BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 018704
(351 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|O80874|NDA2_ARATH Alternative NAD(P)H dehydrogenase 2, mitochondrial OS=Arabidopsis
thaliana GN=NDA2 PE=1 SV=1
Length = 508
Score = 519 bits (1337), Expect = e-146, Method: Compositional matrix adjust.
Identities = 269/348 (77%), Positives = 292/348 (83%), Gaps = 12/348 (3%)
Query: 8 LRNPTAKSYSYSSPSIIMPSNLILTCLSHFTTDASPST----VQLTQYSGLGPTKANEKP 63
RN + S SY+ S C + T SP+ V +QYSGL PT+ EKP
Sbjct: 21 FRNSGSSSLSYTLASRF--------CTAQETQIQSPAKIPNDVDRSQYSGLPPTREGEKP 72
Query: 64 RVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRNHMVFTPLLASTCVGTLEFRSVAEPIARI 123
RVVVLGSGWAGCRLMKGIDT+LYDVVCVSPRNHMVFTPLLASTCVGTLEFRSVAEPI+RI
Sbjct: 73 RVVVLGSGWAGCRLMKGIDTNLYDVVCVSPRNHMVFTPLLASTCVGTLEFRSVAEPISRI 132
Query: 124 QPAISREPGSYFFLSHCAGIDTDNHVVHCETVTDELRTLEPWKFKISYDKLVIALGAEAS 183
QPAISREPGS+FFL++C+ +D D H VHCET+TD L TL+PWKFKI+YDKLVIA GAEAS
Sbjct: 133 QPAISREPGSFFFLANCSRLDADAHEVHCETLTDGLNTLKPWKFKIAYDKLVIASGAEAS 192
Query: 184 TFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEKSRLLHCVVVGGGPTGV 243
TFGIHGV ENA FLREVHHAQEIRRKLLLNLMLSD PGIS+EEK RLLHCVVVGGGPTGV
Sbjct: 193 TFGIHGVMENAIFLREVHHAQEIRRKLLLNLMLSDTPGISKEEKRRLLHCVVVGGGPTGV 252
Query: 244 EFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEILSSFDDRLRHYATTQLSKSGVRLVR 303
EFSGELSDFIM+DVRQRY+HVKD IHVTLIEA +ILSSFDDRLR YA QL+KSGVR VR
Sbjct: 253 EFSGELSDFIMKDVRQRYAHVKDDIHVTLIEARDILSSFDDRLRRYAIKQLNKSGVRFVR 312
Query: 304 GIVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKSLDLPKSPGGR 351
GIVKDV SQKLIL+DGTEVPYGLLVWSTGVGPS V+SL LPK P GR
Sbjct: 313 GIVKDVQSQKLILDDGTEVPYGLLVWSTGVGPSPFVRSLGLPKDPTGR 360
>sp|Q8GWA1|NDA1_ARATH Alternative NAD(P)H dehydrogenase 1, mitochondrial OS=Arabidopsis
thaliana GN=NDA1 PE=2 SV=1
Length = 510
Score = 507 bits (1305), Expect = e-143, Method: Compositional matrix adjust.
Identities = 259/346 (74%), Positives = 293/346 (84%), Gaps = 3/346 (0%)
Query: 6 HLLRNPTAKSYSYSSPSIIMPSNLILTCLSHFTTDASPSTVQLTQYSGLGPTKANEKPRV 65
++ RNP +SY+ SS +T D + ++ +Y GL PTK EKPRV
Sbjct: 20 NVFRNP--ESYTLSSRFCTALQKQQVTDTVQAKEDVV-NALEPQRYDGLAPTKEGEKPRV 76
Query: 66 VVLGSGWAGCRLMKGIDTSLYDVVCVSPRNHMVFTPLLASTCVGTLEFRSVAEPIARIQP 125
+VLGSGWAGCR++KGIDTS+YDVVCVSPRNHMVFTPLLASTCVGTLEFRSVAEPI+RIQP
Sbjct: 77 LVLGSGWAGCRVLKGIDTSIYDVVCVSPRNHMVFTPLLASTCVGTLEFRSVAEPISRIQP 136
Query: 126 AISREPGSYFFLSHCAGIDTDNHVVHCETVTDELRTLEPWKFKISYDKLVIALGAEASTF 185
AISREPGSY+FL++C+ +D DNH VHCETVT+ TL+PWKFKI+YDKLV+A GAEASTF
Sbjct: 137 AISREPGSYYFLANCSKLDADNHEVHCETVTEGSSTLKPWKFKIAYDKLVLACGAEASTF 196
Query: 186 GIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEKSRLLHCVVVGGGPTGVEF 245
GI+GV ENA FLREVHHAQEIRRKLLLNLMLS+VPGI E+EK RLLHCVVVGGGPTGVEF
Sbjct: 197 GINGVLENAIFLREVHHAQEIRRKLLLNLMLSEVPGIGEDEKKRLLHCVVVGGGPTGVEF 256
Query: 246 SGELSDFIMRDVRQRYSHVKDYIHVTLIEANEILSSFDDRLRHYATTQLSKSGVRLVRGI 305
SGELSDFIM+DVRQRYSHVKD I VTLIEA +ILSSFDDRLRHYA QL+KSGV+LVRGI
Sbjct: 257 SGELSDFIMKDVRQRYSHVKDDIRVTLIEARDILSSFDDRLRHYAIKQLNKSGVKLVRGI 316
Query: 306 VKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKSLDLPKSPGGR 351
VK+V QKLIL+DGTEVPYG LVWSTGVGPS+ V+SLD PK PGGR
Sbjct: 317 VKEVKPQKLILDDGTEVPYGPLVWSTGVGPSSFVRSLDFPKDPGGR 362
>sp|Q55CD9|NDH_DICDI Probable NADH dehydrogenase OS=Dictyostelium discoideum
GN=DDB_G0270104 PE=3 SV=2
Length = 451
Score = 225 bits (573), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 124/328 (37%), Positives = 196/328 (59%), Gaps = 14/328 (4%)
Query: 28 NLILTCLSHFTTDASPSTVQLTQYSGLGPTKANEKPRVVVLGSGWAGCRLMKGIDTSLYD 87
NLI+ ++ + + S+++ K E ++++LG GW +K +++ YD
Sbjct: 5 NLIIRGRNYISDHLTKSSLEKAIIRRQKRGKVIENEKLIILGCGWGSYSFLKNLNSIKYD 64
Query: 88 VVCVSPRNHMVFTPLLASTCVGTLEFRSVAEPIARIQPAISREPGSYFFL-SHCAGIDTD 146
+ +SPRNH +FTPLL S+ VGTLEFRS+AEP+ +R+ + ++ + I+ +
Sbjct: 65 ITVISPRNHFLFTPLLTSSAVGTLEFRSIAEPVR-----TTRDINEFKYIQASVTSINPE 119
Query: 147 NHVVHCETVTDELRTLEPWKFKISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEI 206
N+ V V +P F++ YDKLVI +G+ +TFGI GV+ENA FL+E+HHA+EI
Sbjct: 120 NNSV---LVKSTFHNEKP--FEMKYDKLVIGVGSRNNTFGIKGVEENANFLKELHHAREI 174
Query: 207 RRKLLLNLMLSDVPGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVK- 265
R+K++ + +P +S EE+ RLL V+VGGG TG+EF+ EL+DF D+ + + V
Sbjct: 175 RQKIIECFERASLPDVSTEERERLLSFVIVGGGATGIEFTSELNDFFSEDLSRLFPFVPV 234
Query: 266 DYIHVTLIEAN-EILSSFDDRLRHYATTQLSKSGVRL-VRGIVKDVDSQKLILNDGTEVP 323
+ + + L+EA+ +ILS+FD +L A SG+ + VK+V +IL++G +P
Sbjct: 235 NEVKIILLEASGKILSTFDQKLVKKALINFRNSGIDVRTHSSVKEVLKDYVILDNGDRIP 294
Query: 324 YGLLVWSTGVGPSTLVKSLDLPKSPGGR 351
YGLLVWSTG+G LVK+ K R
Sbjct: 295 YGLLVWSTGIGQHPLVKNSSFEKDSHDR 322
>sp|Q1JPL4|NDB1_ARATH NAD(P)H dehydrogenase B1, mitochondrial OS=Arabidopsis thaliana
GN=NDB1 PE=1 SV=1
Length = 571
Score = 215 bits (547), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 118/295 (40%), Positives = 178/295 (60%), Gaps = 12/295 (4%)
Query: 65 VVVLGSGWAGCRLMKGIDTSLYDVVCVSPRNHMVFTPLLASTCVGTLEFRSVAEPIARIQ 124
VVVLG+GWAG +K +D + YDV VSP+N+ FTPLL S GT+E RS+ E + I
Sbjct: 52 VVVLGTGWAGISFLKDLDITSYDVQVVSPQNYFAFTPLLPSVTCGTVEARSIVESVRNIT 111
Query: 125 PAISREPGSYFFLSHCAGIDTDNHVVHCETV-TDELRTLEPWKFKISYDKLVIALGAEAS 183
+ E + + C ID N VHC V D+ + +F + YD L++A+GA+ +
Sbjct: 112 KKKNGEI--ELWEADCFKIDHVNQKVHCRPVFKDDPEASQ--EFSLGYDYLIVAVGAQVN 167
Query: 184 TFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEKSRLLHCVVVGGGPTGV 243
TFG GV EN FL+EV AQ IRR ++ + +PG++EE++ R LH V+VGGGPTGV
Sbjct: 168 TFGTPGVLENCHFLKEVEDAQRIRRGVIDCFEKAILPGLTEEQRRRKLHFVIVGGGPTGV 227
Query: 244 EFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANE-ILSSFDDRLRHYATTQLSKSGVRLV 302
EF+ EL DFI+ D+ + Y VK+ + +TLI++ + IL++FD+R+ +A + ++ G+ +
Sbjct: 228 EFAAELHDFIIEDITKIYPSVKELVKITLIQSGDHILNTFDERISSFAEQKFTRDGIDVQ 287
Query: 303 RGI----VKDVDSQKLILNDG--TEVPYGLLVWSTGVGPSTLVKSLDLPKSPGGR 351
G+ V D D + + G +P+GL++WSTGVG ++ GGR
Sbjct: 288 TGMRVMSVTDKDITVKVKSSGELVSIPHGLILWSTGVGTRPVISDFMEQVGQGGR 342
>sp|F4JJJ3|NDB3_ARATH NAD(P)H dehydrogenase B3, mitochondrial OS=Arabidopsis thaliana
GN=NDB3 PE=2 SV=1
Length = 580
Score = 199 bits (507), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 125/319 (39%), Positives = 188/319 (58%), Gaps = 15/319 (4%)
Query: 39 TDASPSTVQLTQYSGLGPTKANEKPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRNHMV 98
++A+PS YS G K +VV+LG+GWAG +K ++ S Y+V +SPRN+
Sbjct: 38 SEANPS------YSNNGVETKTRKRKVVLLGTGWAGASFLKTLNNSSYEVQVISPRNYFA 91
Query: 99 FTPLLASTCVGTLEFRSVAEPIARIQPAISREPGSYFFLSHCAGIDTDNHVVHCETVTDE 158
FTPLL S GT+E RSV EPI I + E F + C ID + V+C +
Sbjct: 92 FTPLLPSVTCGTVEARSVVEPIRNIARKQNVEMS--FLEAECFKIDPGSKKVYCRS-KQG 148
Query: 159 LRTLEPWKFKISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSD 218
+ + +F + YD LVIA GA+++TF I GV+EN FL+EV AQ IR ++ + +
Sbjct: 149 VNSKGKKEFDVDYDYLVIATGAQSNTFNIPGVEENCHFLKEVEDAQRIRSTVIDSFEKAS 208
Query: 219 VPGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIE-ANE 277
+PG++E+E+ R+LH VVVGGGPTGVEF+ EL DF+ D+ + Y K+ + +TL+E A+
Sbjct: 209 LPGLNEQERKRMLHFVVVGGGPTGVEFASELHDFVNEDLVKLYPKAKNLVQITLLEAADH 268
