Query 018717
Match_columns 351
No_of_seqs 150 out of 750
Neff 7.6
Searched_HMMs 46136
Date Fri Mar 29 03:27:07 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/018717.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/018717hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PF12819 Malectin_like: Carboh 100.0 5.9E-79 1.3E-83 590.6 35.7 318 8-326 1-347 (347)
2 PLN03150 hypothetical protein; 100.0 2.2E-69 4.9E-74 560.0 36.0 334 3-350 23-385 (623)
3 PF11721 Malectin: Di-glucose 99.4 8.4E-13 1.8E-17 116.2 8.9 136 6-146 3-174 (174)
4 PF11721 Malectin: Di-glucose 99.4 2.8E-13 6E-18 119.3 3.5 102 168-280 2-118 (174)
5 PLN03150 hypothetical protein; 99.4 8.5E-12 1.8E-16 130.2 14.1 147 6-153 194-364 (623)
6 PF12819 Malectin_like: Carboh 98.9 7E-09 1.5E-13 101.0 11.4 145 5-151 180-347 (347)
7 KOG3593 Predicted receptor-lik 69.6 2.2 4.8E-05 40.2 1.1 145 165-326 58-228 (355)
8 KOG3593 Predicted receptor-lik 66.8 2.2 4.8E-05 40.3 0.5 87 6-99 62-158 (355)
9 KOG1263 Multicopper oxidases [ 31.4 2.5E+02 0.0054 29.4 8.7 80 63-149 209-288 (563)
10 PF08263 LRRNT_2: Leucine rich 21.6 55 0.0012 21.2 1.2 15 336-350 2-16 (43)
11 PLN02792 oxidoreductase 20.6 6.7E+02 0.014 26.1 9.5 67 61-134 191-257 (536)
12 PRK06764 hypothetical protein; 20.3 1.1E+02 0.0023 23.6 2.7 20 61-80 74-93 (105)
No 1
>PF12819 Malectin_like: Carbohydrate-binding protein of the ER; InterPro: IPR024788 Malectin is a membrane-anchored protein of the endoplasmic reticulum that recognises and binds Glc2-N-glycan []. This entry represents a malectin-like domain found in a number of plant receptor kinases.
Probab=100.00 E-value=5.9e-79 Score=590.65 Aligned_cols=318 Identities=37% Similarity=0.642 Sum_probs=263.8
Q ss_pred EccCCCCC---CcCC-CCCeeecCCCcccCCcceeccC-----CCCCCCcceeEeeeCCCCCceEEEeec--CCCeEEEE
Q 018717 8 IDCGSSES---YTDE-NGIEWTGDDAYIQNGDNKTVAY-----PSLVPYPMSTMRVFSTRKKNCYSFKVD--EGERVLVR 76 (351)
Q Consensus 8 IdCG~~~~---~~d~-~g~~w~~D~~f~~~g~~~~v~~-----~~~~~~~y~t~R~F~~~~~~cY~~~v~--~g~~ylVR 76 (351)
||||++.+ |+|. +||+|++|.+|+++|.++.++. .....++|+|||+||+|.|+||+||+. +|+|||||
T Consensus 1 IdCG~~~~~s~y~D~~tg~~~~~D~~~~~~g~~~~i~~~~~~~~~~~~~~y~taR~F~~g~r~cY~l~~~~~~~~~yliR 80 (347)
T PF12819_consen 1 IDCGSSSNSSSYVDDSTGRTWVSDDDFIDTGKSGNISSQPDSSSSDSSPPYQTARIFPEGSRNCYTLPVTPPGGGKYLIR 80 (347)
T ss_pred CcCCCCCCCcccccCCCCcEEeCCCCcccCCCccccccccCCcCCccccccceEEEcCCCCccEEEeeccCCCCceEEEE
Confidence 79999754 6774 7999999999999999887732 113568999999999998999999987 56699999
Q ss_pred EEEecCCCCCCC-----CCCeEEEEeCCcEEEEEEeCCCCcceeEEEEEEEee-CCcEEEEEEecCCCCCCeeEEEEEEE
Q 018717 77 ASFYYGNYDRKN-----SPPVFDLQFDGNFWTTVNTSLRSYDVLSYEAIYVVK-RNFTSICVAQTKPGQLPFISAIEVRS 150 (351)
Q Consensus 77 l~F~ygnyd~~~-----~~~~Fdv~~~~~~~~tv~~~~~~~~~~~~E~i~~~~-~~~l~vcf~~~~~~s~pFIsaiEl~~ 150 (351)
|||+|||||+++ .++.|+|++|++.|.+|+.+.+...+++||+++.+. ++.|+|||+|+++|++||||||||||
T Consensus 81 l~F~~gnyd~~~fs~~~~~~~FdL~~~~n~~~tV~~~~~~~~~~~~E~ii~v~~~~~l~vclv~~~~g~~pFIsaiEl~~ 160 (347)
T PF12819_consen 81 LHFYYGNYDGLNFSVSSSPPTFDLLLGFNFWSTVNLSNSPSSPVVKEFIINVTWSDTLSVCLVPTGSGTFPFISAIELRP 160 (347)
T ss_pred EEeccccccccccccccCCcceEEEECCceeEEEEecCCCcceEEEEEEEEEcCCCcEEEEEEeCCCCCCCceeEEEEEE
Confidence 999999999874 247799999999999999865322479999888877 79999999999876569999999999
