Query 018714
Match_columns 351
No_of_seqs 133 out of 305
Neff 7.2
Searched_HMMs 13730
Date Mon Mar 25 04:56:13 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/018714.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/018714hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1seta1 a.2.7.1 (A:1-110) Sery 54.0 34 0.0025 24.4 8.6 57 259-316 41-97 (110)
2 d1wu9a1 a.245.1.1 (A:191-249) 31.2 38 0.0027 21.9 4.6 32 292-323 3-34 (59)
3 d1u5ta1 a.4.5.54 (A:20-164) Va 27.2 22 0.0016 27.4 3.4 20 97-116 70-89 (145)
4 d1lvfa_ a.47.2.1 (A:) Syntaxin 23.8 85 0.0062 22.2 6.1 28 288-315 40-67 (106)
5 d1fxka_ a.2.5.1 (A:) Prefoldin 22.3 94 0.0068 21.8 6.1 38 290-327 65-102 (107)
6 d1b5la_ a.26.1.3 (A:) Interfer 22.1 1.5E+02 0.011 22.7 7.7 47 64-111 50-99 (164)
7 d1ez3a_ a.47.2.1 (A:) Syntaxin 20.3 1.4E+02 0.01 21.1 8.3 30 286-315 48-77 (124)
8 d1zl8a1 a.194.1.1 (A:4-53) Lin 17.9 24 0.0018 21.9 1.4 13 109-121 37-49 (50)
9 d1wa8b1 a.25.3.1 (B:602-695) E 17.5 81 0.0059 21.3 4.7 11 262-272 7-17 (94)
10 d1wu3i_ a.26.1.3 (I:) Interfer 16.0 1.6E+02 0.012 22.4 6.6 47 64-111 48-97 (161)
No 1
>d1seta1 a.2.7.1 (A:1-110) Seryl-tRNA synthetase (SerRS) {Thermus thermophilus, strain hb27 [TaxId: 274]}
Probab=54.00 E-value=34 Score=24.43 Aligned_cols=57 Identities=18% Similarity=0.243 Sum_probs=32.4
Q ss_pred HhHHHHHHHHHHHHHHHHhhccchHHHHHHHHHHHHHHHHHHHHhhchHHHHHHHhHH
Q 018714 259 LNELEAVDGSVKKLYEVIQNEVDTVEEELLQKSVLDLGKRADNLSQGLDHLTKAVDGF 316 (351)
Q Consensus 259 l~El~~vd~av~~L~~~i~~~~~~e~~~~~~~~veel~~~~e~Le~gle~Le~~vd~l 316 (351)
..+++.+.+--..+-..|... ..++.+++...+..|+..+..++..+..++.+++.+
T Consensus 41 ~~~~e~l~~~rN~~sk~i~k~-~~~~~~~l~~~~k~lk~~i~~le~~~~~~~~~l~~~ 97 (110)
T d1seta1 41 KKRLQEVQTERNQVAKRVPKA-PPEEKEALIARGKALGEEAKRLEEALREKEARLEAL 97 (110)
T ss_dssp HHHHHHHHHHHHHHHHHGGGC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHh-hccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 344555554444444443222 234445566777777777777777777777665544
No 2
>d1wu9a1 a.245.1.1 (A:191-249) Microtubule-associated protein EB1, C-terminal dimerization domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=31.22 E-value=38 Score=21.87 Aligned_cols=32 Identities=19% Similarity=0.220 Sum_probs=27.3
Q ss_pred HHHHHHHHHHHhhchHHHHHHHhHHHHHHHHh
Q 018714 292 VLDLGKRADNLSQGLDHLTKAVDGFFKIVLSG 323 (351)
Q Consensus 292 veel~~~~e~Le~gle~Le~~vd~lFr~li~~ 323 (351)
+.+|...+..|...++.+|++=|..|..|...