Query: 278 ILSSFDDRLRHYATTQLSKSGVRLVRG--IVKDVD---SQKLILNDGTEVPYGLLVWSTG 332
IL+ FD R+ +A + ++ G+ + G +VK D S K + + +PYG++VWSTG
Sbjct: 269 ILTMFDKRITEFAEEKFTRDGIDVKLGSMVVKVNDKEISAKTKAGEVSTIPYGMIVWSTG 328
Query: 333 VGPSTLVKSLDLPKSPGGR 351
+G ++K G R
Sbjct: 329 IGTRPVIKDFMKQIGQGNR 347
>sp|Q94BV7|NDB2_ARATH NAD(P)H dehydrogenase B2, mitochondrial OS=Arabidopsis thaliana
GN=NDB2 PE=1 SV=1
Length = 582
Score = 193 bits (491), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 118/298 (39%), Positives = 178/298 (59%), Gaps = 12/298 (4%)
Query: 61 EKPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRNHMVFTPLLASTCVGTLEFRSVAEPI 120
+K +VV+LG+GWAG +K ++ S Y+V +SPRN+ FTPLL S GT+E RSV EPI
Sbjct: 57 KKKKVVLLGTGWAGTSFLKNLNNSQYEVQIISPRNYFAFTPLLPSVTCGTVEARSVVEPI 116
Query: 121 ARIQPAISREPGSYFFLSHCAGIDTDNHVVHCETVTDELRTLEPWKFKISYDKLVIALGA 180
I + + + + C ID + V+C + L + +F + YD LVIA GA
Sbjct: 117 RNIG---RKNVDTSYLEAECFKIDPASKKVYCRS-KQGLSSNGKKEFSVDYDYLVIATGA 172
Query: 181 EASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEKSRLLHCVVVGGGP 240
+++TF I GV+EN FL+EV AQ IR+ ++ + + +P +S+EE+ R+LH VVVGGGP
Sbjct: 173 QSNTFNIPGVEENCHFLKEVEDAQRIRKTVIDSFEKASLPELSDEERKRILHFVVVGGGP 232
Query: 241 TGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIE-ANEILSSFDDRLRHYATTQLSKSGV 299
TGVEF+ EL DF+ D+ Y K + +TL+E A+ IL+ FD R+ +A + S+ G+
Sbjct: 233 TGVEFAAELHDFVTEDLVSLYPRAKGSVRITLLEAADHILTMFDKRITEFAEEKFSRDGI 292
Query: 300 RLVRGIV------KDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKSLDLPKSPGGR 351
+ G + KD+ S K + + +PYG++VWSTG+G ++K G R
Sbjct: 293 DVKLGSMVTKVNEKDI-SAKTKGGEVSSIPYGMIVWSTGIGTRPVIKDFMKQIGQGNR 349
>sp|O43090|NDH2_SCHPO Probable NADH-ubiquinone oxidoreductase C947.15c, mitochondrial
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=SPBC947.15c PE=3 SV=1
Length = 551
Score = 193 bits (491), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 117/310 (37%), Positives = 169/310 (54%), Gaps = 32/310 (10%)
Query: 62 KPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRNHMVFTPLLASTCVGTLEFRSVAEPI- 120
K +VVLGSGW +K +D SLY++ VSPR+H +FTP+L S VGTL S+ EPI
Sbjct: 90 KKNIVVLGSGWGAVAAIKNLDPSLYNITLVSPRDHFLFTPMLPSCTVGTLRLPSITEPIV 149
Query: 121 ----ARIQPAISREPGSYFFLSHCAGIDTDNHVVHCETVTDELRTLEPWKFKISYDKLVI 176
+I P S + C IDT V T+ E I YD LV
Sbjct: 150 ALFKGKIDP-------SNIHQAECTAIDTSAKKVTIRGTTEANEGKEAV---IPYDTLVF 199
Query: 177 ALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDV---PGISEEEKSRLLHC 233
A+GA TFGI GV+++ FL+E A+++ ++ +L V +S EE++RLLH
Sbjct: 200 AIGAGNQTFGIQGVRDHGCFLKEAGDAKKVFNRIF--EILEQVRFNKDLSPEERARLLHI 257
Query: 234 VVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANE-ILSSFDDRLRHYATT 292
VVGGGPTG+EF+ E+ DFI DV+ + ++ IHVTLIEA +L F L Y
Sbjct: 258 TVVGGGPTGMEFAAEMQDFIDNDVKDMFPELQKDIHVTLIEAAPGVLPMFTKSLITYTEN 317
Query: 293 QLSKSGVRLV-RGIVKDVDSQKLILN----DGT----EVPYGLLVWSTGVGPSTLVKSL- 342
++++ + +VKDV+ + LI+ DG+ E+PYG+LVW+ G+ L ++L
Sbjct: 318 LFKNLNIKIMTKTVVKDVNEKNLIVQKTNPDGSKAMQEIPYGMLVWAAGITARPLTRTLM 377
Query: 343 -DLPKSPGGR 351
+P+ G R
Sbjct: 378 SSIPEQSGAR 387
>sp|O14121|NDH1_SCHPO Probable NADH-ubiquinone oxidoreductase C3A11.07, mitochondrial
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=SPAC3A11.07 PE=3 SV=1
Length = 551
Score = 191 bits (484), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 110/293 (37%), Positives = 166/293 (56%), Gaps = 19/293 (6%)
Query: 62 KPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRNHMVFTPLLASTCVGTLEFRSVAEPIA 121
K +VVLG+GW +++ IDTSL++V+ VSPRN+ +FT LL ST G++ RS+ +PI
Sbjct: 91 KKTLVVLGAGWGATSILRTIDTSLFNVIVVSPRNYFLFTSLLPSTATGSVHTRSIVQPIR 150
Query: 122 RIQPAISREPGSY--FFLSHCAGIDTDNHVVHCETVTDELRTLEPWKFKISYDKLVIALG 179
+ R Y F+ + C +D D V+H + T + LE +I YD LV + G
Sbjct: 151 YML----RHKSCYVKFYEAECTDVDADKKVIHIKKTTTDGVDLEQ---EIKYDYLVCSHG 203
Query: 180 AEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEKSRLLHCVVVGGG 239
AE TF I G+ E FL+E+ AQ+IR ++L L + + E + R +H VVVGGG
Sbjct: 204 AETQTFNIPGIAEYGCFLKEIWDAQKIRARILHCLEQAQFKDLPAETRRRYVHTVVVGGG 263
Query: 240 PTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEA-NEILSSFDDRLRHYATTQLSKSG 298
PTG+EF+GE++DFI D++ Y + D VTL+EA +L F +LR Y + S
Sbjct: 264 PTGMEFAGEMADFIEDDLKSWYPELADDFAVTLVEALPSVLPMFSAKLRDYTQSLFDSSH 323
Query: 299 VRL-VRGIVKDVDSQKLILN----DGTE----VPYGLLVWSTGVGPSTLVKSL 342
+++ +K V ++ + + DG++ +PYGLLVW+ G L K L
Sbjct: 324 IKIRTNTALKKVTAENIHVEVKNPDGSKQEEVIPYGLLVWAGGNRARPLTKKL 376
>sp|Q9SKT7|NDB4_ARATH NAD(P)H dehydrogenase B4, mitochondrial OS=Arabidopsis thaliana
GN=NDB4 PE=1 SV=1
Length = 582
Score = 183 bits (465), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 113/289 (39%), Positives = 174/289 (60%), Gaps = 14/289 (4%)
Query: 62 KPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRNHMVFTPLLASTCVGTLEFRSVAEPIA 121
K +VVVLGSGW+G + ++ YDV VSPRN +FTPLL S GT+E RS+ EPI
Sbjct: 63 KKKVVVLGSGWSGYSFLSYLNNPNYDVQVVSPRNFFLFTPLLPSVTNGTVEARSIVEPIR 122
Query: 122 RIQPAISREPGSYFFLSHCAGIDTDNHVVHCETVTDELRTLE-PWKFKISYDKLVIALGA 180
+ R+ G + + C ID N +HC + E +L+ +F + YD L++A+GA
Sbjct: 123 ----GLMRKKGFEYKEAECVKIDASNKKIHCRS--KEGSSLKGTTEFDMDYDILILAVGA 176
Query: 181 EASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEKSRLLHCVVVGGGP 240
+ +TF GV+E+A FL+E A IR ++ + +P ++EEE+ ++LH VVVGGGP
Sbjct: 177 KPNTFNTPGVEEHAYFLKEAEDALNIRHSVIDCFERASLPNLTEEERKKILHFVVVGGGP 236
Query: 241 TGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANE-ILSSFDDRLRHYATTQLSKSGV 299
TGVEFS EL DF+++DV + Y V+++ +TL+EA + IL+ FD R+ +A + + G+
Sbjct: 237 TGVEFSAELHDFLVQDVAKIYPKVQEFTKITLLEAGDHILNMFDKRITAFAEEKFQRDGI 296
Query: 300 RL-----VRGIVKD-VDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKSL 342
L V G+ D + +++ PYG++VWSTG+G ++K
Sbjct: 297 DLKTGSMVVGVTADEISTKERETGKIVSEPYGMVVWSTGIGSRPVIKDF 345
>sp|P40215|NDH1_YEAST External NADH-ubiquinone oxidoreductase 1, mitochondrial
OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
GN=NDE1 PE=1 SV=1
Length = 560
Score = 178 bits (451), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 119/310 (38%), Positives = 183/310 (59%), Gaps = 17/310 (5%)
Query: 40 DASPSTVQLTQYSGLGPTKANEKPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRNHMVF 99
+A+PST Q+ Q S P + K +V+LGSGW L+K +DT+LY+VV VSPRN+ +F
Sbjct: 93 EANPST-QVPQ-SDTFPNGSKRKT-LVILGSGWGSVSLLKNLDTTLYNVVVVSPRNYFLF 149
Query: 100 TPLLASTCVGTLEFRSVAEPIARIQPAISREPGS-YFFLSHCAGIDTDNHVVHCETVTDE 158
TPLL ST VGT+E +S+ EP+ I R G +++ + +D +N + ++
Sbjct: 150 TPLLPSTPVGTIELKSIVEPVRTIA---RRSHGEVHYYEAEAYDVDPENKTIKVKSSAKN 206
Query: 159 LRTLEPWKFKISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSD 218
+ + YD LV+ +GA+ +TFG GV E ++FL+E+ AQEIR K++ ++ +
Sbjct: 207 ----NDYDLDLKYDYLVVGVGAQPNTFGTPGVYEYSSFLKEISDAQEIRLKIMSSIEKAA 262
Query: 219 VPGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEA-NE 277
+ E++RLL VVVGGGPTGVEF+ EL D++ +D+R+ + I VTL+EA
Sbjct: 263 SLSPKDPERARLLSFVVVGGGPTGVEFAAELRDYVDQDLRKWMPELSKEIKVTLVEALPN 322
Query: 278 ILSSFDDRLRHYATTQLSKSGVRL-VRGIVKDVDSQKLILNDG----TEVPYGLLVWSTG 332
IL+ FD L YA + + L ++ +VK VD+ + G +PYG+LVW+TG
