Query 018706
Match_columns 351
No_of_seqs 213 out of 428
Neff 6.3
Searched_HMMs 29240
Date Mon Mar 25 04:48:51 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/018706.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/018706hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1yyc_A LEA protein, putative l 100.0 1.5E-37 5.1E-42 276.6 14.6 153 57-215 21-173 (174)
2 1xo8_A AT1G01470; structural g 100.0 1.7E-37 5.7E-42 271.0 6.4 150 60-215 1-150 (151)
3 1yyc_A LEA protein, putative l 99.9 5.2E-28 1.8E-32 215.1 12.3 125 211-335 43-168 (174)
4 1xo8_A AT1G01470; structural g 99.9 3E-28 1E-32 212.4 9.7 125 211-335 20-145 (151)
5 3but_A Uncharacterized protein 99.9 1.1E-20 3.8E-25 161.8 16.4 113 89-202 3-116 (136)
6 3but_A Uncharacterized protein 99.8 6.1E-20 2.1E-24 157.2 14.2 113 215-327 3-116 (136)
7 2xzz_A Protein-glutamine gamma 89.6 0.96 3.3E-05 36.0 7.0 70 84-160 3-72 (102)
8 1ex0_A Coagulation factor XIII 82.1 32 0.0011 36.3 15.6 170 102-293 529-701 (731)
9 1g0d_A Protein-glutamine gamma 81.4 25 0.00086 36.9 14.4 170 102-293 484-657 (695)
10 3idu_A Uncharacterized protein 80.0 14 0.00047 30.3 9.8 70 84-160 14-83 (127)
11 3idu_A Uncharacterized protein 79.3 18 0.0006 29.7 10.2 84 210-314 14-97 (127)
12 1vjj_A Protein-glutamine gluta 75.7 35 0.0012 35.8 13.5 165 102-286 494-661 (692)
13 2l0d_A Cell surface protein; s 73.1 28 0.00095 28.0 9.6 67 86-158 2-68 (114)
14 2q3z_A Transglutaminase 2; tra 70.8 65 0.0022 33.8 14.1 169 102-292 485-659 (687)
15 3qbt_B Inositol polyphosphate 69.8 11 0.00039 31.1 6.8 80 85-170 23-108 (140)
16 2qsv_A Uncharacterized protein 69.6 58 0.002 28.5 14.5 170 90-291 6-187 (220)
17 2l0d_A Cell surface protein; s 60.7 63 0.0022 25.8 10.3 85 212-315 2-86 (114)
18 1yq2_A Beta-galactosidase; gly 57.8 12 0.0004 41.2 5.8 49 235-284 625-678 (1024)
19 3cmg_A Putative beta-galactosi 56.8 67 0.0023 33.1 11.2 93 86-187 148-249 (667)
20 2xzz_A Protein-glutamine gamma 54.4 34 0.0012 26.8 6.6 56 227-286 17-72 (102)
21 1ex0_A Coagulation factor XIII 46.6 52 0.0018 34.8 8.2 69 85-160 628-696 (731)
22 3cmg_A Putative beta-galactosi 45.3 1.5E+02 0.0051 30.4 11.6 97 225-330 170-274 (667)
23 1g0d_A Protein-glutamine gamma 43.4 35 0.0012 35.8 6.4 69 85-160 583-652 (695)
24 3fn9_A Putative beta-galactosi 42.8 1E+02 0.0036 32.0 10.0 94 86-187 160-263 (692)
25 3isy_A Bsupi, intracellular pr 40.0 1.5E+02 0.005 24.0 8.6 71 231-314 19-102 (120)
26 1yew_A Particulate methane mon 36.9 1.2E+02 0.0043 29.2 8.6 89 197-287 228-336 (382)
27 1jz7_A Lactase, beta-galactosi 33.8 48 0.0016 36.3 5.8 48 235-284 635-683 (1023)
28 3qis_A Inositol polyphosphate 33.5 2.6E+02 0.0089 26.4 10.5 80 85-170 26-111 (366)
29 3nqn_A Uncharacterized protein 31.5 2.2E+02 0.0075 24.1 8.3 25 180-204 45-69 (158)
30 1yq2_A Beta-galactosidase; gly 30.1 57 0.0019 35.7 5.7 49 109-158 625-678 (1024)
31 3qbt_B Inositol polyphosphate 29.4 2.3E+02 0.0077 23.0 8.1 73 212-289 24-102 (140)
32 3bga_A Beta-galactosidase; NYS 29.4 58 0.002 35.6 5.6 48 235-285 631-681 (1010)
33 3isy_A Bsupi, intracellular pr 29.4 53 0.0018 26.7 4.0 54 105-158 19-85 (120)
34 4ay0_A Chaperone protein CAF1M 24.2 77 0.0026 28.1 4.5 151 108-287 30-191 (218)
35 2r39_A FIXG-related protein; s 23.8 1.7E+02 0.0057 22.9 6.1 55 230-292 31-88 (118)
36 1vjj_A Protein-glutamine gluta 23.2 65 0.0022 33.8 4.3 67 85-158 592-659 (692)
37 2e6j_A Hydin protein; PAPD, st 22.7 2E+02 0.007 21.5 6.3 68 87-160 8-79 (112)
38 3mnm_A ADP-ribosylation factor 22.7 2.9E+02 0.01 22.0 7.9 90 105-211 32-122 (123)
39 3bga_A Beta-galactosidase; NYS 20.9 1E+02 0.0035 33.7 5.5 49 109-159 631-681 (1010)
40 2g30_A AP-2 complex subunit be 20.5 1.4E+02 0.0049 27.1 5.7 63 225-289 50-113 (258)
41 4djm_A DRAB; chaperone, PILI; 20.3 61 0.0021 29.2 3.1 149 108-284 40-211 (239)
No 1
>1yyc_A LEA protein, putative late embryogenesis abundant protein; structural genomics, protein structure initiative, CESG; NMR {Arabidopsis thaliana}
Probab=100.00 E-value=1.5e-37 Score=276.58 Aligned_cols=153 Identities=29% Similarity=0.561 Sum_probs=148.1
Q ss_pred cccccchhHHHHHHHHhhhhhhhcccCCCCCeEEEEeEEecccccceeEEEEEEEEECCCCCCeeeeceEEEEEECCEEE
Q 018706 57 EEGKGGFIEKVKDFIHDIGEKIEETIGFGKPTADVTAVHIPKINLERADIVIDVLIKNPNPIPIPLIDINYLVESDGRKL 136 (351)
Q Consensus 57 ~~~~~~~~~~~~~~~~~~~~k~~~~~~f~~P~Vsv~~v~i~~vs~~~~~l~v~l~V~NPNp~~L~l~~i~Y~l~~nG~~v 136 (351)
...|+|||||||+|+ ||||++ +++|+|++++++|.++++.+++|.++++|+|||++|||+.+++|+|++||+++
T Consensus 21 ~~~~~~~~~~~k~f~---~~ki~~---~~~PeV~v~~v~~~~~~l~~~~~~l~LrV~NPN~~pLpi~gi~Y~L~vnG~~l 94 (174)
T 1yyc_A 21 ASVISSLLDKAKGFF---AEKLAN---IPTPEATVDDVDFKGVTRDGVDYHAKVSVKNPYSQSIPICQISYILKSATRTI 94 (174)
T ss_dssp HHHHHHHHHHHHHHH---HHTTTT---SCCCEEEEEEEEEEEECSSSEEEEEEEEEEECSSSCCBCCSEEEEEEESSSCE
T ss_pred hhhhhHHHHHhhhhH---HHhhcC---CCCCEEEEEEeEEeccccceEEEEEEEEEECCCCCCccccceEEEEEECCEEE
Confidence 467899999999999 999987 49999999999999999999999999999999999999999999999999999
Q ss_pred EEEEcCCceeecCCCeEEEEEEEEEehhhHHHHHhccCCCceeeEEEEEEEEEecccccceeeeeeeccccCCCCCCce
Q 018706 137 VSGLIPDSGTIHAHGEETVKIPVTLIYDDIKNAYDDIKPGMIIPYKIKVDLIVDVPVFGRLTLPLEKNGEIPIPYKPDI 215 (351)
Q Consensus 137 asG~~~~~~~Ipa~g~t~v~vpv~l~~~~L~~~l~~l~~~e~i~Y~l~g~l~vd~pilG~~tiP~e~sGei~lp~~P~v 215 (351)
++|+++++++|||+|++++++|++++|..+.+.++++.+++.++|+++|++.+++|++|.+++||+++|+++||++|++
T Consensus 95 asG~s~~~~tIpa~g~~~v~Vpv~v~~~~l~~~~~~l~~~~~i~Y~L~g~L~id~pv~G~~tip~s~~Gei~LP~l~d~ 173 (174)
T 1yyc_A 95 ASGTIPDPGSLVGSGTTVLDVPVKVAYSIAVSLMKDMCTDWDIDYQLDIGLTFDIPVVGDITIPVSTQGEIKLPSLRDF 173 (174)
T ss_dssp EEEEESCCCBCCSSEEEEEEEEEEESHHHHHHTCCCCCSSEEECEEEEEEEEEECTTSSEEEEEEEEECCEEECTTSSC
T ss_pred EEEecCCCceECCCCcEEEEEEEEEEHHHHHHHHHhcCCCCccceEEEEEEEeccCCcCCEEEeEeeceEEECCCCCCc
Confidence 9999999999999999999999999999999999999999999999999999999988999999999999999999975
No 2
>1xo8_A AT1G01470; structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG, unknown function; NMR {Arabidopsis thaliana} SCOP: b.1.25.1
Probab=100.00 E-value=1.7e-37 Score=270.98 Aligned_cols=150 Identities=31% Similarity=0.606 Sum_probs=145.7
Q ss_pred ccchhHHHHHHHHhhhhhhhcccCCCCCeEEEEeEEecccccceeEEEEEEEEECCCCCCeeeeceEEEEEECCEEEEEE
Q 018706 60 KGGFIEKVKDFIHDIGEKIEETIGFGKPTADVTAVHIPKINLERADIVIDVLIKNPNPIPIPLIDINYLVESDGRKLVSG 139 (351)
Q Consensus 60 ~~~~~~~~~~~~~~~~~k~~~~~~f~~P~Vsv~~v~i~~vs~~~~~l~v~l~V~NPNp~~L~l~~i~Y~l~~nG~~vasG 139 (351)
|+|||||||+|+ ||||++ +++|+|++++++|.++++.+++|.++++|+|||++||++.+++|+|++||+++++|
T Consensus 1 ~~~~~~~~~~f~---~~k~~~---~~~P~v~v~~v~~~~~~~~~~~~~~~l~V~NPN~~~lpi~gi~y~l~vng~~lasG 74 (151)
T 1xo8_A 1 MASLLDKAKDFV---ADKLTA---IPKPEGSVTDVDLKDVNRDSVEYLAKVSVTNPYSHSIPICEISFTFHSAGREIGKG 74 (151)
T ss_dssp CTTSCSCCCTTC---SSSCCC---CCSCCCBCSEEEECCCTTTEECEEEEEEEECSSSSCCCCEEEEEEEESSSSCEEEE
T ss_pred ChhHHHHHHHHH---HHhhcC---CCCCEEEEEEeEEeccCcceeEEEEEEEEECCCCCCcccccEEEEEEECCEEEEEE
Confidence 789999999999 999987 49999999999999999999999999999999999999999999999999999999
Q ss_pred EcCCceeecCCCeEEEEEEEEEehhhHHHHHhccCCCceeeEEEEEEEEEecccccceeeeeeeccccCCCCCCce
Q 018706 140 LIPDSGTIHAHGEETVKIPVTLIYDDIKNAYDDIKPGMIIPYKIKVDLIVDVPVFGRLTLPLEKNGEIPIPYKPDI 215 (351)
Q Consensus 140 ~~~~~~~Ipa~g~t~v~vpv~l~~~~L~~~l~~l~~~e~i~Y~l~g~l~vd~pilG~~tiP~e~sGei~lp~~P~v 215 (351)
+++++++|||+|++++++|++++|..+.+.++++.+++.++|+++|++.+++|++|.+++||+++|++++|++|++
T Consensus 75 ~~~~~~~ipa~g~~~v~vpv~v~~~~l~~~~~~l~~~~~i~Y~l~g~l~i~lp~~G~~tip~~~~Gei~lp~~~d~ 150 (151)
T 1xo8_A 75 KIPDPGSLKAKDMTALDIPVVVPYSILFNLARDVGVDWDIDYELQIGLTIDLPVVGEFTIPISSKGEIKLPTFKDF 150 (151)
T ss_dssp EEEECCCCSSSSEEEEEECCCEEHHHHHHHHHHHHHHSEEEEEEEEEEEECCTTTSSEEEEEEEEEEEECCSCSSC
T ss_pred ecCCCcEECCCCcEEEEEEEEEEHHHHHHHHHhcccCCcccEEEEEEEEEcccccCcEEEeEeeccEEECCCCCCC
Confidence 9999999999999999999999999999999999899999999999999999977999999999999999999975
No 3
>1yyc_A LEA protein, putative late embryogenesis abundant protein; structural genomics, protein structure initiative, CESG; NMR {Arabidopsis thaliana}
Probab=99.95 E-value=5.2e-28 Score=215.11 Aligned_cols=125 Identities=14% Similarity=0.287 Sum_probs=121.0
Q ss_pred CCCceeeeeeeEEeecccceEEEEEEEEECCCCcccccCCeEEEEEECCeEEEEEEeCCceEEcCCCeEEEEEEEEeccc
Q 018706 211 YKPDIDLEKIKFERFSFEETVAILHLKLENKNDFDLALNSLDYEVWLSDASIGAAELTKSAKIDKNGISYIDIPITFRPK 290 (351)
Q Consensus 211 ~~P~v~i~~v~~~~vs~~~t~~~l~l~V~NPN~fpL~i~~l~Y~l~lnG~~ia~G~~~~~~~I~~~g~t~i~Vpvtv~~~ 290 (351)
.+|+|++++++|.++++.++++.++|+|+|||+||||+++++|+|++||+.+++|+++++++|||+++++++||+++++.
