Query 018722
Match_columns 351
No_of_seqs 79 out of 81
Neff 3.0
Searched_HMMs 29240
Date Mon Mar 25 05:03:17 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/018722.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/018722hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1fs1_A SKP2 F-BOX, cyclin A/CD 99.0 2.5E-10 8.5E-15 80.2 4.3 49 88-136 4-52 (53)
2 2ovr_B FBW7, F-BOX/WD repeat p 98.2 7.9E-07 2.7E-11 79.8 5.1 50 91-140 17-66 (445)
3 3l2o_B F-box only protein 4; s 98.2 8.9E-07 3E-11 85.0 4.8 54 92-145 4-60 (312)
4 1p22_A F-BOX/WD-repeat protein 98.2 1.1E-06 3.9E-11 79.0 4.4 51 92-142 10-64 (435)
5 3v7d_B Cell division control p 98.1 3.3E-06 1.1E-10 75.5 5.0 49 92-140 14-63 (464)
6 2e31_A FBS1, F-box only protei 98.0 4.1E-06 1.4E-10 79.2 5.1 50 91-140 49-99 (297)
7 2ast_B S-phase kinase-associat 97.5 3.6E-05 1.2E-09 67.3 2.2 49 87-135 3-51 (336)
8 3h8z_A FragIle X mental retard 96.8 0.001 3.5E-08 56.7 4.2 64 252-328 26-89 (128)
9 2p1m_B Transport inhibitor res 95.2 0.011 3.9E-07 55.3 3.6 34 93-126 6-40 (594)
10 3ogk_B Coronatine-insensitive 94.4 0.018 6.3E-07 54.0 2.9 36 91-126 11-47 (592)
11 2lkt_A Retinoic acid receptor 83.4 0.58 2E-05 37.9 2.4 13 297-309 5-17 (125)
12 4hfx_A Transcription elongatio 78.6 0.72 2.5E-05 37.8 1.4 58 94-154 11-68 (97)
13 1k1z_A VAV; SH3, proto-oncogen 73.1 2.9 0.0001 30.6 3.4 22 300-324 37-58 (78)
14 2lj0_A Sorbin and SH3 domain-c 72.1 1.6 5.4E-05 32.2 1.7 23 299-325 24-46 (65)
15 2kgt_A Tyrosine-protein kinase 71.6 1.4 4.9E-05 31.6 1.3 21 300-325 29-49 (72)
16 2bzy_A CRK-like protein, CRKL 71.4 1.9 6.5E-05 30.8 1.9 22 299-324 21-42 (67)
17 3rnj_A Brain-specific angiogen 71.2 1.4 4.6E-05 31.4 1.1 23 299-324 26-48 (67)
18 1y0m_A 1-phosphatidylinositol- 70.3 2 6.9E-05 29.9 1.9 23 299-325 21-43 (61)
19 1jo8_A ABP1P, actin binding pr 68.4 2.4 8.1E-05 29.3 1.9 24 299-326 18-41 (58)
20 1tg0_A BBC1 protein, myosin ta 68.3 2.4 8.3E-05 30.2 1.9 24 299-326 25-48 (68)
21 1ruw_A Myosin-3 isoform, MYO3; 67.1 2.6 8.9E-05 30.1 1.9 24 299-326 21-44 (69)
22 2eyx_A V-CRK sarcoma virus CT1 66.8 2.2 7.6E-05 30.5 1.5 22 299-324 26-47 (67)
23 1gcq_C VAV proto-oncogene; SH3 66.1 2.9 9.8E-05 29.8 2.0 21 300-323 29-49 (70)
24 2bz8_A SH3-domain kinase bindi 65.9 2.8 9.5E-05 28.9 1.8 23 299-325 19-41 (58)
25 2o9s_A Ponsin; SH3 domain, sig 65.3 2.9 9.8E-05 29.7 1.8 24 299-326 24-47 (67)
26 2lx7_A GAS-7, growth arrest-sp 64.9 1.9 6.6E-05 31.4 0.8 23 299-325 22-44 (60)
27 2j05_A RAS GTPase-activating p 64.6 3.1 0.00011 29.4 1.9 22 299-324 24-45 (65)
28 2g6f_X RHO guanine nucleotide 64.2 3.3 0.00011 28.7 1.9 22 299-324 22-43 (59)
