BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 018709
(351 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9LHA4|VA0D2_ARATH V-type proton ATPase subunit d2 OS=Arabidopsis thaliana GN=VHA-D2
PE=2 SV=1
Length = 351
Score = 704 bits (1818), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 330/351 (94%), Positives = 346/351 (98%)
Query: 1 MYGFEAMTFNIHGGYLEAIVRGYRAGLLTAADYNNLCQCETLDDIKMHLSATEYGPYLQN 60
MYGFEA+TFNIHGGYLEAIVRG+RAGLLT ADYNNLCQCE LDDIKMHLSAT+YGPYLQN
Sbjct: 1 MYGFEALTFNIHGGYLEAIVRGHRAGLLTTADYNNLCQCENLDDIKMHLSATKYGPYLQN 60
Query: 61 EPSPLHTTTIVEKCTLKLVDEYKHMLCQATEPLSTFLEYITYGHMIDNVVLIVTGTLHER 120
EPSPLHTTTIVEKCTLKLVD+YKHMLCQATEP+STFLEYI YGHMIDNVVLIVTGTLHER
Sbjct: 61 EPSPLHTTTIVEKCTLKLVDDYKHMLCQATEPMSTFLEYIRYGHMIDNVVLIVTGTLHER 120
Query: 121 DVQELLEKCHPLGMFDSIATLAVAQNMRELYRLVLVDTPLAPYFSECITSEDLDDMNIEI 180
DVQEL+EKCHPLGMFDSIATLAVAQNMRELYRLVLVDTPLAPYFSEC+TSEDLDDMNIEI
Sbjct: 121 DVQELIEKCHPLGMFDSIATLAVAQNMRELYRLVLVDTPLAPYFSECLTSEDLDDMNIEI 180
Query: 181 MRNTLYKAYLEDFYKFCQKLGGATAEIMSDLLAFEADRRAVNITINSIGTELTRDDRRKL 240
MRNTLYKAYLEDFY FCQKLGGATAEIMSDLLAFEADRRAVNITINSIGTELTR+DR+KL
Sbjct: 181 MRNTLYKAYLEDFYNFCQKLGGATAEIMSDLLAFEADRRAVNITINSIGTELTREDRKKL 240
Query: 241 YSNFGLLYPYGHEELAVCEDIDQVRGVMEKYPPYQSIFSKLSYGESQMLDKAFYEEEVKR 300
YSNFGLLYPYGHEELA+CEDIDQVRGVMEKYPPYQ+IFSK+SYGESQMLDKAFYEEEV+R
Sbjct: 241 YSNFGLLYPYGHEELAICEDIDQVRGVMEKYPPYQAIFSKMSYGESQMLDKAFYEEEVRR 300
Query: 301 LCLAFEQQFHYGVFFAYMRLREQEIRNLMWISECVAQNQKSRVHDSVVFIF 351
LCLAFEQQFHY VFFAYMRLREQEIRNLMWISECVAQNQKSR+HDSVV++F
Sbjct: 301 LCLAFEQQFHYAVFFAYMRLREQEIRNLMWISECVAQNQKSRIHDSVVYMF 351
>sp|Q9LJI5|VA0D1_ARATH V-type proton ATPase subunit d1 OS=Arabidopsis thaliana GN=VHA-D1
PE=2 SV=1
Length = 351
Score = 703 bits (1815), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 330/351 (94%), Positives = 346/351 (98%)
Query: 1 MYGFEAMTFNIHGGYLEAIVRGYRAGLLTAADYNNLCQCETLDDIKMHLSATEYGPYLQN 60
MYGFEA+TFNIHGGYLEAIVRG+RAGLLT ADYNNLCQCE LDDIKMHLSAT+YG YLQN
Sbjct: 1 MYGFEALTFNIHGGYLEAIVRGHRAGLLTTADYNNLCQCENLDDIKMHLSATKYGSYLQN 60
Query: 61 EPSPLHTTTIVEKCTLKLVDEYKHMLCQATEPLSTFLEYITYGHMIDNVVLIVTGTLHER 120
EPSPLHTTTIVEKCTLKLVD+YKHMLCQATEP+STFLEYI YGHMIDNVVLIVTGTLHER
Sbjct: 61 EPSPLHTTTIVEKCTLKLVDDYKHMLCQATEPMSTFLEYIRYGHMIDNVVLIVTGTLHER 120
Query: 121 DVQELLEKCHPLGMFDSIATLAVAQNMRELYRLVLVDTPLAPYFSECITSEDLDDMNIEI 180
DVQEL+EKCHPLGMFDSIATLAVAQNMRELYRLVLVDTPLAPYFSEC+TSEDLDDMNIEI
Sbjct: 121 DVQELIEKCHPLGMFDSIATLAVAQNMRELYRLVLVDTPLAPYFSECLTSEDLDDMNIEI 180
Query: 181 MRNTLYKAYLEDFYKFCQKLGGATAEIMSDLLAFEADRRAVNITINSIGTELTRDDRRKL 240
MRNTLYKAYLEDFYKFCQKLGGATAEIMSDLLAFEADRRAVNITINSIGTELTR+DR+KL
Sbjct: 181 MRNTLYKAYLEDFYKFCQKLGGATAEIMSDLLAFEADRRAVNITINSIGTELTREDRKKL 240
Query: 241 YSNFGLLYPYGHEELAVCEDIDQVRGVMEKYPPYQSIFSKLSYGESQMLDKAFYEEEVKR 300
YSNFGLLYPYGHEELA+CEDIDQVRGVMEKYPPYQ+IFSK+SYGESQMLDKAFYEEEV+R
Sbjct: 241 YSNFGLLYPYGHEELAICEDIDQVRGVMEKYPPYQAIFSKMSYGESQMLDKAFYEEEVRR 300
Query: 301 LCLAFEQQFHYGVFFAYMRLREQEIRNLMWISECVAQNQKSRVHDSVVFIF 351
LCLAFEQQFHY VFFAYMRLREQEIRNLMWISECVAQNQKSR+HDSVV++F
Sbjct: 301 LCLAFEQQFHYAVFFAYMRLREQEIRNLMWISECVAQNQKSRIHDSVVYMF 351
>sp|Q8RU33|VA0D_ORYSJ Probable V-type proton ATPase subunit d OS=Oryza sativa subsp.
japonica GN=Os01g0587000 PE=2 SV=1
Length = 351
Score = 692 bits (1787), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 324/351 (92%), Positives = 344/351 (98%)
Query: 1 MYGFEAMTFNIHGGYLEAIVRGYRAGLLTAADYNNLCQCETLDDIKMHLSATEYGPYLQN 60
MYG+E ++FNIH G+LEAIVRG R+GLLTAADYNNLCQCE LDD+KMHL+ATEYGPYLQN
Sbjct: 1 MYGWEMLSFNIHDGFLEAIVRGNRSGLLTAADYNNLCQCENLDDVKMHLTATEYGPYLQN 60
Query: 61 EPSPLHTTTIVEKCTLKLVDEYKHMLCQATEPLSTFLEYITYGHMIDNVVLIVTGTLHER 120
EPSPLHTTTIVEKCTLKLVDEYKHM+CQATEPLSTFL+YITYGHMIDNVVLIVTGTLHER
Sbjct: 61 EPSPLHTTTIVEKCTLKLVDEYKHMMCQATEPLSTFLQYITYGHMIDNVVLIVTGTLHER 120
Query: 121 DVQELLEKCHPLGMFDSIATLAVAQNMRELYRLVLVDTPLAPYFSECITSEDLDDMNIEI 180
DV ELLEKCHPLGMFDSIA+LAVAQNMRELYRLVLVDTPLAPYFSECITSEDLDDMNIEI
Sbjct: 121 DVNELLEKCHPLGMFDSIASLAVAQNMRELYRLVLVDTPLAPYFSECITSEDLDDMNIEI 180
Query: 181 MRNTLYKAYLEDFYKFCQKLGGATAEIMSDLLAFEADRRAVNITINSIGTELTRDDRRKL 240
MRNTLYKAYLEDFYKFC+KLGGATAEIM DLL+FEADRRAVNITINSIGTELTRDDRRKL
Sbjct: 181 MRNTLYKAYLEDFYKFCEKLGGATAEIMCDLLSFEADRRAVNITINSIGTELTRDDRRKL 240
Query: 241 YSNFGLLYPYGHEELAVCEDIDQVRGVMEKYPPYQSIFSKLSYGESQMLDKAFYEEEVKR 300
YSNFGLLYPYGHEELAVCED+DQVRGVMEKYPPYQ+IF+K+SYGESQMLDKAFYEEEV+R
Sbjct: 241 YSNFGLLYPYGHEELAVCEDVDQVRGVMEKYPPYQAIFAKISYGESQMLDKAFYEEEVRR 300
Query: 301 LCLAFEQQFHYGVFFAYMRLREQEIRNLMWISECVAQNQKSRVHDSVVFIF 351
LCL+FEQQFHY VFFAY+RLREQEIRNLMWISECVAQNQK+RVHDSVVFIF
Sbjct: 301 LCLSFEQQFHYAVFFAYIRLREQEIRNLMWISECVAQNQKNRVHDSVVFIF 351
>sp|P54641|VA0D_DICDI V-type proton ATPase subunit d OS=Dictyostelium discoideum
GN=vatD-1 PE=1 SV=2
Length = 356
Score = 447 bits (1149), Expect = e-125, Method: Compositional matrix adjust.