T Consensus 43 ~~PeV~v~~v~~~~~~l~~~~~~l~LrV~NPN~~pLpi~gi~Y~L~vnG~~lasG~s~~~~tIpa~g~~~v~Vpv~v~~~ 122 (174)
T 1yyc_A 43 PTPEATVDDVDFKGVTRDGVDYHAKVSVKNPYSQSIPICQISYILKSATRTIASGTIPDPGSLVGSGTTVLDVPVKVAYS 122 (174)
T ss_dssp CCCEEEEEEEEEEEECSSSEEEEEEEEEEECSSSCCBCCSEEEEEEESSSCEEEEEESCCCBCCSSEEEEEEEEEEESHH
T ss_pred CCCEEEEEEeEEeccccceEEEEEEEEEECCCCCCccccceEEEEEECCEEEEEEecCCCceECCCCcEEEEEEEEEEHH
Confidence 89999999999999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred chHHHHHHhhcCCCeeEEEEEEEEEccC-ccceEeeeecccceeee
Q 018706 291 DFGSALWDMIRGKGTGYTMKGHIDVDTP-FGAMKLPISKEGGTTRL 335 (351)
Q Consensus 291 ~~~~~l~~l~~~~~i~Y~l~G~l~vd~p-fG~~~iP~s~~G~~~~~ 335 (351)
++.+.+.++.++|.++|+++|++.+++| ||.++|||+++|++++=
T Consensus 123 ~l~~~~~~l~~~~~i~Y~L~g~L~id~pv~G~~tip~s~~Gei~LP 168 (174)
T 1yyc_A 123 IAVSLMKDMCTDWDIDYQLDIGLTFDIPVVGDITIPVSTQGEIKLP 168 (174)
T ss_dssp HHHHTCCCCCSSEEECEEEEEEEEEECTTSSEEEEEEEEECCEEEC
T ss_pred HHHHHHHhcCCCCccceEEEEEEEeccCCcCCEEEeEeeceEEECC
Confidence 8888888888888999999999999999 89999999999999984
No 4
>1xo8_A AT1G01470; structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG, unknown function; NMR {Arabidopsis thaliana} SCOP: b.1.25.1
Probab=99.95 E-value=3e-28 Score=212.38 Aligned_cols=125 Identities=14% Similarity=0.287 Sum_probs=121.8
Q ss_pred CCCceeeeeeeEEeecccceEEEEEEEEECCCCcccccCCeEEEEEECCeEEEEEEeCCceEEcCCCeEEEEEEEEeccc
Q 018706 211 YKPDIDLEKIKFERFSFEETVAILHLKLENKNDFDLALNSLDYEVWLSDASIGAAELTKSAKIDKNGISYIDIPITFRPK 290 (351)
Q Consensus 211 ~~P~v~i~~v~~~~vs~~~t~~~l~l~V~NPN~fpL~i~~l~Y~l~lnG~~ia~G~~~~~~~I~~~g~t~i~Vpvtv~~~ 290 (351)
.+|+|++++++|.++++.++++.++|+|+|||+|||++++++|+|++||+.+++|+++++.+||++|+++++||+++++.
T Consensus 20 ~~P~v~v~~v~~~~~~~~~~~~~~~l~V~NPN~~~lpi~gi~y~l~vng~~lasG~~~~~~~ipa~g~~~v~vpv~v~~~ 99 (151)
T 1xo8_A 20 PKPEGSVTDVDLKDVNRDSVEYLAKVSVTNPYSHSIPICEISFTFHSAGREIGKGKIPDPGSLKAKDMTALDIPVVVPYS 99 (151)
T ss_dssp CSCCCBCSEEEECCCTTTEECEEEEEEEECSSSSCCCCEEEEEEEESSSSCEEEEEEEECCCCSSSSEEEEEECCCEEHH
T ss_pred CCCEEEEEEeEEeccCcceeEEEEEEEEECCCCCCcccccEEEEEEECCEEEEEEecCCCcEECCCCcEEEEEEEEEEHH
Confidence 89999999999999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred chHHHHHHhhcCCCeeEEEEEEEEEccC-ccceEeeeecccceeee
Q 018706 291 DFGSALWDMIRGKGTGYTMKGHIDVDTP-FGAMKLPISKEGGTTRL 335 (351)
Q Consensus 291 ~~~~~l~~l~~~~~i~Y~l~G~l~vd~p-fG~~~iP~s~~G~~~~~ 335 (351)
.+.+.+.++.++|.++|+++|++.+++| +|.++|||+++|++++=
T Consensus 100 ~l~~~~~~l~~~~~i~Y~l~g~l~i~lp~~G~~tip~~~~Gei~lp 145 (151)
T 1xo8_A 100 ILFNLARDVGVDWDIDYELQIGLTIDLPVVGEFTIPISSKGEIKLP 145 (151)
T ss_dssp HHHHHHHHHHHHSEEEEEEEEEEEECCTTTSSEEEEEEEEEEEECC
T ss_pred HHHHHHHhcccCCcccEEEEEEEEEcccccCcEEEeEeeccEEECC
Confidence 8888899998999999999999999999 89999999999999984
No 5
>3but_A Uncharacterized protein AF_0446; lipid binding protein, beta barrel, protein structure initia PSI-2; 1.91A {Archaeoglobus fulgidus dsm 4304}
Probab=99.86 E-value=1.1e-20 Score=161.76 Aligned_cols=113 Identities=15% Similarity=0.260 Sum_probs=105.4
Q ss_pred EEEEeEEecccccceeEEEEEEEEECCCCCCeeeeceEEEEEECCEEEEEEEcCCceeecCCCeEEEEEEEEEehhhHHH
Q 018706 89 ADVTAVHIPKINLERADIVIDVLIKNPNPIPIPLIDINYLVESDGRKLVSGLIPDSGTIHAHGEETVKIPVTLIYDDIKN 168 (351)
Q Consensus 89 Vsv~~v~i~~vs~~~~~l~v~l~V~NPNp~~L~l~~i~Y~l~~nG~~vasG~~~~~~~Ipa~g~t~v~vpv~l~~~~L~~ 168 (351)
|.-.+.+|+.++.+.++|.++++|+|||++||++.+++|+|++||+++++|.+.+.++||++|++++++++++++.++++
T Consensus 3 v~~i~~~WG~v~~~~t~~~~~l~V~NPN~~~l~i~gl~y~v~lng~~la~G~s~~~~~I~~~g~~~v~v~~~i~~~~l~~ 82 (136)
T 3but_A 3 LESVKAMWGVVTDSQTEIVALAKVRNEDVVPIVVSGYHYTIEMNGVKVADGYENSPVTVKPASATTLKFSLRLNNSFLRE 82 (136)
T ss_dssp EEEEEEEECCCCSSEEEEEEEEEEECCSSSCEEEEEEEEEEEETTEEEEEEEECCCEEECTTCEEEEEEEEEEEHHHHTT
T ss_pred ccceeeeeccEeCcEEEEEEEEEEeCCCCcceeeeceEEEEEECCEEEEeeeecCceEECCCCcEEEEEEEEEchHHhHH
Confidence 45567789999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HH-hccCCCceeeEEEEEEEEEecccccceeeeee
Q 018706 169 AY-DDIKPGMIIPYKIKVDLIVDVPVFGRLTLPLE 202 (351)
Q Consensus 169 ~l-~~l~~~e~i~Y~l~g~l~vd~pilG~~tiP~e 202 (351)
|| +|+++++...|+++.++.++++. +.+++|+.
T Consensus 83 ~~~~hi~nge~s~l~i~~~~~l~v~g-~~~~vp~~ 116 (136)
T 3but_A 83 WWVTHIANGEKTKIRVAIKPTIEIGG-RDVEVPVF 116 (136)
T ss_dssp HHHHHHHTTSEEEEEEEEEEEEECC--CCEECCCE
T ss_pred HHHHHhhcCCceEEEEEEEEEEEeCC-EEEEEccc
Confidence 88 99999999999999999999986 57787764
No 6
>3but_A Uncharacterized protein AF_0446; lipid binding protein, beta barrel, protein structure initia PSI-2; 1.91A {Archaeoglobus fulgidus dsm 4304}
Probab=99.83 E-value=6.1e-20 Score=157.21 Aligned_cols=113 Identities=8% Similarity=0.122 Sum_probs=106.0
Q ss_pred eeeeeeeEEeecccceEEEEEEEEECCCCcccccCCeEEEEEECCeEEEEEEeCCceEEcCCCeEEEEEEEEecccchHH
Q 018706 215 IDLEKIKFERFSFEETVAILHLKLENKNDFDLALNSLDYEVWLSDASIGAAELTKSAKIDKNGISYIDIPITFRPKDFGS 294 (351)
Q Consensus 215 v~i~~v~~~~vs~~~t~~~l~l~V~NPN~fpL~i~~l~Y~l~lnG~~ia~G~~~~~~~I~~~g~t~i~Vpvtv~~~~~~~ 294 (351)
|.-++.+|+.++.+.++|.++|+|+|||++||++++++|+|++||+.+|+|.+.+..+||+++++++++++++++..+.+
T Consensus 3 v~~i~~~WG~v~~~~t~~~~~l~V~NPN~~~l~i~gl~y~v~lng~~la~G~s~~~~~I~~~g~~~v~v~~~i~~~~l~~ 82 (136)
T 3but_A 3 LESVKAMWGVVTDSQTEIVALAKVRNEDVVPIVVSGYHYTIEMNGVKVADGYENSPVTVKPASATTLKFSLRLNNSFLRE 82 (136)
T ss_dssp EEEEEEEECCCCSSEEEEEEEEEEECCSSSCEEEEEEEEEEEETTEEEEEEEECCCEEECTTCEEEEEEEEEEEHHHHTT
T ss_pred ccceeeeeccEeCcEEEEEEEEEEeCCCCcceeeeceEEEEEECCEEEEeeeecCceEECCCCcEEEEEEEEEchHHhHH
Confidence 56678999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhhc-CCCeeEEEEEEEEEccCccceEeeee
Q 018706 295 ALWDMIR-GKGTGYTMKGHIDVDTPFGAMKLPIS 327 (351)
Q Consensus 295 ~l~~l~~-~~~i~Y~l~G~l~vd~pfG~~~iP~s 327 (351)
+|..+++ ++...|+++.++.++.+.+.+++|+.
T Consensus 83 ~~~~hi~nge~s~l~i~~~~~l~v~g~~~~vp~~ 116 (136)
T 3but_A 83 WWVTHIANGEKTKIRVAIKPTIEIGGRDVEVPVF 116 (136)
T ss_dssp HHHHHHHTTSEEEEEEEEEEEEECC-CCEECCCE
T ss_pred HHHHHhhcCCceEEEEEEEEEEEeCCEEEEEccc
Confidence 9977764 45899999999999999999999987
No 7
>2xzz_A Protein-glutamine gamma-glutamyltransferase K; 2.30A {Homo sapiens}
Probab=89.65 E-value=0.96 Score=36.02 Aligned_cols=70 Identities=17% Similarity=0.311 Sum_probs=45.3
Q ss_pred CCCCeEEEEeEEecccccceeEEEEEEEEECCCCCCeeeeceEEEEEECCEEEEEEEcCCceeecCCCeEEEEEEEE
Q 018706 84 FGKPTADVTAVHIPKINLERADIVIDVLIKNPNPIPIPLIDINYLVESDGRKLVSGLIPDSGTIHAHGEETVKIPVT 160 (351)
Q Consensus 84 f~~P~Vsv~~v~i~~vs~~~~~l~v~l~V~NPNp~~L~l~~i~Y~l~~nG~~vasG~~~~~~~Ipa~g~t~v~vpv~ 160 (351)
|..|.+++. +.+----...+.+.+.++||.+ .+|.+..+.++--|. ..+..-+...|+++++..+++.++
T Consensus 3 ~~~P~i~I~---v~g~~~v~~~l~v~vsf~NPL~--~~L~~c~~~vEG~GL--~~~~~~~~~~v~pg~~~~~~~~~~ 72 (102)
T 2xzz_A 3 YFQSMLSLT---LLGAAVVGQECEVQIVFKNPLP--VTLTNVVFRLEGSGL--QRPKILNVGDIGGNETVTLRQSFV 72 (102)
T ss_dssp ---CEEEEE---ESSCCCSSSCEEEEEEEECCSS--SCBCSEEEEEEETTT--EEEEEEEECCBCTTCEEEEEEEEC
T ss_pred ccCCcEEEE---ECCCcccCCeEEEEEEEECCCC--CcccCEEEEEECCCC--CcceEEEcCcCCCCCEEEEEEEEe
Confidence 567888654 4433445677899999999987 667788778887774 333333346688877777666543
No 8
>1ex0_A Coagulation factor XIII A chain; transglutaminase, blood coagulation, mutant, W279F, oxyanion, transferase; 2.00A {Homo sapiens} SCOP: b.1.18.9 b.1.5.1 b.1.5.1 d.3.1.4 PDB: 1evu_A 1fie_A 1f13_A 1ggt_A 1ggu_A 1ggy_A 1qrk_A
Probab=82.05 E-value=32 Score=36.29 Aligned_cols=170 Identities=11% Similarity=-0.014 Sum_probs=96.1
Q ss_pred ceeEEEEEEEEECCCCCCeeeec--eEEEEEECCEEEEEEE-cCCceeecCCCeEEEEEEEEEehhhHHHHHhccCCCce
Q 018706 102 ERADIVIDVLIKNPNPIPIPLID--INYLVESDGRKLVSGL-IPDSGTIHAHGEETVKIPVTLIYDDIKNAYDDIKPGMI 178 (351)
Q Consensus 102 ~~~~l~v~l~V~NPNp~~L~l~~--i~Y~l~~nG~~vasG~-~~~~~~Ipa~g~t~v~vpv~l~~~~L~~~l~~l~~~e~ 178 (351)
-+..|.+.+.+.|...-.-.+.- -.-.++-+|.....-. .....+++++.+.+ +++.+.|.+=.+.+ .....
T Consensus 529 iG~df~v~l~~~N~s~~~~~v~~~l~a~~v~YtG~~~~~~~~~~~~~~L~p~~~~~--i~~~i~y~~Y~~~L---~d~~~ 603 (731)
T 1ex0_A 529 LGKDFKLSITFRNNSHNRYTITAYLSANITFYTGVPKAEFKKETFDVTLEPLSFKK--EAVLIQAGEYMGQL---LEQAS 603 (731)
T ss_dssp TTCCEEEEEEEEECSSSCEEEEEEEEEEEECTTSCEEEEEEEEEEEEEECTTEEEE--EEEEECHHHHTTTC---CTTCE
T ss_pred CCCCEEEEEEEEECCCCCEEEEEEEEEEEEeeCCccccceeEeeEEEEECCCceEE--EEEEECHHHHhhhc---cCCCE
Confidence 45689999999999886644311 1223444776443322 22246787775555 67778877544333 33333
Q ss_pred eeEEEEEEEEEecccccceeeeeeeccccCCCCCCceeeeeeeEEeecccceEEEEEEEEECCCCcccccCCeEEEEEEC
Q 018706 179 IPYKIKVDLIVDVPVFGRLTLPLEKNGEIPIPYKPDIDLEKIKFERFSFEETVAILHLKLENKNDFDLALNSLDYEVWLS 258 (351)
Q Consensus 179 i~Y~l~g~l~vd~pilG~~tiP~e~sGei~lp~~P~v~i~~v~~~~vs~~~t~~~l~l~V~NPN~fpL~i~~l~Y~l~ln 258 (351)
+. +.+...+... ...+-.+ ..|.| .+|++. +++.+-..-+..+.+.++++||-+. ++.+-.+.|.-.
