Query 018704
Match_columns 351
No_of_seqs 201 out of 2426
Neff 9.6
Searched_HMMs 29240
Date Mon Mar 25 04:47:00 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/018704.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/018704hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4g6h_A Rotenone-insensitive NA 100.0 7.6E-39 2.6E-43 308.0 23.9 289 60-350 40-351 (502)
2 4eqs_A Coenzyme A disulfide re 100.0 5.7E-34 1.9E-38 270.2 26.5 250 63-351 1-257 (437)
3 1xhc_A NADH oxidase /nitrite r 100.0 2E-33 6.7E-38 260.7 21.7 235 62-347 8-247 (367)
4 3ef6_A Toluene 1,2-dioxygenase 100.0 3.5E-33 1.2E-37 263.0 23.1 238 63-347 3-254 (410)
5 3klj_A NAD(FAD)-dependent dehy 100.0 1.1E-33 3.7E-38 263.8 18.0 231 61-347 8-244 (385)
6 3lxd_A FAD-dependent pyridine 100.0 2.2E-32 7.4E-37 258.0 25.1 241 61-347 8-264 (415)
7 3fg2_P Putative rubredoxin red 100.0 3E-32 1E-36 256.2 24.9 239 63-347 2-254 (404)
8 3ics_A Coenzyme A-disulfide re 100.0 8E-32 2.7E-36 265.0 27.0 254 60-350 34-298 (588)
9 2gqw_A Ferredoxin reductase; f 100.0 2.9E-32 9.9E-37 256.4 22.8 237 61-347 6-252 (408)
10 3iwa_A FAD-dependent pyridine 100.0 4.3E-32 1.5E-36 260.1 22.4 254 62-350 3-274 (472)
11 3ntd_A FAD-dependent pyridine 100.0 1.1E-31 3.9E-36 262.8 25.3 251 63-350 2-283 (565)
12 3cgb_A Pyridine nucleotide-dis 100.0 1.1E-30 3.8E-35 250.7 26.6 252 62-350 36-298 (480)
13 3kd9_A Coenzyme A disulfide re 100.0 2.6E-31 8.8E-36 253.1 21.2 246 62-350 3-260 (449)
14 2bc0_A NADH oxidase; flavoprot 100.0 9.9E-31 3.4E-35 251.6 25.1 247 61-350 34-306 (490)
15 2cdu_A NADPH oxidase; flavoenz 100.0 2.2E-30 7.7E-35 246.9 26.8 246 63-350 1-262 (452)
16 1q1r_A Putidaredoxin reductase 100.0 5.8E-31 2E-35 249.2 22.5 241 61-347 3-263 (431)
17 3oc4_A Oxidoreductase, pyridin 100.0 5.7E-31 1.9E-35 251.0 22.1 243 63-350 3-259 (452)
18 1nhp_A NADH peroxidase; oxidor 100.0 5.1E-30 1.7E-34 244.0 26.3 247 63-350 1-261 (447)
19 2v3a_A Rubredoxin reductase; a 100.0 1.5E-30 5.3E-35 242.9 22.1 239 62-347 4-256 (384)
20 3h8l_A NADH oxidase; membrane 100.0 1.9E-30 6.4E-35 244.3 21.8 247 63-342 2-277 (409)
21 3hyw_A Sulfide-quinone reducta 100.0 5.4E-30 1.9E-34 242.6 22.7 248 63-346 3-267 (430)
22 1m6i_A Programmed cell death p 100.0 1.5E-29 5.1E-34 243.4 20.6 250 61-348 10-296 (493)
23 3fbs_A Oxidoreductase; structu 100.0 3.7E-30 1.3E-34 231.3 14.8 231 62-347 2-239 (297)
24 2wpf_A Trypanothione reductase 100.0 1.9E-29 6.6E-34 242.7 20.3 240 62-350 7-310 (495)
25 3f8d_A Thioredoxin reductase ( 100.0 1.4E-29 4.8E-34 230.1 17.6 239 61-350 14-267 (323)
26 3sx6_A Sulfide-quinone reducta 100.0 3.8E-29 1.3E-33 237.4 21.1 252 62-350 4-284 (437)
27 1fec_A Trypanothione reductase 100.0 9.6E-29 3.3E-33 237.7 20.7 243 62-350 3-306 (490)
28 3itj_A Thioredoxin reductase 1 100.0 1.3E-29 4.5E-34 231.9 14.0 247 59-350 19-286 (338)
29 2hqm_A GR, grase, glutathione 100.0 1.5E-28 5.1E-33 235.8 21.2 241 62-350 11-302 (479)
30 3qfa_A Thioredoxin reductase 1 100.0 5.2E-29 1.8E-33 241.1 17.8 245 60-350 30-334 (519)
31 3l8k_A Dihydrolipoyl dehydroge 100.0 3.7E-29 1.3E-33 239.3 16.4 243 62-350 4-289 (466)
32 1mo9_A ORF3; nucleotide bindin 100.0 2.7E-29 9.1E-34 243.4 15.2 242 60-350 41-333 (523)
33 4b1b_A TRXR, thioredoxin reduc 100.0 4.8E-29 1.6E-33 240.8 16.9 245 62-350 42-337 (542)
34 1ges_A Glutathione reductase; 100.0 1.3E-28 4.3E-33 234.5 18.8 237 62-350 4-283 (450)
35 1onf_A GR, grase, glutathione 100.0 1.3E-28 4.5E-33 237.3 18.9 239 62-350 2-292 (500)
36 2r9z_A Glutathione amide reduc 100.0 1.2E-28 4.1E-33 235.4 17.9 236 62-350 4-282 (463)
37 3dgh_A TRXR-1, thioredoxin red 100.0 1.1E-28 3.7E-33 237.1 17.3 241 60-348 7-305 (483)
38 1xdi_A RV3303C-LPDA; reductase 100.0 1.7E-28 5.7E-33 236.7 18.5 244 62-350 2-297 (499)
39 3cty_A Thioredoxin reductase; 100.0 2.5E-28 8.6E-33 222.0 18.7 238 61-350 15-268 (319)
40 1zmd_A Dihydrolipoyl dehydroge 100.0 2.2E-28 7.4E-33 234.5 19.2 244 61-350 5-300 (474)
41 1zk7_A HGII, reductase, mercur 100.0 6.4E-28 2.2E-32 230.8 22.3 242 61-350 3-289 (467)
42 3dk9_A Grase, GR, glutathione 100.0 1.3E-28 4.4E-33 236.3 17.3 239 61-350 19-311 (478)
43 3h28_A Sulfide-quinone reducta 100.0 6E-28 2.1E-32 228.6 21.6 251 62-350 2-272 (430)
44 4fk1_A Putative thioredoxin re 100.0 8.9E-29 3.1E-33 223.7 14.8 239 60-350 4-252 (304)
45 2qae_A Lipoamide, dihydrolipoy 100.0 1.9E-28 6.6E-33 234.5 17.6 243 62-350 2-294 (468)
46 1trb_A Thioredoxin reductase; 100.0 1.2E-28 4.2E-33 224.0 14.2 239 62-347 5-259 (320)
47 1ebd_A E3BD, dihydrolipoamide 100.0 2.4E-28 8.3E-33 233.0 16.7 240 62-350 3-288 (455)
48 3dgz_A Thioredoxin reductase 2 100.0 2E-28 6.9E-33 235.5 16.1 243 61-350 5-306 (488)
49 2q7v_A Thioredoxin reductase; 100.0 4.6E-28 1.6E-32 220.9 17.4 240 62-350 8-264 (325)
50 1ojt_A Surface protein; redox- 100.0 1E-27 3.4E-32 230.3 19.9 248 62-350 6-304 (482)
51 2zbw_A Thioredoxin reductase; 100.0 4E-28 1.4E-32 222.1 15.9 240 62-347 5-265 (335)
52 2a8x_A Dihydrolipoyl dehydroge 100.0 2.6E-28 8.8E-33 233.4 15.2 242 62-350 3-289 (464)
53 1dxl_A Dihydrolipoamide dehydr 100.0 2.9E-28 9.9E-33 233.4 15.5 244 61-350 5-297 (470)
54 3o0h_A Glutathione reductase; 100.0 1.6E-27 5.6E-32 228.9 20.6 238 62-350 26-306 (484)
55 4dna_A Probable glutathione re 100.0 4.3E-28 1.5E-32 231.8 16.2 237 62-350 5-286 (463)
56 2q0l_A TRXR, thioredoxin reduc 100.0 1E-27 3.6E-32 217.1 17.4 237 63-350 2-261 (311)
57 4a5l_A Thioredoxin reductase; 100.0 7E-28 2.4E-32 218.4 16.2 243 62-350 4-265 (314)
58 2yqu_A 2-oxoglutarate dehydrog 100.0 5.8E-28 2E-32 230.3 15.9 239 63-350 2-282 (455)
59 3lad_A Dihydrolipoamide dehydr 100.0 1.3E-27 4.4E-32 229.3 18.1 244 61-350 2-298 (476)
60 2xve_A Flavin-containing monoo 100.0 8.2E-28 2.8E-32 229.6 16.3 233 63-350 3-293 (464)
61 3urh_A Dihydrolipoyl dehydroge 100.0 1.9E-27 6.6E-32 228.8 18.4 245 61-350 24-318 (491)
62 3r9u_A Thioredoxin reductase; 100.0 7.8E-28 2.7E-32 217.9 14.2 242 61-350 3-264 (315)
63 2eq6_A Pyruvate dehydrogenase 99.9 1.2E-27 4.2E-32 228.6 15.7 238 62-350 6-289 (464)
64 3vrd_B FCCB subunit, flavocyto 99.9 2.8E-27 9.5E-32 222.0 17.9 249 62-350 2-272 (401)
65 2x8g_A Thioredoxin glutathione 99.9 1.9E-27 6.6E-32 234.2 17.4 243 60-350 105-413 (598)
66 1fl2_A Alkyl hydroperoxide red 99.9 7.7E-27 2.6E-31 211.2 19.2 237 63-350 2-257 (310)
67 3lzw_A Ferredoxin--NADP reduct 99.9 2E-27 6.9E-32 216.8 15.2 233 62-346 7-262 (332)
68 3gwf_A Cyclohexanone monooxyge 99.9 5.6E-28 1.9E-32 234.2 12.1 236 62-342 8-392 (540)
69 2a87_A TRXR, TR, thioredoxin r 99.9 9.8E-28 3.4E-32 219.7 12.9 241 61-350 13-267 (335)
70 1v59_A Dihydrolipoamide dehydr 99.9 1.2E-26 4.2E-31 222.5 21.1 244 62-350 5-305 (478)
71 3ab1_A Ferredoxin--NADP reduct 99.9 4.1E-27 1.4E-31 217.7 16.0 237 62-347 14-276 (360)
72 1vdc_A NTR, NADPH dependent th 99.9 2.3E-27 7.9E-32 216.8 13.9 245 62-350 8-274 (333)
73 1lvl_A Dihydrolipoamide dehydr 99.9 1.2E-26 4.2E-31 221.2 19.4 234 62-348 5-284 (458)
74 4a9w_A Monooxygenase; baeyer-v 99.9 1.4E-27 4.7E-32 219.8 11.6 240 62-350 3-300 (357)
75 3ic9_A Dihydrolipoamide dehydr 99.9 4.5E-27 1.5E-31 226.2 14.5 237 62-350 8-292 (492)
76 4gcm_A TRXR, thioredoxin reduc 99.9 7.2E-27 2.5E-31 211.8 14.5 235 61-346 5-255 (312)
77 3uox_A Otemo; baeyer-villiger 99.9 3.3E-27 1.1E-31 229.1 11.9 179 61-277 8-218 (545)
78 3d1c_A Flavin-containing putat 99.9 1.1E-26 3.6E-31 215.4 14.7 234 62-345 4-283 (369)
79 4ap3_A Steroid monooxygenase; 99.9 6.5E-27 2.2E-31 227.2 13.3 236 61-342 20-404 (549)
80 2gv8_A Monooxygenase; FMO, FAD 99.9 1.2E-26 4.1E-31 220.8 13.6 226 61-342 5-305 (447)
81 3s5w_A L-ornithine 5-monooxyge 99.9 1.8E-25 6.1E-30 213.6 17.8 245 61-342 29-387 (463)
82 2vdc_G Glutamate synthase [NAD 99.9 3.9E-26 1.3E-30 216.9 12.3 244 60-350 120-396 (456)
83 1hyu_A AHPF, alkyl hydroperoxi 99.9 3.4E-25 1.2E-29 214.4 17.6 235 61-350 211-468 (521)
84 1ps9_A 2,4-dienoyl-COA reducta 99.9 3E-25 1E-29 221.1 10.9 233 60-341 371-635 (671)
85 3k30_A Histamine dehydrogenase 99.9 4E-25 1.4E-29 220.7 11.4 224 60-342 389-632 (690)
86 1o94_A Tmadh, trimethylamine d 99.9 6.6E-25 2.2E-29 220.1 11.5 229 60-342 387-654 (729)
87 1lqt_A FPRA; NADP+ derivative, 99.9 3.2E-24 1.1E-28 203.9 13.6 250 62-349 3-337 (456)
88 2gag_A Heterotetrameric sarcos 99.9 3.1E-24 1E-28 220.9 13.7 238 62-343 128-392 (965)
89 1cjc_A Protein (adrenodoxin re 99.9 5.7E-24 2E-28 202.4 13.2 250 62-350 6-346 (460)
90 4b63_A L-ornithine N5 monooxyg 99.9 3.1E-22 1.1E-26 192.6 22.7 187 57-277 34-281 (501)
91 1w4x_A Phenylacetone monooxyge 99.9 2E-23 6.9E-28 203.0 14.5 172 62-277 16-219 (542)
92 1gte_A Dihydropyrimidine dehyd 99.9 3.4E-23 1.2E-27 214.5 13.6 241 61-350 186-460 (1025)
93 1y56_A Hypothetical protein PH 99.9 2.4E-23 8.1E-28 200.2 10.1 209 62-346 108-325 (493)
94 2ywl_A Thioredoxin reductase r 99.3 7.9E-12 2.7E-16 103.3 9.0 100 232-347 3-121 (180)
95 2cul_A Glucose-inhibited divis 99.2 3E-11 1E-15 104.2 8.9 118 62-190 3-133 (232)
96 3ces_A MNMG, tRNA uridine 5-ca 99.2 2.5E-11 8.6E-16 118.2 8.7 120 62-190 28-189 (651)
97 2gqf_A Hypothetical protein HI 99.2 8.2E-12 2.8E-16 116.5 4.0 36 62-97 4-39 (401)
98 2ywl_A Thioredoxin reductase r 99.1 7.8E-11 2.7E-15 97.2 7.4 110 63-184 2-112 (180)
99 2zxi_A TRNA uridine 5-carboxym 99.1 1.8E-10 6.1E-15 111.9 8.2 120 62-190 27-188 (637)
100 3fpz_A Thiazole biosynthetic e 99.1 3.5E-12 1.2E-16 115.8 -4.0 38 61-98 64-103 (326)
101 3v76_A Flavoprotein; structura 99.0 6E-10 2.1E-14 104.3 7.8 37 61-97 26-62 (417)
102 3cp8_A TRNA uridine 5-carboxym 99.0 4E-10 1.4E-14 109.7 6.3 120 61-189 20-181 (641)
103 3nlc_A Uncharacterized protein 99.0 9.5E-10 3.3E-14 106.1 8.4 38 59-96 104-141 (549)
104 3dme_A Conserved exported prot 99.0 1.3E-08 4.5E-13 93.2 15.5 63 283-345 149-220 (369)
105 1rp0_A ARA6, thiazole biosynth 99.0 1.9E-09 6.4E-14 95.8 9.5 121 62-185 39-194 (284)
106 1ryi_A Glycine oxidase; flavop 99.0 4.5E-09 1.6E-13 97.0 12.1 61 283-344 163-228 (382)
107 3pvc_A TRNA 5-methylaminomethy 98.9 1.5E-08 5.2E-13 101.0 16.4 64 283-346 411-480 (689)
108 2gf3_A MSOX, monomeric sarcosi 98.9 8.7E-09 3E-13 95.3 13.3 74 267-343 134-213 (389)
109 3nyc_A D-arginine dehydrogenas 98.9 6E-10 2.1E-14 102.8 4.6 60 284-344 154-218 (381)
110 3pl8_A Pyranose 2-oxidase; sub 98.9 1.4E-10 4.7E-15 114.1 -0.3 38 61-98 45-82 (623)
111 1y56_B Sarcosine oxidase; dehy 98.9 3.6E-08 1.2E-12 91.0 15.7 60 283-343 148-213 (382)
112 2i0z_A NAD(FAD)-utilizing dehy 98.9 3.8E-09 1.3E-13 99.9 9.1 37 60-96 24-60 (447)
113 3ps9_A TRNA 5-methylaminomethy 98.9 2E-08 6.9E-13 99.9 14.7 62 284-345 417-483 (676)
114 2gag_B Heterotetrameric sarcos 98.9 2.6E-08 8.9E-13 92.6 14.5 60 284-344 174-239 (405)
115 2bry_A NEDD9 interacting prote 98.9 1.8E-09 6.2E-14 103.5 6.5 124 60-189 90-237 (497)
116 2e5v_A L-aspartate oxidase; ar 98.8 5.2E-10 1.8E-14 106.6 1.7 31 64-94 1-31 (472)
117 3alj_A 2-methyl-3-hydroxypyrid 98.8 4.9E-09 1.7E-13 97.0 7.7 36 62-97 11-46 (379)
118 3dje_A Fructosyl amine: oxygen 98.8 1.8E-08 6.1E-13 94.9 11.7 57 284-340 161-226 (438)
119 2bry_A NEDD9 interacting prote 98.8 2.1E-09 7.1E-14 103.1 5.0 146 170-336 37-231 (497)
120 2cul_A Glucose-inhibited divis 98.8 2.7E-08 9.3E-13 85.5 11.0 91 232-336 5-126 (232)
121 2uzz_A N-methyl-L-tryptophan o 98.8 1.3E-08 4.6E-13 93.5 9.3 56 284-340 149-209 (372)
122 3rp8_A Flavoprotein monooxygen 98.8 1.1E-08 3.7E-13 95.5 8.7 38 60-97 21-58 (407)
123 3oz2_A Digeranylgeranylglycero 98.8 2.9E-09 1E-13 98.4 4.8 36 62-97 4-39 (397)
124 3cgv_A Geranylgeranyl reductas 98.8 2.3E-08 8E-13 92.6 10.9 35 62-96 4-38 (397)
125 3i3l_A Alkylhalidase CMLS; fla 98.8 8.9E-09 3E-13 100.5 7.9 35 61-95 22-56 (591)
126 2xdo_A TETX2 protein; tetracyc 98.8 1.9E-08 6.6E-13 93.5 9.8 36 61-96 25-60 (398)
127 3kkj_A Amine oxidase, flavin-c 98.8 3.8E-09 1.3E-13 92.0 4.7 36 62-97 2-37 (336)
128 1yvv_A Amine oxidase, flavin-c 98.8 1.3E-08 4.6E-13 92.1 8.4 35 62-96 2-36 (336)
129 2x3n_A Probable FAD-dependent 98.7 1.4E-08 4.7E-13 94.5 7.5 36 62-97 6-41 (399)
130 2vou_A 2,6-dihydroxypyridine h 98.7 2.4E-08 8.3E-13 92.8 9.1 36 61-96 4-39 (397)
131 3qj4_A Renalase; FAD/NAD(P)-bi 98.7 1.3E-08 4.5E-13 92.6 6.7 34 63-96 2-38 (342)
132 3nix_A Flavoprotein/dehydrogen 98.7 8.8E-09 3E-13 96.4 5.3 34 62-95 5-38 (421)
133 3hyw_A Sulfide-quinone reducta 98.7 2.2E-08 7.5E-13 94.2 6.3 94 231-336 3-110 (430)
134 1pj5_A N,N-dimethylglycine oxi 98.7 2.2E-07 7.6E-12 94.6 14.2 61 283-344 150-216 (830)
135 3vrd_B FCCB subunit, flavocyto 98.6 4.7E-08 1.6E-12 91.0 8.2 95 230-336 2-109 (401)
136 3fmw_A Oxygenase; mithramycin, 98.6 3.1E-08 1.1E-12 96.4 7.1 36 61-96 48-83 (570)
137 3fbs_A Oxidoreductase; structu 98.6 1.3E-07 4.3E-12 83.9 10.4 91 232-336 4-113 (297)
138 3ihg_A RDME; flavoenzyme, anth 98.6 5.7E-08 1.9E-12 94.0 8.7 36 61-96 4-39 (535)
139 1y0p_A Fumarate reductase flav 98.6 7.6E-08 2.6E-12 93.9 9.6 37 61-97 125-161 (571)
140 3sx6_A Sulfide-quinone reducta 98.6 6.2E-08 2.1E-12 91.3 8.5 95 231-336 5-113 (437)
141 3da1_A Glycerol-3-phosphate de 98.6 7.4E-08 2.5E-12 93.6 9.0 61 284-344 170-241 (561)
142 1k0i_A P-hydroxybenzoate hydro 98.6 7.4E-08 2.5E-12 89.4 8.4 35 62-96 2-36 (394)
143 3atr_A Conserved archaeal prot 98.6 4.8E-08 1.7E-12 92.5 7.0 35 62-96 6-40 (453)
144 3jsk_A Cypbp37 protein; octame 98.6 2.2E-07 7.5E-12 83.9 10.8 36 62-97 79-116 (344)
145 3klj_A NAD(FAD)-dependent dehy 98.6 2.3E-07 7.9E-12 85.9 10.8 91 232-336 11-117 (385)
146 1qo8_A Flavocytochrome C3 fuma 98.6 1.2E-07 4.1E-12 92.3 8.6 38 60-97 119-156 (566)
147 4at0_A 3-ketosteroid-delta4-5a 98.6 2.3E-07 7.8E-12 89.2 10.3 37 61-97 40-76 (510)
148 4hb9_A Similarities with proba 98.5 1.3E-07 4.3E-12 87.9 8.0 35 63-97 2-36 (412)
149 2q7v_A Thioredoxin reductase; 98.5 3E-07 1E-11 82.9 10.2 92 231-336 9-124 (325)
150 3f8d_A Thioredoxin reductase ( 98.5 2.8E-07 9.6E-12 82.6 10.0 92 231-336 16-126 (323)
151 2qa1_A PGAE, polyketide oxygen 98.5 2.2E-07 7.5E-12 89.1 9.8 38 60-97 9-46 (500)
152 3itj_A Thioredoxin reductase 1 98.5 2.2E-07 7.5E-12 83.9 9.1 94 229-336 21-143 (338)
153 3h8l_A NADH oxidase; membrane 98.5 1.1E-07 3.7E-12 88.8 7.3 95 231-336 2-114 (409)
154 2qa2_A CABE, polyketide oxygen 98.5 2.5E-07 8.7E-12 88.6 9.6 38 60-97 10-47 (499)
155 1d4d_A Flavocytochrome C fumar 98.5 1.7E-06 5.7E-11 84.4 15.4 37 61-97 125-161 (572)
156 3e1t_A Halogenase; flavoprotei 98.5 1.1E-07 3.8E-12 91.4 7.0 34 62-95 7-40 (512)
157 1nhp_A NADH peroxidase; oxidor 98.5 3E-07 1E-11 86.9 9.6 101 61-185 148-249 (447)
158 3r9u_A Thioredoxin reductase; 98.5 5.8E-07 2E-11 80.3 10.9 92 231-336 5-119 (315)
159 3c96_A Flavin-containing monoo 98.5 1.5E-07 5.2E-12 87.8 7.2 35 62-96 4-39 (410)
160 4a9w_A Monooxygenase; baeyer-v 98.5 4.7E-07 1.6E-11 82.2 10.1 88 232-334 5-131 (357)
161 2yqu_A 2-oxoglutarate dehydrog 98.5 1.9E-07 6.5E-12 88.4 7.4 101 62-186 167-268 (455)
162 2q0l_A TRXR, thioredoxin reduc 98.5 6.4E-07 2.2E-11 80.0 10.3 91 232-336 3-115 (311)
163 3alj_A 2-methyl-3-hydroxypyrid 98.5 1.6E-06 5.6E-11 79.8 13.3 92 231-336 12-161 (379)
164 2r0c_A REBC; flavin adenine di 98.5 2.4E-07 8.1E-12 89.9 7.7 36 62-97 26-61 (549)
165 3lzw_A Ferredoxin--NADP reduct 98.5 4.6E-07 1.6E-11 81.6 9.1 91 231-336 8-127 (332)
166 2v3a_A Rubredoxin reductase; a 98.5 5E-07 1.7E-11 83.6 9.3 100 62-184 145-245 (384)
167 3nlc_A Uncharacterized protein 98.5 2.6E-07 8.9E-12 89.1 7.6 103 231-347 108-292 (549)
168 2eq6_A Pyruvate dehydrogenase 98.4 4.2E-07 1.4E-11 86.3 8.8 104 62-186 169-275 (464)
169 2aqj_A Tryptophan halogenase, 98.4 3.7E-07 1.3E-11 88.3 8.4 34 62-95 5-41 (538)
170 1q1r_A Putidaredoxin reductase 98.4 6E-07 2.1E-11 84.4 9.4 94 231-336 5-115 (431)
171 3ef6_A Toluene 1,2-dioxygenase 98.4 1.1E-06 3.9E-11 81.9 11.0 94 231-336 3-112 (410)
172 3c4n_A Uncharacterized protein 98.4 1.8E-07 6.3E-12 87.2 5.4 34 62-95 36-71 (405)
173 3h28_A Sulfide-quinone reducta 98.4 1.8E-07 6.1E-12 88.0 5.3 94 231-336 3-110 (430)
174 3v76_A Flavoprotein; structura 98.4 7.5E-07 2.6E-11 83.3 9.3 89 232-335 29-187 (417)
175 2gjc_A Thiazole biosynthetic e 98.4 8.6E-07 2.9E-11 79.5 9.3 36 62-97 65-102 (326)
176 1fl2_A Alkyl hydroperoxide red 98.4 1.1E-06 3.8E-11 78.4 10.0 91 232-336 3-116 (310)
177 1lvl_A Dihydrolipoamide dehydr 98.4 2.9E-07 9.8E-12 87.3 6.2 101 62-186 171-272 (458)
178 2zbw_A Thioredoxin reductase; 98.4 9.1E-07 3.1E-11 79.9 9.2 90 231-334 6-120 (335)
179 4gde_A UDP-galactopyranose mut 98.4 1.1E-07 3.7E-12 91.3 3.3 49 284-332 222-273 (513)
180 3lxd_A FAD-dependent pyridine 98.4 9.3E-07 3.2E-11 82.6 9.4 101 62-184 152-253 (415)
181 3ab1_A Ferredoxin--NADP reduct 98.4 2.5E-06 8.5E-11 77.9 11.9 90 231-334 15-130 (360)
182 1ebd_A E3BD, dihydrolipoamide 98.4 1.1E-06 3.9E-11 83.0 9.8 104 62-186 170-274 (455)
183 3d1c_A Flavin-containing putat 98.4 2.5E-06 8.6E-11 78.0 11.8 90 232-336 6-144 (369)
184 1v59_A Dihydrolipoamide dehydr 98.4 7.6E-07 2.6E-11 84.8 8.3 103 62-185 183-290 (478)
185 3fg2_P Putative rubredoxin red 98.4 8.1E-07 2.8E-11 82.7 8.4 101 62-184 142-243 (404)
186 4dgk_A Phytoene dehydrogenase; 98.4 1.9E-07 6.5E-12 89.4 4.1 52 284-335 221-278 (501)
187 1vdc_A NTR, NADPH dependent th 98.3 1E-06 3.4E-11 79.6 8.4 91 231-336 9-125 (333)
188 1rp0_A ARA6, thiazole biosynth 98.3 2.5E-06 8.6E-11 75.4 10.8 91 232-336 41-192 (284)
189 2gqw_A Ferredoxin reductase; f 98.3 1.1E-06 3.9E-11 81.9 8.8 96 62-184 145-241 (408)
190 2a87_A TRXR, TR, thioredoxin r 98.3 1.7E-06 5.7E-11 78.3 9.4 92 231-336 15-127 (335)
191 2bc0_A NADH oxidase; flavoprot 98.3 1.5E-06 5.2E-11 83.0 9.2 101 61-185 193-294 (490)
192 3cty_A Thioredoxin reductase; 98.3 3E-06 1E-10 76.0 10.5 91 231-336 17-127 (319)
193 2gqf_A Hypothetical protein HI 98.3 4.1E-06 1.4E-10 77.9 11.6 90 232-336 6-169 (401)
194 4fk1_A Putative thioredoxin re 98.3 2.8E-06 9.6E-11 75.8 10.1 91 232-336 8-118 (304)
195 3kd9_A Coenzyme A disulfide re 98.3 2.4E-06 8.4E-11 80.6 10.0 94 231-336 4-115 (449)
196 1zmd_A Dihydrolipoyl dehydroge 98.3 1.4E-06 4.8E-11 82.9 8.4 102 62-185 178-285 (474)
197 4b1b_A TRXR, thioredoxin reduc 98.3 1.2E-06 4.2E-11 84.4 8.0 100 62-186 223-323 (542)
198 1trb_A Thioredoxin reductase; 98.3 2.2E-06 7.5E-11 76.8 9.2 92 231-336 6-117 (320)
199 1ges_A Glutathione reductase; 98.3 1E-06 3.4E-11 83.4 7.2 100 62-185 167-268 (450)
200 4a5l_A Thioredoxin reductase; 98.3 3.4E-06 1.2E-10 75.3 10.2 91 232-336 6-122 (314)
201 2a8x_A Dihydrolipoyl dehydroge 98.3 1.5E-06 5E-11 82.5 7.9 104 62-186 171-275 (464)
202 3oc4_A Oxidoreductase, pyridin 98.3 4.9E-06 1.7E-10 78.6 11.4 101 62-186 147-248 (452)
203 1ojt_A Surface protein; redox- 98.3 1.2E-06 4.1E-11 83.6 7.1 101 62-185 185-289 (482)
204 2cdu_A NADPH oxidase; flavoenz 98.2 2E-06 6.8E-11 81.3 8.3 101 62-185 149-250 (452)
205 1hyu_A AHPF, alkyl hydroperoxi 98.2 3.8E-06 1.3E-10 80.8 10.3 92 231-336 213-327 (521)
206 3ihm_A Styrene monooxygenase A 98.2 5.3E-07 1.8E-11 84.8 4.1 35 61-95 21-55 (430)
207 1kf6_A Fumarate reductase flav 98.2 3.1E-06 1.1E-10 82.8 9.5 35 62-96 5-41 (602)
208 3ic9_A Dihydrolipoamide dehydr 98.2 2.8E-06 9.5E-11 81.2 8.9 103 62-186 174-278 (492)
209 1onf_A GR, grase, glutathione 98.2 2.6E-06 9E-11 81.6 8.8 100 62-185 176-278 (500)
210 1xhc_A NADH oxidase /nitrite r 98.2 7E-06 2.4E-10 75.4 11.0 90 231-336 9-114 (367)
211 2bcg_G Secretory pathway GDP d 98.2 9.3E-07 3.2E-11 83.6 5.3 52 284-336 242-301 (453)
212 2r9z_A Glutathione amide reduc 98.2 4E-06 1.4E-10 79.5 9.6 90 232-336 6-143 (463)
213 3k7m_X 6-hydroxy-L-nicotine ox 98.2 7.1E-07 2.4E-11 83.7 4.3 36 63-98 2-37 (431)
214 3urh_A Dihydrolipoyl dehydroge 98.2 3.5E-06 1.2E-10 80.5 9.0 104 62-186 198-304 (491)
215 3nks_A Protoporphyrinogen oxid 98.2 1.1E-06 3.7E-11 83.6 5.2 37 62-98 2-40 (477)
216 2x3n_A Probable FAD-dependent 98.2 8.6E-06 2.9E-10 75.5 11.2 91 232-336 8-167 (399)
217 3o0h_A Glutathione reductase; 98.2 5.1E-06 1.7E-10 79.2 9.8 91 232-336 28-167 (484)
218 2hqm_A GR, grase, glutathione 98.2 2.2E-06 7.4E-11 81.7 7.1 99 62-184 185-287 (479)
219 3iwa_A FAD-dependent pyridine 98.2 3.1E-06 1.1E-10 80.4 8.2 100 62-184 159-260 (472)
220 2xve_A Flavin-containing monoo 98.2 1E-05 3.5E-10 76.7 11.7 92 231-336 3-169 (464)
221 2gv8_A Monooxygenase; FMO, FAD 98.2 8.5E-06 2.9E-10 76.8 11.0 85 61-186 211-296 (447)
222 3cgb_A Pyridine nucleotide-dis 98.2 2.5E-06 8.7E-11 81.2 7.5 100 61-185 185-285 (480)
223 2qae_A Lipoamide, dihydrolipoy 98.2 3.5E-06 1.2E-10 80.0 8.4 103 62-185 174-279 (468)
224 3ka7_A Oxidoreductase; structu 98.2 1.1E-06 3.8E-11 82.1 4.8 52 284-336 196-253 (425)
225 3nrn_A Uncharacterized protein 98.2 1.1E-06 3.8E-11 82.2 4.8 54 283-336 188-244 (421)
226 1fec_A Trypanothione reductase 98.2 3.2E-06 1.1E-10 80.7 8.0 100 62-185 187-291 (490)
227 2wpf_A Trypanothione reductase 98.2 2.9E-06 9.9E-11 81.2 7.6 100 62-185 191-295 (495)
228 1c0p_A D-amino acid oxidase; a 98.2 1.5E-06 5.2E-11 79.5 5.2 35 61-95 5-39 (363)
229 3i6d_A Protoporphyrinogen oxid 98.2 7.5E-07 2.5E-11 84.3 3.1 37 62-98 5-47 (470)
230 3lad_A Dihydrolipoamide dehydr 98.2 6.7E-06 2.3E-10 78.2 9.8 103 62-185 180-283 (476)
231 1xdi_A RV3303C-LPDA; reductase 98.2 3E-06 1E-10 81.2 7.3 100 62-185 182-282 (499)
232 2e1m_A L-glutamate oxidase; L- 98.1 1.9E-06 6.5E-11 79.1 5.6 37 61-97 43-80 (376)
233 2i0z_A NAD(FAD)-utilizing dehy 98.1 1.1E-05 3.7E-10 76.1 11.0 91 231-335 27-191 (447)
234 3ntd_A FAD-dependent pyridine 98.1 4.8E-06 1.7E-10 80.9 8.8 99 62-184 151-269 (565)
235 4ap3_A Steroid monooxygenase; 98.1 9.5E-06 3.2E-10 78.5 10.7 92 231-336 22-162 (549)
236 2b9w_A Putative aminooxidase; 98.1 1.7E-06 5.7E-11 81.0 5.3 37 61-97 5-42 (424)
237 2oln_A NIKD protein; flavoprot 98.1 9.3E-07 3.2E-11 81.9 3.5 35 62-96 4-38 (397)
238 3ics_A Coenzyme A-disulfide re 98.1 4.2E-06 1.4E-10 81.8 8.1 97 62-184 187-284 (588)
239 4eqs_A Coenzyme A disulfide re 98.1 3.8E-06 1.3E-10 79.0 7.5 96 62-185 147-243 (437)
240 3l8k_A Dihydrolipoyl dehydroge 98.1 1E-05 3.5E-10 76.7 10.5 91 232-336 6-145 (466)
241 1s3e_A Amine oxidase [flavin-c 98.1 1.5E-06 5.1E-11 83.7 4.7 37 62-98 4-40 (520)
242 1rsg_A FMS1 protein; FAD bindi 98.1 1E-06 3.5E-11 84.8 3.5 37 62-98 8-45 (516)
243 4dna_A Probable glutathione re 98.1 5.1E-06 1.7E-10 78.7 8.3 91 232-336 7-146 (463)
244 4g6h_A Rotenone-insensitive NA 98.1 2.3E-06 7.7E-11 82.0 5.8 92 231-336 43-170 (502)
245 4gcm_A TRXR, thioredoxin reduc 98.1 1.4E-05 4.7E-10 71.4 10.7 91 232-336 8-117 (312)
246 2gmh_A Electron transfer flavo 98.1 2.3E-06 7.9E-11 83.5 5.8 38 60-97 33-76 (584)
247 1zk7_A HGII, reductase, mercur 98.1 3.6E-06 1.2E-10 79.9 7.0 98 62-185 176-274 (467)
248 2jae_A L-amino acid oxidase; o 98.1 2.3E-06 7.8E-11 81.6 5.5 37 61-97 10-46 (489)
249 3uox_A Otemo; baeyer-villiger 98.1 1.1E-05 3.9E-10 77.9 10.3 92 231-336 10-150 (545)
250 3gwf_A Cyclohexanone monooxyge 98.1 1.1E-05 3.8E-10 77.9 10.2 89 231-333 9-145 (540)
251 2vdc_G Glutamate synthase [NAD 98.1 3E-06 1E-10 80.1 6.1 89 228-334 120-218 (456)
252 3s5w_A L-ornithine 5-monooxyge 98.1 1E-05 3.5E-10 76.5 9.8 96 232-336 32-193 (463)
253 3dk9_A Grase, GR, glutathione 98.1 7.3E-06 2.5E-10 78.0 8.7 105 62-185 187-296 (478)
254 1mo9_A ORF3; nucleotide bindin 98.1 1.5E-05 5.1E-10 76.8 10.8 91 231-336 44-187 (523)
255 1m6i_A Programmed cell death p 98.1 7.3E-06 2.5E-10 78.3 8.5 101 62-185 180-285 (493)
256 1dxl_A Dihydrolipoamide dehydr 98.1 2.1E-05 7.2E-10 74.6 11.5 92 231-336 7-152 (470)
257 2ivd_A PPO, PPOX, protoporphyr 98.1 2.7E-06 9.4E-11 80.8 4.8 38 61-98 15-52 (478)
258 1v0j_A UDP-galactopyranose mut 98.0 3E-06 1E-10 78.7 5.0 37 62-98 7-44 (399)
259 3hdq_A UDP-galactopyranose mut 98.0 3.2E-06 1.1E-10 78.2 4.8 38 61-98 28-65 (397)
260 2yg5_A Putrescine oxidase; oxi 98.0 1.7E-06 6E-11 81.6 3.1 36 62-97 5-40 (453)
261 3nix_A Flavoprotein/dehydrogen 98.0 1.9E-05 6.6E-10 73.5 10.1 91 232-336 7-167 (421)
262 2vvm_A Monoamine oxidase N; FA 98.0 3.6E-06 1.2E-10 80.4 5.1 51 284-334 255-311 (495)
263 3c4a_A Probable tryptophan hyd 98.0 3E-06 1E-10 78.2 4.3 35 63-97 1-37 (381)
264 3ces_A MNMG, tRNA uridine 5-ca 98.0 3E-05 1E-09 75.7 11.4 91 232-336 30-182 (651)
265 3lov_A Protoporphyrinogen oxid 98.0 4.4E-06 1.5E-10 79.3 4.9 36 62-97 4-41 (475)
266 1sez_A Protoporphyrinogen oxid 98.0 4.6E-06 1.6E-10 79.8 5.1 37 61-97 12-48 (504)
267 3dgz_A Thioredoxin reductase 2 98.0 1.6E-05 5.6E-10 75.8 8.4 102 62-185 185-290 (488)
268 3dgh_A TRXR-1, thioredoxin red 98.0 1.6E-05 5.5E-10 75.7 8.2 102 62-185 187-292 (483)
269 1i8t_A UDP-galactopyranose mut 98.0 5.3E-06 1.8E-10 76.2 4.7 35 63-97 2-36 (367)
270 2vou_A 2,6-dihydroxypyridine h 98.0 4E-05 1.4E-09 70.9 10.7 92 231-336 6-154 (397)
271 1gte_A Dihydropyrimidine dehyd 98.0 3.6E-06 1.2E-10 87.4 3.9 92 229-336 186-289 (1025)
272 2iid_A L-amino-acid oxidase; f 98.0 6.2E-06 2.1E-10 78.8 5.3 38 61-98 32-69 (498)
273 3g3e_A D-amino-acid oxidase; F 97.9 3.7E-06 1.3E-10 76.5 3.4 33 63-95 1-39 (351)
274 3qfa_A Thioredoxin reductase 1 97.9 2.4E-05 8.2E-10 75.2 9.2 104 62-186 210-319 (519)
275 2weu_A Tryptophan 5-halogenase 97.9 4.2E-06 1.4E-10 80.4 3.8 34 62-95 2-38 (511)
276 2bi7_A UDP-galactopyranose mut 97.9 7.3E-06 2.5E-10 75.7 5.1 37 62-98 3-39 (384)
277 2qcu_A Aerobic glycerol-3-phos 97.9 5.6E-06 1.9E-10 79.3 4.3 34 62-95 3-36 (501)
278 2zxi_A TRNA uridine 5-carboxym 97.9 6.7E-05 2.3E-09 73.0 11.8 91 232-336 29-181 (637)
279 3cp8_A TRNA uridine 5-carboxym 97.9 5.1E-05 1.7E-09 74.0 10.9 91 232-336 23-175 (641)
280 1k0i_A P-hydroxybenzoate hydro 97.9 6.5E-05 2.2E-09 69.3 11.2 91 232-336 4-164 (394)
281 2e4g_A Tryptophan halogenase; 97.9 8E-06 2.7E-10 79.2 5.2 53 284-336 194-253 (550)
282 2dkh_A 3-hydroxybenzoate hydro 97.9 1.2E-05 4E-10 79.4 6.2 35 62-96 32-67 (639)
283 3g5s_A Methylenetetrahydrofola 97.9 9.1E-06 3.1E-10 74.2 4.5 33 63-95 2-34 (443)
284 3i3l_A Alkylhalidase CMLS; fla 97.9 0.0001 3.4E-09 71.9 12.2 92 231-336 24-189 (591)
285 1lqt_A FPRA; NADP+ derivative, 97.9 8.8E-06 3E-10 76.9 4.6 93 231-335 4-108 (456)
286 4dsg_A UDP-galactopyranose mut 97.9 9.2E-06 3.1E-10 77.4 4.8 37 61-97 8-45 (484)
287 1yvv_A Amine oxidase, flavin-c 97.9 9.5E-05 3.2E-09 66.5 11.2 89 232-335 4-162 (336)
288 2pyx_A Tryptophan halogenase; 97.9 8.7E-06 3E-10 78.4 4.4 34 62-95 7-52 (526)
289 3axb_A Putative oxidoreductase 97.8 4.7E-06 1.6E-10 78.5 2.4 34 61-94 22-56 (448)
290 1cjc_A Protein (adrenodoxin re 97.8 1.5E-05 5.3E-10 75.3 5.6 88 231-335 7-106 (460)
291 1d5t_A Guanine nucleotide diss 97.8 1.5E-05 5.1E-10 74.8 5.2 53 284-336 234-291 (433)
292 1w4x_A Phenylacetone monooxyge 97.8 0.0001 3.5E-09 71.2 11.1 89 232-334 18-153 (542)
293 4g65_A TRK system potassium up 97.8 0.00039 1.3E-08 65.6 14.7 34 62-95 3-36 (461)
294 1y0p_A Fumarate reductase flav 97.8 9.5E-05 3.3E-09 71.9 10.8 51 286-336 257-318 (571)
295 3rp8_A Flavoprotein monooxygen 97.8 0.00014 4.9E-09 67.3 11.5 90 231-336 24-182 (407)
296 1chu_A Protein (L-aspartate ox 97.8 1.2E-05 4.1E-10 77.7 4.2 35 61-96 7-41 (540)
297 2rgh_A Alpha-glycerophosphate 97.8 1.3E-05 4.3E-10 78.1 4.4 34 62-95 32-65 (571)
298 2wdq_A Succinate dehydrogenase 97.8 8.4E-06 2.9E-10 79.5 3.0 35 62-96 7-41 (588)
299 3c4n_A Uncharacterized protein 97.8 4.9E-05 1.7E-09 70.6 7.8 59 286-345 174-247 (405)
300 2aqj_A Tryptophan halogenase, 97.8 0.00024 8.3E-09 68.5 12.9 49 288-336 169-223 (538)
301 2z3y_A Lysine-specific histone 97.8 2.4E-05 8.2E-10 77.5 5.8 38 60-97 105-142 (662)
302 1qo8_A Flavocytochrome C3 fuma 97.8 0.00014 4.7E-09 70.7 11.1 51 286-336 252-313 (566)
303 3p1w_A Rabgdi protein; GDI RAB 97.7 1.7E-05 5.9E-10 74.9 4.3 51 284-334 256-313 (475)
304 2bs2_A Quinol-fumarate reducta 97.7 1.9E-05 6.4E-10 78.0 4.6 35 62-96 5-39 (660)
305 3k30_A Histamine dehydrogenase 97.7 6.4E-05 2.2E-09 74.8 8.5 101 62-184 523-626 (690)
306 2h88_A Succinate dehydrogenase 97.7 1.5E-05 5E-10 78.2 3.7 34 62-95 18-51 (621)
307 2xdo_A TETX2 protein; tetracyc 97.7 0.00015 5.1E-09 67.1 10.4 90 231-336 27-183 (398)
308 1pn0_A Phenol 2-monooxygenase; 97.7 1.6E-05 5.4E-10 78.8 3.9 35 62-96 8-47 (665)
309 2xag_A Lysine-specific histone 97.7 2.9E-05 9.9E-10 78.6 5.7 38 60-97 276-313 (852)
310 3fmw_A Oxygenase; mithramycin, 97.7 0.00014 4.7E-09 70.7 10.3 91 232-336 51-208 (570)
311 2oln_A NIKD protein; flavoprot 97.7 0.00018 6.2E-09 66.4 10.6 57 286-343 155-216 (397)
312 3qj4_A Renalase; FAD/NAD(P)-bi 97.7 9.6E-05 3.3E-09 66.8 8.6 37 297-333 122-163 (342)
313 2x8g_A Thioredoxin glutathione 97.7 7.8E-05 2.7E-09 72.9 8.5 102 62-185 286-398 (598)
314 3atr_A Conserved archaeal prot 97.7 7E-05 2.4E-09 70.6 7.8 91 232-336 8-163 (453)
315 4hb9_A Similarities with proba 97.7 0.00028 9.7E-09 65.0 11.6 32 232-277 3-34 (412)
316 4gut_A Lysine-specific histone 97.7 2.5E-05 8.6E-10 78.4 4.6 37 61-97 335-371 (776)
317 1kdg_A CDH, cellobiose dehydro 97.7 2.5E-05 8.5E-10 75.6 4.2 37 60-96 5-41 (546)
318 1jnr_A Adenylylsulfate reducta 97.7 2.9E-05 1E-09 76.6 4.6 36 61-96 21-60 (643)
319 2gmh_A Electron transfer flavo 97.6 0.00028 9.6E-09 68.7 11.5 61 285-345 145-230 (584)
320 3gyx_A Adenylylsulfate reducta 97.6 2.6E-05 9E-10 76.9 4.0 35 61-95 21-61 (662)
321 1b37_A Protein (polyamine oxid 97.6 3.4E-05 1.2E-09 73.2 4.6 36 62-97 4-40 (472)
322 1ps9_A 2,4-dienoyl-COA reducta 97.6 8.2E-05 2.8E-09 73.8 7.1 83 229-336 372-468 (671)
323 3ihg_A RDME; flavoenzyme, anth 97.6 0.00023 7.7E-09 68.6 9.9 52 285-336 121-184 (535)
324 3e1t_A Halogenase; flavoprotei 97.6 0.00031 1E-08 67.3 10.8 51 286-336 113-173 (512)
325 2qa2_A CABE, polyketide oxygen 97.6 0.00053 1.8E-08 65.5 12.1 93 230-336 12-167 (499)
326 3t37_A Probable dehydrogenase; 97.6 5.9E-05 2E-09 72.5 5.4 35 62-96 17-52 (526)
327 2qa1_A PGAE, polyketide oxygen 97.5 0.00059 2E-08 65.2 11.1 93 230-336 11-166 (500)
328 3ayj_A Pro-enzyme of L-phenyla 97.5 5.1E-05 1.7E-09 75.0 3.3 36 62-97 56-100 (721)
329 3c96_A Flavin-containing monoo 97.4 0.0008 2.7E-08 62.4 10.8 91 232-336 6-170 (410)
330 2gag_A Heterotetrameric sarcos 97.4 0.0004 1.4E-08 71.7 9.4 91 232-336 130-254 (965)
331 3jsk_A Cypbp37 protein; octame 97.4 0.0012 4E-08 59.5 11.3 92 231-336 80-252 (344)
332 2gjc_A Thiazole biosynthetic e 97.4 0.0014 4.7E-08 58.7 11.7 91 232-336 67-240 (326)
333 3q9t_A Choline dehydrogenase a 97.4 0.00011 3.7E-09 71.4 4.6 36 61-96 5-41 (577)
334 1y56_A Hypothetical protein PH 97.4 0.00015 5.3E-09 69.1 5.6 90 231-336 109-220 (493)
335 2e4g_A Tryptophan halogenase; 97.4 0.0018 6.1E-08 62.6 13.1 33 231-277 26-61 (550)
336 1ju2_A HydroxynitrIle lyase; f 97.4 8.8E-05 3E-09 71.5 3.8 34 62-96 26-59 (536)
337 3c4a_A Probable tryptophan hyd 97.4 0.00025 8.6E-09 65.2 6.4 83 232-335 2-143 (381)
338 2pyx_A Tryptophan halogenase; 97.3 0.0017 5.6E-08 62.4 12.3 50 287-336 178-234 (526)
339 1o94_A Tmadh, trimethylamine d 97.3 0.00023 7.7E-09 71.3 6.1 106 62-184 528-648 (729)
340 2qcu_A Aerobic glycerol-3-phos 97.3 0.00075 2.6E-08 64.4 9.4 56 285-340 150-215 (501)
341 2weu_A Tryptophan 5-halogenase 97.3 0.002 6.9E-08 61.5 11.8 52 285-336 174-231 (511)
342 1coy_A Cholesterol oxidase; ox 97.2 0.00022 7.4E-09 68.3 4.6 36 61-96 10-45 (507)
343 3qvp_A Glucose oxidase; oxidor 97.2 0.0002 6.9E-09 69.5 4.2 35 61-95 18-53 (583)
344 1n4w_A CHOD, cholesterol oxida 97.2 0.00018 6E-09 68.9 3.7 37 61-97 4-40 (504)
345 3oz2_A Digeranylgeranylglycero 97.2 0.0013 4.6E-08 60.0 9.2 91 232-336 6-163 (397)
346 4at0_A 3-ketosteroid-delta4-5a 97.2 0.0022 7.6E-08 61.3 11.0 51 285-335 203-264 (510)
347 3fim_B ARYL-alcohol oxidase; A 97.1 0.00021 7.3E-09 69.1 3.2 36 62-97 2-38 (566)
348 1gpe_A Protein (glucose oxidas 97.0 0.00046 1.6E-08 67.2 4.9 37 61-97 23-60 (587)
349 2jbv_A Choline oxidase; alcoho 97.0 0.0004 1.4E-08 67.1 4.3 37 61-97 12-49 (546)
350 3fwz_A Inner membrane protein 97.0 0.00071 2.4E-08 52.7 4.9 37 60-96 5-41 (140)
351 2e5v_A L-aspartate oxidase; ar 97.0 0.0028 9.6E-08 60.0 9.6 49 287-336 122-177 (472)
352 2dkh_A 3-hydroxybenzoate hydro 96.8 0.0031 1.1E-07 62.1 9.0 52 285-336 142-212 (639)
353 2g1u_A Hypothetical protein TM 96.8 0.0013 4.6E-08 52.0 4.9 36 61-96 18-53 (155)
354 2rgh_A Alpha-glycerophosphate 96.8 0.0054 1.8E-07 59.5 9.9 58 286-343 190-258 (571)
355 2r0c_A REBC; flavin adenine di 96.7 0.01 3.5E-07 57.2 11.3 49 285-336 139-197 (549)
356 4b63_A L-ornithine N5 monooxyg 96.7 0.0065 2.2E-07 57.9 9.5 105 232-336 41-215 (501)
357 3llv_A Exopolyphosphatase-rela 96.6 0.0017 5.7E-08 50.5 4.0 35 62-96 6-40 (141)
358 3dfz_A SIRC, precorrin-2 dehyd 96.5 0.0018 6.1E-08 54.6 4.1 75 229-336 30-104 (223)
359 1id1_A Putative potassium chan 96.5 0.0026 9E-08 50.2 4.7 34 62-95 3-36 (153)
360 1lss_A TRK system potassium up 96.5 0.0021 7.2E-08 49.5 4.0 34 63-96 5-38 (140)
361 3ic5_A Putative saccharopine d 96.5 0.0022 7.6E-08 47.7 3.8 34 62-95 5-39 (118)
362 3c85_A Putative glutathione-re 96.2 0.0036 1.2E-07 50.9 4.3 35 62-96 39-74 (183)
363 1vg0_A RAB proteins geranylger 96.2 0.004 1.4E-07 60.8 5.0 54 284-337 378-439 (650)
364 3dfz_A SIRC, precorrin-2 dehyd 96.1 0.0056 1.9E-07 51.5 4.8 35 61-95 30-64 (223)
365 1pzg_A LDH, lactate dehydrogen 96.0 0.0066 2.3E-07 54.5 5.2 36 61-96 8-44 (331)
366 4gut_A Lysine-specific histone 96.0 0.056 1.9E-06 54.2 12.3 35 298-332 543-582 (776)
367 2hmt_A YUAA protein; RCK, KTN, 95.9 0.0055 1.9E-07 47.3 3.8 33 63-95 7-39 (144)
368 1chu_A Protein (L-aspartate ox 95.9 0.015 5.1E-07 55.9 7.6 31 232-277 10-40 (540)
369 3kkj_A Amine oxidase, flavin-c 95.9 0.0051 1.7E-07 52.5 3.9 32 232-277 4-35 (336)
370 1kf6_A Fumarate reductase flav 95.9 0.033 1.1E-06 54.3 9.9 51 286-336 136-198 (602)
371 3lk7_A UDP-N-acetylmuramoylala 95.8 0.0075 2.6E-07 56.6 5.0 35 61-95 8-42 (451)
372 2wdq_A Succinate dehydrogenase 95.8 0.059 2E-06 52.3 11.4 50 287-336 146-207 (588)
373 1kyq_A Met8P, siroheme biosynt 95.7 0.0066 2.2E-07 52.8 3.7 34 62-95 13-46 (274)
374 3lk7_A UDP-N-acetylmuramoylala 95.7 0.0097 3.3E-07 55.9 4.9 86 229-345 8-98 (451)
375 3l4b_C TRKA K+ channel protien 95.6 0.0068 2.3E-07 50.8 3.5 34 63-96 1-34 (218)
376 4dio_A NAD(P) transhydrogenase 95.6 0.011 3.7E-07 54.3 4.9 36 61-96 189-224 (405)
377 2x5o_A UDP-N-acetylmuramoylala 95.6 0.0075 2.6E-07 56.4 3.8 35 62-96 5-39 (439)
378 1pn0_A Phenol 2-monooxygenase; 95.5 0.057 2E-06 53.3 10.1 20 232-251 10-29 (665)
379 3eag_A UDP-N-acetylmuramate:L- 95.5 0.02 6.9E-07 51.2 6.0 83 230-345 4-92 (326)
380 2h88_A Succinate dehydrogenase 95.4 0.073 2.5E-06 52.0 10.3 50 287-336 158-218 (621)
381 3p2y_A Alanine dehydrogenase/p 95.4 0.013 4.3E-07 53.4 4.4 36 61-96 183-218 (381)
382 1f0y_A HCDH, L-3-hydroxyacyl-C 95.3 0.017 5.8E-07 51.0 5.1 34 63-96 16-49 (302)
383 3i83_A 2-dehydropantoate 2-red 95.3 0.015 5.3E-07 51.8 4.6 33 63-95 3-35 (320)
384 3oj0_A Glutr, glutamyl-tRNA re 95.2 0.015 5.3E-07 45.1 4.0 35 62-96 21-55 (144)
385 4e12_A Diketoreductase; oxidor 95.2 0.018 6.3E-07 50.3 4.7 35 62-96 4-38 (283)
386 3doj_A AT3G25530, dehydrogenas 95.1 0.023 7.9E-07 50.4 5.1 37 60-96 19-55 (310)
387 3vtf_A UDP-glucose 6-dehydroge 95.0 0.024 8.3E-07 52.7 5.2 35 61-95 20-54 (444)
388 1x13_A NAD(P) transhydrogenase 95.0 0.023 7.7E-07 52.5 4.9 35 62-96 172-206 (401)
389 2a9f_A Putative malic enzyme ( 94.9 0.019 6.6E-07 52.1 4.2 35 61-95 187-222 (398)
390 3gg2_A Sugar dehydrogenase, UD 94.9 0.019 6.5E-07 53.8 4.3 34 63-96 3-36 (450)
391 3hn2_A 2-dehydropantoate 2-red 94.9 0.018 6.3E-07 51.1 4.0 33 63-95 3-35 (312)
392 3ado_A Lambda-crystallin; L-gu 94.9 0.019 6.6E-07 51.0 4.0 34 63-96 7-40 (319)
393 4ffl_A PYLC; amino acid, biosy 94.8 0.025 8.5E-07 51.3 4.7 34 63-96 2-35 (363)
394 1l7d_A Nicotinamide nucleotide 94.7 0.029 9.9E-07 51.4 5.0 36 61-96 171-206 (384)
395 3eag_A UDP-N-acetylmuramate:L- 94.7 0.027 9.3E-07 50.4 4.6 36 61-96 3-39 (326)
396 1lld_A L-lactate dehydrogenase 94.7 0.028 9.4E-07 50.0 4.6 34 62-95 7-42 (319)
397 2ew2_A 2-dehydropantoate 2-red 94.7 0.024 8.2E-07 50.1 4.2 34 63-96 4-37 (316)
398 2raf_A Putative dinucleotide-b 94.7 0.032 1.1E-06 46.4 4.7 35 62-96 19-53 (209)
399 1pjq_A CYSG, siroheme synthase 94.6 0.036 1.2E-06 52.1 5.4 74 229-335 11-84 (457)
400 2o3j_A UDP-glucose 6-dehydroge 94.6 0.028 9.4E-07 53.2 4.5 34 62-95 9-44 (481)
401 1jw9_B Molybdopterin biosynthe 94.6 0.029 9.8E-07 48.1 4.2 34 62-95 31-65 (249)
402 2ewd_A Lactate dehydrogenase,; 94.5 0.034 1.2E-06 49.5 4.8 35 62-96 4-39 (317)
403 4dll_A 2-hydroxy-3-oxopropiona 94.5 0.028 9.7E-07 50.1 4.3 36 61-96 30-65 (320)
404 1vl6_A Malate oxidoreductase; 94.5 0.029 9.8E-07 50.9 4.2 34 61-94 191-225 (388)
405 2y0c_A BCEC, UDP-glucose dehyd 94.5 0.028 9.4E-07 53.1 4.3 34 62-95 8-41 (478)
406 1ks9_A KPA reductase;, 2-dehyd 94.5 0.034 1.2E-06 48.5 4.7 33 64-96 2-34 (291)
407 3ghy_A Ketopantoate reductase 94.4 0.033 1.1E-06 50.0 4.5 32 63-94 4-35 (335)
408 2dpo_A L-gulonate 3-dehydrogen 94.4 0.029 9.8E-07 50.0 4.0 35 62-96 6-40 (319)
409 3k96_A Glycerol-3-phosphate de 94.4 0.035 1.2E-06 50.3 4.6 35 62-96 29-63 (356)
410 2hjr_A Malate dehydrogenase; m 94.3 0.043 1.5E-06 49.1 5.0 34 63-96 15-49 (328)
411 3l9w_A Glutathione-regulated p 94.2 0.031 1.1E-06 51.7 4.0 35 62-96 4-38 (413)
412 3g79_A NDP-N-acetyl-D-galactos 94.2 0.042 1.4E-06 51.7 4.8 34 63-96 19-54 (478)
413 1bg6_A N-(1-D-carboxylethyl)-L 94.2 0.036 1.2E-06 50.0 4.3 34 63-96 5-38 (359)
414 1pjc_A Protein (L-alanine dehy 94.2 0.042 1.4E-06 49.9 4.7 34 62-95 167-200 (361)
415 3l6d_A Putative oxidoreductase 94.2 0.05 1.7E-06 48.1 5.1 36 61-96 8-43 (306)
416 3g17_A Similar to 2-dehydropan 94.2 0.025 8.7E-07 49.7 3.1 33 63-95 3-35 (294)
417 3ego_A Probable 2-dehydropanto 94.2 0.041 1.4E-06 48.7 4.5 33 62-95 2-34 (307)
418 1pjq_A CYSG, siroheme synthase 94.2 0.037 1.3E-06 52.0 4.3 34 62-95 12-45 (457)
419 3qha_A Putative oxidoreductase 94.1 0.045 1.5E-06 48.1 4.6 35 62-96 15-49 (296)
420 3k6j_A Protein F01G10.3, confi 94.1 0.057 2E-06 50.5 5.4 36 61-96 53-88 (460)
421 3pid_A UDP-glucose 6-dehydroge 94.1 0.044 1.5E-06 50.8 4.6 34 62-96 36-69 (432)
422 1t2d_A LDH-P, L-lactate dehydr 94.1 0.055 1.9E-06 48.3 5.1 34 63-96 5-39 (322)
423 3ius_A Uncharacterized conserv 94.0 0.051 1.7E-06 47.2 4.8 35 62-96 5-39 (286)
424 3tl2_A Malate dehydrogenase; c 94.0 0.053 1.8E-06 48.2 4.9 33 62-94 8-41 (315)
425 2aef_A Calcium-gated potassium 94.0 0.035 1.2E-06 46.9 3.5 34 62-96 9-42 (234)
426 1ur5_A Malate dehydrogenase; o 94.0 0.052 1.8E-06 48.1 4.8 34 63-96 3-37 (309)
427 3g0o_A 3-hydroxyisobutyrate de 94.0 0.045 1.5E-06 48.3 4.3 35 62-96 7-41 (303)
428 1z82_A Glycerol-3-phosphate de 93.9 0.05 1.7E-06 48.8 4.6 35 61-95 13-47 (335)
429 2eez_A Alanine dehydrogenase; 93.9 0.051 1.8E-06 49.5 4.7 34 62-95 166-199 (369)
430 3dtt_A NADP oxidoreductase; st 93.9 0.047 1.6E-06 46.6 4.2 36 61-96 18-53 (245)
431 3axb_A Putative oxidoreductase 93.8 0.059 2E-06 50.2 5.1 60 284-344 181-263 (448)
432 2vhw_A Alanine dehydrogenase; 93.8 0.055 1.9E-06 49.4 4.7 36 61-96 167-202 (377)
433 4id9_A Short-chain dehydrogena 93.8 0.046 1.6E-06 49.0 4.1 39 58-96 15-54 (347)
434 1zcj_A Peroxisomal bifunctiona 93.8 0.061 2.1E-06 50.6 5.1 35 62-96 37-71 (463)
435 1mv8_A GMD, GDP-mannose 6-dehy 93.8 0.042 1.4E-06 51.3 3.9 32 64-95 2-33 (436)
436 2v6b_A L-LDH, L-lactate dehydr 93.8 0.055 1.9E-06 47.9 4.5 33 63-95 1-35 (304)
437 1zej_A HBD-9, 3-hydroxyacyl-CO 93.8 0.056 1.9E-06 47.5 4.5 35 61-96 11-45 (293)
438 4dgk_A Phytoene dehydrogenase; 93.8 0.094 3.2E-06 49.6 6.4 36 62-97 1-36 (501)
439 3gvi_A Malate dehydrogenase; N 93.7 0.066 2.3E-06 47.7 4.9 35 62-96 7-42 (324)
440 3pef_A 6-phosphogluconate dehy 93.7 0.063 2.2E-06 46.9 4.7 34 63-96 2-35 (287)
441 3orq_A N5-carboxyaminoimidazol 93.7 0.092 3.2E-06 47.9 5.9 36 61-96 11-46 (377)
442 2qyt_A 2-dehydropantoate 2-red 93.6 0.043 1.5E-06 48.6 3.5 31 63-93 9-45 (317)
443 2vns_A Metalloreductase steap3 93.6 0.059 2E-06 45.0 4.2 34 62-95 28-61 (215)
444 1dlj_A UDP-glucose dehydrogena 93.6 0.056 1.9E-06 49.9 4.3 31 64-95 2-32 (402)
445 4a7p_A UDP-glucose dehydrogena 93.6 0.068 2.3E-06 49.9 4.9 34 63-96 9-42 (446)
446 1y6j_A L-lactate dehydrogenase 93.5 0.067 2.3E-06 47.6 4.7 34 62-95 7-42 (318)
447 3ihm_A Styrene monooxygenase A 93.5 0.052 1.8E-06 50.5 4.1 33 231-277 23-55 (430)
448 4ezb_A Uncharacterized conserv 93.4 0.068 2.3E-06 47.5 4.6 34 62-95 24-58 (317)
449 1evy_A Glycerol-3-phosphate de 93.4 0.073 2.5E-06 48.3 4.8 32 64-95 17-48 (366)
450 2h78_A Hibadh, 3-hydroxyisobut 93.4 0.058 2E-06 47.5 4.0 35 62-96 3-37 (302)
451 3pqe_A L-LDH, L-lactate dehydr 93.3 0.077 2.6E-06 47.4 4.7 34 62-95 5-40 (326)
452 4huj_A Uncharacterized protein 93.3 0.046 1.6E-06 45.8 3.1 35 62-96 23-58 (220)
453 1nyt_A Shikimate 5-dehydrogena 93.3 0.08 2.7E-06 45.9 4.7 34 62-95 119-152 (271)
454 3hwr_A 2-dehydropantoate 2-red 93.3 0.062 2.1E-06 47.8 4.1 34 61-95 18-51 (318)
455 3e8x_A Putative NAD-dependent 93.3 0.076 2.6E-06 44.7 4.5 36 61-96 20-56 (236)
456 3gpi_A NAD-dependent epimerase 93.2 0.078 2.7E-06 46.0 4.6 35 62-96 3-37 (286)
457 3pdu_A 3-hydroxyisobutyrate de 93.2 0.062 2.1E-06 47.0 3.9 34 63-96 2-35 (287)
458 3ond_A Adenosylhomocysteinase; 93.2 0.071 2.4E-06 50.0 4.4 35 61-95 264-298 (488)
459 1ryi_A Glycine oxidase; flavop 93.2 0.059 2E-06 48.9 3.8 34 231-278 18-51 (382)
460 1guz_A Malate dehydrogenase; o 93.2 0.086 2.9E-06 46.7 4.7 33 64-96 2-36 (310)
461 3p7m_A Malate dehydrogenase; p 93.2 0.097 3.3E-06 46.6 5.1 35 62-96 5-40 (321)
462 3ggo_A Prephenate dehydrogenas 93.1 0.092 3.2E-06 46.6 4.8 35 62-96 33-69 (314)
463 1vpd_A Tartronate semialdehyde 93.0 0.068 2.3E-06 46.9 3.9 34 63-96 6-39 (299)
464 3hwr_A 2-dehydropantoate 2-red 93.0 0.21 7.3E-06 44.2 7.2 77 231-334 20-97 (318)
465 3ka7_A Oxidoreductase; structu 93.0 0.085 2.9E-06 48.6 4.7 32 232-277 2-33 (425)
466 2egg_A AROE, shikimate 5-dehyd 93.0 0.1 3.5E-06 46.0 4.9 34 62-95 141-175 (297)
467 3phh_A Shikimate dehydrogenase 93.0 0.1 3.5E-06 45.1 4.8 35 62-96 118-152 (269)
468 1jay_A Coenzyme F420H2:NADP+ o 93.0 0.096 3.3E-06 43.3 4.5 33 64-96 2-35 (212)
469 2q3e_A UDP-glucose 6-dehydroge 92.9 0.075 2.6E-06 50.0 4.1 33 63-95 6-40 (467)
470 3qsg_A NAD-binding phosphogluc 92.9 0.079 2.7E-06 47.0 4.1 33 62-94 24-57 (312)
471 3gvp_A Adenosylhomocysteinase 92.9 0.088 3E-06 48.5 4.4 35 61-95 219-253 (435)
472 3d4o_A Dipicolinate synthase s 92.9 0.096 3.3E-06 46.0 4.6 35 61-95 154-188 (293)
473 2g1u_A Hypothetical protein TM 92.9 0.13 4.3E-06 40.4 4.9 35 228-276 17-51 (155)
474 2uyy_A N-PAC protein; long-cha 92.9 0.12 4E-06 45.9 5.2 35 62-96 30-64 (316)
475 2iid_A L-amino-acid oxidase; f 92.9 0.1 3.6E-06 49.3 5.1 34 230-277 33-66 (498)
476 2rir_A Dipicolinate synthase, 92.8 0.096 3.3E-06 46.1 4.5 35 61-95 156-190 (300)
477 4e21_A 6-phosphogluconate dehy 92.8 0.09 3.1E-06 47.6 4.3 35 62-96 22-56 (358)
478 4aj2_A L-lactate dehydrogenase 92.8 0.11 3.7E-06 46.5 4.8 36 60-95 17-54 (331)
479 2i6t_A Ubiquitin-conjugating e 92.8 0.092 3.1E-06 46.4 4.3 34 62-95 14-49 (303)
480 3vku_A L-LDH, L-lactate dehydr 92.7 0.094 3.2E-06 46.8 4.3 35 61-95 8-44 (326)
481 3nrn_A Uncharacterized protein 92.7 0.27 9.1E-06 45.3 7.6 35 63-97 1-35 (421)
482 3d0o_A L-LDH 1, L-lactate dehy 92.7 0.095 3.3E-06 46.6 4.4 34 62-95 6-41 (317)
483 3fwz_A Inner membrane protein 92.7 0.21 7E-06 38.4 5.8 75 231-334 8-82 (140)
484 1txg_A Glycerol-3-phosphate de 92.7 0.085 2.9E-06 47.1 4.0 30 64-93 2-31 (335)
485 2pv7_A T-protein [includes: ch 92.6 0.15 5.3E-06 44.7 5.6 35 62-96 21-56 (298)
486 2we8_A Xanthine dehydrogenase; 92.6 0.12 4.1E-06 47.2 5.0 36 62-97 204-239 (386)
487 4hv4_A UDP-N-acetylmuramate--L 92.6 0.11 3.7E-06 49.3 4.9 78 227-340 19-99 (494)
488 3ego_A Probable 2-dehydropanto 92.6 0.19 6.5E-06 44.4 6.1 74 232-333 4-77 (307)
489 1a5z_A L-lactate dehydrogenase 92.6 0.094 3.2E-06 46.7 4.1 33 63-95 1-35 (319)
490 3c24_A Putative oxidoreductase 92.5 0.14 4.8E-06 44.6 5.1 34 63-96 12-46 (286)
491 2zqz_A L-LDH, L-lactate dehydr 92.5 0.11 3.7E-06 46.4 4.5 35 61-95 8-44 (326)
492 3q2o_A Phosphoribosylaminoimid 92.5 0.14 4.9E-06 46.8 5.4 36 61-96 13-48 (389)
493 3ldh_A Lactate dehydrogenase; 92.5 0.16 5.4E-06 45.3 5.5 36 61-96 20-57 (330)
494 2izz_A Pyrroline-5-carboxylate 92.4 0.11 3.8E-06 46.2 4.4 34 62-95 22-59 (322)
495 1hdo_A Biliverdin IX beta redu 92.4 0.14 4.9E-06 41.6 4.9 33 63-95 4-37 (206)
496 4gde_A UDP-galactopyranose mut 92.4 0.11 3.6E-06 49.2 4.6 32 232-277 12-44 (513)
497 3ew7_A LMO0794 protein; Q8Y8U8 92.4 0.12 4.3E-06 42.6 4.5 32 64-95 2-34 (221)
498 3cky_A 2-hydroxymethyl glutara 92.4 0.098 3.3E-06 45.9 4.0 35 62-96 4-38 (301)
499 3cgv_A Geranylgeranyl reductas 92.4 0.094 3.2E-06 47.7 4.0 91 232-336 6-163 (397)
500 3c7a_A Octopine dehydrogenase; 92.4 0.094 3.2E-06 48.2 4.0 30 63-92 3-33 (404)
No 1
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=100.00 E-value=7.6e-39 Score=308.05 Aligned_cols=289 Identities=35% Similarity=0.650 Sum_probs=236.9
Q ss_pred CCCCcEEEECCchhHHHHHHhhhccCceEEEEcCCCccccchhhhhhhcccccccccccchhccchhhhcCCCeEEEEEE
Q 018704 60 NEKPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRNHMVFTPLLASTCVGTLEFRSVAEPIARIQPAISREPGSYFFLSH 139 (351)
Q Consensus 60 ~~~~~VvIIG~G~aGl~aA~~L~~~g~~v~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 139 (351)
..+++|||||||+||+++|..|++.+++|+|||+++++.|.|+++....|..+......++.+.. .....++.++.++
T Consensus 40 ~~KprVVIIGgG~AGl~~A~~L~~~~~~VtLId~~~~~~~~PlL~~va~G~l~~~~i~~p~~~~~--~~~~~~v~~~~~~ 117 (502)
T 4g6h_A 40 SDKPNVLILGSGWGAISFLKHIDTKKYNVSIISPRSYFLFTPLLPSAPVGTVDEKSIIEPIVNFA--LKKKGNVTYYEAE 117 (502)
T ss_dssp CSSCEEEEECSSHHHHHHHHHSCTTTCEEEEEESSSEEECGGGGGGTTTTSSCGGGGEEEHHHHH--TTCSSCEEEEEEE
T ss_pred CCCCCEEEECCcHHHHHHHHHhhhCCCcEEEECCCCCcccccchhHHhhccccHHHhhhhHHHHH--HhhcCCeEEEEEE
Confidence 34579999999999999999999999999999999999999999998888877776655555442 2344578999999
Q ss_pred eeeEeCCCCEEEEEeecC---------ccccCCCceeEeeccEEEEecCCCcCCCCCCCccccccccCCHHHHHHHHHHH
Q 018704 140 CAGIDTDNHVVHCETVTD---------ELRTLEPWKFKISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKL 210 (351)
Q Consensus 140 v~~i~~~~~~v~~~~~~~---------~~~~~~~~~~~~~~d~lviAtG~~p~~p~i~g~~~~~~~~~~~~~~~~~~~~~ 210 (351)
|++||++.+.+.+..... .......+..++.||+||||||+.|+++++||++++++.++++.++..+++.+
T Consensus 118 v~~ID~~~k~V~l~~~~~~~~~~~~~~~~~~~~~~~~~i~YD~LViAtGs~~~~~~ipG~~e~a~~l~t~~dA~~ir~~l 197 (502)
T 4g6h_A 118 ATSINPDRNTVTIKSLSAVSQLYQPENHLGLHQAEPAEIKYDYLISAVGAEPNTFGIPGVTDYGHFLKEIPNSLEIRRTF 197 (502)
T ss_dssp EEEEEGGGTEEEEEEEEEEEECSSSCCCCCCCTTCCEEEECSEEEECCCCEECCTTCTTHHHHCEECSSHHHHHHHHHHH
T ss_pred EEEEEhhhCEEEEeecccceeecccccccccccCCceEEeCCEEEEcCCcccccCCccCcccccCCCCCHHHHHHHHHHH
Confidence 999999999998764211 00001112348999999999999999999999989999999999999999998
Q ss_pred HHhhhccCCCCCCHhhhcccCeEEEECCChHHHHHHHHHHHHHHHHHHhhhcCCCCccEEEEEeCC-CCCCCCcHHHHHH
Q 018704 211 LLNLMLSDVPGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN-EILSSFDDRLRHY 289 (351)
Q Consensus 211 ~~~~~~~~~p~~~~~~~~~~~~v~VvGgG~~a~e~a~~l~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~l~~~~~~~~~~ 289 (351)
..++.....+....+++...++++|||||++|+|+|.+|.+++...+...|+......+|+++++. .+++.+++++.+.
T Consensus 198 ~~~~e~a~~~~~~~~~~~~~~~vvVvGgG~tGvE~A~~l~~~~~~~l~~~~~~~~~~~~V~lve~~~~il~~~~~~~~~~ 277 (502)
T 4g6h_A 198 AANLEKANLLPKGDPERRRLLSIVVVGGGPTGVEAAGELQDYVHQDLRKFLPALAEEVQIHLVEALPIVLNMFEKKLSSY 277 (502)
T ss_dssp HHHHHHHHHSCTTCHHHHHHTEEEEECCSHHHHHHHHHHHHHHHHTHHHHCHHHHHHCEEEEECSSSSSSTTSCHHHHHH
T ss_pred HHHHHHHhcccccchhhccccceEEECCCcchhhhHHHHHHHHHHHHHhhcccccccceeEEeccccccccCCCHHHHHH
Confidence 777766665554445666678999999999999999999999887777777776677899999997 5889999999999
Q ss_pred HHHHhhhcCcEEEcCe-EEEEeCCeEEe----cCCc----EEeccEEEEecCCCCcccc----ccCCCCCCCCC
Q 018704 290 ATTQLSKSGVRLVRGI-VKDVDSQKLIL----NDGT----EVPYGLLVWSTGVGPSTLV----KSLDLPKSPGG 350 (351)
Q Consensus 290 ~~~~l~~~gV~~~~~~-v~~v~~~~v~~----~~g~----~~~~D~vi~a~G~~p~~~~----~~~gl~~~~~G 350 (351)
+.+.|++.||+++++. |++++++++.+ .||+ ++++|.||||+|.+|++++ ..++++.+++|
T Consensus 278 ~~~~L~~~GV~v~~~~~v~~v~~~~~~~~~~~~dg~~~~~~i~ad~viwa~Gv~~~~~~~~l~~~~~~~~~~~g 351 (502)
T 4g6h_A 278 AQSHLENTSIKVHLRTAVAKVEEKQLLAKTKHEDGKITEETIPYGTLIWATGNKARPVITDLFKKIPEQNSSKR 351 (502)
T ss_dssp HHHHHHHTTCEEETTEEEEEECSSEEEEEEECTTSCEEEEEEECSEEEECCCEECCHHHHHHHHHSGGGTTCCS
T ss_pred HHHHHHhcceeeecCceEEEEeCCceEEEEEecCcccceeeeccCEEEEccCCcCCHHHHhHHHhccccccCCC
Confidence 9999999999999995 99999987765 3553 5999999999999998544 34455555544
No 2
>4eqs_A Coenzyme A disulfide reductase; oxidoreductase; HET: COA FAD; 1.50A {Staphylococcus aureus subsp} PDB: 1yqz_A* 4eqw_A* 4em4_A* 4em3_A* 4eqr_A* 4emw_A* 4eqx_A*
Probab=100.00 E-value=5.7e-34 Score=270.18 Aligned_cols=250 Identities=19% Similarity=0.283 Sum_probs=200.1
Q ss_pred CcEEEECCchhHHHHHHhhhccC--ceEEEEcCCCccccc-hhhhhhhcccccccccccchhccchhhhcCCCeEEEE-E
Q 018704 63 PRVVVLGSGWAGCRLMKGIDTSL--YDVVCVSPRNHMVFT-PLLASTCVGTLEFRSVAEPIARIQPAISREPGSYFFL-S 138 (351)
Q Consensus 63 ~~VvIIG~G~aGl~aA~~L~~~g--~~v~vie~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 138 (351)
++||||||||||++||.+|++.| .+|+|||+++.+.|. +.++....+...... ..+......+....++.++. .
T Consensus 1 PKVvIIG~G~AGl~aA~~l~~~g~~~~V~lie~~~~~~~~~~~l~~~~~~~~~~~~--~~~~~~~~~~~~~~~i~~~~~~ 78 (437)
T 4eqs_A 1 PKIVVVGAVAGGATCASQIRRLDKESDIIIFEKDRDMSFANCALPYVIGEVVEDRR--YALAYTPEKFYDRKQITVKTYH 78 (437)
T ss_dssp CCEEEECCSTTHHHHHHHHHHHCSSSCEEEEESSSCSSBCGGGHHHHHTTSSCCGG--GTBCCCHHHHHHHHCCEEEETE
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCCCcEEEEeCCCCCCCCcchhHHHHcCCccchh--hhhhcCHHHHHHhcCCEEEeCC
Confidence 47999999999999999999977 569999999887765 334433322222111 11111111223334566544 5
Q ss_pred EeeeEeCCCCEEEEEeecCccccCCCceeEeeccEEEEecCCCcCCCCCCCccccccccCCHHHHHHHHHHHHHhhhccC
Q 018704 139 HCAGIDTDNHVVHCETVTDELRTLEPWKFKISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSD 218 (351)
Q Consensus 139 ~v~~i~~~~~~v~~~~~~~~~~~~~~~~~~~~~d~lviAtG~~p~~p~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 218 (351)
+|+.+|.+.+.+.+.....++ ..++.||+||||||+.|+.|++|| +..+..+++.++..+++.+..
T Consensus 79 ~V~~id~~~~~~~~~~~~~~~------~~~~~yd~lVIATGs~p~~p~i~g--~~~~~~~~~~~~~~l~~~~~~------ 144 (437)
T 4eqs_A 79 EVIAINDERQTVSVLNRKTNE------QFEESYDKLILSPGASANSLGFES--DITFTLRNLEDTDAIDQFIKA------ 144 (437)
T ss_dssp EEEEEETTTTEEEEEETTTTE------EEEEECSEEEECCCEEECCCCCCC--TTEECCSSHHHHHHHHHHHHH------
T ss_pred eEEEEEccCcEEEEEeccCCc------eEEEEcCEEEECCCCccccccccC--ceEEeeccHHHHHHHHHhhhc------
Confidence 899999999998876544333 347999999999999999999998 566778888888888776532
Q ss_pred CCCCCHhhhcccCeEEEECCChHHHHHHHHHHHHHHHHHHhhhcCCCCccEEEEEeCC-CCCCCCcHHHHHHHHHHhhhc
Q 018704 219 VPGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN-EILSSFDDRLRHYATTQLSKS 297 (351)
Q Consensus 219 ~p~~~~~~~~~~~~v~VvGgG~~a~e~a~~l~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~l~~~~~~~~~~~~~~l~~~ 297 (351)
...++++|||||++|+|+|..+.+++ .+|+++++. ++++.+++++.+.+.+.+++.
T Consensus 145 ---------~~~~~vvViGgG~ig~E~A~~l~~~g--------------~~Vtlv~~~~~ll~~~d~~~~~~~~~~l~~~ 201 (437)
T 4eqs_A 145 ---------NQVDKVLVVGAGYVSLEVLENLYERG--------------LHPTLIHRSDKINKLMDADMNQPILDELDKR 201 (437)
T ss_dssp ---------HTCCEEEEECCSHHHHHHHHHHHHHT--------------CEEEEEESSSCCSTTSCGGGGHHHHHHHHHT
T ss_pred ---------cCCcEEEEECCccchhhhHHHHHhcC--------------CcceeeeeeccccccccchhHHHHHHHhhcc
Confidence 33469999999999999999999988 899999997 578889999999999999999
Q ss_pred CcEEEcCe-EEEEeCCeEEecCCcEEeccEEEEecCCCCc-cccccCCCCCCCCCC
Q 018704 298 GVRLVRGI-VKDVDSQKLILNDGTEVPYGLLVWSTGVGPS-TLVKSLDLPKSPGGR 351 (351)
Q Consensus 298 gV~~~~~~-v~~v~~~~v~~~~g~~~~~D~vi~a~G~~p~-~~~~~~gl~~~~~G~ 351 (351)
||+++.+. |++++++.+.+++|+++++|.|++|+|++|+ ++++..|+++|++|.
T Consensus 202 gV~i~~~~~v~~~~~~~v~~~~g~~~~~D~vl~a~G~~Pn~~~~~~~gl~~~~~G~ 257 (437)
T 4eqs_A 202 EIPYRLNEEINAINGNEITFKSGKVEHYDMIIEGVGTHPNSKFIESSNIKLDRKGF 257 (437)
T ss_dssp TCCEEESCCEEEEETTEEEETTSCEEECSEEEECCCEEESCGGGTTSSCCCCTTSC
T ss_pred ceEEEeccEEEEecCCeeeecCCeEEeeeeEEEEeceecCcHHHHhhhhhhccCCc
Confidence 99999995 9999999999999999999999999999999 899999999988773
No 3
>1xhc_A NADH oxidase /nitrite reductase; southe collaboratory for structural genomics, secsg, hyperthermoph protein structure initiative, PSI; HET: FAD; 2.35A {Pyrococcus furiosus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=100.00 E-value=2e-33 Score=260.66 Aligned_cols=235 Identities=24% Similarity=0.392 Sum_probs=190.3
Q ss_pred CCcEEEECCchhHHHHHHhhhccCceEEEEcCCCccccc-hhhhhhhcccccccccccchhccchhhhcCCCeEEEEE-E
Q 018704 62 KPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRNHMVFT-PLLASTCVGTLEFRSVAEPIARIQPAISREPGSYFFLS-H 139 (351)
Q Consensus 62 ~~~VvIIG~G~aGl~aA~~L~~~g~~v~vie~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 139 (351)
..||+|||||+||++||..|++.| +|+|||+++...|. +.+.....+...+..+..... .+....++.++.. +
T Consensus 8 ~~~vvIIGgG~AGl~aA~~l~~~g-~V~lie~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~----~~~~~~~v~~~~g~~ 82 (367)
T 1xhc_A 8 GSKVVIVGNGPGGFELAKQLSQTY-EVTVIDKEPVPYYSKPMLSHYIAGFIPRNRLFPYSL----DWYRKRGIEIRLAEE 82 (367)
T ss_dssp -CEEEEECCSHHHHHHHHHHTTTS-EEEEECSSSSCCCCSTTHHHHHTTSSCGGGGCSSCH----HHHHHHTEEEECSCC
T ss_pred CCcEEEECCcHHHHHHHHHHhhcC-CEEEEECCCCCccccchhHHHHhCCCCHHHhccCCH----HHHHhCCcEEEECCE
Confidence 369999999999999999999999 99999999876553 445444434333332222211 1223347787776 6
Q ss_pred eeeEeCCCCEEEEEeecCccccCCCceeEeeccEEEEecCCCcCCCCCCCccccccccCCHHHHHHHHHHHHHhhhccCC
Q 018704 140 CAGIDTDNHVVHCETVTDELRTLEPWKFKISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDV 219 (351)
Q Consensus 140 v~~i~~~~~~v~~~~~~~~~~~~~~~~~~~~~d~lviAtG~~p~~p~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 219 (351)
|+.+++..+.+. .++. ++.||+||||||+.|+.|++||. ++++++++..++..+++.+.
T Consensus 83 v~~id~~~~~V~----~~g~--------~~~~d~lViATGs~p~~p~i~G~-~~v~~~~~~~~~~~l~~~~~-------- 141 (367)
T 1xhc_A 83 AKLIDRGRKVVI----TEKG--------EVPYDTLVLATGARAREPQIKGK-EYLLTLRTIFDADRIKESIE-------- 141 (367)
T ss_dssp EEEEETTTTEEE----ESSC--------EEECSEEEECCCEEECCCCSBTG-GGEECCCSHHHHHHHHHHHH--------
T ss_pred EEEEECCCCEEE----ECCc--------EEECCEEEECCCCCCCCCCCCCc-CCEEEEcCHHHHHHHHHHhh--------
Confidence 999999887765 2455 89999999999999999999994 67778888888888776542
Q ss_pred CCCCHhhhcccCeEEEECCChHHHHHHHHHHHHHHHHHHhhhcCCCCccEEEEEeCC-CCCCCCcHHHHHHHHHHhhhcC
Q 018704 220 PGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN-EILSSFDDRLRHYATTQLSKSG 298 (351)
Q Consensus 220 p~~~~~~~~~~~~v~VvGgG~~a~e~a~~l~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~l~~~~~~~~~~~~~~l~~~g 298 (351)
..++++|||||.+|+|+|..|.+++ .+|+++++. .+++ +++++.+.+.+.+++.|
T Consensus 142 ---------~~~~vvViGgG~~g~E~A~~l~~~g--------------~~Vtlv~~~~~~l~-~~~~~~~~l~~~l~~~g 197 (367)
T 1xhc_A 142 ---------NSGEAIIIGGGFIGLELAGNLAEAG--------------YHVKLIHRGAMFLG-LDEELSNMIKDMLEETG 197 (367)
T ss_dssp ---------HHSEEEEEECSHHHHHHHHHHHHTT--------------CEEEEECSSSCCTT-CCHHHHHHHHHHHHHTT
T ss_pred ---------cCCcEEEECCCHHHHHHHHHHHhCC--------------CEEEEEeCCCeecc-CCHHHHHHHHHHHHHCC
Confidence 2359999999999999999999887 899999997 4667 99999999999999999
Q ss_pred cEEEcCe-EEEEeCCeEEecCCcEEeccEEEEecCCCCc-cccccCCCCCC
Q 018704 299 VRLVRGI-VKDVDSQKLILNDGTEVPYGLLVWSTGVGPS-TLVKSLDLPKS 347 (351)
Q Consensus 299 V~~~~~~-v~~v~~~~v~~~~g~~~~~D~vi~a~G~~p~-~~~~~~gl~~~ 347 (351)
|+++++. |++++.+++++++|+ +++|.||+|+|++|+ ++++.+|++.+
T Consensus 198 V~i~~~~~v~~i~~~~v~~~~g~-i~~D~vi~a~G~~p~~~ll~~~gl~~~ 247 (367)
T 1xhc_A 198 VKFFLNSELLEANEEGVLTNSGF-IEGKVKICAIGIVPNVDLARRSGIHTG 247 (367)
T ss_dssp EEEECSCCEEEECSSEEEETTEE-EECSCEEEECCEEECCHHHHHTTCCBS
T ss_pred CEEEcCCEEEEEEeeEEEECCCE-EEcCEEEECcCCCcCHHHHHhCCCCCC
Confidence 9999995 999988889999988 999999999999999 78888888764
No 4
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A*
Probab=100.00 E-value=3.5e-33 Score=262.96 Aligned_cols=238 Identities=21% Similarity=0.355 Sum_probs=194.2
Q ss_pred CcEEEECCchhHHHHHHhhhccCce--EEEEcCCCccccc-hhh-hhhhcccccccccccchhccchhhhcCCCeEEEEE
Q 018704 63 PRVVVLGSGWAGCRLMKGIDTSLYD--VVCVSPRNHMVFT-PLL-ASTCVGTLEFRSVAEPIARIQPAISREPGSYFFLS 138 (351)
Q Consensus 63 ~~VvIIG~G~aGl~aA~~L~~~g~~--v~vie~~~~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 138 (351)
++|+|||||+||++||..|++.|++ |+|||+++.+.|. +.+ .....+......+ ... ..+....++.++..
T Consensus 3 ~~vvIIGaG~AGl~aA~~L~~~g~~~~V~li~~~~~~~y~~~~l~~~~~~g~~~~~~~-~~~----~~~~~~~~i~~~~~ 77 (410)
T 3ef6_A 3 THVAIIGNGVGGFTTAQALRAEGFEGRISLIGDEPHLPYDRPSLSKAVLDGSLERPPI-LAE----ADWYGEARIDMLTG 77 (410)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCSEEEEEECSSSSSBCSGGGGTHHHHTSSSSCCB-SSC----TTHHHHTTCEEEES
T ss_pred CCEEEEcccHHHHHHHHHHHccCcCCeEEEEECCCCCCcCCccccHHHhCCCCCHHHh-cCC----HHHHHHCCCEEEeC
Confidence 5899999999999999999999987 9999999988775 333 2233333333322 111 11223347888777
Q ss_pred -EeeeEeCCCCEEEEEeecCccccCCCceeEeeccEEEEecCCCcCCCCCCCcc-ccccccCCHHHHHHHHHHHHHhhhc
Q 018704 139 -HCAGIDTDNHVVHCETVTDELRTLEPWKFKISYDKLVIALGAEASTFGIHGVK-ENATFLREVHHAQEIRRKLLLNLML 216 (351)
Q Consensus 139 -~v~~i~~~~~~v~~~~~~~~~~~~~~~~~~~~~d~lviAtG~~p~~p~i~g~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 216 (351)
+|+.++...+.+.+ .++. .+.||+||+|||+.|+.|++||.+ ++++++++..++..+++.+
T Consensus 78 ~~v~~id~~~~~v~~---~~g~--------~~~~d~lvlAtG~~p~~~~ipG~~~~~v~~~~~~~d~~~l~~~~------ 140 (410)
T 3ef6_A 78 PEVTALDVQTRTISL---DDGT--------TLSADAIVIATGSRARTMALPGSQLPGVVTLRTYGDVQVLRDSW------ 140 (410)
T ss_dssp CCEEEEETTTTEEEE---TTSC--------EEECSEEEECCCEEECCCCCTTTTSTTEECCCSHHHHHHHHHHC------
T ss_pred CEEEEEECCCCEEEE---CCCC--------EEECCEEEEccCCcccCCCCCCccccceEEeccHHHHHHHHHHh------
Confidence 99999999998876 4565 899999999999999999999986 5677788888888877653
Q ss_pred cCCCCCCHhhhcccCeEEEECCChHHHHHHHHHHHHHHHHHHhhhcCCCCccEEEEEeCCC-CCC-CCcHHHHHHHHHHh
Q 018704 217 SDVPGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANE-ILS-SFDDRLRHYATTQL 294 (351)
Q Consensus 217 ~~~p~~~~~~~~~~~~v~VvGgG~~a~e~a~~l~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~l~-~~~~~~~~~~~~~l 294 (351)
...++++|||+|.+|+|+|..+.+++ .+|+++++.+ +++ .+++.+.+.+.+.+
T Consensus 141 -----------~~~~~vvViGgG~~g~E~A~~l~~~g--------------~~Vtvv~~~~~~l~~~~~~~~~~~l~~~l 195 (410)
T 3ef6_A 141 -----------TSATRLLIVGGGLIGCEVATTARKLG--------------LSVTILEAGDELLVRVLGRRIGAWLRGLL 195 (410)
T ss_dssp -----------CTTCEEEEECCSHHHHHHHHHHHHTT--------------CEEEEECSSSSSSHHHHCHHHHHHHHHHH
T ss_pred -----------ccCCeEEEECCCHHHHHHHHHHHhCC--------------CeEEEEecCCccchhhcCHHHHHHHHHHH
Confidence 34569999999999999999999877 8999999974 443 37888999999999
Q ss_pred hhcCcEEEcCe-EEEEeCC----eEEecCCcEEeccEEEEecCCCCc-cccccCCCCCC
Q 018704 295 SKSGVRLVRGI-VKDVDSQ----KLILNDGTEVPYGLLVWSTGVGPS-TLVKSLDLPKS 347 (351)
Q Consensus 295 ~~~gV~~~~~~-v~~v~~~----~v~~~~g~~~~~D~vi~a~G~~p~-~~~~~~gl~~~ 347 (351)
++.||+++++. |++++.+ +|+++||++++||.||+|+|++|+ ++++.+|++++
T Consensus 196 ~~~GV~i~~~~~v~~i~~~~~~~~v~~~dg~~i~aD~Vv~a~G~~p~~~l~~~~gl~~~ 254 (410)
T 3ef6_A 196 TELGVQVELGTGVVGFSGEGQLEQVMASDGRSFVADSALICVGAEPADQLARQAGLACD 254 (410)
T ss_dssp HHHTCEEECSCCEEEEECSSSCCEEEETTSCEEECSEEEECSCEEECCHHHHHTTCCBS
T ss_pred HHCCCEEEeCCEEEEEeccCcEEEEEECCCCEEEcCEEEEeeCCeecHHHHHhCCCccC
Confidence 99999999995 9999865 689999999999999999999999 79999888875
No 5
>3klj_A NAD(FAD)-dependent dehydrogenase, NIRB-family (N- domain); FAD-binding protein, GR-fold, oxidoreductase; HET: FAD; 2.10A {Clostridium acetobutylicum}
Probab=100.00 E-value=1.1e-33 Score=263.80 Aligned_cols=231 Identities=18% Similarity=0.280 Sum_probs=190.6
Q ss_pred CCCcEEEECCchhHHHHHHhhhccCceEEEEcCCCcccc-chhhhhhhcccccccccccchhccchhhhcCCCeEEEEE-
Q 018704 61 EKPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRNHMVF-TPLLASTCVGTLEFRSVAEPIARIQPAISREPGSYFFLS- 138 (351)
Q Consensus 61 ~~~~VvIIG~G~aGl~aA~~L~~~g~~v~vie~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 138 (351)
+.++|+|||||+||++||..|++.+.+|+|||+++++.| .+.++....+......+.....+ +....++.++..
T Consensus 8 ~~~~~vIvGgG~AGl~aA~~L~~~~~~itlie~~~~~~y~~~~l~~~l~g~~~~~~l~~~~~~----~~~~~~i~~~~~~ 83 (385)
T 3klj_A 8 KSTKILILGAGPAGFSAAKAALGKCDDITMINSEKYLPYYRPRLNEIIAKNKSIDDILIKKND----WYEKNNIKVITSE 83 (385)
T ss_dssp CBCSEEEECCSHHHHHHHHHHTTTCSCEEEECSSSSCCBCGGGHHHHHHSCCCGGGTBSSCHH----HHHHTTCEEECSC
T ss_pred CCCCEEEEcCcHHHHHHHHHHhCCCCEEEEEECCCCCCcccChhhHHHcCCCCHHHccCCCHH----HHHHCCCEEEeCC
Confidence 457999999999999999999889999999999998876 56666655554443333222222 223347777654
Q ss_pred EeeeEeCCCCEEEEEeecCccccCCCceeEeeccEEEEecCCCcCCCCCCCccccccccCCHHHHHHHHHHHHHhhhccC
Q 018704 139 HCAGIDTDNHVVHCETVTDELRTLEPWKFKISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSD 218 (351)
Q Consensus 139 ~v~~i~~~~~~v~~~~~~~~~~~~~~~~~~~~~d~lviAtG~~p~~p~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 218 (351)
+|+.+|++.+.+.+ .+++ ++.||+||||||+.|+.|++||.+ +++++++.+++..+++.+.
T Consensus 84 ~V~~id~~~~~v~~---~~g~--------~~~yd~lvlAtG~~p~~p~i~G~~-~v~~~~~~~d~~~l~~~l~------- 144 (385)
T 3klj_A 84 FATSIDPNNKLVTL---KSGE--------KIKYEKLIIASGSIANKIKVPHAD-EIFSLYSYDDALKIKDECK------- 144 (385)
T ss_dssp CEEEEETTTTEEEE---TTSC--------EEECSEEEECCCEEECCCCCTTCS-CEECCSSHHHHHHHHHHHH-------
T ss_pred EEEEEECCCCEEEE---CCCC--------EEECCEEEEecCCCcCCCCCCCCC-CeEEeCCHHHHHHHHHHhh-------
Confidence 89999999998876 4566 899999999999999999999986 7888899999988887652
Q ss_pred CCCCCHhhhcccCeEEEECCChHHHHHHHHHHHHHHHHHHhhhcCCCCccEEEEEeCCC-CCCC-CcHHHHHHHHHHhhh
Q 018704 219 VPGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANE-ILSS-FDDRLRHYATTQLSK 296 (351)
Q Consensus 219 ~p~~~~~~~~~~~~v~VvGgG~~a~e~a~~l~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~l~~-~~~~~~~~~~~~l~~ 296 (351)
.+++++|||||.+|+|+|..|.+.+ .+|+++++.+ +++. +++.+.+.+.+.+++
T Consensus 145 ----------~~~~vvVIGgG~~g~E~A~~l~~~g--------------~~Vtvv~~~~~~l~~~~~~~~~~~~~~~l~~ 200 (385)
T 3klj_A 145 ----------NKGKAFIIGGGILGIELAQAIIDSG--------------TPASIGIILEYPLERQLDRDGGLFLKDKLDR 200 (385)
T ss_dssp ----------HHSCEEEECCSHHHHHHHHHHHHHT--------------CCEEEECSSSSSCTTTSCHHHHHHHHHHHHT
T ss_pred ----------cCCeEEEECCCHHHHHHHHHHHhCC--------------CeEEEEEcCCccchhhcCHHHHHHHHHHHHh
Confidence 3469999999999999999999887 8999999974 5554 899999999999999
Q ss_pred cCcEEEcCe-EEEEeCCeEEecCCcEEeccEEEEecCCCCc-cccccCCCCCC
Q 018704 297 SGVRLVRGI-VKDVDSQKLILNDGTEVPYGLLVWSTGVGPS-TLVKSLDLPKS 347 (351)
Q Consensus 297 ~gV~~~~~~-v~~v~~~~v~~~~g~~~~~D~vi~a~G~~p~-~~~~~~gl~~~ 347 (351)
.||+++.+. |+++ |+++++|.||+|+|++|+ ++++.+|++.+
T Consensus 201 ~gV~~~~~~~v~~i---------g~~~~~D~vv~a~G~~p~~~~~~~~gl~~~ 244 (385)
T 3klj_A 201 LGIKIYTNSNFEEM---------GDLIRSSCVITAVGVKPNLDFIKDTEIASK 244 (385)
T ss_dssp TTCEEECSCCGGGC---------HHHHHHSEEEECCCEEECCGGGTTSCCCBS
T ss_pred CCCEEEeCCEEEEc---------CeEEecCeEEECcCcccChhhhhhcCCCcC
Confidence 999999994 7665 678999999999999999 89999888765
No 6
>3lxd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutathione reductase (GR)-like ONFR; HET: FAD; 2.50A {Novosphingobium aromaticivorans}
Probab=100.00 E-value=2.2e-32 Score=258.01 Aligned_cols=241 Identities=21% Similarity=0.369 Sum_probs=194.3
Q ss_pred CCCcEEEECCchhHHHHHHhhhccCce--EEEEcCCCccccc-hhhh-hhhcccccccccccchhccchhhhcCCCeEEE
Q 018704 61 EKPRVVVLGSGWAGCRLMKGIDTSLYD--VVCVSPRNHMVFT-PLLA-STCVGTLEFRSVAEPIARIQPAISREPGSYFF 136 (351)
Q Consensus 61 ~~~~VvIIG~G~aGl~aA~~L~~~g~~--v~vie~~~~~~~~-~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 136 (351)
+++||||||||+||++||..|++.|++ |+|||+++...|. +.+. ....+......+.. ....+....++.++
T Consensus 8 ~~~~vvIIGaG~aGl~aA~~L~~~g~~~~V~lie~~~~~~y~~~~l~~~~~~~~~~~~~~~~----~~~~~~~~~~i~~~ 83 (415)
T 3lxd_A 8 ERADVVIVGAGHGGAQAAIALRQNGFEGRVLVIGREPEIPYERPPLSKEYLAREKTFERICI----RPAQFWEDKAVEMK 83 (415)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCSCEEEEESSSSCCBCSGGGGTTTTTTSSCSGGGBS----SCHHHHHHTTEEEE
T ss_pred CCCcEEEECChHHHHHHHHHHHccCcCCCEEEEecCCCCCcCcccCCHHHHcCCCCHHHhcc----CCHHHHHHCCcEEE
Confidence 457999999999999999999999987 9999999987765 2222 22222222222211 11222334578887
Q ss_pred EE-EeeeEeCCCCEEEEEeecCccccCCCceeEeeccEEEEecCCCcCCCCCCCcc-ccccccCCHHHHHHHHHHHHHhh
Q 018704 137 LS-HCAGIDTDNHVVHCETVTDELRTLEPWKFKISYDKLVIALGAEASTFGIHGVK-ENATFLREVHHAQEIRRKLLLNL 214 (351)
Q Consensus 137 ~~-~v~~i~~~~~~v~~~~~~~~~~~~~~~~~~~~~d~lviAtG~~p~~p~i~g~~-~~~~~~~~~~~~~~~~~~~~~~~ 214 (351)
.. +|+.++...+.+.+ .++. .+.||+||+|||+.|+.|++||.+ +.++++++..++..+...+.
T Consensus 84 ~~~~v~~id~~~~~v~~---~~g~--------~~~~d~lvlAtG~~~~~~~i~g~~~~~v~~~~~~~d~~~l~~~~~--- 149 (415)
T 3lxd_A 84 LGAEVVSLDPAAHTVKL---GDGS--------AIEYGKLIWATGGDPRRLSCVGADLAGVHAVRTKEDADRLMAELD--- 149 (415)
T ss_dssp ETCCEEEEETTTTEEEE---TTSC--------EEEEEEEEECCCEECCCCBTTSSCCBTEECCCSHHHHHHHHHHHH---
T ss_pred eCCEEEEEECCCCEEEE---CCCC--------EEEeeEEEEccCCccCCCCCCCccccCEEEEcCHHHHHHHHHHhh---
Confidence 76 89999999998876 4565 899999999999999999999986 56777888888888877652
Q ss_pred hccCCCCCCHhhhcc-cCeEEEECCChHHHHHHHHHHHHHHHHHHhhhcCCCCccEEEEEeCCC-CCC-CCcHHHHHHHH
Q 018704 215 MLSDVPGISEEEKSR-LLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANE-ILS-SFDDRLRHYAT 291 (351)
Q Consensus 215 ~~~~~p~~~~~~~~~-~~~v~VvGgG~~a~e~a~~l~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~l~-~~~~~~~~~~~ 291 (351)
. .++++|||+|.+|+|+|..+.+++ .+|+++++.+ +++ .+++.+.+.+.
T Consensus 150 --------------~~~~~vvViGgG~~g~e~A~~l~~~g--------------~~Vtvv~~~~~~l~~~~~~~~~~~l~ 201 (415)
T 3lxd_A 150 --------------AGAKNAVVIGGGYIGLEAAAVLTKFG--------------VNVTLLEALPRVLARVAGEALSEFYQ 201 (415)
T ss_dssp --------------TTCCEEEEECCSHHHHHHHHHHHHTT--------------CEEEEEESSSSTTTTTSCHHHHHHHH
T ss_pred --------------hcCCeEEEECCCHHHHHHHHHHHhcC--------------CeEEEEecCCchhhhhcCHHHHHHHH
Confidence 2 569999999999999999999877 8999999974 444 47899999999
Q ss_pred HHhhhcCcEEEcCe-EEEEeCC-----eEEecCCcEEeccEEEEecCCCCc-cccccCCCCCC
Q 018704 292 TQLSKSGVRLVRGI-VKDVDSQ-----KLILNDGTEVPYGLLVWSTGVGPS-TLVKSLDLPKS 347 (351)
Q Consensus 292 ~~l~~~gV~~~~~~-v~~v~~~-----~v~~~~g~~~~~D~vi~a~G~~p~-~~~~~~gl~~~ 347 (351)
+.+++.||+++++. |++++.+ +|.+.+|++++||.||+|+|++|+ ++++.+|++.+
T Consensus 202 ~~l~~~GV~i~~~~~v~~i~~~~~~v~~v~l~dG~~i~aD~Vv~a~G~~p~~~l~~~~gl~~~ 264 (415)
T 3lxd_A 202 AEHRAHGVDLRTGAAMDCIEGDGTKVTGVRMQDGSVIPADIVIVGIGIVPCVGALISAGASGG 264 (415)
T ss_dssp HHHHHTTCEEEETCCEEEEEESSSBEEEEEESSSCEEECSEEEECSCCEESCHHHHHTTCCCS
T ss_pred HHHHhCCCEEEECCEEEEEEecCCcEEEEEeCCCCEEEcCEEEECCCCccChHHHHhCCCCcC
Confidence 99999999999995 9988753 588899999999999999999999 78888888765
No 7
>3fg2_P Putative rubredoxin reductase; ferredoxin reductase, RPA3782, F flavoprotein, oxidoreductase; HET: FAD; 2.20A {Rhodopseudomonas palustris}
Probab=100.00 E-value=3e-32 Score=256.19 Aligned_cols=239 Identities=20% Similarity=0.400 Sum_probs=192.6
Q ss_pred CcEEEECCchhHHHHHHhhhccCc--eEEEEcCCCccccc-hhhh-hhhcccccccccccchhccchhhhcCCCeEEEEE
Q 018704 63 PRVVVLGSGWAGCRLMKGIDTSLY--DVVCVSPRNHMVFT-PLLA-STCVGTLEFRSVAEPIARIQPAISREPGSYFFLS 138 (351)
Q Consensus 63 ~~VvIIG~G~aGl~aA~~L~~~g~--~v~vie~~~~~~~~-~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 138 (351)
++|+|||||+||++||..|++.|+ +|+|||+++.+.|. +.+. ....+......+.... .......++.++..
T Consensus 2 k~vvIIGaG~aGl~aA~~L~~~g~~~~V~lie~~~~~~y~~~~l~~~~l~~~~~~~~~~~~~----~~~~~~~~i~~~~~ 77 (404)
T 3fg2_P 2 DTVLIAGAGHAGFQVAVSLRQAKYPGRIALINDEKHLPYQRPPLSKAYLKSGGDPNSLMFRP----EKFFQDQAIELISD 77 (404)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCSCEEEECCSSSSSBCSGGGGTGGGGSCCCTTSSBSSC----HHHHHHTTEEEECC
T ss_pred CCEEEEcChHHHHHHHHHHHhhCcCCCEEEEeCCCCCCCCCccCCHHHHCCCCCHHHccCCC----HHHHHhCCCEEEEE
Confidence 689999999999999999999998 89999999987764 3222 2332322222221111 12233357777779
Q ss_pred EeeeEeCCCCEEEEEeecCccccCCCceeEeeccEEEEecCCCcCCCCCCCcc-ccccccCCHHHHHHHHHHHHHhhhcc
Q 018704 139 HCAGIDTDNHVVHCETVTDELRTLEPWKFKISYDKLVIALGAEASTFGIHGVK-ENATFLREVHHAQEIRRKLLLNLMLS 217 (351)
Q Consensus 139 ~v~~i~~~~~~v~~~~~~~~~~~~~~~~~~~~~d~lviAtG~~p~~p~i~g~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 217 (351)
+|+.++.+.+.+.+ .++. .+.||+||+|||+.|+.|++||.+ +++++.++..++..+...+
T Consensus 78 ~v~~id~~~~~v~~---~~g~--------~~~~d~lvlAtG~~p~~~~i~g~~~~~v~~~~~~~d~~~l~~~~------- 139 (404)
T 3fg2_P 78 RMVSIDREGRKLLL---ASGT--------AIEYGHLVLATGARNRMLDVPNASLPDVLYLRTLDESEVLRQRM------- 139 (404)
T ss_dssp CEEEEETTTTEEEE---SSSC--------EEECSEEEECCCEEECCCCSTTTTSTTEECCSSHHHHHHHHHHG-------
T ss_pred EEEEEECCCCEEEE---CCCC--------EEECCEEEEeeCCCccCCCCCCCCCCcEEEECCHHHHHHHHHHh-------
Confidence 99999999998866 4555 899999999999999999999976 5677788888888877654
Q ss_pred CCCCCCHhhhcccCeEEEECCChHHHHHHHHHHHHHHHHHHhhhcCCCCccEEEEEeCCC-CCC-CCcHHHHHHHHHHhh
Q 018704 218 DVPGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANE-ILS-SFDDRLRHYATTQLS 295 (351)
Q Consensus 218 ~~p~~~~~~~~~~~~v~VvGgG~~a~e~a~~l~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~l~-~~~~~~~~~~~~~l~ 295 (351)
...++++|||+|.+|+|+|..+.+.+ .+|+++++.+ +++ .+++.+.+.+.+.++
T Consensus 140 ----------~~~~~vvViGgG~~g~e~A~~l~~~g--------------~~Vtvv~~~~~~~~~~~~~~~~~~l~~~l~ 195 (404)
T 3fg2_P 140 ----------PDKKHVVVIGAGFIGLEFAATARAKG--------------LEVDVVELAPRVMARVVTPEISSYFHDRHS 195 (404)
T ss_dssp ----------GGCSEEEEECCSHHHHHHHHHHHHTT--------------CEEEEECSSSSTTTTTSCHHHHHHHHHHHH
T ss_pred ----------hcCCeEEEECCCHHHHHHHHHHHhCC--------------CEEEEEeCCCcchhhccCHHHHHHHHHHHH
Confidence 34579999999999999999999877 8999999974 444 478999999999999
Q ss_pred hcCcEEEcCe-EEEEeCC-----eEEecCCcEEeccEEEEecCCCCc-cccccCCCCCC
Q 018704 296 KSGVRLVRGI-VKDVDSQ-----KLILNDGTEVPYGLLVWSTGVGPS-TLVKSLDLPKS 347 (351)
Q Consensus 296 ~~gV~~~~~~-v~~v~~~-----~v~~~~g~~~~~D~vi~a~G~~p~-~~~~~~gl~~~ 347 (351)
+.||+++++. |++++.+ +|.+.+|++++||.||+|+|++|+ ++++.+|++++
T Consensus 196 ~~GV~i~~~~~v~~i~~~~~~v~~V~~~dG~~i~aD~Vv~a~G~~p~~~l~~~~gl~~~ 254 (404)
T 3fg2_P 196 GAGIRMHYGVRATEIAAEGDRVTGVVLSDGNTLPCDLVVVGVGVIPNVEIAAAAGLPTA 254 (404)
T ss_dssp HTTCEEECSCCEEEEEEETTEEEEEEETTSCEEECSEEEECCCEEECCHHHHHTTCCBS
T ss_pred hCCcEEEECCEEEEEEecCCcEEEEEeCCCCEEEcCEEEECcCCccCHHHHHhCCCCCC
Confidence 9999999994 9988753 588899999999999999999999 79998888775
No 8
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=100.00 E-value=8e-32 Score=264.98 Aligned_cols=254 Identities=22% Similarity=0.338 Sum_probs=202.3
Q ss_pred CCCCcEEEECCchhHHHHHHhhhcc--CceEEEEcCCCccccchh-hhhhhcccccccccccchhccchhhhcCCCeEE-
Q 018704 60 NEKPRVVVLGSGWAGCRLMKGIDTS--LYDVVCVSPRNHMVFTPL-LASTCVGTLEFRSVAEPIARIQPAISREPGSYF- 135 (351)
Q Consensus 60 ~~~~~VvIIG~G~aGl~aA~~L~~~--g~~v~vie~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 135 (351)
++++||+|||||+|||+||..|++. |++|+|||+++...|.+. ++....+..... ...+......+....++.+
T Consensus 34 ~~~~~VvIIGgG~AGl~aA~~L~~~~~g~~V~vie~~~~~~~~~~~lp~~~~g~~~~~--~~~~~~~~~~~~~~~gi~v~ 111 (588)
T 3ics_A 34 WGSRKIVVVGGVAGGASVAARLRRLSEEDEIIMVERGEYISFANCGLPYYIGGVITER--QKLLVQTVERMSKRFNLDIR 111 (588)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHHHCSSSEEEEECSSSCSSBCGGGHHHHHTTSSCCG--GGGBSSCHHHHHHHTTCEEE
T ss_pred ccCCCEEEECCcHHHHHHHHHHHhhCcCCCEEEEECCCCccccCCCCchhhcCcCCCh--HHhhccCHHHHHHhcCcEEE
Confidence 4458999999999999999999997 899999999998877642 333232222111 1112222333343446666
Q ss_pred EEEEeeeEeCCCCEEEEEeecCccccCCCceeEeeccEEEEecCCCcCCCCCCCc-c-ccccccCCHHHHHHHHHHHHHh
Q 018704 136 FLSHCAGIDTDNHVVHCETVTDELRTLEPWKFKISYDKLVIALGAEASTFGIHGV-K-ENATFLREVHHAQEIRRKLLLN 213 (351)
Q Consensus 136 ~~~~v~~i~~~~~~v~~~~~~~~~~~~~~~~~~~~~d~lviAtG~~p~~p~i~g~-~-~~~~~~~~~~~~~~~~~~~~~~ 213 (351)
+..+|+.++.+.+.+.+....++. ...+.||+||+|||+.|+.|++||. + +.+++.+++.+...+...+..
T Consensus 112 ~~~~V~~id~~~~~v~v~~~~~g~------~~~~~~d~lviAtG~~p~~p~i~G~~~~~~v~~~~~~~~~~~~~~~l~~- 184 (588)
T 3ics_A 112 VLSEVVKINKEEKTITIKNVTTNE------TYNEAYDVLILSPGAKPIVPSIPGIEEAKALFTLRNVPDTDRIKAYIDE- 184 (588)
T ss_dssp CSEEEEEEETTTTEEEEEETTTCC------EEEEECSEEEECCCEEECCCCCTTTTTCTTEEECSSHHHHHHHHHHHHH-
T ss_pred ECCEEEEEECCCCEEEEeecCCCC------EEEEeCCEEEECCCCCCCCCCCCCcccCCCeEEeCCHHHHHHHHHHHhh-
Confidence 457999999999999886544443 2378999999999999999999998 3 567778888888877766521
Q ss_pred hhccCCCCCCHhhhcccCeEEEECCChHHHHHHHHHHHHHHHHHHhhhcCCCCccEEEEEeCC-CCCCCCcHHHHHHHHH
Q 018704 214 LMLSDVPGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN-EILSSFDDRLRHYATT 292 (351)
Q Consensus 214 ~~~~~~p~~~~~~~~~~~~v~VvGgG~~a~e~a~~l~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~l~~~~~~~~~~~~~ 292 (351)
...++++|||||.+|+|+|..+.+++ .+|+++++. .+++.+++++.+.+.+
T Consensus 185 --------------~~~~~vvViGgG~~g~e~A~~l~~~g--------------~~Vtlv~~~~~~l~~~~~~~~~~l~~ 236 (588)
T 3ics_A 185 --------------KKPRHATVIGGGFIGVEMVENLRERG--------------IEVTLVEMANQVMPPIDYEMAAYVHE 236 (588)
T ss_dssp --------------HCCSEEEEECCSHHHHHHHHHHHHTT--------------CEEEEECSSSSSCTTSCHHHHHHHHH
T ss_pred --------------cCCCeEEEECCCHHHHHHHHHHHhCC--------------CeEEEEecCCcccccCCHHHHHHHHH
Confidence 23469999999999999999999887 899999997 5778899999999999
Q ss_pred HhhhcCcEEEcCe-EEEEeC--CeEEecCCcEEeccEEEEecCCCCc-cccccCCCCCCCCC
Q 018704 293 QLSKSGVRLVRGI-VKDVDS--QKLILNDGTEVPYGLLVWSTGVGPS-TLVKSLDLPKSPGG 350 (351)
Q Consensus 293 ~l~~~gV~~~~~~-v~~v~~--~~v~~~~g~~~~~D~vi~a~G~~p~-~~~~~~gl~~~~~G 350 (351)
.+++.||+++.+. |++++. +++.+.+|+++++|.||+|+|++|+ ++++.+|++++++|
T Consensus 237 ~l~~~GV~i~~~~~v~~i~~~~~~v~~~~g~~i~~D~Vi~a~G~~p~~~~l~~~g~~~~~~g 298 (588)
T 3ics_A 237 HMKNHDVELVFEDGVDALEENGAVVRLKSGSVIQTDMLILAIGVQPESSLAKGAGLALGVRG 298 (588)
T ss_dssp HHHHTTCEEECSCCEEEEEGGGTEEEETTSCEEECSEEEECSCEEECCHHHHHTTCCBCGGG
T ss_pred HHHHcCCEEEECCeEEEEecCCCEEEECCCCEEEcCEEEEccCCCCChHHHHhcCceEcCCC
Confidence 9999999999995 999976 6899999999999999999999999 78888898887655
No 9
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A*
Probab=100.00 E-value=2.9e-32 Score=256.45 Aligned_cols=237 Identities=24% Similarity=0.368 Sum_probs=188.4
Q ss_pred CCCcEEEECCchhHHHHHHhhhccCce--EEEEcCCCccccc-hhhh-hhhcccccccccccchhccchhhhcCCCeEEE
Q 018704 61 EKPRVVVLGSGWAGCRLMKGIDTSLYD--VVCVSPRNHMVFT-PLLA-STCVGTLEFRSVAEPIARIQPAISREPGSYFF 136 (351)
Q Consensus 61 ~~~~VvIIG~G~aGl~aA~~L~~~g~~--v~vie~~~~~~~~-~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 136 (351)
+++||+|||||++|+++|..|++.|.+ |+|||+++...|. +.+. ....+.. ...+ .+. .....++.++
T Consensus 6 ~~~~vvIIG~G~aGl~aA~~l~~~g~~~~V~lie~~~~~~~~~~~~~~~~~~~~~-~~~~--~~~-----~~~~~~v~~~ 77 (408)
T 2gqw_A 6 LKAPVVVLGAGLASVSFVAELRQAGYQGLITVVGDEAERPYDRPPLSKDFMAHGD-AEKI--RLD-----CKRAPEVEWL 77 (408)
T ss_dssp CCSSEEEECCSHHHHHHHHHHHHHTCCSCEEEEESSCSCCBCSGGGGTHHHHHCC-GGGS--BCC-----CTTSCSCEEE
T ss_pred CCCcEEEECChHHHHHHHHHHHccCCCCeEEEEECCCCCcccCCCCCHHHhCCCc-hhhh--hHH-----HHHHCCCEEE
Confidence 457999999999999999999999885 9999999876654 2222 1221211 1111 011 2234577877
Q ss_pred EE-EeeeEeCCCCEEEEEeecCccccCCCceeEeeccEEEEecCCCcCCCCC-CCccccccccCCHHHHHHHHHHHHHhh
Q 018704 137 LS-HCAGIDTDNHVVHCETVTDELRTLEPWKFKISYDKLVIALGAEASTFGI-HGVKENATFLREVHHAQEIRRKLLLNL 214 (351)
Q Consensus 137 ~~-~v~~i~~~~~~v~~~~~~~~~~~~~~~~~~~~~d~lviAtG~~p~~p~i-~g~~~~~~~~~~~~~~~~~~~~~~~~~ 214 (351)
.. +|+.++.+.+.+.+ .++. .+.||+||+|||+.|+.|++ ||.+++++++++.+++..+.+.+
T Consensus 78 ~~~~v~~i~~~~~~v~~---~~g~--------~~~~d~lviAtG~~~~~~~i~~G~~~~v~~~~~~~~~~~l~~~~---- 142 (408)
T 2gqw_A 78 LGVTAQSFDPQAHTVAL---SDGR--------TLPYGTLVLATGAAPRALPTLQGATMPVHTLRTLEDARRIQAGL---- 142 (408)
T ss_dssp ETCCEEEEETTTTEEEE---TTSC--------EEECSEEEECCCEEECCCGGGTTCSSCEEECCSHHHHHHHHTTC----
T ss_pred cCCEEEEEECCCCEEEE---CCCC--------EEECCEEEECCCCCCCCCCccCCCCCcEEEECCHHHHHHHHHHh----
Confidence 76 59999998888765 3555 89999999999999999999 99865667778888877765532
Q ss_pred hccCCCCCCHhhhcccCeEEEECCChHHHHHHHHHHHHHHHHHHhhhcCCCCccEEEEEeCCC-CCC-CCcHHHHHHHHH
Q 018704 215 MLSDVPGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANE-ILS-SFDDRLRHYATT 292 (351)
Q Consensus 215 ~~~~~p~~~~~~~~~~~~v~VvGgG~~a~e~a~~l~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~l~-~~~~~~~~~~~~ 292 (351)
...++++|||||.+|+|+|..|.+++ .+|+++++.+ +++ .+++++.+.+.+
T Consensus 143 -------------~~~~~vvViGgG~~g~E~A~~l~~~g--------------~~Vtlv~~~~~~l~~~~~~~~~~~l~~ 195 (408)
T 2gqw_A 143 -------------RPQSRLLIVGGGVIGLELAATARTAG--------------VHVSLVETQPRLMSRAAPATLADFVAR 195 (408)
T ss_dssp -------------CTTCEEEEECCSHHHHHHHHHHHHTT--------------CEEEEEESSSSSSTTTSCHHHHHHHHH
T ss_pred -------------hcCCeEEEECCCHHHHHHHHHHHhCC--------------CEEEEEEeCCcccccccCHHHHHHHHH
Confidence 23469999999999999999999877 8999999974 565 488999999999
Q ss_pred HhhhcCcEEEcCe-EEEEeCCeEEecCCcEEeccEEEEecCCCCc-cccccCCCCCC
Q 018704 293 QLSKSGVRLVRGI-VKDVDSQKLILNDGTEVPYGLLVWSTGVGPS-TLVKSLDLPKS 347 (351)
Q Consensus 293 ~l~~~gV~~~~~~-v~~v~~~~v~~~~g~~~~~D~vi~a~G~~p~-~~~~~~gl~~~ 347 (351)
.+++.||+++.+. |++++++.|++.+|+++++|.||+|+|++|+ ++++.+|++++
T Consensus 196 ~l~~~GV~i~~~~~v~~i~~~~v~~~~g~~i~~D~vi~a~G~~p~~~l~~~~gl~~~ 252 (408)
T 2gqw_A 196 YHAAQGVDLRFERSVTGSVDGVVLLDDGTRIAADMVVVGIGVLANDALARAAGLACD 252 (408)
T ss_dssp HHHHTTCEEEESCCEEEEETTEEEETTSCEEECSEEEECSCEEECCHHHHHHTCCBS
T ss_pred HHHHcCcEEEeCCEEEEEECCEEEECCCCEEEcCEEEECcCCCccHHHHHhCCCCCC
Confidence 9999999999994 9999855889999999999999999999999 78888887764
No 10
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris}
Probab=100.00 E-value=4.3e-32 Score=260.09 Aligned_cols=254 Identities=22% Similarity=0.321 Sum_probs=182.5
Q ss_pred CCcEEEECCchhHHHHHHhhhcc--CceEEEEcCCCccccchh-hhhhhcccccc-ccc---ccchhccchhhhcCCCeE
Q 018704 62 KPRVVVLGSGWAGCRLMKGIDTS--LYDVVCVSPRNHMVFTPL-LASTCVGTLEF-RSV---AEPIARIQPAISREPGSY 134 (351)
Q Consensus 62 ~~~VvIIG~G~aGl~aA~~L~~~--g~~v~vie~~~~~~~~~~-~~~~~~~~~~~-~~~---~~~~~~~~~~~~~~~~~~ 134 (351)
++||+|||||++||+||..|++. |++|+|||+++.+.|.+. ++....+.... ..+ ...+......+....++.
T Consensus 3 ~~~VvIIGaG~aGl~aA~~L~~~~~g~~Vtvie~~~~~~~~~~gl~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~gi~ 82 (472)
T 3iwa_A 3 LKHVVVIGAVALGPKAACRFKRLDPEAHVTMIDQASRISYGGCGIPYYVSGEVSNIESLQATPYNVVRDPEFFRINKDVE 82 (472)
T ss_dssp -CEEEEECCSSHHHHHHHHHHHHCTTSEEEEECCC-------------------------------------------CE
T ss_pred CCcEEEECCCHHHHHHHHHHHhhCcCCCEEEEECCCcccccccccchhhcCCCCchHHhccccchhccCHHHHhhhcCcE
Confidence 47999999999999999999997 999999999998776532 22222222111 111 000222223333344666
Q ss_pred E-EEEEeeeEeCCCCEEEEEeecCccccCCCceeEeeccEEEEecCCCcCCCCCCCcc-ccccccCCHHHHHHHHHHHHH
Q 018704 135 F-FLSHCAGIDTDNHVVHCETVTDELRTLEPWKFKISYDKLVIALGAEASTFGIHGVK-ENATFLREVHHAQEIRRKLLL 212 (351)
Q Consensus 135 ~-~~~~v~~i~~~~~~v~~~~~~~~~~~~~~~~~~~~~d~lviAtG~~p~~p~i~g~~-~~~~~~~~~~~~~~~~~~~~~ 212 (351)
+ ...+|+.++.+.+.+.+....++. ...+.||+||+|||+.|..|++||.+ +.++++.+..++..+.+.+.
T Consensus 83 ~~~~~~V~~id~~~~~v~~~~~~~g~------~~~~~~d~lviAtG~~p~~p~i~G~~~~~v~~~~~~~~~~~l~~~l~- 155 (472)
T 3iwa_A 83 ALVETRAHAIDRAAHTVEIENLRTGE------RRTLKYDKLVLALGSKANRPPVEGMDLAGVTPVTNLDEAEFVQHAIS- 155 (472)
T ss_dssp EECSEEEEEEETTTTEEEEEETTTCC------EEEEECSEEEECCCEEECCCSCTTTTSBTEEECCSHHHHHHHHHHCC-
T ss_pred EEECCEEEEEECCCCEEEEeecCCCC------EEEEECCEEEEeCCCCcCCCCCCCCCCCCEEEeCCHHHHHHHHHHhh-
Confidence 5 457999999999999886543343 23789999999999999999999985 56677788888777665431
Q ss_pred hhhccCCCCCCHhhhcccCeEEEECCChHHHHHHHHHHHH-HHHHHHhhhcCCCCccEEEEEeCC-CCCC-CCcHHHHHH
Q 018704 213 NLMLSDVPGISEEEKSRLLHCVVVGGGPTGVEFSGELSDF-IMRDVRQRYSHVKDYIHVTLIEAN-EILS-SFDDRLRHY 289 (351)
Q Consensus 213 ~~~~~~~p~~~~~~~~~~~~v~VvGgG~~a~e~a~~l~~~-~~~~~~~~~~~~~~~~~v~~~~~~-~~l~-~~~~~~~~~ 289 (351)
....++++|||+|.+|+|+|..+.++ + .+|+++++. .+++ .+++++.+.
T Consensus 156 --------------~~~~~~vvViGgG~~g~e~A~~l~~~~g--------------~~Vtlv~~~~~~l~~~~~~~~~~~ 207 (472)
T 3iwa_A 156 --------------AGEVSKAVIVGGGFIGLEMAVSLADMWG--------------IDTTVVELADQIMPGFTSKSLSQM 207 (472)
T ss_dssp --------------TTSCSEEEEECCSHHHHHHHHHHHHHHC--------------CEEEEECSSSSSSTTTSCHHHHHH
T ss_pred --------------cCCCCEEEEECCCHHHHHHHHHHHHhcC--------------CcEEEEEccCcccccccCHHHHHH
Confidence 01246999999999999999999987 6 899999997 4677 889999999
Q ss_pred HHHHhhhcCcEEEcC-eEEEEeC-C-e--EEecCCcEEeccEEEEecCCCCc-cccccCCCCCCCCC
Q 018704 290 ATTQLSKSGVRLVRG-IVKDVDS-Q-K--LILNDGTEVPYGLLVWSTGVGPS-TLVKSLDLPKSPGG 350 (351)
Q Consensus 290 ~~~~l~~~gV~~~~~-~v~~v~~-~-~--v~~~~g~~~~~D~vi~a~G~~p~-~~~~~~gl~~~~~G 350 (351)
+.+.+++.||+++.+ +|++++. + + +.+.+|+++++|.||+|+|++|+ ++++.+|++++++|
T Consensus 208 l~~~l~~~GV~i~~~~~v~~i~~~~~~v~v~~~~g~~i~aD~Vv~a~G~~p~~~l~~~~gl~~~~~g 274 (472)
T 3iwa_A 208 LRHDLEKNDVVVHTGEKVVRLEGENGKVARVITDKRTLDADLVILAAGVSPNTQLARDAGLELDPRG 274 (472)
T ss_dssp HHHHHHHTTCEEECSCCEEEEEESSSBEEEEEESSCEEECSEEEECSCEEECCHHHHHHTCCBCTTC
T ss_pred HHHHHHhcCCEEEeCCEEEEEEccCCeEEEEEeCCCEEEcCEEEECCCCCcCHHHHHhCCccCCCCC
Confidence 999999999999999 4998875 2 2 67788999999999999999999 78888899888766
No 11
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=100.00 E-value=1.1e-31 Score=262.85 Aligned_cols=251 Identities=21% Similarity=0.329 Sum_probs=197.0
Q ss_pred CcEEEECCchhHHHHHHhhhcc--CceEEEEcCCCccccchh-hhhhhcccccccccccchhccchhhhcCCCeEEE-EE
Q 018704 63 PRVVVLGSGWAGCRLMKGIDTS--LYDVVCVSPRNHMVFTPL-LASTCVGTLEFRSVAEPIARIQPAISREPGSYFF-LS 138 (351)
Q Consensus 63 ~~VvIIG~G~aGl~aA~~L~~~--g~~v~vie~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 138 (351)
+||+|||||+|||+||..|++. +++|+|||+++.+.|.+. ++....+.... ....+.+....+....++.++ ..
T Consensus 2 ~~VvIIGgG~AGl~aA~~L~~~~~~~~V~lie~~~~~~~~~~~l~~~~~~~~~~--~~~~~~~~~~~~~~~~~i~~~~~~ 79 (565)
T 3ntd_A 2 KKILIIGGVAGGASAAARARRLSETAEIIMFERGEYVSFANCGLPYHISGEIAQ--RSALVLQTPESFKARFNVEVRVKH 79 (565)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCSSSEEEEECSSSCSSBCGGGHHHHHTSSSCC--GGGGBCCCHHHHHHHHCCEEETTE
T ss_pred CcEEEECCCHHHHHHHHHHHhhCcCCCEEEEECCCCccccccCchHHhcCCcCC--hHHhhccCHHHHHHhcCcEEEECC
Confidence 6899999999999999999987 889999999998877642 33222222211 111122222333333466664 57
Q ss_pred EeeeEeCCCCEEEEEeecCccccCCCceeEeeccEEEEecCCCcCCCCCCCcc-ccccccCCHHHHHHHHHHHHHhhhcc
Q 018704 139 HCAGIDTDNHVVHCETVTDELRTLEPWKFKISYDKLVIALGAEASTFGIHGVK-ENATFLREVHHAQEIRRKLLLNLMLS 217 (351)
Q Consensus 139 ~v~~i~~~~~~v~~~~~~~~~~~~~~~~~~~~~d~lviAtG~~p~~p~i~g~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 217 (351)
+|+.++.+.+.+.+....++. ...+.||+||||||+.|+.|++||.+ ..+++.+++.++..+.+.+..
T Consensus 80 ~V~~id~~~~~v~~~~~~~g~------~~~~~~d~lviAtG~~p~~p~ipG~~~~~v~~~~~~~~~~~l~~~~~~----- 148 (565)
T 3ntd_A 80 EVVAIDRAAKLVTVRRLLDGS------EYQESYDTLLLSPGAAPIVPPIPGVDNPLTHSLRNIPDMDRILQTIQM----- 148 (565)
T ss_dssp EEEEEETTTTEEEEEETTTCC------EEEEECSEEEECCCEEECCCCCTTCCSTTEECCSSHHHHHHHHHHHHH-----
T ss_pred EEEEEECCCCEEEEEecCCCC------eEEEECCEEEECCCCCCCCCCCCCCCCCCEEEeCCHHHHHHHHHHHhh-----
Confidence 999999999999887544343 23789999999999999999999985 566778888888777765421
Q ss_pred CCCCCCHhhhcccCeEEEECCChHHHHHHHHHHHHHHHHHHhhhcCCCCccEEEEEeCC-CCCCCCcHHHHHHHHHHhhh
Q 018704 218 DVPGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN-EILSSFDDRLRHYATTQLSK 296 (351)
Q Consensus 218 ~~p~~~~~~~~~~~~v~VvGgG~~a~e~a~~l~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~l~~~~~~~~~~~~~~l~~ 296 (351)
...++++|||||++|+|+|..|.+++ .+|+++++. .+++.+++++.+.+.+.+++
T Consensus 149 ----------~~~~~vvViGgG~~g~e~A~~l~~~g--------------~~Vtlv~~~~~~l~~~~~~~~~~l~~~l~~ 204 (565)
T 3ntd_A 149 ----------NNVEHATVVGGGFIGLEMMESLHHLG--------------IKTTLLELADQVMTPVDREMAGFAHQAIRD 204 (565)
T ss_dssp ----------TTCSEEEEECCSHHHHHHHHHHHHTT--------------CEEEEEESSSSSCTTSCHHHHHHHHHHHHH
T ss_pred ----------CCCCEEEEECCCHHHHHHHHHHHhcC--------------CcEEEEEcCCccchhcCHHHHHHHHHHHHH
Confidence 33469999999999999999999887 899999997 57788899999999999999
Q ss_pred cCcEEEcCe-EEEEeC---------------------C--eEEecCCcEEeccEEEEecCCCCc-cccccCCCCCCCCC
Q 018704 297 SGVRLVRGI-VKDVDS---------------------Q--KLILNDGTEVPYGLLVWSTGVGPS-TLVKSLDLPKSPGG 350 (351)
Q Consensus 297 ~gV~~~~~~-v~~v~~---------------------~--~v~~~~g~~~~~D~vi~a~G~~p~-~~~~~~gl~~~~~G 350 (351)
.||+++.+. |++++. + .+++.+|+++++|.||+|+|++|+ ++++.+|++++++|
T Consensus 205 ~GV~i~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~g~~i~~D~vi~a~G~~p~~~l~~~~g~~~~~~g 283 (565)
T 3ntd_A 205 QGVDLRLGTALSEVSYQVQTHVASDAAGEDTAHQHIKGHLSLTLSNGELLETDLLIMAIGVRPETQLARDAGLAIGELG 283 (565)
T ss_dssp TTCEEEETCCEEEEEEECCCCCCCGGGTCCCTTCCTTCEEEEEETTSCEEEESEEEECSCEEECCHHHHHHTCCBCTTS
T ss_pred CCCEEEeCCeEEEEeccccccccccccccccccccCCCcEEEEEcCCCEEEcCEEEECcCCccchHHHHhCCcccCCCC
Confidence 999999994 888864 2 466788999999999999999999 78888888887766
No 12
>3cgb_A Pyridine nucleotide-disulfide oxidoreductase, CLA; coenzyme A, flavin adenine dinucleotide, selenomethionine, F flavoprotein; HET: COA FAD; 1.90A {Bacillus anthracis str} PDB: 3cgc_A* 3cgd_A* 3cge_A*
Probab=99.98 E-value=1.1e-30 Score=250.69 Aligned_cols=252 Identities=21% Similarity=0.334 Sum_probs=192.2
Q ss_pred CCcEEEECCchhHHHHHHhhhcc--CceEEEEcCCCccccchh-hhhhhcccccccccccchhccchhhhcCCCeEEEE-
Q 018704 62 KPRVVVLGSGWAGCRLMKGIDTS--LYDVVCVSPRNHMVFTPL-LASTCVGTLEFRSVAEPIARIQPAISREPGSYFFL- 137 (351)
Q Consensus 62 ~~~VvIIG~G~aGl~aA~~L~~~--g~~v~vie~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 137 (351)
++||+|||||++|+++|..|++. |.+|+|||+++...|.+. ++....+... .+..........+....++.++.
T Consensus 36 ~~dvvIIG~G~aGl~aA~~l~~~~~g~~V~lie~~~~~~~~~~~~~~~~~~~~~--~~~~l~~~~~~~~~~~~gv~~~~~ 113 (480)
T 3cgb_A 36 SMNYVIIGGDAAGMSAAMQIVRNDENANVVTLEKGEIYSYAQCGLPYVISGAIA--STEKLIARNVKTFRDKYGIDAKVR 113 (480)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHHCTTCEEEEECSSSCCSBCGGGHHHHHTTSSS--CGGGGBSSCHHHHHHTTCCEEESS
T ss_pred cceEEEECCCHHHHHHHHHHHhhCcCCcEEEEECCCCCCCCCCCcchhhcCCcC--CHHHhhhcCHHHHHhhcCCEEEeC
Confidence 46999999999999999999986 899999999987765532 2222222111 11111222223343445777765
Q ss_pred EEeeeEeCCCCEEEEEeecCccccCCCceeEeeccEEEEecCCCcCCCCCCCcc-ccccccCCHHHHHHHHHHHHHhhhc
Q 018704 138 SHCAGIDTDNHVVHCETVTDELRTLEPWKFKISYDKLVIALGAEASTFGIHGVK-ENATFLREVHHAQEIRRKLLLNLML 216 (351)
Q Consensus 138 ~~v~~i~~~~~~v~~~~~~~~~~~~~~~~~~~~~d~lviAtG~~p~~p~i~g~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 216 (351)
..|+.++.+.+.+.+....+++ ..++.||+||||||+.|+.|++||.+ +.++++.+.+++..+.+.+..
T Consensus 114 ~~v~~i~~~~~~v~v~~~~~g~------~~~~~~d~lviAtG~~p~~p~i~G~~~~~v~~~~~~~~~~~l~~~~~~---- 183 (480)
T 3cgb_A 114 HEVTKVDTEKKIVYAEHTKTKD------VFEFSYDRLLIATGVRPVMPEWEGRDLQGVHLLKTIPDAERILKTLET---- 183 (480)
T ss_dssp EEEEEEETTTTEEEEEETTTCC------EEEEECSEEEECCCEEECCCCCBTTTSBTEECCSSHHHHHHHHHHHHS----
T ss_pred CEEEEEECCCCEEEEEEcCCCc------eEEEEcCEEEECCCCcccCCCCCCccCCCEEEeCCHHHHHHHHHHhhh----
Confidence 6899999999988876422332 13689999999999999999999986 457777888888877765420
Q ss_pred cCCCCCCHhhhcccCeEEEECCChHHHHHHHHHHHHHHHHHHhhhcCCCCccEEEEEeCC-CCCCCCcHHHHHHHHHHhh
Q 018704 217 SDVPGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN-EILSSFDDRLRHYATTQLS 295 (351)
Q Consensus 217 ~~~p~~~~~~~~~~~~v~VvGgG~~a~e~a~~l~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~l~~~~~~~~~~~~~~l~ 295 (351)
...++++|||||++|+|+|..|.+++ .+|+++++. .+++.+++++.+.+.+.++
T Consensus 184 -----------~~~~~vvViGgG~~g~e~A~~l~~~g--------------~~Vtlv~~~~~~l~~~~~~~~~~l~~~l~ 238 (480)
T 3cgb_A 184 -----------NKVEDVTIIGGGAIGLEMAETFVELG--------------KKVRMIERNDHIGTIYDGDMAEYIYKEAD 238 (480)
T ss_dssp -----------SCCCEEEEECCHHHHHHHHHHHHHTT--------------CEEEEECCGGGTTSSSCHHHHHHHHHHHH
T ss_pred -----------cCCCeEEEECCCHHHHHHHHHHHhcC--------------CeEEEEEeCCchhhcCCHHHHHHHHHHHH
Confidence 13469999999999999999999877 899999997 4777889999999999999
Q ss_pred hcCcEEEcCe-EEEEeCC-eE--EecCCcEEeccEEEEecCCCCc-cccccCCCCCCCCC
Q 018704 296 KSGVRLVRGI-VKDVDSQ-KL--ILNDGTEVPYGLLVWSTGVGPS-TLVKSLDLPKSPGG 350 (351)
Q Consensus 296 ~~gV~~~~~~-v~~v~~~-~v--~~~~g~~~~~D~vi~a~G~~p~-~~~~~~gl~~~~~G 350 (351)
+.||+++.+. |++++.+ ++ ...++.++++|.||+|+|++|+ ++++.+|++++++|
T Consensus 239 ~~Gv~i~~~~~v~~i~~~~~v~~v~~~~~~i~~D~vi~a~G~~p~~~~l~~~g~~~~~~G 298 (480)
T 3cgb_A 239 KHHIEILTNENVKAFKGNERVEAVETDKGTYKADLVLVSVGVKPNTDFLEGTNIRTNHKG 298 (480)
T ss_dssp HTTCEEECSCCEEEEEESSBEEEEEETTEEEECSEEEECSCEEESCGGGTTSCCCBCTTS
T ss_pred HcCcEEEcCCEEEEEEcCCcEEEEEECCCEEEcCEEEECcCCCcChHHHHhCCcccCCCC
Confidence 9999999995 9888754 22 2234568999999999999999 79998898887665
No 13
>3kd9_A Coenzyme A disulfide reductase; PSI-II, NYSGXRC, oxidoreductase, structural genomics structure initiative; 2.75A {Pyrococcus horikoshii}
Probab=99.98 E-value=2.6e-31 Score=253.13 Aligned_cols=246 Identities=22% Similarity=0.297 Sum_probs=182.6
Q ss_pred CCcEEEECCchhHHHHHHhhhcc--CceEEEEcCCCccccchh-hhhhhcccccccccccchhccchhhhcCCCeEEEEE
Q 018704 62 KPRVVVLGSGWAGCRLMKGIDTS--LYDVVCVSPRNHMVFTPL-LASTCVGTLEFRSVAEPIARIQPAISREPGSYFFLS 138 (351)
Q Consensus 62 ~~~VvIIG~G~aGl~aA~~L~~~--g~~v~vie~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 138 (351)
++||+|||||+|||++|..|++. +++|+|||+++.+.+.+. ++....+..... .........+....++.++..
T Consensus 3 ~~~VvIIGgG~aGl~aA~~L~~~~~~~~V~vie~~~~~~~~~~~~p~~~~~~~~~~---~~~~~~~~~~~~~~gi~v~~~ 79 (449)
T 3kd9_A 3 LKKVVIIGGGAAGMSAASRVKRLKPEWDVKVFEATEWVSHAPCGIPYVVEGLSTPD---KLMYYPPEVFIKKRGIDLHLN 79 (449)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSSSCCC---------------------------CTHHHHTTCEEETT
T ss_pred cCcEEEECCcHHHHHHHHHHHHhCcCCCEEEEECCCccccCCcCCccccCCCCCHH---HhhhcCHHHHHHhcCcEEEec
Confidence 47999999999999999999997 889999999987765542 222211111111 111112222333456777765
Q ss_pred -EeeeEeCCCCEEEEEeecCccccCCCceeEeeccEEEEecCCCcCCCCCCCcc-ccccccCCHHHHHHHHHHHHHhhhc
Q 018704 139 -HCAGIDTDNHVVHCETVTDELRTLEPWKFKISYDKLVIALGAEASTFGIHGVK-ENATFLREVHHAQEIRRKLLLNLML 216 (351)
Q Consensus 139 -~v~~i~~~~~~v~~~~~~~~~~~~~~~~~~~~~d~lviAtG~~p~~p~i~g~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 216 (351)
+|+.++...+.+.. .++. ..+.||+||+|||+.|+.|++||.+ +.+++.++..++..+.+.+.
T Consensus 80 ~~v~~i~~~~~~v~~---~~g~-------~~~~~d~lviAtG~~p~~p~i~G~~~~~v~~~~~~~~~~~~~~~~~----- 144 (449)
T 3kd9_A 80 AEVIEVDTGYVRVRE---NGGE-------KSYEWDYLVFANGASPQVPAIEGVNLKGVFTADLPPDALAIREYME----- 144 (449)
T ss_dssp CEEEEECSSEEEEEC---SSSE-------EEEECSEEEECCCEEECCCSCBTTTSTTEECSCSTHHHHHHHHHHS-----
T ss_pred CEEEEEecCCCEEEE---CCce-------EEEEcCEEEECCCCCCCCCCCCCCCCCCEEEeCCHHHHHHHHHHHH-----
Confidence 88888877655532 2331 2799999999999999999999986 45677777778777766531
Q ss_pred cCCCCCCHhhhcccCeEEEECCChHHHHHHHHHHHHHHHHHHhhhcCCCCccEEEEEeCC-CCCCC-CcHHHHHHHHHHh
Q 018704 217 SDVPGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN-EILSS-FDDRLRHYATTQL 294 (351)
Q Consensus 217 ~~~p~~~~~~~~~~~~v~VvGgG~~a~e~a~~l~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~l~~-~~~~~~~~~~~~l 294 (351)
....++++|||||.+|+|+|..|.+++ .+|+++++. ++++. +++++.+.+.+.+
T Consensus 145 ----------~~~~~~vvViGgG~~g~E~A~~l~~~g--------------~~Vtlv~~~~~~l~~~~~~~~~~~l~~~l 200 (449)
T 3kd9_A 145 ----------KYKVENVVIIGGGYIGIEMAEAFAAQG--------------KNVTMIVRGERVLRRSFDKEVTDILEEKL 200 (449)
T ss_dssp ----------SSCCCEEEEECCSHHHHHHHHHHHHTT--------------CEEEEEESSSSTTTTTSCHHHHHHHHHHH
T ss_pred ----------hcCCCeEEEECCCHHHHHHHHHHHhCC--------------CeEEEEEcCCccchhhcCHHHHHHHHHHH
Confidence 014569999999999999999999887 899999997 46776 8999999999999
Q ss_pred hhcCcEEEcCe-EEEEeCCe---EEecCCcEEeccEEEEecCCCCc-cccccCCCCCCCCC
Q 018704 295 SKSGVRLVRGI-VKDVDSQK---LILNDGTEVPYGLLVWSTGVGPS-TLVKSLDLPKSPGG 350 (351)
Q Consensus 295 ~~~gV~~~~~~-v~~v~~~~---v~~~~g~~~~~D~vi~a~G~~p~-~~~~~~gl~~~~~G 350 (351)
++. |+++.+. |.+++.+. ..+.+|.++++|.||+|+|++|+ ++++.+|++++++|
T Consensus 201 ~~~-v~i~~~~~v~~i~~~~~v~~v~~~g~~i~~D~Vv~a~G~~p~~~l~~~~gl~~~~~G 260 (449)
T 3kd9_A 201 KKH-VNLRLQEITMKIEGEERVEKVVTDAGEYKAELVILATGIKPNIELAKQLGVRIGETG 260 (449)
T ss_dssp TTT-SEEEESCCEEEEECSSSCCEEEETTEEEECSEEEECSCEEECCHHHHHTTCCBCTTS
T ss_pred HhC-cEEEeCCeEEEEeccCcEEEEEeCCCEEECCEEEEeeCCccCHHHHHhCCccCCCCC
Confidence 999 9999995 99987642 34567889999999999999999 88898999888776
No 14
>2bc0_A NADH oxidase; flavoprotein, pyridine nucleotide disulfide oxidoreductase, C(4A)-peroxyflavin, crystallography, conformational dynamics; HET: FAD; 2.00A {Streptococcus pyogenes} PDB: 2bcp_A* 2bc1_A*
Probab=99.98 E-value=9.9e-31 Score=251.65 Aligned_cols=247 Identities=23% Similarity=0.311 Sum_probs=186.0
Q ss_pred CCCcEEEECCchhHHHHHHhhhccC---ceEEEEcCCCccccchh-hhhhhccc-ccccccccchhccchhhhcCCCeEE
Q 018704 61 EKPRVVVLGSGWAGCRLMKGIDTSL---YDVVCVSPRNHMVFTPL-LASTCVGT-LEFRSVAEPIARIQPAISREPGSYF 135 (351)
Q Consensus 61 ~~~~VvIIG~G~aGl~aA~~L~~~g---~~v~vie~~~~~~~~~~-~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 135 (351)
+++||+|||||++|+++|..|++.| .+|+|||+++...|.+. +.....+. .....+.... .. .....++.+
T Consensus 34 m~~dvvIIGaG~aGl~aA~~l~~~g~~~~~V~lie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~-~~~~~gv~v 109 (490)
T 2bc0_A 34 WGSKIVVVGANHAGTACIKTMLTNYGDANEIVVFDQNSNISFLGAGMALWIGEQIAGPEGLFYSD---KE-ELESLGAKV 109 (490)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHHGGGSEEEEECSSSCCSBCGGGHHHHHTTSSSCSGGGBSCC---HH-HHHHTTCEE
T ss_pred cCCcEEEECCCHHHHHHHHHHHhcCCCCCeEEEEECCCCCCccccccchhhcCccCCHHHhhhcC---HH-HHHhCCCEE
Confidence 3589999999999999999999987 99999999887655432 11111121 1111111111 11 222346666
Q ss_pred E-EEEeeeEeCCCCEEEEEeecCccccCCCceeEeeccEEEEecCCCcCCCCCCCcc------------ccccccCCHHH
Q 018704 136 F-LSHCAGIDTDNHVVHCETVTDELRTLEPWKFKISYDKLVIALGAEASTFGIHGVK------------ENATFLREVHH 202 (351)
Q Consensus 136 ~-~~~v~~i~~~~~~v~~~~~~~~~~~~~~~~~~~~~d~lviAtG~~p~~p~i~g~~------------~~~~~~~~~~~ 202 (351)
+ ..+|+.++.+.+.+.+....++. ++.||+||||||+.|+.|++||.+ +.+++++++.+
T Consensus 110 ~~~~~v~~i~~~~~~v~v~~~g~~~--------~~~~d~lviAtG~~p~~p~i~G~~~~~~~~~f~~~~~~v~~~~~~~~ 181 (490)
T 2bc0_A 110 YMESPVQSIDYDAKTVTALVDGKNH--------VETYDKLIFATGSQPILPPIKGAEIKEGSLEFEATLENLQFVKLYQN 181 (490)
T ss_dssp ETTCCEEEEETTTTEEEEEETTEEE--------EEECSEEEECCCEEECCCSCBTCCBCTTCTTCCBSSTTEEECSSHHH
T ss_pred EeCCEEEEEECCCCEEEEEeCCcEE--------EEECCEEEECCCCCcCCCCCCCccccccccccccccCCEEEeCCHHH
Confidence 4 45789999988888774211122 799999999999999999999975 35677788887
Q ss_pred HHHHHHHHHHhhhccCCCCCCHhhhcccCeEEEECCChHHHHHHHHHHHHHHHHHHhhhcCCCCccEEEEEeCC-CCCC-
Q 018704 203 AQEIRRKLLLNLMLSDVPGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN-EILS- 280 (351)
Q Consensus 203 ~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~v~VvGgG~~a~e~a~~l~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~l~- 280 (351)
...+.+.+. ....++++|||||.+|+|+|..|.+++ .+|+++++. .+++
T Consensus 182 ~~~~~~~~~---------------~~~~~~vvVIGgG~ig~E~A~~l~~~g--------------~~Vtlv~~~~~~l~~ 232 (490)
T 2bc0_A 182 SADVIAKLE---------------NKDIKRVAVVGAGYIGVELAEAFQRKG--------------KEVVLIDVVDTCLAG 232 (490)
T ss_dssp HHHHHHHTT---------------STTCCEEEEECCSHHHHHHHHHHHHTT--------------CEEEEEESSSSTTTT
T ss_pred HHHHHHHhh---------------hcCCceEEEECCCHHHHHHHHHHHHCC--------------CeEEEEEcccchhhh
Confidence 777665420 023469999999999999999999887 899999997 4666
Q ss_pred CCcHHHHHHHHHHhhhcCcEEEcCe-EEEEeCC----eEEecCCcEEeccEEEEecCCCCc-cccccCCCCCCCCC
Q 018704 281 SFDDRLRHYATTQLSKSGVRLVRGI-VKDVDSQ----KLILNDGTEVPYGLLVWSTGVGPS-TLVKSLDLPKSPGG 350 (351)
Q Consensus 281 ~~~~~~~~~~~~~l~~~gV~~~~~~-v~~v~~~----~v~~~~g~~~~~D~vi~a~G~~p~-~~~~~~gl~~~~~G 350 (351)
.+++++.+.+.+.+++.||+++++. |++++.+ .+.+ +|+++++|.||+|+|++|+ ++++.+ ++++++|
T Consensus 233 ~~~~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~v~~v~~-~g~~i~~D~Vi~a~G~~p~~~ll~~~-l~~~~~G 306 (490)
T 2bc0_A 233 YYDRDLTDLMAKNMEEHGIQLAFGETVKEVAGNGKVEKIIT-DKNEYDVDMVILAVGFRPNTTLGNGK-IDLFRNG 306 (490)
T ss_dssp TSCHHHHHHHHHHHHTTTCEEEETCCEEEEECSSSCCEEEE-SSCEEECSEEEECCCEEECCGGGTTC-SCBCTTS
T ss_pred HHHHHHHHHHHHHHHhCCeEEEeCCEEEEEEcCCcEEEEEE-CCcEEECCEEEECCCCCcChHHHHhh-hccCCCC
Confidence 6899999999999999999999995 9998764 2555 7788999999999999999 788776 7766655
No 15
>2cdu_A NADPH oxidase; flavoenzyme, oxidoreductase; HET: FAD ADP; 1.8A {Lactobacillus sanfranciscensis}
Probab=99.97 E-value=2.2e-30 Score=246.86 Aligned_cols=246 Identities=19% Similarity=0.303 Sum_probs=187.5
Q ss_pred CcEEEECCchhHHHHHHhhhcc--CceEEEEcCCCccccchh-hhhhhcccc---cccccccchhccchhhhcCCCeEE-
Q 018704 63 PRVVVLGSGWAGCRLMKGIDTS--LYDVVCVSPRNHMVFTPL-LASTCVGTL---EFRSVAEPIARIQPAISREPGSYF- 135 (351)
Q Consensus 63 ~~VvIIG~G~aGl~aA~~L~~~--g~~v~vie~~~~~~~~~~-~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~- 135 (351)
+||+|||||++|+++|..|++. |.+|+|||+++...|.+. +.....+.. .+..+... ... .....++.+
T Consensus 1 ~dvvIIGgG~aGl~aA~~l~~~~~g~~V~lie~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~---~~~-~~~~~gv~~~ 76 (452)
T 2cdu_A 1 MKVIVVGCTHAGTFAVKQTIADHPDADVTAYEMNDNISFLSCGIALYLGKEIKNNDPRGLFYS---SPE-ELSNLGANVQ 76 (452)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCTTCEEEEEESSSCCCBCGGGHHHHHTTCBGGGCGGGGBSC---CHH-HHHHTTCEEE
T ss_pred CeEEEECCCHHHHHHHHHHHhhCcCCcEEEEECCCCCCcccccchhhhcCCcccCCHHHhhhc---CHH-HHHHcCCEEE
Confidence 5899999999999999999997 999999999987655432 221222221 12211111 111 222346666
Q ss_pred EEEEeeeEeCCCCEEEEEeecCccccCCCceeEeeccEEEEecCCCcCCCCCCCcc-ccccccCCHHHHHHHHHHHHHhh
Q 018704 136 FLSHCAGIDTDNHVVHCETVTDELRTLEPWKFKISYDKLVIALGAEASTFGIHGVK-ENATFLREVHHAQEIRRKLLLNL 214 (351)
Q Consensus 136 ~~~~v~~i~~~~~~v~~~~~~~~~~~~~~~~~~~~~d~lviAtG~~p~~p~i~g~~-~~~~~~~~~~~~~~~~~~~~~~~ 214 (351)
...+|..++.+.+.+.+.+..+++ ...+.||+||+|||+.|+.|++||.+ +.+++++++.+...+.+..
T Consensus 77 ~~~~v~~i~~~~~~v~v~~~~~g~------~~~~~~d~lviAtGs~p~~p~i~g~~~~~v~~~~~~~~~~~~~~~~---- 146 (452)
T 2cdu_A 77 MRHQVTNVDPETKTIKVKDLITNE------EKTEAYDKLIMTTGSKPTVPPIPGIDSSRVYLCKNYNDAKKLFEEA---- 146 (452)
T ss_dssp ESEEEEEEEGGGTEEEEEETTTCC------EEEEECSEEEECCCEEECCCCCTTTTSTTEEECSSHHHHHHHHHHG----
T ss_pred eCCEEEEEEcCCCEEEEEecCCCc------eEEEECCEEEEccCCCcCCCCCCCCCCCCEEEeCcHHHHHHHHHHh----
Confidence 445799999888888875432221 12799999999999999999999986 4577788888887776643
Q ss_pred hccCCCCCCHhhhcccCeEEEECCChHHHHHHHHHHHHHHHHHHhhhcCCCCccEEEEEeCC-CCCC-CCcHHHHHHHHH
Q 018704 215 MLSDVPGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN-EILS-SFDDRLRHYATT 292 (351)
Q Consensus 215 ~~~~~p~~~~~~~~~~~~v~VvGgG~~a~e~a~~l~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~l~-~~~~~~~~~~~~ 292 (351)
...++++|||||.+|+|+|..|.+++ .+|+++++. .+++ .+++++.+.+.+
T Consensus 147 -------------~~~~~vvViGgG~~g~E~A~~l~~~g--------------~~Vtlv~~~~~~l~~~~~~~~~~~l~~ 199 (452)
T 2cdu_A 147 -------------PKAKTITIIGSGYIGAELAEAYSNQN--------------YNVNLIDGHERVLYKYFDKEFTDILAK 199 (452)
T ss_dssp -------------GGCSEEEEECCSHHHHHHHHHHHTTT--------------CEEEEEESSSSTTTTTSCHHHHHHHHH
T ss_pred -------------ccCCeEEEECcCHHHHHHHHHHHhcC--------------CEEEEEEcCCchhhhhhhhhHHHHHHH
Confidence 34469999999999999999998876 899999997 4666 689999999999
Q ss_pred HhhhcCcEEEcCe-EEEEeC--CeE--EecCCcEEeccEEEEecCCCCc-cccccCCCCCCCCC
Q 018704 293 QLSKSGVRLVRGI-VKDVDS--QKL--ILNDGTEVPYGLLVWSTGVGPS-TLVKSLDLPKSPGG 350 (351)
Q Consensus 293 ~l~~~gV~~~~~~-v~~v~~--~~v--~~~~g~~~~~D~vi~a~G~~p~-~~~~~~gl~~~~~G 350 (351)
.+++.||+++++. |++++. +++ ...+|+++++|.||+|+|++|+ ++++.. ++++++|
T Consensus 200 ~l~~~Gv~i~~~~~v~~i~~~~~~v~~v~~~g~~i~~D~vv~a~G~~p~~~ll~~~-l~~~~~G 262 (452)
T 2cdu_A 200 DYEAHGVNLVLGSKVAAFEEVDDEIITKTLDGKEIKSDIAILCIGFRPNTELLKGK-VAMLDNG 262 (452)
T ss_dssp HHHHTTCEEEESSCEEEEEEETTEEEEEETTSCEEEESEEEECCCEEECCGGGTTT-SCBCTTS
T ss_pred HHHHCCCEEEcCCeeEEEEcCCCeEEEEEeCCCEEECCEEEECcCCCCCHHHHHHh-hhcCCCC
Confidence 9999999999995 988865 333 2347888999999999999999 788776 7776655
No 16
>1q1r_A Putidaredoxin reductase; glutathione reductase fold, oxidoreductase; HET: FAD; 1.91A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1q1w_A* 3lb8_A*
Probab=99.97 E-value=5.8e-31 Score=249.25 Aligned_cols=241 Identities=24% Similarity=0.368 Sum_probs=186.0
Q ss_pred CCCcEEEECCchhHHHHHHhhhccCc--eEEEEcCCCccccc-hhhhh-hhcccccccccccchhccchhhhcCCCeEEE
Q 018704 61 EKPRVVVLGSGWAGCRLMKGIDTSLY--DVVCVSPRNHMVFT-PLLAS-TCVGTLEFRSVAEPIARIQPAISREPGSYFF 136 (351)
Q Consensus 61 ~~~~VvIIG~G~aGl~aA~~L~~~g~--~v~vie~~~~~~~~-~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 136 (351)
+.+||+|||||++|+++|..|++.|+ +|+|||+++...|. +.+.. ...+......+... . .......++.++
T Consensus 3 ~~~~vvIIGgG~aGl~aA~~l~~~g~~~~V~lie~~~~~~~~~~~l~~~~~~~~~~~~~~~~~---~-~~~~~~~gv~~~ 78 (431)
T 1q1r_A 3 ANDNVVIVGTGLAGVEVAFGLRASGWEGNIRLVGDATVIPHHLPPLSKAYLAGKATAESLYLR---T-PDAYAAQNIQLL 78 (431)
T ss_dssp CSCEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSCCSCCBCSGGGGTTTTTTCSCSGGGBSS---C-HHHHHHTTEEEE
T ss_pred CCCcEEEEcCHHHHHHHHHHHHccCcCCCEEEEECCCCCCCcCCCCcHHHhCCCCChHHhccc---C-HHHHHhCCCEEE
Confidence 35899999999999999999999998 79999998876653 22211 11121111111111 1 112233477776
Q ss_pred E-EEeeeEeCCCCEEEEEeecCccccCCCceeEeeccEEEEecCCCcCCCCCCCcc-cc---ccccCCHHHHHHHHHHHH
Q 018704 137 L-SHCAGIDTDNHVVHCETVTDELRTLEPWKFKISYDKLVIALGAEASTFGIHGVK-EN---ATFLREVHHAQEIRRKLL 211 (351)
Q Consensus 137 ~-~~v~~i~~~~~~v~~~~~~~~~~~~~~~~~~~~~d~lviAtG~~p~~p~i~g~~-~~---~~~~~~~~~~~~~~~~~~ 211 (351)
. ..|+.++.+.+.+.+ .++. ++.||+||+|||+.|+.|++||.+ +. ++++++.+++..+.+.+
T Consensus 79 ~~~~v~~i~~~~~~v~~---~~g~--------~~~~d~lviAtG~~p~~~~i~G~~~~~~~~v~~~~~~~d~~~l~~~l- 146 (431)
T 1q1r_A 79 GGTQVTAINRDRQQVIL---SDGR--------ALDYDRLVLATGGRPRPLPVASGAVGKANNFRYLRTLEDAECIRRQL- 146 (431)
T ss_dssp CSCCEEEEETTTTEEEE---TTSC--------EEECSEEEECCCEEECCCGGGTTHHHHSTTEEESSSHHHHHHHHHTC-
T ss_pred eCCEEEEEECCCCEEEE---CCCC--------EEECCEEEEcCCCCccCCCCCCcccCCCceEEEECCHHHHHHHHHHh-
Confidence 6 478999998887765 3555 899999999999999999999975 33 66677888877766543
Q ss_pred HhhhccCCCCCCHhhhcccCeEEEECCChHHHHHHHHHHHHHHHHHHhhhcCCCCccEEEEEeCCC-CCCC-CcHHHHHH
Q 018704 212 LNLMLSDVPGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANE-ILSS-FDDRLRHY 289 (351)
Q Consensus 212 ~~~~~~~~p~~~~~~~~~~~~v~VvGgG~~a~e~a~~l~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~l~~-~~~~~~~~ 289 (351)
...++++|||||.+|+|+|..|.+.+ .+|+++++.+ +++. +++++.+.
T Consensus 147 ----------------~~~~~vvViGgG~~g~E~A~~l~~~G--------------~~Vtlv~~~~~~l~~~~~~~~~~~ 196 (431)
T 1q1r_A 147 ----------------IADNRLVVIGGGYIGLEVAATAIKAN--------------MHVTLLDTAARVLERVTAPPVSAF 196 (431)
T ss_dssp ----------------CTTCEEEEECCSHHHHHHHHHHHHTT--------------CEEEEECSSSSTTTTTSCHHHHHH
T ss_pred ----------------hcCCeEEEECCCHHHHHHHHHHHhCC--------------CEEEEEEeCCccccchhhHHHHHH
Confidence 23469999999999999999999887 8999999974 5553 88999999
Q ss_pred HHHHhhhcCcEEEcCe-EEEEeC----C---eEEecCCcEEeccEEEEecCCCCc-cccccCCCCCC
Q 018704 290 ATTQLSKSGVRLVRGI-VKDVDS----Q---KLILNDGTEVPYGLLVWSTGVGPS-TLVKSLDLPKS 347 (351)
Q Consensus 290 ~~~~l~~~gV~~~~~~-v~~v~~----~---~v~~~~g~~~~~D~vi~a~G~~p~-~~~~~~gl~~~ 347 (351)
+.+.+++.||+++++. |++++. + .+.+.+|+++++|.||+|+|++|+ ++++.+|++++
T Consensus 197 l~~~l~~~GV~i~~~~~v~~i~~~~~~~~v~~v~~~~G~~i~~D~Vv~a~G~~p~~~l~~~~gl~~~ 263 (431)
T 1q1r_A 197 YEHLHREAGVDIRTGTQVCGFEMSTDQQKVTAVLCEDGTRLPADLVIAGIGLIPNCELASAAGLQVD 263 (431)
T ss_dssp HHHHHHHHTCEEECSCCEEEEEECTTTCCEEEEEETTSCEEECSEEEECCCEEECCHHHHHTTCCBS
T ss_pred HHHHHHhCCeEEEeCCEEEEEEeccCCCcEEEEEeCCCCEEEcCEEEECCCCCcCcchhhccCCCCC
Confidence 9999999999999994 988864 2 577889999999999999999999 88888888764
No 17
>3oc4_A Oxidoreductase, pyridine nucleotide-disulfide FAM; structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.60A {Enterococcus faecalis}
Probab=99.97 E-value=5.7e-31 Score=250.96 Aligned_cols=243 Identities=17% Similarity=0.250 Sum_probs=177.9
Q ss_pred CcEEEECCchhHHHHHHhhhcc--CceEEEEcCCCccccchh-hhhhhcccc-cccccccchhccchhhhcCCCeEEE-E
Q 018704 63 PRVVVLGSGWAGCRLMKGIDTS--LYDVVCVSPRNHMVFTPL-LASTCVGTL-EFRSVAEPIARIQPAISREPGSYFF-L 137 (351)
Q Consensus 63 ~~VvIIG~G~aGl~aA~~L~~~--g~~v~vie~~~~~~~~~~-~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~-~ 137 (351)
+||+|||||+|||+||..|++. |++|+|||+++...|.+. +.....+.. ....+... ....+ ...++.++ .
T Consensus 3 ~~VvIIGgG~AGl~aA~~L~~~~~g~~V~vie~~~~~g~~~~~~~~~~~~~~~~~~~~~~~---~~~~~-~~~gi~~~~~ 78 (452)
T 3oc4_A 3 LKIVIIGASFAGISAAIASRKKYPQAEISLIDKQATVGYLSGGLSAYFNHTINELHEARYI---TEEEL-RRQKIQLLLN 78 (452)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCSSSEEEEECSSSCCSSCCC----------------CCC---CHHHH-HHTTEEEECS
T ss_pred CCEEEECCCHHHHHHHHHHHhhCcCCcEEEEECCCCCcccCccchhhhcCCCCCHHHhhcC---CHHHH-HHCCCEEEEC
Confidence 6999999999999999999997 899999999998776532 111111111 11111111 11112 23466654 5
Q ss_pred EEeeeEeCCCCEEEEEeecCccccCCCceeEeeccEEEEecCCCcCCCCCCCcc-ccccccCCHHHHHHHHHHHHHhhhc
Q 018704 138 SHCAGIDTDNHVVHCETVTDELRTLEPWKFKISYDKLVIALGAEASTFGIHGVK-ENATFLREVHHAQEIRRKLLLNLML 216 (351)
Q Consensus 138 ~~v~~i~~~~~~v~~~~~~~~~~~~~~~~~~~~~d~lviAtG~~p~~p~i~g~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 216 (351)
.+|+.++.+.+.+.+....++ ..+.||+||||||+.|..|++||.+ +.+++++++.+...+.+..
T Consensus 79 ~~V~~id~~~~~v~v~~~~~~--------~~~~~d~lviAtG~~p~~p~i~g~~~~~v~~~~~~~~~~~~~~~~------ 144 (452)
T 3oc4_A 79 REVVAMDVENQLIAWTRKEEQ--------QWYSYDKLILATGASQFSTQIRGSQTEKLLKYKFLSGALAAVPLL------ 144 (452)
T ss_dssp CEEEEEETTTTEEEEEETTEE--------EEEECSEEEECCCCCBCCCCCBTTTCTTEEEGGGCC----CCHHH------
T ss_pred CEEEEEECCCCEEEEEecCce--------EEEEcCEEEECCCcccCCCCCCCCCCCCEEEeCCHHHHHHHHHHH------
Confidence 689999999999887522223 3899999999999999999999986 4566666665555544432
Q ss_pred cCCCCCCHhhhcccCeEEEECCChHHHHHHHHHHHHHHHHHHhhhcCCCCccEEEEEeCC-CCCCC-CcHHHHHHHHHHh
Q 018704 217 SDVPGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN-EILSS-FDDRLRHYATTQL 294 (351)
Q Consensus 217 ~~~p~~~~~~~~~~~~v~VvGgG~~a~e~a~~l~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~l~~-~~~~~~~~~~~~l 294 (351)
...++++|||+|.+|+|+|..+.+++ .+|+++++. .+++. +++++.+.+.+.+
T Consensus 145 -----------~~~~~vvViGgG~~g~E~A~~l~~~g--------------~~Vtlv~~~~~~l~~~~d~~~~~~l~~~l 199 (452)
T 3oc4_A 145 -----------ENSQTVAVIGAGPIGMEAIDFLVKMK--------------KTVHVFESLENLLPKYFDKEMVAEVQKSL 199 (452)
T ss_dssp -----------HTCSEEEEECCSHHHHHHHHHHHHTT--------------CEEEEEESSSSSSTTTCCHHHHHHHHHHH
T ss_pred -----------hcCCEEEEECCCHHHHHHHHHHHhCC--------------CeEEEEEccCccccccCCHHHHHHHHHHH
Confidence 23469999999999999999999887 899999997 46665 8999999999999
Q ss_pred hhcCcEEEcCe-EEEEe--CCe--EEecCCcEEeccEEEEecCCCCc-cccccCCCCCCCCC
Q 018704 295 SKSGVRLVRGI-VKDVD--SQK--LILNDGTEVPYGLLVWSTGVGPS-TLVKSLDLPKSPGG 350 (351)
Q Consensus 295 ~~~gV~~~~~~-v~~v~--~~~--v~~~~g~~~~~D~vi~a~G~~p~-~~~~~~gl~~~~~G 350 (351)
++.||+++.+. |++++ +++ +.+.+| ++++|.||+|+|++|+ ++++.. ++++++|
T Consensus 200 ~~~GV~i~~~~~v~~i~~~~~~v~v~~~~g-~i~aD~Vv~A~G~~p~~~~l~~~-~~~~~~g 259 (452)
T 3oc4_A 200 EKQAVIFHFEETVLGIEETANGIVLETSEQ-EISCDSGIFALNLHPQLAYLDKK-IQRNLDQ 259 (452)
T ss_dssp HTTTEEEEETCCEEEEEECSSCEEEEESSC-EEEESEEEECSCCBCCCSSCCTT-SCBCTTS
T ss_pred HHcCCEEEeCCEEEEEEccCCeEEEEECCC-EEEeCEEEECcCCCCChHHHHhh-hccCCCC
Confidence 99999999995 99987 333 566666 8999999999999999 776653 6666555
No 18
>1nhp_A NADH peroxidase; oxidoreductase (H2O2(A)); HET: FAD; 2.00A {Enterococcus faecalis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1npx_A* 1joa_A* 2npx_A* 1nhq_A* 1nhs_A* 1nhr_A* 1f8w_A*
Probab=99.97 E-value=5.1e-30 Score=244.05 Aligned_cols=247 Identities=21% Similarity=0.319 Sum_probs=186.4
Q ss_pred CcEEEECCchhHHHHHHhhhcc--CceEEEEcCCCccccchh-hhhhhcccc-cccccccchhccchhhhcCCCeEE-EE
Q 018704 63 PRVVVLGSGWAGCRLMKGIDTS--LYDVVCVSPRNHMVFTPL-LASTCVGTL-EFRSVAEPIARIQPAISREPGSYF-FL 137 (351)
Q Consensus 63 ~~VvIIG~G~aGl~aA~~L~~~--g~~v~vie~~~~~~~~~~-~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~-~~ 137 (351)
+||+|||||+||+++|..|++. |.+|+|||+++...|.+. +.....+.. ....+.. .....+. ..++.+ ..
