EEEEEEeCCCCCcHHHHHhc----cccccHHHHHHHHHHHHHHHHHHHHCCCCEEeCCcChhhceeeC------------
Confidence            68999999999999999987    368999999999999999999999998  999999999999962            


Q ss_pred             CCCcccCCeEEeecCCccccccCCCCccccccccCCCcccceeccCCCCCccchHhHHHHHHHHHHhCccccccccCCCC
Q 018699          198 SGPWQDQGLCLVDWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQEKKPWKFQVDTYGLCAIVHMMLHNSYMEIEKKASPD  277 (351)
Q Consensus       198 ~~~~~~~~~~l~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~p~~~~~~~~~  277 (351)
                          .++.+||+|||+|....    .......+||+.|+|||++.+ .++.++|||||||++|+|++|..||........
T Consensus       150 ----~~~~~Kl~DFGla~~~~----~~~~~~~~GT~~Y~aPE~~~~-~~~~~~DIwSlGvilyel~~g~~Pf~~~~~~~~  220 (270)
T d1t4ha_         150 ----PTGSVKIGDLGLATLKR----ASFAKAVIGTPEFMAPEMYEE-KYDESVDVYAFGMCMLEMATSEYPYSECQNAAQ  220 (270)
T ss_dssp             ----TTSCEEECCTTGGGGCC----TTSBEESCSSCCCCCGGGGGT-CCCTHHHHHHHHHHHHHHHHSSCTTTTCSSHHH
T ss_pred             ----CCCCEEEeecCcceecc----CCccCCcccCccccCHHHhCC-CCCCcCchhhHHHHHHHHHHCCCCCCCcccHHH
Confidence                35679999999996422    233456689999999999876 589999999999999999999999964332100


Q ss_pred             -Cceee--ecCcchhhhhHHHHHHHHHHHHhcCCCCCChHHHHHHHHHH
Q 018699          278 -GGLVY--LPKLSFKRYWKVELWKSLFTNLLNMSSGNDKEVLQNLQKSF  323 (351)
Q Consensus       278 -~~~~~--~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~~~~  323 (351)
                       .....  ..+...+...+ +++++||.+||++||++|||+.|+|+|||
T Consensus       221 ~~~~i~~~~~~~~~~~~~~-~~~~~li~~~l~~dp~~R~s~~ell~Hp~  268 (270)
T d1t4ha_         221 IYRRVTSGVKPASFDKVAI-PEVKEIIEGCIRQNKDERYSIKDLLNHAF  268 (270)
T ss_dssp             HHHHHTTTCCCGGGGGCCC-HHHHHHHHHHSCSSGGGSCCHHHHHTSGG
T ss_pred             HHHHHHcCCCCcccCccCC-HHHHHHHHHHccCCHhHCcCHHHHhCCcc
Confidence             00000  11223333344 78999999999999999999999999987

>d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine protein kinase TAO2
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=100.00  E-value=3.8e-52  Score=370.48  Aligned_cols=249  Identities=17%  Similarity=0.095  Sum_probs=200.4

Q ss_pred             eeEEEEEEeeccCceEEEEEEecCCCCceEEEEecCCCCChHHHHHHHH---HhhhccccccccccceeeecccCeeEEE
Q 018699           48 KKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFPWEFYMYRQL---DQRISGRERSSFGFAHRIHLYSDYSILV  124 (351)
Q Consensus        48 ~~Y~i~~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~~~e~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~lv  124 (351)
                      .+|++.++||+|+||+||+|+ +..+|+.||||++.............+   ...+....|++++.+..++..++..|+|
T Consensus        15 ~~y~~l~~lG~G~fg~Vy~a~-~~~~~~~vAvK~i~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~iv   93 (309)
T d1u5ra_          15 KLFSDLREIGHGSFGAVYFAR-DVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLV   93 (309)
T ss_dssp             HHEEEEEEEEECSSSEEEEEE-ETTTTEEEEEEEEECCSSCHHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEE
T ss_pred             HhcEeeEEEecCCCeEEEEEE-ECCCCcEEEEEEEchhhccCHHHHHHHHHHHHHHHHCCCCCEeeEEEEEEECCEEEEE
Confidence            469999999999999999999 578899999999876654333322222   2334566789999999999889999999


Q ss_pred             EEecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeeccCCCCCcccC
Q 018699          125 CDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSGPWQDQ  204 (351)
Q Consensus       125 ~e~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~~~~~~~~~  204 (351)
                      ||||.+|+|..++..    +..+++..++.++.||+.||.|||++||+||||||+||+++                 .++
T Consensus        94 ~E~~~~g~l~~~~~~----~~~l~e~~~~~i~~qi~~aL~yLH~~~iiHrDiKp~NILl~-----------------~~~  152 (309)
T d1u5ra_          94 MEYCLGSASDLLEVH----KKPLQEVEIAAVTHGALQGLAYLHSHNMIHRDVKAGNILLS-----------------EPG  152 (309)
T ss_dssp             EECCSEEHHHHHHHH----TSCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCSGGGEEEE-----------------TTT
T ss_pred             EEecCCCchHHHHHh----CCCCCHHHHHHHHHHHHHHHHHHHhCCEeccCCCcceEEEC-----------------CCC
Confidence            999999988776665    57899999999999999999999999999999999999999                 778


Q ss_pred             CeEEeecCCccccccCCCCccccccccCCCcccceeccC---CCCCccchHhHHHHHHHHHHhCccccccccCCCCCcee
Q 018699          205 GLCLVDWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQEK---KPWKFQVDTYGLCAIVHMMLHNSYMEIEKKASPDGGLV  281 (351)
Q Consensus       205 ~~~l~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~---~~~~~~~DiwslG~il~~l~~g~~p~~~~~~~~~~~~~  281 (351)
                      .+||+|||+|....      ......||+.|+|||++.+   ..|+.++|||||||++|+|++|..||............
T Consensus       153 ~~Kl~DFG~a~~~~------~~~~~~GT~~Y~APE~~~~~~~~~y~~~~DiwSlGvilyel~~g~~Pf~~~~~~~~~~~i  226 (309)
T d1u5ra_         153 LVKLGDFGSASIMA------PANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHI  226 (309)
T ss_dssp             EEEECCCTTCBSSS------SBCCCCSCGGGCCHHHHTTTTSCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHH
T ss_pred             CEEEeecccccccC------CCCccccCccccCHHHHhccCCCCcCchhhhhhHHHHHHHHHHCCCCCCCCCHHHHHHHH
Confidence            89999999986532      2234579999999999854   45889999999999999999999999754332100000


Q ss_pred             --eecCcchhhhhHHHHHHHHHHHHhcCCCCCChHHHHHHHHHHHH
Q 018699          282 --YLPKLSFKRYWKVELWKSLFTNLLNMSSGNDKEVLQNLQKSFQD  325 (351)
Q Consensus       282 --~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~~~~~~  325 (351)
                        ...+...+..++ +.+++||.+||++||++|||+.|+|+|||..
T Consensus       227 ~~~~~~~~~~~~~s-~~~~~li~~~L~~dP~~Rpt~~ell~Hp~~~  271 (309)
T d1u5ra_         227 AQNESPALQSGHWS-EYFRNFVDSCLQKIPQDRPTSEVLLKHRFVL  271 (309)
T ss_dssp             HHSCCCCCSCTTSC-HHHHHHHHHHTCSSGGGSCCHHHHTTCHHHH
T ss_pred             HhCCCCCCCCCCCC-HHHHHHHHHHCcCChhHCcCHHHHHhCHHhc
Confidence              011111223345 8899999999999999999999999999854

>d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]

Probab=100.00  E-value=1e-52  Score=380.55  Aligned_cols=254  Identities=19%  Similarity=0.224  Sum_probs=206.6

Q ss_pred             eeEEEEEEeeccCceEEEEEEecCCCCceEEEEecCCCCChHHHHHHHHHhhhccccccccccceeeecccCeeEEEEEe
Q 018699           48 KKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFPWEFYMYRQLDQRISGRERSSFGFAHRIHLYSDYSILVCDY  127 (351)
Q Consensus        48 ~~Y~i~~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~  127 (351)
                      ++|++.+.||+|+||+||+|+ +..+|+.||||++......+..........+....|++++.+..++..++.+|+||||
T Consensus        29 d~Y~i~~~lG~G~fg~V~~a~-~~~~~~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~ivmE~  107 (352)
T d1koba_          29 DYYDILEELGSGAFGVVHRCV-EKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDAFEDKYEMVLILEF  107 (352)
T ss_dssp             GTEEEEEEEEEETTEEEEEEE-ETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCSTTBCCEEEEEECSSEEEEEEEC
T ss_pred             cceEEEEEEecCCCeEEEEEE-ECCCCCEEEEEEECCcchhHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEEc
Confidence            579999999999999999999 5678999999998876544433333333445566889999999999999999999999


Q ss_pred             cCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeeccCCCCCcccCCeE
Q 018699          128 LSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSGPWQDQGLC  207 (351)
Q Consensus       128 ~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~~~~~~~~~~~~  207 (351)
                      |+||+|.+.+...   +.++++..++.++.||+.||+|||++||+||||||+||+++..               .++.+|
T Consensus       108 ~~gg~L~~~~~~~---~~~l~e~~~~~i~~qi~~aL~ylH~~~iiHRDiKp~NILl~~~---------------~~~~vk  169 (352)
T d1koba_         108 LSGGELFDRIAAE---DYKMSEAEVINYMRQACEGLKHMHEHSIVHLDIKPENIMCETK---------------KASSVK  169 (352)
T ss_dssp             CCCCBHHHHTTCT---TCCBCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESST---------------TCCCEE
T ss_pred             CCCChHHHHHHhc---CCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccccccccccccc---------------CCCeEE
Confidence            9999999887653   4579999999999999999999999999999999999999732               346799


Q ss_pred             EeecCCccccccCCCCccccccccCCCcccceeccCCCCCccchHhHHHHHHHHHHhCccccccccCCCCCcee----ee
Q 018699          208 LVDWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQEKKPWKFQVDTYGLCAIVHMMLHNSYMEIEKKASPDGGLV----YL  283 (351)
Q Consensus       208 l~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~p~~~~~~~~~~~~~----~~  283 (351)
                      |+|||+|....   .........||+.|+|||++.+..++.++|||||||++|+|++|..||...........+    ..
T Consensus       170 L~DFGla~~~~---~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~~~~~i~~~~~~  246 (352)
T d1koba_         170 IIDFGLATKLN---PDEIVKVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGEDDLETLQNVKRCDWE  246 (352)
T ss_dssp             ECCCTTCEECC---TTSCEEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHHCCCC
T ss_pred             EeecccceecC---CCCceeeccCcccccCHHHHcCCCCCCccchHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCC
Confidence            99999997543   233445667999999999999999999999999999999999999999754432110001    11


Q ss_pred             cCcchhhhhHHHHHHHHHHHHhcCCCCCChHHHHHHHHHHH
Q 018699          284 PKLSFKRYWKVELWKSLFTNLLNMSSGNDKEVLQNLQKSFQ  324 (351)
Q Consensus       284 ~~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~~~~~  324 (351)
                      .+......++ +.+++||.+||++||.+|||+.|+|+|||.
T Consensus       247 ~~~~~~~~~s-~~~~~li~~~L~~dp~~R~s~~eil~Hp~~  286 (352)
T d1koba_         247 FDEDAFSSVS-PEAKDFIKNLLQKEPRKRLTVHDALEHPWL  286 (352)
T ss_dssp             CCSSTTTTSC-HHHHHHHHTTSCSSGGGSCCHHHHHTSTTT
T ss_pred             CCcccccCCC-HHHHHHHHHHccCChhHCcCHHHHhcCHhh
Confidence            1222223344 889999999999999999999999999874

>d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=100.00  E-value=2.8e-52  Score=372.67  Aligned_cols=249  Identities=17%  Similarity=0.223  Sum_probs=205.2

Q ss_pred             eeEEEEEEeeccCceEEEEEEecCCCCceEEEEecCCCCCh---HHHHHHHHHhhhccccccccccceeeecccCeeEEE
Q 018699           48 KKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFPW---EFYMYRQLDQRISGRERSSFGFAHRIHLYSDYSILV  124 (351)
Q Consensus        48 ~~Y~i~~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~~~---e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv  124 (351)
                      ++|++.+.||+|+||+||+|+ +..+|+.||||++.+....   ....+......+....|++++.+..++..++.+|+|
T Consensus         4 ~dy~i~~~lG~G~fg~Vy~a~-~~~~g~~vAvK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~iv   82 (316)
T d1fota_           4 QDFQILRTLGTGSFGRVHLIR-SRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWGTFQDAQQIFMI   82 (316)
T ss_dssp             GGEEEEEEEEECSSCEEEEEE-ETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCBTTBCCEEEEEECSSEEEEE
T ss_pred             hHeEEEEEEecCcCcEEEEEE-ECCCCCEEEEEEEchHHccCHHHHHHHHHHHHHHHhccCcChhheeeeEeeCCeeeeE
Confidence            579999999999999999999 5788999999998643211   122222233344566889999999999999999999


Q ss_pred             EEecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeeccCCCCCcccC
Q 018699          125 CDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSGPWQDQ  204 (351)
Q Consensus       125 ~e~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~~~~~~~~~  204 (351)
                      |||++||+|..++..    +..+++..++.++.||+.|+.|||++||+||||||+||+++                 .++
T Consensus        83 mE~~~gg~l~~~~~~----~~~~~~~~~~~~~~qi~~al~~lH~~~iiHrDiKp~NILl~-----------------~~g  141 (316)
T d1fota_          83 MDYIEGGELFSLLRK----SQRFPNPVAKFYAAEVCLALEYLHSKDIIYRDLKPENILLD-----------------KNG  141 (316)
T ss_dssp             ECCCCSCBHHHHHHH----TSSCCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEEC-----------------TTS
T ss_pred             eeecCCccccccccc----cccccccHHHHHHHHHHHhhhhhccCcEEccccCchheeEc-----------------CCC
Confidence            999999999999887    57889999999999999999999999999999999999999                 788


Q ss_pred             CeEEeecCCccccccCCCCccccccccCCCcccceeccCCCCCccchHhHHHHHHHHHHhCccccccccCCCCCceeeec
Q 018699          205 GLCLVDWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQEKKPWKFQVDTYGLCAIVHMMLHNSYMEIEKKASPDGGLVYLP  284 (351)
Q Consensus       205 ~~~l~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~p~~~~~~~~~~~~~~~~  284 (351)
                      .+||+|||+|....     ......+||+.|+|||++.+..|+.++|||||||++|+|++|..||...+.......+...
T Consensus       142 ~vkL~DFG~a~~~~-----~~~~~~~Gt~~Y~APE~l~~~~y~~~~DiwSlGvilyemltG~~Pf~~~~~~~~~~~i~~~  216 (316)
T d1fota_         142 HIKITDFGFAKYVP-----DVTYTLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDSNTMKTYEKILNA  216 (316)
T ss_dssp             CEEECCCSSCEECS-----SCBCCCCSCTTTCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHHC
T ss_pred             CEEEecCccceEec-----cccccccCcccccCHHHHcCCCCCchhhccccchhHHHHHhCCCCCCCcCHHHHHHHHHcC
Confidence            89999999997543     2234568999999999999999999999999999999999999999765432111112223


Q ss_pred             CcchhhhhHHHHHHHHHHHHhcCCCCCCh-----HHHHHHHHHHH
Q 018699          285 KLSFKRYWKVELWKSLFTNLLNMSSGNDK-----EVLQNLQKSFQ  324 (351)
Q Consensus       285 ~~~~~~~~~~~~~~~li~~~L~~dP~~R~-----s~~e~l~~~~~  324 (351)
                      ...+|..++ +.++++|.+||.+||.+|+     +++++++|||.
T Consensus       217 ~~~~p~~~s-~~~~~li~~~L~~dp~~R~~~~r~t~~~il~Hp~f  260 (316)
T d1fota_         217 ELRFPPFFN-EDVKDLLSRLITRDLSQRLGNLQNGTEDVKNHPWF  260 (316)
T ss_dssp             CCCCCTTSC-HHHHHHHHHHTCSCTTTCTTSSTTTTHHHHTSGGG
T ss_pred             CCCCCCCCC-HHHHHHHHHHhhhCHHhccccchhhHHHHHcCccc
Confidence            334445555 8899999999999999996     89999999873

>d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Death-associated protein kinase, Dap
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=7.3e-52  Score=367.05  Aligned_cols=257  Identities=18%  Similarity=0.173  Sum_probs=203.9

Q ss_pred             CeeEEEEEEeeccCceEEEEEEecCCCCceEEEEecCCCCCh------HHHHHHHHHhhhccccccccccceeeecccCe
Q 018699           47 GKKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFPW------EFYMYRQLDQRISGRERSSFGFAHRIHLYSDY  120 (351)
Q Consensus        47 ~~~Y~i~~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~~~------e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  120 (351)
                      .++|++.+.||+|+||+||+|+ +..+|+.||||++.+....      ..+.+......+....|++++....++...+.
T Consensus         9 ~d~Y~~~~~lG~G~fg~Vy~~~-~~~~~~~~AvK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~   87 (293)
T d1jksa_           9 DDYYDTGEELGSGQFAVVKKCR-EKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTD   87 (293)
T ss_dssp             GGTEEEEEEEEECSSEEEEEEE-ETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSE
T ss_pred             ccCEEEeEEEecCCCeEEEEEE-ECCCCCEEEEEEEEhhhcchhhhhHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCE
Confidence            4689999999999999999999 5788999999998643211      11222222223344578999999999999999


Q ss_pred             eEEEEEecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeeccCCCCC
Q 018699          121 SILVCDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSGP  200 (351)
Q Consensus       121 ~~lv~e~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~~~~~  200 (351)
                      +|+|||||+||+|.+++...    ..+++..++.++.|++.||+|||++||+||||||+||+++.++.            
T Consensus        88 ~~iv~E~~~gg~L~~~i~~~----~~l~~~~~~~~~~qi~~al~yLH~~~ivHrDiKp~Nill~~~~~------------  151 (293)
T d1jksa_          88 VILILELVAGGELFDFLAEK----ESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNV------------  151 (293)
T ss_dssp             EEEEEECCCSCBHHHHHHHH----SSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESCSSS------------
T ss_pred             EEEEEEcCCCccccchhccc----cccchhHHHHHHHHHHHHHHhhhhcceeecccccceEEEecCCC------------
Confidence            99999999999999999873    68999999999999999999999999999999999999984432            


Q ss_pred             cccCCeEEeecCCccccccCCCCccccccccCCCcccceeccCCCCCccchHhHHHHHHHHHHhCccccccccCCCCCce
Q 018699          201 WQDQGLCLVDWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQEKKPWKFQVDTYGLCAIVHMMLHNSYMEIEKKASPDGGL  280 (351)
Q Consensus       201 ~~~~~~~l~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~p~~~~~~~~~~~~  280 (351)
                       ....+||+|||++....   .........||+.|+|||++.+..++.++||||+||++|+|++|..||...+.......
T Consensus       152 -~~~~vkl~DfG~a~~~~---~~~~~~~~~~t~~y~APE~~~~~~~~~~~DiwSlGvilyell~g~~Pf~~~~~~~~~~~  227 (293)
T d1jksa_         152 -PKPRIKIIDFGLAHKID---FGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLAN  227 (293)
T ss_dssp             -SSCCEEECCCTTCEECT---TSCBCSCCCCCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHH
T ss_pred             -cccceEecchhhhhhcC---CCccccccCCCCcccCHHHHcCCCCCCcccchhhhHHHHHHHcCCCCCCCCCHHHHHHH
Confidence             33469999999986543   23334556789999999999999999999999999999999999999976543211000


Q ss_pred             e----eecCcchhhhhHHHHHHHHHHHHhcCCCCCChHHHHHHHHHHHH
Q 018699          281 V----YLPKLSFKRYWKVELWKSLFTNLLNMSSGNDKEVLQNLQKSFQD  325 (351)
Q Consensus       281 ~----~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~~~~~~  325 (351)
                      +    .......+...+ +.+++||.+||++||++|||+.|+++|||..
T Consensus       228 i~~~~~~~~~~~~~~~s-~~~~~li~~~L~~dP~~R~s~~eil~hp~~~  275 (293)
T d1jksa_         228 VSAVNYEFEDEYFSNTS-ALAKDFIRRLLVKDPKKRMTIQDSLQHPWIK  275 (293)
T ss_dssp             HHTTCCCCCHHHHTTSC-HHHHHHHHTTSCSSGGGSCCHHHHHHSTTTC
T ss_pred             HHhcCCCCCchhcCCCC-HHHHHHHHHHccCChhHCcCHHHHhcCcccC
Confidence            0    111222223344 7899999999999999999999999998743

>d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: G-protein coupled receptor kinase 2
species: Cow (Bos taurus) [TaxId: 9913]

Probab=100.00  E-value=1.5e-51  Score=374.76  Aligned_cols=251  Identities=16%  Similarity=0.220  Sum_probs=203.2

Q ss_pred             CeeEEEEEEeeccCceEEEEEEecCCCCceEEEEecCCCCC----hHHHH--HHHHHhhhccccccccccceeeecccCe
Q 018699           47 GKKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFP----WEFYM--YRQLDQRISGRERSSFGFAHRIHLYSDY  120 (351)
Q Consensus        47 ~~~Y~i~~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~~----~e~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~  120 (351)
                      -++|++.+.||+|+||+||+|+ +..+|+.||||++.+...    .+...  ...+...+....|++++.+..++...+.
T Consensus         3 lddy~i~~~lG~G~fg~Vy~~~-~~~t~~~vAiK~i~~~~~~~~~~~~~~~~e~~~~~~l~~~~hpnIv~l~~~~~~~~~   81 (364)
T d1omwa3           3 MNDFSVHRIIGRGGFGEVYGCR-KADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDK   81 (364)
T ss_dssp             STTEEEEEEEEECSSCEEEEEE-ETTTCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHHHHSSSCCTTBCCEEEEEECSSE
T ss_pred             HHhCeeeeEEecCCCeEEEEEE-ECCCCCEEEEEEEchHHcchhhHHHHHHHHHHHHHHHhcCCCCcEEEEEEEEEECCE
Confidence            3579999999999999999999 578899999999864311    11111  1222333455678899999999888999


Q ss_pred             eEEEEEecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeeccCCCCC
Q 018699          121 SILVCDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSGP  200 (351)
Q Consensus       121 ~~lv~e~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~~~~~  200 (351)
                      +|+||||++||+|.+++..    +..+++..++.++.||+.||.|||++||+||||||+||+++                
T Consensus        82 ~~ivmE~~~gg~L~~~l~~----~~~~~e~~~~~~~~qi~~aL~ylH~~~iiHrDlKP~NILl~----------------  141 (364)
T d1omwa3          82 LSFILDLMNGGDLHYHLSQ----HGVFSEADMRFYAAEIILGLEHMHNRFVVYRDLKPANILLD----------------  141 (364)
T ss_dssp             EEEEECCCCSCBHHHHHHH----HCSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEC----------------
T ss_pred             EEEEEEecCCCcHHHHHHh----cccccHHHHHHHHHHHHHHHHHHHHCCccceeeccceeEEc----------------
Confidence            9999999999999999987    36789999999999999999999999999999999999999                


Q ss_pred             cccCCeEEeecCCccccccCCCCccccccccCCCcccceecc-CCCCCccchHhHHHHHHHHHHhCccccccccCCCCC-
Q 018699          201 WQDQGLCLVDWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQE-KKPWKFQVDTYGLCAIVHMMLHNSYMEIEKKASPDG-  278 (351)
Q Consensus       201 ~~~~~~~l~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~-~~~~~~~~DiwslG~il~~l~~g~~p~~~~~~~~~~-  278 (351)
                       .++.+||+|||+|....    ........||+.|+|||++. +..|+.++|||||||++|+|++|..||......... 
T Consensus       142 -~~g~iKl~DFGla~~~~----~~~~~~~~GT~~y~APE~~~~~~~~~~~~DiwSlGvilyemltG~~Pf~~~~~~~~~~  216 (364)
T d1omwa3         142 -EHGHVRISDLGLACDFS----KKKPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHE  216 (364)
T ss_dssp             -SSSCEEECCCTTCEECS----SSCCCSCCSCGGGCCHHHHSTTCCCCTHHHHHHHHHHHHHHHHSSCSSCSSCSSCHHH
T ss_pred             -CCCcEEEeeeceeeecC----CCcccccccccccchhHHhhcCCCCCcccchhHHHHHHHHHHhCCCCCCCCCHHHHHH
Confidence             77889999999997543    22344567999999999986 466899999999999999999999999765433111 


Q ss_pred             --ceeeecCcchhhhhHHHHHHHHHHHHhcCCCCCChH-----HHHHHHHHHH
Q 018699          279 --GLVYLPKLSFKRYWKVELWKSLFTNLLNMSSGNDKE-----VLQNLQKSFQ  324 (351)
Q Consensus       279 --~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~s-----~~e~l~~~~~  324 (351)
                        ..........+..++ +.+++||.+||++||++|||     +.|+++|||.
T Consensus       217 ~~~~~~~~~~~~~~~~s-~~~~~li~~~L~~dP~~R~t~~~~~a~eil~Hp~f  268 (364)
T d1omwa3         217 IDRMTLTMAVELPDSFS-PELRSLLEGLLQRDVNRRLGCLGRGAQEVKESPFF  268 (364)
T ss_dssp             HHHHSSSCCCCCCSSSC-HHHHHHHHHHTCSSTTTSTTTSSSTHHHHHTSGGG
T ss_pred             HHHhcccCCCCCCCCCC-HHHHHHHHHHcccCHHHhCCCcccCHHHHHcCccc
Confidence              111223334444555 88999999999999999999     7999999873

>d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase C, theta type
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3.1e-52  Score=373.02  Aligned_cols=252  Identities=19%  Similarity=0.212  Sum_probs=205.5

Q ss_pred             eeEEEEEEeeccCceEEEEEEecCCCCceEEEEecCCCCC---hH-HHHHHHHHhhhccccccccccceeeecccCeeEE
Q 018699           48 KKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFP---WE-FYMYRQLDQRISGRERSSFGFAHRIHLYSDYSIL  123 (351)
Q Consensus        48 ~~Y~i~~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~~---~e-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  123 (351)
                      ++|++.+.||+|+||+||+|+ +..+|+.||||++.+...   .+ ...+.+.........|++++....++..++.+|+
T Consensus         2 ddy~i~~~iG~G~fg~Vy~~~-~~~t~~~vAvK~i~k~~~~~~~~~~~~~~e~~~l~~~~~hp~Iv~~~~~~~~~~~~yi   80 (320)
T d1xjda_           2 EDFILHKMLGKGSFGKVFLAE-FKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKENLFF   80 (320)
T ss_dssp             TTEEEEEEEEECSSSEEEEEE-ETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEEE
T ss_pred             CCeEEeeEEecCCCcEEEEEE-ECCCCCEEEEEEEchhhccChHHHHHHHHHHHHHHHhCCCCcEEEEEEEEccCCceeE
Confidence            479999999999999999999 578899999999864311   11 1122222222234678999999999999999999


Q ss_pred             EEEecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeeccCCCCCccc
Q 018699          124 VCDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSGPWQD  203 (351)
Q Consensus       124 v~e~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~~~~~~~~  203 (351)
                      ||||+++|+|.+++..    +..+++..++.++.||+.||.|||++||+||||||+||+++                 .+
T Consensus        81 vmEy~~~g~L~~~i~~----~~~~~e~~~~~~~~qi~~al~ylH~~~iiHrDikp~NiL~~-----------------~~  139 (320)
T d1xjda_          81 VMEYLNGGDLMYHIQS----CHKFDLSRATFYAAEIILGLQFLHSKGIVYRDLKLDNILLD-----------------KD  139 (320)
T ss_dssp             EEECCTTCBHHHHHHH----HSSCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEEC-----------------TT
T ss_pred             EEeecCCCcHHHHhhc----cCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCcccceeec-----------------CC
Confidence            9999999999999987    46799999999999999999999999999999999999999                 77


Q ss_pred             CCeEEeecCCccccccCCCCccccccccCCCcccceeccCCCCCccchHhHHHHHHHHHHhCccccccccCCCCCceeee
Q 018699          204 QGLCLVDWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQEKKPWKFQVDTYGLCAIVHMMLHNSYMEIEKKASPDGGLVYL  283 (351)
Q Consensus       204 ~~~~l~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~p~~~~~~~~~~~~~~~  283 (351)
                      +.+||+|||++.....  .........||+.|+|||++.+..++.++|||||||++|+|++|+.||...+.......+..
T Consensus       140 ~~~kl~DFG~a~~~~~--~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvilyemltG~~PF~~~~~~~~~~~i~~  217 (320)
T d1xjda_         140 GHIKIADFGMCKENML--GDAKTNTFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEELFHSIRM  217 (320)
T ss_dssp             SCEEECCCTTCBCCCC--TTCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHH
T ss_pred             Cceeccccchhhhccc--ccccccccCCCCCcCCHHHHcCCCCCchhhhhhhhHHHHHHHhCCCCCCCCCHHHHHHHHHc
Confidence            8899999999975432  23334556899999999999999999999999999999999999999976544321111223


Q ss_pred             cCcchhhhhHHHHHHHHHHHHhcCCCCCChHHH-HHHHHHHH
Q 018699          284 PKLSFKRYWKVELWKSLFTNLLNMSSGNDKEVL-QNLQKSFQ  324 (351)
Q Consensus       284 ~~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~-e~l~~~~~  324 (351)
                      ....+|...+ +.+++||.+||++||.+||++. ++++|||.
T Consensus       218 ~~~~~p~~~s-~~~~dli~~~L~~dP~~R~s~~~~l~~hpff  258 (320)
T d1xjda_         218 DNPFYPRWLE-KEAKDLLVKLFVREPEKRLGVRGDIRQHPLF  258 (320)
T ss_dssp             CCCCCCTTSC-HHHHHHHHHHSCSSGGGSBTTBSCGGGSGGG
T ss_pred             CCCCCCccCC-HHHHHHHHHhcccCCCCCcCHHHHHHhCchh
Confidence            3344555556 8899999999999999999995 78899873

>d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase activated protein kinase 2, mapkap2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.3e-50  Score=363.17  Aligned_cols=252  Identities=18%  Similarity=0.214  Sum_probs=198.3

Q ss_pred             eeEEEEE-EeeccCceEEEEEEecCCCCceEEEEecCCCCChHHHHHHHHHhhhccccccccccceeeecc----cCeeE
Q 018699           48 KKYQIKG-CAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFPWEFYMYRQLDQRISGRERSSFGFAHRIHLY----SDYSI  122 (351)
Q Consensus        48 ~~Y~i~~-~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~  122 (351)
                      ++|++.. .||+|+||+||+|+ +..+++.||||++....    ...+++........|++++.+..++..    ...+|
T Consensus        11 ~~y~i~~~~lG~G~fg~Vy~a~-~~~~~~~vAiK~i~~~~----~~~~E~~~~~~~~~hpnIv~l~~~~~~~~~~~~~~~   85 (335)
T d2ozaa1          11 DDYKVTSQVLGLGINGKVLQIF-NKRTQEKFALKMLQDCP----KARREVELHWRASQCPHIVRIVDVYENLYAGRKCLL   85 (335)
T ss_dssp             GTEEEEEEEEEECSSCEEEEEE-ETTTCCEEEEEEEECSH----HHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEE
T ss_pred             cCEEEeeEEeeeccCeEEEEEE-ECCCCCEEEEEEECCcH----HHHHHHHHHHHhcCCCCCCeEEEEEeecccCCCEEE
Confidence            5798875 59999999999999 56788999999986532    222333322234468888888777643    56789


Q ss_pred             EEEEecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeeccCCCCCcc
Q 018699          123 LVCDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSGPWQ  202 (351)
Q Consensus       123 lv~e~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~~~~~~~  202 (351)
                      +|||||+||+|.+++....  +..+++..++.++.||+.||+|||++||+||||||+||+++..+              .
T Consensus        86 ivmEy~~gg~L~~~i~~~~--~~~l~e~~~~~i~~qi~~al~ylH~~~iiHRDiKp~NIll~~~~--------------~  149 (335)
T d2ozaa1          86 IVMECLDGGELFSRIQDRG--DQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKR--------------P  149 (335)
T ss_dssp             EEEECCCSEEHHHHHHSCS--CCCEEHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESCSS--------------T
T ss_pred             EEEECCCCCcHHHHHHhcC--CCCcCHHHHHHHHHHHHHHHHHHHHcCCcccccccccccccccc--------------c
Confidence            9999999999999997632  35799999999999999999999999999999999999998433              3