Q ss_pred cCCccccc--cCccceeeEEEeeecCcccccccCCCCCCCceecCCC-CCCceeecccceeee--cc-CCCCCCchhhhh
Q 018717 151 LGINMYSQ--VPSNLALHLIQRAAMGANQTIIRYPDDAYDRTWNGAY-GFGLSEVASQALSIN--IT-TNNSPPTAVPKN 224 (351)
Q Consensus 151 l~~~~y~~--~~~~~~l~~~~R~n~G~~~~~~ry~dD~~dR~W~~d~-~~~~~~~~~~~~~i~--~~-~~~~~P~~V~~T 224 (351)
||+++|+. ...+.+|++++|+||||....+|||||.|||+|.+.. ...|..++++. .++ .. +.+.||.+||+|
T Consensus 161 lp~~ly~~~~~~~s~~L~~~~R~n~G~~~~~iryp~D~~dR~W~~~~~~~~~~~ist~~-~i~~~~~~~~~~~P~~V~~T 239 (347)
T PF12819_consen 161 LPDSLYPDTDANSSQALETVYRLNVGGSSSFIRYPDDTYDRIWQPYSSSPGWSNISTTS-NININSSNNPYDAPSAVYQT 239 (347)
T ss_pred CCccceeccccCCCceeEEEEeecCCCcccccCCCCCcceeeccccccCccccccccce-eeecccCCccCcChHHHHHh
Confidence 99999953 3456789999999999987336999999999999753 45677665543 354 22 689999999999
Q ss_pred hhccCCCcceEEEEecCCCCCCCEEEEEEeeeecccC-CCceEEEEEEECCeeccCCCcCccccceee-----EEEeeeC
Q 018717 225 AVVSASTSHIIILFTDLPAKPTPVYIATYFSEVLLLN-PTQKRSFQLCIDDKPISDPIIPPFASASEA-----YVTNRIA 298 (351)
Q Consensus 225 A~~~~~~s~~~~~~~~~~~~~~~y~v~lHFaEi~~~~-~~~~R~F~I~iNg~~~~~~~~p~y~~~~~~-----~~~~~~~ 298 (351)
|+++.+.+..++++|.+.+++..||||||||||+.+. ..++|+|+|||||+.+.+++.|.+.....+ +++.+..
T Consensus 240 A~~~~~~s~~~nltw~~~~~~~~y~v~lHFaEi~~~~~~~~~R~F~IyiN~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 319 (347)
T PF12819_consen 240 ARTPSNSSDPLNLTWSFVDPGFSYYVRLHFAEIQSLSPNNNQREFDIYINGQTAYSDVSPPYLGADTVPYYSDYVVNVPD 319 (347)
T ss_pred hhcccccccceEEEeccCCCCccEEEEEEEeecccccCCCCeEEEEEEECCeEccCccCcccccCcceEeecceEEEecC
Confidence 9999988767999999978899999999999999764 556899999999998866666655443222 4455555
Q ss_pred CCcEEEEEEecCCCCCCCceeeEEEEee
Q 018717 299 SASNSFSLRATSDSTLPPLVNAMEIYTV 326 (351)
Q Consensus 299 ~~~~~isl~~t~~S~lppiLNalEI~~v 326 (351)
++.++|+|+++++|+|||||||||||||
T Consensus 320 ~~~~~isL~~t~~S~lppiLNalEIy~v 347 (347)
T PF12819_consen 320 SGFLNISLGPTPDSTLPPILNALEIYKV 347 (347)
T ss_pred CCEEEEEEEeCCCCCcCceeEeeeeEeC
Confidence 6689999999999999999999999996
No 2
>PLN03150 hypothetical protein; Provisional
Probab=100.00 E-value=2.2e-69 Score=559.97 Aligned_cols=334 Identities=20% Similarity=0.290 Sum_probs=266.8
Q ss_pred CceEEEccCCCCCC-cCCCCCeeecCCCcccCCcceeccCCCCCCCcceeEeeeC--CCCCceEEEeecCCCeEEEEEEE
Q 018717 3 AVFLSIDCGSSESY-TDENGIEWTGDDAYIQNGDNKTVAYPSLVPYPMSTMRVFS--TRKKNCYSFKVDEGERVLVRASF 79 (351)
Q Consensus 3 ~~~i~IdCG~~~~~-~d~~g~~w~~D~~f~~~g~~~~v~~~~~~~~~y~t~R~F~--~~~~~cY~~~v~~g~~ylVRl~F 79 (351)
+++++||||+++++ +|.+||+|++|..|. .|.......+....++|+|+|+|| +|.++||+||+.++|+|||||||
T Consensus 23 ~~~~~I~CGs~~~~~~d~~~~~w~~D~~~~-~~~~~~~~~~~~~~~~~~t~R~F~~~~g~~~cY~~~~~~~g~ylVRl~F 101 (623)
T PLN03150 23 PFTMRISCGARVNVRTAPTNTLWYKDFAYT-GGIPANATRPSFIAPPLKTLRYFPLSDGPENCYNINRVPKGHYSVRVFF 101 (623)
T ss_pred CccEEEeCCCCCCcccCCCCCEEcCCcccc-cCccccccCcccccchhhccccCCcccccccceEeeecCCCcEEEEEEe
Confidence 57899999998776 567999999997664 333333333334567899999999 47789999999888899999999
Q ss_pred ecCCCCCCCCCCeEEEEeCCcEEEEEEeC--CCCcceeEEEEEEEeeCCcEEEEEEecCCCCCCeeEEEEEEEcCCcccc
Q 018717 80 YYGNYDRKNSPPVFDLQFDGNFWTTVNTS--LRSYDVLSYEAIYVVKRNFTSICVAQTKPGQLPFISAIEVRSLGINMYS 157 (351)
Q Consensus 80 ~ygnyd~~~~~~~Fdv~~~~~~~~tv~~~--~~~~~~~~~E~i~~~~~~~l~vcf~~~~~~s~pFIsaiEl~~l~~~~y~ 157 (351)
+|||||+.+.+|.|||++|++.|.++... .. ...++||+|++++++.++|||+|++. ++||||+|||||||+.+|.
