BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 018706
(351 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P46519|LEA14_SOYBN Desiccation protectant protein Lea14 homolog OS=Glycine max PE=2
SV=1
Length = 152
Score = 82.8 bits (203), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 83/153 (54%), Gaps = 6/153 (3%)
Query: 63 FIEKVKDFIHDIGEKIEETIGFGKPTADVTAVHIPKINLERADIVIDVLIKNPNPIPIPL 122
++K K+++ E+ KP A VT V +++ + + + V + NP PIP+
Sbjct: 4 LLDKAKNYVA------EKVTNMPKPEASVTDVDFKRVSRDSVEYLAKVSVSNPYSTPIPI 57
Query: 123 IDINYLVESDGRKLVSGLIPDSGTIHAHGEETVKIPVTLIYDDIKNAYDDIKPGMIIPYK 182
+I Y ++S G+++ SG IPD G++ A + +PV + + + + DI I Y+
Sbjct: 58 CEIKYSLKSAGKEIASGTIPDPGSLKASDTTMLDVPVKVPHSILLSLAKDIGADWDIDYQ 117
Query: 183 IKVDLIVDVPVFGRLTLPLEKNGEIPIPYKPDI 215
+ + L++D+PV G T+PL + GEI +P D+
Sbjct: 118 LDLGLVIDLPVIGNFTIPLSQKGEIKLPTLSDM 150
>sp|P46518|LEA14_GOSHI Late embryogenesis abundant protein Lea14-A OS=Gossypium hirsutum
GN=LEA14-A PE=2 SV=1
Length = 151
Score = 82.0 bits (201), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 48/153 (31%), Positives = 81/153 (52%), Gaps = 6/153 (3%)
Query: 63 FIEKVKDFIHDIGEKIEETIGFGKPTADVTAVHIPKINLERADIVIDVLIKNPNPIPIPL 122
+EK KDF+ +++ KP A V+ V + ++ E + V + NP IP+
Sbjct: 4 LLEKAKDFV------VDKVANIKKPEASVSDVDLKHVSRECVEYGAKVSVSNPYSHSIPI 57
Query: 123 IDINYLVESDGRKLVSGLIPDSGTIHAHGEETVKIPVTLIYDDIKNAYDDIKPGMIIPYK 182
+I+Y S GR + SG IPD G++ A + +PV + Y+ + + DI I Y+
Sbjct: 58 CEISYNFRSAGRGIASGTIPDPGSLKASDTTMLDVPVKVPYNILVSLVKDIGADWDIDYE 117
Query: 183 IKVDLIVDVPVFGRLTLPLEKNGEIPIPYKPDI 215
+++ L +D+P+ G T+PL + GEI +P DI
Sbjct: 118 LELGLTIDLPIVGNFTIPLSQKGEIKLPTLSDI 150
>sp|O03983|LEA14_ARATH Probable desiccation-related protein LEA14 OS=Arabidopsis thaliana
GN=LEA14 PE=1 SV=1
Length = 151
Score = 77.4 bits (189), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 45/150 (30%), Positives = 76/150 (50%), Gaps = 6/150 (4%)
Query: 61 GGFIEKVKDFIHDIGEKIEETIGFGKPTADVTAVHIPKINLERADIVIDVLIKNPNPIPI 120
++K KDF+ D + KP VT V + +N + + + V + NP I
Sbjct: 2 ASLLDKAKDFVAD------KLTAIPKPEGSVTDVDLKDVNRDSVEYLAKVSVTNPYSHSI 55
Query: 121 PLIDINYLVESDGRKLVSGLIPDSGTIHAHGEETVKIPVTLIYDDIKNAYDDIKPGMIIP 180
P+ +I++ S GR++ G IPD G++ A + IPV + Y + N D+ I
Sbjct: 56 PICEISFTFHSAGREIGKGKIPDPGSLKAKDMTALDIPVVVPYSILFNLARDVGVDWDID 115
Query: 181 YKIKVDLIVDVPVFGRLTLPLEKNGEIPIP 210
Y++++ L +D+PV G T+P+ GEI +P
Sbjct: 116 YELQIGLTIDLPVVGEFTIPISSKGEIKLP 145
>sp|O82355|LEA2R_ARATH Desiccation-related protein At2g46140 OS=Arabidopsis thaliana
GN=At2g46140 PE=1 SV=1
Length = 166
Score = 70.5 bits (171), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/179 (29%), Positives = 83/179 (46%), Gaps = 20/179 (11%)
