Query 018705
Match_columns 351
No_of_seqs 209 out of 2148
Neff 9.2
Searched_HMMs 29240
Date Mon Mar 25 04:47:58 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/018705.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/018705hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2fp8_A Strictosidine synthase; 100.0 3.6E-31 1.2E-35 243.9 29.7 269 49-347 16-317 (322)
2 3sre_A PON1, serum paraoxonase 100.0 2.3E-28 8E-33 226.6 27.5 270 40-341 39-355 (355)
3 3dr2_A Exported gluconolactona 100.0 7.3E-26 2.5E-30 206.8 30.5 250 41-342 35-305 (305)
4 3e5z_A Putative gluconolactona 99.9 9.7E-24 3.3E-28 191.3 29.7 249 42-344 19-287 (296)
5 3g4e_A Regucalcin; six bladed 99.9 2.8E-22 9.4E-27 182.3 26.8 239 44-332 5-262 (297)
6 1pjx_A Dfpase, DIISOPROPYLFLUO 99.9 2.4E-21 8.3E-26 176.1 26.3 253 44-344 11-300 (314)
7 1q7f_A NHL, brain tumor CG1071 99.9 8.8E-19 3E-23 157.5 31.1 239 49-346 27-283 (286)
8 2p4o_A Hypothetical protein; p 99.9 4.4E-19 1.5E-23 161.9 29.1 225 43-332 25-278 (306)
9 4hw6_A Hypothetical protein, I 99.9 3.8E-19 1.3E-23 170.3 29.5 237 50-342 137-432 (433)
10 2ghs_A AGR_C_1268P; regucalcin 99.9 3.5E-19 1.2E-23 164.1 28.2 235 42-333 39-293 (326)
11 1rwi_B Serine/threonine-protei 99.9 2.9E-19 9.9E-24 158.9 24.8 234 53-346 25-267 (270)
12 2dg1_A DRP35, lactonase; beta 99.8 5E-19 1.7E-23 162.4 26.8 242 51-344 44-317 (333)
13 2z2n_A Virginiamycin B lyase; 99.8 6.8E-18 2.3E-22 151.6 31.9 229 51-342 14-254 (299)
14 2z2n_A Virginiamycin B lyase; 99.8 5.5E-18 1.9E-22 152.2 29.9 229 51-343 56-295 (299)
15 3tc9_A Hypothetical hydrolase; 99.8 2.2E-18 7.4E-23 164.9 28.0 237 50-342 135-429 (430)
16 2qc5_A Streptogramin B lactona 99.8 1.5E-17 5.1E-22 149.5 31.9 229 51-342 19-259 (300)
17 2qc5_A Streptogramin B lactona 99.8 6E-18 2E-22 152.1 29.0 227 51-342 61-299 (300)
18 3hrp_A Uncharacterized protein 99.8 3.3E-16 1.1E-20 148.8 32.3 233 50-341 129-408 (409)
19 2qe8_A Uncharacterized protein 99.8 3.5E-17 1.2E-21 151.7 24.6 235 42-334 8-312 (343)
20 3fvz_A Peptidyl-glycine alpha- 99.8 7.6E-17 2.6E-21 148.4 25.9 245 50-344 22-323 (329)
21 1npe_A Nidogen, entactin; glyc 99.8 3.3E-16 1.1E-20 139.6 25.5 203 51-307 35-247 (267)
22 3v64_C Agrin; beta propeller, 99.8 2.4E-16 8.1E-21 146.7 24.9 183 51-251 72-264 (349)
23 3v65_B Low-density lipoprotein 99.8 4.7E-16 1.6E-20 146.7 26.2 188 44-250 109-306 (386)
24 3dsm_A Uncharacterized protein 99.7 8.4E-16 2.9E-20 141.5 25.4 211 51-307 83-310 (328)
25 3v64_C Agrin; beta propeller, 99.7 5.5E-15 1.9E-19 137.4 29.3 227 55-341 37-273 (349)
26 3kya_A Putative phosphatase; s 99.7 2.1E-15 7.2E-20 145.1 26.9 241 48-344 135-476 (496)
27 3v65_B Low-density lipoprotein 99.7 6.6E-15 2.3E-19 138.8 28.0 228 54-341 79-316 (386)
28 1ijq_A LDL receptor, low-densi 99.7 3.7E-15 1.3E-19 136.6 25.5 183 51-251 29-227 (316)
29 1npe_A Nidogen, entactin; glyc 99.7 2.1E-14 7.2E-19 127.9 28.4 219 65-343 3-238 (267)
30 4a2l_A BT_4663, two-component 99.7 3.3E-15 1.1E-19 153.5 26.3 222 55-343 360-614 (795)
31 1rwi_B Serine/threonine-protei 99.7 2E-15 6.7E-20 133.9 21.5 182 50-251 65-253 (270)
32 3vgz_A Uncharacterized protein 99.7 4.1E-14 1.4E-18 129.9 30.5 234 52-344 41-304 (353)
33 3sov_A LRP-6, low-density lipo 99.7 4.9E-15 1.7E-19 136.0 23.4 182 51-250 34-226 (318)
34 4a0p_A LRP6, LRP-6, low-densit 99.7 4.7E-15 1.6E-19 148.0 24.9 187 46-251 31-226 (628)
35 3v9f_A Two-component system se 99.7 3.6E-15 1.2E-19 152.9 24.7 225 54-343 365-611 (781)
36 1q7f_A NHL, brain tumor CG1071 99.7 3.9E-15 1.3E-19 133.5 21.8 181 50-250 75-269 (286)
37 3v9f_A Two-component system se 99.7 6.7E-15 2.3E-19 150.9 26.4 225 55-344 410-657 (781)
38 4a2l_A BT_4663, two-component 99.7 1.1E-14 3.7E-19 149.6 27.7 223 55-344 409-660 (795)
39 3a9g_A Putative uncharacterize 99.7 1.3E-14 4.5E-19 135.1 25.7 253 42-343 20-352 (354)
40 1ijq_A LDL receptor, low-densi 99.7 5.8E-14 2E-18 128.6 29.2 221 65-342 3-237 (316)
41 2fp8_A Strictosidine synthase; 99.7 1.8E-14 6.2E-19 132.0 22.7 178 52-251 80-302 (322)
42 3p5b_L Low density lipoprotein 99.6 1.3E-13 4.3E-18 130.6 27.8 222 63-341 83-318 (400)
43 3dsm_A Uncharacterized protein 99.6 7E-14 2.4E-18 128.6 25.4 229 52-343 44-302 (328)
44 3p5b_L Low density lipoprotein 99.6 3.3E-14 1.1E-18 134.6 23.7 182 51-250 111-308 (400)
45 3e5z_A Putative gluconolactona 99.6 5.9E-14 2E-18 126.6 24.4 176 51-250 68-276 (296)
46 2ism_A Putative oxidoreductase 99.6 5.4E-14 1.9E-18 130.8 23.1 160 42-211 22-223 (352)
47 3m0c_C LDL receptor, low-densi 99.6 2.3E-13 7.8E-18 138.7 29.2 228 56-341 389-630 (791)
48 3sov_A LRP-6, low-density lipo 99.6 1.8E-13 6.1E-18 125.6 25.7 219 65-342 6-237 (318)
49 3hxj_A Pyrrolo-quinoline quino 99.6 3.4E-13 1.2E-17 122.9 27.1 218 56-344 102-325 (330)
50 3hrp_A Uncharacterized protein 99.6 4.4E-14 1.5E-18 134.1 21.5 180 51-251 171-399 (409)
51 3s94_A LRP-6, low-density lipo 99.6 5.6E-14 1.9E-18 140.1 23.0 184 50-251 38-232 (619)
52 3s94_A LRP-6, low-density lipo 99.6 1E-13 3.4E-18 138.2 24.7 184 50-251 347-540 (619)
53 3fvz_A Peptidyl-glycine alpha- 99.6 2.2E-14 7.5E-19 131.9 17.8 186 46-251 85-311 (329)
54 1pjx_A Dfpase, DIISOPROPYLFLUO 99.6 1.1E-13 3.6E-18 125.3 21.7 179 52-251 71-288 (314)
55 2p9w_A MAL S 1 allergenic prot 99.6 3E-13 1E-17 122.7 22.6 181 51-251 12-254 (334)
56 3g4e_A Regucalcin; six bladed 99.6 1E-13 3.6E-18 125.5 19.0 178 52-251 54-262 (297)
57 4a0p_A LRP6, LRP-6, low-densit 99.6 3.7E-13 1.3E-17 134.3 23.9 186 49-251 337-538 (628)
58 3u4y_A Uncharacterized protein 99.6 7.8E-12 2.7E-16 113.8 29.9 236 51-344 40-305 (331)
59 3hfq_A Uncharacterized protein 99.6 2.7E-12 9.3E-17 118.0 26.6 233 51-342 39-316 (347)
60 1n7d_A LDL receptor, low-densi 99.6 3.8E-14 1.3E-18 143.3 15.3 182 51-250 405-602 (699)
61 3m0c_C LDL receptor, low-densi 99.6 1.6E-12 5.6E-17 132.5 27.2 183 51-251 423-621 (791)
62 3ott_A Two-component system se 99.5 1.3E-12 4.5E-17 133.4 25.0 220 55-344 376-627 (758)
63 3das_A Putative oxidoreductase 99.5 6.3E-12 2.2E-16 115.9 26.9 165 39-211 20-222 (347)
64 3vgz_A Uncharacterized protein 99.5 5.5E-11 1.9E-15 108.8 32.8 219 52-332 89-334 (353)
65 1l0q_A Surface layer protein; 99.5 6.3E-11 2.1E-15 110.3 33.0 233 52-343 32-275 (391)
66 2dg1_A DRP35, lactonase; beta 99.5 4.2E-12 1.4E-16 116.1 23.2 180 52-251 87-300 (333)
67 3ott_A Two-component system se 99.5 1.1E-12 3.8E-17 133.9 21.2 224 55-344 327-587 (758)
68 3hxj_A Pyrrolo-quinoline quino 99.5 3.2E-12 1.1E-16 116.4 20.9 214 56-341 64-282 (330)
69 1n7d_A LDL receptor, low-densi 99.5 6.6E-13 2.3E-17 134.3 17.4 222 64-342 378-613 (699)
70 3dr2_A Exported gluconolactona 99.5 7.3E-12 2.5E-16 113.6 21.9 179 52-250 86-296 (305)
71 2g8s_A Glucose/sorbosone dehyd 99.5 4.4E-12 1.5E-16 118.0 20.7 162 42-211 9-218 (353)
72 3tc9_A Hypothetical hydrolase; 99.5 4.7E-12 1.6E-16 120.9 20.3 180 50-251 177-419 (430)
73 4hw6_A Hypothetical protein, I 99.4 1.6E-11 5.5E-16 117.3 22.5 198 93-342 139-373 (433)
74 3kya_A Putative phosphatase; s 99.4 4.1E-11 1.4E-15 115.2 24.1 180 51-251 185-464 (496)
75 2qe8_A Uncharacterized protein 99.4 1.8E-11 6.1E-16 113.1 20.1 182 49-251 64-310 (343)
76 3u4y_A Uncharacterized protein 99.4 2E-10 6.8E-15 104.4 25.8 230 58-344 4-253 (331)
77 2ghs_A AGR_C_1268P; regucalcin 99.4 2.7E-11 9.1E-16 111.2 19.8 175 53-252 91-293 (326)
78 3hfq_A Uncharacterized protein 99.4 1.6E-10 5.4E-15 106.1 25.1 180 51-250 85-305 (347)
79 3no2_A Uncharacterized protein 99.4 5.7E-10 2E-14 100.0 27.6 212 63-331 5-231 (276)
80 1jof_A Carboxy-CIS,CIS-muconat 99.4 4.1E-10 1.4E-14 104.6 27.5 242 51-343 39-341 (365)
81 2p4o_A Hypothetical protein; p 99.4 7.3E-11 2.5E-15 107.2 20.2 189 93-343 32-242 (306)
82 3a9g_A Putative uncharacterize 99.3 1.5E-10 5E-15 107.7 21.4 184 51-250 72-330 (354)
83 2iwa_A Glutamine cyclotransfer 99.3 2.3E-10 8E-15 101.5 20.1 194 94-344 22-238 (266)
84 1l0q_A Surface layer protein; 99.3 6.4E-09 2.2E-13 96.6 30.4 219 65-344 3-234 (391)
85 2ism_A Putative oxidoreductase 99.3 3.9E-10 1.3E-14 104.7 21.9 153 84-252 22-223 (352)
86 1pby_B Quinohemoprotein amine 99.3 2.2E-09 7.6E-14 97.1 26.5 225 53-344 35-311 (337)
87 3bws_A Protein LP49; two-domai 99.3 1.8E-09 6.3E-14 101.8 26.3 232 52-344 123-391 (433)
88 3bws_A Protein LP49; two-domai 99.3 6.7E-09 2.3E-13 97.9 29.9 249 54-343 172-432 (433)
89 1ri6_A Putative isomerase YBHE 99.3 4.8E-09 1.6E-13 95.1 27.6 179 53-249 85-295 (343)
90 3no2_A Uncharacterized protein 99.3 3.3E-09 1.1E-13 95.0 25.7 218 52-321 37-273 (276)
91 1ri6_A Putative isomerase YBHE 99.3 4E-09 1.4E-13 95.7 26.6 180 52-249 38-249 (343)
92 2iwa_A Glutamine cyclotransfer 99.3 1.1E-09 3.6E-14 97.2 21.4 186 40-250 9-225 (266)
93 1nir_A Nitrite reductase; hemo 99.2 5.8E-09 2E-13 102.4 28.3 235 53-345 180-460 (543)
94 3ow8_A WD repeat-containing pr 99.2 6E-08 2.1E-12 88.3 32.8 233 49-342 78-320 (321)
95 4ery_A WD repeat-containing pr 99.2 7.2E-08 2.5E-12 86.8 32.4 240 49-344 21-269 (312)
96 3scy_A Hypothetical bacterial 99.2 8.1E-09 2.8E-13 95.2 26.6 231 51-342 49-336 (361)
97 1pby_B Quinohemoprotein amine 99.2 7.6E-09 2.6E-13 93.6 25.7 213 53-309 83-321 (337)
98 1gxr_A ESG1, transducin-like e 99.2 5.5E-08 1.9E-12 87.7 30.9 228 53-341 99-335 (337)
99 1nir_A Nitrite reductase; hemo 99.2 1.7E-08 5.8E-13 99.1 28.6 229 58-343 144-402 (543)
100 3nol_A Glutamine cyclotransfer 99.2 1.7E-09 5.9E-14 95.0 19.0 135 52-208 87-243 (262)
101 1jmx_B Amine dehydrogenase; ox 99.2 2.4E-08 8.1E-13 90.8 27.6 214 53-308 44-335 (349)
102 2ymu_A WD-40 repeat protein; u 99.2 4.2E-08 1.4E-12 96.0 30.9 228 53-342 305-538 (577)
103 1cru_A Protein (soluble quinop 99.2 2E-10 6.9E-15 110.2 14.0 166 42-211 18-248 (454)
104 3c75_H MADH, methylamine dehyd 99.2 5.3E-09 1.8E-13 99.2 22.8 222 44-305 113-409 (426)
105 2ymu_A WD-40 repeat protein; u 99.2 3.8E-08 1.3E-12 96.3 29.7 223 53-337 346-574 (577)
106 3nol_A Glutamine cyclotransfer 99.2 6.7E-09 2.3E-13 91.3 21.3 192 96-346 46-259 (262)
107 3nok_A Glutaminyl cyclase; bet 99.1 3.4E-09 1.1E-13 93.2 18.6 135 52-208 96-253 (268)
108 3qqz_A Putative uncharacterize 99.1 2.4E-08 8.3E-13 88.0 24.2 183 49-250 24-242 (255)
109 3scy_A Hypothetical bacterial 99.1 7.8E-08 2.7E-12 88.5 28.8 179 52-250 100-325 (361)
110 3mbr_X Glutamine cyclotransfer 99.1 5.7E-09 1.9E-13 90.9 19.3 136 51-208 64-222 (243)
111 3das_A Putative oxidoreductase 99.1 5.1E-08 1.7E-12 89.8 25.2 218 85-344 24-293 (347)
112 3c75_H MADH, methylamine dehyd 99.1 5.7E-08 1.9E-12 92.1 25.6 129 62-208 83-246 (426)
113 2g8s_A Glucose/sorbosone dehyd 99.1 1E-08 3.5E-13 95.2 19.8 196 51-250 65-341 (353)
114 2hqs_A Protein TOLB; TOLB, PAL 99.1 6.8E-08 2.3E-12 91.4 25.8 178 53-248 180-370 (415)
115 1erj_A Transcriptional repress 99.0 4.3E-07 1.5E-11 84.9 29.6 232 55-346 127-392 (393)
116 1jof_A Carboxy-CIS,CIS-muconat 99.0 1.7E-07 5.8E-12 86.8 26.4 180 65-250 4-212 (365)
117 1vyh_C Platelet-activating fac 99.0 4.1E-07 1.4E-11 85.6 28.9 233 52-345 109-371 (410)
118 1jmx_B Amine dehydrogenase; ox 99.0 2.1E-07 7.1E-12 84.5 25.7 144 56-208 4-165 (349)
119 2mad_H Methylamine dehydrogena 99.0 9.9E-07 3.4E-11 82.3 30.8 242 45-346 62-353 (373)
120 2ynn_A Coatomer subunit beta'; 99.0 1.2E-06 4.2E-11 78.7 30.3 233 52-343 14-259 (304)
121 1k8k_C P40, ARP2/3 complex 41 99.0 1.8E-07 6.2E-12 85.7 25.2 232 53-343 10-274 (372)
122 3ow8_A WD repeat-containing pr 99.0 1.6E-06 5.5E-11 78.8 31.3 179 52-250 33-225 (321)
123 3nok_A Glutaminyl cyclase; bet 99.0 1.4E-07 4.8E-12 82.9 22.8 187 98-342 59-265 (268)
124 1qks_A Cytochrome CD1 nitrite 99.0 5E-07 1.7E-11 88.9 29.3 225 63-343 166-421 (567)
125 1qks_A Cytochrome CD1 nitrite 99.0 6E-07 2.1E-11 88.4 28.8 242 45-344 192-478 (567)
126 1sq9_A Antiviral protein SKI8; 99.0 6.5E-07 2.2E-11 82.9 27.8 237 52-343 63-395 (397)
127 3q6k_A 43.2 kDa salivary prote 99.0 7.3E-07 2.5E-11 82.7 27.2 221 52-331 26-342 (381)
128 3qqz_A Putative uncharacterize 98.9 4.8E-07 1.7E-11 79.6 24.2 196 92-343 26-253 (255)
129 2hqs_A Protein TOLB; TOLB, PAL 98.9 5.3E-07 1.8E-11 85.2 26.3 160 73-249 159-328 (415)
130 1r5m_A SIR4-interacting protei 98.9 9.8E-07 3.4E-11 82.0 27.9 230 53-344 110-362 (425)
131 3sjl_D Methylamine dehydrogena 98.9 5.1E-07 1.7E-11 84.2 25.5 224 44-308 73-373 (386)
132 3vl1_A 26S proteasome regulato 98.9 6.7E-07 2.3E-11 83.6 26.7 228 58-344 104-366 (420)
133 3zwl_B Eukaryotic translation 98.9 2.5E-06 8.5E-11 77.6 29.8 187 49-250 30-237 (369)
134 1got_B GT-beta; complex (GTP-b 98.9 5.7E-06 2E-10 75.5 32.2 182 48-251 52-246 (340)
135 2z3z_A Dipeptidyl aminopeptida 98.9 7.2E-07 2.5E-11 89.7 28.3 193 52-248 82-328 (706)
136 1mda_H Methylamine dehydrogena 98.9 1.1E-07 3.7E-12 88.6 20.0 224 43-307 59-355 (368)
137 1got_B GT-beta; complex (GTP-b 98.9 2.6E-06 8.9E-11 77.8 29.3 223 54-338 100-338 (340)
138 4ery_A WD repeat-containing pr 98.9 6.4E-06 2.2E-10 73.8 31.4 142 52-211 66-214 (312)
139 1gxr_A ESG1, transducin-like e 98.9 3.3E-06 1.1E-10 75.8 29.3 179 52-250 52-243 (337)
140 4gqb_B Methylosome protein 50; 98.9 6.7E-07 2.3E-11 82.4 24.8 227 55-344 86-332 (344)
141 3mkq_A Coatomer beta'-subunit; 98.9 1.6E-06 5.5E-11 88.3 30.0 233 51-343 13-259 (814)
142 1vyh_C Platelet-activating fac 98.9 1.5E-06 5E-11 81.8 27.7 227 53-341 152-409 (410)
143 1r5m_A SIR4-interacting protei 98.9 7E-07 2.4E-11 83.0 25.2 179 52-250 46-266 (425)
144 1pgu_A Actin interacting prote 98.9 3.5E-06 1.2E-10 82.5 31.4 232 54-343 67-328 (615)
145 3zwl_B Eukaryotic translation 98.9 2.4E-06 8.2E-11 77.7 28.1 244 53-343 76-346 (369)
146 2ojh_A Uncharacterized protein 98.9 1.1E-06 3.7E-11 77.2 24.8 163 71-249 20-191 (297)
147 3frx_A Guanine nucleotide-bind 98.9 4.3E-06 1.5E-10 75.7 29.3 182 49-251 15-216 (319)
148 1cru_A Protein (soluble quinop 98.9 6.9E-08 2.4E-12 92.5 18.0 184 124-333 19-248 (454)
149 3mbr_X Glutamine cyclotransfer 98.9 5.6E-07 1.9E-11 78.3 22.1 155 132-344 21-180 (243)
150 3vl1_A 26S proteasome regulato 98.9 7.5E-07 2.6E-11 83.2 24.8 231 54-344 59-323 (420)
151 2ojh_A Uncharacterized protein 98.9 4.4E-07 1.5E-11 79.8 21.8 178 52-248 42-233 (297)
152 3sjl_D Methylamine dehydrogena 98.9 2.1E-06 7.2E-11 80.1 27.1 131 60-208 41-206 (386)
153 3q7m_A Lipoprotein YFGL, BAMB; 98.9 1E-06 3.5E-11 81.7 25.0 127 168-340 247-375 (376)
154 3ei3_B DNA damage-binding prot 98.9 6.6E-07 2.2E-11 82.8 23.4 241 53-343 120-382 (383)
155 3q7m_A Lipoprotein YFGL, BAMB; 98.9 1.2E-06 4.1E-11 81.1 25.0 215 62-344 102-338 (376)
156 3sre_A PON1, serum paraoxonase 98.8 4.8E-08 1.6E-12 90.3 14.6 139 52-209 112-285 (355)
157 2ynn_A Coatomer subunit beta'; 98.8 4.7E-06 1.6E-10 74.9 27.7 230 54-344 58-303 (304)
158 2pm9_A Protein WEB1, protein t 98.8 2.3E-06 7.8E-11 79.6 26.1 235 53-346 69-340 (416)
159 2p9w_A MAL S 1 allergenic prot 98.8 2E-07 6.9E-12 84.5 17.8 177 53-250 64-303 (334)
160 2ecf_A Dipeptidyl peptidase IV 98.8 1E-06 3.6E-11 88.9 25.3 138 52-209 37-228 (741)
161 2wg3_C Hedgehog-interacting pr 98.8 1.4E-07 4.7E-12 90.5 17.6 163 43-209 6-242 (463)
162 3odt_A Protein DOA1; ubiquitin 98.8 7.7E-06 2.6E-10 72.7 28.0 228 51-345 18-257 (313)
163 3frx_A Guanine nucleotide-bind 98.8 7.9E-06 2.7E-10 73.9 28.4 176 53-250 67-256 (319)
164 1erj_A Transcriptional repress 98.8 1.3E-05 4.5E-10 74.7 29.8 178 53-251 66-276 (393)
165 2ecf_A Dipeptidyl peptidase IV 98.8 1E-06 3.5E-11 89.0 23.7 192 54-249 111-354 (741)
166 3mkq_A Coatomer beta'-subunit; 98.8 2.4E-06 8.2E-11 87.0 26.5 179 53-250 57-247 (814)
167 2pbi_B Guanine nucleotide-bind 98.8 2.6E-05 8.8E-10 71.7 31.0 182 49-251 62-260 (354)
168 4aez_A CDC20, WD repeat-contai 98.8 1.7E-05 6E-10 73.9 30.2 225 56-343 98-336 (401)
169 1pgu_A Actin interacting prote 98.8 6.8E-06 2.3E-10 80.4 27.7 238 52-344 19-284 (615)
170 4g56_B MGC81050 protein; prote 98.7 1.4E-06 4.7E-11 80.5 21.5 231 54-346 97-346 (357)
171 3odt_A Protein DOA1; ubiquitin 98.7 7E-06 2.4E-10 72.9 25.2 229 52-345 60-298 (313)
172 4a9v_A PHOX; hydrolase, beta-p 98.7 7.6E-08 2.6E-12 93.0 12.6 72 131-208 475-549 (592)
173 3dm0_A Maltose-binding peripla 98.7 1.7E-05 5.8E-10 79.7 30.1 178 52-250 431-621 (694)
174 1sq9_A Antiviral protein SKI8; 98.7 6.5E-06 2.2E-10 76.0 24.9 245 45-345 10-324 (397)
175 2aq5_A Coronin-1A; WD40 repeat 98.7 2.7E-06 9.3E-11 79.4 22.3 178 53-248 83-284 (402)
176 2oiz_A Aromatic amine dehydrog 98.7 5.7E-06 2E-10 76.6 24.3 243 44-344 45-335 (361)
177 4h5i_A Guanine nucleotide-exch 98.7 3.3E-06 1.1E-10 78.2 22.7 182 54-251 136-332 (365)
178 1nr0_A Actin interacting prote 98.7 3.4E-05 1.2E-09 76.4 31.1 179 53-251 61-259 (611)
179 4aez_A CDC20, WD repeat-contai 98.7 2.9E-05 9.9E-10 72.4 28.9 234 53-345 136-382 (401)
180 3ei3_B DNA damage-binding prot 98.7 3.9E-06 1.3E-10 77.5 22.7 181 52-251 74-271 (383)
181 2aq5_A Coronin-1A; WD40 repeat 98.7 5.5E-06 1.9E-10 77.3 23.8 240 53-346 36-302 (402)
182 3dm0_A Maltose-binding peripla 98.7 9E-06 3.1E-10 81.7 26.6 180 52-251 383-581 (694)
183 2oiz_A Aromatic amine dehydrog 98.7 3.7E-06 1.3E-10 77.8 21.8 98 137-244 259-360 (361)
184 3f3f_A Nucleoporin SEH1; struc 98.7 1.4E-05 4.6E-10 71.7 25.1 185 46-250 6-237 (351)
185 1yfq_A Cell cycle arrest prote 98.7 5.2E-06 1.8E-10 75.0 22.3 178 52-250 12-213 (342)
186 3iz6_a 40S ribosomal protein R 98.7 0.00012 4.3E-09 67.6 31.9 258 48-344 63-376 (380)
187 2vdu_B TRNA (guanine-N(7)-)-me 98.7 2.2E-05 7.5E-10 74.5 27.2 143 53-214 104-267 (450)
188 3o4h_A Acylamino-acid-releasin 98.6 2.4E-06 8.1E-11 84.0 20.9 179 53-251 66-265 (582)
189 2xzm_R RACK1; ribosome, transl 98.6 2E-05 6.9E-10 71.9 25.7 177 52-248 77-272 (343)
190 3v7d_B Cell division control p 98.6 7.1E-05 2.4E-09 70.8 30.4 170 56-250 127-329 (464)
191 4h5i_A Guanine nucleotide-exch 98.6 0.00014 5E-09 67.0 31.3 188 98-345 138-345 (365)
192 1nr0_A Actin interacting prote 98.6 1.7E-05 5.8E-10 78.6 26.3 182 51-251 18-210 (611)
193 2vdu_B TRNA (guanine-N(7)-)-me 98.6 2.9E-05 9.9E-10 73.6 26.8 135 95-250 105-259 (450)
194 2pbi_B Guanine nucleotide-bind 98.6 1.3E-05 4.5E-10 73.7 23.5 176 54-250 157-345 (354)
195 3k26_A Polycomb protein EED; W 98.6 2E-05 7E-10 71.4 24.5 153 44-214 11-188 (366)
196 2xzm_R RACK1; ribosome, transl 98.6 7E-05 2.4E-09 68.2 28.0 177 53-250 23-232 (343)
197 3sfz_A APAF-1, apoptotic pepti 98.6 3.9E-05 1.3E-09 82.0 30.1 230 53-342 659-912 (1249)
198 1yfq_A Cell cycle arrest prote 98.6 1E-05 3.4E-10 73.1 21.9 218 52-331 57-312 (342)
199 3dw8_B Serine/threonine-protei 98.6 2.6E-05 8.9E-10 73.2 25.5 179 53-250 30-304 (447)
200 3azo_A Aminopeptidase; POP fam 98.6 1.9E-05 6.5E-10 78.6 25.7 184 56-250 81-312 (662)
201 3pe7_A Oligogalacturonate lyas 98.6 2.1E-05 7.2E-10 72.5 24.4 187 57-244 41-250 (388)
202 3sfz_A APAF-1, apoptotic pepti 98.6 4.9E-05 1.7E-09 81.3 30.3 233 51-343 615-871 (1249)
203 1k8k_C P40, ARP2/3 complex 41 98.6 5.7E-06 2E-10 75.5 20.1 177 52-249 53-262 (372)
204 4aow_A Guanine nucleotide-bind 98.6 0.00023 7.8E-09 63.8 30.6 177 52-250 87-275 (340)
205 3dwl_C Actin-related protein 2 98.6 8.9E-07 3E-11 81.6 14.6 144 53-214 13-173 (377)
206 4aow_A Guanine nucleotide-bind 98.6 7.6E-05 2.6E-09 67.0 27.2 185 48-250 35-234 (340)
207 4a11_B DNA excision repair pro 98.6 0.00011 3.8E-09 67.5 28.9 233 52-346 100-368 (408)
208 3fm0_A Protein CIAO1; WDR39,SG 98.6 8.3E-06 2.8E-10 74.7 20.6 177 55-251 20-214 (345)
209 1xfd_A DIP, dipeptidyl aminope 98.6 3.5E-06 1.2E-10 84.8 19.3 135 53-208 18-191 (723)
210 4g56_B MGC81050 protein; prote 98.5 8.9E-06 3E-10 75.0 20.4 142 54-214 45-209 (357)
211 3pe7_A Oligogalacturonate lyas 98.5 1.4E-05 4.8E-10 73.7 21.9 176 56-244 85-302 (388)
212 4ggc_A P55CDC, cell division c 98.5 0.00013 4.3E-09 64.9 27.4 233 55-346 71-318 (318)
213 1mda_H Methylamine dehydrogena 98.5 2.1E-05 7.1E-10 73.1 22.5 86 63-150 31-143 (368)
214 2ece_A 462AA long hypothetical 98.5 1E-05 3.5E-10 76.4 20.2 183 51-249 137-399 (462)
215 2ece_A 462AA long hypothetical 98.5 6.4E-05 2.2E-09 71.0 25.5 187 61-250 93-340 (462)
216 3gre_A Serine/threonine-protei 98.5 7.1E-05 2.4E-09 70.2 26.4 241 48-345 60-361 (437)
217 3o4h_A Acylamino-acid-releasin 98.5 1.1E-05 3.8E-10 79.2 21.1 173 54-248 24-211 (582)
218 3i2n_A WD repeat-containing pr 98.5 1.3E-05 4.4E-10 72.6 20.1 179 53-249 67-278 (357)
219 3s25_A Hypothetical 7-bladed b 98.5 4.2E-05 1.4E-09 69.0 22.9 224 42-346 48-296 (302)
220 1fwx_A Nitrous oxide reductase 98.5 3.4E-06 1.2E-10 82.2 16.5 189 62-252 100-351 (595)
221 4e54_B DNA damage-binding prot 98.5 1E-05 3.5E-10 76.4 19.7 179 54-251 122-316 (435)
222 3k26_A Polycomb protein EED; W 98.5 6.9E-05 2.4E-09 67.9 24.6 110 53-180 71-193 (366)
223 2xyi_A Probable histone-bindin 98.5 2.9E-05 9.9E-10 73.3 22.6 180 52-250 129-341 (430)
224 3jrp_A Fusion protein of prote 98.5 0.00016 5.5E-09 65.7 26.8 180 52-250 12-228 (379)
225 4gqb_B Methylosome protein 50; 98.5 3E-05 1E-09 71.2 21.5 176 54-250 130-319 (344)
226 2mad_H Methylamine dehydrogena 98.5 9.7E-05 3.3E-09 68.7 25.2 195 52-305 125-357 (373)
227 4gga_A P55CDC, cell division c 98.5 0.00017 5.9E-09 67.5 27.2 232 54-346 150-398 (420)
228 3fm0_A Protein CIAO1; WDR39,SG 98.4 0.00052 1.8E-08 62.5 29.6 146 52-215 62-222 (345)
229 2z3z_A Dipeptidyl aminopeptida 98.4 3.9E-05 1.3E-09 76.9 23.7 130 54-208 28-199 (706)
230 3dwl_C Actin-related protein 2 98.4 1.1E-05 3.8E-10 74.1 17.7 181 53-252 57-272 (377)
231 4e54_B DNA damage-binding prot 98.4 3.9E-05 1.3E-09 72.4 21.8 244 53-344 166-431 (435)
232 2pm9_A Protein WEB1, protein t 98.4 4.6E-06 1.6E-10 77.5 15.1 178 53-250 14-234 (416)
233 3b7f_A Glycosyl hydrolase, BNR 98.4 6.6E-05 2.3E-09 70.1 21.8 170 59-250 19-252 (394)
234 2hes_X YDR267CP; beta-propelle 98.4 0.00023 8E-09 64.4 24.7 144 53-214 60-226 (330)
235 3iz6_a 40S ribosomal protein R 98.4 0.00012 4.2E-09 67.7 23.2 177 54-250 160-363 (380)
236 3i2n_A WD repeat-containing pr 98.3 8.6E-05 3E-09 67.1 21.5 181 51-250 18-231 (357)
237 3dw8_B Serine/threonine-protei 98.3 0.00025 8.4E-09 66.4 25.1 143 53-214 95-311 (447)
238 2hes_X YDR267CP; beta-propelle 98.3 0.00033 1.1E-08 63.5 25.1 141 54-214 17-180 (330)
239 4a5s_A Dipeptidyl peptidase 4 98.3 9.6E-05 3.3E-09 74.9 23.6 249 55-344 65-401 (740)
240 3mmy_A MRNA export factor; mRN 98.3 9.8E-05 3.4E-09 66.8 21.3 98 51-149 39-147 (368)
241 1fwx_A Nitrous oxide reductase 98.3 7.5E-06 2.6E-10 79.9 13.2 183 43-245 188-457 (595)
242 1xfd_A DIP, dipeptidyl aminope 98.3 0.00012 4.1E-09 73.4 22.6 193 54-248 63-323 (723)
243 4a11_B DNA excision repair pro 98.3 0.0002 6.9E-09 65.8 22.0 145 48-211 40-209 (408)
244 3azo_A Aminopeptidase; POP fam 98.2 8.2E-05 2.8E-09 74.0 20.3 155 53-224 131-329 (662)
245 3v7d_B Cell division control p 98.2 0.004 1.4E-07 58.6 30.6 231 52-346 163-424 (464)
246 4gga_A P55CDC, cell division c 98.2 0.004 1.4E-07 58.1 31.1 232 53-346 107-356 (420)
247 1k32_A Tricorn protease; prote 98.2 0.00012 4E-09 77.2 21.5 147 54-210 340-492 (1045)
248 1k32_A Tricorn protease; prote 98.2 0.00015 5E-09 76.5 22.1 173 55-249 248-438 (1045)
249 3jrp_A Fusion protein of prote 98.2 0.00063 2.1E-08 61.7 23.7 180 53-250 57-275 (379)
250 1z68_A Fibroblast activation p 98.2 5.9E-05 2E-09 75.9 17.8 190 54-247 62-328 (719)
251 2pm7_B Protein transport prote 98.2 0.0029 9.8E-08 56.1 27.2 179 53-249 11-225 (297)
252 3q6k_A 43.2 kDa salivary prote 98.2 0.00026 8.7E-09 65.7 20.5 182 50-251 85-343 (381)
253 2ovr_B FBW7, F-BOX/WD repeat p 98.2 0.0036 1.2E-07 58.7 29.2 134 167-345 256-393 (445)
254 2ovr_B FBW7, F-BOX/WD repeat p 98.2 0.003 1E-07 59.3 28.3 217 59-345 125-350 (445)
255 1tl2_A L10, protein (tachylect 98.1 2.1E-05 7.3E-10 66.9 11.1 107 40-149 29-152 (236)
256 3lrv_A PRE-mRNA-splicing facto 98.1 0.0006 2E-08 61.9 21.6 142 54-214 128-288 (343)
257 2oaj_A Protein SNI1; WD40 repe 98.1 0.00024 8.3E-09 73.7 21.1 179 52-251 18-231 (902)
258 3s25_A Hypothetical 7-bladed b 98.1 0.00072 2.5E-08 60.9 21.6 213 62-346 24-258 (302)
259 3jro_A Fusion protein of prote 98.1 0.00038 1.3E-08 70.7 22.0 183 49-250 7-226 (753)
260 3c5m_A Oligogalacturonate lyas 98.1 0.00022 7.4E-09 65.6 18.5 178 56-249 85-300 (396)
261 1p22_A F-BOX/WD-repeat protein 98.1 0.0026 8.8E-08 59.7 25.9 216 58-343 138-365 (435)
262 3c5m_A Oligogalacturonate lyas 98.1 0.00033 1.1E-08 64.3 19.2 191 54-249 38-256 (396)
263 2xdw_A Prolyl endopeptidase; a 98.1 0.0028 9.6E-08 63.7 27.4 181 55-250 128-354 (710)
264 3lrv_A PRE-mRNA-splicing facto 98.0 0.0069 2.4E-07 54.7 27.9 137 94-250 127-279 (343)
265 2gop_A Trilobed protease; beta 98.0 0.0018 6E-08 58.5 23.1 176 53-250 60-280 (347)
266 3gre_A Serine/threonine-protei 98.0 0.0012 4.2E-08 61.7 22.7 141 53-211 113-283 (437)
267 1kb0_A Quinohemoprotein alcoho 98.0 0.011 3.7E-07 59.3 30.8 55 287-343 496-567 (677)
268 1z68_A Fibroblast activation p 98.0 7.3E-05 2.5E-09 75.2 14.3 132 54-209 18-188 (719)
269 3f3f_A Nucleoporin SEH1; struc 98.0 0.00095 3.3E-08 59.4 19.8 145 52-214 58-245 (351)
270 2ad6_A Methanol dehydrogenase 98.0 0.012 4.1E-07 57.7 29.1 46 286-333 482-527 (571)
271 2j04_A TAU60, YPL007P, hypothe 98.0 0.004 1.4E-07 60.7 25.0 100 95-215 88-208 (588)
272 1w6s_A Methanol dehydrogenase 97.9 0.02 6.9E-07 56.4 30.1 44 286-331 491-534 (599)
273 2xyi_A Probable histone-bindin 97.9 0.00057 2E-08 64.3 18.2 145 52-214 232-406 (430)
274 3bg1_A Protein SEC13 homolog; 97.9 0.0019 6.3E-08 58.0 20.8 137 46-200 8-161 (316)
275 3mmy_A MRNA export factor; mRN 97.9 0.00083 2.8E-08 60.6 17.8 68 52-120 87-156 (368)
276 3amr_A 3-phytase; beta-propell 97.9 0.0014 4.9E-08 59.8 18.8 176 111-342 47-262 (355)
277 2pm7_B Protein transport prote 97.9 0.0075 2.6E-07 53.4 23.6 179 54-250 56-273 (297)
278 3b7f_A Glycosyl hydrolase, BNR 97.8 0.00076 2.6E-08 62.8 17.3 178 53-250 56-298 (394)
279 2xbg_A YCF48-like protein; pho 97.8 0.015 5E-07 52.7 25.5 175 53-250 37-223 (327)
280 3bg1_A Protein SEC13 homolog; 97.8 0.0036 1.2E-07 56.1 21.0 192 54-250 60-281 (316)
281 3zwu_A Alkaline phosphatase PH 97.8 8.4E-05 2.9E-09 72.9 10.5 71 132-207 476-548 (592)
282 2j04_A TAU60, YPL007P, hypothe 97.8 0.0016 5.3E-08 63.5 19.2 141 54-216 132-295 (588)
283 1p22_A F-BOX/WD-repeat protein 97.8 0.0068 2.3E-07 56.7 23.0 135 55-214 177-321 (435)
284 3vu4_A KMHSV2; beta-propeller 97.8 0.022 7.5E-07 51.9 26.2 196 52-251 20-260 (355)
285 2ad6_A Methanol dehydrogenase 97.7 0.038 1.3E-06 54.1 28.4 54 287-344 442-495 (571)
286 1kb0_A Quinohemoprotein alcoho 97.7 0.032 1.1E-06 55.8 28.4 54 288-345 456-509 (677)
287 2hz6_A Endoplasmic reticulum t 97.7 0.0002 6.8E-09 66.4 11.3 134 55-213 3-142 (369)
288 3jro_A Fusion protein of prote 97.7 0.0014 4.7E-08 66.5 18.5 179 53-249 55-272 (753)
289 2xbg_A YCF48-like protein; pho 97.6 0.03 1E-06 50.6 24.2 173 55-250 83-268 (327)
290 2j04_B YDR362CP, TAU91; beta p 97.6 0.00054 1.8E-08 66.7 13.1 140 53-211 268-419 (524)
291 1tl2_A L10, protein (tachylect 97.6 0.0024 8.2E-08 54.3 14.8 132 94-249 42-199 (236)
292 2oaj_A Protein SNI1; WD40 repe 97.5 0.0025 8.6E-08 66.1 17.6 140 54-214 61-238 (902)
293 2j04_B YDR362CP, TAU91; beta p 97.5 0.0039 1.3E-07 60.5 17.3 176 54-251 210-417 (524)
294 1yr2_A Prolyl oligopeptidase; 97.5 0.026 8.9E-07 56.9 23.6 140 55-209 166-335 (741)
295 2bkl_A Prolyl endopeptidase; m 97.4 0.097 3.3E-06 52.3 26.6 178 55-250 171-382 (695)
296 3vu4_A KMHSV2; beta-propeller 97.4 0.0054 1.9E-07 55.9 15.7 82 69-151 155-260 (355)
297 2oit_A Nucleoporin 214KDA; NH2 97.4 0.019 6.3E-07 54.2 19.8 139 54-211 39-214 (434)
298 1kv9_A Type II quinohemoprotei 97.3 0.15 5.1E-06 50.8 28.4 58 286-345 476-554 (668)
299 2gop_A Trilobed protease; beta 97.3 0.015 5.1E-07 52.2 17.6 169 54-250 106-318 (347)
300 4a5s_A Dipeptidyl peptidase 4 97.3 0.0035 1.2E-07 63.3 14.3 132 55-208 20-189 (740)
301 2wg3_C Hedgehog-interacting pr 97.3 0.0064 2.2E-07 58.0 15.2 117 85-208 6-156 (463)
302 2bkl_A Prolyl endopeptidase; m 97.2 0.024 8.1E-07 56.7 19.7 139 54-209 123-289 (695)
303 4ggc_A P55CDC, cell division c 97.2 0.098 3.4E-06 45.7 29.9 138 55-214 29-177 (318)
304 3iuj_A Prolyl endopeptidase; h 97.2 0.1 3.5E-06 52.1 24.0 138 55-209 132-299 (693)
305 2xdw_A Prolyl endopeptidase; a 97.2 0.18 6.3E-06 50.3 25.7 179 54-250 173-399 (710)
306 3amr_A 3-phytase; beta-propell 97.1 0.13 4.3E-06 46.9 21.7 130 65-215 41-205 (355)
307 4gq1_A NUP37; propeller, trans 97.1 0.088 3E-06 48.5 21.4 99 65-181 103-220 (393)
308 1flg_A Protein (quinoprotein e 97.1 0.26 9E-06 48.2 28.4 44 286-331 504-547 (582)
309 2oit_A Nucleoporin 214KDA; NH2 97.0 0.0031 1E-07 59.6 10.6 134 53-204 94-255 (434)
310 1kv9_A Type II quinohemoprotei 97.0 0.042 1.4E-06 54.9 19.4 84 169-252 437-521 (668)
311 1yiq_A Quinohemoprotein alcoho 96.9 0.39 1.3E-05 48.0 30.9 58 286-345 493-571 (689)
312 1yiq_A Quinohemoprotein alcoho 96.8 0.12 3.9E-06 51.9 20.0 83 170-252 455-538 (689)
313 2w18_A PALB2, fancn, partner a 96.8 0.12 4.2E-06 47.1 18.2 140 56-214 183-353 (356)
314 1flg_A Protein (quinoprotein e 96.5 0.27 9.1E-06 48.2 20.2 83 169-252 465-549 (582)
315 4gq1_A NUP37; propeller, trans 96.4 0.53 1.8E-05 43.1 21.4 66 54-120 139-214 (393)
316 1w6s_A Methanol dehydrogenase 96.4 0.81 2.8E-05 44.9 26.6 112 56-183 57-195 (599)
317 3iuj_A Prolyl endopeptidase; h 96.4 0.94 3.2E-05 45.1 26.0 178 55-251 178-391 (693)
318 3zwu_A Alkaline phosphatase PH 96.1 0.059 2E-06 52.8 12.6 120 132-252 384-552 (592)
319 1yr2_A Prolyl oligopeptidase; 95.7 0.32 1.1E-05 48.9 16.9 135 55-207 271-424 (741)
320 2w18_A PALB2, fancn, partner a 95.0 2.1 7.1E-05 38.9 23.4 106 72-183 156-273 (356)
321 4a9v_A PHOX; hydrolase, beta-p 94.7 0.061 2.1E-06 52.1 7.1 59 50-110 474-548 (592)
322 1sqj_A OXG-RCBH, oligoxylogluc 93.9 6.3 0.00021 39.9 24.2 96 53-149 16-140 (789)
323 2cn3_A Xyloglucanase, beta-1,4 92.9 8.5 0.00029 38.5 26.8 96 53-149 24-151 (737)
324 3a0f_A Xyloglucanase; beta-pro 91.5 13 0.00043 37.5 24.5 96 53-149 22-152 (763)
325 2xe4_A Oligopeptidase B; hydro 90.8 6.5 0.00022 39.5 16.0 62 133-209 175-240 (751)
326 2be1_A Serine/threonine-protei 90.0 0.9 3.1E-05 41.2 7.9 105 63-186 10-137 (339)
327 1xip_A Nucleoporin NUP159; bet 89.9 7.6 0.00026 35.7 14.4 126 53-205 89-229 (388)
328 2hz6_A Endoplasmic reticulum t 85.8 0.21 7.1E-06 45.7 1.0 98 62-183 91-196 (369)
329 1xip_A Nucleoporin NUP159; bet 85.4 14 0.00047 33.9 13.1 129 53-211 39-182 (388)
330 2xe4_A Oligopeptidase B; hydro 82.9 40 0.0014 33.6 21.5 106 98-216 178-300 (751)
331 2cn3_A Xyloglucanase, beta-1,4 82.9 25 0.00087 35.1 14.9 146 55-210 135-322 (737)
332 4asc_A Kelch repeat and BTB do 82.3 24 0.00082 30.6 24.2 104 73-186 13-133 (315)
333 2be1_A Serine/threonine-protei 81.1 2.2 7.6E-05 38.5 5.7 25 62-86 110-134 (339)
334 1zgk_A Kelch-like ECH-associat 80.6 27 0.00094 30.1 24.5 101 73-186 39-153 (308)
335 1k3i_A Galactose oxidase precu 79.1 12 0.00041 36.7 10.9 107 82-207 175-303 (656)
336 1sqj_A OXG-RCBH, oligoxylogluc 78.4 29 0.00098 35.0 13.6 120 55-185 124-275 (789)
337 3ii7_A Kelch-like protein 7; p 76.0 37 0.0013 29.1 26.0 103 72-186 23-134 (306)
338 3a0f_A Xyloglucanase; beta-pro 75.4 67 0.0023 32.1 15.3 144 56-215 592-757 (763)
339 2woz_A Kelch repeat and BTB do 71.8 49 0.0017 28.6 25.0 102 74-186 25-143 (318)
340 1k3i_A Galactose oxidase precu 67.8 93 0.0032 30.2 14.3 120 54-185 188-329 (656)
341 2vpj_A Kelch-like protein 12; 66.7 59 0.002 27.6 26.7 218 73-343 31-278 (301)
342 3sbq_A Nitrous-oxide reductase 64.6 36 0.0012 33.0 9.7 76 74-150 299-396 (638)
343 2xn4_A Kelch-like protein 2; s 63.4 69 0.0024 27.2 24.9 101 73-186 30-140 (302)
344 4asc_A Kelch repeat and BTB do 62.6 74 0.0025 27.3 14.6 101 73-186 117-228 (315)
345 2uvk_A YJHT; unknown function, 48.0 1.4E+02 0.0047 26.0 15.6 87 63-150 19-126 (357)
346 2woz_A Kelch repeat and BTB do 47.1 1.4E+02 0.0046 25.6 14.8 111 63-186 109-238 (318)
347 2zwa_A Leucine carboxyl methyl 46.2 2.2E+02 0.0077 27.9 16.4 130 62-207 396-556 (695)
348 3sbq_A Nitrous-oxide reductase 45.5 46 0.0016 32.3 6.9 81 171-251 299-397 (638)
349 2vpj_A Kelch-like protein 12; 44.4 1.4E+02 0.0049 25.1 21.7 50 290-343 176-231 (301)
350 3f6k_A Sortilin; protein sorti 35.3 2.5E+02 0.0086 27.7 10.8 73 55-129 93-177 (685)
351 1zgk_A Kelch-like ECH-associat 33.5 2.2E+02 0.0075 24.1 24.1 101 73-186 90-200 (308)
352 2xn4_A Kelch-like protein 2; s 32.0 2.3E+02 0.0078 23.8 17.6 111 63-186 108-236 (302)
353 2xzh_A Clathrin heavy chain 1; 28.6 3.2E+02 0.011 24.5 9.3 45 51-95 259-303 (365)
354 3hx6_A Type 4 fimbrial biogene 26.1 3.6E+02 0.012 25.9 9.8 58 288-346 222-287 (570)
355 3f6k_A Sortilin; protein sorti 25.6 4.9E+02 0.017 25.6 21.2 75 72-148 64-156 (685)
356 3ii7_A Kelch-like protein 7; p 23.7 3.2E+02 0.011 22.8 25.6 115 63-186 55-185 (306)
357 1bpo_A Protein (clathrin); cla 21.7 5E+02 0.017 24.3 9.7 45 51-95 258-302 (494)
358 4eqa_C PA1845 protein, putativ 20.5 2.4E+02 0.0083 20.2 5.6 8 104-111 111-118 (153)
359 2zwa_A Leucine carboxyl methyl 20.3 6E+02 0.021 24.7 13.5 109 63-181 451-579 (695)
No 1
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=100.00 E-value=3.6e-31 Score=243.88 Aligned_cols=269 Identities=25% Similarity=0.398 Sum_probs=205.4
Q ss_pred CCcCCCceEEEeeCCCeEEEEEcCCEEEEEEcCCCeEEEEeec--------------------CCccccceEEcC-CCCE
Q 018705 49 GCVNHPEDVSVVVSKGALYTATRDGWVKYFILHNETLVNWKHI--------------------DSQSLLGLTTTK-DGGV 107 (351)
Q Consensus 49 ~~~~~pe~i~~d~~~g~lyv~~~~g~I~~~d~~~g~~~~~~~~--------------------~~~p~~gl~~d~-~G~L 107 (351)
+++..||++++|+++..+|++..+++|+++++.+++++.+... ..+|. ||++|+ +|+|
T Consensus 16 g~~~~p~~i~~d~~g~~l~v~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~p~-gi~~~~~~g~l 94 (322)
T 2fp8_A 16 APSYAPNSFTFDSTNKGFYTSVQDGRVIKYEGPNSGFVDFAYASPYWNKAFCENSTDAEKRPLCGRTY-DISYNLQNNQL 94 (322)
T ss_dssp CSSSCCCCEECCTTCSSEEEECTTSEEEEECCTTTCEEEEEESCTTCCHHHHTTCCCGGGHHHHCCEE-EEEEETTTTEE
T ss_pred CccCCceEEEEcCCCCEEEEEcCCCeEEEECCCCCceEEEecccccccccccccccchhccccCCCCc-eEEEcCCCCcE
Confidence 5578999999996544599999999999999877777766421 24689 999997 8999
Q ss_pred EEEeCCCCeEEEcCC-C-eEEecCC-----CCCcccEEEcc-CCcEEEEeCCCccCCcccccccccccCCceEEEEeCCC
Q 018705 108 ILCDNEKGLLKVTEE-G-VEAIVPD-----ASFTNDVIAAS-DGTLYFTVASTKYTPTDFYKDMAEGKPYGQLRKYDPKL 179 (351)
Q Consensus 108 ~v~d~~~gl~~~~~~-g-~~~l~~~-----~~~~n~l~~d~-dG~ly~t~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~ 179 (351)
||++...++++++++ + .+.+... ...|+++++|+ +|++||+++...+....+...+.++...++|++||+++
T Consensus 95 ~v~d~~~~i~~~d~~~g~~~~~~~~~~~~~~~~p~~i~~d~~~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~ 174 (322)
T 2fp8_A 95 YIVDCYYHLSVVGSEGGHATQLATSVDGVPFKWLYAVTVDQRTGIVYFTDVSTLYDDRGVQQIMDTSDKTGRLIKYDPST 174 (322)
T ss_dssp EEEETTTEEEEECTTCEECEEEESEETTEECSCEEEEEECTTTCCEEEEESCSSCCTTCHHHHHHHTCCCEEEEEEETTT
T ss_pred EEEECCCCEEEEeCCCCEEEEecccCCCCcccccceEEEecCCCEEEEECCcccccccccceehcccCCCceEEEEeCCC
Confidence 999988889999974 5 6665432 26799999999 99999999764444433333344455668899999988
Q ss_pred CeEEEeecCccccceEEEcCCCCEEEEEecce----eEEeecCCCCceeEEeccCCCCCCceEECCCCCEEEEEecCCch
Q 018705 180 KETTVLHEGFYFANGIALSKNEDFVVVCESWK----RYWLKGDRAGILDAFIENLPGGPDNINLAPDGSFWIGLIKMNQT 255 (351)
Q Consensus 180 ~~~~~~~~~~~~~ngi~~~~dg~~lyv~~~~~----~~~i~~~~~~~~~~~~~~~~g~pd~i~~d~~G~lwva~~~~~~~ 255 (351)
++++.+...+..||||++++||+.|||+++.+ +|++.+...++.+.+.+ +++ |+|+++|++|+|||+....+..
T Consensus 175 ~~~~~~~~~~~~p~gia~~~dg~~lyv~d~~~~~I~~~~~~~~~~~~~~~~~~-~~g-P~gi~~d~~G~l~va~~~~~~~ 252 (322)
T 2fp8_A 175 KETTLLLKELHVPGGAEVSADSSFVLVAEFLSHQIVKYWLEGPKKGTAEVLVK-IPN-PGNIKRNADGHFWVSSSEELDG 252 (322)
T ss_dssp TEEEEEEEEESCCCEEEECTTSSEEEEEEGGGTEEEEEESSSTTTTCEEEEEE-CSS-EEEEEECTTSCEEEEEEEETTS
T ss_pred CEEEEeccCCccCcceEECCCCCEEEEEeCCCCeEEEEECCCCcCCccceEEe-CCC-CCCeEECCCCCEEEEecCcccc
Confidence 88887777788999999999999999999865 45655444455666664 667 9999999999999998653221
Q ss_pred hhhhhhcChhHHHHHHhccchhhcccCCCCCCceEEEEEECCCCeEEEEEECCCCCcccceeEEEEECCEEEEEecCCCe
Q 018705 256 GVRAIQKCREKWELLDAYPGLISLLLPMGSDAGARVVKVDGNDGKIIRDFNDPDATYISFVTSAAEFDGNLYLASLQSNF 335 (351)
Q Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~g~~~~~~~~~~g~~~~~~~~~~~~~g~L~ig~~~~~~ 335 (351)
. | . ....+.|.+||+ +|+.+..+..++|.....+++++..+++||+++..+++
T Consensus 253 ~-------~----------~---------~~~~~~v~~~d~-~G~~~~~~~~~~g~~~~~~~~~~~~~g~L~v~~~~~~~ 305 (322)
T 2fp8_A 253 N-------M----------H---------GRVDPKGIKFDE-FGNILEVIPLPPPFAGEHFEQIQEHDGLLYIGTLFHGS 305 (322)
T ss_dssp S-------T----------T---------SCEEEEEEEECT-TSCEEEEEECCTTTTTSCCCEEEEETTEEEEECSSCSE
T ss_pred c-------c----------c---------CCCccEEEEECC-CCCEEEEEECCCCCccccceEEEEeCCEEEEeecCCCc
Confidence 1 0 0 022467999999 99999999988876566788888889999999999999
Q ss_pred EEEEeCCCCCCC
Q 018705 336 IGILPLDGPEPQ 347 (351)
Q Consensus 336 i~~~~~~~~~~~ 347 (351)
|.++++....+.
T Consensus 306 i~~~~~~~~~~~ 317 (322)
T 2fp8_A 306 VGILVYDKKGNS 317 (322)
T ss_dssp EEEEEC------
T ss_pred eEEEecccccCc
Confidence 999998866553
No 2
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=99.97 E-value=2.3e-28 Score=226.59 Aligned_cols=270 Identities=20% Similarity=0.298 Sum_probs=192.1
Q ss_pred ccCceEecCCCcCCCceEEEeeCCCeEEEEE-------------cCCEEEEEEcCC--CeEEEEeec-------CCcccc
Q 018705 40 MKGLTKLGEGCVNHPEDVSVVVSKGALYTAT-------------RDGWVKYFILHN--ETLVNWKHI-------DSQSLL 97 (351)
Q Consensus 40 l~~~~~i~~~~~~~pe~i~~d~~~g~lyv~~-------------~~g~I~~~d~~~--g~~~~~~~~-------~~~p~~ 97 (351)
+..+++|... ..+||+|+++ .+|.+|+++ .+|+|+++|+++ ++.+.+... ..+|+
T Consensus 39 ~~~C~~i~~~-~~G~EDi~~~-~~G~~~~s~~~~~pg~~~~~~~~~G~I~~~d~~~~~~~~~~l~~~g~~~~~~~f~Ph- 115 (355)
T 3sre_A 39 LPNCNLVKGI-DNGSEDLEIL-PNGLAFISSGLKYPGIMSFDPDKSGKILLMDLNEKEPAVSELEIIGNTLDISSFNPH- 115 (355)
T ss_dssp CSCEEECTTC-CSCCCEEEEC-TTSEEEEEECCC-----------CCEEEEEETTSSSCCEEECEEECSSCCGGGCCEE-
T ss_pred CCCCEEeCCC-CCCcceeEEc-CCCeEEEEeccccCCCcccCCCCCCeEEEEecCCCCCceEEEEccCCCCCcCceeee-
Confidence 4577777442 4799999999 489999997 689999999863 455544332 24899
Q ss_pred ceEEcC--CC--CEEEEeCCCC-----eEEEcCCC-eEEec----CC-CCCcccEEEccCCcEEEEeCCCccCCccc-cc
Q 018705 98 GLTTTK--DG--GVILCDNEKG-----LLKVTEEG-VEAIV----PD-ASFTNDVIAASDGTLYFTVASTKYTPTDF-YK 161 (351)
Q Consensus 98 gl~~d~--~G--~L~v~d~~~g-----l~~~~~~g-~~~l~----~~-~~~~n~l~~d~dG~ly~t~~~~~~~~~~~-~~ 161 (351)
||.+.+ +| +|||+++..+ ++++++++ ...+. .. .+.|||++++++|++|++++.. |..... ..
T Consensus 116 Gi~~~~d~dg~~~L~Vvnh~~~~s~ielf~~d~~~~~~~~~~~~~g~~~~~pND~~v~~~G~fyvt~~~~-ftd~~~~~~ 194 (355)
T 3sre_A 116 GISTFIDDDNTVYLLVVNHPGSSSTVEVFKFQEEEKSLLHLKTIRHKLLPSVNDIVAVGPEHFYATNDHY-FIDPYLKSW 194 (355)
T ss_dssp EEEEEECTTCCEEEEEEECSTTCCEEEEEEEETTTTEEEEEEEECCTTCSSEEEEEEEETTEEEEEESCS-CSSHHHHHH
T ss_pred eeEEEECCCCcEEEEEEECCCCCCeEEEEEEECCCCEEEEEeccccCCCCCCceEEEeCCCCEEecCCcE-eCCcccccc
Confidence 999854 45 6999998753 78888754 32222 11 3899999999999999998742 111000 01
Q ss_pred ccccccCCceEEEEeCCCCeEEEeecCccccceEEEcCCCCEEEEEecce----eEEeec-CCCCceeEEeccCCCCCCc
Q 018705 162 DMAEGKPYGQLRKYDPKLKETTVLHEGFYFANGIALSKNEDFVVVCESWK----RYWLKG-DRAGILDAFIENLPGGPDN 236 (351)
Q Consensus 162 ~~~~~~~~g~l~~~d~~~~~~~~~~~~~~~~ngi~~~~dg~~lyv~~~~~----~~~i~~-~~~~~~~~~~~~~~g~pd~ 236 (351)
+.+.+.+.|+||+|++. +++.+.+++..||||++|||+++||++++.. +|++.. ...+..+.+ ..++.|||
T Consensus 195 e~~~~~~~g~vyr~d~~--~~~~~~~~l~~pNGia~spDg~~lYvadt~~~~I~~~~~~~~g~l~~~~~~--~~~g~PDG 270 (355)
T 3sre_A 195 EMHLGLAWSFVTYYSPN--DVRVVAEGFDFANGINISPDGKYVYIAELLAHKIHVYEKHANWTLTPLRVL--SFDTLVDN 270 (355)
T ss_dssp HHHTTCCCEEEEEECTT--CCEEEEEEESSEEEEEECTTSSEEEEEEGGGTEEEEEEECTTSCEEEEEEE--ECSSEEEE
T ss_pred hhhccCCccEEEEEECC--eEEEeecCCcccCcceECCCCCEEEEEeCCCCeEEEEEECCCCcEecCEEE--eCCCCCce
Confidence 12234567899999984 6777888899999999999999999999876 566653 223334455 35789999
Q ss_pred eEECC-CCCEEEEEecCCchhhhhhhcChhHHHHHHhccchhhcccCCCCCCceEEEEEEC---CCCeEEEEEECCCCCc
Q 018705 237 INLAP-DGSFWIGLIKMNQTGVRAIQKCREKWELLDAYPGLISLLLPMGSDAGARVVKVDG---NDGKIIRDFNDPDATY 312 (351)
Q Consensus 237 i~~d~-~G~lwva~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~---~~g~~~~~~~~~~g~~ 312 (351)
+++|+ +|+||+|........+.+ . |.. .....|.++.. +++++.+.|.+ +|..
T Consensus 271 i~vD~e~G~lwva~~~~g~~v~~~---~----------P~~---------~~~s~v~rI~~~~~~~~~v~~v~~d-dG~~ 327 (355)
T 3sre_A 271 ISVDPVTGDLWVGCHPNGMRIFFY---D----------AEN---------PPGSEVLRIQDILSEEPKVTVVYAE-NGTV 327 (355)
T ss_dssp EEECTTTCCEEEEEESCHHHHHSC---C----------TTS---------CCCEEEEEEECTTSSSCEEEEEEEE-CSSS
T ss_pred EEEeCCCCcEEEEecCCceEEEEE---C----------CCC---------CCCCEEEEEEccCCCCcEEEEEEEc-CCCE
Confidence 99999 599999876422121111 1 110 22356888873 28898889988 8888
Q ss_pred ccceeEEEEECCEEEEEecCCCeEEEEeC
Q 018705 313 ISFVTSAAEFDGNLYLASLQSNFIGILPL 341 (351)
Q Consensus 313 ~~~~~~~~~~~g~L~ig~~~~~~i~~~~~ 341 (351)
....|.+...+|+||||+...+ +..|++
T Consensus 328 l~~~T~a~~~~g~L~iGsv~~~-~l~c~~ 355 (355)
T 3sre_A 328 LQGSTVAAVYKGKLLIGTVFHK-ALYCDL 355 (355)
T ss_dssp CCSEEEEEEETTEEEEEESSSC-EEEEEC
T ss_pred EEeeEEEEEECCEEEEEEcCCC-ceeccC
Confidence 8899999999999999999777 777764
No 3
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=99.95 E-value=7.3e-26 Score=206.75 Aligned_cols=250 Identities=16% Similarity=0.217 Sum_probs=186.9
Q ss_pred cCceEecCCCcCCCceEEEeeCCC-eEEEEEcCCEEEEEEcCCCeEEEEeecCCccccceEEcCCCCEEEEeCC-CCeEE
Q 018705 41 KGLTKLGEGCVNHPEDVSVVVSKG-ALYTATRDGWVKYFILHNETLVNWKHIDSQSLLGLTTTKDGGVILCDNE-KGLLK 118 (351)
Q Consensus 41 ~~~~~i~~~~~~~pe~i~~d~~~g-~lyv~~~~g~I~~~d~~~g~~~~~~~~~~~p~~gl~~d~~G~L~v~d~~-~gl~~ 118 (351)
..+|++..+ +..+|+++++++++ .+|++..+++|+++++ +++.+.+......|. ++++|++|+||+++.. .++.+
T Consensus 35 ~~~~~l~~~-~~~~egp~~~~~g~~l~~~d~~~~~i~~~~~-~g~~~~~~~~~~~~~-gl~~d~dG~l~v~~~~~~~v~~ 111 (305)
T 3dr2_A 35 ARLLTLYDQ-ATWSEGPAWWEAQRTLVWSDLVGRRVLGWRE-DGTVDVLLDATAFTN-GNAVDAQQRLVHCEHGRRAITR 111 (305)
T ss_dssp CCCEEEECC-CSSEEEEEEEGGGTEEEEEETTTTEEEEEET-TSCEEEEEESCSCEE-EEEECTTSCEEEEETTTTEEEE
T ss_pred CceEEEecC-CcCccCCeEeCCCCEEEEEECCCCEEEEEeC-CCCEEEEeCCCCccc-eeeECCCCCEEEEECCCCEEEE
Confidence 456778777 67899999997776 5677888999999998 677777777778899 9999999999999876 57888
Q ss_pred EcCCC-eEEecCC-----CCCcccEEEccCCcEEEEeCCCccCCccccc--ccccccCCceEEEEeCCCCeEEEeecCcc
Q 018705 119 VTEEG-VEAIVPD-----ASFTNDVIAASDGTLYFTVASTKYTPTDFYK--DMAEGKPYGQLRKYDPKLKETTVLHEGFY 190 (351)
Q Consensus 119 ~~~~g-~~~l~~~-----~~~~n~l~~d~dG~ly~t~~~~~~~~~~~~~--~~~~~~~~g~l~~~d~~~~~~~~~~~~~~ 190 (351)
++++| .+.+... .+.||+++++++|++||||+. |+...... ........++|+++|+++++++.+. .+.
T Consensus 112 ~~~~g~~~~~~~~~~~~~~~~~~~i~~d~dG~l~~td~~--~g~~~~~~~~~~~~~~~~~~v~~~d~~~g~~~~~~-~~~ 188 (305)
T 3dr2_A 112 SDADGQAHLLVGRYAGKRLNSPNDLIVARDGAIWFTDPP--FGLRKPSQGCPADPELAHHSVYRLPPDGSPLQRMA-DLD 188 (305)
T ss_dssp ECTTSCEEEEECEETTEECSCCCCEEECTTSCEEEECCS--GGGSCGGGSCCCCCSSSCEEEEEECSSSCCCEEEE-EES
T ss_pred ECCCCCEEEEEeccCCCccCCCCCEEECCCCCEEEeCcC--CCccccccccccccccCCCeEEEEcCCCCcEEEEe-cCC
Confidence 88778 6665432 167999999999999999864 11100000 0001122468999999888887776 778
Q ss_pred ccceEEEcCCCCEEEEEecc------e---eEEeecCCCCceeEEeccCCCCCCceEECCCCCEEEEEecCCchhhhhhh
Q 018705 191 FANGIALSKNEDFVVVCESW------K---RYWLKGDRAGILDAFIENLPGGPDNINLAPDGSFWIGLIKMNQTGVRAIQ 261 (351)
Q Consensus 191 ~~ngi~~~~dg~~lyv~~~~------~---~~~i~~~~~~~~~~~~~~~~g~pd~i~~d~~G~lwva~~~~~~~~~~~~~ 261 (351)
.|||+++++|++.||++++. + +|.+.+......+.+.+...+.|+++++|++|+||+++.
T Consensus 189 ~p~gl~~spdg~~lyv~~~~~~~~~~~~i~~~~~~~~~l~~~~~~~~~~~~~pdgi~~d~~G~lwv~~~----------- 257 (305)
T 3dr2_A 189 HPNGLAFSPDEQTLYVSQTPEQGHGSVEITAFAWRDGALHDRRHFASVPDGLPDGFCVDRGGWLWSSSG----------- 257 (305)
T ss_dssp SEEEEEECTTSSEEEEEECCC---CCCEEEEEEEETTEEEEEEEEECCSSSCCCSEEECTTSCEEECCS-----------
T ss_pred CCcceEEcCCCCEEEEEecCCcCCCCCEEEEEEecCCCccCCeEEEECCCCCCCeEEECCCCCEEEecC-----------
Confidence 89999999999999999875 3 344443222233455544467899999999999999862
Q ss_pred cChhHHHHHHhccchhhcccCCCCCCceEEEEEECCCCeEEEEEECCCCCcccceeEEEE--ECCEEEEEecCCCeEEEE
Q 018705 262 KCREKWELLDAYPGLISLLLPMGSDAGARVVKVDGNDGKIIRDFNDPDATYISFVTSAAE--FDGNLYLASLQSNFIGIL 339 (351)
Q Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~g~~~~~~~~~~g~~~~~~~~~~~--~~g~L~ig~~~~~~i~~~ 339 (351)
.+|.+|++ +|+.+..+..+++ +++++. +++.||+++. .+++++
T Consensus 258 ---------------------------~gv~~~~~-~g~~~~~~~~~~~-----~~~~~f~~d~~~L~it~~--~~l~~~ 302 (305)
T 3dr2_A 258 ---------------------------TGVCVFDS-DGQLLGHIPTPGT-----ASNCTFDQAQQRLFITGG--PCLWML 302 (305)
T ss_dssp ---------------------------SEEEEECT-TSCEEEEEECSSC-----CCEEEECTTSCEEEEEET--TEEEEE
T ss_pred ---------------------------CcEEEECC-CCCEEEEEECCCc-----eeEEEEeCCCCEEEEEcC--CeEEEE
Confidence 26999999 9999999987652 445554 4568999994 789998
Q ss_pred eCC
Q 018705 340 PLD 342 (351)
Q Consensus 340 ~~~ 342 (351)
+++
T Consensus 303 ~~~ 305 (305)
T 3dr2_A 303 PLP 305 (305)
T ss_dssp ECC
T ss_pred ECC
Confidence 864
No 4
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=99.93 E-value=9.7e-24 Score=191.27 Aligned_cols=249 Identities=18% Similarity=0.233 Sum_probs=182.3
Q ss_pred CceEecCCCcCCCceEEEeeCCC-eEEEEEcCCEEEEEEcCCCeEEEEeecCCccccceEEcCCCCEEEEeCC-CCeEEE
Q 018705 42 GLTKLGEGCVNHPEDVSVVVSKG-ALYTATRDGWVKYFILHNETLVNWKHIDSQSLLGLTTTKDGGVILCDNE-KGLLKV 119 (351)
Q Consensus 42 ~~~~i~~~~~~~pe~i~~d~~~g-~lyv~~~~g~I~~~d~~~g~~~~~~~~~~~p~~gl~~d~~G~L~v~d~~-~gl~~~ 119 (351)
.++.+..+ ...||++++|++++ .+|++..+++|+++++.++ .+.+......|. +++++++|+||+++.. .+++++
T Consensus 19 ~~~~l~~~-~~~~eg~~~d~~g~~l~~~~~~~~~i~~~~~~~~-~~~~~~~~~~~~-~l~~~~dg~l~v~~~~~~~i~~~ 95 (296)
T 3e5z_A 19 EARRLADG-FTWTEGPVYVPARSAVIFSDVRQNRTWAWSDDGQ-LSPEMHPSHHQN-GHCLNKQGHLIACSHGLRRLERQ 95 (296)
T ss_dssp CCEEEECC-CSSEEEEEEEGGGTEEEEEEGGGTEEEEEETTSC-EEEEESSCSSEE-EEEECTTCCEEEEETTTTEEEEE
T ss_pred cEEEEecC-CccccCCeEeCCCCEEEEEeCCCCEEEEEECCCC-eEEEECCCCCcc-eeeECCCCcEEEEecCCCeEEEE
Confidence 44666665 67899999997776 5778888999999999777 777766667789 9999999999999976 578888
Q ss_pred cC-CC-eEEecCC-----CCCcccEEEccCCcEEEEeCCCccCCcccc--cccccccCCceEEEEeCCCCeEEEeecCcc
Q 018705 120 TE-EG-VEAIVPD-----ASFTNDVIAASDGTLYFTVASTKYTPTDFY--KDMAEGKPYGQLRKYDPKLKETTVLHEGFY 190 (351)
Q Consensus 120 ~~-~g-~~~l~~~-----~~~~n~l~~d~dG~ly~t~~~~~~~~~~~~--~~~~~~~~~g~l~~~d~~~~~~~~~~~~~~ 190 (351)
++ +| .+.+... ...|+++++|++|++|++++. ++..... .........++|++++++ ++.+.+...+.
T Consensus 96 d~~~g~~~~~~~~~~~~~~~~~~~i~~d~~G~l~vtd~~--~g~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~~~~~~~~ 172 (296)
T 3e5z_A 96 REPGGEWESIADSFEGKKLNSPNDVCLAPDGSLWFSDPT--YGIDKPEEGYGGEMELPGRWVFRLAPD-GTLSAPIRDRV 172 (296)
T ss_dssp CSTTCCEEEEECEETTEECCCCCCEEECTTSCEEEEECS--HHHHCGGGSSCCCCCSSSCEEEEECTT-SCEEEEECCCS
T ss_pred cCCCCcEEEEeeccCCCCCCCCCCEEECCCCCEEEECCc--cccccccccccccccCCCcEEEEECCC-CCEEEeecCCC
Confidence 86 77 6555322 157999999999999999863 1000000 000011124689999997 77777777888
Q ss_pred ccceEEEcCCCCEEEEEecce-e---EEee-cCCC-CceeEEeccCCCCCCceEECCCCCEEEEEecCCchhhhhhhcCh
Q 018705 191 FANGIALSKNEDFVVVCESWK-R---YWLK-GDRA-GILDAFIENLPGGPDNINLAPDGSFWIGLIKMNQTGVRAIQKCR 264 (351)
Q Consensus 191 ~~ngi~~~~dg~~lyv~~~~~-~---~~i~-~~~~-~~~~~~~~~~~g~pd~i~~d~~G~lwva~~~~~~~~~~~~~~~~ 264 (351)
.|+|+++++||+.+ ++++.. + +.+. +... ...+.+ ....+.|+++++|++|+||+++ .
T Consensus 173 ~~~gi~~s~dg~~l-v~~~~~~~i~~~~~~~~g~~~~~~~~~-~~~~~~p~~i~~d~~G~l~v~~-~------------- 236 (296)
T 3e5z_A 173 KPNGLAFLPSGNLL-VSDTGDNATHRYCLNARGETEYQGVHF-TVEPGKTDGLRVDAGGLIWASA-G------------- 236 (296)
T ss_dssp SEEEEEECTTSCEE-EEETTTTEEEEEEECSSSCEEEEEEEE-CCSSSCCCSEEEBTTSCEEEEE-T-------------
T ss_pred CCccEEECCCCCEE-EEeCCCCeEEEEEECCCCcCcCCCeEe-eCCCCCCCeEEECCCCCEEEEc-C-------------
Confidence 99999999999977 877654 3 3333 1112 223444 4445679999999999999997 2
Q ss_pred hHHHHHHhccchhhcccCCCCCCceEEEEEECCCCeEEEEEECCCCCcccceeEEEEE---CCEEEEEecCCCeEEEEeC
Q 018705 265 EKWELLDAYPGLISLLLPMGSDAGARVVKVDGNDGKIIRDFNDPDATYISFVTSAAEF---DGNLYLASLQSNFIGILPL 341 (351)
Q Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~g~~~~~~~~~~g~~~~~~~~~~~~---~g~L~ig~~~~~~i~~~~~ 341 (351)
++|.+||+ +|+.+..+..+.+ +++++.. ++.||+++. +++.++++
T Consensus 237 ------------------------~~v~~~~~-~g~~~~~~~~~~~-----~~~~~f~~~d~~~L~v~t~--~~l~~~~~ 284 (296)
T 3e5z_A 237 ------------------------DGVHVLTP-DGDELGRVLTPQT-----TSNLCFGGPEGRTLYMTVS--TEFWSIET 284 (296)
T ss_dssp ------------------------TEEEEECT-TSCEEEEEECSSC-----CCEEEEESTTSCEEEEEET--TEEEEEEC
T ss_pred ------------------------CeEEEECC-CCCEEEEEECCCC-----ceeEEEECCCCCEEEEEcC--CeEEEEEc
Confidence 36999999 8999988876653 4455542 357999994 78999997
Q ss_pred CCC
Q 018705 342 DGP 344 (351)
Q Consensus 342 ~~~ 344 (351)
.+.
T Consensus 285 ~~~ 287 (296)
T 3e5z_A 285 NVR 287 (296)
T ss_dssp SCC
T ss_pred ccc
Confidence 654
No 5
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=99.91 E-value=2.8e-22 Score=182.35 Aligned_cols=239 Identities=13% Similarity=0.131 Sum_probs=172.6
Q ss_pred eEecCCCcCCCceEEEeeCCCeE-EEEEcCCEEEEEEcCCCeEEEEeecCCccccceEEcCCCCEEEEeCCCCeEEEcC-
Q 018705 44 TKLGEGCVNHPEDVSVVVSKGAL-YTATRDGWVKYFILHNETLVNWKHIDSQSLLGLTTTKDGGVILCDNEKGLLKVTE- 121 (351)
Q Consensus 44 ~~i~~~~~~~pe~i~~d~~~g~l-yv~~~~g~I~~~d~~~g~~~~~~~~~~~p~~gl~~d~~G~L~v~d~~~gl~~~~~- 121 (351)
+.+.......+|+++|+++++.+ |++..+++|+++|+++++.+.+. ....|. +++++++|+||++. ..++++++.
T Consensus 5 ~~~~~~~~~~~Egp~w~~~~~~l~~~d~~~~~i~~~d~~~~~~~~~~-~~~~~~-~i~~~~dG~l~v~~-~~~l~~~d~~ 81 (297)
T 3g4e_A 5 ECVLPENCRCGESPVWEEVSNSLLFVDIPAKKVCRWDSFTKQVQRVT-MDAPVS-SVALRQSGGYVATI-GTKFCALNWK 81 (297)
T ss_dssp EEEECCCCSBEEEEEEETTTTEEEEEETTTTEEEEEETTTCCEEEEE-CSSCEE-EEEEBTTSSEEEEE-TTEEEEEETT
T ss_pred EEEeccCCccccCCeEECCCCEEEEEECCCCEEEEEECCCCcEEEEe-CCCceE-EEEECCCCCEEEEE-CCeEEEEECC
Confidence 44444446789999999766655 56667899999999888776553 346788 99999999999998 568999996
Q ss_pred CC-eEEecCC-----CCCcccEEEccCCcEEEEeCCCccCCcccccccccccCCceEEEEeCCCCeEEEeecCccccceE
Q 018705 122 EG-VEAIVPD-----ASFTNDVIAASDGTLYFTVASTKYTPTDFYKDMAEGKPYGQLRKYDPKLKETTVLHEGFYFANGI 195 (351)
Q Consensus 122 ~g-~~~l~~~-----~~~~n~l~~d~dG~ly~t~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~~~~~~~~~~~~~~ngi 195 (351)
++ .+.+... ...+|++++|++|++|++++..... ........+.|++++++ ++...+...+..|||+
T Consensus 82 ~g~~~~~~~~~~~~~~~~~~di~~d~dG~l~~~~~~~~~~------~~~~~~~~~~l~~~d~~-g~~~~~~~~~~~pngi 154 (297)
T 3g4e_A 82 EQSAVVLATVDNDKKNNRFNDGKVDPAGRYFAGTMAEETA------PAVLERHQGALYSLFPD-HHVKKYFDQVDISNGL 154 (297)
T ss_dssp TTEEEEEEECCTTCSSEEEEEEEECTTSCEEEEEEECCSB------TTBCCTTCEEEEEECTT-SCEEEEEEEESBEEEE
T ss_pred CCcEEEEEecCCCCCCCCCCCEEECCCCCEEEecCCcccc------cccccCCCcEEEEEECC-CCEEEEeeccccccce
Confidence 56 6555432 2579999999999999988541100 00011235689999986 5666667778889999
Q ss_pred EEcCCCCEEEEEecce-eEEeec--CCCCc---eeEEec--cCCCCCCceEECCCCCEEEEEecCCchhhhhhhcChhHH
Q 018705 196 ALSKNEDFVVVCESWK-RYWLKG--DRAGI---LDAFIE--NLPGGPDNINLAPDGSFWIGLIKMNQTGVRAIQKCREKW 267 (351)
Q Consensus 196 ~~~~dg~~lyv~~~~~-~~~i~~--~~~~~---~~~~~~--~~~g~pd~i~~d~~G~lwva~~~~~~~~~~~~~~~~~~~ 267 (351)
++++|++.||++++.. +++.-+ ...+. .+.+.. ...+.|+++++|++|+||++....
T Consensus 155 ~~spdg~~lyv~~~~~~~i~~~~~d~~~G~~~~~~~~~~~~~~~~~p~g~~~d~~G~lwva~~~~--------------- 219 (297)
T 3g4e_A 155 DWSLDHKIFYYIDSLSYSVDAFDYDLQTGQISNRRSVYKLEKEEQIPDGMCIDAEGKLWVACYNG--------------- 219 (297)
T ss_dssp EECTTSCEEEEEEGGGTEEEEEEECTTTCCEEEEEEEEECCGGGCEEEEEEEBTTSCEEEEEETT---------------
T ss_pred EEcCCCCEEEEecCCCCcEEEEeccCCCCcccCcEEEEECCCCCCCCCeeEECCCCCEEEEEcCC---------------
Confidence 9999999999999765 443321 12222 234432 234679999999999999998642
Q ss_pred HHHHhccchhhcccCCCCCCceEEEEEECCCCeEEEEEECCCCCcccceeEEEEEC---CEEEEEecC
Q 018705 268 ELLDAYPGLISLLLPMGSDAGARVVKVDGNDGKIIRDFNDPDATYISFVTSAAEFD---GNLYLASLQ 332 (351)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~g~~~~~~~~~~g~~~~~~~~~~~~~---g~L~ig~~~ 332 (351)
+.|.+||+++|+.+..+..|. ..++++++.+ ++||+++..
T Consensus 220 ---------------------~~v~~~d~~tG~~~~~i~~p~----~~~t~~~f~g~d~~~L~vt~~~ 262 (297)
T 3g4e_A 220 ---------------------GRVIRLDPVTGKRLQTVKLPV----DKTTSCCFGGKNYSEMYVTCAR 262 (297)
T ss_dssp ---------------------TEEEEECTTTCCEEEEEECSS----SBEEEEEEESGGGCEEEEEEBC
T ss_pred ---------------------CEEEEEcCCCceEEEEEECCC----CCceEEEEeCCCCCEEEEEcCC
Confidence 369999994499998887663 2467777653 689999964
No 6
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=99.90 E-value=2.4e-21 Score=176.07 Aligned_cols=253 Identities=19% Similarity=0.274 Sum_probs=179.1
Q ss_pred eEecCCCcCCCceEEEeeCCCeEEEE--------EcCCEEEEEEcCCCeEEEEee-----cCCccccceEEcCC-CCEEE
Q 018705 44 TKLGEGCVNHPEDVSVVVSKGALYTA--------TRDGWVKYFILHNETLVNWKH-----IDSQSLLGLTTTKD-GGVIL 109 (351)
Q Consensus 44 ~~i~~~~~~~pe~i~~d~~~g~lyv~--------~~~g~I~~~d~~~g~~~~~~~-----~~~~p~~gl~~d~~-G~L~v 109 (351)
+.+..+ +..|++++++ .++.+|++ ..+++|+++++.+++++.+.. ....|. ++++|++ |+||+
T Consensus 11 ~~~~~~-~~~~~~~~~~-~~g~l~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~-~i~~~~~~g~l~v 87 (314)
T 1pjx_A 11 TKVTED-IPGAEGPVFD-KNGDFYIVAPEVEVNGKPAGEILRIDLKTGKKTVICKPEVNGYGGIPA-GCQCDRDANQLFV 87 (314)
T ss_dssp EEEECC-CTTCEEEEEC-TTSCEEEEETTCEETTEECCEEEEECTTTCCEEEEECCEETTEECCEE-EEEECSSSSEEEE
T ss_pred hhhhcc-CCCccCceEC-CCCCEEEEEeccccCCCCCCEEEEEeCCCCcEEEEEecccCCCCCCCc-eEEEecCCCcEEE
Confidence 445544 7899999999 67778877 678899999987888876643 335688 9999999 99999
Q ss_pred EeCCCCeEEEcCCC-eEEe-cCC-----CCCcccEEEccCCcEEEEeCCCccCCcccccccccccCCceEEEEeCCCCeE
Q 018705 110 CDNEKGLLKVTEEG-VEAI-VPD-----ASFTNDVIAASDGTLYFTVASTKYTPTDFYKDMAEGKPYGQLRKYDPKLKET 182 (351)
Q Consensus 110 ~d~~~gl~~~~~~g-~~~l-~~~-----~~~~n~l~~d~dG~ly~t~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~~~~ 182 (351)
++...++++++.+| .+.+ ... ...|+++++|++|++|+++.........+. .......++|++++++ ++.
T Consensus 88 ~~~~~~l~~~d~~g~~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~--~~~~~~~~~l~~~~~~-g~~ 164 (314)
T 1pjx_A 88 ADMRLGLLVVQTDGTFEEIAKKDSEGRRMQGCNDCAFDYEGNLWITAPAGEVAPADYT--RSMQEKFGSIYCFTTD-GQM 164 (314)
T ss_dssp EETTTEEEEEETTSCEEECCSBCTTSCBCBCCCEEEECTTSCEEEEECBCBCTTSCCC--BTTSSSCEEEEEECTT-SCE
T ss_pred EECCCCEEEEeCCCCEEEEEeccCCCccccCCcCEEECCCCCEEEEecCccccccccc--ccccCCCCeEEEECCC-CCE
Confidence 99877899998668 6655 321 156999999999999999864210000000 0011234689999987 777
Q ss_pred EEeecCccccceEEEc----CCCCEEEEEecce----eEEeec-CCCCceeEEeccCC----CCCCceEECCCCCEEEEE
Q 018705 183 TVLHEGFYFANGIALS----KNEDFVVVCESWK----RYWLKG-DRAGILDAFIENLP----GGPDNINLAPDGSFWIGL 249 (351)
Q Consensus 183 ~~~~~~~~~~ngi~~~----~dg~~lyv~~~~~----~~~i~~-~~~~~~~~~~~~~~----g~pd~i~~d~~G~lwva~ 249 (351)
+.+......|++++++ ++++.+|+++... ++.... ......+.+.. .+ +.|+++++|++|++|++.
T Consensus 165 ~~~~~~~~~~~~i~~~~~~d~dg~~l~v~~~~~~~i~~~~~~~~g~~~~~~~~~~-~~~~~~~~p~~i~~d~~G~l~v~~ 243 (314)
T 1pjx_A 165 IQVDTAFQFPNGIAVRHMNDGRPYQLIVAETPTKKLWSYDIKGPAKIENKKVWGH-IPGTHEGGADGMDFDEDNNLLVAN 243 (314)
T ss_dssp EEEEEEESSEEEEEEEECTTSCEEEEEEEETTTTEEEEEEEEETTEEEEEEEEEE-CCCCSSCEEEEEEEBTTCCEEEEE
T ss_pred EEeccCCCCcceEEEecccCCCCCEEEEEECCCCeEEEEECCCCCccccceEEEE-CCCCCCCCCCceEECCCCCEEEEE
Confidence 6666666789999999 9998899998654 333331 11111223321 22 568899999999999997
Q ss_pred ecCCchhhhhhhcChhHHHHHHhccchhhcccCCCCCCceEEEEEECCC-CeEEEEEECCCCCcccceeEEEEE-CC-EE
Q 018705 250 IKMNQTGVRAIQKCREKWELLDAYPGLISLLLPMGSDAGARVVKVDGND-GKIIRDFNDPDATYISFVTSAAEF-DG-NL 326 (351)
Q Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-g~~~~~~~~~~g~~~~~~~~~~~~-~g-~L 326 (351)
... ++|.++|+ + |+.+..+..+. ..++++... +| .|
T Consensus 244 ~~~------------------------------------~~i~~~d~-~~g~~~~~~~~~~----~~~~~i~~~~dg~~l 282 (314)
T 1pjx_A 244 WGS------------------------------------SHIEVFGP-DGGQPKMRIRCPF----EKPSNLHFKPQTKTI 282 (314)
T ss_dssp ETT------------------------------------TEEEEECT-TCBSCSEEEECSS----SCEEEEEECTTSSEE
T ss_pred cCC------------------------------------CEEEEEcC-CCCcEeEEEeCCC----CCceeEEECCCCCEE
Confidence 531 36999999 6 88777776543 246666654 34 49
Q ss_pred EEEecCCCeEEEEeCCCC
Q 018705 327 YLASLQSNFIGILPLDGP 344 (351)
Q Consensus 327 ~ig~~~~~~i~~~~~~~~ 344 (351)
|+++...++|.++++...
T Consensus 283 ~v~~~~~~~l~~~~~~~~ 300 (314)
T 1pjx_A 283 FVTEHENNAVWKFEWQRN 300 (314)
T ss_dssp EEEETTTTEEEEEECSSC
T ss_pred EEEeCCCCeEEEEeCCCC
Confidence 999987889999997643
No 7
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=99.86 E-value=8.8e-19 Score=157.47 Aligned_cols=239 Identities=13% Similarity=0.176 Sum_probs=169.0
Q ss_pred CCcCCCceEEEeeCCCeEEEE-EcCCEEEEEEcCCCeEEEEeec------CCccccceEE-cCCCCEEEEeC--CCCeEE
Q 018705 49 GCVNHPEDVSVVVSKGALYTA-TRDGWVKYFILHNETLVNWKHI------DSQSLLGLTT-TKDGGVILCDN--EKGLLK 118 (351)
Q Consensus 49 ~~~~~pe~i~~d~~~g~lyv~-~~~g~I~~~d~~~g~~~~~~~~------~~~p~~gl~~-d~~G~L~v~d~--~~gl~~ 118 (351)
+++..|.+++++ .++.+|++ ..+++|.+++++......+... ...|. ++++ +++|+||+++. ...+.+
T Consensus 27 g~~~~p~~v~~~-~~g~l~v~~~~~~~i~~~d~~g~~~~~~~~~~~~~~~~~~p~-~i~~~~~~g~l~v~~~~~~~~i~~ 104 (286)
T 1q7f_A 27 GQFTEPSGVAVN-AQNDIIVADTNNHRIQIFDKEGRFKFQFGECGKRDSQLLYPN-RVAVVRNSGDIIVTERSPTHQIQI 104 (286)
T ss_dssp TCBSCEEEEEEC-TTCCEEEEEGGGTEEEEECTTSCEEEEECCBSSSTTCBSSEE-EEEEETTTTEEEEEECGGGCEEEE
T ss_pred CccCCCceEEEC-CCCCEEEEECCCCEEEEECCCCcEEEEecccCCCcccccCce-EEEEEcCCCeEEEEcCCCCCEEEE
Confidence 457889999999 46678876 4678999999854434444321 14688 9999 58999999995 456777
Q ss_pred EcCCC--eEEecCC-CCCcccEEEccCCcEEEEeCCCccCCcccccccccccCCceEEEEeCCCCeEEEee--cCccccc
Q 018705 119 VTEEG--VEAIVPD-ASFTNDVIAASDGTLYFTVASTKYTPTDFYKDMAEGKPYGQLRKYDPKLKETTVLH--EGFYFAN 193 (351)
Q Consensus 119 ~~~~g--~~~l~~~-~~~~n~l~~d~dG~ly~t~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~~~~~~~~--~~~~~~n 193 (351)
++++| .+.+... ...|++++++++|++|+++.. .++|++||+++.....+. ..+..|+
T Consensus 105 ~d~~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~-----------------~~~i~~~~~~g~~~~~~~~~~~~~~p~ 167 (286)
T 1q7f_A 105 YNQYGQFVRKFGATILQHPRGVTVDNKGRIIVVECK-----------------VMRVIIFDQNGNVLHKFGCSKHLEFPN 167 (286)
T ss_dssp ECTTSCEEEEECTTTCSCEEEEEECTTSCEEEEETT-----------------TTEEEEECTTSCEEEEEECTTTCSSEE
T ss_pred ECCCCcEEEEecCccCCCceEEEEeCCCCEEEEECC-----------------CCEEEEEcCCCCEEEEeCCCCccCCcE
Confidence 87777 4445332 367999999999999999865 468999998755444443 3456799
Q ss_pred eEEEcCCCCEEEEEecce-eEEeecCCCCceeEEec-cCCCCCCceEECCCCCEEEEEecCCchhhhhhhcChhHHHHHH
Q 018705 194 GIALSKNEDFVVVCESWK-RYWLKGDRAGILDAFIE-NLPGGPDNINLAPDGSFWIGLIKMNQTGVRAIQKCREKWELLD 271 (351)
Q Consensus 194 gi~~~~dg~~lyv~~~~~-~~~i~~~~~~~~~~~~~-~~~g~pd~i~~d~~G~lwva~~~~~~~~~~~~~~~~~~~~~~~ 271 (351)
+|+++++|+ +|+++... ++.+-+........+.. .....|.++++|++|++|++....
T Consensus 168 ~i~~~~~g~-l~v~~~~~~~i~~~~~~g~~~~~~~~~g~~~~p~~i~~d~~G~l~v~~~~~------------------- 227 (286)
T 1q7f_A 168 GVVVNDKQE-IFISDNRAHCVKVFNYEGQYLRQIGGEGITNYPIGVGINSNGEILIADNHN------------------- 227 (286)
T ss_dssp EEEECSSSE-EEEEEGGGTEEEEEETTCCEEEEESCTTTSCSEEEEEECTTCCEEEEECSS-------------------
T ss_pred EEEECCCCC-EEEEECCCCEEEEEcCCCCEEEEEccCCccCCCcEEEECCCCCEEEEeCCC-------------------
Confidence 999999997 99998755 43332222222222321 111368899999999999997531
Q ss_pred hccchhhcccCCCCCCceEEEEEECCCCeEEEEEECCCCCcccceeEEEEE-CCEEEEEecCCCeEEEEeCCCCCC
Q 018705 272 AYPGLISLLLPMGSDAGARVVKVDGNDGKIIRDFNDPDATYISFVTSAAEF-DGNLYLASLQSNFIGILPLDGPEP 346 (351)
Q Consensus 272 ~~~~~~~~~~~~~~~~~~~v~~~~~~~g~~~~~~~~~~g~~~~~~~~~~~~-~g~L~ig~~~~~~i~~~~~~~~~~ 346 (351)
...|.+|++ +|+.+..+..... ...+.++... +|+||+++. .+.|.++++....|
T Consensus 228 ----------------~~~i~~~~~-~g~~~~~~~~~~~--~~~~~~i~~~~~g~l~vs~~-~~~v~v~~~~~~~p 283 (286)
T 1q7f_A 228 ----------------NFNLTIFTQ-DGQLISALESKVK--HAQCFDVALMDDGSVVLASK-DYRLYIYRYVQLAP 283 (286)
T ss_dssp ----------------SCEEEEECT-TSCEEEEEEESSC--CSCEEEEEEETTTEEEEEET-TTEEEEEECSCCCC
T ss_pred ----------------CEEEEEECC-CCCEEEEEcccCC--CCcceeEEECCCCcEEEECC-CCeEEEEEcccccc
Confidence 126899999 9998888864322 2235566654 689999975 78999999877666
No 8
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=99.86 E-value=4.4e-19 Score=161.95 Aligned_cols=225 Identities=17% Similarity=0.222 Sum_probs=158.3
Q ss_pred ceEecCCCcCCCceEEEeeCCCeEEEEE-cCCEEEEEEcCCCeEEEEeecCCccccceEEcCCCCEEEEeCCC-C--eEE
Q 018705 43 LTKLGEGCVNHPEDVSVVVSKGALYTAT-RDGWVKYFILHNETLVNWKHIDSQSLLGLTTTKDGGVILCDNEK-G--LLK 118 (351)
Q Consensus 43 ~~~i~~~~~~~pe~i~~d~~~g~lyv~~-~~g~I~~~d~~~g~~~~~~~~~~~p~~gl~~d~~G~L~v~d~~~-g--l~~ 118 (351)
+..+..+ ..||++++++ ++.+|+.. .+++|+++|++ ++...+......|. +++++++|+||+++... + +++
T Consensus 25 ~~~~p~~--~~pegia~~~-~g~lyv~d~~~~~I~~~d~~-g~~~~~~~~~~~p~-gia~~~dG~l~vad~~~~~~~v~~ 99 (306)
T 2p4o_A 25 ITSFPVN--TFLENLASAP-DGTIFVTNHEVGEIVSITPD-GNQQIHATVEGKVS-GLAFTSNGDLVATGWNADSIPVVS 99 (306)
T ss_dssp EEEECTT--CCEEEEEECT-TSCEEEEETTTTEEEEECTT-CCEEEEEECSSEEE-EEEECTTSCEEEEEECTTSCEEEE
T ss_pred eEeCCCC--CCcceEEECC-CCCEEEEeCCCCeEEEECCC-CceEEEEeCCCCce-eEEEcCCCcEEEEeccCCcceEEE
Confidence 3444444 5799999995 66677765 68899999985 44544445567899 99999999999999542 3 788
Q ss_pred Ec-CCC-eEEecCC--CCCcccEEEccCCcEEEEeCCCccCCcccccccccccCCceEEEEeCCCCeEEEe---------
Q 018705 119 VT-EEG-VEAIVPD--ASFTNDVIAASDGTLYFTVASTKYTPTDFYKDMAEGKPYGQLRKYDPKLKETTVL--------- 185 (351)
Q Consensus 119 ~~-~~g-~~~l~~~--~~~~n~l~~d~dG~ly~t~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~~~~~~~--------- 185 (351)
++ ++| .+.+... ..++++++..+++.+|+++.. .++||++|+.+++.+..
T Consensus 100 ~d~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~v~d~~-----------------~g~i~~~d~~~~~~~v~~~~~~~~~~ 162 (306)
T 2p4o_A 100 LVKSDGTVETLLTLPDAIFLNGITPLSDTQYLTADSY-----------------RGAIWLIDVVQPSGSIWLEHPMLARS 162 (306)
T ss_dssp EECTTSCEEEEEECTTCSCEEEEEESSSSEEEEEETT-----------------TTEEEEEETTTTEEEEEEECGGGSCS
T ss_pred EcCCCCeEEEEEeCCCccccCcccccCCCcEEEEECC-----------------CCeEEEEeCCCCcEeEEEECCccccc
Confidence 87 477 6555432 267888888888889999864 46899999876543322
Q ss_pred --ecCccccceEEEcCCCCEEEEEecce----eEEeec-CCCCceeEEeccCCCCCCceEECCCCCEEEEEecCCchhhh
Q 018705 186 --HEGFYFANGIALSKNEDFVVVCESWK----RYWLKG-DRAGILDAFIENLPGGPDNINLAPDGSFWIGLIKMNQTGVR 258 (351)
Q Consensus 186 --~~~~~~~ngi~~~~dg~~lyv~~~~~----~~~i~~-~~~~~~~~~~~~~~g~pd~i~~d~~G~lwva~~~~~~~~~~ 258 (351)
...+..|||| ++|++.||++++.+ +|.+.. ...+..+.+.. . ..|+++++|++|+|||+....
T Consensus 163 ~~~~~~~~pngi--s~dg~~lyv~d~~~~~I~~~~~~~~g~~~~~~~~~~-~-~~P~gi~vd~dG~l~va~~~~------ 232 (306)
T 2p4o_A 163 NSESVFPAANGL--KRFGNFLYVSNTEKMLLLRIPVDSTDKPGEPEIFVE-Q-TNIDDFAFDVEGNLYGATHIY------ 232 (306)
T ss_dssp STTCCSCSEEEE--EEETTEEEEEETTTTEEEEEEBCTTSCBCCCEEEEE-S-CCCSSEEEBTTCCEEEECBTT------
T ss_pred cccCCCCcCCCc--CcCCCEEEEEeCCCCEEEEEEeCCCCCCCccEEEec-c-CCCCCeEECCCCCEEEEeCCC------
Confidence 1245689998 88888999999876 344432 22333445543 2 469999999999999997531
Q ss_pred hhhcChhHHHHHHhccchhhcccCCCCCCceEEEEEECCCCeEEEEEECCCCCcccceeEEEEE-----CCEEEEEecC
Q 018705 259 AIQKCREKWELLDAYPGLISLLLPMGSDAGARVVKVDGNDGKIIRDFNDPDATYISFVTSAAEF-----DGNLYLASLQ 332 (351)
Q Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~g~~~~~~~~~~g~~~~~~~~~~~~-----~g~L~ig~~~ 332 (351)
+.|.+|++ +|+.......+.+ ...+++++.. +++||+++..
T Consensus 233 ------------------------------~~V~~~~~-~G~~~~~~~~~~~--~~~p~~~a~~g~~~d~~~LyVt~~~ 278 (306)
T 2p4o_A 233 ------------------------------NSVVRIAP-DRSTTIIAQAEQG--VIGSTAVAFGQTEGDCTAIYVVTNG 278 (306)
T ss_dssp ------------------------------CCEEEECT-TCCEEEEECGGGT--CTTEEEEEECCSTTTTTEEEEEECT
T ss_pred ------------------------------CeEEEECC-CCCEEEEeecccc--cCCceEEEEecccCCCCEEEEECCC
Confidence 35899999 8986443222222 3457777764 3799999864
No 9
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=99.86 E-value=3.8e-19 Score=170.28 Aligned_cols=237 Identities=13% Similarity=0.127 Sum_probs=172.1
Q ss_pred CcCCCceEEEeeC--CCeEEEEEcCCEEEEEEcCCCeEEEEeecCCccccceEEcCCCCEEEEeCC-----CCeEEEcCC
Q 018705 50 CVNHPEDVSVVVS--KGALYTATRDGWVKYFILHNETLVNWKHIDSQSLLGLTTTKDGGVILCDNE-----KGLLKVTEE 122 (351)
Q Consensus 50 ~~~~pe~i~~d~~--~g~lyv~~~~g~I~~~d~~~g~~~~~~~~~~~p~~gl~~d~~G~L~v~d~~-----~gl~~~~~~ 122 (351)
++..|++|++|++ ++.||+....++|+++++.++++..+......|. ++++|++|+||+++.. .+++.+.++
T Consensus 137 ~~~~P~gvavd~~s~~g~Lyv~D~~~~I~~id~~~g~v~~~~~~~~~P~-giavd~dG~lyVad~~~~~~~~gv~~~~~~ 215 (433)
T 4hw6_A 137 AFDNIWRMMFDPNSNYDDLYWVGQRDAFRHVDFVNQYVDIKTTNIGQCA-DVNFTLNGDMVVVDDQSSDTNTGIYLFTRA 215 (433)
T ss_dssp CCSCCCEEEECTTTTTCEEEEECBTSCEEEEETTTTEEEEECCCCSCEE-EEEECTTCCEEEEECCSCTTSEEEEEECGG
T ss_pred ccCCCceEEEccccCCCEEEEEeCCCCEEEEECCCCEEEEeecCCCCcc-EEEECCCCCEEEEcCCCCcccceEEEEECC
Confidence 6789999999963 6899998766889999998898887766667799 9999999999999973 256767653
Q ss_pred C--e--EEecCCCCCcccEEEcc-CCcEEEEeCCCccCCcccccccccccCCceEEEEeCCCCeE-EEeec--Cccccce
Q 018705 123 G--V--EAIVPDASFTNDVIAAS-DGTLYFTVASTKYTPTDFYKDMAEGKPYGQLRKYDPKLKET-TVLHE--GFYFANG 194 (351)
Q Consensus 123 g--~--~~l~~~~~~~n~l~~d~-dG~ly~t~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~~~~-~~~~~--~~~~~ng 194 (351)
+ . ..+. ....|+++++|+ +|+|||++.. .++|++|+++++++ +.+.. ....+.+
T Consensus 216 ~~~~~~~~~~-~~~~P~giavd~~~G~lyv~d~~-----------------~~~V~~~d~~~g~~~~~~~~~~~~~~~~~ 277 (433)
T 4hw6_A 216 SGFTERLSLC-NARGAKTCAVHPQNGKIYYTRYH-----------------HAMISSYDPATGTLTEEEVMMDTKGSNFH 277 (433)
T ss_dssp GTTCCEEEEE-ECSSBCCCEECTTTCCEEECBTT-----------------CSEEEEECTTTCCEEEEEEECSCCSSCEE
T ss_pred CCeecccccc-ccCCCCEEEEeCCCCeEEEEECC-----------------CCEEEEEECCCCeEEEEEeccCCCCCccc
Confidence 3 2 2333 237899999999 8999999975 46899999987776 33322 2234668
Q ss_pred EEEcCCCCEEEEEecce-eEEeec--C---CCCceeEEecc--CCC------------CCCceEE---------CCCCCE
Q 018705 195 IALSKNEDFVVVCESWK-RYWLKG--D---RAGILDAFIEN--LPG------------GPDNINL---------APDGSF 245 (351)
Q Consensus 195 i~~~~dg~~lyv~~~~~-~~~i~~--~---~~~~~~~~~~~--~~g------------~pd~i~~---------d~~G~l 245 (351)
|+++++|+.|||++..+ +++..+ . .......++.. ..+ .|.++++ |++|+|
T Consensus 278 ia~dpdG~~LYvad~~~~~I~~~~~d~~~~~~~~~~~~ag~~g~~g~~dg~~~~a~~~~P~giav~~n~~y~~dd~~g~l 357 (433)
T 4hw6_A 278 IVWHPTGDWAYIIYNGKHCIYRVDYNRETGKLAVPYIVCGQHSSPGWVDGMGTGARLWGPNQGIFVKNEAYAGEEDEYDF 357 (433)
T ss_dssp EEECTTSSEEEEEETTTTEEEEEEBCTTTCCBCCCEEEEECTTCCCCBCEEGGGSBCSSEEEEEEEECGGGTTSSCCEEE
T ss_pred EEEeCCCCEEEEEeCCCCEEEEEeCCCCCcccCcEEEEEecCCCCccCCCcccceEEcCCccEEEEccccccccCCCCcE
Confidence 99999999999999876 544321 1 11122233321 112 3677999 999999
Q ss_pred EEEEecCCchhhhhhhcChhHHHHHHhccchhhcccCCCCCCceEEEEEECCCCeEEEEEECC--------CC-----Cc
Q 018705 246 WIGLIKMNQTGVRAIQKCREKWELLDAYPGLISLLLPMGSDAGARVVKVDGNDGKIIRDFNDP--------DA-----TY 312 (351)
Q Consensus 246 wva~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~g~~~~~~~~~--------~g-----~~ 312 (351)
||+... ...|.+|++ +|++....... +| ..
T Consensus 358 yvaD~~------------------------------------n~~I~~~~~-~G~v~t~~G~g~~~~~G~~dG~~~~~~~ 400 (433)
T 4hw6_A 358 YFCDRD------------------------------------SHTVRVLTP-EGRVTTYAGRGNSREWGYVDGELRSQAL 400 (433)
T ss_dssp EEEETT------------------------------------TTEEEEECT-TSEEEEEECCCTTCSSCCBCEETTTTCB
T ss_pred EEEECC------------------------------------CCEEEEECC-CCCEEEEEeCCCCCccccCCCccccccE
Confidence 999753 236889999 99765444221 11 12
Q ss_pred ccceeEEEEE--CCEEEEEecCCCeEEEEeCC
Q 018705 313 ISFVTSAAEF--DGNLYLASLQSNFIGILPLD 342 (351)
Q Consensus 313 ~~~~~~~~~~--~g~L~ig~~~~~~i~~~~~~ 342 (351)
+..+.+++.+ +|.||++...+.+|.++.+.
T Consensus 401 ~~~P~giavd~~~g~lyVaD~~n~rIr~i~~e 432 (433)
T 4hw6_A 401 FNHPTSIAYDMKRKCFYIGDCDNHRVRKIAPE 432 (433)
T ss_dssp CSSEEEEEEETTTTEEEEEEGGGTEEEEEEEC
T ss_pred eCCCcEEEEECCCCEEEEEeCCCCEEEEEecC
Confidence 4457788866 79999999999999998864
No 10
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=99.86 E-value=3.5e-19 Score=164.08 Aligned_cols=235 Identities=17% Similarity=0.182 Sum_probs=170.3
Q ss_pred CceEecCCCcCCCceEEEeeCCCeE-EEEEcCCEEEEEEcCCCeEEEEeecCCccccceEEcCCCCEEEEeCCCCeEEEc
Q 018705 42 GLTKLGEGCVNHPEDVSVVVSKGAL-YTATRDGWVKYFILHNETLVNWKHIDSQSLLGLTTTKDGGVILCDNEKGLLKVT 120 (351)
Q Consensus 42 ~~~~i~~~~~~~pe~i~~d~~~g~l-yv~~~~g~I~~~d~~~g~~~~~~~~~~~p~~gl~~d~~G~L~v~d~~~gl~~~~ 120 (351)
.+|.+.......+|+++++++++.+ |++..+++|+++++++++.+.+.. ...+. +++++++|++|++. ..++++++
T Consensus 39 ~~~~~~~~~~~~~egp~~~~~~~~l~~~d~~~~~i~~~d~~~~~~~~~~~-~~~v~-~i~~~~dg~l~v~~-~~gl~~~d 115 (326)
T 2ghs_A 39 AGRVLDETPMLLGEGPTFDPASGTAWWFNILERELHELHLASGRKTVHAL-PFMGS-ALAKISDSKQLIAS-DDGLFLRD 115 (326)
T ss_dssp CCEEEECSCCSBEEEEEEETTTTEEEEEEGGGTEEEEEETTTTEEEEEEC-SSCEE-EEEEEETTEEEEEE-TTEEEEEE
T ss_pred ceEEeeccCCCCCcCCeEeCCCCEEEEEECCCCEEEEEECCCCcEEEEEC-CCcce-EEEEeCCCeEEEEE-CCCEEEEE
Confidence 4677777656679999999766654 566678899999998887766543 35677 99999999999998 45799999
Q ss_pred C-CC-eEEecCC-----CCCcccEEEccCCcEEEEeCCCccCCcccccccccccCCceEEEEeCCCCeEEEeecCccccc
Q 018705 121 E-EG-VEAIVPD-----ASFTNDVIAASDGTLYFTVASTKYTPTDFYKDMAEGKPYGQLRKYDPKLKETTVLHEGFYFAN 193 (351)
Q Consensus 121 ~-~g-~~~l~~~-----~~~~n~l~~d~dG~ly~t~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~~~~~~~~~~~~~~n 193 (351)
. +| .+.+... ...++++++|++|++|+++.... .....++|++++ +++.+.+......++
T Consensus 116 ~~~g~~~~~~~~~~~~~~~~~~~i~~d~~G~l~v~~~~~~-----------~~~~~~~l~~~~--~g~~~~~~~~~~~~~ 182 (326)
T 2ghs_A 116 TATGVLTLHAELESDLPGNRSNDGRMHPSGALWIGTMGRK-----------AETGAGSIYHVA--KGKVTKLFADISIPN 182 (326)
T ss_dssp TTTCCEEEEECSSTTCTTEEEEEEEECTTSCEEEEEEETT-----------CCTTCEEEEEEE--TTEEEEEEEEESSEE
T ss_pred CCCCcEEEEeeCCCCCCCCCCCCEEECCCCCEEEEeCCCc-----------CCCCceEEEEEe--CCcEEEeeCCCcccC
Confidence 5 66 6555332 14689999999999999875310 011246899999 477776666667899
Q ss_pred eEEEcCCCCEEEEEecce-eEEeecC--CCC----ceeEEec--cCCCCCCceEECCCCCEEEEEecCCchhhhhhhcCh
Q 018705 194 GIALSKNEDFVVVCESWK-RYWLKGD--RAG----ILDAFIE--NLPGGPDNINLAPDGSFWIGLIKMNQTGVRAIQKCR 264 (351)
Q Consensus 194 gi~~~~dg~~lyv~~~~~-~~~i~~~--~~~----~~~~~~~--~~~g~pd~i~~d~~G~lwva~~~~~~~~~~~~~~~~ 264 (351)
++++++|++.+|++++.. ++++-+. ..+ ..+.+.. ...+.|+++++|++|+||+++...
T Consensus 183 ~i~~s~dg~~lyv~~~~~~~I~~~d~~~~~Gl~~~~~~~~~~~~~~~~~p~gi~~d~~G~lwva~~~~------------ 250 (326)
T 2ghs_A 183 SICFSPDGTTGYFVDTKVNRLMRVPLDARTGLPTGKAEVFIDSTGIKGGMDGSVCDAEGHIWNARWGE------------ 250 (326)
T ss_dssp EEEECTTSCEEEEEETTTCEEEEEEBCTTTCCBSSCCEEEEECTTSSSEEEEEEECTTSCEEEEEETT------------
T ss_pred CeEEcCCCCEEEEEECCCCEEEEEEcccccCCcccCceEEEECCCCCCCCCeeEECCCCCEEEEEeCC------------
Confidence 999999999999998754 4433221 122 2233332 234578999999999999997531
Q ss_pred hHHHHHHhccchhhcccCCCCCCceEEEEEECCCCeEEEEEECCCCCcccceeEEEEE---CCEEEEEecCC
Q 018705 265 EKWELLDAYPGLISLLLPMGSDAGARVVKVDGNDGKIIRDFNDPDATYISFVTSAAEF---DGNLYLASLQS 333 (351)
Q Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~g~~~~~~~~~~g~~~~~~~~~~~~---~g~L~ig~~~~ 333 (351)
++|.++|+ +|+.+..+..+.. .++++... ++.||+++...
T Consensus 251 ------------------------~~v~~~d~-~g~~~~~i~~~~~----~~~~~af~g~d~~~L~vt~~~~ 293 (326)
T 2ghs_A 251 ------------------------GAVDRYDT-DGNHIARYEVPGK----QTTCPAFIGPDASRLLVTSARE 293 (326)
T ss_dssp ------------------------TEEEEECT-TCCEEEEEECSCS----BEEEEEEESTTSCEEEEEEBCT
T ss_pred ------------------------CEEEEECC-CCCEEEEEECCCC----CcEEEEEecCCCCEEEEEecCC
Confidence 36999999 9998888876542 46777764 36899998765
No 11
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=99.85 E-value=2.9e-19 Score=158.86 Aligned_cols=234 Identities=17% Similarity=0.159 Sum_probs=162.0
Q ss_pred CCceEEEeeCCCeEEE-E-EcCCEEEEEEcCCCeEEEEeec-CCccccceEEcCCCCEEEEeCCCCeEEEcCCC--eEEe
Q 018705 53 HPEDVSVVVSKGALYT-A-TRDGWVKYFILHNETLVNWKHI-DSQSLLGLTTTKDGGVILCDNEKGLLKVTEEG--VEAI 127 (351)
Q Consensus 53 ~pe~i~~d~~~g~lyv-~-~~~g~I~~~d~~~g~~~~~~~~-~~~p~~gl~~d~~G~L~v~d~~~gl~~~~~~g--~~~l 127 (351)
.|+++++| .+|.+|+ + ..+++|.+++..++....+... ...|. ++++|++|+||+++..++++++++++ ...+
T Consensus 25 ~p~~i~~~-~~g~l~v~~~~~~~~i~~~~~~~~~~~~~~~~~~~~p~-~i~~~~~g~l~v~~~~~~i~~~d~~~~~~~~~ 102 (270)
T 1rwi_B 25 SPSGVAVD-SAGNVYVTSEGMYGRVVKLATGSTGTTVLPFNGLYQPQ-GLAVDGAGTVYVTDFNNRVVTLAAGSNNQTVL 102 (270)
T ss_dssp CEEEEEEC-TTCCEEEEECSSSCEEEEECC-----EECCCCSCCSCC-CEEECTTCCEEEEETTTEEEEECTTCSCCEEC
T ss_pred CccceEEC-CCCCEEEEccCCCCcEEEecCCCcccceEeeCCcCCcc-eeEECCCCCEEEEcCCCEEEEEeCCCceEeee
Confidence 89999999 4667888 7 4578999999755544433222 25688 99999999999999856788888755 4444
Q ss_pred cCC-CCCcccEEEccCCcEEEEeCCCccCCcccccccccccCCceEEEEeCCCCeEEEe-ecCccccceEEEcCCCCEEE
Q 018705 128 VPD-ASFTNDVIAASDGTLYFTVASTKYTPTDFYKDMAEGKPYGQLRKYDPKLKETTVL-HEGFYFANGIALSKNEDFVV 205 (351)
Q Consensus 128 ~~~-~~~~n~l~~d~dG~ly~t~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~~~~~~~-~~~~~~~ngi~~~~dg~~ly 205 (351)
... ...|++++++++|++|+++.. .++|++++..+...... ...+..|++|+++++|+ +|
T Consensus 103 ~~~~~~~p~~i~~~~~g~l~v~~~~-----------------~~~i~~~~~~~~~~~~~~~~~~~~p~~i~~~~~g~-l~ 164 (270)
T 1rwi_B 103 PFDGLNYPEGLAVDTQGAVYVADRG-----------------NNRVVKLAAGSKTQTVLPFTGLNDPDGVAVDNSGN-VY 164 (270)
T ss_dssp CCCSCSSEEEEEECTTCCEEEEEGG-----------------GTEEEEECTTCCSCEECCCCSCCSCCCEEECTTCC-EE
T ss_pred ecCCcCCCcceEECCCCCEEEEECC-----------------CCEEEEEECCCceeEeeccccCCCceeEEEeCCCC-EE
Confidence 322 367999999999999999864 46899998765443332 23456899999999998 99
Q ss_pred EEecce-eEEeecCCCCceeEEeccCCCCCCceEECCCCCEEEEEecCCchhhhhhhcChhHHHHHHhccchhhcccCCC
Q 018705 206 VCESWK-RYWLKGDRAGILDAFIENLPGGPDNINLAPDGSFWIGLIKMNQTGVRAIQKCREKWELLDAYPGLISLLLPMG 284 (351)
Q Consensus 206 v~~~~~-~~~i~~~~~~~~~~~~~~~~g~pd~i~~d~~G~lwva~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 284 (351)
+++... ++..-+................|.++++|++|++|++....
T Consensus 165 v~~~~~~~i~~~~~~~~~~~~~~~~~~~~p~~i~~d~~g~l~v~~~~~-------------------------------- 212 (270)
T 1rwi_B 165 VTDTDNNRVVKLEAESNNQVVLPFTDITAPWGIAVDEAGTVYVTEHNT-------------------------------- 212 (270)
T ss_dssp EEEGGGTEEEEECTTTCCEEECCCSSCCSEEEEEECTTCCEEEEETTT--------------------------------
T ss_pred EEECCCCEEEEEecCCCceEeecccCCCCceEEEECCCCCEEEEECCC--------------------------------
Confidence 998755 44333322222221111111458899999999999997531
Q ss_pred CCCceEEEEEECCCCeEEEEEECCCCCcccceeEEEEE-CCEEEEEecCCCeEEEEeCCCCCC
Q 018705 285 SDAGARVVKVDGNDGKIIRDFNDPDATYISFVTSAAEF-DGNLYLASLQSNFIGILPLDGPEP 346 (351)
Q Consensus 285 ~~~~~~v~~~~~~~g~~~~~~~~~~g~~~~~~~~~~~~-~g~L~ig~~~~~~i~~~~~~~~~~ 346 (351)
+.|.++++ +++....+.. .+ ...+.++..+ +|+||++...++.|.++++...+.
T Consensus 213 ----~~v~~~~~-~~~~~~~~~~-~~--~~~p~~i~~~~~g~l~v~~~~~~~v~~~~~~~~~~ 267 (270)
T 1rwi_B 213 ----NQVVKLLA-GSTTSTVLPF-TG--LNTPLAVAVDSDRTVYVADRGNDRVVKLTSLEHHH 267 (270)
T ss_dssp ----SCEEEECT-TCSCCEECCC-CS--CSCEEEEEECTTCCEEEEEGGGTEEEEECCCGGGS
T ss_pred ----CcEEEEcC-CCCcceeecc-CC--CCCceeEEECCCCCEEEEECCCCEEEEEcCCCccc
Confidence 35889999 7765433321 12 2456777765 578999999999999999876543
No 12
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=99.85 E-value=5e-19 Score=162.44 Aligned_cols=242 Identities=20% Similarity=0.250 Sum_probs=170.5
Q ss_pred cCCCceEEEeeCCCeEEE-EEcCCEEEEEEcCCCeEEEEe-ecCCccccceEEcCCCCEEEEeCCC-----CeEEEcCC-
Q 018705 51 VNHPEDVSVVVSKGALYT-ATRDGWVKYFILHNETLVNWK-HIDSQSLLGLTTTKDGGVILCDNEK-----GLLKVTEE- 122 (351)
Q Consensus 51 ~~~pe~i~~d~~~g~lyv-~~~~g~I~~~d~~~g~~~~~~-~~~~~p~~gl~~d~~G~L~v~d~~~-----gl~~~~~~- 122 (351)
...|+++++++ +|.+|+ +..+++|+++|+++++++.+. .....|. +++++++|+||+++... ++++++.+
T Consensus 44 ~~~~~~~~~~~-~g~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~-~i~~~~dg~l~v~~~~~~~~~~~i~~~d~~~ 121 (333)
T 2dg1_A 44 GLQLEGLNFDR-QGQLFLLDVFEGNIFKINPETKEIKRPFVSHKANPA-AIKIHKDGRLFVCYLGDFKSTGGIFAATENG 121 (333)
T ss_dssp CCCEEEEEECT-TSCEEEEETTTCEEEEECTTTCCEEEEEECSSSSEE-EEEECTTSCEEEEECTTSSSCCEEEEECTTS
T ss_pred CccccCcEECC-CCCEEEEECCCCEEEEEeCCCCcEEEEeeCCCCCcc-eEEECCCCcEEEEeCCCCCCCceEEEEeCCC
Confidence 56799999995 556765 667889999999888877654 3446788 99999999999998765 78888864
Q ss_pred C-eE-EecCC--CCCcccEEEccCCcEEEEeCCCccCCcccccccccccCCceEEEEeCCCCeEEEeecCccccceEEEc
Q 018705 123 G-VE-AIVPD--ASFTNDVIAASDGTLYFTVASTKYTPTDFYKDMAEGKPYGQLRKYDPKLKETTVLHEGFYFANGIALS 198 (351)
Q Consensus 123 g-~~-~l~~~--~~~~n~l~~d~dG~ly~t~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~~~~~~~~~~~~~~ngi~~~ 198 (351)
+ .+ .+... ...+++++++++|++|+++.... .....++|+++|+++++.+.+......+++++++
T Consensus 122 ~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~-----------~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~ 190 (333)
T 2dg1_A 122 DNLQDIIEDLSTAYCIDDMVFDSKGGFYFTDFRGY-----------STNPLGGVYYVSPDFRTVTPIIQNISVANGIALS 190 (333)
T ss_dssp CSCEEEECSSSSCCCEEEEEECTTSCEEEEECCCB-----------TTBCCEEEEEECTTSCCEEEEEEEESSEEEEEEC
T ss_pred CEEEEEEccCccCCcccceEECCCCCEEEEecccc-----------ccCCCceEEEEeCCCCEEEEeecCCCcccceEEC
Confidence 4 44 33321 26799999999999999986310 0112468999999877777666666779999999
Q ss_pred CCCCEEEEEecce----eEEeecCCCCce-----eEEeccCC--CCCCceEECCCCCEEEEEecCCchhhhhhhcChhHH
Q 018705 199 KNEDFVVVCESWK----RYWLKGDRAGIL-----DAFIENLP--GGPDNINLAPDGSFWIGLIKMNQTGVRAIQKCREKW 267 (351)
Q Consensus 199 ~dg~~lyv~~~~~----~~~i~~~~~~~~-----~~~~~~~~--g~pd~i~~d~~G~lwva~~~~~~~~~~~~~~~~~~~ 267 (351)
+||+.+|+++... ++.+... .... +.+. ..+ ..|+++++|++|++|+++...
T Consensus 191 ~dg~~l~v~~~~~~~i~~~d~~~~-g~~~~~~~~~~~~-~~~~~~~~~~i~~d~~G~l~v~~~~~--------------- 253 (333)
T 2dg1_A 191 TDEKVLWVTETTANRLHRIALEDD-GVTIQPFGATIPY-YFTGHEGPDSCCIDSDDNLYVAMYGQ--------------- 253 (333)
T ss_dssp TTSSEEEEEEGGGTEEEEEEECTT-SSSEEEEEEEEEE-ECCSSSEEEEEEEBTTCCEEEEEETT---------------
T ss_pred CCCCEEEEEeCCCCeEEEEEecCC-CcCcccccceEEE-ecCCCCCCCceEECCCCCEEEEEcCC---------------
Confidence 9999899988644 3333211 1111 1111 112 368899999999999997531
Q ss_pred HHHHhccchhhcccCCCCCCceEEEEEECCCCeEEEEEECCCCC--cccceeEEEEE--CCEEEEEecCC-----CeEEE
Q 018705 268 ELLDAYPGLISLLLPMGSDAGARVVKVDGNDGKIIRDFNDPDAT--YISFVTSAAEF--DGNLYLASLQS-----NFIGI 338 (351)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~g~~~~~~~~~~g~--~~~~~~~~~~~--~g~L~ig~~~~-----~~i~~ 338 (351)
++|.++|+ +|+.+..+..+... ....+++++.. +++||+++..+ ..|.+
T Consensus 254 ---------------------~~v~~~d~-~g~~~~~~~~~~~~~g~~~~~~~~~~~~dg~~L~v~~~~g~~~~~~~l~~ 311 (333)
T 2dg1_A 254 ---------------------GRVLVFNK-RGYPIGQILIPGRDEGHMLRSTHPQFIPGTNQLIICSNDIEMGGGSMLYT 311 (333)
T ss_dssp ---------------------TEEEEECT-TSCEEEEEECTTGGGTCSCBCCEEEECTTSCEEEEEEECGGGTCCEEEEE
T ss_pred ---------------------CEEEEECC-CCCEEEEEEcCCCccccccCcceEEECCCCCEEEEEeCccCCCCCceEEE
Confidence 36899999 99988888754320 01135556553 35899998753 37888
Q ss_pred EeCCCC
Q 018705 339 LPLDGP 344 (351)
Q Consensus 339 ~~~~~~ 344 (351)
+++...
T Consensus 312 ~~~~~~ 317 (333)
T 2dg1_A 312 VNGFAK 317 (333)
T ss_dssp EECSSC
T ss_pred EecccC
Confidence 886543
No 13
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=99.84 E-value=6.8e-18 Score=151.64 Aligned_cols=229 Identities=17% Similarity=0.283 Sum_probs=168.0
Q ss_pred cCCCceEEEeeCCCeEEEEEc-CCEEEEEEcCCCeEEEEee--cCCccccceEEcCCCCEEEEeCC-CCeEEEcCCC-eE
Q 018705 51 VNHPEDVSVVVSKGALYTATR-DGWVKYFILHNETLVNWKH--IDSQSLLGLTTTKDGGVILCDNE-KGLLKVTEEG-VE 125 (351)
Q Consensus 51 ~~~pe~i~~d~~~g~lyv~~~-~g~I~~~d~~~g~~~~~~~--~~~~p~~gl~~d~~G~L~v~d~~-~gl~~~~~~g-~~ 125 (351)
...|.++++| .+|.+|++.. +++|.++++. +++..+.. ....|. ++++|++|++|+++.. ++++++++++ .+
T Consensus 14 ~~~~~~i~~d-~~g~l~v~~~~~~~v~~~d~~-~~~~~~~~~~~~~~~~-~i~~~~~g~l~v~~~~~~~i~~~~~~g~~~ 90 (299)
T 2z2n_A 14 DTGPYGITVS-DKGKVWITQHKANMISCINLD-GKITEYPLPTPDAKVM-CLTISSDGEVWFTENAANKIGRITKKGIIK 90 (299)
T ss_dssp SCCEEEEEEC-TTSCEEEEETTTTEEEEECTT-CCEEEEECSSTTCCEE-EEEECTTSCEEEEETTTTEEEEECTTSCEE
T ss_pred CCCccceEEC-CCCCEEEEecCCCcEEEEcCC-CCeEEecCCcccCcee-eEEECCCCCEEEeCCCCCeEEEECCCCcEE
Confidence 5689999999 6788999886 6889999986 77766542 245688 9999999999999874 4588888777 55
Q ss_pred EecC--CCCCcccEEEccCCcEEEEeCCCccCCcccccccccccCCceEEEEeCCCCeEEEee--cCccccceEEEcCCC
Q 018705 126 AIVP--DASFTNDVIAASDGTLYFTVASTKYTPTDFYKDMAEGKPYGQLRKYDPKLKETTVLH--EGFYFANGIALSKNE 201 (351)
Q Consensus 126 ~l~~--~~~~~n~l~~d~dG~ly~t~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~~~~~~~~--~~~~~~ngi~~~~dg 201 (351)
.+.. ....|++++++++|++|+++.. .++|+++|+ +++...+. .....|++++++++|
T Consensus 91 ~~~~~~~~~~~~~i~~~~~g~l~v~~~~-----------------~~~i~~~d~-~g~~~~~~~~~~~~~~~~i~~~~~g 152 (299)
T 2z2n_A 91 EYTLPNPDSAPYGITEGPNGDIWFTEMN-----------------GNRIGRITD-DGKIREYELPNKGSYPSFITLGSDN 152 (299)
T ss_dssp EEECSSTTCCEEEEEECTTSCEEEEETT-----------------TTEEEEECT-TCCEEEEECSSTTCCEEEEEECTTS
T ss_pred EEeCCCcCCCceeeEECCCCCEEEEecC-----------------CceEEEECC-CCCEEEecCCCCCCCCceEEEcCCC
Confidence 5432 2368999999999999999864 368999998 56665443 235679999999999
Q ss_pred CEEEEEecce-eEEeecCCCCceeEEe-ccCCCCCCceEECCCCCEEEEEecCCchhhhhhhcChhHHHHHHhccchhhc
Q 018705 202 DFVVVCESWK-RYWLKGDRAGILDAFI-ENLPGGPDNINLAPDGSFWIGLIKMNQTGVRAIQKCREKWELLDAYPGLISL 279 (351)
Q Consensus 202 ~~lyv~~~~~-~~~i~~~~~~~~~~~~-~~~~g~pd~i~~d~~G~lwva~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 279 (351)
+ +|+++... .+..-+. .++...+. ......|.++++|++|++|++...
T Consensus 153 ~-l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~---------------------------- 202 (299)
T 2z2n_A 153 A-LWFTENQNNAIGRITE-SGDITEFKIPTPASGPVGITKGNDDALWFVEII---------------------------- 202 (299)
T ss_dssp C-EEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECTTSSEEEEETT----------------------------
T ss_pred C-EEEEeCCCCEEEEEcC-CCcEEEeeCCCCCCcceeEEECCCCCEEEEccC----------------------------
Confidence 7 99988654 4333333 34444331 111235778999999999999743
Q ss_pred ccCCCCCCceEEEEEECCCCeEEEEEECCCCCcccceeEEEEE-CCEEEEEecCCCeEEEEeCC
Q 018705 280 LLPMGSDAGARVVKVDGNDGKIIRDFNDPDATYISFVTSAAEF-DGNLYLASLQSNFIGILPLD 342 (351)
Q Consensus 280 ~~~~~~~~~~~v~~~~~~~g~~~~~~~~~~g~~~~~~~~~~~~-~g~L~ig~~~~~~i~~~~~~ 342 (351)
.+.|.++++ +++.. .+..+.. ...+.++..+ +|+||+++...++|.+++..
T Consensus 203 --------~~~i~~~~~-~g~~~-~~~~~~~--~~~~~~i~~~~~g~l~v~~~~~~~i~~~d~~ 254 (299)
T 2z2n_A 203 --------GNKIGRITT-SGEIT-EFKIPTP--NARPHAITAGAGIDLWFTEWGANKIGRLTSN 254 (299)
T ss_dssp --------TTEEEEECT-TCCEE-EEECSST--TCCEEEEEECSTTCEEEEETTTTEEEEEETT
T ss_pred --------CceEEEECC-CCcEE-EEECCCC--CCCceeEEECCCCCEEEeccCCceEEEECCC
Confidence 136899999 88854 3544322 3456777765 68999999878999999874
No 14
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=99.84 E-value=5.5e-18 Score=152.21 Aligned_cols=229 Identities=13% Similarity=0.171 Sum_probs=165.1
Q ss_pred cCCCceEEEeeCCCeEEEEEc-CCEEEEEEcCCCeEEEEee--cCCccccceEEcCCCCEEEEeCC-CCeEEEcCCC-eE
Q 018705 51 VNHPEDVSVVVSKGALYTATR-DGWVKYFILHNETLVNWKH--IDSQSLLGLTTTKDGGVILCDNE-KGLLKVTEEG-VE 125 (351)
Q Consensus 51 ~~~pe~i~~d~~~g~lyv~~~-~g~I~~~d~~~g~~~~~~~--~~~~p~~gl~~d~~G~L~v~d~~-~gl~~~~~~g-~~ 125 (351)
...|.++++| .+|.+|++.. +++|++++++ ++++.+.. ....|. ++++|++|+||+++.. .+++++++++ ..
T Consensus 56 ~~~~~~i~~~-~~g~l~v~~~~~~~i~~~~~~-g~~~~~~~~~~~~~~~-~i~~~~~g~l~v~~~~~~~i~~~d~~g~~~ 132 (299)
T 2z2n_A 56 DAKVMCLTIS-SDGEVWFTENAANKIGRITKK-GIIKEYTLPNPDSAPY-GITEGPNGDIWFTEMNGNRIGRITDDGKIR 132 (299)
T ss_dssp TCCEEEEEEC-TTSCEEEEETTTTEEEEECTT-SCEEEEECSSTTCCEE-EEEECTTSCEEEEETTTTEEEEECTTCCEE
T ss_pred cCceeeEEEC-CCCCEEEeCCCCCeEEEECCC-CcEEEEeCCCcCCCce-eeEECCCCCEEEEecCCceEEEECCCCCEE
Confidence 3578999999 5778888876 6889999984 76666543 345788 9999999999999864 5688888876 54
Q ss_pred EecC--CCCCcccEEEccCCcEEEEeCCCccCCcccccccccccCCceEEEEeCCCCeEEEe--ecCccccceEEEcCCC
Q 018705 126 AIVP--DASFTNDVIAASDGTLYFTVASTKYTPTDFYKDMAEGKPYGQLRKYDPKLKETTVL--HEGFYFANGIALSKNE 201 (351)
Q Consensus 126 ~l~~--~~~~~n~l~~d~dG~ly~t~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~~~~~~~--~~~~~~~ngi~~~~dg 201 (351)
.+.. ....|++++++++|++|+++.. .+.|+++|+ +++...+ ......|++|+++++|
T Consensus 133 ~~~~~~~~~~~~~i~~~~~g~l~v~~~~-----------------~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~~~~g 194 (299)
T 2z2n_A 133 EYELPNKGSYPSFITLGSDNALWFTENQ-----------------NNAIGRITE-SGDITEFKIPTPASGPVGITKGNDD 194 (299)
T ss_dssp EEECSSTTCCEEEEEECTTSCEEEEETT-----------------TTEEEEECT-TCCEEEEECSSTTCCEEEEEECTTS
T ss_pred EecCCCCCCCCceEEEcCCCCEEEEeCC-----------------CCEEEEEcC-CCcEEEeeCCCCCCcceeEEECCCC
Confidence 4432 2367999999999999998864 368999999 6776654 2345678999999999
Q ss_pred CEEEEEecce-eEEeecCCCCceeEEecc-CCCCCCceEECCCCCEEEEEecCCchhhhhhhcChhHHHHHHhccchhhc
Q 018705 202 DFVVVCESWK-RYWLKGDRAGILDAFIEN-LPGGPDNINLAPDGSFWIGLIKMNQTGVRAIQKCREKWELLDAYPGLISL 279 (351)
Q Consensus 202 ~~lyv~~~~~-~~~i~~~~~~~~~~~~~~-~~g~pd~i~~d~~G~lwva~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 279 (351)
+ +|+++... .+..-+. .++...+... ....|.++++|++|++|++...
T Consensus 195 ~-l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~---------------------------- 244 (299)
T 2z2n_A 195 A-LWFVEIIGNKIGRITT-SGEITEFKIPTPNARPHAITAGAGIDLWFTEWG---------------------------- 244 (299)
T ss_dssp S-EEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECSTTCEEEEETT----------------------------
T ss_pred C-EEEEccCCceEEEECC-CCcEEEEECCCCCCCceeEEECCCCCEEEeccC----------------------------
Confidence 8 99988644 3333333 3444333211 1235788999999999999743
Q ss_pred ccCCCCCCceEEEEEECCCCeEEEEEECCCCCcccceeEEEEECCEEEEEecCCCeEEEEeCCC
Q 018705 280 LLPMGSDAGARVVKVDGNDGKIIRDFNDPDATYISFVTSAAEFDGNLYLASLQSNFIGILPLDG 343 (351)
Q Consensus 280 ~~~~~~~~~~~v~~~~~~~g~~~~~~~~~~g~~~~~~~~~~~~~g~L~ig~~~~~~i~~~~~~~ 343 (351)
.++|.++|+ +|+. ..+..+.+ ...+.++...+|+||+++. .+++.+++..+
T Consensus 245 --------~~~i~~~d~-~g~~-~~~~~~~~--~~~~~~i~~~~g~l~v~~~-~~~l~~~~~~~ 295 (299)
T 2z2n_A 245 --------ANKIGRLTS-NNII-EEYPIQIK--SAEPHGICFDGETIWFAME-CDKIGKLTLIK 295 (299)
T ss_dssp --------TTEEEEEET-TTEE-EEEECSSS--SCCEEEEEECSSCEEEEET-TTEEEEEEEC-
T ss_pred --------CceEEEECC-CCce-EEEeCCCC--CCccceEEecCCCEEEEec-CCcEEEEEcCc
Confidence 136999999 8864 45544432 2345655557789999987 68999998765
No 15
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=99.83 E-value=2.2e-18 Score=164.93 Aligned_cols=237 Identities=12% Similarity=0.100 Sum_probs=170.2
Q ss_pred CcCCCceEEEee-CCCeEEEEEcCCEEEEEEcCCCeEEEEeecCCccccceEEcCCCC-EEEEeCCC-----CeEEEcCC
Q 018705 50 CVNHPEDVSVVV-SKGALYTATRDGWVKYFILHNETLVNWKHIDSQSLLGLTTTKDGG-VILCDNEK-----GLLKVTEE 122 (351)
Q Consensus 50 ~~~~pe~i~~d~-~~g~lyv~~~~g~I~~~d~~~g~~~~~~~~~~~p~~gl~~d~~G~-L~v~d~~~-----gl~~~~~~ 122 (351)
++..|.++++|| +++.||+....++|.++|+++++++.+......|. +|++|++|+ ||+++... .++.++++
T Consensus 135 ~~~~P~~lavdp~~~g~Lyv~d~~~~I~~id~~~~~v~~~~~~~~~P~-~ia~d~~G~~lyvad~~~~~~~~~v~~~~~~ 213 (430)
T 3tc9_A 135 GFGGAVWLSFDPKNHNHLYLVGEQHPTRLIDFEKEYVSTVYSGLSKVR-TICWTHEADSMIITNDQNNNDRPNNYILTRE 213 (430)
T ss_dssp CCSCCCEEEEETTEEEEEEEEEBTEEEEEEETTTTEEEEEECCCSCEE-EEEECTTSSEEEEEECCSCTTSEEEEEEEGG
T ss_pred CCCCCCEEEECCCCCCeEEEEeCCCcEEEEECCCCEEEEEecCCCCcc-eEEEeCCCCEEEEEeCCCCcccceEEEEeCC
Confidence 477999999997 47899998777899999997778877766667899 999999998 99999743 34555555
Q ss_pred C-e---EEecCCCCCcccEEEcc-CCcEEEEeCCCccCCcccccccccccCCceEEEEeCCCCeEEEee--cCccccceE
Q 018705 123 G-V---EAIVPDASFTNDVIAAS-DGTLYFTVASTKYTPTDFYKDMAEGKPYGQLRKYDPKLKETTVLH--EGFYFANGI 195 (351)
Q Consensus 123 g-~---~~l~~~~~~~n~l~~d~-dG~ly~t~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~~~~~~~~--~~~~~~ngi 195 (351)
| . ..+.. ...|+++++++ +|.||+++.. .++|++|++++++...+. .....|+||
T Consensus 214 g~~~~~~~l~~-~~~p~giavdp~~g~lyv~d~~-----------------~~~V~~~~~~~~~~~~~~~~~~~~~P~gi 275 (430)
T 3tc9_A 214 SGFKVITELTK-GQNCNGAETHPINGELYFNSWN-----------------AGQVFRYDFTTQETTPLFTIQDSGWEFHI 275 (430)
T ss_dssp GTSCSEEEEEE-CSSCCCEEECTTTCCEEEEETT-----------------TTEEEEEETTTTEEEEEEECSSSSCCEEE
T ss_pred Cceeeeeeecc-CCCceEEEEeCCCCEEEEEECC-----------------CCEEEEEECCCCcEEEEEEcCCCCcceeE
Confidence 5 2 33332 37899999999 8999999975 468999999877663332 234579999
Q ss_pred EEcCCCCEEEEEecce-eEEe---ecC--CCCceeEEecc--CC------------CCCC-ceEE--------CCCCCEE
Q 018705 196 ALSKNEDFVVVCESWK-RYWL---KGD--RAGILDAFIEN--LP------------GGPD-NINL--------APDGSFW 246 (351)
Q Consensus 196 ~~~~dg~~lyv~~~~~-~~~i---~~~--~~~~~~~~~~~--~~------------g~pd-~i~~--------d~~G~lw 246 (351)
+++++|++||+++..+ +++. .+. .......++.. .. ..|. ++++ |++|+||
T Consensus 276 a~~pdG~~lyv~d~~~~~I~~~~~d~~~~~~~~~~~~ag~~g~~g~~dg~~~~a~~~~P~~gv~v~~~~y~~~D~~g~ly 355 (430)
T 3tc9_A 276 QFHPSGNYAYIVVVNQHYILRSDYDWKTKRLTTPYIVCGQQGAKDWVDGVGKKARMHAPRQGTFVKNPAYKGSSDEYDFY 355 (430)
T ss_dssp EECTTSSEEEEEETTTTEEEEEEEETTTTEECCCEEEEECTTCBCCBCEEGGGCBBSSEEEEEEEECGGGTTSSCCEEEE
T ss_pred EEcCCCCEEEEEECCCCEEEEEeCCcccccccceEEEeccCCCCCCCCCCCcceEeCCCcceEEEccccccccCCCCeEE
Confidence 9999999999999876 4333 321 01111222211 11 1355 6776 5679999
Q ss_pred EEEecCCchhhhhhhcChhHHHHHHhccchhhcccCCCCCCceEEEEEECCCCeEEEEEECC--------CC-----Ccc
Q 018705 247 IGLIKMNQTGVRAIQKCREKWELLDAYPGLISLLLPMGSDAGARVVKVDGNDGKIIRDFNDP--------DA-----TYI 313 (351)
Q Consensus 247 va~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~g~~~~~~~~~--------~g-----~~~ 313 (351)
++... ...|.+|++ +|++....... +| ..+
T Consensus 356 vaD~~------------------------------------n~~I~~i~~-~G~v~~~~g~g~~~~~G~~dG~~~~~~~~ 398 (430)
T 3tc9_A 356 FCDRE------------------------------------NHCIRILTP-QGRVTTFAGRGSNGTSGYNDGDLRQEARF 398 (430)
T ss_dssp EEEGG------------------------------------GTEEEEECT-TSEEEEEEECCTTSSSSCBCEETTTTCBC
T ss_pred EEECC------------------------------------CcEEEEECC-CCcEEEEEeCCCCCCCcccCCCchhhcEe
Confidence 99753 136889999 99866555321 11 114
Q ss_pred cceeEEEEE--CCEEEEEecCCCeEEEEeCC
Q 018705 314 SFVTSAAEF--DGNLYLASLQSNFIGILPLD 342 (351)
Q Consensus 314 ~~~~~~~~~--~g~L~ig~~~~~~i~~~~~~ 342 (351)
..+..++.+ +|.||++...+.+|.++++.
T Consensus 399 ~~P~giavd~~~g~lyVaD~~n~rIr~i~~e 429 (430)
T 3tc9_A 399 NHPEGIVYDEERECFFIGDRENRRIRKIGYE 429 (430)
T ss_dssp SSEEEEEEETTTTEEEEEEGGGTEEEEEEEC
T ss_pred CCCcEEEEECCCCEEEEEECCCCeEEEEccC
Confidence 467788876 58999999999999998753
No 16
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=99.83 E-value=1.5e-17 Score=149.45 Aligned_cols=229 Identities=14% Similarity=0.224 Sum_probs=167.9
Q ss_pred cCCCceEEEeeCCCeEEEEEc-CCEEEEEEcCCCeEEEEeec--CCccccceEEcCCCCEEEEeCC-CCeEEEcCCC-eE
Q 018705 51 VNHPEDVSVVVSKGALYTATR-DGWVKYFILHNETLVNWKHI--DSQSLLGLTTTKDGGVILCDNE-KGLLKVTEEG-VE 125 (351)
Q Consensus 51 ~~~pe~i~~d~~~g~lyv~~~-~g~I~~~d~~~g~~~~~~~~--~~~p~~gl~~d~~G~L~v~d~~-~gl~~~~~~g-~~ 125 (351)
...|.++++| .+|.+|++.. +++|.++++. +++..+... ...|. ++++|++|++|+++.. .++++++++| .+
T Consensus 19 ~~~p~~i~~d-~~g~l~v~~~~~~~v~~~~~~-~~~~~~~~~~~~~~~~-~i~~~~~g~l~v~~~~~~~v~~~d~~g~~~ 95 (300)
T 2qc5_A 19 DSGPYGITSS-EDGKVWFTQHKANKISSLDQS-GRIKEFEVPTPDAKVM-CLIVSSLGDIWFTENGANKIGKLSKKGGFT 95 (300)
T ss_dssp TCCEEEEEEC-TTSCEEEEETTTTEEEEECTT-SCEEEEECSSTTCCEE-EEEECTTSCEEEEETTTTEEEEECTTSCEE
T ss_pred CCCcceeeEC-CCCCEEEEcCCCCeEEEECCC-CceEEEECCCCCCcce-eEEECCCCCEEEEecCCCeEEEECCCCCeE
Confidence 5789999999 5788998874 7899999986 777665432 25688 9999999999999975 4588888767 55
Q ss_pred EecC--CCCCcccEEEccCCcEEEEeCCCccCCcccccccccccCCceEEEEeCCCCeEEEee--cCccccceEEEcCCC
Q 018705 126 AIVP--DASFTNDVIAASDGTLYFTVASTKYTPTDFYKDMAEGKPYGQLRKYDPKLKETTVLH--EGFYFANGIALSKNE 201 (351)
Q Consensus 126 ~l~~--~~~~~n~l~~d~dG~ly~t~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~~~~~~~~--~~~~~~ngi~~~~dg 201 (351)
.+.. ....|++++++++|++|+++.. .+.|+++|++ ++...+. .....|++++++++|
T Consensus 96 ~~~~~~~~~~~~~i~~~~~g~l~v~~~~-----------------~~~i~~~~~~-g~~~~~~~~~~~~~~~~i~~d~~g 157 (300)
T 2qc5_A 96 EYPLPQPDSGPYGITEGLNGDIWFTQLN-----------------GDRIGKLTAD-GTIYEYDLPNKGSYPAFITLGSDN 157 (300)
T ss_dssp EEECSSTTCCEEEEEECSTTCEEEEETT-----------------TTEEEEECTT-SCEEEEECSSTTCCEEEEEECTTS
T ss_pred EecCCCCCCCCccceECCCCCEEEEccC-----------------CCeEEEECCC-CCEEEccCCCCCCCceeEEECCCC
Confidence 4432 2267999999999999999864 3589999998 6665432 235689999999999
Q ss_pred CEEEEEecce-eEEeecCCCCceeEEec-cCCCCCCceEECCCCCEEEEEecCCchhhhhhhcChhHHHHHHhccchhhc
Q 018705 202 DFVVVCESWK-RYWLKGDRAGILDAFIE-NLPGGPDNINLAPDGSFWIGLIKMNQTGVRAIQKCREKWELLDAYPGLISL 279 (351)
Q Consensus 202 ~~lyv~~~~~-~~~i~~~~~~~~~~~~~-~~~g~pd~i~~d~~G~lwva~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 279 (351)
+ +|+++... .++.-+. .++...+.. .....|.++++|++|++|++...
T Consensus 158 ~-l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~---------------------------- 207 (300)
T 2qc5_A 158 A-LWFTENQNNSIGRITN-TGKLEEYPLPTNAAAPVGITSGNDGALWFVEIM---------------------------- 207 (300)
T ss_dssp S-EEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECTTSSEEEEETT----------------------------
T ss_pred C-EEEEecCCCeEEEECC-CCcEEEeeCCCCCCCcceEEECCCCCEEEEccC----------------------------
Confidence 8 99998754 4433333 334333321 11235788999999999999753
Q ss_pred ccCCCCCCceEEEEEECCCCeEEEEEECCCCCcccceeEEEEE-CCEEEEEecCCCeEEEEeCC
Q 018705 280 LLPMGSDAGARVVKVDGNDGKIIRDFNDPDATYISFVTSAAEF-DGNLYLASLQSNFIGILPLD 342 (351)
Q Consensus 280 ~~~~~~~~~~~v~~~~~~~g~~~~~~~~~~g~~~~~~~~~~~~-~g~L~ig~~~~~~i~~~~~~ 342 (351)
.+.|.++++ +|+... +..+.+ ...+.+++.+ +|+||+++...++|.+++..
T Consensus 208 --------~~~i~~~~~-~g~~~~-~~~~~~--~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~~ 259 (300)
T 2qc5_A 208 --------GNKIGRITT-TGEISE-YDIPTP--NARPHAITAGKNSEIWFTEWGANQIGRITND 259 (300)
T ss_dssp --------TTEEEEECT-TCCEEE-EECSST--TCCEEEEEECSTTCEEEEETTTTEEEEECTT
T ss_pred --------CCEEEEEcC-CCcEEE-EECCCC--CCCceEEEECCCCCEEEeccCCCeEEEECCC
Confidence 136899999 888654 333322 3356677765 68899999888999999864
No 17
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=99.83 E-value=6e-18 Score=152.07 Aligned_cols=227 Identities=15% Similarity=0.176 Sum_probs=164.6
Q ss_pred cCCCceEEEeeCCCeEEEEEc-CCEEEEEEcCCCeEEEEee--cCCccccceEEcCCCCEEEEeCC-CCeEEEcCCC-eE
Q 018705 51 VNHPEDVSVVVSKGALYTATR-DGWVKYFILHNETLVNWKH--IDSQSLLGLTTTKDGGVILCDNE-KGLLKVTEEG-VE 125 (351)
Q Consensus 51 ~~~pe~i~~d~~~g~lyv~~~-~g~I~~~d~~~g~~~~~~~--~~~~p~~gl~~d~~G~L~v~d~~-~gl~~~~~~g-~~ 125 (351)
...|.++++| .++.+|++.. +++|+++|++ ++.+.+.. ....|. ++++|++|++|+++.. .++++++++| ..
T Consensus 61 ~~~~~~i~~~-~~g~l~v~~~~~~~v~~~d~~-g~~~~~~~~~~~~~~~-~i~~~~~g~l~v~~~~~~~i~~~~~~g~~~ 137 (300)
T 2qc5_A 61 DAKVMCLIVS-SLGDIWFTENGANKIGKLSKK-GGFTEYPLPQPDSGPY-GITEGLNGDIWFTQLNGDRIGKLTADGTIY 137 (300)
T ss_dssp TCCEEEEEEC-TTSCEEEEETTTTEEEEECTT-SCEEEEECSSTTCCEE-EEEECSTTCEEEEETTTTEEEEECTTSCEE
T ss_pred CCcceeEEEC-CCCCEEEEecCCCeEEEECCC-CCeEEecCCCCCCCCc-cceECCCCCEEEEccCCCeEEEECCCCCEE
Confidence 4679999999 6778888876 6889999986 77765543 235688 9999999999999874 5688888767 55
Q ss_pred EecC--CCCCcccEEEccCCcEEEEeCCCccCCcccccccccccCCceEEEEeCCCCeEEEee--cCccccceEEEcCCC
Q 018705 126 AIVP--DASFTNDVIAASDGTLYFTVASTKYTPTDFYKDMAEGKPYGQLRKYDPKLKETTVLH--EGFYFANGIALSKNE 201 (351)
Q Consensus 126 ~l~~--~~~~~n~l~~d~dG~ly~t~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~~~~~~~~--~~~~~~ngi~~~~dg 201 (351)
.+.. ....|++++++++|++|+++.. .++|++||+ +++...+. .....|.+|+++++|
T Consensus 138 ~~~~~~~~~~~~~i~~d~~g~l~v~~~~-----------------~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~d~~g 199 (300)
T 2qc5_A 138 EYDLPNKGSYPAFITLGSDNALWFTENQ-----------------NNSIGRITN-TGKLEEYPLPTNAAAPVGITSGNDG 199 (300)
T ss_dssp EEECSSTTCCEEEEEECTTSSEEEEETT-----------------TTEEEEECT-TCCEEEEECSSTTCCEEEEEECTTS
T ss_pred EccCCCCCCCceeEEECCCCCEEEEecC-----------------CCeEEEECC-CCcEEEeeCCCCCCCcceEEECCCC
Confidence 4422 2368999999999999999864 358999998 46665443 335679999999999
Q ss_pred CEEEEEecce-eEEeecCCCCceeEEe-ccCCCCCCceEECCCCCEEEEEecCCchhhhhhhcChhHHHHHHhccchhhc
Q 018705 202 DFVVVCESWK-RYWLKGDRAGILDAFI-ENLPGGPDNINLAPDGSFWIGLIKMNQTGVRAIQKCREKWELLDAYPGLISL 279 (351)
Q Consensus 202 ~~lyv~~~~~-~~~i~~~~~~~~~~~~-~~~~g~pd~i~~d~~G~lwva~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 279 (351)
+ +|+++... ++..-+. .++...+. ......|.++++|++|+||++...
T Consensus 200 ~-l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~---------------------------- 249 (300)
T 2qc5_A 200 A-LWFVEIMGNKIGRITT-TGEISEYDIPTPNARPHAITAGKNSEIWFTEWG---------------------------- 249 (300)
T ss_dssp S-EEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECSTTCEEEEETT----------------------------
T ss_pred C-EEEEccCCCEEEEEcC-CCcEEEEECCCCCCCceEEEECCCCCEEEeccC----------------------------
Confidence 7 99998654 4443333 33333332 111235788999999999999743
Q ss_pred ccCCCCCCceEEEEEECCCCeEEEEEECCCCCcccceeEEEEE-CCEEEEEecCCCeEEEEeCC
Q 018705 280 LLPMGSDAGARVVKVDGNDGKIIRDFNDPDATYISFVTSAAEF-DGNLYLASLQSNFIGILPLD 342 (351)
Q Consensus 280 ~~~~~~~~~~~v~~~~~~~g~~~~~~~~~~g~~~~~~~~~~~~-~g~L~ig~~~~~~i~~~~~~ 342 (351)
.+.|.++++ +|+.. .+..+.+ ...+.++..+ +|+||+++. + +|.+++..
T Consensus 250 --------~~~i~~~~~-~g~~~-~~~~~~~--~~~~~~i~~~~~g~l~v~~~-~-~i~~~~p~ 299 (300)
T 2qc5_A 250 --------ANQIGRITN-DNTIQ-EYQLQTE--NAEPHGITFGKDGSVWFALK-C-KIGKLNLN 299 (300)
T ss_dssp --------TTEEEEECT-TSCEE-EEECCST--TCCCCCEEECTTSCEEEECS-S-EEEEEEEC
T ss_pred --------CCeEEEECC-CCcEE-EEECCcc--CCccceeEeCCCCCEEEEcc-C-ceEEeCCC
Confidence 136999999 88754 5544432 2345666665 689999998 6 99999854
No 18
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=99.79 E-value=3.3e-16 Score=148.84 Aligned_cols=233 Identities=15% Similarity=0.141 Sum_probs=163.7
Q ss_pred CcCCCceEEEeeCCCeEEEEEc-CCEEEEEEcCCCeEEEEeecCCccccceEEcCCCC-EEEEeCCC--CeEEEcC-CC-
Q 018705 50 CVNHPEDVSVVVSKGALYTATR-DGWVKYFILHNETLVNWKHIDSQSLLGLTTTKDGG-VILCDNEK--GLLKVTE-EG- 123 (351)
Q Consensus 50 ~~~~pe~i~~d~~~g~lyv~~~-~g~I~~~d~~~g~~~~~~~~~~~p~~gl~~d~~G~-L~v~d~~~--gl~~~~~-~g- 123 (351)
++..|.+|++| .++.||+... +++|.++|++++++..+......|. ++++++|+ ||+++... .++++++ .+
T Consensus 129 ~~~~P~~la~d-~~g~lyv~d~~~~~I~~id~~~g~~~~~~~~~~~~~--ia~~~~g~~l~~~d~~~~~~I~~~d~~~~~ 205 (409)
T 3hrp_A 129 KFKYMWGIAAV-GNNTVLAYQRDDPRVRLISVDDNKVTTVHPGFKGGK--PAVTKDKQRVYSIGWEGTHTVYVYMKASGW 205 (409)
T ss_dssp CCCCEEEEEEC-STTEEEEEETTTTEEEEEETTTTEEEEEEETCCBCB--CEECTTSSEEEEEBSSTTCEEEEEEGGGTT
T ss_pred ccCCceEEEEe-CCCCEEEEecCCCcEEEEECCCCEEEEeeccCCCCc--eeEecCCCcEEEEecCCCceEEEEEcCCCc
Confidence 47789999999 5677887654 6899999998888877765544454 89999985 78888754 6888886 33
Q ss_pred e-EEe----cCCCCCcccEEEcc-CCcEEEEeCCCccCCcccccccccccCCceEEEEeCCCCeEEEe----ecCcc--c
Q 018705 124 V-EAI----VPDASFTNDVIAAS-DGTLYFTVASTKYTPTDFYKDMAEGKPYGQLRKYDPKLKETTVL----HEGFY--F 191 (351)
Q Consensus 124 ~-~~l----~~~~~~~n~l~~d~-dG~ly~t~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~~~~~~~----~~~~~--~ 191 (351)
. ..+ ......|+++++++ +|.||+++. .++|++||++++....+ ..+.. .
T Consensus 206 ~~~~~g~~~~~~~~~p~~iav~p~~g~lyv~d~------------------~~~I~~~d~~~~~~~~~~~~~~~g~~~~~ 267 (409)
T 3hrp_A 206 APTRIGQLGSTFSGKIGAVALDETEEWLYFVDS------------------NKNFGRFNVKTQEVTLIKQLELSGSLGTN 267 (409)
T ss_dssp CEEEEEECCTTSCSCCCBCEECTTSSEEEEECT------------------TCEEEEEETTTCCEEEEEECCCCSCCCCS
T ss_pred eeEEeeeccchhcCCcEEEEEeCCCCeEEEEEC------------------CCcEEEEECCCCCEEEEecccccCCCCCC
Confidence 3 344 21337899999999 789999664 35899999987776555 22222 2
Q ss_pred cc-eEEEcCCCCEEEEEecce-eEEeecCCCCceeEEeccC--------------CCCCCceEECCCCCEEEEEe-cCCc
Q 018705 192 AN-GIALSKNEDFVVVCESWK-RYWLKGDRAGILDAFIENL--------------PGGPDNINLAPDGSFWIGLI-KMNQ 254 (351)
Q Consensus 192 ~n-gi~~~~dg~~lyv~~~~~-~~~i~~~~~~~~~~~~~~~--------------~g~pd~i~~d~~G~lwva~~-~~~~ 254 (351)
|. +|+++|++..||+++..+ +++.-+.. +....+.... -..|.++++|++|+||++.. .
T Consensus 268 P~~~ia~~p~~g~lyv~d~~~~~I~~~~~~-g~~~~~~g~~~~~g~~dg~~~~~~~~~P~gia~d~dG~lyvad~~~--- 343 (409)
T 3hrp_A 268 PGPYLIYYFVDSNFYMSDQNLSSVYKITPD-GECEWFCGSATQKTVQDGLREEALFAQPNGMTVDEDGNFYIVDGFK--- 343 (409)
T ss_dssp SCCEEEEETTTTEEEEEETTTTEEEEECTT-CCEEEEEECTTCCSCBCEEGGGCBCSSEEEEEECTTCCEEEEETTT---
T ss_pred ccccEEEeCCCCEEEEEeCCCCEEEEEecC-CCEEEEEeCCCCCCcCCCcccccEeCCCeEEEEeCCCCEEEEeCCC---
Confidence 44 999999766799999876 55443321 2233333211 12488999999999999975 3
Q ss_pred hhhhhhhcChhHHHHHHhccchhhcccCCCCCCceEEEEEE-CCCCeEEEEEECC------CC----CcccceeEEEEE-
Q 018705 255 TGVRAIQKCREKWELLDAYPGLISLLLPMGSDAGARVVKVD-GNDGKIIRDFNDP------DA----TYISFVTSAAEF- 322 (351)
Q Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~-~~~g~~~~~~~~~------~g----~~~~~~~~~~~~- 322 (351)
...|.+++ + +|++......+ +| ..+..+.+++.+
T Consensus 344 ---------------------------------~~~I~~~~~~-~G~v~~~~g~~~~~g~~~g~~~~~~~~~P~giavd~ 389 (409)
T 3hrp_A 344 ---------------------------------GYCLRKLDIL-DGYVSTVAGQVDVASQIDGTPLEATFNYPYDICYDG 389 (409)
T ss_dssp ---------------------------------TCEEEEEETT-TTEEEEEEECTTCBSCCCBSTTTCCBSSEEEEEECS
T ss_pred ---------------------------------CCEEEEEECC-CCEEEEEeCCCCCCCcCCCChhceEeCCceEEEEcC
Confidence 24689999 6 88865443321 11 113457777765
Q ss_pred CCEEEEEecCCCeEEEEeC
Q 018705 323 DGNLYLASLQSNFIGILPL 341 (351)
Q Consensus 323 ~g~L~ig~~~~~~i~~~~~ 341 (351)
+|.||++...+.+|.++.+
T Consensus 390 ~g~lyVad~~n~~Ir~i~~ 408 (409)
T 3hrp_A 390 EGGYWIAEAWGKAIRKYAV 408 (409)
T ss_dssp SSEEEEEESTTCEEEEEEE
T ss_pred CCCEEEEECCCCeEEEEEe
Confidence 4999999999999999875
No 19
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=99.79 E-value=3.5e-17 Score=151.69 Aligned_cols=235 Identities=17% Similarity=0.206 Sum_probs=156.9
Q ss_pred CceEecCCCcCCCceEEEeeCCCeEEEEEc---CC--EEEEEEcCCCeEEEEee-------cCCccccceEEcCCCCEEE
Q 018705 42 GLTKLGEGCVNHPEDVSVVVSKGALYTATR---DG--WVKYFILHNETLVNWKH-------IDSQSLLGLTTTKDGGVIL 109 (351)
Q Consensus 42 ~~~~i~~~~~~~pe~i~~d~~~g~lyv~~~---~g--~I~~~d~~~g~~~~~~~-------~~~~p~~gl~~d~~G~L~v 109 (351)
.++.+.... ..|++|+++ .+|++|++.. ++ +|+.++ ++++..+.. ....|+ ++++|++|+||+
T Consensus 8 ~~~~v~~~~-~~p~~va~~-~~g~~~v~~~~~~~~~~~l~~~~--~g~~~~~p~~~~~~~~~~~~p~-gv~~d~~g~L~v 82 (343)
T 2qe8_A 8 RLEVVAELS-LAPGNITLT-PDGRLFLSLHQFYQPEMQVAELT--QDGLIPFPPQSGNAIITFDTVL-GIKSDGNGIVWM 82 (343)
T ss_dssp CCEEEEEES-SCEEEEEEC-TTSCEEEEECGGGCCSCSEEEEE--TTEEEESCCCCSSCCCCCSCEE-EEEECSSSEEEE
T ss_pred eeEEEEEcC-CCcceEEEC-CCCCEEEEeCCCCCCceEEEEEC--CCCeecCCCcccCcccceeEee-EEEEcCCCcEEE
Confidence 445565543 589999999 5778888753 34 799998 677665421 124689 999999999999
Q ss_pred EeCC------CCeEEEcC-CC--eEEecCC------CCCcccEEEccC-CcEEEEeCCCccCCcccccccccccCCceEE
Q 018705 110 CDNE------KGLLKVTE-EG--VEAIVPD------ASFTNDVIAASD-GTLYFTVASTKYTPTDFYKDMAEGKPYGQLR 173 (351)
Q Consensus 110 ~d~~------~gl~~~~~-~g--~~~l~~~------~~~~n~l~~d~d-G~ly~t~~~~~~~~~~~~~~~~~~~~~g~l~ 173 (351)
+|.+ ..+++++. +| .+.+... ..+++++++|++ |.+|+++.+.. ..+.|+
T Consensus 83 ~D~g~~~~~~~~i~~~d~~tg~~~~~~~~~~~~~~~~~~~~~v~vd~~~g~~yvtd~~~~--------------~~~~i~ 148 (343)
T 2qe8_A 83 LDNGNQSKSVPKLVAWDTLNNQLSRVIYLPPPITLSNSFVNDLAVDLIHNFVYISDPAPD--------------DKAALI 148 (343)
T ss_dssp EECHHHHTSCCEEEEEETTTTEEEEEEECCTTTSCTTCCCCEEEEETTTTEEEEEECCSG--------------GGCEEE
T ss_pred EcCCCCcCCCCeEEEEECCCCeEEEEEECChhhcccccccceEEEecCCCEEEEEcCccC--------------CCCeEE
Confidence 9965 57888885 56 3444321 157899999975 78999997311 134677
Q ss_pred EEeCCCCeEEEeecC------------------------------ccccceEEEcCCCCEEEEEecce-eEE-eec----
Q 018705 174 KYDPKLKETTVLHEG------------------------------FYFANGIALSKNEDFVVVCESWK-RYW-LKG---- 217 (351)
Q Consensus 174 ~~d~~~~~~~~~~~~------------------------------~~~~ngi~~~~dg~~lyv~~~~~-~~~-i~~---- 217 (351)
+||+++++...+..+ ...+|||++++||+.||+++... +++ +..
T Consensus 149 v~d~~~g~~~r~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~~~gia~s~dg~~ly~~~~~~~~l~~~~~~~~~ 228 (343)
T 2qe8_A 149 RVDLQTGLAARVLQGYPGIAPEDIDLVIDGVPVQIGQPDGTVIRPHLGVNGIVLDAENEWLYLSPMHSTSMYRIKSADLS 228 (343)
T ss_dssp EEETTTCCEEEECTTCTTTSCCSCCCEETTEECBEECTTSCEECCCCCEEEEEECTTSCEEEEEESSCSEEEEEEHHHHT
T ss_pred EEECCCCCEEEEecCCCcccccccceeECCEEEEeccCCCceeceecccceeEeccCCCEEEEEeCCCCeEEEEEHHHhc
Confidence 777766655443211 02479999999999999998766 433 321
Q ss_pred -CCCCceeEE----eccCCCCCCceEECCCCCEEEEEecCCchhhhhhhcChhHHHHHHhccchhhcccCCCCCCceEEE
Q 018705 218 -DRAGILDAF----IENLPGGPDNINLAPDGSFWIGLIKMNQTGVRAIQKCREKWELLDAYPGLISLLLPMGSDAGARVV 292 (351)
Q Consensus 218 -~~~~~~~~~----~~~~~g~pd~i~~d~~G~lwva~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 292 (351)
......+.+ .....+.|+|+++|++|++|++.... +.|.
T Consensus 229 ~~~~~~~~~~~~~~~~g~~g~pdgia~d~~G~l~va~~~~------------------------------------~~V~ 272 (343)
T 2qe8_A 229 NLQLTDAELGSKIERYSEKPICDGISIDKDHNIYVGDLAH------------------------------------SAIG 272 (343)
T ss_dssp CTTCCHHHHHTTCEEEEECCSCSCEEECTTCCEEEEEGGG------------------------------------TEEE
T ss_pred CCCCChhhhhcceEecccCCCCceEEECCCCCEEEEccCC------------------------------------CeEE
Confidence 111111110 00123479999999999999997541 3699
Q ss_pred EEECCCCeEEEEEECCCCCcccceeEEEEE-CCEEEEEecCCC
Q 018705 293 KVDGNDGKIIRDFNDPDATYISFVTSAAEF-DGNLYLASLQSN 334 (351)
Q Consensus 293 ~~~~~~g~~~~~~~~~~g~~~~~~~~~~~~-~g~L~ig~~~~~ 334 (351)
++|+++|+.......+. ...+++++.. +|+||+.+...+
T Consensus 273 ~~d~~~G~~~~~~~~~~---~~~p~~va~~~~g~l~v~~~~~~ 312 (343)
T 2qe8_A 273 VITSADRAYKLLVTDEK---LSWTDSFNFGSDGYLYFDCNQLH 312 (343)
T ss_dssp EEETTTTEEEEEEECGG---GSCEEEEEECTTSCEEEEECCGG
T ss_pred EEECCCCCEEEEEECCc---eecCCeeEECCCCcEEEEeCccc
Confidence 99985677554444432 3457777764 688999986443
No 20
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=99.78 E-value=7.6e-17 Score=148.41 Aligned_cols=245 Identities=16% Similarity=0.151 Sum_probs=161.0
Q ss_pred CcCCCceEEEeeCCCeEEEEEcCC-------------------------EEEEEEcCCCeEEEEee--cCCccccceEEc
Q 018705 50 CVNHPEDVSVVVSKGALYTATRDG-------------------------WVKYFILHNETLVNWKH--IDSQSLLGLTTT 102 (351)
Q Consensus 50 ~~~~pe~i~~d~~~g~lyv~~~~g-------------------------~I~~~d~~~g~~~~~~~--~~~~p~~gl~~d 102 (351)
++..|.+|++| .+|.+|++...+ .|+++|..+|++..... ....|. ++++|
T Consensus 22 ~l~~v~~va~d-~~G~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~p~-gia~d 99 (329)
T 3fvz_A 22 LPGQVSGVALD-SKNNLVIFHRGDHVWDGNSFDSKFVYQQRGLGPIEEDTILVIDPNNAEILQSSGKNLFYLPH-GLSID 99 (329)
T ss_dssp CCSCEEEEEEC-TTCCEEEEECTTCCCCTTSBCTTSCBSCGGGCSCCSCCEEEECTTTCCEEEEECTTTCSSEE-EEEEC
T ss_pred ecCCceEEEEC-CCCCEEEEeCCCCeEEeeccCcceeecccccccccCCcEEEEECCCCeEEeccCCCccCCce-EEEEC
Confidence 36678999999 567888876544 69999997787754332 224799 99999
Q ss_pred CCCCEEEEeCCC-CeEEEcCCC----eEEecC---------CCCCcccEEEcc-CCcEEEEeC-CCccCCcccccccccc
Q 018705 103 KDGGVILCDNEK-GLLKVTEEG----VEAIVP---------DASFTNDVIAAS-DGTLYFTVA-STKYTPTDFYKDMAEG 166 (351)
Q Consensus 103 ~~G~L~v~d~~~-gl~~~~~~g----~~~l~~---------~~~~~n~l~~d~-dG~ly~t~~-~~~~~~~~~~~~~~~~ 166 (351)
++|+||+++... .+++++++| +..+.. ....|++|++++ +|++|++++ .
T Consensus 100 ~~g~l~v~d~~~~~v~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~P~~ia~~~~~g~lyv~d~~~--------------- 164 (329)
T 3fvz_A 100 TDGNYWVTDVALHQVFKLDPHSKEGPLLILGRSMQPGSDQNHFCQPTDVAVEPSTGAVFVSDGYC--------------- 164 (329)
T ss_dssp TTSCEEEEETTTTEEEEECTTCSSCCSEEESBTTBCCCSTTCCSSEEEEEECTTTCCEEEEECSS---------------
T ss_pred CCCCEEEEECCCCEEEEEeCCCCeEEEEEecccCCCCCCccccCCCcEEEEeCCCCeEEEEeCCC---------------
Confidence 999999999865 466666655 233321 125799999999 899999996 3
Q ss_pred cCCceEEEEeCCCCeEEEee----------cCccccceEEEcCCCCEEEEEecce-eEEeecCCCCce-eEEec-cCCCC
Q 018705 167 KPYGQLRKYDPKLKETTVLH----------EGFYFANGIALSKNEDFVVVCESWK-RYWLKGDRAGIL-DAFIE-NLPGG 233 (351)
Q Consensus 167 ~~~g~l~~~d~~~~~~~~~~----------~~~~~~ngi~~~~dg~~lyv~~~~~-~~~i~~~~~~~~-~~~~~-~~~g~ 233 (351)
.++|.+|++++.....+. ..+..|+||++++++..|||++..+ ++.+-+...++. ..+.. .....
T Consensus 165 --~~~I~~~~~~g~~~~~~~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~~~~~I~~~~~~~G~~~~~~~~~~~~~~ 242 (329)
T 3fvz_A 165 --NSRIVQFSPSGKFVTQWGEESSGSSPRPGQFSVPHSLALVPHLDQLCVADRENGRIQCFKTDTKEFVREIKHASFGRN 242 (329)
T ss_dssp --CCEEEEECTTSCEEEEECEECCSSSCCTTEESCEEEEEEETTTTEEEEEETTTTEEEEEETTTCCEEEEECCTTTTTC
T ss_pred --CCeEEEEcCCCCEEEEeccCCCCCCCCCcccCCCcEEEEECCCCEEEEEECCCCEEEEEECCCCcEEEEEeccccCCC
Confidence 468999997644343332 1245699999999955699999877 555443322332 22211 11122
Q ss_pred CCceEECCCCCEEEEEecCCchhhhhhhcChhHHHHHHhccchhhcccCCCCCCceEEEEEECCCCeEEEEEECCCCCcc
Q 018705 234 PDNINLAPDGSFWIGLIKMNQTGVRAIQKCREKWELLDAYPGLISLLLPMGSDAGARVVKVDGNDGKIIRDFNDPDATYI 313 (351)
Q Consensus 234 pd~i~~d~~G~lwva~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~g~~~~~~~~~~g~~~ 313 (351)
+.++++.+ |.+++..... .. .......+..++..+|+.+..+.... ...
T Consensus 243 ~~~~~~~p-g~~~~~~g~~--~v---------------------------~~~~~~~v~~~~~~~g~~~~~~~~~~-~~~ 291 (329)
T 3fvz_A 243 VFAISYIP-GFLFAVNGKP--YF---------------------------GDQEPVQGFVMNFSSGEIIDVFKPVR-KHF 291 (329)
T ss_dssp EEEEEEET-TEEEEEECCC--CT---------------------------TCSCCCCEEEEETTTCCEEEEECCSS-SCC
T ss_pred cceeeecC-CEEEEeCCCE--Ee---------------------------ccCCCcEEEEEEcCCCeEEEEEcCCC-Ccc
Confidence 34455555 4444433210 00 01122358888965899888875322 224
Q ss_pred cceeEEEEE-CCEEEEEecCCCeEEEEeCCCC
Q 018705 314 SFVTSAAEF-DGNLYLASLQSNFIGILPLDGP 344 (351)
Q Consensus 314 ~~~~~~~~~-~g~L~ig~~~~~~i~~~~~~~~ 344 (351)
..+.+++.+ +|+||++...+++|.++++.+.
T Consensus 292 ~~p~~ia~~~dG~lyvad~~~~~I~~~~~~~~ 323 (329)
T 3fvz_A 292 DMPHDIVASEDGTVYIGDAHTNTVWKFTLTEK 323 (329)
T ss_dssp SSEEEEEECTTSEEEEEESSSCCEEEEEEEEC
T ss_pred CCeeEEEECCCCCEEEEECCCCEEEEEeCCcc
Confidence 567777765 5799999999999999997654
No 21
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=99.76 E-value=3.3e-16 Score=139.65 Aligned_cols=203 Identities=10% Similarity=0.071 Sum_probs=144.7
Q ss_pred cCCCceEEEeeCCCeEEEEE-cCCEEEEEEcCCCeEEEEeec-CCccccceEEcCC-CCEEEEeCCC-CeEEEcCCC--e
Q 018705 51 VNHPEDVSVVVSKGALYTAT-RDGWVKYFILHNETLVNWKHI-DSQSLLGLTTTKD-GGVILCDNEK-GLLKVTEEG--V 124 (351)
Q Consensus 51 ~~~pe~i~~d~~~g~lyv~~-~~g~I~~~d~~~g~~~~~~~~-~~~p~~gl~~d~~-G~L~v~d~~~-gl~~~~~~g--~ 124 (351)
...|+++++|++++.+|++. .+++|++++.+++..+.+... ...|. ++++|++ ++||+++... .+.+++.+| .
T Consensus 35 ~~~~~gi~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~p~-~ia~d~~~~~lyv~d~~~~~I~~~~~~g~~~ 113 (267)
T 1npe_A 35 AKVIIGLAFDCVDKVVYWTDISEPSIGRASLHGGEPTTIIRQDLGSPE-GIALDHLGRTIFWTDSQLDRIEVAKMDGTQR 113 (267)
T ss_dssp EEEEEEEEEETTTTEEEEEETTTTEEEEEESSSCCCEEEECTTCCCEE-EEEEETTTTEEEEEETTTTEEEEEETTSCSC
T ss_pred CCcEEEEEEecCCCEEEEEECCCCEEEEEecCCCCcEEEEECCCCCcc-EEEEEecCCeEEEEECCCCEEEEEEcCCCCE
Confidence 35689999997778888765 478999999865554444333 25799 9999985 6899999765 466666665 4
Q ss_pred EEecC-CCCCcccEEEcc-CCcEEEEeCCCccCCcccccccccccCCceEEEEeCCCCeEEEee-cCccccceEEEcCCC
Q 018705 125 EAIVP-DASFTNDVIAAS-DGTLYFTVASTKYTPTDFYKDMAEGKPYGQLRKYDPKLKETTVLH-EGFYFANGIALSKNE 201 (351)
Q Consensus 125 ~~l~~-~~~~~n~l~~d~-dG~ly~t~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~~~~~~~~-~~~~~~ngi~~~~dg 201 (351)
+.+.. ....|+++++|+ +|++|+++... ..++|+++++++...+.+. ..+..|+||++++++
T Consensus 114 ~~~~~~~~~~P~~i~vd~~~g~lyv~~~~~---------------~~~~I~~~~~dg~~~~~~~~~~~~~P~gia~d~~~ 178 (267)
T 1npe_A 114 RVLFDTGLVNPRGIVTDPVRGNLYWTDWNR---------------DNPKIETSHMDGTNRRILAQDNLGLPNGLTFDAFS 178 (267)
T ss_dssp EEEECSSCSSEEEEEEETTTTEEEEEECCS---------------SSCEEEEEETTSCCCEEEECTTCSCEEEEEEETTT
T ss_pred EEEEECCCCCccEEEEeeCCCEEEEEECCC---------------CCcEEEEEecCCCCcEEEEECCCCCCcEEEEcCCC
Confidence 44433 337899999999 57899998641 1357999988754444443 456789999999998
Q ss_pred CEEEEEecce-eEEeecCCCCceeEEeccCCCCCCceEECCCCCEEEEEecCCchhhhhhhcChhHHHHHHhccchhhcc
Q 018705 202 DFVVVCESWK-RYWLKGDRAGILDAFIENLPGGPDNINLAPDGSFWIGLIKMNQTGVRAIQKCREKWELLDAYPGLISLL 280 (351)
Q Consensus 202 ~~lyv~~~~~-~~~i~~~~~~~~~~~~~~~~g~pd~i~~d~~G~lwva~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 280 (351)
+.||+++... ++..-+......+.+... ...|++++.| +|++|++....
T Consensus 179 ~~lyv~d~~~~~I~~~~~~g~~~~~~~~~-~~~P~gi~~d-~~~lyva~~~~---------------------------- 228 (267)
T 1npe_A 179 SQLCWVDAGTHRAECLNPAQPGRRKVLEG-LQYPFAVTSY-GKNLYYTDWKT---------------------------- 228 (267)
T ss_dssp TEEEEEETTTTEEEEEETTEEEEEEEEEC-CCSEEEEEEE-TTEEEEEETTT----------------------------
T ss_pred CEEEEEECCCCEEEEEecCCCceEEEecC-CCCceEEEEe-CCEEEEEECCC----------------------------
Confidence 8899999876 554443322233333332 3468999998 68899987531
Q ss_pred cCCCCCCceEEEEEECCCCeEEEEEEC
Q 018705 281 LPMGSDAGARVVKVDGNDGKIIRDFND 307 (351)
Q Consensus 281 ~~~~~~~~~~v~~~~~~~g~~~~~~~~ 307 (351)
+.|.++|+++|+.+..+..
T Consensus 229 --------~~v~~~d~~~g~~~~~i~~ 247 (267)
T 1npe_A 229 --------NSVIAMDLAISKEMDTFHP 247 (267)
T ss_dssp --------TEEEEEETTTTEEEEEECC
T ss_pred --------CeEEEEeCCCCCceEEEcc
Confidence 3689999956898888753
No 22
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=99.76 E-value=2.4e-16 Score=146.69 Aligned_cols=183 Identities=9% Similarity=0.057 Sum_probs=132.2
Q ss_pred cCCCceEEEeeCCCeEEEE-EcCCEEEEEEcCCCeEEEEee-cCCccccceEEcC-CCCEEEEeCCC-CeEEEcCCC--e
Q 018705 51 VNHPEDVSVVVSKGALYTA-TRDGWVKYFILHNETLVNWKH-IDSQSLLGLTTTK-DGGVILCDNEK-GLLKVTEEG--V 124 (351)
Q Consensus 51 ~~~pe~i~~d~~~g~lyv~-~~~g~I~~~d~~~g~~~~~~~-~~~~p~~gl~~d~-~G~L~v~d~~~-gl~~~~~~g--~ 124 (351)
+..|+++++|+.++.||.. ...++|++++++++..+.+.. ....|. ||++|+ .|+||+++... .+.+++.+| .
T Consensus 72 ~~~~~~l~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~~~~~~~~p~-glavd~~~g~ly~~d~~~~~I~~~~~dG~~~ 150 (349)
T 3v64_C 72 LENAIALDFHHRRELVFWSDVTLDRILRANLNGSNVEEVVSTGLESPG-GLAVDWVHDKLYWTDSGTSRIEVANLDGAHR 150 (349)
T ss_dssp CSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSCCC-EEEEETTTTEEEEEETTTTEEEEEETTSCSC
T ss_pred CCceEEEEEeccccEEEEEeccCCceEEEecCCCCceEEEeCCCCCcc-EEEEecCCCeEEEEcCCCCeEEEEcCCCCce
Confidence 6789999999777877654 567899999996665554433 235788 999996 67999999875 456666666 4
Q ss_pred EEec-CCCCCcccEEEcc-CCcEEEEeCCCccCCcccccccccccCCceEEEEeCCCCeEEEee-cCccccceEEEcCCC
Q 018705 125 EAIV-PDASFTNDVIAAS-DGTLYFTVASTKYTPTDFYKDMAEGKPYGQLRKYDPKLKETTVLH-EGFYFANGIALSKNE 201 (351)
Q Consensus 125 ~~l~-~~~~~~n~l~~d~-dG~ly~t~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~~~~~~~~-~~~~~~ngi~~~~dg 201 (351)
+.+. .....|++|++|| +|.||+++... .++|+++++++...+.+. .++..||||++++++
T Consensus 151 ~~l~~~~l~~P~~iavdp~~g~ly~td~~~----------------~~~I~r~~~dG~~~~~~~~~~~~~PnGla~d~~~ 214 (349)
T 3v64_C 151 KVLLWQSLEKPRAIALHPMEGTIYWTDWGN----------------TPRIEASSMDGSGRRIIADTHLFWPNGLTIDYAG 214 (349)
T ss_dssp EEEECTTCSCEEEEEEETTTTEEEEEECSS----------------SCEEEEEETTSCSCEESCCSSCSCEEEEEEETTT
T ss_pred EEEEeCCCCCcceEEEecCcCeEEEeccCC----------------CCEEEEEeCCCCCcEEEEECCCCCcceEEEeCCC
Confidence 4444 3347899999998 57899999751 268999998765555543 467889999999988
Q ss_pred CEEEEEecce-eEEeecCCCCceeEEeccCCCCCCceEECCCCCEEEEEec
Q 018705 202 DFVVVCESWK-RYWLKGDRAGILDAFIENLPGGPDNINLAPDGSFWIGLIK 251 (351)
Q Consensus 202 ~~lyv~~~~~-~~~i~~~~~~~~~~~~~~~~g~pd~i~~d~~G~lwva~~~ 251 (351)
+.||+++... +++..+......+.+.....+.|++++++ +|++|++...
T Consensus 215 ~~lY~aD~~~~~I~~~~~dG~~~~~~~~~~~~~P~giav~-~~~ly~td~~ 264 (349)
T 3v64_C 215 RRMYWVDAKHHVIERANLDGSHRKAVISQGLPHPFAITVF-EDSLYWTDWH 264 (349)
T ss_dssp TEEEEEETTTTEEEEEETTSCSCEEEECSSCSSEEEEEEE-TTEEEEEETT
T ss_pred CEEEEEECCCCEEEEEeCCCCceEEEEeCCCCCceEEEEE-CCEEEEecCC
Confidence 8899999877 55543322222333333223479999995 6789998653
No 23
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=99.75 E-value=4.7e-16 Score=146.65 Aligned_cols=188 Identities=10% Similarity=0.059 Sum_probs=133.9
Q ss_pred eEecCCCcCCCceEEEeeCCCeEEE-EEcCCEEEEEEcCCCeEEEEee-cCCccccceEEcC-CCCEEEEeCCCC-eEEE
Q 018705 44 TKLGEGCVNHPEDVSVVVSKGALYT-ATRDGWVKYFILHNETLVNWKH-IDSQSLLGLTTTK-DGGVILCDNEKG-LLKV 119 (351)
Q Consensus 44 ~~i~~~~~~~pe~i~~d~~~g~lyv-~~~~g~I~~~d~~~g~~~~~~~-~~~~p~~gl~~d~-~G~L~v~d~~~g-l~~~ 119 (351)
+.+..+ +..|+++++|+.++.||+ +...++|++++++++..+.+.. ....|. ||++|+ .|+||+++...+ +.++
T Consensus 109 ~~~~~~-~~~~~gl~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~~~~~~~~p~-glavd~~~g~lY~~d~~~~~I~~~ 186 (386)
T 3v65_B 109 TLLLNN-LENAIALDFHHRRELVFWSDVTLDRILRANLNGSNVEEVVSTGLESPG-GLAVDWVHDKLYWTDSGTSRIEVA 186 (386)
T ss_dssp EEEECS-CSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCCEEEEECSSCSCCC-CEEEETTTTEEEEEETTTTEEEEC
T ss_pred EEEecC-CCccEEEEEecCCCeEEEEeCCCCcEEEEecCCCCcEEEEeCCCCCcc-EEEEEeCCCeEEEEcCCCCeEEEE
Confidence 344443 678999999977787765 4567899999996665555433 335789 999996 678999998765 5555
Q ss_pred cCCC--eEEec-CCCCCcccEEEcc-CCcEEEEeCCCccCCcccccccccccCCceEEEEeCCCCeEEEe-ecCccccce
Q 018705 120 TEEG--VEAIV-PDASFTNDVIAAS-DGTLYFTVASTKYTPTDFYKDMAEGKPYGQLRKYDPKLKETTVL-HEGFYFANG 194 (351)
Q Consensus 120 ~~~g--~~~l~-~~~~~~n~l~~d~-dG~ly~t~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~~~~~~~-~~~~~~~ng 194 (351)
+.+| .+.+. .....|++|++|| +|.||+++... .++|+++++++...+.+ ..++..|||
T Consensus 187 ~~dg~~~~~l~~~~l~~P~giavdp~~g~ly~td~~~----------------~~~I~r~~~dG~~~~~~~~~~~~~PnG 250 (386)
T 3v65_B 187 NLDGAHRKVLLWQSLEKPRAIALHPMEGTIYWTDWGN----------------TPRIEASSMDGSGRRIIADTHLFWPNG 250 (386)
T ss_dssp BTTSCSCEEEECSSCSCEEEEEEETTTTEEEEEECSS----------------SCEEEEEETTSCSCEEEECSSCSCEEE
T ss_pred eCCCCceEEeecCCCCCCcEEEEEcCCCeEEEeccCC----------------CCEEEEEeCCCCCcEEEEECCCCCeee
Confidence 5566 44443 3447899999997 56899999751 26899999875544444 356788999
Q ss_pred EEEcCCCCEEEEEecce-eEEeecCCCCceeEEeccCCCCCCceEECCCCCEEEEEe
Q 018705 195 IALSKNEDFVVVCESWK-RYWLKGDRAGILDAFIENLPGGPDNINLAPDGSFWIGLI 250 (351)
Q Consensus 195 i~~~~dg~~lyv~~~~~-~~~i~~~~~~~~~~~~~~~~g~pd~i~~d~~G~lwva~~ 250 (351)
|+++++++.||++++.. +++..+......+.+.....+.|++++++ ++++|++..
T Consensus 251 lavd~~~~~lY~aD~~~~~I~~~d~dG~~~~~~~~~~~~~P~giav~-~~~ly~td~ 306 (386)
T 3v65_B 251 LTIDYAGRRMYWVDAKHHVIERANLDGSHRKAVISQGLPHPFAITVF-EDSLYWTDW 306 (386)
T ss_dssp EEEEGGGTEEEEEETTTTEEEEECTTSCSCEEEECSSCSSEEEEEEE-TTEEEEEET
T ss_pred EEEeCCCCEEEEEECCCCEEEEEeCCCCeeEEEEECCCCCceEEEEE-CCEEEEeeC
Confidence 99998888899999877 66654432223333433223479999995 568888864
No 24
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=99.74 E-value=8.4e-16 Score=141.52 Aligned_cols=211 Identities=11% Similarity=0.117 Sum_probs=146.1
Q ss_pred cCCCceEEEeeCCCeEEEEE-cCCEEEEEEcCCCeEEEEeecCC------ccccceEEcCCCCEEEEeC--CCCeEEEcC
Q 018705 51 VNHPEDVSVVVSKGALYTAT-RDGWVKYFILHNETLVNWKHIDS------QSLLGLTTTKDGGVILCDN--EKGLLKVTE 121 (351)
Q Consensus 51 ~~~pe~i~~d~~~g~lyv~~-~~g~I~~~d~~~g~~~~~~~~~~------~p~~gl~~d~~G~L~v~d~--~~gl~~~~~ 121 (351)
...|+++++++ ++.+|++. .++.|.++|+.++++......+. .|. +|++ .+++||+++. .+.+..++.
T Consensus 83 ~~~p~~i~~~~-~g~lyv~~~~~~~v~~iD~~t~~~~~~i~~g~~~~~~~~p~-~i~~-~~~~lyv~~~~~~~~v~viD~ 159 (328)
T 3dsm_A 83 FTSPRYIHFLS-DEKAYVTQIWDYRIFIINPKTYEITGYIECPDMDMESGSTE-QMVQ-YGKYVYVNCWSYQNRILKIDT 159 (328)
T ss_dssp CSSEEEEEEEE-TTEEEEEEBSCSEEEEEETTTTEEEEEEECTTCCTTTCBCC-CEEE-ETTEEEEEECTTCCEEEEEET
T ss_pred CCCCcEEEEeC-CCeEEEEECCCCeEEEEECCCCeEEEEEEcCCccccCCCcc-eEEE-ECCEEEEEcCCCCCEEEEEEC
Confidence 46799999984 56999988 78999999998888764434444 799 9999 5789999986 456777885
Q ss_pred -CC--eEEecCCCCCcccEEEccCCcEEEEeCCCccCCcccccccccccCCceEEEEeCCCCeEEEeec--CccccceEE
Q 018705 122 -EG--VEAIVPDASFTNDVIAASDGTLYFTVASTKYTPTDFYKDMAEGKPYGQLRKYDPKLKETTVLHE--GFYFANGIA 196 (351)
Q Consensus 122 -~g--~~~l~~~~~~~n~l~~d~dG~ly~t~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~~~~~~~~~--~~~~~ngi~ 196 (351)
++ ...+... ..|++++++++|++|+++... +... .+ ....+.|+++|++++++..... ....|++++
T Consensus 160 ~t~~~~~~i~~g-~~p~~i~~~~dG~l~v~~~~~-~~~~-----~~-~~~~~~v~~id~~t~~v~~~~~~~~g~~p~~la 231 (328)
T 3dsm_A 160 ETDKVVDELTIG-IQPTSLVMDKYNKMWTITDGG-YEGS-----PY-GYEAPSLYRIDAETFTVEKQFKFKLGDWPSEVQ 231 (328)
T ss_dssp TTTEEEEEEECS-SCBCCCEECTTSEEEEEBCCB-CTTC-----SS-CBCCCEEEEEETTTTEEEEEEECCTTCCCEEEE
T ss_pred CCCeEEEEEEcC-CCccceEEcCCCCEEEEECCC-ccCC-----cc-ccCCceEEEEECCCCeEEEEEecCCCCCceeEE
Confidence 55 3444333 579999999999999998641 1000 00 0113689999999888754332 134799999
Q ss_pred EcCCCCEEEEEecceeEEeecCCCCce--eEEeccCCCCCCceEECC-CCCEEEEEecCCchhhhhhhcChhHHHHHHhc
Q 018705 197 LSKNEDFVVVCESWKRYWLKGDRAGIL--DAFIENLPGGPDNINLAP-DGSFWIGLIKMNQTGVRAIQKCREKWELLDAY 273 (351)
Q Consensus 197 ~~~dg~~lyv~~~~~~~~i~~~~~~~~--~~~~~~~~g~pd~i~~d~-~G~lwva~~~~~~~~~~~~~~~~~~~~~~~~~ 273 (351)
+++|+++||+++. ..+.++ ...++. ..+.......|+++++|+ +|+|||+....
T Consensus 232 ~~~d~~~lyv~~~-~v~~~d-~~t~~~~~~~~~~~~~~~p~gi~vdp~~g~lyva~~~~--------------------- 288 (328)
T 3dsm_A 232 LNGTRDTLYWINN-DIWRMP-VEADRVPVRPFLEFRDTKYYGLTVNPNNGEVYVADAID--------------------- 288 (328)
T ss_dssp ECTTSCEEEEESS-SEEEEE-TTCSSCCSSCSBCCCSSCEEEEEECTTTCCEEEEECTT---------------------
T ss_pred EecCCCEEEEEcc-EEEEEE-CCCCceeeeeeecCCCCceEEEEEcCCCCeEEEEcccc---------------------
Confidence 9999999999886 322222 222221 111111124689999997 78999997320
Q ss_pred cchhhcccCCCCCCceEEEEEECCCCeEEEEEEC
Q 018705 274 PGLISLLLPMGSDAGARVVKVDGNDGKIIRDFND 307 (351)
Q Consensus 274 ~~~~~~~~~~~~~~~~~v~~~~~~~g~~~~~~~~ 307 (351)
-...+.|.+||+ +|+.+..+..
T Consensus 289 -----------y~~~~~V~v~d~-~g~~~~~i~~ 310 (328)
T 3dsm_A 289 -----------YQQQGIVYRYSP-QGKLIDEFYV 310 (328)
T ss_dssp -----------SSSEEEEEEECT-TCCEEEEEEE
T ss_pred -----------cccCCEEEEECC-CCCEEEEEEe
Confidence 012367999999 8999988863
No 25
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=99.73 E-value=5.5e-15 Score=137.42 Aligned_cols=227 Identities=13% Similarity=0.084 Sum_probs=159.6
Q ss_pred ceEEEeeCCCeEEEEEcCCEEEEEEcCCCeEEEEeecCCccccceEEc-CCCCEEEEeCCC-CeEEEcCCC--eEEe-cC
Q 018705 55 EDVSVVVSKGALYTATRDGWVKYFILHNETLVNWKHIDSQSLLGLTTT-KDGGVILCDNEK-GLLKVTEEG--VEAI-VP 129 (351)
Q Consensus 55 e~i~~d~~~g~lyv~~~~g~I~~~d~~~g~~~~~~~~~~~p~~gl~~d-~~G~L~v~d~~~-gl~~~~~~g--~~~l-~~ 129 (351)
.+.+.+ .+..|+++... .|.+++..+...+.......+|. ++++| .+++||++|... .|++++.+| .+.+ ..
T Consensus 37 ~C~~~~-~~~~ll~~~~~-~I~~i~~~g~~~~~~~~~~~~~~-~l~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~~~~ 113 (349)
T 3v64_C 37 SCKALG-PEPVLLFANRI-DIRQVLPHRSEYTLLLNNLENAI-ALDFHHRRELVFWSDVTLDRILRANLNGSNVEEVVST 113 (349)
T ss_dssp CEEESS-SCCEEEEECBS-CEEEECTTSCCEEEEECSCSCEE-EEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECS
T ss_pred cccccc-cCceeEeeccc-ceEEEeCCCCeeEEeecCCCceE-EEEEeccccEEEEEeccCCceEEEecCCCCceEEEeC
Confidence 455555 35667776655 49999986666666555567799 99999 567999999765 467777655 4444 34
Q ss_pred CCCCcccEEEcc-CCcEEEEeCCCccCCcccccccccccCCceEEEEeCCCCeEEEee-cCccccceEEEcCCCCEEEEE
Q 018705 130 DASFTNDVIAAS-DGTLYFTVASTKYTPTDFYKDMAEGKPYGQLRKYDPKLKETTVLH-EGFYFANGIALSKNEDFVVVC 207 (351)
Q Consensus 130 ~~~~~n~l~~d~-dG~ly~t~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~~~~~~~~-~~~~~~ngi~~~~dg~~lyv~ 207 (351)
....|+++++|+ +|+||+++.. .++|.++++++...+.+. ..+..|+||+++|++..||++
T Consensus 114 ~~~~p~glavd~~~g~ly~~d~~-----------------~~~I~~~~~dG~~~~~l~~~~l~~P~~iavdp~~g~ly~t 176 (349)
T 3v64_C 114 GLESPGGLAVDWVHDKLYWTDSG-----------------TSRIEVANLDGAHRKVLLWQSLEKPRAIALHPMEGTIYWT 176 (349)
T ss_dssp SCSCCCEEEEETTTTEEEEEETT-----------------TTEEEEEETTSCSCEEEECTTCSCEEEEEEETTTTEEEEE
T ss_pred CCCCccEEEEecCCCeEEEEcCC-----------------CCeEEEEcCCCCceEEEEeCCCCCcceEEEecCcCeEEEe
Confidence 447899999997 5789999976 458999998755444443 567899999999977789999
Q ss_pred ecce--eEEeecCCCCceeEEeccCCCCCCceEECC-CCCEEEEEecCCchhhhhhhcChhHHHHHHhccchhhcccCCC
Q 018705 208 ESWK--RYWLKGDRAGILDAFIENLPGGPDNINLAP-DGSFWIGLIKMNQTGVRAIQKCREKWELLDAYPGLISLLLPMG 284 (351)
Q Consensus 208 ~~~~--~~~i~~~~~~~~~~~~~~~~g~pd~i~~d~-~G~lwva~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 284 (351)
+... +++..+......+.+....-..|+|+++|+ +|+||++....
T Consensus 177 d~~~~~~I~r~~~dG~~~~~~~~~~~~~PnGla~d~~~~~lY~aD~~~-------------------------------- 224 (349)
T 3v64_C 177 DWGNTPRIEASSMDGSGRRIIADTHLFWPNGLTIDYAGRRMYWVDAKH-------------------------------- 224 (349)
T ss_dssp ECSSSCEEEEEETTSCSCEESCCSSCSCEEEEEEETTTTEEEEEETTT--------------------------------
T ss_pred ccCCCCEEEEEeCCCCCcEEEEECCCCCcceEEEeCCCCEEEEEECCC--------------------------------
Confidence 9764 444432221222333322223689999995 67899997531
Q ss_pred CCCceEEEEEECCCCeEEEEEECCCCCcccceeEEEEECCEEEEEecCCCeEEEEeC
Q 018705 285 SDAGARVVKVDGNDGKIIRDFNDPDATYISFVTSAAEFDGNLYLASLQSNFIGILPL 341 (351)
Q Consensus 285 ~~~~~~v~~~~~~~g~~~~~~~~~~g~~~~~~~~~~~~~g~L~ig~~~~~~i~~~~~ 341 (351)
..|.+++. +|+....+-.. + ...+.++...++.||++...++.|.+++.
T Consensus 225 ----~~I~~~~~-dG~~~~~~~~~-~--~~~P~giav~~~~ly~td~~~~~V~~~~~ 273 (349)
T 3v64_C 225 ----HVIERANL-DGSHRKAVISQ-G--LPHPFAITVFEDSLYWTDWHTKSINSANK 273 (349)
T ss_dssp ----TEEEEEET-TSCSCEEEECS-S--CSSEEEEEEETTEEEEEETTTTEEEEEET
T ss_pred ----CEEEEEeC-CCCceEEEEeC-C--CCCceEEEEECCEEEEecCCCCeEEEEEc
Confidence 36889998 88644444321 1 23466666688999999999999999983
No 26
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=99.73 E-value=2.1e-15 Score=145.05 Aligned_cols=241 Identities=13% Similarity=0.134 Sum_probs=167.9
Q ss_pred CCCcCCCceEEEee-CCCeEEEEEc-CCEEEEEEcCCCeEEEEeecC----CccccceEE-------cCCCC-EEEEeCC
Q 018705 48 EGCVNHPEDVSVVV-SKGALYTATR-DGWVKYFILHNETLVNWKHID----SQSLLGLTT-------TKDGG-VILCDNE 113 (351)
Q Consensus 48 ~~~~~~pe~i~~d~-~~g~lyv~~~-~g~I~~~d~~~g~~~~~~~~~----~~p~~gl~~-------d~~G~-L~v~d~~ 113 (351)
...+..|.++++|| ++++||+... .++|.++|.+++.+..+.... .+|. +|++ |++|+ ||+++..
T Consensus 135 ~~~~~~p~~la~dp~~~~~Lyv~~~~~~~i~~ID~~~~~v~~l~~~~~~~~~~p~-~ia~~~~~~~~d~~G~~lyvad~~ 213 (496)
T 3kya_A 135 CCGFSDNGRLAFDPLNKDHLYICYDGHKAIQLIDLKNRMLSSPLNINTIPTNRIR-SIAFNKKIEGYADEAEYMIVAIDY 213 (496)
T ss_dssp CBCCCSEEEEEEETTEEEEEEEEEETEEEEEEEETTTTEEEEEECCTTSSCSBEE-EEEECCCBTTTBCTTCEEEEEECC
T ss_pred ccccCCCCEEEEccCCCCEEEEEECCCCeEEEEECCCCEEEEEEccCccccCCCc-EEEEeecccccCCCCCEEEEEeCC
Confidence 44567899999997 4788998765 467999999888887765432 3689 9999 99997 9999977
Q ss_pred C-------CeEEEcC--CC-e------EEecCCCCCcccEEEcc-CCcEEEEeCCCccCCcccccccccccCCceEEEEe
Q 018705 114 K-------GLLKVTE--EG-V------EAIVPDASFTNDVIAAS-DGTLYFTVASTKYTPTDFYKDMAEGKPYGQLRKYD 176 (351)
Q Consensus 114 ~-------gl~~~~~--~g-~------~~l~~~~~~~n~l~~d~-dG~ly~t~~~~~~~~~~~~~~~~~~~~~g~l~~~d 176 (351)
. .++.+++ +| . ..+. ....|+++++++ +|.||+++.. .+.|++||
T Consensus 214 ~~~~~~~~~V~~i~r~~~G~~~~~~~~~~v~-~~~~p~giavdp~~g~LYvtd~~-----------------~g~V~r~d 275 (496)
T 3kya_A 214 DGKGDESPSVYIIKRNADGTFDDRSDIQLIA-AYKQCNGATIHPINGELYFNSYE-----------------KGQVFRLD 275 (496)
T ss_dssp CTTGGGEEEEEEEECCTTSCCSTTSCEEEEE-EESCCCCEEECTTTCCEEEEETT-----------------TTEEEEEC
T ss_pred CCCcccCceEEEEecCCCCceeecccceeec-cCCCceEEEEcCCCCeEEEEECC-----------------CCEEEEEe
Confidence 5 2566653 34 3 2343 236899999999 6799999975 56899999
Q ss_pred CC-------CCeE-------------EEee-cCccccceEEEcCCCCEEEEEecce-eEEee--cCCCCc---eeEEec-
Q 018705 177 PK-------LKET-------------TVLH-EGFYFANGIALSKNEDFVVVCESWK-RYWLK--GDRAGI---LDAFIE- 228 (351)
Q Consensus 177 ~~-------~~~~-------------~~~~-~~~~~~ngi~~~~dg~~lyv~~~~~-~~~i~--~~~~~~---~~~~~~- 228 (351)
++ +++. +.+. .....|.+|+++|+|+.|||+++.+ +++.. +...+. ...++.
T Consensus 276 ~~~~~~~~~tg~~~tp~~~~~~g~~~~l~~~~~~~~p~~ia~~p~G~~lYvaD~~~h~I~kid~dg~~~~~~~~~~~aG~ 355 (496)
T 3kya_A 276 LVDYFKTIKNGGSWDPIVKNNPNTFKQLFTIADPSWEFQIFIHPTGKYAYFGVINNHYFMRSDYDEIKKEFITPYNFVGG 355 (496)
T ss_dssp HHHHHHHHHTTCCCCCBGGGCTTTEEEEEECSSSSCCEEEEECTTSSEEEEEETTTTEEEEEEEETTTTEECCCEEEEEB
T ss_pred cccccccccCceeecccccccccccceeEecCCCCCceEEEEcCCCCEEEEEeCCCCEEEEEecCCCcceecccEEecCC
Confidence 87 5543 1111 2235688999999999999999877 55442 122222 123332
Q ss_pred -cCCC------------CCC-ceEEC-------CCCCEEEEEecCCchhhhhhhcChhHHHHHHhccchhhcccCCCCCC
Q 018705 229 -NLPG------------GPD-NINLA-------PDGSFWIGLIKMNQTGVRAIQKCREKWELLDAYPGLISLLLPMGSDA 287 (351)
Q Consensus 229 -~~~g------------~pd-~i~~d-------~~G~lwva~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 287 (351)
...| .|. +++.| ++|+|||+...
T Consensus 356 ~g~~G~~DG~~~~a~f~~P~~gv~vd~~~~~~~~~g~lyVaD~~------------------------------------ 399 (496)
T 3kya_A 356 YKQSGYRDDVGTEARMNNPCQGVFVKNPDYTGEEEYDFYFVDRL------------------------------------ 399 (496)
T ss_dssp TTBCCCBCCBGGGCBCSSEEEEEEEECTTCCSSCCEEEEEEEGG------------------------------------
T ss_pred CCCCcccCCcccccccCCCeEEEEEccccccccCCCeEEEEECC------------------------------------
Confidence 1112 366 67777 68999999754
Q ss_pred ceEEEEEECCCCeEEEEEECC--------------CC-----CcccceeEEEEEC--CEEEEEecCCCeEEEEeCCCC
Q 018705 288 GARVVKVDGNDGKIIRDFNDP--------------DA-----TYISFVTSAAEFD--GNLYLASLQSNFIGILPLDGP 344 (351)
Q Consensus 288 ~~~v~~~~~~~g~~~~~~~~~--------------~g-----~~~~~~~~~~~~~--g~L~ig~~~~~~i~~~~~~~~ 344 (351)
...|.+|++ +|++....-.. +| ..+..+++++.+. |.|||+...+.+|.++.+.+.
T Consensus 400 N~rIr~i~~-~G~v~TiaG~g~~~~~~~~~~~G~~dG~~~~~a~f~~P~gIavd~~~g~lyVaD~~N~rIrki~~~~~ 476 (496)
T 3kya_A 400 NFCVRKVTP-EGIVSTYAGRGASTSLADGNQWGTDDGDLREVARFRDVSGLVYDDVKEMFYVHDQVGHTIRTISMEQE 476 (496)
T ss_dssp GTEEEEECT-TCBEEEEEESCTTHHHHHSCSCCCCCEETTTTCCCSSEEEEEEETTTTEEEEEETTTTEEEEEEECCC
T ss_pred CCEEEEEeC-CCCEEEEecccccccccCccccccCCCCchhhhhcCCCcEEEEECCCCEEEEEeCCCCEEEEEECCCC
Confidence 236889999 99755433211 12 1245577888663 899999999999999997664
No 27
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=99.71 E-value=6.6e-15 Score=138.76 Aligned_cols=228 Identities=13% Similarity=0.089 Sum_probs=160.4
Q ss_pred CceEEEeeCCCeEEEEEcCCEEEEEEcCCCeEEEEeecCCccccceEEc-CCCCEEEEeCCC-CeEEEcCCC--eEEe-c
Q 018705 54 PEDVSVVVSKGALYTATRDGWVKYFILHNETLVNWKHIDSQSLLGLTTT-KDGGVILCDNEK-GLLKVTEEG--VEAI-V 128 (351)
Q Consensus 54 pe~i~~d~~~g~lyv~~~~g~I~~~d~~~g~~~~~~~~~~~p~~gl~~d-~~G~L~v~d~~~-gl~~~~~~g--~~~l-~ 128 (351)
-.+.+.+ ....|+++... .|.+++..++..+.+......|. ++++| .+++||++|... .|++++.+| .+.+ .
