BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 018721
(351 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q6NYE7|TM192_DANRE Transmembrane protein 192 OS=Danio rerio GN=tmem192 PE=2 SV=1
Length = 271
Score = 52.4 bits (124), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 51/170 (30%), Positives = 79/170 (46%), Gaps = 20/170 (11%)
Query: 79 VILLALTGIFQQYFVYQ--VQK----IRLQGYYSFSQKLKHIVRLPFAITAYGTAAMLLV 132
V+LL ++ F+Y VQ+ +R +GY F + K I LP I + G AA+L V
Sbjct: 99 VVLLGKVALWVVVFIYDRVVQRRHSAVRRKGYLDFYRMTKGIKSLPLLIHSAGNAAILTV 158
Query: 133 I----VWRPHISILSISTLLRII---MLIEAICAASFMSVYIGYVHQYNSLNSQPDVMKS 185
I + ++ LS+ LL II +L+ IC + Y +V ++N PDV +
Sbjct: 159 IAPSSLLDANVKNLSVYLLLAIICLELLLTIIC----LLRYTVHVVKFNRKKPHPDVTEE 214
Query: 186 LYSPLQPSSSLEGLRYHDGGRLSD---EQMALLQYQRENLHFLSEEILRL 232
S S + + DG L D +Q L+ Y +++ LS IL L
Sbjct: 215 ERSYGCSSDAHTETGFRDGSSLEDVVEKQADLIDYLKQHNSVLSRRILTL 264
>sp|Q5U1Y0|TM192_RAT Transmembrane protein 192 OS=Rattus norvegicus GN=Tmem192 PE=2 SV=1
Length = 266
Score = 52.0 bits (123), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 59/109 (54%), Gaps = 4/109 (3%)
Query: 79 VILLALTGIFQQYFVYQVQKIRLQGYYSFSQKLKHIVRLPFAITAYGTAAMLLVIVWR-- 136
VIL L +F++Y Y +K+R +GY + +H+ L I + G A+LL++ +
Sbjct: 101 VILWILHLLFERYIQYHHRKVRSRGYSQIYRSTRHLKALALTIHSSGNTALLLLLCVQYS 160
Query: 137 -PHISILSISTLLRIIMLIEAICAASFMSVYIGYVHQYNSLNSQPDVMK 184
P + L + +L ++ L E IC+ S + +Y + ++N QPDV++
Sbjct: 161 FPEPNKLYLELILAVLAL-ELICSLSCLVLYTVKIRRFNKAKPQPDVLE 208
>sp|Q9CXT7|TM192_MOUSE Transmembrane protein 192 OS=Mus musculus GN=Tmem192 PE=1 SV=1
Length = 266
Score = 51.2 bits (121), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 82/160 (51%), Gaps = 7/160 (4%)
Query: 79 VILLALTGIFQQYFVYQVQKIRLQGYYSFSQKLKHIVRLPFAITAYGTAAMLLVIVWR-- 136
+IL L +F++Y Y +K+R +GY + +H+ L I + G A+LL++ +
Sbjct: 101 LILWILHLLFERYVQYHHRKVRSRGYSQIYRSTRHLKTLALTIHSSGNTALLLLLCVQHS 160
Query: 137 -PHISILSISTLLRIIMLIEAICAASFMSVYIGYVHQYNSLNSQPDVM--KSLYSPLQPS 193
P S L + +L ++ L E IC+ S + +YI + ++N PDV+ + +Y+ +
Sbjct: 161 FPEPSKLYLELILAVLAL-ELICSLSCLILYIVKIRRFNRAKPLPDVLEEEKIYAYPSNT 219
Query: 194 SSLEGLRYHDG-GRLSDEQMALLQYQRENLHFLSEEILRL 232
+S G R + ++Q ++ Y + + LS+ +L L
Sbjct: 220 ASETGFRTVSSLEEIVEKQEDIIVYLKRHNALLSKRLLEL 259
>sp|O93308|SMC1A_XENLA Structural maintenance of chromosomes protein 1A OS=Xenopus laevis
GN=smc1a PE=1 SV=1
Length = 1232
Score = 35.0 bits (79), Expect = 0.90, Method: Composition-based stats.
