BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 018713
(351 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9CAR3|KINGL_ARATH SNF1-related protein kinase regulatory subunit gamma-1-like
OS=Arabidopsis thaliana GN=CBSCBS2 PE=2 SV=1
Length = 447
Score = 466 bits (1199), Expect = e-130, Method: Compositional matrix adjust.
Identities = 262/351 (74%), Positives = 304/351 (86%), Gaps = 1/351 (0%)
Query: 2 AQAEEAKEV-SKLSSCDAYFEAIQSRKKLPHSLQETLTAAFARIPVLSFPNVPGGRVIEI 60
++A E KE+ S +SSC+AYFE +QSRK LP SLQETL +AFA IPV SFP VPGGRVIEI
Sbjct: 4 SEAVEDKEIKSAVSSCEAYFEKVQSRKNLPKSLQETLNSAFAGIPVSSFPQVPGGRVIEI 63
Query: 61 MADTTIPDAVKILSECNILSAPVKIPDAPSSSDWKERYLGIVDYSAIILWVLETAELAAA 120
A+T + +AVKILS+ ILSAPV D SS DW+ERYLGI+DYS+IILWVLE+AELAA
Sbjct: 64 QAETPVSEAVKILSDSKILSAPVINTDHESSLDWRERYLGIIDYSSIILWVLESAELAAI 123
Query: 121 AFSVGTATAAGVGTGTVGALGALALGMTGPAAVAGLTVAAAGAAVAGGLAAEKGAGKDAP 180
A S +ATAAGVG G VGALG ALGMTGP A AGL AA GAAVAGG+AAE+G GKDAP
Sbjct: 124 ALSATSATAAGVGAGAVGALGVAALGMTGPVAAAGLAAAAVGAAVAGGVAAERGIGKDAP 183
Query: 181 TAADRLHEDFYKVILQEEPFKSTTVRSIIKSYRWAPFLPVATDDSMLSVLLLLSKYRLRN 240
TAAD+L +DFY+VILQEEPFKSTTVR+I+KS+RWAPFLPV+T+ SMLSV+LLLSKYRLRN
Sbjct: 184 TAADKLGKDFYEVILQEEPFKSTTVRTILKSFRWAPFLPVSTESSMLSVMLLLSKYRLRN 243
Query: 241 VPIIEPGTPDIKNYITQSAVVQGLEGCKGRDWFDIIASQPISDLGLPFMSSDEVITIQSN 300
VP+I+ G PDIKNY+TQSAVV GLEGCKGRDWFD I++ PISDLGLPFMS +EVI+I+S
Sbjct: 244 VPVIKTGEPDIKNYVTQSAVVHGLEGCKGRDWFDHISALPISDLGLPFMSPNEVISIESE 303
Query: 301 ELILEAFKRMKDNNIGGIPVVEGQQKKIVGNVSIRDIRHLLLKPELFSNFR 351
ELILEAFKRM+DNNIGG+PVVEG KKIVGN+S+RDIR+LLL+PE+FSNFR
Sbjct: 304 ELILEAFKRMRDNNIGGLPVVEGLNKKIVGNISMRDIRYLLLQPEVFSNFR 354
>sp|Q8LBB2|KING1_ARATH SNF1-related protein kinase regulatory subunit gamma-1
OS=Arabidopsis thaliana GN=KING1 PE=1 SV=2
Length = 424
Score = 210 bits (535), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 117/331 (35%), Positives = 182/331 (54%), Gaps = 38/331 (11%)
Query: 21 EAIQSRKKLPHSLQETLTAAFARIPVLSFPNVPGGRVIEIMADTTIPDAVKILSECNILS 80
E + +K S E L A F IPV +FP + IEI +DT++ +AV+ LS+ +LS
Sbjct: 33 EDLWDEQKPQLSPNEKLNACFESIPVSAFPLSSDSQDIEIRSDTSLAEAVQTLSKFKVLS 92
Query: 81 APVKIPDAPSSSDWKERYLGIVDYSAIILWVLETAELAAAAFSVGTATAAGVGTGTVGAL 140
APV DAP + W +RY+GIV++ I++W+L E
Sbjct: 93 APVVDVDAPEDASWIDRYIGIVEFPGIVVWLLHQLE------------------------ 128
Query: 141 GALALGMTGPAAVAGLTVAAAGAAVAGGLAAEKGAGKDAPTAADRLHEDFYKVILQEEPF 200
P + VAA+ G A T+ + F++V+ E +
Sbjct: 129 ---------PPSPRSPAVAASNGFSHDFTTDVLDNGDSAVTSGN-----FFEVLTSSELY 174
Query: 201 KSTTVRSIIKSYRWAPFLPVATDDSMLSVLLLLSKYRLRNVPIIEPGTPDIKNYITQSAV 260
K+T VR I ++RWAPFL + ++S L++LLLLSKY+++++P+++ G I+N ITQS V
Sbjct: 175 KNTKVRDISGTFRWAPFLALQKENSFLTMLLLLSKYKMKSIPVVDLGVAKIENIITQSGV 234
Query: 261 VQGLEGCKGRDWFDIIASQPISDLGLPFMSSDEVITIQSNELILEAFKRMKDNNIGGIPV 320
+ L C G WF+ + +S++GLP MS D +I I +E +L+AFK M+ IGGIPV
Sbjct: 235 IHMLAECAGLLWFEDWGIKTLSEVGLPIMSKDHIIKIYEDEPVLQAFKLMRRKRIGGIPV 294
Query: 321 VEGQQKKIVGNVSIRDIRHLLLKPELFSNFR 351