Identities = 204/338 (60%), Positives = 269/338 (79%), Gaps = 2/338 (0%)
Query: 8 TFNIHGGYLEAIVRGYRAGLLTAADYNNLCQCETLDDIKMHLSATEYGPYLQNEPSPLHT 67
TFN GYLEAI+RG++ G+L+ ADYNNLCQC+ L+D+KMH +T+YG +L EPSP+HT
Sbjct: 14 TFNKDDGYLEAILRGFKKGILSRADYNNLCQCDNLEDMKMHFISTDYGDFLAGEPSPIHT 73
Query: 68 TTIVEKCTLKLVDEYKHMLCQATEPLSTFLEYITYGHMIDNVVLIVTGTLHERDVQELLE 127
TTI EK T KLV E+ H+ QA EPLSTF+++I+YG+MIDNVVL++TGTLHERD+ EL++
Sbjct: 74 TTIAEKATGKLVSEFNHIRNQAVEPLSTFMDFISYGYMIDNVVLLITGTLHERDISELVD 133
Query: 128 KCHPLGMFDSIATLAVAQNMRELYRLVLVDTPLAPYFSECITSEDLDDMNIEIMRNTLYK 187
KCHPLG+F S+ATL+V N+ +LY VL+DTPLAPY C++ EDLD+MNIEI+RNTLYK
Sbjct: 134 KCHPLGLFKSMATLSVVHNVADLYNNVLIDTPLAPYIQGCLSEEDLDEMNIEIIRNTLYK 193
Query: 188 AYLEDFYKFCQKLGGATAEIMSDLLAFEADRRAVNITINSIG-TELTRDDRRKLYSNFGL 246
AYLEDFY +C+ LGG T IMSD+L FEADRR++NITINS G TEL++DDR KLY + GL
Sbjct: 194 AYLEDFYNYCKYLGGQTELIMSDILKFEADRRSINITINSFGATELSKDDREKLYPSLGL 253
Query: 247 LYPYGHEELAVCEDIDQVRGVMEKYPPYQSIFSKLSYGESQMLDKAFYEEEVKRLCLAFE 306
LYP G +L ED+DQVRG++E Y Y++ FS + L+ +F+E EV +AFE
Sbjct: 254 LYPEGTSKLGKAEDVDQVRGILEVYSTYRNFFSD-GVNNEKSLEDSFFEHEVHLNRMAFE 312
Query: 307 QQFHYGVFFAYMRLREQEIRNLMWISECVAQNQKSRVH 344
Q+ YGVF+AY++LREQEIRN++WI+EC++QN K +++
Sbjct: 313 DQYGYGVFYAYIKLREQEIRNIVWIAECISQNMKQKMN 350
>sp|Q9W4P5|VA0D1_DROME V-type proton ATPase subunit d 1 OS=Drosophila melanogaster
GN=VhaAC39-1 PE=2 SV=1
Length = 350
Score = 407 bits (1045), Expect = e-113, Method: Compositional matrix adjust.
Identities = 194/345 (56%), Positives = 259/345 (75%), Gaps = 4/345 (1%)
Query: 9 FNIHGGYLEAIVRGYRAGLLTAADYNNLCQCETLDDIKMHLSATEYGPYLQNEPSPLHTT 68
FNI GYLE + RG++ G+L ADY NL QCETL+D+K+HL T+YG +L NEPSPL +
Sbjct: 8 FNIDNGYLEGLCRGFKCGILKQADYLNLVQCETLEDLKLHLQGTDYGSFLANEPSPLSVS 67
Query: 69 TIVEKCTLKLVDEYKHMLCQATEPLSTFLEYITYGHMIDNVVLIVTGTLHERDVQELLEK 128
I +K KLV E++HM A EPLS FL++ITYG+MIDN++L++TGTLH+R + EL+ K
Sbjct: 68 VIDDKLREKLVIEFQHMRNHAVEPLSNFLDFITYGYMIDNIILLITGTLHQRPISELIPK 127
Query: 129 CHPLGMFDSIATLAVAQNMRELYRLVLVDTPLAPYFSECITSEDLDDMNIEIMRNTLYKA 188
CHPLG F+ + + VA ELY VLVDTPLAP+F +CI+ +DLD+MNIEI+RNTLYKA
Sbjct: 128 CHPLGSFEQMEAIHVASTPAELYNAVLVDTPLAPFFVDCISEQDLDEMNIEIIRNTLYKA 187
Query: 189 YLEDFYKFCQKLGGATAEIMSDLLAFEADRRAVNITINSIGTELTRDDRRKLYSNFGLLY 248
YLE FY FC+ +GGATA++M ++LAFEADRRA+ ITINS GTEL++DDR KLY N G +Y
Sbjct: 188 YLEAFYNFCKNMGGATADVMCEILAFEADRRAIIITINSFGTELSKDDRAKLYPNCGKMY 247
Query: 249 PYGHEELAVCEDIDQVRGVMEKYPPYQSIF--SKLSYGESQMLDKAFYEEEVKRLCLAFE 306
P G LA +D +QV+ V E Y Y ++F S + G+ + DK F+E EVK AF
Sbjct: 248 PDGLAALARADDYEQVKTVAEYYAEYAALFDGSGNNPGDKTLEDK-FFEHEVKLDVYAFL 306
Query: 307 QQFHYGVFFAYMRLREQEIRNLMWISECVAQNQKSRVHDSVVFIF 351
QQFH+GVF+AY++L+EQE RN++WI+ECVAQ ++++ D+ + IF
Sbjct: 307 QQFHFGVFYAYLKLKEQECRNIVWIAECVAQKHRAKI-DNYIPIF 350
>sp|Q25531|VA0D_MANSE V-type proton ATPase subunit d OS=Manduca sexta PE=2 SV=1
Length = 348
Score = 395 bits (1016), Expect = e-109, Method: Compositional matrix adjust.
Identities = 188/345 (54%), Positives = 256/345 (74%), Gaps = 4/345 (1%)
Query: 9 FNIHGGYLEAIVRGYRAGLLTAADYNNLCQCETLDDIKMHLSATEYGPYLQNEPSPLHTT 68
FNI GYLE + RG++ G+L +DY NL QCETL+D+K+HL T+YG +L NEPSPL +
Sbjct: 6 FNIDAGYLEGLCRGFKCGILKQSDYLNLVQCETLEDLKLHLQGTDYGTFLANEPSPLSVS 65
Query: 69 TIVEKCTLKLVDEYKHMLCQATEPLSTFLEYITYGHMIDNVVLIVTGTLHERDVQELLEK 128
TI +K KLV E++H+ + EPLSTFL++ITY +MIDN++L++TGTLH+R + EL+ K
Sbjct: 66 TIDDKLREKLVIEFQHLRNHSVEPLSTFLDFITYSYMIDNIILLITGTLHQRPISELIPK 125
Query: 129 CHPLGMFDSIATLAVAQNMRELYRLVLVDTPLAPYFSECITSEDLDDMNIEIMRNTLYKA 188
CHPLG F+ + + VA ELY VLVDTPLAP+F +CI+ +DLD+MNIEI+RNTLYKA
Sbjct: 126 CHPLGSFEQMEAIHVAATPAELYNAVLVDTPLAPFFVDCISEQDLDEMNIEIIRNTLYKA 185
Query: 189 YLEDFYKFCQKLGGATAEIMSDLLAFEADRRAVNITINSIGTELTRDDRRKLYSNFGLLY 248
YLE FY FC+++GG TA++M ++LAFEADRRA+ ITINS GTEL++DDR KLY G L
Sbjct: 186 YLEAFYDFCKQIGGTTADVMCEILAFEADRRAIIITINSFGTELSKDDRAKLYPRCGKLN 245
Query: 249 PYGHEELAVCEDIDQVRGVMEKYPPYQSIFSKL--SYGESQMLDKAFYEEEVKRLCLAFE 306
P G LA +D +QV+ V E Y Y ++F + G+ + DK F+E EV AF
Sbjct: 246 PDGLAALARADDYEQVKAVAEYYAEYSALFEGAGNNVGDKTLEDK-FFEHEVNLNVHAFL 304
Query: 307 QQFHYGVFFAYMRLREQEIRNLMWISECVAQNQKSRVHDSVVFIF 351
QQFH+GVF++Y++L+EQE RN++WISECVAQ ++++ D+ + IF
Sbjct: 305 QQFHFGVFYSYLKLKEQECRNIVWISECVAQKHRAKI-DNYIPIF 348
>sp|Q5ZHL0|VA0D2_CHICK V-type proton ATPase subunit d 2 OS=Gallus gallus GN=ATP6V0D2 PE=2
SV=1
Length = 351
Score = 393 bits (1009), Expect = e-108, Method: Compositional matrix adjust.