Query: 33 MASSDKPEVVERDVKEKGHKEDDK-EEGKGGFIEKVKDFIHDIGEKIEETIGFGKPTADV 91
MAS+D E+ V+EK ++ KG F EK+ + P A V
Sbjct: 1 MASAD-----EKVVEEKASVISSLLDKAKGFFAEKLANI--------------PTPEATV 41
Query: 92 TAVHIPKINLERADIVIDVLIKNPNPIPIPLIDINYLVESDGRKLVSGLIPDSGTIHAHG 151
V + + D V +KNP IP+ I+Y+++S R + SG IPD G++ G
Sbjct: 42 DDVDFKGVTRDGVDYHAKVSVKNPYSQSIPICQISYILKSATRTIASGTIPDPGSLVGSG 101
Query: 152 EETVKIPVTLIYDDIKNAYDDIKPGMIIPYKIKVDLIVDVPVFGRLTLPLEKNGEIPIP 210
+ +PV + Y + D+ I Y++ + L D+PV G +T+P+ GEI +P
Sbjct: 102 TTVLDVPVKVAYSIAVSLMKDMCTDWDIDYQLDIGLTFDIPVVGDITIPVSTQGEIKLP 160
>sp|P22241|DRPD_CRAPL Desiccation-related protein PCC27-45 OS=Craterostigma plantagineum
PE=2 SV=1
Length = 151
Score = 69.3 bits (168), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 49/157 (31%), Positives = 80/157 (50%), Gaps = 14/157 (8%)
Query: 63 FIEKVKDFIHDIGEKIEETIGFGKPTADVTAVHIPKINLERADIVIDVLIKNPNPIPIPL 122
+ K K+F+ + +E KP A V V + + + + ++NP IP+
Sbjct: 4 LMNKAKNFVAEKVANVE------KPKASVEDVDLKDVGRHGITYLTRICVENPYSASIPV 57
Query: 123 IDINYLVESDGRKLVSGLIPDSGTIHAHG----EETVKIPVTLIYDDIKNAYDDIKPGMI 178
+I Y ++S GR +VSG IPD G++ + E +K+P + + IK DI M
Sbjct: 58 GEIKYTLKSAGRVIVSGNIPDPGSLKGNDKTMLEPAIKVPHSALVSLIK----DIGADMD 113
Query: 179 IPYKIKVDLIVDVPVFGRLTLPLEKNGEIPIPYKPDI 215
I Y +++ L+VD+PV G T+PL GE+ +P DI
Sbjct: 114 IDYVLELGLVVDLPVIGNFTIPLSHKGEMKLPGLSDI 150
>sp|P29431|YIDC_BUCAP Membrane protein insertase YidC OS=Buchnera aphidicola subsp.
Schizaphis graminum (strain Sg) GN=yidC PE=3 SV=3
Length = 536
Score = 38.1 bits (87), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 36/154 (23%), Positives = 69/154 (44%), Gaps = 28/154 (18%)
Query: 150 HGEETVKIPVTLIYDDIKNAYDDIKPGMIIPYKIKVDLIVDVP----------VFGRL-- 197
H E+ +++P+T I KN IK ++ P K V++ D+ +FG+L
Sbjct: 134 HNEKELRVPITFI---AKNGITYIKNFILKPGKYNVEVEYDINNLSNKKLELNIFGQLKQ 190
Query: 198 TLPLEKNGEIPIPYKPDIDLEKI----------KFERFSFEETVAILHLKLENKNDFDLA 247
T+ L KN +I Y + L+ K+E++ F+ HL + + +
Sbjct: 191 TVKLPKNRDI---YSGNFALQTFRGAAYSSSDAKYEKYKFDNIANHEHLHIITHHGWIAM 247
Query: 248 LNSLDYEVWLSDASIGAAELTKSAKIDKNGISYI 281
L W+ D +I ++ + ++ +D +GI+ I
Sbjct: 248 LQQYFVVAWVPDTNISSSNIIYTSYLDNDGIAII 281
>sp|P93400|PLDA1_TOBAC Phospholipase D alpha 1 OS=Nicotiana tabacum GN=PLD1 PE=2 SV=2
Length = 808
Score = 35.0 bits (79), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 34/62 (54%), Gaps = 12/62 (19%)
Query: 56 KEEGKGGFIEKVKDFIHDIGEKIEETIGFGKPTADVTAVHIPKINLERADIVIDVLIKN- 114
++EG G F K+K E +EETIGFGK T + A ++LE+A + IKN
Sbjct: 21 QKEGGGHFFSKIK-------EHVEETIGFGKGTPAIYAT----VDLEKARVGRTRKIKNE 69
Query: 115 PN 116
PN
Sbjct: 70 PN 71