T Consensus 102 ~~~~y~~~~~~~~Fdv~~~~~~~~tv~~~~~~~-~~~v~~E~i~~~~~~~l~vcf~~~~~-~~pFIs~iEv~~l~~~~y~ 179 (623)
T PLN03150 102 GLVAEPNFDSEPLFDVSVEGTQISSLKSGWSSH-DEQVFAEALVFLTDGSASICFHSTGH-GDPAILSIEILQVDDKAYN 179 (623)
T ss_pred ecCCcCCCCCCCceEEEECcEEEEEEecCcccC-CCcEEEEEEEEecCCcEEEEEecCCC-CCCceeEEEEEEcCccccc
Confidence 99999998888999999999999999752 22 25689999999999999999999875 6999999999999999996
Q ss_pred cc---CccceeeEEEeeecCcccc--cccCCCCCC--CceecCCCCC---Cceeecccceeeecc--CCCCCCchhhhhh
Q 018717 158 QV---PSNLALHLIQRAAMGANQT--IIRYPDDAY--DRTWNGAYGF---GLSEVASQALSINIT--TNNSPPTAVPKNA 225 (351)
Q Consensus 158 ~~---~~~~~l~~~~R~n~G~~~~--~~ry~dD~~--dR~W~~d~~~---~~~~~~~~~~~i~~~--~~~~~P~~V~~TA 225 (351)
.. +.+.+|++++|+||||... .+|||||++ ||+|.+|..+ .+..+++. ..|++. +++.+|..|||||
T Consensus 180 ~~~~~~~~~~L~~~~R~n~G~~~~~~~~d~~~D~~~~dR~W~~d~~~~~~~~~~~st~-~~I~~~~~~~~~~P~~VyqTA 258 (623)
T PLN03150 180 FGPSWGQGVILRTAKRLSCGAGKSKFDEDYSGDHWGGDRFWNRMQTFGSGSDQAISTE-NVIKKASNAPNFYPESLYQSA 258 (623)
T ss_pred ccccccCceEEEEEEEEEecCcccccccCCCCCcccCccccCcCcccCCCcccccccc-cccccccCCCccChHHHhhhh
Confidence 43 2356799999999999753 269999999 9999997552 24444433 245542 5788999999999
Q ss_pred hccCCCcceEEEEecCC-CCCCCEEEEEEeeeec-ccCCCceEEEEEEECCeeccCCC----------cCccccceeeEE
Q 018717 226 VVSASTSHIIILFTDLP-AKPTPVYIATYFSEVL-LLNPTQKRSFQLCIDDKPISDPI----------IPPFASASEAYV 293 (351)
Q Consensus 226 ~~~~~~s~~~~~~~~~~-~~~~~y~v~lHFaEi~-~~~~~~~R~F~I~iNg~~~~~~~----------~p~y~~~~~~~~ 293 (351)
+++.+.+. +++|.++ +++..|+|||||||++ .....++|+|+|||||+.+.+++ .|.+++ +.
T Consensus 259 ~~~~~~~~--~lty~~~v~~~~~Y~VrLhFaEi~~~~~~~~~R~F~V~ing~~~~~~~di~~~~g~~~~~~~~~----~~ 332 (623)
T PLN03150 259 LVSTDTQP--DLSYTMDVDPNRNYSVWLHFAEIDNSITAEGKRVFDVLINGDTAFKDVDIVKMSGERYTALVLN----KT 332 (623)
T ss_pred ccccCCCC--ceEEEeecCCCCCEEEEEEEEeccCccCCCceEEEEEEECCEEeecccChhhhcCCcccceEEE----eE
Confidence 99976443 4566666 5788999999999998 45577999999999998775532 222322 33
Q ss_pred EeeeCCCcEEEEEEecCCCCCCCceeeEEEEeeccCCCCCCChhhHHHHHhhhchhc
Q 018717 294 TNRIASASNSFSLRATSDSTLPPLVNAMEIYTVSNPLTNGTNVKDGEFHLASTCILR 350 (351)
Q Consensus 294 ~~~~~~~~~~isl~~t~~S~lppiLNalEI~~v~~~~~~~T~~~Dv~ai~~~~~~~~ 350 (351)
+... ++.++|+|.++.++ +|||||||||++.+ .+.+|.++|+.||+++|.+|.
T Consensus 333 v~~~-~g~l~isl~p~~~s--~pilNaiEI~~~~~-~~~~t~~~~~~aL~~~k~~~~ 385 (623)
T PLN03150 333 VAVS-GRTLTIVLQPKKGT--HAIINAIEVFEIIT-AESKTLLEEVSALQTLKSSLG 385 (623)
T ss_pred Eeec-CCeEEEEEeeCCCC--cceeeeeeeeeccc-cccccCchHHHHHHHHHHhcC
Confidence 3333 47889999987654 79999999999997 578999999999999998763
No 3
>PF11721 Malectin: Di-glucose binding within endoplasmic reticulum; InterPro: IPR021720 Malectin is a membrane-anchored protein of the endoplasmic reticulum that recognises and binds Glc2-N-glycan. It carries a signal peptide from residues 1-26, a C-terminal transmembrane helix from residues 255-274, and a highly conserved central part of approximately 190 residues followed by an acidic, glutamate-rich region. Carbohydrate-binding is mediated by the four aromatic residues, Y67, Y89, Y116, and F117 and the aspartate at D186. NMR-based ligand-screening studies has shown binding of the protein to maltose and related oligosaccharides, on the basis of which the protein has been designated "malectin", and its endogenous ligand is found to be Glc2-high-mannose N-glycan [. This entry represents a malectin domain, and can also be found in probable receptor-like serine/threonine-protein kinases from plants [] and in proteins described as glycoside hydrolases. ; PDB: 2KR2_A 2JWP_A 2K46_A.