Identities = 179/348 (51%), Positives = 254/348 (72%), Gaps = 1/348 (0%)
Query: 1 MYGFEAMTFNIHGGYLEAIVRGYRAGLLTAADYNNLCQCETLDDIKMHLSATEYGPYLQN 60
M G+ FN+ GYLE +VRG++AG+LT+ADY NL QCETL+D+K+HL T+YG +L N
Sbjct: 1 MPGYSEFYFNVDHGYLEGLVRGFKAGILTSADYVNLAQCETLEDLKLHLQTTDYGNFLAN 60
Query: 61 EPSPLHTTTIVEKCTLKLVDEYKHMLCQATEPLSTFLEYITYGHMIDNVVLIVTGTLHER 120
E PL +TI +K KL+ E+ + A EPL+TFL +ITY +MIDN++L++TGTLH+R
Sbjct: 61 ESGPLTISTIDDKLKTKLLTEFHYFRNHAFEPLTTFLNFITYSYMIDNIILLITGTLHQR 120
Query: 121 DVQELLEKCHPLGMFDSIATLAVAQNMRELYRLVLVDTPLAPYFSECITSEDLDDMNIEI 180
+ EL+ KCHPLG F+ + +++A N EL+ +LVDTPLA +F +C++ DLD+MN+EI
Sbjct: 121 PIAELVPKCHPLGSFEQMEAVSIASNPTELFNAILVDTPLAAFFQDCLSENDLDEMNVEI 180
Query: 181 MRNTLYKAYLEDFYKFCQKLGGATAEIMSDLLAFEADRRAVNITINSIGTELTRDDRRKL 240
MRN LYK+YLE FYKFC+K GG TAEIM +L FEADRRA ITINS GTEL+++DR KL
Sbjct: 181 MRNKLYKSYLEAFYKFCEKQGGTTAEIMKPILEFEADRRAFIITINSFGTELSKEDREKL 240
Query: 241 YSNFGLLYPYGHEELAVCEDIDQVRGVMEKYPPYQSIFSKLSYGESQ-MLDKAFYEEEVK 299
Y G LYP G LA +D +QV+ V + Y Y+++F + + L+ AF+E E+K
Sbjct: 241 YPTCGKLYPEGLHLLANADDYEQVKCVADYYAEYKAVFEGVGNDSGEKTLEDAFFEHEIK 300
Query: 300 RLCLAFEQQFHYGVFFAYMRLREQEIRNLMWISECVAQNQKSRVHDSV 347
LAF QFH+GVF+AY++L+EQE RN++WI+EC++Q ++++++ +
Sbjct: 301 LNVLAFNNQFHFGVFYAYIKLKEQECRNIVWIAECISQRHRTKINNYI 348
>sp|P51863|VA0D1_MOUSE V-type proton ATPase subunit d 1 OS=Mus musculus GN=Atp6v0d1 PE=1
SV=2
Length = 351
Score = 390 bits (1002), Expect = e-108, Method: Compositional matrix adjust.
Identities = 186/352 (52%), Positives = 258/352 (73%), Gaps = 2/352 (0%)
Query: 1 MYGFEAMTFNIHGGYLEAIVRGYRAGLLTAADYNNLCQCETLDDIKMHLSATEYGPYLQN 60
M F + FN+ GYLE +VRG +AG+L+ ADY NL QCETL+D+K+HL +T+YG +L N
Sbjct: 1 MSFFPELYFNVDNGYLEGLVRGLKAGVLSQADYLNLVQCETLEDLKLHLQSTDYGNFLAN 60
Query: 61 EPSPLHTTTIVEKCTLKLVDEYKHMLCQATEPLSTFLEYITYGHMIDNVVLIVTGTLHER 120
E SPL + I +K K+V E++HM A EPL++FL++ITY +MIDNV+L++TGTLH+R
Sbjct: 61 EASPLTVSVIDDKLKEKMVVEFRHMRNHAYEPLASFLDFITYSYMIDNVILLITGTLHQR 120
Query: 121 DVQELLEKCHPLGMFDSIATLAVAQNMRELYRLVLVDTPLAPYFSECITSEDLDDMNIEI 180
+ EL+ KCHPLG F+ + + +AQ ELY +LVDTPLA +F +CI+ +DLD+MNIEI
Sbjct: 121 SIAELVPKCHPLGSFEQMEAVNIAQTPAELYNAILVDTPLAAFFQDCISEQDLDEMNIEI 180
Query: 181 MRNTLYKAYLEDFYKFCQKLGGATAEIMSDLLAFEADRRAVNITINSIGTELTRDDRRKL 240
+RNTLYKAYLE FYKFC LGG TA+ M +L FEADRRA ITINS GTEL+++DR KL
Sbjct: 181 IRNTLYKAYLESFYKFCTLLGGTTADAMCPILEFEADRRAFIITINSFGTELSKEDRAKL 240
Query: 241 YSNFGLLYPYGHEELAVCEDIDQVRGVMEKYPPYQSIFSKL-SYGESQMLDKAFYEEEVK 299
+ + G LYP G +LA +D +QV+ V + YP Y+ +F S + L+ F+E EVK
Sbjct: 241 FPHCGRLYPEGLAQLARADDYEQVKNVADYYPEYKLLFEGAGSNPGDKTLEDRFFEHEVK 300
Query: 300 RLCLAFEQQFHYGVFFAYMRLREQEIRNLMWISECVAQNQKSRVHDSVVFIF 351
LAF QFH+GVF+A+++L+EQE RN++WI+EC+AQ ++++ D+ + IF
Sbjct: 301 LNKLAFLNQFHFGVFYAFVKLKEQECRNIVWIAECIAQRHRAKI-DNYIPIF 351
>sp|Q5R6I1|VA0D1_PONAB V-type proton ATPase subunit d 1 OS=Pongo abelii GN=ATP6V0D1 PE=2
SV=1
Length = 351
Score = 389 bits (999), Expect = e-107, Method: Compositional matrix adjust.
Identities = 185/352 (52%), Positives = 258/352 (73%), Gaps = 2/352 (0%)
Query: 1 MYGFEAMTFNIHGGYLEAIVRGYRAGLLTAADYNNLCQCETLDDIKMHLSATEYGPYLQN 60
M F + FN+ GYLE +VRG +AG+L+ ADY NL QCETL+D+K+HL +T+YG +L N
Sbjct: 1 MSFFPELYFNVDNGYLEGLVRGLKAGVLSQADYLNLVQCETLEDLKLHLQSTDYGNFLAN 60
Query: 61 EPSPLHTTTIVEKCTLKLVDEYKHMLCQATEPLSTFLEYITYGHMIDNVVLIVTGTLHER 120
E SPL + I ++ K+V E++HM A EPL++FL++ITY +MIDNV+L++TGTLH+R
Sbjct: 61 EASPLTVSVIDDRLKEKMVVEFRHMRNHAYEPLASFLDFITYSYMIDNVILLITGTLHQR 120
Query: 121 DVQELLEKCHPLGMFDSIATLAVAQNMRELYRLVLVDTPLAPYFSECITSEDLDDMNIEI 180
+ EL+ KCHPLG F+ + + +AQ ELY +LVDTPLA +F +CI+ +DLD+MNIEI
Sbjct: 121 SIAELVPKCHPLGSFEQMEAVNIAQTPAELYNAILVDTPLAAFFQDCISEQDLDEMNIEI 180
Query: 181 MRNTLYKAYLEDFYKFCQKLGGATAEIMSDLLAFEADRRAVNITINSIGTELTRDDRRKL 240
+RNTLYKAYLE FYKFC LGG TA+ M +L FEADRRA ITINS GTEL+++DR KL
Sbjct: 181 IRNTLYKAYLESFYKFCTLLGGTTADAMCPILEFEADRRAFIITINSFGTELSKEDRAKL 240
Query: 241 YSNFGLLYPYGHEELAVCEDIDQVRGVMEKYPPYQSIFSKL-SYGESQMLDKAFYEEEVK 299
+ + G LYP G +LA +D +QV+ V + YP Y+ +F S + L+ F+E EVK
Sbjct: 241 FPHCGRLYPEGLAQLARADDYEQVKNVADYYPEYKLLFEGAGSNPGDKTLEDRFFEHEVK 300
Query: 300 RLCLAFEQQFHYGVFFAYMRLREQEIRNLMWISECVAQNQKSRVHDSVVFIF 351
LAF QFH+GVF+A+++L+EQE RN++WI+EC+AQ ++++ D+ + IF
Sbjct: 301 LNKLAFLNQFHFGVFYAFVKLKEQECRNIVWIAECIAQRHRAKI-DNYIPIF 351
>sp|P61421|VA0D1_HUMAN V-type proton ATPase subunit d 1 OS=Homo sapiens GN=ATP6V0D1 PE=1
SV=1
Length = 351
Score = 389 bits (999), Expect = e-107, Method: Compositional matrix adjust.