29 2iim_A Proto-oncogene tyrosine 64.0 3.1 0.0001 29.1 1.7 20 300-324 25-44 (62)
30 2ak5_A RHO guanine nucleotide 63.8 3.2 0.00011 29.1 1.8 22 299-324 24-45 (64)
31 2csi_A RIM-BP2, RIM binding pr 62.9 3.2 0.00011 30.4 1.7 24 299-325 32-55 (76)
32 2j6f_A CD2-associated protein; 62.8 3.6 0.00012 28.8 1.9 24 299-325 19-42 (62)
33 2gnc_A SLIT-ROBO RHO GTPase-ac 62.5 3.3 0.00011 28.8 1.7 23 299-325 24-46 (60)
34 2dbk_A CRK-like protein; struc 62.2 3.3 0.00011 31.2 1.8 22 299-324 36-57 (88)
35 2dl3_A Sorbin and SH3 domain-c 62.2 3.5 0.00012 29.2 1.8 22 299-324 25-46 (68)
36 2oi3_A Tyrosine-protein kinase 62.2 3.8 0.00013 30.3 2.0 22 299-325 43-64 (86)
37 2ekh_A SH3 and PX domain-conta 62.1 3.6 0.00012 30.5 1.9 23 299-325 26-48 (80)
38 1zuy_A Myosin-5 isoform; SH3 d 62.0 3.8 0.00013 28.0 1.9 24 299-326 19-42 (58)
39 1sem_A SEM-5; SRC-homology 3 ( 61.3 3.9 0.00013 28.0 1.8 23 299-325 20-42 (58)
40 1k4u_S Phagocyte NADPH oxidase 61.2 4 0.00014 28.5 1.9 22 299-324 23-44 (62)
41 2i0n_A Class VII unconventiona 61.1 3.4 0.00012 30.6 1.6 23 299-324 28-50 (80)
42 2dl8_A SLIT-ROBO RHO GTPase-ac 60.6 3.6 0.00012 29.7 1.7 23 299-325 27-49 (72)
43 1uti_A GRB2-related adaptor pr 60.2 4.2 0.00014 27.9 1.9 23 299-325 19-41 (58)
44 1uj0_A Signal transducing adap 60.2 4.1 0.00014 28.5 1.9 23 299-325 23-45 (62)
45 4f14_A Nebulette; SH3 domain, 59.8 4.5 0.00015 28.0 1.9 23 299-325 24-46 (64)
46 1w70_A Neutrophil cytosol fact 59.7 4.5 0.00015 28.1 1.9 23 299-325 22-44 (60)
47 3ulr_B SRC substrate cortactin 59.6 4 0.00014 28.5 1.7 22 299-324 27-48 (65)
48 2jw4_A Cytoplasmic protein NCK 59.5 4.5 0.00015 29.3 2.0 21 299-324 25-45 (72)
49 2lcs_A NAP1-binding protein 2; 59.5 4.2 0.00014 29.9 1.9 23 299-325 23-45 (73)
50 2ew3_A SH3-containing GRB2-lik 59.1 4.5 0.00015 29.3 1.9 23 299-325 21-43 (68)
51 2ke9_A Caskin-2; SH3 domain, A 59.1 3 0.0001 31.6 1.0 24 299-326 37-60 (83)
52 1b07_A Protein (proto-oncogene 58.6 4.5 0.00015 29.0 1.8 22 299-324 21-42 (65)
53 1j3t_A Intersectin 2; beta bar 58.4 4.4 0.00015 29.4 1.8 22 299-325 28-49 (74)
54 1zx6_A YPR154WP; SH3 domain, p 58.2 5 0.00017 27.6 1.9 23 299-325 20-42 (58)
55 2eqi_A Phospholipase C, gamma 58.1 2.5 8.7E-05 30.1 0.4 24 299-326 25-48 (69)
56 2fpe_A C-JUN-amino-terminal ki 57.8 4.9 0.00017 28.0 1.9 22 299-324 21-42 (62)
57 2yun_A Nostrin; nitric oxide s 57.5 4.8 0.00016 29.5 1.9 23 299-325 25-47 (79)
58 2ct4_A CDC42-interacting prote 57.5 5 0.00017 28.6 1.9 24 299-325 25-48 (70)
59 1x69_A Cortactin isoform A; SH 57.5 5.5 0.00019 29.2 2.2 22 299-324 35-56 (79)
60 2x3w_D Syndapin I, protein kin 57.3 3.8 0.00013 28.2 1.2 24 299-325 21-44 (60)