>sp|Q5XJY5|COPD_MOUSE Coatomer subunit delta OS=Mus musculus GN=Arcn1 PE=2 SV=2
Length = 511
Score = 33.9 bits (76), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 36/74 (48%), Gaps = 1/74 (1%)
Query: 36 SDKPEVVERDVKEKGHKEDDKEEGKGGFIEKVKDFIHDIGEKIEETIGFGKPTADVTAVH 95
+DKP+V + G + K KG ++ D + GE I + GK T++ T VH
Sbjct: 207 TDKPKVAPAPARPSGPSKALKLGAKGKEVDNFVDKLKSEGETIMSS-NMGKRTSEATKVH 265
Query: 96 IPKINLERADIVID 109
P IN+E + I+
Sbjct: 266 APPINMESVHMKIE 279
>sp|Q8NRC3|ODO12_CORGL 2-oxoglutarate dehydrogenase E1/E2 component OS=Corynebacterium
glutamicum (strain ATCC 13032 / DSM 20300 / JCM 1318 /
LMG 3730 / NCIMB 10025) GN=odhA PE=1 SV=2
Length = 1221
Score = 33.9 bits (76), Expect = 1.8, Method: Composition-based stats.
Identities = 22/80 (27%), Positives = 40/80 (50%), Gaps = 13/80 (16%)
Query: 157 IPVTLIYDDIKNAYD--DIKPGMIIPYKIKVDLIVDVPVFGRLTLPLEKNGEIPIPYKPD 214
+ + + D+ N+YD D KP +I+P I + L +D+P +K+G +
Sbjct: 168 VKAVMAHPDMNNSYDVIDGKPTLIVPEHINLGLAIDLP---------QKDGSRALVVAAI 218
Query: 215 IDLEKIKFERF--SFEETVA 232
+ EK+ F F ++E+ VA
Sbjct: 219 KETEKMNFSEFLAAYEDIVA 238
>sp|P53619|COPD_BOVIN Coatomer subunit delta OS=Bos taurus GN=ARCN1 PE=1 SV=1
Length = 511
Score = 33.5 bits (75), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 36/74 (48%), Gaps = 1/74 (1%)
Query: 36 SDKPEVVERDVKEKGHKEDDKEEGKGGFIEKVKDFIHDIGEKIEETIGFGKPTADVTAVH 95
+DKP+V + G + K KG ++ D + GE I + GK T++ T VH
Sbjct: 207 TDKPKVAPAPARPSGPSKALKLGAKGKEVDNFVDKLKSEGENIISS-NMGKRTSEATKVH 265
Query: 96 IPKINLERADIVID 109
P IN+E + I+
Sbjct: 266 APPINMESVHMKIE 279
>sp|Q5HS05|METE_STAEQ 5-methyltetrahydropteroyltriglutamate--homocysteine
methyltransferase OS=Staphylococcus epidermidis (strain
ATCC 35984 / RP62A) GN=metE PE=3 SV=1
Length = 748
Score = 33.5 bits (75), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 44/99 (44%), Gaps = 14/99 (14%)
Query: 103 RADIVIDVLIKNPNPIPIPLIDINYLVESDGRKLVSGLIPDSGTIHAHGEETVKIPVTLI 162
+ DI +DVL+ + N +VE G KL L+ G + ++G VK PV I
Sbjct: 461 QEDIGLDVLVHGE-------FERNDMVEFFGEKLQGFLVTKFGWVQSYGSRAVKPPV--I 511
Query: 163 YDDIKNAYDDIKPGMIIPYKIKVDLIVDVPVFGRLTLPL 201
Y D+K + + + + D PV G LT P+
Sbjct: 512 YGDVK-----WTAPLTVKETVYAQSLTDKPVKGMLTGPV 545
>sp|Q8CMP5|METE_STAES 5-methyltetrahydropteroyltriglutamate--homocysteine
methyltransferase OS=Staphylococcus epidermidis (strain
ATCC 12228) GN=metE PE=3 SV=1
Length = 748
Score = 33.1 bits (74), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 44/99 (44%), Gaps = 14/99 (14%)
Query: 103 RADIVIDVLIKNPNPIPIPLIDINYLVESDGRKLVSGLIPDSGTIHAHGEETVKIPVTLI 162
+ DI +DVL+ + N +VE G KL L+ G + ++G VK PV I
Sbjct: 461 QEDIGLDVLVHGE-------FERNDMVEFFGEKLQGFLVTKFGWVQSYGSRAVKPPV--I 511