Q ss_pred             cCCeEEeecCCccccccCCCCccccccccCCCcccceeccCCCCCccchHhHHHHHHHHHHhCccccccccCCCCCc---
Q 018699          203 DQGLCLVDWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQEKKPWKFQVDTYGLCAIVHMMLHNSYMEIEKKASPDGG---  279 (351)
Q Consensus       203 ~~~~~l~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~p~~~~~~~~~~~---  279 (351)
                      .+.+||+|||+|....   .........||+.|+|||++.+..|+.++|||||||++|+|++|.+||..........   
T Consensus       150 ~~~~Kl~DFG~a~~~~---~~~~~~~~~gt~~y~aPE~~~~~~y~~~~DiwSlGvily~lltg~~Pf~~~~~~~~~~~~~  226 (335)
T d2ozaa1         150 NAILKLTDFGFAKETT---SHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMK  226 (335)
T ss_dssp             TCCEEECCCTTCEECC---CCCCCCCCSCCCSSCCCCCCCGGGGSHHHHHHHHHHHHHHHTTSSCSCEETTCC-------
T ss_pred             cccccccccceeeecc---CCCccccccCCcccCCcHHHcCCCCCHHHHHHhhchhHHHHhhCCCCCCCCCHHHHHHHHH
Confidence            5679999999997543   2333455689999999999999999999999999999999999999998765432111   


Q ss_pred             -eeeecCcchh----hhhHHHHHHHHHHHHhcCCCCCChHHHHHHHHHHH
Q 018699          280 -LVYLPKLSFK----RYWKVELWKSLFTNLLNMSSGNDKEVLQNLQKSFQ  324 (351)
Q Consensus       280 -~~~~~~~~~~----~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~~~~~  324 (351)
                       ........+|    ..++ +.+++||.+||++||++|||+.|++.|||.
T Consensus       227 ~~i~~~~~~~~~~~~~~~s-~~~~~li~~~L~~dP~~R~s~~eil~hp~~  275 (335)
T d2ozaa1         227 TRIRMGQYEFPNPEWSEVS-EEVKMLIRNLLKTEPTQRMTITEFMNHPWI  275 (335)
T ss_dssp             -CCCSCSSSCCTTHHHHSC-HHHHHHHHHHSCSSTTTSCCHHHHHHSHHH
T ss_pred             HHHhcCCCCCCCcccccCC-HHHHHHHHHHccCChhHCcCHHHHHcCHHh
Confidence             1111111122    2344 789999999999999999999999999874

>d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=100.00  E-value=1.2e-51  Score=373.42  Aligned_cols=249  Identities=17%  Similarity=0.167  Sum_probs=204.3

Q ss_pred             eeEEEEEEeeccCceEEEEEEecCCCCceEEEEecCCCCCh---HHHHHHHHHhhhccccccccccceeeecccCeeEEE
Q 018699           48 KKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFPW---EFYMYRQLDQRISGRERSSFGFAHRIHLYSDYSILV  124 (351)
Q Consensus        48 ~~Y~i~~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~~~---e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv  124 (351)
                      ++|++++.||+|+||+||+|+ +..+|+.||||++.+....   ....+......+....|++++....++...+..++|
T Consensus        41 d~y~i~~~lG~G~fg~Vy~a~-~~~~g~~~AvK~i~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~~v  119 (350)
T d1rdqe_          41 DQFDRIKTLGTGSFGRVMLVK-HKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMV  119 (350)
T ss_dssp             GGEEEEEEEEECSSCEEEEEE-ETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred             cCeEEEEEeecCcCcEEEEEE-ECCCCCEEEEEEEchHHccCHHHHHHHHHHHHHHHHcCCCcEeecccccccccccccc
Confidence            689999999999999999999 5778999999998643211   111122222334556789999999999889999999


Q ss_pred             EEecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeeccCCCCCcccC
Q 018699          125 CDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSGPWQDQ  204 (351)
Q Consensus       125 ~e~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~~~~~~~~~  204 (351)
                      |||+.+|+|..++...    +.+++..++.++.||+.||.|||++||+||||||+||+++                 .++
T Consensus       120 ~e~~~~g~l~~~l~~~----~~l~e~~~~~i~~qi~~aL~yLH~~~iiHRDIKP~NILl~-----------------~~g  178 (350)
T d1rdqe_         120 MEYVAGGEMFSHLRRI----GRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLID-----------------QQG  178 (350)
T ss_dssp             EECCTTCBHHHHHHHH----CCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEC-----------------TTS
T ss_pred             cccccccchhhhHhhc----CCCCHHHHHHHHHHHHHHHHHHHhCCEecCcCCHHHcccC-----------------CCC
Confidence            9999999999999873    6899999999999999999999999999999999999999                 778


Q ss_pred             CeEEeecCCccccccCCCCccccccccCCCcccceeccCCCCCccchHhHHHHHHHHHHhCccccccccCCCCCceeeec
Q 018699          205 GLCLVDWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQEKKPWKFQVDTYGLCAIVHMMLHNSYMEIEKKASPDGGLVYLP  284 (351)
Q Consensus       205 ~~~l~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~p~~~~~~~~~~~~~~~~  284 (351)
                      .+||+|||+|....     .......||+.|+|||++.+..++.++|||||||++|+|++|..||...+.......+...
T Consensus       179 ~ikL~DFG~a~~~~-----~~~~~~~Gt~~Y~APE~~~~~~~~~~~DiwSlGvilyemltG~~Pf~~~~~~~~~~~i~~~  253 (350)
T d1rdqe_         179 YIQVTDFGFAKRVK-----GRTWTLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSG  253 (350)
T ss_dssp             CEEECCCTTCEECS-----SCBCCCEECGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHC
T ss_pred             CEEeeeceeeeecc-----cccccccCccccCCHHHHcCCCCCccccccchhHHHHHHHhCCCCCCCcCHHHHHHHHhcC
Confidence            89999999997643     2234567999999999999999999999999999999999999999765432111112223


Q ss_pred             CcchhhhhHHHHHHHHHHHHhcCCCCCCh-----HHHHHHHHHHH
Q 018699          285 KLSFKRYWKVELWKSLFTNLLNMSSGNDK-----EVLQNLQKSFQ  324 (351)
Q Consensus       285 ~~~~~~~~~~~~~~~li~~~L~~dP~~R~-----s~~e~l~~~~~  324 (351)
                      ....+..++ +.+.+||++||++||.+|+     ++.++++|||.
T Consensus       254 ~~~~p~~~s-~~~~~li~~~L~~dP~kR~~~~r~t~~ell~Hp~f  297 (350)
T d1rdqe_         254 KVRFPSHFS-SDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWF  297 (350)
T ss_dssp             CCCCCTTCC-HHHHHHHHHHSCSCTTTCTTSSTTTTHHHHTSGGG
T ss_pred             CCCCCccCC-HHHHHHHHHHhhhCHHhccccccccHHHHHcCccc
Confidence            334445556 8899999999999999995     89999999863

>d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Titin, kinase domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.9e-51  Score=368.27  Aligned_cols=255  Identities=14%  Similarity=0.175  Sum_probs=206.0

Q ss_pred             CeeEEEEEEeeccCceEEEEEEecCCCCceEEEEecCCCCChHHHHHHHHHhhhccccccccccceeeecccCeeEEEEE
Q 018699           47 GKKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFPWEFYMYRQLDQRISGRERSSFGFAHRIHLYSDYSILVCD  126 (351)
Q Consensus        47 ~~~Y~i~~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e  126 (351)
                      -++|++.+.||+|+||+||+|. +..+|+.||||++...........+++ ..+....|++++.+..++..++.+|+|||
T Consensus         4 ~~rY~i~~~lG~G~fg~Vy~~~-~~~~~~~~AiK~i~~~~~~~~~~~~Ei-~il~~l~HpnIv~~~~~~~~~~~~~lvmE   81 (321)
T d1tkia_           4 YEKYMIAEDLGRGEFGIVHRCV-ETSSKKTYMAKFVKVKGTDQVLVKKEI-SILNIARHRNILHLHESFESMEELVMIFE   81 (321)
T ss_dssp             TTTEEEEEEEEECSSEEEEEEE-ETTTTEEEEEEEECCCTHHHHHHHHHH-HHHHHSCCTTBCCEEEEEEETTEEEEEEC
T ss_pred             ccceEEEEEEecCCCeEEEEEE-ECCCCcEEEEEEEcCCcccHHHHHHHH-HHHHhCCCCCCCeEEEEEEECCEEEEEEe
Confidence            3689999999999999999999 577899999999987654333333332 33455678999999999999999999999


Q ss_pred             ecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeeccCCCCCcccCCe
Q 018699          127 YLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSGPWQDQGL  206 (351)
Q Consensus       127 ~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~~~~~~~~~~~  206 (351)
                      ||+||+|.+++...   +..+++..++.++.||+.||.|||++||+||||||+||+++.+               ....+
T Consensus        82 ~~~gg~L~~~i~~~---~~~l~e~~~~~i~~qi~~al~yLH~~~iiHrDlKp~NIll~~~---------------~~~~i  143 (321)
T d1tkia_          82 FISGLDIFERINTS---AFELNEREIVSYVHQVCEALQFLHSHNIGHFDIRPENIIYQTR---------------RSSTI  143 (321)
T ss_dssp             CCCCCBHHHHHTSS---SCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSS---------------SCCCE
T ss_pred             cCCCCcHHHHHHhc---CCCCCHHHHHHHHHHHHHHHHHHHHcCCCcccccccceeecCC---------------CceEE
Confidence            99999999999763   4579999999999999999999999999999999999999832               23468


Q ss_pred             EEeecCCccccccCCCCccccccccCCCcccceeccCCCCCccchHhHHHHHHHHHHhCccccccccCCCCCceeeecCc
Q 018699          207 CLVDWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQEKKPWKFQVDTYGLCAIVHMMLHNSYMEIEKKASPDGGLVYLPKL  286 (351)
Q Consensus       207 ~l~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~  286 (351)
                      +|+|||++....   .........+++.|+|||...+..++.++|||||||++|+|++|..||...+.......+.....
T Consensus       144 kl~DFG~~~~~~---~~~~~~~~~~t~~y~ape~~~~~~~~~~~DiWSlGvily~ll~G~~Pf~~~~~~~~~~~i~~~~~  220 (321)
T d1tkia_         144 KIIEFGQARQLK---PGDNFRLLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAETNQQIIENIMNAEY  220 (321)
T ss_dssp             EECCCTTCEECC---TTCEEEEEESCGGGSCHHHHTTCEECHHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHHTCC
T ss_pred             EEcccchhhccc---cCCcccccccccccccchhccCCCCCchhhcccHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCC
Confidence            999999986532   23344556789999999999999999999999999999999999999976553211111111111


Q ss_pred             chh----hhhHHHHHHHHHHHHhcCCCCCChHHHHHHHHHHHH
Q 018699          287 SFK----RYWKVELWKSLFTNLLNMSSGNDKEVLQNLQKSFQD  325 (351)
Q Consensus       287 ~~~----~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~~~~~~  325 (351)
                      .++    ..++ +.+++||.+||.+||++|||+.|+++|||..
T Consensus       221 ~~~~~~~~~~s-~~~~~li~~~L~~dp~~R~s~~eil~hp~~~  262 (321)
T d1tkia_         221 TFDEEAFKEIS-IEAMDFVDRLLVKERKSRMTASEALQHPWLK  262 (321)
T ss_dssp             CCCHHHHTTSC-HHHHHHHHTTSCSSGGGSCCHHHHHHSHHHH
T ss_pred             CCChhhccCCC-HHHHHHHHHHccCChhHCcCHHHHhcCHhhc
Confidence            111    2234 7899999999999999999999999999753

>d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: gamma-subunit of glycogen phosphorylase kinase (Phk)
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

Probab=100.00  E-value=7.6e-51  Score=356.69  Aligned_cols=251  Identities=19%  Similarity=0.210  Sum_probs=200.3

Q ss_pred             CeeEEEEEEeeccCceEEEEEEecCCCCceEEEEecCCCCChH-----H-----HHHHHHHhhhccc-cccccccceeee
Q 018699           47 GKKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFPWE-----F-----YMYRQLDQRISGR-ERSSFGFAHRIH  115 (351)
Q Consensus        47 ~~~Y~i~~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~~~e-----~-----~~~~~~~~~~~~~-~~~~~~~~~~~~  115 (351)
                      .++|++.+.||+|+||+||+|+ +..+|+.||||++.+.....     .     ..++++. .+... .|++++....++
T Consensus         2 ~~~y~~~~~iG~G~~g~V~~~~-~~~~~~~~AvK~i~~~~~~~~~~~~~~~~~~~~~~E~~-~l~~l~~hpnIv~~~~~~   79 (277)
T d1phka_           2 YENYEPKEILGRGVSSVVRRCI-HKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVD-ILRKVSGHPNIIQLKDTY   79 (277)
T ss_dssp             TTTEEEEEEEEECSSEEEEEEE-ETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHH-HHHHHTTCTTBCCEEEEE
T ss_pred             cccCEEceEEecCcCeEEEEEE-ECCCCCEEEEEEEecccccchhHHHHHHHHHHHHHHHH-HHHHhcCCCCeEEEEeec
Confidence            3689999999999999999999 56789999999987643221     1     1112211 22233 478999999999


Q ss_pred             cccCeeEEEEEecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeecc
Q 018699          116 LYSDYSILVCDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDH  195 (351)
Q Consensus       116 ~~~~~~~lv~e~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~  195 (351)
                      ..++.+|+||||+++|+|.+++..    ...+++..++.++.||+.||+|||++||+||||||+||+++           
T Consensus        80 ~~~~~~~ivmE~~~~g~L~~~l~~----~~~l~e~~~~~~~~qi~~al~~lH~~~ivHrDlkp~Nill~-----------  144 (277)
T d1phka_          80 ETNTFFFLVFDLMKKGELFDYLTE----KVTLSEKETRKIMRALLEVICALHKLNIVHRDLKPENILLD-----------  144 (277)
T ss_dssp             ECSSEEEEEEECCTTCBHHHHHHH----HSSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEC-----------
T ss_pred             ccCcceEEEEEcCCCchHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHcCCcccccccceEEEc-----------
Confidence            999999999999999999999987    36899999999999999999999999999999999999999           


Q ss_pred             CCCCCcccCCeEEeecCCccccccCCCCccccccccCCCcccceecc------CCCCCccchHhHHHHHHHHHHhCcccc
Q 018699          196 DRSGPWQDQGLCLVDWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQE------KKPWKFQVDTYGLCAIVHMMLHNSYME  269 (351)
Q Consensus       196 ~~~~~~~~~~~~l~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~------~~~~~~~~DiwslG~il~~l~~g~~p~  269 (351)
                            .++.+||+|||++.....   ........||+.|+|||.+.      ...++.++||||+||++|+|++|+.||
T Consensus       145 ------~~~~~kl~DFG~a~~~~~---~~~~~~~~gt~~y~~PE~~~~~~~~~~~~~~~~~DiwslGvilyeml~g~~Pf  215 (277)
T d1phka_         145 ------DDMNIKLTDFGFSCQLDP---GEKLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPF  215 (277)
T ss_dssp             ------TTCCEEECCCTTCEECCT---TCCBCCCCSCGGGCCHHHHHHHHCTTSCCBCTHHHHHHHHHHHHHHHHSSCSS
T ss_pred             ------CCCCeEEccchheeEccC---CCceeeeeccCCCCCHHHhhccccccCCCCCchheEcccchhhhhhccCCCCC
Confidence                  788899999999976432   33345567999999999984      345678999999999999999999999


Q ss_pred             ccccCCCCCcee----eecCcchhhhhHHHHHHHHHHHHhcCCCCCChHHHHHHHHHHH
Q 018699          270 IEKKASPDGGLV----YLPKLSFKRYWKVELWKSLFTNLLNMSSGNDKEVLQNLQKSFQ  324 (351)
Q Consensus       270 ~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~~~~~  324 (351)
                      ...+........    .....+....++ +.+++||.+||++||++|||+.|+|+|||.
T Consensus       216 ~~~~~~~~~~~i~~~~~~~~~~~~~~~s-~~~~~li~~~L~~~p~~R~s~~eil~h~~~  273 (277)
T d1phka_         216 WHRKQMLMLRMIMSGNYQFGSPEWDDYS-DTVKDLVSRFLVVQPQKRYTAEEALAHPFF  273 (277)
T ss_dssp             CCSSHHHHHHHHHHTCCCCCTTTGGGSC-HHHHHHHHHHCCSSGGGSCCHHHHTTSGGG
T ss_pred             CCCCHHHHHHHHHhCCCCCCCcccccCC-HHHHHHHHHHccCChhHCcCHHHHHcCHHH
Confidence            865532111111    111222223445 889999999999999999999999999863

>d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: B-Raf kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1e-50  Score=355.89  Aligned_cols=253  Identities=16%  Similarity=0.195  Sum_probs=192.5

Q ss_pred             EEEcCeeEEEEEEeeccCceEEEEEEecCCCCceEEEEecCCCCC--hHHHHHHHHHhhhccccccccccceeeecccCe
Q 018699           43 IEIGGKKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFP--WEFYMYRQLDQRISGRERSSFGFAHRIHLYSDY  120 (351)
Q Consensus        43 ~~i~~~~Y~i~~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~~--~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  120 (351)
                      ++|..++|++.+.||+|+||+||+|+++    ..||||++.....  .....+...........|++++....+.. .+.
T Consensus         3 wei~~~~~~~~~~lG~G~fg~Vy~~~~~----~~vAvK~~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~~~~~~~-~~~   77 (276)
T d1uwha_           3 WEIPDGQITVGQRIGSGSFGTVYKGKWH----GDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYST-APQ   77 (276)
T ss_dssp             CBCCTTCCCCCSEEEECSSCEEEEEESS----SEEEEEECCCSSCCTTHHHHHHHHHHHHTTCCCTTBCCEEEEEC-SSS
T ss_pred             cccccccEEEEEEEeeCCCcEEEEEEEC----CEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeeeeEEEe-ccE
Confidence            3567789999999999999999999852    3599999875432  23333333334455667899988887654 456


Q ss_pred             eEEEEEecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeeccCCCCC
Q 018699          121 SILVCDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSGP  200 (351)
Q Consensus       121 ~~lv~e~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~~~~~  200 (351)
                      +++||||+++|+|.+++...   +..+++..+..++.||+.||+|||++||+||||||+||+++                
T Consensus        78 ~~lv~Ey~~~g~L~~~l~~~---~~~~~~~~~~~i~~qi~~gl~yLH~~~ivHrDlKp~NiLl~----------------  138 (276)
T d1uwha_          78 LAIVTQWCEGSSLYHHLHII---ETKFEMIKLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFLH----------------  138 (276)
T ss_dssp             CEEEEECCCEEEHHHHHHTS---CCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEE----------------
T ss_pred             EEEEEecCCCCCHHHHHhhc---cCCCCHHHHHHHHHHHHHHHHHHhcCCEeccccCHHHEEEc----------------
Confidence            79999999999999999764   46799999999999999999999999999999999999999                


Q ss_pred             cccCCeEEeecCCccccccCCCCccccccccCCCcccceeccC---CCCCccchHhHHHHHHHHHHhCccccccccCCCC
Q 018699          201 WQDQGLCLVDWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQEK---KPWKFQVDTYGLCAIVHMMLHNSYMEIEKKASPD  277 (351)
Q Consensus       201 ~~~~~~~l~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~---~~~~~~~DiwslG~il~~l~~g~~p~~~~~~~~~  277 (351)
                       .++.+||+|||+|................||+.|+|||++.+   ..++.++||||+||++|||++|..||........
T Consensus       139 -~~~~~Kl~DFGla~~~~~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~~~~sDiwS~Gv~l~el~tg~~Pf~~~~~~~~  217 (276)
T d1uwha_         139 -EDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQ  217 (276)
T ss_dssp             -TTSSEEECCCCCSCC------------CCCCGGGCCHHHHTTCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHH
T ss_pred             -CCCCEEEccccceeeccccCCcccccccccCcccCCHHHHhcccCCCCCchhhhhhhHHHHHHHHHCCCCCCCCChHHH
Confidence             778899999999976543333344456689999999999854   3578999999999999999999999975432210


Q ss_pred             ------CceeeecCcchhhhhHHHHHHHHHHHHhcCCCCCChHHHHHHHH
Q 018699          278 ------GGLVYLPKLSFKRYWKVELWKSLFTNLLNMSSGNDKEVLQNLQK  321 (351)
Q Consensus       278 ------~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~~  321 (351)
                            .....+.....+..++ +.+.+||.+||+.||++|||+.|++.+
T Consensus       218 ~~~~~~~~~~~p~~~~~~~~~~-~~l~~li~~cl~~dp~~RPt~~~il~~  266 (276)
T d1uwha_         218 IIFMVGRGYLSPDLSKVRSNCP-KAMKRLMAECLKKKRDERPLFPQILAS  266 (276)
T ss_dssp             HHHHHHHTSCCCCGGGSCTTCC-HHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             HHHHHhcCCCCCcchhccccch-HHHHHHHHHHcCCCHhHCcCHHHHHHH
Confidence                  0001111122333344 789999999999999999999999876

>d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Proto-oncogene serine/threonine-protein kinase Pim-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.2e-50  Score=355.39  Aligned_cols=241  Identities=18%  Similarity=0.218  Sum_probs=194.8

Q ss_pred             CeeEEEEEEeeccCceEEEEEEecCCCCceEEEEecCCCC-------------ChHHHHHHHHHhhhcccccccccccee
Q 018699           47 GKKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAF-------------PWEFYMYRQLDQRISGRERSSFGFAHR  113 (351)
Q Consensus        47 ~~~Y~i~~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~-------------~~e~~~~~~~~~~~~~~~~~~~~~~~~  113 (351)
                      .++|++.+.||+|+||+||+|+ +..+|+.||||++.+..             ..|...++.+.     ..|++++....
T Consensus         3 ~~~Y~i~~~lG~G~fg~Vy~a~-~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~-----~~h~nIv~~~~   76 (273)
T d1xwsa_           3 ESQYQVGPLLGSGGFGSVYSGI-RVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVS-----SGFSGVIRLLD   76 (273)
T ss_dssp             TTTEEEEEEEEEETTEEEEEEE-ETTTCCEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHC-----SSSCSBCCEEE
T ss_pred             CCeEEEeEEEeeCCCeEEEEEE-ECCCCCEEEEEEEehHHccchhhhhHHHHHHHHHHHHHHhc-----cCCCCccEEEE
Confidence            4689999999999999999999 57789999999875321             12333333322     24678888889


Q ss_pred             eecccCeeEEEEEecCC-CCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCccee
Q 018699          114 IHLYSDYSILVCDYLSQ-GTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTV  192 (351)
Q Consensus       114 ~~~~~~~~~lv~e~~~~-~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~  192 (351)
                      ++..++..|+||||+.+ +++.+++..    +..+++..++.++.||+.||.|||++||+||||||+||+++.       
T Consensus        77 ~~~~~~~~~lv~e~~~~~~~l~~~~~~----~~~l~e~~~~~~~~qi~~al~~lH~~~iiHrDiKp~NIll~~-------  145 (273)
T d1xwsa_          77 WFERPDSFVLILERPEPVQDLFDFITE----RGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDL-------  145 (273)
T ss_dssp             EEECSSEEEEEEECCSSEEEHHHHHHH----HCSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEET-------
T ss_pred             EEeeCCeEEEEEEeccCcchHHHHHhc----cCCCCHHHHHHHHHHHHHHHHHHHHCCCccccCcccceEEec-------
Confidence            88889999999999975 688888876    468999999999999999999999999999999999999983       


Q ss_pred             eccCCCCCcccCCeEEeecCCccccccCCCCccccccccCCCcccceeccCCCC-CccchHhHHHHHHHHHHhCcccccc
Q 018699          193 LDHDRSGPWQDQGLCLVDWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQEKKPW-KFQVDTYGLCAIVHMMLHNSYMEIE  271 (351)
Q Consensus       193 ~~~~~~~~~~~~~~~l~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~-~~~~DiwslG~il~~l~~g~~p~~~  271 (351)
                               ..+.+||+|||+|....    .....+..||+.|+|||++.+..+ +.++|||||||++|+|++|..||..
T Consensus       146 ---------~~~~vkl~DFG~a~~~~----~~~~~~~~GT~~y~aPE~~~~~~~~~~~~DiwSlGvilyell~g~~Pf~~  212 (273)
T d1xwsa_         146 ---------NRGELKLIDFGSGALLK----DTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEH  212 (273)
T ss_dssp             ---------TTTEEEECCCTTCEECC----SSCBCCCCSCGGGSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCS
T ss_pred             ---------CCCeEEECccccceecc----cccccccccCCCcCCHHHHcCCCCCCcccccccceeeehhHhhCCCCCCC
Confidence                     23569999999986432    233456789999999999987665 5789999999999999999999976


Q ss_pred             ccCCCCCceeeecCcchhhhhHHHHHHHHHHHHhcCCCCCChHHHHHHHHHHH
Q 018699          272 KKASPDGGLVYLPKLSFKRYWKVELWKSLFTNLLNMSSGNDKEVLQNLQKSFQ  324 (351)
Q Consensus       272 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~~~~~  324 (351)
                      ......+      ...++...+ +++++||.+||.+||++|||+.|+++|||.
T Consensus       213 ~~~i~~~------~~~~~~~~s-~~~~~li~~~L~~dp~~R~s~~eil~hp~~  258 (273)
T d1xwsa_         213 DEEIIRG------QVFFRQRVS-SECQHLIRWCLALRPSDRPTFEEIQNHPWM  258 (273)
T ss_dssp             HHHHHHC------CCCCSSCCC-HHHHHHHHHHTCSSGGGSCCHHHHHTSGGG
T ss_pred             chHHhhc------ccCCCCCCC-HHHHHHHHHHccCCHhHCcCHHHHhcCHhh
Confidence            5432122      222333344 889999999999999999999999999863

>d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Abelsone tyrosine kinase (abl)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=100.00  E-value=2.2e-50  Score=355.90  Aligned_cols=263  Identities=12%  Similarity=0.107  Sum_probs=207.3

Q ss_pred             EEEcCeeEEEEEEeeccCceEEEEEEecCCCCceEEEEecCCCCChHHHHHHHHHhhhccccccccccceeeecccCeeE
Q 018699           43 IEIGGKKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFPWEFYMYRQLDQRISGRERSSFGFAHRIHLYSDYSI  122 (351)
Q Consensus        43 ~~i~~~~Y~i~~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  122 (351)
                      ++|..++|++.+.||+|+||+||+|++ ..+++.||||++..+........+++ .......|++++....++..++..+
T Consensus        12 wei~~~~~~~~~~iG~G~fg~Vy~a~~-~~~~~~vAvK~i~~~~~~~~~~~~E~-~il~~l~HpnIv~~~~~~~~~~~~~   89 (287)
T d1opja_          12 WEMERTDITMKHKLGGGQYGEVYEGVW-KKYSLTVAVKTLKEDTMEVEEFLKEA-AVMKEIKHPNLVQLLGVCTREPPFY   89 (287)
T ss_dssp             TBCCGGGEEEEEETTTTTTSSEEEEEE-GGGTEEEEEEECCTTCSCHHHHHHHH-HHHHHCCCTTBCCEEEEECSSSSCE
T ss_pred             cEecHHHeEEeeEEeeCCCeEEEEEEE-CCCCeEEEEEEECCccchHHHHHHHH-HHHHhCCCCCEecCCccEeeCCeeE
Confidence            567778999999999999999999994 67789999999887655443333333 3345567899999999998889999


Q ss_pred             EEEEecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeeccCCCCCcc
Q 018699          123 LVCDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSGPWQ  202 (351)
Q Consensus       123 lv~e~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~~~~~~~  202 (351)
                      +||||+++|+|.+++....  ...+++..+..++.||+.||+|||++||+||||||+||+++                 .
T Consensus        90 iv~E~~~~g~l~~~l~~~~--~~~~~~~~~~~i~~qi~~gL~yLH~~~iiHrDlKp~NILl~-----------------~  150 (287)
T d1opja_          90 IITEFMTYGNLLDYLRECN--RQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVG-----------------E  150 (287)
T ss_dssp             EEEECCTTCBHHHHHHHSC--TTTSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEC-----------------G
T ss_pred             EEeecccCcchHHHhhhcc--ccchHHHHHHHHHHHHHHHHHHHHHCCcccCccccCeEEEC-----------------C
Confidence            9999999999999987632  45789999999999999999999999999999999999999                 7


Q ss_pred             cCCeEEeecCCccccccCCCCccccccccCCCcccceeccCCCCCccchHhHHHHHHHHHHhCccccccccCCCC-Cc-e
Q 018699          203 DQGLCLVDWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQEKKPWKFQVDTYGLCAIVHMMLHNSYMEIEKKASPD-GG-L  280 (351)
Q Consensus       203 ~~~~~l~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~p~~~~~~~~~-~~-~  280 (351)
                      ++.+||+|||+|...... .........|++.|+|||++.+..++.++||||+||++|+|++|..|+........ .. .
T Consensus       151 ~~~~Kl~DFG~a~~~~~~-~~~~~~~~~g~~~y~aPE~~~~~~~~~k~DiwS~Gv~l~ell~~~~p~~~~~~~~~~~~~i  229 (287)
T d1opja_         151 NHLVKVADFGLSRLMTGD-TYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELL  229 (287)
T ss_dssp             GGCEEECCCCCTTTCCSS-SSEEETTEEECGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHHHH
T ss_pred             CCcEEEccccceeecCCC-CceeeccccccccccChHHHcCCCCCchhhhhhHHHHHHHHHhCCCCCCCcchHHHHHHHH
Confidence            888999999999754321 12223344578899999999999999999999999999999998776643322100 00 0


Q ss_pred             eeecCcchhhhhHHHHHHHHHHHHhcCCCCCChHHHHHHHHHHHHHHhh
Q 018699          281 VYLPKLSFKRYWKVELWKSLFTNLLNMSSGNDKEVLQNLQKSFQDYLCS  329 (351)
Q Consensus       281 ~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~~~~~~~~~~  329 (351)
                      ......+.+..++ +.+.+||.+||+.||++|||+.|+++ .|+.++..
T Consensus       230 ~~~~~~~~~~~~~-~~l~~li~~cl~~dP~~Rps~~ei~~-~L~~~~~~  276 (287)
T d1opja_         230 EKDYRMERPEGCP-EKVYELMRACWQWNPSDRPSFAEIHQ-AFETMFQE  276 (287)
T ss_dssp             HTTCCCCCCTTCC-HHHHHHHHHHTCSSGGGSCCHHHHHH-HHHHTTSS
T ss_pred             hcCCCCCCCccch-HHHHHHHHHHcCCCHhHCcCHHHHHH-HHHHHHHh
Confidence            0112234445555 88999999999999999999999865 35555443

>d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase Itk/Tsk
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=6.3e-50  Score=349.00  Aligned_cols=252  Identities=13%  Similarity=0.089  Sum_probs=191.8

Q ss_pred             EcCeeEEEEEEeeccCceEEEEEEecCCCCceEEEEecCCCCChHHHHHHHHHhhhccccccccccceeeecccCeeEEE
Q 018699           45 IGGKKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFPWEFYMYRQLDQRISGRERSSFGFAHRIHLYSDYSILV  124 (351)
Q Consensus        45 i~~~~Y~i~~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv  124 (351)
                      |..++|++.+.||+|+||+||+|++  .+++.||||++......+.+..+++. ......|++++.+.+++..++..++|
T Consensus         2 idp~~~~~~~~iG~G~fg~Vy~~~~--~~~~~vAvK~i~~~~~~~~~~~~E~~-~l~~l~HpnIv~~~g~~~~~~~~~lv   78 (263)
T d1sm2a_           2 IDPSELTFVQEIGSGQFGLVHLGYW--LNKDKVAIKTIREGAMSEEDFIEEAE-VMMKLSHPKLVQLYGVCLEQAPICLV   78 (263)
T ss_dssp             BCCSCEEEEEEEECCSSCCEEEEEE--TTTEEEEEEECCSSSSCHHHHHHHHH-HHHHCCCTTBCCEEEEECSSSSCEEE
T ss_pred             CChHHcEEEEEEeeCCCeEEEEEEE--CCCCEEEEEEECCCcCcHHHHHHHHH-HHHhcCCCCcccccceeccCCceEEE
Confidence            3457899999999999999999995  34678999999876655555444443 34456789999999999888999999