61 2fpf_A C-JUN-amino-terminal ki 57.1 5 0.00017 28.8 1.9 22 299-324 24-45 (71)
62 2vwf_A Growth factor receptor- 57.0 5.1 0.00017 27.4 1.9 23 299-325 20-42 (58)
63 2oaw_A Spectrin alpha chain, b 56.8 5.1 0.00018 27.8 1.9 24 299-326 19-42 (65)
64 2cuc_A SH3 domain containing r 56.7 4.7 0.00016 28.6 1.7 22 299-324 25-46 (70)
65 2ebp_A SAM and SH3 domain-cont 56.5 5 0.00017 29.4 1.8 22 299-324 29-50 (73)
66 3h0h_A Proto-oncogene tyrosine 56.5 4.8 0.00016 28.8 1.7 23 299-325 33-55 (73)
67 1neg_A Spectrin alpha chain, b 56.2 5 0.00017 30.5 1.9 21 299-323 35-55 (83)
68 1g2b_A Spectrin alpha chain; c 56.0 23 0.00079 24.6 5.2 22 300-325 40-61 (62)
69 1csk_A C-SRC SH3 domain; phosp 56.0 5.8 0.0002 28.4 2.1 23 299-324 29-51 (71)
70 2dl4_A Protein STAC; SH3 domai 55.8 6 0.0002 28.2 2.1 22 299-324 25-46 (68)
71 1oot_A Hypothetical 40.4 kDa p 55.7 5.4 0.00018 27.5 1.8 25 299-325 21-45 (60)
72 2fei_A CD2-associated protein; 55.4 3.7 0.00012 29.6 0.9 22 299-324 19-40 (65)
73 2v1q_A SLA1, cytoskeleton asse 55.4 5.7 0.00019 27.3 1.9 24 299-325 20-43 (60)
74 2ecz_A Sorbin and SH3 domain-c 55.2 5 0.00017 28.6 1.6 24 299-326 25-48 (70)
75 2ed0_A ABL interactor 2; coile 55.2 5.6 0.00019 29.2 1.9 22 299-324 35-56 (78)
76 2ct3_A Vinexin; SH3 domian, st 55.1 5 0.00017 28.5 1.6 23 299-325 25-47 (70)
77 2drm_A Acanthamoeba myosin IB; 55.0 5.7 0.00019 27.2 1.8 23 299-325 21-43 (58)
78 1yn8_A NBP2, NAP1-binding prot 54.8 5.4 0.00018 27.3 1.7 23 299-325 19-41 (59)
79 1s1n_A Nephrocystin 1; beta ba 54.7 3.5 0.00012 29.2 0.7 22 299-324 28-49 (68)
80 2gqi_A RAS GTPase-activating p 54.7 3.2 0.00011 30.0 0.5 22 299-324 26-47 (71)
81 1wie_A RIM binding protein 2; 54.2 5.5 0.00019 30.6 1.8 23 299-325 41-64 (96)
82 1x2q_A Signal transducing adap 54.2 6.2 0.00021 29.6 2.0 23 299-325 35-57 (88)
83 1gl5_A Tyrosine-protein kinase 53.8 6.1 0.00021 28.1 1.8 22 299-324 20-41 (67)
84 2dmo_A Neutrophil cytosol fact 53.7 5.9 0.0002 28.3 1.8 22 299-324 25-46 (68)
85 2dlp_A KIAA1783 protein; SH3 d 53.6 4.3 0.00015 30.3 1.1 25 299-325 26-50 (85)
86 2jt4_A Cytoskeleton assembly c 53.4 6.3 0.00021 28.0 1.9 24 299-325 24-47 (71)
87 2a28_A BZZ1 protein; SH3 domai 53.2 6.8 0.00023 26.5 2.0 24 299-325 18-41 (54)
88 1cka_A C-CRK N-terminal SH3 do 53.1 6.4 0.00022 26.9 1.8 22 299-324 19-40 (57)
89 1hsq_A Phospholipase C-gamma ( 52.4 3.1 0.00011 29.9 0.1 23 299-325 24-46 (71)
90 2dbm_A SH3-containing GRB2-lik 52.2 4.1 0.00014 29.4 0.7 23 299-325 25-47 (73)
91 3u23_A CD2-associated protein; 52.2 6.2 0.00021 27.3 1.7 23 299-325 25-47 (65)
92 1ujy_A RHO guanine nucleotide 51.7 4.4 0.00015 29.5 0.8 23 299-325 28-50 (76)