Probab=99.40 E-value=8.4e-13 Score=116.19 Aligned_cols=136 Identities=22% Similarity=0.208 Sum_probs=79.4
Q ss_pred EEEccCCCCCCcCCCCCeeecCCCcccCCcce----------eccCCC----CCCCcceeEeeeCCCCCceEEEeecCCC
Q 018717 6 LSIDCGSSESYTDENGIEWTGDDAYIQNGDNK----------TVAYPS----LVPYPMSTMRVFSTRKKNCYSFKVDEGE 71 (351)
Q Consensus 6 i~IdCG~~~~~~d~~g~~w~~D~~f~~~g~~~----------~v~~~~----~~~~~y~t~R~F~~~~~~cY~~~v~~g~ 71 (351)
++||||+.. ++|..|..|.+|..|..++..- ...... ..+.+|+|.|.=+. ...|.||+.+.|
T Consensus 3 ~~IN~Gg~~-~~~~~g~~w~~D~~~~~g~~~y~~~~~~~~~~~~~~~~i~~t~d~~Lyqt~R~g~~--~f~Y~ip~~~~G 79 (174)
T PF11721_consen 3 LRINAGGPA-YTDSSGIVWEADQYYTGGSWGYYVSSDNNGSTSSTNSSIPGTTDDPLYQTERYGPS--SFSYDIPVVPNG 79 (174)
T ss_dssp EEEEETSSS-EEETTTEEE-SSSSSTTSS-----------SSTTS--TTS-HHHHHTTT-----SS--SEEEEEE--S-E
T ss_pred EEEECCCCc-ccCCCCCEEcCCCCCCCCCcccccccccccccccccccccCCCchhhhHhhcCCCC--ceEEEEecCCCc
Confidence 689999976 4778899999998664332200 000011 12468999999544 359999955445
Q ss_pred eEEEEEEEecCCCCC------CCCCCeEEEEeCCcE-EEEEEeC--C-CCcceeEEEE-EEEeeCCcEEEEEEe------
Q 018717 72 RVLVRASFYYGNYDR------KNSPPVFDLQFDGNF-WTTVNTS--L-RSYDVLSYEA-IYVVKRNFTSICVAQ------ 134 (351)
Q Consensus 72 ~ylVRl~F~ygnyd~------~~~~~~Fdv~~~~~~-~~tv~~~--~-~~~~~~~~E~-i~~~~~~~l~vcf~~------ 134 (351)
.|-|||||.-..+.. .++ +.|||++++.. ...+++. . ....++++++ -+.++++.|.|+|..
T Consensus 80 ~Y~V~L~FaE~~~~~~~~~~~~G~-RvFdV~v~g~~vl~~~Di~~~~G~~~~~~~~~~~~v~v~dg~L~i~f~~~~~~~~ 158 (174)
T PF11721_consen 80 TYTVRLHFAELYFGASGGASGPGQ-RVFDVYVNGETVLKNFDIYAEAGGFNKAAVRRFFNVTVTDGTLNIQFVWAGKGTL 158 (174)
T ss_dssp EEEEEEEEE-SSS--------SSS-S-EEEEETTEEEEEEE-HHHHHSSSS---EEEEEEEEEETTEEETTEEEE--SEE
T ss_pred EEEEEEEeccccccccccccCCCc-eEEEEEecceEEEeccCHHHHcCCCceEEEEEEEEEEEeCCcEEEEEEecCCCcE
Confidence 999999998333332 344 79999999964 4456652 1 1112577777 456799999999994
Q ss_pred -----cCCCCCCeeEEE
Q 018717 135 -----TKPGQLPFISAI 146 (351)
Q Consensus 135 -----~~~~s~pFIsai 146 (351)
... ..|.||||
T Consensus 159 ~i~~~~~~-~~p~IsaI 174 (174)
T PF11721_consen 159 CIPFIGSY-GNPLISAI 174 (174)
T ss_dssp EEEEESSS-SSSSEEEE
T ss_pred EeeccccC-CCcEEeeC
Confidence 212 36888887
No 4
>PF11721 Malectin: Di-glucose binding within endoplasmic reticulum; InterPro: IPR021720 Malectin is a membrane-anchored protein of the endoplasmic reticulum that recognises and binds Glc2-N-glycan. It carries a signal peptide from residues 1-26, a C-terminal transmembrane helix from residues 255-274, and a highly conserved central part of approximately 190 residues followed by an acidic, glutamate-rich region. Carbohydrate-binding is mediated by the four aromatic residues, Y67, Y89, Y116, and F117 and the aspartate at D186. NMR-based ligand-screening studies has shown binding of the protein to maltose and related oligosaccharides, on the basis of which the protein has been designated "malectin", and its endogenous ligand is found to be Glc2-high-mannose N-glycan [. This entry represents a malectin domain, and can also be found in probable receptor-like serine/threonine-protein kinases from plants [] and in proteins described as glycoside hydrolases. ; PDB: 2KR2_A 2JWP_A 2K46_A.
