Query 018709
Match_columns 351
No_of_seqs 134 out of 619
Neff 8.6
Searched_HMMs 29240
Date Mon Mar 25 04:51:30 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/018709.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/018709hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1v9m_A V-type ATP synthase sub 100.0 8.2E-58 2.8E-62 429.8 28.0 313 13-348 5-321 (323)
2 1v9m_A V-type ATP synthase sub 99.7 3.8E-16 1.3E-20 146.0 15.0 198 27-243 118-322 (323)
3 1w3w_A Annexin A8; coagulation 59.0 11 0.00039 34.2 5.1 47 189-236 257-305 (327)
4 1n00_A Annexin GH1; membrane-b 44.5 49 0.0017 29.7 6.9 45 191-236 253-298 (321)
5 1dm5_A Annexin XII E105K mutan 43.1 51 0.0017 29.6 6.8 46 189-235 248-294 (315)
6 1yii_A Annexin A5, annexin V, 23.4 2.3E+02 0.0079 25.2 7.7 48 188-236 248-297 (320)
7 1b0n_B Protein (SINI protein); 23.3 34 0.0012 22.4 1.4 27 216-242 11-37 (57)
8 2zhj_A Annexin A4; zynogen gra 19.3 4.3E+02 0.015 23.4 8.6 45 191-236 255-300 (322)
9 3bjv_A RMPA; alpha/beta three 19.1 36 0.0012 26.9 1.1 34 28-61 124-157 (161)
10 2oqt_A Hypothetical protein SP 15.8 40 0.0014 26.7 0.6 35 27-61 124-158 (162)
No 1
>1v9m_A V-type ATP synthase subunit C; VOV1-ATPase, V-type ATPase, the C subunit, thermus thermophi riken structural genomics/proteomics initiative; 1.85A {Thermus thermophilus} SCOP: f.40.1.1 PDB: 1r5z_A 3j0j_M*
Probab=100.00 E-value=8.2e-58 Score=429.81 Aligned_cols=313 Identities=17% Similarity=0.166 Sum_probs=283.2
Q ss_pred cchHHHHHHHHHhcCCCHHhHHHHHcCCChHHHHHhcCCCCChhhhcCCCCCCCHHHHHHHHHHHHHHHHHHHHHhcCCc
Q 018709 13 GGYLEAIVRGYRAGLLTAADYNNLCQCETLDDIKMHLSATEYGPYLQNEPSPLHTTTIVEKCTLKLVDEYKHMLCQATEP 92 (351)
Q Consensus 13 y~~~~arvra~~~~lL~~~~~~~L~~~~s~~e~~~~L~~T~Y~~~l~~~~~~~~~~~lE~~L~~~l~~~~~~l~~~~~~~ 92 (351)
|+|++||||||++++|++++|++|++ +|++|++.+|++|+|++.+.+++ ..++|.+|++++.++|+.+.+++|++
T Consensus 5 y~y~~arvR~~~~~lL~~~~~~~L~~-~sl~e~~~~L~~t~Y~~~l~~~~----~~~iE~~L~~~l~~~~~~l~~~~~~~ 79 (323)
T 1v9m_A 5 FAYLNARVRVRRGTLLKESFFQEALD-LSFADFLRLLSETVYGGELAGQG----LPDVDRAVLRTQAKLVGDLPRLVTGE 79 (323)
T ss_dssp CHHHHHHHHHHHTTSCCHHHHHHHTT-CCHHHHHHHHHTSGGGGGCCCSS----HHHHHHHHHHHHHHHTTTHHHHCCHH
T ss_pred chhHhHHHHHHHHhccCHHHHHHHHh-CCHHHHHHHHhcCchHHHHhhcC----HHHHHHHHHHHHHHHHHHHHHHCCcc
Confidence 99999999999999999999999999 99999999999999999987763 78999999999999999999999999
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhCCCChhHHhhhhccCCCCc--chhHHHhcCCHHHHHHHhhhCCCChhhhhhhhcc
Q 018709 93 LSTFLEYITYGHMIDNVVLIVTGTLHERDVQELLEKCHPLGMFD--SIATLAVAQNMRELYRLVLVDTPLAPYFSECITS 170 (351)
Q Consensus 93 ~~~~~~~~~~~~di~NlK~llr~~~~g~~~~~i~~~l~~~G~~~--~l~~L~~~~~~~el~~~l~~~t~y~~~l~~~~~~ 170 (351)
.+.|+++++.+||+||||+++|++..|++.+++. ++| |.++ .++.|+.++|++|+++.| .+|||+.++.++...