Identities = 35/149 (23%), Positives = 68/149 (45%), Gaps = 15/149 (10%)
Query: 191 QPSSSLEGLRYHDGGRLSDEQMALLQYQRENLHFLSEEILRLQECLSKYEQSDDGSTPQV 250
Q S GL+ RL Q L Q + +L +E +L+ L+ + +P++
Sbjct: 700 QVQSQAHGLQM----RLKYSQSDLEQTKTRHLAMNMQEKSKLESELANF-------SPRI 748
Query: 251 -DLAHLLAARDQELRTLSAEMNQLQSEL--RLARSFVLR-VRNTNNQYVEENERLRAILG 306
D+ ++ +RD+E++ L +MNQ++ E+ R +R +R + V+ +
Sbjct: 749 NDIKRIIQSRDREMKDLKEKMNQVEDEVFEEFCREIGVRNIREFEEEKVKRQNEIAKKRL 808
Query: 307 EWSTRAAKLERALEVERMSNIELQKKIST 335
E+ + +L L+ E+ E Q K+ T
Sbjct: 809 EFENQKTRLGIQLDYEKNQLKEDQGKVQT 837
>sp|P47460|HMW2_MYCGE Cytadherence high molecular weight protein 2 OS=Mycoplasma genitalium
(strain ATCC 33530 / G-37 / NCTC 10195) GN=hmw2 PE=3 SV=1
Length = 1805
Score = 34.7 bits (78), Expect = 1.0, Method: Composition-based stats.
Identities = 33/139 (23%), Positives = 60/139 (43%), Gaps = 31/139 (22%)
Query: 206 RLSDEQMALLQYQRENLHFLSEEILR----LQECLSKYEQSDDGSTPQVDLAHLLAARDQ 261
R+ D++ LL+ NLHFLS E R L++ +S +E+ +T + +H +
Sbjct: 1301 RIVDDKNRLLKENERNLHFLSNETERKRAVLEDQISYFEKQRKQATDAILASH------K 1354
Query: 262 ELRTLSAEMNQLQSELRLARSFVLRVRNTNNQYVEENERLRAILGEWSTRAAKLERALEV 321
E++ E+ +L EL R NN + + ++ E
Sbjct: 1355 EVKKKEGELQKLLVELE------TRKTKLNNDF---------------AKFSRQREEFEN 1393
Query: 322 ERMSNIELQKKISTRRNQH 340
+R+ +ELQK + T+ N +
Sbjct: 1394 QRLKLLELQKTLQTQTNSN 1412
>sp|P0C2Y1|NBPF7_HUMAN Putative neuroblastoma breakpoint family member 7 OS=Homo sapiens
GN=NBPF7 PE=5 SV=1
Length = 421
Score = 34.3 bits (77), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 38/75 (50%)
Query: 272 QLQSELRLARSFVLRVRNTNNQYVEENERLRAILGEWSTRAAKLERALEVERMSNIELQK 331
QL RLAR V ++ N+ +EN++ + + + A + E+ E + + L++
Sbjct: 167 QLAEGCRLARHLVHKLSPENDTDEDENDKTKELDKVQESPAPREEQKAEEKEVPEDSLEE 226
Query: 332 KISTRRNQHGPAESN 346
T N HGP++SN
Sbjct: 227 CAITYSNSHGPSDSN 241
>sp|Q5RCG1|TM192_PONAB Transmembrane protein 192 OS=Pongo abelii GN=TMEM192 PE=2 SV=2
Length = 271
Score = 34.3 bits (77), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 41/173 (23%), Positives = 74/173 (42%), Gaps = 8/173 (4%)
Query: 79 VILLALTGIFQQYFVYQVQKIRLQGYYSFSQKLKHIVRLPFAITAYGTAAMLLVIVWR-- 136
VIL L + + Y Y KIR +GY + +H+ RL I + G +LL++ +
Sbjct: 101 VILWILHLLLECYIQYHHSKIRNRGYNLIYRSTRHLKRLALMIRSSGNTVLLLILCMQHS 160
Query: 137 -PHISILSISTLLRIIMLIEAICAASFMSVYIGYVHQYNSLNSQPDVMKSLYSPLQPSSS 195