T Consensus 1 ~dvvIIG~G~aGl~aA~~l~~~~~g~~V~lie~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~-~~gv~~~~~ 76 (447)
T 1nhp_A 1 MKVIVLGSSHGGYEAVEELLNLHPDAEIQWYEKGDFISFLSAGMQLYLEGKVKDVNSVRY---MTGEKME-SRGVNVFSN 76 (447)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCTTSEEEEEESSSSSSBCGGGHHHHHTTSSCCGGGSBS---CCHHHHH-HTTCEEEET
T ss_pred CeEEEECCCHHHHHHHHHHHHhCcCCeEEEEECCCccCcccccchhhhcCccCCHHHhhc---CCHHHHH-HCCCEEEEC
Confidence 4899999999999999999997 999999999987665432 221222221 1121111 1112222 236666 55
Q ss_pred EEeeeEeCCCCEEEEEeecCccccCCCceeEeeccEEEEecCCCcCCCCCCCcc-ccccccCCHHHHHHHHHHHHHhhhc
Q 018704 138 SHCAGIDTDNHVVHCETVTDELRTLEPWKFKISYDKLVIALGAEASTFGIHGVK-ENATFLREVHHAQEIRRKLLLNLML 216 (351)
Q Consensus 138 ~~v~~i~~~~~~v~~~~~~~~~~~~~~~~~~~~~d~lviAtG~~p~~p~i~g~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 216 (351)
..|..++.+.+.+.+....+++ ..++.||+||||||+.|+.|++||.+ +++++++++.++..+.+.+.
T Consensus 77 ~~v~~i~~~~~~v~~~~~~~g~------~~~~~~d~lviAtG~~p~~p~i~G~~~~~v~~~~~~~~~~~l~~~~~----- 145 (447)
T 1nhp_A 77 TEITAIQPKEHQVTVKDLVSGE------ERVENYDKLIISPGAVPFELDIPGKDLDNIYLMRGRQWAIKLKQKTV----- 145 (447)
T ss_dssp EEEEEEETTTTEEEEEETTTCC------EEEEECSEEEECCCEEECCCCSTTTTSBSEECCCHHHHHHHHHHHHT-----
T ss_pred CEEEEEeCCCCEEEEEecCCCc------eEEEeCCEEEEcCCCCcCCCCCCCCCCCCeEEECCHHHHHHHHHHhh-----
Confidence 7899999999988875433343 12589999999999999999999986 45777777878777766541
Q ss_pred cCCCCCCHhhhcccCeEEEECCChHHHHHHHHHHHHHHHHHHhhhcCCCCccEEEEEeCCC-CCC-CCcHHHHHHHHHHh
Q 018704 217 SDVPGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANE-ILS-SFDDRLRHYATTQL 294 (351)
Q Consensus 217 ~~~p~~~~~~~~~~~~v~VvGgG~~a~e~a~~l~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~l~-~~~~~~~~~~~~~l 294 (351)
....++++|||+|.+|+|+|..+.+++ .+|+++++.+ +++ .+++++.+.+.+.+
T Consensus 146 ----------~~~~~~vvIiG~G~~g~e~A~~l~~~g--------------~~Vtlv~~~~~~l~~~~~~~~~~~l~~~l 201 (447)
T 1nhp_A 146 ----------DPEVNNVVVIGSGYIGIEAAEAFAKAG--------------KKVTVIDILDRPLGVYLDKEFTDVLTEEM 201 (447)
T ss_dssp ----------CTTCCEEEEECCSHHHHHHHHHHHHTT--------------CEEEEEESSSSTTTTTCCHHHHHHHHHHH
T ss_pred ----------hcCCCeEEEECCCHHHHHHHHHHHHCC--------------CeEEEEecCcccccccCCHHHHHHHHHHH
Confidence 013469999999999999999999877 8999999974 566 58899999999999
Q ss_pred hhcCcEEEcCe-EEEEeCC----eEEecCCcEEeccEEEEecCCCCc-cccccCCCCCCCCC
Q 018704 295 SKSGVRLVRGI-VKDVDSQ----KLILNDGTEVPYGLLVWSTGVGPS-TLVKSLDLPKSPGG 350 (351)
Q Consensus 295 ~~~gV~~~~~~-v~~v~~~----~v~~~~g~~~~~D~vi~a~G~~p~-~~~~~~gl~~~~~G 350 (351)
++.||+++.+. |++++.+ .+.+ +|.++++|.||+|+|++|+ ++++.+ ++++++|
T Consensus 202 ~~~gv~i~~~~~v~~i~~~~~v~~v~~-~~~~i~~d~vi~a~G~~p~~~~~~~~-~~~~~~G 261 (447)
T 1nhp_A 202 EANNITIATGETVERYEGDGRVQKVVT-DKNAYDADLVVVAVGVRPNTAWLKGT-LELHPNG 261 (447)
T ss_dssp HTTTEEEEESCCEEEEECSSBCCEEEE-SSCEEECSEEEECSCEEESCGGGTTT-SCBCTTS
T ss_pred HhCCCEEEcCCEEEEEEccCcEEEEEE-CCCEEECCEEEECcCCCCChHHHHhh-hhhcCCC
Confidence 99999999995 9998764 2444 5678999999999999999 788776 7666555
No 19
>2v3a_A Rubredoxin reductase; alkane degradation, NADH oxidoreductase, rubredoxin reductas NAD, flavoprotein, oxidoreductase; HET: FAD; 2.4A {Pseudomonas aeruginosa} PDB: 2v3b_A*
Probab=99.97 E-value=1.5e-30 Score=242.89 Aligned_cols=239 Identities=19% Similarity=0.349 Sum_probs=185.9
Q ss_pred CCcEEEECCchhHHHHHHhhhccC--ceEEEEcCCCccccc-hhhhhhhcccccccccccch-hccchhhhcCCCeEEEE
Q 018704 62 KPRVVVLGSGWAGCRLMKGIDTSL--YDVVCVSPRNHMVFT-PLLASTCVGTLEFRSVAEPI-ARIQPAISREPGSYFFL 137 (351)
Q Consensus 62 ~~~VvIIG~G~aGl~aA~~L~~~g--~~v~vie~~~~~~~~-~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 137 (351)
++||+|||||+||+++|..|++.| .+|+|+|++....|. +.+......... ...+ ......+....++.++.
T Consensus 4 ~~dvvIIG~G~aGl~aA~~l~~~g~~~~V~lie~~~g~~~~~~~l~~~~~~~~~----~~~~~~~~~~~~~~~~~v~~~~ 79 (384)
T 2v3a_A 4 RAPLVIIGTGLAGYNLAREWRKLDGETPLLMITADDGRSYSKPMLSTGFSKNKD----ADGLAMAEPGAMAEQLNARILT 79 (384)
T ss_dssp CCCEEEECCSHHHHHHHHHHHTTCSSSCEEEECSSCCCEECGGGGGGTTTTTCC----HHHHEEECHHHHHHHTTCEEEC
T ss_pred CCcEEEECChHHHHHHHHHHHhhCCCCCEEEEECCCCCccCcccccHHHhCCCC----HHHhhccCHHHHHHhCCcEEEe
Confidence 479999999999999999999988 569999998754443 333332211111 1111 11222233345677764
Q ss_pred -EEeeeEeCCCCEEEEEeecCccccCCCceeEeeccEEEEecCCCcCCCCCCCcc-ccccccCCHHHHHHHHHHHHHhhh
Q 018704 138 -SHCAGIDTDNHVVHCETVTDELRTLEPWKFKISYDKLVIALGAEASTFGIHGVK-ENATFLREVHHAQEIRRKLLLNLM 215 (351)
Q Consensus 138 -~~v~~i~~~~~~v~~~~~~~~~~~~~~~~~~~~~d~lviAtG~~p~~p~i~g~~-~~~~~~~~~~~~~~~~~~~~~~~~ 215 (351)
.+|..++.+.+.+.+ ++. .+.||+||+|||+.|+.|++||.+ +.+++.+++.++..+++.+
T Consensus 80 ~~~v~~i~~~~~~v~~----~~~--------~~~~d~lviAtG~~p~~p~i~g~~~~~v~~~~~~~~~~~~~~~~----- 142 (384)
T 2v3a_A 80 HTRVTGIDPGHQRIWI----GEE--------EVRYRDLVLAWGAEPIRVPVEGDAQDALYPINDLEDYARFRQAA----- 142 (384)
T ss_dssp SCCCCEEEGGGTEEEE----TTE--------EEECSEEEECCCEEECCCCCBSTTTTCEEECSSHHHHHHHHHHH-----
T ss_pred CCEEEEEECCCCEEEE----CCc--------EEECCEEEEeCCCCcCCCCCCCcCcCCEEEECCHHHHHHHHHhh-----
Confidence 578999988887765 233 799999999999999999999976 5678888888888777654
Q ss_pred ccCCCCCCHhhhcccCeEEEECCChHHHHHHHHHHHHHHHHHHhhhcCCCCccEEEEEeCCC-CCCC-CcHHHHHHHHHH
Q 018704 216 LSDVPGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANE-ILSS-FDDRLRHYATTQ 293 (351)
Q Consensus 216 ~~~~p~~~~~~~~~~~~v~VvGgG~~a~e~a~~l~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~l~~-~~~~~~~~~~~~ 293 (351)
...++++|||+|.+|+|+|..|.+++ .+|+++++.+ +++. +++.+.+.+.+.
T Consensus 143 ------------~~~~~v~ViGgG~~g~e~A~~l~~~g--------------~~Vtlv~~~~~~~~~~~~~~~~~~l~~~ 196 (384)
T 2v3a_A 143 ------------AGKRRVLLLGAGLIGCEFANDLSSGG--------------YQLDVVAPCEQVMPGLLHPAAAKAVQAG 196 (384)
T ss_dssp ------------TTCCEEEEECCSHHHHHHHHHHHHTT--------------CEEEEEESSSSSSTTTSCHHHHHHHHHH
T ss_pred ------------ccCCeEEEECCCHHHHHHHHHHHhCC--------------CeEEEEecCcchhhcccCHHHHHHHHHH
Confidence 23469999999999999999999887 8999999974 5555 488899999999
Q ss_pred hhhcCcEEEcCe-EEEEeC--C--eEEecCCcEEeccEEEEecCCCCc-cccccCCCCCC
Q 018704 294 LSKSGVRLVRGI-VKDVDS--Q--KLILNDGTEVPYGLLVWSTGVGPS-TLVKSLDLPKS 347 (351)
Q Consensus 294 l~~~gV~~~~~~-v~~v~~--~--~v~~~~g~~~~~D~vi~a~G~~p~-~~~~~~gl~~~ 347 (351)
+++.||+++.+. |++++. + .+.+.+|+++++|.||+|+|++|+ ++++.+|++++
T Consensus 197 l~~~gv~i~~~~~v~~i~~~~~~~~v~~~~g~~i~~d~vv~a~G~~p~~~l~~~~g~~~~ 256 (384)
T 2v3a_A 197 LEGLGVRFHLGPVLASLKKAGEGLEAHLSDGEVIPCDLVVSAVGLRPRTELAFAAGLAVN 256 (384)
T ss_dssp HHTTTCEEEESCCEEEEEEETTEEEEEETTSCEEEESEEEECSCEEECCHHHHHTTCCBS
T ss_pred HHHcCCEEEeCCEEEEEEecCCEEEEEECCCCEEECCEEEECcCCCcCHHHHHHCCCCCC
Confidence 999999999995 988864 2 577788989999999999999999 68888888775
No 20
>3h8l_A NADH oxidase; membrane protein, complete form, rossman-like fold, oxidoreductase; HET: FAD; 2.57A {Acidianus ambivalens} PDB: 3h8i_A*
Probab=99.97 E-value=1.9e-30 Score=244.30 Aligned_cols=247 Identities=20% Similarity=0.295 Sum_probs=194.5
Q ss_pred CcEEEECCchhHHHHHHhhhc---cCceEEEEcCCCccccchhhhhhhcccccccccccchhccchhhhcCCCeEEEEEE
Q 018704 63 PRVVVLGSGWAGCRLMKGIDT---SLYDVVCVSPRNHMVFTPLLASTCVGTLEFRSVAEPIARIQPAISREPGSYFFLSH 139 (351)
Q Consensus 63 ~~VvIIG~G~aGl~aA~~L~~---~g~~v~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 139 (351)
++|||||||++||++|..|++ .|++|+|||+++.+.+.+.+.....+......+...+.+. ....++.++..+
T Consensus 2 ~~VvIIGgG~aGl~aA~~L~~~~~~g~~V~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~gv~~~~~~ 77 (409)
T 3h8l_A 2 TKVLVLGGRFGALTAAYTLKRLVGSKADVKVINKSRFSYFRPALPHVAIGVRDVDELKVDLSEA----LPEKGIQFQEGT 77 (409)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHHGGGSEEEEEESSSEEEECCSSCCCCSSCCCCCCEEEEHHHH----TGGGTCEEEECE
T ss_pred CeEEEECCCHHHHHHHHHHHhhCCCCCeEEEEeCCCCceeccchhhcccCCcCHHHHHHHHHHH----HhhCCeEEEEee
Confidence 589999999999999999999 8999999999998888776655444444444333333332 334478888889
Q ss_pred eeeEeCCCCEEEEEeecCccccCCCceeEeeccEEEEecCCCcCCCCCCCccccccccCCHHHHHHHHHHHHHhhhccCC
Q 018704 140 CAGIDTDNHVVHCETVTDELRTLEPWKFKISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDV 219 (351)
Q Consensus 140 v~~i~~~~~~v~~~~~~~~~~~~~~~~~~~~~d~lviAtG~~p~~p~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 219 (351)
|+.++.+.+.+.+... .+. ..++.||+||+|||..|+.|.+||+++...++.+..++..+++.+..
T Consensus 78 v~~i~~~~~~V~~~~g-~~~------~~~~~~d~lViAtG~~~~~~~ipG~~~~~~~~~~~~~~~~~~~~l~~------- 143 (409)
T 3h8l_A 78 VEKIDAKSSMVYYTKP-DGS------MAEEEYDYVIVGIGAHLATELVKGWDKYGYSVCEPEFATKLREKLES------- 143 (409)
T ss_dssp EEEEETTTTEEEEECT-TSC------EEEEECSEEEECCCCEECGGGSBTHHHHCEESSSTTHHHHHHHHHHH-------
T ss_pred EEEEeCCCCEEEEccC-Ccc------cceeeCCEEEECCCCCcCccCCCChhhcCcCcCCHHHHHHHHHHHHH-------
Confidence 9999999998877531 111 23699999999999999999999987667777788888888877632
Q ss_pred CCCCHhhhcccCeEEEECCC-------------------h------HHHHHHHHHHHHHHHHHHhhhcCCCCccEEEEEe
Q 018704 220 PGISEEEKSRLLHCVVVGGG-------------------P------TGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIE 274 (351)
Q Consensus 220 p~~~~~~~~~~~~v~VvGgG-------------------~------~a~e~a~~l~~~~~~~~~~~~~~~~~~~~v~~~~ 274 (351)
..++++|||+| . .++|+|..+..... + ...+++.+|++++
T Consensus 144 ---------~~~~~vViG~G~f~~~~~~~~~~p~~~~p~~~~~~~~~~~e~a~~~~~~l~----~--~g~~~~~~v~~~~ 208 (409)
T 3h8l_A 144 ---------FQGGNIAIGSGPFYQGHNPKPKVPENFVPNADSACEGPVFEMSLMLHGYFK----K--KGMLDKVHVTVFS 208 (409)
T ss_dssp ---------CCSEEEEEEECCBCCCCSSCCBSCTTSSCCCSCSSCHHHHHHHHHHHHHHH----T--TTCTTTEEEEEEC
T ss_pred ---------hcCCeEEEEecccccCCCccccccccccCCCCcccCCHHHHHHHHHHHHHH----H--cCCCCCeEEEEEe
Confidence 11367899999 2 47888877654321 1 1112346999999
Q ss_pred CCCCCCCCcHHHHHHHHHHhhhcCcEEEcCe-EEEEeCCeEEecCCcEEeccEEEEecCCCCccccccC
Q 018704 275 ANEILSSFDDRLRHYATTQLSKSGVRLVRGI-VKDVDSQKLILNDGTEVPYGLLVWSTGVGPSTLVKSL 342 (351)
Q Consensus 275 ~~~~l~~~~~~~~~~~~~~l~~~gV~~~~~~-v~~v~~~~v~~~~g~~~~~D~vi~a~G~~p~~~~~~~ 342 (351)
+.+.++.+++.+.+.+.+.+++.||+++++. |++++.+++++++|+++++|.||+|+|++|+++++.+
T Consensus 209 ~~~~l~~~~~~~~~~~~~~l~~~gV~~~~~~~v~~i~~~~v~~~~g~~~~~D~vi~a~G~~~~~~l~~~ 277 (409)
T 3h8l_A 209 PGEYLSDLSPNSRKAVASIYNQLGIKLVHNFKIKEIREHEIVDEKGNTIPADITILLPPYTGNPALKNS 277 (409)
T ss_dssp SSSSSTTBCHHHHHHHHHHHHHHTCEEECSCCEEEECSSEEEETTSCEEECSEEEEECCEECCHHHHTS
T ss_pred CCccccccCHHHHHHHHHHHHHCCCEEEcCCceEEECCCeEEECCCCEEeeeEEEECCCCCccHHHHhc
Confidence 9887788889999999999999999999995 9999999999999999999999999999999888777
No 21
>3hyw_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3hyv_A* 3hyx_A*
Probab=99.97 E-value=5.4e-30 Score=242.55 Aligned_cols=248 Identities=25% Similarity=0.341 Sum_probs=190.7
Q ss_pred CcEEEECCchhHHHHHHhhhccC--ceEEEEcCCCccccchhhhhhhcccccccccccchhccchhhhcCCCeEEEEEEe
Q 018704 63 PRVVVLGSGWAGCRLMKGIDTSL--YDVVCVSPRNHMVFTPLLASTCVGTLEFRSVAEPIARIQPAISREPGSYFFLSHC 140 (351)
Q Consensus 63 ~~VvIIG~G~aGl~aA~~L~~~g--~~v~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 140 (351)
++|||||||+||++||.+|++.+ ++|||||+++++.|.|.++....|.....++..++... ....++.++.++|
T Consensus 3 K~VvIIGgG~aGl~aA~~L~~~~~~~~VtlI~~~~~~~~~p~l~~v~~g~~~~~~i~~~~~~~----~~~~gv~~i~~~v 78 (430)
T 3hyw_A 3 KHVVVIGGGVGGIATAYNLRNLMPDLKITLISDRPYFGFTPAFPHLAMGWRKFEDISVPLAPL----LPKFNIEFINEKA 78 (430)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCTTCEEEEECSSSEEECGGGHHHHHHTCSCGGGSEEESTTT----GGGGTEEEECSCE
T ss_pred CcEEEECCCHHHHHHHHHHhccCcCCeEEEEcCCCCCccCccHHHHhcCCCCHHHhhhcHHHH----HHHCCcEEEEeEE
Confidence 68999999999999999999854 78999999999999999998888887776665555544 3345899999999
Q ss_pred eeEeCCCCEEEEEeecCccccCCCceeEeeccEEEEecCCCcCCCCCCCccccccccCCHHHHHHHHHHHHHhhhccCCC
Q 018704 141 AGIDTDNHVVHCETVTDELRTLEPWKFKISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVP 220 (351)
Q Consensus 141 ~~i~~~~~~v~~~~~~~~~~~~~~~~~~~~~d~lviAtG~~p~~p~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p 220 (351)
+.||++.+.+.+ ++|+ ++.||+||||||+.+. +++||.+++.+.+++++++..+++++...
T Consensus 79 ~~Id~~~~~V~~---~~g~--------~i~YD~LViAtG~~~~-~~i~G~~e~~~~~~~~~~a~~~~~~l~~~------- 139 (430)
T 3hyw_A 79 ESIDPDANTVTT---QSGK--------KIEYDYLVIATGPKLV-FGAEGQEENSTSICTAEHALETQKKLQEL------- 139 (430)
T ss_dssp EEEETTTTEEEE---TTCC--------EEECSEEEECCCCEEE-CCSBTHHHHSCCCSSHHHHHHHHHHHHHH-------
T ss_pred EEEECCCCEEEE---CCCC--------EEECCEEEEeCCCCcc-CCccCcccCcCCcccHHHHHHHHHHHHhh-------
Confidence 999999999976 4666 8999999999999865 46899888888899999999988877432
Q ss_pred CCCHhhhcccCeEEEECCCh------HHHHHHHHHHHHHHHHHHhhhcCCCCccEEEEEeCCCCCC----CCcHHHHHHH
Q 018704 221 GISEEEKSRLLHCVVVGGGP------TGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEILS----SFDDRLRHYA 290 (351)
Q Consensus 221 ~~~~~~~~~~~~v~VvGgG~------~a~e~a~~l~~~~~~~~~~~~~~~~~~~~v~~~~~~~~l~----~~~~~~~~~~ 290 (351)
...+.++|+||+. .+.|++..+... +.++ ..+.+.+|++++..+.+. ...+...+.+
T Consensus 140 -------~~~~~~vv~gg~~gve~~~~~~e~a~~~~~~----l~~~--g~~~~v~v~~~~~~~~l~~~~~~~~~~~~~~l 206 (430)
T 3hyw_A 140 -------YANPGPVVIGAIPGVSCFGPAYEFALMLHYE----LKKR--GIRYKVPMTFITSEPYLGHFGVGGIGASKRLV 206 (430)
T ss_dssp -------HHSCCCEEEEECTTCCCCHHHHHHHHHHHHH----HHHT--TCGGGCCEEEECSSSSTTCTTTTCSTTHHHHH
T ss_pred -------ccCCceEEEeCCCcEEEhHHHHHHHHHHHHH----HHHh--cccccceeeeecccchhhhccchhhHHHHHHH
Confidence 1222456666553 223443333321 2221 223457899998875443 3446677888
Q ss_pred HHHhhhcCcEEEcCe-EEEEeCCeEEecC----CcEEeccEEEEecCCCCccccccCCCCC
Q 018704 291 TTQLSKSGVRLVRGI-VKDVDSQKLILND----GTEVPYGLLVWSTGVGPSTLVKSLDLPK 346 (351)
Q Consensus 291 ~~~l~~~gV~~~~~~-v~~v~~~~v~~~~----g~~~~~D~vi~a~G~~p~~~~~~~gl~~ 346 (351)
++.++++||+++++. |++++.+++.+++ ++++++|.+++++|++|++++...++.+
T Consensus 207 ~~~l~~~GV~~~~~~~v~~v~~~~~~~~~~~g~~~~i~~d~vi~~~G~~~~~~~~~~~~~l 267 (430)
T 3hyw_A 207 EDLFAERNIDWIANVAVKAIEPDKVIYEDLNGNTHEVPAKFTMFMPSFQGPEVVASAGDKV 267 (430)
T ss_dssp HHHHHHTTCEEECSCEEEEECSSEEEEECTTSCEEEEECSEEEEECEEECCHHHHTTCTTT
T ss_pred HHHHHhCCeEEEeCceEEEEeCCceEEEeeCCCceEeecceEEEeccCCCchHHHhccccc
Confidence 899999999999995 9999999888764 3479999999999999998777665443
No 22
>1m6i_A Programmed cell death protein 8; apoptosis, AIF, oxidoreductase; HET: FAD; 1.80A {Homo sapiens} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 3gd3_A* 3gd4_A* 1gv4_A*
Probab=99.97 E-value=1.5e-29 Score=243.41 Aligned_cols=250 Identities=18% Similarity=0.288 Sum_probs=182.8
Q ss_pred CCCcEEEECCchhHHHHHHhhhcc--CceEEEEcCCCccccc-hhhhhhh-ccccc-------cccc--------ccchh
Q 018704 61 EKPRVVVLGSGWAGCRLMKGIDTS--LYDVVCVSPRNHMVFT-PLLASTC-VGTLE-------FRSV--------AEPIA 121 (351)
Q Consensus 61 ~~~~VvIIG~G~aGl~aA~~L~~~--g~~v~vie~~~~~~~~-~~~~~~~-~~~~~-------~~~~--------~~~~~ 121 (351)
..+||||||||+||++||..|++. +.+|+|||+++++.|. +.+.... .+... +..+ .....
T Consensus 10 ~~~~vvIIGgG~AGl~aA~~L~~~~~g~~V~lie~~~~~~y~r~~lsk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 89 (493)
T 1m6i_A 10 SHVPFLLIGGGTAAFAAARSIRARDPGARVLIVSEDPELPYMRPPLSKELWFSDDPNVTKTLRFKQWNGKERSIYFQPPS 89 (493)
T ss_dssp SEEEEEEESCSHHHHHHHHHHHHHSTTCEEEEEESSSSCCBCSGGGGTGGGCC--CTHHHHCEEECTTSCEEESBSSCGG
T ss_pred CcCCEEEECChHHHHHHHHHHHhcCCCCeEEEEeCCCCCCCCCCCCCHHhhcCCccchhhcccccccccccccccccchH
Confidence 457999999999999999999876 8899999999877654 2221111 11000 0000 00000
Q ss_pred ccc--hhhh--cCCCeEEEEE-EeeeEeCCCCEEEEEeecCccccCCCceeEeeccEEEEecCCCcCCCCCCCc-----c
Q 018704 122 RIQ--PAIS--REPGSYFFLS-HCAGIDTDNHVVHCETVTDELRTLEPWKFKISYDKLVIALGAEASTFGIHGV-----K 191 (351)
Q Consensus 122 ~~~--~~~~--~~~~~~~~~~-~v~~i~~~~~~v~~~~~~~~~~~~~~~~~~~~~d~lviAtG~~p~~p~i~g~-----~ 191 (351)
.+. ..+. ...++.++.. +|+.++.+.+.+.+ .++. ++.||+||||||+.|+.|++++. .
T Consensus 90 ~~~~~~~l~~~~~~gv~~~~g~~v~~id~~~~~V~~---~~g~--------~i~yd~lviATGs~p~~~~~~~~~~~~~~ 158 (493)
T 1m6i_A 90 FYVSAQDLPHIENGGVAVLTGKKVVQLDVRDNMVKL---NDGS--------QITYEKCLIATGGTPRSLSAIDRAGAEVK 158 (493)
T ss_dssp GSBCTTTTTTSTTCEEEEEETCCEEEEEGGGTEEEE---TTSC--------EEEEEEEEECCCEEECCCHHHHTSCHHHH
T ss_pred hhcchhhhhhhhcCCeEEEcCCEEEEEECCCCEEEE---CCCC--------EEECCEEEECCCCCCCCCCCccccccccc
Confidence 000 0111 1346777775 89999998888766 4565 89999999999999988776552 1
Q ss_pred ccccccCCHHHHHHHHHHHHHhhhccCCCCCCHhhhcccCeEEEECCChHHHHHHHHHHHHHHHHHHhhhcCCCCccEEE
Q 018704 192 ENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVT 271 (351)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~v~VvGgG~~a~e~a~~l~~~~~~~~~~~~~~~~~~~~v~ 271 (351)
+.++.+++..++..+.+.+ ...++++|||||.+|+|+|..|.+.+.+ .+.+|+
T Consensus 159 ~~v~~~~~~~d~~~l~~~~-----------------~~~~~vvViGgG~iG~E~A~~l~~~~~~----------~g~~V~ 211 (493)
T 1m6i_A 159 SRTTLFRKIGDFRSLEKIS-----------------REVKSITIIGGGFLGSELACALGRKARA----------LGTEVI 211 (493)
T ss_dssp HTEEECCSHHHHHHHHHHH-----------------HHCSEEEEECCSHHHHHHHHHHHHHHHH----------HTCEEE
T ss_pred CceEEEcCHHHHHHHHHHh-----------------hcCCeEEEECCCHHHHHHHHHHHhhhhh----------cCCEEE
Confidence 3456677888888777654 2346999999999999999999875421 127899
Q ss_pred EEeCCC--CCCCCcHHHHHHHHHHhhhcCcEEEcCe-EEEEeC--C--eEEecCCcEEeccEEEEecCCCCc-cccccCC
Q 018704 272 LIEANE--ILSSFDDRLRHYATTQLSKSGVRLVRGI-VKDVDS--Q--KLILNDGTEVPYGLLVWSTGVGPS-TLVKSLD 343 (351)
Q Consensus 272 ~~~~~~--~l~~~~~~~~~~~~~~l~~~gV~~~~~~-v~~v~~--~--~v~~~~g~~~~~D~vi~a~G~~p~-~~~~~~g 343 (351)
++++.. +.+.+++.+.+.+.+.+++.||+++++. |++++. + .+++.+|++++||.||+|+|++|+ ++++.+|
T Consensus 212 ~v~~~~~~~~~~l~~~~~~~~~~~l~~~GV~v~~~~~V~~i~~~~~~~~v~l~dG~~i~aD~Vv~a~G~~pn~~l~~~~g 291 (493)
T 1m6i_A 212 QLFPEKGNMGKILPEYLSNWTMEKVRREGVKVMPNAIVQSVGVSSGKLLIKLKDGRKVETDHIVAAVGLEPNVELAKTGG 291 (493)
T ss_dssp EECSSSSTTTTTSCHHHHHHHHHHHHTTTCEEECSCCEEEEEEETTEEEEEETTSCEEEESEEEECCCEEECCTTHHHHT
T ss_pred EEecCcccccccCCHHHHHHHHHHHHhcCCEEEeCCEEEEEEecCCeEEEEECCCCEEECCEEEECCCCCccHHHHHHcC
Confidence 998864 2345678889999999999999999994 998864 2 477889999999999999999999 7888888
Q ss_pred CCCCC
Q 018704 344 LPKSP 348 (351)
Q Consensus 344 l~~~~ 348 (351)
+++++
T Consensus 292 l~~~~ 296 (493)
T 1m6i_A 292 LEIDS 296 (493)
T ss_dssp CCBCT
T ss_pred Ccccc
Confidence 88875
No 23
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=99.97 E-value=3.7e-30 Score=231.32 Aligned_cols=231 Identities=16% Similarity=0.206 Sum_probs=167.2
Q ss_pred CCcEEEECCchhHHHHHHhhhccCceEEEEcCCCccccchhhhhhhcccccc--cccccchhccchhhhcCCCeEEEEEE
Q 018704 62 KPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRNHMVFTPLLASTCVGTLEF--RSVAEPIARIQPAISREPGSYFFLSH 139 (351)
Q Consensus 62 ~~~VvIIG~G~aGl~aA~~L~~~g~~v~vie~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~ 139 (351)
++||+|||||++||++|..|++.|++|+|||++......+... .+.+.. .............+....++.++..+
T Consensus 2 ~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~ 78 (297)
T 3fbs_A 2 KFDVIIIGGSYAGLSAALQLGRARKNILLVDAGERRNRFASHS---HGFLGQDGKAPGEIIAEARRQIERYPTIHWVEGR 78 (297)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEEECCCCGGGGCSCC---CSSTTCTTCCHHHHHHHHHHHHTTCTTEEEEESC
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCCEEEEeCCCcccccchhh---cCCcCCCCCCHHHHHHHHHHHHHhcCCeEEEEeE
Confidence 4799999999999999999999999999999875432111110 011111 11112222333334444578888889
Q ss_pred eeeEeCCCCEEEEEeecCccccCCCceeEeeccEEEEecCCCcCCCCCCCcccc---ccccCCHHHHHHHHHHHHHhhhc
Q 018704 140 CAGIDTDNHVVHCETVTDELRTLEPWKFKISYDKLVIALGAEASTFGIHGVKEN---ATFLREVHHAQEIRRKLLLNLML 216 (351)
Q Consensus 140 v~~i~~~~~~v~~~~~~~~~~~~~~~~~~~~~d~lviAtG~~p~~p~i~g~~~~---~~~~~~~~~~~~~~~~~~~~~~~ 216 (351)
|+.++.+.+.+.+.. .++. ++.||+||+|||..|+.|.+||.+.. ..+...+.+.
T Consensus 79 v~~i~~~~~~~~v~~-~~g~--------~~~~d~vviAtG~~~~~~~~~g~~~~~~~~~~~~~~~~~------------- 136 (297)
T 3fbs_A 79 VTDAKGSFGEFIVEI-DGGR--------RETAGRLILAMGVTDELPEIAGLRERWGSAVFHCPYCHG------------- 136 (297)
T ss_dssp EEEEEEETTEEEEEE-TTSC--------EEEEEEEEECCCCEEECCCCBTTGGGBTTTEESCHHHHT-------------
T ss_pred EEEEEEcCCeEEEEE-CCCC--------EEEcCEEEECCCCCCCCCCCCCchhhcCCeeEEcccCcc-------------
Confidence 999998877776654 4555 89999999999999999999997531 1111111110
Q ss_pred cCCCCCCHhhhcccCeEEEECCChHHHHHHHHHHHHHHHHHHhhhcCCCCccEEEEEeCCCCCCCCcHHHHHHHHHHhhh
Q 018704 217 SDVPGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEILSSFDDRLRHYATTQLSK 296 (351)
Q Consensus 217 ~~~p~~~~~~~~~~~~v~VvGgG~~a~e~a~~l~~~~~~~~~~~~~~~~~~~~v~~~~~~~~l~~~~~~~~~~~~~~l~~ 296 (351)
.....++++|||+|++|+|+|..|.+. + +|+++++... .+ .+.+.+.+++
T Consensus 137 ---------~~~~~~~v~vvG~G~~~~e~a~~l~~~--------------g-~v~~v~~~~~--~~----~~~~~~~l~~ 186 (297)
T 3fbs_A 137 ---------YELDQGKIGVIAASPMAIHHALMLPDW--------------G-ETTFFTNGIV--EP----DADQHALLAA 186 (297)
T ss_dssp ---------GGGTTCEEEEECCSTTHHHHHHHGGGT--------------S-EEEEECTTTC--CC----CHHHHHHHHH
T ss_pred ---------hhhcCCEEEEEecCccHHHHHHHhhhc--------------C-cEEEEECCCC--CC----CHHHHHHHHH
Confidence 002346999999999999999988753 3 8999998643 22 2345677888
Q ss_pred cCcEEEcCeEEEEeCC-eEEecCCcEEeccEEEEecCCCCc-cccccCCCCCC
Q 018704 297 SGVRLVRGIVKDVDSQ-KLILNDGTEVPYGLLVWSTGVGPS-TLVKSLDLPKS 347 (351)
Q Consensus 297 ~gV~~~~~~v~~v~~~-~v~~~~g~~~~~D~vi~a~G~~p~-~~~~~~gl~~~ 347 (351)
.||+++..+|++++.+ .+.+.+|+++++|.||+|+|++|+ +|++.++++++
T Consensus 187 ~gv~i~~~~v~~i~~~~~v~~~~g~~~~~D~vi~a~G~~p~~~~~~~~g~~~~ 239 (297)
T 3fbs_A 187 RGVRVETTRIREIAGHADVVLADGRSIALAGLFTQPKLRITVDWIEKLGCAVE 239 (297)
T ss_dssp TTCEEECSCEEEEETTEEEEETTSCEEEESEEEECCEEECCCSCHHHHTCCEE
T ss_pred CCcEEEcceeeeeecCCeEEeCCCCEEEEEEEEEccCcccCchhHHhcCCccc
Confidence 9999997569999887 899999999999999999999999 88888887765
No 24
>2wpf_A Trypanothione reductase; oxidoreductase, trypanosomiasis, sleeping sickness, flavoPro redox-active center; HET: FAD WPF; 1.90A {Trypanosoma brucei} PDB: 2wov_A* 2wow_A* 2wp5_A* 2wp6_A* 2wpc_A* 2wpe_A* 2woi_A* 2wba_A* 1nda_A* 1gxf_A* 1bzl_A* 1aog_A*
Probab=99.97 E-value=1.9e-29 Score=242.75 Aligned_cols=240 Identities=23% Similarity=0.300 Sum_probs=171.4
Q ss_pred CCcEEEECCchhHHHHHHhhhc-cCceEEEEcC--------CCccccchhhhhhh---------------------cccc
Q 018704 62 KPRVVVLGSGWAGCRLMKGIDT-SLYDVVCVSP--------RNHMVFTPLLASTC---------------------VGTL 111 (351)
Q Consensus 62 ~~~VvIIG~G~aGl~aA~~L~~-~g~~v~vie~--------~~~~~~~~~~~~~~---------------------~~~~ 111 (351)
++||+|||||++|+++|++|++ .|++|+|||+ ...+... +....| .+..
T Consensus 7 ~~dvvVIGgG~aGl~aA~~la~~~G~~V~liE~~~~~~~~~~~~~GG~-~~~~gciP~k~l~~~a~~~~~~~~~~~~g~~ 85 (495)
T 2wpf_A 7 AFDLVVIGAGSGGLEAGWNAATLYGKRVAVVDVQTSHGPPFYAALGGT-CVNVGCVPKKLMVTGAQYMDHLRESAGFGWE 85 (495)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHHHCCCEEEEESCSSSBTTTBCBTTHH-HHHHSHHHHHHHHHHHHHHHHHHHHHTTTEE
T ss_pred ccCEEEECCChhHHHHHHHHHHhcCCeEEEEecccccccccCCCCCCe-eecCCcchHHHHHHHHHHHHHHhHHHhcCcc
Confidence 4799999999999999999999 9999999992 2322111 000000 0000
Q ss_pred c-----ccccccch---hcc-------chhhhcCC-CeEEEEEEeeeEeCCCCEEEEEeecC-----ccccCCCceeEee
Q 018704 112 E-----FRSVAEPI---ARI-------QPAISREP-GSYFFLSHCAGIDTDNHVVHCETVTD-----ELRTLEPWKFKIS 170 (351)
Q Consensus 112 ~-----~~~~~~~~---~~~-------~~~~~~~~-~~~~~~~~v~~i~~~~~~v~~~~~~~-----~~~~~~~~~~~~~ 170 (351)
. ..++.... ... ........ ++.++...+..++. +.+.+....+ +. .+.
T Consensus 86 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~gv~~~~g~~~~i~~--~~v~v~~~~~~~~~~~~--------~~~ 155 (495)
T 2wpf_A 86 FDGSSVKANWKKLIAAKNEAVLDINKSYEGMFNDTEGLDFFLGWGSLESK--NVVVVRETADPKSAVKE--------RLQ 155 (495)
T ss_dssp CCGGGCEECHHHHHHHHHHHHHHHHHHHHHHHHHCTTEEEEESEEEEEET--TEEEEESSSSTTSCEEE--------EEE
T ss_pred cCCcccccCHHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEeEEEEeeC--CEEEEeecCCccCCCCe--------EEE
Confidence 0 00110000 000 01112234 88888888887764 6666642122 33 799
Q ss_pred ccEEEEecCCCcCCCCCCCccccccccCCHHHHHHHHHHHHHhhhccCCCCCCHhhhcccCeEEEECCChHHHHHHHHHH
Q 018704 171 YDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEKSRLLHCVVVGGGPTGVEFSGELS 250 (351)
Q Consensus 171 ~d~lviAtG~~p~~p~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~v~VvGgG~~a~e~a~~l~ 250 (351)
||+||||||+.|+.|++||. +.+++ ..++ +.+... .++++|||||.+|+|+|..|.
T Consensus 156 ~d~lViATGs~p~~p~i~G~-~~~~~---~~~~----------~~~~~~----------~~~vvViGgG~ig~E~A~~l~ 211 (495)
T 2wpf_A 156 ADHILLATGSWPQMPAIPGI-EHCIS---SNEA----------FYLPEP----------PRRVLTVGGGFISVEFAGIFN 211 (495)
T ss_dssp EEEEEECCCEEECCCCCTTG-GGCEE---HHHH----------TTCSSC----------CSEEEEECSSHHHHHHHHHHH
T ss_pred cCEEEEeCCCCcCCCCCCCc-ccccc---HHHH----------Hhhhhc----------CCeEEEECCCHHHHHHHHHHH
Confidence 99999999999999999997 33332 2221 112222 359999999999999999998
Q ss_pred HH---HHHHHHhhhcCCCCccEEEEEeCC-CCCCCCcHHHHHHHHHHhhhcCcEEEcCe-EEEEeCC-----eEEecCCc
Q 018704 251 DF---IMRDVRQRYSHVKDYIHVTLIEAN-EILSSFDDRLRHYATTQLSKSGVRLVRGI-VKDVDSQ-----KLILNDGT 320 (351)
Q Consensus 251 ~~---~~~~~~~~~~~~~~~~~v~~~~~~-~~l~~~~~~~~~~~~~~l~~~gV~~~~~~-v~~v~~~-----~v~~~~g~ 320 (351)
++ + .+|+++++. .+++.+++++.+.+.+.+++.||+++++. |.+++.+ .+.+.+|+
T Consensus 212 ~~~~~g--------------~~Vtlv~~~~~~l~~~d~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~~~~v~~~~G~ 277 (495)
T 2wpf_A 212 AYKPPG--------------GKVTLCYRNNLILRGFDETIREEVTKQLTANGIEIMTNENPAKVSLNTDGSKHVTFESGK 277 (495)
T ss_dssp HHCCTT--------------CEEEEEESSSSSCTTSCHHHHHHHHHHHHHTTCEEEESCCEEEEEECTTSCEEEEETTSC
T ss_pred hhCCCC--------------CeEEEEEcCCccccccCHHHHHHHHHHHHhCCCEEEeCCEEEEEEEcCCceEEEEECCCc
Confidence 87 6 899999997 57888999999999999999999999995 9888642 57778898
Q ss_pred EEeccEEEEecCCCCc-c-c-cccCCCCCCCCC
Q 018704 321 EVPYGLLVWSTGVGPS-T-L-VKSLDLPKSPGG 350 (351)
Q Consensus 321 ~~~~D~vi~a~G~~p~-~-~-~~~~gl~~~~~G 350 (351)
++++|.||+|+|++|+ + + ++.+|++++++|
T Consensus 278 ~i~~D~vv~a~G~~p~~~~L~l~~~gl~~~~~G 310 (495)
T 2wpf_A 278 TLDVDVVMMAIGRIPRTNDLQLGNVGVKLTPKG 310 (495)
T ss_dssp EEEESEEEECSCEEECCGGGTGGGTTCCBCTTS
T ss_pred EEEcCEEEECCCCcccccccchhhcCccCCCCC
Confidence 9999999999999999 5 3 678888887666
No 25
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=99.97 E-value=1.4e-29 Score=230.13 Aligned_cols=239 Identities=18% Similarity=0.222 Sum_probs=164.7
Q ss_pred CCCcEEEECCchhHHHHHHhhhccCceEEEEcCCCccccchhhhhhhcccccccc-cccchhccchhhhcCCCeEEEEEE
Q 018704 61 EKPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRNHMVFTPLLASTCVGTLEFRS-VAEPIARIQPAISREPGSYFFLSH 139 (351)
Q Consensus 61 ~~~~VvIIG~G~aGl~aA~~L~~~g~~v~vie~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 139 (351)
+++||+|||||++||++|+.|++.|++|+|||++ ..............+.+.. ....+...........++.++..+
T Consensus 14 ~~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~--~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~ 91 (323)
T 3f8d_A 14 EKFDVIIVGLGPAAYGAALYSARYMLKTLVIGET--PGGQLTEAGIVDDYLGLIEIQASDMIKVFNKHIEKYEVPVLLDI 91 (323)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESS--TTGGGGGCCEECCSTTSTTEEHHHHHHHHHHHHHTTTCCEEESC
T ss_pred CccCEEEECccHHHHHHHHHHHHCCCcEEEEecc--CCCeecccccccccCCCCCCCHHHHHHHHHHHHHHcCCEEEEEE
Confidence 3579999999999999999999999999999997 1110000000001111111 011222222233344466666689
Q ss_pred eeeEeCCCCEEEEEeecCccccCCCceeEeeccEEEEecCCCcCCCCCCCccc---cccccCCHHHHHHHHHHHHHhhhc
Q 018704 140 CAGIDTDNHVVHCETVTDELRTLEPWKFKISYDKLVIALGAEASTFGIHGVKE---NATFLREVHHAQEIRRKLLLNLML 216 (351)
Q Consensus 140 v~~i~~~~~~v~~~~~~~~~~~~~~~~~~~~~d~lviAtG~~p~~p~i~g~~~---~~~~~~~~~~~~~~~~~~~~~~~~ 216 (351)
|+.++.+.+.+.+.. .++. .+.||+||+|||+.|+.|.+||.+. ...+.....+ ..
T Consensus 92 v~~i~~~~~~~~v~~-~~g~--------~~~~d~lvlAtG~~~~~~~i~g~~~~~~~~~~~~~~~~-----~~------- 150 (323)
T 3f8d_A 92 VEKIENRGDEFVVKT-KRKG--------EFKADSVILGIGVKRRKLGVPGEQEFAGRGISYCSVAD-----AP------- 150 (323)
T ss_dssp EEEEEEC--CEEEEE-SSSC--------EEEEEEEEECCCCEECCCCCTTTTTTBTTTEESCHHHH-----GG-------
T ss_pred EEEEEecCCEEEEEE-CCCC--------EEEcCEEEECcCCCCccCCCCchhhhcCCceEEeccCC-----Hh-------
Confidence 999998877776654 3445 8999999999999999999999753 2222211111 00
Q ss_pred cCCCCCCHhhhcccCeEEEECCChHHHHHHHHHHHHHHHHHHhhhcCCCCccEEEEEeCCCCCCCCcHHHHHHHHHHhhh
Q 018704 217 SDVPGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEILSSFDDRLRHYATTQLSK 296 (351)
Q Consensus 217 ~~~p~~~~~~~~~~~~v~VvGgG~~a~e~a~~l~~~~~~~~~~~~~~~~~~~~v~~~~~~~~l~~~~~~~~~~~~~~l~~ 296 (351)
....++++|||+|.+|+|+|..|.+.+ .+|+++++...+.. ++. .+.+.+++
T Consensus 151 ----------~~~~~~v~vvG~G~~~~e~a~~l~~~g--------------~~v~~~~~~~~~~~-~~~---~~~~~~~~ 202 (323)
T 3f8d_A 151 ----------LFKNRVVAVIGGGDSALEGAEILSSYS--------------TKVYLIHRRDTFKA-QPI---YVETVKKK 202 (323)
T ss_dssp ----------GGTTCEEEEECCSHHHHHHHHHHHHHS--------------SEEEEECSSSSCCS-CHH---HHHHHHTC
T ss_pred ----------HcCCCEEEEECCCHHHHHHHHHHHHhC--------------CeEEEEEeCCCCCc-CHH---HHHHHHhC
Confidence 123469999999999999999999876 89999999753322 222 22333445
Q ss_pred cCcEEEcCe-EEEEeCC----eEEecC---Cc--EEeccEEEEecCCCCc-cccccCCCCCCCCC
Q 018704 297 SGVRLVRGI-VKDVDSQ----KLILND---GT--EVPYGLLVWSTGVGPS-TLVKSLDLPKSPGG 350 (351)
Q Consensus 297 ~gV~~~~~~-v~~v~~~----~v~~~~---g~--~~~~D~vi~a~G~~p~-~~~~~~gl~~~~~G 350 (351)
.||+++.+. |++++.+ ++++.+ |+ ++++|.||+|+|++|+ ++++.+|++++++|
T Consensus 203 ~gv~~~~~~~v~~i~~~~~~~~v~~~~~~~g~~~~~~~D~vv~a~G~~p~~~~~~~~g~~~~~~g 267 (323)
T 3f8d_A 203 PNVEFVLNSVVKEIKGDKVVKQVVVENLKTGEIKELNVNGVFIEIGFDPPTDFAKSNGIETDTNG 267 (323)
T ss_dssp TTEEEECSEEEEEEEESSSEEEEEEEETTTCCEEEEECSEEEECCCEECCHHHHHHTTCCBCTTS
T ss_pred CCcEEEeCCEEEEEeccCceeEEEEEECCCCceEEEEcCEEEEEECCCCChhHHhhcCeeecCCC
Confidence 599999995 9998765 477765 76 6899999999999999 99999999887766
No 26
>3sx6_A Sulfide-quinone reductase, putative; sulfide:quinone oxidoreductase, Cys356Ala variant, integral membrane protein; HET: FAD LMT DCQ; 1.80A {Acidithiobacillus ferrooxidans} PDB: 3t0k_A* 3szc_A* 3sz0_A* 3t2z_A* 3t31_A* 3sy4_A* 3syi_A* 3sxi_A* 3t14_A* 3t2k_A* 3szw_A* 3szf_A* 3kpg_A* 3kpi_A* 3t2y_A* 3kpk_A*
Probab=99.97 E-value=3.8e-29 Score=237.35 Aligned_cols=252 Identities=21% Similarity=0.276 Sum_probs=189.1
Q ss_pred CCcEEEECCchhHHHHHHhhhc---cCceEEEEcCCCccccchhhhhhhcccccccccccchhccchhhhcCCCeEEEEE
Q 018704 62 KPRVVVLGSGWAGCRLMKGIDT---SLYDVVCVSPRNHMVFTPLLASTCVGTLEFRSVAEPIARIQPAISREPGSYFFLS 138 (351)
Q Consensus 62 ~~~VvIIG~G~aGl~aA~~L~~---~g~~v~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 138 (351)
++||||||||++|+++|..|++ .|++|+|||+++.+.|.+.+.....+......+...+.. +....++.++.+
T Consensus 4 m~~vvIIGgG~aGl~aA~~L~~~~~~g~~Vtlie~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~----~~~~~gv~~~~~ 79 (437)
T 3sx6_A 4 SAHVVILGAGTGGMPAAYEMKEALGSGHEVTLISANDYFQFVPSNPWVGVGWKERDDIAFPIRH----YVERKGIHFIAQ 79 (437)
T ss_dssp SCEEEEECCSTTHHHHHHHHHHHHGGGSEEEEECSSSEEECGGGHHHHHHTSSCHHHHEEECHH----HHHTTTCEEECS
T ss_pred CCcEEEECCcHHHHHHHHHHhccCCCcCEEEEEeCCCCCcccCCccccccCccCHHHHHHHHHH----HHHHCCCEEEEe
Confidence 3799999999999999999999 899999999999998888777766665544444333333 334568888889
Q ss_pred EeeeEeCCCCEEEEEeecCccccCCCceeEeeccEEEEecCCCcCCCCCCCccc---cccccCCHHHHHHHHHHHHHhhh
Q 018704 139 HCAGIDTDNHVVHCETVTDELRTLEPWKFKISYDKLVIALGAEASTFGIHGVKE---NATFLREVHHAQEIRRKLLLNLM 215 (351)
Q Consensus 139 ~v~~i~~~~~~v~~~~~~~~~~~~~~~~~~~~~d~lviAtG~~p~~p~i~g~~~---~~~~~~~~~~~~~~~~~~~~~~~ 215 (351)
+|+.++.+.+.+.+ .++. ++.||+||+|||+.|+.|.+||.++ +.+.+.++.++..+.+.+...+
T Consensus 80 ~v~~id~~~~~V~~---~~g~--------~i~~d~lviAtG~~~~~~~ipG~~~~~~~~~~~~~~~~a~~~~~~~~~~~- 147 (437)
T 3sx6_A 80 SAEQIDAEAQNITL---ADGN--------TVHYDYLMIATGPKLAFENVPGSDPHEGPVQSICTVDHAERAFAEYQALL- 147 (437)
T ss_dssp CEEEEETTTTEEEE---TTSC--------EEECSEEEECCCCEECGGGSTTCSTTTSSEECCSSHHHHHHHHHHHHHHH-
T ss_pred EEEEEEcCCCEEEE---CCCC--------EEECCEEEECCCCCcCcccCCCCCcccCcceecccccHHHHHHHHHHHHH-
Confidence 99999999887765 4555 7999999999999999999999863 4566778888888877653211
Q ss_pred ccCCCCCCHhhhcccCeEEEECCChHH------HHHHHHHHHHHHHHHHhhhcCCCCccE-EEEEeCCCCC-----CCCc
Q 018704 216 LSDVPGISEEEKSRLLHCVVVGGGPTG------VEFSGELSDFIMRDVRQRYSHVKDYIH-VTLIEANEIL-----SSFD 283 (351)
Q Consensus 216 ~~~~p~~~~~~~~~~~~v~VvGgG~~a------~e~a~~l~~~~~~~~~~~~~~~~~~~~-v~~~~~~~~l-----~~~~ 283 (351)
..++++|||+|++| +|+|..++....+ . ..+...+ |+++++.+.+ +.++
T Consensus 148 -------------~~~~~vVVGgG~~~g~~G~~~E~a~~la~~l~~----~--g~~~~~~~Vtlv~~~~~~~~~~l~~~~ 208 (437)
T 3sx6_A 148 -------------REPGPIVIGAMAGASCFGPAYEYAMIVASDLKK----R--GMRDKIPSFTFITSEPYIGHLGIQGVG 208 (437)
T ss_dssp -------------HSCCCEEEEECTTCCCCHHHHHHHHHHHHHHHH----T--TCGGGCSCEEEEESSSSTTCTTTTCCT
T ss_pred -------------hCCCEEEEEcCCCCCcCcHHHHHHHHHHHHHHH----c--CCcccCcEEEEEcCCccccccccCcch
Confidence 12367899997654 8988777654311 1 1112244 9999997533 3233
Q ss_pred HHHHHHHHHHhhhcCcEEEcCe-EEEEeCCeEEecC---------CcEEeccEEEEecCCCCccccc-cCCCCCCCCC
Q 018704 284 DRLRHYATTQLSKSGVRLVRGI-VKDVDSQKLILND---------GTEVPYGLLVWSTGVGPSTLVK-SLDLPKSPGG 350 (351)
Q Consensus 284 ~~~~~~~~~~l~~~gV~~~~~~-v~~v~~~~v~~~~---------g~~~~~D~vi~a~G~~p~~~~~-~~gl~~~~~G 350 (351)
+..+.+.+.+++.||+++++. |++++++++.+.+ ++++++|.+++++|+.++.++. ..|+ .+++|
T Consensus 209 -~~~~~~~~~l~~~gI~~~~~~~v~~v~~~~v~~~~~~~~g~~~~~~~i~~D~vv~~~g~~~~~~~~~~~gl-~~~~G 284 (437)
T 3sx6_A 209 -DSKGILTKGLKEEGIEAYTNCKVTKVEDNKMYVTQVDEKGETIKEMVLPVKFGMMIPAFKGVPAVAGVEGL-CNPGG 284 (437)
T ss_dssp -THHHHHHHHHHHTTCEEECSEEEEEEETTEEEEEEECTTSCEEEEEEEECSEEEEECCEECCHHHHTSTTT-BCTTS
T ss_pred -HHHHHHHHHHHHCCCEEEcCCEEEEEECCeEEEEecccCCccccceEEEEeEEEEcCCCcCchhhhccccc-cCCCC
Confidence 477888899999999999995 9999999887764 6779999999999999884443 3465 45555
No 27
>1fec_A Trypanothione reductase; redox-active center, oxidoreductase, flavoprotein, FAD, NADP; HET: FAD; 1.70A {Crithidia fasciculata} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1fea_A* 1feb_A* 2tpr_A* 1tyt_A* 1typ_A* 2jk6_A* 2w0h_A* 2yau_A* 2x50_A* 2ve2_A*
Probab=99.96 E-value=9.6e-29 Score=237.68 Aligned_cols=243 Identities=21% Similarity=0.291 Sum_probs=171.9
Q ss_pred CCcEEEECCchhHHHHHHhhhc-cCceEEEEcC--------CCccccchhhhhhh---------------------cccc
Q 018704 62 KPRVVVLGSGWAGCRLMKGIDT-SLYDVVCVSP--------RNHMVFTPLLASTC---------------------VGTL 111 (351)
Q Consensus 62 ~~~VvIIG~G~aGl~aA~~L~~-~g~~v~vie~--------~~~~~~~~~~~~~~---------------------~~~~ 111 (351)
++||+|||||++|+++|++|++ .|++|+|||+ +..+... +....| .+..
T Consensus 3 ~~dvvVIGgG~aGl~aA~~la~~~G~~V~liE~~~~~~~~~~~~~GG~-c~~~gciPsk~l~~~a~~~~~~~~~~~~g~~ 81 (490)
T 1fec_A 3 AYDLVVIGAGSGGLEAGWNAASLHKKRVAVIDLQKHHGPPHYAALGGT-CVNVGCVPKKLMVTGANYMDTIRESAGFGWE 81 (490)
T ss_dssp SEEEEEECCSHHHHHHHHHHHHHHCCCEEEEESCSSSBTTTBSCTTCH-HHHHSHHHHHHHHHHHHHHHHHHHGGGGTEE
T ss_pred cccEEEECCCHHHHHHHHHHHHHcCCEEEEEecccccccccCCCcCcc-ccCCCcchhhHHHHHHHHHHHHHHHHhcCcc
Confidence 4799999999999999999999 9999999992 3322111 000000 0000
Q ss_pred c-----ccccccchh----------ccchhhhcCC-CeEEEEEEeeeEeCCCCEEEEEee--cCccccCCCceeEeeccE
Q 018704 112 E-----FRSVAEPIA----------RIQPAISREP-GSYFFLSHCAGIDTDNHVVHCETV--TDELRTLEPWKFKISYDK 173 (351)
Q Consensus 112 ~-----~~~~~~~~~----------~~~~~~~~~~-~~~~~~~~v~~i~~~~~~v~~~~~--~~~~~~~~~~~~~~~~d~ 173 (351)
. ..++..... .......... ++.++.+.+..++. +.+.+... .++. ....+.||+
T Consensus 82 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~gv~~~~g~~~~i~~--~~v~v~~~~~~~g~-----~~~~~~~d~ 154 (490)
T 1fec_A 82 LDRESVRPNWKALIAAKNKAVSGINDSYEGMFADTEGLTFHQGFGALQDN--HTVLVRESADPNSA-----VLETLDTEY 154 (490)
T ss_dssp CCGGGCEECHHHHHHHHHHHHHHHHHHHHHHHHTSTTEEEEESEEEEEET--TEEEEESSSSTTSC-----EEEEEEEEE
T ss_pred cCCcccccCHHHHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEeEEEEeeC--CEEEEEeeccCCCC-----ceEEEEcCE
Confidence 0 000100000 0111122344 89998888888774 56665321 1330 002899999
Q ss_pred EEEecCCCcCCCCCCCccccccccCCHHHHHHHHHHHHHhhhccCCCCCCHhhhcccCeEEEECCChHHHHHHHHHHHH-
Q 018704 174 LVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEKSRLLHCVVVGGGPTGVEFSGELSDF- 252 (351)
Q Consensus 174 lviAtG~~p~~p~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~v~VvGgG~~a~e~a~~l~~~- 252 (351)
||||||+.|..|++||. +.++ +..++ +.+...| ++++|||||.+|+|+|..|.++
T Consensus 155 lviAtGs~p~~p~i~g~-~~~~---~~~~~----------~~~~~~~----------~~vvViGgG~ig~E~A~~l~~~~ 210 (490)
T 1fec_A 155 ILLATGSWPQHLGIEGD-DLCI---TSNEA----------FYLDEAP----------KRALCVGGGYISIEFAGIFNAYK 210 (490)
T ss_dssp EEECCCEEECCCCSBTG-GGCB---CHHHH----------TTCSSCC----------SEEEEECSSHHHHHHHHHHHHHS
T ss_pred EEEeCCCCCCCCCCCCc-ccee---cHHHH----------hhhhhcC----------CeEEEECCCHHHHHHHHHHHhhc
Confidence 99999999999999987 3332 22221 1122223 5999999999999999999887
Q ss_pred --HHHHHHhhhcCCCCccEEEEEeCC-CCCCCCcHHHHHHHHHHhhhcCcEEEcCe-EEEEeCC-----eEEecCCcEEe
Q 018704 253 --IMRDVRQRYSHVKDYIHVTLIEAN-EILSSFDDRLRHYATTQLSKSGVRLVRGI-VKDVDSQ-----KLILNDGTEVP 323 (351)
Q Consensus 253 --~~~~~~~~~~~~~~~~~v~~~~~~-~~l~~~~~~~~~~~~~~l~~~gV~~~~~~-v~~v~~~-----~v~~~~g~~~~ 323 (351)
+ .+|+++++. .+++.+++++.+.+.+.+++.||+++++. |++++.+ .+.+.+|++++
T Consensus 211 ~~g--------------~~Vtlv~~~~~~l~~~d~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~~~~v~~~~G~~i~ 276 (490)
T 1fec_A 211 ARG--------------GQVDLAYRGDMILRGFDSELRKQLTEQLRANGINVRTHENPAKVTKNADGTRHVVFESGAEAD 276 (490)
T ss_dssp CTT--------------CEEEEEESSSSSSTTSCHHHHHHHHHHHHHTTEEEEETCCEEEEEECTTSCEEEEETTSCEEE
T ss_pred cCc--------------CeEEEEEcCCCcccccCHHHHHHHHHHHHhCCCEEEeCCEEEEEEEcCCCEEEEEECCCcEEE
Confidence 6 899999997 57888999999999999999999999995 9988642 56778888999
Q ss_pred ccEEEEecCCCCc-c-c-cccCCCCCCCCC
Q 018704 324 YGLLVWSTGVGPS-T-L-VKSLDLPKSPGG 350 (351)
Q Consensus 324 ~D~vi~a~G~~p~-~-~-~~~~gl~~~~~G 350 (351)
+|.||+|+|++|+ + + ++.+|++++++|
T Consensus 277 ~D~vv~a~G~~p~~~~L~l~~~gl~~~~~G 306 (490)
T 1fec_A 277 YDVVMLAIGRVPRSQTLQLEKAGVEVAKNG 306 (490)
T ss_dssp ESEEEECSCEEESCTTSCGGGGTCCBCTTS
T ss_pred cCEEEEccCCCcCccccCchhcCccCCCCC
Confidence 9999999999999 5 4 678888887665
No 28
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=99.96 E-value=1.3e-29 Score=231.89 Aligned_cols=247 Identities=15% Similarity=0.201 Sum_probs=165.7
Q ss_pred CCCCCcEEEECCchhHHHHHHhhhccCceEEEEcCCCccccch--hhhhh--hcccccccc--cccchhccchhhhcCCC
Q 018704 59 ANEKPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRNHMVFTP--LLAST--CVGTLEFRS--VAEPIARIQPAISREPG 132 (351)
Q Consensus 59 ~~~~~~VvIIG~G~aGl~aA~~L~~~g~~v~vie~~~~~~~~~--~~~~~--~~~~~~~~~--~~~~~~~~~~~~~~~~~ 132 (351)
..+++||+|||||++||++|+.|++.|++|+|||+.+...+.+ .+... ....+.+.. ....+...........+
T Consensus 19 ~~~~~~vvIIG~G~aGl~aA~~l~~~g~~v~vie~~~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 98 (338)
T 3itj_A 19 SHVHNKVTIIGSGPAAHTAAIYLARAEIKPILYEGMMANGIAAGGQLTTTTEIENFPGFPDGLTGSELMDRMREQSTKFG 98 (338)
T ss_dssp --CEEEEEEECCSHHHHHHHHHHHHTTCCCEEECCSSBTTBCTTCGGGGSSEECCSTTCTTCEEHHHHHHHHHHHHHHTT
T ss_pred CCCCCCEEEECcCHHHHHHHHHHHHCCCCEEEEecCCCCCCCcCcccccchhhcccCCCcccCCHHHHHHHHHHHHHHcC
Confidence 3456899999999999999999999999999999965211110 00000 000011110 01122222223333447
Q ss_pred eEEEEEEeeeEeCCCCEEEEEee--cCccccCCCceeEeeccEEEEecCCCcCCCCCCCccccccccCCHHHHHHHHHHH
Q 018704 133 SYFFLSHCAGIDTDNHVVHCETV--TDELRTLEPWKFKISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKL 210 (351)
Q Consensus 133 ~~~~~~~v~~i~~~~~~v~~~~~--~~~~~~~~~~~~~~~~d~lviAtG~~p~~p~i~g~~~~~~~~~~~~~~~~~~~~~ 210 (351)
+.++...|+.++.+.+.+.+... .++. .+.||+||+|||..|+.|.+||.+.. ....+.....+.+.+
T Consensus 99 v~i~~~~v~~i~~~~~~~~v~~~~~~~~~--------~~~~d~vvlAtG~~~~~~~~~g~~~~--~~~~~~~~~~~~~~~ 168 (338)
T 3itj_A 99 TEIITETVSKVDLSSKPFKLWTEFNEDAE--------PVTTDAIILATGASAKRMHLPGEETY--WQKGISACAVCDGAV 168 (338)
T ss_dssp CEEECSCEEEEECSSSSEEEEETTCSSSC--------CEEEEEEEECCCEEECCCCCTTHHHH--BTTTEESCHHHHTTS
T ss_pred CEEEEeEEEEEEEcCCEEEEEEEecCCCc--------EEEeCEEEECcCCCcCCCCCCCchhc--cCccEEEchhcccch
Confidence 77877779999999888877553 2333 79999999999999999999997421 111111111111110
Q ss_pred HHhhhccCCCCCCHhhhcccCeEEEECCChHHHHHHHHHHHHHHHHHHhhhcCCCCccEEEEEeCCCCCCCCcHHHHHHH
Q 018704 211 LLNLMLSDVPGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEILSSFDDRLRHYA 290 (351)
Q Consensus 211 ~~~~~~~~~p~~~~~~~~~~~~v~VvGgG~~a~e~a~~l~~~~~~~~~~~~~~~~~~~~v~~~~~~~~l~~~~~~~~~~~ 290 (351)
.....++++|||+|.+|+|+|..|.+.+ .+|+++++...+.. .+.+
T Consensus 169 ---------------~~~~~~~v~vvG~G~~g~e~a~~l~~~g--------------~~v~~v~~~~~~~~-----~~~~ 214 (338)
T 3itj_A 169 ---------------PIFRNKPLAVIGGGDSACEEAQFLTKYG--------------SKVFMLVRKDHLRA-----STIM 214 (338)
T ss_dssp ---------------GGGTTSEEEEECSSHHHHHHHHHHTTTS--------------SEEEEECSSSSCCS-----CHHH
T ss_pred ---------------hhcCCCEEEEECCCHHHHHHHHHHHhcC--------------CEEEEEEcCCccCC-----CHHH
Confidence 0134469999999999999999998876 89999999754322 2334
Q ss_pred HHHhhhc-CcEEEcCe-EEEEeCC-----eEEecC-----CcEEeccEEEEecCCCCc-cccccCCCCCCCCC
Q 018704 291 TTQLSKS-GVRLVRGI-VKDVDSQ-----KLILND-----GTEVPYGLLVWSTGVGPS-TLVKSLDLPKSPGG 350 (351)
Q Consensus 291 ~~~l~~~-gV~~~~~~-v~~v~~~-----~v~~~~-----g~~~~~D~vi~a~G~~p~-~~~~~~gl~~~~~G 350 (351)
.+.+.+. ||+++.+. |++++.+ +|++.+ +.++++|.||+|+|++|+ .+++. +++++++|
T Consensus 215 ~~~l~~~~gv~i~~~~~v~~i~~~~~~~~~v~~~~~~~g~~~~i~~D~vi~a~G~~p~~~~~~~-~l~~~~~G 286 (338)
T 3itj_A 215 QKRAEKNEKIEILYNTVALEAKGDGKLLNALRIKNTKKNEETDLPVSGLFYAIGHTPATKIVAG-QVDTDEAG 286 (338)
T ss_dssp HHHHHHCTTEEEECSEEEEEEEESSSSEEEEEEEETTTTEEEEEECSEEEECSCEEECCGGGBT-TBCBCTTS
T ss_pred HHHHHhcCCeEEeecceeEEEEcccCcEEEEEEEECCCCceEEEEeCEEEEEeCCCCChhHhhC-ceEecCCC
Confidence 4555554 99999995 9998764 277765 467999999999999999 67766 88877666
No 29
>2hqm_A GR, grase, glutathione reductase; glutathione reductase complexed with FAD, oxidoreductase; HET: NAG FAD GSH; 2.40A {Saccharomyces cerevisiae}
Probab=99.96 E-value=1.5e-28 Score=235.80 Aligned_cols=241 Identities=17% Similarity=0.203 Sum_probs=171.5
Q ss_pred CCcEEEECCchhHHHHHHhhhccCceEEEEcCCCccccchh----hh-----------hhhc-----cccc---------
Q 018704 62 KPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRNHMVFTPL----LA-----------STCV-----GTLE--------- 112 (351)
Q Consensus 62 ~~~VvIIG~G~aGl~aA~~L~~~g~~v~vie~~~~~~~~~~----~~-----------~~~~-----~~~~--------- 112 (351)
++||+|||||++|+++|+.|++.|.+|+|||++... .... .+ .... +...
T Consensus 11 ~~dVvVIGgG~aGl~aA~~l~~~g~~V~liE~~~~G-G~~~n~gciP~k~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 89 (479)
T 2hqm_A 11 HYDYLVIGGGSGGVASARRAASYGAKTLLVEAKALG-GTCVNVGCVPKKVMWYASDLATRVSHANEYGLYQNLPLDKEHL 89 (479)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTSCCEEEEESSCTT-HHHHHHSHHHHHHHHHHHHHHHHHTTTTTTTBSTTSCCSGGGC
T ss_pred cCCEEEEcCCHHHHHHHHHHHHCCCcEEEEeCCCcC-CcCcccCcHHHHHHHHHHHHHHHHHhHHhcCcccccccccccC
Confidence 479999999999999999999999999999997421 1000 00 0000 0000
Q ss_pred ccccccc----------hhccchhhhcCCCeEEEEEEeeeEeCCCCEEEEEeecCccccCCCceeEeeccEEEEecCCCc
Q 018704 113 FRSVAEP----------IARIQPAISREPGSYFFLSHCAGIDTDNHVVHCETVTDELRTLEPWKFKISYDKLVIALGAEA 182 (351)
Q Consensus 113 ~~~~~~~----------~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~v~~~~~~~~~~~~~~~~~~~~~d~lviAtG~~p 182 (351)
..++... +...........++.++...+..++.. .+.+.. .+++ ...+.||+||+|||+.|
T Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~g~~~~i~~~--~~~v~~-~~g~------~~~~~~d~lviAtGs~p 160 (479)
T 2hqm_A 90 TFNWPEFKQKRDAYVHRLNGIYQKNLEKEKVDVVFGWARFNKDG--NVEVQK-RDNT------TEVYSANHILVATGGKA 160 (479)
T ss_dssp CBCHHHHHHHHHHHHHHHHHHHHHHHHHTTEEEEEEEEEECTTS--CEEEEE-SSSC------CEEEEEEEEEECCCEEE
T ss_pred ccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeEEEEeeCC--EEEEEe-CCCc------EEEEEeCEEEEcCCCCC
Confidence 0000000 000111122345788888887776543 454433 2332 13689999999999999
Q ss_pred CCC-CCCCccccccccCCHHHHHHHHHHHHHhhhccCCCCCCHhhhcccCeEEEECCChHHHHHHHHHHHHHHHHHHhhh
Q 018704 183 STF-GIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRY 261 (351)
Q Consensus 183 ~~p-~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~v~VvGgG~~a~e~a~~l~~~~~~~~~~~~ 261 (351)
..| ++||.+ .+++ ..+... +.. ..++++|||||.+|+|+|..|.+++
T Consensus 161 ~~p~~i~g~~-~~~~---~~~~~~----------l~~----------~~~~vvViGgG~ig~E~A~~l~~~g-------- 208 (479)
T 2hqm_A 161 IFPENIPGFE-LGTD---SDGFFR----------LEE----------QPKKVVVVGAGYIGIELAGVFHGLG-------- 208 (479)
T ss_dssp CCCTTSTTGG-GSBC---HHHHHH----------CSS----------CCSEEEEECSSHHHHHHHHHHHHTT--------
T ss_pred CCCCCCCCcc-cccc---hHHHhc----------ccc----------cCCeEEEECCCHHHHHHHHHHHHcC--------
Confidence 999 899873 3322 222211 122 2359999999999999999999887
Q ss_pred cCCCCccEEEEEeCC-CCCCCCcHHHHHHHHHHhhhcCcEEEcCe-EEEEeCC------eEEecCC-cEEeccEEEEecC
Q 018704 262 SHVKDYIHVTLIEAN-EILSSFDDRLRHYATTQLSKSGVRLVRGI-VKDVDSQ------KLILNDG-TEVPYGLLVWSTG 332 (351)
Q Consensus 262 ~~~~~~~~v~~~~~~-~~l~~~~~~~~~~~~~~l~~~gV~~~~~~-v~~v~~~------~v~~~~g-~~~~~D~vi~a~G 332 (351)
.+|+++++. .+++.+++++.+.+.+.+++.||+++++. |++++.+ .+.+.+| +++++|.||+|+|
T Consensus 209 ------~~Vtlv~~~~~~l~~~d~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~~~~~v~~~~G~~~i~~D~vv~a~G 282 (479)
T 2hqm_A 209 ------SETHLVIRGETVLRKFDECIQNTITDHYVKEGINVHKLSKIVKVEKNVETDKLKIHMNDSKSIDDVDELIWTIG 282 (479)
T ss_dssp ------CEEEEECSSSSSCTTSCHHHHHHHHHHHHHHTCEEECSCCEEEEEECC-CCCEEEEETTSCEEEEESEEEECSC
T ss_pred ------CceEEEEeCCccccccCHHHHHHHHHHHHhCCeEEEeCCEEEEEEEcCCCcEEEEEECCCcEEEEcCEEEECCC
Confidence 899999997 57888999999999999999999999995 9988642 4777888 7899999999999
Q ss_pred CCCc-cc-cccCCCCCCCCC
Q 018704 333 VGPS-TL-VKSLDLPKSPGG 350 (351)
Q Consensus 333 ~~p~-~~-~~~~gl~~~~~G 350 (351)
++|+ .+ ++.+|++++++|
T Consensus 283 ~~p~~~l~l~~~gl~~~~~G 302 (479)
T 2hqm_A 283 RKSHLGMGSENVGIKLNSHD 302 (479)
T ss_dssp EEECCCSSGGGGTCCBCTTS
T ss_pred CCCccccChhhcCceECCCC
Confidence 9999 56 688888887766
No 30
>3qfa_A Thioredoxin reductase 1, cytoplasmic; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_A* 2j3n_A* 2zzc_A* 2zzb_A* 2zz0_A* 2cfy_A* 1h6v_A* 3ean_A* 3eao_A*
Probab=99.96 E-value=5.2e-29 Score=241.11 Aligned_cols=245 Identities=18% Similarity=0.235 Sum_probs=168.8
Q ss_pred CCCCcEEEECCchhHHHHHHhhhccCceEEEEcCCCccccch--hhhhhhc--------------------------ccc
Q 018704 60 NEKPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRNHMVFTP--LLASTCV--------------------------GTL 111 (351)
Q Consensus 60 ~~~~~VvIIG~G~aGl~aA~~L~~~g~~v~vie~~~~~~~~~--~~~~~~~--------------------------~~~ 111 (351)
...+||+||||||||++||..|++.|++|+|||+++...+.. .+.+.|. +..
T Consensus 30 ~~~~DVvVIGgGpaGl~aA~~la~~G~~V~liEk~~~~~~~~~~~~GGtc~~~GciPsk~l~~~~~~~~~~~~~~~~g~~ 109 (519)
T 3qfa_A 30 SYDYDLIIIGGGSGGLAAAKEAAQYGKKVMVLDFVTPTPLGTRWGLGGTCVNVGCIPKKLMHQAALLGQALQDSRNYGWK 109 (519)
T ss_dssp SCSEEEEEECCSHHHHHHHHHHHHTTCCEEEECCCCCCTTCCCCCTTCHHHHHSHHHHHHHHHHHHHHHHHHHHHHTTBC
T ss_pred CCCCCEEEECCCHHHHHHHHHHHhCCCeEEEEeccCccccccCCCcccccCCcCccchHHHHHHHHHHHHHHHHHhcCcc
Confidence 345899999999999999999999999999999854111000 0011000 100
Q ss_pred c----ccccc---cchhc-------cchhhhcCCCeEEEEEEeeeEeCCCCEEEEEeecCccccCCCceeEeeccEEEEe
Q 018704 112 E----FRSVA---EPIAR-------IQPAISREPGSYFFLSHCAGIDTDNHVVHCETVTDELRTLEPWKFKISYDKLVIA 177 (351)
Q Consensus 112 ~----~~~~~---~~~~~-------~~~~~~~~~~~~~~~~~v~~i~~~~~~v~~~~~~~~~~~~~~~~~~~~~d~lviA 177 (351)
. ..++. ..... .........++.++...+..++.. .+.+.. .+++ ..++.||+||||
T Consensus 110 ~~~~~~~d~~~~~~~~~~~~~~l~~~~~~~~~~~gV~~i~g~a~~~d~~--~v~v~~-~~g~------~~~i~~d~lViA 180 (519)
T 3qfa_A 110 VEETVKHDWDRMIEAVQNHIGSLNWGYRVALREKKVVYENAYGQFIGPH--RIKATN-NKGK------EKIYSAERFLIA 180 (519)
T ss_dssp CCSSCCBCHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEECSEEEEEETT--EEEEEC-TTCC------CCEEEEEEEEEC
T ss_pred cCCcCccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEEEEEEeeCC--EEEEEc-CCCC------EEEEECCEEEEE
Confidence 0 00111 00010 111123345788888888877755 444432 2332 137999999999
Q ss_pred cCCCcCCCCCCCccccccccCCHHHHHHHHHHHHHhhhccCCCCCCHhhhcccCeEEEECCChHHHHHHHHHHHHHHHHH
Q 018704 178 LGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDV 257 (351)
Q Consensus 178 tG~~p~~p~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~v~VvGgG~~a~e~a~~l~~~~~~~~ 257 (351)
||+.|+.|++||.++.+++ ..++ +.+...| ++++|||||.+|+|+|..|.+++
T Consensus 181 TGs~p~~p~i~G~~~~~~t---~~~~----------~~l~~~~----------~~vvVIGgG~ig~E~A~~l~~~G---- 233 (519)
T 3qfa_A 181 TGERPRYLGIPGDKEYCIS---SDDL----------FSLPYCP----------GKTLVVGASYVALECAGFLAGIG---- 233 (519)
T ss_dssp CCEEECCCCCTTHHHHCBC---HHHH----------TTCSSCC----------CSEEEECCSHHHHHHHHHHHHTT----
T ss_pred CCCCcCCCCCCCccCceEc---HHHH----------hhhhhcC----------CeEEEECCcHHHHHHHHHHHHcC----
Confidence 9999999999997543332 1111 2233334 48999999999999999999887
Q ss_pred HhhhcCCCCccEEEEEeCCCCCCCCcHHHHHHHHHHhhhcCcEEEcCe-EEEEeC------CeEEe----cCCc---EEe
Q 018704 258 RQRYSHVKDYIHVTLIEANEILSSFDDRLRHYATTQLSKSGVRLVRGI-VKDVDS------QKLIL----NDGT---EVP 323 (351)
Q Consensus 258 ~~~~~~~~~~~~v~~~~~~~~l~~~~~~~~~~~~~~l~~~gV~~~~~~-v~~v~~------~~v~~----~~g~---~~~ 323 (351)
.+|++++++.+++.+++++.+.+.+.+++.||+++.+. ++++.. +.+.+ .+|. +++
T Consensus 234 ----------~~Vtlv~~~~~l~~~d~~~~~~~~~~l~~~GV~v~~~~~v~~v~~~~~~~~~~~~v~~~~~~g~~~~~~~ 303 (519)
T 3qfa_A 234 ----------LDVTVMVRSILLRGFDQDMANKIGEHMEEHGIKFIRQFVPIKVEQIEAGTPGRLRVVAQSTNSEEIIEGE 303 (519)
T ss_dssp ----------CCEEEEESSCSSTTSCHHHHHHHHHHHHHTTCEEEESEEEEEEEEEECCTTCEEEEEEEESSSSCEEEEE
T ss_pred ----------CeEEEEecccccccCCHHHHHHHHHHHHHCCCEEEeCCeEEEEEEccCCCCceEEEEEEECCCcEEEEEE
Confidence 89999999888899999999999999999999999994 555532 23322 3552 578
Q ss_pred ccEEEEecCCCCc-cc--cccCCCCCC-CCC
Q 018704 324 YGLLVWSTGVGPS-TL--VKSLDLPKS-PGG 350 (351)
Q Consensus 324 ~D~vi~a~G~~p~-~~--~~~~gl~~~-~~G 350 (351)
+|.||+|+|++|+ ++ ++.+|++++ ++|
T Consensus 304 ~D~vi~a~G~~p~~~~l~l~~~gl~~~~~~G 334 (519)
T 3qfa_A 304 YNTVMLAIGRDACTRKIGLETVGVKINEKTG 334 (519)
T ss_dssp ESEEEECSCEEESCSSSCSTTTTCCCCTTTC
T ss_pred CCEEEEecCCcccCCCCChhhcCcEEcCCCC
Confidence 9999999999999 55 677888887 455
No 31
>3l8k_A Dihydrolipoyl dehydrogenase; redox-active center, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.50A {Sulfolobus solfataricus}
Probab=99.96 E-value=3.7e-29 Score=239.29 Aligned_cols=243 Identities=20% Similarity=0.274 Sum_probs=171.9
Q ss_pred CCcEEEECCchhHHHHHHhhhccCceEEEEcCCCccccchhhhhhhc---------------------ccccccccccc-
Q 018704 62 KPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRNHMVFTPLLASTCV---------------------GTLEFRSVAEP- 119 (351)
Q Consensus 62 ~~~VvIIG~G~aGl~aA~~L~~~g~~v~vie~~~~~~~~~~~~~~~~---------------------~~~~~~~~~~~- 119 (351)
++||+|||||++|+++|..|++.|++|+|||+++.+.......+... ....+..+...
T Consensus 4 ~~DVvVIGgG~aGl~aA~~l~~~G~~V~liEk~~~~GG~~~~~gciPsk~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (466)
T 3l8k_A 4 KYDVVVIGAGGAGYHGAFRLAKAKYNVLMADPKGELGGNCLYSGCVPSKTVREVIQTAWRLTNIANVKIPLDFSTVQDRK 83 (466)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECTTSSSSHHHHHHSHHHHHHHHHHHHHHHHHHHHHCSCCCCCHHHHHHHH
T ss_pred cceEEEECCCHHHHHHHHHHHhCCCeEEEEECCCCCCCcccccCCCchHHHHHHHHHHHHHHhcccCCCCcCHHHHHHHH
Confidence 47999999999999999999999999999998776532211100000 00011101000
Q ss_pred -----hh--ccchhhhcCCCeEEEEEEeeeEeCCCCEEEEEeecCccccCCCceeEeeccEEEEecCCCcCCCCCCCccc
Q 018704 120 -----IA--RIQPAISREPGSYFFLSHCAGIDTDNHVVHCETVTDELRTLEPWKFKISYDKLVIALGAEASTFGIHGVKE 192 (351)
Q Consensus 120 -----~~--~~~~~~~~~~~~~~~~~~v~~i~~~~~~v~~~~~~~~~~~~~~~~~~~~~d~lviAtG~~p~~p~i~g~~~ 192 (351)
+. .....+....++.++...+..++.. .+.+.. .+++ ..++.||+||+|||+.|+.|++||.+
T Consensus 84 ~~~~~l~~~~~~~~~~~~~~v~~~~g~v~~id~~--~~~V~~-~~g~------~~~~~~d~lviAtG~~p~~p~i~G~~- 153 (466)
T 3l8k_A 84 DYVQELRFKQHKRNMSQYETLTFYKGYVKIKDPT--HVIVKT-DEGK------EIEAETRYMIIASGAETAKLRLPGVE- 153 (466)
T ss_dssp HHHHHHHHHHHHHHHTTCTTEEEESEEEEEEETT--EEEEEE-TTSC------EEEEEEEEEEECCCEEECCCCCTTGG-
T ss_pred HhheeccccchHHHHHHhCCCEEEEeEEEEecCC--eEEEEc-CCCc------EEEEecCEEEECCCCCccCCCCCCcc-
Confidence 11 2223344566889988899988865 444432 3454 11299999999999999999999985
Q ss_pred cccccCCHHHHHHHHHHHHHhhhccCCCCCCHhhhcccCeEEEECCChHHHHHHHHHHHHHHHHHHhhhcCCCCccEEEE
Q 018704 193 NATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTL 272 (351)
Q Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~v~VvGgG~~a~e~a~~l~~~~~~~~~~~~~~~~~~~~v~~ 272 (351)
.+ .+..++..++. .+. ...++++|||||.+|+|+|..|.+++ .+|++
T Consensus 154 ~~---~t~~~~~~~~~------~l~----------~~~~~vvViGgG~~g~e~A~~l~~~g--------------~~Vtl 200 (466)
T 3l8k_A 154 YC---LTSDDIFGYKT------SFR----------KLPQDMVIIGAGYIGLEIASIFRLMG--------------VQTHI 200 (466)
T ss_dssp GS---BCHHHHHSTTC------SCC----------SCCSEEEEECCSHHHHHHHHHHHHTT--------------CEEEE
T ss_pred ce---EeHHHHHHHHH------HHh----------hCCCeEEEECCCHHHHHHHHHHHHcC--------------CEEEE
Confidence 32 23333321111 111 12359999999999999999999887 89999
Q ss_pred EeCC-CCCCCC-cHHHHHHHHHHhhhcCcEEEcCe-EEEEeC---Ce--EEec--CCc--EEeccEEEEecCCCCc-cc-
Q 018704 273 IEAN-EILSSF-DDRLRHYATTQLSKSGVRLVRGI-VKDVDS---QK--LILN--DGT--EVPYGLLVWSTGVGPS-TL- 338 (351)
Q Consensus 273 ~~~~-~~l~~~-~~~~~~~~~~~l~~~gV~~~~~~-v~~v~~---~~--v~~~--~g~--~~~~D~vi~a~G~~p~-~~- 338 (351)
+++. .+++.+ ++++.+.+.+.++ |+++.+. |++++. ++ +.+. +|+ ++++|.||+|+|++|+ ++
T Consensus 201 v~~~~~~l~~~~d~~~~~~l~~~l~---v~i~~~~~v~~i~~~~~~~v~v~~~~~~G~~~~i~~D~vi~a~G~~p~~~l~ 277 (466)
T 3l8k_A 201 IEMLDRALITLEDQDIVNTLLSILK---LNIKFNSPVTEVKKIKDDEYEVIYSTKDGSKKSIFTNSVVLAAGRRPVIPEG 277 (466)
T ss_dssp ECSSSSSCTTSCCHHHHHHHHHHHC---CCEECSCCEEEEEEEETTEEEEEECCTTSCCEEEEESCEEECCCEEECCCTT
T ss_pred EEeCCcCCCCCCCHHHHHHHHhcCE---EEEEECCEEEEEEEcCCCcEEEEEEecCCceEEEEcCEEEECcCCCcccccc
Confidence 9997 577777 9999998888876 9999994 888876 33 5666 676 7999999999999999 53
Q ss_pred cccCCCCCCCCC
Q 018704 339 VKSLDLPKSPGG 350 (351)
Q Consensus 339 ~~~~gl~~~~~G 350 (351)
++.+|++++++|
T Consensus 278 l~~~gl~~~~~G 289 (466)
T 3l8k_A 278 AREIGLSISKTG 289 (466)
T ss_dssp TGGGTCCBCSSS
T ss_pred hhhcCceeCCCC
Confidence 678888887665
No 32
>1mo9_A ORF3; nucleotide binding motifs, nucleotide binding domain, oxidor; HET: FAD KPC; 1.65A {Xanthobacter autotrophicus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1mok_A* 2c3c_A* 2c3d_A* 3q6j_A*
Probab=99.96 E-value=2.7e-29 Score=243.43 Aligned_cols=242 Identities=18% Similarity=0.207 Sum_probs=173.5
Q ss_pred CCCCcEEEECCchhHHHHHHhhhccCceEEEEcCCCccccchh----hhhhh----------------cc-ccccc----
Q 018704 60 NEKPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRNHMVFTPL----LASTC----------------VG-TLEFR---- 114 (351)
Q Consensus 60 ~~~~~VvIIG~G~aGl~aA~~L~~~g~~v~vie~~~~~~~~~~----~~~~~----------------~~-~~~~~---- 114 (351)
..++||+|||||++|+++|++|++.|++|+|||+++.+..... .+... .+ .....
T Consensus 41 ~~~~dVvIIGgG~aGl~aA~~l~~~G~~V~liE~~~~~GG~~~~~g~~p~k~l~~~~~~~~~~~~~~~~g~~~~~~~~~~ 120 (523)
T 1mo9_A 41 PREYDAIFIGGGAAGRFGSAYLRAMGGRQLIVDRWPFLGGSCPHNACVPHHLFSDCAAELMLARTFSGQYWFPDMTEKVV 120 (523)
T ss_dssp CSCBSEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSSSCHHHHHSHHHHHHHHHHHHHHHHHHHTTTSTTCCCCTTCCC
T ss_pred CCcCCEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCCCCCcccccCcCchHHHHHHHHHHHHHhhhhhcCcHHHHHhhhh
Confidence 3458999999999999999999999999999999874321100 00000 00 00000
Q ss_pred ---ccccchhccch---hhh-----cCCCeEEE-EEEeeeEeCCCCEEEEEeecCccccCCCceeEeeccEEEEecCCCc
Q 018704 115 ---SVAEPIARIQP---AIS-----REPGSYFF-LSHCAGIDTDNHVVHCETVTDELRTLEPWKFKISYDKLVIALGAEA 182 (351)
Q Consensus 115 ---~~~~~~~~~~~---~~~-----~~~~~~~~-~~~v~~i~~~~~~v~~~~~~~~~~~~~~~~~~~~~d~lviAtG~~p 182 (351)
.+...+..... .+. ...++.++ ...+..++. +.+.+ . +. .+.||+||+|||+.|
T Consensus 121 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~gv~~~~~~~v~~i~~--~~v~~---~-g~--------~~~~d~lViATGs~p 186 (523)
T 1mo9_A 121 GIKEVVDLFRAGRNGPHGIMNFQSKEQLNLEYILNCPAKVIDN--HTVEA---A-GK--------VFKAKNLILAVGAGP 186 (523)
T ss_dssp CHHHHHHHHHHHTHHHHHHHHHHHHHTSCCCEEESSCCEEEET--TEEEE---T-TE--------EEEBSCEEECCCEEC
T ss_pred hHHHHHHHHHhhhhhhhhhhhhcccccCCcEEEEeeEEEEeeC--CEEEE---C-CE--------EEEeCEEEECCCCCC
Confidence 00011111011 122 44567776 777877775 45554 2 44 799999999999999
Q ss_pred CCCCCCCcccc-ccccCCHHHHHHHHHHHHHhhhccCCCCCCHhhhcccCeEEEECCChHHHHHHHHHHHHHHHHHHhhh
Q 018704 183 STFGIHGVKEN-ATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRY 261 (351)
Q Consensus 183 ~~p~i~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~v~VvGgG~~a~e~a~~l~~~~~~~~~~~~ 261 (351)
..|++||.+.. +++ ..++. +. +...| .++++|||||.+|+|+|..+.+++
T Consensus 187 ~~p~i~G~~~~~v~~---~~~~~---~~------l~~~~---------g~~vvViGgG~~g~E~A~~l~~~G-------- 237 (523)
T 1mo9_A 187 GTLDVPGVNAKGVFD---HATLV---EE------LDYEP---------GSTVVVVGGSKTAVEYGCFFNATG-------- 237 (523)
T ss_dssp CCCCSTTTTSBTEEE---HHHHH---HH------CCSCC---------CSEEEEECCSHHHHHHHHHHHHTT--------
T ss_pred CCCCCCCcccCcEee---HHHHH---HH------HHhcC---------CCeEEEECCCHHHHHHHHHHHHcC--------
Confidence 99999997532 332 22221 11 12223 159999999999999999999887
Q ss_pred cCCCCccEEEEEeCC-CCCCCCcHHHHHHHHHHhhhcCcEEEcCe-EEEEeC--Ce------EEecCCc-EEeccEEEEe
Q 018704 262 SHVKDYIHVTLIEAN-EILSSFDDRLRHYATTQLSKSGVRLVRGI-VKDVDS--QK------LILNDGT-EVPYGLLVWS 330 (351)
Q Consensus 262 ~~~~~~~~v~~~~~~-~~l~~~~~~~~~~~~~~l~~~gV~~~~~~-v~~v~~--~~------v~~~~g~-~~~~D~vi~a 330 (351)
.+|+++++. .+++.+++++.+.+.+.+++.||+++++. |++++. ++ |.+.+|+ ++++|.||+|
T Consensus 238 ------~~Vtlv~~~~~~l~~~~~~~~~~l~~~l~~~GV~i~~~~~V~~i~~~~~~~v~~~~v~~~~G~~~i~aD~Vv~A 311 (523)
T 1mo9_A 238 ------RRTVMLVRTEPLKLIKDNETRAYVLDRMKEQGMEIISGSNVTRIEEDANGRVQAVVAMTPNGEMRIETDFVFLG 311 (523)
T ss_dssp ------CEEEEECSSCTTTTCCSHHHHHHHHHHHHHTTCEEESSCEEEEEEECTTSBEEEEEEEETTEEEEEECSCEEEC
T ss_pred ------CeEEEEEecCcccccccHHHHHHHHHHHHhCCcEEEECCEEEEEEEcCCCceEEEEEEECCCcEEEEcCEEEEC
Confidence 899999997 57788899999999999999999999994 998864 33 5667887 8999999999
Q ss_pred cCCCCc-c-ccccCCCCCCCCC
Q 018704 331 TGVGPS-T-LVKSLDLPKSPGG 350 (351)
Q Consensus 331 ~G~~p~-~-~~~~~gl~~~~~G 350 (351)
+|++|+ + +++.+|++++++|
T Consensus 312 ~G~~p~~~~~l~~~gl~~~~~G 333 (523)
T 1mo9_A 312 LGEQPRSAELAKILGLDLGPKG 333 (523)
T ss_dssp CCCEECCHHHHHHHTCCBCTTS
T ss_pred cCCccCCccCHHHcCCccCCCC
Confidence 999999 5 7888888887666
No 33
>4b1b_A TRXR, thioredoxin reductase; oxidoreductase, FAD, NADPH, thiol-mediated redox metabolism, pyridine nucleotide-disulfide oxidoreductase; HET: FAD; 2.90A {Plasmodium falciparum}
Probab=99.96 E-value=4.8e-29 Score=240.78 Aligned_cols=245 Identities=18% Similarity=0.166 Sum_probs=168.7
Q ss_pred CCcEEEECCchhHHHHHHhhhccCceEEEEcCCCcccc--chhhhhhhc---------------------------ccc-
Q 018704 62 KPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRNHMVF--TPLLASTCV---------------------------GTL- 111 (351)
Q Consensus 62 ~~~VvIIG~G~aGl~aA~~L~~~g~~v~vie~~~~~~~--~~~~~~~~~---------------------------~~~- 111 (351)
.|||+||||||+|++||.++++.|.+|+|||+...... ...+.+.|. |..
T Consensus 42 dYDviVIG~GpaG~~aA~~aa~~G~kValIE~~~~~~~~~k~~lGGtCln~GCIPsK~L~~aa~~~~~~~~~~~~~Gi~~ 121 (542)
T 4b1b_A 42 DYDYVVIGGGPGGMASAKEAAAHGARVLLFDYVKPSSQGTKWGIGGTCVNVGCVPKKLMHYAGHMGSIFKLDSKAYGWKF 121 (542)
T ss_dssp SEEEEEECCSHHHHHHHHHHHTTTCCEEEECCCCCCTTCCCCCSSHHHHHHSHHHHHHHHHHHHHHHHHHHTGGGGTEEE
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCCeEEEEeccccccccccCCCCCcccccchHHHHHHHHHHHHHHHHHhhhHhcCccc
Confidence 48999999999999999999999999999997542100 000111110 000
Q ss_pred -----cccccccchh-------ccchhhhcCCCeEEEEEEeeeEeCCCCEEEEEeecCccccCCCceeEeeccEEEEecC
Q 018704 112 -----EFRSVAEPIA-------RIQPAISREPGSYFFLSHCAGIDTDNHVVHCETVTDELRTLEPWKFKISYDKLVIALG 179 (351)
Q Consensus 112 -----~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~v~~i~~~~~~v~~~~~~~~~~~~~~~~~~~~~d~lviAtG 179 (351)
++..+..... ..........++.++.+...-++. +++.+....+.. +...++++++|||||
T Consensus 122 ~~~~~d~~~~~~~~~~~v~~l~~~~~~~l~~~~V~~i~G~a~f~~~--~~v~V~~~~~~~-----~~~~i~a~~iiIATG 194 (542)
T 4b1b_A 122 DNLKHDWKKLVTTVQSHIRSLNFSYMTGLRSSKVKYINGLAKLKDK--NTVSYYLKGDLS-----KEETVTGKYILIATG 194 (542)
T ss_dssp EEEEECHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEECEEEEEEET--TEEEEEEC--CC-----CEEEEEEEEEEECCC
T ss_pred CcccccHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEeeeEEEcCC--CcceEeecccCC-----ceEEEeeeeEEeccC
Confidence 0000000000 011112234467777776665554 444432211100 123899999999999
Q ss_pred CCcCCCCCCCcc-ccccccCCHHHHHHHHHHHHHhhhccCCCCCCHhhhcccCeEEEECCChHHHHHHHHHHHHHHHHHH
Q 018704 180 AEASTFGIHGVK-ENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVR 258 (351)
Q Consensus 180 ~~p~~p~i~g~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~v~VvGgG~~a~e~a~~l~~~~~~~~~ 258 (351)
++|..|+.++.+ +..+++++ .|.+..+|. +++|||||++|+|+|..+.++|
T Consensus 195 s~P~~P~~~~~~~~~~~ts~~-------------~l~l~~lP~----------~lvIIGgG~IGlE~A~~~~~lG----- 246 (542)
T 4b1b_A 195 CRPHIPDDVEGAKELSITSDD-------------IFSLKKDPG----------KTLVVGASYVALECSGFLNSLG----- 246 (542)
T ss_dssp EEECCCSSSBTHHHHCBCHHH-------------HTTCSSCCC----------SEEEECCSHHHHHHHHHHHHHT-----
T ss_pred CCCCCCCcccCCCccccCchh-------------hhccccCCc----------eEEEECCCHHHHHHHHHHHhcC-----
Confidence 999998654433 33333221 155677775 9999999999999999999998
Q ss_pred hhhcCCCCccEEEEEeCCCCCCCCcHHHHHHHHHHhhhcCcEEEcCe-EEEEeC--C--eEEecCCcEEeccEEEEecCC
Q 018704 259 QRYSHVKDYIHVTLIEANEILSSFDDRLRHYATTQLSKSGVRLVRGI-VKDVDS--Q--KLILNDGTEVPYGLLVWSTGV 333 (351)
Q Consensus 259 ~~~~~~~~~~~v~~~~~~~~l~~~~~~~~~~~~~~l~~~gV~~~~~~-v~~v~~--~--~v~~~~g~~~~~D~vi~a~G~ 333 (351)
.+||+++++++++.+|+++.+.+.+.+++.||+++++. +.+++. + .+.+.++.++++|.|++|+|+
T Consensus 247 ---------~~VTii~~~~~L~~~D~ei~~~l~~~l~~~gi~~~~~~~v~~~~~~~~~~~v~~~~~~~~~~D~vLvAvGR 317 (542)
T 4b1b_A 247 ---------YDVTVAVRSIVLRGFDQQCAVKVKLYMEEQGVMFKNGILPKKLTKMDDKILVEFSDKTSELYDTVLYAIGR 317 (542)
T ss_dssp ---------CCEEEEESSCSSTTSCHHHHHHHHHHHHHTTCEEEETCCEEEEEEETTEEEEEETTSCEEEESEEEECSCE
T ss_pred ---------CeEEEecccccccccchhHHHHHHHHHHhhcceeecceEEEEEEecCCeEEEEEcCCCeEEEEEEEEcccc
Confidence 99999999889999999999999999999999999995 777754 3 456678888999999999999
Q ss_pred CCc-cc--cccCCCCCCCCC
Q 018704 334 GPS-TL--VKSLDLPKSPGG 350 (351)
Q Consensus 334 ~p~-~~--~~~~gl~~~~~G 350 (351)
+|| +. ++.+|++++.+|
T Consensus 318 ~Pnt~~L~le~~gv~~~~~~ 337 (542)
T 4b1b_A 318 KGDIDGLNLESLNMNVNKSN 337 (542)
T ss_dssp EESCGGGCGGGTTCCEETTT
T ss_pred cCCccccCcccceeeecccC
Confidence 999 43 345566665443
No 34
>1ges_A Glutathione reductase; oxidoreductase(flavoenzyme); HET: FAD; 1.74A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1geu_A* 1ger_A* 1get_A*
Probab=99.96 E-value=1.3e-28 Score=234.49 Aligned_cols=237 Identities=19% Similarity=0.253 Sum_probs=169.9
Q ss_pred CCcEEEECCchhHHHHHHhhhccCceEEEEcCCCccccc------hh---hh-----hhh------cccc------cccc
Q 018704 62 KPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRNHMVFT------PL---LA-----STC------VGTL------EFRS 115 (351)
Q Consensus 62 ~~~VvIIG~G~aGl~aA~~L~~~g~~v~vie~~~~~~~~------~~---~~-----~~~------~~~~------~~~~ 115 (351)
++||+|||||++|+++|++|++.|++|+|||++...... |. +. ... .+.. .+..
T Consensus 4 ~~dvvIIGgG~aGl~aA~~l~~~g~~V~liE~~~~GG~~~~~gciP~k~l~~~a~~~~~~~~~~~~~g~~~~~~~~~~~~ 83 (450)
T 1ges_A 4 HYDYIAIGGGSGGIASINRAAMYGQKCALIEAKELGGTCVNVGCVPKKVMWHAAQIREAIHMYGPDYGFDTTINKFNWET 83 (450)
T ss_dssp EEEEEEECCSHHHHHHHHHHHTTTCCEEEEESSCTTHHHHHHSHHHHHHHHHHHHHHHHHHTTGGGGTEEEEEEEECHHH
T ss_pred cCCEEEECCCHHHHHHHHHHHhCCCeEEEEcCCCCCCcccccCccChHHHHHHHHHHHHHHHHHHhcCccCCCCccCHHH
Confidence 479999999999999999999999999999997421100 00 00 000 0000 0000
Q ss_pred cccc-------hhccchhhhcCCCeEEEEEEeeeEeCCCCEEEEEeecCccccCCCceeEeeccEEEEecCCCcCCCCCC
Q 018704 116 VAEP-------IARIQPAISREPGSYFFLSHCAGIDTDNHVVHCETVTDELRTLEPWKFKISYDKLVIALGAEASTFGIH 188 (351)
Q Consensus 116 ~~~~-------~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~v~~~~~~~~~~~~~~~~~~~~~d~lviAtG~~p~~p~i~ 188 (351)
+... +...........++.++...+..++. +.+.+ ++. .+.||+||||||+.|..|++|
T Consensus 84 l~~~~~~~~~~~~~~~~~~~~~~~v~~~~g~~~~i~~--~~v~~----~g~--------~~~~d~lviAtGs~p~~p~i~ 149 (450)
T 1ges_A 84 LIASRTAYIDRIHTSYENVLGKNNVDVIKGFARFVDA--KTLEV----NGE--------TITADHILIATGGRPSHPDIP 149 (450)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTTCEEEESCCEEEET--TEEEE----TTE--------EEEEEEEEECCCEEECCCCST
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCCEEEEeEEEEecC--CEEEE----CCE--------EEEeCEEEECCCCCCCCCCCC
Confidence 0000 00000111233578888887777764 45544 344 799999999999999999999
Q ss_pred CccccccccCCHHHHHHHHHHHHHhhhccCCCCCCHhhhcccCeEEEECCChHHHHHHHHHHHHHHHHHHhhhcCCCCcc
Q 018704 189 GVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYI 268 (351)
Q Consensus 189 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~v~VvGgG~~a~e~a~~l~~~~~~~~~~~~~~~~~~~ 268 (351)
|. +.++ +..++.. +... .++++|||||.+|+|+|..|.+++ .
T Consensus 150 g~-~~~~---~~~~~~~----------~~~~----------~~~vvViGgG~~g~e~A~~l~~~g--------------~ 191 (450)
T 1ges_A 150 GV-EYGI---DSDGFFA----------LPAL----------PERVAVVGAGYIGVELGGVINGLG--------------A 191 (450)
T ss_dssp TG-GGSB---CHHHHHH----------CSSC----------CSEEEEECCSHHHHHHHHHHHHTT--------------C
T ss_pred Cc-ccee---cHHHhhh----------hhhc----------CCeEEEECCCHHHHHHHHHHHhcC--------------C
Confidence 87 3332 2222211 1222 359999999999999999999887 8
Q ss_pred EEEEEeCC-CCCCCCcHHHHHHHHHHhhhcCcEEEcCe-EEEEeCC-----eEEecCCcEEeccEEEEecCCCCc-c-c-
Q 018704 269 HVTLIEAN-EILSSFDDRLRHYATTQLSKSGVRLVRGI-VKDVDSQ-----KLILNDGTEVPYGLLVWSTGVGPS-T-L- 338 (351)
Q Consensus 269 ~v~~~~~~-~~l~~~~~~~~~~~~~~l~~~gV~~~~~~-v~~v~~~-----~v~~~~g~~~~~D~vi~a~G~~p~-~-~- 338 (351)
+|+++++. .+++.+++++.+.+.+.+++.||+++++. |++++.+ .+.+.+|+++++|.||+|+|++|+ + +
T Consensus 192 ~Vtlv~~~~~~l~~~~~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~~~~v~~~~g~~i~~D~vv~a~G~~p~~~~l~ 271 (450)
T 1ges_A 192 KTHLFEMFDAPLPSFDPMISETLVEVMNAEGPQLHTNAIPKAVVKNTDGSLTLELEDGRSETVDCLIWAIGREPANDNIN 271 (450)
T ss_dssp EEEEECSSSSSSTTSCHHHHHHHHHHHHHHSCEEECSCCEEEEEECTTSCEEEEETTSCEEEESEEEECSCEEESCTTSC
T ss_pred EEEEEEeCCchhhhhhHHHHHHHHHHHHHCCCEEEeCCEEEEEEEeCCcEEEEEECCCcEEEcCEEEECCCCCcCCCCCC
Confidence 99999997 57788999999999999999999999995 9888642 577789989999999999999999 5 3
Q ss_pred cccCCCCCCCCC
Q 018704 339 VKSLDLPKSPGG 350 (351)
Q Consensus 339 ~~~~gl~~~~~G 350 (351)
++.+|++++++|
T Consensus 272 ~~~~gl~~~~~g 283 (450)
T 1ges_A 272 LEAAGVKTNEKG 283 (450)
T ss_dssp HHHHTCCBCTTS
T ss_pred chhcCceECCCC
Confidence 577788887666
No 35
>1onf_A GR, grase, glutathione reductase; oxidoreductase; HET: FAD; 2.60A {Plasmodium falciparum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=99.96 E-value=1.3e-28 Score=237.34 Aligned_cols=239 Identities=14% Similarity=0.199 Sum_probs=162.0
Q ss_pred CCcEEEECCchhHHHHHHhhhccCceEEEEcCCCcccc---chhhhh-----------hh-----ccccc--ccccc---
Q 018704 62 KPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRNHMVF---TPLLAS-----------TC-----VGTLE--FRSVA--- 117 (351)
Q Consensus 62 ~~~VvIIG~G~aGl~aA~~L~~~g~~v~vie~~~~~~~---~~~~~~-----------~~-----~~~~~--~~~~~--- 117 (351)
++||+|||||++|+++|..|++.|++|+|||+++.... ....+. .. .+... ..++.
T Consensus 2 ~~dVvIIGgG~aGl~aA~~l~~~g~~V~liE~~~~GG~c~~~gc~P~k~l~~~a~~~~~~~~~~~~g~~~~~~~~~~~~~ 81 (500)
T 1onf_A 2 VYDLIVIGGGSGGMAAARRAARHNAKVALVEKSRLGGTCVNVGCVPKKIMFNAASVHDILENSRHYGFDTKFSFNLPLLV 81 (500)
T ss_dssp CBSEEEECCSHHHHHHHHHHHHTTCCEEEEESSSTTHHHHHTSHHHHHHHHHHHHHHHHHHHGGGGTCCCCCCCCHHHHH
T ss_pred ccCEEEECCCHHHHHHHHHHHHCCCcEEEEeCCCcCccccccCCcchHHHHHHHHHHHHHHhhHhcCCccCCccCHHHHH
Confidence 47999999999999999999999999999999852100 000000 00 01000 00010
Q ss_pred -------cchhccchhhhcCCCeEEEEEEeeeEeCCCCEEEEEee----------cCccccCCCceeEeeccEEEEecCC
Q 018704 118 -------EPIARIQPAISREPGSYFFLSHCAGIDTDNHVVHCETV----------TDELRTLEPWKFKISYDKLVIALGA 180 (351)
Q Consensus 118 -------~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~v~~~~~----------~~~~~~~~~~~~~~~~d~lviAtG~ 180 (351)
..+...........++.++...+..++. +.+.+... .++. .+.||+||||||+
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~gv~~~~g~~~~id~--~~v~v~~~~~~~~~~~~~~~~~--------~~~~d~lViAtGs 151 (500)
T 1onf_A 82 ERRDKYIQRLNNIYRQNLSKDKVDLYEGTASFLSE--NRILIKGTKDNNNKDNGPLNEE--------ILEGRNILIAVGN 151 (500)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTCEEEESCCCCC------------------------------------CBSSEEECCCC
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCEEEEeEEEEeeC--CEEEEEeccccccccccCCCce--------EEEeCEEEECCCC
Confidence 0011111122234578888777666553 45544321 1133 7999999999999
Q ss_pred CcCCCCCCCccccccccCCHHHHHHHHHHHHHhhhccCCCCCCHhhhcccCeEEEECCChHHHHHHHHHHHHHHHHHHhh
Q 018704 181 EASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQR 260 (351)
Q Consensus 181 ~p~~p~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~v~VvGgG~~a~e~a~~l~~~~~~~~~~~ 260 (351)
.|..|++||.+ .+++ ..++ +.+.. .++++|||||.+|+|+|..|.+++
T Consensus 152 ~p~~p~i~G~~-~~~~---~~~~----------~~~~~-----------~~~vvViGgG~ig~E~A~~l~~~g------- 199 (500)
T 1onf_A 152 KPVFPPVKGIE-NTIS---SDEF----------FNIKE-----------SKKIGIVGSGYIAVELINVIKRLG------- 199 (500)
T ss_dssp CBCCCSCTTGG-GCEE---HHHH----------TTCCC-----------CSEEEEECCSHHHHHHHHHHHTTT-------
T ss_pred CCCCCCCCCCC-cccC---HHHH----------hccCC-----------CCeEEEECChHHHHHHHHHHHHcC-------
Confidence 99999999973 3332 2111 11111 359999999999999999999877
Q ss_pred hcCCCCccEEEEEeCC-CCCCCCcHHHHHHHHHHhhhcCcEEEcCe-EEEEeCC-----eEEecCCcE-EeccEEEEecC
Q 018704 261 YSHVKDYIHVTLIEAN-EILSSFDDRLRHYATTQLSKSGVRLVRGI-VKDVDSQ-----KLILNDGTE-VPYGLLVWSTG 332 (351)
Q Consensus 261 ~~~~~~~~~v~~~~~~-~~l~~~~~~~~~~~~~~l~~~gV~~~~~~-v~~v~~~-----~v~~~~g~~-~~~D~vi~a~G 332 (351)
.+|+++++. .+++.+++++.+.+.+.+++.||+++++. |++++.+ .+.+.+|++ +++|.||+|+|
T Consensus 200 -------~~Vtlv~~~~~~l~~~d~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~~~~~~v~~~~g~~~~~~D~vi~a~G 272 (500)
T 1onf_A 200 -------IDSYIFARGNRILRKFDESVINVLENDMKKNNINIVTFADVVEIKKVSDKNLSIHLSDGRIYEHFDHVIYCVG 272 (500)
T ss_dssp -------CEEEEECSSSSSCTTSCHHHHHHHHHHHHHTTCEEECSCCEEEEEESSTTCEEEEETTSCEEEEESEEEECCC
T ss_pred -------CeEEEEecCCccCcccchhhHHHHHHHHHhCCCEEEECCEEEEEEEcCCceEEEEECCCcEEEECCEEEECCC
Confidence 899999997 57888999999999999999999999995 9998642 477788988 99999999999
Q ss_pred CCCc-c-c-cccCCCCCCCCC
Q 018704 333 VGPS-T-L-VKSLDLPKSPGG 350 (351)
Q Consensus 333 ~~p~-~-~-~~~~gl~~~~~G 350 (351)
++|+ + + ++.+|+++ ++|
T Consensus 273 ~~p~~~~l~~~~~g~~~-~~G 292 (500)
T 1onf_A 273 RSPDTENLKLEKLNVET-NNN 292 (500)
T ss_dssp BCCTTTTSSCTTTTCCB-SSS
T ss_pred CCcCCCCCCchhcCccc-cCC
Confidence 9999 4 4 57888887 455
No 36
>2r9z_A Glutathione amide reductase; NAD, FAD, substrate specificity, oxidoreductase; HET: FAD; 2.10A {Marichromatium gracile} PDB: 2rab_A*
Probab=99.96 E-value=1.2e-28 Score=235.43 Aligned_cols=236 Identities=19% Similarity=0.279 Sum_probs=169.1
Q ss_pred CCcEEEECCchhHHHHHHhhhccCceEEEEcCCCccccchh----hhh-----------hh-----ccccc---ccccc-
Q 018704 62 KPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRNHMVFTPL----LAS-----------TC-----VGTLE---FRSVA- 117 (351)
Q Consensus 62 ~~~VvIIG~G~aGl~aA~~L~~~g~~v~vie~~~~~~~~~~----~~~-----------~~-----~~~~~---~~~~~- 117 (351)
++||+|||||++|+++|.+|++.|++|+|||++.. ..... .+. .. .+... ..++.
T Consensus 4 ~~dVvIIGgG~aGl~aA~~l~~~g~~V~liE~~~~-GG~~~~~gciP~k~l~~~a~~~~~~~~~~~~g~~~~~~~~~~~~ 82 (463)
T 2r9z_A 4 HFDLIAIGGGSGGLAVAEKAAAFGKRVALIESKAL-GGTCVNVGCVPKKVMWYASHLAEAVRDAPGFGVQASGGTLDWPR 82 (463)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSCT-THHHHHHSHHHHHHHHHHHHHHHHHHHGGGGTBCCC---CCHHH
T ss_pred cCcEEEECCCHHHHHHHHHHHhCCCcEEEEcCCCC-CCcCcCcCchhHHHHHHHHHHHHHHhhhhhcCcccCCCCcCHHH
Confidence 58999999999999999999999999999999742 11100 000 00 00000 00000
Q ss_pred --cc-------hhccchhhhcCCCeEEEEEEeeeEeCCCCEEEEEeecCccccCCCceeEeeccEEEEecCCCcCCCCCC
Q 018704 118 --EP-------IARIQPAISREPGSYFFLSHCAGIDTDNHVVHCETVTDELRTLEPWKFKISYDKLVIALGAEASTFGIH 188 (351)
Q Consensus 118 --~~-------~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~v~~~~~~~~~~~~~~~~~~~~~d~lviAtG~~p~~p~i~ 188 (351)
.. +...........++.++...+..++. +.+.+ ++. .+.||+||||||+.|..|++|
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~gv~~~~g~~~~i~~--~~v~~----~g~--------~~~~d~lviAtGs~p~~p~i~ 148 (463)
T 2r9z_A 83 LVAGRDRYIGAINSFWDGYVERLGITRVDGHARFVDA--HTIEV----EGQ--------RLSADHIVIATGGRPIVPRLP 148 (463)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTTCEEEESCEEEEET--TEEEE----TTE--------EEEEEEEEECCCEEECCCSCT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHCCCEEEEeEEEEccC--CEEEE----CCE--------EEEcCEEEECCCCCCCCCCCC
Confidence 00 00001111234578888877766653 45554 344 799999999999999999999
Q ss_pred CccccccccCCHHHHHHHHHHHHHhhhccCCCCCCHhhhcccCeEEEECCChHHHHHHHHHHHHHHHHHHhhhcCCCCcc
Q 018704 189 GVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYI 268 (351)
Q Consensus 189 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~v~VvGgG~~a~e~a~~l~~~~~~~~~~~~~~~~~~~ 268 (351)
|. +.++ +..++.. +... .++++|||||.+|+|+|..|.+++ .
T Consensus 149 G~-~~~~---~~~~~~~----------~~~~----------~~~vvVvGgG~~g~e~A~~l~~~G--------------~ 190 (463)
T 2r9z_A 149 GA-ELGI---TSDGFFA----------LQQQ----------PKRVAIIGAGYIGIELAGLLRSFG--------------S 190 (463)
T ss_dssp TG-GGSB---CHHHHHH----------CSSC----------CSEEEEECCSHHHHHHHHHHHHTT--------------C
T ss_pred Cc-ccee---cHHHHhh----------hhcc----------CCEEEEECCCHHHHHHHHHHHhcC--------------C
Confidence 97 3332 2222211 1122 359999999999999999999887 8
Q ss_pred EEEEEeCC-CCCCCCcHHHHHHHHHHhhhcCcEEEcCe-EEEEeCC----eEEecCCc-EEeccEEEEecCCCCc-c-c-
Q 018704 269 HVTLIEAN-EILSSFDDRLRHYATTQLSKSGVRLVRGI-VKDVDSQ----KLILNDGT-EVPYGLLVWSTGVGPS-T-L- 338 (351)
Q Consensus 269 ~v~~~~~~-~~l~~~~~~~~~~~~~~l~~~gV~~~~~~-v~~v~~~----~v~~~~g~-~~~~D~vi~a~G~~p~-~-~- 338 (351)
+|+++++. .+++.+++++.+.+.+.+++.||+++.+. |++++.+ .+.+.+|+ ++++|.||+|+|++|+ + +
T Consensus 191 ~Vtlv~~~~~~l~~~~~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~~~~~v~~~~G~~~i~~D~vv~a~G~~p~~~~l~ 270 (463)
T 2r9z_A 191 EVTVVALEDRLLFQFDPLLSATLAENMHAQGIETHLEFAVAALERDAQGTTLVAQDGTRLEGFDSVIWAVGRAPNTRDLG 270 (463)
T ss_dssp EEEEECSSSSSSTTSCHHHHHHHHHHHHHTTCEEESSCCEEEEEEETTEEEEEETTCCEEEEESEEEECSCEEESCTTSC
T ss_pred EEEEEEcCCccccccCHHHHHHHHHHHHHCCCEEEeCCEEEEEEEeCCeEEEEEeCCcEEEEcCEEEECCCCCcCCCCCC
Confidence 99999997 57788999999999999999999999995 9888642 57778998 8999999999999999 5 3
Q ss_pred cccCCCCCCCCC
Q 018704 339 VKSLDLPKSPGG 350 (351)
Q Consensus 339 ~~~~gl~~~~~G 350 (351)
++.+|++++++|
T Consensus 271 ~~~~g~~~~~~G 282 (463)
T 2r9z_A 271 LEAAGIEVQSNG 282 (463)
T ss_dssp HHHHTCCCCTTS
T ss_pred chhcCCccCCCC
Confidence 466788877665
No 37
>3dgh_A TRXR-1, thioredoxin reductase 1, mitochondrial; oxidoreductase, rossmann, flavoprotein, alternative initiati mitochondrion, NADP; HET: FAD; 1.75A {Drosophila melanogaster} PDB: 2nvk_X* 3dh9_A*
Probab=99.96 E-value=1.1e-28 Score=237.11 Aligned_cols=241 Identities=17% Similarity=0.206 Sum_probs=168.4
Q ss_pred CCCCcEEEECCchhHHHHHHhhhccCceEEEEcCCCc---------cccchhhhhhh---------------------cc
Q 018704 60 NEKPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRNH---------MVFTPLLASTC---------------------VG 109 (351)
Q Consensus 60 ~~~~~VvIIG~G~aGl~aA~~L~~~g~~v~vie~~~~---------~~~~~~~~~~~---------------------~~ 109 (351)
...+||+|||||++|++||..|++.|++|+|||+... +.. .++...| .+
T Consensus 7 ~~~~DvvVIGgG~aGl~aA~~la~~G~~V~liEk~~~~~~~~~~~~~GG-~c~~~gciPsk~l~~~~~~~~~~~~~~~~g 85 (483)
T 3dgh_A 7 SYDYDLIVIGGGSAGLACAKEAVLNGARVACLDFVKPTPTLGTKWGVGG-TCVNVGCIPKKLMHQASLLGEAVHEAAAYG 85 (483)
T ss_dssp CCSEEEEEECCSHHHHHHHHHHHHTTCCEEEECCCCCCTTTTCCCCSSC-HHHHHSHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred CCCCCEEEECcCHHHHHHHHHHHHCCCEEEEEEeccccccccccCCcCC-eecccCchhhHHHHHHHHHHHHHHHHHhcC
Confidence 3468999999999999999999999999999994211 110 0000000 01
Q ss_pred cccc----cccc---cchhcc-------chhhhcCCCeEEEEEEeeeEeCCCCEEEEEeecCccccCCCceeEeeccEEE
Q 018704 110 TLEF----RSVA---EPIARI-------QPAISREPGSYFFLSHCAGIDTDNHVVHCETVTDELRTLEPWKFKISYDKLV 175 (351)
Q Consensus 110 ~~~~----~~~~---~~~~~~-------~~~~~~~~~~~~~~~~v~~i~~~~~~v~~~~~~~~~~~~~~~~~~~~~d~lv 175 (351)
.... .++. ...... ........++.++...+..++.. .+.+.. .++. ..+.||+||
T Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~g~a~~~~~~--~v~v~~-~~g~-------~~~~~d~lv 155 (483)
T 3dgh_A 86 WNVDDKIKPDWHKLVQSVQNHIKSVNWVTRVDLRDKKVEYINGLGSFVDSH--TLLAKL-KSGE-------RTITAQTFV 155 (483)
T ss_dssp BCCCCCCCBCHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEECSEEEEEETT--EEEEEC-TTCC-------EEEEEEEEE
T ss_pred cccCCcCccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeEEEEccCC--EEEEEe-CCCe-------EEEEcCEEE
Confidence 1000 0110 001111 01122334677777777666543 444432 2332 279999999
Q ss_pred EecCCCcCCCCCCCccccccccCCHHHHHHHHHHHHHhhhccCCCCCCHhhhcccCeEEEECCChHHHHHHHHHHHHHHH
Q 018704 176 IALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMR 255 (351)
Q Consensus 176 iAtG~~p~~p~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~v~VvGgG~~a~e~a~~l~~~~~~ 255 (351)
||||+.|+.|++||.++..++ ..+. +.+...| ++++|||||.+|+|+|..|.+++
T Consensus 156 iATGs~p~~p~i~G~~~~~~~---~~~~----------~~~~~~~----------~~vvViGgG~~g~E~A~~l~~~g-- 210 (483)
T 3dgh_A 156 IAVGGRPRYPDIPGAVEYGIT---SDDL----------FSLDREP----------GKTLVVGAGYIGLECAGFLKGLG-- 210 (483)
T ss_dssp ECCCEEECCCSSTTHHHHCBC---HHHH----------TTCSSCC----------CEEEEECCSHHHHHHHHHHHHTT--
T ss_pred EeCCCCcCCCCCCCcccccCc---HHHH----------hhhhhcC----------CcEEEECCCHHHHHHHHHHHHcC--
Confidence 999999999999997544332 1111 1222333 49999999999999999999887
Q ss_pred HHHhhhcCCCCccEEEEEeCCCCCCCCcHHHHHHHHHHhhhcCcEEEcCe-EEEEeC--C---eEEecCCc-----EEec
Q 018704 256 DVRQRYSHVKDYIHVTLIEANEILSSFDDRLRHYATTQLSKSGVRLVRGI-VKDVDS--Q---KLILNDGT-----EVPY 324 (351)
Q Consensus 256 ~~~~~~~~~~~~~~v~~~~~~~~l~~~~~~~~~~~~~~l~~~gV~~~~~~-v~~v~~--~---~v~~~~g~-----~~~~ 324 (351)
.+|+++++..+++.+++++.+.+.+.+++.||+++.+. |.+++. + .+.+.++. ++++
T Consensus 211 ------------~~Vtlv~~~~~l~~~d~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~~~~v~~~~~~~~~~~~~~~ 278 (483)
T 3dgh_A 211 ------------YEPTVMVRSIVLRGFDQQMAELVAASMEERGIPFLRKTVPLSVEKQDDGKLLVKYKNVETGEESEDVY 278 (483)
T ss_dssp ------------CEEEEEESSCSSTTSCHHHHHHHHHHHHHTTCCEEETEEEEEEEECTTSCEEEEEEETTTCCEEEEEE
T ss_pred ------------CEEEEEeCCCCCcccCHHHHHHHHHHHHhCCCEEEeCCEEEEEEEcCCCcEEEEEecCCCCceeEEEc
Confidence 89999999888899999999999999999999999995 888864 2 36666553 6899
Q ss_pred cEEEEecCCCCc-ccc--ccCCCCCCC
Q 018704 325 GLLVWSTGVGPS-TLV--KSLDLPKSP 348 (351)
Q Consensus 325 D~vi~a~G~~p~-~~~--~~~gl~~~~ 348 (351)
|.||+|+|++|+ +++ +.+|+++++
T Consensus 279 D~vi~a~G~~p~~~~l~l~~~gl~~~~ 305 (483)
T 3dgh_A 279 DTVLWAIGRKGLVDDLNLPNAGVTVQK 305 (483)
T ss_dssp SEEEECSCEEECCGGGTGGGTTCCCBT
T ss_pred CEEEECcccccCcCcCCchhcCccccC
Confidence 999999999999 665 777888776
No 38
>1xdi_A RV3303C-LPDA; reductase, FAD, NAD, NADP, unkno function; HET: FAD; 2.81A {Mycobacterium tuberculosis} SCOP: c.3.1.5 d.87.1.1
Probab=99.96 E-value=1.7e-28 Score=236.69 Aligned_cols=244 Identities=21% Similarity=0.252 Sum_probs=173.8
Q ss_pred CCcEEEECCchhHHHHHHhhhcc---CceEEEEcCCCccccc-------h---hhhh-----h-----hccccc-c----
Q 018704 62 KPRVVVLGSGWAGCRLMKGIDTS---LYDVVCVSPRNHMVFT-------P---LLAS-----T-----CVGTLE-F---- 113 (351)
Q Consensus 62 ~~~VvIIG~G~aGl~aA~~L~~~---g~~v~vie~~~~~~~~-------~---~~~~-----~-----~~~~~~-~---- 113 (351)
++||+|||||++|+++|++|++. |++|+|||+++ +... | ++.. . ..+... .
T Consensus 2 ~~dVvIIGgG~aGl~aA~~l~~~~~~G~~V~liE~~~-~GG~~~~~g~~psk~l~~~a~~~~~~~~~~~~g~~~~~~~~~ 80 (499)
T 1xdi_A 2 VTRIVILGGGPAGYEAALVAATSHPETTQVTVIDCDG-IGGAAVLDDCVPSKTFIASTGLRTELRRAPHLGFHIDFDDAK 80 (499)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHCTTTEEEEEEESSC-TTHHHHHTSHHHHHHHHHHHHHHHHHTTTTTTTBC------C
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCCcCEEEEEeCCC-cCCcccCcCccchHHHHHHHHHHHHHHHHHhCCCccccCCCc
Confidence 47999999999999999999998 99999999986 2111 0 0000 0 001110 0
Q ss_pred cccccc----------hhccchhhhcCCCeEEEEEEeeeEeCC----CCEEEEEeecCccccCCCceeEeeccEEEEecC
Q 018704 114 RSVAEP----------IARIQPAISREPGSYFFLSHCAGIDTD----NHVVHCETVTDELRTLEPWKFKISYDKLVIALG 179 (351)
Q Consensus 114 ~~~~~~----------~~~~~~~~~~~~~~~~~~~~v~~i~~~----~~~v~~~~~~~~~~~~~~~~~~~~~d~lviAtG 179 (351)
.++... +......+....++.++...+..++.. .+.+.+.. .+++ ...+.||+||+|||
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~g~~~~i~~~~~~~~~~~~V~~-~~g~------~~~~~~d~lviATG 153 (499)
T 1xdi_A 81 ISLPQIHARVKTLAAAQSADITAQLLSMGVQVIAGRGELIDSTPGLARHRIKATA-ADGS------TSEHEADVVLVATG 153 (499)
T ss_dssp BCHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEESEEEECCSSSCCSSEEEEEEC-TTSC------EEEEEESEEEECCC
T ss_pred cCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeEEEEecCcccCCCCEEEEEe-CCCc------EEEEEeCEEEEcCC
Confidence 001000 111112223345788888888777763 35565543 2231 12689999999999
Q ss_pred CCcCCCCCCCcccc-ccccCCHHHHHHHHHHHHHhhhccCCCCCCHhhhcccCeEEEECCChHHHHHHHHHHHHHHHHHH
Q 018704 180 AEASTFGIHGVKEN-ATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVR 258 (351)
Q Consensus 180 ~~p~~p~i~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~v~VvGgG~~a~e~a~~l~~~~~~~~~ 258 (351)
+.|..|++||.+.. +++..+.. .+.. ..++++|||+|.+|+|+|..+.+++
T Consensus 154 s~p~~p~i~g~~~~~v~~~~~~~-------------~~~~----------~~~~vvViGgG~ig~E~A~~l~~~g----- 205 (499)
T 1xdi_A 154 ASPRILPSAQPDGERILTWRQLY-------------DLDA----------LPDHLIVVGSGVTGAEFVDAYTELG----- 205 (499)
T ss_dssp EEECCCGGGCCCSSSEEEGGGGG-------------GCSS----------CCSSEEEESCSHHHHHHHHHHHHTT-----
T ss_pred CCCCCCCCCCCCcCcEEehhHhh-------------hhhc----------cCCeEEEECCCHHHHHHHHHHHHcC-----
Confidence 99999989987532 33332221 1111 2259999999999999999999887
Q ss_pred hhhcCCCCccEEEEEeCC-CCCCCCcHHHHHHHHHHhhhcCcEEEcCe-EEEEeCC----eEEecCCcEEeccEEEEecC
Q 018704 259 QRYSHVKDYIHVTLIEAN-EILSSFDDRLRHYATTQLSKSGVRLVRGI-VKDVDSQ----KLILNDGTEVPYGLLVWSTG 332 (351)
Q Consensus 259 ~~~~~~~~~~~v~~~~~~-~~l~~~~~~~~~~~~~~l~~~gV~~~~~~-v~~v~~~----~v~~~~g~~~~~D~vi~a~G 332 (351)
.+|+++++. .+++.+++++.+.+.+.+++.||+++++. |++++.+ .+.+.+|+++++|.||+|+|
T Consensus 206 ---------~~Vtlv~~~~~~l~~~d~~~~~~l~~~l~~~GV~i~~~~~V~~i~~~~~~v~v~~~~g~~i~aD~Vv~a~G 276 (499)
T 1xdi_A 206 ---------VPVTVVASQDHVLPYEDADAALVLEESFAERGVRLFKNARAASVTRTGAGVLVTMTDGRTVEGSHALMTIG 276 (499)
T ss_dssp ---------CCEEEECSSSSSSCCSSHHHHHHHHHHHHHTTCEEETTCCEEEEEECSSSEEEEETTSCEEEESEEEECCC
T ss_pred ---------CeEEEEEcCCccccccCHHHHHHHHHHHHHCCCEEEeCCEEEEEEEeCCEEEEEECCCcEEEcCEEEECCC
Confidence 899999997 57788999999999999999999999995 9988753 34556888999999999999
Q ss_pred CCCc-cc--cccCCCCCCCCC
Q 018704 333 VGPS-TL--VKSLDLPKSPGG 350 (351)
Q Consensus 333 ~~p~-~~--~~~~gl~~~~~G 350 (351)
++|+ ++ ++.+|++++++|
T Consensus 277 ~~p~~~~l~l~~~gl~~~~~G 297 (499)
T 1xdi_A 277 SVPNTSGLGLERVGIQLGRGN 297 (499)
T ss_dssp EEECCSSSCTTTTTCCCBTTT
T ss_pred CCcCCCcCCchhcCceECCCC
Confidence 9999 67 778888887766
No 39
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum}
Probab=99.96 E-value=2.5e-28 Score=222.04 Aligned_cols=238 Identities=16% Similarity=0.186 Sum_probs=163.7
Q ss_pred CCCcEEEECCchhHHHHHHhhhccCceEEEEcCCCccccchhhhhhhccccccccc-ccchhccchhhhcCCCeEEEEEE
Q 018704 61 EKPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRNHMVFTPLLASTCVGTLEFRSV-AEPIARIQPAISREPGSYFFLSH 139 (351)
Q Consensus 61 ~~~~VvIIG~G~aGl~aA~~L~~~g~~v~vie~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 139 (351)
+.+||+|||||++|+++|..|++.|++|+|||+..... ...........+.+... ...+...........++.++..+
T Consensus 15 ~~~dvvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~gg-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~ 93 (319)
T 3cty_A 15 RDFDVVIVGAGAAGFSAAVYAARSGFSVAILDKAVAGG-LTAEAPLVENYLGFKSIVGSELAKLFADHAANYAKIREGVE 93 (319)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSTTG-GGGGCSCBCCBTTBSSBCHHHHHHHHHHHHHTTSEEEETCC
T ss_pred CCCcEEEECcCHHHHHHHHHHHhCCCcEEEEeCCCCCc-cccccchhhhcCCCcccCHHHHHHHHHHHHHHcCCEEEEee
Confidence 35799999999999999999999999999999853211 00000000000111000 01122222223344577777788
Q ss_pred eeeEeCCCCEEEEEeecCccccCCCceeEeeccEEEEecCCCcCCCCCCCcccc---ccccCCHHHHHHHHHHHHHhhhc
Q 018704 140 CAGIDTDNHVVHCETVTDELRTLEPWKFKISYDKLVIALGAEASTFGIHGVKEN---ATFLREVHHAQEIRRKLLLNLML 216 (351)
Q Consensus 140 v~~i~~~~~~v~~~~~~~~~~~~~~~~~~~~~d~lviAtG~~p~~p~i~g~~~~---~~~~~~~~~~~~~~~~~~~~~~~ 216 (351)
|..++.+.+.+.+.. ++. .+.||+||+|||+.|+.|++||.+.. ..+. .... ...
T Consensus 94 v~~i~~~~~~~~v~~--~~~--------~~~~~~li~AtG~~~~~~~i~g~~~~~~~~~~~--~~~~---~~~------- 151 (319)
T 3cty_A 94 VRSIKKTQGGFDIET--NDD--------TYHAKYVIITTGTTHKHLGVKGESEYFGKGTSY--CSTC---DGY------- 151 (319)
T ss_dssp EEEEEEETTEEEEEE--SSS--------EEEEEEEEECCCEEECCCCCBTTTTTBTTTEES--CHHH---HGG-------
T ss_pred EEEEEEeCCEEEEEE--CCC--------EEEeCEEEECCCCCcccCCCCChHHhCCceEEE--EEec---chh-------
Confidence 999988777666643 444 79999999999999999999887431 1111 1111 110
Q ss_pred cCCCCCCHhhhcccCeEEEECCChHHHHHHHHHHHHHHHHHHhhhcCCCCccEEEEEeCCCCCCCCcHHHHHHHHHHhhh
Q 018704 217 SDVPGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEILSSFDDRLRHYATTQLSK 296 (351)
Q Consensus 217 ~~~p~~~~~~~~~~~~v~VvGgG~~a~e~a~~l~~~~~~~~~~~~~~~~~~~~v~~~~~~~~l~~~~~~~~~~~~~~l~~ 296 (351)
....++++|||+|.+|+|+|..|.+++ .+|+++++.+.+. .++ .+.+.+++
T Consensus 152 ----------~~~~~~v~viG~G~~g~e~a~~l~~~g--------------~~V~~i~~~~~~~-~~~----~l~~~l~~ 202 (319)
T 3cty_A 152 ----------LFKGKRVVTIGGGNSGAIAAISMSEYV--------------KNVTIIEYMPKYM-CEN----AYVQEIKK 202 (319)
T ss_dssp ----------GGBTSEEEEECCSHHHHHHHHHHTTTB--------------SEEEEECSSSSCC-SCH----HHHHHHHH
T ss_pred ----------hcCCCeEEEECCCHHHHHHHHHHHhhC--------------CcEEEEEcCCccC-CCH----HHHHHHhc
Confidence 023469999999999999999998776 8999999975432 222 34455668
Q ss_pred cCcEEEcCe-EEEEeCC-----eEEec---CCc--EEeccEEEEecCCCCc-cccccCCCCCCCCC
Q 018704 297 SGVRLVRGI-VKDVDSQ-----KLILN---DGT--EVPYGLLVWSTGVGPS-TLVKSLDLPKSPGG 350 (351)
Q Consensus 297 ~gV~~~~~~-v~~v~~~-----~v~~~---~g~--~~~~D~vi~a~G~~p~-~~~~~~gl~~~~~G 350 (351)
.||+++.+. |+++..+ ++.+. +|+ ++++|.||+|+|+.|+ ++++.+|++++++|
T Consensus 203 ~gv~i~~~~~v~~i~~~~~~v~~v~~~~~~~g~~~~i~~D~vi~a~G~~p~~~~l~~~gl~~~~~g 268 (319)
T 3cty_A 203 RNIPYIMNAQVTEIVGDGKKVTGVKYKDRTTGEEKLIETDGVFIYVGLIPQTSFLKDSGVKLDERG 268 (319)
T ss_dssp TTCCEECSEEEEEEEESSSSEEEEEEEETTTCCEEEECCSEEEECCCEEECCGGGTTSCCCBCTTS
T ss_pred CCcEEEcCCeEEEEecCCceEEEEEEEEcCCCceEEEecCEEEEeeCCccChHHHhhccccccCCc
Confidence 899999995 8888753 46665 675 6899999999999999 89988888887665
No 40
>1zmd_A Dihydrolipoyl dehydrogenase; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha- ketoglutarate dehydrogenase; HET: FAD NAI; 2.08A {Homo sapiens} PDB: 1zmc_A* 2f5z_A* 1zy8_A* 3rnm_A*
Probab=99.96 E-value=2.2e-28 Score=234.50 Aligned_cols=244 Identities=18% Similarity=0.202 Sum_probs=170.6
Q ss_pred CCCcEEEECCchhHHHHHHhhhccCceEEEEcCCCccccch----------hhh-----------h-hhcccccc---cc
Q 018704 61 EKPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRNHMVFTP----------LLA-----------S-TCVGTLEF---RS 115 (351)
Q Consensus 61 ~~~~VvIIG~G~aGl~aA~~L~~~g~~v~vie~~~~~~~~~----------~~~-----------~-~~~~~~~~---~~ 115 (351)
.++||+|||||++|+++|..|++.|++|+|||+++.+.... ++. . ...+.... .+
T Consensus 5 ~~~dvvIIGgG~aGl~aA~~l~~~g~~V~liE~~~~~GG~~~~~g~~Psk~l~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 84 (474)
T 1zmd_A 5 IDADVTVIGSGPGGYVAAIKAAQLGFKTVCIEKNETLGGTCLNVGCIPSKALLNNSHYYHMAHGTDFASRGIEMSEVRLN 84 (474)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSSSSHHHHHHSHHHHHHHHHHHHHHHHHHSSHHHHTTEEESCEEEC
T ss_pred CCCCEEEECCCHHHHHHHHHHHhCCCeEEEEeCCCCcCCcccccCccchHHHHHHHHHHHHhhhhhHhhCccccCCCccC
Confidence 34799999999999999999999999999999986542110 000 0 00011000 00
Q ss_pred cccc----------hhccchhhhcCCCeEEEEEEeeeEeCCCCEEEEEeecCccccCCCceeEeeccEEEEecCCCcCCC
Q 018704 116 VAEP----------IARIQPAISREPGSYFFLSHCAGIDTDNHVVHCETVTDELRTLEPWKFKISYDKLVIALGAEASTF 185 (351)
Q Consensus 116 ~~~~----------~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~v~~~~~~~~~~~~~~~~~~~~~d~lviAtG~~p~~p 185 (351)
+... +...........++.++...+..++. +.+.+...+++. .++.||+||+|||+.|..|
T Consensus 85 ~~~~~~~~~~~~~~l~~~~~~~~~~~gv~~~~g~~~~~~~--~~~~v~~~~gg~-------~~~~~d~lViAtGs~p~~p 155 (474)
T 1zmd_A 85 LDKMMEQKSTAVKALTGGIAHLFKQNKVVHVNGYGKITGK--NQVTATKADGGT-------QVIDTKNILIATGSEVTPF 155 (474)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEESEEEEEET--TEEEEECTTSCE-------EEEEEEEEEECCCEEECCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEEEEEEecC--CEEEEEecCCCc-------EEEEeCEEEECCCCCCCCC
Confidence 0000 00001122334578888777776654 455554322121 2799999999999999999
Q ss_pred CCCCcccc-ccccCCHHHHHHHHHHHHHhhhccCCCCCCHhhhcccCeEEEECCChHHHHHHHHHHHHHHHHHHhhhcCC
Q 018704 186 GIHGVKEN-ATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHV 264 (351)
Q Consensus 186 ~i~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~v~VvGgG~~a~e~a~~l~~~~~~~~~~~~~~~ 264 (351)
+++|.+.. ++ +..++. .+...| ++++|||||.+|+|+|..|.+++
T Consensus 156 ~i~g~~~~~v~---t~~~~~----------~~~~~~----------~~vvViGgG~~g~E~A~~l~~~g----------- 201 (474)
T 1zmd_A 156 PGITIDEDTIV---SSTGAL----------SLKKVP----------EKMVVIGAGVIGVELGSVWQRLG----------- 201 (474)
T ss_dssp TTCCCCSSSEE---CHHHHT----------TCSSCC----------SEEEEECCSHHHHHHHHHHHHTT-----------
T ss_pred CCCCCCcCcEE---cHHHHh----------hccccC----------ceEEEECCCHHHHHHHHHHHHcC-----------
Confidence 99987532 22 222221 112222 59999999999999999999887
Q ss_pred CCccEEEEEeCC-CCCC-CCcHHHHHHHHHHhhhcCcEEEcCe-EEEEeCC--e-EEe-------cCCcEEeccEEEEec
Q 018704 265 KDYIHVTLIEAN-EILS-SFDDRLRHYATTQLSKSGVRLVRGI-VKDVDSQ--K-LIL-------NDGTEVPYGLLVWST 331 (351)
Q Consensus 265 ~~~~~v~~~~~~-~~l~-~~~~~~~~~~~~~l~~~gV~~~~~~-v~~v~~~--~-v~~-------~~g~~~~~D~vi~a~ 331 (351)
.+|+++++. .+++ .+++++.+.+.+.+++.||+++.+. |++++.+ + +.+ .+++++++|.||+|+
T Consensus 202 ---~~Vtlv~~~~~~l~~~~~~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~~~~v~~~~~~~~~~~~i~~D~vv~a~ 278 (474)
T 1zmd_A 202 ---ADVTAVEFLGHVGGVGIDMEISKNFQRILQKQGFKFKLNTKVTGATKKSDGKIDVSIEAASGGKAEVITCDVLLVCI 278 (474)
T ss_dssp ---CEEEEECSSSSSSCSSCCHHHHHHHHHHHHHTTCEEECSEEEEEEEECTTSCEEEEEEETTSCCCEEEEESEEEECS
T ss_pred ---CEEEEEeccCccCCcccCHHHHHHHHHHHHHCCCEEEeCceEEEEEEcCCceEEEEEEecCCCCceEEEcCEEEECc
Confidence 899999997 5777 8999999999999999999999995 9998742 2 433 356789999999999
Q ss_pred CCCCc-cc--cccCCCCCCCCC
Q 018704 332 GVGPS-TL--VKSLDLPKSPGG 350 (351)
Q Consensus 332 G~~p~-~~--~~~~gl~~~~~G 350 (351)
|++|+ ++ ++.+|++++++|
T Consensus 279 G~~p~~~~l~l~~~g~~~~~~G 300 (474)
T 1zmd_A 279 GRRPFTKNLGLEELGIELDPRG 300 (474)
T ss_dssp CEEECCTTSSHHHHTCCCCTTS
T ss_pred CCCcCCCcCCchhcCCccCCCC
Confidence 99999 66 677788877665
No 41
>1zk7_A HGII, reductase, mercuric reductase; mercuric ION reductase, oxidoreductase; HET: FAD; 1.60A {Pseudomonas aeruginosa} PDB: 1zx9_A*
Probab=99.96 E-value=6.4e-28 Score=230.82 Aligned_cols=242 Identities=16% Similarity=0.137 Sum_probs=169.0
Q ss_pred CCCcEEEECCchhHHHHHHhhhccCceEEEEcCCCccccchhh---------------hhhhc------ccc------cc
Q 018704 61 EKPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRNHMVFTPLL---------------ASTCV------GTL------EF 113 (351)
Q Consensus 61 ~~~~VvIIG~G~aGl~aA~~L~~~g~~v~vie~~~~~~~~~~~---------------~~~~~------~~~------~~ 113 (351)
.++||+|||||++|+++|++|++.|++|+|||++. +...... ..... +.. .+
T Consensus 3 ~~~dvvIIGgG~aGl~aA~~l~~~g~~V~lie~~~-~GG~~~~~g~ip~k~l~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 81 (467)
T 1zk7_A 3 PPVQVAVIGSGGAAMAAALKAVEQGAQVTLIERGT-IGGTCVNVGCVPSKIMIRAAHIAHLRRESPFDGGIAATVPTIDR 81 (467)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSS-TTHHHHHHSHHHHHHHHHHHHHHHHHHCCTTTTTSCCCCCCCCH
T ss_pred CcCCEEEECCCHHHHHHHHHHHHCCCEEEEEeCCC-CCccccCCCccchHHHHHHHHHHHHHhhhhhcCCccCCCCccCH
Confidence 35899999999999999999999999999999873 2110000 00000 110 00
Q ss_pred ccccc-------chhc-cchhhhcCC-CeEEEEEEeeeEeCCCCEEEEEeecCccccCCCceeEeeccEEEEecCCCcCC
Q 018704 114 RSVAE-------PIAR-IQPAISREP-GSYFFLSHCAGIDTDNHVVHCETVTDELRTLEPWKFKISYDKLVIALGAEAST 184 (351)
Q Consensus 114 ~~~~~-------~~~~-~~~~~~~~~-~~~~~~~~v~~i~~~~~~v~~~~~~~~~~~~~~~~~~~~~d~lviAtG~~p~~ 184 (351)
..+.. .+.. ....+.... ++.++...+..++.. .+.+.. .+++ ...+.||+||||||+.|+.
T Consensus 82 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~v~~~~g~~~~~~~~--~~~v~~-~~g~------~~~~~~d~lviAtGs~p~~ 152 (467)
T 1zk7_A 82 SKLLAQQQARVDELRHAKYEGILGGNPAITVVHGEARFKDDQ--SLTVRL-NEGG------ERVVMFDRCLVATGASPAV 152 (467)
T ss_dssp HHHHHHHHHHHHHHHHHHTHHHHTTCTTEEEEEEEEEEEETT--EEEEEE-TTSS------EEEEECSEEEECCCEEECC
T ss_pred HHHHHHHHHHHHHHhhhhHHHHHhccCCeEEEEEEEEEccCC--EEEEEe-CCCc------eEEEEeCEEEEeCCCCCCC
Confidence 00000 0000 011222334 888888888888754 454433 3441 1279999999999999999
Q ss_pred CCCCCccccccccCCHHHHHHHHHHHHHhhhccCCCCCCHhhhcccCeEEEECCChHHHHHHHHHHHHHHHHHHhhhcCC
Q 018704 185 FGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHV 264 (351)
Q Consensus 185 p~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~v~VvGgG~~a~e~a~~l~~~~~~~~~~~~~~~ 264 (351)
|++||.+... +.+..+... +.. ..++++|||||.+|+|+|..+.+++
T Consensus 153 p~i~G~~~~~--~~~~~~~~~----------~~~----------~~~~vvViGgG~~g~E~A~~l~~~g----------- 199 (467)
T 1zk7_A 153 PPIPGLKESP--YWTSTEALA----------SDT----------IPERLAVIGSSVVALELAQAFARLG----------- 199 (467)
T ss_dssp CCCTTTTTSC--CBCHHHHHH----------CSS----------CCSEEEEECCSHHHHHHHHHHHHTT-----------
T ss_pred CCCCCCCcCc--eecHHHHhc----------ccc----------cCCEEEEECCCHHHHHHHHHHHHcC-----------
Confidence 9999975321 122222221 112 2359999999999999999999887
Q ss_pred CCccEEEEEeCC-CCCCCCcHHHHHHHHHHhhhcCcEEEcCe-EEEEeC--C--eEEecCCcEEeccEEEEecCCCCc-c
Q 018704 265 KDYIHVTLIEAN-EILSSFDDRLRHYATTQLSKSGVRLVRGI-VKDVDS--Q--KLILNDGTEVPYGLLVWSTGVGPS-T 337 (351)
Q Consensus 265 ~~~~~v~~~~~~-~~l~~~~~~~~~~~~~~l~~~gV~~~~~~-v~~v~~--~--~v~~~~g~~~~~D~vi~a~G~~p~-~ 337 (351)
.+|+++++. .+++ +++++.+.+.+.+++.||+++.+. |++++. + .+.+. +.++++|.||+|+|++|+ +
T Consensus 200 ---~~Vtlv~~~~~~l~-~~~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~~~v~~~-~~~i~aD~Vv~a~G~~p~~~ 274 (467)
T 1zk7_A 200 ---SKVTVLARNTLFFR-EDPAIGEAVTAAFRAEGIEVLEHTQASQVAHMDGEFVLTTT-HGELRADKLLVATGRTPNTR 274 (467)
T ss_dssp ---CEEEEECSSCTTTT-SCHHHHHHHHHHHHHTTCEEETTCCEEEEEEETTEEEEEET-TEEEEESEEEECSCEEESCT
T ss_pred ---CEEEEEEECCccCC-CCHHHHHHHHHHHHhCCCEEEcCCEEEEEEEeCCEEEEEEC-CcEEEcCEEEECCCCCcCCC
Confidence 899999997 4677 899999999999999999999994 888864 2 24454 568999999999999999 5
Q ss_pred c--cccCCCCCCCCC
Q 018704 338 L--VKSLDLPKSPGG 350 (351)
Q Consensus 338 ~--~~~~gl~~~~~G 350 (351)
+ ++.+|++++++|
T Consensus 275 ~l~l~~~gl~~~~~G 289 (467)
T 1zk7_A 275 SLALDAAGVTVNAQG 289 (467)
T ss_dssp TSCGGGGTCCBCTTS
T ss_pred cCCchhcCCcCCCCC
Confidence 3 567788887666
No 42
>3dk9_A Grase, GR, glutathione reductase; flavoenzyme, nicotinamide, acetylation, alternative initiation, cytoplasm, FAD, flavoprotein, mitochondrion, NADP; HET: SO4 FAD; 0.95A {Homo sapiens} PDB: 1bwc_A* 1gra_A* 1gre_A* 1grf_A* 1grh_A* 1grb_A* 2gh5_A* 1gsn_A* 3dk4_A* 3dk8_A* 3djj_A* 3grs_A* 3sqp_A* 4gr1_A* 2aaq_A* 1dnc_A* 1grg_A* 1grt_A* 1xan_A* 5grt_A* ...
Probab=99.96 E-value=1.3e-28 Score=236.33 Aligned_cols=239 Identities=21% Similarity=0.242 Sum_probs=170.5
Q ss_pred CCCcEEEECCchhHHHHHHhhhccCceEEEEcCCCccccchhh----h-----------hhh-----cccc------ccc
Q 018704 61 EKPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRNHMVFTPLL----A-----------STC-----VGTL------EFR 114 (351)
Q Consensus 61 ~~~~VvIIG~G~aGl~aA~~L~~~g~~v~vie~~~~~~~~~~~----~-----------~~~-----~~~~------~~~ 114 (351)
.++||+|||||++||++|+.|++.|++|+|||++... ..... + ... .+.. .+.
T Consensus 19 ~~~dVvIIGgG~aGl~aA~~la~~G~~V~liE~~~~G-G~~~~~gc~p~k~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 97 (478)
T 3dk9_A 19 ASYDYLVIGGGSGGLASARRAAELGARAAVVESHKLG-GTCVNVGCVPKKVMWNTAVHSEFMHDHADYGFPSCEGKFNWR 97 (478)
T ss_dssp EECSEEEECCSHHHHHHHHHHHHTTCCEEEEESSCTT-HHHHHHSHHHHHHHHHHHHHHHHHTTTTTTTSCCCCCCCCHH
T ss_pred CCCCEEEECCCHHHHHHHHHHHhCCCeEEEEecCCCC-CcccccCccchHHHHHHHHHHHHHHHHHhcCccCCCCccCHH
Confidence 4589999999999999999999999999999976421 10000 0 000 0000 000
Q ss_pred ccc-------cchhccchhhhcCCCeEEEEEEeeeEeCCCCEEEEEeecCccccCCCceeEeeccEEEEecCCCcCCC--
Q 018704 115 SVA-------EPIARIQPAISREPGSYFFLSHCAGIDTDNHVVHCETVTDELRTLEPWKFKISYDKLVIALGAEASTF-- 185 (351)
Q Consensus 115 ~~~-------~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~v~~~~~~~~~~~~~~~~~~~~~d~lviAtG~~p~~p-- 185 (351)
.+. ..+...........++.++...+..++.....+.. ++. ++.||+||||||+.|..|
T Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~g~~~~~~~~~~~v~~----~g~--------~~~~d~lviAtG~~p~~p~~ 165 (478)
T 3dk9_A 98 VIKEKRDAYVSRLNAIYQNNLTKSHIEIIRGHAAFTSDPKPTIEV----SGK--------KYTAPHILIATGGMPSTPHE 165 (478)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTTCEEEESCEEECSCSSCEEEE----TTE--------EEECSCEEECCCEEECCCCT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCcEEEEeEEEEeeCCeEEEEE----CCE--------EEEeeEEEEccCCCCCCCCc
Confidence 000 00111112223345788888877777766555542 444 899999999999999999
Q ss_pred -CCCCccccccccCCHHHHHHHHHHHHHhhhccCCCCCCHhhhcccCeEEEECCChHHHHHHHHHHHHHHHHHHhhhcCC
Q 018704 186 -GIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHV 264 (351)
Q Consensus 186 -~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~v~VvGgG~~a~e~a~~l~~~~~~~~~~~~~~~ 264 (351)
++||.+ .+.+ ..+. +.+...| ++++|||||++|+|+|..|.+++
T Consensus 166 ~~i~G~~-~~~~---~~~~----------~~~~~~~----------~~vvViGgG~~g~E~A~~l~~~g----------- 210 (478)
T 3dk9_A 166 SQIPGAS-LGIT---SDGF----------FQLEELP----------GRSVIVGAGYIAVEMAGILSALG----------- 210 (478)
T ss_dssp TTSTTGG-GSBC---HHHH----------TTCCSCC----------SEEEEECCSHHHHHHHHHHHHTT-----------
T ss_pred CCCCCCc-eeEc---hHHh----------hchhhcC----------ccEEEECCCHHHHHHHHHHHHcC-----------
Confidence 899974 2222 2211 2223333 59999999999999999999887
Q ss_pred CCccEEEEEeCC-CCCCCCcHHHHHHHHHHhhhcCcEEEcCe-EEEEeC--Ce----EEecC---C----cEEeccEEEE
Q 018704 265 KDYIHVTLIEAN-EILSSFDDRLRHYATTQLSKSGVRLVRGI-VKDVDS--QK----LILND---G----TEVPYGLLVW 329 (351)
Q Consensus 265 ~~~~~v~~~~~~-~~l~~~~~~~~~~~~~~l~~~gV~~~~~~-v~~v~~--~~----v~~~~---g----~~~~~D~vi~ 329 (351)
.+|+++++. .+++.+++++.+.+.+.+++.||+++.+. |++++. ++ +.+.+ | .++++|.||+
T Consensus 211 ---~~Vtlv~~~~~~l~~~d~~~~~~~~~~l~~~gv~i~~~~~v~~i~~~~~~~~~~v~~~~~~~g~~~g~~~~~D~vi~ 287 (478)
T 3dk9_A 211 ---SKTSLMIRHDKVLRSFDSMISTNCTEELENAGVEVLKFSQVKEVKKTLSGLEVSMVTAVPGRLPVMTMIPDVDCLLW 287 (478)
T ss_dssp ---CEEEEECSSSSSCTTSCHHHHHHHHHHHHHTTCEEETTEEEEEEEECSSSEEEEEEECCTTSCCEEEEEEEESEEEE
T ss_pred ---CeEEEEEeCCccccccCHHHHHHHHHHHHHCCCEEEeCCEEEEEEEcCCCcEEEEEEccCCCCcccceEEEcCEEEE
Confidence 899999996 57889999999999999999999999995 888864 23 45554 2 5789999999
Q ss_pred ecCCCCc-c-c-cccCCCCCCCCC
Q 018704 330 STGVGPS-T-L-VKSLDLPKSPGG 350 (351)
Q Consensus 330 a~G~~p~-~-~-~~~~gl~~~~~G 350 (351)
|+|++|+ + + ++.+|++++++|
T Consensus 288 a~G~~p~~~~l~l~~~g~~~~~~G 311 (478)
T 3dk9_A 288 AIGRVPNTKDLSLNKLGIQTDDKG 311 (478)
T ss_dssp CSCEEESCTTSCGGGGTCCBCTTC
T ss_pred eeccccCCCCCCchhcCCeeCCCC
Confidence 9999999 4 4 678888887776
No 43
>3h28_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3h27_A* 3h29_A* 3hyv_A* 3hyw_A* 3hyx_A*
Probab=99.96 E-value=6e-28 Score=228.62 Aligned_cols=251 Identities=24% Similarity=0.316 Sum_probs=186.0
Q ss_pred CCcEEEECCchhHHHHHHhhhc--cCceEEEEcCCCccccchhhhhhhcccccccccccchhccchhhhcCCCeEEEEEE
Q 018704 62 KPRVVVLGSGWAGCRLMKGIDT--SLYDVVCVSPRNHMVFTPLLASTCVGTLEFRSVAEPIARIQPAISREPGSYFFLSH 139 (351)
Q Consensus 62 ~~~VvIIG~G~aGl~aA~~L~~--~g~~v~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 139 (351)
++||||||||++|+++|..|++ .|++|+|||+++.+.|.+.+.....+......+...+... ....++.++..+
T Consensus 2 ~~~vvIIGgG~aGl~aA~~L~~~~~g~~Vtlie~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~----~~~~gv~~~~~~ 77 (430)
T 3h28_A 2 AKHVVVIGGGVGGIATAYNLRNLMPDLKITLISDRPYFGFTPAFPHLAMGWRKFEDISVPLAPL----LPKFNIEFINEK 77 (430)
T ss_dssp CCEEEEECSSHHHHHHHHHHHHHCTTCEEEEECSSSEEECGGGHHHHHHTCSCGGGSEEESTTT----GGGGTEEEECSC
T ss_pred CCCEEEECccHHHHHHHHHHHcCCCCCeEEEECCCCCCCcCCCcchhccCccCHHHHHHHHHHH----HHhcCCEEEEEE
Confidence 3699999999999999999999 7899999999999988887776665655554444444333 333578888889
Q ss_pred eeeEeCCCCEEEEEeecCccccCCCceeEeeccEEEEecCCCcCCCCCCCccccccccCCHHHHHHHHHHHHHhhhccCC
Q 018704 140 CAGIDTDNHVVHCETVTDELRTLEPWKFKISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDV 219 (351)
Q Consensus 140 v~~i~~~~~~v~~~~~~~~~~~~~~~~~~~~~d~lviAtG~~p~~p~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 219 (351)
|+.++.+.+.+.+ .++. ++.||+||+|||+.|.+|.+.. ..+...+.+..++..+.+.+...
T Consensus 78 v~~id~~~~~v~~---~~g~--------~i~~d~liiAtG~~~~~pg~~~-~g~~~~~~~~~~a~~~~~~~~~~------ 139 (430)
T 3h28_A 78 AESIDPDANTVTT---QSGK--------KIEYDYLVIATGPKLVFGAEGQ-EENSTSICTAEHALETQKKLQEL------ 139 (430)
T ss_dssp EEEEETTTTEEEE---TTCC--------EEECSEEEECCCCEEECCSBTH-HHHSCCCSSHHHHHHHHHHHHHH------
T ss_pred EEEEECCCCEEEE---CCCc--------EEECCEEEEcCCcccccCCCCC-cCCccCcCCHHHHHHHHHHHHHH------
Confidence 9999999887765 3555 7999999999999987763321 13445567777887777655321
Q ss_pred CCCCHhhhcccCeEEEECCChHH------HHHHHHHHHHHHHHHHhhhcCCCCccEEEEEeCCCCC-----CCCcHHHHH
Q 018704 220 PGISEEEKSRLLHCVVVGGGPTG------VEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEIL-----SSFDDRLRH 288 (351)
Q Consensus 220 p~~~~~~~~~~~~v~VvGgG~~a------~e~a~~l~~~~~~~~~~~~~~~~~~~~v~~~~~~~~l-----~~~~~~~~~ 288 (351)
...++++|||+|+++ +|+|..++.... +. ..+...+|+++++.+.+ +.+ +.+.+
T Consensus 140 --------~~~~~~vVVGgG~~~~~~G~~~E~a~~la~~l~----~~--g~~~~~~V~~v~~~~~~~~~~l~~~-~~~~~ 204 (430)
T 3h28_A 140 --------YANPGPVVIGAIPGVSCFGPAYEFALMLHYELK----KR--GIRYKVPMTFITSEPYLGHFGVGGI-GASKR 204 (430)
T ss_dssp --------HHSCCCEEEEECTTCCCCHHHHHHHHHHHHHHH----HT--TCGGGCCEEEECSSSSTTCTTTTCS-TTHHH
T ss_pred --------HhcCCeEEEEcCCCCCcCcHHHHHHHHHHHHHH----Hc--CCccceEEEEecCCccccccccCcc-hHHHH
Confidence 112367899998765 888877764321 11 11234689999987533 222 34778
Q ss_pred HHHHHhhhcCcEEEcCe-EEEEeCCeEEecC----CcEEeccEEEEecCCCCccccccC--CCCCCCCC
Q 018704 289 YATTQLSKSGVRLVRGI-VKDVDSQKLILND----GTEVPYGLLVWSTGVGPSTLVKSL--DLPKSPGG 350 (351)
Q Consensus 289 ~~~~~l~~~gV~~~~~~-v~~v~~~~v~~~~----g~~~~~D~vi~a~G~~p~~~~~~~--gl~~~~~G 350 (351)
.+.+.+++.||+++++. |++++.+++++++ |+++++|.|++++|++|++++..+ |+ .+++|
T Consensus 205 ~l~~~l~~~GV~i~~~~~v~~v~~~~v~~~~~~~~g~~i~~D~vv~a~G~~~~~~l~~~~~gl-~~~~G 272 (430)
T 3h28_A 205 LVEDLFAERNIDWIANVAVKAIEPDKVIYEDLNGNTHEVPAKFTMFMPSFQGPEVVASAGDKV-ANPAN 272 (430)
T ss_dssp HHHHHHHHTTCEEECSCEEEEECSSEEEEECTTSCEEEEECSEEEEECEEECCHHHHTTCTTT-BCTTT
T ss_pred HHHHHHHHCCCEEEeCCEEEEEeCCeEEEEecCCCceEEeeeEEEECCCCccchhHhhccccC-cCCCC
Confidence 88899999999999995 9999999998887 788999999999999998766664 66 45555
No 44
>4fk1_A Putative thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE FAD; 2.40A {Bacillus anthracis} PDB: 4fk1_C*
Probab=99.96 E-value=8.9e-29 Score=223.66 Aligned_cols=239 Identities=10% Similarity=0.107 Sum_probs=158.5
Q ss_pred CCCCcEEEECCchhHHHHHHhhhccCceEEEEcCCCccccchhhhhhhccccccc--ccccchhccchhhhcCCCeEEEE
Q 018704 60 NEKPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRNHMVFTPLLASTCVGTLEFR--SVAEPIARIQPAISREPGSYFFL 137 (351)
Q Consensus 60 ~~~~~VvIIG~G~aGl~aA~~L~~~g~~v~vie~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~ 137 (351)
++++||+|||||||||+||++|+|.|++|+|||++..... +.....+.+... ...........++.++..+.+..
T Consensus 4 M~~yDVvIIGaGpAGlsAA~~lar~g~~v~lie~~~~gg~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (304)
T 4fk1_A 4 MKYIDCAVIGAGPAGLNASLVLGRARKQIALFDNNTNRNR---VTQNSHGFITRDGIKPEEFKEIGLNEVMKYPSVHYYE 80 (304)
T ss_dssp --CEEEEEECCSHHHHHHHHHHHHTTCCEEEEECSCCGGG---GSSCBCCSTTCTTBCHHHHHHHHHHHHTTSTTEEEEE
T ss_pred CCCcCEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCCCCe---eeeecCCccCCCCCCHHHHHHHHHHHHHhcCCEEEEe
Confidence 3468999999999999999999999999999998653211 000000111111 01111122233345556677777
Q ss_pred EEeeeEeCC-CCEEEEEeecCccccCCCceeEeeccEEEEecCCCcCCCCCCCccccccccCCHHHHHHHHHHHHHhhhc
Q 018704 138 SHCAGIDTD-NHVVHCETVTDELRTLEPWKFKISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLML 216 (351)
Q Consensus 138 ~~v~~i~~~-~~~v~~~~~~~~~~~~~~~~~~~~~d~lviAtG~~p~~p~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 216 (351)
..+..++.. ...+.+.. .++. ++.||+||||||+.|+.|++||.+... ...+.........