T Consensus 80 ~~~~~~~~~~~~di~Nik~ilr~~~~~~~~~~l~--~~~-g~~~~~~l~~l~~a~~~~el~~~L-~~t~y~~~l~~~~~~ 155 (323)
T 1v9m_A 80 AREAVRLLLLRNDLHNLQALLRAKATGRPFEEVL--LLP-GTLREEVWRQAYEAQDPAGMAQVL-AVPGHPLARALRAVL 155 (323)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHTCCGGGCC--CCS-CSSCHHHHHHHHHSSSHHHHHHHH-HTTTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcCCCccccc--cCC-CCCCHHHHHHHHhCCCHHHHHHHH-hccccchHHHHHHHH
Confidence 8999999999999999999999999999999875 799 9999 599999999999999999 999999999988766
Q ss_pred cccCCCCHHHHHHHHHHHHHHHHHHHHHhcCCccHHHHHHHHHHHHHHHHHHHHHHhcCCCCCHHhhhccccCCcc-cCh
Q 018709 171 EDLDDMNIEIMRNTLYKAYLEDFYKFCQKLGGATAEIMSDLLAFEADRRAVNITINSIGTELTRDDRRKLYSNFGL-LYP 249 (351)
Q Consensus 171 ~~~~~~~~~~~E~~LD~~y~~~l~~~~~~~~~~~~~~l~~~~~~~iD~~Ni~~i~R~k~~~~~~e~~~~~l~~~g~-l~~ 249 (351)
+ ++.+++.+|+.||++||+++++.++++++ +.+.++++.+||+.||+|++|+++++.+ +.++++|||+ |++
T Consensus 156 ~--~~~~~~~~e~~Ldk~y~~~~~~~~~~~~~---~~l~~~~~~~iD~~Ni~~~lr~~~~~~~---i~~~li~~G~~l~~ 227 (323)
T 1v9m_A 156 R--ETQDLARVEALLAKRFFEDVAKAAKGLDQ---PALRDYLALEVDAENLRTAFKLQGSGLA---PDAFFLKGGRFVDR 227 (323)
T ss_dssp T--TCCCHHHHHHHHHHHHHHHHHC----------CHHHHHHHHHHHHHHHHHHHHTTTSCCC---GGGTCCSSCSSCCH
T ss_pred H--HcCCcHHHHHHHHHHHHHHHHHHHhhcCh---HHHHHHHHHHHHHHHHHHHHHHHHcCCC---HHHhccCCCCccCH
Confidence 5 33499999999999999999999988765 6899999999999999999999999886 7889999997 999
Q ss_pred hhHHhcccCCCHHHHHHHhhcCcchhHhhhhhccCCcchHHHHHHHHHHHHHHHHhhcCCchHHHHHHHHHHHHHHHhHH
Q 018709 250 YGHEELAVCEDIDQVRGVMEKYPPYQSIFSKLSYGESQMLDKAFYEEEVKRLCLAFEQQFHYGVFFAYMRLREQEIRNLM 329 (351)
Q Consensus 250 ~~l~~l~~~~~~~~~~~~l~~t~~~~~l~~~~~~~~~~~lE~~~~~~~~~~~~~~~~~~~~~~~i~aYl~~ke~Ei~nLr 329 (351)
+.+.+++.+++ ++.+.+++|+|. .+++.. +...+|+.+++++++.++.++++|||++|++||+++||+||+|||
T Consensus 228 ~~l~~l~~~~~--~~~~~l~~t~Y~-~~~~~~---~~~~~E~~~~~~~~~~~~~~~~~~f~~~~~~ayl~~kE~Ei~nl~ 301 (323)
T 1v9m_A 228 VRFARLMEGDY--AVLDELSGTPFS-GLSGVR---DLKALERGLRCVLLKEAKKGVQDPLGVGLVLAYVKEREWEAVRLR 301 (323)
T ss_dssp HHHHHHHTTCG--GGGGSCTTSTTG-GGTTCC---SHHHHHHHHHHHHHHHHGGGGGCTTSHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhCcH--HHHHHHcCCCHH-HHhccC---CHHHHHHHHHHHHHHHHHHhCCCCCChHHHHHHHHHHHHHHHHHH
Confidence 99999998887 889999998864 444332 356899999999999998899999999999999999999999999
Q ss_pred HHHHHHhhchh-hhhccccc
Q 018709 330 WISECVAQNQK-SRVHDSVV 348 (351)
Q Consensus 330 ~I~eg~~~~~~-~~i~~~~~ 348 (351)
||++||++|++ ++|+++++
T Consensus 302 ~I~~~~~~~l~~e~i~~~l~ 321 (323)
T 1v9m_A 302 LLARRAYFGLPRAQVEEEVV 321 (323)