T Consensus 79 ~~C~~~~-~~~~l~~~~~~-~I~~i~~~~~~~~~~~~~~~~~~-gl~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~~~ 155 (386)
T 3v65_B 79 RSCKALG-PEPVLLFANRI-DIRQVLPHRSEYTLLLNNLENAI-ALDFHHRRELVFWSDVTLDRILRANLNGSNVEEVVS 155 (386)
T ss_dssp SCEEECS-SCCEEEEECBS-CEEEECTTSCCCEEEECSCSCEE-EEEEETTTTEEEEEETTTTEEEEEETTSCCEEEEEC
T ss_pred CeECCcc-ccceeEeecCc-cceeeccCCCcEEEEecCCCccE-EEEEecCCCeEEEEeCCCCcEEEEecCCCCcEEEEe
Confidence 3455555 35667776654 59999997666666666667899 99999 467899999765 466777655 4443 3
Q ss_pred CCCCCcccEEEcc-CCcEEEEeCCCccCCcccccccccccCCceEEEEeCCCCeEEEe-ecCccccceEEEcCCCCEEEE
Q 018705 129 PDASFTNDVIAAS-DGTLYFTVASTKYTPTDFYKDMAEGKPYGQLRKYDPKLKETTVL-HEGFYFANGIALSKNEDFVVV 206 (351)
Q Consensus 129 ~~~~~~n~l~~d~-dG~ly~t~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~~~~~~~-~~~~~~~ngi~~~~dg~~lyv 206 (351)
.....|+++++|+ +|+||+++.. .++|.++++++...+.+ ...+..|+||+++|++..||+
T Consensus 156 ~~~~~p~glavd~~~g~lY~~d~~-----------------~~~I~~~~~dg~~~~~l~~~~l~~P~giavdp~~g~ly~ 218 (386)
T 3v65_B 156 TGLESPGGLAVDWVHDKLYWTDSG-----------------TSRIEVANLDGAHRKVLLWQSLEKPRAIALHPMEGTIYW 218 (386)
T ss_dssp SSCSCCCCEEEETTTTEEEEEETT-----------------TTEEEECBTTSCSCEEEECSSCSCEEEEEEETTTTEEEE
T ss_pred CCCCCccEEEEEeCCCeEEEEcCC-----------------CCeEEEEeCCCCceEEeecCCCCCCcEEEEEcCCCeEEE
Confidence 4447899999997 5789999976 35899998875544443 356789999999998888999
Q ss_pred Eecce--eEEeecCCCCceeEEeccCCCCCCceEEC-CCCCEEEEEecCCchhhhhhhcChhHHHHHHhccchhhcccCC
Q 018705 207 CESWK--RYWLKGDRAGILDAFIENLPGGPDNINLA-PDGSFWIGLIKMNQTGVRAIQKCREKWELLDAYPGLISLLLPM 283 (351)
Q Consensus 207 ~~~~~--~~~i~~~~~~~~~~~~~~~~g~pd~i~~d-~~G~lwva~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 283 (351)
++... +++..+......+.+....-..|+|+++| .+++||++....
T Consensus 219 td~~~~~~I~r~~~dG~~~~~~~~~~~~~PnGlavd~~~~~lY~aD~~~------------------------------- 267 (386)
T 3v65_B 219 TDWGNTPRIEASSMDGSGRRIIADTHLFWPNGLTIDYAGRRMYWVDAKH------------------------------- 267 (386)
T ss_dssp EECSSSCEEEEEETTSCSCEEEECSSCSCEEEEEEEGGGTEEEEEETTT-------------------------------
T ss_pred eccCCCCEEEEEeCCCCCcEEEEECCCCCeeeEEEeCCCCEEEEEECCC-------------------------------
Confidence 99765 44443322222333332222369999999 467899997531
Q ss_pred CCCCceEEEEEECCCCeEEEEEECCCCCcccceeEEEEECCEEEEEecCCCeEEEEeC
Q 018705 284 GSDAGARVVKVDGNDGKIIRDFNDPDATYISFVTSAAEFDGNLYLASLQSNFIGILPL 341 (351)
Q Consensus 284 ~~~~~~~v~~~~~~~g~~~~~~~~~~g~~~~~~~~~~~~~g~L~ig~~~~~~i~~~~~ 341 (351)
..|.+++. +|.....+... + ...+.++...++.||++...+.+|.+++.
T Consensus 268 -----~~I~~~d~-dG~~~~~~~~~-~--~~~P~giav~~~~ly~td~~~~~V~~~~~ 316 (386)
T 3v65_B 268 -----HVIERANL-DGSHRKAVISQ-G--LPHPFAITVFEDSLYWTDWHTKSINSANK 316 (386)
T ss_dssp -----TEEEEECT-TSCSCEEEECS-S--CSSEEEEEEETTEEEEEETTTTEEEEEET
T ss_pred -----CEEEEEeC-CCCeeEEEEEC-C--CCCceEEEEECCEEEEeeCCCCeEEEEEC
Confidence 36889998 87544444321 2 23456676788999999999999999983
No 28
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=99.71 E-value=3.7e-15 Score=136.63 Aligned_cols=183 Identities=13% Similarity=0.100 Sum_probs=127.9
Q ss_pred cCCCceEEEeeCCCeEEEE-EcCCEEEEEEcCC----CeEEEEee-cCCccccceEEcC-CCCEEEEeCCC-CeEEEcCC
Q 018705 51 VNHPEDVSVVVSKGALYTA-TRDGWVKYFILHN----ETLVNWKH-IDSQSLLGLTTTK-DGGVILCDNEK-GLLKVTEE 122 (351)
Q Consensus 51 ~~~pe~i~~d~~~g~lyv~-~~~g~I~~~d~~~----g~~~~~~~-~~~~p~~gl~~d~-~G~L~v~d~~~-gl~~~~~~ 122 (351)
+..|+++++|+.++.+|+. ..+++|++++..+ ...+.+.. ....|. ||++|+ .++||+++... .+.+++.+
T Consensus 29 ~~~p~g~~~d~~~~~ly~~D~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~-glavd~~~~~ly~~d~~~~~I~~~~~~ 107 (316)
T 1ijq_A 29 LRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPD-GLAVDWIHSNIYWTDSVLGTVSVADTK 107 (316)
T ss_dssp CSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCCC-EEEEETTTTEEEEEETTTTEEEEEETT
T ss_pred CCceEEEEEEeCCCEEEEEECCCCcEEEEECCCCCCCcccEEEEeCCCCCcC-EEEEeecCCeEEEEECCCCEEEEEeCC
Confidence 6789999999777777665 4578999999854 22233322 235788 999995 67899999765 46666666
Q ss_pred C--eEEecC-CCCCcccEEEcc-CCcEEEEeCCCccCCcccccccccccCCceEEEEeCCCCeEEEee-cCccccceEEE
Q 018705 123 G--VEAIVP-DASFTNDVIAAS-DGTLYFTVASTKYTPTDFYKDMAEGKPYGQLRKYDPKLKETTVLH-EGFYFANGIAL 197 (351)
Q Consensus 123 g--~~~l~~-~~~~~n~l~~d~-dG~ly~t~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~~~~~~~~-~~~~~~ngi~~ 197 (351)
| .+.+.. ....|+++++|| +|.+|+++... .++|+++++++...+.+. ..+..|+||++
T Consensus 108 g~~~~~~~~~~~~~P~~iavdp~~g~ly~~d~~~----------------~~~I~~~~~dG~~~~~~~~~~~~~P~gla~ 171 (316)
T 1ijq_A 108 GVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGT----------------PAKIKKGGLNGVDIYSLVTENIQWPNGITL 171 (316)
T ss_dssp SSSEEEEEECTTCCEEEEEEETTTTEEEEEECSS----------------SCEEEEEETTSCCEEEEECSSCSCEEEEEE
T ss_pred CCceEEEEECCCCCcceEEeCCCCCEEEEEccCC----------------CCeEEEEcCCCCCeEEEEECCCCCceEEEE
Confidence 6 444443 347899999998 67899998641 268999998755554443 46789999999
Q ss_pred cCCCCEEEEEecce-eEEeecCCCCceeEEecc--CCCCCCceEECCCCCEEEEEec
Q 018705 198 SKNEDFVVVCESWK-RYWLKGDRAGILDAFIEN--LPGGPDNINLAPDGSFWIGLIK 251 (351)
Q Consensus 198 ~~dg~~lyv~~~~~-~~~i~~~~~~~~~~~~~~--~~g~pd~i~~d~~G~lwva~~~ 251 (351)
+++++.||+++... ++...+......+.+... ....|+++++| +|++|++...
T Consensus 172 d~~~~~lY~~D~~~~~I~~~d~dg~~~~~~~~~~~~~~~P~giav~-~~~ly~~d~~ 227 (316)
T 1ijq_A 172 DLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVF-EDKVFWTDII 227 (316)
T ss_dssp ETTTTEEEEEETTTTEEEEEETTSCSCEEEEECTTTTSSEEEEEEE-TTEEEEEETT
T ss_pred eccCCEEEEEECCCCeEEEEecCCCceEEEeecCCccCCcEEEEEE-CCEEEEEECC
Confidence 99888899999876 554433222233444432 23468999997 4789998743
No 29
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=99.70 E-value=2.1e-14 Score=127.91 Aligned_cols=219 Identities=13% Similarity=0.107 Sum_probs=148.6
Q ss_pred eEEEEEcCCEEEEEEcCCCeEE------EEeecCCccccceEEcC-CCCEEEEeCCC-CeEEEcCCC--eEEec-CCCCC
Q 018705 65 ALYTATRDGWVKYFILHNETLV------NWKHIDSQSLLGLTTTK-DGGVILCDNEK-GLLKVTEEG--VEAIV-PDASF 133 (351)
Q Consensus 65 ~lyv~~~~g~I~~~d~~~g~~~------~~~~~~~~p~~gl~~d~-~G~L~v~d~~~-gl~~~~~~g--~~~l~-~~~~~ 133 (351)
.||++.. ++|++++.+++..+ .+.....+|. ++++|+ +++||+++... .+++++.+| .+.+. .....
T Consensus 3 ~l~~~~~-~~I~~~~~~g~~~~~~~~~~~~~~~~~~~~-gi~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~ 80 (267)
T 1npe_A 3 HLLFAQT-GKIERLPLERNTMKKTEAKAFLHIPAKVII-GLAFDCVDKVVYWTDISEPSIGRASLHGGEPTTIIRQDLGS 80 (267)
T ss_dssp EEEEEEE-EEEEEEEESSSCBCGGGCEEEEEEEEEEEE-EEEEETTTTEEEEEETTTTEEEEEESSSCCCEEEECTTCCC
T ss_pred EEEEEcC-CeEEEEEecCcccccccceeeecCCCCcEE-EEEEecCCCEEEEEECCCCEEEEEecCCCCcEEEEECCCCC
Confidence 4566554 47999998554321 2222345788 999997 56899999765 467777655 44443 33468
Q ss_pred cccEEEccC-CcEEEEeCCCccCCcccccccccccCCceEEEEeCCCCeEEEee-cCccccceEEEcCCCCEEEEEecc-
Q 018705 134 TNDVIAASD-GTLYFTVASTKYTPTDFYKDMAEGKPYGQLRKYDPKLKETTVLH-EGFYFANGIALSKNEDFVVVCESW- 210 (351)
Q Consensus 134 ~n~l~~d~d-G~ly~t~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~~~~~~~~-~~~~~~ngi~~~~dg~~lyv~~~~- 210 (351)
|+++++|++ |++|+++.. .++|.+++.++...+.+. .++..|++|++++++..||+++..
T Consensus 81 p~~ia~d~~~~~lyv~d~~-----------------~~~I~~~~~~g~~~~~~~~~~~~~P~~i~vd~~~g~lyv~~~~~ 143 (267)
T 1npe_A 81 PEGIALDHLGRTIFWTDSQ-----------------LDRIEVAKMDGTQRRVLFDTGLVNPRGIVTDPVRGNLYWTDWNR 143 (267)
T ss_dssp EEEEEEETTTTEEEEEETT-----------------TTEEEEEETTSCSCEEEECSSCSSEEEEEEETTTTEEEEEECCS
T ss_pred ccEEEEEecCCeEEEEECC-----------------CCEEEEEEcCCCCEEEEEECCCCCccEEEEeeCCCEEEEEECCC
Confidence 999999985 689999975 468999998754444333 456789999999977789999875
Q ss_pred -e-eEEeecCCCCceeEEeccCCCCCCceEECCC-CCEEEEEecCCchhhhhhhcChhHHHHHHhccchhhcccCCCCCC
Q 018705 211 -K-RYWLKGDRAGILDAFIENLPGGPDNINLAPD-GSFWIGLIKMNQTGVRAIQKCREKWELLDAYPGLISLLLPMGSDA 287 (351)
Q Consensus 211 -~-~~~i~~~~~~~~~~~~~~~~g~pd~i~~d~~-G~lwva~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 287 (351)
. ++..........+.+.......|.++++|++ ++||++....
T Consensus 144 ~~~~I~~~~~dg~~~~~~~~~~~~~P~gia~d~~~~~lyv~d~~~----------------------------------- 188 (267)
T 1npe_A 144 DNPKIETSHMDGTNRRILAQDNLGLPNGLTFDAFSSQLCWVDAGT----------------------------------- 188 (267)
T ss_dssp SSCEEEEEETTSCCCEEEECTTCSCEEEEEEETTTTEEEEEETTT-----------------------------------
T ss_pred CCcEEEEEecCCCCcEEEEECCCCCCcEEEEcCCCCEEEEEECCC-----------------------------------
Confidence 2 4433221111223333222246899999986 5799987531
Q ss_pred ceEEEEEECCCCeEEEEEECCCCCcccceeEEEEECCEEEEEecCCCeEEEEeCCC
Q 018705 288 GARVVKVDGNDGKIIRDFNDPDATYISFVTSAAEFDGNLYLASLQSNFIGILPLDG 343 (351)
Q Consensus 288 ~~~v~~~~~~~g~~~~~~~~~~g~~~~~~~~~~~~~g~L~ig~~~~~~i~~~~~~~ 343 (351)
..|.++++ +|.....+.. + ...+.++..+++.||++...++.|.+++..+
T Consensus 189 -~~I~~~~~-~g~~~~~~~~--~--~~~P~gi~~d~~~lyva~~~~~~v~~~d~~~ 238 (267)
T 1npe_A 189 -HRAECLNP-AQPGRRKVLE--G--LQYPFAVTSYGKNLYYTDWKTNSVIAMDLAI 238 (267)
T ss_dssp -TEEEEEET-TEEEEEEEEE--C--CCSEEEEEEETTEEEEEETTTTEEEEEETTT
T ss_pred -CEEEEEec-CCCceEEEec--C--CCCceEEEEeCCEEEEEECCCCeEEEEeCCC
Confidence 36899999 8765544432 1 1234566677899999999999999999763
No 30
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=99.70 E-value=3.3e-15 Score=153.47 Aligned_cols=222 Identities=14% Similarity=0.198 Sum_probs=162.7
Q ss_pred ceEEEeeCCCeEEEEEcCCEEEEEEcCCCeEEEEeec---------CCccccceEEcCCCC-EEEEeCCCCeEEEcC-CC
Q 018705 55 EDVSVVVSKGALYTATRDGWVKYFILHNETLVNWKHI---------DSQSLLGLTTTKDGG-VILCDNEKGLLKVTE-EG 123 (351)
Q Consensus 55 e~i~~d~~~g~lyv~~~~g~I~~~d~~~g~~~~~~~~---------~~~p~~gl~~d~~G~-L~v~d~~~gl~~~~~-~g 123 (351)
.+++.| ++|.+|+|+.+++|.++++.+++++.+... ..... +++.|++|+ ||++...+|++++++ ++
T Consensus 360 ~~i~~d-~~g~lWiGt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~-~i~~d~~g~~lWigt~~~Gl~~~d~~~~ 437 (795)
T 4a2l_A 360 SCIVED-KDKNLWIGTNDGGLNLYNPITQRFTSYTLQEDESARGIGSNNIK-AVYVDEKKSLVYIGTHAGGLSILHRNSG 437 (795)
T ss_dssp EEEEEC-TTSCEEEEESSSCEEEECTTTCCEEEECCC------CCSCSCEE-EEEEETTTTEEEEEETTTEEEEEETTTC
T ss_pred EEEEEC-CCCCEEEEECCCCeEEEcCCCCcEEEEecCCCCcccCCCCccEE-EEEEcCCCCEEEEEeCcCceeEEeCCCC
Confidence 478888 689999999987899999988888776421 23456 888999999 999998889999996 56
Q ss_pred -eEEecCC-----CCCcccEEEccCCcEEEEeCCCccCCcccccccccccCCceEEEEeCCCCeEEEeecC-----c--c
Q 018705 124 -VEAIVPD-----ASFTNDVIAASDGTLYFTVASTKYTPTDFYKDMAEGKPYGQLRKYDPKLKETTVLHEG-----F--Y 190 (351)
Q Consensus 124 -~~~l~~~-----~~~~n~l~~d~dG~ly~t~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~~~~~~~~~~-----~--~ 190 (351)
.+.+... ...+.+++.|++|+||++... +|++||+++++.+.+... + .
T Consensus 438 ~~~~~~~~~~~l~~~~v~~i~~d~~g~lwigt~~-------------------Gl~~~~~~~~~~~~~~~~~~~~~~~~~ 498 (795)
T 4a2l_A 438 QVENFNQRNSQLVNENVYAILPDGEGNLWLGTLS-------------------ALVRFNPEQRSFTTIEKEKDGTPVVSK 498 (795)
T ss_dssp CEEEECTTTSCCSCSCEEEEEECSSSCEEEEESS-------------------CEEEEETTTTEEEECCBCTTCCBCCCC
T ss_pred cEEEeecCCCCcCCCeeEEEEECCCCCEEEEecC-------------------ceeEEeCCCCeEEEccccccccccCCc
Confidence 6665431 156788999999999998743 699999998887665421 1 2
Q ss_pred ccceEEEcCCCCEEEEEecce--eEEeecCCCCceeEEec--cCCCC----CCceEECCCCCEEEEEecCCchhhhhhhc
Q 018705 191 FANGIALSKNEDFVVVCESWK--RYWLKGDRAGILDAFIE--NLPGG----PDNINLAPDGSFWIGLIKMNQTGVRAIQK 262 (351)
Q Consensus 191 ~~ngi~~~~dg~~lyv~~~~~--~~~i~~~~~~~~~~~~~--~~~g~----pd~i~~d~~G~lwva~~~~~~~~~~~~~~ 262 (351)
....|..+++|+ +|++...+ ++.... ++. .+.. ...+. ...+..|++|+||+++..
T Consensus 499 ~i~~i~~d~~g~-lWigt~~Gl~~~~~~~---~~~-~~~~~~~~~~l~~~~i~~i~~d~~g~lWigT~~----------- 562 (795)
T 4a2l_A 499 QITTLFRDSHKR-LWIGGEEGLSVFKQEG---LDI-QKASILPVSNVTKLFTNCIYEASNGIIWVGTRE----------- 562 (795)
T ss_dssp CEEEEEECTTCC-EEEEESSCEEEEEEET---TEE-EECCCSCSCGGGGSCEEEEEECTTSCEEEEESS-----------
T ss_pred eEEEEEECCCCC-EEEEeCCceEEEeCCC---CeE-EEecCCCCCCCCCCeeEEEEECCCCCEEEEeCC-----------
Confidence 346788899997 99988755 444332 222 2211 11122 234678999999999743
Q ss_pred ChhHHHHHHhccchhhcccCCCCCCceEEEEEECCCCeEEEEEECCCCCcccceeEEEEE-CCEEEEEecCCCeEEEEeC
Q 018705 263 CREKWELLDAYPGLISLLLPMGSDAGARVVKVDGNDGKIIRDFNDPDATYISFVTSAAEF-DGNLYLASLQSNFIGILPL 341 (351)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~g~~~~~~~~~~g~~~~~~~~~~~~-~g~L~ig~~~~~~i~~~~~ 341 (351)
++.++|+ +.+.+..|...+|.+...+.+++++ +|+||+++ ..+|.+++.
T Consensus 563 ---------------------------Gl~~~d~-~~~~~~~~~~~~gl~~~~i~~i~~d~~g~lWi~t--~~Gl~~~~~ 612 (795)
T 4a2l_A 563 ---------------------------GFYCFNE-KDKQIKRYNTTNGLPNNVVYGILEDSFGRLWLST--NRGISCFNP 612 (795)
T ss_dssp ---------------------------CEEEEET-TTTEEEEECGGGTCSCSCEEEEEECTTSCEEEEE--TTEEEEEET
T ss_pred ---------------------------CceeECC-CCCcEEEeCCCCCCchhheEEEEECCCCCEEEEc--CCceEEEcC
Confidence 5899999 7666778876667666678888776 68999999 588999986
Q ss_pred CC
Q 018705 342 DG 343 (351)
Q Consensus 342 ~~ 343 (351)
.+
T Consensus 613 ~~ 614 (795)
T 4a2l_A 613 ET 614 (795)
T ss_dssp TT
T ss_pred CC
Confidence 53
No 31
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=99.70 E-value=2e-15 Score=133.92 Aligned_cols=182 Identities=14% Similarity=0.161 Sum_probs=127.8
Q ss_pred CcCCCceEEEeeCCCeEEEEEcCCEEEEEEcCCCeEEEEeecC-CccccceEEcCCCCEEEEeCCC-CeEEEcCCC--eE
Q 018705 50 CVNHPEDVSVVVSKGALYTATRDGWVKYFILHNETLVNWKHID-SQSLLGLTTTKDGGVILCDNEK-GLLKVTEEG--VE 125 (351)
Q Consensus 50 ~~~~pe~i~~d~~~g~lyv~~~~g~I~~~d~~~g~~~~~~~~~-~~p~~gl~~d~~G~L~v~d~~~-gl~~~~~~g--~~ 125 (351)
....|.+++++ .+|.+|++..+++|+++++.++....+.... ..|. ++++|++|+||+++... .+++++... ..
T Consensus 65 ~~~~p~~i~~~-~~g~l~v~~~~~~i~~~d~~~~~~~~~~~~~~~~p~-~i~~~~~g~l~v~~~~~~~i~~~~~~~~~~~ 142 (270)
T 1rwi_B 65 GLYQPQGLAVD-GAGTVYVTDFNNRVVTLAAGSNNQTVLPFDGLNYPE-GLAVDTQGAVYVADRGNNRVVKLAAGSKTQT 142 (270)
T ss_dssp SCCSCCCEEEC-TTCCEEEEETTTEEEEECTTCSCCEECCCCSCSSEE-EEEECTTCCEEEEEGGGTEEEEECTTCCSCE
T ss_pred CcCCcceeEEC-CCCCEEEEcCCCEEEEEeCCCceEeeeecCCcCCCc-ceEECCCCCEEEEECCCCEEEEEECCCceeE
Confidence 35689999999 4677999887889999998665554443222 5688 99999999999998654 577776433 32
Q ss_pred Eec-CCCCCcccEEEccCCcEEEEeCCCccCCcccccccccccCCceEEEEeCCCCeEEEee-cCccccceEEEcCCCCE
Q 018705 126 AIV-PDASFTNDVIAASDGTLYFTVASTKYTPTDFYKDMAEGKPYGQLRKYDPKLKETTVLH-EGFYFANGIALSKNEDF 203 (351)
Q Consensus 126 ~l~-~~~~~~n~l~~d~dG~ly~t~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~~~~~~~~-~~~~~~ngi~~~~dg~~ 203 (351)
... .....|++++++++|++|+++.. .++|++||++++...... ..+..|++|+++++|.
T Consensus 143 ~~~~~~~~~p~~i~~~~~g~l~v~~~~-----------------~~~i~~~~~~~~~~~~~~~~~~~~p~~i~~d~~g~- 204 (270)
T 1rwi_B 143 VLPFTGLNDPDGVAVDNSGNVYVTDTD-----------------NNRVVKLEAESNNQVVLPFTDITAPWGIAVDEAGT- 204 (270)
T ss_dssp ECCCCSCCSCCCEEECTTCCEEEEEGG-----------------GTEEEEECTTTCCEEECCCSSCCSEEEEEECTTCC-
T ss_pred eeccccCCCceeEEEeCCCCEEEEECC-----------------CCEEEEEecCCCceEeecccCCCCceEEEECCCCC-
Confidence 222 22368999999999999999864 358999998876554432 3457899999999995
Q ss_pred EEEEecce-eEEeecCCCCceeEEeccCCCCCCceEECCCCCEEEEEec
Q 018705 204 VVVCESWK-RYWLKGDRAGILDAFIENLPGGPDNINLAPDGSFWIGLIK 251 (351)
Q Consensus 204 lyv~~~~~-~~~i~~~~~~~~~~~~~~~~g~pd~i~~d~~G~lwva~~~ 251 (351)
+|+++... ++..-+................|.++++|++|++|++...
T Consensus 205 l~v~~~~~~~v~~~~~~~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~ 253 (270)
T 1rwi_B 205 VYVTEHNTNQVVKLLAGSTTSTVLPFTGLNTPLAVAVDSDRTVYVADRG 253 (270)
T ss_dssp EEEEETTTSCEEEECTTCSCCEECCCCSCSCEEEEEECTTCCEEEEEGG
T ss_pred EEEEECCCCcEEEEcCCCCcceeeccCCCCCceeEEECCCCCEEEEECC
Confidence 99998755 4333322212222211111135789999999999999754
No 32
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.70 E-value=4.1e-14 Score=129.85 Aligned_cols=234 Identities=14% Similarity=0.107 Sum_probs=162.6
Q ss_pred CCCceEEEeeCCCeEEEEEc-------CCEEEEEEcCCCeEEEEeecCCccccceEEcCCCC-EEEEeCCC-CeEEEcC-
Q 018705 52 NHPEDVSVVVSKGALYTATR-------DGWVKYFILHNETLVNWKHIDSQSLLGLTTTKDGG-VILCDNEK-GLLKVTE- 121 (351)
Q Consensus 52 ~~pe~i~~d~~~g~lyv~~~-------~g~I~~~d~~~g~~~~~~~~~~~p~~gl~~d~~G~-L~v~d~~~-gl~~~~~- 121 (351)
.+|.+++++++++.+|++.. ++.|+.+|..+++..........|. +++++++|+ +|+++... .+..++.
T Consensus 41 ~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~-~~~~s~dg~~l~v~~~~~~~v~~~d~~ 119 (353)
T 3vgz_A 41 KGAYEMAYSQQENALWLATSQSRKLDKGGVVYRLDPVTLEVTQAIHNDLKPF-GATINNTTQTLWFGNTVNSAVTAIDAK 119 (353)
T ss_dssp SSEEEEEEETTTTEEEEEECCCTTTEESEEEEEECTTTCCEEEEEEESSCCC-SEEEETTTTEEEEEETTTTEEEEEETT
T ss_pred cCccceEECCCCCEEEEEcCCCcCCCCCccEEEEcCCCCeEEEEEecCCCcc-eEEECCCCCEEEEEecCCCEEEEEeCC
Confidence 46889999988889999874 4689999998887655445566788 999999997 89988764 4556664
Q ss_pred CC--eEEecCCC---------CCcccEEEccCCc-EEEEeCCCccCCcccccccccccCCceEEEEeCCCCeEEEeec-C
Q 018705 122 EG--VEAIVPDA---------SFTNDVIAASDGT-LYFTVASTKYTPTDFYKDMAEGKPYGQLRKYDPKLKETTVLHE-G 188 (351)
Q Consensus 122 ~g--~~~l~~~~---------~~~n~l~~d~dG~-ly~t~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~~~~~~~~~-~ 188 (351)
++ ...+.... ..|.+++++++|+ +|+++.. ..+.|++||+++++...... .
T Consensus 120 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~----------------~~~~i~~~d~~~~~~~~~~~~~ 183 (353)
T 3vgz_A 120 TGEVKGRLVLDDRKRTEEVRPLQPRELVADDATNTVYISGIG----------------KESVIWVVDGGNIKLKTAIQNT 183 (353)
T ss_dssp TCCEEEEEESCCCCCCSSCCCCEEEEEEEETTTTEEEEEEES----------------SSCEEEEEETTTTEEEEEECCC
T ss_pred CCeeEEEEecCCCccccccCCCCCceEEECCCCCEEEEEecC----------------CCceEEEEcCCCCceEEEecCC
Confidence 55 34443321 1378899999985 8887742 13579999999887765554 4
Q ss_pred ccccceEEEcCCCCEEEEEecceeEEeecCCCCcee-EEec---cCCCCCCceEECCCCC-EEEEEecCCchhhhhhhcC
Q 018705 189 FYFANGIALSKNEDFVVVCESWKRYWLKGDRAGILD-AFIE---NLPGGPDNINLAPDGS-FWIGLIKMNQTGVRAIQKC 263 (351)
Q Consensus 189 ~~~~ngi~~~~dg~~lyv~~~~~~~~i~~~~~~~~~-~~~~---~~~g~pd~i~~d~~G~-lwva~~~~~~~~~~~~~~~ 263 (351)
...|+++++++||+.+|+++..+.+.+-+...++.. .+.. .....+.+++++++|+ +|++...
T Consensus 184 ~~~~~~~~~s~dg~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~------------ 251 (353)
T 3vgz_A 184 GKMSTGLALDSEGKRLYTTNADGELITIDTADNKILSRKKLLDDGKEHFFINISLDTARQRAFITDSK------------ 251 (353)
T ss_dssp CTTCCCCEEETTTTEEEEECTTSEEEEEETTTTEEEEEEECCCSSSCCCEEEEEEETTTTEEEEEESS------------
T ss_pred CCccceEEECCCCCEEEEEcCCCeEEEEECCCCeEEEEEEcCCCCCCcccceEEECCCCCEEEEEeCC------------
Confidence 456899999999999999887663333333233322 2211 1122455689999997 7777532
Q ss_pred hhHHHHHHhccchhhcccCCCCCCceEEEEEECCCCeEEEEEECCCCCcccceeEEEE--ECCEEEEEecCCCeEEEEeC
Q 018705 264 REKWELLDAYPGLISLLLPMGSDAGARVVKVDGNDGKIIRDFNDPDATYISFVTSAAE--FDGNLYLASLQSNFIGILPL 341 (351)
Q Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~g~~~~~~~~~~g~~~~~~~~~~~--~~g~L~ig~~~~~~i~~~~~ 341 (351)
.+.|..+|.++++.+..+..+.. ..+.. ++..||+++...+.|.++++
T Consensus 252 ------------------------~~~v~~~d~~~~~~~~~~~~~~~------~~~~~s~dg~~l~v~~~~~~~v~~~d~ 301 (353)
T 3vgz_A 252 ------------------------AAEVLVVDTRNGNILAKVAAPES------LAVLFNPARNEAYVTHRQAGKVSVIDA 301 (353)
T ss_dssp ------------------------SSEEEEEETTTCCEEEEEECSSC------CCEEEETTTTEEEEEETTTTEEEEEET
T ss_pred ------------------------CCEEEEEECCCCcEEEEEEcCCC------ceEEECCCCCEEEEEECCCCeEEEEEC
Confidence 13688899877888877764332 12333 34579999988899999997
Q ss_pred CCC
Q 018705 342 DGP 344 (351)
Q Consensus 342 ~~~ 344 (351)
.+.
T Consensus 302 ~~~ 304 (353)
T 3vgz_A 302 KSY 304 (353)
T ss_dssp TTT
T ss_pred CCC
Confidence 654
No 33
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=99.69 E-value=4.9e-15 Score=135.95 Aligned_cols=182 Identities=12% Similarity=0.104 Sum_probs=128.9
Q ss_pred cCCCceEEEeeCCCeEEE-EEcCCEEEEEEcCCCeE--EEEeecCCccccceEEcC-CCCEEEEeCCCC-eEEEcCCC--
Q 018705 51 VNHPEDVSVVVSKGALYT-ATRDGWVKYFILHNETL--VNWKHIDSQSLLGLTTTK-DGGVILCDNEKG-LLKVTEEG-- 123 (351)
Q Consensus 51 ~~~pe~i~~d~~~g~lyv-~~~~g~I~~~d~~~g~~--~~~~~~~~~p~~gl~~d~-~G~L~v~d~~~g-l~~~~~~g-- 123 (351)
+..|.++++|+.++.||. +...++|++++++++.. .........|. |+++|+ .|+||++|...+ +.+++.+|
T Consensus 34 ~~~~~~ld~d~~~~~lyw~D~~~~~I~r~~~~g~~~~~~~~~~~l~~p~-glavd~~~g~ly~~d~~~~~I~~~~~dG~~ 112 (318)
T 3sov_A 34 LEDAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTESVQNVVVSGLLSPD-GLACDWLGEKLYWTDSETNRIEVSNLDGSL 112 (318)
T ss_dssp EEEEEEEEEEGGGTEEEEEETTTTEEEEEETTSSSCCCEEEEECCSCCC-EEEEETTTTEEEEEETTTTEEEEEETTSCS
T ss_pred CCccEEEEEEeCCCEEEEEECCCCcEEEEEccCCCceEEEEcCCCCCcc-EEEEEcCCCeEEEEECCCCEEEEEECCCCc
Confidence 556889999976777654 55688999999865532 22333346789 999995 779999997654 55666666
Q ss_pred eEEec-CCCCCcccEEEcc-CCcEEEEeCCCccCCcccccccccccCCceEEEEeCCCCeEEEe-ecCccccceEEEcCC
Q 018705 124 VEAIV-PDASFTNDVIAAS-DGTLYFTVASTKYTPTDFYKDMAEGKPYGQLRKYDPKLKETTVL-HEGFYFANGIALSKN 200 (351)
Q Consensus 124 ~~~l~-~~~~~~n~l~~d~-dG~ly~t~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~~~~~~~-~~~~~~~ngi~~~~d 200 (351)
.+.+. .....|++|++|+ +|.||+++... .++|+++++++...+.+ ..++..||||+++++
T Consensus 113 ~~~l~~~~~~~P~giavdp~~g~ly~td~~~----------------~~~I~r~~~dG~~~~~~~~~~l~~Pnglavd~~ 176 (318)
T 3sov_A 113 RKVLFWQELDQPRAIALDPSSGFMYWTDWGE----------------VPKIERAGMDGSSRFIIINSEIYWPNGLTLDYE 176 (318)
T ss_dssp CEEEECSSCSSEEEEEEEGGGTEEEEEECSS----------------SCEEEEEETTSCSCEEEECSSCSCEEEEEEETT
T ss_pred EEEEEeCCCCCccEEEEeCCCCEEEEEecCC----------------CCEEEEEEcCCCCeEEEEECCCCCccEEEEecc
Confidence 45554 4447899999998 47899999641 35899999875444444 356889999999998
Q ss_pred CCEEEEEecce-eEEeecCCCCceeEEeccCCCCCCceEECCCCCEEEEEe
Q 018705 201 EDFVVVCESWK-RYWLKGDRAGILDAFIENLPGGPDNINLAPDGSFWIGLI 250 (351)
Q Consensus 201 g~~lyv~~~~~-~~~i~~~~~~~~~~~~~~~~g~pd~i~~d~~G~lwva~~ 250 (351)
++.||++++.. +++..+......+.+....-+.|+++++|. +++|++..
T Consensus 177 ~~~lY~aD~~~~~I~~~d~dG~~~~~~~~~~~~~P~glav~~-~~lywtd~ 226 (318)
T 3sov_A 177 EQKLYWADAKLNFIHKSNLDGTNRQAVVKGSLPHPFALTLFE-DILYWTDW 226 (318)
T ss_dssp TTEEEEEETTTTEEEEEETTSCSCEEEECSCCSCEEEEEEET-TEEEEEET
T ss_pred CCEEEEEECCCCEEEEEcCCCCceEEEecCCCCCceEEEEeC-CEEEEEec
Confidence 88899999877 555443322333445443335799999985 46777653
No 34
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=99.69 E-value=4.7e-15 Score=148.02 Aligned_cols=187 Identities=11% Similarity=0.075 Sum_probs=139.1
Q ss_pred ecCCCcCCCceEEEeeCCCeEEEE-EcCCEEEEEEcCCCeEEEEeecC-CccccceEEcC-CCCEEEEeCCCC-eEEEcC
Q 018705 46 LGEGCVNHPEDVSVVVSKGALYTA-TRDGWVKYFILHNETLVNWKHID-SQSLLGLTTTK-DGGVILCDNEKG-LLKVTE 121 (351)
Q Consensus 46 i~~~~~~~pe~i~~d~~~g~lyv~-~~~g~I~~~d~~~g~~~~~~~~~-~~p~~gl~~d~-~G~L~v~d~~~g-l~~~~~ 121 (351)
++...+..|.+|++|+.++.+|++ ..+++|++++.+++..+.+...+ ..|. ||++|. .++||++|...+ +.+++.
T Consensus 31 ~~~~~~~~~~~l~~d~~~~~lywtD~~~~~I~r~~~~g~~~~~v~~~g~~~P~-GlAvD~~~~~LY~tD~~~~~I~v~~~ 109 (628)
T 4a0p_A 31 IPLTGVKEASALDFDVTDNRIYWTDISLKTISRAFMNGSALEHVVEFGLDYPE-GMAVDWLGKNLYWADTGTNRIEVSKL 109 (628)
T ss_dssp CCCCSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSCCC-EEEEETTTTEEEEEETTTTEEEEEET
T ss_pred EEcCCCCceEEEEEECCCCEEEEEECCCCeEEEEECCCCCcEEEEeCCCCCcc-eEEEEeCCCEEEEEECCCCEEEEEec
Confidence 444457789999999878887764 56889999998655555554433 5799 999996 568999998765 455556
Q ss_pred CC--eEEec-CCCCCcccEEEcc-CCcEEEEeCCCccCCcccccccccccCCceEEEEeCCCCeEEEeecCccccceEEE
Q 018705 122 EG--VEAIV-PDASFTNDVIAAS-DGTLYFTVASTKYTPTDFYKDMAEGKPYGQLRKYDPKLKETTVLHEGFYFANGIAL 197 (351)
Q Consensus 122 ~g--~~~l~-~~~~~~n~l~~d~-dG~ly~t~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~~~~~~~~~~~~~~ngi~~ 197 (351)
+| .+.+. .....|++|++|| +|.||+||... .++|+++++++...+.+...+..|+||++
T Consensus 110 dG~~~~~l~~~~l~~P~~iavdp~~G~lY~tD~g~----------------~~~I~r~~~dG~~~~~l~~~~~~P~Glal 173 (628)
T 4a0p_A 110 DGQHRQVLVWKDLDSPRALALDPAEGFMYWTEWGG----------------KPKIDRAAMDGSERTTLVPNVGRANGLTI 173 (628)
T ss_dssp TSTTCEEEECSSCCCEEEEEEETTTTEEEEEECSS----------------SCEEEEEETTSCSCEEEECSCSSEEEEEE
T ss_pred CCCcEEEEEeCCCCCcccEEEccCCCeEEEeCCCC----------------CCEEEEEeCCCCceEEEECCCCCcceEEE
Confidence 66 55554 4457899999998 68999999641 35899999987777777788899999999
Q ss_pred cCCCCEEEEEecce-eEEeecCCCCceeEEeccCCCCCCceEECCCCCEEEEEec
Q 018705 198 SKNEDFVVVCESWK-RYWLKGDRAGILDAFIENLPGGPDNINLAPDGSFWIGLIK 251 (351)
Q Consensus 198 ~~dg~~lyv~~~~~-~~~i~~~~~~~~~~~~~~~~g~pd~i~~d~~G~lwva~~~ 251 (351)
+++++.||+++... +++..+......+++...++ .|.+++++. +++|++...
T Consensus 174 D~~~~~LY~aD~~~~~I~~~d~dG~~~~v~~~~l~-~P~glav~~-~~ly~tD~~ 226 (628)
T 4a0p_A 174 DYAKRRLYWTDLDTNLIESSNMLGLNREVIADDLP-HPFGLTQYQ-DYIYWTDWS 226 (628)
T ss_dssp ETTTTEEEEEETTTTEEEEEETTSCSCEEEEECCS-CEEEEEEET-TEEEEEETT
T ss_pred ccccCEEEEEECCCCEEEEEcCCCCceEEeeccCC-CceEEEEEC-CEEEEecCC
Confidence 99988999999877 55544322223345554443 689999986 789998753
No 35
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=99.69 E-value=3.6e-15 Score=152.88 Aligned_cols=225 Identities=11% Similarity=0.075 Sum_probs=162.0
Q ss_pred CceEEEeeCCCeEEEEEcCCEEEEEEcCCCeEEEEee----cCCccccceEEcCCCCEEEEeCCCCeEEEcC-CC-eEEe
Q 018705 54 PEDVSVVVSKGALYTATRDGWVKYFILHNETLVNWKH----IDSQSLLGLTTTKDGGVILCDNEKGLLKVTE-EG-VEAI 127 (351)
Q Consensus 54 pe~i~~d~~~g~lyv~~~~g~I~~~d~~~g~~~~~~~----~~~~p~~gl~~d~~G~L~v~d~~~gl~~~~~-~g-~~~l 127 (351)
..+++.| .+|.+|+++.+++|+++++.+++++.+.. ...... .++.|++|+||++....|++++++ ++ .+.+
T Consensus 365 v~~i~~d-~~g~lWigt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~v~-~i~~d~~g~lWigt~~~Gl~~~~~~~~~~~~~ 442 (781)
T 3v9f_A 365 VSSVCDD-GQGKLWIGTDGGGINVFENGKRVAIYNKENRELLSNSVL-CSLKDSEGNLWFGTYLGNISYYNTRLKKFQII 442 (781)
T ss_dssp EEEEEEC-TTSCEEEEEBSSCEEEEETTEEEEECC-----CCCSBEE-EEEECTTSCEEEEETTEEEEEECSSSCEEEEC
T ss_pred eEEEEEc-CCCCEEEEeCCCcEEEEECCCCeEEEccCCCCCCCcceE-EEEECCCCCEEEEeccCCEEEEcCCCCcEEEe
Confidence 3477888 67999999987779999987666655421 123456 889999999999998789999996 56 6655
Q ss_pred cCC---CCCcccEEEccCCcEEEEeCCCccCCcccccccccccCCceEEEEeCCCCeEEEeecC------ccccceEEEc
Q 018705 128 VPD---ASFTNDVIAASDGTLYFTVASTKYTPTDFYKDMAEGKPYGQLRKYDPKLKETTVLHEG------FYFANGIALS 198 (351)
Q Consensus 128 ~~~---~~~~n~l~~d~dG~ly~t~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~~~~~~~~~~------~~~~ngi~~~ 198 (351)
... ...+.+++.|++|+||++.. ++|++||+++++.+.+... ......|+.+
T Consensus 443 ~~~~~~~~~v~~i~~d~~g~lwigt~-------------------~Gl~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d 503 (781)
T 3v9f_A 443 ELEKNELLDVRVFYEDKNKKIWIGTH-------------------AGVFVIDLASKKVIHHYDTSNSQLLENFVRSIAQD 503 (781)
T ss_dssp CSTTTCCCCEEEEEECTTSEEEEEET-------------------TEEEEEESSSSSCCEEECTTTSSCSCSCEEEEEEC
T ss_pred ccCCCCCCeEEEEEECCCCCEEEEEC-------------------CceEEEeCCCCeEEecccCcccccccceeEEEEEc
Confidence 431 25688899999999999874 3799999988776554321 1346678899
Q ss_pred CCCCEEEEEecc-eeEEeecCCCCceeEEeccCCCCCC----ceEECCCCCEEEEEecCCchhhhhhhcChhHHHHHHhc
Q 018705 199 KNEDFVVVCESW-KRYWLKGDRAGILDAFIENLPGGPD----NINLAPDGSFWIGLIKMNQTGVRAIQKCREKWELLDAY 273 (351)
Q Consensus 199 ~dg~~lyv~~~~-~~~~i~~~~~~~~~~~~~~~~g~pd----~i~~d~~G~lwva~~~~~~~~~~~~~~~~~~~~~~~~~ 273 (351)
++|+ ||++... +.+.+. ...++.+.+.. ..+.+. .+..|++|+||+++..
T Consensus 504 ~~g~-lWigt~~~Gl~~~~-~~~~~~~~~~~-~~~l~~~~i~~i~~d~~g~lWi~T~~---------------------- 558 (781)
T 3v9f_A 504 SEGR-FWIGTFGGGVGIYT-PDMQLVRKFNQ-YEGFCSNTINQIYRSSKGQMWLATGE---------------------- 558 (781)
T ss_dssp TTCC-EEEEESSSCEEEEC-TTCCEEEEECT-TTTCSCSCEEEEEECTTSCEEEEETT----------------------
T ss_pred CCCC-EEEEEcCCCEEEEe-CCCCeEEEccC-CCCCCCCeeEEEEECCCCCEEEEECC----------------------
Confidence 9997 9998874 444443 22344444432 223343 4678999999999752
Q ss_pred cchhhcccCCCCCCceEE-EEEECCCCeEEEEEECCCCCcccceeEEEEE-CCEEEEEecCCCeEEEEeCCC
Q 018705 274 PGLISLLLPMGSDAGARV-VKVDGNDGKIIRDFNDPDATYISFVTSAAEF-DGNLYLASLQSNFIGILPLDG 343 (351)
Q Consensus 274 ~~~~~~~~~~~~~~~~~v-~~~~~~~g~~~~~~~~~~g~~~~~~~~~~~~-~g~L~ig~~~~~~i~~~~~~~ 343 (351)
++ .++|+ +.+.+..|...+|.+...+.+++++ +|+||+++ .++|.+++..+
T Consensus 559 ----------------Glv~~~d~-~~~~~~~~~~~~gl~~~~i~~i~~d~~g~lW~~t--~~Gl~~~~~~~ 611 (781)
T 3v9f_A 559 ----------------GLVCFPSA-RNFDYQVFQRKEGLPNTHIRAISEDKNGNIWAST--NTGISCYITSK 611 (781)
T ss_dssp ----------------EEEEESCT-TTCCCEEECGGGTCSCCCCCEEEECSSSCEEEEC--SSCEEEEETTT
T ss_pred ----------------CceEEECC-CCCcEEEccccCCCCCceEEEEEECCCCCEEEEc--CCceEEEECCC
Confidence 45 99999 6655777866667666677788765 68999998 57799998653
No 36
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=99.69 E-value=3.9e-15 Score=133.51 Aligned_cols=181 Identities=12% Similarity=0.230 Sum_probs=128.7
Q ss_pred CcCCCceEEEeeCCCeEEEEEc--CCEEEEEEcCCCeE-EEEee-cCCccccceEEcCCCCEEEEeCCC-CeEEEcCCC-
Q 018705 50 CVNHPEDVSVVVSKGALYTATR--DGWVKYFILHNETL-VNWKH-IDSQSLLGLTTTKDGGVILCDNEK-GLLKVTEEG- 123 (351)
Q Consensus 50 ~~~~pe~i~~d~~~g~lyv~~~--~g~I~~~d~~~g~~-~~~~~-~~~~p~~gl~~d~~G~L~v~d~~~-gl~~~~~~g- 123 (351)
.+..|.+++++..++.+|++.. +++|.+++. +++. ..+.. ....|. ++++|++|++|+++... .+++++++|
T Consensus 75 ~~~~p~~i~~~~~~g~l~v~~~~~~~~i~~~d~-~g~~~~~~~~~~~~~~~-~i~~~~~g~l~v~~~~~~~i~~~~~~g~ 152 (286)
T 1q7f_A 75 QLLYPNRVAVVRNSGDIIVTERSPTHQIQIYNQ-YGQFVRKFGATILQHPR-GVTVDNKGRIIVVECKVMRVIIFDQNGN 152 (286)
T ss_dssp CBSSEEEEEEETTTTEEEEEECGGGCEEEEECT-TSCEEEEECTTTCSCEE-EEEECTTSCEEEEETTTTEEEEECTTSC
T ss_pred cccCceEEEEEcCCCeEEEEcCCCCCEEEEECC-CCcEEEEecCccCCCce-EEEEeCCCCEEEEECCCCEEEEEcCCCC
Confidence 3467899999546889999874 789999996 5554 33422 224688 99999999999998754 577777766
Q ss_pred -eEEecC--CCCCcccEEEccCCcEEEEeCCCccCCcccccccccccCCceEEEEeCCCCeEEEeecC--ccccceEEEc
Q 018705 124 -VEAIVP--DASFTNDVIAASDGTLYFTVASTKYTPTDFYKDMAEGKPYGQLRKYDPKLKETTVLHEG--FYFANGIALS 198 (351)
Q Consensus 124 -~~~l~~--~~~~~n~l~~d~dG~ly~t~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~~~~~~~~~~--~~~~ngi~~~ 198 (351)
...+.. ....|++|+++++|++|+++.. .++|++||+++..+..+... +..|.+|+++
T Consensus 153 ~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~-----------------~~~i~~~~~~g~~~~~~~~~g~~~~p~~i~~d 215 (286)
T 1q7f_A 153 VLHKFGCSKHLEFPNGVVVNDKQEIFISDNR-----------------AHCVKVFNYEGQYLRQIGGEGITNYPIGVGIN 215 (286)
T ss_dssp EEEEEECTTTCSSEEEEEECSSSEEEEEEGG-----------------GTEEEEEETTCCEEEEESCTTTSCSEEEEEEC
T ss_pred EEEEeCCCCccCCcEEEEECCCCCEEEEECC-----------------CCEEEEEcCCCCEEEEEccCCccCCCcEEEEC
Confidence 444432 2367999999999999999864 46899999875545444322 4689999999
Q ss_pred CCCCEEEEEecce--eEEeecCCCCceeEEeccCC-CCCCceEECCCCCEEEEEe
Q 018705 199 KNEDFVVVCESWK--RYWLKGDRAGILDAFIENLP-GGPDNINLAPDGSFWIGLI 250 (351)
Q Consensus 199 ~dg~~lyv~~~~~--~~~i~~~~~~~~~~~~~~~~-g~pd~i~~d~~G~lwva~~ 250 (351)
++|+ +|+++... ++.+-+........+..... ..|.+++++++|++|++..
T Consensus 216 ~~G~-l~v~~~~~~~~i~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~g~l~vs~~ 269 (286)
T 1q7f_A 216 SNGE-ILIADNHNNFNLTIFTQDGQLISALESKVKHAQCFDVALMDDGSVVLASK 269 (286)
T ss_dssp TTCC-EEEEECSSSCEEEEECTTSCEEEEEEESSCCSCEEEEEEETTTEEEEEET
T ss_pred CCCC-EEEEeCCCCEEEEEECCCCCEEEEEcccCCCCcceeEEECCCCcEEEECC
Confidence 9997 99988643 45444432222333332221 2467899999999999953
No 37
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=99.69 E-value=6.7e-15 Score=150.86 Aligned_cols=225 Identities=15% Similarity=0.171 Sum_probs=162.9
Q ss_pred ceEEEeeCCCeEEEEEcCCEEEEEEcCCCeEEEEeec---CCccccceEEcCCCCEEEEeCCCCeEEEcC-CC-eEEecC
Q 018705 55 EDVSVVVSKGALYTATRDGWVKYFILHNETLVNWKHI---DSQSLLGLTTTKDGGVILCDNEKGLLKVTE-EG-VEAIVP 129 (351)
Q Consensus 55 e~i~~d~~~g~lyv~~~~g~I~~~d~~~g~~~~~~~~---~~~p~~gl~~d~~G~L~v~d~~~gl~~~~~-~g-~~~l~~ 129 (351)
.+++.| .+|.||+++..++|+++++++++++.+... ..... .++.|++|+||++.. .|++++++ ++ .+.+..
T Consensus 410 ~~i~~d-~~g~lWigt~~~Gl~~~~~~~~~~~~~~~~~~~~~~v~-~i~~d~~g~lwigt~-~Gl~~~~~~~~~~~~~~~ 486 (781)
T 3v9f_A 410 LCSLKD-SEGNLWFGTYLGNISYYNTRLKKFQIIELEKNELLDVR-VFYEDKNKKIWIGTH-AGVFVIDLASKKVIHHYD 486 (781)
T ss_dssp EEEEEC-TTSCEEEEETTEEEEEECSSSCEEEECCSTTTCCCCEE-EEEECTTSEEEEEET-TEEEEEESSSSSCCEEEC
T ss_pred EEEEEC-CCCCEEEEeccCCEEEEcCCCCcEEEeccCCCCCCeEE-EEEECCCCCEEEEEC-CceEEEeCCCCeEEeccc
Confidence 467777 689999999878899999988888776432 23456 889999999999997 79999996 55 444322
Q ss_pred -C-----CCCcccEEEccCCcEEEEeCCCccCCcccccccccccCCceEEEEeCCCCeEEEeec--Cc--cccceEEEcC
Q 018705 130 -D-----ASFTNDVIAASDGTLYFTVASTKYTPTDFYKDMAEGKPYGQLRKYDPKLKETTVLHE--GF--YFANGIALSK 199 (351)
Q Consensus 130 -~-----~~~~n~l~~d~dG~ly~t~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~~~~~~~~~--~~--~~~ngi~~~~ 199 (351)
. ...+++++.|++|+||++... ++|++||+++++.+.+.. ++ ...++|..++
T Consensus 487 ~~~~~~~~~~i~~i~~d~~g~lWigt~~------------------~Gl~~~~~~~~~~~~~~~~~~l~~~~i~~i~~d~ 548 (781)
T 3v9f_A 487 TSNSQLLENFVRSIAQDSEGRFWIGTFG------------------GGVGIYTPDMQLVRKFNQYEGFCSNTINQIYRSS 548 (781)
T ss_dssp TTTSSCSCSCEEEEEECTTCCEEEEESS------------------SCEEEECTTCCEEEEECTTTTCSCSCEEEEEECT
T ss_pred CcccccccceeEEEEEcCCCCEEEEEcC------------------CCEEEEeCCCCeEEEccCCCCCCCCeeEEEEECC
Confidence 1 156888999999999998753 369999998887776543 22 2345788889
Q ss_pred CCCEEEEEeccee-EEeecCCCCceeEEeccCCCCC----CceEECCCCCEEEEEecCCchhhhhhhcChhHHHHHHhcc
Q 018705 200 NEDFVVVCESWKR-YWLKGDRAGILDAFIENLPGGP----DNINLAPDGSFWIGLIKMNQTGVRAIQKCREKWELLDAYP 274 (351)
Q Consensus 200 dg~~lyv~~~~~~-~~i~~~~~~~~~~~~~~~~g~p----d~i~~d~~G~lwva~~~~~~~~~~~~~~~~~~~~~~~~~~ 274 (351)
+|+ ||++...+. +..+ +..++.+.+.. ..|+| .++..|++|+||+++..
T Consensus 549 ~g~-lWi~T~~Glv~~~d-~~~~~~~~~~~-~~gl~~~~i~~i~~d~~g~lW~~t~~----------------------- 602 (781)
T 3v9f_A 549 KGQ-MWLATGEGLVCFPS-ARNFDYQVFQR-KEGLPNTHIRAISEDKNGNIWASTNT----------------------- 602 (781)
T ss_dssp TSC-EEEEETTEEEEESC-TTTCCCEEECG-GGTCSCCCCCEEEECSSSCEEEECSS-----------------------
T ss_pred CCC-EEEEECCCceEEEC-CCCCcEEEccc-cCCCCCceEEEEEECCCCCEEEEcCC-----------------------
Confidence 997 999887554 5444 33344454432 22333 45788999999999643
Q ss_pred chhhcccCCCCCCceEEEEEECCCCeEEEEEECCCCCcccce--eEEEE-ECCEEEEEecCCCeEEEEeCCCC
Q 018705 275 GLISLLLPMGSDAGARVVKVDGNDGKIIRDFNDPDATYISFV--TSAAE-FDGNLYLASLQSNFIGILPLDGP 344 (351)
Q Consensus 275 ~~~~~~~~~~~~~~~~v~~~~~~~g~~~~~~~~~~g~~~~~~--~~~~~-~~g~L~ig~~~~~~i~~~~~~~~ 344 (351)
++.+|+| +.+.+..|...+|.....+ .+++. .+|+||+|+. +++.+++....
T Consensus 603 ---------------Gl~~~~~-~~~~~~~~~~~dGl~~~~f~~~~~~~~~~G~l~~g~~--~Gl~~f~p~~~ 657 (781)
T 3v9f_A 603 ---------------GISCYIT-SKKCFYTYDHSNNIPQGSFISGCVTKDHNGLIYFGSI--NGLCFFNPDIA 657 (781)
T ss_dssp ---------------CEEEEET-TTTEEEEECGGGTCCSSCEEEEEEEECTTSCEEEEET--TEEEEECSCCG
T ss_pred ---------------ceEEEEC-CCCceEEecccCCccccccccCceEECCCCEEEEECC--CceEEEChhhc
Confidence 5999999 7777888876677654433 24444 3799999995 78999986543
No 38
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=99.68 E-value=1.1e-14 Score=149.61 Aligned_cols=223 Identities=15% Similarity=0.223 Sum_probs=160.0
Q ss_pred ceEEEeeCCCe-EEEEEcCCEEEEEEcCCCeEEEEee-----cCCccccceEEcCCCCEEEEeCCCCeEEEcC-CC-eEE
Q 018705 55 EDVSVVVSKGA-LYTATRDGWVKYFILHNETLVNWKH-----IDSQSLLGLTTTKDGGVILCDNEKGLLKVTE-EG-VEA 126 (351)
Q Consensus 55 e~i~~d~~~g~-lyv~~~~g~I~~~d~~~g~~~~~~~-----~~~~p~~gl~~d~~G~L~v~d~~~gl~~~~~-~g-~~~ 126 (351)
.+++.| .++. ||+++.+++|+++++++++++.+.. ....+. .+..|++|+||++.. .|++++++ ++ .+.
T Consensus 409 ~~i~~d-~~g~~lWigt~~~Gl~~~d~~~~~~~~~~~~~~~l~~~~v~-~i~~d~~g~lwigt~-~Gl~~~~~~~~~~~~ 485 (795)
T 4a2l_A 409 KAVYVD-EKKSLVYIGTHAGGLSILHRNSGQVENFNQRNSQLVNENVY-AILPDGEGNLWLGTL-SALVRFNPEQRSFTT 485 (795)
T ss_dssp EEEEEE-TTTTEEEEEETTTEEEEEETTTCCEEEECTTTSCCSCSCEE-EEEECSSSCEEEEES-SCEEEEETTTTEEEE
T ss_pred EEEEEc-CCCCEEEEEeCcCceeEEeCCCCcEEEeecCCCCcCCCeeE-EEEECCCCCEEEEec-CceeEEeCCCCeEEE
Confidence 477888 6777 9999998889999998888877753 123456 889999999999997 79999996 55 555
Q ss_pred ecCC-----C--CCcccEEEccCCcEEEEeCCCccCCcccccccccccCCceEEEEeCCCCeEEEeec-----Cc--ccc
Q 018705 127 IVPD-----A--SFTNDVIAASDGTLYFTVASTKYTPTDFYKDMAEGKPYGQLRKYDPKLKETTVLHE-----GF--YFA 192 (351)
Q Consensus 127 l~~~-----~--~~~n~l~~d~dG~ly~t~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~~~~~~~~~-----~~--~~~ 192 (351)
+... . ..+++++.|++|++|++... +|++||+++++. .+.. .+ ...
T Consensus 486 ~~~~~~~~~~~~~~i~~i~~d~~g~lWigt~~-------------------Gl~~~~~~~~~~-~~~~~~~~~~l~~~~i 545 (795)
T 4a2l_A 486 IEKEKDGTPVVSKQITTLFRDSHKRLWIGGEE-------------------GLSVFKQEGLDI-QKASILPVSNVTKLFT 545 (795)
T ss_dssp CCBCTTCCBCCCCCEEEEEECTTCCEEEEESS-------------------CEEEEEEETTEE-EECCCSCSCGGGGSCE
T ss_pred ccccccccccCCceEEEEEECCCCCEEEEeCC-------------------ceEEEeCCCCeE-EEecCCCCCCCCCCee
Confidence 4321 1 56788999999999998742 699999887766 3221 12 234
Q ss_pred ceEEEcCCCCEEEEEecceeEEeecCCCCceeEEeccCCCCCCc----eEECCCCCEEEEEecCCchhhhhhhcChhHHH
Q 018705 193 NGIALSKNEDFVVVCESWKRYWLKGDRAGILDAFIENLPGGPDN----INLAPDGSFWIGLIKMNQTGVRAIQKCREKWE 268 (351)
Q Consensus 193 ngi~~~~dg~~lyv~~~~~~~~i~~~~~~~~~~~~~~~~g~pd~----i~~d~~G~lwva~~~~~~~~~~~~~~~~~~~~ 268 (351)
++|+.+++|+ +|++...+.+.++ ...++.+.+. ...|+|++ +..|++|+||+++..
T Consensus 546 ~~i~~d~~g~-lWigT~~Gl~~~d-~~~~~~~~~~-~~~gl~~~~i~~i~~d~~g~lWi~t~~----------------- 605 (795)
T 4a2l_A 546 NCIYEASNGI-IWVGTREGFYCFN-EKDKQIKRYN-TTNGLPNNVVYGILEDSFGRLWLSTNR----------------- 605 (795)
T ss_dssp EEEEECTTSC-EEEEESSCEEEEE-TTTTEEEEEC-GGGTCSCSCEEEEEECTTSCEEEEETT-----------------
T ss_pred EEEEECCCCC-EEEEeCCCceeEC-CCCCcEEEeC-CCCCCchhheEEEEECCCCCEEEEcCC-----------------
Confidence 5788899997 9998766633333 2234444443 22345544 678999999999743
Q ss_pred HHHhccchhhcccCCCCCCceEEEEEECCCCeEEEEEECCCCCcccce--eEEEE-ECCEEEEEecCCCeEEEEeCCCC
Q 018705 269 LLDAYPGLISLLLPMGSDAGARVVKVDGNDGKIIRDFNDPDATYISFV--TSAAE-FDGNLYLASLQSNFIGILPLDGP 344 (351)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~g~~~~~~~~~~g~~~~~~--~~~~~-~~g~L~ig~~~~~~i~~~~~~~~ 344 (351)
++.+|+| +.+.+..|...+|.....+ .+++. .+|+||+|+. +++.+++....
T Consensus 606 ---------------------Gl~~~~~-~~~~~~~~~~~dGl~~~~f~~~~~~~~~~G~l~~g~~--~Gl~~~~p~~~ 660 (795)
T 4a2l_A 606 ---------------------GISCFNP-ETEKFRNFTESDGLQSNQFNTASYCRTSVGQMYFGGI--NGITTFRPELL 660 (795)
T ss_dssp ---------------------EEEEEET-TTTEEEEECGGGTCSCSCEEEEEEEECTTSCEEEEET--TEEEEECGGGC
T ss_pred ---------------------ceEEEcC-CCCcEEEcCCcCCCccccCccCceeECCCCeEEEecC--CceEEEcHHHc
Confidence 6999999 7666778876677655544 34444 4689999995 78999986543
No 39
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=99.68 E-value=1.3e-14 Score=135.08 Aligned_cols=253 Identities=13% Similarity=0.153 Sum_probs=162.1
Q ss_pred CceEecCCCcCCCceEEEeeCCCeEEEEEcCCEEEEEEcCCCeEEEEee------cCCccccceEEcCC----CCEEEEe
Q 018705 42 GLTKLGEGCVNHPEDVSVVVSKGALYTATRDGWVKYFILHNETLVNWKH------IDSQSLLGLTTTKD----GGVILCD 111 (351)
Q Consensus 42 ~~~~i~~~~~~~pe~i~~d~~~g~lyv~~~~g~I~~~d~~~g~~~~~~~------~~~~p~~gl~~d~~----G~L~v~d 111 (351)
.+|+++.+ +..|+++++++ +|.+|++...|+|++++. +|+ +.+.. ....|. ||+++++ |.|||+.
T Consensus 20 ~~~~va~~-l~~P~~ia~~p-dG~l~V~e~~g~I~~~d~-~G~-~~~~~~~v~~~g~~g~~-gia~~pdf~~~g~lyv~~ 94 (354)
T 3a9g_A 20 KISEVASD-LEVPWSIAPLG-GGRYLVTERPGRLVLISP-SGK-KLVASFDVANVGEAGLL-GLALHPEFPKKSWVYLYA 94 (354)
T ss_dssp EEEEEECS-CSCEEEEEEEE-TTEEEEEETTTEEEEECS-SCE-EEEEECCCCCSTTCSEE-EEEECTTTTTSCEEEEEE
T ss_pred EEEEEeCC-CCCCeEEEEcC-CCeEEEEeCCCEEEEEeC-CCc-eEeeccceeecCCCcee-eEEeCCCCCcCCEEEEEE
Confidence 45777776 88999999995 678999999999999985 666 44431 234688 9999986 8999998
Q ss_pred CC--------CCeEEEcC--C-C----eEEecC----C-CCCcccEEEccCCcEEEEeCCCccCCcccccccccccCCce
Q 018705 112 NE--------KGLLKVTE--E-G----VEAIVP----D-ASFTNDVIAASDGTLYFTVASTKYTPTDFYKDMAEGKPYGQ 171 (351)
Q Consensus 112 ~~--------~gl~~~~~--~-g----~~~l~~----~-~~~~n~l~~d~dG~ly~t~~~~~~~~~~~~~~~~~~~~~g~ 171 (351)
.. ..+++++. . + .+++.. . ...+++|++++||.||++..... . .....+ .....|+
T Consensus 95 ~~~~~~~~~~~~v~r~~~~~~~~~~~~~~~l~~~~~~~~~h~~~~l~~~pDG~Lyvt~G~~~-~-~~~~~d--~~~~~G~ 170 (354)
T 3a9g_A 95 SYFAEGGHIRNRVIRGRLDGSTFKLKEVKTLIDGIPGAYIHNGGRIRFGPDGMLYITTGDAA-D-PRLAQD--LSSLAGK 170 (354)
T ss_dssp EEECGGGCEEEEEEEEEECSSSCCEEEEEEEEEEEECCSSCCCCCEEECTTSCEEEECCCTT-C-GGGGTC--TTCCSSE
T ss_pred eccCCCCCcceEEEEEEECCCCcCcCccEEEEEcCCCCCCcCCceEEECCCCcEEEEECCCC-C-CccccC--CCCCCeE
Confidence 63 56788773 2 1 122211 1 25789999999999999975311 0 000000 1123578
Q ss_pred EEEEeCCCC--------eEEEeecCccccceEEEcC-CCCEEEEEecce----eEEeec--CCCC------------cee
Q 018705 172 LRKYDPKLK--------ETTVLHEGFYFANGIALSK-NEDFVVVCESWK----RYWLKG--DRAG------------ILD 224 (351)
Q Consensus 172 l~~~d~~~~--------~~~~~~~~~~~~ngi~~~~-dg~~lyv~~~~~----~~~i~~--~~~~------------~~~ 224 (351)
|+|+++++. ..+.+..++.+|+||++++ +|+ ||+++... .+.+.. ...| -..
T Consensus 171 I~ri~~dG~~p~~npf~~~~i~a~G~rnp~Gla~d~~~g~-l~v~d~g~~~~dei~~i~~G~nyGwp~~~g~~~~~~~~~ 249 (354)
T 3a9g_A 171 ILRVDEEGRPPADNPFPNSPIWSYGHRNPQGIDWHRASGV-MVATEHGPVGHDEVNIILKGGNYGWPLATGKAGRGEFVD 249 (354)
T ss_dssp EEEECTTSCCCTTSSSTTCCEEEECCSCCCEEEECTTTCC-EEEEECCSSSCCEEEEECTTCBCCTTTCCSCCCCTTSCC
T ss_pred EEEEcCCCCCCCCCCCCCCcEEEEccCCcceEEEeCCCCC-EEEEecCCCCCcEEEEecCCCcCCCCcccCCCCCCCCcC
Confidence 999999743 3466778899999999999 565 99999875 343321 1111 000
Q ss_pred E-Eec-cCCCCCCceEE-------CCCCCEEEEEecCCchhhhhhhcChhHHHHHHhccchhhcccCCCCCCceEEEEEE
Q 018705 225 A-FIE-NLPGGPDNINL-------APDGSFWIGLIKMNQTGVRAIQKCREKWELLDAYPGLISLLLPMGSDAGARVVKVD 295 (351)
Q Consensus 225 ~-~~~-~~~g~pd~i~~-------d~~G~lwva~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 295 (351)
. +.- .....|.|+++ +.+|++|++.... +.|.+++
T Consensus 250 p~~~~~~~~~ap~G~~~y~g~~fp~~~G~l~v~~~~~------------------------------------~~v~~~~ 293 (354)
T 3a9g_A 250 PVIDTGSETWAPSGASFVHGDMFPGLRGWLLIACLRG------------------------------------SMLAAVN 293 (354)
T ss_dssp CSEECTTCCCCEEEEEECCSSSCGGGTTEEEEEETTT------------------------------------TEEEEEE
T ss_pred CEeecCCCCcCCcceEEECCCCCcccCCcEEEEEcCC------------------------------------CEEEEEE
Confidence 0 100 11224788887 4678999986532 2466666
Q ss_pred CC-CCeEE--EEEECCCCCcccceeEEEEE-CCEEEEEecC-CC---------eEEEEeCCC
Q 018705 296 GN-DGKII--RDFNDPDATYISFVTSAAEF-DGNLYLASLQ-SN---------FIGILPLDG 343 (351)
Q Consensus 296 ~~-~g~~~--~~~~~~~g~~~~~~~~~~~~-~g~L~ig~~~-~~---------~i~~~~~~~ 343 (351)
.+ +|+.. +.+-. +. ...+..+... +|.||+.+.. .+ +|+|+...+
T Consensus 294 ~~~~g~~~~~~~~~~--~~-~~rp~~v~~~pDG~lyv~~~~~~G~g~~~~~~g~i~ri~~~g 352 (354)
T 3a9g_A 294 FGDNMEVRKISTFFK--NV-FGRLRDVVIDDDGGILISTSNRDGRGSLRAGDDKILKIVSEQ 352 (354)
T ss_dssp ECGGGCEEEEEEECT--TT-SCCEEEEEECTTSCEEEEECTTSSSSCCCTTCSCEEEEEETT
T ss_pred ECCCCcccceeeecc--CC-CCCeeEEEECCCCcEEEEEeCCCCCcCCCCCCCEEEEEecCC
Confidence 51 34443 22321 11 2346677765 5799999973 33 899987544
No 40
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=99.68 E-value=5.8e-14 Score=128.64 Aligned_cols=221 Identities=13% Similarity=0.106 Sum_probs=153.0
Q ss_pred eEEEEEcCCEEEEEEcCCCeEEEEeecCCccccceEEcC-CCCEEEEeCCC-CeEEEcC-C----C-eEEe-cCCCCCcc
Q 018705 65 ALYTATRDGWVKYFILHNETLVNWKHIDSQSLLGLTTTK-DGGVILCDNEK-GLLKVTE-E----G-VEAI-VPDASFTN 135 (351)
Q Consensus 65 ~lyv~~~~g~I~~~d~~~g~~~~~~~~~~~p~~gl~~d~-~G~L~v~d~~~-gl~~~~~-~----g-~~~l-~~~~~~~n 135 (351)
.|+++..+ .|.+++..+++.........+|. ++++|+ +++||++|... .|++++. . . .+.+ ......|.
T Consensus 3 ~ll~~~~~-~I~~i~~~~~~~~~~~~~~~~p~-g~~~d~~~~~ly~~D~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~ 80 (316)
T 1ijq_A 3 YLFFTNRH-EVRKMTLDRSEYTSLIPNLRNVV-ALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPD 80 (316)
T ss_dssp EEEEECBS-SEEEEETTSCCCEEEECSCSSEE-EEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCCC
T ss_pred EEEEECCC-eEEEEECCCcceEehhcCCCceE-EEEEEeCCCEEEEEECCCCcEEEEECCCCCCCcccEEEEeCCCCCcC
Confidence 35555554 49999997766655555567899 999996 56899999764 5777774 3 2 3333 33346899
Q ss_pred cEEEcc-CCcEEEEeCCCccCCcccccccccccCCceEEEEeCCCCeEEEee-cCccccceEEEcCCCCEEEEEecce--
Q 018705 136 DVIAAS-DGTLYFTVASTKYTPTDFYKDMAEGKPYGQLRKYDPKLKETTVLH-EGFYFANGIALSKNEDFVVVCESWK-- 211 (351)
Q Consensus 136 ~l~~d~-dG~ly~t~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~~~~~~~~-~~~~~~ngi~~~~dg~~lyv~~~~~-- 211 (351)
++++|+ +|+||+++.. .++|.++++++...+.+. ..+..|++|+++|++..||+++...
T Consensus 81 glavd~~~~~ly~~d~~-----------------~~~I~~~~~~g~~~~~~~~~~~~~P~~iavdp~~g~ly~~d~~~~~ 143 (316)
T 1ijq_A 81 GLAVDWIHSNIYWTDSV-----------------LGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPA 143 (316)
T ss_dssp EEEEETTTTEEEEEETT-----------------TTEEEEEETTSSSEEEEEECTTCCEEEEEEETTTTEEEEEECSSSC
T ss_pred EEEEeecCCeEEEEECC-----------------CCEEEEEeCCCCceEEEEECCCCCcceEEeCCCCCEEEEEccCCCC
Confidence 999996 6789999975 468999998765555544 4678999999999777899999753
Q ss_pred eEEeecCCCCceeEEeccCCCCCCceEECC-CCCEEEEEecCCchhhhhhhcChhHHHHHHhccchhhcccCCCCCCceE
Q 018705 212 RYWLKGDRAGILDAFIENLPGGPDNINLAP-DGSFWIGLIKMNQTGVRAIQKCREKWELLDAYPGLISLLLPMGSDAGAR 290 (351)
Q Consensus 212 ~~~i~~~~~~~~~~~~~~~~g~pd~i~~d~-~G~lwva~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 290 (351)
+++..+......+.+....-..|.++++|+ +++||++... ...
T Consensus 144 ~I~~~~~dG~~~~~~~~~~~~~P~gla~d~~~~~lY~~D~~------------------------------------~~~ 187 (316)
T 1ijq_A 144 KIKKGGLNGVDIYSLVTENIQWPNGITLDLLSGRLYWVDSK------------------------------------LHS 187 (316)
T ss_dssp EEEEEETTSCCEEEEECSSCSCEEEEEEETTTTEEEEEETT------------------------------------TTE
T ss_pred eEEEEcCCCCCeEEEEECCCCCceEEEEeccCCEEEEEECC------------------------------------CCe
Confidence 444432221223333322224699999996 5689998743 136
Q ss_pred EEEEECCCCeEEEEEECCCCCcccceeEEEEECCEEEEEecCCCeEEEEeCC
Q 018705 291 VVKVDGNDGKIIRDFNDPDATYISFVTSAAEFDGNLYLASLQSNFIGILPLD 342 (351)
Q Consensus 291 v~~~~~~~g~~~~~~~~~~g~~~~~~~~~~~~~g~L~ig~~~~~~i~~~~~~ 342 (351)
|.++|. +|+..+.+....+ ....+.++..++++||+....+++|.+++..
T Consensus 188 I~~~d~-dg~~~~~~~~~~~-~~~~P~giav~~~~ly~~d~~~~~V~~~~~~ 237 (316)
T 1ijq_A 188 ISSIDV-NGGNRKTILEDEK-RLAHPFSLAVFEDKVFWTDIINEAIFSANRL 237 (316)
T ss_dssp EEEEET-TSCSCEEEEECTT-TTSSEEEEEEETTEEEEEETTTTEEEEEETT
T ss_pred EEEEec-CCCceEEEeecCC-ccCCcEEEEEECCEEEEEECCCCeEEEEeCC
Confidence 889999 8865544432111 1334667777889999999999999999863
No 41
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=99.66 E-value=1.8e-14 Score=131.98 Aligned_cols=178 Identities=15% Similarity=0.081 Sum_probs=124.6
Q ss_pred CCCceEEEeeCCCeEEEEEcCCEEEEEEcCCCeEEEEee-----cCCccccceEEcC-CCCEEEEeCC------------
Q 018705 52 NHPEDVSVVVSKGALYTATRDGWVKYFILHNETLVNWKH-----IDSQSLLGLTTTK-DGGVILCDNE------------ 113 (351)
Q Consensus 52 ~~pe~i~~d~~~g~lyv~~~~g~I~~~d~~~g~~~~~~~-----~~~~p~~gl~~d~-~G~L~v~d~~------------ 113 (351)
..|.+|+++++++.||++...++|+++|+++++++.+.. ....|+ ++++|+ +|+||+++..
T Consensus 80 ~~p~gi~~~~~~g~l~v~d~~~~i~~~d~~~g~~~~~~~~~~~~~~~~p~-~i~~d~~~G~l~v~d~~~~~~~~~~~~~~ 158 (322)
T 2fp8_A 80 GRTYDISYNLQNNQLYIVDCYYHLSVVGSEGGHATQLATSVDGVPFKWLY-AVTVDQRTGIVYFTDVSTLYDDRGVQQIM 158 (322)
T ss_dssp CCEEEEEEETTTTEEEEEETTTEEEEECTTCEECEEEESEETTEECSCEE-EEEECTTTCCEEEEESCSSCCTTCHHHHH
T ss_pred CCCceEEEcCCCCcEEEEECCCCEEEEeCCCCEEEEecccCCCCcccccc-eEEEecCCCEEEEECCcccccccccceeh
Confidence 368899999547999999887889999987676655532 124688 999999 9999999864
Q ss_pred ------CCeEEEcC-CC-eEEecCCCCCcccEEEccCCc-EEEEeCCCccCCcccccccccccCCceEEEEeCCC---Ce
Q 018705 114 ------KGLLKVTE-EG-VEAIVPDASFTNDVIAASDGT-LYFTVASTKYTPTDFYKDMAEGKPYGQLRKYDPKL---KE 181 (351)
Q Consensus 114 ------~gl~~~~~-~g-~~~l~~~~~~~n~l~~d~dG~-ly~t~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~---~~ 181 (351)
.+++++++ ++ .+.+......||+|++++||+ +|++++. .++|++|+.++ ++
T Consensus 159 ~~~~~~g~v~~~d~~~~~~~~~~~~~~~p~gia~~~dg~~lyv~d~~-----------------~~~I~~~~~~~~~~~~ 221 (322)
T 2fp8_A 159 DTSDKTGRLIKYDPSTKETTLLLKELHVPGGAEVSADSSFVLVAEFL-----------------SHQIVKYWLEGPKKGT 221 (322)
T ss_dssp HHTCCCEEEEEEETTTTEEEEEEEEESCCCEEEECTTSSEEEEEEGG-----------------GTEEEEEESSSTTTTC
T ss_pred cccCCCceEEEEeCCCCEEEEeccCCccCcceEECCCCCEEEEEeCC-----------------CCeEEEEECCCCcCCc
Confidence 35888886 46 555544457899999999985 9999875 35899998764 34
Q ss_pred EEEeecCccccceEEEcCCCCEEEEEecc----------e-eEEeecCCCCc-eeEEecc--C-CCCCCceEECCCCCEE
Q 018705 182 TTVLHEGFYFANGIALSKNEDFVVVCESW----------K-RYWLKGDRAGI-LDAFIEN--L-PGGPDNINLAPDGSFW 246 (351)
Q Consensus 182 ~~~~~~~~~~~ngi~~~~dg~~lyv~~~~----------~-~~~i~~~~~~~-~~~~~~~--~-~g~pd~i~~d~~G~lw 246 (351)
.+.+.. ...|+||+++++|+ ||+++.. . ++..-++. ++ .+.+... . ...+.+++. .+|+||
T Consensus 222 ~~~~~~-~~gP~gi~~d~~G~-l~va~~~~~~~~~~~~~~~~v~~~d~~-G~~~~~~~~~~g~~~~~~~~~~~-~~g~L~ 297 (322)
T 2fp8_A 222 AEVLVK-IPNPGNIKRNADGH-FWVSSSEELDGNMHGRVDPKGIKFDEF-GNILEVIPLPPPFAGEHFEQIQE-HDGLLY 297 (322)
T ss_dssp EEEEEE-CSSEEEEEECTTSC-EEEEEEEETTSSTTSCEEEEEEEECTT-SCEEEEEECCTTTTTSCCCEEEE-ETTEEE
T ss_pred cceEEe-CCCCCCeEECCCCC-EEEEecCcccccccCCCccEEEEECCC-CCEEEEEECCCCCccccceEEEE-eCCEEE
Confidence 444433 22399999999998 9998865 2 33333332 33 2333221 1 123556666 478999
Q ss_pred EEEec
Q 018705 247 IGLIK 251 (351)
Q Consensus 247 va~~~ 251 (351)
|+...
T Consensus 298 v~~~~ 302 (322)
T 2fp8_A 298 IGTLF 302 (322)
T ss_dssp EECSS
T ss_pred EeecC
Confidence 99643
No 42
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=99.64 E-value=1.3e-13 Score=130.58 Aligned_cols=222 Identities=13% Similarity=0.114 Sum_probs=155.1
Q ss_pred CCeEEEEEcCCEEEEEEcCCCeEEEEeecCCccccceEEcC-CCCEEEEeCCCC-eEEEcCCC------eEEe-cCCCCC
Q 018705 63 KGALYTATRDGWVKYFILHNETLVNWKHIDSQSLLGLTTTK-DGGVILCDNEKG-LLKVTEEG------VEAI-VPDASF 133 (351)
Q Consensus 63 ~g~lyv~~~~g~I~~~d~~~g~~~~~~~~~~~p~~gl~~d~-~G~L~v~d~~~g-l~~~~~~g------~~~l-~~~~~~ 133 (351)
...|+++.. ..|.+++..+.....+......|. +|++|+ +++||++|...+ |++++.+| .+.+ ......
T Consensus 83 ~~~ll~~~~-~~I~~i~l~~~~~~~~~~~~~~~~-~l~~d~~~~~lywsD~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~ 160 (400)
T 3p5b_L 83 IAYLFFTNR-HEVRKMTLDRSEYTSLIPNLRNVV-ALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQA 160 (400)
T ss_dssp SCEEEEEET-TEEEEECTTSCSCEEEECSCSCEE-EEEEETTTTEEEEEETTTTEEEEEEC------CCCEEEECSSCSC
T ss_pred cceeEEecc-ceeEEEccCCcceeEeccccCcce-EEeeeeccCceEEEecCCCeEEEEEcccCCCCCcceEEEeCCCCC
Confidence 345555554 579999986666655555567899 999995 678999997654 66666432 2333 334478
Q ss_pred cccEEEcc-CCcEEEEeCCCccCCcccccccccccCCceEEEEeCCCCeEEEee-cCccccceEEEcCCCCEEEEEecce
Q 018705 134 TNDVIAAS-DGTLYFTVASTKYTPTDFYKDMAEGKPYGQLRKYDPKLKETTVLH-EGFYFANGIALSKNEDFVVVCESWK 211 (351)
Q Consensus 134 ~n~l~~d~-dG~ly~t~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~~~~~~~~-~~~~~~ngi~~~~dg~~lyv~~~~~ 211 (351)
|.+|++|+ .|+||++|.. .++|.+++++++..+.+. ..+..|+||+++|.+..||+++...
T Consensus 161 p~glavD~~~~~lY~~d~~-----------------~~~I~~~~~~g~~~~~l~~~~~~~P~~iavdp~~g~ly~td~~~ 223 (400)
T 3p5b_L 161 PDGLAVDWIHSNIYWTDSV-----------------LGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGT 223 (400)
T ss_dssp EEEEEEETTTTEEEEEETT-----------------TTEEEEECTTTCSEEEEEECSSCCEEEEEEETTTTEEEEEECSS
T ss_pred cccEEEEecCCceEEEECC-----------------CCeEEEEeCCCCceEEEEeCCCCCcceEEEecccCeEEEEeCCC
Confidence 99999998 6799999976 468999998866555544 4678899999999777899999753
Q ss_pred --eEEeecCCCCceeEEeccCCCCCCceEECC-CCCEEEEEecCCchhhhhhhcChhHHHHHHhccchhhcccCCCCCCc
Q 018705 212 --RYWLKGDRAGILDAFIENLPGGPDNINLAP-DGSFWIGLIKMNQTGVRAIQKCREKWELLDAYPGLISLLLPMGSDAG 288 (351)
Q Consensus 212 --~~~i~~~~~~~~~~~~~~~~g~pd~i~~d~-~G~lwva~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 288 (351)
+++..+......+.+....-..|.||++|. +++||++... .
T Consensus 224 ~~~I~~~~~dG~~~~~~~~~~l~~P~glavd~~~~~lY~aD~~------------------------------------~ 267 (400)
T 3p5b_L 224 PAKIKKGGLNGVDIYSLVTENIQWPNGITLDLLSGRLYWVDSK------------------------------------L 267 (400)
T ss_dssp SCCEEEEETTSCSCEEEECSSCSCEEEEEEETTTTEEEEEETT------------------------------------T
T ss_pred CCEEEEEeCCCCccEEEEECCCCceEEEEEEeCCCEEEEEECC------------------------------------C
Confidence 555443222223333322224699999995 5689998643 1
Q ss_pred eEEEEEECCCCeEEEEEECCCCCcccceeEEEEECCEEEEEecCCCeEEEEeC
Q 018705 289 ARVVKVDGNDGKIIRDFNDPDATYISFVTSAAEFDGNLYLASLQSNFIGILPL 341 (351)
Q Consensus 289 ~~v~~~~~~~g~~~~~~~~~~g~~~~~~~~~~~~~g~L~ig~~~~~~i~~~~~ 341 (351)
..|.++|. +|.....+....+. .....++..+++.||+....+..|.+++.
T Consensus 268 ~~I~~~d~-dG~~~~~~~~~~~~-l~~P~gl~v~~~~lywtd~~~~~V~~~~~ 318 (400)
T 3p5b_L 268 HSISSIDV-NGGNRKTILEDEKR-LAHPFSLAVFEDKVFWTDIINEAIFSANR 318 (400)
T ss_dssp TEEEEEET-TSCCCEEEEECSST-TSSEEEEEEETTEEEEEESSSCSEEEEES
T ss_pred CEEEEEeC-CCCccEEEEeCCCC-CCCCEEEEEeCCEEEEecCCCCeEEEEEc
Confidence 36889999 88655554332111 34456777789999999999999999984
No 43
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=99.64 E-value=7e-14 Score=128.63 Aligned_cols=229 Identities=7% Similarity=-0.011 Sum_probs=156.6
Q ss_pred CCCceEEEeeCCCeEEEEEc-CCEEEEEEcCCCeEEEEeecCCccccceEEcCCCCEEEEe-CCCCeEEEcC-CC-e-EE
Q 018705 52 NHPEDVSVVVSKGALYTATR-DGWVKYFILHNETLVNWKHIDSQSLLGLTTTKDGGVILCD-NEKGLLKVTE-EG-V-EA 126 (351)
Q Consensus 52 ~~pe~i~~d~~~g~lyv~~~-~g~I~~~d~~~g~~~~~~~~~~~p~~gl~~d~~G~L~v~d-~~~gl~~~~~-~g-~-~~ 126 (351)
..|++++++ ++.+|+... ++.|..+|.++++...-......|. +++++++|+||+++ ..+.+..++. ++ + ..
T Consensus 44 ~~~~~i~~~--~~~lyv~~~~~~~v~viD~~t~~~~~~i~~~~~p~-~i~~~~~g~lyv~~~~~~~v~~iD~~t~~~~~~ 120 (328)
T 3dsm_A 44 DVAQSMVIR--DGIGWIVVNNSHVIFAIDINTFKEVGRITGFTSPR-YIHFLSDEKAYVTQIWDYRIFIINPKTYEITGY 120 (328)
T ss_dssp SCEEEEEEE--TTEEEEEEGGGTEEEEEETTTCCEEEEEECCSSEE-EEEEEETTEEEEEEBSCSEEEEEETTTTEEEEE
T ss_pred ccceEEEEE--CCEEEEEEcCCCEEEEEECcccEEEEEcCCCCCCc-EEEEeCCCeEEEEECCCCeEEEEECCCCeEEEE
Confidence 357899986 688888765 6889999998887743224457799 99998889999999 5567888885 55 3 33
Q ss_pred ecCCC-----CCcccEEEccCCcEEEEeCCCccCCcccccccccccCCceEEEEeCCCCeEEEeecCccccceEEEcCCC
Q 018705 127 IVPDA-----SFTNDVIAASDGTLYFTVASTKYTPTDFYKDMAEGKPYGQLRKYDPKLKETTVLHEGFYFANGIALSKNE 201 (351)
Q Consensus 127 l~~~~-----~~~n~l~~d~dG~ly~t~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~~~~~~~~~~~~~~ngi~~~~dg 201 (351)
+.... ..|.++++ .++++|+++.. ..+.|.++|++++++.........|++++++++|
T Consensus 121 i~~g~~~~~~~~p~~i~~-~~~~lyv~~~~----------------~~~~v~viD~~t~~~~~~i~~g~~p~~i~~~~dG 183 (328)
T 3dsm_A 121 IECPDMDMESGSTEQMVQ-YGKYVYVNCWS----------------YQNRILKIDTETDKVVDELTIGIQPTSLVMDKYN 183 (328)
T ss_dssp EECTTCCTTTCBCCCEEE-ETTEEEEEECT----------------TCCEEEEEETTTTEEEEEEECSSCBCCCEECTTS
T ss_pred EEcCCccccCCCcceEEE-ECCEEEEEcCC----------------CCCEEEEEECCCCeEEEEEEcCCCccceEEcCCC
Confidence 43321 27999999 67899999752 0358999999988876555555679999999999
Q ss_pred CEEEEEecc-----------eeEEeecCCCCceeEEeccCC--CCCCceEECCCCC-EEEEEecCCchhhhhhhcChhHH
Q 018705 202 DFVVVCESW-----------KRYWLKGDRAGILDAFIENLP--GGPDNINLAPDGS-FWIGLIKMNQTGVRAIQKCREKW 267 (351)
Q Consensus 202 ~~lyv~~~~-----------~~~~i~~~~~~~~~~~~~~~~--g~pd~i~~d~~G~-lwva~~~~~~~~~~~~~~~~~~~ 267 (351)
+ +|++... +.+.+-+...++..... ..+ ..|.+++++++|+ +|++..
T Consensus 184 ~-l~v~~~~~~~~~~~~~~~~~v~~id~~t~~v~~~~-~~~~g~~p~~la~~~d~~~lyv~~~----------------- 244 (328)
T 3dsm_A 184 K-MWTITDGGYEGSPYGYEAPSLYRIDAETFTVEKQF-KFKLGDWPSEVQLNGTRDTLYWINN----------------- 244 (328)
T ss_dssp E-EEEEBCCBCTTCSSCBCCCEEEEEETTTTEEEEEE-ECCTTCCCEEEEECTTSCEEEEESS-----------------
T ss_pred C-EEEEECCCccCCccccCCceEEEEECCCCeEEEEE-ecCCCCCceeEEEecCCCEEEEEcc-----------------
Confidence 7 8887653 33333233334432222 122 2689999998764 888732
Q ss_pred HHHHhccchhhcccCCCCCCceEEEEEECCCCeEEEEEECCCCCcccceeEEEEE--CCEEEEEe----cCCCeEEEEeC
Q 018705 268 ELLDAYPGLISLLLPMGSDAGARVVKVDGNDGKIIRDFNDPDATYISFVTSAAEF--DGNLYLAS----LQSNFIGILPL 341 (351)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~g~~~~~~~~~~g~~~~~~~~~~~~--~g~L~ig~----~~~~~i~~~~~ 341 (351)
.|.++|++++++...-..+.+ ...+.++..+ +++||++. ..++.|.+++.
T Consensus 245 ----------------------~v~~~d~~t~~~~~~~~~~~~--~~~p~gi~vdp~~g~lyva~~~~y~~~~~V~v~d~ 300 (328)
T 3dsm_A 245 ----------------------DIWRMPVEADRVPVRPFLEFR--DTKYYGLTVNPNNGEVYVADAIDYQQQGIVYRYSP 300 (328)
T ss_dssp ----------------------SEEEEETTCSSCCSSCSBCCC--SSCEEEEEECTTTCCEEEEECTTSSSEEEEEEECT
T ss_pred ----------------------EEEEEECCCCceeeeeeecCC--CCceEEEEEcCCCCeEEEEcccccccCCEEEEECC
Confidence 377889855554210001111 2346666654 68999998 67889999997
Q ss_pred CC
Q 018705 342 DG 343 (351)
Q Consensus 342 ~~ 343 (351)
.+
T Consensus 301 ~g 302 (328)
T 3dsm_A 301 QG 302 (328)
T ss_dssp TC
T ss_pred CC
Confidence 63
No 44
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=99.64 E-value=3.3e-14 Score=134.59 Aligned_cols=182 Identities=14% Similarity=0.121 Sum_probs=127.0
Q ss_pred cCCCceEEEeeCCCeEEEE-EcCCEEEEEEcCCC----eEEEE-eecCCccccceEEcC-CCCEEEEeCCCC-eEEEcCC
Q 018705 51 VNHPEDVSVVVSKGALYTA-TRDGWVKYFILHNE----TLVNW-KHIDSQSLLGLTTTK-DGGVILCDNEKG-LLKVTEE 122 (351)
Q Consensus 51 ~~~pe~i~~d~~~g~lyv~-~~~g~I~~~d~~~g----~~~~~-~~~~~~p~~gl~~d~-~G~L~v~d~~~g-l~~~~~~ 122 (351)
+..|.++++|+.++.||.. ..+++|++++..+. ..+.+ ......|. ||++|. .++||++|...+ +.+++.+
T Consensus 111 ~~~~~~l~~d~~~~~lywsD~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~-glavD~~~~~lY~~d~~~~~I~~~~~~ 189 (400)
T 3p5b_L 111 LRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPD-GLAVDWIHSNIYWTDSVLGTVSVADTK 189 (400)
T ss_dssp CSCEEEEEEETTTTEEEEEETTTTEEEEEEC------CCCEEEECSSCSCEE-EEEEETTTTEEEEEETTTTEEEEECTT
T ss_pred cCcceEEeeeeccCceEEEecCCCeEEEEEcccCCCCCcceEEEeCCCCCcc-cEEEEecCCceEEEECCCCeEEEEeCC
Confidence 6789999999777877654 56789999998542 22333 22446799 999997 779999998765 5555566
Q ss_pred C--eEEec-CCCCCcccEEEcc-CCcEEEEeCCCccCCcccccccccccCCceEEEEeCCCCeEEEe-ecCccccceEEE
Q 018705 123 G--VEAIV-PDASFTNDVIAAS-DGTLYFTVASTKYTPTDFYKDMAEGKPYGQLRKYDPKLKETTVL-HEGFYFANGIAL 197 (351)
Q Consensus 123 g--~~~l~-~~~~~~n~l~~d~-dG~ly~t~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~~~~~~~-~~~~~~~ngi~~ 197 (351)
| .+.+. .....|++|++|| +|.||+++... .++|+++++++...+.+ ...+..|+||++
T Consensus 190 g~~~~~l~~~~~~~P~~iavdp~~g~ly~td~~~----------------~~~I~~~~~dG~~~~~~~~~~l~~P~glav 253 (400)
T 3p5b_L 190 GVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGT----------------PAKIKKGGLNGVDIYSLVTENIQWPNGITL 253 (400)
T ss_dssp TCSEEEEEECSSCCEEEEEEETTTTEEEEEECSS----------------SCCEEEEETTSCSCEEEECSSCSCEEEEEE
T ss_pred CCceEEEEeCCCCCcceEEEecccCeEEEEeCCC----------------CCEEEEEeCCCCccEEEEECCCCceEEEEE
Confidence 6 44443 3447899999998 57899999641 25799999876554444 456789999999
Q ss_pred cCCCCEEEEEecce-eEEeecCCCCceeEEecc--CCCCCCceEECCCCCEEEEEe
Q 018705 198 SKNEDFVVVCESWK-RYWLKGDRAGILDAFIEN--LPGGPDNINLAPDGSFWIGLI 250 (351)
Q Consensus 198 ~~dg~~lyv~~~~~-~~~i~~~~~~~~~~~~~~--~~g~pd~i~~d~~G~lwva~~ 250 (351)
+++++.||++++.. +++..+......+.+... .-..|.+++++. +++|++..
T Consensus 254 d~~~~~lY~aD~~~~~I~~~d~dG~~~~~~~~~~~~l~~P~gl~v~~-~~lywtd~ 308 (400)
T 3p5b_L 254 DLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVFE-DKVFWTDI 308 (400)
T ss_dssp ETTTTEEEEEETTTTEEEEEETTSCCCEEEEECSSTTSSEEEEEEET-TEEEEEES
T ss_pred EeCCCEEEEEECCCCEEEEEeCCCCccEEEEeCCCCCCCCEEEEEeC-CEEEEecC
Confidence 99888999999876 555543322333444332 224688999964 56777764
No 45
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=99.64 E-value=5.9e-14 Score=126.56 Aligned_cols=176 Identities=13% Similarity=0.158 Sum_probs=124.0
Q ss_pred cCCCceEEEeeCCCeEEEEEc-CCEEEEEEcCCCeEEEEee-----cCCccccceEEcCCCCEEEEeC------------
Q 018705 51 VNHPEDVSVVVSKGALYTATR-DGWVKYFILHNETLVNWKH-----IDSQSLLGLTTTKDGGVILCDN------------ 112 (351)
Q Consensus 51 ~~~pe~i~~d~~~g~lyv~~~-~g~I~~~d~~~g~~~~~~~-----~~~~p~~gl~~d~~G~L~v~d~------------ 112 (351)
...|.+++++ .+|.+|++.. +++|+++|+++|+++.+.. ....|+ ++++|++|++|+++.
T Consensus 68 ~~~~~~l~~~-~dg~l~v~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~-~i~~d~~G~l~vtd~~~g~~~~~~~~~ 145 (296)
T 3e5z_A 68 SHHQNGHCLN-KQGHLIACSHGLRRLERQREPGGEWESIADSFEGKKLNSPN-DVCLAPDGSLWFSDPTYGIDKPEEGYG 145 (296)
T ss_dssp CSSEEEEEEC-TTCCEEEEETTTTEEEEECSTTCCEEEEECEETTEECCCCC-CEEECTTSCEEEEECSHHHHCGGGSSC
T ss_pred CCCcceeeEC-CCCcEEEEecCCCeEEEEcCCCCcEEEEeeccCCCCCCCCC-CEEECCCCCEEEECCcccccccccccc
Confidence 3568899999 4677888775 5789999998888765532 124578 999999999999864
Q ss_pred ------CCCeEEEcCCC-eEEecCCCCCcccEEEccCCcEEEEeCCCccCCcccccccccccCCceEEEEeCC-CCeE--
Q 018705 113 ------EKGLLKVTEEG-VEAIVPDASFTNDVIAASDGTLYFTVASTKYTPTDFYKDMAEGKPYGQLRKYDPK-LKET-- 182 (351)
Q Consensus 113 ------~~gl~~~~~~g-~~~l~~~~~~~n~l~~d~dG~ly~t~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~-~~~~-- 182 (351)
..++++++++| .+.+......|+++++++||+++++++. .++|++|+.+ ++++
T Consensus 146 ~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~gi~~s~dg~~lv~~~~-----------------~~~i~~~~~~~~g~~~~ 208 (296)
T 3e5z_A 146 GEMELPGRWVFRLAPDGTLSAPIRDRVKPNGLAFLPSGNLLVSDTG-----------------DNATHRYCLNARGETEY 208 (296)
T ss_dssp CCCCSSSCEEEEECTTSCEEEEECCCSSEEEEEECTTSCEEEEETT-----------------TTEEEEEEECSSSCEEE
T ss_pred ccccCCCcEEEEECCCCCEEEeecCCCCCccEEECCCCCEEEEeCC-----------------CCeEEEEEECCCCcCcC
Confidence 23788888768 6666555578999999999987788764 4578888864 4544
Q ss_pred --EEeecCccccceEEEcCCCCEEEEEecceeEEeecCCCCc-eeEEeccCCCCCCceEE-CCCC-CEEEEEe
Q 018705 183 --TVLHEGFYFANGIALSKNEDFVVVCESWKRYWLKGDRAGI-LDAFIENLPGGPDNINL-APDG-SFWIGLI 250 (351)
Q Consensus 183 --~~~~~~~~~~ngi~~~~dg~~lyv~~~~~~~~i~~~~~~~-~~~~~~~~~g~pd~i~~-d~~G-~lwva~~ 250 (351)
+.+......|+||+++++|+ +|++. .+.+.+-++. ++ ...+. .+..|.++++ +++| .||+++.
T Consensus 209 ~~~~~~~~~~~p~~i~~d~~G~-l~v~~-~~~v~~~~~~-g~~~~~~~--~~~~~~~~~f~~~d~~~L~v~t~ 276 (296)
T 3e5z_A 209 QGVHFTVEPGKTDGLRVDAGGL-IWASA-GDGVHVLTPD-GDELGRVL--TPQTTSNLCFGGPEGRTLYMTVS 276 (296)
T ss_dssp EEEEECCSSSCCCSEEEBTTSC-EEEEE-TTEEEEECTT-SCEEEEEE--CSSCCCEEEEESTTSCEEEEEET
T ss_pred CCeEeeCCCCCCCeEEECCCCC-EEEEc-CCeEEEECCC-CCEEEEEE--CCCCceeEEEECCCCCEEEEEcC
Confidence 22222345789999999998 99988 4433333333 33 23332 2222788888 4666 4999864
No 46
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=99.63 E-value=5.4e-14 Score=130.85 Aligned_cols=160 Identities=18% Similarity=0.245 Sum_probs=112.8
Q ss_pred CceEecCCCcCCCceEEEeeCCCeEEEEEcCCEEEEEEcCCCeEEEEee------cCCccccceEEcCC----CCEEEEe
Q 018705 42 GLTKLGEGCVNHPEDVSVVVSKGALYTATRDGWVKYFILHNETLVNWKH------IDSQSLLGLTTTKD----GGVILCD 111 (351)
Q Consensus 42 ~~~~i~~~~~~~pe~i~~d~~~g~lyv~~~~g~I~~~d~~~g~~~~~~~------~~~~p~~gl~~d~~----G~L~v~d 111 (351)
.++.++.+ +..|++++++ .+|.+|++...|+|++++ +++.+.+.. ....|+ ||+++++ +.|||++
T Consensus 22 ~~~~va~~-l~~P~~ia~~-pdG~l~V~e~~g~I~~i~--~g~~~~~~~~~v~~~g~~~p~-gia~~pdf~~~g~lYv~~ 96 (352)
T 2ism_A 22 RVEEVVGG-LEVPWALAFL-PDGGMLIAERPGRIRLFR--EGRLSTYAELSVYHRGESGLL-GLALHPRFPQEPYVYAYR 96 (352)
T ss_dssp CEEEEECC-CSCEEEEEEC-TTSCEEEEETTTEEEEEE--TTEEEEEEECCCCCSTTCSEE-EEEECTTTTTSCEEEEEE
T ss_pred EEEEEECC-CCCceEEEEc-CCCeEEEEeCCCeEEEEE--CCCccEeecceEeecCCCCce-eEEECCCCCCCCEEEEEE
Confidence 45667776 7899999999 467799999899999998 565544322 235689 9999997 7899998
Q ss_pred CC------CCeEEEcCC-C-e---EE----ec--CC-CCCcccEEEccCCcEEEEeCCCccCCcccccccccccCCceEE
Q 018705 112 NE------KGLLKVTEE-G-V---EA----IV--PD-ASFTNDVIAASDGTLYFTVASTKYTPTDFYKDMAEGKPYGQLR 173 (351)
Q Consensus 112 ~~------~gl~~~~~~-g-~---~~----l~--~~-~~~~n~l~~d~dG~ly~t~~~~~~~~~~~~~~~~~~~~~g~l~ 173 (351)
.. ..+++++.+ + . +. +. .. ...+++|++++||.||+++..... . ....+ .....|+|+
T Consensus 97 ~~~~~~~~~~v~r~~~~~~~~~~~~~l~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~G~~~~-~-~~~~d--~~~~~g~I~ 172 (352)
T 2ism_A 97 TVAEGGLRNQVVRLRHLGERGVLDRVVLDGIPARPHGLHSGGRIAFGPDGMLYVTTGEVYE-R-ELAQD--LASLGGKIL 172 (352)
T ss_dssp EECTTSSEEEEEEEEECSSCEEEEEEEEEEECCCTTCCCCCCCEEECTTSCEEEECCCTTC-G-GGGGC--TTCSSSEEE
T ss_pred ecCCCCCccEEEEEEeCCCCcCceEEEEEeCCCCCCCCcCCceEEECCCCCEEEEECCCCC-C-ccccC--CCCCceEEE
Confidence 63 467787742 2 1 22 22 11 257899999999999999854210 0 00000 112357899
Q ss_pred EEeCCC-------------CeEEEeecCccccceEEEcC-CCCEEEEEecce
Q 018705 174 KYDPKL-------------KETTVLHEGFYFANGIALSK-NEDFVVVCESWK 211 (351)
Q Consensus 174 ~~d~~~-------------~~~~~~~~~~~~~ngi~~~~-dg~~lyv~~~~~ 211 (351)
++++++ .+.+.+..++.+|+|+++++ +|+ ||+++...
T Consensus 173 ri~~dG~~p~~npf~~~~~~~~~i~a~G~rnp~g~a~d~~~g~-l~v~d~g~ 223 (352)
T 2ism_A 173 RLTPEGEPAPGNPFLGRRGARPEVYSLGHRNPQGLAWHPKTGE-LFSSEHGP 223 (352)
T ss_dssp EECTTSSBCTTCTTTTCTTSCTTEEEECCSEECCCEECTTTCC-EEEEEECC
T ss_pred EEcCCCCCCCCCcccCCCCCCccEEEEcCCCcccEEEECCCCC-EEEEEcCC
Confidence 999874 24456677888999999999 555 99999765
No 47
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=99.63 E-value=2.3e-13 Score=138.75 Aligned_cols=228 Identities=14% Similarity=0.101 Sum_probs=159.2
Q ss_pred eEEEeeCCCeEEEEEcCCEEEEEEcCCCeEEEEeecCCccccceEEcC-CCCEEEEeCCCC-eEEEcCCC------eEEe
Q 018705 56 DVSVVVSKGALYTATRDGWVKYFILHNETLVNWKHIDSQSLLGLTTTK-DGGVILCDNEKG-LLKVTEEG------VEAI 127 (351)
Q Consensus 56 ~i~~d~~~g~lyv~~~~g~I~~~d~~~g~~~~~~~~~~~p~~gl~~d~-~G~L~v~d~~~g-l~~~~~~g------~~~l 127 (351)
+.+++ ....|+++... .|.+++...+....+......|. +|++|. +++||++|...+ |++++.+| .+.+
T Consensus 389 C~~~~-~~p~Ll~an~~-~Ir~i~l~~~~~~~l~~~~~~~~-gl~~d~~~~~lY~sD~~~~~I~~~~l~g~~~~~~~~~v 465 (791)
T 3m0c_C 389 CKAVG-SIAYLFFTNRH-EVRKMTLDRSEYTSLIPNLRNVV-ALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTV 465 (791)
T ss_dssp CEETT-SCCEEEEECBS-SEEEECTTSCCCEEEECSCSSEE-EEEEETTTTEEEEEETTTTEEEEEEC--------CEEE
T ss_pred eeecc-ccccccccccc-ceeEeeccCCcceeeecCCCceE-EEeecccCCeeEEeeccceeEEEEeccCCCCCcceeEE
Confidence 44444 34456665554 48899886666665555567788 999996 678999998765 56666432 2333
Q ss_pred -cCCCCCcccEEEccCC-cEEEEeCCCccCCcccccccccccCCceEEEEeCCCCeEEEee-cCccccceEEEcCCCCEE
Q 018705 128 -VPDASFTNDVIAASDG-TLYFTVASTKYTPTDFYKDMAEGKPYGQLRKYDPKLKETTVLH-EGFYFANGIALSKNEDFV 204 (351)
Q Consensus 128 -~~~~~~~n~l~~d~dG-~ly~t~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~~~~~~~~-~~~~~~ngi~~~~dg~~l 204 (351)
......|++|++|+.+ +||++|.. .++|.++++++...+.+. ..+..|+||++++.+..|
T Consensus 466 i~~~l~~P~GLAvD~~~~~LY~tD~~-----------------~~~I~v~~ldG~~~~~l~~~~l~~P~gIaVDp~~g~L 528 (791)
T 3m0c_C 466 ISRDIQAPDGLAVDWIHSNIYWTDSV-----------------LGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFM 528 (791)
T ss_dssp ECSSCSCCCEEEEETTTTEEEEEETT-----------------TTEEEEEETTSSSEEEEEECTTCCEEEEEEETTTTEE
T ss_pred EecCCCCcceeeeeecCCcEEEEecC-----------------CCeEEEEeCCCCeEEEEEeCCCCCcceEEEecCCCCE
Confidence 3345789999999865 89999976 468999998866655554 567889999999987789
Q ss_pred EEEecce--eEEeecCCCCceeEEeccCCCCCCceEEC-CCCCEEEEEecCCchhhhhhhcChhHHHHHHhccchhhccc
Q 018705 205 VVCESWK--RYWLKGDRAGILDAFIENLPGGPDNINLA-PDGSFWIGLIKMNQTGVRAIQKCREKWELLDAYPGLISLLL 281 (351)
Q Consensus 205 yv~~~~~--~~~i~~~~~~~~~~~~~~~~g~pd~i~~d-~~G~lwva~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 281 (351)
||++.+. +++..+........+....-..|.||++| .+|+||++...
T Consensus 529 YwtD~g~~~~I~~~~~dG~~~~~lv~~~l~~P~GLavD~~~~~LYwaD~~------------------------------ 578 (791)
T 3m0c_C 529 YWTDWGTPAKIKKGGLNGVDIYSLVTENIQWPNGITLDLLSGRLYWVDSK------------------------------ 578 (791)
T ss_dssp EEEECSSSCEEEEEETTSCCEEEEECSSCSCEEEEEEETTTTEEEEEETT------------------------------
T ss_pred EEecCCCCCeEEEEecCCCceEEEEeCCCCCceEEEEecCCCeEEEEeCC------------------------------
Confidence 9999764 66655432223334443222469999999 56789998643
Q ss_pred CCCCCCceEEEEEECCCCeEEEEEECCCCCcccceeEEEEECCEEEEEecCCCeEEEEeC
Q 018705 282 PMGSDAGARVVKVDGNDGKIIRDFNDPDATYISFVTSAAEFDGNLYLASLQSNFIGILPL 341 (351)
Q Consensus 282 ~~~~~~~~~v~~~~~~~g~~~~~~~~~~g~~~~~~~~~~~~~g~L~ig~~~~~~i~~~~~ 341 (351)
...|.+++. +|+....+....+ ......++...+++||++....+.|.+++.
T Consensus 579 ------~~~I~~~d~-dG~~~~~v~~~~~-~l~~P~glav~~~~lYwtD~~~~~I~~~dk 630 (791)
T 3m0c_C 579 ------LHSISSIDV-NGGNRKTILEDEK-RLAHPFSLAVFEDKVFWTDIINEAIFSANR 630 (791)
T ss_dssp ------TTEEEEEET-TSCSCEEEEECTT-TTSSEEEEEEETTEEEEEETTTTEEEEEET
T ss_pred ------CCcEEEEec-CCCceEEEecCCC-ccCCCCEEEEeCCEEEEEECCCCEEEEEeC
Confidence 135889999 8865555532222 234456777788999999999999999974
No 48
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=99.63 E-value=1.8e-13 Score=125.56 Aligned_cols=219 Identities=13% Similarity=0.038 Sum_probs=149.9
Q ss_pred eEEEEEcCCEEEEEEcCCCe--EEEEeecCCccccceEEcC-CCCEEEEeCCCC-eEEEcCCC--e--EEecCCCCCccc
Q 018705 65 ALYTATRDGWVKYFILHNET--LVNWKHIDSQSLLGLTTTK-DGGVILCDNEKG-LLKVTEEG--V--EAIVPDASFTND 136 (351)
Q Consensus 65 ~lyv~~~~g~I~~~d~~~g~--~~~~~~~~~~p~~gl~~d~-~G~L~v~d~~~g-l~~~~~~g--~--~~l~~~~~~~n~ 136 (351)
.|+++.. ..|.+++.+++. ..........+. ++.+|. +++||++|...+ |.+++.+| . ..+......|++
T Consensus 6 ~ll~~~~-~~I~~i~l~~~~~~~~~~~~~~~~~~-~ld~d~~~~~lyw~D~~~~~I~r~~~~g~~~~~~~~~~~l~~p~g 83 (318)
T 3sov_A 6 LLLYANR-RDLRLVDATNGKENATIVVGGLEDAA-AVDFVFSHGLIYWSDVSEEAIKRTEFNKTESVQNVVVSGLLSPDG 83 (318)
T ss_dssp EEEEECE-EEEEEEETTCTTSCCEEEEEEEEEEE-EEEEEGGGTEEEEEETTTTEEEEEETTSSSCCCEEEEECCSCCCE
T ss_pred EEEEEcc-CeEEEEECCCCceEEEEEecCCCccE-EEEEEeCCCEEEEEECCCCcEEEEEccCCCceEEEEcCCCCCccE
Confidence 4555443 469999986542 222223334677 899986 679999997754 66666544 2 233444478999
Q ss_pred EEEcc-CCcEEEEeCCCccCCcccccccccccCCceEEEEeCCCCeEEEee-cCccccceEEEcCCCCEEEEEecc-e-e
Q 018705 137 VIAAS-DGTLYFTVASTKYTPTDFYKDMAEGKPYGQLRKYDPKLKETTVLH-EGFYFANGIALSKNEDFVVVCESW-K-R 212 (351)
Q Consensus 137 l~~d~-dG~ly~t~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~~~~~~~~-~~~~~~ngi~~~~dg~~lyv~~~~-~-~ 212 (351)
+++|+ +|+||+++.. .++|.++++++...+.+. ..+..|+||+++|.+..||+++.. . +
T Consensus 84 lavd~~~g~ly~~d~~-----------------~~~I~~~~~dG~~~~~l~~~~~~~P~giavdp~~g~ly~td~~~~~~ 146 (318)
T 3sov_A 84 LACDWLGEKLYWTDSE-----------------TNRIEVSNLDGSLRKVLFWQELDQPRAIALDPSSGFMYWTDWGEVPK 146 (318)
T ss_dssp EEEETTTTEEEEEETT-----------------TTEEEEEETTSCSCEEEECSSCSSEEEEEEEGGGTEEEEEECSSSCE
T ss_pred EEEEcCCCeEEEEECC-----------------CCEEEEEECCCCcEEEEEeCCCCCccEEEEeCCCCEEEEEecCCCCE
Confidence 99997 6799999975 468999998765544444 667899999999977789999965 2 5
Q ss_pred EEeecCCCCceeEEeccCCCCCCceEECC-CCCEEEEEecCCchhhhhhhcChhHHHHHHhccchhhcccCCCCCCceEE
Q 018705 213 YWLKGDRAGILDAFIENLPGGPDNINLAP-DGSFWIGLIKMNQTGVRAIQKCREKWELLDAYPGLISLLLPMGSDAGARV 291 (351)
Q Consensus 213 ~~i~~~~~~~~~~~~~~~~g~pd~i~~d~-~G~lwva~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 291 (351)
++..+......+.+....-..|.++++|+ +++||++... ...|
T Consensus 147 I~r~~~dG~~~~~~~~~~l~~Pnglavd~~~~~lY~aD~~------------------------------------~~~I 190 (318)
T 3sov_A 147 IERAGMDGSSRFIIINSEIYWPNGLTLDYEEQKLYWADAK------------------------------------LNFI 190 (318)
T ss_dssp EEEEETTSCSCEEEECSSCSCEEEEEEETTTTEEEEEETT------------------------------------TTEE
T ss_pred EEEEEcCCCCeEEEEECCCCCccEEEEeccCCEEEEEECC------------------------------------CCEE
Confidence 44433221222333322223689999996 5689999743 1368
Q ss_pred EEEECCCCeEEEEEECCCCCcccceeEEEEECCEEEEEecCCCeEEEEeCC
Q 018705 292 VKVDGNDGKIIRDFNDPDATYISFVTSAAEFDGNLYLASLQSNFIGILPLD 342 (351)
Q Consensus 292 ~~~~~~~g~~~~~~~~~~g~~~~~~~~~~~~~g~L~ig~~~~~~i~~~~~~ 342 (351)
.++|. +|+..+.+.... ...+.++..+++.||+....+..|.+++..
T Consensus 191 ~~~d~-dG~~~~~~~~~~---~~~P~glav~~~~lywtd~~~~~V~~~~~~ 237 (318)
T 3sov_A 191 HKSNL-DGTNRQAVVKGS---LPHPFALTLFEDILYWTDWSTHSILACNKY 237 (318)
T ss_dssp EEEET-TSCSCEEEECSC---CSCEEEEEEETTEEEEEETTTTEEEEEETT
T ss_pred EEEcC-CCCceEEEecCC---CCCceEEEEeCCEEEEEecCCCeEEEEECC
Confidence 89998 875544444311 334667777889999999999999999974
No 49
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=99.62 E-value=3.4e-13 Score=122.87 Aligned_cols=218 Identities=15% Similarity=0.181 Sum_probs=143.6
Q ss_pred eEEEeeCCCeEEEEEcCCEEEEEEcCCCeEEEE-eecCCccccceEEcCCCCEEEEeCCCCeEEEcCCC--eEEecCCCC
Q 018705 56 DVSVVVSKGALYTATRDGWVKYFILHNETLVNW-KHIDSQSLLGLTTTKDGGVILCDNEKGLLKVTEEG--VEAIVPDAS 132 (351)
Q Consensus 56 ~i~~d~~~g~lyv~~~~g~I~~~d~~~g~~~~~-~~~~~~p~~gl~~d~~G~L~v~d~~~gl~~~~~~g--~~~l~~~~~ 132 (351)
+.+++ ++.+|+++.+++|+++|++ |+.... ........ .++.+++|++|++...++++.++++| ...+.....
T Consensus 102 ~~~~~--~~~l~v~t~~~~l~~~d~~-g~~~~~~~~~~~~~~-~~~~~~~g~l~vgt~~~~l~~~d~~g~~~~~~~~~~~ 177 (330)
T 3hxj_A 102 DFTIF--EDILYVTSMDGHLYAINTD-GTEKWRFKTKKAIYA-TPIVSEDGTIYVGSNDNYLYAINPDGTEKWRFKTNDA 177 (330)
T ss_dssp CEEEE--TTEEEEECTTSEEEEECTT-SCEEEEEECSSCCCS-CCEECTTSCEEEECTTSEEEEECTTSCEEEEEECSSC
T ss_pred CceEE--CCEEEEEecCCEEEEEcCC-CCEEEEEcCCCceee-eeEEcCCCEEEEEcCCCEEEEECCCCCEeEEEecCCC
Confidence 34444 7899999999999999986 654322 22222334 78889999999999878999999667 333332235
Q ss_pred CcccEEEccCCcEEEEeCCCccCCcccccccccccCCceEEEEeCCCCeEE-EeecCccccceEEEcCCCCEEEEEecce
Q 018705 133 FTNDVIAASDGTLYFTVASTKYTPTDFYKDMAEGKPYGQLRKYDPKLKETT-VLHEGFYFANGIALSKNEDFVVVCESWK 211 (351)
Q Consensus 133 ~~n~l~~d~dG~ly~t~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~~~~~-~~~~~~~~~ngi~~~~dg~~lyv~~~~~ 211 (351)
....+++|++|++|++. . +|+++|+ +++.. ..........+++++++|. +|++...+
T Consensus 178 ~~~~~~~d~~g~l~v~t-~-------------------~l~~~d~-~g~~~~~~~~~~~~~~~~~~~~~g~-l~v~t~~~ 235 (330)
T 3hxj_A 178 ITSAASIGKDGTIYFGS-D-------------------KVYAINP-DGTEKWNFYAGYWTVTRPAISEDGT-IYVTSLDG 235 (330)
T ss_dssp CCSCCEECTTCCEEEES-S-------------------SEEEECT-TSCEEEEECCSSCCCSCCEECTTSC-EEEEETTT
T ss_pred ceeeeEEcCCCEEEEEe-C-------------------EEEEECC-CCcEEEEEccCCcceeceEECCCCe-EEEEcCCC
Confidence 67788999999999976 3 6888885 44433 2222234466788999887 99987654
Q ss_pred -eEEeecCCCCceeEEeccCCCCCCceEECCCCCEEEEEecCCchhhhhhhcChhHHHHHHhccchhhcccCCCCCCceE
Q 018705 212 -RYWLKGDRAGILDAFIENLPGGPDNINLAPDGSFWIGLIKMNQTGVRAIQKCREKWELLDAYPGLISLLLPMGSDAGAR 290 (351)
Q Consensus 212 -~~~i~~~~~~~~~~~~~~~~g~pd~i~~d~~G~lwva~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 290 (351)
.+.+. ........+. .....+..+.+|++|+||+++.. ++
T Consensus 236 gl~~~~-~~g~~~~~~~-~~~~~~~~~~~~~~g~l~v~t~~-------------------------------------gg 276 (330)
T 3hxj_A 236 HLYAIN-PDGTEKWRFK-TGKRIESSPVIGNTDTIYFGSYD-------------------------------------GH 276 (330)
T ss_dssp EEEEEC-TTSCEEEEEE-CSSCCCSCCEECTTSCEEEECTT-------------------------------------CE
T ss_pred eEEEEC-CCCCEeEEee-CCCCccccceEcCCCeEEEecCC-------------------------------------CC
Confidence 44443 2222222222 12233456788989999999643 47
Q ss_pred EEEEECCCCeEEEEEECCCCCcccceeEEEE-ECCEEEEEecCCCeEEEEeCCCC
Q 018705 291 VVKVDGNDGKIIRDFNDPDATYISFVTSAAE-FDGNLYLASLQSNFIGILPLDGP 344 (351)
Q Consensus 291 v~~~~~~~g~~~~~~~~~~g~~~~~~~~~~~-~~g~L~ig~~~~~~i~~~~~~~~ 344 (351)
+.++|+ +|+.+..+..+.. .+.+++. .+|+||+|+. .+.+...+....
T Consensus 277 l~~~d~-~g~~~~~~~~~~~----~~~~~~~d~~g~l~~gt~-~G~~~~~~~~~~ 325 (330)
T 3hxj_A 277 LYAINP-DGTEKWNFETGSW----IIATPVIDENGTIYFGTR-NGKFYALFNLEH 325 (330)
T ss_dssp EEEECT-TSCEEEEEECSSC----CCSCCEECTTCCEEEECT-TSCEEEEEC---
T ss_pred EEEECC-CCcEEEEEEcCCc----cccceEEcCCCEEEEEcC-CCeEEEEecccc
Confidence 999999 9998877765432 3445555 6789999996 444555554443
No 50
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=99.62 E-value=4.4e-14 Score=134.13 Aligned_cols=180 Identities=13% Similarity=0.181 Sum_probs=127.5
Q ss_pred cCCCceEEEeeCCCeEEEEEcCC--EEEEEEcCCCeE-EEE----eecCCccccceEEcC-CCCEEEEeCCCCeEEEcC-
Q 018705 51 VNHPEDVSVVVSKGALYTATRDG--WVKYFILHNETL-VNW----KHIDSQSLLGLTTTK-DGGVILCDNEKGLLKVTE- 121 (351)
Q Consensus 51 ~~~pe~i~~d~~~g~lyv~~~~g--~I~~~d~~~g~~-~~~----~~~~~~p~~gl~~d~-~G~L~v~d~~~gl~~~~~- 121 (351)
...|. ++++++++.+|++..++ +|++++..++.. ..+ ......|. ++++++ +|+||+++..+.+++++.
T Consensus 171 ~~~~~-ia~~~~g~~l~~~d~~~~~~I~~~d~~~~~~~~~~g~~~~~~~~~p~-~iav~p~~g~lyv~d~~~~I~~~d~~ 248 (409)
T 3hrp_A 171 FKGGK-PAVTKDKQRVYSIGWEGTHTVYVYMKASGWAPTRIGQLGSTFSGKIG-AVALDETEEWLYFVDSNKNFGRFNVK 248 (409)
T ss_dssp CCBCB-CEECTTSSEEEEEBSSTTCEEEEEEGGGTTCEEEEEECCTTSCSCCC-BCEECTTSSEEEEECTTCEEEEEETT
T ss_pred CCCCc-eeEecCCCcEEEEecCCCceEEEEEcCCCceeEEeeeccchhcCCcE-EEEEeCCCCeEEEEECCCcEEEEECC
Confidence 35577 99998778899887755 899999865533 232 11346789 999999 789999887666888886
Q ss_pred CC-eEEe----cCCC--CCcc-cEEEcc-CCcEEEEeCCCccCCcccccccccccCCceEEEEeCCCCeEEEeecC----
Q 018705 122 EG-VEAI----VPDA--SFTN-DVIAAS-DGTLYFTVASTKYTPTDFYKDMAEGKPYGQLRKYDPKLKETTVLHEG---- 188 (351)
Q Consensus 122 ~g-~~~l----~~~~--~~~n-~l~~d~-dG~ly~t~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~~~~~~~~~~---- 188 (351)
++ ...+ .... ..|. ++++++ +|+||+++.. .++|++|+++. +...+...
T Consensus 249 ~~~~~~~~~~~~~g~~~~~P~~~ia~~p~~g~lyv~d~~-----------------~~~I~~~~~~g-~~~~~~g~~~~~ 310 (409)
T 3hrp_A 249 TQEVTLIKQLELSGSLGTNPGPYLIYYFVDSNFYMSDQN-----------------LSSVYKITPDG-ECEWFCGSATQK 310 (409)
T ss_dssp TCCEEEEEECCCCSCCCCSSCCEEEEETTTTEEEEEETT-----------------TTEEEEECTTC-CEEEEEECTTCC
T ss_pred CCCEEEEecccccCCCCCCccccEEEeCCCCEEEEEeCC-----------------CCEEEEEecCC-CEEEEEeCCCCC
Confidence 44 5444 2211 2344 999999 5899999975 46899999874 44444322
Q ss_pred -----------ccccceEEEcCCCCEEEEEec-ce-eEEeecCCCCceeEEecc--C------------CCCCCceEECC
Q 018705 189 -----------FYFANGIALSKNEDFVVVCES-WK-RYWLKGDRAGILDAFIEN--L------------PGGPDNINLAP 241 (351)
Q Consensus 189 -----------~~~~ngi~~~~dg~~lyv~~~-~~-~~~i~~~~~~~~~~~~~~--~------------~g~pd~i~~d~ 241 (351)
+..|+||+++++|+ ||+++. .+ +++.-+...+....+... . -..|.++++|+
T Consensus 311 g~~dg~~~~~~~~~P~gia~d~dG~-lyvad~~~~~~I~~~~~~~G~v~~~~g~~~~~g~~~g~~~~~~~~~P~giavd~ 389 (409)
T 3hrp_A 311 TVQDGLREEALFAQPNGMTVDEDGN-FYIVDGFKGYCLRKLDILDGYVSTVAGQVDVASQIDGTPLEATFNYPYDICYDG 389 (409)
T ss_dssp SCBCEEGGGCBCSSEEEEEECTTCC-EEEEETTTTCEEEEEETTTTEEEEEEECTTCBSCCCBSTTTCCBSSEEEEEECS
T ss_pred CcCCCcccccEeCCCeEEEEeCCCC-EEEEeCCCCCEEEEEECCCCEEEEEeCCCCCCCcCCCChhceEeCCceEEEEcC
Confidence 56799999999998 999998 66 555443223444444321 0 12588999999
Q ss_pred CCCEEEEEec
Q 018705 242 DGSFWIGLIK 251 (351)
Q Consensus 242 ~G~lwva~~~ 251 (351)
+|+|||+...
T Consensus 390 ~g~lyVad~~ 399 (409)
T 3hrp_A 390 EGGYWIAEAW 399 (409)
T ss_dssp SSEEEEEEST
T ss_pred CCCEEEEECC
Confidence 9999999754
No 51
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=99.62 E-value=5.6e-14 Score=140.10 Aligned_cols=184 Identities=13% Similarity=0.124 Sum_probs=126.9
Q ss_pred CcCCCceEEEeeCCCeEEEE-EcCCEEEEEEcCCCe-EEEEe-ecCCccccceEEcC-CCCEEEEeCCCCeE-EEcCCC-
Q 018705 50 CVNHPEDVSVVVSKGALYTA-TRDGWVKYFILHNET-LVNWK-HIDSQSLLGLTTTK-DGGVILCDNEKGLL-KVTEEG- 123 (351)
Q Consensus 50 ~~~~pe~i~~d~~~g~lyv~-~~~g~I~~~d~~~g~-~~~~~-~~~~~p~~gl~~d~-~G~L~v~d~~~gl~-~~~~~g- 123 (351)
++..|.++++|+.++.+|++ ..+++|++++.++.. .+.+. .....|. ||++|. .++||++|...+.+ +++.+|
T Consensus 38 ~~~~~~~ld~~~~~~~ly~sD~~~~~I~r~~~~g~~~~~~v~~~~~~~P~-GlAvD~~~~~ly~~d~~~~~I~v~~~dG~ 116 (619)
T 3s94_A 38 GLEDAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTESVQNVVVSGLLSPD-GLACDWLGEKLYWTDSETNRIEVSNLDGS 116 (619)
T ss_dssp CCSCEEEEEEETTTTEEEEEETTTTEEEEEEC-----CEEEECSSCSCEE-EEEEETTTTEEEEEETTTTEEEEEETTSC
T ss_pred CCCceEEEEEEeCCCEEEEEECCCCeEEEEEccCCCceEEEEeCCCCCcC-eEEEEecCCEEEEEeCCCCEEEEEECCCC
Confidence 47789999999878887764 557899999985432 23332 2336799 999998 56899999876654 445677
Q ss_pred -eEEec-CCCCCcccEEEccC-CcEEEEeCCCccCCcccccccccccCCceEEEEeCCCCeEEEee-cCccccceEEEcC
Q 018705 124 -VEAIV-PDASFTNDVIAASD-GTLYFTVASTKYTPTDFYKDMAEGKPYGQLRKYDPKLKETTVLH-EGFYFANGIALSK 199 (351)
Q Consensus 124 -~~~l~-~~~~~~n~l~~d~d-G~ly~t~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~~~~~~~~-~~~~~~ngi~~~~ 199 (351)
.+++. .....|++|++||. |.||+||... .++|++.++++...+.+. ..+..|+||++++
T Consensus 117 ~~~~l~~~~l~~P~~Iavdp~~g~ly~tD~g~----------------~~~I~r~~~dG~~~~~l~~~~~~~P~Glald~ 180 (619)
T 3s94_A 117 LRKVLFWQELDQPRAIALDPSSGFMYWTDWGE----------------VPKIERAGMDGSSRFIIINSEIYWPNGLTLDY 180 (619)
T ss_dssp SCEEEECSSCSCCCCEEEETTTTEEEEEECSS----------------SCEEEEEETTSCSCEEEECSSCSSEEEEEEET
T ss_pred CEEEEEeCCCCCCceEEEecCCCeEEEeccCC----------------CCEEEEEECCCCceEEEEeCCCCCCcEEEEEc
Confidence 55554 44588999999995 7899999641 358999998755444443 5688999999999
Q ss_pred CCCEEEEEecce-eEEeecCCCCceeEEeccCCCCCCceEECCCCCEEEEEec
Q 018705 200 NEDFVVVCESWK-RYWLKGDRAGILDAFIENLPGGPDNINLAPDGSFWIGLIK 251 (351)
Q Consensus 200 dg~~lyv~~~~~-~~~i~~~~~~~~~~~~~~~~g~pd~i~~d~~G~lwva~~~ 251 (351)
+++.||+++... +++..+......+.+....-..|.+++++.+ ++|++...
T Consensus 181 ~~~~LY~aD~~~~~I~~~~~dG~~~~~~~~~~~~~P~gi~~~~~-~ly~td~~ 232 (619)
T 3s94_A 181 EEQKLYWADAKLNFIHKSNLDGTNRQAVVKGSLPHPFALTLFED-ILYWTDWS 232 (619)
T ss_dssp TTTEEEEEETTTCCEEEESSSCCEEC---------CCCEEESSS-EEEEECTT
T ss_pred cCCEEEEEeCCCCeEEEecCCCCccEEEEeCCCCCceEEEEeCC-EEEEecCC
Confidence 888899999877 6665543222333333322246899999866 89998643
No 52
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=99.61 E-value=1e-13 Score=138.24 Aligned_cols=184 Identities=11% Similarity=0.096 Sum_probs=131.5
Q ss_pred CcCCCceEEEeeCCCeEEEEE-cCCEEEEEEcCCCeEEEEeec-CCccccceEEcC-CCCEEEEeCCCCeEEEc-CCC--
Q 018705 50 CVNHPEDVSVVVSKGALYTAT-RDGWVKYFILHNETLVNWKHI-DSQSLLGLTTTK-DGGVILCDNEKGLLKVT-EEG-- 123 (351)
Q Consensus 50 ~~~~pe~i~~d~~~g~lyv~~-~~g~I~~~d~~~g~~~~~~~~-~~~p~~gl~~d~-~G~L~v~d~~~gl~~~~-~~g-- 123 (351)
.+..|.+|++|+.++.+|++. ..++|+++++++...+.+... ...|. ||++|. .++||++|...+.+.+. .+|
T Consensus 347 ~l~~~~~ld~d~~~~~ly~sD~~~~~I~r~~~~g~~~~~v~~~~~~~p~-GlAvD~~~~~lY~tD~~~~~I~v~~~~G~~ 425 (619)
T 3s94_A 347 DIRHAIAIDYDPVEGYIYWTDDEVRAIRRSFIDGSGSQFVVTAQIAHPD-GIAVDWVARNLYWTDTGTDRIEVTRLNGTM 425 (619)
T ss_dssp CCSSEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSCCC-EEEEETTTTEEEEEETTTTEEEEEETTSCS
T ss_pred ccCccEEEEEEcCCCeEEEEeCCCCeEEEEEcCCCccEEEEECCCCCcC-ceEEecccCcEEEEeCCCCcEEEEeCCCCe
Confidence 366788999997788887654 588999999865444444433 36899 999996 67899999877655554 566
Q ss_pred eEEecC-CCCCcccEEEccC-CcEEEEeCCCccCCcccccccccccCCceEEEEeCCCCeEEEe-ecCccccceEEEcCC
Q 018705 124 VEAIVP-DASFTNDVIAASD-GTLYFTVASTKYTPTDFYKDMAEGKPYGQLRKYDPKLKETTVL-HEGFYFANGIALSKN 200 (351)
Q Consensus 124 ~~~l~~-~~~~~n~l~~d~d-G~ly~t~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~~~~~~~-~~~~~~~ngi~~~~d 200 (351)
.+++.. ....|++|++||. |.||+||... .++|++.++++...+.+ ...+..||||+++++
T Consensus 426 ~~~l~~~~l~~P~~iavdp~~G~ly~tD~g~----------------~~~I~r~~~dG~~~~~l~~~~l~~P~GlalD~~ 489 (619)
T 3s94_A 426 RKILISEDLEEPRAIVLDPMVGYMYWTDWGE----------------IPKIERAALDGSDRVVLVNTSLGWPNGLALDYD 489 (619)
T ss_dssp CEEEECTTCCSEEEEEEETTTTEEEEEECSS----------------SCEEEEEETTSCSCEEEECSSCSCEEEEEEETT
T ss_pred EEEEEECCCCCeeeEEEEcCCCcEEEecCCC----------------CCEEEEEccCCCccEEEEeCCCCCCeeeEEccc
Confidence 555543 4588999999995 8999999751 25799998875444444 346889999999998
Q ss_pred CCEEEEEecce-eEEeecCCCCceeEEeccCCCCCCceEECCCCCEEEEEec
Q 018705 201 EDFVVVCESWK-RYWLKGDRAGILDAFIENLPGGPDNINLAPDGSFWIGLIK 251 (351)
Q Consensus 201 g~~lyv~~~~~-~~~i~~~~~~~~~~~~~~~~g~pd~i~~d~~G~lwva~~~ 251 (351)
++.||++++.. +++..+......+.+....-..|.+++++. ++||++...
T Consensus 490 ~~~LY~aD~~~~~I~~~~~dG~~~~~~~~~~l~~P~glav~~-~~ly~tD~~ 540 (619)
T 3s94_A 490 EGKIYWGDAKTDKIEVMNTDGTGRRVLVEDKIPHIFGFTLLG-DYVYWTDWQ 540 (619)
T ss_dssp TTEEEEEETTTTEEEEEESSSCCCEEEEECCCCSSCCEEEET-TEEEEECTT
T ss_pred CCEEEEEECCCCEEEEEecCCCceEEEeccCCCCcEEEEEEC-CEEEEeecC
Confidence 88899999877 555433221222333322234689999975 489998753
No 53
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=99.61 E-value=2.2e-14 Score=131.88 Aligned_cols=186 Identities=16% Similarity=0.158 Sum_probs=121.7
Q ss_pred ecCCCcCCCceEEEeeCCCeEEEEE-cCCEEEEEEcCCC--eEEEEee---------cCCccccceEEcC-CCCEEEEeC
Q 018705 46 LGEGCVNHPEDVSVVVSKGALYTAT-RDGWVKYFILHNE--TLVNWKH---------IDSQSLLGLTTTK-DGGVILCDN 112 (351)
Q Consensus 46 i~~~~~~~pe~i~~d~~~g~lyv~~-~~g~I~~~d~~~g--~~~~~~~---------~~~~p~~gl~~d~-~G~L~v~d~ 112 (351)
...+.+..|.++++|+ +|.+|++. .+++|.++++++. .+..+.. ....|. ++++|+ +|+|||++.
T Consensus 85 ~~~~~~~~p~gia~d~-~g~l~v~d~~~~~v~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~P~-~ia~~~~~g~lyv~d~ 162 (329)
T 3fvz_A 85 SGKNLFYLPHGLSIDT-DGNYWVTDVALHQVFKLDPHSKEGPLLILGRSMQPGSDQNHFCQPT-DVAVEPSTGAVFVSDG 162 (329)
T ss_dssp ECTTTCSSEEEEEECT-TSCEEEEETTTTEEEEECTTCSSCCSEEESBTTBCCCSTTCCSSEE-EEEECTTTCCEEEEEC
T ss_pred cCCCccCCceEEEECC-CCCEEEEECCCCEEEEEeCCCCeEEEEEecccCCCCCCccccCCCc-EEEEeCCCCeEEEEeC
Confidence 3445577899999994 56677765 4789999998443 2334321 123699 999998 899999995
Q ss_pred --CCCeEEEcCCC--eEEecC----------CCCCcccEEEccC-CcEEEEeCCCccCCcccccccccccCCceEEEEeC
Q 018705 113 --EKGLLKVTEEG--VEAIVP----------DASFTNDVIAASD-GTLYFTVASTKYTPTDFYKDMAEGKPYGQLRKYDP 177 (351)
Q Consensus 113 --~~gl~~~~~~g--~~~l~~----------~~~~~n~l~~d~d-G~ly~t~~~~~~~~~~~~~~~~~~~~~g~l~~~d~ 177 (351)
...+.+++++| ...+.. ....|++|++|++ |++|+++.. .++|.+|++
T Consensus 163 ~~~~~I~~~~~~g~~~~~~~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~~-----------------~~~I~~~~~ 225 (329)
T 3fvz_A 163 YCNSRIVQFSPSGKFVTQWGEESSGSSPRPGQFSVPHSLALVPHLDQLCVADRE-----------------NGRIQCFKT 225 (329)
T ss_dssp SSCCEEEEECTTSCEEEEECEECCSSSCCTTEESCEEEEEEETTTTEEEEEETT-----------------TTEEEEEET
T ss_pred CCCCeEEEEcCCCCEEEEeccCCCCCCCCCcccCCCcEEEEECCCCEEEEEECC-----------------CCEEEEEEC
Confidence 45677777777 444431 1256999999998 899999976 568999999
Q ss_pred CCCeEEEeec---CccccceEEEcC------CCCEEEEEecce-eEEeecCCCCce-eEEe--ccCCCCCCceEECCCCC
Q 018705 178 KLKETTVLHE---GFYFANGIALSK------NEDFVVVCESWK-RYWLKGDRAGIL-DAFI--ENLPGGPDNINLAPDGS 244 (351)
Q Consensus 178 ~~~~~~~~~~---~~~~~ngi~~~~------dg~~lyv~~~~~-~~~i~~~~~~~~-~~~~--~~~~g~pd~i~~d~~G~ 244 (351)
++|+...... ....+.+++++| +|+ +|+++... ++.+-+...++. ..+. ......|.++++|++|+
T Consensus 226 ~~G~~~~~~~~~~~~~~~~~~~~~pg~~~~~~g~-~~v~~~~~~~v~~~~~~~g~~~~~~~~~~~~~~~p~~ia~~~dG~ 304 (329)
T 3fvz_A 226 DTKEFVREIKHASFGRNVFAISYIPGFLFAVNGK-PYFGDQEPVQGFVMNFSSGEIIDVFKPVRKHFDMPHDIVASEDGT 304 (329)
T ss_dssp TTCCEEEEECCTTTTTCEEEEEEETTEEEEEECC-CCTTCSCCCCEEEEETTTCCEEEEECCSSSCCSSEEEEEECTTSE
T ss_pred CCCcEEEEEeccccCCCcceeeecCCEEEEeCCC-EEeccCCCcEEEEEEcCCCeEEEEEcCCCCccCCeeEEEECCCCC
Confidence 8666543331 123455666666 554 44444433 333322222332 2221 11223588999999999
Q ss_pred EEEEEec
Q 018705 245 FWIGLIK 251 (351)
Q Consensus 245 lwva~~~ 251 (351)
+||+...
T Consensus 305 lyvad~~ 311 (329)
T 3fvz_A 305 VYIGDAH 311 (329)
T ss_dssp EEEEESS
T ss_pred EEEEECC
Confidence 9999754
No 54
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=99.60 E-value=1.1e-13 Score=125.34 Aligned_cols=179 Identities=13% Similarity=0.117 Sum_probs=124.5
Q ss_pred CCCceEEEeeCCCeEEEEEcCCEEEEEEcCCCeEEEE-eec-----CCccccceEEcCCCCEEEEeCC------------
Q 018705 52 NHPEDVSVVVSKGALYTATRDGWVKYFILHNETLVNW-KHI-----DSQSLLGLTTTKDGGVILCDNE------------ 113 (351)
Q Consensus 52 ~~pe~i~~d~~~g~lyv~~~~g~I~~~d~~~g~~~~~-~~~-----~~~p~~gl~~d~~G~L~v~d~~------------ 113 (351)
..|.+++++++++.+|++...++|++++.+ ++++.+ ... ...|. ++++|++|++|+++..
T Consensus 71 ~~~~~i~~~~~~g~l~v~~~~~~l~~~d~~-g~~~~~~~~~~~~~~~~~~~-~i~~d~~g~l~v~~~~~~~~~~~~~~~~ 148 (314)
T 1pjx_A 71 GIPAGCQCDRDANQLFVADMRLGLLVVQTD-GTFEEIAKKDSEGRRMQGCN-DCAFDYEGNLWITAPAGEVAPADYTRSM 148 (314)
T ss_dssp CCEEEEEECSSSSEEEEEETTTEEEEEETT-SCEEECCSBCTTSCBCBCCC-EEEECTTSCEEEEECBCBCTTSCCCBTT
T ss_pred CCCceEEEecCCCcEEEEECCCCEEEEeCC-CCEEEEEeccCCCccccCCc-CEEECCCCCEEEEecCcccccccccccc
Confidence 568899999543899999877789999997 877655 321 23578 9999999999999865
Q ss_pred ----CCeEEEcCCC-eEEecCCCCCcccEEEc----cCC-cEEEEeCCCccCCcccccccccccCCceEEEEeCC-CCeE
Q 018705 114 ----KGLLKVTEEG-VEAIVPDASFTNDVIAA----SDG-TLYFTVASTKYTPTDFYKDMAEGKPYGQLRKYDPK-LKET 182 (351)
Q Consensus 114 ----~gl~~~~~~g-~~~l~~~~~~~n~l~~d----~dG-~ly~t~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~-~~~~ 182 (351)
.+++++++++ .+.+......|++++++ ++| .+|+++.. .++|++|+.+ +++.
T Consensus 149 ~~~~~~l~~~~~~g~~~~~~~~~~~~~~i~~~~~~d~dg~~l~v~~~~-----------------~~~i~~~~~~~~g~~ 211 (314)
T 1pjx_A 149 QEKFGSIYCFTTDGQMIQVDTAFQFPNGIAVRHMNDGRPYQLIVAETP-----------------TKKLWSYDIKGPAKI 211 (314)
T ss_dssp SSSCEEEEEECTTSCEEEEEEEESSEEEEEEEECTTSCEEEEEEEETT-----------------TTEEEEEEEEETTEE
T ss_pred cCCCCeEEEECCCCCEEEeccCCCCcceEEEecccCCCCCEEEEEECC-----------------CCeEEEEECCCCCcc
Confidence 3688888667 55544333678999999 999 69999864 3579998864 3443
Q ss_pred E---Eee---cCc-cccceEEEcCCCCEEEEEecce-eEEeecCCCCce-eEEeccCCCCCCceEECCCCC-EEEEEec
Q 018705 183 T---VLH---EGF-YFANGIALSKNEDFVVVCESWK-RYWLKGDRAGIL-DAFIENLPGGPDNINLAPDGS-FWIGLIK 251 (351)
Q Consensus 183 ~---~~~---~~~-~~~ngi~~~~dg~~lyv~~~~~-~~~i~~~~~~~~-~~~~~~~~g~pd~i~~d~~G~-lwva~~~ 251 (351)
. .+. ... ..|++|+++++|+ +|+++... .+..-+...++. ..+. .....|.+++++++|+ ||++...
T Consensus 212 ~~~~~~~~~~~~~~~~p~~i~~d~~G~-l~v~~~~~~~i~~~d~~~g~~~~~~~-~~~~~~~~i~~~~dg~~l~v~~~~ 288 (314)
T 1pjx_A 212 ENKKVWGHIPGTHEGGADGMDFDEDNN-LLVANWGSSHIEVFGPDGGQPKMRIR-CPFEKPSNLHFKPQTKTIFVTEHE 288 (314)
T ss_dssp EEEEEEEECCCCSSCEEEEEEEBTTCC-EEEEEETTTEEEEECTTCBSCSEEEE-CSSSCEEEEEECTTSSEEEEEETT
T ss_pred ccceEEEECCCCCCCCCCceEECCCCC-EEEEEcCCCEEEEEcCCCCcEeEEEe-CCCCCceeEEECCCCCEEEEEeCC
Confidence 2 111 111 5689999999997 99987543 333333322332 2222 1114578899999998 9999753
No 55
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=99.59 E-value=3e-13 Score=122.74 Aligned_cols=181 Identities=12% Similarity=0.077 Sum_probs=121.6
Q ss_pred cCCCceEEEeeCCCeEEEEE-cCCEEEEEEcCCCeEEEEeecC--------CccccceEE---cCCCCEEEE-eC-----
Q 018705 51 VNHPEDVSVVVSKGALYTAT-RDGWVKYFILHNETLVNWKHID--------SQSLLGLTT---TKDGGVILC-DN----- 112 (351)
Q Consensus 51 ~~~pe~i~~d~~~g~lyv~~-~~g~I~~~d~~~g~~~~~~~~~--------~~p~~gl~~---d~~G~L~v~-d~----- 112 (351)
...||++.||+.++++|+++ ..|+|.++++.++..+...... ..+. ||.+ |++|+|||+ +.
T Consensus 12 ~~yPE~~~wd~~~g~~~vs~l~~g~V~~~~~~~~~~~~~~~~~~s~~g~~~~~~s-Gl~~~~~D~~grL~vv~~~~~af~ 90 (334)
T 2p9w_A 12 NLTPEDTIYDRTRQVFYQSNLYKGRIEVYNPKTQSHFNVVIDGASSNGDGEQQMS-GLSLLTHDNSKRLFAVMKNAKSFN 90 (334)
T ss_dssp TCCCSCEEEETTTTEEEEEETTTTEEEEECTTTCCEEEECCTTTCCSSCCSEEEE-EEEESSSSSCCEEEEEEEETTTTC
T ss_pred ccCCcCccCcCCCCEEEEEeccCCEEEEEcCCCCeEEEEecCCccccCCCcceee-EEEEeccCCCCcEEEEEccccccc
Confidence 45799999997789999988 5899999999766554442221 1467 9999 799999994 41
Q ss_pred --------CCCeEEEcCC----C-eEEecC--------------CCCCcccEEEccCCcEEEEeCCCccCCccccccccc
Q 018705 113 --------EKGLLKVTEE----G-VEAIVP--------------DASFTNDVIAASDGTLYFTVASTKYTPTDFYKDMAE 165 (351)
Q Consensus 113 --------~~gl~~~~~~----g-~~~l~~--------------~~~~~n~l~~d~dG~ly~t~~~~~~~~~~~~~~~~~ 165 (351)
...+++++.. + .....+ ....+||+++|++|++|++++.
T Consensus 91 ~~g~~~~g~~~v~~~Dl~~~~tg~~~~~~dL~~~~~~~~~~~g~~~~~~nDvavD~~GnaYVt~s~-------------- 156 (334)
T 2p9w_A 91 FADQSSHGASSFHSFNLPLSENSKPVWSVNFEKVQDEFEKKAGKRPFGVVQSAQDRDGNSYVAFAL-------------- 156 (334)
T ss_dssp TTSCCSSSCCEEEEEESSCCTTCCCSEEEESHHHHHHHHHHHSSCCEEEEEEEECTTSCEEEEEEE--------------
T ss_pred ccccccCCCCEEEEEcCCcCCCCCEEEEecCccccccccccccccccCCceeEECCCCCEEEeCCC--------------
Confidence 2458888844 5 222111 1135999999999999999874
Q ss_pred ccCC-ceEEEEeCCCCeEEEeec------CccccceEEEcCCCCEEEEEecce---eEEeecCCCCceeEEec--c---C
Q 018705 166 GKPY-GQLRKYDPKLKETTVLHE------GFYFANGIALSKNEDFVVVCESWK---RYWLKGDRAGILDAFIE--N---L 230 (351)
Q Consensus 166 ~~~~-g~l~~~d~~~~~~~~~~~------~~~~~ngi~~~~dg~~lyv~~~~~---~~~i~~~~~~~~~~~~~--~---~ 230 (351)
. +.|++++|++.....+.. ....+|||+++|||+.|+++++.+ ++.+..+ ...++-.. + .
T Consensus 157 ---~~~~I~rV~pdG~~~~~~~~~~~~~~~~~G~nGIv~~pdg~~Liv~~~~g~L~~fD~~~p--v~~~v~~~~~G~~~~ 231 (334)
T 2p9w_A 157 ---GMPAIARVSADGKTVSTFAWESGNGGQRPGYSGITFDPHSNKLIAFGGPRALTAFDVSKP--YAWPEPVKINGDFGT 231 (334)
T ss_dssp ---SSCEEEEECTTSCCEEEEEECCCCSSSCCSCSEEEEETTTTEEEEESSSSSEEEEECSSS--SCCCEECEESSCCCC
T ss_pred ---CCCeEEEEeCCCCEEeeeeecCCCcccccCcceEEEeCCCCEEEEEcCCCeEEEEcCCCC--cceeecccccCCccc
Confidence 3 679999998654544321 123578999999999999998855 3443321 11011111 1 1
Q ss_pred CCCCCce-EECCCCCE-EEEEec
Q 018705 231 PGGPDNI-NLAPDGSF-WIGLIK 251 (351)
Q Consensus 231 ~g~pd~i-~~d~~G~l-wva~~~ 251 (351)
...+|+| ....+|++ +|+...
T Consensus 232 ~~~~dgilp~~~~G~vllV~~~~ 254 (334)
T 2p9w_A 232 LSGTEKIVTVPVGNESVLVGARA 254 (334)
T ss_dssp CTTEEEEEEEEETTEEEEEEEET
T ss_pred ccCcccccccccCCEEEEEEcCC
Confidence 1247885 55678886 777643
No 56
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=99.58 E-value=1e-13 Score=125.48 Aligned_cols=178 Identities=9% Similarity=0.075 Sum_probs=125.6
Q ss_pred CCCceEEEeeCCCeEEEEEcCCEEEEEEcCCCeEEEEeec-----CCccccceEEcCCCCEEEEeCC------------C
Q 018705 52 NHPEDVSVVVSKGALYTATRDGWVKYFILHNETLVNWKHI-----DSQSLLGLTTTKDGGVILCDNE------------K 114 (351)
Q Consensus 52 ~~pe~i~~d~~~g~lyv~~~~g~I~~~d~~~g~~~~~~~~-----~~~p~~gl~~d~~G~L~v~d~~------------~ 114 (351)
..|.+++++ .+|.+|++. +++|+++|+++++++.+... ..+|+ ++++|++|++|+++.. .
T Consensus 54 ~~~~~i~~~-~dG~l~v~~-~~~l~~~d~~~g~~~~~~~~~~~~~~~~~~-di~~d~dG~l~~~~~~~~~~~~~~~~~~~ 130 (297)
T 3g4e_A 54 APVSSVALR-QSGGYVATI-GTKFCALNWKEQSAVVLATVDNDKKNNRFN-DGKVDPAGRYFAGTMAEETAPAVLERHQG 130 (297)
T ss_dssp SCEEEEEEB-TTSSEEEEE-TTEEEEEETTTTEEEEEEECCTTCSSEEEE-EEEECTTSCEEEEEEECCSBTTBCCTTCE
T ss_pred CceEEEEEC-CCCCEEEEE-CCeEEEEECCCCcEEEEEecCCCCCCCCCC-CEEECCCCCEEEecCCcccccccccCCCc
Confidence 458899999 466699987 56799999988888766432 23578 8999999999998732 3
Q ss_pred CeEEEcCCC-eEEecCCCCCcccEEEccCC-cEEEEeCCCccCCcccccccccccCCceEEEEeC--CCCeEE---Eee-
Q 018705 115 GLLKVTEEG-VEAIVPDASFTNDVIAASDG-TLYFTVASTKYTPTDFYKDMAEGKPYGQLRKYDP--KLKETT---VLH- 186 (351)
Q Consensus 115 gl~~~~~~g-~~~l~~~~~~~n~l~~d~dG-~ly~t~~~~~~~~~~~~~~~~~~~~~g~l~~~d~--~~~~~~---~~~- 186 (351)
++++++++| ...+......||++++++|| .+|++++. .++|++|+. .+|++. .+.
T Consensus 131 ~l~~~d~~g~~~~~~~~~~~pngi~~spdg~~lyv~~~~-----------------~~~i~~~~~d~~~G~~~~~~~~~~ 193 (297)
T 3g4e_A 131 ALYSLFPDHHVKKYFDQVDISNGLDWSLDHKIFYYIDSL-----------------SYSVDAFDYDLQTGQISNRRSVYK 193 (297)
T ss_dssp EEEEECTTSCEEEEEEEESBEEEEEECTTSCEEEEEEGG-----------------GTEEEEEEECTTTCCEEEEEEEEE
T ss_pred EEEEEECCCCEEEEeeccccccceEEcCCCCEEEEecCC-----------------CCcEEEEeccCCCCcccCcEEEEE
Confidence 588888777 55554444789999999999 59999875 357888863 556542 222
Q ss_pred --cCccccceEEEcCCCCEEEEEecce-eEEeecCCCCceeEEeccCC-CCCCceEEC-CCC-CEEEEEec
Q 018705 187 --EGFYFANGIALSKNEDFVVVCESWK-RYWLKGDRAGILDAFIENLP-GGPDNINLA-PDG-SFWIGLIK 251 (351)
Q Consensus 187 --~~~~~~ngi~~~~dg~~lyv~~~~~-~~~i~~~~~~~~~~~~~~~~-g~pd~i~~d-~~G-~lwva~~~ 251 (351)
.....|+|++++++|+ ||++...+ ++..-++..++..... ..+ ..|.+++++ +++ .|||++..
T Consensus 194 ~~~~~~~p~g~~~d~~G~-lwva~~~~~~v~~~d~~tG~~~~~i-~~p~~~~t~~~f~g~d~~~L~vt~~~ 262 (297)
T 3g4e_A 194 LEKEEQIPDGMCIDAEGK-LWVACYNGGRVIRLDPVTGKRLQTV-KLPVDKTTSCCFGGKNYSEMYVTCAR 262 (297)
T ss_dssp CCGGGCEEEEEEEBTTSC-EEEEEETTTEEEEECTTTCCEEEEE-ECSSSBEEEEEEESGGGCEEEEEEBC
T ss_pred CCCCCCCCCeeEECCCCC-EEEEEcCCCEEEEEcCCCceEEEEE-ECCCCCceEEEEeCCCCCEEEEEcCC
Confidence 1235799999999997 99998655 5444444334433222 233 346788886 565 59999865
No 57
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=99.57 E-value=3.7e-13 Score=134.33 Aligned_cols=186 Identities=12% Similarity=0.072 Sum_probs=130.6
Q ss_pred CCcCCCceEEEeeCCCeEEEE-EcCCEEEEEEcCCCeEE-EEee------cCCccccceEEcCC-CCEEEEeCCCCeEEE
Q 018705 49 GCVNHPEDVSVVVSKGALYTA-TRDGWVKYFILHNETLV-NWKH------IDSQSLLGLTTTKD-GGVILCDNEKGLLKV 119 (351)
Q Consensus 49 ~~~~~pe~i~~d~~~g~lyv~-~~~g~I~~~d~~~g~~~-~~~~------~~~~p~~gl~~d~~-G~L~v~d~~~gl~~~ 119 (351)
..+..+.+|++|+.++.+|.+ ...++|++++.++...+ .+.. ....|. ||++|.. ++||++|...+.+.+
T Consensus 337 ~~~~~~~~ld~d~~~~~iy~sD~~~~~I~r~~~~g~~~~~v~~~~~~~~~~~~~p~-glAvD~~~~nLY~td~~~~~I~v 415 (628)
T 4a0p_A 337 HSLRNVRAIDYDPLDKQLYWIDSRQNMIRKAQEDGSQGFTVVVSSVPSQNLEIQPY-DLSIDIYSRYIYWTCEATNVINV 415 (628)
T ss_dssp TTCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEEC--------CCCEE-EEEEETTTTEEEEEETTTTEEEE
T ss_pred hhcCCceEEEEecCCCeEEEEecCcceEEEEEcCCCCceEEEEcccccccccCCcc-eEEeeccCCeEEEEcCCCCEEEE
Confidence 335678899999878877664 46789999998443322 2322 235799 9999987 579999988766655
Q ss_pred c-CCC--eEEec-CCCCCcccEEEcc-CCcEEEEeCCCccCCcccccccccccCCceEEEEeCCCCeEEEee-cCccccc
Q 018705 120 T-EEG--VEAIV-PDASFTNDVIAAS-DGTLYFTVASTKYTPTDFYKDMAEGKPYGQLRKYDPKLKETTVLH-EGFYFAN 193 (351)
Q Consensus 120 ~-~~g--~~~l~-~~~~~~n~l~~d~-dG~ly~t~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~~~~~~~~-~~~~~~n 193 (351)
. .+| .+++. .....|++|+++| +|.||+||.... .++|++.++++...+.+. ..+..|+
T Consensus 416 ~~~~G~~~~~l~~~~l~~Pr~iavdp~~g~ly~tD~g~~---------------~~~I~r~~~dG~~~~~l~~~~l~~P~ 480 (628)
T 4a0p_A 416 TRLDGRSVGVVLKGEQDRPRAVVVNPEKGYMYFTNLQER---------------SPKIERAALDGTEREVLFFSGLSKPI 480 (628)
T ss_dssp EETTSCEEEEEEECTTCCEEEEEEETTTTEEEEEEEETT---------------EEEEEEEETTSCSCEEEECSSCSCEE
T ss_pred EECCCCeEEEEEeCCCCceeeEEEecCCCeEEEeecCCC---------------CCeEEEEeCCCCCcEEEEeccCCCcc
Confidence 5 577 44443 3457899999999 799999997511 137999998755454444 4688999
Q ss_pred eEEEcCCCCEEEEEecce-eEEeecCCCCceeEEeccCCCCCCceEECCCCCEEEEEec
Q 018705 194 GIALSKNEDFVVVCESWK-RYWLKGDRAGILDAFIENLPGGPDNINLAPDGSFWIGLIK 251 (351)
Q Consensus 194 gi~~~~dg~~lyv~~~~~-~~~i~~~~~~~~~~~~~~~~g~pd~i~~d~~G~lwva~~~ 251 (351)
||+++++++.||+++... +++..+......+.+.......|.+++++. |+||++...
T Consensus 481 gla~D~~~~~LYw~D~~~~~I~~~~~dG~~r~~~~~~~~~~P~glav~~-~~ly~tD~~ 538 (628)
T 4a0p_A 481 ALALDSRLGKLFWADSDLRRIESSDLSGANRIVLEDSNILQPVGLTVFE-NWLYWIDKQ 538 (628)
T ss_dssp EEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSCEEEEEEET-TEEEEEETT
T ss_pred EEEEeCCCCEEEEEeCCCCEEEEEeCCCCceEEEEcCCCCCcEEEEEEC-CEEEEEECC
Confidence 999999988899999876 544433222233444433234689999986 889998743
No 58
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.56 E-value=7.8e-12 Score=113.83 Aligned_cols=236 Identities=13% Similarity=0.115 Sum_probs=149.3
Q ss_pred cCCCceEEEeeCCCeEEEEEc-CCEEEEEEcCCCeE-EEEeecCCccccc-eEEcCCCCEEEEeCCC----CeEEEcC-C
Q 018705 51 VNHPEDVSVVVSKGALYTATR-DGWVKYFILHNETL-VNWKHIDSQSLLG-LTTTKDGGVILCDNEK----GLLKVTE-E 122 (351)
Q Consensus 51 ~~~pe~i~~d~~~g~lyv~~~-~g~I~~~d~~~g~~-~~~~~~~~~p~~g-l~~d~~G~L~v~d~~~----gl~~~~~-~ 122 (351)
...| +++++|++..+|++.. ++.|+.+|..+++. .........|. . ++++++|+.+++.... .+..++. +
T Consensus 40 ~~~~-~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~-~~~~~s~dg~~l~~~~~~~~~~~i~v~d~~~ 117 (331)
T 3u4y_A 40 YDFV-DTAITSDCSNVVVTSDFCQTLVQIETQLEPPKVVAIQEGQSSM-ADVDITPDDQFAVTVTGLNHPFNMQSYSFLK 117 (331)
T ss_dssp CCEE-EEEECSSSCEEEEEESTTCEEEEEECSSSSCEEEEEEECSSCC-CCEEECTTSSEEEECCCSSSSCEEEEEETTT
T ss_pred CCcc-eEEEcCCCCEEEEEeCCCCeEEEEECCCCceeEEecccCCCCc-cceEECCCCCEEEEecCCCCcccEEEEECCC
Confidence 3456 9999977777888776 78999999988875 44444556677 6 9999999744454444 3555564 5
Q ss_pred C--eEEecCCCCCcccEEEccCCc-EEEEeCCCccCCcccccccccccCCce-EEEEeCC-CCeE----EEeecCccccc
Q 018705 123 G--VEAIVPDASFTNDVIAASDGT-LYFTVASTKYTPTDFYKDMAEGKPYGQ-LRKYDPK-LKET----TVLHEGFYFAN 193 (351)
Q Consensus 123 g--~~~l~~~~~~~n~l~~d~dG~-ly~t~~~~~~~~~~~~~~~~~~~~~g~-l~~~d~~-~~~~----~~~~~~~~~~n 193 (351)
+ ...+... ..|++++++|||+ +|+++.. .+. +..|+.+ .+.+ .........|.
T Consensus 118 ~~~~~~~~~~-~~~~~~~~spdg~~l~~~~~~-----------------~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~ 179 (331)
T 3u4y_A 118 NKFISTIPIP-YDAVGIAISPNGNGLILIDRS-----------------SANTVRRFKIDADGVLFDTGQEFISGGTRPF 179 (331)
T ss_dssp TEEEEEEECC-TTEEEEEECTTSSCEEEEEET-----------------TTTEEEEEEECTTCCEEEEEEEEECSSSSEE
T ss_pred CCeEEEEECC-CCccceEECCCCCEEEEEecC-----------------CCceEEEEEECCCCcEeecCCccccCCCCcc
Confidence 5 3434333 5789999999995 8888754 123 4444322 1222 12223345689
Q ss_pred eEEEcCCCCEEEEEecce-eEEeecCCCCc----eeEEeccCCCCCCceEECCCCC-EEEEEecCCchhhhhhhcChhHH
Q 018705 194 GIALSKNEDFVVVCESWK-RYWLKGDRAGI----LDAFIENLPGGPDNINLAPDGS-FWIGLIKMNQTGVRAIQKCREKW 267 (351)
Q Consensus 194 gi~~~~dg~~lyv~~~~~-~~~i~~~~~~~----~~~~~~~~~g~pd~i~~d~~G~-lwva~~~~~~~~~~~~~~~~~~~ 267 (351)
+++++|||+.+|++.... .+.+-+...++ ...+. ....|.+++++++|+ +|++...
T Consensus 180 ~~~~spdg~~l~v~~~~~~~v~v~d~~~~~~~~~~~~~~--~~~~~~~~~~spdg~~l~v~~~~---------------- 241 (331)
T 3u4y_A 180 NITFTPDGNFAFVANLIGNSIGILETQNPENITLLNAVG--TNNLPGTIVVSRDGSTVYVLTES---------------- 241 (331)
T ss_dssp EEEECTTSSEEEEEETTTTEEEEEECSSTTSCEEEEEEE--CSSCCCCEEECTTSSEEEEECSS----------------
T ss_pred ceEECCCCCEEEEEeCCCCeEEEEECCCCcccceeeecc--CCCCCceEEECCCCCEEEEEEcC----------------
Confidence 999999999899987644 33332222222 22222 235688999999998 7777432
Q ss_pred HHHHhccchhhcccCCCCCCceEEEEEECCCCeE--EEEEECC---CCCcccceeEEEE--ECCEEEEEecCCCeEEEEe
Q 018705 268 ELLDAYPGLISLLLPMGSDAGARVVKVDGNDGKI--IRDFNDP---DATYISFVTSAAE--FDGNLYLASLQSNFIGILP 340 (351)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~g~~--~~~~~~~---~g~~~~~~~~~~~--~~g~L~ig~~~~~~i~~~~ 340 (351)
.+.|..+|.++++. +..+... ..........+.. ++..||+++...+.|.+++
T Consensus 242 --------------------~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~d 301 (331)
T 3u4y_A 242 --------------------TVDVFNFNQLSGTLSFVKSFGHGLLIDPRPLFGANQMALNKTETKLFISANISRELKVFT 301 (331)
T ss_dssp --------------------EEEEEEEETTTTEEEEEEEEECCCCCCCGGGTTCCCEEECTTSSEEEEEETTTTEEEEEE
T ss_pred --------------------CCEEEEEECCCCceeeecccccccccCCCCcccccceEECCCCCEEEEecCCCCcEEEEE
Confidence 24578889856776 4444321 1111111222333 4567999998888999999
Q ss_pred CCCC
Q 018705 341 LDGP 344 (351)
Q Consensus 341 ~~~~ 344 (351)
+.+.
T Consensus 302 ~~~~ 305 (331)
T 3u4y_A 302 ISGK 305 (331)
T ss_dssp TTSC
T ss_pred ecCC
Confidence 8754
No 59
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.55 E-value=2.7e-12 Score=117.99 Aligned_cols=233 Identities=13% Similarity=0.213 Sum_probs=143.7
Q ss_pred cCCCceEEEeeCCCeEEEEEc---CCEEEEEEcCCCeEEEEe---ecCCccccceEEcCCCC-EEEEeCCCCeEE-Ec--
Q 018705 51 VNHPEDVSVVVSKGALYTATR---DGWVKYFILHNETLVNWK---HIDSQSLLGLTTTKDGG-VILCDNEKGLLK-VT-- 120 (351)
Q Consensus 51 ~~~pe~i~~d~~~g~lyv~~~---~g~I~~~d~~~g~~~~~~---~~~~~p~~gl~~d~~G~-L~v~d~~~gl~~-~~-- 120 (351)
...|.+++++| +|.+|+... ++.|+.|+..+++.+.+. .....|. +++++++|+ ||++....+.++ ++
T Consensus 39 ~~~p~~~a~sp-dg~l~~~~~~~~~~~v~~~~~~~g~~~~~~~~~~~~~~p~-~~a~spdg~~l~~~~~~~~~v~v~~~~ 116 (347)
T 3hfq_A 39 TQNPTYLALSA-KDCLYSVDKEDDEGGIAAWQIDGQTAHKLNTVVAPGTPPA-YVAVDEARQLVYSANYHKGTAEVMKIA 116 (347)
T ss_dssp CSCCCCEEECT-TCEEEEEEEETTEEEEEEEEEETTEEEEEEEEEEESCCCS-EEEEETTTTEEEEEETTTTEEEEEEEC
T ss_pred cCCcceEEEcc-CCeEEEEEecCCCceEEEEEecCCcEEEeeeeecCCCCCE-EEEECCCCCEEEEEeCCCCEEEEEEeC
Confidence 46799999996 455887765 578999998777655443 2456788 999999997 888875555333 33
Q ss_pred CCC-eEEec---CCC---------CCcccEEEccCCcEEEEeCCCccCCcccccccccccCCceEEEEeCC-CCeEEEee
Q 018705 121 EEG-VEAIV---PDA---------SFTNDVIAASDGTLYFTVASTKYTPTDFYKDMAEGKPYGQLRKYDPK-LKETTVLH 186 (351)
Q Consensus 121 ~~g-~~~l~---~~~---------~~~n~l~~d~dG~ly~t~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~-~~~~~~~~ 186 (351)
.+| .+.+. ... ..+.+++++|||++|+++.. .+.|..|+.+ ++++....
T Consensus 117 ~~g~~~~~~~~~~~~~~p~~~~~~~~~~~~~~spdg~l~v~~~~-----------------~~~v~~~~~~~~g~~~~~~ 179 (347)
T 3hfq_A 117 ADGALTLTDTVQHSGHGPRPEQDGSHIHYTDLTPDNRLAVIDLG-----------------SDKVYVYNVSDAGQLSEQS 179 (347)
T ss_dssp TTSCEEEEEEEECCCCCSSTTCSSCCEEEEEECTTSCEEEEETT-----------------TTEEEEEEECTTSCEEEEE
T ss_pred CCCCeeecceeecCCCCCCccccCCCceEEEECCCCcEEEEeCC-----------------CCEEEEEEECCCCcEEEee
Confidence 355 43322 110 24678999999999888764 3567777765 45554322
Q ss_pred ----cCccccceEEEcCCCCEEEEEecce---e-EEeecCCCCceeEEe--ccCC------CCCCceEECCCCC-EEEEE
Q 018705 187 ----EGFYFANGIALSKNEDFVVVCESWK---R-YWLKGDRAGILDAFI--ENLP------GGPDNINLAPDGS-FWIGL 249 (351)
Q Consensus 187 ----~~~~~~ngi~~~~dg~~lyv~~~~~---~-~~i~~~~~~~~~~~~--~~~~------g~pd~i~~d~~G~-lwva~ 249 (351)
.....|++++++|||+++|+++... + +.+.. ..++.+... ...+ ..|.+++++++|+ ||++.
T Consensus 180 ~~~~~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~~i~~spdG~~l~v~~ 258 (347)
T 3hfq_A 180 VLTMEAGFGPRHLVFSPDGQYAFLAGELSSQIASLKYDT-QTGAFTQLGIVKTIPADYTAHNGAAAIRLSHDGHFLYVSN 258 (347)
T ss_dssp EEECCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEEET-TTTEEEEEEEEESSCTTCCSCCEEEEEEECTTSCEEEEEE
T ss_pred eEEcCCCCCCceEEECCCCCEEEEEeCCCCEEEEEEecC-CCCceEEeeeeeecCCCCCCCCcceeEEECCCCCEEEEEe
Confidence 2234688999999999999976544 2 22332 123322211 1112 1255689999997 77876
Q ss_pred ecCCchhhhhhhcChhHHHHHHhccchhhcccCCCCCCceEEEEEECCCC--eEEEEEECCCCCcccceeEEEEE--CCE
Q 018705 250 IKMNQTGVRAIQKCREKWELLDAYPGLISLLLPMGSDAGARVVKVDGNDG--KIIRDFNDPDATYISFVTSAAEF--DGN 325 (351)
Q Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~g--~~~~~~~~~~g~~~~~~~~~~~~--~g~ 325 (351)
...+ .-.++.+++ +| +.+..+... + ..+..+... +..
T Consensus 259 ~~~~----------------------------------~v~v~~~~~-~g~~~~~~~~~~~-~---~~~~~~~~spdg~~ 299 (347)
T 3hfq_A 259 RGYN----------------------------------TLAVFAVTA-DGHLTLIQQISTE-G---DFPRDFDLDPTEAF 299 (347)
T ss_dssp ETTT----------------------------------EEEEEEECG-GGCEEEEEEEECS-S---SCCCEEEECTTSSE
T ss_pred CCCC----------------------------------EEEEEEECC-CCcEEEeEEEecC-C---CCcCeEEECCCCCE
Confidence 4311 112444444 55 334444332 1 124455543 446
Q ss_pred EEEEecCCCeEEEEeCC
Q 018705 326 LYLASLQSNFIGILPLD 342 (351)
Q Consensus 326 L~ig~~~~~~i~~~~~~ 342 (351)
||+++...+.+..+++.
T Consensus 300 l~v~~~~~~~v~v~~~d 316 (347)
T 3hfq_A 300 VVVVNQNTDNATLYARD 316 (347)
T ss_dssp EEEEETTTTEEEEEEEC
T ss_pred EEEEEcCCCcEEEEEEe
Confidence 99998877888888554
No 60
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=99.55 E-value=3.8e-14 Score=143.35 Aligned_cols=182 Identities=14% Similarity=0.108 Sum_probs=125.2
Q ss_pred cCCCceEEEeeCCCeEEEEE-cCCEEEEEEcCC----CeEEEEe-ecCCccccceEEc-CCCCEEEEeCCC-CeEEEcCC
Q 018705 51 VNHPEDVSVVVSKGALYTAT-RDGWVKYFILHN----ETLVNWK-HIDSQSLLGLTTT-KDGGVILCDNEK-GLLKVTEE 122 (351)
Q Consensus 51 ~~~pe~i~~d~~~g~lyv~~-~~g~I~~~d~~~----g~~~~~~-~~~~~p~~gl~~d-~~G~L~v~d~~~-gl~~~~~~ 122 (351)
+..|++|++++.++.||++. ..++|++++..+ ...+.+. .....|. ||++| ..|+||+++... .|.+++.+
T Consensus 405 ~~~p~gla~d~~~~~Ly~sD~~~~~I~~~~~~g~~~~~~~~~~i~~~~~~P~-glavD~~~g~LY~tD~~~~~I~v~d~d 483 (699)
T 1n7d_A 405 LRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPD-GLAVDWIHSNIYWTDSVLGTVSVADTK 483 (699)
T ss_dssp CTTCCCCEEETTTTEEEECCTTTTSBEEEESCCCCC-CCCCCBCCSCC--CC-CEECCCSSSBCEECCTTTSCEEEEBSS
T ss_pred CcceEEEccccccCeEEEEecCCCeEEEEecCCCCCCcceEEEEeCCCCCcc-eEEEEeeCCcEEEEeccCCeEEEEecC
Confidence 57899999997788887754 567899999854 2222222 2234688 99999 567999998764 56667766
Q ss_pred C--eEEecC-CCCCcccEEEccC-CcEEEEeCCCccCCcccccccccccCCceEEEEeCCCCeEEEe-ecCccccceEEE
Q 018705 123 G--VEAIVP-DASFTNDVIAASD-GTLYFTVASTKYTPTDFYKDMAEGKPYGQLRKYDPKLKETTVL-HEGFYFANGIAL 197 (351)
Q Consensus 123 g--~~~l~~-~~~~~n~l~~d~d-G~ly~t~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~~~~~~~-~~~~~~~ngi~~ 197 (351)
| .+.+.. ....|++|++|++ |.||+++... .++|+++++++...+.+ ...+..||||++
T Consensus 484 g~~~~~l~~~~~~~P~giavDp~~g~ly~td~~~----------------~~~I~~~~~dG~~~~~l~~~~l~~PnGlav 547 (699)
T 1n7d_A 484 GVKRKTLFREQGSKPRAIVVDPVHGFMYWTDWGT----------------PAKIKKGGLNGVDIYSLVTENIQWPNGITL 547 (699)
T ss_dssp SCCEEEECCCSSCCCCCEECCSSSSCCEECCCSS----------------SCCEEBCCSSSCCCCEESCSSCSSCCCEEE
T ss_pred CCceEEEEeCCCCCcceEEEccCCCcEEEcccCC----------------CCeEEEEeCCCCCeeEEEeCCCCCccEEEE
Confidence 6 455543 3478999999985 6899998641 25788888764433333 356789999999
Q ss_pred cCCCCEEEEEecce-eEEeecCCCCceeEEecc--CCCCCCceEECCCCCEEEEEe
Q 018705 198 SKNEDFVVVCESWK-RYWLKGDRAGILDAFIEN--LPGGPDNINLAPDGSFWIGLI 250 (351)
Q Consensus 198 ~~dg~~lyv~~~~~-~~~i~~~~~~~~~~~~~~--~~g~pd~i~~d~~G~lwva~~ 250 (351)
+++++.|||++... +++..+......+.+... ....|+++++|.+ +||++..
T Consensus 548 d~~~~~LY~aD~~~~~I~~~d~dG~~~~~~~~~~~~~~~P~glavd~~-~lywtd~ 602 (699)
T 1n7d_A 548 DLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVFED-KVFWTDI 602 (699)
T ss_dssp CTTTCCEEEEETTTTEEEEECSSSSCCEEECCCSSSCSSCCCCEEETT-EEEEECS
T ss_pred eccCCEEEEEecCCCeEEEEccCCCceEEEEecCCcCCCceEeEEECC-EEEEEeC
Confidence 99887899999876 655544322333444321 2246899999875 6777653
No 61
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=99.55 E-value=1.6e-12 Score=132.46 Aligned_cols=183 Identities=14% Similarity=0.099 Sum_probs=126.4
Q ss_pred cCCCceEEEeeCCCeEEEE-EcCCEEEEEEcCCC----eEEEEe-ecCCccccceEEcCCC-CEEEEeCCCC-eEEEcCC
Q 018705 51 VNHPEDVSVVVSKGALYTA-TRDGWVKYFILHNE----TLVNWK-HIDSQSLLGLTTTKDG-GVILCDNEKG-LLKVTEE 122 (351)
Q Consensus 51 ~~~pe~i~~d~~~g~lyv~-~~~g~I~~~d~~~g----~~~~~~-~~~~~p~~gl~~d~~G-~L~v~d~~~g-l~~~~~~ 122 (351)
+..|.+|++|+.++.||+. ...++|++++..+. ..+.+. .....|. ||++|..+ +||++|...+ |.+++.+
T Consensus 423 ~~~~~gl~~d~~~~~lY~sD~~~~~I~~~~l~g~~~~~~~~~vi~~~l~~P~-GLAvD~~~~~LY~tD~~~~~I~v~~ld 501 (791)
T 3m0c_C 423 LRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPD-GLAVDWIHSNIYWTDSVLGTVSVADTK 501 (791)
T ss_dssp CSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCCC-EEEEETTTTEEEEEETTTTEEEEEETT
T ss_pred CCceEEEeecccCCeeEEeeccceeEEEEeccCCCCCcceeEEEecCCCCcc-eeeeeecCCcEEEEecCCCeEEEEeCC
Confidence 6789999999767877765 45788999998542 222332 2446799 99999765 8999998765 4555566
Q ss_pred C--eEEec-CCCCCcccEEEccC-CcEEEEeCCCccCCcccccccccccCCceEEEEeCCCCeEEEee-cCccccceEEE
Q 018705 123 G--VEAIV-PDASFTNDVIAASD-GTLYFTVASTKYTPTDFYKDMAEGKPYGQLRKYDPKLKETTVLH-EGFYFANGIAL 197 (351)
Q Consensus 123 g--~~~l~-~~~~~~n~l~~d~d-G~ly~t~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~~~~~~~~-~~~~~~ngi~~ 197 (351)
| .+++. .....|++|++|+. |.||+++... .++|+++++++...+.+. ..+..|+||++
T Consensus 502 G~~~~~l~~~~l~~P~gIaVDp~~g~LYwtD~g~----------------~~~I~~~~~dG~~~~~lv~~~l~~P~GLav 565 (791)
T 3m0c_C 502 GVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGT----------------PAKIKKGGLNGVDIYSLVTENIQWPNGITL 565 (791)
T ss_dssp SSSEEEEEECTTCCEEEEEEETTTTEEEEEECSS----------------SCEEEEEETTSCCEEEEECSSCSCEEEEEE
T ss_pred CCeEEEEEeCCCCCcceEEEecCCCCEEEecCCC----------------CCeEEEEecCCCceEEEEeCCCCCceEEEE
Confidence 6 44544 34478999999985 7999999751 257999998865555444 56789999999
Q ss_pred cCCCCEEEEEecce-eEEeecCCCCceeEEecc--CCCCCCceEECCCCCEEEEEec
Q 018705 198 SKNEDFVVVCESWK-RYWLKGDRAGILDAFIEN--LPGGPDNINLAPDGSFWIGLIK 251 (351)
Q Consensus 198 ~~dg~~lyv~~~~~-~~~i~~~~~~~~~~~~~~--~~g~pd~i~~d~~G~lwva~~~ 251 (351)
++.++.|||++... +++..+......+.+... .-..|.+|+++ +++||++...
T Consensus 566 D~~~~~LYwaD~~~~~I~~~d~dG~~~~~v~~~~~~l~~P~glav~-~~~lYwtD~~ 621 (791)
T 3m0c_C 566 DLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVF-EDKVFWTDII 621 (791)
T ss_dssp ETTTTEEEEEETTTTEEEEEETTSCSCEEEEECTTTTSSEEEEEEE-TTEEEEEETT
T ss_pred ecCCCeEEEEeCCCCcEEEEecCCCceEEEecCCCccCCCCEEEEe-CCEEEEEECC
Confidence 98888899999876 665544322233333322 11246677775 4589998743
No 62
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=99.54 E-value=1.3e-12 Score=133.38 Aligned_cols=220 Identities=14% Similarity=0.202 Sum_probs=143.4
Q ss_pred ceEEEeeCCCeEEEEEcCCEEEEEEcCCCeEEEEeec-------CCccccceEEcCCCCEEEEeCCCCeEEEcCC-----
Q 018705 55 EDVSVVVSKGALYTATRDGWVKYFILHNETLVNWKHI-------DSQSLLGLTTTKDGGVILCDNEKGLLKVTEE----- 122 (351)
Q Consensus 55 e~i~~d~~~g~lyv~~~~g~I~~~d~~~g~~~~~~~~-------~~~p~~gl~~d~~G~L~v~d~~~gl~~~~~~----- 122 (351)
.+++.| ++|.||+++ +++|.++++++++++.+... ..... .|..|++|+||+++..+|+++++++
T Consensus 376 ~~i~~d-~~g~lWigt-~~GL~~~~~~~~~~~~~~~~~~~~~~~~~~v~-~i~~d~~g~lWigT~~~Gl~~~~~~~~~~~ 452 (758)
T 3ott_A 376 RHIYED-KEQQLWIAT-DGSINRYDYATRQFIHYNIVDNTGTYNTNWTY-YIFEDTAGQLWISTCLGGIFVVDKHKLMQS 452 (758)
T ss_dssp EEEEEC-TTSCEEEEE-TTEEEEEETTTTEEEEEEEECCC--CBSSSEE-EEEECTTSEEEEEESSSCEEEEEHHHHHHC
T ss_pred EEEEEC-CCCCEEEEe-CCcHhhcCcCCCcEEEeecCCCcCCCCCceEE-EEEEcCCCCEEEEECCCceEEEcccccccc
Confidence 577888 789999999 46799999988888776421 12345 7889999999999988899999842
Q ss_pred --C-e---EEecC--CC--CCcccEEEccCCcEEEEeCCCccCCcccccccccccCCceEEEEeCCCCeEEEeecC-c--
Q 018705 123 --G-V---EAIVP--DA--SFTNDVIAASDGTLYFTVASTKYTPTDFYKDMAEGKPYGQLRKYDPKLKETTVLHEG-F-- 189 (351)
Q Consensus 123 --g-~---~~l~~--~~--~~~n~l~~d~dG~ly~t~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~~~~~~~~~~-~-- 189 (351)
+ . ..+.. .. ..+++|..|++|+||+.... .++|++||+++++++.+... +
T Consensus 453 ~~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~lWi~~~t-----------------~~Gl~~~d~~~~~~~~~~~~~~~~ 515 (758)
T 3ott_A 453 TSGQYIAEQNYSVHNGLSGMFINQIIPDNEGNVWVLLYN-----------------NKGIDKINPRTREVTKLFADELTG 515 (758)
T ss_dssp CSSEEECSEEECGGGTCSCSCEEEEEECTTSCEEEEETT-----------------CSSEEEEETTTTEEEEECTTTSCG
T ss_pred CCcceecccccccccccccceeeeEEEcCCCCEEEEccC-----------------CCCcEEEeCCCCceEEecCCCcCC
Confidence 2 1 12211 11 45788999999999993221 13699999998887765322 1
Q ss_pred -cccceEEEcCCCCEEEEEecceeEEeecCCCCceeEEeccCCCCCC----ceEECCCCCEEEEEecCCchhhhhhhcCh
Q 018705 190 -YFANGIALSKNEDFVVVCESWKRYWLKGDRAGILDAFIENLPGGPD----NINLAPDGSFWIGLIKMNQTGVRAIQKCR 264 (351)
Q Consensus 190 -~~~ngi~~~~dg~~lyv~~~~~~~~i~~~~~~~~~~~~~~~~g~pd----~i~~d~~G~lwva~~~~~~~~~~~~~~~~ 264 (351)
..++++..+++|. ||++...+.+.+. +..++.+.+. ..++|. ++..| +|+||+++..
T Consensus 516 ~~~~~~i~~d~~g~-lWigt~~Gl~~~~-~~~~~~~~~~--~~gl~~~~i~~i~~~-~g~lWi~t~~------------- 577 (758)
T 3ott_A 516 EKSPNYLLCDEDGL-LWVGFHGGVMRIN-PKDESQQSIS--FGSFSNNEILSMTCV-KNSIWVSTTN------------- 577 (758)
T ss_dssp GGCEEEEEECTTSC-EEEEETTEEEEEC-C--CCCCBCC--CCC---CCEEEEEEE-TTEEEEEESS-------------
T ss_pred CcccceEEECCCCC-EEEEecCceEEEe-cCCCceEEec--ccCCCccceEEEEEC-CCCEEEECCC-------------
Confidence 3467888899997 9998866633222 2122222221 112333 34455 8999999753
Q ss_pred hHHHHHHhccchhhcccCCCCCCceEEEEEECCCCeEEEEEECCCCCcccceeEEE-E-ECCEEEEEecCCCeEEEEeCC
Q 018705 265 EKWELLDAYPGLISLLLPMGSDAGARVVKVDGNDGKIIRDFNDPDATYISFVTSAA-E-FDGNLYLASLQSNFIGILPLD 342 (351)
Q Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~g~~~~~~~~~~g~~~~~~~~~~-~-~~g~L~ig~~~~~~i~~~~~~ 342 (351)
++.+||| +...+..+..++.. ++.+. . .+|+||+|+. +++.+++..
T Consensus 578 -------------------------Gl~~~~~-~~~~~~~~~~~~~~----~~~~~~~~~~G~l~fG~~--~Gl~~f~p~ 625 (758)
T 3ott_A 578 -------------------------GLWIIDR-KTMDARQQNMTNKR----FTSLLFDPKEDCVYLGGA--DGFGISHSN 625 (758)
T ss_dssp -------------------------CEEEEET-TTCCEEEC--CCCC----CSEEEEETTTTEEEEECB--SEEEEEEC-
T ss_pred -------------------------CeEEEcC-CCceeEEecCCCCc----eeeeEEECCCCcEEEecC--CceEEEChh
Confidence 5999999 55545555434332 23333 3 3799999995 789999876
Q ss_pred CC
Q 018705 343 GP 344 (351)
Q Consensus 343 ~~ 344 (351)
..
T Consensus 626 ~~ 627 (758)
T 3ott_A 626 LE 627 (758)
T ss_dssp --
T ss_pred hc
Confidence 44
No 63
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=99.53 E-value=6.3e-12 Score=115.89 Aligned_cols=165 Identities=15% Similarity=0.203 Sum_probs=115.0
Q ss_pred CccCceEecCCCcCCCceEEEeeCCCeEEEEEc-CCEEEEEEcCCCeEEEEe-------ecCCccccceEEcC----CCC
Q 018705 39 SMKGLTKLGEGCVNHPEDVSVVVSKGALYTATR-DGWVKYFILHNETLVNWK-------HIDSQSLLGLTTTK----DGG 106 (351)
Q Consensus 39 ~l~~~~~i~~~~~~~pe~i~~d~~~g~lyv~~~-~g~I~~~d~~~g~~~~~~-------~~~~~p~~gl~~d~----~G~ 106 (351)
....+++++++ +..|.+|++.| +|.+|++.. .|+|++++..+++.+.+. .....++ ||++++ +|.
T Consensus 20 ~~~~~~~va~g-L~~P~~ia~~p-dG~llVter~~G~I~~v~~~~g~~~~v~~~~~v~~~g~~Gll-Gia~~Pdf~~~g~ 96 (347)
T 3das_A 20 SVKVLRTVATG-LNSPWGLAPLP-GGDLLVSSRDEATITRVDAKTGRKTELGEVPGVSPSGEGGLL-GIALSPDYASDHM 96 (347)
T ss_dssp CEEEEEEEECC-CSSEEEEEECT-TSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCBTTBSEE-EEEECTTHHHHCE
T ss_pred CCceeEEeecC-CCCceEEEEcC-CCcEEEEEecCCEEEEEECCCCcEeeecccCceeecCCCCce-eeEeccccccCCE
Confidence 44567888887 89999999994 678999887 899999987667654432 1234578 999997 488
Q ss_pred EEEEeC---CCCeEEEcC-C---------CeEEecC----C-CCCcccEEEccCCcEEEEeCCCccCCcccccccccccC
Q 018705 107 VILCDN---EKGLLKVTE-E---------GVEAIVP----D-ASFTNDVIAASDGTLYFTVASTKYTPTDFYKDMAEGKP 168 (351)
Q Consensus 107 L~v~d~---~~gl~~~~~-~---------g~~~l~~----~-~~~~n~l~~d~dG~ly~t~~~~~~~~~~~~~~~~~~~~ 168 (351)
||++.. ...++++.. . ..+++.. . ......|++++||.|||+..... .. ....+ ....
T Consensus 97 lYv~yt~~~~~~v~R~~~~~~~~~~~~~~~~~~i~~~~p~~~~H~g~~l~fgpDG~Lyvt~Gd~~-~~-~~~qd--~~~~ 172 (347)
T 3das_A 97 VYAYFTSASDNRIVRMLYDEKKPSGEQLGAPDTVFRGIPKGVIHNGGRIAFGPDKMLYAGTGESG-DT-GLSQD--RKSL 172 (347)
T ss_dssp EEEEEECSSSEEEEEEEBCTTSCTTCCBCCCEEEEEEECCCSSCCCCCEEECTTSCEEEECBCTT-CG-GGTTC--TTCS
T ss_pred EEEEEecCCCCEEEEEEeCCCCcccccCCCcEEEEEcCCCCCCccCccccCCCCCCEEEEECCCC-CC-ccccC--CCCC
Confidence 999742 346777752 2 1222211 1 15677899999999999975311 00 00000 0123
Q ss_pred CceEEEEeCCCC--------eEEEeecCccccceEEEcCCCCEEEEEecce
Q 018705 169 YGQLRKYDPKLK--------ETTVLHEGFYFANGIALSKNEDFVVVCESWK 211 (351)
Q Consensus 169 ~g~l~~~d~~~~--------~~~~~~~~~~~~ngi~~~~dg~~lyv~~~~~ 211 (351)
.|.|+|+++++. ..+++..++.+|.|++++++|. ||++|.+.
T Consensus 173 ~G~IlRi~~dG~ip~~nPf~~~~i~a~G~RNp~Gla~dp~G~-L~~~d~g~ 222 (347)
T 3das_A 173 GGKILRMTPDGEPAPGNPFPGSPVYSYGHRNVQGLAWDDKQR-LFASEFGQ 222 (347)
T ss_dssp TTCEEEECTTSSBCTTCSSTTCCEEEBCCSBCCEEEECTTCC-EEEEECCS
T ss_pred CCEEEEEeCCCCccCCCCCCCCeEEeeCCCCcceEEECCCCC-EEEEecCC
Confidence 678999998754 3456778899999999999987 99999764
No 64
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.53 E-value=5.5e-11 Score=108.82 Aligned_cols=219 Identities=18% Similarity=0.193 Sum_probs=147.1
Q ss_pred CCCceEEEeeCCCeEEEEEc-CCEEEEEEcCCCeEEEEeec-C-C--------ccccceEEcCCCC-EEEEeC--CCCeE
Q 018705 52 NHPEDVSVVVSKGALYTATR-DGWVKYFILHNETLVNWKHI-D-S--------QSLLGLTTTKDGG-VILCDN--EKGLL 117 (351)
Q Consensus 52 ~~pe~i~~d~~~g~lyv~~~-~g~I~~~d~~~g~~~~~~~~-~-~--------~p~~gl~~d~~G~-L~v~d~--~~gl~ 117 (351)
..|.+++++++++.+|++.. ++.|..+|.++++....... . . .|. +++++++|+ +|+++. ...++
T Consensus 89 ~~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~s~dg~~l~~~~~~~~~~i~ 167 (353)
T 3vgz_A 89 LKPFGATINNTTQTLWFGNTVNSAVTAIDAKTGEVKGRLVLDDRKRTEEVRPLQPR-ELVADDATNTVYISGIGKESVIW 167 (353)
T ss_dssp SCCCSEEEETTTTEEEEEETTTTEEEEEETTTCCEEEEEESCCCCCCSSCCCCEEE-EEEEETTTTEEEEEEESSSCEEE
T ss_pred CCcceEEECCCCCEEEEEecCCCEEEEEeCCCCeeEEEEecCCCccccccCCCCCc-eEEECCCCCEEEEEecCCCceEE
Confidence 45899999977777888765 68999999988876432222 1 1 267 899999986 888873 23477
Q ss_pred EEcC-CC--eEEecCCCCCcccEEEccCCc-EEEEeCCCccCCcccccccccccCCceEEEEeCCCCeEEEeec-----C
Q 018705 118 KVTE-EG--VEAIVPDASFTNDVIAASDGT-LYFTVASTKYTPTDFYKDMAEGKPYGQLRKYDPKLKETTVLHE-----G 188 (351)
Q Consensus 118 ~~~~-~g--~~~l~~~~~~~n~l~~d~dG~-ly~t~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~~~~~~~~~-----~ 188 (351)
.++. ++ ...+......|+++++++||+ +|+++. .+.++.||..+++...... .
T Consensus 168 ~~d~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~------------------~~~i~~~d~~~~~~~~~~~~~~~~~ 229 (353)
T 3vgz_A 168 VVDGGNIKLKTAIQNTGKMSTGLALDSEGKRLYTTNA------------------DGELITIDTADNKILSRKKLLDDGK 229 (353)
T ss_dssp EEETTTTEEEEEECCCCTTCCCCEEETTTTEEEEECT------------------TSEEEEEETTTTEEEEEEECCCSSS
T ss_pred EEcCCCCceEEEecCCCCccceEEECCCCCEEEEEcC------------------CCeEEEEECCCCeEEEEEEcCCCCC
Confidence 7775 55 344432225699999999985 777653 3679999998887654332 1
Q ss_pred ccccceEEEcCCCCEEEEEecce-eEEeecCCCCceeEEeccCCCCCCceEECCCCC-EEEEEecCCchhhhhhhcChhH
Q 018705 189 FYFANGIALSKNEDFVVVCESWK-RYWLKGDRAGILDAFIENLPGGPDNINLAPDGS-FWIGLIKMNQTGVRAIQKCREK 266 (351)
Q Consensus 189 ~~~~ngi~~~~dg~~lyv~~~~~-~~~i~~~~~~~~~~~~~~~~g~pd~i~~d~~G~-lwva~~~~~~~~~~~~~~~~~~ 266 (351)
...+++++++||++.+|+++... .+.+-+...++..... ..+ .+.+++++++|+ +|++...
T Consensus 230 ~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~-~~~-~~~~~~~s~dg~~l~v~~~~--------------- 292 (353)
T 3vgz_A 230 EHFFINISLDTARQRAFITDSKAAEVLVVDTRNGNILAKV-AAP-ESLAVLFNPARNEAYVTHRQ--------------- 292 (353)
T ss_dssp CCCEEEEEEETTTTEEEEEESSSSEEEEEETTTCCEEEEE-ECS-SCCCEEEETTTTEEEEEETT---------------
T ss_pred CcccceEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEE-EcC-CCceEEECCCCCEEEEEECC---------------
Confidence 33577899999999999988664 4443333233322222 122 357799999997 8887642
Q ss_pred HHHHHhccchhhcccCCCCCCceEEEEEECCCCeEEEEEECCCCCcccceeEEEEE--CCEEEEEecC
Q 018705 267 WELLDAYPGLISLLLPMGSDAGARVVKVDGNDGKIIRDFNDPDATYISFVTSAAEF--DGNLYLASLQ 332 (351)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~g~~~~~~~~~~g~~~~~~~~~~~~--~g~L~ig~~~ 332 (351)
.+.|..+|.++++.+..+..+. .+..+... +..||++...
T Consensus 293 ---------------------~~~v~~~d~~~~~~~~~~~~~~-----~~~~~~~s~dg~~l~v~~~~ 334 (353)
T 3vgz_A 293 ---------------------AGKVSVIDAKSYKVVKTFDTPT-----HPNSLALSADGKTLYVSVKQ 334 (353)
T ss_dssp ---------------------TTEEEEEETTTTEEEEEEECCS-----EEEEEEECTTSCEEEEEEEC
T ss_pred ---------------------CCeEEEEECCCCeEEEEEecCC-----CCCeEEEcCCCCEEEEEEcc
Confidence 1368888986788887776432 34555543 4469998864
No 65
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=99.52 E-value=6.3e-11 Score=110.34 Aligned_cols=233 Identities=14% Similarity=0.138 Sum_probs=159.1
Q ss_pred CCCceEEEeeCCCeEEEEE-cCCEEEEEEcCCCeEEEEeecCCccccceEEcCCCC-EEEEeCCCC-eEEEcC-CC--eE
Q 018705 52 NHPEDVSVVVSKGALYTAT-RDGWVKYFILHNETLVNWKHIDSQSLLGLTTTKDGG-VILCDNEKG-LLKVTE-EG--VE 125 (351)
Q Consensus 52 ~~pe~i~~d~~~g~lyv~~-~~g~I~~~d~~~g~~~~~~~~~~~p~~gl~~d~~G~-L~v~d~~~g-l~~~~~-~g--~~ 125 (351)
..+.++++++++..+|++. .++.|..||..+++..........+. +++++++|+ ||++....+ +..++. ++ ..
T Consensus 32 ~~~~~~~~s~dg~~l~~~~~~d~~i~v~d~~~~~~~~~~~~~~~v~-~~~~spdg~~l~~~~~~~~~v~v~d~~~~~~~~ 110 (391)
T 1l0q_A 32 SNPMGAVISPDGTKVYVANAHSNDVSIIDTATNNVIATVPAGSSPQ-GVAVSPDGKQVYVTNMASSTLSVIDTTSNTVAG 110 (391)
T ss_dssp SSEEEEEECTTSSEEEEEEGGGTEEEEEETTTTEEEEEEECSSSEE-EEEECTTSSEEEEEETTTTEEEEEETTTTEEEE
T ss_pred CCcceEEECCCCCEEEEECCCCCeEEEEECCCCeEEEEEECCCCcc-ceEECCCCCEEEEEECCCCEEEEEECCCCeEEE
Confidence 4578999997777776654 78999999998887755444455788 999999996 777776544 555554 55 33
Q ss_pred EecCCCCCcccEEEccCCc-EEEEeCCCccCCcccccccccccCCceEEEEeCCCCeEEEeecCccccceEEEcCCCCEE
Q 018705 126 AIVPDASFTNDVIAASDGT-LYFTVASTKYTPTDFYKDMAEGKPYGQLRKYDPKLKETTVLHEGFYFANGIALSKNEDFV 204 (351)
Q Consensus 126 ~l~~~~~~~n~l~~d~dG~-ly~t~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~~~~~~~~~~~~~~ngi~~~~dg~~l 204 (351)
.+... ..+.+++++++|. +|++... .+.|+.||..+++..........+.+++++++++.+
T Consensus 111 ~~~~~-~~~~~~~~s~dg~~l~~~~~~-----------------~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~dg~~l 172 (391)
T 1l0q_A 111 TVKTG-KSPLGLALSPDGKKLYVTNNG-----------------DKTVSVINTVTKAVINTVSVGRSPKGIAVTPDGTKV 172 (391)
T ss_dssp EEECS-SSEEEEEECTTSSEEEEEETT-----------------TTEEEEEETTTTEEEEEEECCSSEEEEEECTTSSEE
T ss_pred EEeCC-CCcceEEECCCCCEEEEEeCC-----------------CCEEEEEECCCCcEEEEEecCCCcceEEECCCCCEE
Confidence 33332 5789999999995 7787754 468999999888776655555678999999999988
Q ss_pred EEEecce-eEEeecCCCCceeEEeccCCCCCCceEECCCCC-EEEEEecCCchhhhhhhcChhHHHHHHhccchhhcccC
Q 018705 205 VVCESWK-RYWLKGDRAGILDAFIENLPGGPDNINLAPDGS-FWIGLIKMNQTGVRAIQKCREKWELLDAYPGLISLLLP 282 (351)
Q Consensus 205 yv~~~~~-~~~i~~~~~~~~~~~~~~~~g~pd~i~~d~~G~-lwva~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 282 (351)
|++.... .+.+-+...++..... .....+.+++++++|+ +|++...
T Consensus 173 ~~~~~~~~~v~~~d~~~~~~~~~~-~~~~~~~~~~~~~~g~~l~~~~~~------------------------------- 220 (391)
T 1l0q_A 173 YVANFDSMSISVIDTVTNSVIDTV-KVEAAPSGIAVNPEGTKAYVTNVD------------------------------- 220 (391)
T ss_dssp EEEETTTTEEEEEETTTTEEEEEE-ECSSEEEEEEECTTSSEEEEEEEC-------------------------------
T ss_pred EEEeCCCCEEEEEECCCCeEEEEE-ecCCCccceEECCCCCEEEEEecC-------------------------------
Confidence 8876544 3333333233322222 1233467788999996 6666531
Q ss_pred CCCCCceEEEEEECCCCeEEEEEECCCCCcccceeEEEEE--CCEEEEEecCCCeEEEEeCCC
Q 018705 283 MGSDAGARVVKVDGNDGKIIRDFNDPDATYISFVTSAAEF--DGNLYLASLQSNFIGILPLDG 343 (351)
Q Consensus 283 ~~~~~~~~v~~~~~~~g~~~~~~~~~~g~~~~~~~~~~~~--~g~L~ig~~~~~~i~~~~~~~ 343 (351)
...+.|..+|.++++.+..+..+. .+..+... +..||++....+.+..+++.+
T Consensus 221 ---~~~~~v~~~d~~~~~~~~~~~~~~-----~~~~~~~s~dg~~l~~s~~~d~~v~v~d~~~ 275 (391)
T 1l0q_A 221 ---KYFNTVSMIDTGTNKITARIPVGP-----DPAGIAVTPDGKKVYVALSFXNTVSVIDTAT 275 (391)
T ss_dssp ---SSCCEEEEEETTTTEEEEEEECCS-----SEEEEEECTTSSEEEEEETTTTEEEEEETTT
T ss_pred ---cCCCcEEEEECCCCeEEEEEecCC-----CccEEEEccCCCEEEEEcCCCCEEEEEECCC
Confidence 012468888986678777776432 24555544 457888877788899998764
No 66
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=99.50 E-value=4.2e-12 Score=116.05 Aligned_cols=180 Identities=14% Similarity=0.180 Sum_probs=121.5
Q ss_pred CCCceEEEeeCCCeEEEEEcC-----CEEEEEEcCCCeEEEEee---cCCccccceEEcCCCCEEEEeCC-------CCe
Q 018705 52 NHPEDVSVVVSKGALYTATRD-----GWVKYFILHNETLVNWKH---IDSQSLLGLTTTKDGGVILCDNE-------KGL 116 (351)
Q Consensus 52 ~~pe~i~~d~~~g~lyv~~~~-----g~I~~~d~~~g~~~~~~~---~~~~p~~gl~~d~~G~L~v~d~~-------~gl 116 (351)
..|.+++++ .+|.+|++... ++|+++|.++++.+.+.. ....|. ++++|++|++|+++.. .++
T Consensus 87 ~~~~~i~~~-~dg~l~v~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~-~i~~d~~g~l~v~~~~~~~~~~~~~l 164 (333)
T 2dg1_A 87 ANPAAIKIH-KDGRLFVCYLGDFKSTGGIFAATENGDNLQDIIEDLSTAYCID-DMVFDSKGGFYFTDFRGYSTNPLGGV 164 (333)
T ss_dssp SSEEEEEEC-TTSCEEEEECTTSSSCCEEEEECTTSCSCEEEECSSSSCCCEE-EEEECTTSCEEEEECCCBTTBCCEEE
T ss_pred CCcceEEEC-CCCcEEEEeCCCCCCCceEEEEeCCCCEEEEEEccCccCCccc-ceEECCCCCEEEEeccccccCCCceE
Confidence 568899999 56778887654 489999997777653322 234678 9999999999999864 468
Q ss_pred EEEcCC-C-eEEecCCCCCcccEEEccCCc-EEEEeCCCccCCcccccccccccCCceEEEEeCCC-C-eEEEe-----e
Q 018705 117 LKVTEE-G-VEAIVPDASFTNDVIAASDGT-LYFTVASTKYTPTDFYKDMAEGKPYGQLRKYDPKL-K-ETTVL-----H 186 (351)
Q Consensus 117 ~~~~~~-g-~~~l~~~~~~~n~l~~d~dG~-ly~t~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~-~-~~~~~-----~ 186 (351)
++++.+ + .+.+......++++++++||+ +|+++.. .++|++||.++ + ....+ .
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~i~~~~dg~~l~v~~~~-----------------~~~i~~~d~~~~g~~~~~~~~~~~~ 227 (333)
T 2dg1_A 165 YYVSPDFRTVTPIIQNISVANGIALSTDEKVLWVTETT-----------------ANRLHRIALEDDGVTIQPFGATIPY 227 (333)
T ss_dssp EEECTTSCCEEEEEEEESSEEEEEECTTSSEEEEEEGG-----------------GTEEEEEEECTTSSSEEEEEEEEEE
T ss_pred EEEeCCCCEEEEeecCCCcccceEECCCCCEEEEEeCC-----------------CCeEEEEEecCCCcCcccccceEEE
Confidence 888864 4 554433335789999999995 9998754 35788888742 2 23211 1
Q ss_pred --cCccccceEEEcCCCCEEEEEecce-eEEeecCCCCceeEEeccCC--C---CCCceEECCCC-CEEEEEec
Q 018705 187 --EGFYFANGIALSKNEDFVVVCESWK-RYWLKGDRAGILDAFIENLP--G---GPDNINLAPDG-SFWIGLIK 251 (351)
Q Consensus 187 --~~~~~~ngi~~~~dg~~lyv~~~~~-~~~i~~~~~~~~~~~~~~~~--g---~pd~i~~d~~G-~lwva~~~ 251 (351)
.....|++|+++++|+ +|++.... ++.+-+........+..... + .|.+++++++| .||+++..
T Consensus 228 ~~~~~~~~~~i~~d~~G~-l~v~~~~~~~v~~~d~~g~~~~~~~~~~~~~g~~~~~~~~~~~~dg~~L~v~~~~ 300 (333)
T 2dg1_A 228 YFTGHEGPDSCCIDSDDN-LYVAMYGQGRVLVFNKRGYPIGQILIPGRDEGHMLRSTHPQFIPGTNQLIICSND 300 (333)
T ss_dssp ECCSSSEEEEEEEBTTCC-EEEEEETTTEEEEECTTSCEEEEEECTTGGGTCSCBCCEEEECTTSCEEEEEEEC
T ss_pred ecCCCCCCCceEECCCCC-EEEEEcCCCEEEEECCCCCEEEEEEcCCCccccccCcceEEECCCCCEEEEEeCc
Confidence 1224789999999998 99987543 33333332222233321111 1 57889999886 69998765
No 67
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=99.50 E-value=1.1e-12 Score=133.90 Aligned_cols=224 Identities=13% Similarity=0.167 Sum_probs=144.6
Q ss_pred ceEEEeeCCCeEEEEEcCCEEEEEEcCCC---eEEEEee-------cCCccccceEEcCCCCEEEEeCCCCeEEEcC-CC
Q 018705 55 EDVSVVVSKGALYTATRDGWVKYFILHNE---TLVNWKH-------IDSQSLLGLTTTKDGGVILCDNEKGLLKVTE-EG 123 (351)
Q Consensus 55 e~i~~d~~~g~lyv~~~~g~I~~~d~~~g---~~~~~~~-------~~~~p~~gl~~d~~G~L~v~d~~~gl~~~~~-~g 123 (351)
.+++.| ++|.+|+|+.+ +++++++.++ +++.+.. ...... .|..|++|+||+++. .|+.++++ ++
T Consensus 327 ~~i~~D-~~g~lWiGt~~-Gl~~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~-~i~~d~~g~lWigt~-~GL~~~~~~~~ 402 (758)
T 3ott_A 327 YSLFRD-SKGFYWFGGAN-GLIRFTDPAGERHDAIWYRMGDKTYPLSHNRIR-HIYEDKEQQLWIATD-GSINRYDYATR 402 (758)
T ss_dssp EEEEEC-TTCCEEEEETT-EEEEESCTTSSCCCCEEECTTCSSSCCSCSCEE-EEEECTTSCEEEEET-TEEEEEETTTT
T ss_pred EEEEEc-CCCCEEEeeCC-cceeecccccccceeEEeccCCcCCCCCCCceE-EEEECCCCCEEEEeC-CcHhhcCcCCC
Confidence 467788 78999999964 6999987654 2333321 112345 788999999999994 59999996 55
Q ss_pred -eEEec--CC-----CCCcccEEEccCCcEEEEeCCCccCCcccccccccccCCceEEEEeCCC------CeEE---Ee-
Q 018705 124 -VEAIV--PD-----ASFTNDVIAASDGTLYFTVASTKYTPTDFYKDMAEGKPYGQLRKYDPKL------KETT---VL- 185 (351)
Q Consensus 124 -~~~l~--~~-----~~~~n~l~~d~dG~ly~t~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~------~~~~---~~- 185 (351)
.+.+. .. ...+.+++.|++|+||++... ++|++||+++ +... .+
T Consensus 403 ~~~~~~~~~~~~~~~~~~v~~i~~d~~g~lWigT~~------------------~Gl~~~~~~~~~~~~~~~~~~~~~~~ 464 (758)
T 3ott_A 403 QFIHYNIVDNTGTYNTNWTYYIFEDTAGQLWISTCL------------------GGIFVVDKHKLMQSTSGQYIAEQNYS 464 (758)
T ss_dssp EEEEEEEECCC--CBSSSEEEEEECTTSEEEEEESS------------------SCEEEEEHHHHHHCCSSEEECSEEEC
T ss_pred cEEEeecCCCcCCCCCceEEEEEEcCCCCEEEEECC------------------CceEEEccccccccCCcceecccccc
Confidence 55443 11 145678899999999998753 4688988652 1221 11
Q ss_pred -ecCcc--ccceEEEcCCCCEEEE--EecceeEEeecCCCCceeEEec-cCC--CCCCceEECCCCCEEEEEecCCchhh
Q 018705 186 -HEGFY--FANGIALSKNEDFVVV--CESWKRYWLKGDRAGILDAFIE-NLP--GGPDNINLAPDGSFWIGLIKMNQTGV 257 (351)
Q Consensus 186 -~~~~~--~~ngi~~~~dg~~lyv--~~~~~~~~i~~~~~~~~~~~~~-~~~--g~pd~i~~d~~G~lwva~~~~~~~~~ 257 (351)
..++. ....|..+++|+ ||+ +...+.+.++ +..++.+.+.. .+. ..+..+..|++|+||+++..