+E +K VGN+S+RD++ LL PE++ ++R
Sbjct: 295 IERNSEKPVGNISLRDVQFLLTAPEIYHDYR 325
>sp|Q9LEV3|CBSX3_ARATH CBS domain-containing protein CBSX3, mitochondrial OS=Arabidopsis
thaliana GN=CBSX3 PE=1 SV=1
Length = 206
Score = 43.9 bits (102), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/151 (25%), Positives = 72/151 (47%), Gaps = 22/151 (14%)
Query: 195 LQEEPFKSTTVRSIIKSYRWA---PFLPVATDDSMLSVLLLLSKYRLRNVPIIEPGTPDI 251
++E F+STT+ ++KS + +L TDD++ + ++++ + + +++PG
Sbjct: 47 MEESGFESTTISDVMKSKGKSADGSWLWCTTDDTVYDAVKSMTQHNVGALVVVKPGEQ-- 104
Query: 252 KNYITQSAVVQGLEGC-KGRDWFDIIASQPISD----LGLPFMSSDEVITIQSNELILEA 306
Q L G RD+ I Q S +G +++IT+ +L A
Sbjct: 105 ----------QALAGIITERDYLRKIIVQGRSSKSTKVGDIMTEENKLITVTPETKVLRA 154
Query: 307 FKRMKDNNIGGIPVVEGQQKKIVGNVSIRDI 337
+ M DN I IPV+ + K ++G VSI D+
Sbjct: 155 MQLMTDNRIRHIPVI--KDKGMIGMVSIGDV 183
>sp|Q5A744|SDS23_CANAL Protein SDS23 OS=Candida albicans (strain SC5314 / ATCC MYA-2876)
GN=SDS23 PE=2 SV=1
Length = 628
Score = 42.7 bits (99), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 39/166 (23%), Positives = 76/166 (45%), Gaps = 14/166 (8%)
Query: 187 HEDFYKVILQEEPFKSTTVRSIIKSYRWAPFLPVATDDSMLSVLLLLSKYRLRNVPIIEP 246
HE + I + + + V IIK + PF+ D++ SV+ L R E
Sbjct: 234 HEFVTQTISKAKRGEEVPVEFIIKLHPKNPFIKFNETDTLFSVMETLGNGVHRIAITNEE 293
Query: 247 GTPDIKNYITQSAVVQGL-EGCKGRDWFDIIASQPISDLGLPFMSSDEVITIQSNELILE 305
G I ++Q +++ + E + D + + DL + S ITI +++++E
Sbjct: 294 GN-KITGILSQRRLIKYMWENARRFPSLDFYLTSTLQDLKI---GSSNPITIYEDQMLIE 349
Query: 306 AFKRMKDNNIGGIPVVEGQQKKIVGNVSIRDIR--------HLLLK 343
A +M + + + V++ + + ++GN+SI D++ HLL K
Sbjct: 350 ALHKMFNERVSSLAVID-RSRTLIGNISIVDVKNVTSSKNSHLLFK 394
>sp|Q6CUE1|SDS23_KLULA Protein SDS23 OS=Kluyveromyces lactis (strain ATCC 8585 / CBS 2359
/ DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37) GN=SDS23
PE=3 SV=1
Length = 518
Score = 41.6 bits (96), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 34/145 (23%), Positives = 68/145 (46%), Gaps = 11/145 (7%)
Query: 205 VRSIIKSYRWAPFLPVATDDSMLSVLLLLSKYRLRNVPIIEPGTPDIKNYITQSAVVQGL 264
V IIK PF + +++ + +++L R V I I ++Q +++ L
Sbjct: 259 VGEIIKLTPKNPFYKLPEQENLSTAMMILGSGVHR-VAITNQENTKITGILSQRRLIKYL 317
Query: 265 -EGCKGRDWFDIIASQPISDLGL--------PFMSSDEVITIQSNELILEAFKRMKDNNI 315
+ + F+ + + + DL + P VI+IQ +EL++ A +M I
Sbjct: 318 WDNARSFQNFEHLFQKSLKDLKIGVLDTHTKPTSRQSRVISIQGDELLIMALFKMHTERI 377
Query: 316 GGIPVVEGQQKKIVGNVSIRDIRHL 340
I V++ Q ++GN+S+ D++H+
Sbjct: 378 SSIAVID-PQGNLLGNISVTDVKHI 401
>sp|A3LQC5|SDS23_PICST Protein SDS23 OS=Scheffersomyces stipitis (strain ATCC 58785 / CBS
6054 / NBRC 10063 / NRRL Y-11545) GN=SDS23 PE=3 SV=2
Length = 530
Score = 40.4 bits (93), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 40/177 (22%), Positives = 81/177 (45%), Gaps = 15/177 (8%)
Query: 176 GKDAPTAADRLHEDFYKVILQEEPFKSTTVRSIIKSYRWAPFLPVATDDSMLSVLLLLSK 235
G + + A + HE + I + + + + IIK + PF+ +D++ V+ L
Sbjct: 179 GNEHDSTAKK-HEIITQTINKAKRGEEVPIEFIIKLHPKNPFIKFTENDTLFKVMETLGN 237