P L L+ I+ +E IC+ + +Y + ++N +PD+++ PS+
Sbjct: 161 FPEPGRLY-LDLILAILALELICSLICLLIYTVKIRRFNKAKPEPDILEEEKIYAYPSN- 218
Query: 196 LEGLRYHDGGRLSDEQMALLQYQRENLHFLSEEILRLQECLSKYEQSDDGSTP 248
+ G R +++ Q + + +L L + L SD G P
Sbjct: 219 ---ITSETGFRTISSLEEIVEKQGDTIEYLKRHNALLSKRLLALTSSDLGCQP 268
>sp|Q8IY95|TM192_HUMAN Transmembrane protein 192 OS=Homo sapiens GN=TMEM192 PE=1 SV=1
Length = 271
Score = 34.3 bits (77), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 41/173 (23%), Positives = 74/173 (42%), Gaps = 8/173 (4%)
Query: 79 VILLALTGIFQQYFVYQVQKIRLQGYYSFSQKLKHIVRLPFAITAYGTAAMLLVIVWR-- 136
VIL L + + Y Y KIR +GY + +H+ RL I + G +LL++ +
Sbjct: 101 VILWILHLLLECYIQYHHSKIRNRGYNLIYRSTRHLKRLALMIQSSGNTVLLLILCMQHS 160
Query: 137 -PHISILSISTLLRIIMLIEAICAASFMSVYIGYVHQYNSLNSQPDVMKSLYSPLQPSSS 195
P L L+ I+ +E IC+ + +Y + ++N +PD+++ PS+
Sbjct: 161 FPEPGRL-YLDLILAILALELICSLICLLIYTVKIRRFNKAKPEPDILEEEKIYAYPSN- 218
Query: 196 LEGLRYHDGGRLSDEQMALLQYQRENLHFLSEEILRLQECLSKYEQSDDGSTP 248
+ G R +++ Q + + +L L + L SD G P
Sbjct: 219 ---ITSETGFRTISSLEEIVEKQGDTIEYLKRHNALLSKRLLALTSSDLGCQP 268
>sp|P48016|ATH1_YEAST Vacuolar acid trehalase OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=ATH1 PE=1 SV=1
Length = 1211
Score = 33.9 bits (76), Expect = 1.8, Method: Composition-based stats.
Identities = 31/125 (24%), Positives = 57/125 (45%), Gaps = 15/125 (12%)
Query: 189 PLQPSSSLEGLRYHDGGRLSDEQMALLQYQRENLHFLSEEILRLQECLSKYEQSDDGSTP 248
P++ +G+ D L D Q ALL +++E+L L E+I RL K+ + D
Sbjct: 1077 PVENVIDFDGIEQEDDESLDDVQ-ALLHWKKEDLAKLIEQIPRLNFLKRKFVKILDNVPV 1135
Query: 249 QVDLAHLLAARDQEL--------RTLSAEMNQLQ------SELRLARSFVLRVRNTNNQY 294
+ A+R+Q L T + + ++LQ ++ R R V+ V+ + Y
Sbjct: 1136 SPSEPYYEASRNQSLIEILPSNRTTFTIDYDKLQVGDKGNTDWRKTRYIVVAVQGVYDDY 1195
Query: 295 VEENE 299
++N+
Sbjct: 1196 DDDNK 1200
>sp|Q876Q0|ACRB_EMENI Ubiquitination network signaling protein acrB OS=Emericella
nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 /
NRRL 194 / M139) GN=acrB PE=3 SV=1
Length = 1015
Score = 33.9 bits (76), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 50/205 (24%), Positives = 86/205 (41%), Gaps = 34/205 (16%)
Query: 132 VIVWRPHISILSISTLLRIIMLI----EAICAASFMSVYIGYVHQYNSLNSQPDVMKSLY 187
I WR IS L+ + + E ICA MSV + NS P + Y
Sbjct: 533 TIYWRGEISGLAPNCAYTCSFVKCDTDEEICA---MSVKTPAANDAEQANSVPAPPQPSY 589
Query: 188 SPLQPSSSLEGLRYHDGGRLSDEQMALLQYQRENLHFLSEEILRLQECLSKYEQSDDGST 247