T Consensus 465 ~~~~l~~~~i~~i~~d~~g~-lWi~~~t~~Gl~~~d-~~~~~~~~~~~~~~~~~~~~~~i~~d~~g~lWigt~~------ 536 (758)
T 3ott_A 465 VHNGLSGMFINQIIPDNEGN-VWVLLYNNKGIDKIN-PRTREVTKLFADELTGEKSPNYLLCDEDGLLWVGFHG------ 536 (758)
T ss_dssp GGGTCSCSCEEEEEECTTSC-EEEEETTCSSEEEEE-TTTTEEEEECTTTSCGGGCEEEEEECTTSCEEEEETT------
T ss_pred cccccccceeeeEEEcCCCC-EEEEccCCCCcEEEe-CCCCceEEecCCCcCCCcccceEEECCCCCEEEEecC------
Confidence 11221 245688899987 998 4433333333 22344444321 111 13355788999999999642
Q ss_pred hhhhcChhHHHHHHhccchhhcccCCCCCCceEEEEEECCCCeEEEEEECCCCCcccceeEEEEECCEEEEEecCCCeEE
Q 018705 258 RAIQKCREKWELLDAYPGLISLLLPMGSDAGARVVKVDGNDGKIIRDFNDPDATYISFVTSAAEFDGNLYLASLQSNFIG 337 (351)
Q Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~g~~~~~~~~~~g~~~~~~~~~~~~~g~L~ig~~~~~~i~ 337 (351)
++.+++| +.+.+..+. .++.+...+.++.+++|+||+++ ..+|.
T Consensus 537 --------------------------------Gl~~~~~-~~~~~~~~~-~~gl~~~~i~~i~~~~g~lWi~t--~~Gl~ 580 (758)
T 3ott_A 537 --------------------------------GVMRINP-KDESQQSIS-FGSFSNNEILSMTCVKNSIWVST--TNGLW 580 (758)
T ss_dssp --------------------------------EEEEECC---CCCCBCC-CCC---CCEEEEEEETTEEEEEE--SSCEE
T ss_pred --------------------------------ceEEEec-CCCceEEec-ccCCCccceEEEEECCCCEEEEC--CCCeE
Confidence 6999999 555455553 24555566788888899999999 57899
Q ss_pred EEeCCCC
Q 018705 338 ILPLDGP 344 (351)
Q Consensus 338 ~~~~~~~ 344 (351)
+++..+.
T Consensus 581 ~~~~~~~ 587 (758)
T 3ott_A 581 IIDRKTM 587 (758)
T ss_dssp EEETTTC
T ss_pred EEcCCCc
Confidence 9987643
No 68
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=99.49 E-value=3.2e-12 Score=116.37 Aligned_cols=214 Identities=13% Similarity=0.138 Sum_probs=125.1
Q ss_pred eEEEeeCCCeEEEEEcCCEEEEEEcCCCeEE-EEeecCCccccceEEcCCCCEEEEeCCCCeEEEcCCC-e-EEecCCCC
Q 018705 56 DVSVVVSKGALYTATRDGWVKYFILHNETLV-NWKHIDSQSLLGLTTTKDGGVILCDNEKGLLKVTEEG-V-EAIVPDAS 132 (351)
Q Consensus 56 ~i~~d~~~g~lyv~~~~g~I~~~d~~~g~~~-~~~~~~~~p~~gl~~d~~G~L~v~d~~~gl~~~~~~g-~-~~l~~~~~ 132 (351)
+++.+ .++.+|+++.+ |+++|+ +|+.. .+........ ..+++ +|+||++...+++++++++| . ........
T Consensus 64 ~~~~~-~~g~l~v~t~~--l~~~d~-~g~~~~~~~~~~~~~~-~~~~~-~~~l~v~t~~~~l~~~d~~g~~~~~~~~~~~ 137 (330)
T 3hxj_A 64 RPSIG-KDGTIYFGSDK--VYAINP-DGTEKWRFDTKKAIVS-DFTIF-EDILYVTSMDGHLYAINTDGTEKWRFKTKKA 137 (330)
T ss_dssp CCEET-TTTEECCSSCE--EEEECC-CGGGGGGSCC-----C-CEEEE-TTEEEEECTTSEEEEECTTSCEEEEEECSSC
T ss_pred ceEEe-cCCcEEEecCc--EEEECC-CCcEEEEEECCCCccc-CceEE-CCEEEEEecCCEEEEEcCCCCEEEEEcCCCc
Confidence 44555 46677776554 777765 44321 1111111111 23333 66777777666677777545 2 22222223
Q ss_pred CcccEEEccCCcEEEEeCCCccCCcccccccccccCCceEEEEeCCCCeEEE-eecCccccceEEEcCCCCEEEEEecce
Q 018705 133 FTNDVIAASDGTLYFTVASTKYTPTDFYKDMAEGKPYGQLRKYDPKLKETTV-LHEGFYFANGIALSKNEDFVVVCESWK 211 (351)
Q Consensus 133 ~~n~l~~d~dG~ly~t~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~~~~~~-~~~~~~~~ngi~~~~dg~~lyv~~~~~ 211 (351)
....++++++|++|++.. .++|++||++ ++... ..........+++++++. +|++. .+
T Consensus 138 ~~~~~~~~~~g~l~vgt~------------------~~~l~~~d~~-g~~~~~~~~~~~~~~~~~~d~~g~-l~v~t-~~ 196 (330)
T 3hxj_A 138 IYATPIVSEDGTIYVGSN------------------DNYLYAINPD-GTEKWRFKTNDAITSAASIGKDGT-IYFGS-DK 196 (330)
T ss_dssp CCSCCEECTTSCEEEECT------------------TSEEEEECTT-SCEEEEEECSSCCCSCCEECTTCC-EEEES-SS
T ss_pred eeeeeEEcCCCEEEEEcC------------------CCEEEEECCC-CCEeEEEecCCCceeeeEEcCCCE-EEEEe-CE
Confidence 455667777777777653 3689999988 55432 222233455677888887 99988 54
Q ss_pred eEEeecCCCCceeEEeccCCCCCCceEECCCCCEEEEEecCCchhhhhhhcChhHHHHHHhccchhhcccCCCCCCceEE
Q 018705 212 RYWLKGDRAGILDAFIENLPGGPDNINLAPDGSFWIGLIKMNQTGVRAIQKCREKWELLDAYPGLISLLLPMGSDAGARV 291 (351)
Q Consensus 212 ~~~i~~~~~~~~~~~~~~~~g~pd~i~~d~~G~lwva~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 291 (351)
.+.++ . .++..............++.|++|++|+++.. +++
T Consensus 197 l~~~d-~-~g~~~~~~~~~~~~~~~~~~~~~g~l~v~t~~-------------------------------------~gl 237 (330)
T 3hxj_A 197 VYAIN-P-DGTEKWNFYAGYWTVTRPAISEDGTIYVTSLD-------------------------------------GHL 237 (330)
T ss_dssp EEEEC-T-TSCEEEEECCSSCCCSCCEECTTSCEEEEETT-------------------------------------TEE
T ss_pred EEEEC-C-CCcEEEEEccCCcceeceEECCCCeEEEEcCC-------------------------------------CeE
Confidence 44444 2 23322111111123566889999999999653 378
Q ss_pred EEEECCCCeEEEEEECCCCCcccceeEEEEE-CCEEEEEecCCCeEEEEeC
Q 018705 292 VKVDGNDGKIIRDFNDPDATYISFVTSAAEF-DGNLYLASLQSNFIGILPL 341 (351)
Q Consensus 292 ~~~~~~~g~~~~~~~~~~g~~~~~~~~~~~~-~g~L~ig~~~~~~i~~~~~ 341 (351)
.++++ +|+.+..+..+.+. .+++..+ +|+||+++. .++|.+++.
T Consensus 238 ~~~~~-~g~~~~~~~~~~~~----~~~~~~~~~g~l~v~t~-~ggl~~~d~ 282 (330)
T 3hxj_A 238 YAINP-DGTEKWRFKTGKRI----ESSPVIGNTDTIYFGSY-DGHLYAINP 282 (330)
T ss_dssp EEECT-TSCEEEEEECSSCC----CSCCEECTTSCEEEECT-TCEEEEECT
T ss_pred EEECC-CCCEeEEeeCCCCc----cccceEcCCCeEEEecC-CCCEEEECC
Confidence 99999 99988777654322 2333444 789999996 558999985
No 69
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=99.48 E-value=6.6e-13 Score=134.25 Aligned_cols=222 Identities=13% Similarity=0.113 Sum_probs=148.5
Q ss_pred CeEEEEEcCCEEEEEEcCCCeEEEEeecCCccccceEEcC-CCCEEEEeCCC-CeEEEcCCC------eEEec-CCCCCc
Q 018705 64 GALYTATRDGWVKYFILHNETLVNWKHIDSQSLLGLTTTK-DGGVILCDNEK-GLLKVTEEG------VEAIV-PDASFT 134 (351)
Q Consensus 64 g~lyv~~~~g~I~~~d~~~g~~~~~~~~~~~p~~gl~~d~-~G~L~v~d~~~-gl~~~~~~g------~~~l~-~~~~~~ 134 (351)
..|+++.. +.|.+++..+++...+.....+|. +|++|+ +++||++|... .|++++.++ ...+. .....|
T Consensus 378 ~~ll~~~~-~~I~~id~~~~~~~~~~~~~~~p~-gla~d~~~~~Ly~sD~~~~~I~~~~~~g~~~~~~~~~~i~~~~~~P 455 (699)
T 1n7d_A 378 AYLFFTNR-HEVRKMTLDRSEYTSLIPNLRNVV-ALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAP 455 (699)
T ss_dssp CCBCCCCT-TC-CEECTTSCCEECCSCCCTTCC-CCEEETTTTEEEECCTTTTSBEEEESCCCCC-CCCCCBCCSCC--C
T ss_pred eeEEecCc-cceEEEeCCCCcceeeeccCcceE-EEccccccCeEEEEecCCCeEEEEecCCCCCCcceEEEEeCCCCCc
Confidence 44555444 458899887666665555567899 999996 56899998764 577777432 22222 233679
Q ss_pred ccEEEcc-CCcEEEEeCCCccCCcccccccccccCCceEEEEeCCCCeEEEee-cCccccceEEEcCCCCEEEEEecce-
Q 018705 135 NDVIAAS-DGTLYFTVASTKYTPTDFYKDMAEGKPYGQLRKYDPKLKETTVLH-EGFYFANGIALSKNEDFVVVCESWK- 211 (351)
Q Consensus 135 n~l~~d~-dG~ly~t~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~~~~~~~~-~~~~~~ngi~~~~dg~~lyv~~~~~- 211 (351)
.+|++|+ .|+||+++.. .++|.+++++++..+.+. ..+..|+||++++++..||+++...
T Consensus 456 ~glavD~~~g~LY~tD~~-----------------~~~I~v~d~dg~~~~~l~~~~~~~P~giavDp~~g~ly~td~~~~ 518 (699)
T 1n7d_A 456 DGLAVDWIHSNIYWTDSV-----------------LGTVSVADTKGVKRKTLFREQGSKPRAIVVDPVHGFMYWTDWGTP 518 (699)
T ss_dssp CCEECCCSSSBCEECCTT-----------------TSCEEEEBSSSCCEEEECCCSSCCCCCEECCSSSSCCEECCCSSS
T ss_pred ceEEEEeeCCcEEEEecc-----------------CCeEEEEecCCCceEEEEeCCCCCcceEEEccCCCcEEEcccCCC
Confidence 9999995 5789999865 457999998866655554 4578899999999777799998653
Q ss_pred -eEEeecCCCCceeEEeccCCCCCCceEECCC-CCEEEEEecCCchhhhhhhcChhHHHHHHhccchhhcccCCCCCCce
Q 018705 212 -RYWLKGDRAGILDAFIENLPGGPDNINLAPD-GSFWIGLIKMNQTGVRAIQKCREKWELLDAYPGLISLLLPMGSDAGA 289 (351)
Q Consensus 212 -~~~i~~~~~~~~~~~~~~~~g~pd~i~~d~~-G~lwva~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 289 (351)
++...+......+.+....-..|.||++|++ ++||++.... .
T Consensus 519 ~~I~~~~~dG~~~~~l~~~~l~~PnGlavd~~~~~LY~aD~~~------------------------------------~ 562 (699)
T 1n7d_A 519 AKIKKGGLNGVDIYSLVTENIQWPNGITLDLLSGRLYWVDSKL------------------------------------H 562 (699)
T ss_dssp CCEEBCCSSSCCCCEESCSSCSSCCCEEECTTTCCEEEEETTT------------------------------------T
T ss_pred CeEEEEeCCCCCeeEEEeCCCCCccEEEEeccCCEEEEEecCC------------------------------------C
Confidence 5554332212223333222246999999965 6899987431 3
Q ss_pred EEEEEECCCCeEEEEEECCCCCcccceeEEEEECCEEEEEecCCCeEEEEeCC
Q 018705 290 RVVKVDGNDGKIIRDFNDPDATYISFVTSAAEFDGNLYLASLQSNFIGILPLD 342 (351)
Q Consensus 290 ~v~~~~~~~g~~~~~~~~~~g~~~~~~~~~~~~~g~L~ig~~~~~~i~~~~~~ 342 (351)
.|.+++. +|.....+....+ ......++..++++||+.....+.|.+++..
T Consensus 563 ~I~~~d~-dG~~~~~~~~~~~-~~~~P~glavd~~~lywtd~~~~~V~~~d~~ 613 (699)
T 1n7d_A 563 SISSIDV-NGGNRKTILEDEK-RLAHPFSLAVFEDKVFWTDIINEAIFSANRL 613 (699)
T ss_dssp EEEEECS-SSSCCEEECCCSS-SCSSCCCCEEETTEEEEECSTTTCEEEEETT
T ss_pred eEEEEcc-CCCceEEEEecCC-cCCCceEeEEECCEEEEEeCCCCeEEEEEcc
Confidence 5888998 8755444432111 1234555666788999999999999999853
No 70
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=99.47 E-value=7.3e-12 Score=113.61 Aligned_cols=179 Identities=9% Similarity=0.079 Sum_probs=121.4
Q ss_pred CCCceEEEeeCCCeEEEEEc-CCEEEEEEcCCCeEEEEeec-----CCccccceEEcCCCCEEEEeC-------------
Q 018705 52 NHPEDVSVVVSKGALYTATR-DGWVKYFILHNETLVNWKHI-----DSQSLLGLTTTKDGGVILCDN------------- 112 (351)
Q Consensus 52 ~~pe~i~~d~~~g~lyv~~~-~g~I~~~d~~~g~~~~~~~~-----~~~p~~gl~~d~~G~L~v~d~------------- 112 (351)
..|.++++| .+|++|++.. +++|++++.+ |+++.+... ...|+ .+++|++|++|++|.
T Consensus 86 ~~~~gl~~d-~dG~l~v~~~~~~~v~~~~~~-g~~~~~~~~~~~~~~~~~~-~i~~d~dG~l~~td~~~g~~~~~~~~~~ 162 (305)
T 3dr2_A 86 AFTNGNAVD-AQQRLVHCEHGRRAITRSDAD-GQAHLLVGRYAGKRLNSPN-DLIVARDGAIWFTDPPFGLRKPSQGCPA 162 (305)
T ss_dssp SCEEEEEEC-TTSCEEEEETTTTEEEEECTT-SCEEEEECEETTEECSCCC-CEEECTTSCEEEECCSGGGSCGGGSCCC
T ss_pred CccceeeEC-CCCCEEEEECCCCEEEEECCC-CCEEEEEeccCCCccCCCC-CEEECCCCCEEEeCcCCCcccccccccc
Confidence 468899999 5677888775 4789999984 777655321 24578 999999999999753
Q ss_pred -----CCCeEEEcC-CC-eEEecCCCCCcccEEEccCCc-EEEEeCCCccCCcccccccccccCCceEEEEeCCCCeE--
Q 018705 113 -----EKGLLKVTE-EG-VEAIVPDASFTNDVIAASDGT-LYFTVASTKYTPTDFYKDMAEGKPYGQLRKYDPKLKET-- 182 (351)
Q Consensus 113 -----~~gl~~~~~-~g-~~~l~~~~~~~n~l~~d~dG~-ly~t~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~~~~-- 182 (351)
..+++++++ +| .+.+. ....||++++++||+ +|++++.... ...++|++|+.+++.+
T Consensus 163 ~~~~~~~~v~~~d~~~g~~~~~~-~~~~p~gl~~spdg~~lyv~~~~~~~------------~~~~~i~~~~~~~~~l~~ 229 (305)
T 3dr2_A 163 DPELAHHSVYRLPPDGSPLQRMA-DLDHPNGLAFSPDEQTLYVSQTPEQG------------HGSVEITAFAWRDGALHD 229 (305)
T ss_dssp CCSSSCEEEEEECSSSCCCEEEE-EESSEEEEEECTTSSEEEEEECCC---------------CCCEEEEEEEETTEEEE
T ss_pred ccccCCCeEEEEcCCCCcEEEEe-cCCCCcceEEcCCCCEEEEEecCCcC------------CCCCEEEEEEecCCCccC
Confidence 246899996 67 66555 557899999999995 9999864110 0124788888654432
Q ss_pred -EEeec-CccccceEEEcCCCCEEEEEecceeEEeecCCCCceeEEeccCCCCCCceEECCCC-CEEEEEe
Q 018705 183 -TVLHE-GFYFANGIALSKNEDFVVVCESWKRYWLKGDRAGILDAFIENLPGGPDNINLAPDG-SFWIGLI 250 (351)
Q Consensus 183 -~~~~~-~~~~~ngi~~~~dg~~lyv~~~~~~~~i~~~~~~~~~~~~~~~~g~pd~i~~d~~G-~lwva~~ 250 (351)
+.+.. ....|+||+++++|+ ||++...+.+.++ +.......+. .+..+.+++++++| .||+++.
T Consensus 230 ~~~~~~~~~~~pdgi~~d~~G~-lwv~~~~gv~~~~-~~g~~~~~~~--~~~~~~~~~f~~d~~~L~it~~ 296 (305)
T 3dr2_A 230 RRHFASVPDGLPDGFCVDRGGW-LWSSSGTGVCVFD-SDGQLLGHIP--TPGTASNCTFDQAQQRLFITGG 296 (305)
T ss_dssp EEEEECCSSSCCCSEEECTTSC-EEECCSSEEEEEC-TTSCEEEEEE--CSSCCCEEEECTTSCEEEEEET
T ss_pred CeEEEECCCCCCCeEEECCCCC-EEEecCCcEEEEC-CCCCEEEEEE--CCCceeEEEEeCCCCEEEEEcC
Confidence 12221 235689999999998 9998855422222 2212222222 33357889998777 5999875
No 71
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=99.47 E-value=4.4e-12 Score=117.97 Aligned_cols=162 Identities=13% Similarity=0.184 Sum_probs=109.0
Q ss_pred CceEecCCCcCCCceEEEeeCCCe-EEEEEcCCEEEEEEcCCCeEE-EEe-------ecCCccccceEEcC----CCCEE
Q 018705 42 GLTKLGEGCVNHPEDVSVVVSKGA-LYTATRDGWVKYFILHNETLV-NWK-------HIDSQSLLGLTTTK----DGGVI 108 (351)
Q Consensus 42 ~~~~i~~~~~~~pe~i~~d~~~g~-lyv~~~~g~I~~~d~~~g~~~-~~~-------~~~~~p~~gl~~d~----~G~L~ 108 (351)
.+++++.+ +..|.+|+++| +|. +||+...|+|++++. +++.. .+. .....++ +|++++ +|.||
T Consensus 9 ~~~~va~~-l~~P~~i~~~p-dG~~l~V~e~~G~i~~~~~-~g~~~~~~~~~~~v~~~g~~g~~-gia~~pdf~~~g~lY 84 (353)
T 2g8s_A 9 NVEVLQDK-LDHPWALAFLP-DNHGMLITLRGGELRHWQA-GKGLSAPLSGVPDVWAHGQGGLL-DVVLAPDFAQSRRIW 84 (353)
T ss_dssp EEEEEEEE-ESSEEEEEECS-TTCCEEEEETTTEEEEEET-TTEECCCCBSCCCCCCSTTCSEE-EEEECTTHHHHCEEE
T ss_pred EEEEEECC-CCCcEEEEEcC-CCCEEEEEeCCceEEEEeC-CCceeeEecCCcccccCCCCCce-eEEECCCCCCCCEEE
Confidence 34666665 78999999995 667 999999999999997 55542 121 1123567 999998 58999
Q ss_pred EEeCC--------CCeEEEcC--C-C----eEEecCC-------CCCcccEEEccCCcEEEEeCCCccCCcccccccccc
Q 018705 109 LCDNE--------KGLLKVTE--E-G----VEAIVPD-------ASFTNDVIAASDGTLYFTVASTKYTPTDFYKDMAEG 166 (351)
Q Consensus 109 v~d~~--------~gl~~~~~--~-g----~~~l~~~-------~~~~n~l~~d~dG~ly~t~~~~~~~~~~~~~~~~~~ 166 (351)
++... ..++++.. + + .+++... ...+++|++++||.||++...... .....+ ..
T Consensus 85 v~~~~~~~~g~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~Gd~~~--~~~~q~--~~ 160 (353)
T 2g8s_A 85 LSYSEVGDDGKAGTAVGYGRLSDDLSKVTDFRTVFRQMPKLSTGNHFGGRLVFDGKGYLFIALGENNQ--RPTAQD--LD 160 (353)
T ss_dssp EEEEEECSSSCEEEEEEEEEECTTSSBEEEEEEEEECSSCCBSSSCCCCCEEECSSSEEEEEECCTTC--GGGGGC--TT
T ss_pred EEEeCCCCCCCceeEEEEEEECCCCCCCCceEEEEEECCCCCCCcccCccEEECCCCcEEEEECCCCC--CCccCC--CC
Confidence 98643 24666652 2 2 2222111 145889999999999999854211 000000 01
Q ss_pred cCCceEEEEeCCCC-------------eEEEeecCccccceEEEcCCCCEEEEEecce
Q 018705 167 KPYGQLRKYDPKLK-------------ETTVLHEGFYFANGIALSKNEDFVVVCESWK 211 (351)
Q Consensus 167 ~~~g~l~~~d~~~~-------------~~~~~~~~~~~~ngi~~~~dg~~lyv~~~~~ 211 (351)
...|+|+|+++++. ..+.+..++..|.|++++++...||+++.+.
T Consensus 161 ~~~g~I~ri~~dG~~p~~npf~~~~~~~~~i~a~G~rnp~gl~~d~~~g~l~~~d~g~ 218 (353)
T 2g8s_A 161 KLQGKLVRLTDQGEIPDDNPFIKESGVRAEIWSYGIRNPQGMAMNPWSNALWLNEHGP 218 (353)
T ss_dssp SCTTEEEEEETTSCCCTTCTTTTSTTSCTTEEEECCSEEEEEEEETTTTEEEEEEECS
T ss_pred CCCeEEEEECCCCCCCCCCCCcCCCCCCccEEEEcCcCccceEEECCCCCEEEEecCC
Confidence 23578999998753 3456677888999999999444599999763
No 72
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=99.45 E-value=4.7e-12 Score=120.92 Aligned_cols=180 Identities=9% Similarity=0.112 Sum_probs=120.3
Q ss_pred CcCCCceEEEeeCCCeEEEEEcC-----CEEEEEEcCCCeEE---EEeecCCccccceEEcC-CCCEEEEeCCC-CeEEE
Q 018705 50 CVNHPEDVSVVVSKGALYTATRD-----GWVKYFILHNETLV---NWKHIDSQSLLGLTTTK-DGGVILCDNEK-GLLKV 119 (351)
Q Consensus 50 ~~~~pe~i~~d~~~g~lyv~~~~-----g~I~~~d~~~g~~~---~~~~~~~~p~~gl~~d~-~G~L~v~d~~~-gl~~~ 119 (351)
....|.+|++|++++.+|++... ..++.++. ++.+. .+ .....|. ++++|+ +|+||+++... .++++
T Consensus 177 ~~~~P~~ia~d~~G~~lyvad~~~~~~~~~v~~~~~-~g~~~~~~~l-~~~~~p~-giavdp~~g~lyv~d~~~~~V~~~ 253 (430)
T 3tc9_A 177 GLSKVRTICWTHEADSMIITNDQNNNDRPNNYILTR-ESGFKVITEL-TKGQNCN-GAETHPINGELYFNSWNAGQVFRY 253 (430)
T ss_dssp CCSCEEEEEECTTSSEEEEEECCSCTTSEEEEEEEG-GGTSCSEEEE-EECSSCC-CEEECTTTCCEEEEETTTTEEEEE
T ss_pred CCCCcceEEEeCCCCEEEEEeCCCCcccceEEEEeC-CCceeeeeee-ccCCCce-EEEEeCCCCEEEEEECCCCEEEEE
Confidence 36789999999766669987752 25777776 44332 22 2346799 999999 89999999765 57778
Q ss_pred cCCC--eEEec-CC-CCCcccEEEccCCc-EEEEeCCCccCCcccccccccccCCceEEEEeCC--CCeE---EEeec--
Q 018705 120 TEEG--VEAIV-PD-ASFTNDVIAASDGT-LYFTVASTKYTPTDFYKDMAEGKPYGQLRKYDPK--LKET---TVLHE-- 187 (351)
Q Consensus 120 ~~~g--~~~l~-~~-~~~~n~l~~d~dG~-ly~t~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~--~~~~---~~~~~-- 187 (351)
+.++ ...+. .. ...|++|+++++|+ +|+++.. .++|++++.+ ++++ ..+..
T Consensus 254 ~~~~~~~~~~~~~~~~~~P~gia~~pdG~~lyv~d~~-----------------~~~I~~~~~d~~~~~~~~~~~~ag~~ 316 (430)
T 3tc9_A 254 DFTTQETTPLFTIQDSGWEFHIQFHPSGNYAYIVVVN-----------------QHYILRSDYDWKTKRLTTPYIVCGQQ 316 (430)
T ss_dssp ETTTTEEEEEEECSSSSCCEEEEECTTSSEEEEEETT-----------------TTEEEEEEEETTTTEECCCEEEEECT
T ss_pred ECCCCcEEEEEEcCCCCcceeEEEcCCCCEEEEEECC-----------------CCEEEEEeCCcccccccceEEEeccC
Confidence 7754 42332 22 25799999999997 9999975 3577776543 2332 12221
Q ss_pred -------------Cccccc-eEEEc--------CCCCEEEEEecce-eEEeecCCCCceeEEecc----C----C-----
Q 018705 188 -------------GFYFAN-GIALS--------KNEDFVVVCESWK-RYWLKGDRAGILDAFIEN----L----P----- 231 (351)
Q Consensus 188 -------------~~~~~n-gi~~~--------~dg~~lyv~~~~~-~~~i~~~~~~~~~~~~~~----~----~----- 231 (351)
.+..|+ |++++ ++| .|||++..+ ++..-++ .|....++.. . .
T Consensus 317 g~~g~~dg~~~~a~~~~P~~gv~v~~~~y~~~D~~g-~lyvaD~~n~~I~~i~~-~G~v~~~~g~g~~~~~G~~dG~~~~ 394 (430)
T 3tc9_A 317 GAKDWVDGVGKKARMHAPRQGTFVKNPAYKGSSDEY-DFYFCDRENHCIRILTP-QGRVTTFAGRGSNGTSGYNDGDLRQ 394 (430)
T ss_dssp TCBCCBCEEGGGCBBSSEEEEEEEECGGGTTSSCCE-EEEEEEGGGTEEEEECT-TSEEEEEEECCTTSSSSCBCEETTT
T ss_pred CCCCCCCCCCcceEeCCCcceEEEccccccccCCCC-eEEEEECCCcEEEEECC-CCcEEEEEeCCCCCCCcccCCCchh
Confidence 255788 88885 445 499999887 6655432 3454444321 0 1
Q ss_pred ----CCCCceEECC-CCCEEEEEec
Q 018705 232 ----GGPDNINLAP-DGSFWIGLIK 251 (351)
Q Consensus 232 ----g~pd~i~~d~-~G~lwva~~~ 251 (351)
..|.++++|+ +|+|||+...
T Consensus 395 ~~~~~~P~giavd~~~g~lyVaD~~ 419 (430)
T 3tc9_A 395 EARFNHPEGIVYDEERECFFIGDRE 419 (430)
T ss_dssp TCBCSSEEEEEEETTTTEEEEEEGG
T ss_pred hcEeCCCcEEEEECCCCEEEEEECC
Confidence 1588999998 6899999754
No 73
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=99.44 E-value=1.6e-11 Score=117.28 Aligned_cols=198 Identities=12% Similarity=0.062 Sum_probs=130.9
Q ss_pred CccccceEEcCC---CCEEEEeCCCCeEEEcC-CC-eEEecCCCCCcccEEEccCCcEEEEeCCCccCCccccccccccc
Q 018705 93 SQSLLGLTTTKD---GGVILCDNEKGLLKVTE-EG-VEAIVPDASFTNDVIAASDGTLYFTVASTKYTPTDFYKDMAEGK 167 (351)
Q Consensus 93 ~~p~~gl~~d~~---G~L~v~d~~~gl~~~~~-~g-~~~l~~~~~~~n~l~~d~dG~ly~t~~~~~~~~~~~~~~~~~~~ 167 (351)
..|. ++++|++ |+||++|....++++++ ++ ++.+......|++|+++++|+||+++.... .
T Consensus 139 ~~P~-gvavd~~s~~g~Lyv~D~~~~I~~id~~~g~v~~~~~~~~~P~giavd~dG~lyVad~~~~-------------~ 204 (433)
T 4hw6_A 139 DNIW-RMMFDPNSNYDDLYWVGQRDAFRHVDFVNQYVDIKTTNIGQCADVNFTLNGDMVVVDDQSS-------------D 204 (433)
T ss_dssp SCCC-EEEECTTTTTCEEEEECBTSCEEEEETTTTEEEEECCCCSCEEEEEECTTCCEEEEECCSC-------------T
T ss_pred CCCc-eEEEccccCCCEEEEEeCCCCEEEEECCCCEEEEeecCCCCccEEEECCCCCEEEEcCCCC-------------c
Confidence 3689 9999974 89999998777889986 77 777766667899999999999999997421 0
Q ss_pred CCceEEEEeCCCCeE-EEeecCccccceEEEcC-CCCEEEEEecce-eEEeecCCCCce--eEEeccCCCCCCceEECCC
Q 018705 168 PYGQLRKYDPKLKET-TVLHEGFYFANGIALSK-NEDFVVVCESWK-RYWLKGDRAGIL--DAFIENLPGGPDNINLAPD 242 (351)
Q Consensus 168 ~~g~l~~~d~~~~~~-~~~~~~~~~~ngi~~~~-dg~~lyv~~~~~-~~~i~~~~~~~~--~~~~~~~~g~pd~i~~d~~ 242 (351)
....++.+++..+.. ......+..|+|+++++ +|. |||++..+ +++.-+...+.. .++.......+.++++|++
T Consensus 205 ~~~gv~~~~~~~~~~~~~~~~~~~~P~giavd~~~G~-lyv~d~~~~~V~~~d~~~g~~~~~~~~~~~~~~~~~ia~dpd 283 (433)
T 4hw6_A 205 TNTGIYLFTRASGFTERLSLCNARGAKTCAVHPQNGK-IYYTRYHHAMISSYDPATGTLTEEEVMMDTKGSNFHIVWHPT 283 (433)
T ss_dssp TSEEEEEECGGGTTCCEEEEEECSSBCCCEECTTTCC-EEECBTTCSEEEEECTTTCCEEEEEEECSCCSSCEEEEECTT
T ss_pred ccceEEEEECCCCeeccccccccCCCCEEEEeCCCCe-EEEEECCCCEEEEEECCCCeEEEEEeccCCCCCcccEEEeCC
Confidence 012466666543321 11223578899999999 665 99999876 555544433443 2232222234557999999
Q ss_pred CC-EEEEEecCCchhhhhhhcChhHHHHHHhccchhhcccCCCCCCceEEEEEECCC---CeE--EEEEECC---CC---
Q 018705 243 GS-FWIGLIKMNQTGVRAIQKCREKWELLDAYPGLISLLLPMGSDAGARVVKVDGND---GKI--IRDFNDP---DA--- 310 (351)
Q Consensus 243 G~-lwva~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~---g~~--~~~~~~~---~g--- 310 (351)
|+ ||++.... ..|.+++. + ++. ...+... .|
T Consensus 284 G~~LYvad~~~------------------------------------~~I~~~~~-d~~~~~~~~~~~~ag~~g~~g~~d 326 (433)
T 4hw6_A 284 GDWAYIIYNGK------------------------------------HCIYRVDY-NRETGKLAVPYIVCGQHSSPGWVD 326 (433)
T ss_dssp SSEEEEEETTT------------------------------------TEEEEEEB-CTTTCCBCCCEEEEECTTCCCCBC
T ss_pred CCEEEEEeCCC------------------------------------CEEEEEeC-CCCCcccCcEEEEEecCCCCccCC
Confidence 98 99997531 25777665 3 221 1122211 11
Q ss_pred -----CcccceeEEEE----------ECCEEEEEecCCCeEEEEeCC
Q 018705 311 -----TYISFVTSAAE----------FDGNLYLASLQSNFIGILPLD 342 (351)
Q Consensus 311 -----~~~~~~~~~~~----------~~g~L~ig~~~~~~i~~~~~~ 342 (351)
..+..+..++. .+|.||++...+.+|.+++..
T Consensus 327 g~~~~a~~~~P~giav~~n~~y~~dd~~g~lyvaD~~n~~I~~~~~~ 373 (433)
T 4hw6_A 327 GMGTGARLWGPNQGIFVKNEAYAGEEDEYDFYFCDRDSHTVRVLTPE 373 (433)
T ss_dssp EEGGGSBCSSEEEEEEEECGGGTTSSCCEEEEEEETTTTEEEEECTT
T ss_pred CcccceEEcCCccEEEEccccccccCCCCcEEEEECCCCEEEEECCC
Confidence 11334566665 458999999999999999854
No 74
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=99.42 E-value=4.1e-11 Score=115.23 Aligned_cols=180 Identities=14% Similarity=0.113 Sum_probs=121.7
Q ss_pred cCCCceEEE-------eeCCCeEEEEEcCC-------EEEEEEcCC-CeEE------EEeecCCccccceEEcC-CCCEE
Q 018705 51 VNHPEDVSV-------VVSKGALYTATRDG-------WVKYFILHN-ETLV------NWKHIDSQSLLGLTTTK-DGGVI 108 (351)
Q Consensus 51 ~~~pe~i~~-------d~~~g~lyv~~~~g-------~I~~~d~~~-g~~~------~~~~~~~~p~~gl~~d~-~G~L~ 108 (351)
+..|.+|++ +++++.+|++...+ .|+.++... |++. .+. ....|+ ++++++ +|.||
T Consensus 185 ~~~p~~ia~~~~~~~~d~~G~~lyvad~~~~~~~~~~~V~~i~r~~~G~~~~~~~~~~v~-~~~~p~-giavdp~~g~LY 262 (496)
T 3kya_A 185 TNRIRSIAFNKKIEGYADEAEYMIVAIDYDGKGDESPSVYIIKRNADGTFDDRSDIQLIA-AYKQCN-GATIHPINGELY 262 (496)
T ss_dssp CSBEEEEEECCCBTTTBCTTCEEEEEECCCTTGGGEEEEEEEECCTTSCCSTTSCEEEEE-EESCCC-CEEECTTTCCEE
T ss_pred cCCCcEEEEeecccccCCCCCEEEEEeCCCCCcccCceEEEEecCCCCceeecccceeec-cCCCce-EEEEcCCCCeEE
Confidence 557999999 96666799987654 388887543 3442 222 345789 999998 67999
Q ss_pred EEeCCCC-eEEEcCC--------C-e-------------EEecCC-CCCcccEEEccCCc-EEEEeCCCccCCccccccc
Q 018705 109 LCDNEKG-LLKVTEE--------G-V-------------EAIVPD-ASFTNDVIAASDGT-LYFTVASTKYTPTDFYKDM 163 (351)
Q Consensus 109 v~d~~~g-l~~~~~~--------g-~-------------~~l~~~-~~~~n~l~~d~dG~-ly~t~~~~~~~~~~~~~~~ 163 (351)
+++...+ +++++.+ + . +.+... ...|.+|+++++|+ +||+|+.
T Consensus 263 vtd~~~g~V~r~d~~~~~~~~~tg~~~tp~~~~~~g~~~~l~~~~~~~~p~~ia~~p~G~~lYvaD~~------------ 330 (496)
T 3kya_A 263 FNSYEKGQVFRLDLVDYFKTIKNGGSWDPIVKNNPNTFKQLFTIADPSWEFQIFIHPTGKYAYFGVIN------------ 330 (496)
T ss_dssp EEETTTTEEEEECHHHHHHHHHTTCCCCCBGGGCTTTEEEEEECSSSSCCEEEEECTTSSEEEEEETT------------
T ss_pred EEECCCCEEEEEecccccccccCceeecccccccccccceeEecCCCCCceEEEEcCCCCEEEEEeCC------------
Confidence 9998876 8888843 4 4 222222 25689999999997 8999976
Q ss_pred ccccCCceEEEEe--CCCCeE---EEeec---------------Cccccc-eEEEc-------CCCCEEEEEecce-eEE
Q 018705 164 AEGKPYGQLRKYD--PKLKET---TVLHE---------------GFYFAN-GIALS-------KNEDFVVVCESWK-RYW 214 (351)
Q Consensus 164 ~~~~~~g~l~~~d--~~~~~~---~~~~~---------------~~~~~n-gi~~~-------~dg~~lyv~~~~~-~~~ 214 (351)
..+|++++ ..++.+ +.++. .+..|. |++++ ++|+ |||+++.+ |++
T Consensus 331 -----~h~I~kid~dg~~~~~~~~~~~aG~~g~~G~~DG~~~~a~f~~P~~gv~vd~~~~~~~~~g~-lyVaD~~N~rIr 404 (496)
T 3kya_A 331 -----NHYFMRSDYDEIKKEFITPYNFVGGYKQSGYRDDVGTEARMNNPCQGVFVKNPDYTGEEEYD-FYFVDRLNFCVR 404 (496)
T ss_dssp -----TTEEEEEEEETTTTEECCCEEEEEBTTBCCCBCCBGGGCBCSSEEEEEEEECTTCCSSCCEE-EEEEEGGGTEEE
T ss_pred -----CCEEEEEecCCCcceecccEEecCCCCCCcccCCcccccccCCCeEEEEEccccccccCCCe-EEEEECCCCEEE
Confidence 35788854 444433 22221 245788 78887 5565 99999988 766
Q ss_pred eecCCCCceeEEecc-C----------------------CCCCCceEECCC-CCEEEEEec
Q 018705 215 LKGDRAGILDAFIEN-L----------------------PGGPDNINLAPD-GSFWIGLIK 251 (351)
Q Consensus 215 i~~~~~~~~~~~~~~-~----------------------~g~pd~i~~d~~-G~lwva~~~ 251 (351)
.-++ .|....++.. . -..|.++++|++ |+|||+...
T Consensus 405 ~i~~-~G~v~TiaG~g~~~~~~~~~~~G~~dG~~~~~a~f~~P~gIavd~~~g~lyVaD~~ 464 (496)
T 3kya_A 405 KVTP-EGIVSTYAGRGASTSLADGNQWGTDDGDLREVARFRDVSGLVYDDVKEMFYVHDQV 464 (496)
T ss_dssp EECT-TCBEEEEEESCTTHHHHHSCSCCCCCEETTTTCCCSSEEEEEEETTTTEEEEEETT
T ss_pred EEeC-CCCEEEEecccccccccCccccccCCCCchhhhhcCCCcEEEEECCCCEEEEEeCC
Confidence 5542 3454444321 0 013677899996 999999754
No 75
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=99.41 E-value=1.8e-11 Score=113.12 Aligned_cols=182 Identities=12% Similarity=0.106 Sum_probs=122.0
Q ss_pred CCcCCCceEEEeeCCCeEEEEEc------CCEEEEEEcCCCeE-EEEeec------CCccccceEEcC-CCCEEEEeC--
Q 018705 49 GCVNHPEDVSVVVSKGALYTATR------DGWVKYFILHNETL-VNWKHI------DSQSLLGLTTTK-DGGVILCDN-- 112 (351)
Q Consensus 49 ~~~~~pe~i~~d~~~g~lyv~~~------~g~I~~~d~~~g~~-~~~~~~------~~~p~~gl~~d~-~G~L~v~d~-- 112 (351)
+.+..|.++++| .+++||+... .++|+++|++++++ +.+... ...++ ++++|+ +|.+|+++.
T Consensus 64 ~~~~~p~gv~~d-~~g~L~v~D~g~~~~~~~~i~~~d~~tg~~~~~~~~~~~~~~~~~~~~-~v~vd~~~g~~yvtd~~~ 141 (343)
T 2qe8_A 64 ITFDTVLGIKSD-GNGIVWMLDNGNQSKSVPKLVAWDTLNNQLSRVIYLPPPITLSNSFVN-DLAVDLIHNFVYISDPAP 141 (343)
T ss_dssp CCCSCEEEEEEC-SSSEEEEEECHHHHTSCCEEEEEETTTTEEEEEEECCTTTSCTTCCCC-EEEEETTTTEEEEEECCS
T ss_pred cceeEeeEEEEc-CCCcEEEEcCCCCcCCCCeEEEEECCCCeEEEEEECChhhcccccccc-eEEEecCCCEEEEEcCcc
Confidence 346789999999 4678887653 47899999988884 444321 13568 999996 578999986
Q ss_pred -C-CCeEEEcC-CC-e-EEecC--C---------------------------CCCcccEEEccCC-cEEEEeCCCccCCc
Q 018705 113 -E-KGLLKVTE-EG-V-EAIVP--D---------------------------ASFTNDVIAASDG-TLYFTVASTKYTPT 157 (351)
Q Consensus 113 -~-~gl~~~~~-~g-~-~~l~~--~---------------------------~~~~n~l~~d~dG-~ly~t~~~~~~~~~ 157 (351)
. .+++.++. +| . +.+.. . ...+|+|++++|| .+|+++..
T Consensus 142 ~~~~~i~v~d~~~g~~~r~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~~~gia~s~dg~~ly~~~~~------ 215 (343)
T 2qe8_A 142 DDKAALIRVDLQTGLAARVLQGYPGIAPEDIDLVIDGVPVQIGQPDGTVIRPHLGVNGIVLDAENEWLYLSPMH------ 215 (343)
T ss_dssp GGGCEEEEEETTTCCEEEECTTCTTTSCCSCCCEETTEECBEECTTSCEECCCCCEEEEEECTTSCEEEEEESS------
T ss_pred CCCCeEEEEECCCCCEEEEecCCCcccccccceeECCEEEEeccCCCceeceecccceeEeccCCCEEEEEeCC------
Confidence 3 46777774 45 3 33311 0 0247999999999 59998865
Q ss_pred ccccccccccCCceEEEEeCC---CCe---------EEEeecCccccceEEEcCCCCEEEEEecce-eEEeecCCCCcee
Q 018705 158 DFYKDMAEGKPYGQLRKYDPK---LKE---------TTVLHEGFYFANGIALSKNEDFVVVCESWK-RYWLKGDRAGILD 224 (351)
Q Consensus 158 ~~~~~~~~~~~~g~l~~~d~~---~~~---------~~~~~~~~~~~ngi~~~~dg~~lyv~~~~~-~~~i~~~~~~~~~ 224 (351)
..+|++++.+ .+. +... .....|+||+++++|+ +|+++..+ ++..-+...++..
T Consensus 216 -----------~~~l~~~~~~~~~~~~~~~~~~~~~~~~~-g~~g~pdgia~d~~G~-l~va~~~~~~V~~~d~~~G~~~ 282 (343)
T 2qe8_A 216 -----------STSMYRIKSADLSNLQLTDAELGSKIERY-SEKPICDGISIDKDHN-IYVGDLAHSAIGVITSADRAYK 282 (343)
T ss_dssp -----------CSEEEEEEHHHHTCTTCCHHHHHTTCEEE-EECCSCSCEEECTTCC-EEEEEGGGTEEEEEETTTTEEE
T ss_pred -----------CCeEEEEEHHHhcCCCCChhhhhcceEec-ccCCCCceEEECCCCC-EEEEccCCCeEEEEECCCCCEE
Confidence 2378888632 110 1111 1234799999999997 99999876 4443333234544
Q ss_pred EEecc-CCCCCCceEECCCCCEEEEEec
Q 018705 225 AFIEN-LPGGPDNINLAPDGSFWIGLIK 251 (351)
Q Consensus 225 ~~~~~-~~g~pd~i~~d~~G~lwva~~~ 251 (351)
.+... .-..|++++++++|+||++...
T Consensus 283 ~~~~~~~~~~p~~va~~~~g~l~v~~~~ 310 (343)
T 2qe8_A 283 LLVTDEKLSWTDSFNFGSDGYLYFDCNQ 310 (343)
T ss_dssp EEEECGGGSCEEEEEECTTSCEEEEECC
T ss_pred EEEECCceecCCeeEECCCCcEEEEeCc
Confidence 44322 1246899999999999999864
No 76
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.39 E-value=2e-10 Score=104.40 Aligned_cols=230 Identities=13% Similarity=0.126 Sum_probs=146.0
Q ss_pred EEeeCCCeEEEEE-cCCEEEEEEcCCCeEEEEeecCCccccceEEcCCCC-EEEEeCC-CCeEEEcC-CC-e-EEecCCC
Q 018705 58 SVVVSKGALYTAT-RDGWVKYFILHNETLVNWKHIDSQSLLGLTTTKDGG-VILCDNE-KGLLKVTE-EG-V-EAIVPDA 131 (351)
Q Consensus 58 ~~d~~~g~lyv~~-~~g~I~~~d~~~g~~~~~~~~~~~p~~gl~~d~~G~-L~v~d~~-~gl~~~~~-~g-~-~~l~~~~ 131 (351)
.++..++.+|+.. .++.|..+|..+++..........+. +++++++|+ ||++... ..++.++. ++ . .......
T Consensus 4 ~~~~~~~~~~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~-~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~ 82 (331)
T 3u4y_A 4 MFQTTSNFGIVVEQHLRRISFFSTDTLEILNQITLGYDFV-DTAITSDCSNVVVTSDFCQTLVQIETQLEPPKVVAIQEG 82 (331)
T ss_dssp ---CCCCEEEEEEGGGTEEEEEETTTCCEEEEEECCCCEE-EEEECSSSCEEEEEESTTCEEEEEECSSSSCEEEEEEEC
T ss_pred eEcCCCCEEEEEecCCCeEEEEeCcccceeeeEEccCCcc-eEEEcCCCCEEEEEeCCCCeEEEEECCCCceeEEecccC
Confidence 3444567777755 57899999998888755444445556 899999997 8888874 45666664 55 4 3322222
Q ss_pred CCccc-EEEccCCcEEEEeCCCccCCcccccccccccCCceEEEEeCCCCeEEEeecCccccceEEEcCCCCEEEEEecc
Q 018705 132 SFTND-VIAASDGTLYFTVASTKYTPTDFYKDMAEGKPYGQLRKYDPKLKETTVLHEGFYFANGIALSKNEDFVVVCESW 210 (351)
Q Consensus 132 ~~~n~-l~~d~dG~ly~t~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~~~~~~~~~~~~~~ngi~~~~dg~~lyv~~~~ 210 (351)
..|.. +++++||+..++.... ...+.|..||.++++..........|++++++|||+.+|+++..
T Consensus 83 ~~~~~~~~~s~dg~~l~~~~~~--------------~~~~~i~v~d~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~ 148 (331)
T 3u4y_A 83 QSSMADVDITPDDQFAVTVTGL--------------NHPFNMQSYSFLKNKFISTIPIPYDAVGIAISPNGNGLILIDRS 148 (331)
T ss_dssp SSCCCCEEECTTSSEEEECCCS--------------SSSCEEEEEETTTTEEEEEEECCTTEEEEEECTTSSCEEEEEET
T ss_pred CCCccceEECCCCCEEEEecCC--------------CCcccEEEEECCCCCeEEEEECCCCccceEECCCCCEEEEEecC
Confidence 56777 9999999744443220 01127999999888776555555678999999999989998765
Q ss_pred e-e-EEeec-CCCCce----eEEeccCCCCCCceEECCCCC-EEEEEecCCchhhhhhhcChhHHHHHHhccchhhcccC
Q 018705 211 K-R-YWLKG-DRAGIL----DAFIENLPGGPDNINLAPDGS-FWIGLIKMNQTGVRAIQKCREKWELLDAYPGLISLLLP 282 (351)
Q Consensus 211 ~-~-~~i~~-~~~~~~----~~~~~~~~g~pd~i~~d~~G~-lwva~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 282 (351)
. . +++-+ ...+.. .... .....|.+++++++|+ +|++...
T Consensus 149 ~~~~i~~~~~~~~g~~~~~~~~~~-~~~~~~~~~~~spdg~~l~v~~~~------------------------------- 196 (331)
T 3u4y_A 149 SANTVRRFKIDADGVLFDTGQEFI-SGGTRPFNITFTPDGNFAFVANLI------------------------------- 196 (331)
T ss_dssp TTTEEEEEEECTTCCEEEEEEEEE-CSSSSEEEEEECTTSSEEEEEETT-------------------------------
T ss_pred CCceEEEEEECCCCcEeecCCccc-cCCCCccceEECCCCCEEEEEeCC-------------------------------
Confidence 3 3 33211 011111 1111 1223478899999997 8887643
Q ss_pred CCCCCceEEEEEECCCCeE---EEEEECCCCCcccceeEEEEE--CCEEEEEecCCCeEEEEeCCCC
Q 018705 283 MGSDAGARVVKVDGNDGKI---IRDFNDPDATYISFVTSAAEF--DGNLYLASLQSNFIGILPLDGP 344 (351)
Q Consensus 283 ~~~~~~~~v~~~~~~~g~~---~~~~~~~~g~~~~~~~~~~~~--~g~L~ig~~~~~~i~~~~~~~~ 344 (351)
.+.|..+|.++++. +..+.... .+..+... +..||+++...+.|.++++.+-
T Consensus 197 -----~~~v~v~d~~~~~~~~~~~~~~~~~-----~~~~~~~spdg~~l~v~~~~~~~i~~~d~~~~ 253 (331)
T 3u4y_A 197 -----GNSIGILETQNPENITLLNAVGTNN-----LPGTIVVSRDGSTVYVLTESTVDVFNFNQLSG 253 (331)
T ss_dssp -----TTEEEEEECSSTTSCEEEEEEECSS-----CCCCEEECTTSSEEEEECSSEEEEEEEETTTT
T ss_pred -----CCeEEEEECCCCcccceeeeccCCC-----CCceEEECCCCCEEEEEEcCCCEEEEEECCCC
Confidence 13577788756666 66665321 23344443 4458888877778888887653
No 77
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=99.39 E-value=2.7e-11 Score=111.16 Aligned_cols=175 Identities=15% Similarity=0.121 Sum_probs=120.1
Q ss_pred CCceEEEeeCCCeEEEEEcCCEEEEEEcCCCeEEEEeec-----CCccccceEEcCCCCEEEEeCC-------CCeEEEc
Q 018705 53 HPEDVSVVVSKGALYTATRDGWVKYFILHNETLVNWKHI-----DSQSLLGLTTTKDGGVILCDNE-------KGLLKVT 120 (351)
Q Consensus 53 ~pe~i~~d~~~g~lyv~~~~g~I~~~d~~~g~~~~~~~~-----~~~p~~gl~~d~~G~L~v~d~~-------~gl~~~~ 120 (351)
.+.+++++ .+|.+|+++.+ +|+++|.++++++.+... ...++ .+++|++|++|+++.. .++++++
T Consensus 91 ~v~~i~~~-~dg~l~v~~~~-gl~~~d~~~g~~~~~~~~~~~~~~~~~~-~i~~d~~G~l~v~~~~~~~~~~~~~l~~~~ 167 (326)
T 2ghs_A 91 MGSALAKI-SDSKQLIASDD-GLFLRDTATGVLTLHAELESDLPGNRSN-DGRMHPSGALWIGTMGRKAETGAGSIYHVA 167 (326)
T ss_dssp CEEEEEEE-ETTEEEEEETT-EEEEEETTTCCEEEEECSSTTCTTEEEE-EEEECTTSCEEEEEEETTCCTTCEEEEEEE
T ss_pred cceEEEEe-CCCeEEEEECC-CEEEEECCCCcEEEEeeCCCCCCCCCCC-CEEECCCCCEEEEeCCCcCCCCceEEEEEe
Confidence 57789999 46889988754 599999988887765432 13577 8999999999998752 4788888
Q ss_pred CCC-eEEecCCCCCcccEEEccCC-cEEEEeCCCccCCcccccccccccCCceEEEEeCC--CC-eE---EEee---cCc
Q 018705 121 EEG-VEAIVPDASFTNDVIAASDG-TLYFTVASTKYTPTDFYKDMAEGKPYGQLRKYDPK--LK-ET---TVLH---EGF 189 (351)
Q Consensus 121 ~~g-~~~l~~~~~~~n~l~~d~dG-~ly~t~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~--~~-~~---~~~~---~~~ 189 (351)
+| .+.+......++++++++|| .+|+++.. .++|++|+.+ +| ++ +.+. ...
T Consensus 168 -~g~~~~~~~~~~~~~~i~~s~dg~~lyv~~~~-----------------~~~I~~~d~~~~~Gl~~~~~~~~~~~~~~~ 229 (326)
T 2ghs_A 168 -KGKVTKLFADISIPNSICFSPDGTTGYFVDTK-----------------VNRLMRVPLDARTGLPTGKAEVFIDSTGIK 229 (326)
T ss_dssp -TTEEEEEEEEESSEEEEEECTTSCEEEEEETT-----------------TCEEEEEEBCTTTCCBSSCCEEEEECTTSS
T ss_pred -CCcEEEeeCCCcccCCeEEcCCCCEEEEEECC-----------------CCEEEEEEcccccCCcccCceEEEECCCCC
Confidence 77 55554433678999999999 58998864 3579999864 55 31 2221 123
Q ss_pred cccceEEEcCCCCEEEEEecce-eEEeecCCCCc-eeEEeccCCC-CCCceEEC-CCC-CEEEEEecC
Q 018705 190 YFANGIALSKNEDFVVVCESWK-RYWLKGDRAGI-LDAFIENLPG-GPDNINLA-PDG-SFWIGLIKM 252 (351)
Q Consensus 190 ~~~ngi~~~~dg~~lyv~~~~~-~~~i~~~~~~~-~~~~~~~~~g-~pd~i~~d-~~G-~lwva~~~~ 252 (351)
..|+|++++++|+ +|++.... ++..-+.. ++ ...+. .+. .+.+++++ +++ .||+++...
T Consensus 230 ~~p~gi~~d~~G~-lwva~~~~~~v~~~d~~-g~~~~~i~--~~~~~~~~~af~g~d~~~L~vt~~~~ 293 (326)
T 2ghs_A 230 GGMDGSVCDAEGH-IWNARWGEGAVDRYDTD-GNHIARYE--VPGKQTTCPAFIGPDASRLLVTSARE 293 (326)
T ss_dssp SEEEEEEECTTSC-EEEEEETTTEEEEECTT-CCEEEEEE--CSCSBEEEEEEESTTSCEEEEEEBCT
T ss_pred CCCCeeEECCCCC-EEEEEeCCCEEEEECCC-CCEEEEEE--CCCCCcEEEEEecCCCCEEEEEecCC
Confidence 5689999999997 99987543 33332332 33 22222 222 35678887 665 599997653
No 78
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.39 E-value=1.6e-10 Score=106.09 Aligned_cols=180 Identities=18% Similarity=0.171 Sum_probs=114.8
Q ss_pred cCCCceEEEeeCCCeEEEEE-cCCEEEEEEcC-CCeEEEEe---ecC---------CccccceEEcCCCCEEEEeCCCC-
Q 018705 51 VNHPEDVSVVVSKGALYTAT-RDGWVKYFILH-NETLVNWK---HID---------SQSLLGLTTTKDGGVILCDNEKG- 115 (351)
Q Consensus 51 ~~~pe~i~~d~~~g~lyv~~-~~g~I~~~d~~-~g~~~~~~---~~~---------~~p~~gl~~d~~G~L~v~d~~~g- 115 (351)
...|.+++++|++..+|++. .++.|..|+.. +|+.+... ... ..+. +++++++|++|+++...+
T Consensus 85 ~~~p~~~a~spdg~~l~~~~~~~~~v~v~~~~~~g~~~~~~~~~~~~~~p~~~~~~~~~~-~~~~spdg~l~v~~~~~~~ 163 (347)
T 3hfq_A 85 GTPPAYVAVDEARQLVYSANYHKGTAEVMKIAADGALTLTDTVQHSGHGPRPEQDGSHIH-YTDLTPDNRLAVIDLGSDK 163 (347)
T ss_dssp SCCCSEEEEETTTTEEEEEETTTTEEEEEEECTTSCEEEEEEEECCCCCSSTTCSSCCEE-EEEECTTSCEEEEETTTTE
T ss_pred CCCCEEEEECCCCCEEEEEeCCCCEEEEEEeCCCCCeeecceeecCCCCCCccccCCCce-EEEECCCCcEEEEeCCCCE
Confidence 45799999998777899887 57888888873 45443322 111 2366 799999999999987665
Q ss_pred eEEEc--CCC-eEEec---CC-CCCcccEEEccCCc-EEEEeCCCccCCcccccccccccCCce--EEEEeCCCCeEEEe
Q 018705 116 LLKVT--EEG-VEAIV---PD-ASFTNDVIAASDGT-LYFTVASTKYTPTDFYKDMAEGKPYGQ--LRKYDPKLKETTVL 185 (351)
Q Consensus 116 l~~~~--~~g-~~~l~---~~-~~~~n~l~~d~dG~-ly~t~~~~~~~~~~~~~~~~~~~~~g~--l~~~d~~~~~~~~~ 185 (351)
+..++ .+| ..... .. ...|++++++|||+ +|+++.. .+. ++.++..+++.+.+
T Consensus 164 v~~~~~~~~g~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~-----------------~~~v~v~~~~~~~g~~~~~ 226 (347)
T 3hfq_A 164 VYVYNVSDAGQLSEQSVLTMEAGFGPRHLVFSPDGQYAFLAGEL-----------------SSQIASLKYDTQTGAFTQL 226 (347)
T ss_dssp EEEEEECTTSCEEEEEEEECCTTCCEEEEEECTTSSEEEEEETT-----------------TTEEEEEEEETTTTEEEEE
T ss_pred EEEEEECCCCcEEEeeeEEcCCCCCCceEEECCCCCEEEEEeCC-----------------CCEEEEEEecCCCCceEEe
Confidence 43444 256 44321 11 15788999999997 8887754 234 44555545665433
Q ss_pred ec--C-------ccccceEEEcCCCCEEEEEecce---e-EEeecCCCCceeEEec--cCCCCCCceEECCCCC-EEEEE
Q 018705 186 HE--G-------FYFANGIALSKNEDFVVVCESWK---R-YWLKGDRAGILDAFIE--NLPGGPDNINLAPDGS-FWIGL 249 (351)
Q Consensus 186 ~~--~-------~~~~ngi~~~~dg~~lyv~~~~~---~-~~i~~~~~~~~~~~~~--~~~g~pd~i~~d~~G~-lwva~ 249 (351)
.. . ...+.+++++|||++||++.... . +.+.. .+..+.... .....|.+++++++|+ ||++.
T Consensus 227 ~~~~~~~~~~~~~~~~~~i~~spdG~~l~v~~~~~~~v~v~~~~~--~g~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~ 304 (347)
T 3hfq_A 227 GIVKTIPADYTAHNGAAAIRLSHDGHFLYVSNRGYNTLAVFAVTA--DGHLTLIQQISTEGDFPRDFDLDPTEAFVVVVN 304 (347)
T ss_dssp EEEESSCTTCCSCCEEEEEEECTTSCEEEEEEETTTEEEEEEECG--GGCEEEEEEEECSSSCCCEEEECTTSSEEEEEE
T ss_pred eeeeecCCCCCCCCcceeEEECCCCCEEEEEeCCCCEEEEEEECC--CCcEEEeEEEecCCCCcCeEEECCCCCEEEEEE
Confidence 21 1 13477899999999999987643 2 33331 122222211 1123588999999997 77765
Q ss_pred e
Q 018705 250 I 250 (351)
Q Consensus 250 ~ 250 (351)
.
T Consensus 305 ~ 305 (347)
T 3hfq_A 305 Q 305 (347)
T ss_dssp T
T ss_pred c
Confidence 4
No 79
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=99.38 E-value=5.7e-10 Score=99.96 Aligned_cols=212 Identities=15% Similarity=0.140 Sum_probs=142.3
Q ss_pred CCeEEEEEcCCEEEEEEcCCCeEEEEeecC--CccccceEEcCCCCEEEEeCCCCeEEEcCCC--eEEecCCC-CCcccE
Q 018705 63 KGALYTATRDGWVKYFILHNETLVNWKHID--SQSLLGLTTTKDGGVILCDNEKGLLKVTEEG--VEAIVPDA-SFTNDV 137 (351)
Q Consensus 63 ~g~lyv~~~~g~I~~~d~~~g~~~~~~~~~--~~p~~gl~~d~~G~L~v~d~~~gl~~~~~~g--~~~l~~~~-~~~n~l 137 (351)
++.++++..+++|+.+|.++|+...-.... ..++ .++++++|+++++ ..++++.++++| +-.+.... ..++++
T Consensus 5 ~~~lv~~~~~~~v~~~d~~tG~~~w~~~~~~~~~~~-~~~~~pdG~ilvs-~~~~V~~~d~~G~~~W~~~~~~~~~~~~~ 82 (276)
T 3no2_A 5 QHLLVGGSGWNKIAIINKDTKEIVWEYPLEKGWECN-SVAATKAGEILFS-YSKGAKMITRDGRELWNIAAPAGCEMQTA 82 (276)
T ss_dssp CEEEEECTTCSEEEEEETTTTEEEEEEECCTTCCCC-EEEECTTSCEEEE-CBSEEEEECTTSCEEEEEECCTTCEEEEE
T ss_pred CcEEEeeCCCCEEEEEECCCCeEEEEeCCCccCCCc-CeEECCCCCEEEe-CCCCEEEECCCCCEEEEEcCCCCcccccc
Confidence 556777788999999999889874222222 3577 8999999999995 466799999877 44444321 356678
Q ss_pred EEccCCcEEEEeCCCccCCcccccccccccCCceEEEEeCCCCeEEEee--c----CccccceEEEcCCCCEEEEEecce
Q 018705 138 IAASDGTLYFTVASTKYTPTDFYKDMAEGKPYGQLRKYDPKLKETTVLH--E----GFYFANGIALSKNEDFVVVCESWK 211 (351)
Q Consensus 138 ~~d~dG~ly~t~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~~~~~~~~--~----~~~~~ngi~~~~dg~~lyv~~~~~ 211 (351)
.+.+||++++++... .++++.+|++++.+..+. . ....+.+++.+++|+ ++++....
T Consensus 83 ~~~~dG~~lv~~~~~----------------~~~v~~vd~~Gk~l~~~~~~~~~~~~~~~~~~v~~~~~G~-~lv~~~~~ 145 (276)
T 3no2_A 83 RILPDGNALVAWCGH----------------PSTILEVNMKGEVLSKTEFETGIERPHAQFRQINKNKKGN-YLVPLFAT 145 (276)
T ss_dssp EECTTSCEEEEEEST----------------TEEEEEECTTSCEEEEEEECCSCSSGGGSCSCCEECTTSC-EEEEETTT
T ss_pred EECCCCCEEEEecCC----------------CCEEEEEeCCCCEEEEEeccCCCCcccccccCceECCCCC-EEEEecCC
Confidence 889999999987531 357888888644333332 1 123567889999999 55666544
Q ss_pred -eEEeecCCCCceeEEeccCCCCCCceEECCCCCEEEEEecCCchhhhhhhcChhHHHHHHhccchhhcccCCCCCCceE
Q 018705 212 -RYWLKGDRAGILDAFIENLPGGPDNINLAPDGSFWIGLIKMNQTGVRAIQKCREKWELLDAYPGLISLLLPMGSDAGAR 290 (351)
Q Consensus 212 -~~~i~~~~~~~~~~~~~~~~g~pd~i~~d~~G~lwva~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 290 (351)
++..-+.. |+..--. ..++.|.+..+.++|+++++... .+.
T Consensus 146 ~~v~~~d~~-G~~~w~~-~~~~~~~~~~~~~~g~~~v~~~~------------------------------------~~~ 187 (276)
T 3no2_A 146 SEVREIAPN-GQLLNSV-KLSGTPFSSAFLDNGDCLVACGD------------------------------------AHC 187 (276)
T ss_dssp TEEEEECTT-SCEEEEE-ECSSCCCEEEECTTSCEEEECBT------------------------------------TSE
T ss_pred CEEEEECCC-CCEEEEE-ECCCCccceeEcCCCCEEEEeCC------------------------------------CCe
Confidence 44443343 4432211 23346788889999999998643 136
Q ss_pred EEEEECCCCeEEEEEECC--CCCcccceeEEEE-ECCEEEEEec
Q 018705 291 VVKVDGNDGKIIRDFNDP--DATYISFVTSAAE-FDGNLYLASL 331 (351)
Q Consensus 291 v~~~~~~~g~~~~~~~~~--~g~~~~~~~~~~~-~~g~L~ig~~ 331 (351)
|+.+|+++|+++-.+... .+.....++++.. .+|.+|++++
T Consensus 188 v~~~d~~tG~~~w~~~~~~~~~~~l~~~~~~~~~~~G~i~v~~~ 231 (276)
T 3no2_A 188 FVQLNLESNRIVRRVNANDIEGVQLFFVAQLFPLQNGGLYICNW 231 (276)
T ss_dssp EEEECTTTCCEEEEEEGGGSBSCCCSEEEEEEECTTSCEEEEEE
T ss_pred EEEEeCcCCcEEEEecCCCCCCccccccccceEcCCCCEEEEec
Confidence 999999449999888743 2222444666654 4789999996
No 80
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=99.38 E-value=4.1e-10 Score=104.56 Aligned_cols=242 Identities=11% Similarity=0.090 Sum_probs=141.2
Q ss_pred cCCCceEEEeeCCCeEEEEEcCCEEEEEEcC-CCeEEEEee--cCCccccceEEcCCCC-EEE--Ee-------C-----
Q 018705 51 VNHPEDVSVVVSKGALYTATRDGWVKYFILH-NETLVNWKH--IDSQSLLGLTTTKDGG-VIL--CD-------N----- 112 (351)
Q Consensus 51 ~~~pe~i~~d~~~g~lyv~~~~g~I~~~d~~-~g~~~~~~~--~~~~p~~gl~~d~~G~-L~v--~d-------~----- 112 (351)
...|..++++|++..+|++..+ .|..|+.. +|+...... ..+.|. .++++++|+ ||+ ++ .
T Consensus 39 ~~~~~~~a~spdg~~l~~~~~~-~v~~~~~~~~g~~~~~~~~~~~g~~~-~~~~spdg~~l~~~~~~~~~~~~~~~~~~~ 116 (365)
T 1jof_A 39 DEPISWMTFDHERKNIYGAAMK-KWSSFAVKSPTEIVHEASHPIGGHPR-ANDADTNTRAIFLLAAKQPPYAVYANPFYK 116 (365)
T ss_dssp TCCCSEEEECTTSSEEEEEEBT-EEEEEEEEETTEEEEEEEEECCSSGG-GGCTTSCCEEEEEEECSSTTCCEEEEEESS
T ss_pred CCCCcEEEECCCCCEEEEEccc-eEEEEEECCCCCEEEeeEeecCCCCc-cEEECCCCCEEEEEEecCCcceeccceeec
Confidence 4579999999877789998877 78888875 676643322 224588 899999997 343 32 0
Q ss_pred CCC---eEEEcCCC-e-EEec----CCCCCcccEEEccCCc-EEEEeCCCccCCcccccccccccCCceEEEEeCC-CCe
Q 018705 113 EKG---LLKVTEEG-V-EAIV----PDASFTNDVIAASDGT-LYFTVASTKYTPTDFYKDMAEGKPYGQLRKYDPK-LKE 181 (351)
Q Consensus 113 ~~g---l~~~~~~g-~-~~l~----~~~~~~n~l~~d~dG~-ly~t~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~-~~~ 181 (351)
..+ ++.++.+| . ..+. .....+.+++++|||+ +|+++.. .+.|+.|+.+ +++
T Consensus 117 ~~g~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~~~spdG~~l~~~~~~-----------------~~~v~~~~~~~~g~ 179 (365)
T 1jof_A 117 FAGYGNVFSVSETGKLEKNVQNYEYQENTGIHGMVFDPTETYLYSADLT-----------------ANKLWTHRKLASGE 179 (365)
T ss_dssp SCCEEEEEEECTTCCEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETT-----------------TTEEEEEEECTTSC
T ss_pred CCceEEEEccCCCCcCcceEeeEEeCCCCcceEEEECCCCCEEEEEcCC-----------------CCEEEEEEECCCCC
Confidence 233 33333355 3 2222 1225789999999995 7777753 3578888776 676
Q ss_pred EEEee--c---CccccceEEEcCCCCEEEEEecc-e--eEEeecCCCCceeE---EeccCC----C---------CCCce
Q 018705 182 TTVLH--E---GFYFANGIALSKNEDFVVVCESW-K--RYWLKGDRAGILDA---FIENLP----G---------GPDNI 237 (351)
Q Consensus 182 ~~~~~--~---~~~~~ngi~~~~dg~~lyv~~~~-~--~~~i~~~~~~~~~~---~~~~~~----g---------~pd~i 237 (351)
.+.+. . ....|.+++++|||+++|++... + .++.-+...++... ....++ + .+.++
T Consensus 180 ~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i 259 (365)
T 1jof_A 180 VELVGSVDAPDPGDHPRWVAMHPTGNYLYALMEAGNRICEYVIDPATHMPVYTHHSFPLIPPGIPDRDPETGKGLYRADV 259 (365)
T ss_dssp EEEEEEEECSSTTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEEESSCTTCCCBCTTTSSBSEEEEE
T ss_pred EEEeeeEecCCCCCCCCEeEECCCCCEEEEEECCCCeEEEEEEeCCCCcEEEccceEEcCCCCcCCcccccccccccccE
Confidence 54321 1 14568999999999999997753 3 33322222233211 011121 1 25678
Q ss_pred E-ECCCCC-EEEEEecCCchhhhhhhcChhHHHHHHhccchhhcccCCCCCCceEEEEEECCCCeEEEE---EECCCCCc
Q 018705 238 N-LAPDGS-FWIGLIKMNQTGVRAIQKCREKWELLDAYPGLISLLLPMGSDAGARVVKVDGNDGKIIRD---FNDPDATY 312 (351)
Q Consensus 238 ~-~d~~G~-lwva~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~g~~~~~---~~~~~g~~ 312 (351)
+ ++++|+ ||++....... . ...-.++.+++ +|+.... ...+...
T Consensus 260 ~~~spdG~~l~v~~~~~~~~-----------------~------------~~~i~v~~~~~-~g~~~~~~~~~~~~~~~- 308 (365)
T 1jof_A 260 CALTFSGKYMFASSRANKFE-----------------L------------QGYIAGFKLRD-CGSIEKQLFLSPTPTSG- 308 (365)
T ss_dssp EEECTTSSEEEEEEEESSTT-----------------S------------CCEEEEEEECT-TSCEEEEEEEEECSSCC-
T ss_pred EEECCCCCEEEEECCCCCCC-----------------C------------CCeEEEEEECC-CCCEEEeeeeeecCCCC-
Confidence 8 999997 77765431100 0 00113455555 7775432 3222111
Q ss_pred ccceeEEEE---ECCEEEEEecCCCeEEEEeCCC
Q 018705 313 ISFVTSAAE---FDGNLYLASLQSNFIGILPLDG 343 (351)
Q Consensus 313 ~~~~~~~~~---~~g~L~ig~~~~~~i~~~~~~~ 343 (351)
.. --++.. ++..||+++..++.|..+++..
T Consensus 309 ~~-~~a~sp~~~dg~~l~v~~~~~~~v~v~~~~~ 341 (365)
T 1jof_A 309 GH-SNAVSPCPWSDEWMAITDDQEGWLEIYRWKD 341 (365)
T ss_dssp TT-CCCEEECTTCTTEEEEECSSSCEEEEEEEET
T ss_pred cc-cceecCCCcCCCEEEEEEcCCCeEEEEEEch
Confidence 11 112334 4678998887667787776543
No 81
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=99.35 E-value=7.3e-11 Score=107.19 Aligned_cols=189 Identities=16% Similarity=0.159 Sum_probs=122.1
Q ss_pred CccccceEEcCCCCEEEEeCC-CCeEEEcCCC-eEEecCCCCCcccEEEccCCcEEEEeCCCccCCcccccccccccCCc
Q 018705 93 SQSLLGLTTTKDGGVILCDNE-KGLLKVTEEG-VEAIVPDASFTNDVIAASDGTLYFTVASTKYTPTDFYKDMAEGKPYG 170 (351)
Q Consensus 93 ~~p~~gl~~d~~G~L~v~d~~-~gl~~~~~~g-~~~l~~~~~~~n~l~~d~dG~ly~t~~~~~~~~~~~~~~~~~~~~~g 170 (351)
..|. ++++|++|+||+++.. +.++++++++ ..........|++++++++|++|+++... ...
T Consensus 32 ~~pe-gia~~~~g~lyv~d~~~~~I~~~d~~g~~~~~~~~~~~p~gia~~~dG~l~vad~~~---------------~~~ 95 (306)
T 2p4o_A 32 TFLE-NLASAPDGTIFVTNHEVGEIVSITPDGNQQIHATVEGKVSGLAFTSNGDLVATGWNA---------------DSI 95 (306)
T ss_dssp CCEE-EEEECTTSCEEEEETTTTEEEEECTTCCEEEEEECSSEEEEEEECTTSCEEEEEECT---------------TSC
T ss_pred CCcc-eEEECCCCCEEEEeCCCCeEEEECCCCceEEEEeCCCCceeEEEcCCCcEEEEeccC---------------Ccc
Confidence 5688 9999999999999954 5688888766 43332222679999999999999998531 013
Q ss_pred eEEEEeCCCCeEEEeec--CccccceEEEcCCCCEEEEEecce-eEEeecCCCCceeEE--e---------ccCCCCCCc
Q 018705 171 QLRKYDPKLKETTVLHE--GFYFANGIALSKNEDFVVVCESWK-RYWLKGDRAGILDAF--I---------ENLPGGPDN 236 (351)
Q Consensus 171 ~l~~~d~~~~~~~~~~~--~~~~~ngi~~~~dg~~lyv~~~~~-~~~i~~~~~~~~~~~--~---------~~~~g~pd~ 236 (351)
+|+++++.+++++.+.. ...+++|++..+++ .+|+++... +++..+...++.+++ . ..+ ..|++
T Consensus 96 ~v~~~d~~~g~~~~~~~~~~~~~~~g~~~~~~~-~~~v~d~~~g~i~~~d~~~~~~~v~~~~~~~~~~~~~~~~-~~png 173 (306)
T 2p4o_A 96 PVVSLVKSDGTVETLLTLPDAIFLNGITPLSDT-QYLTADSYRGAIWLIDVVQPSGSIWLEHPMLARSNSESVF-PAANG 173 (306)
T ss_dssp EEEEEECTTSCEEEEEECTTCSCEEEEEESSSS-EEEEEETTTTEEEEEETTTTEEEEEEECGGGSCSSTTCCS-CSEEE
T ss_pred eEEEEcCCCCeEEEEEeCCCccccCcccccCCC-cEEEEECCCCeEEEEeCCCCcEeEEEECCccccccccCCC-CcCCC
Confidence 69999987888766543 35678999987765 589998644 555443322222221 0 011 24677
Q ss_pred eEECCCC-CEEEEEecCCchhhhhhhcChhHHHHHHhccchhhcccCCCCCCceEEEEEECCC--CeE--EEEEECCCCC
Q 018705 237 INLAPDG-SFWIGLIKMNQTGVRAIQKCREKWELLDAYPGLISLLLPMGSDAGARVVKVDGND--GKI--IRDFNDPDAT 311 (351)
Q Consensus 237 i~~d~~G-~lwva~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~--g~~--~~~~~~~~g~ 311 (351)
+ +++| +||++.... ..|.+|+. + |+. .+.+.. .
T Consensus 174 i--s~dg~~lyv~d~~~------------------------------------~~I~~~~~-~~~g~~~~~~~~~~--~- 211 (306)
T 2p4o_A 174 L--KRFGNFLYVSNTEK------------------------------------MLLLRIPV-DSTDKPGEPEIFVE--Q- 211 (306)
T ss_dssp E--EEETTEEEEEETTT------------------------------------TEEEEEEB-CTTSCBCCCEEEEE--S-
T ss_pred c--CcCCCEEEEEeCCC------------------------------------CEEEEEEe-CCCCCCCccEEEec--c-
Confidence 7 4555 699987531 25777776 4 331 112211 0
Q ss_pred cccceeEEEEE-CCEEEEEecCCCeEEEEeCCC
Q 018705 312 YISFVTSAAEF-DGNLYLASLQSNFIGILPLDG 343 (351)
Q Consensus 312 ~~~~~~~~~~~-~g~L~ig~~~~~~i~~~~~~~ 343 (351)
.....++.+ +|+||++...+++|.+++..+
T Consensus 212 --~~P~gi~vd~dG~l~va~~~~~~V~~~~~~G 242 (306)
T 2p4o_A 212 --TNIDDFAFDVEGNLYGATHIYNSVVRIAPDR 242 (306)
T ss_dssp --CCCSSEEEBTTCCEEEECBTTCCEEEECTTC
T ss_pred --CCCCCeEECCCCCEEEEeCCCCeEEEECCCC
Confidence 112334443 678999999889999998654
No 82
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=99.33 E-value=1.5e-10 Score=107.67 Aligned_cols=184 Identities=11% Similarity=0.041 Sum_probs=116.1
Q ss_pred cCCCceEEEeeC---CCeEEEEEcC--------CEEEEEEcCCC--e---EEEE-e--e--cCCccccceEEcCCCCEEE
Q 018705 51 VNHPEDVSVVVS---KGALYTATRD--------GWVKYFILHNE--T---LVNW-K--H--IDSQSLLGLTTTKDGGVIL 109 (351)
Q Consensus 51 ~~~pe~i~~d~~---~g~lyv~~~~--------g~I~~~d~~~g--~---~~~~-~--~--~~~~p~~gl~~d~~G~L~v 109 (351)
..+|.+|+++|+ ++.||+.... ++|+|++..++ + .+.+ . . ....+. +|+++++|.||+
T Consensus 72 ~~g~~gia~~pdf~~~g~lyv~~~~~~~~~~~~~~v~r~~~~~~~~~~~~~~~l~~~~~~~~~h~~~-~l~~~pDG~Lyv 150 (354)
T 3a9g_A 72 EAGLLGLALHPEFPKKSWVYLYASYFAEGGHIRNRVIRGRLDGSTFKLKEVKTLIDGIPGAYIHNGG-RIRFGPDGMLYI 150 (354)
T ss_dssp TCSEEEEEECTTTTTSCEEEEEEEEECGGGCEEEEEEEEEECSSSCCEEEEEEEEEEEECCSSCCCC-CEEECTTSCEEE
T ss_pred CCceeeEEeCCCCCcCCEEEEEEeccCCCCCcceEEEEEEECCCCcCcCccEEEEEcCCCCCCcCCc-eEEECCCCcEEE
Confidence 467999999976 6899997653 78999997554 1 2222 1 1 123467 899999999999
Q ss_pred EeCC--------------CCeEEEcCCC-e---------EEecCCCCCcccEEEcc-CCcEEEEeCCCccCCcccccccc
Q 018705 110 CDNE--------------KGLLKVTEEG-V---------EAIVPDASFTNDVIAAS-DGTLYFTVASTKYTPTDFYKDMA 164 (351)
Q Consensus 110 ~d~~--------------~gl~~~~~~g-~---------~~l~~~~~~~n~l~~d~-dG~ly~t~~~~~~~~~~~~~~~~ 164 (351)
+... ..+++++++| + ++++.....|+++++|+ +|+||+++.....
T Consensus 151 t~G~~~~~~~~~d~~~~~G~I~ri~~dG~~p~~npf~~~~i~a~G~rnp~Gla~d~~~g~l~v~d~g~~~---------- 220 (354)
T 3a9g_A 151 TTGDAADPRLAQDLSSLAGKILRVDEEGRPPADNPFPNSPIWSYGHRNPQGIDWHRASGVMVATEHGPVG---------- 220 (354)
T ss_dssp ECCCTTCGGGGTCTTCCSSEEEEECTTSCCCTTSSSTTCCEEEECCSCCCEEEECTTTCCEEEEECCSSS----------
T ss_pred EECCCCCCccccCCCCCCeEEEEEcCCCCCCCCCCCCCCcEEEEccCCcceEEEeCCCCCEEEEecCCCC----------
Confidence 8642 2588888766 3 44555557899999999 7999999975221
Q ss_pred cccCCceEEEEeCCC--------------CeE---EEeecCccccceEEE-------cCCCCEEEEEecce-eEEe---e
Q 018705 165 EGKPYGQLRKYDPKL--------------KET---TVLHEGFYFANGIAL-------SKNEDFVVVCESWK-RYWL---K 216 (351)
Q Consensus 165 ~~~~~g~l~~~d~~~--------------~~~---~~~~~~~~~~ngi~~-------~~dg~~lyv~~~~~-~~~i---~ 216 (351)
...|.++.+.. +.. ..+......|.|+++ ..+| .+|+++... +++. .
T Consensus 221 ----~dei~~i~~G~nyGwp~~~g~~~~~~~~~p~~~~~~~~~ap~G~~~y~g~~fp~~~G-~l~v~~~~~~~v~~~~~~ 295 (354)
T 3a9g_A 221 ----HDEVNIILKGGNYGWPLATGKAGRGEFVDPVIDTGSETWAPSGASFVHGDMFPGLRG-WLLIACLRGSMLAAVNFG 295 (354)
T ss_dssp ----CCEEEEECTTCBCCTTTCCSCCCCTTSCCCSEECTTCCCCEEEEEECCSSSCGGGTT-EEEEEETTTTEEEEEEEC
T ss_pred ----CcEEEEecCCCcCCCCcccCCCCCCCCcCCEeecCCCCcCCcceEEECCCCCcccCC-cEEEEEcCCCEEEEEEEC
Confidence 01122222110 000 011012346889999 3566 499998766 4443 3
Q ss_pred cC-CCCceeEEeccCCCCCCceEECCCCCEEEEEe
Q 018705 217 GD-RAGILDAFIENLPGGPDNINLAPDGSFWIGLI 250 (351)
Q Consensus 217 ~~-~~~~~~~~~~~~~g~pd~i~~d~~G~lwva~~ 250 (351)
+. .....+.+.....+.|.++++++||.||+++.
T Consensus 296 ~~g~~~~~~~~~~~~~~rp~~v~~~pDG~lyv~~~ 330 (354)
T 3a9g_A 296 DNMEVRKISTFFKNVFGRLRDVVIDDDGGILISTS 330 (354)
T ss_dssp GGGCEEEEEEECTTTSCCEEEEEECTTSCEEEEEC
T ss_pred CCCcccceeeeccCCCCCeeEEEECCCCcEEEEEe
Confidence 21 11112333323345688999999999999985
No 83
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=99.31 E-value=2.3e-10 Score=101.49 Aligned_cols=194 Identities=11% Similarity=0.109 Sum_probs=130.5
Q ss_pred ccccceEEcCCCCEEEEeC---CCCeEEEcC-CC--eEEecCC-CCCcccEEEccCCcEEEEeCCCccCCcccccccccc
Q 018705 94 QSLLGLTTTKDGGVILCDN---EKGLLKVTE-EG--VEAIVPD-ASFTNDVIAASDGTLYFTVASTKYTPTDFYKDMAEG 166 (351)
Q Consensus 94 ~p~~gl~~d~~G~L~v~d~---~~gl~~~~~-~g--~~~l~~~-~~~~n~l~~d~dG~ly~t~~~~~~~~~~~~~~~~~~ 166 (351)
.|. ||+++++|+||+++. .+.+..++. +| ...+... ..++.+++++ ++++|+++..
T Consensus 22 f~~-Gl~~~~dg~Lyvstg~~~~s~v~~iD~~tg~v~~~i~l~~~~fgeGi~~~-g~~lyv~t~~--------------- 84 (266)
T 2iwa_A 22 FTQ-GLVYAENDTLFESTGLYGRSSVRQVALQTGKVENIHKMDDSYFGEGLTLL-NEKLYQVVWL--------------- 84 (266)
T ss_dssp CEE-EEEECSTTEEEEEECSTTTCEEEEEETTTCCEEEEEECCTTCCEEEEEEE-TTEEEEEETT---------------
T ss_pred Ccc-cEEEeCCCeEEEECCCCCCCEEEEEECCCCCEEEEEecCCCcceEEEEEe-CCEEEEEEec---------------
Confidence 478 999999899999975 246888884 66 4443322 2456677776 3489999865
Q ss_pred cCCceEEEEeCCCCeEEEeecCccccceEEEcCCCCEEEEEecceeEEeecCCCCce-e-EEecc--CC-CCCCceEECC
Q 018705 167 KPYGQLRKYDPKLKETTVLHEGFYFANGIALSKNEDFVVVCESWKRYWLKGDRAGIL-D-AFIEN--LP-GGPDNINLAP 241 (351)
Q Consensus 167 ~~~g~l~~~d~~~~~~~~~~~~~~~~ngi~~~~dg~~lyv~~~~~~~~i~~~~~~~~-~-~~~~~--~~-g~pd~i~~d~ 241 (351)
.+.+++||+++.++..-.... .|.|+.+++||+.+|+++..+++++-+....+. . +.... .+ ..++++.+.
T Consensus 85 --~~~v~viD~~t~~v~~~i~~g-~~~g~glt~Dg~~l~vs~gs~~l~viD~~t~~v~~~I~Vg~~~~p~~~~nele~~- 160 (266)
T 2iwa_A 85 --KNIGFIYDRRTLSNIKNFTHQ-MKDGWGLATDGKILYGSDGTSILYEIDPHTFKLIKKHNVKYNGHRVIRLNELEYI- 160 (266)
T ss_dssp --CSEEEEEETTTTEEEEEEECC-SSSCCEEEECSSSEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-
T ss_pred --CCEEEEEECCCCcEEEEEECC-CCCeEEEEECCCEEEEECCCCeEEEEECCCCcEEEEEEECCCCcccccceeEEEE-
Confidence 568999999887654333222 467788888999999998545555444332222 1 11111 11 135677776
Q ss_pred CCCEEEEEecCCchhhhhhhcChhHHHHHHhccchhhcccCCCCCCceEEEEEECCCCeEEEEEECCC--------C-Cc
Q 018705 242 DGSFWIGLIKMNQTGVRAIQKCREKWELLDAYPGLISLLLPMGSDAGARVVKVDGNDGKIIRDFNDPD--------A-TY 312 (351)
Q Consensus 242 ~G~lwva~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~g~~~~~~~~~~--------g-~~ 312 (351)
+|.+|++.... ..|.++|+++|+++..+.-+. + ..
T Consensus 161 dg~lyvn~~~~------------------------------------~~V~vID~~tg~V~~~I~~~g~~~~~~~~~~~~ 204 (266)
T 2iwa_A 161 NGEVWANIWQT------------------------------------DCIARISAKDGTLLGWILLPNLRKKLIDEGFRD 204 (266)
T ss_dssp TTEEEEEETTS------------------------------------SEEEEEETTTCCEEEEEECHHHHHHHHHTTCTT
T ss_pred CCEEEEecCCC------------------------------------CeEEEEECCCCcEEEEEECCCcccccccccccc
Confidence 78999886431 369999999999999886421 0 01
Q ss_pred ccceeEEEEE--CCEEEEEecCCCeEEEEeCCCC
Q 018705 313 ISFVTSAAEF--DGNLYLASLQSNFIGILPLDGP 344 (351)
Q Consensus 313 ~~~~~~~~~~--~g~L~ig~~~~~~i~~~~~~~~ 344 (351)
.....++..+ +++||++....+.+..+++...
T Consensus 205 ~~v~nGIa~~~~~~~lfVTgk~~~~v~~i~l~~~ 238 (266)
T 2iwa_A 205 IDVLNGIAWDQENKRIFVTGKLWPKLFEIKLHLV 238 (266)
T ss_dssp CCCEEEEEEETTTTEEEEEETTCSEEEEEEEEEC
T ss_pred cCceEEEEEcCCCCEEEEECCCCCeEEEEEEecc
Confidence 1345677665 4689999999999999997655
No 84
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=99.30 E-value=6.4e-09 Score=96.64 Aligned_cols=219 Identities=13% Similarity=0.180 Sum_probs=143.5
Q ss_pred eEEE-EEcCCEEEEEEcCCCeEEEEeecCCccccceEEcCCCC-EEEEeCCCCeEEE-cC-CC--eEEecCCCCCcccEE
Q 018705 65 ALYT-ATRDGWVKYFILHNETLVNWKHIDSQSLLGLTTTKDGG-VILCDNEKGLLKV-TE-EG--VEAIVPDASFTNDVI 138 (351)
Q Consensus 65 ~lyv-~~~~g~I~~~d~~~g~~~~~~~~~~~p~~gl~~d~~G~-L~v~d~~~gl~~~-~~-~g--~~~l~~~~~~~n~l~ 138 (351)
.+|+ +..++.|..||..+++..........+. +++++++|+ ||++....+.+++ +. ++ ...+... ..+++++
T Consensus 3 ~l~vs~~~d~~v~v~d~~~~~~~~~~~~~~~~~-~~~~s~dg~~l~~~~~~d~~i~v~d~~~~~~~~~~~~~-~~v~~~~ 80 (391)
T 1l0q_A 3 FAYIANSESDNISVIDVTSNKVTATIPVGSNPM-GAVISPDGTKVYVANAHSNDVSIIDTATNNVIATVPAG-SSPQGVA 80 (391)
T ss_dssp EEEEEETTTTEEEEEETTTTEEEEEEECSSSEE-EEEECTTSSEEEEEEGGGTEEEEEETTTTEEEEEEECS-SSEEEEE
T ss_pred EEEEEcCCCCEEEEEECCCCeEEEEeecCCCcc-eEEECCCCCEEEEECCCCCeEEEEECCCCeEEEEEECC-CCccceE
Confidence 4444 5568999999998887755444455688 999999996 5677644454444 43 55 3434333 4789999
Q ss_pred EccCCc-EEEEeCCCccCCcccccccccccCCceEEEEeCCCCeEEEeecCccccceEEEcCCCCEEEEEecce-eEEee
Q 018705 139 AASDGT-LYFTVASTKYTPTDFYKDMAEGKPYGQLRKYDPKLKETTVLHEGFYFANGIALSKNEDFVVVCESWK-RYWLK 216 (351)
Q Consensus 139 ~d~dG~-ly~t~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~~~~~~~~~~~~~~ngi~~~~dg~~lyv~~~~~-~~~i~ 216 (351)
++++|. +|++... .+.|+.||..+++..........+.+++++++++.+|++.... .+.+-
T Consensus 81 ~spdg~~l~~~~~~-----------------~~~v~v~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~ 143 (391)
T 1l0q_A 81 VSPDGKQVYVTNMA-----------------SSTLSVIDTTSNTVAGTVKTGKSPLGLALSPDGKKLYVTNNGDKTVSVI 143 (391)
T ss_dssp ECTTSSEEEEEETT-----------------TTEEEEEETTTTEEEEEEECSSSEEEEEECTTSSEEEEEETTTTEEEEE
T ss_pred ECCCCCEEEEEECC-----------------CCEEEEEECCCCeEEEEEeCCCCcceEEECCCCCEEEEEeCCCCEEEEE
Confidence 999995 7777643 4689999999888766555556788999999999888876544 33332
Q ss_pred cCCCCceeEEeccCCCCCCceEECCCCC-EEEEEecCCchhhhhhhcChhHHHHHHhccchhhcccCCCCCCceEEEEEE
Q 018705 217 GDRAGILDAFIENLPGGPDNINLAPDGS-FWIGLIKMNQTGVRAIQKCREKWELLDAYPGLISLLLPMGSDAGARVVKVD 295 (351)
Q Consensus 217 ~~~~~~~~~~~~~~~g~pd~i~~d~~G~-lwva~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 295 (351)
+...++...... ....+..++++++|+ +|++... .+.|..+|
T Consensus 144 d~~~~~~~~~~~-~~~~~~~~~~~~dg~~l~~~~~~------------------------------------~~~v~~~d 186 (391)
T 1l0q_A 144 NTVTKAVINTVS-VGRSPKGIAVTPDGTKVYVANFD------------------------------------SMSISVID 186 (391)
T ss_dssp ETTTTEEEEEEE-CCSSEEEEEECTTSSEEEEEETT------------------------------------TTEEEEEE
T ss_pred ECCCCcEEEEEe-cCCCcceEEECCCCCEEEEEeCC------------------------------------CCEEEEEE
Confidence 322333222221 223467789999996 6666432 13577788
Q ss_pred CCCCeEEEEEECCCCCcccceeEEEEE--CCEEEEEec--CCCeEEEEeCCCC
Q 018705 296 GNDGKIIRDFNDPDATYISFVTSAAEF--DGNLYLASL--QSNFIGILPLDGP 344 (351)
Q Consensus 296 ~~~g~~~~~~~~~~g~~~~~~~~~~~~--~g~L~ig~~--~~~~i~~~~~~~~ 344 (351)
..+++....+.... .+..+... +..||+++. ..+.|..+++.+.
T Consensus 187 ~~~~~~~~~~~~~~-----~~~~~~~~~~g~~l~~~~~~~~~~~v~~~d~~~~ 234 (391)
T 1l0q_A 187 TVTNSVIDTVKVEA-----APSGIAVNPEGTKAYVTNVDKYFNTVSMIDTGTN 234 (391)
T ss_dssp TTTTEEEEEEECSS-----EEEEEEECTTSSEEEEEEECSSCCEEEEEETTTT
T ss_pred CCCCeEEEEEecCC-----CccceEECCCCCEEEEEecCcCCCcEEEEECCCC
Confidence 75666666664321 34455543 456888875 4678888887654
No 85
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=99.30 E-value=3.9e-10 Score=104.68 Aligned_cols=153 Identities=12% Similarity=0.094 Sum_probs=100.4
Q ss_pred eEEEEeecCCccccceEEcCCCCEEEEeCCCCeEEEcCCC-eEEec------CCCCCcccEEEccC----CcEEEEeCCC
Q 018705 84 TLVNWKHIDSQSLLGLTTTKDGGVILCDNEKGLLKVTEEG-VEAIV------PDASFTNDVIAASD----GTLYFTVAST 152 (351)
Q Consensus 84 ~~~~~~~~~~~p~~gl~~d~~G~L~v~d~~~gl~~~~~~g-~~~l~------~~~~~~n~l~~d~d----G~ly~t~~~~ 152 (351)
+++.+......|. +|+++++|+|||++..+.+++++ +| .+.+. .....|++|++++| |.||+++...
T Consensus 22 ~~~~va~~l~~P~-~ia~~pdG~l~V~e~~g~I~~i~-~g~~~~~~~~~v~~~g~~~p~gia~~pdf~~~g~lYv~~~~~ 99 (352)
T 2ism_A 22 RVEEVVGGLEVPW-ALAFLPDGGMLIAERPGRIRLFR-EGRLSTYAELSVYHRGESGLLGLALHPRFPQEPYVYAYRTVA 99 (352)
T ss_dssp CEEEEECCCSCEE-EEEECTTSCEEEEETTTEEEEEE-TTEEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEEC
T ss_pred EEEEEECCCCCce-EEEEcCCCeEEEEeCCCeEEEEE-CCCccEeecceEeecCCCCceeEEECCCCCCCCEEEEEEecC
Confidence 4455554456799 99999999999999887787777 56 44332 12368999999998 7899998631
Q ss_pred ccCCcccccccccccCCceEEEEeCCCCe---EEEeec-------CccccceEEEcCCCCEEEEEecc------------
Q 018705 153 KYTPTDFYKDMAEGKPYGQLRKYDPKLKE---TTVLHE-------GFYFANGIALSKNEDFVVVCESW------------ 210 (351)
Q Consensus 153 ~~~~~~~~~~~~~~~~~g~l~~~d~~~~~---~~~~~~-------~~~~~ngi~~~~dg~~lyv~~~~------------ 210 (351)
.- ...++|++|+.+.++ .+.+.. ....+++|++++||. ||++...
T Consensus 100 ~~------------~~~~~v~r~~~~~~~~~~~~~l~~~~p~~~~~~h~~~~l~~~pdG~-Lyv~~G~~~~~~~~~d~~~ 166 (352)
T 2ism_A 100 EG------------GLRNQVVRLRHLGERGVLDRVVLDGIPARPHGLHSGGRIAFGPDGM-LYVTTGEVYERELAQDLAS 166 (352)
T ss_dssp TT------------SSEEEEEEEEECSSCEEEEEEEEEEECCCTTCCCCCCCEEECTTSC-EEEECCCTTCGGGGGCTTC
T ss_pred CC------------CCccEEEEEEeCCCCcCceEEEEEeCCCCCCCCcCCceEEECCCCC-EEEEECCCCCCccccCCCC
Confidence 00 012578888876442 222221 234688999999996 9998631
Q ss_pred --ee-EEeecCC-C-----------CceeEEeccCCCCCCceEECC-CCCEEEEEecC
Q 018705 211 --KR-YWLKGDR-A-----------GILDAFIENLPGGPDNINLAP-DGSFWIGLIKM 252 (351)
Q Consensus 211 --~~-~~i~~~~-~-----------~~~~~~~~~~~g~pd~i~~d~-~G~lwva~~~~ 252 (351)
++ +.+.... . ...+++...+. .|.++++|+ +|+||++....
T Consensus 167 ~~g~I~ri~~dG~~p~~npf~~~~~~~~~i~a~G~r-np~g~a~d~~~g~l~v~d~g~ 223 (352)
T 2ism_A 167 LGGKILRLTPEGEPAPGNPFLGRRGARPEVYSLGHR-NPQGLAWHPKTGELFSSEHGP 223 (352)
T ss_dssp SSSEEEEECTTSSBCTTCTTTTCTTSCTTEEEECCS-EECCCEECTTTCCEEEEEECC
T ss_pred CceEEEEEcCCCCCCCCCcccCCCCCCccEEEEcCC-CcccEEEECCCCCEEEEEcCC
Confidence 12 3332110 0 13345544332 488999999 79999998753
No 86
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.29 E-value=2.2e-09 Score=97.10 Aligned_cols=225 Identities=11% Similarity=-0.002 Sum_probs=144.8
Q ss_pred CCceEEEeeCCCeEEEEEc-CCEEEEEEcCCCeEEEEeecCC------ccccceEEcCCC-CEEEEe------------C
Q 018705 53 HPEDVSVVVSKGALYTATR-DGWVKYFILHNETLVNWKHIDS------QSLLGLTTTKDG-GVILCD------------N 112 (351)
Q Consensus 53 ~pe~i~~d~~~g~lyv~~~-~g~I~~~d~~~g~~~~~~~~~~------~p~~gl~~d~~G-~L~v~d------------~ 112 (351)
.|.+++++|+++.+|+... ++.|..+|..+++......... .|. +++++++| .||+++ .
T Consensus 35 ~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~-~~~~s~dg~~l~~~~~~~~~~~~~~~~~ 113 (337)
T 1pby_B 35 TPMVPMVAPGGRIAYATVNKSESLVKIDLVTGETLGRIDLSTPEERVKSLF-GAALSPDGKTLAIYESPVRLELTHFEVQ 113 (337)
T ss_dssp CCCCEEECTTSSEEEEEETTTTEEEEEETTTCCEEEEEECCBTTEEEECTT-CEEECTTSSEEEEEEEEEEECSSCEEEC
T ss_pred CccceEEcCCCCEEEEEeCCCCeEEEEECCCCCeEeeEEcCCccccccccc-ceEECCCCCEEEEEeccccccccccccc
Confidence 4899999977778887654 6899999988887643222222 688 99999999 578875 2
Q ss_pred CCCeEEEcC-CC--eEEecCCCCCcccEEEccCCc-EEEEeCCCccCCcccccccccccCCceEEEEeCCCCeEEEeecC
Q 018705 113 EKGLLKVTE-EG--VEAIVPDASFTNDVIAASDGT-LYFTVASTKYTPTDFYKDMAEGKPYGQLRKYDPKLKETTVLHEG 188 (351)
Q Consensus 113 ~~gl~~~~~-~g--~~~l~~~~~~~n~l~~d~dG~-ly~t~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~~~~~~~~~~ 188 (351)
...+..++. ++ ...+... ..+.++++++||+ +|+++ +.|+.||.++++.......
T Consensus 114 ~~~i~v~d~~~~~~~~~~~~~-~~~~~~~~s~dg~~l~~~~--------------------~~i~~~d~~~~~~~~~~~~ 172 (337)
T 1pby_B 114 PTRVALYDAETLSRRKAFEAP-RQITMLAWARDGSKLYGLG--------------------RDLHVMDPEAGTLVEDKPI 172 (337)
T ss_dssp CCEEEEEETTTTEEEEEEECC-SSCCCEEECTTSSCEEEES--------------------SSEEEEETTTTEEEEEECS
T ss_pred CceEEEEECCCCcEEEEEeCC-CCcceeEECCCCCEEEEeC--------------------CeEEEEECCCCcEeeeeec
Confidence 356777774 55 3333332 5789999999996 88772 3699999888876544433
Q ss_pred ccccceEEEcCCCCEEEEEecce-e-----------------------EEeecCCCCceeEE-eccCCCCCCceEECCCC
Q 018705 189 FYFANGIALSKNEDFVVVCESWK-R-----------------------YWLKGDRAGILDAF-IENLPGGPDNINLAPDG 243 (351)
Q Consensus 189 ~~~~ngi~~~~dg~~lyv~~~~~-~-----------------------~~i~~~~~~~~~~~-~~~~~g~pd~i~~d~~G 243 (351)
...+..++++||++.+|++.... . +++-+...++.... .......+.+++++++|
T Consensus 173 ~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg 252 (337)
T 1pby_B 173 QSWEAETYAQPDVLAVWNQHESSGVMATPFYTARKDIDPADPTAYRTGLLTMDLETGEMAMREVRIMDVFYFSTAVNPAK 252 (337)
T ss_dssp TTTTTTTBCCCBCCCCCCCCTTTTEEEEEEEEEBTTSCTTSGGGEEEEEEEEETTTCCEEEEEEEECSSCEEEEEECTTS
T ss_pred cccCCCceeCCCccEEeeeccCCCceeeeeeccccccccccccccccceEEEeCCCCCceEeecCCCCCceeeEEECCCC
Confidence 33234557889988777765432 1 12222222222211 11122345678999999
Q ss_pred C-EEEEEecCCchhhhhhhcChhHHHHHHhccchhhcccCCCCCCceEEEEEECCCCeEEEEEECCCCCcccceeEEEEE
Q 018705 244 S-FWIGLIKMNQTGVRAIQKCREKWELLDAYPGLISLLLPMGSDAGARVVKVDGNDGKIIRDFNDPDATYISFVTSAAEF 322 (351)
Q Consensus 244 ~-lwva~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~g~~~~~~~~~~g~~~~~~~~~~~~ 322 (351)
+ +|++ . +.|..+|.++++.+..+..+. .+.++...
T Consensus 253 ~~l~~~--~-------------------------------------~~v~~~d~~~~~~~~~~~~~~-----~~~~~~~s 288 (337)
T 1pby_B 253 TRAFGA--Y-------------------------------------NVLESFDLEKNASIKRVPLPH-----SYYSVNVS 288 (337)
T ss_dssp SEEEEE--E-------------------------------------SEEEEEETTTTEEEEEEECSS-----CCCEEEEC
T ss_pred CEEEEe--C-------------------------------------CeEEEEECCCCcCcceecCCC-----ceeeEEEC
Confidence 7 6665 1 257888986678777776432 23445543
Q ss_pred --CCEEEEEecCCCeEEEEeCCCC
Q 018705 323 --DGNLYLASLQSNFIGILPLDGP 344 (351)
Q Consensus 323 --~g~L~ig~~~~~~i~~~~~~~~ 344 (351)
+..||+++. .+.|.++++.+.
T Consensus 289 ~dg~~l~~~~~-~~~i~v~d~~~~ 311 (337)
T 1pby_B 289 TDGSTVWLGGA-LGDLAAYDAETL 311 (337)
T ss_dssp TTSCEEEEESB-SSEEEEEETTTC
T ss_pred CCCCEEEEEcC-CCcEEEEECcCC
Confidence 456888855 678988887654
No 87
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=99.28 E-value=1.8e-09 Score=101.76 Aligned_cols=232 Identities=11% Similarity=0.060 Sum_probs=152.0
Q ss_pred CCCceEEEeeCCCeEEEEE-cCCEEEEEEcCCCeEEEEee------cCCccccceEEcCCCCEEEEeCCCCeEEEc-C-C
Q 018705 52 NHPEDVSVVVSKGALYTAT-RDGWVKYFILHNETLVNWKH------IDSQSLLGLTTTKDGGVILCDNEKGLLKVT-E-E 122 (351)
Q Consensus 52 ~~pe~i~~d~~~g~lyv~~-~~g~I~~~d~~~g~~~~~~~------~~~~p~~gl~~d~~G~L~v~d~~~gl~~~~-~-~ 122 (351)
..|.+++++| ++.+|++. .++.|..||..+++...... ....+. +++++++|++|++....+.+++. . +
T Consensus 123 ~~~~~~~~s~-~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~v~-~~~~~~~~~~~~s~~~d~~v~~~d~~~ 200 (433)
T 3bws_A 123 FQPKSVRFID-NTRLAIPLLEDEGMDVLDINSGQTVRLSPPEKYKKKLGFVE-TISIPEHNELWVSQMQANAVHVFDLKT 200 (433)
T ss_dssp SCBCCCEESS-SSEEEEEBTTSSSEEEEETTTCCEEEECCCHHHHTTCCEEE-EEEEGGGTEEEEEEGGGTEEEEEETTT
T ss_pred CCceEEEEeC-CCeEEEEeCCCCeEEEEECCCCeEeeecCcccccccCCcee-EEEEcCCCEEEEEECCCCEEEEEECCC
Confidence 3477899996 77777655 46679999998887654321 123455 78999999999988765555554 3 4
Q ss_pred C--eEEecCCCCCcccEEEccCCc-EEEEeCCCccCCcccccccccccCCceEEEEeCCCCeEEEeecCccccceEEEcC
Q 018705 123 G--VEAIVPDASFTNDVIAASDGT-LYFTVASTKYTPTDFYKDMAEGKPYGQLRKYDPKLKETTVLHEGFYFANGIALSK 199 (351)
Q Consensus 123 g--~~~l~~~~~~~n~l~~d~dG~-ly~t~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~~~~~~~~~~~~~~ngi~~~~ 199 (351)
+ ...+......+.+++++++|. +|++... .+.|..||..+++..........+.+++++|
T Consensus 201 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-----------------~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~ 263 (433)
T 3bws_A 201 LAYKATVDLTGKWSKILLYDPIRDLVYCSNWI-----------------SEDISVIDRKTKLEIRKTDKIGLPRGLLLSK 263 (433)
T ss_dssp CCEEEEEECSSSSEEEEEEETTTTEEEEEETT-----------------TTEEEEEETTTTEEEEECCCCSEEEEEEECT
T ss_pred ceEEEEEcCCCCCeeEEEEcCCCCEEEEEecC-----------------CCcEEEEECCCCcEEEEecCCCCceEEEEcC
Confidence 4 444443336789999999985 6666643 4689999998887655555555689999999
Q ss_pred CCCEEEEEec--------ceeEEeecCCCCceeEEeccCCCCCCceEECCCCC-EEEEEecCCchhhhhhhcChhHHHHH
Q 018705 200 NEDFVVVCES--------WKRYWLKGDRAGILDAFIENLPGGPDNINLAPDGS-FWIGLIKMNQTGVRAIQKCREKWELL 270 (351)
Q Consensus 200 dg~~lyv~~~--------~~~~~i~~~~~~~~~~~~~~~~g~pd~i~~d~~G~-lwva~~~~~~~~~~~~~~~~~~~~~~ 270 (351)
+++.++++.. ++.+.+-+...++..... ..++.+.+++++++|+ +|++...
T Consensus 264 ~g~~l~~~~~~~~~~~~~dg~i~~~d~~~~~~~~~~-~~~~~~~~~~~~~~g~~l~~~~~~------------------- 323 (433)
T 3bws_A 264 DGKELYIAQFSASNQESGGGRLGIYSMDKEKLIDTI-GPPGNKRHIVSGNTENKIYVSDMC------------------- 323 (433)
T ss_dssp TSSEEEEEEEESCTTCSCCEEEEEEETTTTEEEEEE-EEEECEEEEEECSSTTEEEEEETT-------------------
T ss_pred CCCEEEEEECCCCccccCCCeEEEEECCCCcEEeec-cCCCCcceEEECCCCCEEEEEecC-------------------
Confidence 9998888773 333322222223322111 1223467889999995 7777532
Q ss_pred HhccchhhcccCCCCCCceEEEEEECCCCeEEEEEECCCCCcccceeEEEEE--CCEEEEEecCCC--------------
Q 018705 271 DAYPGLISLLLPMGSDAGARVVKVDGNDGKIIRDFNDPDATYISFVTSAAEF--DGNLYLASLQSN-------------- 334 (351)
Q Consensus 271 ~~~~~~~~~~~~~~~~~~~~v~~~~~~~g~~~~~~~~~~g~~~~~~~~~~~~--~g~L~ig~~~~~-------------- 334 (351)
.+.+..+|..+++.+..+... ..+..+... +..||+++...+
T Consensus 324 -----------------~~~v~v~d~~~~~~~~~~~~~-----~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~g~~dg 381 (433)
T 3bws_A 324 -----------------CSKIEVYDLKEKKVQKSIPVF-----DKPNTIALSPDGKYLYVSCRGPNHPTEGYLKKGLVLG 381 (433)
T ss_dssp -----------------TTEEEEEETTTTEEEEEEECS-----SSEEEEEECTTSSEEEEEECCCCCTTTCTTSCCSSCC
T ss_pred -----------------CCEEEEEECCCCcEEEEecCC-----CCCCeEEEcCCCCEEEEEecCCCccccccccccccce
Confidence 235788888567777766532 135555554 346888876532
Q ss_pred eEEEEeCCCC
Q 018705 335 FIGILPLDGP 344 (351)
Q Consensus 335 ~i~~~~~~~~ 344 (351)
.|..+++.+.
T Consensus 382 ~v~~~d~~~~ 391 (433)
T 3bws_A 382 KVYVIDTTTD 391 (433)
T ss_dssp EEEEEETTTT
T ss_pred EEEEEECCCC
Confidence 7888887653
No 88
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=99.28 E-value=6.7e-09 Score=97.86 Aligned_cols=249 Identities=14% Similarity=0.100 Sum_probs=154.6
Q ss_pred CceEEEeeCCCeEE-EEEcCCEEEEEEcCCCeEE-EEeecCCccccceEEcCCCC-EEEEeCCCC-eEEEcC-CC--eEE
Q 018705 54 PEDVSVVVSKGALY-TATRDGWVKYFILHNETLV-NWKHIDSQSLLGLTTTKDGG-VILCDNEKG-LLKVTE-EG--VEA 126 (351)
Q Consensus 54 pe~i~~d~~~g~ly-v~~~~g~I~~~d~~~g~~~-~~~~~~~~p~~gl~~d~~G~-L~v~d~~~g-l~~~~~-~g--~~~ 126 (351)
..++++++ ++.+| ++..++.|..||..+++.. .+......+. +++++++|+ +|++....+ +..++. ++ ...
T Consensus 172 v~~~~~~~-~~~~~~s~~~d~~v~~~d~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~~~~~~~~i~~~d~~~~~~~~~ 249 (433)
T 3bws_A 172 VETISIPE-HNELWVSQMQANAVHVFDLKTLAYKATVDLTGKWSK-ILLYDPIRDLVYCSNWISEDISVIDRKTKLEIRK 249 (433)
T ss_dssp EEEEEEGG-GTEEEEEEGGGTEEEEEETTTCCEEEEEECSSSSEE-EEEEETTTTEEEEEETTTTEEEEEETTTTEEEEE
T ss_pred eeEEEEcC-CCEEEEEECCCCEEEEEECCCceEEEEEcCCCCCee-EEEEcCCCCEEEEEecCCCcEEEEECCCCcEEEE
Confidence 45688874 55554 5667899999998777653 3333445677 999999986 557765444 555553 55 333
Q ss_pred ecCCCCCcccEEEccCCc-EEEEeCCCccCCcccccccccccCCceEEEEeCCCCeEEEeecCccccceEEEcCCCCEEE
Q 018705 127 IVPDASFTNDVIAASDGT-LYFTVASTKYTPTDFYKDMAEGKPYGQLRKYDPKLKETTVLHEGFYFANGIALSKNEDFVV 205 (351)
Q Consensus 127 l~~~~~~~n~l~~d~dG~-ly~t~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~~~~~~~~~~~~~~ngi~~~~dg~~ly 205 (351)
+... ..+.+++++++|. +|++...... + ...+|.|+.||..+++..........+.+++++|+++.+|
T Consensus 250 ~~~~-~~~~~~~~~~~g~~l~~~~~~~~~--------~--~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~g~~l~ 318 (433)
T 3bws_A 250 TDKI-GLPRGLLLSKDGKELYIAQFSASN--------Q--ESGGGRLGIYSMDKEKLIDTIGPPGNKRHIVSGNTENKIY 318 (433)
T ss_dssp CCCC-SEEEEEEECTTSSEEEEEEEESCT--------T--CSCCEEEEEEETTTTEEEEEEEEEECEEEEEECSSTTEEE
T ss_pred ecCC-CCceEEEEcCCCCEEEEEECCCCc--------c--ccCCCeEEEEECCCCcEEeeccCCCCcceEEECCCCCEEE
Confidence 3332 5689999999994 6665532100 0 0125689999998887655443344688999999998888
Q ss_pred EEecce-eEEeecCCCCceeEEeccCCCCCCceEECCCCC-EEEEEecCCchhhhhhhcChhHHHHHHhccchhhcccCC
Q 018705 206 VCESWK-RYWLKGDRAGILDAFIENLPGGPDNINLAPDGS-FWIGLIKMNQTGVRAIQKCREKWELLDAYPGLISLLLPM 283 (351)
Q Consensus 206 v~~~~~-~~~i~~~~~~~~~~~~~~~~g~pd~i~~d~~G~-lwva~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 283 (351)
++.... .+.+-+...++...... ....+..++++++|+ +|++....+...... + .
T Consensus 319 ~~~~~~~~v~v~d~~~~~~~~~~~-~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~-----------------~-----~ 375 (433)
T 3bws_A 319 VSDMCCSKIEVYDLKEKKVQKSIP-VFDKPNTIALSPDGKYLYVSCRGPNHPTEGY-----------------L-----K 375 (433)
T ss_dssp EEETTTTEEEEEETTTTEEEEEEE-CSSSEEEEEECTTSSEEEEEECCCCCTTTCT-----------------T-----S
T ss_pred EEecCCCEEEEEECCCCcEEEEec-CCCCCCeEEEcCCCCEEEEEecCCCcccccc-----------------c-----c
Confidence 886544 33332322233222221 233467889999997 777764321100000 0 0
Q ss_pred CCCCceEEEEEECCCCeEEEEEECCCCCcccceeEEEEE--CCEEEEEecCCCeEEEEeCCC
Q 018705 284 GSDAGARVVKVDGNDGKIIRDFNDPDATYISFVTSAAEF--DGNLYLASLQSNFIGILPLDG 343 (351)
Q Consensus 284 ~~~~~~~v~~~~~~~g~~~~~~~~~~g~~~~~~~~~~~~--~g~L~ig~~~~~~i~~~~~~~ 343 (351)
.+...+.|..+|.++++.+..+... ..+..+... +..|++++...+.|..+++.+
T Consensus 376 ~g~~dg~v~~~d~~~~~~~~~~~~~-----~~~~~~~~s~dg~~l~~~~~~d~~i~v~~~~~ 432 (433)
T 3bws_A 376 KGLVLGKVYVIDTTTDTVKEFWEAG-----NQPTGLDVSPDNRYLVISDFLDHQIRVYRRDG 432 (433)
T ss_dssp CCSSCCEEEEEETTTTEEEEEEECS-----SSEEEEEECTTSCEEEEEETTTTEEEEEEETT
T ss_pred ccccceEEEEEECCCCcEEEEecCC-----CCCceEEEcCCCCEEEEEECCCCeEEEEEecC
Confidence 1344568999998778888877642 135666654 456887776678888888754
No 89
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.27 E-value=4.8e-09 Score=95.14 Aligned_cols=179 Identities=9% Similarity=0.103 Sum_probs=110.8
Q ss_pred CCceEEEeeCCCeEEEEEc-CCEEEEEEcCCCe---EEEEeecCCccccceEEcCCCC-EEEEe-CCCCeEEEc-CC-C-
Q 018705 53 HPEDVSVVVSKGALYTATR-DGWVKYFILHNET---LVNWKHIDSQSLLGLTTTKDGG-VILCD-NEKGLLKVT-EE-G- 123 (351)
Q Consensus 53 ~pe~i~~d~~~g~lyv~~~-~g~I~~~d~~~g~---~~~~~~~~~~p~~gl~~d~~G~-L~v~d-~~~gl~~~~-~~-g- 123 (351)
.|.++++++++..+|++.. ++.|..|+..+++ ..........+. +++++++|+ ||+++ ....+..++ .+ +
T Consensus 85 ~~~~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~-~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~ 163 (343)
T 1ri6_A 85 SLTHISTDHQGQFVFVGSYNAGNVSVTRLEDGLPVGVVDVVEGLDGCH-SANISPDNRTLWVPALKQDRICLFTVSDDGH 163 (343)
T ss_dssp CCSEEEECTTSSEEEEEETTTTEEEEEEEETTEEEEEEEEECCCTTBC-CCEECTTSSEEEEEEGGGTEEEEEEECTTSC
T ss_pred CCcEEEEcCCCCEEEEEecCCCeEEEEECCCCccccccccccCCCCce-EEEECCCCCEEEEecCCCCEEEEEEecCCCc
Confidence 7899999987777888775 7789999874333 222223334578 999999995 78887 334455555 33 6
Q ss_pred eEE-----ecCC-CCCcccEEEccCCc-EEEEeCCCccCCcccccccccccCCceEEEEeC--CCCeEEEee--c----C
Q 018705 124 VEA-----IVPD-ASFTNDVIAASDGT-LYFTVASTKYTPTDFYKDMAEGKPYGQLRKYDP--KLKETTVLH--E----G 188 (351)
Q Consensus 124 ~~~-----l~~~-~~~~n~l~~d~dG~-ly~t~~~~~~~~~~~~~~~~~~~~~g~l~~~d~--~~~~~~~~~--~----~ 188 (351)
... +... ...|++++++++|. +|+++.. .+.+..|+. .+++.+... . +
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~pdg~~l~~~~~~-----------------~~~i~~~~~~~~~g~~~~~~~~~~~~~~ 226 (343)
T 1ri6_A 164 LVAQDPAEVTTVEGAGPRHMVFHPNEQYAYCVNEL-----------------NSSVDVWELKDPHGNIECVQTLDMMPEN 226 (343)
T ss_dssp EEEEEEEEEECSTTCCEEEEEECTTSSEEEEEETT-----------------TTEEEEEESSCTTSCCEEEEEEECSCTT
T ss_pred eeeecccccccCCCCCcceEEECCCCCEEEEEeCC-----------------CCEEEEEEecCCCCcEEEEeeccccCcc
Confidence 432 2211 25788999999996 7887643 356777776 344432211 1 1
Q ss_pred ---ccccceEEEcCCCCEEEEEecce---eEEeecCCCCceeEEec-cCCCCCCceEECCCCC-EEEEE
Q 018705 189 ---FYFANGIALSKNEDFVVVCESWK---RYWLKGDRAGILDAFIE-NLPGGPDNINLAPDGS-FWIGL 249 (351)
Q Consensus 189 ---~~~~ngi~~~~dg~~lyv~~~~~---~~~i~~~~~~~~~~~~~-~~~g~pd~i~~d~~G~-lwva~ 249 (351)
...+.+++++|||+.||++.... .+|-.....+..+.... ...+.|.+++++++|+ ||++.
T Consensus 227 ~~~~~~~~~i~~s~dg~~l~v~~~~~~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~ 295 (343)
T 1ri6_A 227 FSDTRWAADIHITPDGRHLYACDRTASLITVFSVSEDGSVLSKEGFQPTETQPRGFNVDHSGKYLIAAG 295 (343)
T ss_dssp CCSCCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCCEEEEEEEECSSSCCCEEECTTSSEEEEEC
T ss_pred ccccCCccceEECCCCCEEEEEecCCCEEEEEEEcCCCCceEEeeeecCCCccceEEECCCCCEEEEec
Confidence 12455799999999899877533 23322111222222211 1223488999999998 66664
No 90
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=99.27 E-value=3.3e-09 Score=94.99 Aligned_cols=218 Identities=11% Similarity=0.111 Sum_probs=142.4
Q ss_pred CCCceEEEeeCCCeEEEEEcCCEEEEEEcCCCeEE-EEeecC-CccccceEEcCCCCEEEEeCC--CCeEEEcCCC--eE
Q 018705 52 NHPEDVSVVVSKGALYTATRDGWVKYFILHNETLV-NWKHID-SQSLLGLTTTKDGGVILCDNE--KGLLKVTEEG--VE 125 (351)
Q Consensus 52 ~~pe~i~~d~~~g~lyv~~~~g~I~~~d~~~g~~~-~~~~~~-~~p~~gl~~d~~G~L~v~d~~--~gl~~~~~~g--~~ 125 (351)
..+.+++++| +|++++ +.+++|+.+|+ +|+.. .+.... .... +..+.++|++++++.. ..++.++++| +.
T Consensus 37 ~~~~~~~~~p-dG~ilv-s~~~~V~~~d~-~G~~~W~~~~~~~~~~~-~~~~~~dG~~lv~~~~~~~~v~~vd~~Gk~l~ 112 (276)
T 3no2_A 37 WECNSVAATK-AGEILF-SYSKGAKMITR-DGRELWNIAAPAGCEMQ-TARILPDGNALVAWCGHPSTILEVNMKGEVLS 112 (276)
T ss_dssp CCCCEEEECT-TSCEEE-ECBSEEEEECT-TSCEEEEEECCTTCEEE-EEEECTTSCEEEEEESTTEEEEEECTTSCEEE
T ss_pred CCCcCeEECC-CCCEEE-eCCCCEEEECC-CCCEEEEEcCCCCcccc-ccEECCCCCEEEEecCCCCEEEEEeCCCCEEE
Confidence 3588999995 666777 55778999999 77653 332221 2455 7788899999998765 3577777877 33
Q ss_pred Eec--CC----CCCcccEEEccCCcEEEEeCCCccCCcccccccccccCCceEEEEeCCCCeEEEeecCccccceEEEcC
Q 018705 126 AIV--PD----ASFTNDVIAASDGTLYFTVASTKYTPTDFYKDMAEGKPYGQLRKYDPKLKETTVLHEGFYFANGIALSK 199 (351)
Q Consensus 126 ~l~--~~----~~~~n~l~~d~dG~ly~t~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~~~~~~~~~~~~~~ngi~~~~ 199 (351)
.+. .. ...+..++++++|++++++.. .++|+.||++ |+..........|.++.+.+
T Consensus 113 ~~~~~~~~~~~~~~~~~v~~~~~G~~lv~~~~-----------------~~~v~~~d~~-G~~~w~~~~~~~~~~~~~~~ 174 (276)
T 3no2_A 113 KTEFETGIERPHAQFRQINKNKKGNYLVPLFA-----------------TSEVREIAPN-GQLLNSVKLSGTPFSSAFLD 174 (276)
T ss_dssp EEEECCSCSSGGGSCSCCEECTTSCEEEEETT-----------------TTEEEEECTT-SCEEEEEECSSCCCEEEECT
T ss_pred EEeccCCCCcccccccCceECCCCCEEEEecC-----------------CCEEEEECCC-CCEEEEEECCCCccceeEcC
Confidence 332 11 145778899999999998865 5689999998 66544333335688899999
Q ss_pred CCCEEEEEecce-eEEeecCCCCcee-EEec-cCCC----CCCceEECCCCCEEEEEecCCchhhhhhhcChhHHHHHHh
Q 018705 200 NEDFVVVCESWK-RYWLKGDRAGILD-AFIE-NLPG----GPDNINLAPDGSFWIGLIKMNQTGVRAIQKCREKWELLDA 272 (351)
Q Consensus 200 dg~~lyv~~~~~-~~~i~~~~~~~~~-~~~~-~~~g----~pd~i~~d~~G~lwva~~~~~~~~~~~~~~~~~~~~~~~~ 272 (351)
+|+ +++++..+ ++..-++..|+.. .+.. ..++ .|.++...++|++||+...+....- .
T Consensus 175 ~g~-~~v~~~~~~~v~~~d~~tG~~~w~~~~~~~~~~~l~~~~~~~~~~~G~i~v~~~~g~~~~~-~------------- 239 (276)
T 3no2_A 175 NGD-CLVACGDAHCFVQLNLESNRIVRRVNANDIEGVQLFFVAQLFPLQNGGLYICNWQGHDREA-G------------- 239 (276)
T ss_dssp TSC-EEEECBTTSEEEEECTTTCCEEEEEEGGGSBSCCCSEEEEEEECTTSCEEEEEECTTCTTG-G-------------
T ss_pred CCC-EEEEeCCCCeEEEEeCcCCcEEEEecCCCCCCccccccccceEcCCCCEEEEeccCccccc-c-------------
Confidence 998 66666554 5544444434432 2221 1221 3677889999999999864311000 0
Q ss_pred ccchhhcccCCCCCCceEEEEEECCCCeEEEEEECCCCCcccceeEEEE
Q 018705 273 YPGLISLLLPMGSDAGARVVKVDGNDGKIIRDFNDPDATYISFVTSAAE 321 (351)
Q Consensus 273 ~~~~~~~~~~~~~~~~~~v~~~~~~~g~~~~~~~~~~g~~~~~~~~~~~ 321 (351)
....+.++++++ +|+++=.|..... +..+++++.
T Consensus 240 ------------~~~~~~~~~~~~-~g~~~W~~~~~~~--~~~~~~~~~ 273 (276)
T 3no2_A 240 ------------KGKHPQLVEIDS-EGKVVWQLNDKVK--FGMISTICP 273 (276)
T ss_dssp ------------GSCCCSEEEECT-TSBEEEEECCTTT--SCCCCEEEE
T ss_pred ------------ccCCceEEEECC-CCCEEEEecCccc--ccceeeeee
Confidence 002346899999 9999888865332 556777663
No 91
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.27 E-value=4e-09 Score=95.65 Aligned_cols=180 Identities=14% Similarity=0.202 Sum_probs=113.0
Q ss_pred CCCceEEEeeCCCeEEEEEcC-CEEEEEEcC--CCeEEEEe--ecCCccccceEEcCCCC-EEEEeCCCC-eEEEcC-CC
Q 018705 52 NHPEDVSVVVSKGALYTATRD-GWVKYFILH--NETLVNWK--HIDSQSLLGLTTTKDGG-VILCDNEKG-LLKVTE-EG 123 (351)
Q Consensus 52 ~~pe~i~~d~~~g~lyv~~~~-g~I~~~d~~--~g~~~~~~--~~~~~p~~gl~~d~~G~-L~v~d~~~g-l~~~~~-~g 123 (351)
..|.+++++|++..+|++..+ +.|..|+.. +++.+... .....|. +++++++|+ ||++....+ +..++. ++
T Consensus 38 ~~~~~~~~spdg~~l~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~s~dg~~l~~~~~~~~~i~~~d~~~~ 116 (343)
T 1ri6_A 38 GQVQPMVVSPDKRYLYVGVRPEFRVLAYRIAPDDGALTFAAESALPGSLT-HISTDHQGQFVFVGSYNAGNVSVTRLEDG 116 (343)
T ss_dssp SCCCCEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEECSSCCS-EEEECTTSSEEEEEETTTTEEEEEEEETT
T ss_pred CCCceEEECCCCCEEEEeecCCCeEEEEEecCCCCceeeccccccCCCCc-EEEEcCCCCEEEEEecCCCeEEEEECCCC
Confidence 568999999877789988876 889888765 56654332 2234788 999999997 778876555 444442 33
Q ss_pred --eEEe--cCCCCCcccEEEccCCc-EEEEeCCCccCCcccccccccccCCceEEEEeCCC-CeEEEee------cCccc
Q 018705 124 --VEAI--VPDASFTNDVIAASDGT-LYFTVASTKYTPTDFYKDMAEGKPYGQLRKYDPKL-KETTVLH------EGFYF 191 (351)
Q Consensus 124 --~~~l--~~~~~~~n~l~~d~dG~-ly~t~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~-~~~~~~~------~~~~~ 191 (351)
.+.. ......+.+++++++|+ +|+++.. .+.|..||..+ ++..... .....
T Consensus 117 ~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~-----------------~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~ 179 (343)
T 1ri6_A 117 LPVGVVDVVEGLDGCHSANISPDNRTLWVPALK-----------------QDRICLFTVSDDGHLVAQDPAEVTTVEGAG 179 (343)
T ss_dssp EEEEEEEEECCCTTBCCCEECTTSSEEEEEEGG-----------------GTEEEEEEECTTSCEEEEEEEEEECSTTCC
T ss_pred ccccccccccCCCCceEEEECCCCCEEEEecCC-----------------CCEEEEEEecCCCceeeecccccccCCCCC
Confidence 1211 12225689999999995 7777633 35788888765 5553221 22346
Q ss_pred cceEEEcCCCCEEEEEecce-e--EEeecCCCCceeEE--eccCC------CCCCceEECCCCC-EEEEE
Q 018705 192 ANGIALSKNEDFVVVCESWK-R--YWLKGDRAGILDAF--IENLP------GGPDNINLAPDGS-FWIGL 249 (351)
Q Consensus 192 ~ngi~~~~dg~~lyv~~~~~-~--~~i~~~~~~~~~~~--~~~~~------g~pd~i~~d~~G~-lwva~ 249 (351)
|.+++++|+++.+|++.... . +|-.+...++.+.. ....+ ..+..++++++|+ ||++.
T Consensus 180 ~~~~~~~pdg~~l~~~~~~~~~i~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~s~dg~~l~v~~ 249 (343)
T 1ri6_A 180 PRHMVFHPNEQYAYCVNELNSSVDVWELKDPHGNIECVQTLDMMPENFSDTRWAADIHITPDGRHLYACD 249 (343)
T ss_dssp EEEEEECTTSSEEEEEETTTTEEEEEESSCTTSCCEEEEEEECSCTTCCSCCCEEEEEECTTSSEEEEEE
T ss_pred cceEEECCCCCEEEEEeCCCCEEEEEEecCCCCcEEEEeeccccCccccccCCccceEECCCCCEEEEEe
Confidence 88999999999898887433 3 33221122332211 11111 1233589999996 66664
No 92
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=99.26 E-value=1.1e-09 Score=97.25 Aligned_cols=186 Identities=16% Similarity=0.101 Sum_probs=123.1
Q ss_pred ccCceEecCCCcCCCceEEEeeCCCeEEEEEc---CCEEEEEEcCCCeEEEEeecCC--ccccceEEcCCCCEEEEeCCC
Q 018705 40 MKGLTKLGEGCVNHPEDVSVVVSKGALYTATR---DGWVKYFILHNETLVNWKHIDS--QSLLGLTTTKDGGVILCDNEK 114 (351)
Q Consensus 40 l~~~~~i~~~~~~~pe~i~~d~~~g~lyv~~~---~g~I~~~d~~~g~~~~~~~~~~--~p~~gl~~d~~G~L~v~d~~~ 114 (351)
...++.++.+....|.++++++ ++.||+++. ++.|.++|..++++..-..... .+. |++++ .++||+++...
T Consensus 9 ~~vv~~~p~~~~~f~~Gl~~~~-dg~Lyvstg~~~~s~v~~iD~~tg~v~~~i~l~~~~fge-Gi~~~-g~~lyv~t~~~ 85 (266)
T 2iwa_A 9 VEVLNEFPHDPYAFTQGLVYAE-NDTLFESTGLYGRSSVRQVALQTGKVENIHKMDDSYFGE-GLTLL-NEKLYQVVWLK 85 (266)
T ss_dssp EEEEEEEECCTTCCEEEEEECS-TTEEEEEECSTTTCEEEEEETTTCCEEEEEECCTTCCEE-EEEEE-TTEEEEEETTC
T ss_pred ceEEEEEECCCCCCcccEEEeC-CCeEEEECCCCCCCEEEEEECCCCCEEEEEecCCCcceE-EEEEe-CCEEEEEEecC
Confidence 4455667776555689999994 489999875 5789999999998765433333 345 67776 45899999876
Q ss_pred C-eEEEcC-CC--eEEecCCCCCcccEEEccCC-cEEEEeCCCccCCcccccccccccCCceEEEEeCCCCeEEEeec--
Q 018705 115 G-LLKVTE-EG--VEAIVPDASFTNDVIAASDG-TLYFTVASTKYTPTDFYKDMAEGKPYGQLRKYDPKLKETTVLHE-- 187 (351)
Q Consensus 115 g-l~~~~~-~g--~~~l~~~~~~~n~l~~d~dG-~ly~t~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~~~~~~~~~-- 187 (351)
+ +..++. +. +..+..+ .+.+..+.+|| ++|+++.+ +.|+.+|+++.+......
T Consensus 86 ~~v~viD~~t~~v~~~i~~g--~~~g~glt~Dg~~l~vs~gs------------------~~l~viD~~t~~v~~~I~Vg 145 (266)
T 2iwa_A 86 NIGFIYDRRTLSNIKNFTHQ--MKDGWGLATDGKILYGSDGT------------------SILYEIDPHTFKLIKKHNVK 145 (266)
T ss_dssp SEEEEEETTTTEEEEEEECC--SSSCCEEEECSSSEEEECSS------------------SEEEEECTTTCCEEEEEECE
T ss_pred CEEEEEECCCCcEEEEEECC--CCCeEEEEECCCEEEEECCC------------------CeEEEEECCCCcEEEEEEEC
Confidence 4 566664 55 4444332 35666677776 79998843 689999999866543221
Q ss_pred ----CccccceEEEcCCCCEEEEEecce-eEEeecCCCCceeEEec--cC---------C--CCCCceEECCCC-CEEEE
Q 018705 188 ----GFYFANGIALSKNEDFVVVCESWK-RYWLKGDRAGILDAFIE--NL---------P--GGPDNINLAPDG-SFWIG 248 (351)
Q Consensus 188 ----~~~~~ngi~~~~dg~~lyv~~~~~-~~~i~~~~~~~~~~~~~--~~---------~--g~pd~i~~d~~G-~lwva 248 (351)
....+|++.+. +| .+|++.... .+.+-+...+++.-.++ ++ + ..|.||++|++| ++||+
T Consensus 146 ~~~~p~~~~nele~~-dg-~lyvn~~~~~~V~vID~~tg~V~~~I~~~g~~~~~~~~~~~~~~v~nGIa~~~~~~~lfVT 223 (266)
T 2iwa_A 146 YNGHRVIRLNELEYI-NG-EVWANIWQTDCIARISAKDGTLLGWILLPNLRKKLIDEGFRDIDVLNGIAWDQENKRIFVT 223 (266)
T ss_dssp ETTEECCCEEEEEEE-TT-EEEEEETTSSEEEEEETTTCCEEEEEECHHHHHHHHHTTCTTCCCEEEEEEETTTTEEEEE
T ss_pred CCCcccccceeEEEE-CC-EEEEecCCCCeEEEEECCCCcEEEEEECCCcccccccccccccCceEEEEEcCCCCEEEEE
Confidence 12368999988 66 599987544 44444444444322221 11 0 246899999988 59998
Q ss_pred Ee
Q 018705 249 LI 250 (351)
Q Consensus 249 ~~ 250 (351)
..
T Consensus 224 gk 225 (266)
T 2iwa_A 224 GK 225 (266)
T ss_dssp ET
T ss_pred CC
Confidence 64
No 93
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=99.24 E-value=5.8e-09 Score=102.40 Aligned_cols=235 Identities=13% Similarity=0.135 Sum_probs=148.8
Q ss_pred CCceEEEeeCCCeEEEEEcCCEEEEEEc--CCCeEEEEeecCCccccceEEcC----CCC-EEEEeCCCC-eEEEcC-CC
Q 018705 53 HPEDVSVVVSKGALYTATRDGWVKYFIL--HNETLVNWKHIDSQSLLGLTTTK----DGG-VILCDNEKG-LLKVTE-EG 123 (351)
Q Consensus 53 ~pe~i~~d~~~g~lyv~~~~g~I~~~d~--~~g~~~~~~~~~~~p~~gl~~d~----~G~-L~v~d~~~g-l~~~~~-~g 123 (351)
.|.+++++|++..+|++..++.|..||. .+++...-...+..|. ++++++ +|+ ||+++...+ +..++. ++
T Consensus 180 ~~~~v~~spdg~~l~v~~~d~~V~v~D~~~~t~~~~~~i~~g~~p~-~va~sp~~~~dg~~l~v~~~~~~~v~v~D~~t~ 258 (543)
T 1nir_A 180 AVHISRMSASGRYLLVIGRDARIDMIDLWAKEPTKVAEIKIGIEAR-SVESSKFKGYEDRYTIAGAYWPPQFAIMDGETL 258 (543)
T ss_dssp TEEEEEECTTSCEEEEEETTSEEEEEETTSSSCEEEEEEECCSEEE-EEEECCSTTCTTTEEEEEEEESSEEEEEETTTC
T ss_pred ccceEEECCCCCEEEEECCCCeEEEEECcCCCCcEEEEEecCCCcc-eEEeCCCcCCCCCEEEEEEccCCeEEEEecccc
Confidence 3789999988889999999999999999 6776543334566788 999999 985 788775444 444443 44
Q ss_pred --eEEecCC-----------CCCcccEEEccCC-cEEEEeCCCccCCcccccccccccCCceEEEEeCCCCeE-E-Eeec
Q 018705 124 --VEAIVPD-----------ASFTNDVIAASDG-TLYFTVASTKYTPTDFYKDMAEGKPYGQLRKYDPKLKET-T-VLHE 187 (351)
Q Consensus 124 --~~~l~~~-----------~~~~n~l~~d~dG-~ly~t~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~~~~-~-~~~~ 187 (351)
++.+... ...+.++++++++ .+|++... .+.|+.+|.++++. . ....
T Consensus 259 ~~~~~i~~~g~~~~~~~~~~~~~v~~i~~s~~~~~~~vs~~~-----------------~g~i~vvd~~~~~~l~~~~i~ 321 (543)
T 1nir_A 259 EPKQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIVNVKE-----------------TGKVLLVNYKDIDNLTVTSIG 321 (543)
T ss_dssp CEEEEEECCEECSSSCCEESCCCEEEEEECSSSSEEEEEETT-----------------TTEEEEEECTTSSSCEEEEEE
T ss_pred ccceeecccCcccCccccccCCceEEEEECCCCCEEEEEECC-----------------CCeEEEEEecCCCcceeEEec
Confidence 4444321 1256789999977 46666543 57899998765432 1 1123
Q ss_pred CccccceEEEcCCCCEEEEEecce-eEEeecCCCCceeEEec-c-CCCCC-CceE-ECCC-CCEEEEEecCCchhhhhhh
Q 018705 188 GFYFANGIALSKNEDFVVVCESWK-RYWLKGDRAGILDAFIE-N-LPGGP-DNIN-LAPD-GSFWIGLIKMNQTGVRAIQ 261 (351)
Q Consensus 188 ~~~~~ngi~~~~dg~~lyv~~~~~-~~~i~~~~~~~~~~~~~-~-~~g~p-d~i~-~d~~-G~lwva~~~~~~~~~~~~~ 261 (351)
...+|.+++++|||+++|++.... .+.+-+...++.....+ . .| .| .+.. .+++ |.+|++....
T Consensus 322 ~~~~~~~~~~spdg~~l~va~~~~~~v~v~D~~tg~l~~~i~~g~~p-h~g~g~~~~~p~~g~~~~s~~~~--------- 391 (543)
T 1nir_A 322 AAPFLHDGGWDSSHRYFMTAANNSNKVAVIDSKDRRLSALVDVGKTP-HPGRGANFVHPKYGPVWSTSHLG--------- 391 (543)
T ss_dssp CCSSCCCEEECTTSCEEEEEEGGGTEEEEEETTTTEEEEEEECSSSB-CCTTCEEEEETTTEEEEEEEBSS---------
T ss_pred cCcCccCceECCCCCEEEEEecCCCeEEEEECCCCeEEEeeccCCCC-CCCCCcccCCCCCccEEEeccCC---------
Confidence 356799999999999888876543 33333333344322221 1 11 12 2443 3565 7789876421
Q ss_pred cChhHHHHHHhccchhhcccCCCCCCceEEEEEECCC-------CeEEEEEECCCCCcccceeEEEE--ECCEEEEEecC
Q 018705 262 KCREKWELLDAYPGLISLLLPMGSDAGARVVKVDGND-------GKIIRDFNDPDATYISFVTSAAE--FDGNLYLASLQ 332 (351)
Q Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-------g~~~~~~~~~~g~~~~~~~~~~~--~~g~L~ig~~~ 332 (351)
.+.|..+|..+ ++.+..+..+.+. ...+.. ++..||+++..
T Consensus 392 --------------------------d~~V~v~d~~~~~~~~~~~~~v~~l~~~g~~----~~~v~~~pdg~~l~v~~~~ 441 (543)
T 1nir_A 392 --------------------------DGSISLIGTDPKNHPQYAWKKVAELQGQGGG----SLFIKTHPKSSHLYVDTTF 441 (543)
T ss_dssp --------------------------SSEEEEEECCTTTCTTTBTSEEEEEECSCSC----CCCEECCTTCCEEEECCTT
T ss_pred --------------------------CceEEEEEeCCCCCchhcCeEEEEEEcCCCC----ceEEEcCCCCCcEEEecCC
Confidence 12456666533 6888888764332 222333 45789998732
Q ss_pred ------CCeEEEEeCCCCC
Q 018705 333 ------SNFIGILPLDGPE 345 (351)
Q Consensus 333 ------~~~i~~~~~~~~~ 345 (351)
...|.++++.+.+
T Consensus 442 ~~~~~~~~~v~v~d~~~~~ 460 (543)
T 1nir_A 442 NPDARISQSVAVFDLKNLD 460 (543)
T ss_dssp CSSHHHHTCEEEEETTCTT
T ss_pred CCCcccCceEEEEECCCCC
Confidence 3489999988765
No 94
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=99.23 E-value=6e-08 Score=88.35 Aligned_cols=233 Identities=14% Similarity=0.124 Sum_probs=151.1
Q ss_pred CCcCCCceEEEeeCCCeEEEEEcCCEEEEEEcCCCeEE-EEeecCCccccceEEcCCCCEEEEeCCCCeEEEc--CCC--
Q 018705 49 GCVNHPEDVSVVVSKGALYTATRDGWVKYFILHNETLV-NWKHIDSQSLLGLTTTKDGGVILCDNEKGLLKVT--EEG-- 123 (351)
Q Consensus 49 ~~~~~pe~i~~d~~~g~lyv~~~~g~I~~~d~~~g~~~-~~~~~~~~p~~gl~~d~~G~L~v~d~~~gl~~~~--~~g-- 123 (351)
+.-..-.++++.+.+..+.++..|+.|..||..+++.. .+........ .+++.++|+.+++....+.+++. .++
T Consensus 78 gh~~~v~~~~~~~~~~~l~s~s~D~~i~lWd~~~~~~~~~~~~~~~~~~-~~~~spdg~~l~~g~~dg~v~i~~~~~~~~ 156 (321)
T 3ow8_A 78 GHQLGVVSVDISHTLPIAASSSLDAHIRLWDLENGKQIKSIDAGPVDAW-TLAFSPDSQYLATGTHVGKVNIFGVESGKK 156 (321)
T ss_dssp CCSSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEECCTTCCC-CEEECTTSSEEEEECTTSEEEEEETTTCSE
T ss_pred cCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCCEEEEEeCCCccEE-EEEECCCCCEEEEEcCCCcEEEEEcCCCce
Confidence 33344567888866677888999999999999887653 3333334556 89999999887776666666665 344
Q ss_pred eEEecCCCCCcccEEEccCCcEEEEeCCCccCCcccccccccccCCceEEEEeCCCCeEEEeecC-ccccceEEEcCCCC
Q 018705 124 VEAIVPDASFTNDVIAASDGTLYFTVASTKYTPTDFYKDMAEGKPYGQLRKYDPKLKETTVLHEG-FYFANGIALSKNED 202 (351)
Q Consensus 124 ~~~l~~~~~~~n~l~~d~dG~ly~t~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~~~~~~~~~~-~~~~ngi~~~~dg~ 202 (351)
...+......+.+++++|+|.+.++.+. +|.|..||..+++......+ ....+.++++|+++
T Consensus 157 ~~~~~~~~~~v~~~~~spdg~~lasg~~-----------------dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~spd~~ 219 (321)
T 3ow8_A 157 EYSLDTRGKFILSIAYSPDGKYLASGAI-----------------DGIINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQ 219 (321)
T ss_dssp EEEEECSSSCEEEEEECTTSSEEEEEET-----------------TSCEEEEETTTTEEEEEECCCSSCCCEEEECTTSC
T ss_pred eEEecCCCceEEEEEECCCCCEEEEEcC-----------------CCeEEEEECCCCcEEEEEcccCCceeEEEEcCCCC
Confidence 3334333356888999999987776543 46799999888776443333 33467899999999
Q ss_pred EEEEEecce--eEEeecCCCCce-eEEeccCCCCCCceEECCCCCEEEEEecCCchhhhhhhcChhHHHHHHhccchhhc
Q 018705 203 FVVVCESWK--RYWLKGDRAGIL-DAFIENLPGGPDNINLAPDGSFWIGLIKMNQTGVRAIQKCREKWELLDAYPGLISL 279 (351)
Q Consensus 203 ~lyv~~~~~--~~~i~~~~~~~~-~~~~~~~~g~pd~i~~d~~G~lwva~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 279 (351)
.|..+..++ ++|-. ..+.. ..+. ...+....+++.++|.+.++...
T Consensus 220 ~l~s~s~dg~i~iwd~--~~~~~~~~~~-~h~~~v~~~~~sp~~~~l~s~s~---------------------------- 268 (321)
T 3ow8_A 220 LLVTASDDGYIKIYDV--QHANLAGTLS-GHASWVLNVAFCPDDTHFVSSSS---------------------------- 268 (321)
T ss_dssp EEEEECTTSCEEEEET--TTCCEEEEEC-CCSSCEEEEEECTTSSEEEEEET----------------------------
T ss_pred EEEEEcCCCeEEEEEC--CCcceeEEEc-CCCCceEEEEECCCCCEEEEEeC----------------------------
Confidence 776666665 55522 12222 2222 22233456789999987776543
Q ss_pred ccCCCCCCceEEEEEECCCCeEEEEEECCCCCcccceeEEEEE-CCEEEEEecCCCeEEEEeCC
Q 018705 280 LLPMGSDAGARVVKVDGNDGKIIRDFNDPDATYISFVTSAAEF-DGNLYLASLQSNFIGILPLD 342 (351)
Q Consensus 280 ~~~~~~~~~~~v~~~~~~~g~~~~~~~~~~g~~~~~~~~~~~~-~g~L~ig~~~~~~i~~~~~~ 342 (351)
.+.|..+|..+++.+..+..+.+ .+.++... ++...++....+.|..++.|
T Consensus 269 --------D~~v~iwd~~~~~~~~~~~~h~~----~v~~v~~s~~g~~l~s~~~d~~i~vwd~p 320 (321)
T 3ow8_A 269 --------DKSVKVWDVGTRTCVHTFFDHQD----QVWGVKYNGNGSKIVSVGDDQEIHIYDCP 320 (321)
T ss_dssp --------TSCEEEEETTTTEEEEEECCCSS----CEEEEEECTTSSEEEEEETTCCEEEEECC
T ss_pred --------CCcEEEEeCCCCEEEEEEcCCCC----cEEEEEECCCCCEEEEEeCCCeEEEEeCC
Confidence 13466778757788877765443 46677664 34444444446667777754
No 95
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=99.22 E-value=7.2e-08 Score=86.81 Aligned_cols=240 Identities=12% Similarity=0.161 Sum_probs=150.3
Q ss_pred CCcCCCceEEEeeCCCeEEEEEcCCEEEEEEcCCCeEEEE-eecCCccccceEEcCCCCEEEEeCCCCeEEEc--CCC--
Q 018705 49 GCVNHPEDVSVVVSKGALYTATRDGWVKYFILHNETLVNW-KHIDSQSLLGLTTTKDGGVILCDNEKGLLKVT--EEG-- 123 (351)
Q Consensus 49 ~~~~~pe~i~~d~~~g~lyv~~~~g~I~~~d~~~g~~~~~-~~~~~~p~~gl~~d~~G~L~v~d~~~gl~~~~--~~g-- 123 (351)
+.-..-.+++++|++..+.++..+|.|..|+..+++.... ........ .++++++|+++++....+.+++. .++
T Consensus 21 gh~~~v~~~~~s~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~h~~~v~-~~~~~~~~~~l~s~~~d~~i~vwd~~~~~~ 99 (312)
T 4ery_A 21 GHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGIS-DVAWSSDSNLLVSASDDKTLKIWDVSSGKC 99 (312)
T ss_dssp CCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEE-EEEECTTSSEEEEEETTSEEEEEETTTCCE
T ss_pred ccCCcEEEEEECCCCCEEEEeeCCCeEEEEeCCCcccchhhccCCCceE-EEEEcCCCCEEEEECCCCEEEEEECCCCcE
Confidence 4334557899998777888999999999999877766443 22334456 89999999877766566766666 344
Q ss_pred eEEecCCCCCcccEEEccCCcEEEEeCCCccCCcccccccccccCCceEEEEeCCCCeEEEee-cCccccceEEEcCCCC
Q 018705 124 VEAIVPDASFTNDVIAASDGTLYFTVASTKYTPTDFYKDMAEGKPYGQLRKYDPKLKETTVLH-EGFYFANGIALSKNED 202 (351)
Q Consensus 124 ~~~l~~~~~~~n~l~~d~dG~ly~t~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~~~~~~~~-~~~~~~ngi~~~~dg~ 202 (351)
...+......+..+++.+++.+.++.+. ++.|..||..+++..... ........++++++++
T Consensus 100 ~~~~~~~~~~v~~~~~~~~~~~l~s~~~-----------------d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~ 162 (312)
T 4ery_A 100 LKTLKGHSNYVFCCNFNPQSNLIVSGSF-----------------DESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGS 162 (312)
T ss_dssp EEEEECCSSCEEEEEECSSSSEEEEEET-----------------TSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSS
T ss_pred EEEEcCCCCCEEEEEEcCCCCEEEEEeC-----------------CCcEEEEECCCCEEEEEecCCCCcEEEEEEcCCCC
Confidence 4555444467888999999987777654 467999998776653333 2233457899999999
Q ss_pred EEEEEecce--eEEeecCCCCc-eeEEeccCCCCCCceEECCCCCEEEEEecCCchhhhhhhcChhHHHHHHhccchhhc
Q 018705 203 FVVVCESWK--RYWLKGDRAGI-LDAFIENLPGGPDNINLAPDGSFWIGLIKMNQTGVRAIQKCREKWELLDAYPGLISL 279 (351)
Q Consensus 203 ~lyv~~~~~--~~~i~~~~~~~-~~~~~~~~~g~pd~i~~d~~G~lwva~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 279 (351)
.++.+..++ ++| +...++ ...+..........++++++|++.++...
T Consensus 163 ~l~~~~~d~~i~~w--d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~---------------------------- 212 (312)
T 4ery_A 163 LIVSSSYDGLCRIW--DTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATL---------------------------- 212 (312)
T ss_dssp EEEEEETTSCEEEE--ETTTCCEEEEECCSSCCCEEEEEECTTSSEEEEEET----------------------------
T ss_pred EEEEEeCCCcEEEE--ECCCCceeeEEeccCCCceEEEEECCCCCEEEEEcC----------------------------
Confidence 777776666 444 222222 22222111111234688999987666443
Q ss_pred ccCCCCCCceEEEEEECCCCeEEEEEECCCCCcccceeEEEEECCEEEEEecCCCeEEEEeCCCC
Q 018705 280 LLPMGSDAGARVVKVDGNDGKIIRDFNDPDATYISFVTSAAEFDGNLYLASLQSNFIGILPLDGP 344 (351)
Q Consensus 280 ~~~~~~~~~~~v~~~~~~~g~~~~~~~~~~g~~~~~~~~~~~~~g~L~ig~~~~~~i~~~~~~~~ 344 (351)
.+.|..+|..+++.+..+..+..............++.+.++....+.|..+++.+.
T Consensus 213 --------d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~vwd~~~~ 269 (312)
T 4ery_A 213 --------DNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTK 269 (312)
T ss_dssp --------TTEEEEEETTTTEEEEEECSSCCSSSCCCEEEECSSSCEEEECCTTSCEEEEETTTC
T ss_pred --------CCeEEEEECCCCcEEEEEEecCCceEEEEEEEEeCCCcEEEEECCCCEEEEEECCCc
Confidence 135677787677777777654432221112222234554444444667777777654
No 96
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.22 E-value=8.1e-09 Score=95.20 Aligned_cols=231 Identities=19% Similarity=0.232 Sum_probs=135.9
Q ss_pred cCCCceEEEeeCCCeEEEEEcC----CEE--EEEEcCCCeEEEEee---cCCccccceEEcCCC-CEEEEeCCCCeEEE-
Q 018705 51 VNHPEDVSVVVSKGALYTATRD----GWV--KYFILHNETLVNWKH---IDSQSLLGLTTTKDG-GVILCDNEKGLLKV- 119 (351)
Q Consensus 51 ~~~pe~i~~d~~~g~lyv~~~~----g~I--~~~d~~~g~~~~~~~---~~~~p~~gl~~d~~G-~L~v~d~~~gl~~~- 119 (351)
...|..++++|++..+|++..+ +.| +.++..+|+.+.+.. ....|. .+++ +| .||+++...+.+.+
T Consensus 49 ~~~p~~l~~spdg~~l~~~~~~~~~~~~v~~~~~~~~~g~~~~~~~~~~~~~~p~-~~~~--dg~~l~~~~~~~~~v~~~ 125 (361)
T 3scy_A 49 VANPSYLIPSADGKFVYSVNEFSKDQAAVSAFAFDKEKGTLHLLNTQKTMGADPC-YLTT--NGKNIVTANYSGGSITVF 125 (361)
T ss_dssp CSCCCSEEECTTSSEEEEEECCSSTTCEEEEEEEETTTTEEEEEEEEECSSSCEE-EEEE--CSSEEEEEETTTTEEEEE
T ss_pred CCCCceEEECCCCCEEEEEEccCCCCCcEEEEEEeCCCCcEEEeeEeccCCCCcE-EEEE--CCCEEEEEECCCCEEEEE
Confidence 5689999999877789998774 677 455665577655432 345688 8888 55 58888866554333
Q ss_pred c--CCC-eEEe----c-CC---------CCCcccEEEccCCc-EEEEeCCCccCCcccccccccccCCceEEEE--eCCC
Q 018705 120 T--EEG-VEAI----V-PD---------ASFTNDVIAASDGT-LYFTVASTKYTPTDFYKDMAEGKPYGQLRKY--DPKL 179 (351)
Q Consensus 120 ~--~~g-~~~l----~-~~---------~~~~n~l~~d~dG~-ly~t~~~~~~~~~~~~~~~~~~~~~g~l~~~--d~~~ 179 (351)
+ .++ ...+ . .. ...+.+++++|||+ +|+++.. .+.+..| +..+
T Consensus 126 ~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~-----------------~~~v~v~~~~~~~ 188 (361)
T 3scy_A 126 PIGQDGALLPASDVIEFKGSGPDKERQTMPHLHCVRITPDGKYLLADDLG-----------------TDQIHKFNINPNA 188 (361)
T ss_dssp EBCTTSCBCSCSEEEECCCCCSCTTTCSSCCEEEEEECTTSSEEEEEETT-----------------TTEEEEEEECTTC
T ss_pred EeCCCCcCcccceeEEccCCCCCccccCCCcceEEEECCCCCEEEEEeCC-----------------CCEEEEEEEcCCC
Confidence 3 234 2211 1 11 02347799999996 8888754 3455555 5544
Q ss_pred C----e-E-------EEeecCccccceEEEcCCCCEEEEEecc-e---eEEeecCCCCceeEEec--cCC---CCCCceE
Q 018705 180 K----E-T-------TVLHEGFYFANGIALSKNEDFVVVCESW-K---RYWLKGDRAGILDAFIE--NLP---GGPDNIN 238 (351)
Q Consensus 180 ~----~-~-------~~~~~~~~~~ngi~~~~dg~~lyv~~~~-~---~~~i~~~~~~~~~~~~~--~~~---g~pd~i~ 238 (351)
+ + + .........|.+++++|||+++|++... + .+.+. .++.+.... ..+ ..|.+++
T Consensus 189 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~~~~---~g~~~~~~~~~~~~~~~~~~~~i~ 265 (361)
T 3scy_A 189 NADNKEKFLTKGTPEAFKVAPGSGPRHLIFNSDGKFAYLINEIGGTVIAFRYA---DGMLDEIQTVAADTVNAQGSGDIH 265 (361)
T ss_dssp CTTTCCCCEEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTCEEEEEEEE---TTEEEEEEEEESCSSCCCCEEEEE
T ss_pred CcccccceeecccccceecCCCCCCeEEEEcCCCCEEEEEcCCCCeEEEEEec---CCceEEeEEEecCCCCCCCcccEE
Confidence 3 2 2 1122334578899999999999998743 3 23333 233222111 111 1245789
Q ss_pred ECCCCC-EEEEEecCCchhhhhhhcChhHHHHHHhccchhhcccCCCCCCceEEEEEECCCCeE--EEEEECCCCCcccc
Q 018705 239 LAPDGS-FWIGLIKMNQTGVRAIQKCREKWELLDAYPGLISLLLPMGSDAGARVVKVDGNDGKI--IRDFNDPDATYISF 315 (351)
Q Consensus 239 ~d~~G~-lwva~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~g~~--~~~~~~~~g~~~~~ 315 (351)
++++|+ ||++.... ...-.++.+++++|+. +..+.. +. .
T Consensus 266 ~spdg~~l~v~~~~~---------------------------------~~~i~v~~~~~~~g~~~~~~~~~~--g~---~ 307 (361)
T 3scy_A 266 LSPDGKYLYASNRLK---------------------------------ADGVAIFKVDETNGTLTKVGYQLT--GI---H 307 (361)
T ss_dssp ECTTSSEEEEEECSS---------------------------------SCEEEEEEECTTTCCEEEEEEEEC--SS---C
T ss_pred ECCCCCEEEEECCCC---------------------------------CCEEEEEEEcCCCCcEEEeeEecC--CC---C
Confidence 999998 66664320 0112355566435653 333432 21 3
Q ss_pred eeEEEEE--CCEEEEEecCCCeEEEEeCC
Q 018705 316 VTSAAEF--DGNLYLASLQSNFIGILPLD 342 (351)
Q Consensus 316 ~~~~~~~--~g~L~ig~~~~~~i~~~~~~ 342 (351)
+..+... +..||+++...+.+.++++.
T Consensus 308 ~~~~~~spdg~~l~~~~~~~~~v~v~~~d 336 (361)
T 3scy_A 308 PRNFIITPNGKYLLVACRDTNVIQIFERD 336 (361)
T ss_dssp CCEEEECTTSCEEEEEETTTTEEEEEEEC
T ss_pred CceEEECCCCCEEEEEECCCCCEEEEEEE
Confidence 4455543 45699998777888886544
No 97
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.22 E-value=7.6e-09 Score=93.56 Aligned_cols=213 Identities=15% Similarity=0.059 Sum_probs=132.0
Q ss_pred CCceEEEeeCCCeEEEEE------------cCCEEEEEEcCCCeEEEEeecCCccccceEEcCCCC-EEEEeCCCCeEEE
Q 018705 53 HPEDVSVVVSKGALYTAT------------RDGWVKYFILHNETLVNWKHIDSQSLLGLTTTKDGG-VILCDNEKGLLKV 119 (351)
Q Consensus 53 ~pe~i~~d~~~g~lyv~~------------~~g~I~~~d~~~g~~~~~~~~~~~p~~gl~~d~~G~-L~v~d~~~gl~~~ 119 (351)
.|.+++++++++.+|++. .++.|+.+|..+++..........|. +++++++|+ ||+++ +.++.+
T Consensus 83 ~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~~~~~~~-~~~~s~dg~~l~~~~--~~i~~~ 159 (337)
T 1pby_B 83 SLFGAALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAETLSRRKAFEAPRQIT-MLAWARDGSKLYGLG--RDLHVM 159 (337)
T ss_dssp CTTCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEETTTTEEEEEEECCSSCC-CEEECTTSSCEEEES--SSEEEE
T ss_pred cccceEECCCCCEEEEEecccccccccccccCceEEEEECCCCcEEEEEeCCCCcc-eeEECCCCCEEEEeC--CeEEEE
Confidence 688999997777899886 56899999998887654444456788 999999996 78873 467777
Q ss_pred cC-CC--eEEecCCCCCcccEEEccCCc-EEEEeCCCccCCcccccccccc------cCCceEEEEeCCCCeEEEee--c
Q 018705 120 TE-EG--VEAIVPDASFTNDVIAASDGT-LYFTVASTKYTPTDFYKDMAEG------KPYGQLRKYDPKLKETTVLH--E 187 (351)
Q Consensus 120 ~~-~g--~~~l~~~~~~~n~l~~d~dG~-ly~t~~~~~~~~~~~~~~~~~~------~~~g~l~~~d~~~~~~~~~~--~ 187 (351)
+. ++ ...+... ..+..+++++||. +|++......-...+......+ .....|+.+|.++++..... .
T Consensus 160 d~~~~~~~~~~~~~-~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~ 238 (337)
T 1pby_B 160 DPEAGTLVEDKPIQ-SWEAETYAQPDVLAVWNQHESSGVMATPFYTARKDIDPADPTAYRTGLLTMDLETGEMAMREVRI 238 (337)
T ss_dssp ETTTTEEEEEECST-TTTTTTBCCCBCCCCCCCCTTTTEEEEEEEEEBTTSCTTSGGGEEEEEEEEETTTCCEEEEEEEE
T ss_pred ECCCCcEeeeeecc-ccCCCceeCCCccEEeeeccCCCceeeeeeccccccccccccccccceEEEeCCCCCceEeecCC
Confidence 74 55 3333322 2233446788874 6665432110000000000000 11126899999988765221 2
Q ss_pred CccccceEEEcCCCCEEEEEecceeEEeecCCCCceeEEeccCCCCCCceEECCCCC-EEEEEecCCchhhhhhhcChhH
Q 018705 188 GFYFANGIALSKNEDFVVVCESWKRYWLKGDRAGILDAFIENLPGGPDNINLAPDGS-FWIGLIKMNQTGVRAIQKCREK 266 (351)
Q Consensus 188 ~~~~~ngi~~~~dg~~lyv~~~~~~~~i~~~~~~~~~~~~~~~~g~pd~i~~d~~G~-lwva~~~~~~~~~~~~~~~~~~ 266 (351)
....++++++++||+.+|+++ +.+.+-+...++..... ..+..|.+++++++|+ +|++..
T Consensus 239 ~~~~~~~~~~s~dg~~l~~~~--~~v~~~d~~~~~~~~~~-~~~~~~~~~~~s~dg~~l~~~~~---------------- 299 (337)
T 1pby_B 239 MDVFYFSTAVNPAKTRAFGAY--NVLESFDLEKNASIKRV-PLPHSYYSVNVSTDGSTVWLGGA---------------- 299 (337)
T ss_dssp CSSCEEEEEECTTSSEEEEEE--SEEEEEETTTTEEEEEE-ECSSCCCEEEECTTSCEEEEESB----------------
T ss_pred CCCceeeEEECCCCCEEEEeC--CeEEEEECCCCcCccee-cCCCceeeEEECCCCCEEEEEcC----------------
Confidence 234678899999999999883 33332222233322222 1334688999999997 677622
Q ss_pred HHHHHhccchhhcccCCCCCCceEEEEEECCCCeEEEEEECCC
Q 018705 267 WELLDAYPGLISLLLPMGSDAGARVVKVDGNDGKIIRDFNDPD 309 (351)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~g~~~~~~~~~~ 309 (351)
.+.|..+|.++++.+..+..+.
T Consensus 300 ---------------------~~~i~v~d~~~~~~~~~~~~~~ 321 (337)
T 1pby_B 300 ---------------------LGDLAAYDAETLEKKGQVDLPG 321 (337)
T ss_dssp ---------------------SSEEEEEETTTCCEEEEEECGG
T ss_pred ---------------------CCcEEEEECcCCcEEEEEEcCC
Confidence 1358888986788888886543
No 98
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=99.21 E-value=5.5e-08 Score=87.67 Aligned_cols=228 Identities=11% Similarity=0.007 Sum_probs=142.1
Q ss_pred CCceEEEeeCCCeEEEEEcCCEEEEEEcCCCeEE---EEeecCCccccceEEcCCCCEEEEeCCCC-eEEEcC-CC--eE
Q 018705 53 HPEDVSVVVSKGALYTATRDGWVKYFILHNETLV---NWKHIDSQSLLGLTTTKDGGVILCDNEKG-LLKVTE-EG--VE 125 (351)
Q Consensus 53 ~pe~i~~d~~~g~lyv~~~~g~I~~~d~~~g~~~---~~~~~~~~p~~gl~~d~~G~L~v~d~~~g-l~~~~~-~g--~~ 125 (351)
...++++++++..++++..+|.|..|+..+++.. .+........ .++++++++++++....+ +..++. ++ ..
T Consensus 99 ~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~i~-~~~~~~~~~~l~~~~~dg~v~~~d~~~~~~~~ 177 (337)
T 1gxr_A 99 YIRSCKLLPDGCTLIVGGEASTLSIWDLAAPTPRIKAELTSSAPACY-ALAISPDSKVCFSCCSDGNIAVWDLHNQTLVR 177 (337)
T ss_dssp BEEEEEECTTSSEEEEEESSSEEEEEECCCC--EEEEEEECSSSCEE-EEEECTTSSEEEEEETTSCEEEEETTTTEEEE
T ss_pred cEEEEEEcCCCCEEEEEcCCCcEEEEECCCCCcceeeecccCCCceE-EEEECCCCCEEEEEeCCCcEEEEeCCCCceee
Confidence 4568899977778899999999999998776532 2223334456 899999997655443444 444443 55 44
Q ss_pred EecCCCCCcccEEEccCCcEEEEeCCCccCCcccccccccccCCceEEEEeCCCCeEEEeecCccccceEEEcCCCCEEE
Q 018705 126 AIVPDASFTNDVIAASDGTLYFTVASTKYTPTDFYKDMAEGKPYGQLRKYDPKLKETTVLHEGFYFANGIALSKNEDFVV 205 (351)
Q Consensus 126 ~l~~~~~~~n~l~~d~dG~ly~t~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~~~~~~~~~~~~~~ngi~~~~dg~~ly 205 (351)
.+......+.+++++++|..+++.+. +|.|..||..+++.............++++|+++.++
T Consensus 178 ~~~~~~~~i~~~~~~~~~~~l~~~~~-----------------dg~i~~~d~~~~~~~~~~~~~~~v~~~~~s~~~~~l~ 240 (337)
T 1gxr_A 178 QFQGHTDGASCIDISNDGTKLWTGGL-----------------DNTVRSWDLREGRQLQQHDFTSQIFSLGYCPTGEWLA 240 (337)
T ss_dssp EECCCSSCEEEEEECTTSSEEEEEET-----------------TSEEEEEETTTTEEEEEEECSSCEEEEEECTTSSEEE
T ss_pred eeecccCceEEEEECCCCCEEEEEec-----------------CCcEEEEECCCCceEeeecCCCceEEEEECCCCCEEE
Confidence 45443467889999999976666543 4689999988777655444445567899999999888
Q ss_pred EEecceeEEeecCCCCceeEEeccCCCCCCceEECCCCCEEEEEecCCchhhhhhhcChhHHHHHHhccchhhcccCCCC
Q 018705 206 VCESWKRYWLKGDRAGILDAFIENLPGGPDNINLAPDGSFWIGLIKMNQTGVRAIQKCREKWELLDAYPGLISLLLPMGS 285 (351)
Q Consensus 206 v~~~~~~~~i~~~~~~~~~~~~~~~~g~pd~i~~d~~G~lwva~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 285 (351)
++...+.+.+-+...++...+. ...+....+.++++|++.++...
T Consensus 241 ~~~~~~~i~~~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~---------------------------------- 285 (337)
T 1gxr_A 241 VGMESSNVEVLHVNKPDKYQLH-LHESCVLSLKFAYCGKWFVSTGK---------------------------------- 285 (337)
T ss_dssp EEETTSCEEEEETTSSCEEEEC-CCSSCEEEEEECTTSSEEEEEET----------------------------------
T ss_pred EEcCCCcEEEEECCCCCeEEEc-CCccceeEEEECCCCCEEEEecC----------------------------------
Confidence 7776662222222222222222 22333466789999987666543
Q ss_pred CCceEEEEEECCCCeEEEEEECCCCCcccceeEEEEE-CC-EEEEEecCCCeEEEEeC
Q 018705 286 DAGARVVKVDGNDGKIIRDFNDPDATYISFVTSAAEF-DG-NLYLASLQSNFIGILPL 341 (351)
Q Consensus 286 ~~~~~v~~~~~~~g~~~~~~~~~~g~~~~~~~~~~~~-~g-~L~ig~~~~~~i~~~~~ 341 (351)
.+.+..++.++++.+..... . ..++++... ++ .|+.++. .+.|..+++
T Consensus 286 --dg~i~~~~~~~~~~~~~~~~-~----~~v~~~~~s~~~~~l~~~~~-dg~i~iw~~ 335 (337)
T 1gxr_A 286 --DNLLNAWRTPYGASIFQSKE-S----SSVLSCDISVDDKYIVTGSG-DKKATVYEV 335 (337)
T ss_dssp --TSEEEEEETTTCCEEEEEEC-S----SCEEEEEECTTSCEEEEEET-TSCEEEEEE
T ss_pred --CCcEEEEECCCCeEEEEecC-C----CcEEEEEECCCCCEEEEecC-CCeEEEEEE
Confidence 23577778756666544432 1 245666654 33 4555553 566776654
No 99
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=99.19 E-value=1.7e-08 Score=99.11 Aligned_cols=229 Identities=10% Similarity=-0.009 Sum_probs=146.3
Q ss_pred EEeeCCCeEEEEE-cCCEEEEEEcCCCeEEEEeecCCccccceEEcCCCC-EEEEeCCCCeEEEcC---CC--eEEecCC
Q 018705 58 SVVVSKGALYTAT-RDGWVKYFILHNETLVNWKHIDSQSLLGLTTTKDGG-VILCDNEKGLLKVTE---EG--VEAIVPD 130 (351)
Q Consensus 58 ~~d~~~g~lyv~~-~~g~I~~~d~~~g~~~~~~~~~~~p~~gl~~d~~G~-L~v~d~~~gl~~~~~---~g--~~~l~~~ 130 (351)
++++ ++.+|++. .++.|..||..+++.......+..++ +++++++|+ ||+++..+.+..++. ++ ...+...
T Consensus 144 ~~~p-~~~~~vs~~~d~~V~v~D~~t~~~~~~i~~g~~~~-~v~~spdg~~l~v~~~d~~V~v~D~~~~t~~~~~~i~~g 221 (543)
T 1nir_A 144 DLDL-PNLFSVTLRDAGQIALVDGDSKKIVKVIDTGYAVH-ISRMSASGRYLLVIGRDARIDMIDLWAKEPTKVAEIKIG 221 (543)
T ss_dssp CCCG-GGEEEEEEGGGTEEEEEETTTCCEEEEEECSTTEE-EEEECTTSCEEEEEETTSEEEEEETTSSSCEEEEEEECC
T ss_pred ccCC-CCEEEEEEcCCCeEEEEECCCceEEEEEecCcccc-eEEECCCCCEEEEECCCCeEEEEECcCCCCcEEEEEecC
Confidence 4774 56777655 57899999998887644333344488 999999995 788887755655554 33 3334433
Q ss_pred CCCcccEEEcc----CCc-EEEEeCCCccCCcccccccccccCCceEEEEeCCCCeEEEeecC------------ccccc
Q 018705 131 ASFTNDVIAAS----DGT-LYFTVASTKYTPTDFYKDMAEGKPYGQLRKYDPKLKETTVLHEG------------FYFAN 193 (351)
Q Consensus 131 ~~~~n~l~~d~----dG~-ly~t~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~~~~~~~~~~------------~~~~n 193 (351)
..|.+++++| ||+ +|+++.. .+.|..||..+++....... ...+.
T Consensus 222 -~~p~~va~sp~~~~dg~~l~v~~~~-----------------~~~v~v~D~~t~~~~~~i~~~g~~~~~~~~~~~~~v~ 283 (543)
T 1nir_A 222 -IEARSVESSKFKGYEDRYTIAGAYW-----------------PPQFAIMDGETLEPKQIVSTRGMTVDTQTYHPEPRVA 283 (543)
T ss_dssp -SEEEEEEECCSTTCTTTEEEEEEEE-----------------SSEEEEEETTTCCEEEEEECCEECSSSCCEESCCCEE
T ss_pred -CCcceEEeCCCcCCCCCEEEEEEcc-----------------CCeEEEEeccccccceeecccCcccCccccccCCceE
Confidence 5799999999 985 7777642 35788889887765433221 11456
Q ss_pred eEEEcCCCCEEEEEecce-eEEeecCCCCc-eeE-EeccCCCCCCceEECCCCC-EEEEEecCCchhhhhhhcChhHHHH
Q 018705 194 GIALSKNEDFVVVCESWK-RYWLKGDRAGI-LDA-FIENLPGGPDNINLAPDGS-FWIGLIKMNQTGVRAIQKCREKWEL 269 (351)
Q Consensus 194 gi~~~~dg~~lyv~~~~~-~~~i~~~~~~~-~~~-~~~~~~g~pd~i~~d~~G~-lwva~~~~~~~~~~~~~~~~~~~~~ 269 (351)
+|++++++..+|++.... .+++.+....+ ... .. .....|.++.+|++|+ +|++....
T Consensus 284 ~i~~s~~~~~~~vs~~~~g~i~vvd~~~~~~l~~~~i-~~~~~~~~~~~spdg~~l~va~~~~----------------- 345 (543)
T 1nir_A 284 AIIASHEHPEFIVNVKETGKVLLVNYKDIDNLTVTSI-GAAPFLHDGGWDSSHRYFMTAANNS----------------- 345 (543)
T ss_dssp EEEECSSSSEEEEEETTTTEEEEEECTTSSSCEEEEE-ECCSSCCCEEECTTSCEEEEEEGGG-----------------
T ss_pred EEEECCCCCEEEEEECCCCeEEEEEecCCCcceeEEe-ccCcCccCceECCCCCEEEEEecCC-----------------
Confidence 899999998888876544 55554322111 111 11 1234688999999998 55654321
Q ss_pred HHhccchhhcccCCCCCCceEEEEEECCCCeEEEEEECCCCCcccceeEEEE-ECCEEEEEec-CCCeEEEEeCCC
Q 018705 270 LDAYPGLISLLLPMGSDAGARVVKVDGNDGKIIRDFNDPDATYISFVTSAAE-FDGNLYLASL-QSNFIGILPLDG 343 (351)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~~g~~~~~~~~~~g~~~~~~~~~~~-~~g~L~ig~~-~~~~i~~~~~~~ 343 (351)
..|..+|.++|+.+..+.............+.. .++.+|+++. ..+.|..+++.+
T Consensus 346 -------------------~~v~v~D~~tg~l~~~i~~g~~ph~g~g~~~~~p~~g~~~~s~~~~d~~V~v~d~~~ 402 (543)
T 1nir_A 346 -------------------NKVAVIDSKDRRLSALVDVGKTPHPGRGANFVHPKYGPVWSTSHLGDGSISLIGTDP 402 (543)
T ss_dssp -------------------TEEEEEETTTTEEEEEEECSSSBCCTTCEEEEETTTEEEEEEEBSSSSEEEEEECCT
T ss_pred -------------------CeEEEEECCCCeEEEeeccCCCCCCCCCcccCCCCCccEEEeccCCCceEEEEEeCC
Confidence 257779987888888876421111111122222 2478998874 468899998876
No 100
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=99.19 E-value=1.7e-09 Score=95.04 Aligned_cols=135 Identities=21% Similarity=0.195 Sum_probs=98.0
Q ss_pred CCCceEEEeeCCCeEEEEEc-CCEEEEEEcCCCeEEEEeecCCccccceEEcCCCCEEEEeCCCCeEEEcC-CC--eEEe
Q 018705 52 NHPEDVSVVVSKGALYTATR-DGWVKYFILHNETLVNWKHIDSQSLLGLTTTKDGGVILCDNEKGLLKVTE-EG--VEAI 127 (351)
Q Consensus 52 ~~pe~i~~d~~~g~lyv~~~-~g~I~~~d~~~g~~~~~~~~~~~p~~gl~~d~~G~L~v~d~~~gl~~~~~-~g--~~~l 127 (351)
...|+++.+ ++.+|+.+. ++.++.+|+++.+...-........ |++.|. ++||+++....+..+|+ +. ...+
T Consensus 87 ~FgeGit~~--g~~ly~ltw~~~~v~v~D~~t~~~~~ti~~~~eG~-glt~dg-~~L~~SdGs~~i~~iDp~T~~v~~~I 162 (262)
T 3nol_A 87 YFGEGISDW--KDKIVGLTWKNGLGFVWNIRNLRQVRSFNYDGEGW-GLTHND-QYLIMSDGTPVLRFLDPESLTPVRTI 162 (262)
T ss_dssp CCEEEEEEE--TTEEEEEESSSSEEEEEETTTCCEEEEEECSSCCC-CEEECS-SCEEECCSSSEEEEECTTTCSEEEEE
T ss_pred cceeEEEEe--CCEEEEEEeeCCEEEEEECccCcEEEEEECCCCce-EEecCC-CEEEEECCCCeEEEEcCCCCeEEEEE
Confidence 345888887 679999874 7889999998877643323344556 777653 58999997667888886 44 3333
Q ss_pred cCC-----CCCcccEEEccCCcEEEEeCCCccCCcccccccccccCCceEEEEeCCCCeEEEeecC-------------c
Q 018705 128 VPD-----ASFTNDVIAASDGTLYFTVASTKYTPTDFYKDMAEGKPYGQLRKYDPKLKETTVLHEG-------------F 189 (351)
Q Consensus 128 ~~~-----~~~~n~l~~d~dG~ly~t~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~~~~~~~~~~-------------~ 189 (351)
... ...+|.+... +|.||++... .+.|.++||++|++....+- .
T Consensus 163 ~V~~~g~~~~~lNELe~~-~G~lyan~w~-----------------~~~I~vIDp~tG~V~~~Id~~~L~~~~~~~~~~~ 224 (262)
T 3nol_A 163 TVTAHGEELPELNELEWV-DGEIFANVWQ-----------------TNKIVRIDPETGKVTGIIDLNGILAEAGPLPSPI 224 (262)
T ss_dssp ECEETTEECCCEEEEEEE-TTEEEEEETT-----------------SSEEEEECTTTCBEEEEEECTTGGGGSCSCCSSC
T ss_pred EeccCCccccccceeEEE-CCEEEEEEcc-----------------CCeEEEEECCCCcEEEEEECCcCccccccccCcC
Confidence 221 1567777776 8899998865 45899999999998655422 2
Q ss_pred cccceEEEcCCCCEEEEEe
Q 018705 190 YFANGIALSKNEDFVVVCE 208 (351)
Q Consensus 190 ~~~ngi~~~~dg~~lyv~~ 208 (351)
..+||||++|++++|||+.
T Consensus 225 ~vlNGIA~dp~~~~lfVTG 243 (262)
T 3nol_A 225 DVLNGIAWDKEHHRLFVTG 243 (262)
T ss_dssp CCEEEEEEETTTTEEEEEE
T ss_pred CceEEEEEcCCCCEEEEEC
Confidence 3679999999999999976
No 101
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=99.19 E-value=2.4e-08 Score=90.81 Aligned_cols=214 Identities=14% Similarity=0.041 Sum_probs=125.2
Q ss_pred CCceEEEeeCCCeEEEEE-cCCEEEEEEcCCCeEEEEeecC-------CccccceEEcCCCC-EEEEeCC----------
Q 018705 53 HPEDVSVVVSKGALYTAT-RDGWVKYFILHNETLVNWKHID-------SQSLLGLTTTKDGG-VILCDNE---------- 113 (351)
Q Consensus 53 ~pe~i~~d~~~g~lyv~~-~~g~I~~~d~~~g~~~~~~~~~-------~~p~~gl~~d~~G~-L~v~d~~---------- 113 (351)
.|.+++++++++.+|+.. .++.|+.+|..+++........ ..|. +++++++|+ ||++...
T Consensus 44 ~~~~~~~s~dg~~~~v~~~~~~~i~~~d~~t~~~~~~~~~~~~~~~~~~~~~-~~~~spdg~~l~~~~~~~~~~~~~~~~ 122 (349)
T 1jmx_B 44 GPGTAMMAPDNRTAYVLNNHYGDIYGIDLDTCKNTFHANLSSVPGEVGRSMY-SFAISPDGKEVYATVNPTQRLNDHYVV 122 (349)
T ss_dssp SSCEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEESCCSTTEEEECSS-CEEECTTSSEEEEEEEEEEECSSCEEE
T ss_pred CCceeEECCCCCEEEEEeCCCCcEEEEeCCCCcEEEEEEccccccccccccc-ceEECCCCCEEEEEccccccccccccc
Confidence 689999997777788766 5789999999888764332221 2377 999999995 6666632
Q ss_pred --CCeEEEcC-CC-----eEEecCCCCCcccEEEccCCcEEEEeCC-CccCCcccc-ccccc-cc---------------
Q 018705 114 --KGLLKVTE-EG-----VEAIVPDASFTNDVIAASDGTLYFTVAS-TKYTPTDFY-KDMAE-GK--------------- 167 (351)
Q Consensus 114 --~gl~~~~~-~g-----~~~l~~~~~~~n~l~~d~dG~ly~t~~~-~~~~~~~~~-~~~~~-~~--------------- 167 (351)
..+..++. ++ ...+... ..+.++++++||++|++... ..+...... ...+. +.
T Consensus 123 ~~~~i~~~d~~~~~~~~~~~~~~~~-~~~~~~~~s~dg~l~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 201 (349)
T 1jmx_B 123 KPPRLEVFSTADGLEAKPVRTFPMP-RQVYLMRAADDGSLYVAGPDIYKMDVKTGKYTVALPLRNWNRKGYSAPDVLYFW 201 (349)
T ss_dssp CCCEEEEEEGGGGGGBCCSEEEECC-SSCCCEEECTTSCEEEESSSEEEECTTTCCEEEEECSTTCCCTTBCCCBCCCCC
T ss_pred CCCeEEEEECCCccccceeeeccCC-CcccceeECCCCcEEEccCcEEEEeCCCCceeccccccccCCccccCccceeee
Confidence 45666663 43 2222222 46788899999998875431 001110000 00000 00
Q ss_pred -----------------------------CCceEEEEeCCCCeEEEee--cCccccceEEEcC-CCCEEEEEecceeEEe
Q 018705 168 -----------------------------PYGQLRKYDPKLKETTVLH--EGFYFANGIALSK-NEDFVVVCESWKRYWL 215 (351)
Q Consensus 168 -----------------------------~~g~l~~~d~~~~~~~~~~--~~~~~~ngi~~~~-dg~~lyv~~~~~~~~i 215 (351)
....++.+|..+++++.+. .....+.+++++| |++.+|++ .+++.+
T Consensus 202 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~dg~~l~~~--~~~v~~ 279 (349)
T 1jmx_B 202 PHQSPRHEFSMLYTIARFKDDKQDPATADLLYGYLSVDLKTGKTHTQEFADLTELYFTGLRSPKDPNQIYGV--LNRLAK 279 (349)
T ss_dssp CCCCTTCEEEEEEEEEEC-------CCCEEEEEEEEEETTTCCEEEEEEEECSSCEEEEEECSSCTTEEEEE--ESEEEE
T ss_pred cCCCcceeEEeeeeeeecCCCcCCccccccceeEEEEeccCCcEEecccccCCCcceeeEecCCCCCEEEEE--cCeEEE
Confidence 0001223555555544332 1223577889999 99989888 333333
Q ss_pred ecCCCCceeEEeccCCCCCCceEECCCCC-EEEEEecCCchhhhhhhcChhHHHHHHhccchhhcccCCCCCCceEEEEE
Q 018705 216 KGDRAGILDAFIENLPGGPDNINLAPDGS-FWIGLIKMNQTGVRAIQKCREKWELLDAYPGLISLLLPMGSDAGARVVKV 294 (351)
Q Consensus 216 ~~~~~~~~~~~~~~~~g~pd~i~~d~~G~-lwva~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 294 (351)
-+...++..... .....+.+++++++|+ ||++... +.|..+
T Consensus 280 ~d~~~~~~~~~~-~~~~~~~~~~~s~dg~~l~~~~~~-------------------------------------~~v~v~ 321 (349)
T 1jmx_B 280 YDLKQRKLIKAA-NLDHTYYCVAFDKKGDKLYLGGTF-------------------------------------NDLAVF 321 (349)
T ss_dssp EETTTTEEEEEE-ECSSCCCEEEECSSSSCEEEESBS-------------------------------------SEEEEE
T ss_pred EECccCeEEEEE-cCCCCccceEECCCCCEEEEecCC-------------------------------------CeEEEE
Confidence 222233332222 1234578899999985 7774211 358888
Q ss_pred ECCCCeEEEEEECC
Q 018705 295 DGNDGKIIRDFNDP 308 (351)
Q Consensus 295 ~~~~g~~~~~~~~~ 308 (351)
|.++++.+..+..+
T Consensus 322 d~~~~~~~~~~~~~ 335 (349)
T 1jmx_B 322 NPDTLEKVKNIKLP 335 (349)
T ss_dssp ETTTTEEEEEEECS
T ss_pred eccccceeeeeecC
Confidence 98678888888765
No 102
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=99.18 E-value=4.2e-08 Score=95.95 Aligned_cols=228 Identities=14% Similarity=0.200 Sum_probs=148.1
Q ss_pred CCceEEEeeCCCeEEEEEcCCEEEEEEcCCCeEEEEeecCCccccceEEcCCCCEEEEeCCCCeEEEc-CCC--eEEecC
Q 018705 53 HPEDVSVVVSKGALYTATRDGWVKYFILHNETLVNWKHIDSQSLLGLTTTKDGGVILCDNEKGLLKVT-EEG--VEAIVP 129 (351)
Q Consensus 53 ~pe~i~~d~~~g~lyv~~~~g~I~~~d~~~g~~~~~~~~~~~p~~gl~~d~~G~L~v~d~~~gl~~~~-~~g--~~~l~~ 129 (351)
...++++.|++..+.++..+|.|..|+..+.+...+......+. ++++.++|+.+++....+.+++. .++ ...+..
T Consensus 305 ~v~~~~~~~~~~~l~t~~~d~~i~~w~~~~~~~~~~~~~~~~v~-~~~~s~~g~~l~~~~~dg~v~~~~~~~~~~~~~~~ 383 (577)
T 2ymu_A 305 SVWGVAFSPDGQTIASASDDKTVKLWNRNGQHLQTLTGHSSSVW-GVAFSPDGQTIASASDDKTVKLWNRNGQLLQTLTG 383 (577)
T ss_dssp CEEEEEECTTSSEEEEEETTSCEEEEETTSCEEEEECCCSSCEE-EEEECTTSSEEEEEETTSEEEEEETTCCEEEEEEC
T ss_pred CeEEEEECCCCCEEEEEeCCCeEEEEeCCCCeeEEEeCCCCCEE-EEEECCCCCEEEEEeCCCEEEEEcCCCCEEEEecC
Confidence 34578899777788889999999999986666666554445566 89999999877665556666665 455 555544
Q ss_pred CCCCcccEEEccCCcEEEEeCCCccCCcccccccccccCCceEEEEeCCCCeEEEeecCccccceEEEcCCCCEEEEEec
Q 018705 130 DASFTNDVIAASDGTLYFTVASTKYTPTDFYKDMAEGKPYGQLRKYDPKLKETTVLHEGFYFANGIALSKNEDFVVVCES 209 (351)
Q Consensus 130 ~~~~~n~l~~d~dG~ly~t~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~~~~~~~~~~~~~~ngi~~~~dg~~lyv~~~ 209 (351)
....+.++++++||...++.+. ++.|..||.+......+...-....+++++||++.|..+..
T Consensus 384 ~~~~v~~~~~s~dg~~l~~~~~-----------------d~~v~~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~ 446 (577)
T 2ymu_A 384 HSSSVRGVAFSPDGQTIASASD-----------------DKTVKLWNRNGQLLQTLTGHSSSVWGVAFSPDDQTIASASD 446 (577)
T ss_dssp CSSCEEEEEECTTSSCEEEEET-----------------TSEEEEECTTCCEEEEEECCSSCEEEEEECTTSSEEEEEET
T ss_pred CCCCeEEEEECCCCCEEEEEeC-----------------CCEEEEEeCCCCEEEEecCCCCCeEEEEECCCCCEEEEEcC
Confidence 4467889999999976665543 46788888764444444444445678999999997777666
Q ss_pred ce--eEEeecCCCCceeEEeccCCCCCCceEECCCCCEEEEEecCCchhhhhhhcChhHHHHHHhccchhhcccCCCCCC
Q 018705 210 WK--RYWLKGDRAGILDAFIENLPGGPDNINLAPDGSFWIGLIKMNQTGVRAIQKCREKWELLDAYPGLISLLLPMGSDA 287 (351)
Q Consensus 210 ~~--~~~i~~~~~~~~~~~~~~~~g~pd~i~~d~~G~lwva~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 287 (351)
++ ++|- ........+. ........++++++|++.++...
T Consensus 447 d~~v~~w~--~~~~~~~~~~-~~~~~v~~~~~spd~~~las~~~------------------------------------ 487 (577)
T 2ymu_A 447 DKTVKLWN--RNGQLLQTLT-GHSSSVRGVAFSPDGQTIASASD------------------------------------ 487 (577)
T ss_dssp TSEEEEEE--TTSCEEEEEE-CCSSCEEEEEECTTSCEEEEEET------------------------------------
T ss_pred CCEEEEEE--CCCCEEEEEc-CCCCCEEEEEEcCCCCEEEEEeC------------------------------------
Confidence 65 5552 2222222222 22223456789999987776543
Q ss_pred ceEEEEEECCCCeEEEEEECCCCCcccceeEEEEE-CCEEEEEecCCCeEEEEeCC
Q 018705 288 GARVVKVDGNDGKIIRDFNDPDATYISFVTSAAEF-DGNLYLASLQSNFIGILPLD 342 (351)
Q Consensus 288 ~~~v~~~~~~~g~~~~~~~~~~g~~~~~~~~~~~~-~g~L~ig~~~~~~i~~~~~~ 342 (351)
.+.|..+|. +|+.+..+..+.+ .++++... +|++.+.......|..++++
T Consensus 488 d~~i~iw~~-~~~~~~~~~~h~~----~v~~l~~s~dg~~l~s~~~dg~v~lwd~~ 538 (577)
T 2ymu_A 488 DKTVKLWNR-NGQLLQTLTGHSS----SVRGVAFSPDGQTIASASDDKTVKLWNRN 538 (577)
T ss_dssp TSEEEEEET-TSCEEEEEECCSS----CEEEEEECTTSSCEEEEETTSEEEEECTT
T ss_pred CCEEEEEcC-CCCEEEEEeCCCC----CEEEEEEcCCCCEEEEEECcCEEEEEeCC
Confidence 134666787 8888887765443 36666654 34433333335556666654
No 103
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=99.18 E-value=2e-10 Score=110.18 Aligned_cols=166 Identities=9% Similarity=0.105 Sum_probs=113.2
Q ss_pred CceEecCCCcCCCceEEEeeCCCeEEEEEcCC-EEEEEEcCCCeEEEEee---------cCCccccceEEcC----CCCE
Q 018705 42 GLTKLGEGCVNHPEDVSVVVSKGALYTATRDG-WVKYFILHNETLVNWKH---------IDSQSLLGLTTTK----DGGV 107 (351)
Q Consensus 42 ~~~~i~~~~~~~pe~i~~d~~~g~lyv~~~~g-~I~~~d~~~g~~~~~~~---------~~~~p~~gl~~d~----~G~L 107 (351)
.+++++.+ +..|.+|+++ .+|++||+...| +|++++..+|+.+.+.. ..+-++ ||++++ +|.|
T Consensus 18 ~~~~~a~~-l~~P~~~a~~-pdG~l~V~e~~gg~I~~~~~~~g~~~~~~~~~~~~~~~~g~~Gll-gia~~Pdf~~~g~l 94 (454)
T 1cru_A 18 DKKVILSN-LNKPHALLWG-PDNQIWLTERATGKILRVNPESGSVKTVFQVPEIVNDADGQNGLL-GFAFHPDFKNNPYI 94 (454)
T ss_dssp CEEEEECC-CSSEEEEEEC-TTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCCTTSSCSEE-EEEECTTTTTSCEE
T ss_pred EEEEEECC-CCCceEEEEc-CCCcEEEEEcCCCEEEEEECCCCcEeEEecCCccccccCCCCcee-EEEECCCcCcCCEE
Confidence 35667766 8899999999 577899988876 79999876676654431 123467 999998 6899
Q ss_pred EEEeCC-------------CCeEEEcC---CC----eEEecC----C-CCCcccEEEccCCcEEEEeCCCccCCc-cccc
Q 018705 108 ILCDNE-------------KGLLKVTE---EG----VEAIVP----D-ASFTNDVIAASDGTLYFTVASTKYTPT-DFYK 161 (351)
Q Consensus 108 ~v~d~~-------------~gl~~~~~---~g----~~~l~~----~-~~~~n~l~~d~dG~ly~t~~~~~~~~~-~~~~ 161 (351)
|++... ..|+++.. ++ .+++.. . ...+++|++++||.|||+......... ....
T Consensus 95 Yv~~s~~~~~~~~~~~~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~H~~~~l~f~pDG~Lyv~~Gd~~~~~~~~~~~ 174 (454)
T 1cru_A 95 YISGTFKNPKSTDKELPNQTIIRRYTYNKSTDTLEKPVDLLAGLPSSKDHQSGRLVIGPDQKIYYTIGDQGRNQLAYLFL 174 (454)
T ss_dssp EEEEEEECTTC--CCSCEEEEEEEEEEETTTTEEEEEEEEEEEECCCSSCCEEEEEECTTSCEEEEECCTTTTSGGGTTS
T ss_pred EEEEeccccCCCccccccccEEEEEEECCCCCCcCCcEEEEEcCCCCCCCCCCeEeECCCCeEEEEECCCCCCCcccccc
Confidence 998752 35777762 22 222221 1 256899999999999999753211000 0000
Q ss_pred --------------ccccccCCceEEEEeCCCC-----------eEEEeecCccccceEEEcCCCCEEEEEecce
Q 018705 162 --------------DMAEGKPYGQLRKYDPKLK-----------ETTVLHEGFYFANGIALSKNEDFVVVCESWK 211 (351)
Q Consensus 162 --------------~~~~~~~~g~l~~~d~~~~-----------~~~~~~~~~~~~ngi~~~~dg~~lyv~~~~~ 211 (351)
.--.....|.|+|+++++. +.+++..++.+|.|++++++|+ ||+++.+.
T Consensus 175 ~~~~~~~p~~~~~~aq~~~~~~G~IlRi~~dG~ip~~Npf~~~~~~ei~a~G~RNp~gla~dp~G~-L~~~d~g~ 248 (454)
T 1cru_A 175 PNQAQHTPTQQELNGKDYHTYMGKVLRLNLDGSIPKDNPSFNGVVSHIYTLGHRNPQGLAFTPNGK-LLQSEQGP 248 (454)
T ss_dssp CCCTTCCCCHHHHHTTCCTTCSSEEEEECTTSCCCTTCCEETTEECSEEEBCCSEEEEEEECTTSC-EEEEEECS
T ss_pred ccccccccccccccccCCCCCCeeEEEEeCCCCCCCCCCCCCCCcceEEEECCCCcceEEECCCCC-EEEEecCC
Confidence 0000123588999999854 4567788899999999999886 99999754
No 104
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=99.17 E-value=5.3e-09 Score=99.18 Aligned_cols=222 Identities=14% Similarity=0.081 Sum_probs=133.9
Q ss_pred eEecCCCcCCCceEEEeeCCCeEEEEE----------cCCEEEEEEcCCCeEEE-Eeec-------CCccccceEEcCCC
Q 018705 44 TKLGEGCVNHPEDVSVVVSKGALYTAT----------RDGWVKYFILHNETLVN-WKHI-------DSQSLLGLTTTKDG 105 (351)
Q Consensus 44 ~~i~~~~~~~pe~i~~d~~~g~lyv~~----------~~g~I~~~d~~~g~~~~-~~~~-------~~~p~~gl~~d~~G 105 (351)
..|..| ..| +++++|++..+|++. .++.|..+|..+++... +.-. ...|. ++++++||
T Consensus 113 ~~I~vG--~~P-gia~SpDgk~lyVan~~~~~~~~G~~~~~VsviD~~t~~vv~~I~v~g~~r~~~g~~P~-~~~~spDG 188 (426)
T 3c75_H 113 GMTDGG--FLP-HPVAAEDGSFFAQASTVFERIARGKRTDYVEVFDPVTFLPIADIELPDAPRFLVGTYQW-MNALTPDN 188 (426)
T ss_dssp EEEEEC--SSC-EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCEEEEEEETTCCCCCBSCCGG-GSEECTTS
T ss_pred EEEECC--CCC-ceEECCCCCEEEEEeccccccccCCCCCEEEEEECCCCcEEEEEECCCccccccCCCcc-eEEEcCCC
Confidence 446666 358 999999889999987 35679999998887643 3222 35699 99999999
Q ss_pred -CEEEEeCC--CCeEEEcC-CC--eEEecCCC---CCccc----EEEccCCcE-EEEeCCCcc--------CCccc----
Q 018705 106 -GVILCDNE--KGLLKVTE-EG--VEAIVPDA---SFTND----VIAASDGTL-YFTVASTKY--------TPTDF---- 159 (351)
Q Consensus 106 -~L~v~d~~--~gl~~~~~-~g--~~~l~~~~---~~~n~----l~~d~dG~l-y~t~~~~~~--------~~~~~---- 159 (351)
.|||++.. +.+..+|. ++ +..+.... ..|.+ +++.+||.+ |++....+. .....
T Consensus 189 k~lyV~n~~~~~~VsVID~~t~kvv~~I~v~g~~~~~p~g~~~~v~~~~dG~~~~V~~~~~~v~~~~~~~~~v~~~p~~~ 268 (426)
T 3c75_H 189 KNLLFYQFSPAPAVGVVDLEGKTFDRMLDVPDCYHIFPASPTVFYMNCRDGSLARVDFADGETKVTNTEVFHTEDELLIN 268 (426)
T ss_dssp SEEEEEECSSSCEEEEEETTTTEEEEEEECCSEEEEEEEETTEEEEEETTSSEEEEECCTTCCEEEECCCCSCTTSCBCS
T ss_pred CEEEEEecCCCCeEEEEECCCCeEEEEEEcCCceeeccCCCcEEEEEcCCCCEEEEECCCCcEEEEeeeeeccCCCceee
Confidence 58998753 45777774 55 44443321 12333 667788864 454422111 10000
Q ss_pred -------ccccccccCCceEEEEeCCCCeEEEeec----------Cccccce---EEEcCCCCEEEEEec----------
Q 018705 160 -------YKDMAEGKPYGQLRKYDPKLKETTVLHE----------GFYFANG---IALSKNEDFVVVCES---------- 209 (351)
Q Consensus 160 -------~~~~~~~~~~g~l~~~d~~~~~~~~~~~----------~~~~~ng---i~~~~dg~~lyv~~~---------- 209 (351)
...++.-...+.|+.+|..++....... ....|.| +++++|++++|++..
T Consensus 269 ~~~~~~dg~~~~~~s~~g~V~ViD~~~~~~~v~~~~~~~~~~~i~~g~~p~g~~~va~s~dg~rlyVa~~~~~~gthk~~ 348 (426)
T 3c75_H 269 HPAFSLRSGRLVWPTYTGKIFQADLTAEGATFRAPIEALTEAERADDWRPGGWQQTAYHRQSDRIYLLVDQRDEWKHKAA 348 (426)
T ss_dssp CCEECTTTCEEEEEBTTSEEEEEEECSSCEEECCCEESSCTTTGGGTEEECSSSCEEEEGGGTEEEEEEEECCTTCTTSC
T ss_pred EeeecCCCCEEEEEeCCCcEEEEeccCCceEEeeeeeeccccccccccccCCceeeEEcCCCCEEEEEecccccccccCC
Confidence 0011111224567777765544433211 0123555 899999999999863
Q ss_pred ceeEEeecCCCCceeEEeccCCCCCCceEECCCCC-EEEEEecCCchhhhhhhcChhHHHHHHhccchhhcccCCCCCCc
Q 018705 210 WKRYWLKGDRAGILDAFIENLPGGPDNINLAPDGS-FWIGLIKMNQTGVRAIQKCREKWELLDAYPGLISLLLPMGSDAG 288 (351)
Q Consensus 210 ~~~~~i~~~~~~~~~~~~~~~~g~pd~i~~d~~G~-lwva~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 288 (351)
.+.+++-+....+...-+ ..+..|.++.++++|+ +|...... .
T Consensus 349 s~~VsVID~~T~kvv~~I-~vg~~P~gia~spDg~~~lyv~n~~-----------------------------------s 392 (426)
T 3c75_H 349 SRFVVVLNAETGERINKI-ELGHEIDSINVSQDAEPLLYALSAG-----------------------------------T 392 (426)
T ss_dssp EEEEEEEETTTCCEEEEE-EEEEEECEEEECCSSSCEEEEEETT-----------------------------------T
T ss_pred CCEEEEEECCCCeEEEEE-ECCCCcCeEEEccCCCEEEEEEcCC-----------------------------------C
Confidence 124555443333322111 1234689999999998 55554321 2
Q ss_pred eEEEEEECCCCeEEEEE
Q 018705 289 ARVVKVDGNDGKIIRDF 305 (351)
Q Consensus 289 ~~v~~~~~~~g~~~~~~ 305 (351)
+.|..||.++++++..+
T Consensus 393 ~~VsVID~~t~kvv~tI 409 (426)
T 3c75_H 393 QTLHIYDAATGEELRSV 409 (426)
T ss_dssp TEEEEEETTTCCEEEEE
T ss_pred CeEEEEECCCCCEEEEe
Confidence 36899999889998887
No 105
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=99.17 E-value=3.8e-08 Score=96.27 Aligned_cols=223 Identities=14% Similarity=0.183 Sum_probs=144.9
Q ss_pred CCceEEEeeCCCeEEEEEcCCEEEEEEcCCCeEEEEeecCCccccceEEcCCCCEEEEeCCCCeEEEc-CCC--eEEecC
Q 018705 53 HPEDVSVVVSKGALYTATRDGWVKYFILHNETLVNWKHIDSQSLLGLTTTKDGGVILCDNEKGLLKVT-EEG--VEAIVP 129 (351)
Q Consensus 53 ~pe~i~~d~~~g~lyv~~~~g~I~~~d~~~g~~~~~~~~~~~p~~gl~~d~~G~L~v~d~~~gl~~~~-~~g--~~~l~~ 129 (351)
...+++++|++..+.++..+|.|..++........+......+. +++++++|+.+++....+.+++. .++ .+.+..
T Consensus 346 ~v~~~~~s~~g~~l~~~~~dg~v~~~~~~~~~~~~~~~~~~~v~-~~~~s~dg~~l~~~~~d~~v~~~~~~~~~~~~~~~ 424 (577)
T 2ymu_A 346 SVWGVAFSPDGQTIASASDDKTVKLWNRNGQLLQTLTGHSSSVR-GVAFSPDGQTIASASDDKTVKLWNRNGQLLQTLTG 424 (577)
T ss_dssp CEEEEEECTTSSEEEEEETTSEEEEEETTCCEEEEEECCSSCEE-EEEECTTSSCEEEEETTSEEEEECTTCCEEEEEEC
T ss_pred CEEEEEECCCCCEEEEEeCCCEEEEEcCCCCEEEEecCCCCCeE-EEEECCCCCEEEEEeCCCEEEEEeCCCCEEEEecC
Confidence 44578999777788889999999999974444444444445566 89999999766655455666665 455 555544
Q ss_pred CCCCcccEEEccCCcEEEEeCCCccCCcccccccccccCCceEEEEeCCCCeEEEeecCccccceEEEcCCCCEEEEEec
Q 018705 130 DASFTNDVIAASDGTLYFTVASTKYTPTDFYKDMAEGKPYGQLRKYDPKLKETTVLHEGFYFANGIALSKNEDFVVVCES 209 (351)
Q Consensus 130 ~~~~~n~l~~d~dG~ly~t~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~~~~~~~~~~~~~~ngi~~~~dg~~lyv~~~ 209 (351)
....+.+++++||+...++.+. ++.|..||...+....+.........++++||++.|..+..
T Consensus 425 ~~~~v~~~~~s~d~~~l~~~~~-----------------d~~v~~w~~~~~~~~~~~~~~~~v~~~~~spd~~~las~~~ 487 (577)
T 2ymu_A 425 HSSSVWGVAFSPDDQTIASASD-----------------DKTVKLWNRNGQLLQTLTGHSSSVRGVAFSPDGQTIASASD 487 (577)
T ss_dssp CSSCEEEEEECTTSSEEEEEET-----------------TSEEEEEETTSCEEEEEECCSSCEEEEEECTTSCEEEEEET
T ss_pred CCCCeEEEEECCCCCEEEEEcC-----------------CCEEEEEECCCCEEEEEcCCCCCEEEEEEcCCCCEEEEEeC
Confidence 4467888999999987776543 46788888765555555444455678999999997766665
Q ss_pred ce--eEEeecCCCCceeEEeccCCCCCCceEECCCCCEEEEEecCCchhhhhhhcChhHHHHHHhccchhhcccCCCCCC
Q 018705 210 WK--RYWLKGDRAGILDAFIENLPGGPDNINLAPDGSFWIGLIKMNQTGVRAIQKCREKWELLDAYPGLISLLLPMGSDA 287 (351)
Q Consensus 210 ~~--~~~i~~~~~~~~~~~~~~~~g~pd~i~~d~~G~lwva~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 287 (351)
++ ++|-. .......+. ...+....++++++|++.++...
T Consensus 488 d~~i~iw~~--~~~~~~~~~-~h~~~v~~l~~s~dg~~l~s~~~------------------------------------ 528 (577)
T 2ymu_A 488 DKTVKLWNR--NGQLLQTLT-GHSSSVRGVAFSPDGQTIASASD------------------------------------ 528 (577)
T ss_dssp TSEEEEEET--TSCEEEEEE-CCSSCEEEEEECTTSSCEEEEET------------------------------------
T ss_pred CCEEEEEcC--CCCEEEEEe-CCCCCEEEEEEcCCCCEEEEEEC------------------------------------
Confidence 55 55532 111222232 22223456789999987666443
Q ss_pred ceEEEEEECCCCeEEEEEECCCCCcccceeEEEEE-CCEEEEEecCCCeEE
Q 018705 288 GARVVKVDGNDGKIIRDFNDPDATYISFVTSAAEF-DGNLYLASLQSNFIG 337 (351)
Q Consensus 288 ~~~v~~~~~~~g~~~~~~~~~~g~~~~~~~~~~~~-~g~L~ig~~~~~~i~ 337 (351)
.+.|..+|. +|+.+..+..+.+ .++++... +|+..++......|.
T Consensus 529 dg~v~lwd~-~~~~~~~~~~h~~----~v~~~~fs~dg~~l~s~~~D~~i~ 574 (577)
T 2ymu_A 529 DKTVKLWNR-NGQLLQTLTGHSS----SVWGVAFSPDGQTIASASSDKTVK 574 (577)
T ss_dssp TSEEEEECT-TSCEEEEEECCSS----CEEEEEECTTSSCEEEEETTSCEE
T ss_pred cCEEEEEeC-CCCEEEEEcCCCC----CEEEEEEcCCCCEEEEEeCCCEEE
Confidence 245777898 9998888876544 46677664 344434333233343
No 106
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=99.16 E-value=6.7e-09 Score=91.28 Aligned_cols=192 Identities=11% Similarity=0.086 Sum_probs=124.1
Q ss_pred ccceEEcCCCCEEEEeCCC---CeEEEcC-CC--eEEecCC-CCCcccEEEccCCcEEEEeCCCccCCcccccccccccC
Q 018705 96 LLGLTTTKDGGVILCDNEK---GLLKVTE-EG--VEAIVPD-ASFTNDVIAASDGTLYFTVASTKYTPTDFYKDMAEGKP 168 (351)
Q Consensus 96 ~~gl~~d~~G~L~v~d~~~---gl~~~~~-~g--~~~l~~~-~~~~n~l~~d~dG~ly~t~~~~~~~~~~~~~~~~~~~~ 168 (351)
. ||.++ +|.||+++... .+.+++. +| ...+... ..+..+++++ +++||+.+..
T Consensus 46 q-GL~~~-~~~LyestG~~g~S~v~~vD~~Tgkv~~~~~l~~~~FgeGit~~-g~~ly~ltw~----------------- 105 (262)
T 3nol_A 46 E-GFFYR-NGYFYESTGLNGRSSIRKVDIESGKTLQQIELGKRYFGEGISDW-KDKIVGLTWK----------------- 105 (262)
T ss_dssp E-EEEEE-TTEEEEEEEETTEEEEEEECTTTCCEEEEEECCTTCCEEEEEEE-TTEEEEEESS-----------------
T ss_pred c-eEEEE-CCEEEEECCCCCCceEEEEECCCCcEEEEEecCCccceeEEEEe-CCEEEEEEee-----------------
Confidence 5 99998 78999998654 4777884 66 3333222 1344556665 3489998864
Q ss_pred CceEEEEeCCCCeEEEeecCccccceEEEcCCCCEEEEEecceeEEeecCCCCcee-E-Eec--cCC-CCCCceEECCCC
Q 018705 169 YGQLRKYDPKLKETTVLHEGFYFANGIALSKNEDFVVVCESWKRYWLKGDRAGILD-A-FIE--NLP-GGPDNINLAPDG 243 (351)
Q Consensus 169 ~g~l~~~d~~~~~~~~~~~~~~~~ngi~~~~dg~~lyv~~~~~~~~i~~~~~~~~~-~-~~~--~~~-g~pd~i~~d~~G 243 (351)
.+.+++||+++.+...-..-. +.|..+++|++.||+++..++++.-++...+.. . -+. +.+ ..++.+.+. +|
T Consensus 106 ~~~v~v~D~~t~~~~~ti~~~--~eG~glt~dg~~L~~SdGs~~i~~iDp~T~~v~~~I~V~~~g~~~~~lNELe~~-~G 182 (262)
T 3nol_A 106 NGLGFVWNIRNLRQVRSFNYD--GEGWGLTHNDQYLIMSDGTPVLRFLDPESLTPVRTITVTAHGEELPELNELEWV-DG 182 (262)
T ss_dssp SSEEEEEETTTCCEEEEEECS--SCCCCEEECSSCEEECCSSSEEEEECTTTCSEEEEEECEETTEECCCEEEEEEE-TT
T ss_pred CCEEEEEECccCcEEEEEECC--CCceEEecCCCEEEEECCCCeEEEEcCCCCeEEEEEEeccCCccccccceeEEE-CC
Confidence 468999999887654332222 345555567778999985446665554333321 1 111 111 123346665 78
Q ss_pred CEEEEEecCCchhhhhhhcChhHHHHHHhccchhhcccCCCCCCceEEEEEECCCCeEEEEEECCCC--------Ccccc
Q 018705 244 SFWIGLIKMNQTGVRAIQKCREKWELLDAYPGLISLLLPMGSDAGARVVKVDGNDGKIIRDFNDPDA--------TYISF 315 (351)
Q Consensus 244 ~lwva~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~g~~~~~~~~~~g--------~~~~~ 315 (351)
.||+..... ..|.++||++|+++..+..+.- .....