Identities = 185/352 (52%), Positives = 258/352 (73%), Gaps = 2/352 (0%)
Query: 1 MYGFEAMTFNIHGGYLEAIVRGYRAGLLTAADYNNLCQCETLDDIKMHLSATEYGPYLQN 60
M F + FN+ GYLE +VRG +AG+L+ ADY NL QCETL+D+K+HL +T+YG +L N
Sbjct: 1 MSFFPELYFNVDNGYLEGLVRGLKAGVLSQADYLNLVQCETLEDLKLHLQSTDYGNFLAN 60
Query: 61 EPSPLHTTTIVEKCTLKLVDEYKHMLCQATEPLSTFLEYITYGHMIDNVVLIVTGTLHER 120
E SPL + I ++ K+V E++HM A EPL++FL++ITY +MIDNV+L++TGTLH+R
Sbjct: 61 EASPLTVSVIDDRLKEKMVVEFRHMRNHAYEPLASFLDFITYSYMIDNVILLITGTLHQR 120
Query: 121 DVQELLEKCHPLGMFDSIATLAVAQNMRELYRLVLVDTPLAPYFSECITSEDLDDMNIEI 180
+ EL+ KCHPLG F+ + + +AQ ELY +LVDTPLA +F +CI+ +DLD+MNIEI
Sbjct: 121 SIAELVPKCHPLGSFEQMEAVNIAQTPAELYNAILVDTPLAAFFQDCISEQDLDEMNIEI 180
Query: 181 MRNTLYKAYLEDFYKFCQKLGGATAEIMSDLLAFEADRRAVNITINSIGTELTRDDRRKL 240
+RNTLYKAYLE FYKFC LGG TA+ M +L FEADRRA ITINS GTEL+++DR KL
Sbjct: 181 IRNTLYKAYLESFYKFCTLLGGTTADAMCPILEFEADRRAFIITINSFGTELSKEDRAKL 240
Query: 241 YSNFGLLYPYGHEELAVCEDIDQVRGVMEKYPPYQSIFSKL-SYGESQMLDKAFYEEEVK 299
+ + G LYP G +LA +D +QV+ V + YP Y+ +F S + L+ F+E EVK
Sbjct: 241 FPHCGRLYPEGLAQLARADDYEQVKNVADYYPEYKLLFEGAGSNPGDKTLEDRFFEHEVK 300
Query: 300 RLCLAFEQQFHYGVFFAYMRLREQEIRNLMWISECVAQNQKSRVHDSVVFIF 351
LAF QFH+GVF+A+++L+EQE RN++WI+EC+AQ ++++ D+ + IF
Sbjct: 301 LNKLAFLNQFHFGVFYAFVKLKEQECRNIVWIAECIAQRHRAKI-DNYIPIF 351
>sp|P61420|VA0D1_BOVIN V-type proton ATPase subunit d 1 OS=Bos taurus GN=ATP6V0D1 PE=1
SV=1
Length = 351
Score = 389 bits (999), Expect = e-107, Method: Compositional matrix adjust.
Identities = 185/352 (52%), Positives = 258/352 (73%), Gaps = 2/352 (0%)
Query: 1 MYGFEAMTFNIHGGYLEAIVRGYRAGLLTAADYNNLCQCETLDDIKMHLSATEYGPYLQN 60
M F + FN+ GYLE +VRG +AG+L+ ADY NL QCETL+D+K+HL +T+YG +L N
Sbjct: 1 MSFFPELYFNVDNGYLEGLVRGLKAGVLSQADYLNLVQCETLEDLKLHLQSTDYGNFLAN 60
Query: 61 EPSPLHTTTIVEKCTLKLVDEYKHMLCQATEPLSTFLEYITYGHMIDNVVLIVTGTLHER 120
E SPL + I ++ K+V E++HM A EPL++FL++ITY +MIDNV+L++TGTLH+R
Sbjct: 61 EASPLTVSVIDDRLKEKMVVEFRHMRNHAYEPLASFLDFITYSYMIDNVILLITGTLHQR 120
Query: 121 DVQELLEKCHPLGMFDSIATLAVAQNMRELYRLVLVDTPLAPYFSECITSEDLDDMNIEI 180
+ EL+ KCHPLG F+ + + +AQ ELY +LVDTPLA +F +CI+ +DLD+MNIEI
Sbjct: 121 SIAELVPKCHPLGSFEQMEAVNIAQTPAELYNAILVDTPLAAFFQDCISEQDLDEMNIEI 180
Query: 181 MRNTLYKAYLEDFYKFCQKLGGATAEIMSDLLAFEADRRAVNITINSIGTELTRDDRRKL 240
+RNTLYKAYLE FYKFC LGG TA+ M +L FEADRRA ITINS GTEL+++DR KL
Sbjct: 181 IRNTLYKAYLESFYKFCTLLGGTTADAMCPILEFEADRRAFIITINSFGTELSKEDRAKL 240
Query: 241 YSNFGLLYPYGHEELAVCEDIDQVRGVMEKYPPYQSIFSKL-SYGESQMLDKAFYEEEVK 299
+ + G LYP G +LA +D +QV+ V + YP Y+ +F S + L+ F+E EVK
Sbjct: 241 FPHCGRLYPEGLAQLARADDYEQVKNVADYYPEYKLLFEGAGSNPGDKTLEDRFFEHEVK 300
Query: 300 RLCLAFEQQFHYGVFFAYMRLREQEIRNLMWISECVAQNQKSRVHDSVVFIF 351
LAF QFH+GVF+A+++L+EQE RN++WI+EC+AQ ++++ D+ + IF
Sbjct: 301 LNKLAFLNQFHFGVFYAFVKLKEQECRNIVWIAECIAQRHRAKI-DNYIPIF 351
>sp|Q6P335|VA0D2_XENTR V-type proton ATPase subunit d 2 OS=Xenopus tropicalis GN=atp6v0d2
PE=2 SV=1
Length = 350
Score = 374 bits (959), Expect = e-103, Method: Compositional matrix adjust.
Identities = 169/340 (49%), Positives = 244/340 (71%), Gaps = 1/340 (0%)
Query: 9 FNIHGGYLEAIVRGYRAGLLTAADYNNLCQCETLDDIKMHLSATEYGPYLQNEPSPLHTT 68
FN+ GYLE +VRG++ G+L + DY NL QCETL+D+K+HL +T+YG +L NE L +
Sbjct: 8 FNVDSGYLEGLVRGFKGGILRSTDYLNLAQCETLEDLKLHLQSTDYGSFLANETRQLTVS 67
Query: 69 TIVEKCTLKLVDEYKHMLCQATEPLSTFLEYITYGHMIDNVVLIVTGTLHERDVQELLEK 128
I ++ KL+ E+ + A EPL+TFL++ITY +MIDN++L++TGTLH+R + EL+ K
Sbjct: 68 IIDQRLKDKLMAEFHYFRNHAFEPLATFLDFITYSYMIDNIILLITGTLHQRPISELVPK 127
Query: 129 CHPLGMFDSIATLAVAQNMRELYRLVLVDTPLAPYFSECITSEDLDDMNIEIMRNTLYKA 188
CHPLG F+ + + +AQ EL+ ++VDTPLA +F +C++ D+D+MNIEIMRN LYK+
Sbjct: 128 CHPLGSFEQMEAVNIAQTPAELFNAIIVDTPLADFFQDCLSENDMDEMNIEIMRNKLYKS 187
Query: 189 YLEDFYKFCQKLGGATAEIMSDLLAFEADRRAVNITINSIGTELTRDDRRKLYSNFGLLY 248
YLE FYKFC+KLGG T EIM +L FEADRRA ITINS GTEL +++R KLY G L+
Sbjct: 188 YLEAFYKFCKKLGGTTEEIMCPILEFEADRRAFVITINSFGTELNKEEREKLYPTCGRLF 247
Query: 249 PYGHEELAVCEDIDQVRGVMEKYPPYQSIFSKLSYGESQ-MLDKAFYEEEVKRLCLAFEQ 307
P G L +D DQV+ E Y Y+++F + G + L+ F+E EVK LAF
Sbjct: 248 PEGLRMLGNADDQDQVKTTAEYYAEYKALFEGVGIGTGEKTLEDKFFEHEVKMNVLAFNN 307
Query: 308 QFHYGVFFAYMRLREQEIRNLMWISECVAQNQKSRVHDSV 347
QFH+GVF+AY++L+EQE RN++WI+EC++Q ++++++ +
Sbjct: 308 QFHFGVFYAYVKLKEQECRNIVWIAECISQRHRTKINNYI 347
>sp|O13753|VA0D_SCHPO V-type proton ATPase subunit d OS=Schizosaccharomyces pombe (strain
972 / ATCC 24843) GN=vma6 PE=3 SV=1
Length = 343
Score = 367 bits (942), Expect = e-101, Method: Compositional matrix adjust.
Identities = 174/343 (50%), Positives = 249/343 (72%), Gaps = 4/343 (1%)
Query: 5 EAMTFNIHGGYLEAIVRGYRAGLLTAADYNNLCQCETLDDIKMHLSATEYGPYLQNEPSP 64
+A++FN + GY+EA+VRGY + LL Y+NL QCE+L+D ++ LS+T+YG +L N+ S
Sbjct: 2 DALSFNTNSGYIEALVRGYESALLEQHIYSNLSQCESLEDFRLQLSSTDYGGFLANQ-SK 60
Query: 65 LHTTTIVEKCTLKLVDEYKHMLCQATEPLSTFLEYITYGHMIDNVVLIVTGTLHERDVQE 124
L ++ I K T KL+DE+ + QA E LS F++YITY +MIDN++L++TGT++ +D +
Sbjct: 61 LTSSIISAKATEKLLDEFDLIRRQADETLSKFMDYITYAYMIDNIMLLLTGTVNGQDTHD 120
Query: 125 LLEKCHPLGMFDSIATLAVAQNMRELYRLVLVDTPLAPYFSECITSEDLDDMNIEIMRNT 184
LLE+CHPLG F+++ L VA N+ ELY +VL++TPLAPYF +C++++DLD+ +IEI+RNT
Sbjct: 121 LLERCHPLGWFETLPALCVATNVEELYSVVLIETPLAPYFKDCLSADDLDEQHIEIIRNT 180
Query: 185 LYKAYLEDFYKFCQKLGGATAEIMSDLLAFEADRRAVNITINSIGTELTRDDRRKLYSNF 244
LYKAYLEDFY FC+K+G TA+ M +L FEADRRA+ ITINS GTEL++++R K+Y +F
Sbjct: 181 LYKAYLEDFYNFCKKIGACTADTMLPILEFEADRRAITITINSFGTELSKEERAKMYPSF 240
Query: 245 GLLYPYGHEELAVCEDIDQVRGVMEKYPPYQSIFSKLSYGESQMLDKAFYEEEVKRLCLA 304
G LYP+ LA E+ V Y F + S + LD F E+EV+ LA
Sbjct: 241 GRLYPFSTSILARAENAGDVENACSLVKEYSDFFDQNS---QKSLDDHFNEKEVELNKLA 297
Query: 305 FEQQFHYGVFFAYMRLREQEIRNLMWISECVAQNQKSRVHDSV 347
F QQFHYG+ +A+++LREQEIRNL WI+EC++QNQ+ R + V
Sbjct: 298 FLQQFHYGIVYAFLKLREQEIRNLTWIAECISQNQRDRALNIV 340
>sp|P53659|VA0D_NEUCR V-type proton ATPase subunit d OS=Neurospora crassa (strain ATCC
24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987)
GN=vma-6 PE=3 SV=1
Length = 364
Score = 364 bits (935), Expect = e-100, Method: Compositional matrix adjust.