Probab=99.37 E-value=2.8e-13 Score=119.27 Aligned_cols=102 Identities=14% Similarity=0.219 Sum_probs=59.2
Q ss_pred EEeeecCcccccccCCCCCCCceecCCCCCC---ceeeccc--c---eeeeccCCCCCCchhhhhhhccCCCcceEEEEe
Q 018717 168 IQRAAMGANQTIIRYPDDAYDRTWNGAYGFG---LSEVASQ--A---LSINITTNNSPPTAVPKNAVVSASTSHIIILFT 239 (351)
Q Consensus 168 ~~R~n~G~~~~~~ry~dD~~dR~W~~d~~~~---~~~~~~~--~---~~i~~~~~~~~P~~V~~TA~~~~~~s~~~~~~~ 239 (351)
++|+||||... +|...+.|.+|..+. +...... . ...........+..+|||+|.... +|.|
T Consensus 2 ~~~IN~Gg~~~-----~~~~g~~w~~D~~~~~g~~~y~~~~~~~~~~~~~~~~i~~t~d~~Lyqt~R~g~~-----~f~Y 71 (174)
T PF11721_consen 2 VLRINAGGPAY-----TDSSGIVWEADQYYTGGSWGYYVSSDNNGSTSSTNSSIPGTTDDPLYQTERYGPS-----SFSY 71 (174)
T ss_dssp EEEEEETSSSE-----EETTTEEE-SSSSSTTSS-----------SSTTS--TTS-HHHHHTTT-----SS-----SEEE
T ss_pred EEEEECCCCcc-----cCCCCCEEcCCCCCCCCCcccccccccccccccccccccCCCchhhhHhhcCCCC-----ceEE
Confidence 68999999754 567899999986542 2111110 0 000001223456799999998533 3778
Q ss_pred cCC-CCCCCEEEEEEeeeecccCC------CceEEEEEEECCeeccCC
Q 018717 240 DLP-AKPTPVYIATYFSEVLLLNP------TQKRSFQLCIDDKPISDP 280 (351)
Q Consensus 240 ~~~-~~~~~y~v~lHFaEi~~~~~------~~~R~F~I~iNg~~~~~~ 280 (351)
.+| .++..|-|+|||||+.. .. .++|+|||+|||+.+.++
T Consensus 72 ~ip~~~~G~Y~V~L~FaE~~~-~~~~~~~~~G~RvFdV~v~g~~vl~~ 118 (174)
T PF11721_consen 72 DIPVVPNGTYTVRLHFAELYF-GASGGASGPGQRVFDVYVNGETVLKN 118 (174)
T ss_dssp EEE--S-EEEEEEEEEE-SSS---------SSSS-EEEEETTEEEEEE
T ss_pred EEecCCCcEEEEEEEeccccc-cccccccCCCceEEEEEecceEEEec
Confidence 888 66778999999999984 44 899999999999987653
No 5
>PLN03150 hypothetical protein; Provisional
Probab=99.35 E-value=8.5e-12 Score=130.21 Aligned_cols=147 Identities=20% Similarity=0.258 Sum_probs=99.7
Q ss_pred EEEccCCCCC-C-cCC----C--CCeeecCCCcccCCc-----ceecc----CCC-CCCCcceeEeeeCCC-CCceEEEe
Q 018717 6 LSIDCGSSES-Y-TDE----N--GIEWTGDDAYIQNGD-----NKTVA----YPS-LVPYPMSTMRVFSTR-KKNCYSFK 66 (351)
Q Consensus 6 i~IdCG~~~~-~-~d~----~--g~~w~~D~~f~~~g~-----~~~v~----~~~-~~~~~y~t~R~F~~~-~~~cY~~~ 66 (351)
.+|+||+... . .|. - .|.|.+|..|..... ...+. .++ .+...|+|||.+.+. ...+|.|+
T Consensus 194 ~R~n~G~~~~~~~~d~~~D~~~~dR~W~~d~~~~~~~~~~~st~~~I~~~~~~~~~~P~~VyqTA~~~~~~~~~lty~~~ 273 (623)
T PLN03150 194 KRLSCGAGKSKFDEDYSGDHWGGDRFWNRMQTFGSGSDQAISTENVIKKASNAPNFYPESLYQSALVSTDTQPDLSYTMD 273 (623)
T ss_pred EEEEecCcccccccCCCCCcccCccccCcCcccCCCcccccccccccccccCCCccChHHHhhhhccccCCCCceEEEee
Confidence 5899998531 1 221 2 699999987653311 11121 111 244589999998752 34699999
Q ss_pred ecCCCeEEEEEEEecCCC-CCCCCCCeEEEEeCCcEEE-EEEe---CCCCcceeEEEEEEEeeCCcEEEEEEecCCCCCC
Q 018717 67 VDEGERVLVRASFYYGNY-DRKNSPPVFDLQFDGNFWT-TVNT---SLRSYDVLSYEAIYVVKRNFTSICVAQTKPGQLP 141 (351)
Q Consensus 67 v~~g~~ylVRl~F~ygny-d~~~~~~~Fdv~~~~~~~~-tv~~---~~~~~~~~~~E~i~~~~~~~l~vcf~~~~~~s~p 141 (351)
+.+++.|+|||||+--.. ......+.|+|++++..+. .++. ......++++++.+.+.++.+.|+|+|.. ++.|
T Consensus 274 v~~~~~Y~VrLhFaEi~~~~~~~~~R~F~V~ing~~~~~~~di~~~~g~~~~~~~~~~~v~~~~g~l~isl~p~~-~s~p 352 (623)
T PLN03150 274 VDPNRNYSVWLHFAEIDNSITAEGKRVFDVLINGDTAFKDVDIVKMSGERYTALVLNKTVAVSGRTLTIVLQPKK-GTHA 352 (623)
T ss_pred cCCCCCEEEEEEEEeccCccCCCceEEEEEEECCEEeecccChhhhcCCcccceEEEeEEeecCCeEEEEEeeCC-CCcc
Confidence 988889999999993321 1111237899999997543 2332 11112578889988888889999999975 4579
Q ss_pred eeEEEEEEEcCC
Q 018717 142 FISAIEVRSLGI 153 (351)
Q Consensus 142 FIsaiEl~~l~~ 153 (351)
+||||||+.+..
T Consensus 353 ilNaiEI~~~~~ 364 (623)
T PLN03150 353 IINAIEVFEIIT 364 (623)
T ss_pred eeeeeeeeeccc
Confidence 999999998876
No 6
>PF12819 Malectin_like: Carbohydrate-binding protein of the ER; InterPro: IPR024788 Malectin is a membrane-anchored protein of the endoplasmic reticulum that recognises and binds Glc2-N-glycan []. This entry represents a malectin-like domain found in a number of plant receptor kinases.