T Consensus 81 ~~~~~~~~~~~~~~~v~~-~~g~--------~~~a~~liiATGs~p~~p~i~G~~~~~--~~~v~~~~~~~~~------- 142 (304)
T 4fk1_A 81 KTVVMITKQSTGLFEIVT-KDHT--------KYLAERVLLATGMQEEFPSIPNVREYY--GKSLFSCPYCDGW------- 142 (304)
T ss_dssp CCEEEEEECTTSCEEEEE-TTCC--------EEEEEEEEECCCCEEECCSCTTHHHHB--TTTEESCHHHHSG-------
T ss_pred eEEEEeeecCCCcEEEEE-CCCC--------EEEeCEEEEccCCccccccccCccccc--cceeeeccccchh-------
Confidence 777766543 33444433 4565 899999999999999999999975311 1111111111111
Q ss_pred cCCCCCCHhhhcccCeEEEECCChH-HHHHHHHHHHHHHHHHHhhhcCCCCccEEEEEeCCCCCCCCcHHHHHHHHHHhh
Q 018704 217 SDVPGISEEEKSRLLHCVVVGGGPT-GVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEILSSFDDRLRHYATTQLS 295 (351)
Q Consensus 217 ~~~p~~~~~~~~~~~~v~VvGgG~~-a~e~a~~l~~~~~~~~~~~~~~~~~~~~v~~~~~~~~l~~~~~~~~~~~~~~l~ 295 (351)
..+.++++|||||.. ++++|..+.+++ .+|+++.++..+ .+.+.+.++
T Consensus 143 ----------~~~~~~~~VIggG~~~~~e~a~~~~~~~--------------~~v~i~~~~~~~-------~~~~~~~l~ 191 (304)
T 4fk1_A 143 ----------ELKDQPLIIISENEDHTLHMTKLVYNWS--------------TDLVIATNGNEL-------SQTIMDELS 191 (304)
T ss_dssp ----------GGTTSCEEEECCSHHHHHHHHHHHTTTC--------------SCEEEECSSCCC-------CHHHHHHHH
T ss_pred ----------HhcCCceeeecCCCchhhhHHHHHHhCC--------------ceEEEEeccccc-------hhhhhhhhh
Confidence 023357888888875 567777776655 889999886533 234556788
Q ss_pred hcCcEEEcCeEEEEeC-----CeEEecCCcEEeccEEEEecCCCCc-cccccCCCCCCCCC
Q 018704 296 KSGVRLVRGIVKDVDS-----QKLILNDGTEVPYGLLVWSTGVGPS-TLVKSLDLPKSPGG 350 (351)
Q Consensus 296 ~~gV~~~~~~v~~v~~-----~~v~~~~g~~~~~D~vi~a~G~~p~-~~~~~~gl~~~~~G 350 (351)
+.|++++.+.++.+.. ..+.+++|+++++|.+|+++|.+|+ ++++++|+++|++|
T Consensus 192 ~~g~~~~~~~v~~~~~~~~~~~~v~~~~g~~i~~~~~vi~~g~~~~~~~~~~~g~~~~~~G 252 (304)
T 4fk1_A 192 NKNIPVITESIRTLQGEGGYLKKVEFHSGLRIERAGGFIVPTFFRPNQFIEQLGCELQSNG 252 (304)
T ss_dssp TTTCCEECSCEEEEESGGGCCCEEEETTSCEECCCEEEECCEEECSSCHHHHTTCCCCTTS
T ss_pred ccceeEeeeeEEEeecCCCeeeeeeccccceeeecceeeeeccccCChhhhhcCeEECCCC
Confidence 8999999988777765 3688999999999988888776665 88999999998887
No 45
>2qae_A Lipoamide, dihydrolipoyl dehydrogenase; FAD-cystine-oxidoreductase, homodimer; HET: FAD; 1.90A {Trypanosoma cruzi}
Probab=99.96 E-value=1.9e-28 Score=234.50 Aligned_cols=243 Identities=19% Similarity=0.224 Sum_probs=169.5
Q ss_pred CCcEEEECCchhHHHHHHhhhccCceEEEEcCCCccccchh----hhh-----------------hhccccc----cccc
Q 018704 62 KPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRNHMVFTPL----LAS-----------------TCVGTLE----FRSV 116 (351)
Q Consensus 62 ~~~VvIIG~G~aGl~aA~~L~~~g~~v~vie~~~~~~~~~~----~~~-----------------~~~~~~~----~~~~ 116 (351)
++||+|||||++|+++|..|++.|++|+|||+++.+..... .+. ...+... ..++
T Consensus 2 ~~dvvIIGgG~aGl~aA~~l~~~g~~V~lie~~~~~GG~~~~~g~~psk~l~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 81 (468)
T 2qae_A 2 PYDVVVIGGGPGGYVASIKAAQLGMKTACVEKRGALGGTCLNVGCIPSKALLHATHLYHDAHANFARYGLMGGEGVTMDS 81 (468)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSSSHHHHHHSHHHHHHHHHHHHHHHHHHHTHHHHTEECGGGCEECH
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCCcCCcCCCcCcHhHHHHHHHHHHHHHHHHHHHhcCcccCCCCccCH
Confidence 47999999999999999999999999999999865422100 000 0001100 0001
Q ss_pred ccc----------hhccchhhhcCCCeEEEEEEeeeEeCCCCEEEEEeecCccccCCCceeEeeccEEEEecCCCcCCCC
Q 018704 117 AEP----------IARIQPAISREPGSYFFLSHCAGIDTDNHVVHCETVTDELRTLEPWKFKISYDKLVIALGAEASTFG 186 (351)
Q Consensus 117 ~~~----------~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~v~~~~~~~~~~~~~~~~~~~~~d~lviAtG~~p~~p~ 186 (351)
... +......+....++.++...+..++. +.+.+.. .++. ...+.||+||+|||+.|..|+
T Consensus 82 ~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~g~~~~i~~--~~~~v~~-~~G~------~~~~~~d~lviAtG~~p~~p~ 152 (468)
T 2qae_A 82 AKMQQQKERAVKGLTGGVEYLFKKNKVTYYKGEGSFETA--HSIRVNG-LDGK------QEMLETKKTIIATGSEPTELP 152 (468)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEEEEEEET--TEEEEEE-TTSC------EEEEEEEEEEECCCEEECCBT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEEEEEEeeC--CEEEEEe-cCCc------eEEEEcCEEEECCCCCcCCCC
Confidence 000 00001122233467787777766664 4555543 3441 128999999999999999998
Q ss_pred CCCccc-cccccCCHHHHHHHHHHHHHhhhccCCCCCCHhhhcccCeEEEECCChHHHHHHHHHHHHHHHHHHhhhcCCC
Q 018704 187 IHGVKE-NATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVK 265 (351)
Q Consensus 187 i~g~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~v~VvGgG~~a~e~a~~l~~~~~~~~~~~~~~~~ 265 (351)
++|.+. .++ +..++.. +... .++++|||||.+|+|+|..|.+++
T Consensus 153 ~~g~~~~~v~---t~~~~~~----------~~~~----------~~~vvViGgG~~g~E~A~~l~~~g------------ 197 (468)
T 2qae_A 153 FLPFDEKVVL---SSTGALA----------LPRV----------PKTMVVIGGGVIGLELGSVWARLG------------ 197 (468)
T ss_dssp TBCCCSSSEE---CHHHHHT----------CSSC----------CSEEEEECCSHHHHHHHHHHHHTT------------
T ss_pred CCCCCcCcee---chHHHhh----------cccC----------CceEEEECCCHHHHHHHHHHHHhC------------
Confidence 888753 222 2322221 1122 359999999999999999999887
Q ss_pred CccEEEEEeCC-CCCCCCcHHHHHHHHHHh-hhcCcEEEcC-eEEEEeCC----eEEec--CC--cEEeccEEEEecCCC
Q 018704 266 DYIHVTLIEAN-EILSSFDDRLRHYATTQL-SKSGVRLVRG-IVKDVDSQ----KLILN--DG--TEVPYGLLVWSTGVG 334 (351)
Q Consensus 266 ~~~~v~~~~~~-~~l~~~~~~~~~~~~~~l-~~~gV~~~~~-~v~~v~~~----~v~~~--~g--~~~~~D~vi~a~G~~ 334 (351)
.+|+++++. .+++.+++++.+.+.+.+ ++.||+++.+ +|++++.+ .+.+. +| +++++|.||+|+|++
T Consensus 198 --~~Vtlv~~~~~~l~~~d~~~~~~l~~~l~~~~gv~i~~~~~v~~i~~~~~~~~v~~~~~~g~~~~i~~D~vv~a~G~~ 275 (468)
T 2qae_A 198 --AEVTVVEFAPRCAPTLDEDVTNALVGALAKNEKMKFMTSTKVVGGTNNGDSVSLEVEGKNGKRETVTCEALLVSVGRR 275 (468)
T ss_dssp --CEEEEECSSSSSSTTSCHHHHHHHHHHHHHHTCCEEECSCEEEEEEECSSSEEEEEECC---EEEEEESEEEECSCEE
T ss_pred --CEEEEEecCCcccccCCHHHHHHHHHHHhhcCCcEEEeCCEEEEEEEcCCeEEEEEEcCCCceEEEECCEEEECCCcc
Confidence 899999997 578889999999999999 9999999999 49988753 24554 67 679999999999999
Q ss_pred Cc-cc--cccCCCCCCCCC
Q 018704 335 PS-TL--VKSLDLPKSPGG 350 (351)
Q Consensus 335 p~-~~--~~~~gl~~~~~G 350 (351)
|+ ++ ++.+|++++++|
T Consensus 276 p~~~~l~l~~~gl~~~~~G 294 (468)
T 2qae_A 276 PFTGGLGLDKINVAKNERG 294 (468)
T ss_dssp ECCTTSCHHHHTCCBCTTS
T ss_pred cCCCCCCchhcCCccCCCC
Confidence 99 66 677788877665
No 46
>1trb_A Thioredoxin reductase; oxidoreductase(flavoenzyme); HET: FAD; 2.00A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 PDB: 1cl0_A* 1f6m_A* 1tdf_A* 1tde_A*
Probab=99.96 E-value=1.2e-28 Score=224.03 Aligned_cols=239 Identities=17% Similarity=0.167 Sum_probs=163.7
Q ss_pred CCcEEEECCchhHHHHHHhhhccCceEEEEcCCCccccchhhhhhhcccccccc--cccchhccchhhhcCCCeEEEEEE
Q 018704 62 KPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRNHMVFTPLLASTCVGTLEFRS--VAEPIARIQPAISREPGSYFFLSH 139 (351)
Q Consensus 62 ~~~VvIIG~G~aGl~aA~~L~~~g~~v~vie~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~ 139 (351)
.+||+|||||++|+++|..|++.|++|+|||+..... ...........+.+.. ....+...........++.++...
T Consensus 5 ~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~gg-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (320)
T 1trb_A 5 HSKLLILGSGPAGYTAAVYAARANLQPVLITGMEKGG-QLTTTTEVENWPGDPNDLTGPLLMERMHEHATKFETEIIFDH 83 (320)
T ss_dssp EEEEEEECCSHHHHHHHHHHHTTTCCCEEECCSSTTG-GGGGCSBCCCSTTCCSSCBHHHHHHHHHHHHHHTTCEEECCC
T ss_pred cCCEEEECcCHHHHHHHHHHHHCCCcEEEEccCCCCc-eEecchhhhhCCCCCCCCCHHHHHHHHHHHHHHCCCEEEEee
Confidence 4799999999999999999999999999999642111 0000000000111100 011122222223334467777778
Q ss_pred eeeEeCCCCEEEEEeecCccccCCCceeEeeccEEEEecCCCcCCCCCCCccccc-cccCCHHHHHHHHHHHHHhhhccC
Q 018704 140 CAGIDTDNHVVHCETVTDELRTLEPWKFKISYDKLVIALGAEASTFGIHGVKENA-TFLREVHHAQEIRRKLLLNLMLSD 218 (351)
Q Consensus 140 v~~i~~~~~~v~~~~~~~~~~~~~~~~~~~~~d~lviAtG~~p~~p~i~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 218 (351)
++.++.+.+.+.+ . .++. .+.||+||+|||+.|..|++||.+... ........ ....+
T Consensus 84 v~~i~~~~~~~~v-~-~~~~--------~~~~~~lv~AtG~~~~~~~~~g~~~~~~~~~~~~~~---~~~~~-------- 142 (320)
T 1trb_A 84 INKVDLQNRPFRL-N-GDNG--------EYTCDALIIATGASARYLGLPSEEAFKGRGVSACAT---SDGFF-------- 142 (320)
T ss_dssp EEEEECSSSSEEE-E-ESSC--------EEEEEEEEECCCEEECCCCCHHHHHTBTTTEESCHH---HHGGG--------
T ss_pred eeEEEecCCEEEE-E-eCCC--------EEEcCEEEECCCCCcCCCCCCChHHhCCceeEeccc---CCccc--------
Confidence 9999988777765 2 3555 899999999999999999888864210 01111111 11110
Q ss_pred CCCCCHhhhcccCeEEEECCChHHHHHHHHHHHHHHHHHHhhhcCCCCccEEEEEeCCCCCCCCcHHHHHHHHHHhhhcC
Q 018704 219 VPGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEILSSFDDRLRHYATTQLSKSG 298 (351)
Q Consensus 219 ~p~~~~~~~~~~~~v~VvGgG~~a~e~a~~l~~~~~~~~~~~~~~~~~~~~v~~~~~~~~l~~~~~~~~~~~~~~l~~~g 298 (351)
...++++|||+|.+|+|+|..|.+++ .+|+++++...+. .++.+.+.+.+.+++.|
T Consensus 143 ---------~~~~~v~ViG~G~~g~e~A~~l~~~g--------------~~Vtlv~~~~~~~-~~~~~~~~l~~~l~~~g 198 (320)
T 1trb_A 143 ---------YRNQKVAVIGGGNTAVEEALYLSNIA--------------SEVHLIHRRDGFR-AEKILIKRLMDKVENGN 198 (320)
T ss_dssp ---------GTTSEEEEECSSHHHHHHHHHHTTTS--------------SEEEEECSSSSCC-CCHHHHHHHHHHHHTSS
T ss_pred ---------cCCCeEEEECCCHHHHHHHHHHHhcC--------------CeEEEEEeCCccc-cCHHHHHHHHHhcccCC
Confidence 23469999999999999999998776 8999999975432 35677778888899999
Q ss_pred cEEEcC-eEEEEeCCe-----EEecC----C--cEEeccEEEEecCCCCc-cccccCCCCCC
Q 018704 299 VRLVRG-IVKDVDSQK-----LILND----G--TEVPYGLLVWSTGVGPS-TLVKSLDLPKS 347 (351)
Q Consensus 299 V~~~~~-~v~~v~~~~-----v~~~~----g--~~~~~D~vi~a~G~~p~-~~~~~~gl~~~ 347 (351)
|+++.+ +|+++..+. |.+.+ | .++++|.||+|+|++|+ ++++ .+++++
T Consensus 199 v~i~~~~~v~~i~~~~~~v~~v~~~~~~~~g~~~~i~~D~vv~a~G~~p~~~~~~-~~l~~~ 259 (320)
T 1trb_A 199 IILHTNRTLEEVTGDQMGVTGVRLRDTQNSDNIESLDVAGLFVAIGHSPNTAIFE-GQLELE 259 (320)
T ss_dssp EEEECSCEEEEEEECSSSEEEEEEECCTTCCCCEEEECSEEEECSCEEESCGGGT-TTSCEE
T ss_pred eEEEcCceeEEEEcCCCceEEEEEEeccCCCceEEEEcCEEEEEeCCCCChHHhc-cccccc
Confidence 999999 499987543 77764 4 47999999999999999 6766 355544
No 47
>1ebd_A E3BD, dihydrolipoamide dehydrogenase; redox-active center, glycolysis, oxidoreductase; HET: FAD; 2.60A {Geobacillus stearothermophilus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=99.96 E-value=2.4e-28 Score=233.00 Aligned_cols=240 Identities=18% Similarity=0.246 Sum_probs=169.0
Q ss_pred CCcEEEECCchhHHHHHHhhhccCceEEEEcCCCccccch----hhhh-----------hh-----ccccc-c--ccccc
Q 018704 62 KPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRNHMVFTP----LLAS-----------TC-----VGTLE-F--RSVAE 118 (351)
Q Consensus 62 ~~~VvIIG~G~aGl~aA~~L~~~g~~v~vie~~~~~~~~~----~~~~-----------~~-----~~~~~-~--~~~~~ 118 (351)
++||+|||||++|+++|..|++.|++|+|||++ .+.... ..+. .. .+... . .++..
T Consensus 3 ~~dvvIIGgG~aGl~aA~~l~~~g~~V~lie~~-~~gG~~~~~g~~p~k~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 81 (455)
T 1ebd_A 3 ETETLVVGAGPGGYVAAIRAAQLGQKVTIVEKG-NLGGVCLNVGCIPSKALISASHRYEQAKHSEEMGIKAENVTIDFAK 81 (455)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHTTCCEEEEESS-CTTHHHHHTSHHHHHHHHHHHHHHHHHHTCGGGTEECCSCEECHHH
T ss_pred cCCEEEECCCHHHHHHHHHHHhCCCeEEEEECC-CCCCcCcCcCchhhHHHHHHHHHHHHHHHHHhcCcccCCCccCHHH
Confidence 479999999999999999999999999999997 321100 0000 00 00000 0 00000
Q ss_pred c----------hhccchhhhcCCCeEEEEEEeeeEeCCCCEEEEEeecCc-cccCCCceeEeeccEEEEecCCCcCCCCC
Q 018704 119 P----------IARIQPAISREPGSYFFLSHCAGIDTDNHVVHCETVTDE-LRTLEPWKFKISYDKLVIALGAEASTFGI 187 (351)
Q Consensus 119 ~----------~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~v~~~~~~~~-~~~~~~~~~~~~~d~lviAtG~~p~~p~i 187 (351)
. +...........++.++...+..++. +.+.+.. .++ . ++.||+||+|||+.|..|++
T Consensus 82 ~~~~~~~~~~~l~~~~~~~~~~~gv~~~~g~~~~id~--~~v~V~~-~~G~~--------~i~~d~lViATGs~p~~~~~ 150 (455)
T 1ebd_A 82 VQEWKASVVKKLTGGVEGLLKGNKVEIVKGEAYFVDA--NTVRVVN-GDSAQ--------TYTFKNAIIATGSRPIELPN 150 (455)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTTCEEEESEEEEEET--TEEEEEE-TTEEE--------EEECSEEEECCCEEECCBTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCCEEEEEEEEEccC--CeEEEEe-CCCcE--------EEEeCEEEEecCCCCCCCCC
Confidence 0 11111223345578888777666654 4555543 233 3 79999999999999999988
Q ss_pred CCccccccccCCHHHHHHHHHHHHHhhhccCCCCCCHhhhcccCeEEEECCChHHHHHHHHHHHHHHHHHHhhhcCCCCc
Q 018704 188 HGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDY 267 (351)
Q Consensus 188 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~v~VvGgG~~a~e~a~~l~~~~~~~~~~~~~~~~~~ 267 (351)
+|.+..+ .+..+... +.. ..++++|||||.+|+|+|..|.+++
T Consensus 151 ~g~~~~v---~~~~~~~~----------~~~----------~~~~vvViGgG~~g~e~A~~l~~~g-------------- 193 (455)
T 1ebd_A 151 FKFSNRI---LDSTGALN----------LGE----------VPKSLVVIGGGYIGIELGTAYANFG-------------- 193 (455)
T ss_dssp BCCCSSE---ECHHHHHT----------CSS----------CCSEEEEECCSHHHHHHHHHHHHTT--------------
T ss_pred CCccceE---ecHHHHhc----------ccc----------CCCeEEEECCCHHHHHHHHHHHHcC--------------
Confidence 8875432 22322211 112 2359999999999999999999887
Q ss_pred cEEEEEeCC-CCCCCCcHHHHHHHHHHhhhcCcEEEcCe-EEEEeC--CeE--Eec---CCcEEeccEEEEecCCCCc-c
Q 018704 268 IHVTLIEAN-EILSSFDDRLRHYATTQLSKSGVRLVRGI-VKDVDS--QKL--ILN---DGTEVPYGLLVWSTGVGPS-T 337 (351)
Q Consensus 268 ~~v~~~~~~-~~l~~~~~~~~~~~~~~l~~~gV~~~~~~-v~~v~~--~~v--~~~---~g~~~~~D~vi~a~G~~p~-~ 337 (351)
.+|+++++. .+++.+++++.+.+.+.+++.||+++.+. |++++. +++ .+. +++++++|.||+|+|++|+ +
T Consensus 194 ~~Vtlv~~~~~~l~~~~~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~~~~~v~~~~~g~~~~~~~D~vv~a~G~~p~~~ 273 (455)
T 1ebd_A 194 TKVTILEGAGEILSGFEKQMAAIIKKRLKKKGVEVVTNALAKGAEEREDGVTVTYEANGETKTIDADYVLVTVGRRPNTD 273 (455)
T ss_dssp CEEEEEESSSSSSTTSCHHHHHHHHHHHHHTTCEEEESEEEEEEEEETTEEEEEEEETTEEEEEEESEEEECSCEEESCS
T ss_pred CcEEEEEcCCccccccCHHHHHHHHHHHHHCCCEEEeCCEEEEEEEeCCeEEEEEEeCCceeEEEcCEEEECcCCCcccC
Confidence 899999997 57788899999999999999999999994 988864 334 333 4567999999999999999 6
Q ss_pred c--cccCCCCCCCCC
Q 018704 338 L--VKSLDLPKSPGG 350 (351)
Q Consensus 338 ~--~~~~gl~~~~~G 350 (351)
+ ++.+|++++++|
T Consensus 274 ~l~~~~~g~~~~~~G 288 (455)
T 1ebd_A 274 ELGLEQIGIKMTNRG 288 (455)
T ss_dssp SSSTTTTTCCBCTTS
T ss_pred cCChhhcCCccCCCC
Confidence 6 678888887666
No 48
>3dgz_A Thioredoxin reductase 2; oxidoreductase, rossmann, flavoprotein, FAD, mitochondrion, redox-active center, selenium, selenocysteine, transit PEPT; HET: FAD NA7; 2.25A {Mus musculus} PDB: 1zkq_A* 1zdl_A*
Probab=99.96 E-value=2e-28 Score=235.50 Aligned_cols=243 Identities=16% Similarity=0.214 Sum_probs=169.0
Q ss_pred CCCcEEEECCchhHHHHHHhhhccCceEEEEcCCC--------ccccchhhhhh---------------------hcccc
Q 018704 61 EKPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRN--------HMVFTPLLAST---------------------CVGTL 111 (351)
Q Consensus 61 ~~~~VvIIG~G~aGl~aA~~L~~~g~~v~vie~~~--------~~~~~~~~~~~---------------------~~~~~ 111 (351)
.++||+|||||||||+||..|++.|++|+|||+.+ .+... ++... ..+..
T Consensus 5 ~~~DvvVIG~G~aGl~aA~~la~~G~~V~liEk~~~~~~~~~~~~GGt-c~~~gciPsk~l~~~~~~~~~~~~~~~~g~~ 83 (488)
T 3dgz_A 5 QSFDLLVIGGGSGGLACAKEAAQLGKKVAVADYVEPSPRGTKWGLGGT-CVNVGCIPKKLMHQAALLGGMIRDAHHYGWE 83 (488)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCEEEECCCCCCTTSCCCCTTCH-HHHHSHHHHHHHHHHHHHHHHHHHHHHTTCC
T ss_pred CcCCEEEECCCHHHHHHHHHHHhCCCeEEEEEecccccccccCCcCCe-ecccCCcccHHHHHHHHHHHHHHHHHhcCcc
Confidence 45899999999999999999999999999999732 11110 00000 00000
Q ss_pred ----cccccccchhc----------cchhhhcCCCeEEEEEEeeeEeCCCCEEEEEeecCccccCCCceeEeeccEEEEe
Q 018704 112 ----EFRSVAEPIAR----------IQPAISREPGSYFFLSHCAGIDTDNHVVHCETVTDELRTLEPWKFKISYDKLVIA 177 (351)
Q Consensus 112 ----~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~v~~i~~~~~~v~~~~~~~~~~~~~~~~~~~~~d~lviA 177 (351)
...++...... .........++.++...+..++. +.+.+.. .++. ...+.||+||||
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~g~~~~~~~--~~v~v~~-~~g~------~~~~~~d~lViA 154 (488)
T 3dgz_A 84 VAQPVQHNWKTMAEAVQNHVKSLNWGHRVQLQDRKVKYFNIKASFVDE--HTVRGVD-KGGK------ATLLSAEHIVIA 154 (488)
T ss_dssp CCSSCCCCHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEECCEEEESSS--SEEEEEC-TTSC------EEEEEEEEEEEC
T ss_pred cCCcCccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEEEEEEccC--CeEEEEe-CCCc------eEEEECCEEEEc
Confidence 00011100110 01112233477787777766554 4555533 2332 238999999999
Q ss_pred cCCCcCCCC-CCCccccccccCCHHHHHHHHHHHHHhhhccCCCCCCHhhhcccCeEEEECCChHHHHHHHHHHHHHHHH
Q 018704 178 LGAEASTFG-IHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRD 256 (351)
Q Consensus 178 tG~~p~~p~-i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~v~VvGgG~~a~e~a~~l~~~~~~~ 256 (351)
||+.|+.|+ +||.++.+++. .+. +.+...| ++++|||||.+|+|+|..|.+++
T Consensus 155 TGs~p~~p~~i~G~~~~~~~~---~~~----------~~~~~~~----------~~vvViGgG~ig~E~A~~l~~~g--- 208 (488)
T 3dgz_A 155 TGGRPRYPTQVKGALEYGITS---DDI----------FWLKESP----------GKTLVVGASYVALECAGFLTGIG--- 208 (488)
T ss_dssp CCEEECCCSSCBTHHHHCBCH---HHH----------TTCSSCC----------CSEEEECCSHHHHHHHHHHHHTT---
T ss_pred CCCCCCCCCCCCCcccccCcH---HHH----------HhhhhcC----------CeEEEECCCHHHHHHHHHHHHcC---
Confidence 999999998 99975443321 111 2223333 48999999999999999999887
Q ss_pred HHhhhcCCCCccEEEEEeCCCCCCCCcHHHHHHHHHHhhhcCcEEEcCe-EEEEeC---C--eEEecC---Cc--EEecc
Q 018704 257 VRQRYSHVKDYIHVTLIEANEILSSFDDRLRHYATTQLSKSGVRLVRGI-VKDVDS---Q--KLILND---GT--EVPYG 325 (351)
Q Consensus 257 ~~~~~~~~~~~~~v~~~~~~~~l~~~~~~~~~~~~~~l~~~gV~~~~~~-v~~v~~---~--~v~~~~---g~--~~~~D 325 (351)
.+|+++++.++++.+++++.+.+.+.+++.||+++.+. +.+++. + .+.+.+ |+ ++++|
T Consensus 209 -----------~~Vtlv~~~~~l~~~d~~~~~~l~~~l~~~gv~~~~~~~v~~i~~~~~~~~~v~~~~~~~g~~~~~~~D 277 (488)
T 3dgz_A 209 -----------LDTTVMMRSIPLRGFDQQMSSLVTEHMESHGTQFLKGCVPSHIKKLPTNQLQVTWEDHASGKEDTGTFD 277 (488)
T ss_dssp -----------CCEEEEESSCSSTTSCHHHHHHHHHHHHHTTCEEEETEEEEEEEECTTSCEEEEEEETTTTEEEEEEES
T ss_pred -----------CceEEEEcCcccccCCHHHHHHHHHHHHHCCCEEEeCCEEEEEEEcCCCcEEEEEEeCCCCeeEEEECC
Confidence 89999999888899999999999999999999999994 888853 2 355544 54 47899
Q ss_pred EEEEecCCCCc-cc--cccCCCCCC-CCC
Q 018704 326 LLVWSTGVGPS-TL--VKSLDLPKS-PGG 350 (351)
Q Consensus 326 ~vi~a~G~~p~-~~--~~~~gl~~~-~~G 350 (351)
.||+|+|++|+ ++ ++.+|++++ ++|
T Consensus 278 ~vi~a~G~~p~~~~l~l~~~g~~~~~~~G 306 (488)
T 3dgz_A 278 TVLWAIGRVPETRTLNLEKAGISTNPKNQ 306 (488)
T ss_dssp EEEECSCEEESCGGGTGGGGTCCBCSSSC
T ss_pred EEEEcccCCcccCcCCccccCcEecCCCC
Confidence 99999999999 65 567788887 555
No 49
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans}
Probab=99.96 E-value=4.6e-28 Score=220.91 Aligned_cols=240 Identities=17% Similarity=0.179 Sum_probs=157.9
Q ss_pred CCcEEEECCchhHHHHHHhhhccCceEEEEcCCCccccchhhhhhhcccccccc--cccchhccchhhhcCCCeEEEEEE
Q 018704 62 KPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRNHMVFTPLLASTCVGTLEFRS--VAEPIARIQPAISREPGSYFFLSH 139 (351)
Q Consensus 62 ~~~VvIIG~G~aGl~aA~~L~~~g~~v~vie~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~ 139 (351)
.+||+|||||++|+++|..|++.|++|+|||++. ..............+.+.. ....+...........++.++..+
T Consensus 8 ~~dvvIIG~G~aGl~aA~~l~~~g~~v~lie~~~-~gg~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~gv~~~~~~ 86 (325)
T 2q7v_A 8 DYDVVIIGGGPAGLTAAIYTGRAQLSTLILEKGM-PGGQIAWSEEVENFPGFPEPIAGMELAQRMHQQAEKFGAKVEMDE 86 (325)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSC-TTGGGGGCSCBCCSTTCSSCBCHHHHHHHHHHHHHHTTCEEEECC
T ss_pred cCCEEEECCCHHHHHHHHHHHHcCCcEEEEeCCC-CCcccccccccccCCCCCCCCCHHHHHHHHHHHHHHcCCEEEeee
Confidence 4799999999999999999999999999999973 2111000000000011100 011122222222334467777788
Q ss_pred eeeEeCC--CCE-EEEEeecCccccCCCceeEeeccEEEEecCCCcCCCCCCCccccc-cccCCHHHHHHHHHHHHHhhh
Q 018704 140 CAGIDTD--NHV-VHCETVTDELRTLEPWKFKISYDKLVIALGAEASTFGIHGVKENA-TFLREVHHAQEIRRKLLLNLM 215 (351)
Q Consensus 140 v~~i~~~--~~~-v~~~~~~~~~~~~~~~~~~~~~d~lviAtG~~p~~p~i~g~~~~~-~~~~~~~~~~~~~~~~~~~~~ 215 (351)
|+.++.+ .+. +.+.. .++. .+.||+||+|||+.|+.|++||.+... ......... ...
T Consensus 87 v~~i~~~~~~~~~~~v~~-~~g~--------~~~~~~vv~AtG~~~~~~~i~g~~~~~~~~~~~~~~~---~~~------ 148 (325)
T 2q7v_A 87 VQGVQHDATSHPYPFTVR-GYNG--------EYRAKAVILATGADPRKLGIPGEDNFWGKGVSTCATC---DGF------ 148 (325)
T ss_dssp EEEEEECTTSSSCCEEEE-ESSC--------EEEEEEEEECCCEEECCCCCTTTTTTBTTTEESCHHH---HGG------
T ss_pred EEEEEeccCCCceEEEEE-CCCC--------EEEeCEEEECcCCCcCCCCCCChhhccCceEEEeccC---CHH------
Confidence 9999876 432 33322 3455 899999999999999999999875311 011111111 111
Q ss_pred ccCCCCCCHhhhcccCeEEEECCChHHHHHHHHHHHHHHHHHHhhhcCCCCccEEEEEeCCCCCCCCcHHHHHHHHHHhh
Q 018704 216 LSDVPGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEILSSFDDRLRHYATTQLS 295 (351)
Q Consensus 216 ~~~~p~~~~~~~~~~~~v~VvGgG~~a~e~a~~l~~~~~~~~~~~~~~~~~~~~v~~~~~~~~l~~~~~~~~~~~~~~l~ 295 (351)
....++++|||+|.+|+|+|..|.+.+ .+|+++++.+.+. .++.+. .+.++
T Consensus 149 -----------~~~~~~v~VvG~G~~g~e~A~~l~~~g--------------~~Vtlv~~~~~~~-~~~~~~---~~l~~ 199 (325)
T 2q7v_A 149 -----------FYKGKKVVVIGGGDAAVEEGMFLTKFA--------------DEVTVIHRRDTLR-ANKVAQ---ARAFA 199 (325)
T ss_dssp -----------GGTTCEEEEECCSHHHHHHHHHHTTTC--------------SEEEEECSSSSCC-SCHHHH---HHHHT
T ss_pred -----------HcCCCEEEEECCCHHHHHHHHHHHhcC--------------CEEEEEeCCCcCC-cchHHH---HHHHh
Confidence 023469999999999999999998776 8999999975432 223322 22334
Q ss_pred hcCcEEEcCe-EEEEeCC----eEEec---CCc--EEeccEEEEecCCCCc-cccccCCCCCCCCC
Q 018704 296 KSGVRLVRGI-VKDVDSQ----KLILN---DGT--EVPYGLLVWSTGVGPS-TLVKSLDLPKSPGG 350 (351)
Q Consensus 296 ~~gV~~~~~~-v~~v~~~----~v~~~---~g~--~~~~D~vi~a~G~~p~-~~~~~~gl~~~~~G 350 (351)
+.||+++.+. |+++..+ +|.+. +|+ ++++|.||+|+|++|+ ++++.+ ++++++|
T Consensus 200 ~~gv~i~~~~~v~~i~~~~~v~~v~~~~~~~g~~~~i~~D~vi~a~G~~p~~~~l~~~-~~~~~~g 264 (325)
T 2q7v_A 200 NPKMKFIWDTAVEEIQGADSVSGVKLRNLKTGEVSELATDGVFIFIGHVPNTAFVKDT-VSLRDDG 264 (325)
T ss_dssp CTTEEEECSEEEEEEEESSSEEEEEEEETTTCCEEEEECSEEEECSCEEESCGGGTTT-SCBCTTS
T ss_pred cCCceEecCCceEEEccCCcEEEEEEEECCCCcEEEEEcCEEEEccCCCCChHHHhhh-cccCCCc
Confidence 4699999995 9988764 57775 675 6899999999999999 788876 6666554
No 50
>1ojt_A Surface protein; redox-active center, glycolysis, oxidoreductase, NAD, flavop FAD, P64K; HET: FAD; 2.75A {Neisseria meningitidis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1bhy_A*
Probab=99.95 E-value=1e-27 Score=230.28 Aligned_cols=248 Identities=16% Similarity=0.137 Sum_probs=168.5
Q ss_pred CCcEEEECCchhHHHHHHhhhccCceEEEEcCCCccccchh----hhh---------------h-hcccccc---ccccc
Q 018704 62 KPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRNHMVFTPL----LAS---------------T-CVGTLEF---RSVAE 118 (351)
Q Consensus 62 ~~~VvIIG~G~aGl~aA~~L~~~g~~v~vie~~~~~~~~~~----~~~---------------~-~~~~~~~---~~~~~ 118 (351)
++||+|||||++|+++|..|++.|++|+|||+++.+..... .+. . ..+.... .++..
T Consensus 6 ~~dVvIIGaG~aGl~aA~~l~~~G~~V~liE~~~~~GG~~~~~g~~psk~ll~~~~~~~~~~~~~~~gi~~~~~~~~~~~ 85 (482)
T 1ojt_A 6 EYDVVVLGGGPGGYSAAFAAADEGLKVAIVERYKTLGGVCLNVGCIPSKALLHNAAVIDEVRHLAANGIKYPEPELDIDM 85 (482)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSCSSHHHHHHSHHHHHHHHHHHHHHHHHHHGGGGTCCCCCCCCCHHH
T ss_pred cCCEEEECCCHHHHHHHHHHHhCCCeEEEEeCCCCCCCceeeecccchHHHHHHHHHHHHHHHHHhCCcccCCCccCHHH
Confidence 47999999999999999999999999999999765421100 000 0 0010000 00000
Q ss_pred chh----------ccchhhhcCCCeEEEEEEeeeEeCCCCEEEEEeecCccc----cCCCceeEeeccEEEEecCCCcCC
Q 018704 119 PIA----------RIQPAISREPGSYFFLSHCAGIDTDNHVVHCETVTDELR----TLEPWKFKISYDKLVIALGAEAST 184 (351)
Q Consensus 119 ~~~----------~~~~~~~~~~~~~~~~~~v~~i~~~~~~v~~~~~~~~~~----~~~~~~~~~~~d~lviAtG~~p~~ 184 (351)
.+. ..........++.++...+..++ .+.+.+... ++.. .......++.||+||+|||+.|..
T Consensus 86 ~~~~~~~~~~~l~~~~~~~~~~~gv~~~~g~~~~~~--~~~v~v~~~-~g~~~~~~~~~g~~~~i~ad~lViAtGs~p~~ 162 (482)
T 1ojt_A 86 LRAYKDGVVSRLTGGLAGMAKSRKVDVIQGDGQFLD--PHHLEVSLT-AGDAYEQAAPTGEKKIVAFKNCIIAAGSRVTK 162 (482)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTTCEEEEEEEEEEE--TTEEEEEEE-EEEETTEEEEEEEEEEEEEEEEEECCCEEECC
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCcEEEeeEEEEcc--CCEEEEEec-CCcccccccccCcceEEEcCEEEECCCCCCCC
Confidence 000 00111223457777777655544 355555321 1200 000001279999999999999988
Q ss_pred CC-CCCccccccccCCHHHHHHHHHHHHHhhhccCCCCCCHhhhcccCeEEEECCChHHHHHHHHHHHHHHHHHHhhhcC
Q 018704 185 FG-IHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSH 263 (351)
Q Consensus 185 p~-i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~v~VvGgG~~a~e~a~~l~~~~~~~~~~~~~~ 263 (351)
|+ +| .+..+ .+..++. .+... .++++|||||.+|+|+|..|.+++
T Consensus 163 ~~~i~-~~~~v---~~~~~~~----------~~~~~----------~~~vvViGgG~ig~E~A~~l~~~G---------- 208 (482)
T 1ojt_A 163 LPFIP-EDPRI---IDSSGAL----------ALKEV----------PGKLLIIGGGIIGLEMGTVYSTLG---------- 208 (482)
T ss_dssp CSSCC-CCTTE---ECHHHHT----------TCCCC----------CSEEEEESCSHHHHHHHHHHHHHT----------
T ss_pred CCCCC-ccCcE---EcHHHHh----------ccccc----------CCeEEEECCCHHHHHHHHHHHHcC----------
Confidence 86 66 32322 2332221 12222 359999999999999999999887
Q ss_pred CCCccEEEEEeCC-CCCCCCcHHHHHHHHHHhhhcCcEEEcC-eEEEEeCC----eEEecC----CcEEeccEEEEecCC
Q 018704 264 VKDYIHVTLIEAN-EILSSFDDRLRHYATTQLSKSGVRLVRG-IVKDVDSQ----KLILND----GTEVPYGLLVWSTGV 333 (351)
Q Consensus 264 ~~~~~~v~~~~~~-~~l~~~~~~~~~~~~~~l~~~gV~~~~~-~v~~v~~~----~v~~~~----g~~~~~D~vi~a~G~ 333 (351)
.+|+++++. .+++.+++++.+.+.+.+++.||+++++ +|.+++.+ .+.+.+ |+++++|.||+|+|+
T Consensus 209 ----~~Vtlv~~~~~~l~~~~~~~~~~l~~~l~~~gV~i~~~~~v~~i~~~~~~~~v~~~~~~~~g~~~~~D~vv~a~G~ 284 (482)
T 1ojt_A 209 ----SRLDVVEMMDGLMQGADRDLVKVWQKQNEYRFDNIMVNTKTVAVEPKEDGVYVTFEGANAPKEPQRYDAVLVAAGR 284 (482)
T ss_dssp ----CEEEEECSSSSSSTTSCHHHHHHHHHHHGGGEEEEECSCEEEEEEEETTEEEEEEESSSCCSSCEEESCEEECCCE
T ss_pred ----CeEEEEEECCccccccCHHHHHHHHHHHHhcCCEEEECCEEEEEEEcCCeEEEEEeccCCCceEEEcCEEEECcCC
Confidence 899999997 5788899999999999999999999999 49888642 466666 778999999999999
Q ss_pred CCc-cc--cccCCCCCCCCC
Q 018704 334 GPS-TL--VKSLDLPKSPGG 350 (351)
Q Consensus 334 ~p~-~~--~~~~gl~~~~~G 350 (351)
+|+ ++ ++.+|++++++|
T Consensus 285 ~p~~~~l~~~~~gl~~~~~G 304 (482)
T 1ojt_A 285 APNGKLISAEKAGVAVTDRG 304 (482)
T ss_dssp EECGGGTTGGGTTCCCCTTS
T ss_pred CcCCCCCChhhcCceeCCCC
Confidence 999 66 688898887766
No 51
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=99.95 E-value=4e-28 Score=222.08 Aligned_cols=240 Identities=13% Similarity=0.129 Sum_probs=164.2
Q ss_pred CCcEEEECCchhHHHHHHhhhccCceEEEEcCCCccccchhh--hhh-hccccccccc-ccchhccchhhhcCCCeEE-E
Q 018704 62 KPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRNHMVFTPLL--AST-CVGTLEFRSV-AEPIARIQPAISREPGSYF-F 136 (351)
Q Consensus 62 ~~~VvIIG~G~aGl~aA~~L~~~g~~v~vie~~~~~~~~~~~--~~~-~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~-~ 136 (351)
++||+|||||++|+++|..|++.|++|+|||+++.+...... +.. ....+.+..+ ...+...........++.+ .
T Consensus 5 ~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 84 (335)
T 2zbw_A 5 HTDVLIVGAGPTGLFAGFYVGMRGLSFRFVDPLPEPGGQLTALYPEKYIYDVAGFPKVYAKDLVKGLVEQVAPFNPVYSL 84 (335)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSSCHHHHHTCTTSEECCSTTCSSEEHHHHHHHHHHHHGGGCCEEEE
T ss_pred cCcEEEECCCHHHHHHHHHHHhCCCCEEEEeCCCCCCCeeeccCCCceeeccCCCCCCCHHHHHHHHHHHHHHcCCEEEe
Confidence 479999999999999999999999999999998765322110 000 0000000000 0111111111222234454 3
Q ss_pred EEEeeeEeCCCCEEEEEeecCccccCCCceeEeeccEEEEecCC---CcCCCCCCCcccccc-cc-CCHHHHHHHHHHHH
Q 018704 137 LSHCAGIDTDNHVVHCETVTDELRTLEPWKFKISYDKLVIALGA---EASTFGIHGVKENAT-FL-REVHHAQEIRRKLL 211 (351)
Q Consensus 137 ~~~v~~i~~~~~~v~~~~~~~~~~~~~~~~~~~~~d~lviAtG~---~p~~p~i~g~~~~~~-~~-~~~~~~~~~~~~~~ 211 (351)
..+|+.++.+.+.+.+.. .++. .+.||+||+|||. .|..|+++|.+.... .. ..+.+.
T Consensus 85 ~~~v~~i~~~~~~~~v~~-~~g~--------~~~~~~lv~AtG~~~~~p~~~~i~g~~~~~~~~~~~~~~~~-------- 147 (335)
T 2zbw_A 85 GERAETLEREGDLFKVTT-SQGN--------AYTAKAVIIAAGVGAFEPRRIGAPGEREFEGRGVYYAVKSK-------- 147 (335)
T ss_dssp SCCEEEEEEETTEEEEEE-TTSC--------EEEEEEEEECCTTSEEEECCCCCTTTTTTBTTTEESSCSCG--------
T ss_pred CCEEEEEEECCCEEEEEE-CCCC--------EEEeCEEEECCCCCCCCCCCCCCCChhhccCcEEEEecCch--------
Confidence 458888887766666643 4455 7999999999999 577888888642110 00 001000
Q ss_pred HhhhccCCCCCCHhhhcccCeEEEECCChHHHHHHHHHHHHHHHHHHhhhcCCCCccEEEEEeCCCCCCCCcHHHHHHHH
Q 018704 212 LNLMLSDVPGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEILSSFDDRLRHYAT 291 (351)
Q Consensus 212 ~~~~~~~~p~~~~~~~~~~~~v~VvGgG~~a~e~a~~l~~~~~~~~~~~~~~~~~~~~v~~~~~~~~l~~~~~~~~~~~~ 291 (351)
.....++++|||+|.+|+|+|..|.+.+ .+|+++++.+.+.. .+...+.+.
T Consensus 148 --------------~~~~~~~v~viG~G~~g~e~a~~l~~~g--------------~~V~~v~~~~~~~~-~~~~~~~l~ 198 (335)
T 2zbw_A 148 --------------AEFQGKRVLIVGGGDSAVDWALNLLDTA--------------RRITLIHRRPQFRA-HEASVKELM 198 (335)
T ss_dssp --------------GGGTTCEEEEECSSHHHHHHHHHTTTTS--------------SEEEEECSSSSCCS-CHHHHHHHH
T ss_pred --------------hhcCCCEEEEECCCHHHHHHHHHHHhhC--------------CEEEEEEcCCccCc-cHHHHHHHH
Confidence 0023469999999999999999998765 89999999754322 246677788
Q ss_pred HHhhhcCcEEEcC-eEEEEeCC----eEEec---CC--cEEeccEEEEecCCCCc-cccccCCCCCC
Q 018704 292 TQLSKSGVRLVRG-IVKDVDSQ----KLILN---DG--TEVPYGLLVWSTGVGPS-TLVKSLDLPKS 347 (351)
Q Consensus 292 ~~l~~~gV~~~~~-~v~~v~~~----~v~~~---~g--~~~~~D~vi~a~G~~p~-~~~~~~gl~~~ 347 (351)
+.+++.||+++.+ .|++++.+ +|.+. +| .++++|.||+|+|++|+ ++++.++++++
T Consensus 199 ~~l~~~gv~v~~~~~v~~i~~~~~~~~v~~~~~~~g~~~~i~~D~vi~a~G~~p~~~~l~~~~~~~~ 265 (335)
T 2zbw_A 199 KAHEEGRLEVLTPYELRRVEGDERVRWAVVFHNQTQEELALEVDAVLILAGYITKLGPLANWGLALE 265 (335)
T ss_dssp HHHHTTSSEEETTEEEEEEEESSSEEEEEEEETTTCCEEEEECSEEEECCCEEEECGGGGGSCCCEE
T ss_pred hccccCCeEEecCCcceeEccCCCeeEEEEEECCCCceEEEecCEEEEeecCCCCchHhhhcceecc
Confidence 8889999999999 49988764 57776 77 57999999999999999 79998887765
No 52
>2a8x_A Dihydrolipoyl dehydrogenase, E3 component of alpha; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha keto acid dehydrogenase; HET: FAD; 2.40A {Mycobacterium tuberculosis} PDB: 3ii4_A*
Probab=99.95 E-value=2.6e-28 Score=233.38 Aligned_cols=242 Identities=17% Similarity=0.195 Sum_probs=167.8
Q ss_pred CCcEEEECCchhHHHHHHhhhccCceEEEEcCCCccccc-------h---hhhh------h-----hcccc-----cccc
Q 018704 62 KPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRNHMVFT-------P---LLAS------T-----CVGTL-----EFRS 115 (351)
Q Consensus 62 ~~~VvIIG~G~aGl~aA~~L~~~g~~v~vie~~~~~~~~-------~---~~~~------~-----~~~~~-----~~~~ 115 (351)
++||+|||||++|+++|..|++.|++|+|||++. +... | ++.. . ..+.. .+..
T Consensus 3 ~~dvvIIGaG~aGl~aA~~l~~~G~~V~liE~~~-~gG~~~~~g~~psk~ll~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 81 (464)
T 2a8x_A 3 HYDVVVLGAGPGGYVAAIRAAQLGLSTAIVEPKY-WGGVCLNVGCIPSKALLRNAELVHIFTKDAKAFGISGEVTFDYGI 81 (464)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSC-TTHHHHHHSHHHHHHHHHHHHHHHHHHHHTTTTTEEECCEECHHH
T ss_pred cCCEEEECCCHHHHHHHHHHHhCCCeEEEEeCCC-CCCcccccCchhhHHHHHHHHHHHHHHHHHHhcCCCCCCccCHHH
Confidence 3799999999999999999999999999999973 2100 0 0000 0 00000 0000
Q ss_pred ccc-------chhccchhhhcCCCeEEEEEEeeeEeCCCCEEEEEeecCccccCCCceeEeeccEEEEecCCCcCCCCCC
Q 018704 116 VAE-------PIARIQPAISREPGSYFFLSHCAGIDTDNHVVHCETVTDELRTLEPWKFKISYDKLVIALGAEASTFGIH 188 (351)
Q Consensus 116 ~~~-------~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~v~~~~~~~~~~~~~~~~~~~~~d~lviAtG~~p~~p~i~ 188 (351)
+.. .+...........++.++......+ +.+.+.+.. .++. ..++.||+||+|||+.|+.|+++
T Consensus 82 ~~~~~~~~~~~l~~~l~~~~~~~gv~~~~g~~~~i--d~~~v~V~~-~~G~------~~~~~~d~lViAtG~~~~~~~~~ 152 (464)
T 2a8x_A 82 AYDRSRKVAEGRVAGVHFLMKKNKITEIHGYGTFA--DANTLLVDL-NDGG------TESVTFDNAIIATGSSTRLVPGT 152 (464)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTTCEEECEEEEES--SSSEEEEEE-TTSC------CEEEEEEEEEECCCEEECCCTTC
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCCEEEEeEEEEe--cCCeEEEEe-CCCc------eEEEEcCEEEECCCCCCCCCCCC
Confidence 000 0000011122335777776665443 455666643 3341 12899999999999999999888
Q ss_pred CccccccccCCHHHHHHHHHHHHHhhhccCCCCCCHhhhcccCeEEEECCChHHHHHHHHHHHHHHHHHHhhhcCCCCcc
Q 018704 189 GVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYI 268 (351)
Q Consensus 189 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~v~VvGgG~~a~e~a~~l~~~~~~~~~~~~~~~~~~~ 268 (351)
|.+..+ .+..+... +.. ..++++|||||.+|+|+|..|.+++ .
T Consensus 153 g~~~~~---~~~~~~~~----------~~~----------~~~~vvViGgG~~g~E~A~~l~~~g--------------~ 195 (464)
T 2a8x_A 153 SLSANV---VTYEEQIL----------SRE----------LPKSIIIAGAGAIGMEFGYVLKNYG--------------V 195 (464)
T ss_dssp CCBTTE---ECHHHHHT----------CSS----------CCSEEEEECCSHHHHHHHHHHHHTT--------------C
T ss_pred CCCceE---EecHHHhh----------ccc----------cCCeEEEECCcHHHHHHHHHHHHcC--------------C
Confidence 875432 23322221 111 2359999999999999999999887 8
Q ss_pred EEEEEeCC-CCCCCCcHHHHHHHHHHhhhcCcEEEcCe-EEEEeCC----eEEec-CC--cEEeccEEEEecCCCCc-cc
Q 018704 269 HVTLIEAN-EILSSFDDRLRHYATTQLSKSGVRLVRGI-VKDVDSQ----KLILN-DG--TEVPYGLLVWSTGVGPS-TL 338 (351)
Q Consensus 269 ~v~~~~~~-~~l~~~~~~~~~~~~~~l~~~gV~~~~~~-v~~v~~~----~v~~~-~g--~~~~~D~vi~a~G~~p~-~~ 338 (351)
+|+++++. .+++.+++++.+.+.+.+++.||+++.+. |++++.+ .+.+. +| +++++|.||+|+|++|+ ++
T Consensus 196 ~Vtlv~~~~~~l~~~~~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~~~~~v~~~~~g~~~~~~~D~vv~a~G~~p~~~~ 275 (464)
T 2a8x_A 196 DVTIVEFLPRALPNEDADVSKEIEKQFKKLGVTILTATKVESIADGGSQVTVTVTKDGVAQELKAEKVLQAIGFAPNVEG 275 (464)
T ss_dssp EEEEECSSSSSSTTSCHHHHHHHHHHHHHHTCEEECSCEEEEEEECSSCEEEEEESSSCEEEEEESEEEECSCEEECCSS
T ss_pred eEEEEEcCCccccccCHHHHHHHHHHHHHcCCEEEeCcEEEEEEEcCCeEEEEEEcCCceEEEEcCEEEECCCCCccCCC
Confidence 99999997 57888999999999999999999999994 9998753 24443 66 67999999999999999 66
Q ss_pred --cccCCCCCCCCC
Q 018704 339 --VKSLDLPKSPGG 350 (351)
Q Consensus 339 --~~~~gl~~~~~G 350 (351)
++.+|++++++|
T Consensus 276 l~~~~~gl~~~~~G 289 (464)
T 2a8x_A 276 YGLDKAGVALTDRK 289 (464)
T ss_dssp SCHHHHTCCBCTTS
T ss_pred CCchhcCCccCCCC
Confidence 677788877655
No 53
>1dxl_A Dihydrolipoamide dehydrogenase; oxidoreductase, multienzyme complex protein, pyruvate dehydrogenase complex, glycine decarboxylase complex; HET: FAD; 3.15A {Pisum sativum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=99.95 E-value=2.9e-28 Score=233.44 Aligned_cols=244 Identities=20% Similarity=0.253 Sum_probs=170.0
Q ss_pred CCCcEEEECCchhHHHHHHhhhccCceEEEEcCCCccccchhh----hh-----------------hhcccccc---ccc
Q 018704 61 EKPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRNHMVFTPLL----AS-----------------TCVGTLEF---RSV 116 (351)
Q Consensus 61 ~~~~VvIIG~G~aGl~aA~~L~~~g~~v~vie~~~~~~~~~~~----~~-----------------~~~~~~~~---~~~ 116 (351)
.++||+|||||++|+++|..|++.|++|+|||+++.+...... +. ...+.... .++
T Consensus 5 ~~~dvvIIGaG~aGl~aA~~l~~~g~~V~liE~~~~~GG~~~~~g~~p~k~l~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 84 (470)
T 1dxl_A 5 DENDVVIIGGGPGGYVAAIKAAQLGFKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAKHSFANHGVKVSNVEIDL 84 (470)
T ss_dssp CCCCEEEECCSHHHHHHHHHHHHHTCCEEEEECSSSSCCSHHHHSHHHHHHHHHHHHHHHHHHHTHHHHTEEESCEEECH
T ss_pred ccCCEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCCccccccCcCccchHHHHHHHHHHHHHHHHHHhcCcccCCCccCH
Confidence 4589999999999999999999999999999998654211000 00 00011000 000
Q ss_pred ccc----------hhccchhhhcCCCeEEEEEEeeeEeCCCCEEEEEeecCccccCCCceeEeeccEEEEecCCCcCCCC
Q 018704 117 AEP----------IARIQPAISREPGSYFFLSHCAGIDTDNHVVHCETVTDELRTLEPWKFKISYDKLVIALGAEASTFG 186 (351)
Q Consensus 117 ~~~----------~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~v~~~~~~~~~~~~~~~~~~~~~d~lviAtG~~p~~p~ 186 (351)
... +...........++.++...+..++. +.+.+.. .++. ...+.||+||+|||+.|+.|+
T Consensus 85 ~~~~~~~~~~~~~l~~~~~~~~~~~gv~~~~g~~~~~~~--~~~~v~~-~~G~------~~~i~~d~lIiAtGs~p~~p~ 155 (470)
T 1dxl_A 85 AAMMGQKDKAVSNLTRGIEGLFKKNKVTYVKGYGKFVSP--SEISVDT-IEGE------NTVVKGKHIIIATGSDVKSLP 155 (470)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTCEEEESCEEEEET--TEEEECC-SSSC------CEEEECSEEEECCCEEECCBT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeEEEEecC--CEEEEEe-CCCc------eEEEEcCEEEECCCCCCCCCC
Confidence 000 00001112223467777766655554 4555532 3331 127999999999999999998
Q ss_pred CCCccc-cccccCCHHHHHHHHHHHHHhhhccCCCCCCHhhhcccCeEEEECCChHHHHHHHHHHHHHHHHHHhhhcCCC
Q 018704 187 IHGVKE-NATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVK 265 (351)
Q Consensus 187 i~g~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~v~VvGgG~~a~e~a~~l~~~~~~~~~~~~~~~~ 265 (351)
++|.+. .++ +..+.. .+... .++++|||||.+|+|+|..|.+++
T Consensus 156 ~~g~~~~~v~---~~~~~~----------~~~~~----------~~~vvViGgG~~g~e~A~~l~~~g------------ 200 (470)
T 1dxl_A 156 GVTIDEKKIV---SSTGAL----------ALSEI----------PKKLVVIGAGYIGLEMGSVWGRIG------------ 200 (470)
T ss_dssp TBCCCSSSEE---CHHHHT----------TCSSC----------CSEEEESCCSHHHHHHHHHHHHHT------------
T ss_pred CCCCCcccEE---eHHHhh----------hhhhc----------CCeEEEECCCHHHHHHHHHHHHcC------------
Confidence 888753 232 222211 11222 359999999999999999999887
Q ss_pred CccEEEEEeCC-CCCCCCcHHHHHHHHHHhhhcCcEEEcCe-EEEEeCC----eEEec---CC--cEEeccEEEEecCCC
Q 018704 266 DYIHVTLIEAN-EILSSFDDRLRHYATTQLSKSGVRLVRGI-VKDVDSQ----KLILN---DG--TEVPYGLLVWSTGVG 334 (351)
Q Consensus 266 ~~~~v~~~~~~-~~l~~~~~~~~~~~~~~l~~~gV~~~~~~-v~~v~~~----~v~~~---~g--~~~~~D~vi~a~G~~ 334 (351)
.+|+++++. .+++.+++++.+.+.+.+++.||+++.+. |.+++.+ .+.+. +| +++++|.||+|+|++
T Consensus 201 --~~Vtli~~~~~~l~~~~~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~~~~~v~~~~~~~g~~~~~~~D~vv~a~G~~ 278 (470)
T 1dxl_A 201 --SEVTVVEFASEIVPTMDAEIRKQFQRSLEKQGMKFKLKTKVVGVDTSGDGVKLTVEPSAGGEQTIIEADVVLVSAGRT 278 (470)
T ss_dssp --CEEEEECSSSSSSTTSCHHHHHHHHHHHHHSSCCEECSEEEEEEECSSSSEEEEEEESSSCCCEEEEESEEECCCCEE
T ss_pred --CcEEEEEcCCcccccccHHHHHHHHHHHHHcCCEEEeCCEEEEEEEcCCeEEEEEEecCCCcceEEECCEEEECCCCC
Confidence 899999997 57788999999999999999999999995 9999763 24443 45 679999999999999
Q ss_pred Cc-cc--cccCCCCCCCCC
Q 018704 335 PS-TL--VKSLDLPKSPGG 350 (351)
Q Consensus 335 p~-~~--~~~~gl~~~~~G 350 (351)
|+ ++ ++.+|++++++|
T Consensus 279 p~~~~l~~~~~gl~~~~~G 297 (470)
T 1dxl_A 279 PFTSGLNLDKIGVETDKLG 297 (470)
T ss_dssp ECCTTSCCTTTTCCBCSSS
T ss_pred cCCCCCCchhcCCccCCCC
Confidence 99 66 678888887665
No 54
>3o0h_A Glutathione reductase; ssgcid, structur genomics, seattle structural genomics center for infectious gluathione reductase, oxidoreductase; HET: FAD; 1.90A {Bartonella henselae}
Probab=99.95 E-value=1.6e-27 Score=228.90 Aligned_cols=238 Identities=21% Similarity=0.290 Sum_probs=170.6
Q ss_pred CCcEEEECCchhHHHHHHhhhccCceEEEEcCCCccccchhh----hh---------------h-hcccc------cccc
Q 018704 62 KPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRNHMVFTPLL----AS---------------T-CVGTL------EFRS 115 (351)
Q Consensus 62 ~~~VvIIG~G~aGl~aA~~L~~~g~~v~vie~~~~~~~~~~~----~~---------------~-~~~~~------~~~~ 115 (351)
.+||+|||||++||++|+.|++.|++|+|||++. +...... +. . ..+.. .+..
T Consensus 26 ~~DVvVIGgG~aGl~aA~~la~~G~~V~liEk~~-~GG~~~~~gcip~k~l~~~a~~~~~~~~~~~~g~~~~~~~~~~~~ 104 (484)
T 3o0h_A 26 DFDLFVIGSGSGGVRAARLAGALGKRVAIAEEYR-IGGTCVIRGCVPKKLYFYASQYAQEFSKSIGFGWKYADPIFNWEK 104 (484)
T ss_dssp SEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSC-TTHHHHHHSHHHHHHHHHHHHHHHHHHHHGGGTBCCCCCEECHHH
T ss_pred CCCEEEECcCHHHHHHHHHHHhCcCEEEEEeCCC-CCCceeccCccccHHHHHHHHHHHHHHHHHhCCcccCCCccCHHH
Confidence 5799999999999999999999999999999943 2111000 00 0 00000 0000
Q ss_pred c-------ccchhccchhhhcCCCeEEEEEEeeeEeCCCCEEEEEeecCccccCCCceeEeeccEEEEecCCCcC-CCCC
Q 018704 116 V-------AEPIARIQPAISREPGSYFFLSHCAGIDTDNHVVHCETVTDELRTLEPWKFKISYDKLVIALGAEAS-TFGI 187 (351)
Q Consensus 116 ~-------~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~v~~~~~~~~~~~~~~~~~~~~~d~lviAtG~~p~-~p~i 187 (351)
+ ...+...........++.++...+..++. +.+.+. .++. .+.||+||+|||+.|. .|.+
T Consensus 105 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~g~~~~i~~--~~v~v~--~~~~--------~~~~d~lviAtG~~p~~~p~i 172 (484)
T 3o0h_A 105 LVAAKNKEISRLEGLYREGLQNSNVHIYESRAVFVDE--HTLELS--VTGE--------RISAEKILIATGAKIVSNSAI 172 (484)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTTCEEEESCEEEEET--TEEEET--TTCC--------EEEEEEEEECCCEEECCC--C
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCCEEEEeEEEEeeC--CEEEEe--cCCe--------EEEeCEEEEccCCCcccCCCC
Confidence 0 00111111222334578888887777764 455542 1444 8999999999999999 8999
Q ss_pred CCccccccccCCHHHHHHHHHHHHHhhhccCCCCCCHhhhcccCeEEEECCChHHHHHHHHHHHHHHHHHHhhhcCCCCc
Q 018704 188 HGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDY 267 (351)
Q Consensus 188 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~v~VvGgG~~a~e~a~~l~~~~~~~~~~~~~~~~~~ 267 (351)
||.+ .+++..++.. +... .++++|||+|.+|+|+|..+.+++
T Consensus 173 ~G~~-~~~~~~~~~~-------------~~~~----------~~~v~ViGgG~~g~e~A~~l~~~g-------------- 214 (484)
T 3o0h_A 173 KGSD-LCLTSNEIFD-------------LEKL----------PKSIVIVGGGYIGVEFANIFHGLG-------------- 214 (484)
T ss_dssp BTGG-GSBCTTTGGG-------------CSSC----------CSEEEEECCSHHHHHHHHHHHHTT--------------
T ss_pred CCcc-ccccHHHHHh-------------HHhc----------CCcEEEECcCHHHHHHHHHHHHcC--------------
Confidence 9974 3433333321 1222 359999999999999999999887
Q ss_pred cEEEEEeCC-CCCCCCcHHHHHHHHHHhhhcCcEEEcCe-EEEEeCC----eEEecCCcEEeccEEEEecCCCCc-cc--
Q 018704 268 IHVTLIEAN-EILSSFDDRLRHYATTQLSKSGVRLVRGI-VKDVDSQ----KLILNDGTEVPYGLLVWSTGVGPS-TL-- 338 (351)
Q Consensus 268 ~~v~~~~~~-~~l~~~~~~~~~~~~~~l~~~gV~~~~~~-v~~v~~~----~v~~~~g~~~~~D~vi~a~G~~p~-~~-- 338 (351)
.+|+++++. .+++.+++++.+.+.+.+++.||+++.+. |++++.+ .+.+.+|+++++|.||+|+|++|+ .+
T Consensus 215 ~~Vtli~~~~~~l~~~~~~~~~~l~~~l~~~Gv~i~~~~~V~~i~~~~~~v~v~~~~g~~i~aD~Vi~A~G~~p~~~~l~ 294 (484)
T 3o0h_A 215 VKTTLLHRGDLILRNFDYDLRQLLNDAMVAKGISIIYEATVSQVQSTENCYNVVLTNGQTICADRVMLATGRVPNTTGLG 294 (484)
T ss_dssp CEEEEECSSSSSSTTSCHHHHHHHHHHHHHHTCEEESSCCEEEEEECSSSEEEEETTSCEEEESEEEECCCEEECCTTCC
T ss_pred CeEEEEECCCccccccCHHHHHHHHHHHHHCCCEEEeCCEEEEEEeeCCEEEEEECCCcEEEcCEEEEeeCCCcCCCCCC
Confidence 899999997 57888999999999999999999999995 9988754 578889989999999999999999 55
Q ss_pred cccCCCCCCCCC
Q 018704 339 VKSLDLPKSPGG 350 (351)
Q Consensus 339 ~~~~gl~~~~~G 350 (351)
++.+|++++++|
T Consensus 295 l~~~g~~~~~~G 306 (484)
T 3o0h_A 295 LERAGVKVNEFG 306 (484)
T ss_dssp HHHHTCCBCTTS
T ss_pred hhhcCceECCCC
Confidence 567788877766
No 55
>4dna_A Probable glutathione reductase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; HET: FAD; 2.80A {Sinorhizobium meliloti}
Probab=99.95 E-value=4.3e-28 Score=231.75 Aligned_cols=237 Identities=17% Similarity=0.236 Sum_probs=168.9
Q ss_pred CCcEEEECCchhHHHHHHhhhccCceEEEEcCCCccccchh----hhh-----------hh-----ccc------ccccc
Q 018704 62 KPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRNHMVFTPL----LAS-----------TC-----VGT------LEFRS 115 (351)
Q Consensus 62 ~~~VvIIG~G~aGl~aA~~L~~~g~~v~vie~~~~~~~~~~----~~~-----------~~-----~~~------~~~~~ 115 (351)
++||+|||||++||++|+.|++.|++|+|||+.. +..... .+. .. .+. ..+..
T Consensus 5 ~~DVvVIGaG~aGl~aA~~la~~G~~V~liEk~~-~GG~~~~~gcip~k~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 83 (463)
T 4dna_A 5 DYDLFVIGGGSGGVRSGRLAAALGKKVAIAEEFR-YGGTCVIRGCVPKKLYVYASQFAEHFEDAAGFGWTVGESRFDWAK 83 (463)
T ss_dssp SEEEEEECCSHHHHHHHHHHHTTTCCEEEEESSC-TTHHHHHHSHHHHHHHHHHHHHHHHHHHGGGGTEEECCCEECHHH
T ss_pred CCcEEEECcCHHHHHHHHHHHhCCCEEEEEeCCC-CCCcccccCchhhHHHHHHHHHHHHHHHHHhcCcccCCCCcCHHH
Confidence 5899999999999999999999999999999943 211000 000 00 000 00000
Q ss_pred cc-------cchhccchhhhcCCCeEEEEEEeeeEeCCCCEEEEEeecCccccCCCceeEeeccEEEEecCCCcC-CCCC
Q 018704 116 VA-------EPIARIQPAISREPGSYFFLSHCAGIDTDNHVVHCETVTDELRTLEPWKFKISYDKLVIALGAEAS-TFGI 187 (351)
Q Consensus 116 ~~-------~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~v~~~~~~~~~~~~~~~~~~~~~d~lviAtG~~p~-~p~i 187 (351)
+. ..+......+....++.++...+..++ .+.+.+. .++. .+.||+||+|||+.|. .|++
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~gv~~~~g~~~~i~--~~~v~~~--~~~~--------~~~~d~lviAtG~~p~~~p~i 151 (463)
T 4dna_A 84 LVAAKEQEIARLEGLYRKGLANAGAEILDTRAELAG--PNTVKLL--ASGK--------TVTAERIVIAVGGHPSPHDAL 151 (463)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTCEEEESCEEESS--SSEEEET--TTTE--------EEEEEEEEECCCEEECCCTTS
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCCEEEEEEEEEee--CCEEEEe--cCCe--------EEEeCEEEEecCCCcccCCCC
Confidence 00 011111112223346777777666654 3455542 2344 8999999999999999 9999
Q ss_pred CCccccccccCCHHHHHHHHHHHHHhhhccCCCCCCHhhhcccCeEEEECCChHHHHHHHHHHHHHHHHHHhhhcCCCCc
Q 018704 188 HGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDY 267 (351)
Q Consensus 188 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~v~VvGgG~~a~e~a~~l~~~~~~~~~~~~~~~~~~ 267 (351)
||.+ .++ +..+. +.+... .++++|||+|.+|+|+|..+.+++
T Consensus 152 ~G~~-~~~---~~~~~----------~~~~~~----------~~~v~ViGgG~~g~e~A~~l~~~g-------------- 193 (463)
T 4dna_A 152 PGHE-LCI---TSNEA----------FDLPAL----------PESILIAGGGYIAVEFANIFHGLG-------------- 193 (463)
T ss_dssp TTGG-GCB---CHHHH----------TTCSSC----------CSEEEEECCSHHHHHHHHHHHHTT--------------
T ss_pred CCcc-ccc---cHHHH----------hhhhcC----------CCeEEEECCCHHHHHHHHHHHHcC--------------
Confidence 9974 222 22221 112222 359999999999999999999887
Q ss_pred cEEEEEeCC-CCCCCCcHHHHHHHHHHhhhcCcEEEcCe-EEEEeCC-----eEE-ecCCcEEeccEEEEecCCCCc-cc
Q 018704 268 IHVTLIEAN-EILSSFDDRLRHYATTQLSKSGVRLVRGI-VKDVDSQ-----KLI-LNDGTEVPYGLLVWSTGVGPS-TL 338 (351)
Q Consensus 268 ~~v~~~~~~-~~l~~~~~~~~~~~~~~l~~~gV~~~~~~-v~~v~~~-----~v~-~~~g~~~~~D~vi~a~G~~p~-~~ 338 (351)
.+|+++++. .+++.+++++.+.+.+.+++.||+++.+. |++++.+ .|. +.+|+ +++|.||+|+|++|+ .+
T Consensus 194 ~~Vt~v~~~~~~l~~~~~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~~~~v~~~~~g~-i~aD~Vv~a~G~~p~~~~ 272 (463)
T 4dna_A 194 VKTTLIYRGKEILSRFDQDMRRGLHAAMEEKGIRILCEDIIQSVSADADGRRVATTMKHGE-IVADQVMLALGRMPNTNG 272 (463)
T ss_dssp CEEEEECSSSSSSTTSCHHHHHHHHHHHHHTTCEEECSCCEEEEEECTTSCEEEEESSSCE-EEESEEEECSCEEESCTT
T ss_pred CeEEEEEcCCccccccCHHHHHHHHHHHHHCCCEEECCCEEEEEEEcCCCEEEEEEcCCCe-EEeCEEEEeeCcccCCCC
Confidence 899999997 57788999999999999999999999995 9888653 577 77887 999999999999999 55
Q ss_pred --cccCCCCCCCCC
Q 018704 339 --VKSLDLPKSPGG 350 (351)
Q Consensus 339 --~~~~gl~~~~~G 350 (351)
++.+|++++++|
T Consensus 273 l~l~~~g~~~~~~G 286 (463)
T 4dna_A 273 LGLEAAGVRTNELG 286 (463)
T ss_dssp SSTGGGTCCBCTTS
T ss_pred CCccccCceECCCC
Confidence 678888888776
No 56
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A*
Probab=99.95 E-value=1e-27 Score=217.06 Aligned_cols=237 Identities=14% Similarity=0.076 Sum_probs=161.3
Q ss_pred CcEEEECCchhHHHHHHhhhccCc-eEEEEcCCCccccchhhhhhhccccccc-cc-ccchhccchhhhcCCCeEEEEEE
Q 018704 63 PRVVVLGSGWAGCRLMKGIDTSLY-DVVCVSPRNHMVFTPLLASTCVGTLEFR-SV-AEPIARIQPAISREPGSYFFLSH 139 (351)
Q Consensus 63 ~~VvIIG~G~aGl~aA~~L~~~g~-~v~vie~~~~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~~~~~~~~~~~~~~~~~ 139 (351)
+||+|||||++|+++|..|++.|+ +|+|||++..... ..........+.+. .+ ...+...........++.++..+
T Consensus 2 ~dvvIIG~G~aGl~aA~~l~~~g~~~v~lie~~~~gg~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~~~~~~ 80 (311)
T 2q0l_A 2 IDCAIIGGGPAGLSAGLYATRGGVKNAVLFEKGMPGGQ-ITGSSEIENYPGVKEVVSGLDFMQPWQEQCFRFGLKHEMTA 80 (311)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCSSEEEECSSSTTCG-GGGCSCBCCSTTCCSCBCHHHHHHHHHHHHHTTSCEEECSC
T ss_pred ceEEEECccHHHHHHHHHHHHCCCCcEEEEcCCCCCcc-cccccccccCCCCcccCCHHHHHHHHHHHHHHcCCEEEEEE
Confidence 689999999999999999999999 9999998632110 00000000001110 00 11122222223344577777788
Q ss_pred eeeEeCCCCEEEEEeecCccccCCCceeEeeccEEEEecCCCcCCCCCCCcccc---ccccCCHHHHHHHHHHHHHhhhc
Q 018704 140 CAGIDTDNHVVHCETVTDELRTLEPWKFKISYDKLVIALGAEASTFGIHGVKEN---ATFLREVHHAQEIRRKLLLNLML 216 (351)
Q Consensus 140 v~~i~~~~~~v~~~~~~~~~~~~~~~~~~~~~d~lviAtG~~p~~p~i~g~~~~---~~~~~~~~~~~~~~~~~~~~~~~ 216 (351)
|+.++.+.+.+.+.. .++. .+.||+||+|||+.|+.|++||.++. ..+. .... ...
T Consensus 81 v~~i~~~~~~~~v~~-~~g~--------~~~~~~vv~AtG~~~~~~~~~g~~~~~~~~~~~--~~~~---~~~------- 139 (311)
T 2q0l_A 81 VQRVSKKDSHFVILA-EDGK--------TFEAKSVIIATGGSPKRTGIKGESEYWGKGVST--CATC---DGF------- 139 (311)
T ss_dssp EEEEEEETTEEEEEE-TTSC--------EEEEEEEEECCCEEECCCCCBTHHHHBTTTEES--CHHH---HGG-------
T ss_pred EEEEEEcCCEEEEEE-cCCC--------EEECCEEEECCCCCCCCCCCCChhhccCCcEEE--eecC---Chh-------
Confidence 999988777666543 4555 89999999999999999999987421 1111 1111 110
Q ss_pred cCCCCCCHhhhcccCeEEEECCChHHHHHHHHHHHHHHHHHHhhhcCCCCccEEEEEeCCCCCCCCcHHHHHHHHHHhh-
Q 018704 217 SDVPGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEILSSFDDRLRHYATTQLS- 295 (351)
Q Consensus 217 ~~~p~~~~~~~~~~~~v~VvGgG~~a~e~a~~l~~~~~~~~~~~~~~~~~~~~v~~~~~~~~l~~~~~~~~~~~~~~l~- 295 (351)
....++|+|||+|.+|+|+|..|.+.+ .+|+++++.+.+. .++. +.+.+.
T Consensus 140 ----------~~~~~~v~VvG~G~~g~e~A~~l~~~g--------------~~Vtlv~~~~~~~-~~~~----~~~~l~~ 190 (311)
T 2q0l_A 140 ----------FYKNKEVAVLGGGDTAVEEAIYLANIC--------------KKVYLIHRRDGFR-CAPI----TLEHAKN 190 (311)
T ss_dssp ----------GGTTSEEEEECCSHHHHHHHHHHHTTS--------------SEEEEECSSSSCC-SCHH----HHHHHHT
T ss_pred ----------hcCCCEEEEECCCHHHHHHHHHHHhcC--------------CEEEEEeeCCccC-CCHH----HHHHHhh
Confidence 023469999999999999999998776 8999999975443 3333 333444
Q ss_pred hcCcEEEcCe-EEEEeCC-----eEEec---CCc--EEeccEEEEecCCCCc-cccccCC----CCCCCCC
Q 018704 296 KSGVRLVRGI-VKDVDSQ-----KLILN---DGT--EVPYGLLVWSTGVGPS-TLVKSLD----LPKSPGG 350 (351)
Q Consensus 296 ~~gV~~~~~~-v~~v~~~-----~v~~~---~g~--~~~~D~vi~a~G~~p~-~~~~~~g----l~~~~~G 350 (351)
+.||+++.+. ++++..+ ++.+. +|+ ++++|.||+|+|++|+ ++++.++ ++++++|
T Consensus 191 ~~gv~v~~~~~v~~i~~~~~~v~~v~~~~~~~g~~~~i~~D~vi~a~G~~p~~~~l~~~g~~~~l~~~~~g 261 (311)
T 2q0l_A 191 NDKIEFLTPYVVEEIKGDASGVSSLSIKNTATNEKRELVVPGFFIFVGYDVNNAVLKQEDNSMLCKCDEYG 261 (311)
T ss_dssp CTTEEEETTEEEEEEEEETTEEEEEEEEETTTCCEEEEECSEEEECSCEEECCGGGBCTTSCBSSCBCTTS
T ss_pred CCCeEEEeCCEEEEEECCCCcEeEEEEEecCCCceEEEecCEEEEEecCccChhhhhcccccceeEeccCC
Confidence 4799999995 8888653 46775 675 6899999999999999 8888875 7776655
No 57
>4a5l_A Thioredoxin reductase; oxidoreductase, redox metabolism, oxidative stress; HET: NDP FAD; 1.66A {Entamoeba histolytica} PDB: 4a65_A*
Probab=99.95 E-value=7e-28 Score=218.40 Aligned_cols=243 Identities=15% Similarity=0.163 Sum_probs=156.5
Q ss_pred CCcEEEECCchhHHHHHHhhhccCceEEEEcCCCccccchh--hhhh--hcccccccc--cccchhccchhhhcCCCeEE
Q 018704 62 KPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRNHMVFTPL--LAST--CVGTLEFRS--VAEPIARIQPAISREPGSYF 135 (351)
Q Consensus 62 ~~~VvIIG~G~aGl~aA~~L~~~g~~v~vie~~~~~~~~~~--~~~~--~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~ 135 (351)
.+||+|||||||||+||.+|++.|++|+|||+.......+. ++.. ..+.+.+.. ....+...........+..+
T Consensus 4 ~yDvvIIG~GpAGl~AA~~la~~g~~v~liE~~~~gg~~~~G~~~~~~~i~~~~g~~~~i~~~~l~~~~~~~~~~~~~~~ 83 (314)
T 4a5l_A 4 IHDVVIIGSGPAAHTAAIYLGRSSLKPVMYEGFMAGGVAAGGQLTTTTIIENFPGFPNGIDGNELMMNMRTQSEKYGTTI 83 (314)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCCEEECCSSGGGCCTTCGGGGSSEECCSTTCTTCEEHHHHHHHHHHHHHHTTCEE
T ss_pred CCcEEEECCCHHHHHHHHHHHHCCCCEEEEecCCCCCcccCCCcCChHHhhhccCCcccCCHHHHHHHHHHHHhhcCcEE
Confidence 48999999999999999999999999999998754222110 0000 000011100 00112222222334446667
Q ss_pred EEEEeeeEeCCCCEEEEEeecCccccCCCceeEeeccEEEEecCCCcCCCCCCCcccc-ccccCCHHHHHHHHHHHHHhh
Q 018704 136 FLSHCAGIDTDNHVVHCETVTDELRTLEPWKFKISYDKLVIALGAEASTFGIHGVKEN-ATFLREVHHAQEIRRKLLLNL 214 (351)
Q Consensus 136 ~~~~v~~i~~~~~~v~~~~~~~~~~~~~~~~~~~~~d~lviAtG~~p~~p~i~g~~~~-~~~~~~~~~~~~~~~~~~~~~ 214 (351)
....+..+......+...+ .++. ++.||+||||||+.|+.|++||.+.. ..............
T Consensus 84 ~~~~v~~~~~~~~~~~~~~-~~~~--------~~~~~~liiATG~~~~~~~ipG~~~~~~~~~~~~~~~~~~~------- 147 (314)
T 4a5l_A 84 ITETIDHVDFSTQPFKLFT-EEGK--------EVLTKSVIIATGATAKRMHVPGEDKYWQNGVSACAICDGAV------- 147 (314)
T ss_dssp ECCCEEEEECSSSSEEEEE-TTCC--------EEEEEEEEECCCEEECCCCCTTHHHHBTTTEESCHHHHTTS-------
T ss_pred EEeEEEEeecCCCceEEEE-CCCe--------EEEEeEEEEcccccccccCCCccccccccceeeehhhhhhh-------
Confidence 6777777777666555433 3454 89999999999999999999998632 12222222111100
Q ss_pred hccCCCCCCHhhhcccCeEEEECCChHHHHHHHHHHHHHHHHHHhhhcCCCCccEEEEEeCCCCCCCCcHHHHHHHHHHh
Q 018704 215 MLSDVPGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEILSSFDDRLRHYATTQL 294 (351)
Q Consensus 215 ~~~~~p~~~~~~~~~~~~v~VvGgG~~a~e~a~~l~~~~~~~~~~~~~~~~~~~~v~~~~~~~~l~~~~~~~~~~~~~~l 294 (351)
...+.++++|||||++|+|+|..|.++| .+|++++|...... ... ...+..
T Consensus 148 -----------~~~~~~~vvViGgG~ig~e~A~~l~~~G--------------~~Vt~v~~~~~~~~-~~~---~~~~~~ 198 (314)
T 4a5l_A 148 -----------PIFRNKVLMVVGGGDAAMEEALHLTKYG--------------SKVIILHRRDAFRA-SKT---MQERVL 198 (314)
T ss_dssp -----------GGGTTSEEEEECSSHHHHHHHHHHTTTS--------------SEEEEECSSSSCCS-CHH---HHHHHH
T ss_pred -----------hhcCCCeEEEECCChHHHHHHHHHHHhC--------------Ceeeeecccccccc-cch---hhhhhh
Confidence 1134469999999999999999999887 89999998643221 122 233445
Q ss_pred hhcCcEEEcCe-EEEEeC-----CeEEe-----cCCcEEeccEEEEecCCCCc-cccccCCCCCCCCC
Q 018704 295 SKSGVRLVRGI-VKDVDS-----QKLIL-----NDGTEVPYGLLVWSTGVGPS-TLVKSLDLPKSPGG 350 (351)
Q Consensus 295 ~~~gV~~~~~~-v~~v~~-----~~v~~-----~~g~~~~~D~vi~a~G~~p~-~~~~~~gl~~~~~G 350 (351)
...+++.+... +.++.. +++.+ .+++++++|.|++|+|++|+ ++++. +++++++|
T Consensus 199 ~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~i~~d~vi~a~G~~pn~~~l~~-~~~~~~~G 265 (314)
T 4a5l_A 199 NHPKIEVIWNSELVELEGDGDLLNGAKIHNLVSGEYKVVPVAGLFYAIGHSPNSKFLGG-QVKTADDG 265 (314)
T ss_dssp TCTTEEEECSEEEEEEEESSSSEEEEEEEETTTCCEEEEECSEEEECSCEEESCGGGTT-SSCBCTTS
T ss_pred cccceeeEeeeeeEEEEeeeeccceeEEeecccccceeeccccceEecccccChhHhcc-cceEcCCe
Confidence 56678888774 666543 23333 24567999999999999999 77653 56666665
No 58
>2yqu_A 2-oxoglutarate dehydrogenase E3 component; lipoamide dehydrogenase, 2-oxoglutarate dehydrogenase comple pyruvate dehydrogenase complex; HET: FAD; 1.70A {Thermus thermophilus} PDB: 2eq7_A*
Probab=99.95 E-value=5.8e-28 Score=230.35 Aligned_cols=239 Identities=18% Similarity=0.190 Sum_probs=167.8
Q ss_pred CcEEEECCchhHHHHHHhhhccCceEEEEcCCCccccchh----hhh------------h---hcccc------cccccc
Q 018704 63 PRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRNHMVFTPL----LAS------------T---CVGTL------EFRSVA 117 (351)
Q Consensus 63 ~~VvIIG~G~aGl~aA~~L~~~g~~v~vie~~~~~~~~~~----~~~------------~---~~~~~------~~~~~~ 117 (351)
+||+|||||+||+++|..|++.|++|+|||+++.+..... .+. . ..+.. ++..+.
T Consensus 2 ~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~~~~GG~~~~~g~~p~k~l~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 81 (455)
T 2yqu_A 2 YDLLVIGAGPGGYVAAIRAAQLGMKVGVVEKEKALGGTCLRVGCIPSKALLETTERIYEAKKGLLGAKVKGVELDLPALM 81 (455)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSSSHHHHHHSHHHHHHHHHHHHHHHHHHHCCTTEEECCEEECHHHHH
T ss_pred CCEEEECCChhHHHHHHHHHHCCCeEEEEeCCCCCCCccceecchhHHHHHHHHHHHHHHhhhcCCcccCCCccCHHHHH
Confidence 6999999999999999999999999999999865421100 000 0 00110 000000
Q ss_pred cc-------hhccchhhhcCCCeEEEEEEeeeEeCCCCEEEEEeecCccccCCCceeEeeccEEEEecCCCcCCCCCCCc
Q 018704 118 EP-------IARIQPAISREPGSYFFLSHCAGIDTDNHVVHCETVTDELRTLEPWKFKISYDKLVIALGAEASTFGIHGV 190 (351)
Q Consensus 118 ~~-------~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~v~~~~~~~~~~~~~~~~~~~~~d~lviAtG~~p~~p~i~g~ 190 (351)
.. +...........++.++...+..+ +.+.+.+.. ++. .+.||+||+|||+.|..|+++|.
T Consensus 82 ~~~~~~~~~l~~~~~~~~~~~~v~~~~g~~~~i--~~~~~~v~~--~g~--------~~~~d~lviAtG~~p~~~~~~g~ 149 (455)
T 2yqu_A 82 AHKDKVVQANTQGVEFLFKKNGIARHQGTARFL--SERKVLVEE--TGE--------ELEARYILIATGSAPLIPPWAQV 149 (455)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTCEEEESCEEES--SSSEEEETT--TCC--------EEEEEEEEECCCEEECCCTTBCC
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCEEEEeEEEEe--cCCeEEEee--CCE--------EEEecEEEECCCCCCCCCCCCCC
Confidence 00 000011122234677777665544 345666533 344 89999999999999999988886
Q ss_pred cc-cccccCCHHHHHHHHHHHHHhhhccCCCCCCHhhhcccCeEEEECCChHHHHHHHHHHHHHHHHHHhhhcCCCCccE
Q 018704 191 KE-NATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIH 269 (351)
Q Consensus 191 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~v~VvGgG~~a~e~a~~l~~~~~~~~~~~~~~~~~~~~ 269 (351)
+. .+++ ..+. +.+... .++++|||||.+|+|+|..|.+++ .+
T Consensus 150 ~~~~v~~---~~~~----------~~~~~~----------~~~vvIiGgG~~g~e~A~~l~~~g--------------~~ 192 (455)
T 2yqu_A 150 DYERVVT---STEA----------LSFPEV----------PKRLIVVGGGVIGLELGVVWHRLG--------------AE 192 (455)
T ss_dssp CSSSEEC---HHHH----------TCCSSC----------CSEEEEECCSHHHHHHHHHHHHTT--------------CE
T ss_pred CcCcEec---hHHh----------hccccC----------CCeEEEECCCHHHHHHHHHHHHcC--------------CE
Confidence 53 2222 2221 111122 359999999999999999999877 89
Q ss_pred EEEEeCC-CCCCCCcHHHHHHHHHHhhhcCcEEEcCe-EEEEeC--Ce--EEecCCcEEeccEEEEecCCCCc-cc--cc
Q 018704 270 VTLIEAN-EILSSFDDRLRHYATTQLSKSGVRLVRGI-VKDVDS--QK--LILNDGTEVPYGLLVWSTGVGPS-TL--VK 340 (351)
Q Consensus 270 v~~~~~~-~~l~~~~~~~~~~~~~~l~~~gV~~~~~~-v~~v~~--~~--v~~~~g~~~~~D~vi~a~G~~p~-~~--~~ 340 (351)
|+++++. .+++.+++++.+.+.+.+++.||+++.+. |++++. ++ +.+.+|+++++|.||+|+|.+|+ ++ ++
T Consensus 193 V~lv~~~~~~l~~~~~~~~~~l~~~l~~~Gv~i~~~~~V~~i~~~~~~v~v~~~~g~~i~~D~vv~A~G~~p~~~~l~~~ 272 (455)
T 2yqu_A 193 VIVLEYMDRILPTMDLEVSRAAERVFKKQGLTIRTGVRVTAVVPEAKGARVELEGGEVLEADRVLVAVGRRPYTEGLSLE 272 (455)
T ss_dssp EEEECSSSSSCTTSCHHHHHHHHHHHHHHTCEEECSCCEEEEEEETTEEEEEETTSCEEEESEEEECSCEEECCTTCCGG
T ss_pred EEEEecCCccccccCHHHHHHHHHHHHHCCCEEEECCEEEEEEEeCCEEEEEECCCeEEEcCEEEECcCCCcCCCCCChh
Confidence 9999997 46788899999999999999999999994 988864 33 44568889999999999999999 55 67
Q ss_pred cCCCCCCCCC
Q 018704 341 SLDLPKSPGG 350 (351)
Q Consensus 341 ~~gl~~~~~G 350 (351)
.+|++++++|
T Consensus 273 ~~g~~~~~~g 282 (455)
T 2yqu_A 273 NAGLSTDERG 282 (455)
T ss_dssp GGTCCCCTTS
T ss_pred hcCCccCCCC
Confidence 7788877655
No 59
>3lad_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD; 2.20A {Azotobacter vinelandii} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1lpf_A*
Probab=99.95 E-value=1.3e-27 Score=229.26 Aligned_cols=244 Identities=19% Similarity=0.244 Sum_probs=167.7
Q ss_pred CCCcEEEECCchhHHHHHHhhhccCceEEEEcCCCccccchhhhhhhc---------------------------cccc-
Q 018704 61 EKPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRNHMVFTPLLASTCV---------------------------GTLE- 112 (351)
Q Consensus 61 ~~~~VvIIG~G~aGl~aA~~L~~~g~~v~vie~~~~~~~~~~~~~~~~---------------------------~~~~- 112 (351)
+++||+|||||++|+++|+.|++.|++|+|||+++.......+.+.|. +...
T Consensus 2 ~~~DVvVIGgG~aGl~aA~~la~~G~~V~liEk~~~~gG~~~~GG~~~~~gciPsk~l~~~~~~~~~~~~~~~~~g~~~~ 81 (476)
T 3lad_A 2 QKFDVIVIGAGPGGYVAAIKSAQLGLKTALIEKYKGKEGKTALGGTCLNVGCIPSKALLDSSYKFHEAHESFKLHGISTG 81 (476)
T ss_dssp CCCSEEEECCSHHHHHHHHHHHHHTCCEEEEECCBCTTSSBCCSHHHHHHSHHHHHHHHHHHHHHHHHHTTSGGGTEECS
T ss_pred CcCCEEEECcCHHHHHHHHHHHhCCCEEEEEeCCCccCCCCCcCCccccccHHHHHHHHHHHHHHHHHHHHHHhcCcccC
Confidence 358999999999999999999999999999999862211100111110 0000
Q ss_pred --ccccc----------cchhccchhhhcCCCeEEEEEEeeeEeCCCCEEEEEeecCccccCCCceeEeeccEEEEecCC
Q 018704 113 --FRSVA----------EPIARIQPAISREPGSYFFLSHCAGIDTDNHVVHCETVTDELRTLEPWKFKISYDKLVIALGA 180 (351)
Q Consensus 113 --~~~~~----------~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~v~~~~~~~~~~~~~~~~~~~~~d~lviAtG~ 180 (351)
..++. ..+......+....++.++...+..++. +.+.+.. .++. ...+.||+||||||+
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~g~~~~~~~--~~~~v~~-~~g~------~~~~~~d~lvlAtG~ 152 (476)
T 3lad_A 82 EVAIDVPTMIARKDQIVRNLTGGVASLIKANGVTLFEGHGKLLAG--KKVEVTA-ADGS------SQVLDTENVILASGS 152 (476)
T ss_dssp CCEECHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEESEEEECST--TCEEEEC-TTSC------EEEECCSCEEECCCE
T ss_pred CCccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeEEEEecC--CEEEEEc-CCCc------eEEEEcCEEEEcCCC
Confidence 00000 0000111122233467888877776554 3444432 3332 237999999999999
Q ss_pred CcCCCCCCCcc-ccccccCCHHHHHHHHHHHHHhhhccCCCCCCHhhhcccCeEEEECCChHHHHHHHHHHHHHHHHHHh
Q 018704 181 EASTFGIHGVK-ENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQ 259 (351)
Q Consensus 181 ~p~~p~i~g~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~v~VvGgG~~a~e~a~~l~~~~~~~~~~ 259 (351)
.|..|+.++.+ ..+++. .+. +.+... .++++|||+|++|+|+|..|.+++
T Consensus 153 ~p~~~~~~~~~~~~v~~~---~~~----------~~~~~~----------~~~v~ViGgG~~g~e~A~~l~~~g------ 203 (476)
T 3lad_A 153 KPVEIPPAPVDQDVIVDS---TGA----------LDFQNV----------PGKLGVIGAGVIGLELGSVWARLG------ 203 (476)
T ss_dssp EECCCTTSCCCSSSEEEH---HHH----------TSCSSC----------CSEEEEECCSHHHHHHHHHHHHTT------
T ss_pred CCCCCCCCCCCcccEEec---hhh----------hccccC----------CCeEEEECCCHHHHHHHHHHHHcC------
Confidence 98877555543 223322 111 112222 359999999999999999999887
Q ss_pred hhcCCCCccEEEEEeCC-CCCCCCcHHHHHHHHHHhhhcCcEEEcCe-EEEEeCC----eEEecCC---cEEeccEEEEe
Q 018704 260 RYSHVKDYIHVTLIEAN-EILSSFDDRLRHYATTQLSKSGVRLVRGI-VKDVDSQ----KLILNDG---TEVPYGLLVWS 330 (351)
Q Consensus 260 ~~~~~~~~~~v~~~~~~-~~l~~~~~~~~~~~~~~l~~~gV~~~~~~-v~~v~~~----~v~~~~g---~~~~~D~vi~a 330 (351)
.+|+++++. .+++.+++++.+.+.+.+++.||+++.+. |++++.+ .+.+.++ +++++|.||+|
T Consensus 204 --------~~Vtlv~~~~~~l~~~~~~~~~~l~~~l~~~Gv~v~~~~~v~~i~~~~~~~~v~~~~~~g~~~~~~D~vi~a 275 (476)
T 3lad_A 204 --------AEVTVLEAMDKFLPAVDEQVAKEAQKILTKQGLKILLGARVTGTEVKNKQVTVKFVDAEGEKSQAFDKLIVA 275 (476)
T ss_dssp --------CEEEEEESSSSSSTTSCHHHHHHHHHHHHHTTEEEEETCEEEEEEECSSCEEEEEESSSEEEEEEESEEEEC
T ss_pred --------CcEEEEecCCCcCcccCHHHHHHHHHHHHhCCCEEEECCEEEEEEEcCCEEEEEEEeCCCcEEEECCEEEEe
Confidence 899999997 57888999999999999999999999994 8888742 3566654 67999999999
Q ss_pred cCCCCc-c--ccccCCCCCCCCC
Q 018704 331 TGVGPS-T--LVKSLDLPKSPGG 350 (351)
Q Consensus 331 ~G~~p~-~--~~~~~gl~~~~~G 350 (351)
+|++|+ + .++.+|++++++|
T Consensus 276 ~G~~p~~~~l~~~~~g~~~~~~G 298 (476)
T 3lad_A 276 VGRRPVTTDLLAADSGVTLDERG 298 (476)
T ss_dssp SCEEECCTTCCSSCCSCCBCTTS
T ss_pred eCCcccCCCCCccccCccccCCC
Confidence 999999 4 3677888887766
No 60
>2xve_A Flavin-containing monooxygenase; oxidoreductase; HET: FAD; 1.99A {Methylophaga aminisulfidivorans} PDB: 2xvf_A* 2xvh_A* 2xvi_A* 2xvj_A* 2xlt_A* 2vqb_A* 2vq7_A* 2xlu_A* 2xlp_A* 2xls_A* 2xlr_A*
Probab=99.95 E-value=8.2e-28 Score=229.56 Aligned_cols=233 Identities=12% Similarity=0.130 Sum_probs=156.8
Q ss_pred CcEEEECCchhHHHHHHhhhc---cCce---EEEEcCCCccccchhhh------------------hhhcc----ccccc
Q 018704 63 PRVVVLGSGWAGCRLMKGIDT---SLYD---VVCVSPRNHMVFTPLLA------------------STCVG----TLEFR 114 (351)
Q Consensus 63 ~~VvIIG~G~aGl~aA~~L~~---~g~~---v~vie~~~~~~~~~~~~------------------~~~~~----~~~~~ 114 (351)
+||+|||||++||++|..|++ .|++ |+|||+++......... ..... ...+.
T Consensus 3 ~~V~IIGaG~aGl~aA~~L~~~~~~G~~~~~V~v~E~~~~~GG~w~~~~~~g~~~~g~~~~~~~y~~l~~~~~~~~~~~~ 82 (464)
T 2xve_A 3 TRIAILGAGPSGMAQLRAFQSAQEKGAEIPELVCFEKQADWGGQWNYTWRTGLDENGEPVHSSMYRYLWSNGPKECLEFA 82 (464)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHHHTTCCCCEEEEECSSSSSCGGGSCCSCCSBCTTSSBCCCCCCTTCBCSSCGGGTCBT
T ss_pred CcEEEECccHHHHHHHHHHHhhhhcCCCCCcEEEEEcCCCCCCEeecCCCCCccccCCCCcCccccchhhcCChhhcccC
Confidence 699999999999999999999 9999 99999986542111000 00000 00000
Q ss_pred cc---------------ccchhccchhhhcCCCe---EEEEEEeeeEeCCCC--EEEEEeec--CccccCCCceeEeecc
Q 018704 115 SV---------------AEPIARIQPAISREPGS---YFFLSHCAGIDTDNH--VVHCETVT--DELRTLEPWKFKISYD 172 (351)
Q Consensus 115 ~~---------------~~~~~~~~~~~~~~~~~---~~~~~~v~~i~~~~~--~v~~~~~~--~~~~~~~~~~~~~~~d 172 (351)
.+ ...+.++...+....++ ..+..+|+.++...+ .|.++..+ ++. ..++.||
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~gv~~~i~~~~~V~~v~~~~~~~~~~V~~~~~~~g~------~~~~~~d 156 (464)
T 2xve_A 83 DYTFDEHFGKPIASYPPREVLWDYIKGRVEKAGVRKYIRFNTAVRHVEFNEDSQTFTVTVQDHTTDT------IYSEEFD 156 (464)
T ss_dssp TBCHHHHHSSCCCSSCBHHHHHHHHHHHHHHHTCGGGEECSEEEEEEEEETTTTEEEEEEEETTTTE------EEEEEES
T ss_pred CCCCCcccCCCCCCCCCHHHHHHHHHHHHHHcCCcceEEeCCEEEEEEEcCCCCcEEEEEEEcCCCc------eEEEEcC
Confidence 00 01111111112222233 344678888886654 55544322 231 1378999
Q ss_pred EEEEecC--CCcCCCCCCCcccc---ccccCCHHHHHHHHHHHHHhhhccCCCCCCHhhhcccCeEEEECCChHHHHHHH
Q 018704 173 KLVIALG--AEASTFGIHGVKEN---ATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEKSRLLHCVVVGGGPTGVEFSG 247 (351)
Q Consensus 173 ~lviAtG--~~p~~p~i~g~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~v~VvGgG~~a~e~a~ 247 (351)
+||+||| +.|+.|.+||.+.. .++...+.+.. ...+|+|+|||+|++|+|+|.
T Consensus 157 ~VVvAtG~~s~p~~p~ipG~~~~~g~~~hs~~~~~~~----------------------~~~~k~VvVVG~G~sg~eiA~ 214 (464)
T 2xve_A 157 YVVCCTGHFSTPYVPEFEGFEKFGGRILHAHDFRDAL----------------------EFKDKTVLLVGSSYSAEDIGS 214 (464)
T ss_dssp EEEECCCSSSSBCCCCCBTTTTCCSEEEEGGGCCCGG----------------------GGTTSEEEEECCSTTHHHHHH
T ss_pred EEEECCCCCCCCccCCCCCcccCCceEEehhhhCCHh----------------------HcCCCEEEEEcCCCCHHHHHH
Confidence 9999999 78999999997531 33333222111 123469999999999999999
Q ss_pred HHHHHHHHHHHhhhcCCCCccEEEEEeCCC-CCCCCcHHHHHHHHHHhhhcCcEEEcCeEEEEeCCeEEecCCcEEeccE
Q 018704 248 ELSDFIMRDVRQRYSHVKDYIHVTLIEANE-ILSSFDDRLRHYATTQLSKSGVRLVRGIVKDVDSQKLILNDGTEVPYGL 326 (351)
Q Consensus 248 ~l~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~l~~~~~~~~~~~~~~l~~~gV~~~~~~v~~v~~~~v~~~~g~~~~~D~ 326 (351)
.|.+.+ .+|+++++.. +++.. ...||+++ ..|+++++++|++.||+++++|.
T Consensus 215 ~l~~~g--------------~~V~li~~~~~~~~~~------------~~~~V~~~-~~V~~i~~~~V~~~dG~~i~~D~ 267 (464)
T 2xve_A 215 QCYKYG--------------AKKLISCYRTAPMGYK------------WPENWDER-PNLVRVDTENAYFADGSSEKVDA 267 (464)
T ss_dssp HHHHTT--------------CSEEEEECSSCCCCCC------------CCTTEEEC-SCEEEECSSEEEETTSCEEECSE
T ss_pred HHHHhC--------------CeEEEEEECCCCCCCC------------CCCceEEc-CCeEEEeCCEEEECCCCEEeCCE
Confidence 999887 8999999864 33321 02478887 56999988999999999999999
Q ss_pred EEEecCCCCc-ccccc-CCCCCCCCC
Q 018704 327 LVWSTGVGPS-TLVKS-LDLPKSPGG 350 (351)
Q Consensus 327 vi~a~G~~p~-~~~~~-~gl~~~~~G 350 (351)
||+|||++|+ +|+.. +|++++++|
T Consensus 268 Vi~atG~~p~~~~l~~~~gl~~~~~~ 293 (464)
T 2xve_A 268 IILCTGYIHHFPFLNDDLRLVTNNRL 293 (464)
T ss_dssp EEECCCBCCCCTTBCTTTCCCCCSSS
T ss_pred EEECCCCCCCCCCcCcccccccCCCc
Confidence 9999999999 88876 688876653
No 61
>3urh_A Dihydrolipoyl dehydrogenase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium; HET: FAD; 1.90A {Sinorhizobium meliloti}
Probab=99.95 E-value=1.9e-27 Score=228.85 Aligned_cols=245 Identities=21% Similarity=0.220 Sum_probs=165.3
Q ss_pred CCCcEEEECCchhHHHHHHhhhccCceEEEEcCCCccccchhhh----h-----------------hhccccc---cccc
Q 018704 61 EKPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRNHMVFTPLLA----S-----------------TCVGTLE---FRSV 116 (351)
Q Consensus 61 ~~~~VvIIG~G~aGl~aA~~L~~~g~~v~vie~~~~~~~~~~~~----~-----------------~~~~~~~---~~~~ 116 (351)
+++||+|||||+||++||..|++.|++|+|||+++.+....... . ...+... ..++
T Consensus 24 ~~~dVvVIGgG~aGl~aA~~la~~G~~V~liEk~~~~GG~~~~~gciP~k~l~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 103 (491)
T 3urh_A 24 MAYDLIVIGSGPGGYVCAIKAAQLGMKVAVVEKRSTYGGTCLNVGCIPSKALLHASEMFHQAQHGLEALGVEVANPKLNL 103 (491)
T ss_dssp --CCEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSSSHHHHHHSHHHHHHHHHHHHHHHHHHHSSGGGTEECCCCEECH
T ss_pred ccCCEEEECCCHHHHHHHHHHHHCCCeEEEEecCCCCCCccccccchhhHHHHHHHHHHHHHHhhHhhcCcccCCCccCH
Confidence 45899999999999999999999999999999876543211000 0 0000000 0000
Q ss_pred cc----------chhccchhhhcCCCeEEEEEEeeeEeCCCCEEEEEeecCccccCCCceeEeeccEEEEecCCCcCCCC
Q 018704 117 AE----------PIARIQPAISREPGSYFFLSHCAGIDTDNHVVHCETVTDELRTLEPWKFKISYDKLVIALGAEASTFG 186 (351)
Q Consensus 117 ~~----------~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~v~~~~~~~~~~~~~~~~~~~~~d~lviAtG~~p~~p~ 186 (351)
.. .+...........++.++...+..++ .+.+.+.. .++. ...+.||+||||||+.| +.
T Consensus 104 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~g~~~~~~--~~~~~v~~-~~g~------~~~~~~d~lViATGs~p--~~ 172 (491)
T 3urh_A 104 QKMMAHKDATVKSNVDGVSFLFKKNKIDGFQGTGKVLG--QGKVSVTN-EKGE------EQVLEAKNVVIATGSDV--AG 172 (491)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTTCEEEESEEEECS--SSEEEEEC-TTSC------EEEEECSEEEECCCEEC--CC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEEEEEEec--CCEEEEEe-CCCc------eEEEEeCEEEEccCCCC--CC
Confidence 00 00011112233456778777766554 45555543 3332 23899999999999885 45
Q ss_pred CCCccc--cccccCCHHHHHHHHHHHHHhhhccCCCCCCHhhhcccCeEEEECCChHHHHHHHHHHHHHHHHHHhhhcCC
Q 018704 187 IHGVKE--NATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHV 264 (351)
Q Consensus 187 i~g~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~v~VvGgG~~a~e~a~~l~~~~~~~~~~~~~~~ 264 (351)
+||.++ ....+.+..+. +.+... .++++|||||.+|+|+|..|.+++
T Consensus 173 ipg~~~~~~~~~~~~~~~~----------~~~~~~----------~~~vvViGgG~~g~E~A~~l~~~g----------- 221 (491)
T 3urh_A 173 IPGVEVAFDEKTIVSSTGA----------LALEKV----------PASMIVVGGGVIGLELGSVWARLG----------- 221 (491)
T ss_dssp BTTBCCCCCSSSEECHHHH----------TSCSSC----------CSEEEEECCSHHHHHHHHHHHHHT-----------
T ss_pred CCCcccccCCeeEEehhHh----------hhhhhc----------CCeEEEECCCHHHHHHHHHHHHcC-----------
Confidence 676631 11112222221 112222 359999999999999999999887
Q ss_pred CCccEEEEEeCC-CCCCCCcHHHHHHHHHHhhhcCcEEEcCe-EEEEeC--C--eEEecC---C--cEEeccEEEEecCC
Q 018704 265 KDYIHVTLIEAN-EILSSFDDRLRHYATTQLSKSGVRLVRGI-VKDVDS--Q--KLILND---G--TEVPYGLLVWSTGV 333 (351)
Q Consensus 265 ~~~~~v~~~~~~-~~l~~~~~~~~~~~~~~l~~~gV~~~~~~-v~~v~~--~--~v~~~~---g--~~~~~D~vi~a~G~ 333 (351)
.+|+++++. .+++.+++++.+.+.+.+++.||+++.+. |.+++. + .+.+.+ | +++++|.||+|+|+
T Consensus 222 ---~~Vtlv~~~~~~l~~~d~~~~~~l~~~l~~~gV~v~~~~~v~~i~~~~~~~~v~~~~~~~g~~~~i~~D~Vi~a~G~ 298 (491)
T 3urh_A 222 ---AKVTVVEFLDTILGGMDGEVAKQLQRMLTKQGIDFKLGAKVTGAVKSGDGAKVTFEPVKGGEATTLDAEVVLIATGR 298 (491)
T ss_dssp ---CEEEEECSSSSSSSSSCHHHHHHHHHHHHHTTCEEECSEEEEEEEEETTEEEEEEEETTSCCCEEEEESEEEECCCC
T ss_pred ---CEEEEEeccccccccCCHHHHHHHHHHHHhCCCEEEECCeEEEEEEeCCEEEEEEEecCCCceEEEEcCEEEEeeCC
Confidence 899999997 57888999999999999999999999994 888864 3 255542 5 57999999999999
Q ss_pred CCc-cc--cccCCCCCCCCC
Q 018704 334 GPS-TL--VKSLDLPKSPGG 350 (351)
Q Consensus 334 ~p~-~~--~~~~gl~~~~~G 350 (351)
+|+ ++ ++.+|++++++|
T Consensus 299 ~p~~~~l~l~~~g~~~~~~G 318 (491)
T 3urh_A 299 KPSTDGLGLAKAGVVLDSRG 318 (491)
T ss_dssp EECCTTSCHHHHTCCBCTTS
T ss_pred ccCCCccCchhcCceECCCC
Confidence 999 55 567788877766
No 62
>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni}
Probab=99.95 E-value=7.8e-28 Score=217.92 Aligned_cols=242 Identities=14% Similarity=0.068 Sum_probs=160.3
Q ss_pred CCCcEEEECCchhHHHHHHhhhccCceEEE-EcCCCccccchhhhhhhccccccc--ccccchhccchhhhcCCCeEEEE
Q 018704 61 EKPRVVVLGSGWAGCRLMKGIDTSLYDVVC-VSPRNHMVFTPLLASTCVGTLEFR--SVAEPIARIQPAISREPGSYFFL 137 (351)
Q Consensus 61 ~~~~VvIIG~G~aGl~aA~~L~~~g~~v~v-ie~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~ 137 (351)
.++||+|||||+|||++|..|++.|++|+| +|+.. ..............+.+. .....+...........++.++.
T Consensus 3 ~~~~vvIIG~G~aGl~aA~~l~~~g~~v~li~e~~~-~gG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 81 (315)
T 3r9u_A 3 AMLDVAIIGGGPAGLSAGLYATRGGLKNVVMFEKGM-PGGQITSSSEIENYPGVAQVMDGISFMAPWSEQCMRFGLKHEM 81 (315)
T ss_dssp SCEEEEEECCSHHHHHHHHHHHHHTCSCEEEECSSS-TTGGGGGCSCBCCSTTCCSCBCHHHHHHHHHHHHTTTCCEEEC
T ss_pred CCceEEEECCCHHHHHHHHHHHHCCCCeEEEEeCCC-CCceeeeeceeccCCCCCCCCCHHHHHHHHHHHHHHcCcEEEE
Confidence 457999999999999999999999999999 99843 211100000000011111 01122233333344555778877
Q ss_pred EEeeeEeCCC--CEEEEEeecCccccCCCceeEeeccEEEEecCCCcCCCCCCCccccccccCCHHHHHHHHHHHHHhhh
Q 018704 138 SHCAGIDTDN--HVVHCETVTDELRTLEPWKFKISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLM 215 (351)
Q Consensus 138 ~~v~~i~~~~--~~v~~~~~~~~~~~~~~~~~~~~~d~lviAtG~~p~~p~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 215 (351)
.+|..+ .+. +.+.+. ...+. .+.||+||+|||..|+.|.+||.+... ...+.........
T Consensus 82 ~~v~~i-~~~~~~~~~v~-~~~~~--------~~~~d~lvlAtG~~~~~~~~~g~~~~~--~~~~~~~~~~~~~------ 143 (315)
T 3r9u_A 82 VGVEQI-LKNSDGSFTIK-LEGGK--------TELAKAVIVCTGSAPKKAGFKGEDEFF--GKGVSTCATCDGF------ 143 (315)
T ss_dssp CCEEEE-EECTTSCEEEE-ETTSC--------EEEEEEEEECCCEEECCCCCBTTTTTB--TTTEESCHHHHGG------
T ss_pred EEEEEE-ecCCCCcEEEE-EecCC--------EEEeCEEEEeeCCCCCCCCCCChhhcC--CCeEEeeeccccc------
Confidence 788888 554 556521 12232 789999999999999999999975311 0111111111111
Q ss_pred ccCCCCCCHhhhcccCeEEEECCChHHHHHHHHHHHHHHHHHHhhhcCCCCccEEEEEeCCCCCCCCcHHHHHHHHHHhh
Q 018704 216 LSDVPGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEILSSFDDRLRHYATTQLS 295 (351)
Q Consensus 216 ~~~~p~~~~~~~~~~~~v~VvGgG~~a~e~a~~l~~~~~~~~~~~~~~~~~~~~v~~~~~~~~l~~~~~~~~~~~~~~l~ 295 (351)
....++++|||+|.+|+|+|..|.+.+ .+|+++++.+.+.. ++. .+.+.++
T Consensus 144 -----------~~~~~~v~viG~g~~~~e~a~~l~~~g--------------~~v~~~~~~~~~~~-~~~---~~~~~~~ 194 (315)
T 3r9u_A 144 -----------FYKNKEVAVLGGGDTALEEALYLANIC--------------SKIYLIHRRDEFRA-APS---TVEKVKK 194 (315)
T ss_dssp -----------GGTTSEEEEECCBHHHHHHHHHHHTTS--------------SEEEEECSSSSCBS-CHH---HHHHHHH
T ss_pred -----------ccCcCEEEEECCCHHHHHHHHHHHhhC--------------CEEEEEEeCCCCCC-CHH---HHHHHHh
Confidence 023469999999999999999998776 89999999864432 233 2344556
Q ss_pred hcCcEEEcCe-EEEEeCC-----eEEec--CCc--EEeccEEEEecCCCCc-ccccc---CC-CCCCCCC
Q 018704 296 KSGVRLVRGI-VKDVDSQ-----KLILN--DGT--EVPYGLLVWSTGVGPS-TLVKS---LD-LPKSPGG 350 (351)
Q Consensus 296 ~~gV~~~~~~-v~~v~~~-----~v~~~--~g~--~~~~D~vi~a~G~~p~-~~~~~---~g-l~~~~~G 350 (351)
+.||+++.+. |+++..+ ++++. +|+ ++++|.||+|+|++|+ .+++. +| ++++++|
T Consensus 195 ~~gv~~~~~~~v~~i~~~~~~~~~v~~~~~~g~~~~~~~D~vv~a~G~~p~~~~~~~~~~~g~l~~~~~g 264 (315)
T 3r9u_A 195 NEKIELITSASVDEVYGDKMGVAGVKVKLKDGSIRDLNVPGIFTFVGLNVRNEILKQDDSKFLCNMEEGG 264 (315)
T ss_dssp CTTEEEECSCEEEEEEEETTEEEEEEEECTTSCEEEECCSCEEECSCEEECCGGGBCTTSCBSSCBCTTS
T ss_pred cCCeEEEeCcEEEEEEcCCCcEEEEEEEcCCCCeEEeecCeEEEEEcCCCCchhhhcccccceeeecCCC
Confidence 8899999994 8888653 36665 775 7899999999999999 66665 55 8777665
No 63
>2eq6_A Pyruvate dehydrogenase complex, dihydrolipoamide dehydrogenase E3 component; oxidoreductase, homodimer, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2eq8_A* 2eq9_A*
Probab=99.95 E-value=1.2e-27 Score=228.58 Aligned_cols=238 Identities=17% Similarity=0.179 Sum_probs=165.3
Q ss_pred CCcEEEECCchhHHHHHHhhhccCceEEEEcCCCcccc---chhhhh----------------hhccccc--ccccccch
Q 018704 62 KPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRNHMVF---TPLLAS----------------TCVGTLE--FRSVAEPI 120 (351)
Q Consensus 62 ~~~VvIIG~G~aGl~aA~~L~~~g~~v~vie~~~~~~~---~~~~~~----------------~~~~~~~--~~~~~~~~ 120 (351)
++||+|||||+||+++|..|++.|++|+|||+++.... ....+. ...+... ..++...+
T Consensus 6 ~~dvvIIG~G~aG~~aA~~l~~~g~~V~lie~~~~GG~~~~~g~iP~k~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 85 (464)
T 2eq6_A 6 TYDLIVIGTGPGGYHAAIRAAQLGLKVLAVEAGEVGGVCLNVGCIPTKALLHAAETLHHLKVAEGFGLKAKPELDLKKLG 85 (464)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSCTTHHHHHTSHHHHHHHHHHHHHHHHHHHHGGGTEECCCEECHHHHH
T ss_pred cCCEEEECcCHHHHHHHHHHHHCCCeEEEEeCCCCCCCCCCcChHHHHHHHHHHHHHHHHHhHHhcCCCCCCCcCHHHHH
Confidence 47999999999999999999999999999999862100 000000 0001100 00010000
Q ss_pred h----------ccchhhhcCCCeEEEEEEeeeEeCCCCEEEEEeecCccccCCCceeEeeccEEEEecCCCcCCCC-CCC
Q 018704 121 A----------RIQPAISREPGSYFFLSHCAGIDTDNHVVHCETVTDELRTLEPWKFKISYDKLVIALGAEASTFG-IHG 189 (351)
Q Consensus 121 ~----------~~~~~~~~~~~~~~~~~~v~~i~~~~~~v~~~~~~~~~~~~~~~~~~~~~d~lviAtG~~p~~p~-i~g 189 (351)
. ..........++.++...+..++ .+.+.+. ++ ++.||+||||||+.|+.|+ +++
T Consensus 86 ~~~~~~~~~l~~~~~~~~~~~gv~~~~g~~~~~~--~~~v~v~----g~--------~~~~d~lViATGs~p~~p~gi~~ 151 (464)
T 2eq6_A 86 GWRDQVVKKLTGGVGTLLKGNGVELLRGFARLVG--PKEVEVG----GE--------RYGAKSLILATGSEPLELKGFPF 151 (464)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTCEEEESCEEEEE--TTEEEET----TE--------EEEEEEEEECCCEEECCBTTBCC
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCEEEeeeEEEcc--CCEEEEc----cE--------EEEeCEEEEcCCCCCCCCCCCCC
Confidence 0 00111233457888777666665 3566552 44 7999999999999998885 776
Q ss_pred ccccccccCCHHHHHHHHHHHHHhhhccCCCCCCHhhhcccCeEEEECCChHHHHHHHHHHHHHHHHHHhhhcCCCCccE
Q 018704 190 VKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIH 269 (351)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~v~VvGgG~~a~e~a~~l~~~~~~~~~~~~~~~~~~~~ 269 (351)
. ..++ +..++..+ .. ...++++|||||.+|+|+|..|.+++ .+
T Consensus 152 ~-~~v~---~~~~~~~l----------~~---------~~~~~vvViGgG~~g~e~A~~l~~~g--------------~~ 194 (464)
T 2eq6_A 152 G-EDVW---DSTRALKV----------EE---------GLPKRLLVIGGGAVGLELGQVYRRLG--------------AE 194 (464)
T ss_dssp S-SSEE---CHHHHTCG----------GG---------CCCSEEEEECCSHHHHHHHHHHHHTT--------------CE
T ss_pred C-CcEE---cHHHHHhh----------hh---------hcCCEEEEECCCHHHHHHHHHHHHCC--------------Ce
Confidence 2 2222 33332211 11 02259999999999999999999877 89
Q ss_pred EEEEeCC-CCCCCCcHHHHHHHHHHhhhcCcEEEcCe-EEEEeC--C--eEEec-C--Cc--EEeccEEEEecCCCCc-c
Q 018704 270 VTLIEAN-EILSSFDDRLRHYATTQLSKSGVRLVRGI-VKDVDS--Q--KLILN-D--GT--EVPYGLLVWSTGVGPS-T 337 (351)
Q Consensus 270 v~~~~~~-~~l~~~~~~~~~~~~~~l~~~gV~~~~~~-v~~v~~--~--~v~~~-~--g~--~~~~D~vi~a~G~~p~-~ 337 (351)
|+++++. .+++.+++++.+.+.+.+++.||+++.+. |++++. + .+.+. + |+ ++++|.||+|+|++|+ +
T Consensus 195 Vtlv~~~~~~l~~~~~~~~~~l~~~l~~~gV~i~~~~~v~~i~~~~~~~~v~~~~~~~g~~~~i~~D~vv~a~G~~p~~~ 274 (464)
T 2eq6_A 195 VTLIEYMPEILPQGDPETAALLRRALEKEGIRVRTKTKAVGYEKKKDGLHVRLEPAEGGEGEEVVVDKVLVAVGRKPRTE 274 (464)
T ss_dssp EEEECSSSSSSTTSCHHHHHHHHHHHHHTTCEEECSEEEEEEEEETTEEEEEEEETTCCSCEEEEESEEEECSCEEESCT
T ss_pred EEEEEcCCccccccCHHHHHHHHHHHHhcCCEEEcCCEEEEEEEeCCEEEEEEeecCCCceeEEEcCEEEECCCcccCCC
Confidence 9999997 57788899999999999999999999994 988864 2 35555 6 76 7999999999999999 5
Q ss_pred c--cccCCCCCCCCC
Q 018704 338 L--VKSLDLPKSPGG 350 (351)
Q Consensus 338 ~--~~~~gl~~~~~G 350 (351)
+ ++.+|++++++|
T Consensus 275 ~l~l~~~g~~~~~~G 289 (464)
T 2eq6_A 275 GLGLEKAGVKVDERG 289 (464)
T ss_dssp TSSHHHHTCCBCTTS
T ss_pred CCChhhcCceecCCC
Confidence 4 567788776655
No 64
>3vrd_B FCCB subunit, flavocytochrome C flavin subunit; sulfide oxidation, heme C binding, FAD binding, electron TRA oxidoreductase complex; HET: HEC FAD; 1.50A {Thermochromatium tepidum} PDB: 1fcd_A*
Probab=99.95 E-value=2.8e-27 Score=222.04 Aligned_cols=249 Identities=17% Similarity=0.223 Sum_probs=184.7
Q ss_pred CCcEEEECCchhHHHHHHhhhccC--ceEEEEcCCCccccchhhhhhhcccccccccccchhccchhhhcCCCeEEEEEE
Q 018704 62 KPRVVVLGSGWAGCRLMKGIDTSL--YDVVCVSPRNHMVFTPLLASTCVGTLEFRSVAEPIARIQPAISREPGSYFFLSH 139 (351)
Q Consensus 62 ~~~VvIIG~G~aGl~aA~~L~~~g--~~v~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 139 (351)
.++|||||||+||++||.+|++.+ .+|+|||+++.+.+.|.+.....+......+...+..+. ..++.++.++
T Consensus 2 GKkVvIIG~G~AG~~aA~~L~~~~~~~~Vtlie~~~~~~~~p~~~~v~~g~~~~~~~~~~~~~~~-----~~gv~~i~~~ 76 (401)
T 3vrd_B 2 GRKVVVVGGGTGGATAAKYIKLADPSIEVTLIEPNETYYTCYMSNEVIGGDRELASLRVGYDGLR-----AHGIQVVHDS 76 (401)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSCSSEECSTTHHHHHHTSSCGGGGEECSHHHH-----HTTCEEECSC
T ss_pred cCEEEEECCcHHHHHHHHHHHhcCcCCeEEEEeCCCCCCCccCHHHHhcCCCCHHHHhhCHHHHH-----HCCCEEEEeE
Confidence 368999999999999999998854 689999999999999988887777766665544443332 2478999999
Q ss_pred eeeEeCCCCEEEEEeecCccccCCCceeEeeccEEEEecCCCcCCCCCCCcccc-----ccccCCHHHHHHHHHHHHHhh
Q 018704 140 CAGIDTDNHVVHCETVTDELRTLEPWKFKISYDKLVIALGAEASTFGIHGVKEN-----ATFLREVHHAQEIRRKLLLNL 214 (351)
Q Consensus 140 v~~i~~~~~~v~~~~~~~~~~~~~~~~~~~~~d~lviAtG~~p~~p~i~g~~~~-----~~~~~~~~~~~~~~~~~~~~~ 214 (351)
|+.||++.+.+.+ .++. ++.||+||||||+.+.++.+||.++. .+.+...+++..+++.+...
T Consensus 77 v~~id~~~~~v~~---~~g~--------~i~yd~LviAtG~~~~~~~i~G~~e~~~~~~~~~~~~~~~~~~~~~~l~~~- 144 (401)
T 3vrd_B 77 ALGIDPDKKLVKT---AGGA--------EFAYDRCVVAPGIDLLYDKIEGYSEALAAKLPHAWKAGEQTALLRRQLESM- 144 (401)
T ss_dssp EEEEETTTTEEEE---TTSC--------EEECSEEEECCCEEECGGGSBTCCSGGGGTSCCCSSCSHHHHHHHHHHHHS-
T ss_pred EEEEEccCcEEEe---cccc--------eeecceeeeccCCccccCCccCchhhcccCccceeccHHHHHHHHHHHHhc-
Confidence 9999999999876 4666 89999999999999999999998632 24466777888777766321
Q ss_pred hccCCCCCCHhhhcccCeEEEECCC-------hHHHHHHHHHHHHHHHHHHhhhcCCCCccEEEEEeCCCCC---CCCcH
Q 018704 215 MLSDVPGISEEEKSRLLHCVVVGGG-------PTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEIL---SSFDD 284 (351)
Q Consensus 215 ~~~~~p~~~~~~~~~~~~v~VvGgG-------~~a~e~a~~l~~~~~~~~~~~~~~~~~~~~v~~~~~~~~l---~~~~~ 284 (351)
.. ...+|+++| ..+.+++.+++.+. ++. ....+|+++++.+.+ +.+++
T Consensus 145 -------------~~-~~~~v~~~~~~~i~~~~a~~e~~~~~a~~~----~~~----~~~~~v~i~~~~~~~~~~~~~~~ 202 (401)
T 3vrd_B 145 -------------DD-GGVVIIAPPAPPFRCPPGPYERASQIAHYL----KAH----KSKSKVIILDNSQTFSKQAQFTK 202 (401)
T ss_dssp -------------CT-TCEEEEECCSSSCBCTTHHHHHHHHHHHHH----HHH----CTTCEEEEECSSSSCTTHHHHHH
T ss_pred -------------cc-CCcEEEecCCccEEeehHHHHHHHHHHHHH----Hhc----CCCCEEEEEcccccccccccccH
Confidence 11 234444433 34455555554322 111 233789999987533 33556
Q ss_pred HHHHHHHHHhhhcCcEEEcCe-EEEEeC----CeEEecCCcEEeccEEEEecCCCCccccccCCCCCCCCC
Q 018704 285 RLRHYATTQLSKSGVRLVRGI-VKDVDS----QKLILNDGTEVPYGLLVWSTGVGPSTLVKSLDLPKSPGG 350 (351)
Q Consensus 285 ~~~~~~~~~l~~~gV~~~~~~-v~~v~~----~~v~~~~g~~~~~D~vi~a~G~~p~~~~~~~gl~~~~~G 350 (351)
.+.+.+.+.+++.||+++.+. +..++. ..+.+.+|+++++|.|++++|.+|+++++..+|. +++|
T Consensus 203 ~~~~~~~~~l~~~gi~v~~~~~v~~v~~~~~~~~v~~~~g~~i~~D~vi~~~g~~~~~~~~~~gl~-~~~G 272 (401)
T 3vrd_B 203 GWERLYGFGTENALIEWHPGPDAAVVKTDTEAMTVETSFGETFKAAVINLIPPQRAGKIAQSASLT-NDSG 272 (401)
T ss_dssp HHHHHSCTTSTTCSEEEECTTTTCEEEEETTTTEEEETTSCEEECSEEEECCCEEECHHHHHTTCC-CTTS
T ss_pred HHHHHHHHHHHhcCcEEEeCceEEEEEecccceEEEcCCCcEEEeeEEEEecCcCCchhHhhcccc-ccCC
Confidence 666667777889999999994 655542 3788999999999999999999999888888884 5555
No 65
>2x8g_A Thioredoxin glutathione reductase; redox-active center, detoxification pathway, oxidoreductase, flavoprotein; HET: FAD PG4; 1.90A {Schistosoma mansoni} PDB: 2x8c_A* 2x8h_A* 2x99_A* 3h4k_A* 2v6o_A*
Probab=99.95 E-value=1.9e-27 Score=234.16 Aligned_cols=243 Identities=17% Similarity=0.246 Sum_probs=164.9
Q ss_pred CCCCcEEEECCchhHHHHHHhhhccCceEEEEcCC-Ccc---ccchhhhhhh--------------------------cc
Q 018704 60 NEKPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPR-NHM---VFTPLLASTC--------------------------VG 109 (351)
Q Consensus 60 ~~~~~VvIIG~G~aGl~aA~~L~~~g~~v~vie~~-~~~---~~~~~~~~~~--------------------------~~ 109 (351)
...+||+|||||||||+||.+|++.|++|+|||+. +.. .|. +.+.| .+
T Consensus 105 ~~~~dvvVIG~GpAGl~aA~~l~~~g~~v~liE~~~~~~~g~~~~--~GG~~~~~g~iP~~~l~~~~~~~~~~~~~~~~g 182 (598)
T 2x8g_A 105 KYDYDLIVIGGGSGGLAAGKEAAKYGAKTAVLDYVEPTPIGTTWG--LGGTCVNVGCIPKKLMHQAGLLSHALEDAEHFG 182 (598)
T ss_dssp SSSEEEEEECCSHHHHHHHHHHHHTTCCEEEECCCCCCTTCCCCC--TTHHHHHHSHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred cccccEEEECCCccHHHHHHHHHhCCCeEEEEeccCCcccccccc--cCceEeccCCCchHHHHHHHHHHHHHhhHHhCC
Confidence 34589999999999999999999999999999973 210 000 01100 00
Q ss_pred cc--c---ccccc---cchhccc-------hhhhcCCCeEEEEEEeeeEeCCCCEEEEEeecCccccCCCceeEeeccEE
Q 018704 110 TL--E---FRSVA---EPIARIQ-------PAISREPGSYFFLSHCAGIDTDNHVVHCETVTDELRTLEPWKFKISYDKL 174 (351)
Q Consensus 110 ~~--~---~~~~~---~~~~~~~-------~~~~~~~~~~~~~~~v~~i~~~~~~v~~~~~~~~~~~~~~~~~~~~~d~l 174 (351)
.. . ..++. ..+.... .......++.++......++. +.+.+.+ .+|+ ...+.||+|
T Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~~~~~~~~--~~v~v~~-~~g~------~~~~~~d~l 253 (598)
T 2x8g_A 183 WSLDRSKISHNWSTMVEGVQSHIGSLNWGYKVALRDNQVTYLNAKGRLISP--HEVQITD-KNQK------VSTITGNKI 253 (598)
T ss_dssp CCCCGGGCCCCHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEECSEEEEEET--TEEEEEC-TTCC------EEEEEEEEE
T ss_pred ccccCCcCccCHHHHHHHHHHHHHHHHHHHHHHHhhCCcEEEEEEEEEcCC--CEEEEEe-CCCC------eEEEEeCEE
Confidence 00 0 00000 0111000 001123467777666665654 3454433 2331 127899999
Q ss_pred EEecCCCcCCCCCCCccccccccCCHHHHHHHHHHHHHhhhccCCCCCCHhhhcccCeEEEECCChHHHHHHHHHHHHHH
Q 018704 175 VIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIM 254 (351)
Q Consensus 175 viAtG~~p~~p~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~v~VvGgG~~a~e~a~~l~~~~~ 254 (351)
|||||+.|+.|++||.++.+.+. .+. +.+...| ++++|||||++|+|+|..|.+++
T Consensus 254 viAtGs~p~~p~i~G~~~~~~~~---~~~----------~~~~~~~----------~~vvViGgG~~g~E~A~~l~~~g- 309 (598)
T 2x8g_A 254 ILATGERPKYPEIPGAVEYGITS---DDL----------FSLPYFP----------GKTLVIGASYVALECAGFLASLG- 309 (598)
T ss_dssp EECCCEEECCCSSTTHHHHCEEH---HHH----------TTCSSCC----------CSEEEECCSHHHHHHHHHHHHTT-
T ss_pred EEeCCCCCCCCCCCCcccceEcH---HHH----------hhCccCC----------CEEEEECCCHHHHHHHHHHHHcC-
Confidence 99999999999999975433221 111 1122223 48999999999999999999887
Q ss_pred HHHHhhhcCCCCccEEEEEeCCCCCCCCcHHHHHHHHHHhhhcCcEEEcCe-EEEEe--------C---CeEE----ecC
Q 018704 255 RDVRQRYSHVKDYIHVTLIEANEILSSFDDRLRHYATTQLSKSGVRLVRGI-VKDVD--------S---QKLI----LND 318 (351)
Q Consensus 255 ~~~~~~~~~~~~~~~v~~~~~~~~l~~~~~~~~~~~~~~l~~~gV~~~~~~-v~~v~--------~---~~v~----~~~ 318 (351)
.+|+++++..+++.+++++.+.+.+.+++.||+++++. +.++. . +++. +.+
T Consensus 310 -------------~~Vtlv~~~~~l~~~d~~~~~~~~~~l~~~gv~i~~~~~v~~v~~~~~~~~~~~~~~~~~v~~~~~~ 376 (598)
T 2x8g_A 310 -------------GDVTVMVRSILLRGFDQQMAEKVGDYMENHGVKFAKLCVPDEIKQLKVVDTENNKPGLLLVKGHYTD 376 (598)
T ss_dssp -------------CCEEEEESSCSSTTSCHHHHHHHHHHHHHTTCEEEETEEEEEEEEEECCBTTTTBCCEEEEEEEETT
T ss_pred -------------CEEEEEECCcCcCcCCHHHHHHHHHHHHhCCCEEEECCeEEEEEeccccccccCCCceEEEEEEeCC
Confidence 88999999877888999999999999999999999994 66662 2 3332 357
Q ss_pred CcEEe--ccEEEEecCCCCc-cc--cccCCCCCCCCC
Q 018704 319 GTEVP--YGLLVWSTGVGPS-TL--VKSLDLPKSPGG 350 (351)
Q Consensus 319 g~~~~--~D~vi~a~G~~p~-~~--~~~~gl~~~~~G 350 (351)
|++++ +|.||+|+|++|+ ++ ++.+|++++++|
T Consensus 377 g~~~~~~~D~vi~a~G~~p~~~~l~~~~~gl~~~~~G 413 (598)
T 2x8g_A 377 GKKFEEEFETVIFAVGREPQLSKVLCETVGVKLDKNG 413 (598)
T ss_dssp SCEEEEEESEEEECSCEEECGGGTBCGGGCCCBCTTS
T ss_pred CcEEeccCCEEEEEeCCccccCccCchhcCceECCCC
Confidence 77655 9999999999999 66 467788887766
No 66
>1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphi oxidoreductase, oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5
Probab=99.95 E-value=7.7e-27 Score=211.23 Aligned_cols=237 Identities=16% Similarity=0.173 Sum_probs=157.3
Q ss_pred CcEEEECCchhHHHHHHhhhccCceEEEEcCCCccccchhhhhhhccccccc-ccccchhccchhhhcCCCeEEEEE-Ee
Q 018704 63 PRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRNHMVFTPLLASTCVGTLEFR-SVAEPIARIQPAISREPGSYFFLS-HC 140 (351)
Q Consensus 63 ~~VvIIG~G~aGl~aA~~L~~~g~~v~vie~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~-~v 140 (351)
+||+|||||++|+++|..|++.|++|+|||+.....+.... . ........ .....+...........++.++.. +|
T Consensus 2 ~dvvIIG~G~aGl~aA~~l~~~g~~v~li~~~~gG~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~v 79 (310)
T 1fl2_A 2 YDVLIVGSGPAGAAAAIYSARKGIRTGLMGERFGGQILDTV-D-IENYISVPKTEGQKLAGALKVHVDEYDVDVIDSQSA 79 (310)
T ss_dssp EEEEEECCSHHHHHHHHHHHTTTCCEEEECSSTTGGGGGCC-E-ECCBTTBSSEEHHHHHHHHHHHHHTSCEEEECSCCE
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCcEEEEeCCCCceecccc-c-cccccCcCCCCHHHHHHHHHHHHHHcCCeEEccCEE
Confidence 69999999999999999999999999999874211111000 0 00000000 001122222223344557787776 89
Q ss_pred eeEeCCCC---EEEEEeecCccccCCCceeEeeccEEEEecCCCcCCCCCCCccccc-cccCCHHHHHHHHHHHHHhhhc
Q 018704 141 AGIDTDNH---VVHCETVTDELRTLEPWKFKISYDKLVIALGAEASTFGIHGVKENA-TFLREVHHAQEIRRKLLLNLML 216 (351)
Q Consensus 141 ~~i~~~~~---~v~~~~~~~~~~~~~~~~~~~~~d~lviAtG~~p~~p~i~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 216 (351)
+.++.+.+ .+.+.. .++. .+.||+||+|||+.|..|++||.++.. ....... .+...
T Consensus 80 ~~i~~~~~~~~~~~v~~-~~g~--------~~~~~~lv~AtG~~~~~~~~~g~~~~~~~~~~~~~---~~~~~------- 140 (310)
T 1fl2_A 80 SKLIPAAVEGGLHQIET-ASGA--------VLKARSIIVATGAKWRNMNVPGEDQYRTKGVTYCP---HCDGP------- 140 (310)
T ss_dssp EEEECCSSTTCCEEEEE-TTSC--------EEEEEEEEECCCEEECCCCCTTTTTTBTTTEESCH---HHHGG-------
T ss_pred EEEEecccCCceEEEEE-CCCC--------EEEeCEEEECcCCCcCCCCCCChhhcccceeEEec---cCcHh-------
Confidence 99986532 454433 4555 899999999999999999999875321 0111111 11111
Q ss_pred cCCCCCCHhhhcccCeEEEECCChHHHHHHHHHHHHHHHHHHhhhcCCCCccEEEEEeCCCCCCCCcHHHHHHHHHHhhh
Q 018704 217 SDVPGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEILSSFDDRLRHYATTQLSK 296 (351)
Q Consensus 217 ~~~p~~~~~~~~~~~~v~VvGgG~~a~e~a~~l~~~~~~~~~~~~~~~~~~~~v~~~~~~~~l~~~~~~~~~~~~~~l~~ 296 (351)
....++++|||+|.+|+|+|..|.+.+ .+|+++++.+.+. +++ .+.+.+++
T Consensus 141 ----------~~~~~~v~VvG~G~~g~e~A~~l~~~g--------------~~Vtlv~~~~~~~-~~~----~~~~~l~~ 191 (310)
T 1fl2_A 141 ----------LFKGKRVAVIGGGNSGVEAAIDLAGIV--------------EHVTLLEFAPEMK-ADQ----VLQDKLRS 191 (310)
T ss_dssp ----------GGBTCEEEEECCSHHHHHHHHHHHTTB--------------SEEEEECSSSSCC-SCH----HHHHHHHT
T ss_pred ----------hcCCCEEEEECCCHHHHHHHHHHHHhC--------------CEEEEEEeCcccC-ccH----HHHHHHhh
Confidence 123469999999999999999998766 8999999975442 333 34455666
Q ss_pred -cCcEEEcCe-EEEEeCC-----eEEecC---Cc--EEeccEEEEecCCCCc-cccccCCCCCCCCC
Q 018704 297 -SGVRLVRGI-VKDVDSQ-----KLILND---GT--EVPYGLLVWSTGVGPS-TLVKSLDLPKSPGG 350 (351)
Q Consensus 297 -~gV~~~~~~-v~~v~~~-----~v~~~~---g~--~~~~D~vi~a~G~~p~-~~~~~~gl~~~~~G 350 (351)
.||+++.+. ++++..+ ++++.+ |+ ++++|.||+|+|++|+ ++++.. ++++++|
T Consensus 192 ~~gv~v~~~~~v~~i~~~~~~v~~v~~~~~~~g~~~~i~~D~vi~a~G~~p~~~~l~~~-l~~~~~g 257 (310)
T 1fl2_A 192 LKNVDIILNAQTTEVKGDGSKVVGLEYRDRVSGDIHNIELAGIFVQIGLLPNTNWLEGA-VERNRMG 257 (310)
T ss_dssp CTTEEEESSEEEEEEEESSSSEEEEEEEETTTCCEEEEECSEEEECSCEEESCGGGTTT-SCBCTTS
T ss_pred CCCeEEecCCceEEEEcCCCcEEEEEEEECCCCcEEEEEcCEEEEeeCCccCchHHhcc-ccccCCC
Confidence 699999994 9988754 466653 53 6899999999999999 788763 6655544
No 67
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=99.95 E-value=2e-27 Score=216.81 Aligned_cols=233 Identities=13% Similarity=0.140 Sum_probs=162.6
Q ss_pred CCcEEEECCchhHHHHHHhhhccCceEEEEcCCCccccchh--hhhhh-cccccccc-cccchhccchhhhcCCCeEEE-
Q 018704 62 KPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRNHMVFTPL--LASTC-VGTLEFRS-VAEPIARIQPAISREPGSYFF- 136 (351)
Q Consensus 62 ~~~VvIIG~G~aGl~aA~~L~~~g~~v~vie~~~~~~~~~~--~~~~~-~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~- 136 (351)
.+||+|||||++||++|..|++.|++|+|||+++.+..... .+... ...+.+.. ....+...........++.++
T Consensus 7 ~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~~gG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (332)
T 3lzw_A 7 VYDITIIGGGPVGLFTAFYGGMRQASVKIIESLPQLGGQLSALYPEKYIYDVAGFPKIRAQELINNLKEQMAKFDQTICL 86 (332)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCHHHHHHCTTSEECCSTTCSSEEHHHHHHHHHHHHTTSCCEEEC
T ss_pred cceEEEECCCHHHHHHHHHHHHCCCCEEEEEcCCCCCceehhcCCCceEeccCCCCCCCHHHHHHHHHHHHHHhCCcEEc
Confidence 47999999999999999999999999999999876532110 00000 00111111 012222233333344466666
Q ss_pred EEEeeeEeCCCC-EEEEEeecCccccCCCceeEeeccEEEEecCC---CcCCCCCCCccc---cccccCCHHHHHHHHHH
Q 018704 137 LSHCAGIDTDNH-VVHCETVTDELRTLEPWKFKISYDKLVIALGA---EASTFGIHGVKE---NATFLREVHHAQEIRRK 209 (351)
Q Consensus 137 ~~~v~~i~~~~~-~v~~~~~~~~~~~~~~~~~~~~~d~lviAtG~---~p~~p~i~g~~~---~~~~~~~~~~~~~~~~~ 209 (351)
..+|+.++...+ .+.+.. .++ ++.||+||+|||. .|+.|.+||.+. ...+. .+.+..
T Consensus 87 ~~~v~~i~~~~~~~~~v~~-~~g---------~~~~d~vVlAtG~~~~~p~~~~~~g~~~~~g~~~~~-~~~~~~----- 150 (332)
T 3lzw_A 87 EQAVESVEKQADGVFKLVT-NEE---------THYSKTVIITAGNGAFKPRKLELENAEQYEGKNLHY-FVDDLQ----- 150 (332)
T ss_dssp SCCEEEEEECTTSCEEEEE-SSE---------EEEEEEEEECCTTSCCEECCCCCTTGGGGBTTTEES-SCSCGG-----
T ss_pred cCEEEEEEECCCCcEEEEE-CCC---------EEEeCEEEECCCCCcCCCCCCCCCChhhccCceEEE-ecCCHH-----
Confidence 478999998776 555533 233 5899999999999 799999999753 11211 111111
Q ss_pred HHHhhhccCCCCCCHhhhcccCeEEEECCChHHHHHHHHHHHHHHHHHHhhhcCCCCccEEEEEeCCCCCCCCcHHHHHH
Q 018704 210 LLLNLMLSDVPGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEILSSFDDRLRHY 289 (351)
Q Consensus 210 ~~~~~~~~~~p~~~~~~~~~~~~v~VvGgG~~a~e~a~~l~~~~~~~~~~~~~~~~~~~~v~~~~~~~~l~~~~~~~~~~ 289 (351)
....++++|||+|.+|+|+|..|.+.+ .+|+++++.+.+...+..
T Consensus 151 -----------------~~~~~~v~vvG~g~~~~e~a~~l~~~~--------------~~v~~~~~~~~~~~~~~~---- 195 (332)
T 3lzw_A 151 -----------------KFAGRRVAILGGGDSAVDWALMLEPIA--------------KEVSIIHRRDKFRAHEHS---- 195 (332)
T ss_dssp -----------------GGBTCEEEEECSSHHHHHHHHHHTTTB--------------SEEEEECSSSSCSSCHHH----
T ss_pred -----------------HcCCCEEEEECCCHhHHHHHHHHHhhC--------------CeEEEEEecCcCCccHHH----
Confidence 123469999999999999999998765 899999998655444332
Q ss_pred HHHHhhhcCcEEEcCe-EEEEeCC----eEEecC-----CcEEeccEEEEecCCCCc-cccccCCCCC
Q 018704 290 ATTQLSKSGVRLVRGI-VKDVDSQ----KLILND-----GTEVPYGLLVWSTGVGPS-TLVKSLDLPK 346 (351)
Q Consensus 290 ~~~~l~~~gV~~~~~~-v~~v~~~----~v~~~~-----g~~~~~D~vi~a~G~~p~-~~~~~~gl~~ 346 (351)
.+.+++.||+++.+. |++++.+ .+.+.+ +.++++|.||+|+|++|+ ++++.++++.
T Consensus 196 -~~~l~~~gv~~~~~~~v~~i~~~~~~~~v~~~~~~~g~~~~~~~D~vv~a~G~~p~~~~~~~~~~~~ 262 (332)
T 3lzw_A 196 -VENLHASKVNVLTPFVPAELIGEDKIEQLVLEEVKGDRKEILEIDDLIVNYGFVSSLGPIKNWGLDI 262 (332)
T ss_dssp -HHHHHHSSCEEETTEEEEEEECSSSCCEEEEEETTSCCEEEEECSEEEECCCEECCCGGGGGSSCCE
T ss_pred -HHHHhcCCeEEEeCceeeEEecCCceEEEEEEecCCCceEEEECCEEEEeeccCCCchHHhhcCccc
Confidence 244788999999995 9999874 377765 457999999999999999 8999888776
No 68
>3gwf_A Cyclohexanone monooxygenase; flavoprotein biocatalysis baeyer-villiger oxidation green CH monooxygenase, oxidoreductase; HET: FAD NAP; 2.20A {Rhodococcus SP} PDB: 3gwd_A* 3ucl_A*
Probab=99.95 E-value=5.6e-28 Score=234.23 Aligned_cols=236 Identities=14% Similarity=0.128 Sum_probs=156.3
Q ss_pred CCcEEEECCchhHHHHHHhhh-ccCceEEEEcCCCccccchhh---hhhhcccc----------------ccc---cccc
Q 018704 62 KPRVVVLGSGWAGCRLMKGID-TSLYDVVCVSPRNHMVFTPLL---ASTCVGTL----------------EFR---SVAE 118 (351)
Q Consensus 62 ~~~VvIIG~G~aGl~aA~~L~-~~g~~v~vie~~~~~~~~~~~---~~~~~~~~----------------~~~---~~~~ 118 (351)
.+||+|||||++|+++|..|+ +.|++|+|||+++........ ++.....+ .+. ....
T Consensus 8 ~~dVvIIGaG~aGl~aA~~L~~~~G~~v~viE~~~~~GGtw~~~~ypg~~~d~~s~~~~~~~~~~~~~~~~~~~~~~~~~ 87 (540)
T 3gwf_A 8 TVDAVVIGAGFGGIYAVHKLHHELGLTTVGFDKADGPGGTWYWNRYPGALSDTESHLYRFSFDRDLLQESTWKTTYITQP 87 (540)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCCEEEEESSSSSCTHHHHCCCTTCEEEEEGGGSSCCSCHHHHHHCCCSBSEEEHH
T ss_pred CCCEEEECcCHHHHHHHHHHHHcCCCCEEEEECCCCCCCcccccCCCCceecCCcceeeeccccccccCCCCcccCCCHH
Confidence 479999999999999999999 999999999997654321110 01000000 000 0011
Q ss_pred chhccchhhhcCCCe---EEEEEEeeeEeCCCC--EEEEEeecCccccCCCceeEeeccEEEEecC--CCcCCCCCCCcc
Q 018704 119 PIARIQPAISREPGS---YFFLSHCAGIDTDNH--VVHCETVTDELRTLEPWKFKISYDKLVIALG--AEASTFGIHGVK 191 (351)
Q Consensus 119 ~~~~~~~~~~~~~~~---~~~~~~v~~i~~~~~--~v~~~~~~~~~~~~~~~~~~~~~d~lviAtG--~~p~~p~i~g~~ 191 (351)
.+..+........++ ..+..+|+.++.+.. .|.++. .+|+ ++.||+||+||| +.|+.|++||.+
T Consensus 88 ei~~~l~~~~~~~g~~~~i~~~~~V~~i~~~~~~~~~~V~~-~~G~--------~i~ad~lV~AtG~~s~p~~p~ipG~~ 158 (540)
T 3gwf_A 88 EILEYLEDVVDRFDLRRHFKFGTEVTSALYLDDENLWEVTT-DHGE--------VYRAKYVVNAVGLLSAINFPNLPGLD 158 (540)
T ss_dssp HHHHHHHHHHHHTTCGGGEEESCCEEEEEEETTTTEEEEEE-TTSC--------EEEEEEEEECCCSCCSBCCCCCTTGG
T ss_pred HHHHHHHHHHHHcCCcceeEeccEEEEEEEeCCCCEEEEEE-cCCC--------EEEeCEEEECCcccccCCCCCCCCcc
Confidence 122222222222333 344567888876654 666654 4565 799999999999 579999999986
Q ss_pred c---cccccCCHHHHHHHHHHHHHhhhccCCCCCCHhhhcccCeEEEECCChHHHHHHHHHHHHHHHHHHhhhcCCCCcc
Q 018704 192 E---NATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYI 268 (351)
Q Consensus 192 ~---~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~v~VvGgG~~a~e~a~~l~~~~~~~~~~~~~~~~~~~ 268 (351)
. ..++...+.+. ....+|+|+|||+|.+|+|+|..|++.+ .
T Consensus 159 ~f~g~~~~~~~~~~~----------------------~~~~~krV~VIG~G~sgve~a~~l~~~~--------------~ 202 (540)
T 3gwf_A 159 TFEGETIHTAAWPEG----------------------KSLAGRRVGVIGTGSTGQQVITSLAPEV--------------E 202 (540)
T ss_dssp GCCSEEEEGGGCCSS----------------------CCCTTSEEEEECCSHHHHHHHHHHTTTC--------------S
T ss_pred ccCCCEEEeecCCCc----------------------cccccceEEEECCCchHHHHHHHHHhhC--------------C
Confidence 3 22322221110 0134479999999999999999998776 8
Q ss_pred EEEEEeCCC--CCCCC----cHHHHHHHH---------------------------------------------------
Q 018704 269 HVTLIEANE--ILSSF----DDRLRHYAT--------------------------------------------------- 291 (351)
Q Consensus 269 ~v~~~~~~~--~l~~~----~~~~~~~~~--------------------------------------------------- 291 (351)
+|++++|.+ +++.. .+...+.+.
T Consensus 203 ~Vtv~~r~~~~i~p~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~g~~~~ 282 (540)
T 3gwf_A 203 HLTVFVRTPQYSVPVGNRPVNPEQIAEIKADYDRIWERAKNSAVAFGFEESTLPAMSVSEEERNRIFQEAWDHGGGFRFM 282 (540)
T ss_dssp EEEEEESSCCCEEECCCCBCCHHHHHHHHHTHHHHHHHHHTSSSCSSSCCCCCCGGGSCHHHHHHHHHHHHHHCCHHHHH
T ss_pred EEEEEECCCCccccCccCCCCHHHHHHHHhccHHHHHHHHhccccccccccchhhhhCCHHHHHHHHHHHHhcccchhhh
Confidence 999999974 23322 222211111
Q ss_pred ----------------------H---------------------------------HhhhcCcEEE---cCeEEEEeCCe
Q 018704 292 ----------------------T---------------------------------QLSKSGVRLV---RGIVKDVDSQK 313 (351)
Q Consensus 292 ----------------------~---------------------------------~l~~~gV~~~---~~~v~~v~~~~ 313 (351)
+ .+.+.+|+++ ...|.++++++
T Consensus 283 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~dp~~~~~l~P~~~g~kR~~~~~~y~~~l~~~nV~lv~~~~~~I~~it~~g 362 (540)
T 3gwf_A 283 FGTFGDIATDEAANEAAASFIRAKVAEIIEDPETARKLMPKGLFAKRPLCDSGYYEVYNRPNVEAVAIKENPIREVTAKG 362 (540)
T ss_dssp HTSCSCTTTCHHHHHHHHHHHHHHHHHHCCSHHHHHHHCCCSCCCSSCEEESSTGGGGGSTTEEEEETTTSCEEEECSSE
T ss_pred hhhhhhhhcCHHHHHHHHHHHHHHHHHHcCCHHHHHhCCCCCCCccccCCCccHHHHhcCCCEEEEeCCCCCccEEecCe
Confidence 0 0124589999 45699999999
Q ss_pred EEecCCcEEeccEEEEecCCCCcc-ccccC
Q 018704 314 LILNDGTEVPYGLLVWSTGVGPST-LVKSL 342 (351)
Q Consensus 314 v~~~~g~~~~~D~vi~a~G~~p~~-~~~~~ 342 (351)
|+++||+++++|+||+|||++++. ++..+
T Consensus 363 v~~~dG~~~~~DvIV~ATGf~~~~~~~~~~ 392 (540)
T 3gwf_A 363 VVTEDGVLHELDVLVFATGFDAVDGNYRRI 392 (540)
T ss_dssp EEETTCCEEECSEEEECCCBSCSSHHHHTS
T ss_pred EEcCCCCEEECCEEEECCccCccccCcCcc
Confidence 999999999999999999999984 66544
No 69
>2a87_A TRXR, TR, thioredoxin reductase; FAD, NAP, NMA, TLS, oxidoreduct structural genomics, PSI, protein structure initiative; HET: FAD NAP; 3.00A {Mycobacterium tuberculosis}
Probab=99.95 E-value=9.8e-28 Score=219.73 Aligned_cols=241 Identities=17% Similarity=0.212 Sum_probs=156.2
Q ss_pred CCCcEEEECCchhHHHHHHhhhccCceEEEEcCCCccccchhhhhhhcccccccc-c-ccchhccchhhhcCCCeEEEEE
Q 018704 61 EKPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRNHMVFTPLLASTCVGTLEFRS-V-AEPIARIQPAISREPGSYFFLS 138 (351)
Q Consensus 61 ~~~~VvIIG~G~aGl~aA~~L~~~g~~v~vie~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~ 138 (351)
+.+||+|||||++|+++|..|++.|++|+|||+..... ...........+.+.. + ...+...........++.++..
T Consensus 13 ~~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~gg-~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~~~~~ 91 (335)
T 2a87_A 13 PVRDVIVIGSGPAGYTAALYAARAQLAPLVFEGTSFGG-ALMTTTDVENYPGFRNGITGPELMDEMREQALRFGADLRME 91 (335)
T ss_dssp CCEEEEEECCHHHHHHHHHHHHHTTCCCEEECCSSCSC-GGGSCSCBCCSTTCTTCBCHHHHHHHHHHHHHHTTCEEECC
T ss_pred CcCCEEEECCCHHHHHHHHHHHhCCCeEEEEecCCCCC-ceeccchhhhcCCCCCCCCHHHHHHHHHHHHHHcCCEEEEe
Confidence 45899999999999999999999999999999752110 0000000000011100 0 0111222222233346777777
Q ss_pred EeeeEeCCCCEEEEEeecCccccCCCceeEeeccEEEEecCCCcCCCCCCCccccc-cccCCHHHHHHHHHHHHHhhhcc
Q 018704 139 HCAGIDTDNHVVHCETVTDELRTLEPWKFKISYDKLVIALGAEASTFGIHGVKENA-TFLREVHHAQEIRRKLLLNLMLS 217 (351)
Q Consensus 139 ~v~~i~~~~~~v~~~~~~~~~~~~~~~~~~~~~d~lviAtG~~p~~p~i~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 217 (351)
.|+.++. .+.+.+....++. .+.||+||+|||+.|..|++||.+... ..+..... ....+
T Consensus 92 ~v~~i~~-~~~~~v~~~~~g~--------~~~~d~lviAtG~~~~~~~i~g~~~~~~~~~~~~~~---~~~~~------- 152 (335)
T 2a87_A 92 DVESVSL-HGPLKSVVTADGQ--------THRARAVILAMGAAARYLQVPGEQELLGRGVSSCAT---CDGFF------- 152 (335)
T ss_dssp CEEEEEC-SSSSEEEEETTSC--------EEEEEEEEECCCEEECCCCCTHHHHTBTTTEESCHH---HHGGG-------
T ss_pred eEEEEEe-CCcEEEEEeCCCC--------EEEeCEEEECCCCCccCCCCCchHhccCCceEEeec---cchhh-------
Confidence 7888887 4434331224555 899999999999999999999864311 01111111 11110
Q ss_pred CCCCCCHhhhcccCeEEEECCChHHHHHHHHHHHHHHHHHHhhhcCCCCccEEEEEeCCCCCCCCcHHHHHHHHHHhhhc
Q 018704 218 DVPGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEILSSFDDRLRHYATTQLSKS 297 (351)
Q Consensus 218 ~~p~~~~~~~~~~~~v~VvGgG~~a~e~a~~l~~~~~~~~~~~~~~~~~~~~v~~~~~~~~l~~~~~~~~~~~~~~l~~~ 297 (351)
...++++|||+|.+|+|+|..|.+++ .+|+++++...+.. ...+. .+.+++.
T Consensus 153 ----------~~~~~v~ViG~G~~g~e~a~~l~~~g--------------~~V~l~~~~~~~~~-~~~~~---~~~~~~~ 204 (335)
T 2a87_A 153 ----------FRDQDIAVIGGGDSAMEEATFLTRFA--------------RSVTLVHRRDEFRA-SKIML---DRARNND 204 (335)
T ss_dssp ----------GTTCEEEEECSSHHHHHHHHHHTTTC--------------SEEEEECSSSSCSS-CTTHH---HHHHHCT
T ss_pred ----------cCCCEEEEECCCHHHHHHHHHHHHhC--------------CeEEEEEcCCcCCc-cHHHH---HHHhccC
Confidence 23469999999999999999998766 89999999753321 12222 2345678
Q ss_pred CcEEEcCe-EEEEeCCe----EEec---CC--cEEeccEEEEecCCCCc-cccccCCCCCCCCC
Q 018704 298 GVRLVRGI-VKDVDSQK----LILN---DG--TEVPYGLLVWSTGVGPS-TLVKSLDLPKSPGG 350 (351)
Q Consensus 298 gV~~~~~~-v~~v~~~~----v~~~---~g--~~~~~D~vi~a~G~~p~-~~~~~~gl~~~~~G 350 (351)
||+++.+. |++++.+. +.+. +| +++++|.||+|+|++|+ ++++ .++++|++|
T Consensus 205 gV~v~~~~~v~~i~~~~~~~~v~~~~~~~g~~~~i~~D~vi~a~G~~p~~~~~~-~~l~~~~~G 267 (335)
T 2a87_A 205 KIRFLTNHTVVAVDGDTTVTGLRVRDTNTGAETTLPVTGVFVAIGHEPRSGLVR-EAIDVDPDG 267 (335)
T ss_dssp TEEEECSEEEEEEECSSSCCEEEEEEETTSCCEEECCSCEEECSCEEECCTTTB-TTBCBCTTS
T ss_pred CcEEEeCceeEEEecCCcEeEEEEEEcCCCceEEeecCEEEEccCCccChhHhh-cccccCCCc
Confidence 99999995 99998653 7775 45 57899999999999999 6776 467766555
No 70
>1v59_A Dihydrolipoamide dehydrogenase; 2-oxoacid dehydroganese complex, pyruvate dehydrogenase complex; HET: FAD NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1jeh_A*
Probab=99.95 E-value=1.2e-26 Score=222.54 Aligned_cols=244 Identities=18% Similarity=0.241 Sum_probs=165.0
Q ss_pred CCcEEEECCchhHHHHHHhhhccCceEEEEcCCCccccchhhh----------------hh-----hcccccccccccch
Q 018704 62 KPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRNHMVFTPLLA----------------ST-----CVGTLEFRSVAEPI 120 (351)
Q Consensus 62 ~~~VvIIG~G~aGl~aA~~L~~~g~~v~vie~~~~~~~~~~~~----------------~~-----~~~~~~~~~~~~~~ 120 (351)
++||+|||||++|+++|..|++.|++|+|||+++.+....... .. ..+...........
T Consensus 5 ~~dVvIIGgG~aGl~aA~~l~~~G~~V~liE~~~~~GG~~~~~g~~psk~l~~~~~~~~~~~~~~~~~gi~~~~~~~~~~ 84 (478)
T 1v59_A 5 SHDVVIIGGGPAGYVAAIKAAQLGFNTACVEKRGKLGGTCLNVGCIPSKALLNNSHLFHQMHTEAQKRGIDVNGDIKINV 84 (478)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSSSHHHHHHSHHHHHHHHHHHHHHHHHHHTSGGGTEEECSCEEECH
T ss_pred cCCEEEECCCHHHHHHHHHHHHCCCeEEEEecCCCcCCccceeccHHHHHHHHHHHHHHHHHHHHHhcCcccCCCCccCH
Confidence 4799999999999999999999999999999966542110000 00 00100000000000
Q ss_pred hc--------------cchhhhcCCCeEEEEEEeeeEeCCCCEEEEEeecCccccCCCceeE------eeccEEEEecCC
Q 018704 121 AR--------------IQPAISREPGSYFFLSHCAGIDTDNHVVHCETVTDELRTLEPWKFK------ISYDKLVIALGA 180 (351)
Q Consensus 121 ~~--------------~~~~~~~~~~~~~~~~~v~~i~~~~~~v~~~~~~~~~~~~~~~~~~------~~~d~lviAtG~ 180 (351)
.. .........++.++......+ +.+.+.+.. .++. ... +.||+||+|||+
T Consensus 85 ~~~~~~~~~~~~~l~~~~~~~~~~~gv~~~~g~~~~~--~~~~v~V~~-~~G~------~~~~~~~~~i~~d~lViAtGs 155 (478)
T 1v59_A 85 ANFQKAKDDAVKQLTGGIELLFKKNKVTYYKGNGSFE--DETKIRVTP-VDGL------EGTVKEDHILDVKNIIVATGS 155 (478)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTTCEEEESEEEES--SSSEEEEEC-CTTC------TTCCSSCEEEEEEEEEECCCE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEEEEEEc--cCCeEEEEe-cCCC------cccccccceEEeCEEEECcCC
Confidence 00 011122335777776654433 455666643 2331 015 999999999999
Q ss_pred CcCCCCCCCccccccccCCHHHHHHHHHHHHHhhhccCCCCCCHhhhcccCeEEEECCChHHHHHHHHHHHHHHHHHHhh
Q 018704 181 EASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQR 260 (351)
Q Consensus 181 ~p~~p~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~v~VvGgG~~a~e~a~~l~~~~~~~~~~~ 260 (351)
.|+ .+||.+.....+.+..++.. +... .++++|||||.+|+|+|..|.+++
T Consensus 156 ~p~--~~~g~~~~~~~v~~~~~~~~----------~~~~----------~~~vvViGgG~~g~e~A~~l~~~g------- 206 (478)
T 1v59_A 156 EVT--PFPGIEIDEEKIVSSTGALS----------LKEI----------PKRLTIIGGGIIGLEMGSVYSRLG------- 206 (478)
T ss_dssp EEC--CCTTCCCCSSSEECHHHHTT----------CSSC----------CSEEEEECCSHHHHHHHHHHHHTT-------
T ss_pred CCC--CCCCCCCCCceEEcHHHHHh----------hhcc----------CceEEEECCCHHHHHHHHHHHHcC-------
Confidence 874 34554311112223332211 1122 359999999999999999999887
Q ss_pred hcCCCCccEEEEEeCC-CCCCCCcHHHHHHHHHHhhhcCcEEEcCe-EEEEeC--C----eEEec-----CCcEEeccEE
Q 018704 261 YSHVKDYIHVTLIEAN-EILSSFDDRLRHYATTQLSKSGVRLVRGI-VKDVDS--Q----KLILN-----DGTEVPYGLL 327 (351)
Q Consensus 261 ~~~~~~~~~v~~~~~~-~~l~~~~~~~~~~~~~~l~~~gV~~~~~~-v~~v~~--~----~v~~~-----~g~~~~~D~v 327 (351)
.+|+++++. .+++.+++++.+.+.+.+++.||+++.+. |++++. + .+.+. +++++++|.|
T Consensus 207 -------~~Vtlv~~~~~~l~~~~~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~~~~~~~v~~~~~~~g~~~~~~~D~v 279 (478)
T 1v59_A 207 -------SKVTVVEFQPQIGASMDGEVAKATQKFLKKQGLDFKLSTKVISAKRNDDKNVVEIVVEDTKTNKQENLEAEVL 279 (478)
T ss_dssp -------CEEEEECSSSSSSSSSCHHHHHHHHHHHHHTTCEEECSEEEEEEEEETTTTEEEEEEEETTTTEEEEEEESEE
T ss_pred -------CEEEEEEeCCccccccCHHHHHHHHHHHHHCCCEEEeCCEEEEEEEecCCCeEEEEEEEcCCCCceEEECCEE
Confidence 899999997 57788999999999999999999999994 998864 2 35554 3567999999
Q ss_pred EEecCCCCc-c--ccccCCCCCCCCC
Q 018704 328 VWSTGVGPS-T--LVKSLDLPKSPGG 350 (351)
Q Consensus 328 i~a~G~~p~-~--~~~~~gl~~~~~G 350 (351)
|+|+|++|+ + +++.+|++++++|
T Consensus 280 v~a~G~~p~~~~l~l~~~g~~~~~~G 305 (478)
T 1v59_A 280 LVAVGRRPYIAGLGAEKIGLEVDKRG 305 (478)
T ss_dssp EECSCEEECCTTSCTTTTTCCBCTTS
T ss_pred EECCCCCcCCCCCCchhcCceeCCCC
Confidence 999999999 5 7888898887666
No 71
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=99.95 E-value=4.1e-27 Score=217.66 Aligned_cols=237 Identities=14% Similarity=0.131 Sum_probs=161.9
Q ss_pred CCcEEEECCchhHHHHHHhhhccCceEEEEcCCCccccchh--hhhh-hccccccccc-ccchhccchhhhcCCCeEEE-
Q 018704 62 KPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRNHMVFTPL--LAST-CVGTLEFRSV-AEPIARIQPAISREPGSYFF- 136 (351)
Q Consensus 62 ~~~VvIIG~G~aGl~aA~~L~~~g~~v~vie~~~~~~~~~~--~~~~-~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~- 136 (351)
.+||+|||||++||++|..|++.|++|+|||+++.+..... .+.. ....+.+..+ ...+.+.........++.++
T Consensus 14 ~~dvvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 93 (360)
T 3ab1_A 14 MRDLTIIGGGPTGIFAAFQCGMNNISCRIIESMPQLGGQLAALYPEKHIYDVAGFPEVPAIDLVESLWAQAERYNPDVVL 93 (360)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCHHHHHTCTTSEECCSTTCSSEEHHHHHHHHHHHHHTTCCEEEC
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCCEEEEecCCCCCCcccccCCCcccccCCCCCCCCHHHHHHHHHHHHHHhCCEEEc
Confidence 57999999999999999999999999999999876432211 0000 0000111000 01111122222333455554
Q ss_pred EEEeeeEeCCCC-EEEEEeecCccccCCCceeEeeccEEEEecCC---CcCCCCCCC-cccc----ccc-cCCHHHHHHH
Q 018704 137 LSHCAGIDTDNH-VVHCETVTDELRTLEPWKFKISYDKLVIALGA---EASTFGIHG-VKEN----ATF-LREVHHAQEI 206 (351)
Q Consensus 137 ~~~v~~i~~~~~-~v~~~~~~~~~~~~~~~~~~~~~d~lviAtG~---~p~~p~i~g-~~~~----~~~-~~~~~~~~~~ 206 (351)
..+|+.++.+.+ .+.+.. .++. .+.||+||+|||. .|..+++|| .+.. +.+ ..+..
T Consensus 94 ~~~v~~i~~~~~~~~~v~~-~~g~--------~~~~~~li~AtG~~~~~~~~~~i~g~~~~~~~~~v~~~~~~~~----- 159 (360)
T 3ab1_A 94 NETVTKYTKLDDGTFETRT-NTGN--------VYRSRAVLIAAGLGAFEPRKLPQLGNIDHLTGSSVYYAVKSVE----- 159 (360)
T ss_dssp SCCEEEEEECTTSCEEEEE-TTSC--------EEEEEEEEECCTTCSCCBCCCGGGCCCTTTBTTTEESSCSCGG-----
T ss_pred CCEEEEEEECCCceEEEEE-CCCc--------EEEeeEEEEccCCCcCCCCCCCCCCchhhCcCceEEEecCCHH-----
Confidence 457888887654 555543 4555 8999999999998 577777887 5321 111 11111
Q ss_pred HHHHHHhhhccCCCCCCHhhhcccCeEEEECCChHHHHHHHHHHHHHHHHHHhhhcCCCCccEEEEEeCCCCCCCCcHHH
Q 018704 207 RRKLLLNLMLSDVPGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEILSSFDDRL 286 (351)
Q Consensus 207 ~~~~~~~~~~~~~p~~~~~~~~~~~~v~VvGgG~~a~e~a~~l~~~~~~~~~~~~~~~~~~~~v~~~~~~~~l~~~~~~~ 286 (351)
....++|+|||+|.+|+|+|..|.+.+ .+|+++++.+.+... +..
T Consensus 160 --------------------~~~~~~vvVvG~G~~g~e~A~~l~~~g--------------~~V~lv~~~~~~~~~-~~~ 204 (360)
T 3ab1_A 160 --------------------DFKGKRVVIVGGGDSALDWTVGLIKNA--------------ASVTLVHRGHEFQGH-GKT 204 (360)
T ss_dssp --------------------GGTTCEEEEECSSHHHHHHHHHTTTTS--------------SEEEEECSSSSCSSC-SHH
T ss_pred --------------------HcCCCcEEEECCCHHHHHHHHHHHhcC--------------CEEEEEEcCCCCCCC-HHH
Confidence 013459999999999999999998765 899999997543332 355
Q ss_pred HHHHHHHhhhcCcEEEcC-eEEEEeCC-----eEEec--CC--cEEeccEEEEecCCCCc-cccccCCCCCC
Q 018704 287 RHYATTQLSKSGVRLVRG-IVKDVDSQ-----KLILN--DG--TEVPYGLLVWSTGVGPS-TLVKSLDLPKS 347 (351)
Q Consensus 287 ~~~~~~~l~~~gV~~~~~-~v~~v~~~-----~v~~~--~g--~~~~~D~vi~a~G~~p~-~~~~~~gl~~~ 347 (351)
.+.+.+.+++.||+++.+ +|++++.+ +|.+. +| .++++|.||+|+|++|+ ++++.++++++
T Consensus 205 ~~~l~~~~~~~gv~i~~~~~v~~i~~~~~~v~~v~~~~~~g~~~~i~~D~vi~a~G~~p~~~~l~~~~~~~~ 276 (360)
T 3ab1_A 205 AHEVERARANGTIDVYLETEVASIEESNGVLTRVHLRSSDGSKWTVEADRLLILIGFKSNLGPLARWDLELY 276 (360)
T ss_dssp HHSSHHHHHHTSEEEESSEEEEEEEEETTEEEEEEEEETTCCEEEEECSEEEECCCBCCSCGGGGGSSCCEE
T ss_pred HHHHHHHhhcCceEEEcCcCHHHhccCCCceEEEEEEecCCCeEEEeCCEEEECCCCCCCHHHHHhhccccc
Confidence 666777888899999999 59888753 57774 77 57999999999999999 79988887765
No 72
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=99.95 E-value=2.3e-27 Score=216.85 Aligned_cols=245 Identities=16% Similarity=0.176 Sum_probs=160.3
Q ss_pred CCcEEEECCchhHHHHHHhhhccCceEEEEcC----CCccccchhhhhhhcccccccc--cccchhccchhhhcCCCeEE
Q 018704 62 KPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSP----RNHMVFTPLLASTCVGTLEFRS--VAEPIARIQPAISREPGSYF 135 (351)
Q Consensus 62 ~~~VvIIG~G~aGl~aA~~L~~~g~~v~vie~----~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~ 135 (351)
.+||+|||||++|+++|+.|++.|++|+|||+ .................+.+.. ....+...........++.+
T Consensus 8 ~~~vvIIG~G~aGl~~A~~l~~~g~~v~lie~~~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~gv~~ 87 (333)
T 1vdc_A 8 NTRLCIVGSGPAAHTAAIYAARAELKPLLFEGWMANDIAPGGQLTTTTDVENFPGFPEGILGVELTDKFRKQSERFGTTI 87 (333)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCCEEECCSSBTTBCTTCGGGGCSEECCSTTCTTCEEHHHHHHHHHHHHHHTTCEE
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCeEEEEeccCccccCCCceeeeccccccCCCCccCCCHHHHHHHHHHHHHHCCCEE
Confidence 47999999999999999999999999999998 2221110000000000111100 01112222222233446777
Q ss_pred EEEEeeeEeCCCCEEEEEeecCccccCCCceeEeeccEEEEecCCCcCCCCCCCcccc--ccccCCHHHHHHHHHHHHHh
Q 018704 136 FLSHCAGIDTDNHVVHCETVTDELRTLEPWKFKISYDKLVIALGAEASTFGIHGVKEN--ATFLREVHHAQEIRRKLLLN 213 (351)
Q Consensus 136 ~~~~v~~i~~~~~~v~~~~~~~~~~~~~~~~~~~~~d~lviAtG~~p~~p~i~g~~~~--~~~~~~~~~~~~~~~~~~~~ 213 (351)
+...|..++.+.+.+.+.. ++. .+.||+||+|||..|..|++||.+.. .+....+.....+....
T Consensus 88 ~~~~v~~i~~~~~~~~v~~--~~~--------~~~~~~vv~A~G~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~--- 154 (333)
T 1vdc_A 88 FTETVTKVDFSSKPFKLFT--DSK--------AILADAVILAIGAVAKRLSFVGSGEVLGGFWNRGISACAVCDGAA--- 154 (333)
T ss_dssp ECCCCCEEECSSSSEEEEC--SSE--------EEEEEEEEECCCEEECCCCCBTCSSSSSCCBTTTEESCHHHHTTS---
T ss_pred EEeEEEEEEEcCCEEEEEE--CCc--------EEEcCEEEECCCCCcCCCCCCCccccccccccCcEEEeccCccch---
Confidence 7777999998877666654 444 89999999999999999999987531 12212221111111110
Q ss_pred hhccCCCCCCHhhhcccCeEEEECCChHHHHHHHHHHHHHHHHHHhhhcCCCCccEEEEEeCCCCCCCCcHHHHHHHHHH
Q 018704 214 LMLSDVPGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEILSSFDDRLRHYATTQ 293 (351)
Q Consensus 214 ~~~~~~p~~~~~~~~~~~~v~VvGgG~~a~e~a~~l~~~~~~~~~~~~~~~~~~~~v~~~~~~~~l~~~~~~~~~~~~~~ 293 (351)
.....++|+|||+|.+|+|+|..|.+.+ .+|+++++.+.+.. .+.+ ..+.