T ss_dssp HHHHHHHHTCCHHHHHHHSC
T ss_pred HHHHHHHcCCCHHHHHHHHc
Confidence 99999999976 99998875
No 2
>1v9m_A V-type ATP synthase subunit C; VOV1-ATPase, V-type ATPase, the C subunit, thermus thermophi riken structural genomics/proteomics initiative; 1.85A {Thermus thermophilus} SCOP: f.40.1.1 PDB: 1r5z_A 3j0j_M*
Probab=99.68 E-value=3.8e-16 Score=146.01 Aligned_cols=198 Identities=8% Similarity=-0.006 Sum_probs=162.2
Q ss_pred CCCHHhHHHHHcCCChHHHHHhcCCCCChhhhcCC----CCCCCHHHHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHH
Q 018709 27 LLTAADYNNLCQCETLDDIKMHLSATEYGPYLQNE----PSPLHTTTIVEKCTLKLVDEYKHMLCQATEPLSTFLEYITY 102 (351)
Q Consensus 27 lL~~~~~~~L~~~~s~~e~~~~L~~T~Y~~~l~~~----~~~~~~~~lE~~L~~~l~~~~~~l~~~~~~~~~~~~~~~~~ 102 (351)
.++.+++.+|++++|++|+...|++|+|+..+... ... +...+|.+|++.+++.+....+..++ ..+-+++..
T Consensus 118 ~~~~~~l~~l~~a~~~~el~~~L~~t~y~~~l~~~~~~~~~~-~~~~~e~~Ldk~y~~~~~~~~~~~~~--~~l~~~~~~ 194 (323)
T 1v9m_A 118 TLREEVWRQAYEAQDPAGMAQVLAVPGHPLARALRAVLRETQ-DLARVEALLAKRFFEDVAKAAKGLDQ--PALRDYLAL 194 (323)
T ss_dssp SSCHHHHHHHHHSSSHHHHHHHHHTTTCHHHHHHHHHHTTCC-CHHHHHHHHHHHHHHHHHC---------CHHHHHHHH
T ss_pred CCCHHHHHHHHhCCCHHHHHHHHhccccchHHHHHHHHHHcC-CcHHHHHHHHHHHHHHHHHHHhhcCh--HHHHHHHHH
Confidence 45677899999999999999999999988766542 223 78999999999999888776665555 578899999
Q ss_pred HHHHHHHHHHHHHHhCCCChhHHhhhhccCCC-Cc--chhHHHhcCCHHHHHHHhhhCCCChhhhhhhhcccccCCCCHH
Q 018709 103 GHMIDNVVLIVTGTLHERDVQELLEKCHPLGM-FD--SIATLAVAQNMRELYRLVLVDTPLAPYFSECITSEDLDDMNIE 179 (351)
Q Consensus 103 ~~di~NlK~llr~~~~g~~~~~i~~~l~~~G~-~~--~l~~L~~~~~~~el~~~l~~~t~y~~~l~~~~~~~~~~~~~~~ 179 (351)
+.|+.||++++|++..|.+ +...++|.|. ++ .+..++.+++ ++.+.+ ++|+|++.+.. .++.
T Consensus 195 ~iD~~Ni~~~lr~~~~~~~---i~~~li~~G~~l~~~~l~~l~~~~~--~~~~~l-~~t~Y~~~~~~---------~~~~ 259 (323)
T 1v9m_A 195 EVDAENLRTAFKLQGSGLA---PDAFFLKGGRFVDRVRFARLMEGDY--AVLDEL-SGTPFSGLSGV---------RDLK 259 (323)
T ss_dssp HHHHHHHHHHHHTTTSCCC---GGGTCCSSCSSCCHHHHHHHHTTCG--GGGGSC-TTSTTGGGTTC---------CSHH
T ss_pred HHHHHHHHHHHHHHHcCCC---HHHhccCCCCccCHHHHHHHHhCcH--HHHHHH-cCCCHHHHhcc---------CCHH
Confidence 9999999999999999986 6668889997 76 6888988877 888888 99999887753 2778
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCccHHHHHHHHHHHHHHHHHHHHHHhcCCCCCHHhhhccccC
Q 018709 180 IMRNTLYKAYLEDFYKFCQKLGGATAEIMSDLLAFEADRRAVNITINSIGTELTRDDRRKLYSN 243 (351)
Q Consensus 180 ~~E~~LD~~y~~~l~~~~~~~~~~~~~~l~~~~~~~iD~~Ni~~i~R~k~~~~~~e~~~~~l~~ 243 (351)
.+|..+|++.++.+.+ +..-+-.-..++..+...+.++.||+||++|+.+|+|+++++..+..