Identities = 174/361 (48%), Positives = 247/361 (68%), Gaps = 19/361 (5%)
Query: 5 EAMTFNIHGGYLEAIVRGYRAGLLTAADYNNLCQCETLDDIKMHLSATEYGPYLQNEPSP 64
E + FN++ GY+E IVRGYR LLT+ +Y N+ QCE++DD+K+ L YG +L + P
Sbjct: 2 EGLLFNVNNGYIEGIVRGYRNSLLTSTNYTNMTQCESIDDLKLQLGPA-YGDFLASLPPK 60
Query: 65 LHTTTIVEKCTLKLVDEYKHMLCQATEPLSTFLEYITYGHMIDNVVLIVTGTLHERDVQE 124
T+ + K T KLV E++++ A L+ F++Y+TYG+MIDNV L++TGTLHERD +E
Sbjct: 61 PSTSALAAKTTDKLVSEFRYVRANAAGSLAKFMDYLTYGYMIDNVALLITGTLHERDTRE 120
Query: 125 LLEKCHPLGMFDSIATLAVAQNMRELYRLVLVDTPLAPYFSECITSEDLDDMNIEIMRNT 184
LLE+CHPLG F+++ L VA N+ ELY V+++TPLAPYF ++ +DLD++NIEI+RNT
Sbjct: 121 LLERCHPLGWFETMPVLCVATNIEELYNSVMIETPLAPYFKSSLSLQDLDELNIEIVRNT 180
Query: 185 LYKAYLEDFYKFCQK----LGGATAEIMSDLLAFEADRRAVNITINSIGTELTRDDRRKL 240
LYK YLEDFY F G TAE+MS+LL FEADRRA+NIT+NS GTEL++ DR+KL
Sbjct: 181 LYKNYLEDFYHFVNTHPDMAGTPTAEVMSELLEFEADRRAINITLNSFGTELSKADRKKL 240
Query: 241 YSNFGLLYPYGHEELAVCEDIDQVRGVMEKYPPYQSIFSK--------------LSYGES 286
Y NFG LYP G L+ +D + VR +E Y+S F E
Sbjct: 241 YPNFGQLYPEGTLMLSRADDFEGVRLAVEGVADYKSFFDAAGLGGGPSGPGNMGGGGTEG 300
Query: 287 QMLDKAFYEEEVKRLCLAFEQQFHYGVFFAYMRLREQEIRNLMWISECVAQNQKSRVHDS 346
+ L+ FY++E++ +AF +QF Y + +A+++LREQEIRN+ WI+EC+AQNQK R+++
Sbjct: 301 KSLEDMFYQKEMEISKMAFTRQFTYAIVYAWVKLREQEIRNITWIAECIAQNQKERINNY 360
Query: 347 V 347
+
Sbjct: 361 I 361
>sp|Q8N8Y2|VA0D2_HUMAN V-type proton ATPase subunit d 2 OS=Homo sapiens GN=ATP6V0D2 PE=2
SV=1
Length = 350
Score = 355 bits (912), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 162/339 (47%), Positives = 237/339 (69%)
Query: 9 FNIHGGYLEAIVRGYRAGLLTAADYNNLCQCETLDDIKMHLSATEYGPYLQNEPSPLHTT 68
FN+ GYLE +VRG +A LLT DY NL QCETL+D+K+HL T+YG +L N +PL +
Sbjct: 9 FNVDHGYLEGLVRGCKASLLTQQDYINLVQCETLEDLKIHLQTTDYGNFLANHTNPLTVS 68
Query: 69 TIVEKCTLKLVDEYKHMLCQATEPLSTFLEYITYGHMIDNVVLIVTGTLHERDVQELLEK 128
I + +L E+++ + EPLSTFL Y+T +MIDNV+L++ G L ++ V+E+L K
Sbjct: 69 KIDTEMRKRLCGEFEYFRNHSLEPLSTFLTYMTCSYMIDNVILLMNGALQKKSVKEILGK 128
Query: 129 CHPLGMFDSIATLAVAQNMRELYRLVLVDTPLAPYFSECITSEDLDDMNIEIMRNTLYKA 188
CHPLG F + + +A+ +L+ +L++TPLAP+F +C++ LD++NIE++RN LYK+
Sbjct: 129 CHPLGRFTEMEAVNIAETPSDLFNAILIETPLAPFFQDCMSENALDELNIELLRNKLYKS 188
Query: 189 YLEDFYKFCQKLGGATAEIMSDLLAFEADRRAVNITINSIGTELTRDDRRKLYSNFGLLY 248
YLE FYKFC+ G TAE+M +L FEADRRA IT+NS GTEL+++DR LY FG LY
Sbjct: 189 YLEAFYKFCKNHGDVTAEVMCPILEFEADRRAFIITLNSFGTELSKEDRETLYPTFGKLY 248
Query: 249 PYGHEELAVCEDIDQVRGVMEKYPPYQSIFSKLSYGESQMLDKAFYEEEVKRLCLAFEQQ 308
P G LA ED DQ++ V + Y Y+ +F + + L+ FYE EV+ LAF +Q
Sbjct: 249 PEGLRLLAQAEDFDQMKNVADHYGVYKPLFEAVGGSGGKTLEDVFYEREVQMNVLAFNRQ 308
Query: 309 FHYGVFFAYMRLREQEIRNLMWISECVAQNQKSRVHDSV 347
FHYGVF+AY++L+EQEIRN++WI+EC++Q +++++ +
Sbjct: 309 FHYGVFYAYVKLKEQEIRNIVWIAECISQRHRTKINSYI 347
>sp|Q5R7B7|VA0D2_PONAB V-type proton ATPase subunit d 2 OS=Pongo abelii GN=ATP6V0D2 PE=2
SV=2
Length = 350
Score = 351 bits (901), Expect = 4e-96, Method: Compositional matrix adjust.
Identities = 160/339 (47%), Positives = 236/339 (69%)
Query: 9 FNIHGGYLEAIVRGYRAGLLTAADYNNLCQCETLDDIKMHLSATEYGPYLQNEPSPLHTT 68
FN+ GYLE +VRG +A LLT DY NL QCETL+D+K+HL T+YG +L N+ +PL +
Sbjct: 9 FNVDHGYLEGLVRGCKASLLTQQDYINLVQCETLEDLKIHLQTTDYGNFLANQTNPLTVS 68
Query: 69 TIVEKCTLKLVDEYKHMLCQATEPLSTFLEYITYGHMIDNVVLIVTGTLHERDVQELLEK 128
I + +L E+++ + EPLSTFL Y+T +MIDNV+ ++ G L ++ V+E+L K
Sbjct: 69 KIDTEMRKRLCGEFEYFRNHSLEPLSTFLTYMTCSYMIDNVIPLMNGALQKKSVKEILGK 128
Query: 129 CHPLGMFDSIATLAVAQNMRELYRLVLVDTPLAPYFSECITSEDLDDMNIEIMRNTLYKA 188
CHPLG F + + +A+ +L+ +L++TPLAP+F +C++ L+++NIE++RN LYK+
Sbjct: 129 CHPLGRFTEMEAVNIAETPSDLFNAILIETPLAPFFQDCMSENALNELNIELLRNKLYKS 188
Query: 189 YLEDFYKFCQKLGGATAEIMSDLLAFEADRRAVNITINSIGTELTRDDRRKLYSNFGLLY 248
YLE FYKFC+ G TAE+M +L FEADRRA IT+NS GTEL+++DR LY FG LY
Sbjct: 189 YLEAFYKFCKNHGDVTAEVMCPILEFEADRRAFIITLNSFGTELSKEDRETLYPTFGKLY 248
Query: 249 PYGHEELAVCEDIDQVRGVMEKYPPYQSIFSKLSYGESQMLDKAFYEEEVKRLCLAFEQQ 308
P G LA ED DQ++ V + Y Y+ +F + + L+ FYE EV+ LAF +Q
Sbjct: 249 PEGLRLLAQAEDFDQMKNVADHYGVYKPLFEAVGGSGGKTLEDVFYEREVQMNVLAFNRQ 308
Query: 309 FHYGVFFAYMRLREQEIRNLMWISECVAQNQKSRVHDSV 347
FHYGVF+AY++L+EQEIRN+ WI+EC++Q +++++ +
Sbjct: 309 FHYGVFYAYVKLKEQEIRNIAWIAECISQRHRTKINSYI 347
>sp|Q80SY3|VA0D2_MOUSE V-type proton ATPase subunit d 2 OS=Mus musculus GN=Atp6v0d2 PE=2
SV=2
Length = 350
Score = 350 bits (899), Expect = 6e-96, Method: Compositional matrix adjust.