T Consensus 155 ------------~~~~~~~v~VvG~G~~g~e~A~~l~~~g--------------~~V~lv~~~~~~~~-~~~~---~~~~ 204 (333)
T 1vdc_A 155 ------------PIFRNKPLAVIGGGDSAMEEANFLTKYG--------------SKVYIIHRRDAFRA-SKIM---QQRA 204 (333)
T ss_dssp ------------GGGTTSEEEEECCSHHHHHHHHHHTTTS--------------SEEEEECSSSSCCS-CHHH---HHHH
T ss_pred ------------hhcCCCeEEEECCChHHHHHHHHHHhcC--------------CeEEEEecCCcCCc-cHHH---HHHH
Confidence 0023469999999999999999998766 89999999754321 2222 2244
Q ss_pred hhhcCcEEEcCe-EEEEeCCe-------EEec---CC--cEEeccEEEEecCCCCc-cccccCCCCCCCCC
Q 018704 294 LSKSGVRLVRGI-VKDVDSQK-------LILN---DG--TEVPYGLLVWSTGVGPS-TLVKSLDLPKSPGG 350 (351)
Q Consensus 294 l~~~gV~~~~~~-v~~v~~~~-------v~~~---~g--~~~~~D~vi~a~G~~p~-~~~~~~gl~~~~~G 350 (351)
+++.||+++.+. |+++..+. +.+. +| .++++|.||+|+|++|+ ++++ .+++++++|
T Consensus 205 ~~~~gv~i~~~~~v~~i~~~~~~~~v~~v~~~~~~~g~~~~i~~D~vi~a~G~~p~~~~~~-~~l~~~~~G 274 (333)
T 1vdc_A 205 LSNPKIDVIWNSSVVEAYGDGERDVLGGLKVKNVVTGDVSDLKVSGLFFAIGHEPATKFLD-GGVELDSDG 274 (333)
T ss_dssp HTCTTEEEECSEEEEEEEESSSSSSEEEEEEEETTTCCEEEEECSEEEECSCEEESCGGGT-TSSCBCTTS
T ss_pred HhCCCeeEecCCceEEEeCCCCccceeeEEEEecCCCceEEEecCEEEEEeCCccchHHhh-ccccccCCC
Confidence 567899999994 98887532 7775 45 56899999999999999 6765 467766555
No 73
>1lvl_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD NAD; 2.45A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=99.95 E-value=1.2e-26 Score=221.24 Aligned_cols=234 Identities=21% Similarity=0.254 Sum_probs=161.5
Q ss_pred CCcEEEECCchhHHHHHHhhhccCceEEEEcCCCccccch----hhhh-----------hh--------cccccc---cc
Q 018704 62 KPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRNHMVFTP----LLAS-----------TC--------VGTLEF---RS 115 (351)
Q Consensus 62 ~~~VvIIG~G~aGl~aA~~L~~~g~~v~vie~~~~~~~~~----~~~~-----------~~--------~~~~~~---~~ 115 (351)
++||+|||||+||++||..|++.|++|+|||++ .+.... ..+. .. .+.... .+
T Consensus 5 ~~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~-~~GG~~~~~g~~Psk~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 83 (458)
T 1lvl_A 5 QTTLLIIGGGPGGYVAAIRAGQLGIPTVLVEGQ-ALGGTCLNIGCIPSKALIHVAEQFHQASRFTEPSPLGISVASPRLD 83 (458)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHHTCCEEEECSS-CTTHHHHHHSHHHHHHHHHHHHHHHHHHHTTSCCTTCCCCCCCCCC
T ss_pred cCCEEEECCCHHHHHHHHHHHHCCCEEEEEccC-CCCCcCCCcCcHhHHHHHHHHHHHHHHhhcccccccCcccCCCccC
Confidence 489999999999999999999999999999994 321110 0000 00 111100 00
Q ss_pred cccchhc----------cchhhhcCCCeEEEEEEeeeEeCCCCEEEEEeecCccccCCCceeEeeccEEEEecCCCcCCC
Q 018704 116 VAEPIAR----------IQPAISREPGSYFFLSHCAGIDTDNHVVHCETVTDELRTLEPWKFKISYDKLVIALGAEASTF 185 (351)
Q Consensus 116 ~~~~~~~----------~~~~~~~~~~~~~~~~~v~~i~~~~~~v~~~~~~~~~~~~~~~~~~~~~d~lviAtG~~p~~p 185 (351)
+...+.. ....+....++.++.+.+..++ .+.+.+. + . .+.||+||||||+.|+.|
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~g~~~~~~--~~~v~v~---~-~--------~~~~d~lviATGs~p~~~ 149 (458)
T 1lvl_A 84 IGQSVAWKDGIVDRLTTGVAALLKKHGVKVVHGWAKVLD--GKQVEVD---G-Q--------RIQCEHLLLATGSSSVEL 149 (458)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTTCEEECSCEEEEE--TTEEEET---T-E--------EEECSEEEECCCEEECCB
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCcEEEEEEEEEcc--CCEEEEe---e-E--------EEEeCEEEEeCCCCCCCC
Confidence 1000000 0112233457777776665554 4566542 2 3 899999999999998877
Q ss_pred C-CCCccccccccCCHHHHHHHHHHHHHhhhccCCCCCCHhhhcccCeEEEECCChHHHHHHHHHHHHHHHHHHhhhcCC
Q 018704 186 G-IHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHV 264 (351)
Q Consensus 186 ~-i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~v~VvGgG~~a~e~a~~l~~~~~~~~~~~~~~~ 264 (351)
+ +|. +..+ .+..+.. .+.. ..++++|||||.+|+|+|..|.+++
T Consensus 150 ~~~~~-~~~v---~~~~~~~----------~~~~----------~~~~vvViGgG~~g~e~A~~l~~~g----------- 194 (458)
T 1lvl_A 150 PMLPL-GGPV---ISSTEAL----------APKA----------LPQHLVVVGGGYIGLELGIAYRKLG----------- 194 (458)
T ss_dssp TTBCC-BTTE---ECHHHHT----------CCSS----------CCSEEEEECCSHHHHHHHHHHHHHT-----------
T ss_pred CCCCc-cCcE---ecHHHHh----------hhhc----------cCCeEEEECcCHHHHHHHHHHHHCC-----------
Confidence 5 552 2222 2222221 1112 2359999999999999999999887
Q ss_pred CCccEEEEEeCC-CCCCCCcHHHHHHHHHHhhhcCcEEEcC-eEEEEeCCeEEec--CC--cEEeccEEEEecCCCCc-c
Q 018704 265 KDYIHVTLIEAN-EILSSFDDRLRHYATTQLSKSGVRLVRG-IVKDVDSQKLILN--DG--TEVPYGLLVWSTGVGPS-T 337 (351)
Q Consensus 265 ~~~~~v~~~~~~-~~l~~~~~~~~~~~~~~l~~~gV~~~~~-~v~~v~~~~v~~~--~g--~~~~~D~vi~a~G~~p~-~ 337 (351)
.+|+++++. .+++.+++++.+.+.+.+++.||+++.+ +|++++.+++.+. +| +++++|.||+|+|++|+ +
T Consensus 195 ---~~Vtlv~~~~~~l~~~~~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~v~v~~~~G~~~~i~~D~vv~a~G~~p~~~ 271 (458)
T 1lvl_A 195 ---AQVSVVEARERILPTYDSELTAPVAESLKKLGIALHLGHSVEGYENGCLLANDGKGGQLRLEADRVLVAVGRRPRTK 271 (458)
T ss_dssp ---CEEEEECSSSSSSTTSCHHHHHHHHHHHHHHTCEEETTCEEEEEETTEEEEECSSSCCCEECCSCEEECCCEEECCS
T ss_pred ---CeEEEEEcCCccccccCHHHHHHHHHHHHHCCCEEEECCEEEEEEeCCEEEEECCCceEEEECCEEEECcCCCcCCC
Confidence 899999997 5778889999999999999999999999 4999986545554 56 67999999999999999 5
Q ss_pred c--cccCCCCCCC
Q 018704 338 L--VKSLDLPKSP 348 (351)
Q Consensus 338 ~--~~~~gl~~~~ 348 (351)
+ ++.+|+++++
T Consensus 272 ~l~~~~~g~~~~~ 284 (458)
T 1lvl_A 272 GFNLECLDLKMNG 284 (458)
T ss_dssp SSSGGGSCCCEET
T ss_pred CCCcHhcCCcccC
Confidence 4 5777776543
No 74
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}
Probab=99.94 E-value=1.4e-27 Score=219.84 Aligned_cols=240 Identities=19% Similarity=0.199 Sum_probs=156.4
Q ss_pred CCcEEEECCchhHHHHHHhhhccCceEEEEcCCCccccc--hhhhh----------hhccccccc-----ccccchhccc
Q 018704 62 KPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRNHMVFT--PLLAS----------TCVGTLEFR-----SVAEPIARIQ 124 (351)
Q Consensus 62 ~~~VvIIG~G~aGl~aA~~L~~~g~~v~vie~~~~~~~~--~~~~~----------~~~~~~~~~-----~~~~~~~~~~ 124 (351)
++||+|||||++|+++|..|++.|++|+|||+++..... ..+.. ...+..... .....+..+.
T Consensus 3 ~~~vvIIG~G~aGl~~A~~l~~~g~~v~vie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 82 (357)
T 4a9w_A 3 SVDVVVIGGGQSGLSAGYFLRRSGLSYVILDAEASPGGAWQHAWHSLHLFSPAGWSSIPGWPMPASQGPYPARAEVLAYL 82 (357)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHSSCCEEEECCSSSSSGGGGGSCTTCBCSSCGGGSCCSSSCCCCCSSSSCBHHHHHHHH
T ss_pred cCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCCCCCCcccCCCCCcEecCchhhhhCCCCCCCCCccCCCCHHHHHHHH
Confidence 379999999999999999999999999999998754211 00000 000000000 0001222222
Q ss_pred hhhhcCCCeEEEE-EEeeeEeCCCCEEE-EEeecCccccCCCceeEeeccEEEEecCC--CcCCCCCCCcccc---cccc
Q 018704 125 PAISREPGSYFFL-SHCAGIDTDNHVVH-CETVTDELRTLEPWKFKISYDKLVIALGA--EASTFGIHGVKEN---ATFL 197 (351)
Q Consensus 125 ~~~~~~~~~~~~~-~~v~~i~~~~~~v~-~~~~~~~~~~~~~~~~~~~~d~lviAtG~--~p~~p~i~g~~~~---~~~~ 197 (351)
..+....++.++. .+|+.++.+.+.|. +++ ++. ++.||+||+|||. .|..|.+||.+.. .++.
T Consensus 83 ~~~~~~~~~~~~~~~~v~~i~~~~~~~~~v~~--~~g--------~~~~d~vV~AtG~~~~~~~~~~~g~~~~~~~~~~~ 152 (357)
T 4a9w_A 83 AQYEQKYALPVLRPIRVQRVSHFGERLRVVAR--DGR--------QWLARAVISATGTWGEAYTPEYQGLESFAGIQLHS 152 (357)
T ss_dssp HHHHHHTTCCEECSCCEEEEEEETTEEEEEET--TSC--------EEEEEEEEECCCSGGGBCCCCCTTGGGCCSEEEEG
T ss_pred HHHHHHcCCEEEcCCEEEEEEECCCcEEEEEe--CCC--------EEEeCEEEECCCCCCCCCCCCCCCccccCCcEEEe
Confidence 2333334555544 58999998888877 643 223 7999999999995 5778999997531 2222
Q ss_pred CCHHHHHHHHHHHHHhhhccCCCCCCHhhhcccCeEEEECCChHHHHHHHHHHHHHHHHHHhhhcCCCCccEEEEEeCC-
Q 018704 198 REVHHAQEIRRKLLLNLMLSDVPGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN- 276 (351)
Q Consensus 198 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~v~VvGgG~~a~e~a~~l~~~~~~~~~~~~~~~~~~~~v~~~~~~- 276 (351)
..+.+. .....++|+|||+|.+|+|+|..|.+.+ +|+++.+.
T Consensus 153 ~~~~~~----------------------~~~~~~~v~VvG~G~~g~e~a~~l~~~~---------------~v~~v~~~~ 195 (357)
T 4a9w_A 153 AHYSTP----------------------APFAGMRVAIIGGGNSGAQILAEVSTVA---------------ETTWITQHE 195 (357)
T ss_dssp GGCCCS----------------------GGGTTSEEEEECCSHHHHHHHHHHTTTS---------------EEEEECSSC
T ss_pred ccCCCh----------------------hhcCCCEEEEECCCcCHHHHHHHHHhhC---------------CEEEEECCC
Confidence 111111 1123469999999999999999998653 59999886
Q ss_pred C-CCCCC--cHHHHHHHHHHhh----------------------------hcCcEEEcC-eEEEEeCCeEEecCCcEEec
Q 018704 277 E-ILSSF--DDRLRHYATTQLS----------------------------KSGVRLVRG-IVKDVDSQKLILNDGTEVPY 324 (351)
Q Consensus 277 ~-~l~~~--~~~~~~~~~~~l~----------------------------~~gV~~~~~-~v~~v~~~~v~~~~g~~~~~ 324 (351)
. +++.. ...+.+.+.+.+. +.|+ +..+ .+.+++.+++.+.+|+++++
T Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~-i~~~~~v~~~~~~~v~~~~g~~i~~ 274 (357)
T 4a9w_A 196 PAFLADDVDGRVLFERATERWKAQQEGREPDLPPGGFGDIVMVPPVLDARARGV-LAAVPPPARFSPTGMQWADGTERAF 274 (357)
T ss_dssp CCBCCTTCCTHHHHTC----------------------CBCCCHHHHHHHHTTC-CCEECCCSEEETTEEECTTSCEEEC
T ss_pred CeecchhhcCccHHHHHHHHHhccccccCCCcccccccCcccChhHHHHHhcCc-eEEecCcceEeCCeeEECCCCEecC
Confidence 2 33322 2333322222222 3444 3334 47788889999999999999
Q ss_pred cEEEEecCCCCc-cccccCCCCCCCCC
Q 018704 325 GLLVWSTGVGPS-TLVKSLDLPKSPGG 350 (351)
Q Consensus 325 D~vi~a~G~~p~-~~~~~~gl~~~~~G 350 (351)
|.||+|+|++|+ +|++.++++ +++|
T Consensus 275 D~vi~a~G~~p~~~~l~~~gl~-~~~G 300 (357)
T 4a9w_A 275 DAVIWCTGFRPALSHLKGLDLV-TPQG 300 (357)
T ss_dssp SEEEECCCBCCCCGGGTTTTCB-CTTS
T ss_pred CEEEECCCcCCCCcccCccccc-CCCC
Confidence 999999999999 999999887 6655
No 75
>3ic9_A Dihydrolipoamide dehydrogenase; APC62701, colwellia psychrer 34H, structural genomics, PSI-2; HET: FAD; 2.15A {Colwellia psychrerythraea}
Probab=99.94 E-value=4.5e-27 Score=226.16 Aligned_cols=237 Identities=16% Similarity=0.196 Sum_probs=159.7
Q ss_pred CCcEEEECCchhHHHHHHhhhccCceEEEEcCCCccccch----hhh-----------hhh-----ccc------ccccc
Q 018704 62 KPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRNHMVFTP----LLA-----------STC-----VGT------LEFRS 115 (351)
Q Consensus 62 ~~~VvIIG~G~aGl~aA~~L~~~g~~v~vie~~~~~~~~~----~~~-----------~~~-----~~~------~~~~~ 115 (351)
++||+||||||||++||..|++.|++|+|||++... ... +.+ ... .+. ..+..
T Consensus 8 ~~DvvVIGgG~aGl~aA~~la~~G~~V~liE~~~~G-Gtc~~~gciPsk~l~~~a~~~~~~~~~~~~g~~~~~~~~~~~~ 86 (492)
T 3ic9_A 8 NVDVAIIGTGTAGMGAYRAAKKHTDKVVLIEGGAYG-TTCARVGCMPSKLLIAAADASYHASQTDLFGIQVDRISVNGKA 86 (492)
T ss_dssp EEEEEEECCSHHHHHHHHHHHTTCSCEEEEESSCSS-CHHHHHSHHHHHHHHHHHHHHHHHTCGGGGTEECSEEEECHHH
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCcEEEEeCCCCC-CcccccChhcCHHHHHHHHHHHHHhhhhhcCcCCCCCccCHHH
Confidence 479999999999999999999999999999997521 110 000 000 000 01100
Q ss_pred cccchhccc--------hhhhcCCCeEEEEEEeeeEeCCCCEEEEEeecCccccCCCceeEeeccEEEEecCCCcCCCCC
Q 018704 116 VAEPIARIQ--------PAISREPGSYFFLSHCAGIDTDNHVVHCETVTDELRTLEPWKFKISYDKLVIALGAEASTFGI 187 (351)
Q Consensus 116 ~~~~~~~~~--------~~~~~~~~~~~~~~~v~~i~~~~~~v~~~~~~~~~~~~~~~~~~~~~d~lviAtG~~p~~p~i 187 (351)
+...+.... ..+.....+.++.+.....+ .+.+.+ .++. .+.||+||||||+.|..|++
T Consensus 87 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~g~a~~~~--~~~v~~---~~~~--------~~~~d~lViATGs~p~~p~~ 153 (492)
T 3ic9_A 87 VMKRIQTERDRFVGFVVESVESFDEQDKIRGFAKFLD--EHTLQV---DDHS--------QVIAKRIVIATGSRPNYPEF 153 (492)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHSCGGGEEESCEEEEE--TTEEEE---TTTE--------EEEEEEEEECCCEECCCCHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhcCeeEEEEEEEEec--CCEEEE---cCCc--------EEEeCEEEEccCCCCcCCCC
Confidence 001111100 11111122223333322222 345544 2444 89999999999999998876
Q ss_pred CCcc-ccccccCCHHHHHHHHHHHHHhhhccCCCCCCHhhhcccCeEEEECCChHHHHHHHHHHHHHHHHHHhhhcCCCC
Q 018704 188 HGVK-ENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKD 266 (351)
Q Consensus 188 ~g~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~v~VvGgG~~a~e~a~~l~~~~~~~~~~~~~~~~~ 266 (351)
++.. +.+++. .+. +.+... .++++|||||.+|+|+|..|.+++
T Consensus 154 ~~~~~~~v~t~---~~~----------~~~~~~----------~k~vvViGgG~ig~E~A~~l~~~g------------- 197 (492)
T 3ic9_A 154 LAAAGSRLLTN---DNL----------FELNDL----------PKSVAVFGPGVIGLELGQALSRLG------------- 197 (492)
T ss_dssp HHTTGGGEECH---HHH----------TTCSSC----------CSEEEEESSCHHHHHHHHHHHHTT-------------
T ss_pred CCccCCcEEcH---HHH----------hhhhhc----------CCeEEEECCCHHHHHHHHHHHHcC-------------
Confidence 6532 223222 111 112222 359999999999999999999887
Q ss_pred ccEEEEEeCC-CCCCCCcHHHHHHHHHHhhhcCcEEEcCe-EEEEeC--Ce--EEec--CC--cEEeccEEEEecCCCCc
Q 018704 267 YIHVTLIEAN-EILSSFDDRLRHYATTQLSKSGVRLVRGI-VKDVDS--QK--LILN--DG--TEVPYGLLVWSTGVGPS 336 (351)
Q Consensus 267 ~~~v~~~~~~-~~l~~~~~~~~~~~~~~l~~~gV~~~~~~-v~~v~~--~~--v~~~--~g--~~~~~D~vi~a~G~~p~ 336 (351)
.+|+++++. .+++.+++++.+.+.+.+++. |+++.+. |++++. ++ +.+. +| .++++|.||+|+|++|+
T Consensus 198 -~~Vtlv~~~~~~l~~~d~~~~~~l~~~l~~~-V~i~~~~~v~~i~~~~~~v~v~~~~~~G~~~~i~~D~Vi~a~G~~p~ 275 (492)
T 3ic9_A 198 -VIVKVFGRSGSVANLQDEEMKRYAEKTFNEE-FYFDAKARVISTIEKEDAVEVIYFDKSGQKTTESFQYVLAATGRKAN 275 (492)
T ss_dssp -CEEEEECCTTCCTTCCCHHHHHHHHHHHHTT-SEEETTCEEEEEEECSSSEEEEEECTTCCEEEEEESEEEECSCCEES
T ss_pred -CeEEEEEECCcccccCCHHHHHHHHHHHhhC-cEEEECCEEEEEEEcCCEEEEEEEeCCCceEEEECCEEEEeeCCccC
Confidence 899999997 577888999999999999988 9999995 888864 33 4443 67 67999999999999999
Q ss_pred -cc--cccCCCCCCCCC
Q 018704 337 -TL--VKSLDLPKSPGG 350 (351)
Q Consensus 337 -~~--~~~~gl~~~~~G 350 (351)
++ ++.+|++++++|
T Consensus 276 ~~~l~l~~~gl~~~~~G 292 (492)
T 3ic9_A 276 VDKLGLENTSIELDKKN 292 (492)
T ss_dssp CSSSCGGGSCCCBCTTC
T ss_pred CCCCChhhcCCEECCCC
Confidence 66 778899888776
No 76
>4gcm_A TRXR, thioredoxin reductase; FAD/NAD-linked reductases, PYR redox 2 family, structural GE joint center for structural genomics, JCSG; HET: MSE FAD NAP EPE; 1.80A {Staphylococcus aureus subsp}
Probab=99.94 E-value=7.2e-27 Score=211.79 Aligned_cols=235 Identities=15% Similarity=0.162 Sum_probs=142.3
Q ss_pred CCCcEEEECCchhHHHHHHhhhccCceEEEEcCCCccccchhhhhhhc-cccccccc--ccchhccchhhhcCCCeEEEE
Q 018704 61 EKPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRNHMVFTPLLASTCV-GTLEFRSV--AEPIARIQPAISREPGSYFFL 137 (351)
Q Consensus 61 ~~~~VvIIG~G~aGl~aA~~L~~~g~~v~vie~~~~~~~~~~~~~~~~-~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~ 137 (351)
+++||+|||||||||+||.+|++.|++|+|||+..... .+....|. +.+.+... .+...................
T Consensus 5 ~~yDvvIIG~GpAGl~aA~~l~~~g~~V~liE~~~~gG--~~~~~~~i~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (312)
T 4gcm_A 5 IDFDIAIIGAGPAGMTAAVYASRANLKTVMIERGIPGG--QMANTEEVENFPGFEMITGPDLSTKMFEHAKKFGAVYQYG 82 (312)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSCTTG--GGGGCSCBCCSTTCSSBCHHHHHHHHHHHHHHTTCEEEEC
T ss_pred CCCCEEEECCCHHHHHHHHHHHHCCCCEEEEecCCCCC--eeecccccCCcCCccccchHHHHHHHHHHHhhccccccce
Confidence 46999999999999999999999999999999854211 01111110 11111110 011111112222222233332
Q ss_pred EEeeeEeCCCCEEEEEeecCccccCCCceeEeeccEEEEecCCCcCCCCCCCccccccccCCHHHHHHHHHHHHHhhhcc
Q 018704 138 SHCAGIDTDNHVVHCETVTDELRTLEPWKFKISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLS 217 (351)
Q Consensus 138 ~~v~~i~~~~~~v~~~~~~~~~~~~~~~~~~~~~d~lviAtG~~p~~p~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 217 (351)
..+...+........ .++. ++.||+||||||+.|+.|++||.+.... ..+..........
T Consensus 83 ~~~~~~~~~~~~~~~---~~~~--------~~~~d~liiAtGs~~~~~~ipG~~~~~~--~~v~~~~~~~~~~------- 142 (312)
T 4gcm_A 83 DIKSVEDKGEYKVIN---FGNK--------ELTAKAVIIATGAEYKKIGVPGEQELGG--RGVSYCAVCDGAF------- 142 (312)
T ss_dssp CCCEEEECSSCEEEE---CSSC--------EEEEEEEEECCCEEECCCCCTTTTTTBT--TTEESCHHHHGGG-------
T ss_pred eeeeeeeeecceeec---cCCe--------EEEeceeEEcccCccCcCCCCChhhhCC--ccEEeeeccCccc-------
Confidence 333333433333322 3454 8999999999999999999999863211 1111111111110
Q ss_pred CCCCCCHhhhcccCeEEEECCChHHHHHHHHHHHHHHHHHHhhhcCCCCccEEEEEeCCC-CCCCCcHHHHHHHHHHhhh
Q 018704 218 DVPGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANE-ILSSFDDRLRHYATTQLSK 296 (351)
Q Consensus 218 ~~p~~~~~~~~~~~~v~VvGgG~~a~e~a~~l~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~l~~~~~~~~~~~~~~l~~ 296 (351)
...|+++|||||++|+|+|..|.+++ .+|+++++.+ +++.. ....+.++.
T Consensus 143 ----------~~~k~vvViGgG~ig~E~A~~l~~~g--------------~~Vtlv~~~~~~~~~~-----~~~~~~~~~ 193 (312)
T 4gcm_A 143 ----------FKNKRLFVIGGGDSAVEEGTFLTKFA--------------DKVTIVHRRDELRAQR-----ILQDRAFKN 193 (312)
T ss_dssp ----------GTTCEEEEECCSHHHHHHHHHHTTTC--------------SEEEEECSSSSCCSCH-----HHHHHHHHC
T ss_pred ----------cCCCEEEEECCCHHHHHHHHHHHhcC--------------CEEEEEecccccCcch-----hHHHHHHHh
Confidence 23469999999999999999999887 8999999975 33321 122345666
Q ss_pred cCcEEEcCe-EEEEeC--C---e--E-Ee--cCCcEEeccEEEEecCCCCc-cccccCCCCC
Q 018704 297 SGVRLVRGI-VKDVDS--Q---K--L-IL--NDGTEVPYGLLVWSTGVGPS-TLVKSLDLPK 346 (351)
Q Consensus 297 ~gV~~~~~~-v~~v~~--~---~--v-~~--~~g~~~~~D~vi~a~G~~p~-~~~~~~gl~~ 346 (351)
.++...... +..... . . . .. .++..+++|.|++++|..|+ .+++.+++..
T Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~v~~~~g~~~~~~~~~~~g~~~ 255 (312)
T 4gcm_A 194 DKIDFIWSHTLKSINEKDGKVGSVTLTSTKDGSEETHEADGVFIYIGMKPLTAPFKDLGITN 255 (312)
T ss_dssp TTEEEECSEEEEEEEEETTEEEEEEEEETTTCCEEEEECSEEEECSCEEESCGGGGGGTCBC
T ss_pred cCcceeeecceeeeeccccccccceeeeecCCceeEEeeeeEEeecCCCcCchhHHhcceec
Confidence 778877774 333321 1 1 1 11 23456899999999999999 7777777653
No 77
>3uox_A Otemo; baeyer-villiger monooxygenase, oxidoreductase; HET: FAD; 1.96A {Pseudomonas putida} PDB: 3uov_A* 3uoy_A* 3uoz_A* 3up4_A* 3up5_A*
Probab=99.94 E-value=3.3e-27 Score=229.13 Aligned_cols=179 Identities=15% Similarity=0.119 Sum_probs=107.4
Q ss_pred CCCcEEEECCchhHHHHHHhhhccCceEEEEcCCCccccchhh---hhhhccc----------------ccccc---ccc
Q 018704 61 EKPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRNHMVFTPLL---ASTCVGT----------------LEFRS---VAE 118 (351)
Q Consensus 61 ~~~~VvIIG~G~aGl~aA~~L~~~g~~v~vie~~~~~~~~~~~---~~~~~~~----------------~~~~~---~~~ 118 (351)
..+||||||||++|+++|..|++.|++|+|||+++.+...... ++..... ..+.. ...
T Consensus 8 ~~~dVvIIGaG~aGl~aA~~L~~~g~~v~iiE~~~~~GGtw~~~~yPg~~~d~~~~~y~~~f~~~~~~~~~~~~~~~~~~ 87 (545)
T 3uox_A 8 PALDAVVIGAGVTGIYQAFLINQAGMKVLGIEAGEDVGGTWYWNRYPGCRLDTESYAYGYFALKGIIPEWEWSENFASQP 87 (545)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTHHHHCCCTTCBCSSCHHHHCHHHHTTSSTTCCCSBSSCBHH
T ss_pred CCCCEEEECccHHHHHHHHHHHhCCCCEEEEeCCCCCCCccccCCCCceeecCchhhcccccCcccccCCCccccCCCHH
Confidence 4579999999999999999999999999999998754221100 0000000 00000 011
Q ss_pred chhccchhhhcCCC---eEEEEEEeeeEeCCC--CEEEEEeecCccccCCCceeEeeccEEEEecC--CCcCCCCCCCcc
Q 018704 119 PIARIQPAISREPG---SYFFLSHCAGIDTDN--HVVHCETVTDELRTLEPWKFKISYDKLVIALG--AEASTFGIHGVK 191 (351)
Q Consensus 119 ~~~~~~~~~~~~~~---~~~~~~~v~~i~~~~--~~v~~~~~~~~~~~~~~~~~~~~~d~lviAtG--~~p~~p~i~g~~ 191 (351)
.+..+...+....+ ...+..+|+.++.+. ..|.++. .+|+ ++.||+||+||| +.|+.|++||.+
T Consensus 88 ei~~yl~~~~~~~~l~~~i~~~~~V~~~~~~~~~~~w~V~~-~~G~--------~~~ad~lV~AtG~~s~p~~p~ipG~~ 158 (545)
T 3uox_A 88 EMLRYVNRAADAMDVRKHYRFNTRVTAARYVENDRLWEVTL-DNEE--------VVTCRFLISATGPLSASRMPDIKGID 158 (545)
T ss_dssp HHHHHHHHHHHHHTCGGGEECSCCEEEEEEEGGGTEEEEEE-TTTE--------EEEEEEEEECCCSCBC---CCCTTGG
T ss_pred HHHHHHHHHHHHcCCcCcEEECCEEEEEEEeCCCCEEEEEE-CCCC--------EEEeCEEEECcCCCCCCcCCCCCCcc
Confidence 11222222222222 223455777776544 4666644 4565 899999999999 789999999986
Q ss_pred cc---ccccCCHHHHHHHHHHHHHhhhccCCCCCCHhhhcccCeEEEECCChHHHHHHHHHHHHHHHHHHhhhcCCCCcc
Q 018704 192 EN---ATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYI 268 (351)
Q Consensus 192 ~~---~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~v~VvGgG~~a~e~a~~l~~~~~~~~~~~~~~~~~~~ 268 (351)
.. .++...+.+. ....|. .....+|+|+|||+|.+|+|+|..|++.+ .
T Consensus 159 ~f~g~~~h~~~~~~~------------~~~~~~---~~~~~~krV~VIG~G~tgve~a~~la~~~--------------~ 209 (545)
T 3uox_A 159 SFKGESFHSSRWPTD------------AEGAPK---GVDFTGKRVGVIGTGATGVQIIPIAAETA--------------K 209 (545)
T ss_dssp GCCSEEEEGGGCCBC------------TTSCBS---CCCCBTCEEEEECCSHHHHHHHHHHTTTB--------------S
T ss_pred ccCCCeEEccccccc------------cccccc---ccccCCCeEEEECCCccHHHHHHHHHhhC--------------C
Confidence 31 2222111000 000000 01134579999999999999999998766 8
Q ss_pred EEEEEeCCC
Q 018704 269 HVTLIEANE 277 (351)
Q Consensus 269 ~v~~~~~~~ 277 (351)
+|++++|.+
T Consensus 210 ~Vtv~~r~~ 218 (545)
T 3uox_A 210 ELYVFQRTP 218 (545)
T ss_dssp EEEEEESSC
T ss_pred EEEEEEcCC
Confidence 999999974
No 78
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=99.94 E-value=1.1e-26 Score=215.37 Aligned_cols=234 Identities=16% Similarity=0.192 Sum_probs=154.5
Q ss_pred CCcEEEECCchhHHHHHHhhhccCc-eEEEEcCCCcccc------------chhhhhhhccccccc--------------
Q 018704 62 KPRVVVLGSGWAGCRLMKGIDTSLY-DVVCVSPRNHMVF------------TPLLASTCVGTLEFR-------------- 114 (351)
Q Consensus 62 ~~~VvIIG~G~aGl~aA~~L~~~g~-~v~vie~~~~~~~------------~~~~~~~~~~~~~~~-------------- 114 (351)
.+||+|||||++|+++|..|++.|+ +|+|||+++ ... .+.+.....+.....
T Consensus 4 ~~~vvIIGaG~aGl~aA~~l~~~g~~~v~lie~~~-~Gg~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 82 (369)
T 3d1c_A 4 HHKVAIIGAGAAGIGMAITLKDFGITDVIILEKGT-VGHSFKHWPKSTRTITPSFTSNGFGMPDMNAISMDTSPAFTFNE 82 (369)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCCEEEECSSS-TTHHHHTSCTTCBCSSCCCCCGGGTCCCTTCSSTTCCHHHHHCC
T ss_pred cCcEEEECcCHHHHHHHHHHHHcCCCcEEEEecCC-CCCccccCcccccccCcchhcccCCchhhhhccccccccccccc
Confidence 4799999999999999999999999 999999986 110 000000000110000
Q ss_pred c--cccchhccchhhhcCCCeEEEE-EEeeeEeCCCCEEEEEeecCccccCCCceeEeeccEEEEecCCCcCCCCCCCcc
Q 018704 115 S--VAEPIARIQPAISREPGSYFFL-SHCAGIDTDNHVVHCETVTDELRTLEPWKFKISYDKLVIALGAEASTFGIHGVK 191 (351)
Q Consensus 115 ~--~~~~~~~~~~~~~~~~~~~~~~-~~v~~i~~~~~~v~~~~~~~~~~~~~~~~~~~~~d~lviAtG~~p~~p~i~g~~ 191 (351)
. ....+..+...+....++.++. .+|+.++.+.+.+.+.. .+ . .+.||+||+|||..+. |.+|+
T Consensus 83 ~~~~~~~~~~~l~~~~~~~gv~i~~~~~v~~i~~~~~~~~v~~-~~-g--------~~~~d~vVlAtG~~~~-p~ip~-- 149 (369)
T 3d1c_A 83 EHISGETYAEYLQVVANHYELNIFENTVVTNISADDAYYTIAT-TT-E--------TYHADYIFVATGDYNF-PKKPF-- 149 (369)
T ss_dssp SSCBHHHHHHHHHHHHHHTTCEEECSCCEEEEEECSSSEEEEE-SS-C--------CEEEEEEEECCCSTTS-BCCCS--
T ss_pred cCCCHHHHHHHHHHHHHHcCCeEEeCCEEEEEEECCCeEEEEe-CC-C--------EEEeCEEEECCCCCCc-cCCCC--
Confidence 0 0011112222233344666655 47888988765565543 22 2 6899999999999865 55666
Q ss_pred ccccccCCHHHHHHHHHHHHHhhhccCCCCCCHhhhcccCeEEEECCChHHHHHHHHHHHHHHHHHHhhhcCCCCccEEE
Q 018704 192 ENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVT 271 (351)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~v~VvGgG~~a~e~a~~l~~~~~~~~~~~~~~~~~~~~v~ 271 (351)
+..++...+.+. ...+.++|+|||+|.+|+|+|..|.+.+ .+|+
T Consensus 150 ~~~~~~~~~~~~----------------------~~~~~~~vvVvG~G~~g~e~a~~l~~~g--------------~~V~ 193 (369)
T 3d1c_A 150 KYGIHYSEIEDF----------------------DNFNKGQYVVIGGNESGFDAAYQLAKNG--------------SDIA 193 (369)
T ss_dssp SSCEEGGGCSCG----------------------GGSCSSEEEEECCSHHHHHHHHHHHHTT--------------CEEE
T ss_pred CceechhhcCCh----------------------hhcCCCEEEEECCCcCHHHHHHHHHhcC--------------CeEE
Confidence 233332222111 0123469999999999999999999876 8999
Q ss_pred EEeCCC-CCC-------CCcHHHHHHHHHHhhhcC-cEEEcCe-EEEE--eCC--eEEecCCcEEe-ccEEEEecCCCCc
Q 018704 272 LIEANE-ILS-------SFDDRLRHYATTQLSKSG-VRLVRGI-VKDV--DSQ--KLILNDGTEVP-YGLLVWSTGVGPS 336 (351)
Q Consensus 272 ~~~~~~-~l~-------~~~~~~~~~~~~~l~~~g-V~~~~~~-v~~v--~~~--~v~~~~g~~~~-~D~vi~a~G~~p~ 336 (351)
++++.+ +++ .+++.+.+.+.+.+++.| |+++.+. |.++ +++ .+.+.+|++++ +|.||+|+|++|+
T Consensus 194 lv~~~~~~~~~~~d~~~~~~~~~~~~l~~~l~~~g~v~~~~~~~v~~i~~~~~~~~v~~~~g~~~~~~d~vi~a~G~~~~ 273 (369)
T 3d1c_A 194 LYTSTTGLNDPDADPSVRLSPYTRQRLGNVIKQGARIEMNVHYTVKDIDFNNGQYHISFDSGQSVHTPHEPILATGFDAT 273 (369)
T ss_dssp EECC----------CTTSCCHHHHHHHHHHHHTTCCEEEECSCCEEEEEEETTEEEEEESSSCCEEESSCCEECCCBCGG
T ss_pred EEecCCCCCCCCCCCCccCCHHHHHHHHHHHhhCCcEEEecCcEEEEEEecCCceEEEecCCeEeccCCceEEeeccCCc
Confidence 999974 332 245677788888899997 9999994 9998 444 46778898775 6999999999999
Q ss_pred -cccccCCCC
Q 018704 337 -TLVKSLDLP 345 (351)
Q Consensus 337 -~~~~~~gl~ 345 (351)
+++.+.+++
T Consensus 274 ~~~~~~~~~~ 283 (369)
T 3d1c_A 274 KNPIVQQLFV 283 (369)
T ss_dssp GSHHHHHHSC
T ss_pred cchhhhhhcc
Confidence 466543444
No 79
>4ap3_A Steroid monooxygenase; oxidoreductase, baeyer-villiger; HET: FAD NAP; 2.39A {Rhodococcus rhodochrous} PDB: 4aox_A* 4aos_A* 4ap1_A*
Probab=99.94 E-value=6.5e-27 Score=227.24 Aligned_cols=236 Identities=14% Similarity=0.130 Sum_probs=154.8
Q ss_pred CCCcEEEECCchhHHHHHHhhhccCceEEEEcCCCccccchhh---hhhhcccc----------------cc---ccccc
Q 018704 61 EKPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRNHMVFTPLL---ASTCVGTL----------------EF---RSVAE 118 (351)
Q Consensus 61 ~~~~VvIIG~G~aGl~aA~~L~~~g~~v~vie~~~~~~~~~~~---~~~~~~~~----------------~~---~~~~~ 118 (351)
..+||||||||++|+++|..|++.|++|+|||+++........ ++.....+ .+ .....
T Consensus 20 ~~~dVvIIGaG~aGl~aA~~L~~~G~~v~iiE~~~~~GGtw~~~~ypg~~~dv~s~~y~~~f~~~~~~~~~~~~~~~~~~ 99 (549)
T 4ap3_A 20 TSYDVVVVGAGIAGLYAIHRFRSQGLTVRAFEAASGVGGVWYWNRYPGARCDVESIDYSYSFSPELEQEWNWSEKYATQP 99 (549)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTHHHHCCCTTCBCSSCTTTSSCCSCHHHHHHCCCSSSSCBHH
T ss_pred CCCCEEEECchHHHHHHHHHHHhCCCCEEEEeCCCCCCCccccCCCCCceeCCCchhcccccccccccCCCCccCCCCHH
Confidence 3579999999999999999999999999999997754321110 01100000 00 00011
Q ss_pred chhccchhhhcCCCe---EEEEEEeeeEeCCCC--EEEEEeecCccccCCCceeEeeccEEEEecC--CCcCCCCCCCcc
Q 018704 119 PIARIQPAISREPGS---YFFLSHCAGIDTDNH--VVHCETVTDELRTLEPWKFKISYDKLVIALG--AEASTFGIHGVK 191 (351)
Q Consensus 119 ~~~~~~~~~~~~~~~---~~~~~~v~~i~~~~~--~v~~~~~~~~~~~~~~~~~~~~~d~lviAtG--~~p~~p~i~g~~ 191 (351)
.+..+........++ ..+..+|+.++.+.. .|.++. .+|+ ++.||+||+||| +.|+.|.+||.+
T Consensus 100 ei~~yl~~~~~~~g~~~~i~~~~~V~~i~~~~~~~~w~V~~-~~G~--------~i~ad~lV~AtG~~s~p~~p~ipG~~ 170 (549)
T 4ap3_A 100 EILAYLEHVADRFDLRRDIRFDTRVTSAVLDEEGLRWTVRT-DRGD--------EVSARFLVVAAGPLSNANTPAFDGLD 170 (549)
T ss_dssp HHHHHHHHHHHHTTCGGGEECSCCEEEEEEETTTTEEEEEE-TTCC--------EEEEEEEEECCCSEEECCCCCCTTGG
T ss_pred HHHHHHHHHHHHcCCCccEEECCEEEEEEEcCCCCEEEEEE-CCCC--------EEEeCEEEECcCCCCCCCCCCCCCcc
Confidence 122222222222232 334557888876554 666654 4565 799999999999 679999999986
Q ss_pred cc---ccccCCHH-HHHHHHHHHHHhhhccCCCCCCHhhhcccCeEEEECCChHHHHHHHHHHHHHHHHHHhhhcCCCCc
Q 018704 192 EN---ATFLREVH-HAQEIRRKLLLNLMLSDVPGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDY 267 (351)
Q Consensus 192 ~~---~~~~~~~~-~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~v~VvGgG~~a~e~a~~l~~~~~~~~~~~~~~~~~~ 267 (351)
.. .++...+. +.. ...+|+|+|||+|.+|+|+|..|++.+
T Consensus 171 ~f~g~~~~~~~~~~~~~----------------------~~~~krV~VIG~G~sgve~a~~l~~~~-------------- 214 (549)
T 4ap3_A 171 RFTGDIVHTARWPHDGV----------------------DFTGKRVGVIGTGSSGIQSIPIIAEQA-------------- 214 (549)
T ss_dssp GCCSEEEEGGGCCTTCC----------------------CCBTCEEEEECCSHHHHHHHHHHHHHB--------------
T ss_pred cCCCceEEecccccccc----------------------ccCCCEEEEECCCchHHHHHHHHHhhC--------------
Confidence 32 23322211 100 024469999999999999999999877
Q ss_pred cEEEEEeCCCC--CCCCcH----HHHHHH---------------------------------------------------
Q 018704 268 IHVTLIEANEI--LSSFDD----RLRHYA--------------------------------------------------- 290 (351)
Q Consensus 268 ~~v~~~~~~~~--l~~~~~----~~~~~~--------------------------------------------------- 290 (351)
.+|++++|.+. ++..+. ...+.+
T Consensus 215 ~~Vtv~~r~~~~ilp~~~~~~~~~~~~~l~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~e~r~~~~e~~~~~~~~~~~ 294 (549)
T 4ap3_A 215 EQLFVFQRSANYSIPAGNVPLDDATRAEQKANYAERRRLSRESGGGSPHRPHPKSALEVSEEERRAVYEERWKLGGVLFS 294 (549)
T ss_dssp SEEEEEESSCCCEEECC----CHHHHHHHHHTHHHHHHHHHHSSSSSSCCCCSSCTTSSCHHHHHHHHHHHHHHCHHHHT
T ss_pred CEEEEEECCCCccccCcCCCCCHHHHHHHHhccHHHHHHHHhhccccccccCccchhcCCHHHHHHHHHHHHhhcchHHH
Confidence 89999999752 332221 111000
Q ss_pred --------------------H-----------------------------------HHhhhcCcEEE---cCeEEEEeCC
Q 018704 291 --------------------T-----------------------------------TQLSKSGVRLV---RGIVKDVDSQ 312 (351)
Q Consensus 291 --------------------~-----------------------------------~~l~~~gV~~~---~~~v~~v~~~ 312 (351)
. +.+.+.+|+++ ...|++++++
T Consensus 295 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~d~~~~~~l~P~~~~~~~kR~~~~~~y~~al~~~~V~lvd~~~~~I~~it~~ 374 (549)
T 4ap3_A 295 KAFPDQLTDPAANDTARAFWEEKIRAVVDDPAVAELLTPKDHAIGAKRIVLDSGYYETYNRDNVELVDLRSTPIVGMDET 374 (549)
T ss_dssp TSSTTTTTCHHHHHHHHHHHHHHHHHHCSCHHHHHHHSCSSCCBTTBCCEEESSTGGGGGSTTEEEEETTTSCEEEEETT
T ss_pred hhhhhhhcCHHHHHHHHHHHHHHHHHHcCCHHHHHhCCCCCCCCCccccCCCccHHHHhcCCCEEEEeCCCCCceEEeCC
Confidence 0 01224489998 6679999999
Q ss_pred eEEecCCcEEeccEEEEecCCCCcc-ccccC
Q 018704 313 KLILNDGTEVPYGLLVWSTGVGPST-LVKSL 342 (351)
Q Consensus 313 ~v~~~~g~~~~~D~vi~a~G~~p~~-~~~~~ 342 (351)
+|+++|| ++++|+||+|||++++. ++..+
T Consensus 375 gv~~~dG-~~~~D~iI~ATGf~~~~~~~~~~ 404 (549)
T 4ap3_A 375 GIVTTGA-HYDLDMIVLATGFDAMTGSLDKL 404 (549)
T ss_dssp EEEESSC-EEECSEEEECCCEEESSTTGGGS
T ss_pred cEEeCCC-ceecCEEEECCcccccccccCce
Confidence 9999999 99999999999999884 66554
No 80
>2gv8_A Monooxygenase; FMO, FAD, NADPH, cofactor complex, PSI, structura genomics, protein structure initiative; HET: FAD NDP; 2.10A {Schizosaccharomyces pombe} SCOP: c.3.1.5 c.3.1.5 PDB: 2gvc_A* 1vqw_A*
Probab=99.94 E-value=1.2e-26 Score=220.79 Aligned_cols=226 Identities=15% Similarity=0.083 Sum_probs=148.6
Q ss_pred CCCcEEEECCchhHHHHHHhhhccCc--eEEEEcCCCccccchhhhhhh----------------------------ccc
Q 018704 61 EKPRVVVLGSGWAGCRLMKGIDTSLY--DVVCVSPRNHMVFTPLLASTC----------------------------VGT 110 (351)
Q Consensus 61 ~~~~VvIIG~G~aGl~aA~~L~~~g~--~v~vie~~~~~~~~~~~~~~~----------------------------~~~ 110 (351)
+.+||+|||||++||++|..|++.|. +|+|||+++............ ...
T Consensus 5 ~~~dV~IIGaG~aGl~aA~~L~~~G~~~~V~v~E~~~~~GG~~~~~~~~~~~~~ip~~~~~~~~~~~~~g~~~~~~~~~~ 84 (447)
T 2gv8_A 5 TIRKIAIIGAGPSGLVTAKALLAEKAFDQVTLFERRGSPGGVWNYTSTLSNKLPVPSTNPILTTEPIVGPAALPVYPSPL 84 (447)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHTTTCCSEEEEECSSSSSSTTCSCCSCCCSCCCSSBCCTTCCCCCBCCSSSCCBCCCCC
T ss_pred CCCEEEEECccHHHHHHHHHHHhcCCCCCeEEEecCCCCCCeecCCCCCCcccccccccccccccccccccccCCccCch
Confidence 35899999999999999999999999 999999876442110000000 000
Q ss_pred c------------ccccc-----------ccchhccchhhhcCCC-eEEEEEEeeeEeCCCCEEEEEeec--CccccCCC
Q 018704 111 L------------EFRSV-----------AEPIARIQPAISREPG-SYFFLSHCAGIDTDNHVVHCETVT--DELRTLEP 164 (351)
Q Consensus 111 ~------------~~~~~-----------~~~~~~~~~~~~~~~~-~~~~~~~v~~i~~~~~~v~~~~~~--~~~~~~~~ 164 (351)
. .+..+ ...+.++...+....+ ...+..+|+.++...+.|.++..+ ++.
T Consensus 85 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~i~~~t~V~~v~~~~~~~~V~~~~~~~G~----- 159 (447)
T 2gv8_A 85 YRDLQTNTPIELMGYCDQSFKPQTLQFPHRHTIQEYQRIYAQPLLPFIKLATDVLDIEKKDGSWVVTYKGTKAGS----- 159 (447)
T ss_dssp CTTCBCSSCHHHHSCTTCCCCTTCCSSCBHHHHHHHHHHHHGGGGGGEECSEEEEEEEEETTEEEEEEEESSTTC-----
T ss_pred hhhhccCCCHHHhccCCCCCCCCCCCCCCHHHHHHHHHHHHHHhhCeEEeCCEEEEEEeCCCeEEEEEeecCCCC-----
Confidence 0 00000 0011111111111112 233467888888777766665432 121
Q ss_pred ceeEeeccEEEEecCC--CcCCCCCCCcccc-------ccccCCHHHHHHHHHHHHHhhhccCCCCCCHhhhcccCeEEE
Q 018704 165 WKFKISYDKLVIALGA--EASTFGIHGVKEN-------ATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEKSRLLHCVV 235 (351)
Q Consensus 165 ~~~~~~~d~lviAtG~--~p~~p~i~g~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~v~V 235 (351)
+..++.||+||+|||. .|+.|.+||.++. ++++..+.+.. ...+++|+|
T Consensus 160 ~~~~~~~d~VVvAtG~~s~p~~p~i~G~~~~~~~~~g~v~~~~~~~~~~----------------------~~~~k~VvV 217 (447)
T 2gv8_A 160 PISKDIFDAVSICNGHYEVPYIPNIKGLDEYAKAVPGSVLHSSLFREPE----------------------LFVGESVLV 217 (447)
T ss_dssp CEEEEEESEEEECCCSSSSBCBCCCBTHHHHHHHSTTSEEEGGGCCCGG----------------------GGTTCCEEE
T ss_pred eeEEEEeCEEEECCCCCCCCCCCCCCChhhhhccCCccEEEecccCChh----------------------hcCCCEEEE
Confidence 0126899999999998 6899999997521 33332222211 123469999
Q ss_pred ECCChHHHHHHHHHHHHHHHHHHhhhcCCCCccE-EEEEeCCCCCCCCcHHHHHHHHHHhhhcCcEEEcCeEEEEe--CC
Q 018704 236 VGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIH-VTLIEANEILSSFDDRLRHYATTQLSKSGVRLVRGIVKDVD--SQ 312 (351)
Q Consensus 236 vGgG~~a~e~a~~l~~~~~~~~~~~~~~~~~~~~-v~~~~~~~~l~~~~~~~~~~~~~~l~~~gV~~~~~~v~~v~--~~ 312 (351)
||+|++|+|+|..|.+.+ .+ |++++|+..+ ++..||++. ..|+++. +.
T Consensus 218 vG~G~sg~e~A~~l~~~~--------------~~~V~l~~r~~~~--------------l~~~~i~~~-~~v~~~~~~~~ 268 (447)
T 2gv8_A 218 VGGASSANDLVRHLTPVA--------------KHPIYQSLLGGGD--------------IQNESLQQV-PEITKFDPTTR 268 (447)
T ss_dssp ECSSHHHHHHHHHHTTTS--------------CSSEEEECTTCCS--------------CBCSSEEEE-CCEEEEETTTT
T ss_pred EccCcCHHHHHHHHHHHh--------------CCcEEEEeCCCCc--------------CCCCCeEEe-cCeEEEecCCC
Confidence 999999999999999876 77 9999997432 455678743 3588884 46
Q ss_pred eEEecCCcE-EeccEEEEecCCCCc-cc-----cccC
Q 018704 313 KLILNDGTE-VPYGLLVWSTGVGPS-TL-----VKSL 342 (351)
Q Consensus 313 ~v~~~~g~~-~~~D~vi~a~G~~p~-~~-----~~~~ 342 (351)
+|++.||++ +++|.||+|||++|+ +| ++.+
T Consensus 269 ~v~~~dG~~~~~~D~vi~atG~~~~~~~l~~~~l~~~ 305 (447)
T 2gv8_A 269 EIYLKGGKVLSNIDRVIYCTGYLYSVPFPSLAKLKSP 305 (447)
T ss_dssp EEEETTTEEECCCSEEEECCCBCCCCCCHHHHSCCST
T ss_pred EEEECCCCEeccCCEEEECCCCCcCCCCCcccccccc
Confidence 899999987 799999999999999 89 8765
No 81
>3s5w_A L-ornithine 5-monooxygenase; class B flavin dependent N-hydroxylating monooxygenase, CLAS flavin dependent monooxygenase N-hydroxylating; HET: FAD ONH NAP; 1.90A {Pseudomonas aeruginosa} PDB: 3s61_A*
Probab=99.93 E-value=1.8e-25 Score=213.60 Aligned_cols=245 Identities=12% Similarity=0.123 Sum_probs=151.2
Q ss_pred CCCcEEEECCchhHHHHHHhhhccC-----ceEEEEcCCCccccchhhh--hhhcc---------------ccc------
Q 018704 61 EKPRVVVLGSGWAGCRLMKGIDTSL-----YDVVCVSPRNHMVFTPLLA--STCVG---------------TLE------ 112 (351)
Q Consensus 61 ~~~~VvIIG~G~aGl~aA~~L~~~g-----~~v~vie~~~~~~~~~~~~--~~~~~---------------~~~------ 112 (351)
..+||+|||||++||++|..|++.| .+|+|||+++.+.|.+... ..... ...
T Consensus 29 ~~~dVvIIGaG~aGl~aA~~L~~~g~~~~~~~v~liE~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~p~~~~~~~~~l~ 108 (463)
T 3s5w_A 29 VVHDLIGVGFGPSNIALAIALQERAQAQGALEVLFLDKQGDYRWHGNTLVSQSELQISFLKDLVSLRNPTSPYSFVNYLH 108 (463)
T ss_dssp CEESEEEECCSHHHHHHHHHHHHHHHHHCCCCEEEEESCSSCCSSGGGCCSSCBCSSCTTSSSSTTTCTTCTTSHHHHHH
T ss_pred CcCCEEEECCCHHHHHHHHHHHhcccccCcccEEEEecCCCCCCcCCCCCCCCcCCcchhhccccccCCCCCCChhHhhh
Confidence 3479999999999999999999999 9999999998776553211 00000 000
Q ss_pred -------------ccccccchhccchhhhcCCCeE-EEEEEeeeEeCC---CCEE--EEEeecC-ccccCCCceeEeecc
Q 018704 113 -------------FRSVAEPIARIQPAISREPGSY-FFLSHCAGIDTD---NHVV--HCETVTD-ELRTLEPWKFKISYD 172 (351)
Q Consensus 113 -------------~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~i~~~---~~~v--~~~~~~~-~~~~~~~~~~~~~~d 172 (351)
.......+.++...+....+.. .+..+|+.++.+ .+.+ .+...+. ++ ..++.||
T Consensus 109 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~i~~~~~V~~i~~~~~~~~~~~~~V~~~~g~g~------~~~~~~d 182 (463)
T 3s5w_A 109 KHDRLVDFINLGTFYPCRMEFNDYLRWVASHFQEQSRYGEEVLRIEPMLSAGQVEALRVISRNADGE------ELVRTTR 182 (463)
T ss_dssp HTTCHHHHHHHCCSCCBHHHHHHHHHHHHTTCTTTEEESEEEEEEEEEEETTEEEEEEEEEEETTSC------EEEEEES
T ss_pred hcCceeecccccCCCCCHHHHHHHHHHHHHHcCCeEEeCCEEEEEEEecCCCceEEEEEEEecCCCc------eEEEEeC
Confidence 0000111222222233333433 344678888876 4432 4433222 22 2378999
Q ss_pred EEEEecCCCcCCCC-CCCccc--cccccCCHHHH-HHHHHHHHHhhhccCCCCCCHhhhcccCeEEEECCChHHHHHHHH
Q 018704 173 KLVIALGAEASTFG-IHGVKE--NATFLREVHHA-QEIRRKLLLNLMLSDVPGISEEEKSRLLHCVVVGGGPTGVEFSGE 248 (351)
Q Consensus 173 ~lviAtG~~p~~p~-i~g~~~--~~~~~~~~~~~-~~~~~~~~~~~~~~~~p~~~~~~~~~~~~v~VvGgG~~a~e~a~~ 248 (351)
+||+|||+.|..|. +++... .+++...+.+. ..+.. .....++|+|||||.+|+|+|..
T Consensus 183 ~lVlAtG~~p~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------------~~~~~~~vvVvGgG~sg~e~a~~ 245 (463)
T 3s5w_A 183 ALVVSPGGTPRIPQVFRALKGDGRVFHHSQYLEHMAKQPC-----------------SSGKPMKIAIIGGGQSAAEAFID 245 (463)
T ss_dssp EEEECCCCEECCCGGGGGGTTCTTEEEGGGHHHHHCC------------------------CEEEEEECCSHHHHHHHHH
T ss_pred EEEECCCCCCCCcchhhhcCCCCcEEECHHHHhhHHHhhh-----------------cccCCCeEEEECCCHhHHHHHHH
Confidence 99999999888775 333322 33443333221 11110 00234699999999999999999
Q ss_pred HHHH--HHHHHHhhhcCCCCccEEEEEeCCC-CCCC--------------------CcHHHHHHHHHHhhh---------
Q 018704 249 LSDF--IMRDVRQRYSHVKDYIHVTLIEANE-ILSS--------------------FDDRLRHYATTQLSK--------- 296 (351)
Q Consensus 249 l~~~--~~~~~~~~~~~~~~~~~v~~~~~~~-~l~~--------------------~~~~~~~~~~~~l~~--------- 296 (351)
|.+. + .+|++++|.. +++. ++++....+.+.+..
T Consensus 246 l~~~~~~--------------~~Vt~v~r~~~~~p~~~~~~~~~~~~p~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 311 (463)
T 3s5w_A 246 LNDSYPS--------------VQADMILRASALKPADDSPFVNEVFAPKFTDLIYSREHAERERLLREYHNTNYSVVDTD 311 (463)
T ss_dssp HHHHCTT--------------EEEEEECSSSSCCBCCCCHHHHGGGSHHHHHHHHHSCHHHHHHHHHHTGGGTSSCBCHH
T ss_pred HHhcCCC--------------CeEEEEEeCCCCcCccCCccchhccChhHHHHHhcCCHHHHHHHHHHhhccCCCcCCHH
Confidence 9987 4 8999999975 4331 122222233333222
Q ss_pred -----------------cCcEEEcCe-EEEEeC--Ce--EEec---CCcE--EeccEEEEecCCCCc---cccccC
Q 018704 297 -----------------SGVRLVRGI-VKDVDS--QK--LILN---DGTE--VPYGLLVWSTGVGPS---TLVKSL 342 (351)
Q Consensus 297 -----------------~gV~~~~~~-v~~v~~--~~--v~~~---~g~~--~~~D~vi~a~G~~p~---~~~~~~ 342 (351)
.||+++.+. |++++. ++ +.+. +|++ +++|.||+|||++|+ +++..+
T Consensus 312 ~~~~~~~~l~~~~~~~~~~v~i~~~~~v~~v~~~~~~~~v~~~~~~~g~~~~~~~D~Vv~AtG~~p~~~~~~l~~l 387 (463)
T 3s5w_A 312 LIERIYGVFYRQKVSGIPRHAFRCMTTVERATATAQGIELALRDAGSGELSVETYDAVILATGYERQLHRQLLEPL 387 (463)
T ss_dssp HHHHHHHHHHHHHHHCCCCSEEETTEEEEEEEEETTEEEEEEEETTTCCEEEEEESEEEECCCEECCC-CTTTGGG
T ss_pred HHHHHHHHHHHHHhcCCCCeEEEeCCEEEEEEecCCEEEEEEEEcCCCCeEEEECCEEEEeeCCCCCCccchhHHH
Confidence 599999995 888865 33 5555 6764 899999999999998 566654
No 82
>2vdc_G Glutamate synthase [NADPH] small chain; oxidoreductase, amidotransferase, ammonia assimilation, iron, zymogen; HET: OMT FMN AKG FAD; 9.50A {Azospirillum brasilense}
Probab=99.93 E-value=3.9e-26 Score=216.90 Aligned_cols=244 Identities=15% Similarity=0.157 Sum_probs=151.6
Q ss_pred CCCCcEEEECCchhHHHHHHhhhccCceEEEEcCCCccccchhhhhhhcccccccccccchhccchhhhcCCCeEEEEEE
Q 018704 60 NEKPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRNHMVFTPLLASTCVGTLEFRSVAEPIARIQPAISREPGSYFFLSH 139 (351)
Q Consensus 60 ~~~~~VvIIG~G~aGl~aA~~L~~~g~~v~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 139 (351)
...+||+|||||||||++|..|++.|++|+|||+.+.+... +. .+.+.+. +...+......+....++.++...
T Consensus 120 ~~~~~V~IIGgGpAGl~aA~~L~~~G~~V~v~e~~~~~GG~--l~---~gip~~~-~~~~~~~~~~~~l~~~gv~~~~~~ 193 (456)
T 2vdc_G 120 ELGLSVGVIGAGPAGLAAAEELRAKGYEVHVYDRYDRMGGL--LV---YGIPGFK-LEKSVVERRVKLLADAGVIYHPNF 193 (456)
T ss_dssp SCCCCEEEECCSHHHHHHHHHHHHHTCCEEEECSSSSCSTH--HH---HTSCTTT-SCHHHHHHHHHHHHHTTCEEETTC
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHCCCeEEEEeccCCCCCe--ee---ecCCCcc-CCHHHHHHHHHHHHHCCcEEEeCC
Confidence 45689999999999999999999999999999998764321 11 1222221 112222222222333466665543
Q ss_pred eeeEeCCCCEEEEEeecCccccCCCceeEeeccEEEEecCCC-cCCCCCCCcc-ccccccCCHHHHHHHHHHHHHhhhcc
Q 018704 140 CAGIDTDNHVVHCETVTDELRTLEPWKFKISYDKLVIALGAE-ASTFGIHGVK-ENATFLREVHHAQEIRRKLLLNLMLS 217 (351)
Q Consensus 140 v~~i~~~~~~v~~~~~~~~~~~~~~~~~~~~~d~lviAtG~~-p~~p~i~g~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 217 (351)
..+ +.+.+ ++. .+.||+||+|||+. |+.+++||.+ +.+++. ..+...........
T Consensus 194 ~v~-----~~v~~---~~~---------~~~~d~vvlAtG~~~~~~~~ipG~~~~gv~~a------~~~l~~~~~~~~~~ 250 (456)
T 2vdc_G 194 EVG-----RDASL---PEL---------RRKHVAVLVATGVYKARDIKAPGSGLGNIVAA------LDYLTTSNKVSLGD 250 (456)
T ss_dssp CBT-----TTBCH---HHH---------HSSCSEEEECCCCCEECCTTCSCCTTTTEEEH------HHHHHHHHHHHCTT
T ss_pred Eec-----cEEEh---hHh---------HhhCCEEEEecCCCCCCCCCCCCCcCCCcEEH------HHHHHHhhhhhccc
Confidence 321 11211 111 46799999999997 7888999975 223321 11111111000000
Q ss_pred CCCCCC-HhhhcccCeEEEECCChHHHHHHHHHHHHHHHHHHhhhcCCCCccEEEEEeCCC-C-CCCCcHHHHHHHHHHh
Q 018704 218 DVPGIS-EEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANE-I-LSSFDDRLRHYATTQL 294 (351)
Q Consensus 218 ~~p~~~-~~~~~~~~~v~VvGgG~~a~e~a~~l~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~-l~~~~~~~~~~~~~~l 294 (351)
..+... +.....+|+|+|||||++|+|+|..+.+.+. .+|++++|+. . ++..+.+ .+.+
T Consensus 251 ~~~~~~~g~~~~~gk~VvVIGgG~~a~d~A~~~~r~Ga-------------~~Vtiv~r~~~~~~p~~~~e-----~~~~ 312 (456)
T 2vdc_G 251 TVEAYENGSLNAAGKHVVVLGGGDTAMDCVRTAIRQGA-------------TSVKCLYRRDRKNMPGSQRE-----VAHA 312 (456)
T ss_dssp TCSSCCTTCSCCCCSEEEEECSSHHHHHHHHHHHHTTC-------------SEEEEECSSCSTTCSSCHHH-----HHHH
T ss_pred ccccccccccccCCCEEEEECCChhHHHHHHHHHHcCC-------------CEEEEEEeCCccCCCCCHHH-----HHHH
Confidence 000000 0011346799999999999999999988761 3699999974 2 5555443 2457
Q ss_pred hhcCcEEEcCe-EEEEeCCe----EEec------------------CC--cEEeccEEEEecCCCCc-c--ccccCCCCC
Q 018704 295 SKSGVRLVRGI-VKDVDSQK----LILN------------------DG--TEVPYGLLVWSTGVGPS-T--LVKSLDLPK 346 (351)
Q Consensus 295 ~~~gV~~~~~~-v~~v~~~~----v~~~------------------~g--~~~~~D~vi~a~G~~p~-~--~~~~~gl~~ 346 (351)
++.||+++++. ++++.+++ |.+. +| .++++|.||+|+|+.|+ . +++.+|+++
T Consensus 313 ~~~Gv~~~~~~~~~~i~~~g~v~~v~~~~~~~~~~d~~G~~~~~~~~g~~~~i~aD~Vi~A~G~~p~~~~~~l~~~gl~~ 392 (456)
T 2vdc_G 313 EEEGVEFIWQAAPEGFTGDTVVTGVRAVRIHLGVADATGRQTPQVIEGSEFTVQADLVIKALGFEPEDLPNAFDEPELKV 392 (456)
T ss_dssp HHTTCEEECCSSSCCEEEEEEEETTEEEEEEEEEEEECTTCCEEEEEEEEEEEECSEEEECSCEECCCHHHHHHSTTSCB
T ss_pred HHCCCEEEeCCCceEEeCCCcEEEEEEEEEEecccCCcCCccccccCCcEEEEECCEEEECCCCCCCcchhhcccCCeeE
Confidence 77899999984 66654321 2221 23 36899999999999998 3 788889988
Q ss_pred CCCC
Q 018704 347 SPGG 350 (351)
Q Consensus 347 ~~~G 350 (351)
+++|
T Consensus 393 ~~~G 396 (456)
T 2vdc_G 393 TRWG 396 (456)
T ss_dssp CTTS
T ss_pred CCCC
Confidence 8776
No 83
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=99.93 E-value=3.4e-25 Score=214.37 Aligned_cols=235 Identities=18% Similarity=0.202 Sum_probs=158.6
Q ss_pred CCCcEEEECCchhHHHHHHhhhccCceEEEEcCCCccccc--hhhhhhhcccccccccccchhccchhhhcCCCeEEEEE
Q 018704 61 EKPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRNHMVFT--PLLASTCVGTLEFRSVAEPIARIQPAISREPGSYFFLS 138 (351)
Q Consensus 61 ~~~~VvIIG~G~aGl~aA~~L~~~g~~v~vie~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 138 (351)
..+||+||||||||+++|.+|++.|++|+|+|+.....+. ..+.... +.+. . ....+...........++.++..
T Consensus 211 ~~~dVvIIGgG~AGl~aA~~la~~G~~v~lie~~~GG~~~~~~~~~~~~-~~~~-~-~~~~l~~~l~~~~~~~gv~v~~~ 287 (521)
T 1hyu_A 211 DAYDVLIVGSGPAGAAAAVYSARKGIRTGLMGERFGGQVLDTVDIENYI-SVPK-T-EGQKLAGALKAHVSDYDVDVIDS 287 (521)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSTTGGGTTCSCBCCBT-TBSS-B-CHHHHHHHHHHHHHTSCEEEECS
T ss_pred CcccEEEECCcHHHHHHHHHHHhCCCeEEEEECCCCCcccccccccccC-CCCC-C-CHHHHHHHHHHHHHHcCCEEEcC
Confidence 4589999999999999999999999999999874211110 0000000 0000 0 01112222223344557887776
Q ss_pred -EeeeEeCCC---CEEEEEeecCccccCCCceeEeeccEEEEecCCCcCCCCCCCcccc----ccccCCHHHHHHHHHHH
Q 018704 139 -HCAGIDTDN---HVVHCETVTDELRTLEPWKFKISYDKLVIALGAEASTFGIHGVKEN----ATFLREVHHAQEIRRKL 210 (351)
Q Consensus 139 -~v~~i~~~~---~~v~~~~~~~~~~~~~~~~~~~~~d~lviAtG~~p~~p~i~g~~~~----~~~~~~~~~~~~~~~~~ 210 (351)
+|+.++.+. ..+.+.. .++. .+.||+||+|||+.|+.|++||.++. +..+.... .
T Consensus 288 ~~v~~i~~~~~~~~~~~V~~-~~g~--------~~~~d~vVlAtG~~~~~~~ipG~~~~~~~~v~~~~~~~------~-- 350 (521)
T 1hyu_A 288 QSASKLVPAATEGGLHQIET-ASGA--------VLKARSIIIATGAKWRNMNVPGEDQYRTKGVTYCPHCD------G-- 350 (521)
T ss_dssp CCEEEEECCSSTTSCEEEEE-TTSC--------EEEEEEEEECCCEEECCCCCTTTTTTTTTTEECCTTCC------G--
T ss_pred CEEEEEEeccCCCceEEEEE-CCCC--------EEEcCEEEECCCCCcCCCCCCChhhhcCceEEEeecCc------h--
Confidence 899998642 2454433 4565 89999999999999999999997531 11111100 0
Q ss_pred HHhhhccCCCCCCHhhhcccCeEEEECCChHHHHHHHHHHHHHHHHHHhhhcCCCCccEEEEEeCCCCCCCCcHHHHHHH
Q 018704 211 LLNLMLSDVPGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEILSSFDDRLRHYA 290 (351)
Q Consensus 211 ~~~~~~~~~p~~~~~~~~~~~~v~VvGgG~~a~e~a~~l~~~~~~~~~~~~~~~~~~~~v~~~~~~~~l~~~~~~~~~~~ 290 (351)
....+++|+|||||++|+|+|..|.+.+ .+|+++++.+.+.. + +.+
T Consensus 351 ---------------~~~~~k~V~ViGgG~~g~E~A~~L~~~g--------------~~Vtlv~~~~~l~~-~----~~l 396 (521)
T 1hyu_A 351 ---------------PLFKGKRVAVIGGGNSGVEAAIDLAGIV--------------EHVTLLEFAPEMKA-D----QVL 396 (521)
T ss_dssp ---------------GGGBTSEEEEECCSHHHHHHHHHHHHHB--------------SEEEEECSSSSCCS-C----HHH
T ss_pred ---------------hhcCCCeEEEECCCHHHHHHHHHHHhhC--------------CEEEEEEeCcccCc-C----HHH
Confidence 0134579999999999999999999876 89999999753321 2 345
Q ss_pred HHHhhh-cCcEEEcCe-EEEEeCC-----eEEecC---Cc--EEeccEEEEecCCCCc-cccccCCCCCCCCC
Q 018704 291 TTQLSK-SGVRLVRGI-VKDVDSQ-----KLILND---GT--EVPYGLLVWSTGVGPS-TLVKSLDLPKSPGG 350 (351)
Q Consensus 291 ~~~l~~-~gV~~~~~~-v~~v~~~-----~v~~~~---g~--~~~~D~vi~a~G~~p~-~~~~~~gl~~~~~G 350 (351)
.+.+++ .||+++.+. ++++..+ ++.+.+ |+ ++++|.||+|+|++|+ +|++. +++++++|
T Consensus 397 ~~~l~~~~gV~v~~~~~v~~i~~~~~~v~~v~~~~~~~g~~~~i~~D~vi~a~G~~pn~~~l~~-~l~~~~~G 468 (521)
T 1hyu_A 397 QDKVRSLKNVDIILNAQTTEVKGDGSKVVGLEYRDRVSGDIHSVALAGIFVQIGLLPNTHWLEG-ALERNRMG 468 (521)
T ss_dssp HHHHTTCTTEEEECSEEEEEEEECSSSEEEEEEEETTTCCEEEEECSEEEECCCEEESCGGGTT-TSCBCTTS
T ss_pred HHHHhcCCCcEEEeCCEEEEEEcCCCcEEEEEEEeCCCCceEEEEcCEEEECcCCCCCchHHhh-hhccCCCC
Confidence 566766 699999995 9998753 466653 53 6899999999999999 78876 36666554
No 84
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=99.92 E-value=3e-25 Score=221.13 Aligned_cols=233 Identities=15% Similarity=0.187 Sum_probs=156.8
Q ss_pred CCCCcEEEECCchhHHHHHHhhhccCceEEEEcCCCccccchhhhhhhcccccccccccchhccchhhhcCCCeEEEEEE
Q 018704 60 NEKPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRNHMVFTPLLASTCVGTLEFRSVAEPIARIQPAISREPGSYFFLSH 139 (351)
Q Consensus 60 ~~~~~VvIIG~G~aGl~aA~~L~~~g~~v~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 139 (351)
...+||+|||||+||++||..|++.|++|+|||+++.+.+...+.... +....+...+..+... ....++.++...
T Consensus 371 ~~~~~vvIIGgG~AGl~aA~~l~~~g~~V~lie~~~~~gg~~~~~~~~---~~~~~~~~~~~~~~~~-~~~~gv~~~~~~ 446 (671)
T 1ps9_A 371 VQKKNLAVVGAGPAGLAFAINAAARGHQVTLFDAHSEIGGQFNIAKQI---PGKEEFYETLRYYRRM-IEVTGVTLKLNH 446 (671)
T ss_dssp SSCCEEEEECCSHHHHHHHHHHHTTTCEEEEEESSSSSCTTHHHHTTS---TTCTTHHHHHHHHHHH-HHHHTCEEEESC
T ss_pred CCCCeEEEECCCHHHHHHHHHHHhCCCeEEEEeCCCCCCCeeeccccC---CCHHHHHHHHHHHHHH-HHHcCCEEEeCc
Confidence 456899999999999999999999999999999988765543332221 1111111111112111 222355554432
Q ss_pred eeeEeCCCCEEEEEeecCccccCCCceeEe-eccEEEEecCCCcCCCCCCCccc-cccccCCHHHHHHHHHHHHHhhhcc
Q 018704 140 CAGIDTDNHVVHCETVTDELRTLEPWKFKI-SYDKLVIALGAEASTFGIHGVKE-NATFLREVHHAQEIRRKLLLNLMLS 217 (351)
Q Consensus 140 v~~i~~~~~~v~~~~~~~~~~~~~~~~~~~-~~d~lviAtG~~p~~p~i~g~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 217 (351)
.. ... .+ .||+||||||+.|+.|++||.+. .+++. .+. + ...
T Consensus 447 ~v---------------~~~--------~~~~~d~lviAtG~~p~~~~i~G~~~~~v~~~---~~~------l----~~~ 490 (671)
T 1ps9_A 447 TV---------------TAD--------QLQAFDETILASGIVPRTPPIDGIDHPKVLSY---LDV------L----RDK 490 (671)
T ss_dssp CC---------------CSS--------SSCCSSEEEECCCEEECCCCCBTTTSTTEEEH---HHH------H----TSC
T ss_pred Ee---------------cHH--------HhhcCCEEEEccCCCcCCCCCCCCCCCcEeeH---HHH------h----hCC
Confidence 11 011 34 89999999999999999999753 23322 111 1 001
Q ss_pred CCCCCCHhhhcccCeEEEECCChHHHHHHHHHHHHHHH------HHHhhh----------------cCC-CCccEEEEEe
Q 018704 218 DVPGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMR------DVRQRY----------------SHV-KDYIHVTLIE 274 (351)
Q Consensus 218 ~~p~~~~~~~~~~~~v~VvGgG~~a~e~a~~l~~~~~~------~~~~~~----------------~~~-~~~~~v~~~~ 274 (351)
. ..+++|+|||||++|+|+|..|.+.+.+ ++.+.+ +.. ....+|++++
T Consensus 491 ~---------~~~~~VvVIGgG~~g~E~A~~l~~~G~~vtv~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~v~l~~ 561 (671)
T 1ps9_A 491 A---------PVGNKVAIIGCGGIGFDTAMYLSQPGESTSQNIAGFCNEWGIDSSLQQAGGLSPQGMQIPRSPRQIVMLQ 561 (671)
T ss_dssp C---------CCCSEEEEECCHHHHHHHHHHHTCCSSCGGGCHHHHHHHTTBCTTCCSGGGBCTTCCCCCCCSSEEEEEC
T ss_pred C---------CCCCeEEEECCChhHHHHHHHHHhcCCCcccchhhhhhhhcccccccccccccccccccCCCCcEEEEEE
Confidence 0 2346999999999999999999876521 111111 111 1236789998
Q ss_pred CCC--CCCCCcHHHHHHHHHHhhhcCcEEEcCe-EEEEeCCeEEe-cCC--cEEeccEEEEecCCCCc-ccccc
Q 018704 275 ANE--ILSSFDDRLRHYATTQLSKSGVRLVRGI-VKDVDSQKLIL-NDG--TEVPYGLLVWSTGVGPS-TLVKS 341 (351)
Q Consensus 275 ~~~--~l~~~~~~~~~~~~~~l~~~gV~~~~~~-v~~v~~~~v~~-~~g--~~~~~D~vi~a~G~~p~-~~~~~ 341 (351)
+.. +...+++.....+.+.+++.||+++++. |++++++++++ .+| +++++|.||+|+|++|+ ++++.
T Consensus 562 ~~~~~l~~~l~~~~~~~~~~~l~~~GV~v~~~~~v~~i~~~~v~~~~~G~~~~i~~D~Vi~a~G~~p~~~l~~~ 635 (671)
T 1ps9_A 562 RKASKPGQGLGKTTGWIHRTTLLSRGVKMIPGVSYQKIDDDGLHVVINGETQVLAVDNVVICAGQEPNRALAQP 635 (671)
T ss_dssp SSCSCTTTTSCTTTHHHHHHHHHHTTCEEECSCEEEEEETTEEEEEETTEEEEECCSEEEECCCEEECCTTHHH
T ss_pred ecchhhccccccccHHHHHHHHHhcCCEEEeCcEEEEEeCCeEEEecCCeEEEEeCCEEEECCCccccHHHHHH
Confidence 863 2344666777778888999999999995 99999888877 677 57999999999999999 66654
No 85
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=99.92 E-value=4e-25 Score=220.75 Aligned_cols=224 Identities=16% Similarity=0.107 Sum_probs=153.9
Q ss_pred CCCCcEEEECCchhHHHHHHhhhccCceEEEEcCCCccccchhhhhhhcccccccccccchhccchhhhcCCCeEEEEEE
Q 018704 60 NEKPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRNHMVFTPLLASTCVGTLEFRSVAEPIARIQPAISREPGSYFFLSH 139 (351)
Q Consensus 60 ~~~~~VvIIG~G~aGl~aA~~L~~~g~~v~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 139 (351)
..++||+|||||+|||+||+.|++.|++|+|||+++.+.......... +....+..........+....++.++...
T Consensus 389 ~~~~~VvIIGgG~AGl~aA~~La~~G~~V~liE~~~~~GG~~~~~~~~---p~~~~~~~~~~~~~~~~~~~~gv~~~~~~ 465 (690)
T 3k30_A 389 ESDARVLVVGAGPSGLEAARALGVRGYDVVLAEAGRDLGGRVTQESAL---PGLSAWGRVKEYREAVLAELPNVEIYRES 465 (690)
T ss_dssp SSCCEEEEECCSHHHHHHHHHHHHHTCEEEEECSSSSSCTHHHHHHTS---TTCGGGGHHHHHHHHHHHTCTTEEEESSC
T ss_pred cccceEEEECCCHHHHHHHHHHHHCCCeEEEEecCCCCCCEeeeccCC---CchhHHHHHHHHHHHHHHHcCCCEEEECC
Confidence 456899999999999999999999999999999988765443322222 22222222222222223333355554321
Q ss_pred eeeEeCCCCEEEEEeecCccccCCCceeEeeccEEEEecCCCc--------CCCCCCCccc-cccccCCHHHHHHHHHHH
Q 018704 140 CAGIDTDNHVVHCETVTDELRTLEPWKFKISYDKLVIALGAEA--------STFGIHGVKE-NATFLREVHHAQEIRRKL 210 (351)
Q Consensus 140 v~~i~~~~~~v~~~~~~~~~~~~~~~~~~~~~d~lviAtG~~p--------~~p~i~g~~~-~~~~~~~~~~~~~~~~~~ 210 (351)
.+. ..+.. .+.||+||+|||+.| ..|.+||.+. .+++ ..+.. .
T Consensus 466 ---------~v~---~~~~~--------~~~~d~lvlAtG~~~~~~~~~~~~~~~i~G~~~~~v~~---~~~~l---~-- 517 (690)
T 3k30_A 466 ---------PMT---GDDIV--------EFGFEHVITATGATWRTDGVARFHTTALPIAEGMQVLG---PDDLF---A-- 517 (690)
T ss_dssp ---------CCC---HHHHH--------HTTCCEEEECCCEEECSSCCSSSCSSCCCBCTTSEEEC---HHHHH---T--
T ss_pred ---------eec---HHHHh--------hcCCCEEEEcCCCccccccccccCCCCCCCCCCCcEEc---HHHHh---C--
Confidence 111 11222 688999999999984 4678888752 2222 22211 1
Q ss_pred HHhhhccCCCCCCHhhhcccCeEEEEC--CChHHHHHHHHHHHHHHHHHHhhhcCCCCccEEEEEeCCC-CCCCCc-HHH
Q 018704 211 LLNLMLSDVPGISEEEKSRLLHCVVVG--GGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANE-ILSSFD-DRL 286 (351)
Q Consensus 211 ~~~~~~~~~p~~~~~~~~~~~~v~VvG--gG~~a~e~a~~l~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~l~~~~-~~~ 286 (351)
. .. ..+++|+||| +|.+|+|+|..|.+.+ .+|+++++.+ +++... +..
T Consensus 518 -----~-~~--------~~g~~VvViG~ggG~~g~e~A~~L~~~g--------------~~Vtlv~~~~~l~~~~~~~~~ 569 (690)
T 3k30_A 518 -----G-RL--------PDGKKVVVYDDDHYYLGGVVAELLAQKG--------------YEVSIVTPGAQVSSWTNNTFE 569 (690)
T ss_dssp -----T-CC--------CSSSEEEEEECSCSSHHHHHHHHHHHTT--------------CEEEEEESSSSTTGGGGGGTC
T ss_pred -----C-CC--------CCCCEEEEEcCCCCccHHHHHHHHHhCC--------------CeeEEEecccccccccccchh
Confidence 0 11 3346899999 9999999999999887 8999999975 444332 455
Q ss_pred HHHHHHHhhhcCcEEEcCe-EEEEeCCeEEec-----CCcEEeccEEEEecCCCCc-cccccC
Q 018704 287 RHYATTQLSKSGVRLVRGI-VKDVDSQKLILN-----DGTEVPYGLLVWSTGVGPS-TLVKSL 342 (351)
Q Consensus 287 ~~~~~~~l~~~gV~~~~~~-v~~v~~~~v~~~-----~g~~~~~D~vi~a~G~~p~-~~~~~~ 342 (351)
...+.+.+++.||+++.+. |++++.+++.+. +++++++|.||+|+|++|+ .+++.+
T Consensus 570 ~~~l~~~l~~~GV~i~~~~~V~~i~~~~~~v~~~~~~~~~~i~aD~VV~A~G~~p~~~l~~~l 632 (690)
T 3k30_A 570 VNRIQRRLIENGVARVTDHAVVAVGAGGVTVRDTYASIERELECDAVVMVTARLPREELYLDL 632 (690)
T ss_dssp HHHHHHHHHHTTCEEEESEEEEEEETTEEEEEETTTCCEEEEECSEEEEESCEEECCHHHHHH
T ss_pred HHHHHHHHHHCCCEEEcCcEEEEEECCeEEEEEccCCeEEEEECCEEEECCCCCCChHHHHHH
Confidence 6778888999999999995 999998876653 4567999999999999999 665543
No 86
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=99.91 E-value=6.6e-25 Score=220.14 Aligned_cols=229 Identities=16% Similarity=0.132 Sum_probs=146.2
Q ss_pred CCCCcEEEECCchhHHHHHHhhhccCceEEEEcCCCccccchhhhhhhcccccccccccchhccchhhh--cCCCeEEEE
Q 018704 60 NEKPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRNHMVFTPLLASTCVGTLEFRSVAEPIARIQPAIS--REPGSYFFL 137 (351)
Q Consensus 60 ~~~~~VvIIG~G~aGl~aA~~L~~~g~~v~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~ 137 (351)
...+||+|||||+|||+||..|++.|++|+|||+++.+...........+...+..+...+......+. ...++.+
T Consensus 387 ~~~~~VvIIGgGpAGl~aA~~L~~~G~~Vtlie~~~~~GG~~~~~~~~pg~~~~~~~~~~~~~~i~~~~~~~~~~v~i-- 464 (729)
T 1o94_A 387 KNKDSVLIVGAGPSGSEAARVLMESGYTVHLTDTAEKIGGHLNQVAALPGLGEWSYHRDYRETQITKLLKKNKESQLA-- 464 (729)
T ss_dssp SSCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSTTTTHHHHTTSTTCGGGHHHHHHHHHHHHHHHHHSTTCEEE--
T ss_pred cCCceEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCCcCCeeeecccCCChHHHHHHHHHHHHHHHHhhcccCCceEE--
Confidence 456899999999999999999999999999999987753221111111111111111111111111110 0112222
Q ss_pred EEeeeEeCCCCEEEEEeecCccccCCCceeEeeccEEEEecCCC--------cCCCCCCCccccccccCCHHHHHHHHHH
Q 018704 138 SHCAGIDTDNHVVHCETVTDELRTLEPWKFKISYDKLVIALGAE--------ASTFGIHGVKENATFLREVHHAQEIRRK 209 (351)
Q Consensus 138 ~~v~~i~~~~~~v~~~~~~~~~~~~~~~~~~~~~d~lviAtG~~--------p~~p~i~g~~~~~~~~~~~~~~~~~~~~ 209 (351)
+. ++.+.+ +++. .+.||+||||||+. |+.|++||.++....+.+..+.. ..
T Consensus 465 ------~~-~~~v~~---~~~~--------~~~~d~vviAtG~~~~~~~~~~p~~~~ipG~~~~~~~v~~~~~~l--~~- 523 (729)
T 1o94_A 465 ------LG-QKPMTA---DDVL--------QYGADKVIIATGARWNTDGTNCLTHDPIPGADASLPDQLTPEQVM--DG- 523 (729)
T ss_dssp ------CS-CCCCCH---HHHH--------TSCCSEEEECCCEEECSSCCCTTTSSCCTTCCTTSTTEECHHHHH--HC-
T ss_pred ------Ee-CeEEeh---hhcc--------ccCCCEEEEcCCCCcccccccCccCCCCCCccccCCCEEEHHHHh--cC-
Confidence 11 122211 2233 68899999999997 56778898752111122222221 11
Q ss_pred HHHhhhccCCCCCCHhhhcccCeEEEEC--CChHHHHHHHHHHHHHHHHHHhhhcCCCCccEEEEEeCCCCCC--CCcHH
Q 018704 210 LLLNLMLSDVPGISEEEKSRLLHCVVVG--GGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEILS--SFDDR 285 (351)
Q Consensus 210 ~~~~~~~~~~p~~~~~~~~~~~~v~VvG--gG~~a~e~a~~l~~~~~~~~~~~~~~~~~~~~v~~~~~~~~l~--~~~~~ 285 (351)
.. ..+++|+||| ||++|+|+|..|.+++ .+|+++++.++++ .++..
T Consensus 524 --------~~--------~~gk~VvVIG~GgG~~g~e~A~~l~~~G--------------~~Vtlv~~~~l~~~~~~~~~ 573 (729)
T 1o94_A 524 --------KK--------KIGKRVVILNADTYFMAPSLAEKLATAG--------------HEVTIVSGVHLANYMHFTLE 573 (729)
T ss_dssp --------CS--------CCCSEEEEEECCCSSHHHHHHHHHHHTT--------------CEEEEEESSCTTHHHHHTTC
T ss_pred --------CC--------CCCCeEEEEcCCCCchHHHHHHHHHHcC--------------CEEEEEeccccccccccccc
Confidence 01 2346999999 9999999999999887 8999999977322 12222
Q ss_pred HHHHHHHHhhhcCcEEEcCe-EEEEeCCeEEec----CC-cE------------------EeccEEEEecCCCCc-cccc
Q 018704 286 LRHYATTQLSKSGVRLVRGI-VKDVDSQKLILN----DG-TE------------------VPYGLLVWSTGVGPS-TLVK 340 (351)
Q Consensus 286 ~~~~~~~~l~~~gV~~~~~~-v~~v~~~~v~~~----~g-~~------------------~~~D~vi~a~G~~p~-~~~~ 340 (351)
...+.+.+++.||+++++. |++++.+++.+. ++ ++ +++|.||+|+|++|+ ++++
T Consensus 574 -~~~~~~~l~~~GV~i~~~~~v~~i~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~aD~Vv~a~G~~p~~~l~~ 652 (729)
T 1o94_A 574 -YPNMMRRLHELHVEELGDHFCSRIEPGRMEIYNIWGDGSKRTYRGPGVSPRDANTSHRWIEFDSLVLVTGRHSECTLWN 652 (729)
T ss_dssp -HHHHHHHHHHTTCEEECSEEEEEEETTEEEEEETTCSCSCCCCCCTTSCSSCCCCCCEEEECSEEEEESCEEECCHHHH
T ss_pred -HHHHHHHHHhCCCEEEcCcEEEEEECCeEEEEEecCCceEEecccccccccccCCcceeeeCCEEEECCCCCCChHHHH
Confidence 4567788889999999995 999998776542 33 33 899999999999999 6665
Q ss_pred cC
Q 018704 341 SL 342 (351)
Q Consensus 341 ~~ 342 (351)
.+
T Consensus 653 ~l 654 (729)
T 1o94_A 653 EL 654 (729)
T ss_dssp HH
T ss_pred HH
Confidence 44
No 87
>1lqt_A FPRA; NADP+ derivative, oxidoreductase, structural G PSI, protein structure initiative, TB structural genomics consortium, TBSGC; HET: FAD ODP; 1.05A {Mycobacterium tuberculosis} SCOP: c.3.1.1 c.4.1.1 PDB: 1lqu_A* 2c7g_A*
Probab=99.91 E-value=3.2e-24 Score=203.93 Aligned_cols=250 Identities=14% Similarity=0.146 Sum_probs=150.8
Q ss_pred CCcEEEECCchhHHHHHHhhhc-c------CceEEEEcCCCccccchhhhhhhcccccccccccchhccchhhhcCCCeE
Q 018704 62 KPRVVVLGSGWAGCRLMKGIDT-S------LYDVVCVSPRNHMVFTPLLASTCVGTLEFRSVAEPIARIQPAISREPGSY 134 (351)
Q Consensus 62 ~~~VvIIG~G~aGl~aA~~L~~-~------g~~v~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 134 (351)
++||+||||||||+++|..|++ . |++|+|||+.+..... +..+.. +... ....+...........++.
T Consensus 3 ~~~VvIIG~G~aGl~aA~~L~~~~~~~~~~g~~V~lie~~~~~gg~-~~~gv~---p~~~-~~~~~~~~~~~~~~~~~v~ 77 (456)
T 1lqt_A 3 PYYIAIVGSGPSAFFAAASLLKAADTTEDLDMAVDMLEMLPTPWGL-VRSGVA---PDHP-KIKSISKQFEKTAEDPRFR 77 (456)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHHHHSTTCCEEEEEEESSSSCSTH-HHHTSC---TTCT-GGGGGHHHHHHHHTSTTEE
T ss_pred CCEEEEECcCHHHHHHHHHHHhhCccccCCCCeEEEEecCCCCCCc-cccccC---CCCC-CHHHHHHHHHHHHhcCCCE
Confidence 4799999999999999999999 7 9999999998764321 111111 1111 1122222223334455777
Q ss_pred EEEEEeeeEeCCCCEEEEEeecCccccCCCceeEeeccEEEEecCCC-cCCCCCCCcc-ccccccCCHHHHHHHHHHHHH
Q 018704 135 FFLSHCAGIDTDNHVVHCETVTDELRTLEPWKFKISYDKLVIALGAE-ASTFGIHGVK-ENATFLREVHHAQEIRRKLLL 212 (351)
Q Consensus 135 ~~~~~v~~i~~~~~~v~~~~~~~~~~~~~~~~~~~~~d~lviAtG~~-p~~p~i~g~~-~~~~~~~~~~~~~~~~~~~~~ 212 (351)
++.. +. + .+.+.+ .++ .+.||+||+|||+. |+.+++||.+ +.++ ++..+..++..
T Consensus 78 ~~~~-v~-v---~~~v~~---~~~---------~~~~d~lViAtG~~~~~~~~ipG~~~~gv~------~~~~~~~~~~~ 134 (456)
T 1lqt_A 78 FFGN-VV-V---GEHVQP---GEL---------SERYDAVIYAVGAQSDRMLNIPGEDLPGSI------AAVDFVGWYNA 134 (456)
T ss_dssp EEES-CC-B---TTTBCH---HHH---------HHHSSEEEECCCCCEECCCCCTTTTSTTEE------EHHHHHHHHTT
T ss_pred EEee-EE-E---CCEEEE---CCC---------eEeCCEEEEeeCCCCCCCCCCCCCCCCCcE------EHHHHHhhhhc
Confidence 7654 22 2 122322 112 57899999999997 7888999975 2222 23333333211
Q ss_pred hhhc-cCCCCCCHhhhcccCeEEEECCChHHHHHHHHHHHHHHH--------HHHhhhcCCCCccEEEEEeCCC-CCCCC
Q 018704 213 NLML-SDVPGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMR--------DVRQRYSHVKDYIHVTLIEANE-ILSSF 282 (351)
Q Consensus 213 ~~~~-~~~p~~~~~~~~~~~~v~VvGgG~~a~e~a~~l~~~~~~--------~~~~~~~~~~~~~~v~~~~~~~-~l~~~ 282 (351)
..+. ...+ ....++|+|||+|++|+|+|..|.+.+.+ .+.+.... ....+|+++.|+. +...+
T Consensus 135 ~~d~~~~~~------~~~~~~vvVIG~G~~g~e~A~~L~~~~~~l~~tdi~~~~~~~l~~-~g~~~V~lv~r~~~~~~~f 207 (456)
T 1lqt_A 135 HPHFEQVSP------DLSGARAVVIGNGNVALDVARILLTDPDVLARTDIADHALESLRP-RGIQEVVIVGRRGPLQAAF 207 (456)
T ss_dssp CGGGTTCCC------CCCSSEEEEECCSHHHHHHHHHHHSCHHHHTTSCCCHHHHHHHTT-CCCCEEEEECSSCGGGCCC
T ss_pred Ccccccchh------hcCCCEEEEECCCHHHHHHHHHHHhhhhhhcCCCccHHHHHHHHH-CCCcEEEEEecCChhhhcc
Confidence 1111 1111 01357999999999999999999874310 00000000 0114899999974 32222
Q ss_pred c-------------------HHH------------------HHHHHHHhhh------cCcEEEcCe-EEEEeCC----eE
Q 018704 283 D-------------------DRL------------------RHYATTQLSK------SGVRLVRGI-VKDVDSQ----KL 314 (351)
Q Consensus 283 ~-------------------~~~------------------~~~~~~~l~~------~gV~~~~~~-v~~v~~~----~v 314 (351)
. .++ .+.+.+.+++ +||+++++. ++++.++ +|
T Consensus 208 ~~~elrel~~lp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~gv~i~~~~~~~~i~~~~~v~~v 287 (456)
T 1lqt_A 208 TTLELRELADLDGVDVVIDPAELDGITDEDAAAVGKVCKQNIKVLRGYADREPRPGHRRMVFRFLTSPIEIKGKRKVERI 287 (456)
T ss_dssp CHHHHHHGGGCTTEEEECCGGGGTTCCHHHHHHHCHHHHHHHHHHHHHHTCC-CTTSEEEEEECSEEEEEEECSSSCCEE
T ss_pred ChHHHHHhhcCCCceeeeChHHhccchhhhhhhccHHHHHHHHHHHHHhhcCCCCCCceEEEEeCCCCeEEecCCcEeEE
Confidence 1 111 2344555555 799999995 8888764 36
Q ss_pred Eec----------------CC--cEEeccEEEEecCCCCccccccCCCCCCCC
Q 018704 315 ILN----------------DG--TEVPYGLLVWSTGVGPSTLVKSLDLPKSPG 349 (351)
Q Consensus 315 ~~~----------------~g--~~~~~D~vi~a~G~~p~~~~~~~gl~~~~~ 349 (351)
++. +| ++++||.||+|+|++|+++ .|+++|++
T Consensus 288 ~~~~~~~~~~~~~~~~~~~~g~~~~i~~d~vi~a~G~~p~~l---~gl~~d~~ 337 (456)
T 1lqt_A 288 VLGRNELVSDGSGRVAAKDTGEREELPAQLVVRSVGYRGVPT---PGLPFDDQ 337 (456)
T ss_dssp EEEEEEEEECSSSSEEEEEEEEEEEEECSEEEECSCEECCCC---TTSCCBTT
T ss_pred EEEEEEecCCCcccccccCCCceEEEEcCEEEEccccccCCC---CCCcccCC
Confidence 664 34 4689999999999999973 34555543
No 88
>2gag_A Heterotetrameric sarcosine oxidase alpha-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_A* 1x31_A* 1vrq_A* 3ad7_A* 3ad8_A* 3ad9_A* 3ada_A*
Probab=99.91 E-value=3.1e-24 Score=220.92 Aligned_cols=238 Identities=17% Similarity=0.180 Sum_probs=157.8
Q ss_pred CCcEEEECCchhHHHHHHhhhccCceEEEEcCCCccccchhhhhhhc-ccccccccccchhccchhhhcCCCeEEEE-EE
Q 018704 62 KPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRNHMVFTPLLASTCV-GTLEFRSVAEPIARIQPAISREPGSYFFL-SH 139 (351)
Q Consensus 62 ~~~VvIIG~G~aGl~aA~~L~~~g~~v~vie~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 139 (351)
.+||||||||||||+||.+|++.|++|+|||+++.+..... . +. ..................+....++.++. .+
T Consensus 128 ~~dVvVIGaGpAGl~AA~~la~~G~~V~lie~~~~~GG~~~-~--~~k~~i~~~~~~~~~~~~~~~l~~~~~v~~~~~~~ 204 (965)
T 2gag_A 128 HTDVLVVGAGPAGLAAAREASRSGARVMLLDERAEAGGTLL-D--TAGEQIDGMDSSAWIEQVTSELAEAEETTHLQRTT 204 (965)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSSGGGG-G--SSCCEETTEEHHHHHHHHHHHHHHSTTEEEESSEE
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCcEEEEeCCCCCCceec-c--CCccccCCCCHHHHHHHHHHHHhhcCCcEEEeCCE
Confidence 47899999999999999999999999999999876542221 1 10 00111101111122223334445676654 47
Q ss_pred eeeEeCCCCEEEEEeecCccccC-------CCceeEeeccEEEEecCCCcCCCCCCCcc-ccccccCCHHHHHHHHHHHH
Q 018704 140 CAGIDTDNHVVHCETVTDELRTL-------EPWKFKISYDKLVIALGAEASTFGIHGVK-ENATFLREVHHAQEIRRKLL 211 (351)
Q Consensus 140 v~~i~~~~~~v~~~~~~~~~~~~-------~~~~~~~~~d~lviAtG~~p~~p~i~g~~-~~~~~~~~~~~~~~~~~~~~ 211 (351)
|..++.......++...+ .... ..+...+.||+||||||+.|+.|++||.+ +.+++...+ ..+.+.
T Consensus 205 V~~i~~~~~~~~v~~~~~-~~~v~~~~~~~~~~~~~i~~d~lVlATGs~p~~~~ipG~~~~gv~~~~~~---~~~l~~-- 278 (965)
T 2gag_A 205 VFGSYDANYLIAAQRRTV-HLDGPSGPGVSRERIWHIRAKQVVLATGAHERPIVFENNDRPGIMLAGAV---RSYLNR-- 278 (965)
T ss_dssp EEEEETTTEEEEEEECST-TCSSCCCTTCCSEEEEEEEEEEEEECCCEEECCCCCBTCCSTTEEEHHHH---HHHHHT--
T ss_pred EEeeecCCceeeeEeecc-cccccccccCCCCceEEEECCEEEECCCCccCCCCCCCCCCCCEEEhHHH---HHHHHh--
Confidence 888876654433322111 0000 01123789999999999999999999975 334433222 221111
Q ss_pred HhhhccCCCCCCHhhhcccCeEEEECCChHHHHHHHHHHHHHHHHHHhhhcCCCCccEEEEEeCCCCCCCCcHHHHHHHH
Q 018704 212 LNLMLSDVPGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEILSSFDDRLRHYAT 291 (351)
Q Consensus 212 ~~~~~~~~p~~~~~~~~~~~~v~VvGgG~~a~e~a~~l~~~~~~~~~~~~~~~~~~~~v~~~~~~~~l~~~~~~~~~~~~ 291 (351)
... ..+++++|||+|++|+|+|..|.+++ .+|+++++.+.+. +. .
T Consensus 279 ----~~~---------~~gk~vvViGgG~~g~E~A~~L~~~G--------------~~Vtvv~~~~~~~---~~-----~ 323 (965)
T 2gag_A 279 ----YGV---------RAGARIAVATTNDSAYELVRELAATG--------------GVVAVIDARSSIS---AA-----A 323 (965)
T ss_dssp ----TCE---------ESCSSEEEEESSTTHHHHHHHHGGGT--------------CCSEEEESCSSCC---HH-----H
T ss_pred ----cCC---------CCCCeEEEEcCCHHHHHHHHHHHHcC--------------CcEEEEECCCccc---hh-----H
Confidence 011 23469999999999999999999887 7899999975332 12 4
Q ss_pred HHhhhcCcEEEcCe-EEEEeC--C----eEEecC-------C--cEEeccEEEEecCCCCc-cccccCC
Q 018704 292 TQLSKSGVRLVRGI-VKDVDS--Q----KLILND-------G--TEVPYGLLVWSTGVGPS-TLVKSLD 343 (351)
Q Consensus 292 ~~l~~~gV~~~~~~-v~~v~~--~----~v~~~~-------g--~~~~~D~vi~a~G~~p~-~~~~~~g 343 (351)
+.+++.||+++.+. |+++.. + +|++.+ | +++++|.||+|+|++|+ ++++.++
T Consensus 324 ~~l~~~GV~v~~~~~v~~i~~~~~~~v~~v~~~~~~~~~~~G~~~~i~~D~Vv~a~G~~P~~~l~~~~~ 392 (965)
T 2gag_A 324 AQAVADGVQVISGSVVVDTEADENGELSAIVVAELDEARELGGTQRFEADVLAVAGGFNPVVHLHSQRQ 392 (965)
T ss_dssp HHHHHTTCCEEETEEEEEEEECTTSCEEEEEEEEECTTCCEEEEEEEECSEEEEECCEEECCHHHHHTT
T ss_pred HHHHhCCeEEEeCCEeEEEeccCCCCEEEEEEEeccccCCCCceEEEEcCEEEECCCcCcChHHHHhCC
Confidence 66788999999995 999875 2 577764 5 57999999999999999 7776554
No 89
>1cjc_A Protein (adrenodoxin reductase); flavoenzyme, MAD analysis, electron transferase, oxidoreductase; HET: FAD; 1.70A {Bos taurus} SCOP: c.3.1.1 c.4.1.1 PDB: 1e1k_A* 1e1l_A* 1e1m_A* 1e1n_A* 1e6e_A*
Probab=99.90 E-value=5.7e-24 Score=202.43 Aligned_cols=250 Identities=15% Similarity=0.126 Sum_probs=148.2
Q ss_pred CCcEEEECCchhHHHHHHhhhccC--ceEEEEcCCCccccchhhhhhhcccccccccccchhccchhhhcCCCeEEEEEE
Q 018704 62 KPRVVVLGSGWAGCRLMKGIDTSL--YDVVCVSPRNHMVFTPLLASTCVGTLEFRSVAEPIARIQPAISREPGSYFFLSH 139 (351)
Q Consensus 62 ~~~VvIIG~G~aGl~aA~~L~~~g--~~v~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 139 (351)
+++|+|||||++|+++|..|++.| ++|+|||+.+... ..+..+ + .+.+. ....+...........++.++...
T Consensus 6 ~~~vvIIG~G~aGl~aA~~l~~~g~~~~V~vie~~~~~g-g~~~~g-~--~p~~~-~~~~~~~~~~~~~~~~gv~~~~~~ 80 (460)
T 1cjc_A 6 TPQICVVGSGPAGFYTAQHLLKHHSRAHVDIYEKQLVPF-GLVRFG-V--APDHP-EVKNVINTFTQTARSDRCAFYGNV 80 (460)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCSSCEEEEECSSSSSC-THHHHT-S--CTTCG-GGGGHHHHHHHHHTSTTEEEEBSC
T ss_pred CceEEEECcCHHHHHHHHHHHhcCCCCCEEEEeCCCcCC-ceeecc-c--CCCCc-cHHHHHHHHHHHHHhCCcEEEeee
Confidence 479999999999999999999988 9999999987753 111111 1 11111 112222222333445577766542
Q ss_pred eeeEeCCCCEEEEEeecCccccCCCceeEeeccEEEEecCCCc-CCCCCCCcc-ccccccCCHHHHHHHHHHHHHhhhcc
Q 018704 140 CAGIDTDNHVVHCETVTDELRTLEPWKFKISYDKLVIALGAEA-STFGIHGVK-ENATFLREVHHAQEIRRKLLLNLMLS 217 (351)
Q Consensus 140 v~~i~~~~~~v~~~~~~~~~~~~~~~~~~~~~d~lviAtG~~p-~~p~i~g~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 217 (351)
.. .+.+.+ .+ . .+.||+||+|||+.| +.|++||.+ +.+++. ..+..++....+..
T Consensus 81 ~v-----~~~V~~---~~-~--------~~~~d~lVlAtGs~~~~~~~ipG~~~~gv~~~------~~~~~~~~~~~d~~ 137 (460)
T 1cjc_A 81 EV-----GRDVTV---QE-L--------QDAYHAVVLSYGAEDHQALDIPGEELPGVFSA------RAFVGWYNGLPENR 137 (460)
T ss_dssp CB-----TTTBCH---HH-H--------HHHSSEEEECCCCCEECCCCCTTTTSTTEEEH------HHHHHHHTTCGGGT
T ss_pred EE-----eeEEEe---cc-c--------eEEcCEEEEecCcCCCCCCCCCCCCCCcEEEH------HHHHHHhhcCcccc
Confidence 22 122221 11 2 578999999999995 888999975 233332 22222221111111
Q ss_pred CCCCCCHhhhcccCeEEEECCChHHHHHHHHHHHHHHHHHH---------hhhcCCCCcc-EEEEEeCCCC---------
Q 018704 218 DVPGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVR---------QRYSHVKDYI-HVTLIEANEI--------- 278 (351)
Q Consensus 218 ~~p~~~~~~~~~~~~v~VvGgG~~a~e~a~~l~~~~~~~~~---------~~~~~~~~~~-~v~~~~~~~~--------- 278 (351)
..+. ...+++++|||+|++|+|+|..|.+.. +++. +... ..+. +|+++.|+..
T Consensus 138 ~~~~-----~~~~~~vvVIGgG~~g~e~A~~L~~~~-~~l~~tdi~~~a~~~l~--~~g~~~V~lv~r~~~~~~~ft~~e 209 (460)
T 1cjc_A 138 ELAP-----DLSCDTAVILGQGNVALDVARILLTPP-DHLEKTDITEAALGALR--QSRVKTVWIVGRRGPLQVAFTIKE 209 (460)
T ss_dssp TCCC-----CTTSSEEEEESCSHHHHHHHHHHHSCG-GGGTTSCCCHHHHHHHH--TCCCCEEEEECSSCGGGCCCCHHH
T ss_pred cccc-----CCCCCEEEEECCCHHHHHHHHHHhhch-hhhccccccHHHHHHHh--hCCCcEEEEEEcCChHhhccCHHH
Confidence 1110 013579999999999999999998411 0000 0000 1124 7999999742
Q ss_pred ------CCCC-------------------cH---HHHHHHHHHhhh--------------cCcEEEcCe-EEEEeCC---
Q 018704 279 ------LSSF-------------------DD---RLRHYATTQLSK--------------SGVRLVRGI-VKDVDSQ--- 312 (351)
Q Consensus 279 ------l~~~-------------------~~---~~~~~~~~~l~~--------------~gV~~~~~~-v~~v~~~--- 312 (351)
++.. +. .+.+.+.+.+++ .||+++++. +.++..+
T Consensus 210 l~~l~~lp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~gv~~~~~~~~~~i~~~~~~ 289 (460)
T 1cjc_A 210 LREMIQLPGTRPMLDPADFLGLQDRIKEAARPRKRLMELLLRTATEKPGVEEAARRASASRAWGLRFFRSPQQVLPSPDG 289 (460)
T ss_dssp HHHHHTCTTEEEECCGGGGTTHHHHTTTSCHHHHHHHHHHHHHHHSCCCHHHHHHHHTCSEEEEEECSEEEEEEEECTTS
T ss_pred HHHhhcCCCceeEechhhhcchhhhhhhccHHHHHHHHHHHHHHHhccccccccCCCCCCceEEEECCCChheEEcCCCC
Confidence 2211 00 023344445545 899999995 8888643
Q ss_pred ----eEEec---------------CC--cEEeccEEEEecCCCCccccccCCC-CCCCCC
Q 018704 313 ----KLILN---------------DG--TEVPYGLLVWSTGVGPSTLVKSLDL-PKSPGG 350 (351)
Q Consensus 313 ----~v~~~---------------~g--~~~~~D~vi~a~G~~p~~~~~~~gl-~~~~~G 350 (351)
+|++. +| ++++||.||+|+|++|+++ .|+ ++|++|
T Consensus 290 ~~v~~v~~~~~~l~~~~~~~~~~~~g~~~~i~~d~Vi~a~G~~p~~l---~gl~~~d~~g 346 (460)
T 1cjc_A 290 RRAAGIRLAVTRLEGIGEATRAVPTGDVEDLPCGLVLSSIGYKSRPI---DPSVPFDPKL 346 (460)
T ss_dssp SSEEEEEEEEEEEESSGGGCEEEEEEEEEEEECSEEEECCCEECCCC---CTTSCCBTTT
T ss_pred ceEEEEEEEEEEEccccCCCcccCCCceEEEEcCEEEECCCCCCCCC---CCCcccccCC
Confidence 25543 34 4799999999999999973 466 666543
No 90
>4b63_A L-ornithine N5 monooxygenase; oxidoreductase, siderophore, flavin; HET: FAD NAP; 1.90A {Aspergillus fumigatus} PDB: 4b64_A* 4b65_A* 4b66_A* 4b67_A* 4b68_A* 4b69_A*
Probab=99.90 E-value=3.1e-22 Score=192.64 Aligned_cols=187 Identities=12% Similarity=0.087 Sum_probs=118.4
Q ss_pred CCCCCCCcEEEECCchhHHHHHHhhhcc--------------CceEEEEcCCCccccchhh--hhhhcccc---------
Q 018704 57 TKANEKPRVVVLGSGWAGCRLMKGIDTS--------------LYDVVCVSPRNHMVFTPLL--ASTCVGTL--------- 111 (351)
Q Consensus 57 ~~~~~~~~VvIIG~G~aGl~aA~~L~~~--------------g~~v~vie~~~~~~~~~~~--~~~~~~~~--------- 111 (351)
++....+||||||+||+||++|..|.+. +...+.+|+++.+.|++.. ++......
T Consensus 34 tp~~~i~Dvi~IGaGp~gLa~A~~L~~~~~~~~~~~~~~~~~~~~~~f~e~~~~f~Wh~g~~~p~~~~q~~fl~Dlvtl~ 113 (501)
T 4b63_A 34 TPQDELHDLLCVGFGPASLAIAIALHDALDPRLNKSASNIHAQPKICFLERQKQFAWHSGMLVPGSKMQISFIKDLATLR 113 (501)
T ss_dssp CCTTSCEEEEEECCSHHHHHHHHHHHHHHCTTTCTTC----CCCCEEEEESSSSCCSSGGGCCTTCBCSSCGGGSSSTTT
T ss_pred CCCCCcCcEEEEcccHHHHHHHHHHHhcCCCceEEeccccCCCcceeeEeccCCCCcCCCCCCCCccccccchhhhcccc
Confidence 3445568999999999999999999753 3467899999887776422 22111110
Q ss_pred -------------------------cccccccchhccchhhhcCCCe-EEEEEEeeeEeCCC--------CEEEEEee--
Q 018704 112 -------------------------EFRSVAEPIARIQPAISREPGS-YFFLSHCAGIDTDN--------HVVHCETV-- 155 (351)
Q Consensus 112 -------------------------~~~~~~~~~~~~~~~~~~~~~~-~~~~~~v~~i~~~~--------~~v~~~~~-- 155 (351)
.+......+.++...++...+. ..+..+|+.+.... ..|.++..
T Consensus 114 ~P~s~~sf~~yl~~~~rl~~f~~~~~~~p~r~E~~~Yl~~~A~~~~~~vrf~~~V~~v~~~~~~~~~~~~~~~~V~~~~~ 193 (501)
T 4b63_A 114 DPRSSFTFLNYLHQKGRLIHFTNLSTFLPARLEFEDYMRWCAQQFSDVVAYGEEVVEVIPGKSDPSSSVVDFFTVRSRNV 193 (501)
T ss_dssp CTTCTTSHHHHHHHHTCHHHHHTTCCSCCBHHHHHHHHHHHHHTTGGGEEESEEEEEEEEECSSTTSSCBCEEEEEEEET
T ss_pred CCCCccchHHHHHHhCCccCCccccCCCCCHHHHHHHHHHHHHHcCCceEcceEEEeeccccccccccccceEEEEEecC
Confidence 0001112233333334444332 34556777775422 23555432
Q ss_pred cCccccCCCceeEeeccEEEEecCCCcCCCCCCCccccccccCCHHHHHHHHHHHHHhhhccCCCCCCHhhhcccCeEEE
Q 018704 156 TDELRTLEPWKFKISYDKLVIALGAEASTFGIHGVKENATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEKSRLLHCVV 235 (351)
Q Consensus 156 ~~~~~~~~~~~~~~~~d~lviAtG~~p~~p~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~v~V 235 (351)
..++ ..++.+++||+|||..|.+|.+++....+++...+.+...... .....+|+|+|
T Consensus 194 ~~g~------~~~~~ar~vVlatG~~P~iP~~~~~~g~v~Hss~y~~~~~~~~----------------~~~~~gKrV~V 251 (501)
T 4b63_A 194 ETGE------ISARRTRKVVIAIGGTAKMPSGLPQDPRIIHSSKYCTTLPALL----------------KDKSKPYNIAV 251 (501)
T ss_dssp TTCC------EEEEEEEEEEECCCCEECCCTTSCCCTTEEEGGGHHHHHHHHS----------------CCTTSCCEEEE
T ss_pred CCce------EEEEEeCEEEECcCCCCCCCCCCCCCcceeeccccccchhhcc----------------ccccCCcEEEE
Confidence 2333 3478999999999998998877766566777666554332111 01145679999
Q ss_pred ECCChHHHHHHHHHHHHHHHHHHhhhcCCCCccEEEEEeCCC
Q 018704 236 VGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANE 277 (351)
Q Consensus 236 vGgG~~a~e~a~~l~~~~~~~~~~~~~~~~~~~~v~~~~~~~ 277 (351)
||+|.||+|++.+|++.. ...+|+++.|+.
T Consensus 252 VG~G~SA~ei~~~L~~~~------------~~~~v~~~~R~~ 281 (501)
T 4b63_A 252 LGSGQSAAEIFHDLQKRY------------PNSRTTLIMRDS 281 (501)
T ss_dssp ECCSHHHHHHHHHHHHHS------------TTCEEEEECSSS
T ss_pred ECCcHHHHHHHHHHHhcC------------CCceEEEEeCCC
Confidence 999999999999997641 237899999974
No 91
>1w4x_A Phenylacetone monooxygenase; baeyer-villiger, FAD; HET: FAD; 1.7A {Thermobifida fusca} SCOP: c.3.1.5 c.3.1.5 PDB: 2ylr_A* 2yls_A* 2ylt_A* 2ym1_A* 2ylw_A* 2ym2_A* 2ylx_A* 2ylz_A*
Probab=99.90 E-value=2e-23 Score=203.04 Aligned_cols=172 Identities=14% Similarity=0.155 Sum_probs=107.8
Q ss_pred CCcEEEECCchhHHHHHHhhhccCceEEEEcCCCccccchh---hhhhhccc------cc----------ccc---cccc
Q 018704 62 KPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRNHMVFTPL---LASTCVGT------LE----------FRS---VAEP 119 (351)
Q Consensus 62 ~~~VvIIG~G~aGl~aA~~L~~~g~~v~vie~~~~~~~~~~---~~~~~~~~------~~----------~~~---~~~~ 119 (351)
.+||+|||||++|+++|..|++.|++|+|||+++....... .++..... .. +.. ....
T Consensus 16 ~~dVvIIGaG~aGl~aA~~L~~~G~~v~iiE~~~~~GG~w~~~~~pg~~~d~~~~~~~~~f~~~~~~~~~~~~~~~~~~~ 95 (542)
T 1w4x_A 16 EVDVLVVGAGFSGLYALYRLRELGRSVHVIETAGDVGGVWYWNRYPGARCDIESIEYCYSFSEEVLQEWNWTERYASQPE 95 (542)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTHHHHCCCTTCBCSSCTTTSSCCSCHHHHHHCCCCBSSCBHHH
T ss_pred CCCEEEECccHHHHHHHHHHHhCCCCEEEEeCCCCCCCcccccCCCceeecccccccccccChhhhhccCcccccCCHHH
Confidence 47999999999999999999999999999999875421110 00000000 00 000 0011
Q ss_pred hhccchhhhcCCC---eEEEEEEeeeEeCCC--CEEEEEeecCccccCCCceeEeeccEEEEecCC--CcCCCCCCCccc
Q 018704 120 IARIQPAISREPG---SYFFLSHCAGIDTDN--HVVHCETVTDELRTLEPWKFKISYDKLVIALGA--EASTFGIHGVKE 192 (351)
Q Consensus 120 ~~~~~~~~~~~~~---~~~~~~~v~~i~~~~--~~v~~~~~~~~~~~~~~~~~~~~~d~lviAtG~--~p~~p~i~g~~~ 192 (351)
+.++...+....+ ...+..+|+.++.+. ..|.++. .+|+ ++.||+||+|||. .|+.|.+||++.
T Consensus 96 i~~yl~~~~~~~~l~~~i~~~~~V~~~~~~~~~~~w~V~~-~~G~--------~~~ad~vV~AtG~~s~p~~p~i~G~~~ 166 (542)
T 1w4x_A 96 ILRYINFVADKFDLRSGITFHTTVTAAAFDEATNTWTVDT-NHGD--------RIRARYLIMASGQLSVPQLPNFPGLKD 166 (542)
T ss_dssp HHHHHHHHHHHTTGGGGEECSCCEEEEEEETTTTEEEEEE-TTCC--------EEEEEEEEECCCSCCCCCCCCCTTGGG
T ss_pred HHHHHHHHHHHcCCCceEEcCcEEEEEEEcCCCCeEEEEE-CCCC--------EEEeCEEEECcCCCCCCCCCCCCCccc
Confidence 1112111122111 223355777776543 4666654 4565 7999999999994 688999999753
Q ss_pred c---ccccCCHHHHHHHHHHHHHhhhccCCCCCCHhhhcccCeEEEECCChHHHHHHHHHHHHHHHHHHhhhcCCCCccE
Q 018704 193 N---ATFLREVHHAQEIRRKLLLNLMLSDVPGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIH 269 (351)
Q Consensus 193 ~---~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~v~VvGgG~~a~e~a~~l~~~~~~~~~~~~~~~~~~~~ 269 (351)
. .++...+.+ ... ...+|+|+|||+|.+|+|++..|...+ .+
T Consensus 167 f~G~~~hs~~~~~--------------~~~-------~~~gk~V~VIG~G~sg~e~a~~l~~~~--------------~~ 211 (542)
T 1w4x_A 167 FAGNLYHTGNWPH--------------EPV-------DFSGQRVGVIGTGSSGIQVSPQIAKQA--------------AE 211 (542)
T ss_dssp CCSEEEEGGGCCS--------------SCC-------CCBTCEEEEECCSHHHHHHHHHHHHHB--------------SE
T ss_pred CCCceEECCCCCC--------------chh-------ccCCCEEEEECCCccHHHHHHHHhhcC--------------ce
Confidence 1 122211110 000 024579999999999999999999876 89
Q ss_pred EEEEeCCC
Q 018704 270 VTLIEANE 277 (351)
Q Consensus 270 v~~~~~~~ 277 (351)
|++++|.+
T Consensus 212 vtv~~r~~ 219 (542)
T 1w4x_A 212 LFVFQRTP 219 (542)
T ss_dssp EEEEESSC
T ss_pred EEEEEcCC
Confidence 99999864
No 92
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=99.89 E-value=3.4e-23 Score=214.50 Aligned_cols=241 Identities=12% Similarity=0.101 Sum_probs=152.3
Q ss_pred CCCcEEEECCchhHHHHHHhhhccCc-eEEEEcCCCccccchhhhhhhcccccccccccchhccchhhhcCCCeEEEEEE
Q 018704 61 EKPRVVVLGSGWAGCRLMKGIDTSLY-DVVCVSPRNHMVFTPLLASTCVGTLEFRSVAEPIARIQPAISREPGSYFFLSH 139 (351)
Q Consensus 61 ~~~~VvIIG~G~aGl~aA~~L~~~g~-~v~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 139 (351)
..+||+|||||||||+||.+|++.|+ +|+|||+++.+... + ..+.+.+. +.....++...+....++.++...
T Consensus 186 ~~~~VvVIGgGpAGl~aA~~L~~~G~~~Vtv~E~~~~~GG~--~---~~~ip~~~-~~~~~~~~~~~~~~~~gv~~~~~~ 259 (1025)
T 1gte_A 186 YSAKIALLGAGPASISCASFLARLGYSDITIFEKQEYVGGL--S---TSEIPQFR-LPYDVVNFEIELMKDLGVKIICGK 259 (1025)
T ss_dssp GGCCEEEECCSHHHHHHHHHHHHTTCCCEEEEESSSSCSTH--H---HHTSCTTT-SCHHHHHHHHHHHHTTTCEEEESC
T ss_pred CCCEEEEECccHHHHHHHHHHHhcCCCcEEEEeCCCCCCcc--c---cccCCccc-CCHHHHHHHHHHHHHCCcEEEccc
Confidence 45799999999999999999999999 79999998764322 1 11222222 111122222233445578877665
Q ss_pred eeeEeCCCCEEEEEeecCccccCCCceeEeeccEEEEecCCC-cCCCCC-CCcc--ccccccCCHHHHHHHHHHHHHhh-
Q 018704 140 CAGIDTDNHVVHCETVTDELRTLEPWKFKISYDKLVIALGAE-ASTFGI-HGVK--ENATFLREVHHAQEIRRKLLLNL- 214 (351)
Q Consensus 140 v~~i~~~~~~v~~~~~~~~~~~~~~~~~~~~~d~lviAtG~~-p~~p~i-~g~~--~~~~~~~~~~~~~~~~~~~~~~~- 214 (351)
.... +.+.+ +++. .+.||+||||||+. |+.+++ +|++ +++++. .++....+......
T Consensus 260 ~v~~----~~v~~---~~~~--------~~~~d~vvlAtGa~~p~~l~~~~G~~~~~gv~~a---~~~L~~~~~~~~~~~ 321 (1025)
T 1gte_A 260 SLSE----NEITL---NTLK--------EEGYKAAFIGIGLPEPKTDDIFQGLTQDQGFYTS---KDFLPLVAKSSKAGM 321 (1025)
T ss_dssp CBST----TSBCH---HHHH--------HTTCCEEEECCCCCEECCCGGGTTCCTTTTEEEH---HHHHHHHHHHHCBTT
T ss_pred Eecc----ceEEh---hhcC--------ccCCCEEEEecCCCCCCCCCCCCCCCCCCCEEEh---HHHHHHHHhhccccc
Confidence 4421 22322 2232 57899999999994 887764 4553 233322 22221111110000
Q ss_pred --hccCCCCCCHhhhcccCeEEEECCChHHHHHHHHHHHHHHHHHHhhhcCCCCccEEEEEeCCC--CCCCCcHHHHHHH
Q 018704 215 --MLSDVPGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANE--ILSSFDDRLRHYA 290 (351)
Q Consensus 215 --~~~~~p~~~~~~~~~~~~v~VvGgG~~a~e~a~~l~~~~~~~~~~~~~~~~~~~~v~~~~~~~--~l~~~~~~~~~~~ 290 (351)
.....| ...++|+|||||++|+|+|..+.++|. .+|++++|.. .++.++.++
T Consensus 322 ~~~~~~~~-------~~~~~VvVIGgG~~g~e~A~~~~~~G~-------------~~Vtvv~r~~~~~~~~~~~e~---- 377 (1025)
T 1gte_A 322 CACHSPLP-------SIRGAVIVLGAGDTAFDCATSALRCGA-------------RRVFLVFRKGFVNIRAVPEEV---- 377 (1025)
T ss_dssp BSCCCCCC-------CCCSEEEEECSSHHHHHHHHHHHHTTC-------------SEEEEECSSCGGGCCSCHHHH----
T ss_pred cccccccc-------ccCCcEEEECCChHHHHHHHHHHHcCC-------------CEEEEEEecChhhCCCCHHHH----
Confidence 000111 123599999999999999999998771 3899999974 566666554
Q ss_pred HHHhhhcCcEEEcCe-EEEEeC--Ce---EEec------CC---------cEEeccEEEEecCCCCc--cccccC-CCCC
Q 018704 291 TTQLSKSGVRLVRGI-VKDVDS--QK---LILN------DG---------TEVPYGLLVWSTGVGPS--TLVKSL-DLPK 346 (351)
Q Consensus 291 ~~~l~~~gV~~~~~~-v~~v~~--~~---v~~~------~g---------~~~~~D~vi~a~G~~p~--~~~~~~-gl~~ 346 (351)
+.+++.||+++.+. ++++.. ++ |++. +| .++++|.||+|+|++|+ .|+.++ |+++
T Consensus 378 -~~~~~~Gv~~~~~~~~~~i~~~~g~v~~v~~~~~~~~~~g~~~~~~g~~~~i~aD~Vi~A~G~~~~~~~l~~~~~gl~~ 456 (1025)
T 1gte_A 378 -ELAKEEKCEFLPFLSPRKVIVKGGRIVAVQFVRTEQDETGKWNEDEDQIVHLKADVVISAFGSVLRDPKVKEALSPIKF 456 (1025)
T ss_dssp -HHHHHTTCEEECSEEEEEEEEETTEEEEEEEEEEEECTTSCEEEEEEEEEEEECSEEEECSCEECCCHHHHHHTTTSCB
T ss_pred -HHHHHcCCEEEeCCCceEEEccCCeEEEEEEEEeEEcCCCCcccCCCceEEEECCEEEECCCCCCCchhhhhcccCceE
Confidence 45677899999984 777753 32 3332 23 36899999999999864 677664 7888
Q ss_pred CCCC
Q 018704 347 SPGG 350 (351)
Q Consensus 347 ~~~G 350 (351)
|++|
T Consensus 457 ~~~G 460 (1025)
T 1gte_A 457 NRWD 460 (1025)
T ss_dssp CTTS
T ss_pred CCCC
Confidence 7666
No 93
>1y56_A Hypothetical protein PH1363; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=99.89 E-value=2.4e-23 Score=200.20 Aligned_cols=209 Identities=16% Similarity=0.156 Sum_probs=142.7
Q ss_pred CCcEEEECCchhHHHHHHhhhccCceEEEEcCCCccccchhhhh-hhcccccccccccchhccchhhhcCCCeEE-EEEE
Q 018704 62 KPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRNHMVFTPLLAS-TCVGTLEFRSVAEPIARIQPAISREPGSYF-FLSH 139 (351)
Q Consensus 62 ~~~VvIIG~G~aGl~aA~~L~~~g~~v~vie~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 139 (351)
.+||+|||||++||++|.+|++. ++|+|||+++...+...... ...+... ........+...+ ..++.+ ....
T Consensus 108 ~~dVvIIGgG~aGl~aA~~L~~~-~~V~vie~~~~~GG~~~~~~~~~~g~~~--~~~~~~~~l~~~l--~~~v~~~~~~~ 182 (493)
T 1y56_A 108 VVDVAIIGGGPAGIGAALELQQY-LTVALIEERGWLGGDMWLKGIKQEGFNK--DSRKVVEELVGKL--NENTKIYLETS 182 (493)
T ss_dssp EESCCEECCSHHHHHHHHHHTTT-CCEEEECTTSSSSCSGGGTCSEETTTTE--EHHHHHHHHHHTC--CTTEEEETTEE
T ss_pred cCCEEEECccHHHHHHHHHHHhc-CCEEEEeCCCCCCCeeeccccccCCCCC--CHHHHHHHHHHHH--hcCCEEEcCCE
Confidence 46999999999999999999999 99999999887644321110 0001110 1111112222222 346664 3468
Q ss_pred eeeEeCCCCEEEEEeecCccccCCCceeEeeccEEEEecCCCcCCCCCCCcc-ccccccCCHHHHHHHHHHHHHhhhccC
Q 018704 140 CAGIDTDNHVVHCETVTDELRTLEPWKFKISYDKLVIALGAEASTFGIHGVK-ENATFLREVHHAQEIRRKLLLNLMLSD 218 (351)
Q Consensus 140 v~~i~~~~~~v~~~~~~~~~~~~~~~~~~~~~d~lviAtG~~p~~p~i~g~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 218 (351)
|..++.+.+.+.+...++++ ...+.||+||+|||+.|+.|++||.+ +.+++ ..++..+.+.. ..
T Consensus 183 v~~i~~~~~~~~~~~~~~~~------~~~~~~d~lvlAtGa~~~~~~~~g~~~~gv~~---~~~~~~~~~~~------~~ 247 (493)
T 1y56_A 183 ALGVFDKGEYFLVPVVRGDK------LIEILAKRVVLATGAIDSTMLFENNDMPGVFR---RDFALEVMNVW------EV 247 (493)
T ss_dssp ECCCEECSSSEEEEEEETTE------EEEEEESCEEECCCEEECCCCCTTTTSTTEEE---HHHHHHHHHTS------CB
T ss_pred EEEEEcCCcEEEEEEecCCe------EEEEECCEEEECCCCCccCCCCCCCCCCCEEE---cHHHHHHHHhc------cc
Confidence 88888887766554333332 23689999999999999999999975 33433 22333222210 11
Q ss_pred CCCCCHhhhcccCeEEEECCChHHHHHHHHHHHHHHHHHHhhhcCCCCccEEEEEeCCCCCCCCcHHHHHHHHHHhhhcC
Q 018704 219 VPGISEEEKSRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEILSSFDDRLRHYATTQLSKSG 298 (351)
Q Consensus 219 ~p~~~~~~~~~~~~v~VvGgG~~a~e~a~~l~~~~~~~~~~~~~~~~~~~~v~~~~~~~~l~~~~~~~~~~~~~~l~~~g 298 (351)
...++++|||+|++|+| +.+++.|
T Consensus 248 ---------~~~~~vvViGgG~~gle-----------------------------------------------~~l~~~G 271 (493)
T 1y56_A 248 ---------APGRKVAVTGSKADEVI-----------------------------------------------QELERWG 271 (493)
T ss_dssp ---------CSCSEEEEESTTHHHHH-----------------------------------------------HHHHHHT
T ss_pred ---------CCCCEEEEECCCHHHHH-----------------------------------------------HHHHhCC
Confidence 23469999999999877 2345679
Q ss_pred cEEEcCe-EEEEeCC----eEEecCCcEEeccEEEEecCCCCc-cccccCCCCC
Q 018704 299 VRLVRGI-VKDVDSQ----KLILNDGTEVPYGLLVWSTGVGPS-TLVKSLDLPK 346 (351)
Q Consensus 299 V~~~~~~-v~~v~~~----~v~~~~g~~~~~D~vi~a~G~~p~-~~~~~~gl~~ 346 (351)
|+++.+. |+++..+ .+.+.+|+++++|.||+|+|++|+ ++++.+|+++
T Consensus 272 V~v~~~~~v~~i~~~~~v~~v~~~~g~~i~aD~Vv~a~G~~p~~~l~~~~g~~~ 325 (493)
T 1y56_A 272 IDYVHIPNVKRVEGNEKVERVIDMNNHEYKVDALIFADGRRPDINPITQAGGKL 325 (493)
T ss_dssp CEEEECSSEEEEECSSSCCEEEETTCCEEECSEEEECCCEEECCHHHHHTTCCE
T ss_pred cEEEeCCeeEEEecCCceEEEEeCCCeEEEeCEEEECCCcCcCchHHHhcCCCc
Confidence 9999995 9998764 477888999999999999999999 7998888764
No 94
>2ywl_A Thioredoxin reductase related protein; uncharacterized conserved protein, rossmann fold, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2cvj_A*
Probab=99.29 E-value=7.9e-12 Score=103.30 Aligned_cols=100 Identities=22% Similarity=0.354 Sum_probs=81.5
Q ss_pred eEEEECCChHHHHHHHHHHHHHHHHHHhhhcCCCCccEEEEEeCCC-CC---------CCC-----cHHHHHHHHHHhhh
Q 018704 232 HCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANE-IL---------SSF-----DDRLRHYATTQLSK 296 (351)
Q Consensus 232 ~v~VvGgG~~a~e~a~~l~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~l---------~~~-----~~~~~~~~~~~l~~ 296 (351)
+++|||||++|+++|..|.+.+ .+|+++++.+ .+ +.+ +.++.+.+.+.+++
T Consensus 3 ~vvIIGgG~~Gl~~A~~l~~~g--------------~~v~lie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 68 (180)
T 2ywl_A 3 DVIVVGGGPSGLSAALFLARAG--------------LKVLVLDGGRSKVKGVSRVPNYPGLLDEPSGEELLRRLEAHARR 68 (180)
T ss_dssp EEEEECCSHHHHHHHHHHHHTT--------------CCEEEEECSCCTTTTCSCCCCSTTCTTCCCHHHHHHHHHHHHHH
T ss_pred eEEEECCCHHHHHHHHHHHHCC--------------CcEEEEeCCCCcccCchhhhccCCCcCCCCHHHHHHHHHHHHHH
Confidence 7999999999999999999877 8999999864 33 223 46788889999999
Q ss_pred cCcEEEcCeEEEEeC--C--eEEecCCcEEeccEEEEecCCCCccccccCCCCCC
Q 018704 297 SGVRLVRGIVKDVDS--Q--KLILNDGTEVPYGLLVWSTGVGPSTLVKSLDLPKS 347 (351)
Q Consensus 297 ~gV~~~~~~v~~v~~--~--~v~~~~g~~~~~D~vi~a~G~~p~~~~~~~gl~~~ 347 (351)
.||+++.++|++++. + .+.+++| ++++|.||+|+|.+|+ +++.+|++.+
T Consensus 69 ~gv~v~~~~v~~i~~~~~~~~v~~~~g-~i~ad~vI~A~G~~~~-~~~~~g~~~~ 121 (180)
T 2ywl_A 69 YGAEVRPGVVKGVRDMGGVFEVETEEG-VEKAERLLLCTHKDPT-LPSLLGLTRR 121 (180)
T ss_dssp TTCEEEECCCCEEEECSSSEEEECSSC-EEEEEEEEECCTTCCH-HHHHHTCCEE
T ss_pred cCCEEEeCEEEEEEEcCCEEEEEECCC-EEEECEEEECCCCCCC-ccccCCCCcc
Confidence 999999998777764 2 4666777 8999999999999986 3455666654
No 95
>2cul_A Glucose-inhibited division protein A-related PROT probable oxidoreductase; rossmann fold, protein-FAD complex; HET: FAD; 1.65A {Thermus thermophilus} SCOP: c.3.1.7
Probab=99.21 E-value=3e-11 Score=104.16 Aligned_cols=118 Identities=14% Similarity=0.113 Sum_probs=73.3
Q ss_pred CCcEEEECCchhHHHHHHhhhccCceEEEEcCCCccccchhhhhhhccccccccc-----------ccchhccc-hhhhc
Q 018704 62 KPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRNHMVFTPLLASTCVGTLEFRSV-----------AEPIARIQ-PAISR 129 (351)
Q Consensus 62 ~~~VvIIG~G~aGl~aA~~L~~~g~~v~vie~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~-~~~~~ 129 (351)
.+||+|||||++|+++|..|++.|.+|+|||+.......+.. ...+......+ ...+.... ..+..
T Consensus 3 ~~dVvVVGgG~aGl~aA~~la~~g~~v~lie~~~~~~G~~~~--~~~~~~~~~~~~~~~~d~~g~~~~~~~~~l~~~~~~ 80 (232)
T 2cul_A 3 AYQVLIVGAGFSGAETAFWLAQKGVRVGLLTQSLDAVMMPFL--PPKPPFPPGSLLERAYDPKDERVWAFHARAKYLLEG 80 (232)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEEEESCGGGTTCCSS--CCCSCCCTTCHHHHHCCTTCCCHHHHHHHHHHHHHT
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCCEEEEecCCCcCCcccC--ccccccchhhHHhhhccCCCCCHHHHHHHHHHHHHc
Confidence 489999999999999999999999999999997321110000 00000000000 00111222 22333
Q ss_pred CCCeEEEEEEeeeEeCCCCEE-EEEeecCccccCCCceeEeeccEEEEecCCCcCCCCCCCc
Q 018704 130 EPGSYFFLSHCAGIDTDNHVV-HCETVTDELRTLEPWKFKISYDKLVIALGAEASTFGIHGV 190 (351)
Q Consensus 130 ~~~~~~~~~~v~~i~~~~~~v-~~~~~~~~~~~~~~~~~~~~~d~lviAtG~~p~~p~i~g~ 190 (351)
..++.++..+|+.+..+...+ .+. ..++. ++.+|.||+|||.......++|.
T Consensus 81 ~~gv~i~~~~v~~i~~~~~~v~~v~-~~~g~--------~i~a~~VV~A~G~~s~~~~~~G~ 133 (232)
T 2cul_A 81 LRPLHLFQATATGLLLEGNRVVGVR-TWEGP--------PARGEKVVLAVGSFLGARLFLGG 133 (232)
T ss_dssp CTTEEEEECCEEEEEEETTEEEEEE-ETTSC--------CEECSEEEECCTTCSSCEEEETT
T ss_pred CCCcEEEEeEEEEEEEeCCEEEEEE-ECCCC--------EEECCEEEECCCCChhhceecCC
Confidence 348888888899988765554 333 24555 79999999999997655444554
No 96
>3ces_A MNMG, tRNA uridine 5-carboxymethylaminomethyl modificat GIDA, GIDA; tRNA modification, FAD binding domain, structural genomics; 2.41A {Escherichia coli} PDB: 3cp2_A 3g05_A
Probab=99.20 E-value=2.5e-11 Score=118.20 Aligned_cols=120 Identities=17% Similarity=0.213 Sum_probs=74.8
Q ss_pred CCcEEEECCchhHHHHHHhhhccCceEEEEcCCCc-cccc---hhhhh-----------hhccc---------cccccc-
Q 018704 62 KPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRNH-MVFT---PLLAS-----------TCVGT---------LEFRSV- 116 (351)
Q Consensus 62 ~~~VvIIG~G~aGl~aA~~L~~~g~~v~vie~~~~-~~~~---~~~~~-----------~~~~~---------~~~~~~- 116 (351)
.+||+|||||+||++||..|++.|.+|+|||+... .... +...+ ...+. ..+..+
T Consensus 28 ~yDVIVIGgG~AGl~AAlaLAr~G~kVlLIEk~~~~iG~~~Cnps~ggia~~~lv~ei~algg~~~~~~d~~gi~f~~l~ 107 (651)
T 3ces_A 28 PFDVIIIGGGHAGTEAAMAAARMGQQTLLLTHNIDTLGQMSCNPAIGGIGKGHLVKEVDALGGLMAKAIDQAGIQFRILN 107 (651)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEEESCGGGTTCCSSSSEEESTTHHHHHHHHHHTTCSHHHHHHHHEEEEEEES
T ss_pred cCCEEEECChHHHHHHHHHHHhCCCCEEEEeecccccccccccccccchhhHHHHHHHHHhccHHHHHhhhcccchhhhh
Confidence 58999999999999999999999999999998742 1110 00000 00000 000000
Q ss_pred ------c---------cchhcc-chhhhcCCCeEEEEEEeeeEeCCCCEE-EEEeecCccccCCCceeEeeccEEEEecC
Q 018704 117 ------A---------EPIARI-QPAISREPGSYFFLSHCAGIDTDNHVV-HCETVTDELRTLEPWKFKISYDKLVIALG 179 (351)
Q Consensus 117 ------~---------~~~~~~-~~~~~~~~~~~~~~~~v~~i~~~~~~v-~~~~~~~~~~~~~~~~~~~~~d~lviAtG 179 (351)
. ..+... ...+....++.++..+|+.+..+.+.+ .+.. .+|. .+.+|.||+|||
T Consensus 108 ~~kgpav~~~r~~~Dr~~~~~~L~e~Le~~~GV~I~~~~V~~L~~e~g~V~GV~t-~dG~--------~I~Ad~VVLATG 178 (651)
T 3ces_A 108 ASKGPAVRATRAQADRVLYRQAVRTALENQPNLMIFQQAVEDLIVENDRVVGAVT-QMGL--------KFRAKAVVLTVG 178 (651)
T ss_dssp TTSCGGGCEEEEEECHHHHHHHHHHHHHTCTTEEEEECCEEEEEESSSBEEEEEE-TTSE--------EEEEEEEEECCS
T ss_pred cccCcccccchhhCCHHHHHHHHHHHHHhCCCCEEEEEEEEEEEecCCEEEEEEE-CCCC--------EEECCEEEEcCC
Confidence 0 001111 122223368888888999997665544 3332 4555 899999999999
Q ss_pred CCcCCCCCCCc
Q 018704 180 AEASTFGIHGV 190 (351)
Q Consensus 180 ~~p~~p~i~g~ 190 (351)
..+..+.++|.
T Consensus 179 t~s~~~~i~G~ 189 (651)
T 3ces_A 179 TFLDGKIHIGL 189 (651)
T ss_dssp TTTCCEEECC-
T ss_pred CCccCccccCc
Confidence 99887777775
No 97
>2gqf_A Hypothetical protein HI0933; structural genomics, FAD-utilizing protein, flavoprotein, PS protein structure initiative; HET: FAD; 2.70A {Haemophilus influenzae} SCOP: c.3.1.8 e.74.1.1
Probab=99.18 E-value=8.2e-12 Score=116.53 Aligned_cols=36 Identities=14% Similarity=0.163 Sum_probs=33.4
Q ss_pred CCcEEEECCchhHHHHHHhhhccCceEEEEcCCCcc
Q 018704 62 KPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRNHM 97 (351)
Q Consensus 62 ~~~VvIIG~G~aGl~aA~~L~~~g~~v~vie~~~~~ 97 (351)
.+||+|||||++|+++|+.|++.|.+|+|||+.+..
T Consensus 4 ~~dViIIGgG~aGl~aA~~la~~G~~V~vlEk~~~~ 39 (401)
T 2gqf_A 4 YSENIIIGAGAAGLFCAAQLAKLGKSVTVFDNGKKI 39 (401)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSS
T ss_pred CCCEEEECCcHHHHHHHHHHHhCCCCEEEEeCCCCC
Confidence 479999999999999999999999999999988754
No 98
>2ywl_A Thioredoxin reductase related protein; uncharacterized conserved protein, rossmann fold, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2cvj_A*
Probab=99.13 E-value=7.8e-11 Score=97.25 Aligned_cols=110 Identities=17% Similarity=0.166 Sum_probs=70.3
Q ss_pred CcEEEECCchhHHHHHHhhhccCceEEEEcCCCccccch-hhhhhhcccccccccccchhccchhhhcCCCeEEEEEEee
Q 018704 63 PRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRNHMVFTP-LLASTCVGTLEFRSVAEPIARIQPAISREPGSYFFLSHCA 141 (351)
Q Consensus 63 ~~VvIIG~G~aGl~aA~~L~~~g~~v~vie~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 141 (351)
+||+|||||++|+.+|..|++.|.+|+|+|+.+...... .+.. ..+.+. ......+.+.........++.++..+|+
T Consensus 2 ~~vvIIGgG~~Gl~~A~~l~~~g~~v~lie~~~~~~~~~~~~~~-~~~~~~-~~~~~~~~~~l~~~~~~~gv~v~~~~v~ 79 (180)
T 2ywl_A 2 WDVIVVGGGPSGLSAALFLARAGLKVLVLDGGRSKVKGVSRVPN-YPGLLD-EPSGEELLRRLEAHARRYGAEVRPGVVK 79 (180)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEEECSCCTTTTCSCCCC-STTCTT-CCCHHHHHHHHHHHHHHTTCEEEECCCC
T ss_pred CeEEEECCCHHHHHHHHHHHHCCCcEEEEeCCCCcccCchhhhc-cCCCcC-CCCHHHHHHHHHHHHHHcCCEEEeCEEE
Confidence 689999999999999999999999999999877432110 0000 000000 0001122222222333446777666888
Q ss_pred eEeCCCCEEEEEeecCccccCCCceeEeeccEEEEecCCCcCC
Q 018704 142 GIDTDNHVVHCETVTDELRTLEPWKFKISYDKLVIALGAEAST 184 (351)
Q Consensus 142 ~i~~~~~~v~~~~~~~~~~~~~~~~~~~~~d~lviAtG~~p~~ 184 (351)
.++.+...+.+.. +++ ++.+|.||+|+|..|..
T Consensus 80 ~i~~~~~~~~v~~-~~g---------~i~ad~vI~A~G~~~~~ 112 (180)
T 2ywl_A 80 GVRDMGGVFEVET-EEG---------VEKAERLLLCTHKDPTL 112 (180)
T ss_dssp EEEECSSSEEEEC-SSC---------EEEEEEEEECCTTCCHH
T ss_pred EEEEcCCEEEEEE-CCC---------EEEECEEEECCCCCCCc
Confidence 8887666565543 222 68999999999998754
No 99
>2zxi_A TRNA uridine 5-carboxymethylaminomethyl modificat MNMG; modification, 5-carboxymethylaminomethyl uridine, WOBB uridine, FAD; HET: FAD; 2.30A {Aquifex aeolicus} PDB: 2zxh_A* 2e57_A*
Probab=99.08 E-value=1.8e-10 Score=111.86 Aligned_cols=120 Identities=15% Similarity=0.151 Sum_probs=75.9
Q ss_pred CCcEEEECCchhHHHHHHhhhccCceEEEEcCCC-ccccc---hhhhh---------h--hccc---------cccc---
Q 018704 62 KPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRN-HMVFT---PLLAS---------T--CVGT---------LEFR--- 114 (351)
Q Consensus 62 ~~~VvIIG~G~aGl~aA~~L~~~g~~v~vie~~~-~~~~~---~~~~~---------~--~~~~---------~~~~--- 114 (351)
.+||+|||||+||++||..|++.|.+|+|||++. ..... +...+ . ..+. ..+.
T Consensus 27 ~yDVIVIGgG~AGl~AAlalAr~G~kVlLIEk~~~~iG~~~Cnps~GGia~g~lv~eldalgg~~~~~~d~~gi~f~~l~ 106 (637)
T 2zxi_A 27 EFDVVVIGGGHAGIEAALAAARMGAKTAMFVLNADTIGQMSCNPAIGGIAKGIVVREIDALGGEMGKAIDQTGIQFKMLN 106 (637)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEEEESCGGGTTCCCSCSEEECTTHHHHHHHHHHHTCSHHHHHHHHEEEEEEES
T ss_pred cCCEEEECCCHHHHHHHHHHHHCCCCEEEEEecccccCCcCccccccccchHHHHHHHHHhhhHHHHHhhhcccceeecc
Confidence 4899999999999999999999999999999874 21110 00000 0 0000 0000
Q ss_pred ----ccc---------cchhc-cchhhhcCCCeEEEEEEeeeEeCCCCEEE-EEeecCccccCCCceeEeeccEEEEecC
Q 018704 115 ----SVA---------EPIAR-IQPAISREPGSYFFLSHCAGIDTDNHVVH-CETVTDELRTLEPWKFKISYDKLVIALG 179 (351)
Q Consensus 115 ----~~~---------~~~~~-~~~~~~~~~~~~~~~~~v~~i~~~~~~v~-~~~~~~~~~~~~~~~~~~~~d~lviAtG 179 (351)
... ..+.. +...+....++.++...|+.+..+.+.+. +.. .+|. .+.++.||+|||
T Consensus 107 ~~kGpav~~~r~~~Dr~~~~~~L~~~Le~~~GVeI~~~~Vt~L~~e~g~V~GV~t-~dG~--------~i~AdaVVLATG 177 (637)
T 2zxi_A 107 TRKGKAVQSPRAQADKKRYREYMKKVCENQENLYIKQEEVVDIIVKNNQVVGVRT-NLGV--------EYKTKAVVVTTG 177 (637)
T ss_dssp TTSCGGGCEEEEEECHHHHHHHHHHHHHTCTTEEEEESCEEEEEESSSBEEEEEE-TTSC--------EEECSEEEECCT
T ss_pred cccCccccchhhhCCHHHHHHHHHHHHHhCCCCEEEEeEEEEEEecCCEEEEEEE-CCCc--------EEEeCEEEEccC
Confidence 000 00111 11223333688888889999887666543 333 4565 899999999999
Q ss_pred CCcCCCCCCCc
Q 018704 180 AEASTFGIHGV 190 (351)
Q Consensus 180 ~~p~~p~i~g~ 190 (351)
..+..+.++|.
T Consensus 178 ~~s~~~~~~G~ 188 (637)
T 2zxi_A 178 TFLNGVIYIGD 188 (637)
T ss_dssp TCBTCEEEETT
T ss_pred CCccCceeccc
Confidence 99887777775
No 100
>3fpz_A Thiazole biosynthetic enzyme; FAD, mitochondrion, N thiamine biosynthesis, transit peptide, biosynthetic protei; HET: AHZ; 1.82A {Saccharomyces cerevisiae}
Probab=99.07 E-value=3.5e-12 Score=115.82 Aligned_cols=38 Identities=16% Similarity=0.151 Sum_probs=33.3
Q ss_pred CCCcEEEECCchhHHHHHHhhh--ccCceEEEEcCCCccc
Q 018704 61 EKPRVVVLGSGWAGCRLMKGID--TSLYDVVCVSPRNHMV 98 (351)
Q Consensus 61 ~~~~VvIIG~G~aGl~aA~~L~--~~g~~v~vie~~~~~~ 98 (351)
..+||+|||||||||+||++|+ +.|++|+|||+++...
T Consensus 64 ~~~DV~IIGaGPAGlsAA~~la~~r~G~~V~viEk~~~~G 103 (326)
T 3fpz_A 64 AVSDVIIVGAGSSGLSAAYVIAKNRPDLKVCIIESSVAPG 103 (326)
T ss_dssp TEESEEEECCSHHHHHHHHHHHHHCTTSCEEEECSSSSCC
T ss_pred cCCCEEEECCCHHHHHHHHHHHHhCCCCeEEEEECCCCCC
Confidence 3579999999999999999996 4699999999987643
No 101
>3v76_A Flavoprotein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: FDA; 2.51A {Sinorhizobium meliloti}
Probab=98.99 E-value=6e-10 Score=104.33 Aligned_cols=37 Identities=24% Similarity=0.253 Sum_probs=33.1
Q ss_pred CCCcEEEECCchhHHHHHHhhhccCceEEEEcCCCcc
Q 018704 61 EKPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRNHM 97 (351)
Q Consensus 61 ~~~~VvIIG~G~aGl~aA~~L~~~g~~v~vie~~~~~ 97 (351)
..+||+|||||++|+++|+.|++.|.+|+|+|+.+..
T Consensus 26 ~~~dViIIGgG~AGl~aA~~La~~G~~V~llEk~~~~ 62 (417)
T 3v76_A 26 EKQDVVIIGAGAAGMMCAIEAGKRGRRVLVIDHARAP 62 (417)
T ss_dssp --CCEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSS
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCcEEEEeCCCCC
Confidence 4589999999999999999999999999999988754
No 102
>3cp8_A TRNA uridine 5-carboxymethylaminomethyl modification enzyme GIDA; rossmann fold, FAD-binding domain, dinucleotide-binding motif; HET: FAD; 3.20A {Chlorobium tepidum}
Probab=98.98 E-value=4e-10 Score=109.69 Aligned_cols=120 Identities=16% Similarity=0.262 Sum_probs=74.6
Q ss_pred CCCcEEEECCchhHHHHHHhhhccCceEEEEcCCCc-cccc---hhhhh-----------hhccc---------ccccc-
Q 018704 61 EKPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRNH-MVFT---PLLAS-----------TCVGT---------LEFRS- 115 (351)
Q Consensus 61 ~~~~VvIIG~G~aGl~aA~~L~~~g~~v~vie~~~~-~~~~---~~~~~-----------~~~~~---------~~~~~- 115 (351)
..+||+|||||+||++||..|++.|.+|+|||+... .... +...+ ...+. ..+..
T Consensus 20 ~~yDVIVIGgG~AGl~AAlaLAr~G~kVlLIEk~~~~iG~~~c~ps~gGia~~~lv~el~al~g~~~~~~d~~gi~f~~l 99 (641)
T 3cp8_A 20 HMYDVIVVGAGHAGCEAALAVARGGLHCLLITSDLSAVARMSCNPAIGGVAKGQITREIDALGGEMGKAIDATGIQFRML 99 (641)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTTCCEEEEESCGGGTTCCSSCSEEECHHHHHHHHHHHHHTCSHHHHHHHHEEEEEEE
T ss_pred CcCCEEEECccHHHHHHHHHHHHCCCcEEEEEecccccCCCccccchhhhhHHHHHHHHHhcccHHHHHHHhcCCchhhc
Confidence 358999999999999999999999999999998742 1110 00000 00000 00000
Q ss_pred -------c------c---cchhccchhhhcCCCeEEEEEEeeeEeCCCCEEE-EEeecCccccCCCceeEeeccEEEEec
Q 018704 116 -------V------A---EPIARIQPAISREPGSYFFLSHCAGIDTDNHVVH-CETVTDELRTLEPWKFKISYDKLVIAL 178 (351)
Q Consensus 116 -------~------~---~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~v~-~~~~~~~~~~~~~~~~~~~~d~lviAt 178 (351)
+ . .....+...+...+++.++...|+.+..+...+. +.. .+|. .+.+|.||+||
T Consensus 100 ~~~kgpav~~~r~~~Dr~~l~~~L~~~l~~~~GV~I~~~~V~~L~~d~g~V~GV~t-~~G~--------~i~Ad~VVLAT 170 (641)
T 3cp8_A 100 NRSKGPAMHSPRAQADKTQYSLYMRRIVEHEPNIDLLQDTVIGVSANSGKFSSVTV-RSGR--------AIQAKAAILAC 170 (641)
T ss_dssp CSSSCTTTCEEEEEECHHHHHHHHHHHHHTCTTEEEEECCEEEEEEETTEEEEEEE-TTSC--------EEEEEEEEECC
T ss_pred ccccCccccchhhhcCHHHHHHHHHHHHHhCCCCEEEeeEEEEEEecCCEEEEEEE-CCCc--------EEEeCEEEECc
Confidence 0 0 0011112223334688888888988877666654 433 4555 89999999999
Q ss_pred CCCcCCCCCCC
Q 018704 179 GAEASTFGIHG 189 (351)
Q Consensus 179 G~~p~~p~i~g 189 (351)
|..++.+.++|
T Consensus 171 G~~s~~~i~~G 181 (641)
T 3cp8_A 171 GTFLNGLIHIG 181 (641)
T ss_dssp TTCBTCEEEET
T ss_pred CCCCCccceee
Confidence 99876554444
No 103
>3nlc_A Uncharacterized protein VP0956; FAD-binding protein, NESG, structural genomics, PSI-2, prote structure initiative; HET: FAD; 2.15A {Vibrio parahaemolyticus}
Probab=98.97 E-value=9.5e-10 Score=106.06 Aligned_cols=38 Identities=18% Similarity=0.156 Sum_probs=34.5
Q ss_pred CCCCCcEEEECCchhHHHHHHhhhccCceEEEEcCCCc
Q 018704 59 ANEKPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRNH 96 (351)
Q Consensus 59 ~~~~~~VvIIG~G~aGl~aA~~L~~~g~~v~vie~~~~ 96 (351)
....+||+|||||++||++|+.|++.|++|+|||+.+.
T Consensus 104 ~~~~~DVVIVGgGpaGL~aA~~La~~G~kV~VlEr~~~ 141 (549)
T 3nlc_A 104 ENLTERPIVIGFGPCGLFAGLVLAQMGFNPIIVERGKE 141 (549)
T ss_dssp TTCCCCCEEECCSHHHHHHHHHHHHTTCCCEEECSSCC
T ss_pred cCCCCCEEEECcCHHHHHHHHHHHHCCCeEEEEEccCc
Confidence 34568999999999999999999999999999998864
No 104
>3dme_A Conserved exported protein; structural genomics, PSI-2, PROT structure initiative, northeast structural genomics consort NESG; HET: FAD TLA; 1.70A {Bordetella pertussis}
Probab=98.96 E-value=1.3e-08 Score=93.20 Aligned_cols=63 Identities=14% Similarity=0.216 Sum_probs=49.5
Q ss_pred cHHHHHHHHHHhhhcCcEEEcCe-EEEEeC--C---eEEecCC--cEEeccEEEEecCCCCccccccC-CCC
Q 018704 283 DDRLRHYATTQLSKSGVRLVRGI-VKDVDS--Q---KLILNDG--TEVPYGLLVWSTGVGPSTLVKSL-DLP 345 (351)
Q Consensus 283 ~~~~~~~~~~~l~~~gV~~~~~~-v~~v~~--~---~v~~~~g--~~~~~D~vi~a~G~~p~~~~~~~-gl~ 345 (351)
+..+.+.+.+.+++.|++++++. |+++.. + .|.+.+| .++.||.||+|+|.+...+++.+ |++
T Consensus 149 ~~~~~~~l~~~~~~~Gv~i~~~~~v~~i~~~~~~~~~v~~~~g~~~~~~a~~VV~A~G~~s~~l~~~~~g~~ 220 (369)
T 3dme_A 149 SHALMLAYQGDAESDGAQLVFHTPLIAGRVRPEGGFELDFGGAEPMTLSCRVLINAAGLHAPGLARRIEGIP 220 (369)
T ss_dssp HHHHHHHHHHHHHHTTCEEECSCCEEEEEECTTSSEEEEECTTSCEEEEEEEEEECCGGGHHHHHHTEETSC
T ss_pred HHHHHHHHHHHHHHCCCEEECCCEEEEEEEcCCceEEEEECCCceeEEEeCEEEECCCcchHHHHHHhcCCC
Confidence 35778888889999999999994 988864 2 3566677 47999999999999877777666 553
No 105
>1rp0_A ARA6, thiazole biosynthetic enzyme; protein ligand complex, biosynthetic protein; HET: AHZ HTO; 1.60A {Arabidopsis thaliana} SCOP: c.3.1.6
Probab=98.96 E-value=1.9e-09 Score=95.77 Aligned_cols=121 Identities=16% Similarity=0.060 Sum_probs=69.6
Q ss_pred CCcEEEECCchhHHHHHHhhhcc-CceEEEEcCCCccccchhhhhhh----------------ccccccc--------cc
Q 018704 62 KPRVVVLGSGWAGCRLMKGIDTS-LYDVVCVSPRNHMVFTPLLASTC----------------VGTLEFR--------SV 116 (351)
Q Consensus 62 ~~~VvIIG~G~aGl~aA~~L~~~-g~~v~vie~~~~~~~~~~~~~~~----------------~~~~~~~--------~~ 116 (351)
.+||+|||||++|+++|..|++. |.+|+|||+.+......+..+.. .+.+... ..
T Consensus 39 ~~dVvIIGgG~aGl~aA~~la~~~G~~V~viEk~~~~gg~~~~~~~~~~~~~~~~~~~~~l~~~G~~~~~~~~~~~~~~~ 118 (284)
T 1rp0_A 39 ETDVVVVGAGSAGLSAAYEISKNPNVQVAIIEQSVSPGGGAWLGGQLFSAMIVRKPAHLFLDEIGVAYDEQDTYVVVKHA 118 (284)
T ss_dssp EEEEEEECCSHHHHHHHHHHHTSTTSCEEEEESSSSCCTTTTCCSTTCCCEEEETTTHHHHHHHTCCCEECSSEEEESCH
T ss_pred ccCEEEECccHHHHHHHHHHHHcCCCeEEEEECCCCCCCceecCCcchHHHHcCcHHHHHHHHcCCCcccCCCEEEecCH
Confidence 47999999999999999999997 99999999987542111000000 0110000 00
Q ss_pred ccchhccchhhhcCCCeEEEE-EEeeeEeCCCCEE-EEEee------c--CccccCCCceeEeeccEEEEecCCCcCCC
Q 018704 117 AEPIARIQPAISREPGSYFFL-SHCAGIDTDNHVV-HCETV------T--DELRTLEPWKFKISYDKLVIALGAEASTF 185 (351)
Q Consensus 117 ~~~~~~~~~~~~~~~~~~~~~-~~v~~i~~~~~~v-~~~~~------~--~~~~~~~~~~~~~~~d~lviAtG~~p~~p 185 (351)
......+...+....++.++. .+|+.+..+...+ .+... . ++. ..+...+.+|.||+|+|..+...
T Consensus 119 ~~~~~~l~~~~~~~~gv~i~~~~~V~~i~~~~~~v~gv~~~~~~~~~~~~~g~---~g~~~~i~ad~VV~AtG~~s~~~ 194 (284)
T 1rp0_A 119 ALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGNRVGGVVTNWALVAQNHHTQS---CMDPNVMEAKIVVSSCGHDGPFG 194 (284)
T ss_dssp HHHHHHHHHHHHTSTTEEEEETEEEEEEEEETTEEEEEEEEEHHHHTCTTTSS---CCCCEEEEEEEEEECCCSSSTTT
T ss_pred HHHHHHHHHHHHhcCCCEEEcCcEEEEEEecCCeEEEEEEeccccccccCccc---cCceEEEECCEEEECCCCchHHH
Confidence 011112222333446777765 5888887665543 12111 1 110 00123799999999999876543
No 106
>1ryi_A Glycine oxidase; flavoprotein, protein-inhibitor complex, oxidoreductase; HET: FAD; 1.80A {Bacillus subtilis} SCOP: c.3.1.2 d.16.1.3 PDB: 3if9_A* 1ng4_A* 1ng3_A*
Probab=98.95 E-value=4.5e-09 Score=97.05 Aligned_cols=61 Identities=18% Similarity=0.148 Sum_probs=47.4
Q ss_pred cHHHHHHHHHHhhhcCcEEEcCe-EEEEeC--C--eEEecCCcEEeccEEEEecCCCCccccccCCC
Q 018704 283 DDRLRHYATTQLSKSGVRLVRGI-VKDVDS--Q--KLILNDGTEVPYGLLVWSTGVGPSTLVKSLDL 344 (351)
Q Consensus 283 ~~~~~~~~~~~l~~~gV~~~~~~-v~~v~~--~--~v~~~~g~~~~~D~vi~a~G~~p~~~~~~~gl 344 (351)
+..+.+.+.+.+++.|++++.+. |+++.. + .|.+.+| ++.+|.||+|+|.....++..+++
T Consensus 163 ~~~~~~~l~~~~~~~g~~i~~~~~v~~i~~~~~~~~v~~~~g-~~~a~~vV~A~G~~s~~l~~~~~~ 228 (382)
T 1ryi_A 163 PYFVCKAYVKAAKMLGAEIFEHTPVLHVERDGEALFIKTPSG-DVWANHVVVASGVWSGMFFKQLGL 228 (382)
T ss_dssp HHHHHHHHHHHHHHTTCEEETTCCCCEEECSSSSEEEEETTE-EEEEEEEEECCGGGTHHHHHHTTC
T ss_pred HHHHHHHHHHHHHHCCCEEEcCCcEEEEEEECCEEEEEcCCc-eEEcCEEEECCChhHHHHHHhcCC
Confidence 35778888888999999999994 888864 2 3556666 799999999999876666665554
No 107
>3pvc_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; structural genomics, PSI-biology; HET: FAD; 2.31A {Yersinia pestis} PDB: 3sgl_A*
Probab=98.95 E-value=1.5e-08 Score=101.03 Aligned_cols=64 Identities=13% Similarity=0.158 Sum_probs=48.4
Q ss_pred cHHHHHHHHHHhhhcCcEEEcCe-EEEEeC--C--eEEecCCc-EEeccEEEEecCCCCccccccCCCCC
Q 018704 283 DDRLRHYATTQLSKSGVRLVRGI-VKDVDS--Q--KLILNDGT-EVPYGLLVWSTGVGPSTLVKSLDLPK 346 (351)
Q Consensus 283 ~~~~~~~~~~~l~~~gV~~~~~~-v~~v~~--~--~v~~~~g~-~~~~D~vi~a~G~~p~~~~~~~gl~~ 346 (351)
+..+...+.+.+++.|++++.++ |+++.. + .|.+.+|. ++.+|.||+|+|.....++..+++++
T Consensus 411 p~~l~~aL~~~a~~~Gv~i~~~t~V~~l~~~~~~v~V~t~~G~~~i~Ad~VVlAtG~~s~~l~~~~~lpl 480 (689)
T 3pvc_A 411 PSDLTHALMMLAQQNGMTCHYQHELQRLKRIDSQWQLTFGQSQAAKHHATVILATGHRLPEWEQTHHLPL 480 (689)
T ss_dssp HHHHHHHHHHHHHHTTCEEEESCCEEEEEECSSSEEEEEC-CCCCEEESEEEECCGGGTTCSTTTTTSCC
T ss_pred HHHHHHHHHHHHHhCCCEEEeCCeEeEEEEeCCeEEEEeCCCcEEEECCEEEECCCcchhccccccCCcc
Confidence 35777888888899999999995 988864 3 35666776 89999999999988666655555443
No 108
>2gf3_A MSOX, monomeric sarcosine oxidase; flavoprotein oxidase, inhibitor 2-furoic acid, oxidoreductas; HET: FAD; 1.30A {Bacillus SP} SCOP: c.3.1.2 d.16.1.3 PDB: 1el7_A* 1el8_A* 1el9_A* 1eli_A* 1l9e_A* 2a89_A* 2gb0_A* 1el5_A* 3qse_A* 3qsm_A* 3qss_A* 3bhk_A* 3bhf_A* 3m12_A* 3m13_A* 3m0o_A* 1l9c_A* 1l9d_A* 1zov_A*
Probab=98.93 E-value=8.7e-09 Score=95.33 Aligned_cols=74 Identities=19% Similarity=0.217 Sum_probs=53.4
Q ss_pred ccEEEEEeCCC-CCCCCcHHHHHHHHHHhhhcCcEEEcCe-EEEEeC--Ce--EEecCCcEEeccEEEEecCCCCccccc
Q 018704 267 YIHVTLIEANE-ILSSFDDRLRHYATTQLSKSGVRLVRGI-VKDVDS--QK--LILNDGTEVPYGLLVWSTGVGPSTLVK 340 (351)
Q Consensus 267 ~~~v~~~~~~~-~l~~~~~~~~~~~~~~l~~~gV~~~~~~-v~~v~~--~~--v~~~~g~~~~~D~vi~a~G~~p~~~~~ 340 (351)
.....++.+.. .+. +..+...+.+.+++.|++++.++ |++++. ++ +.+.+| ++.+|.||+|+|.+.+.++.
T Consensus 134 ~~~~~~~~~~~~~~~--~~~~~~~l~~~~~~~Gv~i~~~~~v~~i~~~~~~~~v~~~~g-~~~a~~vV~A~G~~~~~l~~ 210 (389)
T 2gf3_A 134 ENYNAIFEPNSGVLF--SENCIRAYRELAEARGAKVLTHTRVEDFDISPDSVKIETANG-SYTADKLIVSMGAWNSKLLS 210 (389)
T ss_dssp TTEEEEEETTCEEEE--HHHHHHHHHHHHHHTTCEEECSCCEEEEEECSSCEEEEETTE-EEEEEEEEECCGGGHHHHGG
T ss_pred CCceEEEeCCCcEEe--HHHHHHHHHHHHHHCCCEEEcCcEEEEEEecCCeEEEEeCCC-EEEeCEEEEecCccHHHHhh
Confidence 45667766642 221 35777888888999999999994 988864 33 444454 79999999999988776666
Q ss_pred cCC
Q 018704 341 SLD 343 (351)
Q Consensus 341 ~~g 343 (351)
.++
T Consensus 211 ~~g 213 (389)
T 2gf3_A 211 KLN 213 (389)
T ss_dssp GGT
T ss_pred hhc
Confidence 554
No 109
>3nyc_A D-arginine dehydrogenase; FAD, imino-arginine, oxidoreductas; HET: FAD IAR; 1.06A {Pseudomonas aeruginosa} PDB: 3nye_A* 3nyf_A* 3sm8_A*
Probab=98.91 E-value=6e-10 Score=102.78 Aligned_cols=60 Identities=10% Similarity=0.108 Sum_probs=45.6
Q ss_pred HHHHHHHHHHhhhcCcEEEcCe-EEEEeC--C--eEEecCCcEEeccEEEEecCCCCccccccCCC
Q 018704 284 DRLRHYATTQLSKSGVRLVRGI-VKDVDS--Q--KLILNDGTEVPYGLLVWSTGVGPSTLVKSLDL 344 (351)
Q Consensus 284 ~~~~~~~~~~l~~~gV~~~~~~-v~~v~~--~--~v~~~~g~~~~~D~vi~a~G~~p~~~~~~~gl 344 (351)
..+...+.+.+++.|++++.++ |+++.. + .|.+.+| ++.||.||+|+|.+...++..+|+
T Consensus 154 ~~~~~~l~~~a~~~Gv~i~~~~~V~~i~~~~~~~~V~t~~g-~i~a~~VV~A~G~~s~~l~~~~g~ 218 (381)
T 3nyc_A 154 DALHQGYLRGIRRNQGQVLCNHEALEIRRVDGAWEVRCDAG-SYRAAVLVNAAGAWCDAIAGLAGV 218 (381)
T ss_dssp HHHHHHHHHHHHHTTCEEESSCCCCEEEEETTEEEEECSSE-EEEESEEEECCGGGHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHCCCEEEcCCEEEEEEEeCCeEEEEeCCC-EEEcCEEEECCChhHHHHHHHhCC
Confidence 5677888888999999999984 887753 3 3555666 799999999999876655554443
No 110
>3pl8_A Pyranose 2-oxidase; substrate complex, H167A mutant, homotetramer, GMC oxidoredu PHBH fold, rossmann domain, oxidoreductase; HET: FAD MES G3F; 1.35A {Trametes ochracea} PDB: 2igo_A* 3lsm_A* 2ign_A* 3k4c_A* 1tt0_A* 2igk_A* 3k4b_A* 3lsk_A* 3bg6_A* 3lsh_A* 3lsi_A* 2igm_A* 3k4j_A* 3k4m_A* 3bg7_A* 3k4k_A* 3k4l_A* 3bly_A* 1tzl_A* 3fdy_A* ...
Probab=98.90 E-value=1.4e-10 Score=114.08 Aligned_cols=38 Identities=26% Similarity=0.314 Sum_probs=34.1
Q ss_pred CCCcEEEECCchhHHHHHHhhhccCceEEEEcCCCccc
Q 018704 61 EKPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRNHMV 98 (351)
Q Consensus 61 ~~~~VvIIG~G~aGl~aA~~L~~~g~~v~vie~~~~~~ 98 (351)
..+||+|||||++|+++|+.|++.|++|+|||+.+...
T Consensus 45 ~~~dvvIIG~G~aGl~aA~~l~~~G~~V~liE~~~~~g 82 (623)
T 3pl8_A 45 IKYDVVIVGSGPIGCTYARELVGAGYKVAMFDIGEIDS 82 (623)
T ss_dssp -CEEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCCS
T ss_pred ccCCEEEECCcHHHHHHHHHHHhCCCcEEEEeccCCCC
Confidence 35799999999999999999999999999999977643
No 111
>1y56_B Sarcosine oxidase; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=98.89 E-value=3.6e-08 Score=91.03 Aligned_cols=60 Identities=15% Similarity=0.108 Sum_probs=45.8
Q ss_pred cHHHHHHHHHHhhhcCcEEEcCe-EEEEeC--Ce---EEecCCcEEeccEEEEecCCCCccccccCC
Q 018704 283 DDRLRHYATTQLSKSGVRLVRGI-VKDVDS--QK---LILNDGTEVPYGLLVWSTGVGPSTLVKSLD 343 (351)
Q Consensus 283 ~~~~~~~~~~~l~~~gV~~~~~~-v~~v~~--~~---v~~~~g~~~~~D~vi~a~G~~p~~~~~~~g 343 (351)
+..+.+.+.+.+++.|++++.+. |+++.. ++ |.+.+| ++.+|.||+|+|.....+...+|
T Consensus 148 ~~~l~~~l~~~~~~~Gv~i~~~~~v~~i~~~~~~v~gv~~~~g-~i~a~~VV~A~G~~s~~l~~~~g 213 (382)
T 1y56_B 148 PFEATTAFAVKAKEYGAKLLEYTEVKGFLIENNEIKGVKTNKG-IIKTGIVVNATNAWANLINAMAG 213 (382)
T ss_dssp HHHHHHHHHHHHHHTTCEEECSCCEEEEEESSSBEEEEEETTE-EEECSEEEECCGGGHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHCCCEEECCceEEEEEEECCEEEEEEECCc-EEECCEEEECcchhHHHHHHHcC
Confidence 35677778888899999999994 988863 32 666666 79999999999988755444433
No 112
>2i0z_A NAD(FAD)-utilizing dehydrogenases; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: FAD; 1.84A {Bacillus cereus} SCOP: c.3.1.8 e.74.1.1
Probab=98.88 E-value=3.8e-09 Score=99.94 Aligned_cols=37 Identities=22% Similarity=0.242 Sum_probs=33.5
Q ss_pred CCCCcEEEECCchhHHHHHHhhhccCceEEEEcCCCc
Q 018704 60 NEKPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRNH 96 (351)
Q Consensus 60 ~~~~~VvIIG~G~aGl~aA~~L~~~g~~v~vie~~~~ 96 (351)
.+.+||+|||||++||++|+.|++.|.+|+|||+.+.