Q ss_pred             EEecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeeccCCCCCcccC
Q 018699          125 CDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSGPWQDQ  204 (351)
Q Consensus       125 ~e~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~~~~~~~~~  204 (351)
                      |||+++|+|.+++...   ...+++..+..++.|++.||.|||+++|+||||||+||+++                 .++
T Consensus        79 ~E~~~~g~L~~~l~~~---~~~~~~~~~~~i~~qia~gl~~lH~~~iiHrDlKp~Nill~-----------------~~~  138 (263)
T d1sm2a_          79 FEFMEHGCLSDYLRTQ---RGLFAAETLLGMCLDVCEGMAYLEEACVIHRDLAARNCLVG-----------------ENQ  138 (263)
T ss_dssp             EECCTTCBHHHHHHTT---TTCCCHHHHHHHHHHHHHHHHHHHHTTCCCTTCSGGGEEEC-----------------GGG
T ss_pred             EEecCCCcHHHHhhcc---ccCCCHHHHHHHHHHHHHHHHhhhccceeecccchhheeec-----------------CCC
Confidence            9999999999998764   46789999999999999999999999999999999999999                 788


Q ss_pred             CeEEeecCCccccccCCCCccccccccCCCcccceeccCCCCCccchHhHHHHHHHHHHhC-ccccccccCCCCCc-eee
Q 018699          205 GLCLVDWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQEKKPWKFQVDTYGLCAIVHMMLHN-SYMEIEKKASPDGG-LVY  282 (351)
Q Consensus       205 ~~~l~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g-~~p~~~~~~~~~~~-~~~  282 (351)
                      .+||+|||++...... .........||+.|+|||++.+..++.++||||+||++|||+++ .+||.......... ...
T Consensus       139 ~~Kl~DFGla~~~~~~-~~~~~~~~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvil~el~t~~~~~~~~~~~~~~~~~i~~  217 (263)
T d1sm2a_         139 VIKVSDFGMTRFVLDD-QYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDIST  217 (263)
T ss_dssp             CEEECSCC-------------------CTTSCCHHHHTTCCCCHHHHHHHHHHHHHHHHTTSCCTTCSCCHHHHHHHHHH
T ss_pred             CeEecccchheeccCC-CceeecceecCcccCChHHhcCCCCCchhhhcchHHHHHHHHHCCCCCCCCCCHHHHHHHHHh
Confidence            8999999998654321 11223345689999999999999999999999999999999996 44443322110000 001


Q ss_pred             ecCcchhhhhHHHHHHHHHHHHhcCCCCCChHHHHHHHH
Q 018699          283 LPKLSFKRYWKVELWKSLFTNLLNMSSGNDKEVLQNLQK  321 (351)
Q Consensus       283 ~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~~  321 (351)
                      ......|...+ +.+.+||.+||+.||++|||+.|++++
T Consensus       218 ~~~~~~p~~~~-~~l~~li~~cl~~~p~~Rps~~~il~~  255 (263)
T d1sm2a_         218 GFRLYKPRLAS-THVYQIMNHCWKERPEDRPAFSRLLRQ  255 (263)
T ss_dssp             TCCCCCCTTSC-HHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             cCCCCCccccC-HHHHHHHHHHccCCHhHCcCHHHHHHH
Confidence            12223334444 789999999999999999999999987

>d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Mycobacterial protein kinase PknB, catalytic domain
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=100.00  E-value=6.5e-50  Score=351.86  Aligned_cols=257  Identities=16%  Similarity=0.163  Sum_probs=192.7

Q ss_pred             CeeEEEEEEeeccCceEEEEEEecCCCCceEEEEecCCCCChHHHHHH---HHHhhhccccccccccceeeeccc----C
Q 018699           47 GKKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFPWEFYMYR---QLDQRISGRERSSFGFAHRIHLYS----D  119 (351)
Q Consensus        47 ~~~Y~i~~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~~~e~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~----~  119 (351)
                      .++|++.+.||+|+||+||+|+ +..+|+.||||++.+..........   ..........|++++....+....    .
T Consensus         6 ~drY~i~~~lG~G~fg~Vy~a~-~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~~l~~~~hpniv~~~~~~~~~~~~~~   84 (277)
T d1o6ya_           6 SDRYELGEILGFGGMSEVHLAR-DLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGP   84 (277)
T ss_dssp             TTTEEEEEEEEECSSEEEEEEE-ETTTTEEEEEEEECSTTTTCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEEECSSSE
T ss_pred             cceeEEeEEEeeCCCeEEEEEE-ECCCCCEEEEEEEchhhccCHHHHHHHHHHHHHHHhcCCCCCCcccceeeeccCCCc
Confidence            5789999999999999999999 5778999999999866543322222   222334556788888887776543    3


Q ss_pred             eeEEEEEecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeeccCCCC
Q 018699          120 YSILVCDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSG  199 (351)
Q Consensus       120 ~~~lv~e~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~~~~  199 (351)
                      .+|+||||++|++|.+++..    ++.+++..++.++.||+.||.|||++||+||||||+||+++               
T Consensus        85 ~~~lvmE~~~g~~L~~~~~~----~~~l~~~~~~~i~~qi~~al~~lH~~~iiHrDiKP~NIll~---------------  145 (277)
T d1o6ya_          85 LPYIVMEYVDGVTLRDIVHT----EGPMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANIMIS---------------  145 (277)
T ss_dssp             EEEEEEECCCEEEHHHHHHH----HCSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEE---------------
T ss_pred             eEEEEEECCCCCEehhhhcc----cCCCCHHHHHHHHHHHHHHHHHHHhCCccCccccCcccccC---------------
Confidence            58999999999999998877    36899999999999999999999999999999999999999               


Q ss_pred             CcccCCeEEeecCCccccccCCC-CccccccccCCCcccceeccCCCCCccchHhHHHHHHHHHHhCccccccccCCCCC
Q 018699          200 PWQDQGLCLVDWGRGIDLHLFPD-NMEFEGDCRTSGFRCIEMQEKKPWKFQVDTYGLCAIVHMMLHNSYMEIEKKASPDG  278 (351)
Q Consensus       200 ~~~~~~~~l~Dfg~a~~~~~~~~-~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~p~~~~~~~~~~  278 (351)
                        .++..+++|||.+........ .......+||+.|+|||++.+..++.++|||||||++|+|++|.+||...+.....
T Consensus       146 --~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~~~  223 (277)
T d1o6ya_         146 --ATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVA  223 (277)
T ss_dssp             --TTSCEEECCCTTCEECC----------------TTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHH
T ss_pred             --ccccceeehhhhhhhhccccccccccccccCcccccCHHHHcCCCCCcceecccchHHHHHHHhCCCCCCCcCHHHHH
Confidence              778899999998764332221 22344567999999999999999999999999999999999999999754432110


Q ss_pred             cee----eecCcchhhhhHHHHHHHHHHHHhcCCCCCChHHHHHHHHHHHHH
Q 018699          279 GLV----YLPKLSFKRYWKVELWKSLFTNLLNMSSGNDKEVLQNLQKSFQDY  326 (351)
Q Consensus       279 ~~~----~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~~~~~~~  326 (351)
                      ...    ..+.......++ +.+.+||.+||++||++||++.++|.+.|...
T Consensus       224 ~~~~~~~~~~~~~~~~~~s-~~l~~li~~~L~~dp~~R~~sa~~l~~~l~r~  274 (277)
T d1o6ya_         224 YQHVREDPIPPSARHEGLS-ADLDAVVLKALAKNPENRYQTAAEMRADLVRV  274 (277)
T ss_dssp             HHHHHCCCCCGGGTSSSCC-HHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHH
T ss_pred             HHHHhcCCCCCchhccCCC-HHHHHHHHHHccCCHhHCHhHHHHHHHHHHHH
Confidence            000    011111222334 78999999999999999997777777776654

>d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK6
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=4.7e-49  Score=351.33  Aligned_cols=255  Identities=18%  Similarity=0.163  Sum_probs=192.9

Q ss_pred             CeeEEEEEEeeccCceEEEEEEecCCCCceEEEEecCCCCCh-----HHHHHHHHHhhhccccccccccceeeec-----
Q 018699           47 GKKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFPW-----EFYMYRQLDQRISGRERSSFGFAHRIHL-----  116 (351)
Q Consensus        47 ~~~Y~i~~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~~~-----e~~~~~~~~~~~~~~~~~~~~~~~~~~~-----  116 (351)
                      .++|++++.||+|+||+||+|++...+++.||||++......     .......+.+.+....|++++.+.+++.     
T Consensus         6 ~~~Y~i~~~LG~G~fg~V~~a~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~~l~~l~~~~HpnIv~~~~~~~~~~~~   85 (305)
T d1blxa_           6 DQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTD   85 (305)
T ss_dssp             GGTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCTTSCBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEEEECS
T ss_pred             cCCEEEEEEEecccCeEEEEEEEECCCCEEEEEEEEehhhccchHHHHHHHHHHHHHHHhhcCCCCcceeeeeecccccc
Confidence            468999999999999999999954556788999997532111     1111112223333446788888776653     


Q ss_pred             ccCeeEEEEEecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeeccC
Q 018699          117 YSDYSILVCDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHD  196 (351)
Q Consensus       117 ~~~~~~lv~e~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~  196 (351)
                      .....+++|||+.++.+.......   ...+++..++.++.|++.||+|||++||+||||||+||+++            
T Consensus        86 ~~~~~~~~~e~~~~~~~~~~~~~~---~~~~~~~~~~~~~~qi~~aL~yLH~~~ivHrDiKp~NILi~------------  150 (305)
T d1blxa_          86 RETKLTLVFEHVDQDLTTYLDKVP---EPGVPTETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNILVT------------  150 (305)
T ss_dssp             SEEEEEEEEECCSCBHHHHHHHSC---TTCSCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEC------------
T ss_pred             cCceEEEEEEeccCCchhhhhhcc---CCCCCHHHHHHHHHHHHHHHHHHHhCCEEecCCCccEEEEc------------
Confidence            345789999999776665544432   46789999999999999999999999999999999999999            


Q ss_pred             CCCCcccCCeEEeecCCccccccCCCCccccccccCCCcccceeccCCCCCccchHhHHHHHHHHHHhCccccccccCCC
Q 018699          197 RSGPWQDQGLCLVDWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQEKKPWKFQVDTYGLCAIVHMMLHNSYMEIEKKASP  276 (351)
Q Consensus       197 ~~~~~~~~~~~l~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~p~~~~~~~~  276 (351)
                           ..+.+||+|||++....   .........||+.|+|||++.+.+|+.++|||||||++|+|++|.+||...+...
T Consensus       151 -----~~~~~kl~dfg~~~~~~---~~~~~~~~~gT~~Y~APE~~~~~~y~~~~DiwSlG~il~ell~g~~pf~~~~~~~  222 (305)
T d1blxa_         151 -----SSGQIKLADFGLARIYS---FQMALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVD  222 (305)
T ss_dssp             -----TTCCEEECSCCSCCCCC---GGGGGCCCCCCCTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHH
T ss_pred             -----CCCCeeecchhhhhhhc---ccccCCCcccChhhcCcchhcCCCCChhehhhchHHHHHHHHHCCCCCCCCCHHH
Confidence                 77889999999886422   2334556789999999999999999999999999999999999999996443110


Q ss_pred             -------------------C-----Ccee---eecCcchhhhhHHHHHHHHHHHHhcCCCCCChHHHHHHHHHHHH
Q 018699          277 -------------------D-----GGLV---YLPKLSFKRYWKVELWKSLFTNLLNMSSGNDKEVLQNLQKSFQD  325 (351)
Q Consensus       277 -------------------~-----~~~~---~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~~~~~~  325 (351)
                                         .     ....   ..+...+....+ +.+++||.+||.+||++|||+.|+|+|||..
T Consensus       223 ~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s-~~~~dli~~mL~~dP~~R~sa~e~L~Hpff~  297 (305)
T d1blxa_         223 QLGKILDVIGLPGEEDWPRDVALPRQAFHSKSAQPIEKFVTDID-ELGKDLLLKCLTFNPAKRISAYSALSHPYFQ  297 (305)
T ss_dssp             HHHHHHHHHCCCCGGGSCTTCSSCGGGSCCCCCCCGGGTCCSCC-HHHHHHHHHHSCSSTTTSCCHHHHHTSGGGT
T ss_pred             HHHHHHHhhCCCchhcccccccchhhhhccccccchhhccccCC-HHHHHHHHHHCcCChhHCcCHHHHhcChhhc
Confidence                               0     0000   011111222234 7899999999999999999999999999743

>d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Vascular endothelial growth factor receptor 2 (kdr)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.5e-49  Score=351.94  Aligned_cols=269  Identities=14%  Similarity=0.109  Sum_probs=193.9

Q ss_pred             EEEEcCeeEEEEEEeeccCceEEEEEEecC----CCCceEEEEecCCCCChH-H-HHHHHHHhhhccccccccccceeee
Q 018699           42 TIEIGGKKYQIKGCAGQGGFAKVFKAYVNG----DPEDVVALKIQKPAFPWE-F-YMYRQLDQRISGRERSSFGFAHRIH  115 (351)
Q Consensus        42 ~~~i~~~~Y~i~~~lg~G~~g~V~~a~~~~----~~~~~vaiK~~~~~~~~e-~-~~~~~~~~~~~~~~~~~~~~~~~~~  115 (351)
                      .++|..++|++.++||+|+||.||+|.+..    .+++.||||++....... . ..+.+.........|++++......
T Consensus         7 ~wei~~~~y~~~~~iG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~e~~~l~~~~~h~~iv~~~~~~   86 (299)
T d1ywna1           7 KWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGAC   86 (299)
T ss_dssp             HHBCCGGGEEEEEEEEECSSCEEEEEEEESTTSSSCEEEEEEEEC----CHHHHHHHHHHHHHHHHHCCCTTBCCEEEEE
T ss_pred             cccccHHHEEEeeEEeecCCeEEEEEEEcCCCcccCCeEEEEEEEccccCcHHHHHHHHHHHHHHhhcCCCeEEEeeeee
Confidence            345667899999999999999999999632    346789999987654332 1 1222222222334566776666655


Q ss_pred             c-ccCeeEEEEEecCCCCHHHHHHHHHhh------------CCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEE
Q 018699          116 L-YSDYSILVCDYLSQGTLQDAINSYVVI------------GKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLL  182 (351)
Q Consensus       116 ~-~~~~~~lv~e~~~~~sL~~~l~~~~~~------------~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nil  182 (351)
                      . .++.+++||||+++|+|.+++......            ...+++..+..++.||+.||+|||+++|+||||||+||+
T Consensus        87 ~~~~~~~~iv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~gl~ylH~~~ivHrDlKp~NIL  166 (299)
T d1ywna1          87 TKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNIL  166 (299)
T ss_dssp             CSTTSCCEEEEECCTTCBHHHHHHHTGGGBCC-----------CBCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEE
T ss_pred             ccCCCeEEEEEEecCCCcHHHHHHhccccccccccchhhhhcccCCHHHHHHHHHHHHHHHHHHHhCCCcCCcCCcccee
Confidence            4 355789999999999999999764211            235889999999999999999999999999999999999


Q ss_pred             EeecCCcceeeccCCCCCcccCCeEEeecCCccccccCCCCccccccccCCCcccceeccCCCCCccchHhHHHHHHHHH
Q 018699          183 IRYARDELTVLDHDRSGPWQDQGLCLVDWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQEKKPWKFQVDTYGLCAIVHMM  262 (351)
Q Consensus       183 l~~~~~~~~~~~~~~~~~~~~~~~~l~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~l  262 (351)
                      ++                 .++.+||+|||+|+...............||+.|+|||++.+..++.++||||+||++|+|
T Consensus       167 l~-----------------~~~~~Kl~DFGla~~~~~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~sDiwS~Gvil~el  229 (299)
T d1ywna1         167 LS-----------------EKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEI  229 (299)
T ss_dssp             EC-----------------GGGCEEECC------CCSCTTSCCTTSCCCGGGGCCHHHHHHCCCCHHHHHHHHHHHHHHH
T ss_pred             EC-----------------CCCcEEEccCcchhhccccccccccCceeeCccccchhHhhcCCCCcccceeehHHHHHHH
Confidence            99                 7888999999999754433333344556799999999999999999999999999999999


Q ss_pred             HhCc-cccccccCCCCC--ceeeecCcchhhhhHHHHHHHHHHHHhcCCCCCChHHHHHHHHHHHHHHhh
Q 018699          263 LHNS-YMEIEKKASPDG--GLVYLPKLSFKRYWKVELWKSLFTNLLNMSSGNDKEVLQNLQKSFQDYLCS  329 (351)
Q Consensus       263 ~~g~-~p~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~~~~~~~~~~  329 (351)
                      ++|. +||.........  ..........+..++ +.+.+||.+||+.||++|||+.|+++| +++.+++
T Consensus       230 lt~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~l~~li~~cl~~dP~~Rpt~~eil~~-L~~ilq~  297 (299)
T d1ywna1         230 FSLGASPYPGVKIDEEFCRRLKEGTRMRAPDYTT-PEMYQTMLDCWHGEPSQRPTFSELVEH-LGNLLQA  297 (299)
T ss_dssp             HTTSCCSSTTCCCSHHHHHHHHHTCCCCCCTTCC-HHHHHHHHHHTCSSGGGSCCHHHHHHH-HHHHHHH
T ss_pred             HhCCCCCCCCCCHHHHHHHHHhcCCCCCCCccCC-HHHHHHHHHHcCCChhHCcCHHHHHHH-HHHHHhC
Confidence            9875 566543322100  001122334445555 889999999999999999999999987 3444443

>d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fl cytokine receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.1e-49  Score=357.85  Aligned_cols=261  Identities=13%  Similarity=0.046  Sum_probs=199.7

Q ss_pred             EEEcCeeEEEEEEeeccCceEEEEEEecCCC----CceEEEEecCCCCCh-H-HHHHHHHHhhhccccccccccceeeec
Q 018699           43 IEIGGKKYQIKGCAGQGGFAKVFKAYVNGDP----EDVVALKIQKPAFPW-E-FYMYRQLDQRISGRERSSFGFAHRIHL  116 (351)
Q Consensus        43 ~~i~~~~Y~i~~~lg~G~~g~V~~a~~~~~~----~~~vaiK~~~~~~~~-e-~~~~~~~~~~~~~~~~~~~~~~~~~~~  116 (351)
                      +++..++|++.+.||+|+||+||+|++...+    ...||+|.+...... . ....+++........|++++.+..++.
T Consensus        32 wei~~~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~HpnIv~l~~~~~  111 (325)
T d1rjba_          32 WEFPRENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENIVNLLGACT  111 (325)
T ss_dssp             GBCCGGGEEEEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEEC
T ss_pred             ccCCHHHeEEeeEEeeCCCeEEEEEEEcCCCcccceeEEEEEEeccccCHHHHHHHHHHHHHHHHhcCCCcEeEEEEEEe
Confidence            4567789999999999999999999964322    247899987654221 1 122222222222336899999999998


Q ss_pred             ccCeeEEEEEecCCCCHHHHHHHHHh-------------------hCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCC
Q 018699          117 YSDYSILVCDYLSQGTLQDAINSYVV-------------------IGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFK  177 (351)
Q Consensus       117 ~~~~~~lv~e~~~~~sL~~~l~~~~~-------------------~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~  177 (351)
                      ..+.+|+||||+++|+|.+++.....                   ....+++..++.++.||+.||+|||+++|+|||||
T Consensus       112 ~~~~~~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~IiHRDlK  191 (325)
T d1rjba_         112 LSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFKSCVHRDLA  191 (325)
T ss_dssp             SSSSCEEEEECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHHHTTEEETTCS
T ss_pred             eCCeEEEEEEcCCCCcHHHHHHhccCCCcchhhhhccccccccccccCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCc
Confidence            89999999999999999999976421                   01358899999999999999999999999999999


Q ss_pred             CCcEEEeecCCcceeeccCCCCCcccCCeEEeecCCccccccCCCCccccccccCCCcccceeccCCCCCccchHhHHHH
Q 018699          178 PDNLLIRYARDELTVLDHDRSGPWQDQGLCLVDWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQEKKPWKFQVDTYGLCA  257 (351)
Q Consensus       178 p~Nill~~~~~~~~~~~~~~~~~~~~~~~~l~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~  257 (351)
                      |+||+++                 .++.+||+|||+|+............+..||+.|+|||++.+..++.++|||||||
T Consensus       192 p~Nill~-----------------~~~~~Kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~DiwS~Gv  254 (325)
T d1rjba_         192 ARNVLVT-----------------HGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGI  254 (325)
T ss_dssp             GGGEEEE-----------------TTTEEEECCCGGGSCGGGCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHH
T ss_pred             hhccccc-----------------cCCeEEEeeccccccccCCCceeeeccccCCCccCChHHHcCCCCCcceeccchhH
Confidence            9999999                 77889999999997654333333344567899999999999999999999999999


Q ss_pred             HHHHHHh-CccccccccCCCCCce--eeecCcchhhhhHHHHHHHHHHHHhcCCCCCChHHHHHHHH
Q 018699          258 IVHMMLH-NSYMEIEKKASPDGGL--VYLPKLSFKRYWKVELWKSLFTNLLNMSSGNDKEVLQNLQK  321 (351)
Q Consensus       258 il~~l~~-g~~p~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~~  321 (351)
                      ++|+|++ |..||...........  ......+.|..++ +.+++||.+||+.||++|||+.|++++
T Consensus       255 il~emlt~g~~Pf~~~~~~~~~~~~~~~~~~~~~p~~~~-~~l~~li~~cl~~dP~~RPt~~ei~~~  320 (325)
T d1rjba_         255 LLWEIFSLGVNPYPGIPVDANFYKLIQNGFKMDQPFYAT-EEIYIIMQSCWAFDSRKRPSFPNLTSF  320 (325)
T ss_dssp             HHHHHTTTSCCSSTTCCCSHHHHHHHHTTCCCCCCTTCC-HHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             HHHHHHhCCCCCCCCCCHHHHHHHHHhcCCCCCCCCcCC-HHHHHHHHHHcCCChhHCcCHHHHHHH
Confidence            9999997 8999975443211000  0112233444555 889999999999999999999999987

>d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 7, CDK7
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=5.1e-49  Score=349.97  Aligned_cols=246  Identities=19%  Similarity=0.191  Sum_probs=188.1

Q ss_pred             EEEEeeccCceEEEEEEecCCCCceEEEEecCCCCChHH------HHHHHHHhhhccccccccccceeeecccCeeEEEE
Q 018699           52 IKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFPWEF------YMYRQLDQRISGRERSSFGFAHRIHLYSDYSILVC  125 (351)
Q Consensus        52 i~~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~~~e~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~  125 (351)
                      ..+.||+|+||+||+|+ +..+|+.||||++......+.      ..++++ .......|++++....++..++..|+||
T Consensus         2 ~l~~lG~G~fg~Vy~~~-~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~Ei-~il~~l~hpnIv~~~~~~~~~~~~~ivm   79 (299)
T d1ua2a_           2 KLDFLGEGQFATVYKAR-DKNTNQIVAIKKIKLGHRSEAKDGINRTALREI-KLLQELSHPNIIGLLDAFGHKSNISLVF   79 (299)
T ss_dssp             EEEEEEEETTEEEEEEE-CSSCCSEEEEEEC------------CTHHHHHH-HHHHHCCCTTBCCEEEEECCTTCCEEEE
T ss_pred             cceEeccCcCeEEEEEE-ECCCCcEEEEEEEehhhhhhhhHHHHHHHHHHH-HHHHhCCCCCEeEEEeeeccCCceeehh
Confidence            46899999999999999 577899999999875432211      122222 2234456889999999999999999999


Q ss_pred             EecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeeccCCCCCcccCC
Q 018699          126 DYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSGPWQDQG  205 (351)
Q Consensus       126 e~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~~~~~~~~~~  205 (351)
                      ||+.++++..+...    +..+++..++.++.||+.||+|||++||+||||||+||+++                 .++.
T Consensus        80 E~~~~~~~~~~~~~----~~~l~~~~~~~~~~qil~aL~~lH~~~iiHrDiKp~NIli~-----------------~~~~  138 (299)
T d1ua2a_          80 DFMETDLEVIIKDN----SLVLTPSHIKAYMLMTLQGLEYLHQHWILHRDLKPNNLLLD-----------------ENGV  138 (299)
T ss_dssp             ECCSEEHHHHHTTC----CSSCCSSHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEC-----------------TTCC
T ss_pred             hhhcchHHhhhhhc----ccCCCHHHHHHHHHHHHHHHHHhhccceecccCCcceEEec-----------------CCCc
Confidence            99988776666544    57899999999999999999999999999999999999999                 7788


Q ss_pred             eEEeecCCccccccCCCCccccccccCCCcccceeccC-CCCCccchHhHHHHHHHHHHhCccccccccCCC--------
Q 018699          206 LCLVDWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQEK-KPWKFQVDTYGLCAIVHMMLHNSYMEIEKKASP--------  276 (351)
Q Consensus       206 ~~l~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~~DiwslG~il~~l~~g~~p~~~~~~~~--------  276 (351)
                      +||+|||++.....  ........+||+.|+|||++.+ ..++.++|||||||++|+|++|.+||.......        
T Consensus       139 ~KL~DFG~a~~~~~--~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~el~~g~~pf~~~~~~~~l~~i~~~  216 (299)
T d1ua2a_         139 LKLADFGLAKSFGS--PNRAYTHQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLDQLTRIFET  216 (299)
T ss_dssp             EEECCCGGGSTTTS--CCCCCCCSCCCCTTCCHHHHTTCSCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHH
T ss_pred             cccccCccccccCC--CcccccceecChhhccHHHHccCCCCChhhhhhhcchHHHHHHhCcCCCCCCCHHHHHHHHHHh
Confidence            99999999865332  2233445679999999999865 567999999999999999999999986432110        


Q ss_pred             -----------------CCceeeecCcchhh---hhHHHHHHHHHHHHhcCCCCCChHHHHHHHHHH
Q 018699          277 -----------------DGGLVYLPKLSFKR---YWKVELWKSLFTNLLNMSSGNDKEVLQNLQKSF  323 (351)
Q Consensus       277 -----------------~~~~~~~~~~~~~~---~~~~~~~~~li~~~L~~dP~~R~s~~e~l~~~~  323 (351)
                                       .......+..+...   ..+ +.+.+||.+||++||++|||+.|+|+|||
T Consensus       217 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s-~~~~dll~~~L~~dP~~R~sa~e~L~Hp~  282 (299)
T d1ua2a_         217 LGTPTEEQWPDMCSLPDYVTFKSFPGIPLHHIFSAAG-DDLLDLIQGLFLFNPCARITATQALKMKY  282 (299)
T ss_dssp             HCCCCTTTSSSTTSSTTCCCCCCCCCCCHHHHCTTCC-HHHHHHHHHHHCSSTTTSCCHHHHHTSGG
T ss_pred             cCCCChhhccchhccchhhhhccCCCCChHHhcccCC-HHHHHHHHHHccCChhhCcCHHHHhCCHh
Confidence                             00000111111111   123 78999999999999999999999999986

>d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: ephb2 receptor tyrosine kinase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=100.00  E-value=7.1e-49  Score=348.21  Aligned_cols=256  Identities=11%  Similarity=0.079  Sum_probs=189.4

Q ss_pred             EcCeeEEEEEEeeccCceEEEEEEecCCC--CceEEEEecCCCCChH-HHHHHHHHhhhccccccccccceeeecccCee
Q 018699           45 IGGKKYQIKGCAGQGGFAKVFKAYVNGDP--EDVVALKIQKPAFPWE-FYMYRQLDQRISGRERSSFGFAHRIHLYSDYS  121 (351)
Q Consensus        45 i~~~~Y~i~~~lg~G~~g~V~~a~~~~~~--~~~vaiK~~~~~~~~e-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  121 (351)
                      +..++|++.+.||+|+||+||+|++...+  ...||||.+....... ...+......+....|++++.+.+++..++..
T Consensus        23 i~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~~~~~  102 (299)
T d1jpaa_          23 IDISCVKIEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVIHLEGVVTKSTPV  102 (299)
T ss_dssp             CCGGGEEEEEEEEECSSSEEEEEEECC---CCEEEEEEECCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSC
T ss_pred             hChhhcEEeeEEeeCCCeEEEEEEEeCCCCEEEEEEEEEECcccCHHHHHHHHHHHHHHHhCCCCCCccEEEEEeeCCEE
Confidence            45578999999999999999999963322  2368999887654332 22222223344566899999999999888999


Q ss_pred             EEEEEecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeeccCCCCCc
Q 018699          122 ILVCDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSGPW  201 (351)
Q Consensus       122 ~lv~e~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~~~~~~  201 (351)
                      ++||||+++|+|.+++...   +..+++..+..++.||+.||.|||++||+||||||+||+++                 
T Consensus       103 ~iv~Ey~~~g~L~~~~~~~---~~~l~~~~~~~i~~qia~gl~yLH~~~iiHrDlKp~NILl~-----------------  162 (299)
T d1jpaa_         103 MIITEFMENGSLDSFLRQN---DGQFTVIQLVGMLRGIAAGMKYLADMNYVHRDLAARNILVN-----------------  162 (299)
T ss_dssp             EEEEECCTTEEHHHHHHTT---TTCSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEC-----------------
T ss_pred             EEEEEecCCCcceeeeccc---cCCCCHHHHHHHHHHHHHHHHHHhhCCCccCccccceEEEC-----------------
Confidence            9999999999999988764   46799999999999999999999999999999999999999                 


Q ss_pred             ccCCeEEeecCCccccccCCCCcc---ccccccCCCcccceeccCCCCCccchHhHHHHHHHHHHh-CccccccccCCCC
Q 018699          202 QDQGLCLVDWGRGIDLHLFPDNME---FEGDCRTSGFRCIEMQEKKPWKFQVDTYGLCAIVHMMLH-NSYMEIEKKASPD  277 (351)
Q Consensus       202 ~~~~~~l~Dfg~a~~~~~~~~~~~---~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~-g~~p~~~~~~~~~  277 (351)
                      .++.+||+|||+++..........   .....||+.|+|||.+.+..++.++|||||||++|||++ |..||........
T Consensus       163 ~~~~~Kl~DFGla~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~sDvwS~Gvvl~el~t~g~~Pf~~~~~~~~  242 (299)
T d1jpaa_         163 SNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERPYWDMTNQDV  242 (299)
T ss_dssp             TTCCEEECCC-----------------------CGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHH
T ss_pred             CCCcEEECCcccceEccCCCCcceeeecccccCCccccCHHHHhcCCCCcccccccchHHHHHHHhCCCCCCCCCCHHHH
Confidence            788899999999975432221111   223457889999999999999999999999999999998 8999875433210


Q ss_pred             Cce-eeecCcchhhhhHHHHHHHHHHHHhcCCCCCChHHHHHHHH
Q 018699          278 GGL-VYLPKLSFKRYWKVELWKSLFTNLLNMSSGNDKEVLQNLQK  321 (351)
Q Consensus       278 ~~~-~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~~  321 (351)
                      ... ......+.+..++ +.+.+||.+||+.||++|||+.|+++.
T Consensus       243 ~~~i~~~~~~~~~~~~~-~~l~~li~~cl~~~P~~RPs~~ei~~~  286 (299)
T d1jpaa_         243 INAIEQDYRLPPPMDCP-SALHQLMLDCWQKDRNHRPKFGQIVNT  286 (299)
T ss_dssp             HHHHHTTCCCCCCTTCC-HHHHHHHHHHTCSSTTTSCCHHHHHHH
T ss_pred             HHHHHcCCCCCCCccch-HHHHHHHHHHcCCCHhHCcCHHHHHHH
Confidence            000 0011222333344 789999999999999999999998865

>d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase SYK
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=5.8e-49  Score=345.00  Aligned_cols=250  Identities=13%  Similarity=0.054  Sum_probs=189.4

Q ss_pred             EEeeccCceEEEEEEec-CCCCceEEEEecCCCCCh--HHHHHHHHHhhhccccccccccceeeecccCeeEEEEEecCC
Q 018699           54 GCAGQGGFAKVFKAYVN-GDPEDVVALKIQKPAFPW--EFYMYRQLDQRISGRERSSFGFAHRIHLYSDYSILVCDYLSQ  130 (351)
Q Consensus        54 ~~lg~G~~g~V~~a~~~-~~~~~~vaiK~~~~~~~~--e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~  130 (351)
                      ++||+|+||+||+|.+. ..+++.||||++......  ..+.+...........|++++...+++.. +..++||||+++
T Consensus        13 k~iG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~g~~~~-~~~~lvmE~~~~   91 (277)
T d1xbba_          13 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICEA-ESWMLVMEMAEL   91 (277)
T ss_dssp             EEEEECSSEEEEEEEEECSSSEEEEEEEEEC-----CHHHHHHHHHHHHHHTCCCTTBCCEEEEEES-SSEEEEEECCTT
T ss_pred             CCcccCCCeEEEEEEEccCCcCeEEEEEEEChhhCCHHHHHHHHHHHHHHHhCCCCCCceEEEEecc-CCEEEEEEcCCC
Confidence            57999999999999863 345789999998754322  12222222233455678999998887754 456899999999