Identities = 160/339 (47%), Positives = 238/339 (70%)
Query: 9 FNIHGGYLEAIVRGYRAGLLTAADYNNLCQCETLDDIKMHLSATEYGPYLQNEPSPLHTT 68
FN+ GYLE +VRG +A LLT DY NL QCETL+D+K+HL T+YG +L NE +PL +
Sbjct: 9 FNVDHGYLEGLVRGCKASLLTQQDYVNLVQCETLEDLKIHLQTTDYGNFLANETNPLTVS 68
Query: 69 TIVEKCTLKLVDEYKHMLCQATEPLSTFLEYITYGHMIDNVVLIVTGTLHERDVQELLEK 128
I + KL E+ + + EPLSTFL Y+T +MIDN++L++ G L ++ V+E+L K
Sbjct: 69 KIDTEMRKKLCREFDYFRNHSLEPLSTFLTYMTCSYMIDNIILLMNGALQKKSVKEVLAK 128
Query: 129 CHPLGMFDSIATLAVAQNMRELYRLVLVDTPLAPYFSECITSEDLDDMNIEIMRNTLYKA 188
CHPLG F + + +A+ +L++ VLV+TPLAP+F +C++ LD++NIE++RN LYK+
Sbjct: 129 CHPLGRFTEMEAVNIAETPSDLFKAVLVETPLAPFFQDCMSENTLDELNIELLRNKLYKS 188
Query: 189 YLEDFYKFCQKLGGATAEIMSDLLAFEADRRAVNITINSIGTELTRDDRRKLYSNFGLLY 248
YLE FYKFC+ G TA++M +L FEADRRA+ IT+NS GTEL+++DR L+ G LY
Sbjct: 189 YLEAFYKFCKDHGDVTADVMCPILEFEADRRALIITLNSFGTELSKEDRETLFPTCGRLY 248
Query: 249 PYGHEELAVCEDIDQVRGVMEKYPPYQSIFSKLSYGESQMLDKAFYEEEVKRLCLAFEQQ 308
P G LA ED +Q++ V + Y Y+ +F + + L+ FYE EV+ LAF +Q
Sbjct: 249 PEGLRLLAQAEDFEQMKRVADNYGVYKPLFDAVGGSGGKTLEDVFYEREVQMNVLAFNRQ 308
Query: 309 FHYGVFFAYMRLREQEIRNLMWISECVAQNQKSRVHDSV 347
FHYGVF+AY++L+EQE+RN++WI+EC++Q +++++ +
Sbjct: 309 FHYGVFYAYVKLKEQEMRNIVWIAECISQRHRTKINSYI 347
>sp|Q5FVL0|VA0D2_RAT V-type proton ATPase subunit d 2 OS=Rattus norvegicus GN=Atp6v0d2
PE=2 SV=1
Length = 350
Score = 348 bits (893), Expect = 3e-95, Method: Compositional matrix adjust.
Identities = 159/339 (46%), Positives = 237/339 (69%)
Query: 9 FNIHGGYLEAIVRGYRAGLLTAADYNNLCQCETLDDIKMHLSATEYGPYLQNEPSPLHTT 68
FN+ GYLE +VRG +A LLT DY NL QCETL+D+K+HL T+YG +L +E +PL +
Sbjct: 9 FNVDHGYLEGLVRGCKASLLTQQDYVNLVQCETLEDLKIHLQTTDYGNFLAHETNPLTVS 68
Query: 69 TIVEKCTLKLVDEYKHMLCQATEPLSTFLEYITYGHMIDNVVLIVTGTLHERDVQELLEK 128
I + KL E+ + + EPLSTF Y+T +MIDN++L++ G L ++ V+E+L K
Sbjct: 69 KIDTEMRKKLCREFDYFRNHSLEPLSTFFTYMTCSYMIDNIILLMNGALQKKSVKEVLAK 128
Query: 129 CHPLGMFDSIATLAVAQNMRELYRLVLVDTPLAPYFSECITSEDLDDMNIEIMRNTLYKA 188
CHPLG F + + +A++ EL++ VLV+TPLAP+F +C++ LD++NIE++RN LYK+
Sbjct: 129 CHPLGRFTEMEAVNIAESASELFKAVLVETPLAPFFQDCMSENTLDELNIELLRNKLYKS 188
Query: 189 YLEDFYKFCQKLGGATAEIMSDLLAFEADRRAVNITINSIGTELTRDDRRKLYSNFGLLY 248
YLE FYKFC+ G TAE+M +L FEADRRA+ IT+NS GTEL+++DR L+ G LY
Sbjct: 189 YLEAFYKFCKDHGDVTAEVMCPILEFEADRRALIITLNSFGTELSKEDRETLFPTCGKLY 248
Query: 249 PYGHEELAVCEDIDQVRGVMEKYPPYQSIFSKLSYGESQMLDKAFYEEEVKRLCLAFEQQ 308
P G LA ED + ++ V + Y Y+ +F + + L+ FYE EV+ LAF +Q
Sbjct: 249 PEGLRLLAQAEDFEHMKRVADNYGVYKPLFDAVGGSGGKTLEDVFYEREVQMNVLAFNRQ 308
Query: 309 FHYGVFFAYMRLREQEIRNLMWISECVAQNQKSRVHDSV 347
FHYGVF+AY++L+EQE+RN++WI+EC++Q +++++ +
Sbjct: 309 FHYGVFYAYVKLKEQEMRNIVWIAECISQRHRTKINSYI 347
>sp|Q2KJB6|VA0D2_BOVIN V-type proton ATPase subunit d 2 OS=Bos taurus GN=ATP6V0D2 PE=2
SV=1
Length = 351
Score = 343 bits (881), Expect = 9e-94, Method: Compositional matrix adjust.
Identities = 160/342 (46%), Positives = 235/342 (68%), Gaps = 1/342 (0%)
Query: 7 MTFNIHGGYLEAIVRGYRAGLLTAADYNNLCQCETLDDIKMHLSATEYGPYLQNEPSPLH 66
+ FN GYLE +VRG +AGLLT DY NL QCE L+D+K+HL T+YG +L N+ +PL
Sbjct: 7 LNFNADHGYLEGLVRGCKAGLLTRRDYVNLVQCENLEDLKIHLQTTDYGNFLANQATPLT 66
Query: 67 TTTIVEKCTLKLVDEYKHMLCQATEPLSTFLEYITYGHMIDNVVLIVTGTLHERDVQELL 126
+ I + KL E+++ + EPLSTF Y+T +MIDNV+L++ G L + V+++L
Sbjct: 67 VSVIDTEMRKKLCREFEYFRNHSLEPLSTFFTYMTCSYMIDNVILLMNGALQNKPVKDVL 126
Query: 127 EKCHPLGMFDSIATLAVAQNMRELYRLVLVDTPLAPYFSECITSEDLDDMNIEIMRNTLY 186
KCHPLG F + + +A+ +L+ +LV+TPLAP+F +C + LD++NIEI+RN LY
Sbjct: 127 VKCHPLGHFTEMEAVNIAETPSDLFNAILVETPLAPFFQDCTSENALDELNIEILRNKLY 186
Query: 187 KAYLEDFYKFCQKLGGATAEIMSDLLAFEADRRAVNITINSIGTELTRDDRRKLYSNFGL 246
K+Y+E FYKFC+ G TAE+M +L FEADRRA IT+NS GTEL+++DR LY G
Sbjct: 187 KSYIEAFYKFCKNHGDVTAEVMCPILEFEADRRAFIITLNSFGTELSKEDRETLYPTCGK 246
Query: 247 LYPYGHEELAVCEDIDQVRGVMEKYPPYQSIFSKLSYGE-SQMLDKAFYEEEVKRLCLAF 305
L+P G LA ED +Q++ V + Y Y+ +F +S + L+ FYE EV+ LAF
Sbjct: 247 LHPEGLRLLAQAEDFEQMKRVADSYGVYKPLFEAVSDSSGGKTLEDVFYEREVQMNVLAF 306
Query: 306 EQQFHYGVFFAYMRLREQEIRNLMWISECVAQNQKSRVHDSV 347
+QFHYGVF+AY +L+EQE+RN++WI+EC++Q Q+++++ +
Sbjct: 307 NRQFHYGVFYAYTKLKEQEMRNIVWIAECISQRQRTKINSYI 348
>sp|P32366|VA0D_YEAST V-type proton ATPase subunit d OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=VMA6 PE=1 SV=2
Length = 345
Score = 317 bits (811), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 157/347 (45%), Positives = 232/347 (66%), Gaps = 10/347 (2%)
Query: 5 EAMTFNIHGGYLEAIVRGYRAGLLTAADYNNLCQCETLDDIKMHLSATEYGPYLQNEPSP 64
E + FNI G++E +VRGYR GLL+ Y NL QC+TL+D+K+ LS+T+YG +L + S
Sbjct: 2 EGVYFNIDNGFIEGVVRGYRNGLLSNNQYINLTQCDTLEDLKLQLSSTDYGNFLSSVSSE 61
Query: 65 LHTTTIVEK-CTLKLVDEYKHMLCQATEPLSTFLEYITYGHMIDNVVLIVTGTLHERDVQ 123
TT+++++ + KL E+ ++ Q++ F++YITYG+MIDNV L++TGT+H+RD
Sbjct: 62 SLTTSLIQEYASSKLYHEFNYIRDQSSGSTRKFMDYITYGYMIDNVALMITGTIHDRDKG 121
Query: 124 ELLEKCHPLGMFDSIATLAVAQNMRELYRLVLVDTPLAPYFSECI-TSEDLDDMNIEIMR 182
E+L++CHPLG FD++ TL+VA ++ LY VLVDTPLAPYF C T+E+LDDMNIEI+R
Sbjct: 122 EILQRCHPLGWFDTLPTLSVATDLESLYETVLVDTPLAPYFKNCFDTAEELDDMNIEIIR 181
Query: 183 NTLYKAYLEDFYKFC-QKLGGATAEIMSDLLAFEADRRAVNITINSI-GTELTRDDRRKL 240
N LYKAYLEDFY F +++ E M LL FEADRR++NI +NS+ +++ D + L
Sbjct: 182 NKLYKAYLEDFYNFVTEEIPEPAKECMQTLLGFEADRRSINIALNSLQSSDIDPDLKSDL 241
Query: 241 YSNFGLLYPYGHEELAVCEDIDQVRGVMEKYPPYQSIFSKLSYGESQMLDKAFYEEEVKR 300
N G LYP LA +D + VR + Y+ E+ L+ FY+ E++
Sbjct: 242 LPNIGKLYPLATFHLAQAQDFEGVRAALANVYEYRGFL------ETGNLEDHFYQLEMEL 295
Query: 301 LCLAFEQQFHYGVFFAYMRLREQEIRNLMWISECVAQNQKSRVHDSV 347
AF QQF +A+M+ +EQE+RN+ WI+EC+AQNQ+ R+++ +
Sbjct: 296 CRDAFTQQFAISTVWAWMKSKEQEVRNITWIAECIAQNQRERINNYI 342
>sp|Q9VCQ3|VA0D2_DROME Probable V-type proton ATPase subunit d 2 OS=Drosophila
melanogaster GN=VhaAC39-2 PE=2 SV=1
Length = 350
Score = 284 bits (727), Expect = 6e-76, Method: Compositional matrix adjust.