T Consensus 24 ~~~~dVvIIGgG~aGl~aA~~la~~G~~V~llEk~~~ 60 (447)
T 2i0z_A 24 AMHYDVIVIGGGPSGLMAAIGAAEEGANVLLLDKGNK 60 (447)
T ss_dssp -CCCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSS
T ss_pred cCCCCEEEECCcHHHHHHHHHHHHCCCCEEEEECCCC
Confidence 4558999999999999999999999999999998764
No 113
>3ps9_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; rossmann fold, oxidase, methyl transferase, FAD; HET: FAD SAM; 2.54A {Escherichia coli} PDB: 3awi_A*
Probab=98.88 E-value=2e-08 Score=99.95 Aligned_cols=62 Identities=13% Similarity=0.224 Sum_probs=48.0
Q ss_pred HHHHHHHHHHhhhcCcEEEcCe-EEEEeC--C--eEEecCCcEEeccEEEEecCCCCccccccCCCC
Q 018704 284 DRLRHYATTQLSKSGVRLVRGI-VKDVDS--Q--KLILNDGTEVPYGLLVWSTGVGPSTLVKSLDLP 345 (351)
Q Consensus 284 ~~~~~~~~~~l~~~gV~~~~~~-v~~v~~--~--~v~~~~g~~~~~D~vi~a~G~~p~~~~~~~gl~ 345 (351)
..+...+.+.+++.|++++.++ |+++.. + .|.+.+|.++.+|.||+|+|.....+...++++
T Consensus 417 ~~l~~aL~~~a~~~Gv~i~~~t~V~~l~~~~~~v~V~t~~G~~i~Ad~VVlAtG~~s~~l~~~~~lp 483 (676)
T 3ps9_A 417 AELTRNVLELAQQQGLQIYYQYQLQNFSRKDDCWLLNFAGDQQATHSVVVLANGHQISRFSQTSTLP 483 (676)
T ss_dssp HHHHHHHHHHHHHTTCEEEESCCEEEEEEETTEEEEEETTSCEEEESEEEECCGGGGGCSTTTTTCS
T ss_pred HHHHHHHHHHHHhCCCEEEeCCeeeEEEEeCCeEEEEECCCCEEECCEEEECCCcchhccccccCCc
Confidence 5777888888899999999995 888853 3 345567788999999999998866555544444
No 114
>2gag_B Heterotetrameric sarcosine oxidase beta-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_B* 1x31_B* 1vrq_B* 3ad7_B* 3ad8_B* 3ad9_B* 3ada_B*
Probab=98.88 E-value=2.6e-08 Score=92.62 Aligned_cols=60 Identities=13% Similarity=0.188 Sum_probs=46.2
Q ss_pred HHHHHHHHHHhhhcCcEEEcCe-EEEEeC--C---eEEecCCcEEeccEEEEecCCCCccccccCCC
Q 018704 284 DRLRHYATTQLSKSGVRLVRGI-VKDVDS--Q---KLILNDGTEVPYGLLVWSTGVGPSTLVKSLDL 344 (351)
Q Consensus 284 ~~~~~~~~~~l~~~gV~~~~~~-v~~v~~--~---~v~~~~g~~~~~D~vi~a~G~~p~~~~~~~gl 344 (351)
..+.+.+.+.+++.|++++.+. |+++.. + +|.+.+| ++.+|.||+|+|.....+.+.+|+
T Consensus 174 ~~~~~~l~~~~~~~g~~i~~~~~v~~i~~~~~~~~~v~~~~g-~~~a~~vV~a~G~~s~~l~~~~g~ 239 (405)
T 2gag_B 174 DHVAWAFARKANEMGVDIIQNCEVTGFIKDGEKVTGVKTTRG-TIHAGKVALAGAGHSSVLAEMAGF 239 (405)
T ss_dssp HHHHHHHHHHHHHTTCEEECSCCEEEEEESSSBEEEEEETTC-CEEEEEEEECCGGGHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHCCCEEEcCCeEEEEEEeCCEEEEEEeCCc-eEECCEEEECCchhHHHHHHHcCC
Confidence 4677888888999999999984 888863 2 3666677 799999999999877555444443
No 115
>2bry_A NEDD9 interacting protein with calponin homology and LIM domains; transport, coiled coil, cytoskeleton, FAD, flavoprotein, metal-binding, zinc; HET: FAD; 1.45A {Mus musculus} PDB: 2c4c_A* 2bra_A*
Probab=98.87 E-value=1.8e-09 Score=103.52 Aligned_cols=124 Identities=15% Similarity=0.150 Sum_probs=70.8
Q ss_pred CCCCcEEEECCchhHHHHHHhhhccCceEEEEcCCCccccc------hhhhhh--hccc------ccccc---c-ccchh
Q 018704 60 NEKPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRNHMVFT------PLLAST--CVGT------LEFRS---V-AEPIA 121 (351)
Q Consensus 60 ~~~~~VvIIG~G~aGl~aA~~L~~~g~~v~vie~~~~~~~~------~~~~~~--~~~~------~~~~~---~-~~~~~ 121 (351)
...+||+|||||++||++|..|++.|++|+|||+.+..... +..... ..+. ..... + ...+.
T Consensus 90 ~~~~dVvIVGgG~aGl~aA~~La~~G~~V~liEk~~~~g~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~l~ 169 (497)
T 2bry_A 90 CTNTKCLVVGAGPCGLRAAVELALLGARVVLVEKRIKFSRHNVLHLWPFTIHDLRALGAKKFYGRFCTGTLDHISIRQLQ 169 (497)
T ss_dssp TTTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCSSCCCCCEEECCHHHHHHHHTTTHHHHCTTTTCTTCCEEEHHHHH
T ss_pred cCCCCEEEECccHHHHHHHHHHHHCCCeEEEEEeccccCCCCcccCChhHHHHHHHcCCccccccccccccccCCHHHHH
Confidence 35689999999999999999999999999999988654211 100000 0000 00000 0 01111
Q ss_pred ccchhhhcCCCeEEEE-EEeeeEeCC---CCEEEEEee-c-CccccCCCceeEeeccEEEEecCCCcCCCCCCC
Q 018704 122 RIQPAISREPGSYFFL-SHCAGIDTD---NHVVHCETV-T-DELRTLEPWKFKISYDKLVIALGAEASTFGIHG 189 (351)
Q Consensus 122 ~~~~~~~~~~~~~~~~-~~v~~i~~~---~~~v~~~~~-~-~~~~~~~~~~~~~~~d~lviAtG~~p~~p~i~g 189 (351)
..........++.++. .+|+.+..+ ...+.+... . +|+ ..++.+|.||+|+|..+......+
T Consensus 170 ~~L~~~~~~~gv~v~~~~~v~~i~~~~~~~~~~~v~~~~~~~g~------~~~i~ad~VV~A~G~~S~~r~~~~ 237 (497)
T 2bry_A 170 LLLLKVALLLGVEIHWGVKFTGLQPPPRKGSGWRAQLQPNPPAQ------LASYEFDVLISAAGGKFVPEGFTI 237 (497)
T ss_dssp HHHHHHHHHTTCEEEESCEEEEEECCCSTTCCBEEEEESCCCHH------HHTCCBSEEEECCCTTCCCTTCEE
T ss_pred HHHHHHHHhCCCEEEeCCEEEEEEEecCCCCEEEEEEEECCCCC------EEEEEcCEEEECCCCCcccccccc
Confidence 1211222234666554 588888763 233433321 1 341 126899999999999866554433
No 116
>2e5v_A L-aspartate oxidase; archaea, oxidoreductase; HET: FAD; 2.09A {Sulfolobus tokodaii}
Probab=98.85 E-value=5.2e-10 Score=106.61 Aligned_cols=31 Identities=26% Similarity=0.323 Sum_probs=30.1
Q ss_pred cEEEECCchhHHHHHHhhhccCceEEEEcCC
Q 018704 64 RVVVLGSGWAGCRLMKGIDTSLYDVVCVSPR 94 (351)
Q Consensus 64 ~VvIIG~G~aGl~aA~~L~~~g~~v~vie~~ 94 (351)
||+|||||++||++|+.|++.|.+|+|||+.
T Consensus 1 DVvVIG~G~AGl~aA~~la~~G~~V~viek~ 31 (472)
T 2e5v_A 1 MIYIIGSGIAGLSAGVALRRAGKKVTLISKR 31 (472)
T ss_dssp CEEEECCSHHHHHHHHHHHHTTCCEEEECSS
T ss_pred CEEEECCCHHHHHHHHHHHHCCCCEEEEeCC
Confidence 7999999999999999999999999999987
No 117
>3alj_A 2-methyl-3-hydroxypyridine-5-carboxylic acid OXYG; alpha/beta fold, oxidoreductase; HET: FAD; 1.48A {Mesorhizobium loti} PDB: 3alh_A* 3ali_A* 3gmb_A* 3gmc_A* 3alk_A* 3alm_A* 3all_A*
Probab=98.83 E-value=4.9e-09 Score=96.95 Aligned_cols=36 Identities=22% Similarity=0.328 Sum_probs=33.4
Q ss_pred CCcEEEECCchhHHHHHHhhhccCceEEEEcCCCcc
Q 018704 62 KPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRNHM 97 (351)
Q Consensus 62 ~~~VvIIG~G~aGl~aA~~L~~~g~~v~vie~~~~~ 97 (351)
.+||+|||||++|+++|..|++.|++|+|||+.+..
T Consensus 11 ~~dVvIVGaG~aGl~~A~~L~~~G~~v~viE~~~~~ 46 (379)
T 3alj_A 11 TRRAEVAGGGFAGLTAAIALKQNGWDVRLHEKSSEL 46 (379)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSC
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCCEEEEecCCCC
Confidence 479999999999999999999999999999987654
No 118
>3dje_A Fructosyl amine: oxygen oxidoreductase; fructosyl-amino acid, amadoriase, deglycation, fructosamine oxidase; HET: MSE FAD FSA EPE; 1.60A {Aspergillus fumigatus} PDB: 3djd_A*
Probab=98.83 E-value=1.8e-08 Score=94.93 Aligned_cols=57 Identities=16% Similarity=0.160 Sum_probs=46.1
Q ss_pred HHHHHHHHHHhhhcCcEEEcC----eEEEEeC--C---eEEecCCcEEeccEEEEecCCCCccccc
Q 018704 284 DRLRHYATTQLSKSGVRLVRG----IVKDVDS--Q---KLILNDGTEVPYGLLVWSTGVGPSTLVK 340 (351)
Q Consensus 284 ~~~~~~~~~~l~~~gV~~~~~----~v~~v~~--~---~v~~~~g~~~~~D~vi~a~G~~p~~~~~ 340 (351)
..+...+.+.+++.|++++.+ +|+++.. + +|++.+|+++.||.||+|+|.....++.
T Consensus 161 ~~~~~~L~~~a~~~Gv~i~~~t~~~~V~~i~~~~~~v~gV~t~~G~~i~Ad~VV~AtG~~s~~l~~ 226 (438)
T 3dje_A 161 RNALVAAAREAQRMGVKFVTGTPQGRVVTLIFENNDVKGAVTADGKIWRAERTFLCAGASAGQFLD 226 (438)
T ss_dssp HHHHHHHHHHHHHTTCEEEESTTTTCEEEEEEETTEEEEEEETTTEEEECSEEEECCGGGGGGTSC
T ss_pred HHHHHHHHHHHHhcCCEEEeCCcCceEEEEEecCCeEEEEEECCCCEEECCEEEECCCCChhhhcC
Confidence 567788888899999999998 5888753 3 3777888889999999999987665544
No 119
>2bry_A NEDD9 interacting protein with calponin homology and LIM domains; transport, coiled coil, cytoskeleton, FAD, flavoprotein, metal-binding, zinc; HET: FAD; 1.45A {Mus musculus} PDB: 2c4c_A* 2bra_A*
Probab=98.82 E-value=2.1e-09 Score=103.09 Aligned_cols=146 Identities=19% Similarity=0.205 Sum_probs=97.1
Q ss_pred eccEEEEecCCCcCCCCCCCcc-ccccccCCHHHHHHH-HHHHHHhhhccCCCCCCHhhhcccCeEEEECCChHHHHHHH
Q 018704 170 SYDKLVIALGAEASTFGIHGVK-ENATFLREVHHAQEI-RRKLLLNLMLSDVPGISEEEKSRLLHCVVVGGGPTGVEFSG 247 (351)
Q Consensus 170 ~~d~lviAtG~~p~~p~i~g~~-~~~~~~~~~~~~~~~-~~~~~~~~~~~~~p~~~~~~~~~~~~v~VvGgG~~a~e~a~ 247 (351)
.||.+++++|..|+.+++++.+ +..+......+.... ..++. . .|. .........+|+|||||.+|+.+|.
T Consensus 37 ~~~~l~~~~g~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~----~--~~~-~~~~~~~~~dVvIVGgG~aGl~aA~ 109 (497)
T 2bry_A 37 SFQGLCRALGVESGGGLSQYHKIKAQLNYWSAKSLWAKLDKRAS----Q--PVY-QQGQACTNTKCLVVGAGPCGLRAAV 109 (497)
T ss_dssp HHHHHHHHHTCCTTCHHHHHHHHHHTCCSTTTHHHHHHHHHHHT----S--GGG-GGGTTTTTCEEEEECCSHHHHHHHH
T ss_pred HHHHHHHHhCCCCCCCcEeehhhHHHHHHHHHHHhhhhhhhhhc----c--ccc-cCccccCCCCEEEECccHHHHHHHH
Confidence 4678999999998777665543 233344444443333 11111 0 000 0001123459999999999999999
Q ss_pred HHHHHHHHHHHhhhcCCCCccEEEEEeCCCCCCC------Cc----------------------------HHHHHHHHHH
Q 018704 248 ELSDFIMRDVRQRYSHVKDYIHVTLIEANEILSS------FD----------------------------DRLRHYATTQ 293 (351)
Q Consensus 248 ~l~~~~~~~~~~~~~~~~~~~~v~~~~~~~~l~~------~~----------------------------~~~~~~~~~~ 293 (351)
.|++.| .+|+++++...+.. .+ ..+.+.+.+.
T Consensus 110 ~La~~G--------------~~V~liEk~~~~g~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 175 (497)
T 2bry_A 110 ELALLG--------------ARVVLVEKRIKFSRHNVLHLWPFTIHDLRALGAKKFYGRFCTGTLDHISIRQLQLLLLKV 175 (497)
T ss_dssp HHHHTT--------------CEEEEEESCSSCCCCCEEECCHHHHHHHHTTTHHHHCTTTTCTTCCEEEHHHHHHHHHHH
T ss_pred HHHHCC--------------CeEEEEEeccccCCCCcccCChhHHHHHHHcCCccccccccccccccCCHHHHHHHHHHH
Confidence 999877 89999998642210 01 3555667777
Q ss_pred hhhcCcEEEcCe-EEEEeCC-------eEEe--c-CC--cEEeccEEEEecCCCCc
Q 018704 294 LSKSGVRLVRGI-VKDVDSQ-------KLIL--N-DG--TEVPYGLLVWSTGVGPS 336 (351)
Q Consensus 294 l~~~gV~~~~~~-v~~v~~~-------~v~~--~-~g--~~~~~D~vi~a~G~~p~ 336 (351)
+++.||+++.+. |+++..+ .|.+ . +| .++.+|.||.|+|..+.
T Consensus 176 ~~~~gv~v~~~~~v~~i~~~~~~~~~~~v~~~~~~~g~~~~i~ad~VV~A~G~~S~ 231 (497)
T 2bry_A 176 ALLLGVEIHWGVKFTGLQPPPRKGSGWRAQLQPNPPAQLASYEFDVLISAAGGKFV 231 (497)
T ss_dssp HHHTTCEEEESCEEEEEECCCSTTCCBEEEEESCCCHHHHTCCBSEEEECCCTTCC
T ss_pred HHhCCCEEEeCCEEEEEEEecCCCCEEEEEEEECCCCCEEEEEcCEEEECCCCCcc
Confidence 888899999994 9888641 4556 3 56 46899999999998876
No 120
>2cul_A Glucose-inhibited division protein A-related PROT probable oxidoreductase; rossmann fold, protein-FAD complex; HET: FAD; 1.65A {Thermus thermophilus} SCOP: c.3.1.7
Probab=98.81 E-value=2.7e-08 Score=85.47 Aligned_cols=91 Identities=15% Similarity=0.076 Sum_probs=71.8
Q ss_pred eEEEECCChHHHHHHHHHHHHHHHHHHhhhcCCCCccEEEEEeCCC-CC-----------------CC-------CcHHH
Q 018704 232 HCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANE-IL-----------------SS-------FDDRL 286 (351)
Q Consensus 232 ~v~VvGgG~~a~e~a~~l~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~l-----------------~~-------~~~~~ 286 (351)
+|+|||||++|+++|..|++.+ .+|+++++.. .. .. ....+
T Consensus 5 dVvVVGgG~aGl~aA~~la~~g--------------~~v~lie~~~~~~G~~~~~~~~~~~~~~~~~~~~d~~g~~~~~~ 70 (232)
T 2cul_A 5 QVLIVGAGFSGAETAFWLAQKG--------------VRVGLLTQSLDAVMMPFLPPKPPFPPGSLLERAYDPKDERVWAF 70 (232)
T ss_dssp SEEEECCSHHHHHHHHHHHHTT--------------CCEEEEESCGGGTTCCSSCCCSCCCTTCHHHHHCCTTCCCHHHH
T ss_pred CEEEECcCHHHHHHHHHHHHCC--------------CCEEEEecCCCcCCcccCccccccchhhHHhhhccCCCCCHHHH
Confidence 7999999999999999999877 8999999861 00 00 11256
Q ss_pred HHHHHHHhhhc-CcEEEcCeEEEEeC--C---eEEecCCcEEeccEEEEecCCCCc
Q 018704 287 RHYATTQLSKS-GVRLVRGIVKDVDS--Q---KLILNDGTEVPYGLLVWSTGVGPS 336 (351)
Q Consensus 287 ~~~~~~~l~~~-gV~~~~~~v~~v~~--~---~v~~~~g~~~~~D~vi~a~G~~p~ 336 (351)
.+.+.+.+++. |++++..+|+++.. + .+.+.+|.++++|.||+|+|..++
T Consensus 71 ~~~l~~~~~~~~gv~i~~~~v~~i~~~~~~v~~v~~~~g~~i~a~~VV~A~G~~s~ 126 (232)
T 2cul_A 71 HARAKYLLEGLRPLHLFQATATGLLLEGNRVVGVRTWEGPPARGEKVVLAVGSFLG 126 (232)
T ss_dssp HHHHHHHHHTCTTEEEEECCEEEEEEETTEEEEEEETTSCCEECSEEEECCTTCSS
T ss_pred HHHHHHHHHcCCCcEEEEeEEEEEEEeCCEEEEEEECCCCEEECCEEEECCCCChh
Confidence 67778888886 99999656888753 3 467788888999999999999665
No 121
>2uzz_A N-methyl-L-tryptophan oxidase; N-methyltryptophan oxidase (MTOX), oxidative demethylation of N-methyl-L-tryptophan, FAD, flavoenzyme; HET: FAD; 3.2A {Escherichia coli}
Probab=98.80 E-value=1.3e-08 Score=93.50 Aligned_cols=56 Identities=13% Similarity=0.070 Sum_probs=43.3
Q ss_pred HHHHHHHHHHhhhcCcEEEcC-eEEEEeC--C--eEEecCCcEEeccEEEEecCCCCccccc
Q 018704 284 DRLRHYATTQLSKSGVRLVRG-IVKDVDS--Q--KLILNDGTEVPYGLLVWSTGVGPSTLVK 340 (351)
Q Consensus 284 ~~~~~~~~~~l~~~gV~~~~~-~v~~v~~--~--~v~~~~g~~~~~D~vi~a~G~~p~~~~~ 340 (351)
..+...+.+.+++.|++++.+ +|+++.. + .+.+.+| ++.+|.||+|+|.+...++.
T Consensus 149 ~~l~~~l~~~~~~~G~~i~~~~~V~~i~~~~~~~~v~~~~g-~~~a~~vV~a~G~~s~~l~~ 209 (372)
T 2uzz_A 149 ELAIKTWIQLAKEAGCAQLFNCPVTAIRHDDDGVTIETADG-EYQAKKAIVCAGTWVKDLLP 209 (372)
T ss_dssp HHHHHHHHHHHHHTTCEEECSCCEEEEEECSSSEEEEESSC-EEEEEEEEECCGGGGGGTST
T ss_pred HHHHHHHHHHHHHCCCEEEcCCEEEEEEEcCCEEEEEECCC-eEEcCEEEEcCCccHHhhcc
Confidence 467778888888999999999 4988864 3 3555666 59999999999987655544
No 122
>3rp8_A Flavoprotein monooxygenase; FAD-binding protein, oxidoreductase; HET: FAD; 1.97A {Klebsiella pneumoniae} PDB: 3rp7_A* 3rp6_A*
Probab=98.79 E-value=1.1e-08 Score=95.50 Aligned_cols=38 Identities=16% Similarity=0.250 Sum_probs=33.5
Q ss_pred CCCCcEEEECCchhHHHHHHhhhccCceEEEEcCCCcc
Q 018704 60 NEKPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRNHM 97 (351)
Q Consensus 60 ~~~~~VvIIG~G~aGl~aA~~L~~~g~~v~vie~~~~~ 97 (351)
.+++||+|||||++||++|+.|++.|++|+|||+.+..
T Consensus 21 ~~~~dV~IVGaG~aGl~~A~~La~~G~~V~v~E~~~~~ 58 (407)
T 3rp8_A 21 QGHMKAIVIGAGIGGLSAAVALKQSGIDCDVYEAVKEI 58 (407)
T ss_dssp --CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSCC
T ss_pred CCCCEEEEECCCHHHHHHHHHHHhCCCCEEEEeCCCCC
Confidence 45689999999999999999999999999999987643
No 123
>3oz2_A Digeranylgeranylglycerophospholipid reductase; structural genomics, joint center for structural genomics; HET: MSE FAD OZ2; 1.60A {Thermoplasma acidophilum}
Probab=98.79 E-value=2.9e-09 Score=98.44 Aligned_cols=36 Identities=17% Similarity=0.215 Sum_probs=33.4
Q ss_pred CCcEEEECCchhHHHHHHhhhccCceEEEEcCCCcc
Q 018704 62 KPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRNHM 97 (351)
Q Consensus 62 ~~~VvIIG~G~aGl~aA~~L~~~g~~v~vie~~~~~ 97 (351)
++||+|||||||||++|+.|++.|++|+|||+++..
T Consensus 4 ~yDViIVGaGpaGl~~A~~La~~G~~V~v~Er~~~~ 39 (397)
T 3oz2_A 4 TYDVLVVGGGPGGSTAARYAAKYGLKTLMIEKRPEI 39 (397)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSST
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCcEEEEeCCCCC
Confidence 489999999999999999999999999999987653
No 124
>3cgv_A Geranylgeranyl reductase related protein; NP_393992.1, geranylgeranyl bacteriochlorophyll reductase- like FIXC homolog; HET: MSE FAD UNL; 1.60A {Thermoplasma acidophilum dsm 1728} PDB: 3oz2_A*
Probab=98.79 E-value=2.3e-08 Score=92.63 Aligned_cols=35 Identities=17% Similarity=0.197 Sum_probs=33.0
Q ss_pred CCcEEEECCchhHHHHHHhhhccCceEEEEcCCCc
Q 018704 62 KPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRNH 96 (351)
Q Consensus 62 ~~~VvIIG~G~aGl~aA~~L~~~g~~v~vie~~~~ 96 (351)
.+||+|||||++|+++|+.|++.|++|+|||+++.
T Consensus 4 ~~dVvIvG~G~aGl~~A~~La~~G~~V~l~E~~~~ 38 (397)
T 3cgv_A 4 TYDVLVVGGGPGGSTAARYAAKYGLKTLMIEKRPE 38 (397)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSS
T ss_pred cCCEEEECcCHHHHHHHHHHHHCCCCEEEEeCCCC
Confidence 47999999999999999999999999999999875
No 125
>3i3l_A Alkylhalidase CMLS; flavin-dependent halogenase, chloramphenicol biosynthesis, halogenation reaction, structural genomics; HET: FAD; 2.20A {Streptomyces venezuelae}
Probab=98.78 E-value=8.9e-09 Score=100.54 Aligned_cols=35 Identities=20% Similarity=0.213 Sum_probs=32.7
Q ss_pred CCCcEEEECCchhHHHHHHhhhccCceEEEEcCCC
Q 018704 61 EKPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRN 95 (351)
Q Consensus 61 ~~~~VvIIG~G~aGl~aA~~L~~~g~~v~vie~~~ 95 (351)
+.+||+|||||++|+++|..|++.|++|+|||+.+
T Consensus 22 ~~~DVvIVGgG~AGl~aA~~Lar~G~~V~LiEr~~ 56 (591)
T 3i3l_A 22 TRSKVAIIGGGPAGSVAGLTLHKLGHDVTIYERSA 56 (591)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSC
T ss_pred CCCCEEEECcCHHHHHHHHHHHcCCCCEEEEcCCC
Confidence 35899999999999999999999999999999874
No 126
>2xdo_A TETX2 protein; tetracycline degradation, tigecycline, flavin, bacteroides F oxidoreductase; HET: FAD; 2.09A {Bacteroides thetaiotaomicron} PDB: 2y6q_A* 2xyo_A* 2y6r_A* 3p9u_A*
Probab=98.78 E-value=1.9e-08 Score=93.54 Aligned_cols=36 Identities=22% Similarity=0.307 Sum_probs=33.2
Q ss_pred CCCcEEEECCchhHHHHHHhhhccCceEEEEcCCCc
Q 018704 61 EKPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRNH 96 (351)
Q Consensus 61 ~~~~VvIIG~G~aGl~aA~~L~~~g~~v~vie~~~~ 96 (351)
..+||+|||||++||++|..|++.|++|+|||+.+.
T Consensus 25 ~~~dV~IVGaG~aGl~~A~~L~~~G~~v~v~E~~~~ 60 (398)
T 2xdo_A 25 SDKNVAIIGGGPVGLTMAKLLQQNGIDVSVYERDND 60 (398)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHTTTCEEEEEECSSS
T ss_pred CCCCEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCC
Confidence 357999999999999999999999999999998764
No 127
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=98.78 E-value=3.8e-09 Score=92.04 Aligned_cols=36 Identities=14% Similarity=0.213 Sum_probs=33.6
Q ss_pred CCcEEEECCchhHHHHHHhhhccCceEEEEcCCCcc
Q 018704 62 KPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRNHM 97 (351)
Q Consensus 62 ~~~VvIIG~G~aGl~aA~~L~~~g~~v~vie~~~~~ 97 (351)
..||+|||||||||+||+.|++.|++|+|||+.+..
T Consensus 2 t~dV~IIGaGpaGL~aA~~La~~G~~V~v~Ek~~~~ 37 (336)
T 3kkj_A 2 TVPIAIIGTGIAGLSAAQALTAAGHQVHLFDKSRGS 37 (336)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSS
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCCCC
Confidence 479999999999999999999999999999998754
No 128
>1yvv_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae} PDB: 3kkj_A*
Probab=98.77 E-value=1.3e-08 Score=92.08 Aligned_cols=35 Identities=14% Similarity=0.232 Sum_probs=32.6
Q ss_pred CCcEEEECCchhHHHHHHhhhccCceEEEEcCCCc
Q 018704 62 KPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRNH 96 (351)
Q Consensus 62 ~~~VvIIG~G~aGl~aA~~L~~~g~~v~vie~~~~ 96 (351)
++||+|||||++|+++|+.|++.|++|+|||+.+.
T Consensus 2 ~~dV~IIGaG~~Gl~~A~~L~~~G~~V~vlE~~~~ 36 (336)
T 1yvv_A 2 TVPIAIIGTGIAGLSAAQALTAAGHQVHLFDKSRG 36 (336)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTCCEEEECSSSS
T ss_pred CceEEEECCcHHHHHHHHHHHHCCCcEEEEECCCC
Confidence 47999999999999999999999999999998754
No 129
>2x3n_A Probable FAD-dependent monooxygenase; oxidoreductase; HET: FAD; 1.75A {Pseudomonas aeruginosa}
Probab=98.74 E-value=1.4e-08 Score=94.54 Aligned_cols=36 Identities=22% Similarity=0.203 Sum_probs=33.1
Q ss_pred CCcEEEECCchhHHHHHHhhhccCceEEEEcCCCcc
Q 018704 62 KPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRNHM 97 (351)
Q Consensus 62 ~~~VvIIG~G~aGl~aA~~L~~~g~~v~vie~~~~~ 97 (351)
++||+|||||++|+++|..|++.|++|+|||+.+..
T Consensus 6 ~~dVvIVGaG~aGl~~A~~L~~~G~~V~viE~~~~~ 41 (399)
T 2x3n_A 6 HIDVLINGCGIGGAMLAYLLGRQGHRVVVVEQARRE 41 (399)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSCCC
T ss_pred cCCEEEECcCHHHHHHHHHHHhCCCcEEEEeCCCCC
Confidence 479999999999999999999999999999987543
No 130
>2vou_A 2,6-dihydroxypyridine hydroxylase; oxidoreductase, aromatic hydroxylase, nicotine degradation, mono-oxygenase; HET: FAD; 2.6A {Arthrobacter nicotinovorans} SCOP: c.3.1.2 d.16.1.2
Probab=98.73 E-value=2.4e-08 Score=92.83 Aligned_cols=36 Identities=17% Similarity=0.170 Sum_probs=33.3
Q ss_pred CCCcEEEECCchhHHHHHHhhhccCceEEEEcCCCc
Q 018704 61 EKPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRNH 96 (351)
Q Consensus 61 ~~~~VvIIG~G~aGl~aA~~L~~~g~~v~vie~~~~ 96 (351)
.++||+|||||++||++|..|++.|++|+|||+.+.
T Consensus 4 ~~~~V~IVGaG~aGl~~A~~L~~~G~~v~v~E~~~~ 39 (397)
T 2vou_A 4 TTDRIAVVGGSISGLTAALMLRDAGVDVDVYERSPQ 39 (397)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred CCCcEEEECCCHHHHHHHHHHHhCCCCEEEEecCCC
Confidence 357999999999999999999999999999998765
No 131
>3qj4_A Renalase; FAD/NAD(P)-binding rossmann fold superfamily, flavin contain oxidoreductase, monoamine oxidase, NAD, extracellular, oxidoreductase; HET: FAD; 2.50A {Homo sapiens}
Probab=98.72 E-value=1.3e-08 Score=92.65 Aligned_cols=34 Identities=12% Similarity=0.218 Sum_probs=31.8
Q ss_pred CcEEEECCchhHHHHHHhhhc---cCceEEEEcCCCc
Q 018704 63 PRVVVLGSGWAGCRLMKGIDT---SLYDVVCVSPRNH 96 (351)
Q Consensus 63 ~~VvIIG~G~aGl~aA~~L~~---~g~~v~vie~~~~ 96 (351)
+||+|||||++||++|+.|++ .|++|+|||+...
T Consensus 2 ~dV~IIGaG~aGl~~A~~L~~~~~~G~~V~v~Ek~~~ 38 (342)
T 3qj4_A 2 AQVLIVGAGMTGSLCAALLRRQTSGPLYLAVWDKADD 38 (342)
T ss_dssp EEEEEECCSHHHHHHHHHHHSCC-CCEEEEEECSSSS
T ss_pred CcEEEECCcHHHHHHHHHHHhhccCCceEEEEECCCC
Confidence 589999999999999999999 9999999998754
No 132
>3nix_A Flavoprotein/dehydrogenase; structural genomics, PSI-2, NES protein structure initiative, northeast structural genomics consortium; HET: FAD; 2.60A {Cytophaga hutchinsonii}
Probab=98.71 E-value=8.8e-09 Score=96.43 Aligned_cols=34 Identities=29% Similarity=0.362 Sum_probs=32.3
Q ss_pred CCcEEEECCchhHHHHHHhhhccCceEEEEcCCC
Q 018704 62 KPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRN 95 (351)
Q Consensus 62 ~~~VvIIG~G~aGl~aA~~L~~~g~~v~vie~~~ 95 (351)
.+||+|||||++|+++|+.|++.|++|+|+|+.+
T Consensus 5 ~~dVvIIGgG~aGl~~A~~La~~G~~V~v~E~~~ 38 (421)
T 3nix_A 5 KVDVLVIGAGPAGTVAASLVNKSGFKVKIVEKQK 38 (421)
T ss_dssp EEEEEEECCSHHHHHHHHHHHTTTCCEEEECSSC
T ss_pred cCcEEEECCCHHHHHHHHHHHhCCCCEEEEeCCC
Confidence 4799999999999999999999999999999875
No 133
>3hyw_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3hyv_A* 3hyx_A*
Probab=98.66 E-value=2.2e-08 Score=94.23 Aligned_cols=94 Identities=22% Similarity=0.408 Sum_probs=71.2
Q ss_pred CeEEEECCChHHHHHHHHHHHHHHHHHHhhhcCCCCccEEEEEeCCCC---CCCCc---------HHHHHHHHHHhhhcC
Q 018704 231 LHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEI---LSSFD---------DRLRHYATTQLSKSG 298 (351)
Q Consensus 231 ~~v~VvGgG~~a~e~a~~l~~~~~~~~~~~~~~~~~~~~v~~~~~~~~---l~~~~---------~~~~~~~~~~l~~~g 298 (351)
|+|+|||||+.|+.+|..|.+.+ ++.+|+++++++. .|.+. .++...+.+.+++.|
T Consensus 3 K~VvIIGgG~aGl~aA~~L~~~~------------~~~~VtlI~~~~~~~~~p~l~~v~~g~~~~~~i~~~~~~~~~~~g 70 (430)
T 3hyw_A 3 KHVVVIGGGVGGIATAYNLRNLM------------PDLKITLISDRPYFGFTPAFPHLAMGWRKFEDISVPLAPLLPKFN 70 (430)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHC------------TTCEEEEECSSSEEECGGGHHHHHHTCSCGGGSEEESTTTGGGGT
T ss_pred CcEEEECCCHHHHHHHHHHhccC------------cCCeEEEEcCCCCCccCccHHHHhcCCCCHHHhhhcHHHHHHHCC
Confidence 58999999999999999997754 2379999999752 12111 111111234466779
Q ss_pred cEEEcCeEEEEeC--CeEEecCCcEEeccEEEEecCCCCc
Q 018704 299 VRLVRGIVKDVDS--QKLILNDGTEVPYGLLVWSTGVGPS 336 (351)
Q Consensus 299 V~~~~~~v~~v~~--~~v~~~~g~~~~~D~vi~a~G~~p~ 336 (351)
|+++.++|++++. ..|++++|+++++|.+|+|||.++.
T Consensus 71 v~~i~~~v~~Id~~~~~V~~~~g~~i~YD~LViAtG~~~~ 110 (430)
T 3hyw_A 71 IEFINEKAESIDPDANTVTTQSGKKIEYDYLVIATGPKLV 110 (430)
T ss_dssp EEEECSCEEEEETTTTEEEETTCCEEECSEEEECCCCEEE
T ss_pred cEEEEeEEEEEECCCCEEEECCCCEEECCEEEEeCCCCcc
Confidence 9999999999975 5899999999999999999997654
No 134
>1pj5_A N,N-dimethylglycine oxidase; channelling, FAD binding, folate binding, amine oxidase, oxidoreductase; HET: FAD; 1.61A {Arthrobacter globiformis} SCOP: b.44.2.1 c.3.1.2 d.16.1.5 d.250.1.1 PDB: 1pj6_A* 1pj7_A* 3gsi_A*
Probab=98.66 E-value=2.2e-07 Score=94.56 Aligned_cols=61 Identities=15% Similarity=0.239 Sum_probs=46.8
Q ss_pred cHHHHHHHHHHhhhcCcEEEcCe-EEEEeC--C---eEEecCCcEEeccEEEEecCCCCccccccCCC
Q 018704 283 DDRLRHYATTQLSKSGVRLVRGI-VKDVDS--Q---KLILNDGTEVPYGLLVWSTGVGPSTLVKSLDL 344 (351)
Q Consensus 283 ~~~~~~~~~~~l~~~gV~~~~~~-v~~v~~--~---~v~~~~g~~~~~D~vi~a~G~~p~~~~~~~gl 344 (351)
+..+...+.+.+++.|++++.++ |+++.. + +|.+.+| ++.||.||+|+|.+...+.+.+|+
T Consensus 150 p~~l~~~L~~~a~~~Gv~i~~~t~V~~i~~~~~~v~~V~t~~G-~i~Ad~VV~AaG~~s~~l~~~~g~ 216 (830)
T 1pj5_A 150 AARAVQLLIKRTESAGVTYRGSTTVTGIEQSGGRVTGVQTADG-VIPADIVVSCAGFWGAKIGAMIGM 216 (830)
T ss_dssp HHHHHHHHHHHHHHTTCEEECSCCEEEEEEETTEEEEEEETTE-EEECSEEEECCGGGHHHHHHTTTC
T ss_pred HHHHHHHHHHHHHHcCCEEECCceEEEEEEeCCEEEEEEECCc-EEECCEEEECCccchHHHHHHhCC
Confidence 35777888889999999999994 888863 3 3556666 799999999999887655554443
No 135
>3vrd_B FCCB subunit, flavocytochrome C flavin subunit; sulfide oxidation, heme C binding, FAD binding, electron TRA oxidoreductase complex; HET: HEC FAD; 1.50A {Thermochromatium tepidum} PDB: 1fcd_A*
Probab=98.65 E-value=4.7e-08 Score=90.97 Aligned_cols=95 Identities=25% Similarity=0.307 Sum_probs=71.1
Q ss_pred cCeEEEECCChHHHHHHHHHHHHHHHHHHhhhcCCCCccEEEEEeCCCC--CCCCcHHHH---------HHHHHHhhhcC
Q 018704 230 LLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEI--LSSFDDRLR---------HYATTQLSKSG 298 (351)
Q Consensus 230 ~~~v~VvGgG~~a~e~a~~l~~~~~~~~~~~~~~~~~~~~v~~~~~~~~--l~~~~~~~~---------~~~~~~l~~~g 298 (351)
+|||+|||||+.|+.+|..|.+.+ .+.+|+++++++. .......+. ..-.+.+...|
T Consensus 2 GKkVvIIG~G~AG~~aA~~L~~~~------------~~~~Vtlie~~~~~~~~p~~~~v~~g~~~~~~~~~~~~~~~~~g 69 (401)
T 3vrd_B 2 GRKVVVVGGGTGGATAAKYIKLAD------------PSIEVTLIEPNETYYTCYMSNEVIGGDRELASLRVGYDGLRAHG 69 (401)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHC------------TTSEEEEECSCSSEECSTTHHHHHHTSSCGGGGEECSHHHHHTT
T ss_pred cCEEEEECCcHHHHHHHHHHHhcC------------cCCeEEEEeCCCCCCCccCHHHHhcCCCCHHHHhhCHHHHHHCC
Confidence 479999999999999999987654 2379999998742 111111110 00113455679
Q ss_pred cEEEcCeEEEEeC--CeEEecCCcEEeccEEEEecCCCCc
Q 018704 299 VRLVRGIVKDVDS--QKLILNDGTEVPYGLLVWSTGVGPS 336 (351)
Q Consensus 299 V~~~~~~v~~v~~--~~v~~~~g~~~~~D~vi~a~G~~p~ 336 (351)
|+++.++|++++. ..+.+.+|+++++|.+|+|+|.+++
T Consensus 70 v~~i~~~v~~id~~~~~v~~~~g~~i~yd~LviAtG~~~~ 109 (401)
T 3vrd_B 70 IQVVHDSALGIDPDKKLVKTAGGAEFAYDRCVVAPGIDLL 109 (401)
T ss_dssp CEEECSCEEEEETTTTEEEETTSCEEECSEEEECCCEEEC
T ss_pred CEEEEeEEEEEEccCcEEEecccceeecceeeeccCCccc
Confidence 9999999999976 4788999999999999999998876
No 136
>3fmw_A Oxygenase; mithramycin, baeyer-villiger, flavin binding protein, oxidoreductase; HET: FAD; 2.89A {Streptomyces argillaceus}
Probab=98.65 E-value=3.1e-08 Score=96.41 Aligned_cols=36 Identities=19% Similarity=0.187 Sum_probs=31.4
Q ss_pred CCCcEEEECCchhHHHHHHhhhccCceEEEEcCCCc
Q 018704 61 EKPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRNH 96 (351)
Q Consensus 61 ~~~~VvIIG~G~aGl~aA~~L~~~g~~v~vie~~~~ 96 (351)
+.+||+|||||++||++|..|++.|++|+|||+.+.
T Consensus 48 ~~~DVvIVGaG~aGL~~A~~La~~G~~V~VlEr~~~ 83 (570)
T 3fmw_A 48 LTTDVVVVGGGPVGLMLAGELRAGGVGALVLEKLVE 83 (570)
T ss_dssp ---CEEEECCSHHHHHHHHHHHHTTCCEEEEBSCSS
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCCEEEEcCCCC
Confidence 458999999999999999999999999999998754
No 137
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=98.64 E-value=1.3e-07 Score=83.89 Aligned_cols=91 Identities=20% Similarity=0.319 Sum_probs=72.9
Q ss_pred eEEEECCChHHHHHHHHHHHHHHHHHHhhhcCCCCccEEEEEeCCCC----------CCC----CcHHHHHHHHHHhhhc
Q 018704 232 HCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEI----------LSS----FDDRLRHYATTQLSKS 297 (351)
Q Consensus 232 ~v~VvGgG~~a~e~a~~l~~~~~~~~~~~~~~~~~~~~v~~~~~~~~----------l~~----~~~~~~~~~~~~l~~~ 297 (351)
+|+|||||+.|+.+|..|.+.+ .+|+++++... .+. ...++...+.+.+++.
T Consensus 4 ~vvIIG~G~aGl~aA~~l~~~g--------------~~v~lie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 69 (297)
T 3fbs_A 4 DVIIIGGSYAGLSAALQLGRAR--------------KNILLVDAGERRNRFASHSHGFLGQDGKAPGEIIAEARRQIERY 69 (297)
T ss_dssp EEEEECCSHHHHHHHHHHHHTT--------------CCEEEEECCCCGGGGCSCCCSSTTCTTCCHHHHHHHHHHHHTTC
T ss_pred CEEEECCCHHHHHHHHHHHhCC--------------CCEEEEeCCCcccccchhhcCCcCCCCCCHHHHHHHHHHHHHhc
Confidence 8999999999999999999876 89999997421 111 1246667777777776
Q ss_pred -CcEEEcCeEEEEeCC----eEEecCCcEEeccEEEEecCCCCc
Q 018704 298 -GVRLVRGIVKDVDSQ----KLILNDGTEVPYGLLVWSTGVGPS 336 (351)
Q Consensus 298 -gV~~~~~~v~~v~~~----~v~~~~g~~~~~D~vi~a~G~~p~ 336 (351)
+++++.++|++++.+ .+.+.+|+++.+|.||+|+|..|.
T Consensus 70 ~~v~~~~~~v~~i~~~~~~~~v~~~~g~~~~~d~vviAtG~~~~ 113 (297)
T 3fbs_A 70 PTIHWVEGRVTDAKGSFGEFIVEIDGGRRETAGRLILAMGVTDE 113 (297)
T ss_dssp TTEEEEESCEEEEEEETTEEEEEETTSCEEEEEEEEECCCCEEE
T ss_pred CCeEEEEeEEEEEEEcCCeEEEEECCCCEEEcCEEEECCCCCCC
Confidence 899988888888653 677788889999999999999876
No 138
>3ihg_A RDME; flavoenzyme, anthracycline, polyketide biosynthesis, merohedral twinning, enzyme mechanism, hydroxylase, flavoprotein; HET: FAD VAK; 2.49A {Streptomyces purpurascens}
Probab=98.64 E-value=5.7e-08 Score=94.01 Aligned_cols=36 Identities=22% Similarity=0.254 Sum_probs=33.2
Q ss_pred CCCcEEEECCchhHHHHHHhhhccCceEEEEcCCCc
Q 018704 61 EKPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRNH 96 (351)
Q Consensus 61 ~~~~VvIIG~G~aGl~aA~~L~~~g~~v~vie~~~~ 96 (351)
..+||+|||||++||++|+.|++.|++|+|||+.+.
T Consensus 4 ~~~dVlIVGaG~aGl~~A~~La~~G~~v~viEr~~~ 39 (535)
T 3ihg_A 4 HEVDVLVVGAGLGGLSTAMFLARQGVRVLVVERRPG 39 (535)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHTTTCCEEEECSSSS
T ss_pred ccCcEEEECcCHHHHHHHHHHHHCCCCEEEEeCCCC
Confidence 457999999999999999999999999999998754
No 139
>1y0p_A Fumarate reductase flavoprotein subunit; flavocytochrome, mesaconate, oxidoreductase; HET: HEM FAD; 1.50A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1qjd_A* 2b7s_A* 1jry_A* 2b7r_A* 1ksu_A* 1jrz_A* 1jrx_A* 1m64_A* 1p2h_A* 1p2e_A* 1kss_A* 1e39_A* 1q9i_A* 1lj1_A*
Probab=98.64 E-value=7.6e-08 Score=93.86 Aligned_cols=37 Identities=27% Similarity=0.285 Sum_probs=33.9
Q ss_pred CCCcEEEECCchhHHHHHHhhhccCceEEEEcCCCcc
Q 018704 61 EKPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRNHM 97 (351)
Q Consensus 61 ~~~~VvIIG~G~aGl~aA~~L~~~g~~v~vie~~~~~ 97 (351)
..+||||||||++||++|+.|++.|.+|+|||+.+..
T Consensus 125 ~~~DVvVVGaG~aGl~aA~~la~~G~~V~vlEk~~~~ 161 (571)
T 1y0p_A 125 DTVDVVVVGSGGAGFSAAISATDSGAKVILIEKEPVI 161 (571)
T ss_dssp EECSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSS
T ss_pred CCCCEEEECCCHHHHHHHHHHHHCCCcEEEEeCCCCC
Confidence 3589999999999999999999999999999987654
No 140
>3sx6_A Sulfide-quinone reductase, putative; sulfide:quinone oxidoreductase, Cys356Ala variant, integral membrane protein; HET: FAD LMT DCQ; 1.80A {Acidithiobacillus ferrooxidans} PDB: 3t0k_A* 3szc_A* 3sz0_A* 3t2z_A* 3t31_A* 3sy4_A* 3syi_A* 3sxi_A* 3t14_A* 3t2k_A* 3szw_A* 3szf_A* 3kpg_A* 3kpi_A* 3t2y_A* 3kpk_A*
Probab=98.63 E-value=6.2e-08 Score=91.32 Aligned_cols=95 Identities=26% Similarity=0.438 Sum_probs=73.4
Q ss_pred CeEEEECCChHHHHHHHHHHHHHHHHHHhhhcCCCCccEEEEEeCCCCC---CCC---------cHHHHHHHHHHhhhcC
Q 018704 231 LHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEIL---SSF---------DDRLRHYATTQLSKSG 298 (351)
Q Consensus 231 ~~v~VvGgG~~a~e~a~~l~~~~~~~~~~~~~~~~~~~~v~~~~~~~~l---~~~---------~~~~~~~~~~~l~~~g 298 (351)
++|+|||||..|+.+|..|.+.. ..+.+|+++++++.. +.+ ..++...+.+.+++.|
T Consensus 5 ~~vvIIGgG~aGl~aA~~L~~~~-----------~~g~~Vtlie~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~g 73 (437)
T 3sx6_A 5 AHVVILGAGTGGMPAAYEMKEAL-----------GSGHEVTLISANDYFQFVPSNPWVGVGWKERDDIAFPIRHYVERKG 73 (437)
T ss_dssp CEEEEECCSTTHHHHHHHHHHHH-----------GGGSEEEEECSSSEEECGGGHHHHHHTSSCHHHHEEECHHHHHTTT
T ss_pred CcEEEECCcHHHHHHHHHHhccC-----------CCcCEEEEEeCCCCCcccCCccccccCccCHHHHHHHHHHHHHHCC
Confidence 58999999999999999998722 123899999997522 111 1222233455677789
Q ss_pred cEEEcCeEEEEeC--CeEEecCCcEEeccEEEEecCCCCc
Q 018704 299 VRLVRGIVKDVDS--QKLILNDGTEVPYGLLVWSTGVGPS 336 (351)
Q Consensus 299 V~~~~~~v~~v~~--~~v~~~~g~~~~~D~vi~a~G~~p~ 336 (351)
|+++.++|++++. ..|.+.+|+++.+|.||+|+|.+|+
T Consensus 74 v~~~~~~v~~id~~~~~V~~~~g~~i~~d~lviAtG~~~~ 113 (437)
T 3sx6_A 74 IHFIAQSAEQIDAEAQNITLADGNTVHYDYLMIATGPKLA 113 (437)
T ss_dssp CEEECSCEEEEETTTTEEEETTSCEEECSEEEECCCCEEC
T ss_pred CEEEEeEEEEEEcCCCEEEECCCCEEECCEEEECCCCCcC
Confidence 9999888999876 4788999989999999999999887
No 141
>3da1_A Glycerol-3-phosphate dehydrogenase; NESG BHR167 Q9KDW6 X-RAY, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.70A {Bacillus halodurans}
Probab=98.62 E-value=7.4e-08 Score=93.65 Aligned_cols=61 Identities=15% Similarity=0.048 Sum_probs=45.6
Q ss_pred HHHHHHHHHHhhhcCcEEEcCe-EEEEeC--C---eEEecC---C--cEEeccEEEEecCCCCccccccCCC
Q 018704 284 DRLRHYATTQLSKSGVRLVRGI-VKDVDS--Q---KLILND---G--TEVPYGLLVWSTGVGPSTLVKSLDL 344 (351)
Q Consensus 284 ~~~~~~~~~~l~~~gV~~~~~~-v~~v~~--~---~v~~~~---g--~~~~~D~vi~a~G~~p~~~~~~~gl 344 (351)
..+...+.+.+++.|++++.+. |+++.. + +|.+.+ | .++.||.||.|+|.+...+.+.+|.
T Consensus 170 ~~l~~~L~~~a~~~G~~i~~~~~V~~l~~~~g~v~gV~~~d~~tg~~~~i~A~~VV~AaG~~s~~l~~~~g~ 241 (561)
T 3da1_A 170 ARLTLEIMKEAVARGAVALNYMKVESFIYDQGKVVGVVAKDRLTDTTHTIYAKKVVNAAGPWVDTLREKDRS 241 (561)
T ss_dssp HHHHHHHHHHHHHTTCEEEESEEEEEEEEETTEEEEEEEEETTTCCEEEEEEEEEEECCGGGHHHHHHTTTC
T ss_pred HHHHHHHHHHHHHcCCEEEcCCEEEEEEEcCCeEEEEEEEEcCCCceEEEECCEEEECCCcchHHHHHhcCC
Confidence 5677778888889999999994 888753 3 355543 3 4689999999999877655555554
No 142
>1k0i_A P-hydroxybenzoate hydroxylase; PHBH, FAD, P-OHB, hydrolase; HET: FAD PHB; 1.80A {Pseudomonas aeruginosa} SCOP: c.3.1.2 d.16.1.2 PDB: 1k0j_A* 1k0l_A* 1doc_A* 1d7l_A* 1dod_A* 1doe_A* 1ius_A* 1iut_A* 1iuu_A* 1iuv_A* 1iuw_A* 1iux_A* 1pxb_A* 1pxc_A* 1dob_A* 1ykj_A* 1pxa_A* 1pbe_A* 1pdh_A* 1phh_A* ...
Probab=98.61 E-value=7.4e-08 Score=89.36 Aligned_cols=35 Identities=23% Similarity=0.299 Sum_probs=32.7
Q ss_pred CCcEEEECCchhHHHHHHhhhccCceEEEEcCCCc
Q 018704 62 KPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRNH 96 (351)
Q Consensus 62 ~~~VvIIG~G~aGl~aA~~L~~~g~~v~vie~~~~ 96 (351)
++||+|||||++||++|..|++.|++|+|||+.+.
T Consensus 2 ~~dV~IvGaG~aGl~~A~~L~~~G~~v~v~E~~~~ 36 (394)
T 1k0i_A 2 KTQVAIIGAGPSGLLLGQLLHKAGIDNVILERQTP 36 (394)
T ss_dssp BCSEEEECCSHHHHHHHHHHHHHTCCEEEECSSCH
T ss_pred CccEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCC
Confidence 47999999999999999999999999999998764
No 143
>3atr_A Conserved archaeal protein; saturating double bonds, archaeal membrane precursor, like 2 geranylgeranylglyceryl phosphate; HET: FDA; 1.80A {Sulfolobus acidocaldarius} PDB: 3atq_A*
Probab=98.61 E-value=4.8e-08 Score=92.49 Aligned_cols=35 Identities=20% Similarity=0.379 Sum_probs=32.9
Q ss_pred CCcEEEECCchhHHHHHHhhhccCceEEEEcCCCc
Q 018704 62 KPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRNH 96 (351)
Q Consensus 62 ~~~VvIIG~G~aGl~aA~~L~~~g~~v~vie~~~~ 96 (351)
.+||+|||||++|+++|..|++.|++|+|||+.+.
T Consensus 6 ~~dVvIVGaG~aGl~aA~~La~~G~~V~vlE~~~~ 40 (453)
T 3atr_A 6 KYDVLIIGGGFAGSSAAYQLSRRGLKILLVDSKPW 40 (453)
T ss_dssp ECSEEEECCSHHHHHHHHHHSSSSCCEEEECSSCG
T ss_pred cCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCCC
Confidence 47999999999999999999999999999998765
No 144
>3jsk_A Cypbp37 protein; octameric thiazole synthase, biosynthetic protein; HET: AHZ; 2.70A {Neurospora crassa}
Probab=98.60 E-value=2.2e-07 Score=83.89 Aligned_cols=36 Identities=17% Similarity=0.191 Sum_probs=33.0
Q ss_pred CCcEEEECCchhHHHHHHhhhcc--CceEEEEcCCCcc
Q 018704 62 KPRVVVLGSGWAGCRLMKGIDTS--LYDVVCVSPRNHM 97 (351)
Q Consensus 62 ~~~VvIIG~G~aGl~aA~~L~~~--g~~v~vie~~~~~ 97 (351)
.+||+|||||++||++|+.|++. |++|+|||+....
T Consensus 79 ~~DVvIVGgG~AGL~aA~~La~~~~G~~V~LiEk~~~~ 116 (344)
T 3jsk_A 79 ETDIVIVGAGSCGLSAAYVLSTLRPDLRITIVEAGVAP 116 (344)
T ss_dssp BCSEEEECCSHHHHHHHHHHHHHCTTSCEEEEESSSSC
T ss_pred cCCEEEECccHHHHHHHHHHHhcCCCCEEEEEeCCCcc
Confidence 58999999999999999999997 9999999987654
No 145
>3klj_A NAD(FAD)-dependent dehydrogenase, NIRB-family (N- domain); FAD-binding protein, GR-fold, oxidoreductase; HET: FAD; 2.10A {Clostridium acetobutylicum}
Probab=98.58 E-value=2.3e-07 Score=85.88 Aligned_cols=91 Identities=18% Similarity=0.395 Sum_probs=70.6
Q ss_pred eEEEECCChHHHHHHHHHHHHHHHHHHhhhcCCCCccEEEEEeCCCCCCCCcHHHHHH-------------HHHHhhhcC
Q 018704 232 HCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEILSSFDDRLRHY-------------ATTQLSKSG 298 (351)
Q Consensus 232 ~v~VvGgG~~a~e~a~~l~~~~~~~~~~~~~~~~~~~~v~~~~~~~~l~~~~~~~~~~-------------~~~~l~~~g 298 (351)
+|+|||||..|+.+|..|... +.+|+++++.+.++-..+.+... ..+.+++.|
T Consensus 11 ~~vIvGgG~AGl~aA~~L~~~--------------~~~itlie~~~~~~y~~~~l~~~l~g~~~~~~l~~~~~~~~~~~~ 76 (385)
T 3klj_A 11 KILILGAGPAGFSAAKAALGK--------------CDDITMINSEKYLPYYRPRLNEIIAKNKSIDDILIKKNDWYEKNN 76 (385)
T ss_dssp SEEEECCSHHHHHHHHHHTTT--------------CSCEEEECSSSSCCBCGGGHHHHHHSCCCGGGTBSSCHHHHHHTT
T ss_pred CEEEEcCcHHHHHHHHHHhCC--------------CCEEEEEECCCCCCcccChhhHHHcCCCCHHHccCCCHHHHHHCC
Confidence 899999999999999999433 38999999975433211222221 234456789
Q ss_pred cEEEcC-eEEEEeC--CeEEecCCcEEeccEEEEecCCCCc
Q 018704 299 VRLVRG-IVKDVDS--QKLILNDGTEVPYGLLVWSTGVGPS 336 (351)
Q Consensus 299 V~~~~~-~v~~v~~--~~v~~~~g~~~~~D~vi~a~G~~p~ 336 (351)
|+++.+ +|++++. ..|.+.+|+++.+|.||+|||.+|.
T Consensus 77 i~~~~~~~V~~id~~~~~v~~~~g~~~~yd~lvlAtG~~p~ 117 (385)
T 3klj_A 77 IKVITSEFATSIDPNNKLVTLKSGEKIKYEKLIIASGSIAN 117 (385)
T ss_dssp CEEECSCCEEEEETTTTEEEETTSCEEECSEEEECCCEEEC
T ss_pred CEEEeCCEEEEEECCCCEEEECCCCEEECCEEEEecCCCcC
Confidence 999999 5999875 5789999999999999999998877
No 146
>1qo8_A Flavocytochrome C3 fumarate reductase; oxidoreductase; HET: HEM FAD; 2.15A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1
Probab=98.56 E-value=1.2e-07 Score=92.32 Aligned_cols=38 Identities=24% Similarity=0.297 Sum_probs=34.2
Q ss_pred CCCCcEEEECCchhHHHHHHhhhccCceEEEEcCCCcc
Q 018704 60 NEKPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRNHM 97 (351)
Q Consensus 60 ~~~~~VvIIG~G~aGl~aA~~L~~~g~~v~vie~~~~~ 97 (351)
...+||||||||++||++|+.|++.|.+|+|||+.+..
T Consensus 119 ~~~~DVvVVG~G~aGl~aA~~la~~G~~V~vlEk~~~~ 156 (566)
T 1qo8_A 119 SETTQVLVVGAGSAGFNASLAAKKAGANVILVDKAPFS 156 (566)
T ss_dssp SEEEEEEEECCSHHHHHHHHHHHHHTCCEEEECSSSSS
T ss_pred CCCCCEEEECCCHHHHHHHHHHHHCCCcEEEEeCCCCC
Confidence 34579999999999999999999999999999987643
No 147
>4at0_A 3-ketosteroid-delta4-5alpha-dehydrogenase; oxidoreductase, dehydogenase, steroid catabolism; HET: FAD; 1.60A {Rhodococcus jostii} PDB: 4at2_A*
Probab=98.56 E-value=2.3e-07 Score=89.21 Aligned_cols=37 Identities=24% Similarity=0.204 Sum_probs=33.8
Q ss_pred CCCcEEEECCchhHHHHHHhhhccCceEEEEcCCCcc
Q 018704 61 EKPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRNHM 97 (351)
Q Consensus 61 ~~~~VvIIG~G~aGl~aA~~L~~~g~~v~vie~~~~~ 97 (351)
..+||||||||++||+||+.|++.|.+|+|||+.+..
T Consensus 40 ~~~DVvVVGaG~AGl~AA~~aa~~G~~V~vlEk~~~~ 76 (510)
T 4at0_A 40 YEADVVVAGYGIAGVAASIEAARAGADVLVLERTSGW 76 (510)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSS
T ss_pred CcCCEEEECCCHHHHHHHHHHHHCCCcEEEEeCCCCC
Confidence 4589999999999999999999999999999987654
No 148
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=98.55 E-value=1.3e-07 Score=87.94 Aligned_cols=35 Identities=20% Similarity=0.284 Sum_probs=32.3
Q ss_pred CcEEEECCchhHHHHHHhhhccCceEEEEcCCCcc
Q 018704 63 PRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRNHM 97 (351)
Q Consensus 63 ~~VvIIG~G~aGl~aA~~L~~~g~~v~vie~~~~~ 97 (351)
.+|+||||||+||++|..|++.|++|+|||+.+..
T Consensus 2 m~V~IVGaGpaGl~~A~~L~~~G~~v~v~Er~~~~ 36 (412)
T 4hb9_A 2 MHVGIIGAGIGGTCLAHGLRKHGIKVTIYERNSAA 36 (412)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCSS
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCCEEEEecCCCC
Confidence 58999999999999999999999999999987543
No 149
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans}
Probab=98.55 E-value=3e-07 Score=82.87 Aligned_cols=92 Identities=20% Similarity=0.280 Sum_probs=73.4
Q ss_pred CeEEEECCChHHHHHHHHHHHHHHHHHHhhhcCCCCccEEEEEeCCCC------------CCCC-----cHHHHHHHHHH
Q 018704 231 LHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEI------------LSSF-----DDRLRHYATTQ 293 (351)
Q Consensus 231 ~~v~VvGgG~~a~e~a~~l~~~~~~~~~~~~~~~~~~~~v~~~~~~~~------------l~~~-----~~~~~~~~~~~ 293 (351)
.+|+|||||+.|+.+|..|.+.+ .+|+++++... .+.+ ...+.+.+.+.
T Consensus 9 ~dvvIIG~G~aGl~aA~~l~~~g--------------~~v~lie~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 74 (325)
T 2q7v_A 9 YDVVIIGGGPAGLTAAIYTGRAQ--------------LSTLILEKGMPGGQIAWSEEVENFPGFPEPIAGMELAQRMHQQ 74 (325)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTT--------------CCEEEEESSCTTGGGGGCSCBCCSTTCSSCBCHHHHHHHHHHH
T ss_pred CCEEEECCCHHHHHHHHHHHHcC--------------CcEEEEeCCCCCcccccccccccCCCCCCCCCHHHHHHHHHHH
Confidence 48999999999999999998876 88999998621 1222 24566777778
Q ss_pred hhhcCcEEEcCeEEEEeCC-------eEEecCCcEEeccEEEEecCCCCc
Q 018704 294 LSKSGVRLVRGIVKDVDSQ-------KLILNDGTEVPYGLLVWSTGVGPS 336 (351)
Q Consensus 294 l~~~gV~~~~~~v~~v~~~-------~v~~~~g~~~~~D~vi~a~G~~p~ 336 (351)
+++.|++++.++|.+++.+ .+.+.+|+++.+|.||+|+|.+|.
T Consensus 75 ~~~~gv~~~~~~v~~i~~~~~~~~~~~v~~~~g~~~~~~~vv~AtG~~~~ 124 (325)
T 2q7v_A 75 AEKFGAKVEMDEVQGVQHDATSHPYPFTVRGYNGEYRAKAVILATGADPR 124 (325)
T ss_dssp HHHTTCEEEECCEEEEEECTTSSSCCEEEEESSCEEEEEEEEECCCEEEC
T ss_pred HHHcCCEEEeeeEEEEEeccCCCceEEEEECCCCEEEeCEEEECcCCCcC
Confidence 8888999998878877532 466778889999999999998776
No 150
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=98.55 E-value=2.8e-07 Score=82.58 Aligned_cols=92 Identities=13% Similarity=0.247 Sum_probs=74.4
Q ss_pred CeEEEECCChHHHHHHHHHHHHHHHHHHhhhcCCCCccEEEEEeCC---CC--------CCCC----cHHHHHHHHHHhh
Q 018704 231 LHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN---EI--------LSSF----DDRLRHYATTQLS 295 (351)
Q Consensus 231 ~~v~VvGgG~~a~e~a~~l~~~~~~~~~~~~~~~~~~~~v~~~~~~---~~--------l~~~----~~~~~~~~~~~l~ 295 (351)
.+|+|||||..|+.+|..|.+.+ .+|+++++. .+ .+.+ ..++.+.+.+.++
T Consensus 16 ~~vvIIG~G~aGl~aA~~l~~~g--------------~~v~lie~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (323)
T 3f8d_A 16 FDVIIVGLGPAAYGAALYSARYM--------------LKTLVIGETPGGQLTEAGIVDDYLGLIEIQASDMIKVFNKHIE 81 (323)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTT--------------CCEEEEESSTTGGGGGCCEECCSTTSTTEEHHHHHHHHHHHHH
T ss_pred cCEEEECccHHHHHHHHHHHHCC--------------CcEEEEeccCCCeecccccccccCCCCCCCHHHHHHHHHHHHH
Confidence 48999999999999999999876 889999985 11 1222 2467777788888
Q ss_pred hcCcEEEcCeEEEEeCC----eEEecCCcEEeccEEEEecCCCCc
Q 018704 296 KSGVRLVRGIVKDVDSQ----KLILNDGTEVPYGLLVWSTGVGPS 336 (351)
Q Consensus 296 ~~gV~~~~~~v~~v~~~----~v~~~~g~~~~~D~vi~a~G~~p~ 336 (351)
+.|++++..+|.+++.+ .+.+.+|.++.+|.||+|+|..|.
T Consensus 82 ~~~v~~~~~~v~~i~~~~~~~~v~~~~g~~~~~d~lvlAtG~~~~ 126 (323)
T 3f8d_A 82 KYEVPVLLDIVEKIENRGDEFVVKTKRKGEFKADSVILGIGVKRR 126 (323)
T ss_dssp TTTCCEEESCEEEEEEC--CEEEEESSSCEEEEEEEEECCCCEEC
T ss_pred HcCCEEEEEEEEEEEecCCEEEEEECCCCEEEcCEEEECcCCCCc
Confidence 88999999768888654 467778889999999999999876
No 151
>2qa1_A PGAE, polyketide oxygenase PGAE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 1.80A {Streptomyces}
Probab=98.54 E-value=2.2e-07 Score=89.05 Aligned_cols=38 Identities=24% Similarity=0.275 Sum_probs=33.8
Q ss_pred CCCCcEEEECCchhHHHHHHhhhccCceEEEEcCCCcc
Q 018704 60 NEKPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRNHM 97 (351)
Q Consensus 60 ~~~~~VvIIG~G~aGl~aA~~L~~~g~~v~vie~~~~~ 97 (351)
.+.+||+||||||+||++|..|++.|++|+|||+.+..
T Consensus 9 ~~~~dVlIVGaGpaGl~~A~~La~~G~~v~vlE~~~~~ 46 (500)
T 2qa1_A 9 RSDAAVIVVGAGPAGMMLAGELRLAGVEVVVLERLVER 46 (500)
T ss_dssp CSBCSEEEECCSHHHHHHHHHHHHTTCCEEEEESCCC-
T ss_pred cCCCCEEEECcCHHHHHHHHHHHHCCCCEEEEeCCCCC
Confidence 35589999999999999999999999999999987543
No 152
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=98.54 E-value=2.2e-07 Score=83.92 Aligned_cols=94 Identities=21% Similarity=0.277 Sum_probs=74.6
Q ss_pred ccCeEEEECCChHHHHHHHHHHHHHHHHHHhhhcCCCCccEEEEEeCCC----C-------------CCCC-----cHHH
Q 018704 229 RLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANE----I-------------LSSF-----DDRL 286 (351)
Q Consensus 229 ~~~~v~VvGgG~~a~e~a~~l~~~~~~~~~~~~~~~~~~~~v~~~~~~~----~-------------l~~~-----~~~~ 286 (351)
..++|+|||||..|+.+|..|.+.+ .+|+++++.. . .+.+ ..++
T Consensus 21 ~~~~vvIIG~G~aGl~aA~~l~~~g--------------~~v~vie~~~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~ 86 (338)
T 3itj_A 21 VHNKVTIIGSGPAAHTAAIYLARAE--------------IKPILYEGMMANGIAAGGQLTTTTEIENFPGFPDGLTGSEL 86 (338)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTT--------------CCCEEECCSSBTTBCTTCGGGGSSEECCSTTCTTCEEHHHH
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCC--------------CCEEEEecCCCCCCCcCcccccchhhcccCCCcccCCHHHH
Confidence 3469999999999999999999876 8899999832 0 1122 2477
Q ss_pred HHHHHHHhhhcCcEEEcCeEEEEeC--CeEEe-----cCCcEEeccEEEEecCCCCc
Q 018704 287 RHYATTQLSKSGVRLVRGIVKDVDS--QKLIL-----NDGTEVPYGLLVWSTGVGPS 336 (351)
Q Consensus 287 ~~~~~~~l~~~gV~~~~~~v~~v~~--~~v~~-----~~g~~~~~D~vi~a~G~~p~ 336 (351)
...+.+.+++.|++++.++|.+++. +.+.+ .++.++.+|.||+|+|.+|.
T Consensus 87 ~~~~~~~~~~~gv~i~~~~v~~i~~~~~~~~v~~~~~~~~~~~~~d~vvlAtG~~~~ 143 (338)
T 3itj_A 87 MDRMREQSTKFGTEIITETVSKVDLSSKPFKLWTEFNEDAEPVTTDAIILATGASAK 143 (338)
T ss_dssp HHHHHHHHHHTTCEEECSCEEEEECSSSSEEEEETTCSSSCCEEEEEEEECCCEEEC
T ss_pred HHHHHHHHHHcCCEEEEeEEEEEEEcCCEEEEEEEecCCCcEEEeCEEEECcCCCcC
Confidence 7888888999999999998888865 34444 46778999999999998776
No 153
>3h8l_A NADH oxidase; membrane protein, complete form, rossman-like fold, oxidoreductase; HET: FAD; 2.57A {Acidianus ambivalens} PDB: 3h8i_A*
Probab=98.54 E-value=1.1e-07 Score=88.76 Aligned_cols=95 Identities=16% Similarity=0.270 Sum_probs=72.1
Q ss_pred CeEEEECCChHHHHHHHHHHHHHHHHHHhhhcCCCCccEEEEEeCCCC---CCC---------CcHHHHHHHHHHhhhcC
Q 018704 231 LHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEI---LSS---------FDDRLRHYATTQLSKSG 298 (351)
Q Consensus 231 ~~v~VvGgG~~a~e~a~~l~~~~~~~~~~~~~~~~~~~~v~~~~~~~~---l~~---------~~~~~~~~~~~~l~~~g 298 (351)
++|+|||||.+|+.+|..|.+.. ..+.+|+++++++. .+. ...++...+.+.+++.|
T Consensus 2 ~~VvIIGgG~aGl~aA~~L~~~~-----------~~g~~V~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 70 (409)
T 3h8l_A 2 TKVLVLGGRFGALTAAYTLKRLV-----------GSKADVKVINKSRFSYFRPALPHVAIGVRDVDELKVDLSEALPEKG 70 (409)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHH-----------GGGSEEEEEESSSEEEECCSSCCCCSSCCCCCCEEEEHHHHTGGGT
T ss_pred CeEEEECCCHHHHHHHHHHHhhC-----------CCCCeEEEEeCCCCceeccchhhcccCCcCHHHHHHHHHHHHhhCC
Confidence 48999999999999999998711 01289999998641 111 11233344566777889
Q ss_pred cEEEcCeEEEEeCC--eEEecCCcE----EeccEEEEecCCCCc
Q 018704 299 VRLVRGIVKDVDSQ--KLILNDGTE----VPYGLLVWSTGVGPS 336 (351)
Q Consensus 299 V~~~~~~v~~v~~~--~v~~~~g~~----~~~D~vi~a~G~~p~ 336 (351)
++++.++|++++.+ .|.+.+|.. +++|.||+|+|.+|+
T Consensus 71 v~~~~~~v~~i~~~~~~V~~~~g~~~~~~~~~d~lViAtG~~~~ 114 (409)
T 3h8l_A 71 IQFQEGTVEKIDAKSSMVYYTKPDGSMAEEEYDYVIVGIGAHLA 114 (409)
T ss_dssp CEEEECEEEEEETTTTEEEEECTTSCEEEEECSEEEECCCCEEC
T ss_pred eEEEEeeEEEEeCCCCEEEEccCCcccceeeCCEEEECCCCCcC
Confidence 99999999888764 788877764 999999999999887
No 154
>2qa2_A CABE, polyketide oxygenase CABE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 2.70A {Streptomyces}
Probab=98.53 E-value=2.5e-07 Score=88.60 Aligned_cols=38 Identities=24% Similarity=0.294 Sum_probs=33.7
Q ss_pred CCCCcEEEECCchhHHHHHHhhhccCceEEEEcCCCcc
Q 018704 60 NEKPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRNHM 97 (351)
Q Consensus 60 ~~~~~VvIIG~G~aGl~aA~~L~~~g~~v~vie~~~~~ 97 (351)
+..+||+||||||+||++|..|++.|++|+|||+.+..
T Consensus 10 ~~~~dVlIVGaGpaGl~~A~~La~~G~~v~vlE~~~~~ 47 (499)
T 2qa2_A 10 RSDASVIVVGAGPAGLMLAGELRLGGVDVMVLEQLPQR 47 (499)
T ss_dssp -CCEEEEEECCSHHHHHHHHHHHHTTCCEEEEESCSSC
T ss_pred CCCCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCCCC
Confidence 35689999999999999999999999999999987543
No 155
>1d4d_A Flavocytochrome C fumarate reductase; oxidoreductase; HET: HEM FAD; 2.50A {Shewanella oneidensis} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1d4e_A* 1d4c_A*
Probab=98.52 E-value=1.7e-06 Score=84.36 Aligned_cols=37 Identities=24% Similarity=0.240 Sum_probs=34.1
Q ss_pred CCCcEEEECCchhHHHHHHhhhccCceEEEEcCCCcc
Q 018704 61 EKPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRNHM 97 (351)
Q Consensus 61 ~~~~VvIIG~G~aGl~aA~~L~~~g~~v~vie~~~~~ 97 (351)
..+||+|||||++||++|..|++.|++|+|+|+.+..
T Consensus 125 ~~~~v~viG~G~aG~~aa~~~~~~g~~v~~~e~~~~~ 161 (572)
T 1d4d_A 125 ETTDVVIIGSGGAGLAAAVSARDAGAKVILLEKEPIP 161 (572)
T ss_dssp EECSEEEECCSHHHHHHHHHHHSSSCCEEEECSSSSS
T ss_pred CCCCEEEECCCHHHHHHHHHHHHCCCcEEEEecCCCC
Confidence 3579999999999999999999999999999998764
No 156
>3e1t_A Halogenase; flavoprotein; HET: FAD; 2.05A {Chondromyces crocatus}
Probab=98.52 E-value=1.1e-07 Score=91.41 Aligned_cols=34 Identities=18% Similarity=0.189 Sum_probs=32.3
Q ss_pred CCcEEEECCchhHHHHHHhhhccCceEEEEcCCC
Q 018704 62 KPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRN 95 (351)
Q Consensus 62 ~~~VvIIG~G~aGl~aA~~L~~~g~~v~vie~~~ 95 (351)
++||+|||||++||++|+.|++.|++|+|||+.+
T Consensus 7 ~~dVvIVGgG~aGl~aA~~La~~G~~V~liE~~~ 40 (512)
T 3e1t_A 7 VFDLIVIGGGPGGSTLASFVAMRGHRVLLLEREA 40 (512)
T ss_dssp EEEEEEECCSHHHHHHHHHHHTTTCCEEEECSSC
T ss_pred cCCEEEECcCHHHHHHHHHHHhCCCCEEEEccCC
Confidence 4799999999999999999999999999999876
No 157
>1nhp_A NADH peroxidase; oxidoreductase (H2O2(A)); HET: FAD; 2.00A {Enterococcus faecalis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1npx_A* 1joa_A* 2npx_A* 1nhq_A* 1nhs_A* 1nhr_A* 1f8w_A*
Probab=98.51 E-value=3e-07 Score=86.87 Aligned_cols=101 Identities=18% Similarity=0.196 Sum_probs=70.3
Q ss_pred CCCcEEEECCchhHHHHHHhhhccCceEEEEcCCCccccchhhhhhhcccccccccccchhccchhhhcCCCeEEEE-EE
Q 018704 61 EKPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRNHMVFTPLLASTCVGTLEFRSVAEPIARIQPAISREPGSYFFL-SH 139 (351)
Q Consensus 61 ~~~~VvIIG~G~aGl~aA~~L~~~g~~v~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 139 (351)
..++|+|||||++|+.+|..|++.|.+|+|+|+.+..... .+...+...........++.++. ..
T Consensus 148 ~~~~vvIiG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~--------------~~~~~~~~~l~~~l~~~gv~i~~~~~ 213 (447)
T 1nhp_A 148 EVNNVVVIGSGYIGIEAAEAFAKAGKKVTVIDILDRPLGV--------------YLDKEFTDVLTEEMEANNITIATGET 213 (447)
T ss_dssp TCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSTTTT--------------TCCHHHHHHHHHHHHTTTEEEEESCC
T ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCeEEEEecCcccccc--------------cCCHHHHHHHHHHHHhCCCEEEcCCE
Confidence 3579999999999999999999999999999997753210 01112222223334456788776 47
Q ss_pred eeeEeCCCCEEEEEeecCccccCCCceeEeeccEEEEecCCCcCCC
Q 018704 140 CAGIDTDNHVVHCETVTDELRTLEPWKFKISYDKLVIALGAEASTF 185 (351)
Q Consensus 140 v~~i~~~~~~v~~~~~~~~~~~~~~~~~~~~~d~lviAtG~~p~~p 185 (351)
|+.++.+.+...+.. ++. .+.+|.||+|+|..|+.+
T Consensus 214 v~~i~~~~~v~~v~~--~~~--------~i~~d~vi~a~G~~p~~~ 249 (447)
T 1nhp_A 214 VERYEGDGRVQKVVT--DKN--------AYDADLVVVAVGVRPNTA 249 (447)
T ss_dssp EEEEECSSBCCEEEE--SSC--------EEECSEEEECSCEEESCG
T ss_pred EEEEEccCcEEEEEE--CCC--------EEECCEEEECcCCCCChH
Confidence 888887643322322 344 799999999999988765
No 158
>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni}
Probab=98.51 E-value=5.8e-07 Score=80.28 Aligned_cols=92 Identities=16% Similarity=0.190 Sum_probs=72.0
Q ss_pred CeEEEECCChHHHHHHHHHHHHHHHHHHhhhcCCCCccEEEE-EeCCCC------------CCCCc-----HHHHHHHHH
Q 018704 231 LHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTL-IEANEI------------LSSFD-----DRLRHYATT 292 (351)
Q Consensus 231 ~~v~VvGgG~~a~e~a~~l~~~~~~~~~~~~~~~~~~~~v~~-~~~~~~------------l~~~~-----~~~~~~~~~ 292 (351)
++|+|||||+.|+.+|..|.+.+ .+|++ +++..+ .+.++ .++...+.+
T Consensus 5 ~~vvIIG~G~aGl~aA~~l~~~g--------------~~v~li~e~~~~gG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 70 (315)
T 3r9u_A 5 LDVAIIGGGPAGLSAGLYATRGG--------------LKNVVMFEKGMPGGQITSSSEIENYPGVAQVMDGISFMAPWSE 70 (315)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHT--------------CSCEEEECSSSTTGGGGGCSCBCCSTTCCSCBCHHHHHHHHHH
T ss_pred ceEEEECCCHHHHHHHHHHHHCC--------------CCeEEEEeCCCCCceeeeeceeccCCCCCCCCCHHHHHHHHHH
Confidence 48999999999999999999876 78999 887421 12222 567788888
Q ss_pred HhhhcCcEEEcCeEEEE-eC--CeEE--ecCCcEEeccEEEEecCCCCc
Q 018704 293 QLSKSGVRLVRGIVKDV-DS--QKLI--LNDGTEVPYGLLVWSTGVGPS 336 (351)
Q Consensus 293 ~l~~~gV~~~~~~v~~v-~~--~~v~--~~~g~~~~~D~vi~a~G~~p~ 336 (351)
.+++.+++++.++|.++ +. +.+. +..+.++.+|.||+|+|..|.
T Consensus 71 ~~~~~~v~~~~~~v~~i~~~~~~~~~v~~~~~~~~~~d~lvlAtG~~~~ 119 (315)
T 3r9u_A 71 QCMRFGLKHEMVGVEQILKNSDGSFTIKLEGGKTELAKAVIVCTGSAPK 119 (315)
T ss_dssp HHTTTCCEEECCCEEEEEECTTSCEEEEETTSCEEEEEEEEECCCEEEC
T ss_pred HHHHcCcEEEEEEEEEEecCCCCcEEEEEecCCEEEeCEEEEeeCCCCC
Confidence 88999999999988887 44 3444 543338999999999998776
No 159
>3c96_A Flavin-containing monooxygenase; FAD, oxidoreductase, PF01266, NESG, PAR240, structural genomics, PSI-2; HET: FAD; 1.90A {Pseudomonas aeruginosa PAO1} SCOP: c.3.1.2 d.16.1.2 PDB: 2rgj_A*
Probab=98.50 E-value=1.5e-07 Score=87.79 Aligned_cols=35 Identities=11% Similarity=0.212 Sum_probs=32.8
Q ss_pred CCcEEEECCchhHHHHHHhhhccCce-EEEEcCCCc
Q 018704 62 KPRVVVLGSGWAGCRLMKGIDTSLYD-VVCVSPRNH 96 (351)
Q Consensus 62 ~~~VvIIG~G~aGl~aA~~L~~~g~~-v~vie~~~~ 96 (351)
.+||+|||||++||++|..|++.|++ |+|||+.+.
T Consensus 4 ~~dVvIVGaG~aGl~~A~~L~~~G~~~v~v~E~~~~ 39 (410)
T 3c96_A 4 PIDILIAGAGIGGLSCALALHQAGIGKVTLLESSSE 39 (410)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESSSS
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCCeEEEEECCCC
Confidence 47999999999999999999999999 999998765
No 160
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}
Probab=98.49 E-value=4.7e-07 Score=82.24 Aligned_cols=88 Identities=17% Similarity=0.232 Sum_probs=70.4
Q ss_pred eEEEECCChHHHHHHHHHHHHHHHHHHhhhcCCCCccEEEEEeCCCCC----------------------CCCc------
Q 018704 232 HCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEIL----------------------SSFD------ 283 (351)
Q Consensus 232 ~v~VvGgG~~a~e~a~~l~~~~~~~~~~~~~~~~~~~~v~~~~~~~~l----------------------~~~~------ 283 (351)
+|+|||||..|+.+|..|.+.+ .+|+++++.+.+ +.++
T Consensus 5 ~vvIIG~G~aGl~~A~~l~~~g--------------~~v~vie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 70 (357)
T 4a9w_A 5 DVVVIGGGQSGLSAGYFLRRSG--------------LSYVILDAEASPGGAWQHAWHSLHLFSPAGWSSIPGWPMPASQG 70 (357)
T ss_dssp EEEEECCSHHHHHHHHHHHHSS--------------CCEEEECCSSSSSGGGGGSCTTCBCSSCGGGSCCSSSCCCCCSS
T ss_pred CEEEECcCHHHHHHHHHHHHCC--------------CCEEEEECCCCCCCcccCCCCCcEecCchhhhhCCCCCCCCCcc
Confidence 8999999999999999999876 889999986321 1110
Q ss_pred -----HHHHHHHHHHhhhcCcEEEcC-eEEEEeC--Ce---EEecCCcEEeccEEEEecCCC
Q 018704 284 -----DRLRHYATTQLSKSGVRLVRG-IVKDVDS--QK---LILNDGTEVPYGLLVWSTGVG 334 (351)
Q Consensus 284 -----~~~~~~~~~~l~~~gV~~~~~-~v~~v~~--~~---v~~~~g~~~~~D~vi~a~G~~ 334 (351)
..+.+.+.+.+++.|++++.+ +|++++. +. |.+.+| ++++|.||+|+|..
T Consensus 71 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~v~~i~~~~~~~~~v~~~~g-~~~~d~vV~AtG~~ 131 (357)
T 4a9w_A 71 PYPARAEVLAYLAQYEQKYALPVLRPIRVQRVSHFGERLRVVARDGR-QWLARAVISATGTW 131 (357)
T ss_dssp SSCBHHHHHHHHHHHHHHTTCCEECSCCEEEEEEETTEEEEEETTSC-EEEEEEEEECCCSG
T ss_pred CCCCHHHHHHHHHHHHHHcCCEEEcCCEEEEEEECCCcEEEEEeCCC-EEEeCEEEECCCCC
Confidence 467778888888899999999 4888764 34 666666 89999999999964
No 161
>2yqu_A 2-oxoglutarate dehydrogenase E3 component; lipoamide dehydrogenase, 2-oxoglutarate dehydrogenase comple pyruvate dehydrogenase complex; HET: FAD; 1.70A {Thermus thermophilus} PDB: 2eq7_A*
Probab=98.48 E-value=1.9e-07 Score=88.43 Aligned_cols=101 Identities=16% Similarity=0.232 Sum_probs=70.7
Q ss_pred CCcEEEECCchhHHHHHHhhhccCceEEEEcCCCccccchhhhhhhcccccccccccchhccchhhhcCCCeEEEE-EEe
Q 018704 62 KPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRNHMVFTPLLASTCVGTLEFRSVAEPIARIQPAISREPGSYFFL-SHC 140 (351)
Q Consensus 62 ~~~VvIIG~G~aGl~aA~~L~~~g~~v~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~v 140 (351)
..+|+|||||++|+.+|..|++.|.+|+|+|+.+.+. +. ....+.+.........++.++. .+|
T Consensus 167 ~~~vvIiGgG~~g~e~A~~l~~~g~~V~lv~~~~~~l--~~-------------~~~~~~~~l~~~l~~~Gv~i~~~~~V 231 (455)
T 2yqu_A 167 PKRLIVVGGGVIGLELGVVWHRLGAEVIVLEYMDRIL--PT-------------MDLEVSRAAERVFKKQGLTIRTGVRV 231 (455)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSC--TT-------------SCHHHHHHHHHHHHHHTCEEECSCCE
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCEEEEEecCCccc--cc-------------cCHHHHHHHHHHHHHCCCEEEECCEE
Confidence 4789999999999999999999999999999987632 00 0011111111122234666665 478
Q ss_pred eeEeCCCCEEEEEeecCccccCCCceeEeeccEEEEecCCCcCCCC
Q 018704 141 AGIDTDNHVVHCETVTDELRTLEPWKFKISYDKLVIALGAEASTFG 186 (351)
Q Consensus 141 ~~i~~~~~~v~~~~~~~~~~~~~~~~~~~~~d~lviAtG~~p~~p~ 186 (351)
+.++.+.+.+.+.. .++. .+.+|.||+|+|..|+.+.
T Consensus 232 ~~i~~~~~~v~v~~-~~g~--------~i~~D~vv~A~G~~p~~~~ 268 (455)
T 2yqu_A 232 TAVVPEAKGARVEL-EGGE--------VLEADRVLVAVGRRPYTEG 268 (455)
T ss_dssp EEEEEETTEEEEEE-TTSC--------EEEESEEEECSCEEECCTT
T ss_pred EEEEEeCCEEEEEE-CCCe--------EEEcCEEEECcCCCcCCCC
Confidence 88887666665543 3455 8999999999999887654
No 162
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A*
Probab=98.47 E-value=6.4e-07 Score=80.02 Aligned_cols=91 Identities=19% Similarity=0.272 Sum_probs=72.3
Q ss_pred eEEEECCChHHHHHHHHHHHHHHHHHHhhhcCCCCcc-EEEEEeCCCC------------CCCC-----cHHHHHHHHHH
Q 018704 232 HCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYI-HVTLIEANEI------------LSSF-----DDRLRHYATTQ 293 (351)
Q Consensus 232 ~v~VvGgG~~a~e~a~~l~~~~~~~~~~~~~~~~~~~-~v~~~~~~~~------------l~~~-----~~~~~~~~~~~ 293 (351)
+|+|||||+.|+.+|..|.+.+ . +|++++++.. .+.+ ...+.+.+.+.
T Consensus 3 dvvIIG~G~aGl~aA~~l~~~g--------------~~~v~lie~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 68 (311)
T 2q0l_A 3 DCAIIGGGPAGLSAGLYATRGG--------------VKNAVLFEKGMPGGQITGSSEIENYPGVKEVVSGLDFMQPWQEQ 68 (311)
T ss_dssp EEEEECCSHHHHHHHHHHHHTT--------------CSSEEEECSSSTTCGGGGCSCBCCSTTCCSCBCHHHHHHHHHHH
T ss_pred eEEEECccHHHHHHHHHHHHCC--------------CCcEEEEcCCCCCcccccccccccCCCCcccCCHHHHHHHHHHH
Confidence 7999999999999999998866 7 8999998521 1222 14566777778
Q ss_pred hhhcCcEEEcCeEEEEeC--C--eEEecCCcEEeccEEEEecCCCCc
Q 018704 294 LSKSGVRLVRGIVKDVDS--Q--KLILNDGTEVPYGLLVWSTGVGPS 336 (351)
Q Consensus 294 l~~~gV~~~~~~v~~v~~--~--~v~~~~g~~~~~D~vi~a~G~~p~ 336 (351)
+++.|++++.++|.+++. + .+.+.+|+++.+|.||+|+|.+|.
T Consensus 69 ~~~~~v~~~~~~v~~i~~~~~~~~v~~~~g~~~~~~~vv~AtG~~~~ 115 (311)
T 2q0l_A 69 CFRFGLKHEMTAVQRVSKKDSHFVILAEDGKTFEAKSVIIATGGSPK 115 (311)
T ss_dssp HHTTSCEEECSCEEEEEEETTEEEEEETTSCEEEEEEEEECCCEEEC
T ss_pred HHHcCCEEEEEEEEEEEEcCCEEEEEEcCCCEEECCEEEECCCCCCC
Confidence 888899999877877753 4 566778888999999999998766
No 163
>3alj_A 2-methyl-3-hydroxypyridine-5-carboxylic acid OXYG; alpha/beta fold, oxidoreductase; HET: FAD; 1.48A {Mesorhizobium loti} PDB: 3alh_A* 3ali_A* 3gmb_A* 3gmc_A* 3alk_A* 3alm_A* 3all_A*
Probab=98.47 E-value=1.6e-06 Score=79.84 Aligned_cols=92 Identities=24% Similarity=0.266 Sum_probs=73.7
Q ss_pred CeEEEECCChHHHHHHHHHHHHHHHHHHhhhcCCCCccEEEEEeCCCCCCC-----------------------------
Q 018704 231 LHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEILSS----------------------------- 281 (351)
Q Consensus 231 ~~v~VvGgG~~a~e~a~~l~~~~~~~~~~~~~~~~~~~~v~~~~~~~~l~~----------------------------- 281 (351)
.+|+|||||.+|+.+|..|.+.| .+|+++++......
T Consensus 12 ~dVvIVGaG~aGl~~A~~L~~~G--------------~~v~viE~~~~~~~~~~~~~l~~~~~~~l~~~g~~~~~~~~~~ 77 (379)
T 3alj_A 12 RRAEVAGGGFAGLTAAIALKQNG--------------WDVRLHEKSSELRAFGAGIYLWHNGLRVLEGLGALDDVLQGSH 77 (379)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT--------------CEEEEECSSSSCCCCSSEEEEEHHHHHHHHHTTCHHHHHTTCB
T ss_pred CeEEEECCCHHHHHHHHHHHHCC--------------CCEEEEecCCCCCCCCceEEeCccHHHHHHHcCCHHHHHhhCC
Confidence 48999999999999999999876 89999998642210
Q ss_pred ----------------Cc-----------HHHHHHHHHHhhhcCcEEEcCe-EEEEeCC-eEEecCCcEEeccEEEEecC
Q 018704 282 ----------------FD-----------DRLRHYATTQLSKSGVRLVRGI-VKDVDSQ-KLILNDGTEVPYGLLVWSTG 332 (351)
Q Consensus 282 ----------------~~-----------~~~~~~~~~~l~~~gV~~~~~~-v~~v~~~-~v~~~~g~~~~~D~vi~a~G 332 (351)
++ ..+.+.+.+.+.+.||+++.+. |++++.+ .|++.+|+++++|.||.|+|
T Consensus 78 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~gv~i~~~~~v~~i~~~~~v~~~~g~~~~ad~vV~AdG 157 (379)
T 3alj_A 78 TPPTYETWMHNKSVSKETFNGLPWRIMTRSHLHDALVNRARALGVDISVNSEAVAADPVGRLTLQTGEVLEADLIVGADG 157 (379)
T ss_dssp CCSCEEEEETTEEEEEECGGGCCEEEEEHHHHHHHHHHHHHHTTCEEESSCCEEEEETTTEEEETTSCEEECSEEEECCC
T ss_pred CccceEEEeCCceeeeccCCCCceEEECHHHHHHHHHHHHHhcCCEEEeCCEEEEEEeCCEEEECCCCEEEcCEEEECCC
Confidence 00 3345667777888899999995 8888643 67788898999999999999
Q ss_pred CCCc
Q 018704 333 VGPS 336 (351)
Q Consensus 333 ~~p~ 336 (351)
..+.
T Consensus 158 ~~s~ 161 (379)
T 3alj_A 158 VGSK 161 (379)
T ss_dssp TTCH
T ss_pred ccHH
Confidence 8875
No 164
>2r0c_A REBC; flavin adenine dinucleotide, monooxygenase, oxidoreductase; HET: FAD; 1.80A {Lechevalieria aerocolonigenes} PDB: 2r0g_A* 2r0p_A* 3ept_A*
Probab=98.46 E-value=2.4e-07 Score=89.93 Aligned_cols=36 Identities=19% Similarity=0.289 Sum_probs=33.0
Q ss_pred CCcEEEECCchhHHHHHHhhhccCceEEEEcCCCcc
Q 018704 62 KPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRNHM 97 (351)
Q Consensus 62 ~~~VvIIG~G~aGl~aA~~L~~~g~~v~vie~~~~~ 97 (351)
.+||+||||||+||++|..|++.|++|+|||+.+..
T Consensus 26 ~~dVlIVGaGpaGl~~A~~La~~G~~V~vlEr~~~~ 61 (549)
T 2r0c_A 26 ETDVLILGGGPVGMALALDLAHRQVGHLVVEQTDGT 61 (549)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSCSC
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCCEEEEeCCCCC
Confidence 479999999999999999999999999999987543
No 165
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=98.46 E-value=4.6e-07 Score=81.60 Aligned_cols=91 Identities=23% Similarity=0.291 Sum_probs=72.4
Q ss_pred CeEEEECCChHHHHHHHHHHHHHHHHHHhhhcCCCCccEEEEEeCCCCC----------------CCC----cHHHHHHH
Q 018704 231 LHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEIL----------------SSF----DDRLRHYA 290 (351)
Q Consensus 231 ~~v~VvGgG~~a~e~a~~l~~~~~~~~~~~~~~~~~~~~v~~~~~~~~l----------------~~~----~~~~~~~~ 290 (351)
++|+|||||..|+.+|..|.+.+ .+|+++++.+.+ +.+ ..++...+
T Consensus 8 ~~vvIIG~G~aGl~aA~~l~~~g--------------~~v~lie~~~~~gG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 73 (332)
T 3lzw_A 8 YDITIIGGGPVGLFTAFYGGMRQ--------------ASVKIIESLPQLGGQLSALYPEKYIYDVAGFPKIRAQELINNL 73 (332)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTT--------------CCEEEECSSSSSCHHHHHHCTTSEECCSTTCSSEEHHHHHHHH
T ss_pred ceEEEECCCHHHHHHHHHHHHCC--------------CCEEEEEcCCCCCceehhcCCCceEeccCCCCCCCHHHHHHHH
Confidence 48999999999999999998866 899999996421 111 25677778
Q ss_pred HHHhhhcCcEEEcC-eEEEEeC--C---eEEecCCcEEeccEEEEecCC---CCc
Q 018704 291 TTQLSKSGVRLVRG-IVKDVDS--Q---KLILNDGTEVPYGLLVWSTGV---GPS 336 (351)
Q Consensus 291 ~~~l~~~gV~~~~~-~v~~v~~--~---~v~~~~g~~~~~D~vi~a~G~---~p~ 336 (351)
.+.+++.+++++.+ +|.+++. + .+.+.+|+ +.+|.||+|+|. .|.
T Consensus 74 ~~~~~~~~~~~~~~~~v~~i~~~~~~~~~v~~~~g~-~~~d~vVlAtG~~~~~p~ 127 (332)
T 3lzw_A 74 KEQMAKFDQTICLEQAVESVEKQADGVFKLVTNEET-HYSKTVIITAGNGAFKPR 127 (332)
T ss_dssp HHHHTTSCCEEECSCCEEEEEECTTSCEEEEESSEE-EEEEEEEECCTTSCCEEC
T ss_pred HHHHHHhCCcEEccCEEEEEEECCCCcEEEEECCCE-EEeCEEEECCCCCcCCCC
Confidence 88888889999998 4888864 2 56677775 999999999999 555
No 166
>2v3a_A Rubredoxin reductase; alkane degradation, NADH oxidoreductase, rubredoxin reductas NAD, flavoprotein, oxidoreductase; HET: FAD; 2.4A {Pseudomonas aeruginosa} PDB: 2v3b_A*
Probab=98.45 E-value=5e-07 Score=83.57 Aligned_cols=100 Identities=25% Similarity=0.368 Sum_probs=70.3
Q ss_pred CCcEEEECCchhHHHHHHhhhccCceEEEEcCCCccccchhhhhhhcccccccccccchhccchhhhcCCCeEEEEE-Ee
Q 018704 62 KPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRNHMVFTPLLASTCVGTLEFRSVAEPIARIQPAISREPGSYFFLS-HC 140 (351)
Q Consensus 62 ~~~VvIIG~G~aGl~aA~~L~~~g~~v~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~v 140 (351)
..+|+|||+|+.|+.+|..|++.|.+|+++|+.+.+... . ....+...........++.++.. +|
T Consensus 145 ~~~v~ViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~~~~----------~----~~~~~~~~l~~~l~~~gv~i~~~~~v 210 (384)
T 2v3a_A 145 KRRVLLLGAGLIGCEFANDLSSGGYQLDVVAPCEQVMPG----------L----LHPAAAKAVQAGLEGLGVRFHLGPVL 210 (384)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSSTT----------T----SCHHHHHHHHHHHHTTTCEEEESCCE
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCeEEEEecCcchhhc----------c----cCHHHHHHHHHHHHHcCCEEEeCCEE
Confidence 578999999999999999999999999999997753210 0 01112222222233457777654 68
Q ss_pred eeEeCCCCEEEEEeecCccccCCCceeEeeccEEEEecCCCcCC
Q 018704 141 AGIDTDNHVVHCETVTDELRTLEPWKFKISYDKLVIALGAEAST 184 (351)
Q Consensus 141 ~~i~~~~~~v~~~~~~~~~~~~~~~~~~~~~d~lviAtG~~p~~ 184 (351)
..++.+...+.+.. .+++ ++.+|.||+|+|..|+.
T Consensus 211 ~~i~~~~~~~~v~~-~~g~--------~i~~d~vv~a~G~~p~~ 245 (384)
T 2v3a_A 211 ASLKKAGEGLEAHL-SDGE--------VIPCDLVVSAVGLRPRT 245 (384)
T ss_dssp EEEEEETTEEEEEE-TTSC--------EEEESEEEECSCEEECC
T ss_pred EEEEecCCEEEEEE-CCCC--------EEECCEEEECcCCCcCH
Confidence 88876655555543 4565 89999999999988765
No 167
>3nlc_A Uncharacterized protein VP0956; FAD-binding protein, NESG, structural genomics, PSI-2, prote structure initiative; HET: FAD; 2.15A {Vibrio parahaemolyticus}
Probab=98.45 E-value=2.6e-07 Score=89.08 Aligned_cols=103 Identities=16% Similarity=0.208 Sum_probs=79.0
Q ss_pred CeEEEECCChHHHHHHHHHHHHHHHHHHhhhcCCCCccEEEEEeCCCCC-------------------------------
Q 018704 231 LHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEIL------------------------------- 279 (351)
Q Consensus 231 ~~v~VvGgG~~a~e~a~~l~~~~~~~~~~~~~~~~~~~~v~~~~~~~~l------------------------------- 279 (351)
++|+|||||++|+-+|..|++.| .+|+++++....
T Consensus 108 ~DVVIVGgGpaGL~aA~~La~~G--------------~kV~VlEr~~~~~~R~~~~~g~w~~~~~~~~~~i~~g~gGag~ 173 (549)
T 3nlc_A 108 ERPIVIGFGPCGLFAGLVLAQMG--------------FNPIIVERGKEVRERTKDTFGFWRKRTLNPESNVQFGEGGAGT 173 (549)
T ss_dssp CCCEEECCSHHHHHHHHHHHHTT--------------CCCEEECSSCCHHHHHHHHHHHHHHCCCCTTSSSSSSTTGGGT
T ss_pred CCEEEECcCHHHHHHHHHHHHCC--------------CeEEEEEccCcccccccchhcccccccccccccceeccCCccc
Confidence 48999999999999999999876 889999876210
Q ss_pred ------------CCC------------------------------cHHHHHHHHHHhhhcCcEEEcCe-EEEEeC--C--
Q 018704 280 ------------SSF------------------------------DDRLRHYATTQLSKSGVRLVRGI-VKDVDS--Q-- 312 (351)
Q Consensus 280 ------------~~~------------------------------~~~~~~~~~~~l~~~gV~~~~~~-v~~v~~--~-- 312 (351)
+.+ ...+.+.+.+.+++.|+++++++ |+++.. +
T Consensus 174 ~sdgkl~~~i~~~~~~~~~v~~~~~~~G~~~~i~~~~~p~~G~~~~~~l~~~L~~~l~~~Gv~I~~~t~V~~I~~~~~~v 253 (549)
T 3nlc_A 174 FSDGKLYSQVKDPNFYGRKVITEFVEAGAPEEILYVSKPHIGTFKLVTMIEKMRATIIELGGEIRFSTRVDDLHMEDGQI 253 (549)
T ss_dssp TSCCCCCCCSCCTTCHHHHHHHHHHHTTCCGGGGTBSSCCCCHHHHHHHHHHHHHHHHHTTCEEESSCCEEEEEESSSBE
T ss_pred ccCCceEEEeccccccHHHHHHHHHHcCCCceEeeccccccccchHHHHHHHHHHHHHhcCCEEEeCCEEEEEEEeCCEE
Confidence 000 03455667777888999999995 888853 2
Q ss_pred -eEEecCCcEEeccEEEEecCCCCc---cccccCCCCCC
Q 018704 313 -KLILNDGTEVPYGLLVWSTGVGPS---TLVKSLDLPKS 347 (351)
Q Consensus 313 -~v~~~~g~~~~~D~vi~a~G~~p~---~~~~~~gl~~~ 347 (351)
+|.+.+|+++.||.||+|+|..+. .++..+|++..
T Consensus 254 ~gV~l~~G~~i~Ad~VVlA~G~~s~~~~~~l~~~Gi~~~ 292 (549)
T 3nlc_A 254 TGVTLSNGEEIKSRHVVLAVGHSARDTFEMLHERGVYME 292 (549)
T ss_dssp EEEEETTSCEEECSCEEECCCTTCHHHHHHHHHTTCCCE
T ss_pred EEEEECCCCEEECCEEEECCCCChhhHHHHHHHcCCCcc
Confidence 477889999999999999999996 35566666543
No 168
>2eq6_A Pyruvate dehydrogenase complex, dihydrolipoamide dehydrogenase E3 component; oxidoreductase, homodimer, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2eq8_A* 2eq9_A*
Probab=98.45 E-value=4.2e-07 Score=86.30 Aligned_cols=104 Identities=16% Similarity=0.173 Sum_probs=70.7
Q ss_pred CCcEEEECCchhHHHHHHhhhccCceEEEEcCCCccccchhhhhhhcccccccccccchhccchhhhcCCCeEEEE-EEe
Q 018704 62 KPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRNHMVFTPLLASTCVGTLEFRSVAEPIARIQPAISREPGSYFFL-SHC 140 (351)
Q Consensus 62 ~~~VvIIG~G~aGl~aA~~L~~~g~~v~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~v 140 (351)
..+|+|||||+.|+.+|..|++.|.+|+|+|+.+.+... ....+.+.........++.++. .+|
T Consensus 169 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~---------------~~~~~~~~l~~~l~~~gV~i~~~~~v 233 (464)
T 2eq6_A 169 PKRLLVIGGGAVGLELGQVYRRLGAEVTLIEYMPEILPQ---------------GDPETAALLRRALEKEGIRVRTKTKA 233 (464)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSTT---------------SCHHHHHHHHHHHHHTTCEEECSEEE
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCeEEEEEcCCccccc---------------cCHHHHHHHHHHHHhcCCEEEcCCEE
Confidence 478999999999999999999999999999997753210 0111222222223334777665 478
Q ss_pred eeEeCCCCEEEEEeecC--ccccCCCceeEeeccEEEEecCCCcCCCC
Q 018704 141 AGIDTDNHVVHCETVTD--ELRTLEPWKFKISYDKLVIALGAEASTFG 186 (351)
Q Consensus 141 ~~i~~~~~~v~~~~~~~--~~~~~~~~~~~~~~d~lviAtG~~p~~p~ 186 (351)
+.++.+.+.+.+....+ ++ ..++.+|.||+|+|..|+...
T Consensus 234 ~~i~~~~~~~~v~~~~~~~g~------~~~i~~D~vv~a~G~~p~~~~ 275 (464)
T 2eq6_A 234 VGYEKKKDGLHVRLEPAEGGE------GEEVVVDKVLVAVGRKPRTEG 275 (464)
T ss_dssp EEEEEETTEEEEEEEETTCCS------CEEEEESEEEECSCEEESCTT
T ss_pred EEEEEeCCEEEEEEeecCCCc------eeEEEcCEEEECCCcccCCCC
Confidence 88877665555433213 32 136899999999999887754
No 169
>2aqj_A Tryptophan halogenase, pRNA; flavin-dependent halogenase, helical bundle, sandwiched sheets, structural genomics; HET: TRP FAD; 1.80A {Pseudomonas fluorescens} PDB: 2apg_A* 2ar8_A* 2ard_A* 2jkc_A*
Probab=98.44 E-value=3.7e-07 Score=88.33 Aligned_cols=34 Identities=15% Similarity=0.220 Sum_probs=31.9
Q ss_pred CCcEEEECCchhHHHHHHhhhc---cCceEEEEcCCC
Q 018704 62 KPRVVVLGSGWAGCRLMKGIDT---SLYDVVCVSPRN 95 (351)
Q Consensus 62 ~~~VvIIG~G~aGl~aA~~L~~---~g~~v~vie~~~ 95 (351)
.+||+|||||++|+++|..|++ .|++|+|||+..
T Consensus 5 ~~dVvIVGgG~aGl~aA~~La~~~~~G~~V~liE~~~ 41 (538)
T 2aqj_A 5 IKNIVIVGGGTAGWMAASYLVRALQQQANITLIESAA 41 (538)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCCSSCEEEEEECSS
T ss_pred CCeEEEECCCHHHHHHHHHHHhhcCCCCEEEEECCCC
Confidence 4799999999999999999999 999999999864
No 170
>1q1r_A Putidaredoxin reductase; glutathione reductase fold, oxidoreductase; HET: FAD; 1.91A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1q1w_A* 3lb8_A*
Probab=98.43 E-value=6e-07 Score=84.39 Aligned_cols=94 Identities=26% Similarity=0.390 Sum_probs=70.3
Q ss_pred CeEEEECCChHHHHHHHHHHHHHHHHHHhhhcCCCCccEEEEEeCCCCCCC----CcH----------HHHHHHHHHhhh
Q 018704 231 LHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEILSS----FDD----------RLRHYATTQLSK 296 (351)
Q Consensus 231 ~~v~VvGgG~~a~e~a~~l~~~~~~~~~~~~~~~~~~~~v~~~~~~~~l~~----~~~----------~~~~~~~~~l~~ 296 (351)
++|+|||||..|+.+|..|.+.+. ..+|+++++...++- +.. .+.....+.+++
T Consensus 5 ~~vvIIGgG~aGl~aA~~l~~~g~------------~~~V~lie~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 72 (431)
T 1q1r_A 5 DNVVIVGTGLAGVEVAFGLRASGW------------EGNIRLVGDATVIPHHLPPLSKAYLAGKATAESLYLRTPDAYAA 72 (431)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTC------------CSEEEEECSCCSCCBCSGGGGTTTTTTCSCSGGGBSSCHHHHHH
T ss_pred CcEEEEcCHHHHHHHHHHHHccCc------------CCCEEEEECCCCCCCcCCCCcHHHhCCCCChHHhcccCHHHHHh
Confidence 489999999999999999988761 138999998643221 111 111111345667
Q ss_pred cCcEEEcCe-EEEEeC--CeEEecCCcEEeccEEEEecCCCCc
Q 018704 297 SGVRLVRGI-VKDVDS--QKLILNDGTEVPYGLLVWSTGVGPS 336 (351)
Q Consensus 297 ~gV~~~~~~-v~~v~~--~~v~~~~g~~~~~D~vi~a~G~~p~ 336 (351)
.||+++.+. |..++. ..|.+.+|+++.+|.||+|||.+|.
T Consensus 73 ~gv~~~~~~~v~~i~~~~~~v~~~~g~~~~~d~lviAtG~~p~ 115 (431)
T 1q1r_A 73 QNIQLLGGTQVTAINRDRQQVILSDGRALDYDRLVLATGGRPR 115 (431)
T ss_dssp TTEEEECSCCEEEEETTTTEEEETTSCEEECSEEEECCCEEEC
T ss_pred CCCEEEeCCEEEEEECCCCEEEECCCCEEECCEEEEcCCCCcc
Confidence 899999995 888875 5788888989999999999999887
No 171
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A*
Probab=98.42 E-value=1.1e-06 Score=81.89 Aligned_cols=94 Identities=19% Similarity=0.272 Sum_probs=70.8
Q ss_pred CeEEEECCChHHHHHHHHHHHHHHHHHHhhhcCCCCccEEEEEeCCCCCCC----CcHHHHH---------HHHHHhhhc
Q 018704 231 LHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEILSS----FDDRLRH---------YATTQLSKS 297 (351)
Q Consensus 231 ~~v~VvGgG~~a~e~a~~l~~~~~~~~~~~~~~~~~~~~v~~~~~~~~l~~----~~~~~~~---------~~~~~l~~~ 297 (351)
++|+|||||..|+.+|..|.+.+ ...+|+++++.+..+- +...... ...+.+++.
T Consensus 3 ~~vvIIGaG~AGl~aA~~L~~~g------------~~~~V~li~~~~~~~y~~~~l~~~~~~g~~~~~~~~~~~~~~~~~ 70 (410)
T 3ef6_A 3 THVAIIGNGVGGFTTAQALRAEG------------FEGRISLIGDEPHLPYDRPSLSKAVLDGSLERPPILAEADWYGEA 70 (410)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT------------CCSEEEEEECSSSSSBCSGGGGTHHHHTSSSSCCBSSCTTHHHHT
T ss_pred CCEEEEcccHHHHHHHHHHHccC------------cCCeEEEEECCCCCCcCCccccHHHhCCCCCHHHhcCCHHHHHHC
Confidence 38999999999999999998876 1246999999753321 1111111 112345677
Q ss_pred CcEEEcC-eEEEEeC--CeEEecCCcEEeccEEEEecCCCCc
Q 018704 298 GVRLVRG-IVKDVDS--QKLILNDGTEVPYGLLVWSTGVGPS 336 (351)
Q Consensus 298 gV~~~~~-~v~~v~~--~~v~~~~g~~~~~D~vi~a~G~~p~ 336 (351)
+|+++.+ +|..++. ..|.+.+|+++.+|.+|+|||.+|.
T Consensus 71 ~i~~~~~~~v~~id~~~~~v~~~~g~~~~~d~lvlAtG~~p~ 112 (410)
T 3ef6_A 71 RIDMLTGPEVTALDVQTRTISLDDGTTLSADAIVIATGSRAR 112 (410)
T ss_dssp TCEEEESCCEEEEETTTTEEEETTSCEEECSEEEECCCEEEC
T ss_pred CCEEEeCCEEEEEECCCCEEEECCCCEEECCEEEEccCCccc
Confidence 9999999 6999876 4788899999999999999998876
No 172
>3c4n_A Uncharacterized protein DR_0571; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.40A {Deinococcus radiodurans R1}
Probab=98.42 E-value=1.8e-07 Score=87.17 Aligned_cols=34 Identities=18% Similarity=0.164 Sum_probs=31.9
Q ss_pred CCcEEEECCchhHHHHHHhhhcc--CceEEEEcCCC
Q 018704 62 KPRVVVLGSGWAGCRLMKGIDTS--LYDVVCVSPRN 95 (351)
Q Consensus 62 ~~~VvIIG~G~aGl~aA~~L~~~--g~~v~vie~~~ 95 (351)
.+||+|||||++|+++|+.|++. |++|+|||+..
T Consensus 36 ~~dVvIIGaGi~Gls~A~~La~~~pG~~V~vlE~~~ 71 (405)
T 3c4n_A 36 AFDIVVIGAGRMGAACAFYLRQLAPGRSLLLVEEGG 71 (405)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHHCTTSCEEEECSSC
T ss_pred cCCEEEECCcHHHHHHHHHHHhcCCCCeEEEEeCCC
Confidence 47999999999999999999999 99999999864
No 173
>3h28_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3h27_A* 3h29_A* 3hyv_A* 3hyw_A* 3hyx_A*
Probab=98.41 E-value=1.8e-07 Score=87.97 Aligned_cols=94 Identities=22% Similarity=0.393 Sum_probs=71.2
Q ss_pred CeEEEECCChHHHHHHHHHHHHHHHHHHhhhcCCCCccEEEEEeCCCCCCC---C---------cHHHHHHHHHHhhhcC
Q 018704 231 LHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEILSS---F---------DDRLRHYATTQLSKSG 298 (351)
Q Consensus 231 ~~v~VvGgG~~a~e~a~~l~~~~~~~~~~~~~~~~~~~~v~~~~~~~~l~~---~---------~~~~~~~~~~~l~~~g 298 (351)
++|+|||||..|+.+|..|.+++ .+.+|+++++++.... + ..++...+.+.+++.|
T Consensus 3 ~~vvIIGgG~aGl~aA~~L~~~~------------~g~~Vtlie~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~g 70 (430)
T 3h28_A 3 KHVVVIGGGVGGIATAYNLRNLM------------PDLKITLISDRPYFGFTPAFPHLAMGWRKFEDISVPLAPLLPKFN 70 (430)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHC------------TTCEEEEECSSSEEECGGGHHHHHHTCSCGGGSEEESTTTGGGGT
T ss_pred CCEEEECccHHHHHHHHHHHcCC------------CCCeEEEECCCCCCCcCCCcchhccCccCHHHHHHHHHHHHHhcC
Confidence 48999999999999999998732 2389999999752211 0 0111122334566789
Q ss_pred cEEEcCeEEEEeCC--eEEecCCcEEeccEEEEecCCCCc
Q 018704 299 VRLVRGIVKDVDSQ--KLILNDGTEVPYGLLVWSTGVGPS 336 (351)
Q Consensus 299 V~~~~~~v~~v~~~--~v~~~~g~~~~~D~vi~a~G~~p~ 336 (351)
|+++.++++.++.+ .|.+.+|+++.+|.+|+|+|.+|+
T Consensus 71 v~~~~~~v~~id~~~~~v~~~~g~~i~~d~liiAtG~~~~ 110 (430)
T 3h28_A 71 IEFINEKAESIDPDANTVTTQSGKKIEYDYLVIATGPKLV 110 (430)
T ss_dssp EEEECSCEEEEETTTTEEEETTCCEEECSEEEECCCCEEE
T ss_pred CEEEEEEEEEEECCCCEEEECCCcEEECCEEEEcCCcccc
Confidence 99999889988764 788889988999999999999877
No 174
>3v76_A Flavoprotein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: FDA; 2.51A {Sinorhizobium meliloti}
Probab=98.41 E-value=7.5e-07 Score=83.27 Aligned_cols=89 Identities=18% Similarity=0.265 Sum_probs=69.7
Q ss_pred eEEEECCChHHHHHHHHHHHHHHHHHHhhhcCCCCccEEEEEeCCCCCC----------------------------C--
Q 018704 232 HCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEILS----------------------------S-- 281 (351)
Q Consensus 232 ~v~VvGgG~~a~e~a~~l~~~~~~~~~~~~~~~~~~~~v~~~~~~~~l~----------------------------~-- 281 (351)
+|+|||||.+|+-+|..|++.| .+|+++++.+... .
T Consensus 29 dViIIGgG~AGl~aA~~La~~G--------------~~V~llEk~~~~g~~~~~sGgg~~n~t~~~~~~~~~~~~~~~~~ 94 (417)
T 3v76_A 29 DVVIIGAGAAGMMCAIEAGKRG--------------RRVLVIDHARAPGEKIRISGGGRCNFTNIHASPRNFLSGNPHFC 94 (417)
T ss_dssp CEEEECCSHHHHHHHHHHHHTT--------------CCEEEECSSSSSCHHHHHSGGGTCEEEETTCSGGGEEESSTTTT
T ss_pred CEEEECcCHHHHHHHHHHHHCC--------------CcEEEEeCCCCCCceeEEcCCCceeccCCCCCHHHHhhcCHHHH
Confidence 8999999999999999999877 8899998864210 0
Q ss_pred -----------------------------------CcHHHHHHHHHHhhhcCcEEEcCe-EEEEeC--C--eEEecCCcE
Q 018704 282 -----------------------------------FDDRLRHYATTQLSKSGVRLVRGI-VKDVDS--Q--KLILNDGTE 321 (351)
Q Consensus 282 -----------------------------------~~~~~~~~~~~~l~~~gV~~~~~~-v~~v~~--~--~v~~~~g~~ 321 (351)
....+.+.+.+.+++.||+++.+. |+++.. + .|.+.+| +
T Consensus 95 ~~~l~~~~~~~~~~~~~~~Gi~~~~~~~g~~~~~~~~~~l~~~L~~~l~~~Gv~i~~~~~V~~i~~~~~~~~V~~~~g-~ 173 (417)
T 3v76_A 95 KSALARYRPQDFVALVERHGIGWHEKTLGQLFCDHSAKDIIRMLMAEMKEAGVQLRLETSIGEVERTASGFRVTTSAG-T 173 (417)
T ss_dssp HHHHHHSCHHHHHHHHHHTTCCEEECSTTEEEESSCHHHHHHHHHHHHHHHTCEEECSCCEEEEEEETTEEEEEETTE-E
T ss_pred HHHHHhcCHHHHHHHHHHcCCCcEEeeCCEEeeCCCHHHHHHHHHHHHHHCCCEEEECCEEEEEEEeCCEEEEEECCc-E
Confidence 012455667777888899999994 888853 3 4556666 8
Q ss_pred EeccEEEEecCCCC
Q 018704 322 VPYGLLVWSTGVGP 335 (351)
Q Consensus 322 ~~~D~vi~a~G~~p 335 (351)
+.||.||+|+|..+
T Consensus 174 i~ad~VIlAtG~~S 187 (417)
T 3v76_A 174 VDAASLVVASGGKS 187 (417)
T ss_dssp EEESEEEECCCCSS
T ss_pred EEeeEEEECCCCcc
Confidence 99999999999887
No 175
>2gjc_A Thiazole biosynthetic enzyme, mitochondrial; glutathione reductase type II family, thiazole synthase, mitochondria DNA repair; HET: AHZ; 1.82A {Saccharomyces cerevisiae} PDB: 3fpz_A*
Probab=98.41 E-value=8.6e-07 Score=79.53 Aligned_cols=36 Identities=17% Similarity=0.197 Sum_probs=32.8
Q ss_pred CCcEEEECCchhHHHHHHhhhcc--CceEEEEcCCCcc
Q 018704 62 KPRVVVLGSGWAGCRLMKGIDTS--LYDVVCVSPRNHM 97 (351)
Q Consensus 62 ~~~VvIIG~G~aGl~aA~~L~~~--g~~v~vie~~~~~ 97 (351)
.+||+|||||++||++|..|++. |++|+|+|+++..
T Consensus 65 ~~dv~IiG~G~aGl~aA~~la~~~~g~~V~v~e~~~~~ 102 (326)
T 2gjc_A 65 VSDVIIVGAGSSGLSAAYVIAKNRPDLKVCIIESSVAP 102 (326)
T ss_dssp EESEEEECCSHHHHHHHHHHHHHCTTSCEEEECSSSSC
T ss_pred cCCEEEECccHHHHHHHHHHHhcCCCCeEEEEecCccc
Confidence 35999999999999999999998 9999999987654
No 176
>1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphi oxidoreductase, oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5
Probab=98.40 E-value=1.1e-06 Score=78.44 Aligned_cols=91 Identities=16% Similarity=0.183 Sum_probs=71.8
Q ss_pred eEEEECCChHHHHHHHHHHHHHHHHHHhhhcCCCCccEEEEEeCCC---CC--------CC----CcHHHHHHHHHHhhh
Q 018704 232 HCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANE---IL--------SS----FDDRLRHYATTQLSK 296 (351)
Q Consensus 232 ~v~VvGgG~~a~e~a~~l~~~~~~~~~~~~~~~~~~~~v~~~~~~~---~l--------~~----~~~~~~~~~~~~l~~ 296 (351)
+|+|||||+.|+.+|..|.+.+ .+|+++++.. +. .. ....+...+.+.+++
T Consensus 3 dvvIIG~G~aGl~aA~~l~~~g--------------~~v~li~~~~gG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 68 (310)
T 1fl2_A 3 DVLIVGSGPAGAAAAIYSARKG--------------IRTGLMGERFGGQILDTVDIENYISVPKTEGQKLAGALKVHVDE 68 (310)
T ss_dssp EEEEECCSHHHHHHHHHHHTTT--------------CCEEEECSSTTGGGGGCCEECCBTTBSSEEHHHHHHHHHHHHHT
T ss_pred CEEEECcCHHHHHHHHHHHHCC--------------CcEEEEeCCCCceeccccccccccCcCCCCHHHHHHHHHHHHHH
Confidence 7999999999999999998766 7899987531 10 01 124667777888888
Q ss_pred cCcEEEcC-eEEEEeCC-------eEEecCCcEEeccEEEEecCCCCc
Q 018704 297 SGVRLVRG-IVKDVDSQ-------KLILNDGTEVPYGLLVWSTGVGPS 336 (351)
Q Consensus 297 ~gV~~~~~-~v~~v~~~-------~v~~~~g~~~~~D~vi~a~G~~p~ 336 (351)
.|++++.+ +|..++.+ .+.+.+|+++.+|.||+|+|.+|.
T Consensus 69 ~~v~~~~~~~v~~i~~~~~~~~~~~v~~~~g~~~~~~~lv~AtG~~~~ 116 (310)
T 1fl2_A 69 YDVDVIDSQSASKLIPAAVEGGLHQIETASGAVLKARSIIVATGAKWR 116 (310)
T ss_dssp SCEEEECSCCEEEEECCSSTTCCEEEEETTSCEEEEEEEEECCCEEEC
T ss_pred cCCeEEccCEEEEEEecccCCceEEEEECCCCEEEeCEEEECcCCCcC
Confidence 99999999 69988532 466778888999999999998776
No 177
>1lvl_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD NAD; 2.45A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.39 E-value=2.9e-07 Score=87.29 Aligned_cols=101 Identities=17% Similarity=0.262 Sum_probs=68.6
Q ss_pred CCcEEEECCchhHHHHHHhhhccCceEEEEcCCCccccchhhhhhhcccccccccccchhccchhhhcCCCeEEEE-EEe
Q 018704 62 KPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRNHMVFTPLLASTCVGTLEFRSVAEPIARIQPAISREPGSYFFL-SHC 140 (351)
Q Consensus 62 ~~~VvIIG~G~aGl~aA~~L~~~g~~v~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~v 140 (351)
..+|+|||||++|+.+|..|++.|.+|+|+|+.+.+.- . +...+...........++.++. .+|
T Consensus 171 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~--~-------------~~~~~~~~l~~~l~~~gv~i~~~~~v 235 (458)
T 1lvl_A 171 PQHLVVVGGGYIGLELGIAYRKLGAQVSVVEARERILP--T-------------YDSELTAPVAESLKKLGIALHLGHSV 235 (458)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHHTCEEEEECSSSSSST--T-------------SCHHHHHHHHHHHHHHTCEEETTCEE
T ss_pred CCeEEEECcCHHHHHHHHHHHHCCCeEEEEEcCCcccc--c-------------cCHHHHHHHHHHHHHCCCEEEECCEE
Confidence 47899999999999999999999999999999876320 0 0111111111122334666665 478
Q ss_pred eeEeCCCCEEEEEeecCccccCCCceeEeeccEEEEecCCCcCCCC
Q 018704 141 AGIDTDNHVVHCETVTDELRTLEPWKFKISYDKLVIALGAEASTFG 186 (351)
Q Consensus 141 ~~i~~~~~~v~~~~~~~~~~~~~~~~~~~~~d~lviAtG~~p~~p~ 186 (351)
+.++. .+ +.+.. .+|+ ...+.+|.||+|+|..|+.+.
T Consensus 236 ~~i~~-~~-v~v~~-~~G~------~~~i~~D~vv~a~G~~p~~~~ 272 (458)
T 1lvl_A 236 EGYEN-GC-LLAND-GKGG------QLRLEADRVLVAVGRRPRTKG 272 (458)
T ss_dssp EEEET-TE-EEEEC-SSSC------CCEECCSCEEECCCEEECCSS
T ss_pred EEEEe-CC-EEEEE-CCCc------eEEEECCEEEECcCCCcCCCC
Confidence 88887 43 55542 3341 127999999999999888764
No 178
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=98.39 E-value=9.1e-07 Score=79.93 Aligned_cols=90 Identities=17% Similarity=0.225 Sum_probs=70.4
Q ss_pred CeEEEECCChHHHHHHHHHHHHHHHHHHhhhcCCCCccEEEEEeCCCCC----------------CCC----cHHHHHHH
Q 018704 231 LHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEIL----------------SSF----DDRLRHYA 290 (351)
Q Consensus 231 ~~v~VvGgG~~a~e~a~~l~~~~~~~~~~~~~~~~~~~~v~~~~~~~~l----------------~~~----~~~~~~~~ 290 (351)
.+|+|||||..|+.+|..|.+.+ .+|+++++.+.. +.+ ..++...+
T Consensus 6 ~~vvIIG~G~aGl~aA~~l~~~g--------------~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 71 (335)
T 2zbw_A 6 TDVLIVGAGPTGLFAGFYVGMRG--------------LSFRFVDPLPEPGGQLTALYPEKYIYDVAGFPKVYAKDLVKGL 71 (335)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTT--------------CCEEEEESSSSSCHHHHHTCTTSEECCSTTCSSEEHHHHHHHH
T ss_pred CcEEEECCCHHHHHHHHHHHhCC--------------CCEEEEeCCCCCCCeeeccCCCceeeccCCCCCCCHHHHHHHH
Confidence 38999999999999999998765 889999986321 111 24566677
Q ss_pred HHHhhhcCcEEEcC-eEEEEeCC----eEEecCCcEEeccEEEEecCCC
Q 018704 291 TTQLSKSGVRLVRG-IVKDVDSQ----KLILNDGTEVPYGLLVWSTGVG 334 (351)
Q Consensus 291 ~~~l~~~gV~~~~~-~v~~v~~~----~v~~~~g~~~~~D~vi~a~G~~ 334 (351)
.+.+++.+++++.+ +|.+++.+ .+.+.+|.++.+|.||+|+|..
T Consensus 72 ~~~~~~~~~~~~~~~~v~~i~~~~~~~~v~~~~g~~~~~~~lv~AtG~~ 120 (335)
T 2zbw_A 72 VEQVAPFNPVYSLGERAETLEREGDLFKVTTSQGNAYTAKAVIIAAGVG 120 (335)
T ss_dssp HHHHGGGCCEEEESCCEEEEEEETTEEEEEETTSCEEEEEEEEECCTTS
T ss_pred HHHHHHcCCEEEeCCEEEEEEECCCEEEEEECCCCEEEeCEEEECCCCC
Confidence 77888889999988 48887642 3666778889999999999984
No 179
>4gde_A UDP-galactopyranose mutase; flavin adenine dinucleotide binding, nucleotide binding, MUT isomerase; HET: FDA; 2.20A {Aspergillus fumigatus} PDB: 3ute_A* 3utg_A* 3uth_A* 4gdc_A* 4gdd_A* 3utf_A* 3ukh_A* 3ukf_A* 3uka_A* 3ukl_A* 3ukk_A* 3ukq_A* 3ukp_A*
Probab=98.39 E-value=1.1e-07 Score=91.28 Aligned_cols=49 Identities=24% Similarity=0.311 Sum_probs=42.0
Q ss_pred HHHHHHHHHHhhhcCcEEEcCe-EEEEeC--CeEEecCCcEEeccEEEEecC
Q 018704 284 DRLRHYATTQLSKSGVRLVRGI-VKDVDS--QKLILNDGTEVPYGLLVWSTG 332 (351)
Q Consensus 284 ~~~~~~~~~~l~~~gV~~~~~~-v~~v~~--~~v~~~~g~~~~~D~vi~a~G 332 (351)
..+.+.+.+.+.+.|++++++. |+++.. ..+++.+|+++.||.||.++.
T Consensus 222 ~~l~~~l~~~l~~~g~~i~~~~~V~~I~~~~~~v~~~~G~~~~ad~vI~t~P 273 (513)
T 4gde_A 222 GGIWIAVANTLPKEKTRFGEKGKVTKVNANNKTVTLQDGTTIGYKKLVSTMA 273 (513)
T ss_dssp HHHHHHHHHTSCGGGEEESGGGCEEEEETTTTEEEETTSCEEEEEEEEECSC
T ss_pred HHHHHHHHHHHHhcCeeeecceEEEEEEccCCEEEEcCCCEEECCEEEECCC
Confidence 3577778888899999999995 999865 578999999999999999875
No 180
>3lxd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutathione reductase (GR)-like ONFR; HET: FAD; 2.50A {Novosphingobium aromaticivorans}
Probab=98.38 E-value=9.3e-07 Score=82.63 Aligned_cols=101 Identities=17% Similarity=0.208 Sum_probs=70.7
Q ss_pred CCcEEEECCchhHHHHHHhhhccCceEEEEcCCCccccchhhhhhhcccccccccccchhccchhhhcCCCeEEEE-EEe
Q 018704 62 KPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRNHMVFTPLLASTCVGTLEFRSVAEPIARIQPAISREPGSYFFL-SHC 140 (351)
Q Consensus 62 ~~~VvIIG~G~aGl~aA~~L~~~g~~v~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~v 140 (351)
..+|+|||+|+.|+.+|..|++.|.+|+++++.+..... .....+...........++.++. ..|
T Consensus 152 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtvv~~~~~~l~~--------------~~~~~~~~~l~~~l~~~GV~i~~~~~v 217 (415)
T 3lxd_A 152 AKNAVVIGGGYIGLEAAAVLTKFGVNVTLLEALPRVLAR--------------VAGEALSEFYQAEHRAHGVDLRTGAAM 217 (415)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSTTTT--------------TSCHHHHHHHHHHHHHTTCEEEETCCE
T ss_pred CCeEEEECCCHHHHHHHHHHHhcCCeEEEEecCCchhhh--------------hcCHHHHHHHHHHHHhCCCEEEECCEE
Confidence 578999999999999999999999999999997764210 01112222222233445777765 578
Q ss_pred eeEeCCCCEEEEEeecCccccCCCceeEeeccEEEEecCCCcCC
Q 018704 141 AGIDTDNHVVHCETVTDELRTLEPWKFKISYDKLVIALGAEAST 184 (351)
Q Consensus 141 ~~i~~~~~~v~~~~~~~~~~~~~~~~~~~~~d~lviAtG~~p~~ 184 (351)
..+..+...+..-.+.+++ .+.+|.||+|+|..|+.
T Consensus 218 ~~i~~~~~~v~~v~l~dG~--------~i~aD~Vv~a~G~~p~~ 253 (415)
T 3lxd_A 218 DCIEGDGTKVTGVRMQDGS--------VIPADIVIVGIGIVPCV 253 (415)
T ss_dssp EEEEESSSBEEEEEESSSC--------EEECSEEEECSCCEESC
T ss_pred EEEEecCCcEEEEEeCCCC--------EEEcCEEEECCCCccCh
Confidence 8887765443222335666 89999999999998775
No 181
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=98.38 E-value=2.5e-06 Score=77.94 Aligned_cols=90 Identities=21% Similarity=0.239 Sum_probs=71.6
Q ss_pred CeEEEECCChHHHHHHHHHHHHHHHHHHhhhcCCCCccEEEEEeCCCCC----------------CCC----cHHHHHHH
Q 018704 231 LHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEIL----------------SSF----DDRLRHYA 290 (351)
Q Consensus 231 ~~v~VvGgG~~a~e~a~~l~~~~~~~~~~~~~~~~~~~~v~~~~~~~~l----------------~~~----~~~~~~~~ 290 (351)
.+|+|||||+.|+.+|..|.+.+ .+|+++++.+.+ +.+ ...+.+.+
T Consensus 15 ~dvvIIG~G~aGl~aA~~l~~~g--------------~~v~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 80 (360)
T 3ab1_A 15 RDLTIIGGGPTGIFAAFQCGMNN--------------ISCRIIESMPQLGGQLAALYPEKHIYDVAGFPEVPAIDLVESL 80 (360)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTT--------------CCEEEECSSSSSCHHHHHTCTTSEECCSTTCSSEEHHHHHHHH
T ss_pred CCEEEECCCHHHHHHHHHHHhCC--------------CCEEEEecCCCCCCcccccCCCcccccCCCCCCCCHHHHHHHH
Confidence 48999999999999999998766 899999986321 111 15666777
Q ss_pred HHHhhhcCcEEEcC-eEEEEeC--C---eEEecCCcEEeccEEEEecCCC
Q 018704 291 TTQLSKSGVRLVRG-IVKDVDS--Q---KLILNDGTEVPYGLLVWSTGVG 334 (351)
Q Consensus 291 ~~~l~~~gV~~~~~-~v~~v~~--~---~v~~~~g~~~~~D~vi~a~G~~ 334 (351)
.+.+++.+++++.+ +|.+++. + .|.+.+|+++.+|.||+|+|..
T Consensus 81 ~~~~~~~~~~~~~~~~v~~i~~~~~~~~~v~~~~g~~~~~~~li~AtG~~ 130 (360)
T 3ab1_A 81 WAQAERYNPDVVLNETVTKYTKLDDGTFETRTNTGNVYRSRAVLIAAGLG 130 (360)
T ss_dssp HHHHHTTCCEEECSCCEEEEEECTTSCEEEEETTSCEEEEEEEEECCTTC
T ss_pred HHHHHHhCCEEEcCCEEEEEEECCCceEEEEECCCcEEEeeEEEEccCCC
Confidence 78888889999998 4888864 2 4777788889999999999984
No 182
>1ebd_A E3BD, dihydrolipoamide dehydrogenase; redox-active center, glycolysis, oxidoreductase; HET: FAD; 2.60A {Geobacillus stearothermophilus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.37 E-value=1.1e-06 Score=83.05 Aligned_cols=104 Identities=15% Similarity=0.182 Sum_probs=69.7
Q ss_pred CCcEEEECCchhHHHHHHhhhccCceEEEEcCCCccccchhhhhhhcccccccccccchhccchhhhcCCCeEEEE-EEe
Q 018704 62 KPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRNHMVFTPLLASTCVGTLEFRSVAEPIARIQPAISREPGSYFFL-SHC 140 (351)
Q Consensus 62 ~~~VvIIG~G~aGl~aA~~L~~~g~~v~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~v 140 (351)
..+|+|||||+.|+.+|..|++.|.+|+|+|+.+.+.- . +...+...........++.++. .+|
T Consensus 170 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~-----~----------~~~~~~~~l~~~l~~~gv~i~~~~~v 234 (455)
T 1ebd_A 170 PKSLVVIGGGYIGIELGTAYANFGTKVTILEGAGEILS-----G----------FEKQMAAIIKKRLKKKGVEVVTNALA 234 (455)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSST-----T----------SCHHHHHHHHHHHHHTTCEEEESEEE
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCcEEEEEcCCcccc-----c----------cCHHHHHHHHHHHHHCCCEEEeCCEE
Confidence 47999999999999999999999999999999775320 0 1111212222223334777665 578
Q ss_pred eeEeCCCCEEEEEeecCccccCCCceeEeeccEEEEecCCCcCCCC
Q 018704 141 AGIDTDNHVVHCETVTDELRTLEPWKFKISYDKLVIALGAEASTFG 186 (351)
Q Consensus 141 ~~i~~~~~~v~~~~~~~~~~~~~~~~~~~~~d~lviAtG~~p~~p~ 186 (351)
..++.+...+.+....+++ ...+.+|.||+|+|..|+...
T Consensus 235 ~~i~~~~~~~~v~~~~~g~------~~~~~~D~vv~a~G~~p~~~~ 274 (455)
T 1ebd_A 235 KGAEEREDGVTVTYEANGE------TKTIDADYVLVTVGRRPNTDE 274 (455)
T ss_dssp EEEEEETTEEEEEEEETTE------EEEEEESEEEECSCEEESCSS
T ss_pred EEEEEeCCeEEEEEEeCCc------eeEEEcCEEEECcCCCcccCc
Confidence 8887665545443211111 127899999999999887653
No 183
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=98.37 E-value=2.5e-06 Score=78.04 Aligned_cols=90 Identities=16% Similarity=0.296 Sum_probs=68.1
Q ss_pred eEEEECCChHHHHHHHHHHHHHHHHHHhhhcCCCCcc-EEEEEeCCCC--------------CCC---------------
Q 018704 232 HCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYI-HVTLIEANEI--------------LSS--------------- 281 (351)
Q Consensus 232 ~v~VvGgG~~a~e~a~~l~~~~~~~~~~~~~~~~~~~-~v~~~~~~~~--------------l~~--------------- 281 (351)
+|+|||||.+|+.+|..|.+.+ . +|++++++.+ .+.
T Consensus 6 ~vvIIGaG~aGl~aA~~l~~~g--------------~~~v~lie~~~~Gg~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 71 (369)
T 3d1c_A 6 KVAIIGAGAAGIGMAITLKDFG--------------ITDVIILEKGTVGHSFKHWPKSTRTITPSFTSNGFGMPDMNAIS 71 (369)
T ss_dssp EEEEECCSHHHHHHHHHHHHTT--------------CCCEEEECSSSTTHHHHTSCTTCBCSSCCCCCGGGTCCCTTCSS
T ss_pred cEEEECcCHHHHHHHHHHHHcC--------------CCcEEEEecCCCCCccccCcccccccCcchhcccCCchhhhhcc
Confidence 8999999999999999998766 6 8999988640 000
Q ss_pred -------------Cc-HHHHHHHHHHhhhcCcEEEcCe-EEEEeCC----eEEecCCcEEeccEEEEecCCCCc
Q 018704 282 -------------FD-DRLRHYATTQLSKSGVRLVRGI-VKDVDSQ----KLILNDGTEVPYGLLVWSTGVGPS 336 (351)
Q Consensus 282 -------------~~-~~~~~~~~~~l~~~gV~~~~~~-v~~v~~~----~v~~~~g~~~~~D~vi~a~G~~p~ 336 (351)
.. ..+...+.+.+++.|++++.++ |.+++.+ .|.+.+| ++.+|.||+|+|..+.
T Consensus 72 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~gv~i~~~~~v~~i~~~~~~~~v~~~~g-~~~~d~vVlAtG~~~~ 144 (369)
T 3d1c_A 72 MDTSPAFTFNEEHISGETYAEYLQVVANHYELNIFENTVVTNISADDAYYTIATTTE-TYHADYIFVATGDYNF 144 (369)
T ss_dssp TTCCHHHHHCCSSCBHHHHHHHHHHHHHHTTCEEECSCCEEEEEECSSSEEEEESSC-CEEEEEEEECCCSTTS
T ss_pred ccccccccccccCCCHHHHHHHHHHHHHHcCCeEEeCCEEEEEEECCCeEEEEeCCC-EEEeCEEEECCCCCCc
Confidence 01 2345556677788899999995 8888643 4555666 6899999999998765
No 184
>1v59_A Dihydrolipoamide dehydrogenase; 2-oxoacid dehydroganese complex, pyruvate dehydrogenase complex; HET: FAD NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1jeh_A*
Probab=98.36 E-value=7.6e-07 Score=84.81 Aligned_cols=103 Identities=17% Similarity=0.204 Sum_probs=69.4
Q ss_pred CCcEEEECCchhHHHHHHhhhccCceEEEEcCCCccccchhhhhhhcccccccccccchhccchhhhcCCCeEEEE-EEe
Q 018704 62 KPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRNHMVFTPLLASTCVGTLEFRSVAEPIARIQPAISREPGSYFFL-SHC 140 (351)
Q Consensus 62 ~~~VvIIG~G~aGl~aA~~L~~~g~~v~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~v 140 (351)
..+|+|||||+.|+.+|..|++.|.+|+|+|+.+.+.- .+...+...........++.++. ..|
T Consensus 183 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~---------------~~~~~~~~~l~~~l~~~gv~i~~~~~v 247 (478)
T 1v59_A 183 PKRLTIIGGGIIGLEMGSVYSRLGSKVTVVEFQPQIGA---------------SMDGEVAKATQKFLKKQGLDFKLSTKV 247 (478)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSS---------------SSCHHHHHHHHHHHHHTTCEEECSEEE
T ss_pred CceEEEECCCHHHHHHHHHHHHcCCEEEEEEeCCcccc---------------ccCHHHHHHHHHHHHHCCCEEEeCCEE
Confidence 47999999999999999999999999999999775321 00111222222223344777765 478
Q ss_pred eeEeC--CCCEEEEEeec--CccccCCCceeEeeccEEEEecCCCcCCC
Q 018704 141 AGIDT--DNHVVHCETVT--DELRTLEPWKFKISYDKLVIALGAEASTF 185 (351)
Q Consensus 141 ~~i~~--~~~~v~~~~~~--~~~~~~~~~~~~~~~d~lviAtG~~p~~p 185 (351)
+.++. +.+.+.+...+ ++. ...+.+|.||+|+|..|+..
T Consensus 248 ~~i~~~~~~~~~~v~~~~~~~g~------~~~~~~D~vv~a~G~~p~~~ 290 (478)
T 1v59_A 248 ISAKRNDDKNVVEIVVEDTKTNK------QENLEAEVLLVAVGRRPYIA 290 (478)
T ss_dssp EEEEEETTTTEEEEEEEETTTTE------EEEEEESEEEECSCEEECCT
T ss_pred EEEEEecCCCeEEEEEEEcCCCC------ceEEECCEEEECCCCCcCCC
Confidence 88876 55544443211 111 12799999999999988765
No 185
>3fg2_P Putative rubredoxin reductase; ferredoxin reductase, RPA3782, F flavoprotein, oxidoreductase; HET: FAD; 2.20A {Rhodopseudomonas palustris}
Probab=98.36 E-value=8.1e-07 Score=82.73 Aligned_cols=101 Identities=18% Similarity=0.243 Sum_probs=70.1
Q ss_pred CCcEEEECCchhHHHHHHhhhccCceEEEEcCCCccccchhhhhhhcccccccccccchhccchhhhcCCCeEEEEE-Ee
Q 018704 62 KPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRNHMVFTPLLASTCVGTLEFRSVAEPIARIQPAISREPGSYFFLS-HC 140 (351)
Q Consensus 62 ~~~VvIIG~G~aGl~aA~~L~~~g~~v~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~v 140 (351)
..+|+|||+|+.|+.+|..|++.|.+|+++++.+..... .+...+...........++.++.. .|
T Consensus 142 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtvv~~~~~~~~~--------------~~~~~~~~~l~~~l~~~GV~i~~~~~v 207 (404)
T 3fg2_P 142 KKHVVVIGAGFIGLEFAATARAKGLEVDVVELAPRVMAR--------------VVTPEISSYFHDRHSGAGIRMHYGVRA 207 (404)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSTTTT--------------TSCHHHHHHHHHHHHHTTCEEECSCCE
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCEEEEEeCCCcchhh--------------ccCHHHHHHHHHHHHhCCcEEEECCEE
Confidence 468999999999999999999999999999997763210 011112222222334457777654 77
Q ss_pred eeEeCCCCEEEEEeecCccccCCCceeEeeccEEEEecCCCcCC
Q 018704 141 AGIDTDNHVVHCETVTDELRTLEPWKFKISYDKLVIALGAEAST 184 (351)
Q Consensus 141 ~~i~~~~~~v~~~~~~~~~~~~~~~~~~~~~d~lviAtG~~p~~ 184 (351)
..+..+...+..-.+.+|+ ++.+|.||+|+|..|..
T Consensus 208 ~~i~~~~~~v~~V~~~dG~--------~i~aD~Vv~a~G~~p~~ 243 (404)
T 3fg2_P 208 TEIAAEGDRVTGVVLSDGN--------TLPCDLVVVGVGVIPNV 243 (404)
T ss_dssp EEEEEETTEEEEEEETTSC--------EEECSEEEECCCEEECC
T ss_pred EEEEecCCcEEEEEeCCCC--------EEEcCEEEECcCCccCH
Confidence 8887655444322335676 89999999999998765
No 186
>4dgk_A Phytoene dehydrogenase; the FAD/NAD(P)-binding rossmann fold, oxidoreductase; 2.35A {Pantoea ananatis}
Probab=98.36 E-value=1.9e-07 Score=89.40 Aligned_cols=52 Identities=15% Similarity=0.141 Sum_probs=42.2
Q ss_pred HHHHHHHHHHhhhcCcEEEcCe-EEEEeC--C---eEEecCCcEEeccEEEEecCCCC
Q 018704 284 DRLRHYATTQLSKSGVRLVRGI-VKDVDS--Q---KLILNDGTEVPYGLLVWSTGVGP 335 (351)
Q Consensus 284 ~~~~~~~~~~l~~~gV~~~~~~-v~~v~~--~---~v~~~~g~~~~~D~vi~a~G~~p 335 (351)
..+.+.+.+.+++.|++|++++ |++|.. + +|+++||+++.||.||.+++...
T Consensus 221 ~~l~~aL~~~~~~~Gg~I~~~~~V~~I~~~~~~~~gV~~~~g~~~~ad~VV~~a~~~~ 278 (501)
T 4dgk_A 221 GALVQGMIKLFQDLGGEVVLNARVSHMETTGNKIEAVHLEDGRRFLTQAVASNADVVH 278 (501)
T ss_dssp HHHHHHHHHHHHHTTCEEECSCCEEEEEEETTEEEEEEETTSCEEECSCEEECCC---
T ss_pred cchHHHHHHHHHHhCCceeeecceeEEEeeCCeEEEEEecCCcEEEcCEEEECCCHHH
Confidence 4677888899999999999995 998853 3 58899999999999999887543
No 187
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=98.35 E-value=1e-06 Score=79.58 Aligned_cols=91 Identities=19% Similarity=0.237 Sum_probs=71.5
Q ss_pred CeEEEECCChHHHHHHHHHHHHHHHHHHhhhcCCCCccEEEEEeC----C-CC------------CCCC-----cHHHHH
Q 018704 231 LHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEA----N-EI------------LSSF-----DDRLRH 288 (351)
Q Consensus 231 ~~v~VvGgG~~a~e~a~~l~~~~~~~~~~~~~~~~~~~~v~~~~~----~-~~------------l~~~-----~~~~~~ 288 (351)
.+|+|||||+.|+.+|..|.+.+ .+|+++++ . .. .+.+ ...+..
T Consensus 9 ~~vvIIG~G~aGl~~A~~l~~~g--------------~~v~lie~~~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~ 74 (333)
T 1vdc_A 9 TRLCIVGSGPAAHTAAIYAARAE--------------LKPLLFEGWMANDIAPGGQLTTTTDVENFPGFPEGILGVELTD 74 (333)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTT--------------CCCEEECCSSBTTBCTTCGGGGCSEECCSTTCTTCEEHHHHHH
T ss_pred CCEEEECcCHHHHHHHHHHHHCC--------------CeEEEEeccCccccCCCceeeeccccccCCCCccCCCHHHHHH
Confidence 38999999999999999998876 88999998 2 11 1112 246667
Q ss_pred HHHHHhhhcCcEEEcCeEEEEeC--C--eEEecCCcEEeccEEEEecCCCCc
Q 018704 289 YATTQLSKSGVRLVRGIVKDVDS--Q--KLILNDGTEVPYGLLVWSTGVGPS 336 (351)
Q Consensus 289 ~~~~~l~~~gV~~~~~~v~~v~~--~--~v~~~~g~~~~~D~vi~a~G~~p~ 336 (351)
.+.+.+++.|++++.++|.+++. + .|.+ +|.++.+|.||+|+|.+|.
T Consensus 75 ~l~~~~~~~gv~~~~~~v~~i~~~~~~~~v~~-~~~~~~~~~vv~A~G~~~~ 125 (333)
T 1vdc_A 75 KFRKQSERFGTTIFTETVTKVDFSSKPFKLFT-DSKAILADAVILAIGAVAK 125 (333)
T ss_dssp HHHHHHHHTTCEEECCCCCEEECSSSSEEEEC-SSEEEEEEEEEECCCEEEC
T ss_pred HHHHHHHHCCCEEEEeEEEEEEEcCCEEEEEE-CCcEEEcCEEEECCCCCcC
Confidence 77788888999999998777764 2 4555 7788999999999998876
No 188
>1rp0_A ARA6, thiazole biosynthetic enzyme; protein ligand complex, biosynthetic protein; HET: AHZ HTO; 1.60A {Arabidopsis thaliana} SCOP: c.3.1.6
Probab=98.34 E-value=2.5e-06 Score=75.44 Aligned_cols=91 Identities=21% Similarity=0.281 Sum_probs=66.6
Q ss_pred eEEEECCChHHHHHHHHHHHH-HHHHHHhhhcCCCCccEEEEEeCCCCCCC-----------------------------
Q 018704 232 HCVVVGGGPTGVEFSGELSDF-IMRDVRQRYSHVKDYIHVTLIEANEILSS----------------------------- 281 (351)
Q Consensus 232 ~v~VvGgG~~a~e~a~~l~~~-~~~~~~~~~~~~~~~~~v~~~~~~~~l~~----------------------------- 281 (351)
+|+|||||.+|+.+|..|++. + .+|+++++......
T Consensus 41 dVvIIGgG~aGl~aA~~la~~~G--------------~~V~viEk~~~~gg~~~~~~~~~~~~~~~~~~~~~l~~~G~~~ 106 (284)
T 1rp0_A 41 DVVVVGAGSAGLSAAYEISKNPN--------------VQVAIIEQSVSPGGGAWLGGQLFSAMIVRKPAHLFLDEIGVAY 106 (284)
T ss_dssp EEEEECCSHHHHHHHHHHHTSTT--------------SCEEEEESSSSCCTTTTCCSTTCCCEEEETTTHHHHHHHTCCC
T ss_pred CEEEECccHHHHHHHHHHHHcCC--------------CeEEEEECCCCCCCceecCCcchHHHHcCcHHHHHHHHcCCCc
Confidence 799999999999999999874 5 89999998642210
Q ss_pred ----------CcHHHHHHHHHHhhh-cCcEEEcCe-EEEEeC--C---eEEec---------CC-----cEEeccEEEEe
Q 018704 282 ----------FDDRLRHYATTQLSK-SGVRLVRGI-VKDVDS--Q---KLILN---------DG-----TEVPYGLLVWS 330 (351)
Q Consensus 282 ----------~~~~~~~~~~~~l~~-~gV~~~~~~-v~~v~~--~---~v~~~---------~g-----~~~~~D~vi~a 330 (351)
....+...+.+.+.+ .||+++.+. |.++.. + ++.+. +| .++++|.||+|
T Consensus 107 ~~~~~~~~~~~~~~~~~~l~~~~~~~~gv~i~~~~~V~~i~~~~~~v~gv~~~~~~~~~~~~~g~~g~~~~i~ad~VV~A 186 (284)
T 1rp0_A 107 DEQDTYVVVKHAALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGNRVGGVVTNWALVAQNHHTQSCMDPNVMEAKIVVSS 186 (284)
T ss_dssp EECSSEEEESCHHHHHHHHHHHHHTSTTEEEEETEEEEEEEEETTEEEEEEEEEHHHHTCTTTSSCCCCEEEEEEEEEEC
T ss_pred ccCCCEEEecCHHHHHHHHHHHHHhcCCCEEEcCcEEEEEEecCCeEEEEEEeccccccccCccccCceEEEECCEEEEC
Confidence 123444556666655 699999994 888853 3 34442 32 56899999999
Q ss_pred cCCCCc
Q 018704 331 TGVGPS 336 (351)
Q Consensus 331 ~G~~p~ 336 (351)
+|..+.
T Consensus 187 tG~~s~ 192 (284)
T 1rp0_A 187 CGHDGP 192 (284)
T ss_dssp CCSSST
T ss_pred CCCchH
Confidence 997765
No 189
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A*
Probab=98.34 E-value=1.1e-06 Score=81.86 Aligned_cols=96 Identities=21% Similarity=0.300 Sum_probs=67.4
Q ss_pred CCcEEEECCchhHHHHHHhhhccCceEEEEcCCCccccchhhhhhhcccccccccccchhccchhhhcCCCeEEEEE-Ee
Q 018704 62 KPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRNHMVFTPLLASTCVGTLEFRSVAEPIARIQPAISREPGSYFFLS-HC 140 (351)
Q Consensus 62 ~~~VvIIG~G~aGl~aA~~L~~~g~~v~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~v 140 (351)
..+|+|||||+.|+.+|..|++.|.+|+++++.+...-. .+...+...........++.++.. .|
T Consensus 145 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~--------------~~~~~~~~~l~~~l~~~GV~i~~~~~v 210 (408)
T 2gqw_A 145 QSRLLIVGGGVIGLELAATARTAGVHVSLVETQPRLMSR--------------AAPATLADFVARYHAAQGVDLRFERSV 210 (408)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSSTT--------------TSCHHHHHHHHHHHHHTTCEEEESCCE
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCEEEEEEeCCccccc--------------ccCHHHHHHHHHHHHHcCcEEEeCCEE
Confidence 479999999999999999999999999999997753210 001111122222233457777665 78
Q ss_pred eeEeCCCCEEEEEeecCccccCCCceeEeeccEEEEecCCCcCC
Q 018704 141 AGIDTDNHVVHCETVTDELRTLEPWKFKISYDKLVIALGAEAST 184 (351)
Q Consensus 141 ~~i~~~~~~v~~~~~~~~~~~~~~~~~~~~~d~lviAtG~~p~~ 184 (351)
..++ ++ .+.+ .++. ++.+|.||+|+|..|+.
T Consensus 211 ~~i~-~~-~v~~---~~g~--------~i~~D~vi~a~G~~p~~ 241 (408)
T 2gqw_A 211 TGSV-DG-VVLL---DDGT--------RIAADMVVVGIGVLAND 241 (408)
T ss_dssp EEEE-TT-EEEE---TTSC--------EEECSEEEECSCEEECC
T ss_pred EEEE-CC-EEEE---CCCC--------EEEcCEEEECcCCCccH
Confidence 8887 43 4443 4565 89999999999988764
No 190
>2a87_A TRXR, TR, thioredoxin reductase; FAD, NAP, NMA, TLS, oxidoreduct structural genomics, PSI, protein structure initiative; HET: FAD NAP; 3.00A {Mycobacterium tuberculosis}
Probab=98.33 E-value=1.7e-06 Score=78.31 Aligned_cols=92 Identities=18% Similarity=0.226 Sum_probs=72.9
Q ss_pred CeEEEECCChHHHHHHHHHHHHHHHHHHhhhcCCCCccEEEEEeCCCC------------CCCC-----cHHHHHHHHHH
Q 018704 231 LHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEI------------LSSF-----DDRLRHYATTQ 293 (351)
Q Consensus 231 ~~v~VvGgG~~a~e~a~~l~~~~~~~~~~~~~~~~~~~~v~~~~~~~~------------l~~~-----~~~~~~~~~~~ 293 (351)
.+|+|||||+.|+.+|..|.+.+ .+|+++++... .+.+ ..++...+.+.
T Consensus 15 ~~vvIIG~G~aGl~aA~~l~~~g--------------~~v~lie~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 80 (335)
T 2a87_A 15 RDVIVIGSGPAGYTAALYAARAQ--------------LAPLVFEGTSFGGALMTTTDVENYPGFRNGITGPELMDEMREQ 80 (335)
T ss_dssp EEEEEECCHHHHHHHHHHHHHTT--------------CCCEEECCSSCSCGGGSCSCBCCSTTCTTCBCHHHHHHHHHHH
T ss_pred CCEEEECCCHHHHHHHHHHHhCC--------------CeEEEEecCCCCCceeccchhhhcCCCCCCCCHHHHHHHHHHH
Confidence 48999999999999999998876 78999986421 1122 24666777778
Q ss_pred hhhcCcEEEcCeEEEEeC-C--eE-EecCCcEEeccEEEEecCCCCc
Q 018704 294 LSKSGVRLVRGIVKDVDS-Q--KL-ILNDGTEVPYGLLVWSTGVGPS 336 (351)
Q Consensus 294 l~~~gV~~~~~~v~~v~~-~--~v-~~~~g~~~~~D~vi~a~G~~p~ 336 (351)
+++.|++++.+++.+++. + .+ .+.+|+++.+|.||+|+|..|.
T Consensus 81 ~~~~~v~~~~~~v~~i~~~~~~~v~~~~~g~~~~~d~lviAtG~~~~ 127 (335)
T 2a87_A 81 ALRFGADLRMEDVESVSLHGPLKSVVTADGQTHRARAVILAMGAAAR 127 (335)
T ss_dssp HHHTTCEEECCCEEEEECSSSSEEEEETTSCEEEEEEEEECCCEEEC
T ss_pred HHHcCCEEEEeeEEEEEeCCcEEEEEeCCCCEEEeCEEEECCCCCcc
Confidence 888899999998877764 2 46 6778888999999999998776
No 191
>2bc0_A NADH oxidase; flavoprotein, pyridine nucleotide disulfide oxidoreductase, C(4A)-peroxyflavin, crystallography, conformational dynamics; HET: FAD; 2.00A {Streptococcus pyogenes} PDB: 2bcp_A* 2bc1_A*
Probab=98.31 E-value=1.5e-06 Score=83.00 Aligned_cols=101 Identities=18% Similarity=0.262 Sum_probs=69.2
Q ss_pred CCCcEEEECCchhHHHHHHhhhccCceEEEEcCCCccccchhhhhhhcccccccccccchhccchhhhcCCCeEEEEE-E
Q 018704 61 EKPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRNHMVFTPLLASTCVGTLEFRSVAEPIARIQPAISREPGSYFFLS-H 139 (351)
Q Consensus 61 ~~~~VvIIG~G~aGl~aA~~L~~~g~~v~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 139 (351)
...+|+|||||+.|+.+|..|++.|.+|+|+++.+.+.-. .+...+...........++.++.. .
T Consensus 193 ~~~~vvVIGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l~~--------------~~~~~~~~~l~~~l~~~GV~i~~~~~ 258 (490)
T 2bc0_A 193 DIKRVAVVGAGYIGVELAEAFQRKGKEVVLIDVVDTCLAG--------------YYDRDLTDLMAKNMEEHGIQLAFGET 258 (490)
T ss_dssp TCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSTTTT--------------TSCHHHHHHHHHHHHTTTCEEEETCC
T ss_pred CCceEEEECCCHHHHHHHHHHHHCCCeEEEEEcccchhhh--------------HHHHHHHHHHHHHHHhCCeEEEeCCE
Confidence 3578999999999999999999999999999997753210 011122222223344557777664 7
Q ss_pred eeeEeCCCCEEEEEeecCccccCCCceeEeeccEEEEecCCCcCCC
Q 018704 140 CAGIDTDNHVVHCETVTDELRTLEPWKFKISYDKLVIALGAEASTF 185 (351)
Q Consensus 140 v~~i~~~~~~v~~~~~~~~~~~~~~~~~~~~~d~lviAtG~~p~~p 185 (351)
|+.++.+.+...+.. ++. ++.+|.||+|+|..|...
T Consensus 259 v~~i~~~~~v~~v~~--~g~--------~i~~D~Vi~a~G~~p~~~ 294 (490)
T 2bc0_A 259 VKEVAGNGKVEKIIT--DKN--------EYDVDMVILAVGFRPNTT 294 (490)
T ss_dssp EEEEECSSSCCEEEE--SSC--------EEECSEEEECCCEEECCG
T ss_pred EEEEEcCCcEEEEEE--CCc--------EEECCEEEECCCCCcChH
Confidence 888876443222222 455 899999999999887764
No 192
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum}
Probab=98.30 E-value=3e-06 Score=75.98 Aligned_cols=91 Identities=12% Similarity=0.147 Sum_probs=70.7
Q ss_pred CeEEEECCChHHHHHHHHHHHHHHHHHHhhhcCCCCccEEEEEeCCCC------------CCCC----cHHHHHHHHHHh
Q 018704 231 LHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEI------------LSSF----DDRLRHYATTQL 294 (351)
Q Consensus 231 ~~v~VvGgG~~a~e~a~~l~~~~~~~~~~~~~~~~~~~~v~~~~~~~~------------l~~~----~~~~~~~~~~~l 294 (351)
.+|+|||||+.|+.+|..|.+.+ .+|+++++... .+.+ ...+.+.+.+.+
T Consensus 17 ~dvvIIG~G~aGl~aA~~l~~~g--------------~~v~lie~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (319)
T 3cty_A 17 FDVVIVGAGAAGFSAAVYAARSG--------------FSVAILDKAVAGGLTAEAPLVENYLGFKSIVGSELAKLFADHA 82 (319)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTT--------------CCEEEEESSSTTGGGGGCSCBCCBTTBSSBCHHHHHHHHHHHH
T ss_pred CcEEEECcCHHHHHHHHHHHhCC--------------CcEEEEeCCCCCccccccchhhhcCCCcccCHHHHHHHHHHHH
Confidence 48999999999999999999876 88999998531 1221 245666777788
Q ss_pred hhcCcEEEcCeEEEEe--CC--eEEecCCcEEeccEEEEecCCCCc
Q 018704 295 SKSGVRLVRGIVKDVD--SQ--KLILNDGTEVPYGLLVWSTGVGPS 336 (351)
Q Consensus 295 ~~~gV~~~~~~v~~v~--~~--~v~~~~g~~~~~D~vi~a~G~~p~ 336 (351)
++.|++++.+++.+++ .+ .|.+ ++.++.+|.||+|+|.+|.
T Consensus 83 ~~~~v~~~~~~v~~i~~~~~~~~v~~-~~~~~~~~~li~AtG~~~~ 127 (319)
T 3cty_A 83 ANYAKIREGVEVRSIKKTQGGFDIET-NDDTYHAKYVIITTGTTHK 127 (319)
T ss_dssp HTTSEEEETCCEEEEEEETTEEEEEE-SSSEEEEEEEEECCCEEEC
T ss_pred HHcCCEEEEeeEEEEEEeCCEEEEEE-CCCEEEeCEEEECCCCCcc
Confidence 8889999997788775 34 3444 6678999999999998776
No 193
>2gqf_A Hypothetical protein HI0933; structural genomics, FAD-utilizing protein, flavoprotein, PS protein structure initiative; HET: FAD; 2.70A {Haemophilus influenzae} SCOP: c.3.1.8 e.74.1.1
Probab=98.30 E-value=4.1e-06 Score=77.89 Aligned_cols=90 Identities=17% Similarity=0.276 Sum_probs=68.8
Q ss_pred eEEEECCChHHHHHHHHHHHHHHHHHHhhhcCCCCccEEEEEeCCCCCC------------------C------------
Q 018704 232 HCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEILS------------------S------------ 281 (351)
Q Consensus 232 ~v~VvGgG~~a~e~a~~l~~~~~~~~~~~~~~~~~~~~v~~~~~~~~l~------------------~------------ 281 (351)
+|+|||||.+|+.+|..+++.| .+|+++++.+.+. .
T Consensus 6 dViIIGgG~aGl~aA~~la~~G--------------~~V~vlEk~~~~g~~~~~sggg~cn~~~~~~~~~~~~~~~~~~~ 71 (401)
T 2gqf_A 6 ENIIIGAGAAGLFCAAQLAKLG--------------KSVTVFDNGKKIGRKILMSGGGFCNFTNLEVTPAHYLSQNPHFV 71 (401)
T ss_dssp SEEEECCSHHHHHHHHHHHHTT--------------CCEEEECSSSSSCHHHHHGGGGTCCCEESSCCGGGEECSCTTST
T ss_pred CEEEECCcHHHHHHHHHHHhCC--------------CCEEEEeCCCCCchhcEEcCCCeEEccCCccCHHHhccCCHHHH
Confidence 7999999999999999999876 7899988864210 0
Q ss_pred -----------------------------------CcHHHHHHHHHHhhhcCcEEEcCe-EEEEe-C-----Ce--EEec
Q 018704 282 -----------------------------------FDDRLRHYATTQLSKSGVRLVRGI-VKDVD-S-----QK--LILN 317 (351)
Q Consensus 282 -----------------------------------~~~~~~~~~~~~l~~~gV~~~~~~-v~~v~-~-----~~--v~~~ 317 (351)
....+.+.+.+.+++.||+++.+. |+++. . ++ |.+.
T Consensus 72 ~~~l~~~~~~~~~~~~~~~Gi~~~~~~~g~~~p~~~~~~l~~~L~~~~~~~Gv~i~~~~~v~~i~~~~~g~~~~~~v~~~ 151 (401)
T 2gqf_A 72 KSALARYTNWDFISLVAEQGITYHEKELGQLFCDEGAEQIVEMLKSECDKYGAKILLRSEVSQVERIQNDEKVRFVLQVN 151 (401)
T ss_dssp HHHHHHSCHHHHHHHHHHTTCCEEECSTTEEEETTCTHHHHHHHHHHHHHHTCEEECSCCEEEEEECCSCSSCCEEEEET
T ss_pred HHHHHhCCHHHHHHHHHhCCCceEECcCCEEccCCCHHHHHHHHHHHHHHCCCEEEeCCEEEEEEcccCcCCCeEEEEEC
Confidence 123444567777888899999995 88875 2 32 4455
Q ss_pred CCcEEeccEEEEecCCCCc
Q 018704 318 DGTEVPYGLLVWSTGVGPS 336 (351)
Q Consensus 318 ~g~~~~~D~vi~a~G~~p~ 336 (351)
+| ++.+|.||+|+|..+.
T Consensus 152 ~g-~i~ad~VVlAtG~~s~ 169 (401)
T 2gqf_A 152 ST-QWQCKNLIVATGGLSM 169 (401)
T ss_dssp TE-EEEESEEEECCCCSSC
T ss_pred CC-EEECCEEEECCCCccC
Confidence 55 7999999999999883
No 194
>4fk1_A Putative thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE FAD; 2.40A {Bacillus anthracis} PDB: 4fk1_C*
Probab=98.30 E-value=2.8e-06 Score=75.78 Aligned_cols=91 Identities=19% Similarity=0.297 Sum_probs=66.5
Q ss_pred eEEEECCChHHHHHHHHHHHHHHHHHHhhhcCCCCccEEEEEeCCCC----C---CC-------CcHHHHHHHHHHhhhc
Q 018704 232 HCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEI----L---SS-------FDDRLRHYATTQLSKS 297 (351)
Q Consensus 232 ~v~VvGgG~~a~e~a~~l~~~~~~~~~~~~~~~~~~~~v~~~~~~~~----l---~~-------~~~~~~~~~~~~l~~~ 297 (351)
.|+|||||+.|+.+|..+++.+ .+|++++++.. . +. .++++.+...+.+.+.
T Consensus 8 DVvIIGaGpAGlsAA~~lar~g--------------~~v~lie~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 73 (304)
T 4fk1_A 8 DCAVIGAGPAGLNASLVLGRAR--------------KQIALFDNNTNRNRVTQNSHGFITRDGIKPEEFKEIGLNEVMKY 73 (304)
T ss_dssp EEEEECCSHHHHHHHHHHHHTT--------------CCEEEEECSCCGGGGSSCBCCSTTCTTBCHHHHHHHHHHHHTTS
T ss_pred CEEEECCCHHHHHHHHHHHHCC--------------CCEEEEeCCCCCCeeeeecCCccCCCCCCHHHHHHHHHHHHHhc
Confidence 7999999999999999998877 89999998531 0 11 1244555544544444
Q ss_pred -CcEEEcCeEEEEeC---C--eEEecCCcEEeccEEEEecCCCCc
Q 018704 298 -GVRLVRGIVKDVDS---Q--KLILNDGTEVPYGLLVWSTGVGPS 336 (351)
Q Consensus 298 -gV~~~~~~v~~v~~---~--~v~~~~g~~~~~D~vi~a~G~~p~ 336 (351)
++.++.+.+..+.. + .+.+.+|+++++|.||+|||.+|.
T Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~v~~~~g~~~~a~~liiATGs~p~ 118 (304)
T 4fk1_A 74 PSVHYYEKTVVMITKQSTGLFEIVTKDHTKYLAERVLLATGMQEE 118 (304)
T ss_dssp TTEEEEECCEEEEEECTTSCEEEEETTCCEEEEEEEEECCCCEEE
T ss_pred CCEEEEeeEEEEeeecCCCcEEEEECCCCEEEeCEEEEccCCccc
Confidence 56777776555432 1 577889999999999999998876
No 195
>3kd9_A Coenzyme A disulfide reductase; PSI-II, NYSGXRC, oxidoreductase, structural genomics structure initiative; 2.75A {Pyrococcus horikoshii}
Probab=98.29 E-value=2.4e-06 Score=80.62 Aligned_cols=94 Identities=27% Similarity=0.466 Sum_probs=65.8
Q ss_pred CeEEEECCChHHHHHHHHHHHHHHHHHHhhhcCCCCccEEEEEeCCCCCCC----Cc---------HHHHHHHHHHh-hh
Q 018704 231 LHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEILSS----FD---------DRLRHYATTQL-SK 296 (351)
Q Consensus 231 ~~v~VvGgG~~a~e~a~~l~~~~~~~~~~~~~~~~~~~~v~~~~~~~~l~~----~~---------~~~~~~~~~~l-~~ 296 (351)
++|+|||||..|+.+|..|.+.+ ++.+|+++++.+.... ++ ..+.....+.+ ++
T Consensus 4 ~~VvIIGgG~aGl~aA~~L~~~~------------~~~~V~vie~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~ 71 (449)
T 3kd9_A 4 KKVVIIGGGAAGMSAASRVKRLK------------PEWDVKVFEATEWVSHAPCGIPYVVEGLSTPDKLMYYPPEVFIKK 71 (449)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHC------------TTSEEEEECSSSCCC------------------------CTHHHH
T ss_pred CcEEEECCcHHHHHHHHHHHHhC------------cCCCEEEEECCCccccCCcCCccccCCCCCHHHhhhcCHHHHHHh
Confidence 48999999999999999998762 2379999999753211 11 11111122223 57
Q ss_pred cCcEEEcC-eEEEEeCC--eEEecCC-cEEeccEEEEecCCCCc
Q 018704 297 SGVRLVRG-IVKDVDSQ--KLILNDG-TEVPYGLLVWSTGVGPS 336 (351)
Q Consensus 297 ~gV~~~~~-~v~~v~~~--~v~~~~g-~~~~~D~vi~a~G~~p~ 336 (351)
.||+++.+ +|.+++.+ .+.+.+| .++.+|.||+|||.+|.