Sbjct: 323 ILNMFDKYLVDYAQDLFKEEKIDLRLKTMVKKVDATTITAKTGDGDIENIPYGVLVWATG 382
Query: 333 VGPSTLVKSL 342
P + K+L
Sbjct: 383 NAPREVSKNL 392
>sp|Q07500|NDH2_YEAST External NADH-ubiquinone oxidoreductase 2, mitochondrial
OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
GN=NDE2 PE=1 SV=1
Length = 545
Score = 171 bits (432), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 125/326 (38%), Positives = 184/326 (56%), Gaps = 24/326 (7%)
Query: 34 LSHFTTDASPSTVQLTQYSGLGPTK--------AN--EKPRVVVLGSGWAGCRLMKGIDT 83
L+ +TT A V Y P K AN +K +V+LG+GW L+K +DT
Sbjct: 59 LTFYTTLAGTLYVSYELYKESNPPKQVPQSTAFANGLKKKELVILGTGWGAISLLKKLDT 118
Query: 84 SLYDVVCVSPRNHMVFTPLLASTCVGTLEFRSVAEPIARIQPAISREPGSYFFL-SHCAG 142
SLY+V VSPR+ +FTPLL ST VGT+E +S+ EP+ I R PG ++ +
Sbjct: 119 SLYNVTVVSPRSFFLFTPLLPSTPVGTIEMKSIVEPVRSIA---RRTPGEVHYIEAEALD 175
Query: 143 IDTDNHVVHCETVTDELRTLEPWKFKISYDKLVIALGAEASTFGIHGVKENATFLREVHH 202
+D V ++V+++ E + +SYD LV+++GA+ +TF I GV NA FL+E+
Sbjct: 176 VDPKAKKVMVQSVSED----EYFVSSLSYDYLVVSVGAKTTTFNIPGVYGNANFLKEIED 231
Query: 203 AQEIRRKLLLNLMLSDVPGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYS 262
AQ IR KL+ + + +++ E+ RLL VVVGGGPTGVEF+ EL D+I +D+R+
Sbjct: 232 AQNIRMKLMKTIEQASSFPVNDPERKRLLTFVVVGGGPTGVEFAAELQDYINQDLRKWMP 291
Query: 263 HVKDYIHVTLIEA-NEILSSFDDRLRHYATTQLSKSGVRL-VRGIVKDVDSQKL-ILNDG 319
+ + V LIEA IL+ FD L YA ++ + L V VK V+ + L +G
Sbjct: 292 DLSKEMKVILIEALPNILNMFDKTLIKYAEDLFARDEIDLQVNTAVKVVEPTYIRTLQNG 351
Query: 320 ---TEVPYGLLVWSTGVGPSTLVKSL 342
T++ YG+LVW+TG P K+L
Sbjct: 352 QTNTDIEYGMLVWATGNEPIDFSKTL 377
>sp|F2Z699|NDH2_YARLI External alternative NADH-ubiquinone oxidoreductase, mitochondrial
OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=NDH2
PE=1 SV=1
Length = 582
Score = 169 bits (428), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 123/302 (40%), Positives = 168/302 (55%), Gaps = 16/302 (5%)
Query: 62 KPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRNHMVFTPLLASTCVGTLEFRSVAEPIA 121
K +VVLGSGW +K +DTS Y+V+ VSPRN+ +FTPLL S GT+E RS+ EPI
Sbjct: 112 KKTLVVLGSGWGSVSFLKKLDTSNYNVIVVSPRNYFLFTPLLPSCPTGTIEHRSIMEPIR 171
Query: 122 RIQPAISREPGSYFFLSHCAGIDTDNHVVHCETVTDELRTLEPWKFKISYDKLVIALGAE 181
I ++ + + ID + +V + E E K +I +D LV+ +GA
Sbjct: 172 GI--IRHKQAECQYLEADATKIDHEKRIVTIRSAVSENSKEEVIK-EIPFDYLVVGVGAM 228
Query: 182 ASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEKSRLLHCVVVGGGPT 241
+STFGI GV+ENA FL+E+ AQ+IRR L+ + + E K RLLH VVVGGGPT
Sbjct: 229 SSTFGIPGVQENACFLKEIPDAQQIRRTLMDCIEKAQFEKDPEVRK-RLLHTVVVGGGPT 287
Query: 242 GVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEA-NEILSSFDDRLRHYATTQLSKSGVR 300
GVEF+ EL DF D+R+ ++D VTL+EA +L SF +L Y S +
Sbjct: 288 GVEFAAELQDFFEDDLRKWIPDIRDDFKVTLVEALPNVLPSFSKKLIDYTEKTFSDEKIS 347
Query: 301 -LVRGIVKDVDSQ----KLILNDGT----EVPYGLLVWSTGVGPSTLVKSL--DLPKSPG 349
L + +VK VD + DGT E+PYG LVW+TG +V+ L +P G
Sbjct: 348 ILTKTMVKSVDENVIRAEQTKGDGTKETLEMPYGTLVWATGNTVRPVVRELMSKIPAQKG 407
Query: 350 GR 351
R
Sbjct: 408 SR 409
>sp|P32340|NDI1_YEAST Rotenone-insensitive NADH-ubiquinone oxidoreductase, mitochondrial
OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
GN=NDI1 PE=1 SV=1
Length = 513
Score = 160 bits (406), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 114/344 (33%), Positives = 192/344 (55%), Gaps = 39/344 (11%)
Query: 18 YSSPSIIMPSNLILTCLSHFTTDASPSTVQLTQYSGLGPT----------KANEKPRVVV 67
YS+ ++ +N ++ S +T + SG GPT + ++KP V++
Sbjct: 7 YSNKRLLTSTNTLVRFASTRSTG--------VENSGAGPTSFKTMKVIDPQHSDKPNVLI 58
Query: 68 LGSGWAGCRLMKGIDTSLYDVVCVSPRNHMVFTPLLASTCVGTLEFRSVAEPIARIQPAI 127
LGSGW +K IDT Y+V +SPR++ +FTPLL S VGT++ +S+ EPI A+
Sbjct: 59 LGSGWGAISFLKHIDTKKYNVSIISPRSYFLFTPLLPSAPVGTVDEKSIIEPIVNF--AL 116
Query: 128 SREPGSYFFLSHCAGIDTDNHVVHCETVTDELRTLEPWKF---------KISYDKLVIAL 178
++ ++ + I+ D + V ++++ + +P +I YD L+ A+
Sbjct: 117 KKKGNVTYYEAEATSINPDRNTVTIKSLSAVSQLYQPENHLGLHQAEPAEIKYDYLISAV 176
Query: 179 GAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEKSRLLHCVVVGG 238
GAE +TFGI GV + FL+E+ ++ EIRR NL +++ + E+ RLL VVVGG
Sbjct: 177 GAEPNTFGIPGVTDYGHFLKEIPNSLEIRRTFAANLEKANLLPKGDPERRRLLSIVVVGG 236
Query: 239 GPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEI-LSSFDDRLRHYATTQLSKS 297
GPTGVE +GEL D++ +D+R+ + + + + L+EA I L+ F+ +L YA + L +
Sbjct: 237 GPTGVEAAGELQDYVHQDLRKFLPALAEEVQIHLVEALPIVLNMFEKKLSSYAQSHLENT 296
Query: 298 GVRL-VRGIVKDVDSQKLILN----DG--TE--VPYGLLVWSTG 332
+++ +R V V+ ++L+ DG TE +PYG L+W+TG
Sbjct: 297 SIKVHLRTAVAKVEEKQLLAKTKHEDGKITEETIPYGTLIWATG 340
>sp|P00393|DHNA_ECOLI NADH dehydrogenase OS=Escherichia coli (strain K12) GN=ndh PE=1
SV=2
Length = 434
Score = 102 bits (253), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 86/270 (31%), Positives = 133/270 (49%), Gaps = 26/270 (9%)
Query: 89 VCVSPRNH-MVFTPLLASTCVGTLEFRSVAEPIARIQPAISREPGSYFFLSHCAGIDTDN 147
+ + RNH ++ PLL G+L+ + ++ + A +R G F L ID +
Sbjct: 36 ITLVDRNHSHLWKPLLHEVATGSLD--EGVDALSYL--AHARNHGFQFQLGSVIDIDREA 91
Query: 148 HVVHCETVTDELRTLEPWKFKISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIR 207
+ + DE L + KI+YD LV+ALG+ ++ F GVKEN FL H A+
Sbjct: 92 KTITIAELRDEKGELLVPERKIAYDTLVMALGSTSNDFNTPGVKENCIFLDNPHQARRFH 151
Query: 208 RKLLLNLMLSDVPGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSH---- 263
++ +LNL L + K ++ +VGGG TGVE S EL + V+Q +S+
Sbjct: 152 QE-MLNLFLKYSANLGANGK---VNIAIVGGGATGVELSAELHN----AVKQLHSYGYKG 203
Query: 264 -VKDYIHVTLIEANE-ILSSFDDRLRHYATTQLSKSGVR-LVRGIVKDVDSQKLILNDGT 320
+ ++VTL+EA E IL + R+ A +L+K GVR L + +V D L DG
Sbjct: 204 LTNEALNVTLVEAGERILPALPPRISAAAHNELTKLGVRVLTQTMVTSADEGGLHTKDGE 263
Query: 321 EVPYGLLVWSTGVGPSTLVKSLDLPKSPGG 350
+ L+VW+ G +K+ D K GG
Sbjct: 264 YIEADLMVWAAG------IKAPDFLKDIGG 287
>sp|Q8NXG0|Y823_STAAW NADH dehydrogenase-like protein MW0823 OS=Staphylococcus aureus
(strain MW2) GN=MW0823 PE=3 SV=1
Length = 402
Score = 93.2 bits (230), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 82/298 (27%), Positives = 138/298 (46%), Gaps = 41/298 (13%)
Query: 59 ANEKPRVVVLGSGWAG----CRLMKGIDTSLYDVVCVSPRNHMVFTPLLASTCVGTLEFR 114
A ++ +V+VLG+G+AG +L K I T ++ ++ + L GTL +
Sbjct: 2 AQDRKKVLVLGAGYAGLQTVTKLQKAISTEEAEITLINKNEYHYEATWLHEASAGTLNYE 61
Query: 115 SVAEPIARIQPAISREPGSYFFLSHCAGIDTDNHVVHCETVTDELRTLEPWKFKISYDKL 174
V P+ ++ ++ F + ID D + +E + +D L
Sbjct: 62 DVLYPV----ESVLKKDKVNFVQAEVTKIDRD------------AKKVETNQGIYDFDIL 105
Query: 175 VIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEKSRLLHCV 234
V+ALG + TFGI G+K++A + V A+E+ R + S+E+ L +
Sbjct: 106 VVALGFVSETFGIEGMKDHAFQIENVITARELSRHIEDKFANY---AASKEKDDNDLSIL 162
Query: 235 VVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN-EILSSFDDRLRHYATTQ 293
V G G TGVEF GEL+D I ++ +Y ++ + +T +EA ++L F + L ++A +
Sbjct: 163 VGGAGFTGVEFLGELTDRI-PELCSKYGVDQNKVKITCVEAAPKMLPMFSEELVNHAVSY 221
Query: 294 LSKSGVRLV----------RGIVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKS 341
L GV +G V +VD +K LN GT VW+ GV S L++
Sbjct: 222 LEDRGVEFKIATPIVACNEKGFVVEVDGEKQQLNAGTS------VWAAGVRGSKLMEE 273
>sp|Q6GAY5|Y811_STAAS NADH dehydrogenase-like protein SAS0811 OS=Staphylococcus aureus
(strain MSSA476) GN=SAS0811 PE=3 SV=1