T Consensus 183 ~lyan~w~~------------------------------------~~I~vIDp~tG~V~~~Id~~~L~~~~~~~~~~~~v 226 (262)
T 3nol_A 183 EIFANVWQT------------------------------------NKIVRIDPETGKVTGIIDLNGILAEAGPLPSPIDV 226 (262)
T ss_dssp EEEEEETTS------------------------------------SEEEEECTTTCBEEEEEECTTGGGGSCSCCSSCCC
T ss_pred EEEEEEccC------------------------------------CeEEEEECCCCcEEEEEECCcCccccccccCcCCc
Confidence 999886432 3699999999999999875321 11235
Q ss_pred eeEEEEE--CCEEEEEecCCCeEEEEeCCCCCC
Q 018705 316 VTSAAEF--DGNLYLASLQSNFIGILPLDGPEP 346 (351)
Q Consensus 316 ~~~~~~~--~g~L~ig~~~~~~i~~~~~~~~~~ 346 (351)
..+++.+ +++||++....+.++.+++....|
T Consensus 227 lNGIA~dp~~~~lfVTGK~Wp~~~ev~~~~~~~ 259 (262)
T 3nol_A 227 LNGIAWDKEHHRLFVTGKLWPKVFEITLTQRVG 259 (262)
T ss_dssp EEEEEEETTTTEEEEEETTCSEEEEEEEEECC-
T ss_pred eEEEEEcCCCCEEEEECCCCCceEEEEEecCCC
Confidence 5677765 589999999999999999865544
No 107
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=99.14 E-value=3.4e-09 Score=93.24 Aligned_cols=135 Identities=16% Similarity=0.159 Sum_probs=98.1
Q ss_pred CCCceEEEeeCCCeEEEEE-cCCEEEEEEcCCCeEEEEeecCCccccceEEcCCCCEEEEeCCCCeEEEcC-CC--eEEe
Q 018705 52 NHPEDVSVVVSKGALYTAT-RDGWVKYFILHNETLVNWKHIDSQSLLGLTTTKDGGVILCDNEKGLLKVTE-EG--VEAI 127 (351)
Q Consensus 52 ~~pe~i~~d~~~g~lyv~~-~~g~I~~~d~~~g~~~~~~~~~~~p~~gl~~d~~G~L~v~d~~~gl~~~~~-~g--~~~l 127 (351)
...|+++.+ ++.+|+.+ .++.++.+|.++.+...-......+. |++.|. ++||+++....+..+|+ +. ...+
T Consensus 96 ~FgeGit~~--g~~Ly~ltw~~~~v~V~D~~Tl~~~~ti~~~~eGw-GLt~Dg-~~L~vSdGs~~l~~iDp~T~~v~~~I 171 (268)
T 3nok_A 96 IFAEGLASD--GERLYQLTWTEGLLFTWSGMPPQRERTTRYSGEGW-GLCYWN-GKLVRSDGGTMLTFHEPDGFALVGAV 171 (268)
T ss_dssp CCEEEEEEC--SSCEEEEESSSCEEEEEETTTTEEEEEEECSSCCC-CEEEET-TEEEEECSSSEEEEECTTTCCEEEEE
T ss_pred cceeEEEEe--CCEEEEEEccCCEEEEEECCcCcEEEEEeCCCcee-EEecCC-CEEEEECCCCEEEEEcCCCCeEEEEE
Confidence 345888886 67899876 47889999998887643333345567 888763 58999997667888886 44 3333
Q ss_pred cCC-----CCCcccEEEccCCcEEEEeCCCccCCcccccccccccCCceEEEEeCCCCeEEEeecC--------------
Q 018705 128 VPD-----ASFTNDVIAASDGTLYFTVASTKYTPTDFYKDMAEGKPYGQLRKYDPKLKETTVLHEG-------------- 188 (351)
Q Consensus 128 ~~~-----~~~~n~l~~d~dG~ly~t~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~~~~~~~~~~-------------- 188 (351)
... ..++|.+... +|.||++... .+.|.++||++|++....+-
T Consensus 172 ~V~~~g~~v~~lNeLe~~-dG~lyanvw~-----------------s~~I~vIDp~TG~V~~~Idl~~L~~~~~~~~~~~ 233 (268)
T 3nok_A 172 QVKLRGQPVELINELECA-NGVIYANIWH-----------------SSDVLEIDPATGTVVGVIDASALTRAVAGQVTNP 233 (268)
T ss_dssp ECEETTEECCCEEEEEEE-TTEEEEEETT-----------------CSEEEEECTTTCBEEEEEECHHHHHHHTTTCCCT
T ss_pred EeCCCCcccccccccEEe-CCEEEEEECC-----------------CCeEEEEeCCCCcEEEEEECCCCcccccccccCc
Confidence 221 1567888876 8899998864 35899999999998654321
Q ss_pred ccccceEEEcCCCCEEEEEe
Q 018705 189 FYFANGIALSKNEDFVVVCE 208 (351)
Q Consensus 189 ~~~~ngi~~~~dg~~lyv~~ 208 (351)
...+||||+++++++|||+.
T Consensus 234 ~~vlNGIA~dp~~~rlfVTG 253 (268)
T 3nok_A 234 EAVLNGIAVEPGSGRIFMTG 253 (268)
T ss_dssp TCCEEEEEECTTTCCEEEEE
T ss_pred CCceEEEEEcCCCCEEEEeC
Confidence 13689999999999899975
No 108
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=99.14 E-value=2.4e-08 Score=87.98 Aligned_cols=183 Identities=9% Similarity=0.099 Sum_probs=116.8
Q ss_pred CCcCCCceEEEeeCCCeEEE-EEcCCEEEEEEcCCCeEE-EEeec-CCccccceEEcCCCCEEEEeCCC-CeEEEc--CC
Q 018705 49 GCVNHPEDVSVVVSKGALYT-ATRDGWVKYFILHNETLV-NWKHI-DSQSLLGLTTTKDGGVILCDNEK-GLLKVT--EE 122 (351)
Q Consensus 49 ~~~~~pe~i~~d~~~g~lyv-~~~~g~I~~~d~~~g~~~-~~~~~-~~~p~~gl~~d~~G~L~v~d~~~-gl~~~~--~~ 122 (351)
|-...+.+++++++++.||+ ...+++|+++|.+ |++. .+... ...+- ||+++++|.+||++... +++.+. .+
T Consensus 24 g~~~~lSGla~~~~~~~L~aV~d~~~~I~~ld~~-g~v~~~i~l~g~~D~E-GIa~~~~g~~~vs~E~~~~l~~~~v~~~ 101 (255)
T 3qqz_A 24 GITNNISSLTWSAQSNTLFSTINKPAAIVEMTTN-GDLIRTIPLDFVKDLE-TIEYIGDNQFVISDERDYAIYVISLTPN 101 (255)
T ss_dssp TCCSCEEEEEEETTTTEEEEEEETTEEEEEEETT-CCEEEEEECSSCSSEE-EEEECSTTEEEEEETTTTEEEEEEECTT
T ss_pred CcccCcceeEEeCCCCEEEEEECCCCeEEEEeCC-CCEEEEEecCCCCChH-HeEEeCCCEEEEEECCCCcEEEEEcCCC
Confidence 33356889999988889996 6778999999996 6654 33222 25788 99999999999987554 555554 33
Q ss_pred C-eEE---ecCC------CCCcccEEEccCC-cEEEEeCCCccCCcccccccccccCCceEEEEeC--CCCeEEEeec--
Q 018705 123 G-VEA---IVPD------ASFTNDVIAASDG-TLYFTVASTKYTPTDFYKDMAEGKPYGQLRKYDP--KLKETTVLHE-- 187 (351)
Q Consensus 123 g-~~~---l~~~------~~~~n~l~~d~dG-~ly~t~~~~~~~~~~~~~~~~~~~~~g~l~~~d~--~~~~~~~~~~-- 187 (351)
+ ... .... .....+|++|+++ +||++.... ...||.|+. .+..++....
T Consensus 102 ~~i~~~~~~~~~~~~~~~N~g~EGLA~d~~~~~L~va~E~~----------------p~~i~~~~g~~~~~~l~i~~~~~ 165 (255)
T 3qqz_A 102 SEVKILKKIKIPLQESPTNCGFEGLAYSRQDHTFWFFKEKN----------------PIEVYKVNGLLSSNELHISKDKA 165 (255)
T ss_dssp CCEEEEEEEECCCSSCCCSSCCEEEEEETTTTEEEEEEESS----------------SEEEEEEESTTCSSCCEEEECHH
T ss_pred CeeeeeeeeccccccccccCCcceEEEeCCCCEEEEEECcC----------------CceEEEEcccccCCceeeecchh
Confidence 4 222 1111 1446899999987 899876431 226888872 2223333211
Q ss_pred -----CccccceEEEcCCCCEEEEEecce-eEEeecCCCCceeEEec---cCC------CCCCceEECCCCCEEEEEe
Q 018705 188 -----GFYFANGIALSKNEDFVVVCESWK-RYWLKGDRAGILDAFIE---NLP------GGPDNINLAPDGSFWIGLI 250 (351)
Q Consensus 188 -----~~~~~ngi~~~~dg~~lyv~~~~~-~~~i~~~~~~~~~~~~~---~~~------g~pd~i~~d~~G~lwva~~ 250 (351)
...-+.+++++|..+.+|+.+... ++..-+. .++...+.. +.. ..|.||++|++|+|||...
T Consensus 166 ~~~~~~~~d~S~l~~dp~tg~lliLS~~s~~L~~~d~-~g~~~~~~~L~~g~~~l~~~~~qpEGia~d~~G~lyIvsE 242 (255)
T 3qqz_A 166 LQRQFTLDDVSGAEFNQQKNTLLVLSHESRALQEVTL-VGEVIGEMSLTKGSRGLSHNIKQAEGVAMDASGNIYIVSE 242 (255)
T ss_dssp HHHTCCSSCCCEEEEETTTTEEEEEETTTTEEEEECT-TCCEEEEEECSTTGGGCSSCCCSEEEEEECTTCCEEEEET
T ss_pred hccccccCCceeEEEcCCCCeEEEEECCCCeEEEEcC-CCCEEEEEEcCCccCCcccccCCCCeeEECCCCCEEEEcC
Confidence 133577999999888888865444 4433332 233322221 110 1478999999999999853
No 109
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.14 E-value=7.8e-08 Score=88.51 Aligned_cols=179 Identities=16% Similarity=0.159 Sum_probs=110.9
Q ss_pred CCCceEEEeeCCCeEEEEE-cCCEEEEEEcCC-CeEEE----Eeec----------CCccccceEEcCCCC-EEEEeCCC
Q 018705 52 NHPEDVSVVVSKGALYTAT-RDGWVKYFILHN-ETLVN----WKHI----------DSQSLLGLTTTKDGG-VILCDNEK 114 (351)
Q Consensus 52 ~~pe~i~~d~~~g~lyv~~-~~g~I~~~d~~~-g~~~~----~~~~----------~~~p~~gl~~d~~G~-L~v~d~~~ 114 (351)
..|..+++ +++.+|++. .++.|..++... +.+.. .... ...++ +++++++|+ ||+++...
T Consensus 100 ~~p~~~~~--dg~~l~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~-~~~~spdg~~l~~~~~~~ 176 (361)
T 3scy_A 100 ADPCYLTT--NGKNIVTANYSGGSITVFPIGQDGALLPASDVIEFKGSGPDKERQTMPHLH-CVRITPDGKYLLADDLGT 176 (361)
T ss_dssp SCEEEEEE--CSSEEEEEETTTTEEEEEEBCTTSCBCSCSEEEECCCCCSCTTTCSSCCEE-EEEECTTSSEEEEEETTT
T ss_pred CCcEEEEE--CCCEEEEEECCCCEEEEEEeCCCCcCcccceeEEccCCCCCccccCCCcce-EEEECCCCCEEEEEeCCC
Confidence 46788888 477888877 477888888743 33211 1111 12346 799999997 88888765
Q ss_pred CeEEE---cC-CC------e------EEec-CCCCCcccEEEccCCc-EEEEeCCCccCCcccccccccccCCceEEEEe
Q 018705 115 GLLKV---TE-EG------V------EAIV-PDASFTNDVIAASDGT-LYFTVASTKYTPTDFYKDMAEGKPYGQLRKYD 176 (351)
Q Consensus 115 gl~~~---~~-~g------~------~~l~-~~~~~~n~l~~d~dG~-ly~t~~~~~~~~~~~~~~~~~~~~~g~l~~~d 176 (351)
+.+++ +. .+ . .... .....|++++++|||+ +|+++.. .+.|..|+
T Consensus 177 ~~v~v~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~-----------------~~~v~v~~ 239 (361)
T 3scy_A 177 DQIHKFNINPNANADNKEKFLTKGTPEAFKVAPGSGPRHLIFNSDGKFAYLINEI-----------------GGTVIAFR 239 (361)
T ss_dssp TEEEEEEECTTCCTTTCCCCEEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETT-----------------TCEEEEEE
T ss_pred CEEEEEEEcCCCCcccccceeecccccceecCCCCCCeEEEEcCCCCEEEEEcCC-----------------CCeEEEEE
Confidence 43333 32 21 1 1111 1126789999999995 7887743 35687887
Q ss_pred CCCCeEEEeec------CccccceEEEcCCCCEEEEEecc--e--eEEeecCCCCceeEEec-cCCCCCCceEECCCCC-
Q 018705 177 PKLKETTVLHE------GFYFANGIALSKNEDFVVVCESW--K--RYWLKGDRAGILDAFIE-NLPGGPDNINLAPDGS- 244 (351)
Q Consensus 177 ~~~~~~~~~~~------~~~~~ngi~~~~dg~~lyv~~~~--~--~~~i~~~~~~~~~~~~~-~~~g~pd~i~~d~~G~- 244 (351)
.++++.+.+.. ....|.+++++|||++||++... + ++|-.+...++.+.... .....|.+++++++|+
T Consensus 240 ~~~g~~~~~~~~~~~~~~~~~~~~i~~spdg~~l~v~~~~~~~~i~v~~~~~~~g~~~~~~~~~~g~~~~~~~~spdg~~ 319 (361)
T 3scy_A 240 YADGMLDEIQTVAADTVNAQGSGDIHLSPDGKYLYASNRLKADGVAIFKVDETNGTLTKVGYQLTGIHPRNFIITPNGKY 319 (361)
T ss_dssp EETTEEEEEEEEESCSSCCCCEEEEEECTTSSEEEEEECSSSCEEEEEEECTTTCCEEEEEEEECSSCCCEEEECTTSCE
T ss_pred ecCCceEEeEEEecCCCCCCCcccEEECCCCCEEEEECCCCCCEEEEEEEcCCCCcEEEeeEecCCCCCceEEECCCCCE
Confidence 66676543321 23456799999999999998876 3 33323222333322211 1134688999999997
Q ss_pred EEEEEe
Q 018705 245 FWIGLI 250 (351)
Q Consensus 245 lwva~~ 250 (351)
||++..
T Consensus 320 l~~~~~ 325 (361)
T 3scy_A 320 LLVACR 325 (361)
T ss_dssp EEEEET
T ss_pred EEEEEC
Confidence 777653
No 110
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=99.13 E-value=5.7e-09 Score=90.94 Aligned_cols=136 Identities=18% Similarity=0.127 Sum_probs=98.2
Q ss_pred cCCCceEEEeeCCCeEEEEE-cCCEEEEEEcCCCeEEEEeecCCccccceEEcCCCCEEEEeCCCCeEEEcC-CC--eEE
Q 018705 51 VNHPEDVSVVVSKGALYTAT-RDGWVKYFILHNETLVNWKHIDSQSLLGLTTTKDGGVILCDNEKGLLKVTE-EG--VEA 126 (351)
Q Consensus 51 ~~~pe~i~~d~~~g~lyv~~-~~g~I~~~d~~~g~~~~~~~~~~~p~~gl~~d~~G~L~v~d~~~gl~~~~~-~g--~~~ 126 (351)
....|+++.+ ++.+|+.+ .++.++.+|.++.+...-....+.+. |++.| .++||+++....+..+|+ +. ...
T Consensus 64 ~~fgeGi~~~--~~~ly~ltw~~~~v~v~D~~tl~~~~ti~~~~~Gw-glt~d-g~~L~vSdgs~~l~~iDp~t~~~~~~ 139 (243)
T 3mbr_X 64 PYFGAGIVAW--RDRLIQLTWRNHEGFVYDLATLTPRARFRYPGEGW-ALTSD-DSHLYMSDGTAVIRKLDPDTLQQVGS 139 (243)
T ss_dssp TCCEEEEEEE--TTEEEEEESSSSEEEEEETTTTEEEEEEECSSCCC-EEEEC-SSCEEEECSSSEEEEECTTTCCEEEE
T ss_pred CcceeEEEEe--CCEEEEEEeeCCEEEEEECCcCcEEEEEeCCCCce-EEeeC-CCEEEEECCCCeEEEEeCCCCeEEEE
Confidence 3456888886 68899876 47889999998887643333345566 77765 358999998777888886 43 333
Q ss_pred ecCC-----CCCcccEEEccCCcEEEEeCCCccCCcccccccccccCCceEEEEeCCCCeEEEeec--------------
Q 018705 127 IVPD-----ASFTNDVIAASDGTLYFTVASTKYTPTDFYKDMAEGKPYGQLRKYDPKLKETTVLHE-------------- 187 (351)
Q Consensus 127 l~~~-----~~~~n~l~~d~dG~ly~t~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~~~~~~~~~-------------- 187 (351)
+... ...+|.+... +|.+|+.... ...|.++||++|++....+
T Consensus 140 I~V~~~g~~~~~lNeLe~~-~G~lyanvw~-----------------s~~I~vIDp~tG~V~~~idl~~l~~~~~~~~~~ 201 (243)
T 3mbr_X 140 IKVTAGGRPLDNLNELEWV-NGELLANVWL-----------------TSRIARIDPASGKVVAWIDLQALVPDADALTDS 201 (243)
T ss_dssp EECEETTEECCCEEEEEEE-TTEEEEEETT-----------------TTEEEEECTTTCBEEEEEECGGGSTTTTSCCCT
T ss_pred EEEccCCcccccceeeEEe-CCEEEEEECC-----------------CCeEEEEECCCCCEEEEEECCcCccccccccCC
Confidence 3221 1566777755 8899988865 3589999999999865432
Q ss_pred CccccceEEEcCCCCEEEEEe
Q 018705 188 GFYFANGIALSKNEDFVVVCE 208 (351)
Q Consensus 188 ~~~~~ngi~~~~dg~~lyv~~ 208 (351)
....+||||+++++++|||+.
T Consensus 202 ~~~vlNGIA~d~~~~~lfVTG 222 (243)
T 3mbr_X 202 TNDVLNGIAFDAEHDRLFVTG 222 (243)
T ss_dssp TSSCEEEEEEETTTTEEEEEE
T ss_pred cCCceEEEEEcCCCCEEEEEC
Confidence 123689999999999999986
No 111
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=99.10 E-value=5.1e-08 Score=89.77 Aligned_cols=218 Identities=12% Similarity=0.132 Sum_probs=127.0
Q ss_pred EEEEeecCCccccceEEcCCCCEEEEeC-CCCeEEEcC-CC-eEEec-------CCCCCcccEEEcc----CCcEEEEeC
Q 018705 85 LVNWKHIDSQSLLGLTTTKDGGVILCDN-EKGLLKVTE-EG-VEAIV-------PDASFTNDVIAAS----DGTLYFTVA 150 (351)
Q Consensus 85 ~~~~~~~~~~p~~gl~~d~~G~L~v~d~-~~gl~~~~~-~g-~~~l~-------~~~~~~n~l~~d~----dG~ly~t~~ 150 (351)
++.+...-..|. +|++.++|+|||++. .+.++++++ +| .+.+. .....+.+|+++| +|.||++.+
T Consensus 24 ~~~va~gL~~P~-~ia~~pdG~llVter~~G~I~~v~~~~g~~~~v~~~~~v~~~g~~GllGia~~Pdf~~~g~lYv~yt 102 (347)
T 3das_A 24 LRTVATGLNSPW-GLAPLPGGDLLVSSRDEATITRVDAKTGRKTELGEVPGVSPSGEGGLLGIALSPDYASDHMVYAYFT 102 (347)
T ss_dssp EEEEECCCSSEE-EEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCBTTBSEEEEEECTTHHHHCEEEEEEE
T ss_pred eEEeecCCCCce-EEEEcCCCcEEEEEecCCEEEEEECCCCcEeeecccCceeecCCCCceeeEeccccccCCEEEEEEe
Confidence 344444456799 999999999999998 556888875 45 44332 1226789999998 488999764
Q ss_pred CCccCCcccccccccccCCceEEEEeCCCC--------eEEEeec-----CccccceEEEcCCCCEEEEEecc-------
Q 018705 151 STKYTPTDFYKDMAEGKPYGQLRKYDPKLK--------ETTVLHE-----GFYFANGIALSKNEDFVVVCESW------- 210 (351)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~g~l~~~d~~~~--------~~~~~~~-----~~~~~ngi~~~~dg~~lyv~~~~------- 210 (351)
.. ..++|.||..+.+ +.+.+.. ...+.+.|+|++||. |||+.-.
T Consensus 103 ~~---------------~~~~v~R~~~~~~~~~~~~~~~~~~i~~~~p~~~~H~g~~l~fgpDG~-Lyvt~Gd~~~~~~~ 166 (347)
T 3das_A 103 SA---------------SDNRIVRMLYDEKKPSGEQLGAPDTVFRGIPKGVIHNGGRIAFGPDKM-LYAGTGESGDTGLS 166 (347)
T ss_dssp CS---------------SSEEEEEEEBCTTSCTTCCBCCCEEEEEEECCCSSCCCCCEEECTTSC-EEEECBCTTCGGGT
T ss_pred cC---------------CCCEEEEEEeCCCCcccccCCCcEEEEEcCCCCCCccCccccCCCCCC-EEEEECCCCCCccc
Confidence 31 1357888865431 1222222 234567799999997 9998521
Q ss_pred -------e-eEEeecC-C------CCceeEEeccCCCCCCceEECCCCCEEEEEecCCc-hhhhhhhcChhHHHHHHhcc
Q 018705 211 -------K-RYWLKGD-R------AGILDAFIENLPGGPDNINLAPDGSFWIGLIKMNQ-TGVRAIQKCREKWELLDAYP 274 (351)
Q Consensus 211 -------~-~~~i~~~-~------~~~~~~~~~~~~g~pd~i~~d~~G~lwva~~~~~~-~~~~~~~~~~~~~~~~~~~~ 274 (351)
+ .+++... + ....+++..++. .|.++++|++|+||++....+. .-+..+..+
T Consensus 167 qd~~~~~G~IlRi~~dG~ip~~nPf~~~~i~a~G~R-Np~Gla~dp~G~L~~~d~g~~~~deln~i~~G----------- 234 (347)
T 3das_A 167 QDRKSLGGKILRMTPDGEPAPGNPFPGSPVYSYGHR-NVQGLAWDDKQRLFASEFGQDTWDELNAIKPG----------- 234 (347)
T ss_dssp TCTTCSTTCEEEECTTSSBCTTCSSTTCCEEEBCCS-BCCEEEECTTCCEEEEECCSSSCEEEEEECTT-----------
T ss_pred cCCCCCCCEEEEEeCCCCccCCCCCCCCeEEeeCCC-CcceEEECCCCCEEEEecCCCCCceeeEEcCC-----------
Confidence 1 2333311 0 012356664443 4889999999999999875421 000000000
Q ss_pred chhhcccCCCCCCceEEEEEECCCC--eEEEEEECCCCCcccceeEEEEECCEEEEEecCCCeEEEEeCCCC
Q 018705 275 GLISLLLPMGSDAGARVVKVDGNDG--KIIRDFNDPDATYISFVTSAAEFDGNLYLASLQSNFIGILPLDGP 344 (351)
Q Consensus 275 ~~~~~~~~~~~~~~~~v~~~~~~~g--~~~~~~~~~~g~~~~~~~~~~~~~g~L~ig~~~~~~i~~~~~~~~ 344 (351)
....|.. ..... +. .+ ..+..+ .+. ....+.+...+|.+|++.+.+.+|.++.+...
T Consensus 235 ~nyGwP~--~~g~~------~~-~~~~~P~~~~-~~~---~~ap~G~~~~~g~~~~~~l~~~~l~~v~~~~~ 293 (347)
T 3das_A 235 DNYGWPE--AEGKG------GG-SGFHDPVAQW-STD---EASPSGIAYAEGSVWMAGLRGERLWRIPLKGT 293 (347)
T ss_dssp CBCCTTT--CCSSC------CC-TTCCCCSEEE-CTT---TCCEEEEEEETTEEEEEESTTCSEEEEEEETT
T ss_pred CEecCCc--ccCCC------CC-ccccCCcEec-CCC---CCCCcceEEEcCceeeccccCCEEEEEEecCC
Confidence 0000100 00000 00 01 011122 111 12466777889999999999999999998654
No 112
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=99.08 E-value=5.7e-08 Score=92.07 Aligned_cols=129 Identities=10% Similarity=-0.018 Sum_probs=84.8
Q ss_pred CCCeEEEEEcC-----CEEEEEEcCCCeEEEEeecCCccccceEEcCCC-CEEEEeC----------CCCeEEEcC-CC-
Q 018705 62 SKGALYTATRD-----GWVKYFILHNETLVNWKHIDSQSLLGLTTTKDG-GVILCDN----------EKGLLKVTE-EG- 123 (351)
Q Consensus 62 ~~g~lyv~~~~-----g~I~~~d~~~g~~~~~~~~~~~p~~gl~~d~~G-~L~v~d~----------~~gl~~~~~-~g- 123 (351)
+...+|+.... +.|..+|..++++..-...+..| ++++++|| .|||++. .+.+..+|. ++
T Consensus 83 ~~~~vyV~n~~~~~~~~~VsVID~~t~~vv~~I~vG~~P--gia~SpDgk~lyVan~~~~~~~~G~~~~~VsviD~~t~~ 160 (426)
T 3c75_H 83 DARRVYIQDPAHFAAITQQFVIDGSTGRILGMTDGGFLP--HPVAAEDGSFFAQASTVFERIARGKRTDYVEVFDPVTFL 160 (426)
T ss_dssp CTTEEEEEECTTTCSSEEEEEEETTTTEEEEEEEECSSC--EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCC
T ss_pred CCCEEEEECCCcCCCCCeEEEEECCCCEEEEEEECCCCC--ceEECCCCCEEEEEeccccccccCCCCCEEEEEECCCCc
Confidence 56789998763 68999999888876544555666 89999999 5999974 234777774 54
Q ss_pred -eEEecCC-------CCCcccEEEccCC-cEEEEeCCCccCCcccccccccccCCceEEEEeCCCCeEEEeecC----cc
Q 018705 124 -VEAIVPD-------ASFTNDVIAASDG-TLYFTVASTKYTPTDFYKDMAEGKPYGQLRKYDPKLKETTVLHEG----FY 190 (351)
Q Consensus 124 -~~~l~~~-------~~~~n~l~~d~dG-~ly~t~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~~~~~~~~~~----~~ 190 (351)
...+... ...|.++++++|| .+|+++.. ..+.|..+|.+++++..-... ..
T Consensus 161 vv~~I~v~g~~r~~~g~~P~~~~~spDGk~lyV~n~~----------------~~~~VsVID~~t~kvv~~I~v~g~~~~ 224 (426)
T 3c75_H 161 PIADIELPDAPRFLVGTYQWMNALTPDNKNLLFYQFS----------------PAPAVGVVDLEGKTFDRMLDVPDCYHI 224 (426)
T ss_dssp EEEEEEETTCCCCCBSCCGGGSEECTTSSEEEEEECS----------------SSCEEEEEETTTTEEEEEEECCSEEEE
T ss_pred EEEEEECCCccccccCCCcceEEEcCCCCEEEEEecC----------------CCCeEEEEECCCCeEEEEEEcCCceee
Confidence 4444221 1579999999999 69998742 124677777776655322211 12
Q ss_pred ccce----EEEcCCCCEEEEEe
Q 018705 191 FANG----IALSKNEDFVVVCE 208 (351)
Q Consensus 191 ~~ng----i~~~~dg~~lyv~~ 208 (351)
.|.| +++++||+.+|+..
T Consensus 225 ~p~g~~~~v~~~~dG~~~~V~~ 246 (426)
T 3c75_H 225 FPASPTVFYMNCRDGSLARVDF 246 (426)
T ss_dssp EEEETTEEEEEETTSSEEEEEC
T ss_pred ccCCCcEEEEEcCCCCEEEEEC
Confidence 2334 56666666555544
No 113
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=99.08 E-value=1e-08 Score=95.15 Aligned_cols=196 Identities=12% Similarity=0.111 Sum_probs=110.5
Q ss_pred cCCCceEEEeeC---CCeEEEEEc--------CCEEEEEEcCCC--e---EEEE-eec------CCccccceEEcCCCCE
Q 018705 51 VNHPEDVSVVVS---KGALYTATR--------DGWVKYFILHNE--T---LVNW-KHI------DSQSLLGLTTTKDGGV 107 (351)
Q Consensus 51 ~~~pe~i~~d~~---~g~lyv~~~--------~g~I~~~d~~~g--~---~~~~-~~~------~~~p~~gl~~d~~G~L 107 (351)
..+|.+|+++|+ ++.+|+... ..+|++++.+.+ + .+.+ ... ...+. +|+++++|.|
T Consensus 65 ~~g~~gia~~pdf~~~g~lYv~~~~~~~~g~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~~~h~~~-~l~~~pdG~L 143 (353)
T 2g8s_A 65 QGGLLDVVLAPDFAQSRRIWLSYSEVGDDGKAGTAVGYGRLSDDLSKVTDFRTVFRQMPKLSTGNHFGG-RLVFDGKGYL 143 (353)
T ss_dssp TCSEEEEEECTTHHHHCEEEEEEEEECSSSCEEEEEEEEEECTTSSBEEEEEEEEECSSCCBSSSCCCC-CEEECSSSEE
T ss_pred CCCceeEEECCCCCCCCEEEEEEeCCCCCCCceeEEEEEEECCCCCCCCceEEEEEECCCCCCCcccCc-cEEECCCCcE
Confidence 356789999975 799998753 247999876433 2 2222 111 12367 8999999999
Q ss_pred EEEeCC--------------CCeEEEcCCC-e--------------EEecCCCCCcccEEEcc-CCcEEEEeCCCcc-C-
Q 018705 108 ILCDNE--------------KGLLKVTEEG-V--------------EAIVPDASFTNDVIAAS-DGTLYFTVASTKY-T- 155 (351)
Q Consensus 108 ~v~d~~--------------~gl~~~~~~g-~--------------~~l~~~~~~~n~l~~d~-dG~ly~t~~~~~~-~- 155 (351)
|++... ..+++++++| + ++++.....|.++++|+ +|+||+++....- .
T Consensus 144 yv~~Gd~~~~~~~q~~~~~~g~I~ri~~dG~~p~~npf~~~~~~~~~i~a~G~rnp~gl~~d~~~g~l~~~d~g~~~~de 223 (353)
T 2g8s_A 144 FIALGENNQRPTAQDLDKLQGKLVRLTDQGEIPDDNPFIKESGVRAEIWSYGIRNPQGMAMNPWSNALWLNEHGPRGGDE 223 (353)
T ss_dssp EEEECCTTCGGGGGCTTSCTTEEEEEETTSCCCTTCTTTTSTTSCTTEEEECCSEEEEEEEETTTTEEEEEEECSBSCEE
T ss_pred EEEECCCCCCCccCCCCCCCeEEEEECCCCCCCCCCCCcCCCCCCccEEEEcCcCccceEEECCCCCEEEEecCCCCCcE
Confidence 999643 2588888655 2 23333346799999999 7999999864210 0
Q ss_pred --C----cccccccccccC--CceEEEEeC-----CCCeEE--EeecCccccceEEEcC-------CCCEEEEEecce-e
Q 018705 156 --P----TDFYKDMAEGKP--YGQLRKYDP-----KLKETT--VLHEGFYFANGIALSK-------NEDFVVVCESWK-R 212 (351)
Q Consensus 156 --~----~~~~~~~~~~~~--~g~l~~~d~-----~~~~~~--~~~~~~~~~ngi~~~~-------dg~~lyv~~~~~-~ 212 (351)
. ..+-....++.. .+. .+.. ..+... ........|.|+++.. +| .+|+++... +
T Consensus 224 i~~i~~G~nyGwp~~~~~~~~~~~--~~~~~~~~~~~~~~~P~~~~~~~~ap~G~~~y~g~~fp~~~g-~l~v~~~~~~~ 300 (353)
T 2g8s_A 224 INIPQKGKNYGWPLATWGINYSGF--KIPEAKGEIVAGTEQPVFYWKDSPAVSGMAFYNSDKFPQWQQ-KLFIGALKDKD 300 (353)
T ss_dssp EECCCTTCBCCTTTBCSSBCTTSS--CCTTCCBSSCTTSCCCSEEESSCCCEEEEEEECCSSSGGGTT-EEEEEETTTTE
T ss_pred EeEeccCCcCCCCCccCCCCCCCC--ccCcccCCCCCCccCCeEEeCCCcCcceeEEECCccCcccCC-cEEEEEccCCE
Confidence 0 000000000000 000 0000 000000 0011123688899874 35 499999766 4
Q ss_pred E---EeecCCCCceeEEeccCCCCCCceEECCCCCEEEEEe
Q 018705 213 Y---WLKGDRAGILDAFIENLPGGPDNINLAPDGSFWIGLI 250 (351)
Q Consensus 213 ~---~i~~~~~~~~~~~~~~~~g~pd~i~~d~~G~lwva~~ 250 (351)
+ .+.+.+....+.+.....+.|.++++++||.||+++.
T Consensus 301 v~~~~~~~~~~~~~~~~~~~~~~rp~~v~~~pdG~lyv~td 341 (353)
T 2g8s_A 301 VIVMSVNGDKVTEDGRILTDRGQRIRDVRTGPDGYLYVLTD 341 (353)
T ss_dssp EEEEEEETTEEEEEEEESGGGCCCEEEEEECTTSCEEEEEC
T ss_pred EEEEEeCCCeEeeeEEcccCCCCceeEEEECCCCcEEEEEe
Confidence 3 3332111111223323345689999999999999854
No 114
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=99.07 E-value=6.8e-08 Score=91.38 Aligned_cols=178 Identities=14% Similarity=0.061 Sum_probs=116.4
Q ss_pred CCceEEEeeCCCeEEEEEcCC---EEEEEEcCCCeEEEEeecCCccccceEEcCCCC-EEEEeCCC---CeEEEcC-CC-
Q 018705 53 HPEDVSVVVSKGALYTATRDG---WVKYFILHNETLVNWKHIDSQSLLGLTTTKDGG-VILCDNEK---GLLKVTE-EG- 123 (351)
Q Consensus 53 ~pe~i~~d~~~g~lyv~~~~g---~I~~~d~~~g~~~~~~~~~~~p~~gl~~d~~G~-L~v~d~~~---gl~~~~~-~g- 123 (351)
...+++++|++..++.+..++ .|+.+|..+++.+.+........ .++++++|+ |+++.... .++.++. ++
T Consensus 180 ~v~~~~~Spdg~~la~~s~~~~~~~i~~~d~~tg~~~~l~~~~~~~~-~~~~spdg~~la~~~~~~g~~~i~~~d~~~~~ 258 (415)
T 2hqs_A 180 PLMSPAWSPDGSKLAYVTFESGRSALVIQTLANGAVRQVASFPRHNG-APAFSPDGSKLAFALSKTGSLNLYVMDLASGQ 258 (415)
T ss_dssp CEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCEEEEECCSSCEE-EEEECTTSSEEEEEECTTSSCEEEEEETTTCC
T ss_pred cceeeEEcCCCCEEEEEEecCCCcEEEEEECCCCcEEEeecCCCccc-CEEEcCCCCEEEEEEecCCCceEEEEECCCCC
Confidence 456889998777777666553 89999998888776655455566 899999997 44343322 3777774 56
Q ss_pred eEEecCCCCCcccEEEccCCc-EEEEeCCCccCCcccccccccccCCceEEEEeCCCCeEEEeecCccccceEEEcCCCC
Q 018705 124 VEAIVPDASFTNDVIAASDGT-LYFTVASTKYTPTDFYKDMAEGKPYGQLRKYDPKLKETTVLHEGFYFANGIALSKNED 202 (351)
Q Consensus 124 ~~~l~~~~~~~n~l~~d~dG~-ly~t~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~~~~~~~~~~~~~~ngi~~~~dg~ 202 (351)
.+.+.........++++|||+ |+++... .....|+.+|..+++.+.+.........++++|||+
T Consensus 259 ~~~l~~~~~~~~~~~~spdg~~l~~~s~~---------------~g~~~i~~~d~~~~~~~~l~~~~~~~~~~~~spdG~ 323 (415)
T 2hqs_A 259 IRQVTDGRSNNTEPTWFPDSQNLAFTSDQ---------------AGRPQVYKVNINGGAPQRITWEGSQNQDADVSSDGK 323 (415)
T ss_dssp EEECCCCSSCEEEEEECTTSSEEEEEECT---------------TSSCEEEEEETTSSCCEECCCSSSEEEEEEECTTSS
T ss_pred EEeCcCCCCcccceEECCCCCEEEEEECC---------------CCCcEEEEEECCCCCEEEEecCCCcccCeEECCCCC
Confidence 655544435677899999996 5555432 012379999988887665544444566799999999
Q ss_pred EEEEEecc---eeEEeecCCCCceeEEeccCCCCCCceEECCCCCEEEE
Q 018705 203 FVVVCESW---KRYWLKGDRAGILDAFIENLPGGPDNINLAPDGSFWIG 248 (351)
Q Consensus 203 ~lyv~~~~---~~~~i~~~~~~~~~~~~~~~~g~pd~i~~d~~G~lwva 248 (351)
.|+++... ..+++-+...++...+... .....++++++|+..+.
T Consensus 324 ~l~~~~~~~g~~~i~~~d~~~~~~~~l~~~--~~~~~~~~spdg~~l~~ 370 (415)
T 2hqs_A 324 FMVMVSSNGGQQHIAKQDLATGGVQVLSST--FLDETPSLAPNGTMVIY 370 (415)
T ss_dssp EEEEEEECSSCEEEEEEETTTCCEEECCCS--SSCEEEEECTTSSEEEE
T ss_pred EEEEEECcCCceEEEEEECCCCCEEEecCC--CCcCCeEEcCCCCEEEE
Confidence 88886653 2444433333444333321 23456789999984443
No 115
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=99.04 E-value=4.3e-07 Score=84.93 Aligned_cols=232 Identities=13% Similarity=0.118 Sum_probs=144.7
Q ss_pred ceEEEeeCCCeEEEEEcCCEEEEEEcCCCeEEEE-eecCCccccceEEcCCCCEEEEeCCCCeEEEc--CCC--eEEecC
Q 018705 55 EDVSVVVSKGALYTATRDGWVKYFILHNETLVNW-KHIDSQSLLGLTTTKDGGVILCDNEKGLLKVT--EEG--VEAIVP 129 (351)
Q Consensus 55 e~i~~d~~~g~lyv~~~~g~I~~~d~~~g~~~~~-~~~~~~p~~gl~~d~~G~L~v~d~~~gl~~~~--~~g--~~~l~~ 129 (351)
.+++++|++..+.++..||.|..||..+++.... ........ .+++.++|+.+++....+.++++ .++ ...+..
T Consensus 127 ~~v~~s~dg~~l~s~~~d~~i~iwd~~~~~~~~~~~~h~~~v~-~~~~~p~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~ 205 (393)
T 1erj_A 127 RSVCFSPDGKFLATGAEDRLIRIWDIENRKIVMILQGHEQDIY-SLDYFPSGDKLVSGSGDRTVRIWDLRTGQCSLTLSI 205 (393)
T ss_dssp EEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEE-EEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEEC
T ss_pred EEEEECCCCCEEEEEcCCCeEEEEECCCCcEEEEEccCCCCEE-EEEEcCCCCEEEEecCCCcEEEEECCCCeeEEEEEc
Confidence 4789998777888999999999999987766433 33334456 89999999877766666777776 355 333322
Q ss_pred CCCCcccEEEcc-CCcEEEEeCCCccCCcccccccccccCCceEEEEeCCCCeEEEee--------cCccccceEEEcCC
Q 018705 130 DASFTNDVIAAS-DGTLYFTVASTKYTPTDFYKDMAEGKPYGQLRKYDPKLKETTVLH--------EGFYFANGIALSKN 200 (351)
Q Consensus 130 ~~~~~n~l~~d~-dG~ly~t~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~~~~~~~~--------~~~~~~ngi~~~~d 200 (351)
. ..+..+++.+ +|.++++.+. ++.|..||..+++..... ........++++++
T Consensus 206 ~-~~v~~~~~~~~~~~~l~~~s~-----------------d~~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~ 267 (393)
T 1erj_A 206 E-DGVTTVAVSPGDGKYIAAGSL-----------------DRAVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFTRD 267 (393)
T ss_dssp S-SCEEEEEECSTTCCEEEEEET-----------------TSCEEEEETTTCCEEEEEC------CCCSSCEEEEEECTT
T ss_pred C-CCcEEEEEECCCCCEEEEEcC-----------------CCcEEEEECCCCcEEEeecccccCCCCCCCCEEEEEECCC
Confidence 2 4677888988 7877776543 467888888776643322 11234567999999
Q ss_pred CCEEEEEecce--eEEe-ecCC---------CCcee-EEeccCCCCCCceEECCCCCEEEEEecCCchhhhhhhcChhHH
Q 018705 201 EDFVVVCESWK--RYWL-KGDR---------AGILD-AFIENLPGGPDNINLAPDGSFWIGLIKMNQTGVRAIQKCREKW 267 (351)
Q Consensus 201 g~~lyv~~~~~--~~~i-~~~~---------~~~~~-~~~~~~~g~pd~i~~d~~G~lwva~~~~~~~~~~~~~~~~~~~ 267 (351)
++.|+.+..++ ++|- .... .+... .+. ........++++++|.+.++...
T Consensus 268 g~~l~s~s~d~~v~~wd~~~~~~~~~~~~~~~~~~~~~~~-~h~~~v~~~~~~~~~~~l~sgs~---------------- 330 (393)
T 1erj_A 268 GQSVVSGSLDRSVKLWNLQNANNKSDSKTPNSGTCEVTYI-GHKDFVLSVATTQNDEYILSGSK---------------- 330 (393)
T ss_dssp SSEEEEEETTSEEEEEEC---------------CEEEEEE-CCSSCEEEEEECGGGCEEEEEET----------------
T ss_pred CCEEEEEeCCCEEEEEECCCCCCcccccCCCCCcceEEEe-cccCcEEEEEECCCCCEEEEEeC----------------
Confidence 99777776665 5552 1110 01111 111 11122334667777776555432
Q ss_pred HHHHhccchhhcccCCCCCCceEEEEEECCCCeEEEEEECCCCCcccceeEEEEE-------CCEEEEEecCCCeEEEEe
Q 018705 268 ELLDAYPGLISLLLPMGSDAGARVVKVDGNDGKIIRDFNDPDATYISFVTSAAEF-------DGNLYLASLQSNFIGILP 340 (351)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~g~~~~~~~~~~g~~~~~~~~~~~~-------~g~L~ig~~~~~~i~~~~ 340 (351)
.+.|..+|..+++.+..+..+.+ .+.++... ++.++++......|..++
T Consensus 331 --------------------D~~v~iwd~~~~~~~~~l~~h~~----~v~~v~~~~~~~~~p~~~~l~sgs~Dg~i~iW~ 386 (393)
T 1erj_A 331 --------------------DRGVLFWDKKSGNPLLMLQGHRN----SVISVAVANGSSLGPEYNVFATGSGDCKARIWK 386 (393)
T ss_dssp --------------------TSEEEEEETTTCCEEEEEECCSS----CEEEEEECSSCTTCTTCEEEEEEETTSEEEEEE
T ss_pred --------------------CCeEEEEECCCCeEEEEECCCCC----CEEEEEecCCcCcCCCCCEEEEECCCCcEEECc
Confidence 24677888867888888876543 35555543 356666655567788777
Q ss_pred CCCCCC
Q 018705 341 LDGPEP 346 (351)
Q Consensus 341 ~~~~~~ 346 (351)
+...+|
T Consensus 387 ~~~~~p 392 (393)
T 1erj_A 387 YKKIAP 392 (393)
T ss_dssp EEEC--
T ss_pred ccccCC
Confidence 766554
No 116
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=99.04 E-value=1.7e-07 Score=86.79 Aligned_cols=180 Identities=10% Similarity=0.096 Sum_probs=99.7
Q ss_pred eEEEEEcC--CEEEE--EEcCCCeEEEEee----cCCccccceEEcCCCC-EEEEeCCCCeEEEc-C-CC-eEEecC--C
Q 018705 65 ALYTATRD--GWVKY--FILHNETLVNWKH----IDSQSLLGLTTTKDGG-VILCDNEKGLLKVT-E-EG-VEAIVP--D 130 (351)
Q Consensus 65 ~lyv~~~~--g~I~~--~d~~~g~~~~~~~----~~~~p~~gl~~d~~G~-L~v~d~~~gl~~~~-~-~g-~~~l~~--~ 130 (351)
.+|+++.. +.|+. +|..+|+++.... ....|. .++++++|+ ||+++.. .+..++ . +| ...+.. .
T Consensus 4 ~~~vg~~~~~~~i~~~~~d~~~g~l~~~~~~~~~~~~~~~-~~a~spdg~~l~~~~~~-~v~~~~~~~~g~~~~~~~~~~ 81 (365)
T 1jof_A 4 HLMIGTWTPPGAIFTVQFDDEKLTCKLIKRTEIPQDEPIS-WMTFDHERKNIYGAAMK-KWSSFAVKSPTEIVHEASHPI 81 (365)
T ss_dssp EEEEEESSSSCEEEEEEEETTTTEEEEEEEEECCTTCCCS-EEEECTTSSEEEEEEBT-EEEEEEEEETTEEEEEEEEEC
T ss_pred EEEEEEccCCCcEEEEEEECCCCCEEEeeEEccCCCCCCc-EEEECCCCCEEEEEccc-eEEEEEECCCCCEEEeeEeec
Confidence 57888753 46765 4566787765533 123688 999999997 7877765 555555 3 66 433221 1
Q ss_pred CCCcccEEEccCCc-EEE-EeCCCccCCcccccccccccCCceEEEEeCC-CCeEEE-ee----cCccccceEEEcCCCC
Q 018705 131 ASFTNDVIAASDGT-LYF-TVASTKYTPTDFYKDMAEGKPYGQLRKYDPK-LKETTV-LH----EGFYFANGIALSKNED 202 (351)
Q Consensus 131 ~~~~n~l~~d~dG~-ly~-t~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~-~~~~~~-~~----~~~~~~ngi~~~~dg~ 202 (351)
...|.+++++|||+ +|+ +....++. .+....+. ..|.+..|+.+ .++... +. .....+++++++|||+
T Consensus 82 ~g~~~~~~~spdg~~l~~~~~~~~~~~--~~~~~~~~--~~g~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~~~spdG~ 157 (365)
T 1jof_A 82 GGHPRANDADTNTRAIFLLAAKQPPYA--VYANPFYK--FAGYGNVFSVSETGKLEKNVQNYEYQENTGIHGMVFDPTET 157 (365)
T ss_dssp CSSGGGGCTTSCCEEEEEEECSSTTCC--EEEEEESS--SCCEEEEEEECTTCCEEEEEEEEECCTTCCEEEEEECTTSS
T ss_pred CCCCccEEECCCCCEEEEEEecCCcce--eccceeec--CCceEEEEccCCCCcCcceEeeEEeCCCCcceEEEECCCCC
Confidence 13488899999997 343 22100000 00000000 13445555433 244432 21 1346789999999999
Q ss_pred EEEEEecce-eEEeecCC-CCceeEEec-cC---CCCCCceEECCCCC-EEEEEe
Q 018705 203 FVVVCESWK-RYWLKGDR-AGILDAFIE-NL---PGGPDNINLAPDGS-FWIGLI 250 (351)
Q Consensus 203 ~lyv~~~~~-~~~i~~~~-~~~~~~~~~-~~---~g~pd~i~~d~~G~-lwva~~ 250 (351)
++|+++... ++++-+.. .++...... .. ...|.+++++++|+ +|++..
T Consensus 158 ~l~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~ 212 (365)
T 1jof_A 158 YLYSADLTANKLWTHRKLASGEVELVGSVDAPDPGDHPRWVAMHPTGNYLYALME 212 (365)
T ss_dssp EEEEEETTTTEEEEEEECTTSCEEEEEEEECSSTTCCEEEEEECTTSSEEEEEET
T ss_pred EEEEEcCCCCEEEEEEECCCCCEEEeeeEecCCCCCCCCEeEECCCCCEEEEEEC
Confidence 999987644 33222111 233322111 11 23578899999996 677653
No 117
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=99.02 E-value=4.1e-07 Score=85.64 Aligned_cols=233 Identities=10% Similarity=0.124 Sum_probs=144.7
Q ss_pred CCCceEEEeeCCCeEEEEEcCCEEEEEEcCCCeEE-EEeecCCccccceEEcCCCCEEEEeCCCCeEEEc-C-CC--eEE
Q 018705 52 NHPEDVSVVVSKGALYTATRDGWVKYFILHNETLV-NWKHIDSQSLLGLTTTKDGGVILCDNEKGLLKVT-E-EG--VEA 126 (351)
Q Consensus 52 ~~pe~i~~d~~~g~lyv~~~~g~I~~~d~~~g~~~-~~~~~~~~p~~gl~~d~~G~L~v~d~~~gl~~~~-~-~g--~~~ 126 (351)
....+++++|++..+.++..||.|..||..+++.. .+........ .++++++|+++++....+.++++ . ++ ...
T Consensus 109 ~~V~~~~~~p~~~~l~s~s~Dg~i~vwd~~~~~~~~~l~~h~~~V~-~v~~~~~~~~l~sgs~D~~i~iwd~~~~~~~~~ 187 (410)
T 1vyh_C 109 SPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQ-DISFDHSGKLLASCSADMTIKLWDFQGFECIRT 187 (410)
T ss_dssp SCEEEEEECSSSSEEEEEESSSCEEEEETTTCCCCEEECCCSSCEE-EEEECTTSSEEEEEETTSCCCEEETTSSCEEEC
T ss_pred CcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEEeccCCcEE-EEEEcCCCCEEEEEeCCCeEEEEeCCCCceeEE
Confidence 34458899987788889999999999998887653 3333334456 89999999877766566666665 2 33 444
Q ss_pred ecCCCCCcccEEEccCCcEEEEeCCCccCCcccccccccccCCceEEEEeCCCCeEE-EeecCccccceEEEcCCCCEEE
Q 018705 127 IVPDASFTNDVIAASDGTLYFTVASTKYTPTDFYKDMAEGKPYGQLRKYDPKLKETT-VLHEGFYFANGIALSKNEDFVV 205 (351)
Q Consensus 127 l~~~~~~~n~l~~d~dG~ly~t~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~~~~~-~~~~~~~~~ngi~~~~dg~~ly 205 (351)
+......+.++++.|+|...++.+. ++.|..||..+++.. .+.......+.++++++++.+.
T Consensus 188 ~~~h~~~V~~v~~~p~~~~l~s~s~-----------------D~~i~~wd~~~~~~~~~~~~h~~~v~~~~~~~~g~~l~ 250 (410)
T 1vyh_C 188 MHGHDHNVSSVSIMPNGDHIVSASR-----------------DKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIA 250 (410)
T ss_dssp CCCCSSCEEEEEECSSSSEEEEEET-----------------TSEEEEEETTTCCEEEEEECCSSCEEEEEECTTSSEEE
T ss_pred EcCCCCCEEEEEEeCCCCEEEEEeC-----------------CCeEEEEECCCCcEEEEEeCCCccEEEEEECCCCCEEE
Confidence 4433467889999999987777654 568999998777643 3333334567789999999666
Q ss_pred EEecce--eEEeecCCCCce-eEEeccCCCCCCceEECCC--------------------CCEEEEEecCCchhhhhhhc
Q 018705 206 VCESWK--RYWLKGDRAGIL-DAFIENLPGGPDNINLAPD--------------------GSFWIGLIKMNQTGVRAIQK 262 (351)
Q Consensus 206 v~~~~~--~~~i~~~~~~~~-~~~~~~~~g~pd~i~~d~~--------------------G~lwva~~~~~~~~~~~~~~ 262 (351)
.+..++ ++|-.. .++. ..+. ........+.+.++ |.+.++..
T Consensus 251 s~s~D~~v~vwd~~--~~~~~~~~~-~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~sgs------------ 315 (410)
T 1vyh_C 251 SCSNDQTVRVWVVA--TKECKAELR-EHRHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGS------------ 315 (410)
T ss_dssp EEETTSCEEEEETT--TCCEEEEEC-CCSSCEEEEEECCSCGGGGGGGCCSCC-------CCEEEEEE------------
T ss_pred EEcCCCeEEEEECC--CCceeeEec-CCCceEEEEEEcCcccccchhhhccccccccCCCCCEEEEEe------------
Confidence 666665 666321 1221 1111 11111223344443 33333322
Q ss_pred ChhHHHHHHhccchhhcccCCCCCCceEEEEEECCCCeEEEEEECCCCCcccceeEEEEE-CCEEEEEecCCCeEEEEeC
Q 018705 263 CREKWELLDAYPGLISLLLPMGSDAGARVVKVDGNDGKIIRDFNDPDATYISFVTSAAEF-DGNLYLASLQSNFIGILPL 341 (351)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~g~~~~~~~~~~g~~~~~~~~~~~~-~g~L~ig~~~~~~i~~~~~ 341 (351)
..+.|..+|..+++.+..+..+.+ .++++..+ ++++.++....+.|..+++
T Consensus 316 ------------------------~D~~i~iwd~~~~~~~~~~~~h~~----~v~~v~~~~~g~~l~s~s~D~~i~vwd~ 367 (410)
T 1vyh_C 316 ------------------------RDKTIKMWDVSTGMCLMTLVGHDN----WVRGVLFHSGGKFILSCADDKTLRVWDY 367 (410)
T ss_dssp ------------------------TTSEEEEEETTTTEEEEEEECCSS----CEEEEEECSSSSCEEEEETTTEEEEECC
T ss_pred ------------------------CCCeEEEEECCCCceEEEEECCCC----cEEEEEEcCCCCEEEEEeCCCeEEEEEC
Confidence 234577778757888877765443 46666654 3443333344667888887
Q ss_pred CCCC
Q 018705 342 DGPE 345 (351)
Q Consensus 342 ~~~~ 345 (351)
.+..
T Consensus 368 ~~~~ 371 (410)
T 1vyh_C 368 KNKR 371 (410)
T ss_dssp TTSC
T ss_pred CCCc
Confidence 6543
No 118
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=99.02 E-value=2.1e-07 Score=84.51 Aligned_cols=144 Identities=8% Similarity=-0.046 Sum_probs=88.9
Q ss_pred eEEEeeCCCeEEE-EEcCCEEEEEEcCCCeEEEEeecCC--ccccceEEcCCCC-EEEEeCCC-CeEEEcC-CC--eEEe
Q 018705 56 DVSVVVSKGALYT-ATRDGWVKYFILHNETLVNWKHIDS--QSLLGLTTTKDGG-VILCDNEK-GLLKVTE-EG--VEAI 127 (351)
Q Consensus 56 ~i~~d~~~g~lyv-~~~~g~I~~~d~~~g~~~~~~~~~~--~p~~gl~~d~~G~-L~v~d~~~-gl~~~~~-~g--~~~l 127 (351)
++++. .++.+|+ +..++.|+.+|..+++......... .|. +++++++|+ +|++.... .++.++. ++ ...+
T Consensus 4 g~~~~-~~~~~~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~-~~~~s~dg~~~~v~~~~~~~i~~~d~~t~~~~~~~ 81 (349)
T 1jmx_B 4 GPALK-AGHEYMIVTNYPNNLHVVDVASDTVYKSCVMPDKFGPG-TAMMAPDNRTAYVLNNHYGDIYGIDLDTCKNTFHA 81 (349)
T ss_dssp CCCCC-TTCEEEEEEETTTEEEEEETTTTEEEEEEECSSCCSSC-EEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEE
T ss_pred ccccc-CCCEEEEEeCCCCeEEEEECCCCcEEEEEecCCCCCCc-eeEECCCCCEEEEEeCCCCcEEEEeCCCCcEEEEE
Confidence 45566 4666665 5578999999998887654333333 688 999999996 78887554 4666664 55 3333
Q ss_pred cCC------CCCcccEEEccCCc-EEEEeCCCccCCcccccccccccCCceEEEEeCCCCeEE---EeecCccccceEEE
Q 018705 128 VPD------ASFTNDVIAASDGT-LYFTVASTKYTPTDFYKDMAEGKPYGQLRKYDPKLKETT---VLHEGFYFANGIAL 197 (351)
Q Consensus 128 ~~~------~~~~n~l~~d~dG~-ly~t~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~~~~~---~~~~~~~~~ngi~~ 197 (351)
... ...++++++++||+ +|++......... .+ ....+.|+.||.++++.. ........+.++++
T Consensus 82 ~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~-----~~-~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~ 155 (349)
T 1jmx_B 82 NLSSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLND-----HY-VVKPPRLEVFSTADGLEAKPVRTFPMPRQVYLMRA 155 (349)
T ss_dssp ESCCSTTEEEECSSCEEECTTSSEEEEEEEEEEECSS-----CE-EECCCEEEEEEGGGGGGBCCSEEEECCSSCCCEEE
T ss_pred EcccccccccccccceEECCCCCEEEEEccccccccc-----cc-ccCCCeEEEEECCCccccceeeeccCCCcccceeE
Confidence 221 13489999999995 6766532000000 00 011357999998764321 11122235778889
Q ss_pred cCCCCEEEEEe
Q 018705 198 SKNEDFVVVCE 208 (351)
Q Consensus 198 ~~dg~~lyv~~ 208 (351)
++||+ +|++.
T Consensus 156 s~dg~-l~~~~ 165 (349)
T 1jmx_B 156 ADDGS-LYVAG 165 (349)
T ss_dssp CTTSC-EEEES
T ss_pred CCCCc-EEEcc
Confidence 99999 88854
No 119
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=99.01 E-value=9.9e-07 Score=82.29 Aligned_cols=242 Identities=12% Similarity=0.043 Sum_probs=137.8
Q ss_pred EecCCCcCCCceEEEeeCCCeEEEEEc----------CCEEEEEEcCCCeEEEEeec--------CCccccceEEcCCC-
Q 018705 45 KLGEGCVNHPEDVSVVVSKGALYTATR----------DGWVKYFILHNETLVNWKHI--------DSQSLLGLTTTKDG- 105 (351)
Q Consensus 45 ~i~~~~~~~pe~i~~d~~~g~lyv~~~----------~g~I~~~d~~~g~~~~~~~~--------~~~p~~gl~~d~~G- 105 (351)
.+..| ..| +++++|++..+|+... ++.|..+|..+.+....... ...|. +++++++|
T Consensus 62 ~i~~g--~~p-~i~~spDg~~lyv~n~~~~~~~rg~~~~~v~viD~~t~~~~~~i~~~~~~~~~~g~~p~-~~~~spDG~ 137 (373)
T 2mad_H 62 HVNGG--FLP-NPVAAHSGSEFALASTSFSRIAKGKRTDYVEVFDPVTFLPIADIELPDAPRFDVGPYSW-MNANTPNNA 137 (373)
T ss_pred EecCC--CCC-CeEECCCCCEEEEEeccccccccCCCCCeEEEEECCCCcEEEEEECCCccccccCCCcc-ceEECCCCC
Confidence 45555 468 9999998899999862 56789999877655332222 24588 99999999
Q ss_pred CEEEEeCC--CCeEEEcCCC---eEE-ecCCCCCcccEEEccCC-cEEEEeCCCccCCcccccccccccCCceEEEEeCC
Q 018705 106 GVILCDNE--KGLLKVTEEG---VEA-IVPDASFTNDVIAASDG-TLYFTVASTKYTPTDFYKDMAEGKPYGQLRKYDPK 178 (351)
Q Consensus 106 ~L~v~d~~--~gl~~~~~~g---~~~-l~~~~~~~n~l~~d~dG-~ly~t~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~ 178 (351)
.||+++.. +.+..++ +. ... +. .+.++.+.++| +.|++... +|.+..+|.
T Consensus 138 ~l~v~n~~~~~~v~viD-~t~~~~~~~i~----~~~~~~~~~~~~~~~~~~~~-----------------dg~~~~vd~- 194 (373)
T 2mad_H 138 DLLFFQFAAGPAVGLVV-QGGSSDDQLLS----SPTCYHIHPGAPSTFYLLCA-----------------QGGLAKTDH- 194 (373)
T ss_pred EEEEEecCCCCeEEEEE-CCCCEEeEEcC----CCceEEEEeCCCceEEEEcC-----------------CCCEEEEEC-
Confidence 58888743 4577777 44 222 21 23335555555 56666543 467778877
Q ss_pred CCeEEEeec-----Ccccc--ceEEEcCCCCEEEEEeccee-EEeecCCCCcee---EE---ec---cCCCCCCc---eE
Q 018705 179 LKETTVLHE-----GFYFA--NGIALSKNEDFVVVCESWKR-YWLKGDRAGILD---AF---IE---NLPGGPDN---IN 238 (351)
Q Consensus 179 ~~~~~~~~~-----~~~~~--ngi~~~~dg~~lyv~~~~~~-~~i~~~~~~~~~---~~---~~---~~~g~pd~---i~ 238 (351)
+++...... ....| ....+++++..+|+....+. +.++-. .+..+ .+ .. .....|++ +.
T Consensus 195 ~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~v~vid~~-~~~~~v~~~~~~~~~~~~~~~~~p~g~~~~~ 273 (373)
T 2mad_H 195 AGGAAGAGLVGAMLTAAQNLLTQPAQANKSGRIVWPVYSGKILQADIS-AAGATNKAPIDALSGGRKADTWRPGGWQQVA 273 (373)
T ss_pred CCcEEEEEeccccccCCcceeecceeEecCCEEEEEcCCceEEEEecc-CCcceEeeeeeecCCcccccceecCceEeEE
Confidence 555432111 00111 12344555554555443332 222211 11111 11 00 00113555 78
Q ss_pred ECCCC-CEEEEEecCCchhhhhhhcChhHHHHHHhccchhhcccCCCCCCceEEEEEECCCCeEEEEEECCCCCccccee
Q 018705 239 LAPDG-SFWIGLIKMNQTGVRAIQKCREKWELLDAYPGLISLLLPMGSDAGARVVKVDGNDGKIIRDFNDPDATYISFVT 317 (351)
Q Consensus 239 ~d~~G-~lwva~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~g~~~~~~~~~~g~~~~~~~ 317 (351)
++++| ++|++........ .....+.|..||.++++++..+..+. ...
T Consensus 274 ~s~d~~~lyV~~~~~~~~~---------------------------~~~~~~~V~VID~~t~~vv~~i~~g~-----~p~ 321 (373)
T 2mad_H 274 YLKSSDGIYLLTSEQSAWK---------------------------LHAAAKEVTSVTGLVGQTSSQISLGH-----DVD 321 (373)
T ss_pred ECCCCCEEEEEeccCCccc---------------------------ccCCCCeEEEEECCCCEEEEEEECCC-----CcC
Confidence 88887 5999865310000 00112468999997788888886432 233
Q ss_pred EEE--EECC-EEEEEecCCCeEEEEeCCCCCC
Q 018705 318 SAA--EFDG-NLYLASLQSNFIGILPLDGPEP 346 (351)
Q Consensus 318 ~~~--~~~g-~L~ig~~~~~~i~~~~~~~~~~ 346 (351)
++. .++. .||+++...+.|.++++.+.+.
T Consensus 322 ~i~~s~Dg~~~l~v~~~~~~~V~ViD~~t~~v 353 (373)
T 2mad_H 322 AISVAQDGGPDLYALSAGTEVLHIYDAGAGDQ 353 (373)
T ss_pred eEEECCCCCeEEEEEcCCCCeEEEEECCCCCE
Confidence 444 3455 5888777789999999877643
No 120
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=99.01 E-value=1.2e-06 Score=78.73 Aligned_cols=233 Identities=9% Similarity=0.078 Sum_probs=140.4
Q ss_pred CCCceEEEeeCCCeEEEEEcCCEEEEEEcCCCeEE-EEeecCCccccceEEcCCCCEEEEeCCCCeEEEc--CCC--eEE
Q 018705 52 NHPEDVSVVVSKGALYTATRDGWVKYFILHNETLV-NWKHIDSQSLLGLTTTKDGGVILCDNEKGLLKVT--EEG--VEA 126 (351)
Q Consensus 52 ~~pe~i~~d~~~g~lyv~~~~g~I~~~d~~~g~~~-~~~~~~~~p~~gl~~d~~G~L~v~d~~~gl~~~~--~~g--~~~ 126 (351)
..-.+++++|++..+.++..||.|..||..+++.. .+........ .+++.++|+++++....+.+++. .++ ...
T Consensus 14 ~~V~~~~fsp~~~~l~s~~~dg~v~lWd~~~~~~~~~~~~~~~~v~-~~~~~~~~~~l~s~s~d~~i~vwd~~~~~~~~~ 92 (304)
T 2ynn_A 14 DRVKGIDFHPTEPWVLTTLYSGRVELWNYETQVEVRSIQVTETPVR-AGKFIARKNWIIVGSDDFRIRVFNYNTGEKVVD 92 (304)
T ss_dssp SCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEE-EEEEEGGGTEEEEEETTSEEEEEETTTCCEEEE
T ss_pred CceEEEEECCCCCEEEEEcCCCcEEEEECCCCceeEEeeccCCcEE-EEEEeCCCCEEEEECCCCEEEEEECCCCcEEEE
Confidence 44578999988888999999999999999777543 3333333345 88899999877766666777776 355 455
Q ss_pred ecCCCCCcccEEEccCCcEEEEeCCCccCCcccccccccccCCceEEEEeCCCC-eEEE-eecCccccceEEEcC-CCCE
Q 018705 127 IVPDASFTNDVIAASDGTLYFTVASTKYTPTDFYKDMAEGKPYGQLRKYDPKLK-ETTV-LHEGFYFANGIALSK-NEDF 203 (351)
Q Consensus 127 l~~~~~~~n~l~~d~dG~ly~t~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~~-~~~~-~~~~~~~~ngi~~~~-dg~~ 203 (351)
+......++++++.|++.+.++.+. ++.|..||..++ .... +.........++++| ++..
T Consensus 93 ~~~h~~~v~~~~~~~~~~~l~sgs~-----------------D~~v~lWd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~ 155 (304)
T 2ynn_A 93 FEAHPDYIRSIAVHPTKPYVLSGSD-----------------DLTVKLWNWENNWALEQTFEGHEHFVMCVAFNPKDPST 155 (304)
T ss_dssp EECCSSCEEEEEECSSSSEEEEEET-----------------TSCEEEEEGGGTTEEEEEECCCCSCEEEEEECTTCTTE
T ss_pred EeCCCCcEEEEEEcCCCCEEEEECC-----------------CCeEEEEECCCCcchhhhhcccCCcEEEEEECCCCCCE
Confidence 5444467899999999987777654 567888887655 3322 223334567899998 5666
Q ss_pred EEEEecce--eEEeecCCCCceeEEeccCCCCCCceEEC--CCCCEEEEEecCCchhhhhhhcChhHHHHHHhccchhhc
Q 018705 204 VVVCESWK--RYWLKGDRAGILDAFIENLPGGPDNINLA--PDGSFWIGLIKMNQTGVRAIQKCREKWELLDAYPGLISL 279 (351)
Q Consensus 204 lyv~~~~~--~~~i~~~~~~~~~~~~~~~~g~pd~i~~d--~~G~lwva~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 279 (351)
+..+..++ ++|-......... +..........+.+. +++.+.++...
T Consensus 156 l~sgs~D~~v~iwd~~~~~~~~~-~~~~~~~~v~~~~~~~~~~~~~l~s~s~---------------------------- 206 (304)
T 2ynn_A 156 FASGCLDRTVKVWSLGQSTPNFT-LTTGQERGVNYVDYYPLPDKPYMITASD---------------------------- 206 (304)
T ss_dssp EEEEETTSEEEEEETTCSSCSEE-EECCCTTCEEEEEECCSTTCCEEEEEET----------------------------
T ss_pred EEEEeCCCeEEEEECCCCCccce-eccCCcCcEEEEEEEEcCCCCEEEEEcC----------------------------
Confidence 66666555 5553211111111 111111111123333 35665555432
Q ss_pred ccCCCCCCceEEEEEECCCCeEEEEEECCCCCcccceeEEEEEC-CEEEEEecCCCeEEEEeCCC
Q 018705 280 LLPMGSDAGARVVKVDGNDGKIIRDFNDPDATYISFVTSAAEFD-GNLYLASLQSNFIGILPLDG 343 (351)
Q Consensus 280 ~~~~~~~~~~~v~~~~~~~g~~~~~~~~~~g~~~~~~~~~~~~~-g~L~ig~~~~~~i~~~~~~~ 343 (351)
.+.|..+|..+++.+..+..+.+ .++.+..+. +.+.++....+.|..+++.+
T Consensus 207 --------D~~i~iWd~~~~~~~~~~~~h~~----~v~~~~~~p~~~~l~s~s~Dg~i~iWd~~~ 259 (304)
T 2ynn_A 207 --------DLTIKIWDYQTKSCVATLEGHMS----NVSFAVFHPTLPIIISGSEDGTLKIWNSST 259 (304)
T ss_dssp --------TSEEEEEETTTTEEEEEEECCSS----CEEEEEECSSSSEEEEEETTSCEEEEETTT
T ss_pred --------CCeEEEEeCCCCccceeeCCCCC----CEEEEEECCCCCEEEEEcCCCeEEEEECCC
Confidence 23566677756777777765443 355555542 33344433356677777654
No 121
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=99.01 E-value=1.8e-07 Score=85.71 Aligned_cols=232 Identities=9% Similarity=-0.013 Sum_probs=141.7
Q ss_pred CCceEEEeeCCCeEEEEEcCCEEEEEEcCCCe---EEEEeecCCccccceEEcCCCCEEEEeCCCCeEEEc--CCC--eE
Q 018705 53 HPEDVSVVVSKGALYTATRDGWVKYFILHNET---LVNWKHIDSQSLLGLTTTKDGGVILCDNEKGLLKVT--EEG--VE 125 (351)
Q Consensus 53 ~pe~i~~d~~~g~lyv~~~~g~I~~~d~~~g~---~~~~~~~~~~p~~gl~~d~~G~L~v~d~~~gl~~~~--~~g--~~ 125 (351)
.-.++++++++..++++..+|.|..|+..+++ ...+........ .++++++|+++++....+.+++. .++ ..
T Consensus 10 ~i~~~~~s~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~h~~~v~-~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~ 88 (372)
T 1k8k_C 10 PISCHAWNKDRTQIAICPNNHEVHIYEKSGNKWVQVHELKEHNGQVT-GVDWAPDSNRIVTCGTDRNAYVWTLKGRTWKP 88 (372)
T ss_dssp CCCEEEECTTSSEEEEECSSSEEEEEEEETTEEEEEEEEECCSSCEE-EEEEETTTTEEEEEETTSCEEEEEEETTEEEE
T ss_pred CeEEEEECCCCCEEEEEeCCCEEEEEeCCCCcEEeeeeecCCCCccc-EEEEeCCCCEEEEEcCCCeEEEEECCCCeeee
Confidence 45689999777788888899999999987775 334433445566 89999999876655455555554 244 22
Q ss_pred Ee--cCCCCCcccEEEccCCcEEEEeCCCccCCcccccccccccCCceEEEEeCCCCe----EEEeecC-ccccceEEEc
Q 018705 126 AI--VPDASFTNDVIAASDGTLYFTVASTKYTPTDFYKDMAEGKPYGQLRKYDPKLKE----TTVLHEG-FYFANGIALS 198 (351)
Q Consensus 126 ~l--~~~~~~~n~l~~d~dG~ly~t~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~~~----~~~~~~~-~~~~ngi~~~ 198 (351)
.+ ......+.+++++++|..+++... ++.+..||..+++ ....... ......++++
T Consensus 89 ~~~~~~~~~~v~~~~~~~~~~~l~~~~~-----------------d~~v~i~d~~~~~~~~~~~~~~~~~~~~i~~~~~~ 151 (372)
T 1k8k_C 89 TLVILRINRAARCVRWAPNEKKFAVGSG-----------------SRVISICYFEQENDWWVCKHIKKPIRSTVLSLDWH 151 (372)
T ss_dssp EEECCCCSSCEEEEEECTTSSEEEEEET-----------------TSSEEEEEEETTTTEEEEEEECTTCCSCEEEEEEC
T ss_pred eEEeecCCCceeEEEECCCCCEEEEEeC-----------------CCEEEEEEecCCCcceeeeeeecccCCCeeEEEEc
Confidence 22 222267889999999976665543 3456666544433 2222222 3456789999
Q ss_pred CCCCEEEEEecce--eEEeec----------------CCCCceeEEeccCCCCCCceEECCCCCEEEEEecCCchhhhhh
Q 018705 199 KNEDFVVVCESWK--RYWLKG----------------DRAGILDAFIENLPGGPDNINLAPDGSFWIGLIKMNQTGVRAI 260 (351)
Q Consensus 199 ~dg~~lyv~~~~~--~~~i~~----------------~~~~~~~~~~~~~~g~pd~i~~d~~G~lwva~~~~~~~~~~~~ 260 (351)
++++.++.+..++ ++|-.. ...++.........+....++++++|++.++...
T Consensus 152 ~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~--------- 222 (372)
T 1k8k_C 152 PNSVLLAAGSCDFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCGWVHGVCFSANGSRVAWVSH--------- 222 (372)
T ss_dssp TTSSEEEEEETTSCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCCCSSCEEEEEECSSSSEEEEEET---------
T ss_pred CCCCEEEEEcCCCCEEEEEcccccccccccccccccccchhhheEecCCCCCeEEEEEECCCCCEEEEEeC---------
Confidence 9999777776665 444210 0111211111112223456788899976665432
Q ss_pred hcChhHHHHHHhccchhhcccCCCCCCceEEEEEECCCCeEEEEEECCCCCcccceeEEEEE-CCEEEEEecCCCeEEEE
Q 018705 261 QKCREKWELLDAYPGLISLLLPMGSDAGARVVKVDGNDGKIIRDFNDPDATYISFVTSAAEF-DGNLYLASLQSNFIGIL 339 (351)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~g~~~~~~~~~~g~~~~~~~~~~~~-~g~L~ig~~~~~~i~~~ 339 (351)
.+.|..+|..+++.+..+..+.. .++++... ++++.+++ ..+.|..+
T Consensus 223 ---------------------------d~~i~i~d~~~~~~~~~~~~~~~----~v~~~~~~~~~~~l~~~-~d~~i~i~ 270 (372)
T 1k8k_C 223 ---------------------------DSTVCLADADKKMAVATLASETL----PLLAVTFITESSLVAAG-HDCFPVLF 270 (372)
T ss_dssp ---------------------------TTEEEEEEGGGTTEEEEEECSSC----CEEEEEEEETTEEEEEE-TTSSCEEE
T ss_pred ---------------------------CCEEEEEECCCCceeEEEccCCC----CeEEEEEecCCCEEEEE-eCCeEEEE
Confidence 13577777756777777765432 35566544 56665555 57778888
Q ss_pred eCCC
Q 018705 340 PLDG 343 (351)
Q Consensus 340 ~~~~ 343 (351)
+++.
T Consensus 271 ~~~~ 274 (372)
T 1k8k_C 271 TYDS 274 (372)
T ss_dssp EEET
T ss_pred EccC
Confidence 7765
No 122
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=99.01 E-value=1.6e-06 Score=78.79 Aligned_cols=179 Identities=12% Similarity=0.086 Sum_probs=115.0
Q ss_pred CCCceEEEeeC----CCeEEEEEcCCEEEEEEcCCCeEEEE---eecCCccccceEEcCCCCEEEEeCCCCeEEEc--CC
Q 018705 52 NHPEDVSVVVS----KGALYTATRDGWVKYFILHNETLVNW---KHIDSQSLLGLTTTKDGGVILCDNEKGLLKVT--EE 122 (351)
Q Consensus 52 ~~pe~i~~d~~----~g~lyv~~~~g~I~~~d~~~g~~~~~---~~~~~~p~~gl~~d~~G~L~v~d~~~gl~~~~--~~ 122 (351)
..-.++++.++ +..+.++..|+.|..|+..+++.... ........ .+++.+++.+.++....+.+++. .+
T Consensus 33 ~~V~~v~~~~~~~~~~~~l~tgs~D~~v~vW~~~~~~~~~~~~l~gh~~~v~-~~~~~~~~~~l~s~s~D~~i~lWd~~~ 111 (321)
T 3ow8_A 33 DAIWSVAWGTNKKENSETVVTGSLDDLVKVWKWRDERLDLQWSLEGHQLGVV-SVDISHTLPIAASSSLDAHIRLWDLEN 111 (321)
T ss_dssp SCEEEEEEC-------CEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEE-EEEECSSSSEEEEEETTSEEEEEETTT
T ss_pred CcEEEEEEecCCCCCCCEEEEEcCCCCEEEEECCCCCeeeeeeeccCCCCEE-EEEECCCCCEEEEEeCCCcEEEEECCC
Confidence 34567888643 34688899999998888766654322 12223345 78888999887776667777776 35
Q ss_pred C--eEEecCCCCCcccEEEccCCcEEEEeCCCccCCcccccccccccCCceEEEEeCCCCeEEEe-ecCccccceEEEcC
Q 018705 123 G--VEAIVPDASFTNDVIAASDGTLYFTVASTKYTPTDFYKDMAEGKPYGQLRKYDPKLKETTVL-HEGFYFANGIALSK 199 (351)
Q Consensus 123 g--~~~l~~~~~~~n~l~~d~dG~ly~t~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~~~~~~~-~~~~~~~ngi~~~~ 199 (351)
+ ...+......+..++++|+|...++.+. .|.+..|+..+++.... .........++++|
T Consensus 112 ~~~~~~~~~~~~~~~~~~~spdg~~l~~g~~-----------------dg~v~i~~~~~~~~~~~~~~~~~~v~~~~~sp 174 (321)
T 3ow8_A 112 GKQIKSIDAGPVDAWTLAFSPDSQYLATGTH-----------------VGKVNIFGVESGKKEYSLDTRGKFILSIAYSP 174 (321)
T ss_dssp TEEEEEEECCTTCCCCEEECTTSSEEEEECT-----------------TSEEEEEETTTCSEEEEEECSSSCEEEEEECT
T ss_pred CCEEEEEeCCCccEEEEEECCCCCEEEEEcC-----------------CCcEEEEEcCCCceeEEecCCCceEEEEEECC
Confidence 5 4444443356778999999987776654 46788888776655432 33334567899999
Q ss_pred CCCEEEEEecce--eEEeecCCCCceeEEeccCCCCCCceEECCCCCEEEEEe
Q 018705 200 NEDFVVVCESWK--RYWLKGDRAGILDAFIENLPGGPDNINLAPDGSFWIGLI 250 (351)
Q Consensus 200 dg~~lyv~~~~~--~~~i~~~~~~~~~~~~~~~~g~pd~i~~d~~G~lwva~~ 250 (351)
+++.|..+..++ ++| +...++..............++++++|++.++..
T Consensus 175 dg~~lasg~~dg~i~iw--d~~~~~~~~~~~~h~~~v~~l~~spd~~~l~s~s 225 (321)
T 3ow8_A 175 DGKYLASGAIDGIINIF--DIATGKLLHTLEGHAMPIRSLTFSPDSQLLVTAS 225 (321)
T ss_dssp TSSEEEEEETTSCEEEE--ETTTTEEEEEECCCSSCCCEEEECTTSCEEEEEC
T ss_pred CCCEEEEEcCCCeEEEE--ECCCCcEEEEEcccCCceeEEEEcCCCCEEEEEc
Confidence 999777777666 444 2222332111112223346789999998777654
No 123
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=99.00 E-value=1.4e-07 Score=82.91 Aligned_cols=187 Identities=13% Similarity=0.124 Sum_probs=119.8
Q ss_pred ceEEcCCCCEEEEeCCCC-eEEEcC-CC--eEEecCCCCCcccEEEccCCcEEEEeCCCccCCcccccccccccCCceEE
Q 018705 98 GLTTTKDGGVILCDNEKG-LLKVTE-EG--VEAIVPDASFTNDVIAASDGTLYFTVASTKYTPTDFYKDMAEGKPYGQLR 173 (351)
Q Consensus 98 gl~~d~~G~L~v~d~~~g-l~~~~~-~g--~~~l~~~~~~~n~l~~d~dG~ly~t~~~~~~~~~~~~~~~~~~~~~g~l~ 173 (351)
||.++ ++.||+++...| +.+++. +| ...+.....+..+++++. ++||+.+.. .+.++
T Consensus 59 GL~~~-~~~Ly~stG~~g~v~~iD~~Tgkv~~~~l~~~~FgeGit~~g-~~Ly~ltw~-----------------~~~v~ 119 (268)
T 3nok_A 59 GLVFH-QGHFFESTGHQGTLRQLSLESAQPVWMERLGNIFAEGLASDG-ERLYQLTWT-----------------EGLLF 119 (268)
T ss_dssp EEEEE-TTEEEEEETTTTEEEECCSSCSSCSEEEECTTCCEEEEEECS-SCEEEEESS-----------------SCEEE
T ss_pred eEEEE-CCEEEEEcCCCCEEEEEECCCCcEEeEECCCCcceeEEEEeC-CEEEEEEcc-----------------CCEEE
Confidence 89987 579999997754 555564 66 444422224455677653 489998764 46899
Q ss_pred EEeCCCCeEEEeecCccccceEEEcCCCCEEEEEecceeEEeecCCCCcee--EEecc--CC-CCCCceEECCCCCEEEE
Q 018705 174 KYDPKLKETTVLHEGFYFANGIALSKNEDFVVVCESWKRYWLKGDRAGILD--AFIEN--LP-GGPDNINLAPDGSFWIG 248 (351)
Q Consensus 174 ~~d~~~~~~~~~~~~~~~~ngi~~~~dg~~lyv~~~~~~~~i~~~~~~~~~--~~~~~--~~-g~pd~i~~d~~G~lwva 248 (351)
.||+++.+...-..- .+.|..+.+|++.||+++..+++++-++...+.. +-+.. .+ ...+.+.+. +|.||+.
T Consensus 120 V~D~~Tl~~~~ti~~--~~eGwGLt~Dg~~L~vSdGs~~l~~iDp~T~~v~~~I~V~~~g~~v~~lNeLe~~-dG~lyan 196 (268)
T 3nok_A 120 TWSGMPPQRERTTRY--SGEGWGLCYWNGKLVRSDGGTMLTFHEPDGFALVGAVQVKLRGQPVELINELECA-NGVIYAN 196 (268)
T ss_dssp EEETTTTEEEEEEEC--SSCCCCEEEETTEEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TTEEEEE
T ss_pred EEECCcCcEEEEEeC--CCceeEEecCCCEEEEECCCCEEEEEcCCCCeEEEEEEeCCCCcccccccccEEe-CCEEEEE
Confidence 999998776443322 2344555567888999985446555444332221 11111 11 123445554 7899987
Q ss_pred EecCCchhhhhhhcChhHHHHHHhccchhhcccCCCCCCceEEEEEECCCCeEEEEEECC---------CCCcccceeEE
Q 018705 249 LIKMNQTGVRAIQKCREKWELLDAYPGLISLLLPMGSDAGARVVKVDGNDGKIIRDFNDP---------DATYISFVTSA 319 (351)
Q Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~g~~~~~~~~~---------~g~~~~~~~~~ 319 (351)
.... ..|.++||++|+++..+.-. .....+...++
T Consensus 197 vw~s------------------------------------~~I~vIDp~TG~V~~~Idl~~L~~~~~~~~~~~~~vlNGI 240 (268)
T 3nok_A 197 IWHS------------------------------------SDVLEIDPATGTVVGVIDASALTRAVAGQVTNPEAVLNGI 240 (268)
T ss_dssp ETTC------------------------------------SEEEEECTTTCBEEEEEECHHHHHHHTTTCCCTTCCEEEE
T ss_pred ECCC------------------------------------CeEEEEeCCCCcEEEEEECCCCcccccccccCcCCceEEE
Confidence 6431 26999999999999988642 11112355677
Q ss_pred EEE--CCEEEEEecCCCeEEEEeCC
Q 018705 320 AEF--DGNLYLASLQSNFIGILPLD 342 (351)
Q Consensus 320 ~~~--~g~L~ig~~~~~~i~~~~~~ 342 (351)
+.+ +++||++....+.++.++++
T Consensus 241 A~dp~~~rlfVTGK~Wp~~~ev~~~ 265 (268)
T 3nok_A 241 AVEPGSGRIFMTGKLWPRLFEVRLD 265 (268)
T ss_dssp EECTTTCCEEEEETTCSEEEEEEEE
T ss_pred EEcCCCCEEEEeCCCCCceEEEEEE
Confidence 765 57999999999999998874
No 124
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=99.00 E-value=5e-07 Score=88.95 Aligned_cols=225 Identities=11% Similarity=-0.016 Sum_probs=142.7
Q ss_pred CCeEEEEEc-CCEEEEEEcCCCeEEEEeecCCccccceEEcCCCC-EEEEeCCCCeEEEcC---CC--eEEecCCCCCcc
Q 018705 63 KGALYTATR-DGWVKYFILHNETLVNWKHIDSQSLLGLTTTKDGG-VILCDNEKGLLKVTE---EG--VEAIVPDASFTN 135 (351)
Q Consensus 63 ~g~lyv~~~-~g~I~~~d~~~g~~~~~~~~~~~p~~gl~~d~~G~-L~v~d~~~gl~~~~~---~g--~~~l~~~~~~~n 135 (351)
++.+|+... ++.|..+|..++++......+..|+ +++++++|+ +|+++....+..++. ++ +..+..+ ..|.
T Consensus 166 ~~~~~V~~~~~~~V~viD~~t~~v~~~i~~g~~p~-~v~~SpDGr~lyv~~~dg~V~viD~~~~t~~~v~~i~~G-~~P~ 243 (567)
T 1qks_A 166 ENLFSVTLRDAGQIALIDGSTYEIKTVLDTGYAVH-ISRLSASGRYLFVIGRDGKVNMIDLWMKEPTTVAEIKIG-SEAR 243 (567)
T ss_dssp GGEEEEEETTTTEEEEEETTTCCEEEEEECSSCEE-EEEECTTSCEEEEEETTSEEEEEETTSSSCCEEEEEECC-SEEE
T ss_pred CceEEEEeCCCCeEEEEECCCCeEEEEEeCCCCcc-ceEECCCCCEEEEEcCCCeEEEEECCCCCCcEeEEEecC-CCCc
Confidence 567887664 7899999998887755445566789 999999995 788886666888875 33 3334333 5799
Q ss_pred cEEEc----cCC-cEEEEeCCCccCCcccccccccccCCceEEEEeCCCCeEEEeecCc------------cccceEEEc
Q 018705 136 DVIAA----SDG-TLYFTVASTKYTPTDFYKDMAEGKPYGQLRKYDPKLKETTVLHEGF------------YFANGIALS 198 (351)
Q Consensus 136 ~l~~d----~dG-~ly~t~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~~~~~~~~~~~------------~~~ngi~~~ 198 (351)
+++++ ||| .+|+++.. .+.+..+|..+.+........ ....+|..+
T Consensus 244 ~ia~s~~~~pDGk~l~v~n~~-----------------~~~v~ViD~~t~~~~~~i~~~~~~~~~~~~~p~~rva~i~~s 306 (567)
T 1qks_A 244 SIETSKMEGWEDKYAIAGAYW-----------------PPQYVIMDGETLEPKKIQSTRGMTYDEQEYHPEPRVAAILAS 306 (567)
T ss_dssp EEEECCSTTCTTTEEEEEEEE-----------------TTEEEEEETTTCCEEEEEECCEECTTTCCEESCCCEEEEEEC
T ss_pred eeEEccccCCCCCEEEEEEcc-----------------CCeEEEEECCCCcEEEEEeccccccccccccCCCceEEEEEc
Confidence 99999 698 58888753 467889998877654322111 123478888
Q ss_pred CCCCEEEEEecce-eEEeecCCCC-ceeEEeccCCCCCCceEECCCCC-EEEEEecCCchhhhhhhcChhHHHHHHhccc
Q 018705 199 KNEDFVVVCESWK-RYWLKGDRAG-ILDAFIENLPGGPDNINLAPDGS-FWIGLIKMNQTGVRAIQKCREKWELLDAYPG 275 (351)
Q Consensus 199 ~dg~~lyv~~~~~-~~~i~~~~~~-~~~~~~~~~~g~pd~i~~d~~G~-lwva~~~~~~~~~~~~~~~~~~~~~~~~~~~ 275 (351)
+++..++++-... .+++.+.... ...+..-....++.++.+|++|+ +|++....
T Consensus 307 ~~~~~~vv~~~~~g~v~~vd~~~~~~~~v~~i~~~~~~~d~~~~pdgr~~~va~~~s----------------------- 363 (567)
T 1qks_A 307 HYRPEFIVNVKETGKILLVDYTDLNNLKTTEISAERFLHDGGLDGSHRYFITAANAR----------------------- 363 (567)
T ss_dssp SSSSEEEEEETTTTEEEEEETTCSSEEEEEEEECCSSEEEEEECTTSCEEEEEEGGG-----------------------
T ss_pred CCCCEEEEEecCCCeEEEEecCCCccceeeeeeccccccCceECCCCCEEEEEeCCC-----------------------
Confidence 8877666655333 6666542211 11111101223567889999998 55665331
Q ss_pred hhhcccCCCCCCceEEEEEECCCCeEEEEEEC-CCCCcccc-eeEEEE-ECCEEEEEe-cCCCeEEEEeCCC
Q 018705 276 LISLLLPMGSDAGARVVKVDGNDGKIIRDFND-PDATYISF-VTSAAE-FDGNLYLAS-LQSNFIGILPLDG 343 (351)
Q Consensus 276 ~~~~~~~~~~~~~~~v~~~~~~~g~~~~~~~~-~~g~~~~~-~~~~~~-~~g~L~ig~-~~~~~i~~~~~~~ 343 (351)
..|..+|.++++++..+.. .. .+... -..+.. .++.+|+.+ ...+.|.+++..+
T Consensus 364 -------------n~V~ViD~~t~kl~~~i~vgg~-~Phpg~g~~~~~p~~g~v~~t~~~g~~~Vsvid~~~ 421 (567)
T 1qks_A 364 -------------NKLVVIDTKEGKLVAIEDTGGQ-TPHPGRGANFVHPTFGPVWATSHMGDDSVALIGTDP 421 (567)
T ss_dssp -------------TEEEEEETTTTEEEEEEECSSS-SBCCTTCEEEEETTTEEEEEEEBSSSSEEEEEECCT
T ss_pred -------------CeEEEEECCCCcEEEEEeccCc-CCCCccceeeECCCCCcEEEeCCCCCCeEEEecCCC
Confidence 2577889877888777653 21 11111 112222 247899865 4457899998765
No 125
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=98.97 E-value=6e-07 Score=88.38 Aligned_cols=242 Identities=16% Similarity=0.149 Sum_probs=147.0
Q ss_pred EecCCCcCCCceEEEeeCCCeEEEEEcCCEEEEEEcC--CCeEEEEeecCCccccceEEc----CCC-CEEEEeCCCC-e
Q 018705 45 KLGEGCVNHPEDVSVVVSKGALYTATRDGWVKYFILH--NETLVNWKHIDSQSLLGLTTT----KDG-GVILCDNEKG-L 116 (351)
Q Consensus 45 ~i~~~~~~~pe~i~~d~~~g~lyv~~~~g~I~~~d~~--~g~~~~~~~~~~~p~~gl~~d----~~G-~L~v~d~~~g-l 116 (351)
.+..+ ..|++++++|++..+|++..++.|..+|.. +++...-...+..|. +++++ ++| .+|+++...+ +
T Consensus 192 ~i~~g--~~p~~v~~SpDGr~lyv~~~dg~V~viD~~~~t~~~v~~i~~G~~P~-~ia~s~~~~pDGk~l~v~n~~~~~v 268 (567)
T 1qks_A 192 VLDTG--YAVHISRLSASGRYLFVIGRDGKVNMIDLWMKEPTTVAEIKIGSEAR-SIETSKMEGWEDKYAIAGAYWPPQY 268 (567)
T ss_dssp EEECS--SCEEEEEECTTSCEEEEEETTSEEEEEETTSSSCCEEEEEECCSEEE-EEEECCSTTCTTTEEEEEEEETTEE
T ss_pred EEeCC--CCccceEECCCCCEEEEEcCCCeEEEEECCCCCCcEeEEEecCCCCc-eeEEccccCCCCCEEEEEEccCCeE
Confidence 44444 468899999888899999999999999985 555543334566799 99999 588 5888876644 4
Q ss_pred EEEcC-CC--eEEecCCC-----------CCcccEEEccCCc-EEEEeCCCccCCcccccccccccCCceEEEEeCCCCe
Q 018705 117 LKVTE-EG--VEAIVPDA-----------SFTNDVIAASDGT-LYFTVASTKYTPTDFYKDMAEGKPYGQLRKYDPKLKE 181 (351)
Q Consensus 117 ~~~~~-~g--~~~l~~~~-----------~~~n~l~~d~dG~-ly~t~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~~~ 181 (351)
..++. +. ++.+.... ..+..+..++++. ++++... .|.|+.+|..+.+
T Consensus 269 ~ViD~~t~~~~~~i~~~~~~~~~~~~~p~~rva~i~~s~~~~~~vv~~~~-----------------~g~v~~vd~~~~~ 331 (567)
T 1qks_A 269 VIMDGETLEPKKIQSTRGMTYDEQEYHPEPRVAAILASHYRPEFIVNVKE-----------------TGKILLVDYTDLN 331 (567)
T ss_dssp EEEETTTCCEEEEEECCEECTTTCCEESCCCEEEEEECSSSSEEEEEETT-----------------TTEEEEEETTCSS
T ss_pred EEEECCCCcEEEEEeccccccccccccCCCceEEEEEcCCCCEEEEEecC-----------------CCeEEEEecCCCc
Confidence 44453 43 44433210 1345677777764 4444322 5789999876432
Q ss_pred EEE--eecCccccceEEEcCCCCEEEEEecce-eEEeecCCCCceeEEec---cCCCCC-CceE-ECCC-CCEEEEEecC
Q 018705 182 TTV--LHEGFYFANGIALSKNEDFVVVCESWK-RYWLKGDRAGILDAFIE---NLPGGP-DNIN-LAPD-GSFWIGLIKM 252 (351)
Q Consensus 182 ~~~--~~~~~~~~ngi~~~~dg~~lyv~~~~~-~~~i~~~~~~~~~~~~~---~~~g~p-d~i~-~d~~-G~lwva~~~~ 252 (351)
... ......++.++.+++||+++|++.... ++.+-+...++.....+ ..| .| .|.. ++++ |.+|++...+
T Consensus 332 ~~~v~~i~~~~~~~d~~~~pdgr~~~va~~~sn~V~ViD~~t~kl~~~i~vgg~~P-hpg~g~~~~~p~~g~v~~t~~~g 410 (567)
T 1qks_A 332 NLKTTEISAERFLHDGGLDGSHRYFITAANARNKLVVIDTKEGKLVAIEDTGGQTP-HPGRGANFVHPTFGPVWATSHMG 410 (567)
T ss_dssp EEEEEEEECCSSEEEEEECTTSCEEEEEEGGGTEEEEEETTTTEEEEEEECSSSSB-CCTTCEEEEETTTEEEEEEEBSS
T ss_pred cceeeeeeccccccCceECCCCCEEEEEeCCCCeEEEEECCCCcEEEEEeccCcCC-CCccceeeECCCCCcEEEeCCCC
Confidence 111 123345788999999999999987554 54444433344322221 112 22 3554 4666 6799876431
Q ss_pred CchhhhhhhcChhHHHHHHhccchhhcccCCCCCCceEEEEEECCC-------CeEEEEEECCCCCcccceeEEEEECCE
Q 018705 253 NQTGVRAIQKCREKWELLDAYPGLISLLLPMGSDAGARVVKVDGND-------GKIIRDFNDPDATYISFVTSAAEFDGN 325 (351)
Q Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-------g~~~~~~~~~~g~~~~~~~~~~~~~g~ 325 (351)
.+.|..||... -+++..+....+. ......-.++.+
T Consensus 411 -----------------------------------~~~Vsvid~~~~~~~~~~~kvv~~i~~~g~g--~~~i~~~p~~~~ 453 (567)
T 1qks_A 411 -----------------------------------DDSVALIGTDPEGHPDNAWKILDSFPALGGG--SLFIKTHPNSQY 453 (567)
T ss_dssp -----------------------------------SSEEEEEECCTTTCTTTBTSEEEEEECSCSC--CCCEECCTTCSE
T ss_pred -----------------------------------CCeEEEecCCCCCCccccCEEEEEEecCCCC--CEEEEeCCCCCe
Confidence 12467777622 4677777653211 111111123468
Q ss_pred EEEEecC------CCeEEEEeCCCC
Q 018705 326 LYLASLQ------SNFIGILPLDGP 344 (351)
Q Consensus 326 L~ig~~~------~~~i~~~~~~~~ 344 (351)
||+.+.. ++.|.+|++.+.
T Consensus 454 l~v~~~~~~~~~~~~~v~v~d~~~~ 478 (567)
T 1qks_A 454 LYVDATLNPEAEISGSVAVFDIKAM 478 (567)
T ss_dssp EEEECTTCSSHHHHTCEEEEEGGGC
T ss_pred EEEecCCCCCcccCceEEEEECCcc
Confidence 9998843 348999998765
No 126
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=98.97 E-value=6.5e-07 Score=82.91 Aligned_cols=237 Identities=11% Similarity=0.052 Sum_probs=143.7
Q ss_pred CCCceEEEeeC----C---CeEEEEEcCCEEEEEEcCCCe------EEEEeec-----CCccccceEEc----CCCCE-E
Q 018705 52 NHPEDVSVVVS----K---GALYTATRDGWVKYFILHNET------LVNWKHI-----DSQSLLGLTTT----KDGGV-I 108 (351)
Q Consensus 52 ~~pe~i~~d~~----~---g~lyv~~~~g~I~~~d~~~g~------~~~~~~~-----~~~p~~gl~~d----~~G~L-~ 108 (351)
....++++.++ + ..++++..+|.|..|+..+++ ...+... ..... .+++. ++++. +
T Consensus 63 ~~v~~~~~~~~~~~~g~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~-~~~~~~~~~~~~~~~l 141 (397)
T 1sq9_A 63 SGLHHVDVLQAIERDAFELCLVATTSFSGDLLFYRITREDETKKVIFEKLDLLDSDMKKHSFW-ALKWGASNDRLLSHRL 141 (397)
T ss_dssp TCEEEEEEEEEEETTTEEEEEEEEEETTSCEEEEEEEECTTTCCEEEEEECCSCTTGGGSCEE-EEEEECCC----CEEE
T ss_pred CcEEEEEEecccccCCccccEEEEEcCCCCEEEEEccCCcccccccceeecccccccCCCcEE-EEEEeeccCCCCceEE
Confidence 34568899976 5 678888899999999876665 4444333 24556 89999 88976 5
Q ss_pred EEeCCCCeEEE-c-CC------C--eE-----EecC-------CCCCcccEEEccCCcEEEEeCCCccCCcccccccccc
Q 018705 109 LCDNEKGLLKV-T-EE------G--VE-----AIVP-------DASFTNDVIAASDGTLYFTVASTKYTPTDFYKDMAEG 166 (351)
Q Consensus 109 v~d~~~gl~~~-~-~~------g--~~-----~l~~-------~~~~~n~l~~d~dG~ly~t~~~~~~~~~~~~~~~~~~ 166 (351)
++....+.+++ + .. + .. .+.. ....+.+++++++| ++++...
T Consensus 142 ~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~l~~~~~--------------- 205 (397)
T 1sq9_A 142 VATDVKGTTYIWKFHPFADESNSLTLNWSPTLELQGTVESPMTPSQFATSVDISERG-LIATGFN--------------- 205 (397)
T ss_dssp EEEETTSCEEEEEEESSSSHHHHTTTCCCCEEEEEEEECCSSSSCCCCCEEEECTTS-EEEEECT---------------
T ss_pred EEEeCCCcEEEEeCCccccccccceeeccCcceeeeeeccccCCCCCceEEEECCCc-eEEEEeC---------------
Confidence 54434444444 3 24 3 33 4421 22678999999999 6665543
Q ss_pred cCCceEEEEeCCCCeEEEeecC-------ccccceEEEcCCCCEEEEEecc---eeEEeecCCCCc-eeEEecc------
Q 018705 167 KPYGQLRKYDPKLKETTVLHEG-------FYFANGIALSKNEDFVVVCESW---KRYWLKGDRAGI-LDAFIEN------ 229 (351)
Q Consensus 167 ~~~g~l~~~d~~~~~~~~~~~~-------~~~~ngi~~~~dg~~lyv~~~~---~~~~i~~~~~~~-~~~~~~~------ 229 (351)
+|.|..||..+++....... ......++++++++.++++... +.+.+-+...++ ...+...
T Consensus 206 --dg~i~i~d~~~~~~~~~~~~~~~h~~~~~~i~~i~~~~~~~~l~~~~~d~~~g~i~i~d~~~~~~~~~~~~~~~~~~~ 283 (397)
T 1sq9_A 206 --NGTVQISELSTLRPLYNFESQHSMINNSNSIRSVKFSPQGSLLAIAHDSNSFGCITLYETEFGERIGSLSVPTHSSQA 283 (397)
T ss_dssp --TSEEEEEETTTTEEEEEEECCC---CCCCCEEEEEECSSTTEEEEEEEETTEEEEEEEETTTCCEEEEECBC------
T ss_pred --CCcEEEEECCCCceeEEEeccccccccCCccceEEECCCCCEEEEEecCCCCceEEEEECCCCcccceeccCcccccc
Confidence 57899999887765444433 4456789999999988777766 522222211222 2222210
Q ss_pred ------CCCCCCceEECCCCCEEEEEecCCchhhhhhhcChhHHHHHHhccchhhcccCCCCCCceEEEEEECCCCeEEE
Q 018705 230 ------LPGGPDNINLAPDGSFWIGLIKMNQTGVRAIQKCREKWELLDAYPGLISLLLPMGSDAGARVVKVDGNDGKIIR 303 (351)
Q Consensus 230 ------~~g~pd~i~~d~~G~lwva~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~g~~~~ 303 (351)
..+....++++++|++.++... .+.|..+|..+++.+.
T Consensus 284 ~~~~~~~~~~v~~~~~~~~~~~l~~~~~------------------------------------dg~i~iwd~~~~~~~~ 327 (397)
T 1sq9_A 284 SLGEFAHSSWVMSLSFNDSGETLCSAGW------------------------------------DGKLRFWDVKTKERIT 327 (397)
T ss_dssp --CCBSBSSCEEEEEECSSSSEEEEEET------------------------------------TSEEEEEETTTTEEEE
T ss_pred cccccccCCcEEEEEECCCCCEEEEEeC------------------------------------CCeEEEEEcCCCceeE
Confidence 2223456788899987666443 2457777876788888
Q ss_pred EEE------CC-----CCC------cccceeEEEEEC-C----------EEEEEecCCCeEEEEeCCC
Q 018705 304 DFN------DP-----DAT------YISFVTSAAEFD-G----------NLYLASLQSNFIGILPLDG 343 (351)
Q Consensus 304 ~~~------~~-----~g~------~~~~~~~~~~~~-g----------~L~ig~~~~~~i~~~~~~~ 343 (351)
.+. .. .|. ....++++.... + ++++.....+.|..+++++
T Consensus 328 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~l~s~~~dg~i~iw~~~~ 395 (397)
T 1sq9_A 328 TLNMHCDDIEIEEDILAVDEHGDSLAEPGVFDVKFLKKGWRSGMGADLNESLCCVCLDRSIRWFREAG 395 (397)
T ss_dssp EEECCGGGCSSGGGCCCBCTTSCBCSSCCEEEEEEECTTTSBSTTCTTSCEEEEEETTTEEEEEEEEC
T ss_pred EEecccCcccchhhhhccccccccccCCceeEEEeccccccccccccccceEEEecCCCcEEEEEcCC
Confidence 877 22 000 023567777654 3 4555444577888887654
No 127
>3q6k_A 43.2 kDa salivary protein; beta propeller, binding protein, serotonin, salivary gland, binding, ligand binging protein; HET: CIT SRO; 2.52A {Lutzomyia longipalpis} PDB: 3q6p_A* 3q6t_A*
Probab=98.96 E-value=7.3e-07 Score=82.73 Aligned_cols=221 Identities=11% Similarity=0.025 Sum_probs=141.9
Q ss_pred CCCceEEEeeCCCeEEEEEcC------CEEEEEEcC--------CCeE-EEEee--cC---CccccceEEcCCCCEEEEe
Q 018705 52 NHPEDVSVVVSKGALYTATRD------GWVKYFILH--------NETL-VNWKH--ID---SQSLLGLTTTKDGGVILCD 111 (351)
Q Consensus 52 ~~pe~i~~d~~~g~lyv~~~~------g~I~~~d~~--------~g~~-~~~~~--~~---~~p~~gl~~d~~G~L~v~d 111 (351)
..|-++++|..++++|++... -.+..++.. ++++ +.|.. .+ ..++ ++.+|+.|+|||.|
T Consensus 26 ~~P~gv~vd~~~gRiFvt~PR~~~gvp~TL~~v~~~~~~~~~~~~p~ll~PYP~w~~~~~lvsV~-~v~iD~~~rLWVLD 104 (381)
T 3q6k_A 26 MISTAFAYDAEGEKLFLAVPRKLPRVPYTLAEVDTKNSLGVKGKHSPLLNKFSGHKTGKELTSIY-QPVIDDCRRLWVVD 104 (381)
T ss_dssp CCCCEEEEETTTTEEEEECCTTSTTCSCSEEEEEHHHHTTCTTCSSCCBEECTTCSSSCSSSCEE-EEEECTTCEEEEEE
T ss_pred cceeeeeeecCCCcEEEEeCCCCCCCCcEEEEEeCCCCcccccCCcccccCCCCCccccceEEee-EEEEcCCCcEEEEe
Confidence 468899994257899998753 135666642 2355 66532 11 2467 89999999999999
Q ss_pred CCC----------------CeEEEc-C-C--C-eEEecC--C----CCCcccEEEc-c-------CCcEEEEeCCCccCC
Q 018705 112 NEK----------------GLLKVT-E-E--G-VEAIVP--D----ASFTNDVIAA-S-------DGTLYFTVASTKYTP 156 (351)
Q Consensus 112 ~~~----------------gl~~~~-~-~--g-~~~l~~--~----~~~~n~l~~d-~-------dG~ly~t~~~~~~~~ 156 (351)
.+. .|+.++ . + . ++++.- . ..+.+++++| . ++.+|+||..
T Consensus 105 tG~~~~~~~~~~~~~~~~pkLv~~DL~t~~~~li~~y~~p~~~~~~~S~l~di~VD~~~~~~~c~~~~aYItD~~----- 179 (381)
T 3q6k_A 105 IGSVEYRSRGAKDYPSHRPAIVAYDLKQPNYPEVVRYYFPTRLVEKPTYFGGFAVDVANPKGDCSETFVYITNFL----- 179 (381)
T ss_dssp CSSCSSCSTTGGGSCCCCCEEEEEESSSTTCCEEEEEECCGGGCCCGGGEEEEEEEESCTTTTSCSEEEEEEETT-----
T ss_pred CCCcCcCCCccccCCCCCceEEEEECCCCCceeEEEEECCHHhcccCCccceEEEecccCCCCCCccEEEEEcCC-----
Confidence 762 256667 3 5 5 444321 1 1678999999 2 4579999975
Q ss_pred cccccccccccCCceEEEEeCCCCeEEEeec--------------C-----ccccceEEEcCC----CCEEEEEecce--
Q 018705 157 TDFYKDMAEGKPYGQLRKYDPKLKETTVLHE--------------G-----FYFANGIALSKN----EDFVVVCESWK-- 211 (351)
Q Consensus 157 ~~~~~~~~~~~~~g~l~~~d~~~~~~~~~~~--------------~-----~~~~ngi~~~~d----g~~lyv~~~~~-- 211 (351)
.++|..||.++++..++.. + ....+||++||+ ++.||++...+
T Consensus 180 ------------~~gLIVydl~~~~swRv~~~~~~pd~~~~~~i~G~~~~~~~Gi~gIaLsp~~~~~~~~LYf~plss~~ 247 (381)
T 3q6k_A 180 ------------RGALFIYDHKKQDSWNVTHPTFKAERPTKFDYGGKEYEFKAGIFGITLGDRDSEGNRPAYYLAGSAIK 247 (381)
T ss_dssp ------------TTEEEEEETTTTEEEEEECGGGSCCSCEEEEETTEEEEECCCEEEEEECCCCTTSCCEEEEEESSCSE
T ss_pred ------------CCcEEEEECCCCcEEEEccCCCccccCcceEECCEEeEeccCceEEEecCCcCCCCeEEEEEECCCCc
Confidence 3467777777666544431 1 125678999998 78999988766
Q ss_pred eEEee-----cCC-CCceeEEeccCCCCCCc--eEEC-CCCCEEEEEecCCchhhhhhhcChhHHHHHHhccchhhcccC
Q 018705 212 RYWLK-----GDR-AGILDAFIENLPGGPDN--INLA-PDGSFWIGLIKMNQTGVRAIQKCREKWELLDAYPGLISLLLP 282 (351)
Q Consensus 212 ~~~i~-----~~~-~~~~~~~~~~~~g~pd~--i~~d-~~G~lwva~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 282 (351)
-|.+. +.. ...++.+.+ .+...++ +++| ++|+||++...
T Consensus 248 ly~V~T~~L~~~~~~~~v~~~G~-kg~~s~~~~~~~D~~~G~ly~~~~~------------------------------- 295 (381)
T 3q6k_A 248 VYSVNTKELKQKGGKLNPELLGN-RGKYNDAIALAYDPKTKVIFFAEAN------------------------------- 295 (381)
T ss_dssp EEEEEHHHHSSTTCCCCCEEEEE-CCTTCCEEEEEECTTTCEEEEEESS-------------------------------
T ss_pred EEEEEHHHhhCcchhhceEEeee-cCCCCCcceEEEeCCCCeEEEEecc-------------------------------
Confidence 46654 221 223343332 2212454 5776 88999999754
Q ss_pred CCCCCceEEEEEECCCC------eEEEEEECCCCCcccceeEEEEE-CCEEEEEec
Q 018705 283 MGSDAGARVVKVDGNDG------KIIRDFNDPDATYISFVTSAAEF-DGNLYLASL 331 (351)
Q Consensus 283 ~~~~~~~~v~~~~~~~g------~~~~~~~~~~g~~~~~~~~~~~~-~g~L~ig~~ 331 (351)
...|.++++ ++ .....++++ . .-++..+..+ +|+||+.+-
T Consensus 296 -----~~aI~~w~~-~~~~~~~~n~~~l~~d~-~--l~~pd~~~i~~~g~Lwv~sn 342 (381)
T 3q6k_A 296 -----TKQVSCWNT-QKMPLRMKNTDVVYTSS-R--FVFGTDISVDSKGGLWFMSN 342 (381)
T ss_dssp -----SSEEEEEET-TSCSBCGGGEEEEEECT-T--CCSEEEEEECTTSCEEEEEC
T ss_pred -----CCeEEEEeC-CCCccccCceEEEEECC-C--ccccCeEEECCCCeEEEEEC
Confidence 247999999 76 223344665 3 3467777764 789999874
No 128
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=98.94 E-value=4.8e-07 Score=79.63 Aligned_cols=196 Identities=12% Similarity=0.104 Sum_probs=124.4
Q ss_pred CCccccceEEcCCC-CEEE-EeCCCCeEEEcCCC--eEEec-CCCCCcccEEEccCCcEEEEeCCCccCCcccccccccc
Q 018705 92 DSQSLLGLTTTKDG-GVIL-CDNEKGLLKVTEEG--VEAIV-PDASFTNDVIAASDGTLYFTVASTKYTPTDFYKDMAEG 166 (351)
Q Consensus 92 ~~~p~~gl~~d~~G-~L~v-~d~~~gl~~~~~~g--~~~l~-~~~~~~n~l~~d~dG~ly~t~~~~~~~~~~~~~~~~~~ 166 (351)
..++. ||++++++ .||+ .+....+++++.+| .+.+. .+...+.+|+++++|.+|+++..
T Consensus 26 ~~~lS-Gla~~~~~~~L~aV~d~~~~I~~ld~~g~v~~~i~l~g~~D~EGIa~~~~g~~~vs~E~--------------- 89 (255)
T 3qqz_A 26 TNNIS-SLTWSAQSNTLFSTINKPAAIVEMTTNGDLIRTIPLDFVKDLETIEYIGDNQFVISDER--------------- 89 (255)
T ss_dssp CSCEE-EEEEETTTTEEEEEEETTEEEEEEETTCCEEEEEECSSCSSEEEEEECSTTEEEEEETT---------------
T ss_pred ccCcc-eeEEeCCCCEEEEEECCCCeEEEEeCCCCEEEEEecCCCCChHHeEEeCCCEEEEEECC---------------
Confidence 35677 99999864 7997 45555799999767 44443 22367899999999999998754
Q ss_pred cCCceEEEEeCCC-CeEE---EeecCc-ccc-----ceEEEcCCCCEEEEEecce---eEEeecC-CCCceeEEec----
Q 018705 167 KPYGQLRKYDPKL-KETT---VLHEGF-YFA-----NGIALSKNEDFVVVCESWK---RYWLKGD-RAGILDAFIE---- 228 (351)
Q Consensus 167 ~~~g~l~~~d~~~-~~~~---~~~~~~-~~~-----ngi~~~~dg~~lyv~~~~~---~~~i~~~-~~~~~~~~~~---- 228 (351)
.++++.|+... ++.. ...-.+ ..+ .||++++++++||++.... .|.+.+. ......+..+
T Consensus 90 --~~~l~~~~v~~~~~i~~~~~~~~~~~~~~~N~g~EGLA~d~~~~~L~va~E~~p~~i~~~~g~~~~~~l~i~~~~~~~ 167 (255)
T 3qqz_A 90 --DYAIYVISLTPNSEVKILKKIKIPLQESPTNCGFEGLAYSRQDHTFWFFKEKNPIEVYKVNGLLSSNELHISKDKALQ 167 (255)
T ss_dssp --TTEEEEEEECTTCCEEEEEEEECCCSSCCCSSCCEEEEEETTTTEEEEEEESSSEEEEEEESTTCSSCCEEEECHHHH
T ss_pred --CCcEEEEEcCCCCeeeeeeeeccccccccccCCcceEEEeCCCCEEEEEECcCCceEEEEcccccCCceeeecchhhc
Confidence 34677664322 2221 111111 223 6999999998899966543 3444431 1112232211
Q ss_pred -cC-CCCCCceEECCC-CCEEEEEecCCchhhhhhhcChhHHHHHHhccchhhcccCCCCCCceEEEEEECCCCeEEEEE
Q 018705 229 -NL-PGGPDNINLAPD-GSFWIGLIKMNQTGVRAIQKCREKWELLDAYPGLISLLLPMGSDAGARVVKVDGNDGKIIRDF 305 (351)
Q Consensus 229 -~~-~g~pd~i~~d~~-G~lwva~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~g~~~~~~ 305 (351)
.. -.-+.++++|+. |++|+-.... ..++.+|. +|+++..+
T Consensus 168 ~~~~~~d~S~l~~dp~tg~lliLS~~s------------------------------------~~L~~~d~-~g~~~~~~ 210 (255)
T 3qqz_A 168 RQFTLDDVSGAEFNQQKNTLLVLSHES------------------------------------RALQEVTL-VGEVIGEM 210 (255)
T ss_dssp HTCCSSCCCEEEEETTTTEEEEEETTT------------------------------------TEEEEECT-TCCEEEEE
T ss_pred cccccCCceeEEEcCCCCeEEEEECCC------------------------------------CeEEEEcC-CCCEEEEE
Confidence 00 112578899875 5688875432 36999999 99987777
Q ss_pred ECCCCC-----cccceeEEEEE-CCEEEEEecCCCeEEEEeCCC
Q 018705 306 NDPDAT-----YISFVTSAAEF-DGNLYLASLQSNFIGILPLDG 343 (351)
Q Consensus 306 ~~~~g~-----~~~~~~~~~~~-~g~L~ig~~~~~~i~~~~~~~ 343 (351)
.-..|. ...+.-+++.+ +|+|||.+= .|.+++|+..+
T Consensus 211 ~L~~g~~~l~~~~~qpEGia~d~~G~lyIvsE-~n~~y~f~~~~ 253 (255)
T 3qqz_A 211 SLTKGSRGLSHNIKQAEGVAMDASGNIYIVSE-PNRFYRFTPQS 253 (255)
T ss_dssp ECSTTGGGCSSCCCSEEEEEECTTCCEEEEET-TTEEEEEEC--
T ss_pred EcCCccCCcccccCCCCeeEECCCCCEEEEcC-CceEEEEEecC
Confidence 644331 23466777765 589999975 68999997543
No 129
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=98.94 E-value=5.3e-07 Score=85.19 Aligned_cols=160 Identities=11% Similarity=0.056 Sum_probs=101.3
Q ss_pred CEEEEEEcCCCeEEEEeecCCccccceEEcCCCCE-EEEeCCC---CeEEEcC-CC-eEEecCCCCCcccEEEccCCc-E
Q 018705 73 GWVKYFILHNETLVNWKHIDSQSLLGLTTTKDGGV-ILCDNEK---GLLKVTE-EG-VEAIVPDASFTNDVIAASDGT-L 145 (351)
Q Consensus 73 g~I~~~d~~~g~~~~~~~~~~~p~~gl~~d~~G~L-~v~d~~~---gl~~~~~-~g-~~~l~~~~~~~n~l~~d~dG~-l 145 (351)
+.|+.+|.+++..+.+........ .+++.++|+. ..+.... .++.++. +| .+.+......+..++++|||. |
T Consensus 159 ~~i~i~d~~g~~~~~l~~~~~~v~-~~~~Spdg~~la~~s~~~~~~~i~~~d~~tg~~~~l~~~~~~~~~~~~spdg~~l 237 (415)
T 2hqs_A 159 YELRVSDYDGYNQFVVHRSPQPLM-SPAWSPDGSKLAYVTFESGRSALVIQTLANGAVRQVASFPRHNGAPAFSPDGSKL 237 (415)
T ss_dssp EEEEEEETTSCSCEEEEEESSCEE-EEEECTTSSEEEEEECTTSSCEEEEEETTTCCEEEEECCSSCEEEEEECTTSSEE
T ss_pred ceEEEEcCCCCCCEEEeCCCCcce-eeEEcCCCCEEEEEEecCCCcEEEEEECCCCcEEEeecCCCcccCEEEcCCCCEE
Confidence 689999986655666555555666 8999999974 3343332 4555564 56 555544335678899999996 6
Q ss_pred EEEeCCCccCCcccccccccccCCceEEEEeCCCCeEEEeecCccccceEEEcCCCCEEEEEecc-e--eEEeecCCCCc
Q 018705 146 YFTVASTKYTPTDFYKDMAEGKPYGQLRKYDPKLKETTVLHEGFYFANGIALSKNEDFVVVCESW-K--RYWLKGDRAGI 222 (351)
Q Consensus 146 y~t~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~~~~~~~~~~~~~~ngi~~~~dg~~lyv~~~~-~--~~~i~~~~~~~ 222 (351)
+++.+. .....|+.||..+++.+.+.........++++|||+.|+++... + ++++-+...++
T Consensus 238 a~~~~~---------------~g~~~i~~~d~~~~~~~~l~~~~~~~~~~~~spdg~~l~~~s~~~g~~~i~~~d~~~~~ 302 (415)
T 2hqs_A 238 AFALSK---------------TGSLNLYVMDLASGQIRQVTDGRSNNTEPTWFPDSQNLAFTSDQAGRPQVYKVNINGGA 302 (415)
T ss_dssp EEEECT---------------TSSCEEEEEETTTCCEEECCCCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTSSC
T ss_pred EEEEec---------------CCCceEEEEECCCCCEEeCcCCCCcccceEECCCCCEEEEEECCCCCcEEEEEECCCCC
Confidence 656542 11346999999888876665544456789999999988876643 3 55554333333
Q ss_pred eeEEeccCCCCCCceEECCCCCEEEEE
Q 018705 223 LDAFIENLPGGPDNINLAPDGSFWIGL 249 (351)
Q Consensus 223 ~~~~~~~~~g~pd~i~~d~~G~lwva~ 249 (351)
...+.. .......++++++|++.+..
T Consensus 303 ~~~l~~-~~~~~~~~~~spdG~~l~~~ 328 (415)
T 2hqs_A 303 PQRITW-EGSQNQDADVSSDGKFMVMV 328 (415)
T ss_dssp CEECCC-SSSEEEEEEECTTSSEEEEE
T ss_pred EEEEec-CCCcccCeEECCCCCEEEEE
Confidence 333221 11223457889999855443
No 130
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=98.94 E-value=9.8e-07 Score=81.98 Aligned_cols=230 Identities=10% Similarity=0.013 Sum_probs=138.4
Q ss_pred CCceEEEeeCCCeEEEEEcCCEEEEEEcCCCeEEEEeecCCccccceEEcCCCCEEEEeCCCCeEEE-cC-CC--eEEec
Q 018705 53 HPEDVSVVVSKGALYTATRDGWVKYFILHNETLVNWKHIDSQSLLGLTTTKDGGVILCDNEKGLLKV-TE-EG--VEAIV 128 (351)
Q Consensus 53 ~pe~i~~d~~~g~lyv~~~~g~I~~~d~~~g~~~~~~~~~~~p~~gl~~d~~G~L~v~d~~~gl~~~-~~-~g--~~~l~ 128 (351)
...++++++++..++++..+|.|..|+........+........ .+++.++|+.+++....+.+++ +. ++ ...+.
T Consensus 110 ~v~~~~~s~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~v~-~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~ 188 (425)
T 1r5m_A 110 QVTCLAWSHDGNSIVTGVENGELRLWNKTGALLNVLNFHRAPIV-SVKWNKDGTHIISMDVENVTILWNVISGTVMQHFE 188 (425)
T ss_dssp CEEEEEECTTSSEEEEEETTSCEEEEETTSCEEEEECCCCSCEE-EEEECTTSSEEEEEETTCCEEEEETTTTEEEEEEC
T ss_pred ceEEEEEcCCCCEEEEEeCCCeEEEEeCCCCeeeeccCCCccEE-EEEECCCCCEEEEEecCCeEEEEECCCCcEEEEee
Confidence 45688999877788999999999999953333444443445566 8999999975544434444444 43 55 34433
Q ss_pred CCCCC---------------cccEEEccCCcEEEEeCCCccCCcccccccccccCCceEEEEeCCCCeEEEee-cCcccc
Q 018705 129 PDASF---------------TNDVIAASDGTLYFTVASTKYTPTDFYKDMAEGKPYGQLRKYDPKLKETTVLH-EGFYFA 192 (351)
Q Consensus 129 ~~~~~---------------~n~l~~d~dG~ly~t~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~~~~~~~~-~~~~~~ 192 (351)
..... +.++++.+++.+++... .|.|..||..+++..... ......
T Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------------~g~i~~~d~~~~~~~~~~~~~~~~i 250 (425)
T 1r5m_A 189 LKETGGSSINAENHSGDGSLGVDVEWVDDDKFVIPGP------------------KGAIFVYQITEKTPTGKLIGHHGPI 250 (425)
T ss_dssp CC---------------CCCBSCCEEEETTEEEEECG------------------GGCEEEEETTCSSCSEEECCCSSCE
T ss_pred ccccCccceeeccccCCcceeeEEEEcCCCEEEEEcC------------------CCeEEEEEcCCCceeeeeccCCCce
Confidence 22222 77888888876555432 467999998766543222 223446
Q ss_pred ceEEEcCCCCEEEEEecceeEEeecCCCCc-eeEEeccCCCCCCceEECCCCCEEEEEecCCchhhhhhhcChhHHHHHH
Q 018705 193 NGIALSKNEDFVVVCESWKRYWLKGDRAGI-LDAFIENLPGGPDNINLAPDGSFWIGLIKMNQTGVRAIQKCREKWELLD 271 (351)
Q Consensus 193 ngi~~~~dg~~lyv~~~~~~~~i~~~~~~~-~~~~~~~~~g~pd~i~~d~~G~lwva~~~~~~~~~~~~~~~~~~~~~~~ 271 (351)
..++++++++.++.+..++.+.+-+...++ ...+. ...+....+.+.++| ++++...
T Consensus 251 ~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~-~~~~~i~~~~~~~~~-~l~~~~~-------------------- 308 (425)
T 1r5m_A 251 SVLEFNDTNKLLLSASDDGTLRIWHGGNGNSQNCFY-GHSQSIVSASWVGDD-KVISCSM-------------------- 308 (425)
T ss_dssp EEEEEETTTTEEEEEETTSCEEEECSSSBSCSEEEC-CCSSCEEEEEEETTT-EEEEEET--------------------
T ss_pred EEEEECCCCCEEEEEcCCCEEEEEECCCCccceEec-CCCccEEEEEECCCC-EEEEEeC--------------------
Confidence 789999999977777766622222222222 22222 222334567888888 4444332
Q ss_pred hccchhhcccCCCCCCceEEEEEECCCCeEEEEEECCCCCcccceeEEEEE--CCEEEEEecCCCeEEEEeCCCC
Q 018705 272 AYPGLISLLLPMGSDAGARVVKVDGNDGKIIRDFNDPDATYISFVTSAAEF--DGNLYLASLQSNFIGILPLDGP 344 (351)
Q Consensus 272 ~~~~~~~~~~~~~~~~~~~v~~~~~~~g~~~~~~~~~~g~~~~~~~~~~~~--~g~L~ig~~~~~~i~~~~~~~~ 344 (351)
.+.+..+|..+++.+..+..+.+ .++.+... +..|..++. .+.|..+++...
T Consensus 309 ----------------d~~i~i~d~~~~~~~~~~~~~~~----~i~~~~~s~~~~~l~~~~~-dg~i~i~~~~~~ 362 (425)
T 1r5m_A 309 ----------------DGSVRLWSLKQNTLLALSIVDGV----PIFAGRISQDGQKYAVAFM-DGQVNVYDLKKL 362 (425)
T ss_dssp ----------------TSEEEEEETTTTEEEEEEECTTC----CEEEEEECTTSSEEEEEET-TSCEEEEECHHH
T ss_pred ----------------CCcEEEEECCCCcEeEecccCCc----cEEEEEEcCCCCEEEEEEC-CCeEEEEECCCC
Confidence 23577788757787777765433 45666654 344555554 667888887643
No 131
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=98.94 E-value=5.1e-07 Score=84.24 Aligned_cols=224 Identities=15% Similarity=0.125 Sum_probs=133.1
Q ss_pred eEecCCCcCCCceEEEeeCCCeEEEEE----------cCCEEEEEEcCCCeEEE-Eeec-------CCccccceEEcCCC
Q 018705 44 TKLGEGCVNHPEDVSVVVSKGALYTAT----------RDGWVKYFILHNETLVN-WKHI-------DSQSLLGLTTTKDG 105 (351)
Q Consensus 44 ~~i~~~~~~~pe~i~~d~~~g~lyv~~----------~~g~I~~~d~~~g~~~~-~~~~-------~~~p~~gl~~d~~G 105 (351)
..+..| ..|. ++++|++..+|++. .++.|..||..+++... +.-. +..|. ++++++||
T Consensus 73 ~~I~vG--~~P~-va~spDG~~lyVan~~~~r~~~G~~~~~VsviD~~t~~v~~~I~v~~g~r~~~g~~P~-~~a~spDG 148 (386)
T 3sjl_D 73 GMIDGG--FLPN-PVVADDGSFIAHASTVFSRIARGERTDYVEVFDPVTLLPTADIELPDAPRFLVGTYPW-MTSLTPDG 148 (386)
T ss_dssp EEEEEC--SSCE-EEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCEEEEEEETTCCCCCBSCCGG-GEEECTTS
T ss_pred EEEECC--CCCc-EEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCeEEEEEECCCccccccCCCCc-eEEEcCCC
Confidence 345555 4575 99999888999976 25679999998887643 3221 23799 99999999
Q ss_pred C-EEEEeC--CCCeEEEcC-CC--eEEecCCC---CCccc----EEEccCCcE-EEEeCC-Ccc--------CCccc-cc
Q 018705 106 G-VILCDN--EKGLLKVTE-EG--VEAIVPDA---SFTND----VIAASDGTL-YFTVAS-TKY--------TPTDF-YK 161 (351)
Q Consensus 106 ~-L~v~d~--~~gl~~~~~-~g--~~~l~~~~---~~~n~----l~~d~dG~l-y~t~~~-~~~--------~~~~~-~~ 161 (351)
+ |||++. .+.+..++. ++ +..+.... ..|.+ +++.+||.+ |++... .+. ..... .+
T Consensus 149 k~lyVan~~~~~~VsVID~~t~~vv~tI~v~g~~~~~P~g~~~~~~~~~DG~~~~v~~~~~g~v~~~~~~~~~~~~~~~~ 228 (386)
T 3sjl_D 149 KTLLFYQFSPAPAVGVVDLEGKAFKRMLDVPDCYHIFPTAPDTFFMHCRDGSLAKVAFGTEGTPEITHTEVFHPEDEFLI 228 (386)
T ss_dssp SEEEEEECSSSCEEEEEETTTTEEEEEEECCSEEEEEEEETTEEEEEETTSCEEEEECCSSSCCEEEECCCCSCTTSCBC
T ss_pred CEEEEEEcCCCCeEEEEECCCCcEEEEEECCCcceeecCCCceeEEECCCCCEEEEECCCCCeEEEeecceecccccccc
Confidence 4 899975 345667774 55 44443221 22333 377788864 444322 121 00000 00
Q ss_pred ----------ccccccCCceEEEEeCCCCeEEEeec----------Cccccce---EEEcCCCCEEEEEec---------
Q 018705 162 ----------DMAEGKPYGQLRKYDPKLKETTVLHE----------GFYFANG---IALSKNEDFVVVCES--------- 209 (351)
Q Consensus 162 ----------~~~~~~~~g~l~~~d~~~~~~~~~~~----------~~~~~ng---i~~~~dg~~lyv~~~--------- 209 (351)
.++.-...|.|+.+|..++..+.... ....|.| ++++++++++|++..
T Consensus 229 ~~~~~~~~dG~~~~vs~~g~V~v~d~~~~~~~v~~~~~~~~~~~~~~g~~p~g~q~~a~~~~~~~lyV~~~~~~~~~hk~ 308 (386)
T 3sjl_D 229 NHPAYSQKAGRLVWPTYTGKIHQIDLSSGDAKFLPAVEALTEAERADGWRPGGWQQVAYHRALDRIYLLVDQRDEWRHKT 308 (386)
T ss_dssp SCCEEETTTTEEEEEBTTSEEEEEECTTSSCEECCCEESSCHHHHHTTEEECSSSCEEEETTTTEEEEEEEECCTTCTTS
T ss_pred ccceeEcCCCcEEEEeCCCEEEEEECCCCcceeecceeccccccccccccCCCcceeeECCCCCeEEEEeccccccccCC
Confidence 01111123566777765544332211 1112434 889999999999753
Q ss_pred -ceeEEeecCCCCceeEEeccCCCCCCceEECCCCC--EEEEEecCCchhhhhhhcChhHHHHHHhccchhhcccCCCCC
Q 018705 210 -WKRYWLKGDRAGILDAFIENLPGGPDNINLAPDGS--FWIGLIKMNQTGVRAIQKCREKWELLDAYPGLISLLLPMGSD 286 (351)
Q Consensus 210 -~~~~~i~~~~~~~~~~~~~~~~g~pd~i~~d~~G~--lwva~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 286 (351)
.+++|+-+.+.++..... .+...|.++++++||+ ||++...
T Consensus 309 ~~~~V~viD~~t~kv~~~i-~vg~~~~~lavs~D~~~~ly~tn~~----------------------------------- 352 (386)
T 3sjl_D 309 ASRFVVVLDAKTGERLAKF-EMGHEIDSINVSQDEKPLLYALSTG----------------------------------- 352 (386)
T ss_dssp CEEEEEEEETTTCCEEEEE-EEEEEECEEEECSSSSCEEEEEETT-----------------------------------
T ss_pred CCCEEEEEECCCCeEEEEE-ECCCCcceEEECCCCCeEEEEEcCC-----------------------------------
Confidence 126776655444432222 1223478999999996 5555422
Q ss_pred CceEEEEEECCCCeEEEEEECC
Q 018705 287 AGARVVKVDGNDGKIIRDFNDP 308 (351)
Q Consensus 287 ~~~~v~~~~~~~g~~~~~~~~~ 308 (351)
.+.|..||.++++++.++..+
T Consensus 353 -~~~VsViD~~t~k~~~~i~~~ 373 (386)
T 3sjl_D 353 -DKTLYIHDAESGEELRSVNQL 373 (386)
T ss_dssp -TTEEEEEETTTCCEEEEECCC
T ss_pred -CCeEEEEECCCCcEEEEecCC
Confidence 136889999899999998654
No 132
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=98.94 E-value=6.7e-07 Score=83.55 Aligned_cols=228 Identities=10% Similarity=0.083 Sum_probs=141.5
Q ss_pred EEeeCCCeEEEEEcCCEEEEEEcCCCeEEEEe-ecCCccccceEEcCCCCEEEEeCCCCeEEEc--CCC--eEEecCCCC
Q 018705 58 SVVVSKGALYTATRDGWVKYFILHNETLVNWK-HIDSQSLLGLTTTKDGGVILCDNEKGLLKVT--EEG--VEAIVPDAS 132 (351)
Q Consensus 58 ~~d~~~g~lyv~~~~g~I~~~d~~~g~~~~~~-~~~~~p~~gl~~d~~G~L~v~d~~~gl~~~~--~~g--~~~l~~~~~ 132 (351)
++.+++..+.++..+|.|..||..+++..... ....... .++++++|+++++....+.+++. .++ ...+.....
T Consensus 104 ~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~h~~~v~-~~~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~h~~ 182 (420)
T 3vl1_A 104 TAKLQMRRFILGTTEGDIKVLDSNFNLQREIDQAHVSEIT-KLKFFPSGEALISSSQDMQLKIWSVKDGSNPRTLIGHRA 182 (420)
T ss_dssp EECSSSCEEEEEETTSCEEEECTTSCEEEEETTSSSSCEE-EEEECTTSSEEEEEETTSEEEEEETTTCCCCEEEECCSS
T ss_pred EEecCCCEEEEEECCCCEEEEeCCCcceeeecccccCccE-EEEECCCCCEEEEEeCCCeEEEEeCCCCcCceEEcCCCC
Confidence 55656678888999999999998777665442 3334556 89999999866665555656655 344 555554446
Q ss_pred CcccEEEccCCcEEEEeCCCccCCcccccccccccCCceEEEEeCCCCeEEEeecC------------------------
Q 018705 133 FTNDVIAASDGTLYFTVASTKYTPTDFYKDMAEGKPYGQLRKYDPKLKETTVLHEG------------------------ 188 (351)
Q Consensus 133 ~~n~l~~d~dG~ly~t~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~~~~~~~~~~------------------------ 188 (351)
.+.+++++++|...++.+. ++.|..||..+++.......
T Consensus 183 ~v~~~~~~~~~~~l~s~~~-----------------d~~v~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~ 245 (420)
T 3vl1_A 183 TVTDIAIIDRGRNVLSASL-----------------DGTIRLWECGTGTTIHTFNRKENPHDGVNSIALFVGTDRQLHEI 245 (420)
T ss_dssp CEEEEEEETTTTEEEEEET-----------------TSCEEEEETTTTEEEEEECBTTBTTCCEEEEEEEECCCSSCGGG
T ss_pred cEEEEEEcCCCCEEEEEcC-----------------CCcEEEeECCCCceeEEeecCCCCCCCccEEEEecCCcceeeec
Confidence 7899999999987766543 45688888776665433321
Q ss_pred -ccccceEEEcCCCCEEEEEecce--eEEeecCCCCce-eEEeccCCCCCCceEECCCCC-EEEEEecCCchhhhhhhcC
Q 018705 189 -FYFANGIALSKNEDFVVVCESWK--RYWLKGDRAGIL-DAFIENLPGGPDNINLAPDGS-FWIGLIKMNQTGVRAIQKC 263 (351)
Q Consensus 189 -~~~~ngi~~~~dg~~lyv~~~~~--~~~i~~~~~~~~-~~~~~~~~g~pd~i~~d~~G~-lwva~~~~~~~~~~~~~~~ 263 (351)
......++++++++.++.+..++ ++| +...++. ..+.....+....++++++|. +.++...
T Consensus 246 ~~~~v~~~~~s~~~~~l~~~~~dg~i~i~--d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~g~~------------ 311 (420)
T 3vl1_A 246 STSKKNNLEFGTYGKYVIAGHVSGVITVH--NVFSKEQTIQLPSKFTCSCNSLTVDGNNANYIYAGYE------------ 311 (420)
T ss_dssp CCCCCCTTCSSCTTEEEEEEETTSCEEEE--ETTTCCEEEEECCTTSSCEEEEEECSSCTTEEEEEET------------
T ss_pred ccCcccceEEcCCCCEEEEEcCCCeEEEE--ECCCCceeEEcccccCCCceeEEEeCCCCCEEEEEeC------------
Confidence 12234567789998777776666 444 2222222 222212222345678899997 5555432
Q ss_pred hhHHHHHHhccchhhcccCCCCCCceEEEEEECCCC-eEEEEEECCCCCcccceeEEEEECCEEEEEecCCCeEEEEeCC
Q 018705 264 REKWELLDAYPGLISLLLPMGSDAGARVVKVDGNDG-KIIRDFNDPDATYISFVTSAAEFDGNLYLASLQSNFIGILPLD 342 (351)
Q Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~g-~~~~~~~~~~g~~~~~~~~~~~~~g~L~ig~~~~~~i~~~~~~ 342 (351)
.+.|..+|..++ +.+..+....+ ..++.+...++++++.....+.|..+++.
T Consensus 312 ------------------------dg~i~vwd~~~~~~~~~~~~~~~~---~~v~~~~~~~~~~l~s~~~d~~v~iw~~~ 364 (420)
T 3vl1_A 312 ------------------------NGMLAQWDLRSPECPVGEFLINEG---TPINNVYFAAGALFVSSGFDTSIKLDIIS 364 (420)
T ss_dssp ------------------------TSEEEEEETTCTTSCSEEEEESTT---SCEEEEEEETTEEEEEETTTEEEEEEEEC
T ss_pred ------------------------CCeEEEEEcCCCcCchhhhhccCC---CCceEEEeCCCCEEEEecCCccEEEEecc
Confidence 245777777444 33455544222 24566666677766666657778888876
Q ss_pred CC
Q 018705 343 GP 344 (351)
Q Consensus 343 ~~ 344 (351)
..
T Consensus 365 ~~ 366 (420)
T 3vl1_A 365 DP 366 (420)
T ss_dssp CT
T ss_pred CC
Confidence 63
No 133
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=98.93 E-value=2.5e-06 Score=77.60 Aligned_cols=187 Identities=11% Similarity=0.081 Sum_probs=112.7
Q ss_pred CCcCCCceEEEeeCCCeEEEEEcCCEEEEEEcCCCeEE-EEeecCCccccceEEcCCCCEEEEeCCCCeEEEc--CCC--
Q 018705 49 GCVNHPEDVSVVVSKGALYTATRDGWVKYFILHNETLV-NWKHIDSQSLLGLTTTKDGGVILCDNEKGLLKVT--EEG-- 123 (351)
Q Consensus 49 ~~~~~pe~i~~d~~~g~lyv~~~~g~I~~~d~~~g~~~-~~~~~~~~p~~gl~~d~~G~L~v~d~~~gl~~~~--~~g-- 123 (351)
+.-....++++++++..++++..+|.|..||..+++.. .+........ .++++++|+++++....+.+++. .++
T Consensus 30 ~h~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~h~~~v~-~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~ 108 (369)
T 3zwl_B 30 GHERPLTQVKYNKEGDLLFSCSKDSSASVWYSLNGERLGTLDGHTGTIW-SIDVDCFTKYCVTGSADYSIKLWDVSNGQC 108 (369)
T ss_dssp CCSSCEEEEEECTTSCEEEEEESSSCEEEEETTTCCEEEEECCCSSCEE-EEEECTTSSEEEEEETTTEEEEEETTTCCE
T ss_pred EeeceEEEEEEcCCCCEEEEEeCCCEEEEEeCCCchhhhhhhhcCCcEE-EEEEcCCCCEEEEEeCCCeEEEEECCCCcE
Confidence 33345678999987778899999999999998777653 3333344556 89999999877665556655555 345
Q ss_pred eEEecCCCCCcccEEEccCCcEEEEeCCCccCCcccccccccccCCceEEEEeCCCCe------------EEEeec--Cc
Q 018705 124 VEAIVPDASFTNDVIAASDGTLYFTVASTKYTPTDFYKDMAEGKPYGQLRKYDPKLKE------------TTVLHE--GF 189 (351)
Q Consensus 124 ~~~l~~~~~~~n~l~~d~dG~ly~t~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~~~------------~~~~~~--~~ 189 (351)
...+. ....+..++++++|..+++..... ....|.|..||..++. ...+.. ..
T Consensus 109 ~~~~~-~~~~v~~~~~~~~~~~l~~~~~~~------------~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (369)
T 3zwl_B 109 VATWK-SPVPVKRVEFSPCGNYFLAILDNV------------MKNPGSINIYEIERDSATHELTKVSEEPIHKIITHEGL 175 (369)
T ss_dssp EEEEE-CSSCEEEEEECTTSSEEEEEECCB------------TTBCCEEEEEEEEECTTTCCEEEECSSCSEEEECCTTC
T ss_pred EEEee-cCCCeEEEEEccCCCEEEEecCCc------------cCCCCEEEEEEecCCccceeecccccceeeeccCCcCc
Confidence 44444 236788999999997666543210 0112456666543221 111111 11
Q ss_pred cccceEEEcCCCCEEEEEecceeEEeecCCC-Cc-eeEEeccCCCCCCceEECCCCCEEEEEe
Q 018705 190 YFANGIALSKNEDFVVVCESWKRYWLKGDRA-GI-LDAFIENLPGGPDNINLAPDGSFWIGLI 250 (351)
Q Consensus 190 ~~~ngi~~~~dg~~lyv~~~~~~~~i~~~~~-~~-~~~~~~~~~g~pd~i~~d~~G~lwva~~ 250 (351)
.....++++++++.++++...+.+.+-+... .. ...+. ...+....++++++|++.++..
T Consensus 176 ~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~ 237 (369)
T 3zwl_B 176 DAATVAGWSTKGKYIIAGHKDGKISKYDVSNNYEYVDSID-LHEKSISDMQFSPDLTYFITSS 237 (369)
T ss_dssp CCEEEEEECGGGCEEEEEETTSEEEEEETTTTTEEEEEEE-CCSSCEEEEEECTTSSEEEEEE
T ss_pred cceeEEEEcCCCCEEEEEcCCCEEEEEECCCCcEeEEEEe-cCCCceeEEEECCCCCEEEEec
Confidence 2567899999999887777666322222222 22 22222 2223345678999998666543
No 134
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=98.93 E-value=5.7e-06 Score=75.51 Aligned_cols=182 Identities=13% Similarity=0.135 Sum_probs=115.3
Q ss_pred CCCcCCCceEEEeeCCCeEEEEEcCCEEEEEEcCCCeEE-EEeecCCccccceEEcCCCCEEEEeCCCCeEEEcC--C--
Q 018705 48 EGCVNHPEDVSVVVSKGALYTATRDGWVKYFILHNETLV-NWKHIDSQSLLGLTTTKDGGVILCDNEKGLLKVTE--E-- 122 (351)
Q Consensus 48 ~~~~~~pe~i~~d~~~g~lyv~~~~g~I~~~d~~~g~~~-~~~~~~~~p~~gl~~d~~G~L~v~d~~~gl~~~~~--~-- 122 (351)
.+....-.++++++++..+.++..||.|..||..+++.. .+........ .+++.++|+++++....+.+++.. .
T Consensus 52 ~gH~~~v~~~~~s~d~~~l~s~s~Dg~v~iWd~~~~~~~~~~~~~~~~v~-~~~~s~~~~~l~s~~~d~~v~iw~~~~~~ 130 (340)
T 1got_B 52 RGHLAKIYAMHWGTDSRLLLSASQDGKLIIWDSYTTNKVHAIPLRSSWVM-TCAYAPSGNYVACGGLDNICSIYNLKTRE 130 (340)
T ss_dssp CCCSSCEEEEEECTTSSEEEEEETTTEEEEEETTTCCEEEEEECSSSCEE-EEEECTTSSEEEEEETTCEEEEEETTTCS
T ss_pred cCCCCceEEEEECCCCCEEEEEeCCCcEEEEECCCCCcceEeecCCccEE-EEEECCCCCEEEEEeCCCeEEEEECccCC
Confidence 343445568999977778899999999999998776543 3333334456 899999998777665666666652 2
Q ss_pred C-eE---EecCCCCCcccEEEccCCcEEEEeCCCccCCcccccccccccCCceEEEEeCCCCeEEEeec-CccccceEEE
Q 018705 123 G-VE---AIVPDASFTNDVIAASDGTLYFTVASTKYTPTDFYKDMAEGKPYGQLRKYDPKLKETTVLHE-GFYFANGIAL 197 (351)
Q Consensus 123 g-~~---~l~~~~~~~n~l~~d~dG~ly~t~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~~~~~~~~~-~~~~~ngi~~ 197 (351)
+ .+ .+......+..+.+.+++.+..+. . ++.|..||..+++...... .......+++
T Consensus 131 ~~~~~~~~~~~h~~~v~~~~~~~~~~l~s~s-~-----------------d~~i~~wd~~~~~~~~~~~~h~~~v~~~~~ 192 (340)
T 1got_B 131 GNVRVSRELAGHTGYLSCCRFLDDNQIVTSS-G-----------------DTTCALWDIETGQQTTTFTGHTGDVMSLSL 192 (340)
T ss_dssp BSCEEEEEEECCSSCEEEEEEEETTEEEEEE-T-----------------TSCEEEEETTTTEEEEEECCCSSCEEEEEE
T ss_pred CcceeEEEecCCCccEEEEEECCCCcEEEEE-C-----------------CCcEEEEECCCCcEEEEEcCCCCceEEEEE
Confidence 2 22 222223566777777777654332 2 4679999988776544333 2345678999
Q ss_pred cCCCCEEEEEecce--eEEeecCCCCce-eEEeccCCCCCCceEECCCCCEEEEEec
Q 018705 198 SKNEDFVVVCESWK--RYWLKGDRAGIL-DAFIENLPGGPDNINLAPDGSFWIGLIK 251 (351)
Q Consensus 198 ~~dg~~lyv~~~~~--~~~i~~~~~~~~-~~~~~~~~g~pd~i~~d~~G~lwva~~~ 251 (351)
+|+++.++.+..++ ++|- ...+.. ..+. ........++++++|++.++...
T Consensus 193 ~~~~~~l~sg~~d~~v~~wd--~~~~~~~~~~~-~h~~~v~~v~~~p~~~~l~s~s~ 246 (340)
T 1got_B 193 APDTRLFVSGACDASAKLWD--VREGMCRQTFT-GHESDINAICFFPNGNAFATGSD 246 (340)
T ss_dssp CTTSSEEEEEETTSCEEEEE--TTTCSEEEEEC-CCSSCEEEEEECTTSSEEEEEET
T ss_pred CCCCCEEEEEeCCCcEEEEE--CCCCeeEEEEc-CCcCCEEEEEEcCCCCEEEEEcC
Confidence 99998666666555 5552 222222 2222 22233456789999987776543
No 135
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=98.93 E-value=7.2e-07 Score=89.67 Aligned_cols=193 Identities=13% Similarity=0.097 Sum_probs=112.3
Q ss_pred CCCceEEEeeCCCeEEEEEcCCEEEEEEcCCCeEEEEeecCCccccceEEcCCCCEEEEeCCCCeEEEc-CC-----C-e
Q 018705 52 NHPEDVSVVVSKGALYTATRDGWVKYFILHNETLVNWKHIDSQSLLGLTTTKDGGVILCDNEKGLLKVT-EE-----G-V 124 (351)
Q Consensus 52 ~~pe~i~~d~~~g~lyv~~~~g~I~~~d~~~g~~~~~~~~~~~p~~gl~~d~~G~L~v~d~~~gl~~~~-~~-----g-~ 124 (351)
..+.+++++|+ +.+.++ .++.|+.+|..+++..........+. .++++++|+.++......++.++ .+ | .
T Consensus 82 ~~v~~~~~spd-~~~~~~-~~~~i~~~d~~~~~~~~l~~~~~~~~-~~~~SpdG~~la~~~~~~i~v~~~~~~~~~~g~~ 158 (706)
T 2z3z_A 82 FPSFRTLDAGR-GLVVLF-TQGGLVGFDMLARKVTYLFDTNEETA-SLDFSPVGDRVAYVRNHNLYIARGGKLGEGMSRA 158 (706)
T ss_dssp CCCEEEEETTT-TEEEEE-ETTEEEEEETTTTEEEEEECCTTCCT-TCEECTTSSEEEEEETTEEEEEECBCTTSCCCCC
T ss_pred cCceeEEECCC-CeEEEE-ECCEEEEEECCCCceEEccCCccccc-CCcCCCCCCEEEEEECCeEEEEecCcccccCCCc
Confidence 35778999976 666555 45899999998888766655455567 89999999754444444566666 36 7 4
Q ss_pred EEecCCC-C--------------CcccEEEccCCc-EEEEeCCCccCCcccc-----------cc---ccc--ccCCceE
Q 018705 125 EAIVPDA-S--------------FTNDVIAASDGT-LYFTVASTKYTPTDFY-----------KD---MAE--GKPYGQL 172 (351)
Q Consensus 125 ~~l~~~~-~--------------~~n~l~~d~dG~-ly~t~~~~~~~~~~~~-----------~~---~~~--~~~~g~l 172 (351)
..+.... . .+.+++++|||+ |+++.... -....+. .. -.. ......|
T Consensus 159 ~~~~~~~~~~~~~g~~~~~ee~~~~~~~~~SpDg~~la~~~~d~-~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l 237 (706)
T 2z3z_A 159 IAVTIDGTETLVYGQAVHQREFGIEKGTFWSPKGSCLAFYRMDQ-SMVKPTPIVDYHPLEAESKPLYYPMAGTPSHHVTV 237 (706)
T ss_dssp EESCSCCBTTEEESSCCGGGCTTCCCSEEECTTSSEEEEEEEEC-TTSCCEEEEECCSSSCEEEEECCCBTTSCCCEEEE
T ss_pred EEeccCCCCCeEcccchhhhhcCCCceEEECCCCCEEEEEEECC-CCCceEEeeccCCCCCceEEeeCCCCCCCCCeeEE
Confidence 4433221 1 158999999996 44443100 0000000 00 000 1123569
Q ss_pred EEEeCCCCeEEEeecC---ccccceEEEcCCCCEEEEEecce-----eEEeecCCCC-ceeEEe-ccCCC---CCCceEE
Q 018705 173 RKYDPKLKETTVLHEG---FYFANGIALSKNEDFVVVCESWK-----RYWLKGDRAG-ILDAFI-ENLPG---GPDNINL 239 (351)
Q Consensus 173 ~~~d~~~~~~~~~~~~---~~~~ngi~~~~dg~~lyv~~~~~-----~~~i~~~~~~-~~~~~~-~~~~g---~pd~i~~ 239 (351)
+.||.++++...+... ...+..++++|||+.|+++..++ .+++-+...+ ....+. ..... ....+.+
T Consensus 238 ~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~ 317 (706)
T 2z3z_A 238 GIYHLATGKTVYLQTGEPKEKFLTNLSWSPDENILYVAEVNRAQNECKVNAYDAETGRFVRTLFVETDKHYVEPLHPLTF 317 (706)
T ss_dssp EEEETTTTEEEECCCCSCTTCEEEEEEECTTSSEEEEEEECTTSCEEEEEEEETTTCCEEEEEEEEECSSCCCCCSCCEE
T ss_pred EEEECCCCceEeeccCCCCceeEeeEEEECCCCEEEEEEeCCCCCeeEEEEEECCCCceeeEEEEccCCCeECccCCcee
Confidence 9999998887655422 23456799999999888865432 3444333334 333222 11111 1256788
Q ss_pred CC--CCCEEEE
Q 018705 240 AP--DGSFWIG 248 (351)
Q Consensus 240 d~--~G~lwva 248 (351)
++ +|++.++
T Consensus 318 sp~~dg~~l~~ 328 (706)
T 2z3z_A 318 LPGSNNQFIWQ 328 (706)
T ss_dssp CTTCSSEEEEE
T ss_pred ecCCCCEEEEE
Confidence 88 8974443
No 136
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=98.92 E-value=1.1e-07 Score=88.58 Aligned_cols=224 Identities=10% Similarity=-0.046 Sum_probs=126.3
Q ss_pred ceEecCCCcCCCceEEEeeCCCeEEEEE----------cCCEEEEEEcCCCeEEEEeecC--------CccccceEEcCC
Q 018705 43 LTKLGEGCVNHPEDVSVVVSKGALYTAT----------RDGWVKYFILHNETLVNWKHID--------SQSLLGLTTTKD 104 (351)
Q Consensus 43 ~~~i~~~~~~~pe~i~~d~~~g~lyv~~----------~~g~I~~~d~~~g~~~~~~~~~--------~~p~~gl~~d~~ 104 (351)
+.++..| ..| +++++|+++.+|++. .++.|..||+.+++...-...+ ..|. ++++++|
T Consensus 59 ~~~i~vG--~~P-~i~~spDg~~lyVan~~~~r~~~G~~~~~VsviD~~T~~vv~~I~v~~~~~~~~g~~P~-~ia~SpD 134 (368)
T 1mda_H 59 LGHSLGA--FLS-LAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPVTFLPIADIELPDAPRFSVGPRVH-IIGNCAS 134 (368)
T ss_dssp EEEEEEC--TTC-EEEECTTSSCEEEEEEEETTTTSSSEEEEEEEECTTTCCEEEEEEETTSCSCCBSCCTT-SEEECTT
T ss_pred EEEEeCC--CCC-ceEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCCEEEEEECCCccccccCCCcc-eEEEcCC
Confidence 3456666 358 999999889999987 3578999999888774332222 4699 9999999
Q ss_pred C-CEEEEeCC-CCeEEE---cCCCeEEecCCC---CCccc----EEEccCCcE-EEEeCC-----CccCCc--------c
Q 018705 105 G-GVILCDNE-KGLLKV---TEEGVEAIVPDA---SFTND----VIAASDGTL-YFTVAS-----TKYTPT--------D 158 (351)
Q Consensus 105 G-~L~v~d~~-~gl~~~---~~~g~~~l~~~~---~~~n~----l~~d~dG~l-y~t~~~-----~~~~~~--------~ 158 (351)
| .|||++.. ...+.+ |......+.... ..|.+ ++..+||.+ ++.... .+.... .
T Consensus 135 Gk~lyVan~~~~~~v~V~~iD~~tv~~i~v~~~~~~~p~g~~~~~~~~~dg~~~~vd~~~~~~~~~~v~~~~t~~i~vg~ 214 (368)
T 1mda_H 135 SACLLFFLFGSSAAAGLSVPGASDDQLTKSASCFHIHPGAAATHYLGSCPASLAASDLAAAPAAAGIVGAQCTGAQNCSS 214 (368)
T ss_dssp SSCEEEEECSSSCEEEEEETTTEEEEEEECSSCCCCEEEETTEEECCCCTTSCEEEECCSSCCCCEECCCCSCTTSCBCS
T ss_pred CCEEEEEccCCCCeEEEEEEchhhceEEECCCceEEccCCCeEEEEEcCCCCEEEEECccccccCCeEEEEeeeeeeCCC
Confidence 9 69999854 343444 431133332110 11111 333445532 222211 010000 0
Q ss_pred ----c--ccccccccCCceEEEEeCCCCeEEEeec----------Cccccce---EEEcCCCCEEEEEec---c------
Q 018705 159 ----F--YKDMAEGKPYGQLRKYDPKLKETTVLHE----------GFYFANG---IALSKNEDFVVVCES---W------ 210 (351)
Q Consensus 159 ----~--~~~~~~~~~~g~l~~~d~~~~~~~~~~~----------~~~~~ng---i~~~~dg~~lyv~~~---~------ 210 (351)
. ...++.-.. +.++.+|..+++.+.... ....|.| +++++|++.+|++.. +
T Consensus 215 ~P~~~~~~~~~~~vs~-~~V~viD~~~~~~~v~~~~~~~~~~~~~~~~~p~g~~~v~~s~dg~~lyV~~~~~~~~~~~~~ 293 (368)
T 1mda_H 215 QAAQANYPGMLVWAVA-SSILQGDIPAAGATMKAAIDGNESGRKADNFRSAGFQMVAKLKNTDGIMILTVEHSRSCLAAA 293 (368)
T ss_dssp CCEEETTTTEEEECBS-SCCEEEECCSSCCEEECCCCSSCTHHHHTTEEECSSSCEEEETTTTEEEEEEEECSSCTTSCE
T ss_pred CccccccCCEEEEEcC-CEEEEEECCCCcceEEEEEEeccccccccccccCcceeeEEcCCCCEEEEEeccccCcccccC
Confidence 0 000111111 567888875443222211 1224566 899999999999753 3
Q ss_pred eeEEeecCCCCceeEEeccCCCCCCceEECCCCC-EEEEEecCCchhhhhhhcChhHHHHHHhccchhhcccCCCCCCce
Q 018705 211 KRYWLKGDRAGILDAFIENLPGGPDNINLAPDGS-FWIGLIKMNQTGVRAIQKCREKWELLDAYPGLISLLLPMGSDAGA 289 (351)
Q Consensus 211 ~~~~i~~~~~~~~~~~~~~~~g~pd~i~~d~~G~-lwva~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 289 (351)
....+-+....+....+ ..+..|.+++++++|+ +|++.... .+
T Consensus 294 ~~~~ViD~~t~~vv~~i-~vg~~p~gi~~s~Dg~~l~va~~~~-----------------------------------~~ 337 (368)
T 1mda_H 294 ENTSSVTASVGQTSGPI-SNGHDSDAIIAAQDGASDNYANSAG-----------------------------------TE 337 (368)
T ss_dssp EEEEEEESSSCCEEECC-EEEEEECEEEECCSSSCEEEEEETT-----------------------------------TT
T ss_pred CCEEEEECCCCeEEEEE-ECCCCcceEEECCCCCEEEEEccCC-----------------------------------CC
Confidence 21122222222221111 1223589999999996 89987621 13
Q ss_pred EEEEEECCCCeEEEEEEC
Q 018705 290 RVVKVDGNDGKIIRDFND 307 (351)
Q Consensus 290 ~v~~~~~~~g~~~~~~~~ 307 (351)
.|..+|.++++++..+..
T Consensus 338 ~VsVID~~t~kvv~~I~v 355 (368)
T 1mda_H 338 VLDIYDAASDQDQSSVEL 355 (368)
T ss_dssp EEEEEESSSCEEEEECCC
T ss_pred eEEEEECCCCcEEEEEEC
Confidence 688999988898888864
No 137
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=98.92 E-value=2.6e-06 Score=77.84 Aligned_cols=223 Identities=13% Similarity=0.068 Sum_probs=138.6
Q ss_pred CceEEEeeCCCeEEEEEcCCEEEEEEcCCCe----E-EEEeecCCccccceEEcCCCCEEEEeCCCCeEEEc--CCC--e
Q 018705 54 PEDVSVVVSKGALYTATRDGWVKYFILHNET----L-VNWKHIDSQSLLGLTTTKDGGVILCDNEKGLLKVT--EEG--V 124 (351)
Q Consensus 54 pe~i~~d~~~g~lyv~~~~g~I~~~d~~~g~----~-~~~~~~~~~p~~gl~~d~~G~L~v~d~~~gl~~~~--~~g--~ 124 (351)
..+++++|++..+.++..++.|..|+..+++ . ..+....+... .+.+.+++.+..+... +.++++ .++ .
T Consensus 100 v~~~~~s~~~~~l~s~~~d~~v~iw~~~~~~~~~~~~~~~~~h~~~v~-~~~~~~~~~l~s~s~d-~~i~~wd~~~~~~~ 177 (340)
T 1got_B 100 VMTCAYAPSGNYVACGGLDNICSIYNLKTREGNVRVSRELAGHTGYLS-CCRFLDDNQIVTSSGD-TTCALWDIETGQQT 177 (340)
T ss_dssp EEEEEECTTSSEEEEEETTCEEEEEETTTCSBSCEEEEEEECCSSCEE-EEEEEETTEEEEEETT-SCEEEEETTTTEEE
T ss_pred EEEEEECCCCCEEEEEeCCCeEEEEECccCCCcceeEEEecCCCccEE-EEEECCCCcEEEEECC-CcEEEEECCCCcEE
Confidence 3477888777888889999999999975542 1 22222334445 7778778877666654 445554 355 4
Q ss_pred EEecCCCCCcccEEEccCCcEEEEeCCCccCCcccccccccccCCceEEEEeCCCCeEEEee-cCccccceEEEcCCCCE
Q 018705 125 EAIVPDASFTNDVIAASDGTLYFTVASTKYTPTDFYKDMAEGKPYGQLRKYDPKLKETTVLH-EGFYFANGIALSKNEDF 203 (351)
Q Consensus 125 ~~l~~~~~~~n~l~~d~dG~ly~t~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~~~~~~~~-~~~~~~ngi~~~~dg~~ 203 (351)
..+......+.++++.|+|.++++.+. ++.|..||..+++..... ......+.++++|+++.
T Consensus 178 ~~~~~h~~~v~~~~~~~~~~~l~sg~~-----------------d~~v~~wd~~~~~~~~~~~~h~~~v~~v~~~p~~~~ 240 (340)
T 1got_B 178 TTFTGHTGDVMSLSLAPDTRLFVSGAC-----------------DASAKLWDVREGMCRQTFTGHESDINAICFFPNGNA 240 (340)
T ss_dssp EEECCCSSCEEEEEECTTSSEEEEEET-----------------TSCEEEEETTTCSEEEEECCCSSCEEEEEECTTSSE
T ss_pred EEEcCCCCceEEEEECCCCCEEEEEeC-----------------CCcEEEEECCCCeeEEEEcCCcCCEEEEEEcCCCCE
Confidence 445444467889999999988877654 567999998776654333 33345788999999997
Q ss_pred EEEEecce--eEEeecCCCCc-eeEEec-cCCCCCCceEECCCCCEEEEEecCCchhhhhhhcChhHHHHHHhccchhhc
Q 018705 204 VVVCESWK--RYWLKGDRAGI-LDAFIE-NLPGGPDNINLAPDGSFWIGLIKMNQTGVRAIQKCREKWELLDAYPGLISL 279 (351)
Q Consensus 204 lyv~~~~~--~~~i~~~~~~~-~~~~~~-~~~g~pd~i~~d~~G~lwva~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 279 (351)
+..+..++ ++|- ...++ ...+.. ........++++++|++.++...
T Consensus 241 l~s~s~d~~v~iwd--~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~---------------------------- 290 (340)
T 1got_B 241 FATGSDDATCRLFD--LRADQELMTYSHDNIICGITSVSFSKSGRLLLAGYD---------------------------- 290 (340)
T ss_dssp EEEEETTSCEEEEE--TTTTEEEEEECCTTCCSCEEEEEECTTSSEEEEEET----------------------------
T ss_pred EEEEcCCCcEEEEE--CCCCcEEEEEccCCcccceEEEEECCCCCEEEEECC----------------------------
Confidence 77776666 5552 12222 122211 11111244688999987776543
Q ss_pred ccCCCCCCceEEEEEECCCCeEEEEEECCCCCcccceeEEEEE-CCE-EEEEecCCCeEEE
Q 018705 280 LLPMGSDAGARVVKVDGNDGKIIRDFNDPDATYISFVTSAAEF-DGN-LYLASLQSNFIGI 338 (351)
Q Consensus 280 ~~~~~~~~~~~v~~~~~~~g~~~~~~~~~~g~~~~~~~~~~~~-~g~-L~ig~~~~~~i~~ 338 (351)
.+.|..+|..+++.+..+..+.+ .++++... +|+ |.-|+. .+.|..
T Consensus 291 --------d~~i~vwd~~~~~~~~~~~~h~~----~v~~~~~s~dg~~l~s~s~-D~~i~i 338 (340)
T 1got_B 291 --------DFNCNVWDALKADRAGVLAGHDN----RVSCLGVTDDGMAVATGSW-DSFLKI 338 (340)
T ss_dssp --------TSEEEEEETTTCCEEEEEECCSS----CEEEEEECTTSSCEEEEET-TSCEEE
T ss_pred --------CCeEEEEEcccCcEeeEeecCCC----cEEEEEEcCCCCEEEEEcC-CccEEe
Confidence 23577778657777777766543 46666654 343 444443 344443
No 138
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=98.91 E-value=6.4e-06 Score=73.84 Aligned_cols=142 Identities=13% Similarity=0.111 Sum_probs=99.1
Q ss_pred CCCceEEEeeCCCeEEEEEcCCEEEEEEcCCCeEE-EEeecCCccccceEEcCCCCEEEEeCCCCeEEEc--CCC--eEE
Q 018705 52 NHPEDVSVVVSKGALYTATRDGWVKYFILHNETLV-NWKHIDSQSLLGLTTTKDGGVILCDNEKGLLKVT--EEG--VEA 126 (351)
Q Consensus 52 ~~pe~i~~d~~~g~lyv~~~~g~I~~~d~~~g~~~-~~~~~~~~p~~gl~~d~~G~L~v~d~~~gl~~~~--~~g--~~~ 126 (351)
....+++++|++..+.++..+|.|..||..+++.. .+........ .+++.++++++++....+.+++. +++ ...
T Consensus 66 ~~v~~~~~~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~v~-~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~ 144 (312)
T 4ery_A 66 LGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVF-CCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKT 144 (312)
T ss_dssp SCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEE-EEEECSSSSEEEEEETTSCEEEEETTTCCEEEE
T ss_pred CceEEEEEcCCCCEEEEECCCCEEEEEECCCCcEEEEEcCCCCCEE-EEEEcCCCCEEEEEeCCCcEEEEECCCCEEEEE
Confidence 34568899987788899999999999998777653 3333334456 88999999877765555655555 345 455
Q ss_pred ecCCCCCcccEEEccCCcEEEEeCCCccCCcccccccccccCCceEEEEeCCCCeEEEe-ec-CccccceEEEcCCCCEE
Q 018705 127 IVPDASFTNDVIAASDGTLYFTVASTKYTPTDFYKDMAEGKPYGQLRKYDPKLKETTVL-HE-GFYFANGIALSKNEDFV 204 (351)
Q Consensus 127 l~~~~~~~n~l~~d~dG~ly~t~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~~~~~~~-~~-~~~~~ngi~~~~dg~~l 204 (351)
+......+..++++++|.++++.+. +|.|..||..+++.... .. .......++++|+++.+
T Consensus 145 ~~~~~~~v~~~~~~~~~~~l~~~~~-----------------d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 207 (312)
T 4ery_A 145 LPAHSDPVSAVHFNRDGSLIVSSSY-----------------DGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYI 207 (312)
T ss_dssp ECCCSSCEEEEEECTTSSEEEEEET-----------------TSCEEEEETTTCCEEEEECCSSCCCEEEEEECTTSSEE
T ss_pred ecCCCCcEEEEEEcCCCCEEEEEeC-----------------CCcEEEEECCCCceeeEEeccCCCceEEEEECCCCCEE
Confidence 5443356788999999987776654 46789999877654332 22 22334678999999977
Q ss_pred EEEecce
Q 018705 205 VVCESWK 211 (351)
Q Consensus 205 yv~~~~~ 211 (351)
+.+..++
T Consensus 208 ~~~~~d~ 214 (312)
T 4ery_A 208 LAATLDN 214 (312)
T ss_dssp EEEETTT
T ss_pred EEEcCCC
Confidence 7776666
No 139
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=98.91 E-value=3.3e-06 Score=75.82 Aligned_cols=179 Identities=13% Similarity=0.082 Sum_probs=110.6
Q ss_pred CCCceEEEeeCCCeEEEEEcCCEEEEEEcCCCeE----EEEe--ecCCccccceEEcCCCCEEEEeCCCCeEEEc-C-CC
Q 018705 52 NHPEDVSVVVSKGALYTATRDGWVKYFILHNETL----VNWK--HIDSQSLLGLTTTKDGGVILCDNEKGLLKVT-E-EG 123 (351)
Q Consensus 52 ~~pe~i~~d~~~g~lyv~~~~g~I~~~d~~~g~~----~~~~--~~~~~p~~gl~~d~~G~L~v~d~~~gl~~~~-~-~g 123 (351)
....++++++++..++++. +|.|..|+..+++. ..+. ....... .++++++|+++++....+.+++. . ++
T Consensus 52 ~~v~~~~~~~~~~~l~~~~-dg~i~iw~~~~~~~~~~~~~~~~~~~~~~v~-~~~~~~~~~~l~~~~~d~~i~~~d~~~~ 129 (337)
T 1gxr_A 52 EVVCAVTISNPTRHVYTGG-KGCVKVWDISHPGNKSPVSQLDCLNRDNYIR-SCKLLPDGCTLIVGGEASTLSIWDLAAP 129 (337)
T ss_dssp SCCCEEEECSSSSEEEEEC-BSEEEEEETTSTTCCSCSEEEECSCTTSBEE-EEEECTTSSEEEEEESSSEEEEEECCCC
T ss_pred CceEEEEEecCCcEEEEcC-CCeEEEEECCCCCceeeeecccccCCCCcEE-EEEEcCCCCEEEEEcCCCcEEEEECCCC
Confidence 4567899997666777777 99999999866532 2222 2234456 89999999765554444544444 2 33
Q ss_pred -e---EEecCCCCCcccEEEccCCcEEEEeCCCccCCcccccccccccCCceEEEEeCCCCeEEEeec-CccccceEEEc
Q 018705 124 -V---EAIVPDASFTNDVIAASDGTLYFTVASTKYTPTDFYKDMAEGKPYGQLRKYDPKLKETTVLHE-GFYFANGIALS 198 (351)
Q Consensus 124 -~---~~l~~~~~~~n~l~~d~dG~ly~t~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~~~~~~~~~-~~~~~ngi~~~ 198 (351)
. ..+......+.+++++++|...++.+. +|.|..||..+++...... .......++++
T Consensus 130 ~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~-----------------dg~v~~~d~~~~~~~~~~~~~~~~i~~~~~~ 192 (337)
T 1gxr_A 130 TPRIKAELTSSAPACYALAISPDSKVCFSCCS-----------------DGNIAVWDLHNQTLVRQFQGHTDGASCIDIS 192 (337)
T ss_dssp --EEEEEEECSSSCEEEEEECTTSSEEEEEET-----------------TSCEEEEETTTTEEEEEECCCSSCEEEEEEC
T ss_pred CcceeeecccCCCceEEEEECCCCCEEEEEeC-----------------CCcEEEEeCCCCceeeeeecccCceEEEEEC
Confidence 2 222222356788999999976665543 4679999988776544333 33456789999
Q ss_pred CCCCEEEEEecceeEEeecCCCCceeEEeccCCCCCCceEECCCCCEEEEEe
Q 018705 199 KNEDFVVVCESWKRYWLKGDRAGILDAFIENLPGGPDNINLAPDGSFWIGLI 250 (351)
Q Consensus 199 ~dg~~lyv~~~~~~~~i~~~~~~~~~~~~~~~~g~pd~i~~d~~G~lwva~~ 250 (351)
++++.++.+...+.+.+-+...++..... ..++....++++++|++.+...
T Consensus 193 ~~~~~l~~~~~dg~i~~~d~~~~~~~~~~-~~~~~v~~~~~s~~~~~l~~~~ 243 (337)
T 1gxr_A 193 NDGTKLWTGGLDNTVRSWDLREGRQLQQH-DFTSQIFSLGYCPTGEWLAVGM 243 (337)
T ss_dssp TTSSEEEEEETTSEEEEEETTTTEEEEEE-ECSSCEEEEEECTTSSEEEEEE
T ss_pred CCCCEEEEEecCCcEEEEECCCCceEeee-cCCCceEEEEECCCCCEEEEEc
Confidence 99997877776653222222222222111 2233346678889998665543
No 140
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=98.90 E-value=6.7e-07 Score=82.36 Aligned_cols=227 Identities=11% Similarity=0.123 Sum_probs=138.3
Q ss_pred ceEEEeeCCCeEEEEEcCCEEEEEEcCCCeEE---EEe--ecCCccccceEEcCCCCEEEEeCCCCeEEEc--CCC--eE
Q 018705 55 EDVSVVVSKGALYTATRDGWVKYFILHNETLV---NWK--HIDSQSLLGLTTTKDGGVILCDNEKGLLKVT--EEG--VE 125 (351)
Q Consensus 55 e~i~~d~~~g~lyv~~~~g~I~~~d~~~g~~~---~~~--~~~~~p~~gl~~d~~G~L~v~d~~~gl~~~~--~~g--~~ 125 (351)
.+++|. .++.+.++..+|.|..||..+++.. ... ....... .+++.++|+++++....+.++++ .++ +.
T Consensus 86 ~~~~~s-~d~~l~~~s~dg~v~lWd~~~~~~~~~~~~~~~~H~~~V~-~v~~spdg~~l~sgs~d~~i~iwd~~~~~~~~ 163 (344)
T 4gqb_B 86 ADLTWV-GERGILVASDSGAVELWELDENETLIVSKFCKYEHDDIVS-TVSVLSSGTQAVSGSKDICIKVWDLAQQVVLS 163 (344)
T ss_dssp EEEEEE-TTTEEEEEETTSEEEEEEECTTSSCEEEEEEEECCSSCEE-EEEECTTSSEEEEEETTSCEEEEETTTTEEEE
T ss_pred EEEEEe-CCCeEEEEECCCEEEEEeccCCCceeEeeccccCCCCCEE-EEEECCCCCEEEEEeCCCeEEEEECCCCcEEE
Confidence 478898 4688889999999999998777431 111 1234456 89999999877766666777776 355 55
Q ss_pred EecCCCCCcccEEEccCC-cEEEEeCCCccCCcccccccccccCCceEEEEeCCCCeEEEeec---CccccceEEEcCCC
Q 018705 126 AIVPDASFTNDVIAASDG-TLYFTVASTKYTPTDFYKDMAEGKPYGQLRKYDPKLKETTVLHE---GFYFANGIALSKNE 201 (351)
Q Consensus 126 ~l~~~~~~~n~l~~d~dG-~ly~t~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~~~~~~~~~---~~~~~ngi~~~~dg 201 (351)
.+......++.+++.+++ .++++.+. ++.|..||..+++...... .......++++|++
T Consensus 164 ~~~~h~~~V~~~~~~~~~~~~l~s~s~-----------------D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~p~~ 226 (344)
T 4gqb_B 164 SYRAHAAQVTCVAASPHKDSVFLSCSE-----------------DNRILLWDTRCPKPASQIGCSAPGYLPTSLAWHPQQ 226 (344)
T ss_dssp EECCCSSCEEEEEECSSCTTEEEEEET-----------------TSCEEEEETTSSSCEEECC----CCCEEEEEECSSC
T ss_pred EEcCcCCceEEEEecCCCCCceeeecc-----------------ccccccccccccceeeeeecceeeccceeeeecCCC
Confidence 555444678899999988 57777654 4678899987765433221 12346788999865
Q ss_pred C-EEEEEecce--eEEeecCCCCc-eeEEeccCCCCCCceEECCCCC-EEEEEecCCchhhhhhhcChhHHHHHHhccch
Q 018705 202 D-FVVVCESWK--RYWLKGDRAGI-LDAFIENLPGGPDNINLAPDGS-FWIGLIKMNQTGVRAIQKCREKWELLDAYPGL 276 (351)
Q Consensus 202 ~-~lyv~~~~~--~~~i~~~~~~~-~~~~~~~~~g~pd~i~~d~~G~-lwva~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 276 (351)
. .+..+..++ ++| +...++ ...+. ........+++.++|. +.++...
T Consensus 227 ~~~l~sg~~dg~v~~w--d~~~~~~~~~~~-~h~~~v~~v~fsp~g~~~lasgs~------------------------- 278 (344)
T 4gqb_B 227 SEVFVFGDENGTVSLV--DTKSTSCVLSSA-VHSQCVTGLVFSPHSVPFLASLSE------------------------- 278 (344)
T ss_dssp TTEEEEEETTSEEEEE--ESCC--CCEEEE-CCSSCEEEEEECSSSSCCEEEEET-------------------------
T ss_pred CcceEEeccCCcEEEE--ECCCCcEEEEEc-CCCCCEEEEEEccCCCeEEEEEeC-------------------------
Confidence 4 344445444 454 222222 22222 2222335678888885 4444332
Q ss_pred hhcccCCCCCCceEEEEEECCCCeEEEEEECCCCCcccceeEEEEE--CCEEEEEecCCCeEEEEeCCCC
Q 018705 277 ISLLLPMGSDAGARVVKVDGNDGKIIRDFNDPDATYISFVTSAAEF--DGNLYLASLQSNFIGILPLDGP 344 (351)
Q Consensus 277 ~~~~~~~~~~~~~~v~~~~~~~g~~~~~~~~~~g~~~~~~~~~~~~--~g~L~ig~~~~~~i~~~~~~~~ 344 (351)
.+.|..+|...++.+ .+..+. ..++++... +..|..+....+.|...+++..
T Consensus 279 -----------D~~i~vwd~~~~~~~-~~~~H~----~~V~~v~~sp~~~~llas~s~D~~v~~w~v~~~ 332 (344)
T 4gqb_B 279 -----------DCSLAVLDSSLSELF-RSQAHR----DFVRDATWSPLNHSLLTTVGWDHQVVHHVVPTE 332 (344)
T ss_dssp -----------TSCEEEECTTCCEEE-EECCCS----SCEEEEEECSSSTTEEEEEETTSCEEEEECCC-
T ss_pred -----------CCeEEEEECCCCcEE-EEcCCC----CCEEEEEEeCCCCeEEEEEcCCCeEEEEECCCC
Confidence 134666787455543 444333 357777764 3456655444677888887654
No 141
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=98.90 E-value=1.6e-06 Score=88.27 Aligned_cols=233 Identities=9% Similarity=0.054 Sum_probs=145.6
Q ss_pred cCCCceEEEeeCCCeEEEEEcCCEEEEEEcCCCeEE-EEeecCCccccceEEcCCCCEEEEeCCCCeEEEc--CCC--eE
Q 018705 51 VNHPEDVSVVVSKGALYTATRDGWVKYFILHNETLV-NWKHIDSQSLLGLTTTKDGGVILCDNEKGLLKVT--EEG--VE 125 (351)
Q Consensus 51 ~~~pe~i~~d~~~g~lyv~~~~g~I~~~d~~~g~~~-~~~~~~~~p~~gl~~d~~G~L~v~d~~~gl~~~~--~~g--~~ 125 (351)
-....+++++|++..+.++..+|.|..||..+++.. .+........ +++++++|+.+++....+.+++. .++ ..
T Consensus 13 ~~~v~~i~~sp~~~~la~~~~~g~v~iwd~~~~~~~~~~~~~~~~v~-~~~~s~~~~~l~~~~~dg~i~vw~~~~~~~~~ 91 (814)
T 3mkq_A 13 SDRVKGIDFHPTEPWVLTTLYSGRVEIWNYETQVEVRSIQVTETPVR-AGKFIARKNWIIVGSDDFRIRVFNYNTGEKVV 91 (814)
T ss_dssp CSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEE-EEEEEGGGTEEEEEETTSEEEEEETTTCCEEE
T ss_pred CCceEEEEECCCCCEEEEEeCCCEEEEEECCCCceEEEEecCCCcEE-EEEEeCCCCEEEEEeCCCeEEEEECCCCcEEE
Confidence 345679999988888999999999999998777653 4443444556 89999999866655555666665 355 45
Q ss_pred EecCCCCCcccEEEccCCcEEEEeCCCccCCcccccccccccCCceEEEEeCCCC-eEEE-eecCccccceEEEcC-CCC
Q 018705 126 AIVPDASFTNDVIAASDGTLYFTVASTKYTPTDFYKDMAEGKPYGQLRKYDPKLK-ETTV-LHEGFYFANGIALSK-NED 202 (351)
Q Consensus 126 ~l~~~~~~~n~l~~d~dG~ly~t~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~~-~~~~-~~~~~~~~ngi~~~~-dg~ 202 (351)
.+......+.+++++++|...++.+. +|.|..||..++ .... +...-.....++++| +++
T Consensus 92 ~~~~~~~~v~~~~~s~~~~~l~~~~~-----------------dg~i~vw~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~ 154 (814)
T 3mkq_A 92 DFEAHPDYIRSIAVHPTKPYVLSGSD-----------------DLTVKLWNWENNWALEQTFEGHEHFVMCVAFNPKDPS 154 (814)
T ss_dssp EEECCSSCEEEEEECSSSSEEEEEET-----------------TSEEEEEEGGGTSEEEEEEECCSSCEEEEEEETTEEE
T ss_pred EEecCCCCEEEEEEeCCCCEEEEEcC-----------------CCEEEEEECCCCceEEEEEcCCCCcEEEEEEEcCCCC
Confidence 55444467889999999976555433 467888887655 3322 233334567899999 777
Q ss_pred EEEEEecce--eEEeecCCCCceeEEeccCCCCCCceEECC--CCCEEEEEecCCchhhhhhhcChhHHHHHHhccchhh
Q 018705 203 FVVVCESWK--RYWLKGDRAGILDAFIENLPGGPDNINLAP--DGSFWIGLIKMNQTGVRAIQKCREKWELLDAYPGLIS 278 (351)
Q Consensus 203 ~lyv~~~~~--~~~i~~~~~~~~~~~~~~~~g~pd~i~~d~--~G~lwva~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 278 (351)
.++++..++ ++|-... ......+..........+.+.+ +|.+.++...
T Consensus 155 ~l~~~~~dg~v~vwd~~~-~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~--------------------------- 206 (814)
T 3mkq_A 155 TFASGCLDRTVKVWSLGQ-STPNFTLTTGQERGVNYVDYYPLPDKPYMITASD--------------------------- 206 (814)
T ss_dssp EEEEEETTSEEEEEETTC-SSCSEEEECCCTTCCCEEEECCSTTCCEEEEECT---------------------------
T ss_pred EEEEEeCCCeEEEEECCC-CcceeEEecCCCCCEEEEEEEECCCCCEEEEEeC---------------------------
Confidence 666666665 4442211 1111222212223345667776 7876665432
Q ss_pred cccCCCCCCceEEEEEECCCCeEEEEEECCCCCcccceeEEEEE-CC-EEEEEecCCCeEEEEeCCC
Q 018705 279 LLLPMGSDAGARVVKVDGNDGKIIRDFNDPDATYISFVTSAAEF-DG-NLYLASLQSNFIGILPLDG 343 (351)
Q Consensus 279 ~~~~~~~~~~~~v~~~~~~~g~~~~~~~~~~g~~~~~~~~~~~~-~g-~L~ig~~~~~~i~~~~~~~ 343 (351)
.+.|..+|..+++.+..+..+.+ .++.+... ++ .|..++. .+.|..+++.+
T Consensus 207 ---------dg~i~~~d~~~~~~~~~~~~~~~----~v~~~~~~~~~~~l~~~~~-dg~v~vwd~~~ 259 (814)
T 3mkq_A 207 ---------DLTIKIWDYQTKSCVATLEGHMS----NVSFAVFHPTLPIIISGSE-DGTLKIWNSST 259 (814)
T ss_dssp ---------TSEEEEEETTTTEEEEEEECCSS----CEEEEEECSSSSEEEEEET-TSCEEEEETTT
T ss_pred ---------CCEEEEEECCCCcEEEEEcCCCC----CEEEEEEcCCCCEEEEEeC-CCeEEEEECCC
Confidence 24577778656777777765433 35666554 23 4555543 56677777665
No 142
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=98.90 E-value=1.5e-06 Score=81.82 Aligned_cols=227 Identities=15% Similarity=0.188 Sum_probs=143.1
Q ss_pred CCceEEEeeCCCeEEEEEcCCEEEEEEcCCCeEE-EEeecCCccccceEEcCCCCEEEEeCCCCeEEEc--CCC--eEEe
Q 018705 53 HPEDVSVVVSKGALYTATRDGWVKYFILHNETLV-NWKHIDSQSLLGLTTTKDGGVILCDNEKGLLKVT--EEG--VEAI 127 (351)
Q Consensus 53 ~pe~i~~d~~~g~lyv~~~~g~I~~~d~~~g~~~-~~~~~~~~p~~gl~~d~~G~L~v~d~~~gl~~~~--~~g--~~~l 127 (351)
...++++++++..+.++..||.|..||..+++.. .+........ .+++.++|+.+++....+.++++ .++ ...+
T Consensus 152 ~V~~v~~~~~~~~l~sgs~D~~i~iwd~~~~~~~~~~~~h~~~V~-~v~~~p~~~~l~s~s~D~~i~~wd~~~~~~~~~~ 230 (410)
T 1vyh_C 152 SVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVS-SVSIMPNGDHIVSASRDKTIKMWEVQTGYCVKTF 230 (410)
T ss_dssp CEEEEEECTTSSEEEEEETTSCCCEEETTSSCEEECCCCCSSCEE-EEEECSSSSEEEEEETTSEEEEEETTTCCEEEEE
T ss_pred cEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeEEEcCCCCCEE-EEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEE
Confidence 3457899977778889999999999998776543 3333334456 89999999877766666777776 355 5555
Q ss_pred cCCCCCcccEEEccCCcEEEEeCCCccCCcccccccccccCCceEEEEeCCCCeEEEee-cCccccceEEEcCC------
Q 018705 128 VPDASFTNDVIAASDGTLYFTVASTKYTPTDFYKDMAEGKPYGQLRKYDPKLKETTVLH-EGFYFANGIALSKN------ 200 (351)
Q Consensus 128 ~~~~~~~n~l~~d~dG~ly~t~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~~~~~~~~-~~~~~~ngi~~~~d------ 200 (351)
......++.+.++++|.++++.+. ++.|..||..+++..... ......+.++++|+
T Consensus 231 ~~h~~~v~~~~~~~~g~~l~s~s~-----------------D~~v~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~ 293 (410)
T 1vyh_C 231 TGHREWVRMVRPNQDGTLIASCSN-----------------DQTVRVWVVATKECKAELREHRHVVECISWAPESSYSSI 293 (410)
T ss_dssp ECCSSCEEEEEECTTSSEEEEEET-----------------TSCEEEEETTTCCEEEEECCCSSCEEEEEECCSCGGGGG
T ss_pred eCCCccEEEEEECCCCCEEEEEcC-----------------CCeEEEEECCCCceeeEecCCCceEEEEEEcCcccccch
Confidence 444467888999999988877654 467888888776654333 22344567888886
Q ss_pred --------------CCEEEEEecce--eEEeecCCCCce-eEEeccCCCCCCceEECCCCCEEEEEecCCchhhhhhhcC
Q 018705 201 --------------EDFVVVCESWK--RYWLKGDRAGIL-DAFIENLPGGPDNINLAPDGSFWIGLIKMNQTGVRAIQKC 263 (351)
Q Consensus 201 --------------g~~lyv~~~~~--~~~i~~~~~~~~-~~~~~~~~g~pd~i~~d~~G~lwva~~~~~~~~~~~~~~~ 263 (351)
+..++.+..++ ++| +...+.. ..+. ...+....++++++|++.++...
T Consensus 294 ~~~~~~~~~~~~~~g~~l~sgs~D~~i~iw--d~~~~~~~~~~~-~h~~~v~~v~~~~~g~~l~s~s~------------ 358 (410)
T 1vyh_C 294 SEATGSETKKSGKPGPFLLSGSRDKTIKMW--DVSTGMCLMTLV-GHDNWVRGVLFHSGGKFILSCAD------------ 358 (410)
T ss_dssp GGCCSCC-------CCEEEEEETTSEEEEE--ETTTTEEEEEEE-CCSSCEEEEEECSSSSCEEEEET------------
T ss_pred hhhccccccccCCCCCEEEEEeCCCeEEEE--ECCCCceEEEEE-CCCCcEEEEEEcCCCCEEEEEeC------------
Confidence 55566565555 555 2222322 2222 22233456789999987666543
Q ss_pred hhHHHHHHhccchhhcccCCCCCCceEEEEEECCCCeEEEEEECCCCCcccceeEEEEEC-C-EEEEEecCCCeEEEEeC
Q 018705 264 REKWELLDAYPGLISLLLPMGSDAGARVVKVDGNDGKIIRDFNDPDATYISFVTSAAEFD-G-NLYLASLQSNFIGILPL 341 (351)
Q Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~g~~~~~~~~~~g~~~~~~~~~~~~~-g-~L~ig~~~~~~i~~~~~ 341 (351)
.+.|..+|..+++.+..+..+.+ .++++..+. + .|..|+. .+.|..+++
T Consensus 359 ------------------------D~~i~vwd~~~~~~~~~~~~h~~----~v~~l~~~~~~~~l~sgs~-D~~i~vW~~ 409 (410)
T 1vyh_C 359 ------------------------DKTLRVWDYKNKRCMKTLNAHEH----FVTSLDFHKTAPYVVTGSV-DQTVKVWEC 409 (410)
T ss_dssp ------------------------TTEEEEECCTTSCCCEEEECCSS----CEEEEEECSSSSCEEEEET-TSEEEEEC-
T ss_pred ------------------------CCeEEEEECCCCceEEEEcCCCC----cEEEEEEcCCCCEEEEEeC-CCcEEEEeC
Confidence 13466667656666677765443 467777653 3 3444443 555665554
No 143
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=98.90 E-value=7e-07 Score=82.99 Aligned_cols=179 Identities=11% Similarity=0.061 Sum_probs=107.2
Q ss_pred CCCceEEEeeCCC-eEEEEEcCCEEEEEEc----CCCe------E-EEEee----------cCCccccceEEcCCCCEEE
Q 018705 52 NHPEDVSVVVSKG-ALYTATRDGWVKYFIL----HNET------L-VNWKH----------IDSQSLLGLTTTKDGGVIL 109 (351)
Q Consensus 52 ~~pe~i~~d~~~g-~lyv~~~~g~I~~~d~----~~g~------~-~~~~~----------~~~~p~~gl~~d~~G~L~v 109 (351)
....+++++|++. .+.++..+|.|..|+. .+++ . ..+.. ...... .++++++|++++
T Consensus 46 ~~v~~~~~s~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~-~~~~s~~~~~l~ 124 (425)
T 1r5m_A 46 DNIVSSTWNPLDESILAYGEKNSVARLARIVETDQEGKKYWKLTIIAELRHPFALSASSGKTTNQVT-CLAWSHDGNSIV 124 (425)
T ss_dssp SCCSEEEECSSCTTEEEEEETBTEEEEEEEEEC------CEEEEEEEEEECCCCCC------CBCEE-EEEECTTSSEEE
T ss_pred CceEEEEECCCCCcEEEEecCCceEEEEEEecccCCccccccccccccccccccccccccCCCCceE-EEEEcCCCCEEE
Confidence 3467999998777 8889999999999998 7776 2 22222 122456 899999997666
Q ss_pred EeCCCCeEEEc-CCC--eEEecCCCCCcccEEEccCCcEEEEeCCCccCCcccccccccccCCceEEEEeCCCCeEEEee
Q 018705 110 CDNEKGLLKVT-EEG--VEAIVPDASFTNDVIAASDGTLYFTVASTKYTPTDFYKDMAEGKPYGQLRKYDPKLKETTVLH 186 (351)
Q Consensus 110 ~d~~~gl~~~~-~~g--~~~l~~~~~~~n~l~~d~dG~ly~t~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~~~~~~~~ 186 (351)
+....+.+++. .++ ...+......+.+++++++|...++.+. ++.|..||..+++.....
T Consensus 125 ~~~~dg~i~i~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-----------------d~~i~iwd~~~~~~~~~~ 187 (425)
T 1r5m_A 125 TGVENGELRLWNKTGALLNVLNFHRAPIVSVKWNKDGTHIISMDV-----------------ENVTILWNVISGTVMQHF 187 (425)
T ss_dssp EEETTSCEEEEETTSCEEEEECCCCSCEEEEEECTTSSEEEEEET-----------------TCCEEEEETTTTEEEEEE
T ss_pred EEeCCCeEEEEeCCCCeeeeccCCCccEEEEEECCCCCEEEEEec-----------------CCeEEEEECCCCcEEEEe
Confidence 55455545554 455 5555444467889999999976655443 467888888776654333
Q ss_pred cCc-cc---------------cceEEEcCCCCEEEEEecceeEEeecCCCCce-eEEeccCCCCCCceEECCCCCEEEEE
Q 018705 187 EGF-YF---------------ANGIALSKNEDFVVVCESWKRYWLKGDRAGIL-DAFIENLPGGPDNINLAPDGSFWIGL 249 (351)
Q Consensus 187 ~~~-~~---------------~ngi~~~~dg~~lyv~~~~~~~~i~~~~~~~~-~~~~~~~~g~pd~i~~d~~G~lwva~ 249 (351)
... .. ...+++++++. ++++...+.+.+-+...++. ..+. ...+....++++++|++.++.
T Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~g~i~~~d~~~~~~~~~~~-~~~~~i~~~~~~~~~~~l~~~ 265 (425)
T 1r5m_A 188 ELKETGGSSINAENHSGDGSLGVDVEWVDDDK-FVIPGPKGAIFVYQITEKTPTGKLI-GHHGPISVLEFNDTNKLLLSA 265 (425)
T ss_dssp CCC---------------CCCBSCCEEEETTE-EEEECGGGCEEEEETTCSSCSEEEC-CCSSCEEEEEEETTTTEEEEE
T ss_pred eccccCccceeeccccCCcceeeEEEEcCCCE-EEEEcCCCeEEEEEcCCCceeeeec-cCCCceEEEEECCCCCEEEEE
Confidence 221 11 66788988874 66665555222222112221 2222 222233567888888866654
Q ss_pred e
Q 018705 250 I 250 (351)
Q Consensus 250 ~ 250 (351)
.
T Consensus 266 ~ 266 (425)
T 1r5m_A 266 S 266 (425)
T ss_dssp E
T ss_pred c
Confidence 4
No 144
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=98.90 E-value=3.5e-06 Score=82.47 Aligned_cols=232 Identities=13% Similarity=0.131 Sum_probs=147.7
Q ss_pred CceEEEee--CCCeEEEEEcCCEEEEEEcCCC--------eE-EEEeecCCccccceEEcCCCCEEEEeCCC----CeEE
Q 018705 54 PEDVSVVV--SKGALYTATRDGWVKYFILHNE--------TL-VNWKHIDSQSLLGLTTTKDGGVILCDNEK----GLLK 118 (351)
Q Consensus 54 pe~i~~d~--~~g~lyv~~~~g~I~~~d~~~g--------~~-~~~~~~~~~p~~gl~~d~~G~L~v~d~~~----gl~~ 118 (351)
..+++++| ++..++++..+|.|..|+..++ +. ..+........ .++++++|+.+++.... +.+.
T Consensus 67 v~~~~~sp~~~~~~l~s~~~dg~v~vw~~~~~~~~~~~~~~~~~~~~~~~~~v~-~~~~s~~~~~l~~~~~~~~~~~~v~ 145 (615)
T 1pgu_A 67 VTTVKFSPIKGSQYLCSGDESGKVIVWGWTFDKESNSVEVNVKSEFQVLAGPIS-DISWDFEGRRLCVVGEGRDNFGVFI 145 (615)
T ss_dssp EEEEEECSSTTCCEEEEEETTSEEEEEEEEEEGGGTEEEEEEEEEEECCSSCEE-EEEECTTSSEEEEEECCSSCSEEEE
T ss_pred EEEEEECcCCCCCEEEEecCCCEEEEEeCCCCcccccccccccchhhcccccEE-EEEEeCCCCEEEEeccCCCCccEEE
Confidence 57899998 7788899999999999998544 22 22333344556 89999999765544332 4555
Q ss_pred EcCCC--eEEecCCCCCcccEEEccCCc-EEEEeCCCccCCcccccccccccCCceEEEEeCCCCeEEEeecC-cc---c
Q 018705 119 VTEEG--VEAIVPDASFTNDVIAASDGT-LYFTVASTKYTPTDFYKDMAEGKPYGQLRKYDPKLKETTVLHEG-FY---F 191 (351)
Q Consensus 119 ~~~~g--~~~l~~~~~~~n~l~~d~dG~-ly~t~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~~~~~~~~~~-~~---~ 191 (351)
+...+ ...+......++.++++++|. +.++.+. ++.|..||..+++....... .. .
T Consensus 146 ~~d~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~-----------------d~~v~vwd~~~~~~~~~~~~~~~~~~~ 208 (615)
T 1pgu_A 146 SWDSGNSLGEVSGHSQRINACHLKQSRPMRSMTVGD-----------------DGSVVFYQGPPFKFSASDRTHHKQGSF 208 (615)
T ss_dssp ETTTCCEEEECCSCSSCEEEEEECSSSSCEEEEEET-----------------TTEEEEEETTTBEEEEEECSSSCTTCC
T ss_pred EEECCCcceeeecCCccEEEEEECCCCCcEEEEEeC-----------------CCcEEEEeCCCcceeeeecccCCCCce
Confidence 55544 555544446788999999996 5655543 46899999877765443332 23 4
Q ss_pred cceEEEcCC-CCEEEEEecce--eEEeecCCCCce-eEEec---cCCCCCCceEECCCCCEEEEEecCCchhhhhhhcCh
Q 018705 192 ANGIALSKN-EDFVVVCESWK--RYWLKGDRAGIL-DAFIE---NLPGGPDNINLAPDGSFWIGLIKMNQTGVRAIQKCR 264 (351)
Q Consensus 192 ~ngi~~~~d-g~~lyv~~~~~--~~~i~~~~~~~~-~~~~~---~~~g~pd~i~~d~~G~lwva~~~~~~~~~~~~~~~~ 264 (351)
...++++|+ ++.++.+..++ ++|- ...++. ..+.. ...+....+.++ +|++.++...
T Consensus 209 v~~~~~~~~~~~~l~~~~~dg~i~vwd--~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~~l~~~~~------------- 272 (615)
T 1pgu_A 209 VRDVEFSPDSGEFVITVGSDRKISCFD--GKSGEFLKYIEDDQEPVQGGIFALSWL-DSQKFATVGA------------- 272 (615)
T ss_dssp EEEEEECSTTCCEEEEEETTCCEEEEE--TTTCCEEEECCBTTBCCCSCEEEEEES-SSSEEEEEET-------------
T ss_pred EEEEEECCCCCCEEEEEeCCCeEEEEE--CCCCCEeEEecccccccCCceEEEEEc-CCCEEEEEcC-------------
Confidence 678999999 98777777666 4442 122222 22211 122233457788 8876666543
Q ss_pred hHHHHHHhccchhhcccCCCCCCceEEEEEECCCCeEEEEEECCCCCcccceeEEEE-ECCEEEEEecCCCeEEEEeCCC
Q 018705 265 EKWELLDAYPGLISLLLPMGSDAGARVVKVDGNDGKIIRDFNDPDATYISFVTSAAE-FDGNLYLASLQSNFIGILPLDG 343 (351)
Q Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~g~~~~~~~~~~g~~~~~~~~~~~-~~g~L~ig~~~~~~i~~~~~~~ 343 (351)
.+.+..+|..+++.+..+..+.......+..+.. .+..+..++. .+.|..+++..
T Consensus 273 -----------------------d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-~g~i~~~d~~~ 328 (615)
T 1pgu_A 273 -----------------------DATIRVWDVTTSKCVQKWTLDKQQLGNQQVGVVATGNGRIISLSL-DGTLNFYELGH 328 (615)
T ss_dssp -----------------------TSEEEEEETTTTEEEEEEECCTTCGGGCEEEEEEEETTEEEEEET-TSCEEEEETTE
T ss_pred -----------------------CCcEEEEECCCCcEEEEEcCCCCcccCceeEEEeCCCCeEEEEEC-CCCEEEEECCC
Confidence 1357778885688888887653333334555544 5666777765 67788888764
No 145
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=98.89 E-value=2.4e-06 Score=77.70 Aligned_cols=244 Identities=11% Similarity=0.030 Sum_probs=143.6
Q ss_pred CCceEEEeeCCCeEEEEEcCCEEEEEEcCCCeEEEEeecCCccccceEEcCCCCEEEEeCCC-----CeEEE-c-C-CC-
Q 018705 53 HPEDVSVVVSKGALYTATRDGWVKYFILHNETLVNWKHIDSQSLLGLTTTKDGGVILCDNEK-----GLLKV-T-E-EG- 123 (351)
Q Consensus 53 ~pe~i~~d~~~g~lyv~~~~g~I~~~d~~~g~~~~~~~~~~~p~~gl~~d~~G~L~v~d~~~-----gl~~~-~-~-~g- 123 (351)
...++++++++..++++..+|.|..||..+++..........+. .++++++|+.+++.... +.+++ + . ..
T Consensus 76 ~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~v~-~~~~~~~~~~l~~~~~~~~~~~g~i~~~d~~~~~~ 154 (369)
T 3zwl_B 76 TIWSIDVDCFTKYCVTGSADYSIKLWDVSNGQCVATWKSPVPVK-RVEFSPCGNYFLAILDNVMKNPGSINIYEIERDSA 154 (369)
T ss_dssp CEEEEEECTTSSEEEEEETTTEEEEEETTTCCEEEEEECSSCEE-EEEECTTSSEEEEEECCBTTBCCEEEEEEEEECTT
T ss_pred cEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEeecCCCeE-EEEEccCCCEEEEecCCccCCCCEEEEEEecCCcc
Confidence 45688999777788899999999999987776644334445566 89999999766654443 43333 3 1 11
Q ss_pred ---eEEecCC--------C--CCcccEEEccCCcEEEEeCCCccCCcccccccccccCCceEEEEeCCC-CeEEE-eecC
Q 018705 124 ---VEAIVPD--------A--SFTNDVIAASDGTLYFTVASTKYTPTDFYKDMAEGKPYGQLRKYDPKL-KETTV-LHEG 188 (351)
Q Consensus 124 ---~~~l~~~--------~--~~~n~l~~d~dG~ly~t~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~-~~~~~-~~~~ 188 (351)
....... . ..+..++++++|...++... +|.|..||..+ ++... +...
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-----------------dg~i~i~d~~~~~~~~~~~~~~ 217 (369)
T 3zwl_B 155 THELTKVSEEPIHKIITHEGLDAATVAGWSTKGKYIIAGHK-----------------DGKISKYDVSNNYEYVDSIDLH 217 (369)
T ss_dssp TCCEEEECSSCSEEEECCTTCCCEEEEEECGGGCEEEEEET-----------------TSEEEEEETTTTTEEEEEEECC
T ss_pred ceeecccccceeeeccCCcCccceeEEEEcCCCCEEEEEcC-----------------CCEEEEEECCCCcEeEEEEecC
Confidence 1111111 0 26788899999976665433 46899999876 44333 3333
Q ss_pred ccccceEEEcCCCCEEEEEecceeEEeecCCCCce-eEEeccCCCCCCceEECCCCCEEEEEecCCc-hhhhhhhcChhH
Q 018705 189 FYFANGIALSKNEDFVVVCESWKRYWLKGDRAGIL-DAFIENLPGGPDNINLAPDGSFWIGLIKMNQ-TGVRAIQKCREK 266 (351)
Q Consensus 189 ~~~~ngi~~~~dg~~lyv~~~~~~~~i~~~~~~~~-~~~~~~~~g~pd~i~~d~~G~lwva~~~~~~-~~~~~~~~~~~~ 266 (351)
.....+++++++++.|+.+..++.+.+-+...++. ..+. .......++++++|.+.+....... ..+...
T Consensus 218 ~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~--~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~------ 289 (369)
T 3zwl_B 218 EKSISDMQFSPDLTYFITSSRDTNSFLVDVSTLQVLKKYE--TDCPLNTAVITPLKEFIILGGGQEAKDVTTTS------ 289 (369)
T ss_dssp SSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEE--CSSCEEEEEECSSSSEEEEEECCC--------------
T ss_pred CCceeEEEECCCCCEEEEecCCceEEEEECCCCceeeeec--CCCCceeEEecCCCceEEEeecCCCceEEEEe------
Confidence 44567899999999787776666322222222222 2222 2223456788999985555443211 111000
Q ss_pred HHHHHhccchhhcccCCCCCCceEEEEEECCCCeEEEEEECCCCCcccceeEEEEE-CCEEEEEecCCCeEEEEeCCC
Q 018705 267 WELLDAYPGLISLLLPMGSDAGARVVKVDGNDGKIIRDFNDPDATYISFVTSAAEF-DGNLYLASLQSNFIGILPLDG 343 (351)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~g~~~~~~~~~~g~~~~~~~~~~~~-~g~L~ig~~~~~~i~~~~~~~ 343 (351)
.......+..+|..+++.+..+..+.+ .++++... ++++.++....+.|..+++..
T Consensus 290 -----------------~~~~~~~i~~~d~~~~~~~~~~~~~~~----~v~~~~~s~~~~~l~s~~~dg~v~iw~~~~ 346 (369)
T 3zwl_B 290 -----------------ANEGKFEARFYHKIFEEEIGRVQGHFG----PLNTVAISPQGTSYASGGEDGFIRLHHFEK 346 (369)
T ss_dssp ----------------------CEEEEEETTTCCEEEEEECCSS----CEEEEEECTTSSEEEEEETTSEEEEEEECH
T ss_pred -----------------cCCCcceeEEEecCCCcchhheecccC----cEEEEEECCCCCEEEEEcCCCeEEEEECcc
Confidence 001112466778767788887765543 46666654 344444444467788887654
No 146
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=98.89 E-value=1.1e-06 Score=77.24 Aligned_cols=163 Identities=13% Similarity=0.110 Sum_probs=103.4
Q ss_pred cCCEEEEEEcCCCeEEEEeecCCccccceEEcCCCCEEEEeCCCCeEEEcC-C-C-eEEecCCC--CCcccEEEccCCcE
Q 018705 71 RDGWVKYFILHNETLVNWKHIDSQSLLGLTTTKDGGVILCDNEKGLLKVTE-E-G-VEAIVPDA--SFTNDVIAASDGTL 145 (351)
Q Consensus 71 ~~g~I~~~d~~~g~~~~~~~~~~~p~~gl~~d~~G~L~v~d~~~gl~~~~~-~-g-~~~l~~~~--~~~n~l~~d~dG~l 145 (351)
.++.|+.+|..+++.+.+......+. .++++++|+.+++.....++.++. + + ...+.... ..+.++++++||..
T Consensus 20 ~~~~i~~~d~~~~~~~~~~~~~~~v~-~~~~spdg~~l~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~ 98 (297)
T 2ojh_A 20 MRSSIEIFNIRTRKMRVVWQTPELFE-APNWSPDGKYLLLNSEGLLYRLSLAGDPSPEKVDTGFATICNNDHGISPDGAL 98 (297)
T ss_dssp CCEEEEEEETTTTEEEEEEEESSCCE-EEEECTTSSEEEEEETTEEEEEESSSCCSCEECCCTTCCCBCSCCEECTTSSE
T ss_pred cceeEEEEeCCCCceeeeccCCcceE-eeEECCCCCEEEEEcCCeEEEEeCCCCCCceEeccccccccccceEECCCCCE
Confidence 46789999998888776655556677 999999998666655556777773 6 6 55443322 56788999999964
Q ss_pred EEEeCCCccCCcccccccccccCCceEEEEeCCCCeEEEeecCccccceEEEcCCCCEEEEEe-cce--eEEeecCCCCc
Q 018705 146 YFTVASTKYTPTDFYKDMAEGKPYGQLRKYDPKLKETTVLHEGFYFANGIALSKNEDFVVVCE-SWK--RYWLKGDRAGI 222 (351)
Q Consensus 146 y~t~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~~~~~~~~~~~~~~ngi~~~~dg~~lyv~~-~~~--~~~i~~~~~~~ 222 (351)
++...... .....|+.++..+++.+.+... ...+.++++||++.++++. ..+ ++|.-+...+.
T Consensus 99 l~~~~~~~-------------~~~~~l~~~~~~~~~~~~~~~~-~~~~~~~~spdg~~l~~~~~~~~~~~l~~~~~~~~~ 164 (297)
T 2ojh_A 99 YAISDKVE-------------FGKSAIYLLPSTGGTPRLMTKN-LPSYWHGWSPDGKSFTYCGIRDQVFDIYSMDIDSGV 164 (297)
T ss_dssp EEEEECTT-------------TSSCEEEEEETTCCCCEECCSS-SSEEEEEECTTSSEEEEEEEETTEEEEEEEETTTCC
T ss_pred EEEEEeCC-------------CCcceEEEEECCCCceEEeecC-CCccceEECCCCCEEEEEECCCCceEEEEEECCCCc
Confidence 44432100 1235799999877765554332 3467789999999777543 333 55543322233
Q ss_pred eeEEeccCCCCCCceEECCCCC-EEEEE
Q 018705 223 LDAFIENLPGGPDNINLAPDGS-FWIGL 249 (351)
Q Consensus 223 ~~~~~~~~~g~pd~i~~d~~G~-lwva~ 249 (351)
...+. ...+....+.++++|+ ++++.