T Consensus 72 ~gi~v~~~~~v~~i~~~~~~v~~~~g~~~~~~d~lviAtG~~p~ 115 (449)
T 3kd9_A 72 RGIDLHLNAEVIEVDTGYVRVRENGGEKSYEWDYLVFANGASPQ 115 (449)
T ss_dssp TTCEEETTCEEEEECSSEEEEECSSSEEEEECSEEEECCCEEEC
T ss_pred cCcEEEecCEEEEEecCCCEEEECCceEEEEcCEEEECCCCCCC
Confidence 89999999 69999765 4555566 47999999999998876
No 196
>1zmd_A Dihydrolipoyl dehydrogenase; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha- ketoglutarate dehydrogenase; HET: FAD NAI; 2.08A {Homo sapiens} PDB: 1zmc_A* 2f5z_A* 1zy8_A* 3rnm_A*
Probab=98.29 E-value=1.4e-06 Score=82.90 Aligned_cols=102 Identities=21% Similarity=0.215 Sum_probs=69.1
Q ss_pred CCcEEEECCchhHHHHHHhhhccCceEEEEcCCCccccchhhhhhhcccccccccccchhccchhhhcCCCeEEEE-EEe
Q 018704 62 KPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRNHMVFTPLLASTCVGTLEFRSVAEPIARIQPAISREPGSYFFL-SHC 140 (351)
Q Consensus 62 ~~~VvIIG~G~aGl~aA~~L~~~g~~v~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~v 140 (351)
..+|+|||||+.|+.+|..|++.|.+|+++++.+.+.-. .+...+...........++.++. .+|
T Consensus 178 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~--------------~~~~~~~~~l~~~l~~~Gv~i~~~~~v 243 (474)
T 1zmd_A 178 PEKMVVIGAGVIGVELGSVWQRLGADVTAVEFLGHVGGV--------------GIDMEISKNFQRILQKQGFKFKLNTKV 243 (474)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSCS--------------SCCHHHHHHHHHHHHHTTCEEECSEEE
T ss_pred CceEEEECCCHHHHHHHHHHHHcCCEEEEEeccCccCCc--------------ccCHHHHHHHHHHHHHCCCEEEeCceE
Confidence 478999999999999999999999999999997763210 01111222222223344677665 478
Q ss_pred eeEeCCCCE-EEEEe----ecCccccCCCceeEeeccEEEEecCCCcCCC
Q 018704 141 AGIDTDNHV-VHCET----VTDELRTLEPWKFKISYDKLVIALGAEASTF 185 (351)
Q Consensus 141 ~~i~~~~~~-v~~~~----~~~~~~~~~~~~~~~~~d~lviAtG~~p~~p 185 (351)
+.++.+.+. +.+.. ..++. ++.+|.||+|+|..|+..
T Consensus 244 ~~i~~~~~~~~~v~~~~~~~~~~~--------~i~~D~vv~a~G~~p~~~ 285 (474)
T 1zmd_A 244 TGATKKSDGKIDVSIEAASGGKAE--------VITCDVLLVCIGRRPFTK 285 (474)
T ss_dssp EEEEECTTSCEEEEEEETTSCCCE--------EEEESEEEECSCEEECCT
T ss_pred EEEEEcCCceEEEEEEecCCCCce--------EEEcCEEEECcCCCcCCC
Confidence 888766543 44432 12333 799999999999988764
No 197
>4b1b_A TRXR, thioredoxin reductase; oxidoreductase, FAD, NADPH, thiol-mediated redox metabolism, pyridine nucleotide-disulfide oxidoreductase; HET: FAD; 2.90A {Plasmodium falciparum}
Probab=98.29 E-value=1.2e-06 Score=84.37 Aligned_cols=100 Identities=16% Similarity=0.177 Sum_probs=70.7
Q ss_pred CCcEEEECCchhHHHHHHhhhccCceEEEEcCCCccccchhhhhhhcccccccccccchhccchhhhcCCCeEEEEE-Ee
Q 018704 62 KPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRNHMVFTPLLASTCVGTLEFRSVAEPIARIQPAISREPGSYFFLS-HC 140 (351)
Q Consensus 62 ~~~VvIIG~G~aGl~aA~~L~~~g~~v~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~v 140 (351)
+.+++|||||+.|+..|..+++.|.+|||+++...+. . ....+...........++.++.. .+
T Consensus 223 P~~lvIIGgG~IGlE~A~~~~~lG~~VTii~~~~~L~------~----------~D~ei~~~l~~~l~~~gi~~~~~~~v 286 (542)
T 4b1b_A 223 PGKTLVVGASYVALECSGFLNSLGYDVTVAVRSIVLR------G----------FDQQCAVKVKLYMEEQGVMFKNGILP 286 (542)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHHTCCEEEEESSCSST------T----------SCHHHHHHHHHHHHHTTCEEEETCCE
T ss_pred CceEEEECCCHHHHHHHHHHHhcCCeEEEeccccccc------c----------cchhHHHHHHHHHHhhcceeecceEE
Confidence 4789999999999999999999999999998754321 0 11222222233344456766554 67
Q ss_pred eeEeCCCCEEEEEeecCccccCCCceeEeeccEEEEecCCCcCCCC
Q 018704 141 AGIDTDNHVVHCETVTDELRTLEPWKFKISYDKLVIALGAEASTFG 186 (351)
Q Consensus 141 ~~i~~~~~~v~~~~~~~~~~~~~~~~~~~~~d~lviAtG~~p~~p~ 186 (351)
..+......+.+.. .++. .+.+|.|++|+|-.|+...
T Consensus 287 ~~~~~~~~~~~v~~-~~~~--------~~~~D~vLvAvGR~Pnt~~ 323 (542)
T 4b1b_A 287 KKLTKMDDKILVEF-SDKT--------SELYDTVLYAIGRKGDIDG 323 (542)
T ss_dssp EEEEEETTEEEEEE-TTSC--------EEEESEEEECSCEEESCGG
T ss_pred EEEEecCCeEEEEE-cCCC--------eEEEEEEEEcccccCCccc
Confidence 77777777776644 3454 7889999999999888753
No 198
>1trb_A Thioredoxin reductase; oxidoreductase(flavoenzyme); HET: FAD; 2.00A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 PDB: 1cl0_A* 1f6m_A* 1tdf_A* 1tde_A*
Probab=98.29 E-value=2.2e-06 Score=76.80 Aligned_cols=92 Identities=17% Similarity=0.191 Sum_probs=72.0
Q ss_pred CeEEEECCChHHHHHHHHHHHHHHHHHHhhhcCCCCccEEEEEeCCCC------------CCCC-----cHHHHHHHHHH
Q 018704 231 LHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEI------------LSSF-----DDRLRHYATTQ 293 (351)
Q Consensus 231 ~~v~VvGgG~~a~e~a~~l~~~~~~~~~~~~~~~~~~~~v~~~~~~~~------------l~~~-----~~~~~~~~~~~ 293 (351)
.+|+|||||+.|+.+|..|.+.+ .+|+++++... .+.+ ...+.+.+.+.
T Consensus 6 ~~vvIIG~G~aGl~aA~~l~~~g--------------~~v~lie~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 71 (320)
T 1trb_A 6 SKLLILGSGPAGYTAAVYAARAN--------------LQPVLITGMEKGGQLTTTTEVENWPGDPNDLTGPLLMERMHEH 71 (320)
T ss_dssp EEEEEECCSHHHHHHHHHHHTTT--------------CCCEEECCSSTTGGGGGCSBCCCSTTCCSSCBHHHHHHHHHHH
T ss_pred CCEEEECcCHHHHHHHHHHHHCC--------------CcEEEEccCCCCceEecchhhhhCCCCCCCCCHHHHHHHHHHH
Confidence 48999999999999999998766 78999986421 1122 24666777778
Q ss_pred hhhcCcEEEcCeEEEEeC--CeEE-ecCCcEEeccEEEEecCCCCc
Q 018704 294 LSKSGVRLVRGIVKDVDS--QKLI-LNDGTEVPYGLLVWSTGVGPS 336 (351)
Q Consensus 294 l~~~gV~~~~~~v~~v~~--~~v~-~~~g~~~~~D~vi~a~G~~p~ 336 (351)
+++.|++++.+++..++. +.+. +.+|.++.+|.||+|+|.+|.
T Consensus 72 ~~~~~~~~~~~~v~~i~~~~~~~~v~~~~~~~~~~~lv~AtG~~~~ 117 (320)
T 1trb_A 72 ATKFETEIIFDHINKVDLQNRPFRLNGDNGEYTCDALIIATGASAR 117 (320)
T ss_dssp HHHTTCEEECCCEEEEECSSSSEEEEESSCEEEEEEEEECCCEEEC
T ss_pred HHHCCCEEEEeeeeEEEecCCEEEEEeCCCEEEcCEEEECCCCCcC
Confidence 888999999998888764 3333 567888999999999998766
No 199
>1ges_A Glutathione reductase; oxidoreductase(flavoenzyme); HET: FAD; 1.74A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1geu_A* 1ger_A* 1get_A*
Probab=98.29 E-value=1e-06 Score=83.36 Aligned_cols=100 Identities=17% Similarity=0.139 Sum_probs=68.0
Q ss_pred CCcEEEECCchhHHHHHHhhhccCceEEEEcCCCccccchhhhhhhcccccccccccchhccchhhhcCCCeEEEEE-Ee
Q 018704 62 KPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRNHMVFTPLLASTCVGTLEFRSVAEPIARIQPAISREPGSYFFLS-HC 140 (351)
Q Consensus 62 ~~~VvIIG~G~aGl~aA~~L~~~g~~v~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~v 140 (351)
..+|+|||||+.|+.+|..|++.|.+|+|+|+.+...- . +...+.+.........++.++.. +|
T Consensus 167 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~--~-------------~~~~~~~~l~~~l~~~Gv~i~~~~~v 231 (450)
T 1ges_A 167 PERVAVVGAGYIGVELGGVINGLGAKTHLFEMFDAPLP--S-------------FDPMISETLVEVMNAEGPQLHTNAIP 231 (450)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSST--T-------------SCHHHHHHHHHHHHHHSCEEECSCCE
T ss_pred CCeEEEECCCHHHHHHHHHHHhcCCEEEEEEeCCchhh--h-------------hhHHHHHHHHHHHHHCCCEEEeCCEE
Confidence 46899999999999999999999999999999765320 0 01111111112222346666654 67
Q ss_pred eeEeCCCC-EEEEEeecCccccCCCceeEeeccEEEEecCCCcCCC
Q 018704 141 AGIDTDNH-VVHCETVTDELRTLEPWKFKISYDKLVIALGAEASTF 185 (351)
Q Consensus 141 ~~i~~~~~-~v~~~~~~~~~~~~~~~~~~~~~d~lviAtG~~p~~p 185 (351)
..++.+.. .+.+.. .+++ .+.+|.||+|+|..|+..
T Consensus 232 ~~i~~~~~~~~~v~~-~~g~--------~i~~D~vv~a~G~~p~~~ 268 (450)
T 1ges_A 232 KAVVKNTDGSLTLEL-EDGR--------SETVDCLIWAIGREPAND 268 (450)
T ss_dssp EEEEECTTSCEEEEE-TTSC--------EEEESEEEECSCEEESCT
T ss_pred EEEEEeCCcEEEEEE-CCCc--------EEEcCEEEECCCCCcCCC
Confidence 88876532 233332 4565 899999999999988764
No 200
>4a5l_A Thioredoxin reductase; oxidoreductase, redox metabolism, oxidative stress; HET: NDP FAD; 1.66A {Entamoeba histolytica} PDB: 4a65_A*
Probab=98.28 E-value=3.4e-06 Score=75.35 Aligned_cols=91 Identities=23% Similarity=0.315 Sum_probs=71.8
Q ss_pred eEEEECCChHHHHHHHHHHHHHHHHHHhhhcCCCCccEEEEEeCCCC----C-------------CCC-----cHHHHHH
Q 018704 232 HCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEI----L-------------SSF-----DDRLRHY 289 (351)
Q Consensus 232 ~v~VvGgG~~a~e~a~~l~~~~~~~~~~~~~~~~~~~~v~~~~~~~~----l-------------~~~-----~~~~~~~ 289 (351)
.|+|||||+.|+.+|..+++.+ .+|+++++... + +.+ ..++...
T Consensus 6 DvvIIG~GpAGl~AA~~la~~g--------------~~v~liE~~~~gg~~~~G~~~~~~~i~~~~g~~~~i~~~~l~~~ 71 (314)
T 4a5l_A 6 DVVIIGSGPAAHTAAIYLGRSS--------------LKPVMYEGFMAGGVAAGGQLTTTTIIENFPGFPNGIDGNELMMN 71 (314)
T ss_dssp EEEEECCSHHHHHHHHHHHHTT--------------CCCEEECCSSGGGCCTTCGGGGSSEECCSTTCTTCEEHHHHHHH
T ss_pred cEEEECCCHHHHHHHHHHHHCC--------------CCEEEEecCCCCCcccCCCcCChHHhhhccCCcccCCHHHHHHH
Confidence 7999999999999999999877 88999987531 1 111 2456777
Q ss_pred HHHHhhhcCcEEEcCeEEEEeCC----eEEecCCcEEeccEEEEecCCCCc
Q 018704 290 ATTQLSKSGVRLVRGIVKDVDSQ----KLILNDGTEVPYGLLVWSTGVGPS 336 (351)
Q Consensus 290 ~~~~l~~~gV~~~~~~v~~v~~~----~v~~~~g~~~~~D~vi~a~G~~p~ 336 (351)
+.+.+++.++++....+.....+ .+.+.++.++.+|.||+|||.+|.
T Consensus 72 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~liiATG~~~~ 122 (314)
T 4a5l_A 72 MRTQSEKYGTTIITETIDHVDFSTQPFKLFTEEGKEVLTKSVIIATGATAK 122 (314)
T ss_dssp HHHHHHHTTCEEECCCEEEEECSSSSEEEEETTCCEEEEEEEEECCCEEEC
T ss_pred HHHHHhhcCcEEEEeEEEEeecCCCceEEEECCCeEEEEeEEEEccccccc
Confidence 78888899999998876655432 456678889999999999998776
No 201
>2a8x_A Dihydrolipoyl dehydrogenase, E3 component of alpha; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha keto acid dehydrogenase; HET: FAD; 2.40A {Mycobacterium tuberculosis} PDB: 3ii4_A*
Probab=98.27 E-value=1.5e-06 Score=82.51 Aligned_cols=104 Identities=13% Similarity=0.147 Sum_probs=69.1
Q ss_pred CCcEEEECCchhHHHHHHhhhccCceEEEEcCCCccccchhhhhhhcccccccccccchhccchhhhcCCCeEEEE-EEe
Q 018704 62 KPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRNHMVFTPLLASTCVGTLEFRSVAEPIARIQPAISREPGSYFFL-SHC 140 (351)
Q Consensus 62 ~~~VvIIG~G~aGl~aA~~L~~~g~~v~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~v 140 (351)
..+|+|||||+.|+.+|..|++.|.+|+|+++.+.+.- . +...+...........++.++. ..|
T Consensus 171 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~--~-------------~~~~~~~~l~~~l~~~gv~i~~~~~v 235 (464)
T 2a8x_A 171 PKSIIIAGAGAIGMEFGYVLKNYGVDVTIVEFLPRALP--N-------------EDADVSKEIEKQFKKLGVTILTATKV 235 (464)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSST--T-------------SCHHHHHHHHHHHHHHTCEEECSCEE
T ss_pred CCeEEEECCcHHHHHHHHHHHHcCCeEEEEEcCCcccc--c-------------cCHHHHHHHHHHHHHcCCEEEeCcEE
Confidence 47999999999999999999999999999999875320 0 1111111122222334666665 478
Q ss_pred eeEeCCCCEEEEEeecCccccCCCceeEeeccEEEEecCCCcCCCC
Q 018704 141 AGIDTDNHVVHCETVTDELRTLEPWKFKISYDKLVIALGAEASTFG 186 (351)
Q Consensus 141 ~~i~~~~~~v~~~~~~~~~~~~~~~~~~~~~d~lviAtG~~p~~p~ 186 (351)
..++.+...+.+....+++ ...+.+|.||+|+|..|+...
T Consensus 236 ~~i~~~~~~~~v~~~~~g~------~~~~~~D~vv~a~G~~p~~~~ 275 (464)
T 2a8x_A 236 ESIADGGSQVTVTVTKDGV------AQELKAEKVLQAIGFAPNVEG 275 (464)
T ss_dssp EEEEECSSCEEEEEESSSC------EEEEEESEEEECSCEEECCSS
T ss_pred EEEEEcCCeEEEEEEcCCc------eEEEEcCEEEECCCCCccCCC
Confidence 8887655444443222331 127899999999999887653
No 202
>3oc4_A Oxidoreductase, pyridine nucleotide-disulfide FAM; structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.60A {Enterococcus faecalis}
Probab=98.26 E-value=4.9e-06 Score=78.61 Aligned_cols=101 Identities=17% Similarity=0.157 Sum_probs=71.3
Q ss_pred CCcEEEECCchhHHHHHHhhhccCceEEEEcCCCccccchhhhhhhcccccccccccchhccchhhhcCCCeEEEE-EEe
Q 018704 62 KPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRNHMVFTPLLASTCVGTLEFRSVAEPIARIQPAISREPGSYFFL-SHC 140 (351)
Q Consensus 62 ~~~VvIIG~G~aGl~aA~~L~~~g~~v~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~v 140 (351)
..+++|||+|+.|+.+|..|++.|.+|+++++.+.+... .+...+.+.........++.++. ..|
T Consensus 147 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~--------------~~d~~~~~~l~~~l~~~GV~i~~~~~v 212 (452)
T 3oc4_A 147 SQTVAVIGAGPIGMEAIDFLVKMKKTVHVFESLENLLPK--------------YFDKEMVAEVQKSLEKQAVIFHFEETV 212 (452)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSSTT--------------TCCHHHHHHHHHHHHTTTEEEEETCCE
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCeEEEEEccCccccc--------------cCCHHHHHHHHHHHHHcCCEEEeCCEE
Confidence 478999999999999999999999999999997763210 01122222233334456888776 578
Q ss_pred eeEeCCCCEEEEEeecCccccCCCceeEeeccEEEEecCCCcCCCC
Q 018704 141 AGIDTDNHVVHCETVTDELRTLEPWKFKISYDKLVIALGAEASTFG 186 (351)
Q Consensus 141 ~~i~~~~~~v~~~~~~~~~~~~~~~~~~~~~d~lviAtG~~p~~p~ 186 (351)
..+..+...+.+.. ++. ++.+|.||+|+|..|+...
T Consensus 213 ~~i~~~~~~v~v~~--~~g--------~i~aD~Vv~A~G~~p~~~~ 248 (452)
T 3oc4_A 213 LGIEETANGIVLET--SEQ--------EISCDSGIFALNLHPQLAY 248 (452)
T ss_dssp EEEEECSSCEEEEE--SSC--------EEEESEEEECSCCBCCCSS
T ss_pred EEEEccCCeEEEEE--CCC--------EEEeCEEEECcCCCCChHH
Confidence 88875555554433 333 7899999999999887653
No 203
>1ojt_A Surface protein; redox-active center, glycolysis, oxidoreductase, NAD, flavop FAD, P64K; HET: FAD; 2.75A {Neisseria meningitidis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1bhy_A*
Probab=98.26 E-value=1.2e-06 Score=83.55 Aligned_cols=101 Identities=10% Similarity=0.118 Sum_probs=69.0
Q ss_pred CCcEEEECCchhHHHHHHhhhccCceEEEEcCCCccccchhhhhhhcccccccccccchhccchhhhcCCCeEEEEE-Ee
Q 018704 62 KPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRNHMVFTPLLASTCVGTLEFRSVAEPIARIQPAISREPGSYFFLS-HC 140 (351)
Q Consensus 62 ~~~VvIIG~G~aGl~aA~~L~~~g~~v~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~v 140 (351)
..+|+|||||+.|+.+|..|++.|.+|+|+|+.+.+.-. +...+...........++.++.. .|
T Consensus 185 ~~~vvViGgG~ig~E~A~~l~~~G~~Vtlv~~~~~~l~~---------------~~~~~~~~l~~~l~~~gV~i~~~~~v 249 (482)
T 1ojt_A 185 PGKLLIIGGGIIGLEMGTVYSTLGSRLDVVEMMDGLMQG---------------ADRDLVKVWQKQNEYRFDNIMVNTKT 249 (482)
T ss_dssp CSEEEEESCSHHHHHHHHHHHHHTCEEEEECSSSSSSTT---------------SCHHHHHHHHHHHGGGEEEEECSCEE
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCeEEEEEECCccccc---------------cCHHHHHHHHHHHHhcCCEEEECCEE
Confidence 479999999999999999999999999999997763210 11112222222233457777654 78
Q ss_pred eeEeCCCCEEEEEeec--C-ccccCCCceeEeeccEEEEecCCCcCCC
Q 018704 141 AGIDTDNHVVHCETVT--D-ELRTLEPWKFKISYDKLVIALGAEASTF 185 (351)
Q Consensus 141 ~~i~~~~~~v~~~~~~--~-~~~~~~~~~~~~~~d~lviAtG~~p~~p 185 (351)
..++.+.+.+.+...+ . ++ ++.+|.||+|+|..|+..
T Consensus 250 ~~i~~~~~~~~v~~~~~~~~g~--------~~~~D~vv~a~G~~p~~~ 289 (482)
T 1ojt_A 250 VAVEPKEDGVYVTFEGANAPKE--------PQRYDAVLVAAGRAPNGK 289 (482)
T ss_dssp EEEEEETTEEEEEEESSSCCSS--------CEEESCEEECCCEEECGG
T ss_pred EEEEEcCCeEEEEEeccCCCce--------EEEcCEEEECcCCCcCCC
Confidence 8887655544443221 1 44 688999999999988763
No 204
>2cdu_A NADPH oxidase; flavoenzyme, oxidoreductase; HET: FAD ADP; 1.8A {Lactobacillus sanfranciscensis}
Probab=98.25 E-value=2e-06 Score=81.31 Aligned_cols=101 Identities=17% Similarity=0.320 Sum_probs=68.6
Q ss_pred CCcEEEECCchhHHHHHHhhhccCceEEEEcCCCccccchhhhhhhcccccccccccchhccchhhhcCCCeEEEEE-Ee
Q 018704 62 KPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRNHMVFTPLLASTCVGTLEFRSVAEPIARIQPAISREPGSYFFLS-HC 140 (351)
Q Consensus 62 ~~~VvIIG~G~aGl~aA~~L~~~g~~v~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~v 140 (351)
..+|+|||||+.|+.+|..|++.|.+|+++++.+.+.-. .+...+...........++.++.. +|
T Consensus 149 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~--------------~~~~~~~~~l~~~l~~~Gv~i~~~~~v 214 (452)
T 2cdu_A 149 AKTITIIGSGYIGAELAEAYSNQNYNVNLIDGHERVLYK--------------YFDKEFTDILAKDYEAHGVNLVLGSKV 214 (452)
T ss_dssp CSEEEEECCSHHHHHHHHHHHTTTCEEEEEESSSSTTTT--------------TSCHHHHHHHHHHHHHTTCEEEESSCE
T ss_pred CCeEEEECcCHHHHHHHHHHHhcCCEEEEEEcCCchhhh--------------hhhhhHHHHHHHHHHHCCCEEEcCCee
Confidence 468999999999999999999999999999987753210 011112222222233457777654 78
Q ss_pred eeEeCCCCEEEEEeecCccccCCCceeEeeccEEEEecCCCcCCC
Q 018704 141 AGIDTDNHVVHCETVTDELRTLEPWKFKISYDKLVIALGAEASTF 185 (351)
Q Consensus 141 ~~i~~~~~~v~~~~~~~~~~~~~~~~~~~~~d~lviAtG~~p~~p 185 (351)
..++.+...+..... ++. ++.+|.||+|+|..|+..
T Consensus 215 ~~i~~~~~~v~~v~~-~g~--------~i~~D~vv~a~G~~p~~~ 250 (452)
T 2cdu_A 215 AAFEEVDDEIITKTL-DGK--------EIKSDIAILCIGFRPNTE 250 (452)
T ss_dssp EEEEEETTEEEEEET-TSC--------EEEESEEEECCCEEECCG
T ss_pred EEEEcCCCeEEEEEe-CCC--------EEECCEEEECcCCCCCHH
Confidence 888763444432122 455 899999999999987754
No 205
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=98.24 E-value=3.8e-06 Score=80.84 Aligned_cols=92 Identities=15% Similarity=0.216 Sum_probs=73.5
Q ss_pred CeEEEECCChHHHHHHHHHHHHHHHHHHhhhcCCCCccEEEEEeCC---CCC--------C----CCcHHHHHHHHHHhh
Q 018704 231 LHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN---EIL--------S----SFDDRLRHYATTQLS 295 (351)
Q Consensus 231 ~~v~VvGgG~~a~e~a~~l~~~~~~~~~~~~~~~~~~~~v~~~~~~---~~l--------~----~~~~~~~~~~~~~l~ 295 (351)
.+|+|||||+.|+.+|..|++.| .+|+++++. .+. . ...+.+...+.+.++
T Consensus 213 ~dVvIIGgG~AGl~aA~~la~~G--------------~~v~lie~~~GG~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~ 278 (521)
T 1hyu_A 213 YDVLIVGSGPAGAAAAVYSARKG--------------IRTGLMGERFGGQVLDTVDIENYISVPKTEGQKLAGALKAHVS 278 (521)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTT--------------CCEEEECSSTTGGGTTCSCBCCBTTBSSBCHHHHHHHHHHHHH
T ss_pred ccEEEECCcHHHHHHHHHHHhCC--------------CeEEEEECCCCCcccccccccccCCCCCCCHHHHHHHHHHHHH
Confidence 48999999999999999999876 889999763 111 0 112567777888888
Q ss_pred hcCcEEEcC-eEEEEeC-------CeEEecCCcEEeccEEEEecCCCCc
Q 018704 296 KSGVRLVRG-IVKDVDS-------QKLILNDGTEVPYGLLVWSTGVGPS 336 (351)
Q Consensus 296 ~~gV~~~~~-~v~~v~~-------~~v~~~~g~~~~~D~vi~a~G~~p~ 336 (351)
+.||+++.+ +|..++. ..|.+.+|.++.+|.||+|+|.+|.
T Consensus 279 ~~gv~v~~~~~v~~i~~~~~~~~~~~V~~~~g~~~~~d~vVlAtG~~~~ 327 (521)
T 1hyu_A 279 DYDVDVIDSQSASKLVPAATEGGLHQIETASGAVLKARSIIIATGAKWR 327 (521)
T ss_dssp TSCEEEECSCCEEEEECCSSTTSCEEEEETTSCEEEEEEEEECCCEEEC
T ss_pred HcCCEEEcCCEEEEEEeccCCCceEEEEECCCCEEEcCEEEECCCCCcC
Confidence 999999999 5998853 2467788889999999999998765
No 206
>3ihm_A Styrene monooxygenase A; rossman fold, anti-parallel beta strands, dimer, cavity, oxidoreductase; 2.30A {Pseudomonas putida}
Probab=98.24 E-value=5.3e-07 Score=84.75 Aligned_cols=35 Identities=29% Similarity=0.312 Sum_probs=31.9
Q ss_pred CCCcEEEECCchhHHHHHHhhhccCceEEEEcCCC
Q 018704 61 EKPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRN 95 (351)
Q Consensus 61 ~~~~VvIIG~G~aGl~aA~~L~~~g~~v~vie~~~ 95 (351)
+++||+||||||+||++|..|++.|++|+|||+.+
T Consensus 21 m~~~ViIVGaGpaGl~~A~~La~~G~~V~viE~~~ 55 (430)
T 3ihm_A 21 MKKRIGIVGAGTAGLHLGLFLRQHDVDVTVYTDRK 55 (430)
T ss_dssp --CEEEEECCHHHHHHHHHHHHHTTCEEEEEESCC
T ss_pred CCCCEEEECCcHHHHHHHHHHHHCCCeEEEEcCCC
Confidence 45799999999999999999999999999999876
No 207
>1kf6_A Fumarate reductase flavoprotein; respiration, fumarate reductace, succinate dehydrogenase, CO quinol, quinone, oxidoreductase; HET: FAD HQO CE1 1PE; 2.70A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1kfy_A* 1l0v_A* 2b76_A* 3cir_A* 3p4p_A* 3p4q_A* 3p4r_A* 3p4s_A*
Probab=98.23 E-value=3.1e-06 Score=82.83 Aligned_cols=35 Identities=17% Similarity=0.235 Sum_probs=32.3
Q ss_pred CCcEEEECCchhHHHHHHhhhccC--ceEEEEcCCCc
Q 018704 62 KPRVVVLGSGWAGCRLMKGIDTSL--YDVVCVSPRNH 96 (351)
Q Consensus 62 ~~~VvIIG~G~aGl~aA~~L~~~g--~~v~vie~~~~ 96 (351)
.+||||||||+|||++|+.|++.| .+|+|||+...
T Consensus 5 ~~DVvIVG~G~AGl~aAl~la~~G~~~~V~vlEk~~~ 41 (602)
T 1kf6_A 5 QADLAIVGAGGAGLRAAIAAAQANPNAKIALISKVYP 41 (602)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHHCTTCCEEEEESSCG
T ss_pred cCCEEEECCCHHHHHHHHHHHhcCCCCcEEEEeCCCC
Confidence 479999999999999999999999 99999998753
No 208
>3ic9_A Dihydrolipoamide dehydrogenase; APC62701, colwellia psychrer 34H, structural genomics, PSI-2; HET: FAD; 2.15A {Colwellia psychrerythraea}
Probab=98.23 E-value=2.8e-06 Score=81.23 Aligned_cols=103 Identities=18% Similarity=0.140 Sum_probs=68.1
Q ss_pred CCcEEEECCchhHHHHHHhhhccCceEEEEcCCCccccchhhhhhhcccccccccccchhccchhhhcCCCeEEE-EEEe
Q 018704 62 KPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRNHMVFTPLLASTCVGTLEFRSVAEPIARIQPAISREPGSYFF-LSHC 140 (351)
Q Consensus 62 ~~~VvIIG~G~aGl~aA~~L~~~g~~v~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~v 140 (351)
..+|+|||||+.|+.+|..|++.|.+|+++++.+.+.- . +...+.+......... +.++ ...|
T Consensus 174 ~k~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l~--~-------------~d~~~~~~l~~~l~~~-V~i~~~~~v 237 (492)
T 3ic9_A 174 PKSVAVFGPGVIGLELGQALSRLGVIVKVFGRSGSVAN--L-------------QDEEMKRYAEKTFNEE-FYFDAKARV 237 (492)
T ss_dssp CSEEEEESSCHHHHHHHHHHHHTTCEEEEECCTTCCTT--C-------------CCHHHHHHHHHHHHTT-SEEETTCEE
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCeEEEEEECCcccc--c-------------CCHHHHHHHHHHHhhC-cEEEECCEE
Confidence 57999999999999999999999999999999876320 0 0111111111122222 5544 3467
Q ss_pred eeEeCCCCEEEEEee-cCccccCCCceeEeeccEEEEecCCCcCCCC
Q 018704 141 AGIDTDNHVVHCETV-TDELRTLEPWKFKISYDKLVIALGAEASTFG 186 (351)
Q Consensus 141 ~~i~~~~~~v~~~~~-~~~~~~~~~~~~~~~~d~lviAtG~~p~~p~ 186 (351)
..+..+.+.+.+... .+|+ ..++.+|.||+|+|..|+...
T Consensus 238 ~~i~~~~~~v~v~~~~~~G~------~~~i~~D~Vi~a~G~~p~~~~ 278 (492)
T 3ic9_A 238 ISTIEKEDAVEVIYFDKSGQ------KTTESFQYVLAATGRKANVDK 278 (492)
T ss_dssp EEEEECSSSEEEEEECTTCC------EEEEEESEEEECSCCEESCSS
T ss_pred EEEEEcCCEEEEEEEeCCCc------eEEEECCEEEEeeCCccCCCC
Confidence 777766555554332 2341 128999999999999887654
No 209
>1onf_A GR, grase, glutathione reductase; oxidoreductase; HET: FAD; 2.60A {Plasmodium falciparum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.23 E-value=2.6e-06 Score=81.56 Aligned_cols=100 Identities=13% Similarity=0.183 Sum_probs=68.3
Q ss_pred CCcEEEECCchhHHHHHHhhhccCceEEEEcCCCccccchhhhhhhcccccccccccchhccchhhhcCCCeEEEEE-Ee
Q 018704 62 KPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRNHMVFTPLLASTCVGTLEFRSVAEPIARIQPAISREPGSYFFLS-HC 140 (351)
Q Consensus 62 ~~~VvIIG~G~aGl~aA~~L~~~g~~v~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~v 140 (351)
..+|+|||||+.|+.+|..|++.|.+|+++++.+... +. +...+...........++.++.. +|
T Consensus 176 ~~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l--~~-------------~d~~~~~~l~~~l~~~gv~i~~~~~v 240 (500)
T 1onf_A 176 SKKIGIVGSGYIAVELINVIKRLGIDSYIFARGNRIL--RK-------------FDESVINVLENDMKKNNINIVTFADV 240 (500)
T ss_dssp CSEEEEECCSHHHHHHHHHHHTTTCEEEEECSSSSSC--TT-------------SCHHHHHHHHHHHHHTTCEEECSCCE
T ss_pred CCeEEEECChHHHHHHHHHHHHcCCeEEEEecCCccC--cc-------------cchhhHHHHHHHHHhCCCEEEECCEE
Confidence 5799999999999999999999999999999977632 00 11112222222233447776654 67
Q ss_pred eeEeCCC-CEEEEEeecCccccCCCceeE-eeccEEEEecCCCcCCC
Q 018704 141 AGIDTDN-HVVHCETVTDELRTLEPWKFK-ISYDKLVIALGAEASTF 185 (351)
Q Consensus 141 ~~i~~~~-~~v~~~~~~~~~~~~~~~~~~-~~~d~lviAtG~~p~~p 185 (351)
..++.+. ..+.+.. .+|+ . +.+|.||+|+|..|+..
T Consensus 241 ~~i~~~~~~~~~v~~-~~g~--------~~~~~D~vi~a~G~~p~~~ 278 (500)
T 1onf_A 241 VEIKKVSDKNLSIHL-SDGR--------IYEHFDHVIYCVGRSPDTE 278 (500)
T ss_dssp EEEEESSTTCEEEEE-TTSC--------EEEEESEEEECCCBCCTTT
T ss_pred EEEEEcCCceEEEEE-CCCc--------EEEECCEEEECCCCCcCCC
Confidence 7787543 2233332 4555 5 89999999999988764
No 210
>1xhc_A NADH oxidase /nitrite reductase; southe collaboratory for structural genomics, secsg, hyperthermoph protein structure initiative, PSI; HET: FAD; 2.35A {Pyrococcus furiosus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.22 E-value=7e-06 Score=75.38 Aligned_cols=90 Identities=32% Similarity=0.492 Sum_probs=66.7
Q ss_pred CeEEEECCChHHHHHHHHHHHHHHHHHHhhhcCCCCccEEEEEeCCCCCCCC------------c-HHHHHHHHHHhhhc
Q 018704 231 LHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEILSSF------------D-DRLRHYATTQLSKS 297 (351)
Q Consensus 231 ~~v~VvGgG~~a~e~a~~l~~~~~~~~~~~~~~~~~~~~v~~~~~~~~l~~~------------~-~~~~~~~~~~l~~~ 297 (351)
.+++|||||+.|+.+|..|.+. + +|++++++...... + ..+.....+.+++.
T Consensus 9 ~~vvIIGgG~AGl~aA~~l~~~--------------g-~V~lie~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~ 73 (367)
T 1xhc_A 9 SKVVIVGNGPGGFELAKQLSQT--------------Y-EVTVIDKEPVPYYSKPMLSHYIAGFIPRNRLFPYSLDWYRKR 73 (367)
T ss_dssp CEEEEECCSHHHHHHHHHHTTT--------------S-EEEEECSSSSCCCCSTTHHHHHTTSSCGGGGCSSCHHHHHHH
T ss_pred CcEEEECCcHHHHHHHHHHhhc--------------C-CEEEEECCCCCccccchhHHHHhCCCCHHHhccCCHHHHHhC
Confidence 4999999999999999998642 3 89999987532111 1 11111223456678
Q ss_pred CcEEEcCe-EEEEeCC--eEEecCCcEEeccEEEEecCCCCc
Q 018704 298 GVRLVRGI-VKDVDSQ--KLILNDGTEVPYGLLVWSTGVGPS 336 (351)
Q Consensus 298 gV~~~~~~-v~~v~~~--~v~~~~g~~~~~D~vi~a~G~~p~ 336 (351)
||+++.++ |..++.+ .|. .+|+++++|.+|+|||.+|.
T Consensus 74 ~v~~~~g~~v~~id~~~~~V~-~~g~~~~~d~lViATGs~p~ 114 (367)
T 1xhc_A 74 GIEIRLAEEAKLIDRGRKVVI-TEKGEVPYDTLVLATGARAR 114 (367)
T ss_dssp TEEEECSCCEEEEETTTTEEE-ESSCEEECSEEEECCCEEEC
T ss_pred CcEEEECCEEEEEECCCCEEE-ECCcEEECCEEEECCCCCCC
Confidence 99999994 9888764 555 67888999999999998887
No 211
>2bcg_G Secretory pathway GDP dissociation inhibitor; RABGTPase, geranylgeranylation, vesicular transport, protein transport; HET: GDP GER; 1.48A {Saccharomyces cerevisiae} SCOP: c.3.1.3 c.3.1.3 d.16.1.6 PDB: 1ukv_G* 3cpi_G 3cph_G 3cpj_G*
Probab=98.22 E-value=9.3e-07 Score=83.64 Aligned_cols=52 Identities=10% Similarity=-0.031 Sum_probs=41.7
Q ss_pred HHHHHHHHHHhhhcCcEEEcCe-EEEEe----CC---eEEecCCcEEeccEEEEecCCCCc
Q 018704 284 DRLRHYATTQLSKSGVRLVRGI-VKDVD----SQ---KLILNDGTEVPYGLLVWSTGVGPS 336 (351)
Q Consensus 284 ~~~~~~~~~~l~~~gV~~~~~~-v~~v~----~~---~v~~~~g~~~~~D~vi~a~G~~p~ 336 (351)
..+.+.+.+.+++.|+++++++ |+++. ++ +|.+ +|+++.||.||+|+|..+.
T Consensus 242 ~~l~~al~~~~~~~G~~i~~~~~V~~i~~~~~~~~~~~V~~-~g~~~~ad~VV~a~~~~~~ 301 (453)
T 2bcg_G 242 GELPQGFARLSAIYGGTYMLDTPIDEVLYKKDTGKFEGVKT-KLGTFKAPLVIADPTYFPE 301 (453)
T ss_dssp THHHHHHHHHHHHTTCEEECSCCCCEEEEETTTTEEEEEEE-TTEEEECSCEEECGGGCGG
T ss_pred HHHHHHHHHHHHHcCCEEECCCEEEEEEEECCCCeEEEEEE-CCeEEECCEEEECCCccch
Confidence 3778888889999999999995 87774 33 3444 6888999999999998875
No 212
>2r9z_A Glutathione amide reductase; NAD, FAD, substrate specificity, oxidoreductase; HET: FAD; 2.10A {Marichromatium gracile} PDB: 2rab_A*
Probab=98.21 E-value=4e-06 Score=79.49 Aligned_cols=90 Identities=22% Similarity=0.399 Sum_probs=68.1
Q ss_pred eEEEECCChHHHHHHHHHHHHHHHHHHhhhcCCCCccEEEEEeCCCCCC-------------------------------
Q 018704 232 HCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEILS------------------------------- 280 (351)
Q Consensus 232 ~v~VvGgG~~a~e~a~~l~~~~~~~~~~~~~~~~~~~~v~~~~~~~~l~------------------------------- 280 (351)
+|+|||||..|+.+|..|.+.+ .+|++++++.+..
T Consensus 6 dVvIIGgG~aGl~aA~~l~~~g--------------~~V~liE~~~~GG~~~~~gciP~k~l~~~a~~~~~~~~~~~~g~ 71 (463)
T 2r9z_A 6 DLIAIGGGSGGLAVAEKAAAFG--------------KRVALIESKALGGTCVNVGCVPKKVMWYASHLAEAVRDAPGFGV 71 (463)
T ss_dssp EEEEECCSHHHHHHHHHHHHTT--------------CCEEEEESSCTTHHHHHHSHHHHHHHHHHHHHHHHHHHGGGGTB
T ss_pred cEEEECCCHHHHHHHHHHHhCC--------------CcEEEEcCCCCCCcCcCcCchhHHHHHHHHHHHHHHhhhhhcCc
Confidence 8999999999999999998866 8999999874210
Q ss_pred -----CCcH------------HHHHHHHHHhhhcCcEEEcCeEEEEeCCeEEecCCcEEeccEEEEecCCCCc
Q 018704 281 -----SFDD------------RLRHYATTQLSKSGVRLVRGIVKDVDSQKLILNDGTEVPYGLLVWSTGVGPS 336 (351)
Q Consensus 281 -----~~~~------------~~~~~~~~~l~~~gV~~~~~~v~~v~~~~v~~~~g~~~~~D~vi~a~G~~p~ 336 (351)
..+. .+...+.+.+++.||+++.+++..++...|.+ +|+++.+|.+|+|||.+|.
T Consensus 72 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~g~~~~i~~~~v~~-~g~~~~~d~lviAtGs~p~ 143 (463)
T 2r9z_A 72 QASGGTLDWPRLVAGRDRYIGAINSFWDGYVERLGITRVDGHARFVDAHTIEV-EGQRLSADHIVIATGGRPI 143 (463)
T ss_dssp CCC---CCHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEESCEEEEETTEEEE-TTEEEEEEEEEECCCEEEC
T ss_pred ccCCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEeEEEEccCCEEEE-CCEEEEcCEEEECCCCCCC
Confidence 0010 01112233456789999999877777778888 7788999999999998876
No 213
>3k7m_X 6-hydroxy-L-nicotine oxidase; enantiomeric substrates, flavoenzymes, nicotine degradation, oxidoreductase; HET: FAD GP7; 1.95A {Arthrobacter nicotinovorans} PDB: 3k7q_X* 3ng7_X* 3ngc_X* 3nh3_X* 3nho_X* 3nk0_X* 3nk1_X* 3nk2_X* 3nn0_X* 3nn6_X* 3k7t_A*
Probab=98.21 E-value=7.1e-07 Score=83.67 Aligned_cols=36 Identities=14% Similarity=0.321 Sum_probs=33.4
Q ss_pred CcEEEECCchhHHHHHHhhhccCceEEEEcCCCccc
Q 018704 63 PRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRNHMV 98 (351)
Q Consensus 63 ~~VvIIG~G~aGl~aA~~L~~~g~~v~vie~~~~~~ 98 (351)
+||+|||||++||+||+.|++.|++|+|||+++...
T Consensus 2 ~dVvVIGaG~aGl~aA~~L~~~G~~V~vlE~~~~~G 37 (431)
T 3k7m_X 2 YDAIVVGGGFSGLKAARDLTNAGKKVLLLEGGERLG 37 (431)
T ss_dssp EEEEEECCBHHHHHHHHHHHHTTCCEEEECSSSSSB
T ss_pred CCEEEECCcHHHHHHHHHHHHcCCeEEEEecCCCcc
Confidence 699999999999999999999999999999977643
No 214
>3urh_A Dihydrolipoyl dehydrogenase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium; HET: FAD; 1.90A {Sinorhizobium meliloti}
Probab=98.20 E-value=3.5e-06 Score=80.48 Aligned_cols=104 Identities=17% Similarity=0.156 Sum_probs=70.4
Q ss_pred CCcEEEECCchhHHHHHHhhhccCceEEEEcCCCccccchhhhhhhcccccccccccchhccchhhhcCCCeEEEE-EEe
Q 018704 62 KPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRNHMVFTPLLASTCVGTLEFRSVAEPIARIQPAISREPGSYFFL-SHC 140 (351)
Q Consensus 62 ~~~VvIIG~G~aGl~aA~~L~~~g~~v~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~v 140 (351)
..+|+|||||+.|+.+|..|++.|.+|+++++.+.+.. .+...+.+.........++.++. ..|
T Consensus 198 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~---------------~~d~~~~~~l~~~l~~~gV~v~~~~~v 262 (491)
T 3urh_A 198 PASMIVVGGGVIGLELGSVWARLGAKVTVVEFLDTILG---------------GMDGEVAKQLQRMLTKQGIDFKLGAKV 262 (491)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHHTCEEEEECSSSSSSS---------------SSCHHHHHHHHHHHHHTTCEEECSEEE
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCEEEEEeccccccc---------------cCCHHHHHHHHHHHHhCCCEEEECCeE
Confidence 47899999999999999999999999999998776321 01111222222223344677665 478
Q ss_pred eeEeCCCCEEEEEee--cCccccCCCceeEeeccEEEEecCCCcCCCC
Q 018704 141 AGIDTDNHVVHCETV--TDELRTLEPWKFKISYDKLVIALGAEASTFG 186 (351)
Q Consensus 141 ~~i~~~~~~v~~~~~--~~~~~~~~~~~~~~~~d~lviAtG~~p~~p~ 186 (351)
..+..+...+.+... .+++ ...+.+|.||+|+|..|....
T Consensus 263 ~~i~~~~~~~~v~~~~~~~g~------~~~i~~D~Vi~a~G~~p~~~~ 304 (491)
T 3urh_A 263 TGAVKSGDGAKVTFEPVKGGE------ATTLDAEVVLIATGRKPSTDG 304 (491)
T ss_dssp EEEEEETTEEEEEEEETTSCC------CEEEEESEEEECCCCEECCTT
T ss_pred EEEEEeCCEEEEEEEecCCCc------eEEEEcCEEEEeeCCccCCCc
Confidence 888766665544332 1131 137899999999999887653
No 215
>3nks_A Protoporphyrinogen oxidase; FAD containing protein, PPO, variegate porphyria disease, VP oxidoreductase-oxidoreductase inhibitor complex; HET: ACJ FAD; 1.90A {Homo sapiens}
Probab=98.19 E-value=1.1e-06 Score=83.57 Aligned_cols=37 Identities=27% Similarity=0.320 Sum_probs=33.9
Q ss_pred CCcEEEECCchhHHHHHHhhhccCc--eEEEEcCCCccc
Q 018704 62 KPRVVVLGSGWAGCRLMKGIDTSLY--DVVCVSPRNHMV 98 (351)
Q Consensus 62 ~~~VvIIG~G~aGl~aA~~L~~~g~--~v~vie~~~~~~ 98 (351)
++||+|||||++||+||++|++.|. +|+|+|+++...
T Consensus 2 ~~dVvVIGaGiaGLsaA~~L~~~G~~~~V~vlEa~~~~G 40 (477)
T 3nks_A 2 GRTVVVLGGGISGLAASYHLSRAPCPPKVVLVESSERLG 40 (477)
T ss_dssp CCEEEEECCBHHHHHHHHHHHTSSSCCEEEEECSSSSSB
T ss_pred CceEEEECCcHHHHHHHHHHHhCCCCCcEEEEeCCCCCC
Confidence 3799999999999999999999999 999999987653
No 216
>2x3n_A Probable FAD-dependent monooxygenase; oxidoreductase; HET: FAD; 1.75A {Pseudomonas aeruginosa}
Probab=98.19 E-value=8.6e-06 Score=75.48 Aligned_cols=91 Identities=18% Similarity=0.219 Sum_probs=69.3
Q ss_pred eEEEECCChHHHHHHHHHHHHHHHHHHhhhcCCCCccEEEEEeCCCCCC-------------------------------
Q 018704 232 HCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEILS------------------------------- 280 (351)
Q Consensus 232 ~v~VvGgG~~a~e~a~~l~~~~~~~~~~~~~~~~~~~~v~~~~~~~~l~------------------------------- 280 (351)
+|+|||||.+|+-+|..|++.| .+|+++++.....
T Consensus 8 dVvIVGaG~aGl~~A~~L~~~G--------------~~V~viE~~~~~~~~~~~~~l~~~~~~~l~~~g~~~~~~~~~~~ 73 (399)
T 2x3n_A 8 DVLINGCGIGGAMLAYLLGRQG--------------HRVVVVEQARRERAINGADLLKPAGIRVVEAAGLLAEVTRRGGR 73 (399)
T ss_dssp EEEEECCSHHHHHHHHHHHHTT--------------CCEEEECSSCCC---CCCCEECHHHHHHHHHTTCHHHHHHTTCE
T ss_pred CEEEECcCHHHHHHHHHHHhCC--------------CcEEEEeCCCCCCccCceeeECchHHHHHHHcCcHHHHHHhCCC
Confidence 8999999999999999999866 6677776642110
Q ss_pred ------------------------------CCcHHHHHHHHHHhhhc-CcEEEcCe-EEEEeC--C----eEEecCCcEE
Q 018704 281 ------------------------------SFDDRLRHYATTQLSKS-GVRLVRGI-VKDVDS--Q----KLILNDGTEV 322 (351)
Q Consensus 281 ------------------------------~~~~~~~~~~~~~l~~~-gV~~~~~~-v~~v~~--~----~v~~~~g~~~ 322 (351)
.....+.+.+.+.+++. |++++.+. |++++. + .+.+.+|+++
T Consensus 74 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~gv~i~~~~~v~~i~~~~~~v~g~v~~~~g~~~ 153 (399)
T 2x3n_A 74 VRHELEVYHDGELLRYFNYSSVDARGYFILMPCESLRRLVLEKIDGEATVEMLFETRIEAVQRDERHAIDQVRLNDGRVL 153 (399)
T ss_dssp EECEEEEEETTEEEEEEETTSSCGGGCEEECCHHHHHHHHHHHHTTCTTEEEECSCCEEEEEECTTSCEEEEEETTSCEE
T ss_pred cceeEEEeCCCCEEEecchHHhcccCccccccHHHHHHHHHHHhhhcCCcEEEcCCEEEEEEEcCCceEEEEEECCCCEE
Confidence 00124556666777777 99999994 888864 2 5677889899
Q ss_pred eccEEEEecCCCCc
Q 018704 323 PYGLLVWSTGVGPS 336 (351)
Q Consensus 323 ~~D~vi~a~G~~p~ 336 (351)
++|.||.|+|..+.
T Consensus 154 ~ad~vV~AdG~~s~ 167 (399)
T 2x3n_A 154 RPRVVVGADGIASY 167 (399)
T ss_dssp EEEEEEECCCTTCH
T ss_pred ECCEEEECCCCChH
Confidence 99999999998876
No 217
>3o0h_A Glutathione reductase; ssgcid, structur genomics, seattle structural genomics center for infectious gluathione reductase, oxidoreductase; HET: FAD; 1.90A {Bartonella henselae}
Probab=98.19 E-value=5.1e-06 Score=79.22 Aligned_cols=91 Identities=23% Similarity=0.287 Sum_probs=71.3
Q ss_pred eEEEECCChHHHHHHHHHHHHHHHHHHhhhcCCCCccEEEEEeCCCCCCC------------------------------
Q 018704 232 HCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEILSS------------------------------ 281 (351)
Q Consensus 232 ~v~VvGgG~~a~e~a~~l~~~~~~~~~~~~~~~~~~~~v~~~~~~~~l~~------------------------------ 281 (351)
+|+|||||..|+-+|..|++.| .+|++++++.+...
T Consensus 28 DVvVIGgG~aGl~aA~~la~~G--------------~~V~liEk~~~GG~~~~~gcip~k~l~~~a~~~~~~~~~~~~g~ 93 (484)
T 3o0h_A 28 DLFVIGSGSGGVRAARLAGALG--------------KRVAIAEEYRIGGTCVIRGCVPKKLYFYASQYAQEFSKSIGFGW 93 (484)
T ss_dssp EEEEECCSHHHHHHHHHHHHTT--------------CCEEEEESSCTTHHHHHHSHHHHHHHHHHHHHHHHHHHHGGGTB
T ss_pred CEEEECcCHHHHHHHHHHHhCc--------------CEEEEEeCCCCCCceeccCccccHHHHHHHHHHHHHHHHHhCCc
Confidence 8999999999999999999877 89999998532110
Q ss_pred ------Cc------------HHHHHHHHHHhhhcCcEEEcCeEEEEeCCeEEec-CCcEEeccEEEEecCCCCc
Q 018704 282 ------FD------------DRLRHYATTQLSKSGVRLVRGIVKDVDSQKLILN-DGTEVPYGLLVWSTGVGPS 336 (351)
Q Consensus 282 ------~~------------~~~~~~~~~~l~~~gV~~~~~~v~~v~~~~v~~~-~g~~~~~D~vi~a~G~~p~ 336 (351)
++ ..+...+.+.+++.+|+++.+.+..++...+.+. ++.++.+|.+|+|||.+|.
T Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~g~~~~i~~~~v~v~~~~~~~~~d~lviAtG~~p~ 167 (484)
T 3o0h_A 94 KYADPIFNWEKLVAAKNKEISRLEGLYREGLQNSNVHIYESRAVFVDEHTLELSVTGERISAEKILIATGAKIV 167 (484)
T ss_dssp CCCCCEECHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEESCEEEEETTEEEETTTCCEEEEEEEEECCCEEEC
T ss_pred ccCCCccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeEEEEeeCCEEEEecCCeEEEeCEEEEccCCCcc
Confidence 00 0122334455677899999998888888888887 7889999999999997765
No 218
>2hqm_A GR, grase, glutathione reductase; glutathione reductase complexed with FAD, oxidoreductase; HET: NAG FAD GSH; 2.40A {Saccharomyces cerevisiae}
Probab=98.18 E-value=2.2e-06 Score=81.69 Aligned_cols=99 Identities=15% Similarity=0.154 Sum_probs=67.0
Q ss_pred CCcEEEECCchhHHHHHHhhhccCceEEEEcCCCccccchhhhhhhcccccccccccchhccchhhhcCCCeEEEEE-Ee
Q 018704 62 KPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRNHMVFTPLLASTCVGTLEFRSVAEPIARIQPAISREPGSYFFLS-HC 140 (351)
Q Consensus 62 ~~~VvIIG~G~aGl~aA~~L~~~g~~v~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~v 140 (351)
..+|+|||||+.|+.+|..|++.|.+|+++++.+.... . +...+...........++.++.. +|
T Consensus 185 ~~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l~--~-------------~d~~~~~~l~~~l~~~Gv~i~~~~~v 249 (479)
T 2hqm_A 185 PKKVVVVGAGYIGIELAGVFHGLGSETHLVIRGETVLR--K-------------FDECIQNTITDHYVKEGINVHKLSKI 249 (479)
T ss_dssp CSEEEEECSSHHHHHHHHHHHHTTCEEEEECSSSSSCT--T-------------SCHHHHHHHHHHHHHHTCEEECSCCE
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCceEEEEeCCcccc--c-------------cCHHHHHHHHHHHHhCCeEEEeCCEE
Confidence 47899999999999999999999999999999776321 0 01111111122223346776654 67
Q ss_pred eeEeCCCCE--EEEEeecCc-cccCCCceeEeeccEEEEecCCCcCC
Q 018704 141 AGIDTDNHV--VHCETVTDE-LRTLEPWKFKISYDKLVIALGAEAST 184 (351)
Q Consensus 141 ~~i~~~~~~--v~~~~~~~~-~~~~~~~~~~~~~d~lviAtG~~p~~ 184 (351)
..++.+.+. +.+.. .+| . .+.+|.||+|+|..|+.
T Consensus 250 ~~i~~~~~~~~~~v~~-~~G~~--------~i~~D~vv~a~G~~p~~ 287 (479)
T 2hqm_A 250 VKVEKNVETDKLKIHM-NDSKS--------IDDVDELIWTIGRKSHL 287 (479)
T ss_dssp EEEEECC-CCCEEEEE-TTSCE--------EEEESEEEECSCEEECC
T ss_pred EEEEEcCCCcEEEEEE-CCCcE--------EEEcCEEEECCCCCCcc
Confidence 777754322 33332 455 4 89999999999998876
No 219
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris}
Probab=98.18 E-value=3.1e-06 Score=80.43 Aligned_cols=100 Identities=14% Similarity=0.228 Sum_probs=70.1
Q ss_pred CCcEEEECCchhHHHHHHhhhcc-CceEEEEcCCCccccchhhhhhhcccccccccccchhccchhhhcCCCeEEEEE-E
Q 018704 62 KPRVVVLGSGWAGCRLMKGIDTS-LYDVVCVSPRNHMVFTPLLASTCVGTLEFRSVAEPIARIQPAISREPGSYFFLS-H 139 (351)
Q Consensus 62 ~~~VvIIG~G~aGl~aA~~L~~~-g~~v~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 139 (351)
..+|+|||+|+.|+.+|..|++. |.+|+++++.+...-. .....+...........++.++.. .
T Consensus 159 ~~~vvViGgG~~g~e~A~~l~~~~g~~Vtlv~~~~~~l~~--------------~~~~~~~~~l~~~l~~~GV~i~~~~~ 224 (472)
T 3iwa_A 159 VSKAVIVGGGFIGLEMAVSLADMWGIDTTVVELADQIMPG--------------FTSKSLSQMLRHDLEKNDVVVHTGEK 224 (472)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHHHCCEEEEECSSSSSSTT--------------TSCHHHHHHHHHHHHHTTCEEECSCC
T ss_pred CCEEEEECCCHHHHHHHHHHHHhcCCcEEEEEccCccccc--------------ccCHHHHHHHHHHHHhcCCEEEeCCE
Confidence 47899999999999999999999 9999999997753210 011112222222334457777664 7
Q ss_pred eeeEeCCCCEEEEEeecCccccCCCceeEeeccEEEEecCCCcCC
Q 018704 140 CAGIDTDNHVVHCETVTDELRTLEPWKFKISYDKLVIALGAEAST 184 (351)
Q Consensus 140 v~~i~~~~~~v~~~~~~~~~~~~~~~~~~~~~d~lviAtG~~p~~ 184 (351)
|..++.+...+.+.. .+++ ++.+|.||+|+|..|..
T Consensus 225 v~~i~~~~~~v~v~~-~~g~--------~i~aD~Vv~a~G~~p~~ 260 (472)
T 3iwa_A 225 VVRLEGENGKVARVI-TDKR--------TLDADLVILAAGVSPNT 260 (472)
T ss_dssp EEEEEESSSBEEEEE-ESSC--------EEECSEEEECSCEEECC
T ss_pred EEEEEccCCeEEEEE-eCCC--------EEEcCEEEECCCCCcCH
Confidence 888887555554433 4565 89999999999998764
No 220
>2xve_A Flavin-containing monooxygenase; oxidoreductase; HET: FAD; 1.99A {Methylophaga aminisulfidivorans} PDB: 2xvf_A* 2xvh_A* 2xvi_A* 2xvj_A* 2xlt_A* 2vqb_A* 2vq7_A* 2xlu_A* 2xlp_A* 2xls_A* 2xlr_A*
Probab=98.18 E-value=1e-05 Score=76.66 Aligned_cols=92 Identities=20% Similarity=0.350 Sum_probs=67.6
Q ss_pred CeEEEECCChHHHHHHHHHHH---HHHHHHHhhhcCCCCccE---EEEEeCCCCCC------------------------
Q 018704 231 LHCVVVGGGPTGVEFSGELSD---FIMRDVRQRYSHVKDYIH---VTLIEANEILS------------------------ 280 (351)
Q Consensus 231 ~~v~VvGgG~~a~e~a~~l~~---~~~~~~~~~~~~~~~~~~---v~~~~~~~~l~------------------------ 280 (351)
++|+|||||++|+.+|..|.+ .| .+ |+++++...+.
T Consensus 3 ~~V~IIGaG~aGl~aA~~L~~~~~~G--------------~~~~~V~v~E~~~~~GG~w~~~~~~g~~~~g~~~~~~~y~ 68 (464)
T 2xve_A 3 TRIAILGAGPSGMAQLRAFQSAQEKG--------------AEIPELVCFEKQADWGGQWNYTWRTGLDENGEPVHSSMYR 68 (464)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHHHTT--------------CCCCEEEEECSSSSSCGGGSCCSCCSBCTTSSBCCCCCCT
T ss_pred CcEEEECccHHHHHHHHHHHhhhhcC--------------CCCCcEEEEEcCCCCCCEeecCCCCCccccCCCCcCcccc
Confidence 389999999999999999987 54 66 99999863110
Q ss_pred --------------CC---------------cHHHHHHHHHHhhhcCcE--EEcCe-EEEEeC--C----eEEecC---C
Q 018704 281 --------------SF---------------DDRLRHYATTQLSKSGVR--LVRGI-VKDVDS--Q----KLILND---G 319 (351)
Q Consensus 281 --------------~~---------------~~~~~~~~~~~l~~~gV~--~~~~~-v~~v~~--~----~v~~~~---g 319 (351)
.+ ...+.+.+.+.+++.|++ ++.+. |++++. + .|.+.+ |
T Consensus 69 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~gv~~~i~~~~~V~~v~~~~~~~~~~V~~~~~~~g 148 (464)
T 2xve_A 69 YLWSNGPKECLEFADYTFDEHFGKPIASYPPREVLWDYIKGRVEKAGVRKYIRFNTAVRHVEFNEDSQTFTVTVQDHTTD 148 (464)
T ss_dssp TCBCSSCGGGTCBTTBCHHHHHSSCCCSSCBHHHHHHHHHHHHHHHTCGGGEECSEEEEEEEEETTTTEEEEEEEETTTT
T ss_pred chhhcCChhhcccCCCCCCcccCCCCCCCCCHHHHHHHHHHHHHHcCCcceEEeCCEEEEEEEcCCCCcEEEEEEEcCCC
Confidence 00 034556677777778988 88884 888853 3 566654 4
Q ss_pred --cEEeccEEEEecC--CCCc
Q 018704 320 --TEVPYGLLVWSTG--VGPS 336 (351)
Q Consensus 320 --~~~~~D~vi~a~G--~~p~ 336 (351)
.++.+|.||+|+| ..|+
T Consensus 149 ~~~~~~~d~VVvAtG~~s~p~ 169 (464)
T 2xve_A 149 TIYSEEFDYVVCCTGHFSTPY 169 (464)
T ss_dssp EEEEEEESEEEECCCSSSSBC
T ss_pred ceEEEEcCEEEECCCCCCCCc
Confidence 5689999999999 5666
No 221
>2gv8_A Monooxygenase; FMO, FAD, NADPH, cofactor complex, PSI, structura genomics, protein structure initiative; HET: FAD NDP; 2.10A {Schizosaccharomyces pombe} SCOP: c.3.1.5 c.3.1.5 PDB: 2gvc_A* 1vqw_A*
Probab=98.18 E-value=8.5e-06 Score=76.85 Aligned_cols=85 Identities=9% Similarity=0.011 Sum_probs=62.8
Q ss_pred CCCcEEEECCchhHHHHHHhhhccCce-EEEEcCCCccccchhhhhhhcccccccccccchhccchhhhcCCCeEEEEEE
Q 018704 61 EKPRVVVLGSGWAGCRLMKGIDTSLYD-VVCVSPRNHMVFTPLLASTCVGTLEFRSVAEPIARIQPAISREPGSYFFLSH 139 (351)
Q Consensus 61 ~~~~VvIIG~G~aGl~aA~~L~~~g~~-v~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 139 (351)
..++|+|||+|.+|+-+|..|++.+.+ |+++++.+.+ ....++. ....
T Consensus 211 ~~k~VvVvG~G~sg~e~A~~l~~~~~~~V~l~~r~~~~------------------------------l~~~~i~-~~~~ 259 (447)
T 2gv8_A 211 VGESVLVVGGASSANDLVRHLTPVAKHPIYQSLLGGGD------------------------------IQNESLQ-QVPE 259 (447)
T ss_dssp TTCCEEEECSSHHHHHHHHHHTTTSCSSEEEECTTCCS------------------------------CBCSSEE-EECC
T ss_pred CCCEEEEEccCcCHHHHHHHHHHHhCCcEEEEeCCCCc------------------------------CCCCCeE-EecC
Confidence 357899999999999999999999999 9999987653 0012333 2456
Q ss_pred eeeEeCCCCEEEEEeecCccccCCCceeEeeccEEEEecCCCcCCCC
Q 018704 140 CAGIDTDNHVVHCETVTDELRTLEPWKFKISYDKLVIALGAEASTFG 186 (351)
Q Consensus 140 v~~i~~~~~~v~~~~~~~~~~~~~~~~~~~~~d~lviAtG~~p~~p~ 186 (351)
|..+..+...+.+ .+|+ ..+.+|.||+|||..|..+-
T Consensus 260 v~~~~~~~~~v~~---~dG~-------~~~~~D~vi~atG~~~~~~~ 296 (447)
T 2gv8_A 260 ITKFDPTTREIYL---KGGK-------VLSNIDRVIYCTGYLYSVPF 296 (447)
T ss_dssp EEEEETTTTEEEE---TTTE-------EECCCSEEEECCCBCCCCCC
T ss_pred eEEEecCCCEEEE---CCCC-------EeccCCEEEECCCCCcCCCC
Confidence 6666655556654 3554 13789999999999988765
No 222
>3cgb_A Pyridine nucleotide-disulfide oxidoreductase, CLA; coenzyme A, flavin adenine dinucleotide, selenomethionine, F flavoprotein; HET: COA FAD; 1.90A {Bacillus anthracis str} PDB: 3cgc_A* 3cgd_A* 3cge_A*
Probab=98.18 E-value=2.5e-06 Score=81.24 Aligned_cols=100 Identities=14% Similarity=0.143 Sum_probs=67.4
Q ss_pred CCCcEEEECCchhHHHHHHhhhccCceEEEEcCCCccccchhhhhhhcccccccccccchhccchhhhcCCCeEEEE-EE
Q 018704 61 EKPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRNHMVFTPLLASTCVGTLEFRSVAEPIARIQPAISREPGSYFFL-SH 139 (351)
Q Consensus 61 ~~~~VvIIG~G~aGl~aA~~L~~~g~~v~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 139 (351)
...+|+|||||++|+.+|..|++.|.+|+++++.+.... .+...+...........++.++. ..
T Consensus 185 ~~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~---------------~~~~~~~~~l~~~l~~~Gv~i~~~~~ 249 (480)
T 3cgb_A 185 KVEDVTIIGGGAIGLEMAETFVELGKKVRMIERNDHIGT---------------IYDGDMAEYIYKEADKHHIEILTNEN 249 (480)
T ss_dssp CCCEEEEECCHHHHHHHHHHHHHTTCEEEEECCGGGTTS---------------SSCHHHHHHHHHHHHHTTCEEECSCC
T ss_pred CCCeEEEECCCHHHHHHHHHHHhcCCeEEEEEeCCchhh---------------cCCHHHHHHHHHHHHHcCcEEEcCCE
Confidence 357999999999999999999999999999998765321 00111212222223334677664 47
Q ss_pred eeeEeCCCCEEEEEeecCccccCCCceeEeeccEEEEecCCCcCCC
Q 018704 140 CAGIDTDNHVVHCETVTDELRTLEPWKFKISYDKLVIALGAEASTF 185 (351)
Q Consensus 140 v~~i~~~~~~v~~~~~~~~~~~~~~~~~~~~~d~lviAtG~~p~~p 185 (351)
|+.++.+.+...+.. ++. ++.+|.||+|+|..|+.+
T Consensus 250 v~~i~~~~~v~~v~~--~~~--------~i~~D~vi~a~G~~p~~~ 285 (480)
T 3cgb_A 250 VKAFKGNERVEAVET--DKG--------TYKADLVLVSVGVKPNTD 285 (480)
T ss_dssp EEEEEESSBEEEEEE--TTE--------EEECSEEEECSCEEESCG
T ss_pred EEEEEcCCcEEEEEE--CCC--------EEEcCEEEECcCCCcChH
Confidence 777776544333322 233 799999999999887654
No 223
>2qae_A Lipoamide, dihydrolipoyl dehydrogenase; FAD-cystine-oxidoreductase, homodimer; HET: FAD; 1.90A {Trypanosoma cruzi}
Probab=98.18 E-value=3.5e-06 Score=79.97 Aligned_cols=103 Identities=16% Similarity=0.152 Sum_probs=68.5
Q ss_pred CCcEEEECCchhHHHHHHhhhccCceEEEEcCCCccccchhhhhhhcccccccccccchhccchhhh-cCCCeEEEE-EE
Q 018704 62 KPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRNHMVFTPLLASTCVGTLEFRSVAEPIARIQPAIS-REPGSYFFL-SH 139 (351)
Q Consensus 62 ~~~VvIIG~G~aGl~aA~~L~~~g~~v~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~-~~ 139 (351)
..+|+|||||+.|+.+|..|++.|.+|+++++.+.+.- . +...+........ ...++.++. .+
T Consensus 174 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~--~-------------~d~~~~~~l~~~l~~~~gv~i~~~~~ 238 (468)
T 2qae_A 174 PKTMVVIGGGVIGLELGSVWARLGAEVTVVEFAPRCAP--T-------------LDEDVTNALVGALAKNEKMKFMTSTK 238 (468)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSST--T-------------SCHHHHHHHHHHHHHHTCCEEECSCE
T ss_pred CceEEEECCCHHHHHHHHHHHHhCCEEEEEecCCcccc--c-------------CCHHHHHHHHHHHhhcCCcEEEeCCE
Confidence 47999999999999999999999999999999776320 0 1111222222223 345777665 47
Q ss_pred eeeEeCCCCEEEEEee-cCccccCCCceeEeeccEEEEecCCCcCCC
Q 018704 140 CAGIDTDNHVVHCETV-TDELRTLEPWKFKISYDKLVIALGAEASTF 185 (351)
Q Consensus 140 v~~i~~~~~~v~~~~~-~~~~~~~~~~~~~~~~d~lviAtG~~p~~p 185 (351)
|..++.+...+.+... .+++ ..++.+|.||+|+|..|+..
T Consensus 239 v~~i~~~~~~~~v~~~~~~g~------~~~i~~D~vv~a~G~~p~~~ 279 (468)
T 2qae_A 239 VVGGTNNGDSVSLEVEGKNGK------RETVTCEALLVSVGRRPFTG 279 (468)
T ss_dssp EEEEEECSSSEEEEEECC---------EEEEEESEEEECSCEEECCT
T ss_pred EEEEEEcCCeEEEEEEcCCCc------eEEEECCEEEECCCcccCCC
Confidence 8888766544443321 1331 12789999999999988764
No 224
>3ka7_A Oxidoreductase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; HET: FAD; 1.80A {Methanosarcina mazei}
Probab=98.18 E-value=1.1e-06 Score=82.15 Aligned_cols=52 Identities=19% Similarity=0.213 Sum_probs=42.0
Q ss_pred HHHHHHHHHHhhhcCcEEEcCe-EEEEeC--Ce---EEecCCcEEeccEEEEecCCCCc
Q 018704 284 DRLRHYATTQLSKSGVRLVRGI-VKDVDS--QK---LILNDGTEVPYGLLVWSTGVGPS 336 (351)
Q Consensus 284 ~~~~~~~~~~l~~~gV~~~~~~-v~~v~~--~~---v~~~~g~~~~~D~vi~a~G~~p~ 336 (351)
..+.+.+.+.+++.|+++++++ |+++.. ++ |.+ +|++++||.||+|+|....
T Consensus 196 ~~l~~~l~~~~~~~G~~i~~~~~V~~i~~~~~~~~gv~~-~g~~~~ad~VV~a~~~~~~ 253 (425)
T 3ka7_A 196 KGIIDALETVISANGGKIHTGQEVSKILIENGKAAGIIA-DDRIHDADLVISNLGHAAT 253 (425)
T ss_dssp HHHHHHHHHHHHHTTCEEECSCCEEEEEEETTEEEEEEE-TTEEEECSEEEECSCHHHH
T ss_pred HHHHHHHHHHHHHcCCEEEECCceeEEEEECCEEEEEEE-CCEEEECCEEEECCCHHHH
Confidence 5678888899999999999995 988853 33 444 5788999999999997654
No 225
>3nrn_A Uncharacterized protein PF1083; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: AMP; 2.10A {Pyrococcus furiosus}
Probab=98.17 E-value=1.1e-06 Score=82.17 Aligned_cols=54 Identities=11% Similarity=0.191 Sum_probs=44.7
Q ss_pred cHHHHHHHHHHhhhcCcEEEcCe-EEEEeC--CeEEecCCcEEeccEEEEecCCCCc
Q 018704 283 DDRLRHYATTQLSKSGVRLVRGI-VKDVDS--QKLILNDGTEVPYGLLVWSTGVGPS 336 (351)
Q Consensus 283 ~~~~~~~~~~~l~~~gV~~~~~~-v~~v~~--~~v~~~~g~~~~~D~vi~a~G~~p~ 336 (351)
...+.+.+.+.+++.|+++++++ |+++.. ++++..+|.+++||.||+|+|....
T Consensus 188 ~~~l~~~l~~~~~~~G~~i~~~~~V~~i~~~~~~vV~~~g~~~~ad~Vv~a~~~~~~ 244 (421)
T 3nrn_A 188 CKAVIDELERIIMENKGKILTRKEVVEINIEEKKVYTRDNEEYSFDVAISNVGVRET 244 (421)
T ss_dssp HHHHHHHHHHHHHTTTCEEESSCCEEEEETTTTEEEETTCCEEECSEEEECSCHHHH
T ss_pred HHHHHHHHHHHHHHCCCEEEcCCeEEEEEEECCEEEEeCCcEEEeCEEEECCCHHHH
Confidence 35788889999999999999995 999864 4555667888999999999997544
No 226
>1fec_A Trypanothione reductase; redox-active center, oxidoreductase, flavoprotein, FAD, NADP; HET: FAD; 1.70A {Crithidia fasciculata} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1fea_A* 1feb_A* 2tpr_A* 1tyt_A* 1typ_A* 2jk6_A* 2w0h_A* 2yau_A* 2x50_A* 2ve2_A*
Probab=98.17 E-value=3.2e-06 Score=80.72 Aligned_cols=100 Identities=12% Similarity=0.121 Sum_probs=69.9
Q ss_pred CCcEEEECCchhHHHHHHhhhcc---CceEEEEcCCCccccchhhhhhhcccccccccccchhccchhhhcCCCeEEEEE
Q 018704 62 KPRVVVLGSGWAGCRLMKGIDTS---LYDVVCVSPRNHMVFTPLLASTCVGTLEFRSVAEPIARIQPAISREPGSYFFLS 138 (351)
Q Consensus 62 ~~~VvIIG~G~aGl~aA~~L~~~---g~~v~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 138 (351)
..+++|||||+.|+.+|..|++. |.+|+++++.+.+.- . +...+...........++.++..
T Consensus 187 ~~~vvViGgG~ig~E~A~~l~~~~~~g~~Vtlv~~~~~~l~--~-------------~d~~~~~~l~~~l~~~GV~i~~~ 251 (490)
T 1fec_A 187 PKRALCVGGGYISIEFAGIFNAYKARGGQVDLAYRGDMILR--G-------------FDSELRKQLTEQLRANGINVRTH 251 (490)
T ss_dssp CSEEEEECSSHHHHHHHHHHHHHSCTTCEEEEEESSSSSST--T-------------SCHHHHHHHHHHHHHTTEEEEET
T ss_pred CCeEEEECCCHHHHHHHHHHHhhccCcCeEEEEEcCCCccc--c-------------cCHHHHHHHHHHHHhCCCEEEeC
Confidence 46999999999999999999998 999999999875320 0 11112222222233457777664
Q ss_pred -EeeeEeCCCC-EEEEEeecCccccCCCceeEeeccEEEEecCCCcCCC
Q 018704 139 -HCAGIDTDNH-VVHCETVTDELRTLEPWKFKISYDKLVIALGAEASTF 185 (351)
Q Consensus 139 -~v~~i~~~~~-~v~~~~~~~~~~~~~~~~~~~~~d~lviAtG~~p~~p 185 (351)
.|..++.+.. .+.+.. .+++ .+.+|.||+|+|..|+..
T Consensus 252 ~~v~~i~~~~~~~~~v~~-~~G~--------~i~~D~vv~a~G~~p~~~ 291 (490)
T 1fec_A 252 ENPAKVTKNADGTRHVVF-ESGA--------EADYDVVMLAIGRVPRSQ 291 (490)
T ss_dssp CCEEEEEECTTSCEEEEE-TTSC--------EEEESEEEECSCEEESCT
T ss_pred CEEEEEEEcCCCEEEEEE-CCCc--------EEEcCEEEEccCCCcCcc
Confidence 7888876542 344432 4565 899999999999988764
No 227
>2wpf_A Trypanothione reductase; oxidoreductase, trypanosomiasis, sleeping sickness, flavoPro redox-active center; HET: FAD WPF; 1.90A {Trypanosoma brucei} PDB: 2wov_A* 2wow_A* 2wp5_A* 2wp6_A* 2wpc_A* 2wpe_A* 2woi_A* 2wba_A* 1nda_A* 1gxf_A* 1bzl_A* 1aog_A*
Probab=98.17 E-value=2.9e-06 Score=81.17 Aligned_cols=100 Identities=15% Similarity=0.134 Sum_probs=69.1
Q ss_pred CCcEEEECCchhHHHHHHhhhcc---CceEEEEcCCCccccchhhhhhhcccccccccccchhccchhhhcCCCeEEEEE
Q 018704 62 KPRVVVLGSGWAGCRLMKGIDTS---LYDVVCVSPRNHMVFTPLLASTCVGTLEFRSVAEPIARIQPAISREPGSYFFLS 138 (351)
Q Consensus 62 ~~~VvIIG~G~aGl~aA~~L~~~---g~~v~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 138 (351)
..+|+|||||+.|+.+|..|++. |.+|+++++.+...- . +...+...........++.++..
T Consensus 191 ~~~vvViGgG~ig~E~A~~l~~~~~~g~~Vtlv~~~~~~l~--~-------------~d~~~~~~l~~~l~~~GV~i~~~ 255 (495)
T 2wpf_A 191 PRRVLTVGGGFISVEFAGIFNAYKPPGGKVTLCYRNNLILR--G-------------FDETIREEVTKQLTANGIEIMTN 255 (495)
T ss_dssp CSEEEEECSSHHHHHHHHHHHHHCCTTCEEEEEESSSSSCT--T-------------SCHHHHHHHHHHHHHTTCEEEES
T ss_pred CCeEEEECCCHHHHHHHHHHHhhCCCCCeEEEEEcCCcccc--c-------------cCHHHHHHHHHHHHhCCCEEEeC
Confidence 46999999999999999999998 999999999776320 0 11112222222233457777654
Q ss_pred -EeeeEeCCCC-EEEEEeecCccccCCCceeEeeccEEEEecCCCcCCC
Q 018704 139 -HCAGIDTDNH-VVHCETVTDELRTLEPWKFKISYDKLVIALGAEASTF 185 (351)
Q Consensus 139 -~v~~i~~~~~-~v~~~~~~~~~~~~~~~~~~~~~d~lviAtG~~p~~p 185 (351)
.|..++.+.. .+.+.. .+|+ .+.+|.||+|+|..|+..
T Consensus 256 ~~v~~i~~~~~~~~~v~~-~~G~--------~i~~D~vv~a~G~~p~~~ 295 (495)
T 2wpf_A 256 ENPAKVSLNTDGSKHVTF-ESGK--------TLDVDVVMMAIGRIPRTN 295 (495)
T ss_dssp CCEEEEEECTTSCEEEEE-TTSC--------EEEESEEEECSCEEECCG
T ss_pred CEEEEEEEcCCceEEEEE-CCCc--------EEEcCEEEECCCCccccc
Confidence 7888876542 233432 4565 899999999999987764
No 228
>1c0p_A D-amino acid oxidase; alpha-beta-alpha motif, flavin containing protein, oxidoreductase; HET: FAD; 1.20A {Rhodosporidium toruloides} SCOP: c.4.1.2 d.16.1.3 PDB: 1c0i_A* 1c0l_A* 1c0k_A*
Probab=98.15 E-value=1.5e-06 Score=79.54 Aligned_cols=35 Identities=31% Similarity=0.314 Sum_probs=32.5
Q ss_pred CCCcEEEECCchhHHHHHHhhhccCceEEEEcCCC
Q 018704 61 EKPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRN 95 (351)
Q Consensus 61 ~~~~VvIIG~G~aGl~aA~~L~~~g~~v~vie~~~ 95 (351)
+.+||+|||||++|+++|+.|++.|++|+|||+..
T Consensus 5 ~~~dVvVIG~Gi~Gls~A~~La~~G~~V~vle~~~ 39 (363)
T 1c0p_A 5 SQKRVVVLGSGVIGLSSALILARKGYSVHILARDL 39 (363)
T ss_dssp CSCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSC
T ss_pred CCCCEEEECCCHHHHHHHHHHHhCCCEEEEEeccC
Confidence 45799999999999999999999999999999864
No 229
>3i6d_A Protoporphyrinogen oxidase; protein-inhibitor complex, cytoplasm, FAD, flavoprotein, oxidoreductase, porphyrin biosynthesis; HET: FAD ACJ; 2.90A {Bacillus subtilis}
Probab=98.15 E-value=7.5e-07 Score=84.34 Aligned_cols=37 Identities=19% Similarity=0.331 Sum_probs=33.9
Q ss_pred CCcEEEECCchhHHHHHHhhhccC------ceEEEEcCCCccc
Q 018704 62 KPRVVVLGSGWAGCRLMKGIDTSL------YDVVCVSPRNHMV 98 (351)
Q Consensus 62 ~~~VvIIG~G~aGl~aA~~L~~~g------~~v~vie~~~~~~ 98 (351)
++||+|||||++||+||++|++.| ++|+|+|+++...
T Consensus 5 ~~dVvIIGaGiaGLsaA~~L~~~G~~~~~~~~V~vlEa~~~~G 47 (470)
T 3i6d_A 5 KKHVVIIGGGITGLAAAFYMEKEIKEKNLPLELTLVEASPRVG 47 (470)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHHTTTTCSEEEEEECSSSSSC
T ss_pred CCcEEEECCCHHHHHHHHHHHHhccccCCCCCEEEEECCCCCC
Confidence 479999999999999999999999 9999999987653
No 230
>3lad_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD; 2.20A {Azotobacter vinelandii} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1lpf_A*
Probab=98.15 E-value=6.7e-06 Score=78.18 Aligned_cols=103 Identities=22% Similarity=0.295 Sum_probs=70.3
Q ss_pred CCcEEEECCchhHHHHHHhhhccCceEEEEcCCCccccchhhhhhhcccccccccccchhccchhhhcCCCeEEEE-EEe
Q 018704 62 KPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRNHMVFTPLLASTCVGTLEFRSVAEPIARIQPAISREPGSYFFL-SHC 140 (351)
Q Consensus 62 ~~~VvIIG~G~aGl~aA~~L~~~g~~v~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~v 140 (351)
..+|+|||+|+.|+.+|..|++.|.+|+++++.+.+.. .+...+...........++.++. ..|
T Consensus 180 ~~~v~ViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~---------------~~~~~~~~~l~~~l~~~Gv~v~~~~~v 244 (476)
T 3lad_A 180 PGKLGVIGAGVIGLELGSVWARLGAEVTVLEAMDKFLP---------------AVDEQVAKEAQKILTKQGLKILLGARV 244 (476)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSST---------------TSCHHHHHHHHHHHHHTTEEEEETCEE
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCcEEEEecCCCcCc---------------ccCHHHHHHHHHHHHhCCCEEEECCEE
Confidence 47899999999999999999999999999999775321 01111222222233445777765 478
Q ss_pred eeEeCCCCEEEEEeecCccccCCCceeEeeccEEEEecCCCcCCC
Q 018704 141 AGIDTDNHVVHCETVTDELRTLEPWKFKISYDKLVIALGAEASTF 185 (351)
Q Consensus 141 ~~i~~~~~~v~~~~~~~~~~~~~~~~~~~~~d~lviAtG~~p~~p 185 (351)
..++.+.+.+.+...+.+. ...+.+|.||+|+|..|+..
T Consensus 245 ~~i~~~~~~~~v~~~~~~g------~~~~~~D~vi~a~G~~p~~~ 283 (476)
T 3lad_A 245 TGTEVKNKQVTVKFVDAEG------EKSQAFDKLIVAVGRRPVTT 283 (476)
T ss_dssp EEEEECSSCEEEEEESSSE------EEEEEESEEEECSCEEECCT
T ss_pred EEEEEcCCEEEEEEEeCCC------cEEEECCEEEEeeCCcccCC
Confidence 8888766555443322110 12789999999999988765
No 231
>1xdi_A RV3303C-LPDA; reductase, FAD, NAD, NADP, unkno function; HET: FAD; 2.81A {Mycobacterium tuberculosis} SCOP: c.3.1.5 d.87.1.1
Probab=98.15 E-value=3e-06 Score=81.17 Aligned_cols=100 Identities=18% Similarity=0.235 Sum_probs=70.4
Q ss_pred CCcEEEECCchhHHHHHHhhhccCceEEEEcCCCccccchhhhhhhcccccccccccchhccchhhhcCCCeEEEE-EEe
Q 018704 62 KPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRNHMVFTPLLASTCVGTLEFRSVAEPIARIQPAISREPGSYFFL-SHC 140 (351)
Q Consensus 62 ~~~VvIIG~G~aGl~aA~~L~~~g~~v~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~v 140 (351)
..+++|||||+.|+.+|..|++.|.+|+++++.+.+.-. +...+...........++.++. ..|
T Consensus 182 ~~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l~~---------------~d~~~~~~l~~~l~~~GV~i~~~~~V 246 (499)
T 1xdi_A 182 PDHLIVVGSGVTGAEFVDAYTELGVPVTVVASQDHVLPY---------------EDADAALVLEESFAERGVRLFKNARA 246 (499)
T ss_dssp CSSEEEESCSHHHHHHHHHHHHTTCCEEEECSSSSSSCC---------------SSHHHHHHHHHHHHHTTCEEETTCCE
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCeEEEEEcCCccccc---------------cCHHHHHHHHHHHHHCCCEEEeCCEE
Confidence 478999999999999999999999999999997763210 1111222222223344777665 478
Q ss_pred eeEeCCCCEEEEEeecCccccCCCceeEeeccEEEEecCCCcCCC
Q 018704 141 AGIDTDNHVVHCETVTDELRTLEPWKFKISYDKLVIALGAEASTF 185 (351)
Q Consensus 141 ~~i~~~~~~v~~~~~~~~~~~~~~~~~~~~~d~lviAtG~~p~~p 185 (351)
+.++.+...+.+.. .++. ++.+|.||+|+|..|+..
T Consensus 247 ~~i~~~~~~v~v~~-~~g~--------~i~aD~Vv~a~G~~p~~~ 282 (499)
T 1xdi_A 247 ASVTRTGAGVLVTM-TDGR--------TVEGSHALMTIGSVPNTS 282 (499)
T ss_dssp EEEEECSSSEEEEE-TTSC--------EEEESEEEECCCEEECCS
T ss_pred EEEEEeCCEEEEEE-CCCc--------EEEcCEEEECCCCCcCCC
Confidence 88876655455543 4555 899999999999988764
No 232
>2e1m_A L-glutamate oxidase; L-amino acid oxidase, FAD, L-GOX, flavo oxidoreductase; HET: FAD; 2.80A {Streptomyces SP}
Probab=98.15 E-value=1.9e-06 Score=79.10 Aligned_cols=37 Identities=22% Similarity=0.316 Sum_probs=34.1
Q ss_pred CCCcEEEECCchhHHHHHHhhhccCceEEEEcCC-Ccc
Q 018704 61 EKPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPR-NHM 97 (351)
Q Consensus 61 ~~~~VvIIG~G~aGl~aA~~L~~~g~~v~vie~~-~~~ 97 (351)
..+||+|||||++||+||+.|++.|++|+|+|++ +..
T Consensus 43 ~~~~V~IIGAGiaGL~aA~~L~~~G~~V~VlE~~~~~v 80 (376)
T 2e1m_A 43 PPKRILIVGAGIAGLVAGDLLTRAGHDVTILEANANRV 80 (376)
T ss_dssp SCCEEEEECCBHHHHHHHHHHHHTSCEEEEECSCSSCC
T ss_pred CCceEEEECCCHHHHHHHHHHHHCCCcEEEEecccccc
Confidence 4579999999999999999999999999999998 654
No 233
>2i0z_A NAD(FAD)-utilizing dehydrogenases; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: FAD; 1.84A {Bacillus cereus} SCOP: c.3.1.8 e.74.1.1
Probab=98.14 E-value=1.1e-05 Score=76.14 Aligned_cols=91 Identities=22% Similarity=0.371 Sum_probs=69.3
Q ss_pred CeEEEECCChHHHHHHHHHHHHHHHHHHhhhcCCCCccEEEEEeCCCCCC--------------------C---------
Q 018704 231 LHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEILS--------------------S--------- 281 (351)
Q Consensus 231 ~~v~VvGgG~~a~e~a~~l~~~~~~~~~~~~~~~~~~~~v~~~~~~~~l~--------------------~--------- 281 (351)
.+|+|||||.+|+-+|..|++.+ .+|+++++..... .
T Consensus 27 ~dVvIIGgG~aGl~aA~~la~~G--------------~~V~llEk~~~~g~~~~~sg~g~~~~~~~~~~~~~~~~~~~~~ 92 (447)
T 2i0z_A 27 YDVIVIGGGPSGLMAAIGAAEEG--------------ANVLLLDKGNKLGRKLAISGGGRCNVTNRLPLDEIVKHIPGNG 92 (447)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTT--------------CCEEEECSSSSSCHHHHHTGGGTCCCEECSCHHHHHHTCTBTG
T ss_pred CCEEEECCcHHHHHHHHHHHHCC--------------CCEEEEECCCCCCceeEEeCCCceeccCcccHHHHHHHhccCh
Confidence 37999999999999999998866 7888888753110 0
Q ss_pred ----------------------------------C-----cHHHHHHHHHHhhhcCcEEEcCe-EEEEe--CC---eEEe
Q 018704 282 ----------------------------------F-----DDRLRHYATTQLSKSGVRLVRGI-VKDVD--SQ---KLIL 316 (351)
Q Consensus 282 ----------------------------------~-----~~~~~~~~~~~l~~~gV~~~~~~-v~~v~--~~---~v~~ 316 (351)
+ ...+.+.+.+.+++.||+++.+. |+++. ++ +|.+
T Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~g~~~p~~~~~~~l~~~L~~~~~~~GV~i~~~~~V~~i~~~~~~v~~V~~ 172 (447)
T 2i0z_A 93 RFLYSAFSIFNNEDIITFFENLGVKLKEEDHGRMFPVSNKAQSVVDALLTRLKDLGVKIRTNTPVETIEYENGQTKAVIL 172 (447)
T ss_dssp GGGHHHHHHSCHHHHHHHHHHTTCCEEECGGGEEEETTCCHHHHHHHHHHHHHHTTCEEECSCCEEEEEEETTEEEEEEE
T ss_pred HHHHHHHHhcCHHHHHHHHHhcCCceEEeeCCEEECCCCCHHHHHHHHHHHHHHCCCEEEeCcEEEEEEecCCcEEEEEE
Confidence 0 02334556667778899999995 88885 33 3677
Q ss_pred cCCcEEeccEEEEecCCCC
Q 018704 317 NDGTEVPYGLLVWSTGVGP 335 (351)
Q Consensus 317 ~~g~~~~~D~vi~a~G~~p 335 (351)
.+|+++.+|.||+|+|..+
T Consensus 173 ~~G~~i~Ad~VVlAtGg~s 191 (447)
T 2i0z_A 173 QTGEVLETNHVVIAVGGKS 191 (447)
T ss_dssp TTCCEEECSCEEECCCCSS
T ss_pred CCCCEEECCEEEECCCCCc
Confidence 7887799999999999887
No 234
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=98.14 E-value=4.8e-06 Score=80.92 Aligned_cols=99 Identities=15% Similarity=0.227 Sum_probs=67.5
Q ss_pred CCcEEEECCchhHHHHHHhhhccCceEEEEcCCCccccchhhhhhhcccccccccccchhccchhhhcCCCeEEEE-EEe
Q 018704 62 KPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRNHMVFTPLLASTCVGTLEFRSVAEPIARIQPAISREPGSYFFL-SHC 140 (351)
Q Consensus 62 ~~~VvIIG~G~aGl~aA~~L~~~g~~v~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~v 140 (351)
..+|+|||||+.|+.+|..|++.|.+|+++++.+...- . +...+...........++.++. ..+
T Consensus 151 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~--~-------------~~~~~~~~l~~~l~~~GV~i~~~~~v 215 (565)
T 3ntd_A 151 VEHATVVGGGFIGLEMMESLHHLGIKTTLLELADQVMT--P-------------VDREMAGFAHQAIRDQGVDLRLGTAL 215 (565)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSCT--T-------------SCHHHHHHHHHHHHHTTCEEEETCCE
T ss_pred CCEEEEECCCHHHHHHHHHHHhcCCcEEEEEcCCccch--h-------------cCHHHHHHHHHHHHHCCCEEEeCCeE
Confidence 46899999999999999999999999999999775321 0 0111122222223344677665 467
Q ss_pred eeEeC-------------------CCCEEEEEeecCccccCCCceeEeeccEEEEecCCCcCC
Q 018704 141 AGIDT-------------------DNHVVHCETVTDELRTLEPWKFKISYDKLVIALGAEAST 184 (351)
Q Consensus 141 ~~i~~-------------------~~~~v~~~~~~~~~~~~~~~~~~~~~d~lviAtG~~p~~ 184 (351)
..+.. ....+.+.. .+++ .+.+|.||+|+|..|..
T Consensus 216 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~-~~g~--------~i~~D~vi~a~G~~p~~ 269 (565)
T 3ntd_A 216 SEVSYQVQTHVASDAAGEDTAHQHIKGHLSLTL-SNGE--------LLETDLLIMAIGVRPET 269 (565)
T ss_dssp EEEEEECCCCCCCGGGTCCCTTCCTTCEEEEEE-TTSC--------EEEESEEEECSCEEECC
T ss_pred EEEeccccccccccccccccccccCCCcEEEEE-cCCC--------EEEcCEEEECcCCccch
Confidence 77765 344454433 4565 89999999999988764
No 235
>4ap3_A Steroid monooxygenase; oxidoreductase, baeyer-villiger; HET: FAD NAP; 2.39A {Rhodococcus rhodochrous} PDB: 4aox_A* 4aos_A* 4ap1_A*
Probab=98.14 E-value=9.5e-06 Score=78.53 Aligned_cols=92 Identities=20% Similarity=0.239 Sum_probs=71.1
Q ss_pred CeEEEECCChHHHHHHHHHHHHHHHHHHhhhcCCCCccEEEEEeCCCCC---------CC-------------C------
Q 018704 231 LHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEIL---------SS-------------F------ 282 (351)
Q Consensus 231 ~~v~VvGgG~~a~e~a~~l~~~~~~~~~~~~~~~~~~~~v~~~~~~~~l---------~~-------------~------ 282 (351)
.+|+|||||.+|+.+|..|.+.+ .+|+++++...+ +. +
T Consensus 22 ~dVvIIGaG~aGl~aA~~L~~~G--------------~~v~iiE~~~~~GGtw~~~~ypg~~~dv~s~~y~~~f~~~~~~ 87 (549)
T 4ap3_A 22 YDVVVVGAGIAGLYAIHRFRSQG--------------LTVRAFEAASGVGGVWYWNRYPGARCDVESIDYSYSFSPELEQ 87 (549)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTT--------------CCEEEECSSSSSCTHHHHCCCTTCBCSSCTTTSSCCSCHHHHH
T ss_pred CCEEEECchHHHHHHHHHHHhCC--------------CCEEEEeCCCCCCCccccCCCCCceeCCCchhccccccccccc
Confidence 48999999999999999998766 899999985311 00 0
Q ss_pred ----------cHHHHHHHHHHhhhcCc--EEEcC-eEEEEe--CC----eEEecCCcEEeccEEEEecC--CCCc
Q 018704 283 ----------DDRLRHYATTQLSKSGV--RLVRG-IVKDVD--SQ----KLILNDGTEVPYGLLVWSTG--VGPS 336 (351)
Q Consensus 283 ----------~~~~~~~~~~~l~~~gV--~~~~~-~v~~v~--~~----~v~~~~g~~~~~D~vi~a~G--~~p~ 336 (351)
.+++.+.+.+.+++.++ +++.+ +|++++ ++ .|.+.+|+++.+|.||+|+| ..|.
T Consensus 88 ~~~~~~~~~~~~ei~~yl~~~~~~~g~~~~i~~~~~V~~i~~~~~~~~w~V~~~~G~~i~ad~lV~AtG~~s~p~ 162 (549)
T 4ap3_A 88 EWNWSEKYATQPEILAYLEHVADRFDLRRDIRFDTRVTSAVLDEEGLRWTVRTDRGDEVSARFLVVAAGPLSNAN 162 (549)
T ss_dssp HCCCSSSSCBHHHHHHHHHHHHHHTTCGGGEECSCCEEEEEEETTTTEEEEEETTCCEEEEEEEEECCCSEEECC
T ss_pred CCCCccCCCCHHHHHHHHHHHHHHcCCCccEEECCEEEEEEEcCCCCEEEEEECCCCEEEeCEEEECcCCCCCCC
Confidence 13566777777888888 78888 488874 33 68888999999999999999 4444
No 236
>2b9w_A Putative aminooxidase; isomerase, conjugated linoleic acid, FAD; HET: FAD 12P; 1.95A {Propionibacterium acnes} PDB: 2b9x_A* 2b9y_A* 2ba9_A* 2bab_A* 2bac_A*
Probab=98.14 E-value=1.7e-06 Score=80.99 Aligned_cols=37 Identities=19% Similarity=0.319 Sum_probs=34.2
Q ss_pred CCCcEEEECCchhHHHHHHhhhccC-ceEEEEcCCCcc
Q 018704 61 EKPRVVVLGSGWAGCRLMKGIDTSL-YDVVCVSPRNHM 97 (351)
Q Consensus 61 ~~~~VvIIG~G~aGl~aA~~L~~~g-~~v~vie~~~~~ 97 (351)
.++||+|||||++||+||+.|++.| .+|+|+|++++.
T Consensus 5 ~~~~v~IIGaG~aGl~aA~~L~~~g~~~v~v~E~~~~~ 42 (424)
T 2b9w_A 5 KDSRIAIIGAGPAGLAAGMYLEQAGFHDYTILERTDHV 42 (424)
T ss_dssp TTCCEEEECCSHHHHHHHHHHHHTTCCCEEEECSSSCS
T ss_pred CCCCEEEECcCHHHHHHHHHHHhCCCCcEEEEECCCCC
Confidence 4579999999999999999999999 899999998765
No 237
>2oln_A NIKD protein; flavoprotein, rossmann fold, oxidoreductase; HET: FAD; 1.15A {Streptomyces tendae} PDB: 2olo_A* 3hzl_A* 2q6u_A*
Probab=98.14 E-value=9.3e-07 Score=81.95 Aligned_cols=35 Identities=20% Similarity=0.176 Sum_probs=32.5
Q ss_pred CCcEEEECCchhHHHHHHhhhccCceEEEEcCCCc
Q 018704 62 KPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRNH 96 (351)
Q Consensus 62 ~~~VvIIG~G~aGl~aA~~L~~~g~~v~vie~~~~ 96 (351)
.+||+|||||++|+++|+.|++.|++|+|||+...
T Consensus 4 ~~DVvIIGaG~~Gl~~A~~La~~G~~V~vlE~~~~ 38 (397)
T 2oln_A 4 SYDVVVVGGGPVGLATAWQVAERGHRVLVLERHTF 38 (397)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSCT
T ss_pred cCCEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCC
Confidence 37999999999999999999999999999998754
No 238
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=98.13 E-value=4.2e-06 Score=81.81 Aligned_cols=97 Identities=15% Similarity=0.280 Sum_probs=69.2
Q ss_pred CCcEEEECCchhHHHHHHhhhccCceEEEEcCCCccccchhhhhhhcccccccccccchhccchhhhcCCCeEEEE-EEe
Q 018704 62 KPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRNHMVFTPLLASTCVGTLEFRSVAEPIARIQPAISREPGSYFFL-SHC 140 (351)
Q Consensus 62 ~~~VvIIG~G~aGl~aA~~L~~~g~~v~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~v 140 (351)
..+|+|||||+.|+.+|..|++.|.+|+++++.+...-. +...+...........++.++. ..|
T Consensus 187 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~---------------~~~~~~~~l~~~l~~~GV~i~~~~~v 251 (588)
T 3ics_A 187 PRHATVIGGGFIGVEMVENLRERGIEVTLVEMANQVMPP---------------IDYEMAAYVHEHMKNHDVELVFEDGV 251 (588)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCTT---------------SCHHHHHHHHHHHHHTTCEEECSCCE
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCeEEEEecCCccccc---------------CCHHHHHHHHHHHHHcCCEEEECCeE
Confidence 478999999999999999999999999999987753210 1111222222223345777665 578
Q ss_pred eeEeCCCCEEEEEeecCccccCCCceeEeeccEEEEecCCCcCC
Q 018704 141 AGIDTDNHVVHCETVTDELRTLEPWKFKISYDKLVIALGAEAST 184 (351)
Q Consensus 141 ~~i~~~~~~v~~~~~~~~~~~~~~~~~~~~~d~lviAtG~~p~~ 184 (351)
..++.+...+.+ .+++ ++.+|.||+|+|..|..
T Consensus 252 ~~i~~~~~~v~~---~~g~--------~i~~D~Vi~a~G~~p~~ 284 (588)
T 3ics_A 252 DALEENGAVVRL---KSGS--------VIQTDMLILAIGVQPES 284 (588)
T ss_dssp EEEEGGGTEEEE---TTSC--------EEECSEEEECSCEEECC
T ss_pred EEEecCCCEEEE---CCCC--------EEEcCEEEEccCCCCCh
Confidence 888776566554 4565 89999999999988765
No 239
>4eqs_A Coenzyme A disulfide reductase; oxidoreductase; HET: COA FAD; 1.50A {Staphylococcus aureus subsp} PDB: 1yqz_A* 4eqw_A* 4em4_A* 4em3_A* 4eqr_A* 4emw_A* 4eqx_A*
Probab=98.13 E-value=3.8e-06 Score=79.02 Aligned_cols=96 Identities=9% Similarity=0.151 Sum_probs=65.8
Q ss_pred CCcEEEECCchhHHHHHHhhhccCceEEEEcCCCccccchhhhhhhcccccccccccchhccchhhhcCCCeEEEE-EEe
Q 018704 62 KPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRNHMVFTPLLASTCVGTLEFRSVAEPIARIQPAISREPGSYFFL-SHC 140 (351)
Q Consensus 62 ~~~VvIIG~G~aGl~aA~~L~~~g~~v~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~v 140 (351)
..+|+|||||+.|+.+|..+++.|.+|+|+++.+.+.- . ....+.+.........++.++. .+|
T Consensus 147 ~~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~ll~-----~----------~d~~~~~~~~~~l~~~gV~i~~~~~v 211 (437)
T 4eqs_A 147 VDKVLVVGAGYVSLEVLENLYERGLHPTLIHRSDKINK-----L----------MDADMNQPILDELDKREIPYRLNEEI 211 (437)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCEEEEEESSSCCST-----T----------SCGGGGHHHHHHHHHTTCCEEESCCE
T ss_pred CcEEEEECCccchhhhHHHHHhcCCcceeeeeeccccc-----c----------ccchhHHHHHHHhhccceEEEeccEE
Confidence 46899999999999999999999999999999776320 0 0111122222223334665554 366
Q ss_pred eeEeCCCCEEEEEeecCccccCCCceeEeeccEEEEecCCCcCCC
Q 018704 141 AGIDTDNHVVHCETVTDELRTLEPWKFKISYDKLVIALGAEASTF 185 (351)
Q Consensus 141 ~~i~~~~~~v~~~~~~~~~~~~~~~~~~~~~d~lviAtG~~p~~p 185 (351)
..++.. .+.+ .+++ .+.+|.|++|+|..|+..
T Consensus 212 ~~~~~~--~v~~---~~g~--------~~~~D~vl~a~G~~Pn~~ 243 (437)
T 4eqs_A 212 NAINGN--EITF---KSGK--------VEHYDMIIEGVGTHPNSK 243 (437)
T ss_dssp EEEETT--EEEE---TTSC--------EEECSEEEECCCEEESCG
T ss_pred EEecCC--eeee---cCCe--------EEeeeeEEEEeceecCcH
Confidence 666543 4443 4666 899999999999888654
No 240
>3l8k_A Dihydrolipoyl dehydrogenase; redox-active center, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.50A {Sulfolobus solfataricus}
Probab=98.13 E-value=1e-05 Score=76.70 Aligned_cols=91 Identities=20% Similarity=0.282 Sum_probs=68.9
Q ss_pred eEEEECCChHHHHHHHHHHHHHHHHHHhhhcCCCCccEEEEEeCCCCCCC------------------------------
Q 018704 232 HCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEILSS------------------------------ 281 (351)
Q Consensus 232 ~v~VvGgG~~a~e~a~~l~~~~~~~~~~~~~~~~~~~~v~~~~~~~~l~~------------------------------ 281 (351)
+|+|||||+.|+.+|..|.+.| .+|+++++.+.+.+
T Consensus 6 DVvVIGgG~aGl~aA~~l~~~G--------------~~V~liEk~~~~GG~~~~~gciPsk~l~~~a~~~~~~~~~~~~~ 71 (466)
T 3l8k_A 6 DVVVIGAGGAGYHGAFRLAKAK--------------YNVLMADPKGELGGNCLYSGCVPSKTVREVIQTAWRLTNIANVK 71 (466)
T ss_dssp EEEEECCSHHHHHHHHHHHHTT--------------CCEEEECTTSSSSHHHHHHSHHHHHHHHHHHHHHHHHHHHHCSC
T ss_pred eEEEECCCHHHHHHHHHHHhCC--------------CeEEEEECCCCCCCcccccCCCchHHHHHHHHHHHHHHhcccCC
Confidence 7999999999999999999877 89999996542211
Q ss_pred --CcH-H----------HH--HHHHHHhhhcCcEEEcCeEEEEeCCe--EEecCCcE--EeccEEEEecCCCCc
Q 018704 282 --FDD-R----------LR--HYATTQLSKSGVRLVRGIVKDVDSQK--LILNDGTE--VPYGLLVWSTGVGPS 336 (351)
Q Consensus 282 --~~~-~----------~~--~~~~~~l~~~gV~~~~~~v~~v~~~~--v~~~~g~~--~~~D~vi~a~G~~p~ 336 (351)
++. . +. ..+.+.+++.||+++.+++..++.+. |.+.+|++ +.+|.+|+|||.+|.
T Consensus 72 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~v~~~~g~v~~id~~~~~V~~~~g~~~~~~~d~lviAtG~~p~ 145 (466)
T 3l8k_A 72 IPLDFSTVQDRKDYVQELRFKQHKRNMSQYETLTFYKGYVKIKDPTHVIVKTDEGKEIEAETRYMIIASGAETA 145 (466)
T ss_dssp CCCCHHHHHHHHHHHHHHHHHHHHHHHTTCTTEEEESEEEEEEETTEEEEEETTSCEEEEEEEEEEECCCEEEC
T ss_pred CCcCHHHHHHHHHhheeccccchHHHHHHhCCCEEEEeEEEEecCCeEEEEcCCCcEEEEecCEEEECCCCCcc
Confidence 110 0 01 33444566779999999888888764 44567878 999999999998776
No 241
>1s3e_A Amine oxidase [flavin-containing] B; human monoamine oxidase, inhibitor binding, rasagiline, enantioselectivity, oxidoreductase; HET: FAD RHP; 1.60A {Homo sapiens} SCOP: c.3.1.2 d.16.1.5 PDB: 1gos_A* 1oj9_A* 1ojb_A* 1ojc_A* 1ojd_A* 1s2q_A* 1s2y_A* 1oja_A* 1s3b_A* 2bk3_A* 2byb_A* 2c64_A* 2c65_A* 2c66_A* 2c67_A* 2c70_A* 2v5z_A* 2v60_A* 2v61_A* 2vrl_A* ...
Probab=98.13 E-value=1.5e-06 Score=83.67 Aligned_cols=37 Identities=32% Similarity=0.405 Sum_probs=34.3
Q ss_pred CCcEEEECCchhHHHHHHhhhccCceEEEEcCCCccc
Q 018704 62 KPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRNHMV 98 (351)
Q Consensus 62 ~~~VvIIG~G~aGl~aA~~L~~~g~~v~vie~~~~~~ 98 (351)
.+||+|||||++||+||..|++.|++|+|+|++++..
T Consensus 4 ~~~vvIIGaG~aGL~aA~~L~~~G~~V~vlE~~~~~G 40 (520)
T 1s3e_A 4 KCDVVVVGGGISGMAAAKLLHDSGLNVVVLEARDRVG 40 (520)
T ss_dssp BCSEEEECCBHHHHHHHHHHHHTTCCEEEECSSSSSB
T ss_pred CceEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCCCC
Confidence 4799999999999999999999999999999988753
No 242
>1rsg_A FMS1 protein; FAD binding motif, oxidoreductase; HET: FAD; 1.90A {Saccharomyces cerevisiae} PDB: 1z6l_A* 3bi2_A* 3bi4_A* 3bi5_A* 3bnm_B* 3bnu_B* 3cn8_B* 3cnd_B* 3cnp_B* 3cns_A* 3cnt_B* 1yy5_A* 1xpq_A*
Probab=98.13 E-value=1e-06 Score=84.76 Aligned_cols=37 Identities=22% Similarity=0.452 Sum_probs=34.2
Q ss_pred CCcEEEECCchhHHHHHHhhhccC-ceEEEEcCCCccc
Q 018704 62 KPRVVVLGSGWAGCRLMKGIDTSL-YDVVCVSPRNHMV 98 (351)
Q Consensus 62 ~~~VvIIG~G~aGl~aA~~L~~~g-~~v~vie~~~~~~ 98 (351)
.+||+|||||++||+||+.|++.| ++|+|+|++++..
T Consensus 8 ~~~VvIIGaG~aGL~AA~~L~~~G~~~V~VlEa~~riG 45 (516)
T 1rsg_A 8 KKKVIIIGAGIAGLKAASTLHQNGIQDCLVLEARDRVG 45 (516)
T ss_dssp EEEEEEECCBHHHHHHHHHHHHTTCCSEEEECSSSSSB
T ss_pred CCcEEEECCCHHHHHHHHHHHhcCCCCEEEEeCCCCCC
Confidence 479999999999999999999999 9999999988754
No 243
>4dna_A Probable glutathione reductase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; HET: FAD; 2.80A {Sinorhizobium meliloti}
Probab=98.12 E-value=5.1e-06 Score=78.74 Aligned_cols=91 Identities=23% Similarity=0.283 Sum_probs=69.8
Q ss_pred eEEEECCChHHHHHHHHHHHHHHHHHHhhhcCCCCccEEEEEeCCCCCC-------------------------------
Q 018704 232 HCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEILS------------------------------- 280 (351)
Q Consensus 232 ~v~VvGgG~~a~e~a~~l~~~~~~~~~~~~~~~~~~~~v~~~~~~~~l~------------------------------- 280 (351)
+|+|||||+.|+-+|..|++.| .+|++++++.+-.
T Consensus 7 DVvVIGaG~aGl~aA~~la~~G--------------~~V~liEk~~~GG~~~~~gcip~k~l~~~~~~~~~~~~~~~~g~ 72 (463)
T 4dna_A 7 DLFVIGGGSGGVRSGRLAAALG--------------KKVAIAEEFRYGGTCVIRGCVPKKLYVYASQFAEHFEDAAGFGW 72 (463)
T ss_dssp EEEEECCSHHHHHHHHHHHTTT--------------CCEEEEESSCTTHHHHHHSHHHHHHHHHHHHHHHHHHHGGGGTE
T ss_pred cEEEECcCHHHHHHHHHHHhCC--------------CEEEEEeCCCCCCcccccCchhhHHHHHHHHHHHHHHHHHhcCc
Confidence 7999999999999999999876 8999999853210
Q ss_pred -----CCcH------------HHHHHHHHHhhhcCcEEEcCeEEEEeCCeEEe-cCCcEEeccEEEEecCCCCc
Q 018704 281 -----SFDD------------RLRHYATTQLSKSGVRLVRGIVKDVDSQKLIL-NDGTEVPYGLLVWSTGVGPS 336 (351)
Q Consensus 281 -----~~~~------------~~~~~~~~~l~~~gV~~~~~~v~~v~~~~v~~-~~g~~~~~D~vi~a~G~~p~ 336 (351)
.++. .+...+.+.+++.+|+++.+++..++...+.+ .+++++.+|.+|+|||.+|.
T Consensus 73 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~g~~~~i~~~~v~~~~~~~~~~~d~lviAtG~~p~ 146 (463)
T 4dna_A 73 TVGESRFDWAKLVAAKEQEIARLEGLYRKGLANAGAEILDTRAELAGPNTVKLLASGKTVTAERIVIAVGGHPS 146 (463)
T ss_dssp EECCCEECHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEESCEEESSSSEEEETTTTEEEEEEEEEECCCEEEC
T ss_pred ccCCCCcCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEEEEEEeeCCEEEEecCCeEEEeCEEEEecCCCcc
Confidence 0110 12223444566779999999888887788888 57888999999999997665
No 244
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=98.12 E-value=2.3e-06 Score=81.99 Aligned_cols=92 Identities=14% Similarity=0.303 Sum_probs=64.4
Q ss_pred CeEEEECCChHHHHHHHHHHHHHHHHHHhhhcCCCCccEEEEEeCCCC---CC--------CCcH-HHHHHHHHHh--hh
Q 018704 231 LHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEI---LS--------SFDD-RLRHYATTQL--SK 296 (351)
Q Consensus 231 ~~v~VvGgG~~a~e~a~~l~~~~~~~~~~~~~~~~~~~~v~~~~~~~~---l~--------~~~~-~~~~~~~~~l--~~ 296 (351)
++|+|||||..|+.+|..|.+.+ .+|++|++++. .| .+++ .+...+.+.+ +.
T Consensus 43 prVVIIGgG~AGl~~A~~L~~~~--------------~~VtLId~~~~~~~~PlL~~va~G~l~~~~i~~p~~~~~~~~~ 108 (502)
T 4g6h_A 43 PNVLILGSGWGAISFLKHIDTKK--------------YNVSIISPRSYFLFTPLLPSAPVGTVDEKSIIEPIVNFALKKK 108 (502)
T ss_dssp CEEEEECSSHHHHHHHHHSCTTT--------------CEEEEEESSSEEECGGGGGGTTTTSSCGGGGEEEHHHHHTTCS
T ss_pred CCEEEECCcHHHHHHHHHhhhCC--------------CcEEEECCCCCcccccchhHHhhccccHHHhhhhHHHHHHhhc
Confidence 48999999999999998886533 89999999742 11 1111 1111122222 34
Q ss_pred cCcEEEcCeEEEEeC--CeEEe--------------------cCCcEEeccEEEEecCCCCc
Q 018704 297 SGVRLVRGIVKDVDS--QKLIL--------------------NDGTEVPYGLLVWSTGVGPS 336 (351)
Q Consensus 297 ~gV~~~~~~v~~v~~--~~v~~--------------------~~g~~~~~D~vi~a~G~~p~ 336 (351)
.+++++.++|++++. ..|.+ .++.++++|.+|+|||..|+
T Consensus 109 ~~v~~~~~~v~~ID~~~k~V~l~~~~~~~~~~~~~~~~~~~~~~~~~i~YD~LViAtGs~~~ 170 (502)
T 4g6h_A 109 GNVTYYEAEATSINPDRNTVTIKSLSAVSQLYQPENHLGLHQAEPAEIKYDYLISAVGAEPN 170 (502)
T ss_dssp SCEEEEEEEEEEEEGGGTEEEEEEEEEEEECSSSCCCCCCCTTCCEEEECSEEEECCCCEEC
T ss_pred CCeEEEEEEEEEEEhhhCEEEEeecccceeecccccccccccCCceEEeCCEEEEcCCcccc
Confidence 589999999988865 34544 24668999999999999887
No 245
>4gcm_A TRXR, thioredoxin reductase; FAD/NAD-linked reductases, PYR redox 2 family, structural GE joint center for structural genomics, JCSG; HET: MSE FAD NAP EPE; 1.80A {Staphylococcus aureus subsp}
Probab=98.12 E-value=1.4e-05 Score=71.41 Aligned_cols=91 Identities=20% Similarity=0.192 Sum_probs=68.5
Q ss_pred eEEEECCChHHHHHHHHHHHHHHHHHHhhhcCCCCccEEEEEeCCCC----C--------CCC----cHHHHHHHHHHhh
Q 018704 232 HCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEI----L--------SSF----DDRLRHYATTQLS 295 (351)
Q Consensus 232 ~v~VvGgG~~a~e~a~~l~~~~~~~~~~~~~~~~~~~~v~~~~~~~~----l--------~~~----~~~~~~~~~~~l~ 295 (351)
.|+|||||+.|+.+|..+++.+ .+|++++++.+ + +.+ .+++.....+...
T Consensus 8 DvvIIG~GpAGl~aA~~l~~~g--------------~~V~liE~~~~gG~~~~~~~i~~~p~~~~~~~~~~~~~~~~~~~ 73 (312)
T 4gcm_A 8 DIAIIGAGPAGMTAAVYASRAN--------------LKTVMIERGIPGGQMANTEEVENFPGFEMITGPDLSTKMFEHAK 73 (312)
T ss_dssp EEEEECCSHHHHHHHHHHHHTT--------------CCEEEEESSCTTGGGGGCSCBCCSTTCSSBCHHHHHHHHHHHHH
T ss_pred CEEEECCCHHHHHHHHHHHHCC--------------CCEEEEecCCCCCeeecccccCCcCCccccchHHHHHHHHHHHh
Confidence 7999999999999999999887 89999998532 1 211 2455666666677
Q ss_pred hcCcEEEcCe-EEEEe--CCeEEecCCcEEeccEEEEecCCCCc
Q 018704 296 KSGVRLVRGI-VKDVD--SQKLILNDGTEVPYGLLVWSTGVGPS 336 (351)
Q Consensus 296 ~~gV~~~~~~-v~~v~--~~~v~~~~g~~~~~D~vi~a~G~~p~ 336 (351)
+.++.+..+. +.... ...+...+++++.+|.+|+|||.+|.
T Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~liiAtGs~~~ 117 (312)
T 4gcm_A 74 KFGAVYQYGDIKSVEDKGEYKVINFGNKELTAKAVIIATGAEYK 117 (312)
T ss_dssp HTTCEEEECCCCEEEECSSCEEEECSSCEEEEEEEEECCCEEEC
T ss_pred hccccccceeeeeeeeeecceeeccCCeEEEeceeEEcccCccC
Confidence 7788877773 33322 34666778889999999999998876
No 246
>2gmh_A Electron transfer flavoprotein-ubiquinone oxidoreductase; HET: BHG FAD UQ5; 2.50A {Sus scrofa} SCOP: c.3.1.2 d.16.1.8 d.58.1.6 PDB: 2gmj_A*
Probab=98.11 E-value=2.3e-06 Score=83.50 Aligned_cols=38 Identities=26% Similarity=0.347 Sum_probs=34.0
Q ss_pred CCCCcEEEECCchhHHHHHHhhhcc------CceEEEEcCCCcc
Q 018704 60 NEKPRVVVLGSGWAGCRLMKGIDTS------LYDVVCVSPRNHM 97 (351)
Q Consensus 60 ~~~~~VvIIG~G~aGl~aA~~L~~~------g~~v~vie~~~~~ 97 (351)
.+.+||+|||||+|||++|+.|++. |++|+|||+.+..
T Consensus 33 ~~~~DVvIVGaG~aGlaaA~~La~~~~~~~~G~~V~vlEk~~~~ 76 (584)
T 2gmh_A 33 AEEADVVIVGAGPAGLSAATRLKQLAAQHEKDLRVCLVEKAAHI 76 (584)
T ss_dssp EEECSEEEECCSHHHHHHHHHHHHHHHHTTCCCCEEEECSSSST
T ss_pred ccCCCEEEECcCHHHHHHHHHHHhcccccCCCCcEEEEeCCCCC
Confidence 3458999999999999999999998 9999999987653
No 247
>1zk7_A HGII, reductase, mercuric reductase; mercuric ION reductase, oxidoreductase; HET: FAD; 1.60A {Pseudomonas aeruginosa} PDB: 1zx9_A*
Probab=98.11 E-value=3.6e-06 Score=79.87 Aligned_cols=98 Identities=17% Similarity=0.155 Sum_probs=68.0
Q ss_pred CCcEEEECCchhHHHHHHhhhccCceEEEEcCCCccccchhhhhhhcccccccccccchhccchhhhcCCCeEEEE-EEe
Q 018704 62 KPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRNHMVFTPLLASTCVGTLEFRSVAEPIARIQPAISREPGSYFFL-SHC 140 (351)
Q Consensus 62 ~~~VvIIG~G~aGl~aA~~L~~~g~~v~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~v 140 (351)
..+|+|||||+.|+.+|..|++.|.+|+++++.+.+.- . ...+...........++.++. .+|
T Consensus 176 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~---~-------------~~~~~~~l~~~l~~~Gv~i~~~~~v 239 (467)
T 1zk7_A 176 PERLAVIGSSVVALELAQAFARLGSKVTVLARNTLFFR---E-------------DPAIGEAVTAAFRAEGIEVLEHTQA 239 (467)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCTTTT---S-------------CHHHHHHHHHHHHHTTCEEETTCCE
T ss_pred CCEEEEECCCHHHHHHHHHHHHcCCEEEEEEECCccCC---C-------------CHHHHHHHHHHHHhCCCEEEcCCEE
Confidence 47899999999999999999999999999999775320 0 011111222223334677664 477
Q ss_pred eeEeCCCCEEEEEeecCccccCCCceeEeeccEEEEecCCCcCCC
Q 018704 141 AGIDTDNHVVHCETVTDELRTLEPWKFKISYDKLVIALGAEASTF 185 (351)
Q Consensus 141 ~~i~~~~~~v~~~~~~~~~~~~~~~~~~~~~d~lviAtG~~p~~p 185 (351)
..++.+...+.+.. ++. ++.+|.||+|+|..|...
T Consensus 240 ~~i~~~~~~~~v~~--~~~--------~i~aD~Vv~a~G~~p~~~ 274 (467)
T 1zk7_A 240 SQVAHMDGEFVLTT--THG--------ELRADKLLVATGRTPNTR 274 (467)
T ss_dssp EEEEEETTEEEEEE--TTE--------EEEESEEEECSCEEESCT
T ss_pred EEEEEeCCEEEEEE--CCc--------EEEcCEEEECCCCCcCCC
Confidence 77776655554433 233 799999999999987754
No 248
>2jae_A L-amino acid oxidase; oxidoreductase, dimerisation mode, hydride transfer mechanism, GR2-family, flavoenzyme, FAD containing; HET: FAD; 1.25A {Rhodococcus opacus} PDB: 2jb1_A* 2jb2_A* 2jb3_A*
Probab=98.10 E-value=2.3e-06 Score=81.65 Aligned_cols=37 Identities=30% Similarity=0.336 Sum_probs=34.3
Q ss_pred CCCcEEEECCchhHHHHHHhhhccCceEEEEcCCCcc
Q 018704 61 EKPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRNHM 97 (351)
Q Consensus 61 ~~~~VvIIG~G~aGl~aA~~L~~~g~~v~vie~~~~~ 97 (351)
..+||+|||||++||+||+.|++.|++|+|+|+.+..
T Consensus 10 ~~~~v~IIGaG~aGl~aA~~L~~~g~~v~v~E~~~~~ 46 (489)
T 2jae_A 10 GSHSVVVLGGGPAGLCSAFELQKAGYKVTVLEARTRP 46 (489)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSS
T ss_pred CCCCEEEECCCHHHHHHHHHHHHCCCCEEEEeccCCC
Confidence 4579999999999999999999999999999998765
No 249
>3uox_A Otemo; baeyer-villiger monooxygenase, oxidoreductase; HET: FAD; 1.96A {Pseudomonas putida} PDB: 3uov_A* 3uoy_A* 3uoz_A* 3up4_A* 3up5_A*
Probab=98.10 E-value=1.1e-05 Score=77.90 Aligned_cols=92 Identities=22% Similarity=0.244 Sum_probs=69.7
Q ss_pred CeEEEECCChHHHHHHHHHHHHHHHHHHhhhcCCCCccEEEEEeCCCCC---------C---------------------
Q 018704 231 LHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEIL---------S--------------------- 280 (351)
Q Consensus 231 ~~v~VvGgG~~a~e~a~~l~~~~~~~~~~~~~~~~~~~~v~~~~~~~~l---------~--------------------- 280 (351)
.+|+|||||.+|+.+|..|.+.+ .+|++++++..+ |
T Consensus 10 ~dVvIIGaG~aGl~aA~~L~~~g--------------~~v~iiE~~~~~GGtw~~~~yPg~~~d~~~~~y~~~f~~~~~~ 75 (545)
T 3uox_A 10 LDAVVIGAGVTGIYQAFLINQAG--------------MKVLGIEAGEDVGGTWYWNRYPGCRLDTESYAYGYFALKGIIP 75 (545)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTT--------------CCEEEECSSSSSCTHHHHCCCTTCBCSSCHHHHCHHHHTTSST
T ss_pred CCEEEECccHHHHHHHHHHHhCC--------------CCEEEEeCCCCCCCccccCCCCceeecCchhhcccccCccccc
Confidence 38999999999999999998765 789999986311 0
Q ss_pred --C------CcHHHHHHHHHHhhhcCc--EEEcC-eEEEEeC--C----eEEecCCcEEeccEEEEecC--CCCc
Q 018704 281 --S------FDDRLRHYATTQLSKSGV--RLVRG-IVKDVDS--Q----KLILNDGTEVPYGLLVWSTG--VGPS 336 (351)
Q Consensus 281 --~------~~~~~~~~~~~~l~~~gV--~~~~~-~v~~v~~--~----~v~~~~g~~~~~D~vi~a~G--~~p~ 336 (351)
. ..+++...+.+.+++.++ .++.+ +|.+++- + .|.+.+|+++.+|.||+|+| ..|.
T Consensus 76 ~~~~~~~~~~~~ei~~yl~~~~~~~~l~~~i~~~~~V~~~~~~~~~~~w~V~~~~G~~~~ad~lV~AtG~~s~p~ 150 (545)
T 3uox_A 76 EWEWSENFASQPEMLRYVNRAADAMDVRKHYRFNTRVTAARYVENDRLWEVTLDNEEVVTCRFLISATGPLSASR 150 (545)
T ss_dssp TCCCSBSSCBHHHHHHHHHHHHHHHTCGGGEECSCCEEEEEEEGGGTEEEEEETTTEEEEEEEEEECCCSCBC--
T ss_pred CCCccccCCCHHHHHHHHHHHHHHcCCcCcEEECCEEEEEEEeCCCCEEEEEECCCCEEEeCEEEECcCCCCCCc
Confidence 0 124566777777777787 78888 4877752 3 68888999999999999999 4554
No 250
>3gwf_A Cyclohexanone monooxygenase; flavoprotein biocatalysis baeyer-villiger oxidation green CH monooxygenase, oxidoreductase; HET: FAD NAP; 2.20A {Rhodococcus SP} PDB: 3gwd_A* 3ucl_A*
Probab=98.10 E-value=1.1e-05 Score=77.87 Aligned_cols=89 Identities=15% Similarity=0.240 Sum_probs=69.3
Q ss_pred CeEEEECCChHHHHHHHHHH-HHHHHHHHhhhcCCCCccEEEEEeCCCCC---------CC-------------C-----
Q 018704 231 LHCVVVGGGPTGVEFSGELS-DFIMRDVRQRYSHVKDYIHVTLIEANEIL---------SS-------------F----- 282 (351)
Q Consensus 231 ~~v~VvGgG~~a~e~a~~l~-~~~~~~~~~~~~~~~~~~~v~~~~~~~~l---------~~-------------~----- 282 (351)
.+|+|||||.+|+.+|..|. +.| .+|+++++...+ +. +
T Consensus 9 ~dVvIIGaG~aGl~aA~~L~~~~G--------------~~v~viE~~~~~GGtw~~~~ypg~~~d~~s~~~~~~~~~~~~ 74 (540)
T 3gwf_A 9 VDAVVIGAGFGGIYAVHKLHHELG--------------LTTVGFDKADGPGGTWYWNRYPGALSDTESHLYRFSFDRDLL 74 (540)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTC--------------CCEEEEESSSSSCTHHHHCCCTTCEEEEEGGGSSCCSCHHHH
T ss_pred CCEEEECcCHHHHHHHHHHHHcCC--------------CCEEEEECCCCCCCcccccCCCCceecCCcceeeeccccccc
Confidence 38999999999999999998 655 799999985311 11 0
Q ss_pred -----------cHHHHHHHHHHhhhcCc--EEEcCe-EEEEe--CC----eEEecCCcEEeccEEEEecCC
Q 018704 283 -----------DDRLRHYATTQLSKSGV--RLVRGI-VKDVD--SQ----KLILNDGTEVPYGLLVWSTGV 333 (351)
Q Consensus 283 -----------~~~~~~~~~~~l~~~gV--~~~~~~-v~~v~--~~----~v~~~~g~~~~~D~vi~a~G~ 333 (351)
.+++.+.+.+.+++.|+ +++.+. |++++ ++ .|.+.+|+++.+|.||+|+|.
T Consensus 75 ~~~~~~~~~~~~~ei~~~l~~~~~~~g~~~~i~~~~~V~~i~~~~~~~~~~V~~~~G~~i~ad~lV~AtG~ 145 (540)
T 3gwf_A 75 QESTWKTTYITQPEILEYLEDVVDRFDLRRHFKFGTEVTSALYLDDENLWEVTTDHGEVYRAKYVVNAVGL 145 (540)
T ss_dssp HHCCCSBSEEEHHHHHHHHHHHHHHTTCGGGEEESCCEEEEEEETTTTEEEEEETTSCEEEEEEEEECCCS
T ss_pred cCCCCcccCCCHHHHHHHHHHHHHHcCCcceeEeccEEEEEEEeCCCCEEEEEEcCCCEEEeCEEEECCcc
Confidence 13566777777888888 788884 88775 23 678889989999999999995
No 251
>2vdc_G Glutamate synthase [NADPH] small chain; oxidoreductase, amidotransferase, ammonia assimilation, iron, zymogen; HET: OMT FMN AKG FAD; 9.50A {Azospirillum brasilense}
Probab=98.10 E-value=3e-06 Score=80.12 Aligned_cols=89 Identities=18% Similarity=0.187 Sum_probs=67.9
Q ss_pred cccCeEEEECCChHHHHHHHHHHHHHHHHHHhhhcCCCCccEEEEEeCCCC--------CCC--CcHHHHHHHHHHhhhc
Q 018704 228 SRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEI--------LSS--FDDRLRHYATTQLSKS 297 (351)
Q Consensus 228 ~~~~~v~VvGgG~~a~e~a~~l~~~~~~~~~~~~~~~~~~~~v~~~~~~~~--------l~~--~~~~~~~~~~~~l~~~ 297 (351)
...++|+|||||+.|+.+|..|.+.| .+|+++++.+. ++. ++.++.....+.+++.
T Consensus 120 ~~~~~V~IIGgGpAGl~aA~~L~~~G--------------~~V~v~e~~~~~GG~l~~gip~~~~~~~~~~~~~~~l~~~ 185 (456)
T 2vdc_G 120 ELGLSVGVIGAGPAGLAAAEELRAKG--------------YEVHVYDRYDRMGGLLVYGIPGFKLEKSVVERRVKLLADA 185 (456)
T ss_dssp SCCCCEEEECCSHHHHHHHHHHHHHT--------------CCEEEECSSSSCSTHHHHTSCTTTSCHHHHHHHHHHHHHT
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHCC--------------CeEEEEeccCCCCCeeeecCCCccCCHHHHHHHHHHHHHC
Confidence 35579999999999999999999877 88999999742 232 3456777777888899
Q ss_pred CcEEEcCeEEEEeCCeEEecCCcEEeccEEEEecCCC
Q 018704 298 GVRLVRGIVKDVDSQKLILNDGTEVPYGLLVWSTGVG 334 (351)
Q Consensus 298 gV~~~~~~v~~v~~~~v~~~~g~~~~~D~vi~a~G~~ 334 (351)
||+++.+.... ..+.++++ .+++|.||+|||..
T Consensus 186 gv~~~~~~~v~---~~v~~~~~-~~~~d~vvlAtG~~ 218 (456)
T 2vdc_G 186 GVIYHPNFEVG---RDASLPEL-RRKHVAVLVATGVY 218 (456)
T ss_dssp TCEEETTCCBT---TTBCHHHH-HSSCSEEEECCCCC
T ss_pred CcEEEeCCEec---cEEEhhHh-HhhCCEEEEecCCC
Confidence 99999996321 22334333 36799999999986
No 252
>3s5w_A L-ornithine 5-monooxygenase; class B flavin dependent N-hydroxylating monooxygenase, CLAS flavin dependent monooxygenase N-hydroxylating; HET: FAD ONH NAP; 1.90A {Pseudomonas aeruginosa} PDB: 3s61_A*
Probab=98.10 E-value=1e-05 Score=76.50 Aligned_cols=96 Identities=17% Similarity=0.178 Sum_probs=67.8
Q ss_pred eEEEECCChHHHHHHHHHHHHHHHHHHhhhcCCCCccEEEEEeCCCCCC--------C----------------------
Q 018704 232 HCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEILS--------S---------------------- 281 (351)
Q Consensus 232 ~v~VvGgG~~a~e~a~~l~~~~~~~~~~~~~~~~~~~~v~~~~~~~~l~--------~---------------------- 281 (351)
+|+|||||++|+-+|..|.+.+.+. .. .+|+++++.+.+. .
T Consensus 32 dVvIIGaG~aGl~aA~~L~~~g~~~--------~~-~~v~liE~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~p~~~~~ 102 (463)
T 3s5w_A 32 DLIGVGFGPSNIALAIALQERAQAQ--------GA-LEVLFLDKQGDYRWHGNTLVSQSELQISFLKDLVSLRNPTSPYS 102 (463)
T ss_dssp SEEEECCSHHHHHHHHHHHHHHHHH--------CC-CCEEEEESCSSCCSSGGGCCSSCBCSSCTTSSSSTTTCTTCTTS
T ss_pred CEEEECCCHHHHHHHHHHHhccccc--------Cc-ccEEEEecCCCCCCcCCCCCCCCcCCcchhhccccccCCCCCCC
Confidence 7999999999999999999876210 00 4799998864110 0
Q ss_pred ----------------------CcHHHHHHHHHHhhhcCcEEEcCe-EEEEeCC---------eEEecCCc----EEecc
Q 018704 282 ----------------------FDDRLRHYATTQLSKSGVRLVRGI-VKDVDSQ---------KLILNDGT----EVPYG 325 (351)
Q Consensus 282 ----------------------~~~~~~~~~~~~l~~~gV~~~~~~-v~~v~~~---------~v~~~~g~----~~~~D 325 (351)
...++.+.+....++.+++++.+. |++++.+ .|.+.+|. ++.+|
T Consensus 103 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~i~~~~~V~~i~~~~~~~~~~~~~V~~~~g~g~~~~~~~d 182 (463)
T 3s5w_A 103 FVNYLHKHDRLVDFINLGTFYPCRMEFNDYLRWVASHFQEQSRYGEEVLRIEPMLSAGQVEALRVISRNADGEELVRTTR 182 (463)
T ss_dssp HHHHHHHTTCHHHHHHHCCSCCBHHHHHHHHHHHHTTCTTTEEESEEEEEEEEEEETTEEEEEEEEEEETTSCEEEEEES
T ss_pred hhHhhhhcCceeecccccCCCCCHHHHHHHHHHHHHHcCCeEEeCCEEEEEEEecCCCceEEEEEEEecCCCceEEEEeC
Confidence 012333445555666689999995 8887642 45566665 79999
Q ss_pred EEEEecCCCCc
Q 018704 326 LLVWSTGVGPS 336 (351)
Q Consensus 326 ~vi~a~G~~p~ 336 (351)
.||+|||..|.
T Consensus 183 ~lVlAtG~~p~ 193 (463)
T 3s5w_A 183 ALVVSPGGTPR 193 (463)
T ss_dssp EEEECCCCEEC
T ss_pred EEEECCCCCCC
Confidence 99999998776
No 253
>3dk9_A Grase, GR, glutathione reductase; flavoenzyme, nicotinamide, acetylation, alternative initiation, cytoplasm, FAD, flavoprotein, mitochondrion, NADP; HET: SO4 FAD; 0.95A {Homo sapiens} PDB: 1bwc_A* 1gra_A* 1gre_A* 1grf_A* 1grh_A* 1grb_A* 2gh5_A* 1gsn_A* 3dk4_A* 3dk8_A* 3djj_A* 3grs_A* 3sqp_A* 4gr1_A* 2aaq_A* 1dnc_A* 1grg_A* 1grt_A* 1xan_A* 5grt_A* ...
Probab=98.09 E-value=7.3e-06 Score=77.99 Aligned_cols=105 Identities=14% Similarity=0.091 Sum_probs=67.9
Q ss_pred CCcEEEECCchhHHHHHHhhhccCceEEEEcCCCccccchhhhhhhcccccccccccchhccchhhhcCCCeEEEE-EEe
Q 018704 62 KPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRNHMVFTPLLASTCVGTLEFRSVAEPIARIQPAISREPGSYFFL-SHC 140 (351)
Q Consensus 62 ~~~VvIIG~G~aGl~aA~~L~~~g~~v~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~v 140 (351)
..+|+|||||+.|+.+|..|++.|.+|+++++.+.+. + .+...+.+.........++.++. ..+
T Consensus 187 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l--~-------------~~d~~~~~~~~~~l~~~gv~i~~~~~v 251 (478)
T 3dk9_A 187 PGRSVIVGAGYIAVEMAGILSALGSKTSLMIRHDKVL--R-------------SFDSMISTNCTEELENAGVEVLKFSQV 251 (478)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSC--T-------------TSCHHHHHHHHHHHHHTTCEEETTEEE
T ss_pred CccEEEECCCHHHHHHHHHHHHcCCeEEEEEeCCccc--c-------------ccCHHHHHHHHHHHHHCCCEEEeCCEE
Confidence 4789999999999999999999999999999977632 0 01111222222223344677665 477
Q ss_pred eeEeCCCCE--EEEEeecC--ccccCCCceeEeeccEEEEecCCCcCCC
Q 018704 141 AGIDTDNHV--VHCETVTD--ELRTLEPWKFKISYDKLVIALGAEASTF 185 (351)
Q Consensus 141 ~~i~~~~~~--v~~~~~~~--~~~~~~~~~~~~~~d~lviAtG~~p~~p 185 (351)
..++.+... +.+...+. ++. ....+.+|.||+|+|..|...
T Consensus 252 ~~i~~~~~~~~~~v~~~~~~~g~~----~g~~~~~D~vi~a~G~~p~~~ 296 (478)
T 3dk9_A 252 KEVKKTLSGLEVSMVTAVPGRLPV----MTMIPDVDCLLWAIGRVPNTK 296 (478)
T ss_dssp EEEEECSSSEEEEEEECCTTSCCE----EEEEEEESEEEECSCEEESCT
T ss_pred EEEEEcCCCcEEEEEEccCCCCcc----cceEEEcCEEEEeeccccCCC
Confidence 777754332 44432221 110 002789999999999987765
No 254
>1mo9_A ORF3; nucleotide binding motifs, nucleotide binding domain, oxidor; HET: FAD KPC; 1.65A {Xanthobacter autotrophicus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1mok_A* 2c3c_A* 2c3d_A* 3q6j_A*
Probab=98.09 E-value=1.5e-05 Score=76.77 Aligned_cols=91 Identities=15% Similarity=0.218 Sum_probs=69.1
Q ss_pred CeEEEECCChHHHHHHHHHHHHHHHHHHhhhcCCCCccEEEEEeCCCCCCC-----------------------------
Q 018704 231 LHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEILSS----------------------------- 281 (351)
Q Consensus 231 ~~v~VvGgG~~a~e~a~~l~~~~~~~~~~~~~~~~~~~~v~~~~~~~~l~~----------------------------- 281 (351)
.+|+|||||..|+.+|..|.+.+ .+|++++++..+.+
T Consensus 44 ~dVvIIGgG~aGl~aA~~l~~~G--------------~~V~liE~~~~~GG~~~~~g~~p~k~l~~~~~~~~~~~~~~~~ 109 (523)
T 1mo9_A 44 YDAIFIGGGAAGRFGSAYLRAMG--------------GRQLIVDRWPFLGGSCPHNACVPHHLFSDCAAELMLARTFSGQ 109 (523)
T ss_dssp BSEEEECCSHHHHHHHHHHHHTT--------------CCEEEEESSSSSSCHHHHHSHHHHHHHHHHHHHHHHHHHTTTS
T ss_pred CCEEEECCCHHHHHHHHHHHHCC--------------CCEEEEeCCCCCCCcccccCcCchHHHHHHHHHHHHHhhhhhc
Confidence 58999999999999999999876 89999999762110
Q ss_pred -----C------cHHHHHHHH-------HHh-----hhcCcEEE-cCeEEEEeCCeEEecCCcEEeccEEEEecCCCCc
Q 018704 282 -----F------DDRLRHYAT-------TQL-----SKSGVRLV-RGIVKDVDSQKLILNDGTEVPYGLLVWSTGVGPS 336 (351)
Q Consensus 282 -----~------~~~~~~~~~-------~~l-----~~~gV~~~-~~~v~~v~~~~v~~~~g~~~~~D~vi~a~G~~p~ 336 (351)
+ ...+...+. +.+ ++.||+++ .+++..++...+.+. |.++.+|.+|+|||.+|.
T Consensus 110 g~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~gv~~~~~~~v~~i~~~~v~~~-g~~~~~d~lViATGs~p~ 187 (523)
T 1mo9_A 110 YWFPDMTEKVVGIKEVVDLFRAGRNGPHGIMNFQSKEQLNLEYILNCPAKVIDNHTVEAA-GKVFKAKNLILAVGAGPG 187 (523)
T ss_dssp TTCCCCTTCCCCHHHHHHHHHHHTHHHHHHHHHHHHHTSCCCEEESSCCEEEETTEEEET-TEEEEBSCEEECCCEECC
T ss_pred CcHHHHHhhhhhHHHHHHHHHhhhhhhhhhhhhcccccCCcEEEEeeEEEEeeCCEEEEC-CEEEEeCEEEECCCCCCC
Confidence 0 111222221 344 67799999 667888887788886 778999999999998877
No 255
>1m6i_A Programmed cell death protein 8; apoptosis, AIF, oxidoreductase; HET: FAD; 1.80A {Homo sapiens} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 3gd3_A* 3gd4_A* 1gv4_A*
Probab=98.08 E-value=7.3e-06 Score=78.34 Aligned_cols=101 Identities=16% Similarity=0.228 Sum_probs=68.3
Q ss_pred CCcEEEECCchhHHHHHHhhhc----cCceEEEEcCCCccccchhhhhhhcccccccccccchhccchhhhcCCCeEEEE
Q 018704 62 KPRVVVLGSGWAGCRLMKGIDT----SLYDVVCVSPRNHMVFTPLLASTCVGTLEFRSVAEPIARIQPAISREPGSYFFL 137 (351)
Q Consensus 62 ~~~VvIIG~G~aGl~aA~~L~~----~g~~v~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 137 (351)
..+|+|||||+.|+.+|..|++ .|.+|+++++.+...-. . +...+...........++.++.
T Consensus 180 ~~~vvViGgG~iG~E~A~~l~~~~~~~g~~V~~v~~~~~~~~~---------~-----l~~~~~~~~~~~l~~~GV~v~~ 245 (493)
T 1m6i_A 180 VKSITIIGGGFLGSELACALGRKARALGTEVIQLFPEKGNMGK---------I-----LPEYLSNWTMEKVRREGVKVMP 245 (493)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHHHHHHTCEEEEECSSSSTTTT---------T-----SCHHHHHHHHHHHHTTTCEEEC
T ss_pred CCeEEEECCCHHHHHHHHHHHhhhhhcCCEEEEEecCcccccc---------c-----CCHHHHHHHHHHHHhcCCEEEe
Confidence 4789999999999999999976 57899999986542100 0 0011122222234455777766
Q ss_pred E-EeeeEeCCCCEEEEEeecCccccCCCceeEeeccEEEEecCCCcCCC
Q 018704 138 S-HCAGIDTDNHVVHCETVTDELRTLEPWKFKISYDKLVIALGAEASTF 185 (351)
Q Consensus 138 ~-~v~~i~~~~~~v~~~~~~~~~~~~~~~~~~~~~d~lviAtG~~p~~p 185 (351)
. .|+.++.+...+.+. +.+|+ ++.+|.||+|+|..|+..
T Consensus 246 ~~~V~~i~~~~~~~~v~-l~dG~--------~i~aD~Vv~a~G~~pn~~ 285 (493)
T 1m6i_A 246 NAIVQSVGVSSGKLLIK-LKDGR--------KVETDHIVAAVGLEPNVE 285 (493)
T ss_dssp SCCEEEEEEETTEEEEE-ETTSC--------EEEESEEEECCCEEECCT
T ss_pred CCEEEEEEecCCeEEEE-ECCCC--------EEECCEEEECCCCCccHH
Confidence 5 788887655554443 24666 899999999999987754
No 256
>1dxl_A Dihydrolipoamide dehydrogenase; oxidoreductase, multienzyme complex protein, pyruvate dehydrogenase complex, glycine decarboxylase complex; HET: FAD; 3.15A {Pisum sativum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.08 E-value=2.1e-05 Score=74.59 Aligned_cols=92 Identities=25% Similarity=0.282 Sum_probs=67.2
Q ss_pred CeEEEECCChHHHHHHHHHHHHHHHHHHhhhcCCCCccEEEEEeCCCCCCCC----------------------------
Q 018704 231 LHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEILSSF---------------------------- 282 (351)
Q Consensus 231 ~~v~VvGgG~~a~e~a~~l~~~~~~~~~~~~~~~~~~~~v~~~~~~~~l~~~---------------------------- 282 (351)
.+|+|||||..|+.+|..|.+.+ .+|+++++++.+.+.
T Consensus 7 ~dvvIIGaG~aGl~aA~~l~~~g--------------~~V~liE~~~~~GG~~~~~g~~p~k~l~~~~~~~~~~~~~~~~ 72 (470)
T 1dxl_A 7 NDVVIIGGGPGGYVAAIKAAQLG--------------FKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAKHSFAN 72 (470)
T ss_dssp CCEEEECCSHHHHHHHHHHHHHT--------------CCEEEEECSSSSCCSHHHHSHHHHHHHHHHHHHHHHHHHTHHH
T ss_pred CCEEEECCCHHHHHHHHHHHHCC--------------CeEEEEeCCCCccccccCcCccchHHHHHHHHHHHHHHHHHHh
Confidence 48999999999999999999877 899999997422110
Q ss_pred ----------cH-H-----------HHHHHHHHhhhcCcEEEcCeEEEEeCCeEEe--cCC--cEEeccEEEEecCCCCc
Q 018704 283 ----------DD-R-----------LRHYATTQLSKSGVRLVRGIVKDVDSQKLIL--NDG--TEVPYGLLVWSTGVGPS 336 (351)
Q Consensus 283 ----------~~-~-----------~~~~~~~~l~~~gV~~~~~~v~~v~~~~v~~--~~g--~~~~~D~vi~a~G~~p~ 336 (351)
+. . +...+.+.+++.||+++.++...++.+.+.+ .+| .++.+|.||+|||.+|.
T Consensus 73 ~g~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~gv~~~~g~~~~~~~~~~~v~~~~G~~~~i~~d~lIiAtGs~p~ 152 (470)
T 1dxl_A 73 HGVKVSNVEIDLAAMMGQKDKAVSNLTRGIEGLFKKNKVTYVKGYGKFVSPSEISVDTIEGENTVVKGKHIIIATGSDVK 152 (470)
T ss_dssp HTEEESCEEECHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEESCEEEEETTEEEECCSSSCCEEEECSEEEECCCEEEC
T ss_pred cCcccCCCccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeEEEEecCCEEEEEeCCCceEEEEcCEEEECCCCCCC
Confidence 00 0 1111234566779999999754566666555 466 67999999999998877
No 257
>2ivd_A PPO, PPOX, protoporphyrinogen oxidase; porphyrin biosynthesis, chlorophyll biosynthesis, oxidoreductase, HAEM biosynthesis, heme biosynthesis; HET: ACJ FAD TWN; 2.3A {Myxococcus xanthus} SCOP: c.3.1.2 d.16.1.5 PDB: 2ive_A*
Probab=98.05 E-value=2.7e-06 Score=80.79 Aligned_cols=38 Identities=18% Similarity=0.259 Sum_probs=33.7
Q ss_pred CCCcEEEECCchhHHHHHHhhhccCceEEEEcCCCccc
Q 018704 61 EKPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRNHMV 98 (351)
Q Consensus 61 ~~~~VvIIG~G~aGl~aA~~L~~~g~~v~vie~~~~~~ 98 (351)
..+||+|||||++||+||+.|++.|++|+|+|+++...
T Consensus 15 ~~~~v~iiG~G~~Gl~aa~~l~~~g~~v~v~E~~~~~G 52 (478)
T 2ivd_A 15 TGMNVAVVGGGISGLAVAHHLRSRGTDAVLLESSARLG 52 (478)
T ss_dssp --CCEEEECCBHHHHHHHHHHHTTTCCEEEECSSSSSB
T ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCCEEEEEcCCCCC
Confidence 45799999999999999999999999999999987653
No 258
>1v0j_A UDP-galactopyranose mutase; flavoprotein, isomerase; HET: FAD BCN; 2.25A {Mycobacterium tuberculosis}
Probab=98.05 E-value=3e-06 Score=78.74 Aligned_cols=37 Identities=24% Similarity=0.398 Sum_probs=34.2
Q ss_pred CCcEEEECCchhHHHHHHhhhcc-CceEEEEcCCCccc
Q 018704 62 KPRVVVLGSGWAGCRLMKGIDTS-LYDVVCVSPRNHMV 98 (351)
Q Consensus 62 ~~~VvIIG~G~aGl~aA~~L~~~-g~~v~vie~~~~~~ 98 (351)
.+||+|||||++||+||+.|++. |++|+|+|++++..
T Consensus 7 ~~~v~IiGaG~~Gl~aA~~L~~~~g~~v~v~E~~~~~G 44 (399)
T 1v0j_A 7 RFDLFVVGSGFFGLTIAERVATQLDKRVLVLERRPHIG 44 (399)
T ss_dssp SCSEEEECCSHHHHHHHHHHHHHSCCCEEEECSSSSSS
T ss_pred cCCEEEECCCHHHHHHHHHHHHhCCCCEEEEeCCCCCC
Confidence 58999999999999999999998 99999999987653
No 259
>3hdq_A UDP-galactopyranose mutase; substrate and inhibitor, isomerase; HET: GDU FAD; 2.36A {Deinococcus radiodurans} PDB: 3hdy_A* 3he3_A* 3mj4_A*
Probab=98.04 E-value=3.2e-06 Score=78.21 Aligned_cols=38 Identities=26% Similarity=0.405 Sum_probs=34.7
Q ss_pred CCCcEEEECCchhHHHHHHhhhccCceEEEEcCCCccc
Q 018704 61 EKPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRNHMV 98 (351)
Q Consensus 61 ~~~~VvIIG~G~aGl~aA~~L~~~g~~v~vie~~~~~~ 98 (351)
..+||+|||||++||++|+.|++.|.+|+|+|++++..
T Consensus 28 ~~~dv~IIGaG~aGl~aA~~l~~~g~~v~v~E~~~~~G 65 (397)
T 3hdq_A 28 KGFDYLIVGAGFAGSVLAERLASSGQRVLIVDRRPHIG 65 (397)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSS
T ss_pred CCCCEEEECccHHHHHHHHHHHHCCCceEEEeccCCCC
Confidence 45899999999999999999999999999999987653
No 260
>2yg5_A Putrescine oxidase; oxidoreductase, flavin; HET: FAD; 1.90A {Rhodococcus erythropolis} PDB: 2yg6_A* 2yg3_A* 2yg4_A* 2yg7_A* 3rha_A*
Probab=98.04 E-value=1.7e-06 Score=81.56 Aligned_cols=36 Identities=17% Similarity=0.356 Sum_probs=33.6
Q ss_pred CCcEEEECCchhHHHHHHhhhccCceEEEEcCCCcc
Q 018704 62 KPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRNHM 97 (351)
Q Consensus 62 ~~~VvIIG~G~aGl~aA~~L~~~g~~v~vie~~~~~ 97 (351)
.+||+|||||++||+||..|++.|++|+|+|+++..
T Consensus 5 ~~~v~iiG~G~~Gl~aA~~l~~~g~~v~v~E~~~~~ 40 (453)
T 2yg5_A 5 QRDVAIVGAGPSGLAAATALRKAGLSVAVIEARDRV 40 (453)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSS
T ss_pred cCCEEEECCCHHHHHHHHHHHHCCCcEEEEECCCCC
Confidence 479999999999999999999999999999998765
No 261
>3nix_A Flavoprotein/dehydrogenase; structural genomics, PSI-2, NES protein structure initiative, northeast structural genomics consortium; HET: FAD; 2.60A {Cytophaga hutchinsonii}
Probab=98.03 E-value=1.9e-05 Score=73.54 Aligned_cols=91 Identities=16% Similarity=0.292 Sum_probs=67.6
Q ss_pred eEEEECCChHHHHHHHHHHHHHHHHHHhhhcCCCCccEEEEEeCCCCCC---------C---------------------
Q 018704 232 HCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEILS---------S--------------------- 281 (351)
Q Consensus 232 ~v~VvGgG~~a~e~a~~l~~~~~~~~~~~~~~~~~~~~v~~~~~~~~l~---------~--------------------- 281 (351)
+|+|||||.+|+-+|..|++.| .+|+++++..... .
T Consensus 7 dVvIIGgG~aGl~~A~~La~~G--------------~~V~v~E~~~~~~~~~g~~~~~~~~~~l~~~g~~~~~~~~~~~~ 72 (421)
T 3nix_A 7 DVLVIGAGPAGTVAASLVNKSG--------------FKVKIVEKQKFPRFVIGESLLPRCMEHLDEAGFLDAVKAQGFQQ 72 (421)
T ss_dssp EEEEECCSHHHHHHHHHHHTTT--------------CCEEEECSSCSSCCCSCCBCCGGGHHHHHHTTCHHHHHHTTCEE
T ss_pred cEEEECCCHHHHHHHHHHHhCC--------------CCEEEEeCCCCCCCcccCcccHhHHHHHHHcCChHHHHHcCCcc
Confidence 8999999999999999998866 7888888753100 0
Q ss_pred ------------------------------C-cHHHHHHHHHHhhhcCcEEEcC-eEEEEeC--C----eEEecCCc--E
Q 018704 282 ------------------------------F-DDRLRHYATTQLSKSGVRLVRG-IVKDVDS--Q----KLILNDGT--E 321 (351)
Q Consensus 282 ------------------------------~-~~~~~~~~~~~l~~~gV~~~~~-~v~~v~~--~----~v~~~~g~--~ 321 (351)
+ ...+.+.+.+.+++.|++++.+ +|+++.. + .+.+.+|+ +
T Consensus 73 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~L~~~a~~~gv~i~~~~~v~~i~~~~~~~~v~v~~~~g~~~~ 152 (421)
T 3nix_A 73 KFGAKFVRGKEIADFNFSDQFSNGWNWTWQVPRGNFDKTLADEAARQGVDVEYEVGVTDIKFFGTDSVTTIEDINGNKRE 152 (421)
T ss_dssp ECEEEEEETTEEEEEETTSCSSCSCCCEEECCHHHHHHHHHHHHHHHTCEEECSEEEEEEEEETTEEEEEEEETTSCEEE
T ss_pred cCCcEEEeCCeeEEEeehhhcCCCCCceeEECHHHHHHHHHHHHHhCCCEEEcCCEEEEEEEeCCEEEEEEEcCCCCEEE
Confidence 0 0134455666777789999999 4888763 3 24446787 6
Q ss_pred EeccEEEEecCCCCc
Q 018704 322 VPYGLLVWSTGVGPS 336 (351)
Q Consensus 322 ~~~D~vi~a~G~~p~ 336 (351)
+.+|.||.|+|..+.
T Consensus 153 ~~a~~vV~A~G~~s~ 167 (421)
T 3nix_A 153 IEARFIIDASGYGRV 167 (421)
T ss_dssp EEEEEEEECCGGGCH
T ss_pred EEcCEEEECCCCchh
Confidence 999999999998763
No 262
>2vvm_A Monoamine oxidase N; FAD, peroxisome, flavoprotein, oxidoreductase, enantioselectivity, directed evolution variant; HET: FAD; 1.85A {Aspergillus niger} PDB: 2vvl_A* 2vvl_G*
Probab=98.02 E-value=3.6e-06 Score=80.39 Aligned_cols=51 Identities=18% Similarity=0.227 Sum_probs=40.8
Q ss_pred HHHHHHHHHHhhhcC-cEEEcCe-EEEEeC--C--eEEecCCcEEeccEEEEecCCC
Q 018704 284 DRLRHYATTQLSKSG-VRLVRGI-VKDVDS--Q--KLILNDGTEVPYGLLVWSTGVG 334 (351)
Q Consensus 284 ~~~~~~~~~~l~~~g-V~~~~~~-v~~v~~--~--~v~~~~g~~~~~D~vi~a~G~~ 334 (351)
..+.+.+.+.+.+.| ++++.++ |++++. + .|.+.+|+++.+|.||+|+|..
T Consensus 255 ~~l~~~l~~~l~~~g~~~i~~~~~V~~i~~~~~~v~v~~~~g~~~~ad~vI~a~~~~ 311 (495)
T 2vvm_A 255 SAFARRFWEEAAGTGRLGYVFGCPVRSVVNERDAARVTARDGREFVAKRVVCTIPLN 311 (495)
T ss_dssp HHHHHHHHHHHHTTTCEEEESSCCEEEEEECSSSEEEEETTCCEEEEEEEEECCCGG
T ss_pred HHHHHHHHHHhhhcCceEEEeCCEEEEEEEcCCEEEEEECCCCEEEcCEEEECCCHH
Confidence 367777888888888 9999995 998863 3 4556788889999999999954
No 263
>3c4a_A Probable tryptophan hydroxylase VIOD; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.30A {Chromobacterium violaceum atcc 12472}
Probab=98.02 E-value=3e-06 Score=78.18 Aligned_cols=35 Identities=20% Similarity=0.409 Sum_probs=32.2
Q ss_pred CcEEEECCchhHHHHHHhhhcc--CceEEEEcCCCcc
Q 018704 63 PRVVVLGSGWAGCRLMKGIDTS--LYDVVCVSPRNHM 97 (351)
Q Consensus 63 ~~VvIIG~G~aGl~aA~~L~~~--g~~v~vie~~~~~ 97 (351)
+||+|||||++||++|..|++. |++|+|+|+.+..
T Consensus 1 ~dV~IVGaG~aGl~~A~~L~~~~~G~~V~v~E~~~~~ 37 (381)
T 3c4a_A 1 MKILVIGAGPAGLVFASQLKQARPLWAIDIVEKNDEQ 37 (381)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSSCTT
T ss_pred CeEEEECCCHHHHHHHHHHHhcCCCCCEEEEECCCCC
Confidence 4899999999999999999998 9999999987654
No 264
>3ces_A MNMG, tRNA uridine 5-carboxymethylaminomethyl modificat GIDA, GIDA; tRNA modification, FAD binding domain, structural genomics; 2.41A {Escherichia coli} PDB: 3cp2_A 3g05_A
Probab=98.02 E-value=3e-05 Score=75.70 Aligned_cols=91 Identities=19% Similarity=0.241 Sum_probs=69.2
Q ss_pred eEEEECCChHHHHHHHHHHHHHHHHHHhhhcCCCCccEEEEEeCCC-CCC------------------------C-----
Q 018704 232 HCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANE-ILS------------------------S----- 281 (351)
Q Consensus 232 ~v~VvGgG~~a~e~a~~l~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~l~------------------------~----- 281 (351)
.|+|||||..|+.+|..+++.| .+|.++++.. .+. .
T Consensus 30 DVIVIGgG~AGl~AAlaLAr~G--------------~kVlLIEk~~~~iG~~~Cnps~ggia~~~lv~ei~algg~~~~~ 95 (651)
T 3ces_A 30 DVIIIGGGHAGTEAAMAAARMG--------------QQTLLLTHNIDTLGQMSCNPAIGGIGKGHLVKEVDALGGLMAKA 95 (651)
T ss_dssp EEEEECCSHHHHHHHHHHHHTT--------------CCEEEEESCGGGTTCCSSSSEEESTTHHHHHHHHHHTTCSHHHH
T ss_pred CEEEECChHHHHHHHHHHHhCC--------------CCEEEEeecccccccccccccccchhhHHHHHHHHHhccHHHHH
Confidence 8999999999999999999877 8899998752 100 0
Q ss_pred -------------------------Cc-HHHHHHHHHHhhh-cCcEEEcCeEEEEe--CC---eEEecCCcEEeccEEEE
Q 018704 282 -------------------------FD-DRLRHYATTQLSK-SGVRLVRGIVKDVD--SQ---KLILNDGTEVPYGLLVW 329 (351)
Q Consensus 282 -------------------------~~-~~~~~~~~~~l~~-~gV~~~~~~v~~v~--~~---~v~~~~g~~~~~D~vi~ 329 (351)
.+ ..+...+.+.+++ .||+++.++|+++. ++ +|.+.+|.++.||.||+
T Consensus 96 ~d~~gi~f~~l~~~kgpav~~~r~~~Dr~~~~~~L~e~Le~~~GV~I~~~~V~~L~~e~g~V~GV~t~dG~~I~Ad~VVL 175 (651)
T 3ces_A 96 IDQAGIQFRILNASKGPAVRATRAQADRVLYRQAVRTALENQPNLMIFQQAVEDLIVENDRVVGAVTQMGLKFRAKAVVL 175 (651)
T ss_dssp HHHHEEEEEEESTTSCGGGCEEEEEECHHHHHHHHHHHHHTCTTEEEEECCEEEEEESSSBEEEEEETTSEEEEEEEEEE
T ss_pred hhhcccchhhhhcccCcccccchhhCCHHHHHHHHHHHHHhCCCCEEEEEEEEEEEecCCEEEEEEECCCCEEECCEEEE
Confidence 00 1244556666777 69999766788884 33 56778888899999999
Q ss_pred ecCCCCc
Q 018704 330 STGVGPS 336 (351)
Q Consensus 330 a~G~~p~ 336 (351)
|+|..+.
T Consensus 176 ATGt~s~ 182 (651)
T 3ces_A 176 TVGTFLD 182 (651)
T ss_dssp CCSTTTC
T ss_pred cCCCCcc
Confidence 9998876
No 265
>3lov_A Protoporphyrinogen oxidase; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: FAD; 2.06A {Exiguobacterium sibiricum}
Probab=97.98 E-value=4.4e-06 Score=79.31 Aligned_cols=36 Identities=14% Similarity=0.348 Sum_probs=33.4
Q ss_pred CCcEEEECCchhHHHHHHhhhccC--ceEEEEcCCCcc
Q 018704 62 KPRVVVLGSGWAGCRLMKGIDTSL--YDVVCVSPRNHM 97 (351)
Q Consensus 62 ~~~VvIIG~G~aGl~aA~~L~~~g--~~v~vie~~~~~ 97 (351)
++||+|||||++||++|++|++.| .+|+|+|+++..
T Consensus 4 ~~~v~IiGaG~~Gl~~A~~L~~~g~~~~v~v~E~~~~~ 41 (475)
T 3lov_A 4 SKRLVIVGGGITGLAAAYYAERAFPDLNITLLEAGERL 41 (475)
T ss_dssp SCEEEEECCBHHHHHHHHHHHHHCTTSEEEEECSSSSS
T ss_pred cccEEEECCCHHHHHHHHHHHHhCCCCCEEEEECCCCC
Confidence 479999999999999999999999 999999997764
No 266
>1sez_A Protoporphyrinogen oxidase, mitochondrial; FAD-binding, para-hydroxy-benzoate-hydroxylase fold (PHBH- fold), monotopic membrane-binding domain; HET: FAD OMN TON; 2.90A {Nicotiana tabacum} SCOP: c.3.1.2 d.16.1.5
Probab=97.98 E-value=4.6e-06 Score=79.79 Aligned_cols=37 Identities=19% Similarity=0.279 Sum_probs=33.9
Q ss_pred CCCcEEEECCchhHHHHHHhhhccCceEEEEcCCCcc
Q 018704 61 EKPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRNHM 97 (351)
Q Consensus 61 ~~~~VvIIG~G~aGl~aA~~L~~~g~~v~vie~~~~~ 97 (351)
..+||+|||||++||+||+.|++.|++|+|+|+++..
T Consensus 12 ~~~~v~iiG~G~~Gl~aA~~l~~~g~~v~v~E~~~~~ 48 (504)
T 1sez_A 12 SAKRVAVIGAGVSGLAAAYKLKIHGLNVTVFEAEGKA 48 (504)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHTTSCEEEEECSSSSS
T ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCcEEEEEeCCCC
Confidence 3579999999999999999999999999999998775
No 267
>3dgz_A Thioredoxin reductase 2; oxidoreductase, rossmann, flavoprotein, FAD, mitochondrion, redox-active center, selenium, selenocysteine, transit PEPT; HET: FAD NA7; 2.25A {Mus musculus} PDB: 1zkq_A* 1zdl_A*
Probab=97.96 E-value=1.6e-05 Score=75.75 Aligned_cols=102 Identities=11% Similarity=0.112 Sum_probs=65.4
Q ss_pred CCcEEEECCchhHHHHHHhhhccCceEEEEcCCCccccchhhhhhhcccccccccccchhccchhhhcCCCeEEEEE-Ee
Q 018704 62 KPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRNHMVFTPLLASTCVGTLEFRSVAEPIARIQPAISREPGSYFFLS-HC 140 (351)
Q Consensus 62 ~~~VvIIG~G~aGl~aA~~L~~~g~~v~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~v 140 (351)
..+|+|||||+.|+.+|..|++.|.+|+++++...+.. +...+...........++.++.. .+
T Consensus 185 ~~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~l~~----------------~d~~~~~~l~~~l~~~gv~~~~~~~v 248 (488)
T 3dgz_A 185 PGKTLVVGASYVALECAGFLTGIGLDTTVMMRSIPLRG----------------FDQQMSSLVTEHMESHGTQFLKGCVP 248 (488)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEEEESSCSSTT----------------SCHHHHHHHHHHHHHTTCEEEETEEE
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCceEEEEcCccccc----------------CCHHHHHHHHHHHHHCCCEEEeCCEE
Confidence 46899999999999999999999999999998542110 11112222222233457776654 67
Q ss_pred eeEeC-CCCEEEE--EeecCccccCCCceeEeeccEEEEecCCCcCCC
Q 018704 141 AGIDT-DNHVVHC--ETVTDELRTLEPWKFKISYDKLVIALGAEASTF 185 (351)
Q Consensus 141 ~~i~~-~~~~v~~--~~~~~~~~~~~~~~~~~~~d~lviAtG~~p~~p 185 (351)
..+.. +...+.+ ....+++ ..++.+|.||+|+|..|...
T Consensus 249 ~~i~~~~~~~~~v~~~~~~~g~------~~~~~~D~vi~a~G~~p~~~ 290 (488)
T 3dgz_A 249 SHIKKLPTNQLQVTWEDHASGK------EDTGTFDTVLWAIGRVPETR 290 (488)
T ss_dssp EEEEECTTSCEEEEEEETTTTE------EEEEEESEEEECSCEEESCG
T ss_pred EEEEEcCCCcEEEEEEeCCCCe------eEEEECCEEEEcccCCcccC
Confidence 77765 2333333 2211232 22578999999999887764
No 268
>3dgh_A TRXR-1, thioredoxin reductase 1, mitochondrial; oxidoreductase, rossmann, flavoprotein, alternative initiati mitochondrion, NADP; HET: FAD; 1.75A {Drosophila melanogaster} PDB: 2nvk_X* 3dh9_A*
Probab=97.96 E-value=1.6e-05 Score=75.72 Aligned_cols=102 Identities=16% Similarity=0.196 Sum_probs=65.4
Q ss_pred CCcEEEECCchhHHHHHHhhhccCceEEEEcCCCccccchhhhhhhcccccccccccchhccchhhhcCCCeEEEE-EEe
Q 018704 62 KPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRNHMVFTPLLASTCVGTLEFRSVAEPIARIQPAISREPGSYFFL-SHC 140 (351)
Q Consensus 62 ~~~VvIIG~G~aGl~aA~~L~~~g~~v~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~v 140 (351)
..+++|||||+.|+.+|..|++.|.+|+++++...+.. +...+...........++.++. ..|
T Consensus 187 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~l~~----------------~d~~~~~~l~~~l~~~Gv~i~~~~~v 250 (483)
T 3dgh_A 187 PGKTLVVGAGYIGLECAGFLKGLGYEPTVMVRSIVLRG----------------FDQQMAELVAASMEERGIPFLRKTVP 250 (483)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSCSSTT----------------SCHHHHHHHHHHHHHTTCCEEETEEE
T ss_pred CCcEEEECCCHHHHHHHHHHHHcCCEEEEEeCCCCCcc----------------cCHHHHHHHHHHHHhCCCEEEeCCEE
Confidence 46899999999999999999999999999988432110 0111222222223334666655 477
Q ss_pred eeEeCCCC-E--EEEEeecCccccCCCceeEeeccEEEEecCCCcCCC
Q 018704 141 AGIDTDNH-V--VHCETVTDELRTLEPWKFKISYDKLVIALGAEASTF 185 (351)
Q Consensus 141 ~~i~~~~~-~--v~~~~~~~~~~~~~~~~~~~~~d~lviAtG~~p~~p 185 (351)
..+..+.. . +.+.....++ ...+.+|.||+|+|..|...
T Consensus 251 ~~i~~~~~~~~~v~~~~~~~~~------~~~~~~D~vi~a~G~~p~~~ 292 (483)
T 3dgh_A 251 LSVEKQDDGKLLVKYKNVETGE------ESEDVYDTVLWAIGRKGLVD 292 (483)
T ss_dssp EEEEECTTSCEEEEEEETTTCC------EEEEEESEEEECSCEEECCG
T ss_pred EEEEEcCCCcEEEEEecCCCCc------eeEEEcCEEEECcccccCcC
Confidence 88875432 2 3332211122 23789999999999887654
No 269
>1i8t_A UDP-galactopyranose mutase; rossman fold, FAD, contractase, isomerase; HET: FAD; 2.40A {Escherichia coli} SCOP: c.4.1.3 d.16.1.7
Probab=97.96 E-value=5.3e-06 Score=76.19 Aligned_cols=35 Identities=23% Similarity=0.386 Sum_probs=32.9
Q ss_pred CcEEEECCchhHHHHHHhhhccCceEEEEcCCCcc
Q 018704 63 PRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRNHM 97 (351)
Q Consensus 63 ~~VvIIG~G~aGl~aA~~L~~~g~~v~vie~~~~~ 97 (351)
+||+|||||++||++|..|++.|.+|+|+|++++.
T Consensus 2 ~~v~iiG~G~~Gl~~A~~l~~~g~~v~v~E~~~~~ 36 (367)
T 1i8t_A 2 YDYIIVGSGLFGAVCANELKKLNKKVLVIEKRNHI 36 (367)
T ss_dssp EEEEEECCSHHHHHHHHHHGGGTCCEEEECSSSSS
T ss_pred CCEEEECcCHHHHHHHHHHHhCCCcEEEEecCCCC
Confidence 68999999999999999999999999999998764
No 270
>2vou_A 2,6-dihydroxypyridine hydroxylase; oxidoreductase, aromatic hydroxylase, nicotine degradation, mono-oxygenase; HET: FAD; 2.6A {Arthrobacter nicotinovorans} SCOP: c.3.1.2 d.16.1.2
Probab=97.95 E-value=4e-05 Score=70.93 Aligned_cols=92 Identities=21% Similarity=0.241 Sum_probs=65.7
Q ss_pred CeEEEECCChHHHHHHHHHHHHHHHHHHhhhcCCCCccEEEEEeCCCCC-CC------CcHHHHHHH-------------
Q 018704 231 LHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEIL-SS------FDDRLRHYA------------- 290 (351)
Q Consensus 231 ~~v~VvGgG~~a~e~a~~l~~~~~~~~~~~~~~~~~~~~v~~~~~~~~l-~~------~~~~~~~~~------------- 290 (351)
.+|+|||||.+|+-+|..|.+.| .+|+++++.... .. +.+...+.+
T Consensus 6 ~~V~IVGaG~aGl~~A~~L~~~G--------------~~v~v~E~~~~~~~~~~~g~~l~~~~~~~l~~~g~~~~~~~~~ 71 (397)
T 2vou_A 6 DRIAVVGGSISGLTAALMLRDAG--------------VDVDVYERSPQPLSGFGTGIVVQPELVHYLLEQGVELDSISVP 71 (397)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTT--------------CEEEEECSSSSSCCCCSCEEECCHHHHHHHHHTTCCGGGTCBC
T ss_pred CcEEEECCCHHHHHHHHHHHhCC--------------CCEEEEecCCCCCCccccccccChhHHHHHHHcCCcccccccc
Confidence 38999999999999999999877 899999986321 11 122222221
Q ss_pred ------------------------------HHHhhh--cCcEEEcCe-EEEEeC--C--eEEecCCcEEeccEEEEecCC
Q 018704 291 ------------------------------TTQLSK--SGVRLVRGI-VKDVDS--Q--KLILNDGTEVPYGLLVWSTGV 333 (351)
Q Consensus 291 ------------------------------~~~l~~--~gV~~~~~~-v~~v~~--~--~v~~~~g~~~~~D~vi~a~G~ 333 (351)
.+.|.+ .|++++.+. |++++. + .+.+.+|+++.+|.||.|.|.