Query: 163 YDDIKNAYDDIKPGMIIPYKIKVDLIVDVPVFGRLTLPL 201
Y D+K + + + + D PV G LT P+
Sbjct: 512 YGDVK-----WTAPLTVKETVYAQSLTDKPVKGMLTGPV 545
>sp|Q4L330|METE_STAHJ 5-methyltetrahydropteroyltriglutamate--homocysteine
methyltransferase OS=Staphylococcus haemolyticus (strain
JCSC1435) GN=metE PE=3 SV=1
Length = 749
Score = 33.1 bits (74), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 44/99 (44%), Gaps = 14/99 (14%)
Query: 103 RADIVIDVLIKNPNPIPIPLIDINYLVESDGRKLVSGLIPDSGTIHAHGEETVKIPVTLI 162
+ DI +DVL+ + N +VE G KL L+ G + ++G VK PV I
Sbjct: 461 QEDIGLDVLVHGE-------FERNDMVEFFGEKLQGFLVTKFGWVQSYGSRAVKPPV--I 511
Query: 163 YDDIKNAYDDIKPGMIIPYKIKVDLIVDVPVFGRLTLPL 201
Y D+K + + + + D PV G LT P+
Sbjct: 512 YGDVK-----WTEPLTVKETVYAQSLTDKPVKGMLTGPV 545
>sp|P48444|COPD_HUMAN Coatomer subunit delta OS=Homo sapiens GN=ARCN1 PE=1 SV=1
Length = 511
Score = 32.7 bits (73), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 36/74 (48%), Gaps = 1/74 (1%)
Query: 36 SDKPEVVERDVKEKGHKEDDKEEGKGGFIEKVKDFIHDIGEKIEETIGFGKPTADVTAVH 95
+DKP+V + G + K KG ++ D + GE I + GK T++ T +H
Sbjct: 207 TDKPKVAPAPARPSGPSKALKLGAKGKEVDNFVDKLKSEGETIMSS-SMGKRTSEATKMH 265
Query: 96 IPKINLERADIVID 109
P IN+E + I+
Sbjct: 266 APPINMESVHMKIE 279
>sp|Q58538|Y1138_METJA Uncharacterized protein MJ1138 OS=Methanocaldococcus jannaschii
(strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC
100440) GN=MJ1138 PE=4 SV=1
Length = 174
Score = 32.7 bits (73), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 39/135 (28%), Positives = 61/135 (45%), Gaps = 12/135 (8%)
Query: 81 TIGFG----KPTADVTAVHIPKINLERADIVIDVLIKNPNPIPIPL----IDINYLVESD 132
+GF +P +V I K++ + I I VL+ NPNPI I + DI LV
Sbjct: 17 AVGFSGCLEQPKIEVVGQKIQKVDADNTKIEIQVLVDNPNPIGISIDKISFDIYALV--G 74
Query: 133 GRKLVSGLIPDSGTIHAHGEETVKIPVTLIYDDIKNAYDDIKPGMIIPYKIKVDLIVDVP 192
G K+ G S G T +PVT+ + K IP +IK D+ V++
Sbjct: 75 GDKIYLGHGEQSNIKITSGNTTFTLPVTISNKKLVEVALKEKSTK-IPIEIKGDIAVNLF 133
Query: 193 VFGRLTLPLEKNGEI 207
+ ++ +P++ EI
Sbjct: 134 I-TKVNIPIDIQQEI 147
>sp|Q66H80|COPD_RAT Coatomer subunit delta OS=Rattus norvegicus GN=Arcn1 PE=2 SV=1
Length = 511
Score = 32.3 bits (72), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 35/74 (47%), Gaps = 1/74 (1%)
Query: 36 SDKPEVVERDVKEKGHKEDDKEEGKGGFIEKVKDFIHDIGEKIEETIGFGKPTADVTAVH 95
+DKP+V + G + K KG ++ D + GE I + GK T++ VH
Sbjct: 207 TDKPKVAPAPARPSGPSKALKLGAKGKEVDNFVDKLKSEGETIMSS-NMGKRTSEAAKVH 265
Query: 96 IPKINLERADIVID 109
P IN+E + I+
Sbjct: 266 APPINMESVHMKIE 279
>sp|A8YZI1|METE_STAAT 5-methyltetrahydropteroyltriglutamate--homocysteine
methyltransferase OS=Staphylococcus aureus (strain
USA300 / TCH1516) GN=metE PE=3 SV=1