T Consensus 165 ~~~~~-~~~~~~~~~~~s~dg~~l~~~~ 191 (297)
T 2ojh_A 165 ETRLT-HGEGRNDGPDYSPDGRWIYFNS 191 (297)
T ss_dssp EEECC-CSSSCEEEEEECTTSSEEEEEE
T ss_pred ceEcc-cCCCccccceECCCCCEEEEEe
Confidence 33322 2233345678899997 44443
No 147
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=98.89 E-value=4.3e-06 Score=75.68 Aligned_cols=182 Identities=15% Similarity=0.163 Sum_probs=113.2
Q ss_pred CCcCCCceEEEeeCC-CeEEEEEcCCEEEEEEcCCC--e----EEEEeecCCccccceEEcCCCCEEEEeCCCCeEEEc-
Q 018705 49 GCVNHPEDVSVVVSK-GALYTATRDGWVKYFILHNE--T----LVNWKHIDSQSLLGLTTTKDGGVILCDNEKGLLKVT- 120 (351)
Q Consensus 49 ~~~~~pe~i~~d~~~-g~lyv~~~~g~I~~~d~~~g--~----~~~~~~~~~~p~~gl~~d~~G~L~v~d~~~gl~~~~- 120 (351)
+.-..-.++++.+.+ +.+.++..|+.|..|+..+. + ...+........ .+++.++|+++++....+.++++
T Consensus 15 gH~~~V~~l~~~~~~~~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~v~-~~~~s~dg~~l~s~s~D~~v~~wd 93 (319)
T 3frx_A 15 GHNGWVTSLATSAGQPNLLLSASRDKTLISWKLTGDDQKFGVPVRSFKGHSHIVQ-DCTLTADGAYALSASWDKTLRLWD 93 (319)
T ss_dssp CCSSCEEEEEECSSCTTEEEEEETTSEEEEEEEEEETTEEEEEEEEEECCSSCEE-EEEECTTSSEEEEEETTSEEEEEE
T ss_pred cccceEEEEEccCCCccEEEEecCCccEEEecCCCCCccccccceEEeCCcccEE-EEEECCCCCEEEEEeCCCEEEEEE
Confidence 433445678898655 57888999999998886321 1 123333334455 88999999887776667777777
Q ss_pred -CCC--eEEecCCCCCcccEEEccCCcEEEEeCCCccCCcccccccccccCCceEEEEeCCCCeEEEeecCccccceEEE
Q 018705 121 -EEG--VEAIVPDASFTNDVIAASDGTLYFTVASTKYTPTDFYKDMAEGKPYGQLRKYDPKLKETTVLHEGFYFANGIAL 197 (351)
Q Consensus 121 -~~g--~~~l~~~~~~~n~l~~d~dG~ly~t~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~~~~~~~~~~~~~~ngi~~ 197 (351)
.++ ...+......+++++++++|.+.++.+. ++.|..||.+.+....+.........+++
T Consensus 94 ~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~-----------------D~~i~vwd~~~~~~~~~~~h~~~v~~~~~ 156 (319)
T 3frx_A 94 VATGETYQRFVGHKSDVMSVDIDKKASMIISGSR-----------------DKTIKVWTIKGQCLATLLGHNDWVSQVRV 156 (319)
T ss_dssp TTTTEEEEEEECCSSCEEEEEECTTSCEEEEEET-----------------TSCEEEEETTSCEEEEECCCSSCEEEEEE
T ss_pred CCCCCeeEEEccCCCcEEEEEEcCCCCEEEEEeC-----------------CCeEEEEECCCCeEEEEeccCCcEEEEEE
Confidence 355 4555444467889999999988877654 46788888775555544443444566777
Q ss_pred cCC------CCEEEEEecce--eEEeecCCCCcee-EEeccCCCCCCceEECCCCCEEEEEec
Q 018705 198 SKN------EDFVVVCESWK--RYWLKGDRAGILD-AFIENLPGGPDNINLAPDGSFWIGLIK 251 (351)
Q Consensus 198 ~~d------g~~lyv~~~~~--~~~i~~~~~~~~~-~~~~~~~g~pd~i~~d~~G~lwva~~~ 251 (351)
.|+ +..++.+..++ ++|-. ...+.. .+. ...+....++++++|++.++...
T Consensus 157 ~~~~~~~~~~~~l~s~~~d~~i~~wd~--~~~~~~~~~~-~h~~~v~~~~~sp~g~~l~s~~~ 216 (319)
T 3frx_A 157 VPNEKADDDSVTIISAGNDKMVKAWNL--NQFQIEADFI-GHNSNINTLTASPDGTLIASAGK 216 (319)
T ss_dssp CCC------CCEEEEEETTSCEEEEET--TTTEEEEEEC-CCCSCEEEEEECTTSSEEEEEET
T ss_pred ccCCCCCCCccEEEEEeCCCEEEEEEC--Ccchhheeec-CCCCcEEEEEEcCCCCEEEEEeC
Confidence 774 33455555555 55522 222221 122 22223345788999987776543
No 148
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=98.88 E-value=6.9e-08 Score=92.52 Aligned_cols=184 Identities=12% Similarity=0.166 Sum_probs=105.7
Q ss_pred eEEecCCCCCcccEEEccCCcEEEEeCCCccCCcccccccccccCCceEEEEeCCCCeEEEee---cC------ccccce
Q 018705 124 VEAIVPDASFTNDVIAASDGTLYFTVASTKYTPTDFYKDMAEGKPYGQLRKYDPKLKETTVLH---EG------FYFANG 194 (351)
Q Consensus 124 ~~~l~~~~~~~n~l~~d~dG~ly~t~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~~~~~~~~---~~------~~~~ng 194 (351)
+++++..+..|.++++++||++||++.. .++|+++++.+++.+.+. .. ...+.|
T Consensus 19 ~~~~a~~l~~P~~~a~~pdG~l~V~e~~-----------------gg~I~~~~~~~g~~~~~~~~~~~~~~~~g~~Gllg 81 (454)
T 1cru_A 19 KKVILSNLNKPHALLWGPDNQIWLTERA-----------------TGKILRVNPESGSVKTVFQVPEIVNDADGQNGLLG 81 (454)
T ss_dssp EEEEECCCSSEEEEEECTTSCEEEEETT-----------------TCEEEEECTTTCCEEEEEECTTCCCCTTSSCSEEE
T ss_pred EEEEECCCCCceEEEEcCCCcEEEEEcC-----------------CCEEEEEECCCCcEeEEecCCccccccCCCCceeE
Confidence 5667776788999999999999999864 247999987666655433 11 233459
Q ss_pred EEEcCC---CCEEEEEecc-------------e---eEEeecC--CCCceeEEeccCC----CCCCceEECCCCCEEEEE
Q 018705 195 IALSKN---EDFVVVCESW-------------K---RYWLKGD--RAGILDAFIENLP----GGPDNINLAPDGSFWIGL 249 (351)
Q Consensus 195 i~~~~d---g~~lyv~~~~-------------~---~~~i~~~--~~~~~~~~~~~~~----g~pd~i~~d~~G~lwva~ 249 (351)
|+++|| +..||++.+. . |+...+. .....+.+...++ ..+.+|++++||+|||+.
T Consensus 82 ia~~Pdf~~~g~lYv~~s~~~~~~~~~~~~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~H~~~~l~f~pDG~Lyv~~ 161 (454)
T 1cru_A 82 FAFHPDFKNNPYIYISGTFKNPKSTDKELPNQTIIRRYTYNKSTDTLEKPVDLLAGLPSSKDHQSGRLVIGPDQKIYYTI 161 (454)
T ss_dssp EEECTTTTTSCEEEEEEEEECTTC--CCSCEEEEEEEEEEETTTTEEEEEEEEEEEECCCSSCCEEEEEECTTSCEEEEE
T ss_pred EEECCCcCcCCEEEEEEeccccCCCccccccccEEEEEEECCCCCCcCCcEEEEEcCCCCCCCCCCeEeECCCCeEEEEE
Confidence 999996 5679998753 2 4544432 1122333332222 236779999999999998
Q ss_pred ecCCchhhhhhhcChhHHHHHHhccchhhcccCCCCCCceEEEEEECCCCe-----------EEEEEECCCCCcccceeE
Q 018705 250 IKMNQTGVRAIQKCREKWELLDAYPGLISLLLPMGSDAGARVVKVDGNDGK-----------IIRDFNDPDATYISFVTS 318 (351)
Q Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~g~-----------~~~~~~~~~g~~~~~~~~ 318 (351)
........+.. ..+.- ..+.|..-...........+.|+|+++ +|+ ..+.+.. | +.++..
T Consensus 162 Gd~~~~~~~~~-~~~~~---~~~~p~~~~~~aq~~~~~~G~IlRi~~-dG~ip~~Npf~~~~~~ei~a~--G--~RNp~g 232 (454)
T 1cru_A 162 GDQGRNQLAYL-FLPNQ---AQHTPTQQELNGKDYHTYMGKVLRLNL-DGSIPKDNPSFNGVVSHIYTL--G--HRNPQG 232 (454)
T ss_dssp CCTTTTSGGGT-TSCCC---TTCCCCHHHHHTTCCTTCSSEEEEECT-TSCCCTTCCEETTEECSEEEB--C--CSEEEE
T ss_pred CCCCCCCcccc-ccccc---cccccccccccccCCCCCCeeEEEEeC-CCCCCCCCCCCCCCcceEEEE--C--CCCcce
Confidence 75322110000 00000 000000000000000123578999999 997 2333432 2 235666
Q ss_pred EEEE-CCEEEEEecCC
Q 018705 319 AAEF-DGNLYLASLQS 333 (351)
Q Consensus 319 ~~~~-~g~L~ig~~~~ 333 (351)
+..+ .|+||++....
T Consensus 233 la~dp~G~L~~~d~g~ 248 (454)
T 1cru_A 233 LAFTPNGKLLQSEQGP 248 (454)
T ss_dssp EEECTTSCEEEEEECS
T ss_pred EEECCCCCEEEEecCC
Confidence 6665 58999998644
No 149
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=98.88 E-value=5.6e-07 Score=78.30 Aligned_cols=155 Identities=16% Similarity=0.145 Sum_probs=107.5
Q ss_pred CCcccEEEccCCcEEEEeCCCccCCcccccccccccCCceEEEEeCCCCeEEEeec--CccccceEEEcCCCCEEEEEec
Q 018705 132 SFTNDVIAASDGTLYFTVASTKYTPTDFYKDMAEGKPYGQLRKYDPKLKETTVLHE--GFYFANGIALSKNEDFVVVCES 209 (351)
Q Consensus 132 ~~~n~l~~d~dG~ly~t~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~~~~~~~~~--~~~~~ngi~~~~dg~~lyv~~~ 209 (351)
.+..++.+++ +++|+++..+ ....|.++|++++++..-.. .-.+..|+++. ++.||+...
T Consensus 21 ~ftqGL~~~~-~~LyestG~~---------------g~S~v~~vD~~tgkv~~~~~l~~~~fgeGi~~~--~~~ly~ltw 82 (243)
T 3mbr_X 21 AFTEGLFYLR-GHLYESTGET---------------GRSSVRKVDLETGRILQRAEVPPPYFGAGIVAW--RDRLIQLTW 82 (243)
T ss_dssp CCEEEEEEET-TEEEEEECCT---------------TSCEEEEEETTTCCEEEEEECCTTCCEEEEEEE--TTEEEEEES
T ss_pred cccccEEEEC-CEEEEECCCC---------------CCceEEEEECCCCCEEEEEeCCCCcceeEEEEe--CCEEEEEEe
Confidence 6788999986 7999998641 13479999999998765433 23345666665 557999875
Q ss_pred ce-eEEeecCCCCc-eeEEeccCCCCCCceEECCCCCEEEEEecCCchhhhhhhcChhHHHHHHhccchhhcccCCCCCC
Q 018705 210 WK-RYWLKGDRAGI-LDAFIENLPGGPDNINLAPDGSFWIGLIKMNQTGVRAIQKCREKWELLDAYPGLISLLLPMGSDA 287 (351)
Q Consensus 210 ~~-~~~i~~~~~~~-~~~~~~~~~g~pd~i~~d~~G~lwva~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 287 (351)
.. +.++-+....+ ...+. .++.+.+++.| .++||++...
T Consensus 83 ~~~~v~v~D~~tl~~~~ti~--~~~~Gwglt~d-g~~L~vSdgs------------------------------------ 123 (243)
T 3mbr_X 83 RNHEGFVYDLATLTPRARFR--YPGEGWALTSD-DSHLYMSDGT------------------------------------ 123 (243)
T ss_dssp SSSEEEEEETTTTEEEEEEE--CSSCCCEEEEC-SSCEEEECSS------------------------------------
T ss_pred eCCEEEEEECCcCcEEEEEe--CCCCceEEeeC-CCEEEEECCC------------------------------------
Confidence 55 55554433222 22232 23445677765 3679999643
Q ss_pred ceEEEEEECCCCeEEEEEEC-CCCCcccceeEEEEECCEEEEEecCCCeEEEEeCCCC
Q 018705 288 GARVVKVDGNDGKIIRDFND-PDATYISFVTSAAEFDGNLYLASLQSNFIGILPLDGP 344 (351)
Q Consensus 288 ~~~v~~~~~~~g~~~~~~~~-~~g~~~~~~~~~~~~~g~L~ig~~~~~~i~~~~~~~~ 344 (351)
..|..+||++.+++..+.. .++.....+..+...+|+||+..+..+.|.++++++-
T Consensus 124 -~~l~~iDp~t~~~~~~I~V~~~g~~~~~lNeLe~~~G~lyanvw~s~~I~vIDp~tG 180 (243)
T 3mbr_X 124 -AVIRKLDPDTLQQVGSIKVTAGGRPLDNLNELEWVNGELLANVWLTSRIARIDPASG 180 (243)
T ss_dssp -SEEEEECTTTCCEEEEEECEETTEECCCEEEEEEETTEEEEEETTTTEEEEECTTTC
T ss_pred -CeEEEEeCCCCeEEEEEEEccCCcccccceeeEEeCCEEEEEECCCCeEEEEECCCC
Confidence 3588999977888888865 2455556677777789999999999999999997653
No 150
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=98.88 E-value=7.5e-07 Score=83.25 Aligned_cols=231 Identities=13% Similarity=0.046 Sum_probs=139.1
Q ss_pred CceEEEeeCCCeEEEEEcCCEEEEEEcCCCeEEEEeecCCccccceEEcCCCCEEEEeCCCCeEEEc-C-CC-e-EEecC
Q 018705 54 PEDVSVVVSKGALYTATRDGWVKYFILHNETLVNWKHIDSQSLLGLTTTKDGGVILCDNEKGLLKVT-E-EG-V-EAIVP 129 (351)
Q Consensus 54 pe~i~~d~~~g~lyv~~~~g~I~~~d~~~g~~~~~~~~~~~p~~gl~~d~~G~L~v~d~~~gl~~~~-~-~g-~-~~l~~ 129 (351)
..+++++|++..++++..+|.|..||..+++............ ..++.++|+++++....+.+++. . .+ . ..+..
T Consensus 59 ~~~~~~s~~g~~l~~~~~d~~v~i~d~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~ 137 (420)
T 3vl1_A 59 GKGNTFEKVGSHLYKARLDGHDFLFNTIIRDGSKMLKRADYTA-VDTAKLQMRRFILGTTEGDIKVLDSNFNLQREIDQA 137 (420)
T ss_dssp CTTCEEEEEETTEEEEEETTEEEEEECCSEETTTTSCSCCEEE-EEEECSSSCEEEEEETTSCEEEECTTSCEEEEETTS
T ss_pred ccceeeeecCCeEEEEEcCCcEEEEEecccceeeEEecCCceE-EEEEecCCCEEEEEECCCCEEEEeCCCcceeeeccc
Confidence 4589999988899999999999999986554322111111122 34567888766655555655555 3 44 3 33333
Q ss_pred CCCCcccEEEccCCcEEEEeCCCccCCcccccccccccCCceEEEEeCCCCeE-EEeecCccccceEEEcCCCCEEEEEe
Q 018705 130 DASFTNDVIAASDGTLYFTVASTKYTPTDFYKDMAEGKPYGQLRKYDPKLKET-TVLHEGFYFANGIALSKNEDFVVVCE 208 (351)
Q Consensus 130 ~~~~~n~l~~d~dG~ly~t~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~~~~-~~~~~~~~~~ngi~~~~dg~~lyv~~ 208 (351)
....+.+++++++|.+.++.+. ++.|..||..+++. ..+.........++++|+++.|+.+.
T Consensus 138 h~~~v~~~~~~~~~~~l~s~s~-----------------d~~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~ 200 (420)
T 3vl1_A 138 HVSEITKLKFFPSGEALISSSQ-----------------DMQLKIWSVKDGSNPRTLIGHRATVTDIAIIDRGRNVLSAS 200 (420)
T ss_dssp SSSCEEEEEECTTSSEEEEEET-----------------TSEEEEEETTTCCCCEEEECCSSCEEEEEEETTTTEEEEEE
T ss_pred ccCccEEEEECCCCCEEEEEeC-----------------CCeEEEEeCCCCcCceEEcCCCCcEEEEEEcCCCCEEEEEc
Confidence 3467899999999987766543 46899999876654 33333344567899999999777776
Q ss_pred cce--eEEeecCCCCce-eEEecc-----------------------CCCCCCceEECCCCCEEEEEecCCchhhhhhhc
Q 018705 209 SWK--RYWLKGDRAGIL-DAFIEN-----------------------LPGGPDNINLAPDGSFWIGLIKMNQTGVRAIQK 262 (351)
Q Consensus 209 ~~~--~~~i~~~~~~~~-~~~~~~-----------------------~~g~pd~i~~d~~G~lwva~~~~~~~~~~~~~~ 262 (351)
.++ ++|-. ..++. ..+... .......++++++|++.++...
T Consensus 201 ~d~~v~iwd~--~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~----------- 267 (420)
T 3vl1_A 201 LDGTIRLWEC--GTGTTIHTFNRKENPHDGVNSIALFVGTDRQLHEISTSKKNNLEFGTYGKYVIAGHV----------- 267 (420)
T ss_dssp TTSCEEEEET--TTTEEEEEECBTTBTTCCEEEEEEEECCCSSCGGGCCCCCCTTCSSCTTEEEEEEET-----------
T ss_pred CCCcEEEeEC--CCCceeEEeecCCCCCCCccEEEEecCCcceeeecccCcccceEEcCCCCEEEEEcC-----------
Confidence 666 55521 11221 111100 0112234566778865554332
Q ss_pred ChhHHHHHHhccchhhcccCCCCCCceEEEEEECCCCeEEEEEECCCCCcccceeEEEEEC-C--EEEEEecCCCeEEEE
Q 018705 263 CREKWELLDAYPGLISLLLPMGSDAGARVVKVDGNDGKIIRDFNDPDATYISFVTSAAEFD-G--NLYLASLQSNFIGIL 339 (351)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~g~~~~~~~~~~g~~~~~~~~~~~~~-g--~L~ig~~~~~~i~~~ 339 (351)
.+.|..+|..+++....+.... ...++++.... + .|+.|+ ..+.|..+
T Consensus 268 -------------------------dg~i~i~d~~~~~~~~~~~~~~---~~~v~~~~~~~~~~~~l~~g~-~dg~i~vw 318 (420)
T 3vl1_A 268 -------------------------SGVITVHNVFSKEQTIQLPSKF---TCSCNSLTVDGNNANYIYAGY-ENGMLAQW 318 (420)
T ss_dssp -------------------------TSCEEEEETTTCCEEEEECCTT---SSCEEEEEECSSCTTEEEEEE-TTSEEEEE
T ss_pred -------------------------CCeEEEEECCCCceeEEccccc---CCCceeEEEeCCCCCEEEEEe-CCCeEEEE
Confidence 2346677775666665554321 23466666543 3 455555 46789999
Q ss_pred eCCCC
Q 018705 340 PLDGP 344 (351)
Q Consensus 340 ~~~~~ 344 (351)
++++.
T Consensus 319 d~~~~ 323 (420)
T 3vl1_A 319 DLRSP 323 (420)
T ss_dssp ETTCT
T ss_pred EcCCC
Confidence 98765
No 151
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=98.88 E-value=4.4e-07 Score=79.79 Aligned_cols=178 Identities=11% Similarity=0.020 Sum_probs=111.1
Q ss_pred CCCceEEEeeCCCeEEEEEcCCEEEEEEcCC-CeEEEEeecC--CccccceEEcCCCCEEEEeC-----CCCeEEEcC-C
Q 018705 52 NHPEDVSVVVSKGALYTATRDGWVKYFILHN-ETLVNWKHID--SQSLLGLTTTKDGGVILCDN-----EKGLLKVTE-E 122 (351)
Q Consensus 52 ~~pe~i~~d~~~g~lyv~~~~g~I~~~d~~~-g~~~~~~~~~--~~p~~gl~~d~~G~L~v~d~-----~~gl~~~~~-~ 122 (351)
....+++++|++..++++. ++.|+.+|..+ ++........ ..+. .++++++|+.+++.. ...++.++. +
T Consensus 42 ~~v~~~~~spdg~~l~~~~-~~~i~~~d~~~~~~~~~~~~~~~~~~~~-~~~~spdg~~l~~~~~~~~~~~~l~~~~~~~ 119 (297)
T 2ojh_A 42 ELFEAPNWSPDGKYLLLNS-EGLLYRLSLAGDPSPEKVDTGFATICNN-DHGISPDGALYAISDKVEFGKSAIYLLPSTG 119 (297)
T ss_dssp SCCEEEEECTTSSEEEEEE-TTEEEEEESSSCCSCEECCCTTCCCBCS-CCEECTTSSEEEEEECTTTSSCEEEEEETTC
T ss_pred cceEeeEECCCCCEEEEEc-CCeEEEEeCCCCCCceEecccccccccc-ceEECCCCCEEEEEEeCCCCcceEEEEECCC
Confidence 3567999997666666654 78999999987 7665543222 3456 899999997554433 235666664 4
Q ss_pred C-eEEecCCCCCcccEEEccCCc-EEEEeCCCccCCcccccccccccCCceEEEEeCCCCeEEEeecCccccceEEEcCC
Q 018705 123 G-VEAIVPDASFTNDVIAASDGT-LYFTVASTKYTPTDFYKDMAEGKPYGQLRKYDPKLKETTVLHEGFYFANGIALSKN 200 (351)
Q Consensus 123 g-~~~l~~~~~~~n~l~~d~dG~-ly~t~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~~~~~~~~~~~~~~ngi~~~~d 200 (351)
+ .+.+... ..++.+++++||. ++++.... ..-.||.++..+++...+.........++++|+
T Consensus 120 ~~~~~~~~~-~~~~~~~~spdg~~l~~~~~~~---------------~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~d 183 (297)
T 2ojh_A 120 GTPRLMTKN-LPSYWHGWSPDGKSFTYCGIRD---------------QVFDIYSMDIDSGVETRLTHGEGRNDGPDYSPD 183 (297)
T ss_dssp CCCEECCSS-SSEEEEEECTTSSEEEEEEEET---------------TEEEEEEEETTTCCEEECCCSSSCEEEEEECTT
T ss_pred CceEEeecC-CCccceEECCCCCEEEEEECCC---------------CceEEEEEECCCCcceEcccCCCccccceECCC
Confidence 4 5554433 3477789999996 55454320 012688888877777666555556788999999
Q ss_pred CCEEEEEec-ce--eEEeecCCCCceeEEeccCCCCCCceEECCCCCEEEE
Q 018705 201 EDFVVVCES-WK--RYWLKGDRAGILDAFIENLPGGPDNINLAPDGSFWIG 248 (351)
Q Consensus 201 g~~lyv~~~-~~--~~~i~~~~~~~~~~~~~~~~g~pd~i~~d~~G~lwva 248 (351)
++.++++.. .+ ++|.-+...+....+.. .......+.++++|+..+.
T Consensus 184 g~~l~~~~~~~~~~~i~~~~~~~~~~~~~~~-~~~~~~~~~~s~dg~~l~~ 233 (297)
T 2ojh_A 184 GRWIYFNSSRTGQMQIWRVRVDGSSVERITD-SAYGDWFPHPSPSGDKVVF 233 (297)
T ss_dssp SSEEEEEECTTSSCEEEEEETTSSCEEECCC-CSEEEEEEEECTTSSEEEE
T ss_pred CCEEEEEecCCCCccEEEECCCCCCcEEEec-CCcccCCeEECCCCCEEEE
Confidence 997777653 33 55544322233332221 1112334678999985443
No 152
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=98.88 E-value=2.1e-06 Score=80.07 Aligned_cols=131 Identities=11% Similarity=0.014 Sum_probs=85.0
Q ss_pred eeCCCeEEEEEc-----CCEEEEEEcCCCeEEEEeecCCccccceEEcCCC-CEEEEeC----------CCCeEEEcC-C
Q 018705 60 VVSKGALYTATR-----DGWVKYFILHNETLVNWKHIDSQSLLGLTTTKDG-GVILCDN----------EKGLLKVTE-E 122 (351)
Q Consensus 60 d~~~g~lyv~~~-----~g~I~~~d~~~g~~~~~~~~~~~p~~gl~~d~~G-~L~v~d~----------~~gl~~~~~-~ 122 (351)
.|+++.+|+... ++.|+.+|..++++..-...+..| +++++++| .||+++. .+.+..+|. +
T Consensus 41 ~pd~~~vyV~~~~~~~~~~~V~ViD~~t~~v~~~I~vG~~P--~va~spDG~~lyVan~~~~r~~~G~~~~~VsviD~~t 118 (386)
T 3sjl_D 41 APDARRVYVNDPAHFAAVTQQFVIDGEAGRVIGMIDGGFLP--NPVVADDGSFIAHASTVFSRIARGERTDYVEVFDPVT 118 (386)
T ss_dssp CCCTTEEEEEECGGGCSSEEEEEEETTTTEEEEEEEECSSC--EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTT
T ss_pred CCCCCEEEEEcCcccCCCCEEEEEECCCCeEEEEEECCCCC--cEEECCCCCEEEEEcccccccccCCCCCEEEEEECCC
Confidence 456788999875 579999999888875544555666 49999999 5999873 123666774 4
Q ss_pred C--eEEecCC-------CCCcccEEEccCC-cEEEEeCCCccCCcccccccccccCCceEEEEeCCCCeEEEeecC----
Q 018705 123 G--VEAIVPD-------ASFTNDVIAASDG-TLYFTVASTKYTPTDFYKDMAEGKPYGQLRKYDPKLKETTVLHEG---- 188 (351)
Q Consensus 123 g--~~~l~~~-------~~~~n~l~~d~dG-~ly~t~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~~~~~~~~~~---- 188 (351)
+ ...+... ...|..+++++|| .+|+++.. ..+.|..+|..++++......
T Consensus 119 ~~v~~~I~v~~g~r~~~g~~P~~~a~spDGk~lyVan~~----------------~~~~VsVID~~t~~vv~tI~v~g~~ 182 (386)
T 3sjl_D 119 LLPTADIELPDAPRFLVGTYPWMTSLTPDGKTLLFYQFS----------------PAPAVGVVDLEGKAFKRMLDVPDCY 182 (386)
T ss_dssp CCEEEEEEETTCCCCCBSCCGGGEEECTTSSEEEEEECS----------------SSCEEEEEETTTTEEEEEEECCSEE
T ss_pred CeEEEEEECCCccccccCCCCceEEEcCCCCEEEEEEcC----------------CCCeEEEEECCCCcEEEEEECCCcc
Confidence 4 3433221 1479999999999 58998742 124677777776665332211
Q ss_pred ccccce----EEEcCCCCEEEEEe
Q 018705 189 FYFANG----IALSKNEDFVVVCE 208 (351)
Q Consensus 189 ~~~~ng----i~~~~dg~~lyv~~ 208 (351)
..+|.| +++++||+.+|+..
T Consensus 183 ~~~P~g~~~~~~~~~DG~~~~v~~ 206 (386)
T 3sjl_D 183 HIFPTAPDTFFMHCRDGSLAKVAF 206 (386)
T ss_dssp EEEEEETTEEEEEETTSCEEEEEC
T ss_pred eeecCCCceeEEECCCCCEEEEEC
Confidence 123444 36666776666644
No 153
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=98.87 E-value=1e-06 Score=81.66 Aligned_cols=127 Identities=14% Similarity=0.119 Sum_probs=74.8
Q ss_pred CCceEEEEeCCCCeEEEeecCccccceEEEcCCCCEEEEEecce-eEEeecCCCCceeEEeccCCC-CCCceEECCCCCE
Q 018705 168 PYGQLRKYDPKLKETTVLHEGFYFANGIALSKNEDFVVVCESWK-RYWLKGDRAGILDAFIENLPG-GPDNINLAPDGSF 245 (351)
Q Consensus 168 ~~g~l~~~d~~~~~~~~~~~~~~~~ngi~~~~dg~~lyv~~~~~-~~~i~~~~~~~~~~~~~~~~g-~pd~i~~d~~G~l 245 (351)
..+.|+.+|+++|+...... .....+++.+ ++.+|++...+ .+.++ ...++..-....... ....... .+|+|
T Consensus 247 ~~g~l~~~d~~tG~~~w~~~-~~~~~~~~~~--~~~l~~~~~~g~l~~~d-~~tG~~~w~~~~~~~~~~~~~~~-~~~~l 321 (376)
T 3q7m_A 247 YNGNLTALDLRSGQIMWKRE-LGSVNDFIVD--GNRIYLVDQNDRVMALT-IDGGVTLWTQSDLLHRLLTSPVL-YNGNL 321 (376)
T ss_dssp TTSCEEEEETTTCCEEEEEC-CCCEEEEEEE--TTEEEEEETTCCEEEEE-TTTCCEEEEECTTTTSCCCCCEE-ETTEE
T ss_pred cCcEEEEEECCCCcEEeecc-CCCCCCceEE--CCEEEEEcCCCeEEEEE-CCCCcEEEeecccCCCcccCCEE-ECCEE
Confidence 35789999998887653322 2333445553 44699987665 33333 233443322211111 1122333 35789
Q ss_pred EEEEecCCchhhhhhhcChhHHHHHHhccchhhcccCCCCCCceEEEEEECCCCeEEEEEECCCCCcccceeEEEEECCE
Q 018705 246 WIGLIKMNQTGVRAIQKCREKWELLDAYPGLISLLLPMGSDAGARVVKVDGNDGKIIRDFNDPDATYISFVTSAAEFDGN 325 (351)
Q Consensus 246 wva~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~g~~~~~~~~~~g~~~~~~~~~~~~~g~ 325 (351)
|+++.. +.+..+|+++|+.+..+....+. ..+.....+++
T Consensus 322 ~v~~~~-------------------------------------g~l~~~d~~tG~~~~~~~~~~~~---~~~~~~~~~~~ 361 (376)
T 3q7m_A 322 VVGDSE-------------------------------------GYLHWINVEDGRFVAQQKVDSSG---FQTEPVAADGK 361 (376)
T ss_dssp EEECTT-------------------------------------SEEEEEETTTCCEEEEEECCTTC---BCSCCEEETTE
T ss_pred EEEeCC-------------------------------------CeEEEEECCCCcEEEEEecCCCc---ceeCCEEECCE
Confidence 998543 46999998789988777653322 22334456899
Q ss_pred EEEEecCCCeEEEEe
Q 018705 326 LYLASLQSNFIGILP 340 (351)
Q Consensus 326 L~ig~~~~~~i~~~~ 340 (351)
||+++. .+.|..++
T Consensus 362 l~v~~~-~G~l~~~~ 375 (376)
T 3q7m_A 362 LLIQAK-DGTVYSIT 375 (376)
T ss_dssp EEEEBT-TSCEEEEE
T ss_pred EEEEeC-CCEEEEEe
Confidence 999987 56687775
No 154
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=98.86 E-value=6.6e-07 Score=82.79 Aligned_cols=241 Identities=10% Similarity=0.044 Sum_probs=144.2
Q ss_pred CCceEEEee-CCCeEEEEEcCCEEEEEEcCCCeEEEEeecC---CccccceEEcCCCCEEEEeCCCCeEEEc-CCC--eE
Q 018705 53 HPEDVSVVV-SKGALYTATRDGWVKYFILHNETLVNWKHID---SQSLLGLTTTKDGGVILCDNEKGLLKVT-EEG--VE 125 (351)
Q Consensus 53 ~pe~i~~d~-~~g~lyv~~~~g~I~~~d~~~g~~~~~~~~~---~~p~~gl~~d~~G~L~v~d~~~gl~~~~-~~g--~~ 125 (351)
...++++.| ++..++++..+|.|..||..+.....+.... .... .+++.++++++++....+.+++. .++ ..
T Consensus 120 ~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~-~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~ 198 (383)
T 3ei3_B 120 AITGMKFNQFNTNQLFVSSIRGATTLRDFSGSVIQVFAKTDSWDYWYC-CVDVSVSRQMLATGDSTGRLLLLGLDGHEIF 198 (383)
T ss_dssp BEEEEEEETTEEEEEEEEETTTEEEEEETTSCEEEEEECCCCSSCCEE-EEEEETTTTEEEEEETTSEEEEEETTSCEEE
T ss_pred ceeEEEeCCCCCCEEEEEeCCCEEEEEECCCCceEEEeccCCCCCCeE-EEEECCCCCEEEEECCCCCEEEEECCCCEEE
Confidence 445889986 3467788899999999998766665554332 3356 89999999876665555666665 344 55
Q ss_pred EecCCCCCcccEEEccCCc-EEEEeCCCccCCcccccccccccCCceEEEEeCCC----CeEEEeecCccccceEEEcC-
Q 018705 126 AIVPDASFTNDVIAASDGT-LYFTVASTKYTPTDFYKDMAEGKPYGQLRKYDPKL----KETTVLHEGFYFANGIALSK- 199 (351)
Q Consensus 126 ~l~~~~~~~n~l~~d~dG~-ly~t~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~----~~~~~~~~~~~~~ngi~~~~- 199 (351)
.+......+.+++++++|. ++++.+. ++.|..||..+ ++.............++++|
T Consensus 199 ~~~~h~~~v~~~~~~~~~~~~l~s~~~-----------------d~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~s~~ 261 (383)
T 3ei3_B 199 KEKLHKAKVTHAEFNPRCDWLMATSSV-----------------DATVKLWDLRNIKDKNSYIAEMPHEKPVNAAYFNPT 261 (383)
T ss_dssp EEECSSSCEEEEEECSSCTTEEEEEET-----------------TSEEEEEEGGGCCSTTCEEEEEECSSCEEEEEECTT
T ss_pred EeccCCCcEEEEEECCCCCCEEEEEeC-----------------CCEEEEEeCCCCCcccceEEEecCCCceEEEEEcCC
Confidence 5544446789999999997 7776654 46788888765 44433333445677899999
Q ss_pred CCCEEEEEecce--eEEe-ecCCCCceeEEecc---C--CCCCCceEECCCCCEEEEEecCCchhhhhhhcChhHHHHHH
Q 018705 200 NEDFVVVCESWK--RYWL-KGDRAGILDAFIEN---L--PGGPDNINLAPDGSFWIGLIKMNQTGVRAIQKCREKWELLD 271 (351)
Q Consensus 200 dg~~lyv~~~~~--~~~i-~~~~~~~~~~~~~~---~--~g~pd~i~~d~~G~lwva~~~~~~~~~~~~~~~~~~~~~~~ 271 (351)
+++.++.+..++ ++|- .... ....+... . ...+-...+.+++.+......+....
T Consensus 262 ~~~~l~~~~~d~~i~iwd~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~s~dg~~--------------- 324 (383)
T 3ei3_B 262 DSTKLLTTDQRNEIRVYSSYDWS--KPDQIIIHPHRQFQHLTPIKATWHPMYDLIVAGRYPDDQL--------------- 324 (383)
T ss_dssp TSCEEEEEESSSEEEEEETTBTT--SCSEEEECCBCCCTTSCCCCCEECSSSSEEEEECBCCTTT---------------
T ss_pred CCCEEEEEcCCCcEEEEECCCCc--cccccccccccccccccceEEeccCCCCceEEEecCCccc---------------
Confidence 999777777665 4442 1111 11111110 0 01122245666666554443321110
Q ss_pred hccchhhcccCCCCCCceEEEEEECCCCeEEEEEECCCCCcccceeEEEEE-CCEEEEEecCCCeEEEEeCCC
Q 018705 272 AYPGLISLLLPMGSDAGARVVKVDGNDGKIIRDFNDPDATYISFVTSAAEF-DGNLYLASLQSNFIGILPLDG 343 (351)
Q Consensus 272 ~~~~~~~~~~~~~~~~~~~v~~~~~~~g~~~~~~~~~~g~~~~~~~~~~~~-~g~L~ig~~~~~~i~~~~~~~ 343 (351)
.+...+.|..+|..+++.+..+..+.. ...++.+... ++++.++.. .+.|..+++.+
T Consensus 325 ------------s~s~d~~i~iwd~~~~~~~~~l~~~~~--~~~~~~~~~s~~g~~l~s~s-d~~i~iw~~~~ 382 (383)
T 3ei3_B 325 ------------LLNDKRTIDIYDANSGGLVHQLRDPNA--AGIISLNKFSPTGDVLASGM-GFNILIWNRED 382 (383)
T ss_dssp ------------CTTCCCCEEEEETTTCCEEEEECBTTB--CSCCCEEEECTTSSEEEEEE-TTEEEEEECC-
T ss_pred ------------ccCCCCeEEEEecCCCceeeeecCCCC--CceEEEEEEecCccEEEEec-CCcEEEEecCC
Confidence 013445688889767888888864321 1234554444 344434433 67888888764
No 155
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=98.86 E-value=1.2e-06 Score=81.15 Aligned_cols=215 Identities=15% Similarity=0.131 Sum_probs=123.9
Q ss_pred CCCeEEEEEcCCEEEEEEcCCCeEEEEeecCCccccceEEcCCCCEEEEeCCCCeEEEcC-CC-eE-EecCCC-----CC
Q 018705 62 SKGALYTATRDGWVKYFILHNETLVNWKHIDSQSLLGLTTTKDGGVILCDNEKGLLKVTE-EG-VE-AIVPDA-----SF 133 (351)
Q Consensus 62 ~~g~lyv~~~~g~I~~~d~~~g~~~~~~~~~~~p~~gl~~d~~G~L~v~d~~~gl~~~~~-~g-~~-~l~~~~-----~~ 133 (351)
.++.+|+++.++.|+.+|.++|+..-.............+ .+|.+|++...+.++.++. +| .. ...... ..
T Consensus 102 ~~~~v~v~~~~g~l~a~d~~tG~~~W~~~~~~~~~~~p~~-~~~~v~v~~~~g~l~~~d~~tG~~~W~~~~~~~~~~~~~ 180 (376)
T 3q7m_A 102 SGGHVYIGSEKAQVYALNTSDGTVAWQTKVAGEALSRPVV-SDGLVLIHTSNGQLQALNEADGAVKWTVNLDMPSLSLRG 180 (376)
T ss_dssp ETTEEEEEETTSEEEEEETTTCCEEEEEECSSCCCSCCEE-ETTEEEEECTTSEEEEEETTTCCEEEEEECCC-----CC
T ss_pred eCCEEEEEcCCCEEEEEECCCCCEEEEEeCCCceEcCCEE-ECCEEEEEcCCCeEEEEECCCCcEEEEEeCCCCceeecC
Confidence 4789999999999999999888764222222222202223 4678999887777999995 77 22 221111 01
Q ss_pred cccEEEccCCcEEEEeCCCccCCcccccccccccCCceEEEEeCCCCeEEEeecCcccc-------------ceEEEcCC
Q 018705 134 TNDVIAASDGTLYFTVASTKYTPTDFYKDMAEGKPYGQLRKYDPKLKETTVLHEGFYFA-------------NGIALSKN 200 (351)
Q Consensus 134 ~n~l~~d~dG~ly~t~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~~~~~~~~~~~~~~-------------ngi~~~~d 200 (351)
....+++ +|.+|+... .+.|+.+|+++|+....... ..+ ....+ .+
T Consensus 181 ~~~~~~~-~~~v~~g~~------------------~g~l~~~d~~tG~~~w~~~~-~~~~~~~~~~~~~~~~~~p~~-~~ 239 (376)
T 3q7m_A 181 ESAPTTA-FGAAVVGGD------------------NGRVSAVLMEQGQMIWQQRI-SQATGSTEIDRLSDVDTTPVV-VN 239 (376)
T ss_dssp CCCCEEE-TTEEEECCT------------------TTEEEEEETTTCCEEEEEEC-CC-----------CCCCCCEE-ET
T ss_pred CCCcEEE-CCEEEEEcC------------------CCEEEEEECCCCcEEEEEec-ccCCCCcccccccccCCCcEE-EC
Confidence 1223333 667887543 36799999888876432211 111 11112 23
Q ss_pred CCEEEEEecce-eEEeecCCCCceeEEeccCCCCCCceEECCCCCEEEEEecCCchhhhhhhcChhHHHHHHhccchhhc
Q 018705 201 EDFVVVCESWK-RYWLKGDRAGILDAFIENLPGGPDNINLAPDGSFWIGLIKMNQTGVRAIQKCREKWELLDAYPGLISL 279 (351)
Q Consensus 201 g~~lyv~~~~~-~~~i~~~~~~~~~~~~~~~~g~pd~i~~d~~G~lwva~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 279 (351)
..+|++...+ .+.++ ...++..-.. .... ...+..+ ++++|+++..
T Consensus 240 -~~v~~~~~~g~l~~~d-~~tG~~~w~~-~~~~-~~~~~~~-~~~l~~~~~~---------------------------- 286 (376)
T 3q7m_A 240 -GVVFALAYNGNLTALD-LRSGQIMWKR-ELGS-VNDFIVD-GNRIYLVDQN---------------------------- 286 (376)
T ss_dssp -TEEEEECTTSCEEEEE-TTTCCEEEEE-CCCC-EEEEEEE-TTEEEEEETT----------------------------
T ss_pred -CEEEEEecCcEEEEEE-CCCCcEEeec-cCCC-CCCceEE-CCEEEEEcCC----------------------------
Confidence 3588876555 33333 2234432211 1111 2334454 6789998643
Q ss_pred ccCCCCCCceEEEEEECCCCeEEEEEECCCCCcccceeEEEEECCEEEEEecCCCeEEEEeCCCC
Q 018705 280 LLPMGSDAGARVVKVDGNDGKIIRDFNDPDATYISFVTSAAEFDGNLYLASLQSNFIGILPLDGP 344 (351)
Q Consensus 280 ~~~~~~~~~~~v~~~~~~~g~~~~~~~~~~g~~~~~~~~~~~~~g~L~ig~~~~~~i~~~~~~~~ 344 (351)
+.+.++|+++|+..-....... ...++....++.||+++. .+.+..++..+-
T Consensus 287 ---------g~l~~~d~~tG~~~w~~~~~~~---~~~~~~~~~~~~l~v~~~-~g~l~~~d~~tG 338 (376)
T 3q7m_A 287 ---------DRVMALTIDGGVTLWTQSDLLH---RLLTSPVLYNGNLVVGDS-EGYLHWINVEDG 338 (376)
T ss_dssp ---------CCEEEEETTTCCEEEEECTTTT---SCCCCCEEETTEEEEECT-TSEEEEEETTTC
T ss_pred ---------CeEEEEECCCCcEEEeecccCC---CcccCCEEECCEEEEEeC-CCeEEEEECCCC
Confidence 3589999878887655542222 223344456899999986 567888886543
No 156
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=98.84 E-value=4.8e-08 Score=90.28 Aligned_cols=139 Identities=14% Similarity=0.154 Sum_probs=97.1
Q ss_pred CCCceEEEeeC-CC--eEEEEEcCC-----EEEEEEcCCCeEEEEee----cCCccccceEEcCCCCEEEEeCC------
Q 018705 52 NHPEDVSVVVS-KG--ALYTATRDG-----WVKYFILHNETLVNWKH----IDSQSLLGLTTTKDGGVILCDNE------ 113 (351)
Q Consensus 52 ~~pe~i~~d~~-~g--~lyv~~~~g-----~I~~~d~~~g~~~~~~~----~~~~p~~gl~~d~~G~L~v~d~~------ 113 (351)
..|-+|.+.++ ++ +||+..+.. .|++++..++..+.... ...+|+ .++++++|++|+++..
T Consensus 112 f~PhGi~~~~d~dg~~~L~Vvnh~~~~s~ielf~~d~~~~~~~~~~~~~g~~~~~pN-D~~v~~~G~fyvt~~~~ftd~~ 190 (355)
T 3sre_A 112 FNPHGISTFIDDDNTVYLLVVNHPGSSSTVEVFKFQEEEKSLLHLKTIRHKLLPSVN-DIVAVGPEHFYATNDHYFIDPY 190 (355)
T ss_dssp CCEEEEEEEECTTCCEEEEEEECSTTCCEEEEEEEETTTTEEEEEEEECCTTCSSEE-EEEEEETTEEEEEESCSCSSHH
T ss_pred eeeeeeEEEECCCCcEEEEEEECCCCCCeEEEEEEECCCCEEEEEeccccCCCCCCc-eEEEeCCCCEEecCCcEeCCcc
Confidence 47889988652 33 688876532 47888886555544332 235689 9999999999998751
Q ss_pred ------------CCeEEEcCCCeEEecCCCCCcccEEEccCC-cEEEEeCCCccCCcccccccccccCCceEEEEeCC-C
Q 018705 114 ------------KGLLKVTEEGVEAIVPDASFTNDVIAASDG-TLYFTVASTKYTPTDFYKDMAEGKPYGQLRKYDPK-L 179 (351)
Q Consensus 114 ------------~gl~~~~~~g~~~l~~~~~~~n~l~~d~dG-~ly~t~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~-~ 179 (351)
..++++++...+.+.+....||+|+++||| .+|++++. .++|++|+.+ .
T Consensus 191 ~~~~e~~~~~~~g~vyr~d~~~~~~~~~~l~~pNGia~spDg~~lYvadt~-----------------~~~I~~~~~~~~ 253 (355)
T 3sre_A 191 LKSWEMHLGLAWSFVTYYSPNDVRVVAEGFDFANGINISPDGKYVYIAELL-----------------AHKIHVYEKHAN 253 (355)
T ss_dssp HHHHHHHTTCCCEEEEEECTTCCEEEEEEESSEEEEEECTTSSEEEEEEGG-----------------GTEEEEEEECTT
T ss_pred cccchhhccCCccEEEEEECCeEEEeecCCcccCcceECCCCCEEEEEeCC-----------------CCeEEEEEECCC
Confidence 357888763355566666899999999998 79999976 3578888743 2
Q ss_pred CeEEE--eecCccccceEEEcC-CCCEEEEEec
Q 018705 180 KETTV--LHEGFYFANGIALSK-NEDFVVVCES 209 (351)
Q Consensus 180 ~~~~~--~~~~~~~~ngi~~~~-dg~~lyv~~~ 209 (351)
+++.. .......|+|+++++ +|+ +|++..
T Consensus 254 g~l~~~~~~~~~g~PDGi~vD~e~G~-lwva~~ 285 (355)
T 3sre_A 254 WTLTPLRVLSFDTLVDNISVDPVTGD-LWVGCH 285 (355)
T ss_dssp SCEEEEEEEECSSEEEEEEECTTTCC-EEEEEE
T ss_pred CcEecCEEEeCCCCCceEEEeCCCCc-EEEEec
Confidence 43321 123346799999999 598 999653
No 157
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=98.84 E-value=4.7e-06 Score=74.86 Aligned_cols=230 Identities=10% Similarity=0.051 Sum_probs=141.2
Q ss_pred CceEEEeeCCCeEEEEEcCCEEEEEEcCCCeE-EEEeecCCccccceEEcCCCCEEEEeCCCCeEEEc--CCC---eEEe
Q 018705 54 PEDVSVVVSKGALYTATRDGWVKYFILHNETL-VNWKHIDSQSLLGLTTTKDGGVILCDNEKGLLKVT--EEG---VEAI 127 (351)
Q Consensus 54 pe~i~~d~~~g~lyv~~~~g~I~~~d~~~g~~-~~~~~~~~~p~~gl~~d~~G~L~v~d~~~gl~~~~--~~g---~~~l 127 (351)
-.++++.+++..+.++..|+.|..||..+++. ..+........ .+++.+++.++++....+.++++ .++ ...+
T Consensus 58 v~~~~~~~~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~h~~~v~-~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~ 136 (304)
T 2ynn_A 58 VRAGKFIARKNWIIVGSDDFRIRVFNYNTGEKVVDFEAHPDYIR-SIAVHPTKPYVLSGSDDLTVKLWNWENNWALEQTF 136 (304)
T ss_dssp EEEEEEEGGGTEEEEEETTSEEEEEETTTCCEEEEEECCSSCEE-EEEECSSSSEEEEEETTSCEEEEEGGGTTEEEEEE
T ss_pred EEEEEEeCCCCEEEEECCCCEEEEEECCCCcEEEEEeCCCCcEE-EEEEcCCCCEEEEECCCCeEEEEECCCCcchhhhh
Confidence 35778887788899999999999999887765 34444445566 89999999877766666777776 233 2334
Q ss_pred cCCCCCcccEEEcc-CCcEEEEeCCCccCCcccccccccccCCceEEEEeCCCCeEE-Eee-cCccccceEEEcC--CCC
Q 018705 128 VPDASFTNDVIAAS-DGTLYFTVASTKYTPTDFYKDMAEGKPYGQLRKYDPKLKETT-VLH-EGFYFANGIALSK--NED 202 (351)
Q Consensus 128 ~~~~~~~n~l~~d~-dG~ly~t~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~~~~~-~~~-~~~~~~ngi~~~~--dg~ 202 (351)
......+++++++| ++.++++.+. ++.|..||..+++.. .+. ......+.+.+++ ++.
T Consensus 137 ~~h~~~v~~v~~~p~~~~~l~sgs~-----------------D~~v~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~ 199 (304)
T 2ynn_A 137 EGHEHFVMCVAFNPKDPSTFASGCL-----------------DRTVKVWSLGQSTPNFTLTTGQERGVNYVDYYPLPDKP 199 (304)
T ss_dssp CCCCSCEEEEEECTTCTTEEEEEET-----------------TSEEEEEETTCSSCSEEEECCCTTCEEEEEECCSTTCC
T ss_pred cccCCcEEEEEECCCCCCEEEEEeC-----------------CCeEEEEECCCCCccceeccCCcCcEEEEEEEEcCCCC
Confidence 43346788999998 5677776554 467888887544321 111 1122345566765 666
Q ss_pred EEEEEecce--eEEeecCCCCce-eEEeccCCCCCCceEECCCCCEEEEEecCCchhhhhhhcChhHHHHHHhccchhhc
Q 018705 203 FVVVCESWK--RYWLKGDRAGIL-DAFIENLPGGPDNINLAPDGSFWIGLIKMNQTGVRAIQKCREKWELLDAYPGLISL 279 (351)
Q Consensus 203 ~lyv~~~~~--~~~i~~~~~~~~-~~~~~~~~g~pd~i~~d~~G~lwva~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 279 (351)
.|..+..++ ++| +...++. ..+. ........+++.+++.+.++...
T Consensus 200 ~l~s~s~D~~i~iW--d~~~~~~~~~~~-~h~~~v~~~~~~p~~~~l~s~s~---------------------------- 248 (304)
T 2ynn_A 200 YMITASDDLTIKIW--DYQTKSCVATLE-GHMSNVSFAVFHPTLPIIISGSE---------------------------- 248 (304)
T ss_dssp EEEEEETTSEEEEE--ETTTTEEEEEEE-CCSSCEEEEEECSSSSEEEEEET----------------------------
T ss_pred EEEEEcCCCeEEEE--eCCCCccceeeC-CCCCCEEEEEECCCCCEEEEEcC----------------------------
Confidence 666666555 555 2222222 2222 22222344678888887666543
Q ss_pred ccCCCCCCceEEEEEECCCCeEEEEEECCCCCcccceeEEEEE--CCEEEEEecCCCeEEEEeCCCC
Q 018705 280 LLPMGSDAGARVVKVDGNDGKIIRDFNDPDATYISFVTSAAEF--DGNLYLASLQSNFIGILPLDGP 344 (351)
Q Consensus 280 ~~~~~~~~~~~v~~~~~~~g~~~~~~~~~~g~~~~~~~~~~~~--~g~L~ig~~~~~~i~~~~~~~~ 344 (351)
.+.|..+|.++++.+..+..+.+ .+.++..+ ++..|+.+...+++..+.+...
T Consensus 249 --------Dg~i~iWd~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~asg~~~g~~~~~~~~~ 303 (304)
T 2ynn_A 249 --------DGTLKIWNSSTYKVEKTLNVGLE----RSWCIATHPTGRKNYIASGFDNGFTVLSLGND 303 (304)
T ss_dssp --------TSCEEEEETTTCCEEEEECCSSS----SEEEEEECTTCGGGCEEEEETTEEEEEECC--
T ss_pred --------CCeEEEEECCCCceeeeccCCCc----cEEEEEECCCCCceEEEEecCCceEEEEeccC
Confidence 23467778867788877754332 34455533 3344455555788888887654
No 158
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=98.83 E-value=2.3e-06 Score=79.62 Aligned_cols=235 Identities=10% Similarity=0.114 Sum_probs=145.8
Q ss_pred CCceEEEeeCCCeEEEEEcCCEEEEEEcCC----C-eEEEEeecCCccccceEEcCC-CCEEEEeCCCCeEEEcC--CCe
Q 018705 53 HPEDVSVVVSKGALYTATRDGWVKYFILHN----E-TLVNWKHIDSQSLLGLTTTKD-GGVILCDNEKGLLKVTE--EGV 124 (351)
Q Consensus 53 ~pe~i~~d~~~g~lyv~~~~g~I~~~d~~~----g-~~~~~~~~~~~p~~gl~~d~~-G~L~v~d~~~gl~~~~~--~g~ 124 (351)
...++++++++..++++..+|.|..|+..+ . ....+........ .+++.++ ++++++....+.+++.. ++.
T Consensus 69 ~v~~~~~s~~~~~l~~~~~dg~v~vw~~~~~~~~~~~~~~~~~h~~~v~-~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~ 147 (416)
T 2pm9_A 69 KFNDLDWSHNNKIIAGALDNGSLELYSTNEANNAINSMARFSNHSSSVK-TVKFNAKQDNVLASGGNNGEIFIWDMNKCT 147 (416)
T ss_dssp CEEEEEECSSSSCEEEEESSSCEEEECCSSTTSCCCEEEECCCSSSCCC-EEEECSSSTTBEEEECSSSCEEBCBTTTTS
T ss_pred ceEEEEECCCCCeEEEEccCCeEEEeecccccccccchhhccCCccceE-EEEEcCCCCCEEEEEcCCCeEEEEECCCCc
Confidence 345889998778888999999999999865 1 3333333444566 8999988 77666665666666652 222
Q ss_pred ------EEecC-----CCCCcccEEEccC-CcEEEEeCCCccCCcccccccccccCCceEEEEeCCCCeEEEeecC----
Q 018705 125 ------EAIVP-----DASFTNDVIAASD-GTLYFTVASTKYTPTDFYKDMAEGKPYGQLRKYDPKLKETTVLHEG---- 188 (351)
Q Consensus 125 ------~~l~~-----~~~~~n~l~~d~d-G~ly~t~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~~~~~~~~~~---- 188 (351)
..+.. ....+.+++++++ +.++++.+. +|.|..||..+++.......
T Consensus 148 ~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~-----------------dg~v~iwd~~~~~~~~~~~~~~~~ 210 (416)
T 2pm9_A 148 ESPSNYTPLTPGQSMSSVDEVISLAWNQSLAHVFASAGS-----------------SNFASIWDLKAKKEVIHLSYTSPN 210 (416)
T ss_dssp SCTTTCCCBCCCCSCCSSCCCCEEEECSSCTTEEEEESS-----------------SSCEEEEETTTTEEEEEECCCCCS
T ss_pred cccccccccccccccCCCCCeeEEEeCCCCCcEEEEEcC-----------------CCCEEEEECCCCCcceEEeccccc
Confidence 22211 1257889999998 577777654 46799999887765443332
Q ss_pred ---ccccceEEEcCCCC-EEEEEecc----e-eEE-eecCCCCceeEEeccCCCCCCceEECC-CCCEEEEEecCCchhh
Q 018705 189 ---FYFANGIALSKNED-FVVVCESW----K-RYW-LKGDRAGILDAFIENLPGGPDNINLAP-DGSFWIGLIKMNQTGV 257 (351)
Q Consensus 189 ---~~~~ngi~~~~dg~-~lyv~~~~----~-~~~-i~~~~~~~~~~~~~~~~g~pd~i~~d~-~G~lwva~~~~~~~~~ 257 (351)
......++++|++. .++.+..+ . ++| +.... .....+.....+....+++++ +|++.++...
T Consensus 211 ~~~~~~v~~~~~~~~~~~~l~~~~~d~~~~~i~~~d~~~~~-~~~~~~~~~~~~~v~~~~~s~~~~~~l~s~~~------ 283 (416)
T 2pm9_A 211 SGIKQQLSVVEWHPKNSTRVATATGSDNDPSILIWDLRNAN-TPLQTLNQGHQKGILSLDWCHQDEHLLLSSGR------ 283 (416)
T ss_dssp SCCCCCEEEEEECSSCTTEEEEEECCSSSCCCCEEETTSTT-SCSBCCCSCCSSCEEEEEECSSCSSCEEEEES------
T ss_pred cccCCceEEEEECCCCCCEEEEEECCCCCceEEEEeCCCCC-CCcEEeecCccCceeEEEeCCCCCCeEEEEeC------
Confidence 34567899999974 55555544 3 344 22110 111111101122345578887 7776666543
Q ss_pred hhhhcChhHHHHHHhccchhhcccCCCCCCceEEEEEECCCCeEEEEEECCCCCcccceeEEEEEC-C-EEEEEecCCCe
Q 018705 258 RAIQKCREKWELLDAYPGLISLLLPMGSDAGARVVKVDGNDGKIIRDFNDPDATYISFVTSAAEFD-G-NLYLASLQSNF 335 (351)
Q Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~g~~~~~~~~~~g~~~~~~~~~~~~~-g-~L~ig~~~~~~ 335 (351)
.+.|..+|..+++.+..+..+.+ .++++.... + .+++.....+.
T Consensus 284 ------------------------------dg~v~~wd~~~~~~~~~~~~~~~----~v~~~~~s~~~~~~l~s~~~d~~ 329 (416)
T 2pm9_A 284 ------------------------------DNTVLLWNPESAEQLSQFPARGN----WCFKTKFAPEAPDLFACASFDNK 329 (416)
T ss_dssp ------------------------------SSEEEEECSSSCCEEEEEECSSS----CCCCEEECTTCTTEEEECCSSSE
T ss_pred ------------------------------CCCEEEeeCCCCccceeecCCCC----ceEEEEECCCCCCEEEEEecCCc
Confidence 23577778767888888876443 355565543 3 45555555788
Q ss_pred EEEEeCCCCCC
Q 018705 336 IGILPLDGPEP 346 (351)
Q Consensus 336 i~~~~~~~~~~ 346 (351)
|..+++....+
T Consensus 330 i~iw~~~~~~~ 340 (416)
T 2pm9_A 330 IEVQTLQNLTN 340 (416)
T ss_dssp EEEEESCCCCC
T ss_pred EEEEEccCCCC
Confidence 99999877643
No 159
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=98.83 E-value=2e-07 Score=84.53 Aligned_cols=177 Identities=10% Similarity=0.031 Sum_probs=110.9
Q ss_pred CCceEEE---eeCCCeEEEEEc--------------CCEEEEEEcC---CCeEEEEeec--------------CCccccc
Q 018705 53 HPEDVSV---VVSKGALYTATR--------------DGWVKYFILH---NETLVNWKHI--------------DSQSLLG 98 (351)
Q Consensus 53 ~pe~i~~---d~~~g~lyv~~~--------------~g~I~~~d~~---~g~~~~~~~~--------------~~~p~~g 98 (351)
.|.+|.+ |++ ++||+... +..++++|+. +++....... ...++ +
T Consensus 64 ~~sGl~~~~~D~~-grL~vv~~~~~af~~~g~~~~g~~~v~~~Dl~~~~tg~~~~~~dL~~~~~~~~~~~g~~~~~~n-D 141 (334)
T 2p9w_A 64 QMSGLSLLTHDNS-KRLFAVMKNAKSFNFADQSSHGASSFHSFNLPLSENSKPVWSVNFEKVQDEFEKKAGKRPFGVV-Q 141 (334)
T ss_dssp EEEEEEESSSSSC-CEEEEEEEETTTTCTTSCCSSSCCEEEEEESSCCTTCCCSEEEESHHHHHHHHHHHSSCCEEEE-E
T ss_pred eeeEEEEeccCCC-CcEEEEEcccccccccccccCCCCEEEEEcCCcCCCCCEEEEecCccccccccccccccccCCc-e
Confidence 4679999 754 88887432 5789999987 5655332211 12377 9
Q ss_pred eEEcCCCCEEEEeCC--CCeEEEcCCC--eEEecCC------CCCcccEEEccCCcEEEEeCCCccCCcccccccccccC
Q 018705 99 LTTTKDGGVILCDNE--KGLLKVTEEG--VEAIVPD------ASFTNDVIAASDGTLYFTVASTKYTPTDFYKDMAEGKP 168 (351)
Q Consensus 99 l~~d~~G~L~v~d~~--~gl~~~~~~g--~~~l~~~------~~~~n~l~~d~dG~ly~t~~~~~~~~~~~~~~~~~~~~ 168 (351)
+++|++|+.||++.. ..|++++++| ...+... ...+|+|++.|||++++....
T Consensus 142 vavD~~GnaYVt~s~~~~~I~rV~pdG~~~~~~~~~~~~~~~~~G~nGIv~~pdg~~Liv~~~----------------- 204 (334)
T 2p9w_A 142 SAQDRDGNSYVAFALGMPAIARVSADGKTVSTFAWESGNGGQRPGYSGITFDPHSNKLIAFGG----------------- 204 (334)
T ss_dssp EEECTTSCEEEEEEESSCEEEEECTTSCCEEEEEECCCCSSSCCSCSEEEEETTTTEEEEESS-----------------
T ss_pred eEECCCCCEEEeCCCCCCeEEEEeCCCCEEeeeeecCCCcccccCcceEEEeCCCCEEEEEcC-----------------
Confidence 999999999997643 4599999988 4433211 146899999999965544432
Q ss_pred CceEEEEeCCCCeEE--Eeec------CccccceE-EEcCCCCEEEEEecce-eEEeecC-CCCceeEEeccCCC--CCC
Q 018705 169 YGQLRKYDPKLKETT--VLHE------GFYFANGI-ALSKNEDFVVVCESWK-RYWLKGD-RAGILDAFIENLPG--GPD 235 (351)
Q Consensus 169 ~g~l~~~d~~~~~~~--~~~~------~~~~~ngi-~~~~dg~~lyv~~~~~-~~~i~~~-~~~~~~~~~~~~~g--~pd 235 (351)
.|+|++||.++ ... .-.. .+..++|| +...+|+.|+|++..+ ++.+.+. .-.+.+.... .++ .+.
T Consensus 205 ~g~L~~fD~~~-pv~~~v~~~~~G~~~~~~~~dgilp~~~~G~vllV~~~~~~~~~l~S~DgW~sa~~~g~-~~~~~~~~ 282 (334)
T 2p9w_A 205 PRALTAFDVSK-PYAWPEPVKINGDFGTLSGTEKIVTVPVGNESVLVGARAPYAISFRSWDNWKSANIKKT-KRSELQNS 282 (334)
T ss_dssp SSSEEEEECSS-SSCCCEECEESSCCCCCTTEEEEEEEEETTEEEEEEEETTEEEEEECSSTTSEEEEEEE-ECGGGGSS
T ss_pred CCeEEEEcCCC-CcceeecccccCCcccccCcccccccccCCEEEEEEcCCCCEEEEECCCCcceeEEeee-ecCccccC
Confidence 36899999763 222 1111 35678896 5556888778887554 4444321 1222222211 121 156
Q ss_pred ceEEC------CCCCEEEEEe
Q 018705 236 NINLA------PDGSFWIGLI 250 (351)
Q Consensus 236 ~i~~d------~~G~lwva~~ 250 (351)
+++.+ .++++|+...
T Consensus 283 g~tt~t~~~~~~~~~iYvv~~ 303 (334)
T 2p9w_A 283 GFTAVADYYQGSEQGLYAVSA 303 (334)
T ss_dssp CEEEEEEEEETTEEEEEEEEC
T ss_pred ceeEEEEeccccCCeEEEEee
Confidence 77665 6788999864
No 160
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=98.83 E-value=1e-06 Score=88.94 Aligned_cols=138 Identities=10% Similarity=0.003 Sum_probs=91.5
Q ss_pred CCCceEEEeeCCCeEEEEEc-CC-----EEEEEEcCCCeEEEEeecC-C------------------------ccccceE
Q 018705 52 NHPEDVSVVVSKGALYTATR-DG-----WVKYFILHNETLVNWKHID-S------------------------QSLLGLT 100 (351)
Q Consensus 52 ~~pe~i~~d~~~g~lyv~~~-~g-----~I~~~d~~~g~~~~~~~~~-~------------------------~p~~gl~ 100 (351)
..+.+++++|++..++.+.. ++ .|+.+|..+++.+...... . ... .++
T Consensus 37 ~~~~~~~~SpdG~~la~~~~~d~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~-~~~ 115 (741)
T 2ecf_A 37 PTLMKPKVAPDGSRVTFLRGKDSDRNQLDLWSYDIGSGQTRLLVDSKVVLPGTETLSDEEKARRERQRIAAMTGIV-DYQ 115 (741)
T ss_dssp CCCEEEEECTTSSEEEEEECCSSCTTEEEEEEEETTTCCEEEEECGGGTC--------------------CCEESC-CCE
T ss_pred CCCCCceEecCCCEEEEEeccCCCCcccEEEEEECCCCceeEccchhhcccccccccchhhhhhhhhhhccccCcc-eeE
Confidence 35678999987777877776 77 8999999888765543221 1 145 899
Q ss_pred EcCCCCEEEEeCCCCeEEEcC-CC----eEEecCCCCCcccEEEccCCc-EEEEeCCCccCCcccccccccccCCceEEE
Q 018705 101 TTKDGGVILCDNEKGLLKVTE-EG----VEAIVPDASFTNDVIAASDGT-LYFTVASTKYTPTDFYKDMAEGKPYGQLRK 174 (351)
Q Consensus 101 ~d~~G~L~v~d~~~gl~~~~~-~g----~~~l~~~~~~~n~l~~d~dG~-ly~t~~~~~~~~~~~~~~~~~~~~~g~l~~ 174 (351)
+++||+.++......++.++. ++ .+.+......+.+++++|||+ |.++.. +.|+.
T Consensus 116 ~SpDg~~l~~~~~~~i~~~d~~~~~~~~~~~l~~~~~~~~~~~~SPDG~~la~~~~-------------------~~i~~ 176 (741)
T 2ecf_A 116 WSPDAQRLLFPLGGELYLYDLKQEGKAAVRQLTHGEGFATDAKLSPKGGFVSFIRG-------------------RNLWV 176 (741)
T ss_dssp ECTTSSEEEEEETTEEEEEESSSCSTTSCCBCCCSSSCEEEEEECTTSSEEEEEET-------------------TEEEE
T ss_pred ECCCCCEEEEEeCCcEEEEECCCCCcceEEEcccCCcccccccCCCCCCEEEEEeC-------------------CcEEE
Confidence 999997544333355666663 22 122222225678899999996 444432 37999
Q ss_pred EeCCCCeEEEeecCccc-----------------cceEEEcCCCCEEEEEec
Q 018705 175 YDPKLKETTVLHEGFYF-----------------ANGIALSKNEDFVVVCES 209 (351)
Q Consensus 175 ~d~~~~~~~~~~~~~~~-----------------~ngi~~~~dg~~lyv~~~ 209 (351)
+|.++++...+...... +.++++||||+.|+++..
T Consensus 177 ~d~~~g~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~SpDg~~l~~~~~ 228 (741)
T 2ecf_A 177 IDLASGRQMQLTADGSTTIGNGIAEFVADEEMDRHTGYWWAPDDSAIAYARI 228 (741)
T ss_dssp EETTTTEEEECCCCCCSSEEESCCCHHHHHHSCCCCSEEECTTSSCEEEEEE
T ss_pred EecCCCCEEEeccCCccceeccccceeeeeccccccceEECCCCCEEEEEEE
Confidence 99888877655432221 467999999998877643
No 161
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=98.82 E-value=1.4e-07 Score=90.51 Aligned_cols=163 Identities=13% Similarity=0.212 Sum_probs=103.8
Q ss_pred ceEecCCCcCCCceEEEeeCC-CeEEEEEcCCEEEEEEcCCCeE-EEEe-------ec-----CCccccceEEcCC----
Q 018705 43 LTKLGEGCVNHPEDVSVVVSK-GALYTATRDGWVKYFILHNETL-VNWK-------HI-----DSQSLLGLTTTKD---- 104 (351)
Q Consensus 43 ~~~i~~~~~~~pe~i~~d~~~-g~lyv~~~~g~I~~~d~~~g~~-~~~~-------~~-----~~~p~~gl~~d~~---- 104 (351)
+++++.+ +..|.+|++.|++ +++||+...|+|++++..+... +.+. .. ..-+. ||+++++
T Consensus 6 v~~va~g-L~~P~~~a~~pdG~~rl~V~er~G~i~~~~~~g~~~~~~~~~~~~~~~~g~~~~~e~Gll-gia~~P~f~~n 83 (463)
T 2wg3_C 6 IQEVVSG-LRQPVGALHSGDGSQRLFILEKEGYVKILTPEGEIFKEPYLDIHKLVQSGIKGGDERGLL-SLAFHPNYKKN 83 (463)
T ss_dssp EEEEEEE-ESSEEEEECCSSSSCCEEEEETTTEEEEECTTSCBCSSCSEECTTTBCCCCSSSCCCSEE-EEEECTTHHHH
T ss_pred EEEeccC-CCCceEEEECCCCCeEEEEEeCCceEEEEeCCCCeeeeeecCCcceeccCccccCCCcce-eeEeCCCCcCC
Confidence 4667766 8899999999765 3799999999999998632211 1111 10 23356 8999985
Q ss_pred CCEEEEeCC-------------CCeEEEcC-C--------C-eEEecC-----CCCCcccEEEccCCcEEEEeCCCccCC
Q 018705 105 GGVILCDNE-------------KGLLKVTE-E--------G-VEAIVP-----DASFTNDVIAASDGTLYFTVASTKYTP 156 (351)
Q Consensus 105 G~L~v~d~~-------------~gl~~~~~-~--------g-~~~l~~-----~~~~~n~l~~d~dG~ly~t~~~~~~~~ 156 (351)
+.|||+-.. ..|.++.. + . .+++.. .......|+++|||.|||+........
T Consensus 84 ~~lYv~yt~~~~~~~~~~~~~~~~v~r~~~~~~~~~~~d~~~~~~i~~~~~~~~~H~g~~l~fgpDG~LYv~~Gd~~~~~ 163 (463)
T 2wg3_C 84 GKLYVSYTTNQERWAIGPHDHILRVVEYTVSRKNPHQVDLRTARVFLEVAELHRKHLGGQLLFGPDGFLYIILGDGMITL 163 (463)
T ss_dssp CEEEEEEEECCCSSCSSSSCEEEEEEEEEBCTTCTTSBCGGGCEEEEEEEESSSSSCEEEEEECTTSCEEEEECCTTCCH
T ss_pred CEEEEEEeCCCCCcccCCcccceEEEEEEEcCCCCCccCCCCceEEEEcCCCCCcccCCcEeECCCCcEEEEeCCCCCCC
Confidence 889997431 14544431 1 1 122211 114567799999999999986421100
Q ss_pred --cccccccccccCCceEEEEeCCCC--------------------eEEEeecCccccceEEEcCC-----CC-EEEEEe
Q 018705 157 --TDFYKDMAEGKPYGQLRKYDPKLK--------------------ETTVLHEGFYFANGIALSKN-----ED-FVVVCE 208 (351)
Q Consensus 157 --~~~~~~~~~~~~~g~l~~~d~~~~--------------------~~~~~~~~~~~~ngi~~~~d-----g~-~lyv~~ 208 (351)
.....+ .....|.|+|+|+++. +.++++.++.+|.|++++++ |+ ++|.+|
T Consensus 164 ~~~~~~q~--~~~~~GkIlRi~~dg~~~~~~y~iP~dNPf~~~~~~~~eI~a~G~RNp~gla~dp~tg~~~G~l~~~~~D 241 (463)
T 2wg3_C 164 DDMEEMDG--LSDFTGSVLRLDVDTDMCNVPYSIPRSNPHFNSTNQPPEVFAHGLHDPGRCAVDRHPTDININLTILCSD 241 (463)
T ss_dssp HHHHHCTT--CCSCTTEEEEEBCCCCCSSCSCBCCTTSTTTTCSSSCTTEEEECCSSCCBEEEESSCSSTTCSEEEEEEC
T ss_pred CccccccC--cCCCCeeEEEEECCCCcccccCcCCCCCCCcCCCCCcccEEEECCCCcceEEECCCCCCcccceEEEecc
Confidence 000000 1133688999999853 24577888999999999997 44 577788
Q ss_pred c
Q 018705 209 S 209 (351)
Q Consensus 209 ~ 209 (351)
.
T Consensus 242 ~ 242 (463)
T 2wg3_C 242 S 242 (463)
T ss_dssp C
T ss_pred c
Confidence 6
No 162
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=98.81 E-value=7.7e-06 Score=72.65 Aligned_cols=228 Identities=11% Similarity=0.134 Sum_probs=137.7
Q ss_pred cCCCceEEEeeCCCeEEEEEcCCEEEEEEcCCCeEEEE-eecCCccccceEEcCCCCEEEEeCCCCeEEEc---C--CC-
Q 018705 51 VNHPEDVSVVVSKGALYTATRDGWVKYFILHNETLVNW-KHIDSQSLLGLTTTKDGGVILCDNEKGLLKVT---E--EG- 123 (351)
Q Consensus 51 ~~~pe~i~~d~~~g~lyv~~~~g~I~~~d~~~g~~~~~-~~~~~~p~~gl~~d~~G~L~v~d~~~gl~~~~---~--~g- 123 (351)
-..-.++++ ++++.++++..+|.|..||..+++.... ........ .++++++++++++....+.+++. . .+
T Consensus 18 ~~~v~~~~~-~~~~~l~s~~~dg~v~vw~~~~~~~~~~~~~~~~~v~-~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~~ 95 (313)
T 3odt_A 18 DQDVRDVVA-VDDSKVASVSRDGTVRLWSKDDQWLGTVVYTGQGFLN-SVCYDSEKELLLFGGKDTMINGVPLFATSGED 95 (313)
T ss_dssp SSCEEEEEE-EETTEEEEEETTSEEEEEEESSSEEEEEEEECSSCEE-EEEEETTTTEEEEEETTSCEEEEETTCCTTSC
T ss_pred CCCcEEEEe-cCCCEEEEEEcCCcEEEEECCCCEEEEEeecCCccEE-EEEECCCCCEEEEecCCCeEEEEEeeecCCCC
Confidence 345568888 6888999999999999999877765433 33345556 89999999876655555555533 2 12
Q ss_pred -eEEecCCCCCcccEEEccCCcEEEEeCCCccCCcccccccccccCCceEEEEeCCCCeEEEeecCccccceEEEcC-CC
Q 018705 124 -VEAIVPDASFTNDVIAASDGTLYFTVASTKYTPTDFYKDMAEGKPYGQLRKYDPKLKETTVLHEGFYFANGIALSK-NE 201 (351)
Q Consensus 124 -~~~l~~~~~~~n~l~~d~dG~ly~t~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~~~~~~~~~~~~~~ngi~~~~-dg 201 (351)
...+......+.++.+ ++.+.++.+. +|.|..||.. .....+.........+++.+ ++
T Consensus 96 ~~~~~~~~~~~i~~~~~--~~~~l~~~~~-----------------d~~i~~~d~~-~~~~~~~~~~~~v~~~~~~~~~~ 155 (313)
T 3odt_A 96 PLYTLIGHQGNVCSLSF--QDGVVISGSW-----------------DKTAKVWKEG-SLVYNLQAHNASVWDAKVVSFSE 155 (313)
T ss_dssp C-CEECCCSSCEEEEEE--ETTEEEEEET-----------------TSEEEEEETT-EEEEEEECCSSCEEEEEEEETTT
T ss_pred cccchhhcccCEEEEEe--cCCEEEEEeC-----------------CCCEEEEcCC-cEEEecccCCCceeEEEEccCCC
Confidence 3333333355666666 4545554433 4678888832 23333333344556778877 78
Q ss_pred CEEEEEecce--eEEeecCCCCceeEEeccCCCCCCceEECCCCCEEEEEecCCchhhhhhhcChhHHHHHHhccchhhc
Q 018705 202 DFVVVCESWK--RYWLKGDRAGILDAFIENLPGGPDNINLAPDGSFWIGLIKMNQTGVRAIQKCREKWELLDAYPGLISL 279 (351)
Q Consensus 202 ~~lyv~~~~~--~~~i~~~~~~~~~~~~~~~~g~pd~i~~d~~G~lwva~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 279 (351)
+.++.+..++ ++|- . ......+..........+++.++|.+..+...
T Consensus 156 ~~l~~~~~d~~i~i~d--~-~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~d---------------------------- 204 (313)
T 3odt_A 156 NKFLTASADKTIKLWQ--N-DKVIKTFSGIHNDVVRHLAVVDDGHFISCSND---------------------------- 204 (313)
T ss_dssp TEEEEEETTSCEEEEE--T-TEEEEEECSSCSSCEEEEEEEETTEEEEEETT----------------------------
T ss_pred CEEEEEECCCCEEEEe--c-CceEEEEeccCcccEEEEEEcCCCeEEEccCC----------------------------
Confidence 8777776666 4552 1 11122222112333456778888885444322
Q ss_pred ccCCCCCCceEEEEEECCCCeEEEEEECCCCCcccceeEEEEE-CCEEEEEecCCCeEEEEeCCCCC
Q 018705 280 LLPMGSDAGARVVKVDGNDGKIIRDFNDPDATYISFVTSAAEF-DGNLYLASLQSNFIGILPLDGPE 345 (351)
Q Consensus 280 ~~~~~~~~~~~v~~~~~~~g~~~~~~~~~~g~~~~~~~~~~~~-~g~L~ig~~~~~~i~~~~~~~~~ 345 (351)
+.+..+|..+++.+..+..+.+ .++++... +++|+.++. .+.|..++++...
T Consensus 205 ---------g~i~i~d~~~~~~~~~~~~~~~----~i~~~~~~~~~~l~~~~~-dg~v~iwd~~~~~ 257 (313)
T 3odt_A 205 ---------GLIKLVDMHTGDVLRTYEGHES----FVYCIKLLPNGDIVSCGE-DRTVRIWSKENGS 257 (313)
T ss_dssp ---------SEEEEEETTTCCEEEEEECCSS----CEEEEEECTTSCEEEEET-TSEEEEECTTTCC
T ss_pred ---------CeEEEEECCchhhhhhhhcCCc----eEEEEEEecCCCEEEEec-CCEEEEEECCCCc
Confidence 3577778756787777765443 46666655 346666654 6778888876654
No 163
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=98.81 E-value=7.9e-06 Score=73.91 Aligned_cols=176 Identities=9% Similarity=0.110 Sum_probs=113.7
Q ss_pred CCceEEEeeCCCeEEEEEcCCEEEEEEcCCCeE-EEEeecCCccccceEEcCCCCEEEEeCCCCeEEEcC-CC--eEEec
Q 018705 53 HPEDVSVVVSKGALYTATRDGWVKYFILHNETL-VNWKHIDSQSLLGLTTTKDGGVILCDNEKGLLKVTE-EG--VEAIV 128 (351)
Q Consensus 53 ~pe~i~~d~~~g~lyv~~~~g~I~~~d~~~g~~-~~~~~~~~~p~~gl~~d~~G~L~v~d~~~gl~~~~~-~g--~~~l~ 128 (351)
.-.++++.+++..+.++..|+.|..||..+++. ..+........ .+++++++.++++....+.++++. .+ ...+.
T Consensus 67 ~v~~~~~s~dg~~l~s~s~D~~v~~wd~~~~~~~~~~~~h~~~v~-~~~~~~~~~~l~s~s~D~~i~vwd~~~~~~~~~~ 145 (319)
T 3frx_A 67 IVQDCTLTADGAYALSASWDKTLRLWDVATGETYQRFVGHKSDVM-SVDIDKKASMIISGSRDKTIKVWTIKGQCLATLL 145 (319)
T ss_dssp CEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEE-EEEECTTSCEEEEEETTSCEEEEETTSCEEEEEC
T ss_pred cEEEEEECCCCCEEEEEeCCCEEEEEECCCCCeeEEEccCCCcEE-EEEEcCCCCEEEEEeCCCeEEEEECCCCeEEEEe
Confidence 445788997777888999999999999988865 34444445566 899999998877766667777763 44 44444
Q ss_pred CCCCCcccEEEccC------CcEEEEeCCCccCCcccccccccccCCceEEEEeCCCCeEEEee-cCccccceEEEcCCC
Q 018705 129 PDASFTNDVIAASD------GTLYFTVASTKYTPTDFYKDMAEGKPYGQLRKYDPKLKETTVLH-EGFYFANGIALSKNE 201 (351)
Q Consensus 129 ~~~~~~n~l~~d~d------G~ly~t~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~~~~~~~~-~~~~~~ngi~~~~dg 201 (351)
.....+..+.+.++ +...++.+. ++.|..||..+++..... ......+.++++|++
T Consensus 146 ~h~~~v~~~~~~~~~~~~~~~~~l~s~~~-----------------d~~i~~wd~~~~~~~~~~~~h~~~v~~~~~sp~g 208 (319)
T 3frx_A 146 GHNDWVSQVRVVPNEKADDDSVTIISAGN-----------------DKMVKAWNLNQFQIEADFIGHNSNINTLTASPDG 208 (319)
T ss_dssp CCSSCEEEEEECCC------CCEEEEEET-----------------TSCEEEEETTTTEEEEEECCCCSCEEEEEECTTS
T ss_pred ccCCcEEEEEEccCCCCCCCccEEEEEeC-----------------CCEEEEEECCcchhheeecCCCCcEEEEEEcCCC
Confidence 33355667777664 334444433 567889998776654433 233456789999999
Q ss_pred CEEEEEecce--eEEeecCCCCce-eEEeccCCCCCCceEECCCCCEEEEEe
Q 018705 202 DFVVVCESWK--RYWLKGDRAGIL-DAFIENLPGGPDNINLAPDGSFWIGLI 250 (351)
Q Consensus 202 ~~lyv~~~~~--~~~i~~~~~~~~-~~~~~~~~g~pd~i~~d~~G~lwva~~ 250 (351)
+.|..+..++ ++|-. ..++. ..+. .+.....++++++|.+.++..
T Consensus 209 ~~l~s~~~dg~i~iwd~--~~~~~~~~~~--~~~~v~~~~~sp~~~~la~~~ 256 (319)
T 3frx_A 209 TLIASAGKDGEIMLWNL--AAKKAMYTLS--AQDEVFSLAFSPNRYWLAAAT 256 (319)
T ss_dssp SEEEEEETTCEEEEEET--TTTEEEEEEE--CCSCEEEEEECSSSSEEEEEE
T ss_pred CEEEEEeCCCeEEEEEC--CCCcEEEEec--CCCcEEEEEEcCCCCEEEEEc
Confidence 9776666666 55522 22222 1221 122235678999997665543
No 164
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=98.79 E-value=1.3e-05 Score=74.70 Aligned_cols=178 Identities=12% Similarity=0.078 Sum_probs=110.9
Q ss_pred CCceEEEeeCCCeEEEEEcCCEEEEEEcCCCeEEEEe-ecC------------------CccccceEEcCCCCEEEEeCC
Q 018705 53 HPEDVSVVVSKGALYTATRDGWVKYFILHNETLVNWK-HID------------------SQSLLGLTTTKDGGVILCDNE 113 (351)
Q Consensus 53 ~pe~i~~d~~~g~lyv~~~~g~I~~~d~~~g~~~~~~-~~~------------------~~p~~gl~~d~~G~L~v~d~~ 113 (351)
.-.+++++|++..+.++. ++.+..|+..+|+..... ... .... .+++.++|+++++...
T Consensus 66 ~V~~v~fspdg~~la~g~-~~~v~i~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~v~-~v~~s~dg~~l~s~~~ 143 (393)
T 1erj_A 66 VVCCVKFSNDGEYLATGC-NKTTQVYRVSDGSLVARLSDDSAANKDPENLNTSSSPSSDLYIR-SVCFSPDGKFLATGAE 143 (393)
T ss_dssp CCCEEEECTTSSEEEEEC-BSCEEEEETTTCCEEEEECC-----------------CCCCBEE-EEEECTTSSEEEEEET
T ss_pred EEEEEEECCCCCEEEEEc-CCcEEEEEecCCCEEEEecCccccccccccccccccCCCceeEE-EEEECCCCCEEEEEcC
Confidence 346899997666666654 677888888777653221 100 0134 7899999987776656
Q ss_pred CCeEEEc--CCC--eEEecCCCCCcccEEEccCCcEEEEeCCCccCCcccccccccccCCceEEEEeCCCCeEEEeecCc
Q 018705 114 KGLLKVT--EEG--VEAIVPDASFTNDVIAASDGTLYFTVASTKYTPTDFYKDMAEGKPYGQLRKYDPKLKETTVLHEGF 189 (351)
Q Consensus 114 ~gl~~~~--~~g--~~~l~~~~~~~n~l~~d~dG~ly~t~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~~~~~~~~~~~ 189 (351)
.+.+++. .++ ...+......++++++.++|...++.+. ++.+..||..+++........
T Consensus 144 d~~i~iwd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~-----------------d~~v~iwd~~~~~~~~~~~~~ 206 (393)
T 1erj_A 144 DRLIRIWDIENRKIVMILQGHEQDIYSLDYFPSGDKLVSGSG-----------------DRTVRIWDLRTGQCSLTLSIE 206 (393)
T ss_dssp TSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEET-----------------TSEEEEEETTTTEEEEEEECS
T ss_pred CCeEEEEECCCCcEEEEEccCCCCEEEEEEcCCCCEEEEecC-----------------CCcEEEEECCCCeeEEEEEcC
Confidence 6666665 245 4445444467889999999987776654 568999998888765444333
Q ss_pred cccceEEEcC-CCCEEEEEecce--eEEeecCCCCce-eEEec------cCCCCCCceEECCCCCEEEEEec
Q 018705 190 YFANGIALSK-NEDFVVVCESWK--RYWLKGDRAGIL-DAFIE------NLPGGPDNINLAPDGSFWIGLIK 251 (351)
Q Consensus 190 ~~~ngi~~~~-dg~~lyv~~~~~--~~~i~~~~~~~~-~~~~~------~~~g~pd~i~~d~~G~lwva~~~ 251 (351)
.....++++| +++.+..+..++ ++|-. ..+.. ..+.. ........++++++|.+.++...
T Consensus 207 ~~v~~~~~~~~~~~~l~~~s~d~~v~iwd~--~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s~ 276 (393)
T 1erj_A 207 DGVTTVAVSPGDGKYIAAGSLDRAVRVWDS--ETGFLVERLDSENESGTGHKDSVYSVVFTRDGQSVVSGSL 276 (393)
T ss_dssp SCEEEEEECSTTCCEEEEEETTSCEEEEET--TTCCEEEEEC------CCCSSCEEEEEECTTSSEEEEEET
T ss_pred CCcEEEEEECCCCCEEEEEcCCCcEEEEEC--CCCcEEEeecccccCCCCCCCCEEEEEECCCCCEEEEEeC
Confidence 4566789998 888666666666 55521 12221 11110 11112345788999987766543
No 165
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=98.79 E-value=1e-06 Score=89.03 Aligned_cols=192 Identities=13% Similarity=0.083 Sum_probs=111.4
Q ss_pred CceEEEeeCCCeEEEEEcCCEEEEEEcCCC---eEEEEeecCCccccceEEcCCCCEEEEeCCCCeEEEcC-CC-eEEec
Q 018705 54 PEDVSVVVSKGALYTATRDGWVKYFILHNE---TLVNWKHIDSQSLLGLTTTKDGGVILCDNEKGLLKVTE-EG-VEAIV 128 (351)
Q Consensus 54 pe~i~~d~~~g~lyv~~~~g~I~~~d~~~g---~~~~~~~~~~~p~~gl~~d~~G~L~v~d~~~gl~~~~~-~g-~~~l~ 128 (351)
..+++++|++..++++.. +.|+.+|..++ +.+.+......+. .+++++||+.++......++.++. ++ ...+.
T Consensus 111 v~~~~~SpDg~~l~~~~~-~~i~~~d~~~~~~~~~~~l~~~~~~~~-~~~~SPDG~~la~~~~~~i~~~d~~~g~~~~~~ 188 (741)
T 2ecf_A 111 IVDYQWSPDAQRLLFPLG-GELYLYDLKQEGKAAVRQLTHGEGFAT-DAKLSPKGGFVSFIRGRNLWVIDLASGRQMQLT 188 (741)
T ss_dssp SCCCEECTTSSEEEEEET-TEEEEEESSSCSTTSCCBCCCSSSCEE-EEEECTTSSEEEEEETTEEEEEETTTTEEEECC
T ss_pred cceeEECCCCCEEEEEeC-CcEEEEECCCCCcceEEEcccCCcccc-cccCCCCCCEEEEEeCCcEEEEecCCCCEEEec
Confidence 468899987777777665 88999999777 6655544445566 899999997544433446777774 55 44443
Q ss_pred CCCC-----------------CcccEEEccCCc-EEEEeCC-CccCC-------------ccccccccccc--CCceEEE
Q 018705 129 PDAS-----------------FTNDVIAASDGT-LYFTVAS-TKYTP-------------TDFYKDMAEGK--PYGQLRK 174 (351)
Q Consensus 129 ~~~~-----------------~~n~l~~d~dG~-ly~t~~~-~~~~~-------------~~~~~~~~~~~--~~g~l~~ 174 (351)
.... .+.+++++|||+ |+++... ..... ....+. ..+. ....|+.
T Consensus 189 ~~~~~~~~~g~~~~v~~~~~~~~~~~~~SpDg~~l~~~~~d~~~~~~~~~~~~~p~~~~~~~~~~~-~~g~~~~~~~l~~ 267 (741)
T 2ecf_A 189 ADGSTTIGNGIAEFVADEEMDRHTGYWWAPDDSAIAYARIDESPVPVQKRYEVYADRTDVIEQRYP-AAGDANVQVKLGV 267 (741)
T ss_dssp CCCCSSEEESCCCHHHHHHSCCCCSEEECTTSSCEEEEEEECTTSCEEEEEEECSSCEEEEEEECC-BTTSCCCEEEEEE
T ss_pred cCCccceeccccceeeeeccccccceEECCCCCEEEEEEEcCCCCceEecCCCCCCcccceEeecC-CCCCCCCeeEEEE
Confidence 2211 257899999995 6655321 00000 000000 0011 1126889
Q ss_pred EeCCC-CeEEEeec---CccccceEEEcCCCCEEEEEecc----e-eEEeecCCCCceeEEec-cCCC---CCCceEECC
Q 018705 175 YDPKL-KETTVLHE---GFYFANGIALSKNEDFVVVCESW----K-RYWLKGDRAGILDAFIE-NLPG---GPDNINLAP 241 (351)
Q Consensus 175 ~d~~~-~~~~~~~~---~~~~~ngi~~~~dg~~lyv~~~~----~-~~~i~~~~~~~~~~~~~-~~~g---~pd~i~~d~ 241 (351)
+|.++ ++.+.+.. .......+++ |||+.|+++... . .+++-+...++...... ...+ ....+++++
T Consensus 268 ~d~~~~~~~~~~~~~~~~~~~~~~~~~-pDg~~l~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~sp 346 (741)
T 2ecf_A 268 ISPAEQAQTQWIDLGKEQDIYLARVNW-RDPQHLSFQRQSRDQKKLDLVEVTLASNQQRVLAHETSPTWVPLHNSLRFLD 346 (741)
T ss_dssp ECSSTTCCCEEECCCSCSSEEEEEEEE-EETTEEEEEEEETTSSEEEEEEEETTTCCEEEEEEEECSSCCCCCSCCEECT
T ss_pred EECCCCCceEEecCCCCcceEEEEEEe-CCCCEEEEEEecccCCeEEEEEEECCCCceEEEEEcCCCCcCCcCCceEECC
Confidence 99887 77655432 2234567899 999988876542 1 44444433344332222 1111 124688999
Q ss_pred CCCEEEEE
Q 018705 242 DGSFWIGL 249 (351)
Q Consensus 242 ~G~lwva~ 249 (351)
+|+++++.
T Consensus 347 dg~~~~~~ 354 (741)
T 2ecf_A 347 DGSILWSS 354 (741)
T ss_dssp TSCEEEEE
T ss_pred CCeEEEEe
Confidence 99855543
No 166
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=98.78 E-value=2.4e-06 Score=86.96 Aligned_cols=179 Identities=8% Similarity=0.021 Sum_probs=113.6
Q ss_pred CCceEEEeeCCCeEEEEEcCCEEEEEEcCCCeEE-EEeecCCccccceEEcCCCCEEEEeCCCCeEEEc--CCC---eEE
Q 018705 53 HPEDVSVVVSKGALYTATRDGWVKYFILHNETLV-NWKHIDSQSLLGLTTTKDGGVILCDNEKGLLKVT--EEG---VEA 126 (351)
Q Consensus 53 ~pe~i~~d~~~g~lyv~~~~g~I~~~d~~~g~~~-~~~~~~~~p~~gl~~d~~G~L~v~d~~~gl~~~~--~~g---~~~ 126 (351)
...+++|+|++..+.++..+|.|..|+..+++.. .+........ .+++.++|..+++....+.+++. .++ ...
T Consensus 57 ~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~v~-~~~~s~~~~~l~~~~~dg~i~vw~~~~~~~~~~~ 135 (814)
T 3mkq_A 57 PVRAGKFIARKNWIIVGSDDFRIRVFNYNTGEKVVDFEAHPDYIR-SIAVHPTKPYVLSGSDDLTVKLWNWENNWALEQT 135 (814)
T ss_dssp CEEEEEEEGGGTEEEEEETTSEEEEEETTTCCEEEEEECCSSCEE-EEEECSSSSEEEEEETTSEEEEEEGGGTSEEEEE
T ss_pred cEEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEecCCCCEE-EEEEeCCCCEEEEEcCCCEEEEEECCCCceEEEE
Confidence 4568999988888999999999999998777653 3433445566 89999999765554455655555 232 344
Q ss_pred ecCCCCCcccEEEcc-CCcEEEEeCCCccCCcccccccccccCCceEEEEeCCCCeEEE-eecC-ccccceEEEcC--CC
Q 018705 127 IVPDASFTNDVIAAS-DGTLYFTVASTKYTPTDFYKDMAEGKPYGQLRKYDPKLKETTV-LHEG-FYFANGIALSK--NE 201 (351)
Q Consensus 127 l~~~~~~~n~l~~d~-dG~ly~t~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~~~~~~-~~~~-~~~~ngi~~~~--dg 201 (351)
+......+.+++++| +|..+++.+. +|.|..||..+++... +... ....+.+++++ ++
T Consensus 136 ~~~~~~~v~~~~~~p~~~~~l~~~~~-----------------dg~v~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 198 (814)
T 3mkq_A 136 FEGHEHFVMCVAFNPKDPSTFASGCL-----------------DRTVKVWSLGQSTPNFTLTTGQERGVNYVDYYPLPDK 198 (814)
T ss_dssp EECCSSCEEEEEEETTEEEEEEEEET-----------------TSEEEEEETTCSSCSEEEECCCTTCCCEEEECCSTTC
T ss_pred EcCCCCcEEEEEEEcCCCCEEEEEeC-----------------CCeEEEEECCCCcceeEEecCCCCCEEEEEEEECCCC
Confidence 443336788999999 7766666543 4678899876554322 2222 24567899998 88
Q ss_pred CEEEEEecceeEEeecCCCCce-eEEeccCCCCCCceEECCCCCEEEEEe
Q 018705 202 DFVVVCESWKRYWLKGDRAGIL-DAFIENLPGGPDNINLAPDGSFWIGLI 250 (351)
Q Consensus 202 ~~lyv~~~~~~~~i~~~~~~~~-~~~~~~~~g~pd~i~~d~~G~lwva~~ 250 (351)
..++++..++.+.+-+...++. ..+. ...+....++++++|.+.++..
T Consensus 199 ~~l~~~~~dg~i~~~d~~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~ 247 (814)
T 3mkq_A 199 PYMITASDDLTIKIWDYQTKSCVATLE-GHMSNVSFAVFHPTLPIIISGS 247 (814)
T ss_dssp CEEEEECTTSEEEEEETTTTEEEEEEE-CCSSCEEEEEECSSSSEEEEEE
T ss_pred CEEEEEeCCCEEEEEECCCCcEEEEEc-CCCCCEEEEEEcCCCCEEEEEe
Confidence 8777776666333222222222 2222 2222335578899998666544
No 167
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=98.78 E-value=2.6e-05 Score=71.70 Aligned_cols=182 Identities=13% Similarity=0.087 Sum_probs=116.0
Q ss_pred CCcCCCceEEEeeCCCeEEEEEcCCEEEEEEcCCCeEE-EEeecCCccccceEEcCCCCEEEEeCCCCeEEEcC---C--
Q 018705 49 GCVNHPEDVSVVVSKGALYTATRDGWVKYFILHNETLV-NWKHIDSQSLLGLTTTKDGGVILCDNEKGLLKVTE---E-- 122 (351)
Q Consensus 49 ~~~~~pe~i~~d~~~g~lyv~~~~g~I~~~d~~~g~~~-~~~~~~~~p~~gl~~d~~G~L~v~d~~~gl~~~~~---~-- 122 (351)
+.-..-.++++.+++..+.++..||.|..||..+++.. .+........ .+++.++|.++++....+.+++.. +
T Consensus 62 gH~~~V~~~~~s~d~~~l~s~s~Dg~v~vWd~~~~~~~~~~~~~~~~v~-~~~~sp~g~~lasg~~d~~i~v~~~~~~~~ 140 (354)
T 2pbi_B 62 GHGNKVLCMDWCKDKRRIVSSSQDGKVIVWDSFTTNKEHAVTMPCTWVM-ACAYAPSGCAIACGGLDNKCSVYPLTFDKN 140 (354)
T ss_dssp CCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECSSSCCC-EEEECTTSSEEEEESTTSEEEEEECCCCTT
T ss_pred CCCCeEEEEEECCCCCEEEEEeCCCeEEEEECCCCCcceEEecCCCCEE-EEEECCCCCEEEEeeCCCCEEEEEEecccc
Confidence 43344568999987788999999999999998776553 3333344556 899999999888777766666541 1
Q ss_pred -C----eEEecCCCCCcccEEEccCCcEEEEeCCCccCCcccccccccccCCceEEEEeCCCCeEEEee-cCccccceEE
Q 018705 123 -G----VEAIVPDASFTNDVIAASDGTLYFTVASTKYTPTDFYKDMAEGKPYGQLRKYDPKLKETTVLH-EGFYFANGIA 196 (351)
Q Consensus 123 -g----~~~l~~~~~~~n~l~~d~dG~ly~t~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~~~~~~~~-~~~~~~ngi~ 196 (351)
+ ...+......+..+++.+++...++.+. ++.|..||..+++..... ........++
T Consensus 141 ~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~t~s~-----------------D~~v~lwd~~~~~~~~~~~~h~~~v~~~~ 203 (354)
T 2pbi_B 141 ENMAAKKKSVAMHTNYLSACSFTNSDMQILTASG-----------------DGTCALWDVESGQLLQSFHGHGADVLCLD 203 (354)
T ss_dssp CCSGGGCEEEEECSSCEEEEEECSSSSEEEEEET-----------------TSEEEEEETTTCCEEEEEECCSSCEEEEE
T ss_pred ccccccceeeeccCCcEEEEEEeCCCCEEEEEeC-----------------CCcEEEEeCCCCeEEEEEcCCCCCeEEEE
Confidence 1 2222222256788889999876666554 568999998877654332 2233445677
Q ss_pred EcC--CCCEEEEEecce--eEEeecCCCCce-eEEeccCCCCCCceEECCCCCEEEEEec
Q 018705 197 LSK--NEDFVVVCESWK--RYWLKGDRAGIL-DAFIENLPGGPDNINLAPDGSFWIGLIK 251 (351)
Q Consensus 197 ~~~--dg~~lyv~~~~~--~~~i~~~~~~~~-~~~~~~~~g~pd~i~~d~~G~lwva~~~ 251 (351)
+++ +++.++.+..++ ++| +...++. ..+. ........+++.++|++.++...
T Consensus 204 ~~~~~~g~~l~sgs~Dg~v~~w--d~~~~~~~~~~~-~h~~~v~~v~~~p~~~~l~s~s~ 260 (354)
T 2pbi_B 204 LAPSETGNTFVSGGCDKKAMVW--DMRSGQCVQAFE-THESDVNSVRYYPSGDAFASGSD 260 (354)
T ss_dssp ECCCSSCCEEEEEETTSCEEEE--ETTTCCEEEEEC-CCSSCEEEEEECTTSSEEEEEET
T ss_pred EEeCCCCCEEEEEeCCCeEEEE--ECCCCcEEEEec-CCCCCeEEEEEeCCCCEEEEEeC
Confidence 766 566677776666 555 2222332 2222 22223456788999987776543
No 168
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=98.78 E-value=1.7e-05 Score=73.90 Aligned_cols=225 Identities=11% Similarity=0.073 Sum_probs=132.1
Q ss_pred eEEEeeCCCeEEEEEcCCEEEEEEcCCCeEEEEeec--CCccccceEEcCCCCEEEEeCCCCeEEEc--CCC--eEEecC
Q 018705 56 DVSVVVSKGALYTATRDGWVKYFILHNETLVNWKHI--DSQSLLGLTTTKDGGVILCDNEKGLLKVT--EEG--VEAIVP 129 (351)
Q Consensus 56 ~i~~d~~~g~lyv~~~~g~I~~~d~~~g~~~~~~~~--~~~p~~gl~~d~~G~L~v~d~~~gl~~~~--~~g--~~~l~~ 129 (351)
++.++ ++.++++..+|.|..|+..+++....... ..... .+++.++|+++++....|.+++. .++ ...+..
T Consensus 98 ~~~~s--~~~l~~~~~d~~v~lw~~~~~~~~~~~~~~~~~~v~-~v~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~ 174 (401)
T 4aez_A 98 LLDWS--NLNVVAVALERNVYVWNADSGSVSALAETDESTYVA-SVKWSHDGSFLSVGLGNGLVDIYDVESQTKLRTMAG 174 (401)
T ss_dssp CEEEC--TTSEEEEEETTEEEEEETTTCCEEEEEECCTTCCEE-EEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECC
T ss_pred EEeec--CCCEEEEECCCeEEEeeCCCCcEeEeeecCCCCCEE-EEEECCCCCEEEEECCCCeEEEEECcCCeEEEEecC
Confidence 45554 56788888999999999988876544332 34456 89999999766555445555555 344 555544
Q ss_pred CCCCcccEEEccCCcEEEEeCCCccCCcccccccccccCCceEEEEeCCC-Ce-EEEeecCccccceEEEcCCCCEEEEE
Q 018705 130 DASFTNDVIAASDGTLYFTVASTKYTPTDFYKDMAEGKPYGQLRKYDPKL-KE-TTVLHEGFYFANGIALSKNEDFVVVC 207 (351)
Q Consensus 130 ~~~~~n~l~~d~dG~ly~t~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~-~~-~~~~~~~~~~~ngi~~~~dg~~lyv~ 207 (351)
....+.++++ ++.+.++.+. +|.|..||... +. ...+........+++++++++.++.+
T Consensus 175 ~~~~v~~~~~--~~~~l~~~~~-----------------dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~ 235 (401)
T 4aez_A 175 HQARVGCLSW--NRHVLSSGSR-----------------SGAIHHHDVRIANHQIGTLQGHSSEVCGLAWRSDGLQLASG 235 (401)
T ss_dssp CSSCEEEEEE--ETTEEEEEET-----------------TSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSSEEEEE
T ss_pred CCCceEEEEE--CCCEEEEEcC-----------------CCCEEEEecccCcceeeEEcCCCCCeeEEEEcCCCCEEEEE
Confidence 3356667776 4445555433 56888898763 22 33333444567789999999977777
Q ss_pred ecce--eEEeecCCCCceeEEeccCCCCCCceEECCCCC-EEEEEecCCchhhhhhhcChhHHHHHHhccchhhcccCCC
Q 018705 208 ESWK--RYWLKGDRAGILDAFIENLPGGPDNINLAPDGS-FWIGLIKMNQTGVRAIQKCREKWELLDAYPGLISLLLPMG 284 (351)
Q Consensus 208 ~~~~--~~~i~~~~~~~~~~~~~~~~g~pd~i~~d~~G~-lwva~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 284 (351)
..++ ++| +...+..........+....+++.++|. ++++...
T Consensus 236 ~~d~~v~iw--d~~~~~~~~~~~~~~~~v~~~~~~p~~~~ll~~~~g--------------------------------- 280 (401)
T 4aez_A 236 GNDNVVQIW--DARSSIPKFTKTNHNAAVKAVAWCPWQSNLLATGGG--------------------------------- 280 (401)
T ss_dssp ETTSCEEEE--ETTCSSEEEEECCCSSCCCEEEECTTSTTEEEEECC---------------------------------
T ss_pred eCCCeEEEc--cCCCCCccEEecCCcceEEEEEECCCCCCEEEEecC---------------------------------
Confidence 7666 444 2222222211212333456788998775 5554321
Q ss_pred CCCceEEEEEECCCCeEEEEEECCCCCcccceeEEEEE-CC-EEEEE-ecCCCeEEEEeCCC
Q 018705 285 SDAGARVVKVDGNDGKIIRDFNDPDATYISFVTSAAEF-DG-NLYLA-SLQSNFIGILPLDG 343 (351)
Q Consensus 285 ~~~~~~v~~~~~~~g~~~~~~~~~~g~~~~~~~~~~~~-~g-~L~ig-~~~~~~i~~~~~~~ 343 (351)
...+.+..+|..+++.+..+... ..++++... ++ .|+.. ....+.|..++++.
T Consensus 281 -s~d~~i~i~d~~~~~~~~~~~~~-----~~v~~~~~s~~~~~l~~~~g~~dg~i~v~~~~~ 336 (401)
T 4aez_A 281 -TMDKQIHFWNAATGARVNTVDAG-----SQVTSLIWSPHSKEIMSTHGFPDNNLSIWSYSS 336 (401)
T ss_dssp -TTTCEEEEEETTTCCEEEEEECS-----SCEEEEEECSSSSEEEEEECTTTCEEEEEEEET
T ss_pred -CCCCEEEEEECCCCCEEEEEeCC-----CcEEEEEECCCCCeEEEEeecCCCcEEEEecCC
Confidence 12345677776566666666432 135555543 23 34442 22356676666554
No 169
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=98.75 E-value=6.8e-06 Score=80.45 Aligned_cols=238 Identities=12% Similarity=0.094 Sum_probs=141.6
Q ss_pred CCCceEEEeeCCCeEEEEEcCCEEEEEEcCCC----e-EEEEeecCCc-cccceEEcC--CCCEEEEeCCCCeEEEcC-C
Q 018705 52 NHPEDVSVVVSKGALYTATRDGWVKYFILHNE----T-LVNWKHIDSQ-SLLGLTTTK--DGGVILCDNEKGLLKVTE-E 122 (351)
Q Consensus 52 ~~pe~i~~d~~~g~lyv~~~~g~I~~~d~~~g----~-~~~~~~~~~~-p~~gl~~d~--~G~L~v~d~~~gl~~~~~-~ 122 (351)
..+.+++++|++..+.++. ++.|..|+..++ + ...+...... .. .+++++ +|+++++....+.++++. .
T Consensus 19 ~~v~~~~~spdg~~l~~~~-~~~v~v~~~~~~~~~~~~~~~~~~h~~~~v~-~~~~sp~~~~~~l~s~~~dg~v~vw~~~ 96 (615)
T 1pgu_A 19 NFTTHLSYDPTTNAIAYPC-GKSAFVRCLDDGDSKVPPVVQFTGHGSSVVT-TVKFSPIKGSQYLCSGDESGKVIVWGWT 96 (615)
T ss_dssp TCCCCCEEETTTTEEEEEE-TTEEEEEECCSSCCSSCSEEEECTTTTSCEE-EEEECSSTTCCEEEEEETTSEEEEEEEE
T ss_pred CceeEEEECCCCCEEEEec-CCeEEEEECCCCCCccccceEEecCCCceEE-EEEECcCCCCCEEEEecCCCEEEEEeCC
Confidence 4567899997777777766 788999998777 3 3444444455 66 899999 998766655566666552 1
Q ss_pred ---------C--eEEecCCCCCcccEEEccCCcEEEEeCCCccCCcccccccccccCCceEEEEeCCCCeEEEeecCccc
Q 018705 123 ---------G--VEAIVPDASFTNDVIAASDGTLYFTVASTKYTPTDFYKDMAEGKPYGQLRKYDPKLKETTVLHEGFYF 191 (351)
Q Consensus 123 ---------g--~~~l~~~~~~~n~l~~d~dG~ly~t~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~~~~~~~~~~~~~ 191 (351)
. ...+......+.+++++++|...++....+ ...+.|+.||. ......+......
T Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~-------------~~~~~v~~~d~-~~~~~~~~~~~~~ 162 (615)
T 1pgu_A 97 FDKESNSVEVNVKSEFQVLAGPISDISWDFEGRRLCVVGEGR-------------DNFGVFISWDS-GNSLGEVSGHSQR 162 (615)
T ss_dssp EEGGGTEEEEEEEEEEECCSSCEEEEEECTTSSEEEEEECCS-------------SCSEEEEETTT-CCEEEECCSCSSC
T ss_pred CCcccccccccccchhhcccccEEEEEEeCCCCEEEEeccCC-------------CCccEEEEEEC-CCcceeeecCCcc
Confidence 1 233332336788999999997665544311 11357888883 2344444444456
Q ss_pred cceEEEcCCCC-EEEEEecce--eEEeecCCCCceeEEeccCCC---CCCceEECCC-CCEEEEEecCCchhhhhhhcCh
Q 018705 192 ANGIALSKNED-FVVVCESWK--RYWLKGDRAGILDAFIENLPG---GPDNINLAPD-GSFWIGLIKMNQTGVRAIQKCR 264 (351)
Q Consensus 192 ~ngi~~~~dg~-~lyv~~~~~--~~~i~~~~~~~~~~~~~~~~g---~pd~i~~d~~-G~lwva~~~~~~~~~~~~~~~~ 264 (351)
...++++|+++ .++.+..++ ++| +...++.........+ ....++++++ |++.++...
T Consensus 163 v~~~~~~~~~~~~l~~~~~d~~v~vw--d~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~------------- 227 (615)
T 1pgu_A 163 INACHLKQSRPMRSMTVGDDGSVVFY--QGPPFKFSASDRTHHKQGSFVRDVEFSPDSGEFVITVGS------------- 227 (615)
T ss_dssp EEEEEECSSSSCEEEEEETTTEEEEE--ETTTBEEEEEECSSSCTTCCEEEEEECSTTCCEEEEEET-------------
T ss_pred EEEEEECCCCCcEEEEEeCCCcEEEE--eCCCcceeeeecccCCCCceEEEEEECCCCCCEEEEEeC-------------
Confidence 77899999997 565565555 444 2222222111112222 2345788998 886665432
Q ss_pred hHHHHHHhccchhhcccCCCCCCceEEEEEECCCCeEEEEEECCCCCcccceeEEEEECC-EEEEEecCCCeEEEEeCCC
Q 018705 265 EKWELLDAYPGLISLLLPMGSDAGARVVKVDGNDGKIIRDFNDPDATYISFVTSAAEFDG-NLYLASLQSNFIGILPLDG 343 (351)
Q Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~g~~~~~~~~~~g~~~~~~~~~~~~~g-~L~ig~~~~~~i~~~~~~~ 343 (351)
.+.|..+|..+++.+..+..+.......+.++...++ .|+.++ ..+.|..++++.
T Consensus 228 -----------------------dg~i~vwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~~~~-~d~~i~~wd~~~ 283 (615)
T 1pgu_A 228 -----------------------DRKISCFDGKSGEFLKYIEDDQEPVQGGIFALSWLDSQKFATVG-ADATIRVWDVTT 283 (615)
T ss_dssp -----------------------TCCEEEEETTTCCEEEECCBTTBCCCSCEEEEEESSSSEEEEEE-TTSEEEEEETTT
T ss_pred -----------------------CCeEEEEECCCCCEeEEecccccccCCceEEEEEcCCCEEEEEc-CCCcEEEEECCC
Confidence 1347777865788777772100011224566655344 444444 467788888765
Q ss_pred C
Q 018705 344 P 344 (351)
Q Consensus 344 ~ 344 (351)
.
T Consensus 284 ~ 284 (615)
T 1pgu_A 284 S 284 (615)
T ss_dssp T
T ss_pred C
Confidence 3
No 170
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=98.75 E-value=1.4e-06 Score=80.48 Aligned_cols=231 Identities=14% Similarity=0.124 Sum_probs=131.0
Q ss_pred CceEEEeeCCCeEEEEEcCCEEEEEEcCCCeEEE---Ee--ecCCccccceEEcCCCCEEEEeCCCCeEEEc--CCC--e
Q 018705 54 PEDVSVVVSKGALYTATRDGWVKYFILHNETLVN---WK--HIDSQSLLGLTTTKDGGVILCDNEKGLLKVT--EEG--V 124 (351)
Q Consensus 54 pe~i~~d~~~g~lyv~~~~g~I~~~d~~~g~~~~---~~--~~~~~p~~gl~~d~~G~L~v~d~~~gl~~~~--~~g--~ 124 (351)
-.+++|.| ++.+.++..+|.|..||..+++... +. ....... .+++.++|+.+++....+.+++. .++ .
T Consensus 97 V~~~~~s~-d~~~l~~s~dg~v~lWd~~~~~~~~~~~~~~~~h~~~V~-~v~~spdg~~l~sgs~dg~v~iwd~~~~~~~ 174 (357)
T 4g56_B 97 VTDVAWVS-EKGILVASDSGAVELWEILEKESLLVNKFAKYEHDDIVK-TLSVFSDGTQAVSGGKDFSVKVWDLSQKAVL 174 (357)
T ss_dssp EEEEEEET-TTEEEEEETTSCEEEC--------CCCCEEECCCSSCEE-EEEECSSSSEEEEEETTSCEEEEETTTTEEE
T ss_pred EEEEEEcC-CCCEEEEECCCEEEEeeccccceeEEEeeccCCCCCCEE-EEEECCCCCEEEEEeCCCeEEEEECCCCcEE
Confidence 45789994 6788888999999999876664321 11 1123455 89999999877765556666665 355 4
Q ss_pred EEecCCCCCcccEEEccCC-cEEEEeCCCccCCcccccccccccCCceEEEEeCCCCeEEEeec---CccccceEEEcCC
Q 018705 125 EAIVPDASFTNDVIAASDG-TLYFTVASTKYTPTDFYKDMAEGKPYGQLRKYDPKLKETTVLHE---GFYFANGIALSKN 200 (351)
Q Consensus 125 ~~l~~~~~~~n~l~~d~dG-~ly~t~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~~~~~~~~~---~~~~~ngi~~~~d 200 (351)
..+......++++++.+++ .++++... +|.|..||..+++...... ....+..++++|+
T Consensus 175 ~~~~~h~~~v~~v~~s~~~~~~~~s~~~-----------------dg~v~~wd~~~~~~~~~~~~~~~~~~v~~v~~sp~ 237 (357)
T 4g56_B 175 KSYNAHSSEVNCVAACPGKDTIFLSCGE-----------------DGRILLWDTRKPKPATRIDFCASDTIPTSVTWHPE 237 (357)
T ss_dssp EEECCCSSCEEEEEECTTCSSCEEEEET-----------------TSCEEECCTTSSSCBCBCCCTTCCSCEEEEEECTT
T ss_pred EEEcCCCCCEEEEEEccCCCceeeeecc-----------------CCceEEEECCCCceeeeeeeccccccccchhhhhc
Confidence 4454444678899999887 46665543 4678888877665332221 1234678999998
Q ss_pred CC-EEEEEecce--eEEeecCCCCc-eeEEeccCCCCCCceEECCCCCEEEEEecCCchhhhhhhcChhHHHHHHhccch
Q 018705 201 ED-FVVVCESWK--RYWLKGDRAGI-LDAFIENLPGGPDNINLAPDGSFWIGLIKMNQTGVRAIQKCREKWELLDAYPGL 276 (351)
Q Consensus 201 g~-~lyv~~~~~--~~~i~~~~~~~-~~~~~~~~~g~pd~i~~d~~G~lwva~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 276 (351)
+. .+..+..++ ++| +...++ ...+. ...+....+++.++|.-++++..
T Consensus 238 ~~~~la~g~~d~~i~~w--d~~~~~~~~~~~-~~~~~v~~l~~sp~~~~~lasgs------------------------- 289 (357)
T 4g56_B 238 KDDTFACGDETGNVSLV--NIKNPDSAQTSA-VHSQNITGLAYSYHSSPFLASIS------------------------- 289 (357)
T ss_dssp STTEEEEEESSSCEEEE--ESSCGGGCEEEC-CCSSCEEEEEECSSSSCCEEEEE-------------------------
T ss_pred ccceEEEeecccceeEE--ECCCCcEeEEEe-ccceeEEEEEEcCCCCCEEEEEe-------------------------
Confidence 65 444455444 444 212222 22222 11222345788888753443322
Q ss_pred hhcccCCCCCCceEEEEEECCCCeEEEEEECCCCCcccceeEEEEE--CCEEEEEecCCCeEEEEeCCCCCC
Q 018705 277 ISLLLPMGSDAGARVVKVDGNDGKIIRDFNDPDATYISFVTSAAEF--DGNLYLASLQSNFIGILPLDGPEP 346 (351)
Q Consensus 277 ~~~~~~~~~~~~~~v~~~~~~~g~~~~~~~~~~g~~~~~~~~~~~~--~g~L~ig~~~~~~i~~~~~~~~~~ 346 (351)
..+.|..+|.++++.+..+ .+. ..++++... ++.++++....+.|..++++....
T Consensus 290 ----------~D~~i~iwd~~~~~~~~~~-~H~----~~V~~vafsP~d~~~l~s~s~Dg~v~iW~~~~~~~ 346 (357)
T 4g56_B 290 ----------EDCTVAVLDADFSEVFRDL-SHR----DFVTGVAWSPLDHSKFTTVGWDHKVLHHHLPSEGR 346 (357)
T ss_dssp ----------TTSCEEEECTTSCEEEEEC-CCS----SCEEEEEECSSSTTEEEEEETTSCEEEEECC----
T ss_pred ----------CCCEEEEEECCCCcEeEEC-CCC----CCEEEEEEeCCCCCEEEEEcCCCeEEEEECCCCCc
Confidence 1134667787566665544 222 357777764 455555444477799999887654
No 171
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=98.74 E-value=7e-06 Score=72.94 Aligned_cols=229 Identities=15% Similarity=0.144 Sum_probs=138.6
Q ss_pred CCCceEEEeeCCCeEEEEEcCCEEEEEEcCCCe----EEEEeecCCccccceEEcCCCCEEEEeCCCCeEEEcCCC--eE
Q 018705 52 NHPEDVSVVVSKGALYTATRDGWVKYFILHNET----LVNWKHIDSQSLLGLTTTKDGGVILCDNEKGLLKVTEEG--VE 125 (351)
Q Consensus 52 ~~pe~i~~d~~~g~lyv~~~~g~I~~~d~~~g~----~~~~~~~~~~p~~gl~~d~~G~L~v~d~~~gl~~~~~~g--~~ 125 (351)
....++++++++..++++..+|.|..|+..+.. ...+........ .+.+ +++++++....+.+++...+ ..
T Consensus 60 ~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~~~~~~~~~~~~~i~-~~~~--~~~~l~~~~~d~~i~~~d~~~~~~ 136 (313)
T 3odt_A 60 GFLNSVCYDSEKELLLFGGKDTMINGVPLFATSGEDPLYTLIGHQGNVC-SLSF--QDGVVISGSWDKTAKVWKEGSLVY 136 (313)
T ss_dssp SCEEEEEEETTTTEEEEEETTSCEEEEETTCCTTSCC-CEECCCSSCEE-EEEE--ETTEEEEEETTSEEEEEETTEEEE
T ss_pred ccEEEEEECCCCCEEEEecCCCeEEEEEeeecCCCCcccchhhcccCEE-EEEe--cCCEEEEEeCCCCEEEEcCCcEEE
Confidence 345688999878889999999999988864432 223322333445 7777 35454444445666655444 44
Q ss_pred EecCCCCCcccEEEcc-CCcEEEEeCCCccCCcccccccccccCCceEEEEeCCCCeEEEeec-CccccceEEEcCCCCE
Q 018705 126 AIVPDASFTNDVIAAS-DGTLYFTVASTKYTPTDFYKDMAEGKPYGQLRKYDPKLKETTVLHE-GFYFANGIALSKNEDF 203 (351)
Q Consensus 126 ~l~~~~~~~n~l~~d~-dG~ly~t~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~~~~~~~~~-~~~~~ngi~~~~dg~~ 203 (351)
.+......+.++++.+ ++...++.+. +|.|..||.. .....+.. .......+++++++.
T Consensus 137 ~~~~~~~~v~~~~~~~~~~~~l~~~~~-----------------d~~i~i~d~~-~~~~~~~~~~~~~i~~~~~~~~~~- 197 (313)
T 3odt_A 137 NLQAHNASVWDAKVVSFSENKFLTASA-----------------DKTIKLWQND-KVIKTFSGIHNDVVRHLAVVDDGH- 197 (313)
T ss_dssp EEECCSSCEEEEEEEETTTTEEEEEET-----------------TSCEEEEETT-EEEEEECSSCSSCEEEEEEEETTE-
T ss_pred ecccCCCceeEEEEccCCCCEEEEEEC-----------------CCCEEEEecC-ceEEEEeccCcccEEEEEEcCCCe-
Confidence 4444335677788777 7766665543 4678888843 22333332 344567899999997
Q ss_pred EEEEecceeEEeecCCCCce-eEEeccCCCCCCceEECCCCCEEEEEecCCchhhhhhhcChhHHHHHHhccchhhcccC
Q 018705 204 VVVCESWKRYWLKGDRAGIL-DAFIENLPGGPDNINLAPDGSFWIGLIKMNQTGVRAIQKCREKWELLDAYPGLISLLLP 282 (351)
Q Consensus 204 lyv~~~~~~~~i~~~~~~~~-~~~~~~~~g~pd~i~~d~~G~lwva~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 282 (351)
++.+..++.+.+-+...++. ..+. ...+....++++++|.+..+...
T Consensus 198 ~~~~~~dg~i~i~d~~~~~~~~~~~-~~~~~i~~~~~~~~~~l~~~~~d------------------------------- 245 (313)
T 3odt_A 198 FISCSNDGLIKLVDMHTGDVLRTYE-GHESFVYCIKLLPNGDIVSCGED------------------------------- 245 (313)
T ss_dssp EEEEETTSEEEEEETTTCCEEEEEE-CCSSCEEEEEECTTSCEEEEETT-------------------------------
T ss_pred EEEccCCCeEEEEECCchhhhhhhh-cCCceEEEEEEecCCCEEEEecC-------------------------------
Confidence 66666655332222222222 2222 22333456788999975555322
Q ss_pred CCCCCceEEEEEECCCCeEEEEEECCCCCcccceeEEEEE-CCEEEEEecCCCeEEEEeCCCCC
Q 018705 283 MGSDAGARVVKVDGNDGKIIRDFNDPDATYISFVTSAAEF-DGNLYLASLQSNFIGILPLDGPE 345 (351)
Q Consensus 283 ~~~~~~~~v~~~~~~~g~~~~~~~~~~g~~~~~~~~~~~~-~g~L~ig~~~~~~i~~~~~~~~~ 345 (351)
+.|..+|..+++.+..+..+.+ .++++... ++++..++. .+.|..+++.+..
T Consensus 246 ------g~v~iwd~~~~~~~~~~~~~~~----~i~~~~~~~~~~~~~~~~-dg~i~iw~~~~~~ 298 (313)
T 3odt_A 246 ------RTVRIWSKENGSLKQVITLPAI----SIWSVDCMSNGDIIVGSS-DNLVRIFSQEKSR 298 (313)
T ss_dssp ------SEEEEECTTTCCEEEEEECSSS----CEEEEEECTTSCEEEEET-TSCEEEEESCGGG
T ss_pred ------CEEEEEECCCCceeEEEeccCc----eEEEEEEccCCCEEEEeC-CCcEEEEeCCCCc
Confidence 4677888767888888876543 46666654 456666554 7789999987654
No 172
>4a9v_A PHOX; hydrolase, beta-propeller; 1.10A {Pseudomonas fluorescens} PDB: 3zwu_A 4a9x_A*
Probab=98.73 E-value=7.6e-08 Score=92.96 Aligned_cols=72 Identities=18% Similarity=0.150 Sum_probs=55.4
Q ss_pred CCCcccEEEccCCcEEE-EeCCCccCCcccccccccccCCceEEEEeCCCCeEEEeecC--ccccceEEEcCCCCEEEEE
Q 018705 131 ASFTNDVIAASDGTLYF-TVASTKYTPTDFYKDMAEGKPYGQLRKYDPKLKETTVLHEG--FYFANGIALSKNEDFVVVC 207 (351)
Q Consensus 131 ~~~~n~l~~d~dG~ly~-t~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~~~~~~~~~~--~~~~ngi~~~~dg~~lyv~ 207 (351)
++.|++|++|++|+||| ||..+ ... ..+++.....||++++.+|+++.+... ...|||++|+||+++|||+
T Consensus 475 fnsPDnL~fd~~G~LWf~TD~~~--~~~----g~~~~~gnn~v~~~dp~tGel~~fl~~P~~aEpnGiafSPD~ktLfV~ 548 (592)
T 4a9v_A 475 FNSPDGLGFDKAGRLWILTDGDS--SNA----GDFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGISFSPDQKTLFVG 548 (592)
T ss_dssp CCCEEEEEECTTCCEEEEECCCC--CCS----GGGTTCCSCEEEEECTTTCCEEEEEECCTTCEEEEEEECTTSSEEEEE
T ss_pred cCCCCceEECCCCCEEEEeCCCc--Ccc----ccccccCCceEEEEeCCCCeEEEEEeCCCCccccCCEECCCCCEEEEE
Confidence 37899999999999999 77642 111 112233455899999999999888754 4679999999999999997
Q ss_pred e
Q 018705 208 E 208 (351)
Q Consensus 208 ~ 208 (351)
-
T Consensus 549 v 549 (592)
T 4a9v_A 549 I 549 (592)
T ss_dssp E
T ss_pred E
Confidence 4
No 173
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=98.72 E-value=1.7e-05 Score=79.68 Aligned_cols=178 Identities=10% Similarity=0.079 Sum_probs=114.7
Q ss_pred CCCceEEEeeCCCeEEEEEcCCEEEEEEcCCCeEE-EEeecCCccccceEEcCCCCEEEEeCCCCeEEEcC-CC--eEEe
Q 018705 52 NHPEDVSVVVSKGALYTATRDGWVKYFILHNETLV-NWKHIDSQSLLGLTTTKDGGVILCDNEKGLLKVTE-EG--VEAI 127 (351)
Q Consensus 52 ~~pe~i~~d~~~g~lyv~~~~g~I~~~d~~~g~~~-~~~~~~~~p~~gl~~d~~G~L~v~d~~~gl~~~~~-~g--~~~l 127 (351)
..-.++++++++..+.++..||.|..||..+++.. .+........ .++++++|+.+++....+.++++. .+ ...+
T Consensus 431 ~~v~~v~~s~~g~~l~sgs~Dg~v~vwd~~~~~~~~~~~~h~~~v~-~~~~s~~~~~l~s~s~D~~i~iwd~~~~~~~~~ 509 (694)
T 3dm0_A 431 HFVEDVVLSSDGQFALSGSWDGELRLWDLAAGVSTRRFVGHTKDVL-SVAFSLDNRQIVSASRDRTIKLWNTLGECKYTI 509 (694)
T ss_dssp SCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEE-EEEECTTSSCEEEEETTSCEEEECTTSCEEEEE
T ss_pred CcEEEEEECCCCCEEEEEeCCCcEEEEECCCCcceeEEeCCCCCEE-EEEEeCCCCEEEEEeCCCEEEEEECCCCcceee
Confidence 34568899977778889999999999998777653 3444445566 899999997666655667777763 33 3333
Q ss_pred cCC----CCCcccEEEccCC--cEEEEeCCCccCCcccccccccccCCceEEEEeCCCCeEEEeec-CccccceEEEcCC
Q 018705 128 VPD----ASFTNDVIAASDG--TLYFTVASTKYTPTDFYKDMAEGKPYGQLRKYDPKLKETTVLHE-GFYFANGIALSKN 200 (351)
Q Consensus 128 ~~~----~~~~n~l~~d~dG--~ly~t~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~~~~~~~~~-~~~~~ngi~~~~d 200 (351)
... ...++++++++++ .+.++.+. ++.|..||..+++...... .....+.++++|+
T Consensus 510 ~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~-----------------d~~v~vwd~~~~~~~~~~~~h~~~v~~v~~spd 572 (694)
T 3dm0_A 510 SEGGEGHRDWVSCVRFSPNTLQPTIVSASW-----------------DKTVKVWNLSNCKLRSTLAGHTGYVSTVAVSPD 572 (694)
T ss_dssp CSSTTSCSSCEEEEEECSCSSSCEEEEEET-----------------TSCEEEEETTTCCEEEEECCCSSCEEEEEECTT
T ss_pred ccCCCCCCCcEEEEEEeCCCCcceEEEEeC-----------------CCeEEEEECCCCcEEEEEcCCCCCEEEEEEeCC
Confidence 221 1457888999886 35555443 4678899987766544333 3345678999999
Q ss_pred CCEEEEEecce--eEEeecCCCCceeEEeccCCCCCCceEECCCCCEEEEEe
Q 018705 201 EDFVVVCESWK--RYWLKGDRAGILDAFIENLPGGPDNINLAPDGSFWIGLI 250 (351)
Q Consensus 201 g~~lyv~~~~~--~~~i~~~~~~~~~~~~~~~~g~pd~i~~d~~G~lwva~~ 250 (351)
++.|..+..++ ++|-. ..++. +..-........++++++|.+.++..
T Consensus 573 g~~l~sg~~Dg~i~iwd~--~~~~~-~~~~~~~~~v~~~~~sp~~~~l~~~~ 621 (694)
T 3dm0_A 573 GSLCASGGKDGVVLLWDL--AEGKK-LYSLEANSVIHALCFSPNRYWLCAAT 621 (694)
T ss_dssp SSEEEEEETTSBCEEEET--TTTEE-EECCBCSSCEEEEEECSSSSEEEEEE
T ss_pred CCEEEEEeCCCeEEEEEC--CCCce-EEEecCCCcEEEEEEcCCCcEEEEEc
Confidence 99766666665 56622 22221 11111222345678888887666543
No 174
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=98.71 E-value=6.5e-06 Score=76.05 Aligned_cols=245 Identities=11% Similarity=-0.000 Sum_probs=140.1
Q ss_pred EecCCCcCCCceEEEeeCCCeEEEEEcCCEEEEEEcCCCe-------EEEEeecCCccccceEEcCC----C---CEEEE
Q 018705 45 KLGEGCVNHPEDVSVVVSKGALYTATRDGWVKYFILHNET-------LVNWKHIDSQSLLGLTTTKD----G---GVILC 110 (351)
Q Consensus 45 ~i~~~~~~~pe~i~~d~~~g~lyv~~~~g~I~~~d~~~g~-------~~~~~~~~~~p~~gl~~d~~----G---~L~v~ 110 (351)
....+.-..-.++++++ +.++++..+|.|..|+..+++ ...+........ .+++.++ | +++++
T Consensus 10 ~~~~~h~~~i~~~~~~~--~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~h~~~v~-~~~~~~~~~~~g~~~~~l~s 86 (397)
T 1sq9_A 10 NAGKAHDADIFSVSACN--SFTVSCSGDGYLKVWDNKLLDNENPKDKSYSHFVHKSGLH-HVDVLQAIERDAFELCLVAT 86 (397)
T ss_dssp EESSCSSSCEEEEEECS--SEEEEEETTSEEEEEESBCCTTCCGGGGEEEEECCTTCEE-EEEEEEEEETTTEEEEEEEE
T ss_pred hhhhhhhcCeEEEEecC--CeEEEEcCCCEEEEEECCCcccccCCCcceEEecCCCcEE-EEEEecccccCCccccEEEE
Confidence 33344334456889984 788999999999999987776 444444444456 8999988 8 76665
Q ss_pred eCCCCeEEEc--CCC-e------EEecCC-----CCCcccEEEc----cCCcE-EEEeCCCccCCcccccccccccCCce
Q 018705 111 DNEKGLLKVT--EEG-V------EAIVPD-----ASFTNDVIAA----SDGTL-YFTVASTKYTPTDFYKDMAEGKPYGQ 171 (351)
Q Consensus 111 d~~~gl~~~~--~~g-~------~~l~~~-----~~~~n~l~~d----~dG~l-y~t~~~~~~~~~~~~~~~~~~~~~g~ 171 (351)
....+.+++. .++ . ..+... ...+.++++. ++|.. +++.+. +|.
T Consensus 87 ~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~~-----------------dg~ 149 (397)
T 1sq9_A 87 TSFSGDLLFYRITREDETKKVIFEKLDLLDSDMKKHSFWALKWGASNDRLLSHRLVATDV-----------------KGT 149 (397)
T ss_dssp EETTSCEEEEEEEECTTTCCEEEEEECCSCTTGGGSCEEEEEEECCC----CEEEEEEET-----------------TSC
T ss_pred EcCCCCEEEEEccCCcccccccceeecccccccCCCcEEEEEEeeccCCCCceEEEEEeC-----------------CCc
Confidence 4445544444 122 2 223222 2568889999 88876 665543 356
Q ss_pred EEEEeCCC------Ce-EE-----Eee-------cCccccceEEEcCCCCEEEEEecceeEEeecCCCCce-eEEecc--
Q 018705 172 LRKYDPKL------KE-TT-----VLH-------EGFYFANGIALSKNEDFVVVCESWKRYWLKGDRAGIL-DAFIEN-- 229 (351)
Q Consensus 172 l~~~d~~~------~~-~~-----~~~-------~~~~~~ngi~~~~dg~~lyv~~~~~~~~i~~~~~~~~-~~~~~~-- 229 (351)
|..||..+ ++ +. .+. ........+++++++ .++++..++.+.+-+...++. ..+. .
T Consensus 150 i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~l~~~~~dg~i~i~d~~~~~~~~~~~-~~~ 227 (397)
T 1sq9_A 150 TYIWKFHPFADESNSLTLNWSPTLELQGTVESPMTPSQFATSVDISERG-LIATGFNNGTVQISELSTLRPLYNFE-SQH 227 (397)
T ss_dssp EEEEEEESSSSHHHHTTTCCCCEEEEEEEECCSSSSCCCCCEEEECTTS-EEEEECTTSEEEEEETTTTEEEEEEE-CCC
T ss_pred EEEEeCCccccccccceeeccCcceeeeeeccccCCCCCceEEEECCCc-eEEEEeCCCcEEEEECCCCceeEEEe-ccc
Confidence 77776544 21 11 221 123456789999999 777776655322222222222 2222 2
Q ss_pred -C---CCCCCceEECCCCCEEEEEecCCchhhhhhhcChhHHHHHHhccchhhcccCCCCCCceEEEEEECCCCeEEEEE
Q 018705 230 -L---PGGPDNINLAPDGSFWIGLIKMNQTGVRAIQKCREKWELLDAYPGLISLLLPMGSDAGARVVKVDGNDGKIIRDF 305 (351)
Q Consensus 230 -~---~g~pd~i~~d~~G~lwva~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~g~~~~~~ 305 (351)
. ......++++++|++.++.... ...+.|..+|..+++.+..+
T Consensus 228 ~h~~~~~~i~~i~~~~~~~~l~~~~~d---------------------------------~~~g~i~i~d~~~~~~~~~~ 274 (397)
T 1sq9_A 228 SMINNSNSIRSVKFSPQGSLLAIAHDS---------------------------------NSFGCITLYETEFGERIGSL 274 (397)
T ss_dssp ---CCCCCEEEEEECSSTTEEEEEEEE---------------------------------TTEEEEEEEETTTCCEEEEE
T ss_pred cccccCCccceEEECCCCCEEEEEecC---------------------------------CCCceEEEEECCCCccccee
Confidence 1 2334567889999866654321 01146777887577777777
Q ss_pred ECCCC---------CcccceeEEEEE--CCEEEEEecCCCeEEEEeCCCCC
Q 018705 306 NDPDA---------TYISFVTSAAEF--DGNLYLASLQSNFIGILPLDGPE 345 (351)
Q Consensus 306 ~~~~g---------~~~~~~~~~~~~--~g~L~ig~~~~~~i~~~~~~~~~ 345 (351)
..+.. .....++++... +..|+.++ ..+.|..++++..+
T Consensus 275 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-~dg~i~iwd~~~~~ 324 (397)
T 1sq9_A 275 SVPTHSSQASLGEFAHSSWVMSLSFNDSGETLCSAG-WDGKLRFWDVKTKE 324 (397)
T ss_dssp CBC--------CCBSBSSCEEEEEECSSSSEEEEEE-TTSEEEEEETTTTE
T ss_pred ccCcccccccccccccCCcEEEEEECCCCCEEEEEe-CCCeEEEEEcCCCc
Confidence 54100 012346666654 33455554 46778888886543
No 175
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=98.71 E-value=2.7e-06 Score=79.36 Aligned_cols=178 Identities=12% Similarity=0.032 Sum_probs=111.2
Q ss_pred CCceEEEee-CCCeEEEEEcCCEEEEEEcCCCe--------EEEEeecCCccccceEEcCCC-CEEEEeCCCCeEEEc--
Q 018705 53 HPEDVSVVV-SKGALYTATRDGWVKYFILHNET--------LVNWKHIDSQSLLGLTTTKDG-GVILCDNEKGLLKVT-- 120 (351)
Q Consensus 53 ~pe~i~~d~-~~g~lyv~~~~g~I~~~d~~~g~--------~~~~~~~~~~p~~gl~~d~~G-~L~v~d~~~gl~~~~-- 120 (351)
...+++++| ++..++++..||.|..|+..+++ ...+........ .+++.++| +++++....+.+++.
T Consensus 83 ~V~~~~~~p~~~~~l~s~s~dg~v~vw~~~~~~~~~~~~~~~~~~~~h~~~v~-~~~~~p~~~~~l~s~~~dg~i~iwd~ 161 (402)
T 2aq5_A 83 PVLDIAWCPHNDNVIASGSEDCTVMVWEIPDGGLVLPLREPVITLEGHTKRVG-IVAWHPTAQNVLLSAGCDNVILVWDV 161 (402)
T ss_dssp CEEEEEECTTCTTEEEEEETTSEEEEEECCTTCCSSCBCSCSEEEECCSSCEE-EEEECSSBTTEEEEEETTSCEEEEET
T ss_pred CEEEEEeCCCCCCEEEEEeCCCeEEEEEccCCCCccccCCceEEecCCCCeEE-EEEECcCCCCEEEEEcCCCEEEEEEC
Confidence 446889997 66788899999999999987663 233333445566 89999998 566655455555555
Q ss_pred CCC--eEEe--cCCCCCcccEEEccCCcEEEEeCCCccCCcccccccccccCCceEEEEeCCCCeEEEee-cCc--cccc
Q 018705 121 EEG--VEAI--VPDASFTNDVIAASDGTLYFTVASTKYTPTDFYKDMAEGKPYGQLRKYDPKLKETTVLH-EGF--YFAN 193 (351)
Q Consensus 121 ~~g--~~~l--~~~~~~~n~l~~d~dG~ly~t~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~~~~~~~~-~~~--~~~n 193 (351)
.++ ...+ ......+.+++++++|.++++.+. +|.|..||..+++..... ... ..+.
T Consensus 162 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-----------------d~~i~iwd~~~~~~~~~~~~~~~~~~~~ 224 (402)
T 2aq5_A 162 GTGAAVLTLGPDVHPDTIYSVDWSRDGALICTSCR-----------------DKRVRVIEPRKGTVVAEKDRPHEGTRPV 224 (402)
T ss_dssp TTTEEEEEECTTTCCSCEEEEEECTTSSCEEEEET-----------------TSEEEEEETTTTEEEEEEECSSCSSSCC
T ss_pred CCCCccEEEecCCCCCceEEEEECCCCCEEEEEec-----------------CCcEEEEeCCCCceeeeeccCCCCCcce
Confidence 355 4455 223367889999999976666543 468999998877754433 222 2367
Q ss_pred eEEEcCCCCEEEEE---ecceeEEeecCCCCc--eeEEeccCCCCCCceEECCCCCEEEE
Q 018705 194 GIALSKNEDFVVVC---ESWKRYWLKGDRAGI--LDAFIENLPGGPDNINLAPDGSFWIG 248 (351)
Q Consensus 194 gi~~~~dg~~lyv~---~~~~~~~i~~~~~~~--~~~~~~~~~g~pd~i~~d~~G~lwva 248 (351)
.++++++++.++++ ..++.+.+-+...+. ..............++++++|++.+.
T Consensus 225 ~~~~~~~~~~l~~g~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~ 284 (402)
T 2aq5_A 225 HAVFVSEGKILTTGFSRMSERQVALWDTKHLEEPLSLQELDTSSGVLLPFFDPDTNIVYL 284 (402)
T ss_dssp EEEECSTTEEEEEEECTTCCEEEEEEETTBCSSCSEEEECCCCSSCEEEEEETTTTEEEE
T ss_pred EEEEcCCCcEEEEeccCCCCceEEEEcCccccCCceEEeccCCCceeEEEEcCCCCEEEE
Confidence 89999999866555 334422222211111 11221112223456788999985543
No 176
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=98.71 E-value=5.7e-06 Score=76.59 Aligned_cols=243 Identities=13% Similarity=0.063 Sum_probs=129.5
Q ss_pred eEecCCCcCCCceEEEeeCCCeEEEEEc----------CCEEEEEEcCCCeEE-EEeec------CCccccceEEcCCC-
Q 018705 44 TKLGEGCVNHPEDVSVVVSKGALYTATR----------DGWVKYFILHNETLV-NWKHI------DSQSLLGLTTTKDG- 105 (351)
Q Consensus 44 ~~i~~~~~~~pe~i~~d~~~g~lyv~~~----------~g~I~~~d~~~g~~~-~~~~~------~~~p~~gl~~d~~G- 105 (351)
..+..+ ..| .++++|++..+|++.. ++.|..||..+++.. .+... +..|. +++++++|
T Consensus 45 ~~i~~g--~~p-~i~~spdg~~lyv~~~~~~~~~~g~~~~~v~v~d~~t~~~~~~i~~~~~~~~~g~~p~-~i~~spdg~ 120 (361)
T 2oiz_A 45 GMVPTA--FNG-HVQVSNDGKKIYTMTTYHERITRGKRSDVVEVWDADKLTFEKEISLPPKRVQGLNYDG-LFRQTTDGK 120 (361)
T ss_dssp EEEECC--EEE-EEEECTTSSEEEEEEEEETTSSSSCEEEEEEEEETTTCCEEEEEEECTTBCCBCCCGG-GEEECTTSS
T ss_pred EEecCC--CCC-ceEECCCCCEEEEEEecccccccCCCCCEEEEEECcCCcEEEEEEcCccccccCCCcc-eEEECCCCC
Confidence 345554 468 9999988889999863 466999998776653 33221 34689 99999999
Q ss_pred CEEEEeCC--CCeEEEcC-CC--eEE-ecCCCCCcccEEEccCC-cEEEEeCCCccCCcccccccccccCCceEEEEeCC
Q 018705 106 GVILCDNE--KGLLKVTE-EG--VEA-IVPDASFTNDVIAASDG-TLYFTVASTKYTPTDFYKDMAEGKPYGQLRKYDPK 178 (351)
Q Consensus 106 ~L~v~d~~--~gl~~~~~-~g--~~~-l~~~~~~~n~l~~d~dG-~ly~t~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~ 178 (351)
.||+++.. +.+..++. ++ +.. +... ....+.+.|+| ..|++.+. +|.+..++.+
T Consensus 121 ~l~v~n~~~~~~v~v~d~~~~~~~~~~i~~~--~~~~v~~~p~~~~~~~~~~~-----------------dg~~~~v~~~ 181 (361)
T 2oiz_A 121 FIVLQNASPATSIGIVDVAKGDYVEDVTAAA--GCWSVIPQPNRPRSFMTICG-----------------DGGLLTINLG 181 (361)
T ss_dssp EEEEEEESSSEEEEEEETTTTEEEEEEGGGT--TEEEEEECTTSSSEEEEEET-----------------TSSEEEEEEC
T ss_pred EEEEECCCCCCeEEEEECCCCcEEEEEecCC--CcceeEEcCCCCeeEEEECC-----------------CCcEEEEEEC
Confidence 48888753 34666663 44 333 3221 11123344444 34443322 2333333221
Q ss_pred -CCeEEE------eecCccccceEEEcCCCCEEEEEecceeEEeecCCCCceeEEe----------c--cCCCCCCceEE
Q 018705 179 -LKETTV------LHEGFYFANGIALSKNEDFVVVCESWKRYWLKGDRAGILDAFI----------E--NLPGGPDNINL 239 (351)
Q Consensus 179 -~~~~~~------~~~~~~~~ngi~~~~dg~~lyv~~~~~~~~i~~~~~~~~~~~~----------~--~~~g~pd~i~~ 239 (351)
+++... .......|-.+..+++++.+++....+.+.+.+.......... . ..|+.+..+++
T Consensus 182 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~v~v~d~~~~~~~~~~~~~~~~~~~~~~~~~p~g~~~~a~ 261 (361)
T 2oiz_A 182 EDGKVASQSRSKQMFSVKDDPIFIAPALDKDKAHFVSYYGNVYSADFSGDEVKVDGPWSLLNDEDKAKNWVPGGYNLVGL 261 (361)
T ss_dssp TTSSEEEEEECCCCSCTTTSCBCSCCEECSSEEEEEBTTSEEEEEECSSSSCEEEEEEESCCHHHHHTTCEECCSSCEEE
T ss_pred CCCcEeeeccccceEcCCCCceEEEecccCCEEEEEeCCCeEEEEEecCCCceecccccccCccccccccccCCeeEEEE
Confidence 122220 1111122333444566655555444332222111111111100 0 01222334888
Q ss_pred CCCC-CEEEEEe-cCCchhhhhhhcChhHHHHHHhccchhhcccCCCCCCceEEEEEECCCCeEEEEEECCCCCccccee
Q 018705 240 APDG-SFWIGLI-KMNQTGVRAIQKCREKWELLDAYPGLISLLLPMGSDAGARVVKVDGNDGKIIRDFNDPDATYISFVT 317 (351)
Q Consensus 240 d~~G-~lwva~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~g~~~~~~~~~~g~~~~~~~ 317 (351)
+++| ++|++.. ...... .......|..+|.++++.+..+..+. +.
T Consensus 262 ~~dg~~lyv~~~~~~~~~~---------------------------~~~~~~~v~viD~~t~~~v~~i~~~~------p~ 308 (361)
T 2oiz_A 262 HRASGRMYVFMHPDGKEGT---------------------------HKFPAAEIWVMDTKTKQRVARIPGRD------AL 308 (361)
T ss_dssp ETTTTEEEEEEESSCCTTC---------------------------TTCCCSEEEEEETTTTEEEEEEECTT------CC
T ss_pred ecCCCeEEEEEccCCCccc---------------------------ccCCCceEEEEECCCCcEEEEEecCC------ee
Confidence 9885 5899865 210000 00112468899998889998887532 34
Q ss_pred EEEE--ECCEEEEEecCCCeEEEEeCCCC
Q 018705 318 SAAE--FDGNLYLASLQSNFIGILPLDGP 344 (351)
Q Consensus 318 ~~~~--~~g~L~ig~~~~~~i~~~~~~~~ 344 (351)
++.. ++..||+++. +.|.++++.+-
T Consensus 309 ~ia~spdg~~l~v~n~--~~v~v~D~~t~ 335 (361)
T 2oiz_A 309 SMTIDQQRNLMLTLDG--GNVNVYDISQP 335 (361)
T ss_dssp EEEEETTTTEEEEECS--SCEEEEECSSS
T ss_pred EEEECCCCCEEEEeCC--CeEEEEECCCC
Confidence 4444 4568998874 88999998765
No 177
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=98.71 E-value=3.3e-06 Score=78.15 Aligned_cols=182 Identities=12% Similarity=0.060 Sum_probs=115.8
Q ss_pred CceEEEeeCCCeEEEEE--cCCEEEEEEcCCCeEEEEeecCCccccceEEcCCCCEEEEeCCCCeEEEcC-CC--eEEec
Q 018705 54 PEDVSVVVSKGALYTAT--RDGWVKYFILHNETLVNWKHIDSQSLLGLTTTKDGGVILCDNEKGLLKVTE-EG--VEAIV 128 (351)
Q Consensus 54 pe~i~~d~~~g~lyv~~--~~g~I~~~d~~~g~~~~~~~~~~~p~~gl~~d~~G~L~v~d~~~gl~~~~~-~g--~~~l~ 128 (351)
..+++++|++..+.+++ .++.|..||..+++............ .+++.++|+++++....++..++. ++ .....
T Consensus 136 ~~~v~fSpDg~~la~as~~~d~~i~iwd~~~~~~~~~~~~~~~V~-~v~fspdg~~l~s~s~~~~~~~~~~~~~~~~~~~ 214 (365)
T 4h5i_A 136 TKLVYISREGTVAAIASSKVPAIMRIIDPSDLTEKFEIETRGEVK-DLHFSTDGKVVAYITGSSLEVISTVTGSCIARKT 214 (365)
T ss_dssp EEEEEECTTSSCEEEEESCSSCEEEEEETTTTEEEEEEECSSCCC-EEEECTTSSEEEEECSSCEEEEETTTCCEEEEEC
T ss_pred EEEEEEcCCCCEEEEEECCCCCEEEEeECCCCcEEEEeCCCCceE-EEEEccCCceEEeccceeEEEEEeccCcceeeee
Confidence 34789998777777765 57889999998887644334455677 999999999888777777888874 55 22222
Q ss_pred C--CCCCcccEEEccCCcEEEEeCCCccCCcccccccccccCCceEEEEeCCCCeEEE-----eecCccccceEEEcCCC
Q 018705 129 P--DASFTNDVIAASDGTLYFTVASTKYTPTDFYKDMAEGKPYGQLRKYDPKLKETTV-----LHEGFYFANGIALSKNE 201 (351)
Q Consensus 129 ~--~~~~~n~l~~d~dG~ly~t~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~~~~~~-----~~~~~~~~ngi~~~~dg 201 (351)
. ....++.+++.|||...++.+... .....++.++...+.... +.......+.++++|||
T Consensus 215 ~~~~~~~v~~v~fspdg~~l~~~s~d~-------------~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~Spdg 281 (365)
T 4h5i_A 215 DFDKNWSLSKINFIADDTVLIAASLKK-------------GKGIVLTKISIKSGNTSVLRSKQVTNRFKGITSMDVDMKG 281 (365)
T ss_dssp CCCTTEEEEEEEEEETTEEEEEEEESS-------------SCCEEEEEEEEETTEEEEEEEEEEESSCSCEEEEEECTTS
T ss_pred cCCCCCCEEEEEEcCCCCEEEEEecCC-------------cceeEEeecccccceecceeeeeecCCCCCeEeEEECCCC
Confidence 1 125678899999998776654210 001135666654443322 22233446789999999
Q ss_pred CEEEEEecce--eEEeecCCCCce-eEEeccCCCCCCceEECCCCCEEEEEec
Q 018705 202 DFVVVCESWK--RYWLKGDRAGIL-DAFIENLPGGPDNINLAPDGSFWIGLIK 251 (351)
Q Consensus 202 ~~lyv~~~~~--~~~i~~~~~~~~-~~~~~~~~g~pd~i~~d~~G~lwva~~~ 251 (351)
++|..+..++ ++|- ...++. ..+.....+....++++++|++.++...
T Consensus 282 ~~lasgs~D~~V~iwd--~~~~~~~~~~~~gH~~~V~~v~fSpdg~~laS~S~ 332 (365)
T 4h5i_A 282 ELAVLASNDNSIALVK--LKDLSMSKIFKQAHSFAITEVTISPDSTYVASVSA 332 (365)
T ss_dssp CEEEEEETTSCEEEEE--TTTTEEEEEETTSSSSCEEEEEECTTSCEEEEEET
T ss_pred CceEEEcCCCEEEEEE--CCCCcEEEEecCcccCCEEEEEECCCCCEEEEEeC
Confidence 9777777666 5652 222332 2222222333456899999998887654
No 178
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=98.70 E-value=3.4e-05 Score=76.36 Aligned_cols=179 Identities=11% Similarity=0.057 Sum_probs=112.5
Q ss_pred CCceEEEeeCCCeEEEEEcCCEEEEEEcCCCe--E-EEEeecCCccccceEEcCCCCEEEEeCCC----CeEEEcCCC--
Q 018705 53 HPEDVSVVVSKGALYTATRDGWVKYFILHNET--L-VNWKHIDSQSLLGLTTTKDGGVILCDNEK----GLLKVTEEG-- 123 (351)
Q Consensus 53 ~pe~i~~d~~~g~lyv~~~~g~I~~~d~~~g~--~-~~~~~~~~~p~~gl~~d~~G~L~v~d~~~----gl~~~~~~g-- 123 (351)
.-.+++++|++..+.++..||.|..||..+++ . ..+....+... .++++++|+.+++.... +.+++...+
T Consensus 61 ~v~~~~~spdg~~lasg~~d~~v~lWd~~~~~~~~~~~~~~~~~~v~-~v~fs~dg~~l~~~~~~~~~~~~v~~wd~~~~ 139 (611)
T 1nr0_A 61 QTTVAKTSPSGYYCASGDVHGNVRIWDTTQTTHILKTTIPVFSGPVK-DISWDSESKRIAAVGEGRERFGHVFLFDTGTS 139 (611)
T ss_dssp CEEEEEECTTSSEEEEEETTSEEEEEESSSTTCCEEEEEECSSSCEE-EEEECTTSCEEEEEECCSSCSEEEEETTTCCB
T ss_pred ceEEEEECCCCcEEEEEeCCCCEEEeECCCCcceeeEeecccCCceE-EEEECCCCCEEEEEECCCCceeEEEEeeCCCC
Confidence 34578999877788899999999999975442 2 23333344566 99999999866543321 345555544
Q ss_pred eEEecCCCCCcccEEEccCCc-EEEEeCCCccCCcccccccccccCCceEEEEeCCCCeEEEee-cCccccceEEEcCCC
Q 018705 124 VEAIVPDASFTNDVIAASDGT-LYFTVASTKYTPTDFYKDMAEGKPYGQLRKYDPKLKETTVLH-EGFYFANGIALSKNE 201 (351)
Q Consensus 124 ~~~l~~~~~~~n~l~~d~dG~-ly~t~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~~~~~~~~-~~~~~~ngi~~~~dg 201 (351)
...+......++++++.|++. ..++.+. ++.+..||..+++..... ..-...+.++++|||
T Consensus 140 ~~~l~gh~~~v~~v~f~p~~~~~l~s~s~-----------------D~~v~lwd~~~~~~~~~l~~H~~~V~~v~fspdg 202 (611)
T 1nr0_A 140 NGNLTGQARAMNSVDFKPSRPFRIISGSD-----------------DNTVAIFEGPPFKFKSTFGEHTKFVHSVRYNPDG 202 (611)
T ss_dssp CBCCCCCSSCEEEEEECSSSSCEEEEEET-----------------TSCEEEEETTTBEEEEEECCCSSCEEEEEECTTS
T ss_pred cceecCCCCCceEEEECCCCCeEEEEEeC-----------------CCeEEEEECCCCeEeeeeccccCceEEEEECCCC
Confidence 333433336789999999985 4555543 467888887666543333 333457789999999
Q ss_pred CEEEEEecce--eEEeecCCCCce-eEEec------cCCCCCCceEECCCCCEEEEEec
Q 018705 202 DFVVVCESWK--RYWLKGDRAGIL-DAFIE------NLPGGPDNINLAPDGSFWIGLIK 251 (351)
Q Consensus 202 ~~lyv~~~~~--~~~i~~~~~~~~-~~~~~------~~~g~pd~i~~d~~G~lwva~~~ 251 (351)
+.|..+..++ ++|-. ..++. ..+.. ...+....++++++|.+.++...
T Consensus 203 ~~las~s~D~~i~lwd~--~~g~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~s~s~ 259 (611)
T 1nr0_A 203 SLFASTGGDGTIVLYNG--VDGTKTGVFEDDSLKNVAHSGSVFGLTWSPDGTKIASASA 259 (611)
T ss_dssp SEEEEEETTSCEEEEET--TTCCEEEECBCTTSSSCSSSSCEEEEEECTTSSEEEEEET
T ss_pred CEEEEEECCCcEEEEEC--CCCcEeeeeccccccccccCCCEEEEEECCCCCEEEEEeC
Confidence 9666666665 66632 12222 12211 12223455789999987776543
No 179
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=98.69 E-value=2.9e-05 Score=72.39 Aligned_cols=234 Identities=9% Similarity=0.039 Sum_probs=137.8
Q ss_pred CCceEEEeeCCCeEEEEEcCCEEEEEEcCCCeEE-EEeecCCccccceEEcCCCCEEEEeCCCCeEEEc--C-CC--eEE
Q 018705 53 HPEDVSVVVSKGALYTATRDGWVKYFILHNETLV-NWKHIDSQSLLGLTTTKDGGVILCDNEKGLLKVT--E-EG--VEA 126 (351)
Q Consensus 53 ~pe~i~~d~~~g~lyv~~~~g~I~~~d~~~g~~~-~~~~~~~~p~~gl~~d~~G~L~v~d~~~gl~~~~--~-~g--~~~ 126 (351)
...++++++++..++++..+|.|..||..+++.. .+........ .++++ ++++++....+.+++. . .+ ...
T Consensus 136 ~v~~v~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~-~~~~~--~~~l~~~~~dg~i~i~d~~~~~~~~~~ 212 (401)
T 4aez_A 136 YVASVKWSHDGSFLSVGLGNGLVDIYDVESQTKLRTMAGHQARVG-CLSWN--RHVLSSGSRSGAIHHHDVRIANHQIGT 212 (401)
T ss_dssp CEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEE-EEEEE--TTEEEEEETTSEEEEEETTSSSCEEEE
T ss_pred CEEEEEECCCCCEEEEECCCCeEEEEECcCCeEEEEecCCCCceE-EEEEC--CCEEEEEcCCCCEEEEecccCcceeeE
Confidence 3458899977778899999999999998777543 3333334455 77774 4455444445555554 2 23 444
Q ss_pred ecCCCCCcccEEEccCCcEEEEeCCCccCCcccccccccccCCceEEEEeCCCCeEEEee-cCccccceEEEcCCCCEEE
Q 018705 127 IVPDASFTNDVIAASDGTLYFTVASTKYTPTDFYKDMAEGKPYGQLRKYDPKLKETTVLH-EGFYFANGIALSKNEDFVV 205 (351)
Q Consensus 127 l~~~~~~~n~l~~d~dG~ly~t~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~~~~~~~~-~~~~~~ngi~~~~dg~~ly 205 (351)
+......+.+++++++|.++++.+. ++.|..||..+++..... ........++++|++..++
T Consensus 213 ~~~~~~~v~~~~~~~~~~~l~s~~~-----------------d~~v~iwd~~~~~~~~~~~~~~~~v~~~~~~p~~~~ll 275 (401)
T 4aez_A 213 LQGHSSEVCGLAWRSDGLQLASGGN-----------------DNVVQIWDARSSIPKFTKTNHNAAVKAVAWCPWQSNLL 275 (401)
T ss_dssp EECCSSCEEEEEECTTSSEEEEEET-----------------TSCEEEEETTCSSEEEEECCCSSCCCEEEECTTSTTEE
T ss_pred EcCCCCCeeEEEEcCCCCEEEEEeC-----------------CCeEEEccCCCCCccEEecCCcceEEEEEECCCCCCEE
Confidence 4444467889999999987776543 467999998776654333 3344567899999887566
Q ss_pred EEec---ceeEEeecCCCCceeEEeccCCCCCCceEECCCCCEEEEEecCCchhhhhhhcChhHHHHHHhccchhhcccC
Q 018705 206 VCES---WKRYWLKGDRAGILDAFIENLPGGPDNINLAPDGSFWIGLIKMNQTGVRAIQKCREKWELLDAYPGLISLLLP 282 (351)
Q Consensus 206 v~~~---~~~~~i~~~~~~~~~~~~~~~~g~pd~i~~d~~G~lwva~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 282 (351)
++.. ++.+.+-+...++..... ...+....++++++|++.++...
T Consensus 276 ~~~~gs~d~~i~i~d~~~~~~~~~~-~~~~~v~~~~~s~~~~~l~~~~g------------------------------- 323 (401)
T 4aez_A 276 ATGGGTMDKQIHFWNAATGARVNTV-DAGSQVTSLIWSPHSKEIMSTHG------------------------------- 323 (401)
T ss_dssp EEECCTTTCEEEEEETTTCCEEEEE-ECSSCEEEEEECSSSSEEEEEEC-------------------------------
T ss_pred EEecCCCCCEEEEEECCCCCEEEEE-eCCCcEEEEEECCCCCeEEEEee-------------------------------
Confidence 6543 333222222223322111 12233466788999987766432
Q ss_pred CCCCCceEEEEEECCCCeEEEE--EECCCCCcccceeEEEEE-CCEEEEEecCCCeEEEEeCCCCC
Q 018705 283 MGSDAGARVVKVDGNDGKIIRD--FNDPDATYISFVTSAAEF-DGNLYLASLQSNFIGILPLDGPE 345 (351)
Q Consensus 283 ~~~~~~~~v~~~~~~~g~~~~~--~~~~~g~~~~~~~~~~~~-~g~L~ig~~~~~~i~~~~~~~~~ 345 (351)
...+.|..++..+++.... +..+.+ .+..+... ++.+.+.....+.|..+++.+.+
T Consensus 324 ---~~dg~i~v~~~~~~~~~~~~~~~~h~~----~v~~~~~s~dg~~l~s~~~dg~i~iw~~~~~~ 382 (401)
T 4aez_A 324 ---FPDNNLSIWSYSSSGLTKQVDIPAHDT----RVLYSALSPDGRILSTAASDENLKFWRVYDGD 382 (401)
T ss_dssp ---TTTCEEEEEEEETTEEEEEEEEECCSS----CCCEEEECTTSSEEEEECTTSEEEEEECCC--
T ss_pred ---cCCCcEEEEecCCccceeEEEecCCCC----CEEEEEECCCCCEEEEEeCCCcEEEEECCCCc
Confidence 1224566666534444433 333332 45666654 34433333446778888887654
No 180
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=98.69 E-value=3.9e-06 Score=77.55 Aligned_cols=181 Identities=8% Similarity=0.042 Sum_probs=117.1
Q ss_pred CCCceEEEeeCC-CeEEEEEcCCEEEEEEcCCCeEEEEee---cCCccccceEEcC-CCCEEEEeCCCCeEEEc-CCC--
Q 018705 52 NHPEDVSVVVSK-GALYTATRDGWVKYFILHNETLVNWKH---IDSQSLLGLTTTK-DGGVILCDNEKGLLKVT-EEG-- 123 (351)
Q Consensus 52 ~~pe~i~~d~~~-g~lyv~~~~g~I~~~d~~~g~~~~~~~---~~~~p~~gl~~d~-~G~L~v~d~~~gl~~~~-~~g-- 123 (351)
..-.++++++++ ..++++..+|.|..||..+++...... ...... .+++.+ +++++++....+.+++. ..+
T Consensus 74 ~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~h~~~v~-~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~ 152 (383)
T 3ei3_B 74 RRVTSLEWHPTHPTTVAVGSKGGDIILWDYDVQNKTSFIQGMGPGDAIT-GMKFNQFNTNQLFVSSIRGATTLRDFSGSV 152 (383)
T ss_dssp SCEEEEEECSSCTTEEEEEEBTSCEEEEETTSTTCEEEECCCSTTCBEE-EEEEETTEEEEEEEEETTTEEEEEETTSCE
T ss_pred CCEEEEEECCCCCCEEEEEcCCCeEEEEeCCCcccceeeecCCcCCcee-EEEeCCCCCCEEEEEeCCCEEEEEECCCCc
Confidence 445689999766 688899999999999987766544322 334456 899998 56665555455666665 333
Q ss_pred eEEecCCC---CCcccEEEccCCcEEEEeCCCccCCcccccccccccCCceEEEEeCCCCeEEEeecCccccceEEEcCC
Q 018705 124 VEAIVPDA---SFTNDVIAASDGTLYFTVASTKYTPTDFYKDMAEGKPYGQLRKYDPKLKETTVLHEGFYFANGIALSKN 200 (351)
Q Consensus 124 ~~~l~~~~---~~~n~l~~d~dG~ly~t~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~~~~~~~~~~~~~~ngi~~~~d 200 (351)
...+.... ..+.+++++++|.+.++.+. ++.|..||........+.........++++|+
T Consensus 153 ~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-----------------d~~i~i~d~~~~~~~~~~~h~~~v~~~~~~~~ 215 (383)
T 3ei3_B 153 IQVFAKTDSWDYWYCCVDVSVSRQMLATGDS-----------------TGRLLLLGLDGHEIFKEKLHKAKVTHAEFNPR 215 (383)
T ss_dssp EEEEECCCCSSCCEEEEEEETTTTEEEEEET-----------------TSEEEEEETTSCEEEEEECSSSCEEEEEECSS
T ss_pred eEEEeccCCCCCCeEEEEECCCCCEEEEECC-----------------CCCEEEEECCCCEEEEeccCCCcEEEEEECCC
Confidence 44443322 56889999999987766543 56899999865555555544556788999999
Q ss_pred CC-EEEEEecce--eEEe-ecCC-CCceeEEeccCCCCCCceEECC-CCCEEEEEec
Q 018705 201 ED-FVVVCESWK--RYWL-KGDR-AGILDAFIENLPGGPDNINLAP-DGSFWIGLIK 251 (351)
Q Consensus 201 g~-~lyv~~~~~--~~~i-~~~~-~~~~~~~~~~~~g~pd~i~~d~-~G~lwva~~~ 251 (351)
++ .++.+..++ ++|- .... .+...... ...+....+++++ +|++.++...
T Consensus 216 ~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~-~~~~~v~~~~~s~~~~~~l~~~~~ 271 (383)
T 3ei3_B 216 CDWLMATSSVDATVKLWDLRNIKDKNSYIAEM-PHEKPVNAAYFNPTDSTKLLTTDQ 271 (383)
T ss_dssp CTTEEEEEETTSEEEEEEGGGCCSTTCEEEEE-ECSSCEEEEEECTTTSCEEEEEES
T ss_pred CCCEEEEEeCCCEEEEEeCCCCCcccceEEEe-cCCCceEEEEEcCCCCCEEEEEcC
Confidence 98 676666665 4442 2211 12221111 2233456678999 8886665543
No 181
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=98.69 E-value=5.5e-06 Score=77.26 Aligned_cols=240 Identities=13% Similarity=0.029 Sum_probs=140.3
Q ss_pred CCceEEEeeCCCeEE-EEEcCCEEEEEEcCCC-eE----EEEeecCCccccceEEcC-CCCEEEEeCCCCeEEEc--CCC
Q 018705 53 HPEDVSVVVSKGALY-TATRDGWVKYFILHNE-TL----VNWKHIDSQSLLGLTTTK-DGGVILCDNEKGLLKVT--EEG 123 (351)
Q Consensus 53 ~pe~i~~d~~~g~ly-v~~~~g~I~~~d~~~g-~~----~~~~~~~~~p~~gl~~d~-~G~L~v~d~~~gl~~~~--~~g 123 (351)
....++++++...+. .+..+|.|..|+..+. +. ..+........ .+++++ +++++++....+.++++ .++
T Consensus 36 ~~~~~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~h~~~V~-~~~~~p~~~~~l~s~s~dg~v~vw~~~~~ 114 (402)
T 2aq5_A 36 DSGFCAVNPKFMALICEASGGGAFLVLPLGKTGRVDKNVPLVCGHTAPVL-DIAWCPHNDNVIASGSEDCTVMVWEIPDG 114 (402)
T ss_dssp SSCSEEECSSEEEEEBCCSSSCCEEEEETTCCEECCTTCCCBCCCSSCEE-EEEECTTCTTEEEEEETTSEEEEEECCTT
T ss_pred CCCcEEECCCeEEEEEEEcCCCEEEEEECccCCCCCCCCceEecCCCCEE-EEEeCCCCCCEEEEEeCCCeEEEEEccCC
Confidence 345678874333232 2567899999997432 22 11222234456 899998 88877766566766665 222
Q ss_pred ---------eEEecCCCCCcccEEEccCC-cEEEEeCCCccCCcccccccccccCCceEEEEeCCCCeEEEee--c-Ccc
Q 018705 124 ---------VEAIVPDASFTNDVIAASDG-TLYFTVASTKYTPTDFYKDMAEGKPYGQLRKYDPKLKETTVLH--E-GFY 190 (351)
Q Consensus 124 ---------~~~l~~~~~~~n~l~~d~dG-~ly~t~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~~~~~~~~--~-~~~ 190 (351)
...+......+.++++.++| +++++.+. +|.|..||..+++..... . ...
T Consensus 115 ~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~-----------------dg~i~iwd~~~~~~~~~~~~~~~~~ 177 (402)
T 2aq5_A 115 GLVLPLREPVITLEGHTKRVGIVAWHPTAQNVLLSAGC-----------------DNVILVWDVGTGAAVLTLGPDVHPD 177 (402)
T ss_dssp CCSSCBCSCSEEEECCSSCEEEEEECSSBTTEEEEEET-----------------TSCEEEEETTTTEEEEEECTTTCCS
T ss_pred CCccccCCceEEecCCCCeEEEEEECcCCCCEEEEEcC-----------------CCEEEEEECCCCCccEEEecCCCCC
Confidence 23333333678899999998 67777654 467999998877665443 2 234
Q ss_pred ccceEEEcCCCCEEEEEecceeEEeecCCCCce-eEEeccCCC-CCCceEECCCCCEEEEEecCCchhhhhhhcChhHHH
Q 018705 191 FANGIALSKNEDFVVVCESWKRYWLKGDRAGIL-DAFIENLPG-GPDNINLAPDGSFWIGLIKMNQTGVRAIQKCREKWE 268 (351)
Q Consensus 191 ~~ngi~~~~dg~~lyv~~~~~~~~i~~~~~~~~-~~~~~~~~g-~pd~i~~d~~G~lwva~~~~~~~~~~~~~~~~~~~~ 268 (351)
....++++++++.++.+..++.+.+-+...++. ..+.....+ .+..+.+.++|++.++....
T Consensus 178 ~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~---------------- 241 (402)
T 2aq5_A 178 TIYSVDWSRDGALICTSCRDKRVRVIEPRKGTVVAEKDRPHEGTRPVHAVFVSEGKILTTGFSR---------------- 241 (402)
T ss_dssp CEEEEEECTTSSCEEEEETTSEEEEEETTTTEEEEEEECSSCSSSCCEEEECSTTEEEEEEECT----------------
T ss_pred ceEEEEECCCCCEEEEEecCCcEEEEeCCCCceeeeeccCCCCCcceEEEEcCCCcEEEEeccC----------------
Confidence 567899999999777776666333223222332 222112222 25668889999876665321
Q ss_pred HHHhccchhhcccCCCCCCceEEEEEECCCCeE-EEEEECCCCCcccceeEEEEE--CCEEEEEecCCCeEEEEeCCCCC
Q 018705 269 LLDAYPGLISLLLPMGSDAGARVVKVDGNDGKI-IRDFNDPDATYISFVTSAAEF--DGNLYLASLQSNFIGILPLDGPE 345 (351)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~g~~-~~~~~~~~g~~~~~~~~~~~~--~g~L~ig~~~~~~i~~~~~~~~~ 345 (351)
...+.|..+|..+++. +....... ...+..+... +..|++++...+.|..+++.+.+
T Consensus 242 -----------------~~d~~i~iwd~~~~~~~~~~~~~~~---~~~v~~~~~s~~~~~l~~~g~~dg~i~i~d~~~~~ 301 (402)
T 2aq5_A 242 -----------------MSERQVALWDTKHLEEPLSLQELDT---SSGVLLPFFDPDTNIVYLCGKGDSSIRYFEITSEA 301 (402)
T ss_dssp -----------------TCCEEEEEEETTBCSSCSEEEECCC---CSSCEEEEEETTTTEEEEEETTCSCEEEEEECSST
T ss_pred -----------------CCCceEEEEcCccccCCceEEeccC---CCceeEEEEcCCCCEEEEEEcCCCeEEEEEecCCC
Confidence 1234677777733332 22222111 1235555544 35677666557778888888776
Q ss_pred C
Q 018705 346 P 346 (351)
Q Consensus 346 ~ 346 (351)
|
T Consensus 302 ~ 302 (402)
T 2aq5_A 302 P 302 (402)
T ss_dssp T
T ss_pred c
Confidence 5
No 182
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=98.68 E-value=9e-06 Score=81.70 Aligned_cols=180 Identities=15% Similarity=0.173 Sum_probs=112.2
Q ss_pred CCCceEEEeeCC-CeEEEEEcCCEEEEEEcCCC-----eE-EEEeecCCccccceEEcCCCCEEEEeCCCCeEEEcC--C
Q 018705 52 NHPEDVSVVVSK-GALYTATRDGWVKYFILHNE-----TL-VNWKHIDSQSLLGLTTTKDGGVILCDNEKGLLKVTE--E 122 (351)
Q Consensus 52 ~~pe~i~~d~~~-g~lyv~~~~g~I~~~d~~~g-----~~-~~~~~~~~~p~~gl~~d~~G~L~v~d~~~gl~~~~~--~ 122 (351)
..-.++++.+++ ..|.++..||.|..|+..++ .. ..+........ .+++.++|++.++....+.++++. +
T Consensus 383 ~~V~~v~~~~~~~~~l~s~s~D~~i~~W~~~~~~~~~~~~~~~~~~h~~~v~-~v~~s~~g~~l~sgs~Dg~v~vwd~~~ 461 (694)
T 3dm0_A 383 DMVTAIATPIDNADIIVSASRDKSIILWKLTKDDKAYGVAQRRLTGHSHFVE-DVVLSSDGQFALSGSWDGELRLWDLAA 461 (694)
T ss_dssp SCEEEEECCTTCCSEEEEEETTSEEEEEECCCSTTCSCEEEEEEECCSSCEE-EEEECTTSSEEEEEETTSEEEEEETTT
T ss_pred ceeEEEEecCCCCCEEEEEeCCCcEEEEEccCCCcccccccceecCCCCcEE-EEEECCCCCEEEEEeCCCcEEEEECCC
Confidence 344577887554 46778899999999987543 11 23333334456 899999998877766677777773 5
Q ss_pred C--eEEecCCCCCcccEEEccCCcEEEEeCCCccCCcccccccccccCCceEEEEeCCCCeEEEeecC----ccccceEE
Q 018705 123 G--VEAIVPDASFTNDVIAASDGTLYFTVASTKYTPTDFYKDMAEGKPYGQLRKYDPKLKETTVLHEG----FYFANGIA 196 (351)
Q Consensus 123 g--~~~l~~~~~~~n~l~~d~dG~ly~t~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~~~~~~~~~~----~~~~ngi~ 196 (351)
+ ...+......+.+++++++|+..++.+. ++.|..||..+.....+... .....+++
T Consensus 462 ~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~-----------------D~~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~ 524 (694)
T 3dm0_A 462 GVSTRRFVGHTKDVLSVAFSLDNRQIVSASR-----------------DRTIKLWNTLGECKYTISEGGEGHRDWVSCVR 524 (694)
T ss_dssp TEEEEEEECCSSCEEEEEECTTSSCEEEEET-----------------TSCEEEECTTSCEEEEECSSTTSCSSCEEEEE
T ss_pred CcceeEEeCCCCCEEEEEEeCCCCEEEEEeC-----------------CCEEEEEECCCCcceeeccCCCCCCCcEEEEE
Confidence 5 4455444467889999999987777654 46788888754433333221 12356889
Q ss_pred EcCCC--CEEEEEecce--eEEeecCCCCceeEEeccCCCCCCceEECCCCCEEEEEec
Q 018705 197 LSKNE--DFVVVCESWK--RYWLKGDRAGILDAFIENLPGGPDNINLAPDGSFWIGLIK 251 (351)
Q Consensus 197 ~~~dg--~~lyv~~~~~--~~~i~~~~~~~~~~~~~~~~g~pd~i~~d~~G~lwva~~~ 251 (351)
+++++ ..+..+..++ ++|-. ..++.........+....++++++|++.++...
T Consensus 525 ~~~~~~~~~l~s~s~d~~v~vwd~--~~~~~~~~~~~h~~~v~~v~~spdg~~l~sg~~ 581 (694)
T 3dm0_A 525 FSPNTLQPTIVSASWDKTVKVWNL--SNCKLRSTLAGHTGYVSTVAVSPDGSLCASGGK 581 (694)
T ss_dssp ECSCSSSCEEEEEETTSCEEEEET--TTCCEEEEECCCSSCEEEEEECTTSSEEEEEET
T ss_pred EeCCCCcceEEEEeCCCeEEEEEC--CCCcEEEEEcCCCCCEEEEEEeCCCCEEEEEeC
Confidence 99987 3455555555 55522 222222112122333456789999997776543
No 183
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=98.67 E-value=3.7e-06 Score=77.85 Aligned_cols=98 Identities=14% Similarity=0.128 Sum_probs=59.5
Q ss_pred EEEccCC-cEEEEeC-CCccCCcccccccccccCCceEEEEeCCCCeEEEeecCccccceEEEcCCCCEEEEEecceeEE
Q 018705 137 VIAASDG-TLYFTVA-STKYTPTDFYKDMAEGKPYGQLRKYDPKLKETTVLHEGFYFANGIALSKNEDFVVVCESWKRYW 214 (351)
Q Consensus 137 l~~d~dG-~ly~t~~-~~~~~~~~~~~~~~~~~~~g~l~~~d~~~~~~~~~~~~~~~~ngi~~~~dg~~lyv~~~~~~~~ 214 (351)
+++++|| ++|++.. ...... .....+.|+.||.++++......... |.+|+++|||++||++.. +.+.
T Consensus 259 ~a~~~dg~~lyv~~~~~~~~~~--------~~~~~~~v~viD~~t~~~v~~i~~~~-p~~ia~spdg~~l~v~n~-~~v~ 328 (361)
T 2oiz_A 259 VGLHRASGRMYVFMHPDGKEGT--------HKFPAAEIWVMDTKTKQRVARIPGRD-ALSMTIDQQRNLMLTLDG-GNVN 328 (361)
T ss_dssp EEEETTTTEEEEEEESSCCTTC--------TTCCCSEEEEEETTTTEEEEEEECTT-CCEEEEETTTTEEEEECS-SCEE
T ss_pred EEEecCCCeEEEEEccCCCccc--------ccCCCceEEEEECCCCcEEEEEecCC-eeEEEECCCCCEEEEeCC-CeEE
Confidence 6777774 6777653 100000 00123579999999887655444444 999999999999999876 5222
Q ss_pred eecCCCC--ceeEEeccCCCCCCceEECCCCC
Q 018705 215 LKGDRAG--ILDAFIENLPGGPDNINLAPDGS 244 (351)
Q Consensus 215 i~~~~~~--~~~~~~~~~~g~pd~i~~d~~G~ 244 (351)
+-+...+ +....+......|.+++++++|+
T Consensus 329 v~D~~t~~l~~~~~i~~~G~~P~~~~~~p~G~ 360 (361)
T 2oiz_A 329 VYDISQPEPKLLRTIEGAAEASLQVQFHPVGG 360 (361)
T ss_dssp EEECSSSSCEEEEEETTSCSSEEEEEECCCSC
T ss_pred EEECCCCcceeeEEeccCCCCcEEEEecCCCC
Confidence 2233344 32211112344689999999985
No 184
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=98.67 E-value=1.4e-05 Score=71.66 Aligned_cols=185 Identities=17% Similarity=0.126 Sum_probs=108.5
Q ss_pred ecCCCcCCCceEEEeeCCCeEEEEEcCCEEEEEEcCCCe----E-EEEeecCCccccceEEcC--CCCEEEEeCCCCeEE
Q 018705 46 LGEGCVNHPEDVSVVVSKGALYTATRDGWVKYFILHNET----L-VNWKHIDSQSLLGLTTTK--DGGVILCDNEKGLLK 118 (351)
Q Consensus 46 i~~~~~~~pe~i~~d~~~g~lyv~~~~g~I~~~d~~~g~----~-~~~~~~~~~p~~gl~~d~--~G~L~v~d~~~gl~~ 118 (351)
+..+.-..-.++++++++..+.++..+|.|..|+..++. . ..+........ .+++.+ +++++++....+.++
T Consensus 6 ~~~gH~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~v~-~~~~~~~~d~~~l~s~~~dg~v~ 84 (351)
T 3f3f_A 6 FDSGHDDLVHDVVYDFYGRHVATCSSDQHIKVFKLDKDTSNWELSDSWRAHDSSIV-AIDWASPEYGRIIASASYDKTVK 84 (351)
T ss_dssp EECCCSSCEEEEEECSSSSEEEEEETTSEEEEEEECSSSCCEEEEEEEECCSSCEE-EEEECCGGGCSEEEEEETTSCEE
T ss_pred cCcccccceeEEEEcCCCCEEEEeeCCCeEEEEECCCCCCcceecceeccCCCcEE-EEEEcCCCCCCEEEEEcCCCeEE
Confidence 334444456789999877788999999999999986552 2 22233334556 899987 577666555556555
Q ss_pred Ec--CCC-----------eEEecCCCCCcccEEEccC--CcEEEEeCCCccCCcccccccccccCCceEEEEeCCCCeEE
Q 018705 119 VT--EEG-----------VEAIVPDASFTNDVIAASD--GTLYFTVASTKYTPTDFYKDMAEGKPYGQLRKYDPKLKETT 183 (351)
Q Consensus 119 ~~--~~g-----------~~~l~~~~~~~n~l~~d~d--G~ly~t~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~~~~~ 183 (351)
+. ..+ ...+......+.++++.++ |.+.++.+. +|.|..||..+++..
T Consensus 85 vwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~-----------------dg~v~iwd~~~~~~~ 147 (351)
T 3f3f_A 85 LWEEDPDQEECSGRRWNKLCTLNDSKGSLYSVKFAPAHLGLKLACLGN-----------------DGILRLYDALEPSDL 147 (351)
T ss_dssp EEEECTTSCTTSSCSEEEEEEECCCSSCEEEEEECCGGGCSEEEEEET-----------------TCEEEEEECSSTTCT
T ss_pred EEecCCCcccccccCcceeeeecccCCceeEEEEcCCCCCcEEEEecC-----------------CCcEEEecCCChHHh
Confidence 54 222 2222222367888999998 876666543 467888886654321
Q ss_pred E-e-----e--------cCccccceEEEcCC---CCEEEEEecce--eEEeecCCCCceeEEec--cCCCCCCceEECCC
Q 018705 184 V-L-----H--------EGFYFANGIALSKN---EDFVVVCESWK--RYWLKGDRAGILDAFIE--NLPGGPDNINLAPD 242 (351)
Q Consensus 184 ~-~-----~--------~~~~~~ngi~~~~d---g~~lyv~~~~~--~~~i~~~~~~~~~~~~~--~~~g~pd~i~~d~~ 242 (351)
. + . ........++++|+ ++.+.++...+ .++... .+....... ...+....++++++
T Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~l~~~~~~~~~~~~~~~--~~~~~~~~~~~~h~~~i~~~~~~p~ 225 (351)
T 3f3f_A 148 RSWTLTSEMKVLSIPPANHLQSDFCLSWCPSRFSPEKLAVSALEQAIIYQRGK--DGKLHVAAKLPGHKSLIRSISWAPS 225 (351)
T ss_dssp TCCEEEEEEESCSCCCSSCSCCCEEEEECCCSSSCCEEEEEETTEEEEEEECT--TSCEEEEEECCCCCSCEEEEEECCC
T ss_pred ccccccccccccccccCCcccceeEEEeccCCCCCcEEEEecCCCcEEEEccC--CCceeeeeecCCCCcceeEEEECCC
Confidence 0 0 0 12234567889987 77777777666 333322 222221111 11222345678888
Q ss_pred C----CEEEEEe
Q 018705 243 G----SFWIGLI 250 (351)
Q Consensus 243 G----~lwva~~ 250 (351)
| ++.++..
T Consensus 226 ~~~~~~~l~s~~ 237 (351)
T 3f3f_A 226 IGRWYQLIATGC 237 (351)
T ss_dssp SSCSSEEEEEEE
T ss_pred CCCcceEEEEEc
Confidence 7 5555543
No 185
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=98.67 E-value=5.2e-06 Score=74.99 Aligned_cols=178 Identities=11% Similarity=0.042 Sum_probs=107.0
Q ss_pred CCCceEEEeeCCCeEEEEEcCCEEEEEEcCCCe----EEEEeecCCccccceEEcCCCC-EEE-EeCCCCeEEEcC-CC-
Q 018705 52 NHPEDVSVVVSKGALYTATRDGWVKYFILHNET----LVNWKHIDSQSLLGLTTTKDGG-VIL-CDNEKGLLKVTE-EG- 123 (351)
Q Consensus 52 ~~pe~i~~d~~~g~lyv~~~~g~I~~~d~~~g~----~~~~~~~~~~p~~gl~~d~~G~-L~v-~d~~~gl~~~~~-~g- 123 (351)
....+++++|++..++++..+|.|..|+..+++ ............ .++++++|+ +++ +...+.+..++. ..
T Consensus 12 ~~v~~~~~s~~~~~l~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~v~-~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~ 90 (342)
T 1yfq_A 12 DYISDIKIIPSKSLLLITSWDGSLTVYKFDIQAKNVDLLQSLRYKHPLL-CCNFIDNTDLQIYVGTVQGEILKVDLIGSP 90 (342)
T ss_dssp SCEEEEEEEGGGTEEEEEETTSEEEEEEEETTTTEEEEEEEEECSSCEE-EEEEEESSSEEEEEEETTSCEEEECSSSSS
T ss_pred CcEEEEEEcCCCCEEEEEcCCCeEEEEEeCCCCccccceeeeecCCceE-EEEECCCCCcEEEEEcCCCeEEEEEeccCC
Confidence 345689999877889999999999999876665 444444445566 899999998 444 444434444444 43
Q ss_pred -eEEecC--CCCCcccEEEccCCcEEEEeCCCccCCcccccccccccCCceEEEEeCCC---------CeEEEeecCccc
Q 018705 124 -VEAIVP--DASFTNDVIAASDGTLYFTVASTKYTPTDFYKDMAEGKPYGQLRKYDPKL---------KETTVLHEGFYF 191 (351)
Q Consensus 124 -~~~l~~--~~~~~n~l~~d~dG~ly~t~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~---------~~~~~~~~~~~~ 191 (351)
...+.. ....+.++++.+ +.++++.+. ++.|..||..+ ++..........
T Consensus 91 ~~~~~~~~~~~~~v~~l~~~~-~~~l~s~~~-----------------d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~ 152 (342)
T 1yfq_A 91 SFQALTNNEANLGICRICKYG-DDKLIAASW-----------------DGLIEVIDPRNYGDGVIAVKNLNSNNTKVKNK 152 (342)
T ss_dssp SEEECBSCCCCSCEEEEEEET-TTEEEEEET-----------------TSEEEEECHHHHTTBCEEEEESCSSSSSSCCC
T ss_pred ceEeccccCCCCceEEEEeCC-CCEEEEEcC-----------------CCeEEEEcccccccccccccCCeeeEEeeCCc
Confidence 555544 446788899999 766666543 46788887553 221111122234
Q ss_pred cceEEEcCCCCEEEEEecce--eEEe-ecCCCCceeEEeccCCCCCCceEECC-CCCEEEEEe
Q 018705 192 ANGIALSKNEDFVVVCESWK--RYWL-KGDRAGILDAFIENLPGGPDNINLAP-DGSFWIGLI 250 (351)
Q Consensus 192 ~ngi~~~~dg~~lyv~~~~~--~~~i-~~~~~~~~~~~~~~~~g~pd~i~~d~-~G~lwva~~ 250 (351)
...+++++++ ++++...+ ++|- .....................+.+++ +|++.++..
T Consensus 153 v~~~~~~~~~--l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~l~~~~ 213 (342)
T 1yfq_A 153 IFTMDTNSSR--LIVGMNNSQVQWFRLPLCEDDNGTIEESGLKYQIRDVALLPKEQEGYACSS 213 (342)
T ss_dssp EEEEEECSSE--EEEEESTTEEEEEESSCCTTCCCEEEECSCSSCEEEEEECSGGGCEEEEEE
T ss_pred eEEEEecCCc--EEEEeCCCeEEEEECCccccccceeeecCCCCceeEEEECCCCCCEEEEEe
Confidence 6678998887 66666555 3332 21011111112212233345678888 888666554
No 186
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=98.66 E-value=0.00012 Score=67.65 Aligned_cols=258 Identities=10% Similarity=0.079 Sum_probs=140.8
Q ss_pred CCCcCCCceEEEeeCCCeEEEEEcCCEEEEEEcCCCeEEE-EeecCCccccceEEcCCCCEEEEeCCCCeEEEcC--C--
Q 018705 48 EGCVNHPEDVSVVVSKGALYTATRDGWVKYFILHNETLVN-WKHIDSQSLLGLTTTKDGGVILCDNEKGLLKVTE--E-- 122 (351)
Q Consensus 48 ~~~~~~pe~i~~d~~~g~lyv~~~~g~I~~~d~~~g~~~~-~~~~~~~p~~gl~~d~~G~L~v~d~~~gl~~~~~--~-- 122 (351)
.+.-..-.++++.|++..+.++..||.|..||..+++... +........ .++++++|++.++....+.+++.. .
T Consensus 63 ~gH~~~V~~~~~sp~~~~l~s~s~D~~v~iWd~~~~~~~~~~~~h~~~v~-~~~~s~~g~~las~~~d~~v~iw~~~~~~ 141 (380)
T 3iz6_a 63 QGHSGKVYSLDWTPEKNWIVSASQDGRLIVWNALTSQKTHAIKLHCPWVM-ECAFAPNGQSVACGGLDSACSIFNLSSQA 141 (380)
T ss_dssp CCCSSCEEEEEECTTSSCEEEEETTSEEEEEETTTTEEEEEEECCCTTCC-CCEECTTSSEEEECCSSSCCEEEECCCCS
T ss_pred cccccEEEEEEEcCCCCEEEEEeCCCeEEEEECCCCccceEEecCCCCEE-EEEECCCCCEEEEeeCCCcEEEEECCCCc
Confidence 3433445689999877889999999999999987776533 333334456 899999998877765555554441 1
Q ss_pred ---C----eEEecCCCCCcccEEE-----------ccCCcEEEEeCCCc-----cC----Ccc--c----------cccc
Q 018705 123 ---G----VEAIVPDASFTNDVIA-----------ASDGTLYFTVASTK-----YT----PTD--F----------YKDM 163 (351)
Q Consensus 123 ---g----~~~l~~~~~~~n~l~~-----------d~dG~ly~t~~~~~-----~~----~~~--~----------~~~~ 163 (351)
+ .+.+......+..+.+ +.||.+.+=|.... +. ..+ . ...+
T Consensus 142 ~~~~~~~~~~~~~gh~~~v~~~~~~~~~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l 221 (380)
T 3iz6_a 142 DRDGNMPVSRVLTGHKGYASSCQYVPDQETRLITGSGDQTCVLWDVTTGQRISIFGSEFPSGHTADVLSLSINSLNANMF 221 (380)
T ss_dssp SCCCSSTTCCBCCCCSSCCCCCBCCSSSSSCEEEECTTSCEEEECTTTCCEEEEECCCSSSSCCSCEEEEEECSSSCCEE
T ss_pred cccCCccceeeccCCCcceEEEEEecCCCCEEEEECCCCcEEEEEcCCCcEEEEeecccCCCCccCeEEEEeecCCCCEE
Confidence 1 1111111112222222 23444333221100 00 000 0 0012
Q ss_pred ccccCCceEEEEeCCC-Ce-EEEeecCccccceEEEcCCCCEEEEEecce--eEEeecCCCCc-eeEEecc------CCC
Q 018705 164 AEGKPYGQLRKYDPKL-KE-TTVLHEGFYFANGIALSKNEDFVVVCESWK--RYWLKGDRAGI-LDAFIEN------LPG 232 (351)
Q Consensus 164 ~~~~~~g~l~~~d~~~-~~-~~~~~~~~~~~ngi~~~~dg~~lyv~~~~~--~~~i~~~~~~~-~~~~~~~------~~g 232 (351)
..+..++.|..||... ++ ...+.......+.++++|+++.+..+..++ ++|- ...++ ...+... ...
T Consensus 222 ~sgs~D~~v~~wd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~i~lwd--~~~~~~~~~~~~~~~~~~~~~~ 299 (380)
T 3iz6_a 222 ISGSCDTTVRLWDLRITSRAVRTYHGHEGDINSVKFFPDGQRFGTGSDDGTCRLFD--MRTGHQLQVYNREPDRNDNELP 299 (380)
T ss_dssp EEEETTSCEEEEETTTTCCCCEEECCCSSCCCEEEECTTSSEEEEECSSSCEEEEE--TTTTEEEEEECCCCSSSCCSSC
T ss_pred EEEECCCeEEEEECCCCCcceEEECCcCCCeEEEEEecCCCeEEEEcCCCeEEEEE--CCCCcEEEEecccccccccccC
Confidence 2344567788888652 22 233333344578899999999666666555 5552 22222 2222111 011
Q ss_pred CCCceEECCCCCEEEEEecCCchhhhhhhcChhHHHHHHhccchhhcccCCCCCCceEEEEEECCCCeEEEEEECCCCCc
Q 018705 233 GPDNINLAPDGSFWIGLIKMNQTGVRAIQKCREKWELLDAYPGLISLLLPMGSDAGARVVKVDGNDGKIIRDFNDPDATY 312 (351)
Q Consensus 233 ~pd~i~~d~~G~lwva~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~g~~~~~~~~~~g~~ 312 (351)
....++++++|++.++... .+.|..+|...++.+..+.......
T Consensus 300 ~v~~~~~s~~g~~l~~g~~------------------------------------dg~i~vwd~~~~~~~~~~~~~~~~h 343 (380)
T 3iz6_a 300 IVTSVAFSISGRLLFAGYS------------------------------------NGDCYVWDTLLAEMVLNLGTLQNSH 343 (380)
T ss_dssp SCSEEEECSSSSEEEEECT------------------------------------TSCEEEEETTTCCEEEEECCSCSSC
T ss_pred ceEEEEECCCCCEEEEEEC------------------------------------CCCEEEEECCCCceEEEEecccCCC
Confidence 2356789999987776533 2357777875677766663221122
Q ss_pred ccceeEEEEE-CCEEEEEecCCCeEEEEeCCCC
Q 018705 313 ISFVTSAAEF-DGNLYLASLQSNFIGILPLDGP 344 (351)
Q Consensus 313 ~~~~~~~~~~-~g~L~ig~~~~~~i~~~~~~~~ 344 (351)
...++++... +|.+.++....+.|..+++.+.
T Consensus 344 ~~~v~~l~~s~dg~~l~sgs~D~~i~iW~~~~~ 376 (380)
T 3iz6_a 344 EGRISCLGLSSDGSALCTGSWDKNLKIWAFSGH 376 (380)
T ss_dssp CCCCCEEEECSSSSEEEEECTTSCEEEEECCSS
T ss_pred CCceEEEEECCCCCEEEEeeCCCCEEEEecCCC
Confidence 3457777764 3444444444667888887654
No 187
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=98.65 E-value=2.2e-05 Score=74.48 Aligned_cols=143 Identities=11% Similarity=0.101 Sum_probs=92.3
Q ss_pred CCceEEEeeCCCeE-EEEEcCCEEEEEEcC--CCeE-EEEe--ecCCccccceEEcCCCCEE-EEeCCCCeEEEc-CCC-
Q 018705 53 HPEDVSVVVSKGAL-YTATRDGWVKYFILH--NETL-VNWK--HIDSQSLLGLTTTKDGGVI-LCDNEKGLLKVT-EEG- 123 (351)
Q Consensus 53 ~pe~i~~d~~~g~l-yv~~~~g~I~~~d~~--~g~~-~~~~--~~~~~p~~gl~~d~~G~L~-v~d~~~gl~~~~-~~g- 123 (351)
...+++++|++..| +++..+|.|..|+.. +++. ..+. .....+. .++++++|+.+ +++....++.++ .++
T Consensus 104 ~v~~~~~s~d~~~l~~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~-~~~~sp~~~~l~~~~~~g~v~~~~~~~~~ 182 (450)
T 2vdu_B 104 YIRNLRLTSDESRLIACADSDKSLLVFDVDKTSKNVLKLRKRFCFSKRPN-AISIAEDDTTVIIADKFGDVYSIDINSIP 182 (450)
T ss_dssp CEEEEEECTTSSEEEEEEGGGTEEEEEEECSSSSSCEEEEEEEECSSCEE-EEEECTTSSEEEEEETTSEEEEEETTSCC
T ss_pred ceEEEEEcCCCCEEEEEECCCCeEEEEECcCCCCceeeeeecccCCCCce-EEEEcCCCCEEEEEeCCCcEEEEecCCcc
Confidence 35689999777775 567789999999986 5543 3332 2335567 99999999654 455444455554 233
Q ss_pred -eE----EecCCCCCcccEEEccC---CcEEEEeCCCccCCcccccccccccCCceEEEEeCCCCeEE-Eee-cCccccc
Q 018705 124 -VE----AIVPDASFTNDVIAASD---GTLYFTVASTKYTPTDFYKDMAEGKPYGQLRKYDPKLKETT-VLH-EGFYFAN 193 (351)
Q Consensus 124 -~~----~l~~~~~~~n~l~~d~d---G~ly~t~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~~~~~-~~~-~~~~~~n 193 (351)
.. .+......+++++++++ |.++++.+. ++.|..||..+++.. .+. .......
T Consensus 183 ~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~-----------------d~~i~vwd~~~~~~~~~~~~~h~~~v~ 245 (450)
T 2vdu_B 183 EEKFTQEPILGHVSMLTDVHLIKDSDGHQFIITSDR-----------------DEHIKISHYPQCFIVDKWLFGHKHFVS 245 (450)
T ss_dssp CSSCCCCCSEECSSCEEEEEEEECTTSCEEEEEEET-----------------TSCEEEEEESCTTCEEEECCCCSSCEE
T ss_pred cccccceeeecccCceEEEEEcCCCCCCcEEEEEcC-----------------CCcEEEEECCCCceeeeeecCCCCceE
Confidence 21 22222257889999999 876666543 457888887665533 222 2334568
Q ss_pred eEEEcCCCCEEEEEecce--eEE
Q 018705 194 GIALSKNEDFVVVCESWK--RYW 214 (351)
Q Consensus 194 gi~~~~dg~~lyv~~~~~--~~~ 214 (351)
.++++ +++.|+.+..++ ++|
T Consensus 246 ~~~~s-d~~~l~s~~~d~~v~vw 267 (450)
T 2vdu_B 246 SICCG-KDYLLLSAGGDDKIFAW 267 (450)
T ss_dssp EEEEC-STTEEEEEESSSEEEEE
T ss_pred EEEEC-CCCEEEEEeCCCeEEEE
Confidence 89999 999777776655 444
No 188
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=98.65 E-value=2.4e-06 Score=84.00 Aligned_cols=179 Identities=12% Similarity=0.015 Sum_probs=106.1
Q ss_pred CCceEEEeeCCCeEEEEEc---CC--EEEEEEc--CCCeEEEEeecCCccccceEEcCCC--CEEEEeCCCCeEEEcC-C
Q 018705 53 HPEDVSVVVSKGALYTATR---DG--WVKYFIL--HNETLVNWKHIDSQSLLGLTTTKDG--GVILCDNEKGLLKVTE-E 122 (351)
Q Consensus 53 ~pe~i~~d~~~g~lyv~~~---~g--~I~~~d~--~~g~~~~~~~~~~~p~~gl~~d~~G--~L~v~d~~~gl~~~~~-~ 122 (351)
...+++|+|+ ..+|++.. +. +|+.++. .++.. .+... .... ..++.++| .+|++....++..++. +
T Consensus 66 ~~~~~~~spd-~~l~~~~~~~g~~~~~l~~~~~~~~g~~~-~l~~~-~~~~-~~~~s~dg~~~~~~s~~~~~~~l~d~~~ 141 (582)
T 3o4h_A 66 SVLDPHYGVG-RVILVRDVSKGAEQHALFKVNTSRPGEEQ-RLEAV-KPMR-ILSGVDTGEAVVFTGATEDRVALYALDG 141 (582)
T ss_dssp EECEECTTCS-EEEEEEECSTTSCCEEEEEEETTSTTCCE-ECTTS-CSBE-EEEEEECSSCEEEEEECSSCEEEEEEET
T ss_pred ccccccCCCC-eEEEEeccCCCCcceEEEEEeccCCCccc-cccCC-CCce-eeeeCCCCCeEEEEecCCCCceEEEccC
Confidence 3457788865 67777664 22 6777876 43333 32221 1122 33444444 5677666666665553 5
Q ss_pred C-eEEecCCCCCcccEEEccCCcEEEEeCCCccCCcccccccccccCCceEEEEeCCCCeEEEeecCccccceEEEcCCC
Q 018705 123 G-VEAIVPDASFTNDVIAASDGTLYFTVASTKYTPTDFYKDMAEGKPYGQLRKYDPKLKETTVLHEGFYFANGIALSKNE 201 (351)
Q Consensus 123 g-~~~l~~~~~~~n~l~~d~dG~ly~t~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~~~~~~~~~~~~~~ngi~~~~dg 201 (351)
| .+.+..... ++++++|||+.+++.+... .....|+++|.++++.+.+.......+.+++||||
T Consensus 142 g~~~~l~~~~~--~~~~~spDG~~la~~~~~~-------------~~~~~i~~~d~~~g~~~~l~~~~~~~~~~~~SpDG 206 (582)
T 3o4h_A 142 GGLRELARLPG--FGFVSDIRGDLIAGLGFFG-------------GGRVSLFTSNLSSGGLRVFDSGEGSFSSASISPGM 206 (582)
T ss_dssp TEEEEEEEESS--CEEEEEEETTEEEEEEEEE-------------TTEEEEEEEETTTCCCEEECCSSCEEEEEEECTTS
T ss_pred CcEEEeecCCC--ceEEECCCCCEEEEEEEcC-------------CCCeEEEEEcCCCCCceEeecCCCccccceECCCC
Confidence 6 555543312 8899999997555332200 01246999998888887766554556889999999
Q ss_pred CEEEEEecce--eEEeecCCCCceeEEeccCCCCCCceE--------ECCCCCEEEEEec
Q 018705 202 DFVVVCESWK--RYWLKGDRAGILDAFIENLPGGPDNIN--------LAPDGSFWIGLIK 251 (351)
Q Consensus 202 ~~lyv~~~~~--~~~i~~~~~~~~~~~~~~~~g~pd~i~--------~d~~G~lwva~~~ 251 (351)
+.|+.++..+ .+++-+...++.. ........+.+++ +++||.++++...
T Consensus 207 ~~l~~~~~~~~~~i~~~d~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~spdg~~~~~~~~ 265 (582)
T 3o4h_A 207 KVTAGLETAREARLVTVDPRDGSVE-DLELPSKDFSSYRPTAITWLGYLPDGRLAVVARR 265 (582)
T ss_dssp CEEEEEECSSCEEEEEECTTTCCEE-ECCCSCSHHHHHCCSEEEEEEECTTSCEEEEEEE
T ss_pred CEEEEccCCCeeEEEEEcCCCCcEE-EccCCCcChhhhhhccccceeEcCCCcEEEEEEc
Confidence 9888666555 5555544444444 2222222233456 9999988777654
No 189
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=98.64 E-value=2e-05 Score=71.86 Aligned_cols=177 Identities=12% Similarity=0.099 Sum_probs=108.3
Q ss_pred CCCceEEEeeCCCeEEEEEcCCEEEEEEcCCCeE-EEEeecCCccccceEEcCCCCEEEEeCCCCeEEEcC-CC--eEEe
Q 018705 52 NHPEDVSVVVSKGALYTATRDGWVKYFILHNETL-VNWKHIDSQSLLGLTTTKDGGVILCDNEKGLLKVTE-EG--VEAI 127 (351)
Q Consensus 52 ~~pe~i~~d~~~g~lyv~~~~g~I~~~d~~~g~~-~~~~~~~~~p~~gl~~d~~G~L~v~d~~~gl~~~~~-~g--~~~l 127 (351)
..-.++++++++..+.++..|+.|..||..+++. ..+........ .++++++|+.+++....+.++++. .+ ....
T Consensus 77 ~~V~~~~~~~~~~~l~s~s~D~~v~lwd~~~~~~~~~~~~h~~~v~-~v~~sp~~~~l~s~~~d~~i~~wd~~~~~~~~~ 155 (343)
T 2xzm_R 77 HFVSDLALSQENCFAISSSWDKTLRLWDLRTGTTYKRFVGHQSEVY-SVAFSPDNRQILSAGAEREIKLWNILGECKFSS 155 (343)
T ss_dssp SCEEEEEECSSTTEEEEEETTSEEEEEETTSSCEEEEEECCCSCEE-EEEECSSTTEEEEEETTSCEEEEESSSCEEEEC
T ss_pred CceEEEEECCCCCEEEEEcCCCcEEEEECCCCcEEEEEcCCCCcEE-EEEECCCCCEEEEEcCCCEEEEEeccCCceeee
Confidence 3446889997777888899999999999877765 34444445566 899999998766655566666663 34 3222
Q ss_pred cC---CCCCcccEEEccCC----------cEEEEeCCCccCCcccccccccccCCceEEEEeCCCCeEEEeecCccccce
Q 018705 128 VP---DASFTNDVIAASDG----------TLYFTVASTKYTPTDFYKDMAEGKPYGQLRKYDPKLKETTVLHEGFYFANG 194 (351)
Q Consensus 128 ~~---~~~~~n~l~~d~dG----------~ly~t~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~~~~~~~~~~~~~~ng 194 (351)
.. ....+..+++++++ .++++.+ .++.|..||........+.......+.
T Consensus 156 ~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~l~s~~-----------------~d~~i~iwd~~~~~~~~~~~h~~~v~~ 218 (343)
T 2xzm_R 156 AEKENHSDWVSCVRYSPIMKSANKVQPFAPYFASVG-----------------WDGRLKVWNTNFQIRYTFKAHESNVNH 218 (343)
T ss_dssp CTTTSCSSCEEEEEECCCCCSCSCCCSSCCEEEEEE-----------------TTSEEEEEETTTEEEEEEECCSSCEEE
T ss_pred ecccCCCceeeeeeeccccccccccCCCCCEEEEEc-----------------CCCEEEEEcCCCceeEEEcCccccceE
Confidence 21 11456777887775 3333332 357889999653323333333445678
Q ss_pred EEEcCCCCEEEEEecce--eEEeecCCCCceeEEeccCCCCCCceEECCCCCEEEE
Q 018705 195 IALSKNEDFVVVCESWK--RYWLKGDRAGILDAFIENLPGGPDNINLAPDGSFWIG 248 (351)
Q Consensus 195 i~~~~dg~~lyv~~~~~--~~~i~~~~~~~~~~~~~~~~g~pd~i~~d~~G~lwva 248 (351)
++++|+|+.|..+..++ ++|-..........+. .......++++++|.+..+
T Consensus 219 ~~~s~~g~~l~sgs~dg~v~iwd~~~~~~~~~~~~--~~~~v~~v~~sp~~~~la~ 272 (343)
T 2xzm_R 219 LSISPNGKYIATGGKDKKLLIWDILNLTYPQREFD--AGSTINQIAFNPKLQWVAV 272 (343)
T ss_dssp EEECTTSSEEEEEETTCEEEEEESSCCSSCSEEEE--CSSCEEEEEECSSSCEEEE
T ss_pred EEECCCCCEEEEEcCCCeEEEEECCCCcccceeec--CCCcEEEEEECCCCCEEEE
Confidence 99999999777766666 5552211111112221 1122456788888875544
No 190
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=98.64 E-value=7.1e-05 Score=70.81 Aligned_cols=170 Identities=10% Similarity=0.003 Sum_probs=97.2
Q ss_pred eEEEeeCCCeEEEEEcCCEEEEEEcCCCeEEE-EeecCCccccceEEcCCCCEEEEeCCCCeEEEc--CCC--eEEecCC
Q 018705 56 DVSVVVSKGALYTATRDGWVKYFILHNETLVN-WKHIDSQSLLGLTTTKDGGVILCDNEKGLLKVT--EEG--VEAIVPD 130 (351)
Q Consensus 56 ~i~~d~~~g~lyv~~~~g~I~~~d~~~g~~~~-~~~~~~~p~~gl~~d~~G~L~v~d~~~gl~~~~--~~g--~~~l~~~ 130 (351)
++.++ ++.++++..||.|..||..+++... +........ .+++.+++.|..+.. .+.+++. .++ ...+...
T Consensus 127 ~~~~~--~~~l~sgs~dg~i~vwd~~~~~~~~~~~~h~~~V~-~l~~~~~~~l~s~s~-dg~i~vwd~~~~~~~~~~~~h 202 (464)
T 3v7d_B 127 CLQFE--DNYVITGADDKMIRVYDSINKKFLLQLSGHDGGVW-ALKYAHGGILVSGST-DRTVRVWDIKKGCCTHVFEGH 202 (464)
T ss_dssp EEEEE--TTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEE-EEEECSTTEEEEEET-TSCEEEEETTTTEEEEEECCC
T ss_pred EEEEC--CCEEEEEcCCCcEEEEECCCCcEEEEEeCCCcCEE-EEEEcCCCEEEEEeC-CCCEEEEECCCCcEEEEECCC
Confidence 55554 6789999999999999988887543 333334456 899988885555554 4555555 355 4455433
Q ss_pred CCCcccEEEc--cCCcEEEEeCCCccCCcccccccccccCCceEEEEeCCCCeEEE-----------------------e
Q 018705 131 ASFTNDVIAA--SDGTLYFTVASTKYTPTDFYKDMAEGKPYGQLRKYDPKLKETTV-----------------------L 185 (351)
Q Consensus 131 ~~~~n~l~~d--~dG~ly~t~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~~~~~~-----------------------~ 185 (351)
...+..+++. +++.+.++.+. ++.|..||..+++... .
T Consensus 203 ~~~v~~l~~~~~~~~~~l~s~s~-----------------d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 265 (464)
T 3v7d_B 203 NSTVRCLDIVEYKNIKYIVTGSR-----------------DNTLHVWKLPKESSVPDHGEEHDYPLVFHTPEENPYFVGV 265 (464)
T ss_dssp SSCEEEEEEEESSSCEEEEEEET-----------------TSCEEEEECCCCCCC------CCSSEEESCGGGCTTEEEE
T ss_pred CCccEEEEEecCCCCCEEEEEcC-----------------CCcEEEeeCCCCcccccccccCCcceEeeccCCCeEEEEE
Confidence 3567777777 46665555543 3566666655433110 0
Q ss_pred ecCccccceEEEcCCCCEEEEEecce--eEEeecCCCCce-eEEeccCCCCCCceEECCCCCEEEEEe
Q 018705 186 HEGFYFANGIALSKNEDFVVVCESWK--RYWLKGDRAGIL-DAFIENLPGGPDNINLAPDGSFWIGLI 250 (351)
Q Consensus 186 ~~~~~~~ngi~~~~dg~~lyv~~~~~--~~~i~~~~~~~~-~~~~~~~~g~pd~i~~d~~G~lwva~~ 250 (351)
.. .....-.+++++++.++.+..++ ++| +...++. ..+. ...+....++++++|++.++..