T Consensus 604 i~--~~a~~~v~et---~~~~~~~--~di~l-~~P~l~---I~v~g~~~v~~~l~v~vsf~NPL~~--~L~~c~~~vEG~ 670 (731)
T 1ex0_A 604 LH--FFVTARINET---RDVLAKQ--KSTVL-TIPEII---IKVRGTQVVGSDMTVTVQFTNPLKE--TLRNVWVHLDGP 670 (731)
T ss_dssp EE--EEEEEEETTT---CCEEEEE--EEEEC-BCCCCE---EEEEECCBTTSCEEEEEEEECCSSS--CEEEEEEEEEET
T ss_pred EE--EEEEEEECCC---CeEEEEE--EEEEE-eCCCEE---EEeCCCcccCCeEEEEEEEECCCCC--cccceEEEEECC
Confidence 33 3333333321 1112122 22333 567765 3444444557789999999988655 455655566655
Q ss_pred CeEEEEEEeCCceEEcCCCeEEEEEEEEecccchH
Q 018706 259 DASIGAAELTKSAKIDKNGISYIDIPITFRPKDFG 293 (351)
Q Consensus 259 G~~ia~G~~~~~~~I~~~g~t~i~Vpvtv~~~~~~ 293 (351)
| +-.+..-.-..|+|+++..+.+.++ |...+
T Consensus 671 G--L~~~~~~~~~~v~pg~~~~~~~~~~--P~~~G 701 (731)
T 1ex0_A 671 G--VTRPMKKMFREIRPNSTVQWEEVCR--PWVSG 701 (731)
T ss_dssp T--TEEEEEEEEEEECTTCEEEEEEEEC--CSSCE
T ss_pred C--CCceeeEecCccCCCCEEEEEEEEE--ecccc
Confidence 5 4444544567899998877766665 54433
No 9
>1g0d_A Protein-glutamine gamma-glutamyltransferase; tissue transglutaminase,acyltransferase; 2.50A {Pagrus major} SCOP: b.1.18.9 b.1.5.1 b.1.5.1 d.3.1.4
Probab=81.39 E-value=25 Score=36.89 Aligned_cols=170 Identities=15% Similarity=0.078 Sum_probs=93.0
Q ss_pred ceeEEEEEEEEECCCCCCeee--eceEEEEEECCEEEEE-EEcCCceeecCCCeEEEEEEEEEehhhHHHHHhccCCCce
Q 018706 102 ERADIVIDVLIKNPNPIPIPL--IDINYLVESDGRKLVS-GLIPDSGTIHAHGEETVKIPVTLIYDDIKNAYDDIKPGMI 178 (351)
Q Consensus 102 ~~~~l~v~l~V~NPNp~~L~l--~~i~Y~l~~nG~~vas-G~~~~~~~Ipa~g~t~v~vpv~l~~~~L~~~l~~l~~~e~ 178 (351)
-+..|.+.+.+.|...-.-.+ .--.-.++-+|..... +...-..+++++.+.+ +++.+.|.+=.+.+ .....
T Consensus 484 ~G~df~v~v~~~N~s~~~~~v~~~l~a~~v~YtG~~~~~~~~~~~~~~L~p~~~~~--v~~~i~y~~Y~~~L---~d~~~ 558 (695)
T 1g0d_A 484 FGTDFDVIVEVKNEGGRDAHAQLTMLAMAVTYNSLRRGECQRKTISVTVPAHKAHK--EVMRLHYDDYVRCV---SEHHL 558 (695)
T ss_dssp TTCCEEEEEEEEECSSSCEEEEEEEEEEEECTTCBCCCCCCEEEEEEEECTTEEEE--EEEEECHHHHTTTC---CTTCE
T ss_pred CCCCEEEEEEEEECCCCCEEEEEEEEEEEEeeCCcccCceeEeeEEEEECCCceEE--EEEEECHHHHhhhc---ccCCe
Confidence 567899999999988866433 1111233336653322 1122246777766554 67778877544333 33333
Q ss_pred eeEEEEEEEEEecccccceeeeeeeccccCCCCCCceeeeeeeEEeecccceEEEEEEEEECCCCcccccCCeEEEEEEC
Q 018706 179 IPYKIKVDLIVDVPVFGRLTLPLEKNGEIPIPYKPDIDLEKIKFERFSFEETVAILHLKLENKNDFDLALNSLDYEVWLS 258 (351)
Q Consensus 179 i~Y~l~g~l~vd~pilG~~tiP~e~sGei~lp~~P~v~i~~v~~~~vs~~~t~~~l~l~V~NPN~fpL~i~~l~Y~l~ln 258 (351)
+.. .+...+... ...+ -.+..|.| .+|++.|. +.+-..-+..+.+.+.++||-+ +++.+..+.|.-.
T Consensus 559 i~~--~a~~~v~et---~~~~--~~~~di~l-~~P~l~I~---v~g~~~v~~~l~a~vsf~NPL~--~~L~~c~~~vEG~ 625 (695)
T 1g0d_A 559 IRV--KALLDAPGE---NGPI--MTVANIPL-STPELLVQ---VPGKAVVWEPLTAYVSFTNPLP--VPLKGGVFTLEGA 625 (695)
T ss_dssp EEE--EEEEECCC------EE--EEEEEEEC-BCCCCEEE---CCSCEETTCCEEEEEEEECCSS--SCEESCEEEEEET
T ss_pred EEE--EEEEEECCC---CeEE--EEEEEEEE-cCCCEEEE---eCCCcccCCeEEEEEEEECCCC--CcccceEEEEECC
Confidence 333 333332211 1112 22233333 56776533 3333344678888999988755 5566777777777
Q ss_pred CeEEEEEEeCCc-eEEcCCCeEEEEEEEEecccchH
Q 018706 259 DASIGAAELTKS-AKIDKNGISYIDIPITFRPKDFG 293 (351)
Q Consensus 259 G~~ia~G~~~~~-~~I~~~g~t~i~Vpvtv~~~~~~ 293 (351)
|.. .+..-.- ..|+|+++..+.+.++ |...+
T Consensus 626 GL~--~~~~~~~~~~v~Pg~~~~~~~~~~--P~~~G 657 (695)
T 1g0d_A 626 GLL--SATQIHVNGAVAPSGKVSVKLSFS--PMRTG 657 (695)
T ss_dssp TTE--EEEEEECSSEECTTCEEEEEEEEC--CSSCE
T ss_pred CCC--cceEEecCCCcCCCCEEEEEEEEE--cCCcc
Confidence 743 3333333 5799998877666655 55443
No 10
>3idu_A Uncharacterized protein; all beta-protein, structural genomics, PSI-2, protein structure initiative; 1.70A {Pyrococcus furiosus} PDB: 2kl6_A
Probab=79.98 E-value=14 Score=30.32 Aligned_cols=70 Identities=17% Similarity=0.116 Sum_probs=52.0
Q ss_pred CCCCeEEEEeEEecccccceeEEEEEEEEECCCCCCeeeeceEEEEEECCEEEEEEEcCCceeecCCCeEEEEEEEE
Q 018706 84 FGKPTADVTAVHIPKINLERADIVIDVLIKNPNPIPIPLIDINYLVESDGRKLVSGLIPDSGTIHAHGEETVKIPVT 160 (351)
Q Consensus 84 f~~P~Vsv~~v~i~~vs~~~~~l~v~l~V~NPNp~~L~l~~i~Y~l~~nG~~vasG~~~~~~~Ipa~g~t~v~vpv~ 160 (351)
+..|.+.+ ++....-=..+..+.+.+.|+|=-..+. .+..-.+++||..+.+-. ..|+++.++++.+...
T Consensus 14 ~~~pDL~V-~is~P~~v~~G~~~ti~vtV~N~G~~~a--~~~~V~lyvng~~v~t~~----v~La~G~s~tv~f~~~ 83 (127)
T 3idu_A 14 FEFPDLTV-EIKGPDVVGVNKLAEYEVHVKNLGGIGV--PSTKVRVYINGTLYKNWT----VSLGPKEEKVLTFNWT 83 (127)
T ss_dssp CSSCCEEE-EEESCSEECTTCCEEEEEEEEECSSSCE--EEEEEEEEETTEEEEEEE----EEECTTCEEEEEEEEC
T ss_pred ccCCCeEE-EecCCCcccCCCEEEEEEEEEECCCCcc--CCcEEEEEECCEEEeeEE----eccCCCCeEEEEEEEE
Confidence 68899988 6664443345677888899999988665 456668889999876542 3699999999888753
No 11
>3idu_A Uncharacterized protein; all beta-protein, structural genomics, PSI-2, protein structure initiative; 1.70A {Pyrococcus furiosus} PDB: 2kl6_A
Probab=79.26 E-value=18 Score=29.68 Aligned_cols=84 Identities=13% Similarity=0.131 Sum_probs=58.7
Q ss_pred CCCCceeeeeeeEEeecccceEEEEEEEEECCCCcccccCCeEEEEEECCeEEEEEEeCCceEEcCCCeEEEEEEEEecc
Q 018706 210 PYKPDIDLEKIKFERFSFEETVAILHLKLENKNDFDLALNSLDYEVWLSDASIGAAELTKSAKIDKNGISYIDIPITFRP 289 (351)
Q Consensus 210 p~~P~v~i~~v~~~~vs~~~t~~~l~l~V~NPN~fpL~i~~l~Y~l~lnG~~ia~G~~~~~~~I~~~g~t~i~Vpvtv~~ 289 (351)
..+|++.+ ++..-.--..+..+.+.+.|.|-...+. .+..-.|++||..+++-. ..|+++.++++.+..+.
T Consensus 14 ~~~pDL~V-~is~P~~v~~G~~~ti~vtV~N~G~~~a--~~~~V~lyvng~~v~t~~----v~La~G~s~tv~f~~~~-- 84 (127)
T 3idu_A 14 FEFPDLTV-EIKGPDVVGVNKLAEYEVHVKNLGGIGV--PSTKVRVYINGTLYKNWT----VSLGPKEEKVLTFNWTP-- 84 (127)
T ss_dssp CSSCCEEE-EEESCSEECTTCCEEEEEEEEECSSSCE--EEEEEEEEETTEEEEEEE----EEECTTCEEEEEEEECC--
T ss_pred ccCCCeEE-EecCCCcccCCCEEEEEEEEEECCCCcc--CCcEEEEEECCEEEeeEE----eccCCCCeEEEEEEEEc--
Confidence 46788777 4432121234567889999999988775 577788889999887643 36999999988877652
Q ss_pred cchHHHHHHhhcCCCeeEEEEEEEE
Q 018706 290 KDFGSALWDMIRGKGTGYTMKGHID 314 (351)
Q Consensus 290 ~~~~~~l~~l~~~~~i~Y~l~G~l~ 314 (351)
. ..-.|.|++.++
T Consensus 85 ~------------~~G~~~v~AvVD 97 (127)
T 3idu_A 85 T------------QEGMYRINATVD 97 (127)
T ss_dssp S------------SCEEEEEEEEES
T ss_pred C------------CCcEEEEEEEEc
Confidence 1 134677777765
No 12
>1vjj_A Protein-glutamine glutamyltransferase E; transglutaminase 3, X-RAY crystallography, metalloenzyme, calcium ION; HET: GDP; 1.90A {Homo sapiens} SCOP: b.1.18.9 b.1.5.1 b.1.5.1 d.3.1.4 PDB: 1sgx_A* 1l9m_A 1l9n_A* 1nud_A 1nuf_A 1nug_A 1rle_A*
Probab=75.73 E-value=35 Score=35.78 Aligned_cols=165 Identities=13% Similarity=0.105 Sum_probs=91.2
Q ss_pred ceeEEEEEEEEECCCCCCeee--eceEEEEEECCEEEEEEE-cCCceeecCCCeEEEEEEEEEehhhHHHHHhccCCCce
Q 018706 102 ERADIVIDVLIKNPNPIPIPL--IDINYLVESDGRKLVSGL-IPDSGTIHAHGEETVKIPVTLIYDDIKNAYDDIKPGMI 178 (351)
Q Consensus 102 ~~~~l~v~l~V~NPNp~~L~l--~~i~Y~l~~nG~~vasG~-~~~~~~Ipa~g~t~v~vpv~l~~~~L~~~l~~l~~~e~ 178 (351)
-+..|.+.+.+.|+..-.-.+ .--.-.++-+|.....-. .....+++++.+.+ +++.+.|.+=.+.+ .....
T Consensus 494 ~G~df~v~l~~~N~s~~~~~v~~~l~a~~v~YtG~~~~~~~~~~~~v~L~p~~~~~--i~~~i~y~~Y~~~L---~d~~~ 568 (692)
T 1vjj_A 494 VGKEVNLVLLLKNLSRDTKTVTVNMTAWTIIYNGTLVHEVWKDSATMSLDPEEEAE--HPIKISYAQYERYL---KSDNM 568 (692)
T ss_dssp TTSCEEEEEEEEECSSSCEEEEEEEEEEEECTTCCEEEEEEEEEEEEEECTTCEEE--EEEEECHHHHHTTC---CTTCE
T ss_pred CCCCEEEEEEEEECCCCCEEEEEEEEEEEEeeCCccccceEEeeEEEEECCCceEE--EEEEECHHHHhhhc---ccCCe
Confidence 456899999999988865433 211223444787555422 22357888876665 66778887554444 23333
Q ss_pred eeEEEEEEEEEecccccceeeeeeeccccCCCCCCceeeeeeeEEeecccceEEEEEEEEECCCCcccccCCeEEEEEEC
Q 018706 179 IPYKIKVDLIVDVPVFGRLTLPLEKNGEIPIPYKPDIDLEKIKFERFSFEETVAILHLKLENKNDFDLALNSLDYEVWLS 258 (351)
Q Consensus 179 i~Y~l~g~l~vd~pilG~~tiP~e~sGei~lp~~P~v~i~~v~~~~vs~~~t~~~l~l~V~NPN~fpL~i~~l~Y~l~ln 258 (351)
+ ++.+...+... .. +-.+..|.| .+|++.| ++.+-..-+..+.+.++++||-+ .++.+-.+.|.-.