T Consensus 3 ~~~L~~ei~elk~~v~~lEkERdFYF~KLRdI 34 (59)
T d1wu9a1 3 AAELMQQVNVLKLTVEDLEKERDFYFGKLRNI 34 (59)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 66788888888999999999999999988654
No 3
>d1u5ta1 a.4.5.54 (A:20-164) Vacuolar sorting protein SNF8 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=27.24 E-value=22 Score=27.36 Aligned_cols=20 Identities=20% Similarity=0.615 Sum_probs=17.8
Q ss_pred HHHHHhhhhhHHhHHHHHHH
Q 018714 97 IDVYLDISVNLLDICIAFSS 116 (351)
Q Consensus 97 vdeyLD~SlkLLDvCna~k~ 116 (351)
=|=|.+=++++.|+|-++++
T Consensus 70 gDFYyEL~VqIvEvC~~tr~ 89 (145)
T d1u5ta1 70 NDFYYEVCLKVIEICRQTKD 89 (145)
T ss_dssp HHHHHHHHHHHHHHHHHHTT
T ss_pred cchHHHHHHHHHHHHHHhhh
Confidence 36689999999999999986
No 4
>d1lvfa_ a.47.2.1 (A:) Syntaxin 6, SNAP-25 homolog {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=23.81 E-value=85 Score=22.16 Aligned_cols=28 Identities=11% Similarity=0.208 Sum_probs=20.2
Q ss_pred HHHHHHHHHHHHHHHhhchHHHHHHHhH
Q 018714 288 LQKSVLDLGKRADNLSQGLDHLTKAVDG 315 (351)
Q Consensus 288 ~~~~veel~~~~e~Le~gle~Le~~vd~ 315 (351)
+...-.+|+..|+.++.-|++|++-|.-
T Consensus 40 ~~~~~~eL~~~l~siewdL~dLe~av~~ 67 (106)
T d1lvfa_ 40 IDWTTNELRNNLRSIEWDLEDLDETISI 67 (106)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhHHHHHHHHHHH
Confidence 4556777777777777777777777763
No 5
>d1fxka_ a.2.5.1 (A:) Prefoldin beta subunit {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}
Probab=22.32 E-value=94 Score=21.76 Aligned_cols=38 Identities=8% Similarity=0.114 Sum_probs=22.3
Q ss_pred HHHHHHHHHHHHHhhchHHHHHHHhHHHHHHHHhHHHH
Q 018714 290 KSVLDLGKRADNLSQGLDHLTKAVDGFFKIVLSGRDAL 327 (351)
Q Consensus 290 ~~veel~~~~e~Le~gle~Le~~vd~lFr~li~~R~~L 327 (351)
+.+.+|...++.++..|+.+++++..+=..+-+-+..+
T Consensus 65 e~~~~l~~~~e~l~~~i~~l~~q~~~l~~~l~~~~~~l 102 (107)
T d1fxka_ 65 ELTEELQEKLETLQLREKTIERQEERVMKKLQEMQVNI 102 (107)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 45556666666666666666666666655555555544
No 6
>d1b5la_ a.26.1.3 (A:) Interferon-tau {Sheep (Ovis aries) [TaxId: 9940]}
Probab=22.15 E-value=1.5e+02 Score=22.69 Aligned_cols=47 Identities=19% Similarity=0.257 Sum_probs=36.0
Q ss_pred HHHHHHHHHHHHHHHHHHHhhcCCCCCchhhhHHHHHHhhh---hhHHhHH
Q 018714 64 MRLAMESLCETHNVIKDLITELELPVSDWDEKWIDVYLDIS---VNLLDIC 111 (351)
Q Consensus 64 l~~~l~~L~~~h~~~~~Li~~~~lp~~~~~~k~vdeyLD~S---lkLLDvC 111 (351)
-.++...+.++-+++-.|+..-..|.+ |++..+|.++.+= +.-|+.|
T Consensus 50 k~~a~~~~~emlqqif~LF~~~~s~a~-W~~t~le~fl~~L~~Ql~~Le~C 99 (164)
T d1b5la_ 50 KDQAFPVLYEMLQQSFNLFYTEHSSAA-WDTTLLEQLCTGLQQQLDHLDTC 99 (164)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTTSC-TTCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCChhc-cCHHHHHHHHHHHHHHHHHHHHH
Confidence 357888899999999999976666654 9999999886554 5666777
No 7
>d1ez3a_ a.47.2.1 (A:) Syntaxin 1A N-terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=20.31 E-value=1.4e+02 Score=21.13 Aligned_cols=30 Identities=20% Similarity=0.390 Sum_probs=19.0
Q ss_pred HHHHHHHHHHHHHHHHHhhchHHHHHHHhH
Q 018714 286 ELLQKSVLDLGKRADNLSQGLDHLTKAVDG 315 (351)
Q Consensus 286 ~~~~~~veel~~~~e~Le~gle~Le~~vd~ 315 (351)
..+...+.++++....+...|+.|+..++.