Length = 742
Score = 32.0 bits (71), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 44/99 (44%), Gaps = 14/99 (14%)
Query: 103 RADIVIDVLIKNPNPIPIPLIDINYLVESDGRKLVSGLIPDSGTIHAHGEETVKIPVTLI 162
+ DI +DVL+ + N +VE G KL L+ G + ++G VK P+ I
Sbjct: 461 QEDIGLDVLVHGE-------FERNDMVEFFGEKLQGFLVTKFGWVQSYGSRAVKPPI--I 511
Query: 163 YDDIKNAYDDIKPGMIIPYKIKVDLIVDVPVFGRLTLPL 201
Y D+K + + + + D PV G LT P+
Sbjct: 512 YGDVK-----WTAPLTVDETVYAQSLTDKPVKGMLTGPV 545
>sp|A6QE38|METE_STAAE 5-methyltetrahydropteroyltriglutamate--homocysteine
methyltransferase OS=Staphylococcus aureus (strain
Newman) GN=metE PE=3 SV=1
Length = 742
Score = 32.0 bits (71), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 44/99 (44%), Gaps = 14/99 (14%)
Query: 103 RADIVIDVLIKNPNPIPIPLIDINYLVESDGRKLVSGLIPDSGTIHAHGEETVKIPVTLI 162
+ DI +DVL+ + N +VE G KL L+ G + ++G VK P+ I
Sbjct: 461 QEDIGLDVLVHGE-------FERNDMVEFFGEKLQGFLVTKFGWVQSYGSRAVKPPI--I 511
Query: 163 YDDIKNAYDDIKPGMIIPYKIKVDLIVDVPVFGRLTLPL 201
Y D+K + + + + D PV G LT P+
Sbjct: 512 YGDVK-----WTAPLTVDETVYAQSLTDKPVKGMLTGPV 545
>sp|Q5HIT8|METE_STAAC 5-methyltetrahydropteroyltriglutamate--homocysteine
methyltransferase OS=Staphylococcus aureus (strain COL)
GN=metE PE=3 SV=1
Length = 742
Score = 32.0 bits (71), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 44/99 (44%), Gaps = 14/99 (14%)
Query: 103 RADIVIDVLIKNPNPIPIPLIDINYLVESDGRKLVSGLIPDSGTIHAHGEETVKIPVTLI 162
+ DI +DVL+ + N +VE G KL L+ G + ++G VK P+ I
Sbjct: 461 QEDIGLDVLVHGE-------FERNDMVEFFGEKLQGFLVTKFGWVQSYGSRAVKPPI--I 511
Query: 163 YDDIKNAYDDIKPGMIIPYKIKVDLIVDVPVFGRLTLPL 201
Y D+K + + + + D PV G LT P+
Sbjct: 512 YGDVK-----WTAPLTVDETVYAQSLTDKPVKGMLTGPV 545
>sp|Q2G122|METE_STAA8 5-methyltetrahydropteroyltriglutamate--homocysteine
methyltransferase OS=Staphylococcus aureus (strain NCTC
8325) GN=metE PE=3 SV=1
Length = 742
Score = 32.0 bits (71), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 44/99 (44%), Gaps = 14/99 (14%)
Query: 103 RADIVIDVLIKNPNPIPIPLIDINYLVESDGRKLVSGLIPDSGTIHAHGEETVKIPVTLI 162
+ DI +DVL+ + N +VE G KL L+ G + ++G VK P+ I
Sbjct: 461 QEDIGLDVLVHGE-------FERNDMVEFFGEKLQGFLVTKFGWVQSYGSRAVKPPI--I 511
Query: 163 YDDIKNAYDDIKPGMIIPYKIKVDLIVDVPVFGRLTLPL 201
Y D+K + + + + D PV G LT P+
Sbjct: 512 YGDVK-----WTAPLTVDETVYAQSLTDKPVKGMLTGPV 545
>sp|Q2FJQ7|METE_STAA3 5-methyltetrahydropteroyltriglutamate--homocysteine
methyltransferase OS=Staphylococcus aureus (strain
USA300) GN=metE PE=3 SV=1
Length = 742
Score = 32.0 bits (71), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 44/99 (44%), Gaps = 14/99 (14%)
Query: 103 RADIVIDVLIKNPNPIPIPLIDINYLVESDGRKLVSGLIPDSGTIHAHGEETVKIPVTLI 162