Length = 402
Score = 93.2 bits (230), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 82/298 (27%), Positives = 138/298 (46%), Gaps = 41/298 (13%)
Query: 59 ANEKPRVVVLGSGWAG----CRLMKGIDTSLYDVVCVSPRNHMVFTPLLASTCVGTLEFR 114
A ++ +V+VLG+G+AG +L K I T ++ ++ + L GTL +
Sbjct: 2 AQDRKKVLVLGAGYAGLQTVTKLQKAISTEEAEITLINKNEYHYEATWLHEASAGTLNYE 61
Query: 115 SVAEPIARIQPAISREPGSYFFLSHCAGIDTDNHVVHCETVTDELRTLEPWKFKISYDKL 174
V P+ ++ ++ F + ID D + +E + +D L
Sbjct: 62 DVLYPV----ESVLKKDKVNFVQAEVTKIDRD------------AKKVETNQGIYDFDIL 105
Query: 175 VIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEKSRLLHCV 234
V+ALG + TFGI G+K++A + V A+E+ R + S+E+ L +
Sbjct: 106 VVALGFVSETFGIEGMKDHAFQIENVITARELSRHIEDKFANY---AASKEKDDNDLSIL 162
Query: 235 VVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN-EILSSFDDRLRHYATTQ 293
V G G TGVEF GEL+D I ++ +Y ++ + +T +EA ++L F + L ++A +
Sbjct: 163 VGGAGFTGVEFLGELTDRI-PELCSKYGVDQNKVKITCVEAAPKMLPMFSEELVNHAVSY 221
Query: 294 LSKSGVRLV----------RGIVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKS 341
L GV +G V +VD +K LN GT VW+ GV S L++
Sbjct: 222 LEDRGVEFKIATPIVACNEKGFVVEVDGEKQQLNAGTS------VWAAGVRGSKLMEE 273
>sp|Q5HHE4|Y944_STAAC NADH dehydrogenase-like protein SACOL0944 OS=Staphylococcus aureus
(strain COL) GN=SACOL0944 PE=3 SV=1
Length = 402
Score = 93.2 bits (230), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 82/298 (27%), Positives = 138/298 (46%), Gaps = 41/298 (13%)
Query: 59 ANEKPRVVVLGSGWAG----CRLMKGIDTSLYDVVCVSPRNHMVFTPLLASTCVGTLEFR 114
A ++ +V+VLG+G+AG +L K I T ++ ++ + L GTL +
Sbjct: 2 AQDRKKVLVLGAGYAGLQTVTKLQKAISTEEAEITLINKNEYHYEATWLHEASAGTLNYE 61
Query: 115 SVAEPIARIQPAISREPGSYFFLSHCAGIDTDNHVVHCETVTDELRTLEPWKFKISYDKL 174
V P+ ++ ++ F + ID D + +E + +D L
Sbjct: 62 DVLYPV----ESVLKKDKVNFVQAEVTKIDRD------------AKKVETNQGIYDFDIL 105
Query: 175 VIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEKSRLLHCV 234
V+ALG + TFGI G+K++A + V A+E+ R + S+E+ L +
Sbjct: 106 VVALGFVSETFGIEGMKDHAFQIENVITARELSRHIEDKFANY---AASKEKDDNDLSIL 162
Query: 235 VVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN-EILSSFDDRLRHYATTQ 293
V G G TGVEF GEL+D I ++ +Y ++ + +T +EA ++L F + L ++A +
Sbjct: 163 VGGAGFTGVEFLGELTDRI-PELCSKYGVDQNKVKITCVEAAPKMLPMFSEELVNHAVSY 221
Query: 294 LSKSGVRLV----------RGIVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKS 341
L GV +G V +VD +K LN GT VW+ GV S L++
Sbjct: 222 LEDRGVEFKIATPIVACNEKGFVVEVDGEKQQLNAGTS------VWAAGVRGSKLMEE 273
>sp|Q99VE0|Y941_STAAM NADH dehydrogenase-like protein SAV0941 OS=Staphylococcus aureus
(strain Mu50 / ATCC 700699) GN=SAV0941 PE=1 SV=1
Length = 402
Score = 93.2 bits (230), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 82/298 (27%), Positives = 138/298 (46%), Gaps = 41/298 (13%)
Query: 59 ANEKPRVVVLGSGWAG----CRLMKGIDTSLYDVVCVSPRNHMVFTPLLASTCVGTLEFR 114
A ++ +V+VLG+G+AG +L K I T ++ ++ + L GTL +
Sbjct: 2 AQDRKKVLVLGAGYAGLQTVTKLQKAISTEEAEITLINKNEYHYEATWLHEASAGTLNYE 61
Query: 115 SVAEPIARIQPAISREPGSYFFLSHCAGIDTDNHVVHCETVTDELRTLEPWKFKISYDKL 174
V P+ ++ ++ F + ID D + +E + +D L
Sbjct: 62 DVLYPV----ESVLKKDKVNFVQAEVTKIDRD------------AKKVETNQGIYDFDIL 105
Query: 175 VIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEKSRLLHCV 234
V+ALG + TFGI G+K++A + V A+E+ R + S+E+ L +
Sbjct: 106 VVALGFVSETFGIEGMKDHAFQIENVITARELSRHIEDKFANY---AASKEKDDNDLSIL 162
Query: 235 VVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN-EILSSFDDRLRHYATTQ 293
V G G TGVEF GEL+D I ++ +Y ++ + +T +EA ++L F + L ++A +
Sbjct: 163 VGGAGFTGVEFLGELTDRI-PELCSKYGVDQNKVKITCVEAAPKMLPMFSEELVNHAVSY 221
Query: 294 LSKSGVRLV----------RGIVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKS 341
L GV +G V +VD +K LN GT VW+ GV S L++
Sbjct: 222 LEDRGVEFKIATPIVACNEKGFVVEVDGEKQQLNAGTS------VWAAGVRGSKLMEE 273
>sp|Q6GIE7|Y903_STAAR NADH dehydrogenase-like protein SAR0903 OS=Staphylococcus aureus
(strain MRSA252) GN=SAR0903 PE=3 SV=1
Length = 402
Score = 93.2 bits (230), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 82/298 (27%), Positives = 138/298 (46%), Gaps = 41/298 (13%)
Query: 59 ANEKPRVVVLGSGWAG----CRLMKGIDTSLYDVVCVSPRNHMVFTPLLASTCVGTLEFR 114
A ++ +V+VLG+G+AG +L K I T ++ ++ + L GTL +
Sbjct: 2 AQDRKKVLVLGAGYAGLQTVTKLQKAISTEEAEITLINKNEYHYEATWLHEASAGTLNYE 61
Query: 115 SVAEPIARIQPAISREPGSYFFLSHCAGIDTDNHVVHCETVTDELRTLEPWKFKISYDKL 174
V P+ ++ ++ F + ID D + +E + +D L
Sbjct: 62 DVLYPV----ESVLKKDKVNFVQAEVTKIDRD------------AKKVETNQGIYDFDIL 105
Query: 175 VIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEKSRLLHCV 234
V+ALG + TFGI G+K++A + V A+E+ R + S+E+ L +
Sbjct: 106 VVALGFVSETFGIEGMKDHAFQIENVITARELSRHIEDKFANY---AASKEKDDNDLSIL 162
Query: 235 VVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN-EILSSFDDRLRHYATTQ 293
V G G TGVEF GEL+D I ++ +Y ++ + +T +EA ++L F + L ++A +
Sbjct: 163 VGGAGFTGVEFLGELTDRI-PELCSKYGVDQNKVKITCVEAAPKMLPMFSEELVNHAVSY 221
Query: 294 LSKSGVRLV----------RGIVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKS 341
L GV +G V +VD +K LN GT VW+ GV S L++
Sbjct: 222 LEDRGVEFKIATPIVACNEKGFVVEVDGEKQQLNAGTS------VWAAGVRGSKLMEE 273
>sp|Q2FZV7|Y878_STAA8 NADH dehydrogenase-like protein SAOUHSC_00878 OS=Staphylococcus
aureus (strain NCTC 8325) GN=SAOUHSC_00878 PE=3 SV=1
Length = 402
Score = 93.2 bits (230), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 82/298 (27%), Positives = 138/298 (46%), Gaps = 41/298 (13%)
Query: 59 ANEKPRVVVLGSGWAG----CRLMKGIDTSLYDVVCVSPRNHMVFTPLLASTCVGTLEFR 114
A ++ +V+VLG+G+AG +L K I T ++ ++ + L GTL +
Sbjct: 2 AQDRKKVLVLGAGYAGLQTVTKLQKAISTEEAEITLINKNEYHYEATWLHEASAGTLNYE 61
Query: 115 SVAEPIARIQPAISREPGSYFFLSHCAGIDTDNHVVHCETVTDELRTLEPWKFKISYDKL 174
V P+ ++ ++ F + ID D + +E + +D L
Sbjct: 62 DVLYPV----ESVLKKDKVNFVQAEVTKIDRD------------AKKVETNQGIYDFDIL 105
Query: 175 VIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEKSRLLHCV 234
V+ALG + TFGI G+K++A + V A+E+ R + S+E+ L +
Sbjct: 106 VVALGFVSETFGIEGMKDHAFQIENVITARELSRHIEDKFANY---AASKEKDDNDLSIL 162
Query: 235 VVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN-EILSSFDDRLRHYATTQ 293
V G G TGVEF GEL+D I ++ +Y ++ + +T +EA ++L F + L ++A +
Sbjct: 163 VGGAGFTGVEFLGELTDRI-PELCSKYGVDQNKVKITCVEAAPKMLPMFSEELVNHAVSY 221
Query: 294 LSKSGVRLV----------RGIVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKS 341
L GV +G V +VD +K LN GT VW+ GV S L++
Sbjct: 222 LEDRGVEFKIATPIVACNEKGFVVEVDGEKQQLNAGTS------VWAAGVRGSKLMEE 273
>sp|Q2FID4|Y844_STAA3 NADH dehydrogenase-like protein SAUSA300_0844 OS=Staphylococcus
aureus (strain USA300) GN=SAUSA300_0844 PE=3 SV=1
Length = 402
Score = 93.2 bits (230), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 82/298 (27%), Positives = 138/298 (46%), Gaps = 41/298 (13%)
Query: 59 ANEKPRVVVLGSGWAG----CRLMKGIDTSLYDVVCVSPRNHMVFTPLLASTCVGTLEFR 114
A ++ +V+VLG+G+AG +L K I T ++ ++ + L GTL +
Sbjct: 2 AQDRKKVLVLGAGYAGLQTVTKLQKAISTEEAEITLINKNEYHYEATWLHEASAGTLNYE 61
Query: 115 SVAEPIARIQPAISREPGSYFFLSHCAGIDTDNHVVHCETVTDELRTLEPWKFKISYDKL 174
V P+ ++ ++ F + ID D + +E + +D L
Sbjct: 62 DVLYPV----ESVLKKDKVNFVQAEVTKIDRD------------AKKVETNQGIYDFDIL 105