Query: 236 YRLRNVPIIEPGTPDIKNYITQSAVVQGL-EGCKGRDWFDIIASQPISDLGLPFMSSDEV 294
R V I + I ++Q +++ + E + D + + DL + S
Sbjct: 238 GVHR-VAITNLESTKITGILSQRRLIKYMWENARRFPSLDFYLNSTLQDLKI---GSSTP 293
Query: 295 ITIQSNELILEAFKRMKDNNIGGIPVVEGQQKKIVGNVSIRDIR--------HLLLK 343
I I ++L++EA +M + + + V++ + K ++GN+SI D++ HLL K
Sbjct: 294 IFIYEDQLLIEALYKMFNERVSSLAVID-RTKSLIGNISIVDVKNVSSSKNSHLLFK 349
>sp|Q9UGI9|AAKG3_HUMAN 5'-AMP-activated protein kinase subunit gamma-3 OS=Homo sapiens
GN=PRKAG3 PE=1 SV=3
Length = 489
Score = 39.3 bits (90), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 35/153 (22%), Positives = 69/153 (45%), Gaps = 15/153 (9%)
Query: 194 ILQEEPFKSTTVRSIIKSYRWAPFLPVATDDSMLSVLLLLSKYRLRNVPIIEPGTPDIKN 253
I + E K T R I + P + ++ +DS+ + L K R+ +P+++P + ++ +
Sbjct: 261 IYEIEQHKIETWREIYLQGCFKPLVSISPNDSLFEAVYTLIKNRIHRLPVLDPVSGNVLH 320
Query: 254 YITQSAVVQGLEGCKGRDWFDIIASQP------ISDLGLPFMSSDEVITIQSNELILEAF 307
+T +++ L F + +P I DLG+ + ++ + IL A
Sbjct: 321 ILTHKRLLKFLH------IFGSLLPRPSFLYRTIQDLGI--GTFRDLAVVLETAPILTAL 372
Query: 308 KRMKDNNIGGIPVVEGQQKKIVGNVSIRDIRHL 340
D + +PVV + ++VG S D+ HL
Sbjct: 373 DIFVDRRVSALPVV-NECGQVVGLYSRFDVIHL 404
>sp|P15889|YR33_THEPE Uncharacterized 33.4 kDa protein in ribosomal RNA operon
OS=Thermofilum pendens PE=4 SV=1
Length = 300
Score = 39.3 bits (90), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 67/138 (48%), Gaps = 9/138 (6%)
Query: 213 RWAPFLPVATDDSMLSVLLLLSKYRLRNVPII-EPGTPDIKNYITQSAVVQGLEGCKGRD 271
R+ P V + +L VL+ + + R+R+VP++ E G +K ++ +V L G + RD
Sbjct: 10 RFPPLAVVPSSSRVLDVLVAMGRNRVRHVPLVDERGV--LKGMVSARDLVDFLGGRRFRD 67
Query: 272 ----WFDIIASQPISDLGLPFMSSDEVITIQSNELILEAFKRMKDNNIGGIPVVEGQQKK 327
F+ + + G+ F+ D ++L E + M + IG + VV+ + +
Sbjct: 68 VVEARFNGDVYKALEQTGVEFLKYDPPYVYTRSDL-REVIELMVERGIGALAVVD-EDLR 125
Query: 328 IVGNVSIRDIRHLLLKPE 345
+VG VS R + LL E
Sbjct: 126 VVGIVSERHVISLLANVE 143
>sp|Q6FMN0|SDS23_CANGA Protein SDS23 OS=Candida glabrata (strain ATCC 2001 / CBS 138 / JCM
3761 / NBRC 0622 / NRRL Y-65) GN=SDS23 PE=3 SV=1
Length = 548
Score = 39.3 bits (90), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 32/149 (21%), Positives = 71/149 (47%), Gaps = 11/149 (7%)
Query: 201 KSTTVRSIIKSYRWAPFLPVATDDSMLSVLLLLSKYRLRNVPIIEPGTPDIKNYITQSAV 260
K V I+K PF + +++ +V+ +L R V I P I+ ++Q +
Sbjct: 215 KPVAVGDIVKLTPKNPFYKLPETENLSTVMGILGSGVHR-VAITNPEMTQIRGILSQRRL 273
Query: 261 VQGL-EGCKGRDWFDIIASQPISDLGLPFMSSD--------EVITIQSNELILEAFKRMK 311
++ + + + + + + + DL + ++++ VI+IQ E ++ A +M
Sbjct: 274 IKYIWDNARSFGTLEPLLNSSLQDLKIGVLNTNSKPTSRQSRVISIQGEEPLIMALYKMH 333
Query: 312 DNNIGGIPVVEGQQKKIVGNVSIRDIRHL 340
I I V++ Q ++GN+S+ D++H+
Sbjct: 334 KERISSIAVID-PQGNLIGNISVTDVKHV 361
>sp|Q9MYP4|AAKG3_PIG 5'-AMP-activated protein kinase subunit gamma-3 OS=Sus scrofa
GN=PRKAG3 PE=1 SV=2
Length = 514
Score = 38.1 bits (87), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 35/153 (22%), Positives = 67/153 (43%), Gaps = 15/153 (9%)
Query: 194 ILQEEPFKSTTVRSIIKSYRWAPFLPVATDDSMLSVLLLLSKYRLRNVPIIEPGTPDIKN 253