+ DI +DVL+ + N +VE G KL L+ G + ++G VK P+ I
Sbjct: 461 QEDIGLDVLVHGE-------FERNDMVEFFGEKLQGFLVTKFGWVQSYGSRAVKPPI--I 511
Query: 163 YDDIKNAYDDIKPGMIIPYKIKVDLIVDVPVFGRLTLPL 201
Y D+K + + + + D PV G LT P+
Sbjct: 512 YGDVK-----WTAPLTVDETVYAQSLTDKPVKGMLTGPV 545
>sp|P22940|TSAG_ORITS 56 kDa type-specific antigen OS=Orientia tsutsugamushi PE=1 SV=1
Length = 524
Score = 32.0 bits (71), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 20/70 (28%), Positives = 33/70 (47%), Gaps = 5/70 (7%)
Query: 106 IVIDVLIKNPNPIPIPLIDINYLVESDGRKLVSGLIPDSGTIHAHGEETVKIPVTLIYDD 165
+++++ PN P P +++ L R LV G+ T +H + PV ++ D
Sbjct: 205 VLLNITQGPPNVQPRPRQNLDILDHGQWRHLVVGV-----TALSHANKPSVTPVKVLSDK 259
Query: 166 IKNAYDDIKP 175
I Y DIKP
Sbjct: 260 ITKIYSDIKP 269
>sp|Q8NY94|METE_STAAW 5-methyltetrahydropteroyltriglutamate--homocysteine
methyltransferase OS=Staphylococcus aureus (strain MW2)
GN=metE PE=3 SV=1
Length = 742
Score = 32.0 bits (71), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 44/99 (44%), Gaps = 14/99 (14%)
Query: 103 RADIVIDVLIKNPNPIPIPLIDINYLVESDGRKLVSGLIPDSGTIHAHGEETVKIPVTLI 162
+ DI +DVL+ + N +VE G KL L+ G + ++G VK P+ I
Sbjct: 461 QEDIGLDVLVHGE-------FERNDMVEFFGEKLQGFLVTKFGWVQSYGSRAVKPPI--I 511
Query: 163 YDDIKNAYDDIKPGMIIPYKIKVDLIVDVPVFGRLTLPL 201
Y D+K + + + + D PV G LT P+
Sbjct: 512 YGDVK-----WTAPLTVDETVYAQSLTDKPVKGMLTGPV 545
>sp|Q6GCB6|METE_STAAS 5-methyltetrahydropteroyltriglutamate--homocysteine
methyltransferase OS=Staphylococcus aureus (strain
MSSA476) GN=metE PE=3 SV=1
Length = 742
Score = 32.0 bits (71), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 44/99 (44%), Gaps = 14/99 (14%)
Query: 103 RADIVIDVLIKNPNPIPIPLIDINYLVESDGRKLVSGLIPDSGTIHAHGEETVKIPVTLI 162
+ DI +DVL+ + N +VE G KL L+ G + ++G VK P+ I
Sbjct: 461 QEDIGLDVLVHGE-------FERNDMVEFFGEKLQGFLVTKFGWVQSYGSRAVKPPI--I 511
Query: 163 YDDIKNAYDDIKPGMIIPYKIKVDLIVDVPVFGRLTLPL 201
Y D+K + + + + D PV G LT P+
Sbjct: 512 YGDVK-----WTAPLTVDETVYAQSLTDKPVKGMLTGPV 545
>sp|Q6GJW2|METE_STAAR 5-methyltetrahydropteroyltriglutamate--homocysteine
methyltransferase OS=Staphylococcus aureus (strain
MRSA252) GN=metE PE=3 SV=1
Length = 742
Score = 32.0 bits (71), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 44/99 (44%), Gaps = 14/99 (14%)
Query: 103 RADIVIDVLIKNPNPIPIPLIDINYLVESDGRKLVSGLIPDSGTIHAHGEETVKIPVTLI 162
+ DI +DVL+ + N +VE G KL L+ G + ++G VK P+ I
Sbjct: 461 QEDIGLDVLVHGE-------FERNDMVEFFGEKLQGFLVTKFGWVQSYGSRAVKPPI--I 511
Query: 163 YDDIKNAYDDIKPGMIIPYKIKVDLIVDVPVFGRLTLPL 201
Y D+K + + + + D PV G LT P+
Sbjct: 512 YGDVK-----WTAPLTVDETVYAQSLTDKPVKGMLTGPV 545
>sp|Q2YVH7|METE_STAAB 5-methyltetrahydropteroyltriglutamate--homocysteine