Query: 175 VIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEKSRLLHCV 234
V+ALG + TFGI G+K++A + V A+E+ R + S+E+ L +
Sbjct: 106 VVALGFVSETFGIEGMKDHAFQIENVITARELSRHIEDKFANY---AASKEKDDNDLSIL 162
Query: 235 VVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN-EILSSFDDRLRHYATTQ 293
V G G TGVEF GEL+D I ++ +Y ++ + +T +EA ++L F + L ++A +
Sbjct: 163 VGGAGFTGVEFLGELTDRI-PELCSKYGVDQNKVKITCVEAAPKMLPMFSEELVNHAVSY 221
Query: 294 LSKSGVRLV----------RGIVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKS 341
L GV +G V +VD +K LN GT VW+ GV S L++
Sbjct: 222 LEDRGVEFKIATPIVACNEKGFVVEVDGEKQQLNAGTS------VWAAGVRGSKLMEE 273
>sp|Q7A6J4|Y802_STAAN NADH dehydrogenase-like protein SA0802 OS=Staphylococcus aureus
(strain N315) GN=SA0802 PE=1 SV=1
Length = 402
Score = 93.2 bits (230), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 82/298 (27%), Positives = 138/298 (46%), Gaps = 41/298 (13%)
Query: 59 ANEKPRVVVLGSGWAG----CRLMKGIDTSLYDVVCVSPRNHMVFTPLLASTCVGTLEFR 114
A ++ +V+VLG+G+AG +L K I T ++ ++ + L GTL +
Sbjct: 2 AQDRKKVLVLGAGYAGLQTVTKLQKAISTEEAEITLINKNEYHYEATWLHEASAGTLNYE 61
Query: 115 SVAEPIARIQPAISREPGSYFFLSHCAGIDTDNHVVHCETVTDELRTLEPWKFKISYDKL 174
V P+ ++ ++ F + ID D + +E + +D L
Sbjct: 62 DVLYPV----ESVLKKDKVNFVQAEVTKIDRD------------AKKVETNQGIYDFDIL 105
Query: 175 VIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEKSRLLHCV 234
V+ALG + TFGI G+K++A + V A+E+ R + S+E+ L +
Sbjct: 106 VVALGFVSETFGIEGMKDHAFQIENVITARELSRHIEDKFANY---AASKEKDDNDLSIL 162
Query: 235 VVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN-EILSSFDDRLRHYATTQ 293
V G G TGVEF GEL+D I ++ +Y ++ + +T +EA ++L F + L ++A +
Sbjct: 163 VGGAGFTGVEFLGELTDRI-PELCSKYGVDQNKVKITCVEAAPKMLPMFSEELVNHAVSY 221
Query: 294 LSKSGVRLV----------RGIVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKS 341
L GV +G V +VD +K LN GT VW+ GV S L++
Sbjct: 222 LEDRGVEFKIATPIVACNEKGFVVEVDGEKQQLNAGTS------VWAAGVRGSKLMEE 273
>sp|Q2YWP9|Y807_STAAB NADH dehydrogenase-like protein SAB0807 OS=Staphylococcus aureus
(strain bovine RF122 / ET3-1) GN=SAB0807 PE=3 SV=1
Length = 402
Score = 92.4 bits (228), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 82/298 (27%), Positives = 138/298 (46%), Gaps = 41/298 (13%)
Query: 59 ANEKPRVVVLGSGWAG----CRLMKGIDTSLYDVVCVSPRNHMVFTPLLASTCVGTLEFR 114
A ++ +V+VLG+G+AG +L K I T ++ ++ + L GTL +
Sbjct: 2 AQDRKKVLVLGAGYAGLQTVTKLQKTISTEEAEITLINKNEYHYEATWLHEASAGTLNYE 61
Query: 115 SVAEPIARIQPAISREPGSYFFLSHCAGIDTDNHVVHCETVTDELRTLEPWKFKISYDKL 174
V P+ ++ ++ F + ID D + +E + +D L
Sbjct: 62 DVLYPV----ESVLKKDKVNFVQAEVTKIDRD------------AKKVETNQGIYDFDIL 105
Query: 175 VIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEKSRLLHCV 234
V+ALG + TFGI G+K++A + V A+E+ R + S+E+ L +
Sbjct: 106 VVALGFVSETFGIEGMKDHAFQIENVITARELSRHIEDKFANY---AASKEKDDNDLSIL 162
Query: 235 VVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN-EILSSFDDRLRHYATTQ 293
V G G TGVEF GEL+D I ++ +Y ++ + +T +EA ++L F + L ++A +
Sbjct: 163 VGGAGFTGVEFLGELTDRI-PELCSKYGVDQNKVKITCVEAAPKMLPMFSEELVNHAVSY 221
Query: 294 LSKSGVRLV----------RGIVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKS 341
L GV +G V +VD +K LN GT VW+ GV S L++
Sbjct: 222 LEDRGVEFKIATPIVACNEKGFVVEVDGEKQQLNAGTS------VWAAGVRGSKLMEE 273
>sp|Q4L4V6|Y2010_STAHJ NADH dehydrogenase-like protein SH2010 OS=Staphylococcus
haemolyticus (strain JCSC1435) GN=SH2010 PE=3 SV=1
Length = 402
Score = 89.7 bits (221), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 78/298 (26%), Positives = 135/298 (45%), Gaps = 41/298 (13%)
Query: 59 ANEKPRVVVLGSGWAG----CRLMKGIDTSLYDVVCVSPRNHMVFTPLLASTCVGTLEFR 114
A ++ +V+VLG+G+AG +L K + D+ ++ + L GTL +
Sbjct: 2 AQDRKKVLVLGAGYAGLQTVTKLQKELSADEADITLINKNKYHYEATWLHEASAGTLNYE 61
Query: 115 SVAEPIARIQPAISREPGSYFFLSHCAGIDTDNHVVHCETVTDELRTLEPWKFKISYDKL 174
+ PI ++ +E F + ID + + +E YD L
Sbjct: 62 DLIYPI----ESVIKEDKVKFINAEVTKIDRN------------AKKVETNHGIYDYDIL 105
Query: 175 VIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEKSRLLHCV 234
V+ALG E+ TFGI+G+K+ A + + A+++ R + S+E+ + L +
Sbjct: 106 VVALGFESETFGINGMKDYAFQIENIETARKLSRHIEDKFANY---AASKEKDDKDLAIL 162
Query: 235 VVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN-EILSSFDDRLRHYATTQ 293
V G G TG+EF GEL++ I ++ +Y ++ + VT +EA ++L F D L +YA
Sbjct: 163 VGGAGFTGIEFLGELTERI-PELCNKYGVDQNKVRVTCVEAAPKMLPMFSDELVNYAVNY 221
Query: 294 LSKSGVRLV----------RGIVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKS 341
L GV +G V ++ Q+ L GT +W+ GV S L++
Sbjct: 222 LEDRGVEFKIATPIVACNEKGFVVKINDQEQQLEAGT------AIWAAGVRGSKLMEE 273
>sp|Q5HQM1|Y527_STAEQ NADH dehydrogenase-like protein SERP0527 OS=Staphylococcus
epidermidis (strain ATCC 35984 / RP62A) GN=SERP0527 PE=3
SV=1
Length = 402
Score = 81.3 bits (199), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 76/298 (25%), Positives = 138/298 (46%), Gaps = 41/298 (13%)
Query: 59 ANEKPRVVVLGSGWAG----CRLMKGIDTSLYDVVCVSPRNHMVFTPLLASTCVGTLEFR 114
A ++ +V+VLG+G+AG +L K + ++ ++ + + L GT+ +
Sbjct: 2 AQDRKKVLVLGAGYAGLQTVTKLQKELSADAAEITLINKNEYHYESTWLHEASAGTINYE 61
Query: 115 SVAEPIARIQPAISREPGSYFFLSHCAGIDTDNHVVHCETVTDELRTLEPWKFKISYDKL 174
+ P+ + ++++ + F ++ ID + + +E K +D L
Sbjct: 62 DLLYPV---EKTVNKDKVN-FVVAEVTKIDRN------------AKRVETDKGVYDFDIL 105
Query: 175 VIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEKSRLLHCV 234
V+ALG + TFGI G+KE+A + V ++++ R + S+E+ + L +
Sbjct: 106 VVALGFVSETFGIDGMKEHAFQIENVLTSRKLSRHIEDKFANY---AASKEKDDKDLSIL 162
Query: 235 VVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN-EILSSFDDRLRHYATTQ 293
V G G TG+EF GEL+D I ++ +Y + + +T +EA ++L F D L YA
Sbjct: 163 VGGAGFTGIEFLGELTDRI-PELCSKYGVDQSKVKLTCVEAAPKMLPMFSDDLVSYAVKY 221
Query: 294 LSKSGVRLV----------RGIVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKS 341
L GV +G V +V+ +K L GT VW+ GV S L++
Sbjct: 222 LEDRGVEFKIATPIVACNEKGFVVEVNGEKQQLEAGTS------VWTAGVRGSHLMEE 273
>sp|Q8CPV5|Y635_STAES NADH dehydrogenase-like protein SE_0635 OS=Staphylococcus
epidermidis (strain ATCC 12228) GN=SE_0635 PE=3 SV=1
Length = 402
Score = 80.9 bits (198), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 76/298 (25%), Positives = 137/298 (45%), Gaps = 41/298 (13%)
Query: 59 ANEKPRVVVLGSGWAG----CRLMKGIDTSLYDVVCVSPRNHMVFTPLLASTCVGTLEFR 114
A ++ +V+VLG+G+AG +L K + ++ ++ + + L GT+ +
Sbjct: 2 AQDRKKVLVLGAGYAGLQTVTKLQKELSADAAEITLINKNEYHYESTWLHEASAGTINYE 61
Query: 115 SVAEPIARIQPAISREPGSYFFLSHCAGIDTDNHVVHCETVTDELRTLEPWKFKISYDKL 174
+ P+ + +++ + F ++ ID + + +E K +D L
Sbjct: 62 DLLYPV---EKTVNKNKVN-FVVAEVTKIDRN------------AKRVETDKGVYDFDIL 105
Query: 175 VIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEKSRLLHCV 234
V+ALG + TFGI G+KE+A + V ++++ R + S+E+ + L +
Sbjct: 106 VVALGFVSETFGIDGMKEHAFQIENVLTSRKLSRHIEDKFANY---AASKEKDDKDLSIL 162
Query: 235 VVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN-EILSSFDDRLRHYATTQ 293
V G G TG+EF GEL+D I ++ +Y + + +T +EA ++L F D L YA
Sbjct: 163 VGGAGFTGIEFLGELTDRI-PELCSKYGVDQSKVKLTCVEAAPKMLPMFSDDLVSYAVKY 221
Query: 294 LSKSGVRLV----------RGIVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKS 341
L GV +G V +V+ +K L GT VW+ GV S L++