Probab=98.93 E-value=7e-09 Score=101.01 Aligned_cols=145 Identities=20% Similarity=0.270 Sum_probs=90.8
Q ss_pred eEEEccCCCC---CCcCC-CCCeeecC---CCcccCCcceecc-C----CC-CCCCcceeEeeeCCCC---CceEEEeec
Q 018717 5 FLSIDCGSSE---SYTDE-NGIEWTGD---DAYIQNGDNKTVA-Y----PS-LVPYPMSTMRVFSTRK---KNCYSFKVD 68 (351)
Q Consensus 5 ~i~IdCG~~~---~~~d~-~g~~w~~D---~~f~~~g~~~~v~-~----~~-~~~~~y~t~R~F~~~~---~~cY~~~v~ 68 (351)
+.+++||+.. .|.|. -+|.|.+. .....-.....+. . +. .+...|+|||.-.... ...|.| +.
T Consensus 180 ~~R~n~G~~~~~iryp~D~~dR~W~~~~~~~~~~~ist~~~i~~~~~~~~~~~P~~V~~TA~~~~~~s~~~nltw~~-~~ 258 (347)
T PF12819_consen 180 VYRLNVGGSSSFIRYPDDTYDRIWQPYSSSPGWSNISTTSNININSSNNPYDAPSAVYQTARTPSNSSDPLNLTWSF-VD 258 (347)
T ss_pred EEeecCCCcccccCCCCCcceeeccccccCccccccccceeeecccCCccCcChHHHHHhhhcccccccceEEEecc-CC
Confidence 4689999864 34443 57999963 1111111111232 1 12 2556899999976543 345556 67
Q ss_pred CCCeEEEEEEEe-cCCC-CCCCCCCeEEEEeCCcEEE-EEEeC--CCCcceeEEEEEEEeeC-CcEEEEEEecCCCC-CC
Q 018717 69 EGERVLVRASFY-YGNY-DRKNSPPVFDLQFDGNFWT-TVNTS--LRSYDVLSYEAIYVVKR-NFTSICVAQTKPGQ-LP 141 (351)
Q Consensus 69 ~g~~ylVRl~F~-ygny-d~~~~~~~Fdv~~~~~~~~-tv~~~--~~~~~~~~~E~i~~~~~-~~l~vcf~~~~~~s-~p 141 (351)
++..|+|||||+ ...- .+.+ ...|+|++++..|. .+... .....++++.+++.+++ +.+.|+|.++.... -|
T Consensus 259 ~~~~y~v~lHFaEi~~~~~~~~-~R~F~IyiN~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~isL~~t~~S~lpp 337 (347)
T PF12819_consen 259 PGFSYYVRLHFAEIQSLSPNNN-QREFDIYINGQTAYSDVSPPYLGADTVPYYSDYVVNVPDSGFLNISLGPTPDSTLPP 337 (347)
T ss_pred CCccEEEEEEEeecccccCCCC-eEEEEEEECCeEccCccCcccccCcceEeecceEEEecCCCEEEEEEEeCCCCCcCc
Confidence 788999999999 2221 1222 37899999998875 33321 11113456778877654 57899999986311 59
Q ss_pred eeEEEEEEEc
Q 018717 142 FISAIEVRSL 151 (351)
Q Consensus 142 FIsaiEl~~l 151 (351)
+|||+||..|
T Consensus 338 iLNalEIy~v 347 (347)
T PF12819_consen 338 ILNALEIYKV 347 (347)
T ss_pred eeEeeeeEeC
Confidence 9999999864
No 7
>KOG3593 consensus Predicted receptor-like serine/threonine kinase [Signal transduction mechanisms]
Probab=69.62 E-value=2.2 Score=40.23 Aligned_cols=145 Identities=15% Similarity=0.189 Sum_probs=79.6
Q ss_pred eeEEEeeecCcccc----cccCCCCCCCceecCCCCCCceeecccceeeeccCCCCCCchhhhhhhccCCCcceEEEEec
Q 018717 165 LHLIQRAAMGANQT----IIRYPDDAYDRTWNGAYGFGLSEVASQALSINITTNNSPPTAVPKNAVVSASTSHIIILFTD 240 (351)
Q Consensus 165 l~~~~R~n~G~~~~----~~ry~dD~~dR~W~~d~~~~~~~~~~~~~~i~~~~~~~~P~~V~~TA~~~~~~s~~~~~~~~ 240 (351)
+..++-+||||+.. +++|.-|+.--.=. ....+.. ..|.- ....--...|||++-... .|.|.
T Consensus 58 ~svI~aVncGgdaavd~ygI~f~aD~~~~VGr-asd~G~~------l~i~~-raeeed~ily~ter~nee-----tFgyd 124 (355)
T KOG3593|consen 58 SSVIPAVNCGGDAAVDNYGIRFAADPLEGVGR-ASDYGMV------LGIGC-RAEEEDIILYQTERYNEE-----TFGYD 124 (355)
T ss_pred hhhhheeccCChhhhcccceEeeccccccccc-cCCccce------eeccc-cCChhhhhhhhhcccchh-----hhccc
Confidence 45678899999753 46775554321000 0011110 01110 112234568999986532 46688
Q ss_pred CC-CCCCCEEEEEEeeeecccCCCceEEEEEEEC-CeeccCC----------------CcCccccceeeEEEe--e--eC
Q 018717 241 LP-AKPTPVYIATYFSEVLLLNPTQKRSFQLCID-DKPISDP----------------IIPPFASASEAYVTN--R--IA 298 (351)
Q Consensus 241 ~~-~~~~~y~v~lHFaEi~~~~~~~~R~F~I~iN-g~~~~~~----------------~~p~y~~~~~~~~~~--~--~~ 298 (351)
+| +....|-+.|.|||.. .+..+..+|+|-+| +..+.++ +.|.-..-.. +.+. . ..