T Consensus 569 i--~~~a~~~v~et---~~---~~~~~di~l-~~P~l~I---~v~g~~~v~~~l~v~v~f~NPL~--~~L~~c~~~vEG~ 634 (692)
T 1vjj_A 569 I--RITAVCKVPDE---SE---VVVERDIIL-DNPTLTL---EVLNEARVRKPVNVQMLFSNPLD--EPVRDCVLMVEGS 634 (692)
T ss_dssp E--EEEEEEECTTS---CC---EEEEEEEEC-BCCCEEE---EECSCCBTTSCEEEEEEEECCSS--SCBCSEEEEEECT
T ss_pred E--EEEEEEEECCC---ce---EEEEEEEEE-cCCCEEE---EeCCCcccCCeEEEEEEEECCCC--CcccceEEEEECC
Confidence 3 33333332211 11 222233333 5677653 33333445678889999988765 4556666666555
Q ss_pred CeEEEEEEeCCceEEcCCCeEEEEEEEE
Q 018706 259 DASIGAAELTKSAKIDKNGISYIDIPIT 286 (351)
Q Consensus 259 G~~ia~G~~~~~~~I~~~g~t~i~Vpvt 286 (351)
|..-..-.. .-..|+|+++..+.+.++
T Consensus 635 GL~~~~~~~-~~~~v~pg~~~~~~~~~~ 661 (692)
T 1vjj_A 635 GLLLGNLKI-DVPTLGPKERSRVRFDIL 661 (692)
T ss_dssp TTSSSCEEE-EECCBCTTCEEEEEEEEC
T ss_pred CCCCCceEE-EcCccCCCCEEEEEEEEE
Confidence 532111122 235588888866666555
No 13
>2l0d_A Cell surface protein; structural genomics, northeast structural genomics consortiu PSI-2, protein structure initiative; NMR {Methanosarcina acetivorans}
Probab=73.06 E-value=28 Score=27.99 Aligned_cols=67 Identities=10% Similarity=0.109 Sum_probs=48.0
Q ss_pred CCeEEEEeEEecccccceeEEEEEEEEECCCCCCeeeeceEEEEEECCEEEEEEEcCCceeecCCCeEEEEEE
Q 018706 86 KPTADVTAVHIPKINLERADIVIDVLIKNPNPIPIPLIDINYLVESDGRKLVSGLIPDSGTIHAHGEETVKIP 158 (351)
Q Consensus 86 ~P~Vsv~~v~i~~vs~~~~~l~v~l~V~NPNp~~L~l~~i~Y~l~~nG~~vasG~~~~~~~Ipa~g~t~v~vp 158 (351)
.|.+.+.++..... .....+.+.+.|+|.-..+- ......+++||..+.+.... .|.++.++++.+.
T Consensus 2 ~PDL~vt~itP~~~-~~~~~~ti~atVkN~G~~~a--~~~~V~ly~~g~~v~t~~v~---~LaaG~s~tv~~~ 68 (114)
T 2l0d_A 2 IPDLVPVSLTPVTV-VPNTVNTMTATIENQGNKDS--TSFNVSLLVDGIVVDTQTVT---SLESENSTNVDFH 68 (114)
T ss_dssp CCCEEEEEEECSEE-CTTSEEEEEEEEEECSSSCB--CCEEEEEEETTEEEEEEEES---CBCBTCEEEEEEE
T ss_pred CCCcEEEeccCCCc-CCCCeEEEEEEEEECCCCCC--CCEEEEEEECCEEEcceecc---cccCCCEEEEEEE
Confidence 47788888854442 24567788889999988654 44555899999988777644 4777777787664
No 14
>2q3z_A Transglutaminase 2; transglutaminase 2, tissue transglutaminase, TG2, transferas; 2.00A {Homo sapiens} SCOP: b.1.18.9 b.1.5.1 b.1.5.1 d.3.1.4 PDB: 1kv3_A 3ly6_A*
Probab=70.80 E-value=65 Score=33.76 Aligned_cols=169 Identities=13% Similarity=0.138 Sum_probs=92.4
Q ss_pred ceeEEEEEEEEECCCCCCeeee--ceEEEEEECCEEEEEE-Ec-CCceeecCCCeEEEEEEEEEehhhHHHHHhccCCCc
Q 018706 102 ERADIVIDVLIKNPNPIPIPLI--DINYLVESDGRKLVSG-LI-PDSGTIHAHGEETVKIPVTLIYDDIKNAYDDIKPGM 177 (351)
Q Consensus 102 ~~~~l~v~l~V~NPNp~~L~l~--~i~Y~l~~nG~~vasG-~~-~~~~~Ipa~g~t~v~vpv~l~~~~L~~~l~~l~~~e 177 (351)
-+..|.+.+.+.|...-.-.+. --.-.++-+|.....- .. ....+++++.+.+ +++.+.|.+=.+ ++....
T Consensus 485 ~G~df~v~v~~~N~s~~~~~v~~~l~a~~v~YtG~~~~~~~~~~~~~~~l~p~~~~~--v~~~i~y~~Y~~---~L~d~~ 559 (687)
T 2q3z_A 485 MGSDFDVFAHITNNTAEEYVCRLLLCARTVSYNGILGPECGTKYLLNLTLEPFSEKS--VPLCILYEKYRD---CLTESN 559 (687)
T ss_dssp TTCCEEEEEEEEECSSSCEEEEEEEEEEEECTTCCEEEEEEEEEEEEEEECTTEEEE--EEEEECHHHHTT---TCCTTC
T ss_pred CCCCEEEEEEEEECCCCCEEEEEEEEEEEEeeCCcccceEeeeeeeEEEECCCceEE--EEEEECHHHHhh---hccCCC
Confidence 4578999999999988664331 1112333478765543 22 2246777776555 667788775443 333333
Q ss_pred eeeEEEEEEEEEecccccceeeeeeeccccCCCCCCceeeeeeeEEeecccceEEEEEEEEECCCCcccccCCeEEEEEE
Q 018706 178 IIPYKIKVDLIVDVPVFGRLTLPLEKNGEIPIPYKPDIDLEKIKFERFSFEETVAILHLKLENKNDFDLALNSLDYEVWL 257 (351)
Q Consensus 178 ~i~Y~l~g~l~vd~pilG~~tiP~e~sGei~lp~~P~v~i~~v~~~~vs~~~t~~~l~l~V~NPN~fpL~i~~l~Y~l~l 257 (351)
.+.. .+...+... ...+-.+ ..|.| .+|++.| ++.+-..-+..+.+.++++||-+. ++.+-.+.+.-
T Consensus 560 ~i~~--~a~~~v~et---~~~~~~~--~di~l-~~P~l~I---~v~g~~~v~~~~~v~v~f~NPL~~--~L~~c~~~vEG 626 (687)
T 2q3z_A 560 LIKV--RALLVEPVI---NSYLLAE--RDLYL-ENPEIKI---RILGEPKQKRKLVAEVSLQNPLPV--ALEGCTFTVEG 626 (687)
T ss_dssp EEEE--EEEEEETTT---TEEEEEE--EEEEC-BCCCCEE---EEESCCSSSSCEEEEEEEECCSSS--CBCSEEEEEEC
T ss_pred EEEE--EEEEEECCC---CeEEEEE--EEEEE-eCCCEEE---EeCCCcccCCeEEEEEEEECCCCC--cccceEEEEEC
Confidence 4433 333333221 1112222 23333 5677653 333334456788899999888655 55665555554
Q ss_pred CCeEEEEE--EeCCceEEcCCCeEEEEEEEEecccch
Q 018706 258 SDASIGAA--ELTKSAKIDKNGISYIDIPITFRPKDF 292 (351)
Q Consensus 258 nG~~ia~G--~~~~~~~I~~~g~t~i~Vpvtv~~~~~ 292 (351)
.| +..+ ...-...|+|+++..+.+.++ |...
T Consensus 627 ~G--L~~~~~~~~~~~~v~pg~~~~~~~~~~--P~~~ 659 (687)
T 2q3z_A 627 AG--LTEEQKTVEIPDPVEAGEEVKVRMDLV--PLHM 659 (687)
T ss_dssp TT--TCSSCEEEEECSCBCTTCEEEEEEEEC--CCSS
T ss_pred CC--CCCCceEEecCCCcCCCCEEEEEEEEE--eccc
Confidence 44 4343 222114688888876666655 5443
No 15
>3qbt_B Inositol polyphosphate 5-phosphatase OCRL-1; protein transport, vesicular trafficking, GTPase, LOWE syndr immunoglobulin fold, RAB8A, endocytosis; HET: GNP; 2.00A {Homo sapiens}
Probab=69.77 E-value=11 Score=31.14 Aligned_cols=80 Identities=11% Similarity=0.131 Sum_probs=52.8
Q ss_pred CCCeEEEE--eEEecccccceeEEEEEEEEECCCCCCeeeeceEEEEEECCE----EEEEEEcCCceeecCCCeEEEEEE
Q 018706 85 GKPTADVT--AVHIPKINLERADIVIDVLIKNPNPIPIPLIDINYLVESDGR----KLVSGLIPDSGTIHAHGEETVKIP 158 (351)
Q Consensus 85 ~~P~Vsv~--~v~i~~vs~~~~~l~v~l~V~NPNp~~L~l~~i~Y~l~~nG~----~vasG~~~~~~~Ipa~g~t~v~vp 158 (351)
..|.+++. .++|+.+.... .-.-.+.|.|...+|+...=+ ...++. .+.+- .+..++|+++++..+.|.
T Consensus 23 ~~P~i~v~~~~ldFG~v~~~~-~~~~~l~I~Ntg~vpa~F~f~---~~~~~~~~~~~wl~v-~P~~G~L~Pge~~~I~v~ 97 (140)
T 3qbt_B 23 FLPSLELSRREFVFENVKFRQ-LQKEKFQISNNGQVPCHFSFI---PKLNDSQYCKPWLRA-EPFEGYLEPNETVDISLD 97 (140)
T ss_dssp TSCCEEESCCEEEEEEECBTC-CEEEEEEEEECSSSCEEEEEE---CCTTCSSSSCTTEEE-ESCEEEECTTCEEEEEEE
T ss_pred cCCceEeeeeeEEeeeceeee-eeeeEEEEEcCCccceEEEEe---cCCCchhhhhHhhhc-CCcccccCCCCeeEEEEE
Confidence 45888775 67788887763 336689999999998874222 111111 12222 367889999999999999
Q ss_pred EEEehhhHHHHH
Q 018706 159 VTLIYDDIKNAY 170 (351)
Q Consensus 159 v~l~~~~L~~~l 170 (351)
+.++.. ...++
T Consensus 98 ~~v~~~-~~~~l 108 (140)
T 3qbt_B 98 VYVSKD-SVTIL 108 (140)
T ss_dssp ECBCHH-HHHHH
T ss_pred EEEccC-ccccc
Confidence 888763 33444
No 16
>2qsv_A Uncharacterized protein; MCSG, structural genomics, porphyromonas gingivalis W83, PSI protein structure initiative; 2.10A {Porphyromonas gingivalis}
Probab=69.63 E-value=58 Score=28.54 Aligned_cols=170 Identities=12% Similarity=0.098 Sum_probs=94.3
Q ss_pred EEEeEEecccccceeEEEEEEEEECCCCCCeeeeceEEEEEECCEEEEEEEcCCceeecCCCeEEEEEEEEEehhhHHHH
Q 018706 90 DVTAVHIPKINLERADIVIDVLIKNPNPIPIPLIDINYLVESDGRKLVSGLIPDSGTIHAHGEETVKIPVTLIYDDIKNA 169 (351)
Q Consensus 90 sv~~v~i~~vs~~~~~l~v~l~V~NPNp~~L~l~~i~Y~l~~nG~~vasG~~~~~~~Ipa~g~t~v~vpv~l~~~~L~~~ 169 (351)
+-..++|+.+... ..-...+.+.|.-..||.+..+. + -. ..+. ...+..|+++.+..+.+. .+...+..
T Consensus 6 ~~~~idFg~v~~g-~~~~~~~~i~N~g~~pl~i~~~~--~--p~--~~~~-~~~~~~I~PG~~g~I~vt--~~~~~~~~- 74 (220)
T 2qsv_A 6 SNARLLFPISMPE-DEGVVRLVVNNTDESDLQVAVVS--L--PS--FVSL-DDRAFRLQAREPRELNLS--LAVPRNMP- 74 (220)
T ss_dssp SCSEEECCSBCTT-CCCEEEEEEEECSSSCEEEEEEE--C--CT--TEEC-SCCEEEECSSSCEEEEEE--ECCCTTCC-
T ss_pred ecCeeEcccccCC-CcceEEEEEEeCCCCceEEEecc--C--CC--ceEe-eeCcceeCCCCceEEEEE--Ecchhccc-
Confidence 3346677777764 23344889999999999998762 1 11 1122 244678877776554444 43332211
Q ss_pred HhccCCCceeeEEEEEEEEEecc--c-ccceeeeeeeccccCCC--------CCCceee-eeeeEEeecccceEEEEEEE
Q 018706 170 YDDIKPGMIIPYKIKVDLIVDVP--V-FGRLTLPLEKNGEIPIP--------YKPDIDL-EKIKFERFSFEETVAILHLK 237 (351)
Q Consensus 170 l~~l~~~e~i~Y~l~g~l~vd~p--i-lG~~tiP~e~sGei~lp--------~~P~v~i-~~v~~~~vs~~~t~~~l~l~ 237 (351)
+.+ ++-...+.+..+ . .....|+++ |.+- | ..|.+.+ ..++|+.+. +......+.
T Consensus 75 ~G~--------~~~~i~v~~~~~~~~~~~~~~i~v~--g~v~-p~~~~~~~~~~~~i~~~~~~dfG~i~--g~~~~~~f~ 141 (220)
T 2qsv_A 75 PGM--------KDEPLVLEVTSPETGKKAVDSVMVS--LPLV-DNFPALTAAQTGVMELSTYLDMGQLD--GETTKAAIE 141 (220)
T ss_dssp SEE--------EEEEEEEEEECTTTCCEEEEEEEEE--EEEC-CCGGGCCGGGCCCEECCCEEEEEECT--TSCEEEEEE
T ss_pred CCc--------eeeEEEEEEEcCCCCcccccEEEEE--EEEc-ccchhhhhccCCEEEEEeEEeeeccC--CCeEEEEEE
Confidence 100 000111111100 0 001112221 2110 1 2455444 788999988 577888999
Q ss_pred EECCCCcccccCCeEEEEEECCeEEEEEEeCCceEEcCCCeEEEEEEEEecccc
Q 018706 238 LENKNDFDLALNSLDYEVWLSDASIGAAELTKSAKIDKNGISYIDIPITFRPKD 291 (351)
Q Consensus 238 V~NPN~fpL~i~~l~Y~l~lnG~~ia~G~~~~~~~I~~~g~t~i~Vpvtv~~~~ 291 (351)
++|-...||.|.++. ..+|-...+ .. ...|+|+.+..|.| ++++..