Sbjct: 222 LEDRGVEFKIATPIVACNEKGFVVEVNGEKQQLEAGTS------VWTAGVRGSHLMEE 273
>sp|Q49W80|Y1834_STAS1 NADH dehydrogenase-like protein SSP1834 OS=Staphylococcus
saprophyticus subsp. saprophyticus (strain ATCC 15305 /
DSM 20229) GN=SSP1834 PE=3 SV=1
Length = 402
Score = 79.0 bits (193), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 74/298 (24%), Positives = 132/298 (44%), Gaps = 41/298 (13%)
Query: 59 ANEKPRVVVLGSGWAG----CRLMKGIDTSLYDVVCVSPRNHMVFTPLLASTCVGTLEFR 114
A ++ +V+VLG+G+AG +L K I +V ++ ++ L GT+ +
Sbjct: 2 AQDRKKVLVLGAGYAGLQTITKLQKQISADEAEVTLINKNDYHYEATWLHEASAGTISYE 61
Query: 115 SVAEPIARIQPAISREPGSYFFLSHCAGIDTDNHVVHCETVTDELRTLEPWKFKISYDKL 174
+ P+ ++ + F + ID + V + +D L
Sbjct: 62 DLLYPV----ESVVNKDKVNFVKAEVTKIDRNAKKVETDAGI------------FDFDIL 105
Query: 175 VIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEKSRLLHCV 234
V++LG E+ TFGI G+K+ A + V A+++ R + S+++ + L +
Sbjct: 106 VVSLGFESETFGIKGMKDYAFQIENVLTARKLSRHIEDKFANY---ASSKQKDDKDLAII 162
Query: 235 VVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN-EILSSFDDRLRHYATTQ 293
V G G TGVEF GEL+D I ++ +Y + + +T +EA ++L F D L ++A
Sbjct: 163 VGGAGFTGVEFLGELTDRI-PELCNKYGVEQSKVKITCVEAAPKMLPMFSDELVNHAVNY 221
Query: 294 LSKSGVRLV----------RGIVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKS 341
L GV +G V V+ ++ L T +VW+ GV S L++
Sbjct: 222 LENKGVEFKIGTPIVAANEKGFVVKVNDEEQQLEANT------VVWAAGVRGSKLMEE 273
>sp|P44856|DHNA_HAEIN NADH dehydrogenase OS=Haemophilus influenzae (strain ATCC 51907 /
DSM 11121 / KW20 / Rd) GN=ndh PE=3 SV=1
Length = 444
Score = 76.6 bits (187), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 61/191 (31%), Positives = 96/191 (50%), Gaps = 17/191 (8%)
Query: 168 KISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLL-LNLMLSD---VPGIS 223
+I YD LVIA+G++++ F GV +N FL A + KLL L L S+ + I
Sbjct: 108 RIPYDYLVIAIGSKSNDFNTKGVADNCIFLDSSKQALRFQHKLLELFLKFSENRALDDIG 167
Query: 224 EEE-KSRL-----LHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVK---DYIHVTLIE 274
EEE K +L ++ +VGGG TGVE + EL + + Y + K + VTL+E
Sbjct: 168 EEEFKQKLVDENKVNIAIVGGGATGVELTAEL--YHAAEDLSSYGYGKIDSSCLQVTLVE 225
Query: 275 A-NEILSSFDDRLRHYATTQLSKSGVRL-VRGIVKDVDSQKLILNDGTEVPYGLLVWSTG 332
A +L + + L +L + G + + ++ + LI DG E+ L+VW+ G
Sbjct: 226 AGTRLLPALPENLSAAVLDELKEMGTNVQLNTMITEAQPNTLITKDGGEIKADLIVWAAG 285
Query: 333 VGPSTLVKSLD 343
V ST+ + D
Sbjct: 286 VRASTVTQQFD 296
>sp|O05267|YUMB_BACSU NADH dehydrogenase-like protein YumB OS=Bacillus subtilis (strain
168) GN=yumB PE=3 SV=1
Length = 406
Score = 73.2 bits (178), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 75/285 (26%), Positives = 125/285 (43%), Gaps = 30/285 (10%)
Query: 59 ANEKPRVVVLGSGWAG----CRLMKGIDTSLYDVVCVSPRNHMVFTPLLASTCVGTLEFR 114
A KP++V+LG+G+ G RL K + + D+ V+ N+ T + GTL
Sbjct: 2 ALNKPKIVILGAGYGGLMTVTRLTKYVGPNDADITLVNKHNYHYETTWMHEASAGTLHHD 61
Query: 115 SVAEPIARIQPAISREPGSYFFLSHCAGIDTDNHVVHCETVTDELRTLEPWKFKISYDKL 174
+I+ I++ + F I D V ++ YD L
Sbjct: 62 RCR---YQIKDVINQSRVN-FVQDTVKAIKIDEKKVVLAN------------GELQYDYL 105
Query: 175 VIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEKSRLLHCV 234
VI LGA TFGI G+KE A + ++ ++ +R + L + E++ L V
Sbjct: 106 VIGLGAVPETFGIKGLKEYAFPIANINTSRLLREHIELQFATYNT---EAEKRPDRLTIV 162
Query: 235 VVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN-EILSSFDDRLRHYATTQ 293
V G G TG+EF GEL+ + ++ + Y + + + +EA +L FD L YA
Sbjct: 163 VGGAGFTGIEFLGELAARV-PELCKEYDVDRSLVRIICVEAAPTVLPGFDPELVDYAVHY 221
Query: 294 LSKSGVRLVRGI-VKDVDSQKLILNDGTEVPYGL----LVWSTGV 333
L ++GV G V++ + + + E P + +VW+ GV
Sbjct: 222 LEENGVEFKIGTAVQECTPEGVRVGKKDEEPEQIKSQTVVWAAGV 266
>sp|P80861|YJLD_BACSU NADH dehydrogenase-like protein YjlD OS=Bacillus subtilis (strain
168) GN=yjlD PE=1 SV=3
Length = 392
Score = 64.7 bits (156), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 77/284 (27%), Positives = 128/284 (45%), Gaps = 33/284 (11%)
Query: 65 VVVLGSGWAGC------RLMKGIDTSLYDVVCVSPRNHMVFTPLLASTCVGTLEFRSVAE 118
+V+LG+G+ G R + + VV P H + T L G + ++VA
Sbjct: 5 IVILGAGYGGVLSALTVRKHYTKEQARVTVVNKYP-THQIITEL-HRLAAGNVSEKAVAM 62
Query: 119 PIARIQPAISREPGSYFFLSHCAGIDTDNHVVHCETVT-DELRTLEPWKFKISYDKLVIA 177
P+ ++ G D D + + + D+ ++YD LV+
Sbjct: 63 PLEKL----------------FKGKDIDLKIAEVSSFSVDKKEVALADGSTLTYDALVVG 106
Query: 178 LGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEKSRLLHCVVVG 237
LG+ + FGI G++EN+ L+ A ++ + + V S+ + ++ G
Sbjct: 107 LGSVTAYFGIPGLEENSMVLKSAADANKVFQH-----VEDRVREYSKTKNEADATILIGG 161
Query: 238 GGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN-EILSSFDDRLRHYATTQLSK 296
GG TGVE GEL+D IM ++ ++Y I + L+EA +IL D L AT L K
Sbjct: 162 GGLTGVELVGELAD-IMPNLAKKYGVDHKEIKLKLVEAGPKILPVLPDDLIERATASLEK 220
Query: 297 SGVRLVRGI-VKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLV 339
GV + G+ V +V+ + L DG++V VW+ GV + LV
Sbjct: 221 RGVEFLTGLPVTNVEGNVIDLKDGSKVVANTFVWTGGVQGNPLV 264
>sp|O32117|YUTJ_BACSU NADH dehydrogenase-like protein YutJ OS=Bacillus subtilis (strain
168) GN=yutJ PE=3 SV=2
Length = 355
Score = 64.3 bits (155), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/185 (26%), Positives = 83/185 (44%), Gaps = 29/185 (15%)
Query: 169 ISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEKS 228
ISYD +I LG E + G E ++ + ++E +KL S
Sbjct: 94 ISYDDAIIGLGCEDKYHNVPGAPEFTYSIQTIDQSRETYQKL--------------NNLS 139
Query: 229 RLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIE-ANEILSSFDDRLR 287
+VG G +GVE + EL + +D +++ L + N ILSSF +RL
Sbjct: 140 ANATVAIVGAGLSGVELASELRE------------SRDDLNIILFDRGNLILSSFPERLS 187
Query: 288 HYATTQLSKSGVRLV-RGIVKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKSLDLPK 346
Y + GVR++ R + V+ + ++ N + +VW+ G+ P+ +V+ LD+ K
Sbjct: 188 KYVQKWFEEHGVRIINRANITKVE-EGVVYNHDDPISADAIVWTAGIQPNKVVRDLDVEK 246
Query: 347 SPGGR 351
GR
Sbjct: 247 DAQGR 251
>sp|Q8GXR9|DHNA_ARATH NADH dehydrogenase C1, chloroplastic/mitochondrial OS=Arabidopsis
thaliana GN=NDC1 PE=1 SV=2
Length = 519
Score = 47.8 bits (112), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 67/259 (25%), Positives = 104/259 (40%), Gaps = 41/259 (15%)
Query: 60 NEKPRVVVLGSGWAGCRLMKGIDTSLY------DVVCVSPRNHMVFTPLLASTCVGTLEF 113
N++PRV +LG G+ G +++ ++ VV V VF P+L G ++
Sbjct: 78 NKRPRVCILGGGFGGLYTALRLESLVWPEDKKPQVVLVDQSERFVFKPMLYELLSGEVDV 137
Query: 114 RSVAEPIARIQPAISREPGSYFFLSHCAGIDTDNH--VVHCE-TVTDELRTLEPWKFKIS 170
+A + + G F + +H V E +VT LE FKI
Sbjct: 138 WEIAPRFSDLLT----NTGIQFLRDRVKTLLPCDHLGVNGSEISVTGGTVLLES-GFKIE 192
Query: 171 YDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEKSRL 230
YD LV+ALGAE+ + G E A + A + KL S+ E+
Sbjct: 193 YDWLVLALGAESKLDVVPGAMELAFPFYTLEDAIRVNEKL------------SKLERKNF 240
Query: 231 -----LHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEILSSFDDR 285
+ VVG G GVE + +S+ R + + I+V+ IL+S D
Sbjct: 241 KDGSAIKVAVVGCGYAGVELAATISE------RLQDRGIVQSINVS----KNILTSAPDG 290
Query: 286 LRHYATTQLSKSGVRLVRG 304
R A L+ V+L+ G
Sbjct: 291 NREAAMKVLTSRKVQLLLG 309
>sp|Q9LK94|MDAR2_ARATH Probable monodehydroascorbate reductase, cytoplasmic isoform 2
OS=Arabidopsis thaliana GN=At3g27820 PE=2 SV=1
Length = 488