P P+++L+ + +L++++ L + + N H L+ I ++++ L Y
Sbjct: 590 RPSSPTTTLKNSIINAEAKLNEKRARLRKAK--NDHKLA--ISKIKKELDNYTN------ 639
Query: 248 PQVDLAHLLAARD---QELRTLSAEMNQLQSELRLARSFVLRVRNTNNQYVEENERLRAI 304
L + D Q+ R+L E N Q+E A + ++ N N +E +
Sbjct: 640 ------RLQSGTDENRQKQRSLQLERNIRQTEEATA-ALDNQIDNLGNVPDDEYQ----- 687
Query: 305 LGEWSTRAAKLERALEVERMSNIEL 329
EW + AK ER LE+ + + E+
Sbjct: 688 --EWVEQKAKYERELELLKSAKAEI 710
>sp|O34824|GLMM_BACSU Phosphoglucosamine mutase OS=Bacillus subtilis (strain 168) GN=glmM
PE=1 SV=1
Length = 448
Score = 33.5 bits (75), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 35/69 (50%), Gaps = 7/69 (10%)
Query: 239 YEQSDDGSTPQVDLAHLLAARDQELRTLSAEMNQLQSELRLARSFVLRVRNTNNQYVEEN 298
Y + DG + L + L A + L L+AEM + ++ VR T+ VEEN
Sbjct: 335 YNTTGDGLLSAIMLMNTLKATGKPLSELAAEMQKFPQ-------LLVNVRVTDKYKVEEN 387
Query: 299 ERLRAILGE 307
E+++A++ E
Sbjct: 388 EKVKAVISE 396
>sp|P0CD63|Y5729_DICDI J domain-containing protein DDB_G0295729 OS=Dictyostelium
discoideum GN=DDB_G0295729 PE=4 SV=1
Length = 1346
Score = 32.7 bits (73), Expect = 3.8, Method: Composition-based stats.
Identities = 32/112 (28%), Positives = 50/112 (44%), Gaps = 9/112 (8%)
Query: 237 SKYEQSDDGSTPQVDLAHLLAARDQELRTLSAEMNQLQSELRLA--RSFVLRVRNTNNQY 294
S+Y S D + +D+A + A + L+ +S E ++E + + +R +
Sbjct: 564 SQYSSSSDIAH-DIDIA-MANAEKEALKRVSDEALAREAERNPVNHQKIIEAMRREQEKL 621
Query: 295 VEENERLRAILGEWSTRAAKLERALEVERMSNIELQKKISTRRNQHGPAESN 346
EE ERL+ TR ER LE ER IE QK+I ++ E N
Sbjct: 622 KEEIERLKEF-----TRQRDFERQLEFERQKEIEHQKEIERQKEIERLKEEN 668
>sp|O97961|KTN1_VULVU Kinectin OS=Vulpes vulpes GN=KTN1 PE=2 SV=1
Length = 1330
Score = 32.3 bits (72), Expect = 5.2, Method: Composition-based stats.
Identities = 34/123 (27%), Positives = 58/123 (47%), Gaps = 12/123 (9%)
Query: 207 LSDEQMALLQYQRENLHFLSEEILRLQECLSKYEQSDDGSTPQVDLAHLLAARDQELRTL 266
LS + L + Q EN F SE I +L++C Y+Q+ P +L +++ R++E+ L
Sbjct: 956 LSSKIKLLQEVQDENKLFKSE-IEQLKQC--NYQQASS-FPPHEELLKVISEREKEITGL 1011
Query: 267 SAEMNQLQSELRLARSFVLRVRNTNNQYVEEN-ERLRAILGEWSTRAAKLERALEVERMS 325
E++ L+ V R NN E+N E + A+ K+ + +VER
Sbjct: 1012 QNELDSLKEA-------VEHQRKKNNDLREKNWEAMEALASTEKMLQDKVNKTSKVERQQ 1064
Query: 326 NIE 328
+E
Sbjct: 1065 YVE 1067
>sp|Q8MJV1|MYH2_HORSE Myosin-2 OS=Equus caballus GN=MYH2 PE=2 SV=1
Length = 1937
Score = 32.0 bits (71), Expect = 6.8, Method: Composition-based stats.