I + E K T R I + P + ++ +DS+ + L K R+ +P+++P + + +
Sbjct: 286 IYEIEEHKIETWREIYLQGCFKPLVSISPNDSLFEAVYALIKNRIHRLPVLDPVSGAVLH 345
Query: 254 YITQSAVVQGLEGCKGRDWFDIIASQP------ISDLGLPFMSSDEVITIQSNELILEAF 307
+T +++ L F + +P I DLG+ ++ + IL A
Sbjct: 346 ILTHKRLLKFLH------IFGTLLPRPSFLYRTIQDLGIGTFR--DLAVVLETAPILTAL 397
Query: 308 KRMKDNNIGGIPVVEGQQKKIVGNVSIRDIRHL 340
D + +PVV + ++VG S D+ HL
Sbjct: 398 DIFVDRRVSALPVV-NETGQVVGLYSRFDVIHL 429
>sp|Q8BGM7|AAKG3_MOUSE 5'-AMP-activated protein kinase subunit gamma-3 OS=Mus musculus
GN=Prkag3 PE=1 SV=1
Length = 489
Score = 37.4 bits (85), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 34/153 (22%), Positives = 67/153 (43%), Gaps = 15/153 (9%)
Query: 194 ILQEEPFKSTTVRSIIKSYRWAPFLPVATDDSMLSVLLLLSKYRLRNVPIIEPGTPDIKN 253
I + E K T R I + P + ++ +DS+ + L K R+ +P+++P + +
Sbjct: 261 IYEIEEHKIETWREIYLQGCFKPLVSISPNDSLFEAVYALIKNRIHRLPVLDPVSGTVLY 320
Query: 254 YITQSAVVQGLEGCKGRDWFDIIASQP------ISDLGLPFMSSDEVITIQSNELILEAF 307
+T +++ L F + +P I DLG+ + ++ + +L A
Sbjct: 321 ILTHKRLLKFLH------IFGALLPRPSFLCRTIQDLGI--GTFRDLAVVLETAPVLTAL 372
Query: 308 KRMKDNNIGGIPVVEGQQKKIVGNVSIRDIRHL 340
D + +PVV + ++VG S D+ HL
Sbjct: 373 DIFVDRRVSALPVV-NESGQVVGLYSRFDVIHL 404
>sp|P53172|SDS23_YEAST Protein SDS23 OS=Saccharomyces cerevisiae (strain ATCC 204508 /
S288c) GN=SDS23 PE=1 SV=2
Length = 527
Score = 36.6 bits (83), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 18/54 (33%), Positives = 31/54 (57%), Gaps = 1/54 (1%)
Query: 287 PFMSSDEVITIQSNELILEAFKRMKDNNIGGIPVVEGQQKKIVGNVSIRDIRHL 340
P VI+IQ +E ++ A +M I I VV+ Q ++GN+S+ D++H+
Sbjct: 270 PTFKQSRVISIQGDEHLIMALHKMYVERISSIAVVDPQ-GNLIGNISVTDVKHV 322
>sp|A6ZUC0|SDS23_YEAS7 Protein SDS23 OS=Saccharomyces cerevisiae (strain YJM789) GN=SDS23
PE=3 SV=1
Length = 527
Score = 36.6 bits (83), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 18/54 (33%), Positives = 31/54 (57%), Gaps = 1/54 (1%)
Query: 287 PFMSSDEVITIQSNELILEAFKRMKDNNIGGIPVVEGQQKKIVGNVSIRDIRHL 340
P VI+IQ +E ++ A +M I I VV+ Q ++GN+S+ D++H+
Sbjct: 270 PTFKQSRVISIQGDEHLIMALHKMYVERISSIAVVDPQ-GNLIGNISVTDVKHV 322
>sp|O67820|IMDH_AQUAE Inosine-5'-monophosphate dehydrogenase OS=Aquifex aeolicus (strain
VF5) GN=guaB PE=3 SV=1
Length = 490
Score = 35.8 bits (81), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 35/55 (63%), Gaps = 3/55 (5%)
Query: 295 ITIQSNELILEAFKRMKDNNIGGIPVVEGQQKKIVGNVSIRDIRHLLLKPELFSN 349
+T++ + + EA M I G+PVV+ +++K++G ++ RD+R +KPE +S
Sbjct: 101 VTVKPDTRVKEALDIMAKYKISGVPVVD-EERKLIGILTNRDLR--FIKPEDYSK 152
Score = 32.7 bits (73), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 29/118 (24%), Positives = 58/118 (49%), Gaps = 15/118 (12%)
Query: 220 VATDDSMLSVLLLLSKYRLRNVPIIEPGTPDIKNYITQSAVVQGLEGCKGRDWFDIIASQ 279
V D + L +++KY++ VP++ D + + + L K D+ S+
Sbjct: 103 VKPDTRVKEALDIMAKYKISGVPVV-----DEERKLIGILTNRDLRFIKPEDY-----SK 152
Query: 280 PISDLGLPFMSSDEVITIQSNELILEAFKRMKDNNIGGIPVVEGQQKKIVGNVSIRDI 337