Q ss_pred             CCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeeccCCCCCcccCCeEEee
Q 018699          131 GTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSGPWQDQGLCLVD  210 (351)
Q Consensus       131 ~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~~~~~~~~~~~~l~D  210 (351)
                      |+|.+++..    ...+++..+..++.||+.||+|||++||+||||||+||+++                 .++.+||+|
T Consensus        92 g~L~~~l~~----~~~l~~~~~~~i~~qi~~gl~ylH~~~iiHrDlKp~Nill~-----------------~~~~~kl~D  150 (277)
T d1xbba_          92 GPLNKYLQQ----NRHVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLV-----------------TQHYAKISD  150 (277)
T ss_dssp             EEHHHHHHH----CTTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEE-----------------ETTEEEECC
T ss_pred             CcHHHHHhh----ccCCCHHHHHHHHHHHHHHHhhHHhCCcccCCCcchhhccc-----------------ccCcccccc
Confidence            999999887    57899999999999999999999999999999999999999                 778899999


Q ss_pred             cCCccccccCCCC-ccccccccCCCcccceeccCCCCCccchHhHHHHHHHHHHh-CccccccccCCCCCce-eeecCcc
Q 018699          211 WGRGIDLHLFPDN-MEFEGDCRTSGFRCIEMQEKKPWKFQVDTYGLCAIVHMMLH-NSYMEIEKKASPDGGL-VYLPKLS  287 (351)
Q Consensus       211 fg~a~~~~~~~~~-~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~-g~~p~~~~~~~~~~~~-~~~~~~~  287 (351)
                      ||++......... .......||+.|+|||++.+..++.++|||||||++|||++ |..||........... ......+
T Consensus       151 FGla~~~~~~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~sDiwS~Gv~l~ellt~g~~Pf~~~~~~~~~~~i~~~~~~~  230 (277)
T d1xbba_         151 FGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGERMG  230 (277)
T ss_dssp             CTTCEECCTTCSEEEC----CCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHHTTCCCC
T ss_pred             hhhhhhccccccccccccccCCCceecCchhhcCCCCCchhhhccchhhhhHHhhCCCCCCCCCCHHHHHHHHHcCCCCC
Confidence            9999754322211 11233468899999999998889999999999999999997 8999975432210000 0112334


Q ss_pred             hhhhhHHHHHHHHHHHHhcCCCCCChHHHHHH---HHHHHHH
Q 018699          288 FKRYWKVELWKSLFTNLLNMSSGNDKEVLQNL---QKSFQDY  326 (351)
Q Consensus       288 ~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l---~~~~~~~  326 (351)
                      .|..++ +.+.+||.+||+.||++|||+.+++   +++|.+.
T Consensus       231 ~p~~~~-~~~~~li~~cl~~dp~~RPs~~~i~~~L~~~~~~~  271 (277)
T d1xbba_         231 CPAGCP-REMYDLMNLCWTYDVENRPGFAAVELRLRNYYYDV  271 (277)
T ss_dssp             CCTTCC-HHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHHHH
T ss_pred             CCcccC-HHHHHHHHHHcCCCHhHCcCHHHHHHHhhCHHhhc
Confidence            455556 8899999999999999999998874   5666543

>d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Lymphocyte kinase (lck)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=4.2e-49  Score=345.31  Aligned_cols=254  Identities=11%  Similarity=0.104  Sum_probs=196.2

Q ss_pred             EEEEcCeeEEEEEEeeccCceEEEEEEecCCCCceEEEEecCCCCChHHHHHHHHHhhhccccccccccceeeecccCee
Q 018699           42 TIEIGGKKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFPWEFYMYRQLDQRISGRERSSFGFAHRIHLYSDYS  121 (351)
Q Consensus        42 ~~~i~~~~Y~i~~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  121 (351)
                      .++|..++|++.+.||+|+||+||+|.+  .+++.||||++...........+++. ......|++++.+..+.. .+..
T Consensus         7 ~wei~~~~~~~~~~iG~G~fg~Vy~~~~--~~~~~vAvK~~~~~~~~~~~~~~E~~-~l~~l~HpnIv~~~g~~~-~~~~   82 (272)
T d1qpca_           7 EWEVPRETLKLVERLGAGQFGEVWMGYY--NGHTKVAVKSLKQGSMSPDAFLAEAN-LMKQLQHQRLVRLYAVVT-QEPI   82 (272)
T ss_dssp             TTBCCGGGEEEEEEEEEETTEEEEEEEE--TTTEEEEEEEECTTSSCHHHHHHHHH-HHHHCCCTTBCCEEEEEC-SSSC
T ss_pred             CeecCHHHeEEeEEEecCCCcEEEEEEE--CCCCEEEEEEEccCcCCHHHHHHHHH-HHHhCCCCCEeEEEeeec-cCCe
Confidence            3456678999999999999999999995  35678999999876554444444433 344557889988888765 4567


Q ss_pred             EEEEEecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeeccCCCCCc
Q 018699          122 ILVCDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSGPW  201 (351)
Q Consensus       122 ~lv~e~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~~~~~~  201 (351)
                      ++||||+++|+|.+++....  +..+++..+..++.||+.||.|||+++|+||||||+||+++                 
T Consensus        83 ~iv~Ey~~~g~L~~~~~~~~--~~~l~~~~~~~i~~qi~~gl~~lH~~~ivHrDiKp~NIll~-----------------  143 (272)
T d1qpca_          83 YIITEYMENGSLVDFLKTPS--GIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVS-----------------  143 (272)
T ss_dssp             EEEEECCTTCBHHHHTTSHH--HHTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEC-----------------
T ss_pred             EEEEEeCCCCcHHHHHhhcC--CCCCCHHHHHHHHHHHHHHHHHHHhCCcccCccchhheeee-----------------
Confidence            89999999999999876543  34689999999999999999999999999999999999999                 


Q ss_pred             ccCCeEEeecCCccccccCCCCccccccccCCCcccceeccCCCCCccchHhHHHHHHHHHHhCccccccc-cCCCC-Cc
Q 018699          202 QDQGLCLVDWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQEKKPWKFQVDTYGLCAIVHMMLHNSYMEIEK-KASPD-GG  279 (351)
Q Consensus       202 ~~~~~~l~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~p~~~~-~~~~~-~~  279 (351)
                      .++.+||+|||+|+..... .........||+.|+|||++.+..++.++|||||||++|||+||..|+... ..... ..
T Consensus       144 ~~~~~Kl~DFGla~~~~~~-~~~~~~~~~gt~~y~APE~~~~~~~~~~sDvwS~Gvvl~ellt~~~~~~~~~~~~~~~~~  222 (272)
T d1qpca_         144 DTLSCKIADFGLARLIEDN-EYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQN  222 (272)
T ss_dssp             TTSCEEECCCTTCEECSSS-CEECCTTCCCCTTTSCHHHHHHCEECHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHH
T ss_pred             cccceeeccccceEEccCC-ccccccccCCcccccChHHHhCCCCCchhhhhhhHHHHHHHHhCCCCCCCCCCHHHHHHH
Confidence            7888999999999754321 112233456889999999999888999999999999999999965554332 21100 00


Q ss_pred             eeeecCcchhhhhHHHHHHHHHHHHhcCCCCCChHHHHHHH
Q 018699          280 LVYLPKLSFKRYWKVELWKSLFTNLLNMSSGNDKEVLQNLQ  320 (351)
Q Consensus       280 ~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~  320 (351)
                      .........|..++ +.+.+||.+||+.||++|||+.++++
T Consensus       223 i~~~~~~~~p~~~~-~~l~~li~~cl~~~P~~Rpt~~ei~~  262 (272)
T d1qpca_         223 LERGYRMVRPDNCP-EELYQLMRLCWKERPEDRPTFDYLRS  262 (272)
T ss_dssp             HHTTCCCCCCTTCC-HHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             HHhcCCCCCcccCh-HHHHHHHHHHcCCCHhHCcCHHHHHH
Confidence            00112223344455 78999999999999999999999876

>d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=4.1e-48  Score=343.76  Aligned_cols=252  Identities=19%  Similarity=0.211  Sum_probs=192.6

Q ss_pred             eeEEEEEEeeccCceEEEEEEecCCCCceEEEEecCCCCChH---HHHHHHHHhhhccccccccccceeeecccCeeEEE
Q 018699           48 KKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFPWE---FYMYRQLDQRISGRERSSFGFAHRIHLYSDYSILV  124 (351)
Q Consensus        48 ~~Y~i~~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~~~e---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv  124 (351)
                      ++|++.+.||+|+||+||+|+ +..+|+.||||++......+   ....++ ...+....|++++.....+..++..|+|
T Consensus         2 d~Y~~~~~lG~G~fg~Vy~~~-~~~~~~~vAvK~i~~~~~~~~~~~~~~~E-i~il~~l~Hp~Iv~~~~~~~~~~~~~iv   79 (298)
T d1gz8a_           2 ENFQKVEKIGEGTYGVVYKAR-NKLTGEVVALKKIRLDTETEGVPSTAIRE-ISLLKELNHPNIVKLLDVIHTENKLYLV   79 (298)
T ss_dssp             TTEEEEEEEEECSSSEEEEEE-ETTTCCEEEEEEEC-------CCHHHHHH-HHHHTTCCCTTBCCEEEEEEETTEEEEE
T ss_pred             CCCEeccEEecCcCeEEEEEE-ECCCCCEEEEEEEehhhcChHHHHHHHHH-HHHHHhCCCCcEEEeccccccccceeEE
Confidence            479999999999999999999 57788999999986543221   122222 2334566789999999999999999999


Q ss_pred             EEecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeeccCCCCCcccC
Q 018699          125 CDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSGPWQDQ  204 (351)
Q Consensus       125 ~e~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~~~~~~~~~  204 (351)
                      |||+. +++.+.+....  ...+++..++.++.||+.||.|||++||+||||||+||+++                 .++
T Consensus        80 ~e~~~-~~~~~~~~~~~--~~~l~e~~~~~~~~qil~~L~yLH~~~IiHrDiKpeNIl~~-----------------~~~  139 (298)
T d1gz8a_          80 FEFLH-QDLKKFMDASA--LTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLIN-----------------TEG  139 (298)
T ss_dssp             EECCS-EEHHHHHHHTT--TTCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEC-----------------TTS
T ss_pred             EeecC-Cchhhhhhhhc--ccCCCHHHHHHHHHHHHHHHHHhhcCCEEccccCchheeec-----------------ccC
Confidence            99995 55555554432  46799999999999999999999999999999999999999                 677


Q ss_pred             CeEEeecCCccccccCCCCccccccccCCCcccceeccCCC-CCccchHhHHHHHHHHHHhCccccccccCCC-------
Q 018699          205 GLCLVDWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQEKKP-WKFQVDTYGLCAIVHMMLHNSYMEIEKKASP-------  276 (351)
Q Consensus       205 ~~~l~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~-~~~~~DiwslG~il~~l~~g~~p~~~~~~~~-------  276 (351)
                      .+||+|||.|....  ..........||+.|+|||++.... ++.++||||+||++|+|++|..||...+...       
T Consensus       140 ~~kl~DFG~a~~~~--~~~~~~~~~~gt~~y~apE~~~~~~~~~~~~DiwSlGvily~m~~G~~Pf~~~~~~~~~~~i~~  217 (298)
T d1gz8a_         140 AIKLADFGLARAFG--VPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFR  217 (298)
T ss_dssp             CEEECSTTHHHHHC--CCSBCTTCCBCCCTTCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHH
T ss_pred             cceeccCCcceecc--CCcccceeecccceeeehhhhccccCCCccccccccchhhhHHhhCCCCCCCCCHHHHHHHHHH
Confidence            89999999986543  2233445567999999999987655 4789999999999999999999985432100       


Q ss_pred             ------C-------------CceeeecCcchh---hhhHHHHHHHHHHHHhcCCCCCChHHHHHHHHHHH
Q 018699          277 ------D-------------GGLVYLPKLSFK---RYWKVELWKSLFTNLLNMSSGNDKEVLQNLQKSFQ  324 (351)
Q Consensus       277 ------~-------------~~~~~~~~~~~~---~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~~~~~  324 (351)
                            .             ............   ..++ +.+.+||.+||.+||++|||+.|+|+|||.
T Consensus       218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s-~~~~dll~~mL~~dP~~R~t~~ell~H~ff  286 (298)
T d1gz8a_         218 TLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLD-EDGRSLLSQMLHYDPNKRISAKAALAHPFF  286 (298)
T ss_dssp             HHCCCCTTTSTTGGGSTTCCTTSCCCCCCCHHHHSTTCC-HHHHHHHHHHTCSSTTTSCCHHHHHTSGGG
T ss_pred             hcCCCchhhccccccccccccccccccccchhhhccCCC-HHHHHHHHHHccCChhHCcCHHHHhCCHhh
Confidence                  0             000000111111   1223 788999999999999999999999999864

>d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Bruton's tyrosine kinase (Btk)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3.8e-49  Score=342.45  Aligned_cols=252  Identities=11%  Similarity=0.044  Sum_probs=203.6

Q ss_pred             cCeeEEEEEEeeccCceEEEEEEecCCCCceEEEEecCCCCChHHHHHHHHHhhhccccccccccceeeecccCeeEEEE
Q 018699           46 GGKKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFPWEFYMYRQLDQRISGRERSSFGFAHRIHLYSDYSILVC  125 (351)
Q Consensus        46 ~~~~Y~i~~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~  125 (351)
                      +-++|++.++||+|+||+||+|++  .+++.||||++.+....+...++++ .......|++++.+..+....+.+++||
T Consensus         2 ~~~~~~~~~~iG~G~fg~Vy~~~~--~~~~~vAvK~l~~~~~~~~~~~~Ev-~~~~~l~HpnIv~~~g~~~~~~~~~iv~   78 (258)
T d1k2pa_           2 DPKDLTFLKELGTGQFGVVKYGKW--RGQYDVAIKMIKEGSMSEDEFIEEA-KVMMNLSHEKLVQLYGVCTKQRPIFIIT   78 (258)
T ss_dssp             CCCCCCCCCCCCEETTEEEEEEEE--TTTEEEEEEEEESSSSCHHHHHHHH-HHHHTCCCTTBCCEEEEECCSSSEEEEE
T ss_pred             ChHHCEEeEEEecCCCeEEEEEEE--CCCCEEEEEEECcCcCCHHHHHHHH-HHHHhcCCCceeeEEEEEeeCCceEEEE
Confidence            346899999999999999999995  4678999999987665555554444 3345567899999999988889999999


Q ss_pred             EecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeeccCCCCCcccCC
Q 018699          126 DYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSGPWQDQG  205 (351)
Q Consensus       126 e~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~~~~~~~~~~  205 (351)
                      ||+++|+|.+++...   ...+++..+..++.|++.|++|||++||+||||||+||+++                 .++.
T Consensus        79 Ey~~~g~l~~~~~~~---~~~~~~~~~~~i~~qi~~gl~~LH~~~iiH~dlk~~Nill~-----------------~~~~  138 (258)
T d1k2pa_          79 EYMANGCLLNYLREM---RHRFQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARNCLVN-----------------DQGV  138 (258)
T ss_dssp             ECCTTEEHHHHHHSG---GGCCCHHHHHHHHHHHHHHHHHHHHTTBCCSCCSGGGEEEC-----------------TTCC
T ss_pred             EccCCCcHHHhhhcc---ccCCcHHHHHHHHHHHHHHHHHHhhcCcccccccceeEEEc-----------------CCCc
Confidence            999999999997764   46788999999999999999999999999999999999999                 7788


Q ss_pred             eEEeecCCccccccCCCCccccccccCCCcccceeccCCCCCccchHhHHHHHHHHHHh-CccccccccCCCCCcee-ee
Q 018699          206 LCLVDWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQEKKPWKFQVDTYGLCAIVHMMLH-NSYMEIEKKASPDGGLV-YL  283 (351)
Q Consensus       206 ~~l~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~-g~~p~~~~~~~~~~~~~-~~  283 (351)
                      +||+|||++...... .........+|+.|+|||++.+..++.++|||||||++|||++ |+.||...+.......+ ..
T Consensus       139 ~kl~DfG~a~~~~~~-~~~~~~~~~~t~~y~aPE~~~~~~~~~ksDiwS~G~~l~el~t~g~~Pf~~~~~~~~~~~i~~~  217 (258)
T d1k2pa_         139 VKVSDFGLSRYVLDD-EYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQG  217 (258)
T ss_dssp             EEECCCSSCCBCSSS-SCCCCCCSCCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTSCHHHHHHHHHTT
T ss_pred             EEECcchhheeccCC-CceeecccCCCCCcCCcHHhcCCCCCcceeecccchhhHhHHhcCCCCCCCCCHHHHHHHHHhC
Confidence            999999999754322 2223334568999999999999999999999999999999998 89998754432111100 11


Q ss_pred             cCcchhhhhHHHHHHHHHHHHhcCCCCCChHHHHHHHHH
Q 018699          284 PKLSFKRYWKVELWKSLFTNLLNMSSGNDKEVLQNLQKS  322 (351)
Q Consensus       284 ~~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~~~  322 (351)
                      .....|...+ +.+.+||.+||+.||++|||+.++++|-
T Consensus       218 ~~~~~p~~~~-~~l~~li~~cl~~dP~~RPt~~eil~~L  255 (258)
T d1k2pa_         218 LRLYRPHLAS-EKVYTIMYSCWHEKADERPTFKILLSNI  255 (258)
T ss_dssp             CCCCCCTTCC-HHHHHHHHHTTCSSGGGSCCHHHHHHHH
T ss_pred             CCCCCccccc-HHHHHHHHHHccCCHhHCcCHHHHHHHh
Confidence            2223344444 7899999999999999999999999983

>d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Focal adhesion kinase 1 (fak)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.5e-48  Score=342.25  Aligned_cols=256  Identities=14%  Similarity=0.105  Sum_probs=191.1

Q ss_pred             EEEcCeeEEEEEEeeccCceEEEEEEecCC--CCceEEEEecCCCCChH-HHHHHHHHhhhccccccccccceeeecccC
Q 018699           43 IEIGGKKYQIKGCAGQGGFAKVFKAYVNGD--PEDVVALKIQKPAFPWE-FYMYRQLDQRISGRERSSFGFAHRIHLYSD  119 (351)
Q Consensus        43 ~~i~~~~Y~i~~~lg~G~~g~V~~a~~~~~--~~~~vaiK~~~~~~~~e-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  119 (351)
                      ++|..++|++.+.||+|+||+||+|++...  .+..||||.+....... ...+...........|++++.+.+++. .+
T Consensus         2 ~ei~~~~~~l~~~iG~G~fg~Vy~a~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~-~~   80 (273)
T d1mp8a_           2 YEIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVIT-EN   80 (273)
T ss_dssp             CBCCGGGEEEEEEEEECSSSEEEEEEECCC--CCEEEEEEECTTTTSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEC-SS
T ss_pred             CCcCHHHeEEEEEEeeCCCcEEEEEEEecCCceeEEEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEe-cC
Confidence            356678999999999999999999986332  34578999886544332 222333334455668899999888775 56


Q ss_pred             eeEEEEEecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeeccCCCC
Q 018699          120 YSILVCDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSG  199 (351)
Q Consensus       120 ~~~lv~e~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~~~~  199 (351)
                      .+|+||||+++|+|.+++...   ...+++..++.++.||+.||.|||+++|+||||||+||+++               
T Consensus        81 ~~~iv~E~~~~g~l~~~~~~~---~~~l~~~~~~~~~~qi~~gl~ylH~~~iiHrDlKp~NIll~---------------  142 (273)
T d1mp8a_          81 PVWIIMELCTLGELRSFLQVR---KYSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVS---------------  142 (273)
T ss_dssp             SCEEEEECCTTEEHHHHHHHT---TTTSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEE---------------
T ss_pred             eEEEEEEeccCCcHHhhhhcc---CCCCCHHHHHHHHHHHHHHhhhhcccCeeccccchhheeec---------------
Confidence            789999999999999987764   46799999999999999999999999999999999999999               


Q ss_pred             CcccCCeEEeecCCccccccCCCCccccccccCCCcccceeccCCCCCccchHhHHHHHHHHHHh-CccccccccCCCCC
Q 018699          200 PWQDQGLCLVDWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQEKKPWKFQVDTYGLCAIVHMMLH-NSYMEIEKKASPDG  278 (351)
Q Consensus       200 ~~~~~~~~l~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~-g~~p~~~~~~~~~~  278 (351)
                        .++.+||+|||++...... .........||+.|+|||++.+..++.++|||||||++|+|++ |.+||.........
T Consensus       143 --~~~~~Kl~DfG~a~~~~~~-~~~~~~~~~gt~~y~apE~l~~~~~~~~~DiwSlGvil~e~lt~g~~P~~~~~~~~~~  219 (273)
T d1mp8a_         143 --SNDCVKLGDFGLSRYMEDS-TYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVI  219 (273)
T ss_dssp             --ETTEEEECC--------------------CCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHH
T ss_pred             --CCCcEEEccchhheeccCC-cceeccceecCcccchhhHhccCCCCCccccccchHHHHHHHhcCCCCCCCCCHHHHH
Confidence              7778999999998754321 1122334567899999999999999999999999999999998 88888765443111


Q ss_pred             ce-eeecCcchhhhhHHHHHHHHHHHHhcCCCCCChHHHHHHHH
Q 018699          279 GL-VYLPKLSFKRYWKVELWKSLFTNLLNMSSGNDKEVLQNLQK  321 (351)
Q Consensus       279 ~~-~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~~  321 (351)
                      .. ......+.+..++ +.+.+||.+||+.||++|||+.|++.+
T Consensus       220 ~~i~~~~~~~~~~~~~-~~~~~li~~cl~~dp~~Rps~~ei~~~  262 (273)
T d1mp8a_         220 GRIENGERLPMPPNCP-PTLYSLMTKCWAYDPSRRPRFTELKAQ  262 (273)
T ss_dssp             HHHHTTCCCCCCTTCC-HHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             HHHHcCCCCCCCCCCC-HHHHHHHHHHcCCCHhHCcCHHHHHHH
Confidence            11 1112234445555 889999999999999999999999876

>d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase ZAP-70
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.1e-48  Score=344.32  Aligned_cols=260  Identities=11%  Similarity=0.039  Sum_probs=197.1

Q ss_pred             EcCeeEEEEEE-eeccCceEEEEEEecC-CCCceEEEEecCCCCChH-HHHHHHHHhhhccccccccccceeeecccCee
Q 018699           45 IGGKKYQIKGC-AGQGGFAKVFKAYVNG-DPEDVVALKIQKPAFPWE-FYMYRQLDQRISGRERSSFGFAHRIHLYSDYS  121 (351)
Q Consensus        45 i~~~~Y~i~~~-lg~G~~g~V~~a~~~~-~~~~~vaiK~~~~~~~~e-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  121 (351)
                      +..++|.+.+. ||+|+||+||+|.+.. .++..||||++......+ ...+......+....|++++.+.++... +.+
T Consensus         5 l~~~~~~~~~~~iG~G~fg~Vy~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~g~~~~-~~~   83 (285)
T d1u59a_           5 LKRDNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQA-EAL   83 (285)
T ss_dssp             CCGGGEEEEEEEEECCTTEEEEEEEEC---CCEEEEEEEECSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEES-SSE
T ss_pred             ecccCeEECCcEEecccCeEEEEEEEecCCCcEEEEEEEEChhcCHHHHHHHHHHHHHHHhCCCCCEeeEeeeecc-CeE
Confidence            45678999885 9999999999998532 345689999987654332 2222222233445678899988887754 567


Q ss_pred             EEEEEecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeeccCCCCCc
Q 018699          122 ILVCDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSGPW  201 (351)
Q Consensus       122 ~lv~e~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~~~~~~  201 (351)
                      |+||||+++|+|.+++...   +..+++..+..++.||+.||+|||++||+||||||+||+++                 
T Consensus        84 ~lvmE~~~~g~L~~~l~~~---~~~l~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~Nill~-----------------  143 (285)
T d1u59a_          84 MLVMEMAGGGPLHKFLVGK---REEIPVSNVAELLHQVSMGMKYLEEKNFVHRDLAARNVLLV-----------------  143 (285)
T ss_dssp             EEEEECCTTEEHHHHHTTC---TTTSCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEE-----------------
T ss_pred             EEEEEeCCCCcHHHHhhcc---ccCCCHHHHHHHHHHHHHHHHHHHhCCeecCcCchhheeec-----------------
Confidence            9999999999999987653   46799999999999999999999999999999999999999                 


Q ss_pred             ccCCeEEeecCCccccccCCCC-ccccccccCCCcccceeccCCCCCccchHhHHHHHHHHHHh-CccccccccCCCCCc
Q 018699          202 QDQGLCLVDWGRGIDLHLFPDN-MEFEGDCRTSGFRCIEMQEKKPWKFQVDTYGLCAIVHMMLH-NSYMEIEKKASPDGG  279 (351)
Q Consensus       202 ~~~~~~l~Dfg~a~~~~~~~~~-~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~-g~~p~~~~~~~~~~~  279 (351)
                      .++.+||+|||++......... .......||+.|+|||++.+..++.++||||+||++|||++ |..||..........
T Consensus       144 ~~~~~Kl~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDVwS~Gv~l~E~lt~G~~Pf~~~~~~~~~~  223 (285)
T d1u59a_         144 NRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEVMA  223 (285)
T ss_dssp             ETTEEEECCCTTCEECTTCSCEECCCCSSCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCTHHHHH
T ss_pred             cCCceeeccchhhhcccccccccccccccccCccccChHHHhCCCCCccchhhcchHHHHHHHhCCCCCCCCCCHHHHHH
Confidence            7778999999999765432211 11234468899999999998899999999999999999998 899997544321101


Q ss_pred             ee-eecCcchhhhhHHHHHHHHHHHHhcCCCCCChHHHHHH---HHHHHHH
Q 018699          280 LV-YLPKLSFKRYWKVELWKSLFTNLLNMSSGNDKEVLQNL---QKSFQDY  326 (351)
Q Consensus       280 ~~-~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l---~~~~~~~  326 (351)
                      .+ .....+.|..++ +.+.+||.+||+.||++|||+.+++   +++|.+.
T Consensus       224 ~i~~~~~~~~p~~~~-~~l~~li~~cl~~~p~~RPs~~~i~~~L~~~~~~~  273 (285)
T d1u59a_         224 FIEQGKRMECPPECP-PELYALMSDCWIYKWEDRPDFLTVEQRMRACYYSL  273 (285)
T ss_dssp             HHHTTCCCCCCTTCC-HHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred             HHHcCCCCCCCCcCC-HHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHHHHh
Confidence            01 112233445555 8899999999999999999988875   4555443

>d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: (Plasmodium falciparum) [TaxId: 5833]

Probab=100.00  E-value=1.5e-47  Score=338.39  Aligned_cols=251  Identities=19%  Similarity=0.202  Sum_probs=191.3

Q ss_pred             eeEEEEEEeeccCceEEEEEEecCCCCceEEEEecCCCCChH--HHHHHHHHhhhccccccccccceeeecccCeeEEEE
Q 018699           48 KKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFPWE--FYMYRQLDQRISGRERSSFGFAHRIHLYSDYSILVC  125 (351)
Q Consensus        48 ~~Y~i~~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~~~e--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~  125 (351)
                      ++|++.++||+|+||+||+|++  .+|+.||||++......+  ...+...........|++++.....+...+..+++|
T Consensus         2 ~~Y~~~~~iG~G~fg~Vy~~~~--~~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~i~~   79 (286)
T d1ob3a_           2 EKYHGLEKIGEGTYGVVYKAQN--NYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVIHTKKRLVLVF   79 (286)
T ss_dssp             CSEEEEEEEEEETTEEEEEEEE--TTSCEEEEEEECCSSGGGCCCHHHHHHHHGGGGCCCTTBCCEEEEEECSSCEEEEE
T ss_pred             CCceeccEEecCCCcEEEEEEe--CCCCEEEEEEEehhhcChHHHHHHHHHHHHHHhCCCCcEEeeeeecccCCceeEEE
Confidence            5899999999999999999995  467999999987654322  122222223345567899999999999999999999


Q ss_pred             EecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeeccCCCCCcccCC
Q 018699          126 DYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSGPWQDQG  205 (351)
Q Consensus       126 e~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~~~~~~~~~~  205 (351)
                      |++.++.+..+...    ...+++..++.++.||+.||.|||++||+||||||+||+++                 .++.
T Consensus        80 e~~~~~~~~~~~~~----~~~l~~~~~~~i~~qi~~~L~~LH~~~IvHrDiKp~NIll~-----------------~~~~  138 (286)
T d1ob3a_          80 EHLDQDLKKLLDVC----EGGLESVTAKSFLLQLLNGIAYCHDRRVLHRDLKPQNLLIN-----------------REGE  138 (286)
T ss_dssp             ECCSEEHHHHHHTS----TTCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEC-----------------TTSC
T ss_pred             EeehhhhHHHHHhh----cCCcchhhhHHHHHHHHHHHHHhccCcEEecCCCCceeeEc-----------------CCCC
Confidence            99976666665554    57899999999999999999999999999999999999999                 7788


Q ss_pred             eEEeecCCccccccCCCCccccccccCCCcccceeccC-CCCCccchHhHHHHHHHHHHhCccccccccCC---------
Q 018699          206 LCLVDWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQEK-KPWKFQVDTYGLCAIVHMMLHNSYMEIEKKAS---------  275 (351)
Q Consensus       206 ~~l~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~~DiwslG~il~~l~~g~~p~~~~~~~---------  275 (351)
                      +||+|||.+.....  .........+++.|+|||.+.+ ..++.++|||||||++|+|++|++||...+..         
T Consensus       139 ~kl~DfG~a~~~~~--~~~~~~~~~~~~~y~~pE~~~~~~~~~~~~DiwslGv~l~el~~G~~pf~~~~~~~~~~~i~~~  216 (286)
T d1ob3a_         139 LKIADFGLARAFGI--PVRKYTHEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRI  216 (286)
T ss_dssp             EEECCTTHHHHHCC-----------CCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHH
T ss_pred             EEecccccceeccc--CccccceecccchhhhHHHHhCCCCCCcceeehhcCcHHHHHHHCCCCCCCCCHHHHHHHHHHh
Confidence            99999999865432  2223344568999999999865 45689999999999999999999998543210         


Q ss_pred             -----------------CCCcee---eecCcchhhhhHHHHHHHHHHHHhcCCCCCChHHHHHHHHHHH
Q 018699          276 -----------------PDGGLV---YLPKLSFKRYWKVELWKSLFTNLLNMSSGNDKEVLQNLQKSFQ  324 (351)
Q Consensus       276 -----------------~~~~~~---~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~~~~~  324 (351)
                                       ......   ..+.......++ +.+.+||++||++||++|||+.|+|+|||.
T Consensus       217 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s-~~~~dli~~~L~~dP~~R~s~~ell~Hp~f  284 (286)
T d1ob3a_         217 LGTPNSKNWPNVTELPKYDPNFTVYEPLPWESFLKGLD-ESGIDLLSKMLKLDPNQRITAKQALEHAYF  284 (286)
T ss_dssp             HCCCCTTTSTTGGGSTTCCTTCCCCCCCCGGGTCCSCC-HHHHHHHHHHTCSSTTTSCCHHHHHTSGGG
T ss_pred             hCCCChhhccchhhhhhcccccccccCcchhhhcccCC-HHHHHHHHHHccCChhHCcCHHHHhcCccc
Confidence                             000000   011112223344 789999999999999999999999999863

>d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: epha2 receptor tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.9e-47  Score=336.77  Aligned_cols=256  Identities=11%  Similarity=0.097  Sum_probs=190.5

Q ss_pred             EEcCeeEEEEEEeeccCceEEEEEEecCCCC---ceEEEEecCCCCChHH-HHHHHHHhhhccccccccccceeeecccC
Q 018699           44 EIGGKKYQIKGCAGQGGFAKVFKAYVNGDPE---DVVALKIQKPAFPWEF-YMYRQLDQRISGRERSSFGFAHRIHLYSD  119 (351)
Q Consensus        44 ~i~~~~Y~i~~~lg~G~~g~V~~a~~~~~~~---~~vaiK~~~~~~~~e~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  119 (351)
                      +|..+.|++.+.||+|+||+||+|.++..++   ..||||++........ ..+...........|++++.+.++....+
T Consensus         3 ei~~~~~~~~~~iG~G~fG~Vy~~~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~il~~l~H~nIv~~~g~~~~~~   82 (283)
T d1mqba_           3 EIHPSCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRLEGVISKYK   82 (283)
T ss_dssp             BCCTTTEEEEEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSS
T ss_pred             cCCHHHeEeeeEEeeCCCeEEEEEEEeCCCCEEEEEEEEEEECcccChHHHHHHHHHHHHHHhcCCCCEeeeeEEEecCC
Confidence            4556789999999999999999999643332   4799999876544322 11222223445567899999999988889