T Consensus 142 i~N~G~~pL~I~~v~---~scgct~~~--~~-~~~i~PGe~~~i~v--~~~~~~ 187 (220)
T 2qsv_A 142 IRNVGAGPLRLHSVT---TRNPALTAV--PD-RTEIKPGGSTLLRI--AVDPQV 187 (220)
T ss_dssp EEECSSSCEEEEEEE---ECSTTEEEE--ES-CSEECTTCEEEEEE--EECHHH
T ss_pred EEECCCCCEEEEEEE---eCCCCEeee--cC-CccCCCCCEEEEEE--EEecCC
Confidence 999999999998774 346665555 22 35699999776554 444543
No 17
>2l0d_A Cell surface protein; structural genomics, northeast structural genomics consortiu PSI-2, protein structure initiative; NMR {Methanosarcina acetivorans}
Probab=60.74 E-value=63 Score=25.85 Aligned_cols=85 Identities=18% Similarity=0.296 Sum_probs=58.4
Q ss_pred CCceeeeeeeEEeecccceEEEEEEEEECCCCcccccCCeEEEEEECCeEEEEEEeCCceEEcCCCeEEEEEEEEecccc
Q 018706 212 KPDIDLEKIKFERFSFEETVAILHLKLENKNDFDLALNSLDYEVWLSDASIGAAELTKSAKIDKNGISYIDIPITFRPKD 291 (351)
Q Consensus 212 ~P~v~i~~v~~~~vs~~~t~~~l~l~V~NPN~fpL~i~~l~Y~l~lnG~~ia~G~~~~~~~I~~~g~t~i~Vpvtv~~~~ 291 (351)
.|++.++.+.-.. -..+....+.+.|.|...-+ -..+.-.++++|..++..... .|.++.++++.+..+ +.
T Consensus 2 ~PDL~vt~itP~~-~~~~~~~ti~atVkN~G~~~--a~~~~V~ly~~g~~v~t~~v~---~LaaG~s~tv~~~w~--~~- 72 (114)
T 2l0d_A 2 IPDLVPVSLTPVT-VVPNTVNTMTATIENQGNKD--STSFNVSLLVDGIVVDTQTVT---SLESENSTNVDFHWT--LD- 72 (114)
T ss_dssp CCCEEEEEEECSE-ECTTSEEEEEEEEEECSSSC--BCCEEEEEEETTEEEEEEEES---CBCBTCEEEEEEEEE--CC-
T ss_pred CCCcEEEeccCCC-cCCCCeEEEEEEEEECCCCC--CCCEEEEEEECCEEEcceecc---cccCCCEEEEEEEEe--ec-
Confidence 4777777773222 23456778888999988765 366778899999998887643 378888888777443 21
Q ss_pred hHHHHHHhhcCCCeeEEEEEEEEE
Q 018706 292 FGSALWDMIRGKGTGYTMKGHIDV 315 (351)
Q Consensus 292 ~~~~l~~l~~~~~i~Y~l~G~l~v 315 (351)
+..-.|.|+..++-
T Consensus 73 ----------~~~G~ytl~a~VD~ 86 (114)
T 2l0d_A 73 ----------GTANSYTLTVNVDP 86 (114)
T ss_dssp ----------CSCSEEEEEEEECT
T ss_pred ----------CcCceEEEEEEECC
Confidence 11356888887764
No 18
>1yq2_A Beta-galactosidase; glycosyl hydrolase family 2, TIM barrel, hexamer; 1.90A {Arthrobacter SP} SCOP: b.1.4.1 b.1.4.1 b.18.1.5 b.30.5.1 c.1.8.3
Probab=57.77 E-value=12 Score=41.17 Aligned_cols=49 Identities=16% Similarity=0.179 Sum_probs=40.6
Q ss_pred EEEEECCCCcc-cccCCeEEEEEECCeEEEEEEeC----CceEEcCCCeEEEEEE
Q 018706 235 HLKLENKNDFD-LALNSLDYEVWLSDASIGAAELT----KSAKIDKNGISYIDIP 284 (351)
Q Consensus 235 ~l~V~NPN~fp-L~i~~l~Y~l~lnG~~ia~G~~~----~~~~I~~~g~t~i~Vp 284 (351)
.++|.|.+.|. +.=-.+.|+|..+|+.+++|.+. . ..|+|+++..+.+|
T Consensus 625 ~~~v~N~~~f~~l~~~~~~w~~~~~g~~~~~g~~~~~~~~-~~~~p~~~~~~~l~ 678 (1024)
T 1yq2_A 625 TLAVANLRHTADASDVVLRWRVEHDGAVAASGEVAAEGSD-GPLRAGESATIALP 678 (1024)
T ss_dssp EEEEEECCSSCCSTTEEEEEEEEETTEEEEEEEEECBCSS-SBCCTTCEEEEECC
T ss_pred eEEEEEccCCCCCccCeEEEEEEECCEEEEeeEEeccccC-ccCCCCCceEEEec
Confidence 48999999886 33336778999999999999993 3 57999999999988
No 19
>3cmg_A Putative beta-galactosidase; structural genomics, PSI-2, Pro structure initiative, NEW YORK SGX research center for STRU genomics, nysgxrc; 1.90A {Bacteroides fragilis}
Probab=56.83 E-value=67 Score=33.05 Aligned_cols=93 Identities=10% Similarity=0.152 Sum_probs=59.4
Q ss_pred CCeEEEEe-------EEec--ccccceeEEEEEEEEECCCCCCeeeeceEEEEEECCEEEEEEEcCCceeecCCCeEEEE
Q 018706 86 KPTADVTA-------VHIP--KINLERADIVIDVLIKNPNPIPIPLIDINYLVESDGRKLVSGLIPDSGTIHAHGEETVK 156 (351)
Q Consensus 86 ~P~Vsv~~-------v~i~--~vs~~~~~l~v~l~V~NPNp~~L~l~~i~Y~l~~nG~~vasG~~~~~~~Ipa~g~t~v~ 156 (351)
.|.+.|.+ +.+. .++...+++.+++.|.|+..-+- ..+..+|.-+|..+++.+.. .++.+.+...+.
T Consensus 148 ~~~~~I~~~~~~~~gv~v~~~~~~~~~a~v~v~~~~~~~~~~~~--~~v~~~l~d~g~~v~~~~~~--~~~~~~~~~~~~ 223 (667)
T 3cmg_A 148 TDETCISPLDYASPGVYLVQEVVSPQEAKVCAKVNLSNRAADGT--AELQVLVTDGTKVICKESRN--VSLKQGADILEQ 223 (667)
T ss_dssp ECSEEECSCSTTSCSEEEEEEEECSSEEEEEEEEEEEECSSSEE--EEEEEEEEETTEEEEEEEEE--EEECTTCEEEEE
T ss_pred ECCEEEeecccCCCceEEecccccCceEEEEEEEEEEcCCCCce--EEEEEEEECCCEEEEEEEEE--EEECCCCceEEE
Confidence 46666654 3333 45566788999999999764321 34555555588888876543 567777766777
Q ss_pred EEEEEehhhHHHHHhccCCCceeeEEEEEEE
Q 018706 157 IPVTLIYDDIKNAYDDIKPGMIIPYKIKVDL 187 (351)
Q Consensus 157 vpv~l~~~~L~~~l~~l~~~e~i~Y~l~g~l 187 (351)
+.+.+++- .+|+ ..+..--|++...+
T Consensus 224 ~~~~v~~p---~LWs--g~~~P~LY~l~~~l 249 (667)
T 3cmg_A 224 LPLLIQKP---RLWN--GCEDPFMYQVSISL 249 (667)
T ss_dssp EEEEEESC---CCBC--GGGCBCCEEEEEEE
T ss_pred EEEEcCCC---eeCC--CCcCceeEEEEEEE
Confidence 77777654 3453 14556677777776
No 20
>2xzz_A Protein-glutamine gamma-glutamyltransferase K; 2.30A {Homo sapiens}
Probab=54.37 E-value=34 Score=26.81 Aligned_cols=56 Identities=9% Similarity=0.088 Sum_probs=38.6
Q ss_pred ccceEEEEEEEEECCCCcccccCCeEEEEEECCeEEEEEEeCCceEEcCCCeEEEEEEEE
Q 018706 227 FEETVAILHLKLENKNDFDLALNSLDYEVWLSDASIGAAELTKSAKIDKNGISYIDIPIT 286 (351)
Q Consensus 227 ~~~t~~~l~l~V~NPN~fpL~i~~l~Y~l~lnG~~ia~G~~~~~~~I~~~g~t~i~Vpvt 286 (351)
.-+..+.+.++++||- +.++.+..+.+.-.|.. .+..-.-..|+++++..+.+..+
T Consensus 17 ~v~~~l~v~vsf~NPL--~~~L~~c~~~vEG~GL~--~~~~~~~~~v~pg~~~~~~~~~~ 72 (102)
T 2xzz_A 17 VVGQECEVQIVFKNPL--PVTLTNVVFRLEGSGLQ--RPKILNVGDIGGNETVTLRQSFV 72 (102)
T ss_dssp CSSSCEEEEEEEECCS--SSCBCSEEEEEEETTTE--EEEEEEECCBCTTCEEEEEEEEC
T ss_pred ccCCeEEEEEEEECCC--CCcccCEEEEEECCCCC--cceEEEcCcCCCCCEEEEEEEEe
Confidence 3456788889998875 55667777777777743 33444456799998877666555
No 21
>1ex0_A Coagulation factor XIII A chain; transglutaminase, blood coagulation, mutant, W279F, oxyanion, transferase; 2.00A {Homo sapiens} SCOP: b.1.18.9 b.1.5.1 b.1.5.1 d.3.1.4 PDB: 1evu_A 1fie_A 1f13_A 1ggt_A 1ggu_A 1ggy_A 1qrk_A
Probab=46.59 E-value=52 Score=34.75 Aligned_cols=69 Identities=12% Similarity=0.084 Sum_probs=44.5
Q ss_pred CCCeEEEEeEEecccccceeEEEEEEEEECCCCCCeeeeceEEEEEECCEEEEEEEcCCceeecCCCeEEEEEEEE
Q 018706 85 GKPTADVTAVHIPKINLERADIVIDVLIKNPNPIPIPLIDINYLVESDGRKLVSGLIPDSGTIHAHGEETVKIPVT 160 (351)
Q Consensus 85 ~~P~Vsv~~v~i~~vs~~~~~l~v~l~V~NPNp~~L~l~~i~Y~l~~nG~~vasG~~~~~~~Ipa~g~t~v~vpv~ 160 (351)
..|.++|.=.. --.-...+.+.+.++||.+ .+|.+..+.|+--|. ..+..-....|+++++.++.+.++
T Consensus 628 ~~P~l~I~v~g---~~~v~~~l~v~vsf~NPL~--~~L~~c~~~vEG~GL--~~~~~~~~~~v~pg~~~~~~~~~~ 696 (731)
T 1ex0_A 628 TIPEIIIKVRG---TQVVGSDMTVTVQFTNPLK--ETLRNVWVHLDGPGV--TRPMKKMFREIRPNSTVQWEEVCR 696 (731)
T ss_dssp BCCCCEEEEEE---CCBTTSCEEEEEEEECCSS--SCEEEEEEEEEETTT--EEEEEEEEEEECTTCEEEEEEEEC
T ss_pred eCCCEEEEeCC---CcccCCeEEEEEEEECCCC--CcccceEEEEECCCC--CceeeEecCccCCCCEEEEEEEEE
Confidence 56666544322 2234567889999999987 566777778877774 333444456788887777666543
No 22
>3cmg_A Putative beta-galactosidase; structural genomics, PSI-2, Pro structure initiative, NEW YORK SGX research center for STRU genomics, nysgxrc; 1.90A {Bacteroides fragilis}
Probab=45.31 E-value=1.5e+02 Score=30.40 Aligned_cols=97 Identities=14% Similarity=0.154 Sum_probs=58.3
Q ss_pred ecccceEEEEEEEEECCCCcccccCCeEEEEEECCeEEEEEEeCCceEEcCCCeEEEEEEEEecccchHHHHHHhhcCCC
Q 018706 225 FSFEETVAILHLKLENKNDFDLALNSLDYEVWLSDASIGAAELTKSAKIDKNGISYIDIPITFRPKDFGSALWDMIRGKG 304 (351)
Q Consensus 225 vs~~~t~~~l~l~V~NPN~fpL~i~~l~Y~l~lnG~~ia~G~~~~~~~I~~~g~t~i~Vpvtv~~~~~~~~l~~l~~~~~ 304 (351)
++.....+.+.+.+.|+..-+- ..+..+|.-+|..+++.+. ..++.+++...+.+.+.+..-. +|. .-+.+
T Consensus 170 ~~~~~a~v~v~~~~~~~~~~~~--~~v~~~l~d~g~~v~~~~~--~~~~~~~~~~~~~~~~~v~~p~----LWs-g~~~P 240 (667)
T 3cmg_A 170 VSPQEAKVCAKVNLSNRAADGT--AELQVLVTDGTKVICKESR--NVSLKQGADILEQLPLLIQKPR----LWN-GCEDP 240 (667)
T ss_dssp ECSSEEEEEEEEEEEECSSSEE--EEEEEEEEETTEEEEEEEE--EEEECTTCEEEEEEEEEEESCC----CBC-GGGCB
T ss_pred ccCceEEEEEEEEEEcCCCCce--EEEEEEEECCCEEEEEEEE--EEEECCCCceEEEEEEEcCCCe----eCC-CCcCc
Confidence 4445677888888988754321 2355566558888887653 4567777766666555654322 342 12456
Q ss_pred eeEEEEEEEE--------EccCccceEeeeeccc
Q 018706 305 TGYTMKGHID--------VDTPFGAMKLPISKEG 330 (351)
Q Consensus 305 i~Y~l~G~l~--------vd~pfG~~~iP~s~~G 330 (351)
--|++...+. +...||=.+|-+...+
T Consensus 241 ~LY~l~~~l~~~g~~~D~~~~~~G~R~i~~~~~~ 274 (667)
T 3cmg_A 241 FMYQVSISLHKDGKQIDSVTQPLGLRYYHTDPDK 274 (667)
T ss_dssp CCEEEEEEEEETTEEEEEEEEEECCCCEEEETTT
T ss_pred eeEEEEEEEEECCEEEEEEEEeeeeEEEEEeCCC
Confidence 7788887773 2334776666666433
No 23
>1g0d_A Protein-glutamine gamma-glutamyltransferase; tissue transglutaminase,acyltransferase; 2.50A {Pagrus major} SCOP: b.1.18.9 b.1.5.1 b.1.5.1 d.3.1.4
Probab=43.37 E-value=35 Score=35.79 Aligned_cols=69 Identities=23% Similarity=0.368 Sum_probs=44.7
Q ss_pred CCCeEEEEeEEecccccceeEEEEEEEEECCCCCCeeeeceEEEEEECCEEEEEEEcCCc-eeecCCCeEEEEEEEE