methyltransferase OS=Staphylococcus aureus (strain
bovine RF122 / ET3-1) GN=metE PE=3 SV=1
Length = 742
Score = 32.0 bits (71), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 44/99 (44%), Gaps = 14/99 (14%)
Query: 103 RADIVIDVLIKNPNPIPIPLIDINYLVESDGRKLVSGLIPDSGTIHAHGEETVKIPVTLI 162
+ DI +DVL+ + N +VE G KL L+ G + ++G VK P+ I
Sbjct: 461 QEDIGLDVLVHGE-------FERNDMVEFFGEKLQGFLVTKFGWVQSYGSRAVKPPI--I 511
Query: 163 YDDIKNAYDDIKPGMIIPYKIKVDLIVDVPVFGRLTLPL 201
Y D+K + + + + D PV G LT P+
Sbjct: 512 YGDVK-----WTAPLTVDETVYAQSLTDKPVKGMLTGPV 545
>sp|P65343|METE_STAAN 5-methyltetrahydropteroyltriglutamate--homocysteine
methyltransferase OS=Staphylococcus aureus (strain N315)
GN=metE PE=3 SV=1
Length = 742
Score = 32.0 bits (71), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 44/99 (44%), Gaps = 14/99 (14%)
Query: 103 RADIVIDVLIKNPNPIPIPLIDINYLVESDGRKLVSGLIPDSGTIHAHGEETVKIPVTLI 162
+ DI +DVL+ + N +VE G KL L+ G + ++G VK P+ I
Sbjct: 461 QEDIGLDVLVHGE-------FERNDMVEFFGEKLQGFLVTKFGWVQSYGSRAVKPPI--I 511
Query: 163 YDDIKNAYDDIKPGMIIPYKIKVDLIVDVPVFGRLTLPL 201
Y D+K + + + + D PV G LT P+
Sbjct: 512 YGDVK-----WTAPLTVDETVYAQSLTDKPVKGMLTGPV 545
>sp|P65342|METE_STAAM 5-methyltetrahydropteroyltriglutamate--homocysteine
methyltransferase OS=Staphylococcus aureus (strain Mu50
/ ATCC 700699) GN=metE PE=1 SV=1
Length = 742
Score = 32.0 bits (71), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 44/99 (44%), Gaps = 14/99 (14%)
Query: 103 RADIVIDVLIKNPNPIPIPLIDINYLVESDGRKLVSGLIPDSGTIHAHGEETVKIPVTLI 162
+ DI +DVL+ + N +VE G KL L+ G + ++G VK P+ I
Sbjct: 461 QEDIGLDVLVHGE-------FERNDMVEFFGEKLQGFLVTKFGWVQSYGSRAVKPPI--I 511
Query: 163 YDDIKNAYDDIKPGMIIPYKIKVDLIVDVPVFGRLTLPL 201
Y D+K + + + + D PV G LT P+
Sbjct: 512 YGDVK-----WTAPLTVDETVYAQSLTDKPVKGMLTGPV 545
>sp|A7WY46|METE_STAA1 5-methyltetrahydropteroyltriglutamate--homocysteine
methyltransferase OS=Staphylococcus aureus (strain Mu3 /
ATCC 700698) GN=metE PE=3 SV=1
Length = 742
Score = 32.0 bits (71), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 44/99 (44%), Gaps = 14/99 (14%)
Query: 103 RADIVIDVLIKNPNPIPIPLIDINYLVESDGRKLVSGLIPDSGTIHAHGEETVKIPVTLI 162
+ DI +DVL+ + N +VE G KL L+ G + ++G VK P+ I
Sbjct: 461 QEDIGLDVLVHGE-------FERNDMVEFFGEKLQGFLVTKFGWVQSYGSRAVKPPI--I 511
Query: 163 YDDIKNAYDDIKPGMIIPYKIKVDLIVDVPVFGRLTLPL 201
Y D+K + + + + D PV G LT P+
Sbjct: 512 YGDVK-----WTAPLTVDETVYAQSLTDKPVKGMLTGPV 545
>sp|A5IPT7|METE_STAA9 5-methyltetrahydropteroyltriglutamate--homocysteine
methyltransferase OS=Staphylococcus aureus (strain JH9)
GN=metE PE=3 SV=1
Length = 742
Score = 32.0 bits (71), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 44/99 (44%), Gaps = 14/99 (14%)