T Consensus 260 ~~E~~~~~~~~~~~~~-~~~~~f~~~~~~ayl~~kE~Ei~nl~~I~~~~~~~l~~e~i~~~l~~ 322 (323)
T 1v9m_A 260 ALERGLRCVLLKEAKK-GVQDPLGVGLVLAYVKEREWEAVRLRLLARRAYFGLPRAQVEEEVVC 322 (323)
T ss_dssp HHHHHHHHHHHHHHGG-GGGCTTSHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCHHHHHHHSCC
T ss_pred HHHHHHHHHHHHHHHH-hCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHcc
Confidence 8999999999988877 55534344678999999999999999999999999999999887653
No 3
>1w3w_A Annexin A8; coagulation, annexin family, calcium and phospholipid binding proteins; 1.99A {Homo sapiens} PDB: 1w45_A
Probab=58.98 E-value=11 Score=34.17 Aligned_cols=47 Identities=13% Similarity=0.206 Sum_probs=32.0
Q ss_pred HHH-HHHHHHHhcCCccHHHHHHHH-HHHHHHHHHHHHHHhcCCCCCHHh
Q 018709 189 YLE-DFYKFCQKLGGATAEIMSDLL-AFEADRRAVNITINSIGTELTRDD 236 (351)
Q Consensus 189 y~~-~l~~~~~~~~~~~~~~l~~~~-~~~iD~~Ni~~i~R~k~~~~~~e~ 236 (351)
||. .+.+.++..+.++...++-++ +.++|+.+|+..|+- .+|.+-+.
T Consensus 257 ~fA~~L~~amkg~GTdd~~LiriivsR~e~dl~~Ik~~y~~-~yg~sL~~ 305 (327)
T 1w3w_A 257 YFAERLYYAMKGAGTRDGTLIRNIVSRSEIDLNLIKCHFKK-MYGKTLSS 305 (327)
T ss_dssp HHHHHHHHHHSSSSCCHHHHHHHHHHHTTTTHHHHHHHHHH-HHSSCHHH
T ss_pred HHHHHHHhhccCCCCChhHeeeeeeECCHHHHHHHHHHHHH-HhCCcHHH
Confidence 444 444555567766666666666 458999999999984 46776543
No 4
>1n00_A Annexin GH1; membrane-binding, calcium-binding, membrane protein; 2.10A {Gossypium hirsutum} SCOP: a.65.1.1 PDB: 3brx_A 1ycn_A 2q4c_A 1dk5_A
Probab=44.45 E-value=49 Score=29.75 Aligned_cols=45 Identities=7% Similarity=0.009 Sum_probs=29.3
Q ss_pred HHHHHHHHhcCCccHHHHHHHH-HHHHHHHHHHHHHHhcCCCCCHHh
Q 018709 191 EDFYKFCQKLGGATAEIMSDLL-AFEADRRAVNITINSIGTELTRDD 236 (351)
Q Consensus 191 ~~l~~~~~~~~~~~~~~l~~~~-~~~iD~~Ni~~i~R~k~~~~~~e~ 236 (351)
+.+.+..+..+.++...++-++ ..++|+.+|+..|+ +.+|.+-+.