Q ss_pred             eeEEEEEecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeeccCCCC
Q 018699          120 YSILVCDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSG  199 (351)
Q Consensus       120 ~~~lv~e~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~~~~  199 (351)
                      ..++||||+.++++.+.+...   ...+++..+..++.||+.|+.|||+++|+||||||+||+++               
T Consensus        83 ~~~~v~e~~~~~~l~~~~~~~---~~~~~~~~~~~i~~~i~~gl~~lH~~~iiHrDlKp~NILl~---------------  144 (283)
T d1mqba_          83 PMMIITEYMENGALDKFLREK---DGEFSVLQLVGMLRGIAAGMKYLANMNYVHRDLAARNILVN---------------  144 (283)
T ss_dssp             SEEEEEECCTTEEHHHHHHHT---TTCSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEC---------------
T ss_pred             ceEEEEEecccCcchhhhhcc---cccccHHHHHHHHHHHHHhhhhccccccccCccccceEEEC---------------
Confidence            999999999999999988764   46799999999999999999999999999999999999999               


Q ss_pred             CcccCCeEEeecCCccccccCCCCc-cccccccCCCcccceeccCCCCCccchHhHHHHHHHHHHhCccccccccCCCC-
Q 018699          200 PWQDQGLCLVDWGRGIDLHLFPDNM-EFEGDCRTSGFRCIEMQEKKPWKFQVDTYGLCAIVHMMLHNSYMEIEKKASPD-  277 (351)
Q Consensus       200 ~~~~~~~~l~Dfg~a~~~~~~~~~~-~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~p~~~~~~~~~-  277 (351)
                        .++.+||+|||+++......... ......||+.|+|||++.+..++.++|||||||++|||++|..|+........ 
T Consensus       145 --~~~~~Kl~DFGla~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~~~~~sDI~S~Gvil~el~t~~~~~~~~~~~~~~  222 (283)
T d1mqba_         145 --SNLVCKVSDFGLSRVLEDDPEATYTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWELSNHEV  222 (283)
T ss_dssp             --TTCCEEECCCCC-----------------CCCGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHH
T ss_pred             --CCCeEEEcccchhhcccCCCccceEeccCCCCccccCHHHHccCCCCCcccccccHHHHHHHHhCCCCccccCCHHHH
Confidence              78889999999997543222211 22344678999999999999999999999999999999997666543221100 


Q ss_pred             -CceeeecCcchhhhhHHHHHHHHHHHHhcCCCCCChHHHHHHH
Q 018699          278 -GGLVYLPKLSFKRYWKVELWKSLFTNLLNMSSGNDKEVLQNLQ  320 (351)
Q Consensus       278 -~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~  320 (351)
                       .........+.+..++ +.+.+||.+||+.||++||++.|++.
T Consensus       223 ~~~i~~~~~~~~~~~~~-~~l~~li~~cl~~~p~~RPt~~eil~  265 (283)
T d1mqba_         223 MKAINDGFRLPTPMDCP-SAIYQLMMQCWQQERARRPKFADIVS  265 (283)
T ss_dssp             HHHHHTTCCCCCCTTCB-HHHHHHHHHHTCSSTTTSCCHHHHHH
T ss_pred             HHHHhccCCCCCchhhH-HHHHHHHHHHCcCCHhHCcCHHHHHH
Confidence             0000111223334444 78999999999999999999999876

>d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-src tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.3e-47  Score=337.15  Aligned_cols=260  Identities=13%  Similarity=0.143  Sum_probs=195.4

Q ss_pred             EEEEcCeeEEEEEEeeccCceEEEEEEecCCCCceEEEEecCCCCChHHHHHHHHHhhhccccccccccceeeecccCee
Q 018699           42 TIEIGGKKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFPWEFYMYRQLDQRISGRERSSFGFAHRIHLYSDYS  121 (351)
Q Consensus        42 ~~~i~~~~Y~i~~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  121 (351)
                      .++|..++|++.+.||+|+||+||+|++ .. ++.||||++...........+++ .......|++++.+.++.. .+..
T Consensus        11 ~~~i~~~~~~i~~~iG~G~fg~Vy~~~~-~~-~~~vAiK~l~~~~~~~~~~~~E~-~~l~~l~h~nIv~~~g~~~-~~~~   86 (285)
T d1fmka3          11 AWEIPRESLRLEVKLGQGCFGEVWMGTW-NG-TTRVAIKTLKPGTMSPEAFLQEA-QVMKKLRHEKLVQLYAVVS-EEPI   86 (285)
T ss_dssp             CSBCCGGGEEEEEEEEECSSCEEEEEEE-TT-TEEEEEEECCTTSSCHHHHHHHH-HHHHHCCCTTBCCEEEEEC-SSSC
T ss_pred             ceEcCHHHEEEeeEEeeCCCeEEEEEEE-CC-CCEEEEEEECcccCCHHHHHHHH-HHHHhcccCCEeEEEEEEe-cCCe
Confidence            3456678999999999999999999995 33 35799999987655544443333 3445667889999888775 4567


Q ss_pred             EEEEEecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeeccCCCCCc
Q 018699          122 ILVCDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSGPW  201 (351)
Q Consensus       122 ~lv~e~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~~~~~~  201 (351)
                      ++||||+++|+|..++....  +..+++..++.++.||+.|++|||++||+||||||+||+++                 
T Consensus        87 ~lv~Ey~~~g~l~~~~~~~~--~~~l~~~~~~~i~~~i~~gl~~LH~~~ivH~DlKp~NIll~-----------------  147 (285)
T d1fmka3          87 YIVTEYMSKGSLLDFLKGET--GKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVG-----------------  147 (285)
T ss_dssp             EEEECCCTTCBHHHHHSHHH--HTTCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEC-----------------
T ss_pred             EEEEEecCCCchhhhhhhcc--cccchHHHHHHHHHHHHHHHHHHhhhheecccccceEEEEC-----------------
Confidence            89999999999998886543  35689999999999999999999999999999999999999                 


Q ss_pred             ccCCeEEeecCCccccccCCCCccccccccCCCcccceeccCCCCCccchHhHHHHHHHHHHhCccccccccCCCC--Cc
Q 018699          202 QDQGLCLVDWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQEKKPWKFQVDTYGLCAIVHMMLHNSYMEIEKKASPD--GG  279 (351)
Q Consensus       202 ~~~~~~l~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~p~~~~~~~~~--~~  279 (351)
                      .++.+||+|||++..... ..........||+.|+|||.+.+..++.++||||+||++|+|++|..|+........  ..
T Consensus       148 ~~~~~kl~DfGla~~~~~-~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDI~S~Giil~el~t~~~p~~~~~~~~~~~~~  226 (285)
T d1fmka3         148 ENLVCKVADFGLARLIED-NEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQ  226 (285)
T ss_dssp             GGGCEEECCCCTTC---------------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHH
T ss_pred             CCCcEEEcccchhhhccC-CCceeeccccccccccChHHHhCCCCCcHHhhhcchHHHHHHHhCCCCCCCCCCHHHHHHH
Confidence            778899999999965421 112223445689999999999999999999999999999999997666543322100  00


Q ss_pred             eeeecCcchhhhhHHHHHHHHHHHHhcCCCCCChHHHHHHHHHHHHHH
Q 018699          280 LVYLPKLSFKRYWKVELWKSLFTNLLNMSSGNDKEVLQNLQKSFQDYL  327 (351)
Q Consensus       280 ~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~~~~~~~~  327 (351)
                      .......+.+..++ +.+++||.+||+.||++||++.+++. .+++++
T Consensus       227 i~~~~~~~~~~~~~-~~l~~li~~cl~~dP~~Rps~~~i~~-~L~~~~  272 (285)
T d1fmka3         227 VERGYRMPCPPECP-ESLHDLMCQCWRKEPEERPTFEYLQA-FLEDYF  272 (285)
T ss_dssp             HHTTCCCCCCTTSC-HHHHHHHHHHTCSSGGGSCCHHHHHH-HHHTTT
T ss_pred             HHhcCCCCCCcccC-HHHHHHHHHHcccCHhHCcCHHHHHH-HHhhhh
Confidence            00112233445555 88999999999999999999999864 444444

>d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=100.00  E-value=2.4e-46  Score=332.66  Aligned_cols=256  Identities=15%  Similarity=0.185  Sum_probs=190.1

Q ss_pred             CeeEEEEEEeeccCceEEEEEEecCCCCceEEEEecCCCCCh-HHHHHHHHHhhhccccccccccceeeecccCeeEEEE
Q 018699           47 GKKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFPW-EFYMYRQLDQRISGRERSSFGFAHRIHLYSDYSILVC  125 (351)
Q Consensus        47 ~~~Y~i~~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~~~-e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~  125 (351)
                      |++|++.+.||+|+||+||+|+ +..+|+.||||++...... +......+...  ...++++.....+...++..++||
T Consensus         6 g~rY~l~~~iG~G~fG~Vy~a~-~~~~~~~vAvK~~~~~~~~~~~~~E~~i~~~--l~~~~~i~~~~~~~~~~~~~~ivm   82 (299)
T d1ckia_           6 GNRYRLGRKIGSGSFGDIYLGT-DIAAGEEVAIKLECVKTKHPQLHIESKIYKM--MQGGVGIPTIRWCGAEGDYNVMVM   82 (299)
T ss_dssp             TTTEEEEEEEEECSSSEEEEEE-ETTTTEEEEEEEEESCTTSCCHHHHHHHHHH--STTSTTCCCEEEEEEETTEEEEEE
T ss_pred             CCEEEEeEEEeeCCCcEEEEEE-ECCCCCEEEEEEEchhccCHHHHHHHHHHHH--ccCCCcccEEEEEEecCCEEEEEE
Confidence            5789999999999999999999 5678899999987654322 22222222221  223445566666667788899999


Q ss_pred             EecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeeccCCCCCcccCC
Q 018699          126 DYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSGPWQDQG  205 (351)
Q Consensus       126 e~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~~~~~~~~~~  205 (351)
                      ||+ +++|...+...   +..+++..+..++.|++.||+|||++||+||||||+||+++..+              .+..
T Consensus        83 e~~-~~~l~~~~~~~---~~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDiKp~NIl~~~~~--------------~~~~  144 (299)
T d1ckia_          83 ELL-GPSLEDLFNFC---SRKFSLKTVLLLADQMISRIEYIHSKNFIHRDVKPDNFLMGLGK--------------KGNL  144 (299)
T ss_dssp             ECC-CCBHHHHHHHT---TTCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECCGG--------------GTTC
T ss_pred             EEc-CCchhhhhhhc---cCCCcHHHHHHHHHHHHHHHHHHHHCCeeeccCCHhhccccccC--------------CCce
Confidence            999 67877776654   56899999999999999999999999999999999999987433              3457


Q ss_pred             eEEeecCCccccccCCCC-----ccccccccCCCcccceeccCCCCCccchHhHHHHHHHHHHhCccccccccCCCCCce
Q 018699          206 LCLVDWGRGIDLHLFPDN-----MEFEGDCRTSGFRCIEMQEKKPWKFQVDTYGLCAIVHMMLHNSYMEIEKKASPDGGL  280 (351)
Q Consensus       206 ~~l~Dfg~a~~~~~~~~~-----~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~p~~~~~~~~~~~~  280 (351)
                      ++|+|||+|.........     .......||+.|+|||++.+..++.++|||||||++|+|++|..||...........
T Consensus       145 vkl~DFG~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~~l~el~tg~~P~~~~~~~~~~~~  224 (299)
T d1ckia_         145 VYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQK  224 (299)
T ss_dssp             EEECCCSSCEECBCTTTCCBCCCCBCCSCCCCSSSCCHHHHTTBCCCHHHHHHHHHHHHHHHHHSSCTTCCCC-------
T ss_pred             eeeeccCcceeccccccccceeccccCCcCCCccccCHHHHhCCCCCChhhEEecCHHHHHHHhCCCcccccchHHHHHH
Confidence            999999999765422211     123455799999999999999999999999999999999999999976544322111


Q ss_pred             ee--------ecCcchhhhhHHHHHHHHHHHHhcCCCCCChHHHH---HHHHHHH
Q 018699          281 VY--------LPKLSFKRYWKVELWKSLFTNLLNMSSGNDKEVLQ---NLQKSFQ  324 (351)
Q Consensus       281 ~~--------~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~e---~l~~~~~  324 (351)
                      ..        .+.......++ +.+.+||.+||+.||++||++.+   +|+++|.
T Consensus       225 ~~~~~~~~~~~~~~~~~~~~p-~~~~~li~~cl~~~p~~RP~~~~i~~~l~~~~~  278 (299)
T d1ckia_         225 YERISEKKMSTPIEVLCKGYP-SEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFH  278 (299)
T ss_dssp             HHHHHHHHHHSCHHHHTTTSC-HHHHHHHHHHHHSCTTCCCCHHHHHHHHHHHHH
T ss_pred             HHHhhcccCCCChhHhccCCC-HHHHHHHHHHccCChhHCcCHHHHHHHHHHHHH
Confidence            10        11111222334 78999999999999999998764   4556654

>d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: EGF receptor tyrosine kinase, Erbb-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=4.9e-47  Score=339.50  Aligned_cols=253  Identities=14%  Similarity=0.128  Sum_probs=190.3

Q ss_pred             cCeeEEEEEEeeccCceEEEEEEecCCCCc----eEEEEecCCCCC--hHHHHHHHHHhhhccccccccccceeeecccC
Q 018699           46 GGKKYQIKGCAGQGGFAKVFKAYVNGDPED----VVALKIQKPAFP--WEFYMYRQLDQRISGRERSSFGFAHRIHLYSD  119 (351)
Q Consensus        46 ~~~~Y~i~~~lg~G~~g~V~~a~~~~~~~~----~vaiK~~~~~~~--~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  119 (351)
                      ...+|++.+.||+|+||+||+|.+ ..+|+    .||+|.+.....  ......+++ .......|++++.+.+++..+ 
T Consensus         7 k~~dy~~~~~lG~G~fG~Vy~~~~-~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~-~~l~~l~HpnIv~l~g~~~~~-   83 (317)
T d1xkka_           7 KETEFKKIKVLGSGAFGTVYKGLW-IPEGEKVKIPVAIKELREATSPKANKEILDEA-YVMASVDNPHVCRLLGICLTS-   83 (317)
T ss_dssp             CTTTEEEEEEEEECSSEEEEEEEE-CC----CCEEEEEEEECC----CTHHHHHHHH-HHHHHCCCTTBCCEEEEEESS-
T ss_pred             CHHHCEEeeEEecCCCeEEEEEEE-cCCCCEEEEEEEEEEeccccCHHHHHHHHHHH-HHHHhCCCCCEeeEEEEEecC-
Confidence            345799999999999999999995 44444    688888764322  122222222 334455788999988887654 


Q ss_pred             eeEEEEEecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeeccCCCC
Q 018699          120 YSILVCDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSG  199 (351)
Q Consensus       120 ~~~lv~e~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~~~~  199 (351)
                      ..++++|++.+++|.+.+...   ...+++..++.++.||+.||.|||++||+||||||+||+++               
T Consensus        84 ~~~~v~e~~~~~~l~~~~~~~---~~~~~~~~~~~i~~qi~~gl~yLH~~~iiHrDlKp~NIll~---------------  145 (317)
T d1xkka_          84 TVQLITQLMPFGCLLDYVREH---KDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVK---------------  145 (317)
T ss_dssp             SEEEEEECCTTCBHHHHHHHT---SSSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEE---------------
T ss_pred             CeeEEEEeccCCccccccccc---ccCCCHHHHHHHHHHHHHHHHHHHHcCcccCcchhhcceeC---------------
Confidence            557788999999999988764   57899999999999999999999999999999999999999               


Q ss_pred             CcccCCeEEeecCCccccccCCCCccccccccCCCcccceeccCCCCCccchHhHHHHHHHHHHh-CccccccccCCCCC
Q 018699          200 PWQDQGLCLVDWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQEKKPWKFQVDTYGLCAIVHMMLH-NSYMEIEKKASPDG  278 (351)
Q Consensus       200 ~~~~~~~~l~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~-g~~p~~~~~~~~~~  278 (351)
                        .++.+||+|||+|................||+.|+|||++.+..++.++|||||||++|||+| |.+||.........
T Consensus       146 --~~~~~kl~DFGla~~~~~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~sDvwS~Gvil~el~t~g~~p~~~~~~~~~~  223 (317)
T d1xkka_         146 --TPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEIS  223 (317)
T ss_dssp             --ETTEEEECCCSHHHHTTTTCC--------CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTSCGGGHH
T ss_pred             --CCCCeEeeccccceecccccccccccccccCccccChHHHhcCCCChhhhhhhHHHHHHHHHHCCCCCCCCCCHHHHH
Confidence              777899999999976543333333344568999999999999999999999999999999998 78888654432111


Q ss_pred             cee-eecCcchhhhhHHHHHHHHHHHHhcCCCCCChHHHHHHHHH
Q 018699          279 GLV-YLPKLSFKRYWKVELWKSLFTNLLNMSSGNDKEVLQNLQKS  322 (351)
Q Consensus       279 ~~~-~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~~~  322 (351)
                      ... .....+.|..++ +.+.+||.+||..||++|||+.|++.+.
T Consensus       224 ~~i~~~~~~~~p~~~~-~~~~~li~~cl~~dP~~RPs~~eil~~l  267 (317)
T d1xkka_         224 SILEKGERLPQPPICT-IDVYMIMVKCWMIDADSRPKFRELIIEF  267 (317)
T ss_dssp             HHHHHTCCCCCCTTBC-HHHHHHHHHHTCSSGGGSCCHHHHHHHH
T ss_pred             HHHHcCCCCCCCcccC-HHHHHHHHHhCCCChhhCcCHHHHHHHH
Confidence            111 112234445555 8899999999999999999999999874

>d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38-gamma
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=7.4e-47  Score=342.79  Aligned_cols=249  Identities=19%  Similarity=0.214  Sum_probs=187.5

Q ss_pred             CeeEEEEEEeeccCceEEEEEEecCCCCceEEEEecCCCCChHHHHHH--HHHhhhccccccccccceeeecccC-----
Q 018699           47 GKKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFPWEFYMYR--QLDQRISGRERSSFGFAHRIHLYSD-----  119 (351)
Q Consensus        47 ~~~Y~i~~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~~~e~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~-----  119 (351)
                      .++|+++++||+|+||+||+|+ +..+|+.||||++.+....+.....  .....+....|++++....++...+     
T Consensus        17 ~~~Y~~i~~lG~G~fg~V~~~~-~~~~~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~hpniv~l~~~~~~~~~~~~~   95 (346)
T d1cm8a_          17 RAVYRDLQPVGSGAYGAVCSAV-DGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETLDDF   95 (346)
T ss_dssp             BSSEEEEEEC------CEEEEE-ETTTCCEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCBTTBCCCSEEECSCSSTTTC
T ss_pred             CCcEEEEEEEecCCCeEEEEEE-ECCCCCEEEEEEEchhhcChHHHHHHHHHHHHHHhcCCCCeeEEEEEeccCcccccc
Confidence            4789999999999999999999 5778999999999876544332211  1112234456788888777765433     


Q ss_pred             -eeEEEEEecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeeccCCC
Q 018699          120 -YSILVCDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRS  198 (351)
Q Consensus       120 -~~~lv~e~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~~~  198 (351)
                       .+|+||||+ +.+|..++..     ..+++..++.++.||+.||.|||++||+||||||+||+++              
T Consensus        96 ~~~~lv~e~~-~~~l~~~~~~-----~~l~~~~~~~~~~qi~~aL~~LH~~~IiHrDiKp~NIL~~--------------  155 (346)
T d1cm8a_          96 TDFYLVMPFM-GTDLGKLMKH-----EKLGEDRIQFLVYQMLKGLRYIHAAGIIHRDLKPGNLAVN--------------  155 (346)
T ss_dssp             CCCEEEEECC-SEEHHHHHHH-----CCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEC--------------
T ss_pred             ceEEEEEecc-cccHHHHHHh-----ccccHHHHHHHHHHHHHHHHHHHhCCCcccccCcchhhcc--------------
Confidence             579999999 7788887765     5799999999999999999999999999999999999999              


Q ss_pred             CCcccCCeEEeecCCccccccCCCCccccccccCCCcccceeccC-CCCCccchHhHHHHHHHHHHhCccccccccCCCC
Q 018699          199 GPWQDQGLCLVDWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQEK-KPWKFQVDTYGLCAIVHMMLHNSYMEIEKKASPD  277 (351)
Q Consensus       199 ~~~~~~~~~l~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~~DiwslG~il~~l~~g~~p~~~~~~~~~  277 (351)
                         .++.++++|||+|....     .......||+.|+|||++.+ ..++.++||||+||++|+|++|.+||...+....
T Consensus       156 ---~~~~~kl~Dfg~a~~~~-----~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlGvil~ell~g~~pf~~~~~~~~  227 (346)
T d1cm8a_         156 ---EDCELKILDFGLARQAD-----SEMTGYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLDQ  227 (346)
T ss_dssp             ---TTCCEEECCCTTCEECC-----SSCCSSCSCGGGCCTHHHHTTTCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHH
T ss_pred             ---cccccccccccceeccC-----CccccccccccccCHHHHcCCCCCCccchhhcchHHHHHHHHCcCCCCCCChHHH
Confidence               78889999999997543     23455679999999999876 4568999999999999999999999965432100


Q ss_pred             -------------------------------CceeeecCcchhhhhHHHHHHHHHHHHhcCCCCCChHHHHHHHHHHHH
Q 018699          278 -------------------------------GGLVYLPKLSFKRYWKVELWKSLFTNLLNMSSGNDKEVLQNLQKSFQD  325 (351)
Q Consensus       278 -------------------------------~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~~~~~~  325 (351)
                                                     ...............+ +.+.+||.+||.+||++|||+.|+|+|||..
T Consensus       228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s-~~~~dli~~mL~~dP~~R~ta~eiL~Hp~f~  305 (346)
T d1cm8a_         228 LKEIMKVTGTPPAEFVQRLQSDEAKNYMKGLPELEKKDFASILTNAS-PLAVNLLEKMLVLDAEQRVTAGEALAHPYFE  305 (346)
T ss_dssp             HHHHHHHHCCCCHHHHHTCSCHHHHHHHHHSCCCCCCCGGGTCTTCC-HHHHHHHHHHSCSSTTTSCCHHHHHHSGGGT
T ss_pred             HHHHHhccCCCcHHHHhhhcchhhhhhhccCCcccccchHHhccCCC-HHHHHHHHHHCcCChhHCcCHHHHhcChhhC
Confidence                                           0000000011112223 7889999999999999999999999998743

>d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fibroblast growth factor receptor 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.9e-47  Score=339.45  Aligned_cols=262  Identities=12%  Similarity=0.090  Sum_probs=200.0

Q ss_pred             EEEEcCeeEEEEEEeeccCceEEEEEEecC------CCCceEEEEecCCCCChH--HHHHHHHHhhhcccccccccccee
Q 018699           42 TIEIGGKKYQIKGCAGQGGFAKVFKAYVNG------DPEDVVALKIQKPAFPWE--FYMYRQLDQRISGRERSSFGFAHR  113 (351)
Q Consensus        42 ~~~i~~~~Y~i~~~lg~G~~g~V~~a~~~~------~~~~~vaiK~~~~~~~~e--~~~~~~~~~~~~~~~~~~~~~~~~  113 (351)
                      .++|..++|++.+.||+|+||.||+|++..      ..+..||||++.++....  .+...+.........|++++....
T Consensus         7 ~~~i~~~~~~l~~~iG~G~fg~Vy~~~~~~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~e~~~l~~~~~HpnIv~~~~   86 (299)
T d1fgka_           7 RWELPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLG   86 (299)
T ss_dssp             TTBCCGGGEEEEEECC-----CEEEEEEECC----CCCEEEEEEECCCTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEE
T ss_pred             cCcccHHHeEEeeEEeecCCcEEEEEEEcCCCcccccCceEEEEEEECcccChHHHHHHHHHHHHHHHhcCCCeEEeccc
Confidence            356778899999999999999999998532      223579999998765432  222223333333337899999999


Q ss_pred             eecccCeeEEEEEecCCCCHHHHHHHHHh------------hCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcE
Q 018699          114 IHLYSDYSILVCDYLSQGTLQDAINSYVV------------IGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNL  181 (351)
Q Consensus       114 ~~~~~~~~~lv~e~~~~~sL~~~l~~~~~------------~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Ni  181 (351)
                      ++..++..++||||+++|+|.+++.....            ....+++.+++.++.||+.||+|||+++|+||||||+||
T Consensus        87 ~~~~~~~~~~v~e~~~~g~l~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~ylH~~~ivHrDiKp~Ni  166 (299)
T d1fgka_          87 ACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNV  166 (299)
T ss_dssp             EECSSSSCEEEECCCTTCBHHHHHHTTSCC------------CCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGE
T ss_pred             ccccCCeEEEEEEccCCCcHHHHHHhhcCCccccccccccCccccCCHHHHHHHHHHHHHHHHHhhhCCEEeeeecccce
Confidence            99889999999999999999999975421            124589999999999999999999999999999999999


Q ss_pred             EEeecCCcceeeccCCCCCcccCCeEEeecCCccccccCCCCccccccccCCCcccceeccCCCCCccchHhHHHHHHHH
Q 018699          182 LIRYARDELTVLDHDRSGPWQDQGLCLVDWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQEKKPWKFQVDTYGLCAIVHM  261 (351)
Q Consensus       182 ll~~~~~~~~~~~~~~~~~~~~~~~~l~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~  261 (351)
                      +++                 .++.+||+|||++................+++.|+|||.+.+..|+.++|||||||++|+
T Consensus       167 Ll~-----------------~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~l~~~~y~~k~DiwS~Gvvl~e  229 (299)
T d1fgka_         167 LVT-----------------EDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWE  229 (299)
T ss_dssp             EEC-----------------TTCCEEECSTTCCCCGGGCCTTCCCTTSCCGGGGSCHHHHHHCCCCHHHHHHHHHHHHHH
T ss_pred             eec-----------------CCCCeEeccchhhccccccccccccccCCCChhhhhhhHhcCCCCCchhhhHHhHHHHHH
Confidence            999                 778899999999976554444444455678999999999999999999999999999999


Q ss_pred             HHh-CccccccccCCCCCce-eeecCcchhhhhHHHHHHHHHHHHhcCCCCCChHHHHHHHH
Q 018699          262 MLH-NSYMEIEKKASPDGGL-VYLPKLSFKRYWKVELWKSLFTNLLNMSSGNDKEVLQNLQK  321 (351)
Q Consensus       262 l~~-g~~p~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~~  321 (351)
                      |++ |.+||........... ......+.|..++ +.+.+||.+||++||++|||+.|+++.
T Consensus       230 ll~~g~~p~~~~~~~~~~~~i~~~~~~~~p~~~~-~~l~~li~~cl~~dP~~Rps~~eil~~  290 (299)
T d1fgka_         230 IFTLGGSPYPGVPVEELFKLLKEGHRMDKPSNCT-NELYMMMRDCWHAVPSQRPTFKQLVED  290 (299)
T ss_dssp             HHTTSCCSSTTCCHHHHHHHHHTTCCCCCCSSCC-HHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             hccCCCCCCCCCCHHHHHHHHHcCCCCCCCccch-HHHHHHHHHHccCCHhHCcCHHHHHHH
Confidence            998 6778764332210000 0112233444455 789999999999999999999999873

>d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Glycogen synthase kinase-3 beta (Gsk3b)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.4e-46  Score=339.68  Aligned_cols=248  Identities=20%  Similarity=0.237  Sum_probs=187.7

Q ss_pred             eEEEEEEeeccCceEEEEEEecCCCCceEEEEecCCCCC---hHHHHHHHHHhhhccccccccccceeeecc------cC
Q 018699           49 KYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFP---WEFYMYRQLDQRISGRERSSFGFAHRIHLY------SD  119 (351)
Q Consensus        49 ~Y~i~~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~~---~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~  119 (351)
                      +|+..++||+|+||+||+|+ +..+|+.||||++..+..   .|..+++.       ..|++++....++..      ..
T Consensus        21 ~Y~~~k~LG~G~fg~Vy~a~-~~~~~~~vAiK~i~~~~~~~~~Ei~il~~-------l~h~niv~~~~~~~~~~~~~~~~   92 (350)
T d1q5ka_          21 SYTDTKVIGNGSFGVVYQAK-LCDSGELVAIKKVLQDKRFKNRELQIMRK-------LDHCNIVRLRYFFYSSGEKKDEV   92 (350)
T ss_dssp             EEEEEEEEEEETTEEEEEEE-ETTTCCEEEEEEEECCSSSCCHHHHHHHH-------CCCTTBCCEEEEEEEC--CCSCC
T ss_pred             CcEeeeEEeeCcCeEEEEEE-ECCCCCEEEEEEECccchHHHHHHHHHHh-------cCCCCCCcEEEEEEecCccCCce
Confidence            79999999999999999999 577899999999875432   24433332       356777777666532      34


Q ss_pred             eeEEEEEecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeeccCCCC
Q 018699          120 YSILVCDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSG  199 (351)
Q Consensus       120 ~~~lv~e~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~~~~  199 (351)
                      ++|+||||+++ ++...+......+..+++..++.++.||+.||+|||++||+||||||+||+++               
T Consensus        93 ~~~lv~Ey~~~-~~~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~yLH~~~IiHrDiKp~NILl~---------------  156 (350)
T d1q5ka_          93 YLNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLD---------------  156 (350)
T ss_dssp             EEEEEEECCSE-EHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEEC---------------
T ss_pred             EEEEEEeccCC-ccHHHHHhhhhccCCCCHHHHHHHHHHHHHHHHHHHhcCCcccCCCcceEEEe---------------
Confidence            67999999965 55555544433367899999999999999999999999999999999999998               


Q ss_pred             Cccc-CCeEEeecCCccccccCCCCccccccccCCCcccceeccC-CCCCccchHhHHHHHHHHHHhCccccccccCCC-
Q 018699          200 PWQD-QGLCLVDWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQEK-KPWKFQVDTYGLCAIVHMMLHNSYMEIEKKASP-  276 (351)
Q Consensus       200 ~~~~-~~~~l~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~~DiwslG~il~~l~~g~~p~~~~~~~~-  276 (351)
                        .+ ..+||+|||++....   ......+..|++.|+|||.+.+ ..++.++||||+||++|+|++|.+||....... 
T Consensus       157 --~~~~~~kl~DFG~a~~~~---~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DIwSlG~il~el~~g~~pf~~~~~~~~  231 (350)
T d1q5ka_         157 --PDTAVLKLCDFGSAKQLV---RGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQ  231 (350)
T ss_dssp             --TTTCCEEECCCTTCEECC---TTSCCCSCCSCTTSCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHTSCSSCCSSHHHH
T ss_pred             --cCCCceeEecccchhhcc---CCcccccccccccccChHHhhcccCCCcceeecccceEEEehhhCCCCCCCCCHHHH
Confidence              44 368999999986543   2334455689999999998865 568999999999999999999999986432110 


Q ss_pred             ------------------------CCceeeecCc----chhhhhHHHHHHHHHHHHhcCCCCCChHHHHHHHHHHHHH
Q 018699          277 ------------------------DGGLVYLPKL----SFKRYWKVELWKSLFTNLLNMSSGNDKEVLQNLQKSFQDY  326 (351)
Q Consensus       277 ------------------------~~~~~~~~~~----~~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~~~~~~~  326 (351)
                                              ...+......    ......+ +.+.+||.+||.+||++|||+.|+|+|||.+-
T Consensus       232 l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s-~~~~dLl~~mL~~dP~~R~ta~e~L~Hp~f~~  308 (350)
T d1q5ka_         232 LVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTP-PEAIALCSRLLEYTPTARLTPLEACAHSFFDE  308 (350)
T ss_dssp             HHHHHHHHCCCCHHHHHHHCC---CCCCCCCCCCCGGGTSCTTSC-HHHHHHHHHHSCSSGGGSCCHHHHHTSGGGGG
T ss_pred             HHHHHHHhCCChHHhhhhhccchhhccccccccCchhhhcccCCC-HHHHHHHHHHccCChhHCcCHHHHhcCHhhcc
Confidence                                    0000000000    0111223 78999999999999999999999999987543

>d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Activated CDC42 kinase 1, ACK1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.3e-47  Score=335.76  Aligned_cols=256  Identities=15%  Similarity=0.074  Sum_probs=187.5