P+S+ FM+ + +IT + EA + + I +P+V+ ++ KI G ++I+DI
Sbjct: 153 PVSE----FMTKENLITAPEGITLDEAEEIFRKYKIEKLPIVD-KEGKIKGLITIKDI 205
>sp|Q2LL38|AAKG3_BOVIN 5'-AMP-activated protein kinase subunit gamma-3 OS=Bos taurus
GN=PRKAG3 PE=2 SV=2
Length = 497
Score = 35.4 bits (80), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 34/151 (22%), Positives = 67/151 (44%), Gaps = 10/151 (6%)
Query: 194 ILQEEPFKSTTVRSIIKSYRWAPFLPVATDDSMLSVLLLLSKYRLRNVPIIEPGTPDIKN 253
I + E K T R I + P + ++ DS+ + L K R+ +P+++P + + +
Sbjct: 268 IYEIEEHKIETWREIYLQGCFKPLVSISPSDSLFEAVYTLIKNRIHRLPVLDPVSGAVLH 327
Query: 254 YITQSAVVQGLEGCKG----RDWFDIIASQPISDLGLPFMSSDEVITIQSNELILEAFKR 309
+T +++ L + R F + I DLG+ + ++ + IL A
Sbjct: 328 ILTHKRLLKFLHIFQRTLLPRPSF---LYRTIQDLGI--GTFRDLAVVLETAPILTALDI 382
Query: 310 MKDNNIGGIPVVEGQQKKIVGNVSIRDIRHL 340
D + +PV+ + ++VG S D+ HL
Sbjct: 383 FVDRRVSALPVI-NEAGQVVGLYSRFDVIHL 412
>sp|P54606|YHCV_BACSU CBS domain-containing protein YhcV OS=Bacillus subtilis (strain
168) GN=yhcV PE=4 SV=1
Length = 140
Score = 35.4 bits (80), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 28/45 (62%), Gaps = 2/45 (4%)
Query: 293 EVITIQSNELILEAFKRMKDNNIGGIPVVEGQQKKIVGNVSIRDI 337
+V T+ N+ I EA MK +N+G IPVVE Q + G ++ RDI
Sbjct: 11 QVATVSPNQTIQEAASLMKQHNVGAIPVVE--QGVLKGMLTDRDI 53
>sp|A7TL18|SDS23_VANPO Protein SDS23 OS=Vanderwaltozyma polyspora (strain ATCC 22028 / DSM
70294) GN=SDS23 PE=3 SV=1
Length = 525
Score = 35.0 bits (79), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 16/54 (29%), Positives = 31/54 (57%), Gaps = 1/54 (1%)
Query: 287 PFMSSDEVITIQSNELILEAFKRMKDNNIGGIPVVEGQQKKIVGNVSIRDIRHL 340
P VI+IQ E ++ A ++ + I I VV+ Q ++GN+S+ D++++
Sbjct: 322 PTSKQSRVISIQGEEPLINALYKIHEERISSIAVVD-HQNNLIGNISVTDVKYV 374
>sp|P21879|IMDH_BACSU Inosine-5'-monophosphate dehydrogenase OS=Bacillus subtilis (strain
168) GN=guaB PE=1 SV=2
Length = 488
Score = 35.0 bits (79), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 37/130 (28%), Positives = 61/130 (46%), Gaps = 18/130 (13%)
Query: 216 PFLPVATDDSMLSVLLLLSKYRLRNVPIIEPGTPDIKNYITQSAVVQGLEGCKGRDW-FD 274
PF + D + L+ KYR+ VPI + N Q V G+ RD F
Sbjct: 99 PFF-LTPDHQVFDAEHLMGKYRISGVPI-------VNNEEDQKLV--GI--ITNRDLRFI 146
Query: 275 IIASQPISDLGLPFMSSDEVITIQSNELILEAFKRMKDNNIGGIPVVEGQQKKIVGNVSI 334
S ISD+ M+ +E++T + EA K ++ + I +P+V+ Q K+ G ++I
Sbjct: 147 SDYSMKISDV----MTKEELVTASVGTTLDEAEKILQKHKIEKLPLVD-DQNKLKGLITI 201
Query: 335 RDIRHLLLKP 344
+DI ++ P
Sbjct: 202 KDIEKVIEFP 211
>sp|B1L5U5|IMDH_KORCO Inosine-5'-monophosphate dehydrogenase OS=Korarchaeum cryptofilum
(strain OPF8) GN=guaB PE=3 SV=1
Length = 476
Score = 35.0 bits (79), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 31/45 (68%), Gaps = 2/45 (4%)
Query: 293 EVITIQSNELILEAFKRMKDNNIGGIPVVEGQQKKIVGNVSIRDI 337
+VIT+ + + EA + M+++ I G+PV+ G +K+VG V+ RD+
Sbjct: 96 DVITVSPEDSVEEARRLMREHGISGLPVIVG--RKLVGIVTRRDV 138
>sp|O34682|YLBB_BACSU Uncharacterized protein YlbB OS=Bacillus subtilis (strain 168)
GN=ylbB PE=4 SV=2
Length = 148