T Consensus 125 ~pik~dgdyalvlkfaevy-F~~~q~kvfdvrln~sh~vVk~ldi~~~vg~rg~AhDe~i~~~i~~gk-ls~~gess~~t 202 (355)
T KOG3593|consen 125 VPIKEDGDYALVLKFAEVY-FKTCQHKVFDVRLNCSHCVVKALDIFDQVGDRGKAHDEIIPCLIGQGK-LSVCGESSIST 202 (355)
T ss_pred ccccCCCceehhhhHHHHH-HHhhhhhheeeeeccceeEEeccchhhhcCCCcccccceEEEEEcCce-EEEEeeeEEee
Confidence 87 4445677899999976 47789999999999 5443321 1110000000 1111 1 12
Q ss_pred CCcEEEEEEecCCCCCCCceeeEEEEee
Q 018717 299 SASNSFSLRATSDSTLPPLVNAMEIYTV 326 (351)
Q Consensus 299 ~~~~~isl~~t~~S~lppiLNalEI~~v 326 (351)
.|+++|.+.+..- ..|++||.-|.+-
T Consensus 203 ~gkl~le~~kg~l--dnpk~~a~aIl~g 228 (355)
T KOG3593|consen 203 LGKLNLEFLKGVL--DNPKDCARAILVG 228 (355)
T ss_pred cceEEEEeecccC--CChhhhhHHHhhc
Confidence 3667777766532 2489998877754
No 8
>KOG3593 consensus Predicted receptor-like serine/threonine kinase [Signal transduction mechanisms]
Probab=66.84 E-value=2.2 Score=40.25 Aligned_cols=87 Identities=18% Similarity=0.286 Sum_probs=57.3
Q ss_pred EEEccCCCCCCcCCCCCeeecCCCcccCCcce------ecc--CCCCCCCcceeEeeeCCCCCceEEEeecCCCeEEEEE
Q 018717 6 LSIDCGSSESYTDENGIEWTGDDAYIQNGDNK------TVA--YPSLVPYPMSTMRVFSTRKKNCYSFKVDEGERVLVRA 77 (351)
Q Consensus 6 i~IdCG~~~~~~d~~g~~w~~D~~f~~~g~~~------~v~--~~~~~~~~y~t~R~F~~~~~~cY~~~v~~g~~ylVRl 77 (351)
.-++||+.. .+|..|+.|..|..- ..|... .+- ..-....+|+|+|+=.+.+ .|.+|++..|.|-+=+
T Consensus 62 ~aVncGgda-avd~ygI~f~aD~~~-~VGrasd~G~~l~i~~raeeed~ily~ter~neetF--gyd~pik~dgdyalvl 137 (355)
T KOG3593|consen 62 PAVNCGGDA-AVDNYGIRFAADPLE-GVGRASDYGMVLGIGCRAEEEDIILYQTERYNEETF--GYDVPIKEDGDYALVL 137 (355)
T ss_pred heeccCChh-hhcccceEeeccccc-cccccCCccceeeccccCChhhhhhhhhcccchhhh--cccccccCCCceehhh
Confidence 458999975 488889999999521 113221 111 1111235899999954444 7999998877998889
Q ss_pred EEe--cCCCCCCCCCCeEEEEeCC
Q 018717 78 SFY--YGNYDRKNSPPVFDLQFDG 99 (351)
Q Consensus 78 ~F~--ygnyd~~~~~~~Fdv~~~~ 99 (351)
-|. | |+.... -.||+.++-
T Consensus 138 kfaevy--F~~~q~-kvfdvrln~ 158 (355)
T KOG3593|consen 138 KFAEVY--FKTCQH-KVFDVRLNC 158 (355)
T ss_pred hHHHHH--HHhhhh-hheeeeecc
Confidence 997 5 443222 579999984
No 9
>KOG1263 consensus Multicopper oxidases [Secondary metabolites biosynthesis, transport and catabolism]
Probab=31.42 E-value=2.5e+02 Score=29.44 Aligned_cols=80 Identities=11% Similarity=0.062 Sum_probs=51.9
Q ss_pred EEEeecCCCeEEEEEEEecCCCCCCCCCCeEEEEeCCcEEEEEEeCCCCcceeEEEEEEEeeCCcEEEEEEecCCCCCCe
Q 018717 63 YSFKVDEGERVLVRASFYYGNYDRKNSPPVFDLQFDGNFWTTVNTSLRSYDVLSYEAIYVVKRNFTSICVAQTKPGQLPF 142 (351)
Q Consensus 63 Y~~~v~~g~~ylVRl~F~ygnyd~~~~~~~Fdv~~~~~~~~tv~~~~~~~~~~~~E~i~~~~~~~l~vcf~~~~~~s~pF 142 (351)
++|.+.+|..|++|+.=. +.+. ..| +.+++-.+.-|..+.....+...+.|....+...+||+.-...-+.=+
T Consensus 209 ~~l~v~pGktY~lRiiN~-----g~~~-~l~-F~I~~H~ltvVe~Dg~y~~p~~~~~l~i~~GQ~~~vLvtadq~~~~Y~ 281 (563)
T KOG1263|consen 209 PTLTVEPGKTYRLRIINA-----GLNT-SLN-FSIANHQLTVVEVDGAYTKPFTTDSLDIHPGQTYSVLLTADQSPGDYY 281 (563)
T ss_pred eEEEEcCCCEEEEEEEcc-----cccc-ceE-EEECCeEEEEEEecceEEeeeeeceEEEcCCcEEEEEEeCCCCCCcEE
Confidence 678899999999998633 2232 233 578887777777764433455567777778999999998543211226
Q ss_pred eEEEEEE
Q 018717 143 ISAIEVR 149 (351)
Q Consensus 143 IsaiEl~ 149 (351)
|.+.-.+
T Consensus 282 i~~~~~~ 288 (563)
T KOG1263|consen 282 IAASPYF 288 (563)
T ss_pred EEEEeee
Confidence 6554433
No 10