Identities = 33/132 (25%), Positives = 59/132 (44%), Gaps = 16/132 (12%)
Query: 205 GRLSDEQMALLQYQRENLHFLSEE---ILRLQECLSKYEQSDDGSTPQVDLAHLLAARDQ 261
+L+ E+ AL + ++ L L E + L + +K EQ D DL L +
Sbjct: 992 AKLTKEKKALQEAHQQTLDDLQAEEDKVNTLTKAKTKLEQQVD------DLEGSLEQEKK 1045
Query: 262 ELRTLSAEMNQLQSELRLARSFVLRVRNTNNQYVEENERLRAILGEWSTRAAKLERALEV 321
L +L+ +L+LA+ ++ + N Q E+ ++ +G L+ +E
Sbjct: 1046 LRMDLERAKRKLEGDLKLAQESIMDIENEKQQLDEKLKKKEFEIG-------NLQSKIED 1098
Query: 322 ERMSNIELQKKI 333
E+ I+LQKKI
Sbjct: 1099 EQALGIQLQKKI 1110
>sp|C5E2E7|MPS2_LACTC Monopolar spindle protein 2 OS=Lachancea thermotolerans (strain
ATCC 56472 / CBS 6340 / NRRL Y-8284) GN=MPS2 PE=3 SV=1
Length = 386
Score = 32.0 bits (71), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 50/99 (50%), Gaps = 16/99 (16%)
Query: 206 RLSDEQ-MALLQYQRENLHFLSEEILRLQECL----SKYEQSDDGSTPQVDLAHLLAARD 260
RL D Q + +Q ++ + H L EE++RL+E + SK ++ D T + ++ L +D
Sbjct: 107 RLQDSQAVDGIQDEKTSSHALQEEVMRLREQVRVLSSKNDEKDREITARDEIIADLQGKD 166
Query: 261 ----------QELRTLSAEMNQLQSELRLARSFVLRVRN 289
Q +RTL A + L+ EL R V+R ++
Sbjct: 167 ASPAGSPRSLQRMRTLQARVTSLEDELSF-RDEVIREKD 204
>sp|Q9BE41|MYH2_BOVIN Myosin-2 OS=Bos taurus GN=MYH2 PE=2 SV=1
Length = 1940
Score = 32.0 bits (71), Expect = 8.0, Method: Composition-based stats.
Identities = 35/132 (26%), Positives = 60/132 (45%), Gaps = 16/132 (12%)
Query: 205 GRLSDEQMALLQYQRENLHFLSEE---ILRLQECLSKYEQSDDGSTPQVDLAHLLAARDQ 261
+L+ E+ AL + ++ L L E + L + +K EQ D DL L +
Sbjct: 995 AKLTKEKKALQEAHQQTLDDLQAEEDKVNTLTKAKTKLEQQVD------DLEGSLEQEKK 1048
Query: 262 ELRTLSAEMNQLQSELRLARSFVLRVRNTNNQYVEENERLRAILGEWSTRAAKLERALEV 321
L +L+ +L+LA+ ++ + N Q +E+L+ E S +K+E
Sbjct: 1049 LRMDLERAKRKLEGDLKLAQESIMDIENEKQQL---DEKLKKKEFEISNLQSKIED---- 1101
Query: 322 ERMSNIELQKKI 333
E+ I+LQKKI
Sbjct: 1102 EQALGIQLQKKI 1113
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.321 0.134 0.385
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 119,288,560
Number of Sequences: 539616
Number of extensions: 4492245
Number of successful extensions: 14572
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 196
Number of HSP's that attempted gapping in prelim test: 14396
Number of HSP's gapped (non-prelim): 416
length of query: 351
length of database: 191,569,459
effective HSP length: 118
effective length of query: 233
effective length of database: 127,894,771
effective search space: 29799481643
effective search space used: 29799481643
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 62 (28.5 bits)