93 3cqt_A P59-FYN, proto-oncogene 51.6 6.6 0.00023 29.2 1.8 23 299-325 23-45 (79)
94 2rqr_A CED-12 homolog, engulfm 51.5 6.2 0.00021 31.8 1.8 22 299-325 77-98 (119)
95 1wyx_A CRK-associated substrat 51.2 6.5 0.00022 28.0 1.7 25 299-324 21-45 (69)
96 2ege_A Uncharacterized protein 51.2 6 0.00021 28.9 1.5 23 300-325 33-55 (75)
97 4glm_A Dynamin-binding protein 51.1 7.3 0.00025 27.6 1.9 22 299-324 31-52 (72)
98 2l0a_A STAM-1, signal transduc 50.9 6.5 0.00022 29.2 1.7 23 299-325 35-57 (72)
99 2cub_A Cytoplasmic protein NCK 50.8 6.8 0.00023 29.6 1.8 23 299-325 35-57 (88)
100 4e6r_A Cytoplasmic protein NCK 50.7 7.7 0.00026 26.3 1.9 21 299-323 19-39 (58)
101 3c0c_A Endophilin-A2; endocyto 50.2 7.7 0.00026 28.0 1.9 23 299-325 31-53 (73)
102 2ed1_A 130 kDa phosphatidylino 49.6 5.5 0.00019 29.1 1.1 23 299-325 28-50 (76)
103 2dl7_A KIAA0769 protein; SH3 d 49.5 8.1 0.00028 27.8 2.0 25 299-324 26-50 (73)
104 2vkn_A Protein SSU81; membrane 49.2 6.1 0.00021 28.3 1.2 21 299-324 25-45 (70)
105 3eg3_A Proto-oncogene tyrosine 48.1 9.2 0.00031 26.3 2.0 24 299-325 23-46 (63)
106 2m0y_A Dedicator of cytokinesi 47.9 5 0.00017 28.7 0.6 22 299-325 29-50 (74)
107 1x6b_A RHO guanine exchange fa 47.5 7 0.00024 28.8 1.4 22 299-325 35-56 (79)
108 1w1f_A Tyrosine-protein kinase 47.0 8.9 0.00031 26.7 1.8 22 299-325 25-46 (65)
109 1aww_A ATK, AMGX1, BPK, bruton 46.4 6.5 0.00022 27.8 1.0 22 299-324 26-47 (67)
110 3reb_B Tyrosine-protein kinase 46.1 8.6 0.00029 28.8 1.7 22 299-325 21-42 (90)
111 2b86_A Cytoplasmic protein NCK 45.5 9.5 0.00032 27.8 1.8 21 299-324 22-42 (67)
112 2yuo_A CIP85, RUN and TBC1 dom 45.5 9.6 0.00033 27.8 1.9 22 299-324 25-46 (78)
113 2xmf_A Myosin 1E SH3; motor pr 45.3 10 0.00035 26.2 1.9 23 299-325 23-45 (60)
114 2csq_A RIM-BP2, RIM binding pr 45.3 9.3 0.00032 29.3 1.8 24 299-325 43-66 (97)
115 2ega_A SH3 and PX domain-conta 45.1 9.9 0.00034 27.1 1.8 22 299-324 26-47 (70)
116 2rf0_A Mitogen-activated prote 45.0 11 0.00036 29.1 2.1 27 299-325 47-74 (89)
117 1ue9_A Intersectin 2; beta bar 44.9 11 0.00039 27.4 2.2 24 299-326 25-48 (80)
118 1udl_A Intersectin 2, KIAA1256 44.3 9.6 0.00033 29.1 1.8 22 299-324 52-73 (98)
119 2jxb_A T-cell surface glycopro 44.1 9.6 0.00033 28.6 1.7 21 299-324 49-69 (86)
120 4dot_A Group XVI phospholipase 43.3 10 0.00036 32.4 2.0 13 297-309 5-17 (140)
121 1z9q_A Neutrophil cytosol fact 43.2 6.1 0.00021 29.9 0.5 23 299-325 36-58 (79)
122 3ngp_A Spectrin alpha chain, b 42.9 12 0.0004 25.7 1.9 22 299-324 24-45 (62)
123 2pqh_A Spectrin alpha chain, b 42.5 11 0.00038 27.7 1.8 23 299-325 20-42 (80)