Q 018706 85 GKPTADVTAVHIPKINLERADIVIDVLIKNPNPIPIPLIDINYLVESDGRKLVSGLIPDS-GTIHAHGEETVKIPVT 160 (351)
Q Consensus 85 ~~P~Vsv~~v~i~~vs~~~~~l~v~l~V~NPNp~~L~l~~i~Y~l~~nG~~vasG~~~~~-~~Ipa~g~t~v~vpv~ 160 (351)
..|.+.| ++.+--.-...+.+.+.++||.| .+|.+..+.|+--|. ..+..-+. ..|+++++..+.+.++
T Consensus 583 ~~P~l~I---~v~g~~~v~~~l~a~vsf~NPL~--~~L~~c~~~vEG~GL--~~~~~~~~~~~v~Pg~~~~~~~~~~ 652 (695)
T 1g0d_A 583 STPELLV---QVPGKAVVWEPLTAYVSFTNPLP--VPLKGGVFTLEGAGL--LSATQIHVNGAVAPSGKVSVKLSFS 652 (695)
T ss_dssp BCCCCEE---ECCSCEETTCCEEEEEEEECCSS--SCEESCEEEEEETTT--EEEEEEECSSEECTTCEEEEEEEEC
T ss_pred cCCCEEE---EeCCCcccCCeEEEEEEEECCCC--CcccceEEEEECCCC--CcceEEecCCCcCCCCEEEEEEEEE
Confidence 5566543 33333344677899999999887 667788778887774 33333333 5788887777666543
No 24
>3fn9_A Putative beta-galactosidase; structural genomics, glycosidas hydrolase, PSI-2, protein structure initiative; 2.70A {Bacteroides fragilis}
Probab=42.76 E-value=1e+02 Score=32.01 Aligned_cols=94 Identities=19% Similarity=0.249 Sum_probs=59.2
Q ss_pred CCeEEEEe-------EEe--cccccceeEEEEEEEEECCCCCCeeeeceEEEEE-ECCEEEEEEEcCCceeecCCCeEEE
Q 018706 86 KPTADVTA-------VHI--PKINLERADIVIDVLIKNPNPIPIPLIDINYLVE-SDGRKLVSGLIPDSGTIHAHGEETV 155 (351)
Q Consensus 86 ~P~Vsv~~-------v~i--~~vs~~~~~l~v~l~V~NPNp~~L~l~~i~Y~l~-~nG~~vasG~~~~~~~Ipa~g~t~v 155 (351)
.|.+.|.+ +.+ ..++...+++.+.+.|.|+..-+-.+ .+.++|. -+|..+++... ..++.+.+..++
T Consensus 160 ~~~~~I~~~~~~~~gv~v~~~~~~~~~a~v~v~~~v~n~~~~~~~~-~v~~~l~d~~g~~v~~~~~--~~~~~~~~~~~~ 236 (692)
T 3fn9_A 160 TEQNNITVTDCASPGVYITQKDVSKKSADITVKVKLDNAGLQPAAV-TLENTIYTQEGQKVGTHSR--SFDLSPQGTQTY 236 (692)
T ss_dssp ECSEEECSCSTTCCSEEEEEESCSSSEEEEEEEEEEEECSSSCEEE-EEEEEEECTTSCEEEEEEE--EEEECSSSCEEE
T ss_pred ECCeEEecccccCCcEEEEeccccCCEEEEEEEEEEEeCCCCceeE-EEEEEEECCCCCEEEEEEe--EEEecCCCeEEE
Confidence 47777765 333 25666788999999999986543222 2334443 25777776643 356667777777
Q ss_pred EEEEEEehhhHHHHHhccCCCceeeEEEEEEE
Q 018706 156 KIPVTLIYDDIKNAYDDIKPGMIIPYKIKVDL 187 (351)
Q Consensus 156 ~vpv~l~~~~L~~~l~~l~~~e~i~Y~l~g~l 187 (351)
.+.+.+.+- .+|+ ..+..--|++..++
T Consensus 237 ~~~~~v~~p---~LWs--g~e~P~LY~l~v~l 263 (692)
T 3fn9_A 237 LSTFKLKNP---HLWQ--GRKDPYLYKVVCRL 263 (692)
T ss_dssp EEEEEEESC---CCCC--TTSCCCCEEEEEEE
T ss_pred EEEEEcCCc---eeCC--CCcCcccEEEEEEE
Confidence 788777764 3353 24566677777776
No 25
>3isy_A Bsupi, intracellular proteinase inhibitor; intracellular proteinase inhibitor bsupi, beta sandwich, GRE structural genomics; HET: PG4; 2.61A {Bacillus subtilis}
Probab=39.97 E-value=1.5e+02 Score=23.96 Aligned_cols=71 Identities=7% Similarity=0.098 Sum_probs=49.5
Q ss_pred EEEEEEEEECCCCcccccC---CeEEEEEE---CCeEEEE---EE----eCCceEEcCCCeEEEEEEEEecccchHHHHH
Q 018706 231 VAILHLKLENKNDFDLALN---SLDYEVWL---SDASIGA---AE----LTKSAKIDKNGISYIDIPITFRPKDFGSALW 297 (351)
Q Consensus 231 ~~~l~l~V~NPN~fpL~i~---~l~Y~l~l---nG~~ia~---G~----~~~~~~I~~~g~t~i~Vpvtv~~~~~~~~l~ 297 (351)
.+.+.|.|.|+.+.++.+. +..|++.+ +|..+=. +. .....+|+|+.+.+......
T Consensus 19 ~v~~~ltv~N~s~~~v~l~f~Sgq~~Df~v~d~~G~~VwrwS~~~~FtQa~~~~tl~pGE~~~f~~~w~----------- 87 (120)
T 3isy_A 19 QIKFNMSLKNQSERAIEFQFSTGQKFELVVYDSEHKERYRYSKEKMFTQAFQNLTLESGETYDFSDVWK----------- 87 (120)
T ss_dssp CEEEEEEEEECSSSCEEEEESSSCCEEEEEECTTCCEEEETTTTCCCCCCCEEEEECTTCEEEEEEEES-----------
T ss_pred eEEEEEEEEcCCCCcEEEEeCCCCEEEEEEECCCCCEEEEccccchhhhhhceEEECCCCEEEEEEEeC-----------
Confidence 6788899999998888876 77788777 5665541 11 23457899998877766554
Q ss_pred HhhcCCCeeEEEEEEEE
Q 018706 298 DMIRGKGTGYTMKGHID 314 (351)
Q Consensus 298 ~l~~~~~i~Y~l~G~l~ 314 (351)
+ .-.+-.|++.+.+.
T Consensus 88 ~--~~~pG~Ytl~a~l~ 102 (120)
T 3isy_A 88 E--VPEPGTYEVKVTFK 102 (120)
T ss_dssp S--CCCSEEEEEEEEEC
T ss_pred C--CCCCccEEEEEEEE
Confidence 0 11245899998885
No 26
>1yew_A Particulate methane monooxygenase, B subunit; membrane protein, beta barrel, oxidoreductase; 2.80A {Methylococcus capsulatus} PDB: 3rgb_A
Probab=36.91 E-value=1.2e+02 Score=29.24 Aligned_cols=89 Identities=13% Similarity=0.261 Sum_probs=53.7
Q ss_pred eeeeeeecc---ccCCCCCCceeeeeeeEEeec--ccceEEEEEEEEECCCCcccccCCeEEE-E-EEC--------CeE
Q 018706 197 LTLPLEKNG---EIPIPYKPDIDLEKIKFERFS--FEETVAILHLKLENKNDFDLALNSLDYE-V-WLS--------DAS 261 (351)
Q Consensus 197 ~tiP~e~sG---ei~lp~~P~v~i~~v~~~~vs--~~~t~~~l~l~V~NPN~fpL~i~~l~Y~-l-~ln--------G~~ 261 (351)
.+||+...- .-|+|.-+. ...+++.+++ ..+=.+.++++|+|-.+-|+.+.++.-. | .+| +-+
T Consensus 228 ~tiPlQag~~~~i~Pl~~~~~--~V~~~v~~A~Y~vpgR~l~~~~~VtN~g~~pvrlgeF~tA~vrFln~~~~~~~~~~P 305 (382)
T 1yew_A 228 ITIPLQAGTMRGMKPLELPAP--TVSVKVEDATYRVPGRAMRMKLTITNHGNSPIRLGEFYTASVRFLDSDVYKDTTGYP 305 (382)
T ss_dssp CCCCCCCCCBCCCCCCCCCCC--SEEEEEEEEEEESSCSEEEEEEEEEECSSSCEEEEEEECSSCEEECTTTCCCCSCCC
T ss_pred CcccccccccccccccCCCCC--ceEEEeeccEEecCCcEEEEEEEEEcCCCCceEeeeEEeccEEEeCCcccccCCCCh
Confidence 477875332 345553332 2233333333 3456899999999999999998755321 0 111 111
Q ss_pred ---EEE-E-EeCCceEEcCCCeEEEEEEEEe
Q 018706 262 ---IGA-A-ELTKSAKIDKNGISYIDIPITF 287 (351)
Q Consensus 262 ---ia~-G-~~~~~~~I~~~g~t~i~Vpvtv 287 (351)
++. | +..+..-|.|+.+.++.|.++=
T Consensus 306 ~~lla~~gL~vsd~~pI~PGETr~~~v~a~d 336 (382)
T 1yew_A 306 EDLLAEDGLSVSDNSPLAPGETRTVDVTASD 336 (382)
T ss_dssp GGGEETTCEEESCCSCBCTTCEEEEEEEEEC
T ss_pred HHhhccCCceeCCCCCcCCCceeEEEEEeeh
Confidence 333 3 4466677999999999988773
No 27
>1jz7_A Lactase, beta-galactosidase, LACZ; TIM barrel (alpha/beta barrel), jelly-roll barrel, immunoglobulin, beta supersandwich, hydrolase; HET: GAL; 1.50A {Escherichia coli} SCOP: b.1.4.1 b.1.4.1 b.18.1.5 b.30.5.1 c.1.8.3 PDB: 1hn1_A 1jyx_A* 1jz3_A* 1jz4_A* 1jz5_A* 1jz6_A* 1dp0_A* 3iap_A* 1jz8_A* 1jyn_A* 1jyv_A* 1jyw_A* 3iaq_A* 1px3_A 1px4_A* 3czj_A* 3i3e_A 3i3d_A* 3i3b_A 3dym_A ...
Probab=33.81 E-value=48 Score=36.35 Aligned_cols=48 Identities=17% Similarity=0.336 Sum_probs=39.5
Q ss_pred EEEEECCCCc-ccccCCeEEEEEECCeEEEEEEeCCceEEcCCCeEEEEEE
Q 018706 235 HLKLENKNDF-DLALNSLDYEVWLSDASIGAAELTKSAKIDKNGISYIDIP 284 (351)
Q Consensus 235 ~l~V~NPN~f-pL~i~~l~Y~l~lnG~~ia~G~~~~~~~I~~~g~t~i~Vp 284 (351)
.+.|.|.+.| ++.=-.+.|+|..+|+.+.+|++. ..|+|++++.+.+|
T Consensus 635 ~~~v~N~~~f~~l~~~~~~~~~~~~g~~~~~g~~~--~~v~p~~~~~~~l~ 683 (1023)
T 1jz7_A 635 TIEVTSEYLFRHSDNELLHWMVALDGKPLASGEVP--LDVAPQGKQLIELP 683 (1023)
T ss_dssp EEEEEECCSSCCCTTCEEEEEEEETTEEEEEEEEE--CCCCTTCEEEEECC
T ss_pred eEEEEeeeEeccCcccEEEEEEEECceEEEeeeEe--eeECCCceEEEEec
Confidence 4899999975 344446788999999999999985 47999999988887
No 28
>3qis_A Inositol polyphosphate 5-phosphatase OCRL-1; DENT disease, RAC1, RAB gtpases, APPL1, endocytic PATH golgi complex, hydrolase-protein binding complex; 2.30A {Homo sapiens} PDB: 2qv2_A
Probab=33.52 E-value=2.6e+02 Score=26.41 Aligned_cols=80 Identities=11% Similarity=0.136 Sum_probs=52.0
Q ss_pred CCCeEEEE--eEEecccccceeEEEEEEEEECCCCCCeeeeceEEEEEECCEE----EEEEEcCCceeecCCCeEEEEEE
Q 018706 85 GKPTADVT--AVHIPKINLERADIVIDVLIKNPNPIPIPLIDINYLVESDGRK----LVSGLIPDSGTIHAHGEETVKIP 158 (351)
Q Consensus 85 ~~P~Vsv~--~v~i~~vs~~~~~l~v~l~V~NPNp~~L~l~~i~Y~l~~nG~~----vasG~~~~~~~Ipa~g~t~v~vp 158 (351)
..|.|++. .++|+.+... ....-.+.|.|-..+|....=+. .-++.. +.+- .+..++|+++++..|.+.
T Consensus 26 ~~P~v~v~~~~idFg~v~~~-~~~~~~l~i~N~g~~pa~f~f~~---~~~~~~~~~~wl~v-~p~~g~l~Pge~~~i~l~ 100 (366)
T 3qis_A 26 FLPSLELSRREFVFENVKFR-QLQKEKFQISNNGQVPCHFSFIP---KLNDSQYCKPWLRA-EPFEGYLEPNETVDISLD 100 (366)
T ss_dssp --CCEEESCSEEEEEEECBT-CCEEEEEEEEECSSSCEEEEEEC---CTTCSSSSCTTEEE-ESCEEEECTTCEEEEEEE
T ss_pred cCCeEEEecCeEEeeeeeeC-CeEEEEEEEEecCCceEEEEEEe---CCCCCCCCCCcEEE-eCCccEECCCCEEEEEEE
Confidence 45777776 6778888776 46677899999999988762110 011111 1112 266789999999999999
Q ss_pred EEEehhhHHHHH
Q 018706 159 VTLIYDDIKNAY 170 (351)
Q Consensus 159 v~l~~~~L~~~l 170 (351)
+.++.. ...++
T Consensus 101 ~~v~~~-~~~~l 111 (366)
T 3qis_A 101 VYVSKD-SVTIL 111 (366)
T ss_dssp ECBCTT-THHHH
T ss_pred EEECHH-HHHHH
Confidence 988873 33444
No 29
>3nqn_A Uncharacterized protein; protein with unknown function, structural genomics, joint CE structural genomics, JCSG; HET: MSE; 1.88A {Deinococcus radiodurans}
Probab=31.52 E-value=2.2e+02 Score=24.10 Aligned_cols=25 Identities=28% Similarity=0.601 Sum_probs=21.1
Q ss_pred eEEEEEEEEEecccccceeeeeeec
Q 018706 180 PYKIKVDLIVDVPVFGRLTLPLEKN 204 (351)
Q Consensus 180 ~Y~l~g~l~vd~pilG~~tiP~e~s 204 (351)
.-++.|.+....|++|.+++||...