Q ss_pred             EEEEcCeeEEEEEEeeccCceEEEEEEecCCCC--ceEEEEecCCCCChHHHH---HHHHHhhhccccccccccceeeec
Q 018699           42 TIEIGGKKYQIKGCAGQGGFAKVFKAYVNGDPE--DVVALKIQKPAFPWEFYM---YRQLDQRISGRERSSFGFAHRIHL  116 (351)
Q Consensus        42 ~~~i~~~~Y~i~~~lg~G~~g~V~~a~~~~~~~--~~vaiK~~~~~~~~e~~~---~~~~~~~~~~~~~~~~~~~~~~~~  116 (351)
                      +..|+.++|++.+.||+|+||+||+|+++..++  ..||||++.+....+...   +......+....|++++.+.+++.
T Consensus         2 t~~i~~~d~~~~~~iG~G~fg~Vy~~~~~~~~~~~~~vAiK~l~~~~~~~~~~~~~~~~Ei~~l~~l~H~nIv~~~g~~~   81 (273)
T d1u46a_           2 TCLIGEKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVL   81 (273)
T ss_dssp             CEECCGGGEEEEEECC----CCCEEEEEECTTSCEEEEEEEC--------CHHHHHHHHHHHHHHHCCCTTBCCEEEEEC
T ss_pred             ceEEchHHeEEEEEEecCCCeEEEEEEEECCCCcEEEEEEEEEChhhcCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEe
Confidence            345677889999999999999999998654443  478999987654322222   222223455667899999988886


Q ss_pred             ccCeeEEEEEecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeeccC
Q 018699          117 YSDYSILVCDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHD  196 (351)
Q Consensus       117 ~~~~~~lv~e~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~  196 (351)
                      . +..++||||++++++.+.+...   ...+++..++.++.||+.||.|||++||+||||||+||+++            
T Consensus        82 ~-~~~~lv~e~~~~~~l~~~~~~~---~~~l~~~~~~~~~~qi~~gl~ylH~~~iiHrDikp~NIll~------------  145 (273)
T d1u46a_          82 T-PPMKMVTELAPLGSLLDRLRKH---QGHFLLGTLSRYAVQVAEGMGYLESKRFIHRDLAARNLLLA------------  145 (273)
T ss_dssp             S-SSCEEEEECCTTCBHHHHHHHH---GGGSCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEEE------------
T ss_pred             e-cchheeeeeecCcchhhhhhcc---cCCCCHHHHHHHHHHHHHHHHHhhhCCEeeeeecHHHhccc------------
Confidence            4 4678999999999999988765   46799999999999999999999999999999999999999            


Q ss_pred             CCCCcccCCeEEeecCCccccccCCCCccc-cccccCCCcccceeccCCCCCccchHhHHHHHHHHHHh-CccccccccC
Q 018699          197 RSGPWQDQGLCLVDWGRGIDLHLFPDNMEF-EGDCRTSGFRCIEMQEKKPWKFQVDTYGLCAIVHMMLH-NSYMEIEKKA  274 (351)
Q Consensus       197 ~~~~~~~~~~~l~Dfg~a~~~~~~~~~~~~-~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~-g~~p~~~~~~  274 (351)
                           .++.+||+|||++............ ....|+..|+|||++.+..++.++|||||||++|||++ |..||...+.
T Consensus       146 -----~~~~vkl~DfGl~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Di~S~Gvil~emlt~G~~Pf~~~~~  220 (273)
T d1u46a_         146 -----TRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNG  220 (273)
T ss_dssp             -----ETTEEEECCCTTCEECCC-CCEEEC-----CCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCTTTTCCH
T ss_pred             -----cccceeeccchhhhhcccCCCcceecCccccCcccCCHHHHhCCCCCcchhhhhhHHHHHHHHhCCCCCCCCcCH
Confidence                 6777999999999765433222222 23356788999999999999999999999999999998 8999965433


Q ss_pred             CCCCcee--eecCcchhhhhHHHHHHHHHHHHhcCCCCCChHHHHHH
Q 018699          275 SPDGGLV--YLPKLSFKRYWKVELWKSLFTNLLNMSSGNDKEVLQNL  319 (351)
Q Consensus       275 ~~~~~~~--~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l  319 (351)
                      .......  .....+.+..++ +.+.+||.+||++||++|||+.+++
T Consensus       221 ~~~~~~i~~~~~~~~~~~~~~-~~l~~li~~cl~~dp~~RPt~~ei~  266 (273)
T d1u46a_         221 SQILHKIDKEGERLPRPEDCP-QDIYNVMVQCWAHKPEDRPTFVALR  266 (273)
T ss_dssp             HHHHHHHHTSCCCCCCCTTCC-HHHHHHHHHHTCSSGGGSCCHHHHH
T ss_pred             HHHHHHHHhCCCCCCCccccc-HHHHHHHHHHcCCChhHCcCHHHHH
Confidence            2110000  111223344455 7899999999999999999999975

>d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 9, CDK9
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.1e-46  Score=337.88  Aligned_cols=253  Identities=21%  Similarity=0.160  Sum_probs=184.0

Q ss_pred             eeEEEEEEeeccCceEEEEEEecCCCCceEEEEecCCCCChH---HHHHHHHHhhhccccccccccceeeecc-------
Q 018699           48 KKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFPWE---FYMYRQLDQRISGRERSSFGFAHRIHLY-------  117 (351)
Q Consensus        48 ~~Y~i~~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~~~e---~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------  117 (351)
                      ++|+++++||+|+||+||+|+ +..+|+.||||++..+...+   ....+++ ..+....|+++.....+...       
T Consensus        10 ~rY~i~~~LG~G~fg~Vy~a~-~~~~~~~vAvK~i~~~~~~~~~~~~~~~E~-~il~~l~h~nii~~~~~~~~~~~~~~~   87 (318)
T d3blha1          10 SKYEKLAKIGQGTFGEVFKAR-HRKTGQKVALKKVLMENEKEGFPITALREI-KILQLLKHENVVNLIEICRTKASPYNR   87 (318)
T ss_dssp             GGEEEEEEEEECSSSEEEEEE-ETTTCCEEEEEEC----CTTSSCHHHHHHH-HHHHHCCCTTBCCEEEEEEC-------
T ss_pred             CCEEEEEEEecCcCeEEEEEE-ECCCCCEEEEEEEehhhcchHHHHHHHHHH-HHHHHhcCCCccceEeeeecccccccc
Confidence            689999999999999999999 56789999999986542221   1122222 22334456677766655432       


Q ss_pred             -cCeeEEEEEecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeeccC
Q 018699          118 -SDYSILVCDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHD  196 (351)
Q Consensus       118 -~~~~~lv~e~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~  196 (351)
                       .+..|+||||+.++.+......    ...+++..++.++.|++.||.|||++||+||||||+||+++            
T Consensus        88 ~~~~~~iv~e~~~~~~~~~~~~~----~~~~~~~~~~~i~~qil~~l~~lH~~~ivHrDlKp~NILl~------------  151 (318)
T d3blha1          88 CKGSIYLVFDFCEHDLAGLLSNV----LVKFTLSEIKRVMQMLLNGLYYIHRNKILHRDMKAANVLIT------------  151 (318)
T ss_dssp             ---CEEEEEECCCEEHHHHHTCT----TCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEC------------
T ss_pred             cCceEEEEEeccCCCccchhhhc----ccccccHHHHHHHHHHHHHHHHhccCCEEecCcCchheeec------------
Confidence             4568999999976655544333    46789999999999999999999999999999999999999            


Q ss_pred             CCCCcccCCeEEeecCCccccccCC--CCccccccccCCCcccceeccCC-CCCccchHhHHHHHHHHHHhCcccccccc
Q 018699          197 RSGPWQDQGLCLVDWGRGIDLHLFP--DNMEFEGDCRTSGFRCIEMQEKK-PWKFQVDTYGLCAIVHMMLHNSYMEIEKK  273 (351)
Q Consensus       197 ~~~~~~~~~~~l~Dfg~a~~~~~~~--~~~~~~~~~g~~~y~aPE~~~~~-~~~~~~DiwslG~il~~l~~g~~p~~~~~  273 (351)
                           .++.++|+|||++.......  ........+||+.|+|||++.+. .++.++||||+||++|+|++|..||....
T Consensus       152 -----~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~gT~~Y~aPE~~~~~~~~~~k~DiwSlGvil~el~~g~~pf~~~~  226 (318)
T d3blha1         152 -----RDGVLKLADFGLARAFSLAKNSQPNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNT  226 (318)
T ss_dssp             -----TTSCEEECCCTTCEECCC-----CCCCCSCCSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSCCCSS
T ss_pred             -----CCCcEEeeecceeeecccccccccccccceecCHHHhhHHHHcCCCCCCcHHHcccCCceeeeHhhCCCCCCCCC
Confidence                 77889999999986543221  12233446799999999998764 68899999999999999999999986422


Q ss_pred             CCCC---------------------------CceeeecCcchhhhh----HHHHHHHHHHHHhcCCCCCChHHHHHHHHH
Q 018699          274 ASPD---------------------------GGLVYLPKLSFKRYW----KVELWKSLFTNLLNMSSGNDKEVLQNLQKS  322 (351)
Q Consensus       274 ~~~~---------------------------~~~~~~~~~~~~~~~----~~~~~~~li~~~L~~dP~~R~s~~e~l~~~  322 (351)
                      ....                           ...........+..+    .++.+.+||.+||++||++|||+.|+|.||
T Consensus       227 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dLl~~mL~~dP~~R~sa~elL~Hp  306 (318)
T d3blha1         227 EQHQLALISQLCGSITPEVWPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALNHD  306 (318)
T ss_dssp             HHHHHHHHHHHHCCCCTTTSTTCCCC-------CCSSCCBCHHHHHHHHHCCHHHHHHHHHHSCSSTTTSCCHHHHHHSG
T ss_pred             HHHHHHHHHHhcCCCChhhccccchhhhhhhhcccccccccchhhhccccCCHHHHHHHHHHCcCChhHCcCHHHHHcCh
Confidence            1100                           000001111111111    126788999999999999999999999998


Q ss_pred             H
Q 018699          323 F  323 (351)
Q Consensus       323 ~  323 (351)
                      |
T Consensus       307 f  307 (318)
T d3blha1         307 F  307 (318)
T ss_dssp             G
T ss_pred             h
Confidence            6

>d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Ribosomal protein S6 kinase alpha 5, Msk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.1e-46  Score=337.30  Aligned_cols=249  Identities=19%  Similarity=0.217  Sum_probs=199.7

Q ss_pred             CeeEEEEEEeeccCceEEEEEEe--cCCCCceEEEEecCCC-----------CChHHHHHHHHHhhhcccccccccccee
Q 018699           47 GKKYQIKGCAGQGGFAKVFKAYV--NGDPEDVVALKIQKPA-----------FPWEFYMYRQLDQRISGRERSSFGFAHR  113 (351)
Q Consensus        47 ~~~Y~i~~~lg~G~~g~V~~a~~--~~~~~~~vaiK~~~~~-----------~~~e~~~~~~~~~~~~~~~~~~~~~~~~  113 (351)
                      -++|++.+.||+|+||+||+|++  +..+|+.||||++.+.           ...|...++.+.+      +++++....
T Consensus        23 l~~y~~~~~IG~G~fg~Vy~~~~~~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~~E~~il~~l~h------~pnIv~~~~   96 (322)
T d1vzoa_          23 IENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQ------SPFLVTLHY   96 (322)
T ss_dssp             GGGEEEEEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHT------CTTBCCEEE
T ss_pred             hhceEEEEEEecCCCeEEEEEEECccCCCCcEEEEEEEehHHhccchHHHHHHHHHHHHHHhccC------CCeEEEeee
Confidence            37899999999999999999985  2456899999987532           3345655555543      357778888


Q ss_pred             eecccCeeEEEEEecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceee
Q 018699          114 IHLYSDYSILVCDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVL  193 (351)
Q Consensus       114 ~~~~~~~~~lv~e~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~  193 (351)
                      +.......+++|||+.+++|.+++...    ..+++..++.++.||+.|+.|||++||+||||||+||+++         
T Consensus        97 ~~~~~~~~~~v~e~~~~~~L~~~i~~~----~~~~e~~~~~~~~Qi~~al~~lH~~~ivHrDiKp~Nill~---------  163 (322)
T d1vzoa_          97 AFQTETKLHLILDYINGGELFTHLSQR----ERFTEHEVQIYVGEIVLALEHLHKLGIIYRDIKLENILLD---------  163 (322)
T ss_dssp             EEEETTEEEEEECCCCSCBHHHHHHHH----SCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEC---------
T ss_pred             eeccCCceeeeeecccccHHHHHHHhc----ccccHHHHHHHHHHHHHHHHHhhcCCEEeccCCccceeec---------
Confidence            888889999999999999999999884    6788999999999999999999999999999999999999         


Q ss_pred             ccCCCCCcccCCeEEeecCCccccccCCCCccccccccCCCcccceeccCC--CCCccchHhHHHHHHHHHHhCcccccc
Q 018699          194 DHDRSGPWQDQGLCLVDWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQEKK--PWKFQVDTYGLCAIVHMMLHNSYMEIE  271 (351)
Q Consensus       194 ~~~~~~~~~~~~~~l~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~--~~~~~~DiwslG~il~~l~~g~~p~~~  271 (351)
                              .++.++|+|||++...... .........|++.|+|||.+.+.  .++.++|||||||++|+|++|..||..
T Consensus       164 --------~~~~vkL~DFG~a~~~~~~-~~~~~~~~~g~~~~~~pe~~~~~~~~~~~ksDIWSlG~iLyelltG~~PF~~  234 (322)
T d1vzoa_         164 --------SNGHVVLTDFGLSKEFVAD-ETERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTV  234 (322)
T ss_dssp             --------TTSCEEESCSSEEEECCGG-GGGGGCGGGSCCTTCCHHHHTTCC---CTHHHHHHHHHHHHHHHHSSCTTSC
T ss_pred             --------CCCCEEEeeccchhhhccc-ccccccccccccccchhHHhhcCCcCCCchhhhHHHHHHHHHHHhCCCCCCC
Confidence                    7788999999998654322 12234456789999999999664  467899999999999999999999977


Q ss_pred             ccCCCCCce----eeecCcchhhhhHHHHHHHHHHHHhcCCCCCCh-----HHHHHHHHHHH
Q 018699          272 KKASPDGGL----VYLPKLSFKRYWKVELWKSLFTNLLNMSSGNDK-----EVLQNLQKSFQ  324 (351)
Q Consensus       272 ~~~~~~~~~----~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~-----s~~e~l~~~~~  324 (351)
                      .........    ......+++...+ +.+.+||.+||++||++||     +++|+++|||.
T Consensus       235 ~~~~~~~~~i~~~~~~~~~~~~~~~s-~~~~~li~~~l~~dP~~R~s~~~~t~~eil~Hpff  295 (322)
T d1vzoa_         235 DGEKNSQAEISRRILKSEPPYPQEMS-ALAKDLIQRLLMKDPKKRLGCGPRDADEIKEHLFF  295 (322)
T ss_dssp             TTSCCCHHHHHHHHHHCCCCCCTTSC-HHHHHHHHHHTCSSGGGSTTSSTTTHHHHHTSGGG
T ss_pred             CCHHHHHHHHHHhcccCCCCCcccCC-HHHHHHHHHHcccCHHHcCCCCcccHHHHHcCHhh
Confidence            654422111    1123344445555 8999999999999999999     48999999874

>d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase CK2, alpha subunit
species: Rattus norvegicus [TaxId: 10116]

Probab=100.00  E-value=2.6e-46  Score=336.80  Aligned_cols=248  Identities=19%  Similarity=0.268  Sum_probs=189.0

Q ss_pred             CeeEEEEEEeeccCceEEEEEEecCCCCceEEEEecCCCCChHHHHHHHHHhhhccccccccccceeeec--ccCeeEEE
Q 018699           47 GKKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFPWEFYMYRQLDQRISGRERSSFGFAHRIHL--YSDYSILV  124 (351)
Q Consensus        47 ~~~Y~i~~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~lv  124 (351)
                      .++|+++++||+|+||+||+|+ +..+|+.||||++.+.....  ..+++.-......|++++....++.  ....+++|
T Consensus        34 ~d~y~i~~~LG~G~fg~V~~a~-~~~~~~~vAiK~i~~~~~~~--~~~Ei~il~~l~~hpnIv~~~~~~~~~~~~~~~~v  110 (328)
T d3bqca1          34 QDDYQLVRKLGRGKYSEVFEAI-NITNNEKVVVKILKPVKKKK--IKREIKILENLRGGPNIITLADIVKDPVSRTPALV  110 (328)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEE-ETTTTEEEEEEEECSSCHHH--HHHHHHHHHHHTTSTTBCCEEEEEECTTTCSEEEE
T ss_pred             CcCeEEEEEEecCcCeEEEEEE-ECCCCCEEEEEEECHHHHHH--HHHHHHHHHhccCCCCCcEEEEEEEecCCCceeEE
Confidence            4689999999999999999999 57789999999987654322  2222221111234778888877764  34678999


Q ss_pred             EEecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeeccCCCCCcccC
Q 018699          125 CDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSGPWQDQ  204 (351)
Q Consensus       125 ~e~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~~~~~~~~~  204 (351)
                      |||+.+++|....       +.+++..++.++.||+.||.|||++||+||||||+||+++.                .++
T Consensus       111 ~e~~~~~~L~~~~-------~~l~e~~i~~i~~qil~aL~~LH~~gIvHrDiKp~NILi~~----------------~~~  167 (328)
T d3bqca1         111 FEHVNNTDFKQLY-------QTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDH----------------EHR  167 (328)
T ss_dssp             EECCCSCBGGGTT-------TSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEET----------------TTT
T ss_pred             EeecCCCcHHHHh-------cCCCHHHHHHHHHHHHHHHHHHhhcccccccccccceEEcC----------------CCC
Confidence            9999999987652       46899999999999999999999999999999999999983                223


Q ss_pred             CeEEeecCCccccccCCCCccccccccCCCcccceeccCC-CCCccchHhHHHHHHHHHHhCccccccccCCC-------
Q 018699          205 GLCLVDWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQEKK-PWKFQVDTYGLCAIVHMMLHNSYMEIEKKASP-------  276 (351)
Q Consensus       205 ~~~l~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~-~~~~~~DiwslG~il~~l~~g~~p~~~~~~~~-------  276 (351)
                      .++|+|||+|....   .........+|+.|+|||.+.+. .++.++||||+||++|+|++|..||.......       
T Consensus       168 ~vkl~DFG~a~~~~---~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~~l~e~~~g~~pf~~~~~~~~~~~~i~  244 (328)
T d3bqca1         168 KLRLIDWGLAEFYH---PGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIA  244 (328)
T ss_dssp             EEEECCGGGCEECC---TTCCCCSCCSCGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHTCSSSSCCSSHHHHHHHHH
T ss_pred             eeeecccccceecc---CCCcccccccCccccCcccccCCCCCCcccchhhhhhhhHHhccCCCCCCCCchhHHHHHHHH
Confidence            48999999986533   23334566789999999998764 57899999999999999999999985432110       


Q ss_pred             -----------------C--------------CceeeecCcchhhhhHHHHHHHHHHHHhcCCCCCChHHHHHHHHHHH
Q 018699          277 -----------------D--------------GGLVYLPKLSFKRYWKVELWKSLFTNLLNMSSGNDKEVLQNLQKSFQ  324 (351)
Q Consensus       277 -----------------~--------------~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~~~~~  324 (351)
                                       .              ...............+ +++.+||++||.+||.+|||+.|+|+|||.
T Consensus       245 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s-~~~~dli~~mL~~dP~~R~ta~e~L~Hp~F  322 (328)
T d3bqca1         245 KVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVS-PEALDFLDKLLRYDHQSRLTAREAMEHPYF  322 (328)
T ss_dssp             HHHCHHHHHHHHHHTTCCCCGGGGGTCCCCCCCCGGGGCCTTTGGGCC-HHHHHHHHHHSCSSGGGSCCHHHHHTSGGG
T ss_pred             HHHCCchhhhhhhhcccccCcccchhcccccccchhhcccccccccCC-HHHHHHHHHHccCChhHCcCHHHHhcCccc
Confidence                             0              0000001111222234 789999999999999999999999999863

>d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase Erk2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.4e-46  Score=338.95  Aligned_cols=253  Identities=19%  Similarity=0.188  Sum_probs=186.0

Q ss_pred             CeeEEEEEEeeccCceEEEEEEecCCCCceEEEEecCCCCChH-HHHHHHHHhhhccccccccccceeeecccC----ee
Q 018699           47 GKKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFPWE-FYMYRQLDQRISGRERSSFGFAHRIHLYSD----YS  121 (351)
Q Consensus        47 ~~~Y~i~~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~~~e-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~  121 (351)
                      +.+|++++.||+|+||+||+|+ +..+|+.||||++.+..... ..........+....|++++....+.....    ..
T Consensus         7 ~~rY~~~~~LG~G~fg~Vy~~~-~~~~~~~vAvK~i~~~~~~~~~~~~~~Ei~il~~l~hp~iv~~~~~~~~~~~~~~~~   85 (345)
T d1pmea_           7 GPRYTNLSYIGEGAYGMVCSAY-DNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKD   85 (345)
T ss_dssp             CTTEEEEEECC---CCCEEEEE-ETTTCSEEEEEEECCTTCHHHHHHHHHHHHHHHHCCCTTBCCCCEEECCSSTTTCCC
T ss_pred             CCCeEEEEEEeeccCeEEEEEE-ECCCCcEEEEEEEehhcChHHHHHHHHHHHHHHHcCCCCCCcEEEEEeeccccccce
Confidence            4679999999999999999999 57889999999987654321 222222223344456777777776654322    23


Q ss_pred             EEEEEecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeeccCCCCCc
Q 018699          122 ILVCDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSGPW  201 (351)
Q Consensus       122 ~lv~e~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~~~~~~  201 (351)
                      +++++++.+++|.+++..     ..+++..++.++.||+.||+|||++||+||||||+||+++                 
T Consensus        86 ~~l~~~~~~g~L~~~l~~-----~~l~~~~i~~i~~qil~al~yLH~~~iiHRDIKp~NILl~-----------------  143 (345)
T d1pmea_          86 VYLVTHLMGADLYKLLKT-----QHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLN-----------------  143 (345)
T ss_dssp             EEEEEECCCEEHHHHHHH-----CCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEC-----------------
T ss_pred             EEEEEeecCCchhhhhhc-----CCCCHHHHHHHHHHHHHHHHHHHHCCCcCCCCCcceEEEC-----------------
Confidence            444555669999999976     4699999999999999999999999999999999999999                 


Q ss_pred             ccCCeEEeecCCccccccCCC-CccccccccCCCcccceec-cCCCCCccchHhHHHHHHHHHHhCccccccccCCCCC-
Q 018699          202 QDQGLCLVDWGRGIDLHLFPD-NMEFEGDCRTSGFRCIEMQ-EKKPWKFQVDTYGLCAIVHMMLHNSYMEIEKKASPDG-  278 (351)
Q Consensus       202 ~~~~~~l~Dfg~a~~~~~~~~-~~~~~~~~g~~~y~aPE~~-~~~~~~~~~DiwslG~il~~l~~g~~p~~~~~~~~~~-  278 (351)
                      .++.+||+|||++........ .......+||+.|+|||++ .+..++.++||||+||++|+|++|..||......... 
T Consensus       144 ~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~eml~g~~pf~~~~~~~~~~  223 (345)
T d1pmea_         144 TTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLN  223 (345)
T ss_dssp             TTCCEEECCCTTCEECCGGGCBCCTTCCCCSCGGGCCGGGTTTBCSCSTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHH
T ss_pred             CCCCEEEcccCceeeccCCCccceeeccccccceechHHHhhcCCCCCchhhhhccCceehHHhhCCCCCCCCCHHHHHH
Confidence            778899999999865432221 2223556789999999998 4456789999999999999999999999654321000 


Q ss_pred             ---------------------------ceeeecCcch---hhhhHHHHHHHHHHHHhcCCCCCChHHHHHHHHHH
Q 018699          279 ---------------------------GLVYLPKLSF---KRYWKVELWKSLFTNLLNMSSGNDKEVLQNLQKSF  323 (351)
Q Consensus       279 ---------------------------~~~~~~~~~~---~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~~~~  323 (351)
                                                 ........+.   ...++ ..+.+||.+||++||.+|||+.|+|+|||
T Consensus       224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s-~~~~~li~~~L~~dP~~R~ta~e~L~hpf  297 (345)
T d1pmea_         224 HILGILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNAD-SKALDLLDKMLTFNPHKRIEVEQALAHPY  297 (345)
T ss_dssp             HHHHHHCSCCHHHHHTCCCHHHHHHHHTSCCCCCCCHHHHCTTSC-HHHHHHHHHHSCSSTTTSCCHHHHHTSGG
T ss_pred             HHhhhccCCChhhhhhhhhhhhhcccccCCccCCCCHHHhCCCCC-HHHHHHHHHHccCChhHCcCHHHHhcCHh
Confidence                                       0000011111   11223 67899999999999999999999999987

>d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Musk tyrosine kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=100.00  E-value=1.1e-46  Score=334.95  Aligned_cols=259  Identities=12%  Similarity=0.070  Sum_probs=198.1

Q ss_pred             EEcCeeEEEEEEeeccCceEEEEEEecC----CCCceEEEEecCCCCChHH-HHHHHHHhhhccccccccccceeeeccc
Q 018699           44 EIGGKKYQIKGCAGQGGFAKVFKAYVNG----DPEDVVALKIQKPAFPWEF-YMYRQLDQRISGRERSSFGFAHRIHLYS  118 (351)
Q Consensus        44 ~i~~~~Y~i~~~lg~G~~g~V~~a~~~~----~~~~~vaiK~~~~~~~~e~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~  118 (351)
                      ++..++|++.+.||+|+||+||+|++..    .+++.||||++......+. ..+......+....|++++.....+...
T Consensus         9 e~p~~~~~~~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~   88 (301)
T d1lufa_           9 EYPRNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVKLLGVCAVG   88 (301)
T ss_dssp             BCCGGGCEEEEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSS
T ss_pred             cCCHHHcEEeEEEeeCCCeEEEEEEECCCccCCCCeEEEEEEEChhcChHHHHHHHHHHHHHHhcCCCCcccceeeeccC
Confidence            4456789999999999999999999632    4568999999876544322 2222223345566788999999988888


Q ss_pred             CeeEEEEEecCCCCHHHHHHHHHh--------------------hCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCC
Q 018699          119 DYSILVCDYLSQGTLQDAINSYVV--------------------IGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKP  178 (351)
Q Consensus       119 ~~~~lv~e~~~~~sL~~~l~~~~~--------------------~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p  178 (351)
                      +..++||||+++|+|.+++.....                    ....+++..+..++.|++.|++|||+++|+||||||
T Consensus        89 ~~~~~v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~ylH~~~ivHrDlKp  168 (301)
T d1lufa_          89 KPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSERKFVHRDLAT  168 (301)
T ss_dssp             SSCEEEEECCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSG
T ss_pred             CceEEEEEecCCCcHHHHHHhcCccccccccccccchhhhccccCCCCCCHHHHHHHHHHHHHHhhhcccCCeEeeEEcc
Confidence            999999999999999999875310                    012478889999999999999999999999999999


Q ss_pred             CcEEEeecCCcceeeccCCCCCcccCCeEEeecCCccccccCCCCccccccccCCCcccceeccCCCCCccchHhHHHHH
Q 018699          179 DNLLIRYARDELTVLDHDRSGPWQDQGLCLVDWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQEKKPWKFQVDTYGLCAI  258 (351)
Q Consensus       179 ~Nill~~~~~~~~~~~~~~~~~~~~~~~~l~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~i  258 (351)
                      +||+++                 .++.+||+|||+|................+++.|+|||++.+..++.++|||||||+
T Consensus       169 ~NILld-----------------~~~~~Kl~DFGls~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~t~ksDVwS~Gvv  231 (301)
T d1lufa_         169 RNCLVG-----------------ENMVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVV  231 (301)
T ss_dssp             GGEEEC-----------------GGGCEEECCCSCHHHHTGGGCBC----CCBCGGGCCHHHHHHCCCCHHHHHHHHHHH
T ss_pred             cceEEC-----------------CCCcEEEccchhheeccCCccccccCCCCcCcCcCCHHHHccCCCChhhhhccchhh
Confidence            999999                 778899999999875433222233345678899999999999999999999999999


Q ss_pred             HHHHHhCc-cccccccCCCCCce-eeecCcchhhhhHHHHHHHHHHHHhcCCCCCChHHHHHHH
Q 018699          259 VHMMLHNS-YMEIEKKASPDGGL-VYLPKLSFKRYWKVELWKSLFTNLLNMSSGNDKEVLQNLQ  320 (351)
Q Consensus       259 l~~l~~g~-~p~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~  320 (351)
                      +|||++|. +||........... ......+.|...+ +.+.+||.+||+.||++|||+.|+++
T Consensus       232 l~ell~~~~~p~~~~~~~e~~~~v~~~~~~~~p~~~~-~~~~~li~~cl~~~P~~RPt~~ev~~  294 (301)
T d1lufa_         232 LWEIFSYGLQPYYGMAHEEVIYYVRDGNILACPENCP-LELYNLMRLCWSKLPADRPSFCSIHR  294 (301)
T ss_dssp             HHHHHTTTCCTTTTSCHHHHHHHHHTTCCCCCCTTCC-HHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             HHHHHccCCCCCCCCCHHHHHHHHHcCCCCCCCccch-HHHHHHHHHHcCCChhHCcCHHHHHH
Confidence            99999996 56654433211010 1112223344445 78999999999999999999999854

>d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Carboxyl-terminal src kinase (csk)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=9.4e-47  Score=327.90  Aligned_cols=249  Identities=13%  Similarity=0.113  Sum_probs=189.7

Q ss_pred             EEEcCeeEEEEEEeeccCceEEEEEEecCCCCceEEEEecCCCCChHHHHHHHHHhhhccccccccccceeeecc-cCee
Q 018699           43 IEIGGKKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFPWEFYMYRQLDQRISGRERSSFGFAHRIHLY-SDYS  121 (351)
Q Consensus        43 ~~i~~~~Y~i~~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~  121 (351)
                      ++|.-++|++.+.||+|+||+||+|.+   .|..||||+++.+...+ ...++ ...+....|++++.+.+++.. .+.+
T Consensus         2 w~i~~~~~~~~~~lG~G~fg~Vy~~~~---~~~~vAvK~i~~~~~~~-~~~~E-~~~l~~l~HpnIv~~~g~~~~~~~~~   76 (262)
T d1byga_           2 WALNMKELKLLQTIGKGEFGDVMLGDY---RGNKVAVKCIKNDATAQ-AFLAE-ASVMTQLRHSNLVQLLGVIVEEKGGL   76 (262)
T ss_dssp             CBCCGGGEEEEEEEEECSSCEEEEEEE---TTEEEEEEECCCCC--H-HHHHT-HHHHTTCCCTTBCCEEEEECCC--CC
T ss_pred             CccCHHHeEEeEEEecCCCeEEEEEEE---CCeEEEEEEECcHHHHH-HHHHH-HHHHHhCCCCCEeeEEEEEEecCCcE
Confidence            356667899999999999999999995   36789999997654322 22222 234455678999999887744 4668


Q ss_pred             EEEEEecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeeccCCCCCc
Q 018699          122 ILVCDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSGPW  201 (351)
Q Consensus       122 ~lv~e~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~~~~~~  201 (351)
                      |+||||+++|+|.+++....  ...+++..++.++.||+.|+.|||+++|+||||+|+||+++                 
T Consensus        77 ~lv~ey~~~g~L~~~l~~~~--~~~l~~~~~~~i~~~i~~al~ylH~~~ivH~dlkp~Nil~~-----------------  137 (262)
T d1byga_          77 YIVTEYMAKGSLVDYLRSRG--RSVLGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAARNVLVS-----------------  137 (262)
T ss_dssp             EEEECCCTTEEHHHHHHHHH--HHHCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEC-----------------
T ss_pred             EEEEeccCCCCHHHHHHhcC--CCCCCHHHHHHHHHHHHhhccccccCceeccccchHhheec-----------------
Confidence            99999999999999997643  23589999999999999999999999999999999999999                 