Score = 35.0 bits (79), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 32/51 (62%), Gaps = 3/51 (5%)
Query: 288 FMSSD-EVITIQSNELILEAFKRMKDNNIGGIPVVEGQQKKIVGNVSIRDI 337
M++D + T+ N + EA +MKD N+G IPVV+ + +VG V+ RD+
Sbjct: 7 LMTADLQYCTVLDN--VYEAAVKMKDANVGAIPVVDEDGETLVGIVTDRDL 55
>sp|P38314|SDS24_YEAST Protein SDS24 OS=Saccharomyces cerevisiae (strain ATCC 204508 /
S288c) GN=SDS24 PE=1 SV=1
Length = 527
Score = 34.7 bits (78), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 32/149 (21%), Positives = 68/149 (45%), Gaps = 11/149 (7%)
Query: 201 KSTTVRSIIKSYRWAPFLPVATDDSMLSVLLLLSKYRLRNVPIIEPGTPDIKNYITQSAV 260
K V ++K PF + ++S+ +V+ +L R V I +K ++Q +
Sbjct: 188 KPVPVGEMVKLTPKNPFYKLPENESLSTVMGILGSGVHR-VAITNEEMTKVKGILSQRRL 246
Query: 261 VQGL-EGCKGRDWFDIIASQPISDLGL--------PFMSSDEVITIQSNELILEAFKRMK 311
++ L + + + + + + DL + P VI+IQ E ++ +M
Sbjct: 247 IKYLWDNARSFTSLEPLLNSSLQDLHIGVLNIQSKPTSRQSRVISIQGEEPLIMGLYKMH 306
Query: 312 DNNIGGIPVVEGQQKKIVGNVSIRDIRHL 340
I I V++ +Q ++GN+S+ D++H+
Sbjct: 307 VERISSIAVID-KQGNLLGNISVTDVKHV 334
>sp|A6ZLF4|SDS24_YEAS7 Protein SDS24 OS=Saccharomyces cerevisiae (strain YJM789) GN=SDS24
PE=3 SV=1
Length = 527
Score = 34.7 bits (78), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 32/149 (21%), Positives = 68/149 (45%), Gaps = 11/149 (7%)
Query: 201 KSTTVRSIIKSYRWAPFLPVATDDSMLSVLLLLSKYRLRNVPIIEPGTPDIKNYITQSAV 260
K V ++K PF + ++S+ +V+ +L R V I +K ++Q +
Sbjct: 188 KPVPVGEMVKLTPKNPFYKLPENESLSTVMGILGSGVHR-VAITNEEMTKVKGILSQRRL 246
Query: 261 VQGL-EGCKGRDWFDIIASQPISDLGL--------PFMSSDEVITIQSNELILEAFKRMK 311
++ L + + + + + + DL + P VI+IQ E ++ +M
Sbjct: 247 IKYLWDNARSFTSLEPLLNSSLQDLHIGVLNIQSKPTSRQSRVISIQGEEPLIMGLYKMH 306
Query: 312 DNNIGGIPVVEGQQKKIVGNVSIRDIRHL 340
I I V++ +Q ++GN+S+ D++H+
Sbjct: 307 VERISSIAVID-KQGNLLGNISVTDVKHV 334
>sp|Q6BMN7|SDS23_DEBHA Protein SDS23 OS=Debaryomyces hansenii (strain ATCC 36239 / CBS 767
/ JCM 1990 / NBRC 0083 / IGC 2968) GN=SDS23 PE=3 SV=2
Length = 550
Score = 34.7 bits (78), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 34/145 (23%), Positives = 66/145 (45%), Gaps = 14/145 (9%)
Query: 208 IIKSYRWAPFLPVATDDSMLSVLLLLSKYRLRNVPIIEPGTPDIKNYITQSAVVQGL-EG 266
I+K + PF+ + D++ + L R V I I ++Q +++ + E
Sbjct: 224 IVKLHPKNPFVKFSEQDTLYKAMESLGNGVHR-VAITNMNGTKITGILSQRRLIKYMWEN 282
Query: 267 CKGRDWFDIIASQPISDLGLPFMSSDEVITIQSNELILEAFKRMKDNNIGGIPVVEGQQK 326
+ D + + DL + S+ ITI ++L++EA +M + + VV+ +
Sbjct: 283 ARRFPSLDFYINSTLQDLKI---GSNNPITIYEDQLLIEALLKMFTERVTSLAVVD-KTM 338
Query: 327 KIVGNVSIRDIR--------HLLLK 343
++GN+SI D++ HLL K
Sbjct: 339 ALIGNISIVDVKNVTSSKNSHLLFK 363
>sp|P32987|YBP3_ACIAM Uncharacterized 17.7 kDa protein in bps2 3'region OS=Acidianus
ambivalens PE=4 SV=1
Length = 164
Score = 34.3 bits (77), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 33/49 (67%), Gaps = 1/49 (2%)
Query: 289 MSSDEVITIQSNELILEAFKRMKDNNIGGIPVVEGQQKKIVGNVSIRDI 337
+++ +V ++ N I EA K MK++N+G + V++ Q ++VG ++ RDI
Sbjct: 8 IATTKVYVVKPNVTIAEAAKEMKEHNLGSLVVID-SQNRVVGIITERDI 55