Score = 47.4 bits (111), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 84/195 (43%), Gaps = 42/195 (21%)
Query: 169 ISYDKLVIALGAEA---STFGIHGVK-ENATFLREVHHAQEIRRKLLLNLMLSDVPGISE 224
ISY L+IA GA A FG+ G EN +LR++ A L ++ S G
Sbjct: 112 ISYKFLIIATGARALKLEEFGVEGSDAENVCYLRDLADANR-----LATVIQSSSNG--- 163
Query: 225 EEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLI--EANEILSSF 282
+ VV+GGG G+E + L V + I+VT++ EA+ + F
Sbjct: 164 -------NAVVIGGGYIGMECAASL--------------VINKINVTMVFPEAHCMARLF 202
Query: 283 DDRLRHYATTQLSKSGVRLVRGIVK---DVDSQKLI----LNDGTEVPYGLLVWSTGVGP 335
++ GV+ ++G V + DS K + L DG+ +P L+V G+ P
Sbjct: 203 TPKIASLYEDYYRAKGVKFIKGTVLTSFEFDSNKKVTAVNLKDGSHLPADLVVVGIGIRP 262
Query: 336 STLVKSLDLPKSPGG 350
+T + L GG
Sbjct: 263 NTSLFEGQLTIEKGG 277
>sp|P16640|CAMA_PSEPU Putidaredoxin reductase OS=Pseudomonas putida GN=camA PE=1 SV=1
Length = 422
Score = 43.1 bits (100), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 70/299 (23%), Positives = 121/299 (40%), Gaps = 61/299 (20%)
Query: 60 NEKPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRNHMVFTPLLASTCVGTLEFRSVAEP 119
N VV++G+G AG + G+ S ++ + V L L ++ AE
Sbjct: 2 NANDNVVIVGTGLAGVEVAFGLRASGWEGNIRLVGDATVIPHHLPPLSKAYLAGKATAES 61
Query: 120 I-ARIQPAISREPGSYFFLSHCAGIDTDNHVVHCETVTDELRTLEPWKFKISYDKLVIAL 178
+ R A + + + I+ D + + + R L+ YD+LV+A
Sbjct: 62 LYLRTPDAYAAQNIQLLGGTQVTAINRDRQ----QVILSDGRALD-------YDRLVLAT 110
Query: 179 GAEASTF----GIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEKSRLLHCV 234
G G G N +LR + A+ IRR+L+ + +RL V
Sbjct: 111 GGRPRPLPVASGAVGKANNFRYLRTLEDAECIRRQLIAD--------------NRL---V 153
Query: 235 VVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIE-ANEIL--------SSFDDR 285
V+GGG G+E + + +K +HVTL++ A +L S+F +
Sbjct: 154 VIGGGYIGLEVAA--------------TAIKANMHVTLLDTAARVLERVTAPPVSAFYEH 199
Query: 286 LRHYATTQLSKSGVRLVRGIVKDVDSQK---LILNDGTEVPYGLLVWSTGVGPSTLVKS 341
L A + ++G + V G D QK ++ DGT +P L++ G+ P+ + S
Sbjct: 200 LHREAGVDI-RTGTQ-VCGFEMSTDQQKVTAVLCEDGTRLPADLVIAGIGLIPNCELAS 256
>sp|Q9GRX6|AIFM1_DICDI Apoptosis-inducing factor 1, mitochondrial OS=Dictyostelium
discoideum GN=aif PE=2 SV=1
Length = 532
Score = 42.7 bits (99), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 49/189 (25%), Positives = 82/189 (43%), Gaps = 33/189 (17%)
Query: 169 ISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEKS 228
I YDK +IA G E R++ +K+ + D + E K
Sbjct: 206 IRYDKCLIATGGEP---------------RQLKFTSTNDKKISTYRTVEDFRKLYEVVKD 250
Query: 229 RLLHCVVVGGGPTGVEFSGEL-SDFIMRDVRQRYSHVKDYIHVTLIEANEILSSFDDRLR 287
H V+GGG G E + + S+F ++++ I E+ + + F D L
Sbjct: 251 GGKHVTVLGGGFLGSELTCAINSNFQDKNIK---------IDQIFPESGVLSTLFPDYLS 301
Query: 288 HYATTQLSKSGVR-----LVRGIVKDVDSQKL--ILNDGTEVPYGLLVWSTGVGPST-LV 339
YAT ++ KSGV L++ +V + ++ +L LN+G +V + G+ P+T +V
Sbjct: 302 KYATEEIIKSGVNVHTGTLIKDVVDNSENGRLTVTLNNGKTFETDHVVVAAGIIPNTNVV 361
Query: 340 KSLDLPKSP 348
KS L P
Sbjct: 362 KSTTLEIDP 370
>sp|P39050|TYTR_LEIDO Trypanothione reductase OS=Leishmania donovani GN=TPR PE=3 SV=1
Length = 491
Score = 40.0 bits (92), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 38/126 (30%), Positives = 55/126 (43%), Gaps = 20/126 (15%)
Query: 224 EEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEILSSFD 283
E+ R+L VGGG VEF+G + Y Y+ + + IL FD
Sbjct: 185 EDAPKRML---CVGGGYIAVEFAG---------IFNGYKPCGGYVDLCY-RGDLILRGFD 231
Query: 284 DRLRHYATTQLSKSGVRLVRG-----IVKDVD-SQKLILNDGTEVPYGLLVWSTGVGPST 337
+R T QL +G+R+ I K+ D S + NDGTE Y ++ + GV P +
Sbjct: 232 TEVRKSLTKQLGANGIRVRTNLNPTKITKNEDGSNHVHFNDGTEEDYDQVMLAIGV-PRS 290
Query: 338 LVKSLD 343
LD
Sbjct: 291 QALQLD 296
>sp|P48640|GSHRP_SOYBN Glutathione reductase, chloroplastic OS=Glycine max GN=GR PE=2 SV=1
Length = 544
Score = 40.0 bits (92), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 30/116 (25%), Positives = 54/116 (46%), Gaps = 19/116 (16%)
Query: 228 SRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEILSSFDDRLR 287
++ + +VGGG +EF+G ++ +K +HV I ++L FD+ +R
Sbjct: 236 TKPVKIAIVGGGYIALEFAG------------IFNGLKSEVHV-FIRQKKVLRGFDEEIR 282
Query: 288 HYATTQLSKSGVRL-----VRGIVKDVD-SQKLILNDGTEVPYGLLVWSTGVGPST 337
+ Q+S G+ + I K D S L N GT + ++++TG P+T
Sbjct: 283 DFVEEQMSVRGIEFHTEESPQAITKSADGSFSLKTNKGTVDGFSHIMFATGRRPNT 338
>sp|P27456|GSHRP_PEA Glutathione reductase, chloroplastic/mitochondrial OS=Pisum sativum
GN=GR PE=2 SV=1
Length = 552
Score = 40.0 bits (92), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 30/116 (25%), Positives = 52/116 (44%), Gaps = 19/116 (16%)
Query: 228 SRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEILSSFDDRLR 287
S+ +VGGG +EF+G ++ +K +HV I ++L FD+ +R
Sbjct: 244 SKPQKIAIVGGGYIALEFAG------------IFNGLKSEVHV-FIRQKKVLRGFDEEIR 290
Query: 288 HYATTQLSKSGVRLVR-----GIVKDVD-SQKLILNDGTEVPYGLLVWSTGVGPST 337
+ ++ G+ I K D S L N GTE + ++++TG P+T
Sbjct: 291 DFVAENMALRGIEFHTEESPVAITKAADGSLSLKTNKGTEEGFSHIMFATGRSPNT 346
>sp|A9BF22|SYL_PETMO Leucine--tRNA ligase OS=Petrotoga mobilis (strain DSM 10674 / SJ95)
GN=leuS PE=3 SV=1
Length = 828
Score = 38.9 bits (89), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 19/71 (26%), Positives = 36/71 (50%)
Query: 197 LREVHHAQEIRRKLLLNLMLSDVPGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRD 256
+ + ++ QEI RK N D +S EE + + +V+ P+G G + ++++ D
Sbjct: 1 MEKTYNPQEIERKWQRNWQEKDAFKVSNEEYHKKYYDLVMFPYPSGTLHVGHVKNYVIGD 60
Query: 257 VRQRYSHVKDY 267
V RY ++ Y
Sbjct: 61 VIARYKRMRGY 71
>sp|P80461|GSHRP_TOBAC Glutathione reductase, chloroplastic (Fragment) OS=Nicotiana
tabacum GN=GOR PE=1 SV=1
Length = 557
Score = 38.5 bits (88), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 52/110 (47%), Gaps = 19/110 (17%)
Query: 234 VVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEILSSFDDRLRHYATTQ 293
+VGGG +EF+G ++ +K +HV I ++L FD+ +R + Q
Sbjct: 256 AIVGGGYIALEFAG------------IFNGLKSEVHV-FIRQKKVLRGFDEEIRDFVGEQ 302
Query: 294 LSKSGVRL-----VRGIVKDVD-SQKLILNDGTEVPYGLLVWSTGVGPST 337
+S G+ + IVK D S L + GT + ++++TG P+T
Sbjct: 303 MSLRGIEFHTEESPQAIVKSADGSLSLKTSRGTVEGFSHIMFATGRRPNT 352
>sp|A8ANR8|NORW_CITK8 Nitric oxide reductase FlRd-NAD(+) reductase OS=Citrobacter koseri
(strain ATCC BAA-895 / CDC 4225-83 / SGSC4696) GN=norW
PE=3 SV=1
Length = 377
Score = 37.4 bits (85), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 70/295 (23%), Positives = 115/295 (38%), Gaps = 80/295 (27%)
Query: 65 VVVLGSGWAGCRLMKGIDTSLYDVVCVSPRNHMVFTPLLASTCVGTLEFRSVAEPIARIQ 124
+V++GSG+A +L+K I ++ V L+A+ + ++ I++ Q
Sbjct: 5 IVIIGSGFAARQLVKNI----------RKQDATVALTLIAADSMDEYNKPDLSHVISQAQ 54
Query: 125 PA--ISREPGSYF-------FLSHC--AGIDTDNHVVHCETVTDELRTLEPWKFKISYDK 173
A ++R+ F H ID D HVV + + W+F DK
Sbjct: 55 RADDLTRQSAGEFAEQFNLRLFPHTWITDIDADAHVVKSQD--------KQWQF----DK 102
Query: 174 LVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEKSRLLHC 233
LV+A GA A + G R+L+L L E +
Sbjct: 103 LVLATGASAFVPPVAG------------------RELMLTLNSQQEYRACETQLRDAQRV 144
Query: 234 VVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIE-ANEILSSF-----DDRLR 287
++VGGG G E + DF + VTLI+ A IL+S RL+
Sbjct: 145 LIVGGGLIGSELA---MDF-----------CRAGKAVTLIDNAASILASLMPPEVSSRLQ 190