124 2yt6_A Adult MALE urinary blad 42.3 12 0.00042 28.7 2.1 23 299-325 45-67 (109)
125 1wi7_A SH3-domain kinase bindi 42.2 5.9 0.0002 28.1 0.2 22 299-324 25-46 (68)
126 4gjz_A Lysine-specific demethy 41.9 7.3 0.00025 32.5 0.8 21 299-327 204-224 (235)
127 2ysq_A RHO guanine nucleotide 41.9 13 0.00044 27.3 2.1 23 299-325 28-50 (81)
128 1uff_A Intersectin 2; beta bar 41.6 8.6 0.0003 29.2 1.1 25 299-325 23-47 (93)
129 1zuu_A BZZ1 protein; SH3 domai 41.5 13 0.00043 25.4 1.8 24 299-325 19-42 (58)
130 1r3h_A MHC H2-TL-T10-129; clas 41.4 7.5 0.00026 34.6 0.9 23 236-258 108-132 (260)
131 1x43_A Endophilin B1, SH3 doma 41.4 12 0.00042 27.5 1.9 24 299-324 35-58 (81)
132 1x2p_A Protein arginine N-meth 41.4 14 0.00047 26.1 2.1 22 299-324 25-46 (68)
133 1x6g_A Megakaryocyte-associate 40.7 12 0.00042 27.7 1.8 22 300-324 36-57 (81)
134 1uhf_A Intersectin 2; beta bar 40.7 9 0.00031 27.4 1.0 21 299-324 26-46 (69)
135 4dpz_X HRAS-like suppressor 2; 40.5 12 0.00042 31.8 2.0 13 297-309 5-17 (137)
136 2djq_A SH3 domain containing r 40.1 15 0.0005 26.0 2.1 22 299-324 25-46 (68)
137 2kbt_A Chimera of proto-oncoge 40.0 14 0.00047 30.7 2.2 24 299-325 23-46 (142)
138 3i5r_A Phosphatidylinositol 3- 39.9 6.2 0.00021 29.2 0.1 26 299-324 23-59 (83)
139 3a98_A DOCK2, dedicator of cyt 39.8 12 0.0004 32.2 1.8 22 299-325 35-56 (184)
140 4esr_A Jouberin; AHI-1, AHI1, 39.7 14 0.00049 26.0 2.0 23 299-325 24-46 (69)
141 2kxc_A Brain-specific angiogen 39.6 13 0.00046 26.1 1.8 24 299-325 25-48 (67)
142 2nwm_A Vinexin; cell adhesion; 39.2 14 0.00046 26.5 1.8 22 299-324 19-40 (65)
143 2egc_A SH3 and PX domain-conta 39.1 11 0.00038 27.5 1.3 22 300-325 28-49 (75)
144 1awj_A ITK; transferase, regul 38.9 6 0.00021 28.9 -0.2 22 300-325 39-60 (77)
145 1uhc_A KIAA1010 protein; beta 38.7 16 0.00056 26.6 2.2 26 299-324 31-56 (79)
146 1spk_A RSGI RUH-010, riken cDN 38.6 14 0.00048 26.4 1.8 24 299-325 26-49 (72)
147 1tuc_A Alpha-spectrin; capping 38.6 14 0.00049 26.0 1.8 22 299-324 7-28 (63)
148 2dnu_A RUH-061, SH3 multiple d 38.2 11 0.00038 26.8 1.2 24 299-326 26-49 (71)
149 2enm_A Sorting nexin-9; SH3-li 38.1 17 0.00058 26.3 2.2 23 299-324 28-50 (77)
150 1zlm_A Osteoclast stimulating 37.8 16 0.00056 24.9 2.0 23 299-325 21-43 (58)
151 2yup_A Vinexin; sorbin and SH3 37.7 11 0.00039 28.3 1.2 23 299-325 35-57 (90)
152 2d8j_A FYN-related kinase; SH3 36.7 15 0.00052 26.4 1.7 24 299-326 25-48 (77)
153 2kxd_A 11-MER peptide, SH3 dom 36.5 16 0.00055 26.3 1.8 22 299-324 17-38 (73)
154 3thk_A Spectrin alpha chain, b 36.3 17 0.00057 25.9 1.9 22 299-324 23-44 (73)
155 2gfu_A DNA mismatch repair pro 36.2 14 0.0005 30.4 1.7 26 298-328 21-46 (134)