T Consensus 72 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~i~~~~~v~~i~~~~~~v~v~~~~g~~~~ad~vV~AdG~ 151 (397)
T 2vou_A 72 SSSMEYVDALTGERVGSVPADWRFTSYDSIYGGLYELFGPERYHTSKCLVGLSQDSETVQMRFSDGTKAEANWVIGADGG 151 (397)
T ss_dssp CCEEEEEETTTCCEEEEEECCCCEEEHHHHHHHHHHHHCSTTEETTCCEEEEEECSSCEEEEETTSCEEEESEEEECCCT
T ss_pred ccceEEEecCCCCccccccCcccccCHHHHHHHHHHhCCCcEEEcCCEEEEEEecCCEEEEEECCCCEEECCEEEECCCc
Confidence 111211 378899884 888854 2 466788989999999999998
Q ss_pred CCc
Q 018704 334 GPS 336 (351)
Q Consensus 334 ~p~ 336 (351)
...
T Consensus 152 ~S~ 154 (397)
T 2vou_A 152 ASV 154 (397)
T ss_dssp TCH
T ss_pred chh
Confidence 765
No 271
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=97.95 E-value=3.6e-06 Score=87.38 Aligned_cols=92 Identities=17% Similarity=0.321 Sum_probs=69.9
Q ss_pred ccCeEEEECCChHHHHHHHHHHHHHHHHHHhhhcCCCCcc-EEEEEeCCCCC--------CC--CcHHHHHHHHHHhhhc
Q 018704 229 RLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYI-HVTLIEANEIL--------SS--FDDRLRHYATTQLSKS 297 (351)
Q Consensus 229 ~~~~v~VvGgG~~a~e~a~~l~~~~~~~~~~~~~~~~~~~-~v~~~~~~~~l--------~~--~~~~~~~~~~~~l~~~ 297 (351)
..++|+|||||+.|+.+|..|.+.| . +|+++++.+.+ +. ++.+......+.+++.
T Consensus 186 ~~~~VvVIGgGpAGl~aA~~L~~~G--------------~~~Vtv~E~~~~~GG~~~~~ip~~~~~~~~~~~~~~~~~~~ 251 (1025)
T 1gte_A 186 YSAKIALLGAGPASISCASFLARLG--------------YSDITIFEKQEYVGGLSTSEIPQFRLPYDVVNFEIELMKDL 251 (1025)
T ss_dssp GGCCEEEECCSHHHHHHHHHHHHTT--------------CCCEEEEESSSSCSTHHHHTSCTTTSCHHHHHHHHHHHHTT
T ss_pred CCCEEEEECccHHHHHHHHHHHhcC--------------CCcEEEEeCCCCCCccccccCCcccCCHHHHHHHHHHHHHC
Confidence 4679999999999999999999877 6 69999997432 11 2345566666778889
Q ss_pred CcEEEcCeEEEEeCCeEEecCCcEEeccEEEEecCC-CCc
Q 018704 298 GVRLVRGIVKDVDSQKLILNDGTEVPYGLLVWSTGV-GPS 336 (351)
Q Consensus 298 gV~~~~~~v~~v~~~~v~~~~g~~~~~D~vi~a~G~-~p~ 336 (351)
||+++.++... ...+.+.++.++.+|.||+|||. +|.
T Consensus 252 gv~~~~~~~v~--~~~v~~~~~~~~~~d~vvlAtGa~~p~ 289 (1025)
T 1gte_A 252 GVKIICGKSLS--ENEITLNTLKEEGYKAAFIGIGLPEPK 289 (1025)
T ss_dssp TCEEEESCCBS--TTSBCHHHHHHTTCCEEEECCCCCEEC
T ss_pred CcEEEcccEec--cceEEhhhcCccCCCEEEEecCCCCCC
Confidence 99999996321 13455666666889999999998 466
No 272
>2iid_A L-amino-acid oxidase; flavoenzyme, FAD binding domain, reaction mechanism, sustrat binding, oxidoreductase; HET: NAG FUC PHE FAD; 1.80A {Calloselasma rhodostoma} SCOP: c.3.1.2 d.16.1.5 PDB: 1f8s_A* 1f8r_A* 1reo_A* 1tdk_A* 1tdn_A* 1tdo_A* 3kve_A* 4e0v_A*
Probab=97.95 E-value=6.2e-06 Score=78.81 Aligned_cols=38 Identities=18% Similarity=0.207 Sum_probs=34.6
Q ss_pred CCCcEEEECCchhHHHHHHhhhccCceEEEEcCCCccc
Q 018704 61 EKPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRNHMV 98 (351)
Q Consensus 61 ~~~~VvIIG~G~aGl~aA~~L~~~g~~v~vie~~~~~~ 98 (351)
..+||+|||||++||++|..|++.|.+|+|+|+++...
T Consensus 32 ~~~~v~IiGaG~~Gl~aA~~l~~~g~~v~vlE~~~~~g 69 (498)
T 2iid_A 32 NPKHVVIVGAGMAGLSAAYVLAGAGHQVTVLEASERPG 69 (498)
T ss_dssp SCCEEEEECCBHHHHHHHHHHHHHTCEEEEECSSSSSB
T ss_pred CCCCEEEECCCHHHHHHHHHHHhCCCeEEEEECCCCCC
Confidence 35799999999999999999999999999999987653
No 273
>3g3e_A D-amino-acid oxidase; FAD, flavoprotein, oxidoreductase, PER; HET: FAD G3E; 2.20A {Homo sapiens} PDB: 3cuk_A* 2e48_A* 2e49_A* 2e4a_A* 2e82_A* 2du8_A* 1ve9_A* 1dao_A* 1ddo_A* 1kif_A* 1an9_A* 1evi_A*
Probab=97.94 E-value=3.7e-06 Score=76.55 Aligned_cols=33 Identities=30% Similarity=0.366 Sum_probs=30.9
Q ss_pred CcEEEECCchhHHHHHHhhhccC------ceEEEEcCCC
Q 018704 63 PRVVVLGSGWAGCRLMKGIDTSL------YDVVCVSPRN 95 (351)
Q Consensus 63 ~~VvIIG~G~aGl~aA~~L~~~g------~~v~vie~~~ 95 (351)
+||+|||||++|+++|+.|++.| .+|+|+|++.
T Consensus 1 mdVvIIGgGi~Gls~A~~La~~G~~~~p~~~V~vlE~~~ 39 (351)
T 3g3e_A 1 MRVVVIGAGVIGLSTALCIHERYHSVLQPLDIKVYADRF 39 (351)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHHTTTSSSCEEEEEESSC
T ss_pred CcEEEECCCHHHHHHHHHHHHhccccCCCceEEEEECCC
Confidence 48999999999999999999998 8999999875
No 274
>3qfa_A Thioredoxin reductase 1, cytoplasmic; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_A* 2j3n_A* 2zzc_A* 2zzb_A* 2zz0_A* 2cfy_A* 1h6v_A* 3ean_A* 3eao_A*
Probab=97.94 E-value=2.4e-05 Score=75.21 Aligned_cols=104 Identities=13% Similarity=0.123 Sum_probs=62.9
Q ss_pred CCcEEEECCchhHHHHHHhhhccCceEEEEcCCCccccchhhhhhhcccccccccccchhccchhhhcCCCeEEEEE-Ee
Q 018704 62 KPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRNHMVFTPLLASTCVGTLEFRSVAEPIARIQPAISREPGSYFFLS-HC 140 (351)
Q Consensus 62 ~~~VvIIG~G~aGl~aA~~L~~~g~~v~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~v 140 (351)
..+|+|||||+.|+.+|..|++.|.+|+++++...+. . +...+.+.........++.++.. .+
T Consensus 210 ~~~vvVIGgG~ig~E~A~~l~~~G~~Vtlv~~~~~l~------~----------~d~~~~~~~~~~l~~~GV~v~~~~~v 273 (519)
T 3qfa_A 210 PGKTLVVGASYVALECAGFLAGIGLDVTVMVRSILLR------G----------FDQDMANKIGEHMEEHGIKFIRQFVP 273 (519)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEEEESSCSST------T----------SCHHHHHHHHHHHHHTTCEEEESEEE
T ss_pred CCeEEEECCcHHHHHHHHHHHHcCCeEEEEecccccc------c----------CCHHHHHHHHHHHHHCCCEEEeCCeE
Confidence 3579999999999999999999999999999842211 0 01112222222233456776653 33
Q ss_pred eeEeC---C-CCEEEEEe-ecCccccCCCceeEeeccEEEEecCCCcCCCC
Q 018704 141 AGIDT---D-NHVVHCET-VTDELRTLEPWKFKISYDKLVIALGAEASTFG 186 (351)
Q Consensus 141 ~~i~~---~-~~~v~~~~-~~~~~~~~~~~~~~~~~d~lviAtG~~p~~p~ 186 (351)
..+.. . ...+.+.. ..++. ....+.+|.||+|+|..|+...
T Consensus 274 ~~v~~~~~~~~~~~~v~~~~~~g~-----~~~~~~~D~vi~a~G~~p~~~~ 319 (519)
T 3qfa_A 274 IKVEQIEAGTPGRLRVVAQSTNSE-----EIIEGEYNTVMLAIGRDACTRK 319 (519)
T ss_dssp EEEEEEECCTTCEEEEEEEESSSS-----CEEEEEESEEEECSCEEESCSS
T ss_pred EEEEEccCCCCceEEEEEEECCCc-----EEEEEECCEEEEecCCcccCCC
Confidence 44432 1 13333321 12231 0136789999999999887653
No 275
>2weu_A Tryptophan 5-halogenase; regioselectivity, antifungal protei; HET: TRP; 1.70A {Streptomyces rugosporus} PDB: 2wet_A* 2wes_A*
Probab=97.94 E-value=4.2e-06 Score=80.35 Aligned_cols=34 Identities=29% Similarity=0.334 Sum_probs=30.7
Q ss_pred CCcEEEECCchhHHHHHHhhhc---cCceEEEEcCCC
Q 018704 62 KPRVVVLGSGWAGCRLMKGIDT---SLYDVVCVSPRN 95 (351)
Q Consensus 62 ~~~VvIIG~G~aGl~aA~~L~~---~g~~v~vie~~~ 95 (351)
.+||||||||++|+++|..|++ .|++|+|||+..
T Consensus 2 ~~dVvIVGgG~aGl~~A~~La~~~~~G~~V~lvE~~~ 38 (511)
T 2weu_A 2 IRSVVIVGGGTAGWMTASYLKAAFDDRIDVTLVESGN 38 (511)
T ss_dssp CCEEEEECCHHHHHHHHHHHHHHHGGGSEEEEEEC--
T ss_pred cceEEEECCCHHHHHHHHHHHhhcCCCCEEEEEecCC
Confidence 4799999999999999999999 999999999865
No 276
>2bi7_A UDP-galactopyranose mutase; FAD, flavoprotein, isomerase, lipopolysaccharide biosynthesi; HET: FAD; 2.0A {Klebsiella pneumoniae} SCOP: c.4.1.3 d.16.1.7 PDB: 2bi8_A* 1wam_A* 3inr_A* 3gf4_A* 3int_A* 3kyb_A*
Probab=97.93 E-value=7.3e-06 Score=75.72 Aligned_cols=37 Identities=16% Similarity=0.449 Sum_probs=34.0
Q ss_pred CCcEEEECCchhHHHHHHhhhccCceEEEEcCCCccc
Q 018704 62 KPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRNHMV 98 (351)
Q Consensus 62 ~~~VvIIG~G~aGl~aA~~L~~~g~~v~vie~~~~~~ 98 (351)
.+||+|||||++||++|..|++.|++|+|+|++++..
T Consensus 3 ~~~v~iiG~G~~Gl~~A~~l~~~g~~v~v~E~~~~~G 39 (384)
T 2bi7_A 3 SKKILIVGAGFSGAVIGRQLAEKGHQVHIIDQRDHIG 39 (384)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTTTCEEEEEESSSSSS
T ss_pred cCCEEEECcCHHHHHHHHHHHHCCCcEEEEEecCCcC
Confidence 3799999999999999999999999999999987653
No 277
>2qcu_A Aerobic glycerol-3-phosphate dehydrogenase; glycerol-3-phoshate dehydrogenase, oxidoreductase; HET: BOG FAD TAM; 1.75A {Escherichia coli} PDB: 2r45_A* 2r46_A* 2r4e_A* 2r4j_A*
Probab=97.92 E-value=5.6e-06 Score=79.31 Aligned_cols=34 Identities=15% Similarity=0.332 Sum_probs=32.1
Q ss_pred CCcEEEECCchhHHHHHHhhhccCceEEEEcCCC
Q 018704 62 KPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRN 95 (351)
Q Consensus 62 ~~~VvIIG~G~aGl~aA~~L~~~g~~v~vie~~~ 95 (351)
.+||+|||||++|+++|+.|+++|++|+|+|+++
T Consensus 3 ~~DVvIIGgGi~G~~~A~~La~~G~~V~llE~~~ 36 (501)
T 2qcu_A 3 TKDLIVIGGGINGAGIAADAAGRGLSVLMLEAQD 36 (501)
T ss_dssp CBSEEEECCSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred cCCEEEECcCHHHHHHHHHHHhCCCCEEEEECCC
Confidence 4799999999999999999999999999999864
No 278
>2zxi_A TRNA uridine 5-carboxymethylaminomethyl modificat MNMG; modification, 5-carboxymethylaminomethyl uridine, WOBB uridine, FAD; HET: FAD; 2.30A {Aquifex aeolicus} PDB: 2zxh_A* 2e57_A*
Probab=97.92 E-value=6.7e-05 Score=72.97 Aligned_cols=91 Identities=22% Similarity=0.275 Sum_probs=68.5
Q ss_pred eEEEECCChHHHHHHHHHHHHHHHHHHhhhcCCCCccEEEEEeCCC-CCC------------------------C-----
Q 018704 232 HCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANE-ILS------------------------S----- 281 (351)
Q Consensus 232 ~v~VvGgG~~a~e~a~~l~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~l~------------------------~----- 281 (351)
.|+|||||..|+++|..+++.| .+|.++++.. .+. .
T Consensus 29 DVIVIGgG~AGl~AAlalAr~G--------------~kVlLIEk~~~~iG~~~Cnps~GGia~g~lv~eldalgg~~~~~ 94 (637)
T 2zxi_A 29 DVVVIGGGHAGIEAALAAARMG--------------AKTAMFVLNADTIGQMSCNPAIGGIAKGIVVREIDALGGEMGKA 94 (637)
T ss_dssp SEEEECCSHHHHHHHHHHHHTT--------------CCEEEEESCGGGTTCCCSCSEEECTTHHHHHHHHHHHTCSHHHH
T ss_pred CEEEECCCHHHHHHHHHHHHCC--------------CCEEEEEecccccCCcCccccccccchHHHHHHHHHhhhHHHHH
Confidence 7999999999999999999877 8888888752 100 0
Q ss_pred -------------------------Cc-HHHHHHHHHHhhh-cCcEEEcCeEEEEe--CC---eEEecCCcEEeccEEEE
Q 018704 282 -------------------------FD-DRLRHYATTQLSK-SGVRLVRGIVKDVD--SQ---KLILNDGTEVPYGLLVW 329 (351)
Q Consensus 282 -------------------------~~-~~~~~~~~~~l~~-~gV~~~~~~v~~v~--~~---~v~~~~g~~~~~D~vi~ 329 (351)
.+ ..+...+.+.+++ .||+++.++|+++. ++ +|.+.+|.++.||.||+
T Consensus 95 ~d~~gi~f~~l~~~kGpav~~~r~~~Dr~~~~~~L~~~Le~~~GVeI~~~~Vt~L~~e~g~V~GV~t~dG~~i~AdaVVL 174 (637)
T 2zxi_A 95 IDQTGIQFKMLNTRKGKAVQSPRAQADKKRYREYMKKVCENQENLYIKQEEVVDIIVKNNQVVGVRTNLGVEYKTKAVVV 174 (637)
T ss_dssp HHHHEEEEEEESTTSCGGGCEEEEEECHHHHHHHHHHHHHTCTTEEEEESCEEEEEESSSBEEEEEETTSCEEECSEEEE
T ss_pred hhhcccceeecccccCccccchhhhCCHHHHHHHHHHHHHhCCCCEEEEeEEEEEEecCCEEEEEEECCCcEEEeCEEEE
Confidence 00 1234455666776 59999766788874 33 47788898999999999
Q ss_pred ecCCCCc
Q 018704 330 STGVGPS 336 (351)
Q Consensus 330 a~G~~p~ 336 (351)
|+|..++
T Consensus 175 ATG~~s~ 181 (637)
T 2zxi_A 175 TTGTFLN 181 (637)
T ss_dssp CCTTCBT
T ss_pred ccCCCcc
Confidence 9998766
No 279
>3cp8_A TRNA uridine 5-carboxymethylaminomethyl modification enzyme GIDA; rossmann fold, FAD-binding domain, dinucleotide-binding motif; HET: FAD; 3.20A {Chlorobium tepidum}
Probab=97.91 E-value=5.1e-05 Score=74.01 Aligned_cols=91 Identities=19% Similarity=0.280 Sum_probs=68.6
Q ss_pred eEEEECCChHHHHHHHHHHHHHHHHHHhhhcCCCCccEEEEEeCCC-CC------CC-----------------------
Q 018704 232 HCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANE-IL------SS----------------------- 281 (351)
Q Consensus 232 ~v~VvGgG~~a~e~a~~l~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~l------~~----------------------- 281 (351)
.|+|||||..|+++|..+++.| .+|.++++.. .+ +.
T Consensus 23 DVIVIGgG~AGl~AAlaLAr~G--------------~kVlLIEk~~~~iG~~~c~ps~gGia~~~lv~el~al~g~~~~~ 88 (641)
T 3cp8_A 23 DVIVVGAGHAGCEAALAVARGG--------------LHCLLITSDLSAVARMSCNPAIGGVAKGQITREIDALGGEMGKA 88 (641)
T ss_dssp EEEEECCSHHHHHHHHHHHHTT--------------CCEEEEESCGGGTTCCSSCSEEECHHHHHHHHHHHHHTCSHHHH
T ss_pred CEEEECccHHHHHHHHHHHHCC--------------CcEEEEEecccccCCCccccchhhhhHHHHHHHHHhcccHHHHH
Confidence 8999999999999999999877 8888888752 11 00
Q ss_pred -------------------------Cc-HHHHHHHHHHhhh-cCcEEEcCeEEEEe--CC---eEEecCCcEEeccEEEE
Q 018704 282 -------------------------FD-DRLRHYATTQLSK-SGVRLVRGIVKDVD--SQ---KLILNDGTEVPYGLLVW 329 (351)
Q Consensus 282 -------------------------~~-~~~~~~~~~~l~~-~gV~~~~~~v~~v~--~~---~v~~~~g~~~~~D~vi~ 329 (351)
.+ ..+...+.+.+++ .||+++.++|+++. ++ +|.+.+|.++.||.||+
T Consensus 89 ~d~~gi~f~~l~~~kgpav~~~r~~~Dr~~l~~~L~~~l~~~~GV~I~~~~V~~L~~d~g~V~GV~t~~G~~i~Ad~VVL 168 (641)
T 3cp8_A 89 IDATGIQFRMLNRSKGPAMHSPRAQADKTQYSLYMRRIVEHEPNIDLLQDTVIGVSANSGKFSSVTVRSGRAIQAKAAIL 168 (641)
T ss_dssp HHHHEEEEEEECSSSCTTTCEEEEEECHHHHHHHHHHHHHTCTTEEEEECCEEEEEEETTEEEEEEETTSCEEEEEEEEE
T ss_pred HHhcCCchhhcccccCccccchhhhcCHHHHHHHHHHHHHhCCCCEEEeeEEEEEEecCCEEEEEEECCCcEEEeCEEEE
Confidence 01 1334455666766 49999877788764 34 36778898999999999
Q ss_pred ecCCCCc
Q 018704 330 STGVGPS 336 (351)
Q Consensus 330 a~G~~p~ 336 (351)
|+|..++
T Consensus 169 ATG~~s~ 175 (641)
T 3cp8_A 169 ACGTFLN 175 (641)
T ss_dssp CCTTCBT
T ss_pred CcCCCCC
Confidence 9998876
No 280
>1k0i_A P-hydroxybenzoate hydroxylase; PHBH, FAD, P-OHB, hydrolase; HET: FAD PHB; 1.80A {Pseudomonas aeruginosa} SCOP: c.3.1.2 d.16.1.2 PDB: 1k0j_A* 1k0l_A* 1doc_A* 1d7l_A* 1dod_A* 1doe_A* 1ius_A* 1iut_A* 1iuu_A* 1iuv_A* 1iuw_A* 1iux_A* 1pxb_A* 1pxc_A* 1dob_A* 1ykj_A* 1pxa_A* 1pbe_A* 1pdh_A* 1phh_A* ...
Probab=97.91 E-value=6.5e-05 Score=69.34 Aligned_cols=91 Identities=13% Similarity=0.226 Sum_probs=68.5
Q ss_pred eEEEECCChHHHHHHHHHHHHHHHHHHhhhcCCCCccEEEEEeCCCC------CC-------------------------
Q 018704 232 HCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEI------LS------------------------- 280 (351)
Q Consensus 232 ~v~VvGgG~~a~e~a~~l~~~~~~~~~~~~~~~~~~~~v~~~~~~~~------l~------------------------- 280 (351)
+|+|||||.+|+-+|..|++.| .+|+++++... ..
T Consensus 4 dV~IvGaG~aGl~~A~~L~~~G--------------~~v~v~E~~~~~~~~~~~~~g~l~~~~~~~l~~lg~~~~~~~~~ 69 (394)
T 1k0i_A 4 QVAIIGAGPSGLLLGQLLHKAG--------------IDNVILERQTPDYVLGRIRAGVLEQGMVDLLREAGVDRRMARDG 69 (394)
T ss_dssp SEEEECCSHHHHHHHHHHHHHT--------------CCEEEECSSCHHHHHTCCCCCEECHHHHHHHHHTTCCHHHHHHC
T ss_pred cEEEECCCHHHHHHHHHHHHCC--------------CCEEEEeCCCCCcccCCCceEeECHHHHHHHHHcCCcHHHHhcC
Confidence 7999999999999999999877 77888877531 00
Q ss_pred ------------------------C-----Cc-HHHHHHHHHHhhhcCcEEEcCe-EEEEeCC-----eEEe-cCCc--E
Q 018704 281 ------------------------S-----FD-DRLRHYATTQLSKSGVRLVRGI-VKDVDSQ-----KLIL-NDGT--E 321 (351)
Q Consensus 281 ------------------------~-----~~-~~~~~~~~~~l~~~gV~~~~~~-v~~v~~~-----~v~~-~~g~--~ 321 (351)
. ++ ..+.+.+.+.+.+.|++++.+. |++++.+ .|.+ .+|+ +
T Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~g~~i~~~~~v~~i~~~~~~~~~v~~~~~g~~~~ 149 (394)
T 1k0i_A 70 LVHEGVEIAFAGQRRRIDLKRLSGGKTVTVYGQTEVTRDLMEAREACGATTVYQAAEVRLHDLQGERPYVTFERDGERLR 149 (394)
T ss_dssp EEESCEEEEETTEEEEECHHHHHTSCCEEECCHHHHHHHHHHHHHHTTCEEESSCEEEEEECTTSSSCEEEEEETTEEEE
T ss_pred CccceEEEEECCceEEeccccccCCCceEEechHHHHHHHHHHHHhcCCeEEeceeEEEEEEecCCceEEEEecCCcEEE
Confidence 0 01 2344556666777799999994 8888642 4666 6887 6
Q ss_pred EeccEEEEecCCCCc
Q 018704 322 VPYGLLVWSTGVGPS 336 (351)
Q Consensus 322 ~~~D~vi~a~G~~p~ 336 (351)
+.+|.||.|.|....
T Consensus 150 ~~a~~vV~AdG~~S~ 164 (394)
T 1k0i_A 150 LDCDYIAGCDGFHGI 164 (394)
T ss_dssp EECSEEEECCCTTCS
T ss_pred EEeCEEEECCCCCcH
Confidence 999999999998766
No 281
>2e4g_A Tryptophan halogenase; flavin-binding, rebeccamycin biosynthesis, biosynthetic protein, flavoprotein; HET: TRP; 2.08A {Lechevalieria aerocolonigenes} PDB: 2o9z_A 2oa1_A* 2oal_A* 2oam_A
Probab=97.91 E-value=8e-06 Score=79.15 Aligned_cols=53 Identities=19% Similarity=0.215 Sum_probs=40.2
Q ss_pred HHHHHHHHHHhhhc-CcEEEcCeEEEEeC--C----eEEecCCcEEeccEEEEecCCCCc
Q 018704 284 DRLRHYATTQLSKS-GVRLVRGIVKDVDS--Q----KLILNDGTEVPYGLLVWSTGVGPS 336 (351)
Q Consensus 284 ~~~~~~~~~~l~~~-gV~~~~~~v~~v~~--~----~v~~~~g~~~~~D~vi~a~G~~p~ 336 (351)
..+.+.+.+.+++. ||+++.++|+++.. + +|.+.+|+++.+|.||.|+|....
T Consensus 194 ~~l~~~L~~~~~~~~Gv~i~~~~V~~i~~~~~g~~~~v~~~~G~~i~ad~vI~A~G~~S~ 253 (550)
T 2e4g_A 194 HLVADFLRRFATEKLGVRHVEDRVEHVQRDANGNIESVRTATGRVFDADLFVDCSGFRGL 253 (550)
T ss_dssp HHHHHHHHHHHHHHSCCEEEECCEEEEEECTTSCEEEEEETTSCEEECSEEEECCGGGCC
T ss_pred HHHHHHHHHHHHhcCCcEEEECeEeEEEEcCCCCEEEEEECCCCEEECCEEEECCCCchh
Confidence 35677777778777 89998888777752 2 466677878899999999997665
No 282
>2dkh_A 3-hydroxybenzoate hydroxylase; flavoprotein, monooxygenase, complex, oxidoreductase; HET: FAD 3HB; 1.80A {Comamonas testosteroni} PDB: 2dki_A*
Probab=97.90 E-value=1.2e-05 Score=79.45 Aligned_cols=35 Identities=20% Similarity=0.287 Sum_probs=32.6
Q ss_pred CCcEEEECCchhHHHHHHhhhc-cCceEEEEcCCCc
Q 018704 62 KPRVVVLGSGWAGCRLMKGIDT-SLYDVVCVSPRNH 96 (351)
Q Consensus 62 ~~~VvIIG~G~aGl~aA~~L~~-~g~~v~vie~~~~ 96 (351)
.+||+||||||+||++|..|++ .|++|+|||+.+.
T Consensus 32 ~~dVlIVGaGpaGL~~A~~La~~~G~~V~viEr~~~ 67 (639)
T 2dkh_A 32 QVDVLIVGCGPAGLTLAAQLAAFPDIRTCIVEQKEG 67 (639)
T ss_dssp EEEEEEECCSHHHHHHHHHHTTCTTSCEEEECSSSS
T ss_pred CCcEEEECcCHHHHHHHHHHHHhCCCCEEEEeCCCC
Confidence 4799999999999999999999 9999999998754
No 283
>3g5s_A Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase TRMFO; tRNA methyltransferase FAD folate, FAD, flavoprotein; HET: MSE FAD GSH; 1.05A {Thermus thermophilus} PDB: 3g5q_A* 3g5r_A*
Probab=97.87 E-value=9.1e-06 Score=74.16 Aligned_cols=33 Identities=27% Similarity=0.195 Sum_probs=31.4
Q ss_pred CcEEEECCchhHHHHHHhhhccCceEEEEcCCC
Q 018704 63 PRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRN 95 (351)
Q Consensus 63 ~~VvIIG~G~aGl~aA~~L~~~g~~v~vie~~~ 95 (351)
+||+|||||+||+.||+.|++.|.+|+|+|+++
T Consensus 2 ~dViVIGgG~AG~~AA~~la~~G~~V~liE~~~ 34 (443)
T 3g5s_A 2 ERVNVVGAGLAGSEAAWTLLRLGVPVRLFEMRP 34 (443)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCEEEECCTT
T ss_pred CCEEEECchHHHHHHHHHHHHCCCcEEEEeccC
Confidence 689999999999999999999999999999765
No 284
>3i3l_A Alkylhalidase CMLS; flavin-dependent halogenase, chloramphenicol biosynthesis, halogenation reaction, structural genomics; HET: FAD; 2.20A {Streptomyces venezuelae}
Probab=97.87 E-value=0.0001 Score=71.93 Aligned_cols=92 Identities=21% Similarity=0.325 Sum_probs=69.3
Q ss_pred CeEEEECCChHHHHHHHHHHHHHHHHHHhhhcCCCCccEEEEEeCCCCCC------------------------------
Q 018704 231 LHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEILS------------------------------ 280 (351)
Q Consensus 231 ~~v~VvGgG~~a~e~a~~l~~~~~~~~~~~~~~~~~~~~v~~~~~~~~l~------------------------------ 280 (351)
.+|+|||||.+|+-+|..|++.| .+|+++++.....
T Consensus 24 ~DVvIVGgG~AGl~aA~~Lar~G--------------~~V~LiEr~~~~~~~~G~~l~p~~~~~l~~lGl~~~l~~~~~~ 89 (591)
T 3i3l_A 24 SKVAIIGGGPAGSVAGLTLHKLG--------------HDVTIYERSAFPRYRVGESLLPGTMSILNRLGLQEKIDAQNYV 89 (591)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT--------------CEEEEECSSCSSCCCCCCBCCHHHHHHHHHTTCHHHHHHHCCE
T ss_pred CCEEEECcCHHHHHHHHHHHcCC--------------CCEEEEcCCCCCCCceeeeECHHHHHHHHHcCCcHHHHhcCCc
Confidence 48999999999999999999876 7788887752100
Q ss_pred ----------------------------------CCc-HHHHHHHHHHhhhcCcEEEcC-eEEEEeCC-----eEEec-C
Q 018704 281 ----------------------------------SFD-DRLRHYATTQLSKSGVRLVRG-IVKDVDSQ-----KLILN-D 318 (351)
Q Consensus 281 ----------------------------------~~~-~~~~~~~~~~l~~~gV~~~~~-~v~~v~~~-----~v~~~-~ 318 (351)
.++ ..+...+.+.+++.||+++.+ +|+++..+ +|.+. +
T Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~r~~l~~~L~~~a~~~Gv~i~~g~~V~~v~~~~g~~~~V~~~~~ 169 (591)
T 3i3l_A 90 KKPSATFLWGQDQAPWTFSFAAPKVAPWVFDHAVQVKREEFDKLLLDEARSRGITVHEETPVTDVDLSDPDRVVLTVRRG 169 (591)
T ss_dssp EECEEEEECSSSCCCEEEECCCC--CTTCCSCEEECCHHHHHHHHHHHHHHTTCEEETTCCEEEEECCSTTCEEEEEEET
T ss_pred ccCCcEEEecCCCccceeecccccccccccCeeEEEcHHHHHHHHHHHHHhCCCEEEeCCEEEEEEEcCCCEEEEEEecC
Confidence 001 234556677778889999999 59988642 46666 6
Q ss_pred C--cEEeccEEEEecCCCCc
Q 018704 319 G--TEVPYGLLVWSTGVGPS 336 (351)
Q Consensus 319 g--~~~~~D~vi~a~G~~p~ 336 (351)
| .++.+|.||.|+|....
T Consensus 170 G~~~~i~AdlVV~AdG~~S~ 189 (591)
T 3i3l_A 170 GESVTVESDFVIDAGGSGGP 189 (591)
T ss_dssp TEEEEEEESEEEECCGGGCH
T ss_pred CceEEEEcCEEEECCCCcch
Confidence 7 57999999999998764
No 285
>1lqt_A FPRA; NADP+ derivative, oxidoreductase, structural G PSI, protein structure initiative, TB structural genomics consortium, TBSGC; HET: FAD ODP; 1.05A {Mycobacterium tuberculosis} SCOP: c.3.1.1 c.4.1.1 PDB: 1lqu_A* 2c7g_A*
Probab=97.87 E-value=8.8e-06 Score=76.93 Aligned_cols=93 Identities=12% Similarity=0.138 Sum_probs=66.3
Q ss_pred CeEEEECCChHHHHHHHHHHH-HHHHHHHhhhcCCCCccEEEEEeCCCCC---------CC--CcHHHHHHHHHHhhhcC
Q 018704 231 LHCVVVGGGPTGVEFSGELSD-FIMRDVRQRYSHVKDYIHVTLIEANEIL---------SS--FDDRLRHYATTQLSKSG 298 (351)
Q Consensus 231 ~~v~VvGgG~~a~e~a~~l~~-~~~~~~~~~~~~~~~~~~v~~~~~~~~l---------~~--~~~~~~~~~~~~l~~~g 298 (351)
++|+|||||+.|+.+|..|.+ ... ....+.+|+++++.+.. +. ...++...+.+.+++.+
T Consensus 4 ~~VvIIG~G~aGl~aA~~L~~~~~~--------~~~~g~~V~lie~~~~~gg~~~~gv~p~~~~~~~~~~~~~~~~~~~~ 75 (456)
T 1lqt_A 4 YYIAIVGSGPSAFFAAASLLKAADT--------TEDLDMAVDMLEMLPTPWGLVRSGVAPDHPKIKSISKQFEKTAEDPR 75 (456)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHHHH--------STTCCEEEEEEESSSSCSTHHHHTSCTTCTGGGGGHHHHHHHHTSTT
T ss_pred CEEEEECcCHHHHHHHHHHHhhCcc--------ccCCCCeEEEEecCCCCCCccccccCCCCCCHHHHHHHHHHHHhcCC
Confidence 489999999999999999987 520 00013899999997422 11 22456677777888889
Q ss_pred cEEEcCeEEEEeCCeEEecCCcEEeccEEEEecCCCC
Q 018704 299 VRLVRGIVKDVDSQKLILNDGTEVPYGLLVWSTGVGP 335 (351)
Q Consensus 299 V~~~~~~v~~v~~~~v~~~~g~~~~~D~vi~a~G~~p 335 (351)
|+++.+. .+ +..|.+.++ ++.+|.||+|||..+
T Consensus 76 v~~~~~v--~v-~~~v~~~~~-~~~~d~lViAtG~~~ 108 (456)
T 1lqt_A 76 FRFFGNV--VV-GEHVQPGEL-SERYDAVIYAVGAQS 108 (456)
T ss_dssp EEEEESC--CB-TTTBCHHHH-HHHSSEEEECCCCCE
T ss_pred CEEEeeE--EE-CCEEEECCC-eEeCCEEEEeeCCCC
Confidence 9999883 12 334555555 478999999999973
No 286
>4dsg_A UDP-galactopyranose mutase; rossmann fold, flavin adenine dinucleotide, isomerase; HET: FAD UDP; 2.25A {Trypanosoma cruzi} PDB: 4dsh_A*
Probab=97.87 E-value=9.2e-06 Score=77.43 Aligned_cols=37 Identities=14% Similarity=0.141 Sum_probs=33.9
Q ss_pred CCCcEEEECCchhHHHHHHhhhccC-ceEEEEcCCCcc
Q 018704 61 EKPRVVVLGSGWAGCRLMKGIDTSL-YDVVCVSPRNHM 97 (351)
Q Consensus 61 ~~~~VvIIG~G~aGl~aA~~L~~~g-~~v~vie~~~~~ 97 (351)
+.+||+|||||++||++|+.|++.| .+|+|+|+++..
T Consensus 8 ~~~~v~iiG~G~~Gl~~A~~l~~~g~~~v~v~E~~~~~ 45 (484)
T 4dsg_A 8 LTPKIVIIGAGPTGLGAAVRLTELGYKNWHLYECNDTP 45 (484)
T ss_dssp CSCCEEEECCSHHHHHHHHHHHHTTCCSEEEEESSSSS
T ss_pred cCCCEEEECcCHHHHHHHHHHHHcCCCCEEEEeCCCCC
Confidence 4589999999999999999999998 799999998765
No 287
>1yvv_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae} PDB: 3kkj_A*
Probab=97.86 E-value=9.5e-05 Score=66.47 Aligned_cols=89 Identities=13% Similarity=0.206 Sum_probs=62.1
Q ss_pred eEEEECCChHHHHHHHHHHHHHHHHHHhhhcCCCCccEEEEEeCCCCC---------------------CCCcHHHHHHH
Q 018704 232 HCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEIL---------------------SSFDDRLRHYA 290 (351)
Q Consensus 232 ~v~VvGgG~~a~e~a~~l~~~~~~~~~~~~~~~~~~~~v~~~~~~~~l---------------------~~~~~~~~~~~ 290 (351)
+|+|||||.+|+-+|..|++.| .+|+++++.+.. ....+.+.+.+
T Consensus 4 dV~IIGaG~~Gl~~A~~L~~~G--------------~~V~vlE~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 69 (336)
T 1yvv_A 4 PIAIIGTGIAGLSAAQALTAAG--------------HQVHLFDKSRGSGGRMSSKRSDAGALDMGAQYFTARDRRFATAV 69 (336)
T ss_dssp CEEEECCSHHHHHHHHHHHHTT--------------CCEEEECSSSSSCGGGCEEEETTEEEECSCCCBCCCSHHHHHHH
T ss_pred eEEEECCcHHHHHHHHHHHHCC--------------CcEEEEECCCCCcccceeEecCCCeEecCCCeEecCCHHHHHHH
Confidence 7999999999999999999877 899999986321 00112222222
Q ss_pred HH-------------------------------------------HhhhcCcEEEcCe-EEEEeC--C--eEEecCCcEE
Q 018704 291 TT-------------------------------------------QLSKSGVRLVRGI-VKDVDS--Q--KLILNDGTEV 322 (351)
Q Consensus 291 ~~-------------------------------------------~l~~~gV~~~~~~-v~~v~~--~--~v~~~~g~~~ 322 (351)
.+ .+. .|++++++. |++++. + .|.+.+|+.+
T Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~-~g~~i~~~~~v~~i~~~~~~~~v~~~~g~~~ 148 (336)
T 1yvv_A 70 KQWQAQGHVAEWTPLLYNFHAGRLSPSPDEQVRWVGKPGMSAITRAMR-GDMPVSFSCRITEVFRGEEHWNLLDAEGQNH 148 (336)
T ss_dssp HHHHHHTSEEEECCCEEEESSSBCCCCCTTSCEEEESSCTHHHHHHHH-TTCCEECSCCEEEEEECSSCEEEEETTSCEE
T ss_pred HHHHhCCCeeeccccceeccCcccccCCCCCccEEcCccHHHHHHHHH-ccCcEEecCEEEEEEEeCCEEEEEeCCCcCc
Confidence 11 112 278999995 888864 3 4566788766
Q ss_pred e-ccEEEEecCCCC
Q 018704 323 P-YGLLVWSTGVGP 335 (351)
Q Consensus 323 ~-~D~vi~a~G~~p 335 (351)
. +|.||.|+|...
T Consensus 149 ~~a~~vV~a~g~~~ 162 (336)
T 1yvv_A 149 GPFSHVIIATPAPQ 162 (336)
T ss_dssp EEESEEEECSCHHH
T ss_pred cccCEEEEcCCHHH
Confidence 4 999999999653
No 288
>2pyx_A Tryptophan halogenase; structural genomics, JOI for structural genomics, JCSG, protein structure initiative biosynthetic protein; HET: MSE TLA PG4; 1.50A {Shewanella frigidimarina}
Probab=97.86 E-value=8.7e-06 Score=78.44 Aligned_cols=34 Identities=12% Similarity=0.275 Sum_probs=31.7
Q ss_pred CCcEEEECCchhHHHHHHhhhc------------cCceEEEEcCCC
Q 018704 62 KPRVVVLGSGWAGCRLMKGIDT------------SLYDVVCVSPRN 95 (351)
Q Consensus 62 ~~~VvIIG~G~aGl~aA~~L~~------------~g~~v~vie~~~ 95 (351)
.+||||||||+||+++|..|++ .|++|+|||+..
T Consensus 7 ~~dVvIVGgG~aGl~aA~~La~~~~~~~~~~~~~~G~~V~liE~~~ 52 (526)
T 2pyx_A 7 ITEIIIVGGGTAGWITAGLLAAEHNVDKGVLAHSPKLNITLIESPD 52 (526)
T ss_dssp CCEEEEECCHHHHHHHHHHHHHHHHEETTEECSSCSCEEEEEECSS
T ss_pred CCeEEEECCCHHHHHHHHHHHhhhccccccccCCCCCeEEEEeCCC
Confidence 4799999999999999999999 899999999764
No 289
>3axb_A Putative oxidoreductase; dinucleotide-binding fold; HET: FAD; 1.92A {Aeropyrum pernix} PDB: 3vqr_A*
Probab=97.85 E-value=4.7e-06 Score=78.55 Aligned_cols=34 Identities=21% Similarity=0.166 Sum_probs=31.6
Q ss_pred CCCcEEEECCchhHHHHHHhhhccC-ceEEEEcCC
Q 018704 61 EKPRVVVLGSGWAGCRLMKGIDTSL-YDVVCVSPR 94 (351)
Q Consensus 61 ~~~~VvIIG~G~aGl~aA~~L~~~g-~~v~vie~~ 94 (351)
..+||+|||||++|+++|+.|++.| .+|+|||++
T Consensus 22 ~~~dVvIIGgGiaGls~A~~La~~G~~~V~vlE~~ 56 (448)
T 3axb_A 22 PRFDYVVVGAGVVGLAAAYYLKVWSGGSVLVVDAG 56 (448)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHHHCSCEEEEESS
T ss_pred CcCCEEEECcCHHHHHHHHHHHhCCCCcEEEEccC
Confidence 3479999999999999999999999 999999993
No 290
>1cjc_A Protein (adrenodoxin reductase); flavoenzyme, MAD analysis, electron transferase, oxidoreductase; HET: FAD; 1.70A {Bos taurus} SCOP: c.3.1.1 c.4.1.1 PDB: 1e1k_A* 1e1l_A* 1e1m_A* 1e1n_A* 1e6e_A*
Probab=97.83 E-value=1.5e-05 Score=75.34 Aligned_cols=88 Identities=18% Similarity=0.244 Sum_probs=65.8
Q ss_pred CeEEEECCChHHHHHHHHHHHHHHHHHHhhhcCCCCccEEEEEeCCCCC---------CCC--cHHHHHHHHHHhhhcCc
Q 018704 231 LHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEIL---------SSF--DDRLRHYATTQLSKSGV 299 (351)
Q Consensus 231 ~~v~VvGgG~~a~e~a~~l~~~~~~~~~~~~~~~~~~~~v~~~~~~~~l---------~~~--~~~~~~~~~~~l~~~gV 299 (351)
++|+|||||+.|+.+|..|.+.+ ++.+|+++++.+.+ +.+ ..++...+.+.+++.||
T Consensus 7 ~~vvIIG~G~aGl~aA~~l~~~g------------~~~~V~vie~~~~~gg~~~~g~~p~~~~~~~~~~~~~~~~~~~gv 74 (460)
T 1cjc_A 7 PQICVVGSGPAGFYTAQHLLKHH------------SRAHVDIYEKQLVPFGLVRFGVAPDHPEVKNVINTFTQTARSDRC 74 (460)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHC------------SSCEEEEECSSSSSCTHHHHTSCTTCGGGGGHHHHHHHHHTSTTE
T ss_pred ceEEEECcCHHHHHHHHHHHhcC------------CCCCEEEEeCCCcCCceeecccCCCCccHHHHHHHHHHHHHhCCc
Confidence 59999999999999999998753 23789999987422 222 23566677788888999
Q ss_pred EEEcCe-EEEEeCCeEEecCCcEEeccEEEEecCCCC
Q 018704 300 RLVRGI-VKDVDSQKLILNDGTEVPYGLLVWSTGVGP 335 (351)
Q Consensus 300 ~~~~~~-v~~v~~~~v~~~~g~~~~~D~vi~a~G~~p 335 (351)
+++.+. + ...|.+.+ .++.+|.||+|||..|
T Consensus 75 ~~~~~~~v----~~~V~~~~-~~~~~d~lVlAtGs~~ 106 (460)
T 1cjc_A 75 AFYGNVEV----GRDVTVQE-LQDAYHAVVLSYGAED 106 (460)
T ss_dssp EEEBSCCB----TTTBCHHH-HHHHSSEEEECCCCCE
T ss_pred EEEeeeEE----eeEEEecc-ceEEcCEEEEecCcCC
Confidence 999985 4 22344444 3478999999999885
No 291
>1d5t_A Guanine nucleotide dissociation inhibitor; ultra-high resolution, hydrolase inhibitor; 1.04A {Bos taurus} SCOP: c.3.1.3 d.16.1.6 PDB: 1lv0_A* 1gnd_A
Probab=97.81 E-value=1.5e-05 Score=74.83 Aligned_cols=53 Identities=15% Similarity=0.140 Sum_probs=42.1
Q ss_pred HHHHHHHHHHhhhcCcEEEcCe-EEEEe--CCeE--EecCCcEEeccEEEEecCCCCc
Q 018704 284 DRLRHYATTQLSKSGVRLVRGI-VKDVD--SQKL--ILNDGTEVPYGLLVWSTGVGPS 336 (351)
Q Consensus 284 ~~~~~~~~~~l~~~gV~~~~~~-v~~v~--~~~v--~~~~g~~~~~D~vi~a~G~~p~ 336 (351)
..+.+.+.+.+++.|+++++++ |+++. ++++ +..+|+++.||.||+|+|..+.
T Consensus 234 ~~l~~~l~~~~~~~G~~i~~~~~V~~I~~~~~~v~~v~~~g~~~~ad~VV~a~~~~~~ 291 (433)
T 1d5t_A 234 GELPQGFARLSAIYGGTYMLNKPVDDIIMENGKVVGVKSEGEVARCKQLICDPSYVPD 291 (433)
T ss_dssp THHHHHHHHHHHHHTCCCBCSCCCCEEEEETTEEEEEEETTEEEECSEEEECGGGCGG
T ss_pred HHHHHHHHHHHHHcCCEEECCCEEEEEEEeCCEEEEEEECCeEEECCEEEECCCCCcc
Confidence 4778888888888999999995 87774 3433 2357888999999999998875
No 292
>1w4x_A Phenylacetone monooxygenase; baeyer-villiger, FAD; HET: FAD; 1.7A {Thermobifida fusca} SCOP: c.3.1.5 c.3.1.5 PDB: 2ylr_A* 2yls_A* 2ylt_A* 2ym1_A* 2ylw_A* 2ym2_A* 2ylx_A* 2ylz_A*
Probab=97.81 E-value=0.0001 Score=71.21 Aligned_cols=89 Identities=19% Similarity=0.205 Sum_probs=65.2
Q ss_pred eEEEECCChHHHHHHHHHHHHHHHHHHhhhcCCCCccEEEEEeCCCCC---------CC-------------Cc------
Q 018704 232 HCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEIL---------SS-------------FD------ 283 (351)
Q Consensus 232 ~v~VvGgG~~a~e~a~~l~~~~~~~~~~~~~~~~~~~~v~~~~~~~~l---------~~-------------~~------ 283 (351)
+|+|||||.+|+-+|..|.+.| .+|+++++...+ +. +.
T Consensus 18 dVvIIGaG~aGl~aA~~L~~~G--------------~~v~iiE~~~~~GG~w~~~~~pg~~~d~~~~~~~~~f~~~~~~~ 83 (542)
T 1w4x_A 18 DVLVVGAGFSGLYALYRLRELG--------------RSVHVIETAGDVGGVWYWNRYPGARCDIESIEYCYSFSEEVLQE 83 (542)
T ss_dssp EEEEECCSHHHHHHHHHHHHTT--------------CCEEEECSSSSSCTHHHHCCCTTCBCSSCTTTSSCCSCHHHHHH
T ss_pred CEEEECccHHHHHHHHHHHhCC--------------CCEEEEeCCCCCCCcccccCCCceeecccccccccccChhhhhc
Confidence 8999999999999999999876 889999985311 10 01
Q ss_pred ----------HHHHHHHHHHhhhcC--cEEEcCe-EEEEeC--C----eEEecCCcEEeccEEEEecCCC
Q 018704 284 ----------DRLRHYATTQLSKSG--VRLVRGI-VKDVDS--Q----KLILNDGTEVPYGLLVWSTGVG 334 (351)
Q Consensus 284 ----------~~~~~~~~~~l~~~g--V~~~~~~-v~~v~~--~----~v~~~~g~~~~~D~vi~a~G~~ 334 (351)
+++.+.+.+.+++.+ +.++.+. |.+++. + .|.+.+|+++.+|.||+|+|..
T Consensus 84 ~~~~~~~~~~~~i~~yl~~~~~~~~l~~~i~~~~~V~~~~~~~~~~~w~V~~~~G~~~~ad~vV~AtG~~ 153 (542)
T 1w4x_A 84 WNWTERYASQPEILRYINFVADKFDLRSGITFHTTVTAAAFDEATNTWTVDTNHGDRIRARYLIMASGQL 153 (542)
T ss_dssp CCCCBSSCBHHHHHHHHHHHHHHTTGGGGEECSCCEEEEEEETTTTEEEEEETTCCEEEEEEEEECCCSC
T ss_pred cCcccccCCHHHHHHHHHHHHHHcCCCceEEcCcEEEEEEEcCCCCeEEEEECCCCEEEeCEEEECcCCC
Confidence 234445555555554 5688884 887752 2 5777889889999999999964
No 293
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=97.80 E-value=0.00039 Score=65.60 Aligned_cols=34 Identities=21% Similarity=0.383 Sum_probs=31.4
Q ss_pred CCcEEEECCchhHHHHHHhhhccCceEEEEcCCC
Q 018704 62 KPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRN 95 (351)
Q Consensus 62 ~~~VvIIG~G~aGl~aA~~L~~~g~~v~vie~~~ 95 (351)
.++|+|+|+|-.|.+.|..|.+.|++|++||+++
T Consensus 3 ~M~iiI~G~G~vG~~la~~L~~~~~~v~vId~d~ 36 (461)
T 4g65_A 3 AMKIIILGAGQVGGTLAENLVGENNDITIVDKDG 36 (461)
T ss_dssp CEEEEEECCSHHHHHHHHHTCSTTEEEEEEESCH
T ss_pred cCEEEEECCCHHHHHHHHHHHHCCCCEEEEECCH
Confidence 3689999999999999999999999999999764
No 294
>1y0p_A Fumarate reductase flavoprotein subunit; flavocytochrome, mesaconate, oxidoreductase; HET: HEM FAD; 1.50A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1qjd_A* 2b7s_A* 1jry_A* 2b7r_A* 1ksu_A* 1jrz_A* 1jrx_A* 1m64_A* 1p2h_A* 1p2e_A* 1kss_A* 1e39_A* 1q9i_A* 1lj1_A*
Probab=97.80 E-value=9.5e-05 Score=71.91 Aligned_cols=51 Identities=12% Similarity=0.009 Sum_probs=37.3
Q ss_pred HHHHHHHHhhhcCcEEEcCe-EEEEeC---C---eEEec--CCc--EEeccEEEEecCCCCc
Q 018704 286 LRHYATTQLSKSGVRLVRGI-VKDVDS---Q---KLILN--DGT--EVPYGLLVWSTGVGPS 336 (351)
Q Consensus 286 ~~~~~~~~l~~~gV~~~~~~-v~~v~~---~---~v~~~--~g~--~~~~D~vi~a~G~~p~ 336 (351)
+.+.+.+.+++.||+++.+. |+++.. + +|++. +|+ ++.+|.||+|+|....
T Consensus 257 l~~~L~~~~~~~gv~i~~~~~v~~l~~~~~g~v~Gv~~~~~~g~~~~i~a~~VVlAtGg~~~ 318 (571)
T 1y0p_A 257 VVQVLYDNAVKRNIDLRMNTRGIEVLKDDKGTVKGILVKGMYKGYYWVKADAVILATGGFAK 318 (571)
T ss_dssp HHHHHHHHHHHTTCEEESSEEEEEEEECTTSCEEEEEEEETTTEEEEEECSEEEECCCCCTT
T ss_pred HHHHHHHHHHhcCCEEEeCCEeeEeEEcCCCeEEEEEEEeCCCcEEEEECCeEEEeCCCccc
Confidence 44556666778899999995 888752 2 25554 675 6889999999997654
No 295
>3rp8_A Flavoprotein monooxygenase; FAD-binding protein, oxidoreductase; HET: FAD; 1.97A {Klebsiella pneumoniae} PDB: 3rp7_A* 3rp6_A*
Probab=97.80 E-value=0.00014 Score=67.35 Aligned_cols=90 Identities=18% Similarity=0.244 Sum_probs=65.2
Q ss_pred CeEEEECCChHHHHHHHHHHHHHHHHHHhhhcCCCCccEEEEEeCCCCCCC------Cc---------------------
Q 018704 231 LHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEILSS------FD--------------------- 283 (351)
Q Consensus 231 ~~v~VvGgG~~a~e~a~~l~~~~~~~~~~~~~~~~~~~~v~~~~~~~~l~~------~~--------------------- 283 (351)
.+|+|||||.+|+-+|..|++.| .+|+++++...... +.
T Consensus 24 ~dV~IVGaG~aGl~~A~~La~~G--------------~~V~v~E~~~~~~~~~~~~~l~~~~~~~l~~lg~~~~~~~~~~ 89 (407)
T 3rp8_A 24 MKAIVIGAGIGGLSAAVALKQSG--------------IDCDVYEAVKEIKPVGAAISVWPNGVKCMAHLGMGDIMETFGG 89 (407)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTT--------------CEEEEEESSSCC----CEEEECHHHHHHHHHTTCHHHHHHHSC
T ss_pred CEEEEECCCHHHHHHHHHHHhCC--------------CCEEEEeCCCCCCCcCeeEEECHHHHHHHHHCCCHHHHHhhcC
Confidence 58999999999999999999876 78888887532100 00
Q ss_pred -------------------------------------HHHHHHHHHHhhhcCcEEEcCe-EEEEeC--C--eEEecCCcE
Q 018704 284 -------------------------------------DRLRHYATTQLSKSGVRLVRGI-VKDVDS--Q--KLILNDGTE 321 (351)
Q Consensus 284 -------------------------------------~~~~~~~~~~l~~~gV~~~~~~-v~~v~~--~--~v~~~~g~~ 321 (351)
..+.+.+.+.+.+ ++++.+. |++++. + .+.+.+|++
T Consensus 90 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~--~~i~~~~~v~~i~~~~~~v~v~~~~g~~ 167 (407)
T 3rp8_A 90 PLRRMAYRDFRSGENMTQFSLAPLIERTGSRPCPVSRAELQREMLDYWGR--DSVQFGKRVTRCEEDADGVTVWFTDGSS 167 (407)
T ss_dssp CCCEEEEEETTTCCEEEEEECHHHHHHHSSCCEEEEHHHHHHHHHHHHCG--GGEEESCCEEEEEEETTEEEEEETTSCE
T ss_pred CCcceEEEECCCCCEeEEecchhhhhhcCCceEEEEHHHHHHHHHHhCCc--CEEEECCEEEEEEecCCcEEEEEcCCCE
Confidence 1233344444444 7888884 888754 3 466788999
Q ss_pred EeccEEEEecCCCCc
Q 018704 322 VPYGLLVWSTGVGPS 336 (351)
Q Consensus 322 ~~~D~vi~a~G~~p~ 336 (351)
+.+|.||.|.|....
T Consensus 168 ~~a~~vV~AdG~~S~ 182 (407)
T 3rp8_A 168 ASGDLLIAADGSHSA 182 (407)
T ss_dssp EEESEEEECCCTTCS
T ss_pred EeeCEEEECCCcChH
Confidence 999999999998765
No 296
>1chu_A Protein (L-aspartate oxidase); flavoenzyme, NAD biosynthesis, FAD, oxidoreductase; 2.20A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1knr_A* 1knp_A*
Probab=97.79 E-value=1.2e-05 Score=77.70 Aligned_cols=35 Identities=26% Similarity=0.317 Sum_probs=32.2
Q ss_pred CCCcEEEECCchhHHHHHHhhhccCceEEEEcCCCc
Q 018704 61 EKPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRNH 96 (351)
Q Consensus 61 ~~~~VvIIG~G~aGl~aA~~L~~~g~~v~vie~~~~ 96 (351)
..+||||||||+|||++|+.|++ |.+|+|||+.+.
T Consensus 7 ~~~DVvVVG~G~AGl~aAl~la~-G~~V~vlEk~~~ 41 (540)
T 1chu_A 7 HSCDVLIIGSGAAGLSLALRLAD-QHQVIVLSKGPV 41 (540)
T ss_dssp EECSEEEECCSHHHHHHHHHHTT-TSCEEEECSSCT
T ss_pred CCCCEEEECccHHHHHHHHHHhc-CCcEEEEECCCC
Confidence 34799999999999999999999 999999998764
No 297
>2rgh_A Alpha-glycerophosphate oxidase; flavoprotein oxidase, oxidoreductase; HET: FAD; 2.30A {Streptococcus SP} PDB: 2rgo_A*
Probab=97.79 E-value=1.3e-05 Score=78.06 Aligned_cols=34 Identities=12% Similarity=0.217 Sum_probs=32.2
Q ss_pred CCcEEEECCchhHHHHHHhhhccCceEEEEcCCC
Q 018704 62 KPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRN 95 (351)
Q Consensus 62 ~~~VvIIG~G~aGl~aA~~L~~~g~~v~vie~~~ 95 (351)
.+||+|||||++|+++|+.|+++|++|+|||+++
T Consensus 32 ~~DVvVIGgGi~G~~~A~~La~rG~~V~LlE~~~ 65 (571)
T 2rgh_A 32 ELDLLIIGGGITGAGVAVQAAASGIKTGLIEMQD 65 (571)
T ss_dssp CBSEEEECCSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCcEEEEeCCC
Confidence 4899999999999999999999999999999875
No 298
>2wdq_A Succinate dehydrogenase flavoprotein subunit; succinate dehydrogenase activity, cell inner membrane, trica acid cycle; HET: FAD HEM CBE; 2.40A {Escherichia coli} PDB: 1nen_A* 2acz_A* 1nek_A* 2wdr_A* 2wdv_A* 2wp9_A* 2ws3_A* 2wu2_A* 2wu5_A*
Probab=97.78 E-value=8.4e-06 Score=79.55 Aligned_cols=35 Identities=29% Similarity=0.205 Sum_probs=32.4
Q ss_pred CCcEEEECCchhHHHHHHhhhccCceEEEEcCCCc
Q 018704 62 KPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRNH 96 (351)
Q Consensus 62 ~~~VvIIG~G~aGl~aA~~L~~~g~~v~vie~~~~ 96 (351)
.+||||||||+|||+||+.|++.|.+|+|||+...
T Consensus 7 ~~DVvVVGaG~AGl~AA~~la~~G~~V~vlEK~~~ 41 (588)
T 2wdq_A 7 EFDAVVIGAGGAGMRAALQISQSGQTCALLSKVFP 41 (588)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSCG
T ss_pred cCCEEEECcCHHHHHHHHHHHHCCCcEEEEecCCC
Confidence 47999999999999999999999999999998754
No 299
>3c4n_A Uncharacterized protein DR_0571; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.40A {Deinococcus radiodurans R1}
Probab=97.76 E-value=4.9e-05 Score=70.58 Aligned_cols=59 Identities=19% Similarity=0.299 Sum_probs=40.7
Q ss_pred HHHHHHHHhhhcCcEEEcCe-EE---------EEeC--C--eEEecCCcEEeccEEEEecCCCCccccc-cCCCC
Q 018704 286 LRHYATTQLSKSGVRLVRGI-VK---------DVDS--Q--KLILNDGTEVPYGLLVWSTGVGPSTLVK-SLDLP 345 (351)
Q Consensus 286 ~~~~~~~~l~~~gV~~~~~~-v~---------~v~~--~--~v~~~~g~~~~~D~vi~a~G~~p~~~~~-~~gl~ 345 (351)
+...+.+.+++.|++++.+. |+ ++.. + .|.+.+| ++.||.||+|+|.....++. .+|+.
T Consensus 174 l~~~L~~~~~~~Gv~i~~~~~v~~~~g~~~~~~i~~~~~~v~v~~~~g-~i~a~~VV~A~G~~s~~l~~~~~g~~ 247 (405)
T 3c4n_A 174 LALLAAQQAIGQGAGLLLNTRAELVPGGVRLHRLTVTNTHQIVVHETR-QIRAGVIIVAAGAAGPALVEQGLGLH 247 (405)
T ss_dssp HHHHHHHHHHTTTCEEECSCEEEEETTEEEEECBCC-------CBCCE-EEEEEEEEECCGGGHHHHHHHHHCCC
T ss_pred HHHHHHHHHHHCCCEEEcCCEEEeccccccccceEeeCCeEEEEECCc-EEECCEEEECCCccHHHHHHHhcCCC
Confidence 44556667778899999984 88 7753 2 2444455 79999999999988755555 54543
No 300
>2aqj_A Tryptophan halogenase, pRNA; flavin-dependent halogenase, helical bundle, sandwiched sheets, structural genomics; HET: TRP FAD; 1.80A {Pseudomonas fluorescens} PDB: 2apg_A* 2ar8_A* 2ard_A* 2jkc_A*
Probab=97.76 E-value=0.00024 Score=68.50 Aligned_cols=49 Identities=20% Similarity=0.277 Sum_probs=38.2
Q ss_pred HHHHHHhhhcCcEEEcCeEEEEeC--C----eEEecCCcEEeccEEEEecCCCCc
Q 018704 288 HYATTQLSKSGVRLVRGIVKDVDS--Q----KLILNDGTEVPYGLLVWSTGVGPS 336 (351)
Q Consensus 288 ~~~~~~l~~~gV~~~~~~v~~v~~--~----~v~~~~g~~~~~D~vi~a~G~~p~ 336 (351)
+.+.+.+++.||+++.++|+++.. + .|.+.+|+++.+|.||.|+|.+..
T Consensus 169 ~~L~~~a~~~gv~~~~~~v~~i~~~~~g~~~~v~~~~g~~i~ad~vV~A~G~~s~ 223 (538)
T 2aqj_A 169 DFLKRWAVERGVNRVVDEVVDVRLNNRGYISNLLTKEGRTLEADLFIDCSGMRGL 223 (538)
T ss_dssp HHHHHHHHHTTCEEEECCEEEEEECTTSCEEEEEETTSCEECCSEEEECCGGGCC
T ss_pred HHHHHHHHHCCCEEEEeeEeEEEEcCCCcEEEEEECCCcEEEeCEEEECCCCchh
Confidence 344555667899999998888753 2 467788888999999999998765
No 301
>2z3y_A Lysine-specific histone demethylase 1; chromatin, nucleosome, transcription, LSD1, alternative splicing, chromatin regulator, coiled coil; HET: F2N; 2.25A {Homo sapiens} SCOP: a.4.1.18 c.3.1.2 d.16.1.5 PDB: 2ejr_A* 2z5u_A* 3abt_A* 3abu_A* 2y48_A* 2v1d_A* 2h94_A* 2iw5_A* 2uxn_A* 2uxx_A* 2hko_A* 2dw4_A* 2x0l_A* 2l3d_A
Probab=97.75 E-value=2.4e-05 Score=77.50 Aligned_cols=38 Identities=21% Similarity=0.436 Sum_probs=34.8
Q ss_pred CCCCcEEEECCchhHHHHHHhhhccCceEEEEcCCCcc
Q 018704 60 NEKPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRNHM 97 (351)
Q Consensus 60 ~~~~~VvIIG~G~aGl~aA~~L~~~g~~v~vie~~~~~ 97 (351)
...++|+|||||++||++|+.|++.|++|+|+|+.+..
T Consensus 105 ~~~~~v~viG~G~~gl~~a~~l~~~g~~v~~~e~~~~~ 142 (662)
T 2z3y_A 105 KKTGKVIIIGSGVSGLAAARQLQSFGMDVTLLEARDRV 142 (662)
T ss_dssp SCCCEEEEECCBHHHHHHHHHHHHTTCEEEEECSSSSS
T ss_pred cCCCeEEEECcCHHHHHHHHHHHHCCCeEEEEecCCCC
Confidence 45689999999999999999999999999999998764
No 302
>1qo8_A Flavocytochrome C3 fumarate reductase; oxidoreductase; HET: HEM FAD; 2.15A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1
Probab=97.75 E-value=0.00014 Score=70.68 Aligned_cols=51 Identities=10% Similarity=0.025 Sum_probs=37.3
Q ss_pred HHHHHHHHhhhcCcEEEcCe-EEEEe--C-C---eEEec--CCc--EEeccEEEEecCCCCc
Q 018704 286 LRHYATTQLSKSGVRLVRGI-VKDVD--S-Q---KLILN--DGT--EVPYGLLVWSTGVGPS 336 (351)
Q Consensus 286 ~~~~~~~~l~~~gV~~~~~~-v~~v~--~-~---~v~~~--~g~--~~~~D~vi~a~G~~p~ 336 (351)
+...+.+.+++.||+++.+. |+++. + + +|++. +|+ ++.+|.||+|+|-...
T Consensus 252 l~~~L~~~~~~~gv~i~~~~~v~~l~~~~~g~v~Gv~~~~~~g~~~~i~A~~VVlAtGg~s~ 313 (566)
T 1qo8_A 252 IIDTLRKAAKEQGIDTRLNSRVVKLVVNDDHSVVGAVVHGKHTGYYMIGAKSVVLATGGYGM 313 (566)
T ss_dssp HHHHHHHHHHHTTCCEECSEEEEEEEECTTSBEEEEEEEETTTEEEEEEEEEEEECCCCCTT
T ss_pred HHHHHHHHHHhcCCEEEeCCEEEEEEECCCCcEEEEEEEeCCCcEEEEEcCEEEEecCCccc
Confidence 34555666778899999995 88875 2 2 35554 675 5889999999997654
No 303
>3p1w_A Rabgdi protein; GDI RAB, malaria, structural genomics consortium, SGC, trans PF10_0345, protein transport; 1.85A {Plasmodium falciparum 3D7}
Probab=97.74 E-value=1.7e-05 Score=74.86 Aligned_cols=51 Identities=10% Similarity=0.002 Sum_probs=42.2
Q ss_pred HHHHHHHHHHhhhcCcEEEcCe-EEEEeC---C---eEEecCCcEEeccEEEEecCCC
Q 018704 284 DRLRHYATTQLSKSGVRLVRGI-VKDVDS---Q---KLILNDGTEVPYGLLVWSTGVG 334 (351)
Q Consensus 284 ~~~~~~~~~~l~~~gV~~~~~~-v~~v~~---~---~v~~~~g~~~~~D~vi~a~G~~ 334 (351)
.++.+.+.+.+++.|++++.++ |+++.. + +|++.+|++++||.||.++|+.
T Consensus 256 ~~L~~aL~r~~~~~Gg~i~l~t~V~~I~~d~~g~v~gV~~~~G~~i~Ad~VI~a~~~~ 313 (475)
T 3p1w_A 256 GGIPEGFSRMCAINGGTFMLNKNVVDFVFDDDNKVCGIKSSDGEIAYCDKVICDPSYV 313 (475)
T ss_dssp THHHHHHHHHHHHC--CEESSCCEEEEEECTTSCEEEEEETTSCEEEEEEEEECGGGC
T ss_pred HHHHHHHHHHHHHcCCEEEeCCeEEEEEEecCCeEEEEEECCCcEEECCEEEECCCcc
Confidence 4788899999999999999995 988753 2 5778889899999999999998
No 304
>2bs2_A Quinol-fumarate reductase flavoprotein subunit A; 2Fe-2S, 3Fe-4S, 4Fe-4S, citric acid cycle, dihaem cytochrome B; HET: FAD HEM LMT; 1.78A {Wolinella succinogenes} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 2bs3_A* 1e7p_A* 2bs4_A* 1qlb_A*
Probab=97.73 E-value=1.9e-05 Score=77.97 Aligned_cols=35 Identities=20% Similarity=0.188 Sum_probs=32.5
Q ss_pred CCcEEEECCchhHHHHHHhhhccCceEEEEcCCCc
Q 018704 62 KPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRNH 96 (351)
Q Consensus 62 ~~~VvIIG~G~aGl~aA~~L~~~g~~v~vie~~~~ 96 (351)
.+||||||||.|||+||+.|++.|.+|+|||+...
T Consensus 5 ~~DVvVIGgG~AGL~AAl~aae~G~~V~vlEK~~~ 39 (660)
T 2bs2_A 5 YCDSLVIGGGLAGLRAAVATQQKGLSTIVLSLIPV 39 (660)
T ss_dssp ECSEEEECCSHHHHHHHHHHHTTTCCEEEECSSCG
T ss_pred cccEEEECchHHHHHHHHHHHHCCCcEEEEeccCC
Confidence 47999999999999999999999999999998654
No 305
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=97.73 E-value=6.4e-05 Score=74.84 Aligned_cols=101 Identities=15% Similarity=0.093 Sum_probs=65.7
Q ss_pred CCcEEEEC--CchhHHHHHHhhhccCceEEEEcCCCccccchhhhhhhcccccccccccchhccchhhhcCCCeEEEE-E
Q 018704 62 KPRVVVLG--SGWAGCRLMKGIDTSLYDVVCVSPRNHMVFTPLLASTCVGTLEFRSVAEPIARIQPAISREPGSYFFL-S 138 (351)
Q Consensus 62 ~~~VvIIG--~G~aGl~aA~~L~~~g~~v~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 138 (351)
..+|+||| +|+.|+.+|..|++.|.+|+++++.+.+.-. .........+ .......++.++. .
T Consensus 523 g~~VvViG~ggG~~g~e~A~~L~~~g~~Vtlv~~~~~l~~~----------~~~~~~~~~l----~~~l~~~GV~i~~~~ 588 (690)
T 3k30_A 523 GKKVVVYDDDHYYLGGVVAELLAQKGYEVSIVTPGAQVSSW----------TNNTFEVNRI----QRRLIENGVARVTDH 588 (690)
T ss_dssp SSEEEEEECSCSSHHHHHHHHHHHTTCEEEEEESSSSTTGG----------GGGGTCHHHH----HHHHHHTTCEEEESE
T ss_pred CCEEEEEcCCCCccHHHHHHHHHhCCCeeEEEecccccccc----------cccchhHHHH----HHHHHHCCCEEEcCc
Confidence 46799999 9999999999999999999999987753210 0000011111 1122334777665 4
Q ss_pred EeeeEeCCCCEEEEEeecCccccCCCceeEeeccEEEEecCCCcCC
Q 018704 139 HCAGIDTDNHVVHCETVTDELRTLEPWKFKISYDKLVIALGAEAST 184 (351)
Q Consensus 139 ~v~~i~~~~~~v~~~~~~~~~~~~~~~~~~~~~d~lviAtG~~p~~ 184 (351)
+|+.++.+...+......++ .++.+|.||+|+|..|..
T Consensus 589 ~V~~i~~~~~~v~~~~~~~~--------~~i~aD~VV~A~G~~p~~ 626 (690)
T 3k30_A 589 AVVAVGAGGVTVRDTYASIE--------RELECDAVVMVTARLPRE 626 (690)
T ss_dssp EEEEEETTEEEEEETTTCCE--------EEEECSEEEEESCEEECC
T ss_pred EEEEEECCeEEEEEccCCeE--------EEEECCEEEECCCCCCCh
Confidence 78888865433332111123 379999999999987654
No 306
>2h88_A Succinate dehydrogenase flavoprotein subunit; complex II, membrane protein, heme protein, iron sulfur PROT cytochrome B, oxidoreductase; HET: FAD BHG HEM UNL; 1.74A {Gallus gallus} PDB: 1yq4_A* 1yq3_A* 2fbw_A* 2h89_A* 2wqy_A* 1zoy_A* 1zp0_A* 3abv_A* 3ae1_A* 3ae2_A* 3ae3_A* 3ae4_A* 3ae5_A* 3ae6_A* 3ae7_A* 3ae8_A* 3ae9_A* 3aea_A* 3aeb_A* 3aec_A* ...
Probab=97.73 E-value=1.5e-05 Score=78.20 Aligned_cols=34 Identities=29% Similarity=0.467 Sum_probs=31.9
Q ss_pred CCcEEEECCchhHHHHHHhhhccCceEEEEcCCC
Q 018704 62 KPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRN 95 (351)
Q Consensus 62 ~~~VvIIG~G~aGl~aA~~L~~~g~~v~vie~~~ 95 (351)
.+||||||||+|||+||+.|++.|.+|+|||+..
T Consensus 18 ~~DVvVVG~G~AGl~AAl~aa~~G~~V~vlEK~~ 51 (621)
T 2h88_A 18 EFDAVVVGAGGAGLRAAFGLSEAGFNTACVTKLF 51 (621)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSC
T ss_pred cCCEEEECccHHHHHHHHHHHHCCCcEEEEeccC
Confidence 4799999999999999999999999999999864
No 307
>2xdo_A TETX2 protein; tetracycline degradation, tigecycline, flavin, bacteroides F oxidoreductase; HET: FAD; 2.09A {Bacteroides thetaiotaomicron} PDB: 2y6q_A* 2xyo_A* 2y6r_A* 3p9u_A*
Probab=97.72 E-value=0.00015 Score=67.06 Aligned_cols=90 Identities=17% Similarity=0.291 Sum_probs=62.5
Q ss_pred CeEEEECCChHHHHHHHHHHHHHHHHHHhhhcCCCCccEEEEEeCCCCCC------C--C-c---H--------------
Q 018704 231 LHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEILS------S--F-D---D-------------- 284 (351)
Q Consensus 231 ~~v~VvGgG~~a~e~a~~l~~~~~~~~~~~~~~~~~~~~v~~~~~~~~l~------~--~-~---~-------------- 284 (351)
.+|+|||||.+|+-+|..|.+.| .+|+++++..... . + + .
T Consensus 27 ~dV~IVGaG~aGl~~A~~L~~~G--------------~~v~v~E~~~~~~~~~~g~~~~~~~~~~~~~l~~~gl~~~~~~ 92 (398)
T 2xdo_A 27 KNVAIIGGGPVGLTMAKLLQQNG--------------IDVSVYERDNDREARIFGGTLDLHKGSGQEAMKKAGLLQTYYD 92 (398)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTT--------------CEEEEEECSSSTTCCCCSCCEECCTTTHHHHHHHTTCHHHHHH
T ss_pred CCEEEECCCHHHHHHHHHHHHCC--------------CCEEEEeCCCCccccccCCeeeeCCccHHHHHHhcChHHHHHH
Confidence 38999999999999999999876 8999999863110 0 0 0 0
Q ss_pred ------------------------------------HHHHHHHHHhhhcCcEEEcCe-EEEEeC--C--eEEecCCcEEe
Q 018704 285 ------------------------------------RLRHYATTQLSKSGVRLVRGI-VKDVDS--Q--KLILNDGTEVP 323 (351)
Q Consensus 285 ------------------------------------~~~~~~~~~l~~~gV~~~~~~-v~~v~~--~--~v~~~~g~~~~ 323 (351)
.+.+.+.+.+. +++++.+. |++++. + .|++.+|+++.
T Consensus 93 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~--~~~i~~~~~v~~i~~~~~~v~v~~~~g~~~~ 170 (398)
T 2xdo_A 93 LALPMGVNIADEKGNILSTKNVKPENRFDNPEINRNDLRAILLNSLE--NDTVIWDRKLVMLEPGKKKWTLTFENKPSET 170 (398)
T ss_dssp HCBCCCEEEECSSSEEEEECCCGGGTTSSCCEECHHHHHHHHHHTSC--TTSEEESCCEEEEEECSSSEEEEETTSCCEE
T ss_pred hhcccceEEECCCCCchhhccccccCCCCCceECHHHHHHHHHhhcC--CCEEEECCEEEEEEECCCEEEEEECCCcEEe
Confidence 01111111111 35677884 888864 2 46678898899
Q ss_pred ccEEEEecCCCCc
Q 018704 324 YGLLVWSTGVGPS 336 (351)
Q Consensus 324 ~D~vi~a~G~~p~ 336 (351)
+|.||.|.|....
T Consensus 171 ad~vV~AdG~~S~ 183 (398)
T 2xdo_A 171 ADLVILANGGMSK 183 (398)
T ss_dssp ESEEEECSCTTCS
T ss_pred cCEEEECCCcchh
Confidence 9999999998765
No 308
>1pn0_A Phenol 2-monooxygenase; two dimers, TLS refinement, oxidoreductase; HET: FAD; 1.70A {Trichosporon cutaneum} SCOP: c.3.1.2 c.47.1.10 d.16.1.2 PDB: 1foh_A*
Probab=97.72 E-value=1.6e-05 Score=78.75 Aligned_cols=35 Identities=20% Similarity=0.248 Sum_probs=32.3
Q ss_pred CCcEEEECCchhHHHHHHhhhc-----cCceEEEEcCCCc
Q 018704 62 KPRVVVLGSGWAGCRLMKGIDT-----SLYDVVCVSPRNH 96 (351)
Q Consensus 62 ~~~VvIIG~G~aGl~aA~~L~~-----~g~~v~vie~~~~ 96 (351)
.+||+||||||+||++|..|++ .|++|+|||+.+.
T Consensus 8 ~~dVlIVGaGpaGL~lA~~La~~~~~~~Gi~v~viE~~~~ 47 (665)
T 1pn0_A 8 YCDVLIVGAGPAGLMAARVLSEYVRQKPDLKVRIIDKRST 47 (665)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHHHHHSTTCCEEEECSSSS
T ss_pred CCcEEEECcCHHHHHHHHHHhccccccCCCCEEEEeCCCC
Confidence 4799999999999999999999 9999999997654
No 309
>2xag_A Lysine-specific histone demethylase 1; amine oxidase, chromatin regulator, histone inhibitor binding, methylation, nucleosome core, oxidoreductase; HET: FAD TCF; 3.10A {Homo sapiens} PDB: 2xaf_A* 2xah_A* 2xaj_A* 2xaq_A* 2xas_A* 2com_A
Probab=97.71 E-value=2.9e-05 Score=78.57 Aligned_cols=38 Identities=21% Similarity=0.436 Sum_probs=34.7
Q ss_pred CCCCcEEEECCchhHHHHHHhhhccCceEEEEcCCCcc
Q 018704 60 NEKPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRNHM 97 (351)
Q Consensus 60 ~~~~~VvIIG~G~aGl~aA~~L~~~g~~v~vie~~~~~ 97 (351)
...++|+|||||++||+||+.|++.|++|+|+|+.+..
T Consensus 276 ~~~~~v~viG~G~aGl~~A~~l~~~g~~v~v~E~~~~~ 313 (852)
T 2xag_A 276 KKTGKVIIIGSGVSGLAAARQLQSFGMDVTLLEARDRV 313 (852)
T ss_dssp SCCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSS
T ss_pred CCCCeEEEECCCHHHHHHHHHHHHCCCcEEEEEecCcC
Confidence 44679999999999999999999999999999998764
No 310
>3fmw_A Oxygenase; mithramycin, baeyer-villiger, flavin binding protein, oxidoreductase; HET: FAD; 2.89A {Streptomyces argillaceus}
Probab=97.71 E-value=0.00014 Score=70.69 Aligned_cols=91 Identities=23% Similarity=0.310 Sum_probs=69.1
Q ss_pred eEEEECCChHHHHHHHHHHHHHHHHHHhhhcCCCCccEEEEEeCCCCCC-------------------------------
Q 018704 232 HCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEILS------------------------------- 280 (351)
Q Consensus 232 ~v~VvGgG~~a~e~a~~l~~~~~~~~~~~~~~~~~~~~v~~~~~~~~l~------------------------------- 280 (351)
.|+|||||.+|+-+|..|++.| .+|+++++.....
T Consensus 51 DVvIVGaG~aGL~~A~~La~~G--------------~~V~VlEr~~~~~~~~r~~~l~~~s~~~l~~lGl~~~l~~~~~~ 116 (570)
T 3fmw_A 51 DVVVVGGGPVGLMLAGELRAGG--------------VGALVLEKLVEPVGHDRAGALHIRTVETLDLRGLLDRFLEGTQV 116 (570)
T ss_dssp CEEEECCSHHHHHHHHHHHHTT--------------CCEEEEBSCSSCCCSSSCCCBCHHHHHHHHTTTCHHHHTTSCCB
T ss_pred CEEEECcCHHHHHHHHHHHHCC--------------CCEEEEcCCCCCCCCceEEEECHHHHHHHHHcCChHHHHhcCcc
Confidence 8999999999999999999876 7888888642100
Q ss_pred ------------C---------------C-cHHHHHHHHHHhhhcCcEEEcC-eEEEEeCC----eEEe--cCC-cEEec
Q 018704 281 ------------S---------------F-DDRLRHYATTQLSKSGVRLVRG-IVKDVDSQ----KLIL--NDG-TEVPY 324 (351)
Q Consensus 281 ------------~---------------~-~~~~~~~~~~~l~~~gV~~~~~-~v~~v~~~----~v~~--~~g-~~~~~ 324 (351)
. + ...+.+.+.+.+++.|++++.+ +|++++.+ .|++ .+| .++.+
T Consensus 117 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~a~~~gv~i~~~~~v~~l~~~~~~v~v~~~~~~G~~~~~a 196 (570)
T 3fmw_A 117 AKGLPFAGIFTQGLDFGLVDTRHPYTGLVPQSRTEALLAEHAREAGAEIPRGHEVTRLRQDAEAVEVTVAGPSGPYPVRA 196 (570)
T ss_dssp CSBCCBTTBCTTCCBGGGSCCSCCSBBCCCHHHHHHHHHHHHHHHTEECCBSCEEEECCBCSSCEEEEEEETTEEEEEEE
T ss_pred cCCceeCCcccccccccccCCCCCeeEEeCHHHHHHHHHHHHHhCCCEEEeCCEEEEEEEcCCeEEEEEEeCCCcEEEEe
Confidence 0 0 1234566677777789999999 49988653 3455 577 68999
Q ss_pred cEEEEecCCCCc
Q 018704 325 GLLVWSTGVGPS 336 (351)
Q Consensus 325 D~vi~a~G~~p~ 336 (351)
|.||.|.|.+..
T Consensus 197 ~~vV~ADG~~S~ 208 (570)
T 3fmw_A 197 RYGVGCDGGRST 208 (570)
T ss_dssp SEEEECSCSSCH
T ss_pred CEEEEcCCCCch
Confidence 999999998764
No 311
>2oln_A NIKD protein; flavoprotein, rossmann fold, oxidoreductase; HET: FAD; 1.15A {Streptomyces tendae} PDB: 2olo_A* 3hzl_A* 2q6u_A*
Probab=97.70 E-value=0.00018 Score=66.37 Aligned_cols=57 Identities=19% Similarity=0.205 Sum_probs=40.1
Q ss_pred HHHHHHHHhhhcCcEEEcCe-EEEEeC--CeE--EecCCcEEeccEEEEecCCCCccccccCC
Q 018704 286 LRHYATTQLSKSGVRLVRGI-VKDVDS--QKL--ILNDGTEVPYGLLVWSTGVGPSTLVKSLD 343 (351)
Q Consensus 286 ~~~~~~~~l~~~gV~~~~~~-v~~v~~--~~v--~~~~g~~~~~D~vi~a~G~~p~~~~~~~g 343 (351)
+...+.+.+++.|++++.++ |+++.. +++ .+.+| ++.+|.||+|+|.+...+++.+|
T Consensus 155 ~~~~l~~~a~~~Gv~i~~~~~V~~i~~~~~~v~v~t~~g-~i~a~~VV~A~G~~s~~l~~~~g 216 (397)
T 2oln_A 155 TLAALFTLAQAAGATLRAGETVTELVPDADGVSVTTDRG-TYRAGKVVLACGPYTNDLLEPLG 216 (397)
T ss_dssp HHHHHHHHHHHTTCEEEESCCEEEEEEETTEEEEEESSC-EEEEEEEEECCGGGHHHHHGGGT
T ss_pred HHHHHHHHHHHcCCEEECCCEEEEEEEcCCeEEEEECCC-EEEcCEEEEcCCcChHHHhhhcC
Confidence 33445566677899999984 888753 344 33444 79999999999987665555555
No 312
>3qj4_A Renalase; FAD/NAD(P)-binding rossmann fold superfamily, flavin contain oxidoreductase, monoamine oxidase, NAD, extracellular, oxidoreductase; HET: FAD; 2.50A {Homo sapiens}
Probab=97.70 E-value=9.6e-05 Score=66.85 Aligned_cols=37 Identities=19% Similarity=0.315 Sum_probs=29.3
Q ss_pred cCcEEEcCe-EEEEeC--C--eEEecCCcEEeccEEEEecCC
Q 018704 297 SGVRLVRGI-VKDVDS--Q--KLILNDGTEVPYGLLVWSTGV 333 (351)
Q Consensus 297 ~gV~~~~~~-v~~v~~--~--~v~~~~g~~~~~D~vi~a~G~ 333 (351)
.|+++++++ |++++. + .|.+.+|+++.+|.||+|++.
T Consensus 122 ~g~~i~~~~~V~~i~~~~~~~~v~~~~g~~~~ad~vV~A~p~ 163 (342)
T 3qj4_A 122 SGAEVYFRHRVTQINLRDDKWEVSKQTGSPEQFDLIVLTMPV 163 (342)
T ss_dssp HTCEEESSCCEEEEEECSSSEEEEESSSCCEEESEEEECSCH
T ss_pred cCCEEEeCCEEEEEEEcCCEEEEEECCCCEEEcCEEEECCCH
Confidence 389999995 988864 3 456678877899999999973
No 313
>2x8g_A Thioredoxin glutathione reductase; redox-active center, detoxification pathway, oxidoreductase, flavoprotein; HET: FAD PG4; 1.90A {Schistosoma mansoni} PDB: 2x8c_A* 2x8h_A* 2x99_A* 3h4k_A* 2v6o_A*
Probab=97.70 E-value=7.8e-05 Score=72.95 Aligned_cols=102 Identities=15% Similarity=0.155 Sum_probs=61.0
Q ss_pred CCcEEEECCchhHHHHHHhhhccCceEEEEcCCCccccchhhhhhhcccccccccccchhccchhhhcCCCeEEEEE-Ee
Q 018704 62 KPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRNHMVFTPLLASTCVGTLEFRSVAEPIARIQPAISREPGSYFFLS-HC 140 (351)
Q Consensus 62 ~~~VvIIG~G~aGl~aA~~L~~~g~~v~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~v 140 (351)
..+|+|||||+.|+.+|..|++.|.+|+++++...+. . +...+...........++.++.. .+
T Consensus 286 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~l~------~----------~d~~~~~~~~~~l~~~gv~i~~~~~v 349 (598)
T 2x8g_A 286 PGKTLVIGASYVALECAGFLASLGGDVTVMVRSILLR------G----------FDQQMAEKVGDYMENHGVKFAKLCVP 349 (598)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEEEESSCSST------T----------SCHHHHHHHHHHHHHTTCEEEETEEE
T ss_pred CCEEEEECCCHHHHHHHHHHHHcCCEEEEEECCcCcC------c----------CCHHHHHHHHHHHHhCCCEEEECCeE
Confidence 3589999999999999999999999999999862111 0 00111111111223346666543 34
Q ss_pred eeEeC---------CCCEEEEEe-ecCccccCCCceeEeeccEEEEecCCCcCCC
Q 018704 141 AGIDT---------DNHVVHCET-VTDELRTLEPWKFKISYDKLVIALGAEASTF 185 (351)
Q Consensus 141 ~~i~~---------~~~~v~~~~-~~~~~~~~~~~~~~~~~d~lviAtG~~p~~p 185 (351)
..+.. ....+.+.. ..+++ ...+.+|.||+|+|..|+..
T Consensus 350 ~~v~~~~~~~~~~~~~~~~~v~~~~~~g~------~~~~~~D~vi~a~G~~p~~~ 398 (598)
T 2x8g_A 350 DEIKQLKVVDTENNKPGLLLVKGHYTDGK------KFEEEFETVIFAVGREPQLS 398 (598)
T ss_dssp EEEEEEECCBTTTTBCCEEEEEEEETTSC------EEEEEESEEEECSCEEECGG
T ss_pred EEEEeccccccccCCCceEEEEEEeCCCc------EEeccCCEEEEEeCCccccC
Confidence 44421 113343321 23444 12345999999999987753
No 314
>3atr_A Conserved archaeal protein; saturating double bonds, archaeal membrane precursor, like 2 geranylgeranylglyceryl phosphate; HET: FDA; 1.80A {Sulfolobus acidocaldarius} PDB: 3atq_A*
Probab=97.70 E-value=7e-05 Score=70.63 Aligned_cols=91 Identities=16% Similarity=0.168 Sum_probs=66.8
Q ss_pred eEEEECCChHHHHHHHHHHHHHHHHHHhhhcCCCCccEEEEEeCCCCC------CC------------------------
Q 018704 232 HCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEIL------SS------------------------ 281 (351)
Q Consensus 232 ~v~VvGgG~~a~e~a~~l~~~~~~~~~~~~~~~~~~~~v~~~~~~~~l------~~------------------------ 281 (351)
+|+|||||.+|+-+|..|++.| .+|+++++.... ..
T Consensus 8 dVvIVGaG~aGl~aA~~La~~G--------------~~V~vlE~~~~~~~g~~~~g~~l~~~~l~~lg~~~~~~~~~~~~ 73 (453)
T 3atr_A 8 DVLIIGGGFAGSSAAYQLSRRG--------------LKILLVDSKPWNRIGDKPCGDAVSKAHFDKLGMPYPKGEELENK 73 (453)
T ss_dssp SEEEECCSHHHHHHHHHHSSSS--------------CCEEEECSSCGGGTTCSCCCCEEEHHHHHHTTCCCCCGGGEEEE
T ss_pred CEEEECcCHHHHHHHHHHHHCC--------------CCEEEEECCCCCCCCcccccccccHHHHHHhcCCCCchHHHHhh
Confidence 7999999999999999998765 677777764210 00
Q ss_pred -----------------------Cc-HHHHHHHHHHhhhcCcEEEcCe-EEEEeC--Ce---EEec---CCc--EEeccE
Q 018704 282 -----------------------FD-DRLRHYATTQLSKSGVRLVRGI-VKDVDS--QK---LILN---DGT--EVPYGL 326 (351)
Q Consensus 282 -----------------------~~-~~~~~~~~~~l~~~gV~~~~~~-v~~v~~--~~---v~~~---~g~--~~~~D~ 326 (351)
++ ..+.+.+.+.+.+.|++++.+. |+++.. ++ |++. +|+ ++.+|.
T Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~a~~~gv~i~~~~~v~~i~~~~~~v~gv~~~~~~~G~~~~~~ad~ 153 (453)
T 3atr_A 74 INGIKLYSPDMQTVWTVNGEGFELNAPLYNQRVLKEAQDRGVEIWDLTTAMKPIFEDGYVKGAVLFNRRTNEELTVYSKV 153 (453)
T ss_dssp EEEEEEECTTSSCEEEEEEEEEEECHHHHHHHHHHHHHHTTCEEESSEEEEEEEEETTEEEEEEEEETTTTEEEEEECSE
T ss_pred hcceEEECCCCceEEeECCCcEEEcHHHHHHHHHHHHHHcCCEEEeCcEEEEEEEECCEEEEEEEEEcCCCceEEEEcCE
Confidence 00 2355666777778899999995 888753 33 4454 676 789999
Q ss_pred EEEecCCCCc
Q 018704 327 LVWSTGVGPS 336 (351)
Q Consensus 327 vi~a~G~~p~ 336 (351)
||.|+|..+.
T Consensus 154 VV~AdG~~s~ 163 (453)
T 3atr_A 154 VVEATGYSRS 163 (453)
T ss_dssp EEECCGGGCT
T ss_pred EEECcCCchh
Confidence 9999998765
No 315
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=97.68 E-value=0.00028 Score=65.03 Aligned_cols=32 Identities=31% Similarity=0.446 Sum_probs=29.4
Q ss_pred eEEEECCChHHHHHHHHHHHHHHHHHHhhhcCCCCccEEEEEeCCC
Q 018704 232 HCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANE 277 (351)
Q Consensus 232 ~v~VvGgG~~a~e~a~~l~~~~~~~~~~~~~~~~~~~~v~~~~~~~ 277 (351)
+|+|||||++|+-+|..|.+.| .+|+++++..
T Consensus 3 ~V~IVGaGpaGl~~A~~L~~~G--------------~~v~v~Er~~ 34 (412)
T 4hb9_A 3 HVGIIGAGIGGTCLAHGLRKHG--------------IKVTIYERNS 34 (412)
T ss_dssp EEEEECCSHHHHHHHHHHHHTT--------------CEEEEECSSC
T ss_pred EEEEECcCHHHHHHHHHHHhCC--------------CCEEEEecCC
Confidence 8999999999999999999887 8999999853
No 316
>4gut_A Lysine-specific histone demethylase 1B; histone demethylase; HET: FAD PGE; 2.00A {Homo sapiens} PDB: 4gur_A* 4gus_A* 4guu_A* 4fwe_A* 4fwf_A* 4fwj_A* 4gu1_A*
Probab=97.67 E-value=2.5e-05 Score=78.41 Aligned_cols=37 Identities=16% Similarity=0.351 Sum_probs=34.0
Q ss_pred CCCcEEEECCchhHHHHHHhhhccCceEEEEcCCCcc
Q 018704 61 EKPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRNHM 97 (351)
Q Consensus 61 ~~~~VvIIG~G~aGl~aA~~L~~~g~~v~vie~~~~~ 97 (351)
..+||+|||||++||++|..|++.|++|+|+|+.+..
T Consensus 335 ~~~~v~viG~G~~Gl~aA~~l~~~g~~v~v~E~~~~~ 371 (776)
T 4gut_A 335 HNKSVIIIGAGPAGLAAARQLHNFGIKVTVLEAKDRI 371 (776)
T ss_dssp TSCEEEEECCSHHHHHHHHHHHHHTCEEEEECSSSSS
T ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCcEEEEecccce
Confidence 4589999999999999999999999999999987764
No 317
>1kdg_A CDH, cellobiose dehydrogenase; GMC oxidoreductase, PHBH fold, alpha/beta structure, rossman 6-hydroxylated FAD, oxidoreductase; HET: NAG MAN 6FA EMT; 1.50A {Phanerochaete chrysosporium} SCOP: c.3.1.2 d.16.1.1 PDB: 1naa_A*
Probab=97.66 E-value=2.5e-05 Score=75.60 Aligned_cols=37 Identities=11% Similarity=0.132 Sum_probs=33.5
Q ss_pred CCCCcEEEECCchhHHHHHHhhhccCceEEEEcCCCc
Q 018704 60 NEKPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRNH 96 (351)
Q Consensus 60 ~~~~~VvIIG~G~aGl~aA~~L~~~g~~v~vie~~~~ 96 (351)
+..+|+||||||++|+.+|.+|++.|++|+|+|+...
T Consensus 5 ~~~~D~iIvG~G~aG~~~A~~L~~~g~~VlvlE~g~~ 41 (546)
T 1kdg_A 5 ATPYDYIIVGAGPGGIIAADRLSEAGKKVLLLERGGP 41 (546)
T ss_dssp -CCEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSCC
T ss_pred CCceeEEEECcCHHHHHHHHHHHhCCCeEEEEeCCCC
Confidence 3458999999999999999999999999999998764
No 318
>1jnr_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 1.60A {Archaeoglobus fulgidus dsm 4304} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1jnz_A* 2fjb_A* 2fja_A* 2fjd_A* 2fje_A*
Probab=97.65 E-value=2.9e-05 Score=76.57 Aligned_cols=36 Identities=17% Similarity=0.353 Sum_probs=32.5
Q ss_pred CCCcEEEECCchhHHHHHHhhh---c-cCceEEEEcCCCc
Q 018704 61 EKPRVVVLGSGWAGCRLMKGID---T-SLYDVVCVSPRNH 96 (351)
Q Consensus 61 ~~~~VvIIG~G~aGl~aA~~L~---~-~g~~v~vie~~~~ 96 (351)
..+||||||||+|||+||+.|+ + .|.+|+|||+...
T Consensus 21 ~~~DVvVIG~G~AGl~AAl~aa~~~~~~G~~V~vlEK~~~ 60 (643)
T 1jnr_A 21 VETDILIIGGGFSGCGAAYEAAYWAKLGGLKVTLVEKAAV 60 (643)
T ss_dssp EECSEEEECCSHHHHHHHHHHHHHHTTTTCCEEEECSSCT
T ss_pred ccCCEEEECcCHHHHHHHHHHhhhhhhCCCeEEEEeCcCC
Confidence 3479999999999999999999 6 8999999998763
No 319
>2gmh_A Electron transfer flavoprotein-ubiquinone oxidoreductase; HET: BHG FAD UQ5; 2.50A {Sus scrofa} SCOP: c.3.1.2 d.16.1.8 d.58.1.6 PDB: 2gmj_A*
Probab=97.65 E-value=0.00028 Score=68.75 Aligned_cols=61 Identities=23% Similarity=0.338 Sum_probs=43.3
Q ss_pred HHHHHHHHHhhhcCcEEEcCe-EEEEeC--C----eEEec------CC---------cEEeccEEEEecCCCCc---ccc
Q 018704 285 RLRHYATTQLSKSGVRLVRGI-VKDVDS--Q----KLILN------DG---------TEVPYGLLVWSTGVGPS---TLV 339 (351)
Q Consensus 285 ~~~~~~~~~l~~~gV~~~~~~-v~~v~~--~----~v~~~------~g---------~~~~~D~vi~a~G~~p~---~~~ 339 (351)
.+.+.+.+.+++.||+++.+. |+++.. + +|.+. +| .++.+|.||.|.|.... .++
T Consensus 145 ~l~~~L~~~a~~~Gv~i~~g~~v~~l~~~~~g~V~gV~~~~~g~~~~G~~~~~~~~g~~i~Ad~VV~AdG~~S~vr~~l~ 224 (584)
T 2gmh_A 145 HLVSWMGEQAEALGVEVYPGYAAAEILFHEDGSVKGIATNDVGIQKDGAPKTTFERGLELHAKVTIFAEGCHGHLAKQLY 224 (584)
T ss_dssp HHHHHHHHHHHHTTCEEETTCCEEEEEECTTSSEEEEEECCEEECTTSCEEEEEECCCEEECSEEEECCCTTCHHHHHHH
T ss_pred HHHHHHHHHHHHcCCEEEcCCEEEEEEEcCCCCEEEEEeCCccccCCCCcccccCCceEEECCEEEEeeCCCchHHHHHH
Confidence 455667777888899999995 888752 2 25554 33 67999999999999875 344
Q ss_pred ccCCCC
Q 018704 340 KSLDLP 345 (351)
Q Consensus 340 ~~~gl~ 345 (351)
..+|+.
T Consensus 225 ~~~gl~ 230 (584)
T 2gmh_A 225 KKFDLR 230 (584)
T ss_dssp HHTTTT
T ss_pred HHhCCC
Confidence 444543
No 320
>3gyx_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 3.20A {Desulfovibrio gigas}
Probab=97.64 E-value=2.6e-05 Score=76.92 Aligned_cols=35 Identities=11% Similarity=0.180 Sum_probs=32.0
Q ss_pred CCCcEEEECCchhHHHHHHhhhcc------CceEEEEcCCC
Q 018704 61 EKPRVVVLGSGWAGCRLMKGIDTS------LYDVVCVSPRN 95 (351)
Q Consensus 61 ~~~~VvIIG~G~aGl~aA~~L~~~------g~~v~vie~~~ 95 (351)
..+||||||||+|||+||+.|++. |.+|+|||+..
T Consensus 21 ~~~DVvVVG~G~AGL~AAl~aa~~~~~~~pG~~V~vleK~~ 61 (662)
T 3gyx_A 21 HSVDLLMVGGGMGNCGAAFEAVRWADKYAPEAKILLVDKAS 61 (662)
T ss_dssp EECSEEEECCSHHHHHHHHHHHHHHHHHCTTCCEEEECSSC
T ss_pred EEcCEEEECCCHHHHHHHHHHHhhccccCCCCcEEEEEecC
Confidence 358999999999999999999997 99999999864
No 321
>1b37_A Protein (polyamine oxidase); flavin-dependent amine oxidase, oxidoreductase; HET: NAG FCA MAN FAD; 1.90A {Zea mays} SCOP: c.3.1.2 d.16.1.5 PDB: 1b5q_A* 1h81_A* 1h82_A* 1h83_A* 1h84_A* 1h86_A* 3kpf_A* 3ku9_A* 3l1r_A*
Probab=97.63 E-value=3.4e-05 Score=73.19 Aligned_cols=36 Identities=28% Similarity=0.576 Sum_probs=32.8
Q ss_pred CCcEEEECCchhHHHHHHhhhccCc-eEEEEcCCCcc
Q 018704 62 KPRVVVLGSGWAGCRLMKGIDTSLY-DVVCVSPRNHM 97 (351)
Q Consensus 62 ~~~VvIIG~G~aGl~aA~~L~~~g~-~v~vie~~~~~ 97 (351)
.+||+|||||++||++|+.|++.|+ +|+|+|+++..
T Consensus 4 ~~~~~iiG~G~~g~~~a~~l~~~g~~~v~~~e~~~~~ 40 (472)
T 1b37_A 4 GPRVIVVGAGMSGISAAKRLSEAGITDLLILEATDHI 40 (472)
T ss_dssp -CCEEEECCBHHHHHHHHHHHHTTCCCEEEECSSSSS
T ss_pred CCeEEEECCCHHHHHHHHHHHhcCCCceEEEeCCCCC
Confidence 4799999999999999999999999 89999998764
No 322
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=97.61 E-value=8.2e-05 Score=73.81 Aligned_cols=83 Identities=22% Similarity=0.339 Sum_probs=62.2
Q ss_pred ccCeEEEECCChHHHHHHHHHHHHHHHHHHhhhcCCCCccEEEEEeCCCCC----------CCCc--HHHHHHHHHHhhh
Q 018704 229 RLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEIL----------SSFD--DRLRHYATTQLSK 296 (351)
Q Consensus 229 ~~~~v~VvGgG~~a~e~a~~l~~~~~~~~~~~~~~~~~~~~v~~~~~~~~l----------~~~~--~~~~~~~~~~l~~ 296 (351)
..++|+|||||+.|+.+|..|.+.+ .+|+++++.+.+ +... .+....+.+.+++
T Consensus 372 ~~~~vvIIGgG~AGl~aA~~l~~~g--------------~~V~lie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~ 437 (671)
T 1ps9_A 372 QKKNLAVVGAGPAGLAFAINAAARG--------------HQVTLFDAHSEIGGQFNIAKQIPGKEEFYETLRYYRRMIEV 437 (671)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHTTT--------------CEEEEEESSSSSCTTHHHHTTSTTCTTHHHHHHHHHHHHHH
T ss_pred CCCeEEEECCCHHHHHHHHHHHhCC--------------CeEEEEeCCCCCCCeeeccccCCCHHHHHHHHHHHHHHHHH
Confidence 3469999999999999999998766 899999996422 1111 2334456677788
Q ss_pred cCcEEEcCe-EEEEeCCeEEecCCcEE-eccEEEEecCCCCc
Q 018704 297 SGVRLVRGI-VKDVDSQKLILNDGTEV-PYGLLVWSTGVGPS 336 (351)
Q Consensus 297 ~gV~~~~~~-v~~v~~~~v~~~~g~~~-~~D~vi~a~G~~p~ 336 (351)
.||+++.++ |.. ..+ .+|.||+|||.+|.
T Consensus 438 ~gv~~~~~~~v~~-----------~~~~~~d~lviAtG~~p~ 468 (671)
T 1ps9_A 438 TGVTLKLNHTVTA-----------DQLQAFDETILASGIVPR 468 (671)
T ss_dssp HTCEEEESCCCCS-----------SSSCCSSEEEECCCEEEC
T ss_pred cCCEEEeCcEecH-----------HHhhcCCEEEEccCCCcC
Confidence 899999985 321 124 89999999999877
No 323
>3ihg_A RDME; flavoenzyme, anthracycline, polyketide biosynthesis, merohedral twinning, enzyme mechanism, hydroxylase, flavoprotein; HET: FAD VAK; 2.49A {Streptomyces purpurascens}
Probab=97.60 E-value=0.00023 Score=68.63 Aligned_cols=52 Identities=19% Similarity=0.162 Sum_probs=39.3
Q ss_pred HHHHHHHHHhhhcCcEEEcCe-EEEEeC--C----e--EEecCC---cEEeccEEEEecCCCCc
Q 018704 285 RLRHYATTQLSKSGVRLVRGI-VKDVDS--Q----K--LILNDG---TEVPYGLLVWSTGVGPS 336 (351)
Q Consensus 285 ~~~~~~~~~l~~~gV~~~~~~-v~~v~~--~----~--v~~~~g---~~~~~D~vi~a~G~~p~ 336 (351)
.+.+.+.+.+++.|++++.+. |++++. + + +++.++ .++.||.||.|.|....
T Consensus 121 ~l~~~L~~~a~~~gv~i~~~~~v~~i~~~~~~~~~~v~v~~~~~~~~~~i~a~~vV~AdG~~S~ 184 (535)
T 3ihg_A 121 KLEPILLAQARKHGGAIRFGTRLLSFRQHDDDAGAGVTARLAGPDGEYDLRAGYLVGADGNRSL 184 (535)
T ss_dssp HHHHHHHHHHHHTTCEEESSCEEEEEEEECGGGCSEEEEEEEETTEEEEEEEEEEEECCCTTCH
T ss_pred HHHHHHHHHHHhCCCEEEeCCEEEEEEECCCCccccEEEEEEcCCCeEEEEeCEEEECCCCcch
Confidence 455666777788899999994 888753 3 4 444555 67999999999998764
No 324
>3e1t_A Halogenase; flavoprotein; HET: FAD; 2.05A {Chondromyces crocatus}
Probab=97.60 E-value=0.00031 Score=67.34 Aligned_cols=51 Identities=16% Similarity=0.147 Sum_probs=38.1
Q ss_pred HHHHHHHHhhhcCcEEEcC-eEEEEeC--C---eEEe--cCCc--EEeccEEEEecCCCCc
Q 018704 286 LRHYATTQLSKSGVRLVRG-IVKDVDS--Q---KLIL--NDGT--EVPYGLLVWSTGVGPS 336 (351)
Q Consensus 286 ~~~~~~~~l~~~gV~~~~~-~v~~v~~--~---~v~~--~~g~--~~~~D~vi~a~G~~p~ 336 (351)
+.+.+.+.+++.||+++.+ +|+++.. + +|.+ .+|+ ++.+|.||.|+|....
T Consensus 113 l~~~L~~~a~~~Gv~i~~~~~V~~v~~~~~~v~gv~~~~~dG~~~~i~ad~VI~AdG~~S~ 173 (512)
T 3e1t_A 113 FDDMLLRNSERKGVDVRERHEVIDVLFEGERAVGVRYRNTEGVELMAHARFIVDASGNRTR 173 (512)
T ss_dssp HHHHHHHHHHHTTCEEESSCEEEEEEEETTEEEEEEEECSSSCEEEEEEEEEEECCCTTCS
T ss_pred HHHHHHHHHHhCCCEEEcCCEEEEEEEECCEEEEEEEEeCCCCEEEEEcCEEEECCCcchH
Confidence 4455666777889999999 4888754 3 2444 4574 7999999999998765
No 325
>2qa2_A CABE, polyketide oxygenase CABE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 2.70A {Streptomyces}
Probab=97.58 E-value=0.00053 Score=65.46 Aligned_cols=93 Identities=19% Similarity=0.259 Sum_probs=67.1
Q ss_pred cCeEEEECCChHHHHHHHHHHHHHHHHHHhhhcCCCCccEEEEEeCCCCCC-----------------------------
Q 018704 230 LLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEILS----------------------------- 280 (351)
Q Consensus 230 ~~~v~VvGgG~~a~e~a~~l~~~~~~~~~~~~~~~~~~~~v~~~~~~~~l~----------------------------- 280 (351)
..+|+|||||++|+-+|..|++.| .+|+++++.....
T Consensus 12 ~~dVlIVGaGpaGl~~A~~La~~G--------------~~v~vlE~~~~~~~~~r~~~l~~~~~~~l~~lGl~~~~~~~~ 77 (499)
T 2qa2_A 12 DASVIVVGAGPAGLMLAGELRLGG--------------VDVMVLEQLPQRTGESRGLGFTARTMEVFDQRGILPAFGPVE 77 (499)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTT--------------CCEEEEESCSSCCCCCCSEEECHHHHHHHHHTTCGGGGCSCC
T ss_pred CCCEEEECcCHHHHHHHHHHHHCC--------------CCEEEEECCCCCCCCCceeEECHHHHHHHHHCCCHHHHHhcc
Confidence 348999999999999999999865 5666665531000
Q ss_pred -------------------C------C-cHHHHHHHHHHhhhcCcEEEcC-eEEEEeC--C--eEEecCCc---EEeccE
Q 018704 281 -------------------S------F-DDRLRHYATTQLSKSGVRLVRG-IVKDVDS--Q--KLILNDGT---EVPYGL 326 (351)
Q Consensus 281 -------------------~------~-~~~~~~~~~~~l~~~gV~~~~~-~v~~v~~--~--~v~~~~g~---~~~~D~ 326 (351)
. + ...+.+.+.+.+++.|++++.+ +|++++. + .+++.++. ++.+|.
T Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~~~~~gv~v~~~~~v~~i~~~~~~v~v~~~~~~g~~~~~a~~ 157 (499)
T 2qa2_A 78 TSTQGHFGGRPVDFGVLEGAHYGVKAVPQSTTESVLEEWALGRGAELLRGHTVRALTDEGDHVVVEVEGPDGPRSLTTRY 157 (499)
T ss_dssp EESEEEETTEEEEGGGSTTCCCEEEEEEHHHHHHHHHHHHHHTTCEEEESCEEEEEEECSSCEEEEEECSSCEEEEEEEE
T ss_pred ccccceecceecccccCCCCCCceEecCHHHHHHHHHHHHHhCCCEEEcCCEEEEEEEeCCEEEEEEEcCCCcEEEEeCE
Confidence 0 0 1245566667777889999999 4888864 3 35556664 799999
Q ss_pred EEEecCCCCc
Q 018704 327 LVWSTGVGPS 336 (351)
Q Consensus 327 vi~a~G~~p~ 336 (351)
||.|.|....
T Consensus 158 vVgADG~~S~ 167 (499)
T 2qa2_A 158 VVGCDGGRST 167 (499)
T ss_dssp EEECCCTTCH
T ss_pred EEEccCcccH
Confidence 9999998765
No 326
>3t37_A Probable dehydrogenase; BET alpha beta fold, ADP binding, oxidoreductase; HET: FAD; 2.19A {Mesorhizobium loti}
Probab=97.57 E-value=5.9e-05 Score=72.49 Aligned_cols=35 Identities=20% Similarity=0.315 Sum_probs=32.4
Q ss_pred CCcEEEECCchhHHHHHHhhhc-cCceEEEEcCCCc
Q 018704 62 KPRVVVLGSGWAGCRLMKGIDT-SLYDVVCVSPRNH 96 (351)
Q Consensus 62 ~~~VvIIG~G~aGl~aA~~L~~-~g~~v~vie~~~~ 96 (351)
.+|+||||||+||+.+|.+|++ .+++|+|+|+.+.
T Consensus 17 ~yD~IIVGsG~aG~v~A~rLse~~~~~VLvLEaG~~ 52 (526)
T 3t37_A 17 NCDIVIVGGGSAGSLLAARLSEDPDSRVLLIEAGEE 52 (526)
T ss_dssp CEEEEEECCSHHHHHHHHHHTTSTTSCEEEECSSBC
T ss_pred CeeEEEECccHHHHHHHHHHHhCCCCeEEEEcCCCC
Confidence 5899999999999999999998 7899999998765
No 327
>2qa1_A PGAE, polyketide oxygenase PGAE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 1.80A {Streptomyces}
Probab=97.49 E-value=0.00059 Score=65.18 Aligned_cols=93 Identities=20% Similarity=0.213 Sum_probs=66.6
Q ss_pred cCeEEEECCChHHHHHHHHHHHHHHHHHHhhhcCCCCccEEEEEeCCCCCC-----------------------------
Q 018704 230 LLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEILS----------------------------- 280 (351)
Q Consensus 230 ~~~v~VvGgG~~a~e~a~~l~~~~~~~~~~~~~~~~~~~~v~~~~~~~~l~----------------------------- 280 (351)
..+|+|||||++|+-+|..|++.| .+|+++++.....
T Consensus 11 ~~dVlIVGaGpaGl~~A~~La~~G--------------~~v~vlE~~~~~~~~~r~~~l~~~~~~~l~~lGl~~~~~~~~ 76 (500)
T 2qa1_A 11 DAAVIVVGAGPAGMMLAGELRLAG--------------VEVVVLERLVERTGESRGLGFTARTMEVFDQRGILPRFGEVE 76 (500)
T ss_dssp BCSEEEECCSHHHHHHHHHHHHTT--------------CCEEEEESCCC-CCCCCSEEECHHHHHHHHTTTCGGGGCSCC
T ss_pred CCCEEEECcCHHHHHHHHHHHHCC--------------CCEEEEeCCCCCCCCCCcceECHHHHHHHHHCCCHHHHHhcc
Confidence 348999999999999999999865 5666666531000
Q ss_pred -------------------C------Cc-HHHHHHHHHHhhhcCcEEEcC-eEEEEeC--Ce--EEecCCc---EEeccE
Q 018704 281 -------------------S------FD-DRLRHYATTQLSKSGVRLVRG-IVKDVDS--QK--LILNDGT---EVPYGL 326 (351)
Q Consensus 281 -------------------~------~~-~~~~~~~~~~l~~~gV~~~~~-~v~~v~~--~~--v~~~~g~---~~~~D~ 326 (351)
. ++ ..+.+.+.+.+++.|++++.+ +|++++. ++ +++.++. ++.+|.
T Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~~~~~gv~v~~~~~v~~i~~~~~~v~v~~~~~~g~~~~~a~~ 156 (500)
T 2qa1_A 77 TSTQGHFGGLPIDFGVLEGAWQAAKTVPQSVTETHLEQWATGLGADIRRGHEVLSLTDDGAGVTVEVRGPEGKHTLRAAY 156 (500)
T ss_dssp BCCEEEETTEEEEGGGSTTGGGCEEEEEHHHHHHHHHHHHHHTTCEEEETCEEEEEEEETTEEEEEEEETTEEEEEEESE
T ss_pred ccccccccceecccccCCCCCCceeecCHHHHHHHHHHHHHHCCCEEECCcEEEEEEEcCCeEEEEEEcCCCCEEEEeCE
Confidence 0 00 234556667777889999999 4888853 44 4455654 799999
Q ss_pred EEEecCCCCc
Q 018704 327 LVWSTGVGPS 336 (351)
Q Consensus 327 vi~a~G~~p~ 336 (351)
||.|.|....
T Consensus 157 vVgADG~~S~ 166 (500)
T 2qa1_A 157 LVGCDGGRSS 166 (500)
T ss_dssp EEECCCTTCH
T ss_pred EEECCCcchH
Confidence 9999998765
No 328
>3ayj_A Pro-enzyme of L-phenylalanine oxidase; amino acid oxidase, flavoenzyme, L- binding, oxidoreductase; HET: FAD PHE; 1.10A {Pseudomonas} PDB: 2yr4_A* 2yr6_A* 3ayi_A* 2yr5_A* 3ayl_A*
Probab=97.46 E-value=5.1e-05 Score=74.99 Aligned_cols=36 Identities=17% Similarity=0.265 Sum_probs=33.3
Q ss_pred CCcEEEECCchhHHHHHHhhhccC--------ceEEEEcCCC-cc
Q 018704 62 KPRVVVLGSGWAGCRLMKGIDTSL--------YDVVCVSPRN-HM 97 (351)
Q Consensus 62 ~~~VvIIG~G~aGl~aA~~L~~~g--------~~v~vie~~~-~~ 97 (351)
.++|+|||||++||+||+.|++.| ++|+|+|+++ +.
T Consensus 56 ~~~v~IiGaGiaGL~aA~~L~~~g~~~~~~~~~~V~v~E~~~~r~ 100 (721)
T 3ayj_A 56 NYRIAIVGGGAGGIAALYELGRLAATLPAGSGIDVQIYEADPDSF 100 (721)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHHHTTSCTTCEEEEEEECCCTTBG
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCcccccCCCceEEEEeccCccc
Confidence 468999999999999999999988 9999999988 65
No 329
>3c96_A Flavin-containing monooxygenase; FAD, oxidoreductase, PF01266, NESG, PAR240, structural genomics, PSI-2; HET: FAD; 1.90A {Pseudomonas aeruginosa PAO1} SCOP: c.3.1.2 d.16.1.2 PDB: 2rgj_A*
Probab=97.42 E-value=0.0008 Score=62.38 Aligned_cols=91 Identities=21% Similarity=0.329 Sum_probs=64.1
Q ss_pred eEEEECCChHHHHHHHHHHHHHHHHHHhhhcCCCCccE-EEEEeCCCCCCC------Cc---------------------
Q 018704 232 HCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIH-VTLIEANEILSS------FD--------------------- 283 (351)
Q Consensus 232 ~v~VvGgG~~a~e~a~~l~~~~~~~~~~~~~~~~~~~~-v~~~~~~~~l~~------~~--------------------- 283 (351)
+|+|||||.+|+-+|..|++.| .+ |+++++...... +.
T Consensus 6 dVvIVGaG~aGl~~A~~L~~~G--------------~~~v~v~E~~~~~~~~g~g~~l~~~~~~~l~~lg~~~~l~~~~~ 71 (410)
T 3c96_A 6 DILIAGAGIGGLSCALALHQAG--------------IGKVTLLESSSEIRPLGVGINIQPAAVEALAELGLGPALAATAI 71 (410)
T ss_dssp EEEEECCSHHHHHHHHHHHHTT--------------CSEEEEEESSSSCCCCSCEEEECHHHHHHHHHTTCHHHHHHHSE
T ss_pred eEEEECCCHHHHHHHHHHHhCC--------------CCeEEEEECCCCcccceeEEEEChHHHHHHHHCCChHHHHhhCC
Confidence 8999999999999999999876 77 888887532100 00
Q ss_pred -----------------------------------HHHHHHHHHHhhh-cC-cEEEcCe-EEEEeC-C--eEEecC---C
Q 018704 284 -----------------------------------DRLRHYATTQLSK-SG-VRLVRGI-VKDVDS-Q--KLILND---G 319 (351)
Q Consensus 284 -----------------------------------~~~~~~~~~~l~~-~g-V~~~~~~-v~~v~~-~--~v~~~~---g 319 (351)
..+.+.+.+.+.+ .| ++++.+. |++++. + .+.+.+ |
T Consensus 72 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~~g~~~v~~~~~v~~i~~~~~v~v~~~~~~~g 151 (410)
T 3c96_A 72 PTHELRYIDQSGATVWSEPRGVEAGNAYPQYSIHRGELQMILLAAVRERLGQQAVRTGLGVERIEERDGRVLIGARDGHG 151 (410)
T ss_dssp EECEEEEECTTSCEEEEEECGGGGTCSSCEEEEEHHHHHHHHHHHHHHHHCTTSEEESEEEEEEEEETTEEEEEEEETTS
T ss_pred CcceEEEEcCCCCEEeeccCCccccCCCCeeeeeHHHHHHHHHHHHHhhCCCcEEEECCEEEEEecCCccEEEEecCCCC
Confidence 1234455555655 35 6899994 877752 3 355554 7
Q ss_pred --cEEeccEEEEecCCCCc
Q 018704 320 --TEVPYGLLVWSTGVGPS 336 (351)
Q Consensus 320 --~~~~~D~vi~a~G~~p~ 336 (351)
.++.+|.||.|.|....
T Consensus 152 ~~~~~~ad~vV~AdG~~S~ 170 (410)
T 3c96_A 152 KPQALGADVLVGADGIHSA 170 (410)
T ss_dssp CEEEEEESEEEECCCTTCH
T ss_pred CceEEecCEEEECCCccch
Confidence 57899999999998765
No 330
>2gag_A Heterotetrameric sarcosine oxidase alpha-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_A* 1x31_A* 1vrq_A* 3ad7_A* 3ad8_A* 3ad9_A* 3ada_A*
Probab=97.41 E-value=0.0004 Score=71.68 Aligned_cols=91 Identities=19% Similarity=0.181 Sum_probs=64.3
Q ss_pred eEEEECCChHHHHHHHHHHHHHHHHHHhhhcCCCCccEEEEEeCCCCCC----C-----C----cHHHHHHHHHHhhhc-
Q 018704 232 HCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEILS----S-----F----DDRLRHYATTQLSKS- 297 (351)
Q Consensus 232 ~v~VvGgG~~a~e~a~~l~~~~~~~~~~~~~~~~~~~~v~~~~~~~~l~----~-----~----~~~~~~~~~~~l~~~- 297 (351)
+|+|||||+.|+.+|..+.+.+ .+|+++++...+. . + ..+....+.+.+.+.
T Consensus 130 dVvVIGaGpAGl~AA~~la~~G--------------~~V~lie~~~~~GG~~~~~~k~~i~~~~~~~~~~~~~~~l~~~~ 195 (965)
T 2gag_A 130 DVLVVGAGPAGLAAAREASRSG--------------ARVMLLDERAEAGGTLLDTAGEQIDGMDSSAWIEQVTSELAEAE 195 (965)
T ss_dssp EEEEECCSHHHHHHHHHHHHTT--------------CCEEEECSSSSSSGGGGGSSCCEETTEEHHHHHHHHHHHHHHST
T ss_pred CEEEECCCHHHHHHHHHHHhCC--------------CcEEEEeCCCCCCceeccCCccccCCCCHHHHHHHHHHHHhhcC
Confidence 8999999999999999999876 8999999864221 0 1 123334444556664
Q ss_pred CcEEEcCe-EEEEeCCe-E----------Ee--------cCCcEEeccEEEEecCCCCc
Q 018704 298 GVRLVRGI-VKDVDSQK-L----------IL--------NDGTEVPYGLLVWSTGVGPS 336 (351)
Q Consensus 298 gV~~~~~~-v~~v~~~~-v----------~~--------~~g~~~~~D~vi~a~G~~p~ 336 (351)
+|+++.++ |.++.... + .+ .++.++.+|.||+|||..|.
T Consensus 196 ~v~~~~~~~V~~i~~~~~~~~v~~~~~~~~v~~~~~~~~~~~~~i~~d~lVlATGs~p~ 254 (965)
T 2gag_A 196 ETTHLQRTTVFGSYDANYLIAAQRRTVHLDGPSGPGVSRERIWHIRAKQVVLATGAHER 254 (965)
T ss_dssp TEEEESSEEEEEEETTTEEEEEEECSTTCSSCCCTTCCSEEEEEEEEEEEEECCCEEEC
T ss_pred CcEEEeCCEEEeeecCCceeeeEeecccccccccccCCCCceEEEECCEEEECCCCccC
Confidence 99999994 88776431 1 11 11236899999999998776
No 331
>3jsk_A Cypbp37 protein; octameric thiazole synthase, biosynthetic protein; HET: AHZ; 2.70A {Neurospora crassa}
Probab=97.41 E-value=0.0012 Score=59.52 Aligned_cols=92 Identities=20% Similarity=0.307 Sum_probs=64.1
Q ss_pred CeEEEECCChHHHHHHHHHHHH--HHHHHHhhhcCCCCccEEEEEeCCCCCC----------------------------
Q 018704 231 LHCVVVGGGPTGVEFSGELSDF--IMRDVRQRYSHVKDYIHVTLIEANEILS---------------------------- 280 (351)
Q Consensus 231 ~~v~VvGgG~~a~e~a~~l~~~--~~~~~~~~~~~~~~~~~v~~~~~~~~l~---------------------------- 280 (351)
..|+|||||.+|+-+|..|++. + .+|.++++.....
T Consensus 80 ~DVvIVGgG~AGL~aA~~La~~~~G--------------~~V~LiEk~~~~GGg~~~~g~~~~~~~~~~~~~~~L~~~Gv 145 (344)
T 3jsk_A 80 TDIVIVGAGSCGLSAAYVLSTLRPD--------------LRITIVEAGVAPGGGAWLGGQLFSAMVMRKPADVFLDEVGV 145 (344)
T ss_dssp CSEEEECCSHHHHHHHHHHHHHCTT--------------SCEEEEESSSSCCTTTTCCBTTCCCEEEETTTHHHHHHHTC
T ss_pred CCEEEECccHHHHHHHHHHHhcCCC--------------CEEEEEeCCCccCCccccCCccchhhhcchHHHHHHHHcCC
Confidence 3899999999999999999886 5 8899999863211
Q ss_pred ------C-----CcHHHHHHHHHHhhh-cCcEEEcCe-EEEEeC-------------------C-----eEEec------
Q 018704 281 ------S-----FDDRLRHYATTQLSK-SGVRLVRGI-VKDVDS-------------------Q-----KLILN------ 317 (351)
Q Consensus 281 ------~-----~~~~~~~~~~~~l~~-~gV~~~~~~-v~~v~~-------------------~-----~v~~~------ 317 (351)
. ...++.+.+.+.+.+ .|++++.+. +.++.. + +|++.
T Consensus 146 ~~~~~G~~~~~~~~~d~~~~L~~~a~~~~gV~i~~~~~V~dLi~~~d~~~~~~~~~~g~~~~~g~~rV~GVv~~~~~v~~ 225 (344)
T 3jsk_A 146 PYEDEGDYVVVKHAALFTSTVLSKVLQRPNVKLFNATTVEDLITRKHHAESSSSSDDGEAEDEAKVRIAGVVTNWTLVSM 225 (344)
T ss_dssp CCEECSSEEEESCHHHHHHHHHHHHHTCTTEEEEETEEEEEEEEEEC----------------CCEEEEEEEEEEHHHHT
T ss_pred cccccCCeEEEecHHHHHHHHHHHHHhCCCCEEEeCCEEEEEEecCCcccccccccccccccCCCceEeEEEeeeeeeec
Confidence 0 012334555666666 599999994 766631 1 23321
Q ss_pred --------CCcEEeccEEEEecCCCCc
Q 018704 318 --------DGTEVPYGLLVWSTGVGPS 336 (351)
Q Consensus 318 --------~g~~~~~D~vi~a~G~~p~ 336 (351)
++.++.++.||.|||....
T Consensus 226 ~g~~~~~~d~~~i~Ak~VV~ATG~~s~ 252 (344)
T 3jsk_A 226 HHDDQSAMDPNTINAPVIISTTGHDGP 252 (344)
T ss_dssp TSSSSSCCBCEEEECSEEEECCCSSSS
T ss_pred cCCcccccCceEEEcCEEEECCCCCch
Confidence 2346899999999998755
No 332
>2gjc_A Thiazole biosynthetic enzyme, mitochondrial; glutathione reductase type II family, thiazole synthase, mitochondria DNA repair; HET: AHZ; 1.82A {Saccharomyces cerevisiae} PDB: 3fpz_A*
Probab=97.41 E-value=0.0014 Score=58.69 Aligned_cols=91 Identities=18% Similarity=0.320 Sum_probs=63.0
Q ss_pred eEEEECCChHHHHHHHHHHHH--HHHHHHhhhcCCCCccEEEEEeCCCCCC-C---------------------------
Q 018704 232 HCVVVGGGPTGVEFSGELSDF--IMRDVRQRYSHVKDYIHVTLIEANEILS-S--------------------------- 281 (351)
Q Consensus 232 ~v~VvGgG~~a~e~a~~l~~~--~~~~~~~~~~~~~~~~~v~~~~~~~~l~-~--------------------------- 281 (351)
+|+|||||.+|+-+|..|++. + .+|+++++..... .
T Consensus 67 dv~IiG~G~aGl~aA~~la~~~~g--------------~~V~v~e~~~~~ggg~~~~g~~~~~~~~~~~~~~~L~~~Gv~ 132 (326)
T 2gjc_A 67 DVIIVGAGSSGLSAAYVIAKNRPD--------------LKVCIIESSVAPGGGSWLGGQLFSAMVMRKPAHLFLQELEIP 132 (326)
T ss_dssp SEEEECCSHHHHHHHHHHHHHCTT--------------SCEEEECSSSSCCTTTTCCGGGCCCEEEETTTHHHHHHTTCC
T ss_pred CEEEECccHHHHHHHHHHHhcCCC--------------CeEEEEecCccccccccccCcccchhhhhhHHHHHHHhhCcc
Confidence 799999999999999999886 5 8899999853211 0
Q ss_pred -----------CcHHHHHHHHHHhhh-cCcEEEcCe-EEEEeC----C-------eEEec--------------CCcEEe
Q 018704 282 -----------FDDRLRHYATTQLSK-SGVRLVRGI-VKDVDS----Q-------KLILN--------------DGTEVP 323 (351)
Q Consensus 282 -----------~~~~~~~~~~~~l~~-~gV~~~~~~-v~~v~~----~-------~v~~~--------------~g~~~~ 323 (351)
....+...+.+.+.+ .||+++.+. |.++.. + +|++. ++.++.
T Consensus 133 ~~~~g~~~~~~~~~~~~~~L~~~a~~~~GV~i~~~~~V~~Ll~~~~~~~g~~rV~GVvv~~~~v~~~g~~~~~~d~~~I~ 212 (326)
T 2gjc_A 133 YEDEGDYVVVKHAALFISTVLSKVLQLPNVKLFNATCVEDLVTRPPTEKGEVTVAGVVTNWTLVTQAHGTQCCMDPNVIE 212 (326)
T ss_dssp CEECSSEEEESCHHHHHHHHHHHHHTSTTEEEETTEEEEEEEECCCC-----CEEEEEEEEHHHHTC---CCCCCCEEEE
T ss_pred cccCCCeEEEcchHHHHHHHHHHHHHhcCcEEEecceeeeeeecccccCCCcEEEEEEecceeecccccceeccCceEEE
Confidence 012334455556666 499999984 877632 1 23331 345689
Q ss_pred c---------------cEEEEecCCCCc
Q 018704 324 Y---------------GLLVWSTGVGPS 336 (351)
Q Consensus 324 ~---------------D~vi~a~G~~p~ 336 (351)
| |.||.|||+...
T Consensus 213 A~G~~~~~~~~~~~~~~~VV~ATG~~~~ 240 (326)
T 2gjc_A 213 LAGYKNDGTRDLSQKHGVILSTTGHDGP 240 (326)
T ss_dssp ESCCCSSSCCCSSTTCCEEEECCCCC--
T ss_pred EeeccccccccccccCCEEEECcCCCch
Confidence 9 999999998865
No 333
>3q9t_A Choline dehydrogenase and related flavoproteins; glucose-methanol-choline oxidoreductase family, formate OXID formyl-FAD, oxidoreductase; HET: FAY; 2.24A {Aspergillus oryzae}
Probab=97.39 E-value=0.00011 Score=71.40 Aligned_cols=36 Identities=19% Similarity=0.223 Sum_probs=32.8
Q ss_pred CCCcEEEECCchhHHHHHHhhhccC-ceEEEEcCCCc
Q 018704 61 EKPRVVVLGSGWAGCRLMKGIDTSL-YDVVCVSPRNH 96 (351)
Q Consensus 61 ~~~~VvIIG~G~aGl~aA~~L~~~g-~~v~vie~~~~ 96 (351)
..+|+||||||.||+.+|.+|++.+ .+|+|||+.+.
T Consensus 5 ~~yDyIVVGgG~AG~v~A~rLse~~~~~VLllEaG~~ 41 (577)
T 3q9t_A 5 SHFDFVIVGGGTAGNTVAGRLAENPNVTVLIVEAGIG 41 (577)
T ss_dssp CEEEEEEESCSHHHHHHHHHHTTSTTSCEEEECSSCS
T ss_pred CcccEEEECCcHHHHHHHHHHHhCCCCcEEEEecCCC
Confidence 4589999999999999999999987 79999998765
No 334
>1y56_A Hypothetical protein PH1363; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=97.39 E-value=0.00015 Score=69.08 Aligned_cols=90 Identities=22% Similarity=0.378 Sum_probs=61.9
Q ss_pred CeEEEECCChHHHHHHHHHHHHHHHHHHhhhcCCCCccEEEEEeCCCCCC-----------CC---cHHHHHHHHHHhhh
Q 018704 231 LHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEILS-----------SF---DDRLRHYATTQLSK 296 (351)
Q Consensus 231 ~~v~VvGgG~~a~e~a~~l~~~~~~~~~~~~~~~~~~~~v~~~~~~~~l~-----------~~---~~~~~~~~~~~l~~ 296 (351)
.+|+|||||..|+.+|..|.+. .+|+++++++.+. .+ ..++...+.+.+ +
T Consensus 109 ~dVvIIGgG~aGl~aA~~L~~~---------------~~V~vie~~~~~GG~~~~~~~~~~g~~~~~~~~~~~l~~~l-~ 172 (493)
T 1y56_A 109 VDVAIIGGGPAGIGAALELQQY---------------LTVALIEERGWLGGDMWLKGIKQEGFNKDSRKVVEELVGKL-N 172 (493)
T ss_dssp ESCCEECCSHHHHHHHHHHTTT---------------CCEEEECTTSSSSCSGGGTCSEETTTTEEHHHHHHHHHHTC-C
T ss_pred CCEEEECccHHHHHHHHHHHhc---------------CCEEEEeCCCCCCCeeeccccccCCCCCCHHHHHHHHHHHH-h
Confidence 3799999999999999988752 5799999864221 11 123333334444 6
Q ss_pred cCcEEEcCe-EEEEeCC--eEEe---cCCc--EEeccEEEEecCCCCc
Q 018704 297 SGVRLVRGI-VKDVDSQ--KLIL---NDGT--EVPYGLLVWSTGVGPS 336 (351)
Q Consensus 297 ~gV~~~~~~-v~~v~~~--~v~~---~~g~--~~~~D~vi~a~G~~p~ 336 (351)
.+++++.+. +.++..+ .+.. .+++ ++.+|.+|+|||..|.
T Consensus 173 ~~v~~~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~d~lvlAtGa~~~ 220 (493)
T 1y56_A 173 ENTKIYLETSALGVFDKGEYFLVPVVRGDKLIEILAKRVVLATGAIDS 220 (493)
T ss_dssp TTEEEETTEEECCCEECSSSEEEEEEETTEEEEEEESCEEECCCEEEC
T ss_pred cCCEEEcCCEEEEEEcCCcEEEEEEecCCeEEEEECCEEEECCCCCcc
Confidence 699999884 7766542 2322 4454 6899999999998876
No 335
>2e4g_A Tryptophan halogenase; flavin-binding, rebeccamycin biosynthesis, biosynthetic protein, flavoprotein; HET: TRP; 2.08A {Lechevalieria aerocolonigenes} PDB: 2o9z_A 2oa1_A* 2oal_A* 2oam_A
Probab=97.38 E-value=0.0018 Score=62.60 Aligned_cols=33 Identities=27% Similarity=0.403 Sum_probs=29.5
Q ss_pred CeEEEECCChHHHHHHHHHHH---HHHHHHHhhhcCCCCccEEEEEeCCC
Q 018704 231 LHCVVVGGGPTGVEFSGELSD---FIMRDVRQRYSHVKDYIHVTLIEANE 277 (351)
Q Consensus 231 ~~v~VvGgG~~a~e~a~~l~~---~~~~~~~~~~~~~~~~~~v~~~~~~~ 277 (351)
.+|+|||||..|+-+|..|++ .+ .+|+++++..
T Consensus 26 ~dVvIVGgG~aGl~aA~~La~~~~~G--------------~~V~liE~~~ 61 (550)
T 2e4g_A 26 DKILIVGGGTAGWMAASYLGKALQGT--------------ADITLLQAPD 61 (550)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTTTS--------------SEEEEEECCC
T ss_pred CcEEEECCCHHHHHHHHHHHhhcCCC--------------CcEEEEeCCC
Confidence 489999999999999999988 44 8999999964
No 336
>1ju2_A HydroxynitrIle lyase; flavin, GMC oxidoreductase, almond, cyanogenesis; HET: NAG NDG FUC BMA MAN FAD; 1.47A {Prunus dulcis} SCOP: c.3.1.2 d.16.1.1 PDB: 3gdp_A* 3gdn_A*
Probab=97.38 E-value=8.8e-05 Score=71.54 Aligned_cols=34 Identities=24% Similarity=0.470 Sum_probs=32.1
Q ss_pred CCcEEEECCchhHHHHHHhhhccCceEEEEcCCCc
Q 018704 62 KPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRNH 96 (351)
Q Consensus 62 ~~~VvIIG~G~aGl~aA~~L~~~g~~v~vie~~~~ 96 (351)
.+|+||||||.||+.+|.+|++ |.+|+|+|+.+.
T Consensus 26 ~yD~IIVGsG~AG~v~A~rLse-g~~VlvLEaG~~ 59 (536)
T 1ju2_A 26 SYDYVIVGGGTSGCPLAATLSE-KYKVLVLERGSL 59 (536)
T ss_dssp EEEEEEECCSTTHHHHHHHHTT-TSCEEEECSSBC
T ss_pred cccEEEECccHHHHHHHHHHhc-CCcEEEEecCCC
Confidence 4899999999999999999999 999999999865
No 337
>3c4a_A Probable tryptophan hydroxylase VIOD; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.30A {Chromobacterium violaceum atcc 12472}
Probab=97.35 E-value=0.00025 Score=65.17 Aligned_cols=83 Identities=20% Similarity=0.369 Sum_probs=61.5
Q ss_pred eEEEECCChHHHHHHHHHHHH--HHHHHHhhhcCCCCccEEEEEeCCCCC------------------------CC----
Q 018704 232 HCVVVGGGPTGVEFSGELSDF--IMRDVRQRYSHVKDYIHVTLIEANEIL------------------------SS---- 281 (351)
Q Consensus 232 ~v~VvGgG~~a~e~a~~l~~~--~~~~~~~~~~~~~~~~~v~~~~~~~~l------------------------~~---- 281 (351)
+|+|||||.+|+-+|..|++. | .+|+++++.... ..
T Consensus 2 dV~IVGaG~aGl~~A~~L~~~~~G--------------~~V~v~E~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 67 (381)
T 3c4a_A 2 KILVIGAGPAGLVFASQLKQARPL--------------WAIDIVEKNDEQEVLGWGVVLPGRPGQHPANPLSYLDAPERL 67 (381)
T ss_dssp EEEEECCSHHHHHHHHHHHHHCTT--------------SEEEEECSSCTTCCCCSEEEEESCTTTCTTCGGGGSSCGGGG
T ss_pred eEEEECCCHHHHHHHHHHHhcCCC--------------CCEEEEECCCCCCcceeEEEeCcHHHHhhcCcchhhhhhHHH
Confidence 799999999999999999987 6 788888875211 00
Q ss_pred ----------------------------CcHHHHHHHHHHhhhcCcEEEcCe-EEEEeCCeEEecCCcEEeccEEEEecC
Q 018704 282 ----------------------------FDDRLRHYATTQLSKSGVRLVRGI-VKDVDSQKLILNDGTEVPYGLLVWSTG 332 (351)
Q Consensus 282 ----------------------------~~~~~~~~~~~~l~~~gV~~~~~~-v~~v~~~~v~~~~g~~~~~D~vi~a~G 332 (351)
....+.+.+.+.+++.|++++.+. |++++.. ..+++|.||.|.|
T Consensus 68 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~gv~i~~~~~v~~i~~~-------~~~~ad~vV~AdG 140 (381)
T 3c4a_A 68 NPQFLEDFKLVHHNEPSLMSTGVLLCGVERRGLVHALRDKCRSQGIAIRFESPLLEHGEL-------PLADYDLVVLANG 140 (381)
T ss_dssp CCEEECCEEEEESSSEEECCCCSCEEEEEHHHHHHHHHHHHHHTTCEEETTCCCCSGGGC-------CGGGCSEEEECCG
T ss_pred hhccccceEEEeCCeeEEecCCCceeeecHHHHHHHHHHHHHHCCCEEEeCCEeccchhc-------ccccCCEEEECCC
Confidence 013455666777777799999984 8777542 1367999999999
Q ss_pred CCC
Q 018704 333 VGP 335 (351)
Q Consensus 333 ~~p 335 (351)
...
T Consensus 141 ~~S 143 (381)
T 3c4a_A 141 VNH 143 (381)
T ss_dssp GGG
T ss_pred CCc
Confidence 765
No 338
>2pyx_A Tryptophan halogenase; structural genomics, JOI for structural genomics, JCSG, protein structure initiative biosynthetic protein; HET: MSE TLA PG4; 1.50A {Shewanella frigidimarina}
Probab=97.34 E-value=0.0017 Score=62.44 Aligned_cols=50 Identities=24% Similarity=0.306 Sum_probs=37.9
Q ss_pred HHHHHHHhhh-cCcEEEcCeEEEEeC--C----eEEecCCcEEeccEEEEecCCCCc
Q 018704 287 RHYATTQLSK-SGVRLVRGIVKDVDS--Q----KLILNDGTEVPYGLLVWSTGVGPS 336 (351)
Q Consensus 287 ~~~~~~~l~~-~gV~~~~~~v~~v~~--~----~v~~~~g~~~~~D~vi~a~G~~p~ 336 (351)
.+.+.+.+++ .||+++.++|+++.. + .|.+.+|.++.+|.||.|+|.+..
T Consensus 178 ~~~L~~~a~~~~Gv~i~~~~v~~i~~~~~g~~~~v~~~~g~~i~ad~vV~AdG~~S~ 234 (526)
T 2pyx_A 178 SQLLTEHCTQKLGVTHIRDHVSQIINNQHGDIEKLITKQNGEISGQLFIDCTGAKSL 234 (526)
T ss_dssp HHHHHHHHHHTSCCEEEECCEEEEEECTTSCEEEEEESSSCEEECSEEEECSGGGCC
T ss_pred HHHHHHHHHhcCCCEEEEeEEEEEEecCCCcEEEEEECCCCEEEcCEEEECCCcchH
Confidence 3444555666 799999998888753 2 466678778999999999998765
No 339
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=97.31 E-value=0.00023 Score=71.30 Aligned_cols=106 Identities=17% Similarity=0.163 Sum_probs=63.3
Q ss_pred CCcEEEEC--CchhHHHHHHhhhccCceEEEEcCCCccccchhhhhhhcccccccccccchhccchhhhcCCCeEEEE-E
Q 018704 62 KPRVVVLG--SGWAGCRLMKGIDTSLYDVVCVSPRNHMVFTPLLASTCVGTLEFRSVAEPIARIQPAISREPGSYFFL-S 138 (351)
Q Consensus 62 ~~~VvIIG--~G~aGl~aA~~L~~~g~~v~vie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 138 (351)
..+|+||| ||..|+.+|..|++.|.+|+|+++.+ +...... ... ...+ .. .....++.++. .
T Consensus 528 gk~VvVIG~GgG~~g~e~A~~l~~~G~~Vtlv~~~~-l~~~~~~--------~~~--~~~~---~~-~l~~~GV~i~~~~ 592 (729)
T 1o94_A 528 GKRVVILNADTYFMAPSLAEKLATAGHEVTIVSGVH-LANYMHF--------TLE--YPNM---MR-RLHELHVEELGDH 592 (729)
T ss_dssp CSEEEEEECCCSSHHHHHHHHHHHTTCEEEEEESSC-TTHHHHH--------TTC--HHHH---HH-HHHHTTCEEECSE
T ss_pred CCeEEEEcCCCCchHHHHHHHHHHcCCEEEEEeccc-ccccccc--------ccc--HHHH---HH-HHHhCCCEEEcCc
Confidence 46899999 99999999999999999999999977 3210000 000 0111 11 12234677665 4
Q ss_pred EeeeEeCCCCEEEEEee-cCcccc-----------CCCceeEeeccEEEEecCCCcCC
Q 018704 139 HCAGIDTDNHVVHCETV-TDELRT-----------LEPWKFKISYDKLVIALGAEAST 184 (351)
Q Consensus 139 ~v~~i~~~~~~v~~~~~-~~~~~~-----------~~~~~~~~~~d~lviAtG~~p~~ 184 (351)
.++.++.+. +.++.. .++... .+.....+.+|.||+|+|..|..
T Consensus 593 ~v~~i~~~~--v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~aD~Vv~a~G~~p~~ 648 (729)
T 1o94_A 593 FCSRIEPGR--MEIYNIWGDGSKRTYRGPGVSPRDANTSHRWIEFDSLVLVTGRHSEC 648 (729)
T ss_dssp EEEEEETTE--EEEEETTCSCSCCCCCCTTSCSSCCCCCCEEEECSEEEEESCEEECC
T ss_pred EEEEEECCe--EEEEEecCCceEEecccccccccccCCcceeeeCCEEEECCCCCCCh
Confidence 677777543 333221 111100 00112348999999999987654
No 340
>2qcu_A Aerobic glycerol-3-phosphate dehydrogenase; glycerol-3-phoshate dehydrogenase, oxidoreductase; HET: BOG FAD TAM; 1.75A {Escherichia coli} PDB: 2r45_A* 2r46_A* 2r4e_A* 2r4j_A*
Probab=97.31 E-value=0.00075 Score=64.43 Aligned_cols=56 Identities=14% Similarity=0.077 Sum_probs=41.2
Q ss_pred HHHHHHHHHhhhcCcEEEcCe-EEEEeC--C--eEEec---CCc--EEeccEEEEecCCCCccccc
Q 018704 285 RLRHYATTQLSKSGVRLVRGI-VKDVDS--Q--KLILN---DGT--EVPYGLLVWSTGVGPSTLVK 340 (351)
Q Consensus 285 ~~~~~~~~~l~~~gV~~~~~~-v~~v~~--~--~v~~~---~g~--~~~~D~vi~a~G~~p~~~~~ 340 (351)
.+...+.+.+++.|++++.+. |+++.. + +|.+. +|+ ++.+|.||.|+|.+...+..
T Consensus 150 ~l~~~l~~~a~~~Gv~i~~~~~V~~l~~~~~~~~V~~~d~~~G~~~~i~A~~VV~AtG~~s~~l~~ 215 (501)
T 2qcu_A 150 RLVLANAQMVVRKGGEVLTRTRATSARRENGLWIVEAEDIDTGKKYSWQARGLVNATGPWVKQFFD 215 (501)
T ss_dssp HHHHHHHHHHHHTTCEEECSEEEEEEEEETTEEEEEEEETTTCCEEEEEESCEEECCGGGHHHHHH
T ss_pred HHHHHHHHHHHHcCCEEEcCcEEEEEEEeCCEEEEEEEECCCCCEEEEECCEEEECCChhHHHHHH
Confidence 345566677778899999984 888753 2 46663 565 68999999999988765544
No 341
>2weu_A Tryptophan 5-halogenase; regioselectivity, antifungal protei; HET: TRP; 1.70A {Streptomyces rugosporus} PDB: 2wet_A* 2wes_A*
Probab=97.25 E-value=0.002 Score=61.50 Aligned_cols=52 Identities=23% Similarity=0.222 Sum_probs=39.9
Q ss_pred HHHHHHHHHhhhcCcEEEcCeEEEEeC--C----eEEecCCcEEeccEEEEecCCCCc
Q 018704 285 RLRHYATTQLSKSGVRLVRGIVKDVDS--Q----KLILNDGTEVPYGLLVWSTGVGPS 336 (351)
Q Consensus 285 ~~~~~~~~~l~~~gV~~~~~~v~~v~~--~----~v~~~~g~~~~~D~vi~a~G~~p~ 336 (351)
.+.+.+.+.+++.||+++.++|+++.. + +|.+.+|+++++|.||.|+|.+..
T Consensus 174 ~l~~~L~~~a~~~gv~~~~~~v~~i~~~~~~~~~~v~~~~g~~~~ad~vV~A~G~~S~ 231 (511)
T 2weu_A 174 EVARYLSEYAIARGVRHVVDDVQHVGQDERGWISGVHTKQHGEISGDLFVDCTGFRGL 231 (511)
T ss_dssp HHHHHHHHHHHHTTCEEEECCEEEEEECTTSCEEEEEESSSCEEECSEEEECCGGGCC
T ss_pred HHHHHHHHHHHHCCCEEEECeEeEEEEcCCCCEEEEEECCCCEEEcCEEEECCCcchH
Confidence 344555666677899999988888753 2 366778888999999999998765
No 342
>1coy_A Cholesterol oxidase; oxidoreductase(oxygen receptor); HET: AND FAD; 1.80A {Brevibacterium sterolicum} SCOP: c.3.1.2 d.16.1.1 PDB: 3cox_A*
Probab=97.22 E-value=0.00022 Score=68.33 Aligned_cols=36 Identities=17% Similarity=0.249 Sum_probs=33.5
Q ss_pred CCCcEEEECCchhHHHHHHhhhccCceEEEEcCCCc
Q 018704 61 EKPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRNH 96 (351)
Q Consensus 61 ~~~~VvIIG~G~aGl~aA~~L~~~g~~v~vie~~~~ 96 (351)
..+|++|||+|++|+.+|.+|++.|.+|+|+|+...
T Consensus 10 ~~~d~~iiG~G~~g~~~a~~l~~~~~~v~~~e~~~~ 45 (507)
T 1coy_A 10 DRVPALVIGSGYGGAVAALRLTQAGIPTQIVEMGRS 45 (507)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSCC
T ss_pred CcCCEEEECCCHHHHHHHHHHHHCCCcEEEEECCCC
Confidence 458999999999999999999999999999998765
No 343
>3qvp_A Glucose oxidase; oxidoreductase; HET: NAG BMA MAN FAD; 1.20A {Aspergillus niger} PDB: 1gal_A* 1cf3_A* 3qvr_A*
Probab=97.20 E-value=0.0002 Score=69.51 Aligned_cols=35 Identities=11% Similarity=0.249 Sum_probs=32.2
Q ss_pred CCCcEEEECCchhHHHHHHhhhc-cCceEEEEcCCC
Q 018704 61 EKPRVVVLGSGWAGCRLMKGIDT-SLYDVVCVSPRN 95 (351)
Q Consensus 61 ~~~~VvIIG~G~aGl~aA~~L~~-~g~~v~vie~~~ 95 (351)
..+|+||||||.||+.+|.+|++ .+.+|+|+|+.+
T Consensus 18 ~~yDyIIVGgG~AG~vlA~RLse~~~~~VLlLEaG~ 53 (583)
T 3qvp_A 18 RTVDYIIAGGGLTGLTTAARLTENPNISVLVIESGS 53 (583)
T ss_dssp CEEEEEEECCSHHHHHHHHHHTTSTTCCEEEECSSC
T ss_pred CCccEEEECCcHHHHHHHHHHHhCCCCcEEEEecCC
Confidence 45899999999999999999997 589999999977
No 344
>1n4w_A CHOD, cholesterol oxidase; flavoenzyme, steroid metabolism, oxidoreductase, atomic RESO; HET: FAD; 0.92A {Streptomyces SP} SCOP: c.3.1.2 d.16.1.1 PDB: 1b4v_A* 1n1p_A* 1n4u_A* 1n4v_A* 1mxt_A* 2gew_A* 1b8s_A* 3gyi_A* 1cc2_A* 3gyj_A* 1ijh_A* 1cbo_A* 3b3r_A* 3b6d_A* 3cnj_A*
Probab=97.20 E-value=0.00018 Score=68.89 Aligned_cols=37 Identities=11% Similarity=0.120 Sum_probs=33.7
Q ss_pred CCCcEEEECCchhHHHHHHhhhccCceEEEEcCCCcc
Q 018704 61 EKPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRNHM 97 (351)
Q Consensus 61 ~~~~VvIIG~G~aGl~aA~~L~~~g~~v~vie~~~~~ 97 (351)
..+|++|||+|++|+.+|.+|++.|.+|+|+|+....
T Consensus 4 ~~~d~~iiG~G~~g~~~a~~l~~~~~~v~~~e~~~~~ 40 (504)
T 1n4w_A 4 GYVPAVVIGTGYGAAVSALRLGEAGVQTLMLEMGQLW 40 (504)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSCCC
T ss_pred CcCCEEEECCCHHHHHHHHHHHhCCCcEEEEeCCCCC
Confidence 3479999999999999999999999999999988754
No 345
>3oz2_A Digeranylgeranylglycerophospholipid reductase; structural genomics, joint center for structural genomics; HET: MSE FAD OZ2; 1.60A {Thermoplasma acidophilum}
Probab=97.17 E-value=0.0013 Score=60.00 Aligned_cols=91 Identities=18% Similarity=0.318 Sum_probs=63.0
Q ss_pred eEEEECCChHHHHHHHHHHHHHHHHHHhhhcCCCCccEEEEEeCCCCCC-------C-----------------------
Q 018704 232 HCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEILS-------S----------------------- 281 (351)
Q Consensus 232 ~v~VvGgG~~a~e~a~~l~~~~~~~~~~~~~~~~~~~~v~~~~~~~~l~-------~----------------------- 281 (351)
.|+|||||++|+-+|..|++.| .+|+++++.+..+ .
T Consensus 6 DViIVGaGpaGl~~A~~La~~G--------------~~V~v~Er~~~~~~~~~~g~~l~~~~l~~l~~~~~~~~~~~~~~ 71 (397)
T 3oz2_A 6 DVLVVGGGPGGSTAARYAAKYG--------------LKTLMIEKRPEIGSPVRCGEGLSKGILNEADIKADRSFIANEVK 71 (397)
T ss_dssp EEEEECCSHHHHHHHHHHHHTT--------------CCEEEECSSSSTTCSCCSCCEEETHHHHHTTCCCCTTTEEEEES
T ss_pred CEEEECcCHHHHHHHHHHHHCC--------------CcEEEEeCCCCCCCCCceecccCHHHHHHcCCCchhhhhhcccc
Confidence 6999999999999999999877 7777777642100 0
Q ss_pred ---------------------------Cc-HHHHHHHHHHhhhcCcEEEcCe-EEEEeC--CeEE---e-cCC--cEEec
Q 018704 282 ---------------------------FD-DRLRHYATTQLSKSGVRLVRGI-VKDVDS--QKLI---L-NDG--TEVPY 324 (351)
Q Consensus 282 ---------------------------~~-~~~~~~~~~~l~~~gV~~~~~~-v~~v~~--~~v~---~-~~g--~~~~~ 324 (351)
++ ..+.+.+.+.+.+.|++++.+. ++++.. +.+. . .+| .++.+
T Consensus 72 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~R~~~~~~L~~~a~~~G~~~~~~~~v~~~~~~~~~~~~v~~~~~~~~~~~~a 151 (397)
T 3oz2_A 72 GARIYGPSEKRPIILQSEKAGNEVGYVLERDKFDKHLAALAAKAGADVWVKSPALGVIKENGKVAGAKIRHNNEIVDVRA 151 (397)
T ss_dssp EEEEECTTCSSCEEEECSSSSCCCEEEECHHHHHHHHHHHHHHHTCEEESSCCEEEEEEETTEEEEEEEEETTEEEEEEE
T ss_pred eEEEEeCCCceEeeccccccCCceeEEEEHHHHHHHHHHHHHhcCcEEeeeeeeeeeeeccceeeeeeecccccceEEEE
Confidence 00 1234556666778899999994 776543 3322 2 233 35889
Q ss_pred cEEEEecCCCCc
Q 018704 325 GLLVWSTGVGPS 336 (351)
Q Consensus 325 D~vi~a~G~~p~ 336 (351)
|.||-|.|....
T Consensus 152 ~~vIgAdG~~S~ 163 (397)
T 3oz2_A 152 KMVIAADGFESE 163 (397)
T ss_dssp EEEEECCCTTCH
T ss_pred eEEEeCCccccH
Confidence 999999997654
No 346
>4at0_A 3-ketosteroid-delta4-5alpha-dehydrogenase; oxidoreductase, dehydogenase, steroid catabolism; HET: FAD; 1.60A {Rhodococcus jostii} PDB: 4at2_A*
Probab=97.17 E-value=0.0022 Score=61.27 Aligned_cols=51 Identities=22% Similarity=0.182 Sum_probs=36.4
Q ss_pred HHHHHHHHHhhhcCcEEEcCe-EEEEeCC------eEEec-CCc--EEecc-EEEEecCCCC
Q 018704 285 RLRHYATTQLSKSGVRLVRGI-VKDVDSQ------KLILN-DGT--EVPYG-LLVWSTGVGP 335 (351)
Q Consensus 285 ~~~~~~~~~l~~~gV~~~~~~-v~~v~~~------~v~~~-~g~--~~~~D-~vi~a~G~~p 335 (351)
.+...+.+.+++.||+++++. |+++..+ +|++. +|+ ++.+| .||+|+|-..
T Consensus 203 ~l~~~L~~~~~~~Gv~i~~~t~v~~L~~~~~g~v~GV~~~~~g~~~~i~A~k~VVlAtGG~~ 264 (510)
T 4at0_A 203 MLMKPLVETAEKLGVRAEYDMRVQTLVTDDTGRVVGIVAKQYGKEVAVRARRGVVLATGSFA 264 (510)
T ss_dssp HHHHHHHHHHHHTTCEEECSEEEEEEEECTTCCEEEEEEEETTEEEEEEEEEEEEECCCCCT
T ss_pred HHHHHHHHHHHHcCCEEEecCEeEEEEECCCCcEEEEEEEECCcEEEEEeCCeEEEeCCChh
Confidence 455566667778899999995 8887532 45554 343 48896 9999999665
No 347
>3fim_B ARYL-alcohol oxidase; AAO, lignin degradation, oxidoreductase, flavoprotein; HET: FAD; 2.55A {Pleurotus eryngii}
Probab=97.10 E-value=0.00021 Score=69.13 Aligned_cols=36 Identities=19% Similarity=0.179 Sum_probs=32.8
Q ss_pred CCcEEEECCchhHHHHHHhhhc-cCceEEEEcCCCcc
Q 018704 62 KPRVVVLGSGWAGCRLMKGIDT-SLYDVVCVSPRNHM 97 (351)
Q Consensus 62 ~~~VvIIG~G~aGl~aA~~L~~-~g~~v~vie~~~~~ 97 (351)
.+|+||||||.||+.+|.+|++ .+.+|+|+|+.+..
T Consensus 2 ~yD~IIVG~G~aG~v~A~rLse~~~~~VlllEaG~~~ 38 (566)
T 3fim_B 2 DFDYVVVGAGNAGNVVAARLTEDPDVSVLVLEAGVSD 38 (566)
T ss_dssp CEEEEESCCSTTHHHHHHHHTTSTTCCEEEECSSBCC
T ss_pred CcCEEEECCcHHHHHHHHHHHhCcCCcEEEEecCCcc
Confidence 4799999999999999999998 79999999987653
No 348
>1gpe_A Protein (glucose oxidase); oxidoreductase(flavoprotein); HET: NAG BMA MAN FAD; 1.80A {Penicillium amagasakiense} SCOP: c.3.1.2 d.16.1.1
Probab=97.04 E-value=0.00046 Score=67.24 Aligned_cols=37 Identities=11% Similarity=0.184 Sum_probs=33.7
Q ss_pred CCCcEEEECCchhHHHHHHhhhc-cCceEEEEcCCCcc
Q 018704 61 EKPRVVVLGSGWAGCRLMKGIDT-SLYDVVCVSPRNHM 97 (351)
Q Consensus 61 ~~~~VvIIG~G~aGl~aA~~L~~-~g~~v~vie~~~~~ 97 (351)
..+|++|||+|++|+.+|.+|++ .|.+|+|+|+....
T Consensus 23 ~~~d~iivG~G~~g~~~a~~l~~~~~~~v~~~e~g~~~ 60 (587)
T 1gpe_A 23 KTYDYIIAGGGLTGLTVAAKLTENPKIKVLVIEKGFYE 60 (587)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHTSTTCCEEEEESSCCC
T ss_pred ccCCEEEECcCHHHHHHHHHHHhCCCCcEEEEecCCcc
Confidence 45899999999999999999999 89999999998654
No 349
>2jbv_A Choline oxidase; alcohol oxidation, flavoenyzme oxidase, covalently linked FAD, C4A-adduct, flavoprotein, oxidoreductase; HET: FAO; 1.86A {Arthrobacter globiformis} PDB: 3nne_A* 3ljp_A*
Probab=97.02 E-value=0.0004 Score=67.05 Aligned_cols=37 Identities=19% Similarity=0.244 Sum_probs=33.5
Q ss_pred CCCcEEEECCchhHHHHHHhhhcc-CceEEEEcCCCcc
Q 018704 61 EKPRVVVLGSGWAGCRLMKGIDTS-LYDVVCVSPRNHM 97 (351)
Q Consensus 61 ~~~~VvIIG~G~aGl~aA~~L~~~-g~~v~vie~~~~~ 97 (351)
+.+|++|||+|++|+.+|.+|++. |.+|+|+|+....
T Consensus 12 ~~~d~~ivG~G~~G~~~a~~l~~~~~~~v~~~e~g~~~ 49 (546)
T 2jbv_A 12 REFDYIVVGGGSAGAAVAARLSEDPAVSVALVEAGPDD 49 (546)
T ss_dssp CEEEEEEECCSHHHHHHHHHHTTSTTSCEEEECSSCCC
T ss_pred CcCCEEEECcCHHHHHHHHHHHhCCCCCEEEEecCCcC
Confidence 358999999999999999999997 8999999998653
No 350
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=97.00 E-value=0.00071 Score=52.69 Aligned_cols=37 Identities=16% Similarity=0.195 Sum_probs=33.4
Q ss_pred CCCCcEEEECCchhHHHHHHhhhccCceEEEEcCCCc
Q 018704 60 NEKPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRNH 96 (351)
Q Consensus 60 ~~~~~VvIIG~G~aGl~aA~~L~~~g~~v~vie~~~~ 96 (351)
....+|+|||+|..|...|..|.+.|++|+++|+++.
T Consensus 5 ~~~~~viIiG~G~~G~~la~~L~~~g~~v~vid~~~~ 41 (140)
T 3fwz_A 5 DICNHALLVGYGRVGSLLGEKLLASDIPLVVIETSRT 41 (140)
T ss_dssp CCCSCEEEECCSHHHHHHHHHHHHTTCCEEEEESCHH
T ss_pred cCCCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCHH
Confidence 3457899999999999999999999999999999654
No 351
>2e5v_A L-aspartate oxidase; archaea, oxidoreductase; HET: FAD; 2.09A {Sulfolobus tokodaii}
Probab=96.97 E-value=0.0028 Score=59.95 Aligned_cols=49 Identities=16% Similarity=0.231 Sum_probs=34.3
Q ss_pred HHHHHHHhhhcCcEEEcCe-EEEEe--CCe---EEec-CCcEEeccEEEEecCCCCc
Q 018704 287 RHYATTQLSKSGVRLVRGI-VKDVD--SQK---LILN-DGTEVPYGLLVWSTGVGPS 336 (351)
Q Consensus 287 ~~~~~~~l~~~gV~~~~~~-v~~v~--~~~---v~~~-~g~~~~~D~vi~a~G~~p~ 336 (351)
.+.+.+.+++.||+++.+. + ++. ++. +.+. ++.++.+|.||+|+|..+.
T Consensus 122 ~~~L~~~~~~~gv~i~~~~~v-~l~~~~~~v~Gv~v~~~~g~~~a~~VVlAtGg~~~ 177 (472)
T 2e5v_A 122 FNFLLKLAREEGIPIIEDRLV-EIRVKDGKVTGFVTEKRGLVEDVDKLVLATGGYSY 177 (472)
T ss_dssp HHHHHHHHHHTTCCEECCCEE-EEEEETTEEEEEEETTTEEECCCSEEEECCCCCGG
T ss_pred HHHHHHHHHhCCCEEEECcEE-EEEEeCCEEEEEEEEeCCCeEEeeeEEECCCCCcc
Confidence 3445555667799999995 8 874 343 3443 2335789999999998876
No 352
>2dkh_A 3-hydroxybenzoate hydroxylase; flavoprotein, monooxygenase, complex, oxidoreductase; HET: FAD 3HB; 1.80A {Comamonas testosteroni} PDB: 2dki_A*
Probab=96.85 E-value=0.0031 Score=62.08 Aligned_cols=52 Identities=19% Similarity=0.188 Sum_probs=38.0
Q ss_pred HHHHHHHHHhhhcCc--EEEcCe-EEEEeCC--------eEEec------CC--cEEeccEEEEecCCCCc
Q 018704 285 RLRHYATTQLSKSGV--RLVRGI-VKDVDSQ--------KLILN------DG--TEVPYGLLVWSTGVGPS 336 (351)
Q Consensus 285 ~~~~~~~~~l~~~gV--~~~~~~-v~~v~~~--------~v~~~------~g--~~~~~D~vi~a~G~~p~ 336 (351)
.+.+.+.+.+++.|+ +++.+. |++++.+ .+.+. +| .++.+|.||.|.|.+..
T Consensus 142 ~l~~~L~~~a~~~g~~v~v~~~~~v~~l~~~~~~~~~~v~v~~~~~~~~~~G~~~~i~a~~vVgADG~~S~ 212 (639)
T 2dkh_A 142 RVHDHYLERMRNSPSRLEPHYARRVLDVKVDHGAADYPVTVTLERCDAAHAGQIETVQARYVVGCDGARSN 212 (639)
T ss_dssp HHHHHHHHHHHHSTTCCCCBCSEEEEEEEECTTCSSCCEEEEEEECSGGGTTCEEEEEEEEEEECCCTTCH
T ss_pred HHHHHHHHHHHhCCCCcEEecCCEEEEEEECCCCCcCCEEEEEEeccccCCCCeEEEEeCEEEECCCcchH
Confidence 455667777888876 999995 8888532 23443 46 46899999999998765
No 353
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=96.79 E-value=0.0013 Score=52.03 Aligned_cols=36 Identities=22% Similarity=0.283 Sum_probs=32.5
Q ss_pred CCCcEEEECCchhHHHHHHhhhccCceEEEEcCCCc
Q 018704 61 EKPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRNH 96 (351)
Q Consensus 61 ~~~~VvIIG~G~aGl~aA~~L~~~g~~v~vie~~~~ 96 (351)
...+|+|||+|..|..+|..|.+.|++|+++|+++.
T Consensus 18 ~~~~v~IiG~G~iG~~la~~L~~~g~~V~vid~~~~ 53 (155)
T 2g1u_A 18 KSKYIVIFGCGRLGSLIANLASSSGHSVVVVDKNEY 53 (155)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCGG
T ss_pred CCCcEEEECCCHHHHHHHHHHHhCCCeEEEEECCHH
Confidence 347899999999999999999999999999998654
No 354
>2rgh_A Alpha-glycerophosphate oxidase; flavoprotein oxidase, oxidoreductase; HET: FAD; 2.30A {Streptococcus SP} PDB: 2rgo_A*
Probab=96.77 E-value=0.0054 Score=59.49 Aligned_cols=58 Identities=12% Similarity=0.036 Sum_probs=39.5
Q ss_pred HHHHHHHHhhhcCcEEEcCe-EEEEeC--C---eEEec---CCc--EEeccEEEEecCCCCccccccCC
Q 018704 286 LRHYATTQLSKSGVRLVRGI-VKDVDS--Q---KLILN---DGT--EVPYGLLVWSTGVGPSTLVKSLD 343 (351)
Q Consensus 286 ~~~~~~~~l~~~gV~~~~~~-v~~v~~--~---~v~~~---~g~--~~~~D~vi~a~G~~p~~~~~~~g 343 (351)
+...+.+.+.+.|++++.++ |+++.. + +|.+. +|+ ++.||.||+|+|.+...+....+
T Consensus 190 l~~~l~~~a~~~Ga~i~~~t~V~~l~~~~~~v~gV~~~d~~tg~~~~i~A~~VV~AaG~ws~~l~~~~g 258 (571)
T 2rgh_A 190 LVIDNIKKAAEDGAYLVSKMKAVGFLYEGDQIVGVKARDLLTDEVIEIKAKLVINTSGPWVDKVRNLNF 258 (571)
T ss_dssp HHHHHHHHHHHTTCEEESSEEEEEEEEETTEEEEEEEEETTTCCEEEEEBSCEEECCGGGHHHHHTTCC
T ss_pred HHHHHHHHHHHcCCeEEeccEEEEEEEeCCEEEEEEEEEcCCCCEEEEEcCEEEECCChhHHHHHHhhc
Confidence 33445556677899999994 888753 3 35543 343 68999999999987665554443
No 355
>2r0c_A REBC; flavin adenine dinucleotide, monooxygenase, oxidoreductase; HET: FAD; 1.80A {Lechevalieria aerocolonigenes} PDB: 2r0g_A* 2r0p_A* 3ept_A*
Probab=96.69 E-value=0.01 Score=57.20 Aligned_cols=49 Identities=16% Similarity=0.225 Sum_probs=33.3
Q ss_pred HHHHHHHHHhhhcCcEEEcCe-EEEEeC--Ce--EEecC---C--cEEeccEEEEecCCCCc
Q 018704 285 RLRHYATTQLSKSGVRLVRGI-VKDVDS--QK--LILND---G--TEVPYGLLVWSTGVGPS 336 (351)
Q Consensus 285 ~~~~~~~~~l~~~gV~~~~~~-v~~v~~--~~--v~~~~---g--~~~~~D~vi~a~G~~p~ 336 (351)
.+.+.+.+.+++. ++.+. |++++. ++ +++.+ | .++.+|.||.|.|....
T Consensus 139 ~l~~~L~~~a~~~---v~~~~~v~~~~~~~~~v~v~~~~~~~G~~~~i~a~~vVgADG~~S~ 197 (549)
T 2r0c_A 139 WLAPLLAEAVGER---LRTRSRLDSFEQRDDHVRATITDLRTGATRAVHARYLVACDGASSP 197 (549)
T ss_dssp HHHHHHHHHHGGG---EECSEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEEEECCCTTCH
T ss_pred HHHHHHHHHHHHh---cccCcEEEEEEEeCCEEEEEEEECCCCCEEEEEeCEEEECCCCCcH
Confidence 3445555666555 77784 888754 33 44544 6 46899999999998765
No 356
>4b63_A L-ornithine N5 monooxygenase; oxidoreductase, siderophore, flavin; HET: FAD NAP; 1.90A {Aspergillus fumigatus} PDB: 4b64_A* 4b65_A* 4b66_A* 4b67_A* 4b68_A* 4b69_A*
Probab=96.67 E-value=0.0065 Score=57.90 Aligned_cols=105 Identities=13% Similarity=0.154 Sum_probs=63.9
Q ss_pred eEEEECCChHHHHHHHHHHHHHHHHHHhhhcCCCCccEEEEEeCCC--------CCCC----------------------
Q 018704 232 HCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANE--------ILSS---------------------- 281 (351)
Q Consensus 232 ~v~VvGgG~~a~e~a~~l~~~~~~~~~~~~~~~~~~~~v~~~~~~~--------~l~~---------------------- 281 (351)
.|+|||+|++|+-+|..|.+.+.+.+..............++++.+ +++.
T Consensus 41 Dvi~IGaGp~gLa~A~~L~~~~~~~~~~~~~~~~~~~~~~f~e~~~~f~Wh~g~~~p~~~~q~~fl~Dlvtl~~P~s~~s 120 (501)
T 4b63_A 41 DLLCVGFGPASLAIAIALHDALDPRLNKSASNIHAQPKICFLERQKQFAWHSGMLVPGSKMQISFIKDLATLRDPRSSFT 120 (501)
T ss_dssp EEEEECCSHHHHHHHHHHHHHHCTTTCTTC----CCCCEEEEESSSSCCSSGGGCCTTCBCSSCGGGSSSTTTCTTCTTS
T ss_pred cEEEEcccHHHHHHHHHHHhcCCCceEEeccccCCCcceeeEeccCCCCcCCCCCCCCccccccchhhhccccCCCCccc
Confidence 7999999999999999998765322222111112234455666532 0110
Q ss_pred --------------------C--cHHHHHHHHHHhhhcCcEEEcCe-EEEEeC---C---------eEEecCC-----cE
Q 018704 282 --------------------F--DDRLRHYATTQLSKSGVRLVRGI-VKDVDS---Q---------KLILNDG-----TE 321 (351)
Q Consensus 282 --------------------~--~~~~~~~~~~~l~~~gV~~~~~~-v~~v~~---~---------~v~~~~g-----~~ 321 (351)
+ -.++.++++...++.+..+..++ |++++. + .|+..++ .+
T Consensus 121 f~~yl~~~~rl~~f~~~~~~~p~r~E~~~Yl~~~A~~~~~~vrf~~~V~~v~~~~~~~~~~~~~~~~V~~~~~~~g~~~~ 200 (501)
T 4b63_A 121 FLNYLHQKGRLIHFTNLSTFLPARLEFEDYMRWCAQQFSDVVAYGEEVVEVIPGKSDPSSSVVDFFTVRSRNVETGEISA 200 (501)
T ss_dssp HHHHHHHHTCHHHHHTTCCSCCBHHHHHHHHHHHHHTTGGGEEESEEEEEEEEECSSTTSSCBCEEEEEEEETTTCCEEE
T ss_pred hHHHHHHhCCccCCccccCCCCCHHHHHHHHHHHHHHcCCceEcceEEEeeccccccccccccceEEEEEecCCCceEEE
Confidence 0 12445556556666677788885 888752 1 3555433 35
Q ss_pred EeccEEEEecCCCCc
Q 018704 322 VPYGLLVWSTGVGPS 336 (351)
Q Consensus 322 ~~~D~vi~a~G~~p~ 336 (351)
+.|+.||+|+|..|.