T Consensus 266 ~~-~~~~~v~~~~~~~~~l~~~~~d~~i~vw--d~~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~sg~ 329 (464)
T 3v7d_B 266 LR-GHMASVRTVSGHGNIVVSGSYDNTLIVW--DVAQMKCLYILS-GHTDRIYSTIYDHERKRCISAS 329 (464)
T ss_dssp EC-CCSSCEEEEEEETTEEEEEETTSCEEEE--ETTTTEEEEEEC-CCSSCEEEEEEETTTTEEEEEE
T ss_pred cc-CccceEEEEcCCCCEEEEEeCCCeEEEE--ECCCCcEEEEec-CCCCCEEEEEEcCCCCEEEEEe
Confidence 11 11122235677888777777666 444 2222222 2222 2222234567888888666554
No 191
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=98.63 E-value=0.00014 Score=66.99 Aligned_cols=188 Identities=12% Similarity=0.088 Sum_probs=113.2
Q ss_pred ceEEcCCCCE-EEEeC-CCCeEEEc--CCC--eEEecCCCCCcccEEEccCCcEEEEeCCCccCCcccccccccccCCce
Q 018705 98 GLTTTKDGGV-ILCDN-EKGLLKVT--EEG--VEAIVPDASFTNDVIAASDGTLYFTVASTKYTPTDFYKDMAEGKPYGQ 171 (351)
Q Consensus 98 gl~~d~~G~L-~v~d~-~~gl~~~~--~~g--~~~l~~~~~~~n~l~~d~dG~ly~t~~~~~~~~~~~~~~~~~~~~~g~ 171 (351)
.++|.+||++ .++.. ..+.++++ +++ +..+... ..+++++++|||.+.++.+. +.
T Consensus 138 ~v~fSpDg~~la~as~~~d~~i~iwd~~~~~~~~~~~~~-~~V~~v~fspdg~~l~s~s~------------------~~ 198 (365)
T 4h5i_A 138 LVYISREGTVAAIASSKVPAIMRIIDPSDLTEKFEIETR-GEVKDLHFSTDGKVVAYITG------------------SS 198 (365)
T ss_dssp EEEECTTSSCEEEEESCSSCEEEEEETTTTEEEEEEECS-SCCCEEEECTTSSEEEEECS------------------SC
T ss_pred EEEEcCCCCEEEEEECCCCCEEEEeECCCCcEEEEeCCC-CceEEEEEccCCceEEeccc------------------ee
Confidence 6899999975 45543 35777777 355 3333322 56899999999988776643 35
Q ss_pred EEEEeCCCCeEEEeec---CccccceEEEcCCCCEEEEEecce----eEEeecCCCCcee-----EEeccCCCCCCceEE
Q 018705 172 LRKYDPKLKETTVLHE---GFYFANGIALSKNEDFVVVCESWK----RYWLKGDRAGILD-----AFIENLPGGPDNINL 239 (351)
Q Consensus 172 l~~~d~~~~~~~~~~~---~~~~~ngi~~~~dg~~lyv~~~~~----~~~i~~~~~~~~~-----~~~~~~~g~pd~i~~ 239 (351)
+.+|+..+++...... .-.....++++||++.+..+...+ .++.-+....... .+. ........+++
T Consensus 199 ~~~~~~~~~~~~~~~~~~~~~~~v~~v~fspdg~~l~~~s~d~~~~~~i~~~~~~~~~~~~~~~~~~~-~~~~~V~~~~~ 277 (365)
T 4h5i_A 199 LEVISTVTGSCIARKTDFDKNWSLSKINFIADDTVLIAASLKKGKGIVLTKISIKSGNTSVLRSKQVT-NRFKGITSMDV 277 (365)
T ss_dssp EEEEETTTCCEEEEECCCCTTEEEEEEEEEETTEEEEEEEESSSCCEEEEEEEEETTEEEEEEEEEEE-SSCSCEEEEEE
T ss_pred EEEEEeccCcceeeeecCCCCCCEEEEEEcCCCCEEEEEecCCcceeEEeecccccceecceeeeeec-CCCCCeEeEEE
Confidence 6666655554432211 123356799999998666655443 2222211111111 111 11122345689
Q ss_pred CCCCCEEEEEecCCchhhhhhhcChhHHHHHHhccchhhcccCCCCCCceEEEEEECCCCeEEEEEE-CCCCCcccceeE
Q 018705 240 APDGSFWIGLIKMNQTGVRAIQKCREKWELLDAYPGLISLLLPMGSDAGARVVKVDGNDGKIIRDFN-DPDATYISFVTS 318 (351)
Q Consensus 240 d~~G~lwva~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~g~~~~~~~-~~~g~~~~~~~~ 318 (351)
+++|++.++... .+.|..+|.++++.+..+. .+. ..+++
T Consensus 278 Spdg~~lasgs~------------------------------------D~~V~iwd~~~~~~~~~~~~gH~----~~V~~ 317 (365)
T 4h5i_A 278 DMKGELAVLASN------------------------------------DNSIALVKLKDLSMSKIFKQAHS----FAITE 317 (365)
T ss_dssp CTTSCEEEEEET------------------------------------TSCEEEEETTTTEEEEEETTSSS----SCEEE
T ss_pred CCCCCceEEEcC------------------------------------CCEEEEEECCCCcEEEEecCccc----CCEEE
Confidence 999987766443 1347778876788887763 333 35788
Q ss_pred EEEE-CCEEEEEecCCCeEEEEeCCCCC
Q 018705 319 AAEF-DGNLYLASLQSNFIGILPLDGPE 345 (351)
Q Consensus 319 ~~~~-~g~L~ig~~~~~~i~~~~~~~~~ 345 (351)
+.+. +|++.++....+.|.++++|..-
T Consensus 318 v~fSpdg~~laS~S~D~tvrvw~ip~~~ 345 (365)
T 4h5i_A 318 VTISPDSTYVASVSAANTIHIIKLPLNY 345 (365)
T ss_dssp EEECTTSCEEEEEETTSEEEEEECCTTT
T ss_pred EEECCCCCEEEEEeCCCeEEEEEcCCCC
Confidence 8876 45655555557889999987653
No 192
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=98.62 E-value=1.7e-05 Score=78.57 Aligned_cols=182 Identities=11% Similarity=0.061 Sum_probs=112.3
Q ss_pred cCCCceEEEeeCCCeEEEEEcCCEEEEEEcCCCeE-EEEeecCCccccceEEcCCCCEEEEeCCCCeEEEcC--CC----
Q 018705 51 VNHPEDVSVVVSKGALYTATRDGWVKYFILHNETL-VNWKHIDSQSLLGLTTTKDGGVILCDNEKGLLKVTE--EG---- 123 (351)
Q Consensus 51 ~~~pe~i~~d~~~g~lyv~~~~g~I~~~d~~~g~~-~~~~~~~~~p~~gl~~d~~G~L~v~d~~~gl~~~~~--~g---- 123 (351)
...+.+++++|+++.+.++. ++.|..++..+++. ..+........ .++++++|++.++....+.++++. ++
T Consensus 18 ~g~~~~~~~spdg~~l~~~~-~~~v~l~~~~~~~~~~~~~~h~~~v~-~~~~spdg~~lasg~~d~~v~lWd~~~~~~~~ 95 (611)
T 1nr0_A 18 RGTAVVLGNTPAGDKIQYCN-GTSVYTVPVGSLTDTEIYTEHSHQTT-VAKTSPSGYYCASGDVHGNVRIWDTTQTTHIL 95 (611)
T ss_dssp TTCCCCCEECTTSSEEEEEE-TTEEEEEETTCSSCCEEECCCSSCEE-EEEECTTSSEEEEEETTSEEEEEESSSTTCCE
T ss_pred cCceeEEeeCCCCCEEEeCC-CCEEEEecCCCcccCeEecCCCCceE-EEEECCCCcEEEEEeCCCCEEEeECCCCccee
Confidence 34678999998777777766 56899999866644 34444445566 899999999887766677777763 33
Q ss_pred eEEecCCCCCcccEEEccCCcEEEEeCCCccCCcccccccccccCCceEEEEeCCCCeEEEeecCccccceEEEcCCCCE
Q 018705 124 VEAIVPDASFTNDVIAASDGTLYFTVASTKYTPTDFYKDMAEGKPYGQLRKYDPKLKETTVLHEGFYFANGIALSKNEDF 203 (351)
Q Consensus 124 ~~~l~~~~~~~n~l~~d~dG~ly~t~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~~~~~~~~~~~~~~ngi~~~~dg~~ 203 (351)
...+......+++++++|||...++.+..+ ...+.++.||.. .....+.......+.++|+|++..
T Consensus 96 ~~~~~~~~~~v~~v~fs~dg~~l~~~~~~~-------------~~~~~v~~wd~~-~~~~~l~gh~~~v~~v~f~p~~~~ 161 (611)
T 1nr0_A 96 KTTIPVFSGPVKDISWDSESKRIAAVGEGR-------------ERFGHVFLFDTG-TSNGNLTGQARAMNSVDFKPSRPF 161 (611)
T ss_dssp EEEEECSSSCEEEEEECTTSCEEEEEECCS-------------SCSEEEEETTTC-CBCBCCCCCSSCEEEEEECSSSSC
T ss_pred eEeecccCCceEEEEECCCCCEEEEEECCC-------------CceeEEEEeeCC-CCcceecCCCCCceEEEECCCCCe
Confidence 223333336789999999997666554211 012467777743 222222233345678999999873
Q ss_pred -EEEEecce--eEEeecCCCCce-eEEeccCCCCCCceEECCCCCEEEEEec
Q 018705 204 -VVVCESWK--RYWLKGDRAGIL-DAFIENLPGGPDNINLAPDGSFWIGLIK 251 (351)
Q Consensus 204 -lyv~~~~~--~~~i~~~~~~~~-~~~~~~~~g~pd~i~~d~~G~lwva~~~ 251 (351)
|..+..++ ++|-. ..++. ..+. ...+....++++++|++.++...
T Consensus 162 ~l~s~s~D~~v~lwd~--~~~~~~~~l~-~H~~~V~~v~fspdg~~las~s~ 210 (611)
T 1nr0_A 162 RIISGSDDNTVAIFEG--PPFKFKSTFG-EHTKFVHSVRYNPDGSLFASTGG 210 (611)
T ss_dssp EEEEEETTSCEEEEET--TTBEEEEEEC-CCSSCEEEEEECTTSSEEEEEET
T ss_pred EEEEEeCCCeEEEEEC--CCCeEeeeec-cccCceEEEEECCCCCEEEEEEC
Confidence 55555555 66632 22222 2222 22233456789999997776543
No 193
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=98.62 E-value=2.9e-05 Score=73.62 Aligned_cols=135 Identities=13% Similarity=0.107 Sum_probs=80.6
Q ss_pred cccceEEcCCCCEE-EEeCCCCeEEEc--C--CC--eEEecC--CCCCcccEEEccCCcEEEEeCCCccCCccccccccc
Q 018705 95 SLLGLTTTKDGGVI-LCDNEKGLLKVT--E--EG--VEAIVP--DASFTNDVIAASDGTLYFTVASTKYTPTDFYKDMAE 165 (351)
Q Consensus 95 p~~gl~~d~~G~L~-v~d~~~gl~~~~--~--~g--~~~l~~--~~~~~n~l~~d~dG~ly~t~~~~~~~~~~~~~~~~~ 165 (351)
.. +++++++|+.+ ++....+.++++ . ++ .+.+.. ....+++++++++|...++.+.
T Consensus 105 v~-~~~~s~d~~~l~~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~-------------- 169 (450)
T 2vdu_B 105 IR-NLRLTSDESRLIACADSDKSLLVFDVDKTSKNVLKLRKRFCFSKRPNAISIAEDDTTVIIADK-------------- 169 (450)
T ss_dssp EE-EEEECTTSSEEEEEEGGGTEEEEEEECSSSSSCEEEEEEEECSSCEEEEEECTTSSEEEEEET--------------
T ss_pred eE-EEEEcCCCCEEEEEECCCCeEEEEECcCCCCceeeeeecccCCCCceEEEEcCCCCEEEEEeC--------------
Confidence 45 89999999864 555445555554 3 44 444431 1256889999999975555432
Q ss_pred ccCCceEEEEeCCCCeEE-----EeecCccccceEEEcCC---CCEEEEEecce--eEEeecCCCCc-eeEEeccCCCCC
Q 018705 166 GKPYGQLRKYDPKLKETT-----VLHEGFYFANGIALSKN---EDFVVVCESWK--RYWLKGDRAGI-LDAFIENLPGGP 234 (351)
Q Consensus 166 ~~~~g~l~~~d~~~~~~~-----~~~~~~~~~ngi~~~~d---g~~lyv~~~~~--~~~i~~~~~~~-~~~~~~~~~g~p 234 (351)
.|.++.|+..+++.. .+.........++++|+ ++.|+.+..++ ++|-.. .+. ...+.....+..
T Consensus 170 ---~g~v~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~d~~i~vwd~~--~~~~~~~~~~~h~~~v 244 (450)
T 2vdu_B 170 ---FGDVYSIDINSIPEEKFTQEPILGHVSMLTDVHLIKDSDGHQFIITSDRDEHIKISHYP--QCFIVDKWLFGHKHFV 244 (450)
T ss_dssp ---TSEEEEEETTSCCCSSCCCCCSEECSSCEEEEEEEECTTSCEEEEEEETTSCEEEEEES--CTTCEEEECCCCSSCE
T ss_pred ---CCcEEEEecCCcccccccceeeecccCceEEEEEcCCCCCCcEEEEEcCCCcEEEEECC--CCceeeeeecCCCCce
Confidence 467888886654432 12222345678999999 87676676665 555321 122 222222233345
Q ss_pred CceEECCCCCEEEEEe
Q 018705 235 DNINLAPDGSFWIGLI 250 (351)
Q Consensus 235 d~i~~d~~G~lwva~~ 250 (351)
..++++ +|++.++..
T Consensus 245 ~~~~~s-d~~~l~s~~ 259 (450)
T 2vdu_B 245 SSICCG-KDYLLLSAG 259 (450)
T ss_dssp EEEEEC-STTEEEEEE
T ss_pred EEEEEC-CCCEEEEEe
Confidence 667888 888766654
No 194
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=98.61 E-value=1.3e-05 Score=73.66 Aligned_cols=176 Identities=16% Similarity=0.185 Sum_probs=113.5
Q ss_pred CceEEEeeCCCeEEEEEcCCEEEEEEcCCCeEE-EEeecCCccccceEEcC--CCCEEEEeCCCCeEEEc--CCC--eEE
Q 018705 54 PEDVSVVVSKGALYTATRDGWVKYFILHNETLV-NWKHIDSQSLLGLTTTK--DGGVILCDNEKGLLKVT--EEG--VEA 126 (351)
Q Consensus 54 pe~i~~d~~~g~lyv~~~~g~I~~~d~~~g~~~-~~~~~~~~p~~gl~~d~--~G~L~v~d~~~gl~~~~--~~g--~~~ 126 (351)
-.++++.+++..+.++..|+.|..||..+++.. .+........ .+.+.+ +|+++++....+.++++ .++ ...
T Consensus 157 v~~~~~~~~~~~l~t~s~D~~v~lwd~~~~~~~~~~~~h~~~v~-~~~~~~~~~g~~l~sgs~Dg~v~~wd~~~~~~~~~ 235 (354)
T 2pbi_B 157 LSACSFTNSDMQILTASGDGTCALWDVESGQLLQSFHGHGADVL-CLDLAPSETGNTFVSGGCDKKAMVWDMRSGQCVQA 235 (354)
T ss_dssp EEEEEECSSSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEE-EEEECCCSSCCEEEEEETTSCEEEEETTTCCEEEE
T ss_pred EEEEEEeCCCCEEEEEeCCCcEEEEeCCCCeEEEEEcCCCCCeE-EEEEEeCCCCCEEEEEeCCCeEEEEECCCCcEEEE
Confidence 357888877778999999999999998887653 3433334445 677764 56666655455555555 355 555
Q ss_pred ecCCCCCcccEEEccCCcEEEEeCCCccCCcccccccccccCCceEEEEeCCCCeEEEeecC---ccccceEEEcCCCCE
Q 018705 127 IVPDASFTNDVIAASDGTLYFTVASTKYTPTDFYKDMAEGKPYGQLRKYDPKLKETTVLHEG---FYFANGIALSKNEDF 203 (351)
Q Consensus 127 l~~~~~~~n~l~~d~dG~ly~t~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~~~~~~~~~~---~~~~ngi~~~~dg~~ 203 (351)
+......+++++++|+|..+++.+. ++.|..||..+++....... ......++++++++.
T Consensus 236 ~~~h~~~v~~v~~~p~~~~l~s~s~-----------------D~~v~lwd~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~ 298 (354)
T 2pbi_B 236 FETHESDVNSVRYYPSGDAFASGSD-----------------DATCRLYDLRADREVAIYSKESIIFGASSVDFSLSGRL 298 (354)
T ss_dssp ECCCSSCEEEEEECTTSSEEEEEET-----------------TSCEEEEETTTTEEEEEECCTTCCSCEEEEEECTTSSE
T ss_pred ecCCCCCeEEEEEeCCCCEEEEEeC-----------------CCeEEEEECCCCcEEEEEcCCCcccceeEEEEeCCCCE
Confidence 5444467899999999988777654 46788888776644332221 123567899999997
Q ss_pred EEEEecce--eEEeecCCCCc-eeEEeccCCCCCCceEECCCCCEEEEEe
Q 018705 204 VVVCESWK--RYWLKGDRAGI-LDAFIENLPGGPDNINLAPDGSFWIGLI 250 (351)
Q Consensus 204 lyv~~~~~--~~~i~~~~~~~-~~~~~~~~~g~pd~i~~d~~G~lwva~~ 250 (351)
|..+..++ ++|-. ..++ ...+. ...+....++++++|++.++..
T Consensus 299 l~~g~~d~~i~vwd~--~~~~~~~~l~-~h~~~v~~l~~spdg~~l~sgs 345 (354)
T 2pbi_B 299 LFAGYNDYTINVWDV--LKGSRVSILF-GHENRVSTLRVSPDGTAFCSGS 345 (354)
T ss_dssp EEEEETTSCEEEEET--TTCSEEEEEC-CCSSCEEEEEECTTSSCEEEEE
T ss_pred EEEEECCCcEEEEEC--CCCceEEEEE-CCCCcEEEEEECCCCCEEEEEc
Confidence 77776665 55522 1222 22222 2223345678999998776654
No 195
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=98.60 E-value=2e-05 Score=71.45 Aligned_cols=153 Identities=12% Similarity=0.122 Sum_probs=101.1
Q ss_pred eEecCCCcCCCceEEEeeC----CCeEEEEEcCCEEEEEEcCCCeE-EEEee-----cCCccccceEEcCC----CCEEE
Q 018705 44 TKLGEGCVNHPEDVSVVVS----KGALYTATRDGWVKYFILHNETL-VNWKH-----IDSQSLLGLTTTKD----GGVIL 109 (351)
Q Consensus 44 ~~i~~~~~~~pe~i~~d~~----~g~lyv~~~~g~I~~~d~~~g~~-~~~~~-----~~~~p~~gl~~d~~----G~L~v 109 (351)
..+..+.-....+++++|. +..++++..++.|..|+..+++. ..+.. ...... .+++.++ |++++
T Consensus 11 ~~~~~~h~~~v~~i~~~p~~~~~~~~~~~~~~~~~v~vw~~~~~~~~~~~~~~~~~~~~~~v~-~~~~~~~~~~~~~~l~ 89 (366)
T 3k26_A 11 NSLKEDHNQPLFGVQFNWHSKEGDPLVFATVGSNRVTLYECHSQGEIRLLQSYVDADADENFY-TCAWTYDSNTSHPLLA 89 (366)
T ss_dssp EEEECTTCSCEEEEEECTTCCTTSCEEEEEEETTEEEEEEECGGGCEEEEEEEECSCTTCCEE-EEEEEECTTTCCEEEE
T ss_pred EEeecCCCCceEEEEEecccCCCCceEEEECCCCEEEEEEcCCCcEEEeeeeccccCCCCcEE-EEEeccCCCCCCCEEE
Confidence 3455554445568999863 45688888889999999875543 23221 123355 8888877 55555
Q ss_pred EeCCCCeEEEc--CCC--eEEecCCCCCcccEEEcc-CCcEEEEeCCCccCCcccccccccccCCceEEEEeCCCCeEEE
Q 018705 110 CDNEKGLLKVT--EEG--VEAIVPDASFTNDVIAAS-DGTLYFTVASTKYTPTDFYKDMAEGKPYGQLRKYDPKLKETTV 184 (351)
Q Consensus 110 ~d~~~gl~~~~--~~g--~~~l~~~~~~~n~l~~d~-dG~ly~t~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~~~~~~ 184 (351)
+....+.+++. .++ ...+......+.++++.+ ++.+.++.+. +|.|..||..+++...
T Consensus 90 ~~~~dg~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~s~~~-----------------dg~i~iwd~~~~~~~~ 152 (366)
T 3k26_A 90 VAGSRGIIRIINPITMQCIKHYVGHGNAINELKFHPRDPNLLLSVSK-----------------DHALRLWNIQTDTLVA 152 (366)
T ss_dssp EEETTCEEEEECTTTCCEEEEEESCCSCEEEEEECSSCTTEEEEEET-----------------TSCEEEEETTTTEEEE
T ss_pred EecCCCEEEEEEchhceEeeeecCCCCcEEEEEECCCCCCEEEEEeC-----------------CCeEEEEEeecCeEEE
Confidence 54455656555 245 455544446789999999 7877776543 4689999988777655
Q ss_pred ee----cCccccceEEEcCCCCEEEEEecce--eEE
Q 018705 185 LH----EGFYFANGIALSKNEDFVVVCESWK--RYW 214 (351)
Q Consensus 185 ~~----~~~~~~ngi~~~~dg~~lyv~~~~~--~~~ 214 (351)
.. ........++++++++.++.+..++ ++|
T Consensus 153 ~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~ 188 (366)
T 3k26_A 153 IFGGVEGHRDEVLSADYDLLGEKIMSCGMDHSLKLW 188 (366)
T ss_dssp EECSTTSCSSCEEEEEECTTSSEEEEEETTSCEEEE
T ss_pred EecccccccCceeEEEECCCCCEEEEecCCCCEEEE
Confidence 43 2334567899999999777776665 444
No 196
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=98.60 E-value=7e-05 Score=68.23 Aligned_cols=177 Identities=11% Similarity=0.078 Sum_probs=108.3
Q ss_pred CCceEEE-----ee-CCCeEEEEEcCCEEEEEEcCCCe-------E-EEEeecCCccccceEEcCCCCEEEEeCCCCeEE
Q 018705 53 HPEDVSV-----VV-SKGALYTATRDGWVKYFILHNET-------L-VNWKHIDSQSLLGLTTTKDGGVILCDNEKGLLK 118 (351)
Q Consensus 53 ~pe~i~~-----d~-~~g~lyv~~~~g~I~~~d~~~g~-------~-~~~~~~~~~p~~gl~~d~~G~L~v~d~~~gl~~ 118 (351)
.-.++++ .+ ++..|.++..|+.|..||..+++ . ..+........ .+++++++.+.++....+.++
T Consensus 23 ~V~~~~~~~s~~~~~d~~~l~sgs~D~~v~iWd~~~~~~~~~~~~~~~~l~~h~~~V~-~~~~~~~~~~l~s~s~D~~v~ 101 (343)
T 2xzm_R 23 WVTSIVAGFSQKENEDSPVLISGSRDKTVMIWKLYEEEQNGYFGIPHKALTGHNHFVS-DLALSQENCFAISSSWDKTLR 101 (343)
T ss_dssp CEEEEEECCCSSTTCCCCEEEEEETTSCEEEEEECSSCCSSBSEEEEEEECCCSSCEE-EEEECSSTTEEEEEETTSEEE
T ss_pred hhhheeeEEEeecCCCCCEEEEEcCCCEEEEEECCcCCcccccccccchhccCCCceE-EEEECCCCCEEEEEcCCCcEE
Confidence 3457777 43 45678889999999999875432 1 12222233455 899999998877766677777
Q ss_pred Ec--CCC--eEEecCCCCCcccEEEccCCcEEEEeCCCccCCcccccccccccCCceEEEEeCCCCeEEEee---cCccc
Q 018705 119 VT--EEG--VEAIVPDASFTNDVIAASDGTLYFTVASTKYTPTDFYKDMAEGKPYGQLRKYDPKLKETTVLH---EGFYF 191 (351)
Q Consensus 119 ~~--~~g--~~~l~~~~~~~n~l~~d~dG~ly~t~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~~~~~~~~---~~~~~ 191 (351)
++ .++ ...+......+++++++|+|+..++.+. ++.|..||.......... .....
T Consensus 102 lwd~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~~~-----------------d~~i~~wd~~~~~~~~~~~~~~~~~~ 164 (343)
T 2xzm_R 102 LWDLRTGTTYKRFVGHQSEVYSVAFSPDNRQILSAGA-----------------EREIKLWNILGECKFSSAEKENHSDW 164 (343)
T ss_dssp EEETTSSCEEEEEECCCSCEEEEEECSSTTEEEEEET-----------------TSCEEEEESSSCEEEECCTTTSCSSC
T ss_pred EEECCCCcEEEEEcCCCCcEEEEEECCCCCEEEEEcC-----------------CCEEEEEeccCCceeeeecccCCCce
Confidence 76 355 4555444467889999999987776654 467888887643332222 11223
Q ss_pred cceEEEcCCC----------CEEEEEecce--eEEeecCCCCceeEEeccCCCCCCceEECCCCCEEEEEe
Q 018705 192 ANGIALSKNE----------DFVVVCESWK--RYWLKGDRAGILDAFIENLPGGPDNINLAPDGSFWIGLI 250 (351)
Q Consensus 192 ~ngi~~~~dg----------~~lyv~~~~~--~~~i~~~~~~~~~~~~~~~~g~pd~i~~d~~G~lwva~~ 250 (351)
...++++|++ ..+..+..++ ++|- ........+. ...+....++++++|++.++..
T Consensus 165 v~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd--~~~~~~~~~~-~h~~~v~~~~~s~~g~~l~sgs 232 (343)
T 2xzm_R 165 VSCVRYSPIMKSANKVQPFAPYFASVGWDGRLKVWN--TNFQIRYTFK-AHESNVNHLSISPNGKYIATGG 232 (343)
T ss_dssp EEEEEECCCCCSCSCCCSSCCEEEEEETTSEEEEEE--TTTEEEEEEE-CCSSCEEEEEECTTSSEEEEEE
T ss_pred eeeeeeccccccccccCCCCCEEEEEcCCCEEEEEc--CCCceeEEEc-CccccceEEEECCCCCEEEEEc
Confidence 5678888876 4455555555 5552 2211112222 2223345678999998766654
No 197
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=98.60 E-value=3.9e-05 Score=82.01 Aligned_cols=230 Identities=14% Similarity=0.088 Sum_probs=140.8
Q ss_pred CCceEEEeeCCCeEEEEEcCCEEEEEEcCCCeEE-EEeecCCccccceEEcCC--CCEEEEeCCCCeEEEc--CCC--eE
Q 018705 53 HPEDVSVVVSKGALYTATRDGWVKYFILHNETLV-NWKHIDSQSLLGLTTTKD--GGVILCDNEKGLLKVT--EEG--VE 125 (351)
Q Consensus 53 ~pe~i~~d~~~g~lyv~~~~g~I~~~d~~~g~~~-~~~~~~~~p~~gl~~d~~--G~L~v~d~~~gl~~~~--~~g--~~ 125 (351)
...+++++|++..+.++..+|.|..||..+++.. .+........ .+++.++ +.++++....+.++++ .++ ..
T Consensus 659 ~v~~~~~s~~~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~~v~-~~~~~~~~~~~~l~sg~~d~~v~vwd~~~~~~~~ 737 (1249)
T 3sfz_A 659 EVLCCAFSSDDSYIATCSADKKVKIWDSATGKLVHTYDEHSEQVN-CCHFTNKSNHLLLATGSNDFFLKLWDLNQKECRN 737 (1249)
T ss_dssp CEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEE-EEEECSSSSCCEEEEEETTSCEEEEETTSSSEEE
T ss_pred CEEEEEEecCCCEEEEEeCCCeEEEEECCCCceEEEEcCCCCcEE-EEEEecCCCceEEEEEeCCCeEEEEECCCcchhh
Confidence 4467899987778889999999999999888653 3333344455 8888874 4455555455655555 345 44
Q ss_pred EecCCCCCcccEEEccCCcEEEEeCCCccCCcccccccccccCCceEEEEeCCCCeEEEeecC--------------ccc
Q 018705 126 AIVPDASFTNDVIAASDGTLYFTVASTKYTPTDFYKDMAEGKPYGQLRKYDPKLKETTVLHEG--------------FYF 191 (351)
Q Consensus 126 ~l~~~~~~~n~l~~d~dG~ly~t~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~~~~~~~~~~--------------~~~ 191 (351)
.+......+++++++++|...++.+. +|.|..||..+++....... ...
T Consensus 738 ~~~~h~~~v~~~~~sp~~~~l~s~s~-----------------dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 800 (1249)
T 3sfz_A 738 TMFGHTNSVNHCRFSPDDELLASCSA-----------------DGTLRLWDVRSANERKSINVKRFFLSSEDPPEDVEVI 800 (1249)
T ss_dssp EECCCSSCEEEEEECSSTTEEEEEES-----------------SSEEEEEEGGGTEEEEEEECCCCC--------CCCCC
T ss_pred eecCCCCCEEEEEEecCCCEEEEEEC-----------------CCeEEEEeCCCCcccceecccccccccCCccccccce
Confidence 45444467899999999987777654 46788888766544322110 113
Q ss_pred cceEEEcCCCCEEEEEecce-eEEeecCCCCceeEEeccCCCCCCceEECCCCCEEEEEecCCchhhhhhhcChhHHHHH
Q 018705 192 ANGIALSKNEDFVVVCESWK-RYWLKGDRAGILDAFIENLPGGPDNINLAPDGSFWIGLIKMNQTGVRAIQKCREKWELL 270 (351)
Q Consensus 192 ~ngi~~~~dg~~lyv~~~~~-~~~i~~~~~~~~~~~~~~~~g~pd~i~~d~~G~lwva~~~~~~~~~~~~~~~~~~~~~~ 270 (351)
...++++++|+.+.++..+. .+|-. ........+.....+....++++++|++.++...
T Consensus 801 v~~~~~s~dg~~l~~~~~~~v~~~d~-~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~------------------- 860 (1249)
T 3sfz_A 801 VKCCSWSADGDKIIVAAKNKVLLFDI-HTSGLLAEIHTGHHSTIQYCDFSPYDHLAVIALS------------------- 860 (1249)
T ss_dssp BCCCCBCTTSSEEEEEETTEEEEEET-TTCCEEEEEECSSSSCCCEEEECSSTTEEEEECS-------------------
T ss_pred EEEEEECCCCCEEEEEcCCcEEEEEe-cCCCceeEEcCCCCCceEEEEEcCCCCEEEEEeC-------------------
Confidence 55788999999777776544 33321 1112222222223334567889999987766543
Q ss_pred HhccchhhcccCCCCCCceEEEEEECCCCeEEEEEECCCCCcccceeEEEEE-CC-EEEEEecCCCeEEEEeCC
Q 018705 271 DAYPGLISLLLPMGSDAGARVVKVDGNDGKIIRDFNDPDATYISFVTSAAEF-DG-NLYLASLQSNFIGILPLD 342 (351)
Q Consensus 271 ~~~~~~~~~~~~~~~~~~~~v~~~~~~~g~~~~~~~~~~g~~~~~~~~~~~~-~g-~L~ig~~~~~~i~~~~~~ 342 (351)
.+.|..+|..+++.+..+..+.+ .++++... ++ .|..++ ..+.+..+++.
T Consensus 861 -----------------dg~v~vwd~~~~~~~~~~~~h~~----~v~~v~~spdg~~l~s~s-~dg~v~vw~~~ 912 (1249)
T 3sfz_A 861 -----------------QYCVELWNIDSRLKVADCRGHLS----WVHGVMFSPDGSSFLTAS-DDQTIRVWETK 912 (1249)
T ss_dssp -----------------SSCEEEEETTTTEEEEEECCCSS----CEEEEEECTTSSEEEEEE-TTSCEEEEEHH
T ss_pred -----------------CCeEEEEEcCCCceeeecCCCcc----ceEEEEECCCCCEEEEEe-CCCeEEEEEcc
Confidence 13466667656666666654332 46666654 33 344444 35667666643
No 198
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=98.59 E-value=1e-05 Score=73.07 Aligned_cols=218 Identities=14% Similarity=0.070 Sum_probs=133.2
Q ss_pred CCCceEEEeeCCC-eEEEEEcCCEEEEEEc-CCCeEEEEee--cCCccccceEEcCCCCEEEEeCCCCeEEEcC--C---
Q 018705 52 NHPEDVSVVVSKG-ALYTATRDGWVKYFIL-HNETLVNWKH--IDSQSLLGLTTTKDGGVILCDNEKGLLKVTE--E--- 122 (351)
Q Consensus 52 ~~pe~i~~d~~~g-~lyv~~~~g~I~~~d~-~~g~~~~~~~--~~~~p~~gl~~d~~G~L~v~d~~~gl~~~~~--~--- 122 (351)
....++++++++. .++++..+|.|..|+. .+++...+.. ...... .+++.+ ++++++....+.+++.. .
T Consensus 57 ~~v~~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~~~v~-~l~~~~-~~~l~s~~~d~~i~iwd~~~~~~ 134 (342)
T 1yfq_A 57 HPLLCCNFIDNTDLQIYVGTVQGEILKVDLIGSPSFQALTNNEANLGIC-RICKYG-DDKLIAASWDGLIEVIDPRNYGD 134 (342)
T ss_dssp SCEEEEEEEESSSEEEEEEETTSCEEEECSSSSSSEEECBSCCCCSCEE-EEEEET-TTEEEEEETTSEEEEECHHHHTT
T ss_pred CceEEEEECCCCCcEEEEEcCCCeEEEEEeccCCceEeccccCCCCceE-EEEeCC-CCEEEEEcCCCeEEEEccccccc
Confidence 3467899998777 7999999999999998 8887766654 445566 899999 76666555556555542 2
Q ss_pred ------C--eEEecCCCCCcccEEEccCCcEEEEeCCCccCCcccccccccccCCceEEEEeCCC-Ce--EEEee-cCcc
Q 018705 123 ------G--VEAIVPDASFTNDVIAASDGTLYFTVASTKYTPTDFYKDMAEGKPYGQLRKYDPKL-KE--TTVLH-EGFY 190 (351)
Q Consensus 123 ------g--~~~l~~~~~~~n~l~~d~dG~ly~t~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~-~~--~~~~~-~~~~ 190 (351)
+ ...+. ....+.++++++++ ++++.. .+.|..||..+ ++ ..... ..-.
T Consensus 135 ~~~~~~~~~~~~~~-~~~~v~~~~~~~~~-l~~~~~------------------d~~i~i~d~~~~~~~~~~~~~~~~~~ 194 (342)
T 1yfq_A 135 GVIAVKNLNSNNTK-VKNKIFTMDTNSSR-LIVGMN------------------NSQVQWFRLPLCEDDNGTIEESGLKY 194 (342)
T ss_dssp BCEEEEESCSSSSS-SCCCEEEEEECSSE-EEEEES------------------TTEEEEEESSCCTTCCCEEEECSCSS
T ss_pred ccccccCCeeeEEe-eCCceEEEEecCCc-EEEEeC------------------CCeEEEEECCccccccceeeecCCCC
Confidence 2 11111 12567888888887 554432 36788898765 32 22222 2233
Q ss_pred ccceEEEcC-CCCEEEEEecce--eEEeecCC-----CCceeEEeccC--------CCCCCceEECCCCCEEEEEecCCc
Q 018705 191 FANGIALSK-NEDFVVVCESWK--RYWLKGDR-----AGILDAFIENL--------PGGPDNINLAPDGSFWIGLIKMNQ 254 (351)
Q Consensus 191 ~~ngi~~~~-dg~~lyv~~~~~--~~~i~~~~-----~~~~~~~~~~~--------~g~pd~i~~d~~G~lwva~~~~~~ 254 (351)
....+++++ +++.++++...+ ++|--... ......+.... .+....++++++|++.++...
T Consensus 195 ~i~~i~~~~~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~--- 271 (342)
T 1yfq_A 195 QIRDVALLPKEQEGYACSSIDGRVAVEFFDDQGDDYNSSKRFAFRCHRLNLKDTNLAYPVNSIEFSPRHKFLYTAGS--- 271 (342)
T ss_dssp CEEEEEECSGGGCEEEEEETTSEEEEEECCTTCCSTTCTTCEEEECCCCCTTCCSSCCCEEEEEECTTTCCEEEEET---
T ss_pred ceeEEEECCCCCCEEEEEecCCcEEEEEEcCCCcccccccceeeecccccccccccceeEEEEEEcCCCCEEEEecC---
Confidence 567899999 999777777666 45433221 11222232111 112345688888875555432
Q ss_pred hhhhhhhcChhHHHHHHhccchhhcccCCCCCCceEEEEEECCCCeEEEEEECC-CCCcccceeEEEEECCEEEEEec
Q 018705 255 TGVRAIQKCREKWELLDAYPGLISLLLPMGSDAGARVVKVDGNDGKIIRDFNDP-DATYISFVTSAAEFDGNLYLASL 331 (351)
Q Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~g~~~~~~~~~-~g~~~~~~~~~~~~~g~L~ig~~ 331 (351)
.+.|..+|..+++.+..+... .+ .++++..++..|..++.
T Consensus 272 ---------------------------------dg~i~vwd~~~~~~~~~~~~~h~~----~v~~~~~~~~~l~s~s~ 312 (342)
T 1yfq_A 272 ---------------------------------DGIISCWNLQTRKKIKNFAKFNED----SVVKIACSDNILCLATS 312 (342)
T ss_dssp ---------------------------------TSCEEEEETTTTEEEEECCCCSSS----EEEEEEECSSEEEEEEE
T ss_pred ---------------------------------CceEEEEcCccHhHhhhhhcccCC----CceEecCCCCeEEEEec
Confidence 134777888568877777544 32 35555533445655554
No 199
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=98.59 E-value=2.6e-05 Score=73.20 Aligned_cols=179 Identities=13% Similarity=0.087 Sum_probs=106.4
Q ss_pred CCceEEEeeCCCeEEEEEcCCEEEEEEcCCCe------------EEEEeecC------------CccccceEEcCCC--C
Q 018705 53 HPEDVSVVVSKGALYTATRDGWVKYFILHNET------------LVNWKHID------------SQSLLGLTTTKDG--G 106 (351)
Q Consensus 53 ~pe~i~~d~~~g~lyv~~~~g~I~~~d~~~g~------------~~~~~~~~------------~~p~~gl~~d~~G--~ 106 (351)
.-.+++++|++..|.++..+|.|..|+..+++ ...+.... .... .+++.+++ .
T Consensus 30 ~V~~v~~s~~g~~la~g~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~-~l~~~~~~~~~ 108 (447)
T 3dw8_B 30 IISTVEFNHSGELLATGDKGGRVVIFQQEQENKIQSHSRGEYNVYSTFQSHEPEFDYLKSLEIEEKIN-KIRWLPQKNAA 108 (447)
T ss_dssp SEEEEEECSSSSEEEEEETTSEEEEEEECC-----CCCCCCEEEEEEEECCCCEEEGGGTEEECCCCC-EEEECCCCSSS
T ss_pred cEEEEEECCCCCEEEEEcCCCeEEEEEecCCCCCCcccccceeEecccccccccccccccccccCceE-EEEEcCCCCcc
Confidence 34688999877888999999999999986654 22333222 3355 89999887 5
Q ss_pred EEEEeCCCCeEEEcC--CC-eE----------------------------------------Ee-cCCCCCcccEEEccC
Q 018705 107 VILCDNEKGLLKVTE--EG-VE----------------------------------------AI-VPDASFTNDVIAASD 142 (351)
Q Consensus 107 L~v~d~~~gl~~~~~--~g-~~----------------------------------------~l-~~~~~~~n~l~~d~d 142 (351)
++++....+.++++. ++ .. .+ ......+.+++++++
T Consensus 109 ~l~s~s~d~~i~iw~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~ 188 (447)
T 3dw8_B 109 QFLLSTNDKTIKLWKISERDKRPEGYNLKEEDGRYRDPTTVTTLRVPVFRPMDLMVEASPRRIFANAHTYHINSISINSD 188 (447)
T ss_dssp EEEEEECSSCEEEEEEEEEEEEEECCSCC--------CCCCCSCCCCEEEEEEEEEEEEEEEEECSCCSSCCCEEEECTT
T ss_pred eEEEeCCCCeEEEEecccccCCcceecccCccccccCcccccceEeccccchheeeeccceEEeccCCCcceEEEEEcCC
Confidence 555545556566552 22 11 11 112256888999999
Q ss_pred CcEEEEeCCCccCCcccccccccccCCceEEEEeCCCC-eEEEee--------cCccccceEEEcCCC-CEEEEEecce-
Q 018705 143 GTLYFTVASTKYTPTDFYKDMAEGKPYGQLRKYDPKLK-ETTVLH--------EGFYFANGIALSKNE-DFVVVCESWK- 211 (351)
Q Consensus 143 G~ly~t~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~~-~~~~~~--------~~~~~~ngi~~~~dg-~~lyv~~~~~- 211 (351)
|.++++. . ++.|..||..++ +..... ..-...+.++++|++ +.++.+..++
T Consensus 189 ~~~l~s~-~-----------------d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~ 250 (447)
T 3dw8_B 189 YETYLSA-D-----------------DLRINLWHLEITDRSFNIVDIKPANMEELTEVITAAEFHPNSCNTFVYSSSKGT 250 (447)
T ss_dssp SSEEEEE-C-----------------SSEEEEEETTEEEEEEEEEECCCSSGGGCCCCEEEEEECSSCTTEEEEEETTSC
T ss_pred CCEEEEe-C-----------------CCeEEEEECCCCCceeeeeecccccccccCcceEEEEECCCCCcEEEEEeCCCe
Confidence 9877765 3 467888887632 222111 122346789999998 7677776666
Q ss_pred -eEEee-cCCC--CceeEEeccCC-----------CCCCceEECCCCCEEEEEe
Q 018705 212 -RYWLK-GDRA--GILDAFIENLP-----------GGPDNINLAPDGSFWIGLI 250 (351)
Q Consensus 212 -~~~i~-~~~~--~~~~~~~~~~~-----------g~pd~i~~d~~G~lwva~~ 250 (351)
++|-. .... .....+..... +....++++++|++.++..
T Consensus 251 i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~ 304 (447)
T 3dw8_B 251 IRLCDMRASALCDRHSKLFEEPEDPSNRSFFSEIISSISDVKFSHSGRYMMTRD 304 (447)
T ss_dssp EEEEETTTCSSSCTTCEEECCC-----CCHHHHHTTCEEEEEECTTSSEEEEEE
T ss_pred EEEEECcCCccccceeeEeccCCCccccccccccCceEEEEEECCCCCEEEEee
Confidence 55522 1110 01233322110 1235678899998777654
No 200
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=98.59 E-value=1.9e-05 Score=78.60 Aligned_cols=184 Identities=11% Similarity=-0.024 Sum_probs=105.4
Q ss_pred eEEEe--eCCCe-EEEE-EcCCEEEEEEcC--C-CeEEEEee-----cCCccccceEEcCCCC-EEEEeCC---------
Q 018705 56 DVSVV--VSKGA-LYTA-TRDGWVKYFILH--N-ETLVNWKH-----IDSQSLLGLTTTKDGG-VILCDNE--------- 113 (351)
Q Consensus 56 ~i~~d--~~~g~-lyv~-~~~g~I~~~d~~--~-g~~~~~~~-----~~~~p~~gl~~d~~G~-L~v~d~~--------- 113 (351)
++++. |+++. ++.+ ..+.+|+.++.. + ++.+.+.. ...... .+++++||+ |+.+...
T Consensus 81 ~~~~~~SPDg~~~la~~~~~~~~l~~~~~~~~g~~~~~~l~~~~~~~~~~~~~-~~~~spDg~~l~~~~~~~~~~~~~~~ 159 (662)
T 3azo_A 81 PWAGVPRPAGGPLLVFTHFGDQRLYAFEPDAPGGAVPRPLTPVSAVGGGLRWA-DPVLLPERGEVWCMAEEFTGEGPSDV 159 (662)
T ss_dssp CEEEECCSSSSCEEEEEBTTTCCEEEECTTSTTCCCCEECSCCCCSTTCEEEE-EEEEETTTTEEEEEEEEECSSSTTCE
T ss_pred cceeeeecCCCeEEEEEECCCCeEEEEcCCCCCCCCCEeccCCccCCCCcccc-CcEECCCCCEEEEEEecccCCCCCCc
Confidence 45454 66766 5443 346789999975 3 66555543 233456 889999996 4444322
Q ss_pred -CCeEEEcC-C------C-eEEec-CCCCCcccEEEccCCc-EEEEeCCCccCCcccccccccccCCceEEEEeCC-CC-
Q 018705 114 -KGLLKVTE-E------G-VEAIV-PDASFTNDVIAASDGT-LYFTVASTKYTPTDFYKDMAEGKPYGQLRKYDPK-LK- 180 (351)
Q Consensus 114 -~gl~~~~~-~------g-~~~l~-~~~~~~n~l~~d~dG~-ly~t~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~-~~- 180 (351)
..++.++. + + .+.+. .......+++++|||+ |+++..... ... | ....|+.+|.+ ++
T Consensus 160 ~~~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~SpDG~~la~~~~~~~--~~~-----~---~~~~i~~~d~~~~g~ 229 (662)
T 3azo_A 160 RRFLAAVPLDGSAAADRSAVRELSDDAHRFVTGPRLSPDGRQAVWLAWDHP--RMP-----W---EGTELKTARVTEDGR 229 (662)
T ss_dssp EEEEEEEETTSTTTTCGGGSEESSCSCSSEECCCEECTTSSEEEEEEECTT--CCT-----T---TCEEEEEEEECTTSC
T ss_pred eeEEEEEECCCCccccCCceeEEEecCCCcccCceECCCCCEEEEEECCCC--CCC-----C---CCcEEEEEEECCCCc
Confidence 24677773 5 7 66665 4445677889999995 555542210 000 0 12469999987 46
Q ss_pred --eEEEeecC-ccccceEEEcCCCCEEEEEecce--eEEeecCCCCceeEEeccCCCC--------CCceEECCCCCEEE
Q 018705 181 --ETTVLHEG-FYFANGIALSKNEDFVVVCESWK--RYWLKGDRAGILDAFIENLPGG--------PDNINLAPDGSFWI 247 (351)
Q Consensus 181 --~~~~~~~~-~~~~ngi~~~~dg~~lyv~~~~~--~~~i~~~~~~~~~~~~~~~~g~--------pd~i~~d~~G~lwv 247 (351)
+.+.+... ......++++|||+.+|.++..+ +++.-+...++.+.+....... ...+++.++|++++
T Consensus 230 ~~~~~~l~~~~~~~~~~~~~spdg~l~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~~~~p~w~~~~~~~~~~~~~~~~~ 309 (662)
T 3azo_A 230 FADTRTLLGGPEEAIAQAEWAPDGSLIVATDRTGWWNLHRVDPATGAATQLCRREEEFAGPLWTPGMRWFAPLANGLIAV 309 (662)
T ss_dssp EEEEEEEEEETTBCEEEEEECTTSCEEEEECTTSSCEEEEECTTTCCEEESSCCSSBSSCCCCSTTCCSEEECTTSCEEE
T ss_pred ccccEEeCCCCCceEcceEECCCCeEEEEECCCCCeEEEEEECCCCceeecccccccccCccccccCceEeEeCCCEEEE
Confidence 55555443 34567889999999444444444 5665443233333222110000 23466777888766
Q ss_pred EEe
Q 018705 248 GLI 250 (351)
Q Consensus 248 a~~ 250 (351)
...
T Consensus 310 ~~~ 312 (662)
T 3azo_A 310 VHG 312 (662)
T ss_dssp EEB
T ss_pred EEE
Confidence 643
No 201
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=98.59 E-value=2.1e-05 Score=72.51 Aligned_cols=187 Identities=18% Similarity=0.254 Sum_probs=105.9
Q ss_pred EEEeeCCCeEEEEEc-CC--EEEEEEcCCCeEEEEeecCCc-cccceEEcCCCC-EEEEeCCCCeEEEcC-CC-eEEecC
Q 018705 57 VSVVVSKGALYTATR-DG--WVKYFILHNETLVNWKHIDSQ-SLLGLTTTKDGG-VILCDNEKGLLKVTE-EG-VEAIVP 129 (351)
Q Consensus 57 i~~d~~~g~lyv~~~-~g--~I~~~d~~~g~~~~~~~~~~~-p~~gl~~d~~G~-L~v~d~~~gl~~~~~-~g-~~~l~~ 129 (351)
++++|++..++.... +| +|+.+|..+++.+........ .. +.+++++|+ |+++.....++.++. ++ .+.+..
T Consensus 41 ~~~SpDg~~l~~~~~~~g~~~l~~~d~~~g~~~~lt~~~~~~~~-~~~~spdg~~l~~~~~~~~l~~~d~~~g~~~~~~~ 119 (388)
T 3pe7_A 41 KCFTRDGSKLLFGGAFDGPWNYYLLDLNTQVATQLTEGRGDNTF-GGFLSPDDDALFYVKDGRNLMRVDLATLEENVVYQ 119 (388)
T ss_dssp CCBCTTSCEEEEEECTTSSCEEEEEETTTCEEEECCCSSCBCSS-SCEECTTSSEEEEEETTTEEEEEETTTCCEEEEEE
T ss_pred ccCCCCCCEEEEEEcCCCCceEEEEeCCCCceEEeeeCCCCCcc-ceEEcCCCCEEEEEeCCCeEEEEECCCCcceeeee
Confidence 678877776655554 55 599999988887665443332 34 678999995 666665556888885 55 433322
Q ss_pred -CCCCcc--cEEEccCCcEEEEeCC--CccCC-ccc--ccccccccCCceEEEEeCCCCeEEEeecCccccceEEEcC-C
Q 018705 130 -DASFTN--DVIAASDGTLYFTVAS--TKYTP-TDF--YKDMAEGKPYGQLRKYDPKLKETTVLHEGFYFANGIALSK-N 200 (351)
Q Consensus 130 -~~~~~n--~l~~d~dG~ly~t~~~--~~~~~-~~~--~~~~~~~~~~g~l~~~d~~~~~~~~~~~~~~~~ngi~~~~-d 200 (351)
...... ....++||...+.... ..+.. ..+ ....+.......|+++|.++++.+.+.........++++| |
T Consensus 120 ~~~~~~~~~~~~~~~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~sp~d 199 (388)
T 3pe7_A 120 VPAEWVGYGTWVANSDCTKLVGIEIRREDWVPLTDWKKFHEFYFTKPCCRLMRVDLKTGESTVILQENQWLGHPIYRPYD 199 (388)
T ss_dssp CCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHGGGCCCEEEEEEETTTCCEEEEEEESSCEEEEEEETTE
T ss_pred chhhcccccceeECCCCCeeccccccCcccccccccchhhhhhccCCcceEEEEECCCCceEEeecCCccccccEECCCC
Confidence 111121 2235788876653211 00100 000 0012223345689999999898877765555567899999 9
Q ss_pred CCEEEEEecc-----e-eEEeecCCCCceeEEeccCCC-CCCceEECCCCC
Q 018705 201 EDFVVVCESW-----K-RYWLKGDRAGILDAFIENLPG-GPDNINLAPDGS 244 (351)
Q Consensus 201 g~~lyv~~~~-----~-~~~i~~~~~~~~~~~~~~~~g-~pd~i~~d~~G~ 244 (351)
|+.|.++... . ++|+-+...+..+.+.....+ ......++++|+
T Consensus 200 g~~l~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~spdg~ 250 (388)
T 3pe7_A 200 DSTVAFCHEGPHDLVDARMWLINEDGTNMRKVKTHAEGESCTHEFWVPDGS 250 (388)
T ss_dssp EEEEEEEECSCTTTSSCSEEEEETTSCCCEESCCCCTTEEEEEEEECTTSS
T ss_pred CCEEEEEEecCCCCCcceEEEEeCCCCceEEeeeCCCCcccccceECCCCC
Confidence 9876654432 2 555543322333333221111 112357899997
No 202
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=98.58 E-value=4.9e-05 Score=81.26 Aligned_cols=233 Identities=14% Similarity=0.098 Sum_probs=142.5
Q ss_pred cCCCceEEEeeCCCeEEEEEcCCEEEEEEcCCCeEE-EEeecCCccccceEEcCCCCEEEEeCCCCeEEEc--CCC--eE
Q 018705 51 VNHPEDVSVVVSKGALYTATRDGWVKYFILHNETLV-NWKHIDSQSLLGLTTTKDGGVILCDNEKGLLKVT--EEG--VE 125 (351)
Q Consensus 51 ~~~pe~i~~d~~~g~lyv~~~~g~I~~~d~~~g~~~-~~~~~~~~p~~gl~~d~~G~L~v~d~~~gl~~~~--~~g--~~ 125 (351)
...-.+++++|++..+.++..+|.|..||..+++.. .+........ .++++++|++.++....+.++++ .++ ..
T Consensus 615 ~~~v~~~~~s~~~~~l~s~~~d~~i~vw~~~~~~~~~~~~~h~~~v~-~~~~s~~~~~l~s~~~d~~v~vwd~~~~~~~~ 693 (1249)
T 3sfz_A 615 TDAVYHACFSQDGQRIASCGADKTLQVFKAETGEKLLDIKAHEDEVL-CCAFSSDDSYIATCSADKKVKIWDSATGKLVH 693 (1249)
T ss_dssp SSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEE-EEEECTTSSEEEEEETTSEEEEEETTTCCEEE
T ss_pred cccEEEEEECCCCCEEEEEeCCCeEEEEECCCCCEEEEeccCCCCEE-EEEEecCCCEEEEEeCCCeEEEEECCCCceEE
Confidence 344568899987788888999999999998777643 3333345566 89999999877766566666666 355 55
Q ss_pred EecCCCCCcccEEEccCC--cEEEEeCCCccCCcccccccccccCCceEEEEeCCCCeEEEee-cCccccceEEEcCCCC
Q 018705 126 AIVPDASFTNDVIAASDG--TLYFTVASTKYTPTDFYKDMAEGKPYGQLRKYDPKLKETTVLH-EGFYFANGIALSKNED 202 (351)
Q Consensus 126 ~l~~~~~~~n~l~~d~dG--~ly~t~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~~~~~~~~-~~~~~~ngi~~~~dg~ 202 (351)
.+......+..+++.+++ .+.++.+. ++.|..||..+++..... ......+.++++|+++
T Consensus 694 ~~~~~~~~v~~~~~~~~~~~~~l~sg~~-----------------d~~v~vwd~~~~~~~~~~~~h~~~v~~~~~sp~~~ 756 (1249)
T 3sfz_A 694 TYDEHSEQVNCCHFTNKSNHLLLATGSN-----------------DFFLKLWDLNQKECRNTMFGHTNSVNHCRFSPDDE 756 (1249)
T ss_dssp EEECCSSCEEEEEECSSSSCCEEEEEET-----------------TSCEEEEETTSSSEEEEECCCSSCEEEEEECSSTT
T ss_pred EEcCCCCcEEEEEEecCCCceEEEEEeC-----------------CCeEEEEECCCcchhheecCCCCCEEEEEEecCCC
Confidence 554444678888998854 45555433 467999998877654333 3334567899999999
Q ss_pred EEEEEecce--eEEeecCCCCce-eEEe------------ccCCCCCCceEECCCCCEEEEEecCCchhhhhhhcChhHH
Q 018705 203 FVVVCESWK--RYWLKGDRAGIL-DAFI------------ENLPGGPDNINLAPDGSFWIGLIKMNQTGVRAIQKCREKW 267 (351)
Q Consensus 203 ~lyv~~~~~--~~~i~~~~~~~~-~~~~------------~~~~g~pd~i~~d~~G~lwva~~~~~~~~~~~~~~~~~~~ 267 (351)
.++.+..++ ++|-.. .++. ..+. .........++++++|...++...
T Consensus 757 ~l~s~s~dg~v~vwd~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~dg~~l~~~~~---------------- 818 (1249)
T 3sfz_A 757 LLASCSADGTLRLWDVR--SANERKSINVKRFFLSSEDPPEDVEVIVKCCSWSADGDKIIVAAK---------------- 818 (1249)
T ss_dssp EEEEEESSSEEEEEEGG--GTEEEEEEECCCCC--------CCCCCBCCCCBCTTSSEEEEEET----------------
T ss_pred EEEEEECCCeEEEEeCC--CCcccceecccccccccCCccccccceEEEEEECCCCCEEEEEcC----------------
Confidence 777776665 555221 1111 1110 001112345678899987766543
Q ss_pred HHHHhccchhhcccCCCCCCceEEEEEECCCCeEEEEEECCCCCcccceeEEEEE-CCEEEEEecCCCeEEEEeCCC
Q 018705 268 ELLDAYPGLISLLLPMGSDAGARVVKVDGNDGKIIRDFNDPDATYISFVTSAAEF-DGNLYLASLQSNFIGILPLDG 343 (351)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~g~~~~~~~~~~g~~~~~~~~~~~~-~g~L~ig~~~~~~i~~~~~~~ 343 (351)
+.+..+|..+++.+..+.... ...++++... ++.+.+.....+.+..+++.+
T Consensus 819 ---------------------~~v~~~d~~~~~~~~~~~~~~---~~~v~~~~~sp~~~~l~~~~~dg~v~vwd~~~ 871 (1249)
T 3sfz_A 819 ---------------------NKVLLFDIHTSGLLAEIHTGH---HSTIQYCDFSPYDHLAVIALSQYCVELWNIDS 871 (1249)
T ss_dssp ---------------------TEEEEEETTTCCEEEEEECSS---SSCCCEEEECSSTTEEEEECSSSCEEEEETTT
T ss_pred ---------------------CcEEEEEecCCCceeEEcCCC---CCceEEEEEcCCCCEEEEEeCCCeEEEEEcCC
Confidence 246677775666666665322 1234455443 233333333355566666554
No 203
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=98.58 E-value=5.7e-06 Score=75.53 Aligned_cols=177 Identities=10% Similarity=0.001 Sum_probs=108.7
Q ss_pred CCCceEEEeeCCCeEEEEEcCCEEEEEEcCCCeEEEE---eecCCccccceEEcCCCCEEEEeCCCCeEEEc--CCC--e
Q 018705 52 NHPEDVSVVVSKGALYTATRDGWVKYFILHNETLVNW---KHIDSQSLLGLTTTKDGGVILCDNEKGLLKVT--EEG--V 124 (351)
Q Consensus 52 ~~pe~i~~d~~~g~lyv~~~~g~I~~~d~~~g~~~~~---~~~~~~p~~gl~~d~~G~L~v~d~~~gl~~~~--~~g--~ 124 (351)
....++++++++..++++..+|.|..||..+++.... ......+. .++++++|+.+++....+.+++. ..+ .
T Consensus 53 ~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~v~-~~~~~~~~~~l~~~~~d~~v~i~d~~~~~~~ 131 (372)
T 1k8k_C 53 GQVTGVDWAPDSNRIVTCGTDRNAYVWTLKGRTWKPTLVILRINRAAR-CVRWAPNEKKFAVGSGSRVISICYFEQENDW 131 (372)
T ss_dssp SCEEEEEEETTTTEEEEEETTSCEEEEEEETTEEEEEEECCCCSSCEE-EEEECTTSSEEEEEETTSSEEEEEEETTTTE
T ss_pred CcccEEEEeCCCCEEEEEcCCCeEEEEECCCCeeeeeEEeecCCCcee-EEEECCCCCEEEEEeCCCEEEEEEecCCCcc
Confidence 3456899998777888999999999999877764322 22334456 89999999766554444544443 222 1
Q ss_pred ---EEecCC-CCCcccEEEccCCcEEEEeCCCccCCcccccccccccCCceEEEEeC------------------CCCeE
Q 018705 125 ---EAIVPD-ASFTNDVIAASDGTLYFTVASTKYTPTDFYKDMAEGKPYGQLRKYDP------------------KLKET 182 (351)
Q Consensus 125 ---~~l~~~-~~~~n~l~~d~dG~ly~t~~~~~~~~~~~~~~~~~~~~~g~l~~~d~------------------~~~~~ 182 (351)
..+... ...+.+++++++|..+++.+. +|.+..||. .+++.
T Consensus 132 ~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~-----------------dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~ 194 (372)
T 1k8k_C 132 WVCKHIKKPIRSTVLSLDWHPNSVLLAAGSC-----------------DFKCRIFSAYIKEVEERPAPTPWGSKMPFGEL 194 (372)
T ss_dssp EEEEEECTTCCSCEEEEEECTTSSEEEEEET-----------------TSCEEEEECCCTTTSCCCCCBTTBSCCCTTCE
T ss_pred eeeeeeecccCCCeeEEEEcCCCCEEEEEcC-----------------CCCEEEEEcccccccccccccccccccchhhh
Confidence 222222 267889999999987666543 456777773 23333
Q ss_pred E-EeecCccccceEEEcCCCCEEEEEecce--eEEeecCCCCc-eeEEeccCCCCCCceEECCCCCEEEEE
Q 018705 183 T-VLHEGFYFANGIALSKNEDFVVVCESWK--RYWLKGDRAGI-LDAFIENLPGGPDNINLAPDGSFWIGL 249 (351)
Q Consensus 183 ~-~~~~~~~~~ngi~~~~dg~~lyv~~~~~--~~~i~~~~~~~-~~~~~~~~~g~pd~i~~d~~G~lwva~ 249 (351)
. .+.........++++++++.++.+..++ ++|-. ..++ ...+. ........++++++|.+.++.
T Consensus 195 ~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~--~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~ 262 (372)
T 1k8k_C 195 MFESSSSCGWVHGVCFSANGSRVAWVSHDSTVCLADA--DKKMAVATLA-SETLPLLAVTFITESSLVAAG 262 (372)
T ss_dssp EEECCCCSSCEEEEEECSSSSEEEEEETTTEEEEEEG--GGTTEEEEEE-CSSCCEEEEEEEETTEEEEEE
T ss_pred eEecCCCCCeEEEEEECCCCCEEEEEeCCCEEEEEEC--CCCceeEEEc-cCCCCeEEEEEecCCCEEEEE
Confidence 2 2323334567899999999777777665 44422 1122 22222 122223567888888766655
No 204
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=98.58 E-value=0.00023 Score=63.83 Aligned_cols=177 Identities=11% Similarity=0.101 Sum_probs=105.0
Q ss_pred CCCceEEEeeCCCeEEEEEcCCEEEEEEcCCCeEEEEee-cCCccccceEEcCCCCEEEEeCCCCeEEEc-CCC--eEEe
Q 018705 52 NHPEDVSVVVSKGALYTATRDGWVKYFILHNETLVNWKH-IDSQSLLGLTTTKDGGVILCDNEKGLLKVT-EEG--VEAI 127 (351)
Q Consensus 52 ~~pe~i~~d~~~g~lyv~~~~g~I~~~d~~~g~~~~~~~-~~~~p~~gl~~d~~G~L~v~d~~~gl~~~~-~~g--~~~l 127 (351)
....++++++++..++++..|+.|..++...+....... ...... ...+.++++.+++....+.+++. ..+ ....
T Consensus 87 ~~V~~~~~s~dg~~l~s~~~d~~i~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~s~s~d~~~~~~d~~~~~~~~~ 165 (340)
T 4aow_A 87 HFVSDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVL-SVAFSSDNRQIVSGSRDKTIKLWNTLGVCKYTV 165 (340)
T ss_dssp SCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEE-EEEECTTSSCEEEEETTSCEEEECTTSCEEEEE
T ss_pred CCEEEEEECCCCCEEEEEcccccceEEeecccceeeeecCCCCcee-EEEEeecCccceeecCCCeEEEEEeCCCceEEE
Confidence 445688999777788899999999999986665543322 223344 56677777655554444555555 333 2222
Q ss_pred cCC--CCCcccEEEccCC--cEEEEeCCCccCCcccccccccccCCceEEEEeCCCCeEEEeecC-ccccceEEEcCCCC
Q 018705 128 VPD--ASFTNDVIAASDG--TLYFTVASTKYTPTDFYKDMAEGKPYGQLRKYDPKLKETTVLHEG-FYFANGIALSKNED 202 (351)
Q Consensus 128 ~~~--~~~~n~l~~d~dG--~ly~t~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~~~~~~~~~~-~~~~ngi~~~~dg~ 202 (351)
... ...++.+++.+++ .++++.+. ++.|..||..+++......+ -...+.|+++|+++
T Consensus 166 ~~~~~~~~v~~~~~~~~~~~~~~~s~~~-----------------d~~i~i~d~~~~~~~~~~~~h~~~v~~~~~s~~~~ 228 (340)
T 4aow_A 166 QDESHSEWVSCVRFSPNSSNPIIVSCGW-----------------DKLVKVWNLANCKLKTNHIGHTGYLNTVTVSPDGS 228 (340)
T ss_dssp CSSSCSSCEEEEEECSCSSSCEEEEEET-----------------TSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSS
T ss_pred EeccccCcccceEEccCCCCcEEEEEcC-----------------CCEEEEEECCCCceeeEecCCCCcEEEEEECCCCC
Confidence 211 2456677777664 35555433 45788899887766443332 33467899999999
Q ss_pred EEEEEecce--eEEeecCCCCce-eEEeccCCCCCCceEECCCCCEEEEEe
Q 018705 203 FVVVCESWK--RYWLKGDRAGIL-DAFIENLPGGPDNINLAPDGSFWIGLI 250 (351)
Q Consensus 203 ~lyv~~~~~--~~~i~~~~~~~~-~~~~~~~~g~pd~i~~d~~G~lwva~~ 250 (351)
.|+.+..++ ++| +....+. ..+. .......+.+.+++.+..+..
T Consensus 229 ~l~s~s~Dg~i~iw--d~~~~~~~~~~~--~~~~v~~~~~~~~~~~~~~~~ 275 (340)
T 4aow_A 229 LCASGGKDGQAMLW--DLNEGKHLYTLD--GGDIINALCFSPNRYWLCAAT 275 (340)
T ss_dssp EEEEEETTCEEEEE--ETTTTEEEEEEE--CSSCEEEEEECSSSSEEEEEE
T ss_pred EEEEEeCCCeEEEE--EeccCceeeeec--CCceEEeeecCCCCceeeccC
Confidence 777776666 444 2222221 1221 112234567777777666543
No 205
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=98.58 E-value=8.9e-07 Score=81.55 Aligned_cols=144 Identities=7% Similarity=-0.067 Sum_probs=90.9
Q ss_pred CCceEEEeeCCCeEEEEEcCCEEEEEEcCCCeEEE---EeecCCccccceEEcCCCCEEEEeCCCCeEEEcC--CCe---
Q 018705 53 HPEDVSVVVSKGALYTATRDGWVKYFILHNETLVN---WKHIDSQSLLGLTTTKDGGVILCDNEKGLLKVTE--EGV--- 124 (351)
Q Consensus 53 ~pe~i~~d~~~g~lyv~~~~g~I~~~d~~~g~~~~---~~~~~~~p~~gl~~d~~G~L~v~d~~~gl~~~~~--~g~--- 124 (351)
.-.+++++|++..+.++..+|.|..|+..++..+. +........ .+++.++|+++++....+.+++.. ++.
T Consensus 13 ~v~~~~~s~~g~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~h~~~v~-~~~~s~~~~~l~s~s~d~~v~vwd~~~~~~~~ 91 (377)
T 3dwl_C 13 PSYEHAFNSQRTEFVTTTATNQVELYEQDGNGWKHARTFSDHDKIVT-CVDWAPKSNRIVTCSQDRNAYVYEKRPDGTWK 91 (377)
T ss_dssp CCSCCEECSSSSEEECCCSSSCBCEEEEETTEEEECCCBCCCSSCEE-EEEECTTTCCEEEEETTSSEEEC------CCC
T ss_pred cEEEEEECCCCCEEEEecCCCEEEEEEccCCceEEEEEEecCCceEE-EEEEeCCCCEEEEEeCCCeEEEEEcCCCCcee
Confidence 35689999877778888889999999987764322 222334456 899999997666554556666652 222
Q ss_pred --EEecCCCCCcccEEEccCCcEEEEeCCCccCCcccccccccccCCceEEEEeCCCCe----EEEeec-CccccceEEE
Q 018705 125 --EAIVPDASFTNDVIAASDGTLYFTVASTKYTPTDFYKDMAEGKPYGQLRKYDPKLKE----TTVLHE-GFYFANGIAL 197 (351)
Q Consensus 125 --~~l~~~~~~~n~l~~d~dG~ly~t~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~~~----~~~~~~-~~~~~ngi~~ 197 (351)
..+......+.+++++++|.+.++.+. ++.|..||..+++ ...+.. .-.....+++
T Consensus 92 ~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-----------------d~~i~iwd~~~~~~~~~~~~~~~~h~~~v~~~~~ 154 (377)
T 3dwl_C 92 QTLVLLRLNRAATFVRWSPNEDKFAVGSG-----------------ARVISVCYFEQENDWWVSKHLKRPLRSTILSLDW 154 (377)
T ss_dssp CEEECCCCSSCEEEEECCTTSSCCEEEES-----------------SSCEEECCC-----CCCCEEECSSCCSCEEEEEE
T ss_pred eeeEecccCCceEEEEECCCCCEEEEEec-----------------CCeEEEEEECCcccceeeeEeecccCCCeEEEEE
Confidence 222222367888999999876555443 4568888876654 233333 3445678999
Q ss_pred cCCCCEEEEEecce--eEE
Q 018705 198 SKNEDFVVVCESWK--RYW 214 (351)
Q Consensus 198 ~~dg~~lyv~~~~~--~~~ 214 (351)
+|+++.++.+..++ ++|
T Consensus 155 ~~~~~~l~~~~~d~~i~iw 173 (377)
T 3dwl_C 155 HPNNVLLAAGCADRKAYVL 173 (377)
T ss_dssp CTTSSEEEEEESSSCEEEE
T ss_pred cCCCCEEEEEeCCCEEEEE
Confidence 99999777766665 444
No 206
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=98.57 E-value=7.6e-05 Score=67.01 Aligned_cols=185 Identities=14% Similarity=0.110 Sum_probs=102.3
Q ss_pred CCCcCCCceEEEeeCC-CeEEEEEcCCEEEEEEcCCCeE------EEEeecCCccccceEEcCCCCEEEEeCCCCeEEEc
Q 018705 48 EGCVNHPEDVSVVVSK-GALYTATRDGWVKYFILHNETL------VNWKHIDSQSLLGLTTTKDGGVILCDNEKGLLKVT 120 (351)
Q Consensus 48 ~~~~~~pe~i~~d~~~-g~lyv~~~~g~I~~~d~~~g~~------~~~~~~~~~p~~gl~~d~~G~L~v~d~~~gl~~~~ 120 (351)
.|.-..-.+|+++|++ ..|.++..||.|..||..+++. ..+........ .++++++|+++++....+.+++.
T Consensus 35 ~GH~~~V~~v~~sp~~~~~l~S~s~D~~i~vWd~~~~~~~~~~~~~~l~~h~~~V~-~~~~s~dg~~l~s~~~d~~i~~~ 113 (340)
T 4aow_A 35 KGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVS-DVVISSDGQFALSGSWDGTLRLW 113 (340)
T ss_dssp CCCSSCEEEEEECTTCTTEEEEEETTSCEEEEEECCSSSCSEEEEEEECCCSSCEE-EEEECTTSSEEEEEETTSEEEEE
T ss_pred CCccCCEEEEEEeCCCCCEEEEEcCCCeEEEEECCCCCcccceeeEEEeCCCCCEE-EEEECCCCCEEEEEcccccceEE
Confidence 3443445689999765 4677889999999999755431 12222234456 89999999877765556666655
Q ss_pred -C-CC--eEEecCCCCCcccEEEccCCcEEEEeCCCccCCcccccccccccCCceEEEEeCCCCeEEEeec--Cccccce
Q 018705 121 -E-EG--VEAIVPDASFTNDVIAASDGTLYFTVASTKYTPTDFYKDMAEGKPYGQLRKYDPKLKETTVLHE--GFYFANG 194 (351)
Q Consensus 121 -~-~g--~~~l~~~~~~~n~l~~d~dG~ly~t~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~~~~~~~~~--~~~~~ng 194 (351)
. .+ .................+++...++.+. ++.+..||........... .......
T Consensus 114 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~-----------------d~~~~~~d~~~~~~~~~~~~~~~~~v~~ 176 (340)
T 4aow_A 114 DLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSR-----------------DKTIKLWNTLGVCKYTVQDESHSEWVSC 176 (340)
T ss_dssp ETTTTEEEEEEECCSSCEEEEEECTTSSCEEEEET-----------------TSCEEEECTTSCEEEEECSSSCSSCEEE
T ss_pred eecccceeeeecCCCCceeEEEEeecCccceeecC-----------------CCeEEEEEeCCCceEEEEeccccCcccc
Confidence 3 33 2222222245556667777765555433 4567778765443332221 1233456
Q ss_pred EEEcCCCC-EEEE-EecceeEEeecCCCCceeEEeccCCCCCCceEECCCCCEEEEEe
Q 018705 195 IALSKNED-FVVV-CESWKRYWLKGDRAGILDAFIENLPGGPDNINLAPDGSFWIGLI 250 (351)
Q Consensus 195 i~~~~dg~-~lyv-~~~~~~~~i~~~~~~~~~~~~~~~~g~pd~i~~d~~G~lwva~~ 250 (351)
+++++++. .+++ +..++.+.+-+...++.........+....++++++|++.++..
T Consensus 177 ~~~~~~~~~~~~~s~~~d~~i~i~d~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s 234 (340)
T 4aow_A 177 VRFSPNSSNPIIVSCGWDKLVKVWNLANCKLKTNHIGHTGYLNTVTVSPDGSLCASGG 234 (340)
T ss_dssp EEECSCSSSCEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEE
T ss_pred eEEccCCCCcEEEEEcCCCEEEEEECCCCceeeEecCCCCcEEEEEECCCCCEEEEEe
Confidence 77877654 2333 33333222222222222211112223335578899998777654
No 207
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=98.57 E-value=0.00011 Score=67.53 Aligned_cols=233 Identities=11% Similarity=0.026 Sum_probs=132.4
Q ss_pred CCCceEEEee-CCCeEEEEEcCCEEEEEEcCCCeEEEEeecCCccccceEEcC---CCCEEEE-eCCCCeEEEc-CCC--
Q 018705 52 NHPEDVSVVV-SKGALYTATRDGWVKYFILHNETLVNWKHIDSQSLLGLTTTK---DGGVILC-DNEKGLLKVT-EEG-- 123 (351)
Q Consensus 52 ~~pe~i~~d~-~~g~lyv~~~~g~I~~~d~~~g~~~~~~~~~~~p~~gl~~d~---~G~L~v~-d~~~gl~~~~-~~g-- 123 (351)
....++++.+ ++..++++..+|.|..||..+++............ .+.+.+ ++.++++ ...+.+..++ .++
T Consensus 100 ~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~ 178 (408)
T 4a11_B 100 YSVETVQWYPHDTGMFTSSSFDKTLKVWDTNTLQTADVFNFEETVY-SHHMSPVSTKHCLVAVGTRGPKVQLCDLKSGSC 178 (408)
T ss_dssp SCEEEEEECTTCTTCEEEEETTSEEEEEETTTTEEEEEEECSSCEE-EEEECSSCSSCCEEEEEESSSSEEEEESSSSCC
T ss_pred CcEEEEEEccCCCcEEEEEeCCCeEEEeeCCCCccceeccCCCcee-eeEeecCCCCCcEEEEEcCCCeEEEEeCCCcce
Confidence 3456888987 44577888889999999998877654444444455 677765 3445544 4443444444 344
Q ss_pred eEEecCCCCCcccEEEccCCc-EEEEeCCCccCCcccccccccccCCceEEEEeCCCCe--EEEe---------------
Q 018705 124 VEAIVPDASFTNDVIAASDGT-LYFTVASTKYTPTDFYKDMAEGKPYGQLRKYDPKLKE--TTVL--------------- 185 (351)
Q Consensus 124 ~~~l~~~~~~~n~l~~d~dG~-ly~t~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~~~--~~~~--------------- 185 (351)
...+......+.+++++++|. ++++.+. +|.|..||..+++ ...+
T Consensus 179 ~~~~~~~~~~v~~~~~~~~~~~ll~~~~~-----------------dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (408)
T 4a11_B 179 SHILQGHRQEILAVSWSPRYDYILATASA-----------------DSRVKLWDVRRASGCLITLDQHNGKKSQAVESAN 241 (408)
T ss_dssp CEEECCCCSCEEEEEECSSCTTEEEEEET-----------------TSCEEEEETTCSSCCSEECCTTTTCSCCCTTTSS
T ss_pred eeeecCCCCcEEEEEECCCCCcEEEEEcC-----------------CCcEEEEECCCCCcccccccccccccceeecccc
Confidence 555554446788999999986 5655543 4568888765443 1111
Q ss_pred ecCccccceEEEcCCCCEEEEEecce--eEEeecCCCCce-eEEecc-----CCCCCCceEECCCCCEEEEEecCCchhh
Q 018705 186 HEGFYFANGIALSKNEDFVVVCESWK--RYWLKGDRAGIL-DAFIEN-----LPGGPDNINLAPDGSFWIGLIKMNQTGV 257 (351)
Q Consensus 186 ~~~~~~~ngi~~~~dg~~lyv~~~~~--~~~i~~~~~~~~-~~~~~~-----~~g~pd~i~~d~~G~lwva~~~~~~~~~ 257 (351)
.........++++|+++.++.+..++ ++|-. ..++. ..+... .....-....+..+.+.++...
T Consensus 242 ~~~~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------ 313 (408)
T 4a11_B 242 TAHNGKVNGLCFTSDGLHLLTVGTDNRMRLWNS--SNGENTLVNYGKVCNNSKKGLKFTVSCGCSSEFVFVPYG------ 313 (408)
T ss_dssp CSCSSCEEEEEECTTSSEEEEEETTSCEEEEET--TTCCBCCCCCCCCCCCCSSCCCCEECCSSSSCEEEEEET------
T ss_pred ccccCceeEEEEcCCCCEEEEecCCCeEEEEEC--CCCccceeccccccccccccceeEEecCCCceEEEEecC------
Confidence 11123456799999999787777666 44422 11111 111000 0011111122333444444322
Q ss_pred hhhhcChhHHHHHHhccchhhcccCCCCCCceEEEEEECCCCeEEEEEECCCCCcccceeEEEEE-CCE-EEEEecCCCe
Q 018705 258 RAIQKCREKWELLDAYPGLISLLLPMGSDAGARVVKVDGNDGKIIRDFNDPDATYISFVTSAAEF-DGN-LYLASLQSNF 335 (351)
Q Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~g~~~~~~~~~~g~~~~~~~~~~~~-~g~-L~ig~~~~~~ 335 (351)
+.+..+|..+++.+..+..+.+ .++++... +++ |+.++. .+.
T Consensus 314 -------------------------------~~i~v~d~~~~~~~~~~~~~~~----~v~~~~~s~~~~~l~s~~~-dg~ 357 (408)
T 4a11_B 314 -------------------------------STIAVYTVYSGEQITMLKGHYK----TVDCCVFQSNFQELYSGSR-DCN 357 (408)
T ss_dssp -------------------------------TEEEEEETTTCCEEEEECCCSS----CEEEEEEETTTTEEEEEET-TSC
T ss_pred -------------------------------CEEEEEECcCCcceeeeccCCC----eEEEEEEcCCCCEEEEECC-CCe
Confidence 3577788767888888765443 46666655 344 555544 677
Q ss_pred EEEEeCCCCCC
Q 018705 336 IGILPLDGPEP 346 (351)
Q Consensus 336 i~~~~~~~~~~ 346 (351)
|..+++...++
T Consensus 358 i~iw~~~~~~~ 368 (408)
T 4a11_B 358 ILAWVPSLYEP 368 (408)
T ss_dssp EEEEEECC---
T ss_pred EEEEeCCCCCc
Confidence 88888877655
No 208
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=98.56 E-value=8.3e-06 Score=74.66 Aligned_cols=177 Identities=8% Similarity=0.024 Sum_probs=110.7
Q ss_pred ceEEEeeCCCeEEEEEcCCEEEEEEcCCCeEEE--Ee--ecCCccccceEEcCCCCEEEEeCCCCeEEEc--CCC----e
Q 018705 55 EDVSVVVSKGALYTATRDGWVKYFILHNETLVN--WK--HIDSQSLLGLTTTKDGGVILCDNEKGLLKVT--EEG----V 124 (351)
Q Consensus 55 e~i~~d~~~g~lyv~~~~g~I~~~d~~~g~~~~--~~--~~~~~p~~gl~~d~~G~L~v~d~~~gl~~~~--~~g----~ 124 (351)
.+++++|++..|.++..|+.|..|+..+++... .. ....... .++++++|+++++....+.+++. ..+ .
T Consensus 20 ~~l~~sp~g~~las~~~D~~i~iw~~~~~~~~~~~~~~~~h~~~v~-~~~~sp~g~~l~s~s~D~~v~iw~~~~~~~~~~ 98 (345)
T 3fm0_A 20 WFLAWNPAGTLLASCGGDRRIRIWGTEGDSWICKSVLSEGHQRTVR-KVAWSPCGNYLASASFDATTCIWKKNQDDFECV 98 (345)
T ss_dssp EEEEECTTSSCEEEEETTSCEEEEEEETTEEEEEEEECSSCSSCEE-EEEECTTSSEEEEEETTSCEEEEEECCC-EEEE
T ss_pred EEEEECCCCCEEEEEcCCCeEEEEEcCCCcceeeeeeccccCCcEE-EEEECCCCCEEEEEECCCcEEEEEccCCCeEEE
Confidence 478999887888899999999999986665421 11 1223455 89999999877766556666665 233 2
Q ss_pred EEecCCCCCcccEEEccCCcEEEEeCCCccCCcccccccccccCCceEEEEeCCCCe-E---EEeecCccccceEEEcCC
Q 018705 125 EAIVPDASFTNDVIAASDGTLYFTVASTKYTPTDFYKDMAEGKPYGQLRKYDPKLKE-T---TVLHEGFYFANGIALSKN 200 (351)
Q Consensus 125 ~~l~~~~~~~n~l~~d~dG~ly~t~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~~~-~---~~~~~~~~~~ngi~~~~d 200 (351)
..+......+++++++|+|++.++.+. ++.|..||..+++ . ..+.........++++|+
T Consensus 99 ~~~~~h~~~v~~v~~sp~~~~l~s~s~-----------------D~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~p~ 161 (345)
T 3fm0_A 99 TTLEGHENEVKSVAWAPSGNLLATCSR-----------------DKSVWVWEVDEEDEYECVSVLNSHTQDVKHVVWHPS 161 (345)
T ss_dssp EEECCCSSCEEEEEECTTSSEEEEEET-----------------TSCEEEEEECTTSCEEEEEEECCCCSCEEEEEECSS
T ss_pred EEccCCCCCceEEEEeCCCCEEEEEEC-----------------CCeEEEEECCCCCCeEEEEEecCcCCCeEEEEECCC
Confidence 333333367899999999988877654 4567777765432 1 122222344678999999
Q ss_pred CCEEEEEecce--eEEeecCCCCceeEE--eccCCCCCCceEECCCCCEEEEEec
Q 018705 201 EDFVVVCESWK--RYWLKGDRAGILDAF--IENLPGGPDNINLAPDGSFWIGLIK 251 (351)
Q Consensus 201 g~~lyv~~~~~--~~~i~~~~~~~~~~~--~~~~~g~pd~i~~d~~G~lwva~~~ 251 (351)
++.|..+..++ ++|-.. .++.... .....+....++++++|++.++...
T Consensus 162 ~~~l~s~s~d~~i~~w~~~--~~~~~~~~~~~~h~~~v~~l~~sp~g~~l~s~s~ 214 (345)
T 3fm0_A 162 QELLASASYDDTVKLYREE--EDDWVCCATLEGHESTVWSLAFDPSGQRLASCSD 214 (345)
T ss_dssp SSCEEEEETTSCEEEEEEE--TTEEEEEEEECCCSSCEEEEEECTTSSEEEEEET
T ss_pred CCEEEEEeCCCcEEEEEec--CCCEEEEEEecCCCCceEEEEECCCCCEEEEEeC
Confidence 99776666665 555321 1221111 1122223355788888887666543
No 209
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=98.55 E-value=3.5e-06 Score=84.79 Aligned_cols=135 Identities=11% Similarity=0.045 Sum_probs=86.9
Q ss_pred CCceEEEeeCCCeEEEEEcCCEEEEEEcCCCeEEEEeecCC----ccccceEEcCCCCEEE-EeCC---------CCeEE
Q 018705 53 HPEDVSVVVSKGALYTATRDGWVKYFILHNETLVNWKHIDS----QSLLGLTTTKDGGVIL-CDNE---------KGLLK 118 (351)
Q Consensus 53 ~pe~i~~d~~~g~lyv~~~~g~I~~~d~~~g~~~~~~~~~~----~p~~gl~~d~~G~L~v-~d~~---------~gl~~ 118 (351)
.+.+++|.|++..++. ..+|.|+.||..+++.+....... .+. .+++++||+..+ +... ..++.
T Consensus 18 ~~~~~~~spdg~~~~~-~~dg~i~~~d~~~g~~~~~~~~~~~~~~~v~-~~~~SpDg~~l~~~~~~~~~~~~~~~~~i~~ 95 (723)
T 1xfd_A 18 HDPEAKWISDTEFIYR-EQKGTVRLWNVETNTSTVLIEGKKIESLRAI-RYEISPDREYALFSYNVEPIYQHSYTGYYVL 95 (723)
T ss_dssp CCCCCCBSSSSCBCCC-CSSSCEEEBCGGGCCCEEEECTTTTTTTTCS-EEEECTTSSEEEEEESCCCCSSSCCCSEEEE
T ss_pred cccccEEcCCCcEEEE-eCCCCEEEEECCCCcEEEEeccccccccccc-eEEECCCCCEEEEEecCccceeecceeeEEE
Confidence 3678899976665555 678899999998887654433222 256 899999997444 3322 23444
Q ss_pred EcC-CC-eEEecCCC---CCcccEEEccCCc-EEEEeCCCccCCcccccccccccCCceEEEEeCCCCeEEEeecCcc--
Q 018705 119 VTE-EG-VEAIVPDA---SFTNDVIAASDGT-LYFTVASTKYTPTDFYKDMAEGKPYGQLRKYDPKLKETTVLHEGFY-- 190 (351)
Q Consensus 119 ~~~-~g-~~~l~~~~---~~~n~l~~d~dG~-ly~t~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~~~~~~~~~~~~-- 190 (351)
.+. +| .+.+.... ..+..++++|||+ |.++.. +.|+.+|..+++...+.....
T Consensus 96 ~d~~~~~~~~l~~~~~~~~~~~~~~~SPdG~~la~~~~-------------------~~i~~~~~~~g~~~~~~~~~~~~ 156 (723)
T 1xfd_A 96 SKIPHGDPQSLDPPEVSNAKLQYAGWGPKGQQLIFIFE-------------------NNIYYCAHVGKQAIRVVSTGKEG 156 (723)
T ss_dssp EESSSCCCEECCCTTCCSCCCSBCCBCSSTTCEEEEET-------------------TEEEEESSSSSCCEEEECCCBTT
T ss_pred EECCCCceEeccCCccccccccccEECCCCCEEEEEEC-------------------CeEEEEECCCCceEEEecCCCCC
Confidence 553 55 55554322 2477899999995 444332 368999887776655443211
Q ss_pred -----------------ccceEEEcCCCCEEEEEe
Q 018705 191 -----------------FANGIALSKNEDFVVVCE 208 (351)
Q Consensus 191 -----------------~~ngi~~~~dg~~lyv~~ 208 (351)
...++++||||+.|+++.
T Consensus 157 ~~~~g~~~~v~~ee~~~~~~~~~~SpDg~~la~~~ 191 (723)
T 1xfd_A 157 VIYNGLSDWLYEEEILKTHIAHWWSPDGTRLAYAA 191 (723)
T ss_dssp TEEEEECCHHHHHTTSSSSEEEEECTTSSEEEEEE
T ss_pred ceECcccceeEEEEeccCcceEEECCCCCEEEEEE
Confidence 225799999999777764
No 210
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=98.54 E-value=8.9e-06 Score=74.99 Aligned_cols=142 Identities=14% Similarity=0.114 Sum_probs=88.5
Q ss_pred CceEEEeeCCCeEEEEEc------CCEEEEEEcCCCeEE-----EEeecCCccccceEEcCCCCEEEEeCCCCeEEEcC-
Q 018705 54 PEDVSVVVSKGALYTATR------DGWVKYFILHNETLV-----NWKHIDSQSLLGLTTTKDGGVILCDNEKGLLKVTE- 121 (351)
Q Consensus 54 pe~i~~d~~~g~lyv~~~------~g~I~~~d~~~g~~~-----~~~~~~~~p~~gl~~d~~G~L~v~d~~~gl~~~~~- 121 (351)
-.+++|+|++..|.++.. |+.|+.++..+++.. .......... .+++.++++++++.. .+.++++.
T Consensus 45 V~~v~fSpDG~~las~s~d~~~~wd~~v~~~~~~~~~~~~~~~~~~~~~~~~V~-~~~~s~d~~~l~~s~-dg~v~lWd~ 122 (357)
T 4g56_B 45 IGAVRYRRDGALLLAASSLSSRTWGGSIWVFKDPEGAPNESLCTAGVQTEAGVT-DVAWVSEKGILVASD-SGAVELWEI 122 (357)
T ss_dssp EEEEEECSSSCEEEEEECSSSSSCCEEEEEESSCC---CGGGCSEEEECSSCEE-EEEEETTTEEEEEET-TSCEEEC--
T ss_pred EEEEEECCCCCEEEEEcCCCCccccCeEEEEECCCCCcceeEecccCCCCCCEE-EEEEcCCCCEEEEEC-CCEEEEeec
Confidence 468999987777777765 677888876554321 1111223355 899999998888765 45666652
Q ss_pred -CC-eE-E----ecCCCCCcccEEEccCCcEEEEeCCCccCCcccccccccccCCceEEEEeCCCCeEEEeec-Cccccc
Q 018705 122 -EG-VE-A----IVPDASFTNDVIAASDGTLYFTVASTKYTPTDFYKDMAEGKPYGQLRKYDPKLKETTVLHE-GFYFAN 193 (351)
Q Consensus 122 -~g-~~-~----l~~~~~~~n~l~~d~dG~ly~t~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~~~~~~~~~-~~~~~n 193 (351)
++ .. . .......+++++++|+|+..++.+. ++.|..||..+++...... .....+
T Consensus 123 ~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~sgs~-----------------dg~v~iwd~~~~~~~~~~~~h~~~v~ 185 (357)
T 4g56_B 123 LEKESLLVNKFAKYEHDDIVKTLSVFSDGTQAVSGGK-----------------DFSVKVWDLSQKAVLKSYNAHSSEVN 185 (357)
T ss_dssp ------CCCCEEECCCSSCEEEEEECSSSSEEEEEET-----------------TSCEEEEETTTTEEEEEECCCSSCEE
T ss_pred cccceeEEEeeccCCCCCCEEEEEECCCCCEEEEEeC-----------------CCeEEEEECCCCcEEEEEcCCCCCEE
Confidence 33 11 1 1112257889999999987777654 4679999988877654433 234567
Q ss_pred eEEEcCCCCEEEE-Eecce--eEE
Q 018705 194 GIALSKNEDFVVV-CESWK--RYW 214 (351)
Q Consensus 194 gi~~~~dg~~lyv-~~~~~--~~~ 214 (351)
.++++++++.+++ +..++ ++|
T Consensus 186 ~v~~s~~~~~~~~s~~~dg~v~~w 209 (357)
T 4g56_B 186 CVAACPGKDTIFLSCGEDGRILLW 209 (357)
T ss_dssp EEEECTTCSSCEEEEETTSCEEEC
T ss_pred EEEEccCCCceeeeeccCCceEEE
Confidence 8999998864444 44444 444
No 211
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=98.54 E-value=1.4e-05 Score=73.72 Aligned_cols=176 Identities=10% Similarity=-0.017 Sum_probs=103.9
Q ss_pred eEEEeeCCCeEEEEEcCCEEEEEEcCCCeEEEEeecC-Ccc-ccceEEcCCCCEEEEe----------------------
Q 018705 56 DVSVVVSKGALYTATRDGWVKYFILHNETLVNWKHID-SQS-LLGLTTTKDGGVILCD---------------------- 111 (351)
Q Consensus 56 ~i~~d~~~g~lyv~~~~g~I~~~d~~~g~~~~~~~~~-~~p-~~gl~~d~~G~L~v~d---------------------- 111 (351)
+++++|++..|+....++.|+++|..+++.+...... ... .....++++|+++++.
T Consensus 85 ~~~~spdg~~l~~~~~~~~l~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (388)
T 3pe7_A 85 GGFLSPDDDALFYVKDGRNLMRVDLATLEENVVYQVPAEWVGYGTWVANSDCTKLVGIEIRREDWVPLTDWKKFHEFYFT 164 (388)
T ss_dssp SCEECTTSSEEEEEETTTEEEEEETTTCCEEEEEECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHGGG
T ss_pred ceEEcCCCCEEEEEeCCCeEEEEECCCCcceeeeechhhcccccceeECCCCCeeccccccCcccccccccchhhhhhcc
Confidence 6789988888888888889999999888765443322 211 1023457888877632
Q ss_pred -CCCCeEEEcC-CC-eEEecCCCCCcccEEEcc-CCc-EEEEeCCCccCCcccccccccccCCceEEEEeCCCCeEEEee
Q 018705 112 -NEKGLLKVTE-EG-VEAIVPDASFTNDVIAAS-DGT-LYFTVASTKYTPTDFYKDMAEGKPYGQLRKYDPKLKETTVLH 186 (351)
Q Consensus 112 -~~~gl~~~~~-~g-~~~l~~~~~~~n~l~~d~-dG~-ly~t~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~~~~~~~~ 186 (351)
....++.++. +| .+.+......+.+++++| ||. |.++..... ......|+.+|.++++.+.+.
T Consensus 165 ~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~sp~dg~~l~~~~~~~~------------~~~~~~l~~~d~~~~~~~~l~ 232 (388)
T 3pe7_A 165 KPCCRLMRVDLKTGESTVILQENQWLGHPIYRPYDDSTVAFCHEGPH------------DLVDARMWLINEDGTNMRKVK 232 (388)
T ss_dssp CCCEEEEEEETTTCCEEEEEEESSCEEEEEEETTEEEEEEEEECSCT------------TTSSCSEEEEETTSCCCEESC
T ss_pred CCcceEEEEECCCCceEEeecCCccccccEECCCCCCEEEEEEecCC------------CCCcceEEEEeCCCCceEEee
Confidence 1235777774 56 555544335678899999 985 444432200 011347999998777666654
Q ss_pred cCc--cccceEEEcCCCCEEEE-Eecce----eEEeecCCCCceeEEeccCCC------CCCceEECCCCC
Q 018705 187 EGF--YFANGIALSKNEDFVVV-CESWK----RYWLKGDRAGILDAFIENLPG------GPDNINLAPDGS 244 (351)
Q Consensus 187 ~~~--~~~ngi~~~~dg~~lyv-~~~~~----~~~i~~~~~~~~~~~~~~~~g------~pd~i~~d~~G~ 244 (351)
... ......+++|||+.|++ +...+ .+++-+...++.+.+.. .++ .+++..++++|+
T Consensus 233 ~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~g~~~~l~~-~~~~~~~~~~~~~~~~spdg~ 302 (388)
T 3pe7_A 233 THAEGESCTHEFWVPDGSALVYVSYLKGSPDRFIYSADPETLENRQLTS-MPACSHLMSNYDGSLMVGDGS 302 (388)
T ss_dssp CCCTTEEEEEEEECTTSSCEEEEEEETTCCCEEEEEECTTTCCEEEEEE-ECCEEEEEECTTSSEEEEEEC
T ss_pred eCCCCcccccceECCCCCEEEEEecCCCCCcceEEEEecCCCceEEEEc-CCCceeeeecCCCCeEccCCC
Confidence 432 13446789999996644 44322 25555544444433322 222 145556666665
No 212
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=98.54 E-value=0.00013 Score=64.89 Aligned_cols=233 Identities=9% Similarity=-0.003 Sum_probs=132.6
Q ss_pred ceEEEeeCCCeEEEEEcCCEEEEEEcCCCeEEEEee-cCCccccceEEcCCCCEEEEeCCCCeEEEc-C-CC---eEEec
Q 018705 55 EDVSVVVSKGALYTATRDGWVKYFILHNETLVNWKH-IDSQSLLGLTTTKDGGVILCDNEKGLLKVT-E-EG---VEAIV 128 (351)
Q Consensus 55 e~i~~d~~~g~lyv~~~~g~I~~~d~~~g~~~~~~~-~~~~p~~gl~~d~~G~L~v~d~~~gl~~~~-~-~g---~~~l~ 128 (351)
.++++++++..+.++..||.|..|+..+++...... .... ...+..++.+.++....+..++. . .+ ...+.
T Consensus 71 ~~v~~~~~~~~l~sgs~Dg~v~iw~~~~~~~~~~~~~h~~~---~~~~~~~~~~l~s~~~~~~~~~~~~~~~~~~~~~~~ 147 (318)
T 4ggc_A 71 SSVAWIKEGNYLAVGTSSAEVQLWDVQQQKRLRNMTSHSAR---VGSLSWNSYILSSGSRSGHIHHHDVRVAEHHVATLS 147 (318)
T ss_dssp EEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSC---EEEEEEETTEEEEEETTSEEEEEETTSSSCEEEEEE
T ss_pred EEEEECCCCCEEEEEECCCcEEEeecCCceeEEEecCccce---EEEeecCCCEEEEEecCCceEeeecCCCceeEEEEc
Confidence 588999877888999999999999998887543322 2222 23344556665555455555554 2 22 33333
Q ss_pred CCCCCcccEEEccCCcEEEEeCCCccCCcccccccccccCCceEEEEeCCCCeE-----EEeecCccccceEEEcCCCC-
Q 018705 129 PDASFTNDVIAASDGTLYFTVASTKYTPTDFYKDMAEGKPYGQLRKYDPKLKET-----TVLHEGFYFANGIALSKNED- 202 (351)
Q Consensus 129 ~~~~~~n~l~~d~dG~ly~t~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~~~~-----~~~~~~~~~~ngi~~~~dg~- 202 (351)
........++..++|...++... ++.|..||..+++. ............+++++++.
T Consensus 148 ~~~~~~~~~~~~~~~~~l~s~~~-----------------d~~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 210 (318)
T 4ggc_A 148 GHSQEVCGLRWAPDGRHLASGGN-----------------DNLVNVWPSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSN 210 (318)
T ss_dssp CCSSCEEEEEECTTSSEEEEEET-----------------TSCEEEEESSCBTTBSCCSEEECCCCSCEEEEEECTTSTT
T ss_pred CccCceEEEEEcCCCCEEEEEec-----------------CcceeEEECCCCcccccceeeecccCCceEEEEecCCCCc
Confidence 33356777888888877766543 46788888765432 11111122345677777665
Q ss_pred EEEEEecce--eEEeecCCCCceeEEeccCCCCCCceEECCCCCEEEEEecCCchhhhhhhcChhHHHHHHhccchhhcc
Q 018705 203 FVVVCESWK--RYWLKGDRAGILDAFIENLPGGPDNINLAPDGSFWIGLIKMNQTGVRAIQKCREKWELLDAYPGLISLL 280 (351)
Q Consensus 203 ~lyv~~~~~--~~~i~~~~~~~~~~~~~~~~g~pd~i~~d~~G~lwva~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 280 (351)
.++++.... .+.+-+.......... ........+.+.++++..++...
T Consensus 211 ~~~~~~~~~~~~i~lwd~~~~~~~~~~-~~~~~v~~~~~~~~~~~~~~~sg----------------------------- 260 (318)
T 4ggc_A 211 VLATGGGTSDRHIRIWNVCSGACLSAV-DAHSQVCSILWSPHYKELISGHG----------------------------- 260 (318)
T ss_dssp EEEEEECTTTCEEEEEETTTCCEEEEE-ECSSCEEEEEEETTTTEEEEEEC-----------------------------
T ss_pred EEEEEecCCCCEEEEEecccccccccc-cceeeeeeeeecccccceEEEEE-----------------------------
Confidence 333333222 2332222222222111 11112234566677765444321
Q ss_pred cCCCCCCceEEEEEECCCCeEEEEEECCCCCcccceeEEEEE-CCEEEEEecCCCeEEEEeCCCCCC
Q 018705 281 LPMGSDAGARVVKVDGNDGKIIRDFNDPDATYISFVTSAAEF-DGNLYLASLQSNFIGILPLDGPEP 346 (351)
Q Consensus 281 ~~~~~~~~~~v~~~~~~~g~~~~~~~~~~g~~~~~~~~~~~~-~g~L~ig~~~~~~i~~~~~~~~~~ 346 (351)
...+.|..+|..+++.+..+..+.+ .++++... +|++.++....+.|..+++....|
T Consensus 261 -----~~d~~i~iwd~~~~~~~~~l~gH~~----~V~~l~~spdg~~l~S~s~D~~v~iWd~~~~dP 318 (318)
T 4ggc_A 261 -----FAQNQLVIWKYPTMAKVAELKGHTS----RVLSLTMSPDGATVASAAADETLRLWRCFELDP 318 (318)
T ss_dssp -----TTTCCEEEEETTTCCEEEEECCCSS----CEEEEEECTTSSCEEEEETTTEEEEECCSCCCC
T ss_pred -----cCCCEEEEEECCCCcEEEEEcCCCC----CEEEEEEcCCCCEEEEEecCCeEEEEECCCCCC
Confidence 1224577788768888888866543 57777765 455444444467788888887776
No 213
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=98.53 E-value=2.1e-05 Score=73.08 Aligned_cols=86 Identities=7% Similarity=-0.161 Sum_probs=61.3
Q ss_pred CCeEEEEEcC-C----EEEEEEcCCCeEEEEeecCCccccceEEcCCC-CEEEEeC----------CCCeEEEcC-CC--
Q 018705 63 KGALYTATRD-G----WVKYFILHNETLVNWKHIDSQSLLGLTTTKDG-GVILCDN----------EKGLLKVTE-EG-- 123 (351)
Q Consensus 63 ~g~lyv~~~~-g----~I~~~d~~~g~~~~~~~~~~~p~~gl~~d~~G-~L~v~d~----------~~gl~~~~~-~g-- 123 (351)
.+.+|+.... + +|..+|..++++..-...+..| +++++++| .+||++. .+.+..+|. ++
T Consensus 31 ~~~~yV~~~~~~~~~d~vsvID~~t~~v~~~i~vG~~P--~i~~spDg~~lyVan~~~~r~~~G~~~~~VsviD~~T~~v 108 (368)
T 1mda_H 31 SRRSHITLPAYFAGTTENWVSCAGCGVTLGHSLGAFLS--LAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPVTFLP 108 (368)
T ss_dssp TTEEEEEECTTTCSSEEEEEEETTTTEEEEEEEECTTC--EEEECTTSSCEEEEEEEETTTTSSSEEEEEEEECTTTCCE
T ss_pred CCeEEEECCccCCccceEEEEECCCCeEEEEEeCCCCC--ceEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCCE
Confidence 4567876653 3 7999999888876544555667 79999998 6999973 234777774 55
Q ss_pred eEEecCC-------CCCcccEEEccCC-cEEEEeC
Q 018705 124 VEAIVPD-------ASFTNDVIAASDG-TLYFTVA 150 (351)
Q Consensus 124 ~~~l~~~-------~~~~n~l~~d~dG-~ly~t~~ 150 (351)
...+..+ ...|.+++++||| .+|+++.
T Consensus 109 v~~I~v~~~~~~~~g~~P~~ia~SpDGk~lyVan~ 143 (368)
T 1mda_H 109 IADIELPDAPRFSVGPRVHIIGNCASSACLLFFLF 143 (368)
T ss_dssp EEEEEETTSCSCCBSCCTTSEEECTTSSCEEEEEC
T ss_pred EEEEECCCccccccCCCcceEEEcCCCCEEEEEcc
Confidence 4444321 1469999999999 6999874
No 214
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=98.52 E-value=1e-05 Score=76.40 Aligned_cols=183 Identities=9% Similarity=0.104 Sum_probs=107.0
Q ss_pred cCCCceEEEeeCCCeEEEEEc-C------CEEEEEEcCCCeEE-EEeec---CCccccceEEcCCCCEEEEeC-------
Q 018705 51 VNHPEDVSVVVSKGALYTATR-D------GWVKYFILHNETLV-NWKHI---DSQSLLGLTTTKDGGVILCDN------- 112 (351)
Q Consensus 51 ~~~pe~i~~d~~~g~lyv~~~-~------g~I~~~d~~~g~~~-~~~~~---~~~p~~gl~~d~~G~L~v~d~------- 112 (351)
...|..+...| +| +||+.. + |+|..+|.+++++. ++... ...++ .+.+.++++.+++..
T Consensus 137 ~s~Ph~~~~~p-dG-i~Vs~~g~~~g~~~g~v~vlD~~T~~v~~~~~~~~~~~~~~Y-d~~~~p~~~~mvsS~wg~p~~~ 213 (462)
T 2ece_A 137 YSRLHTVHCGP-DA-IYISALGNEEGEGPGGILMLDHYSFEPLGKWEIDRGDQYLAY-DFWWNLPNEVLVSSEWAVPNTI 213 (462)
T ss_dssp EEEEEEEEECS-SC-EEEEEEEETTSCSCCEEEEECTTTCCEEEECCSBCTTCCCCC-CEEEETTTTEEEECBCCCHHHH
T ss_pred CCcccceeECC-Ce-EEEEcCCCcCCCCCCeEEEEECCCCeEEEEEccCCCCccccc-eEEECCCCCEEEEccCcCcccc
Confidence 34788889985 45 777432 2 68999999888764 33322 12345 577788887655542
Q ss_pred -------------CCCeEEEcC-CC--eEEecCC-C-CCcccEEE--ccCC-cEEEEeC-CCccCCcccccccccccCCc
Q 018705 113 -------------EKGLLKVTE-EG--VEAIVPD-A-SFTNDVIA--ASDG-TLYFTVA-STKYTPTDFYKDMAEGKPYG 170 (351)
Q Consensus 113 -------------~~gl~~~~~-~g--~~~l~~~-~-~~~n~l~~--d~dG-~ly~t~~-~~~~~~~~~~~~~~~~~~~g 170 (351)
.+.+..++- ++ ...+..+ . ..|..|.+ +|+| ..|+++. +.+ .-.+
T Consensus 214 ~~g~~~~~~~~~~~d~V~v~D~~~~k~~~tI~vg~~g~~P~~i~f~~~Pdg~~aYV~~e~~~~-------------~Lss 280 (462)
T 2ece_A 214 EDGLKLEHLKDRYGNRIHFWDLRKRKRIHSLTLGEENRMALELRPLHDPTKLMGFINMVVSLK-------------DLSS 280 (462)
T ss_dssp TTCCCTTTHHHHSCCEEEEEETTTTEEEEEEESCTTEEEEEEEEECSSTTCCEEEEEEEEETT-------------TCCE
T ss_pred ccccchhhhhhccCCEEEEEECCCCcEeeEEecCCCCCccceeEeeECCCCCEEEEEEeeecc-------------CCCc
Confidence 345666663 44 4444332 1 46777766 8998 5788764 000 0123
Q ss_pred eEEEEeCCCCeEEEee-----c-----C-----------ccccceEEEcCCCCEEEEEecce----eEEeecCCCCce--
Q 018705 171 QLRKYDPKLKETTVLH-----E-----G-----------FYFANGIALSKNEDFVVVCESWK----RYWLKGDRAGIL-- 223 (351)
Q Consensus 171 ~l~~~d~~~~~~~~~~-----~-----~-----------~~~~ngi~~~~dg~~lyv~~~~~----~~~i~~~~~~~~-- 223 (351)
.|+.|..+.|+.+... . . ...|.+|.+|+||++||++.... .|.+.+....+.
T Consensus 281 ~V~v~~~d~g~~~~~~vIdi~~~~v~~~lp~~~~~f~~~~~~pa~I~lS~DGrfLYVSnrg~d~VavfdV~d~~~~~lv~ 360 (462)
T 2ece_A 281 SIWLWFYEDGKWNAEKVIEIPAEPLEGNLPEILKPFKAVPPLVTDIDISLDDKFLYLSLWGIGEVRQYDISNPFKPVLTG 360 (462)
T ss_dssp EEEEEEEETTEEEEEEEEEECCEECCSSCCGGGGGGTEECCCCCCEEECTTSCEEEEEETTTTEEEEEECSSTTSCEEEE
T ss_pred eEEEEEecCCceeEEEEEeCCCccccccccccccccccCCCceeEEEECCCCCEEEEEeCCCCEEEEEEecCCCCcEEEE
Confidence 4443322224332111 0 0 24578999999999999999876 455543211111
Q ss_pred eEEec------------cCCCCCCceEECCCCC-EEEEE
Q 018705 224 DAFIE------------NLPGGPDNINLAPDGS-FWIGL 249 (351)
Q Consensus 224 ~~~~~------------~~~g~pd~i~~d~~G~-lwva~ 249 (351)
.+... .+.+.|.++.++++|+ ||++.
T Consensus 361 ~I~tGG~~~~~~~~~G~~~~ggPr~~~lSpDGk~LyVaN 399 (462)
T 2ece_A 361 KVKLGGIFHRADHPAGHKLTGAPQMLEISRDGRRVYVTN 399 (462)
T ss_dssp EEECBTTTTCBCCTTSCCCCSCCCCEEECTTSSEEEEEC
T ss_pred EEEeCCeeccccccccccCCCCCCEEEEcCCCCEEEEEc
Confidence 11111 1224699999999996 88885
No 215
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=98.52 E-value=6.4e-05 Score=71.00 Aligned_cols=187 Identities=9% Similarity=0.051 Sum_probs=109.7
Q ss_pred eCCCeEEEEE-cCCEEEEEEcCCC----eEEEEe-------ecC-CccccceEEcCCCCEEEEeCC-------CCeEEEc
Q 018705 61 VSKGALYTAT-RDGWVKYFILHNE----TLVNWK-------HID-SQSLLGLTTTKDGGVILCDNE-------KGLLKVT 120 (351)
Q Consensus 61 ~~~g~lyv~~-~~g~I~~~d~~~g----~~~~~~-------~~~-~~p~~gl~~d~~G~L~v~d~~-------~gl~~~~ 120 (351)
.+...||+.. .+++|+.+|..+. ++.... ..+ .+|+ ++...++| +||+..+ ++++.++
T Consensus 93 ~~r~~l~v~~l~s~~I~viD~~t~p~~p~~~k~ie~~~~~~~~g~s~Ph-~~~~~pdG-i~Vs~~g~~~g~~~g~v~vlD 170 (462)
T 2ece_A 93 IERRFLIVPGLRSSRIYIIDTKPNPREPKIIKVIEPEEVKKVSGYSRLH-TVHCGPDA-IYISALGNEEGEGPGGILMLD 170 (462)
T ss_dssp CCSCEEEEEBTTTCCEEEEECCSCTTSCEEEEEECHHHHHHHHCEEEEE-EEEECSSC-EEEEEEEETTSCSCCEEEEEC
T ss_pred ccCCEEEEccCCCCeEEEEECCCCCCCceeeeeechhhcccccCCCccc-ceeECCCe-EEEEcCCCcCCCCCCeEEEEE
Confidence 3577888855 5788999997543 332222 112 3788 99999999 9996544 3688888
Q ss_pred C-CC--eEEecCC---CCCcccEEEccCCcEEEEe-CCCc--cCCcccccccccccCCceEEEEeCCCCeEEEeecC---
Q 018705 121 E-EG--VEAIVPD---ASFTNDVIAASDGTLYFTV-ASTK--YTPTDFYKDMAEGKPYGQLRKYDPKLKETTVLHEG--- 188 (351)
Q Consensus 121 ~-~g--~~~l~~~---~~~~n~l~~d~dG~ly~t~-~~~~--~~~~~~~~~~~~~~~~g~l~~~d~~~~~~~~~~~~--- 188 (351)
. ++ +..+... ..+++++-+.++++++++. .... +.. .+....+++....+|..||.++++......-
T Consensus 171 ~~T~~v~~~~~~~~~~~~~~Yd~~~~p~~~~mvsS~wg~p~~~~~-g~~~~~~~~~~~d~V~v~D~~~~k~~~tI~vg~~ 249 (462)
T 2ece_A 171 HYSFEPLGKWEIDRGDQYLAYDFWWNLPNEVLVSSEWAVPNTIED-GLKLEHLKDRYGNRIHFWDLRKRKRIHSLTLGEE 249 (462)
T ss_dssp TTTCCEEEECCSBCTTCCCCCCEEEETTTTEEEECBCCCHHHHTT-CCCTTTHHHHSCCEEEEEETTTTEEEEEEESCTT
T ss_pred CCCCeEEEEEccCCCCccccceEEECCCCCEEEEccCcCcccccc-ccchhhhhhccCCEEEEEECCCCcEeeEEecCCC
Confidence 5 45 5555422 2567788889998755544 2210 100 0111111113356899999887765433222
Q ss_pred ccccceEEE--cCCCCEEEEEec------ce---eEEeecCCCCceeEE-------eccC----------CCCCCceEEC
Q 018705 189 FYFANGIAL--SKNEDFVVVCES------WK---RYWLKGDRAGILDAF-------IENL----------PGGPDNINLA 240 (351)
Q Consensus 189 ~~~~ngi~~--~~dg~~lyv~~~------~~---~~~i~~~~~~~~~~~-------~~~~----------~g~pd~i~~d 240 (351)
...|.+|.+ +|+++++|++.. .+ .++.++........+ ...+ +..|.+|.++
T Consensus 250 g~~P~~i~f~~~Pdg~~aYV~~e~~~~~Lss~V~v~~~d~g~~~~~~vIdi~~~~v~~~lp~~~~~f~~~~~~pa~I~lS 329 (462)
T 2ece_A 250 NRMALELRPLHDPTKLMGFINMVVSLKDLSSSIWLWFYEDGKWNAEKVIEIPAEPLEGNLPEILKPFKAVPPLVTDIDIS 329 (462)
T ss_dssp EEEEEEEEECSSTTCCEEEEEEEEETTTCCEEEEEEEEETTEEEEEEEEEECCEECCSSCCGGGGGGTEECCCCCCEEEC
T ss_pred CCccceeEeeECCCCCEEEEEEeeeccCCCceEEEEEecCCceeEEEEEeCCCccccccccccccccccCCCceeEEEEC
Confidence 246778877 999999999654 33 222222100000110 0011 2467889999
Q ss_pred CCCC-EEEEEe
Q 018705 241 PDGS-FWIGLI 250 (351)
Q Consensus 241 ~~G~-lwva~~ 250 (351)
+||+ |||+.-
T Consensus 330 ~DGrfLYVSnr 340 (462)
T 2ece_A 330 LDDKFLYLSLW 340 (462)
T ss_dssp TTSCEEEEEET
T ss_pred CCCCEEEEEeC
Confidence 9996 899864
No 216
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=98.52 E-value=7.1e-05 Score=70.22 Aligned_cols=241 Identities=12% Similarity=0.141 Sum_probs=138.4
Q ss_pred CCCcCCCceEEEee-CCCeEEEEEcCCEEEEEEcCC---Ce----EEEEeecCCccccceEEcCCCCEEEEeCCCCeEEE
Q 018705 48 EGCVNHPEDVSVVV-SKGALYTATRDGWVKYFILHN---ET----LVNWKHIDSQSLLGLTTTKDGGVILCDNEKGLLKV 119 (351)
Q Consensus 48 ~~~~~~pe~i~~d~-~~g~lyv~~~~g~I~~~d~~~---g~----~~~~~~~~~~p~~gl~~d~~G~L~v~d~~~gl~~~ 119 (351)
.+.-..-.++++.+ ++..+.++..||.|..||..+ +. ...+ ....... .+++.++++++++....+.+++
T Consensus 60 ~~h~~~V~~~~~s~~~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~-~h~~~v~-~~~~~~~~~~l~s~s~dg~i~v 137 (437)
T 3gre_A 60 ENEPNSITSSAVSPGETPYLITGSDQGVIKIWNLKEIIVGEVYSSSLTY-DCSSTVT-QITMIPNFDAFAVSSKDGQIIV 137 (437)
T ss_dssp TTTTSCEEEEEEECSSSCEEEEEETTSEEEEEEHHHHHTTCCCSCSEEE-ECSSCEE-EEEECTTSSEEEEEETTSEEEE
T ss_pred cCCCCceEEEEECCCCCCEEEEecCCceEEEeECcccccCcccceeeec-cCCCCEE-EEEEeCCCCEEEEEeCCCEEEE
Confidence 44334567899997 667888899999999999754 32 1122 2334566 8999999986666555565555
Q ss_pred cC-----CC--eEEecCC------------CCCcccEE--EccCCcEEEEeCCCccCCcccccccccccCCceEEEEeCC
Q 018705 120 TE-----EG--VEAIVPD------------ASFTNDVI--AASDGTLYFTVASTKYTPTDFYKDMAEGKPYGQLRKYDPK 178 (351)
Q Consensus 120 ~~-----~g--~~~l~~~------------~~~~n~l~--~d~dG~ly~t~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~ 178 (351)
.. ++ ...+... ...+..+. ..+++.+.++.+. ++.|..||..
T Consensus 138 wd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-----------------d~~i~iwd~~ 200 (437)
T 3gre_A 138 LKVNHYQQESEVKFLNCECIRKINLKNFGKNEYAVRMRAFVNEEKSLLVALTN-----------------LSRVIIFDIR 200 (437)
T ss_dssp EEEEEEEETTEEEEEEEEEEEEEEGGGGSSCCCEEEEEEEECSSCEEEEEEET-----------------TSEEEEEETT
T ss_pred EEeccccCCceeeccccceeEEEEccCcccccCceEEEEEEcCCCCEEEEEeC-----------------CCeEEEEeCC
Confidence 41 33 2211110 01222222 3345555444432 5789999988
Q ss_pred CCeEEEeecC---ccccceEEEcCCCCEEEEEecce--eEEeecCCCCce-eEEeccCCCCCCce----EECCCCCEEEE
Q 018705 179 LKETTVLHEG---FYFANGIALSKNEDFVVVCESWK--RYWLKGDRAGIL-DAFIENLPGGPDNI----NLAPDGSFWIG 248 (351)
Q Consensus 179 ~~~~~~~~~~---~~~~ngi~~~~dg~~lyv~~~~~--~~~i~~~~~~~~-~~~~~~~~g~pd~i----~~d~~G~lwva 248 (351)
+++....... ......++++|+++.|+.+..++ ++| +...++. ..+..........+ .++++|.+.++
T Consensus 201 ~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~i~iw--d~~~~~~~~~~~~~~~~~v~~~~~~~~~s~~~~~l~s 278 (437)
T 3gre_A 201 TLERLQIIENSPRHGAVSSICIDEECCVLILGTTRGIIDIW--DIRFNVLIRSWSFGDHAPITHVEVCQFYGKNSVIVVG 278 (437)
T ss_dssp TCCEEEEEECCGGGCCEEEEEECTTSCEEEEEETTSCEEEE--ETTTTEEEEEEBCTTCEEEEEEEECTTTCTTEEEEEE
T ss_pred CCeeeEEEccCCCCCceEEEEECCCCCEEEEEcCCCeEEEE--EcCCccEEEEEecCCCCceEEEEeccccCCCccEEEE
Confidence 7765443332 34677899999999777777666 455 2222222 11110111111234 23355655554
Q ss_pred EecCCchhhhhhhcChhHHHHHHhccchhhcccCCCCCCceEEEEEECCCCeEEEEEECCCCC-----------------
Q 018705 249 LIKMNQTGVRAIQKCREKWELLDAYPGLISLLLPMGSDAGARVVKVDGNDGKIIRDFNDPDAT----------------- 311 (351)
Q Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~g~~~~~~~~~~g~----------------- 311 (351)
.. ..+.|..+|..+++.+..+....+.
T Consensus 279 ~~------------------------------------~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 322 (437)
T 3gre_A 279 GS------------------------------------SKTFLTIWNFVKGHCQYAFINSDEQPSMEHFLPIEKGLEELN 322 (437)
T ss_dssp ES------------------------------------TTEEEEEEETTTTEEEEEEESSSSCCCGGGGSCBCSSGGGCC
T ss_pred Ec------------------------------------CCCcEEEEEcCCCcEEEEEEcCCCCCccceecccccccccce
Confidence 32 2345777787567777777643211
Q ss_pred -----cccceeEEEEECCEEEEEecCCCeEEEEeCCCCC
Q 018705 312 -----YISFVTSAAEFDGNLYLASLQSNFIGILPLDGPE 345 (351)
Q Consensus 312 -----~~~~~~~~~~~~g~L~ig~~~~~~i~~~~~~~~~ 345 (351)
....++++...++++.+.....+.|..+++...+
T Consensus 323 ~~~~~~~~~v~~l~~~~~~~l~s~~~d~~i~~wd~~~~~ 361 (437)
T 3gre_A 323 FCGIRSLNALSTISVSNDKILLTDEATSSIVMFSLNELS 361 (437)
T ss_dssp CCCCCSGGGGCCEEEETTEEEEEEGGGTEEEEEETTCGG
T ss_pred ecccccCCceEEEEECCceEEEecCCCCeEEEEECCCcc
Confidence 1233666666677766666667889999987654
No 217
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=98.50 E-value=1.1e-05 Score=79.22 Aligned_cols=173 Identities=15% Similarity=0.110 Sum_probs=100.0
Q ss_pred CceEEEeeCCCeEEE-EEcCCEEEEEEcCCCeEEEEeecC-CccccceEEcCCCCEEEEeC--CC---CeEEEcC--CC-
Q 018705 54 PEDVSVVVSKGALYT-ATRDGWVKYFILHNETLVNWKHID-SQSLLGLTTTKDGGVILCDN--EK---GLLKVTE--EG- 123 (351)
Q Consensus 54 pe~i~~d~~~g~lyv-~~~~g~I~~~d~~~g~~~~~~~~~-~~p~~gl~~d~~G~L~v~d~--~~---gl~~~~~--~g- 123 (351)
-.++++++++..+.. +..+|.+..|+.++++.+.+.... .... .++++++..+|.++. +. .++.++. +|
T Consensus 24 ~~~~~~~~DG~~la~~s~~~g~~~lw~~~~g~~~~lt~~~~~~~~-~~~~spd~~l~~~~~~~g~~~~~l~~~~~~~~g~ 102 (582)
T 3o4h_A 24 KYSLQGVVDGDKLLVVGFSEGSVNAYLYDGGETVKLNREPINSVL-DPHYGVGRVILVRDVSKGAEQHALFKVNTSRPGE 102 (582)
T ss_dssp EEEEEEEETTTEEEEEEEETTEEEEEEEETTEEEECCSSCCSEEC-EECTTCSEEEEEEECSTTSCCEEEEEEETTSTTC
T ss_pred hheeecCCCCCeEEEEEccCCceeEEEEcCCCcEeeecccccccc-cccCCCCeEEEEeccCCCCcceEEEEEeccCCCc
Confidence 357888887777654 445887766666577766654433 2344 677777733455553 12 3555555 66
Q ss_pred eEEecCCCCCcccEEEccCC-cEEEEeCCCccCCcccccccccccCCceEEEEeCCCCeEEEeecCccccceEEEcCCCC
Q 018705 124 VEAIVPDASFTNDVIAASDG-TLYFTVASTKYTPTDFYKDMAEGKPYGQLRKYDPKLKETTVLHEGFYFANGIALSKNED 202 (351)
Q Consensus 124 ~~~l~~~~~~~n~l~~d~dG-~ly~t~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~~~~~~~~~~~~~~ngi~~~~dg~ 202 (351)
...+... ......++++|| .++++... .+.+..||.++++.+.+..... +.+++||||+
T Consensus 103 ~~~l~~~-~~~~~~~~s~dg~~~~~~s~~-----------------~~~~~l~d~~~g~~~~l~~~~~--~~~~~spDG~ 162 (582)
T 3o4h_A 103 EQRLEAV-KPMRILSGVDTGEAVVFTGAT-----------------EDRVALYALDGGGLRELARLPG--FGFVSDIRGD 162 (582)
T ss_dssp CEECTTS-CSBEEEEEEECSSCEEEEEEC-----------------SSCEEEEEEETTEEEEEEEESS--CEEEEEEETT
T ss_pred cccccCC-CCceeeeeCCCCCeEEEEecC-----------------CCCceEEEccCCcEEEeecCCC--ceEEECCCCC
Confidence 4444332 234455777777 34444322 1345577877787766654322 7899999999
Q ss_pred EEEEEecc----eeEEeecCCCCceeEEeccCCCCCCceEECCCCCEEEE
Q 018705 203 FVVVCESW----KRYWLKGDRAGILDAFIENLPGGPDNINLAPDGSFWIG 248 (351)
Q Consensus 203 ~lyv~~~~----~~~~i~~~~~~~~~~~~~~~~g~pd~i~~d~~G~lwva 248 (351)
.|+++... ..+++-+...++.+.+.. ..+....+++++||+..++
T Consensus 163 ~la~~~~~~~~~~~i~~~d~~~g~~~~l~~-~~~~~~~~~~SpDG~~l~~ 211 (582)
T 3o4h_A 163 LIAGLGFFGGGRVSLFTSNLSSGGLRVFDS-GEGSFSSASISPGMKVTAG 211 (582)
T ss_dssp EEEEEEEEETTEEEEEEEETTTCCCEEECC-SSCEEEEEEECTTSCEEEE
T ss_pred EEEEEEEcCCCCeEEEEEcCCCCCceEeec-CCCccccceECCCCCEEEE
Confidence 88765544 244444433444444432 2233356788999975443
No 218
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=98.50 E-value=1.3e-05 Score=72.62 Aligned_cols=179 Identities=9% Similarity=0.027 Sum_probs=104.9
Q ss_pred CCceEEEeeC---CCeEEEEEcCCEEEEEEcCCCe--EEEEeecCCccccce------EEcCCCCEEEEeCCCCeEEEc-
Q 018705 53 HPEDVSVVVS---KGALYTATRDGWVKYFILHNET--LVNWKHIDSQSLLGL------TTTKDGGVILCDNEKGLLKVT- 120 (351)
Q Consensus 53 ~pe~i~~d~~---~g~lyv~~~~g~I~~~d~~~g~--~~~~~~~~~~p~~gl------~~d~~G~L~v~d~~~gl~~~~- 120 (351)
...++++.++ +..++++..+|.|..||..+++ ...+........ .+ +++++++++++....+.+++.
T Consensus 67 ~v~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~-~~~~~~~~~~s~~~~~l~~~~~d~~i~vwd 145 (357)
T 3i2n_A 67 PIKCGTFGATSLQQRYLATGDFGGNLHIWNLEAPEMPVYSVKGHKEIIN-AIDGIGGLGIGEGAPEIVTGSRDGTVKVWD 145 (357)
T ss_dssp CEEEEECTTCCTTTCCEEEEETTSCEEEECTTSCSSCSEEECCCSSCEE-EEEEESGGGCC-CCCEEEEEETTSCEEEEC
T ss_pred cEEEEEEcCCCCCCceEEEecCCCeEEEEeCCCCCccEEEEEecccceE-EEeeccccccCCCccEEEEEeCCCeEEEEe
Confidence 3467888866 4778899999999999987665 334333333344 55 346788766655555555554
Q ss_pred -CCC---eEEecCCC----CCcccEE----EccCCcEEEEeCCCccCCcccccccccccCCceEEEEeCCCCeEEEeecC
Q 018705 121 -EEG---VEAIVPDA----SFTNDVI----AASDGTLYFTVASTKYTPTDFYKDMAEGKPYGQLRKYDPKLKETTVLHEG 188 (351)
Q Consensus 121 -~~g---~~~l~~~~----~~~n~l~----~d~dG~ly~t~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~~~~~~~~~~ 188 (351)
.++ ...+.... ..+.+++ ++++|.+.++... +|.|..||..+++.......
T Consensus 146 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~-----------------d~~i~i~d~~~~~~~~~~~~ 208 (357)
T 3i2n_A 146 PRQKDDPVANMEPVQGENKRDCWTVAFGNAYNQEERVVCAGYD-----------------NGDIKLFDLRNMALRWETNI 208 (357)
T ss_dssp TTSCSSCSEEECCCTTSCCCCEEEEEEECCCC-CCCEEEEEET-----------------TSEEEEEETTTTEEEEEEEC
T ss_pred CCCCCCcceeccccCCCCCCceEEEEEEeccCCCCCEEEEEcc-----------------CCeEEEEECccCceeeecCC
Confidence 222 44443221 2455666 5678876666543 46899999988876554444
Q ss_pred ccccceEEEcC---CCCEEEEEecce--eEE-eecC-CCCceeEEe-ccCCCCCCceEECCCCC-EEEEE
Q 018705 189 FYFANGIALSK---NEDFVVVCESWK--RYW-LKGD-RAGILDAFI-ENLPGGPDNINLAPDGS-FWIGL 249 (351)
Q Consensus 189 ~~~~ngi~~~~---dg~~lyv~~~~~--~~~-i~~~-~~~~~~~~~-~~~~g~pd~i~~d~~G~-lwva~ 249 (351)
......++++| +++.++++..++ ++| +... ......... ....+....+++.++|. +.++.
T Consensus 209 ~~~v~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~ 278 (357)
T 3i2n_A 209 KNGVCSLEFDRKDISMNKLVATSLEGKFHVFDMRTQHPTKGFASVSEKAHKSTVWQVRHLPQNRELFLTA 278 (357)
T ss_dssp SSCEEEEEESCSSSSCCEEEEEESTTEEEEEEEEEEETTTEEEEEEEECCSSCEEEEEEETTEEEEEEEE
T ss_pred CCceEEEEcCCCCCCCCEEEEECCCCeEEEEeCcCCCcccceeeeccCCCcCCEEEEEECCCCCcEEEEE
Confidence 45677899999 888777776665 333 2221 111111110 01222335577888887 44443
No 219
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=98.49 E-value=4.2e-05 Score=69.02 Aligned_cols=224 Identities=11% Similarity=0.093 Sum_probs=133.8
Q ss_pred CceEecCCCcCCCceEEEeeCCCeE-EEEEcC-------------CEEEEEEcCCCeEEEEeecCCccccceEEcCCC-C
Q 018705 42 GLTKLGEGCVNHPEDVSVVVSKGAL-YTATRD-------------GWVKYFILHNETLVNWKHIDSQSLLGLTTTKDG-G 106 (351)
Q Consensus 42 ~~~~i~~~~~~~pe~i~~d~~~g~l-yv~~~~-------------g~I~~~d~~~g~~~~~~~~~~~p~~gl~~d~~G-~ 106 (351)
..++|..+ .+..|..+ ++.+ |+...+ ..|++++.++++.+.+... + +.++..+| .
T Consensus 48 ~~~~l~~~---~~~~i~~~--g~~Iyy~~~~~~~~~~~~~~~~n~~~Iy~i~~dg~~~~~l~~~---~--~~~~s~~g~~ 117 (302)
T 3s25_A 48 NIHKLSND---TAMYINAD--KNYVYYVRNNNQKITSQTFFSYDRNSLCRIKRNGHGSTVLDPD---P--CIYASLIGNY 117 (302)
T ss_dssp SCEEEEEE---EEEEEEEC--SSEEEEEEECC------CCSSCCSEEEEEEETTSCCCEEEECS---C--EEEEEEETTE
T ss_pred CCEEccCC---ceeeEEEc--CCEEEEEECCCCcccccceeccCCCeEEEEeCCCCcceEeecC---C--ccEEEEeCCE
Confidence 34555443 24455554 6655 455543 4799999866654444321 1 33444444 6
Q ss_pred EEEEe----CCCCeEEEcCCC--eEEecCCCCCcccEEEccCC-cEEEEeCCCccCCcccccccccccCCceEEEEeCCC
Q 018705 107 VILCD----NEKGLLKVTEEG--VEAIVPDASFTNDVIAASDG-TLYFTVASTKYTPTDFYKDMAEGKPYGQLRKYDPKL 179 (351)
Q Consensus 107 L~v~d----~~~gl~~~~~~g--~~~l~~~~~~~n~l~~d~dG-~ly~t~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~ 179 (351)
||.++ ....|++++.+| .+.+..... .+++++| .||+++.. ...|++.+.++
T Consensus 118 Iy~~~~~~~~~~~Iy~~~~dGs~~~~lt~~~~----~~~~~~g~~iy~t~~g-----------------~~~Iy~~~l~g 176 (302)
T 3s25_A 118 IYYLHYDTQTATSLYRIRIDGEEKKKIKNHYL----FTCNTSDRYFYYNNPK-----------------NGQLYRYDTAS 176 (302)
T ss_dssp EEEEEESSSSCEEEEEEETTSCCCEEEESSCC----CCSEEETTEEEEECTT-----------------TCCEEEEETTT
T ss_pred EEEEeecCCCCceEEEEECCCCCeEEEeCCCc----eEeeEECCEEEEEeCC-----------------CceEEEEECCC
Confidence 88877 234678887666 565654422 3456766 79999863 34799999887
Q ss_pred CeEEEeecCccccceEEEcCCCCEEEEEecce--eEEeecCCCCceeEEeccCCCCCCceEECCCCC-EEEEEecCCchh
Q 018705 180 KETTVLHEGFYFANGIALSKNEDFVVVCESWK--RYWLKGDRAGILDAFIENLPGGPDNINLAPDGS-FWIGLIKMNQTG 256 (351)
Q Consensus 180 ~~~~~~~~~~~~~ngi~~~~dg~~lyv~~~~~--~~~i~~~~~~~~~~~~~~~~g~pd~i~~d~~G~-lwva~~~~~~~~ 256 (351)
+..+.+..+ +..+.++|+++.||+++... ++...+...+..+.+.+. .. ..+|++|. ||-+...
T Consensus 177 ~~~~~l~~~---~~~~~~~P~g~~iy~t~~~~~~~I~~~~ldG~~~~~Lt~~--~~---~~~~~~g~~Iy~~~~~----- 243 (302)
T 3s25_A 177 QSEALFYDC---NCYKPVVLDDTNVYYMDVNRDNAIVHVNINNPNPVVLTEA--NI---EHYNVYGSLIFYQRGG----- 243 (302)
T ss_dssp TEEEEEECS---CEEEEEEEETTEEEEEEGGGTTEEEEECSSSCCCEECSCS--CE---EEEEEETTEEEEEECS-----
T ss_pred CCEEEEeCC---CccceeeecCCEEEEEEcCCCcEEEEEECCCCCeEEEeCC--Cc---ceEEECCCEEEEEECC-----
Confidence 776666543 22345778999999988654 444333222333444321 11 23555564 5443221
Q ss_pred hhhhhcChhHHHHHHhccchhhcccCCCCCCceEEEEEECCCCeEEEEEECCCCCcccceeEEEEECCEEEEEecCCCeE
Q 018705 257 VRAIQKCREKWELLDAYPGLISLLLPMGSDAGARVVKVDGNDGKIIRDFNDPDATYISFVTSAAEFDGNLYLASLQSNFI 336 (351)
Q Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~g~~~~~~~~~~g~~~~~~~~~~~~~g~L~ig~~~~~~i 336 (351)
....+.+++. +|...+.+...+ +.++...++.||........|
T Consensus 244 ------------------------------~~~~i~~~~~-DG~~r~~l~~~~------~~~i~i~~d~Iy~td~~~~~i 286 (302)
T 3s25_A 244 ------------------------------DNPALCVVKN-DGTGFKELAKGE------FCNINVTSQYVYFTDFVSNKE 286 (302)
T ss_dssp ------------------------------SSCEEEEEET-TSCCCEEEEESC------EEEEEECSSEEEEEETTTCCE
T ss_pred ------------------------------CCcEEEEEEC-CCCccEEeeCCc------cceEEEeCCEEEEEECCCCeE
Confidence 0136888898 886555554211 335667899999999888889
Q ss_pred EEEeCCCCCC
Q 018705 337 GILPLDGPEP 346 (351)
Q Consensus 337 ~~~~~~~~~~ 346 (351)
.++++.++.-
T Consensus 287 ~~~~~dGs~~ 296 (302)
T 3s25_A 287 YCTSTQNPDT 296 (302)
T ss_dssp EEEESSSCCS
T ss_pred EEEECCCCCc
Confidence 9999888753
No 220
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=98.49 E-value=3.4e-06 Score=82.23 Aligned_cols=189 Identities=12% Similarity=0.048 Sum_probs=111.1
Q ss_pred CCCeEEEEEc-CCEEEEEEcCCCeEEEEee--cCCccccceEEc--CCC-CEEEEeCC-----------------CC-eE
Q 018705 62 SKGALYTATR-DGWVKYFILHNETLVNWKH--IDSQSLLGLTTT--KDG-GVILCDNE-----------------KG-LL 117 (351)
Q Consensus 62 ~~g~lyv~~~-~g~I~~~d~~~g~~~~~~~--~~~~p~~gl~~d--~~G-~L~v~d~~-----------------~g-l~ 117 (351)
++..+|+... +++|.++|.++.+...+.. .+..|. |+++. +++ .+|++... .+ +-
T Consensus 100 DG~~lfVnd~~~~rVavIdl~t~~~~~ii~ip~g~~ph-g~~~~~~p~~~~v~~~~~~~~p~~~dg~~l~~~~~~~~~vt 178 (595)
T 1fwx_A 100 DGRFLFMNDKANTRVARVRCDVMKCDAILEIPNAKGIH-GLRPQKWPRSNYVFCNGEDETPLVNDGTNMEDVANYVNVFT 178 (595)
T ss_dssp EEEEEEEEETTTTEEEEEETTTTEEEEEEECSSCCSEE-EEEECCSSBCSEEEEEECSCEESSCSSSSTTCGGGEEEEEE
T ss_pred CCCEEEEEcCCCCEEEEEECCCceEeeEEeCCCCCCCc-ceeeeecCCCcEEEEecccccccCCCCcccccccccCceEE
Confidence 4678898664 6789999998887654333 245689 99984 677 56776411 11 33
Q ss_pred EEcC-CC--eEEecCCCCCcccEEEccCC-cEEEEeCCCccC---------Ccccc--c------c-ccccc--CCceEE
Q 018705 118 KVTE-EG--VEAIVPDASFTNDVIAASDG-TLYFTVASTKYT---------PTDFY--K------D-MAEGK--PYGQLR 173 (351)
Q Consensus 118 ~~~~-~g--~~~l~~~~~~~n~l~~d~dG-~ly~t~~~~~~~---------~~~~~--~------~-~~~~~--~~g~l~ 173 (351)
.++. +. ..++..+ ..|..+++++|| .+|+|+..+.-. ..++. . . +-.+. .-+.|.
T Consensus 179 vID~~t~~v~~qI~Vg-g~pd~~~~spdGk~~~vt~~~se~~~~i~~~~~~~~d~v~V~~~~~~~~~v~~Gk~~~i~~V~ 257 (595)
T 1fwx_A 179 AVDADKWEVAWQVLVS-GNLDNCDADYEGKWAFSTSYNSEKGMTLPEMTAAEMDHIVVFNIAEIEKAIAAGDYQELNGVK 257 (595)
T ss_dssp EEETTTTEEEEEEEES-SCCCCEEECSSSSEEEEEESCTTCCSSHHHHTCCSEEEEEEEEHHHHHHHHHHTCSEEETTEE
T ss_pred EEECCCCeEEEEEEeC-CCccceEECCCCCEEEEEecCcccCcchhhccccccceEEEeeccceeEeccCCCeeEECcEE
Confidence 3332 22 2222222 479999999998 577777432110 00000 0 0 00010 024588
Q ss_pred EEeCCC--CeE-EEeecCccccceEEEcCCCCEEEEEecce----eEEeecC------CCC-ceeEEec-cCCCCCCceE
Q 018705 174 KYDPKL--KET-TVLHEGFYFANGIALSKNEDFVVVCESWK----RYWLKGD------RAG-ILDAFIE-NLPGGPDNIN 238 (351)
Q Consensus 174 ~~d~~~--~~~-~~~~~~~~~~ngi~~~~dg~~lyv~~~~~----~~~i~~~------~~~-~~~~~~~-~~~g~pd~i~ 238 (351)
.+|..+ ++. .........|.|+.++|||+++|+++... .|.+... +.. +..+... .....|..++
T Consensus 258 VID~~~~~~~~~~~~Ipvg~~PhGv~~sPDGk~v~V~~~~s~~VsVid~~~~~~~~~~~l~~~~~v~~~v~vG~gP~h~a 337 (595)
T 1fwx_A 258 VVDGRKEASSLFTRYIPIANNPHGCNMAPDKKHLCVAGKLSPTVTVLDVTRFDAVFYENADPRSAVVAEPELGLGPLHTA 337 (595)
T ss_dssp EEECSGGGCCSSEEEEEEESSCCCEEECTTSSEEEEECTTSSBEEEEEGGGHHHHHHSCCCGGGGEEECCBCCSCEEEEE
T ss_pred EEeCcccCCceeEEEEecCCCceEEEEcCCCCEEEEeCCCCCeEEEEECcccccccccccCcccceEEEcCCCCCcceEE
Confidence 999886 333 22333346899999999999999988665 3333311 000 1112222 2223588999
Q ss_pred ECCCCCEEEEEecC
Q 018705 239 LAPDGSFWIGLIKM 252 (351)
Q Consensus 239 ~d~~G~lwva~~~~ 252 (351)
+|++|++|++....
T Consensus 338 F~~dG~aY~t~~ld 351 (595)
T 1fwx_A 338 FDGRGNAYTSLFLD 351 (595)
T ss_dssp ECTTSEEEEEETTT
T ss_pred ECCCCeEEEEEecC
Confidence 99999999998653
No 221
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=98.49 E-value=1e-05 Score=76.45 Aligned_cols=179 Identities=10% Similarity=0.101 Sum_probs=109.8
Q ss_pred CceEEEeeCC-CeEEEEEcCCEEEEEEcCCCeEEEEe---ecCCccccceEEcC-CCCEEEEeCCCCeEEEcC--CC-eE
Q 018705 54 PEDVSVVVSK-GALYTATRDGWVKYFILHNETLVNWK---HIDSQSLLGLTTTK-DGGVILCDNEKGLLKVTE--EG-VE 125 (351)
Q Consensus 54 pe~i~~d~~~-g~lyv~~~~g~I~~~d~~~g~~~~~~---~~~~~p~~gl~~d~-~G~L~v~d~~~gl~~~~~--~g-~~ 125 (351)
-.+|+|.|.+ ..|.+|..||.|..||..+++..... ...+... +|++.+ +++++++....+.++++. .+ .+
T Consensus 122 V~~l~~~P~~~~~lasGs~dg~i~lWd~~~~~~~~~~~~~gH~~~V~-~l~f~p~~~~~l~s~s~D~~v~iwd~~~~~~~ 200 (435)
T 4e54_B 122 ATSLAWHPTHPSTVAVGSKGGDIMLWNFGIKDKPTFIKGIGAGGSIT-GLKFNPLNTNQFYASSMEGTTRLQDFKGNILR 200 (435)
T ss_dssp EEEEEECSSCTTCEEEEETTSCEEEECSSCCSCCEEECCCSSSCCCC-EEEECSSCTTEEEEECSSSCEEEEETTSCEEE
T ss_pred EEEEEEeCCCCCEEEEEeCCCEEEEEECCCCCceeEEEccCCCCCEE-EEEEeCCCCCEEEEEeCCCEEEEeeccCCcee
Confidence 4589998755 46788999999999998665432222 2234456 999996 677777766677777773 34 44
Q ss_pred EecCCC---CCcccEEEccCCcEEEEeCCCccCCcccccccccccCCceEEEEeCCCCeEEEeecCccccceEEEcCCCC
Q 018705 126 AIVPDA---SFTNDVIAASDGTLYFTVASTKYTPTDFYKDMAEGKPYGQLRKYDPKLKETTVLHEGFYFANGIALSKNED 202 (351)
Q Consensus 126 ~l~~~~---~~~n~l~~d~dG~ly~t~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~~~~~~~~~~~~~~ngi~~~~dg~ 202 (351)
.+.... .....++++++|.+.++.+. +|.|..||..++.+..+...-...++|+++|++.
T Consensus 201 ~~~~~~~~~~~~~~~~~~~~~~~l~~g~~-----------------dg~i~~wd~~~~~~~~~~~h~~~v~~v~~~p~~~ 263 (435)
T 4e54_B 201 VFASSDTINIWFCSLDVSASSRMVVTGDN-----------------VGNVILLNMDGKELWNLRMHKKKVTHVALNPCCD 263 (435)
T ss_dssp EEECCSSCSCCCCCEEEETTTTEEEEECS-----------------SSBEEEEESSSCBCCCSBCCSSCEEEEEECTTCS
T ss_pred EEeccCCCCccEEEEEECCCCCEEEEEeC-----------------CCcEeeeccCcceeEEEecccceEEeeeecCCCc
Confidence 443321 45678899999987776554 5679999987655443333334567899999987
Q ss_pred EEE-EEecce--eEEe-ecCCCCceeEEe-ccCCCCCCceEECCCCCEEEEEec
Q 018705 203 FVV-VCESWK--RYWL-KGDRAGILDAFI-ENLPGGPDNINLAPDGSFWIGLIK 251 (351)
Q Consensus 203 ~ly-v~~~~~--~~~i-~~~~~~~~~~~~-~~~~g~pd~i~~d~~G~lwva~~~ 251 (351)
.++ .+..++ ++|- .... ....... .........++++++|++.++...
T Consensus 264 ~~~~s~s~d~~v~iwd~~~~~-~~~~~~~~~~h~~~v~~~~~spdg~~l~s~~~ 316 (435)
T 4e54_B 264 WFLATASVDQTVKIWDLRQVR-GKASFLYSLPHRHPVNAACFSPDGARLLTTDQ 316 (435)
T ss_dssp SEEEEEETTSBCCEEETTTCC-SSSCCSBCCBCSSCEEECCBCTTSSEEEEEES
T ss_pred eEEEEecCcceeeEEeccccc-ccceEEEeeeccccccceeECCCCCeeEEEcC
Confidence 444 444444 5652 2111 1111111 011112245678888886666543
No 222
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=98.48 E-value=6.9e-05 Score=67.88 Aligned_cols=110 Identities=10% Similarity=-0.001 Sum_probs=74.6
Q ss_pred CCceEEEeeC----CCeEEEEEcCCEEEEEEcCCCeEE-EEeecCCccccceEEcC-CCCEEEEeCCCCeEEEc--CCC-
Q 018705 53 HPEDVSVVVS----KGALYTATRDGWVKYFILHNETLV-NWKHIDSQSLLGLTTTK-DGGVILCDNEKGLLKVT--EEG- 123 (351)
Q Consensus 53 ~pe~i~~d~~----~g~lyv~~~~g~I~~~d~~~g~~~-~~~~~~~~p~~gl~~d~-~G~L~v~d~~~gl~~~~--~~g- 123 (351)
...++++.++ +..++++..+|.|..||..+++.. .+........ .+++.+ +++++++....+.+++. .++
T Consensus 71 ~v~~~~~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~i~-~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~ 149 (366)
T 3k26_A 71 NFYTCAWTYDSNTSHPLLAVAGSRGIIRIINPITMQCIKHYVGHGNAIN-ELKFHPRDPNLLLSVSKDHALRLWNIQTDT 149 (366)
T ss_dssp CEEEEEEEECTTTCCEEEEEEETTCEEEEECTTTCCEEEEEESCCSCEE-EEEECSSCTTEEEEEETTSCEEEEETTTTE
T ss_pred cEEEEEeccCCCCCCCEEEEecCCCEEEEEEchhceEeeeecCCCCcEE-EEEECCCCCCEEEEEeCCCeEEEEEeecCe
Confidence 3467888876 346888999999999998777653 3333445566 899998 88776665555555555 355
Q ss_pred -eEEec---CCCCCcccEEEccCCcEEEEeCCCccCCcccccccccccCCceEEEEeCCCC
Q 018705 124 -VEAIV---PDASFTNDVIAASDGTLYFTVASTKYTPTDFYKDMAEGKPYGQLRKYDPKLK 180 (351)
Q Consensus 124 -~~~l~---~~~~~~n~l~~d~dG~ly~t~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~~ 180 (351)
...+. .....+.+++++++|...++.+. +|.|..||..++
T Consensus 150 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-----------------dg~i~i~d~~~~ 193 (366)
T 3k26_A 150 LVAIFGGVEGHRDEVLSADYDLLGEKIMSCGM-----------------DHSLKLWRINSK 193 (366)
T ss_dssp EEEEECSTTSCSSCEEEEEECTTSSEEEEEET-----------------TSCEEEEESCSH
T ss_pred EEEEecccccccCceeEEEECCCCCEEEEecC-----------------CCCEEEEECCCC
Confidence 44442 22367899999999977666543 356777776644
No 223
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=98.48 E-value=2.9e-05 Score=73.25 Aligned_cols=180 Identities=12% Similarity=0.092 Sum_probs=108.1
Q ss_pred CCCceEEEeeCC-CeEEEEEcCCEEEEEEcCC----------C-eEEEEeecCCccccceEEcCCCC-EEEEeCCCCeEE
Q 018705 52 NHPEDVSVVVSK-GALYTATRDGWVKYFILHN----------E-TLVNWKHIDSQSLLGLTTTKDGG-VILCDNEKGLLK 118 (351)
Q Consensus 52 ~~pe~i~~d~~~-g~lyv~~~~g~I~~~d~~~----------g-~~~~~~~~~~~p~~gl~~d~~G~-L~v~d~~~gl~~ 118 (351)
..+.++++.|++ ..++++..+|.|..|+..+ . ....+......+. ++++++++. ++++....|.++
T Consensus 129 ~~v~~l~~~p~~~~~lat~~~dg~V~vwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~-~l~~~~~~~~~l~s~~~dg~i~ 207 (430)
T 2xyi_A 129 GEVNRARYMPQNACVIATKTPSSDVLVFDYTKHPSKPEPSGECQPDLRLRGHQKEGY-GLSWNPNLNGYLLSASDDHTIC 207 (430)
T ss_dssp SCCSEEEEETTEEEEEEEECSSSCEEEEEGGGSCSSCCTTCCCCCSEEEECCSSCCC-CEEECTTSTTEEEEECTTSCEE
T ss_pred CcEEEEEECCCCCcEEEEECCCCcEEEEECCCcccccCccccCCCcEEecCCCCCeE-EEEeCCCCCCeEEEEeCCCeEE
Confidence 457899999753 4667788899999999754 1 1233333445567 999999886 666655556555
Q ss_pred Ec--CCC----e-----EEecCCCCCcccEEEcc-CCcEEEEeCCCccCCcccccccccccCCceEEEEeCCCCe----E
Q 018705 119 VT--EEG----V-----EAIVPDASFTNDVIAAS-DGTLYFTVASTKYTPTDFYKDMAEGKPYGQLRKYDPKLKE----T 182 (351)
Q Consensus 119 ~~--~~g----~-----~~l~~~~~~~n~l~~d~-dG~ly~t~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~~~----~ 182 (351)
+. ..+ . ..+......++++++++ ++.++++.+. .|.|..||..++. .
T Consensus 208 vwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~-----------------dg~i~i~d~~~~~~~~~~ 270 (430)
T 2xyi_A 208 LWDINATPKEHRVIDAKNIFTGHTAVVEDVAWHLLHESLFGSVAD-----------------DQKLMIWDTRNNNTSKPS 270 (430)
T ss_dssp EEETTSCCBGGGEEECSEEECCCSSCEEEEEECSSCTTEEEEEET-----------------TSEEEEEETTCSCSSSCS
T ss_pred EEeCCCCCCCCceeccceeecCCCCCEeeeEEeCCCCCEEEEEeC-----------------CCeEEEEECCCCCCCcce
Confidence 54 231 1 12222225688999999 5677777654 5689999877542 2
Q ss_pred EEeecCccccceEEEcCCCCE-EEEEecce--eEEeecCCCCceeEEeccCCCCCCceEECCCCC-EEEEEe
Q 018705 183 TVLHEGFYFANGIALSKNEDF-VVVCESWK--RYWLKGDRAGILDAFIENLPGGPDNINLAPDGS-FWIGLI 250 (351)
Q Consensus 183 ~~~~~~~~~~ngi~~~~dg~~-lyv~~~~~--~~~i~~~~~~~~~~~~~~~~g~pd~i~~d~~G~-lwva~~ 250 (351)
..+......++.|+++|++.. +..+...+ ++|--.........+. ...+....+.+.++|. ++++..
T Consensus 271 ~~~~~~~~~v~~i~~~p~~~~~l~tg~~dg~v~vwd~~~~~~~~~~~~-~h~~~v~~i~~sp~~~~~l~s~~ 341 (430)
T 2xyi_A 271 HTVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFE-SHKDEIFQVQWSPHNETILASSG 341 (430)
T ss_dssp EEEECCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCTTSCSEEEE-CCSSCEEEEEECSSCTTEEEEEE
T ss_pred eEeecCCCCeEEEEeCCCCCCEEEEEeCCCeEEEEeCCCCCCCeEEee-cCCCCEEEEEECCCCCCEEEEEe
Confidence 233333456789999999874 44555555 4442111111122232 2223345678888885 555544
No 224
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=98.47 E-value=0.00016 Score=65.72 Aligned_cols=180 Identities=15% Similarity=0.139 Sum_probs=107.3
Q ss_pred CCCceEEEeeCCCeEEEEEcCCEEEEEEcCCCeEE---EEeecCCccccceEEcCC--CCEEEEeCCCCeEEEc--CCC-
Q 018705 52 NHPEDVSVVVSKGALYTATRDGWVKYFILHNETLV---NWKHIDSQSLLGLTTTKD--GGVILCDNEKGLLKVT--EEG- 123 (351)
Q Consensus 52 ~~pe~i~~d~~~g~lyv~~~~g~I~~~d~~~g~~~---~~~~~~~~p~~gl~~d~~--G~L~v~d~~~gl~~~~--~~g- 123 (351)
..-.++++++++..+.++..+|.|..|+..++..+ .+........ .+++.++ ++++++....+.++++ .++
T Consensus 12 ~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h~~~v~-~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~ 90 (379)
T 3jrp_A 12 ELIHDAVLDYYGKRLATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVW-RVDWAHPKFGTILASCSYDGKVLIWKEENGR 90 (379)
T ss_dssp CCEEEEEECSSSSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEE-EEEECCGGGCSEEEEEETTSCEEEEEEETTE
T ss_pred ccEEEEEEcCCCCEEEEEECCCcEEEEecCCCcceeeeEecCCCCcEE-EEEeCCCCCCCEEEEeccCCEEEEEEcCCCc
Confidence 34568899987778888999999999987543332 2222334455 8888765 7766655555655655 244
Q ss_pred eEE---ecCCCCCcccEEEccC--CcEEEEeCCCccCCcccccccccccCCceEEEEeCCCCe---EEEeecCccccceE
Q 018705 124 VEA---IVPDASFTNDVIAASD--GTLYFTVASTKYTPTDFYKDMAEGKPYGQLRKYDPKLKE---TTVLHEGFYFANGI 195 (351)
Q Consensus 124 ~~~---l~~~~~~~n~l~~d~d--G~ly~t~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~~~---~~~~~~~~~~~ngi 195 (351)
... +......+.+++++++ |.+.++.+. ++.|..||..+++ ...+.........+
T Consensus 91 ~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~-----------------d~~i~v~d~~~~~~~~~~~~~~~~~~v~~~ 153 (379)
T 3jrp_A 91 WSQIAVHAVHSASVNSVQWAPHEYGPLLLVASS-----------------DGKVSVVEFKENGTTSPIIIDAHAIGVNSA 153 (379)
T ss_dssp EEEEEEECCCSSCEEEEEECCGGGCSEEEEEET-----------------TSEEEEEECCTTSCCCEEEEECCTTCEEEE
T ss_pred eeEeeeecCCCcceEEEEeCCCCCCCEEEEecC-----------------CCcEEEEecCCCCceeeEEecCCCCceEEE
Confidence 222 2222367889999998 876666543 4678888876552 22222333456788
Q ss_pred EEcC-------------CCCEEEEEecce--eEE-eecCCCCceeEE--eccCCCCCCceEECCC---CCEEEEEe
Q 018705 196 ALSK-------------NEDFVVVCESWK--RYW-LKGDRAGILDAF--IENLPGGPDNINLAPD---GSFWIGLI 250 (351)
Q Consensus 196 ~~~~-------------dg~~lyv~~~~~--~~~-i~~~~~~~~~~~--~~~~~g~pd~i~~d~~---G~lwva~~ 250 (351)
+++| +++.++.+..++ ++| +.... ...... .....+....++++++ |++.++..
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~-~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~ 228 (379)
T 3jrp_A 154 SWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDA-QTYVLESTLEGHSDWVRDVAWSPTVLLRSYLASVS 228 (379)
T ss_dssp EECCCC----------CTTCEEEEEETTSCEEEEEEETTT-TEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEE
T ss_pred EEcCccccccccccCCCCCCEEEEEeCCCeEEEEEecCCC-cceeeEEEEecccCcEeEEEECCCCCCCCeEEEEe
Confidence 9998 688777766665 444 22211 111111 1112223456788888 66666554
No 225
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=98.46 E-value=3e-05 Score=71.21 Aligned_cols=176 Identities=11% Similarity=0.024 Sum_probs=109.6
Q ss_pred CceEEEeeCCCeEEEEEcCCEEEEEEcCCCeEE-EEeecCCccccceEEcCCC-CEEEEeCCCCeEEEc--CCC--eEEe
Q 018705 54 PEDVSVVVSKGALYTATRDGWVKYFILHNETLV-NWKHIDSQSLLGLTTTKDG-GVILCDNEKGLLKVT--EEG--VEAI 127 (351)
Q Consensus 54 pe~i~~d~~~g~lyv~~~~g~I~~~d~~~g~~~-~~~~~~~~p~~gl~~d~~G-~L~v~d~~~gl~~~~--~~g--~~~l 127 (351)
-.+++++|++..|.++..||.|..||..+++.. .+........ .+++.+++ .++++....+.++++ .++ ...+
T Consensus 130 V~~v~~spdg~~l~sgs~d~~i~iwd~~~~~~~~~~~~h~~~V~-~~~~~~~~~~~l~s~s~D~~v~iwd~~~~~~~~~~ 208 (344)
T 4gqb_B 130 VSTVSVLSSGTQAVSGSKDICIKVWDLAQQVVLSSYRAHAAQVT-CVAASPHKDSVFLSCSEDNRILLWDTRCPKPASQI 208 (344)
T ss_dssp EEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEE-EEEECSSCTTEEEEEETTSCEEEEETTSSSCEEEC
T ss_pred EEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEEcCcCCceE-EEEecCCCCCceeeeccccccccccccccceeeee
Confidence 468899987788899999999999999888664 3333344556 89999887 576655555666665 344 4444
Q ss_pred cCC--CCCcccEEEccCC-cEEEEeCCCccCCcccccccccccCCceEEEEeCCCCeE-EEeecCccccceEEEcCCCCE
Q 018705 128 VPD--ASFTNDVIAASDG-TLYFTVASTKYTPTDFYKDMAEGKPYGQLRKYDPKLKET-TVLHEGFYFANGIALSKNEDF 203 (351)
Q Consensus 128 ~~~--~~~~n~l~~d~dG-~ly~t~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~~~~-~~~~~~~~~~ngi~~~~dg~~ 203 (351)
... ...++.+++.+++ .++++.+. +|.|..||..+++. ..+.......+.++++|++..
T Consensus 209 ~~~~~~~~~~~~~~~p~~~~~l~sg~~-----------------dg~v~~wd~~~~~~~~~~~~h~~~v~~v~fsp~g~~ 271 (344)
T 4gqb_B 209 GCSAPGYLPTSLAWHPQQSEVFVFGDE-----------------NGTVSLVDTKSTSCVLSSAVHSQCVTGLVFSPHSVP 271 (344)
T ss_dssp C----CCCEEEEEECSSCTTEEEEEET-----------------TSEEEEEESCC--CCEEEECCSSCEEEEEECSSSSC
T ss_pred ecceeeccceeeeecCCCCcceEEecc-----------------CCcEEEEECCCCcEEEEEcCCCCCEEEEEEccCCCe
Confidence 322 1457788998864 66665443 46789999876654 233333445678999999853
Q ss_pred -EEEEecce--eEEeecCCCCceeEEeccCCCCCCceEECCCCC-EEEEEe
Q 018705 204 -VVVCESWK--RYWLKGDRAGILDAFIENLPGGPDNINLAPDGS-FWIGLI 250 (351)
Q Consensus 204 -lyv~~~~~--~~~i~~~~~~~~~~~~~~~~g~pd~i~~d~~G~-lwva~~ 250 (351)
|..+..++ ++| +...++...+. ...+....+++.++|. +.++..
T Consensus 272 ~lasgs~D~~i~vw--d~~~~~~~~~~-~H~~~V~~v~~sp~~~~llas~s 319 (344)
T 4gqb_B 272 FLASLSEDCSLAVL--DSSLSELFRSQ-AHRDFVRDATWSPLNHSLLTTVG 319 (344)
T ss_dssp CEEEEETTSCEEEE--CTTCCEEEEEC-CCSSCEEEEEECSSSTTEEEEEE
T ss_pred EEEEEeCCCeEEEE--ECCCCcEEEEc-CCCCCEEEEEEeCCCCeEEEEEc
Confidence 44455555 565 32333322222 2233345678888886 555443
No 226
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=98.46 E-value=9.7e-05 Score=68.68 Aligned_cols=195 Identities=16% Similarity=0.071 Sum_probs=109.6
Q ss_pred CCCceEEEeeCCCeEEEEEc--CCEEEEEEcCCCeEEEE-eecCCccccceEEcCCC-CEEEEeCCCC-eEEEcCCC-eE
Q 018705 52 NHPEDVSVVVSKGALYTATR--DGWVKYFILHNETLVNW-KHIDSQSLLGLTTTKDG-GVILCDNEKG-LLKVTEEG-VE 125 (351)
Q Consensus 52 ~~pe~i~~d~~~g~lyv~~~--~g~I~~~d~~~g~~~~~-~~~~~~p~~gl~~d~~G-~L~v~d~~~g-l~~~~~~g-~~ 125 (351)
..|++++++|+++.+|++.. ++.|..+| +++++..- ... |- ++.+.+++ +.|++....+ ++.++.++ ..
T Consensus 125 ~~p~~~~~spDG~~l~v~n~~~~~~v~viD-~t~~~~~~~i~~---~~-~~~~~~~~~~~~~~~~~dg~~~~vd~~g~~~ 199 (373)
T 2mad_H 125 PYSWMNANTPNNADLLFFQFAAGPAVGLVV-QGGSSDDQLLSS---PT-CYHIHPGAPSTFYLLCAQGGLAKTDHAGGAA 199 (373)
T ss_pred CCccceEECCCCCEEEEEecCCCCeEEEEE-CCCCEEeEEcCC---Cc-eEEEEeCCCceEEEEcCCCCEEEEECCCcEE
Confidence 46899999998899999874 47899999 88876432 222 22 23333333 4555444433 33333333 11
Q ss_pred -EecC----CCCCc--ccEEEccC-CcEEEEeCCCccCCcccccccccccCCceEEEEeCCCCeEEEee----------c
Q 018705 126 -AIVP----DASFT--NDVIAASD-GTLYFTVASTKYTPTDFYKDMAEGKPYGQLRKYDPKLKETTVLH----------E 187 (351)
Q Consensus 126 -~l~~----~~~~~--n~l~~d~d-G~ly~t~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~~~~~~~~----------~ 187 (351)
.... ....| ....++++ +.+|+... .+.++.+|..++..+... .
T Consensus 200 ~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~------------------~~~v~vid~~~~~~~v~~~~~~~~~~~~~ 261 (373)
T 2mad_H 200 GAGLVGAMLTAAQNLLTQPAQANKSGRIVWPVY------------------SGKILQADISAAGATNKAPIDALSGGRKA 261 (373)
T ss_pred EEEeccccccCCcceeecceeEecCCEEEEEcC------------------CceEEEEeccCCcceEeeeeeecCCcccc
Confidence 1110 00111 12233443 34555442 246777777544322211 1
Q ss_pred Cccccce---EEEcCCCCEEEEEecc----------eeEEeecCCCCceeEEeccCCCCCCceEECCCCC-EEEEEecCC
Q 018705 188 GFYFANG---IALSKNEDFVVVCESW----------KRYWLKGDRAGILDAFIENLPGGPDNINLAPDGS-FWIGLIKMN 253 (351)
Q Consensus 188 ~~~~~ng---i~~~~dg~~lyv~~~~----------~~~~i~~~~~~~~~~~~~~~~g~pd~i~~d~~G~-lwva~~~~~ 253 (351)
....|.| +++++|++.+|++... +.+++-+...++....+ ..++.|.++++++||+ +++....
T Consensus 262 ~~~~p~g~~~~~~s~d~~~lyV~~~~~~~~~~~~~~~~V~VID~~t~~vv~~i-~~g~~p~~i~~s~Dg~~~l~v~~~-- 338 (373)
T 2mad_H 262 DTWRPGGWQQVAYLKSSDGIYLLTSEQSAWKLHAAAKEVTSVTGLVGQTSSQI-SLGHDVDAISVAQDGGPDLYALSA-- 338 (373)
T ss_pred cceecCceEeEEECCCCCEEEEEeccCCcccccCCCCeEEEEECCCCEEEEEE-ECCCCcCeEEECCCCCeEEEEEcC--
Confidence 1123666 8999999999997531 24555444333332222 3455699999999998 5555432
Q ss_pred chhhhhhhcChhHHHHHHhccchhhcccCCCCCCceEEEEEECCCCeEEEEE
Q 018705 254 QTGVRAIQKCREKWELLDAYPGLISLLLPMGSDAGARVVKVDGNDGKIIRDF 305 (351)
Q Consensus 254 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~g~~~~~~ 305 (351)
..+.|..||.++++++..+
T Consensus 339 ---------------------------------~~~~V~ViD~~t~~vv~~i 357 (373)
T 2mad_H 339 ---------------------------------GTEVLHIYDAGAGDQDQST 357 (373)
T ss_pred ---------------------------------CCCeEEEEECCCCCEEeee
Confidence 1136889999778888774
No 227
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=98.46 E-value=0.00017 Score=67.55 Aligned_cols=232 Identities=11% Similarity=0.040 Sum_probs=134.6
Q ss_pred CceEEEeeCCCeEEEEEcCCEEEEEEcCCCeEEE-EeecCCccccceEEcCCCCEEEEeCCCCeEEEc-C-CC---eEEe
Q 018705 54 PEDVSVVVSKGALYTATRDGWVKYFILHNETLVN-WKHIDSQSLLGLTTTKDGGVILCDNEKGLLKVT-E-EG---VEAI 127 (351)
Q Consensus 54 pe~i~~d~~~g~lyv~~~~g~I~~~d~~~g~~~~-~~~~~~~p~~gl~~d~~G~L~v~d~~~gl~~~~-~-~g---~~~l 127 (351)
-.+++|++++..+.++..||.|..||..+++... +........ .+. .++.+.++....+.+++. . .. ...+
T Consensus 150 V~sv~fspdg~~lasgs~Dg~v~iWd~~~~~~~~~~~~h~~~v~-~~s--~~~~~l~sgs~d~~i~~~d~~~~~~~~~~~ 226 (420)
T 4gga_A 150 ISSVAWIKEGNYLAVGTSSAEVQLWDVQQQKRLRNMTSHSARVG-SLS--WNSYILSSGSRSGHIHHHDVRVAEHHVATL 226 (420)
T ss_dssp EEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEE-EEE--EETTEEEEEETTSEEEEEETTSSSCEEEEE
T ss_pred EEEEEECCCCCEEEEEECCCeEEEEEcCCCcEEEEEeCCCCceE-EEe--eCCCEEEEEeCCCceeEeeecccceeeEEe
Confidence 3589999877888999999999999998886533 222223333 444 456666555455555554 2 22 4444
Q ss_pred cCCCCCcccEEEccCCcEEEEeCCCccCCcccccccccccCCceEEEEeCCCCeE-----EEeecCccccceEEEcCCCC
Q 018705 128 VPDASFTNDVIAASDGTLYFTVASTKYTPTDFYKDMAEGKPYGQLRKYDPKLKET-----TVLHEGFYFANGIALSKNED 202 (351)
Q Consensus 128 ~~~~~~~n~l~~d~dG~ly~t~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~~~~-----~~~~~~~~~~ngi~~~~dg~ 202 (351)
.........+...++|...++... ++.+..|+..+++. ............++++|++.
T Consensus 227 ~~h~~~~~~~~~~~~g~~l~s~~~-----------------D~~v~i~~~~~~~~~~~~~~~~~~~~~~V~~~~~~p~~~ 289 (420)
T 4gga_A 227 SGHSQEVCGLRWAPDGRHLASGGN-----------------DNLVNVWPSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQS 289 (420)
T ss_dssp ECCSSCEEEEEECTTSSEEEEEET-----------------TSCEEEEESSCCSSCSCCSEEECCCSSCEEEEEECTTCT
T ss_pred cccccceeeeeecCCCCeeeeeec-----------------cccceEEeeccccccceeeeeecccCCceeeeeeCCCcc
Confidence 443356778888899877666543 45677777654431 12222223456788888776
Q ss_pred EEEE-Eec--ce--eEEeecCCCCceeEEeccCCCCCCceEECCCCCEEEEEecCCchhhhhhhcChhHHHHHHhccchh
Q 018705 203 FVVV-CES--WK--RYWLKGDRAGILDAFIENLPGGPDNINLAPDGSFWIGLIKMNQTGVRAIQKCREKWELLDAYPGLI 277 (351)
Q Consensus 203 ~lyv-~~~--~~--~~~i~~~~~~~~~~~~~~~~g~pd~i~~d~~G~lwva~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 277 (351)
.++. +.. ++ ++| +...+....... .......+.+.++++..++...
T Consensus 290 ~~la~~~gs~D~~I~iw--d~~t~~~~~~~~-~~~~v~~~~~~~~~~~lv~~sg-------------------------- 340 (420)
T 4gga_A 290 NVLATGGGTSDRHIRIW--NVCSGACLSAVD-AHSQVCSILWSPHYKELISGHG-------------------------- 340 (420)
T ss_dssp TEEEEEECTTTCEEEEE--ETTTTEEEEEEE-CSSCEEEEEEETTTTEEEEEEC--------------------------
T ss_pred cEEEEEeecCCCEEEEE--eCCccccceeec-cccceeeeeecCCCCeEEEEEe--------------------------
Confidence 4443 321 23 455 222333222221 1222345667778875555432
Q ss_pred hcccCCCCCCceEEEEEECCCCeEEEEEECCCCCcccceeEEEEE-CCEEEEEecCCCeEEEEeCCCCCC
Q 018705 278 SLLLPMGSDAGARVVKVDGNDGKIIRDFNDPDATYISFVTSAAEF-DGNLYLASLQSNFIGILPLDGPEP 346 (351)
Q Consensus 278 ~~~~~~~~~~~~~v~~~~~~~g~~~~~~~~~~g~~~~~~~~~~~~-~g~L~ig~~~~~~i~~~~~~~~~~ 346 (351)
...+.|..+|..+++.+..+..+.+ .++++... +|++.++......|..+++....|
T Consensus 341 --------~~d~~I~iwd~~~~~~v~~l~gH~~----~V~~l~~spdg~~l~S~s~D~tvriWdv~~~~~ 398 (420)
T 4gga_A 341 --------FAQNQLVIWKYPTMAKVAELKGHTS----RVLSLTMSPDGATVASAAADETLRLWRCFELDP 398 (420)
T ss_dssp --------TTTCCEEEEETTTCCEEEEECCCSS----CEEEEEECTTSSCEEEEETTTEEEEECCSCSSC
T ss_pred --------cCCCEEEEEECCCCcEEEEEcCCCC----CEEEEEEcCCCCEEEEEecCCeEEEEECCCCCc
Confidence 1224577778768888888876544 47777765 455444444456677778766555
No 228
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=98.45 E-value=0.00052 Score=62.52 Aligned_cols=146 Identities=10% Similarity=0.094 Sum_probs=97.1
Q ss_pred CCCceEEEeeCCCeEEEEEcCCEEEEEEcCCCeEE---EEeecCCccccceEEcCCCCEEEEeCCCCeEEEc--CCC--e
Q 018705 52 NHPEDVSVVVSKGALYTATRDGWVKYFILHNETLV---NWKHIDSQSLLGLTTTKDGGVILCDNEKGLLKVT--EEG--V 124 (351)
Q Consensus 52 ~~pe~i~~d~~~g~lyv~~~~g~I~~~d~~~g~~~---~~~~~~~~p~~gl~~d~~G~L~v~d~~~gl~~~~--~~g--~ 124 (351)
..-.+++++|++..|.++..|+.|..|+..++..+ .+........ .+++.++|+++++....+.+++. .++ .
T Consensus 62 ~~v~~~~~sp~g~~l~s~s~D~~v~iw~~~~~~~~~~~~~~~h~~~v~-~v~~sp~~~~l~s~s~D~~v~iwd~~~~~~~ 140 (345)
T 3fm0_A 62 RTVRKVAWSPCGNYLASASFDATTCIWKKNQDDFECVTTLEGHENEVK-SVAWAPSGNLLATCSRDKSVWVWEVDEEDEY 140 (345)
T ss_dssp SCEEEEEECTTSSEEEEEETTSCEEEEEECCC-EEEEEEECCCSSCEE-EEEECTTSSEEEEEETTSCEEEEEECTTSCE
T ss_pred CcEEEEEECCCCCEEEEEECCCcEEEEEccCCCeEEEEEccCCCCCce-EEEEeCCCCEEEEEECCCeEEEEECCCCCCe
Confidence 34568999987788899999999999987666543 2222334456 89999999877765555655555 222 2
Q ss_pred ---EEecCCCCCcccEEEccCCcEEEEeCCCccCCcccccccccccCCceEEEEeCCCCeEE---EeecCccccceEEEc
Q 018705 125 ---EAIVPDASFTNDVIAASDGTLYFTVASTKYTPTDFYKDMAEGKPYGQLRKYDPKLKETT---VLHEGFYFANGIALS 198 (351)
Q Consensus 125 ---~~l~~~~~~~n~l~~d~dG~ly~t~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~~~~~---~~~~~~~~~ngi~~~ 198 (351)
..+......++.++++|+|.+.++.+. ++.|..||..+++.. .+.........++++
T Consensus 141 ~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~-----------------d~~i~~w~~~~~~~~~~~~~~~h~~~v~~l~~s 203 (345)
T 3fm0_A 141 ECVSVLNSHTQDVKHVVWHPSQELLASASY-----------------DDTVKLYREEEDDWVCCATLEGHESTVWSLAFD 203 (345)
T ss_dssp EEEEEECCCCSCEEEEEECSSSSCEEEEET-----------------TSCEEEEEEETTEEEEEEEECCCSSCEEEEEEC
T ss_pred EEEEEecCcCCCeEEEEECCCCCEEEEEeC-----------------CCcEEEEEecCCCEEEEEEecCCCCceEEEEEC
Confidence 223333356888999999987766543 456777776555432 222233456789999
Q ss_pred CCCCEEEEEecce--eEEe
Q 018705 199 KNEDFVVVCESWK--RYWL 215 (351)
Q Consensus 199 ~dg~~lyv~~~~~--~~~i 215 (351)
|+++.|..+..++ ++|-
T Consensus 204 p~g~~l~s~s~D~~v~iW~ 222 (345)
T 3fm0_A 204 PSGQRLASCSDDRTVRIWR 222 (345)
T ss_dssp TTSSEEEEEETTSCEEEEE
T ss_pred CCCCEEEEEeCCCeEEEec
Confidence 9999777776666 6663
No 229
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=98.44 E-value=3.9e-05 Score=76.94 Aligned_cols=130 Identities=12% Similarity=0.009 Sum_probs=80.0
Q ss_pred CceEEEeeCCCeEEEEEcCCEEEEEEcCCCeE--EEEeecC-----------------CccccceEEcCCCCEEEEeCCC
Q 018705 54 PEDVSVVVSKGALYTATRDGWVKYFILHNETL--VNWKHID-----------------SQSLLGLTTTKDGGVILCDNEK 114 (351)
Q Consensus 54 pe~i~~d~~~g~lyv~~~~g~I~~~d~~~g~~--~~~~~~~-----------------~~p~~gl~~d~~G~L~v~d~~~ 114 (351)
..++.|. ++.++....+| | .+|..+|+. +.+.... ..+. .+++++++.+.++. ..
T Consensus 28 ~~~~~w~--g~~~~~~~~~~-i-~~d~~tg~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~v~-~~~~spd~~~~~~~-~~ 101 (706)
T 2z3z_A 28 VVGLQWM--GDNYVFIEGDD-L-VFNKANGKSAQTTRFSAADLNALMPEGCKFQTTDAFPSF-RTLDAGRGLVVLFT-QG 101 (706)
T ss_dssp CTTCEEE--TTEEEEEETTE-E-EEEC-------CEEEEHHHHHTTC-----------CCCE-EEEETTTTEEEEEE-TT
T ss_pred CCCCcCc--CCeEEEEeCCc-E-EEECCCCcEeeEEeechhHhhhhccchhccccccccCce-eEEECCCCeEEEEE-CC
Confidence 3456776 55565555566 8 999888876 4443221 2355 88999996555554 34
Q ss_pred CeEEEcC-CC-eEEecCCCCCcccEEEccCCc-EEEEeCCCccCCcccccccccccCCceEEEEeCCC-----CeEEEee
Q 018705 115 GLLKVTE-EG-VEAIVPDASFTNDVIAASDGT-LYFTVASTKYTPTDFYKDMAEGKPYGQLRKYDPKL-----KETTVLH 186 (351)
Q Consensus 115 gl~~~~~-~g-~~~l~~~~~~~n~l~~d~dG~-ly~t~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~-----~~~~~~~ 186 (351)
.++.++. ++ ...+......+.+++++|||+ |.++. .+.|+.+|..+ ++...+.
T Consensus 102 ~i~~~d~~~~~~~~l~~~~~~~~~~~~SpdG~~la~~~-------------------~~~i~v~~~~~~~~~~g~~~~~~ 162 (706)
T 2z3z_A 102 GLVGFDMLARKVTYLFDTNEETASLDFSPVGDRVAYVR-------------------NHNLYIARGGKLGEGMSRAIAVT 162 (706)
T ss_dssp EEEEEETTTTEEEEEECCTTCCTTCEECTTSSEEEEEE-------------------TTEEEEEECBCTTSCCCCCEESC
T ss_pred EEEEEECCCCceEEccCCcccccCCcCCCCCCEEEEEE-------------------CCeEEEEecCcccccCCCcEEec
Confidence 5666664 55 554443335678899999995 44432 24799998877 6655543
Q ss_pred cCccc---------------cceEEEcCCCCEEEEEe
Q 018705 187 EGFYF---------------ANGIALSKNEDFVVVCE 208 (351)
Q Consensus 187 ~~~~~---------------~ngi~~~~dg~~lyv~~ 208 (351)
..... +.++++||||+.|+++.
T Consensus 163 ~~~~~~~~~g~~~~~ee~~~~~~~~~SpDg~~la~~~ 199 (706)
T 2z3z_A 163 IDGTETLVYGQAVHQREFGIEKGTFWSPKGSCLAFYR 199 (706)
T ss_dssp SCCBTTEEESSCCGGGCTTCCCSEEECTTSSEEEEEE
T ss_pred cCCCCCeEcccchhhhhcCCCceEEECCCCCEEEEEE
Confidence 32222 47899999999888765
No 230
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=98.42 E-value=1.1e-05 Score=74.08 Aligned_cols=181 Identities=5% Similarity=-0.091 Sum_probs=103.1
Q ss_pred CCceEEEeeCCCeEEEEEcCCEEEEEEcCCCe----EEEEeecCCccccceEEcCCCCEEEEeCCCCeEEEcC--CC---
Q 018705 53 HPEDVSVVVSKGALYTATRDGWVKYFILHNET----LVNWKHIDSQSLLGLTTTKDGGVILCDNEKGLLKVTE--EG--- 123 (351)
Q Consensus 53 ~pe~i~~d~~~g~lyv~~~~g~I~~~d~~~g~----~~~~~~~~~~p~~gl~~d~~G~L~v~d~~~gl~~~~~--~g--- 123 (351)
...++++.+++..+.++..||.|..||..+++ ...+........ .+++.++|+++++....+.+++.. .+
T Consensus 57 ~v~~~~~s~~~~~l~s~s~d~~v~vwd~~~~~~~~~~~~~~~~~~~v~-~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~ 135 (377)
T 3dwl_C 57 IVTCVDWAPKSNRIVTCSQDRNAYVYEKRPDGTWKQTLVLLRLNRAAT-FVRWSPNEDKFAVGSGARVISVCYFEQENDW 135 (377)
T ss_dssp CEEEEEECTTTCCEEEEETTSSEEEC------CCCCEEECCCCSSCEE-EEECCTTSSCCEEEESSSCEEECCC-----C
T ss_pred eEEEEEEeCCCCEEEEEeCCCeEEEEEcCCCCceeeeeEecccCCceE-EEEECCCCCEEEEEecCCeEEEEEECCcccc
Confidence 34688999777788899999999999987765 223333344556 899999987555444455566552 22
Q ss_pred --eEEecC-CCCCcccEEEccCCcEEEEeCCCccCCcccccccccccCCceEEEEeCCC------------------CeE
Q 018705 124 --VEAIVP-DASFTNDVIAASDGTLYFTVASTKYTPTDFYKDMAEGKPYGQLRKYDPKL------------------KET 182 (351)
Q Consensus 124 --~~~l~~-~~~~~n~l~~d~dG~ly~t~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~------------------~~~ 182 (351)
.+.+.. ....+++++++++|.+.++.+. ++.|..||..+ ++.
T Consensus 136 ~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~-----------------d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~ 198 (377)
T 3dwl_C 136 WVSKHLKRPLRSTILSLDWHPNNVLLAAGCA-----------------DRKAYVLSAYVRDVDAKPEASVWGSRLPFNTV 198 (377)
T ss_dssp CCCEEECSSCCSCEEEEEECTTSSEEEEEES-----------------SSCEEEEEECCSSCC-CCCSCSSCSCCCEEEE
T ss_pred eeeeEeecccCCCeEEEEEcCCCCEEEEEeC-----------------CCEEEEEEEEecccCCCccccccccccchhhh
Confidence 233433 3367889999999987766543 35676776532 111
Q ss_pred EEeecCccccceEEEcCCCCEEEEEecce--eEEe-ecCCCCc--eeEEeccCCCCCCceEECCCCCEEEEEecC
Q 018705 183 TVLHEGFYFANGIALSKNEDFVVVCESWK--RYWL-KGDRAGI--LDAFIENLPGGPDNINLAPDGSFWIGLIKM 252 (351)
Q Consensus 183 ~~~~~~~~~~ngi~~~~dg~~lyv~~~~~--~~~i-~~~~~~~--~~~~~~~~~g~pd~i~~d~~G~lwva~~~~ 252 (351)
............++++|+++.|+.+..++ ++|- ....... ...+. ...+....++++++|++.++....
T Consensus 199 ~~~~~~~~~v~~~~~sp~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~-~~~~~v~~~~~s~~~~~l~~~~~~ 272 (377)
T 3dwl_C 199 CAEYPSGGWVHAVGFSPSGNALAYAGHDSSVTIAYPSAPEQPPRALITVK-LSQLPLRSLLWANESAIVAAGYNY 272 (377)
T ss_dssp EECCCCSSSEEEEEECTTSSCEEEEETTTEEC-CEECSTTSCEEECCCEE-CSSSCEEEEEEEETTEEEEEESSS
T ss_pred hhcccCCceEEEEEECCCCCEEEEEeCCCcEEEEECCCCCCcceeeEeec-CCCCceEEEEEcCCCCEEEEEcCC
Confidence 11112223467899999999777776665 4442 2211100 11111 112223567888888877665443
No 231
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=98.42 E-value=3.9e-05 Score=72.44 Aligned_cols=244 Identities=11% Similarity=0.061 Sum_probs=136.8
Q ss_pred CCceEEEeeC-CCeEEEEEcCCEEEEEEcCCCeEEEEeecC---CccccceEEcCCCCEEEEeCCCCeEEEc-CCC--eE
Q 018705 53 HPEDVSVVVS-KGALYTATRDGWVKYFILHNETLVNWKHID---SQSLLGLTTTKDGGVILCDNEKGLLKVT-EEG--VE 125 (351)
Q Consensus 53 ~pe~i~~d~~-~g~lyv~~~~g~I~~~d~~~g~~~~~~~~~---~~p~~gl~~d~~G~L~v~d~~~gl~~~~-~~g--~~ 125 (351)
.-.+|+|.|. +..|+++..||.|..||.+++..+.+.... .... .++++++|+++++....+.+++. .++ +.
T Consensus 166 ~V~~l~f~p~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~g~~dg~i~~wd~~~~~~~ 244 (435)
T 4e54_B 166 SITGLKFNPLNTNQFYASSMEGTTRLQDFKGNILRVFASSDTINIWFC-SLDVSASSRMVVTGDNVGNVILLNMDGKELW 244 (435)
T ss_dssp CCCEEEECSSCTTEEEEECSSSCEEEEETTSCEEEEEECCSSCSCCCC-CEEEETTTTEEEEECSSSBEEEEESSSCBCC
T ss_pred CEEEEEEeCCCCCEEEEEeCCCEEEEeeccCCceeEEeccCCCCccEE-EEEECCCCCEEEEEeCCCcEeeeccCcceeE
Confidence 3468999874 457888899999999998766665543322 2235 78999999887776666666665 344 44
Q ss_pred EecCCCCCcccEEEccCCc-EEEEeCCCccCCcccccccccccCCceEEEEeCCCCeEE-Eee---cCccccceEEEcCC
Q 018705 126 AIVPDASFTNDVIAASDGT-LYFTVASTKYTPTDFYKDMAEGKPYGQLRKYDPKLKETT-VLH---EGFYFANGIALSKN 200 (351)
Q Consensus 126 ~l~~~~~~~n~l~~d~dG~-ly~t~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~~~~~-~~~---~~~~~~ngi~~~~d 200 (351)
.+......+++++++|++. ++++.+. ++.|..||..+.+.. .+. ......+.++++||
T Consensus 245 ~~~~h~~~v~~v~~~p~~~~~~~s~s~-----------------d~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~spd 307 (435)
T 4e54_B 245 NLRMHKKKVTHVALNPCCDWFLATASV-----------------DQTVKIWDLRQVRGKASFLYSLPHRHPVNAACFSPD 307 (435)
T ss_dssp CSBCCSSCEEEEEECTTCSSEEEEEET-----------------TSBCCEEETTTCCSSSCCSBCCBCSSCEEECCBCTT
T ss_pred EEecccceEEeeeecCCCceEEEEecC-----------------cceeeEEecccccccceEEEeeeccccccceeECCC
Confidence 3333336788999999875 5555433 356677776543211 111 11223567889999
Q ss_pred CCEEEEEecce--eEEeecCCCCce-eEEeccC-----CCCCCceEECCCCCEEEEEecCCchhhhhhhcChhHHHHHHh
Q 018705 201 EDFVVVCESWK--RYWLKGDRAGIL-DAFIENL-----PGGPDNINLAPDGSFWIGLIKMNQTGVRAIQKCREKWELLDA 272 (351)
Q Consensus 201 g~~lyv~~~~~--~~~i~~~~~~~~-~~~~~~~-----~g~pd~i~~d~~G~lwva~~~~~~~~~~~~~~~~~~~~~~~~ 272 (351)
|+.|+.+..++ ++|-.. .++. ..+.... ...+-...+.+++.+.+..........
T Consensus 308 g~~l~s~~~D~~i~iwd~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~--------------- 370 (435)
T 4e54_B 308 GARLLTTDQKSEIRVYSAS--QWDCPLGLIPHPHRHFQHLTPIKAAWHPRYNLIVVGRYPDPNFK--------------- 370 (435)
T ss_dssp SSEEEEEESSSCEEEEESS--SSSSEEEECCCCCCCCSSSCCCBCEECSSSSCEEEECCCCTTSC---------------
T ss_pred CCeeEEEcCCCEEEEEECC--CCccceEEecccccccccceeEEEEEcCCCCEEEEEEcCCCCeE---------------
Confidence 99777776666 555321 1111 1111100 011223456677765554432211100
Q ss_pred ccchhhcccCCCCCCceEEEEEECCCCeEEEEEECCCCCcccceeEEE-EE-CCEEEEEecCCCeEEEEeCCCC
Q 018705 273 YPGLISLLLPMGSDAGARVVKVDGNDGKIIRDFNDPDATYISFVTSAA-EF-DGNLYLASLQSNFIGILPLDGP 344 (351)
Q Consensus 273 ~~~~~~~~~~~~~~~~~~v~~~~~~~g~~~~~~~~~~g~~~~~~~~~~-~~-~g~L~ig~~~~~~i~~~~~~~~ 344 (351)
++ .+.....|..+|.++|+.+..+..+.. ..+.++. .+ +|++.+++. .+.|..+++...
T Consensus 371 ----~~-----~~~~~~~i~iwd~~~g~~~~~l~~~~~---~~v~s~~~fspdg~~lasg~-d~~i~iW~~~~g 431 (435)
T 4e54_B 371 ----SC-----TPYELRTIDVFDGNSGKMMCQLYDPES---SGISSLNEFNPMGDTLASAM-GYHILIWSQQEA 431 (435)
T ss_dssp ----CS-----STTCCCCEEEECSSSCCEEEEECCSSC---CCCCCEEEECTTSSCEEEEC-SSEEEECCCC--
T ss_pred ----EE-----EecCCCEEEEEECCCCcEEEEEeCCCC---CcEEEEEEECCCCCEEEEEc-CCcEEEEECCcC
Confidence 00 112223466778768888887765432 2344443 33 455555543 667877776543
No 232
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=98.42 E-value=4.6e-06 Score=77.54 Aligned_cols=178 Identities=12% Similarity=0.068 Sum_probs=103.5
Q ss_pred CCceEEEeeCCC-eEEEE----------EcCCEEEEEEcCCCeEE---EEeecCCccccceEEcCCCCEEEEeCCCCeEE
Q 018705 53 HPEDVSVVVSKG-ALYTA----------TRDGWVKYFILHNETLV---NWKHIDSQSLLGLTTTKDGGVILCDNEKGLLK 118 (351)
Q Consensus 53 ~pe~i~~d~~~g-~lyv~----------~~~g~I~~~d~~~g~~~---~~~~~~~~p~~gl~~d~~G~L~v~d~~~gl~~ 118 (351)
...+++++|++. .++++ ..+|.|..|+..+++.. .......... .+++.++|+++++....+.++
T Consensus 14 ~v~~~~~sp~g~~~l~~g~~~g~~~~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~v~-~~~~s~~~~~l~~~~~dg~v~ 92 (416)
T 2pm9_A 14 RTATFAWSHDKIPLLVSGTVSGTVDANFSTDSSLELWSLLAADSEKPIASLQVDSKFN-DLDWSHNNKIIAGALDNGSLE 92 (416)
T ss_dssp ESCBCCBCSSSSCEEEEBCBSSCCCSSCCCCCCCEEEESSSGGGCSCSCCCCCSSCEE-EEEECSSSSCEEEEESSSCEE
T ss_pred hcceEeeCCCCCCEEEEEecCcccccccCCCCeEEEEEccCCCCCcEEEEEecCCceE-EEEECCCCCeEEEEccCCeEE
Confidence 456788887665 67777 67888999998666421 1112234456 899999997655544445455
Q ss_pred Ec--CC---C---eEEecCCCCCcccEEEccC-CcEEEEeCCCccCCcccccccccccCCceEEEEeCCCCe------EE
Q 018705 119 VT--EE---G---VEAIVPDASFTNDVIAASD-GTLYFTVASTKYTPTDFYKDMAEGKPYGQLRKYDPKLKE------TT 183 (351)
Q Consensus 119 ~~--~~---g---~~~l~~~~~~~n~l~~d~d-G~ly~t~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~~~------~~ 183 (351)
+. .. + ...+......+++++++++ +.++++.+. +|.|..||..+++ ..
T Consensus 93 vw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~-----------------dg~v~iwd~~~~~~~~~~~~~ 155 (416)
T 2pm9_A 93 LYSTNEANNAINSMARFSNHSSSVKTVKFNAKQDNVLASGGN-----------------NGEIFIWDMNKCTESPSNYTP 155 (416)
T ss_dssp EECCSSTTSCCCEEEECCCSSSCCCEEEECSSSTTBEEEECS-----------------SSCEEBCBTTTTSSCTTTCCC
T ss_pred EeecccccccccchhhccCCccceEEEEEcCCCCCEEEEEcC-----------------CCeEEEEECCCCccccccccc
Confidence 44 23 2 3333333367899999998 677776654 4678888877654 11
Q ss_pred Ee----ecCccccceEEEcCC-CCEEEEEecce--eEEeecCCCCcee-EEeccC-----CCCCCceEECCCC-CEEEEE
Q 018705 184 VL----HEGFYFANGIALSKN-EDFVVVCESWK--RYWLKGDRAGILD-AFIENL-----PGGPDNINLAPDG-SFWIGL 249 (351)
Q Consensus 184 ~~----~~~~~~~ngi~~~~d-g~~lyv~~~~~--~~~i~~~~~~~~~-~~~~~~-----~g~pd~i~~d~~G-~lwva~ 249 (351)
.. .........++++++ ++.++.+..++ ++| +...++.. .+.... ......++++++| +++++.
T Consensus 156 ~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~v~iw--d~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~ 233 (416)
T 2pm9_A 156 LTPGQSMSSVDEVISLAWNQSLAHVFASAGSSNFASIW--DLKAKKEVIHLSYTSPNSGIKQQLSVVEWHPKNSTRVATA 233 (416)
T ss_dssp BCCCCSCCSSCCCCEEEECSSCTTEEEEESSSSCEEEE--ETTTTEEEEEECCCCCSSCCCCCEEEEEECSSCTTEEEEE
T ss_pred cccccccCCCCCeeEEEeCCCCCcEEEEEcCCCCEEEE--ECCCCCcceEEeccccccccCCceEEEEECCCCCCEEEEE
Confidence 11 112235678999999 56555555555 444 22222221 121110 2234557888887 455554
Q ss_pred e
Q 018705 250 I 250 (351)
Q Consensus 250 ~ 250 (351)
.
T Consensus 234 ~ 234 (416)
T 2pm9_A 234 T 234 (416)
T ss_dssp E
T ss_pred E
Confidence 3
No 233
>3b7f_A Glycosyl hydrolase, BNR repeat; 7-bladed beta-propeller fold, structural genomics, joint CEN structural genomics, JCSG; 2.20A {Ralstonia eutropha}
Probab=98.37 E-value=6.6e-05 Score=70.10 Aligned_cols=170 Identities=10% Similarity=0.031 Sum_probs=96.5
Q ss_pred EeeCCCeEEEEEcCCEEEEEEcCC--CeEEEEe--ecCCccccceEEcC--CCCEEEEeCCC----CeEEEcCCC--eEE
Q 018705 59 VVVSKGALYTATRDGWVKYFILHN--ETLVNWK--HIDSQSLLGLTTTK--DGGVILCDNEK----GLLKVTEEG--VEA 126 (351)
Q Consensus 59 ~d~~~g~lyv~~~~g~I~~~d~~~--g~~~~~~--~~~~~p~~gl~~d~--~G~L~v~d~~~----gl~~~~~~g--~~~ 126 (351)
.| +.+.||+++..| +++++..+ ..++... ....... .|++|+ +++||++.... ++++....| .+.
T Consensus 19 ~d-~~g~l~vgt~~G-l~~~~~~~~g~~W~~~~~~~~~~~v~-~i~~dp~~~~~l~~g~~~g~~g~gl~~s~D~G~tW~~ 95 (394)
T 3b7f_A 19 ES-GPVMLLVATIKG-AWFLASDPARRTWELRGPVFLGHTIH-HIVQDPREPERMLMAARTGHLGPTVFRSDDGGGNWTE 95 (394)
T ss_dssp CC-SCCEEEEEETTE-EEEEEECTTSCSEEEEEEESTTSEEE-EEEECSSSTTCEEEEEEC--CCEEEEEESSTTSCCEE
T ss_pred CC-CCCEEEEEecCc-eEEEECCCCCCCceECCccCCCCceE-EEEECCCCCCeEEEEecCCCCCccEEEeCCCCCCceE
Confidence 45 578999999876 88887644 3565442 2234456 899998 78999987655 688776555 444
Q ss_pred ecCCC--------------CCcccEEEcc---CCcEEEEeCCCccCCcccccccccccCCceEEEEeCCCCeEEEeecCc
Q 018705 127 IVPDA--------------SFTNDVIAAS---DGTLYFTVASTKYTPTDFYKDMAEGKPYGQLRKYDPKLKETTVLHEGF 189 (351)
Q Consensus 127 l~~~~--------------~~~n~l~~d~---dG~ly~t~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~~~~~~~~~~~ 189 (351)
+.... ..+.+|++++ .+.+|+... .++|++.+..+...+.+....
T Consensus 96 ~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~l~~g~~------------------~ggl~~S~DgG~tW~~~~~~~ 157 (394)
T 3b7f_A 96 ATRPPAFNKAPEGETGRVVDHVFWLTPGHASEPGTWYAGTS------------------PQGLFRSTDHGASWEPVAGFN 157 (394)
T ss_dssp CSBCCCCCCCC----CCCCCEEEEEEECCTTSTTCEEEEEE------------------TTEEEEESSTTSBCEECHHHH
T ss_pred CCccccCCCcccccccccccceeEEEeCCCCCCCEEEEEec------------------CCcEEEEcCCCCCeEECcCcc
Confidence 43211 1233577885 568898653 247888865544444442100
Q ss_pred -------------------cccceEEEcCC-CCEEEEEecce-eEEeecCCCCceeEEecc-----CC------C-CCCc
Q 018705 190 -------------------YFANGIALSKN-EDFVVVCESWK-RYWLKGDRAGILDAFIEN-----LP------G-GPDN 236 (351)
Q Consensus 190 -------------------~~~ngi~~~~d-g~~lyv~~~~~-~~~i~~~~~~~~~~~~~~-----~~------g-~pd~ 236 (351)
.....|++++. .+.+|++...+ .+...+. ..+.+.+... +| + ....
T Consensus 158 ~~p~~~~~~~~~~~g~~~~~~i~~i~~d~~~~~~l~vg~~~ggl~~s~Dg-G~tW~~~~~~~~~~~~p~~~~~~g~~~~~ 236 (394)
T 3b7f_A 158 DHPMRRAWTGGEQDGTPDGPKMHSILVDPRDPKHLYIGMSSGGVFESTDA-GTDWKPLNRGCAANFLPDPNVEFGHDPHC 236 (394)
T ss_dssp TCTTHHHHHCCC----CCCCEEEEEEECTTCTTCEEEEEETBEEEEESST-TSSCEECCTTCCCTTSSSSSSSSCBCEEE
T ss_pred CCccccccccccccCCCCCCceeEEEECCCCCCEEEEEECCCCEEEECCC-CCCceECCCCccccccCCCccccCcceeE
Confidence 11236888873 34588876444 3333322 1223322211 11 0 1134
Q ss_pred eEECCC--CCEEEEEe
Q 018705 237 INLAPD--GSFWIGLI 250 (351)
Q Consensus 237 i~~d~~--G~lwva~~ 250 (351)
++++++ +.+|++..
T Consensus 237 i~~~~~~~~~l~vg~~ 252 (394)
T 3b7f_A 237 VVQHPAAPDILYQQNH 252 (394)
T ss_dssp EEECSSSTTEEEEEET
T ss_pred EEECCCCCCEEEEEcC
Confidence 577765 77999853
No 234
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=98.36 E-value=0.00023 Score=64.42 Aligned_cols=144 Identities=13% Similarity=0.049 Sum_probs=89.4
Q ss_pred CCceEEEeeCCCeEEEEEcCCEEEEEEcCCC-------eE-EEEeecCCccccceEEcCCCCEEEEeCCCCeEEEc-C--
Q 018705 53 HPEDVSVVVSKGALYTATRDGWVKYFILHNE-------TL-VNWKHIDSQSLLGLTTTKDGGVILCDNEKGLLKVT-E-- 121 (351)
Q Consensus 53 ~pe~i~~d~~~g~lyv~~~~g~I~~~d~~~g-------~~-~~~~~~~~~p~~gl~~d~~G~L~v~d~~~gl~~~~-~-- 121 (351)
.-.+++++|++..+.++..|+.|..|+..++ +. ..+........ .++++++|+++++-...+.+++. .
T Consensus 60 ~v~~v~~sp~~~~las~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~-~v~~sp~g~~las~s~D~~v~iwd~~~ 138 (330)
T 2hes_X 60 AIRSVAWRPHTSLLAAGSFDSTVSIWAKEESADRTFEMDLLAIIEGHENEVK-GVAWSNDGYYLATCSRDKSVWIWETDE 138 (330)
T ss_dssp CEEEEEECTTSSEEEEEETTSCEEEEEC-------CCCEEEEEEC----CEE-EEEECTTSCEEEEEETTSCEEEEECCT
T ss_pred CEEEEEECCCCCEEEEEeCCCcEEEEEcccCcCccccceeEEEEcCCCCcEE-EEEECCCCCEEEEEeCCCEEEEEeccC
Confidence 4568999987778889999999999987432 11 12222234456 89999999877765556666665 2
Q ss_pred CC--e---EEecCCCCCcccEEEccCCcEEEEeCCCccCCcccccccccccCCceEEEEeCCCCeE---EEeecCccccc
Q 018705 122 EG--V---EAIVPDASFTNDVIAASDGTLYFTVASTKYTPTDFYKDMAEGKPYGQLRKYDPKLKET---TVLHEGFYFAN 193 (351)
Q Consensus 122 ~g--~---~~l~~~~~~~n~l~~d~dG~ly~t~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~~~~---~~~~~~~~~~n 193 (351)
.+ . ..+......+++++++|+|.+.++.+. ++.|..||..+++. ..+........
T Consensus 139 ~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~-----------------D~~i~iW~~~~~~~~~~~~~~~h~~~v~ 201 (330)
T 2hes_X 139 SGEEYECISVLQEHSQDVKHVIWHPSEALLASSSY-----------------DDTVRIWKDYDDDWECVAVLNGHEGTVW 201 (330)
T ss_dssp TCCCCEEEEEECCCSSCEEEEEECSSSSEEEEEET-----------------TSCEEEEEEETTEEEEEEEECCCSSCEE
T ss_pred CCCCeEEEEEeccCCCceEEEEECCCCCEEEEEcC-----------------CCeEEEEECCCCCeeEEEEccCCCCcEE
Confidence 22 2 233333367889999999988877654 45677776544432 22222234456
Q ss_pred eEEEcCC--CCEEEEEecce--eEE
Q 018705 194 GIALSKN--EDFVVVCESWK--RYW 214 (351)
Q Consensus 194 gi~~~~d--g~~lyv~~~~~--~~~ 214 (351)
.++++++ +..|..+..++ ++|
T Consensus 202 ~~~~~~~~~~~~l~s~s~D~~v~iw 226 (330)
T 2hes_X 202 SSDFDKTEGVFRLCSGSDDSTVRVW 226 (330)
T ss_dssp EEEECCSSSSCEEEEEETTSCEEEE
T ss_pred EEEecCCCCeeEEEEEeCCCeEEEE
Confidence 7899998 55555555555 665
No 235
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=98.36 E-value=0.00012 Score=67.69 Aligned_cols=177 Identities=14% Similarity=0.100 Sum_probs=113.4
Q ss_pred CceEEEeeCC-CeEEEEEcCCEEEEEEcCCCeEEEEe------ecCCccccceEEcC-CCCEEEEeCCCCeEEEc--C-C
Q 018705 54 PEDVSVVVSK-GALYTATRDGWVKYFILHNETLVNWK------HIDSQSLLGLTTTK-DGGVILCDNEKGLLKVT--E-E 122 (351)
Q Consensus 54 pe~i~~d~~~-g~lyv~~~~g~I~~~d~~~g~~~~~~------~~~~~p~~gl~~d~-~G~L~v~d~~~gl~~~~--~-~ 122 (351)
..++.+.|.+ ..++++..|+.|..||..+++..... ....... .+++.+ +++++++....+.++++ . .
T Consensus 160 v~~~~~~~~~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~~~~~~h~~~v~-~~~~~~~~~~~l~sgs~D~~v~~wd~~~~ 238 (380)
T 3iz6_a 160 ASSCQYVPDQETRLITGSGDQTCVLWDVTTGQRISIFGSEFPSGHTADVL-SLSINSLNANMFISGSCDTTVRLWDLRIT 238 (380)
T ss_dssp CCCCBCCSSSSSCEEEECTTSCEEEECTTTCCEEEEECCCSSSSCCSCEE-EEEECSSSCCEEEEEETTSCEEEEETTTT
T ss_pred eEEEEEecCCCCEEEEECCCCcEEEEEcCCCcEEEEeecccCCCCccCeE-EEEeecCCCCEEEEEECCCeEEEEECCCC
Confidence 4456666544 46888999999999998877653321 1112344 677765 77877776666766665 2 3
Q ss_pred C--eEEecCCCCCcccEEEccCCcEEEEeCCCccCCcccccccccccCCceEEEEeCCCCeEEEeecC--------cccc
Q 018705 123 G--VEAIVPDASFTNDVIAASDGTLYFTVASTKYTPTDFYKDMAEGKPYGQLRKYDPKLKETTVLHEG--------FYFA 192 (351)
Q Consensus 123 g--~~~l~~~~~~~n~l~~d~dG~ly~t~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~~~~~~~~~~--------~~~~ 192 (351)
+ ...+......+++++++|+|..+++.+. +|.|..||..+++....... ....
T Consensus 239 ~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~-----------------D~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~v 301 (380)
T 3iz6_a 239 SRAVRTYHGHEGDINSVKFFPDGQRFGTGSD-----------------DGTCRLFDMRTGHQLQVYNREPDRNDNELPIV 301 (380)
T ss_dssp CCCCEEECCCSSCCCEEEECTTSSEEEEECS-----------------SSCEEEEETTTTEEEEEECCCCSSSCCSSCSC
T ss_pred CcceEEECCcCCCeEEEEEecCCCeEEEEcC-----------------CCeEEEEECCCCcEEEEecccccccccccCce
Confidence 3 5555544467999999999988887765 56789999887765433221 1235
Q ss_pred ceEEEcCCCCEEEEEecce--eEEeecCCCCce-eEEe---ccCCCCCCceEECCCCCEEEEEe
Q 018705 193 NGIALSKNEDFVVVCESWK--RYWLKGDRAGIL-DAFI---ENLPGGPDNINLAPDGSFWIGLI 250 (351)
Q Consensus 193 ngi~~~~dg~~lyv~~~~~--~~~i~~~~~~~~-~~~~---~~~~g~pd~i~~d~~G~lwva~~ 250 (351)
..++++++|+.++.+..++ ++|-. ..++. ..+. ....+....++++++|.+.++..
T Consensus 302 ~~~~~s~~g~~l~~g~~dg~i~vwd~--~~~~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~sgs 363 (380)
T 3iz6_a 302 TSVAFSISGRLLFAGYSNGDCYVWDT--LLAEMVLNLGTLQNSHEGRISCLGLSSDGSALCTGS 363 (380)
T ss_dssp SEEEECSSSSEEEEECTTSCEEEEET--TTCCEEEEECCSCSSCCCCCCEEEECSSSSEEEEEC
T ss_pred EEEEECCCCCEEEEEECCCCEEEEEC--CCCceEEEEecccCCCCCceEEEEECCCCCEEEEee
Confidence 6899999999777776666 45521 12221 1111 12223446678999998777654
No 236
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=98.35 E-value=8.6e-05 Score=67.06 Aligned_cols=181 Identities=13% Similarity=0.033 Sum_probs=98.9
Q ss_pred cCCCceEEEeeCCCeEEE-EEc---CCEEEEEEcCCCeEEEEe--ecCCccccceEEcCC---CCEEEEeCCCCeEEEc-
Q 018705 51 VNHPEDVSVVVSKGALYT-ATR---DGWVKYFILHNETLVNWK--HIDSQSLLGLTTTKD---GGVILCDNEKGLLKVT- 120 (351)
Q Consensus 51 ~~~pe~i~~d~~~g~lyv-~~~---~g~I~~~d~~~g~~~~~~--~~~~~p~~gl~~d~~---G~L~v~d~~~gl~~~~- 120 (351)
-....++++.|++..+.+ +.. +|.|..|+..+++..... ....... .+++.++ |+++++....+.+++.
T Consensus 18 ~~~v~~~~~~p~~~~l~~~~s~~~~d~~v~iw~~~~~~~~~~~~~~~~~~v~-~~~~~~~~~~~~~l~~~~~dg~i~iwd 96 (357)
T 3i2n_A 18 NYTVFDCKWVPCSAKFVTMGNFARGTGVIQLYEIQHGDLKLLREIEKAKPIK-CGTFGATSLQQRYLATGDFGGNLHIWN 96 (357)
T ss_dssp SSCEEEEEECTTSSEEEEEEC--CCCEEEEEEEECSSSEEEEEEEEESSCEE-EEECTTCCTTTCCEEEEETTSCEEEEC
T ss_pred CCceEEEEEcCCCceEEEecCccCCCcEEEEEeCCCCcccceeeecccCcEE-EEEEcCCCCCCceEEEecCCCeEEEEe
Confidence 345678999976656554 444 899999998777654332 2234455 8899887 5544443344545554
Q ss_pred C-CC---eEEecCCCCCcccE------EEccCCcEEEEeCCCccCCcccccccccccCCceEEEEeCCCCe--EEEeecC
Q 018705 121 E-EG---VEAIVPDASFTNDV------IAASDGTLYFTVASTKYTPTDFYKDMAEGKPYGQLRKYDPKLKE--TTVLHEG 188 (351)
Q Consensus 121 ~-~g---~~~l~~~~~~~n~l------~~d~dG~ly~t~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~~~--~~~~~~~ 188 (351)
. ++ ...+......++++ +++++|...++.+. +|.|..||..+++ ...+...
T Consensus 97 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~s~~~~~l~~~~~-----------------d~~i~vwd~~~~~~~~~~~~~~ 159 (357)
T 3i2n_A 97 LEAPEMPVYSVKGHKEIINAIDGIGGLGIGEGAPEIVTGSR-----------------DGTVKVWDPRQKDDPVANMEPV 159 (357)
T ss_dssp TTSCSSCSEEECCCSSCEEEEEEESGGGCC-CCCEEEEEET-----------------TSCEEEECTTSCSSCSEEECCC
T ss_pred CCCCCccEEEEEecccceEEEeeccccccCCCccEEEEEeC-----------------CCeEEEEeCCCCCCcceecccc
Confidence 2 22 34444333455555 45678876666543 4678888877654 2222111
Q ss_pred c----cccceEE----EcCCCCEEEEEecceeEEeecCCCCceeEEeccCCCCCCceEECC---CCCEEEEEe
Q 018705 189 F----YFANGIA----LSKNEDFVVVCESWKRYWLKGDRAGILDAFIENLPGGPDNINLAP---DGSFWIGLI 250 (351)
Q Consensus 189 ~----~~~ngi~----~~~dg~~lyv~~~~~~~~i~~~~~~~~~~~~~~~~g~pd~i~~d~---~G~lwva~~ 250 (351)
. .....++ ++++++.++.+..++.+.+-+...++..... ........+.+++ +|++.++..