156 2l89_A PWWP domain-containing 36.1 12 0.00042 30.0 1.2 25 298-327 4-28 (108)
157 2epd_A RHO GTPase-activating p 35.8 13 0.00044 27.1 1.2 23 299-325 28-50 (76)
158 3o5z_A Phosphatidylinositol 3- 35.3 6.7 0.00023 29.9 -0.4 27 299-325 29-66 (90)
159 2qcp_X Cation efflux system pr 34.3 22 0.00074 27.3 2.3 53 248-314 16-68 (80)
160 2o2o_A SH3-domain kinase-bindi 34.3 12 0.0004 29.0 0.8 23 299-325 36-58 (92)
161 4fu6_A PC4 and SFRS1-interacti 34.1 16 0.00053 30.8 1.6 33 292-329 15-47 (153)
162 2k9g_A SH3 domain-containing k 33.8 21 0.0007 25.6 2.0 25 299-325 27-51 (73)
163 3qby_A Hepatoma-derived growth 33.2 18 0.00063 28.3 1.8 29 296-329 2-30 (94)
164 2dil_A Proline-serine-threonin 33.1 21 0.00072 25.2 2.0 23 299-325 26-48 (69)
165 2cud_A SRC-like-adapter; SH3 d 32.9 18 0.00061 26.7 1.6 21 300-325 36-56 (79)
166 1i07_A Epidermal growth factor 32.6 13 0.00046 25.6 0.8 21 299-324 19-39 (60)
167 2vb2_X Copper protein, cation 32.4 24 0.00082 27.6 2.3 53 248-314 24-76 (88)
168 2e5k_A Suppressor of T-cell re 32.2 18 0.00061 27.3 1.5 26 299-324 34-59 (94)
169 1wxt_A Hypothetical protein FL 32.2 20 0.0007 25.4 1.8 21 299-324 25-45 (68)
170 2da9_A SH3-domain kinase bindi 31.7 22 0.00076 25.2 1.9 24 299-324 25-48 (70)
171 2v1r_A Peroxisomal membrane pr 31.6 20 0.00068 26.0 1.7 27 299-325 33-60 (80)
172 1u5s_A Cytoplasmic protein NCK 31.6 23 0.00078 25.1 1.9 24 299-324 24-47 (71)
173 2l55_A SILB,silver efflux prot 31.4 27 0.00092 27.0 2.4 20 296-315 44-63 (82)
174 1ugv_A KIAA0621, olygophrenin- 31.2 11 0.00037 27.3 0.1 23 299-324 28-50 (72)
175 1x2k_A OSTF1, osteoclast stimu 31.2 25 0.00086 24.8 2.1 23 299-325 25-47 (68)
176 2dl5_A KIAA0769 protein; SH3 d 31.2 19 0.00066 26.3 1.5 24 299-325 31-54 (78)
177 1wxb_A Epidermal growth factor 30.5 21 0.00071 25.3 1.6 21 299-324 25-45 (68)
178 1bb9_A Amphiphysin 2; transfer 30.4 20 0.00069 28.8 1.6 27 299-325 62-89 (115)
179 1wx6_A Cytoplasmic protein NCK 30.3 26 0.00088 26.2 2.1 24 299-324 35-58 (91)
180 2cre_A HEF-like protein; SH3 d 30.1 28 0.00096 24.5 2.2 25 299-324 25-49 (71)
181 1gri_A Growth factor bound pro 29.9 24 0.00082 29.8 2.1 23 299-325 176-198 (217)
182 3jv3_A Intersectin-1; SH3 doma 29.1 21 0.00072 31.1 1.7 23 299-325 20-42 (283)
183 2ydl_A SH3 domain-containing k 28.9 26 0.00088 25.4 1.8 25 299-325 20-44 (69)
184 2d8h_A SH3YL1 protein; SH3 dom 28.6 24 0.00083 25.7 1.7 24 300-325 36-59 (80)
185 1ri0_A Hepatoma-derived growth 28.6 17 0.00058 29.4 0.9 29 293-326 11-41 (110)
186 2jte_A CD2-associated protein; 28.3 29 0.001 24.0 2.0 24 299-324 24-47 (64)
187 1h3z_A Hypothetical 62.8 kDa p 28.2 15 0.00052 29.2 0.5 26 298-328 5-30 (109)