Q ss_pred             ccCCeEEeecCCccccccCCCCccccccccCCCcccceeccCCCCCccchHhHHHHHHHHHHh-CccccccccCCCCCce
Q 018699          202 QDQGLCLVDWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQEKKPWKFQVDTYGLCAIVHMMLH-NSYMEIEKKASPDGGL  280 (351)
Q Consensus       202 ~~~~~~l~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~-g~~p~~~~~~~~~~~~  280 (351)
                      .++.++|+|||++....     .......++..|+|||.+.+..++.++|||||||++|||++ |++||...........
T Consensus       138 ~~~~~kl~dfg~s~~~~-----~~~~~~~~~~~y~aPE~l~~~~~t~~sDIwSfG~il~el~t~~~~p~~~~~~~~~~~~  212 (262)
T d1byga_         138 EDNVAKVSDFGLTKEAS-----STQDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPR  212 (262)
T ss_dssp             TTSCEEECCCCC-----------------CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCGGGHHHH
T ss_pred             CCCCEeecccccceecC-----CCCccccccccCCChHHHhCCCCChHHHHHhHHHHHHHHHHCCCCCCCCCCHHHHHHH
Confidence            78889999999986432     12233457889999999998999999999999999999998 6777765433211000


Q ss_pred             -eeecCcchhhhhHHHHHHHHHHHHhcCCCCCChHHHHHHHH
Q 018699          281 -VYLPKLSFKRYWKVELWKSLFTNLLNMSSGNDKEVLQNLQK  321 (351)
Q Consensus       281 -~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~~  321 (351)
                       .....++.+..++ +.+.+||.+||..||++|||+.+++++
T Consensus       213 i~~~~~~~~~~~~~-~~~~~li~~cl~~dP~~Rps~~~l~~~  253 (262)
T d1byga_         213 VEKGYKMDAPDGCP-PAVYEVMKNCWHLDAAMRPSFLQLREQ  253 (262)
T ss_dssp             HTTTCCCCCCTTCC-HHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             HHcCCCCCCCccCC-HHHHHHHHHHcccCHhHCcCHHHHHHH
Confidence             0112334445555 889999999999999999999998775

>d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-jun N-terminal kinase (jnk3s)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=8e-46  Score=336.82  Aligned_cols=250  Identities=20%  Similarity=0.252  Sum_probs=182.3

Q ss_pred             eeEEEEEEeeccCceEEEEEEecCCCCceEEEEecCCCCChHHHHHH--HHHhhhccccccccccceeeec------ccC
Q 018699           48 KKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFPWEFYMYR--QLDQRISGRERSSFGFAHRIHL------YSD  119 (351)
Q Consensus        48 ~~Y~i~~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~~~e~~~~~--~~~~~~~~~~~~~~~~~~~~~~------~~~  119 (351)
                      ++|+++++||+|+||+||+|+ +..+|+.||||++......+....+  .....+....|++++....++.      ..+
T Consensus        17 ~~Y~i~~~LG~G~fg~V~~~~-d~~t~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~~~~~f~~~~~~~~~~   95 (355)
T d2b1pa1          17 KRYQNLKPIGSGAQGIVCAAY-DAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQ   95 (355)
T ss_dssp             TTEEEEEECSCC--CEEEEEE-ETTTTEEEEEEEEESTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCCSTTTCC
T ss_pred             CCeEEEEEeecCcCeEEEEEE-ECCCCCEEEEEEEChhhcCHHHHHHHHHHHHHHHhcCCCCeeEEEEEEecccccccCc
Confidence            579999999999999999999 5788999999999876544332211  1122233456788888777764      246


Q ss_pred             eeEEEEEecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeeccCCCC
Q 018699          120 YSILVCDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSG  199 (351)
Q Consensus       120 ~~~lv~e~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~~~~  199 (351)
                      .+|+||||+.+ ++.+.+      ...+++..++.++.||+.|+.|||++||+||||||+||+++               
T Consensus        96 ~~~iv~Ey~~~-~l~~~~------~~~~~~~~i~~~~~qil~gl~~LH~~giiHrDlKP~Nil~~---------------  153 (355)
T d2b1pa1          96 DVYLVMELMDA-NLCQVI------QMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVK---------------  153 (355)
T ss_dssp             EEEEEEECCSE-EHHHHH------TSCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEC---------------
T ss_pred             eeEEEEeccch-HHHHhh------hcCCCHHHHHHHHHHHHHHHHHhhhcccccccCCccccccc---------------
Confidence            88999999955 554444      24689999999999999999999999999999999999999               


Q ss_pred             CcccCCeEEeecCCccccccCCCCccccccccCCCcccceeccCCCCCccchHhHHHHHHHHHHhCccccccccCCC---
Q 018699          200 PWQDQGLCLVDWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQEKKPWKFQVDTYGLCAIVHMMLHNSYMEIEKKASP---  276 (351)
Q Consensus       200 ~~~~~~~~l~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~p~~~~~~~~---  276 (351)
                        .++.++++|||++....   .........+|+.|+|||++.+..++.++||||+||++|+|++|++||...+...   
T Consensus       154 --~~~~~kl~df~~~~~~~---~~~~~~~~~~t~~y~aPE~l~~~~~~~~~DiwSlG~~l~ell~g~~pF~~~~~~~~~~  228 (355)
T d2b1pa1         154 --SDCTLKILDFGLARTAG---TSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWN  228 (355)
T ss_dssp             --TTCCEEECCCCC------------------CCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHH
T ss_pred             --cccceeeechhhhhccc---cccccccccccccccChhhhcCCCCCCCcccccccchHHHHhhCCCCCCCCCHHHHHH
Confidence              77889999999886433   2333455678999999999999999999999999999999999999985332110   


Q ss_pred             ------------------------------CCce---------eeecCcchhhhhHHHHHHHHHHHHhcCCCCCChHHHH
Q 018699          277 ------------------------------DGGL---------VYLPKLSFKRYWKVELWKSLFTNLLNMSSGNDKEVLQ  317 (351)
Q Consensus       277 ------------------------------~~~~---------~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~e  317 (351)
                                                    ....         ............+ +.+.+||++||.+||++|||+.|
T Consensus       229 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s-~~~~dll~~mL~~dP~~R~ta~e  307 (355)
T d2b1pa1         229 KVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKA-SQARDLLSKMLVIDPAKRISVDD  307 (355)
T ss_dssp             HHHHHHCCCCHHHHTTSCHHHHHHHHTSCCCCCCCHHHHSCGGGSCCSSHHHHHHH-HHHHHHHHHHSCSSTTTSCCHHH
T ss_pred             HHHHhccCCCHHHHHHhhhhHHHHhhcCccccccccccccccccccccccccccCC-HHHHHHHHHHCcCChhHCcCHHH
Confidence                                          0000         0001111122233 78999999999999999999999


Q ss_pred             HHHHHHHHH
Q 018699          318 NLQKSFQDY  326 (351)
Q Consensus       318 ~l~~~~~~~  326 (351)
                      +|+|||...
T Consensus       308 lL~Hpw~~~  316 (355)
T d2b1pa1         308 ALQHPYINV  316 (355)
T ss_dssp             HHTSTTTGG
T ss_pred             HhcCcccCC
Confidence            999998653

>d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK5
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=9.6e-46  Score=327.79  Aligned_cols=252  Identities=17%  Similarity=0.162  Sum_probs=195.9

Q ss_pred             eeEEEEEEeeccCceEEEEEEecCCCCceEEEEecCCCCChH--HHHHHHHHhhhccccccccccceeeecccCeeEEEE
Q 018699           48 KKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFPWE--FYMYRQLDQRISGRERSSFGFAHRIHLYSDYSILVC  125 (351)
Q Consensus        48 ~~Y~i~~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~~~e--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~  125 (351)
                      ++|+++++||+|+||+||+|+ +..+++.||||+++.+...+  ...............|++++.....+...+..++|+
T Consensus         2 ~ry~~i~~LG~G~fg~V~~~~-~~~~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~iv~   80 (292)
T d1unla_           2 QKYEKLEKIGEGTYGTVFKAK-NRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVF   80 (292)
T ss_dssp             CSEEEEEEEEECSSSEEEEEE-ETTTCCEEEEEEEESSCSSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred             CCCEeeeEEecCcCeEEEEEE-ECCCCcEEEEEEEehhhCChHHHHHHHHHHHHHHhcCcCCEEeeccccccccceeEEe
Confidence            589999999999999999999 57889999999986554322  222222223345567888888888888899999999


Q ss_pred             EecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeeccCCCCCcccCC
Q 018699          126 DYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSGPWQDQG  205 (351)
Q Consensus       126 e~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~~~~~~~~~~  205 (351)
                      +++.+++|..++..    .+.+++..++.++.|++.||+|||++||+||||||+||+++                 .++.
T Consensus        81 ~~~~~~~l~~~~~~----~~~~~~~~~~~~~~q~~~aL~~lH~~~IvHrDiKP~NIli~-----------------~~~~  139 (292)
T d1unla_          81 EFCDQDLKKYFDSC----NGDLDPEIVKSFLFQLLKGLGFCHSRNVLHRDLKPQNLLIN-----------------RNGE  139 (292)
T ss_dssp             ECCSEEHHHHHHHT----TTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEC-----------------TTCC
T ss_pred             eecccccccccccc----ccccchhHHHHHHHHHHHHHHHhhcCCEeeecccCcccccc-----------------cCCc
Confidence            99988888887766    57889999999999999999999999999999999999999                 6778


Q ss_pred             eEEeecCCccccccCCCCccccccccCCCcccceeccCCC-CCccchHhHHHHHHHHHHhCccccccccCCC--------
Q 018699          206 LCLVDWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQEKKP-WKFQVDTYGLCAIVHMMLHNSYMEIEKKASP--------  276 (351)
Q Consensus       206 ~~l~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~-~~~~~DiwslG~il~~l~~g~~p~~~~~~~~--------  276 (351)
                      +||+|||.+.....  .........+++.|+|||++.+.. ++.++|||||||++|+|++|..||.......        
T Consensus       140 ~kl~DFG~a~~~~~--~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~DiwSlG~il~ell~g~~p~~~~~~~~~~~~~~~~  217 (292)
T d1unla_         140 LKLANFGLARAFGI--PVRCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFR  217 (292)
T ss_dssp             EEECCCTTCEECCS--CCSCCCSCCSCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHTTTSCCSCCCSSHHHHHHHHHH
T ss_pred             eeeeecchhhcccC--CCccceeeccccchhhhhHhccCCCCCchhhccccchHHHHHhhCCCCCCCCCCHHHHHHHHHh
Confidence            99999999975432  222333445778899999987654 6899999999999999999999864221100        


Q ss_pred             ------------------CCce----eeecCcchhhhhHHHHHHHHHHHHhcCCCCCChHHHHHHHHHHH
Q 018699          277 ------------------DGGL----VYLPKLSFKRYWKVELWKSLFTNLLNMSSGNDKEVLQNLQKSFQ  324 (351)
Q Consensus       277 ------------------~~~~----~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~~~~~  324 (351)
                                        ....    ............+ +.+.+||++||++||.+|||+.|+|+|||.
T Consensus       218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s-~~~~dll~~mL~~dP~~R~sa~e~L~Hp~f  286 (292)
T d1unla_         218 LLGTPTEEQWPSMTKLPDYKPYPMYPATTSLVNVVPKLN-ATGRDLLQNLLKCNPVQRISAEEALQHPYF  286 (292)
T ss_dssp             HHCCCCTTTCTTGGGSTTCCCCCCCCTTCCCTTTSTTCC-HHHHHHHHHHSCSSGGGSCCHHHHTTSGGG
T ss_pred             hcCCCChhhhhhhhhcccccccccccccchhhhccccCC-HHHHHHHHHHccCChhHCcCHHHHhcChhh
Confidence                              0000    0011111222234 788999999999999999999999999864

>d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-KIT receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3.1e-46  Score=333.37  Aligned_cols=260  Identities=12%  Similarity=0.061  Sum_probs=201.0

Q ss_pred             EEEcCeeEEEEEEeeccCceEEEEEEe----cCCCCceEEEEecCCCCChH-H-HHHHHHHhhhccccccccccceeeec
Q 018699           43 IEIGGKKYQIKGCAGQGGFAKVFKAYV----NGDPEDVVALKIQKPAFPWE-F-YMYRQLDQRISGRERSSFGFAHRIHL  116 (351)
Q Consensus        43 ~~i~~~~Y~i~~~lg~G~~g~V~~a~~----~~~~~~~vaiK~~~~~~~~e-~-~~~~~~~~~~~~~~~~~~~~~~~~~~  116 (351)
                      +++..++|++.++||+|+||.||+|++    +..+++.||||++....... . ...+++........|++++....+..
T Consensus        18 ~~~~~~~~~l~~~iG~G~fg~Vy~a~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~E~~~~~~l~~HpnIv~~~g~~~   97 (311)
T d1t46a_          18 WEFPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACT   97 (311)
T ss_dssp             GBCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEC
T ss_pred             ccCCHHHeEEeeEEeecCCeEEEEEEEeccccCCCCeEEEEEEECcccCHHHHHHHHHHHHHHHhccCCCCEEEEEEEEe
Confidence            356678999999999999999999986    23567899999987654322 1 22222222222336899999999998


Q ss_pred             ccCeeEEEEEecCCCCHHHHHHHHHh--------------hCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEE
Q 018699          117 YSDYSILVCDYLSQGTLQDAINSYVV--------------IGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLL  182 (351)
Q Consensus       117 ~~~~~~lv~e~~~~~sL~~~l~~~~~--------------~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nil  182 (351)
                      .++..++||||+++|+|.+++.....              ....+++..+..++.||+.|++|||+++++||||||+||+
T Consensus        98 ~~~~~~lvmE~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~gl~~LH~~~ivHrDLKp~NIl  177 (311)
T d1t46a_          98 IGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNIL  177 (311)
T ss_dssp             SSSSCEEEEECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEE
T ss_pred             eCCEEEEEEEcCCCCCHHHHHHhccccccccccccccccccccCCCHHHHHHHHHHHHHHHHHHHhCCeeeccccccccc
Confidence            88999999999999999999976421              1235889999999999999999999999999999999999


Q ss_pred             EeecCCcceeeccCCCCCcccCCeEEeecCCccccccCCCCccccccccCCCcccceeccCCCCCccchHhHHHHHHHHH
Q 018699          183 IRYARDELTVLDHDRSGPWQDQGLCLVDWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQEKKPWKFQVDTYGLCAIVHMM  262 (351)
Q Consensus       183 l~~~~~~~~~~~~~~~~~~~~~~~~l~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~l  262 (351)
                      ++                 ..+.++++|||.+................||+.|+|||.+.+..++.++|||||||++|+|
T Consensus       178 ~~-----------------~~~~~ki~DfG~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DIwS~G~~l~el  240 (311)
T d1t46a_         178 LT-----------------HGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWEL  240 (311)
T ss_dssp             EE-----------------TTTEEEECCCGGGSCTTSCTTSEECSSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHH
T ss_pred             cc-----------------ccCcccccccchheeccCCCcceEeeecccChHHcCHHHhcCCCCCCcccccchHHHHHHH
Confidence            99                 7788999999999765433333333456789999999999999999999999999999999


Q ss_pred             HhC-ccccccccCCCCC--ceeeecCcchhhhhHHHHHHHHHHHHhcCCCCCChHHHHHHH
Q 018699          263 LHN-SYMEIEKKASPDG--GLVYLPKLSFKRYWKVELWKSLFTNLLNMSSGNDKEVLQNLQ  320 (351)
Q Consensus       263 ~~g-~~p~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~  320 (351)
                      +++ .+||.........  ..........+..++ +.+.+||.+||++||.+|||+.|+++
T Consensus       241 lt~g~p~~~~~~~~~~~~~~i~~~~~~~~~~~~~-~~l~~Li~~cl~~dP~~RPs~~~il~  300 (311)
T d1t46a_         241 FSLGSSPYPGMPVDSKFYKMIKEGFRMLSPEHAP-AEMYDIMKTCWDADPLKRPTFKQIVQ  300 (311)
T ss_dssp             HTTTCCSSTTCCSSHHHHHHHHHTCCCCCCTTSC-HHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             HhCCCCCCCCCCHHHHHHHHHhcCCCCCCccccc-HHHHHHHHHHcCCChhHCcCHHHHHH
Confidence            985 5555443332110  001122333444455 88999999999999999999999886

>d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]

Probab=100.00  E-value=2.1e-45  Score=325.29  Aligned_cols=262  Identities=17%  Similarity=0.146  Sum_probs=194.9

Q ss_pred             EcCeeEEEEEEeeccCceEEEEEEecCCCCceEEEEecCCCCChHHHHHHHHHhhhccccccccccceeeecccCeeEEE
Q 018699           45 IGGKKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFPWEFYMYRQLDQRISGRERSSFGFAHRIHLYSDYSILV  124 (351)
Q Consensus        45 i~~~~Y~i~~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv  124 (351)
                      +.|++|++.+.||+|+||+||+|+ +..+|+.||||++......+ ....++........+++++.+..+...+...++|
T Consensus         2 vig~~Y~i~~~iG~G~fG~Vy~a~-~~~~~~~vAvK~~~~~~~~~-~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~~v   79 (293)
T d1csna_           2 VVGVHYKVGRRIGEGSFGVIFEGT-NLLNNQQVAIKFEPRRSDAP-QLRDEYRTYKLLAGCTGIPNVYYFGQEGLHNVLV   79 (293)
T ss_dssp             EETTTEEEEEEEEECSSCEEEEEE-ETTTTEEEEEEEEECCTTSC-CHHHHHHHHHHTTTCTTCCCEEEEEEETTEEEEE
T ss_pred             CCCCceEEEEEEecCCCeEEEEEE-ECCCCCEEEEEEEccccCcH-HHHHHHHHHHHhcCCCCCCEEEEEeecCCccEEE
Confidence            347899999999999999999999 56789999999975432211 1112222211222346777777778888999999


Q ss_pred             EEecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeeccCCCCCcccC
Q 018699          125 CDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSGPWQDQ  204 (351)
Q Consensus       125 ~e~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~~~~~~~~~  204 (351)
                      |||+ +++|.+++...   +..++..++..++.|++.||.|||++||+||||||+||+++.....            ..+
T Consensus        80 me~~-~~~l~~~~~~~---~~~~~~~~~~~i~~q~~~~l~~lH~~giiHrDiKp~Nili~~~~~~------------~~~  143 (293)
T d1csna_          80 IDLL-GPSLEDLLDLC---GRKFSVKTVAMAAKQMLARVQSIHEKSLVYRDIKPDNFLIGRPNSK------------NAN  143 (293)
T ss_dssp             EECC-CCBHHHHHHHT---TTCCCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEECCSSST------------TTT
T ss_pred             EEec-CCCHHHHHHhh---ccchhhHHHHHHHHHHHHHHHHHHHCCceeccCCccceeecCcccc------------cCC
Confidence            9999 88999998764   5679999999999999999999999999999999999999854322            457


Q ss_pred             CeEEeecCCccccccCCCC-----ccccccccCCCcccceeccCCCCCccchHhHHHHHHHHHHhCccccccccCCCCCc
Q 018699          205 GLCLVDWGRGIDLHLFPDN-----MEFEGDCRTSGFRCIEMQEKKPWKFQVDTYGLCAIVHMMLHNSYMEIEKKASPDGG  279 (351)
Q Consensus       205 ~~~l~Dfg~a~~~~~~~~~-----~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~p~~~~~~~~~~~  279 (351)
                      .++|+|||+|.........     .......||+.|+|||++.+..++.++|||||||++|+|++|..||..........
T Consensus       144 ~vkl~DFG~a~~~~~~~~~~~~~~~~~~~~~GT~~y~aPE~~~~~~~~~~~DiwSlG~~l~elltg~~Pf~~~~~~~~~~  223 (293)
T d1csna_         144 MIYVVDFGMVKFYRDPVTKQHIPYREKKNLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKAATNKQ  223 (293)
T ss_dssp             CEEECCCTTCEESBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCSCCHHH
T ss_pred             ceEEcccceeEEcccCccccceeecccCceEEchhhcCHHHhcCCCCChHHHHHHhhHHHHHHHhCCCcCCCccchhHHH
Confidence            7999999999764432211     22345579999999999999999999999999999999999999997544331100


Q ss_pred             e---e-----eecCcchhhhhHHHHHHHHHHHHhcCCCCCChHHHHHHHHHHHHH
Q 018699          280 L---V-----YLPKLSFKRYWKVELWKSLFTNLLNMSSGNDKEVLQNLQKSFQDY  326 (351)
Q Consensus       280 ~---~-----~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~~~~~~~  326 (351)
                      .   .     ..+...+....+ +.+.+++..|+..+|+.||+...+ ...|++.
T Consensus       224 ~~~~i~~~~~~~~~~~l~~~~p-~~l~~ii~~~~~~~~~~rP~y~~l-~~~l~~~  276 (293)
T d1csna_         224 KYERIGEKKQSTPLRELCAGFP-EEFYKYMHYARNLAFDATPDYDYL-QGLFSKV  276 (293)
T ss_dssp             HHHHHHHHHHHSCHHHHTTTSC-HHHHHHHHHHHHCCTTCCCCHHHH-HHHHHHH
T ss_pred             HHHHHHhccCCCChHHhcCCCC-HHHHHHHHHHhcCCcccCcCHHHH-HHHHHHH
Confidence            0   0     001111112233 679999999999999999976443 3334333

>d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tie2 kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=6.5e-46  Score=331.01  Aligned_cols=254  Identities=12%  Similarity=0.084  Sum_probs=192.2

Q ss_pred             EcCeeEEEEEEeeccCceEEEEEEecCCCCc--eEEEEecCCCCCh--HHHHHHHHHhhhccc-cccccccceeeecccC
Q 018699           45 IGGKKYQIKGCAGQGGFAKVFKAYVNGDPED--VVALKIQKPAFPW--EFYMYRQLDQRISGR-ERSSFGFAHRIHLYSD  119 (351)
Q Consensus        45 i~~~~Y~i~~~lg~G~~g~V~~a~~~~~~~~--~vaiK~~~~~~~~--e~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~  119 (351)
                      |.-++|++.++||+|+||+||+|++. .+|.  .||||.+......  .....+++ ..+... .|++++.+..++...+
T Consensus         7 i~~~~~~~~~~iG~G~fg~Vy~~~~~-~~~~~~~vaiK~~~~~~~~~~~~~~~~E~-~~l~~l~~HpnIv~~~~~~~~~~   84 (309)
T d1fvra_           7 LDWNDIKFQDVIGEGNFGQVLKARIK-KDGLRMDAAIKRMKEYASKDDHRDFAGEL-EVLCKLGHHPNIINLLGACEHRG   84 (309)
T ss_dssp             CCGGGCEEEEEEECGGGCEEEEEEEE-ETTEEEEEEEEEEECC------CHHHHHH-HHHTTCCCCTTBCCEEEEEEETT
T ss_pred             cCHHHcEEEEEEeeCCCcEEEEEEEC-CCCeEEEEEEEEECcccChHHHHHHHHHH-HHHHhccCCCCEeeEEEEEecCC
Confidence            34578999999999999999999964 4444  5778876543221  11223333 223333 6899999999999999


Q ss_pred             eeEEEEEecCCCCHHHHHHHHH------------hhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecC
Q 018699          120 YSILVCDYLSQGTLQDAINSYV------------VIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYAR  187 (351)
Q Consensus       120 ~~~lv~e~~~~~sL~~~l~~~~------------~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~  187 (351)
                      .+++||||+++|+|.+++....            ..+..+++..+..++.||+.|+.|||+++|+||||||+||+++   
T Consensus        85 ~~~iV~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~~lH~~~iiHrDlkp~NIL~~---  161 (309)
T d1fvra_          85 YLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVG---  161 (309)
T ss_dssp             EEEEEECCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEC---
T ss_pred             eeEEEEEecCCCcHHHHHhhccccccchhhhccccccCCCCHHHHHHHHHHHHHHHHhhhcCCccccccccceEEEc---
Confidence            9999999999999999987531            1235789999999999999999999999999999999999999   


Q ss_pred             CcceeeccCCCCCcccCCeEEeecCCccccccCCCCccccccccCCCcccceeccCCCCCccchHhHHHHHHHHHHhCcc
Q 018699          188 DELTVLDHDRSGPWQDQGLCLVDWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQEKKPWKFQVDTYGLCAIVHMMLHNSY  267 (351)
Q Consensus       188 ~~~~~~~~~~~~~~~~~~~~l~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~  267 (351)
                                    .++.+||+|||++......   .......||..|+|||.+.+..++.++|||||||++|+|++|..
T Consensus       162 --------------~~~~~kl~DfG~a~~~~~~---~~~~~~~gt~~y~aPE~l~~~~~~~~sDvwSfGvil~ell~~~~  224 (309)
T d1fvra_         162 --------------ENYVAKIADFGLSRGQEVY---VKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGG  224 (309)
T ss_dssp             --------------GGGCEEECCTTCEESSCEE---CCC----CCTTTCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSC
T ss_pred             --------------CCCceEEcccccccccccc---ccccceecCCcccchHHhccCCCCccceeehhHHHHHHHHhcCC
Confidence                          7788999999998643321   22234468999999999999999999999999999999999765


Q ss_pred             -ccccccCCCCCce-eeecCcchhhhhHHHHHHHHHHHHhcCCCCCChHHHHHHHH
Q 018699          268 -MEIEKKASPDGGL-VYLPKLSFKRYWKVELWKSLFTNLLNMSSGNDKEVLQNLQK  321 (351)
Q Consensus       268 -p~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~~  321 (351)
                       ||...+....... ......+.+..++ +.+.+||.+||+.||++|||+.+++.+
T Consensus       225 ~p~~~~~~~~~~~~i~~~~~~~~~~~~~-~~~~~li~~cl~~dP~~RPs~~eil~~  279 (309)
T d1fvra_         225 TPYCGMTCAELYEKLPQGYRLEKPLNCD-DEVYDLMRQCWREKPYERPSFAQILVS  279 (309)
T ss_dssp             CTTTTCCHHHHHHHGGGTCCCCCCTTBC-HHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             CCCCCCCHHHHHHHHHhcCCCCCCccCC-HHHHHHHHHHcCCChhHCcCHHHHHHH
Confidence             5644332210000 0112233444455 889999999999999999999999986

>d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Insulin-like growth factor 1 receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.8e-45  Score=327.87  Aligned_cols=261  Identities=13%  Similarity=0.074  Sum_probs=202.5

Q ss_pred             EEEcCeeEEEEEEeeccCceEEEEEEecC----CCCceEEEEecCCCCChH-HHHHHHHHhhhccccccccccceeeecc
Q 018699           43 IEIGGKKYQIKGCAGQGGFAKVFKAYVNG----DPEDVVALKIQKPAFPWE-FYMYRQLDQRISGRERSSFGFAHRIHLY  117 (351)
Q Consensus        43 ~~i~~~~Y~i~~~lg~G~~g~V~~a~~~~----~~~~~vaiK~~~~~~~~e-~~~~~~~~~~~~~~~~~~~~~~~~~~~~  117 (351)
                      ++|..++|++.+.||+|+||+||+|.++.    .++..||||++....... ...+...........|++++....++..
T Consensus        15 ~ei~~~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~VAvK~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~   94 (308)
T d1p4oa_          15 WEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQ   94 (308)
T ss_dssp             TBCCGGGEEEEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTSCHHHHHHHHHHHHHGGGCCCTTBCCEEEEECS
T ss_pred             eeecHHHeEEeeEEeeCCCeEEEEEEECCcccCCCCcEEEEEEECcccChHHHHHHHHHHHHHHHcCCCCEeeeeeEEec
Confidence            46777899999999999999999998632    345789999987654332 2223333344566678999999999888


Q ss_pred             cCeeEEEEEecCCCCHHHHHHHHHhh------CCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcce
Q 018699          118 SDYSILVCDYLSQGTLQDAINSYVVI------GKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELT  191 (351)
Q Consensus       118 ~~~~~lv~e~~~~~sL~~~l~~~~~~------~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~  191 (351)
                      .+..++||||+++|+|.+++......      -..+++..+..++.|++.||.|||+++|+||||||+||+++       
T Consensus        95 ~~~~~lv~e~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~gl~~LH~~~ivHrDlk~~NiLld-------  167 (308)
T d1p4oa_          95 GQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVA-------  167 (308)
T ss_dssp             SSSCEEEEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHHHTTCBCSCCSGGGEEEC-------
T ss_pred             CCceeEEEeecCCCCHHHHHHhcccccccccccCCCCHHHHHHHHHHHHHHHHHHhhCCeeeceEcCCceeec-------
Confidence            89999999999999999998754211      12468888999999999999999999999999999999999       


Q ss_pred             eeccCCCCCcccCCeEEeecCCccccccCCCCccccccccCCCcccceeccCCCCCccchHhHHHHHHHHHHhCc-cccc
Q 018699          192 VLDHDRSGPWQDQGLCLVDWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQEKKPWKFQVDTYGLCAIVHMMLHNS-YMEI  270 (351)
Q Consensus       192 ~~~~~~~~~~~~~~~~l~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~-~p~~  270 (351)
                                .++.+||+|||++................+|+.|+|||.+.+..++.++||||+||++|+|++|. +||.
T Consensus       168 ----------~~~~~Kl~DFGla~~~~~~~~~~~~~~~~~t~~y~aPe~l~~~~~~~~~Dv~S~G~il~El~t~~~~p~~  237 (308)
T d1p4oa_         168 ----------EDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQ  237 (308)
T ss_dssp             ----------TTCCEEECCTTCCCGGGGGGCEEGGGSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTSCCTTT
T ss_pred             ----------CCceEEEeecccceeccCCcceeeccceecccccCCHHHHccCCCCcccccccHHHHHHHHHhCCCCCCC
Confidence                      78889999999997554333333334456899999999999999999999999999999999985 6665


Q ss_pred             cccCCCCCcee-eecCcchhhhhHHHHHHHHHHHHhcCCCCCChHHHHHHHH
Q 018699          271 EKKASPDGGLV-YLPKLSFKRYWKVELWKSLFTNLLNMSSGNDKEVLQNLQK  321 (351)
Q Consensus       271 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~~  321 (351)
                      ..+........ .....+.+..++ +.+.+||.+||+.||++|||+.+++.+
T Consensus       238 ~~~~~~~~~~i~~~~~~~~p~~~~-~~l~~li~~cl~~~P~~RPs~~~il~~  288 (308)
T d1p4oa_         238 GLSNEQVLRFVMEGGLLDKPDNCP-DMLFELMRMCWQYNPKMRPSFLEIISS  288 (308)
T ss_dssp             TSCHHHHHHHHHTTCCCCCCTTCC-HHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             CCCHHHHHHHHHhCCCCCCcccch-HHHHHHHHHHcCCChhHCcCHHHHHHH
Confidence            43322110000 011222334444 789999999999999999999999875

>d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Hepatocyte growth factor receptor, c-MET
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.9e-44  Score=319.97  Aligned_cols=251  Identities=11%  Similarity=0.099  Sum_probs=189.9

Q ss_pred             EEEEEEeeccCceEEEEEEecCCC--CceEEEEecCCCCCh-HHHHHHHHHhhhccccccccccceeeec-ccCeeEEEE
Q 018699           50 YQIKGCAGQGGFAKVFKAYVNGDP--EDVVALKIQKPAFPW-EFYMYRQLDQRISGRERSSFGFAHRIHL-YSDYSILVC  125 (351)
Q Consensus        50 Y~i~~~lg~G~~g~V~~a~~~~~~--~~~vaiK~~~~~~~~-e~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~lv~  125 (351)
                      +.+.++||+|+||+||+|++...+  ...||||.+...... +...+...........|++++.+.++.. .++..++||
T Consensus        29 ~~~~~~iG~G~fg~Vyk~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~~~g~~~~~~~~~~lv~  108 (311)
T d1r0pa_          29 VHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVL  108 (311)
T ss_dssp             EEEEEEEEEETTEEEEEEEECC----CEEEEEEEECCCCCHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEETTTEEEEEE
T ss_pred             eccceEEeecCCeEEEEEEEECCCCEEEEEEEEEECcccCHHHHHHHHHHHHHHHhCCCCCEeEEeEEEEecCCceEEEE
Confidence            344688999999999999964333  346899998754322 2222333334445667899998887765 456889999


Q ss_pred             EecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeeccCCCCCcccCC
Q 018699          126 DYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLDHDRSGPWQDQG  205 (351)
Q Consensus       126 e~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~~~~~~~~~~~~  205 (351)
                      ||+++++|.+++...   ...+++..+..++.|++.||.|||+.+|+||||||+||+++                 .++.
T Consensus       109 E~~~~g~l~~~~~~~---~~~~~~~~~~~i~~qia~gL~~lH~~~iiHrDLK~~NILl~-----------------~~~~  168 (311)
T d1r0pa_         109 PYMKHGDLRNFIRNE---THNPTVKDLIGFGLQVAKGMKFLASKKFVHRDLAARNCMLD-----------------EKFT  168 (311)
T ss_dssp             ECCTTCBHHHHHHCT---TCCCBHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEC-----------------TTCC
T ss_pred             EEeecCchhhhhccc---cccchHHHHHHHHHHHHHhhhhhcccCcccCCccHHhEeEC-----------------CCCC
Confidence            999999999998764   45678888999999999999999999999999999999999                 7788