T Consensus 160 ~~~~~~~v~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~-~~~~~v~~~~~~~~~~~~~~l~~~~ 231 (357)
T 3i2n_A 160 QGENKRDCWTVAFGNAYNQEERVVCAGYDNGDIKLFDLRNMALRWET-NIKNGVCSLEFDRKDISMNKLVATS 231 (357)
T ss_dssp TTSCCCCEEEEEEECCCC-CCCEEEEEETTSEEEEEETTTTEEEEEE-ECSSCEEEEEESCSSSSCCEEEEEE
T ss_pred CCCCCCceEEEEEEeccCCCCCEEEEEccCCeEEEEECccCceeeec-CCCCceEEEEcCCCCCCCCEEEEEC
Confidence 1 1233455 6789987777766553222222223322222 2233345678887 777555543
No 237
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=98.34 E-value=0.00025 Score=66.42 Aligned_cols=143 Identities=10% Similarity=0.135 Sum_probs=93.5
Q ss_pred CCceEEEeeCC--CeEEEEEcCCEEEEEEcCCCeEE----------------------------------------EE-e
Q 018705 53 HPEDVSVVVSK--GALYTATRDGWVKYFILHNETLV----------------------------------------NW-K 89 (351)
Q Consensus 53 ~pe~i~~d~~~--g~lyv~~~~g~I~~~d~~~g~~~----------------------------------------~~-~ 89 (351)
...++++.+++ ..+.++..||.|..|+..+++.. .+ .
T Consensus 95 ~V~~l~~~~~~~~~~l~s~s~d~~i~iw~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (447)
T 3dw8_B 95 KINKIRWLPQKNAAQFLLSTNDKTIKLWKISERDKRPEGYNLKEEDGRYRDPTTVTTLRVPVFRPMDLMVEASPRRIFAN 174 (447)
T ss_dssp CCCEEEECCCCSSSEEEEEECSSCEEEEEEEEEEEEEECCSCC--------CCCCCSCCCCEEEEEEEEEEEEEEEEECS
T ss_pred ceEEEEEcCCCCcceEEEeCCCCeEEEEecccccCCcceecccCccccccCcccccceEeccccchheeeeccceEEecc
Confidence 35689999766 57888999999999987543321 11 1
Q ss_pred ecCCccccceEEcCCCCEEEEeCCCCeEEEcC-C--C--eEEe-------cCCCCCcccEEEccCC-cEEEEeCCCccCC
Q 018705 90 HIDSQSLLGLTTTKDGGVILCDNEKGLLKVTE-E--G--VEAI-------VPDASFTNDVIAASDG-TLYFTVASTKYTP 156 (351)
Q Consensus 90 ~~~~~p~~gl~~d~~G~L~v~d~~~gl~~~~~-~--g--~~~l-------~~~~~~~n~l~~d~dG-~ly~t~~~~~~~~ 156 (351)
....... .+++.++|+++++. ..+.+++.. . + ...+ ......+++++++|+| .++++.+.
T Consensus 175 ~h~~~v~-~~~~~~~~~~l~s~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~----- 247 (447)
T 3dw8_B 175 AHTYHIN-SISINSDYETYLSA-DDLRINLWHLEITDRSFNIVDIKPANMEELTEVITAAEFHPNSCNTFVYSSS----- 247 (447)
T ss_dssp CCSSCCC-EEEECTTSSEEEEE-CSSEEEEEETTEEEEEEEEEECCCSSGGGCCCCEEEEEECSSCTTEEEEEET-----
T ss_pred CCCcceE-EEEEcCCCCEEEEe-CCCeEEEEECCCCCceeeeeecccccccccCcceEEEEECCCCCcEEEEEeC-----
Confidence 1223455 89999999887776 567666663 3 2 2222 1112568899999998 77776654
Q ss_pred cccccccccccCCceEEEEeCCCCeE-----EEeecCcc------------ccceEEEcCCCCEEEEEecce-eEE
Q 018705 157 TDFYKDMAEGKPYGQLRKYDPKLKET-----TVLHEGFY------------FANGIALSKNEDFVVVCESWK-RYW 214 (351)
Q Consensus 157 ~~~~~~~~~~~~~g~l~~~d~~~~~~-----~~~~~~~~------------~~ngi~~~~dg~~lyv~~~~~-~~~ 214 (351)
+|.|..||..+++. ..+..... ....++++|+++.|..+..+. ++|
T Consensus 248 ------------dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~~~v~iw 311 (447)
T 3dw8_B 248 ------------KGTIRLCDMRASALCDRHSKLFEEPEDPSNRSFFSEIISSISDVKFSHSGRYMMTRDYLSVKVW 311 (447)
T ss_dssp ------------TSCEEEEETTTCSSSCTTCEEECCC-----CCHHHHHTTCEEEEEECTTSSEEEEEESSEEEEE
T ss_pred ------------CCeEEEEECcCCccccceeeEeccCCCccccccccccCceEEEEEECCCCCEEEEeeCCeEEEE
Confidence 46788888776653 33332221 567899999999777766633 555
No 238
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=98.34 E-value=0.00033 Score=63.45 Aligned_cols=141 Identities=13% Similarity=0.105 Sum_probs=89.3
Q ss_pred CceEEEeeCCCeEEEEEcCCEEEEEEcCCCeEE---EEee--cCCccccceEEcCCCCEEEEeCCCCeEEEc-CC-----
Q 018705 54 PEDVSVVVSKGALYTATRDGWVKYFILHNETLV---NWKH--IDSQSLLGLTTTKDGGVILCDNEKGLLKVT-EE----- 122 (351)
Q Consensus 54 pe~i~~d~~~g~lyv~~~~g~I~~~d~~~g~~~---~~~~--~~~~p~~gl~~d~~G~L~v~d~~~gl~~~~-~~----- 122 (351)
-.++++++ +.+.++..|+.|..|+..++..+ .+.. ...... .+++.++|+++++....+.+++. ..
T Consensus 17 v~~~~~s~--~~las~~~D~~i~lw~~~~~~~~~~~~~~~~~h~~~v~-~v~~sp~~~~las~s~D~~v~iw~~~~~~~~ 93 (330)
T 2hes_X 17 IWSFDFSQ--GILATGSTDRKIKLVSVKYDDFTLIDVLDETAHKKAIR-SVAWRPHTSLLAAGSFDSTVSIWAKEESADR 93 (330)
T ss_dssp EEEEEEET--TEEEEEESSSCEEEEECSSSCCEEEEEECTTCCCSCEE-EEEECTTSSEEEEEETTSCEEEEEC------
T ss_pred eeeeccCC--CEEEEEcCCCEEEEEEecCCCeEEEEEEecCCccCCEE-EEEECCCCCEEEEEeCCCcEEEEEcccCcCc
Confidence 34677773 38888999999999998665322 2211 223355 89999999877766566666665 21
Q ss_pred ---C--eEEecCCCCCcccEEEccCCcEEEEeCCCccCCcccccccccccCCceEEEEeCC-CC---eE-EEeecCcccc
Q 018705 123 ---G--VEAIVPDASFTNDVIAASDGTLYFTVASTKYTPTDFYKDMAEGKPYGQLRKYDPK-LK---ET-TVLHEGFYFA 192 (351)
Q Consensus 123 ---g--~~~l~~~~~~~n~l~~d~dG~ly~t~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~-~~---~~-~~~~~~~~~~ 192 (351)
. ...+......+++++++|+|...++.+. ++.|..||.. .+ +. ..+...-...
T Consensus 94 ~~~~~~~~~~~~h~~~V~~v~~sp~g~~las~s~-----------------D~~v~iwd~~~~~~~~~~~~~~~~h~~~v 156 (330)
T 2hes_X 94 TFEMDLLAIIEGHENEVKGVAWSNDGYYLATCSR-----------------DKSVWIWETDESGEEYECISVLQEHSQDV 156 (330)
T ss_dssp -CCCEEEEEEC----CEEEEEECTTSCEEEEEET-----------------TSCEEEEECCTTCCCCEEEEEECCCSSCE
T ss_pred cccceeEEEEcCCCCcEEEEEECCCCCEEEEEeC-----------------CCEEEEEeccCCCCCeEEEEEeccCCCce
Confidence 1 1223323367889999999987777654 4678888763 22 22 2222333456
Q ss_pred ceEEEcCCCCEEEEEecce--eEE
Q 018705 193 NGIALSKNEDFVVVCESWK--RYW 214 (351)
Q Consensus 193 ngi~~~~dg~~lyv~~~~~--~~~ 214 (351)
+.++++|+++.|..+..++ ++|
T Consensus 157 ~~v~~~p~~~~l~s~s~D~~i~iW 180 (330)
T 2hes_X 157 KHVIWHPSEALLASSSYDDTVRIW 180 (330)
T ss_dssp EEEEECSSSSEEEEEETTSCEEEE
T ss_pred EEEEECCCCCEEEEEcCCCeEEEE
Confidence 7899999999666666665 666
No 239
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=98.33 E-value=9.6e-05 Score=74.89 Aligned_cols=249 Identities=11% Similarity=0.016 Sum_probs=132.5
Q ss_pred ceEEEeeCCCeEEEEEcC---------CEEEEEEcCCCeEEEEeecCCccccceEEcCCCCEEEEeCCCCeEEEcC-CC-
Q 018705 55 EDVSVVVSKGALYTATRD---------GWVKYFILHNETLVNWKHIDSQSLLGLTTTKDGGVILCDNEKGLLKVTE-EG- 123 (351)
Q Consensus 55 e~i~~d~~~g~lyv~~~~---------g~I~~~d~~~g~~~~~~~~~~~p~~gl~~d~~G~L~v~d~~~gl~~~~~-~g- 123 (351)
.+++++|++..+..+..+ +.++.+|..+|+.+.+........ ..+++|||+..+......|+..+. +|
T Consensus 65 ~~~~~Spdg~~l~~~~~~~~~~r~~~~~~~~~~d~~~~~~~~l~~~~~~~~-~~~~SPdG~~la~~~~~~i~~~~~~~~~ 143 (740)
T 4a5s_A 65 NDYSISPDGQFILLEYNYVKQWRHSYTASYDIYDLNKRQLITEERIPNNTQ-WVTWSPVGHKLAYVWNNDIYVKIEPNLP 143 (740)
T ss_dssp CEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETTTTEECCSSCCCTTEE-EEEECSSTTCEEEEETTEEEEESSTTSC
T ss_pred cceEECCCCCEEEEEECCeeeEEEccceEEEEEECCCCcEEEcccCCCcce-eeEECCCCCEEEEEECCeEEEEECCCCc
Confidence 347889877777765543 667899998887765443334445 778889995333333456666664 55
Q ss_pred eEEecCCC-------------------CCcccEEEccCCc-EEEEe-CCCccCCccccc--------------cc---cc
Q 018705 124 VEAIVPDA-------------------SFTNDVIAASDGT-LYFTV-ASTKYTPTDFYK--------------DM---AE 165 (351)
Q Consensus 124 ~~~l~~~~-------------------~~~n~l~~d~dG~-ly~t~-~~~~~~~~~~~~--------------~~---~~ 165 (351)
.+.+.... .....++++|||. |.+.. ..+. ...+.. .+ ..
T Consensus 144 ~~~lt~~g~~~~~~~g~~~~v~~ee~~~~~~~~~wSpDg~~la~~~~d~~~--v~~~~~~~~~~~~~~~~~~~~~~yp~~ 221 (740)
T 4a5s_A 144 SYRITWTGKEDIIYNGITDWVYEEEVFSAYSALWWSPNGTFLAYAQFNDTE--VPLIEYSFYSDESLQYPKTVRVPYPKA 221 (740)
T ss_dssp CEECCSCCBTTTEEESBCCHHHHHHTSSSSBCEEECTTSSEEEEEEEECTT--CCEEEEEECCSTTCSSCEEEEEECCBT
T ss_pred eEEEcCCCCccceecCcccccccchhcCCCcceEECCCCCEEEEEEEcccC--CceEEEEeecCCCCCCCcceeecCCCC
Confidence 55443211 1123588999995 44432 1110 000000 00 11
Q ss_pred ccC--CceEEEEeCCC---C---eEEEeec------CccccceEEEcCCCCEEEEE-ecce---eEEeecCCCCc-----
Q 018705 166 GKP--YGQLRKYDPKL---K---ETTVLHE------GFYFANGIALSKNEDFVVVC-ESWK---RYWLKGDRAGI----- 222 (351)
Q Consensus 166 ~~~--~g~l~~~d~~~---~---~~~~~~~------~~~~~ngi~~~~dg~~lyv~-~~~~---~~~i~~~~~~~----- 222 (351)
+.. ...|+.+|.++ + +...+.. .......++++|||+.+++. .... .+++-+...++
T Consensus 222 G~~~~~~~l~v~d~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~wspdg~~~~~~~~r~~~~~~i~~~d~~tg~~~~~~ 301 (740)
T 4a5s_A 222 GAVNPTVKFFVVNTDSLSSVTNATSIQITAPASMLIGDHYLCDVTWATQERISLQWLRRIQNYSVMDICDYDESSGRWNC 301 (740)
T ss_dssp TSCCCEEEEEEEETTSCCSSSCCCEEEECCCHHHHTSCEEEEEEEEEETTEEEEEEEESSTTEEEEEEEEEETTTTEEEE
T ss_pred cCcCCeeEEEEEECCCCCCCCcceEEEecCCccCCCCCeEEEEEEEeCCCeEEEEEeCCCCCEEEEEEEECCCCccccce
Confidence 221 23689999987 6 4544432 22334568899999844333 2221 44443322222
Q ss_pred ---eeEEeccCCCC-----CCceEECCCCCEEE-EEecCCchhhhhhhcChhHHHHHHhccchhhcccCCCCCCceEEEE
Q 018705 223 ---LDAFIENLPGG-----PDNINLAPDGSFWI-GLIKMNQTGVRAIQKCREKWELLDAYPGLISLLLPMGSDAGARVVK 293 (351)
Q Consensus 223 ---~~~~~~~~~g~-----pd~i~~d~~G~lwv-a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 293 (351)
.+++.+...+. +....+.+||+.++ ..... .....|..
T Consensus 302 ~~~~~l~~~~~~~~v~~~~~~~p~fspDG~~l~~~~s~~---------------------------------~G~~~l~~ 348 (740)
T 4a5s_A 302 LVARQHIEMSTTGWVGRFRPSEPHFTLDGNSFYKIISNE---------------------------------EGYRHICY 348 (740)
T ss_dssp CGGGCEEEECSSSCSSSSSCCCCEECTTSSEEEEEEECT---------------------------------TSCEEEEE
T ss_pred eEEEEeeeccCCceEccCcCCCceEcCCCCEEEEEEEcC---------------------------------CCceEEEE
Confidence 12222222222 23678899997332 22211 12346888
Q ss_pred EECCCCeEEEEEECCCCCcccceeEEE-EECCEEEEEecC------CCeEEEEeCCCC
Q 018705 294 VDGNDGKIIRDFNDPDATYISFVTSAA-EFDGNLYLASLQ------SNFIGILPLDGP 344 (351)
Q Consensus 294 ~~~~~g~~~~~~~~~~g~~~~~~~~~~-~~~g~L~ig~~~------~~~i~~~~~~~~ 344 (351)
+|. +|+....+.. | .+.+..+. .+++.||+.+.. ...|+++++.+.
T Consensus 349 ~~~-~~~~~~~lT~--g--~~~v~~~~~~d~~~i~f~~~~~~~~~~~~~ly~v~~~g~ 401 (740)
T 4a5s_A 349 FQI-DKKDCTFITK--G--TWEVIGIEALTSDYLYYISNEYKGMPGGRNLYKIQLIDY 401 (740)
T ss_dssp EET-TCSSCEESCC--S--SSCEEEEEEECSSEEEEEESCGGGCTTCBEEEEEETTEE
T ss_pred EEC-CCCceEeccc--C--CEEEEEEEEEeCCEEEEEEecCCCCCceeEEEEEECCCC
Confidence 998 6655544442 2 12344433 457788887754 247888887654
No 240
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=98.32 E-value=9.8e-05 Score=66.81 Aligned_cols=98 Identities=10% Similarity=0.023 Sum_probs=64.1
Q ss_pred cCCCceEEEeeCC---CeEEEEEcCCEEEEEEcCC-CeE--EEEeecCCccccceEEcCCCCEEEEeCCCCeEEEc--CC
Q 018705 51 VNHPEDVSVVVSK---GALYTATRDGWVKYFILHN-ETL--VNWKHIDSQSLLGLTTTKDGGVILCDNEKGLLKVT--EE 122 (351)
Q Consensus 51 ~~~pe~i~~d~~~---g~lyv~~~~g~I~~~d~~~-g~~--~~~~~~~~~p~~gl~~d~~G~L~v~d~~~gl~~~~--~~ 122 (351)
-..-.+++++|++ ..++++..+|.|..|+..+ ++. ..+........ .+++.++|+++++....+.+++. .+
T Consensus 39 ~~~v~~~~~~~~~~~g~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h~~~v~-~~~~~~~~~~l~s~~~dg~v~iwd~~~ 117 (368)
T 3mmy_A 39 DDSIGCLSFSPPTLPGNFLIAGSWANDVRCWEVQDSGQTIPKAQQMHTGPVL-DVCWSDDGSKVFTASCDKTAKMWDLSS 117 (368)
T ss_dssp SSCEEEEEECCTTSSSEEEEEEETTSEEEEEEECTTSCEEEEEEEECSSCEE-EEEECTTSSEEEEEETTSEEEEEETTT
T ss_pred CCceEEEEEcCCCCCceEEEEECCCCcEEEEEcCCCCceeEEEeccccCCEE-EEEECcCCCEEEEEcCCCcEEEEEcCC
Confidence 3455789999764 6778899999999999865 433 23333445566 89999999866655556666665 24
Q ss_pred C-eEEecCCCCCcccEEE--ccCCcEEEEe
Q 018705 123 G-VEAIVPDASFTNDVIA--ASDGTLYFTV 149 (351)
Q Consensus 123 g-~~~l~~~~~~~n~l~~--d~dG~ly~t~ 149 (351)
+ ...+......+.++++ +++|.++++.
T Consensus 118 ~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~ 147 (368)
T 3mmy_A 118 NQAIQIAQHDAPVKTIHWIKAPNYSCVMTG 147 (368)
T ss_dssp TEEEEEEECSSCEEEEEEEECSSCEEEEEE
T ss_pred CCceeeccccCceEEEEEEeCCCCCEEEEc
Confidence 5 3333323356777777 7777644443
No 241
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=98.28 E-value=7.5e-06 Score=79.88 Aligned_cols=183 Identities=10% Similarity=0.056 Sum_probs=108.9
Q ss_pred ceEecCCCcCCCceEEEeeCCCeEEEEEcCC--------------------------------------EEEEEEcCC--
Q 018705 43 LTKLGEGCVNHPEDVSVVVSKGALYTATRDG--------------------------------------WVKYFILHN-- 82 (351)
Q Consensus 43 ~~~i~~~~~~~pe~i~~d~~~g~lyv~~~~g--------------------------------------~I~~~d~~~-- 82 (351)
+..|..+. .|+.++++++++.+|+.+.+. .|..+|..+
T Consensus 188 ~~qI~Vgg--~pd~~~~spdGk~~~vt~~~se~~~~i~~~~~~~~d~v~V~~~~~~~~~v~~Gk~~~i~~V~VID~~~~~ 265 (595)
T 1fwx_A 188 AWQVLVSG--NLDNCDADYEGKWAFSTSYNSEKGMTLPEMTAAEMDHIVVFNIAEIEKAIAAGDYQELNGVKVVDGRKEA 265 (595)
T ss_dssp EEEEEESS--CCCCEEECSSSSEEEEEESCTTCCSSHHHHTCCSEEEEEEEEHHHHHHHHHHTCSEEETTEEEEECSGGG
T ss_pred EEEEEeCC--CccceEECCCCCEEEEEecCcccCcchhhccccccceEEEeeccceeEeccCCCeeEECcEEEEeCcccC
Confidence 34555553 699999999888999977432 366777665
Q ss_pred CeE-EEEeecCCccccceEEcCCCC-EEEEeCCCC-eEEEcCCC-e-----------EEecC-CC-CCcccEEEccCCcE
Q 018705 83 ETL-VNWKHIDSQSLLGLTTTKDGG-VILCDNEKG-LLKVTEEG-V-----------EAIVP-DA-SFTNDVIAASDGTL 145 (351)
Q Consensus 83 g~~-~~~~~~~~~p~~gl~~d~~G~-L~v~d~~~g-l~~~~~~g-~-----------~~l~~-~~-~~~n~l~~d~dG~l 145 (351)
++. ......+..|+ |+.+++||+ +|+++.... +..++-+. . ..... .. ..|..+++++||++
T Consensus 266 ~~~~~~~Ipvg~~Ph-Gv~~sPDGk~v~V~~~~s~~VsVid~~~~~~~~~~~l~~~~~v~~~v~vG~gP~h~aF~~dG~a 344 (595)
T 1fwx_A 266 SSLFTRYIPIANNPH-GCNMAPDKKHLCVAGKLSPTVTVLDVTRFDAVFYENADPRSAVVAEPELGLGPLHTAFDGRGNA 344 (595)
T ss_dssp CCSSEEEEEEESSCC-CEEECTTSSEEEEECTTSSBEEEEEGGGHHHHHHSCCCGGGGEEECCBCCSCEEEEEECTTSEE
T ss_pred CceeEEEEecCCCce-EEEEcCCCCEEEEeCCCCCeEEEEECcccccccccccCcccceEEEcCCCCCcceEEECCCCeE
Confidence 333 33334456899 999999996 777776544 44444221 1 01111 11 68999999999999
Q ss_pred EEEeCCCccCCcccccccccccCCceEEEEeCCC----------CeE-EEeecC-----ccccceEEEcCCCCEEEEEec
Q 018705 146 YFTVASTKYTPTDFYKDMAEGKPYGQLRKYDPKL----------KET-TVLHEG-----FYFANGIALSKNEDFVVVCES 209 (351)
Q Consensus 146 y~t~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~----------~~~-~~~~~~-----~~~~ngi~~~~dg~~lyv~~~ 209 (351)
|++... ++.|.+||.++ .++ ..+.-+ ...+.|+++++||++||++.-
T Consensus 345 Y~t~~l-----------------dsqV~kwdi~~a~~~~~g~~~~~vi~kidV~yqpGh~~~~~g~t~~~DGk~l~~~Nk 407 (595)
T 1fwx_A 345 YTSLFL-----------------DSQVVKWNIEDAIRAYAGEKVDPIKDKLDVHYQPGHLKTVMGETLDATNDWLVCLSK 407 (595)
T ss_dssp EEEETT-----------------TTEEEEEEHHHHHHHHHTCSCCCEEEEEECSSCEEEEEETTTTSTTCCSSEEEEEES
T ss_pred EEEEec-----------------CCcEEEEEhhHhhhhhcccccceeEEEeecccccccceeccceEeCCCCCEEEEcCC
Confidence 988754 34566665433 122 222111 223467889999999999875
Q ss_pred ce--eE-----------EeecCCCCceeEEecc-CCCCCCceEECCCCCE
Q 018705 210 WK--RY-----------WLKGDRAGILDAFIEN-LPGGPDNINLAPDGSF 245 (351)
Q Consensus 210 ~~--~~-----------~i~~~~~~~~~~~~~~-~~g~pd~i~~d~~G~l 245 (351)
.. || .+-+-..++.++..+. ..+.|....+++...|
T Consensus 408 ~skdr~~~~gp~~~~~~ql~dis~~~m~lv~d~p~~~ePh~~~i~~~~~~ 457 (595)
T 1fwx_A 408 FSKDRFLNVGPLKPENDQLIDISGDKMVLVHDGPTFAEPHDAIAVHPSIL 457 (595)
T ss_dssp CCTTSSCCCCSSCCEEEEEEECSSSSCEEEEEEEESSCCCCEEEECTTTT
T ss_pred CCccccccCCCCCCCcceEEEcCCCcEEEEEEEcCCCCCCceEEccHHHc
Confidence 44 44 2221122233333221 1245777777766544
No 242
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=98.27 E-value=0.00012 Score=73.45 Aligned_cols=193 Identities=10% Similarity=0.024 Sum_probs=104.8
Q ss_pred CceEEEeeCCCeEEEEEcC---------CEEEEEEcCCCeEEEEeecCC---ccccceEEcCCCCEEEEeCCCCeEEEcC
Q 018705 54 PEDVSVVVSKGALYTATRD---------GWVKYFILHNETLVNWKHIDS---QSLLGLTTTKDGGVILCDNEKGLLKVTE 121 (351)
Q Consensus 54 pe~i~~d~~~g~lyv~~~~---------g~I~~~d~~~g~~~~~~~~~~---~p~~gl~~d~~G~L~v~d~~~gl~~~~~ 121 (351)
..+++++|++..+..+..+ +.|+.+|..+++.+.+..... .+. .+++++||+.++......++.++.
T Consensus 63 v~~~~~SpDg~~l~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~~~~~~~-~~~~SPdG~~la~~~~~~i~~~~~ 141 (723)
T 1xfd_A 63 AIRYEISPDREYALFSYNVEPIYQHSYTGYYVLSKIPHGDPQSLDPPEVSNAKLQ-YAGWGPKGQQLIFIFENNIYYCAH 141 (723)
T ss_dssp CSEEEECTTSSEEEEEESCCCCSSSCCCSEEEEEESSSCCCEECCCTTCCSCCCS-BCCBCSSTTCEEEEETTEEEEESS
T ss_pred cceEEECCCCCEEEEEecCccceeecceeeEEEEECCCCceEeccCCcccccccc-ccEECCCCCEEEEEECCeEEEEEC
Confidence 6789999877777666542 788999998887655433222 255 788999995443333356777774
Q ss_pred -CC-eEEecCC-CC------------------CcccEEEccCCc-EEEEeCCCccCCcccc------------ccc-c--
Q 018705 122 -EG-VEAIVPD-AS------------------FTNDVIAASDGT-LYFTVASTKYTPTDFY------------KDM-A-- 164 (351)
Q Consensus 122 -~g-~~~l~~~-~~------------------~~n~l~~d~dG~-ly~t~~~~~~~~~~~~------------~~~-~-- 164 (351)
+| ...+... .. ...+++++|||+ |.++.... -....+. ..+ +
T Consensus 142 ~~g~~~~~~~~~~~~~~~~g~~~~v~~ee~~~~~~~~~~SpDg~~la~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 220 (723)
T 1xfd_A 142 VGKQAIRVVSTGKEGVIYNGLSDWLYEEEILKTHIAHWWSPDGTRLAYAAIND-SRVPIMELPTYTGSIYPTVKPYHYPK 220 (723)
T ss_dssp SSSCCEEEECCCBTTTEEEEECCHHHHHTTSSSSEEEEECTTSSEEEEEEEEC-TTSCEEEECCCSSSSSCCCEEEECCB
T ss_pred CCCceEEEecCCCCCceECcccceeEEEEeccCcceEEECCCCCEEEEEEECC-CccceEEeeccCCcCCCcceeccCCC
Confidence 55 4443322 11 236799999996 44433110 0000000 000 0
Q ss_pred cc--cCCceEEEEeCCCCeE-EEeecC------ccccceEEEcCCCCEEEEEecc-e---eEEeecCCCCceeEE-eccC
Q 018705 165 EG--KPYGQLRKYDPKLKET-TVLHEG------FYFANGIALSKNEDFVVVCESW-K---RYWLKGDRAGILDAF-IENL 230 (351)
Q Consensus 165 ~~--~~~g~l~~~d~~~~~~-~~~~~~------~~~~ngi~~~~dg~~lyv~~~~-~---~~~i~~~~~~~~~~~-~~~~ 230 (351)
.+ .....|+.||..+++. ..+... ......++++|||+.+++.... . .+++-+...++.... ....
T Consensus 221 ~G~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~ 300 (723)
T 1xfd_A 221 AGSENPSISLHVIGLNGPTHDLEMMPPDDPRMREYYITMVKWATSTKVAVTWLNRAQNVSILTLCDATTGVCTKKHEDES 300 (723)
T ss_dssp TTSCCCEEEEEEEESSSSCCCEECCCCCCGGGSSEEEEEEEESSSSEEEEEEEETTSCEEEEEEEETTTCCEEEEEEEEC
T ss_pred CCCCCCeeEEEEEECCCCceeEEeeCCccCCCccceeEEEEEeCCCeEEEEEEcCCCCeEEEEEEeCCCCcceEEEEecc
Confidence 01 1123689999887763 333321 1234568999999866444322 1 444444333443322 2212
Q ss_pred CCC----CCceEECCCCC-EEEE
Q 018705 231 PGG----PDNINLAPDGS-FWIG 248 (351)
Q Consensus 231 ~g~----pd~i~~d~~G~-lwva 248 (351)
.+. +..++++++|+ |++.
T Consensus 301 ~~~~~~~~~~~~~spdg~~l~~~ 323 (723)
T 1xfd_A 301 EAWLHRQNEEPVFSKDGRKFFFI 323 (723)
T ss_dssp SSCCCCCCCCCEECTTSCSEEEE
T ss_pred CCEEeccCCCceEcCCCCeEEEE
Confidence 222 23678999997 4443
No 243
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=98.25 E-value=0.0002 Score=65.81 Aligned_cols=145 Identities=10% Similarity=-0.022 Sum_probs=88.8
Q ss_pred CCCcCCCceEEEee-CCCeEEEEEcCCEEEEEEcCCCeEEEEe--------------ecCCccccceEEcC-CCCEEEEe
Q 018705 48 EGCVNHPEDVSVVV-SKGALYTATRDGWVKYFILHNETLVNWK--------------HIDSQSLLGLTTTK-DGGVILCD 111 (351)
Q Consensus 48 ~~~~~~pe~i~~d~-~~g~lyv~~~~g~I~~~d~~~g~~~~~~--------------~~~~~p~~gl~~d~-~G~L~v~d 111 (351)
.+.-..-.+++++| ++..++++..+|.|..|+..+++..... ....... .+++.+ +++++++.
T Consensus 40 ~~h~~~v~~~~~s~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~-~~~~~~~~~~~l~s~ 118 (408)
T 4a11_B 40 RIHGGGINTLDIEPVEGRYMLSGGSDGVIVLYDLENSSRQSYYTCKAVCSIGRDHPDVHRYSVE-TVQWYPHDTGMFTSS 118 (408)
T ss_dssp CCCSSCEEEEEECTTTCCEEEEEETTSCEEEEECCCCSSSSCEEECEEEEECTTCTTCCSSCEE-EEEECTTCTTCEEEE
T ss_pred eccCCcEEEEEEecCCCCEEEEEcCCCeEEEEECCCCcccceEeccccccccccccccCCCcEE-EEEEccCCCcEEEEE
Confidence 33334556899997 6778889999999999998765331111 1223455 899988 66565554
Q ss_pred CCCCeEEEc-C-CC--eEEecCCCCCcccEEEccC---CcEEEEeCCCccCCcccccccccccCCceEEEEeCCCCeEEE
Q 018705 112 NEKGLLKVT-E-EG--VEAIVPDASFTNDVIAASD---GTLYFTVASTKYTPTDFYKDMAEGKPYGQLRKYDPKLKETTV 184 (351)
Q Consensus 112 ~~~gl~~~~-~-~g--~~~l~~~~~~~n~l~~d~d---G~ly~t~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~~~~~~ 184 (351)
...+.+++. . ++ ...+.. ...+..+.+.+. +.+.++... +|.|..||..+++...
T Consensus 119 ~~d~~i~iwd~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~-----------------~~~v~~~d~~~~~~~~ 180 (408)
T 4a11_B 119 SFDKTLKVWDTNTLQTADVFNF-EETVYSHHMSPVSTKHCLVAVGTR-----------------GPKVQLCDLKSGSCSH 180 (408)
T ss_dssp ETTSEEEEEETTTTEEEEEEEC-SSCEEEEEECSSCSSCCEEEEEES-----------------SSSEEEEESSSSCCCE
T ss_pred eCCCeEEEeeCCCCccceeccC-CCceeeeEeecCCCCCcEEEEEcC-----------------CCeEEEEeCCCcceee
Confidence 455656655 3 44 333322 245566676663 335544432 4678899877665433
Q ss_pred -eecCccccceEEEcCCCCE-EEEEecce
Q 018705 185 -LHEGFYFANGIALSKNEDF-VVVCESWK 211 (351)
Q Consensus 185 -~~~~~~~~ngi~~~~dg~~-lyv~~~~~ 211 (351)
+.........++++|+++. ++.+..++
T Consensus 181 ~~~~~~~~v~~~~~~~~~~~ll~~~~~dg 209 (408)
T 4a11_B 181 ILQGHRQEILAVSWSPRYDYILATASADS 209 (408)
T ss_dssp EECCCCSCEEEEEECSSCTTEEEEEETTS
T ss_pred eecCCCCcEEEEEECCCCCcEEEEEcCCC
Confidence 2223345678999999984 55565555
No 244
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=98.24 E-value=8.2e-05 Score=73.96 Aligned_cols=155 Identities=16% Similarity=0.166 Sum_probs=97.0
Q ss_pred CCceEEEeeCCCeEEEEEcC----------CEEEEEEcCC------CeEEEEe-ecCCccccceEEcCCCC-EEEEeCC-
Q 018705 53 HPEDVSVVVSKGALYTATRD----------GWVKYFILHN------ETLVNWK-HIDSQSLLGLTTTKDGG-VILCDNE- 113 (351)
Q Consensus 53 ~pe~i~~d~~~g~lyv~~~~----------g~I~~~d~~~------g~~~~~~-~~~~~p~~gl~~d~~G~-L~v~d~~- 113 (351)
...+++|+|++..|+....+ ..|++++..+ ++.+.+. ....... .+++++||+ |+++...
T Consensus 131 ~~~~~~~spDg~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~-~~~~SpDG~~la~~~~~~ 209 (662)
T 3azo_A 131 RWADPVLLPERGEVWCMAEEFTGEGPSDVRRFLAAVPLDGSAAADRSAVRELSDDAHRFVT-GPRLSPDGRQAVWLAWDH 209 (662)
T ss_dssp EEEEEEEETTTTEEEEEEEEECSSSTTCEEEEEEEEETTSTTTTCGGGSEESSCSCSSEEC-CCEECTTSSEEEEEEECT
T ss_pred cccCcEECCCCCEEEEEEecccCCCCCCceeEEEEEECCCCccccCCceeEEEecCCCccc-CceECCCCCEEEEEECCC
Confidence 34578999888777766544 5799999877 6666554 3334456 889999996 4444322
Q ss_pred -------CCeEEEc-C-CC----eEEecCC-CCCcccEEEccCCcEEEEeCCCccCCcccccccccccCCceEEEEeCCC
Q 018705 114 -------KGLLKVT-E-EG----VEAIVPD-ASFTNDVIAASDGTLYFTVASTKYTPTDFYKDMAEGKPYGQLRKYDPKL 179 (351)
Q Consensus 114 -------~gl~~~~-~-~g----~~~l~~~-~~~~n~l~~d~dG~ly~t~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~ 179 (351)
..++.++ . +| .+.+... ...+..++++|||++|++.... ....|+++|.++
T Consensus 210 ~~~~~~~~~i~~~d~~~~g~~~~~~~l~~~~~~~~~~~~~spdg~l~~~~~~~---------------~~~~l~~~~~~~ 274 (662)
T 3azo_A 210 PRMPWEGTELKTARVTEDGRFADTRTLLGGPEEAIAQAEWAPDGSLIVATDRT---------------GWWNLHRVDPAT 274 (662)
T ss_dssp TCCTTTCEEEEEEEECTTSCEEEEEEEEEETTBCEEEEEECTTSCEEEEECTT---------------SSCEEEEECTTT
T ss_pred CCCCCCCcEEEEEEECCCCcccccEEeCCCCCceEcceEECCCCeEEEEECCC---------------CCeEEEEEECCC
Confidence 2466665 3 34 2223322 2567788999999988776431 123799999877
Q ss_pred CeEEEeecCc-cc--------cceEEEcCCCCEEEEEecce--eEEeecCCCCcee
Q 018705 180 KETTVLHEGF-YF--------ANGIALSKNEDFVVVCESWK--RYWLKGDRAGILD 224 (351)
Q Consensus 180 ~~~~~~~~~~-~~--------~ngi~~~~dg~~lyv~~~~~--~~~i~~~~~~~~~ 224 (351)
++.+.+...- .. ...++++++++.++.+.. + ++|..+...+..+
T Consensus 275 ~~~~~l~~~~~~~~~p~w~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~d~~~~~~~ 329 (662)
T 3azo_A 275 GAATQLCRREEEFAGPLWTPGMRWFAPLANGLIAVVHGK-GAAVLGILDPESGELV 329 (662)
T ss_dssp CCEEESSCCSSBSSCCCCSTTCCSEEECTTSCEEEEEBS-SSCEEEEEETTTTEEE
T ss_pred CceeecccccccccCccccccCceEeEeCCCEEEEEEEc-CccEEEEEECCCCcEE
Confidence 7776654321 11 346888899986666555 5 6665443333433
No 245
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=98.21 E-value=0.004 Score=58.59 Aligned_cols=231 Identities=13% Similarity=0.083 Sum_probs=122.5
Q ss_pred CCCceEEEeeCCCeEEEEEcCCEEEEEEcCCCeEEE-EeecCCccccceEEc--CCCCEEEEeCCCCeEEEc--CCC--e
Q 018705 52 NHPEDVSVVVSKGALYTATRDGWVKYFILHNETLVN-WKHIDSQSLLGLTTT--KDGGVILCDNEKGLLKVT--EEG--V 124 (351)
Q Consensus 52 ~~pe~i~~d~~~g~lyv~~~~g~I~~~d~~~g~~~~-~~~~~~~p~~gl~~d--~~G~L~v~d~~~gl~~~~--~~g--~ 124 (351)
....++++. .++.+.++..||.|..||..+++... +........ .+++. +++.++++....+.+++. +++ .
T Consensus 163 ~~V~~l~~~-~~~~l~s~s~dg~i~vwd~~~~~~~~~~~~h~~~v~-~l~~~~~~~~~~l~s~s~d~~i~vwd~~~~~~~ 240 (464)
T 3v7d_B 163 GGVWALKYA-HGGILVSGSTDRTVRVWDIKKGCCTHVFEGHNSTVR-CLDIVEYKNIKYIVTGSRDNTLHVWKLPKESSV 240 (464)
T ss_dssp SCEEEEEEC-STTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEE-EEEEEESSSCEEEEEEETTSCEEEEECCCCCCC
T ss_pred cCEEEEEEc-CCCEEEEEeCCCCEEEEECCCCcEEEEECCCCCccE-EEEEecCCCCCEEEEEcCCCcEEEeeCCCCccc
Confidence 445678887 45688899999999999998886543 332334445 67776 566655544444555554 222 1
Q ss_pred EEecCCC---------------------CCcccEEEccCCcEEEEeCCCccCCcccccccccccCCceEEEEeCCCCeEE
Q 018705 125 EAIVPDA---------------------SFTNDVIAASDGTLYFTVASTKYTPTDFYKDMAEGKPYGQLRKYDPKLKETT 183 (351)
Q Consensus 125 ~~l~~~~---------------------~~~n~l~~d~dG~ly~t~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~~~~~ 183 (351)
....... ....-.+++++|.+.++.+ .+|.|..||..+++..
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~-----------------~d~~i~vwd~~~~~~~ 303 (464)
T 3v7d_B 241 PDHGEEHDYPLVFHTPEENPYFVGVLRGHMASVRTVSGHGNIVVSGS-----------------YDNTLIVWDVAQMKCL 303 (464)
T ss_dssp ------CCSSEEESCGGGCTTEEEEECCCSSCEEEEEEETTEEEEEE-----------------TTSCEEEEETTTTEEE
T ss_pred ccccccCCcceEeeccCCCeEEEEEccCccceEEEEcCCCCEEEEEe-----------------CCCeEEEEECCCCcEE
Confidence 1110000 0111112344454444332 2578999998877654
Q ss_pred Eeec-CccccceEEEcCCCCEEEEEecce--eEEeecCCCCceeEEeccCCCCCCceEECCCCCEEEEEecCCchhhhhh
Q 018705 184 VLHE-GFYFANGIALSKNEDFVVVCESWK--RYWLKGDRAGILDAFIENLPGGPDNINLAPDGSFWIGLIKMNQTGVRAI 260 (351)
Q Consensus 184 ~~~~-~~~~~ngi~~~~dg~~lyv~~~~~--~~~i~~~~~~~~~~~~~~~~g~pd~i~~d~~G~lwva~~~~~~~~~~~~ 260 (351)
.... .......++++++++.++.+..++ ++| +...++..............+.++ +++.++...
T Consensus 304 ~~~~~~~~~v~~~~~~~~~~~l~sg~~dg~i~vw--d~~~~~~~~~~~~h~~~v~~~~~~--~~~l~s~s~--------- 370 (464)
T 3v7d_B 304 YILSGHTDRIYSTIYDHERKRCISASMDTTIRIW--DLENGELMYTLQGHTALVGLLRLS--DKFLVSAAA--------- 370 (464)
T ss_dssp EEECCCSSCEEEEEEETTTTEEEEEETTSCEEEE--ETTTTEEEEEECCCSSCEEEEEEC--SSEEEEEET---------
T ss_pred EEecCCCCCEEEEEEcCCCCEEEEEeCCCcEEEE--ECCCCcEEEEEeCCCCcEEEEEEc--CCEEEEEeC---------
Confidence 4332 334567899999999787777666 444 222233211111222223445565 455444332
Q ss_pred hcChhHHHHHHhccchhhcccCCCCCCceEEEEEECCCCeEEEEEECCCCCcccceeEEEEECCEEEEEecCCCeEEEEe
Q 018705 261 QKCREKWELLDAYPGLISLLLPMGSDAGARVVKVDGNDGKIIRDFNDPDATYISFVTSAAEFDGNLYLASLQSNFIGILP 340 (351)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~g~~~~~~~~~~g~~~~~~~~~~~~~g~L~ig~~~~~~i~~~~ 340 (351)
.+.|..+|..+++....++.... .....+...+..|..|+ .+.|..++
T Consensus 371 ---------------------------dg~v~vwd~~~~~~~~~~~~~~~---~~~~~~~~~~~~l~~~~--dg~i~iwd 418 (464)
T 3v7d_B 371 ---------------------------DGSIRGWDANDYSRKFSYHHTNL---SAITTFYVSDNILVSGS--ENQFNIYN 418 (464)
T ss_dssp ---------------------------TSEEEEEETTTCCEEEEEECTTC---CCEEEEEECSSEEEEEE--TTEEEEEE
T ss_pred ---------------------------CCcEEEEECCCCceeeeecCCCC---ccEEEEEeCCCEEEEec--CCeEEEEE
Confidence 23566777755555555543221 11222223344444444 57788888
Q ss_pred CCCCCC
Q 018705 341 LDGPEP 346 (351)
Q Consensus 341 ~~~~~~ 346 (351)
+.+.++
T Consensus 419 ~~~g~~ 424 (464)
T 3v7d_B 419 LRSGKL 424 (464)
T ss_dssp TTTCCE
T ss_pred CCCCcE
Confidence 776543
No 246
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=98.20 E-value=0.004 Score=58.11 Aligned_cols=232 Identities=11% Similarity=0.066 Sum_probs=132.1
Q ss_pred CCceEEEeeCCCeEEEEEcCCEEEEEEcCCCeEEEEee---cCCccccceEEcCCCCEEEEeCCCCeEEEc--CCC--eE
Q 018705 53 HPEDVSVVVSKGALYTATRDGWVKYFILHNETLVNWKH---IDSQSLLGLTTTKDGGVILCDNEKGLLKVT--EEG--VE 125 (351)
Q Consensus 53 ~pe~i~~d~~~g~lyv~~~~g~I~~~d~~~g~~~~~~~---~~~~p~~gl~~d~~G~L~v~d~~~gl~~~~--~~g--~~ 125 (351)
....|+|+ .++.|-++. |+.|+.||..+|+...... ...... .+++.++|+++++....+.++++ .++ +.
T Consensus 107 y~~~l~wS-~~n~lAvgl-d~tV~lWd~~tg~~~~~~~~~~~~~~V~-sv~fspdg~~lasgs~Dg~v~iWd~~~~~~~~ 183 (420)
T 4gga_A 107 YLNLVDWS-SGNVLAVAL-DNSVYLWSASSGDILQLLQMEQPGEYIS-SVAWIKEGNYLAVGTSSAEVQLWDVQQQKRLR 183 (420)
T ss_dssp TCBCEEEC-TTSEEEEEE-TTEEEEEETTTCCEEEEEECCSTTCCEE-EEEECTTSSEEEEEETTSCEEEEETTTTEEEE
T ss_pred cceeEEEC-CCCEEEEEe-CCEEEEEECCCCCEEEEEEecCCCCcEE-EEEECCCCCEEEEEECCCeEEEEEcCCCcEEE
Confidence 34568888 567777776 8899999998987754332 223356 89999999877665566666666 355 44
Q ss_pred EecCCCCCcccEEEccCCcEEEEeCCCccCCcccccccccccCCceEEEEeCCCCe--EEEeecCccccceEEEcCCCCE
Q 018705 126 AIVPDASFTNDVIAASDGTLYFTVASTKYTPTDFYKDMAEGKPYGQLRKYDPKLKE--TTVLHEGFYFANGIALSKNEDF 203 (351)
Q Consensus 126 ~l~~~~~~~n~l~~d~dG~ly~t~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~~~--~~~~~~~~~~~ngi~~~~dg~~ 203 (351)
.+......+. +++.++.+.++.+. ++.+..+|..... +..+........++.++++++.
T Consensus 184 ~~~~h~~~v~--~~s~~~~~l~sgs~-----------------d~~i~~~d~~~~~~~~~~~~~h~~~~~~~~~~~~g~~ 244 (420)
T 4gga_A 184 NMTSHSARVG--SLSWNSYILSSGSR-----------------SGHIHHHDVRVAEHHVATLSGHSQEVCGLRWAPDGRH 244 (420)
T ss_dssp EECCCSSCEE--EEEEETTEEEEEET-----------------TSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSSE
T ss_pred EEeCCCCceE--EEeeCCCEEEEEeC-----------------CCceeEeeecccceeeEEecccccceeeeeecCCCCe
Confidence 4433323333 34455666655443 4567777755432 2333344456678899999997
Q ss_pred EEEEecce--eEEeecC-CCCc--eeEEeccCCCCCCceEECCCCC-EEEEEecCCchhhhhhhcChhHHHHHHhccchh
Q 018705 204 VVVCESWK--RYWLKGD-RAGI--LDAFIENLPGGPDNINLAPDGS-FWIGLIKMNQTGVRAIQKCREKWELLDAYPGLI 277 (351)
Q Consensus 204 lyv~~~~~--~~~i~~~-~~~~--~~~~~~~~~g~pd~i~~d~~G~-lwva~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 277 (351)
+..+..++ ++|-... .... ..... ...+....+++.+.+. +.+....
T Consensus 245 l~s~~~D~~v~i~~~~~~~~~~~~~~~~~-~~~~~V~~~~~~p~~~~~la~~~g-------------------------- 297 (420)
T 4gga_A 245 LASGGNDNLVNVWPSAPGEGGWVPLQTFT-QHQGAVKAVAWCPWQSNVLATGGG-------------------------- 297 (420)
T ss_dssp EEEEETTSCEEEEESSCCSSCSCCSEEEC-CCSSCEEEEEECTTCTTEEEEEEC--------------------------
T ss_pred eeeeeccccceEEeeccccccceeeeeec-ccCCceeeeeeCCCcccEEEEEee--------------------------
Confidence 76666665 4543211 1111 11111 1122223456666553 4333221
Q ss_pred hcccCCCCCCceEEEEEECCCCeEEEEEECCCCCcccceeEEEE--ECCEEEEEec-CCCeEEEEeCCCCCC
Q 018705 278 SLLLPMGSDAGARVVKVDGNDGKIIRDFNDPDATYISFVTSAAE--FDGNLYLASL-QSNFIGILPLDGPEP 346 (351)
Q Consensus 278 ~~~~~~~~~~~~~v~~~~~~~g~~~~~~~~~~g~~~~~~~~~~~--~~g~L~ig~~-~~~~i~~~~~~~~~~ 346 (351)
...+.|..+|..+|+....+.... .+.++.. .++.|..++. ..+.|..+++++-++
T Consensus 298 --------s~D~~I~iwd~~t~~~~~~~~~~~-----~v~~~~~~~~~~~lv~~sg~~d~~I~iwd~~~~~~ 356 (420)
T 4gga_A 298 --------TSDRHIRIWNVCSGACLSAVDAHS-----QVCSILWSPHYKELISGHGFAQNQLVIWKYPTMAK 356 (420)
T ss_dssp --------TTTCEEEEEETTTTEEEEEEECSS-----CEEEEEEETTTTEEEEEECTTTCCEEEEETTTCCE
T ss_pred --------cCCCEEEEEeCCccccceeecccc-----ceeeeeecCCCCeEEEEEecCCCEEEEEECCCCcE
Confidence 223456667876777777665432 2444443 3456766653 346688888766543
No 247
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=98.20 E-value=0.00012 Score=77.24 Aligned_cols=147 Identities=10% Similarity=0.095 Sum_probs=94.5
Q ss_pred CceEEEeeCCCeEEEEEcCCEEE-EEEcCCCeEEEEeecCCccccceEEcCCCCEE-EEeCCCCeEEEcC-CC-eEEec-
Q 018705 54 PEDVSVVVSKGALYTATRDGWVK-YFILHNETLVNWKHIDSQSLLGLTTTKDGGVI-LCDNEKGLLKVTE-EG-VEAIV- 128 (351)
Q Consensus 54 pe~i~~d~~~g~lyv~~~~g~I~-~~d~~~g~~~~~~~~~~~p~~gl~~d~~G~L~-v~d~~~gl~~~~~-~g-~~~l~- 128 (351)
..+++|. ++..++....+++++ .++..+++.+.+......+. .++++++|+.+ ++.....++.++. +| ...+.
T Consensus 340 ~~~~~~s-dg~~l~~~s~~~~l~~~~d~~~~~~~~l~~~~~~~~-~~~~SpDG~~la~~~~~~~v~~~d~~tg~~~~~~~ 417 (1045)
T 1k32_A 340 YVRRGGD-TKVAFIHGTREGDFLGIYDYRTGKAEKFEENLGNVF-AMGVDRNGKFAVVANDRFEIMTVDLETGKPTVIER 417 (1045)
T ss_dssp EEEECSS-SEEEEEEEETTEEEEEEEETTTCCEEECCCCCCSEE-EEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEE
T ss_pred EEeeeEc-CCCeEEEEECCCceEEEEECCCCCceEecCCcccee-eeEECCCCCEEEEECCCCeEEEEECCCCceEEecc
Confidence 3456666 555666656677899 89987777665553335567 89999999754 4554445666664 66 44443
Q ss_pred CCCCCcccEEEccCCcEE-EEeCCCccCCcccccccccccCCceEEEEeCCCCeEEEeecCccccceEEEcCCCCEEEEE
Q 018705 129 PDASFTNDVIAASDGTLY-FTVASTKYTPTDFYKDMAEGKPYGQLRKYDPKLKETTVLHEGFYFANGIALSKNEDFVVVC 207 (351)
Q Consensus 129 ~~~~~~n~l~~d~dG~ly-~t~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~~~~~~~~~~~~~~ngi~~~~dg~~lyv~ 207 (351)
.....+.+++++|||+.. ++.....+.. .....+.|+.||.++++...+.........++++|||+.||+.
T Consensus 418 ~~~~~v~~~~~SpDG~~la~~~~~~~~~~--------~~~~~~~i~l~d~~~g~~~~l~~~~~~~~~~~~spdG~~l~~~ 489 (1045)
T 1k32_A 418 SREAMITDFTISDNSRFIAYGFPLKHGET--------DGYVMQAIHVYDMEGRKIFAATTENSHDYAPAFDADSKNLYYL 489 (1045)
T ss_dssp CSSSCCCCEEECTTSCEEEEEEEECSSTT--------CSCCEEEEEEEETTTTEEEECSCSSSBEEEEEECTTSCEEEEE
T ss_pred CCCCCccceEECCCCCeEEEEecCccccc--------cCCCCCeEEEEECCCCcEEEeeCCCcccCCceEcCCCCEEEEE
Confidence 333556889999999743 3322100000 0011347999999888866665555566779999999988887
Q ss_pred ecc
Q 018705 208 ESW 210 (351)
Q Consensus 208 ~~~ 210 (351)
...
T Consensus 490 s~~ 492 (1045)
T 1k32_A 490 SYR 492 (1045)
T ss_dssp ESC
T ss_pred ecc
Confidence 653
No 248
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=98.20 E-value=0.00015 Score=76.49 Aligned_cols=173 Identities=9% Similarity=0.024 Sum_probs=106.7
Q ss_pred ceEEEeeCCCeEEEEEcCCEEEEEEcCCCeEEEEeec-----------CCccccceEEc-CCCC-EEEEeCCCCeEEEcC
Q 018705 55 EDVSVVVSKGALYTATRDGWVKYFILHNETLVNWKHI-----------DSQSLLGLTTT-KDGG-VILCDNEKGLLKVTE 121 (351)
Q Consensus 55 e~i~~d~~~g~lyv~~~~g~I~~~d~~~g~~~~~~~~-----------~~~p~~gl~~d-~~G~-L~v~d~~~gl~~~~~ 121 (351)
..++++|++..+..+ .++.|+.++...+++..+... ...+. .++++ ++|+ |.++. ...++.++.
T Consensus 248 ~~~~~SpDG~~la~~-~~~~i~~~d~~~~~l~~l~~~~~~~~~~~~~~~~~v~-~~~~S~pdG~~la~~~-~~~i~~~~~ 324 (1045)
T 1k32_A 248 YPRHLNTDGRRILFS-KGGSIYIFNPDTEKIEKIEIGDLESPEDRIISIPSKF-AEDFSPLDGDLIAFVS-RGQAFIQDV 324 (1045)
T ss_dssp CEEEEEESSSCEEEE-ETTEEEEECTTTCCEEECCCCCCCBCCSEEEECGGGG-EEEEEECGGGCEEEEE-TTEEEEECT
T ss_pred ceeeEcCCCCEEEEE-eCCEEEEecCCceEeeeeccCcccccccccccccccc-eeeecCCCCCEEEEEE-cCEEEEEcC
Confidence 466888766655554 578899998755555433221 12356 89999 9996 44444 445666664
Q ss_pred -CC-eEEecCCCC-CcccEEEccCCc-EEEEeCCCccCCcccccccccccCCceEE-EEeCCCCeEEEeecCccccceEE
Q 018705 122 -EG-VEAIVPDAS-FTNDVIAASDGT-LYFTVASTKYTPTDFYKDMAEGKPYGQLR-KYDPKLKETTVLHEGFYFANGIA 196 (351)
Q Consensus 122 -~g-~~~l~~~~~-~~n~l~~d~dG~-ly~t~~~~~~~~~~~~~~~~~~~~~g~l~-~~d~~~~~~~~~~~~~~~~ngi~ 196 (351)
++ ...+..... .+.+++++ ||. +++... .+.++ .++..+++.+.+.........++
T Consensus 325 ~~~~~~~~~~~~~~~~~~~~~s-dg~~l~~~s~------------------~~~l~~~~d~~~~~~~~l~~~~~~~~~~~ 385 (1045)
T 1k32_A 325 SGTYVLKVPEPLRIRYVRRGGD-TKVAFIHGTR------------------EGDFLGIYDYRTGKAEKFEENLGNVFAMG 385 (1045)
T ss_dssp TSSBEEECSCCSCEEEEEECSS-SEEEEEEEET------------------TEEEEEEEETTTCCEEECCCCCCSEEEEE
T ss_pred CCCceEEccCCCcceEEeeeEc-CCCeEEEEEC------------------CCceEEEEECCCCCceEecCCccceeeeE
Confidence 45 444433323 56677888 874 443322 24788 89988777766553335567899
Q ss_pred EcCCCCEEEEEecceeEEeecCCCCceeEEeccCCCCCCceEECCCCCEEEEE
Q 018705 197 LSKNEDFVVVCESWKRYWLKGDRAGILDAFIENLPGGPDNINLAPDGSFWIGL 249 (351)
Q Consensus 197 ~~~dg~~lyv~~~~~~~~i~~~~~~~~~~~~~~~~g~pd~i~~d~~G~lwva~ 249 (351)
++|||+.|+++...+.+++-+...++.........+....++++++|+..+..
T Consensus 386 ~SpDG~~la~~~~~~~v~~~d~~tg~~~~~~~~~~~~v~~~~~SpDG~~la~~ 438 (1045)
T 1k32_A 386 VDRNGKFAVVANDRFEIMTVDLETGKPTVIERSREAMITDFTISDNSRFIAYG 438 (1045)
T ss_dssp ECTTSSEEEEEETTSEEEEEETTTCCEEEEEECSSSCCCCEEECTTSCEEEEE
T ss_pred ECCCCCEEEEECCCCeEEEEECCCCceEEeccCCCCCccceEECCCCCeEEEE
Confidence 99999988877766544333333444443432333444678999999855443
No 249
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=98.19 E-value=0.00063 Score=61.74 Aligned_cols=180 Identities=13% Similarity=0.087 Sum_probs=104.4
Q ss_pred CCceEEEeeC--CCeEEEEEcCCEEEEEEcCCCeEEE---EeecCCccccceEEcCC--CCEEEEeCCCCeEEEc--CCC
Q 018705 53 HPEDVSVVVS--KGALYTATRDGWVKYFILHNETLVN---WKHIDSQSLLGLTTTKD--GGVILCDNEKGLLKVT--EEG 123 (351)
Q Consensus 53 ~pe~i~~d~~--~g~lyv~~~~g~I~~~d~~~g~~~~---~~~~~~~p~~gl~~d~~--G~L~v~d~~~gl~~~~--~~g 123 (351)
...++++.+. +..++++..||.|..||..+++... +........ .+++.++ |+++++....+.+++. .++
T Consensus 57 ~v~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~-~~~~~~~~~~~~l~~~~~d~~i~v~d~~~~ 135 (379)
T 3jrp_A 57 PVWRVDWAHPKFGTILASCSYDGKVLIWKEENGRWSQIAVHAVHSASVN-SVQWAPHEYGPLLLVASSDGKVSVVEFKEN 135 (379)
T ss_dssp CEEEEEECCGGGCSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEE-EEEECCGGGCSEEEEEETTSEEEEEECCTT
T ss_pred cEEEEEeCCCCCCCEEEEeccCCEEEEEEcCCCceeEeeeecCCCcceE-EEEeCCCCCCCEEEEecCCCcEEEEecCCC
Confidence 3457888755 6788899999999999987776322 222334456 8999988 8766655555555554 222
Q ss_pred ----eEEecCCCCCcccEEEcc-------------CCcEEEEeCCCccCCcccccccccccCCceEEEEeCCCCe--EE-
Q 018705 124 ----VEAIVPDASFTNDVIAAS-------------DGTLYFTVASTKYTPTDFYKDMAEGKPYGQLRKYDPKLKE--TT- 183 (351)
Q Consensus 124 ----~~~l~~~~~~~n~l~~d~-------------dG~ly~t~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~~~--~~- 183 (351)
...+......+..+++++ ++.+.++.+. +|.|..||..+++ ..
T Consensus 136 ~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-----------------dg~i~i~d~~~~~~~~~~ 198 (379)
T 3jrp_A 136 GTTSPIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGA-----------------DNLVKIWKYNSDAQTYVL 198 (379)
T ss_dssp SCCCEEEEECCTTCEEEEEECCCC----------CTTCEEEEEET-----------------TSCEEEEEEETTTTEEEE
T ss_pred CceeeEEecCCCCceEEEEEcCccccccccccCCCCCCEEEEEeC-----------------CCeEEEEEecCCCcceee
Confidence 222222235678888888 5766665543 4567777754332 11
Q ss_pred --EeecCccccceEEEcCC---CCEEEEEecce--eEEeecCCCC--ceeEEec-cCCCCCCceEECCCCCEEEEEe
Q 018705 184 --VLHEGFYFANGIALSKN---EDFVVVCESWK--RYWLKGDRAG--ILDAFIE-NLPGGPDNINLAPDGSFWIGLI 250 (351)
Q Consensus 184 --~~~~~~~~~ngi~~~~d---g~~lyv~~~~~--~~~i~~~~~~--~~~~~~~-~~~g~pd~i~~d~~G~lwva~~ 250 (351)
.+.........++++|+ ++.++.+..++ ++|-...... ....+.. ...+....++++++|++.++..
T Consensus 199 ~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~ 275 (379)
T 3jrp_A 199 ESTLEGHSDWVRDVAWSPTVLLRSYLASVSQDRTCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSG 275 (379)
T ss_dssp EEEECCCSSCEEEEEECCCCSSSEEEEEEETTSCEEEEEESSTTSCCEEEESSSSCCSSCEEEEEECSSSCCEEEEE
T ss_pred EEEEecccCcEeEEEECCCCCCCCeEEEEeCCCEEEEEeCCCCCccceeeeeccccCCCcEEEEEEcCCCCEEEEec
Confidence 11222345678999999 77666666665 5553221111 1111111 1222234568889997555443
No 250
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=98.17 E-value=5.9e-05 Score=75.87 Aligned_cols=190 Identities=9% Similarity=0.029 Sum_probs=100.7
Q ss_pred CceEEEeeCCCeEEEEEc---------CCEEEEEEcCCCeE---EEEeecCCccccceEEcCCCCEEEEeCCCCeEEEcC
Q 018705 54 PEDVSVVVSKGALYTATR---------DGWVKYFILHNETL---VNWKHIDSQSLLGLTTTKDGGVILCDNEKGLLKVTE 121 (351)
Q Consensus 54 pe~i~~d~~~g~lyv~~~---------~g~I~~~d~~~g~~---~~~~~~~~~p~~gl~~d~~G~L~v~d~~~gl~~~~~ 121 (351)
..+++++|++..+..+.. ++.|+.+|.++++. +.+ ..... .+++++||+.++....+.++..+.
T Consensus 62 ~~~~~~SpDg~~la~~~~~~~~~~~s~~~~i~~~d~~~g~~~~~~~l---~~~~~-~~~~SPDG~~la~~~~~~i~~~~~ 137 (719)
T 1z68_A 62 ASNYGLSPDRQFVYLESDYSKLWRYSYTATYYIYDLSNGEFVRGNEL---PRPIQ-YLCWSPVGSKLAYVYQNNIYLKQR 137 (719)
T ss_dssp CSEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETTTTEECCSSCC---CSSBC-CEEECSSTTCEEEEETTEEEEESS
T ss_pred eeeEEECCCCCeEEEEecCceeEEeecceEEEEEECCCCccccceec---Ccccc-cceECCCCCEEEEEECCeEEEEeC
Confidence 568999987777766544 57899999988876 333 23455 889999996443333445666664
Q ss_pred -CC-eEEecCCC-------------------CCcccEEEccCCc-EEEEeC-CCccC---C-----ccc--ccc---ccc
Q 018705 122 -EG-VEAIVPDA-------------------SFTNDVIAASDGT-LYFTVA-STKYT---P-----TDF--YKD---MAE 165 (351)
Q Consensus 122 -~g-~~~l~~~~-------------------~~~n~l~~d~dG~-ly~t~~-~~~~~---~-----~~~--~~~---~~~ 165 (351)
+| ...+.... ....+++++|||+ |.++.. ..... . ... ... -..
T Consensus 138 ~~g~~~~l~~~~~~~~v~~g~~~~v~~ee~~~~~~~~~wSPDG~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~~yp~~ 217 (719)
T 1z68_A 138 PGDPPFQITFNGRENKIFNGIPDWVYEEEMLATKYALWWSPNGKFLAYAEFNDTDIPVIAYSYYGDEQYPRTINIPYPKA 217 (719)
T ss_dssp TTSCCEECCCCCBTTTEEESSCCHHHHHHTTCSSCCEEECTTSSEEEEEEEECTTSCEEEEEECCSSSSCEEEEEECCBT
T ss_pred CCCCcEEEecCCCcCCeEcccccceeeeecccCcccEEECCCCCEEEEEEECCCCCceEEeeccCCCCCccceeecCCCC
Confidence 55 44443211 1125899999995 444321 11000 0 000 000 000
Q ss_pred cc--CCceEEEEeCCCCeEE---Eee------cCccccceEEEcCCCCEEEEEecc-e---eEEeec----CCCCceeEE
Q 018705 166 GK--PYGQLRKYDPKLKETT---VLH------EGFYFANGIALSKNEDFVVVCESW-K---RYWLKG----DRAGILDAF 226 (351)
Q Consensus 166 ~~--~~g~l~~~d~~~~~~~---~~~------~~~~~~ngi~~~~dg~~lyv~~~~-~---~~~i~~----~~~~~~~~~ 226 (351)
+. ....|+.+|.++++.. .+. ........++++||++.++..... . ++++-+ ...++....
T Consensus 218 g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~SpD~~~~~~~~~~~~~~~~l~~~d~~~~~~~g~~~~~ 297 (719)
T 1z68_A 218 GAKNPVVRIFIIDTTYPAYVGPQEVPVPAMIASSDYYFSWLTWVTDERVCLQWLKRVQNVSVLSICDFREDWQTWDCPKT 297 (719)
T ss_dssp TSCCCEEEEEEEESSCHHHHCCEECCCCHHHHTSCEEEEEEEESSSSEEEEEEEESSTTEEEEEEEEECSSSSSEECCGG
T ss_pred CCCCCeeEEEEEECCCCCccceeEccCCccCCCCcceEEEeEEeCCCeEEEEEeccccCeEEEEEEcccCCCCCCceEEE
Confidence 11 2236888998876531 211 112234678999998644442211 1 455544 333332222
Q ss_pred e----ccCCCCCC-----ceEECCCCC-EEE
Q 018705 227 I----ENLPGGPD-----NINLAPDGS-FWI 247 (351)
Q Consensus 227 ~----~~~~g~pd-----~i~~d~~G~-lwv 247 (351)
. ....+..+ .+.++++|+ +++
T Consensus 298 ~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~ 328 (719)
T 1z68_A 298 QEHIEESRTGWAGGFFVSTPVFSYDAISYYK 328 (719)
T ss_dssp GEEEEECSSSCSSSSSCCCCEECTTSSCEEE
T ss_pred EecccccCCceEccccCCccEECCCCCeEEE
Confidence 2 12223333 678999997 444
No 251
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=98.17 E-value=0.0029 Score=56.13 Aligned_cols=179 Identities=13% Similarity=0.126 Sum_probs=103.6
Q ss_pred CCceEEEeeCCCeEEEEEcCCEEEEEEcCCCe---EEEEeecCCccccceEEcC--CCCEEEEeCCCCeEEEcC--CC--
Q 018705 53 HPEDVSVVVSKGALYTATRDGWVKYFILHNET---LVNWKHIDSQSLLGLTTTK--DGGVILCDNEKGLLKVTE--EG-- 123 (351)
Q Consensus 53 ~pe~i~~d~~~g~lyv~~~~g~I~~~d~~~g~---~~~~~~~~~~p~~gl~~d~--~G~L~v~d~~~gl~~~~~--~g-- 123 (351)
.-.++++++++..|.++..|+.|..|+..++. ...+........ .+++.+ +|+++++....+.++++. ++
T Consensus 11 ~V~~~~~s~~g~~las~s~D~~v~iw~~~~~~~~~~~~l~gH~~~V~-~v~~s~~~~g~~l~s~s~D~~v~iWd~~~~~~ 89 (297)
T 2pm7_B 11 MIHDAVMDYYGKRMATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVW-RVDWAHPKFGTILASCSYDGKVMIWKEENGRW 89 (297)
T ss_dssp CEEEEEECTTSSEEEEEETTSCEEEEEBCSSCBCCCEEECCCSSCEE-EEEECCGGGCSEEEEEETTTEEEEEEBSSSCB
T ss_pred ceEEEEECCCCCEEEEEeCCCEEEEEecCCCCcEEEEEEccccCCeE-EEEecCCCcCCEEEEEcCCCEEEEEEcCCCce
Confidence 34588999877888999999999999975432 233333334456 888864 477777666667777762 33
Q ss_pred --eEEecCCCCCcccEEEccC--CcEEEEeCCCccCCcccccccccccCCceEEEEeCCCCe---EEEeecCccccceEE
Q 018705 124 --VEAIVPDASFTNDVIAASD--GTLYFTVASTKYTPTDFYKDMAEGKPYGQLRKYDPKLKE---TTVLHEGFYFANGIA 196 (351)
Q Consensus 124 --~~~l~~~~~~~n~l~~d~d--G~ly~t~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~~~---~~~~~~~~~~~ngi~ 196 (351)
...+......++++++.|+ |.+.++.+. ++.|..||..++. ...+.......+.++
T Consensus 90 ~~~~~~~~h~~~v~~v~~~p~~~g~~l~s~s~-----------------d~~v~~wd~~~~~~~~~~~~~~h~~~v~~~~ 152 (297)
T 2pm7_B 90 SQIAVHAVHSASVNSVQWAPHEYGPMLLVASS-----------------DGKVSVVEFKENGTTSPIIIDAHAIGVNSAS 152 (297)
T ss_dssp CCCEEECCCSSCEEEEEECCGGGCSEEEEEET-----------------TSEEEEEEBCSSSCBCCEEEECCSSCEEEEE
T ss_pred EEEEEeecCCCceeEEEeCcCCCCcEEEEEEC-----------------CCcEEEEEecCCCceeeeeeecccCccceEe
Confidence 2233323356889999987 766666543 4677777765432 122222233456788
Q ss_pred EcCC-------------CCEEEEEecce--eEEeecCCCCceeEE--eccCCCCCCceEECCCC---CEEEEE
Q 018705 197 LSKN-------------EDFVVVCESWK--RYWLKGDRAGILDAF--IENLPGGPDNINLAPDG---SFWIGL 249 (351)
Q Consensus 197 ~~~d-------------g~~lyv~~~~~--~~~i~~~~~~~~~~~--~~~~~g~pd~i~~d~~G---~lwva~ 249 (351)
++|+ ++.|..+..++ ++|-........... .....+....+++++++ ++.++.
T Consensus 153 ~~p~~~~~~~~~~~~~~~~~l~sgs~D~~v~lwd~~~~~~~~~~~~~l~~H~~~V~~v~~sp~~~~~~~las~ 225 (297)
T 2pm7_B 153 WAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYMASV 225 (297)
T ss_dssp ECCCC------------CCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEE
T ss_pred ecCCcccccccCCCCCCcceEEEEcCCCcEEEEEEcCCCceEEEEEEecCCCCceEEEEECCCCCCceEEEEE
Confidence 8886 35565566555 666321111111111 11222233557888875 444444
No 252
>3q6k_A 43.2 kDa salivary protein; beta propeller, binding protein, serotonin, salivary gland, binding, ligand binging protein; HET: CIT SRO; 2.52A {Lutzomyia longipalpis} PDB: 3q6p_A* 3q6t_A*
Probab=98.17 E-value=0.00026 Score=65.66 Aligned_cols=182 Identities=9% Similarity=0.064 Sum_probs=112.2
Q ss_pred CcCCCceEEEeeCCCeEEEEEc----------------CCEEEEEEcCCC--eE-EEEeec------CCccccceEEc-C
Q 018705 50 CVNHPEDVSVVVSKGALYTATR----------------DGWVKYFILHNE--TL-VNWKHI------DSQSLLGLTTT-K 103 (351)
Q Consensus 50 ~~~~pe~i~~d~~~g~lyv~~~----------------~g~I~~~d~~~g--~~-~~~~~~------~~~p~~gl~~d-~ 103 (351)
.+...-++.+| ..++|||-.. .-+|+.+|.+++ ++ +++..+ ..... .+++| .
T Consensus 85 ~lvsV~~v~iD-~~~rLWVLDtG~~~~~~~~~~~~~~~~pkLv~~DL~t~~~~li~~y~~p~~~~~~~S~l~-di~VD~~ 162 (381)
T 3q6k_A 85 ELTSIYQPVID-DCRRLWVVDIGSVEYRSRGAKDYPSHRPAIVAYDLKQPNYPEVVRYYFPTRLVEKPTYFG-GFAVDVA 162 (381)
T ss_dssp SSSCEEEEEEC-TTCEEEEEECSSCSSCSTTGGGSCCCCCEEEEEESSSTTCCEEEEEECCGGGCCCGGGEE-EEEEEES
T ss_pred ceEEeeEEEEc-CCCcEEEEeCCCcCcCCCccccCCCCCceEEEEECCCCCceeEEEEECCHHhcccCCccc-eEEEecc
Confidence 36778899999 6899998321 126999999888 65 344322 12345 78888 2
Q ss_pred -------CCCEEEEeCC-CCeEEEc-CCC--eEEec-----CCC-------------CCcccEEEccC----C-cEEEEe
Q 018705 104 -------DGGVILCDNE-KGLLKVT-EEG--VEAIV-----PDA-------------SFTNDVIAASD----G-TLYFTV 149 (351)
Q Consensus 104 -------~G~L~v~d~~-~gl~~~~-~~g--~~~l~-----~~~-------------~~~n~l~~d~d----G-~ly~t~ 149 (351)
++.+||+|.. .+|+.++ .+| .+++. +.. ..+++|+++++ + .+||+.
T Consensus 163 ~~~~~c~~~~aYItD~~~~gLIVydl~~~~swRv~~~~~~pd~~~~~~i~G~~~~~~~Gi~gIaLsp~~~~~~~~LYf~p 242 (381)
T 3q6k_A 163 NPKGDCSETFVYITNFLRGALFIYDHKKQDSWNVTHPTFKAERPTKFDYGGKEYEFKAGIFGITLGDRDSEGNRPAYYLA 242 (381)
T ss_dssp CTTTTSCSEEEEEEETTTTEEEEEETTTTEEEEEECGGGSCCSCEEEEETTEEEEECCCEEEEEECCCCTTSCCEEEEEE
T ss_pred cCCCCCCccEEEEEcCCCCcEEEEECCCCcEEEEccCCCccccCcceEECCEEeEeccCceEEEecCCcCCCCeEEEEEE
Confidence 3568999965 4788888 455 44432 100 36788899886 4 689987
Q ss_pred CCCccCCcccccccccccCCceEEEEe------CC-CCeEEEeecCccccc--eEEEc-CCCCEEEEEecce-e--EEee
Q 018705 150 ASTKYTPTDFYKDMAEGKPYGQLRKYD------PK-LKETTVLHEGFYFAN--GIALS-KNEDFVVVCESWK-R--YWLK 216 (351)
Q Consensus 150 ~~~~~~~~~~~~~~~~~~~~g~l~~~d------~~-~~~~~~~~~~~~~~n--gi~~~-~dg~~lyv~~~~~-~--~~i~ 216 (351)
.++. .+|++. +. ...++.+.+...... +++++ .+| .||+++... . .|-.
T Consensus 243 lss~-----------------~ly~V~T~~L~~~~~~~~v~~~G~kg~~s~~~~~~~D~~~G-~ly~~~~~~~aI~~w~~ 304 (381)
T 3q6k_A 243 GSAI-----------------KVYSVNTKELKQKGGKLNPELLGNRGKYNDAIALAYDPKTK-VIFFAEANTKQVSCWNT 304 (381)
T ss_dssp SSCS-----------------EEEEEEHHHHSSTTCCCCCEEEEECCTTCCEEEEEECTTTC-EEEEEESSSSEEEEEET
T ss_pred CCCC-----------------cEEEEEHHHhhCcchhhceEEeeecCCCCCcceEEEeCCCC-eEEEEeccCCeEEEEeC
Confidence 6521 344442 11 234444444332344 45665 566 599999876 2 3322
Q ss_pred cC-C--CCceeEEec-cCCCCCCceEECCCCCEEEEEec
Q 018705 217 GD-R--AGILDAFIE-NLPGGPDNINLAPDGSFWIGLIK 251 (351)
Q Consensus 217 ~~-~--~~~~~~~~~-~~~g~pd~i~~d~~G~lwva~~~ 251 (351)
.. . .++.+++.. ..-.+|+++.+|.+|.||+....
T Consensus 305 ~~~~~~~~n~~~l~~d~~l~~pd~~~i~~~g~Lwv~sn~ 343 (381)
T 3q6k_A 305 QKMPLRMKNTDVVYTSSRFVFGTDISVDSKGGLWFMSNG 343 (381)
T ss_dssp TSCSBCGGGEEEEEECTTCCSEEEEEECTTSCEEEEECS
T ss_pred CCCccccCceEEEEECCCccccCeEEECCCCeEEEEECc
Confidence 11 1 133444433 32347999999999999998754
No 253
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=98.17 E-value=0.0036 Score=58.71 Aligned_cols=134 Identities=14% Similarity=0.106 Sum_probs=72.9
Q ss_pred cCCceEEEEeCCCCeEEEeecC-ccccceEEEcCCCCEEEEEecce--eEEeecCCCCce-eEEeccCCCCCCceEECCC
Q 018705 167 KPYGQLRKYDPKLKETTVLHEG-FYFANGIALSKNEDFVVVCESWK--RYWLKGDRAGIL-DAFIENLPGGPDNINLAPD 242 (351)
Q Consensus 167 ~~~g~l~~~d~~~~~~~~~~~~-~~~~ngi~~~~dg~~lyv~~~~~--~~~i~~~~~~~~-~~~~~~~~g~pd~i~~d~~ 242 (351)
..+|.|..||..+++....... ......+++ +++.++.+..++ ++| +...++. ..+. ........+.. +
T Consensus 256 ~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~d~~i~i~--d~~~~~~~~~~~-~~~~~v~~~~~--~ 328 (445)
T 2ovr_B 256 AYDFMVKVWDPETETCLHTLQGHTNRVYSLQF--DGIHVVSGSLDTSIRVW--DVETGNCIHTLT-GHQSLTSGMEL--K 328 (445)
T ss_dssp ETTSCEEEEEGGGTEEEEEECCCSSCEEEEEE--CSSEEEEEETTSCEEEE--ETTTCCEEEEEC-CCCSCEEEEEE--E
T ss_pred cCCCEEEEEECCCCcEeEEecCCCCceEEEEE--CCCEEEEEeCCCeEEEE--ECCCCCEEEEEc-CCcccEEEEEE--e
Confidence 3457788888776654433322 223445555 677677776666 444 2222221 2221 11112223334 4
Q ss_pred CCEEEEEecCCchhhhhhhcChhHHHHHHhccchhhcccCCCCCCceEEEEEECCCCeEEEEEECCCCCcccceeEEEEE
Q 018705 243 GSFWIGLIKMNQTGVRAIQKCREKWELLDAYPGLISLLLPMGSDAGARVVKVDGNDGKIIRDFNDPDATYISFVTSAAEF 322 (351)
Q Consensus 243 G~lwva~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~g~~~~~~~~~~g~~~~~~~~~~~~ 322 (351)
|++.++... .+.|..+|..+++.+..+..+.. ....++++..+
T Consensus 329 ~~~l~~~~~------------------------------------dg~i~vwd~~~~~~~~~~~~~~~-~~~~v~~~~~~ 371 (445)
T 2ovr_B 329 DNILVSGNA------------------------------------DSTVKIWDIKTGQCLQTLQGPNK-HQSAVTCLQFN 371 (445)
T ss_dssp TTEEEEEET------------------------------------TSCEEEEETTTCCEEEEECSTTS-CSSCEEEEEEC
T ss_pred CCEEEEEeC------------------------------------CCeEEEEECCCCcEEEEEccCCC-CCCCEEEEEEC
Confidence 555554332 23477778767888888865332 23456777666
Q ss_pred CCEEEEEecCCCeEEEEeCCCCC
Q 018705 323 DGNLYLASLQSNFIGILPLDGPE 345 (351)
Q Consensus 323 ~g~L~ig~~~~~~i~~~~~~~~~ 345 (351)
+..|..|+. .+.|..+++.+.+
T Consensus 372 ~~~l~s~~~-dg~v~iwd~~~~~ 393 (445)
T 2ovr_B 372 KNFVITSSD-DGTVKLWDLKTGE 393 (445)
T ss_dssp SSEEEEEET-TSEEEEEETTTCC
T ss_pred CCEEEEEeC-CCeEEEEECCCCc
Confidence 666666664 6778888877653
No 254
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=98.15 E-value=0.003 Score=59.26 Aligned_cols=217 Identities=11% Similarity=0.073 Sum_probs=122.9
Q ss_pred EeeCCCeEEEEEcCCEEEEEEcCCCeEEE-EeecCCccccceEEcCCCCEEEEeCCCCeEEEc--CCC--eEEecCCCCC
Q 018705 59 VVVSKGALYTATRDGWVKYFILHNETLVN-WKHIDSQSLLGLTTTKDGGVILCDNEKGLLKVT--EEG--VEAIVPDASF 133 (351)
Q Consensus 59 ~d~~~g~lyv~~~~g~I~~~d~~~g~~~~-~~~~~~~p~~gl~~d~~G~L~v~d~~~gl~~~~--~~g--~~~l~~~~~~ 133 (351)
+.++++.++++..+|.|..||..+++... +........ .++++ ++++++....+.+++. .++ ...+......
T Consensus 125 ~~~~g~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~-~~~~~--~~~l~s~~~dg~i~vwd~~~~~~~~~~~~h~~~ 201 (445)
T 2ovr_B 125 LQFCGNRIVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVW-SSQMR--DNIIISGSTDRTLKVWNAETGECIHTLYGHTST 201 (445)
T ss_dssp EEEETTEEEEEETTSCEEEEETTTCCEEEECCCCSSCEE-EEEEE--TTEEEEEETTSCEEEEETTTTEEEEEECCCSSC
T ss_pred EEEcCCEEEEEECCCcEEEEECCCCcEEEEEcCCCCCEE-EEEec--CCEEEEEeCCCeEEEEECCcCcEEEEECCCCCc
Confidence 33347889999999999999987776543 322333344 77776 4444444444555555 355 4444433345
Q ss_pred cccEEEccCCcEEEEeCCCccCCcccccccccccCCceEEEEeCCCCeEEEee-cCccccceEEEcCCCCEEEEEecce-
Q 018705 134 TNDVIAASDGTLYFTVASTKYTPTDFYKDMAEGKPYGQLRKYDPKLKETTVLH-EGFYFANGIALSKNEDFVVVCESWK- 211 (351)
Q Consensus 134 ~n~l~~d~dG~ly~t~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~~~~~~~~-~~~~~~ngi~~~~dg~~lyv~~~~~- 211 (351)
+.++.++ +...++.+. +|.|..||..+++..... ........+++ +++.++.+..++
T Consensus 202 v~~~~~~--~~~l~s~s~-----------------dg~i~~wd~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~ 260 (445)
T 2ovr_B 202 VRCMHLH--EKRVVSGSR-----------------DATLRVWDIETGQCLHVLMGHVAAVRCVQY--DGRRVVSGAYDFM 260 (445)
T ss_dssp EEEEEEE--TTEEEEEET-----------------TSEEEEEESSSCCEEEEEECCSSCEEEEEE--CSSCEEEEETTSC
T ss_pred EEEEEec--CCEEEEEeC-----------------CCEEEEEECCCCcEEEEEcCCcccEEEEEE--CCCEEEEEcCCCE
Confidence 6666664 334444332 568999998776654332 22334456666 566677776666
Q ss_pred -eEEeecCCCCce-eEEeccCCCCCCceEECCCCCEEEEEecCCchhhhhhhcChhHHHHHHhccchhhcccCCCCCCce
Q 018705 212 -RYWLKGDRAGIL-DAFIENLPGGPDNINLAPDGSFWIGLIKMNQTGVRAIQKCREKWELLDAYPGLISLLLPMGSDAGA 289 (351)
Q Consensus 212 -~~~i~~~~~~~~-~~~~~~~~g~pd~i~~d~~G~lwva~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 289 (351)
++|-. ..++. ..+. ...+....+.+ +|+..++... .+
T Consensus 261 i~iwd~--~~~~~~~~~~-~~~~~v~~~~~--~~~~l~~~~~------------------------------------d~ 299 (445)
T 2ovr_B 261 VKVWDP--ETETCLHTLQ-GHTNRVYSLQF--DGIHVVSGSL------------------------------------DT 299 (445)
T ss_dssp EEEEEG--GGTEEEEEEC-CCSSCEEEEEE--CSSEEEEEET------------------------------------TS
T ss_pred EEEEEC--CCCcEeEEec-CCCCceEEEEE--CCCEEEEEeC------------------------------------CC
Confidence 44421 11221 1111 11122233455 5654444332 13
Q ss_pred EEEEEECCCCeEEEEEECCCCCcccceeEEEEECCEEEEEecCCCeEEEEeCCCCC
Q 018705 290 RVVKVDGNDGKIIRDFNDPDATYISFVTSAAEFDGNLYLASLQSNFIGILPLDGPE 345 (351)
Q Consensus 290 ~v~~~~~~~g~~~~~~~~~~g~~~~~~~~~~~~~g~L~ig~~~~~~i~~~~~~~~~ 345 (351)
.+..+|..+++.+..+..+.. .+.++...++.|..|+. .+.|..+++++..
T Consensus 300 ~i~i~d~~~~~~~~~~~~~~~----~v~~~~~~~~~l~~~~~-dg~i~vwd~~~~~ 350 (445)
T 2ovr_B 300 SIRVWDVETGNCIHTLTGHQS----LTSGMELKDNILVSGNA-DSTVKIWDIKTGQ 350 (445)
T ss_dssp CEEEEETTTCCEEEEECCCCS----CEEEEEEETTEEEEEET-TSCEEEEETTTCC
T ss_pred eEEEEECCCCCEEEEEcCCcc----cEEEEEEeCCEEEEEeC-CCeEEEEECCCCc
Confidence 477778767787777754432 35566667777777765 6678888876544
No 255
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=98.12 E-value=2.1e-05 Score=66.89 Aligned_cols=107 Identities=13% Similarity=0.014 Sum_probs=74.9
Q ss_pred ccCceEecCCCcCCCceEEEeeCCCeEEEEEcCCEEEEEEcCCCeEE-------EEeecCCccccceEEcCCCCEEEEeC
Q 018705 40 MKGLTKLGEGCVNHPEDVSVVVSKGALYTATRDGWVKYFILHNETLV-------NWKHIDSQSLLGLTTTKDGGVILCDN 112 (351)
Q Consensus 40 l~~~~~i~~~~~~~pe~i~~d~~~g~lyv~~~~g~I~~~d~~~g~~~-------~~~~~~~~p~~gl~~d~~G~L~v~d~ 112 (351)
+..+.++..+....-.+++++| +|.||.. .+|.++++++.+++.+ .+...+..-...+.+|++|.||++..
T Consensus 29 ~~~a~~iG~~gw~~~~~laf~P-~G~LYaV-~~G~Ly~~~~~t~~~~~W~~s~t~IG~~Gw~~F~a~~fD~~G~LYav~d 106 (236)
T 1tl2_A 29 LARATLIGKGGWSNFKFLFLSP-GGELYGV-LNDKIYKGTPPTHDNDNWMGRAKKIGNGGWNQFQFLFFDPNGYLYAVSK 106 (236)
T ss_dssp HHHSEEEESSSCTTCSEEEECT-TSCEEEE-ETTEEEEESCCCSTTCCHHHHCEEEECSCGGGCSEEEECTTSCEEEEET
T ss_pred hhhccccCccccccceeEEECC-CccEEEE-eCCeEEEECCCCCCcccccccccEecccccccceEEEECCCCCEEEeCC
Confidence 3567888886678889999997 8889988 8899999998663322 22211111122789999999999954
Q ss_pred CCCeEEEcC--CC-e------EEecCC-CCCcccEEEccCCcEEEEe
Q 018705 113 EKGLLKVTE--EG-V------EAIVPD-ASFTNDVIAASDGTLYFTV 149 (351)
Q Consensus 113 ~~gl~~~~~--~g-~------~~l~~~-~~~~n~l~~d~dG~ly~t~ 149 (351)
..++|+++ ++ - ..+... -.....|.++|+|.||..+
T Consensus 107 -G~iyr~~pP~~~~~~Wl~~a~~vg~~gw~~~~~lff~p~G~Lyav~ 152 (236)
T 1tl2_A 107 -DKLYKASPPQSDTDNWIARATEVGSGGWSGFKFLFFHPNGYLYAVH 152 (236)
T ss_dssp -TEEEEESCCCSTTCCHHHHSEEEECSSGGGEEEEEECTTSCEEEEE
T ss_pred -CEEEEeCCCcCCCCceeccccEeccCCCCceEEEEECCCceEEEEe
Confidence 67889984 33 2 222221 1455789999999999877
No 256
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=98.11 E-value=0.0006 Score=61.89 Aligned_cols=142 Identities=9% Similarity=0.043 Sum_probs=93.3
Q ss_pred CceEEEee--CCCeEEEEEcCCEEEEEEcCCCeEEEEe-ec-CCccccceEEcCCCCEEEEeCCCCeEEEc--CCC--e-
Q 018705 54 PEDVSVVV--SKGALYTATRDGWVKYFILHNETLVNWK-HI-DSQSLLGLTTTKDGGVILCDNEKGLLKVT--EEG--V- 124 (351)
Q Consensus 54 pe~i~~d~--~~g~lyv~~~~g~I~~~d~~~g~~~~~~-~~-~~~p~~gl~~d~~G~L~v~d~~~gl~~~~--~~g--~- 124 (351)
..+++++| .+..+.++..||.|..||..+++..... .. ..... .++++++|.++++....+.+++. .++ .
T Consensus 128 v~~~~~~~~~~~~~l~s~s~dg~i~~wd~~~~~~~~~~~~~~~~~i~-~~~~~pdg~~lasg~~dg~i~iwd~~~~~~~~ 206 (343)
T 3lrv_A 128 IIYMYGHNEVNTEYFIWADNRGTIGFQSYEDDSQYIVHSAKSDVEYS-SGVLHKDSLLLALYSPDGILDVYNLSSPDQAS 206 (343)
T ss_dssp EEEEECCC---CCEEEEEETTCCEEEEESSSSCEEEEECCCSSCCCC-EEEECTTSCEEEEECTTSCEEEEESSCTTSCC
T ss_pred EEEEEcCCCCCCCEEEEEeCCCcEEEEECCCCcEEEEEecCCCCceE-EEEECCCCCEEEEEcCCCEEEEEECCCCCCCc
Confidence 46788887 6677888999999999999887764332 22 22355 89999999988875566666665 355 3
Q ss_pred EEecC-CCCCcccEEEccCCcEEEEeCCCccCCcccccccccccCCceEEEEeCCCCeEEEeecCc----ccc--ceEEE
Q 018705 125 EAIVP-DASFTNDVIAASDGTLYFTVASTKYTPTDFYKDMAEGKPYGQLRKYDPKLKETTVLHEGF----YFA--NGIAL 197 (351)
Q Consensus 125 ~~l~~-~~~~~n~l~~d~dG~ly~t~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~~~~~~~~~~~----~~~--ngi~~ 197 (351)
..+.. ....+++++++|+|...++.+. +.|..||..+++.......+ ... ..+++
T Consensus 207 ~~~~~~h~~~v~~l~fs~~g~~l~s~~~------------------~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~ 268 (343)
T 3lrv_A 207 SRFPVDEEAKIKEVKFADNGYWMVVECD------------------QTVVCFDLRKDVGTLAYPTYTIPEFKTGTVTYDI 268 (343)
T ss_dssp EECCCCTTSCEEEEEECTTSSEEEEEES------------------SBEEEEETTSSTTCBSSCCCBC-----CCEEEEE
T ss_pred cEEeccCCCCEEEEEEeCCCCEEEEEeC------------------CeEEEEEcCCCCcceeecccccccccccceEEEE
Confidence 55554 3467899999999987666543 36888887654321111110 111 34999
Q ss_pred cCCCCEEEEEec-ce--eEE
Q 018705 198 SKNEDFVVVCES-WK--RYW 214 (351)
Q Consensus 198 ~~dg~~lyv~~~-~~--~~~ 214 (351)
+|+|++|..+.. ++ ++|
T Consensus 269 ~~~g~~l~~~s~~d~~i~v~ 288 (343)
T 3lrv_A 269 DDSGKNMIAYSNESNSLTIY 288 (343)
T ss_dssp CTTSSEEEEEETTTTEEEEE
T ss_pred CCCCCEEEEecCCCCcEEEE
Confidence 999997776554 33 555
No 257
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=98.10 E-value=0.00024 Score=73.74 Aligned_cols=179 Identities=13% Similarity=0.067 Sum_probs=109.5
Q ss_pred CCCceEEEeeCCCeEEEEEcCCEEEEEEcCCCeEEEEeecCCccccceEEcCCCCEEEEeCCCCeEEEc--CCC--eEEe
Q 018705 52 NHPEDVSVVVSKGALYTATRDGWVKYFILHNETLVNWKHIDSQSLLGLTTTKDGGVILCDNEKGLLKVT--EEG--VEAI 127 (351)
Q Consensus 52 ~~pe~i~~d~~~g~lyv~~~~g~I~~~d~~~g~~~~~~~~~~~p~~gl~~d~~G~L~v~d~~~gl~~~~--~~g--~~~l 127 (351)
....+++++|++..|.++..||.|..|+..+++............ .++|.+ |++.++-...+.++++ .++ ...+
T Consensus 18 ~~V~~lafspdg~~lAsgs~Dg~I~lw~~~~~~~~~~~~~~~~V~-~l~fsp-g~~L~S~s~D~~v~lWd~~~~~~~~~~ 95 (902)
T 2oaj_A 18 SKPIAAAFDFTQNLLAIATVTGEVHIYGQQQVEVVIKLEDRSAIK-EMRFVK-GIYLVVINAKDTVYVLSLYSQKVLTTV 95 (902)
T ss_dssp SCEEEEEEETTTTEEEEEETTSEEEEECSTTCEEEEECSSCCCEE-EEEEET-TTEEEEEETTCEEEEEETTTCSEEEEE
T ss_pred CCcEEEEECCCCCEEEEEeCCCEEEEEeCCCcEEEEEcCCCCCEE-EEEEcC-CCEEEEEECcCeEEEEECCCCcEEEEE
Confidence 456799999888889999999999999986655433222223455 899999 8744444445666666 245 4444
Q ss_pred cCCCCCcccEEEccCCcEEEEeCCCccCCcccccccccccCCceEEEEeCCCCeEEEee------------cCccccceE
Q 018705 128 VPDASFTNDVIAASDGTLYFTVASTKYTPTDFYKDMAEGKPYGQLRKYDPKLKETTVLH------------EGFYFANGI 195 (351)
Q Consensus 128 ~~~~~~~n~l~~d~dG~ly~t~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~~~~~~~~------------~~~~~~ngi 195 (351)
... ..+..++++|+|...++.+. +|.|..||..+++...+. ........|
T Consensus 96 ~~~-~~V~~v~~sp~g~~l~sgs~-----------------dg~V~lwd~~~~~~~~~~i~~~~~~~~~~~~h~~~V~sl 157 (902)
T 2oaj_A 96 FVP-GKITSIDTDASLDWMLIGLQ-----------------NGSMIVYDIDRDQLSSFKLDNLQKSSFFPAARLSPIVSI 157 (902)
T ss_dssp ECS-SCEEEEECCTTCSEEEEEET-----------------TSCEEEEETTTTEEEEEEECCHHHHHTCSSSCCCCCCEE
T ss_pred cCC-CCEEEEEECCCCCEEEEEcC-----------------CCcEEEEECCCCccccceeccccccccccccCCCCeEEE
Confidence 322 56888999999976555433 467999998877653211 112346789
Q ss_pred EEcCCC-CEEEEEecceeEEeecCCCCce-eEEeccC-----------------CCCCCceEECCCCCEEEEEec
Q 018705 196 ALSKNE-DFVVVCESWKRYWLKGDRAGIL-DAFIENL-----------------PGGPDNINLAPDGSFWIGLIK 251 (351)
Q Consensus 196 ~~~~dg-~~lyv~~~~~~~~i~~~~~~~~-~~~~~~~-----------------~g~pd~i~~d~~G~lwva~~~ 251 (351)
+++|++ ..+.++..++.+ +-+...++. ..+.... .+....+++.++|++.++...
T Consensus 158 ~~sp~~~~~l~~g~~dg~v-lWd~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~h~~~V~~v~fspdg~~lasgs~ 231 (902)
T 2oaj_A 158 QWNPRDIGTVLISYEYVTL-TYSLVENEIKQSFIYELPPFAPGGDFSEKTNEKRTPKVIQSLYHPNSLHIITIHE 231 (902)
T ss_dssp EEETTEEEEEEEECSSCEE-EEETTTTEEEEEECCCBCTTCCCSTTCCCTTSCBCCCEEEEEECTTSSEEEEEET
T ss_pred EEccCCCCEEEEEeCCCcE-EEECCCCceEEEEecccCCcCCCcccccccccccCCCeEEEEEcCCCCEEEEEEC
Confidence 999964 455555555533 333222221 2221110 012345678899987776543
No 258
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=98.10 E-value=0.00072 Score=60.86 Aligned_cols=213 Identities=10% Similarity=0.159 Sum_probs=115.7
Q ss_pred CCCeEEEEEc--CCEEEEEEcCCCeEEEEeecCCccccceEEcCCCCEEEEeCC--------------CCeEEEcCCC--
Q 018705 62 SKGALYTATR--DGWVKYFILHNETLVNWKHIDSQSLLGLTTTKDGGVILCDNE--------------KGLLKVTEEG-- 123 (351)
Q Consensus 62 ~~g~lyv~~~--~g~I~~~d~~~g~~~~~~~~~~~p~~gl~~d~~G~L~v~d~~--------------~gl~~~~~~g-- 123 (351)
+++.+|.... +++|++++.+....+.+... .+. -|..+ .+.||.+... ..|++++.+|
T Consensus 24 ~g~~iy~~n~~d~~~ly~~~~dg~~~~~l~~~--~~~-~i~~~-g~~Iyy~~~~~~~~~~~~~~~~n~~~Iy~i~~dg~~ 99 (302)
T 3s25_A 24 SDGEVFFSNTNDNGRLYAMNIDGSNIHKLSND--TAM-YINAD-KNYVYYVRNNNQKITSQTFFSYDRNSLCRIKRNGHG 99 (302)
T ss_dssp ETTEEEEEEGGGTTEEEEEETTSCSCEEEEEE--EEE-EEEEC-SSEEEEEEECC------CCSSCCSEEEEEEETTSCC
T ss_pred eCCEEEEEeCCCCceEEEEcCCCCCCEEccCC--cee-eEEEc-CCEEEEEECCCCcccccceeccCCCeEEEEeCCCCc
Confidence 4788888753 67899999855455544332 223 44433 2346555432 3578888766
Q ss_pred eEEecCCCCCcccEEEccCC-cEEEEeCCCccCCcccccccccccCCceEEEEeCCCCeEEEeecCccccceEEEcCCCC
Q 018705 124 VEAIVPDASFTNDVIAASDG-TLYFTVASTKYTPTDFYKDMAEGKPYGQLRKYDPKLKETTVLHEGFYFANGIALSKNED 202 (351)
Q Consensus 124 ~~~l~~~~~~~n~l~~d~dG-~ly~t~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~~~~~~~~~~~~~~ngi~~~~dg~ 202 (351)
.+.+.... +.+++++| .||+++... .....|++.+.++.+.+.+..... .+++++++
T Consensus 100 ~~~l~~~~----~~~~s~~g~~Iy~~~~~~--------------~~~~~Iy~~~~dGs~~~~lt~~~~----~~~~~~g~ 157 (302)
T 3s25_A 100 STVLDPDP----CIYASLIGNYIYYLHYDT--------------QTATSLYRIRIDGEEKKKIKNHYL----FTCNTSDR 157 (302)
T ss_dssp CEEEECSC----EEEEEEETTEEEEEEESS--------------SSCEEEEEEETTSCCCEEEESSCC----CCSEEETT
T ss_pred ceEeecCC----ccEEEEeCCEEEEEeecC--------------CCCceEEEEECCCCCeEEEeCCCc----eEeeEECC
Confidence 55554432 22455555 799987210 013479999988666666655432 45788999
Q ss_pred EEEEEecce-eEEeecCCCCceeEEeccCCCCCCceEECCCC-CEEEEEecCCchhhhhhhcChhHHHHHHhccchhhcc
Q 018705 203 FVVVCESWK-RYWLKGDRAGILDAFIENLPGGPDNINLAPDG-SFWIGLIKMNQTGVRAIQKCREKWELLDAYPGLISLL 280 (351)
Q Consensus 203 ~lyv~~~~~-~~~i~~~~~~~~~~~~~~~~g~pd~i~~d~~G-~lwva~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 280 (351)
.||+++.+. .+.......+..+.+..+ +....++++| .||.+....
T Consensus 158 ~iy~t~~g~~~Iy~~~l~g~~~~~l~~~----~~~~~~~P~g~~iy~t~~~~---------------------------- 205 (302)
T 3s25_A 158 YFYYNNPKNGQLYRYDTASQSEALFYDC----NCYKPVVLDDTNVYYMDVNR---------------------------- 205 (302)
T ss_dssp EEEEECTTTCCEEEEETTTTEEEEEECS----CEEEEEEEETTEEEEEEGGG----------------------------
T ss_pred EEEEEeCCCceEEEEECCCCCEEEEeCC----CccceeeecCCEEEEEEcCC----------------------------
Confidence 999998744 333322222233333321 2233444444 444443210
Q ss_pred cCCCCCCceEEEEEECCCCeEEEEEECCCCCcccceeEEEEECCEEEEEe-cCCCeEEEEeCCCCCC
Q 018705 281 LPMGSDAGARVVKVDGNDGKIIRDFNDPDATYISFVTSAAEFDGNLYLAS-LQSNFIGILPLDGPEP 346 (351)
Q Consensus 281 ~~~~~~~~~~v~~~~~~~g~~~~~~~~~~g~~~~~~~~~~~~~g~L~ig~-~~~~~i~~~~~~~~~~ 346 (351)
...|.+.+. +|.....+.+ .. +..+...+++||..+ ...+.|.++++.+...
T Consensus 206 -------~~~I~~~~l-dG~~~~~Lt~--~~----~~~~~~~g~~Iy~~~~~~~~~i~~~~~DG~~r 258 (302)
T 3s25_A 206 -------DNAIVHVNI-NNPNPVVLTE--AN----IEHYNVYGSLIFYQRGGDNPALCVVKNDGTGF 258 (302)
T ss_dssp -------TTEEEEECS-SSCCCEECSC--SC----EEEEEEETTEEEEEECSSSCEEEEEETTSCCC
T ss_pred -------CcEEEEEEC-CCCCeEEEeC--CC----cceEEECCCEEEEEECCCCcEEEEEECCCCcc
Confidence 024677777 6654444432 11 123445677777753 2346777777777653
No 259
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=98.10 E-value=0.00038 Score=70.73 Aligned_cols=183 Identities=14% Similarity=0.127 Sum_probs=109.1
Q ss_pred CCcCCCceEEEeeCCCeEEEEEcCCEEEEEEcCCCeEE---EEeecCCccccceEEcCC--CCEEEEeCCCCeEEEcC--
Q 018705 49 GCVNHPEDVSVVVSKGALYTATRDGWVKYFILHNETLV---NWKHIDSQSLLGLTTTKD--GGVILCDNEKGLLKVTE-- 121 (351)
Q Consensus 49 ~~~~~pe~i~~d~~~g~lyv~~~~g~I~~~d~~~g~~~---~~~~~~~~p~~gl~~d~~--G~L~v~d~~~gl~~~~~-- 121 (351)
+.-..-.++++++++..+.++..+|.|..|+..++..+ .+........ .+++.++ |+++++....|.+++..
T Consensus 7 gH~~~V~~l~~s~dg~~latg~~dg~I~vwd~~~~~~~~~~~l~~h~~~V~-~l~~s~~~~~~~l~s~s~Dg~I~vwd~~ 85 (753)
T 3jro_A 7 AHNELIHDAVLDYYGKRLATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVW-RVDWAHPKFGTILASCSYDGKVLIWKEE 85 (753)
T ss_dssp -CCCCEEEECCCSSSCCEEEEETTTEEEEEEEETTEEEEEEEECCCSSCEE-EEEECCTTSCSEEEEEETTSCEEEEEEE
T ss_pred cCcceeEEEEECCCCCeEEEEECCCcEEEEecCCCCCccceeccCCcCceE-EEEecCCCCCCEEEEEeCCCeEEEEECC
Confidence 33334567889877788899999999999987544332 2222334455 8899876 87766655566666652
Q ss_pred CC-eEE---ecCCCCCcccEEEccC--CcEEEEeCCCccCCcccccccccccCCceEEEEeCCCCe---EEEeecCcccc
Q 018705 122 EG-VEA---IVPDASFTNDVIAASD--GTLYFTVASTKYTPTDFYKDMAEGKPYGQLRKYDPKLKE---TTVLHEGFYFA 192 (351)
Q Consensus 122 ~g-~~~---l~~~~~~~n~l~~d~d--G~ly~t~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~~~---~~~~~~~~~~~ 192 (351)
++ ... +......+.+++++|+ |.++++.+. +|.|..||..++. ...+.......
T Consensus 86 ~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~l~sgs~-----------------dg~I~vwdl~~~~~~~~~~~~~~~~~v 148 (753)
T 3jro_A 86 NGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASS-----------------DGKVSVVEFKENGTTSPIIIDAHAIGV 148 (753)
T ss_dssp TTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEET-----------------TSEEEEEECCSSSCCCCEEEECCSSCE
T ss_pred CCcccccccccCCCCCeEEEEECCCCCCCEEEEEeC-----------------CCcEEEEEeecCCCcceeEeecCCCce
Confidence 44 222 2222367889999998 877766544 4678888876552 22222333456
Q ss_pred ceEEEcC-------------CCCEEEEEecce--eEE-eecCCCCceeEE--eccCCCCCCceEECCC---CCEEEEEe
Q 018705 193 NGIALSK-------------NEDFVVVCESWK--RYW-LKGDRAGILDAF--IENLPGGPDNINLAPD---GSFWIGLI 250 (351)
Q Consensus 193 ngi~~~~-------------dg~~lyv~~~~~--~~~-i~~~~~~~~~~~--~~~~~g~pd~i~~d~~---G~lwva~~ 250 (351)
..++++| +++.++.+..++ ++| +.... ...... .....+....++++++ |++.++..
T Consensus 149 ~~l~~~p~~~~~~~~~~~~~d~~~l~sgs~dg~I~iwd~~~~~-~~~~~~~~~~~h~~~V~~l~~sp~~~~~~~l~s~s 226 (753)
T 3jro_A 149 NSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDA-QTYVLESTLEGHSDWVRDVAWSPTVLLRSYLASVS 226 (753)
T ss_dssp EEEEECCCC---------CGGGCCEEEEETTSCEEEEEEETTT-TEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEE
T ss_pred EEEEecCcccccccccccCCCCCEEEEEECCCeEEEEeccCCc-ccceeeeeecCCCCcEEEEEeccCCCCCCEEEEEe
Confidence 7788888 477677766666 544 22211 111111 1122233456788888 77666554
No 260
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=98.09 E-value=0.00022 Score=65.57 Aligned_cols=178 Identities=11% Similarity=0.047 Sum_probs=97.8
Q ss_pred eEEEeeCCCeEEEEEcCCEEEEEEcCCCeEEEEeecC-C-ccccc------------------eEEcCCCCE-EEE----
Q 018705 56 DVSVVVSKGALYTATRDGWVKYFILHNETLVNWKHID-S-QSLLG------------------LTTTKDGGV-ILC---- 110 (351)
Q Consensus 56 ~i~~d~~~g~lyv~~~~g~I~~~d~~~g~~~~~~~~~-~-~p~~g------------------l~~d~~G~L-~v~---- 110 (351)
+++|+|++..|+....++.|+.++..+++.+.+.... . .|. | ..+.++|+. .++
T Consensus 85 ~~~~spdg~~l~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~-g~~l~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~~ 163 (396)
T 3c5m_A 85 GGFISTDERAFFYVKNELNLMKVDLETLEEQVIYTVDEEWKGY-GTWVANSDCTKLVGIEILKRDWQPLTSWEKFAEFYH 163 (396)
T ss_dssp TCEECTTSSEEEEEETTTEEEEEETTTCCEEEEEECCTTEEEE-EEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHHH
T ss_pred cceECCCCCEEEEEEcCCcEEEEECCCCCcEEEEecccccCCC-CCEEEeccCCccccccccccccCCCCcceeeeeecc
Confidence 3788987778877777778999999877765443311 1 111 1 122344431 111
Q ss_pred -eCCCCeEEEcC-CC-eEEecCCCCCcccEEEcc-CCc-EEEEeCCCccCCcccccccccccCCceEEEEeCCCCeEEEe
Q 018705 111 -DNEKGLLKVTE-EG-VEAIVPDASFTNDVIAAS-DGT-LYFTVASTKYTPTDFYKDMAEGKPYGQLRKYDPKLKETTVL 185 (351)
Q Consensus 111 -d~~~gl~~~~~-~g-~~~l~~~~~~~n~l~~d~-dG~-ly~t~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~~~~~~~ 185 (351)
.....++.++. +| .+.+......+..++++| ||. |++.... ... .....|+.+|.++++.+.+
T Consensus 164 ~~~~~~l~~~d~~~g~~~~~~~~~~~~~~~~~sp~dg~~l~~~~~~-~~~-----------~~~~~l~~~d~~~~~~~~l 231 (396)
T 3c5m_A 164 TNPTCRLIKVDIETGELEVIHQDTAWLGHPIYRPFDDSTVGFCHEG-PHD-----------LVDARMWLVNEDGSNVRKI 231 (396)
T ss_dssp TCCCEEEEEEETTTCCEEEEEEESSCEEEEEEETTEEEEEEEEECS-CSS-----------SCSCCCEEEETTSCCCEES
T ss_pred CCCcceEEEEECCCCcEEeeccCCcccccceECCCCCCEEEEEecC-CCC-----------CCCceEEEEECCCCceeEe
Confidence 12234666663 45 444433324567788999 674 6554322 000 0124699999877665555
Q ss_pred ecC--ccccceEEEcCCCCEEEEEecc-e--e--EEeecCCCCceeEEeccCCCCCCceEECC-CCCEEEEE
Q 018705 186 HEG--FYFANGIALSKNEDFVVVCESW-K--R--YWLKGDRAGILDAFIENLPGGPDNINLAP-DGSFWIGL 249 (351)
Q Consensus 186 ~~~--~~~~ngi~~~~dg~~lyv~~~~-~--~--~~i~~~~~~~~~~~~~~~~g~pd~i~~d~-~G~lwva~ 249 (351)
... ...+..++++|||+.|++.... . . +++-+...++.+.+. ..++. ...+++ +|++++..
T Consensus 232 ~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~g~~~~l~-~~~~~--~~~~s~~dg~~l~~~ 300 (396)
T 3c5m_A 232 KEHAEGESCTHEFWIPDGSAMAYVSYFKGQTDRVIYKANPETLENEEVM-VMPPC--SHLMSNFDGSLMVGD 300 (396)
T ss_dssp SCCCTTEEEEEEEECTTSSCEEEEEEETTTCCEEEEEECTTTCCEEEEE-ECCSE--EEEEECSSSSEEEEE
T ss_pred eccCCCccccceEECCCCCEEEEEecCCCCccceEEEEECCCCCeEEee-eCCCC--CCCccCCCCceEEEe
Confidence 442 2245668999999966665332 1 2 555444344443333 22322 267788 89866654
No 261
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=98.07 E-value=0.0026 Score=59.68 Aligned_cols=216 Identities=11% Similarity=0.117 Sum_probs=120.2
Q ss_pred EEeeCCCeEEEEEcCCEEEEEEcCCCeEEEE-eecCCccccceEEcCCCCEEEEeCCCCeEEEc--CCC--eEEecCCCC
Q 018705 58 SVVVSKGALYTATRDGWVKYFILHNETLVNW-KHIDSQSLLGLTTTKDGGVILCDNEKGLLKVT--EEG--VEAIVPDAS 132 (351)
Q Consensus 58 ~~d~~~g~lyv~~~~g~I~~~d~~~g~~~~~-~~~~~~p~~gl~~d~~G~L~v~d~~~gl~~~~--~~g--~~~l~~~~~ 132 (351)
++..+++.+.++..+|.|..||..+++.... ........ .+++ +++++++....|.+++. .++ ...+.....
T Consensus 138 ~~~~d~~~l~~g~~dg~i~iwd~~~~~~~~~~~~h~~~v~-~l~~--~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~ 214 (435)
T 1p22_A 138 CLQYDDQKIVSGLRDNTIKIWDKNTLECKRILTGHTGSVL-CLQY--DERVIITGSSDSTVRVWDVNTGEMLNTLIHHCE 214 (435)
T ss_dssp EEECCSSEEEEEESSSCEEEEESSSCCEEEEECCCSSCEE-EEEC--CSSEEEEEETTSCEEEEESSSCCEEEEECCCCS
T ss_pred EEEECCCEEEEEeCCCeEEEEeCCCCeEEEEEcCCCCcEE-EEEE--CCCEEEEEcCCCeEEEEECCCCcEEEEEcCCCC
Confidence 3444577889999999999999877765433 22233344 6666 56655554455555555 355 444543334
Q ss_pred CcccEEEccCCcEEEEeCCCccCCcccccccccccCCceEEEEeCCCCeEE----EeecCccccceEEEcCCCCEEEEEe
Q 018705 133 FTNDVIAASDGTLYFTVASTKYTPTDFYKDMAEGKPYGQLRKYDPKLKETT----VLHEGFYFANGIALSKNEDFVVVCE 208 (351)
Q Consensus 133 ~~n~l~~d~dG~ly~t~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~~~~~----~~~~~~~~~ngi~~~~dg~~lyv~~ 208 (351)
.+.+++++ +...++.+. +|.|..||..+++.. .........+.+++ +++.++.+.
T Consensus 215 ~v~~l~~~--~~~l~s~s~-----------------dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~l~s~~ 273 (435)
T 1p22_A 215 AVLHLRFN--NGMMVTCSK-----------------DRSIAVWDMASPTDITLRRVLVGHRAAVNVVDF--DDKYIVSAS 273 (435)
T ss_dssp CEEEEECC--TTEEEEEET-----------------TSCEEEEECSSSSCCEEEEEECCCSSCEEEEEE--ETTEEEEEE
T ss_pred cEEEEEEc--CCEEEEeeC-----------------CCcEEEEeCCCCCCceeeeEecCCCCcEEEEEe--CCCEEEEEe
Confidence 56666664 334444432 467888887655421 22222233455666 667677777
Q ss_pred cce--eEEeecCCCCce-eEEeccCCCCCCceEECCCCCEEEEEecCCchhhhhhhcChhHHHHHHhccchhhcccCCCC
Q 018705 209 SWK--RYWLKGDRAGIL-DAFIENLPGGPDNINLAPDGSFWIGLIKMNQTGVRAIQKCREKWELLDAYPGLISLLLPMGS 285 (351)
Q Consensus 209 ~~~--~~~i~~~~~~~~-~~~~~~~~g~pd~i~~d~~G~lwva~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 285 (351)
.++ ++| +...++. ..+. ...+....+.+ +|++.++...
T Consensus 274 ~dg~i~vw--d~~~~~~~~~~~-~~~~~v~~~~~--~~~~l~~g~~---------------------------------- 314 (435)
T 1p22_A 274 GDRTIKVW--NTSTCEFVRTLN-GHKRGIACLQY--RDRLVVSGSS---------------------------------- 314 (435)
T ss_dssp TTSEEEEE--ETTTCCEEEEEE-CCSSCEEEEEE--ETTEEEEEET----------------------------------
T ss_pred CCCeEEEE--ECCcCcEEEEEc-CCCCcEEEEEe--CCCEEEEEeC----------------------------------
Confidence 666 444 2222222 2222 11111223344 3555554332
Q ss_pred CCceEEEEEECCCCeEEEEEECCCCCcccceeEEEEECCEEEEEecCCCeEEEEeCCC
Q 018705 286 DAGARVVKVDGNDGKIIRDFNDPDATYISFVTSAAEFDGNLYLASLQSNFIGILPLDG 343 (351)
Q Consensus 286 ~~~~~v~~~~~~~g~~~~~~~~~~g~~~~~~~~~~~~~g~L~ig~~~~~~i~~~~~~~ 343 (351)
.+.|..+|..+++.+..+..+.+ .++++..++..|..|+. .+.|..+++..
T Consensus 315 --dg~i~iwd~~~~~~~~~~~~h~~----~v~~~~~~~~~l~sg~~-dg~i~vwd~~~ 365 (435)
T 1p22_A 315 --DNTIRLWDIECGACLRVLEGHEE----LVRCIRFDNKRIVSGAY-DGKIKVWDLVA 365 (435)
T ss_dssp --TSCEEEEETTTCCEEEEECCCSS----CEEEEECCSSEEEEEET-TSCEEEEEHHH
T ss_pred --CCeEEEEECCCCCEEEEEeCCcC----cEEEEEecCCEEEEEeC-CCcEEEEECCC
Confidence 23477788756888877765432 46666666666777765 66788888643
No 262
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=98.06 E-value=0.00033 Score=64.32 Aligned_cols=191 Identities=17% Similarity=0.172 Sum_probs=97.9
Q ss_pred CceEEEeeCCCeEE-EEEc--CCEEEEEEcCCCeEEEEeecCCccccceEEcCCCC-EEEEeCCCCeEEEcC-CC-eEEe
Q 018705 54 PEDVSVVVSKGALY-TATR--DGWVKYFILHNETLVNWKHIDSQSLLGLTTTKDGG-VILCDNEKGLLKVTE-EG-VEAI 127 (351)
Q Consensus 54 pe~i~~d~~~g~ly-v~~~--~g~I~~~d~~~g~~~~~~~~~~~p~~gl~~d~~G~-L~v~d~~~gl~~~~~-~g-~~~l 127 (351)
..+++++|++..++ +... +..|+.++..+++.+.+.........++.+.++|+ |+.+.....++.++. ++ .+.+
T Consensus 38 ~~~~~~SpdG~~l~~~~~~~g~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~spdg~~l~~~~~~~~l~~~d~~~~~~~~~ 117 (396)
T 3c5m_A 38 FYQKCFTQDGKKLLFAGDFDGNRNYYLLNLETQQAVQLTEGKGDNTFGGFISTDERAFFYVKNELNLMKVDLETLEEQVI 117 (396)
T ss_dssp TTSCCBCTTSCEEEEEECTTSSCEEEEEETTTTEEEECCCSSCBCTTTCEECTTSSEEEEEETTTEEEEEETTTCCEEEE
T ss_pred eecCcCCCCCCEEEEEEecCCCceEEEEECCCCcEEEeecCCCCccccceECCCCCEEEEEEcCCcEEEEECCCCCcEEE
Confidence 56778887777654 4433 24799999888877665443333331478899996 545554445787775 45 4443
Q ss_pred cCCCCCcccEEEccCCc-EEEEeCC---------CccCCcccccccc---cccCCceEEEEeCCCCeEEEeecCccccce
Q 018705 128 VPDASFTNDVIAASDGT-LYFTVAS---------TKYTPTDFYKDMA---EGKPYGQLRKYDPKLKETTVLHEGFYFANG 194 (351)
Q Consensus 128 ~~~~~~~n~l~~d~dG~-ly~t~~~---------~~~~~~~~~~~~~---~~~~~g~l~~~d~~~~~~~~~~~~~~~~ng 194 (351)
... +.+ ..++|. |.++... ..+.......-+. .......|+.+|.++++.+.+.........
T Consensus 118 ~~~---~~~--~~~~g~~l~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~~~~~~~~l~~~d~~~g~~~~~~~~~~~~~~ 192 (396)
T 3c5m_A 118 YTV---DEE--WKGYGTWVANSDCTKLVGIEILKRDWQPLTSWEKFAEFYHTNPTCRLIKVDIETGELEVIHQDTAWLGH 192 (396)
T ss_dssp EEC---CTT--EEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHHHTCCCEEEEEEETTTCCEEEEEEESSCEEE
T ss_pred Eec---ccc--cCCCCCEEEeccCCccccccccccccCCCCcceeeeeeccCCCcceEEEEECCCCcEEeeccCCccccc
Confidence 321 111 223332 2211100 0000000000000 012345799999988887766654445667
Q ss_pred EEEcC-CCCEEEEEecc------eeEEeecCCCCceeEEeccCCC-CCCceEECCCCC-EEEEE
Q 018705 195 IALSK-NEDFVVVCESW------KRYWLKGDRAGILDAFIENLPG-GPDNINLAPDGS-FWIGL 249 (351)
Q Consensus 195 i~~~~-dg~~lyv~~~~------~~~~i~~~~~~~~~~~~~~~~g-~pd~i~~d~~G~-lwva~ 249 (351)
++++| |++.+++.... .++++-+...+....+....++ .+..+.++++|+ |+.+.
T Consensus 193 ~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~spdg~~l~~~~ 256 (396)
T 3c5m_A 193 PIYRPFDDSTVGFCHEGPHDLVDARMWLVNEDGSNVRKIKEHAEGESCTHEFWIPDGSAMAYVS 256 (396)
T ss_dssp EEEETTEEEEEEEEECSCSSSCSCCCEEEETTSCCCEESSCCCTTEEEEEEEECTTSSCEEEEE
T ss_pred ceECCCCCCEEEEEecCCCCCCCceEEEEECCCCceeEeeccCCCccccceEECCCCCEEEEEe
Confidence 89999 77756554322 1344433222232222211111 123458899997 44443
No 263
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=98.06 E-value=0.0028 Score=63.69 Aligned_cols=181 Identities=8% Similarity=-0.016 Sum_probs=97.9
Q ss_pred ceEEEeeCCCeEEE-EEcCC----EEEEEEcCCCeEEEEeecCCccccceEEcCCCC-EEEEeCCCC-------------
Q 018705 55 EDVSVVVSKGALYT-ATRDG----WVKYFILHNETLVNWKHIDSQSLLGLTTTKDGG-VILCDNEKG------------- 115 (351)
Q Consensus 55 e~i~~d~~~g~lyv-~~~~g----~I~~~d~~~g~~~~~~~~~~~p~~gl~~d~~G~-L~v~d~~~g------------- 115 (351)
.+++++|++..+.. ....| .|+.+|..+|+............ ++++.+||+ |+++.....
T Consensus 128 ~~~~~SPDg~~la~~~~~~G~~~~~i~v~d~~tg~~~~~~~~~~~~~-~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~ 206 (710)
T 2xdw_A 128 RGYAFSEDGEYFAYGLSASGSDWVTIKFMKVDGAKELPDVLERVKFS-CMAWTHDGKGMFYNAYPQQDGKSDGTETSTNL 206 (710)
T ss_dssp EEEEECTTSSEEEEEEEETTCSCEEEEEEETTTTEEEEEEEEEECSC-CEEECTTSSEEEEEECCCCSSCCSSSCCCCCC
T ss_pred EEEEECCCCCEEEEEEcCCCCceEEEEEEECCCCCCCcccccCcccc-eEEEEeCCCEEEEEEECCccccccccccccCC
Confidence 46789977776644 44344 79999998887754332222345 799999995 555543322
Q ss_pred ---eEEEcC-CC-e--EEe-cCC--CCCcccEEEccCCc-EEEEeCCCccCCcccccccccccCCceEEEEeCCC-----
Q 018705 116 ---LLKVTE-EG-V--EAI-VPD--ASFTNDVIAASDGT-LYFTVASTKYTPTDFYKDMAEGKPYGQLRKYDPKL----- 179 (351)
Q Consensus 116 ---l~~~~~-~g-~--~~l-~~~--~~~~n~l~~d~dG~-ly~t~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~----- 179 (351)
++..+. ++ . ..+ ... .....++.+++||+ |+++..... .....|+.+|.++
T Consensus 207 ~~~v~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~-------------~~~~~l~~~d~~~~~~~~ 273 (710)
T 2xdw_A 207 HQKLYYHVLGTDQSEDILCAEFPDEPKWMGGAELSDDGRYVLLSIREGC-------------DPVNRLWYCDLQQESNGI 273 (710)
T ss_dssp CCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECSS-------------SSCCEEEEEEGGGSSSSS
T ss_pred CCEEEEEECCCCcccceEEeccCCCCeEEEEEEEcCCCCEEEEEEEccC-------------CCccEEEEEECccccccc
Confidence 565553 33 1 232 221 13456789999995 444432100 0134788888765
Q ss_pred -C--eEEEeecCccccceEEEcCCCCEEEEEecce----eEEeecCCCCc---eeEEeccCCC-CCCceEECCCCCEEEE
Q 018705 180 -K--ETTVLHEGFYFANGIALSKNEDFVVVCESWK----RYWLKGDRAGI---LDAFIENLPG-GPDNINLAPDGSFWIG 248 (351)
Q Consensus 180 -~--~~~~~~~~~~~~ngi~~~~dg~~lyv~~~~~----~~~i~~~~~~~---~~~~~~~~~g-~pd~i~~d~~G~lwva 248 (351)
+ +.+.+....... .-.++++|+.+|+..... ++++.+...+. .+.+....+. ...++.+.+++.++++
T Consensus 274 ~~~~~~~~l~~~~~~~-~~~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~lv~~ 352 (710)
T 2xdw_A 274 TGILKWVKLIDNFEGE-YDYVTNEGTVFTFKTNRHSPNYRLINIDFTDPEESKWKVLVPEHEKDVLEWVACVRSNFLVLC 352 (710)
T ss_dssp CSSCCCEEEECSSSSC-EEEEEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEECCCSSCEEEEEEEETTTEEEEE
T ss_pred CCccceEEeeCCCCcE-EEEEeccCCEEEEEECCCCCCCEEEEEeCCCCCcccceeccCCCCCCeEEEEEEEcCCEEEEE
Confidence 4 344444332222 235788999888865432 45443322222 2333322211 1234555555666666
Q ss_pred Ee
Q 018705 249 LI 250 (351)
Q Consensus 249 ~~ 250 (351)
..
T Consensus 353 ~~ 354 (710)
T 2xdw_A 353 YL 354 (710)
T ss_dssp EE
T ss_pred EE
Confidence 54
No 264
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=98.04 E-value=0.0069 Score=54.72 Aligned_cols=137 Identities=10% Similarity=0.071 Sum_probs=81.2
Q ss_pred ccccceEEcC--CCCEEEEeCCCCeEEEc--CCC-e-EEecCC-CCCcccEEEccCCcEEEEeCCCccCCcccccccccc
Q 018705 94 QSLLGLTTTK--DGGVILCDNEKGLLKVT--EEG-V-EAIVPD-ASFTNDVIAASDGTLYFTVASTKYTPTDFYKDMAEG 166 (351)
Q Consensus 94 ~p~~gl~~d~--~G~L~v~d~~~gl~~~~--~~g-~-~~l~~~-~~~~n~l~~d~dG~ly~t~~~~~~~~~~~~~~~~~~ 166 (351)
... .+++++ +|+++++....+.+++. .++ . ...... ...++.++++|+|.+.++.+.
T Consensus 127 ~v~-~~~~~~~~~~~~l~s~s~dg~i~~wd~~~~~~~~~~~~~~~~~i~~~~~~pdg~~lasg~~--------------- 190 (343)
T 3lrv_A 127 EII-YMYGHNEVNTEYFIWADNRGTIGFQSYEDDSQYIVHSAKSDVEYSSGVLHKDSLLLALYSP--------------- 190 (343)
T ss_dssp CEE-EEECCC---CCEEEEEETTCCEEEEESSSSCEEEEECCCSSCCCCEEEECTTSCEEEEECT---------------
T ss_pred CEE-EEEcCCCCCCCEEEEEeCCCcEEEEECCCCcEEEEEecCCCCceEEEEECCCCCEEEEEcC---------------
Confidence 355 899999 89887755555655555 355 3 333222 246889999999988777544
Q ss_pred cCCceEEEEeCCCCeEE--Eeec-CccccceEEEcCCCCEEEEEecce-eEEe-ecCC-CCceeEEeccCCCCCC---ce
Q 018705 167 KPYGQLRKYDPKLKETT--VLHE-GFYFANGIALSKNEDFVVVCESWK-RYWL-KGDR-AGILDAFIENLPGGPD---NI 237 (351)
Q Consensus 167 ~~~g~l~~~d~~~~~~~--~~~~-~~~~~ngi~~~~dg~~lyv~~~~~-~~~i-~~~~-~~~~~~~~~~~~g~pd---~i 237 (351)
+|.|..||..+++.. .+.. .....+.++++|++..|..+..+. ++|= .... ....+.+.. +..+- .+
T Consensus 191 --dg~i~iwd~~~~~~~~~~~~~~h~~~v~~l~fs~~g~~l~s~~~~~v~iwd~~~~~~~~~~~~~~~--~~~~~~~~~~ 266 (343)
T 3lrv_A 191 --DGILDVYNLSSPDQASSRFPVDEEAKIKEVKFADNGYWMVVECDQTVVCFDLRKDVGTLAYPTYTI--PEFKTGTVTY 266 (343)
T ss_dssp --TSCEEEEESSCTTSCCEECCCCTTSCEEEEEECTTSSEEEEEESSBEEEEETTSSTTCBSSCCCBC-------CCEEE
T ss_pred --CCEEEEEECCCCCCCccEEeccCCCCEEEEEEeCCCCEEEEEeCCeEEEEEcCCCCcceeeccccc--ccccccceEE
Confidence 568999998776543 3322 244567899999999777766444 5552 1111 011111100 11222 38
Q ss_pred EECCCCCEEEEEe
Q 018705 238 NLAPDGSFWIGLI 250 (351)
Q Consensus 238 ~~d~~G~lwva~~ 250 (351)
+++++|++.++..
T Consensus 267 ~~~~~g~~l~~~s 279 (343)
T 3lrv_A 267 DIDDSGKNMIAYS 279 (343)
T ss_dssp EECTTSSEEEEEE
T ss_pred EECCCCCEEEEec
Confidence 9999998776643
No 265
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=98.03 E-value=0.0018 Score=58.45 Aligned_cols=176 Identities=7% Similarity=0.023 Sum_probs=99.6
Q ss_pred CCceEEEeeCCCeEEEEE-cC--C--EEEEEEcCCCeEEEEeecCCccccceEEcCCCC-EEEEeC--------------
Q 018705 53 HPEDVSVVVSKGALYTAT-RD--G--WVKYFILHNETLVNWKHIDSQSLLGLTTTKDGG-VILCDN-------------- 112 (351)
Q Consensus 53 ~pe~i~~d~~~g~lyv~~-~~--g--~I~~~d~~~g~~~~~~~~~~~p~~gl~~d~~G~-L~v~d~-------------- 112 (351)
...+++++|++..++... .. + .|+.++..+++.+....... .. .+++.++|+ |+++..
T Consensus 60 ~~~~~~~SpDg~~la~~~~~~~~~~~~l~~~~~~~g~~~~l~~~~~-~~-~~~wspdg~~l~~~~~~~~~~~~~~~~~~~ 137 (347)
T 2gop_A 60 NATMPRISPDGKKIAFMRANEEKKVSEIWVADLETLSSKKILEAKN-IR-SLEWNEDSRKLLIVGFKRREDEDFIFEDDV 137 (347)
T ss_dssp SCEEEEECTTSSEEEEEEEETTTTEEEEEEEETTTTEEEEEEEESE-EE-EEEECTTSSEEEEEEECCCC---------C
T ss_pred cCCCeEECCCCCEEEEEEeccCCCcceEEEEECCCCceEEEEcCCC-cc-ceeECCCCCEEEEEEccCCCcCCcEEEccc
Confidence 356789998777665433 32 3 49999987887765544434 66 889999996 554431
Q ss_pred -------------CCCeEEEcC-CC-e-EEecCCCCCcccEEEccCCcEEEEeCCCccCCcccccccccccCCceEEEEe
Q 018705 113 -------------EKGLLKVTE-EG-V-EAIVPDASFTNDVIAASDGTLYFTVASTKYTPTDFYKDMAEGKPYGQLRKYD 176 (351)
Q Consensus 113 -------------~~gl~~~~~-~g-~-~~l~~~~~~~n~l~~d~dG~ly~t~~~~~~~~~~~~~~~~~~~~~g~l~~~d 176 (351)
...++.++. +| . +.+.. . .+.++++++|| ++++.....- .. ...+...|+.+|
T Consensus 138 ~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~l~~-~-~~~~~~~spdg-~~~~~~~~~~--~~------~~~~~~~l~~~d 206 (347)
T 2gop_A 138 PAWFDDLGFFDGEKTTFWIFDTESEEVIEEFEK-P-RFSSGIWHRDK-IVVNVPHREI--IP------QYFKFWDIYIWE 206 (347)
T ss_dssp CCC---------CEEEEEEEETTTTEEEEEEEE-E-TTCEEEEETTE-EEEEEECCCS--SC------CSSCCEEEEEEE
T ss_pred ceeecCcccccCccceEEEEECCCCeEEeeecC-C-CcccccCCCCe-EEEEEecccc--cc------cccccccEEEeC
Confidence 134666664 55 5 55544 2 67788999999 7665532100 00 000134799999
Q ss_pred CCCCeEEEeecCccccceEEEcCCCCEEEEEec-c------e-eEEeecCCCCceeEEeccCCCCCCc-eEECCCCCEEE
Q 018705 177 PKLKETTVLHEGFYFANGIALSKNEDFVVVCES-W------K-RYWLKGDRAGILDAFIENLPGGPDN-INLAPDGSFWI 247 (351)
Q Consensus 177 ~~~~~~~~~~~~~~~~ngi~~~~dg~~lyv~~~-~------~-~~~i~~~~~~~~~~~~~~~~g~pd~-i~~d~~G~lwv 247 (351)
+++.+.+... ... ..++|||+.|++... . . .+++-+ .++...+.........+ +.++ +| +++
T Consensus 207 --~~~~~~l~~~-~~~--~~~spdg~~l~~~~~~~~~~~~~~~~l~~~d--~~~~~~l~~~~~~~~~~~~~~s-dg-~~~ 277 (347)
T 2gop_A 207 --DGKEEKMFEK-VSF--YAVDSDGERILLYGKPEKKYMSEHNKLYIYD--GKEVMGILDEVDRGVGQAKIKD-GK-VYF 277 (347)
T ss_dssp --TTEEEEEEEE-ESE--EEEEECSSCEEEEECCSSSCCCSSCEEEEEC--SSCEEESSTTCCSEEEEEEEET-TE-EEE
T ss_pred --CCceEEeccC-cce--eeECCCCCEEEEEEccccCCccccceEEEEC--CCceEeccccCCcccCCccEEc-Cc-EEE
Confidence 5776665543 222 233899997766442 2 1 455543 23333332221222233 6677 77 666
Q ss_pred EEe
Q 018705 248 GLI 250 (351)
Q Consensus 248 a~~ 250 (351)
...
T Consensus 278 ~~~ 280 (347)
T 2gop_A 278 TLF 280 (347)
T ss_dssp EEE
T ss_pred EEe
Confidence 544
No 266
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=98.03 E-value=0.0012 Score=61.66 Aligned_cols=141 Identities=9% Similarity=0.118 Sum_probs=85.7
Q ss_pred CCceEEEeeCCCeEEEEEcCCEEEEEEcC---CCeEEEEee-------------cCCccccceE--EcCCCCEEEEeCCC
Q 018705 53 HPEDVSVVVSKGALYTATRDGWVKYFILH---NETLVNWKH-------------IDSQSLLGLT--TTKDGGVILCDNEK 114 (351)
Q Consensus 53 ~pe~i~~d~~~g~lyv~~~~g~I~~~d~~---~g~~~~~~~-------------~~~~p~~gl~--~d~~G~L~v~d~~~ 114 (351)
...++++.+++..++++..||.|..||.. +++...... ...... .+. +.+++.++++....
T Consensus 113 ~v~~~~~~~~~~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~~~~d 191 (437)
T 3gre_A 113 TVTQITMIPNFDAFAVSSKDGQIIVLKVNHYQQESEVKFLNCECIRKINLKNFGKNEYAV-RMRAFVNEEKSLLVALTNL 191 (437)
T ss_dssp CEEEEEECTTSSEEEEEETTSEEEEEEEEEEEETTEEEEEEEEEEEEEEGGGGSSCCCEE-EEEEEECSSCEEEEEEETT
T ss_pred CEEEEEEeCCCCEEEEEeCCCEEEEEEeccccCCceeeccccceeEEEEccCcccccCce-EEEEEEcCCCCEEEEEeCC
Confidence 45688999777788999999999988863 333221110 111222 333 44677666555555
Q ss_pred CeEEEc--CCC--eEEecC--CCCCcccEEEccCCcEEEEeCCCccCCcccccccccccCCceEEEEeCCCCeEEEee--
Q 018705 115 GLLKVT--EEG--VEAIVP--DASFTNDVIAASDGTLYFTVASTKYTPTDFYKDMAEGKPYGQLRKYDPKLKETTVLH-- 186 (351)
Q Consensus 115 gl~~~~--~~g--~~~l~~--~~~~~n~l~~d~dG~ly~t~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~~~~~~~~-- 186 (351)
+.+++. .++ ...+.. ....+++++++++|.+.++.+. +|.|..||..+++.....
T Consensus 192 ~~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~-----------------dg~i~iwd~~~~~~~~~~~~ 254 (437)
T 3gre_A 192 SRVIIFDIRTLERLQIIENSPRHGAVSSICIDEECCVLILGTT-----------------RGIIDIWDIRFNVLIRSWSF 254 (437)
T ss_dssp SEEEEEETTTCCEEEEEECCGGGCCEEEEEECTTSCEEEEEET-----------------TSCEEEEETTTTEEEEEEBC
T ss_pred CeEEEEeCCCCeeeEEEccCCCCCceEEEEECCCCCEEEEEcC-----------------CCeEEEEEcCCccEEEEEec
Confidence 655555 345 455544 2367899999999987776654 467999998777654322
Q ss_pred cCccccceEEEc----CCCCEEEEEecce
Q 018705 187 EGFYFANGIALS----KNEDFVVVCESWK 211 (351)
Q Consensus 187 ~~~~~~ngi~~~----~dg~~lyv~~~~~ 211 (351)
........++++ +++..+..+..++
T Consensus 255 ~~~~~v~~~~~~~~~s~~~~~l~s~~~dg 283 (437)
T 3gre_A 255 GDHAPITHVEVCQFYGKNSVIVVGGSSKT 283 (437)
T ss_dssp TTCEEEEEEEECTTTCTTEEEEEEESTTE
T ss_pred CCCCceEEEEeccccCCCccEEEEEcCCC
Confidence 222334567444 5665555555555
No 267
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=98.03 E-value=0.011 Score=59.26 Aligned_cols=55 Identities=16% Similarity=0.209 Sum_probs=37.4
Q ss_pred CceEEEEEECCCCeEEEEEECCCCCcccceeEEEEECCEEEEEecC-----------------CCeEEEEeCCC
Q 018705 287 AGARVVKVDGNDGKIIRDFNDPDATYISFVTSAAEFDGNLYLASLQ-----------------SNFIGILPLDG 343 (351)
Q Consensus 287 ~~~~v~~~~~~~g~~~~~~~~~~g~~~~~~~~~~~~~g~L~ig~~~-----------------~~~i~~~~~~~ 343 (351)
..+.+..+|.++|+++-++..+.+..... .....+|+.|+.... ++.+..|.++.
T Consensus 496 ~dg~l~a~D~~tG~~lw~~~~~~~~~~~p--~~y~~~G~~~v~~~~G~~~~~~~~~~~~~~~~~~~l~~f~l~~ 567 (677)
T 1kb0_A 496 ADGRLVAYHAATGEKLWEAPTGTGVVAAP--STYMVDGRQYVSVAVGWGGVYGLAARATERQGPGTVYTFVVGG 567 (677)
T ss_dssp TTSEEEEEETTTCCEEEEEECSSCCCSCC--EEEEETTEEEEEEEECCCHHHHHHCCSCSCCCCCEEEEEEETC
T ss_pred CCCcEEEEECCCCceeeeeeCCCCcccCC--EEEEeCCEEEEEEeccCCccccccccccccCCCCeEEEEeccc
Confidence 34678999987899999998765532221 222467888886522 37888888873
No 268
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=97.99 E-value=7.3e-05 Score=75.15 Aligned_cols=132 Identities=7% Similarity=-0.023 Sum_probs=84.0
Q ss_pred CceEEEeeCCCeEEEEEcCCEEEEEEcCCCeEEEEeecCC----ccccceEEcCCCCEEE-EeC---------CCCeEEE
Q 018705 54 PEDVSVVVSKGALYTATRDGWVKYFILHNETLVNWKHIDS----QSLLGLTTTKDGGVIL-CDN---------EKGLLKV 119 (351)
Q Consensus 54 pe~i~~d~~~g~lyv~~~~g~I~~~d~~~g~~~~~~~~~~----~p~~gl~~d~~G~L~v-~d~---------~~gl~~~ 119 (351)
+.+++|.+++ .++....++.|+.+|..+++.+....... ... .+++++||+..+ +.. ...++.+
T Consensus 18 ~~~~~~s~dg-~~~~~~~d~~i~~~~~~~g~~~~~~~~~~~~~~~~~-~~~~SpDg~~la~~~~~~~~~~~s~~~~i~~~ 95 (719)
T 1z68_A 18 TFFPNWISGQ-EYLHQSADNNIVLYNIETGQSYTILSNRTMKSVNAS-NYGLSPDRQFVYLESDYSKLWRYSYTATYYIY 95 (719)
T ss_dssp CCCCEESSSS-EEEEECTTSCEEEEESSSCCEEEEECHHHHHTTTCS-EEEECTTSSEEEEEEEEEECSSSCEEEEEEEE
T ss_pred CCccEECCCC-eEEEEcCCCCEEEEEcCCCcEEEEEcccccccccee-eEEECCCCCeEEEEecCceeEEeecceEEEEE
Confidence 4478898644 55555578999999998887765543221 245 789999997443 332 1234444
Q ss_pred cC-CC-e---EEecCCCCCcccEEEccCCc-EEEEeCCCccCCcccccccccccCCceEEEEeCCCCeEEEeecCc----
Q 018705 120 TE-EG-V---EAIVPDASFTNDVIAASDGT-LYFTVASTKYTPTDFYKDMAEGKPYGQLRKYDPKLKETTVLHEGF---- 189 (351)
Q Consensus 120 ~~-~g-~---~~l~~~~~~~n~l~~d~dG~-ly~t~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~~~~~~~~~~~---- 189 (351)
+. +| . +.+. ..+.+++++|||+ |.++. .+.|+.++..+++...+....
T Consensus 96 d~~~g~~~~~~~l~---~~~~~~~~SPDG~~la~~~-------------------~~~i~~~~~~~g~~~~l~~~~~~~~ 153 (719)
T 1z68_A 96 DLSNGEFVRGNELP---RPIQYLCWSPVGSKLAYVY-------------------QNNIYLKQRPGDPPFQITFNGRENK 153 (719)
T ss_dssp ETTTTEECCSSCCC---SSBCCEEECSSTTCEEEEE-------------------TTEEEEESSTTSCCEECCCCCBTTT
T ss_pred ECCCCccccceecC---cccccceECCCCCEEEEEE-------------------CCeEEEEeCCCCCcEEEecCCCcCC
Confidence 53 44 3 2222 4578899999995 54442 247888888777655443221
Q ss_pred ---------------cccceEEEcCCCCEEEEEec
Q 018705 190 ---------------YFANGIALSKNEDFVVVCES 209 (351)
Q Consensus 190 ---------------~~~ngi~~~~dg~~lyv~~~ 209 (351)
....++++||||+.|+++..
T Consensus 154 v~~g~~~~v~~ee~~~~~~~~~wSPDG~~la~~~~ 188 (719)
T 1z68_A 154 IFNGIPDWVYEEEMLATKYALWWSPNGKFLAYAEF 188 (719)
T ss_dssp EEESSCCHHHHHHTTCSSCCEEECTTSSEEEEEEE
T ss_pred eEcccccceeeeecccCcccEEECCCCCEEEEEEE
Confidence 11247999999998877553
No 269
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=97.96 E-value=0.00095 Score=59.36 Aligned_cols=145 Identities=10% Similarity=0.014 Sum_probs=86.8
Q ss_pred CCCceEEEeeC--CCeEEEEEcCCEEEEEEcCCCe----------EEEEeecCCccccceEEcCC--CCEEEEeCCCCeE
Q 018705 52 NHPEDVSVVVS--KGALYTATRDGWVKYFILHNET----------LVNWKHIDSQSLLGLTTTKD--GGVILCDNEKGLL 117 (351)
Q Consensus 52 ~~pe~i~~d~~--~g~lyv~~~~g~I~~~d~~~g~----------~~~~~~~~~~p~~gl~~d~~--G~L~v~d~~~gl~ 117 (351)
....++++.+. +..++++..||.|..||..+++ ...+........ .+++.++ ++++++....+.+
T Consensus 58 ~~v~~~~~~~~~d~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~v~-~~~~~~~~~~~~l~~~~~dg~v 136 (351)
T 3f3f_A 58 SSIVAIDWASPEYGRIIASASYDKTVKLWEEDPDQEECSGRRWNKLCTLNDSKGSLY-SVKFAPAHLGLKLACLGNDGIL 136 (351)
T ss_dssp SCEEEEEECCGGGCSEEEEEETTSCEEEEEECTTSCTTSSCSEEEEEEECCCSSCEE-EEEECCGGGCSEEEEEETTCEE
T ss_pred CcEEEEEEcCCCCCCEEEEEcCCCeEEEEecCCCcccccccCcceeeeecccCCcee-EEEEcCCCCCcEEEEecCCCcE
Confidence 34568899863 6788889999999999986652 223333334556 8999988 8766654455555
Q ss_pred EEc--CCC--eEEec-------------CCCCCcccEEEccC---CcEEEEeCCCccCCcccccccccccCCceEEEEeC
Q 018705 118 KVT--EEG--VEAIV-------------PDASFTNDVIAASD---GTLYFTVASTKYTPTDFYKDMAEGKPYGQLRKYDP 177 (351)
Q Consensus 118 ~~~--~~g--~~~l~-------------~~~~~~n~l~~d~d---G~ly~t~~~~~~~~~~~~~~~~~~~~~g~l~~~d~ 177 (351)
++. .++ ...+. .....+..+++.|+ +.++++... .+.+..++.
T Consensus 137 ~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~l~~~~~-----------------~~~~~~~~~ 199 (351)
T 3f3f_A 137 RLYDALEPSDLRSWTLTSEMKVLSIPPANHLQSDFCLSWCPSRFSPEKLAVSAL-----------------EQAIIYQRG 199 (351)
T ss_dssp EEEECSSTTCTTCCEEEEEEESCSCCCSSCSCCCEEEEECCCSSSCCEEEEEET-----------------TEEEEEEEC
T ss_pred EEecCCChHHhccccccccccccccccCCcccceeEEEeccCCCCCcEEEEecC-----------------CCcEEEEcc
Confidence 554 232 11110 01146677888886 655554433 345555555
Q ss_pred CCCeEEEee---cCccccceEEEcCCC----CEEEEEecce--eEE
Q 018705 178 KLKETTVLH---EGFYFANGIALSKNE----DFVVVCESWK--RYW 214 (351)
Q Consensus 178 ~~~~~~~~~---~~~~~~ngi~~~~dg----~~lyv~~~~~--~~~ 214 (351)
..++...+. ..-.....++++|++ +.++.+..++ ++|
T Consensus 200 ~~~~~~~~~~~~~h~~~i~~~~~~p~~~~~~~~l~s~~~dg~i~iw 245 (351)
T 3f3f_A 200 KDGKLHVAAKLPGHKSLIRSISWAPSIGRWYQLIATGCKDGRIRIF 245 (351)
T ss_dssp TTSCEEEEEECCCCCSCEEEEEECCCSSCSSEEEEEEETTSCEEEE
T ss_pred CCCceeeeeecCCCCcceeEEEECCCCCCcceEEEEEcCCCeEEEE
Confidence 555543222 223346789999998 6566666555 444
No 270
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=97.96 E-value=0.012 Score=57.73 Aligned_cols=46 Identities=22% Similarity=0.371 Sum_probs=30.9
Q ss_pred CCceEEEEEECCCCeEEEEEECCCCCcccceeEEEEECCEEEEEecCC
Q 018705 286 DAGARVVKVDGNDGKIIRDFNDPDATYISFVTSAAEFDGNLYLASLQS 333 (351)
Q Consensus 286 ~~~~~v~~~~~~~g~~~~~~~~~~g~~~~~~~~~~~~~g~L~ig~~~~ 333 (351)
...+.+..+|.++|+.+-.+..+.+.. ....+...+|++|+++..+
T Consensus 482 ~~dg~l~a~D~~tG~~lw~~~~~~~~~--~~p~~~~~~G~~yv~~~~G 527 (571)
T 2ad6_A 482 TLDGYLKALDNKDGKELWNFKMPSGGI--GSPMTYSFKGKQYIGSMYG 527 (571)
T ss_dssp CTTSEEEEEETTTCCEEEEEECSSCCC--SCCEEEEETTEEEEEEEEC
T ss_pred cCCCeEEEEECCCCCEEEEEeCCCCcE--eeeEEEEECCEEEEEEECC
Confidence 334679999987999998887654421 1122234789999987533
No 271
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=97.96 E-value=0.004 Score=60.69 Aligned_cols=100 Identities=7% Similarity=-0.050 Sum_probs=66.3
Q ss_pred cccceEEcCCCCEEEEeCCCCeEEEcC-CC-eEEecCCC-----CCcccEEEccCCcEEEEeCCCccCCccccccccccc
Q 018705 95 SLLGLTTTKDGGVILCDNEKGLLKVTE-EG-VEAIVPDA-----SFTNDVIAASDGTLYFTVASTKYTPTDFYKDMAEGK 167 (351)
Q Consensus 95 p~~gl~~d~~G~L~v~d~~~gl~~~~~-~g-~~~l~~~~-----~~~n~l~~d~dG~ly~t~~~~~~~~~~~~~~~~~~~ 167 (351)
.. ++++.++|...++....|.+++.. ++ ...+. .. ....+++++|||++.++.+.
T Consensus 88 V~-~vawSPdG~~LAs~s~dg~V~iwd~~~~l~~l~-~~~~~~~~sv~svafSPDG~~LAsgs~---------------- 149 (588)
T 2j04_A 88 PR-VCKPSPIDDWMAVLSNNGNVSVFKDNKMLTNLD-SKGNLSSRTYHCFEWNPIESSIVVGNE---------------- 149 (588)
T ss_dssp EE-EEEECSSSSCEEEEETTSCEEEEETTEEEEECC-CSSCSTTTCEEEEEECSSSSCEEEEET----------------
T ss_pred EE-EEEECCCCCEEEEEeCCCcEEEEeCCceeeecc-CCCccccccEEEEEEcCCCCEEEEEcC----------------
Confidence 45 889999997666555566666664 55 55554 32 24888999999976655543
Q ss_pred CCceEEEEeCCCCe--------EEEeecC----ccccceEEEcCCCCEEEEEecce--eEEe
Q 018705 168 PYGQLRKYDPKLKE--------TTVLHEG----FYFANGIALSKNEDFVVVCESWK--RYWL 215 (351)
Q Consensus 168 ~~g~l~~~d~~~~~--------~~~~~~~----~~~~ngi~~~~dg~~lyv~~~~~--~~~i 215 (351)
+|.|..||.+++. +..+... ......++++||| +..+..++ ++|-
T Consensus 150 -DGtVkIWd~~~~~l~~~~~i~l~ti~~~~~gh~~~V~sVawSPdg--Laass~D~tVrlWd 208 (588)
T 2j04_A 150 -DGELQFFSIRKNSENTPEFYFESSIRLSDAGSKDWVTHIVWYEDV--LVAALSNNSVFSMT 208 (588)
T ss_dssp -TSEEEEEECCCCTTTCCCCEEEEEEECSCTTCCCCEEEEEEETTE--EEEEETTCCEEEEC
T ss_pred -CCEEEEEECCCCccccccceeeeeeecccccccccEEEEEEcCCc--EEEEeCCCeEEEEE
Confidence 5789999987764 2333211 2356789999999 55555566 6663
No 272
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=97.93 E-value=0.02 Score=56.43 Aligned_cols=44 Identities=16% Similarity=0.225 Sum_probs=30.0
Q ss_pred CCceEEEEEECCCCeEEEEEECCCCCcccceeEEEEECCEEEEEec
Q 018705 286 DAGARVVKVDGNDGKIIRDFNDPDATYISFVTSAAEFDGNLYLASL 331 (351)
Q Consensus 286 ~~~~~v~~~~~~~g~~~~~~~~~~g~~~~~~~~~~~~~g~L~ig~~ 331 (351)
...+.+..||.++|+++-.+..+.+..... .....+|++|++..
T Consensus 491 t~dg~l~A~D~~tG~~lW~~~l~~g~~~~P--~~y~~~G~qyv~~~ 534 (599)
T 1w6s_A 491 TLDGYLKARDSDTGDLLWKFKIPSGAIGYP--MTYTHKGTQYVAIY 534 (599)
T ss_dssp CTTSEEEEEETTTCCEEEEEECSSCCCSCC--EEEEETTEEEEEEE
T ss_pred CCCCeEEEEECCCCCEEEEeeCCCCcEecc--EEEEeCCEEEEEEE
Confidence 445678999988999998887665532221 22357888888754
No 273
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=97.92 E-value=0.00057 Score=64.25 Aligned_cols=145 Identities=9% Similarity=0.034 Sum_probs=93.3
Q ss_pred CCCceEEEeeCC-CeEEEEEcCCEEEEEEcCCCe----EEEEeecCCccccceEEcCCCC-EEEEeCCCCeEEEc--CC-
Q 018705 52 NHPEDVSVVVSK-GALYTATRDGWVKYFILHNET----LVNWKHIDSQSLLGLTTTKDGG-VILCDNEKGLLKVT--EE- 122 (351)
Q Consensus 52 ~~pe~i~~d~~~-g~lyv~~~~g~I~~~d~~~g~----~~~~~~~~~~p~~gl~~d~~G~-L~v~d~~~gl~~~~--~~- 122 (351)
....+++++|.+ ..+.++..+|.|..||..++. ...+......+. .+++.+++. ++++....+.+++. ..
T Consensus 232 ~~v~~v~~~p~~~~~l~s~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~-~i~~~p~~~~~l~tg~~dg~v~vwd~~~~ 310 (430)
T 2xyi_A 232 AVVEDVAWHLLHESLFGSVADDQKLMIWDTRNNNTSKPSHTVDAHTAEVN-CLSFNPYSEFILATGSADKTVALWDLRNL 310 (430)
T ss_dssp SCEEEEEECSSCTTEEEEEETTSEEEEEETTCSCSSSCSEEEECCSSCEE-EEEECSSCTTEEEEEETTSEEEEEETTCT
T ss_pred CCEeeeEEeCCCCCEEEEEeCCCeEEEEECCCCCCCcceeEeecCCCCeE-EEEeCCCCCCEEEEEeCCCeEEEEeCCCC
Confidence 456789999744 456678889999999987652 233333445567 999999885 66655555655555 23
Q ss_pred C--eEEecCCCCCcccEEEccCC-cEEEEeCCCccCCcccccccccccCCceEEEEeCCC---------------CeEEE
Q 018705 123 G--VEAIVPDASFTNDVIAASDG-TLYFTVASTKYTPTDFYKDMAEGKPYGQLRKYDPKL---------------KETTV 184 (351)
Q Consensus 123 g--~~~l~~~~~~~n~l~~d~dG-~ly~t~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~---------------~~~~~ 184 (351)
+ +..+......+.+++++|+| .++++.+. +|.|..||... ..+..
T Consensus 311 ~~~~~~~~~h~~~v~~i~~sp~~~~~l~s~~~-----------------d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~ 373 (430)
T 2xyi_A 311 KLKLHSFESHKDEIFQVQWSPHNETILASSGT-----------------DRRLHVWDLSKIGEEQSTEDAEDGPPELLFI 373 (430)
T ss_dssp TSCSEEEECCSSCEEEEEECSSCTTEEEEEET-----------------TSCCEEEEGGGTTCCCCHHHHHHCCTTEEEE
T ss_pred CCCeEEeecCCCCEEEEEECCCCCCEEEEEeC-----------------CCcEEEEeCCCCccccCccccccCCcceEEE
Confidence 2 55554444678899999998 57777654 35677776543 11222
Q ss_pred eecCccccceEEEcCCCC-EEEEEecce--eEE
Q 018705 185 LHEGFYFANGIALSKNED-FVVVCESWK--RYW 214 (351)
Q Consensus 185 ~~~~~~~~ngi~~~~dg~-~lyv~~~~~--~~~ 214 (351)
.......+..++++|++. .+..+..++ ++|
T Consensus 374 ~~~h~~~v~~~~~~p~~~~~l~s~s~dg~i~iw 406 (430)
T 2xyi_A 374 HGGHTAKISDFSWNPNEPWIICSVSEDNIMQVW 406 (430)
T ss_dssp CCCCSSCEEEEEECSSSTTEEEEEETTSEEEEE
T ss_pred cCCCCCCceEEEECCCCCCEEEEEECCCCEEEe
Confidence 222234578899999998 454455455 555
No 274
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=97.91 E-value=0.0019 Score=57.99 Aligned_cols=137 Identities=14% Similarity=0.064 Sum_probs=80.0
Q ss_pred ecCCCcCCCceEEEeeCCCeEEEEEcCCEEEEEEcCCCeE---EEEeecCCccccceEEcC--CCCEEEEeCCCCeEEEc
Q 018705 46 LGEGCVNHPEDVSVVVSKGALYTATRDGWVKYFILHNETL---VNWKHIDSQSLLGLTTTK--DGGVILCDNEKGLLKVT 120 (351)
Q Consensus 46 i~~~~~~~pe~i~~d~~~g~lyv~~~~g~I~~~d~~~g~~---~~~~~~~~~p~~gl~~d~--~G~L~v~d~~~gl~~~~ 120 (351)
+..+.-..-.++++++++..|.++..|+.|..||..+++. ..+........ .+++.+ +|+++++-...+.++++
T Consensus 8 ~~~~H~~~V~~v~~s~~g~~lasgs~D~~v~lwd~~~~~~~~~~~l~gH~~~V~-~v~~~~~~~~~~l~s~s~D~~v~iW 86 (316)
T 3bg1_A 8 VDTSHEDMIHDAQMDYYGTRLATCSSDRSVKIFDVRNGGQILIADLRGHEGPVW-QVAWAHPMYGNILASCSYDRKVIIW 86 (316)
T ss_dssp ------CCEEEEEECGGGCEEEEEETTTEEEEEEEETTEEEEEEEEECCSSCEE-EEEECCGGGSSCEEEEETTSCEEEE
T ss_pred ecccccCeEEEeeEcCCCCEEEEEeCCCeEEEEEecCCCcEEEEEEcCCCccEE-EEEeCCCCCCCEEEEEECCCEEEEE
Confidence 3333333345889998778889999999999999866643 23333334556 888864 47665555455666666
Q ss_pred C--CC-e---EEecCCCCCcccEEEccC--CcEEEEeCCCccCCcccccccccccCCceEEEEeCCCC-eEEEee---cC
Q 018705 121 E--EG-V---EAIVPDASFTNDVIAASD--GTLYFTVASTKYTPTDFYKDMAEGKPYGQLRKYDPKLK-ETTVLH---EG 188 (351)
Q Consensus 121 ~--~g-~---~~l~~~~~~~n~l~~d~d--G~ly~t~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~~-~~~~~~---~~ 188 (351)
. ++ . ..+......+++++++|+ |.+.++.+. ++.+..||..++ +..... ..
T Consensus 87 d~~~~~~~~~~~~~~h~~~V~~v~~~p~~~g~~lasgs~-----------------D~~i~lwd~~~~~~~~~~~~~~~h 149 (316)
T 3bg1_A 87 REENGTWEKSHEHAGHDSSVNSVCWAPHDYGLILACGSS-----------------DGAISLLTYTGEGQWEVKKINNAH 149 (316)
T ss_dssp CCSSSCCCEEEEECCCSSCCCEEEECCTTTCSCEEEECS-----------------SSCEEEEEECSSSCEEECCBTTSS
T ss_pred ECCCCcceEEEEccCCCCceEEEEECCCCCCcEEEEEcC-----------------CCCEEEEecCCCCCcceeeeeccc
Confidence 2 44 2 223333367899999997 666666543 456777765543 222111 11
Q ss_pred ccccceEEEcCC
Q 018705 189 FYFANGIALSKN 200 (351)
Q Consensus 189 ~~~~ngi~~~~d 200 (351)
....+.++++|+
T Consensus 150 ~~~v~~~~~~~~ 161 (316)
T 3bg1_A 150 TIGCNAVSWAPA 161 (316)
T ss_dssp SSCBCCCEECCC
T ss_pred cCCcceEEEccc
Confidence 123456777776
No 275
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=97.87 E-value=0.00083 Score=60.57 Aligned_cols=68 Identities=15% Similarity=0.090 Sum_probs=49.4
Q ss_pred CCCceEEEeeCCCeEEEEEcCCEEEEEEcCCCeEEEEeecCCccccceEE--cCCCCEEEEeCCCCeEEEc
Q 018705 52 NHPEDVSVVVSKGALYTATRDGWVKYFILHNETLVNWKHIDSQSLLGLTT--TKDGGVILCDNEKGLLKVT 120 (351)
Q Consensus 52 ~~pe~i~~d~~~g~lyv~~~~g~I~~~d~~~g~~~~~~~~~~~p~~gl~~--d~~G~L~v~d~~~gl~~~~ 120 (351)
....++++++++..++++..+|.|..||..+++............ .+++ +++++++++....+.+++.
T Consensus 87 ~~v~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~v~-~~~~~~~~~~~~l~~~~~dg~i~vw 156 (368)
T 3mmy_A 87 GPVLDVCWSDDGSKVFTASCDKTAKMWDLSSNQAIQIAQHDAPVK-TIHWIKAPNYSCVMTGSWDKTLKFW 156 (368)
T ss_dssp SCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECSSCEE-EEEEEECSSCEEEEEEETTSEEEEE
T ss_pred CCEEEEEECcCCCEEEEEcCCCcEEEEEcCCCCceeeccccCceE-EEEEEeCCCCCEEEEccCCCcEEEE
Confidence 345688999777788999999999999998887765554455566 8888 8888755554444544444
No 276
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=97.86 E-value=0.0014 Score=59.76 Aligned_cols=176 Identities=16% Similarity=0.188 Sum_probs=102.0
Q ss_pred eCCCCeEEEcCCC--eEEecCCCCCcccEEEccC----C----cEEEEeCCCccCCcccccccccccCCce--EEEEeCC
Q 018705 111 DNEKGLLKVTEEG--VEAIVPDASFTNDVIAASD----G----TLYFTVASTKYTPTDFYKDMAEGKPYGQ--LRKYDPK 178 (351)
Q Consensus 111 d~~~gl~~~~~~g--~~~l~~~~~~~n~l~~d~d----G----~ly~t~~~~~~~~~~~~~~~~~~~~~g~--l~~~d~~ 178 (351)
+...|++.++.+| ++.+.. ..+|.+.+-++ | .+|+++.. ...++ ++.+||+
T Consensus 47 ~k~~gL~Vydl~G~~l~~~~~--g~~nnVD~r~~~~l~g~~~dla~as~R~---------------~~~n~l~vf~iDp~ 109 (355)
T 3amr_A 47 NKKSGLVVYSLDGKMLHSYNT--GKLNNVDIRYDFPLNGKKVDIAAASNRS---------------EGKNTIEIYAIDGK 109 (355)
T ss_dssp ETTTEEEEEETTSCEEEEECC--SCEEEEEEEEEEEETTEEEEEEEEEECS---------------TTCCEEEEEEECTT
T ss_pred cCCCCEEEEcCCCcEEEEccC--CCcccEEEecccccCCceEeEEEEeCCC---------------CCCCeEEEEEECCC
Confidence 3344677777666 444433 45677766552 1 23555532 00234 4555888
Q ss_pred CCeEEEee-------cCccccceEEE--cCC-CC-EEEEEecce---eEEeecCCCCc--eeEEec-cCCCCCCceEECC
Q 018705 179 LKETTVLH-------EGFYFANGIAL--SKN-ED-FVVVCESWK---RYWLKGDRAGI--LDAFIE-NLPGGPDNINLAP 241 (351)
Q Consensus 179 ~~~~~~~~-------~~~~~~ngi~~--~~d-g~-~lyv~~~~~---~~~i~~~~~~~--~~~~~~-~~~g~pd~i~~d~ 241 (351)
+++++.+. ..+..|.|+|+ ++. ++ ++|+++..+ .|.+.....+. .+.... .+++.|-++..|+
T Consensus 110 ~~~l~~i~~~~~pv~t~~~~pyGlcly~~~~~g~~yafV~~k~G~~~q~~l~~~~~g~~~~~lVR~f~lgsq~EgcvvDd 189 (355)
T 3amr_A 110 NGTLQSMTDPDHPIATAINEVYGFTLYHSQKTGKYYAMVTGKEGEFEQYELKADKNGYISGKKVRAFKMNSQTEGMAADD 189 (355)
T ss_dssp TCCEEECSCTTSCEECCCSSCCCEEEEECTTTCCEEEEEECSSSEEEEEEEEECTTSCEEEEEEEEEECSSCEEEEEEET
T ss_pred CCceeeccccccCcCCCCCCeeEEEEEecCCCCcEEEEEECCCCeEEEEEEEeCCCCcccceEEEEecCCCCcceEEEcC
Confidence 88877662 33478999999 774 43 577776655 45554322221 121111 3556788899986
Q ss_pred -CCCEEEEEecCCchhhhhhhcChhHHHHHHhccchhhcccCCCCCCceEEEEEECC-C----CeEEEEEECCCCCcccc
Q 018705 242 -DGSFWIGLIKMNQTGVRAIQKCREKWELLDAYPGLISLLLPMGSDAGARVVKVDGN-D----GKIIRDFNDPDATYISF 315 (351)
Q Consensus 242 -~G~lwva~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~-~----g~~~~~~~~~~g~~~~~ 315 (351)
.|.||++... .+|.+|+.+ + ++++..+.. +.....
T Consensus 190 ~~g~Lyv~eEd-------------------------------------~GIw~~da~p~~~~~~~~v~~~~~--g~l~aD 230 (355)
T 3amr_A 190 EYGRLYIAEED-------------------------------------EAIWKFSAEPDGGSNGTVIDRADG--RHLTRD 230 (355)
T ss_dssp TTTEEEEEETT-------------------------------------TEEEEEECSTTSCSCCEEEEEBSS--SSBCSC
T ss_pred CCCeEEEeccc-------------------------------------ceEEEEeCCcCCCCCceEEEEecC--CccccC
Confidence 4789999643 258999841 2 455544422 221223
Q ss_pred eeEEEE--EC---CEEEEEecCCCeEEEEeCC
Q 018705 316 VTSAAE--FD---GNLYLASLQSNFIGILPLD 342 (351)
Q Consensus 316 ~~~~~~--~~---g~L~ig~~~~~~i~~~~~~ 342 (351)
+..+.. .. |+|++++=.++.+.+|+..
T Consensus 231 vEGLai~~~~~g~gyLivSsQG~~s~~Vydr~ 262 (355)
T 3amr_A 231 IEGLTIYYAADGKGYLMASSQGNSSYAIYDRQ 262 (355)
T ss_dssp EEEEEEEECGGGCEEEEEEEGGGTEEEEEESS
T ss_pred cceEEEEecCCCCEEEEEEcCCCCEEEEEECC
Confidence 555543 22 5788888777889999875
No 277
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=97.86 E-value=0.0075 Score=53.36 Aligned_cols=179 Identities=13% Similarity=0.080 Sum_probs=98.7
Q ss_pred CceEEEeeC--CCeEEEEEcCCEEEEEEcCCCeE---EEEeecCCccccceEEcCC--CCEEEEeCCCCeEEEc--CCC-
Q 018705 54 PEDVSVVVS--KGALYTATRDGWVKYFILHNETL---VNWKHIDSQSLLGLTTTKD--GGVILCDNEKGLLKVT--EEG- 123 (351)
Q Consensus 54 pe~i~~d~~--~g~lyv~~~~g~I~~~d~~~g~~---~~~~~~~~~p~~gl~~d~~--G~L~v~d~~~gl~~~~--~~g- 123 (351)
-.++++.+. +..|.++..||.|..||..+++. ..+........ .+++.++ |.++++....+.+++. .++
T Consensus 56 V~~v~~s~~~~g~~l~s~s~D~~v~iWd~~~~~~~~~~~~~~h~~~v~-~v~~~p~~~g~~l~s~s~d~~v~~wd~~~~~ 134 (297)
T 2pm7_B 56 VWRVDWAHPKFGTILASCSYDGKVMIWKEENGRWSQIAVHAVHSASVN-SVQWAPHEYGPMLLVASSDGKVSVVEFKENG 134 (297)
T ss_dssp EEEEEECCGGGCSEEEEEETTTEEEEEEBSSSCBCCCEEECCCSSCEE-EEEECCGGGCSEEEEEETTSEEEEEEBCSSS
T ss_pred eEEEEecCCCcCCEEEEEcCCCEEEEEEcCCCceEEEEEeecCCCcee-EEEeCcCCCCcEEEEEECCCcEEEEEecCCC
Confidence 357788643 56788899999999999877643 22222233455 8889876 7666655555655554 222
Q ss_pred ---eEEecCCCCCcccEEEccCC-------------cEEEEeCCCccCCcccccccccccCCceEEEEeCCCCe----E-
Q 018705 124 ---VEAIVPDASFTNDVIAASDG-------------TLYFTVASTKYTPTDFYKDMAEGKPYGQLRKYDPKLKE----T- 182 (351)
Q Consensus 124 ---~~~l~~~~~~~n~l~~d~dG-------------~ly~t~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~~~----~- 182 (351)
...+......++.++++|++ +++++.+. ++.|..||..+++ .
T Consensus 135 ~~~~~~~~~h~~~v~~~~~~p~~~~~~~~~~~~~~~~~l~sgs~-----------------D~~v~lwd~~~~~~~~~~~ 197 (297)
T 2pm7_B 135 TTSPIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGA-----------------DNLVKIWKYNSDAQTYVLE 197 (297)
T ss_dssp CBCCEEEECCSSCEEEEEECCCC------------CCEEEEEET-----------------TSCEEEEEEETTTTEEEEE
T ss_pred ceeeeeeecccCccceEeecCCcccccccCCCCCCcceEEEEcC-----------------CCcEEEEEEcCCCceEEEE
Confidence 22232223567778888763 34444332 4567666654432 1
Q ss_pred EEeecCccccceEEEcCCC---CEEEEEecce--eEEeecCCCCce--eEEe-ccCCCCCCceEECCCCCEEEEEe
Q 018705 183 TVLHEGFYFANGIALSKNE---DFVVVCESWK--RYWLKGDRAGIL--DAFI-ENLPGGPDNINLAPDGSFWIGLI 250 (351)
Q Consensus 183 ~~~~~~~~~~ngi~~~~dg---~~lyv~~~~~--~~~i~~~~~~~~--~~~~-~~~~g~pd~i~~d~~G~lwva~~ 250 (351)
..+...-...+.++++|++ +.|..+..++ ++|-.....+.. ..+. ...++....++++++|++.++..
T Consensus 198 ~~l~~H~~~V~~v~~sp~~~~~~~las~s~D~~v~iWd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~las~~ 273 (297)
T 2pm7_B 198 STLEGHSDWVRDVAWSPTVLLRSYMASVSQDRTCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSG 273 (297)
T ss_dssp EEECCCSSCEEEEEECCCCSSSEEEEEEETTSCEEEEEESSTTSCCEEEESSSSCCSSCEEEEEECSSSCCEEEEE
T ss_pred EEecCCCCceEEEEECCCCCCceEEEEEECCCcEEEEEeCCCCCccceeeeecccCCCcEEEEEECCCCCEEEEEc
Confidence 1222223456789999985 4444444455 666432211111 1111 11222233467889998766654
No 278
>3b7f_A Glycosyl hydrolase, BNR repeat; 7-bladed beta-propeller fold, structural genomics, joint CEN structural genomics, JCSG; 2.20A {Ralstonia eutropha}
Probab=97.84 E-value=0.00076 Score=62.81 Aligned_cols=178 Identities=13% Similarity=0.117 Sum_probs=103.1
Q ss_pred CCceEEEee-CCCeEEEEEcCC----EEEEEEcCCCeEEEEeecC--------------CccccceEEcC---CCCEEEE
Q 018705 53 HPEDVSVVV-SKGALYTATRDG----WVKYFILHNETLVNWKHID--------------SQSLLGLTTTK---DGGVILC 110 (351)
Q Consensus 53 ~pe~i~~d~-~~g~lyv~~~~g----~I~~~d~~~g~~~~~~~~~--------------~~p~~gl~~d~---~G~L~v~ 110 (351)
...+|++|| +.+.+|++...| .|++.+.....++.+.... .+.. .|++++ .++||++
T Consensus 56 ~v~~i~~dp~~~~~l~~g~~~g~~g~gl~~s~D~G~tW~~~~~~~~~~~~~~~~~~~~~~~i~-~l~~~~~~~~~~l~~g 134 (394)
T 3b7f_A 56 TIHHIVQDPREPERMLMAARTGHLGPTVFRSDDGGGNWTEATRPPAFNKAPEGETGRVVDHVF-WLTPGHASEPGTWYAG 134 (394)
T ss_dssp EEEEEEECSSSTTCEEEEEEC--CCEEEEEESSTTSCCEECSBCCCCCCCC----CCCCCEEE-EEEECCTTSTTCEEEE
T ss_pred ceEEEEECCCCCCeEEEEecCCCCCccEEEeCCCCCCceECCccccCCCccccccccccccee-EEEeCCCCCCCEEEEE
Confidence 456899996 368899998877 7988764333455443210 1233 578885 6799998
Q ss_pred eCCCCeEEEcCCC--eEEecCC-------------------CCCcccEEEcc--CCcEEEEeCCCccCCccccccccccc
Q 018705 111 DNEKGLLKVTEEG--VEAIVPD-------------------ASFTNDVIAAS--DGTLYFTVASTKYTPTDFYKDMAEGK 167 (351)
Q Consensus 111 d~~~gl~~~~~~g--~~~l~~~-------------------~~~~n~l~~d~--dG~ly~t~~~~~~~~~~~~~~~~~~~ 167 (351)
....++++.+..| .+.+... ...+.+|++++ .+++|+....
T Consensus 135 ~~~ggl~~S~DgG~tW~~~~~~~~~p~~~~~~~~~~~g~~~~~~i~~i~~d~~~~~~l~vg~~~---------------- 198 (394)
T 3b7f_A 135 TSPQGLFRSTDHGASWEPVAGFNDHPMRRAWTGGEQDGTPDGPKMHSILVDPRDPKHLYIGMSS---------------- 198 (394)
T ss_dssp EETTEEEEESSTTSBCEECHHHHTCTTHHHHHCCC----CCCCEEEEEEECTTCTTCEEEEEET----------------
T ss_pred ecCCcEEEEcCCCCCeEECcCccCCccccccccccccCCCCCCceeEEEECCCCCCEEEEEECC----------------
Confidence 7777888887655 4444210 01245788887 3579987642
Q ss_pred CCceEEEEeCCCCeEEEeecCc-------------cccceEEEcCC-CCEEEEEecceeEEeecCCCCceeEEeccCCC-
Q 018705 168 PYGQLRKYDPKLKETTVLHEGF-------------YFANGIALSKN-EDFVVVCESWKRYWLKGDRAGILDAFIENLPG- 232 (351)
Q Consensus 168 ~~g~l~~~d~~~~~~~~~~~~~-------------~~~ngi~~~~d-g~~lyv~~~~~~~~i~~~~~~~~~~~~~~~~g- 232 (351)
++|++.+..+...+.+.... .....|+++++ .+.+|++.....|...+. ..+.+.+...++.
T Consensus 199 --ggl~~s~DgG~tW~~~~~~~~~~~~p~~~~~~g~~~~~i~~~~~~~~~l~vg~~~gl~~s~D~-G~tW~~~~~~l~~~ 275 (394)
T 3b7f_A 199 --GGVFESTDAGTDWKPLNRGCAANFLPDPNVEFGHDPHCVVQHPAAPDILYQQNHCGIYRMDRR-EGVWKRIGDAMPRE 275 (394)
T ss_dssp --BEEEEESSTTSSCEECCTTCCCTTSSSSSSSSCBCEEEEEECSSSTTEEEEEETTEEEEEETT-TTEEECGGGGSCTT
T ss_pred --CCEEEECCCCCCceECCCCccccccCCCccccCcceeEEEECCCCCCEEEEEcCCeEEEeCCC-CCcceECCCCCCCC
Confidence 46777765544454443221 12456888875 356999875554443332 1222222222221
Q ss_pred ---CCCceEEC--CCCCEEEEEe
Q 018705 233 ---GPDNINLA--PDGSFWIGLI 250 (351)
Q Consensus 233 ---~pd~i~~d--~~G~lwva~~ 250 (351)
+...+++| ..+.+|+++.
T Consensus 276 ~~~~~~~i~~~p~~~~~l~~~t~ 298 (394)
T 3b7f_A 276 VGDIGFPIVVHQRDPRTVWVFPM 298 (394)
T ss_dssp TCSCEEEEEECSSCTTCEEEEEC
T ss_pred CccceEEEEECCCCCCEEEEEec
Confidence 11235666 4578999864
No 279
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=97.83 E-value=0.015 Score=52.65 Aligned_cols=175 Identities=13% Similarity=0.073 Sum_probs=93.3
Q ss_pred CCceEEEeeCCCeEEEEEcCCEEEEEEcCCC-eEEEEeecC---C-ccccceEEcCCCCEEEEeCCCCeEEEcCCC--eE
Q 018705 53 HPEDVSVVVSKGALYTATRDGWVKYFILHNE-TLVNWKHID---S-QSLLGLTTTKDGGVILCDNEKGLLKVTEEG--VE 125 (351)
Q Consensus 53 ~pe~i~~d~~~g~lyv~~~~g~I~~~d~~~g-~~~~~~~~~---~-~p~~gl~~d~~G~L~v~d~~~gl~~~~~~g--~~ 125 (351)
...+|++. +.+.+|+....|.|++-. +.| .++...... . ... ++++++ +++|++.....+++-...| .+
T Consensus 37 ~~~~v~~~-~~~~~~~~G~~g~i~~s~-DgG~tW~~~~~~~~~~~~~~~-~i~~~~-~~~~~~g~~g~i~~S~DgG~tW~ 112 (327)
T 2xbg_A 37 TILDMSFI-DRHHGWLVGVNATLMETR-DGGQTWEPRTLVLDHSDYRFN-SVSFQG-NEGWIVGEPPIMLHTTDGGQSWS 112 (327)
T ss_dssp CEEEEEES-SSSCEEEEETTTEEEEES-STTSSCEECCCCCSCCCCEEE-EEEEET-TEEEEEEETTEEEEESSTTSSCE
T ss_pred cEEEEEEC-CCCcEEEEcCCCeEEEeC-CCCCCCeECCCCCCCCCccEE-EEEecC-CeEEEEECCCeEEEECCCCCCce
Confidence 44577776 566777766778777653 234 344432211 2 234 788875 7888876444455533334 44
Q ss_pred EecCC--C-CCcccEEEccCCcEEEEeCCCccCCcccccccccccCCceEEEEeCCCCeEEEeecCc-cccceEEEcCCC
Q 018705 126 AIVPD--A-SFTNDVIAASDGTLYFTVASTKYTPTDFYKDMAEGKPYGQLRKYDPKLKETTVLHEGF-YFANGIALSKNE 201 (351)
Q Consensus 126 ~l~~~--~-~~~n~l~~d~dG~ly~t~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~~~~~~~~~~~-~~~ngi~~~~dg 201 (351)
.+... . ..+++|++.+++++|+.... |.|++-.-.....+.+.... ....++++++++
T Consensus 113 ~~~~~~~~~~~~~~i~~~~~~~~~~~~~~------------------g~v~~S~DgG~tW~~~~~~~~~~~~~~~~~~~~ 174 (327)
T 2xbg_A 113 QIPLDPKLPGSPRLIKALGNGSAEMITNV------------------GAIYRTKDSGKNWQALVQEAIGVMRNLNRSPSG 174 (327)
T ss_dssp ECCCCTTCSSCEEEEEEEETTEEEEEETT------------------CCEEEESSTTSSEEEEECSCCCCEEEEEECTTS
T ss_pred ECccccCCCCCeEEEEEECCCCEEEEeCC------------------ccEEEEcCCCCCCEEeecCCCcceEEEEEcCCC
Confidence 44322 1 34567777777888876532 45666543333444443221 234568888888
Q ss_pred CEEEEEecce-eEEeecCCCCceeEEeccCCCCCCceEECCCCCEEEEEe
Q 018705 202 DFVVVCESWK-RYWLKGDRAGILDAFIENLPGGPDNINLAPDGSFWIGLI 250 (351)
Q Consensus 202 ~~lyv~~~~~-~~~i~~~~~~~~~~~~~~~~g~pd~i~~d~~G~lwva~~ 250 (351)
. +|+....+ .|...+......+......+.....+.++++|++|++..
T Consensus 175 ~-~~~~g~~G~~~~S~d~gG~tW~~~~~~~~~~~~~~~~~~~g~~~~~~~ 223 (327)
T 2xbg_A 175 E-YVAVSSRGSFYSTWEPGQTAWEPHNRTTSRRLHNMGFTPDGRLWMIVN 223 (327)
T ss_dssp C-EEEEETTSSEEEEECTTCSSCEEEECCSSSCEEEEEECTTSCEEEEET
T ss_pred c-EEEEECCCcEEEEeCCCCCceeECCCCCCCccceeEECCCCCEEEEeC
Confidence 7 55444333 333332111222222211122234567788899998754
No 280
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=97.82 E-value=0.0036 Score=56.10 Aligned_cols=192 Identities=13% Similarity=0.065 Sum_probs=99.3
Q ss_pred CceEEEeeC--CCeEEEEEcCCEEEEEEcCCCeE---EEEeecCCccccceEEcCC--CCEEEEeCCCCeEEEcC--CC-
Q 018705 54 PEDVSVVVS--KGALYTATRDGWVKYFILHNETL---VNWKHIDSQSLLGLTTTKD--GGVILCDNEKGLLKVTE--EG- 123 (351)
Q Consensus 54 pe~i~~d~~--~g~lyv~~~~g~I~~~d~~~g~~---~~~~~~~~~p~~gl~~d~~--G~L~v~d~~~gl~~~~~--~g- 123 (351)
-.++++.+. +..|.++..|+.|..||..+++. ..+........ .+++.++ |.++++....+.+++.. .+
T Consensus 60 V~~v~~~~~~~~~~l~s~s~D~~v~iWd~~~~~~~~~~~~~~h~~~V~-~v~~~p~~~g~~lasgs~D~~i~lwd~~~~~ 138 (316)
T 3bg1_A 60 VWQVAWAHPMYGNILASCSYDRKVIIWREENGTWEKSHEHAGHDSSVN-SVCWAPHDYGLILACGSSDGAISLLTYTGEG 138 (316)
T ss_dssp EEEEEECCGGGSSCEEEEETTSCEEEECCSSSCCCEEEEECCCSSCCC-EEEECCTTTCSCEEEECSSSCEEEEEECSSS
T ss_pred EEEEEeCCCCCCCEEEEEECCCEEEEEECCCCcceEEEEccCCCCceE-EEEECCCCCCcEEEEEcCCCCEEEEecCCCC
Confidence 457888642 56788899999999999877643 22222334456 8999886 76666655566666652 22
Q ss_pred -eEEec---CCCCCcccEEEccCC---cEEEEeCCCccCCcccccccccccCCceEEEEeCCCC-eEEE---eecCcccc
Q 018705 124 -VEAIV---PDASFTNDVIAASDG---TLYFTVASTKYTPTDFYKDMAEGKPYGQLRKYDPKLK-ETTV---LHEGFYFA 192 (351)
Q Consensus 124 -~~~l~---~~~~~~n~l~~d~dG---~ly~t~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~~-~~~~---~~~~~~~~ 192 (351)
..... .....++.++++|++ .+...... .. ......+..+..++.|..||..++ +.+. +...-...
T Consensus 139 ~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~-~~--~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~l~~h~~~V 215 (316)
T 3bg1_A 139 QWEVKKINNAHTIGCNAVSWAPAVVPGSLIDHPSG-QK--PNYIKRFASGGCDNLIKLWKEEEDGQWKEEQKLEAHSDWV 215 (316)
T ss_dssp CEEECCBTTSSSSCBCCCEECCCCCC------CCS-CC--CCCCCBEECCBTTSBCCEEEECTTSCEEEEECCBCCSSCE
T ss_pred CcceeeeeccccCCcceEEEccccCCccccccccc-cC--ccccceEEEecCCCeEEEEEeCCCCccceeeecccCCCce
Confidence 22211 112456777887763 11100000 00 000011222333566666665432 2221 22222346
Q ss_pred ceEEEcCCC----CEEEEEecce--eEEeecC-CCCc--eeEEeccCCCCCCceEECCCCCEEEEEe
Q 018705 193 NGIALSKNE----DFVVVCESWK--RYWLKGD-RAGI--LDAFIENLPGGPDNINLAPDGSFWIGLI 250 (351)
Q Consensus 193 ngi~~~~dg----~~lyv~~~~~--~~~i~~~-~~~~--~~~~~~~~~g~pd~i~~d~~G~lwva~~ 250 (351)
+.++++|++ +.|..+..++ ++|-... ..+. ...+. ...+....++++++|++.++..
T Consensus 216 ~~v~~sp~~~~~~~~las~s~D~~v~iw~~~~~~~~~~~~~~~~-~~~~~v~~v~~sp~g~~las~~ 281 (316)
T 3bg1_A 216 RDVAWAPSIGLPTSTIASCSQDGRVFIWTCDDASSNTWSPKLLH-KFNDVVWHVSWSITANILAVSG 281 (316)
T ss_dssp EEEECCCCSSCSCCEEEEEETTCEEEEEECSSTTCCCCBCCEEE-ECSSCEEEEEECTTTCCEEEEE
T ss_pred EEEEecCCCCCCCceEEEEcCCCeEEEEEccCccccchhhhhhh-cCCCcEEEEEEcCCCCEEEEEc
Confidence 789999986 5555555555 6663221 1111 11222 1222334578889998666554
No 281
>3zwu_A Alkaline phosphatase PHOX; hydrolase, beta-propeller, iron; 1.39A {Pseudomonas fluorescens}
Probab=97.81 E-value=8.4e-05 Score=72.87 Aligned_cols=71 Identities=17% Similarity=0.150 Sum_probs=51.8
Q ss_pred CCcccEEEccCCcEEEEeCCCccCCcccccccccccCCceEEEEeCCCCeEEEeecC--ccccceEEEcCCCCEEEEE
Q 018705 132 SFTNDVIAASDGTLYFTVASTKYTPTDFYKDMAEGKPYGQLRKYDPKLKETTVLHEG--FYFANGIALSKNEDFVVVC 207 (351)
Q Consensus 132 ~~~n~l~~d~dG~ly~t~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~~~~~~~~~~--~~~~ngi~~~~dg~~lyv~ 207 (351)
..|..|++|++|+|||++.+..-.. ..+....++.++.+++.+++++.+... .....|++|+||+++||++
T Consensus 476 ~~PDNL~fd~~G~LwI~eDg~~~~~-----~~~~~~gnn~~~~~~~~~g~~~rf~~~P~gaE~TG~~fspDg~tlfvn 548 (592)
T 3zwu_A 476 NSPDGLGFDKAGRLWILTDGDSSNA-----GDFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGISFSPDQKTLFVG 548 (592)
T ss_dssp CCEEEEEECTTCCEEEEECCCCCCS-----GGGTTTCSCEEEEECTTTCCEEEEEECCTTCEEEEEEECTTSSEEEEE
T ss_pred cCCcceEECCCCCEEEEecCCCccc-----ccccccccceEEEEeCCCCeEEEEEeCCCCccCcCeeECCCCCEEEEE
Confidence 6899999999999999876421111 111122345789999999998887644 3456799999999988886
No 282
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=97.80 E-value=0.0016 Score=63.54 Aligned_cols=141 Identities=11% Similarity=0.091 Sum_probs=95.5
Q ss_pred CceEEEeeCCCeEEEEEcCCEEEEEEcCCCe--------EEEEee----cCCccccceEEcCCCCEEEEeCCCCeEEEcC
Q 018705 54 PEDVSVVVSKGALYTATRDGWVKYFILHNET--------LVNWKH----IDSQSLLGLTTTKDGGVILCDNEKGLLKVTE 121 (351)
Q Consensus 54 pe~i~~d~~~g~lyv~~~~g~I~~~d~~~g~--------~~~~~~----~~~~p~~gl~~d~~G~L~v~d~~~gl~~~~~ 121 (351)
-.+++|+|++..|+++..||.|..|+.++++ +..+.. ...... .+++.++| +..+...+.+...+.
T Consensus 132 v~svafSPDG~~LAsgs~DGtVkIWd~~~~~l~~~~~i~l~ti~~~~~gh~~~V~-sVawSPdg-Laass~D~tVrlWd~ 209 (588)
T 2j04_A 132 YHCFEWNPIESSIVVGNEDGELQFFSIRKNSENTPEFYFESSIRLSDAGSKDWVT-HIVWYEDV-LVAALSNNSVFSMTV 209 (588)
T ss_dssp EEEEEECSSSSCEEEEETTSEEEEEECCCCTTTCCCCEEEEEEECSCTTCCCCEE-EEEEETTE-EEEEETTCCEEEECC
T ss_pred EEEEEEcCCCCEEEEEcCCCEEEEEECCCCccccccceeeeeeecccccccccEE-EEEEcCCc-EEEEeCCCeEEEEEC
Confidence 5689999999999999999999999987774 233321 123566 89999999 666655544444444
Q ss_pred CC--e----EEec-CCCCCcccEEEccCCcEEEEeCCCccCCcccccccccccCCceEEEEeCCCCeEEEee-cCccccc
Q 018705 122 EG--V----EAIV-PDASFTNDVIAASDGTLYFTVASTKYTPTDFYKDMAEGKPYGQLRKYDPKLKETTVLH-EGFYFAN 193 (351)
Q Consensus 122 ~g--~----~~l~-~~~~~~n~l~~d~dG~ly~t~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~~~~~~~~-~~~~~~n 193 (351)
++ . +.+. .....+.++++. |+..++.. .+.|..||..+++...+. ......+
T Consensus 210 ~~~~~~~~~~tL~~~h~~~V~svaFs--g~~LASa~------------------~~tIkLWd~~~~~~~~~~~gh~~~V~ 269 (588)
T 2j04_A 210 SASSHQPVSRMIQNASRRKITDLKIV--DYKVVLTC------------------PGYVHKIDLKNYSISSLKTGSLENFH 269 (588)
T ss_dssp CSSSSCCCEEEEECCCSSCCCCEEEE--TTEEEEEC------------------SSEEEEEETTTTEEEEEECSCCSCCC
T ss_pred CCCccccceeeecccccCcEEEEEEE--CCEEEEEe------------------CCeEEEEECCCCeEEEEEcCCCceEE
Confidence 33 2 2342 222578899987 45554443 258999998888775544 4445567
Q ss_pred eEEE--cCCCCEEEEEecce-eEEee
Q 018705 194 GIAL--SKNEDFVVVCESWK-RYWLK 216 (351)
Q Consensus 194 gi~~--~~dg~~lyv~~~~~-~~~i~ 216 (351)
+|++ ++|+..+.++..++ ++|..
T Consensus 270 ~va~~~s~d~~~La~a~edG~klw~~ 295 (588)
T 2j04_A 270 IIPLNHEKESTILLMSNKTSYKVLLE 295 (588)
T ss_dssp EEEETTCSSCEEEEECSSCEEEEEES
T ss_pred EEEeeeCCCCCEEEEEcCCCCEEEee
Confidence 8999 99997666666455 56654
No 283
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=97.77 E-value=0.0068 Score=56.71 Aligned_cols=135 Identities=14% Similarity=0.173 Sum_probs=76.6
Q ss_pred ceEEEeeCCCeEEEEEcCCEEEEEEcCCCeEEE-EeecCCccccceEEcCCCCEEEEeCCCCeEEEc-CCC--e---EEe
Q 018705 55 EDVSVVVSKGALYTATRDGWVKYFILHNETLVN-WKHIDSQSLLGLTTTKDGGVILCDNEKGLLKVT-EEG--V---EAI 127 (351)
Q Consensus 55 e~i~~d~~~g~lyv~~~~g~I~~~d~~~g~~~~-~~~~~~~p~~gl~~d~~G~L~v~d~~~gl~~~~-~~g--~---~~l 127 (351)
.++++ +++.++++..||.|..||..+++... +........ .++++ ++.++.+...+.+...+ .++ . ..+
T Consensus 177 ~~l~~--~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~-~l~~~-~~~l~s~s~dg~i~vwd~~~~~~~~~~~~~ 252 (435)
T 1p22_A 177 LCLQY--DERVIITGSSDSTVRVWDVNTGEMLNTLIHHCEAVL-HLRFN-NGMMVTCSKDRSIAVWDMASPTDITLRRVL 252 (435)
T ss_dssp EEEEC--CSSEEEEEETTSCEEEEESSSCCEEEEECCCCSCEE-EEECC-TTEEEEEETTSCEEEEECSSSSCCEEEEEE
T ss_pred EEEEE--CCCEEEEEcCCCeEEEEECCCCcEEEEEcCCCCcEE-EEEEc-CCEEEEeeCCCcEEEEeCCCCCCceeeeEe
Confidence 45555 46788999999999999987776533 322333344 67665 23455555443343334 233 2 233
Q ss_pred cCCCCCcccEEEccCCcEEEEeCCCccCCcccccccccccCCceEEEEeCCCCeEEEeec-CccccceEEEcCCCCEEEE
Q 018705 128 VPDASFTNDVIAASDGTLYFTVASTKYTPTDFYKDMAEGKPYGQLRKYDPKLKETTVLHE-GFYFANGIALSKNEDFVVV 206 (351)
Q Consensus 128 ~~~~~~~n~l~~d~dG~ly~t~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~~~~~~~~~-~~~~~ngi~~~~dg~~lyv 206 (351)
......++.+++ +|...++.+. +|.|..||..+++...... .......+++ +++.++.
T Consensus 253 ~~~~~~v~~~~~--~~~~l~s~~~-----------------dg~i~vwd~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~ 311 (435)
T 1p22_A 253 VGHRAAVNVVDF--DDKYIVSASG-----------------DRTIKVWNTSTCEFVRTLNGHKRGIACLQY--RDRLVVS 311 (435)
T ss_dssp CCCSSCEEEEEE--ETTEEEEEET-----------------TSEEEEEETTTCCEEEEEECCSSCEEEEEE--ETTEEEE
T ss_pred cCCCCcEEEEEe--CCCEEEEEeC-----------------CCeEEEEECCcCcEEEEEcCCCCcEEEEEe--CCCEEEE
Confidence 332245566666 5555554433 4689999988776543332 2233445555 4566777
Q ss_pred Eecce--eEE
Q 018705 207 CESWK--RYW 214 (351)
Q Consensus 207 ~~~~~--~~~ 214 (351)
+..++ ++|
T Consensus 312 g~~dg~i~iw 321 (435)
T 1p22_A 312 GSSDNTIRLW 321 (435)
T ss_dssp EETTSCEEEE
T ss_pred EeCCCeEEEE
Confidence 76666 444
No 284
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=97.77 E-value=0.022 Score=51.85 Aligned_cols=196 Identities=12% Similarity=0.087 Sum_probs=101.6
Q ss_pred CCCceEEEeeCCCeEEEEEcCCEEEEEEcCCCeEEEEeecCCccccceEEcCCCCEE-EEeCCCCeEEEc--CCC--eEE
Q 018705 52 NHPEDVSVVVSKGALYTATRDGWVKYFILHNETLVNWKHIDSQSLLGLTTTKDGGVI-LCDNEKGLLKVT--EEG--VEA 126 (351)
Q Consensus 52 ~~pe~i~~d~~~g~lyv~~~~g~I~~~d~~~g~~~~~~~~~~~p~~gl~~d~~G~L~-v~d~~~gl~~~~--~~g--~~~ 126 (351)
..-.++++++++..+.++..+ ++..|+..+++....... .... .+.+..++++. ++....+.++++ .++ ...
T Consensus 20 ~~V~~v~fs~dg~~la~g~~~-~~~iw~~~~~~~~~~~~~-~~~~-~~~~~~~~~~~~~~~~~d~~v~iWd~~~~~~~~~ 96 (355)
T 3vu4_A 20 NPVTDYEFNQDQSCLILSTLK-SFEIYNVHPVAHIMSQEM-RHLS-KVRMLHRTNYVAFVTGVKEVVHIWDDVKKQDVSR 96 (355)
T ss_dssp CCCCEEEECTTSSEEEEECSS-EEEEEEETTEEEEEEEEC-SCCC-EEEECTTSSEEEEECSSTTEEEEEETTTTEEEEE
T ss_pred CceEEEEECCCCCEEEEEcCC-EEEEEecCCcceeeeeec-CCeE-EEEEcCCCCEEEEEECCccEEEEEECCCCcEEEE
Confidence 345699999766666666655 477888765544322221 1233 45666666544 444444566666 355 333
Q ss_pred ecCCCCCcccEEEcc-------CCcEEEEeCCCc-cCCcccc----------ccc-cc-ccCCceEEEEeCCCCe-----
Q 018705 127 IVPDASFTNDVIAAS-------DGTLYFTVASTK-YTPTDFY----------KDM-AE-GKPYGQLRKYDPKLKE----- 181 (351)
Q Consensus 127 l~~~~~~~n~l~~d~-------dG~ly~t~~~~~-~~~~~~~----------~~~-~~-~~~~g~l~~~d~~~~~----- 181 (351)
+... ..+.++.+++ ++.+++=+.... -...... ..+ .. +...|.|..||..+++
T Consensus 97 ~~~~-~~v~~v~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~~~~s~~~la~~sg~~~g~v~iwd~~~~~~~~~~ 175 (355)
T 3vu4_A 97 IKVD-APVKDLFLSREFIVVSYGDVISVFKFGNPWKRITDDIRFGGVCEFSNGLLVYSNEFNLGQIHITKLQSSGSATTQ 175 (355)
T ss_dssp EECS-SCEEEEEECSSEEEEEETTEEEEEESSTTCCBSSCCEEEEEEEEEETTEEEEEESSCTTCEEEEECCC-------
T ss_pred EECC-CceEEEEEcCCEEEEEEcCEEEEEECCCCceeeEEeccCCceEEEEccEEEEeCCCcCcEEEEEECCCCCccccc
Confidence 3322 2344444444 444443332111 0000000 001 11 4567889999987654
Q ss_pred ------------EEEeecCccccceEEEcCCCCEEEEEeccee-EEeecCCCCc-eeEEecc-CCCCCCceEECCCCCEE
Q 018705 182 ------------TTVLHEGFYFANGIALSKNEDFVVVCESWKR-YWLKGDRAGI-LDAFIEN-LPGGPDNINLAPDGSFW 246 (351)
Q Consensus 182 ------------~~~~~~~~~~~ngi~~~~dg~~lyv~~~~~~-~~i~~~~~~~-~~~~~~~-~~g~pd~i~~d~~G~lw 246 (351)
...+...-.....++++|||+.|..+..++. +.+-+...++ ...+..+ ..+....++++++|++.
T Consensus 176 ~~~~~~~~~~p~~~~~~~h~~~v~~~~~s~~g~~l~s~s~d~~~v~iwd~~~~~~~~~~~~g~h~~~v~~~~~s~~~~~l 255 (355)
T 3vu4_A 176 DQGVQQKAILGKGVLIKAHTNPIKMVRLNRKSDMVATCSQDGTIIRVFKTEDGVLVREFRRGLDRADVVDMKWSTDGSKL 255 (355)
T ss_dssp -----------CCEEECCCSSCEEEEEECTTSSEEEEEETTCSEEEEEETTTCCEEEEEECTTCCSCEEEEEECTTSCEE
T ss_pred cccccccccCcccEEEEccCCceEEEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEEcCCCCCcEEEEEECCCCCEE
Confidence 3333333445678999999997766666553 4443333333 2223211 23334567899999877
Q ss_pred EEEec
Q 018705 247 IGLIK 251 (351)
Q Consensus 247 va~~~ 251 (351)
++...
T Consensus 256 ~s~s~ 260 (355)
T 3vu4_A 256 AVVSD 260 (355)
T ss_dssp EEEET
T ss_pred EEEEC
Confidence 76654
No 285
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=97.74 E-value=0.038 Score=54.14 Aligned_cols=54 Identities=15% Similarity=0.097 Sum_probs=35.8
Q ss_pred CceEEEEEECCCCeEEEEEECCCCCcccceeEEEEECCEEEEEecCCCeEEEEeCCCC
Q 018705 287 AGARVVKVDGNDGKIIRDFNDPDATYISFVTSAAEFDGNLYLASLQSNFIGILPLDGP 344 (351)
Q Consensus 287 ~~~~v~~~~~~~g~~~~~~~~~~g~~~~~~~~~~~~~g~L~ig~~~~~~i~~~~~~~~ 344 (351)
..+.+..+|+++|++.-.+..... . ....+...++.+|+++. .+.+..++.++-
T Consensus 442 ~~g~l~a~D~~tG~~~W~~~~~~~--~-~~~~~~t~gg~v~~g~~-dg~l~a~D~~tG 495 (571)
T 2ad6_A 442 EMGQIRAFDLTTGKAKWTKWEKFA--A-WGGTLYTKGGLVWYATL-DGYLKALDNKDG 495 (571)
T ss_dssp CCEEEEEECTTTCCEEEEEEESSC--C-CSBCEEETTTEEEEECT-TSEEEEEETTTC
T ss_pred CCCeEEEEECCCCCEEEEecCCCC--c-cceeEEECCCEEEEEcC-CCeEEEEECCCC
Confidence 347899999878988777653221 1 11233445789999875 677888886653
No 286
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=97.73 E-value=0.032 Score=55.80 Aligned_cols=54 Identities=7% Similarity=-0.084 Sum_probs=36.5
Q ss_pred ceEEEEEECCCCeEEEEEECCCCCcccceeEEEEECCEEEEEecCCCeEEEEeCCCCC
Q 018705 288 GARVVKVDGNDGKIIRDFNDPDATYISFVTSAAEFDGNLYLASLQSNFIGILPLDGPE 345 (351)
Q Consensus 288 ~~~v~~~~~~~g~~~~~~~~~~g~~~~~~~~~~~~~g~L~ig~~~~~~i~~~~~~~~~ 345 (351)
.+.|..+|+.+|+++-.+.... .. .-..+...++.+|+++. .+.+..+++.+-+
T Consensus 456 ~g~l~A~D~~tG~~~W~~~~~~--~~-~~g~~~~~g~~v~~g~~-dg~l~a~D~~tG~ 509 (677)
T 1kb0_A 456 FGRLLAWDPVAQKAAWSVEHVS--PW-NGGTLTTAGNVVFQGTA-DGRLVAYHAATGE 509 (677)
T ss_dssp EEEEEEEETTTTEEEEEEEESS--SC-CCCEEEETTTEEEEECT-TSEEEEEETTTCC
T ss_pred ccEEEEEeCCCCcEEeecCCCC--CC-cCcceEeCCCEEEEECC-CCcEEEEECCCCc
Confidence 4789999997899877665322 11 11234456788999865 7888888877544
No 287
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=97.73 E-value=0.0002 Score=66.37 Aligned_cols=134 Identities=16% Similarity=0.115 Sum_probs=55.5
Q ss_pred ceEEEeeCCCeEEEEEcCCEEEEEEcCCCeEEEEeecCCccccceEEcCCCCEEEEe-CCCCeEEEcC-CC--eEEecCC
Q 018705 55 EDVSVVVSKGALYTATRDGWVKYFILHNETLVNWKHIDSQSLLGLTTTKDGGVILCD-NEKGLLKVTE-EG--VEAIVPD 130 (351)
Q Consensus 55 e~i~~d~~~g~lyv~~~~g~I~~~d~~~g~~~~~~~~~~~p~~gl~~d~~G~L~v~d-~~~gl~~~~~-~g--~~~l~~~ 130 (351)
.+++++ ++.+|+++.+|.|+.+|.++|+..--... +... ...+-.+|.+|++. ..+.++.++. +| ...+...
T Consensus 3 ssP~v~--~~~v~~gs~dg~v~a~d~~tG~~~W~~~~-~~~~-s~p~~~~g~~~v~~s~dg~l~a~d~~tG~~~w~~~~~ 78 (369)
T 2hz6_A 3 STVTLP--ETLLFVSTLDGSLHAVSKRTGSIKWTLKE-DPVL-QVPTHVEEPAFLPDPNDGSLYTLGSKNNEGLTKLPFT 78 (369)
T ss_dssp -----C--TTEEEEEETTSEEEEEETTTCCEEEEEEC-CCSC-CCC-----CCEEECTTTCCEEEC-----CCSEECSCC
T ss_pred CCCeee--CCEEEEEcCCCEEEEEECCCCCEEEEecC-CCce-ecceEcCCCEEEEeCCCCEEEEEECCCCceeeeeecc
Confidence 455664 79999999999999999989976422222 3333 33333567677763 4456777775 66 3333221
Q ss_pred C-CCc-ccEEEccCCcEEEEeCCCccCCcccccccccccCCceEEEEeCCCCeEEEeecCccccceEEEcCCCCEEEEEe
Q 018705 131 A-SFT-NDVIAASDGTLYFTVASTKYTPTDFYKDMAEGKPYGQLRKYDPKLKETTVLHEGFYFANGIALSKNEDFVVVCE 208 (351)
Q Consensus 131 ~-~~~-n~l~~d~dG~ly~t~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~~~~~~~~~~~~~~ngi~~~~dg~~lyv~~ 208 (351)
. ... ...+++.++.+|+... ++.|+.+|+++|+....... ...+..+|+++.+|++.
T Consensus 79 ~~~~~~~sp~~~~~~~v~~g~~------------------dg~v~a~D~~tG~~~w~~~~---~~~~~~~p~~~~v~~~~ 137 (369)
T 2hz6_A 79 IPELVQASPCRSSDGILYMGKK------------------QDIWYVIDLLTGEKQQTLSS---AFADSLSPSTSLLYLGR 137 (369)
T ss_dssp HHHHHTTCSCC-----CCCCEE------------------EEEEEEECCC-------------------------EEEEE
T ss_pred CccccccCceEecCCEEEEEeC------------------CCEEEEEECCCCcEEEEecC---CCcccccccCCEEEEEe
Confidence 1 000 1112223455655332 46799999988876432211 11234556777788876
Q ss_pred cceeE
Q 018705 209 SWKRY 213 (351)
Q Consensus 209 ~~~~~ 213 (351)
.++.+
T Consensus 138 ~dg~v 142 (369)
T 2hz6_A 138 TEYTI 142 (369)
T ss_dssp EEEEE
T ss_pred cCCEE
Confidence 55533
No 288
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=97.73 E-value=0.0014 Score=66.54 Aligned_cols=179 Identities=13% Similarity=0.096 Sum_probs=104.3
Q ss_pred CCceEEEeeC--CCeEEEEEcCCEEEEEEcCCCeEEE---EeecCCccccceEEcCC--CCEEEEeCCCCeEEEc--CCC
Q 018705 53 HPEDVSVVVS--KGALYTATRDGWVKYFILHNETLVN---WKHIDSQSLLGLTTTKD--GGVILCDNEKGLLKVT--EEG 123 (351)
Q Consensus 53 ~pe~i~~d~~--~g~lyv~~~~g~I~~~d~~~g~~~~---~~~~~~~p~~gl~~d~~--G~L~v~d~~~gl~~~~--~~g 123 (351)
.-.++++.++ +..+.++..||.|..||..+++... +........ .+++.++ |+++++....+.+++. .++
T Consensus 55 ~V~~l~~s~~~~~~~l~s~s~Dg~I~vwd~~~~~~~~~~~~~~h~~~V~-~v~~sp~~~~~~l~sgs~dg~I~vwdl~~~ 133 (753)
T 3jro_A 55 PVWRVDWAHPKFGTILASCSYDGKVLIWKEENGRWSQIAVHAVHSASVN-SVQWAPHEYGPLLLVASSDGKVSVVEFKEN 133 (753)
T ss_dssp CEEEEEECCTTSCSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEE-EEEECCGGGCSEEEEEETTSEEEEEECCSS
T ss_pred ceEEEEecCCCCCCEEEEEeCCCeEEEEECCCCcccccccccCCCCCeE-EEEECCCCCCCEEEEEeCCCcEEEEEeecC
Confidence 3457888765 6788899999999999987775322 222334455 8999988 8766665555665554 222
Q ss_pred ----eEEecCCCCCcccEEEcc-------------CCcEEEEeCCCccCCcccccccccccCCceEEEEeCCCCe----E
Q 018705 124 ----VEAIVPDASFTNDVIAAS-------------DGTLYFTVASTKYTPTDFYKDMAEGKPYGQLRKYDPKLKE----T 182 (351)
Q Consensus 124 ----~~~l~~~~~~~n~l~~d~-------------dG~ly~t~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~~~----~ 182 (351)
...+......+.+++++| +|.+.++.+. +|.|..||..++. .
T Consensus 134 ~~~~~~~~~~~~~~v~~l~~~p~~~~~~~~~~~~~d~~~l~sgs~-----------------dg~I~iwd~~~~~~~~~~ 196 (753)
T 3jro_A 134 GTTSPIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGA-----------------DNLVKIWKYNSDAQTYVL 196 (753)
T ss_dssp SCCCCEEEECCSSCEEEEEECCCC---------CGGGCCEEEEET-----------------TSCEEEEEEETTTTEEEE
T ss_pred CCcceeEeecCCCceEEEEecCcccccccccccCCCCCEEEEEEC-----------------CCeEEEEeccCCccccee
Confidence 222322235677888887 4555544433 4667777755432 1
Q ss_pred E-EeecCccccceEEEcCC---CCEEEEEecce--eEEeecCCCCc-e-eEEe-ccCCCCCCceEECCCCCEEEEE
Q 018705 183 T-VLHEGFYFANGIALSKN---EDFVVVCESWK--RYWLKGDRAGI-L-DAFI-ENLPGGPDNINLAPDGSFWIGL 249 (351)
Q Consensus 183 ~-~~~~~~~~~ngi~~~~d---g~~lyv~~~~~--~~~i~~~~~~~-~-~~~~-~~~~g~pd~i~~d~~G~lwva~ 249 (351)
. .+........+++++|+ ++.++.+..++ ++|-....... . .... ....+....++++++|.+.++.
T Consensus 197 ~~~~~~h~~~V~~l~~sp~~~~~~~l~s~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~v~~l~~spdg~~l~s~ 272 (753)
T 3jro_A 197 ESTLEGHSDWVRDVAWSPTVLLRSYLASVSQDRTCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALS 272 (753)
T ss_dssp EEEECCCSSCEEEEEECCCCSSSEEEEEEESSSCEEEEEESSSSSCCBCCBSSSSCCSSCCCCEEECTTTCCEEEE
T ss_pred eeeecCCCCcEEEEEeccCCCCCCEEEEEecCCEEEEecCCCCCCcceeEEeccCCCCCceEEEEEcCCCCEEEEE
Confidence 1 11222345678999999 77666666665 55532111111 0 1111 0122334567888888755554
No 289
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=97.63 E-value=0.03 Score=50.56 Aligned_cols=173 Identities=6% Similarity=0.019 Sum_probs=92.7
Q ss_pred ceEEEeeCCCeEEEEEcCCEEEEEEcCCC-eEEEEeec---CCccccceEEcCCCCEEEEeCCCCeEEEcCCC--eEEec
Q 018705 55 EDVSVVVSKGALYTATRDGWVKYFILHNE-TLVNWKHI---DSQSLLGLTTTKDGGVILCDNEKGLLKVTEEG--VEAIV 128 (351)
Q Consensus 55 e~i~~d~~~g~lyv~~~~g~I~~~d~~~g-~~~~~~~~---~~~p~~gl~~d~~G~L~v~d~~~gl~~~~~~g--~~~l~ 128 (351)
.+|+++ . +.+|+....|.|++- .+.| .++..... .+.+. .|++..++++|++....++++-...| .+...