Query: 288 HYATTQLSKSGVRL-----VRGIVKDVDSQKLILNDGTEVPYGLLVWSTGVGPST 337
H +L+ GV L ++G+ K + L+ +V ++ +TG+ P T
Sbjct: 191 H----RLTDMGVHLLLKSQLQGLEKTATGIRATLDRDRQVEVDAVIAATGLRPET 241
>sp|P42433|NASB_BACSU Assimilatory nitrate reductase electron transfer subunit
OS=Bacillus subtilis (strain 168) GN=nasB PE=2 SV=2
Length = 771
Score = 37.0 bits (84), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 59/286 (20%), Positives = 106/286 (37%), Gaps = 53/286 (18%)
Query: 61 EKPRVVVLGSGWAGCRLMKGI---DTSLYDVVCVSPRNHMVFTPLLASTCVGTLEFRSVA 117
+K R+V+ G+G AG R ++ + + ++++V H + +L S+ L+ +
Sbjct: 2 KKQRLVLAGNGMAGIRCIEEVLKLNRHMFEIVIFGSEPHPNYNRILLSS---VLQGEASL 58
Query: 118 EPIARIQPAISREPGSYFFLSHCA-GIDTDNHVVHCETVTDELRTLEPWKFKISYDKLVI 176
+ I + G + IDTD V +TD RTL SYDKL++
Sbjct: 59 DDITLNSKDWYDKHGITLYTGETVIQIDTDQQQV----ITDRKRTL-------SYDKLIV 107
Query: 177 ALGAEASTFGIHGVKENATF-LREVHHAQEIRRKLLLNLMLSDVPGISEEEKSRLLHCVV 235
A G+ I G + + R + Q L+N+ V
Sbjct: 108 ATGSSPHILPIPGADKKGVYGFRTIEDCQA-----LMNM------------AQHFQKAAV 150
Query: 236 VGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEILSSFDDRLRHYATTQLS 295
+G G G+E + L H+ + V A + D T+L
Sbjct: 151 IGAGLLGLEAAVGL------------QHLGMDVSVIHHSAGIMQKQLDQTAARLLQTELE 198
Query: 296 KSGVRLVR-----GIVKDVDSQKLILNDGTEVPYGLLVWSTGVGPS 336
+ G+ + I + ++ DG+ + L+V + GV P+
Sbjct: 199 QKGLTFLLEKDTVSISGATKADRIHFKDGSSLKADLIVMAAGVKPN 244
>sp|P48642|GSHRC_ORYSJ Glutathione reductase, cytosolic OS=Oryza sativa subsp. japonica
GN=GRC2 PE=2 SV=2
Length = 496
Score = 36.2 bits (82), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 30/112 (26%), Positives = 51/112 (45%), Gaps = 20/112 (17%)
Query: 232 HCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEI-LSSFDDRLRHYA 290
V++GGG VEF+ I + + HV L E+ L FDD +R
Sbjct: 202 RAVILGGGYIAVEFAS-----IWKGMGA---------HVDLFYRKELPLRGFDDEMRTVV 247
Query: 291 TTQLSKSGVRLVRG-----IVKDVDSQKLILNDGTEVPYGLLVWSTGVGPST 337
+ L G+RL G + K D K++ + G E+ +++++TG P++
Sbjct: 248 ASNLEGRGIRLHPGTNLSELSKTADGIKVVTDKGEEIIADVVLFATGRTPNS 299
>sp|Q9VQ79|AIFM1_DROME Putative apoptosis-inducing factor 1, mitochondrial OS=Drosophila
melanogaster GN=AIF PE=2 SV=2
Length = 739
Score = 36.2 bits (82), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 30/56 (53%), Gaps = 3/56 (5%)
Query: 295 SKSGVRLVRGI-VKDVDSQKLI--LNDGTEVPYGLLVWSTGVGPSTLVKSLDLPKS 347
+ G+ + +G VK VD+QK I LNDG E+ Y + +TG P L D P S
Sbjct: 346 ANGGIAVAQGFSVKKVDAQKRIVTLNDGYEISYDECLIATGCAPKNLPMLRDAPPS 401
>sp|P52923|AIF1_YEAST Apoptosis-inducing factor 1 OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=AIF1 PE=1 SV=1
Length = 378
Score = 36.2 bits (82), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 34/130 (26%), Positives = 60/130 (46%), Gaps = 16/130 (12%)
Query: 224 EEEKSRLL---HCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEILS 280
E E SR+ H + +GGG E +GEL + ++R + IH ++++L
Sbjct: 128 EREASRISDADHILFLGGGFVNCELAGELLFKYLEEIRSGKKRIS-IIH----NSDKLLP 182
Query: 281 S---FDDRLRHYATTQLSKSGVRLVRGIVK---DVDSQKLILNDGTE--VPYGLLVWSTG 332
++D LR T LSK+G+ L V D +++ L +G+ + L+ G
Sbjct: 183 DSGLYNDTLRKNVTDYLSKNGITLYLNTVGASLDTSPKRIFLGEGSSKYIDADLIYRGVG 242
Query: 333 VGPSTLVKSL 342
+ P+ V S+
Sbjct: 243 ISPNVPVNSI 252
>sp|P48639|GSHR_BURCE Glutathione reductase OS=Burkholderia cepacia GN=gor PE=3 SV=1
Length = 449
Score = 34.3 bits (77), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 50/108 (46%), Gaps = 18/108 (16%)
Query: 235 VVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEILSSFDDRLRHYATTQL 294
++GGG EF+G + HV V L +++L FDD LR + +L
Sbjct: 172 IIGGGYIACEFAGIFNGL--------GRHV-----VQLHRGSQVLRGFDDELREHLGDEL 218
Query: 295 SKSGVRLVRGI-VKDVDSQK----LILNDGTEVPYGLLVWSTGVGPST 337
KSG+ L G+ V V+ Q+ + L G + ++ +TG P+T
Sbjct: 219 KKSGIDLRLGVDVVAVERQRGALSVQLTTGDAMEVDAVMAATGRLPNT 266
>sp|Q8T137|GSHR_DICDI Glutathione reductase OS=Dictyostelium discoideum GN=gsr PE=3 SV=2
Length = 465
Score = 34.3 bits (77), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 29/112 (25%), Positives = 50/112 (44%), Gaps = 21/112 (18%)
Query: 234 VVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEILSSFDDRLRHYATTQ 293
+VVG G VE +G L H +I + L +FD+ L Q
Sbjct: 183 LVVGAGYIAVELAGVL-------------HSLGSETTMVIRQKQFLRTFDEMLHTTLLKQ 229
Query: 294 LSKSGVRLV-----RGIVKDVDSQKLIL--NDGTEV-PYGLLVWSTGVGPST 337
++ GV+ V + + +DVD +++I N G ++ P ++W+ G P+T
Sbjct: 230 MTDDGVKFVTEASIKSLERDVDGKRIIATTNAGVKLPPVECVIWAIGRVPNT 281
>sp|Q7N4V5|HCAD_PHOLL 3-phenylpropionate/cinnamic acid dioxygenase ferredoxin--NAD(+)
reductase component OS=Photorhabdus luminescens subsp.
laumondii (strain TT01) GN=hcaD PE=3 SV=1
Length = 394
Score = 34.3 bits (77), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 40/81 (49%), Gaps = 18/81 (22%)
Query: 168 KISYDKLVIALGAEASTFG-IHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEE 226
K+ YDKL++ +GA A F + + EN LR + AQ +R+ + ++
Sbjct: 98 KLRYDKLLLTMGARARRFPLLDQLGENIYTLRTLDDAQRLRQAV--------------KK 143
Query: 227 KSRLLHCVVVGGGPTGVEFSG 247
R+L +VGGG G+E +
Sbjct: 144 DKRIL---IVGGGVIGLELAA 161
>sp|P28593|TYTR_TRYCR Trypanothione reductase OS=Trypanosoma cruzi GN=TPR PE=1 SV=1
Length = 492
Score = 34.3 bits (77), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 33/121 (27%), Positives = 56/121 (46%), Gaps = 20/121 (16%)
Query: 234 VVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANE-ILSSFDDRLRHYATT 292
+ VGGG VEF+G + + +D + VTL E IL FD LR T
Sbjct: 193 LTVGGGFISVEFAGIFNAYKPKDGQ-----------VTLCYRGEMILRGFDHTLREELTK 241
Query: 293 QLSKSGVRLV-----RGIVKDVD-SQKLILNDGTEVPYGLLVWSTGVGPSTLVKSLDLPK 346
QL+ +G++++ + + D S+ + G ++ + L++ + G P T K L L
Sbjct: 242 QLTANGIQILTKENPAKVELNADGSKSVTFESGKKMDFDLVMMAIGRSPRT--KDLQLQN 299
Query: 347 S 347
+
Sbjct: 300 A 300
>sp|Q9Y6N5|SQRD_HUMAN Sulfide:quinone oxidoreductase, mitochondrial OS=Homo sapiens
GN=SQRDL PE=1 SV=1
Length = 450
Score = 33.5 bits (75), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 26/106 (24%), Positives = 42/106 (39%), Gaps = 16/106 (15%)
Query: 87 DVVCVSPRNHMVFTPLLASTCVGTLEFRSVAEPIARIQPAISREPGSYFFLSHCAGIDTD 146
+V V P + P+ G + S P A + P+ G + + ++ D
Sbjct: 70 NVAIVEPSERHFYQPIWTLVGAGAKQLSSSGRPTASVIPS-----GVEWIKARVTELNPD 124
Query: 147 NHVVHCETVTDELRTLEPWKFKISYDKLVIALGAEASTFGIHGVKE 192
+ +H + DE KISY L+IALG + I G+ E
Sbjct: 125 KNCIHTDD--DE---------KISYRYLIIALGIQLDYEKIKGLPE 159
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.319 0.136 0.403
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 131,793,619
Number of Sequences: 539616
Number of extensions: 5527632
Number of successful extensions: 15045
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 33
Number of HSP's successfully gapped in prelim test: 48
Number of HSP's that attempted gapping in prelim test: 14911
Number of HSP's gapped (non-prelim): 103
length of query: 351
length of database: 191,569,459
effective HSP length: 118
effective length of query: 233
effective length of database: 127,894,771
effective search space: 29799481643
effective search space used: 29799481643
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 62 (28.5 bits)