Identities = 135/342 (39%), Positives = 215/342 (62%), Gaps = 4/342 (1%)
Query: 6 AMTFNIHGGYLEAIVRGYRAGLLTAADYNNLCQCETLDDIKMHLSATEYGPYLQNEPSPL 65
+M FN GYLEA+ RG++ G+L +DY NL QCE+L+D+ + + T+YG E S
Sbjct: 2 SMIFNTEYGYLEALTRGFKNGMLKHSDYLNLTQCESLEDVMISIQGTDYGLIFGGEQSA- 60
Query: 66 HTTTIVEKCTL-KLVDEYKHMLCQATEPLSTFLEYITYGHMIDNVVLIVTGTLHERDVQE 124
+ ++E+C +L+ +Y ++ +TEPL+TF+E+I Y MIDNV L+V G + R ++
Sbjct: 61 PSVEVIERCLRDRLLQQYYYIRSHSTEPLTTFMEFIRYPFMIDNVALLVAGLNNHRSMKR 120
Query: 125 LLEKCHPLGMFDSIATLAVAQNMRELYRLVLVDTPLAPYFSECITSEDLDDMNIEIMRNT 184
LL CHPLG FD + + VA N EL+ VL+DTP+A + + E L +++EI+R
Sbjct: 121 LLRMCHPLGEFDQLGAIEVASNSAELFDAVLIDTPIARFVPRDLPMESLRYLDVEIVRAH 180
Query: 185 LYKAYLEDFYKFCQKLGGATAEIMSDLLAFEADRRAVNITINSIGTELTRDDRRKLYSNF 244
LY+AYLE FY +C +LGG TA +M++LL+FEADRR + I +N+IG+++ +R K++
Sbjct: 181 LYRAYLEKFYAYCSQLGGNTANVMTNLLSFEADRRTITIAVNAIGSDIIPKERLKMFPTC 240
Query: 245 GLLYPYGHEELAVCEDIDQVRGVMEKYPPYQSIFSKLSYGESQM--LDKAFYEEEVKRLC 302
G L ++ D D++R V + Y +F L M L+ F E K+
Sbjct: 241 GYLPKIALASMSTLNDTDKIRDVCNVFDGYGKMFDNLERDSDGMITLEDRFLMMEAKKNV 300
Query: 303 LAFEQQFHYGVFFAYMRLREQEIRNLMWISECVAQNQKSRVH 344
F QQ+H+G+F+++++L++ E+RN++WISEC+AQ Q R++
Sbjct: 301 QTFLQQYHFGIFYSFIKLKQLEVRNIVWISECIAQRQTDRIN 342
>sp|O57726|VATC_PYRHO V-type ATP synthase subunit C OS=Pyrococcus horikoshii (strain ATCC
700860 / DSM 12428 / JCM 9974 / NBRC 100139 / OT-3)
GN=atpC PE=3 SV=1
Length = 370
Score = 51.6 bits (122), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 71/334 (21%), Positives = 136/334 (40%), Gaps = 18/334 (5%)
Query: 14 GYLEAIVRGYRAGLLTAADYNNLCQCETLDDIKMHLSATEYGPYLQNEPSPLHTTTIVEK 73
Y A +R A LLT ++ L + +TL + + L T+Y P L + S + I
Sbjct: 36 SYPNARIRAMEARLLTDQRFSELAESKTLQNFVVSLEDTDYSPRLASLQS-YNLYEIERA 94
Query: 74 CTLKLVDEYKHMLCQATEPLSTFLEYITYGHMIDNVVLIVTGTLHERDVQELLEKCHPLG 133
L LVD + M+ + + E + + N+ ++ L Q+ + P G
Sbjct: 95 LDLSLVDLVELMIKIMPKRIRGLFEILLEEWDVRNITNVIKAKLSNLPPQDFI---IPAG 151
Query: 134 -MFDSIATLAVAQNMRELYRLVLVDTPLAPYFSECITSEDLDDMNIEIMRNTLYKAYLED 192
MF + + ++ M E+ LV+++ + E + L +++++ LYK Y
Sbjct: 152 RMFPKVKAMVESKTMEEI--LVILE---GTEYEEPLRKLLLKEIDLQAFELELYKIYYSK 206
Query: 193 FYKFCQKLGGATAEIMSDLLAFEADRRAVNITINSIGTELTRDDRRKLYSNFGLLYPYGH 252
K+ G I + + D R ++I + + + + ++ + L G+L
Sbjct: 207 LLKYASSRKGEEKLISEEFIKMLIDYRNISIILRAKLSGMPSEEIKSLLIPGGMLSRAVL 266
Query: 253 EELAVCEDIDQVRGVMEKYPPYQSIFSKLSYGESQMLDKAFYEEEVKRLCLAFEQ---QF 309
E + ED+ G +E ++ E +DK EE ++R L + QF
Sbjct: 267 ESMLSSEDVMMALGELEGTRYGDALKDVREAVEGGRIDKV--EEALRRYILNRMKELSQF 324
Query: 310 H---YGVFFAYMRLREQEIRNLMWISECVAQNQK 340
+ V Y+ RE E+R L +++ + K
Sbjct: 325 YPLSVAVALTYLLERESEVRKLKAVAKLIEDKAK 358
>sp|Q9UXU5|VATC_PYRAB V-type ATP synthase subunit C OS=Pyrococcus abyssi (strain GE5 /
Orsay) GN=atpC PE=3 SV=1
Length = 370
Score = 50.4 bits (119), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 72/333 (21%), Positives = 141/333 (42%), Gaps = 16/333 (4%)
Query: 14 GYLEAIVRGYRAGLLTAADYNNLCQCETLDDIKMHLSATEYGPYLQNEPSPLHTTTIVEK 73
Y A +R A LLT ++ L + ++L + + L T+YG L + S + VE+
Sbjct: 36 SYPNARIRAMEARLLTDQRFSELAESKSLQNFVVSLEDTDYGKRLTSLQS--YNIEDVER 93
Query: 74 CT-LKLVDEYKHMLCQATEPLSTFLEYITYGHMIDNVVLIVTGTLHERDVQELLEKCHPL 132
L LVD + M+ + + E + + N++ +V L Q+ + P
Sbjct: 94 ALDLSLVDVIELMVKIMPKRIKGLFEIMLEEWDVRNIINVVKAKLSNMPPQDFI---MPA 150
Query: 133 G-MFDSIATLAVAQNMRELYRLVLVDTPLAPYFSECITSEDLDDMNIEIMRNTLYKAYLE 191
G M + +A A+ M E+ LV+++ + E + L+++ ++ LYK +
Sbjct: 151 GKMLQKVKAMAEAKTMEEM--LVILE---GTDYEEPLRRLLLNEITLQEFELELYKVHYS 205
Query: 192 DFYKFCQKLGGATAEIMSDLLAFEADRRAVNITINSIGTELTRDDRRKLYSNFGLLYPYG 251
++ G I S+ + D ++ + + + L ++D RKL G L
Sbjct: 206 KLLRYVNSRKGEEKIIASEFVNMLIDYTNISTLLRAKLSSLAQEDIRKLIIPGGTLSKST 265
Query: 252 HEELAVCEDIDQVRGVME--KYPPY-QSIFSKLSYGESQMLDKAFYEEEVKRLC-LAFEQ 307
E + ED+ G +E KY + + + G + ++ A + ++R+ L+
Sbjct: 266 IEAMINSEDVVMALGELEGTKYGEVLREVREAVESGNIESVEIALRKYILRRMKELSQFY 325
Query: 308 QFHYGVFFAYMRLREQEIRNLMWISECVAQNQK 340
V AY+ +E E+R L I++ + K
Sbjct: 326 PLSVAVAVAYLLQKESEVRKLKAIAKLIEDGVK 358
>sp|Q5JDR9|VATC_PYRKO V-type ATP synthase subunit C OS=Pyrococcus kodakaraensis (strain
ATCC BAA-918 / JCM 12380 / KOD1) GN=atpC PE=3 SV=1
Length = 365
Score = 43.1 bits (100), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 62/324 (19%), Positives = 129/324 (39%), Gaps = 26/324 (8%)
Query: 14 GYLEAIVRGYRAGLLTAADYNNLCQCETLDDIKMHLSATEYGPYLQNEPSPLHTTTIVEK 73
Y A VR A LLT +N L + TL + L T+Y L N S ++ +E+
Sbjct: 35 SYPNARVRAMEAKLLTEQRFNELAESRTLQNFVASLEDTDYKETLSNVSS--YSVEEIER 92
Query: 74 C-TLKLVDEYKHMLCQATEPLSTFLEYITYGHMIDNVVLIVTGTLHERDVQELLEKCHPL 132
L Y+ M + F + + N+ +V L + + + P
Sbjct: 93 ALDASLAKTYELMFKILPKRSRDFFRLMMEEWDVRNIANVVKAKLANEPASDYIIELGP- 151
Query: 133 GMFDSIATLAVAQNMRELYRLVLVDTPLAPYFSECITSEDLDDMNIEIMRNTLYKAYLED 192
M + +A A+ + E+ ++L TP + E I ++++ LY+ Y +
Sbjct: 152 -MLPKVKAMAEAKTLEEIL-VILEGTPYEGPYQELIAG----NIDVSTFETELYRMYYKK 205