T Consensus 253 ~~L~~am~g~Gtd~~~Liriiv~rse~dl~~Ik~~y~-~~yg~sL~~ 298 (321)
T 1n00_A 253 KVLRLAINRRGTDEGALTRVVCTRAEVDLKVIADEYQ-RRNSVPLTR 298 (321)
T ss_dssp HHHHHHHTTCCSCTTHHHHHHHHHTTTTHHHHHHHHH-HHHSSCHHH
T ss_pred HHHHHHhccCCCCHHHHHHHHHHcCHHHHHHHHHHHH-HHhCCChHH
Confidence 4444555567655555665555 34699999999998 445666443
No 5
>1dm5_A Annexin XII E105K mutant homohexamer; novel PH-dependent hexamerization switch E76, low calcium form; 1.93A {Hydra vulgaris} SCOP: a.65.1.1 PDB: 1aei_A
Probab=43.10 E-value=51 Score=29.58 Aligned_cols=46 Identities=15% Similarity=0.130 Sum_probs=30.2
Q ss_pred HHHHHHHHHHhcCCccHHHHHHHH-HHHHHHHHHHHHHHhcCCCCCHH
Q 018709 189 YLEDFYKFCQKLGGATAEIMSDLL-AFEADRRAVNITINSIGTELTRD 235 (351)
Q Consensus 189 y~~~l~~~~~~~~~~~~~~l~~~~-~~~iD~~Ni~~i~R~k~~~~~~e 235 (351)
+-+.+.+..+..+.++...++-++ +.++|+.+|+..|+- .+|.+-+
T Consensus 248 ~A~~L~~am~g~Gtd~~~Liriiv~rse~dl~~Ik~~y~~-~yg~~L~ 294 (315)
T 1dm5_A 248 FAERLHHAMKGLGTSDKTLIRILVSRSEIDLANIKETFQA-MYGKSLY 294 (315)
T ss_dssp HHHHHHHHHCTTCCCHHHHHHHHHHHTTTTHHHHHHHHHH-HHSSCHH
T ss_pred HHHHHHHHhhcCCCCHHHHhHHHHhcCHHHHHHHHHHHHH-HhCCcHH
Confidence 334455555567666666665555 358999999999984 4566644
No 6
>1yii_A Annexin A5, annexin V, lipocortin V, endonexin II; membrane binding, matrix vessicle, protein and metal binding protein; 1.42A {Gallus gallus} PDB: 1yj0_A 1ala_A 1hvd_A 1anx_A 1anw_A 1avh_A 1avr_A 1hak_B* 1hvf_A 1hve_A 1hvg_A 1a8a_A* 1a8b_A* 2ie7_A 1g5n_A 2ie6_A 1bcz_A 1n41_A 1bcw_A 2ran_A ...
Probab=23.40 E-value=2.3e+02 Score=25.19 Aligned_cols=48 Identities=13% Similarity=0.142 Sum_probs=30.1
Q ss_pred HHHH-HHHHHHHhcCCccHHHHHHHH-HHHHHHHHHHHHHHhcCCCCCHHh
Q 018709 188 AYLE-DFYKFCQKLGGATAEIMSDLL-AFEADRRAVNITINSIGTELTRDD 236 (351)
Q Consensus 188 ~y~~-~l~~~~~~~~~~~~~~l~~~~-~~~iD~~Ni~~i~R~k~~~~~~e~ 236 (351)
.||. .+.+.+++.+.++...++-++ +.++|+.+|...|+ +.+|.+-+.
T Consensus 248 ~~~A~~L~~a~~g~Gtd~~~Lirilv~Rse~dl~~Ik~~y~-~~yg~~L~~ 297 (320)
T 1yii_A 248 AYFAETLYYSMKGAGTDDDTLIRVMVSRSEIDLLDIRHEFR-KNFAKSLYQ 297 (320)
T ss_dssp HHHHHHHHHHHSSSSCCHHHHHHHHHHHTTTTHHHHHHHHH-HHHSSCHHH
T ss_pred HHHHHHHHHhhccCCCcHHHHHHHHHhcCHHHHHHHHHHHH-HhcCCCHHH
Confidence 4454 444555556655555555555 34899999999998 445666543
No 7
>1b0n_B Protein (SINI protein); transcription regulator, antagonist, sporulation; 1.90A {Bacillus subtilis} SCOP: a.34.1.1
Probab=23.30 E-value=34 Score=22.45 Aligned_cols=27 Identities=15% Similarity=0.300 Sum_probs=22.2
Q ss_pred HHHHHHHHHHHhcCCCCCHHhhhcccc
Q 018709 216 ADRRAVNITINSIGTELTRDDRRKLYS 242 (351)
Q Consensus 216 iD~~Ni~~i~R~k~~~~~~e~~~~~l~ 242 (351)
.|..=+.-|.|++..|++.++|+.+|-
T Consensus 11 ~d~ewl~LI~~Ak~lGlsleEIrefL~ 37 (57)
T 1b0n_B 11 LDQEWVELMVEAKEANISPEEIRKYLL 37 (57)
T ss_dssp CCHHHHHHHHHHHHTTCCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCCHHHHHHHHH
Confidence 356667788999999999999988765
No 8
>2zhj_A Annexin A4; zynogen granule, membrane binding protein, metal binding protein, calcium, calcium/phospholipid-binding; 1.35A {Rattus norvegicus} PDB: 2zhi_A 2zoc_A 1ann_A 1i4a_A 1aow_A
Probab=19.34 E-value=4.3e+02 Score=23.40 Aligned_cols=45 Identities=16% Similarity=0.155 Sum_probs=27.2
Q ss_pred HHHHHHHHhcCCccHHHHHHHH-HHHHHHHHHHHHHHhcCCCCCHHh
Q 018709 191 EDFYKFCQKLGGATAEIMSDLL-AFEADRRAVNITINSIGTELTRDD 236 (351)
Q Consensus 191 ~~l~~~~~~~~~~~~~~l~~~~-~~~iD~~Ni~~i~R~k~~~~~~e~ 236 (351)
+.+++..++.+.++...++-++ +.++|+.+|...|+ +.+|.+-+.