Q ss_pred             eEEeecCCccccccCCCC--ccccccccCCCcccceeccCCCCCccchHhHHHHHHHHHHhCccccccccCCCCC-ce-e
Q 018699          206 LCLVDWGRGIDLHLFPDN--MEFEGDCRTSGFRCIEMQEKKPWKFQVDTYGLCAIVHMMLHNSYMEIEKKASPDG-GL-V  281 (351)
Q Consensus       206 ~~l~Dfg~a~~~~~~~~~--~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~p~~~~~~~~~~-~~-~  281 (351)
                      +||+|||++.........  .......||+.|+|||.+.+..++.++||||||+++|||++|..||......... .. .
T Consensus       169 ~kL~DFG~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDI~SfGivl~El~t~~~p~~~~~~~~~~~~~i~  248 (311)
T d1r0pa_         169 VKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLL  248 (311)
T ss_dssp             EEECSSGGGCCTTTTTCCCTTCTTCSSCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCC------CHHHHH
T ss_pred             EEEecccchhhccccccccceecccccccccccChHHHhcCCCCChhHhhhhHHHHHHHHHCCCCCCCCCCHHHHHHHHH
Confidence            999999999764432221  2233456889999999999889999999999999999999988777654322110 10 0


Q ss_pred             eecCcchhhhhHHHHHHHHHHHHhcCCCCCChHHHHHHHH
Q 018699          282 YLPKLSFKRYWKVELWKSLFTNLLNMSSGNDKEVLQNLQK  321 (351)
Q Consensus       282 ~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~~  321 (351)
                      .......|..++ +.+.+||.+||+.||++||++.|++++
T Consensus       249 ~g~~~~~p~~~~-~~l~~li~~cl~~dP~~RPs~~ei~~~  287 (311)
T d1r0pa_         249 QGRRLLQPEYCP-DPLYEVMLKCWHPKAEMRPSFSELVSR  287 (311)
T ss_dssp             TTCCCCCCTTCC-HHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             cCCCCCCcccCc-HHHHHHHHHHcCCCHhHCcCHHHHHHH
Confidence            112223344445 789999999999999999999999976

>d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=7.9e-46  Score=336.41  Aligned_cols=254  Identities=19%  Similarity=0.232  Sum_probs=189.3

Q ss_pred             EEEEcCeeEEEEEEeeccCceEEEEEEecCCCCceEEEEecCCCCChHHHH--HHHHHhhhccccccccccceeeecc--
Q 018699           42 TIEIGGKKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFPWEFYM--YRQLDQRISGRERSSFGFAHRIHLY--  117 (351)
Q Consensus        42 ~~~i~~~~Y~i~~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~~~e~~~--~~~~~~~~~~~~~~~~~~~~~~~~~--  117 (351)
                      .+.+ .++|++.++||+|+||+||+|+ +..+|+.||||++.+........  .......+....|++++....++..  
T Consensus        13 ~~~~-~~rY~i~~~LG~G~fg~Vy~a~-~~~~~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~h~~iv~~~~~~~~~~   90 (348)
T d2gfsa1          13 IWEV-PERYQNLSPVGSGAYGSVCAAF-DTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPAR   90 (348)
T ss_dssp             EEEE-ETTEEEEEECGGGTTSSEEEEE-ETTTTEEEEEEECSCTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCS
T ss_pred             cccC-CCCeEEEEEEecCCCeEEEEEE-ECCCCCEEEEEEECchhcChHHHHHHHHHHHHHHhcCCCCeeeEEEEEeecc
Confidence            3444 4789999999999999999999 57889999999998765433222  1111223345567788777766542  


Q ss_pred             ---cCeeEEEEEecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcceeec
Q 018699          118 ---SDYSILVCDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELTVLD  194 (351)
Q Consensus       118 ---~~~~~lv~e~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~~~~  194 (351)
                         ....+++++++.+++|.+++..     ..+++..++.++.||+.||+|||++||+||||||+||+++          
T Consensus        91 ~~~~~~~~~i~~~~~gg~L~~~~~~-----~~l~e~~~~~i~~qil~aL~~LH~~giiHrDiKp~NILi~----------  155 (348)
T d2gfsa1          91 SLEEFNDVYLVTHLMGADLNNIVKC-----QKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN----------  155 (348)
T ss_dssp             STTTCCCCEEEEECCSEEHHHHHTT-----CCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEC----------
T ss_pred             ccccCceEEEEEeecCCchhhhccc-----ccccHHHHHHHHHHHHHHHHHHHhCCCcccccCCcccccc----------
Confidence               2334566677779999998854     5799999999999999999999999999999999999999          


Q ss_pred             cCCCCCcccCCeEEeecCCccccccCCCCccccccccCCCcccceeccCC-CCCccchHhHHHHHHHHHHhCcccccccc
Q 018699          195 HDRSGPWQDQGLCLVDWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQEKK-PWKFQVDTYGLCAIVHMMLHNSYMEIEKK  273 (351)
Q Consensus       195 ~~~~~~~~~~~~~l~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~-~~~~~~DiwslG~il~~l~~g~~p~~~~~  273 (351)
                             .++.++++|||.+...     .....+..|++.|+|||...+. .++.++|||||||++|+|++|.+||...+
T Consensus       156 -------~~~~~kl~dfg~a~~~-----~~~~~~~~g~~~y~apE~~~~~~~~~~~~DiwSlGv~l~~ll~g~~pF~~~~  223 (348)
T d2gfsa1         156 -------EDCELKILDFGLARHT-----DDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTD  223 (348)
T ss_dssp             -------TTCCEEECCC----CC-----TGGGSSSCHHHHTSCHHHHTTCSCCCTTHHHHHHHHHHHHHHHSSCSCCCSS
T ss_pred             -------ccccccccccchhccc-----CcccccccccccccCchhhcCCccCCcccchhhhhHHHHHHHhCCCCCCCCC
Confidence                   7788999999988543     3344556789999999987665 45799999999999999999999986432


Q ss_pred             CCCC----------------------------CceeeecCcchhh---hhHHHHHHHHHHHHhcCCCCCChHHHHHHHHH
Q 018699          274 ASPD----------------------------GGLVYLPKLSFKR---YWKVELWKSLFTNLLNMSSGNDKEVLQNLQKS  322 (351)
Q Consensus       274 ~~~~----------------------------~~~~~~~~~~~~~---~~~~~~~~~li~~~L~~dP~~R~s~~e~l~~~  322 (351)
                      ....                            ......+...+..   ..+ +.+++||.+||.+||++|||+.|+|+||
T Consensus       224 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s-~~~~dli~~mL~~dP~~R~ta~elL~Hp  302 (348)
T d2gfsa1         224 HIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGAN-PLAVDLLEKMLVLDSDKRITAAQALAHA  302 (348)
T ss_dssp             HHHHHHHHHHHHCCCCHHHHTTCCCHHHHHHHTTSCCCCCCCHHHHSTTCC-HHHHHHHHHHSCSSGGGSCCHHHHHTSG
T ss_pred             HHHHHHHHHHhcCCCChHHhhhccchhhhhhhhhcccCCCcchhhhcCCCC-HHHHHHHHHHCcCChhhCcCHHHHhcCH
Confidence            1100                            0000011111111   123 7889999999999999999999999999


Q ss_pred             HHH
Q 018699          323 FQD  325 (351)
Q Consensus       323 ~~~  325 (351)
                      |..
T Consensus       303 ~f~  305 (348)
T d2gfsa1         303 YFA  305 (348)
T ss_dssp             GGT
T ss_pred             hhC
Confidence            754

>d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Type I TGF-beta receptor R4
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=6.8e-44  Score=316.72  Aligned_cols=248  Identities=15%  Similarity=0.158  Sum_probs=184.0

Q ss_pred             eeEEEEEEeeccCceEEEEEEecCCCCceEEEEecCCCCChHHHHHHHHHhhhccccccccccceeeeccc----CeeEE
Q 018699           48 KKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFPWEFYMYRQLDQRISGRERSSFGFAHRIHLYS----DYSIL  123 (351)
Q Consensus        48 ~~Y~i~~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~l  123 (351)
                      ++|.+.+.||+|+||+||+|++   +|+.||||++......+.....++. ......|++++.+..+....    ..+|+
T Consensus         3 ~~~~l~~~iG~G~fg~Vy~~~~---~g~~vAvK~~~~~~~~~~~~e~ei~-~~~~~~HpnIv~~~~~~~~~~~~~~~~~l   78 (303)
T d1vjya_           3 RTIVLQESIGKGRFGEVWRGKW---RGEEVAVKIFSSREERSWFREAEIY-QTVMLRHENILGFIAADNKDNGTWTQLWL   78 (303)
T ss_dssp             GGEEEEEEEECCSSSEEEEEEE---TTEEEEEEEECGGGHHHHHHHHHHH-TSTTCCCTTBCCEEEEEEEECSSSEEEEE
T ss_pred             cEEEEEEEEeeCCCeEEEEEEE---CCEEEEEEEECccchhHHHHHHHHH-HHhhCCCCcCcceEEEEEeCCCcceEEEE
Confidence            5799999999999999999995   4789999998754322222222222 23345688888888776543    36799


Q ss_pred             EEEecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHH--------CCceecCCCCCcEEEeecCCcceeecc
Q 018699          124 VCDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHD--------VGIIHGDFKPDNLLIRYARDELTVLDH  195 (351)
Q Consensus       124 v~e~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~--------~~i~H~dl~p~Nill~~~~~~~~~~~~  195 (351)
                      ||||+++|+|.+++++     ..+++..++.++.|++.|+.|+|+        +||+||||||+||+++           
T Consensus        79 v~Ey~~~g~L~~~l~~-----~~l~~~~~~~~~~~ia~gl~~lH~~~~~~~~~~~IvHrDlKp~NILl~-----------  142 (303)
T d1vjya_          79 VSDYHEHGSLFDYLNR-----YTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVK-----------  142 (303)
T ss_dssp             EEECCTTCBHHHHHHH-----CCBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCEEECSCCCGGGEEEC-----------
T ss_pred             EEecccCCCHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHHhhhhhccCCCeeccccCccceEEc-----------
Confidence            9999999999999976     468899999999999999999996        5999999999999999           


Q ss_pred             CCCCCcccCCeEEeecCCccccccCCCC--ccccccccCCCcccceeccCCC------CCccchHhHHHHHHHHHHhCcc
Q 018699          196 DRSGPWQDQGLCLVDWGRGIDLHLFPDN--MEFEGDCRTSGFRCIEMQEKKP------WKFQVDTYGLCAIVHMMLHNSY  267 (351)
Q Consensus       196 ~~~~~~~~~~~~l~Dfg~a~~~~~~~~~--~~~~~~~g~~~y~aPE~~~~~~------~~~~~DiwslG~il~~l~~g~~  267 (351)
                            .++.+||+|||++.........  .......||+.|+|||++.+..      ++.++|||||||++|||++|..
T Consensus       143 ------~~~~~Kl~DFGl~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~k~Di~S~Gvvl~el~tg~~  216 (303)
T d1vjya_         143 ------KNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCS  216 (303)
T ss_dssp             ------TTSCEEECCCTTCEEEETTTTEECC----CCSCGGGCCHHHHTTCSCTTCHHHHHHHHHHHHHHHHHHHHHTBC
T ss_pred             ------CCCCeEEEecCccccccCCCcceeccccceecccCcCChhhccccccccCCCcCcchhhhhhHHHHHHHhhCCC
Confidence                  7888999999998754322211  1234567999999999986542      5678999999999999999988


Q ss_pred             ccccccCCCCCcee-----------------eecCcchhhhh----HHHHHHHHHHHHhcCCCCCChHHHHHHHH
Q 018699          268 MEIEKKASPDGGLV-----------------YLPKLSFKRYW----KVELWKSLFTNLLNMSSGNDKEVLQNLQK  321 (351)
Q Consensus       268 p~~~~~~~~~~~~~-----------------~~~~~~~~~~~----~~~~~~~li~~~L~~dP~~R~s~~e~l~~  321 (351)
                      ||............                 ....+..+..+    ....+.+|+.+||+.||.+|||+.|++++
T Consensus       217 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~ei~~~  291 (303)
T d1vjya_         217 IGGIHEDYQLPYYDLVPSDPSVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKT  291 (303)
T ss_dssp             BTTBCCCCCCTTTTTSCSSCCHHHHHHHHTTSCCCCCCCGGGGGCHHHHHHHHHHHTTCCSSGGGSCCHHHHHHH
T ss_pred             CCCcccccccchhhcccccchHHHHHHHHhccccCCCCCcccCChHHHHHHHHHHHHHcccCHhHCcCHHHHHHH
Confidence            87543322110000                 00111222222    11568899999999999999999998764

>d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Sky1p
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=100.00  E-value=1.8e-41  Score=309.26  Aligned_cols=260  Identities=15%  Similarity=0.195  Sum_probs=184.1

Q ss_pred             cCeeEEEEEEeeccCceEEEEEEecCCCCceEEEEecCCCCC------hHHHHHHHHHhhhc----cccccccccceeee
Q 018699           46 GGKKYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFP------WEFYMYRQLDQRIS----GRERSSFGFAHRIH  115 (351)
Q Consensus        46 ~~~~Y~i~~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~~------~e~~~~~~~~~~~~----~~~~~~~~~~~~~~  115 (351)
                      .++||+++++||+|+||+||+|+ +..+|+.||||++.++..      .|...++.+.+...    ...+++++....+.
T Consensus        11 ~~~rY~i~~~LG~G~fg~Vy~~~-~~~~g~~vAvKvi~~~~~~~~~~~~Ei~~l~~l~~~~~~~~~~~~~~~iv~~~~~~   89 (362)
T d1q8ya_          11 KDARYILVRKLGWGHFSTVWLAK-DMVNNTHVAMKIVRGDKVYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLDHF   89 (362)
T ss_dssp             TTTTEEEEEEEEECSSEEEEEEE-ETTTTEEEEEEEECSCHHHHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCCCEEE
T ss_pred             cCCcEEEEEEEeeCCCeEEEEEE-ECCCCCEEEEEEEeccccchHHHHHHHHHHHHhcchhhhhhhhcCcCceEEEEEEe
Confidence            44679999999999999999999 678899999999986532      23444444444321    12345555555444


Q ss_pred             c--ccCeeEEEEEecCCCCH-HHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHH-CCceecCCCCCcEEEeecCCcce
Q 018699          116 L--YSDYSILVCDYLSQGTL-QDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHD-VGIIHGDFKPDNLLIRYARDELT  191 (351)
Q Consensus       116 ~--~~~~~~lv~e~~~~~sL-~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~-~~i~H~dl~p~Nill~~~~~~~~  191 (351)
                      .  .....+++++++..+.. ........  ...+++..++.++.||+.|+.|||+ .||+||||||+||+++.++... 
T Consensus        90 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~i~~i~~qil~al~~lh~~~~IvHrDlKp~NIll~~~~~~~-  166 (362)
T d1q8ya_          90 NHKGPNGVHVVMVFEVLGENLLALIKKYE--HRGIPLIYVKQISKQLLLGLDYMHRRCGIIHTDIKPENVLMEIVDSPE-  166 (362)
T ss_dssp             EEEETTEEEEEEEECCCCEEHHHHHHHTT--TSCCCHHHHHHHHHHHHHHHHHHHHTTCEECSCCSGGGEEEEEEETTT-
T ss_pred             eeccccceeeeeeeccccccccccccccc--ccCCcHHHHHHHHHHHHHHHHHHhhhcCcccccCChhHeeeeccCccc-
Confidence            3  34566677777654433 33322221  4678999999999999999999998 8999999999999998543321 


Q ss_pred             eeccCCCCCcccCCeEEeecCCccccccCCCCccccccccCCCcccceeccCCCCCccchHhHHHHHHHHHHhCcccccc
Q 018699          192 VLDHDRSGPWQDQGLCLVDWGRGIDLHLFPDNMEFEGDCRTSGFRCIEMQEKKPWKFQVDTYGLCAIVHMMLHNSYMEIE  271 (351)
Q Consensus       192 ~~~~~~~~~~~~~~~~l~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~p~~~  271 (351)
                                ....++++|||.+....     .......||+.|+|||++.+..++.++||||+||++++|++|..||..
T Consensus       167 ----------~~~~~kl~dfg~s~~~~-----~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~el~~g~~pF~~  231 (362)
T d1q8ya_         167 ----------NLIQIKIADLGNACWYD-----EHYTNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEP  231 (362)
T ss_dssp             ----------TEEEEEECCCTTCEETT-----BCCCSCCSCGGGCCHHHHHTCCCCTHHHHHHHHHHHHHHHHSSCCC--
T ss_pred             ----------ccceeeEeecccccccc-----cccccccccccccChhhccccCCCccccccchHHHHHHHHHCCCCCCC
Confidence                      12238999999986432     223456789999999999999999999999999999999999999864


Q ss_pred             ccCCCCC--------------------------------------ceee----------ecCcchhhhhHHHHHHHHHHH
Q 018699          272 KKASPDG--------------------------------------GLVY----------LPKLSFKRYWKVELWKSLFTN  303 (351)
Q Consensus       272 ~~~~~~~--------------------------------------~~~~----------~~~~~~~~~~~~~~~~~li~~  303 (351)
                      .......                                      ....          ......+...+ +.+.+||.+
T Consensus       232 ~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~dll~~  310 (362)
T d1q8ya_         232 DEGHSYTKDDDHIAQIIELLGELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEA-KEISDFLSP  310 (362)
T ss_dssp             -------CHHHHHHHHHHHHCSCCHHHHHHCTTHHHHBCC--CBSSCCCCCBCCHHHHHHHTTCCCHHHH-HHHHHHHGG
T ss_pred             CccccccchhHHHHHHHHHhCCCCHHHhhcccccccccccchhhhccccccCCchhhhcccccccCcccC-HHHHHHHHH
Confidence            3221000                                      0000          00111122234 789999999


Q ss_pred             HhcCCCCCChHHHHHHHHHHHH
Q 018699          304 LLNMSSGNDKEVLQNLQKSFQD  325 (351)
Q Consensus       304 ~L~~dP~~R~s~~e~l~~~~~~  325 (351)
                      ||.+||.+|||+.|+|+|||..
T Consensus       311 mL~~dP~~Rpta~e~L~Hp~f~  332 (362)
T d1q8ya_         311 MLQLDPRKRADAGGLVNHPWLK  332 (362)
T ss_dssp             GGCSSTTTCBCHHHHHTCGGGT
T ss_pred             HCCCChhHCcCHHHHhcCcccC
Confidence            9999999999999999998643

>d1zara2 d.144.1.9 (A:91-281) Rio2 serine protein kinase C-terminal domain {Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: RIO1-like kinases
domain: Rio2 serine protein kinase C-terminal domain
species: Archaeoglobus fulgidus [TaxId: 2234]

Probab=99.87  E-value=1.3e-22  Score=166.89  Aligned_cols=163  Identities=13%  Similarity=0.166  Sum_probs=101.4

Q ss_pred             EEEEEEeeccCceEEEEEEecCCCCceEEEEecCCCCCh---------------HHHHHHHHHh---hhccccccccccc
Q 018699           50 YQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFPW---------------EFYMYRQLDQ---RISGRERSSFGFA  111 (351)
Q Consensus        50 Y~i~~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~~~---------------e~~~~~~~~~---~~~~~~~~~~~~~  111 (351)
                      |.+.++||+|+||+||+|.+  .+|+.||||+++.....               ..........   .+....+.+++..
T Consensus         2 ~~vg~~IG~G~~g~Vy~a~~--~~g~~vAvKi~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~v~~~   79 (191)
T d1zara2           2 DAIGKLMGEGKESAVFNCYS--EKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKLQGLAVPKV   79 (191)
T ss_dssp             SEEEEEEEECSSEEEEEEEE--TTTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHTTTSSSCCE
T ss_pred             chhCCEeeeCcceEEEEEEC--CCCCEEEEEEEecccchhhhhhhhhhhccHHHHHHHHHHHHHHHHHHHHccCCCcceE
Confidence            46899999999999999984  45889999986532110               0000000011   1111122222222


Q ss_pred             eeeecccCeeEEEEEecCCCCHHHHHHHHHhhCCChhHHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEeecCCcce
Q 018699          112 HRIHLYSDYSILVCDYLSQGTLQDAINSYVVIGKSMEEVLCIYYTIEMLCILESLHDVGIIHGDFKPDNLLIRYARDELT  191 (351)
Q Consensus       112 ~~~~~~~~~~~lv~e~~~~~sL~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~Nill~~~~~~~~  191 (351)
                      ..  .  ...+++|||+++..+.           .++...+..++.|++.++++||++||+||||||+||+++       
T Consensus        80 ~~--~--~~~~lvme~~~~~~~~-----------~l~~~~~~~i~~ql~~~l~~lH~~giiHrDiKP~NILv~-------  137 (191)
T d1zara2          80 YA--W--EGNAVLMELIDAKELY-----------RVRVENPDEVLDMILEEVAKFYHRGIVHGDLSQYNVLVS-------  137 (191)
T ss_dssp             EE--E--ETTEEEEECCCCEEGG-----------GCCCSCHHHHHHHHHHHHHHHHHTTEECSCCSTTSEEEE-------
T ss_pred             EE--e--cCCEEEEEeecccccc-----------chhhHHHHHHHHHHHHHHHHHhhCCEEEccCChhheeee-------
Confidence            21  1  2237999999775432           244555678899999999999999999999999999998       


Q ss_pred             eeccCCCCCcccCCeEEeecCCccccccCCCCccccccccCCCcccc--e---eccCCCCCccchHhHHHH
Q 018699          192 VLDHDRSGPWQDQGLCLVDWGRGIDLHLFPDNMEFEGDCRTSGFRCI--E---MQEKKPWKFQVDTYGLCA  257 (351)
Q Consensus       192 ~~~~~~~~~~~~~~~~l~Dfg~a~~~~~~~~~~~~~~~~g~~~y~aP--E---~~~~~~~~~~~DiwslG~  257 (351)
                                .+ .++|+|||+|....  +++.        ..|...  +   .+..+.|+..+|+||+.-
T Consensus       138 ----------~~-~~~liDFG~a~~~~--~~~~--------~~~l~rd~~~~~~~f~r~y~~~~d~~s~~~  187 (191)
T d1zara2         138 ----------EE-GIWIIDFPQSVEVG--EEGW--------REILERDVRNIITYFSRTYRTEKDINSAID  187 (191)
T ss_dssp             ----------TT-EEEECCCTTCEETT--STTH--------HHHHHHHHHHHHHHHHHHHCCCCCHHHHHH
T ss_pred             ----------CC-CEEEEECCCcccCC--CCCc--------HHHHHHHHHHHHHHHcCCCCCcccHHHHHH
Confidence                      33 38899999986432  1111        011111  0   012356678899999753

>d1j7la_ d.144.1.6 (A:) Type IIIa 3',5"-aminoglycoside phosphotransferase {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Type IIIa 3',5"-aminoglycoside phosphotransferase
species: Enterococcus faecalis [TaxId: 1351]

Probab=98.13  E-value=2.5e-06  Score=71.44  Aligned_cols=79  Identities=16%  Similarity=0.095  Sum_probs=45.1

Q ss_pred             eEEEEEEeeccCceEEEEEEecCCCCceEEEEecCCCCC-------hHHHHHHHHHhhhccccccccccceeeecccCee
Q 018699           49 KYQIKGCAGQGGFAKVFKAYVNGDPEDVVALKIQKPAFP-------WEFYMYRQLDQRISGRERSSFGFAHRIHLYSDYS  121 (351)
Q Consensus        49 ~Y~i~~~lg~G~~g~V~~a~~~~~~~~~vaiK~~~~~~~-------~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  121 (351)
                      .|++++..+-++.+.||+..   .+++.+++|.......       .|...+..+..    .  ...+.+......++..
T Consensus        15 ~~~~~~~~~G~s~~~v~rv~---~~~~~~vlk~~~~~~~~~~~~~~~E~~~l~~l~~----~--vpvP~vl~~~~~~~~~   85 (263)
T d1j7la_          15 KYRCVKDTEGMSPAKVYKLV---GENENLYLKMTDSRYKGTTYDVEREKDMMLWLEG----K--LPVPKVLHFERHDGWS   85 (263)
T ss_dssp             TSEEEECSCCCSSSEEEEEE---CSSCEEEEEEECGGGTTSTTCHHHHHHHHHHHTT----T--SCCCCEEEEEEETTEE
T ss_pred             ceEEEEcCCCCCCCcEEEEE---eCCCeEEEEEcCCCcccchhhHHHHHHHHHHHhc----c--CCCCcEEEEEecCCce
Confidence            45666665555567899887   2345567887653221       12222222221    1  1123334444556788


Q ss_pred             EEEEEecCCCCHHHH
Q 018699          122 ILVCDYLSQGTLQDA  136 (351)
Q Consensus       122 ~lv~e~~~~~sL~~~  136 (351)
                      ++||++++|.++.+.
T Consensus        86 ~lv~~~l~G~~~~~~  100 (263)
T d1j7la_          86 NLLMSEADGVLCSEE  100 (263)
T ss_dssp             EEEEECCSSEEHHHH
T ss_pred             EEEEEeccccccccc
Confidence            999999998887553

>d1nd4a_ d.144.1.6 (A:) Aminoglycoside 3'-phosphotransferase IIa (Kanamycin kinase) {Bacteria (Klebsiella pneumoniae) [TaxId: 573]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Aminoglycoside 3'-phosphotransferase IIa (Kanamycin kinase)
species: Bacteria (Klebsiella pneumoniae) [TaxId: 573]

Probab=97.84  E-value=5.3e-05  Score=62.65  Aligned_cols=74  Identities=12%  Similarity=-0.027  Sum_probs=41.5

Q ss_pred             eccC-ceEEEEEEecCCCCceEEEEecCCCCChHHHHHHHHHhhhccccccccccceeeecccCeeEEEEEecCCCCH
Q 018699           57 GQGG-FAKVFKAYVNGDPEDVVALKIQKPAFPWEFYMYRQLDQRISGRERSSFGFAHRIHLYSDYSILVCDYLSQGTL  133 (351)
Q Consensus        57 g~G~-~g~V~~a~~~~~~~~~vaiK~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~sL  133 (351)
                      ..|. .+.||+...  ..+..+++|.................+.+..... ..+.+......++..++||++++|.++
T Consensus        19 ~~G~s~~~v~r~~~--~~~~~~vlK~~~~~~~~~l~~E~~~l~~L~~~gv-pvP~v~~~~~~~~~~~~v~~~i~G~~~   93 (255)
T d1nd4a_          19 TIGCSDAAVFRLSA--QGRPVLFVKTDLSGALNELQDEAARLSWLATTGV-PCAAVLDVVTEAGRDWLLLGEVPGQDL   93 (255)
T ss_dssp             SCTTSSCEEEEEEC--TTSCCEEEEEECSCTTSCHHHHHHHHHHHHTTTC-CBCCEEEEEECSSCEEEEEECCSSEET
T ss_pred             CCcccCCeEEEEEe--CCCCEEEEEeCCccCHhHHHHHHHHHHHHHhcCC-CCCceeeecccccceEEEEEeeecccc
Confidence            3444 368999973  4566788998776544332222222222222111 133344444556788999999987654

>d2pula1 d.144.1.6 (A:5-396) Methylthioribose kinase MtnK {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Methylthioribose kinase MtnK
species: Bacillus subtilis [TaxId: 1423]

Probab=97.69  E-value=0.0001  Score=65.31  Aligned_cols=28  Identities=21%  Similarity=0.417  Sum_probs=20.5

Q ss_pred             EEEeeccCceEEEEEEecCCCCceEEEEe
Q 018699           53 KGCAGQGGFAKVFKAYVNGDPEDVVALKI   81 (351)
Q Consensus        53 ~~~lg~G~~g~V~~a~~~~~~~~~vaiK~   81 (351)
                      .+.||.|....||++. +..+++.|++|.
T Consensus        31 ~~eig~G~~N~vfrV~-~~~~~~svivKq   58 (392)
T d2pula1          31 CQEIGDGNLNYVFHIY-DQEHDRALIIKQ   58 (392)
T ss_dssp             EEECCSSSSEEEEEEE-C----CEEEEEE
T ss_pred             EEEeCCCceEeEEEEE-eCCCCeEEEEec
Confidence            4578999999999998 556678899995

>d1zyla1 d.144.1.6 (A:4-328) RdoA {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: RdoA
species: Escherichia coli [TaxId: 562]

Probab=97.03  E-value=0.0018  Score=55.36  Aligned_cols=69  Identities=9%  Similarity=-0.082  Sum_probs=36.9

Q ss_pred             ceEEEEEEecCCCCceEEEEecCCCCChHHHH------HHHHHhhhccccccccccceeeecccCeeEEEEEecCCC
Q 018699           61 FAKVFKAYVNGDPEDVVALKIQKPAFPWEFYM------YRQLDQRISGRERSSFGFAHRIHLYSDYSILVCDYLSQG  131 (351)
Q Consensus        61 ~g~V~~a~~~~~~~~~vaiK~~~~~~~~e~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~  131 (351)
                      ...||++..  .+|+.|++|+.++.......+      +..+.....-...+....-.......+..+.+++++.|.
T Consensus        35 EN~vy~v~~--~dg~~~VlK~~rp~~~s~~~i~~E~~~l~~L~~~gipv~~p~~~~g~~~~~~~~~~~~l~~~~~G~  109 (325)
T d1zyla1          35 ENRVYQFQD--EDRRRFVVKFYRPERWTADQILEEHQFALQLVNDEVPVAAPVAFNGQTLLNHQGFYFAVFPSVGGR  109 (325)
T ss_dssp             SSEEEEECC--TTCCCEEEEEECTTTSCHHHHHHHHHHHHHHHHTTCSBCCCCCBTTBSCEEETTEEEEEEECCCCE
T ss_pred             cceeEEEEc--CCCCEEEEEEeCCCCCCHHHHHHHHHHHHHHHhcCCCCCCceecCCCeeeeeeeEEEEEEeecCCc
Confidence            468999983  567889999988764333222      222222111111111111112223466788999998763

>d2ppqa1 d.144.1.6 (A:5-320) Homoserine kinase ThrB {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Homoserine kinase ThrB
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=96.70  E-value=0.0083  Score=50.62  Aligned_cols=29  Identities=31%  Similarity=0.449  Sum_probs=24.6

Q ss_pred             CceecCCCCCcEEEeecCCcceeeccCCCCCcccCCeEEeecCCcc
Q 018699          170 GIIHGDFKPDNLLIRYARDELTVLDHDRSGPWQDQGLCLVDWGRGI  215 (351)
Q Consensus       170 ~i~H~dl~p~Nill~~~~~~~~~~~~~~~~~~~~~~~~l~Dfg~a~  215 (351)
                      |++|+|+.++||+++                 .+...-|+||+.+.
T Consensus       184 giIHgDl~~dNvl~~-----------------~~~v~gvIDF~~~~  212 (316)
T d2ppqa1         184 GVIHADLFQDNVFFL-----------------GDELSGLIDFYFAC  212 (316)
T ss_dssp             EEECSCCCGGGEEEE-----------------TTEEEEECCCTTCE
T ss_pred             ccccCCcchhhhhcc-----------------cccceeEecccccc
Confidence            799999999999999                 45556799999764

>d1nw1a_ d.144.1.8 (A:) Choline kinase {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Choline kinase
domain: Choline kinase
species: Caenorhabditis elegans [TaxId: 6239]

Probab=94.96  E-value=0.11  Score=44.97  Aligned_cols=35  Identities=14%  Similarity=0.146  Sum_probs=23.3

Q ss_pred             eEEEEEEeeccCceEEEEEEecC------CCCceEEEEecCC
Q 018699           49 KYQIKGCAGQGGFAKVFKAYVNG------DPEDVVALKIQKP   84 (351)
Q Consensus        49 ~Y~i~~~lg~G~~g~V~~a~~~~------~~~~~vaiK~~~~   84 (351)
                      ..++ +.|+.|-.-.+|++....      ...+.|++++...
T Consensus        44 ~l~v-~~l~GGltN~~y~v~~~~~~~~~~~~~~~vllRi~g~   84 (395)
T d1nw1a_          44 HLRI-SRIKGGMSNMLFLCRLSEVYPPIRNEPNKVLLRVYFN   84 (395)
T ss_dssp             GEEE-EEECCCTTEEEEEEEECTTSCCSSSCCSEEEEEEECS
T ss_pred             ceEE-EEcCCccccceEEEEeCCCCccccCCCCcEEEEecCC
Confidence            3444 467778888999998532      2346788888763