Query: 193 FYKFCQKLGGATAEIMSDLLAFEADRRAVNITINSIGTELTRDDRRKLYSNFGLLYPYGH 252
+ + ++++ + + D+ + T+ L+ + R +L P G
Sbjct: 206 LLNYARSRKDDEKTLLTEFIKLKIDKLNLMTTLRGKLAGLSAKEIR------SMLIPGGS 259
Query: 253 EELAVCEDIDQVRGVMEK-----YPPYQSIFSKLSYGESQMLDKAFYEEEVKRLCLAFEQ 307
++ ID + + + Y + + + + ++++AF E +K++ F+
Sbjct: 260 LDVEPLLHIDSIEMTLAQLDSTEYGEFIRKVREEAEKDISVIERAFDEHLIKKVT-EFD- 317
Query: 308 QFH---YGVFFAYMRLREQEIRNL 328
+FH AY+ +E+E+R L
Sbjct: 318 RFHPLSIAAPLAYVLKKEREVRKL 341
>sp|O06502|VATC_DESSY V-type ATP synthase subunit C OS=Desulfurococcus sp. (strain SY)
GN=atpC PE=3 SV=1
Length = 364
Score = 38.9 bits (89), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 37/159 (23%), Positives = 67/159 (42%), Gaps = 6/159 (3%)
Query: 14 GYLEAIVRGYRAGLLTAADYNNLCQCETLDDIKMHLSATEYGPYLQNEPSPLHTTTIVEK 73
Y A ++ A LLT +N L + TL + ++L T+Y YL + S +T VEK
Sbjct: 34 SYPNARIKAMEAKLLTEQKFNELAESRTLQNFVVNLEDTDYKDYLADVSS--YTVEEVEK 91
Query: 74 CTLK-LVDEYKHMLCQATEPLSTFLEYITYGHMIDNVVLIVTGTLHERDVQELLEKCHPL 132
+ L Y+ M + F E + G + N+ +V L + + +
Sbjct: 92 ALERALAGTYELMFKILPKRSKGFFELLLEGWDVRNIANVVKAKLANEPASDYVVELG-- 149
Query: 133 GMFDSIATLAVAQNMRELYRLVLVDTPLAPYFSECITSE 171
M + +A A+ + E+ ++L TP + + + E
Sbjct: 150 TMLPKVKAMAEAKTLEEIL-VILEGTPYEEVYQKLLLGE 187
>sp|C5A334|VATC_THEGJ V-type ATP synthase subunit C OS=Thermococcus gammatolerans (strain
DSM 15229 / JCM 11827 / EJ3) GN=atpC PE=3 SV=1
Length = 366
Score = 32.0 bits (71), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 41/179 (22%), Positives = 71/179 (39%), Gaps = 15/179 (8%)
Query: 14 GYLEAIVRGYRAGLLTAADYNNLCQCETLDDIKMHLSATEYGPYLQN-EPSPLHTTTIVE 72
Y A + A LLT +N L + TL + ++L T+Y +L PL E
Sbjct: 36 SYPNARINAMEAKLLTGQRFNELAESRTLQNFIVNLEDTDYKVHLSGVTEDPLEIERAFE 95
Query: 73 KCTLKLVDEYKHMLCQATEPLSTFLEYITYGHMIDNVVLIVTGTLHERDVQELLEKCHPL 132
+ L Y M + +S F + + N+ +V + + ++ +
Sbjct: 96 RA---LASTYLLMEEILPKRVSGFFRLLLEEWDVRNIASVVKAKVRG---EPAIDYVVEI 149
Query: 133 G-MFDSIATLAVAQNMRELYRLVLVDTPLAPYFSECITSE-DLDDMNIEIMRNTLYKAY 189
G M + +A A+ M E+ ++L TP ++ + E D+D E LYK Y
Sbjct: 150 GTMVPKVKAIAEAKTMEEIL-VILEGTPYEEHYQRLLLGEIDVDQFETE-----LYKVY 202
>sp|A5UMW0|RADA_METS3 DNA repair and recombination protein RadA OS=Methanobrevibacter
smithii (strain PS / ATCC 35061 / DSM 861) GN=radA PE=3
SV=1
Length = 311
Score = 32.0 bits (71), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 34/61 (55%), Gaps = 6/61 (9%)
Query: 119 ERDVQELLEKCHPLGMFDSIATLAVAQNMREL------YRLVLVDTPLAPYFSECITSED 172
E D+ E+L+K H F+S + +A+ + EL +LV+VD+ +A + +E + E
Sbjct: 156 ELDIDEVLQKIHVARAFNSSHQILMAEKINELIQQGNNIKLVIVDSLMAHFRAEYVGRES 215
Query: 173 L 173
L
Sbjct: 216 L 216
>sp|Q57672|VATC_METJA V-type ATP synthase subunit C OS=Methanocaldococcus jannaschii
(strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC
100440) GN=atpC PE=3 SV=2
Length = 381
Score = 32.0 bits (71), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 75/344 (21%), Positives = 128/344 (37%), Gaps = 28/344 (8%)
Query: 14 GYLEAIVRGYRAGLLTAADYNNLCQCETLDDIKMHLSATEYGPYLQNEPSPLHTTTIVEK 73
Y+ A +R A L A N L + +L+++ L T+YG Y+ + L VEK
Sbjct: 38 AYVNARIRSKEAKLFDDAKLNELIESGSLEELVGLLEDTDYGQYVIEVMNELKDPVAVEK 97
Query: 74 C-TLKLVDEYKHMLCQATEPLSTFLEYITYGHMIDNVVLIVTGTLHERDVQELLEKCHPL 132
+ L D Y + + + L+ I N+ ++ +E PL
Sbjct: 98 ALDMYLADLYGLIYRISPDSAKKVLKVFAKKFDIKNIKTLIRAKFVGLSAEETYALLIPL 157
Query: 133 GMF--DSIATLAVAQNMRELYRLVLVDTPLAPYFSECITSEDLDDMNIEIMRNTLYKAYL 190
G + + LA + + E+ R L T E +++ D NI L K YL
Sbjct: 158 GNIPVEKLKELAEVKTVEEVVR-GLDGTEYFKILQEELSNYD-QTSNIIGFELALDKYYL 215
Query: 191 EDFYKFCQKLGGATAEIMSDLLAFEADRRAVNITINSIGTELTRDDRRKLYSNFGL-LYP 249
E K G +I + + D + + + L+ ++ K + G L
Sbjct: 216 ESLRKTIMT-EGKEEDIFREFVGTIIDVENLKVILKGKADGLSAEELSKYVTLTGYELAD 274
Query: 250 YGHEELAVCEDIDQVRG-------------VMEKYPPYQSIFSKLSYGESQMLDKAFYEE 296
+ ++L I+ V ME+Y +SI Y + LDK E+
Sbjct: 275 WKLKDLMSAGGIEGVLSGLEGTSYAEVLAEAMEEYEKTKSI-----YAFEKALDKFVLEK 329
Query: 297 EVKRLCLAFEQQFHYGVFFAYMRLREQEIRNLMWISECVAQNQK 340
K L+ + F G + +E E++NL I + +N K
Sbjct: 330 GKK---LSTRKPFGVGPIIGLIVSKELEVKNLKAIIKGKIENLK 370
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.323 0.138 0.412
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 130,109,588
Number of Sequences: 539616
Number of extensions: 5291417
Number of successful extensions: 12645
Number of sequences better than 100.0: 32
Number of HSP's better than 100.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 10
Number of HSP's that attempted gapping in prelim test: 12597
Number of HSP's gapped (non-prelim): 32
length of query: 351
length of database: 191,569,459
effective HSP length: 118
effective length of query: 233
effective length of database: 127,894,771
effective search space: 29799481643
effective search space used: 29799481643
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 62 (28.5 bits)