T Consensus 201 ~~ar~vVlatG~~P~ 215 (501)
T 4b63_A 201 RRTRKVVIAIGGTAK 215 (501)
T ss_dssp EEEEEEEECCCCEEC
T ss_pred EEeCEEEECcCCCCC
Confidence 789999999998877
No 357
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=96.59 E-value=0.0017 Score=50.49 Aligned_cols=35 Identities=23% Similarity=0.350 Sum_probs=31.9
Q ss_pred CCcEEEECCchhHHHHHHhhhccCceEEEEcCCCc
Q 018704 62 KPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRNH 96 (351)
Q Consensus 62 ~~~VvIIG~G~aGl~aA~~L~~~g~~v~vie~~~~ 96 (351)
+.+|+|+|+|..|...|..|.+.|++|+++|+++.
T Consensus 6 ~~~v~I~G~G~iG~~la~~L~~~g~~V~~id~~~~ 40 (141)
T 3llv_A 6 RYEYIVIGSEAAGVGLVRELTAAGKKVLAVDKSKE 40 (141)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEEEESCHH
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCeEEEEECCHH
Confidence 36899999999999999999999999999998653
No 358
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=96.53 E-value=0.0018 Score=54.60 Aligned_cols=75 Identities=16% Similarity=0.124 Sum_probs=50.8
Q ss_pred ccCeEEEECCChHHHHHHHHHHHHHHHHHHhhhcCCCCccEEEEEeCCCCCCCCcHHHHHHHHHHhhhcCcEEEcCeEEE
Q 018704 229 RLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEILSSFDDRLRHYATTQLSKSGVRLVRGIVKD 308 (351)
Q Consensus 229 ~~~~v~VvGgG~~a~e~a~~l~~~~~~~~~~~~~~~~~~~~v~~~~~~~~l~~~~~~~~~~~~~~l~~~gV~~~~~~v~~ 308 (351)
.+++|+|||||.+|...+..|...| .+|+++.+. ..++ +.+..++.+++++.+...
T Consensus 30 ~gk~VLVVGgG~va~~ka~~Ll~~G--------------A~VtVvap~-----~~~~----l~~l~~~~~i~~i~~~~~- 85 (223)
T 3dfz_A 30 KGRSVLVVGGGTIATRRIKGFLQEG--------------AAITVVAPT-----VSAE----INEWEAKGQLRVKRKKVG- 85 (223)
T ss_dssp TTCCEEEECCSHHHHHHHHHHGGGC--------------CCEEEECSS-----CCHH----HHHHHHTTSCEEECSCCC-
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCC--------------CEEEEECCC-----CCHH----HHHHHHcCCcEEEECCCC-
Confidence 4469999999999999999999876 899999763 2233 333444556776654211
Q ss_pred EeCCeEEecCCcEEeccEEEEecCCCCc
Q 018704 309 VDSQKLILNDGTEVPYGLLVWSTGVGPS 336 (351)
Q Consensus 309 v~~~~v~~~~g~~~~~D~vi~a~G~~p~ 336 (351)
.+.--.+|.||.|||-...
T Consensus 86 ---------~~dL~~adLVIaAT~d~~~ 104 (223)
T 3dfz_A 86 ---------EEDLLNVFFIVVATNDQAV 104 (223)
T ss_dssp ---------GGGSSSCSEEEECCCCTHH
T ss_pred ---------HhHhCCCCEEEECCCCHHH
Confidence 1111238999999986643
No 359
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=96.50 E-value=0.0026 Score=50.17 Aligned_cols=34 Identities=15% Similarity=0.153 Sum_probs=31.4
Q ss_pred CCcEEEECCchhHHHHHHhhhccCceEEEEcCCC
Q 018704 62 KPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRN 95 (351)
Q Consensus 62 ~~~VvIIG~G~aGl~aA~~L~~~g~~v~vie~~~ 95 (351)
+.+|+|+|+|..|...|..|.+.|++|+++|+++
T Consensus 3 ~~~vlI~G~G~vG~~la~~L~~~g~~V~vid~~~ 36 (153)
T 1id1_A 3 KDHFIVCGHSILAINTILQLNQRGQNVTVISNLP 36 (153)
T ss_dssp CSCEEEECCSHHHHHHHHHHHHTTCCEEEEECCC
T ss_pred CCcEEEECCCHHHHHHHHHHHHCCCCEEEEECCC
Confidence 4689999999999999999999999999999963
No 360
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=96.49 E-value=0.0021 Score=49.50 Aligned_cols=34 Identities=21% Similarity=0.344 Sum_probs=31.2
Q ss_pred CcEEEECCchhHHHHHHhhhccCceEEEEcCCCc
Q 018704 63 PRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRNH 96 (351)
Q Consensus 63 ~~VvIIG~G~aGl~aA~~L~~~g~~v~vie~~~~ 96 (351)
++|+|||+|..|...|..|.+.|++|+++|+++.
T Consensus 5 m~i~IiG~G~iG~~~a~~L~~~g~~v~~~d~~~~ 38 (140)
T 1lss_A 5 MYIIIAGIGRVGYTLAKSLSEKGHDIVLIDIDKD 38 (140)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESCHH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCeEEEEECCHH
Confidence 5899999999999999999999999999998543
No 361
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=96.45 E-value=0.0022 Score=47.74 Aligned_cols=34 Identities=24% Similarity=0.295 Sum_probs=31.1
Q ss_pred CCcEEEECCchhHHHHHHhhhccC-ceEEEEcCCC
Q 018704 62 KPRVVVLGSGWAGCRLMKGIDTSL-YDVVCVSPRN 95 (351)
Q Consensus 62 ~~~VvIIG~G~aGl~aA~~L~~~g-~~v~vie~~~ 95 (351)
.++|+|+|+|..|..+|..|.+.| ++|+++++++
T Consensus 5 ~~~v~I~G~G~iG~~~~~~l~~~g~~~v~~~~r~~ 39 (118)
T 3ic5_A 5 RWNICVVGAGKIGQMIAALLKTSSNYSVTVADHDL 39 (118)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHCSSEEEEEEESCH
T ss_pred cCeEEEECCCHHHHHHHHHHHhCCCceEEEEeCCH
Confidence 368999999999999999999999 8999999864
No 362
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=96.24 E-value=0.0036 Score=50.94 Aligned_cols=35 Identities=17% Similarity=0.246 Sum_probs=32.0
Q ss_pred CCcEEEECCchhHHHHHHhhhcc-CceEEEEcCCCc
Q 018704 62 KPRVVVLGSGWAGCRLMKGIDTS-LYDVVCVSPRNH 96 (351)
Q Consensus 62 ~~~VvIIG~G~aGl~aA~~L~~~-g~~v~vie~~~~ 96 (351)
..+|+|||+|..|..+|..|.+. |++|+++|+++.
T Consensus 39 ~~~v~IiG~G~~G~~~a~~L~~~~g~~V~vid~~~~ 74 (183)
T 3c85_A 39 HAQVLILGMGRIGTGAYDELRARYGKISLGIEIREE 74 (183)
T ss_dssp TCSEEEECCSHHHHHHHHHHHHHHCSCEEEEESCHH
T ss_pred CCcEEEECCCHHHHHHHHHHHhccCCeEEEEECCHH
Confidence 46899999999999999999998 999999998653
No 363
>1vg0_A RAB proteins geranylgeranyltransferase component A 1; RAB prenylation, post-translational modification, protein binding/protein transport complex; HET: GER GDP PG4; 2.20A {Rattus norvegicus} SCOP: c.3.1.3 d.16.1.6 PDB: 1vg9_A* 1ltx_R*
Probab=96.21 E-value=0.004 Score=60.78 Aligned_cols=54 Identities=9% Similarity=-0.042 Sum_probs=43.6
Q ss_pred HHHHHHHHHHhhhcCcEEEcCe-EEEEe--C--C---eEEecCCcEEeccEEEEecCCCCcc
Q 018704 284 DRLRHYATTQLSKSGVRLVRGI-VKDVD--S--Q---KLILNDGTEVPYGLLVWSTGVGPST 337 (351)
Q Consensus 284 ~~~~~~~~~~l~~~gV~~~~~~-v~~v~--~--~---~v~~~~g~~~~~D~vi~a~G~~p~~ 337 (351)
..+.+.+.+.++..|.++++++ |.+|. + + +|++.+|+++.||.||....+.|..
T Consensus 378 g~L~qaL~r~~~~~Gg~i~l~~~V~~I~~~~~~g~v~gV~~~~Ge~i~A~~VVs~~~~lp~~ 439 (650)
T 1vg0_A 378 GELPQCFCRMCAVFGGIYCLRHSVQCLVVDKESRKCKAVIDQFGQRIISKHFIIEDSYLSEN 439 (650)
T ss_dssp THHHHHHHHHHHHTTCEEESSCCEEEEEEETTTCCEEEEEETTSCEEECSEEEEEGGGBCTT
T ss_pred hHHHHHHHHHHHHcCCEEEeCCEeeEEEEeCCCCeEEEEEeCCCCEEEcCEEEEChhhcCHh
Confidence 4788888889999999999995 88863 3 2 4566789999999999988777653
No 364
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=96.11 E-value=0.0056 Score=51.51 Aligned_cols=35 Identities=26% Similarity=0.350 Sum_probs=32.1
Q ss_pred CCCcEEEECCchhHHHHHHhhhccCceEEEEcCCC
Q 018704 61 EKPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRN 95 (351)
Q Consensus 61 ~~~~VvIIG~G~aGl~aA~~L~~~g~~v~vie~~~ 95 (351)
..++|+|||||..|...|..|.+.|.+|+|++++.
T Consensus 30 ~gk~VLVVGgG~va~~ka~~Ll~~GA~VtVvap~~ 64 (223)
T 3dfz_A 30 KGRSVLVVGGGTIATRRIKGFLQEGAAITVVAPTV 64 (223)
T ss_dssp TTCCEEEECCSHHHHHHHHHHGGGCCCEEEECSSC
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCEEEEECCCC
Confidence 35789999999999999999999999999999853
No 365
>1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A*
Probab=96.03 E-value=0.0066 Score=54.52 Aligned_cols=36 Identities=22% Similarity=0.217 Sum_probs=32.2
Q ss_pred CCCcEEEECCchhHHHHHHhhhccCc-eEEEEcCCCc
Q 018704 61 EKPRVVVLGSGWAGCRLMKGIDTSLY-DVVCVSPRNH 96 (351)
Q Consensus 61 ~~~~VvIIG~G~aGl~aA~~L~~~g~-~v~vie~~~~ 96 (351)
...+|+|||+|..|.+.|..|++.|+ +|+++|.++.
T Consensus 8 ~~~kI~VIGaG~vG~~lA~~la~~g~~~V~L~D~~~~ 44 (331)
T 1pzg_A 8 RRKKVAMIGSGMIGGTMGYLCALRELADVVLYDVVKG 44 (331)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHTCCEEEEECSSSS
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCeEEEEECChh
Confidence 34689999999999999999999998 9999998754
No 366
>4gut_A Lysine-specific histone demethylase 1B; histone demethylase; HET: FAD PGE; 2.00A {Homo sapiens} PDB: 4gur_A* 4gus_A* 4guu_A* 4fwe_A* 4fwf_A* 4fwj_A* 4gu1_A*
Probab=95.99 E-value=0.056 Score=54.20 Aligned_cols=35 Identities=17% Similarity=0.217 Sum_probs=28.5
Q ss_pred CcEEEcCe-EEEEeC--C--eEEecCCcEEeccEEEEecC
Q 018704 298 GVRLVRGI-VKDVDS--Q--KLILNDGTEVPYGLLVWSTG 332 (351)
Q Consensus 298 gV~~~~~~-v~~v~~--~--~v~~~~g~~~~~D~vi~a~G 332 (351)
|++++.++ |++++. + .|++.+|+++.+|.||+|+.
T Consensus 543 gl~I~l~t~V~~I~~~~~~v~V~~~~G~~i~Ad~VIvA~P 582 (776)
T 4gut_A 543 GLDIQLKSPVQCIDYSGDEVQVTTTDGTGYSAQKVLVTVP 582 (776)
T ss_dssp TSCEESSCCEEEEECSSSSEEEEETTCCEEEESEEEECCC
T ss_pred CCcEEcCCeeEEEEEcCCEEEEEECCCcEEEcCEEEECCC
Confidence 67899995 999874 2 45667888899999999995
No 367
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=95.94 E-value=0.0055 Score=47.31 Aligned_cols=33 Identities=21% Similarity=0.321 Sum_probs=30.6
Q ss_pred CcEEEECCchhHHHHHHhhhccCceEEEEcCCC
Q 018704 63 PRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRN 95 (351)
Q Consensus 63 ~~VvIIG~G~aGl~aA~~L~~~g~~v~vie~~~ 95 (351)
.+|+|+|+|..|...|..|.+.|++|+++|+++
T Consensus 7 ~~v~I~G~G~iG~~~a~~l~~~g~~v~~~d~~~ 39 (144)
T 2hmt_A 7 KQFAVIGLGRFGGSIVKELHRMGHEVLAVDINE 39 (144)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCCEEEESCH
T ss_pred CcEEEECCCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 579999999999999999999999999999854
No 368
>1chu_A Protein (L-aspartate oxidase); flavoenzyme, NAD biosynthesis, FAD, oxidoreductase; 2.20A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1knr_A* 1knp_A*
Probab=95.94 E-value=0.015 Score=55.92 Aligned_cols=31 Identities=19% Similarity=0.481 Sum_probs=26.9
Q ss_pred eEEEECCChHHHHHHHHHHHHHHHHHHhhhcCCCCccEEEEEeCCC
Q 018704 232 HCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANE 277 (351)
Q Consensus 232 ~v~VvGgG~~a~e~a~~l~~~~~~~~~~~~~~~~~~~~v~~~~~~~ 277 (351)
.|+|||||.+|+-.|..+++ + .+|.++++..
T Consensus 10 DVvVVG~G~AGl~aAl~la~-G--------------~~V~vlEk~~ 40 (540)
T 1chu_A 10 DVLIIGSGAAGLSLALRLAD-Q--------------HQVIVLSKGP 40 (540)
T ss_dssp SEEEECCSHHHHHHHHHHTT-T--------------SCEEEECSSC
T ss_pred CEEEECccHHHHHHHHHHhc-C--------------CcEEEEECCC
Confidence 79999999999999999987 6 7788887753
No 369
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=95.91 E-value=0.0051 Score=52.46 Aligned_cols=32 Identities=19% Similarity=0.311 Sum_probs=29.7
Q ss_pred eEEEECCChHHHHHHHHHHHHHHHHHHhhhcCCCCccEEEEEeCCC
Q 018704 232 HCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANE 277 (351)
Q Consensus 232 ~v~VvGgG~~a~e~a~~l~~~~~~~~~~~~~~~~~~~~v~~~~~~~ 277 (351)
.|+|||||++|+-+|..|++.| .+|+++++++
T Consensus 4 dV~IIGaGpaGL~aA~~La~~G--------------~~V~v~Ek~~ 35 (336)
T 3kkj_A 4 PIAIIGTGIAGLSAAQALTAAG--------------HQVHLFDKSR 35 (336)
T ss_dssp CEEEECCSHHHHHHHHHHHHTT--------------CCEEEECSSS
T ss_pred CEEEECcCHHHHHHHHHHHHCC--------------CCEEEEECCC
Confidence 7999999999999999999987 9999999864
No 370
>1kf6_A Fumarate reductase flavoprotein; respiration, fumarate reductace, succinate dehydrogenase, CO quinol, quinone, oxidoreductase; HET: FAD HQO CE1 1PE; 2.70A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1kfy_A* 1l0v_A* 2b76_A* 3cir_A* 3p4p_A* 3p4q_A* 3p4r_A* 3p4s_A*
Probab=95.90 E-value=0.033 Score=54.27 Aligned_cols=51 Identities=18% Similarity=0.153 Sum_probs=35.3
Q ss_pred HHHHHHHHhhhcC-cEEEcCe-EEEEe--CC---eEEe---cCCc--EEeccEEEEecCCCCc
Q 018704 286 LRHYATTQLSKSG-VRLVRGI-VKDVD--SQ---KLIL---NDGT--EVPYGLLVWSTGVGPS 336 (351)
Q Consensus 286 ~~~~~~~~l~~~g-V~~~~~~-v~~v~--~~---~v~~---~~g~--~~~~D~vi~a~G~~p~ 336 (351)
+...+.+.+.+.| |+++.+. |+++. ++ ++.. .+|+ .+.+|.||+|+|-...
T Consensus 136 l~~~L~~~~~~~gnv~i~~~~~v~~l~~~~g~v~Gv~~~~~~~G~~~~i~A~~VVlAtGg~s~ 198 (602)
T 1kf6_A 136 MLHTLFQTSLQFPQIQRFDEHFVLDILVDDGHVRGLVAMNMMEGTLVQIRANAVVMATGGAGR 198 (602)
T ss_dssp HHHHHHHHHTTCTTEEEEETEEEEEEEEETTEEEEEEEEETTTTEEEEEECSCEEECCCCCGG
T ss_pred HHHHHHHHHHhCCCcEEEeCCEEEEEEEeCCEEEEEEEEEcCCCcEEEEEcCeEEECCCCCcc
Confidence 3344555566677 9999995 87774 33 3432 5676 6899999999997655
No 371
>3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae}
Probab=95.85 E-value=0.0075 Score=56.65 Aligned_cols=35 Identities=20% Similarity=0.145 Sum_probs=32.2
Q ss_pred CCCcEEEECCchhHHHHHHhhhccCceEEEEcCCC
Q 018704 61 EKPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRN 95 (351)
Q Consensus 61 ~~~~VvIIG~G~aGl~aA~~L~~~g~~v~vie~~~ 95 (351)
..++|+|||.|.+|+++|..|.+.|++|++.|.+.
T Consensus 8 ~~k~v~viG~G~sG~s~A~~l~~~G~~V~~~D~~~ 42 (451)
T 3lk7_A 8 ENKKVLVLGLARSGEAAARLLAKLGAIVTVNDGKP 42 (451)
T ss_dssp TTCEEEEECCTTTHHHHHHHHHHTTCEEEEEESSC
T ss_pred CCCEEEEEeeCHHHHHHHHHHHhCCCEEEEEeCCc
Confidence 34789999999999999999999999999999865
No 372
>2wdq_A Succinate dehydrogenase flavoprotein subunit; succinate dehydrogenase activity, cell inner membrane, trica acid cycle; HET: FAD HEM CBE; 2.40A {Escherichia coli} PDB: 1nen_A* 2acz_A* 1nek_A* 2wdr_A* 2wdv_A* 2wp9_A* 2ws3_A* 2wu2_A* 2wu5_A*
Probab=95.84 E-value=0.059 Score=52.33 Aligned_cols=50 Identities=16% Similarity=0.017 Sum_probs=34.6
Q ss_pred HHHHHHHhhhcCcEEEcCe-EEEEeC---C---eEEe---cCCc--EEeccEEEEecCCCCc
Q 018704 287 RHYATTQLSKSGVRLVRGI-VKDVDS---Q---KLIL---NDGT--EVPYGLLVWSTGVGPS 336 (351)
Q Consensus 287 ~~~~~~~l~~~gV~~~~~~-v~~v~~---~---~v~~---~~g~--~~~~D~vi~a~G~~p~ 336 (351)
...+.+.+++.||+++.+. |+++.. + +|.. .+|+ .+.+|.||+|+|-...
T Consensus 146 ~~~L~~~~~~~gv~i~~~~~v~~L~~~~~g~v~Gv~~~~~~~g~~~~i~A~~VVlAtGg~~~ 207 (588)
T 2wdq_A 146 LHTLYQQNLKNHTTIFSEWYALDLVKNQDGAVVGCTALCIETGEVVYFKARATVLATGGAGR 207 (588)
T ss_dssp HHHHHHHHHHTTCEEEETEEEEEEEECTTSCEEEEEEEETTTCCEEEEEEEEEEECCCCCGG
T ss_pred HHHHHHHHHhCCCEEEeCcEEEEEEECCCCEEEEEEEEEcCCCeEEEEEcCEEEECCCCCcc
Confidence 3345555667799999995 888742 2 3443 4565 5889999999997654
No 373
>1kyq_A Met8P, siroheme biosynthesis protein Met8; homodimer, oxidoreductase, lyase; HET: NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.2.1.11 e.37.1.1
Probab=95.73 E-value=0.0066 Score=52.78 Aligned_cols=34 Identities=21% Similarity=0.325 Sum_probs=31.7
Q ss_pred CCcEEEECCchhHHHHHHhhhccCceEEEEcCCC
Q 018704 62 KPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRN 95 (351)
Q Consensus 62 ~~~VvIIG~G~aGl~aA~~L~~~g~~v~vie~~~ 95 (351)
.++|+|||||..|+..|..|.+.|.+|+|++++.
T Consensus 13 ~k~VLVVGgG~va~rka~~Ll~~Ga~VtViap~~ 46 (274)
T 1kyq_A 13 DKRILLIGGGEVGLTRLYKLMPTGCKLTLVSPDL 46 (274)
T ss_dssp TCEEEEEEESHHHHHHHHHHGGGTCEEEEEEEEE
T ss_pred CCEEEEECCcHHHHHHHHHHHhCCCEEEEEcCCC
Confidence 4789999999999999999999999999999854
No 374
>3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae}
Probab=95.66 E-value=0.0097 Score=55.90 Aligned_cols=86 Identities=17% Similarity=0.254 Sum_probs=59.6
Q ss_pred ccCeEEEECCChHHHHHHHHHHHHHHHHHHhhhcCCCCccEEEEEeCCCCCCCCcHHHHHHHHHHhhhcCcEEEcCeE-E
Q 018704 229 RLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEILSSFDDRLRHYATTQLSKSGVRLVRGIV-K 307 (351)
Q Consensus 229 ~~~~v~VvGgG~~a~e~a~~l~~~~~~~~~~~~~~~~~~~~v~~~~~~~~l~~~~~~~~~~~~~~l~~~gV~~~~~~v-~ 307 (351)
.+|+|.|||.|.+|+-+|..|.+.| .+|+..+.+... .+ ...+.|++.||+++.|.- .
T Consensus 8 ~~k~v~viG~G~sG~s~A~~l~~~G--------------~~V~~~D~~~~~--~~-----~~~~~L~~~gi~~~~g~~~~ 66 (451)
T 3lk7_A 8 ENKKVLVLGLARSGEAAARLLAKLG--------------AIVTVNDGKPFD--EN-----PTAQSLLEEGIKVVCGSHPL 66 (451)
T ss_dssp TTCEEEEECCTTTHHHHHHHHHHTT--------------CEEEEEESSCGG--GC-----HHHHHHHHTTCEEEESCCCG
T ss_pred CCCEEEEEeeCHHHHHHHHHHHhCC--------------CEEEEEeCCccc--CC-----hHHHHHHhCCCEEEECCChH
Confidence 3469999999999999999999887 899999985321 01 123466778999887631 1
Q ss_pred EEeCCeEEecCCcEEeccEEEEecCCCCc-ccc---ccCCCC
Q 018704 308 DVDSQKLILNDGTEVPYGLLVWSTGVGPS-TLV---KSLDLP 345 (351)
Q Consensus 308 ~v~~~~v~~~~g~~~~~D~vi~a~G~~p~-~~~---~~~gl~ 345 (351)
.+ + ++ .+|.||+++|..++ +.+ ++.|++
T Consensus 67 ~~------~-~~---~~d~vv~spgi~~~~p~~~~a~~~gi~ 98 (451)
T 3lk7_A 67 EL------L-DE---DFCYMIKNPGIPYNNPMVKKALEKQIP 98 (451)
T ss_dssp GG------G-GS---CEEEEEECTTSCTTSHHHHHHHHTTCC
T ss_pred Hh------h-cC---CCCEEEECCcCCCCChhHHHHHHCCCc
Confidence 00 0 00 28999999999887 443 344554
No 375
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=95.65 E-value=0.0068 Score=50.83 Aligned_cols=34 Identities=18% Similarity=0.351 Sum_probs=31.2
Q ss_pred CcEEEECCchhHHHHHHhhhccCceEEEEcCCCc
Q 018704 63 PRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRNH 96 (351)
Q Consensus 63 ~~VvIIG~G~aGl~aA~~L~~~g~~v~vie~~~~ 96 (351)
++|+|||+|..|...|..|.+.|++|+++|+++.
T Consensus 1 M~iiIiG~G~~G~~la~~L~~~g~~v~vid~~~~ 34 (218)
T 3l4b_C 1 MKVIIIGGETTAYYLARSMLSRKYGVVIINKDRE 34 (218)
T ss_dssp CCEEEECCHHHHHHHHHHHHHTTCCEEEEESCHH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCeEEEEECCHH
Confidence 3699999999999999999999999999998654
No 376
>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}
Probab=95.62 E-value=0.011 Score=54.28 Aligned_cols=36 Identities=19% Similarity=0.221 Sum_probs=32.8
Q ss_pred CCCcEEEECCchhHHHHHHhhhccCceEEEEcCCCc
Q 018704 61 EKPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRNH 96 (351)
Q Consensus 61 ~~~~VvIIG~G~aGl~aA~~L~~~g~~v~vie~~~~ 96 (351)
...+|+|||+|.+|+.+|..|...|.+|+++|+.+.
T Consensus 189 ~~~kV~ViG~G~iG~~aa~~a~~lGa~V~v~D~~~~ 224 (405)
T 4dio_A 189 PAAKIFVMGAGVAGLQAIATARRLGAVVSATDVRPA 224 (405)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSTT
T ss_pred CCCEEEEECCcHHHHHHHHHHHHCCCEEEEEcCCHH
Confidence 347899999999999999999999999999998764
No 377
>2x5o_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; ATP-binding, cell cycle, cell division, cell shape, cell WAL biogenesis/degradation; HET: KCX VSV; 1.46A {Escherichia coli} PDB: 2wjp_A* 2xpc_A* 2y1o_A* 2jff_A* 2jfh_A* 2uuo_A* 2uup_A* 2vtd_A* 2vte_A* 2jfg_A* 2y66_A* 2y67_A* 2y68_A* 4uag_A* 1e0d_A* 1uag_A* 1eeh_A* 3uag_A* 2uag_A*
Probab=95.57 E-value=0.0075 Score=56.43 Aligned_cols=35 Identities=17% Similarity=0.146 Sum_probs=31.9
Q ss_pred CCcEEEECCchhHHHHHHhhhccCceEEEEcCCCc
Q 018704 62 KPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRNH 96 (351)
Q Consensus 62 ~~~VvIIG~G~aGl~aA~~L~~~g~~v~vie~~~~ 96 (351)
.++|+|||.|.+|+++|..|.++|++|+++|.+..
T Consensus 5 ~~~v~viG~G~~G~~~a~~l~~~G~~v~~~D~~~~ 39 (439)
T 2x5o_A 5 GKNVVIIGLGLTGLSCVDFFLARGVTPRVMDTRMT 39 (439)
T ss_dssp TCCEEEECCHHHHHHHHHHHHTTTCCCEEEESSSS
T ss_pred CCEEEEEeecHHHHHHHHHHHhCCCEEEEEECCCC
Confidence 36899999999999999999999999999997654
No 378
>1pn0_A Phenol 2-monooxygenase; two dimers, TLS refinement, oxidoreductase; HET: FAD; 1.70A {Trichosporon cutaneum} SCOP: c.3.1.2 c.47.1.10 d.16.1.2 PDB: 1foh_A*
Probab=95.54 E-value=0.057 Score=53.26 Aligned_cols=20 Identities=35% Similarity=0.697 Sum_probs=19.2
Q ss_pred eEEEECCChHHHHHHHHHHH
Q 018704 232 HCVVVGGGPTGVEFSGELSD 251 (351)
Q Consensus 232 ~v~VvGgG~~a~e~a~~l~~ 251 (351)
.|+|||||++|+-+|..|++
T Consensus 10 dVlIVGaGpaGL~lA~~La~ 29 (665)
T 1pn0_A 10 DVLIVGAGPAGLMAARVLSE 29 (665)
T ss_dssp EEEEECCSHHHHHHHHHHHH
T ss_pred cEEEECcCHHHHHHHHHHhc
Confidence 79999999999999999998
No 379
>3eag_A UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-ME diaminopimelate ligase; UDP-N-acetylmuramate:L-alanyl-G glutamyl-MESO-diaminopimelate ligase; 2.55A {Neisseria meningitidis MC58}
Probab=95.45 E-value=0.02 Score=51.21 Aligned_cols=83 Identities=20% Similarity=0.257 Sum_probs=57.6
Q ss_pred cCeEEEECCChHHHH-HHHHHHHHHHHHHHhhhcCCCCccEEEEEeCCCCCCCCcHHHHHHHHHHhhhcCcEEEcCe-EE
Q 018704 230 LLHCVVVGGGPTGVE-FSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEILSSFDDRLRHYATTQLSKSGVRLVRGI-VK 307 (351)
Q Consensus 230 ~~~v~VvGgG~~a~e-~a~~l~~~~~~~~~~~~~~~~~~~~v~~~~~~~~l~~~~~~~~~~~~~~l~~~gV~~~~~~-v~ 307 (351)
.+++.|||.|.+|+- +|..|.+.| .+|+..+..... + ..+.|++.||+++.|. ..
T Consensus 4 ~~~i~~iGiGg~Gms~~A~~L~~~G--------------~~V~~~D~~~~~----~-----~~~~L~~~gi~v~~g~~~~ 60 (326)
T 3eag_A 4 MKHIHIIGIGGTFMGGLAAIAKEAG--------------FEVSGCDAKMYP----P-----MSTQLEALGIDVYEGFDAA 60 (326)
T ss_dssp CCEEEEESCCSHHHHHHHHHHHHTT--------------CEEEEEESSCCT----T-----HHHHHHHTTCEEEESCCGG
T ss_pred CcEEEEEEECHHHHHHHHHHHHhCC--------------CEEEEEcCCCCc----H-----HHHHHHhCCCEEECCCCHH
Confidence 359999999999996 888888887 899999986421 1 2345667799887652 11
Q ss_pred EEeCCeEEecCCcEEeccEEEEecCCCCc-ccc---ccCCCC
Q 018704 308 DVDSQKLILNDGTEVPYGLLVWSTGVGPS-TLV---KSLDLP 345 (351)
Q Consensus 308 ~v~~~~v~~~~g~~~~~D~vi~a~G~~p~-~~~---~~~gl~ 345 (351)
. +.. ..+|.||+++|..++ +.+ ++.|++
T Consensus 61 ~-------l~~---~~~d~vV~Spgi~~~~p~~~~a~~~gi~ 92 (326)
T 3eag_A 61 Q-------LDE---FKADVYVIGNVAKRGMDVVEAILNLGLP 92 (326)
T ss_dssp G-------GGS---CCCSEEEECTTCCTTCHHHHHHHHTTCC
T ss_pred H-------cCC---CCCCEEEECCCcCCCCHHHHHHHHcCCc
Confidence 0 000 148999999999887 544 334554
No 380
>2h88_A Succinate dehydrogenase flavoprotein subunit; complex II, membrane protein, heme protein, iron sulfur PROT cytochrome B, oxidoreductase; HET: FAD BHG HEM UNL; 1.74A {Gallus gallus} PDB: 1yq4_A* 1yq3_A* 2fbw_A* 2h89_A* 2wqy_A* 1zoy_A* 1zp0_A* 3abv_A* 3ae1_A* 3ae2_A* 3ae3_A* 3ae4_A* 3ae5_A* 3ae6_A* 3ae7_A* 3ae8_A* 3ae9_A* 3aea_A* 3aeb_A* 3aec_A* ...
Probab=95.41 E-value=0.073 Score=51.99 Aligned_cols=50 Identities=18% Similarity=0.040 Sum_probs=34.0
Q ss_pred HHHHHHHhhhcCcEEEcCe-EEEEe--CC---eEEe---cCCc--EEeccEEEEecCCCCc
Q 018704 287 RHYATTQLSKSGVRLVRGI-VKDVD--SQ---KLIL---NDGT--EVPYGLLVWSTGVGPS 336 (351)
Q Consensus 287 ~~~~~~~l~~~gV~~~~~~-v~~v~--~~---~v~~---~~g~--~~~~D~vi~a~G~~p~ 336 (351)
...+.+.+.+.||+++.+. |.++. ++ +|.. .+|+ .+.++.||+|||-...
T Consensus 158 ~~~L~~~~~~~gv~i~~~~~v~~Li~~~g~v~Gv~~~~~~~G~~~~i~A~~VVlATGG~~~ 218 (621)
T 2h88_A 158 LHTLYGRSLRYDTSYFVEYFALDLLMENGECRGVIALCIEDGTIHRFRAKNTVIATGGYGR 218 (621)
T ss_dssp HHHHHHHHTTSCCEEEETEEEEEEEEETTEEEEEEEEETTTCCEEEEEEEEEEECCCCCGG
T ss_pred HHHHHHHHHhCCCEEEEceEEEEEEEECCEEEEEEEEEcCCCcEEEEEcCeEEECCCcccc
Confidence 3344445556789999985 77764 23 3444 3565 5889999999997654
No 381
>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}
Probab=95.38 E-value=0.013 Score=53.37 Aligned_cols=36 Identities=19% Similarity=0.185 Sum_probs=32.8
Q ss_pred CCCcEEEECCchhHHHHHHhhhccCceEEEEcCCCc
Q 018704 61 EKPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRNH 96 (351)
Q Consensus 61 ~~~~VvIIG~G~aGl~aA~~L~~~g~~v~vie~~~~ 96 (351)
...+|+|||+|.+|+.+|..|...|.+|+++|+++.
T Consensus 183 ~~~kV~ViG~G~iG~~aa~~a~~lGa~V~v~D~~~~ 218 (381)
T 3p2y_A 183 KPASALVLGVGVAGLQALATAKRLGAKTTGYDVRPE 218 (381)
T ss_dssp CCCEEEEESCSHHHHHHHHHHHHHTCEEEEECSSGG
T ss_pred CCCEEEEECchHHHHHHHHHHHHCCCEEEEEeCCHH
Confidence 357899999999999999999999999999998754
No 382
>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*
Probab=95.35 E-value=0.017 Score=51.04 Aligned_cols=34 Identities=24% Similarity=0.322 Sum_probs=31.6
Q ss_pred CcEEEECCchhHHHHHHhhhccCceEEEEcCCCc
Q 018704 63 PRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRNH 96 (351)
Q Consensus 63 ~~VvIIG~G~aGl~aA~~L~~~g~~v~vie~~~~ 96 (351)
.+|.|||+|..|...|..|++.|++|+++|+++.
T Consensus 16 ~~I~VIG~G~mG~~iA~~la~~G~~V~~~d~~~~ 49 (302)
T 1f0y_A 16 KHVTVIGGGLMGAGIAQVAAATGHTVVLVDQTED 49 (302)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCeEEEEECCHH
Confidence 5799999999999999999999999999998754
No 383
>3i83_A 2-dehydropantoate 2-reductase; structural genomics, oxidoreductase, NADP, pantothenate BIOS PSI-2, protein structure initiative; 1.90A {Methylococcus capsulatus}
Probab=95.27 E-value=0.015 Score=51.81 Aligned_cols=33 Identities=21% Similarity=0.184 Sum_probs=31.2
Q ss_pred CcEEEECCchhHHHHHHhhhccCceEEEEcCCC
Q 018704 63 PRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRN 95 (351)
Q Consensus 63 ~~VvIIG~G~aGl~aA~~L~~~g~~v~vie~~~ 95 (351)
++|+|||+|..|.+.|..|++.|.+|+++++++
T Consensus 3 mkI~IiGaGaiG~~~a~~L~~~g~~V~~~~r~~ 35 (320)
T 3i83_A 3 LNILVIGTGAIGSFYGALLAKTGHCVSVVSRSD 35 (320)
T ss_dssp CEEEEESCCHHHHHHHHHHHHTTCEEEEECSTT
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCeEEEEeCCh
Confidence 689999999999999999999999999999865
No 384
>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}
Probab=95.23 E-value=0.015 Score=45.11 Aligned_cols=35 Identities=11% Similarity=0.261 Sum_probs=31.5
Q ss_pred CCcEEEECCchhHHHHHHhhhccCceEEEEcCCCc
Q 018704 62 KPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRNH 96 (351)
Q Consensus 62 ~~~VvIIG~G~aGl~aA~~L~~~g~~v~vie~~~~ 96 (351)
..+|+|||+|..|...|..|.+.|++|+++++...
T Consensus 21 ~~~v~iiG~G~iG~~~a~~l~~~g~~v~v~~r~~~ 55 (144)
T 3oj0_A 21 GNKILLVGNGMLASEIAPYFSYPQYKVTVAGRNID 55 (144)
T ss_dssp CCEEEEECCSHHHHHHGGGCCTTTCEEEEEESCHH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCEEEEEcCCHH
Confidence 46899999999999999999999999999998643
No 385
>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*
Probab=95.15 E-value=0.018 Score=50.34 Aligned_cols=35 Identities=20% Similarity=0.240 Sum_probs=32.2
Q ss_pred CCcEEEECCchhHHHHHHhhhccCceEEEEcCCCc
Q 018704 62 KPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRNH 96 (351)
Q Consensus 62 ~~~VvIIG~G~aGl~aA~~L~~~g~~v~vie~~~~ 96 (351)
..+|.|||+|..|...|..|++.|++|+++|+++.
T Consensus 4 ~~kV~VIGaG~mG~~iA~~la~~G~~V~l~d~~~~ 38 (283)
T 4e12_A 4 ITNVTVLGTGVLGSQIAFQTAFHGFAVTAYDINTD 38 (283)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSHH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCeEEEEeCCHH
Confidence 36899999999999999999999999999998754
No 386
>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}
Probab=95.06 E-value=0.023 Score=50.41 Aligned_cols=37 Identities=16% Similarity=0.117 Sum_probs=33.1
Q ss_pred CCCCcEEEECCchhHHHHHHhhhccCceEEEEcCCCc
Q 018704 60 NEKPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRNH 96 (351)
Q Consensus 60 ~~~~~VvIIG~G~aGl~aA~~L~~~g~~v~vie~~~~ 96 (351)
...++|.|||.|..|...|..|++.|++|+++|+++.
T Consensus 19 ~~m~~I~iIG~G~mG~~~A~~l~~~G~~V~~~dr~~~ 55 (310)
T 3doj_A 19 SHMMEVGFLGLGIMGKAMSMNLLKNGFKVTVWNRTLS 55 (310)
T ss_dssp CCSCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSGG
T ss_pred ccCCEEEEECccHHHHHHHHHHHHCCCeEEEEeCCHH
Confidence 3447899999999999999999999999999998654
No 387
>3vtf_A UDP-glucose 6-dehydrogenase; two discrete alpha/beta domains, oxidoreducta; HET: UPG; 2.00A {Pyrobaculum islandicum}
Probab=94.99 E-value=0.024 Score=52.67 Aligned_cols=35 Identities=23% Similarity=0.208 Sum_probs=31.7
Q ss_pred CCCcEEEECCchhHHHHHHhhhccCceEEEEcCCC
Q 018704 61 EKPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRN 95 (351)
Q Consensus 61 ~~~~VvIIG~G~aGl~aA~~L~~~g~~v~vie~~~ 95 (351)
.+.+|.|||.|..||..|..|++.|++|+.+|-++
T Consensus 20 ~m~~IaViGlGYVGLp~A~~~A~~G~~V~g~Did~ 54 (444)
T 3vtf_A 20 HMASLSVLGLGYVGVVHAVGFALLGHRVVGYDVNP 54 (444)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHTCEEEEECSCH
T ss_pred CCCEEEEEccCHHHHHHHHHHHhCCCcEEEEECCH
Confidence 45789999999999999999999999999999553
No 388
>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*
Probab=94.97 E-value=0.023 Score=52.45 Aligned_cols=35 Identities=23% Similarity=0.288 Sum_probs=32.2
Q ss_pred CCcEEEECCchhHHHHHHhhhccCceEEEEcCCCc
Q 018704 62 KPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRNH 96 (351)
Q Consensus 62 ~~~VvIIG~G~aGl~aA~~L~~~g~~v~vie~~~~ 96 (351)
..+|+|||+|.+|+.+|..+...|.+|+++|++..
T Consensus 172 g~~V~ViGaG~iG~~aa~~a~~~Ga~V~v~D~~~~ 206 (401)
T 1x13_A 172 PAKVMVIGAGVAGLAAIGAANSLGAIVRAFDTRPE 206 (401)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCGG
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCHH
Confidence 47899999999999999999999999999998654
No 389
>2a9f_A Putative malic enzyme ((S)-malate:NAD+ oxidoreductase (decarboxylating)); hypothetical protein, structural genomics, PSI; 2.50A {Streptococcus pyogenes}
Probab=94.93 E-value=0.019 Score=52.13 Aligned_cols=35 Identities=23% Similarity=0.273 Sum_probs=32.1
Q ss_pred CCCcEEEECCchhHHHHHHhhhccCc-eEEEEcCCC
Q 018704 61 EKPRVVVLGSGWAGCRLMKGIDTSLY-DVVCVSPRN 95 (351)
Q Consensus 61 ~~~~VvIIG~G~aGl~aA~~L~~~g~-~v~vie~~~ 95 (351)
...+|||+|||.||+.+|..|...|. +|+++|++.
T Consensus 187 ~d~kVVi~GAGaAG~~iA~ll~~~Ga~~I~v~D~~G 222 (398)
T 2a9f_A 187 DEVSIVVNGGGSAGLSITRKLLAAGATKVTVVDKFG 222 (398)
T ss_dssp TSCEEEEECCSHHHHHHHHHHHHHTCCEEEEEETTE
T ss_pred CccEEEEECCCHHHHHHHHHHHHcCCCeEEEEECCC
Confidence 45799999999999999999999999 899999874
No 390
>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}
Probab=94.92 E-value=0.019 Score=53.79 Aligned_cols=34 Identities=18% Similarity=0.312 Sum_probs=31.6
Q ss_pred CcEEEECCchhHHHHHHhhhccCceEEEEcCCCc
Q 018704 63 PRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRNH 96 (351)
Q Consensus 63 ~~VvIIG~G~aGl~aA~~L~~~g~~v~vie~~~~ 96 (351)
++|.|||+|..|+..|..|++.|++|+++|+++.
T Consensus 3 mkI~VIG~G~vG~~lA~~La~~G~~V~~~D~~~~ 36 (450)
T 3gg2_A 3 LDIAVVGIGYVGLVSATCFAELGANVRCIDTDRN 36 (450)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHH
T ss_pred CEEEEECcCHHHHHHHHHHHhcCCEEEEEECCHH
Confidence 5899999999999999999999999999998753
No 391
>3hn2_A 2-dehydropantoate 2-reductase; PSI-2, NYSGXRC, structural GE protein structure initiative; 2.50A {Geobacter metallireducens}
Probab=94.89 E-value=0.018 Score=51.11 Aligned_cols=33 Identities=24% Similarity=0.250 Sum_probs=30.3
Q ss_pred CcEEEECCchhHHHHHHhhhccCceEEEEcCCC
Q 018704 63 PRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRN 95 (351)
Q Consensus 63 ~~VvIIG~G~aGl~aA~~L~~~g~~v~vie~~~ 95 (351)
++|+|||+|..|.+.|..|++.|.+|+++++++
T Consensus 3 mkI~IiGaGaiG~~~a~~L~~~g~~V~~~~r~~ 35 (312)
T 3hn2_A 3 LRIAIVGAGALGLYYGALLQRSGEDVHFLLRRD 35 (312)
T ss_dssp -CEEEECCSTTHHHHHHHHHHTSCCEEEECSTT
T ss_pred CEEEEECcCHHHHHHHHHHHHCCCeEEEEEcCc
Confidence 689999999999999999999999999999854
No 392
>3ado_A Lambda-crystallin; L-gulonate 3-dehydrogenase, structural genomics, riken struc genomics/proteomics initiative, RSGI, acetylation; 1.70A {Oryctolagus cuniculus} PDB: 3adp_A* 3f3s_A*
Probab=94.87 E-value=0.019 Score=51.05 Aligned_cols=34 Identities=18% Similarity=0.199 Sum_probs=31.8
Q ss_pred CcEEEECCchhHHHHHHhhhccCceEEEEcCCCc
Q 018704 63 PRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRNH 96 (351)
Q Consensus 63 ~~VvIIG~G~aGl~aA~~L~~~g~~v~vie~~~~ 96 (351)
.+|.|||+|.-|-..|..++..|++|+++|.++.
T Consensus 7 ~~VaViGaG~MG~giA~~~a~~G~~V~l~D~~~~ 40 (319)
T 3ado_A 7 GDVLIVGSGLVGRSWAMLFASGGFRVKLYDIEPR 40 (319)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCEEEECSCHH
T ss_pred CeEEEECCcHHHHHHHHHHHhCCCeEEEEECCHH
Confidence 5899999999999999999999999999998754
No 393
>4ffl_A PYLC; amino acid, biosynthesis of pyrrolysine, isopeptide bond for ATP-grAsp fold, ligase, ATP-binding, L-lysine and 3R-methyl ornithine; HET: LYS ADP ATP; 1.50A {Methanosarcina barkeri} PDB: 4ffm_A* 4ffn_A* 4ffo_A* 4ffp_A* 4ffr_A*
Probab=94.81 E-value=0.025 Score=51.32 Aligned_cols=34 Identities=15% Similarity=0.136 Sum_probs=31.4
Q ss_pred CcEEEECCchhHHHHHHhhhccCceEEEEcCCCc
Q 018704 63 PRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRNH 96 (351)
Q Consensus 63 ~~VvIIG~G~aGl~aA~~L~~~g~~v~vie~~~~ 96 (351)
++|+|||||..|..+|+.+++.|++|+++|+++.
T Consensus 2 K~I~ilGgg~~g~~~~~~Ak~~G~~vv~vd~~~~ 35 (363)
T 4ffl_A 2 KTICLVGGKLQGFEAAYLSKKAGMKVVLVDKNPQ 35 (363)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESCTT
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCCC
Confidence 6899999999999999999999999999997654
No 394
>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*
Probab=94.74 E-value=0.029 Score=51.44 Aligned_cols=36 Identities=25% Similarity=0.266 Sum_probs=32.5
Q ss_pred CCCcEEEECCchhHHHHHHhhhccCceEEEEcCCCc
Q 018704 61 EKPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRNH 96 (351)
Q Consensus 61 ~~~~VvIIG~G~aGl~aA~~L~~~g~~v~vie~~~~ 96 (351)
...+|+|||+|.+|+.+|..+...|.+|+++|+.+.
T Consensus 171 ~g~~V~ViGaG~iG~~aa~~a~~~Ga~V~~~d~~~~ 206 (384)
T 1l7d_A 171 PPARVLVFGVGVAGLQAIATAKRLGAVVMATDVRAA 206 (384)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCST
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHH
Confidence 357899999999999999999999999999998653
No 395
>3eag_A UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-ME diaminopimelate ligase; UDP-N-acetylmuramate:L-alanyl-G glutamyl-MESO-diaminopimelate ligase; 2.55A {Neisseria meningitidis MC58}
Probab=94.72 E-value=0.027 Score=50.38 Aligned_cols=36 Identities=11% Similarity=0.081 Sum_probs=31.6
Q ss_pred CCCcEEEECCchhHHH-HHHhhhccCceEEEEcCCCc
Q 018704 61 EKPRVVVLGSGWAGCR-LMKGIDTSLYDVVCVSPRNH 96 (351)
Q Consensus 61 ~~~~VvIIG~G~aGl~-aA~~L~~~g~~v~vie~~~~ 96 (351)
..++|.|||.|.+|++ +|..|.+.|++|++.|.+..
T Consensus 3 ~~~~i~~iGiGg~Gms~~A~~L~~~G~~V~~~D~~~~ 39 (326)
T 3eag_A 3 AMKHIHIIGIGGTFMGGLAAIAKEAGFEVSGCDAKMY 39 (326)
T ss_dssp CCCEEEEESCCSHHHHHHHHHHHHTTCEEEEEESSCC
T ss_pred CCcEEEEEEECHHHHHHHHHHHHhCCCEEEEEcCCCC
Confidence 3478999999999996 78899999999999998653
No 396
>1lld_A L-lactate dehydrogenase; oxidoreductase(CHOH (D)-NAD (A)); HET: NAD; 2.00A {Bifidobacterium longum subsp} SCOP: c.2.1.5 d.162.1.1 PDB: 1lth_T*
Probab=94.70 E-value=0.028 Score=50.03 Aligned_cols=34 Identities=18% Similarity=0.253 Sum_probs=31.3
Q ss_pred CCcEEEECCchhHHHHHHhhhccCc--eEEEEcCCC
Q 018704 62 KPRVVVLGSGWAGCRLMKGIDTSLY--DVVCVSPRN 95 (351)
Q Consensus 62 ~~~VvIIG~G~aGl~aA~~L~~~g~--~v~vie~~~ 95 (351)
.++|+|||+|..|.+.|..|++.|+ +|+++|++.
T Consensus 7 ~mkI~IiGaG~vG~~~a~~l~~~g~~~~V~l~d~~~ 42 (319)
T 1lld_A 7 PTKLAVIGAGAVGSTLAFAAAQRGIAREIVLEDIAK 42 (319)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCCh
Confidence 3689999999999999999999998 999999865
No 397
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=94.68 E-value=0.024 Score=50.11 Aligned_cols=34 Identities=21% Similarity=0.259 Sum_probs=31.3
Q ss_pred CcEEEECCchhHHHHHHhhhccCceEEEEcCCCc
Q 018704 63 PRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRNH 96 (351)
Q Consensus 63 ~~VvIIG~G~aGl~aA~~L~~~g~~v~vie~~~~ 96 (351)
++|.|||+|..|...|..|.+.|++|+++++++.
T Consensus 4 m~i~iiG~G~~G~~~a~~l~~~g~~V~~~~r~~~ 37 (316)
T 2ew2_A 4 MKIAIAGAGAMGSRLGIMLHQGGNDVTLIDQWPA 37 (316)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHH
T ss_pred CeEEEECcCHHHHHHHHHHHhCCCcEEEEECCHH
Confidence 5899999999999999999999999999998653
No 398
>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1}
Probab=94.65 E-value=0.032 Score=46.38 Aligned_cols=35 Identities=11% Similarity=0.259 Sum_probs=31.6
Q ss_pred CCcEEEECCchhHHHHHHhhhccCceEEEEcCCCc
Q 018704 62 KPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRNH 96 (351)
Q Consensus 62 ~~~VvIIG~G~aGl~aA~~L~~~g~~v~vie~~~~ 96 (351)
.++|.|||+|..|.+.|..|.+.|++|+++++++.
T Consensus 19 ~~~I~iiG~G~mG~~la~~l~~~g~~V~~~~~~~~ 53 (209)
T 2raf_A 19 GMEITIFGKGNMGQAIGHNFEIAGHEVTYYGSKDQ 53 (209)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHTTCEEEEECTTCC
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCHH
Confidence 46899999999999999999999999999998654
No 399
>1pjq_A CYSG, siroheme synthase; rossman fold, nucleotide binding motif, SAM, NAD, phosphoserine, transferase/oxidoreductase/lyase complex; HET: SEP PGE SAH; 2.21A {Salmonella typhimurium} SCOP: c.2.1.11 c.90.1.1 e.37.1.1 PDB: 1pjs_A* 1pjt_A*
Probab=94.64 E-value=0.036 Score=52.06 Aligned_cols=74 Identities=20% Similarity=0.193 Sum_probs=50.4
Q ss_pred ccCeEEEECCChHHHHHHHHHHHHHHHHHHhhhcCCCCccEEEEEeCCCCCCCCcHHHHHHHHHHhhhcCcEEEcCeEEE
Q 018704 229 RLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEILSSFDDRLRHYATTQLSKSGVRLVRGIVKD 308 (351)
Q Consensus 229 ~~~~v~VvGgG~~a~e~a~~l~~~~~~~~~~~~~~~~~~~~v~~~~~~~~l~~~~~~~~~~~~~~l~~~gV~~~~~~v~~ 308 (351)
++++|+|||||.+|...+..|.+.| .+|+++... ..+++ .+...+.+++++.+...
T Consensus 11 ~~~~vlVvGgG~va~~k~~~L~~~g--------------a~V~vi~~~-----~~~~~----~~l~~~~~i~~~~~~~~- 66 (457)
T 1pjq_A 11 RDRDCLIVGGGDVAERKARLLLEAG--------------ARLTVNALT-----FIPQF----TVWANEGMLTLVEGPFD- 66 (457)
T ss_dssp BTCEEEEECCSHHHHHHHHHHHHTT--------------BEEEEEESS-----CCHHH----HHHHTTTSCEEEESSCC-
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCc--------------CEEEEEcCC-----CCHHH----HHHHhcCCEEEEECCCC-
Confidence 3469999999999999999999887 899999863 22232 33334456777654211
Q ss_pred EeCCeEEecCCcEEeccEEEEecCCCC
Q 018704 309 VDSQKLILNDGTEVPYGLLVWSTGVGP 335 (351)
Q Consensus 309 v~~~~v~~~~g~~~~~D~vi~a~G~~p 335 (351)
.+.--.+|.||.|||...
T Consensus 67 ---------~~~l~~~~lVi~at~~~~ 84 (457)
T 1pjq_A 67 ---------ETLLDSCWLAIAATDDDT 84 (457)
T ss_dssp ---------GGGGTTCSEEEECCSCHH
T ss_pred ---------ccccCCccEEEEcCCCHH
Confidence 111114889999998763
No 400
>2o3j_A UDP-glucose 6-dehydrogenase; structural genomics, PSI-2, prote structure initiative, NEW YORK SGX research center for STRU genomics; 1.88A {Caenorhabditis elegans}
Probab=94.57 E-value=0.028 Score=53.23 Aligned_cols=34 Identities=24% Similarity=0.322 Sum_probs=30.7
Q ss_pred CCcEEEECCchhHHHHHHhhhcc--CceEEEEcCCC
Q 018704 62 KPRVVVLGSGWAGCRLMKGIDTS--LYDVVCVSPRN 95 (351)
Q Consensus 62 ~~~VvIIG~G~aGl~aA~~L~~~--g~~v~vie~~~ 95 (351)
.++|.|||.|..|+..|..|++. |++|+++|+++
T Consensus 9 ~mkI~VIG~G~vG~~~A~~La~~g~g~~V~~~D~~~ 44 (481)
T 2o3j_A 9 VSKVVCVGAGYVGGPTCAMIAHKCPHITVTVVDMNT 44 (481)
T ss_dssp CCEEEEECCSTTHHHHHHHHHHHCTTSEEEEECSCH
T ss_pred CCEEEEECCCHHHHHHHHHHHhcCCCCEEEEEECCH
Confidence 46899999999999999999998 79999999754
No 401
>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*
Probab=94.56 E-value=0.029 Score=48.15 Aligned_cols=34 Identities=18% Similarity=0.343 Sum_probs=31.1
Q ss_pred CCcEEEECCchhHHHHHHhhhccCc-eEEEEcCCC
Q 018704 62 KPRVVVLGSGWAGCRLMKGIDTSLY-DVVCVSPRN 95 (351)
Q Consensus 62 ~~~VvIIG~G~aGl~aA~~L~~~g~-~v~vie~~~ 95 (351)
..+|+|||+|-.|..+|..|++.|. +++|+|++.
T Consensus 31 ~~~VlVvG~Gg~G~~va~~La~~Gv~~i~lvD~d~ 65 (249)
T 1jw9_B 31 DSRVLIVGLGGLGCAASQYLASAGVGNLTLLDFDT 65 (249)
T ss_dssp HCEEEEECCSHHHHHHHHHHHHHTCSEEEEECCCB
T ss_pred CCeEEEEeeCHHHHHHHHHHHHcCCCeEEEEcCCC
Confidence 3689999999999999999999998 799999865
No 402
>2ewd_A Lactate dehydrogenase,; protein-substrate_cofactor analog complex, oxidoreductase; HET: A3D; 2.00A {Cryptosporidium parvum} PDB: 2frm_A 2fn7_A* 2fnz_A* 2fm3_A
Probab=94.54 E-value=0.034 Score=49.48 Aligned_cols=35 Identities=23% Similarity=0.324 Sum_probs=31.7
Q ss_pred CCcEEEECCchhHHHHHHhhhccCc-eEEEEcCCCc
Q 018704 62 KPRVVVLGSGWAGCRLMKGIDTSLY-DVVCVSPRNH 96 (351)
Q Consensus 62 ~~~VvIIG~G~aGl~aA~~L~~~g~-~v~vie~~~~ 96 (351)
..+|+|||+|..|.+.|..|++.|+ +|+++|.++.
T Consensus 4 ~~kI~VIGaG~~G~~ia~~la~~g~~~V~l~D~~~~ 39 (317)
T 2ewd_A 4 RRKIAVIGSGQIGGNIAYIVGKDNLADVVLFDIAEG 39 (317)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCCEEEEECSSSS
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCceEEEEeCCch
Confidence 3689999999999999999999998 9999998654
No 403
>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}
Probab=94.54 E-value=0.028 Score=50.10 Aligned_cols=36 Identities=14% Similarity=0.225 Sum_probs=32.5
Q ss_pred CCCcEEEECCchhHHHHHHhhhccCceEEEEcCCCc
Q 018704 61 EKPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRNH 96 (351)
Q Consensus 61 ~~~~VvIIG~G~aGl~aA~~L~~~g~~v~vie~~~~ 96 (351)
..++|.|||.|..|...|..|.+.|++|+++|+++.
T Consensus 30 ~~~~I~iIG~G~mG~~~a~~l~~~G~~V~~~dr~~~ 65 (320)
T 4dll_A 30 YARKITFLGTGSMGLPMARRLCEAGYALQVWNRTPA 65 (320)
T ss_dssp CCSEEEEECCTTTHHHHHHHHHHTTCEEEEECSCHH
T ss_pred CCCEEEEECccHHHHHHHHHHHhCCCeEEEEcCCHH
Confidence 346899999999999999999999999999998653
No 404
>1vl6_A Malate oxidoreductase; TM0542, NAD-dependent malic enzyme, structural genomics, JCS protein structure initiative, PSI; 2.61A {Thermotoga maritima} SCOP: c.2.1.7 c.58.1.3 PDB: 2hae_A*
Probab=94.52 E-value=0.029 Score=50.93 Aligned_cols=34 Identities=35% Similarity=0.377 Sum_probs=31.6
Q ss_pred CCCcEEEECCchhHHHHHHhhhccCc-eEEEEcCC
Q 018704 61 EKPRVVVLGSGWAGCRLMKGIDTSLY-DVVCVSPR 94 (351)
Q Consensus 61 ~~~~VvIIG~G~aGl~aA~~L~~~g~-~v~vie~~ 94 (351)
...+|||+|+|.+|..+|..|...|. +|+++|++
T Consensus 191 ~~~kVVv~GAGaAG~~iAkll~~~G~~~I~v~Dr~ 225 (388)
T 1vl6_A 191 EEVKVVVNGIGAAGYNIVKFLLDLGVKNVVAVDRK 225 (388)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHHTCCEEEEEETT
T ss_pred CCcEEEEECCCHHHHHHHHHHHhCCCCeEEEEECC
Confidence 45799999999999999999999998 79999987
No 405
>2y0c_A BCEC, UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide, C fibrosis; HET: UGA; 1.75A {Burkholderia cepacia} PDB: 2y0d_A* 2y0e_A*
Probab=94.51 E-value=0.028 Score=53.15 Aligned_cols=34 Identities=21% Similarity=0.281 Sum_probs=31.5
Q ss_pred CCcEEEECCchhHHHHHHhhhccCceEEEEcCCC
Q 018704 62 KPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRN 95 (351)
Q Consensus 62 ~~~VvIIG~G~aGl~aA~~L~~~g~~v~vie~~~ 95 (351)
.++|.|||+|..|+..|..|++.|++|+++|.++
T Consensus 8 ~~~I~VIG~G~vG~~lA~~la~~G~~V~~~d~~~ 41 (478)
T 2y0c_A 8 SMNLTIIGSGSVGLVTGACLADIGHDVFCLDVDQ 41 (478)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CceEEEECcCHHHHHHHHHHHhCCCEEEEEECCH
Confidence 3789999999999999999999999999999764
No 406
>1ks9_A KPA reductase;, 2-dehydropantoate 2-reductase; PANE, APBA, ketopantoate reductase, rossman fold, monomer, APO, oxidoreductase; 1.70A {Escherichia coli} SCOP: a.100.1.7 c.2.1.6 PDB: 1yon_A* 1yjq_A* 2ofp_A*
Probab=94.51 E-value=0.034 Score=48.52 Aligned_cols=33 Identities=18% Similarity=0.154 Sum_probs=30.7
Q ss_pred cEEEECCchhHHHHHHhhhccCceEEEEcCCCc
Q 018704 64 RVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRNH 96 (351)
Q Consensus 64 ~VvIIG~G~aGl~aA~~L~~~g~~v~vie~~~~ 96 (351)
+|.|||+|..|.+.|..|.+.|++|+++++++.
T Consensus 2 ~i~iiG~G~~G~~~a~~l~~~g~~V~~~~r~~~ 34 (291)
T 1ks9_A 2 KITVLGCGALGQLWLTALCKQGHEVQGWLRVPQ 34 (291)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSSCC
T ss_pred eEEEECcCHHHHHHHHHHHhCCCCEEEEEcCcc
Confidence 699999999999999999999999999998754
No 407
>3ghy_A Ketopantoate reductase protein; oxidoreductase, NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 2.00A {Ralstonia solanacearum}
Probab=94.42 E-value=0.033 Score=49.98 Aligned_cols=32 Identities=16% Similarity=0.234 Sum_probs=30.4
Q ss_pred CcEEEECCchhHHHHHHhhhccCceEEEEcCC
Q 018704 63 PRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPR 94 (351)
Q Consensus 63 ~~VvIIG~G~aGl~aA~~L~~~g~~v~vie~~ 94 (351)
++|.|||+|..|.+.|..|++.|++|++++++
T Consensus 4 mkI~IiGaG~~G~~~a~~L~~~g~~V~~~~r~ 35 (335)
T 3ghy_A 4 TRICIVGAGAVGGYLGARLALAGEAINVLARG 35 (335)
T ss_dssp CCEEEESCCHHHHHHHHHHHHTTCCEEEECCH
T ss_pred CEEEEECcCHHHHHHHHHHHHCCCEEEEEECh
Confidence 68999999999999999999999999999984
No 408
>2dpo_A L-gulonate 3-dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Oryctolagus cuniculus} PDB: 2ep9_A* 3ado_A 3a97_A 3adp_A* 3f3s_A*
Probab=94.40 E-value=0.029 Score=50.03 Aligned_cols=35 Identities=17% Similarity=0.190 Sum_probs=31.9
Q ss_pred CCcEEEECCchhHHHHHHhhhccCceEEEEcCCCc
Q 018704 62 KPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRNH 96 (351)
Q Consensus 62 ~~~VvIIG~G~aGl~aA~~L~~~g~~v~vie~~~~ 96 (351)
..+|.|||+|.-|.+.|..|++.|++|+++|+++.
T Consensus 6 ~~kI~vIGaG~MG~~iA~~la~~G~~V~l~d~~~~ 40 (319)
T 2dpo_A 6 AGDVLIVGSGLVGRSWAMLFASGGFRVKLYDIEPR 40 (319)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHTTCCEEEECSCHH
T ss_pred CceEEEEeeCHHHHHHHHHHHHCCCEEEEEeCCHH
Confidence 36899999999999999999999999999998764
No 409
>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii}
Probab=94.39 E-value=0.035 Score=50.31 Aligned_cols=35 Identities=23% Similarity=0.166 Sum_probs=32.2
Q ss_pred CCcEEEECCchhHHHHHHhhhccCceEEEEcCCCc
Q 018704 62 KPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRNH 96 (351)
Q Consensus 62 ~~~VvIIG~G~aGl~aA~~L~~~g~~v~vie~~~~ 96 (351)
.++|.|||+|.-|.+.|..|++.|++|+++++++.
T Consensus 29 ~mkI~VIGaG~mG~alA~~La~~G~~V~l~~r~~~ 63 (356)
T 3k96_A 29 KHPIAILGAGSWGTALALVLARKGQKVRLWSYESD 63 (356)
T ss_dssp CSCEEEECCSHHHHHHHHHHHTTTCCEEEECSCHH
T ss_pred CCeEEEECccHHHHHHHHHHHHCCCeEEEEeCCHH
Confidence 46899999999999999999999999999998654
No 410
>2hjr_A Malate dehydrogenase; malaria, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: CIT APR; 2.20A {Cryptosporidium parvum}
Probab=94.30 E-value=0.043 Score=49.08 Aligned_cols=34 Identities=15% Similarity=0.229 Sum_probs=31.4
Q ss_pred CcEEEECCchhHHHHHHhhhccCc-eEEEEcCCCc
Q 018704 63 PRVVVLGSGWAGCRLMKGIDTSLY-DVVCVSPRNH 96 (351)
Q Consensus 63 ~~VvIIG~G~aGl~aA~~L~~~g~-~v~vie~~~~ 96 (351)
.+|+|||+|..|.+.|..|+..|+ +|+++|.+..
T Consensus 15 ~kI~ViGaG~vG~~iA~~la~~g~~~V~L~Di~~~ 49 (328)
T 2hjr_A 15 KKISIIGAGQIGSTIALLLGQKDLGDVYMFDIIEG 49 (328)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSTT
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCeEEEEECCHH
Confidence 589999999999999999999998 9999998754
No 411
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=94.24 E-value=0.031 Score=51.71 Aligned_cols=35 Identities=20% Similarity=0.138 Sum_probs=32.1
Q ss_pred CCcEEEECCchhHHHHHHhhhccCceEEEEcCCCc
Q 018704 62 KPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRNH 96 (351)
Q Consensus 62 ~~~VvIIG~G~aGl~aA~~L~~~g~~v~vie~~~~ 96 (351)
..+|+|||.|..|..+|..|.+.|++|++||.++.
T Consensus 4 ~~~viIiG~Gr~G~~va~~L~~~g~~vvvId~d~~ 38 (413)
T 3l9w_A 4 GMRVIIAGFGRFGQITGRLLLSSGVKMVVLDHDPD 38 (413)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEEEECCHH
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCCEEEEECCHH
Confidence 36899999999999999999999999999997754
No 412
>3g79_A NDP-N-acetyl-D-galactosaminuronic acid dehydrogen; structural genomics, protein structure initiative; 2.40A {Methanosarcina mazei GO1}
Probab=94.21 E-value=0.042 Score=51.73 Aligned_cols=34 Identities=18% Similarity=0.317 Sum_probs=32.0
Q ss_pred CcEEEECCchhHHHHHHhhhcc-Cc-eEEEEcCCCc
Q 018704 63 PRVVVLGSGWAGCRLMKGIDTS-LY-DVVCVSPRNH 96 (351)
Q Consensus 63 ~~VvIIG~G~aGl~aA~~L~~~-g~-~v~vie~~~~ 96 (351)
++|.|||+|..|+..|..|++. |+ +|+++|.++.
T Consensus 19 mkIaVIGlG~mG~~lA~~la~~~G~~~V~~~D~~~~ 54 (478)
T 3g79_A 19 KKIGVLGMGYVGIPAAVLFADAPCFEKVLGFQRNSK 54 (478)
T ss_dssp CEEEEECCSTTHHHHHHHHHHSTTCCEEEEECCCCT
T ss_pred CEEEEECcCHHHHHHHHHHHHhCCCCeEEEEECChh
Confidence 6899999999999999999999 99 9999998765
No 413
>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6
Probab=94.21 E-value=0.036 Score=50.00 Aligned_cols=34 Identities=18% Similarity=0.125 Sum_probs=31.3
Q ss_pred CcEEEECCchhHHHHHHhhhccCceEEEEcCCCc
Q 018704 63 PRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRNH 96 (351)
Q Consensus 63 ~~VvIIG~G~aGl~aA~~L~~~g~~v~vie~~~~ 96 (351)
++|.|||+|..|...|..|++.|++|+++++++.
T Consensus 5 mki~iiG~G~~G~~~a~~L~~~g~~V~~~~r~~~ 38 (359)
T 1bg6_A 5 KTYAVLGLGNGGHAFAAYLALKGQSVLAWDIDAQ 38 (359)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHH
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCEEEEEeCCHH
Confidence 6899999999999999999999999999998643
No 414
>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A
Probab=94.20 E-value=0.042 Score=49.89 Aligned_cols=34 Identities=24% Similarity=0.140 Sum_probs=31.5
Q ss_pred CCcEEEECCchhHHHHHHhhhccCceEEEEcCCC
Q 018704 62 KPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRN 95 (351)
Q Consensus 62 ~~~VvIIG~G~aGl~aA~~L~~~g~~v~vie~~~ 95 (351)
..+|+|+|+|.+|+.+|..|+..|.+|+++|+++
T Consensus 167 ~~~VlViGaGgvG~~aa~~a~~~Ga~V~v~dr~~ 200 (361)
T 1pjc_A 167 PGKVVILGGGVVGTEAAKMAVGLGAQVQIFDINV 200 (361)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCEEEEEeCCH
Confidence 3789999999999999999999999999999864
No 415
>3l6d_A Putative oxidoreductase; structural genomics, protein structure initiative, oxidoredu PSI-2; HET: MSE; 1.90A {Pseudomonas putida}
Probab=94.18 E-value=0.05 Score=48.12 Aligned_cols=36 Identities=17% Similarity=0.023 Sum_probs=32.5
Q ss_pred CCCcEEEECCchhHHHHHHhhhccCceEEEEcCCCc
Q 018704 61 EKPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRNH 96 (351)
Q Consensus 61 ~~~~VvIIG~G~aGl~aA~~L~~~g~~v~vie~~~~ 96 (351)
+.++|.|||.|..|...|..|.+.|++|+++|+++.
T Consensus 8 ~~~~IgiIG~G~mG~~~A~~l~~~G~~V~~~dr~~~ 43 (306)
T 3l6d_A 8 FEFDVSVIGLGAMGTIMAQVLLKQGKRVAIWNRSPG 43 (306)
T ss_dssp CSCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSHH
T ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHH
Confidence 346899999999999999999999999999998753
No 416
>3g17_A Similar to 2-dehydropantoate 2-reductase; structural genomics, putative 2-dehydropantoate 2-reductase, protein structure initiative; 2.30A {Staphylococcus aureus subsp}
Probab=94.18 E-value=0.025 Score=49.73 Aligned_cols=33 Identities=18% Similarity=0.312 Sum_probs=30.9
Q ss_pred CcEEEECCchhHHHHHHhhhccCceEEEEcCCC
Q 018704 63 PRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRN 95 (351)
Q Consensus 63 ~~VvIIG~G~aGl~aA~~L~~~g~~v~vie~~~ 95 (351)
++|+|||+|..|.+.|..|++.|.+|++++++.
T Consensus 3 mkI~iiGaGa~G~~~a~~L~~~g~~V~~~~r~~ 35 (294)
T 3g17_A 3 LSVAIIGPGAVGTTIAYELQQSLPHTTLIGRHA 35 (294)
T ss_dssp CCEEEECCSHHHHHHHHHHHHHCTTCEEEESSC
T ss_pred cEEEEECCCHHHHHHHHHHHHCCCeEEEEEecc
Confidence 689999999999999999999999999999874
No 417
>3ego_A Probable 2-dehydropantoate 2-reductase; structural genomics, PANE, unknown function, cytoplasm, NADP, oxidoreductase; 1.90A {Bacillus subtilis}
Probab=94.17 E-value=0.041 Score=48.74 Aligned_cols=33 Identities=21% Similarity=0.281 Sum_probs=30.5
Q ss_pred CCcEEEECCchhHHHHHHhhhccCceEEEEcCCC
Q 018704 62 KPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRN 95 (351)
Q Consensus 62 ~~~VvIIG~G~aGl~aA~~L~~~g~~v~vie~~~ 95 (351)
+++|+|||+|..|.+.|..|+ .|.+|+++++.+
T Consensus 2 ~mkI~IiGaGa~G~~~a~~L~-~g~~V~~~~r~~ 34 (307)
T 3ego_A 2 SLKIGIIGGGSVGLLCAYYLS-LYHDVTVVTRRQ 34 (307)
T ss_dssp CCEEEEECCSHHHHHHHHHHH-TTSEEEEECSCH
T ss_pred CCEEEEECCCHHHHHHHHHHh-cCCceEEEECCH
Confidence 368999999999999999999 999999999875
No 418
>1pjq_A CYSG, siroheme synthase; rossman fold, nucleotide binding motif, SAM, NAD, phosphoserine, transferase/oxidoreductase/lyase complex; HET: SEP PGE SAH; 2.21A {Salmonella typhimurium} SCOP: c.2.1.11 c.90.1.1 e.37.1.1 PDB: 1pjs_A* 1pjt_A*
Probab=94.17 E-value=0.037 Score=52.00 Aligned_cols=34 Identities=9% Similarity=0.005 Sum_probs=31.7
Q ss_pred CCcEEEECCchhHHHHHHhhhccCceEEEEcCCC
Q 018704 62 KPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRN 95 (351)
Q Consensus 62 ~~~VvIIG~G~aGl~aA~~L~~~g~~v~vie~~~ 95 (351)
.++|+|||+|..|...|..|.+.|.+|+|++++.
T Consensus 12 ~~~vlVvGgG~va~~k~~~L~~~ga~V~vi~~~~ 45 (457)
T 1pjq_A 12 DRDCLIVGGGDVAERKARLLLEAGARLTVNALTF 45 (457)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTBEEEEEESSC
T ss_pred CCEEEEECCCHHHHHHHHHHHhCcCEEEEEcCCC
Confidence 4789999999999999999999999999999864
No 419
>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}
Probab=94.09 E-value=0.045 Score=48.14 Aligned_cols=35 Identities=14% Similarity=0.114 Sum_probs=32.2
Q ss_pred CCcEEEECCchhHHHHHHhhhccCceEEEEcCCCc
Q 018704 62 KPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRNH 96 (351)
Q Consensus 62 ~~~VvIIG~G~aGl~aA~~L~~~g~~v~vie~~~~ 96 (351)
.++|.|||.|..|...|..|++.|++|+++|+++.
T Consensus 15 ~~~I~vIG~G~mG~~~A~~l~~~G~~V~~~dr~~~ 49 (296)
T 3qha_A 15 QLKLGYIGLGNMGAPMATRMTEWPGGVTVYDIRIE 49 (296)
T ss_dssp CCCEEEECCSTTHHHHHHHHTTSTTCEEEECSSTT
T ss_pred CCeEEEECcCHHHHHHHHHHHHCCCeEEEEeCCHH
Confidence 46899999999999999999999999999998664
No 420
>3k6j_A Protein F01G10.3, confirmed by transcript evidenc; rossmann fold, oxidoreductase; 2.20A {Caenorhabditis elegans}
Probab=94.08 E-value=0.057 Score=50.47 Aligned_cols=36 Identities=14% Similarity=0.195 Sum_probs=33.0
Q ss_pred CCCcEEEECCchhHHHHHHhhhccCceEEEEcCCCc
Q 018704 61 EKPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRNH 96 (351)
Q Consensus 61 ~~~~VvIIG~G~aGl~aA~~L~~~g~~v~vie~~~~ 96 (351)
...+|.|||+|.-|...|..|++.|++|+++|.++.
T Consensus 53 ~i~kVaVIGaG~MG~~IA~~la~aG~~V~l~D~~~e 88 (460)
T 3k6j_A 53 DVNSVAIIGGGTMGKAMAICFGLAGIETFLVVRNEQ 88 (460)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHH
T ss_pred cCCEEEEECCCHHHHHHHHHHHHCCCeEEEEECcHH
Confidence 346899999999999999999999999999998765
No 421
>3pid_A UDP-glucose 6-dehydrogenase; rossmann fold, oxidoreductase; 1.40A {Klebsiella pneumoniae} PDB: 3pln_A* 3pjg_A* 3phl_A* 3plr_A*
Probab=94.06 E-value=0.044 Score=50.82 Aligned_cols=34 Identities=18% Similarity=0.182 Sum_probs=30.8
Q ss_pred CCcEEEECCchhHHHHHHhhhccCceEEEEcCCCc
Q 018704 62 KPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRNH 96 (351)
Q Consensus 62 ~~~VvIIG~G~aGl~aA~~L~~~g~~v~vie~~~~ 96 (351)
.++|.|||.|..|+..|..|++ |++|+++|.++.
T Consensus 36 ~mkIaVIGlG~mG~~lA~~La~-G~~V~~~D~~~~ 69 (432)
T 3pid_A 36 FMKITISGTGYVGLSNGVLIAQ-NHEVVALDIVQA 69 (432)
T ss_dssp CCEEEEECCSHHHHHHHHHHHT-TSEEEEECSCHH
T ss_pred CCEEEEECcCHHHHHHHHHHHc-CCeEEEEecCHH
Confidence 3689999999999999999998 999999998654
No 422
>1t2d_A LDH-P, L-lactate dehydrogenase; ternary complex, oxidoreductase; HET: NAD; 1.10A {Plasmodium falciparum} SCOP: c.2.1.5 d.162.1.1 PDB: 1t25_A* 1t26_A* 1t2c_A* 1t24_A* 2x8l_A 2ydn_A* 2a94_A* 1u4s_A* 1u5a_A* 1u5c_A* 1u4o_A* 1t2e_A* 1xiv_A* 1ceq_A 1ldg_A* 1cet_A* 1oc4_A* 2a92_A* 2aa3_A*
Probab=94.05 E-value=0.055 Score=48.28 Aligned_cols=34 Identities=26% Similarity=0.328 Sum_probs=31.0
Q ss_pred CcEEEECCchhHHHHHHhhhccCc-eEEEEcCCCc
Q 018704 63 PRVVVLGSGWAGCRLMKGIDTSLY-DVVCVSPRNH 96 (351)
Q Consensus 63 ~~VvIIG~G~aGl~aA~~L~~~g~-~v~vie~~~~ 96 (351)
.+|+|||+|..|...|..|+..|+ +|+++|.++.
T Consensus 5 ~kI~VIGaG~vG~~ia~~la~~g~~~v~L~Di~~~ 39 (322)
T 1t2d_A 5 AKIVLVGSGMIGGVMATLIVQKNLGDVVLFDIVKN 39 (322)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSSS
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCeEEEEeCCHH
Confidence 589999999999999999999888 9999997654
No 423
>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}
Probab=94.04 E-value=0.051 Score=47.18 Aligned_cols=35 Identities=11% Similarity=0.289 Sum_probs=31.9
Q ss_pred CCcEEEECCchhHHHHHHhhhccCceEEEEcCCCc
Q 018704 62 KPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRNH 96 (351)
Q Consensus 62 ~~~VvIIG~G~aGl~aA~~L~~~g~~v~vie~~~~ 96 (351)
+++|+|+|+|..|-..+..|.+.|++|+++.+++.
T Consensus 5 ~~~ilVtGaG~iG~~l~~~L~~~g~~V~~~~r~~~ 39 (286)
T 3ius_A 5 TGTLLSFGHGYTARVLSRALAPQGWRIIGTSRNPD 39 (286)
T ss_dssp CCEEEEETCCHHHHHHHHHHGGGTCEEEEEESCGG
T ss_pred cCcEEEECCcHHHHHHHHHHHHCCCEEEEEEcChh
Confidence 46899999999999999999999999999998653
No 424
>3tl2_A Malate dehydrogenase; center for structural genomics of infectious diseases, csgid dehydrogenase, oxidoreductase, citric acid cycle; 1.70A {Bacillus anthracis}
Probab=94.04 E-value=0.053 Score=48.16 Aligned_cols=33 Identities=27% Similarity=0.398 Sum_probs=30.9
Q ss_pred CCcEEEECCchhHHHHHHhhhccCc-eEEEEcCC
Q 018704 62 KPRVVVLGSGWAGCRLMKGIDTSLY-DVVCVSPR 94 (351)
Q Consensus 62 ~~~VvIIG~G~aGl~aA~~L~~~g~-~v~vie~~ 94 (351)
..+|.|||+|..|.+.|..|+..|+ +|+++|..
T Consensus 8 ~~kv~ViGaG~vG~~ia~~l~~~g~~~v~l~D~~ 41 (315)
T 3tl2_A 8 RKKVSVIGAGFTGATTAFLLAQKELADVVLVDIP 41 (315)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCCEEEEECCG
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCeEEEEecc
Confidence 4689999999999999999999999 99999986
No 425
>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A
Probab=93.98 E-value=0.035 Score=46.93 Aligned_cols=34 Identities=18% Similarity=0.132 Sum_probs=30.5
Q ss_pred CCcEEEECCchhHHHHHHhhhccCceEEEEcCCCc
Q 018704 62 KPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRNH 96 (351)
Q Consensus 62 ~~~VvIIG~G~aGl~aA~~L~~~g~~v~vie~~~~ 96 (351)
..+|+|||+|..|...|..|.+.|+ |+++|+++.
T Consensus 9 ~~~viI~G~G~~G~~la~~L~~~g~-v~vid~~~~ 42 (234)
T 2aef_A 9 SRHVVICGWSESTLECLRELRGSEV-FVLAEDENV 42 (234)
T ss_dssp -CEEEEESCCHHHHHHHHHSTTSEE-EEEESCGGG
T ss_pred CCEEEEECCChHHHHHHHHHHhCCe-EEEEECCHH
Confidence 4689999999999999999999999 999998654
No 426
>1ur5_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle; HET: NAD; 1.75A {Chloroflexus aurantiacus} SCOP: c.2.1.5 d.162.1.1 PDB: 1uxg_A* 1guy_A* 1uxk_A* 1uxh_A* 1uxj_A* 1uxi_A*
Probab=93.98 E-value=0.052 Score=48.12 Aligned_cols=34 Identities=15% Similarity=0.359 Sum_probs=30.6
Q ss_pred CcEEEECCchhHHHHHHhhhccCc-eEEEEcCCCc
Q 018704 63 PRVVVLGSGWAGCRLMKGIDTSLY-DVVCVSPRNH 96 (351)
Q Consensus 63 ~~VvIIG~G~aGl~aA~~L~~~g~-~v~vie~~~~ 96 (351)
++|+|||+|..|...|..|+..|+ +|+++|.++.
T Consensus 3 ~kI~VIGaG~vG~~~a~~la~~g~~~v~L~Di~~~ 37 (309)
T 1ur5_A 3 KKISIIGAGFVGSTTAHWLAAKELGDIVLLDIVEG 37 (309)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCSEEEEECSSSS
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCCeEEEEeCCcc
Confidence 589999999999999999999886 8999997653
No 427
>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}
Probab=93.97 E-value=0.045 Score=48.33 Aligned_cols=35 Identities=11% Similarity=0.017 Sum_probs=32.1
Q ss_pred CCcEEEECCchhHHHHHHhhhccCceEEEEcCCCc
Q 018704 62 KPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRNH 96 (351)
Q Consensus 62 ~~~VvIIG~G~aGl~aA~~L~~~g~~v~vie~~~~ 96 (351)
.++|.|||.|..|...|..|++.|++|+++|+++.
T Consensus 7 ~~~I~iIG~G~mG~~~a~~l~~~G~~V~~~dr~~~ 41 (303)
T 3g0o_A 7 DFHVGIVGLGSMGMGAARSCLRAGLSTWGADLNPQ 41 (303)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHH
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCeEEEEECCHH
Confidence 46899999999999999999999999999998653
No 428
>1z82_A Glycerol-3-phosphate dehydrogenase; TM0378, structural genom joint center for structural genomics, JCSG, protein structu initiative, PSI; HET: MSE NDP G3H G3P; 2.00A {Thermotoga maritima}
Probab=93.93 E-value=0.05 Score=48.75 Aligned_cols=35 Identities=23% Similarity=0.264 Sum_probs=31.8
Q ss_pred CCCcEEEECCchhHHHHHHhhhccCceEEEEcCCC
Q 018704 61 EKPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRN 95 (351)
Q Consensus 61 ~~~~VvIIG~G~aGl~aA~~L~~~g~~v~vie~~~ 95 (351)
+.++|.|||+|.-|.+.|..|.+.|++|+++++.+
T Consensus 13 ~~~kI~iIG~G~mG~ala~~L~~~G~~V~~~~r~~ 47 (335)
T 1z82_A 13 MEMRFFVLGAGSWGTVFAQMLHENGEEVILWARRK 47 (335)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSH
T ss_pred cCCcEEEECcCHHHHHHHHHHHhCCCeEEEEeCCH
Confidence 45799999999999999999999999999999864
No 429
>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}
Probab=93.91 E-value=0.051 Score=49.46 Aligned_cols=34 Identities=24% Similarity=0.179 Sum_probs=31.6
Q ss_pred CCcEEEECCchhHHHHHHhhhccCceEEEEcCCC
Q 018704 62 KPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRN 95 (351)
Q Consensus 62 ~~~VvIIG~G~aGl~aA~~L~~~g~~v~vie~~~ 95 (351)
..+|+|+|+|..|+.+|..|+..|.+|+++|+++
T Consensus 166 ~~~V~ViGaG~iG~~~a~~l~~~Ga~V~~~d~~~ 199 (369)
T 2eez_A 166 PASVVILGGGTVGTNAAKIALGMGAQVTILDVNH 199 (369)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCEEEEEECCH
Confidence 4789999999999999999999999999999864
No 430
>3dtt_A NADP oxidoreductase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: NAP; 1.70A {Arthrobacter SP}
Probab=93.89 E-value=0.047 Score=46.56 Aligned_cols=36 Identities=17% Similarity=0.224 Sum_probs=32.4
Q ss_pred CCCcEEEECCchhHHHHHHhhhccCceEEEEcCCCc
Q 018704 61 EKPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRNH 96 (351)
Q Consensus 61 ~~~~VvIIG~G~aGl~aA~~L~~~g~~v~vie~~~~ 96 (351)
..++|.|||+|..|.+.|..|.+.|++|+++++++.
T Consensus 18 ~~~kIgiIG~G~mG~alA~~L~~~G~~V~~~~r~~~ 53 (245)
T 3dtt_A 18 QGMKIAVLGTGTVGRTMAGALADLGHEVTIGTRDPK 53 (245)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCHH
T ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCEEEEEeCChh
Confidence 457899999999999999999999999999998654
No 431
>3axb_A Putative oxidoreductase; dinucleotide-binding fold; HET: FAD; 1.92A {Aeropyrum pernix} PDB: 3vqr_A*
Probab=93.83 E-value=0.059 Score=50.21 Aligned_cols=60 Identities=27% Similarity=0.380 Sum_probs=46.9
Q ss_pred HHHHHHHHHHhhhcCcEEEcCe-EEEEeC-----------------C---eEEecCCcEE--eccEEEEecCCCCccccc
Q 018704 284 DRLRHYATTQLSKSGVRLVRGI-VKDVDS-----------------Q---KLILNDGTEV--PYGLLVWSTGVGPSTLVK 340 (351)
Q Consensus 284 ~~~~~~~~~~l~~~gV~~~~~~-v~~v~~-----------------~---~v~~~~g~~~--~~D~vi~a~G~~p~~~~~ 340 (351)
..+...+.+.+++.|++++.+. |+++.. + +|.+.+| ++ .||.||+|+|.+...++.
T Consensus 181 ~~l~~~L~~~~~~~Gv~i~~~~~V~~i~~~~~~~~~~~~~~~~~~~~~v~~V~t~~g-~i~~~Ad~VV~AtG~~s~~l~~ 259 (448)
T 3axb_A 181 EKVVDYYYRRASGAGVEFIFGRRVVGVELKPRVELGIEGEPLPWQEARASAAVLSDG-TRVEVGEKLVVAAGVWSNRLLN 259 (448)
T ss_dssp HHHHHHHHHHHHHTTCEEEESCCEEEEEEEESSCCCCTTSSCTTSCEEEEEEEETTS-CEEEEEEEEEECCGGGHHHHHG
T ss_pred HHHHHHHHHHHHhCCCEEEcCCeEEEEEecccccccccccccccCCCceEEEEeCCC-EEeecCCEEEECCCcCHHHHHH
Confidence 4778888889999999999984 888853 2 3556677 68 999999999987666666
Q ss_pred cCCC
Q 018704 341 SLDL 344 (351)
Q Consensus 341 ~~gl 344 (351)
.+|+
T Consensus 260 ~~g~ 263 (448)
T 3axb_A 260 PLGI 263 (448)
T ss_dssp GGTC
T ss_pred HcCC
Confidence 6554
No 432
>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*
Probab=93.79 E-value=0.055 Score=49.40 Aligned_cols=36 Identities=25% Similarity=0.235 Sum_probs=32.4
Q ss_pred CCCcEEEECCchhHHHHHHhhhccCceEEEEcCCCc
Q 018704 61 EKPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRNH 96 (351)
Q Consensus 61 ~~~~VvIIG~G~aGl~aA~~L~~~g~~v~vie~~~~ 96 (351)
...+|+|||+|..|+.+|..++..|.+|+++|+...
T Consensus 167 ~g~~V~ViG~G~iG~~~a~~a~~~Ga~V~~~d~~~~ 202 (377)
T 2vhw_A 167 EPADVVVIGAGTAGYNAARIANGMGATVTVLDINID 202 (377)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCHH
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCEEEEEeCCHH
Confidence 357899999999999999999999999999998653
No 433
>4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A*
Probab=93.79 E-value=0.046 Score=48.97 Aligned_cols=39 Identities=21% Similarity=0.206 Sum_probs=30.6
Q ss_pred CCCCCCcEEEECC-chhHHHHHHhhhccCceEEEEcCCCc
Q 018704 58 KANEKPRVVVLGS-GWAGCRLMKGIDTSLYDVVCVSPRNH 96 (351)
Q Consensus 58 ~~~~~~~VvIIG~-G~aGl~aA~~L~~~g~~v~vie~~~~ 96 (351)
+....++|+|.|| |..|...+..|.+.|++|+++++...
T Consensus 15 ~~~~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~ 54 (347)
T 4id9_A 15 VPRGSHMILVTGSAGRVGRAVVAALRTQGRTVRGFDLRPS 54 (347)
T ss_dssp ------CEEEETTTSHHHHHHHHHHHHTTCCEEEEESSCC
T ss_pred cccCCCEEEEECCCChHHHHHHHHHHhCCCEEEEEeCCCC
Confidence 3345678999998 99999999999999999999998653
No 434
>1zcj_A Peroxisomal bifunctional enzyme; peroxisomal multifunctional enzyme type 1, L-bifunction enzyme, MFE-1, fatty acid beta oxidation; 1.90A {Rattus norvegicus}
Probab=93.79 E-value=0.061 Score=50.59 Aligned_cols=35 Identities=26% Similarity=0.214 Sum_probs=32.1
Q ss_pred CCcEEEECCchhHHHHHHhhhccCceEEEEcCCCc
Q 018704 62 KPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRNH 96 (351)
Q Consensus 62 ~~~VvIIG~G~aGl~aA~~L~~~g~~v~vie~~~~ 96 (351)
..+|.|||+|..|...|..|++.|++|+++|+++.
T Consensus 37 ~~kV~VIGaG~MG~~iA~~la~~G~~V~l~D~~~~ 71 (463)
T 1zcj_A 37 VSSVGVLGLGTMGRGIAISFARVGISVVAVESDPK 71 (463)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTTTCEEEEECSSHH
T ss_pred CCEEEEECcCHHHHHHHHHHHhCCCeEEEEECCHH
Confidence 46899999999999999999999999999998754
No 435
>1mv8_A GMD, GDP-mannose 6-dehydrogenase; rossman fold, domain-swapped dimer, enzyme complex with COFA product, oxidoreductase; HET: SUC NAD GDX; 1.55A {Pseudomonas aeruginosa} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1mfz_A* 1muu_A*
Probab=93.77 E-value=0.042 Score=51.28 Aligned_cols=32 Identities=19% Similarity=0.357 Sum_probs=30.1
Q ss_pred cEEEECCchhHHHHHHhhhccCceEEEEcCCC
Q 018704 64 RVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRN 95 (351)
Q Consensus 64 ~VvIIG~G~aGl~aA~~L~~~g~~v~vie~~~ 95 (351)
+|.|||+|..|+..|..|++.|++|+++|+++
T Consensus 2 kI~VIG~G~vG~~~A~~la~~G~~V~~~d~~~ 33 (436)
T 1mv8_A 2 RISIFGLGYVGAVCAGCLSARGHEVIGVDVSS 33 (436)
T ss_dssp EEEEECCSTTHHHHHHHHHHTTCEEEEECSCH
T ss_pred EEEEECCCHHHHHHHHHHHHCCCEEEEEECCH
Confidence 69999999999999999999999999999764
No 436
>2v6b_A L-LDH, L-lactate dehydrogenase; oxidoreductase, radioresistance, NAD, cytoplasm, mesophilic, glycolysis; 2.50A {Deinococcus radiodurans}
Probab=93.77 E-value=0.055 Score=47.86 Aligned_cols=33 Identities=21% Similarity=0.283 Sum_probs=30.3
Q ss_pred CcEEEECCchhHHHHHHhhhccCc--eEEEEcCCC
Q 018704 63 PRVVVLGSGWAGCRLMKGIDTSLY--DVVCVSPRN 95 (351)
Q Consensus 63 ~~VvIIG~G~aGl~aA~~L~~~g~--~v~vie~~~ 95 (351)
++|+|||+|..|.+.|..|+..|+ +|+++|.+.
T Consensus 1 mkI~VIGaG~vG~~la~~la~~g~~~eV~L~D~~~ 35 (304)
T 2v6b_A 1 MKVGVVGTGFVGSTAAFALVLRGSCSELVLVDRDE 35 (304)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCCH
Confidence 379999999999999999999998 999999865
No 437
>1zej_A HBD-9, 3-hydroxyacyl-COA dehydrogenase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: PE8; 2.00A {Archaeoglobus fulgidus}
Probab=93.75 E-value=0.056 Score=47.45 Aligned_cols=35 Identities=26% Similarity=0.343 Sum_probs=31.5
Q ss_pred CCCcEEEECCchhHHHHHHhhhccCceEEEEcCCCc
Q 018704 61 EKPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRNH 96 (351)
Q Consensus 61 ~~~~VvIIG~G~aGl~aA~~L~~~g~~v~vie~~~~ 96 (351)
.+++|.|||+|.-|-..|..|+ .|++|+++|+++.
T Consensus 11 ~~~~V~vIG~G~MG~~iA~~la-aG~~V~v~d~~~~ 45 (293)
T 1zej_A 11 HHMKVFVIGAGLMGRGIAIAIA-SKHEVVLQDVSEK 45 (293)
T ss_dssp -CCEEEEECCSHHHHHHHHHHH-TTSEEEEECSCHH
T ss_pred CCCeEEEEeeCHHHHHHHHHHH-cCCEEEEEECCHH
Confidence 3578999999999999999999 9999999998754
No 438
>4dgk_A Phytoene dehydrogenase; the FAD/NAD(P)-binding rossmann fold, oxidoreductase; 2.35A {Pantoea ananatis}
Probab=93.75 E-value=0.094 Score=49.55 Aligned_cols=36 Identities=19% Similarity=0.340 Sum_probs=31.7
Q ss_pred CCcEEEECCchhHHHHHHhhhccCceEEEEcCCCcc
Q 018704 62 KPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRNHM 97 (351)
Q Consensus 62 ~~~VvIIG~G~aGl~aA~~L~~~g~~v~vie~~~~~ 97 (351)
+++|||||||++||+||.+|++.|++|+|+|+++..
T Consensus 1 Mk~VvVIGaG~~GL~aA~~La~~G~~V~VlEa~~~~ 36 (501)
T 4dgk_A 1 MKPTTVIGAGFGGLALAIRLQAAGIPVLLLEQRDKP 36 (501)
T ss_dssp CCCEEEECCHHHHHHHHHHHHHTTCCEEEECCC---
T ss_pred CCCEEEECCcHHHHHHHHHHHHCCCcEEEEccCCCC
Confidence 368999999999999999999999999999998775
No 439
>3gvi_A Malate dehydrogenase; NAD, oxidoreductase, tricarboxylic acid cycle, structural genomics; HET: ADP; 2.25A {Brucella melitensis biovar ABORTUS2308} PDB: 3gvh_A*
Probab=93.71 E-value=0.066 Score=47.75 Aligned_cols=35 Identities=23% Similarity=0.306 Sum_probs=31.7
Q ss_pred CCcEEEECCchhHHHHHHhhhccCc-eEEEEcCCCc
Q 018704 62 KPRVVVLGSGWAGCRLMKGIDTSLY-DVVCVSPRNH 96 (351)
Q Consensus 62 ~~~VvIIG~G~aGl~aA~~L~~~g~-~v~vie~~~~ 96 (351)
..+|+|||+|..|.+.|..|+..|+ +++++|..+.
T Consensus 7 ~~kI~viGaG~vG~~~a~~l~~~~~~~v~L~Di~~~ 42 (324)
T 3gvi_A 7 RNKIALIGSGMIGGTLAHLAGLKELGDVVLFDIAEG 42 (324)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSSS
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCeEEEEeCCch
Confidence 4689999999999999999999888 9999998664
No 440
>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}
Probab=93.68 E-value=0.063 Score=46.92 Aligned_cols=34 Identities=15% Similarity=0.181 Sum_probs=31.5
Q ss_pred CcEEEECCchhHHHHHHhhhccCceEEEEcCCCc
Q 018704 63 PRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRNH 96 (351)
Q Consensus 63 ~~VvIIG~G~aGl~aA~~L~~~g~~v~vie~~~~ 96 (351)
++|.|||.|..|...|..|.+.|++|+++|+++.
T Consensus 2 ~~i~iIG~G~mG~~~a~~l~~~G~~V~~~dr~~~ 35 (287)
T 3pef_A 2 QKFGFIGLGIMGSAMAKNLVKAGCSVTIWNRSPE 35 (287)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSGG
T ss_pred CEEEEEeecHHHHHHHHHHHHCCCeEEEEcCCHH
Confidence 5799999999999999999999999999998654
No 441
>3orq_A N5-carboxyaminoimidazole ribonucleotide synthetas; ATP-grAsp superfamily, ligase,biosynthetic protein; HET: MSE ADP; 2.23A {Staphylococcus aureus subsp} PDB: 3orr_A
Probab=93.65 E-value=0.092 Score=47.88 Aligned_cols=36 Identities=19% Similarity=0.345 Sum_probs=32.5
Q ss_pred CCCcEEEECCchhHHHHHHhhhccCceEEEEcCCCc
Q 018704 61 EKPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRNH 96 (351)
Q Consensus 61 ~~~~VvIIG~G~aGl~aA~~L~~~g~~v~vie~~~~ 96 (351)
..++|.|||+|.-|..+|..+++.|++|+++|+.+.
T Consensus 11 ~~~~IlIlG~G~lg~~la~aa~~lG~~viv~d~~~~ 46 (377)
T 3orq_A 11 FGATIGIIGGGQLGKMMAQSAQKMGYKVVVLDPSED 46 (377)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCTT
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCEEEEEECCCC
Confidence 347899999999999999999999999999997654
No 442
>2qyt_A 2-dehydropantoate 2-reductase; APC81190, porphyromonas gingi W83, structural genomics, PSI-2; HET: MSE; 2.15A {Porphyromonas gingivalis}
Probab=93.60 E-value=0.043 Score=48.57 Aligned_cols=31 Identities=16% Similarity=0.166 Sum_probs=29.4
Q ss_pred CcEEEECCchhHHHHHHhhhcc-----C-ceEEEEcC
Q 018704 63 PRVVVLGSGWAGCRLMKGIDTS-----L-YDVVCVSP 93 (351)
Q Consensus 63 ~~VvIIG~G~aGl~aA~~L~~~-----g-~~v~vie~ 93 (351)
++|.|||+|..|...|..|.+. | ++|+++++
T Consensus 9 m~I~iiG~G~mG~~~a~~L~~~~~~~~g~~~V~~~~r 45 (317)
T 2qyt_A 9 IKIAVFGLGGVGGYYGAMLALRAAATDGLLEVSWIAR 45 (317)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHHHHTTSSEEEEEECC
T ss_pred CEEEEECcCHHHHHHHHHHHhCccccCCCCCEEEEEc
Confidence 5899999999999999999998 9 99999998
No 443
>2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A*
Probab=93.57 E-value=0.059 Score=44.96 Aligned_cols=34 Identities=32% Similarity=0.314 Sum_probs=30.6
Q ss_pred CCcEEEECCchhHHHHHHhhhccCceEEEEcCCC
Q 018704 62 KPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRN 95 (351)
Q Consensus 62 ~~~VvIIG~G~aGl~aA~~L~~~g~~v~vie~~~ 95 (351)
.++|.|||+|..|.+.|..|.+.|++|++++++.
T Consensus 28 ~~~I~iiG~G~~G~~la~~l~~~g~~V~~~~r~~ 61 (215)
T 2vns_A 28 APKVGILGSGDFARSLATRLVGSGFKVVVGSRNP 61 (215)
T ss_dssp -CCEEEECCSHHHHHHHHHHHHTTCCEEEEESSH
T ss_pred CCEEEEEccCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 3689999999999999999999999999999854
No 444
>1dlj_A UDP-glucose dehydrogenase; rossmann fold, ternary complex, crystallographic dimer, oxidoreductase; HET: NAI UGA; 1.80A {Streptococcus pyogenes} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1dli_A*
Probab=93.57 E-value=0.056 Score=49.85 Aligned_cols=31 Identities=26% Similarity=0.315 Sum_probs=29.1
Q ss_pred cEEEECCchhHHHHHHhhhccCceEEEEcCCC
Q 018704 64 RVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRN 95 (351)
Q Consensus 64 ~VvIIG~G~aGl~aA~~L~~~g~~v~vie~~~ 95 (351)
+|.|||+|..|+..|..|++ |++|+++|+++
T Consensus 2 kI~VIG~G~vG~~~A~~La~-G~~V~~~d~~~ 32 (402)
T 1dlj_A 2 KIAVAGSGYVGLSLGVLLSL-QNEVTIVDILP 32 (402)
T ss_dssp EEEEECCSHHHHHHHHHHTT-TSEEEEECSCH
T ss_pred EEEEECCCHHHHHHHHHHhC-CCEEEEEECCH
Confidence 69999999999999999999 99999999764
No 445
>4a7p_A UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide; HET: NAD; 3.40A {Sphingomonas elodea}
Probab=93.55 E-value=0.068 Score=49.92 Aligned_cols=34 Identities=24% Similarity=0.402 Sum_probs=31.8
Q ss_pred CcEEEECCchhHHHHHHhhhccCceEEEEcCCCc
Q 018704 63 PRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRNH 96 (351)
Q Consensus 63 ~~VvIIG~G~aGl~aA~~L~~~g~~v~vie~~~~ 96 (351)
.++.|||.|..|+..|..|++.|++|+++|.++.
T Consensus 9 ~~~~vIGlG~vG~~~A~~La~~G~~V~~~D~~~~ 42 (446)
T 4a7p_A 9 VRIAMIGTGYVGLVSGACFSDFGHEVVCVDKDAR 42 (446)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCST
T ss_pred eEEEEEcCCHHHHHHHHHHHHCCCEEEEEeCCHH
Confidence 6899999999999999999999999999997754
No 446
>1y6j_A L-lactate dehydrogenase; southeast collaboratory for structural genomics, secsg, protein struc initiative, PSI, oxidoreductase; 3.01A {Clostridium thermocellum} SCOP: c.2.1.5 d.162.1.1
Probab=93.54 E-value=0.067 Score=47.60 Aligned_cols=34 Identities=15% Similarity=0.362 Sum_probs=30.3
Q ss_pred CCcEEEECCchhHHHHHHhhhccCc--eEEEEcCCC
Q 018704 62 KPRVVVLGSGWAGCRLMKGIDTSLY--DVVCVSPRN 95 (351)
Q Consensus 62 ~~~VvIIG~G~aGl~aA~~L~~~g~--~v~vie~~~ 95 (351)
+.+|+|||+|..|.+.|..|...+. +++++|.+.
T Consensus 7 ~~KI~IiGaG~vG~~~a~~l~~~~~~~ev~L~Di~~ 42 (318)
T 1y6j_A 7 RSKVAIIGAGFVGASAAFTMALRQTANELVLIDVFK 42 (318)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTCSSEEEEECCC-
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCCh
Confidence 4689999999999999999999887 899999764
No 447
>3ihm_A Styrene monooxygenase A; rossman fold, anti-parallel beta strands, dimer, cavity, oxidoreductase; 2.30A {Pseudomonas putida}
Probab=93.51 E-value=0.052 Score=50.45 Aligned_cols=33 Identities=21% Similarity=0.308 Sum_probs=30.3
Q ss_pred CeEEEECCChHHHHHHHHHHHHHHHHHHhhhcCCCCccEEEEEeCCC
Q 018704 231 LHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANE 277 (351)
Q Consensus 231 ~~v~VvGgG~~a~e~a~~l~~~~~~~~~~~~~~~~~~~~v~~~~~~~ 277 (351)
++|+|||||++|+-+|..|++.| .+|+++++..
T Consensus 23 ~~ViIVGaGpaGl~~A~~La~~G--------------~~V~viE~~~ 55 (430)
T 3ihm_A 23 KRIGIVGAGTAGLHLGLFLRQHD--------------VDVTVYTDRK 55 (430)
T ss_dssp CEEEEECCHHHHHHHHHHHHHTT--------------CEEEEEESCC
T ss_pred CCEEEECCcHHHHHHHHHHHHCC--------------CeEEEEcCCC
Confidence 48999999999999999999887 9999999863
No 448
>4ezb_A Uncharacterized conserved protein; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 2.10A {Sinorhizobium meliloti}
Probab=93.44 E-value=0.068 Score=47.54 Aligned_cols=34 Identities=15% Similarity=0.157 Sum_probs=31.7
Q ss_pred CCcEEEECCchhHHHHHHhhhccC-ceEEEEcCCC
Q 018704 62 KPRVVVLGSGWAGCRLMKGIDTSL-YDVVCVSPRN 95 (351)
Q Consensus 62 ~~~VvIIG~G~aGl~aA~~L~~~g-~~v~vie~~~ 95 (351)
.++|.|||.|..|...|..|++.| ++|+++|+++
T Consensus 24 ~m~IgvIG~G~mG~~lA~~L~~~G~~~V~~~dr~~ 58 (317)
T 4ezb_A 24 MTTIAFIGFGEAAQSIAGGLGGRNAARLAAYDLRF 58 (317)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTTTCSEEEEECGGG
T ss_pred CCeEEEECccHHHHHHHHHHHHcCCCeEEEEeCCC
Confidence 468999999999999999999999 9999999865
No 449
>1evy_A Glycerol-3-phosphate dehydrogenase; rossmann fold, oxidoreductase; HET: MYS; 1.75A {Leishmania mexicana} SCOP: a.100.1.6 c.2.1.6 PDB: 1evz_A* 1jdj_A* 1m66_A* 1m67_A* 1n1e_A* 1n1g_A*
Probab=93.41 E-value=0.073 Score=48.28 Aligned_cols=32 Identities=25% Similarity=0.288 Sum_probs=30.4
Q ss_pred cEEEECCchhHHHHHHhhhccCceEEEEcCCC
Q 018704 64 RVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRN 95 (351)
Q Consensus 64 ~VvIIG~G~aGl~aA~~L~~~g~~v~vie~~~ 95 (351)
+|.|||+|..|.+.|..|.+.|++|+++++++
T Consensus 17 kI~iIG~G~mG~~la~~L~~~G~~V~~~~r~~ 48 (366)
T 1evy_A 17 KAVVFGSGAFGTALAMVLSKKCREVCVWHMNE 48 (366)
T ss_dssp EEEEECCSHHHHHHHHHHTTTEEEEEEECSCH
T ss_pred eEEEECCCHHHHHHHHHHHhCCCEEEEEECCH
Confidence 89999999999999999999999999999865
No 450
>2h78_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC6014, pseudomonas aeruginosa PA01, PSI-2, structural genomics; HET: PG4; 2.20A {Pseudomonas aeruginosa} PDB: 3cum_A 3obb_A* 3q3c_A*
Probab=93.41 E-value=0.058 Score=47.51 Aligned_cols=35 Identities=11% Similarity=0.190 Sum_probs=31.9
Q ss_pred CCcEEEECCchhHHHHHHhhhccCceEEEEcCCCc
Q 018704 62 KPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRNH 96 (351)
Q Consensus 62 ~~~VvIIG~G~aGl~aA~~L~~~g~~v~vie~~~~ 96 (351)
.++|.|||+|..|...|..|.+.|++|+++|+++.
T Consensus 3 m~~I~iiG~G~mG~~~a~~l~~~G~~V~~~d~~~~ 37 (302)
T 2h78_A 3 MKQIAFIGLGHMGAPMATNLLKAGYLLNVFDLVQS 37 (302)
T ss_dssp CCEEEEECCSTTHHHHHHHHHHTTCEEEEECSSHH
T ss_pred CCEEEEEeecHHHHHHHHHHHhCCCeEEEEcCCHH
Confidence 36899999999999999999999999999998653
No 451
>3pqe_A L-LDH, L-lactate dehydrogenase; FBP, oxidoreductase; 2.20A {Bacillus subtilis} PDB: 3pqf_A* 3pqd_A*
Probab=93.35 E-value=0.077 Score=47.36 Aligned_cols=34 Identities=15% Similarity=0.341 Sum_probs=30.7
Q ss_pred CCcEEEECCchhHHHHHHhhhccCc--eEEEEcCCC
Q 018704 62 KPRVVVLGSGWAGCRLMKGIDTSLY--DVVCVSPRN 95 (351)
Q Consensus 62 ~~~VvIIG~G~aGl~aA~~L~~~g~--~v~vie~~~ 95 (351)
..+|+|||+|..|.+.|..|+..|+ +++++|...
T Consensus 5 ~~kI~ViGaG~vG~~~a~~l~~~~~~~~l~l~D~~~ 40 (326)
T 3pqe_A 5 VNKVALIGAGFVGSSYAFALINQGITDELVVIDVNK 40 (326)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSCH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCceEEEEecch
Confidence 4689999999999999999999887 899999854
No 452
>4huj_A Uncharacterized protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, dinucleotide-binding; 1.77A {Sinorhizobium meliloti}
Probab=93.33 E-value=0.046 Score=45.83 Aligned_cols=35 Identities=14% Similarity=0.203 Sum_probs=31.3
Q ss_pred CCcEEEECCchhHHHHHHhhhccCceEEE-EcCCCc
Q 018704 62 KPRVVVLGSGWAGCRLMKGIDTSLYDVVC-VSPRNH 96 (351)
Q Consensus 62 ~~~VvIIG~G~aGl~aA~~L~~~g~~v~v-ie~~~~ 96 (351)
.++|.|||+|..|.+.|..|.+.|++|++ +++++.
T Consensus 23 mmkI~IIG~G~mG~~la~~l~~~g~~V~~v~~r~~~ 58 (220)
T 4huj_A 23 MTTYAIIGAGAIGSALAERFTAAQIPAIIANSRGPA 58 (220)
T ss_dssp SCCEEEEECHHHHHHHHHHHHHTTCCEEEECTTCGG
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCEEEEEECCCHH
Confidence 36899999999999999999999999998 887654
No 453
>1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5
Probab=93.32 E-value=0.08 Score=45.90 Aligned_cols=34 Identities=15% Similarity=0.148 Sum_probs=31.1
Q ss_pred CCcEEEECCchhHHHHHHhhhccCceEEEEcCCC
Q 018704 62 KPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRN 95 (351)
Q Consensus 62 ~~~VvIIG~G~aGl~aA~~L~~~g~~v~vie~~~ 95 (351)
.++++|+|+|-+|.++|..|.+.|.+|++++++.
T Consensus 119 ~k~vlViGaGg~g~a~a~~L~~~G~~V~v~~R~~ 152 (271)
T 1nyt_A 119 GLRILLIGAGGASRGVLLPLLSLDCAVTITNRTV 152 (271)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSH
T ss_pred CCEEEEECCcHHHHHHHHHHHHcCCEEEEEECCH
Confidence 4689999999999999999999999999998854
No 454
>3hwr_A 2-dehydropantoate 2-reductase; YP_299159.1, PANE/APBA family ketopantoate reductase, struct genomics, joint center for structural genomics; HET: NDP BCN; 2.15A {Ralstonia eutropha}
Probab=93.32 E-value=0.062 Score=47.80 Aligned_cols=34 Identities=21% Similarity=0.403 Sum_probs=29.8
Q ss_pred CCCcEEEECCchhHHHHHHhhhccCceEEEEcCCC
Q 018704 61 EKPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRN 95 (351)
Q Consensus 61 ~~~~VvIIG~G~aGl~aA~~L~~~g~~v~vie~~~ 95 (351)
..++|+|||+|..|.+.|..|++.|++|+++ +++
T Consensus 18 ~~~kI~IiGaGa~G~~~a~~L~~~G~~V~l~-~~~ 51 (318)
T 3hwr_A 18 QGMKVAIMGAGAVGCYYGGMLARAGHEVILI-ARP 51 (318)
T ss_dssp --CEEEEESCSHHHHHHHHHHHHTTCEEEEE-CCH
T ss_pred cCCcEEEECcCHHHHHHHHHHHHCCCeEEEE-EcH
Confidence 4578999999999999999999999999999 654
No 455
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=93.30 E-value=0.076 Score=44.67 Aligned_cols=36 Identities=19% Similarity=0.281 Sum_probs=31.7
Q ss_pred CCCcEEEECC-chhHHHHHHhhhccCceEEEEcCCCc
Q 018704 61 EKPRVVVLGS-GWAGCRLMKGIDTSLYDVVCVSPRNH 96 (351)
Q Consensus 61 ~~~~VvIIG~-G~aGl~aA~~L~~~g~~v~vie~~~~ 96 (351)
+.++|+|.|| |..|...|..|.+.|++|++++++..
T Consensus 20 ~~~~ilVtGatG~iG~~l~~~L~~~G~~V~~~~R~~~ 56 (236)
T 3e8x_A 20 QGMRVLVVGANGKVARYLLSELKNKGHEPVAMVRNEE 56 (236)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSGG
T ss_pred CCCeEEEECCCChHHHHHHHHHHhCCCeEEEEECChH
Confidence 3578999997 99999999999999999999998643
No 456
>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}
Probab=93.23 E-value=0.078 Score=46.03 Aligned_cols=35 Identities=14% Similarity=0.266 Sum_probs=31.7
Q ss_pred CCcEEEECCchhHHHHHHhhhccCceEEEEcCCCc
Q 018704 62 KPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRNH 96 (351)
Q Consensus 62 ~~~VvIIG~G~aGl~aA~~L~~~g~~v~vie~~~~ 96 (351)
+++|+|.|+|..|...+..|.+.|++|+++++...
T Consensus 3 ~~~ilVtGaG~iG~~l~~~L~~~g~~V~~~~r~~~ 37 (286)
T 3gpi_A 3 LSKILIAGCGDLGLELARRLTAQGHEVTGLRRSAQ 37 (286)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTCCEEEEECTTS
T ss_pred CCcEEEECCCHHHHHHHHHHHHCCCEEEEEeCCcc
Confidence 36899999999999999999999999999998653
No 457
>3pdu_A 3-hydroxyisobutyrate dehydrogenase family protein; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R glyoxylate metabolism; HET: NAP; 1.89A {Geobacter sulfurreducens}
Probab=93.23 E-value=0.062 Score=46.98 Aligned_cols=34 Identities=18% Similarity=0.194 Sum_probs=31.4
Q ss_pred CcEEEECCchhHHHHHHhhhccCceEEEEcCCCc
Q 018704 63 PRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRNH 96 (351)
Q Consensus 63 ~~VvIIG~G~aGl~aA~~L~~~g~~v~vie~~~~ 96 (351)
++|.|||.|..|...|..|.+.|++|+++|+++.
T Consensus 2 ~~I~iiG~G~mG~~~a~~l~~~G~~V~~~dr~~~ 35 (287)
T 3pdu_A 2 TTYGFLGLGIMGGPMAANLVRAGFDVTVWNRNPA 35 (287)
T ss_dssp CCEEEECCSTTHHHHHHHHHHHTCCEEEECSSGG
T ss_pred CeEEEEccCHHHHHHHHHHHHCCCeEEEEcCCHH
Confidence 4799999999999999999999999999998754
No 458
>3ond_A Adenosylhomocysteinase; plant protein, enzyme-substrate complex, NAD cofactor, regul SAM-dependent methylation reactions; HET: NAD ADN; 1.17A {Lupinus luteus} PDB: 3one_A* 3onf_A*
Probab=93.22 E-value=0.071 Score=49.99 Aligned_cols=35 Identities=17% Similarity=0.091 Sum_probs=32.1
Q ss_pred CCCcEEEECCchhHHHHHHhhhccCceEEEEcCCC
Q 018704 61 EKPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRN 95 (351)
Q Consensus 61 ~~~~VvIIG~G~aGl~aA~~L~~~g~~v~vie~~~ 95 (351)
..+.|+|+|+|..|.++|..|+..|.+|+++|+++
T Consensus 264 ~GKtVvVtGaGgIG~aiA~~Laa~GA~Viv~D~~~ 298 (488)
T 3ond_A 264 AGKVAVVAGYGDVGKGCAAALKQAGARVIVTEIDP 298 (488)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred cCCEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCH
Confidence 35789999999999999999999999999999865
No 459
>1ryi_A Glycine oxidase; flavoprotein, protein-inhibitor complex, oxidoreductase; HET: FAD; 1.80A {Bacillus subtilis} SCOP: c.3.1.2 d.16.1.3 PDB: 3if9_A* 1ng4_A* 1ng3_A*
Probab=93.17 E-value=0.059 Score=48.86 Aligned_cols=34 Identities=26% Similarity=0.388 Sum_probs=30.5
Q ss_pred CeEEEECCChHHHHHHHHHHHHHHHHHHhhhcCCCCccEEEEEeCCCC
Q 018704 231 LHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEI 278 (351)
Q Consensus 231 ~~v~VvGgG~~a~e~a~~l~~~~~~~~~~~~~~~~~~~~v~~~~~~~~ 278 (351)
.+|+|||||.+|+-+|..|++.| .+|+++++...
T Consensus 18 ~dvvIIGgG~~Gl~~A~~La~~G--------------~~V~llE~~~~ 51 (382)
T 1ryi_A 18 YEAVVIGGGIIGSAIAYYLAKEN--------------KNTALFESGTM 51 (382)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTT--------------CCEEEECSSST
T ss_pred CCEEEECcCHHHHHHHHHHHhCC--------------CcEEEEeCCCC
Confidence 48999999999999999999876 89999999643
No 460
>1guz_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle, NAD; HET: NAD; 2.0A {Chlorobium vibrioforme} SCOP: c.2.1.5 d.162.1.1 PDB: 1gv1_A 1gv0_A*
Probab=93.16 E-value=0.086 Score=46.73 Aligned_cols=33 Identities=15% Similarity=0.255 Sum_probs=29.7
Q ss_pred cEEEECCchhHHHHHHhhhc--cCceEEEEcCCCc
Q 018704 64 RVVVLGSGWAGCRLMKGIDT--SLYDVVCVSPRNH 96 (351)
Q Consensus 64 ~VvIIG~G~aGl~aA~~L~~--~g~~v~vie~~~~ 96 (351)
+|+|||+|..|.+.|..|++ .+.+|+++|.++.
T Consensus 2 kI~VIGaG~vG~~la~~la~~~~g~~V~l~D~~~~ 36 (310)
T 1guz_A 2 KITVIGAGNVGATTAFRLAEKQLARELVLLDVVEG 36 (310)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSSS
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCChh
Confidence 79999999999999999988 4789999998754
No 461
>3p7m_A Malate dehydrogenase; putative dehydrogenase, enzyme, structural genomics, center structural genomics of infectious diseases, csgid; 2.20A {Francisella tularensis}
Probab=93.16 E-value=0.097 Score=46.61 Aligned_cols=35 Identities=20% Similarity=0.241 Sum_probs=31.3
Q ss_pred CCcEEEECCchhHHHHHHhhhccCc-eEEEEcCCCc
Q 018704 62 KPRVVVLGSGWAGCRLMKGIDTSLY-DVVCVSPRNH 96 (351)
Q Consensus 62 ~~~VvIIG~G~aGl~aA~~L~~~g~-~v~vie~~~~ 96 (351)
..+|+|||+|..|.+.|..|+..++ +++++|..+.
T Consensus 5 ~~kI~iiGaG~vG~~~a~~l~~~~~~~v~l~Di~~~ 40 (321)
T 3p7m_A 5 RKKITLVGAGNIGGTLAHLALIKQLGDVVLFDIAQG 40 (321)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSSS
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCceEEEEeCChH
Confidence 3689999999999999999998887 9999998664
No 462
>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*
Probab=93.10 E-value=0.092 Score=46.61 Aligned_cols=35 Identities=17% Similarity=0.339 Sum_probs=31.9
Q ss_pred CCcEEEECCchhHHHHHHhhhccCc--eEEEEcCCCc
Q 018704 62 KPRVVVLGSGWAGCRLMKGIDTSLY--DVVCVSPRNH 96 (351)
Q Consensus 62 ~~~VvIIG~G~aGl~aA~~L~~~g~--~v~vie~~~~ 96 (351)
.++|.|||.|..|-+.|..|.+.|+ +|+++|+++.
T Consensus 33 ~~kI~IIG~G~mG~slA~~l~~~G~~~~V~~~dr~~~ 69 (314)
T 3ggo_A 33 MQNVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDINPE 69 (314)
T ss_dssp CSEEEEESCSHHHHHHHHHHHHTTCCSEEEEECSCHH
T ss_pred CCEEEEEeeCHHHHHHHHHHHhCCCCCEEEEEECCHH
Confidence 4689999999999999999999999 9999998653
No 463
>1vpd_A Tartronate semialdehyde reductase; structural genomics, MCSG, protein structure initiative, PSI, midwest center for structural genomics; HET: MSE TLA; 1.65A {Salmonella typhimurium} SCOP: a.100.1.1 c.2.1.6
Probab=93.05 E-value=0.068 Score=46.88 Aligned_cols=34 Identities=21% Similarity=0.269 Sum_probs=31.1
Q ss_pred CcEEEECCchhHHHHHHhhhccCceEEEEcCCCc
Q 018704 63 PRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRNH 96 (351)
Q Consensus 63 ~~VvIIG~G~aGl~aA~~L~~~g~~v~vie~~~~ 96 (351)
++|.|||+|..|...|..|.+.|++|+++|+++.
T Consensus 6 m~i~iiG~G~~G~~~a~~l~~~g~~V~~~~~~~~ 39 (299)
T 1vpd_A 6 MKVGFIGLGIMGKPMSKNLLKAGYSLVVSDRNPE 39 (299)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTCEEEEECSCHH
T ss_pred ceEEEECchHHHHHHHHHHHhCCCEEEEEeCCHH
Confidence 5899999999999999999999999999998643
No 464
>3hwr_A 2-dehydropantoate 2-reductase; YP_299159.1, PANE/APBA family ketopantoate reductase, struct genomics, joint center for structural genomics; HET: NDP BCN; 2.15A {Ralstonia eutropha}
Probab=93.03 E-value=0.21 Score=44.25 Aligned_cols=77 Identities=18% Similarity=0.268 Sum_probs=46.7
Q ss_pred CeEEEECCChHHHHHHHHHHHHHHHHHHhhhcCCCCccEEEEEeCCCCCCCCcHHHHHHHHHHhhhcCcEEEcCeEEEEe
Q 018704 231 LHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEILSSFDDRLRHYATTQLSKSGVRLVRGIVKDVD 310 (351)
Q Consensus 231 ~~v~VvGgG~~a~e~a~~l~~~~~~~~~~~~~~~~~~~~v~~~~~~~~l~~~~~~~~~~~~~~l~~~gV~~~~~~v~~v~ 310 (351)
.+|+|||+|..|.-+|..|++.| .+|+++ ++ ++.. +.+.+.|+++.........
T Consensus 20 ~kI~IiGaGa~G~~~a~~L~~~G--------------~~V~l~-~~-------~~~~----~~i~~~g~~~~~~~~~~~~ 73 (318)
T 3hwr_A 20 MKVAIMGAGAVGCYYGGMLARAG--------------HEVILI-AR-------PQHV----QAIEATGLRLETQSFDEQV 73 (318)
T ss_dssp CEEEEESCSHHHHHHHHHHHHTT--------------CEEEEE-CC-------HHHH----HHHHHHCEEEECSSCEEEE
T ss_pred CcEEEECcCHHHHHHHHHHHHCC--------------CeEEEE-Ec-------HhHH----HHHHhCCeEEEcCCCcEEE
Confidence 39999999999999999998866 789998 53 1222 3344456665432111100
Q ss_pred CCeEEecCCcE-EeccEEEEecCCC
Q 018704 311 SQKLILNDGTE-VPYGLLVWSTGVG 334 (351)
Q Consensus 311 ~~~v~~~~g~~-~~~D~vi~a~G~~ 334 (351)
.-.+ ..+-.. -.+|.||+|+-..
T Consensus 74 ~~~~-~~~~~~~~~~D~vilavk~~ 97 (318)
T 3hwr_A 74 KVSA-SSDPSAVQGADLVLFCVKST 97 (318)
T ss_dssp CCEE-ESCGGGGTTCSEEEECCCGG
T ss_pred eeee-eCCHHHcCCCCEEEEEcccc
Confidence 1111 122122 2589999998654
No 465
>3ka7_A Oxidoreductase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; HET: FAD; 1.80A {Methanosarcina mazei}
Probab=93.03 E-value=0.085 Score=48.59 Aligned_cols=32 Identities=28% Similarity=0.302 Sum_probs=29.5
Q ss_pred eEEEECCChHHHHHHHHHHHHHHHHHHhhhcCCCCccEEEEEeCCC
Q 018704 232 HCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANE 277 (351)
Q Consensus 232 ~v~VvGgG~~a~e~a~~l~~~~~~~~~~~~~~~~~~~~v~~~~~~~ 277 (351)
+|+|||||.+|+-+|..|++.| .+|+++++++
T Consensus 2 dVvVIGaGiaGLsaA~~La~~G--------------~~V~vlE~~~ 33 (425)
T 3ka7_A 2 KTVVIGAGLGGLLSAARLSKAG--------------HEVEVFERLP 33 (425)
T ss_dssp EEEEECCBHHHHHHHHHHHHTT--------------CEEEEECSSS
T ss_pred cEEEECCCHHHHHHHHHHHhCC--------------CceEEEeCCC
Confidence 7999999999999999999877 8999999964
No 466
>2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus}
Probab=93.01 E-value=0.1 Score=45.96 Aligned_cols=34 Identities=12% Similarity=0.169 Sum_probs=31.1
Q ss_pred CCcEEEECCchhHHHHHHhhhccCc-eEEEEcCCC
Q 018704 62 KPRVVVLGSGWAGCRLMKGIDTSLY-DVVCVSPRN 95 (351)
Q Consensus 62 ~~~VvIIG~G~aGl~aA~~L~~~g~-~v~vie~~~ 95 (351)
.++|+|||+|-+|.++|..|.+.|. +|+|+++..
T Consensus 141 ~~~vlVlGaGg~g~aia~~L~~~G~~~V~v~nR~~ 175 (297)
T 2egg_A 141 GKRILVIGAGGGARGIYFSLLSTAAERIDMANRTV 175 (297)
T ss_dssp TCEEEEECCSHHHHHHHHHHHTTTCSEEEEECSSH
T ss_pred CCEEEEECcHHHHHHHHHHHHHCCCCEEEEEeCCH
Confidence 4689999999999999999999998 899999864
No 467
>3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A*
Probab=92.98 E-value=0.1 Score=45.12 Aligned_cols=35 Identities=14% Similarity=0.200 Sum_probs=31.9
Q ss_pred CCcEEEECCchhHHHHHHhhhccCceEEEEcCCCc
Q 018704 62 KPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRNH 96 (351)
Q Consensus 62 ~~~VvIIG~G~aGl~aA~~L~~~g~~v~vie~~~~ 96 (351)
.++++|||+|-+|-++|..|.+.|.+|+|+.|...
T Consensus 118 ~k~vlvlGaGGaaraia~~L~~~G~~v~V~nRt~~ 152 (269)
T 3phh_A 118 YQNALILGAGGSAKALACELKKQGLQVSVLNRSSR 152 (269)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCT
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHH
Confidence 57999999999999999999999988999998643
No 468
>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A*
Probab=92.97 E-value=0.096 Score=43.32 Aligned_cols=33 Identities=33% Similarity=0.369 Sum_probs=30.2
Q ss_pred cEEEEC-CchhHHHHHHhhhccCceEEEEcCCCc
Q 018704 64 RVVVLG-SGWAGCRLMKGIDTSLYDVVCVSPRNH 96 (351)
Q Consensus 64 ~VvIIG-~G~aGl~aA~~L~~~g~~v~vie~~~~ 96 (351)
+|+||| +|..|...|..|.+.|++|+++++++.
T Consensus 2 ~i~iiGa~G~~G~~ia~~l~~~g~~V~~~~r~~~ 35 (212)
T 1jay_A 2 RVALLGGTGNLGKGLALRLATLGHEIVVGSRREE 35 (212)
T ss_dssp EEEEETTTSHHHHHHHHHHHTTTCEEEEEESSHH
T ss_pred eEEEEcCCCHHHHHHHHHHHHCCCEEEEEeCCHH
Confidence 699999 999999999999999999999998643
No 469
>2q3e_A UDP-glucose 6-dehydrogenase; hexamer, structural genomics, S genomics consortium, SGC, oxidoreductase; HET: NAD UPG; 2.00A {Homo sapiens} PDB: 2qg4_A* 3khu_A* 3itk_A* 3tdk_A* 3ptz_A* 3prj_A* 3tf5_A
Probab=92.89 E-value=0.075 Score=50.03 Aligned_cols=33 Identities=18% Similarity=0.302 Sum_probs=30.5
Q ss_pred CcEEEECCchhHHHHHHhhhcc--CceEEEEcCCC
Q 018704 63 PRVVVLGSGWAGCRLMKGIDTS--LYDVVCVSPRN 95 (351)
Q Consensus 63 ~~VvIIG~G~aGl~aA~~L~~~--g~~v~vie~~~ 95 (351)
++|.|||.|..|+..|..|++. |++|+++|+++
T Consensus 6 mkI~VIG~G~mG~~lA~~La~~g~G~~V~~~d~~~ 40 (467)
T 2q3e_A 6 KKICCIGAGYVGGPTCSVIAHMCPEIRVTVVDVNE 40 (467)
T ss_dssp CEEEEECCSTTHHHHHHHHHHHCTTSEEEEECSCH
T ss_pred cEEEEECCCHHHHHHHHHHHhcCCCCEEEEEECCH
Confidence 5899999999999999999998 89999999764
No 470
>3qsg_A NAD-binding phosphogluconate dehydrogenase-like P; structural genomics, PSI-biology, midwest center for structu genomics; 1.90A {Alicyclobacillus acidocaldarius subsp}
Probab=92.89 E-value=0.079 Score=46.99 Aligned_cols=33 Identities=15% Similarity=0.220 Sum_probs=30.6
Q ss_pred CCcEEEECCchhHHHHHHhhhccCc-eEEEEcCC
Q 018704 62 KPRVVVLGSGWAGCRLMKGIDTSLY-DVVCVSPR 94 (351)
Q Consensus 62 ~~~VvIIG~G~aGl~aA~~L~~~g~-~v~vie~~ 94 (351)
.++|.|||.|..|...|..|.+.|+ +|+++|++
T Consensus 24 ~~~I~iIG~G~mG~~~A~~L~~~G~~~V~~~dr~ 57 (312)
T 3qsg_A 24 AMKLGFIGFGEAASAIASGLRQAGAIDMAAYDAA 57 (312)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHHSCCEEEEECSS
T ss_pred CCEEEEECccHHHHHHHHHHHHCCCCeEEEEcCC
Confidence 4689999999999999999999999 99999996
No 471
>3gvp_A Adenosylhomocysteinase 3; protein CO-factor complex, hydrolase, NAD, one-carbon metabolism, phosphoprotein; HET: NAD; 2.25A {Homo sapiens} PDB: 3mtg_A*
Probab=92.89 E-value=0.088 Score=48.52 Aligned_cols=35 Identities=20% Similarity=0.063 Sum_probs=32.2
Q ss_pred CCCcEEEECCchhHHHHHHhhhccCceEEEEcCCC
Q 018704 61 EKPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRN 95 (351)
Q Consensus 61 ~~~~VvIIG~G~aGl~aA~~L~~~g~~v~vie~~~ 95 (351)
..+.|+|||.|..|..+|..|+..|.+|+++|+++
T Consensus 219 ~GktV~ViG~G~IGk~vA~~Lra~Ga~Viv~D~dp 253 (435)
T 3gvp_A 219 GGKQVVVCGYGEVGKGCCAALKAMGSIVYVTEIDP 253 (435)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred cCCEEEEEeeCHHHHHHHHHHHHCCCEEEEEeCCh
Confidence 34789999999999999999999999999999865
No 472
>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}
Probab=92.87 E-value=0.096 Score=45.96 Aligned_cols=35 Identities=20% Similarity=0.208 Sum_probs=31.9
Q ss_pred CCCcEEEECCchhHHHHHHhhhccCceEEEEcCCC
Q 018704 61 EKPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRN 95 (351)
Q Consensus 61 ~~~~VvIIG~G~aGl~aA~~L~~~g~~v~vie~~~ 95 (351)
..++|.|||+|..|..+|..|...|.+|+++|+..
T Consensus 154 ~g~~v~IiG~G~iG~~~a~~l~~~G~~V~~~dr~~ 188 (293)
T 3d4o_A 154 HGANVAVLGLGRVGMSVARKFAALGAKVKVGARES 188 (293)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSH
T ss_pred CCCEEEEEeeCHHHHHHHHHHHhCCCEEEEEECCH
Confidence 35789999999999999999999999999999854
No 473
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=92.87 E-value=0.13 Score=40.36 Aligned_cols=35 Identities=20% Similarity=0.190 Sum_probs=30.2
Q ss_pred cccCeEEEECCChHHHHHHHHHHHHHHHHHHhhhcCCCCccEEEEEeCC
Q 018704 228 SRLLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEAN 276 (351)
Q Consensus 228 ~~~~~v~VvGgG~~a~e~a~~l~~~~~~~~~~~~~~~~~~~~v~~~~~~ 276 (351)
...++|+|+|+|.+|..++..|...+ .+|++++++
T Consensus 17 ~~~~~v~IiG~G~iG~~la~~L~~~g--------------~~V~vid~~ 51 (155)
T 2g1u_A 17 QKSKYIVIFGCGRLGSLIANLASSSG--------------HSVVVVDKN 51 (155)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHHTT--------------CEEEEEESC
T ss_pred cCCCcEEEECCCHHHHHHHHHHHhCC--------------CeEEEEECC
Confidence 34469999999999999999998776 789999885
No 474
>2uyy_A N-PAC protein; long-chain dehydrogenase, cytokine; HET: NA7; 2.5A {Homo sapiens}
Probab=92.86 E-value=0.12 Score=45.86 Aligned_cols=35 Identities=14% Similarity=0.177 Sum_probs=31.6
Q ss_pred CCcEEEECCchhHHHHHHhhhccCceEEEEcCCCc
Q 018704 62 KPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRNH 96 (351)
Q Consensus 62 ~~~VvIIG~G~aGl~aA~~L~~~g~~v~vie~~~~ 96 (351)
..+|.|||+|..|...|..|.+.|++|+++|+++.
T Consensus 30 ~~~I~iIG~G~mG~~~a~~l~~~g~~V~~~~~~~~ 64 (316)
T 2uyy_A 30 DKKIGFLGLGLMGSGIVSNLLKMGHTVTVWNRTAE 64 (316)
T ss_dssp SSCEEEECCSHHHHHHHHHHHHTTCCEEEECSSGG
T ss_pred CCeEEEEcccHHHHHHHHHHHhCCCEEEEEeCCHH
Confidence 36899999999999999999999999999998654
No 475
>2iid_A L-amino-acid oxidase; flavoenzyme, FAD binding domain, reaction mechanism, sustrat binding, oxidoreductase; HET: NAG FUC PHE FAD; 1.80A {Calloselasma rhodostoma} SCOP: c.3.1.2 d.16.1.5 PDB: 1f8s_A* 1f8r_A* 1reo_A* 1tdk_A* 1tdn_A* 1tdo_A* 3kve_A* 4e0v_A*
Probab=92.85 E-value=0.1 Score=49.25 Aligned_cols=34 Identities=35% Similarity=0.426 Sum_probs=30.4
Q ss_pred cCeEEEECCChHHHHHHHHHHHHHHHHHHhhhcCCCCccEEEEEeCCC
Q 018704 230 LLHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANE 277 (351)
Q Consensus 230 ~~~v~VvGgG~~a~e~a~~l~~~~~~~~~~~~~~~~~~~~v~~~~~~~ 277 (351)
.++|+|||||.+|+.+|..|.+.| .+|+++++..
T Consensus 33 ~~~v~IiGaG~~Gl~aA~~l~~~g--------------~~v~vlE~~~ 66 (498)
T 2iid_A 33 PKHVVIVGAGMAGLSAAYVLAGAG--------------HQVTVLEASE 66 (498)
T ss_dssp CCEEEEECCBHHHHHHHHHHHHHT--------------CEEEEECSSS
T ss_pred CCCEEEECCCHHHHHHHHHHHhCC--------------CeEEEEECCC
Confidence 358999999999999999999877 8999999863
No 476
>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}
Probab=92.84 E-value=0.096 Score=46.14 Aligned_cols=35 Identities=20% Similarity=0.245 Sum_probs=31.9
Q ss_pred CCCcEEEECCchhHHHHHHhhhccCceEEEEcCCC
Q 018704 61 EKPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRN 95 (351)
Q Consensus 61 ~~~~VvIIG~G~aGl~aA~~L~~~g~~v~vie~~~ 95 (351)
..++|.|||+|..|..+|..|...|.+|+++|+..
T Consensus 156 ~g~~v~IiG~G~iG~~~a~~l~~~G~~V~~~d~~~ 190 (300)
T 2rir_A 156 HGSQVAVLGLGRTGMTIARTFAALGANVKVGARSS 190 (300)
T ss_dssp TTSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSH
T ss_pred CCCEEEEEcccHHHHHHHHHHHHCCCEEEEEECCH
Confidence 35789999999999999999999999999999854
No 477
>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}
Probab=92.77 E-value=0.09 Score=47.62 Aligned_cols=35 Identities=11% Similarity=0.230 Sum_probs=32.2
Q ss_pred CCcEEEECCchhHHHHHHhhhccCceEEEEcCCCc
Q 018704 62 KPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRNH 96 (351)
Q Consensus 62 ~~~VvIIG~G~aGl~aA~~L~~~g~~v~vie~~~~ 96 (351)
.++|.|||.|..|...|..|.+.|++|+++|+++.
T Consensus 22 ~mkIgiIGlG~mG~~~A~~L~~~G~~V~v~dr~~~ 56 (358)
T 4e21_A 22 SMQIGMIGLGRMGADMVRRLRKGGHECVVYDLNVN 56 (358)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHH
T ss_pred CCEEEEECchHHHHHHHHHHHhCCCEEEEEeCCHH
Confidence 47899999999999999999999999999998653
No 478
>4aj2_A L-lactate dehydrogenase A chain; oxidoreductase-inhibitor complex, fragment-based LEAD genera inhibitors; HET: 52C; 1.75A {Rattus norvegicus} PDB: 4aj1_A* 4aje_A* 4ajh_A* 4aji_A* 4ajj_A* 4ajk_A* 4ajl_A* 4ajn_A* 4ajo_A* 4al4_A* 4aj4_A* 4ajp_A* 1i10_A* 3h3f_A* 9ldt_A* 9ldb_A* 1t2f_A* 1i0z_A* 5ldh_A* 1ldm_A* ...
Probab=92.76 E-value=0.11 Score=46.49 Aligned_cols=36 Identities=17% Similarity=0.169 Sum_probs=31.4
Q ss_pred CCCCcEEEECCchhHHHHHHhhhccCc--eEEEEcCCC
Q 018704 60 NEKPRVVVLGSGWAGCRLMKGIDTSLY--DVVCVSPRN 95 (351)
Q Consensus 60 ~~~~~VvIIG~G~aGl~aA~~L~~~g~--~v~vie~~~ 95 (351)
....+|+|||+|..|.++|..|...|+ +++|+|...
T Consensus 17 ~~~~kV~ViGaG~vG~~~a~~l~~~~~~~el~L~Di~~ 54 (331)
T 4aj2_A 17 VPQNKITVVGVGAVGMACAISILMKDLADELALVDVIE 54 (331)
T ss_dssp CCSSEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSCH
T ss_pred CCCCEEEEECCCHHHHHHHHHHHhCCCCceEEEEeCCh
Confidence 345799999999999999999998887 899999854
No 479
>2i6t_A Ubiquitin-conjugating enzyme E2-like isoform A; L-lactate dehydrogenase, oxidoreductase, ubiquitin-protein L unknown function; 2.10A {Homo sapiens} PDB: 3dl2_A
Probab=92.76 E-value=0.092 Score=46.36 Aligned_cols=34 Identities=18% Similarity=0.217 Sum_probs=30.1
Q ss_pred CCcEEEECCchhHHHHHHhhhccCc--eEEEEcCCC
Q 018704 62 KPRVVVLGSGWAGCRLMKGIDTSLY--DVVCVSPRN 95 (351)
Q Consensus 62 ~~~VvIIG~G~aGl~aA~~L~~~g~--~v~vie~~~ 95 (351)
..+|+|||+|..|.+.|..|...|+ +++|+|.++
T Consensus 14 ~~kV~ViGaG~vG~~~a~~l~~~g~~~ev~L~Di~~ 49 (303)
T 2i6t_A 14 VNKITVVGGGELGIACTLAISAKGIADRLVLLDLSE 49 (303)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECCC-
T ss_pred CCEEEEECCCHHHHHHHHHHHhcCCCCEEEEEcCCc
Confidence 3689999999999999999998888 899999865
No 480
>3vku_A L-LDH, L-lactate dehydrogenase; rossmann fold, NADH binding, oxidoreductase; 1.96A {Lactobacillus casei} PDB: 2zqz_A 2zqy_A 3vkv_A* 1llc_A*
Probab=92.73 E-value=0.094 Score=46.77 Aligned_cols=35 Identities=14% Similarity=0.230 Sum_probs=30.9
Q ss_pred CCCcEEEECCchhHHHHHHhhhccCc--eEEEEcCCC
Q 018704 61 EKPRVVVLGSGWAGCRLMKGIDTSLY--DVVCVSPRN 95 (351)
Q Consensus 61 ~~~~VvIIG~G~aGl~aA~~L~~~g~--~v~vie~~~ 95 (351)
...+|+|||+|..|.++|..|...++ +++++|...
T Consensus 8 ~~~kV~ViGaG~vG~~~a~~l~~~~~~~el~l~D~~~ 44 (326)
T 3vku_A 8 DHQKVILVGDGAVGSSYAYAMVLQGIAQEIGIVDIFK 44 (326)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSCH
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCCeEEEEeCCh
Confidence 34689999999999999999998877 899999854
No 481
>3nrn_A Uncharacterized protein PF1083; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: AMP; 2.10A {Pyrococcus furiosus}
Probab=92.72 E-value=0.27 Score=45.27 Aligned_cols=35 Identities=17% Similarity=0.243 Sum_probs=32.8
Q ss_pred CcEEEECCchhHHHHHHhhhccCceEEEEcCCCcc
Q 018704 63 PRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRNHM 97 (351)
Q Consensus 63 ~~VvIIG~G~aGl~aA~~L~~~g~~v~vie~~~~~ 97 (351)
+||+|||||++||+||+.|++.|++|+|+|+++..
T Consensus 1 ~dVvVIGaGiaGLsaA~~La~~G~~V~vlE~~~~~ 35 (421)
T 3nrn_A 1 MRAVVVGAGLGGLLAGAFLARNGHEIIVLEKSAMI 35 (421)
T ss_dssp CEEEEESCSHHHHHHHHHHHHTTCEEEEECSSSSS
T ss_pred CcEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCCC
Confidence 48999999999999999999999999999998764
No 482
>3d0o_A L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, glycolysis, NAD, oxidoreductase, phosphoprotein; 1.80A {Staphylococcus aureus} PDB: 3d4p_A* 3h3j_A*
Probab=92.70 E-value=0.095 Score=46.59 Aligned_cols=34 Identities=18% Similarity=0.312 Sum_probs=30.0
Q ss_pred CCcEEEECCchhHHHHHHhhhccCc--eEEEEcCCC
Q 018704 62 KPRVVVLGSGWAGCRLMKGIDTSLY--DVVCVSPRN 95 (351)
Q Consensus 62 ~~~VvIIG~G~aGl~aA~~L~~~g~--~v~vie~~~ 95 (351)
+.+|+|||+|..|.+.|..|...++ +++++|.++
T Consensus 6 ~~KI~IIGaG~vG~~la~~l~~~~~~~ei~L~Di~~ 41 (317)
T 3d0o_A 6 GNKVVLIGNGAVGSSYAFSLVNQSIVDELVIIDLDT 41 (317)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCSCSEEEEECSCH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCCh
Confidence 4699999999999999999998775 799999754
No 483
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=92.67 E-value=0.21 Score=38.38 Aligned_cols=75 Identities=24% Similarity=0.270 Sum_probs=47.3
Q ss_pred CeEEEECCChHHHHHHHHHHHHHHHHHHhhhcCCCCccEEEEEeCCCCCCCCcHHHHHHHHHHhhhcCcEEEcCeEEEEe
Q 018704 231 LHCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEILSSFDDRLRHYATTQLSKSGVRLVRGIVKDVD 310 (351)
Q Consensus 231 ~~v~VvGgG~~a~e~a~~l~~~~~~~~~~~~~~~~~~~~v~~~~~~~~l~~~~~~~~~~~~~~l~~~gV~~~~~~v~~v~ 310 (351)
++++|+|.|..|..+|..|...+ .+|++++++ ++..+ .+++.|+.++.+...+.+
T Consensus 8 ~~viIiG~G~~G~~la~~L~~~g--------------~~v~vid~~-------~~~~~----~~~~~g~~~i~gd~~~~~ 62 (140)
T 3fwz_A 8 NHALLVGYGRVGSLLGEKLLASD--------------IPLVVIETS-------RTRVD----ELRERGVRAVLGNAANEE 62 (140)
T ss_dssp SCEEEECCSHHHHHHHHHHHHTT--------------CCEEEEESC-------HHHHH----HHHHTTCEEEESCTTSHH
T ss_pred CCEEEECcCHHHHHHHHHHHHCC--------------CCEEEEECC-------HHHHH----HHHHcCCCEEECCCCCHH
Confidence 48999999999999999998876 899999985 22222 334467777665211100
Q ss_pred CCeEEecCCcEEeccEEEEecCCC
Q 018704 311 SQKLILNDGTEVPYGLLVWSTGVG 334 (351)
Q Consensus 311 ~~~v~~~~g~~~~~D~vi~a~G~~ 334 (351)
.+..-..-.+|.||.+++..
T Consensus 63 ----~l~~a~i~~ad~vi~~~~~~ 82 (140)
T 3fwz_A 63 ----IMQLAHLECAKWLILTIPNG 82 (140)
T ss_dssp ----HHHHTTGGGCSEEEECCSCH
T ss_pred ----HHHhcCcccCCEEEEECCCh
Confidence 00000012477777777643
No 484
>1txg_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; oxidoreductase; 1.70A {Archaeoglobus fulgidus} SCOP: a.100.1.6 c.2.1.6
Probab=92.67 E-value=0.085 Score=47.05 Aligned_cols=30 Identities=23% Similarity=0.206 Sum_probs=29.0
Q ss_pred cEEEECCchhHHHHHHhhhccCceEEEEcC
Q 018704 64 RVVVLGSGWAGCRLMKGIDTSLYDVVCVSP 93 (351)
Q Consensus 64 ~VvIIG~G~aGl~aA~~L~~~g~~v~vie~ 93 (351)
+|.|||+|..|.+.|..|.+.|++|+++++
T Consensus 2 ~I~iiG~G~mG~~~a~~L~~~g~~V~~~~r 31 (335)
T 1txg_A 2 IVSILGAGAMGSALSVPLVDNGNEVRIWGT 31 (335)
T ss_dssp EEEEESCCHHHHHHHHHHHHHCCEEEEECC
T ss_pred EEEEECcCHHHHHHHHHHHhCCCeEEEEEc
Confidence 699999999999999999999999999998
No 485
>2pv7_A T-protein [includes: chorismate mutase (EC 5.4.99 and prephenate dehydrogenase (EC...; 1574749, chorismate mutase type II; HET: MSE TYR NAD; 2.00A {Haemophilus influenzae} SCOP: a.100.1.12 c.2.1.6
Probab=92.65 E-value=0.15 Score=44.74 Aligned_cols=35 Identities=17% Similarity=0.307 Sum_probs=31.9
Q ss_pred CCcEEEEC-CchhHHHHHHhhhccCceEEEEcCCCc
Q 018704 62 KPRVVVLG-SGWAGCRLMKGIDTSLYDVVCVSPRNH 96 (351)
Q Consensus 62 ~~~VvIIG-~G~aGl~aA~~L~~~g~~v~vie~~~~ 96 (351)
..+|.||| +|..|.+.|..|++.|++|+++++++.
T Consensus 21 ~~~I~iIGg~G~mG~~la~~l~~~G~~V~~~~~~~~ 56 (298)
T 2pv7_A 21 IHKIVIVGGYGKLGGLFARYLRASGYPISILDREDW 56 (298)
T ss_dssp CCCEEEETTTSHHHHHHHHHHHTTTCCEEEECTTCG
T ss_pred CCEEEEEcCCCHHHHHHHHHHHhCCCeEEEEECCcc
Confidence 35799999 999999999999999999999998754
No 486
>2we8_A Xanthine dehydrogenase; oxidoreductase; 2.30A {Mycobacterium smegmatis} PDB: 2we7_A
Probab=92.62 E-value=0.12 Score=47.20 Aligned_cols=36 Identities=19% Similarity=0.216 Sum_probs=33.4
Q ss_pred CCcEEEECCchhHHHHHHhhhccCceEEEEcCCCcc
Q 018704 62 KPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRNHM 97 (351)
Q Consensus 62 ~~~VvIIG~G~aGl~aA~~L~~~g~~v~vie~~~~~ 97 (351)
.++++|+|+|..|.+.|..++..|++|+++|+++.+
T Consensus 204 ~~rL~IfGAGhva~ala~~a~~lg~~V~v~D~R~~~ 239 (386)
T 2we8_A 204 RPRMLVFGAIDFAAAVAQQGAFLGYRVTVCDARPVF 239 (386)
T ss_dssp CCEEEEECCSTHHHHHHHHHHHTTCEEEEEESCTTT
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCEEEEECCchhh
Confidence 479999999999999999999999999999998764
No 487
>4hv4_A UDP-N-acetylmuramate--L-alanine ligase; MURC, yersinia pestis peptidoglycan synthesis; HET: AMP; 2.25A {Yersinia pestis} PDB: 2f00_A
Probab=92.59 E-value=0.11 Score=49.28 Aligned_cols=78 Identities=18% Similarity=0.166 Sum_probs=0.0
Q ss_pred hcccCeEEEECCChHHHH-HHHHHHHHHHHHHHhhhcCCCCccEEEEEeCCCCCCCCcHHHHHHHHHHhhhcCcEEEcCe
Q 018704 227 KSRLLHCVVVGGGPTGVE-FSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEILSSFDDRLRHYATTQLSKSGVRLVRGI 305 (351)
Q Consensus 227 ~~~~~~v~VvGgG~~a~e-~a~~l~~~~~~~~~~~~~~~~~~~~v~~~~~~~~l~~~~~~~~~~~~~~l~~~gV~~~~~~ 305 (351)
..+.++|.|||-|-+|+- +|..|.+.| .+|+..+.... ...+.|++.||+++.|.
T Consensus 19 ~~~~~~v~viGiG~sG~s~~A~~l~~~G--------------~~V~~~D~~~~----------~~~~~l~~~gi~~~~g~ 74 (494)
T 4hv4_A 19 MRRVRHIHFVGIGGAGMGGIAEVLANEG--------------YQISGSDLAPN----------SVTQHLTALGAQIYFHH 74 (494)
T ss_dssp ---CCEEEEETTTSTTHHHHHHHHHHTT--------------CEEEEECSSCC----------HHHHHHHHTTCEEESSC
T ss_pred hccCCEEEEEEEcHhhHHHHHHHHHhCC--------------CeEEEEECCCC----------HHHHHHHHCCCEEECCC
Q ss_pred -EEEEeCCeEEecCCcEEeccEEEEecCCCCc-cccc
Q 018704 306 -VKDVDSQKLILNDGTEVPYGLLVWSTGVGPS-TLVK 340 (351)
Q Consensus 306 -v~~v~~~~v~~~~g~~~~~D~vi~a~G~~p~-~~~~ 340 (351)
...+. .+|.||+++|..++ +.+.
T Consensus 75 ~~~~~~------------~~d~vV~Spgi~~~~p~~~ 99 (494)
T 4hv4_A 75 RPENVL------------DASVVVVSTAISADNPEIV 99 (494)
T ss_dssp CGGGGT------------TCSEEEECTTSCTTCHHHH
T ss_pred CHHHcC------------CCCEEEECCCCCCCCHHHH
No 488
>3ego_A Probable 2-dehydropantoate 2-reductase; structural genomics, PANE, unknown function, cytoplasm, NADP, oxidoreductase; 1.90A {Bacillus subtilis}
Probab=92.56 E-value=0.19 Score=44.38 Aligned_cols=74 Identities=20% Similarity=0.300 Sum_probs=46.1
Q ss_pred eEEEECCChHHHHHHHHHHHHHHHHHHhhhcCCCCccEEEEEeCCCCCCCCcHHHHHHHHHHhhhcCcEEEcCeEEEEeC
Q 018704 232 HCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEILSSFDDRLRHYATTQLSKSGVRLVRGIVKDVDS 311 (351)
Q Consensus 232 ~v~VvGgG~~a~e~a~~l~~~~~~~~~~~~~~~~~~~~v~~~~~~~~l~~~~~~~~~~~~~~l~~~gV~~~~~~v~~v~~ 311 (351)
+|+|||+|.+|.-+|..|. .+ .+|+++.|+. +-. +.+++.|+++.........
T Consensus 4 kI~IiGaGa~G~~~a~~L~-~g--------------~~V~~~~r~~-------~~~----~~l~~~G~~~~~~~~~~~~- 56 (307)
T 3ego_A 4 KIGIIGGGSVGLLCAYYLS-LY--------------HDVTVVTRRQ-------EQA----AAIQSEGIRLYKGGEEFRA- 56 (307)
T ss_dssp EEEEECCSHHHHHHHHHHH-TT--------------SEEEEECSCH-------HHH----HHHHHHCEEEEETTEEEEE-
T ss_pred EEEEECCCHHHHHHHHHHh-cC--------------CceEEEECCH-------HHH----HHHHhCCceEecCCCeecc-
Confidence 8999999999999999988 65 8999998841 211 3345567776532111111
Q ss_pred CeEEecCCcEEeccEEEEecCC
Q 018704 312 QKLILNDGTEVPYGLLVWSTGV 333 (351)
Q Consensus 312 ~~v~~~~g~~~~~D~vi~a~G~ 333 (351)
.+.......-++|.||+|+-.
T Consensus 57 -~~~~~~~~~~~~D~vilavK~ 77 (307)
T 3ego_A 57 -DCSADTSINSDFDLLVVTVKQ 77 (307)
T ss_dssp -CCEEESSCCSCCSEEEECCCG
T ss_pred -cccccccccCCCCEEEEEeCH
Confidence 111111112358999999753
No 489
>1a5z_A L-lactate dehydrogenase; oxidoreductase, glycolysis, hyperthermophiles, thermotoga MA protein stability; HET: FBP NAD; 2.10A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.1
Probab=92.55 E-value=0.094 Score=46.68 Aligned_cols=33 Identities=12% Similarity=0.242 Sum_probs=30.2
Q ss_pred CcEEEECCchhHHHHHHhhhccCc--eEEEEcCCC
Q 018704 63 PRVVVLGSGWAGCRLMKGIDTSLY--DVVCVSPRN 95 (351)
Q Consensus 63 ~~VvIIG~G~aGl~aA~~L~~~g~--~v~vie~~~ 95 (351)
++|+|||+|..|.+.|..|.+.|+ +|+++|+++
T Consensus 1 mkI~VIGaG~~G~~la~~l~~~g~~~~V~l~D~~~ 35 (319)
T 1a5z_A 1 MKIGIVGLGRVGSSTAFALLMKGFAREMVLIDVDK 35 (319)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCeEEEEeCCh
Confidence 369999999999999999999998 999999864
No 490
>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}
Probab=92.51 E-value=0.14 Score=44.63 Aligned_cols=34 Identities=24% Similarity=0.404 Sum_probs=31.4
Q ss_pred CcEEEECC-chhHHHHHHhhhccCceEEEEcCCCc
Q 018704 63 PRVVVLGS-GWAGCRLMKGIDTSLYDVVCVSPRNH 96 (351)
Q Consensus 63 ~~VvIIG~-G~aGl~aA~~L~~~g~~v~vie~~~~ 96 (351)
++|.|||+ |..|.+.|..|.+.|++|+++++++.
T Consensus 12 m~I~iIG~tG~mG~~la~~l~~~g~~V~~~~r~~~ 46 (286)
T 3c24_A 12 KTVAILGAGGKMGARITRKIHDSAHHLAAIEIAPE 46 (286)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHSSSEEEEECCSHH
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCHH
Confidence 58999999 99999999999999999999998653
No 491
>2zqz_A L-LDH, L-lactate dehydrogenase; oxidoreductase, rossmann fold, cytoplasm, glycolysis, NAD, phosphoprotein; 2.50A {Lactobacillus casei} PDB: 2zqy_A 3vkv_A* 1llc_A*
Probab=92.50 E-value=0.11 Score=46.39 Aligned_cols=35 Identities=14% Similarity=0.230 Sum_probs=30.2
Q ss_pred CCCcEEEECCchhHHHHHHhhhccCc--eEEEEcCCC
Q 018704 61 EKPRVVVLGSGWAGCRLMKGIDTSLY--DVVCVSPRN 95 (351)
Q Consensus 61 ~~~~VvIIG~G~aGl~aA~~L~~~g~--~v~vie~~~ 95 (351)
.+.+|+|||+|..|.+.|..|...+. +++++|.+.
T Consensus 8 ~~~KI~IiGaG~vG~~la~~l~~~~~~~el~L~Di~~ 44 (326)
T 2zqz_A 8 DHQKVILVGDGAVGSSYAYAMVLQGIAQEIGIVDIFK 44 (326)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSCH
T ss_pred CCCEEEEECCCHHHHHHHHHHHcCCCCCEEEEEeCCc
Confidence 44799999999999999999988665 799999854
No 492
>3q2o_A Phosphoribosylaminoimidazole carboxylase, ATPase; carboxylates, ATP binding, lyase; 1.96A {Bacillus anthracis} PDB: 3qff_A* 3r5h_A*
Probab=92.50 E-value=0.14 Score=46.77 Aligned_cols=36 Identities=14% Similarity=0.309 Sum_probs=32.3
Q ss_pred CCCcEEEECCchhHHHHHHhhhccCceEEEEcCCCc
Q 018704 61 EKPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRNH 96 (351)
Q Consensus 61 ~~~~VvIIG~G~aGl~aA~~L~~~g~~v~vie~~~~ 96 (351)
..++|+|||+|..|..+|..+++.|++|+++|+.+.
T Consensus 13 ~~k~IlIlG~G~~g~~la~aa~~~G~~vi~~d~~~~ 48 (389)
T 3q2o_A 13 PGKTIGIIGGGQLGRMMALAAKEMGYKIAVLDPTKN 48 (389)
T ss_dssp TTSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSTT
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCEEEEEeCCCC
Confidence 346899999999999999999999999999997653
No 493
>3ldh_A Lactate dehydrogenase; oxidoreductase, CHOH donor, NAD acceptor; HET: NAD; 3.00A {Squalus acanthias} SCOP: i.12.1.1
Probab=92.50 E-value=0.16 Score=45.31 Aligned_cols=36 Identities=14% Similarity=0.106 Sum_probs=31.6
Q ss_pred CCCcEEEECCchhHHHHHHhhhccCc--eEEEEcCCCc
Q 018704 61 EKPRVVVLGSGWAGCRLMKGIDTSLY--DVVCVSPRNH 96 (351)
Q Consensus 61 ~~~~VvIIG~G~aGl~aA~~L~~~g~--~v~vie~~~~ 96 (351)
...+|.|||+|..|.++|..|+..|+ +++++|....
T Consensus 20 ~~~kV~ViGaG~vG~~~a~~la~~g~~~ev~L~Di~~~ 57 (330)
T 3ldh_A 20 SYNKITVVGCDAVGMADAISVLMKDLADEVALVDVMED 57 (330)
T ss_dssp CCCEEEEESTTHHHHHHHHHHHHHCCCSEEEEECSCHH
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCCeEEEEECCHH
Confidence 34789999999999999999999887 8999998543
No 494
>2izz_A Pyrroline-5-carboxylate reductase 1; amino-acid biosynthesis, NADP, oxidoreductase, proline biosy; HET: NAD; 1.95A {Homo sapiens} PDB: 2ger_A 2gr9_A* 2gra_A*
Probab=92.43 E-value=0.11 Score=46.25 Aligned_cols=34 Identities=24% Similarity=0.307 Sum_probs=31.0
Q ss_pred CCcEEEECCchhHHHHHHhhhccC----ceEEEEcCCC
Q 018704 62 KPRVVVLGSGWAGCRLMKGIDTSL----YDVVCVSPRN 95 (351)
Q Consensus 62 ~~~VvIIG~G~aGl~aA~~L~~~g----~~v~vie~~~ 95 (351)
.++|.|||+|..|.+.|..|.+.| ++|++++++.
T Consensus 22 ~mkI~iIG~G~mG~ala~~L~~~G~~~~~~V~v~~r~~ 59 (322)
T 2izz_A 22 SMSVGFIGAGQLAFALAKGFTAAGVLAAHKIMASSPDM 59 (322)
T ss_dssp CCCEEEESCSHHHHHHHHHHHHTTSSCGGGEEEECSCT
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCCCcceEEEECCCc
Confidence 358999999999999999999999 7999999875
No 495
>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*
Probab=92.42 E-value=0.14 Score=41.63 Aligned_cols=33 Identities=15% Similarity=0.355 Sum_probs=30.6
Q ss_pred CcEEEECC-chhHHHHHHhhhccCceEEEEcCCC
Q 018704 63 PRVVVLGS-GWAGCRLMKGIDTSLYDVVCVSPRN 95 (351)
Q Consensus 63 ~~VvIIG~-G~aGl~aA~~L~~~g~~v~vie~~~ 95 (351)
++|+|+|| |..|...+..|.+.|++|+++++++
T Consensus 4 ~~ilVtGatG~iG~~l~~~l~~~g~~V~~~~r~~ 37 (206)
T 1hdo_A 4 KKIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDS 37 (206)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCG
T ss_pred CEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCh
Confidence 57999998 9999999999999999999999864
No 496
>4gde_A UDP-galactopyranose mutase; flavin adenine dinucleotide binding, nucleotide binding, MUT isomerase; HET: FDA; 2.20A {Aspergillus fumigatus} PDB: 3ute_A* 3utg_A* 3uth_A* 4gdc_A* 4gdd_A* 3utf_A* 3ukh_A* 3ukf_A* 3uka_A* 3ukl_A* 3ukk_A* 3ukq_A* 3ukp_A*
Probab=92.41 E-value=0.11 Score=49.25 Aligned_cols=32 Identities=28% Similarity=0.538 Sum_probs=28.5
Q ss_pred eEEEECCChHHHHHHHHHHHH-HHHHHHhhhcCCCCccEEEEEeCCC
Q 018704 232 HCVVVGGGPTGVEFSGELSDF-IMRDVRQRYSHVKDYIHVTLIEANE 277 (351)
Q Consensus 232 ~v~VvGgG~~a~e~a~~l~~~-~~~~~~~~~~~~~~~~~v~~~~~~~ 277 (351)
.|+|||||.+|+-+|..|++. | .+|+++++++
T Consensus 12 DVvIIGaGisGLsaA~~L~k~~G--------------~~V~VlE~~~ 44 (513)
T 4gde_A 12 DVLVIGAGPTGLGAAKRLNQIDG--------------PSWMIVDSNE 44 (513)
T ss_dssp EEEEECCSHHHHHHHHHHHHHCC--------------SCEEEEESSS
T ss_pred CEEEECCcHHHHHHHHHHHhhCC--------------CCEEEEECCC
Confidence 799999999999999999864 4 8899999864
No 497
>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}
Probab=92.41 E-value=0.12 Score=42.59 Aligned_cols=32 Identities=19% Similarity=0.440 Sum_probs=29.7
Q ss_pred cEEEECC-chhHHHHHHhhhccCceEEEEcCCC
Q 018704 64 RVVVLGS-GWAGCRLMKGIDTSLYDVVCVSPRN 95 (351)
Q Consensus 64 ~VvIIG~-G~aGl~aA~~L~~~g~~v~vie~~~ 95 (351)
+|+|+|| |..|...+..|.+.|++|+++.+++
T Consensus 2 kvlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~ 34 (221)
T 3ew7_A 2 KIGIIGATGRAGSRILEEAKNRGHEVTAIVRNA 34 (221)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCS
T ss_pred eEEEEcCCchhHHHHHHHHHhCCCEEEEEEcCc
Confidence 6999995 9999999999999999999999865
No 498
>3cky_A 2-hydroxymethyl glutarate dehydrogenase; rossmann fold, two domain enzyme, oxidoreductase; 2.30A {Eubacterium barkeri}
Probab=92.38 E-value=0.098 Score=45.90 Aligned_cols=35 Identities=11% Similarity=0.060 Sum_probs=31.4
Q ss_pred CCcEEEECCchhHHHHHHhhhccCceEEEEcCCCc
Q 018704 62 KPRVVVLGSGWAGCRLMKGIDTSLYDVVCVSPRNH 96 (351)
Q Consensus 62 ~~~VvIIG~G~aGl~aA~~L~~~g~~v~vie~~~~ 96 (351)
.++|.|||+|..|...|..|.+.|++|+++|+++.
T Consensus 4 ~~~i~iiG~G~~G~~~a~~l~~~g~~V~~~~~~~~ 38 (301)
T 3cky_A 4 SIKIGFIGLGAMGKPMAINLLKEGVTVYAFDLMEA 38 (301)
T ss_dssp CCEEEEECCCTTHHHHHHHHHHTTCEEEEECSSHH
T ss_pred CCEEEEECccHHHHHHHHHHHHCCCeEEEEeCCHH
Confidence 36899999999999999999999999999998643
No 499
>3cgv_A Geranylgeranyl reductase related protein; NP_393992.1, geranylgeranyl bacteriochlorophyll reductase- like FIXC homolog; HET: MSE FAD UNL; 1.60A {Thermoplasma acidophilum dsm 1728} PDB: 3oz2_A*
Probab=92.38 E-value=0.094 Score=47.70 Aligned_cols=91 Identities=19% Similarity=0.271 Sum_probs=67.5
Q ss_pred eEEEECCChHHHHHHHHHHHHHHHHHHhhhcCCCCccEEEEEeCCCCCC---------------------C---------
Q 018704 232 HCVVVGGGPTGVEFSGELSDFIMRDVRQRYSHVKDYIHVTLIEANEILS---------------------S--------- 281 (351)
Q Consensus 232 ~v~VvGgG~~a~e~a~~l~~~~~~~~~~~~~~~~~~~~v~~~~~~~~l~---------------------~--------- 281 (351)
+|+|||||.+|+-+|..|++.| .+|+++++..... .
T Consensus 6 dVvIvG~G~aGl~~A~~La~~G--------------~~V~l~E~~~~~g~~~~~~~~~~~~~~~~lg~~~~~~~~~~~~~ 71 (397)
T 3cgv_A 6 DVLVVGGGPGGSTAARYAAKYG--------------LKTLMIEKRPEIGSPVRCGEGLSKGILNEADIKADRSFIANEVK 71 (397)
T ss_dssp EEEEECCSHHHHHHHHHHHHTT--------------CCEEEECSSSSTTCSCCSCCEEETHHHHHTTCCCCTTTEEEEES
T ss_pred CEEEECcCHHHHHHHHHHHHCC--------------CCEEEEeCCCCCCCCcccccccCHHHHHHcCCCCChHHhhhhcc
Confidence 7999999999999999999876 8899998863110 0
Q ss_pred ----------C----c--------------HHHHHHHHHHhhhcCcEEEcCe-EEEEeC--Ce---EEe---cCCcEEec
Q 018704 282 ----------F----D--------------DRLRHYATTQLSKSGVRLVRGI-VKDVDS--QK---LIL---NDGTEVPY 324 (351)
Q Consensus 282 ----------~----~--------------~~~~~~~~~~l~~~gV~~~~~~-v~~v~~--~~---v~~---~~g~~~~~ 324 (351)
. + ..+.+.+.+.+++.|++++.+. |+++.. +. |.+ .++.++++
T Consensus 72 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~gv~i~~~~~v~~i~~~~~~v~gv~~~~~~~~~~~~a 151 (397)
T 3cgv_A 72 GARIYGPSEKRPIILQSEKAGNEVGYVLERDKFDKHLAALAAKAGADVWVKSPALGVIKENGKVAGAKIRHNNEIVDVRA 151 (397)
T ss_dssp EEEEECTTCSSCEEEC-----CCCEEEECHHHHHHHHHHHHHHHTCEEESSCCEEEEEEETTEEEEEEEEETTEEEEEEE
T ss_pred eEEEEcCCCCEEEEEeccccCCceeEEEeHHHHHHHHHHHHHhCCCEEEECCEEEEEEEeCCEEEEEEEEECCeEEEEEc
Confidence 0 0 0233556667777899999994 888753 32 555 34567999
Q ss_pred cEEEEecCCCCc
Q 018704 325 GLLVWSTGVGPS 336 (351)
Q Consensus 325 D~vi~a~G~~p~ 336 (351)
|.||.|+|....
T Consensus 152 ~~vV~A~G~~s~ 163 (397)
T 3cgv_A 152 KMVIAADGFESE 163 (397)
T ss_dssp EEEEECCCTTCH
T ss_pred CEEEECCCcchH
Confidence 999999998763
No 500
>3c7a_A Octopine dehydrogenase; L) stereospecific opine dehydrogenas, oxidorecutase, oxidoreductase; HET: NAD; 2.10A {Pecten maximus} PDB: 3c7c_B* 3c7d_B* 3iqd_B*
Probab=92.37 E-value=0.094 Score=48.24 Aligned_cols=30 Identities=20% Similarity=0.175 Sum_probs=28.2
Q ss_pred CcEEEECCchhHHHHHHhhhc-cCceEEEEc
Q 018704 63 PRVVVLGSGWAGCRLMKGIDT-SLYDVVCVS 92 (351)
Q Consensus 63 ~~VvIIG~G~aGl~aA~~L~~-~g~~v~vie 92 (351)
++|.|||+|..|.+.|..|++ .|++|++++
T Consensus 3 mkI~ViGaG~~G~~~a~~La~~~G~~V~~~~ 33 (404)
T 3c7a_A 3 VKVCVCGGGNGAHTLSGLAASRDGVEVRVLT 33 (404)
T ss_dssp EEEEEECCSHHHHHHHHHHTTSTTEEEEEEC
T ss_pred ceEEEECCCHHHHHHHHHHHhCCCCEEEEEe
Confidence 579999999999999999988 599999999
Done!