T Consensus 255 ~~L~~a~~g~Gtde~~lirilv~Rs~~dl~~i~~~Y~-~~yg~~L~~ 300 (322)
T 2zhj_A 255 ERLYKSMKGLGTDDSTLIRVMVSRAEIDMLDIRANFK-RLYGKSLYS 300 (322)
T ss_dssp HHHHHHHSSSSCCHHHHHHHHHHHTTTTHHHHHHHHH-HHHSSCHHH
T ss_pred HHHHHHhccCCCCHHHHHHHHHHcCHHHHHHHHHHHH-HHhCCcHHH
Confidence 3444555565555444444444 34799999999998 345666443
No 9
>3bjv_A RMPA; alpha/beta three layer sandwich, transferase; 2.40A {Streptococcus mutans}
Probab=19.12 E-value=36 Score=26.92 Aligned_cols=34 Identities=18% Similarity=0.390 Sum_probs=26.8
Q ss_pred CCHHhHHHHHcCCChHHHHHhcCCCCChhhhcCC
Q 018709 28 LTAADYNNLCQCETLDDIKMHLSATEYGPYLQNE 61 (351)
Q Consensus 28 L~~~~~~~L~~~~s~~e~~~~L~~T~Y~~~l~~~ 61 (351)
-+++..++|.+++|.+|+.+.|++..|..+++.+
T Consensus 124 ~d~~~~~~L~~~~~~~ei~~~l~~~~~~~~~~~~ 157 (161)
T 3bjv_A 124 ELDHSIERLVNCKTPEEVLAMVEESKSSPYLEGL 157 (161)
T ss_dssp TSTTHHHHHHTCCSHHHHHHHHHHGGGSGGGCC-
T ss_pred cCHHHHHHHHhCCCHHHHHHHHHhccCccccccC
Confidence 3556677899999999999999887777776654
No 10
>2oqt_A Hypothetical protein SPY0176; APC29699, putative PTS IIA domain, streptococcus pyogenes M1 GAS, structural genomics, PSI-2; 2.41A {Streptococcus pyogenes serotype M1}
Probab=15.82 E-value=40 Score=26.72 Aligned_cols=35 Identities=14% Similarity=0.348 Sum_probs=23.9
Q ss_pred CCCHHhHHHHHcCCChHHHHHhcCCCCChhhhcCC
Q 018709 27 LLTAADYNNLCQCETLDDIKMHLSATEYGPYLQNE 61 (351)
Q Consensus 27 lL~~~~~~~L~~~~s~~e~~~~L~~T~Y~~~l~~~ 61 (351)
+-+++..++|.+++|.+|+.+.|++..|..++++.
T Consensus 124 l~d~~~~~~L~~~~~~~ei~~~l~~~~~~~~~~~~ 158 (162)
T 2oqt_A 124 FELDNAIERLVACQSPKEVLEMVEESKDSPYLEGM 158 (162)
T ss_dssp HTSTTHHHHHHTCCSHHHHHHHHHHHTCC------
T ss_pred HcCHHHHHHHHhCCCHHHHHHHHHhCcCccccccC
Confidence 34666778899999999999999887676666543
Done!