>PF08263 LRRNT_2: Leucine rich repeat N-terminal domain; InterPro: IPR013210 Leucine-rich repeats (LRR) consist of 2-45 motifs of 20-30 amino acids in length that generally folds into an arc or horseshoe shape []. LRRs occur in proteins ranging from viruses to eukaryotes, and appear to provide a structural framework for the formation of protein-protein interactions [, ].Proteins containing LRRs include tyrosine kinase receptors, cell-adhesion molecules, virulence factors, and extracellular matrix-binding glycoproteins, and are involved in a variety of biological processes, including signal transduction, cell adhesion, DNA repair, recombination, transcription, RNA processing, disease resistance, apoptosis, and the immune response []. Sequence analyses of LRR proteins suggested the existence of several different subfamilies of LRRs. The significance of this classification is that repeats from different subfamilies never occur simultaneously and have most probably evolved independently. It is, however, now clear that all major classes of LRR have curved horseshoe structures with a parallel beta sheet on the concave side and mostly helical elements on the convex side. At least six families of LRR proteins, characterised by different lengths and consensus sequences of the repeats, have been identified. Eleven-residue segments of the LRRs (LxxLxLxxN/CxL), corresponding to the beta-strand and adjacent loop regions, are conserved in LRR proteins, whereas the remaining parts of the repeats (herein termed variable) may be very different. Despite the differences, each of the variable parts contains two half-turns at both ends and a "linear" segment (as the chain follows a linear path overall), usually formed by a helix, in the middle. The concave face and the adjacent loops are the most common protein interaction surfaces on LRR proteins. 3D structure of some LRR proteins-ligand complexes show that the concave surface of LRR domain is ideal for interaction with alpha-helix, thus supporting earlier conclusions that the elongated and curved LRR structure provides an outstanding framework for achieving diverse protein-protein interactions []. Molecular modeling suggests that the conserved pattern LxxLxL, which is shorter than the previously proposed LxxLxLxxN/CxL is sufficient to impart the characteristic horseshoe curvature to proteins with 20- to 30-residue repeats []. This domain is often found at the N terminus of tandem leucine rich repeats.; PDB: 3RGZ_A 3RJ0_A 3RIZ_A 3RGX_A 1OGQ_A.
Probab=21.58 E-value=55 Score=21.21 Aligned_cols=15 Identities=27% Similarity=0.089 Sum_probs=13.2
Q ss_pred hhhHHHHHhhhchhc
Q 018717 336 VKDGEFHLASTCILR 350 (351)
Q Consensus 336 ~~Dv~ai~~~~~~~~ 350 (351)
++|+.|+|+.|.+|.
T Consensus 2 ~~d~~aLl~~k~~l~ 16 (43)
T PF08263_consen 2 NQDRQALLAFKKSLN 16 (43)
T ss_dssp HHHHHHHHHHHHCTT
T ss_pred cHHHHHHHHHHHhcc
Confidence 579999999999885
No 11
>PLN02792 oxidoreductase
Probab=20.64 E-value=6.7e+02 Score=26.10 Aligned_cols=67 Identities=16% Similarity=0.153 Sum_probs=42.3
Q ss_pred ceEEEeecCCCeEEEEEEEecCCCCCCCCCCeEEEEeCCcEEEEEEeCCCCcceeEEEEEEEeeCCcEEEEEEe
Q 018717 61 NCYSFKVDEGERVLVRASFYYGNYDRKNSPPVFDLQFDGNFWTTVNTSLRSYDVLSYEAIYVVKRNFTSICVAQ 134 (351)
Q Consensus 61 ~cY~~~v~~g~~ylVRl~F~ygnyd~~~~~~~Fdv~~~~~~~~tv~~~~~~~~~~~~E~i~~~~~~~l~vcf~~ 134 (351)
.|+.|.+.+|.+|.+|+-=. +.. ..|.+++++-...-|..+...-.+...+.+..+.++..+|-+.-
T Consensus 191 ~~~~~~v~~Gk~yRlRliNa-----~~~--~~~~f~i~gH~~tVI~~DG~~v~p~~~~~l~i~~GqRydVlV~a 257 (536)
T PLN02792 191 YVYSITVDKGKTYRFRISNV-----GLQ--TSLNFEILGHQLKLIEVEGTHTVQSMYTSLDIHVGQTYSVLVTM 257 (536)
T ss_pred CcceEEECCCCEEEEEEEEc-----CCC--ceEEEEECCcEEEEEEeCCccCCCcceeEEEEccCceEEEEEEc
Confidence 47789999999998886522 112 57888888755434444322112334466667778888876663
No 12
>PRK06764 hypothetical protein; Provisional
Probab=20.31 E-value=1.1e+02 Score=23.65 Aligned_cols=20 Identities=15% Similarity=0.333 Sum_probs=16.4
Q ss_pred ceEEEeecCCCeEEEEEEEe
Q 018717 61 NCYSFKVDEGERVLVRASFY 80 (351)
Q Consensus 61 ~cY~~~v~~g~~ylVRl~F~ 80 (351)
|.|++...+.|+|.||..=+
T Consensus 74 nkyti~f~kpg~yvirvngc 93 (105)
T PRK06764 74 NKYTIRFSKPGKYVIRVNGC 93 (105)
T ss_pred eeeEEEecCCccEEEEEccE
Confidence 78999887777999998654
Done!