>sp|Q58629|Y1232_METJA Uncharacterized protein MJ1232 OS=Methanocaldococcus jannaschii
(strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC
100440) GN=MJ1232 PE=4 SV=1
Length = 296
Score = 33.9 bits (76), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 28/45 (62%), Gaps = 1/45 (2%)
Query: 293 EVITIQSNELILEAFKRMKDNNIGGIPVVEGQQKKIVGNVSIRDI 337
+VITI +E I +A K M NN+G + +V+ KIVG ++ DI
Sbjct: 239 DVITIHKDEKIYDALKIMNKNNVGRLVIVD-DNNKIVGIITRTDI 282
>sp|A5DNL9|SDS23_PICGU Protein SDS23 OS=Meyerozyma guilliermondii (strain ATCC 6260 / CBS
566 / DSM 6381 / JCM 1539 / NBRC 10279 / NRRL Y-324)
GN=SDS23 PE=3 SV=2
Length = 536
Score = 33.9 bits (76), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 26/136 (19%), Positives = 67/136 (49%), Gaps = 8/136 (5%)
Query: 208 IIKSYRWAPFLPVATDDSMLSVLLLLSKYRLRNVPIIEPGTPD--IKNYITQSAVVQGL- 264
I++ + PF+ +++ + L + V I + +P I ++Q +++ +
Sbjct: 189 ILRLHPKNPFIKFPEQETLYPAMEALGN-GVHRVAITKDSSPHAPITGILSQRRLIKYMW 247
Query: 265 EGCKGRDWFDIIASQPISDLGLPFMSSDEVITIQSNELILEAFKRMKDNNIGGIPVVEGQ 324
E + D + + I DL + S +TI ++ +++A ++M + + V++ +
Sbjct: 248 ENARRFPSLDFLINSTIQDLNI---GSSNPLTIHGDQPLIDALQKMFTERVSSLAVID-R 303
Query: 325 QKKIVGNVSIRDIRHL 340
+ ++GN+SI D++H+
Sbjct: 304 SRCLMGNISIVDVKHV 319
>sp|Q751L7|PYRG_ASHGO CTP synthase OS=Ashbya gossypii (strain ATCC 10895 / CBS 109.51 /
FGSC 9923 / NRRL Y-1056) GN=URA7 PE=3 SV=1
Length = 576
Score = 33.5 bits (75), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 46/96 (47%), Gaps = 21/96 (21%)
Query: 270 RDWFDIIASQPISDLGLPFMSSDEVIT--------IQSNELILEAFKRM-----KDN--- 313
+DW + +A P+ D G M D I I+S + EA ++ +DN
Sbjct: 122 QDWLERVARIPVDDSG---MEPDVCIIELGGTVGDIESAPFV-EALRQFQFRVGRDNFAL 177
Query: 314 -NIGGIPVVEGQQKKIVGNVSIRDIRHLLLKPELFS 348
++ +PV+ G+QK +I+D+R L L P++ +
Sbjct: 178 IHVSLVPVIHGEQKTKPTQAAIKDLRSLGLTPDMIA 213
>sp|Q54H97|Y8960_DICDI CBS domain-containing protein DDB_G0289609 OS=Dictyostelium
discoideum GN=DDB_G0289609 PE=2 SV=1
Length = 145
Score = 33.1 bits (74), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 34/49 (69%), Gaps = 1/49 (2%)
Query: 295 ITIQSNELILEAFKRMKDNNIGGIPVVEGQQKKIVGNVSIRDIRHLLLK 343
+TI+ ++EA K M+ N+GG+PV++ ++ +++G V+ D+ LL+K
Sbjct: 89 VTIEDFSPVVEAAKLMRVTNVGGLPVLD-KKGRLIGMVTRSDLLDLLIK 136
>sp|Q58622|Y1225_METJA Uncharacterized protein MJ1225 OS=Methanocaldococcus jannaschii
(strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC
100440) GN=MJ1225 PE=1 SV=1
Length = 280
Score = 33.1 bits (74), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 30/123 (24%), Positives = 58/123 (47%), Gaps = 15/123 (12%)
Query: 230 LLLLSKYRLRNVPIIEPGTPDIKNYITQSAVVQGLEGC--------KGRDWFDIIASQPI 281
L+ +++ + R +P++ G + IT +V + G K F ++P+
Sbjct: 27 LMTMNENKYRRLPVVNAGNNKVVGIITSMDIVDFMGGGSKYNLIREKHERNFLAAINEPV 86
Query: 282 SDLGLPFMSSDEVITIQSNELILEAFKRMKDNNIGGIPVVEGQQKKIVGNVSIRD-IRHL 340
++ + VIT++ N I EA + N+GG P+V + +++ ++ RD IR L
Sbjct: 87 REI-----MEENVITLKENADIDEAIETFLTKNVGGAPIV-NDENQLISLITERDVIRAL 140