Query: 103 RADIVIDVLIKNPNPIPIPLIDINYLVESDGRKLVSGLIPDSGTIHAHGEETVKIPVTLI 162
+ DI +DVL+ + N +VE G KL L+ G + ++G VK P+ I
Sbjct: 461 QEDIGLDVLVHGE-------FERNDMVEFFGEKLQGFLVTKFGWVQSYGSRAVKPPI--I 511
Query: 163 YDDIKNAYDDIKPGMIIPYKIKVDLIVDVPVFGRLTLPL 201
Y D+K + + + + D PV G LT P+
Sbjct: 512 YGDVK-----WTAPLTVDETVYAQSLTDKPVKGMLTGPV 545
>sp|A6TYK8|METE_STAA2 5-methyltetrahydropteroyltriglutamate--homocysteine
methyltransferase OS=Staphylococcus aureus (strain JH1)
GN=metE PE=3 SV=1
Length = 742
Score = 32.0 bits (71), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 44/99 (44%), Gaps = 14/99 (14%)
Query: 103 RADIVIDVLIKNPNPIPIPLIDINYLVESDGRKLVSGLIPDSGTIHAHGEETVKIPVTLI 162
+ DI +DVL+ + N +VE G KL L+ G + ++G VK P+ I
Sbjct: 461 QEDIGLDVLVHGE-------FERNDMVEFFGEKLQGFLVTKFGWVQSYGSRAVKPPI--I 511
Query: 163 YDDIKNAYDDIKPGMIIPYKIKVDLIVDVPVFGRLTLPL 201
Y D+K + + + + D PV G LT P+
Sbjct: 512 YGDVK-----WTAPLTVDETVYAQSLTDKPVKGMLTGPV 545
>sp|Q5THK1|PR14L_HUMAN Protein PRR14L OS=Homo sapiens GN=PRR14L PE=1 SV=1
Length = 2151
Score = 32.0 bits (71), Expect = 8.0, Method: Composition-based stats.
Identities = 19/67 (28%), Positives = 36/67 (53%), Gaps = 14/67 (20%)
Query: 35 SSDK--PEVVERDVKEKGHKEDDKEEGKGGFIEKVKDFIHDIGEKIEETI----GFGKPT 88
SSD+ P V+ D+K KG + ++ + G+ G++ +GE+ EE + G G P
Sbjct: 1318 SSDRHLPLTVKTDIKVKGEETEEHQRGRLGYLT--------VGEQSEELVTRETGDGDPV 1369
Query: 89 ADVTAVH 95
++++ H
Sbjct: 1370 SNISQTH 1376
>sp|Q5RA77|COPD_PONAB Coatomer subunit delta OS=Pongo abelii GN=ARCN1 PE=2 SV=1
Length = 511
Score = 31.6 bits (70), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 36/74 (48%), Gaps = 1/74 (1%)
Query: 36 SDKPEVVERDVKEKGHKEDDKEEGKGGFIEKVKDFIHDIGEKIEETIGFGKPTADVTAVH 95
+DKP+V + G + K KG ++ D + GE I + GK T++ + +H
Sbjct: 207 TDKPKVAPAPARPSGPSKALKLGAKGKEVDNFVDKLKSEGETIMSS-SMGKRTSEASKMH 265
Query: 96 IPKINLERADIVID 109
P IN+E + I+
Sbjct: 266 APPINMESVHMKIE 279
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.316 0.140 0.406
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 149,263,494
Number of Sequences: 539616
Number of extensions: 7300358
Number of successful extensions: 20648
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 42
Number of HSP's that attempted gapping in prelim test: 20591
Number of HSP's gapped (non-prelim): 85
length of query: 351
length of database: 191,569,459
effective HSP length: 118
effective length of query: 233
effective length of database: 127,894,771
effective search space: 29799481643
effective search space used: 29799481643
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 62 (28.5 bits)