T Consensus 48 ~~l~~~~~~i~~~a~~ik~~Lk~l~~~~~~ 77 (124)
T d1ez3a_ 48 EELEELMSDIKKTANKVRSKLKSIEQSIEQ 77 (124)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 345566666666666667777766666543
No 8
>d1zl8a1 a.194.1.1 (A:4-53) Lin-7 {Caenorhabditis elegans [TaxId: 6239]}
Probab=17.86 E-value=24 Score=21.87 Aligned_cols=13 Identities=23% Similarity=0.199 Sum_probs=10.0
Q ss_pred hHHHHHHHHHhhh
Q 018714 109 DICIAFSSVLTKV 121 (351)
Q Consensus 109 DvCna~k~~l~~~ 121 (351)
|+|+++|+.-.++
T Consensus 37 dF~~avREVYe~v 49 (50)
T d1zl8a1 37 EFFGAVREVYETV 49 (50)
T ss_dssp SHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhc
Confidence 8999998876543
No 9
>d1wa8b1 a.25.3.1 (B:602-695) ESAT-6, EsxA {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=17.54 E-value=81 Score=21.35 Aligned_cols=11 Identities=0% Similarity=0.380 Sum_probs=5.0
Q ss_pred HHHHHHHHHHH
Q 018714 262 LEAVDGSVKKL 272 (351)
Q Consensus 262 l~~vd~av~~L 272 (351)
|..++.+...+
T Consensus 7 ~~~l~~~a~~i 17 (94)
T d1wa8b1 7 FAGIEAAASAI 17 (94)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 44444444443
No 10
>d1wu3i_ a.26.1.3 (I:) Interferon-beta {Mouse (Mus musculus) [TaxId: 10090]}
Probab=15.96 E-value=1.6e+02 Score=22.38 Aligned_cols=47 Identities=13% Similarity=0.092 Sum_probs=31.8
Q ss_pred HHHHHHHHHHHHHHHHHHHhhcCCCCCchhhhHHHHHHhh---hhhHHhHH
Q 018714 64 MRLAMESLCETHNVIKDLITELELPVSDWDEKWIDVYLDI---SVNLLDIC 111 (351)
Q Consensus 64 l~~~l~~L~~~h~~~~~Li~~~~lp~~~~~~k~vdeyLD~---SlkLLDvC 111 (351)
-.+++..+.++-+++-.|+..-..|. .|++..+|.++.+ -+.-|+.|
T Consensus 48 k~~a~~v~~emlQqif~LF~~~~ssa-~Wnet~le~fl~~L~~Ql~~Le~C 97 (161)
T d1wu3i_ 48 KSYTAFAIQEMLQNVFLVFRNNFSST-GWNETIVVRLLDELHQQTVFLKTV 97 (161)
T ss_dssp HHHHHHHHHHHHHHHHHHTTSCCGGG-TCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCCcc-cCCHHHHHHHHHHHHHHHHHHHHH
Confidence 35678888888888888884333333 5999988887554 34455555
Done!