T Consensus 83 ~~i~~~-~-~~~~~~g~~g~i~~S-~DgG~tW~~~~~~~~~~~~~~-~i~~~~~~~~~~~~~~g~v~~S~DgG~tW~~~~ 158 (327)
T 2xbg_A 83 NSVSFQ-G-NEGWIVGEPPIMLHT-TDGGQSWSQIPLDPKLPGSPR-LIKALGNGSAEMITNVGAIYRTKDSGKNWQALV 158 (327)
T ss_dssp EEEEEE-T-TEEEEEEETTEEEEE-SSTTSSCEECCCCTTCSSCEE-EEEEEETTEEEEEETTCCEEEESSTTSSEEEEE
T ss_pred EEEEec-C-CeEEEEECCCeEEEE-CCCCCCceECccccCCCCCeE-EEEEECCCCEEEEeCCccEEEEcCCCCCCEEee
Confidence 367776 3 678877777877774 3334 34443321 23456 78877788899887655666655445 44443
Q ss_pred CC-CCCcccEEEccCCcEEEEeCCCccCCcccccccccccCCceEEEEeCC-CCeEEEeecC-ccccceEEEcCCCCEEE
Q 018705 129 PD-ASFTNDVIAASDGTLYFTVASTKYTPTDFYKDMAEGKPYGQLRKYDPK-LKETTVLHEG-FYFANGIALSKNEDFVV 205 (351)
Q Consensus 129 ~~-~~~~n~l~~d~dG~ly~t~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~-~~~~~~~~~~-~~~~ngi~~~~dg~~ly 205 (351)
.. .....+++++++|.+|+.... |.+++-+.. ....+.+... -.....++++++++ +|
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~g~~------------------G~~~~S~d~gG~tW~~~~~~~~~~~~~~~~~~~g~-~~ 219 (327)
T 2xbg_A 159 QEAIGVMRNLNRSPSGEYVAVSSR------------------GSFYSTWEPGQTAWEPHNRTTSRRLHNMGFTPDGR-LW 219 (327)
T ss_dssp CSCCCCEEEEEECTTSCEEEEETT------------------SSEEEEECTTCSSCEEEECCSSSCEEEEEECTTSC-EE
T ss_pred cCCCcceEEEEEcCCCcEEEEECC------------------CcEEEEeCCCCCceeECCCCCCCccceeEECCCCC-EE
Confidence 32 245677888888888865532 456665422 2223332211 12345677888886 67
Q ss_pred EEecceeEEeecCCCCc-eeEEecc-CCCC--CCceEECCCCCEEEEEe
Q 018705 206 VCESWKRYWLKGDRAGI-LDAFIEN-LPGG--PDNINLAPDGSFWIGLI 250 (351)
Q Consensus 206 v~~~~~~~~i~~~~~~~-~~~~~~~-~~g~--pd~i~~d~~G~lwva~~ 250 (351)
+....+.+.......+. .+..... ++.. ...+.+++++.+|++..
T Consensus 220 ~~~~~G~~~~s~~D~G~tW~~~~~~~~~~~~~~~~v~~~~~~~~~~~g~ 268 (327)
T 2xbg_A 220 MIVNGGKIAFSDPDNSENWGELLSPLRRNSVGFLDLAYRTPNEVWLAGG 268 (327)
T ss_dssp EEETTTEEEEEETTEEEEECCCBCTTSSCCSCEEEEEESSSSCEEEEES
T ss_pred EEeCCceEEEecCCCCCeeEeccCCcccCCcceEEEEecCCCEEEEEeC
Confidence 65544433322111111 1111101 1110 12345677888988754
No 290
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=97.62 E-value=0.00054 Score=66.66 Aligned_cols=140 Identities=14% Similarity=0.059 Sum_probs=93.5
Q ss_pred CCceEEEeeCCCeEEEEEcCCEEEEEEcCCCeE--EEEeecCCccccce--EEcCCC-CEEEEeCCCCeEEEcC--CC--
Q 018705 53 HPEDVSVVVSKGALYTATRDGWVKYFILHNETL--VNWKHIDSQSLLGL--TTTKDG-GVILCDNEKGLLKVTE--EG-- 123 (351)
Q Consensus 53 ~pe~i~~d~~~g~lyv~~~~g~I~~~d~~~g~~--~~~~~~~~~p~~gl--~~d~~G-~L~v~d~~~gl~~~~~--~g-- 123 (351)
...++++.+ ++.|.++..||.|..||..+++. ..+........ .+ ++.++| +++++.+..+.++++. ++
T Consensus 268 ~v~sv~~s~-~~~lasgs~DgtV~lWD~~~~~~~~~~~~~H~~~V~-sv~~~~s~~g~~~laS~S~D~tvklWD~~~~~~ 345 (524)
T 2j04_B 268 LITTFDFLS-PTTVVCGFKNGFVAEFDLTDPEVPSFYDQVHDSYIL-SVSTAYSDFEDTVVSTVAVDGYFYIFNPKDIAT 345 (524)
T ss_dssp CEEEEEESS-SSEEEEEETTSEEEEEETTBCSSCSEEEECSSSCEE-EEEEECCTTSCCEEEEEETTSEEEEECGGGHHH
T ss_pred CEEEEEecC-CCeEEEEeCCCEEEEEECCCCCCceEEeecccccEE-EEEEEcCCCCCeEEEEeccCCeEEEEECCCCCc
Confidence 345788874 57899999999999999876532 22333334445 77 456777 7877777778888873 44
Q ss_pred eEEecCCC--CCcccEEEccCCcEEEEeCCCccCCcccccccccccCCceEEEEeCCCCeE-EEeecCccccceEEEcCC
Q 018705 124 VEAIVPDA--SFTNDVIAASDGTLYFTVASTKYTPTDFYKDMAEGKPYGQLRKYDPKLKET-TVLHEGFYFANGIALSKN 200 (351)
Q Consensus 124 ~~~l~~~~--~~~n~l~~d~dG~ly~t~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~~~~-~~~~~~~~~~ngi~~~~d 200 (351)
...+.... ..+..++++|+|..+++.+. ++.|..||..+++. ..+.......+.|+++|+
T Consensus 346 ~~~~~~~~~~~~v~~v~fsp~~~~l~s~~~-----------------d~tv~lwd~~~~~~~~~l~gH~~~V~sva~Sp~ 408 (524)
T 2j04_B 346 TKTTVSRFRGSNLVPVVYCPQIYSYIYSDG-----------------ASSLRAVPSRAAFAVHPLVSRETTITAIGVSRL 408 (524)
T ss_dssp HCEEEEECSCCSCCCEEEETTTTEEEEECS-----------------SSEEEEEETTCTTCCEEEEECSSCEEEEECCSS
T ss_pred ccccccccccCcccceEeCCCcCeEEEeCC-----------------CCcEEEEECcccccceeeecCCCceEEEEeCCC
Confidence 33332211 24678999999988777654 35688888776543 333444456788999999
Q ss_pred CCEEEEEecce
Q 018705 201 EDFVVVCESWK 211 (351)
Q Consensus 201 g~~lyv~~~~~ 211 (351)
|+.|..+..++
T Consensus 409 g~~l~Sgs~Dg 419 (524)
T 2j04_B 409 HPMVLAGSADG 419 (524)
T ss_dssp CCBCEEEETTT
T ss_pred CCeEEEEECCC
Confidence 99666666555
No 291
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=97.59 E-value=0.0024 Score=54.32 Aligned_cols=132 Identities=13% Similarity=0.015 Sum_probs=79.6
Q ss_pred ccccceEEcCCCCEEEEeCCCCeEEEcC-C-------C-eEEecC-CCCCcccEEEccCCcEEEEeCCCccCCccccccc
Q 018705 94 QSLLGLTTTKDGGVILCDNEKGLLKVTE-E-------G-VEAIVP-DASFTNDVIAASDGTLYFTVASTKYTPTDFYKDM 163 (351)
Q Consensus 94 ~p~~gl~~d~~G~L~v~d~~~gl~~~~~-~-------g-~~~l~~-~~~~~n~l~~d~dG~ly~t~~~~~~~~~~~~~~~ 163 (351)
+.. .++++++|.||++ ....++++++ + + .+.+.. ..+....+.+|++|.||+..
T Consensus 42 ~~~-~laf~P~G~LYaV-~~G~Ly~~~~~t~~~~~W~~s~t~IG~~Gw~~F~a~~fD~~G~LYav~-------------- 105 (236)
T 1tl2_A 42 NFK-FLFLSPGGELYGV-LNDKIYKGTPPTHDNDNWMGRAKKIGNGGWNQFQFLFFDPNGYLYAVS-------------- 105 (236)
T ss_dssp TCS-EEEECTTSCEEEE-ETTEEEEESCCCSTTCCHHHHCEEEECSCGGGCSEEEECTTSCEEEEE--------------
T ss_pred cce-eEEECCCccEEEE-eCCeEEEECCCCCCcccccccccEecccccccceEEEECCCCCEEEeC--------------
Confidence 344 8999999999999 4556999985 5 2 233322 12456889999999999983
Q ss_pred ccccCCceEEEEeCCCCe-E------EEeec-CccccceEEEcCCCCEEEEEeccee-EEeecCCCCc------eeEEe-
Q 018705 164 AEGKPYGQLRKYDPKLKE-T------TVLHE-GFYFANGIALSKNEDFVVVCESWKR-YWLKGDRAGI------LDAFI- 227 (351)
Q Consensus 164 ~~~~~~g~l~~~d~~~~~-~------~~~~~-~~~~~ngi~~~~dg~~lyv~~~~~~-~~i~~~~~~~------~~~~~- 227 (351)
+|.|+|+++.+.. - +.+.. +...-.-|.++|+|. ||... +++ |+...+.... .+.+.
T Consensus 106 -----dG~iyr~~pP~~~~~~Wl~~a~~vg~~gw~~~~~lff~p~G~-Lyav~-dg~lyr~~~P~~~~~~wl~~~~~~g~ 178 (236)
T 1tl2_A 106 -----KDKLYKASPPQSDTDNWIARATEVGSGGWSGFKFLFFHPNGY-LYAVH-GQQFYKALPPVSNQDNWLARATKIGQ 178 (236)
T ss_dssp -----TTEEEEESCCCSTTCCHHHHSEEEECSSGGGEEEEEECTTSC-EEEEE-TTEEEEECCCSSTTCCHHHHCEEEES
T ss_pred -----CCEEEEeCCCcCCCCceeccccEeccCCCCceEEEEECCCce-EEEEe-CCcEEecCCCCCCCcccccccceecc
Confidence 3689999874311 1 12222 223346689999998 98877 553 3333221111 11221
Q ss_pred ccCCCCCCceEECCCCCEEEEE
Q 018705 228 ENLPGGPDNINLAPDGSFWIGL 249 (351)
Q Consensus 228 ~~~~g~pd~i~~d~~G~lwva~ 249 (351)
....-+ .-+.++++|+||...
T Consensus 179 ~g~~~y-r~l~f~~~G~l~~v~ 199 (236)
T 1tl2_A 179 GGWDTF-KFLFFSSVGTLFGVQ 199 (236)
T ss_dssp SSGGGE-EEEEECTTSCEEEEE
T ss_pred CCcceE-EEEEECCCCcEEEEe
Confidence 110001 114688889888876
No 292
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=97.54 E-value=0.0025 Score=66.07 Aligned_cols=140 Identities=11% Similarity=0.008 Sum_probs=91.6
Q ss_pred CceEEEeeCCCeEEEEEcCCEEEEEEcCCCeEE-EEeecCCccccceEEcCCCCEEEEeCCCCeEEEc-C-CC-eEEec-
Q 018705 54 PEDVSVVVSKGALYTATRDGWVKYFILHNETLV-NWKHIDSQSLLGLTTTKDGGVILCDNEKGLLKVT-E-EG-VEAIV- 128 (351)
Q Consensus 54 pe~i~~d~~~g~lyv~~~~g~I~~~d~~~g~~~-~~~~~~~~p~~gl~~d~~G~L~v~d~~~gl~~~~-~-~g-~~~l~- 128 (351)
-.+++|.+ +..|.++..|+.|..||..+++.. .+. ...... .++++++|+..++....|.++++ . .+ ...+.
T Consensus 61 V~~l~fsp-g~~L~S~s~D~~v~lWd~~~~~~~~~~~-~~~~V~-~v~~sp~g~~l~sgs~dg~V~lwd~~~~~~~~~~i 137 (902)
T 2oaj_A 61 IKEMRFVK-GIYLVVINAKDTVYVLSLYSQKVLTTVF-VPGKIT-SIDTDASLDWMLIGLQNGSMIVYDIDRDQLSSFKL 137 (902)
T ss_dssp EEEEEEET-TTEEEEEETTCEEEEEETTTCSEEEEEE-CSSCEE-EEECCTTCSEEEEEETTSCEEEEETTTTEEEEEEE
T ss_pred EEEEEEcC-CCEEEEEECcCeEEEEECCCCcEEEEEc-CCCCEE-EEEECCCCCEEEEEcCCCcEEEEECCCCcccccee
Confidence 46889996 666888899999999999777643 332 334566 89999999765544445555555 3 44 32211
Q ss_pred -----------CCCCCcccEEEccCC-cEEEEeCCCccCCcccccccccccCCceEEEEeCCCCeEEEeecCc-------
Q 018705 129 -----------PDASFTNDVIAASDG-TLYFTVASTKYTPTDFYKDMAEGKPYGQLRKYDPKLKETTVLHEGF------- 189 (351)
Q Consensus 129 -----------~~~~~~n~l~~d~dG-~ly~t~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~~~~~~~~~~~------- 189 (351)
.....+.+++++|++ .+.++... +|.+ .||..+++........
T Consensus 138 ~~~~~~~~~~~~h~~~V~sl~~sp~~~~~l~~g~~-----------------dg~v-lWd~~~~~~~~~~~~~~~~g~~~ 199 (902)
T 2oaj_A 138 DNLQKSSFFPAARLSPIVSIQWNPRDIGTVLISYE-----------------YVTL-TYSLVENEIKQSFIYELPPFAPG 199 (902)
T ss_dssp CCHHHHHTCSSSCCCCCCEEEEETTEEEEEEEECS-----------------SCEE-EEETTTTEEEEEECCCBCTTCCC
T ss_pred ccccccccccccCCCCeEEEEEccCCCCEEEEEeC-----------------CCcE-EEECCCCceEEEEecccCCcCCC
Confidence 112578899999964 44444332 4678 9998877654332211
Q ss_pred ------------cccceEEEcCCCCEEEEEecce--eEE
Q 018705 190 ------------YFANGIALSKNEDFVVVCESWK--RYW 214 (351)
Q Consensus 190 ------------~~~ngi~~~~dg~~lyv~~~~~--~~~ 214 (351)
...+.++++|||+.|..+..++ ++|
T Consensus 200 ~~~~~~~~~~h~~~V~~v~fspdg~~lasgs~Dg~i~lW 238 (902)
T 2oaj_A 200 GDFSEKTNEKRTPKVIQSLYHPNSLHIITIHEDNSLVFW 238 (902)
T ss_dssp STTCCCTTSCBCCCEEEEEECTTSSEEEEEETTCCEEEE
T ss_pred cccccccccccCCCeEEEEEcCCCCEEEEEECCCeEEEE
Confidence 3467899999999776666666 566
No 293
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=97.50 E-value=0.0039 Score=60.55 Aligned_cols=176 Identities=14% Similarity=0.041 Sum_probs=102.6
Q ss_pred CceEEEeeC------CCeEEEEEcCCEEEEEEcCCCeEE------------EEeecCCccccceEEcCCCCEEEEeCCCC
Q 018705 54 PEDVSVVVS------KGALYTATRDGWVKYFILHNETLV------------NWKHIDSQSLLGLTTTKDGGVILCDNEKG 115 (351)
Q Consensus 54 pe~i~~d~~------~g~lyv~~~~g~I~~~d~~~g~~~------------~~~~~~~~p~~gl~~d~~G~L~v~d~~~g 115 (351)
..+++|.|. ++.|.++..||.|..||..+++.. .+........ ++++.+++.|..+. ..|
T Consensus 210 V~~v~wsp~~~~~~~~~~LAs~s~DgtvrlWd~~~~~~~~~~~~~~~~p~~~l~~h~~~v~-sv~~s~~~~lasgs-~Dg 287 (524)
T 2j04_B 210 VWDLKWHEGCHAPHLVGCLSFVSQEGTINFLEIIDNATDVHVFKMCEKPSLTLSLADSLIT-TFDFLSPTTVVCGF-KNG 287 (524)
T ss_dssp EEEEEECSSCCCSSSSCEEEEEETTSCEEEEECCCCSSSSSEEECCCSCSEEECCTTTCEE-EEEESSSSEEEEEE-TTS
T ss_pred EEEEEECCCCCCCCCCceEEEEecCCeEEEEEcCCCccccccceeecCceEEEEcCCCCEE-EEEecCCCeEEEEe-CCC
Confidence 467888864 357778889999999998655311 1222223445 78887766555554 456
Q ss_pred eEEEc-C-CC---eEEecCCCCCcccE--EEccCC-cEEEEeCCCccCCcccccccccccCCceEEEEeCCCCeEE-Eee
Q 018705 116 LLKVT-E-EG---VEAIVPDASFTNDV--IAASDG-TLYFTVASTKYTPTDFYKDMAEGKPYGQLRKYDPKLKETT-VLH 186 (351)
Q Consensus 116 l~~~~-~-~g---~~~l~~~~~~~n~l--~~d~dG-~ly~t~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~~~~~-~~~ 186 (351)
.+++. . ++ ...+......+++| +..++| .+.+|.+. ++.|..||..+++.. .+.
T Consensus 288 tV~lWD~~~~~~~~~~~~~H~~~V~sv~~~~s~~g~~~laS~S~-----------------D~tvklWD~~~~~~~~~~~ 350 (524)
T 2j04_B 288 FVAEFDLTDPEVPSFYDQVHDSYILSVSTAYSDFEDTVVSTVAV-----------------DGYFYIFNPKDIATTKTTV 350 (524)
T ss_dssp EEEEEETTBCSSCSEEEECSSSCEEEEEEECCTTSCCEEEEEET-----------------TSEEEEECGGGHHHHCEEE
T ss_pred EEEEEECCCCCCceEEeecccccEEEEEEEcCCCCCeEEEEecc-----------------CCeEEEEECCCCCcccccc
Confidence 66665 2 33 33343333567888 457787 78777765 567888887654321 111
Q ss_pred cCc--cccceEEEcCCCCEEEEEecce--eEEeecCCCCc-eeEEeccCCCCCCceEECCCCCEEEEEec
Q 018705 187 EGF--YFANGIALSKNEDFVVVCESWK--RYWLKGDRAGI-LDAFIENLPGGPDNINLAPDGSFWIGLIK 251 (351)
Q Consensus 187 ~~~--~~~ngi~~~~dg~~lyv~~~~~--~~~i~~~~~~~-~~~~~~~~~g~pd~i~~d~~G~lwva~~~ 251 (351)
... .....++++|+++.+..+..++ ++|- ...+. ...+. ...+....++++++|.+.++...
T Consensus 351 ~~~~~~~v~~v~fsp~~~~l~s~~~d~tv~lwd--~~~~~~~~~l~-gH~~~V~sva~Sp~g~~l~Sgs~ 417 (524)
T 2j04_B 351 SRFRGSNLVPVVYCPQIYSYIYSDGASSLRAVP--SRAAFAVHPLV-SRETTITAIGVSRLHPMVLAGSA 417 (524)
T ss_dssp EECSCCSCCCEEEETTTTEEEEECSSSEEEEEE--TTCTTCCEEEE-ECSSCEEEEECCSSCCBCEEEET
T ss_pred cccccCcccceEeCCCcCeEEEeCCCCcEEEEE--Ccccccceeee-cCCCceEEEEeCCCCCeEEEEEC
Confidence 111 1246799999998554444444 5552 22222 12222 22233456788888886666543
No 294
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=97.47 E-value=0.026 Score=56.92 Aligned_cols=140 Identities=11% Similarity=0.048 Sum_probs=76.6
Q ss_pred ceEEEeeCCCeE-EEEEcCC----EEEEEEcCCCeEEEEeecCCccccceEEcCCCCEEEEeCCCC--------------
Q 018705 55 EDVSVVVSKGAL-YTATRDG----WVKYFILHNETLVNWKHIDSQSLLGLTTTKDGGVILCDNEKG-------------- 115 (351)
Q Consensus 55 e~i~~d~~~g~l-yv~~~~g----~I~~~d~~~g~~~~~~~~~~~p~~gl~~d~~G~L~v~d~~~g-------------- 115 (351)
.+++++|++..+ |.....| .|+.+|..+|+............ ++++.+|..|+++.....
T Consensus 166 ~~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~tg~~~~~~~~~~~~~-~~~wspD~~l~~~~~~~~~~~~~~~~~~~~~~ 244 (741)
T 1yr2_A 166 DAWAASDDGRLLAYSVQDGGSDWRTVKFVGVADGKPLADELKWVKFS-GLAWLGNDALLYSRFAEPKEGQAFQALNYNQT 244 (741)
T ss_dssp EEEEECTTSSEEEEEEEETTCSEEEEEEEETTTCCEEEEEEEEEESC-CCEESTTSEEEEEECCCC--------CCCCCE
T ss_pred EeEEECCCCCEEEEEEcCCCCceEEEEEEECCCCCCCCccCCCceec-cEEEECCCEEEEEEecCcccccccccCCCCCE
Confidence 356888776665 4444333 49999998887644321112224 788887744555543222
Q ss_pred eEEEcC-CC-e--EEecCC-C--CCcccEEEccCCc-EEEEeCCCccCCcccccccccccCCceEEEEeCCCC--e-EEE
Q 018705 116 LLKVTE-EG-V--EAIVPD-A--SFTNDVIAASDGT-LYFTVASTKYTPTDFYKDMAEGKPYGQLRKYDPKLK--E-TTV 184 (351)
Q Consensus 116 l~~~~~-~g-~--~~l~~~-~--~~~n~l~~d~dG~-ly~t~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~~--~-~~~ 184 (351)
+++.+. ++ . ..+... . .+..++.+++||+ |.++..... .....|+.+|.+++ + .+.
T Consensus 245 v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~-------------~~~~~l~~~d~~~~~~~~~~~ 311 (741)
T 1yr2_A 245 VWLHRLGTPQSADQPVFATPELPKRGHGASVSSDGRWVVITSSEGT-------------DPVNTVHVARVTNGKIGPVTA 311 (741)
T ss_dssp EEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECTT-------------CSCCEEEEEEEETTEECCCEE
T ss_pred EEEEECCCCchhCEEEeccCCCCeEEEEEEECCCCCEEEEEEEccC-------------CCcceEEEEECCCCCCcccEE
Confidence 455443 23 1 222221 1 2456788999995 554432200 01347888887766 4 455
Q ss_pred eecCccccceEEEcCCCCEEEEEec
Q 018705 185 LHEGFYFANGIALSKNEDFVVVCES 209 (351)
Q Consensus 185 ~~~~~~~~ngi~~~~dg~~lyv~~~ 209 (351)
+.......... ++++|+.+|+...
T Consensus 312 l~~~~~~~~~~-~~~dg~~l~~~s~ 335 (741)
T 1yr2_A 312 LIPDLKAQWDF-VDGVGDQLWFVSG 335 (741)
T ss_dssp EECSSSSCEEE-EEEETTEEEEEEC
T ss_pred ecCCCCceEEE-EeccCCEEEEEEC
Confidence 54433222223 4588888888654
No 295
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=97.40 E-value=0.097 Score=52.25 Aligned_cols=178 Identities=11% Similarity=0.042 Sum_probs=92.9
Q ss_pred ceEEEeeCCCeEEEEEcCCE-------------EEEEEcCCCeE---EEEeecC--CccccceEEcCCCC-EEEEeCCC-
Q 018705 55 EDVSVVVSKGALYTATRDGW-------------VKYFILHNETL---VNWKHID--SQSLLGLTTTKDGG-VILCDNEK- 114 (351)
Q Consensus 55 e~i~~d~~~g~lyv~~~~g~-------------I~~~d~~~g~~---~~~~~~~--~~p~~gl~~d~~G~-L~v~d~~~- 114 (351)
.+++|.|++..|+.+..+.. |++++..+++. ..+.... .... ++.++++|+ |.++....
T Consensus 171 ~~~~wspDg~~l~~~~~d~~~~~~~~~~~~~~~v~~~~l~t~~~~~~lv~~~~~~~~~~~-~~~~SpDG~~l~~~~~~~~ 249 (695)
T 2bkl_A 171 ATPKWTPDSKGFYYEWLPTDPSIKVDERPGYTTIRYHTLGTEPSKDTVVHERTGDPTTFL-QSDLSRDGKYLFVYILRGW 249 (695)
T ss_dssp CCCEECTTSSEEEEEECCCCTTSCGGGGGGGCEEEEEETTSCGGGCEEEECCCCCTTCEE-EEEECTTSCCEEEEEEETT
T ss_pred cceEEecCCCEEEEEEecCCCCCccccCCCCCEEEEEECCCCchhceEEEecCCCCEEEE-EEEECCCCCEEEEEEeCCC
Confidence 57899977777766655443 99999866642 2222211 2345 788999995 44433222
Q ss_pred ---CeEEEcC-CC-eEEecCCCCCcccEEEccCCcEEEEeCCCccCCcccccccccccCCceEEEEeCCCCe---EEEee
Q 018705 115 ---GLLKVTE-EG-VEAIVPDASFTNDVIAASDGTLYFTVASTKYTPTDFYKDMAEGKPYGQLRKYDPKLKE---TTVLH 186 (351)
Q Consensus 115 ---gl~~~~~-~g-~~~l~~~~~~~n~l~~d~dG~ly~t~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~~~---~~~~~ 186 (351)
.++.++. ++ .+.+............ ++|.+|+.... ..+.++|+++|.++++ .+.+.
T Consensus 250 ~~~~l~~~~~~~~~~~~l~~~~~~~~~~~~-~~g~l~~~s~~--------------~~~~~~l~~~d~~~~~~~~~~~l~ 314 (695)
T 2bkl_A 250 SENDVYWKRPGEKDFRLLVKGVGAKYEVHA-WKDRFYVLTDE--------------GAPRQRVFEVDPAKPARASWKEIV 314 (695)
T ss_dssp TEEEEEEECTTCSSCEEEEECSSCCEEEEE-ETTEEEEEECT--------------TCTTCEEEEEBTTBCSGGGCEEEE
T ss_pred CceEEEEEcCCCCceEEeecCCCceEEEEe-cCCcEEEEECC--------------CCCCCEEEEEeCCCCCccCCeEEe
Confidence 4666654 55 5555443222233333 55557776542 1125689999987665 23333
Q ss_pred c-C-ccccceEEEcCCCCEEEEEecce---eEEeecCCCCceeEEeccCCCCCCceEECCCCC-EEEEEe
Q 018705 187 E-G-FYFANGIALSKNEDFVVVCESWK---RYWLKGDRAGILDAFIENLPGGPDNINLAPDGS-FWIGLI 250 (351)
Q Consensus 187 ~-~-~~~~ngi~~~~dg~~lyv~~~~~---~~~i~~~~~~~~~~~~~~~~g~pd~i~~d~~G~-lwva~~ 250 (351)
. . -....+++++ ++ .++++.... ++|+.+...+..+.+.....+...++.++++|. ++++..
T Consensus 315 ~~~~~~~l~~~~~~-~~-~lv~~~~~dg~~~l~~~~~~g~~~~~l~~~~~~~v~~~~~s~d~~~l~~~~s 382 (695)
T 2bkl_A 315 PEDSSASLLSVSIV-GG-HLSLEYLKDATSEVRVATLKGKPVRTVQLPGVGAASNLMGLEDLDDAYYVFT 382 (695)
T ss_dssp CCCSSCEEEEEEEE-TT-EEEEEEEETTEEEEEEEETTCCEEEECCCSSSSEECCCBSCTTCSEEEEEEE
T ss_pred cCCCCCeEEEEEEE-CC-EEEEEEEECCEEEEEEEeCCCCeeEEecCCCCeEEEEeecCCCCCEEEEEEc
Confidence 2 2 2234567777 44 466654332 666554221222222101112223455667775 555543
No 296
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=97.37 E-value=0.0054 Score=55.95 Aligned_cols=82 Identities=17% Similarity=0.160 Sum_probs=56.4
Q ss_pred EEcCCEEEEEEcCCCe-----------------EEEEeecCCccccceEEcCCCCEEEEeCCCCe-EEEc--CCC--eEE
Q 018705 69 ATRDGWVKYFILHNET-----------------LVNWKHIDSQSLLGLTTTKDGGVILCDNEKGL-LKVT--EEG--VEA 126 (351)
Q Consensus 69 ~~~~g~I~~~d~~~g~-----------------~~~~~~~~~~p~~gl~~d~~G~L~v~d~~~gl-~~~~--~~g--~~~ 126 (351)
+..+|.|..||..+++ ...+........ .++++++|+++++....+. ++++ .++ ...
T Consensus 155 g~~~g~v~iwd~~~~~~~~~~~~~~~~~~~~p~~~~~~~h~~~v~-~~~~s~~g~~l~s~s~d~~~v~iwd~~~~~~~~~ 233 (355)
T 3vu4_A 155 EFNLGQIHITKLQSSGSATTQDQGVQQKAILGKGVLIKAHTNPIK-MVRLNRKSDMVATCSQDGTIIRVFKTEDGVLVRE 233 (355)
T ss_dssp SSCTTCEEEEECCC------------------CCEEECCCSSCEE-EEEECTTSSEEEEEETTCSEEEEEETTTCCEEEE
T ss_pred CCcCcEEEEEECCCCCccccccccccccccCcccEEEEccCCceE-EEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEE
Confidence 4678888888886654 333433345566 8999999988777666674 7776 355 555
Q ss_pred ecC--CCCCcccEEEccCCcEEEEeCC
Q 018705 127 IVP--DASFTNDVIAASDGTLYFTVAS 151 (351)
Q Consensus 127 l~~--~~~~~n~l~~d~dG~ly~t~~~ 151 (351)
+.. ....+++++++|||.+.++.+.
T Consensus 234 ~~~g~h~~~v~~~~~s~~~~~l~s~s~ 260 (355)
T 3vu4_A 234 FRRGLDRADVVDMKWSTDGSKLAVVSD 260 (355)
T ss_dssp EECTTCCSCEEEEEECTTSCEEEEEET
T ss_pred EEcCCCCCcEEEEEECCCCCEEEEEEC
Confidence 552 3367899999999988777654
No 297
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=97.37 E-value=0.019 Score=54.20 Aligned_cols=139 Identities=9% Similarity=0.044 Sum_probs=86.6
Q ss_pred CceEEEeeCCCeEEEEEcCCEEEEEEcCC-----------CeEEEE-----eecCCccccceEEcCCCCEEE----EeCC
Q 018705 54 PEDVSVVVSKGALYTATRDGWVKYFILHN-----------ETLVNW-----KHIDSQSLLGLTTTKDGGVIL----CDNE 113 (351)
Q Consensus 54 pe~i~~d~~~g~lyv~~~~g~I~~~d~~~-----------g~~~~~-----~~~~~~p~~gl~~d~~G~L~v----~d~~ 113 (351)
...+++++.++.++++..++ +..++..+ ...... ......+. .++++++|++++ +...
T Consensus 39 ~n~lavs~~~~~l~~~~~dg-v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~-~l~~spdg~~lav~~~sgs~ 116 (434)
T 2oit_A 39 SSLLAVSNKYGLVFAGGASG-LQIFPTKNLLIQNKPGDDPNKIVDKVQGLLVPMKFPIH-HLALSCDNLTLSACMMSSEY 116 (434)
T ss_dssp CBCEEEETTTTEEEEEETTE-EEEEEHHHHCCCCCTTCCTTCEEECCCCEEECCSSCEE-EEEECTTSCEEEEEEEETTT
T ss_pred ccEEEEecCCCEEEEECCCE-EEEEEchHhhhhcccccCcccccccCccccccCCCccc-EEEEcCCCCEEEEEEeccCC
Confidence 45789998888999988777 66654210 111111 11123466 899999998666 3344
Q ss_pred CCeEEEcC--C---------C-eEEecC---CCCCcccEEEccC-CcEEEEeCCCccCCcccccccccccCCceEEEEeC
Q 018705 114 KGLLKVTE--E---------G-VEAIVP---DASFTNDVIAASD-GTLYFTVASTKYTPTDFYKDMAEGKPYGQLRKYDP 177 (351)
Q Consensus 114 ~gl~~~~~--~---------g-~~~l~~---~~~~~n~l~~d~d-G~ly~t~~~~~~~~~~~~~~~~~~~~~g~l~~~d~ 177 (351)
.+.++++. + . +..+.. ....+.++++.|+ +.++++.+. +|.|..||.
T Consensus 117 d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~las~s~-----------------Dg~v~iwD~ 179 (434)
T 2oit_A 117 GSIIAFFDVRTFSNEAKQQKRPFAYHKLLKDAGGMVIDMKWNPTVPSMVAVCLA-----------------DGSIAVLQV 179 (434)
T ss_dssp EEEEEEEEHHHHHCTTCSSCCCSEEEECCCSGGGSEEEEEECSSCTTEEEEEET-----------------TSCEEEEEE
T ss_pred CceEEEEEccccccCCcCCcceeeeeeccCCCCCceEEEEECCCCCCEEEEEEC-----------------CCeEEEEEc
Confidence 45555541 1 1 111111 1256889999997 677776654 567899988
Q ss_pred CCCeEEEee-cCccccceEEEcCCCCEEEEEecce
Q 018705 178 KLKETTVLH-EGFYFANGIALSKNEDFVVVCESWK 211 (351)
Q Consensus 178 ~~~~~~~~~-~~~~~~ngi~~~~dg~~lyv~~~~~ 211 (351)
.+++..... .......+++++|+|+.|+.+..++
T Consensus 180 ~~~~~~~~~~~~~~~v~~v~wspdg~~lasgs~dg 214 (434)
T 2oit_A 180 TETVKVCATLPSTVAVTSVCWSPKGKQLAVGKQNG 214 (434)
T ss_dssp SSSEEEEEEECGGGCEEEEEECTTSSCEEEEETTS
T ss_pred CCCcceeeccCCCCceeEEEEcCCCCEEEEEcCCC
Confidence 766433222 2234578899999999888877666
No 298
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=97.35 E-value=0.15 Score=50.85 Aligned_cols=58 Identities=17% Similarity=0.336 Sum_probs=39.0
Q ss_pred CCceEEEEEECCCCeEEEEEECCCCCcccceeEEEEECCEEEEEecC---------------------CCeEEEEeCCCC
Q 018705 286 DAGARVVKVDGNDGKIIRDFNDPDATYISFVTSAAEFDGNLYLASLQ---------------------SNFIGILPLDGP 344 (351)
Q Consensus 286 ~~~~~v~~~~~~~g~~~~~~~~~~g~~~~~~~~~~~~~g~L~ig~~~---------------------~~~i~~~~~~~~ 344 (351)
...+.+..+|.++|+++..+..+.+.....+ ....+|++|++..+ .+.|..+.+.+.
T Consensus 476 ~~dg~l~a~d~~tG~~l~~~~~~~~~~~~p~--~~~~~G~~yva~~~G~g~~~~~~~~~~~~~~~~~~~~~i~~~~l~g~ 553 (668)
T 1kv9_A 476 TAAGQMHAYSADKGEALWQFEAQSGIVAAPM--TFELAGRQYVAIMAGWGGVATLTGGESMNLPGMKNRSRLLVFALDGK 553 (668)
T ss_dssp CTTSEEEEEETTTCCEEEEEECSSCCCSCCE--EEEETTEEEEEEEECCCSHHHHHCCGGGGSTTCCCCCEEEEEEETCC
T ss_pred CCcccchhhhhhcChhheEecCCCCcccCce--EEEECCEEEEEEEecCCCccccccccccccccCCCCCeEEEEEcCcc
Confidence 3346789999878999998887654322222 22568888887654 347888887765
Q ss_pred C
Q 018705 345 E 345 (351)
Q Consensus 345 ~ 345 (351)
+
T Consensus 554 ~ 554 (668)
T 1kv9_A 554 A 554 (668)
T ss_dssp C
T ss_pred C
Confidence 4
No 299
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=97.29 E-value=0.015 Score=52.21 Aligned_cols=169 Identities=9% Similarity=-0.046 Sum_probs=94.1
Q ss_pred CceEEEeeCCCeEEEEEc---------------------------CCEEEEEEcCCCeE-EEEeecCCccccceEEcCCC
Q 018705 54 PEDVSVVVSKGALYTATR---------------------------DGWVKYFILHNETL-VNWKHIDSQSLLGLTTTKDG 105 (351)
Q Consensus 54 pe~i~~d~~~g~lyv~~~---------------------------~g~I~~~d~~~g~~-~~~~~~~~~p~~gl~~d~~G 105 (351)
..+++|+|++..|+.... ..+|++++..+++. +.+.. . ... .++++++|
T Consensus 106 ~~~~~wspdg~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~l~~-~-~~~-~~~~spdg 182 (347)
T 2gop_A 106 IRSLEWNEDSRKLLIVGFKRREDEDFIFEDDVPAWFDDLGFFDGEKTTFWIFDTESEEVIEEFEK-P-RFS-SGIWHRDK 182 (347)
T ss_dssp EEEEEECTTSSEEEEEEECCCC---------CCCC---------CEEEEEEEETTTTEEEEEEEE-E-TTC-EEEEETTE
T ss_pred ccceeECCCCCEEEEEEccCCCcCCcEEEcccceeecCcccccCccceEEEEECCCCeEEeeecC-C-Ccc-cccCCCCe
Confidence 567889877776765542 25799999988877 55544 3 555 78899999
Q ss_pred CEEEEe-C---------CCCeEEEcCCC-eEEecCCCCCcccEEEccCCc-EEEEeCCCccCCcccccccccccCCceEE
Q 018705 106 GVILCD-N---------EKGLLKVTEEG-VEAIVPDASFTNDVIAASDGT-LYFTVASTKYTPTDFYKDMAEGKPYGQLR 173 (351)
Q Consensus 106 ~L~v~d-~---------~~gl~~~~~~g-~~~l~~~~~~~n~l~~d~dG~-ly~t~~~~~~~~~~~~~~~~~~~~~g~l~ 173 (351)
++++. . ...++.++ ++ .+.+... .... .++|||+ |++........ ......|+
T Consensus 183 -~~~~~~~~~~~~~~~~~~~l~~~d-~~~~~~l~~~-~~~~--~~spdg~~l~~~~~~~~~~----------~~~~~~l~ 247 (347)
T 2gop_A 183 -IVVNVPHREIIPQYFKFWDIYIWE-DGKEEKMFEK-VSFY--AVDSDGERILLYGKPEKKY----------MSEHNKLY 247 (347)
T ss_dssp -EEEEEECCCSSCCSSCCEEEEEEE-TTEEEEEEEE-ESEE--EEEECSSCEEEEECCSSSC----------CCSSCEEE
T ss_pred -EEEEEecccccccccccccEEEeC-CCceEEeccC-ccee--eECCCCCEEEEEEccccCC----------ccccceEE
Confidence 55543 2 12467777 66 5555433 2222 3388984 65544321100 01235799
Q ss_pred EEeCCCCeEEEeecCcc-ccce-EEEcCCCCEEEEEecce--eEEeecCCCCceeEEeccCCCCCCceEECCCCCEEEEE
Q 018705 174 KYDPKLKETTVLHEGFY-FANG-IALSKNEDFVVVCESWK--RYWLKGDRAGILDAFIENLPGGPDNINLAPDGSFWIGL 249 (351)
Q Consensus 174 ~~d~~~~~~~~~~~~~~-~~ng-i~~~~dg~~lyv~~~~~--~~~i~~~~~~~~~~~~~~~~g~pd~i~~d~~G~lwva~ 249 (351)
.+| +++.+.+..... .... ++++ |+ .++.+...+ ++| .+ .++...+... .+....+.+++ .++++.
T Consensus 248 ~~d--~~~~~~l~~~~~~~~~~~~~~s-dg-~~~~~~~~~~~~l~-~~--~g~~~~~~~~-~~~v~~~~~s~--~~~~~~ 317 (347)
T 2gop_A 248 IYD--GKEVMGILDEVDRGVGQAKIKD-GK-VYFTLFEEGSVNLY-IW--DGEIKPIAKG-RHWIMGFDVDE--IVVYLK 317 (347)
T ss_dssp EEC--SSCEEESSTTCCSEEEEEEEET-TE-EEEEEEETTEEEEE-EE--SSSEEEEECS-SSEEEEEEESS--SEEEEE
T ss_pred EEC--CCceEeccccCCcccCCccEEc-Cc-EEEEEecCCcEEEE-Ec--CCceEEEecC-CCeEEeeeeeC--cEEEEE
Confidence 999 466665544322 2333 7888 87 444444333 666 43 2443333322 22334566777 555544
Q ss_pred e
Q 018705 250 I 250 (351)
Q Consensus 250 ~ 250 (351)
.
T Consensus 318 ~ 318 (347)
T 2gop_A 318 E 318 (347)
T ss_dssp E
T ss_pred c
Confidence 3
No 300
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=97.26 E-value=0.0035 Score=63.30 Aligned_cols=132 Identities=11% Similarity=-0.037 Sum_probs=79.5
Q ss_pred ceEEEeeCCCeEEEEEcCCEEEEEEcCCCeEEEEeecC-Ccc-----ccceEEcCCCCE-EEEeCC---------CCeEE
Q 018705 55 EDVSVVVSKGALYTATRDGWVKYFILHNETLVNWKHID-SQS-----LLGLTTTKDGGV-ILCDNE---------KGLLK 118 (351)
Q Consensus 55 e~i~~d~~~g~lyv~~~~g~I~~~d~~~g~~~~~~~~~-~~p-----~~gl~~d~~G~L-~v~d~~---------~gl~~ 118 (351)
.++.|.+++..++.+ +|.|+.++..+|+.+...... ... . .+.+++||+. .++... ..++.
T Consensus 20 ~~~~w~~dg~~~~~~--~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~Spdg~~l~~~~~~~~~~r~~~~~~~~~ 96 (740)
T 4a5s_A 20 YSLRWISDHEYLYKQ--ENNILVFNAEYGNSSVFLENSTFDEFGHSIN-DYSISPDGQFILLEYNYVKQWRHSYTASYDI 96 (740)
T ss_dssp CCEEECSSSEEEEEE--TTEEEEEETTTCCEEEEECTTTTTTCCSCCC-EEEECTTSSEEEEEEEEEECSSSCEEEEEEE
T ss_pred cccEECCCCcEEEEc--CCcEEEEECCCCceEEEEechhhhhhccccc-ceEECCCCCEEEEEECCeeeEEEccceEEEE
Confidence 378898654444444 899999999888765443221 111 2 3678999974 333321 12345
Q ss_pred EcC-CC-eEEecCCCCCcccEEEccCCc-EEEEeCCCccCCcccccccccccCCceEEEEeCCCCeEEEeecCc------
Q 018705 119 VTE-EG-VEAIVPDASFTNDVIAASDGT-LYFTVASTKYTPTDFYKDMAEGKPYGQLRKYDPKLKETTVLHEGF------ 189 (351)
Q Consensus 119 ~~~-~g-~~~l~~~~~~~n~l~~d~dG~-ly~t~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~~~~~~~~~~~------ 189 (351)
++. +| .+.+..........+++|||+ |.++.. +.|+.++..+++.+.+....
T Consensus 97 ~d~~~~~~~~l~~~~~~~~~~~~SPdG~~la~~~~-------------------~~i~~~~~~~~~~~~lt~~g~~~~~~ 157 (740)
T 4a5s_A 97 YDLNKRQLITEERIPNNTQWVTWSPVGHKLAYVWN-------------------NDIYVKIEPNLPSYRITWTGKEDIIY 157 (740)
T ss_dssp EETTTTEECCSSCCCTTEEEEEECSSTTCEEEEET-------------------TEEEEESSTTSCCEECCSCCBTTTEE
T ss_pred EECCCCcEEEcccCCCcceeeEECCCCCEEEEEEC-------------------CeEEEEECCCCceEEEcCCCCcccee
Confidence 553 55 444433234567789999994 554422 36888887777655543221
Q ss_pred -------------cccceEEEcCCCCEEEEEe
Q 018705 190 -------------YFANGIALSKNEDFVVVCE 208 (351)
Q Consensus 190 -------------~~~ngi~~~~dg~~lyv~~ 208 (351)
....++++||||+.|.+..
T Consensus 158 ~g~~~~v~~ee~~~~~~~~~wSpDg~~la~~~ 189 (740)
T 4a5s_A 158 NGITDWVYEEEVFSAYSALWWSPNGTFLAYAQ 189 (740)
T ss_dssp ESBCCHHHHHHTSSSSBCEEECTTSSEEEEEE
T ss_pred cCcccccccchhcCCCcceEECCCCCEEEEEE
Confidence 1223588999999777654
No 301
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=97.25 E-value=0.0064 Score=58.00 Aligned_cols=117 Identities=13% Similarity=0.085 Sum_probs=65.7
Q ss_pred EEEEeecCCccccceEEcCCC--CEEEEeCCCCeEEEcCCC-e-----EEe----cCC-----CCCcccEEEccC----C
Q 018705 85 LVNWKHIDSQSLLGLTTTKDG--GVILCDNEKGLLKVTEEG-V-----EAI----VPD-----ASFTNDVIAASD----G 143 (351)
Q Consensus 85 ~~~~~~~~~~p~~gl~~d~~G--~L~v~d~~~gl~~~~~~g-~-----~~l----~~~-----~~~~n~l~~d~d----G 143 (351)
++.+...-..|. +|++.++| +|||++....|+.++++| . ..+ ... ...+-+|+++|+ |
T Consensus 6 v~~va~gL~~P~-~~a~~pdG~~rl~V~er~G~i~~~~~~g~~~~~~~~~~~~~~~~g~~~~~e~Gllgia~~P~f~~n~ 84 (463)
T 2wg3_C 6 IQEVVSGLRQPV-GALHSGDGSQRLFILEKEGYVKILTPEGEIFKEPYLDIHKLVQSGIKGGDERGLLSLAFHPNYKKNG 84 (463)
T ss_dssp EEEEEEEESSEE-EEECCSSSSCCEEEEETTTEEEEECTTSCBCSSCSEECTTTBCCCCSSSCCCSEEEEEECTTHHHHC
T ss_pred EEEeccCCCCce-EEEECCCCCeEEEEEeCCceEEEEeCCCCeeeeeecCCcceeccCccccCCCcceeeEeCCCCcCCC
Confidence 344444446798 99999998 499999876677776544 2 111 111 135677999985 8
Q ss_pred cEEEEeCCCccCCcccccccccccCCceEEEEeCCCC--------eEEEee-----cCccccceEEEcCCCCEEEEEe
Q 018705 144 TLYFTVASTKYTPTDFYKDMAEGKPYGQLRKYDPKLK--------ETTVLH-----EGFYFANGIALSKNEDFVVVCE 208 (351)
Q Consensus 144 ~ly~t~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~~--------~~~~~~-----~~~~~~ngi~~~~dg~~lyv~~ 208 (351)
.||++.+...-....- ......+|.||..+.+ +.+++. ....+...|+|+|||. |||+-
T Consensus 85 ~lYv~yt~~~~~~~~~-----~~~~~~~v~r~~~~~~~~~~~d~~~~~~i~~~~~~~~~H~g~~l~fgpDG~-LYv~~ 156 (463)
T 2wg3_C 85 KLYVSYTTNQERWAIG-----PHDHILRVVEYTVSRKNPHQVDLRTARVFLEVAELHRKHLGGQLLFGPDGF-LYIIL 156 (463)
T ss_dssp EEEEEEEECCCSSCSS-----SSCEEEEEEEEEBCTTCTTSBCGGGCEEEEEEEESSSSSCEEEEEECTTSC-EEEEE
T ss_pred EEEEEEeCCCCCcccC-----CcccceEEEEEEEcCCCCCccCCCCceEEEEcCCCCCcccCCcEeECCCCc-EEEEe
Confidence 8998764210000000 0000125666643211 112222 1224456799999997 99973
No 302
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=97.21 E-value=0.024 Score=56.74 Aligned_cols=139 Identities=9% Similarity=-0.012 Sum_probs=77.9
Q ss_pred CceEEEeeCCCeE-EEEEcC----CEEEEEEcCCCeEEEEeecCC-ccccceEEcCCCC-EEEEeCCCC-----------
Q 018705 54 PEDVSVVVSKGAL-YTATRD----GWVKYFILHNETLVNWKHIDS-QSLLGLTTTKDGG-VILCDNEKG----------- 115 (351)
Q Consensus 54 pe~i~~d~~~g~l-yv~~~~----g~I~~~d~~~g~~~~~~~~~~-~p~~gl~~d~~G~-L~v~d~~~g----------- 115 (351)
-.+++++|++..+ |..... ..|+.+|..+|+......... ... ++++.+||+ |+.+.....
T Consensus 123 ~~~~~~SPDG~~la~~~~~~G~~~~~i~v~dl~tg~~~~~~~~~~~~~~-~~~wspDg~~l~~~~~d~~~~~~~~~~~~~ 201 (695)
T 2bkl_A 123 LGTWAVSWDGKKVAFAQKPNAADEAVLHVIDVDSGEWSKVDVIEGGKYA-TPKWTPDSKGFYYEWLPTDPSIKVDERPGY 201 (695)
T ss_dssp EEEEEECTTSSEEEEEEEETTCSCCEEEEEETTTCCBCSSCCBSCCTTC-CCEECTTSSEEEEEECCCCTTSCGGGGGGG
T ss_pred EEEEEECCCCCEEEEEECCCCCceEEEEEEECCCCCCcCCcccCccccc-ceEEecCCCEEEEEEecCCCCCccccCCCC
Confidence 3467888777665 444433 469999998887641111111 125 889999996 444443222
Q ss_pred --eEEEcC-CC-e--EEecCC-C--CCcccEEEccCCc-EEEEeCCCccCCcccccccccccCCceEEEEeCCCCeEEEe
Q 018705 116 --LLKVTE-EG-V--EAIVPD-A--SFTNDVIAASDGT-LYFTVASTKYTPTDFYKDMAEGKPYGQLRKYDPKLKETTVL 185 (351)
Q Consensus 116 --l~~~~~-~g-~--~~l~~~-~--~~~n~l~~d~dG~-ly~t~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~~~~~~~ 185 (351)
+++.+. ++ . +.+... . ....++.+++||+ |.++.... .....|+.++..+++.+.+
T Consensus 202 ~~v~~~~l~t~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~--------------~~~~~l~~~~~~~~~~~~l 267 (695)
T 2bkl_A 202 TTIRYHTLGTEPSKDTVVHERTGDPTTFLQSDLSRDGKYLFVYILRG--------------WSENDVYWKRPGEKDFRLL 267 (695)
T ss_dssp CEEEEEETTSCGGGCEEEECCCCCTTCEEEEEECTTSCCEEEEEEET--------------TTEEEEEEECTTCSSCEEE
T ss_pred CEEEEEECCCCchhceEEEecCCCCEEEEEEEECCCCCEEEEEEeCC--------------CCceEEEEEcCCCCceEEe
Confidence 666653 33 1 222221 1 3556788999995 55443220 0123688888766666665
Q ss_pred ecCccccceEEEcCCCCEEEEEec
Q 018705 186 HEGFYFANGIALSKNEDFVVVCES 209 (351)
Q Consensus 186 ~~~~~~~ngi~~~~dg~~lyv~~~ 209 (351)
............ ++|+ +|+...
T Consensus 268 ~~~~~~~~~~~~-~~g~-l~~~s~ 289 (695)
T 2bkl_A 268 VKGVGAKYEVHA-WKDR-FYVLTD 289 (695)
T ss_dssp EECSSCCEEEEE-ETTE-EEEEEC
T ss_pred ecCCCceEEEEe-cCCc-EEEEEC
Confidence 544333333444 6777 777544
No 303
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=97.20 E-value=0.098 Score=45.71 Aligned_cols=138 Identities=10% Similarity=0.100 Sum_probs=84.0
Q ss_pred ceEEEeeCCCeEEEEEcCCEEEEEEcCCCeEEEEee---cCCccccceEEcCCCCEEEEeCCCCeEEEcC--CC--eEEe
Q 018705 55 EDVSVVVSKGALYTATRDGWVKYFILHNETLVNWKH---IDSQSLLGLTTTKDGGVILCDNEKGLLKVTE--EG--VEAI 127 (351)
Q Consensus 55 e~i~~d~~~g~lyv~~~~g~I~~~d~~~g~~~~~~~---~~~~p~~gl~~d~~G~L~v~d~~~gl~~~~~--~g--~~~l 127 (351)
..|+|+ .++.|-++. |+.|..||..+|+...... ...... .+++.++|+++++....+.++++. ++ ...+
T Consensus 29 ~~l~WS-~~~~lAvg~-D~tV~iWd~~tg~~~~~~~~~~~~~~V~-~v~~~~~~~~l~sgs~Dg~v~iw~~~~~~~~~~~ 105 (318)
T 4ggc_A 29 NLVDWS-SGNVLAVAL-DNSVYLWSASSGDILQLLQMEQPGEYIS-SVAWIKEGNYLAVGTSSAEVQLWDVQQQKRLRNM 105 (318)
T ss_dssp BCEEEC-TTSEEEEEE-TTEEEEEETTTCCEEEEEECCSTTCCEE-EEEECTTSSEEEEEETTSEEEEEETTTTEEEEEE
T ss_pred eEEEEC-CCCEEEEEe-CCEEEEEECCCCCEEEEEEecCCCCeEE-EEEECCCCCEEEEEECCCcEEEeecCCceeEEEe
Confidence 568998 567666664 8899999998887644322 223355 899999998877766677777773 55 3444
Q ss_pred cCCCCCcccEEEccCCcEEEEeCCCccCCcccccccccccCCceEEEEeCCCCe--EEEeecCccccceEEEcCCCCEEE
Q 018705 128 VPDASFTNDVIAASDGTLYFTVASTKYTPTDFYKDMAEGKPYGQLRKYDPKLKE--TTVLHEGFYFANGIALSKNEDFVV 205 (351)
Q Consensus 128 ~~~~~~~n~l~~d~dG~ly~t~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~~~--~~~~~~~~~~~ngi~~~~dg~~ly 205 (351)
.... ....+++.++.+.++.+. .+.+..++..++. ...+.........++++++++.++
T Consensus 106 ~~h~--~~~~~~~~~~~~l~s~~~-----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 166 (318)
T 4ggc_A 106 TSHS--ARVGSLSWNSYILSSGSR-----------------SGHIHHHDVRVAEHHVATLSGHSQEVCGLRWAPDGRHLA 166 (318)
T ss_dssp ECCS--SCEEEEEEETTEEEEEET-----------------TSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSSEEE
T ss_pred cCcc--ceEEEeecCCCEEEEEec-----------------CCceEeeecCCCceeEEEEcCccCceEEEEEcCCCCEEE
Confidence 3322 222344555555555432 3445555544332 223333344566788899998776
Q ss_pred EEecce--eEE
Q 018705 206 VCESWK--RYW 214 (351)
Q Consensus 206 v~~~~~--~~~ 214 (351)
.+..++ ++|
T Consensus 167 s~~~d~~i~iw 177 (318)
T 4ggc_A 167 SGGNDNLVNVW 177 (318)
T ss_dssp EEETTSCEEEE
T ss_pred EEecCcceeEE
Confidence 666665 555
No 304
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=97.18 E-value=0.1 Score=52.14 Aligned_cols=138 Identities=9% Similarity=0.040 Sum_probs=73.5
Q ss_pred ceEEEeeCCCeE-EEEEcCC----EEEEEEcCCCeEEEEeecCCccccceEEcCCCC-EEEEeCCC-------------C
Q 018705 55 EDVSVVVSKGAL-YTATRDG----WVKYFILHNETLVNWKHIDSQSLLGLTTTKDGG-VILCDNEK-------------G 115 (351)
Q Consensus 55 e~i~~d~~~g~l-yv~~~~g----~I~~~d~~~g~~~~~~~~~~~p~~gl~~d~~G~-L~v~d~~~-------------g 115 (351)
.+++++|++..+ |+....| .|+.+|..+|+..........-. ++++. ||+ |+.+.... .
T Consensus 132 ~~~~~SpDg~~lAy~~~~~G~~~~~i~v~dl~tg~~~~~~~~~~k~~-~~~Ws-Dg~~l~y~~~~~~~~~~~~~~~~~~~ 209 (693)
T 3iuj_A 132 DQLSFSRDGRILAYSLSLAGSDWREIHLMDVESKQPLETPLKDVKFS-GISWL-GNEGFFYSSYDKPDGSELSARTDQHK 209 (693)
T ss_dssp EEEEECTTSSEEEEEEECSSCCEEEEEEEETTTCSEEEEEEEEEESC-CCEEE-TTTEEEEEESSCCC-------CCCCE
T ss_pred EEEEECCCCCEEEEEEecCCCceEEEEEEECCCCCCCccccCCceec-cEEEe-CCCEEEEEEecCcccccccccCCCcE
Confidence 466888766654 5544333 58889998887643322111123 67777 774 65554331 2
Q ss_pred eEEEcC-CC---eEEe-cCCC---CCcccEEEccCCc-EEEEeCCCccCCcccccccccccCCceEEEEeCCCC--eEEE
Q 018705 116 LLKVTE-EG---VEAI-VPDA---SFTNDVIAASDGT-LYFTVASTKYTPTDFYKDMAEGKPYGQLRKYDPKLK--ETTV 184 (351)
Q Consensus 116 l~~~~~-~g---~~~l-~~~~---~~~n~l~~d~dG~-ly~t~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~~--~~~~ 184 (351)
+++.+. ++ -+.+ .... .+..++.+++||+ |+++.... .....|+.+|.+++ +.+.
T Consensus 210 v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~--------------~~~~~i~~~d~~~~~~~~~~ 275 (693)
T 3iuj_A 210 VYFHRLGTAQEDDRLVFGAIPAQHHRYVGATVTEDDRFLLISAANS--------------TSGNRLYVKDLSQENAPLLT 275 (693)
T ss_dssp EEEEETTSCGGGCEEEESCSGGGCCSEEEEEECTTSCEEEEEEESS--------------SSCCEEEEEETTSTTCCCEE
T ss_pred EEEEECCCCcccceEEEecCCCCCeEEEEEEEcCCCCEEEEEEccC--------------CCCcEEEEEECCCCCCceEE
Confidence 555442 22 1222 2211 2345678999995 55554321 11247889886554 4555
Q ss_pred eecCccccceEEEcCCCCEEEEEec
Q 018705 185 LHEGFYFANGIALSKNEDFVVVCES 209 (351)
Q Consensus 185 ~~~~~~~~ngi~~~~dg~~lyv~~~ 209 (351)
+......... .++++|+.+|+...
T Consensus 276 l~~~~~~~~~-~~~~~g~~l~~~t~ 299 (693)
T 3iuj_A 276 VQGDLDADVS-LVDNKGSTLYLLTN 299 (693)
T ss_dssp EECSSSSCEE-EEEEETTEEEEEEC
T ss_pred EeCCCCceEE-EEeccCCEEEEEEC
Confidence 5433322212 26777777877543
No 305
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=97.16 E-value=0.18 Score=50.31 Aligned_cols=179 Identities=14% Similarity=0.099 Sum_probs=95.1
Q ss_pred CceEEEeeCCCeEEEEEcCCE----------------EEEEEcCCCeE---EEEeec--CCccccceEEcCCCC-EEEEe
Q 018705 54 PEDVSVVVSKGALYTATRDGW----------------VKYFILHNETL---VNWKHI--DSQSLLGLTTTKDGG-VILCD 111 (351)
Q Consensus 54 pe~i~~d~~~g~lyv~~~~g~----------------I~~~d~~~g~~---~~~~~~--~~~p~~gl~~d~~G~-L~v~d 111 (351)
..+++|.|++..||.+..++. |++++..+++. ..+... ..... ++.++++|+ |+++.
T Consensus 173 ~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~t~~~~~~~v~~~~~~~~~~~-~~~~SpDg~~l~~~~ 251 (710)
T 2xdw_A 173 FSCMAWTHDGKGMFYNAYPQQDGKSDGTETSTNLHQKLYYHVLGTDQSEDILCAEFPDEPKWMG-GAELSDDGRYVLLSI 251 (710)
T ss_dssp SCCEEECTTSSEEEEEECCCCSSCCSSSCCCCCCCCEEEEEETTSCGGGCEEEECCTTCTTCEE-EEEECTTSCEEEEEE
T ss_pred cceEEEEeCCCEEEEEEECCccccccccccccCCCCEEEEEECCCCcccceEEeccCCCCeEEE-EEEEcCCCCEEEEEE
Confidence 457899987777777665443 99999866642 222221 12245 788999996 43333
Q ss_pred C-----CCCeEEEcC-C------C---eEEecCCCCCcccEEEccCC-cEEEEeCCCccCCcccccccccccCCceEEEE
Q 018705 112 N-----EKGLLKVTE-E------G---VEAIVPDASFTNDVIAASDG-TLYFTVASTKYTPTDFYKDMAEGKPYGQLRKY 175 (351)
Q Consensus 112 ~-----~~gl~~~~~-~------g---~~~l~~~~~~~n~l~~d~dG-~ly~t~~~~~~~~~~~~~~~~~~~~~g~l~~~ 175 (351)
. ...++.++. + + .+.+........ -.++++| .||+.... ..+.+.|+.+
T Consensus 252 ~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~l~~~~~~~~-~~~s~dg~~l~~~s~~--------------~~~~~~l~~~ 316 (710)
T 2xdw_A 252 REGCDPVNRLWYCDLQQESNGITGILKWVKLIDNFEGEY-DYVTNEGTVFTFKTNR--------------HSPNYRLINI 316 (710)
T ss_dssp ECSSSSCCEEEEEEGGGSSSSSCSSCCCEEEECSSSSCE-EEEEEETTEEEEEECT--------------TCTTCEEEEE
T ss_pred EccCCCccEEEEEECcccccccCCccceEEeeCCCCcEE-EEEeccCCEEEEEECC--------------CCCCCEEEEE
Confidence 2 234666652 3 3 344433322222 2467777 57776542 1124679999
Q ss_pred eCCCCe---EEEeecCcc--ccceEEEcCCCCEEEEEecce---eEEeecCCCCc-eeEEeccCCCCCCceEECCCCC-E
Q 018705 176 DPKLKE---TTVLHEGFY--FANGIALSKNEDFVVVCESWK---RYWLKGDRAGI-LDAFIENLPGGPDNINLAPDGS-F 245 (351)
Q Consensus 176 d~~~~~---~~~~~~~~~--~~ngi~~~~dg~~lyv~~~~~---~~~i~~~~~~~-~~~~~~~~~g~pd~i~~d~~G~-l 245 (351)
|.++++ .+.+..... ...++++++++. ++++.... ++++-+...++ .+.+... .+...++..+++|. +
T Consensus 317 d~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~-lv~~~~~~g~~~l~~~~~~~g~~~~~l~~~-~~~v~~~~~s~d~~~l 394 (710)
T 2xdw_A 317 DFTDPEESKWKVLVPEHEKDVLEWVACVRSNF-LVLCYLHDVKNTLQLHDLATGALLKIFPLE-VGSVVGYSGQKKDTEI 394 (710)
T ss_dssp ETTSCCGGGCEEEECCCSSCEEEEEEEETTTE-EEEEEEETTEEEEEEEETTTCCEEEEECCC-SSEEEEEECCTTCSEE
T ss_pred eCCCCCcccceeccCCCCCCeEEEEEEEcCCE-EEEEEEECCEEEEEEEECCCCCEEEecCCC-CceEEEEecCCCCCEE
Confidence 987653 234433222 456788885554 66654322 56654432333 2222211 22223455667774 6
Q ss_pred EEEEe
Q 018705 246 WIGLI 250 (351)
Q Consensus 246 wva~~ 250 (351)
+++..
T Consensus 395 ~~~~s 399 (710)
T 2xdw_A 395 FYQFT 399 (710)
T ss_dssp EEEEE
T ss_pred EEEEe
Confidence 66544
No 306
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=97.14 E-value=0.13 Score=46.93 Aligned_cols=130 Identities=11% Similarity=0.155 Sum_probs=74.5
Q ss_pred eEEEE-EcCCEEEEEEcCCCeEEEEeecCCccccceEEcCC----C----CEEEEeCC--C---CeEEEcC-CC-eEEec
Q 018705 65 ALYTA-TRDGWVKYFILHNETLVNWKHIDSQSLLGLTTTKD----G----GVILCDNE--K---GLLKVTE-EG-VEAIV 128 (351)
Q Consensus 65 ~lyv~-~~~g~I~~~d~~~g~~~~~~~~~~~p~~gl~~d~~----G----~L~v~d~~--~---gl~~~~~-~g-~~~l~ 128 (351)
.++++ ...++++.+|. +|+...... .++++ ++.+-++ | .+++++.. . .++.+++ ++ ++.+.
T Consensus 41 s~ii~t~k~~gL~Vydl-~G~~l~~~~-~g~~n-nVD~r~~~~l~g~~~dla~as~R~~~~n~l~vf~iDp~~~~l~~i~ 117 (355)
T 3amr_A 41 SKLITTNKKSGLVVYSL-DGKMLHSYN-TGKLN-NVDIRYDFPLNGKKVDIAAASNRSEGKNTIEIYAIDGKNGTLQSMT 117 (355)
T ss_dssp CEEEEEETTTEEEEEET-TSCEEEEEC-CSCEE-EEEEEEEEEETTEEEEEEEEEECSTTCCEEEEEEECTTTCCEEECS
T ss_pred cEEEEEcCCCCEEEEcC-CCcEEEEcc-CCCcc-cEEEecccccCCceEeEEEEeCCCCCCCeEEEEEECCCCCceeecc
Confidence 34554 45778999999 665544332 25666 6555431 2 24666654 3 2455564 45 65553
Q ss_pred C-------CCCCcccEEE--ccC-Cc--EEEEeCCCccCCcccccccccccCCceEEEEeC---CCCeEE----EeecCc
Q 018705 129 P-------DASFTNDVIA--ASD-GT--LYFTVASTKYTPTDFYKDMAEGKPYGQLRKYDP---KLKETT----VLHEGF 189 (351)
Q Consensus 129 ~-------~~~~~n~l~~--d~d-G~--ly~t~~~~~~~~~~~~~~~~~~~~~g~l~~~d~---~~~~~~----~~~~~~ 189 (351)
. ....|+++|. +++ |. +|+++.. |++..|.. ..++++ .-..-.
T Consensus 118 ~~~~pv~t~~~~pyGlcly~~~~~g~~yafV~~k~------------------G~~~q~~l~~~~~g~~~~~lVR~f~lg 179 (355)
T 3amr_A 118 DPDHPIATAINEVYGFTLYHSQKTGKYYAMVTGKE------------------GEFEQYELKADKNGYISGKKVRAFKMN 179 (355)
T ss_dssp CTTSCEECCCSSCCCEEEEECTTTCCEEEEEECSS------------------SEEEEEEEEECTTSCEEEEEEEEEECS
T ss_pred ccccCcCCCCCCeeEEEEEecCCCCcEEEEEECCC------------------CeEEEEEEEeCCCCcccceEEEEecCC
Confidence 2 2268999999 774 54 5555432 45544322 223221 111223
Q ss_pred cccceEEEcCCCCEEEEEecceeEEe
Q 018705 190 YFANGIALSKNEDFVVVCESWKRYWL 215 (351)
Q Consensus 190 ~~~ngi~~~~dg~~lyv~~~~~~~~i 215 (351)
..+.|++++++...||+++...-+|.
T Consensus 180 sq~EgcvvDd~~g~Lyv~eEd~GIw~ 205 (355)
T 3amr_A 180 SQTEGMAADDEYGRLYIAEEDEAIWK 205 (355)
T ss_dssp SCEEEEEEETTTTEEEEEETTTEEEE
T ss_pred CCcceEEEcCCCCeEEEecccceEEE
Confidence 46889999998889999998764454
No 307
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=97.13 E-value=0.088 Score=48.50 Aligned_cols=99 Identities=18% Similarity=0.128 Sum_probs=63.1
Q ss_pred eEEEEEcCCEEEEEEcCCCeEEEEe------ecCCccccceEEcC--------CCCEEEEeCCCCeEEEcC--CC--eEE
Q 018705 65 ALYTATRDGWVKYFILHNETLVNWK------HIDSQSLLGLTTTK--------DGGVILCDNEKGLLKVTE--EG--VEA 126 (351)
Q Consensus 65 ~lyv~~~~g~I~~~d~~~g~~~~~~------~~~~~p~~gl~~d~--------~G~L~v~d~~~gl~~~~~--~g--~~~ 126 (351)
.+..+..|+.|..||.++++..... ...+..+ .+++.+ +|+++++-...+.++++. ++ ...
T Consensus 103 ~las~~~d~~v~lw~~~~~~~~~~~~~~~~~gH~~~v~-~v~~~p~~~~~~~~d~~~las~s~D~tv~~Wd~~~~~~~~~ 181 (393)
T 4gq1_A 103 FLACVCQDNTVRLIITKNETIITQHVLGGKSGHHNFVN-DIDIADVYSADNRLAEQVIASVGDDCTLIIWRLTDEGPILA 181 (393)
T ss_dssp EEEEEETTSCEEEEEEETTEEEEEEEECTTTSCSSCEE-EEEEEEEECTTCSEEEEEEEEEETTSEEEEEEEETTEEEEE
T ss_pred EEEEEeCCCcEEEEECCCCccceeeeecccCCCCCceE-EEEEccccccccCCCCCEEEEEECCCeEEEEECCCCceeee
Confidence 4556778999999988777543321 1123456 888875 788888777778888873 44 333
Q ss_pred ecCCCCCcccEEEccCC-cEEEEeCCCccCCcccccccccccCCceEEEEeCCCCe
Q 018705 127 IVPDASFTNDVIAASDG-TLYFTVASTKYTPTDFYKDMAEGKPYGQLRKYDPKLKE 181 (351)
Q Consensus 127 l~~~~~~~n~l~~d~dG-~ly~t~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~~~ 181 (351)
+......+.++++.|++ ++.++.+. ++.|..||..+++
T Consensus 182 ~~~~~~~v~~v~~~p~~~~~l~~~~~-----------------d~~v~~wd~~t~~ 220 (393)
T 4gq1_A 182 GYPLSSPGISVQFRPSNPNQLIVGER-----------------NGNIRIFDWTLNL 220 (393)
T ss_dssp EEECSSCEEEEEEETTEEEEEEEEET-----------------TSEEEEEETTCCC
T ss_pred ecCCCCCcEEEEECCCCCceEEecCC-----------------CCEEEEEECCCCc
Confidence 32222567789999987 45555433 4567777766544
No 308
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=97.07 E-value=0.26 Score=48.23 Aligned_cols=44 Identities=20% Similarity=0.227 Sum_probs=30.3
Q ss_pred CCceEEEEEECCCCeEEEEEECCCCCcccceeEEEEECCEEEEEec
Q 018705 286 DAGARVVKVDGNDGKIIRDFNDPDATYISFVTSAAEFDGNLYLASL 331 (351)
Q Consensus 286 ~~~~~v~~~~~~~g~~~~~~~~~~g~~~~~~~~~~~~~g~L~ig~~ 331 (351)
...+.+..||.++|+++-.+..+.+..... .....+|++|++..
T Consensus 504 ~~dg~l~A~D~~tG~~lW~~~~~~g~~a~P--~~y~~~G~qYv~~~ 547 (582)
T 1flg_A 504 TGDGYFKAFDAKSGKELWKFQTGSGIVSPP--ITWEQDGEQYLGVT 547 (582)
T ss_dssp CTTSEEEEEETTTCCEEEEEECSSCCCSCC--EEEEETTEEEEEEE
T ss_pred CCCCcEEEEECCCCCEEEEecCCCCcccCc--eEEEECCEEEEEEE
Confidence 345678999987999999988766532211 22347899999854
No 309
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=97.04 E-value=0.0031 Score=59.65 Aligned_cols=134 Identities=13% Similarity=0.090 Sum_probs=81.2
Q ss_pred CCceEEEeeCCCeEEE----EEcCCEEEEEEcCCC--------e----EEEEeecCCccccceEEcCC-CCEEEEeCCCC
Q 018705 53 HPEDVSVVVSKGALYT----ATRDGWVKYFILHNE--------T----LVNWKHIDSQSLLGLTTTKD-GGVILCDNEKG 115 (351)
Q Consensus 53 ~pe~i~~d~~~g~lyv----~~~~g~I~~~d~~~g--------~----~~~~~~~~~~p~~gl~~d~~-G~L~v~d~~~g 115 (351)
...+++|++++..|++ +..++.|..||..++ + ...+......+. ++++.++ ++++++....+
T Consensus 94 ~v~~l~~spdg~~lav~~~sgs~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~-~v~~~p~~~~~las~s~Dg 172 (434)
T 2oit_A 94 PIHHLALSCDNLTLSACMMSSEYGSIIAFFDVRTFSNEAKQQKRPFAYHKLLKDAGGMVI-DMKWNPTVPSMVAVCLADG 172 (434)
T ss_dssp CEEEEEECTTSCEEEEEEEETTTEEEEEEEEHHHHHCTTCSSCCCSEEEECCCSGGGSEE-EEEECSSCTTEEEEEETTS
T ss_pred cccEEEEcCCCCEEEEEEeccCCCceEEEEEccccccCCcCCcceeeeeeccCCCCCceE-EEEECCCCCCEEEEEECCC
Confidence 3678999977777774 455888999986433 1 111111234566 8999987 67776555556
Q ss_pred eEEEc--CCC-e-EEecCCCCCcccEEEccCCcEEEEeCCCccCCcccccccccccCCceEEEEeCCCCeEEEeecCc--
Q 018705 116 LLKVT--EEG-V-EAIVPDASFTNDVIAASDGTLYFTVASTKYTPTDFYKDMAEGKPYGQLRKYDPKLKETTVLHEGF-- 189 (351)
Q Consensus 116 l~~~~--~~g-~-~~l~~~~~~~n~l~~d~dG~ly~t~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~~~~~~~~~~~-- 189 (351)
.++++ +++ . .........+.+++++++|...++.+. +|.|..||........+....
T Consensus 173 ~v~iwD~~~~~~~~~~~~~~~~v~~v~wspdg~~lasgs~-----------------dg~v~iwd~~~~~~~~~~~~~~~ 235 (434)
T 2oit_A 173 SIAVLQVTETVKVCATLPSTVAVTSVCWSPKGKQLAVGKQ-----------------NGTVVQYLPTLQEKKVIPCPPFY 235 (434)
T ss_dssp CEEEEEESSSEEEEEEECGGGCEEEEEECTTSSCEEEEET-----------------TSCEEEECTTCCEEEEECCCTTC
T ss_pred eEEEEEcCCCcceeeccCCCCceeEEEEcCCCCEEEEEcC-----------------CCcEEEEccCCcccccccCCccc
Confidence 66665 344 2 222222257889999999965555433 467999998732232222111
Q ss_pred -----cccceEEEcCCCCEE
Q 018705 190 -----YFANGIALSKNEDFV 204 (351)
Q Consensus 190 -----~~~ngi~~~~dg~~l 204 (351)
.....+++++++.++
T Consensus 236 ~~~~~~~v~~v~w~~~~~~l 255 (434)
T 2oit_A 236 ESDHPVRVLDVLWIGTYVFA 255 (434)
T ss_dssp CTTSCEEEEEEEEEETTEEE
T ss_pred CCCCceeEEEEEEecCceEE
Confidence 134568888877543
No 310
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=97.04 E-value=0.042 Score=54.89 Aligned_cols=84 Identities=14% Similarity=0.070 Sum_probs=45.0
Q ss_pred CceEEEEeCCCCeEEEeecCccccceEEEcCCCCEEEEEecceeEEeecCCCCcee-EEeccCCCCCCceEECCCCCEEE
Q 018705 169 YGQLRKYDPKLKETTVLHEGFYFANGIALSKNEDFVVVCESWKRYWLKGDRAGILD-AFIENLPGGPDNINLAPDGSFWI 247 (351)
Q Consensus 169 ~g~l~~~d~~~~~~~~~~~~~~~~ngi~~~~dg~~lyv~~~~~~~~i~~~~~~~~~-~~~~~~~g~pd~i~~d~~G~lwv 247 (351)
.|.|+-+|+.+|+..-.........+..+...+..+|+++..+.+..-+...++.. .+.........-+....+|++|+
T Consensus 437 ~g~l~A~D~~tG~~~W~~~~~~~~~~~~~~t~gg~vf~g~~dg~l~a~d~~tG~~l~~~~~~~~~~~~p~~~~~~G~~yv 516 (668)
T 1kv9_A 437 SGALLAWDPVKQKAAWKVPYPTHWNGGTLSTAGNLVFQGTAAGQMHAYSADKGEALWQFEAQSGIVAAPMTFELAGRQYV 516 (668)
T ss_dssp EEEEEEEETTTTEEEEEEEESSSCCCCEEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEETTEEEE
T ss_pred cceEEEEeCCCCcEEEEccCCCCCcCceeEeCCCEEEEECCcccchhhhhhcChhheEecCCCCcccCceEEEECCEEEE
Confidence 37899999999987543322223344455556667888866553333223334421 12111111112234446799999
Q ss_pred EEecC
Q 018705 248 GLIKM 252 (351)
Q Consensus 248 a~~~~ 252 (351)
+...+
T Consensus 517 a~~~G 521 (668)
T 1kv9_A 517 AIMAG 521 (668)
T ss_dssp EEEEC
T ss_pred EEEec
Confidence 87653
No 311
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=96.93 E-value=0.39 Score=48.01 Aligned_cols=58 Identities=17% Similarity=0.275 Sum_probs=39.2
Q ss_pred CCceEEEEEECCCCeEEEEEECCCCCcccceeEEEEECCEEEEEecCC---------------------CeEEEEeCCCC
Q 018705 286 DAGARVVKVDGNDGKIIRDFNDPDATYISFVTSAAEFDGNLYLASLQS---------------------NFIGILPLDGP 344 (351)
Q Consensus 286 ~~~~~v~~~~~~~g~~~~~~~~~~g~~~~~~~~~~~~~g~L~ig~~~~---------------------~~i~~~~~~~~ 344 (351)
...+.+..||.++|+++-.+..+.+.....+ ....+|+.|++...+ ..+..|.+++.
T Consensus 493 t~dg~l~a~D~~tG~~lw~~~~~~~~~~~p~--ty~~~G~qyv~~~~G~gg~~~~~~~~~~~~~~~~~g~~~~~f~l~~~ 570 (689)
T 1yiq_A 493 SADGRVIAYAADTGEKLWEQPAASGVMAAPV--TYSVDGEQYVTFMAGWGGAFSTFAGALSLRAGVQPYAQVLTYKLGGT 570 (689)
T ss_dssp CTTSEEEEEETTTCCEEEEEECSSCCCSCCE--EEEETTEEEEEEEECCCTTHHHHTHHHHGGGCCCCCCEEEEEEETCC
T ss_pred CCCCcEEEEECCCCccceeeeCCCCcccCce--EEEECCEEEEEEEecCCccccccccccccccccCCCceEEEeecCCc
Confidence 4456789999878999988887655322222 225789999886522 47788887764
Q ss_pred C
Q 018705 345 E 345 (351)
Q Consensus 345 ~ 345 (351)
+
T Consensus 571 ~ 571 (689)
T 1yiq_A 571 A 571 (689)
T ss_dssp C
T ss_pred c
Confidence 3
No 312
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=96.77 E-value=0.12 Score=51.88 Aligned_cols=83 Identities=16% Similarity=0.083 Sum_probs=46.6
Q ss_pred ceEEEEeCCCCeEEEeecCccccceEEEcCCCCEEEEEecceeEEeecCCCCcee-EEeccCCCCCCceEECCCCCEEEE
Q 018705 170 GQLRKYDPKLKETTVLHEGFYFANGIALSKNEDFVVVCESWKRYWLKGDRAGILD-AFIENLPGGPDNINLAPDGSFWIG 248 (351)
Q Consensus 170 g~l~~~d~~~~~~~~~~~~~~~~ngi~~~~dg~~lyv~~~~~~~~i~~~~~~~~~-~~~~~~~g~pd~i~~d~~G~lwva 248 (351)
|.|.-+|++||+...........++-.++..+..+|+++.++.+..-+...|+.. .+.........-+.+..+|+.||+
T Consensus 455 g~l~A~D~~tG~~~W~~~~~~~~~~g~~~tagglvf~gt~dg~l~a~D~~tG~~lw~~~~~~~~~~~p~ty~~~G~qyv~ 534 (689)
T 1yiq_A 455 GKLIAWDPVKQQAAWEVPYVTIFNGGTLSTAGNLVFEGSADGRVIAYAADTGEKLWEQPAASGVMAAPVTYSVDGEQYVT 534 (689)
T ss_dssp EEEEEEETTTTEEEEEEEESSSCCCCEEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEETTEEEEE
T ss_pred eeEEEEECCCCCeEeEccCCCCccCccceECCCEEEEECCCCcEEEEECCCCccceeeeCCCCcccCceEEEECCEEEEE
Confidence 7899999999987543322222233355566667888766664444444445432 221111111122555678999999
Q ss_pred EecC
Q 018705 249 LIKM 252 (351)
Q Consensus 249 ~~~~ 252 (351)
...+
T Consensus 535 ~~~G 538 (689)
T 1yiq_A 535 FMAG 538 (689)
T ss_dssp EEEC
T ss_pred EEec
Confidence 7654
No 313
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=96.76 E-value=0.12 Score=47.06 Aligned_cols=140 Identities=13% Similarity=0.007 Sum_probs=74.3
Q ss_pred eEEEee---CCCeEEEEEcCCEEEEEEcCCCeE-EEEeecCC---ccccceEEcCCCCEEEEeCC------------CCe
Q 018705 56 DVSVVV---SKGALYTATRDGWVKYFILHNETL-VNWKHIDS---QSLLGLTTTKDGGVILCDNE------------KGL 116 (351)
Q Consensus 56 ~i~~d~---~~g~lyv~~~~g~I~~~d~~~g~~-~~~~~~~~---~p~~gl~~d~~G~L~v~d~~------------~gl 116 (351)
.+++.+ ++..+..+..|+.|..||.++|+. ..+..... ... .++|.++|.+.++... .+.
T Consensus 183 ~l~fs~~~g~~~~LaSgS~D~TIkIWDl~TGk~l~tL~g~~~~v~~v~-~vafSpdG~~lvs~s~~~~~w~laSGs~D~t 261 (356)
T 2w18_A 183 ILTFAEVQGMQEALLGTTIMNNIVIWNLKTGQLLKKMHIDDSYQASVC-HKAYSEMGLLFIVLSHPCAKESESLRSPVFQ 261 (356)
T ss_dssp EEEEEEEETSTTEEEEEETTSEEEEEETTTCCEEEEEECCC---CCCE-EEEEEETTEEEEEEC------------CCEE
T ss_pred eEEeeccCCCCceEEEecCCCcEEEEECCCCcEEEEEcCCCcceeeeE-EEEECCCCCEEEEeccCCCcceeeccCCCcE
Confidence 445554 334555678899999999988875 44432111 223 4578999987654321 123
Q ss_pred EEEc-C-CC--eEEec----CCCCCcccEEEccCCcEEEEeCCCccCCcccccccccccCCceEEEEeCCCCeEEEeecC
Q 018705 117 LKVT-E-EG--VEAIV----PDASFTNDVIAASDGTLYFTVASTKYTPTDFYKDMAEGKPYGQLRKYDPKLKETTVLHEG 188 (351)
Q Consensus 117 ~~~~-~-~g--~~~l~----~~~~~~n~l~~d~dG~ly~t~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~~~~~~~~~~ 188 (351)
+++. . +| +.++. ++ ..-+-+..+.+|.+.++- ..++.|..||..+++......+
T Consensus 262 IklWd~~tgk~l~v~~~~~p~G-h~~~~lsg~~sg~~lASg-----------------S~DgTIkIWDl~tGk~l~tL~g 323 (356)
T 2w18_A 262 LIVINPKTTLSVGVMLYCLPPG-QAGRFLEGDVKDHCAAAI-----------------LTSGTIAIWDLLLGQCTALLPP 323 (356)
T ss_dssp EEEEETTTTEEEEEEEECCCTT-CCCCEEEEEEETTEEEEE-----------------ETTSCEEEEETTTCSEEEEECC
T ss_pred EEEEECCCCEEEEEEEeeccCC-CcceeEccccCCCEEEEE-----------------cCCCcEEEEECCCCcEEEEecC
Confidence 3333 2 33 22211 00 000001111122233332 2256799999998876544432
Q ss_pred -ccccc-eEEEcCCCCEEEEEecce--eEE
Q 018705 189 -FYFAN-GIALSKNEDFVVVCESWK--RYW 214 (351)
Q Consensus 189 -~~~~n-gi~~~~dg~~lyv~~~~~--~~~ 214 (351)
...+. .++|+|||++|+-+..++ ++|
T Consensus 324 H~~~vvs~vafSPDG~~LaSGS~D~TIklW 353 (356)
T 2w18_A 324 VSDQHWSFVKWSGTDSHLLAGQKDGNIFVY 353 (356)
T ss_dssp C--CCCCEEEECSSSSEEEEECTTSCEEEE
T ss_pred CCCCeEEEEEECCCCCEEEEEECCCcEEEe
Confidence 22334 489999999777666665 565
No 314
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=96.52 E-value=0.27 Score=48.20 Aligned_cols=83 Identities=16% Similarity=0.087 Sum_probs=43.5
Q ss_pred CceEEEEeCCCCeEEEeecCccccceEEEcCCCCEEEEEecceeEEeecCCCCceeEEeccCCC--CCCceEECCCCCEE
Q 018705 169 YGQLRKYDPKLKETTVLHEGFYFANGIALSKNEDFVVVCESWKRYWLKGDRAGILDAFIENLPG--GPDNINLAPDGSFW 246 (351)
Q Consensus 169 ~g~l~~~d~~~~~~~~~~~~~~~~ngi~~~~dg~~lyv~~~~~~~~i~~~~~~~~~~~~~~~~g--~pd~i~~d~~G~lw 246 (351)
.|.|+-+|+.+|+..--.......++-.+.-.+..+|+++.++.+..-+...|+..--. .+++ ...-+....+|++|
T Consensus 465 ~G~l~A~D~~tG~~~W~~~~~~~~~~g~~~tagglvf~g~~dg~l~A~D~~tG~~lW~~-~~~~g~~a~P~~y~~~G~qY 543 (582)
T 1flg_A 465 VGSLRAMDPVSGKVVWEHKEHLPLWAGVLATAGNLVFTGTGDGYFKAFDAKSGKELWKF-QTGSGIVSPPITWEQDGEQY 543 (582)
T ss_dssp SEEEEEECTTTCCEEEEEEESSCCCSCCEEETTTEEEEECTTSEEEEEETTTCCEEEEE-ECSSCCCSCCEEEEETTEEE
T ss_pred cceEEEEECCCCCEEEEecCCCCCcccceEeCCCEEEEECCCCcEEEEECCCCCEEEEe-cCCCCcccCceEEEECCEEE
Confidence 57899999999886532221111222222233456888776664333333344432111 1221 11225556789999
Q ss_pred EEEecC
Q 018705 247 IGLIKM 252 (351)
Q Consensus 247 va~~~~ 252 (351)
|+...+
T Consensus 544 v~~~~G 549 (582)
T 1flg_A 544 LGVTVG 549 (582)
T ss_dssp EEEEEC
T ss_pred EEEEcc
Confidence 998654
No 315
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=96.44 E-value=0.53 Score=43.11 Aligned_cols=66 Identities=9% Similarity=0.179 Sum_probs=43.3
Q ss_pred CceEEEee--------CCCeEEEEEcCCEEEEEEcCCCeE-EEEeecCCccccceEEcCCC-CEEEEeCCCCeEEEc
Q 018705 54 PEDVSVVV--------SKGALYTATRDGWVKYFILHNETL-VNWKHIDSQSLLGLTTTKDG-GVILCDNEKGLLKVT 120 (351)
Q Consensus 54 pe~i~~d~--------~~g~lyv~~~~g~I~~~d~~~g~~-~~~~~~~~~p~~gl~~d~~G-~L~v~d~~~gl~~~~ 120 (351)
-.+++|.| ++..|..+..|+.|..||..++.. ........... .+++.+++ +++++....+.+++.
T Consensus 139 v~~v~~~p~~~~~~~~d~~~las~s~D~tv~~Wd~~~~~~~~~~~~~~~~v~-~v~~~p~~~~~l~~~~~d~~v~~w 214 (393)
T 4gq1_A 139 VNDIDIADVYSADNRLAEQVIASVGDDCTLIIWRLTDEGPILAGYPLSSPGI-SVQFRPSNPNQLIVGERNGNIRIF 214 (393)
T ss_dssp EEEEEEEEEECTTCSEEEEEEEEEETTSEEEEEEEETTEEEEEEEECSSCEE-EEEEETTEEEEEEEEETTSEEEEE
T ss_pred eEEEEEccccccccCCCCCEEEEEECCCeEEEEECCCCceeeeecCCCCCcE-EEEECCCCCceEEecCCCCEEEEE
Confidence 45788875 345667788899999999755543 33333344556 89999887 455554455666665
No 316
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=96.42 E-value=0.81 Score=44.92 Aligned_cols=112 Identities=17% Similarity=0.157 Sum_probs=66.9
Q ss_pred eEEEeeCCCeEEEEEc-CCEEEEEEc-CCCeEEEEeecCC-----------c-cccceEEc-CCCC----EEEEeCCCCe
Q 018705 56 DVSVVVSKGALYTATR-DGWVKYFIL-HNETLVNWKHIDS-----------Q-SLLGLTTT-KDGG----VILCDNEKGL 116 (351)
Q Consensus 56 ~i~~d~~~g~lyv~~~-~g~I~~~d~-~~g~~~~~~~~~~-----------~-p~~gl~~d-~~G~----L~v~d~~~gl 116 (351)
..++. ++.+|+.+. ++.|+.+|. ++|+..--..... . .. ++++. .+|. +|++.....+
T Consensus 57 tP~v~--~g~vyv~~~~~~~v~AlD~~~tG~~lW~~~~~~~~~~~~~~~~~~~~~-g~av~p~~g~~~~rV~v~t~dg~l 133 (599)
T 1w6s_A 57 APLVV--DGKMYIHTSFPNNTFALGLDDPGTILWQDKPKQNPAARAVACCDLVNR-GLAYWPGDGKTPALILKTQLDGNV 133 (599)
T ss_dssp CCEEE--TTEEEEECSTTTCEEEEETTCTTSEEEEECCCCCGGGGGGCSSCSCCC-CCEEECCCSSSCCEEEEECTTSEE
T ss_pred ccEEE--CCEEEEEeCCCCEEEEEeCCCCCcEEEEECCCCCcccccccccccccc-ceEEEecCCcceeEEEEEcCCCEE
Confidence 34554 789999998 899999999 8897631111111 1 13 66774 2456 9999877789
Q ss_pred EEEcC-CCeEEec--CCC-----CCcccEEEccCCcEEEEeCCCccCCcccccccccccCCceEEEEeCCCCeEE
Q 018705 117 LKVTE-EGVEAIV--PDA-----SFTNDVIAASDGTLYFTVASTKYTPTDFYKDMAEGKPYGQLRKYDPKLKETT 183 (351)
Q Consensus 117 ~~~~~-~g~~~l~--~~~-----~~~n~l~~d~dG~ly~t~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~~~~~ 183 (351)
+.++. +|..... ... .....-++ .+|.+|+......+ ...|.|+-||.++|+..
T Consensus 134 ~AlDa~TG~~~W~~~~~~~~~~~~~~ssP~v-~~g~V~vg~~g~e~------------g~~g~v~A~D~~TG~~~ 195 (599)
T 1w6s_A 134 AALNAETGETVWKVENSDIKVGSTLTIAPYV-VKDKVIIGSSGAEL------------GVRGYLTAYDVKTGEQV 195 (599)
T ss_dssp EEEETTTCCEEEEEECCCGGGTCBCCSCCEE-ETTEEEECCBCGGG------------TCCCEEEEEETTTCCEE
T ss_pred EEEECCCCCEEEeecCCCCCccceeecCCEE-ECCEEEEEeccccc------------CCCCeEEEEECCCCcEE
Confidence 99995 7722221 110 01111122 25788887643111 12467888998888764
No 317
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=96.36 E-value=0.94 Score=45.08 Aligned_cols=178 Identities=13% Similarity=0.133 Sum_probs=89.2
Q ss_pred ceEEEeeCCCeEEEEEcC-------------CEEEEEEcCCCe---EEEEeecC---CccccceEEcCCCC-EEEEeCC-
Q 018705 55 EDVSVVVSKGALYTATRD-------------GWVKYFILHNET---LVNWKHID---SQSLLGLTTTKDGG-VILCDNE- 113 (351)
Q Consensus 55 e~i~~d~~~g~lyv~~~~-------------g~I~~~d~~~g~---~~~~~~~~---~~p~~gl~~d~~G~-L~v~d~~- 113 (351)
.+++|. ++..||....+ .+|++++..++. ...+.... ..-. ++.++++|+ |++....
T Consensus 178 ~~~~Ws-Dg~~l~y~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~-~~~~SpDg~~l~~~~~~~ 255 (693)
T 3iuj_A 178 SGISWL-GNEGFFYSSYDKPDGSELSARTDQHKVYFHRLGTAQEDDRLVFGAIPAQHHRYV-GATVTEDDRFLLISAANS 255 (693)
T ss_dssp CCCEEE-TTTEEEEEESSCCC-------CCCCEEEEEETTSCGGGCEEEESCSGGGCCSEE-EEEECTTSCEEEEEEESS
T ss_pred ccEEEe-CCCEEEEEEecCcccccccccCCCcEEEEEECCCCcccceEEEecCCCCCeEEE-EEEEcCCCCEEEEEEccC
Confidence 356777 67767665544 348888865543 22332221 1234 778899997 4343221
Q ss_pred ---CCeEEEcC---CC-eEEecCCCCCcccEEEccCC-cEEEEeCCCccCCcccccccccccCCceEEEEeCCCCeE---
Q 018705 114 ---KGLLKVTE---EG-VEAIVPDASFTNDVIAASDG-TLYFTVASTKYTPTDFYKDMAEGKPYGQLRKYDPKLKET--- 182 (351)
Q Consensus 114 ---~gl~~~~~---~g-~~~l~~~~~~~n~l~~d~dG-~ly~t~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~~~~--- 182 (351)
..++.++. ++ .+.+.......... ++++| .|||..... .+.++|+.+|.++++.
T Consensus 256 ~~~~~i~~~d~~~~~~~~~~l~~~~~~~~~~-~~~~g~~l~~~t~~~--------------~~~~~l~~~d~~~~~~~~~ 320 (693)
T 3iuj_A 256 TSGNRLYVKDLSQENAPLLTVQGDLDADVSL-VDNKGSTLYLLTNRD--------------APNRRLVTVDAANPGPAHW 320 (693)
T ss_dssp SSCCEEEEEETTSTTCCCEEEECSSSSCEEE-EEEETTEEEEEECTT--------------CTTCEEEEEETTSCCGGGC
T ss_pred CCCcEEEEEECCCCCCceEEEeCCCCceEEE-EeccCCEEEEEECCC--------------CCCCEEEEEeCCCCCcccc
Confidence 24666662 33 45554432222222 55554 677765431 1246899999876543
Q ss_pred EEeecCccccceEEEcCCCCEEEEEecce---eEEeecCCCCceeEEeccCCCCCCceEECCCC-CEEEEEec
Q 018705 183 TVLHEGFYFANGIALSKNEDFVVVCESWK---RYWLKGDRAGILDAFIENLPGGPDNINLAPDG-SFWIGLIK 251 (351)
Q Consensus 183 ~~~~~~~~~~ngi~~~~dg~~lyv~~~~~---~~~i~~~~~~~~~~~~~~~~g~pd~i~~d~~G-~lwva~~~ 251 (351)
+.+...-.. -+.++++++.|+++...+ ++++-+...+..+.+.-...+...++..++++ .++++...
T Consensus 321 ~~l~~~~~~--~~~~s~~g~~lv~~~~~~g~~~l~~~d~~g~~~~~l~~p~~~~~~~~~~~~d~~~l~~~~ss 391 (693)
T 3iuj_A 321 RDLIPERQQ--VLTVHSGSGYLFAEYMVDATARVEQFDYEGKRVREVALPGLGSVSGFNGKHDDPALYFGFEN 391 (693)
T ss_dssp EEEECCCSS--CEEEEEETTEEEEEEEETTEEEEEEECTTSCEEEEECCSSSSEEEECCCCTTCSCEEEEEEC
T ss_pred EEEecCCCC--EEEEEEECCEEEEEEEECCeeEEEEEECCCCeeEEeecCCCceEEeeecCCCCCEEEEEecC
Confidence 443322211 127888888777765433 55554433222222211111111233445555 47776543
No 318
>3zwu_A Alkaline phosphatase PHOX; hydrolase, beta-propeller, iron; 1.39A {Pseudomonas fluorescens}
Probab=96.08 E-value=0.059 Score=52.78 Aligned_cols=120 Identities=15% Similarity=0.293 Sum_probs=72.8
Q ss_pred CCcccEEEcc-CCcEEEEeCCCccCCcc-c-cc--ccccccCCceEEEEeCCCCe-------EEEee-------------
Q 018705 132 SFTNDVIAAS-DGTLYFTVASTKYTPTD-F-YK--DMAEGKPYGQLRKYDPKLKE-------TTVLH------------- 186 (351)
Q Consensus 132 ~~~n~l~~d~-dG~ly~t~~~~~~~~~~-~-~~--~~~~~~~~g~l~~~d~~~~~-------~~~~~------------- 186 (351)
.+|.++.+++ +|.+||+.+...-.... . .. .-......|.|++|+++.++ ...+.
T Consensus 384 ~RpEgi~~~p~~g~vY~a~Tn~~~rg~~~~~~~~~np~~~n~~G~I~r~~~~~~d~~a~~f~w~~~v~~g~p~~~~~~~~ 463 (592)
T 3zwu_A 384 DRPEWIVVSPKDGQVYCTLTNNAKRGEDGQPVGGPNPREKNVYGQILRWRTDRDDHASKTFAWDLFVVAGNPSVHAGTPK 463 (592)
T ss_dssp ECEEEEEECTTTCCEEEEECCBTTTTSTTCCCBTTBCCSSBSSCEEEEEEEGGGCTTCSEEEEEEEEECCCTTTSTTSGG
T ss_pred eccceeEEcCCCCEEEEEecCCcccccCcccccccccccCCcceeEEEEecCCCccccceeEEEEEEeccCccccccccc
Confidence 6899999997 78999987641110000 0 00 01112345889999765321 12221
Q ss_pred ---------cCccccceEEEcCCCCEEEEEecce-------------eEEeecCCCCceeEEecc-CCCCCCceEECCCC
Q 018705 187 ---------EGFYFANGIALSKNEDFVVVCESWK-------------RYWLKGDRAGILDAFIEN-LPGGPDNINLAPDG 243 (351)
Q Consensus 187 ---------~~~~~~ngi~~~~dg~~lyv~~~~~-------------~~~i~~~~~~~~~~~~~~-~~g~pd~i~~d~~G 243 (351)
..+.+|++|+++++|+ |||++-+. .+|..++..++...|... ...=.-|+++++||
T Consensus 464 ~~~~~~~~~~~f~~PDNL~fd~~G~-LwI~eDg~~~~~~~~~~~gnn~~~~~~~~~g~~~rf~~~P~gaE~TG~~fspDg 542 (592)
T 3zwu_A 464 GGSSNITPQNMFNSPDGLGFDKAGR-LWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGISFSPDQ 542 (592)
T ss_dssp GCCTTCCTTTCCCCEEEEEECTTCC-EEEEECCCCCCSGGGTTTCSCEEEEECTTTCCEEEEEECCTTCEEEEEEECTTS
T ss_pred ccccccCCCCCccCCcceEECCCCC-EEEEecCCCcccccccccccceEEEEeCCCCeEEEEEeCCCCccCcCeeECCCC
Confidence 1256799999999998 99977542 456555566776666532 11112367899998
Q ss_pred C-EEEEEecC
Q 018705 244 S-FWIGLIKM 252 (351)
Q Consensus 244 ~-lwva~~~~ 252 (351)
+ |||....+
T Consensus 543 ~tlfvniQHP 552 (592)
T 3zwu_A 543 KTLFVGIQHP 552 (592)
T ss_dssp SEEEEEEEST
T ss_pred CEEEEEEECC
Confidence 5 89987665
No 319
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=95.74 E-value=0.32 Score=48.88 Aligned_cols=135 Identities=13% Similarity=0.118 Sum_probs=75.9
Q ss_pred ceEEEeeCCCeEEEEEcC-----CEEEEEEcCCC--e-EEEEeecCCccccceEEcCCC-CEEEEeCCC----CeEEEcC
Q 018705 55 EDVSVVVSKGALYTATRD-----GWVKYFILHNE--T-LVNWKHIDSQSLLGLTTTKDG-GVILCDNEK----GLLKVTE 121 (351)
Q Consensus 55 e~i~~d~~~g~lyv~~~~-----g~I~~~d~~~g--~-~~~~~~~~~~p~~gl~~d~~G-~L~v~d~~~----gl~~~~~ 121 (351)
.++.+++++..+++...+ ..|+.+|..++ + ++.+........ .. ++++| .|++..... .|+.++.
T Consensus 271 ~~~~~SpDG~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~-~~-~~~dg~~l~~~s~~~~~~~~l~~~d~ 348 (741)
T 1yr2_A 271 HGASVSSDGRWVVITSSEGTDPVNTVHVARVTNGKIGPVTALIPDLKAQW-DF-VDGVGDQLWFVSGDGAPLKKIVRVDL 348 (741)
T ss_dssp EEEEECTTSCEEEEEEECTTCSCCEEEEEEEETTEECCCEEEECSSSSCE-EE-EEEETTEEEEEECTTCTTCEEEEEEC
T ss_pred EEEEECCCCCEEEEEEEccCCCcceEEEEECCCCCCcccEEecCCCCceE-EE-EeccCCEEEEEECCCCCCCEEEEEeC
Confidence 477888766666655533 48999998766 5 555543322222 23 23566 466655432 3777763
Q ss_pred -C--C-eEEecCC-CCCcccEEEccCCcEEEEeCCCccCCcccccccccccCCceEEEEeCCCCeEEEeec-CccccceE
Q 018705 122 -E--G-VEAIVPD-ASFTNDVIAASDGTLYFTVASTKYTPTDFYKDMAEGKPYGQLRKYDPKLKETTVLHE-GFYFANGI 195 (351)
Q Consensus 122 -~--g-~~~l~~~-~~~~n~l~~d~dG~ly~t~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~~~~~~~~~-~~~~~ngi 195 (351)
+ + .+.+... ...+.+++++ ++.++++... ....+|+.++.+++..+.+.. ......++
T Consensus 349 ~~~~~~~~~l~~~~~~~l~~~~~~-~~~lv~~~~~---------------dg~~~l~~~~~~g~~~~~l~~~~~~~v~~~ 412 (741)
T 1yr2_A 349 SGSTPRFDTVVPESKDNLESVGIA-GNRLFASYIH---------------DAKSQVLAFDLDGKPAGAVSLPGIGSASGL 412 (741)
T ss_dssp SSSSCEEEEEECCCSSEEEEEEEE-BTEEEEEEEE---------------TTEEEEEEEETTSCEEEECBCSSSCEEEEE
T ss_pred CCCccccEEEecCCCCeEEEEEEE-CCEEEEEEEE---------------CCEEEEEEEeCCCCceeeccCCCCeEEEEe
Confidence 3 3 3333322 2334555665 5567766532 012368889876555554432 23345678
Q ss_pred EEcCCCCEEEEE
Q 018705 196 ALSKNEDFVVVC 207 (351)
Q Consensus 196 ~~~~dg~~lyv~ 207 (351)
++++|++.++++
T Consensus 413 ~~s~d~~~l~~~ 424 (741)
T 1yr2_A 413 SGRPGDRHAYLS 424 (741)
T ss_dssp ECCBTCSCEEEE
T ss_pred ecCCCCCEEEEE
Confidence 888998866654
No 320
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=94.96 E-value=2.1 Score=38.94 Aligned_cols=106 Identities=13% Similarity=0.062 Sum_probs=58.2
Q ss_pred CCEEEEEEc-CCCeEEE-EeecCCccccceEEcC---CCCEEEEeCCCCeEEEc--CCC--eEEecCCC---CCcccEEE
Q 018705 72 DGWVKYFIL-HNETLVN-WKHIDSQSLLGLTTTK---DGGVILCDNEKGLLKVT--EEG--VEAIVPDA---SFTNDVIA 139 (351)
Q Consensus 72 ~g~I~~~d~-~~g~~~~-~~~~~~~p~~gl~~d~---~G~L~v~d~~~gl~~~~--~~g--~~~l~~~~---~~~n~l~~ 139 (351)
++.|..++. .+|+... ......... .++|.+ ++.++++.+..+.++++ ++| ++.+.... .....+++
T Consensus 156 d~~V~~~~~s~dG~~~~s~~~~~~~v~-~l~fs~~~g~~~~LaSgS~D~TIkIWDl~TGk~l~tL~g~~~~v~~v~~vaf 234 (356)
T 2w18_A 156 DQQVEVMTFAEDGGGKENQFLMPPEET-ILTFAEVQGMQEALLGTTIMNNIVIWNLKTGQLLKKMHIDDSYQASVCHKAY 234 (356)
T ss_dssp TCEEEEEEECTTSCEEEEEEECCCSSC-EEEEEEEETSTTEEEEEETTSEEEEEETTTCCEEEEEECCC---CCCEEEEE
T ss_pred CCcEEEEEECCCCceeeeeccCCCcee-eEEeeccCCCCceEEEecCCCcEEEEECCCCcEEEEEcCCCcceeeeEEEEE
Confidence 555666655 2343321 111112222 445554 67889887788899987 367 56664321 35566789
Q ss_pred ccCCcEEEEeCCCccCCcccccccccccCCceEEEEeCCCCeEE
Q 018705 140 ASDGTLYFTVASTKYTPTDFYKDMAEGKPYGQLRKYDPKLKETT 183 (351)
Q Consensus 140 d~dG~ly~t~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~~~~~ 183 (351)
+|||.+.++.+.... ...+..+..++.+..||+++++..
T Consensus 235 SpdG~~lvs~s~~~~-----~w~laSGs~D~tIklWd~~tgk~l 273 (356)
T 2w18_A 235 SEMGLLFIVLSHPCA-----KESESLRSPVFQLIVINPKTTLSV 273 (356)
T ss_dssp EETTEEEEEEC-----------------CCEEEEEEETTTTEEE
T ss_pred CCCCCEEEEeccCCC-----cceeeccCCCcEEEEEECCCCEEE
Confidence 999987765442100 112334455677888999888653
No 321
>4a9v_A PHOX; hydrolase, beta-propeller; 1.10A {Pseudomonas fluorescens} PDB: 3zwu_A 4a9x_A*
Probab=94.67 E-value=0.061 Score=52.15 Aligned_cols=59 Identities=12% Similarity=0.156 Sum_probs=39.6
Q ss_pred CcCCCceEEEeeCCCeEEEEEc-------------CCEEEEEEcCCCeEEEEeec--CCccccceEEcCCC-CEEEE
Q 018705 50 CVNHPEDVSVVVSKGALYTATR-------------DGWVKYFILHNETLVNWKHI--DSQSLLGLTTTKDG-GVILC 110 (351)
Q Consensus 50 ~~~~pe~i~~d~~~g~lyv~~~-------------~g~I~~~d~~~g~~~~~~~~--~~~p~~gl~~d~~G-~L~v~ 110 (351)
.+.+|.+|++| ..|.||+.+. ++.++++++.+|+++.+... ...|+ |+++++|+ .|||+
T Consensus 474 ~fnsPDnL~fd-~~G~LWf~TD~~~~~~g~~~~~gnn~v~~~dp~tGel~~fl~~P~~aEpn-GiafSPD~ktLfV~ 548 (592)
T 4a9v_A 474 MFNSPDGLGFD-KAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIGCEVT-GISFSPDQKTLFVG 548 (592)
T ss_dssp CCCCEEEEEEC-TTCCEEEEECCCCCCSGGGTTCCSCEEEEECTTTCCEEEEEECCTTCEEE-EEEECTTSSEEEEE
T ss_pred ccCCCCceEEC-CCCCEEEEeCCCcCccccccccCCceEEEEeCCCCeEEEEEeCCCCcccc-CCEECCCCCEEEEE
Confidence 37889999999 5788888432 22677777767777665432 24567 77777776 35554
No 322
>1sqj_A OXG-RCBH, oligoxyloglucan reducing-END-specific cellobiohydrolase; beta-propeller; 2.20A {Geotrichum SP} SCOP: b.69.13.1 b.69.13.1 PDB: 2ebs_A*
Probab=93.86 E-value=6.3 Score=39.91 Aligned_cols=96 Identities=6% Similarity=0.035 Sum_probs=59.0
Q ss_pred CCceEEEeeCC-CeEEEEEcCCEEEEEEcCCCeEEEEeecC-------CccccceEEcCC--CCEEEEeCC------CCe
Q 018705 53 HPEDVSVVVSK-GALYTATRDGWVKYFILHNETLVNWKHID-------SQSLLGLTTTKD--GGVILCDNE------KGL 116 (351)
Q Consensus 53 ~pe~i~~d~~~-g~lyv~~~~g~I~~~d~~~g~~~~~~~~~-------~~p~~gl~~d~~--G~L~v~d~~------~gl 116 (351)
...+|+++|.+ +.+|++...|.|+|-+.....++.+.... .... .|++|+. +.+|++... .++
T Consensus 16 ~i~~i~~~p~~~~~~~a~~~~ggv~rS~DgG~tW~~~~~~~~~~~~~~~~i~-~ia~dp~~~~~i~~~~g~~~~~~~~~v 94 (789)
T 1sqj_A 16 YITGIVAHPKTKDLLYARTDIGGAYRWDAGTSKWIPLNDFIEAQDMNIMGTE-SIALDPNNPDRLYLAQGRYVGDEWAAF 94 (789)
T ss_dssp CEEEEEECSSSTTCEEEEESSSCEEEEETTTTEEEESCTTCCGGGGGGCSEE-EEEEETTEEEEEEEEECSCTTSSCCEE
T ss_pred cEEEEEECCCCCCEEEEEecCCCEEEecCCCCCeeECccCCCcccccCCcee-EEEECCCCCCEEEEEeCccCCCcccEE
Confidence 45688898754 78999998888999886444566543311 1245 7889874 478988643 345
Q ss_pred EEEcCCC--eEEecCCC---------CCcccEEEccC--CcEEEEe
Q 018705 117 LKVTEEG--VEAIVPDA---------SFTNDVIAASD--GTLYFTV 149 (351)
Q Consensus 117 ~~~~~~g--~~~l~~~~---------~~~n~l~~d~d--G~ly~t~ 149 (351)
++-...| .+.+.... .....+++++. +.+|+..
T Consensus 95 ~~S~DgG~TW~~~~~~~~~~~~~~~~~~~~~iav~p~~~~~v~~g~ 140 (789)
T 1sqj_A 95 YVSEDRGQSFTIYESPFPMGANDMGRNNGERLAVNPFNSNEVWMGT 140 (789)
T ss_dssp EEESSTTSEEEEEECSSCCCTTSTTTTSCCCEEEETTEEEEEEEEC
T ss_pred EEECCCCCcceeccCCcccCccCCCccceeEEEEcCCCCCEEEEEe
Confidence 5444445 44433211 12356888874 4677754
No 323
>2cn3_A Xyloglucanase, beta-1,4-xyloglucan hydrolase; glycosylhydrolase, family GH74; HET: GLC BGC GAL; 1.95A {Clostridium thermocellum} PDB: 2cn2_A*
Probab=92.88 E-value=8.5 Score=38.55 Aligned_cols=96 Identities=14% Similarity=0.115 Sum_probs=60.4
Q ss_pred CCceEEEeeCC-CeEEEEEcCCEEEEEEcCCCeEEEEeecC-------CccccceEEcCC--CCEEEEeCC---------
Q 018705 53 HPEDVSVVVSK-GALYTATRDGWVKYFILHNETLVNWKHID-------SQSLLGLTTTKD--GGVILCDNE--------- 113 (351)
Q Consensus 53 ~pe~i~~d~~~-g~lyv~~~~g~I~~~d~~~g~~~~~~~~~-------~~p~~gl~~d~~--G~L~v~d~~--------- 113 (351)
...+|+++|.+ +.+|+++..|.|+|.+.....++.+.... .... .|++|+. +.+|++...
T Consensus 24 ~i~~i~~~p~~~~~~~~~~~~ggv~rS~D~G~tW~~i~~~~~~~~~~~~~i~-~i~~dp~~~~~v~v~~~~~~~~~~~~~ 102 (737)
T 2cn3_A 24 FMPGIVFNETEKDLIYARAAIGGAYRWDPSTETWIPLLDHFQMDEYSYYGVE-SIATDPVDPNRVYIVAGMYTNDWLPNM 102 (737)
T ss_dssp CCCEEEECSSSTTCEEEECSSSCEEEEETTTTEEEECCTTCCGGGGGGGCEE-EEEECSSSTTCEEEEECSCSSSSSCCC
T ss_pred eeeEEEECCCCCCEEEEEecCCcEEEeCCCCCCEEECcCccCcccccCCCcc-eEEeCCCCCCEEEEEecccccccccCC
Confidence 45689998754 78999998888999986555666643211 1234 7899973 589998632
Q ss_pred CCeEEEcCCC--eEEecCCC---------CCcccEEEccC--CcEEEEe
Q 018705 114 KGLLKVTEEG--VEAIVPDA---------SFTNDVIAASD--GTLYFTV 149 (351)
Q Consensus 114 ~gl~~~~~~g--~~~l~~~~---------~~~n~l~~d~d--G~ly~t~ 149 (351)
.++++-...| .+.+.... .....|+++|. +.+|+..
T Consensus 103 ~~l~~S~DgG~TW~~~~~~~~~~~~~~g~~~~~~l~~~p~~~~~v~~g~ 151 (737)
T 2cn3_A 103 GAILRSTDRGETWEKTILPFKMGGNMPGRSMGERLAIDPNDNRILYLGT 151 (737)
T ss_dssp CEEEEESSSSSSCEEEECSSCCCTTSTTTTSCCCEEECSSCTTCEEEEC
T ss_pred ccEEEeCCCCCCcccCCCCcccCCCcCcccccceEEECCCCCCEEEEee
Confidence 3455544444 34432211 12367899885 4688765
No 324
>3a0f_A Xyloglucanase; beta-propeller, hydrolase; 2.50A {Geotrichum SP}
Probab=91.53 E-value=13 Score=37.50 Aligned_cols=96 Identities=8% Similarity=0.040 Sum_probs=58.7
Q ss_pred CCceEEEeeCC-CeEEEEEcCCEEEEEEcCCCeEEEEeecC------------CccccceEEcC--CCCEEEEeC-----
Q 018705 53 HPEDVSVVVSK-GALYTATRDGWVKYFILHNETLVNWKHID------------SQSLLGLTTTK--DGGVILCDN----- 112 (351)
Q Consensus 53 ~pe~i~~d~~~-g~lyv~~~~g~I~~~d~~~g~~~~~~~~~------------~~p~~gl~~d~--~G~L~v~d~----- 112 (351)
.-.+|+++|.+ +.+|++...|.|+|-+-....++...... .... .|++|+ .+.+|++..
T Consensus 22 ~i~~i~~~p~~~~~~y~~~~~ggv~~S~DgG~tW~~~~~~~~~~~~~~~~~~~~~~~-~ia~dp~~~~~~~~~~g~~~~~ 100 (763)
T 3a0f_A 22 FISGLVAHPTEKDLIYARTDIGGTYRWNAAKWEWEPITDFIINNALAGNGANLLGTE-SIALDPHNPDRLYLAQGDYVQW 100 (763)
T ss_dssp CEEEEEECSSSTTCEEEEESSSCEEEEETTTTEEEESCTTCBTTCSSSCCCCCCSEE-EEECCTTCTTCEEEEECSCTTT
T ss_pred ceeEEEeCCCCCCEEEEEeccCcEEEECCCCCCeeECccCccccccCCCccccccee-EEEECCCCCCEEEEEecccccC
Confidence 45689999766 68999998888999875344555543311 1234 688887 358999764
Q ss_pred --CCCeEEEcCCC--eEEecCCC-------C--CcccEEEccC--CcEEEEe
Q 018705 113 --EKGLLKVTEEG--VEAIVPDA-------S--FTNDVIAASD--GTLYFTV 149 (351)
Q Consensus 113 --~~gl~~~~~~g--~~~l~~~~-------~--~~n~l~~d~d--G~ly~t~ 149 (351)
..++++=...| .+.+.... . ....|++++. +.+|+..
T Consensus 101 ~~~~~i~~S~DgG~TW~~~~~~~~~~~~~~g~~~~~~l~v~p~~~~~v~a~~ 152 (763)
T 3a0f_A 101 DPWAAFLVSDDRGKTFKQYRSPVPMGANDMGRNGGERLAVNPHWTDELWFGS 152 (763)
T ss_dssp CSCCEEEEESSTTSSCEEEECSSCCCTTSTTTTSBCCEEECTTSTTCEEEEC
T ss_pred CCCceEEEECCCCCCceeccCCcccCccccCccccceEEECCCCCCEEEEEe
Confidence 23455444444 44433211 1 1146888874 5788764
No 325
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=90.79 E-value=6.5 Score=39.47 Aligned_cols=62 Identities=11% Similarity=0.067 Sum_probs=36.9
Q ss_pred CcccEEEc-cCCc-EEEEeCCCccCCcccccccccccCCceEEEEeCCCC-eEEEeecCcc-ccceEEEcCCCCEEEEEe
Q 018705 133 FTNDVIAA-SDGT-LYFTVASTKYTPTDFYKDMAEGKPYGQLRKYDPKLK-ETTVLHEGFY-FANGIALSKNEDFVVVCE 208 (351)
Q Consensus 133 ~~n~l~~d-~dG~-ly~t~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~~-~~~~~~~~~~-~~ngi~~~~dg~~lyv~~ 208 (351)
...+.+++ |||+ |.++.... +.....|+++|.+++ +. +...+. ...+++++|||+.|+++.
T Consensus 175 ~~~~~~~S~PDG~~lAy~~~~~-------------G~~~~~l~v~dl~~g~~~--l~~~~~~~~~~~~WspDg~~l~y~~ 239 (751)
T 2xe4_A 175 DVMEVKPAPPEHDLVAFSVDMS-------------GNEVYTIEFKRISDPSQT--IADKVSGTNGEIVWGPDHTSLFYVT 239 (751)
T ss_dssp EEEEEEECTTTTCEEEEEEESS-------------SSSCEEEEEEETTCTTCC--CCCCEEEECSCCEECSSTTEEEEEE
T ss_pred EEeeeEecCCCCCEEEEEEeCC-------------CCceEEEEEEECCCCCEe--CCccccCceeeEEEecCCCEEEEEE
Confidence 34567899 9995 54443320 111235999998887 52 111111 134689999998777765
Q ss_pred c
Q 018705 209 S 209 (351)
Q Consensus 209 ~ 209 (351)
.
T Consensus 240 ~ 240 (751)
T 2xe4_A 240 K 240 (751)
T ss_dssp E
T ss_pred E
Confidence 4
No 326
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=90.01 E-value=0.9 Score=41.15 Aligned_cols=105 Identities=8% Similarity=0.076 Sum_probs=57.8
Q ss_pred CCeEEEEEcCCEEEEEEcCCCeEEEEeecC--CccccceEE---cCCCCEEEEe--CCCCeEEEcC-CCeEEecCCC---
Q 018705 63 KGALYTATRDGWVKYFILHNETLVNWKHID--SQSLLGLTT---TKDGGVILCD--NEKGLLKVTE-EGVEAIVPDA--- 131 (351)
Q Consensus 63 ~g~lyv~~~~g~I~~~d~~~g~~~~~~~~~--~~p~~gl~~---d~~G~L~v~d--~~~gl~~~~~-~g~~~l~~~~--- 131 (351)
++.+|+++.||.|+-+|.++|+..--.... ..+. ...- ..+|.+|+.. ..+.++.++. +|...+....
T Consensus 10 ~~~V~v~t~dG~l~Ald~~tG~~~W~~~~~~~~p~~-~~~~~~~~~~~~~~vv~p~~dG~l~a~~~~~G~~~~~~~~~~l 88 (339)
T 2be1_A 10 SDILIAADVEGGLHAVDRRNGHIIWSIEPENFQPLI-EIQEPSRLETYETLIIEPFGDGNIYYFNAHQGLQKLPLSIRQL 88 (339)
T ss_dssp EEEEEEEETTSCEEEEETTTTEEEEEECGGGSCCSE-ECCCSCTTTSSEEEEECCSTTTEEEEEETTTEEEEEEEEHHHH
T ss_pred CCEEEEEeCCCeEEEEECCCCcEEEEecCCccCCcE-EecCCccccCCcEEEEEECCCCEEEEEECCCCcEEeeeccccc
Confidence 578999999999999999899764222221 1122 2110 0144566654 3445677774 5522222111
Q ss_pred --CCccc----EEE------ccCCcEEEEeCCCccCCcccccccccccCCceEEEEeCCCCeEEEee
Q 018705 132 --SFTND----VIA------ASDGTLYFTVASTKYTPTDFYKDMAEGKPYGQLRKYDPKLKETTVLH 186 (351)
Q Consensus 132 --~~~n~----l~~------d~dG~ly~t~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~~~~~~~~ 186 (351)
..|-- .++ +.+|.+|+... +|+++-+|..+|+.....
T Consensus 89 v~~SP~~~~~~pvv~~~~~~~~~g~Vy~Gs~------------------~g~l~ald~~tG~~~W~~ 137 (339)
T 2be1_A 89 VSTSPLHLKTNIVVNDSGKIVEDEKVYTGSM------------------RTIMYTINMLNGEIISAF 137 (339)
T ss_dssp HTTCSEEEECC----------CCEEEEECEE------------------EEEEEEEETTTCCEEEEE
T ss_pred eeccccccCCCceeecccccccCCEEEEEec------------------CCEEEEEECCCCcEEEEE
Confidence 11111 112 25667777543 468999998888875543
No 327
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=89.94 E-value=7.6 Score=35.68 Aligned_cols=126 Identities=8% Similarity=0.081 Sum_probs=72.9
Q ss_pred CCceEEEeeCCCeEEEEEcCCEEEEEEcCCCeE-EEEeecCCccccceEEcCCCCEEEEeCCCCeEEEc-CCC-eEEecC
Q 018705 53 HPEDVSVVVSKGALYTATRDGWVKYFILHNETL-VNWKHIDSQSLLGLTTTKDGGVILCDNEKGLLKVT-EEG-VEAIVP 129 (351)
Q Consensus 53 ~pe~i~~d~~~g~lyv~~~~g~I~~~d~~~g~~-~~~~~~~~~p~~gl~~d~~G~L~v~d~~~gl~~~~-~~g-~~~l~~ 129 (351)
.+..+++ ++..|+++ .++.|..||..+-.. ........... .+..-+. ++.+++..+.++..+ +++ ...+.
T Consensus 89 ~V~~l~f--d~~~L~v~-~~~~l~v~dv~sl~~~~~~~~~~~~v~-~i~~~~p-~~av~~~dG~L~v~dl~~~~~~~~~- 162 (388)
T 1xip_A 89 DVIFVCF--HGDQVLVS-TRNALYSLDLEELSEFRTVTSFEKPVF-QLKNVNN-TLVILNSVNDLSALDLRTKSTKQLA- 162 (388)
T ss_dssp TEEEEEE--ETTEEEEE-ESSEEEEEESSSTTCEEEEEECSSCEE-EEEECSS-EEEEEETTSEEEEEETTTCCEEEEE-
T ss_pred CeeEEEE--CCCEEEEE-cCCcEEEEEchhhhccCccceeeccee-eEEecCC-CEEEEECCCCEEEEEccCCcccccc-
Confidence 3778888 47899998 778899998643221 11111112222 4433322 366666555555555 344 33322
Q ss_pred CCCCcccEEEccCCcEEEEeCCCccCCcccccccccccCCceEEEEeCCCCeE--E-Eee------c---CccccceEEE
Q 018705 130 DASFTNDVIAASDGTLYFTVASTKYTPTDFYKDMAEGKPYGQLRKYDPKLKET--T-VLH------E---GFYFANGIAL 197 (351)
Q Consensus 130 ~~~~~n~l~~d~dG~ly~t~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~~~~--~-~~~------~---~~~~~ngi~~ 197 (351)
..+.+++++++| +.+... +|.+..|++++++. . .+. + .-.....|++
T Consensus 163 --~~Vs~v~WSpkG-~~vg~~------------------dg~i~~~~~~~~~~~~k~~I~~Pp~~~~~~~~~~~V~sI~w 221 (388)
T 1xip_A 163 --QNVTSFDVTNSQ-LAVLLK------------------DRSFQSFAWRNGEMEKQFEFSLPSELEELPVEEYSPLSVTI 221 (388)
T ss_dssp --ESEEEEEECSSE-EEEEET------------------TSCEEEEEEETTEEEEEEEECCCHHHHTSCTTTSEEEEEEE
T ss_pred --CCceEEEEcCCc-eEEEEc------------------CCcEEEEcCCCccccccceecCCcccccccCCCeeEEEEEE
Confidence 367899999999 444332 46678888877774 2 231 1 1244667888
Q ss_pred cCCCCEEE
Q 018705 198 SKNEDFVV 205 (351)
Q Consensus 198 ~~dg~~ly 205 (351)
.+++.++.
T Consensus 222 l~~~~flv 229 (388)
T 1xip_A 222 LSPQDFLA 229 (388)
T ss_dssp SSSSEEEE
T ss_pred ecCCeEEE
Confidence 88877443
No 328
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=85.82 E-value=0.21 Score=45.73 Aligned_cols=98 Identities=9% Similarity=-0.026 Sum_probs=46.6
Q ss_pred CCCeEEEEEcCCEEEEEEcCCCeEEEEeecCCccccceEEc-CCCCEEEEeCCCCeEEEcC-CC-e-EEecCCCCCcccE
Q 018705 62 SKGALYTATRDGWVKYFILHNETLVNWKHIDSQSLLGLTTT-KDGGVILCDNEKGLLKVTE-EG-V-EAIVPDASFTNDV 137 (351)
Q Consensus 62 ~~g~lyv~~~~g~I~~~d~~~g~~~~~~~~~~~p~~gl~~d-~~G~L~v~d~~~gl~~~~~-~g-~-~~l~~~~~~~n~l 137 (351)
.++.+|++..+|.|+.+|.++|+.. |...... ..... .++.+|++.....++.++. +| . -.+... .....
T Consensus 91 ~~~~v~~g~~dg~v~a~D~~tG~~~-w~~~~~~---~~~~~p~~~~v~~~~~dg~v~a~d~~tG~~~W~~~~~--~~~~~ 164 (369)
T 2hz6_A 91 SDGILYMGKKQDIWYVIDLLTGEKQ-QTLSSAF---ADSLSPSTSLLYLGRTEYTITMYDTKTRELRWNATYF--DYAAS 164 (369)
T ss_dssp ----CCCCEEEEEEEEECCC--------------------------EEEEEEEEEEECCCSSSSSCCCEEEEE--EECCB
T ss_pred cCCEEEEEeCCCEEEEEECCCCcEE-EEecCCC---cccccccCCEEEEEecCCEEEEEECCCCCEEEeEecc--cccCc
Confidence 3678899888999999999888763 2211111 11122 3457888776556777774 66 2 111110 01222
Q ss_pred EEcc----CCcEEEEeCCCccCCcccccccccccCCceEEEEeCCCCeEE
Q 018705 138 IAAS----DGTLYFTVASTKYTPTDFYKDMAEGKPYGQLRKYDPKLKETT 183 (351)
Q Consensus 138 ~~d~----dG~ly~t~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~~~~~ 183 (351)
+++. ++.+|++.. +|.|+.+|.++|+..
T Consensus 165 ~~~~~~~~~~~v~~~~~------------------dg~v~a~d~~tG~~~ 196 (369)
T 2hz6_A 165 LPEDDVDYKMSHFVSNG------------------DGLVVTVDSESGDVL 196 (369)
T ss_dssp CCCCCTTCCCCEEEEET------------------SCEEEEECTTTCCEE
T ss_pred cccCCccccceEEEECC------------------CCEEEEEECCCCcEE
Confidence 3333 256777653 367888888877753
No 329
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=85.38 E-value=14 Score=33.95 Aligned_cols=129 Identities=15% Similarity=0.105 Sum_probs=71.6
Q ss_pred CCceEEEeeCCCeEEEEEcCCEEEEEEcCCCe---------EEE--EeecCCccccceEEcCCC-CEEEEeCCCCeEEEc
Q 018705 53 HPEDVSVVVSKGALYTATRDGWVKYFILHNET---------LVN--WKHIDSQSLLGLTTTKDG-GVILCDNEKGLLKVT 120 (351)
Q Consensus 53 ~pe~i~~d~~~g~lyv~~~~g~I~~~d~~~g~---------~~~--~~~~~~~p~~gl~~d~~G-~L~v~d~~~gl~~~~ 120 (351)
....+++.+..|.++++..++ +..++.++.+ ++. ...... ++ .+++ +| .|+++ ...++..++
T Consensus 39 ~~nlLais~~~gll~a~~~~~-l~v~~~~~l~~~~~~~~~~~~~~~~~~lp~-V~-~l~f--d~~~L~v~-~~~~l~v~d 112 (388)
T 1xip_A 39 SLQNLDISNSKSLFVAASGSK-AVVGELQLLRDHITSDSTPLTFKWEKEIPD-VI-FVCF--HGDQVLVS-TRNALYSLD 112 (388)
T ss_dssp CCBCEEEETTTTEEEEEETTE-EEEEEHHHHHHHHHSSSCCCCCSEEEECTT-EE-EEEE--ETTEEEEE-ESSEEEEEE
T ss_pred cccEEEEcCCCCEEEEeCCCE-EEEEEhhHhhhhhccccccccceEEeeCCC-ee-EEEE--CCCEEEEE-cCCcEEEEE
Confidence 456789998888999988876 6667643222 211 112334 77 8999 55 57777 344555555
Q ss_pred CCC---eEEecCCCCCcccEEEccCCcEEEEeCCCccCCcccccccccccCCceEEEEeCCCCeEEEeecCccccceEEE
Q 018705 121 EEG---VEAIVPDASFTNDVIAASDGTLYFTVASTKYTPTDFYKDMAEGKPYGQLRKYDPKLKETTVLHEGFYFANGIAL 197 (351)
Q Consensus 121 ~~g---~~~l~~~~~~~n~l~~d~dG~ly~t~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~~~~~~~~~~~~~~ngi~~ 197 (351)
-.. ...........+++..-+. ++.+.. .+|.|++||.++++...+. .....+++
T Consensus 113 v~sl~~~~~~~~~~~~v~~i~~~~p-~~av~~------------------~dG~L~v~dl~~~~~~~~~---~~Vs~v~W 170 (388)
T 1xip_A 113 LEELSEFRTVTSFEKPVFQLKNVNN-TLVILN------------------SVNDLSALDLRTKSTKQLA---QNVTSFDV 170 (388)
T ss_dssp SSSTTCEEEEEECSSCEEEEEECSS-EEEEEE------------------TTSEEEEEETTTCCEEEEE---ESEEEEEE
T ss_pred chhhhccCccceeecceeeEEecCC-CEEEEE------------------CCCCEEEEEccCCcccccc---CCceEEEE
Confidence 211 1111111112333332222 132222 2578999998766654433 35668999
Q ss_pred cCCCCEEEEEecce
Q 018705 198 SKNEDFVVVCESWK 211 (351)
Q Consensus 198 ~~dg~~lyv~~~~~ 211 (351)
||+| ++++..++
T Consensus 171 SpkG--~~vg~~dg 182 (388)
T 1xip_A 171 TNSQ--LAVLLKDR 182 (388)
T ss_dssp CSSE--EEEEETTS
T ss_pred cCCc--eEEEEcCC
Confidence 9999 45555444
No 330
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=82.90 E-value=40 Score=33.60 Aligned_cols=106 Identities=6% Similarity=0.055 Sum_probs=56.9
Q ss_pred ceEEc-CCCCE--EEEeCCC----CeEEEcC-CCeEEecCCC-CCcccEEEccCC-cEEEEeCCCccCCccccccccccc
Q 018705 98 GLTTT-KDGGV--ILCDNEK----GLLKVTE-EGVEAIVPDA-SFTNDVIAASDG-TLYFTVASTKYTPTDFYKDMAEGK 167 (351)
Q Consensus 98 gl~~d-~~G~L--~v~d~~~----gl~~~~~-~g~~~l~~~~-~~~n~l~~d~dG-~ly~t~~~~~~~~~~~~~~~~~~~ 167 (351)
+.+++ +||+. |..+..+ .++.++. +|.+.+.... ....++++++|| .|+++..... .
T Consensus 178 ~~~~S~PDG~~lAy~~~~~G~~~~~l~v~dl~~g~~~l~~~~~~~~~~~~WspDg~~l~y~~~d~~-------------~ 244 (751)
T 2xe4_A 178 EVKPAPPEHDLVAFSVDMSGNEVYTIEFKRISDPSQTIADKVSGTNGEIVWGPDHTSLFYVTKDET-------------L 244 (751)
T ss_dssp EEEECTTTTCEEEEEEESSSSSCEEEEEEETTCTTCCCCCCEEEECSCCEECSSTTEEEEEEECTT-------------C
T ss_pred eeEecCCCCCEEEEEEeCCCCceEEEEEEECCCCCEeCCccccCceeeEEEecCCCEEEEEEECCC-------------C
Confidence 67889 99963 3344321 2666663 3312222211 224578899998 5666642100 0
Q ss_pred CCceEEEEeCCCCe---EEEee-cCccccceEEEcCCCCEEEEEecce---eEEee
Q 018705 168 PYGQLRKYDPKLKE---TTVLH-EGFYFANGIALSKNEDFVVVCESWK---RYWLK 216 (351)
Q Consensus 168 ~~g~l~~~d~~~~~---~~~~~-~~~~~~ngi~~~~dg~~lyv~~~~~---~~~i~ 216 (351)
....|++++..+++ ..++. ....+-.++.+|+||++|+++.... .+++.
T Consensus 245 ~~~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~ 300 (751)
T 2xe4_A 245 RENKVWRHVMGKLQSEDVCLYEEHNPLFSAFMYKAADTNTLCIGSQSPETAEVHLL 300 (751)
T ss_dssp CEEEEEEEETTSCGGGCEEEEECCCTTCEEEEEECTTSSEEEEEEECSSCEEEEEE
T ss_pred CCCEEEEEECCCCchhcEEEEecCCCceEEEEEECCCCCEEEEEecCCCCceEEEE
Confidence 01368888877653 22222 1112334678999999888765332 45543
No 331
>2cn3_A Xyloglucanase, beta-1,4-xyloglucan hydrolase; glycosylhydrolase, family GH74; HET: GLC BGC GAL; 1.95A {Clostridium thermocellum} PDB: 2cn2_A*
Probab=82.86 E-value=25 Score=35.05 Aligned_cols=146 Identities=19% Similarity=0.213 Sum_probs=79.7
Q ss_pred ceEEEeeCC-CeEEEEEcC-CEEEEEEcCCC-eEEEEeecCC--------------c---cccceEEcCC--------CC
Q 018705 55 EDVSVVVSK-GALYTATRD-GWVKYFILHNE-TLVNWKHIDS--------------Q---SLLGLTTTKD--------GG 106 (351)
Q Consensus 55 e~i~~d~~~-g~lyv~~~~-g~I~~~d~~~g-~~~~~~~~~~--------------~---p~~gl~~d~~--------G~ 106 (351)
++|+++|.+ +.+|++... ..|++=+- .| .++....... . .. .+++|+. ++
T Consensus 135 ~~l~~~p~~~~~v~~g~~~g~gl~~S~D-gG~tW~~~~~~~~~~~~~~~p~~~~~~~~~g~~-~v~~dp~~~~~~~~~~~ 212 (737)
T 2cn3_A 135 ERLAIDPNDNRILYLGTRCGNGLWRSTD-YGVTWSKVESFPNPGTYIYDPNFDYTKDIIGVV-WVVFDKSSSTPGNPTKT 212 (737)
T ss_dssp CCEEECSSCTTCEEEECSTTCCEEEESS-TTSSCEECTTCCCCCCCBSCTTSTTTCSBCCEE-EEEECGGGSCTTSCCSC
T ss_pred ceEEECCCCCCEEEEeeccCCcEEEeCC-CCcceecccCCCCCcccccCcccccccCCCCEE-EEEcCCCCcccCCCCCE
Confidence 689999765 789998844 45776432 34 3444321000 0 11 3677753 38
Q ss_pred EEEEeCCC--CeEEEcCCC--eEEecCCC--CCcccEEEccCCcEEEEeCCCccCCcccccccccccCCceEEEEeCCCC
Q 018705 107 VILCDNEK--GLLKVTEEG--VEAIVPDA--SFTNDVIAASDGTLYFTVASTKYTPTDFYKDMAEGKPYGQLRKYDPKLK 180 (351)
Q Consensus 107 L~v~d~~~--gl~~~~~~g--~~~l~~~~--~~~n~l~~d~dG~ly~t~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~~ 180 (351)
+|++.... ++++=...| .+.+.... ..+..+++++++.+|++.....- .+.+...+.|++.+..++
T Consensus 213 v~~~~~~~~~~v~~S~DgG~tW~~~~~~p~~~~~~~~~~~~~~~l~~~~~d~~g--------~y~~~~~g~v~~s~d~G~ 284 (737)
T 2cn3_A 213 IYVGVADKNESIYRSTDGGVTWKAVPGQPKGLLPHHGVLASNGMLYITYGDTCG--------PYDGNGKGQVWKFNTRTG 284 (737)
T ss_dssp EEEEESCSSCCEEEESSTTSCCEECTTCCCSSEEEEEEECTTSEEEEEEESSCC--------SSCCSCCEEEEEEETTTC
T ss_pred EEEEecCCCccEEEEcCCCCceEECCCCCCcccceEEEECCCCeEEEEecCCCC--------ccccccCceEEEEeCCCC
Confidence 99986442 465544444 44443211 23345678889999987532100 011123568999987766
Q ss_pred eEEEeecCcc----cc---ceEEEcCCC-CEEEEEecc
Q 018705 181 ETTVLHEGFY----FA---NGIALSKNE-DFVVVCESW 210 (351)
Q Consensus 181 ~~~~~~~~~~----~~---ngi~~~~dg-~~lyv~~~~ 210 (351)
+.+.+..... .+ .+|+++|.. +.+|++...
T Consensus 285 tW~~i~~~~~~~~~~~~~~~~i~v~p~~~~~ly~~~~~ 322 (737)
T 2cn3_A 285 EWIDITPIPYSSSDNRFCFAGLAVDRQNPDIIMVTSMN 322 (737)
T ss_dssp CEEECCSSCTTSTTCCSEEEEEEECTTCTTCEEEEEEC
T ss_pred CEEEccCCCCCCcccccccccEEEcCCCCCEEEEEecc
Confidence 6665432111 01 248888743 468887543
No 332
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=82.28 E-value=24 Score=30.57 Aligned_cols=104 Identities=8% Similarity=-0.070 Sum_probs=54.7
Q ss_pred CEEEEEEcCCCeEEEEeecC--CccccceEEcCCCCEEEEeCC-----C-------CeEEEcC-CC-eEEecCCC-CCcc
Q 018705 73 GWVKYFILHNETLVNWKHID--SQSLLGLTTTKDGGVILCDNE-----K-------GLLKVTE-EG-VEAIVPDA-SFTN 135 (351)
Q Consensus 73 g~I~~~d~~~g~~~~~~~~~--~~p~~gl~~d~~G~L~v~d~~-----~-------gl~~~~~-~g-~~~l~~~~-~~~n 135 (351)
..++++|+.++++.....+. .+-. .-+.--++.||+.... . .++++++ ++ .+.+.... ..-.
T Consensus 13 ~~~~~yd~~~~~W~~~~~~~p~~r~~-~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~ 91 (315)
T 4asc_A 13 EGAVAYDPAANECYCASLSSQVPKNH-VSLVTKENQVFVAGGLFYNEDNKEDPMSAYFLQFDHLDSEWLGMPPLPSPRCL 91 (315)
T ss_dssp TEEEEEETTTTEEEEEECCCCSCSSE-EEEECTTCCEEEEEEEEECSSCSSSCEEEEEEEEETTTTEEEECCCBSSCEES
T ss_pred CceEEECCCCCeEecCCCCCCCCccc-eEEEEECCEEEEEcCcccCCCCCccccccceEEecCCCCeEEECCCCCcchhc
Confidence 56999999999886522221 2222 1222357788885431 1 1566775 44 44443221 1111
Q ss_pred cEEEccCCcEEEEeCCCccCCcccccccccccCCceEEEEeCCCCeEEEee
Q 018705 136 DVIAASDGTLYFTVASTKYTPTDFYKDMAEGKPYGQLRKYDPKLKETTVLH 186 (351)
Q Consensus 136 ~l~~d~dG~ly~t~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~~~~~~~~ 186 (351)
.-++.-++.||+--...... .......+++||+.+++.+.+.
T Consensus 92 ~~~~~~~~~lyv~GG~~~~~---------~~~~~~~~~~~d~~~~~W~~~~ 133 (315)
T 4asc_A 92 FGLGEALNSIYVVGGREIKD---------GERCLDSVMCYDRLSFKWGESD 133 (315)
T ss_dssp CEEEEETTEEEEECCEESST---------TCCBCCCEEEEETTTTEEEECC
T ss_pred eeEEEECCEEEEEeCCcCCC---------CCcccceEEEECCCCCcEeECC
Confidence 22223367888765421000 0112356999999988877654
No 333
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=81.08 E-value=2.2 Score=38.53 Aligned_cols=25 Identities=12% Similarity=0.191 Sum_probs=22.4
Q ss_pred CCCeEEEEEcCCEEEEEEcCCCeEE
Q 018705 62 SKGALYTATRDGWVKYFILHNETLV 86 (351)
Q Consensus 62 ~~g~lyv~~~~g~I~~~d~~~g~~~ 86 (351)
.++.+|++..+|+++.+|..+|+..
T Consensus 110 ~~g~Vy~Gs~~g~l~ald~~tG~~~ 134 (339)
T 2be1_A 110 EDEKVYTGSMRTIMYTINMLNGEII 134 (339)
T ss_dssp CCEEEEECEEEEEEEEEETTTCCEE
T ss_pred cCCEEEEEecCCEEEEEECCCCcEE
Confidence 4789999999999999999999774
No 334
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=80.58 E-value=27 Score=30.11 Aligned_cols=101 Identities=14% Similarity=0.142 Sum_probs=55.7
Q ss_pred CEEEEEEcCCCeEEEEeecCC-ccccceEEcCCCCEEEEeCC----------CCeEEEcC-CC-eEEecCCC-CCcccEE
Q 018705 73 GWVKYFILHNETLVNWKHIDS-QSLLGLTTTKDGGVILCDNE----------KGLLKVTE-EG-VEAIVPDA-SFTNDVI 138 (351)
Q Consensus 73 g~I~~~d~~~g~~~~~~~~~~-~p~~gl~~d~~G~L~v~d~~----------~gl~~~~~-~g-~~~l~~~~-~~~n~l~ 138 (351)
..++++|+.+++++....... +-..+++. -++.||+.... ..+++++. +. .+.+.... ......+
T Consensus 39 ~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~-~~~~lyv~GG~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~ 117 (308)
T 1zgk_A 39 SYLEAYNPSNGTWLRLADLQVPRSGLAGCV-VGGLLYAVGGRNNSPDGNTDSSALDCYNPMTNQWSPCAPMSVPRNRIGV 117 (308)
T ss_dssp CCEEEEETTTTEEEECCCCSSCCBSCEEEE-ETTEEEEECCEEEETTEEEECCCEEEEETTTTEEEECCCCSSCCBTCEE
T ss_pred ceEEEEcCCCCeEeECCCCCcccccceEEE-ECCEEEEECCCcCCCCCCeecceEEEECCCCCeEeECCCCCcCccccEE
Confidence 458999998888876643221 11102222 36788886432 24677775 44 45443221 2222223
Q ss_pred EccCCcEEEEeCCCccCCcccccccccccCCceEEEEeCCCCeEEEee
Q 018705 139 AASDGTLYFTVASTKYTPTDFYKDMAEGKPYGQLRKYDPKLKETTVLH 186 (351)
Q Consensus 139 ~d~dG~ly~t~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~~~~~~~~ 186 (351)
+.-+|.||+--.... ......+++||+.+++.+.+.
T Consensus 118 ~~~~~~iyv~GG~~~------------~~~~~~~~~yd~~~~~W~~~~ 153 (308)
T 1zgk_A 118 GVIDGHIYAVGGSHG------------CIHHNSVERYEPERDEWHLVA 153 (308)
T ss_dssp EEETTEEEEECCEET------------TEECCCEEEEETTTTEEEECC
T ss_pred EEECCEEEEEcCCCC------------CcccccEEEECCCCCeEeECC
Confidence 334778887643210 011246999999988877654
No 335
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=79.15 E-value=12 Score=36.70 Aligned_cols=107 Identities=11% Similarity=0.032 Sum_probs=59.9
Q ss_pred CCeEEEEeecCCccccceEEcC-CCCEEEEeCC------------CCeEEEcC-CC-eEEe---cCCC-CCcccEEEccC
Q 018705 82 NETLVNWKHIDSQSLLGLTTTK-DGGVILCDNE------------KGLLKVTE-EG-VEAI---VPDA-SFTNDVIAASD 142 (351)
Q Consensus 82 ~g~~~~~~~~~~~p~~gl~~d~-~G~L~v~d~~------------~gl~~~~~-~g-~~~l---~~~~-~~~n~l~~d~d 142 (351)
+++++........+. ..++.+ +|+||+.... ..+..+++ ++ .+.+ .... .+..++++..+
T Consensus 175 ~~~W~~~~~~P~~~~-~~av~~~~g~l~v~GG~~~~~~~~~~~~~~~~~~yd~~t~~w~~~~~~~~~~~~~~~~~~~~~~ 253 (656)
T 1k3i_A 175 LGRWGPTIDLPIVPA-AAAIEPTSGRVLMWSSYRNDAFGGSPGGITLTSSWDPSTGIVSDRTVTVTKHDMFCPGISMDGN 253 (656)
T ss_dssp SCEEEEEEECSSCCS-EEEEETTTTEEEEEEECCCTTTCSCCCSEEEEEEECTTTCCBCCCEEEECSCCCSSCEEEECTT
T ss_pred CCeeeeeccCCCCce-eEEEEecCCEEEEEecccccccccCCCCeEEEEEEeCCCCcEEeCcccCCCCCCccccccCCCC
Confidence 344433333333455 667666 8899886321 02556664 44 3222 1111 33445777889
Q ss_pred CcEEEEeCCCccCCcccccccccccCCceEEEEeCCCCeEEEeecCccc---cceEEEcCCCCEEEEE
Q 018705 143 GTLYFTVASTKYTPTDFYKDMAEGKPYGQLRKYDPKLKETTVLHEGFYF---ANGIALSKNEDFVVVC 207 (351)
Q Consensus 143 G~ly~t~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~~~~~~~~~~~~~---~ngi~~~~dg~~lyv~ 207 (351)
|.||+.-... ...+++||+.+++.+.+.. +.. -.+.++.+|++ +|+.
T Consensus 254 g~lyv~GG~~----------------~~~v~~yd~~t~~W~~~~~-~~~~R~~~s~~~~~dg~-iyv~ 303 (656)
T 1k3i_A 254 GQIVVTGGND----------------AKKTSLYDSSSDSWIPGPD-MQVARGYQSSATMSDGR-VFTI 303 (656)
T ss_dssp SCEEEECSSS----------------TTCEEEEEGGGTEEEECCC-CSSCCSSCEEEECTTSC-EEEE
T ss_pred CCEEEeCCCC----------------CCceEEecCcCCceeECCC-CCccccccceEEecCCe-EEEE
Confidence 9999876431 2369999999887766542 221 23455666887 6663
No 336
>1sqj_A OXG-RCBH, oligoxyloglucan reducing-END-specific cellobiohydrolase; beta-propeller; 2.20A {Geotrichum SP} SCOP: b.69.13.1 b.69.13.1 PDB: 2ebs_A*
Probab=78.40 E-value=29 Score=35.02 Aligned_cols=120 Identities=16% Similarity=0.156 Sum_probs=66.4
Q ss_pred ceEEEeeCC-CeEEEEEcCCEEEEEEcCCC-eEEEEeecC------CccccceEEcCC--CCEEEEeCC-CCeEEEcCCC
Q 018705 55 EDVSVVVSK-GALYTATRDGWVKYFILHNE-TLVNWKHID------SQSLLGLTTTKD--GGVILCDNE-KGLLKVTEEG 123 (351)
Q Consensus 55 e~i~~d~~~-g~lyv~~~~g~I~~~d~~~g-~~~~~~~~~------~~p~~gl~~d~~--G~L~v~d~~-~gl~~~~~~g 123 (351)
+.++++|.+ +.+|++...+.|++=+- .| .++...... .... .|++++. +.+|++... .++++=...|
T Consensus 124 ~~iav~p~~~~~v~~g~~~~gl~~S~D-gG~TW~~~~~~~~~~~~~~~~~-~i~~~p~~~~~~~~~~~~~~~v~~S~DgG 201 (789)
T 1sqj_A 124 ERLAVNPFNSNEVWMGTRTEGIWKSSD-RAKTWTNVTSIPDAFTNGIGYT-SVIFDPERNGTIYASATAPQGMYVTHDGG 201 (789)
T ss_dssp CCEEEETTEEEEEEEECSSSCEEEESS-TTSSCEEETTSCCCCSTTTCEE-EEEECTTSTTCEEEEESSTTCEEEESSTT
T ss_pred eEEEEcCCCCCEEEEEeccCCEEEECC-CCcccCCCccCccccCCCCCeE-EEEECCCCCCEEEEEEcCCCeEEEEcCCC
Confidence 579998653 68899886676877543 34 455443211 1123 5677753 479998765 5666544444
Q ss_pred --eEEecCCC--C-------C---------cccEEEcc-CCcEEEEeCCCccCCcccccccccccCCceEEEEeCCCCeE
Q 018705 124 --VEAIVPDA--S-------F---------TNDVIAAS-DGTLYFTVASTKYTPTDFYKDMAEGKPYGQLRKYDPKLKET 182 (351)
Q Consensus 124 --~~~l~~~~--~-------~---------~n~l~~d~-dG~ly~t~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~~~~ 182 (351)
.+.+.... . . +..+++++ ++.+|++..... .. + ....+.|++.+-.....
T Consensus 202 ~TW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~l~~~~~~~~---~p-----~-~g~~g~l~~S~DgG~tW 272 (789)
T 1sqj_A 202 VSWEPVAGQPSSWLNRTTGAFPDKKPASIAPQPMKVALTPNFLYVTYADYP---GP-----W-GVTFGEVWRQNRTSGAW 272 (789)
T ss_dssp SSCEECTTCCCSCCHHHHHTSTTCCCSSSSCEEEEEEECSSEEEEEEESSC---SS-----S-CCCCCCEEEEETTTCCE
T ss_pred cCcccCCCCcCccccccccccCcccccccccceeEEcCCCCeEEEEEecCC---CC-----C-CCCCceEEEEeCCCCce
Confidence 44443211 1 2 26788888 678888743210 00 0 01245688876554445
Q ss_pred EEe
Q 018705 183 TVL 185 (351)
Q Consensus 183 ~~~ 185 (351)
+.+
T Consensus 273 ~~~ 275 (789)
T 1sqj_A 273 DDI 275 (789)
T ss_dssp EEC
T ss_pred EEC
Confidence 444
No 337
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=75.97 E-value=37 Score=29.09 Aligned_cols=103 Identities=11% Similarity=0.023 Sum_probs=57.1
Q ss_pred CCEEEEEEcCCCeEEEEeecCC-ccccceEEcCCCCEEEEeCC-----CCeEEEcC-CC-eEEecCCC-CCcccEEEccC
Q 018705 72 DGWVKYFILHNETLVNWKHIDS-QSLLGLTTTKDGGVILCDNE-----KGLLKVTE-EG-VEAIVPDA-SFTNDVIAASD 142 (351)
Q Consensus 72 ~g~I~~~d~~~g~~~~~~~~~~-~p~~gl~~d~~G~L~v~d~~-----~gl~~~~~-~g-~~~l~~~~-~~~n~l~~d~d 142 (351)
...++++|+.+++++....... +-..+++. -++.||+.... ..+++++. ++ .+.+.... ..-...++.-+
T Consensus 23 ~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~-~~~~lyv~GG~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~ 101 (306)
T 3ii7_A 23 PQSCRYFNPKDYSWTDIRCPFEKRRDAACVF-WDNVVYILGGSQLFPIKRMDCYNVVKDSWYSKLGPPTPRDSLAACAAE 101 (306)
T ss_dssp TTSEEEEETTTTEEEECCCCSCCCBSCEEEE-ETTEEEEECCBSSSBCCEEEEEETTTTEEEEEECCSSCCBSCEEEEET
T ss_pred CceEEEecCCCCCEecCCCCCcccceeEEEE-ECCEEEEEeCCCCCCcceEEEEeCCCCeEEECCCCCccccceeEEEEC
Confidence 3469999998888876543221 21102222 46778886532 34677775 45 44443321 22222233347
Q ss_pred CcEEEEeCCCccCCcccccccccccCCceEEEEeCCCCeEEEee
Q 018705 143 GTLYFTVASTKYTPTDFYKDMAEGKPYGQLRKYDPKLKETTVLH 186 (351)
Q Consensus 143 G~ly~t~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~~~~~~~~ 186 (351)
+.||+.-.... .......+++||+.+++.+.+.
T Consensus 102 ~~iyv~GG~~~-----------~~~~~~~~~~~d~~~~~W~~~~ 134 (306)
T 3ii7_A 102 GKIYTSGGSEV-----------GNSALYLFECYDTRTESWHTKP 134 (306)
T ss_dssp TEEEEECCBBT-----------TBSCCCCEEEEETTTTEEEEEC
T ss_pred CEEEEECCCCC-----------CCcEeeeEEEEeCCCCceEeCC
Confidence 78888654210 0112346999999988877654
No 338
>3a0f_A Xyloglucanase; beta-propeller, hydrolase; 2.50A {Geotrichum SP}
Probab=75.38 E-value=67 Score=32.11 Aligned_cols=144 Identities=12% Similarity=0.007 Sum_probs=72.8
Q ss_pred eEEEeeCC-CeEEEEEcCCEEEEEEcCCC-eEEEEee-cC---CccccceEEcC--CCCEEEEeCCCCeEEEcCCC--eE
Q 018705 56 DVSVVVSK-GALYTATRDGWVKYFILHNE-TLVNWKH-ID---SQSLLGLTTTK--DGGVILCDNEKGLLKVTEEG--VE 125 (351)
Q Consensus 56 ~i~~d~~~-g~lyv~~~~g~I~~~d~~~g-~~~~~~~-~~---~~p~~gl~~d~--~G~L~v~d~~~gl~~~~~~g--~~ 125 (351)
.|++|+.+ +.+|++ .+|.|++-. +.| .++.+.. .. .... -|++.+ ++.||++....++++-+..| .+
T Consensus 592 ~i~~d~~~~~~~y~g-~~g~v~~S~-DgG~tW~~~~~~lp~~~~~~~-~i~~~~~~~~~l~~~~~~~~l~~S~D~G~tW~ 668 (763)
T 3a0f_A 592 GIAADRVQANTFYVY-VEGDFFVST-DGGKSYTKKGNGLPCCWTYTG-TPVTSNLRAGELWVSVKGVGIYHSTDFGNTFT 668 (763)
T ss_dssp CEEECSSSTTCEEEE-ETTEEEEES-STTSBCEEECBTSCCSSCCCE-EEEECSSSTTCEEEEETTTEEEEESSTTSBCE
T ss_pred eEEEeccCCCEEEEE-cCCCEEEEe-CCCcCccccccCCCcccCccc-cEEECCCCCCcEEEEcCCCeEEEEcCCCCCce
Confidence 67777644 678888 467777653 244 3444421 11 1122 255554 67899998776777766555 55
Q ss_pred EecCCCCCc----c--cEEEc-c-CCcEEEEeCCCccCCcccccccccccCCceEEEEeCCCCeEEEee---cCccccce
Q 018705 126 AIVPDASFT----N--DVIAA-S-DGTLYFTVASTKYTPTDFYKDMAEGKPYGQLRKYDPKLKETTVLH---EGFYFANG 194 (351)
Q Consensus 126 ~l~~~~~~~----n--~l~~d-~-dG~ly~t~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~~~~~~~~---~~~~~~ng 194 (351)
.+....... . ++++. + ...+|+.-.. . ....+.||+-+-.....+.+. ..+..+.-
T Consensus 669 ~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~G~~-~------------~~~~~gl~~S~D~G~tW~~~~~~~~~~~~~~~ 735 (763)
T 3a0f_A 669 ALAGSGSSLNPAVFSIGAPQTPNATETLFLWGIP-S------------ASQPEGLYMSTDNGGLWTRLNDDAHNYGGATV 735 (763)
T ss_dssp ECTTBTTTBEEEEEEEECCSSTTSSCEEEEEEEC-S------------TTSCSEEEEESSTTSCCEECSCTTCCTBCEEE
T ss_pred EccCCCcccccceeEEeeecCCCCCceEEEEEEc-c------------cCCCcEEEEeCCCCCCcEeccCccccCCCcce
Confidence 554211111 0 11112 1 2357765300 0 001356777654434444443 22222335
Q ss_pred EEEcCCC-CEEEEEecceeEEe
Q 018705 195 IALSKNE-DFVVVCESWKRYWL 215 (351)
Q Consensus 195 i~~~~dg-~~lyv~~~~~~~~i 215 (351)
|+.+|.. .+||++..++-+++
T Consensus 736 i~~~p~~~~~v~~~T~GrGi~~ 757 (763)
T 3a0f_A 736 ISGDPRIYGRVYIGMNGRGIIC 757 (763)
T ss_dssp EEECTTSTTEEEEEEBSSCEEE
T ss_pred EEeCCCCCCEEEEeCCCCeEEE
Confidence 7777743 36888776653443
No 339
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=71.80 E-value=49 Score=28.57 Aligned_cols=102 Identities=8% Similarity=0.029 Sum_probs=54.1
Q ss_pred EEEEEEcCCCeEEEEeecC--CccccceEEcCCCCEEEEeCC-----C-------CeEEEcC-CC-eEEecCCC-CCccc
Q 018705 74 WVKYFILHNETLVNWKHID--SQSLLGLTTTKDGGVILCDNE-----K-------GLLKVTE-EG-VEAIVPDA-SFTND 136 (351)
Q Consensus 74 ~I~~~d~~~g~~~~~~~~~--~~p~~gl~~d~~G~L~v~d~~-----~-------gl~~~~~-~g-~~~l~~~~-~~~n~ 136 (351)
.+.++|+.++++....... .+-. .-+.-.++.||+.... . .++++++ ++ .+.+.... .....
T Consensus 25 ~~~~yd~~~~~W~~~~~~~~~~r~~-~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~ 103 (318)
T 2woz_A 25 AAVAYDPMENECYLTALAEQIPRNH-SSIVTQQNQVYVVGGLYVDEENKDQPLQSYFFQLDNVSSEWVGLPPLPSARCLF 103 (318)
T ss_dssp EEEEEETTTTEEEEEEECTTSCSSE-EEEECSSSCEEEEESSCC-------CCCBEEEEEETTTTEEEECSCBSSCBCSC
T ss_pred ceEEECCCCCceecccCCccCCccc-eEEEEECCEEEEECCcccCccccCCCccccEEEEeCCCCcEEECCCCCcccccc
Confidence 3889999888886632221 1222 2223356788886541 0 1667775 44 55443221 11122
Q ss_pred EEEccCCcEEEEeCCCccCCcccccccccccCCceEEEEeCCCCeEEEee
Q 018705 137 VIAASDGTLYFTVASTKYTPTDFYKDMAEGKPYGQLRKYDPKLKETTVLH 186 (351)
Q Consensus 137 l~~d~dG~ly~t~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~~~~~~~~ 186 (351)
-+..-++.||+.-..... .......+++||+.+++.+.+.
T Consensus 104 ~~~~~~~~iyv~GG~~~~----------~~~~~~~~~~yd~~~~~W~~~~ 143 (318)
T 2woz_A 104 GLGEVDDKIYVVAGKDLQ----------TEASLDSVLCYDPVAAKWSEVK 143 (318)
T ss_dssp EEEEETTEEEEEEEEBTT----------TCCEEEEEEEEETTTTEEEEEC
T ss_pred ceEEECCEEEEEcCccCC----------CCcccceEEEEeCCCCCEeECC
Confidence 223336788876432100 0011246999999988887654
No 340
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=67.76 E-value=93 Score=30.22 Aligned_cols=120 Identities=13% Similarity=0.054 Sum_probs=69.9
Q ss_pred CceEEEeeCCCeEEEE-EcC-----------CEEEEEEcCCCeEEEEeecC-C---ccccceEEcCCCCEEEEeCC--CC
Q 018705 54 PEDVSVVVSKGALYTA-TRD-----------GWVKYFILHNETLVNWKHID-S---QSLLGLTTTKDGGVILCDNE--KG 115 (351)
Q Consensus 54 pe~i~~d~~~g~lyv~-~~~-----------g~I~~~d~~~g~~~~~~~~~-~---~p~~gl~~d~~G~L~v~d~~--~g 115 (351)
+.+.++.+.++.+|+. ..+ ..++++|+.+++++...... . .-. +.++..+|+||+.-.. ..
T Consensus 188 ~~~~av~~~~g~l~v~GG~~~~~~~~~~~~~~~~~~yd~~t~~w~~~~~~~~~~~~~~~-~~~~~~~g~lyv~GG~~~~~ 266 (656)
T 1k3i_A 188 PAAAAIEPTSGRVLMWSSYRNDAFGGSPGGITLTSSWDPSTGIVSDRTVTVTKHDMFCP-GISMDGNGQIVVTGGNDAKK 266 (656)
T ss_dssp CSEEEEETTTTEEEEEEECCCTTTCSCCCSEEEEEEECTTTCCBCCCEEEECSCCCSSC-EEEECTTSCEEEECSSSTTC
T ss_pred ceeEEEEecCCEEEEEecccccccccCCCCeEEEEEEeCCCCcEEeCcccCCCCCCccc-cccCCCCCCEEEeCCCCCCc
Confidence 4466666447778763 211 15889999888775443221 1 122 4667789999997643 35
Q ss_pred eEEEcC-CC-eEEecCCC--CCcccEEEccCCcEEEEeCCCccCCcccccccccccCCceEEEEeCCCCeEEEe
Q 018705 116 LLKVTE-EG-VEAIVPDA--SFTNDVIAASDGTLYFTVASTKYTPTDFYKDMAEGKPYGQLRKYDPKLKETTVL 185 (351)
Q Consensus 116 l~~~~~-~g-~~~l~~~~--~~~n~l~~d~dG~ly~t~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~~~~~~~ 185 (351)
+..+++ ++ .+.+.... ..--..++-++|+||+.-.... . ......+.+||+.+++.+.+
T Consensus 267 v~~yd~~t~~W~~~~~~~~~R~~~s~~~~~dg~iyv~GG~~~--~---------~~~~~~~e~yd~~t~~W~~~ 329 (656)
T 1k3i_A 267 TSLYDSSSDSWIPGPDMQVARGYQSSATMSDGRVFTIGGSWS--G---------GVFEKNGEVYSPSSKTWTSL 329 (656)
T ss_dssp EEEEEGGGTEEEECCCCSSCCSSCEEEECTTSCEEEECCCCC--S---------SSCCCCEEEEETTTTEEEEE
T ss_pred eEEecCcCCceeECCCCCccccccceEEecCCeEEEEeCccc--C---------CcccccceEeCCCCCcceeC
Confidence 788885 45 45443221 1222345667899998754210 0 01124588999988877665
No 341
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=66.73 E-value=59 Score=27.60 Aligned_cols=218 Identities=8% Similarity=0.012 Sum_probs=106.2
Q ss_pred CEEEEEEcCCCeEEEEeecCC-ccccceEEcCCCCEEEEeCC------CCeEEEcC-CC----eEEecCCC-CCcccEEE
Q 018705 73 GWVKYFILHNETLVNWKHIDS-QSLLGLTTTKDGGVILCDNE------KGLLKVTE-EG----VEAIVPDA-SFTNDVIA 139 (351)
Q Consensus 73 g~I~~~d~~~g~~~~~~~~~~-~p~~gl~~d~~G~L~v~d~~------~gl~~~~~-~g----~~~l~~~~-~~~n~l~~ 139 (351)
..++++|+.+++++....... +...+.+. -++.||+.... ..+++++. ++ .+.+.... ......++
T Consensus 31 ~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~-~~~~l~v~GG~~~~~~~~~~~~~d~~~~~~~~W~~~~~~p~~r~~~~~~ 109 (301)
T 2vpj_A 31 DVVEKYDPKTQEWSFLPSITRKRRYVASVS-LHDRIYVIGGYDGRSRLSSVECLDYTADEDGVWYSVAPMNVRRGLAGAT 109 (301)
T ss_dssp CCEEEEETTTTEEEECCCCSSCCBSCEEEE-ETTEEEEECCBCSSCBCCCEEEEETTCCTTCCCEEECCCSSCCBSCEEE
T ss_pred eEEEEEcCCCCeEEeCCCCChhhccccEEE-ECCEEEEEcCCCCCccCceEEEEECCCCCCCeeEECCCCCCCccceeEE
Confidence 458999998888876543221 21102222 45788886432 24777774 21 34443221 22222233
Q ss_pred ccCCcEEEEeCCCccCCcccccccccccCCceEEEEeCCCCeEEEeecCc--cccceEEEcCCCCEEEEEec-c-----e
Q 018705 140 ASDGTLYFTVASTKYTPTDFYKDMAEGKPYGQLRKYDPKLKETTVLHEGF--YFANGIALSKNEDFVVVCES-W-----K 211 (351)
Q Consensus 140 d~dG~ly~t~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~~~~~~~~~~~--~~~ngi~~~~dg~~lyv~~~-~-----~ 211 (351)
.-++.||+.-.... ......+++||+.+++.+.+..-. .....++. -+++ +|+.-- . +
T Consensus 110 ~~~~~lyv~GG~~~------------~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~-~~~~-iyv~GG~~~~~~~~ 175 (301)
T 2vpj_A 110 TLGDMIYVSGGFDG------------SRRHTSMERYDPNIDQWSMLGDMQTAREGAGLVV-ASGV-IYCLGGYDGLNILN 175 (301)
T ss_dssp EETTEEEEECCBCS------------SCBCCEEEEEETTTTEEEEEEECSSCCBSCEEEE-ETTE-EEEECCBCSSCBCC
T ss_pred EECCEEEEEcccCC------------CcccceEEEEcCCCCeEEECCCCCCCcccceEEE-ECCE-EEEECCCCCCcccc
Confidence 34678888654210 011347999999988877654321 11122333 2444 776421 1 1
Q ss_pred eEEeecCCCCceeEEeccCCCCCC---ceEECCCCCEEEEEecCCchhhhhhhcChhHHHHHHhccchhhcccCCCCCCc
Q 018705 212 RYWLKGDRAGILDAFIENLPGGPD---NINLAPDGSFWIGLIKMNQTGVRAIQKCREKWELLDAYPGLISLLLPMGSDAG 288 (351)
Q Consensus 212 ~~~i~~~~~~~~~~~~~~~~g~pd---~i~~d~~G~lwva~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 288 (351)
.++.-+....+.+... .+|. +. .++. -++.||+-.+.... ...
T Consensus 176 ~~~~~d~~~~~W~~~~-~~p~-~r~~~~~~~-~~~~i~v~GG~~~~-------------------------------~~~ 221 (301)
T 2vpj_A 176 SVEKYDPHTGHWTNVT-PMAT-KRSGAGVAL-LNDHIYVVGGFDGT-------------------------------AHL 221 (301)
T ss_dssp CEEEEETTTTEEEEEC-CCSS-CCBSCEEEE-ETTEEEEECCBCSS-------------------------------SBC
T ss_pred eEEEEeCCCCcEEeCC-CCCc-ccccceEEE-ECCEEEEEeCCCCC-------------------------------ccc
Confidence 2222222233433332 2221 11 1222 25678886543210 001
Q ss_pred eEEEEEECCCCeEEEEEEC-CCCCcccceeEEEEECCEEEEEecCC-----CeEEEEeCCC
Q 018705 289 ARVVKVDGNDGKIIRDFND-PDATYISFVTSAAEFDGNLYLASLQS-----NFIGILPLDG 343 (351)
Q Consensus 289 ~~v~~~~~~~g~~~~~~~~-~~g~~~~~~~~~~~~~g~L~ig~~~~-----~~i~~~~~~~ 343 (351)
..+.+||+++.+.. .+.. |..+ .-.+++..+++||+-.... +.+.++++.+
T Consensus 222 ~~v~~yd~~~~~W~-~~~~~p~~r---~~~~~~~~~~~i~v~GG~~~~~~~~~v~~yd~~~ 278 (301)
T 2vpj_A 222 SSVEAYNIRTDSWT-TVTSMTTPR---CYVGATVLRGRLYAIAGYDGNSLLSSIECYDPII 278 (301)
T ss_dssp CCEEEEETTTTEEE-EECCCSSCC---BSCEEEEETTEEEEECCBCSSSBEEEEEEEETTT
T ss_pred ceEEEEeCCCCcEE-ECCCCCCcc---cceeEEEECCEEEEEcCcCCCcccccEEEEcCCC
Confidence 35889999445543 3432 3322 2334555688888865322 4567777654
No 342
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=64.62 E-value=36 Score=32.97 Aligned_cols=76 Identities=11% Similarity=0.130 Sum_probs=44.8
Q ss_pred EEEEEEcCC----C-eEEEEeecCCccccceEEcCCCCEEEEeCC-CC-eEEEc--C-----CC-e----E-EecCC-C-
Q 018705 74 WVKYFILHN----E-TLVNWKHIDSQSLLGLTTTKDGGVILCDNE-KG-LLKVT--E-----EG-V----E-AIVPD-A- 131 (351)
Q Consensus 74 ~I~~~d~~~----g-~~~~~~~~~~~p~~gl~~d~~G~L~v~d~~-~g-l~~~~--~-----~g-~----~-~l~~~-~- 131 (351)
++-.+|.+. + ....+......|+ |+.++|||+-+++... .. +..++ + ++ + . ..+.. .
T Consensus 299 gv~ViD~~~~~~~~~~~~~~iP~pksPH-Gv~vsPDGkyi~v~GKLsptvtV~d~~k~~~~~~~k~~~~~~~~~ae~e~G 377 (638)
T 3sbq_A 299 KTPVLDGRKKDGKDSKFTRYVPVPKNPH-GCNTSSDGKYFIAAGKLSPTCSMIAIDKLPDLFAGKLADPRDVIVGEPELG 377 (638)
T ss_dssp CCCEEECSCBTTBCCSSEEEEEESSSCC-CEEECTTSCEEEEECTTSSBEEEEEGGGHHHHHTTCCSCGGGGEEECCBCC
T ss_pred CeeEEccccccccCCceEEEEeCCCCCc-ceeeCCCCCEEEEcCCCCCeEEEEEeehhhhhhhccccCcccceEeeccCC
Confidence 355566543 1 2344455667899 9999999976665543 22 33332 1 11 1 0 01111 1
Q ss_pred CCcccEEEccCCcEEEEeC
Q 018705 132 SFTNDVIAASDGTLYFTVA 150 (351)
Q Consensus 132 ~~~n~l~~d~dG~ly~t~~ 150 (351)
..|-..++|++|+.|.|-.
T Consensus 378 lGPlHt~Fd~~G~aYTtlf 396 (638)
T 3sbq_A 378 LGPLHTTFDGRGNAYTTLF 396 (638)
T ss_dssp SCEEEEEECSSSEEEEEET
T ss_pred CcccEEEECCCCceEeeee
Confidence 6788999999999887753
No 343
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=63.38 E-value=69 Score=27.21 Aligned_cols=101 Identities=13% Similarity=0.064 Sum_probs=55.3
Q ss_pred CEEEEEEcCCCeEEEEeecCC-ccccceEEcCCCCEEEEeCC------CCeEEEcC-CC-eEEecCCC-CCcccEEEccC
Q 018705 73 GWVKYFILHNETLVNWKHIDS-QSLLGLTTTKDGGVILCDNE------KGLLKVTE-EG-VEAIVPDA-SFTNDVIAASD 142 (351)
Q Consensus 73 g~I~~~d~~~g~~~~~~~~~~-~p~~gl~~d~~G~L~v~d~~------~gl~~~~~-~g-~~~l~~~~-~~~n~l~~d~d 142 (351)
..++++|+.+++++....... +-..+++. -++.||+.... ..+++++. +. .+.+.... ..-..-++.-+
T Consensus 30 ~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~-~~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~ 108 (302)
T 2xn4_A 30 RSVECYDFKEERWHQVAELPSRRCRAGMVY-MAGLVFAVGGFNGSLRVRTVDSYDPVKDQWTSVANMRDRRSTLGAAVLN 108 (302)
T ss_dssp CCEEEEETTTTEEEEECCCSSCCBSCEEEE-ETTEEEEESCBCSSSBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEET
T ss_pred CcEEEEcCcCCcEeEcccCCcccccceEEE-ECCEEEEEeCcCCCccccceEEECCCCCceeeCCCCCccccceEEEEEC
Confidence 348899998888776533221 11102322 36788886432 24777875 45 55554321 12222233346
Q ss_pred CcEEEEeCCCccCCcccccccccccCCceEEEEeCCCCeEEEee
Q 018705 143 GTLYFTVASTKYTPTDFYKDMAEGKPYGQLRKYDPKLKETTVLH 186 (351)
Q Consensus 143 G~ly~t~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~~~~~~~~ 186 (351)
|.||+.-.... ......+++||+.+++.+.+.
T Consensus 109 ~~iyv~GG~~~------------~~~~~~~~~~d~~~~~W~~~~ 140 (302)
T 2xn4_A 109 GLLYAVGGFDG------------STGLSSVEAYNIKSNEWFHVA 140 (302)
T ss_dssp TEEEEEEEECS------------SCEEEEEEEEETTTTEEEEEC
T ss_pred CEEEEEcCCCC------------CccCceEEEEeCCCCeEeecC
Confidence 78887643210 011246999999988887664
No 344
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=62.63 E-value=74 Score=27.29 Aligned_cols=101 Identities=7% Similarity=-0.091 Sum_probs=56.1
Q ss_pred CEEEEEEcCCCeEEEEeecC-CccccceEEcCCCCEEEEeCC-------CCeEEEcC-CC-eEEecCCC-CCcccEEEcc
Q 018705 73 GWVKYFILHNETLVNWKHID-SQSLLGLTTTKDGGVILCDNE-------KGLLKVTE-EG-VEAIVPDA-SFTNDVIAAS 141 (351)
Q Consensus 73 g~I~~~d~~~g~~~~~~~~~-~~p~~gl~~d~~G~L~v~d~~-------~gl~~~~~-~g-~~~l~~~~-~~~n~l~~d~ 141 (351)
..++++|+.+++++...... .+-. .-+.--++.||+.... ..+.++++ +. .+.+.... .....-++.-
T Consensus 117 ~~~~~~d~~~~~W~~~~~~p~~r~~-~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~ 195 (315)
T 4asc_A 117 DSVMCYDRLSFKWGESDPLPYVVYG-HTVLSHMDLVYVIGGKGSDRKCLNKMCVYDPKKFEWKELAPMQTARSLFGATVH 195 (315)
T ss_dssp CCEEEEETTTTEEEECCCCSSCCBS-CEEEEETTEEEEECCBCTTSCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEE
T ss_pred ceEEEECCCCCcEeECCCCCCcccc-eeEEEECCEEEEEeCCCCCCcccceEEEEeCCCCeEEECCCCCCchhceEEEEE
Confidence 45899999888887654322 1211 1222246788887543 24777775 44 55443221 1222223334
Q ss_pred CCcEEEEeCCCccCCcccccccccccCCceEEEEeCCCCeEEEee
Q 018705 142 DGTLYFTVASTKYTPTDFYKDMAEGKPYGQLRKYDPKLKETTVLH 186 (351)
Q Consensus 142 dG~ly~t~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~~~~~~~~ 186 (351)
++.||+.-....- .....+++||+++++.+.+.
T Consensus 196 ~~~iyv~GG~~~~------------~~~~~~~~yd~~~~~W~~~~ 228 (315)
T 4asc_A 196 DGRIIVAAGVTDT------------GLTSSAEVYSITDNKWAPFE 228 (315)
T ss_dssp TTEEEEEEEECSS------------SEEEEEEEEETTTTEEEEEC
T ss_pred CCEEEEEeccCCC------------CccceEEEEECCCCeEEECC
Confidence 6788876532100 01236999999988877664
No 345
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=47.98 E-value=1.4e+02 Score=25.97 Aligned_cols=87 Identities=9% Similarity=0.091 Sum_probs=46.3
Q ss_pred CCeEEEE--EcCCEEEEEEcCC--CeEEEEeecC--CccccceEEcCCCCEEEEeCC-----------CCeEEEcC-CC-
Q 018705 63 KGALYTA--TRDGWVKYFILHN--ETLVNWKHID--SQSLLGLTTTKDGGVILCDNE-----------KGLLKVTE-EG- 123 (351)
Q Consensus 63 ~g~lyv~--~~~g~I~~~d~~~--g~~~~~~~~~--~~p~~gl~~d~~G~L~v~d~~-----------~gl~~~~~-~g- 123 (351)
++.+|+. .....++++|+.+ .+++...... .+-..+++. -++.|||.-.. ..+++++. +.
T Consensus 19 ~~~iyv~GG~~~~~~~~~d~~~~~~~W~~~~~~p~~~R~~~~~~~-~~~~lyv~GG~~~~~~~~~~~~~~v~~yd~~~~~ 97 (357)
T 2uvk_A 19 NDTVYIGLGSAGTAWYKLDTQAKDKKWTALAAFPGGPRDQATSAF-IDGNLYVFGGIGKNSEGLTQVFNDVHKYNPKTNS 97 (357)
T ss_dssp TTEEEEECGGGTTCEEEEETTSSSCCEEECCCCTTCCCBSCEEEE-ETTEEEEECCEEECTTSCEEECCCEEEEETTTTE
T ss_pred CCEEEEEeCcCCCeEEEEccccCCCCeeECCCCCCCcCccceEEE-ECCEEEEEcCCCCCCCccceeeccEEEEeCCCCc
Confidence 6778773 2345799999863 6676654322 221102222 36789886432 24677775 44
Q ss_pred eEEecCC--CCCcccEEEccCCcEEEEeC
Q 018705 124 VEAIVPD--ASFTNDVIAASDGTLYFTVA 150 (351)
Q Consensus 124 ~~~l~~~--~~~~n~l~~d~dG~ly~t~~ 150 (351)
.+.+... ......-++..+|.||+--.
T Consensus 98 W~~~~~~~p~~r~~~~~~~~~~~iyv~GG 126 (357)
T 2uvk_A 98 WVKLMSHAPMGMAGHVTFVHNGKAYVTGG 126 (357)
T ss_dssp EEECSCCCSSCCSSEEEEEETTEEEEEEC
T ss_pred EEECCCCCCcccccceEEEECCEEEEEeC
Confidence 4544332 11122222336788988654
No 346
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=47.12 E-value=1.4e+02 Score=25.59 Aligned_cols=111 Identities=13% Similarity=0.131 Sum_probs=60.4
Q ss_pred CCeEEE-EEcC-------CEEEEEEcCCCeEEEEeecC-CccccceEEcCCCCEEEEeCC-------CCeEEEcC-CC-e
Q 018705 63 KGALYT-ATRD-------GWVKYFILHNETLVNWKHID-SQSLLGLTTTKDGGVILCDNE-------KGLLKVTE-EG-V 124 (351)
Q Consensus 63 ~g~lyv-~~~~-------g~I~~~d~~~g~~~~~~~~~-~~p~~gl~~d~~G~L~v~d~~-------~gl~~~~~-~g-~ 124 (351)
++.+|+ |..+ ..++++|+.+.+++...... .+-..+.+. -++.||+.... ..++.++. +. .
T Consensus 109 ~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W 187 (318)
T 2woz_A 109 DDKIYVVAGKDLQTEASLDSVLCYDPVAAKWSEVKNLPIKVYGHNVIS-HNGMIYCLGGKTDDKKCTNRVFIYNPKKGDW 187 (318)
T ss_dssp TTEEEEEEEEBTTTCCEEEEEEEEETTTTEEEEECCCSSCEESCEEEE-ETTEEEEECCEESSSCBCCCEEEEETTTTEE
T ss_pred CCEEEEEcCccCCCCcccceEEEEeCCCCCEeECCCCCCcccccEEEE-ECCEEEEEcCCCCCCCccceEEEEcCCCCEE
Confidence 566776 3221 35889999888887654322 111102222 57788886431 24778885 45 5
Q ss_pred EEecCCC-CCcccEEEccCCcEEEEeCCCccCCcccccccccccCCceEEEEeCCCCeEEEee
Q 018705 125 EAIVPDA-SFTNDVIAASDGTLYFTVASTKYTPTDFYKDMAEGKPYGQLRKYDPKLKETTVLH 186 (351)
Q Consensus 125 ~~l~~~~-~~~n~l~~d~dG~ly~t~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~~~~~~~~ 186 (351)
+.+.... .....-++.-++.||+--....- .....+++||+++++.+.+.
T Consensus 188 ~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~------------~~~~~~~~yd~~~~~W~~~~ 238 (318)
T 2woz_A 188 KDLAPMKTPRSMFGVAIHKGKIVIAGGVTED------------GLSASVEAFDLKTNKWEVMT 238 (318)
T ss_dssp EEECCCSSCCBSCEEEEETTEEEEEEEEETT------------EEEEEEEEEETTTCCEEECC
T ss_pred EECCCCCCCcccceEEEECCEEEEEcCcCCC------------CccceEEEEECCCCeEEECC
Confidence 5543321 11122233346788876532100 01246899999988877653
No 347
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=46.22 E-value=2.2e+02 Score=27.87 Aligned_cols=130 Identities=9% Similarity=0.073 Sum_probs=72.2
Q ss_pred CCCeEEE-EE----cCCEEEEEEcCCCeEEEEe-e------cCCcc-ccceEEcC-CCCEEEEeCC-------CCeEEEc
Q 018705 62 SKGALYT-AT----RDGWVKYFILHNETLVNWK-H------IDSQS-LLGLTTTK-DGGVILCDNE-------KGLLKVT 120 (351)
Q Consensus 62 ~~g~lyv-~~----~~g~I~~~d~~~g~~~~~~-~------~~~~p-~~gl~~d~-~G~L~v~d~~-------~gl~~~~ 120 (351)
.++.+|+ |. ....++++|+.+++++... . +..+- + +.+.-. +|.||+.... ..+++++
T Consensus 396 ~~~~iyv~GG~~~~~~~~v~~yd~~~~~W~~~~~~~p~~~~p~~R~~h-s~~~~~~~~~lyv~GG~~~~~~~~~dv~~yd 474 (695)
T 2zwa_A 396 AGNDVFYMGGSNPYRVNEILQLSIHYDKIDMKNIEVSSSEVPVARMCH-TFTTISRNNQLLLIGGRKAPHQGLSDNWIFD 474 (695)
T ss_dssp CSSCEEEECCBSSSBCCCEEEEEECSSCEEEEECCCCCSCCCCCCBSC-EEEEETTTTEEEEECCBSSTTCBCCCCEEEE
T ss_pred ECCEEEEECCCCCCCcCcEEEEECCCCeEEEeccCCCCCCCCccccce-EEEEEccCCEEEEEcCCCCCCCccccEEEEe
Confidence 3566776 32 1245899999889887765 2 11221 2 344434 7889987432 2467777
Q ss_pred C-CC-eEEecCCC-CCcc-cEEEccCCcEEEEeCCCccCCcccccccccccCCceEEEEeCCCCeEEEeecC--cc----
Q 018705 121 E-EG-VEAIVPDA-SFTN-DVIAASDGTLYFTVASTKYTPTDFYKDMAEGKPYGQLRKYDPKLKETTVLHEG--FY---- 190 (351)
Q Consensus 121 ~-~g-~~~l~~~~-~~~n-~l~~d~dG~ly~t~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~~~~~~~~~~--~~---- 190 (351)
. +. .+.+.... ..-. ..++-.+|.||+--.... .+.+++||+.+++.+.+... ..
T Consensus 475 ~~t~~W~~~~~~p~~R~~h~~~~~~~~~iyv~GG~~~---------------~~~v~~yd~~t~~W~~~~~~g~~p~~r~ 539 (695)
T 2zwa_A 475 MKTREWSMIKSLSHTRFRHSACSLPDGNVLILGGVTE---------------GPAMLLYNVTEEIFKDVTPKDEFFQNSL 539 (695)
T ss_dssp TTTTEEEECCCCSBCCBSCEEEECTTSCEEEECCBCS---------------SCSEEEEETTTTEEEECCCSSGGGGSCC
T ss_pred CCCCcEEECCCCCCCcccceEEEEcCCEEEEECCCCC---------------CCCEEEEECCCCceEEccCCCCCCCccc
Confidence 5 44 55443221 1122 233324788998654210 11699999999888776532 11
Q ss_pred ccceEEEcCCCCEEEEE
Q 018705 191 FANGIALSKNEDFVVVC 207 (351)
Q Consensus 191 ~~ngi~~~~dg~~lyv~ 207 (351)
....++++.+.+.+|+.
T Consensus 540 ~~~a~v~~~~~~~iyv~ 556 (695)
T 2zwa_A 540 VSAGLEFDPVSKQGIIL 556 (695)
T ss_dssp BSCEEEEETTTTEEEEE
T ss_pred ceeEEEEeCCCCEEEEE
Confidence 11225556553457774
No 348
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=45.46 E-value=46 Score=32.30 Aligned_cols=81 Identities=12% Similarity=0.048 Sum_probs=49.5
Q ss_pred eEEEEeCCC----C-eEEEeecCccccceEEEcCCCCEEEEEecce----eEEeec------CCC-Cc-eeEEec-cCCC
Q 018705 171 QLRKYDPKL----K-ETTVLHEGFYFANGIALSKNEDFVVVCESWK----RYWLKG------DRA-GI-LDAFIE-NLPG 232 (351)
Q Consensus 171 ~l~~~d~~~----~-~~~~~~~~~~~~ngi~~~~dg~~lyv~~~~~----~~~i~~------~~~-~~-~~~~~~-~~~g 232 (351)
++-.+|+.. + .+..+...-..|.|+.++|||++++++.-.. .|.+.. .+. .- -.+..+ .+.-
T Consensus 299 gv~ViD~~~~~~~~~~~~~~iP~pksPHGv~vsPDGkyi~v~GKLsptvtV~d~~k~~~~~~~k~~~~~~~~~ae~e~Gl 378 (638)
T 3sbq_A 299 KTPVLDGRKKDGKDSKFTRYVPVPKNPHGCNTSSDGKYFIAAGKLSPTCSMIAIDKLPDLFAGKLADPRDVIVGEPELGL 378 (638)
T ss_dssp CCCEEECSCBTTBCCSSEEEEEESSSCCCEEECTTSCEEEEECTTSSBEEEEEGGGHHHHHTTCCSCGGGGEEECCBCCS
T ss_pred CeeEEccccccccCCceEEEEeCCCCCcceeeCCCCCEEEEcCCCCCeEEEEEeehhhhhhhccccCcccceEeeccCCC
Confidence 467777754 1 3444445567899999999999888887544 344331 111 00 111222 1222
Q ss_pred CCCceEECCCCCEEEEEec
Q 018705 233 GPDNINLAPDGSFWIGLIK 251 (351)
Q Consensus 233 ~pd~i~~d~~G~lwva~~~ 251 (351)
.|--.++|.+|+.|.+.+.
T Consensus 379 GPlHt~Fd~~G~aYTtlfi 397 (638)
T 3sbq_A 379 GPLHTTFDGRGNAYTTLFI 397 (638)
T ss_dssp CEEEEEECSSSEEEEEETT
T ss_pred cccEEEECCCCceEeeeee
Confidence 4666799999999999864
No 349
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=44.38 E-value=1.4e+02 Score=25.07 Aligned_cols=50 Identities=12% Similarity=0.124 Sum_probs=28.7
Q ss_pred EEEEEECCCCeEEEEEEC-CCCCcccceeEEEEECCEEEEEecC-----CCeEEEEeCCC
Q 018705 290 RVVKVDGNDGKIIRDFND-PDATYISFVTSAAEFDGNLYLASLQ-----SNFIGILPLDG 343 (351)
Q Consensus 290 ~v~~~~~~~g~~~~~~~~-~~g~~~~~~~~~~~~~g~L~ig~~~-----~~~i~~~~~~~ 343 (351)
.+.+||+++.+.. .+.. |..+ .-++++..+++||+-... .+.+.++++.+
T Consensus 176 ~~~~~d~~~~~W~-~~~~~p~~r---~~~~~~~~~~~i~v~GG~~~~~~~~~v~~yd~~~ 231 (301)
T 2vpj_A 176 SVEKYDPHTGHWT-NVTPMATKR---SGAGVALLNDHIYVVGGFDGTAHLSSVEAYNIRT 231 (301)
T ss_dssp CEEEEETTTTEEE-EECCCSSCC---BSCEEEEETTEEEEECCBCSSSBCCCEEEEETTT
T ss_pred eEEEEeCCCCcEE-eCCCCCccc---ccceEEEECCEEEEEeCCCCCcccceEEEEeCCC
Confidence 4889999555543 3322 2222 233455568888876532 34577787654
No 350
>3f6k_A Sortilin; protein sorting receptor, 10-bladed beta-propeller, Cys-rich ssortilin, sortilin VPS10P-D, protein-peptide complex, DEVE protein; HET: NAG BMA PGE; 2.00A {Homo sapiens}
Probab=35.32 E-value=2.5e+02 Score=27.69 Aligned_cols=73 Identities=14% Similarity=0.079 Sum_probs=42.4
Q ss_pred ceEEEeeCC-CeEEEEEc------CCEEEEEEcCCC-eEEEEeecCCccccceEEcCC--CCEEEEeCCCCeEEEcCCC-
Q 018705 55 EDVSVVVSK-GALYTATR------DGWVKYFILHNE-TLVNWKHIDSQSLLGLTTTKD--GGVILCDNEKGLLKVTEEG- 123 (351)
Q Consensus 55 e~i~~d~~~-g~lyv~~~------~g~I~~~d~~~g-~~~~~~~~~~~p~~gl~~d~~--G~L~v~d~~~gl~~~~~~g- 123 (351)
.+|+++|.+ +.+|++.. .+.|++=+- .| .++.... ...+...|++++. +.||++....++++=...|
T Consensus 93 ~~IavdP~dp~~vyvag~~~~~~~~g~v~rS~D-gG~TW~~~~~-p~~~~~~l~~~P~~~~~l~a~~~~~gly~S~DgG~ 170 (685)
T 3f6k_A 93 FGMAIGPENSGKVVLTAEVSGGSRGGRIFRSSD-FAKNFVQTDL-PFHPLTQMMYSPQNSDYLLALSTENGLWVSKNFGG 170 (685)
T ss_dssp GCEEECSTTCCCEEEEECCCTTCSSCEEEEESS-TTSSCEEEEC-SSCBSSCCEEETTEEEEEEEEBTTCCEEEESSTTS
T ss_pred eEEEECCCCCCEEEEEEeccCCCCCceEEEECC-CCceeEeccC-CCCCceEEEEecCCCCEEEEEECCCCEEEEeCCCC
Confidence 478999755 36766553 577777643 34 4555432 2223215888864 3577776566777755545
Q ss_pred -eEEecC
Q 018705 124 -VEAIVP 129 (351)
Q Consensus 124 -~~~l~~ 129 (351)
.+.+..
T Consensus 171 TW~~i~~ 177 (685)
T 3f6k_A 171 KWEEIHK 177 (685)
T ss_dssp SEEEEES
T ss_pred CcEEeec
Confidence 454443
No 351
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=33.48 E-value=2.2e+02 Score=24.08 Aligned_cols=101 Identities=10% Similarity=0.101 Sum_probs=55.5
Q ss_pred CEEEEEEcCCCeEEEEeecC-CccccceEEcCCCCEEEEeC------CCCeEEEcC-CC-eEEecCCC-CCcccEEEccC
Q 018705 73 GWVKYFILHNETLVNWKHID-SQSLLGLTTTKDGGVILCDN------EKGLLKVTE-EG-VEAIVPDA-SFTNDVIAASD 142 (351)
Q Consensus 73 g~I~~~d~~~g~~~~~~~~~-~~p~~gl~~d~~G~L~v~d~------~~gl~~~~~-~g-~~~l~~~~-~~~n~l~~d~d 142 (351)
..++++|+.+++++...... .+-..+++. -+|.||+... ...+.+++. +. .+.+.... ..-..-++.-+
T Consensus 90 ~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~ 168 (308)
T 1zgk_A 90 SALDCYNPMTNQWSPCAPMSVPRNRIGVGV-IDGHIYAVGGSHGCIHHNSVERYEPERDEWHLVAPMLTRRIGVGVAVLN 168 (308)
T ss_dssp CCEEEEETTTTEEEECCCCSSCCBTCEEEE-ETTEEEEECCEETTEECCCEEEEETTTTEEEECCCCSSCCBSCEEEEET
T ss_pred ceEEEECCCCCeEeECCCCCcCccccEEEE-ECCEEEEEcCCCCCcccccEEEECCCCCeEeECCCCCccccceEEEEEC
Confidence 45899999888887654322 121102222 3678888743 135777775 44 55443221 11111222236
Q ss_pred CcEEEEeCCCccCCcccccccccccCCceEEEEeCCCCeEEEee
Q 018705 143 GTLYFTVASTKYTPTDFYKDMAEGKPYGQLRKYDPKLKETTVLH 186 (351)
Q Consensus 143 G~ly~t~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~~~~~~~~ 186 (351)
+.||+--..... .....+++||+.+++.+.+.
T Consensus 169 ~~iyv~GG~~~~------------~~~~~~~~yd~~~~~W~~~~ 200 (308)
T 1zgk_A 169 RLLYAVGGFDGT------------NRLNSAECYYPERNEWRMIT 200 (308)
T ss_dssp TEEEEECCBCSS------------CBCCCEEEEETTTTEEEECC
T ss_pred CEEEEEeCCCCC------------CcCceEEEEeCCCCeEeeCC
Confidence 788876432100 11346999999988877654
No 352
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=31.96 E-value=2.3e+02 Score=23.78 Aligned_cols=111 Identities=13% Similarity=0.124 Sum_probs=60.1
Q ss_pred CCeEEE-EEcC-----CEEEEEEcCCCeEEEEeecCC-ccccceEEcCCCCEEEEeC--------CCCeEEEcC-CC-eE
Q 018705 63 KGALYT-ATRD-----GWVKYFILHNETLVNWKHIDS-QSLLGLTTTKDGGVILCDN--------EKGLLKVTE-EG-VE 125 (351)
Q Consensus 63 ~g~lyv-~~~~-----g~I~~~d~~~g~~~~~~~~~~-~p~~gl~~d~~G~L~v~d~--------~~gl~~~~~-~g-~~ 125 (351)
++.+|+ |..+ ..++++|+.+++++....... +-..+.+. -++.||+... ...+.+++. ++ .+
T Consensus 108 ~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~ 186 (302)
T 2xn4_A 108 NGLLYAVGGFDGSTGLSSVEAYNIKSNEWFHVAPMNTRRSSVGVGV-VGGLLYAVGGYDVASRQCLSTVECYNATTNEWT 186 (302)
T ss_dssp TTEEEEEEEECSSCEEEEEEEEETTTTEEEEECCCSSCCBSCEEEE-ETTEEEEECCEETTTTEECCCEEEEETTTTEEE
T ss_pred CCEEEEEcCCCCCccCceEEEEeCCCCeEeecCCCCCcccCceEEE-ECCEEEEEeCCCCCCCccccEEEEEeCCCCcEE
Confidence 566765 3222 358899998888876643221 11102222 3678888642 234777775 45 45
Q ss_pred EecCCC-CCcccEEEccCCcEEEEeCCCccCCcccccccccccCCceEEEEeCCCCeEEEee
Q 018705 126 AIVPDA-SFTNDVIAASDGTLYFTVASTKYTPTDFYKDMAEGKPYGQLRKYDPKLKETTVLH 186 (351)
Q Consensus 126 ~l~~~~-~~~n~l~~d~dG~ly~t~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~~~~~~~~ 186 (351)
.+.... ..-..-++.-++.||+--.... ......+++||+.+++.+.+.
T Consensus 187 ~~~~~p~~r~~~~~~~~~~~iyv~GG~~~------------~~~~~~~~~yd~~~~~W~~~~ 236 (302)
T 2xn4_A 187 YIAEMSTRRSGAGVGVLNNLLYAVGGHDG------------PLVRKSVEVYDPTTNAWRQVA 236 (302)
T ss_dssp EECCCSSCCBSCEEEEETTEEEEECCBSS------------SSBCCCEEEEETTTTEEEEEC
T ss_pred ECCCCccccccccEEEECCEEEEECCCCC------------CcccceEEEEeCCCCCEeeCC
Confidence 443221 1112222334678888653210 011346999999988877654
No 353
>2xzh_A Clathrin heavy chain 1; endocytosis, endocytosis inhibition; HET: VH2; 1.69A {Homo sapiens} PDB: 2xzg_A* 3gc3_B 1utc_A 3gd1_I 1c9i_A 1c9l_A
Probab=28.65 E-value=3.2e+02 Score=24.50 Aligned_cols=45 Identities=13% Similarity=0.345 Sum_probs=34.6
Q ss_pred cCCCceEEEeeCCCeEEEEEcCCEEEEEEcCCCeEEEEeecCCcc
Q 018705 51 VNHPEDVSVVVSKGALYTATRDGWVKYFILHNETLVNWKHIDSQS 95 (351)
Q Consensus 51 ~~~pe~i~~d~~~g~lyv~~~~g~I~~~d~~~g~~~~~~~~~~~p 95 (351)
..-|-++.++++-|.+|+-+.-|-|+.+|..+|..--.......+
T Consensus 259 ~DFPVamqvs~kygviyviTK~G~ihlyDleTgt~i~~nrIS~d~ 303 (365)
T 2xzh_A 259 NDFPVAMQISEKHDVVFLITKYGYIHLYDLETGTCIYMNRISGET 303 (365)
T ss_dssp TCCEEEEEEETTTTEEEEEETTSEEEEEETTTCCEEEEEECCSSC
T ss_pred CCceEEEEecccCCEEEEEeCCcEEEEEEcccCcEEEEeccCCCc
Confidence 456889999978899999999999999999888653333333333
No 354
>3hx6_A Type 4 fimbrial biogenesis protein PILY1; beta propeller, pilus protein, cell adhesion; 2.10A {Pseudomonas aeruginosa}
Probab=26.07 E-value=3.6e+02 Score=25.86 Aligned_cols=58 Identities=16% Similarity=0.104 Sum_probs=39.6
Q ss_pred ceEEEEEECCCCeEEEEEECCCC-CcccceeEEEEE--C-----CEEEEEecCCCeEEEEeCCCCCC
Q 018705 288 GARVVKVDGNDGKIIRDFNDPDA-TYISFVTSAAEF--D-----GNLYLASLQSNFIGILPLDGPEP 346 (351)
Q Consensus 288 ~~~v~~~~~~~g~~~~~~~~~~g-~~~~~~~~~~~~--~-----g~L~ig~~~~~~i~~~~~~~~~~ 346 (351)
...|+.+|.++|+.+..+..+.+ .....++..... + +.+|.|.. .+.+.||++++..|
T Consensus 222 ~~~Lyv~d~~tG~li~~i~~~~~~~~~~Gls~~~~~D~d~Dg~~D~~YaGDl-~GnlWRfDl~~~~~ 287 (570)
T 3hx6_A 222 KAALLIIDMETGAITRKLEVTGRTGVPNGLSSPRLADNNSDGVADYAYAGDL-QGNLWRFDLIAGKV 287 (570)
T ss_dssp CEEEEEEETTTCCEEEEEEECCSTTSCCCEEEEEEECTTSSSBCCEEEEEET-TSEEEEEECSCSSC
T ss_pred ccEEEEEECCCCceEEEEecCCCCccCCccccceEEecCCCCceeEEEEEeC-CCcEEEEEcCCCCc
Confidence 35799999878999888864321 112234444322 1 68999998 66699999998765
No 355
>3f6k_A Sortilin; protein sorting receptor, 10-bladed beta-propeller, Cys-rich ssortilin, sortilin VPS10P-D, protein-peptide complex, DEVE protein; HET: NAG BMA PGE; 2.00A {Homo sapiens}
Probab=25.58 E-value=4.9e+02 Score=25.59 Aligned_cols=75 Identities=7% Similarity=0.049 Sum_probs=38.6
Q ss_pred CCEEEEEEcCCCeEEEEeecCCc-----cccceEEcCC--CCEEEEeC------CCCeEEEcCCC--eEEecCCCCCcc-
Q 018705 72 DGWVKYFILHNETLVNWKHIDSQ-----SLLGLTTTKD--GGVILCDN------EKGLLKVTEEG--VEAIVPDASFTN- 135 (351)
Q Consensus 72 ~g~I~~~d~~~g~~~~~~~~~~~-----p~~gl~~d~~--G~L~v~d~------~~gl~~~~~~g--~~~l~~~~~~~n- 135 (351)
.++|+|-+-.+..++.+...... .. .|++|+. +++|++.. ..++++=...| .+.+... ..+.
T Consensus 64 ~ggvyrS~DgG~TW~~v~~~~~~~~~~~~~-~IavdP~dp~~vyvag~~~~~~~~g~v~rS~DgG~TW~~~~~p-~~~~~ 141 (685)
T 3f6k_A 64 QSKLYRSEDYGKNFKDITDLINNTFIRTEF-GMAIGPENSGKVVLTAEVSGGSRGGRIFRSSDFAKNFVQTDLP-FHPLT 141 (685)
T ss_dssp EEEEEEESSTTSSCEECGGGGTTCCBCGGG-CEEECSTTCCCEEEEECCCTTCSSCEEEEESSTTSSCEEEECS-SCBSS
T ss_pred CCeEEEEeCCCCCceECcCCCCCCccccee-EEEECCCCCCEEEEEEeccCCCCCceEEEECCCCceeEeccCC-CCCce
Confidence 45677765433355555322111 24 7899974 37888764 34555544445 4444322 1222
Q ss_pred cEEEccC--CcEEEE
Q 018705 136 DVIAASD--GTLYFT 148 (351)
Q Consensus 136 ~l~~d~d--G~ly~t 148 (351)
.|+++|. +.+|+.
T Consensus 142 ~l~~~P~~~~~l~a~ 156 (685)
T 3f6k_A 142 QMMYSPQNSDYLLAL 156 (685)
T ss_dssp CCEEETTEEEEEEEE
T ss_pred EEEEecCCCCEEEEE
Confidence 5777764 245544
No 356
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=23.69 E-value=3.2e+02 Score=22.82 Aligned_cols=115 Identities=10% Similarity=0.082 Sum_probs=62.3
Q ss_pred CCeEEE-EE----cCCEEEEEEcCCCeEEEEeecCC-ccccceEEcCCCCEEEEeCC-------CCeEEEcC-CC-eEEe
Q 018705 63 KGALYT-AT----RDGWVKYFILHNETLVNWKHIDS-QSLLGLTTTKDGGVILCDNE-------KGLLKVTE-EG-VEAI 127 (351)
Q Consensus 63 ~g~lyv-~~----~~g~I~~~d~~~g~~~~~~~~~~-~p~~gl~~d~~G~L~v~d~~-------~gl~~~~~-~g-~~~l 127 (351)
++.+|+ |. ....++++|+.+++++....... +-..+.+. -++.||+.... ..+.+++. +. .+.+
T Consensus 55 ~~~lyv~GG~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~~d~~~~~W~~~ 133 (306)
T 3ii7_A 55 DNVVYILGGSQLFPIKRMDCYNVVKDSWYSKLGPPTPRDSLAACA-AEGKIYTSGGSEVGNSALYLFECYDTRTESWHTK 133 (306)
T ss_dssp TTEEEEECCBSSSBCCEEEEEETTTTEEEEEECCSSCCBSCEEEE-ETTEEEEECCBBTTBSCCCCEEEEETTTTEEEEE
T ss_pred CCEEEEEeCCCCCCcceEEEEeCCCCeEEECCCCCccccceeEEE-ECCEEEEECCCCCCCcEeeeEEEEeCCCCceEeC
Confidence 566766 32 23579999998888876643321 21102222 36788886432 24777775 44 5544
Q ss_pred cCCC-CCcccEEEccCCcEEEEeCCCccCCcccccccccccCCceEEEEeCCCCeEEEee
Q 018705 128 VPDA-SFTNDVIAASDGTLYFTVASTKYTPTDFYKDMAEGKPYGQLRKYDPKLKETTVLH 186 (351)
Q Consensus 128 ~~~~-~~~n~l~~d~dG~ly~t~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~~~~~~~~ 186 (351)
.... .....-++.-+|.||+.-....... .+.....+++||+.+++.+.+.
T Consensus 134 ~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~--------~~~~~~~~~~yd~~~~~W~~~~ 185 (306)
T 3ii7_A 134 PSMLTQRCSHGMVEANGLIYVCGGSLGNNV--------SGRVLNSCEVYDPATETWTELC 185 (306)
T ss_dssp CCCSSCCBSCEEEEETTEEEEECCEESCTT--------TCEECCCEEEEETTTTEEEEEC
T ss_pred CCCcCCcceeEEEEECCEEEEECCCCCCCC--------cccccceEEEeCCCCCeEEECC
Confidence 3321 2222223334778888654210000 0001346999999998887764
No 357
>1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1
Probab=21.67 E-value=5e+02 Score=24.31 Aligned_cols=45 Identities=13% Similarity=0.345 Sum_probs=34.5
Q ss_pred cCCCceEEEeeCCCeEEEEEcCCEEEEEEcCCCeEEEEeecCCcc
Q 018705 51 VNHPEDVSVVVSKGALYTATRDGWVKYFILHNETLVNWKHIDSQS 95 (351)
Q Consensus 51 ~~~pe~i~~d~~~g~lyv~~~~g~I~~~d~~~g~~~~~~~~~~~p 95 (351)
..-|-++.++++-|.+|+-+.-|-|+.+|..+|...-.......+
T Consensus 258 ~DFPvamqvs~kygviyviTK~G~i~lyDleTgt~i~~nrIs~~~ 302 (494)
T 1bpo_A 258 NDFPVAMQISEKHDVVFLITKYGYIHLYDLETGTCIYMNRISGET 302 (494)
T ss_dssp TCCEEEEEEETTTTEEEEEETTSEEEEEETTTCCEEEEEECCSSC
T ss_pred cCceeEEEecccCCEEEEEecCceEEEEecccceeeeeecccCCc
Confidence 456889999988899999999999999999888653333333333
No 358
>4eqa_C PA1845 protein, putative uncharacterized protein; type VI secretion, T6S, antitoxin-toxin complex, unknown FUN; 1.60A {Pseudomonas aeruginosa} PDB: 4fgi_B
Probab=20.54 E-value=2.4e+02 Score=20.19 Aligned_cols=8 Identities=25% Similarity=0.244 Sum_probs=3.8
Q ss_pred CCCEEEEe
Q 018705 104 DGGVILCD 111 (351)
Q Consensus 104 ~G~L~v~d 111 (351)
.|.-|..|
T Consensus 111 sgqrwavd 118 (153)
T 4eqa_C 111 SGQRWAVD 118 (153)
T ss_dssp TTCEEEEE
T ss_pred cCceEeec
Confidence 34445444
No 359
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=20.30 E-value=6e+02 Score=24.70 Aligned_cols=109 Identities=9% Similarity=0.003 Sum_probs=60.6
Q ss_pred CCeEEEEE-c------CCEEEEEEcCCCeEEEEeecC-CccccceEEcCCCCEEEEeCCC---CeEEEcC-CC-eEEecC
Q 018705 63 KGALYTAT-R------DGWVKYFILHNETLVNWKHID-SQSLLGLTTTKDGGVILCDNEK---GLLKVTE-EG-VEAIVP 129 (351)
Q Consensus 63 ~g~lyv~~-~------~g~I~~~d~~~g~~~~~~~~~-~~p~~gl~~d~~G~L~v~d~~~---gl~~~~~-~g-~~~l~~ 129 (351)
++.+|+-. . -..++++|+.+.+++...... .+-..+.+.-.+|.|||..... .++.++. +. .+.+..
T Consensus 451 ~~~lyv~GG~~~~~~~~~dv~~yd~~t~~W~~~~~~p~~R~~h~~~~~~~~~iyv~GG~~~~~~v~~yd~~t~~W~~~~~ 530 (695)
T 2zwa_A 451 NNQLLLIGGRKAPHQGLSDNWIFDMKTREWSMIKSLSHTRFRHSACSLPDGNVLILGGVTEGPAMLLYNVTEEIFKDVTP 530 (695)
T ss_dssp TTEEEEECCBSSTTCBCCCCEEEETTTTEEEECCCCSBCCBSCEEEECTTSCEEEECCBCSSCSEEEEETTTTEEEECCC
T ss_pred CCEEEEEcCCCCCCCccccEEEEeCCCCcEEECCCCCCCcccceEEEEcCCEEEEECCCCCCCCEEEEECCCCceEEccC
Confidence 67777631 1 234889999888877653322 1111033332478899875332 5788885 55 555543
Q ss_pred C--C----CCcccEEEccC-CcEEEEeCCCccCCcccccccccccCCceEEEEeCCCCe
Q 018705 130 D--A----SFTNDVIAASD-GTLYFTVASTKYTPTDFYKDMAEGKPYGQLRKYDPKLKE 181 (351)
Q Consensus 130 ~--~----~~~n~l~~d~d-G~ly~t~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~~~~ 181 (351)
. . .....++++.+ |.||+-.....-+ ......+++||+.+++
T Consensus 531 ~g~~p~~r~~~~a~v~~~~~~~iyv~GG~~~~~----------~~~~~~v~~yd~~~~~ 579 (695)
T 2zwa_A 531 KDEFFQNSLVSAGLEFDPVSKQGIILGGGFMDQ----------TTVSDKAIIFKYDAEN 579 (695)
T ss_dssp SSGGGGSCCBSCEEEEETTTTEEEEECCBCTTS----------SCBCCEEEEEEECTTC
T ss_pred CCCCCCcccceeEEEEeCCCCEEEEECCcCCCC----------CeeeCcEEEEEccCCc
Confidence 1 1 22333555655 7899875421100 0113579999998877
Done!