T Consensus 45 g~~l~G~Lr~~~PllGEv~lPF~Sr 69 (158)
T 3nqn_A 45 GEQVWGELLVTVPLLGEVDLPFRSE 69 (158)
T ss_dssp SSEEEEEEEEEETTTEEEEEEEEEE
T ss_pred cceeEEEEEecccccceeecchhee
Confidence 3468899999999999999999754
No 30
>1yq2_A Beta-galactosidase; glycosyl hydrolase family 2, TIM barrel, hexamer; 1.90A {Arthrobacter SP} SCOP: b.1.4.1 b.1.4.1 b.18.1.5 b.30.5.1 c.1.8.3
Probab=30.13 E-value=57 Score=35.74 Aligned_cols=49 Identities=24% Similarity=0.405 Sum_probs=39.9
Q ss_pred EEEEECCCCCC-eeeeceEEEEEECCEEEEEEEcC----CceeecCCCeEEEEEE
Q 018706 109 DVLIKNPNPIP-IPLIDINYLVESDGRKLVSGLIP----DSGTIHAHGEETVKIP 158 (351)
Q Consensus 109 ~l~V~NPNp~~-L~l~~i~Y~l~~nG~~vasG~~~----~~~~Ipa~g~t~v~vp 158 (351)
.+.|.|-+.|. +.=..+.|+|..||+.+.+|... . ..|+++++.++++|
T Consensus 625 ~~~v~N~~~f~~l~~~~~~w~~~~~g~~~~~g~~~~~~~~-~~~~p~~~~~~~l~ 678 (1024)
T 1yq2_A 625 TLAVANLRHTADASDVVLRWRVEHDGAVAASGEVAAEGSD-GPLRAGESATIALP 678 (1024)
T ss_dssp EEEEEECCSSCCSTTEEEEEEEEETTEEEEEEEEECBCSS-SBCCTTCEEEEECC
T ss_pred eEEEEEccCCCCCccCeEEEEEEECCEEEEeeEEeccccC-ccCCCCCceEEEec
Confidence 37889998765 34457789999999999999982 2 58999999998887
No 31
>3qbt_B Inositol polyphosphate 5-phosphatase OCRL-1; protein transport, vesicular trafficking, GTPase, LOWE syndr immunoglobulin fold, RAB8A, endocytosis; HET: GNP; 2.00A {Homo sapiens}
Probab=29.43 E-value=2.3e+02 Score=22.99 Aligned_cols=73 Identities=15% Similarity=0.189 Sum_probs=46.2
Q ss_pred CCceee--eeeeEEeecccceEEEEEEEEECCCCcccccCCeEEEEEECCe----EEEEEEeCCceEEcCCCeEEEEEEE
Q 018706 212 KPDIDL--EKIKFERFSFEETVAILHLKLENKNDFDLALNSLDYEVWLSDA----SIGAAELTKSAKIDKNGISYIDIPI 285 (351)
Q Consensus 212 ~P~v~i--~~v~~~~vs~~~t~~~l~l~V~NPN~fpL~i~~l~Y~l~lnG~----~ia~G~~~~~~~I~~~g~t~i~Vpv 285 (351)
.|.+++ ..++|+.+.+.... .-.|.|.|-...|..+.- ....++. ++-.- .+..+.|+|+++..|.|.+
T Consensus 24 ~P~i~v~~~~ldFG~v~~~~~~-~~~l~I~Ntg~vpa~F~f---~~~~~~~~~~~~wl~v-~P~~G~L~Pge~~~I~v~~ 98 (140)
T 3qbt_B 24 LPSLELSRREFVFENVKFRQLQ-KEKFQISNNGQVPCHFSF---IPKLNDSQYCKPWLRA-EPFEGYLEPNETVDISLDV 98 (140)
T ss_dssp SCCEEESCCEEEEEEECBTCCE-EEEEEEEECSSSCEEEEE---ECCTTCSSSSCTTEEE-ESCEEEECTTCEEEEEEEE
T ss_pred CCceEeeeeeEEeeeceeeeee-eeEEEEEcCCccceEEEE---ecCCCchhhhhHhhhc-CCcccccCCCCeeEEEEEE
Confidence 355443 46777777766554 557888888877765322 1111111 11111 3667899999999999999
Q ss_pred Eecc
Q 018706 286 TFRP 289 (351)
Q Consensus 286 tv~~ 289 (351)
.++.
T Consensus 99 ~v~~ 102 (140)
T 3qbt_B 99 YVSK 102 (140)
T ss_dssp CBCH
T ss_pred EEcc
Confidence 9865
No 32
>3bga_A Beta-galactosidase; NYSGXRC, protein structure initiative II (PSI-II), glycosyl hydrolase family 2, jelly-roll fold; 2.10A {Bacteroides thetaiotaomicron vpi-5482} PDB: 3dec_A
Probab=29.39 E-value=58 Score=35.62 Aligned_cols=48 Identities=15% Similarity=0.201 Sum_probs=39.8
Q ss_pred EEEEECCCCcccccC--CeEEEEEE-CCeEEEEEEeCCceEEcCCCeEEEEEEE
Q 018706 235 HLKLENKNDFDLALN--SLDYEVWL-SDASIGAAELTKSAKIDKNGISYIDIPI 285 (351)
Q Consensus 235 ~l~V~NPN~fpL~i~--~l~Y~l~l-nG~~ia~G~~~~~~~I~~~g~t~i~Vpv 285 (351)
.++|.|.+.|. +++ .+.|+|.. +|+.+.+|++. ..|+|+++..+.+|.
T Consensus 631 ~~~v~N~~~F~-~l~~~~~~w~l~~~~G~~~~~g~~~--~~v~p~~~~~~~l~~ 681 (1010)
T 3bga_A 631 KVCIKNWYDFS-NLNEYILRWNVKGEDGTVLAEGTKE--VDCEPHATVDVTLGA 681 (1010)
T ss_dssp EEEEEECCSSC-CGGGEEEEEEEEETTCCEEEEEEEC--CCCCTTCEEEEECCC
T ss_pred EEEEEeccccC-CCcccEEEEEEEEcCceEEEEeEEE--eeeCCCCcEEEEccC
Confidence 58999999774 444 56788888 99999999996 479999999988874
No 33
>3isy_A Bsupi, intracellular proteinase inhibitor; intracellular proteinase inhibitor bsupi, beta sandwich, GRE structural genomics; HET: PG4; 2.61A {Bacillus subtilis}
Probab=29.38 E-value=53 Score=26.65 Aligned_cols=54 Identities=9% Similarity=0.045 Sum_probs=36.2
Q ss_pred EEEEEEEEECCCCCCeee---eceEEEEEE---CCEEEEE---EE----cCCceeecCCCeEEEEEE
Q 018706 105 DIVIDVLIKNPNPIPIPL---IDINYLVES---DGRKLVS---GL----IPDSGTIHAHGEETVKIP 158 (351)
Q Consensus 105 ~l~v~l~V~NPNp~~L~l---~~i~Y~l~~---nG~~vas---G~----~~~~~~Ipa~g~t~v~vp 158 (351)
.+.+.+.|.||...++.+ ++..|++.+ +|.++=. +. .....+|+++.+.+....
T Consensus 19 ~v~~~ltv~N~s~~~v~l~f~Sgq~~Df~v~d~~G~~VwrwS~~~~FtQa~~~~tl~pGE~~~f~~~ 85 (120)
T 3isy_A 19 QIKFNMSLKNQSERAIEFQFSTGQKFELVVYDSEHKERYRYSKEKMFTQAFQNLTLESGETYDFSDV 85 (120)
T ss_dssp CEEEEEEEEECSSSCEEEEESSSCCEEEEEECTTCCEEEETTTTCCCCCCCEEEEECTTCEEEEEEE
T ss_pred eEEEEEEEEcCCCCcEEEEeCCCCEEEEEEECCCCCEEEEccccchhhhhhceEEECCCCEEEEEEE
Confidence 788999999999999998 677777776 6766542 21 112345666655554444
No 34
>4ay0_A Chaperone protein CAF1M; amino acid motifs, bacterial capsules, bacterial proteins, gene expression regulation, molecular chaperones, binding; 1.52A {Yersinia pestis} PDB: 1p5v_A 1p5u_A 1z9s_A 2os7_A 3dos_A 3dpb_A 3dsn_A 4b0m_M 4az8_A 4ayf_A
Probab=24.18 E-value=77 Score=28.11 Aligned_cols=151 Identities=16% Similarity=0.111 Sum_probs=78.4
Q ss_pred EEEEEECCCCCCeeeeceEEEEE-ECCEEEE---EEEcCCceeecCCCeEEEEEEEEEehhhHHHHHhccCCCceeeEEE
Q 018706 108 IDVLIKNPNPIPIPLIDINYLVE-SDGRKLV---SGLIPDSGTIHAHGEETVKIPVTLIYDDIKNAYDDIKPGMIIPYKI 183 (351)
Q Consensus 108 v~l~V~NPNp~~L~l~~i~Y~l~-~nG~~va---sG~~~~~~~Ipa~g~t~v~vpv~l~~~~L~~~l~~l~~~e~i~Y~l 183 (351)
+.+.|.|....|.-+.. -|+ -++.+-. =-..+-...|.++....++|--+ . ..+..+.+.-|++
T Consensus 30 ~sl~l~N~~~~p~LvQs---wv~~~~~~~~~~~pFivtPPl~Rl~p~~~q~lRI~~~-~--------~~LP~DRESlf~l 97 (218)
T 4ay0_A 30 VMVSVKNTQDYPVLIQS---RIYDENKEKESEDPFVVTPPLFRLDAKQQNSLRIAQA-G--------GVFPRDKESLKWL 97 (218)
T ss_dssp EEEEEECCSSSCEEEEE---EEECTTSCCCSSCSEEEESSEEEECTTCEEEEEEEEC-S--------CCCCSSSCEEEEE
T ss_pred EEEEEEcCCCCCEEEEE---EEecCCCCccccCCEEECCCeEEeCCCCceEEEEEec-C--------CCCCcCcEEEEEE
Confidence 46889999887765532 111 1221100 01234456888888888777321 1 2244555666666
Q ss_pred EEEEEEecccccceeeeeeeccccCCCCCCc-e------eeeeeeEEeecccceEEEEEEEEECCCCcccccCCeEEEEE
Q 018706 184 KVDLIVDVPVFGRLTLPLEKNGEIPIPYKPD-I------DLEKIKFERFSFEETVAILHLKLENKNDFDLALNSLDYEVW 256 (351)
Q Consensus 184 ~g~l~vd~pilG~~tiP~e~sGei~lp~~P~-v------~i~~v~~~~vs~~~t~~~l~l~V~NPN~fpL~i~~l~Y~l~ 256 (351)
...-.=..+--..-.+-+...-.|+|.|.|. + ...+++|..-+. .|.|.||-+|=+.|.+ |.
T Consensus 98 nv~eIPp~~~~~~n~lqia~r~rIKlFyRP~~L~~~~~~~~~~L~~~~~g~-------~l~v~NptPyyvtl~~----l~ 166 (218)
T 4ay0_A 98 CVKGIPPKDEDIWVDVQFAINNCIKLLVRPNELKGTPIQFAENLSWKVDGG-------KLIAENPSPFYMNIGE----LT 166 (218)
T ss_dssp EEEEECC--------------CEEEEEEECTTCCSCGGGTGGGCEEEEETT-------EEEEEECSSSCEEEEE----EE
T ss_pred EEEecCCCCccccceeEEEEEEEEEEEEcCcccCCChhHhhhceEEEEeCC-------EEEEECCCCCEEEEEE----EE
Confidence 6544210000000112222333455555553 1 123456654221 3889999999999864 56
Q ss_pred ECCeEEEEEEeCCceEEcCCCeEEEEEEEEe
Q 018706 257 LSDASIGAAELTKSAKIDKNGISYIDIPITF 287 (351)
Q Consensus 257 lnG~~ia~G~~~~~~~I~~~g~t~i~Vpvtv 287 (351)
++|+.+. ..-|+|+++..+.+|-.+
T Consensus 167 ~~g~~i~------~~mv~P~s~~~~~l~~~~ 191 (218)
T 4ay0_A 167 FGGKSIP------SHYIPPKSTWAFDLPKGL 191 (218)
T ss_dssp ETTEECC------CCEECTTEEEEEEC---C
T ss_pred ECCEEcc------CcEECCCCeeEEECCcCC
Confidence 7887653 356889998888877543
No 35
>2r39_A FIXG-related protein; structural GE PSI-2, protein structure initiative, midwest center for STR genomics, MCSG, iron, iron-sulfur; 2.02A {Vibrio parahaemolyticus}
Probab=23.79 E-value=1.7e+02 Score=22.87 Aligned_cols=55 Identities=13% Similarity=0.210 Sum_probs=36.9
Q ss_pred eEEEEEEEEECCCCcccccCCeEEEEEECC---eEEEEEEeCCceEEcCCCeEEEEEEEEecccch
Q 018706 230 TVAILHLKLENKNDFDLALNSLDYEVWLSD---ASIGAAELTKSAKIDKNGISYIDIPITFRPKDF 292 (351)
Q Consensus 230 t~~~l~l~V~NPN~fpL~i~~l~Y~l~lnG---~~ia~G~~~~~~~I~~~g~t~i~Vpvtv~~~~~ 292 (351)
++=.-.|+|.|.-..+ ..|+|.+.| ..+.. +....|+|++...+.|-+++++..+
T Consensus 31 I~N~Ytlki~Nkt~~~-----~~~~l~v~g~~~l~~~g---~~~i~v~~g~~~~~~v~v~~~~~~~ 88 (118)
T 2r39_A 31 VENTYTLKVINKTQQV-----QEYNLDVKGLNDVSWYG---KQTIQVEPGEVLNLPMSLGADPDKL 88 (118)
T ss_dssp EEEEEEEEEEECSSSC-----EEEEEEEESCSSCEEES---CCEEEECTTCEEEEEEEEEECGGGC
T ss_pred EEEEEEEEEEECCCCC-----EEEEEEEeCCcccEEeC---CCcEEECCCCEEEEEEEEEEChHHc
Confidence 4444557777777655 456666644 33322 2358999999999999999977553
No 36
>1vjj_A Protein-glutamine glutamyltransferase E; transglutaminase 3, X-RAY crystallography, metalloenzyme, calcium ION; HET: GDP; 1.90A {Homo sapiens} SCOP: b.1.18.9 b.1.5.1 b.1.5.1 d.3.1.4 PDB: 1sgx_A* 1l9m_A 1l9n_A* 1nud_A 1nuf_A 1nug_A 1rle_A*
Probab=23.18 E-value=65 Score=33.78 Aligned_cols=67 Identities=24% Similarity=0.341 Sum_probs=38.0
Q ss_pred CCCeEEEEeEEecccccceeEEEEEEEEECCCCCCeeeeceEEEEEECCEEEEEE-EcCCceeecCCCeEEEEEE
Q 018706 85 GKPTADVTAVHIPKINLERADIVIDVLIKNPNPIPIPLIDINYLVESDGRKLVSG-LIPDSGTIHAHGEETVKIP 158 (351)
Q Consensus 85 ~~P~Vsv~~v~i~~vs~~~~~l~v~l~V~NPNp~~L~l~~i~Y~l~~nG~~vasG-~~~~~~~Ipa~g~t~v~vp 158 (351)
..|.++|. +.+--.-...+.+.+.++||.+ .+|.+..+.|+--|. ..+ ..-....|+++++..+.+.