Query: 341 LLK 343
L K
Sbjct: 141 LDK 143
>sp|Q59011|IMDH_METJA Inosine-5'-monophosphate dehydrogenase OS=Methanocaldococcus
jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM
10045 / NBRC 100440) GN=guaB PE=3 SV=1
Length = 496
Score = 33.1 bits (74), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 16/46 (34%), Positives = 31/46 (67%), Gaps = 1/46 (2%)
Query: 293 EVITIQSNELILEAFKRMKDNNIGGIPVVEGQQKKIVGNVSIRDIR 338
+VIT+ ++ + EA M+ +I G+PVV+ + K+VG ++ RD++
Sbjct: 99 DVITVSPDDTVGEAINVMETYSISGLPVVDNED-KLVGIITHRDVK 143
>sp|Q58799|Y1404_METJA Uncharacterized protein MJ1404 OS=Methanocaldococcus jannaschii
(strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC
100440) GN=MJ1404 PE=4 SV=1
Length = 421
Score = 32.7 bits (73), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 33/56 (58%), Gaps = 4/56 (7%)
Query: 273 FDIIA----SQPISDLGLPFMSSDEVITIQSNELILEAFKRMKDNNIGGIPVVEGQ 324
+DI+A S+ + D + + + VITI N+ I +A M+DNNIG + VV+ +
Sbjct: 118 YDIMARAAKSKIMKDTKVTKIMTRNVITINENDSIGKARALMRDNNIGRLVVVDDE 173
>sp|Q09826|SDS23_SCHPO Protein sds23/moc1 OS=Schizosaccharomyces pombe (strain 972 / ATCC
24843) GN=sds23 PE=1 SV=1
Length = 408
Score = 31.6 bits (70), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 13/52 (25%), Positives = 32/52 (61%), Gaps = 1/52 (1%)
Query: 289 MSSDEVITIQSNELILEAFKRMKDNNIGGIPVVEGQQKKIVGNVSIRDIRHL 340
+ S ++ I ++ + A ++M IG + VV+ Q +++GN+S+ D++++
Sbjct: 213 IGSTDITCISGDQKVAAALRQMNQTGIGSLAVVDAQ-FRLLGNISLVDVKYV 263
>sp|Q0AIP0|DAPF_NITEC Diaminopimelate epimerase OS=Nitrosomonas eutropha (strain C91)
GN=dapF PE=1 SV=1
Length = 278
Score = 31.6 bits (70), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 37/142 (26%), Positives = 59/142 (41%), Gaps = 17/142 (11%)
Query: 40 AFARIPVLSFPNVPGGRVIEIMA-DTTIPDAVKILSECNILSAPVKIPDAPSSSDWKERY 98
A R+PV +P G + IEI A P AV+I+ + ++ + P + + ER
Sbjct: 136 AAQRMPV--YPLQIGDKTIEISAVSIGNPHAVQIIPDIDLAPVTTEGPKIEAHPLFPERV 193
Query: 99 LGIVDYSAIILWVLETAELAAAAFSVGTATAAGVGTGTVGALGALALGMTGPAAVAGLTV 158
+A + +++ A + F GT GT GA A+ G+ + GL
Sbjct: 194 ------NAGFMQIIDRAHIRLRVFERGTGETLACGT---GACAAVVCGI-----LRGLLD 239
Query: 159 AAAGAAVAGGLAAEKGAGKDAP 180
A+ GG + GKD P
Sbjct: 240 TTVQVAMHGGNLQIRWDGKDKP 261
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.317 0.134 0.382
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 125,402,305
Number of Sequences: 539616
Number of extensions: 5242383
Number of successful extensions: 22646
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 45
Number of HSP's successfully gapped in prelim test: 127
Number of HSP's that attempted gapping in prelim test: 21111
Number of HSP's gapped (non-prelim): 1385
length of query: 351
length of database: 191,569,459
effective HSP length: 118
effective length of query: 233
effective length of database: 127,894,771
effective search space: 29799481643
effective search space used: 29799481643
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 62 (28.5 bits)