T Consensus 592 ~~P~l~I~---v~g~~~v~~~l~v~v~f~NPL~--~~L~~c~~~vEG~GL--~~~~~~~~~~~v~pg~~~~~~~~ 659 (692)
T 1vjj_A 592 DNPTLTLE---VLNEARVRKPVNVQMLFSNPLD--EPVRDCVLMVEGSGL--LLGNLKIDVPTLGPKERSRVRFD 659 (692)
T ss_dssp BCCCEEEE---ECSCCBTTSCEEEEEEEECCSS--SCBCSEEEEEECTTT--SSSCEEEEECCBCTTCEEEEEEE
T ss_pred cCCCEEEE---eCCCcccCCeEEEEEEEECCCC--CcccceEEEEECCCC--CCCceEEEcCccCCCCEEEEEEE
Confidence 56666443 3333344677899999999988 556677666664442 111 0111245666655555444
No 37
>2e6j_A Hydin protein; PAPD, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=22.66 E-value=2e+02 Score=21.54 Aligned_cols=68 Identities=16% Similarity=0.210 Sum_probs=41.4
Q ss_pred CeEEE--EeEEecccccceeEEEEEEEEECCCCCCeeeeceEEEEEECCEEEE--EEEcCCceeecCCCeEEEEEEEE
Q 018706 87 PTADV--TAVHIPKINLERADIVIDVLIKNPNPIPIPLIDINYLVESDGRKLV--SGLIPDSGTIHAHGEETVKIPVT 160 (351)
Q Consensus 87 P~Vsv--~~v~i~~vs~~~~~l~v~l~V~NPNp~~L~l~~i~Y~l~~nG~~va--sG~~~~~~~Ipa~g~t~v~vpv~ 160 (351)
|++++ ..++++.+.... .....+.+.|.-.+|+.+.-.. +..... --..+..+.|+++++..+.+...
T Consensus 8 P~i~~~~~~ldFG~v~~g~-~~~~~~~l~N~g~~p~~~~~~~-----~~~~~~~~f~v~p~~g~i~pg~~~~i~V~f~ 79 (112)
T 2e6j_A 8 PKIHFNFELLDIGKVFTGS-AHCYEAILYNKGSIDALFNMTP-----PTSALGACFVFSPKEGIIEPSGVQAIQISFS 79 (112)
T ss_dssp CSEEESCSEEEEEEEESSC-CEEEEEEEEECCSSCEEEEECC-----CSSHHHHHCEEESSEEEECTTBCCEEEEEEC
T ss_pred CEEEECcccEecEeEEECC-EEEEEEEEEECCcceEEEEEec-----CCccccCcEEEECCcCEECCCCEEEEEEEEE
Confidence 55554 356677776654 4677899999999988874321 110000 11135567888888777666544
No 38
>3mnm_A ADP-ribosylation factor-binding protein GGA2; IG-like, beta sandwich, protein transport; HET: MLY; 1.73A {Saccharomyces cerevisiae}
Probab=22.66 E-value=2.9e+02 Score=21.97 Aligned_cols=90 Identities=17% Similarity=0.213 Sum_probs=51.7
Q ss_pred EEEEEEEEECCCCCCeeeeceEEEEEEC-CEEEEEEEcCCceeecCCCeEEEEEEEEEehhhHHHHHhccCCCceeeEEE
Q 018706 105 DIVIDVLIKNPNPIPIPLIDINYLVESD-GRKLVSGLIPDSGTIHAHGEETVKIPVTLIYDDIKNAYDDIKPGMIIPYKI 183 (351)
Q Consensus 105 ~l~v~l~V~NPNp~~L~l~~i~Y~l~~n-G~~vasG~~~~~~~Ipa~g~t~v~vpv~l~~~~L~~~l~~l~~~e~i~Y~l 183 (351)
.+.+.+...|-.+ -+|.++.|.+.+- +.++ +-.-+....|++++...++=.+.+.+.. -..+..+..|+
T Consensus 32 ~~~i~~~fsN~s~--~~it~f~fqaAVPKs~kL-~L~p~Sg~~L~p~~~~~itQ~~~I~n~~-------~~~~~~lklR~ 101 (123)
T 3mnm_A 32 VIRIXSFFTNLSS--SPISNLVFLLAVPKSMSL-XLQPQSSNFMIGNAKDGISQEGTIENAP-------ANPSKALXVKW 101 (123)
T ss_dssp CEEEEEEEEECSS--SCEEEEEEEEECCTTSEE-EECCCSCSCBCTTCTTCEEEEEEEESCC-------CC---CCEEEE
T ss_pred eEEEEEEEecCCC--CccccEEEEEecCcccEE-EeECCCcCccCCCCCCCEEEEEEEecCC-------CCCCCCEEEEE
Confidence 4666777778665 4588888887763 3444 3333445578888555555555555421 01134555555
Q ss_pred EEEEEEecccccceeeeeeeccccCCCC
Q 018706 184 KVDLIVDVPVFGRLTLPLEKNGEIPIPY 211 (351)
Q Consensus 184 ~g~l~vd~pilG~~tiP~e~sGei~lp~ 211 (351)
+.+..+ . | -|++..|++.||.
T Consensus 102 klsY~~--~--g---~~~~E~g~~~lp~ 122 (123)
T 3mnm_A 102 KVNYSV--N--S---TQAEETAVFTLPN 122 (123)
T ss_dssp EEEEEE--T--T---EEEEEEEEEECCC
T ss_pred EEEEEE--C--C---eEEEEEEEEecCC
Confidence 555543 2 2 2577888887764
No 39
>3bga_A Beta-galactosidase; NYSGXRC, protein structure initiative II (PSI-II), glycosyl hydrolase family 2, jelly-roll fold; 2.10A {Bacteroides thetaiotaomicron vpi-5482} PDB: 3dec_A
Probab=20.87 E-value=1e+02 Score=33.70 Aligned_cols=49 Identities=22% Similarity=0.230 Sum_probs=39.2
Q ss_pred EEEEECCCCCC-eeeeceEEEEEE-CCEEEEEEEcCCceeecCCCeEEEEEEE
Q 018706 109 DVLIKNPNPIP-IPLIDINYLVES-DGRKLVSGLIPDSGTIHAHGEETVKIPV 159 (351)
Q Consensus 109 ~l~V~NPNp~~-L~l~~i~Y~l~~-nG~~vasG~~~~~~~Ipa~g~t~v~vpv 159 (351)
.+.|.|-+.|. +.=-.+.|+|.. ||+.+.+|... ..|+++++.++++|+
T Consensus 631 ~~~v~N~~~F~~l~~~~~~w~l~~~~G~~~~~g~~~--~~v~p~~~~~~~l~~ 681 (1010)
T 3bga_A 631 KVCIKNWYDFSNLNEYILRWNVKGEDGTVLAEGTKE--VDCEPHATVDVTLGA 681 (1010)
T ss_dssp EEEEEECCSSCCGGGEEEEEEEEETTCCEEEEEEEC--CCCCTTCEEEEECCC
T ss_pred EEEEEeccccCCCcccEEEEEEEEcCceEEEEeEEE--eeeCCCCcEEEEccC
Confidence 58899999653 333466788988 99999999986 589999999987773
No 40
>2g30_A AP-2 complex subunit beta-1; alpha-helical ARH peptide, platform domain, sandwich domain, endocytosis, adaptor, endocytosis/exocytosis complex; 1.60A {Homo sapiens} SCOP: b.1.10.1 d.105.1.1 PDB: 1e42_A 3h1z_A 3hs9_A 2iv9_A 2iv8_A
Probab=20.45 E-value=1.4e+02 Score=27.07 Aligned_cols=63 Identities=8% Similarity=0.093 Sum_probs=43.3
Q ss_pred ecccceEEEEEEEEECCCCcccccCCeEEEEEECCeEEEEEEe-CCceEEcCCCeEEEEEEEEecc
Q 018706 225 FSFEETVAILHLKLENKNDFDLALNSLDYEVWLSDASIGAAEL-TKSAKIDKNGISYIDIPITFRP 289 (351)
Q Consensus 225 vs~~~t~~~l~l~V~NPN~fpL~i~~l~Y~l~lnG~~ia~G~~-~~~~~I~~~g~t~i~Vpvtv~~ 289 (351)
+++.+-.+.+.++++|-... ++.++.-++.-|---++-+.. .-+..|+++++..+.||+.++.
T Consensus 50 f~r~~g~i~l~l~~~N~s~~--~is~faIQfNkNsFGL~p~~~~~~~~~L~pgqs~~v~lpl~~~~ 113 (258)
T 2g30_A 50 FTHRQGHIYMEMNFTNKALQ--HMTDFAIQFNKNSFGVIPSTPLAIHTPLMPNQSIDVSLPLNTLG 113 (258)
T ss_dssp EEEETTEEEEEEEEEECSSS--CBCCCEEEECCBTTCCEESSCCCCCSCBCTTCEEEEEEEEESCS
T ss_pred EEEeCCEEEEEEEEecCCcc--ceeeeEEEEcccccCcccCccccCCCccCCCCcEEEEEeeecCC
Confidence 44456678888999987665 777777666655433333332 2236699999999999999855
No 41
>4djm_A DRAB; chaperone, PILI; 2.52A {Escherichia coli}
Probab=20.33 E-value=61 Score=29.24 Aligned_cols=149 Identities=17% Similarity=0.157 Sum_probs=80.3
Q ss_pred EEEEEECCCCCCeeeeceEEEEE-ECCE-EEEEEEcCCceeecCCCeEEEEEEEEEehhhHHHHHhccCCCceeeEEEEE
Q 018706 108 IDVLIKNPNPIPIPLIDINYLVE-SDGR-KLVSGLIPDSGTIHAHGEETVKIPVTLIYDDIKNAYDDIKPGMIIPYKIKV 185 (351)
Q Consensus 108 v~l~V~NPNp~~L~l~~i~Y~l~-~nG~-~vasG~~~~~~~Ipa~g~t~v~vpv~l~~~~L~~~l~~l~~~e~i~Y~l~g 185 (351)
+.+.|.|+...|.-+.. | |+ -++. ..-=-..+-...|.++....++|--+ . ..+..+.+.-|++..
T Consensus 40 ~sl~l~N~~~~P~LvQs--W-v~~~~~~~~~pfivtPPlfRlep~~~q~lRIi~~-~--------~~LP~DRESlf~lnv 107 (239)
T 4djm_A 40 ETLTVINDQDYPMLVQS--E-VLSEDQKSPAPFVVTPPLFRLDGQQSSRLRIVRT-G--------GEFPPDRESLQWICV 107 (239)
T ss_dssp EEEEEEECSSSCEEEEE--E-EECTTSSSBCSEEEESSEEEECTTEEEEEEEEEC-S--------CCCCSSSCEEEEEEE
T ss_pred EEEEEEeCCCCcEEEEE--E-EEcCCCCccCCEEEcCCeEEECCCCceEEEEEEC-C--------CCCCCCceEEEEEEE
Confidence 57788898877654432 1 11 1111 00001223345677888888777321 1 124455566666665
Q ss_pred EEEEeccc-------ccc-------eeeeeeeccccCCCCCCc-ee------eeeeeEEeecccceEEEEEEEEECCCCc
Q 018706 186 DLIVDVPV-------FGR-------LTLPLEKNGEIPIPYKPD-ID------LEKIKFERFSFEETVAILHLKLENKNDF 244 (351)
Q Consensus 186 ~l~vd~pi-------lG~-------~tiP~e~sGei~lp~~P~-v~------i~~v~~~~vs~~~t~~~l~l~V~NPN~f 244 (351)
.-.=..+- -+. ..+-+...-.|+|.|.|. +. -.+++|...+ - .|+|.||-+|
T Consensus 108 ~eIPp~~~~~~~~~~~~~~~~~~~~n~Lqiair~rIKLFyRP~~L~~~~~~a~~~L~~~~~g---~----~l~v~NptPy 180 (239)
T 4djm_A 108 KGIPPKEGDRWAEGKDGEKKADKVSLNVQLSVSSCIKLFVRPPAVKGRPDDVAGKVEWQRAG---N----RLKGVNPTPF 180 (239)
T ss_dssp EEECC------------------CEEEEEEEEEEEEEEEECCTTSCSCHHHHGGGCEEEEET---T----EEEEECCSSS
T ss_pred EecCCCCccccccccccccccccccceEEEEEEEEEeEEEcCcccccCchhhhheeEEEEeC---C----EEEEECCCce
Confidence 43111000 000 023333444456666664 21 2456665421 1 3899999999
Q ss_pred ccccCCeEEEEEECCeEEEEEEeCCceEEcCCCeEEEEEE
Q 018706 245 DLALNSLDYEVWLSDASIGAAELTKSAKIDKNGISYIDIP 284 (351)
Q Consensus 245 pL~i~~l~Y~l~lnG~~ia~G~~~~~~~I~~~g~t~i~Vp 284 (351)
=+.|..+ .++|..+. ...-|+|+++..+.+|
T Consensus 181 yvtl~~l----~~~g~~~~-----~~~mV~P~s~~~~~l~ 211 (239)
T 4djm_A 181 YINLSTL----TVGGKEVK-----EREYIAPFSSREYPLP 211 (239)
T ss_dssp CBCEEEE----EETTEECS-----SCCCBCTTCEEEEECC
T ss_pred EEEEEEE----EECCEecc-----CceeEcCCcceEEEcC
Confidence 9999875 45786653 3456899999888765
Done!