188 1at0_A 17-hedgehog; developmen 27.6 26 0.0009 29.0 1.9 25 285-309 68-101 (145)
189 2ln7_A LPXTG-SITE transpeptida 27.6 9.6 0.00033 31.8 -0.8 17 294-310 70-86 (147)
190 3k2o_A Bifunctional arginine d 26.5 4.8 0.00016 38.2 -3.1 45 291-345 253-297 (336)
191 1wlf_A PEX1, peroxisome biogen 26.2 21 0.00072 31.0 1.1 14 300-313 39-52 (179)
192 2k2m_A EPS8-like protein 1; al 26.1 29 0.001 24.6 1.7 21 299-324 26-46 (68)
193 1nm7_A Peroxisomal membrane pr 26.0 31 0.0011 25.4 1.9 26 300-325 27-53 (69)
194 4ag1_C Fynomer; hydrolase-de n 26.0 31 0.0011 25.8 1.9 23 299-325 24-46 (84)
195 2hj1_A Hypothetical protein; s 25.8 26 0.00088 28.1 1.5 9 300-308 74-82 (97)
196 2jmc_A Spectrin alpha chain, b 25.7 21 0.00072 26.1 0.9 22 299-324 9-30 (77)
197 3qwx_X Cell death abnormality 25.5 29 0.001 28.7 1.9 23 299-325 136-158 (174)
198 1wxu_A Peroxisomal biogenesis 25.1 25 0.00084 26.5 1.2 26 299-324 35-60 (93)
199 1i1j_A Melanoma derived growth 25.0 27 0.00092 27.9 1.5 24 300-326 41-66 (108)
200 3e57_A Uncharacterized protein 24.5 26 0.0009 31.2 1.4 38 293-332 70-111 (211)
201 2zkq_q 40S ribosomal protein S 23.6 41 0.0014 29.7 2.4 19 291-309 111-129 (158)
202 2eyz_A V-CRK sarcoma virus CT1 23.4 27 0.00092 31.9 1.3 23 299-325 257-279 (304)
203 2kl0_A Putative thiamin biosyn 22.6 33 0.0011 25.7 1.5 10 299-308 49-58 (73)
204 2cu3_A Unknown function protei 22.3 35 0.0012 24.4 1.5 10 299-308 48-57 (64)
205 1a62_A RHO; transcription term 22.3 48 0.0016 27.6 2.5 28 288-315 76-106 (130)
206 1ou8_A Stringent starvation pr 22.1 31 0.0011 28.9 1.3 12 228-240 92-103 (111)
207 1t2w_A Sortase; transpeptidase 22.0 34 0.0012 28.1 1.5 18 295-312 70-87 (145)
208 2lcj_A PAB POLC intein; hydrol 21.8 36 0.0012 28.9 1.7 24 286-309 90-120 (185)
209 4eqa_C PA1845 protein, putativ 21.4 69 0.0024 27.5 3.3 58 217-274 62-122 (153)
210 2daq_A WHSC1L1 protein, isofor 21.1 30 0.001 27.4 1.0 27 298-329 7-33 (110)
211 1khc_A DNA cytosine-5 methyltr 20.8 35 0.0012 29.0 1.4 28 298-330 10-37 (147)
212 2qyp_A Proactivator polypeptid 20.0 47 0.0016 25.0 1.9 29 98-126 59-87 (91)
No 1
>1fs1_A SKP2 F-BOX, cyclin A/CDK2-associated P19; F-BOX, LRR, leucine-rich repeat, SCF, ubiquitin, ubiquitin protein ligase; 1.80A {Homo sapiens} SCOP: a.158.1.1 PDB: 1ldk_E
Probab=99.00 E-value=2.5e-10 Score=80.21 Aligned_cols=49 Identities=22% Similarity=0.291 Sum_probs=40.6
Q ss_pred CCCCCCCCCcHHHHHHHHccCChhhHHHHHhhcHHHHHhccCchHHHHh
Q 018722 88 GAEMSVLDLPELVLECILEKLPPSGLCNMAAVCSSLRDRCMSDHLWEKH 136 (351)
Q Consensus 88 ~~~~sLLDLPeelLd~ILs~LSP~DLcrmAaVCrsLRerc~SD~LWekl 136 (351)
..+.++.+||+|+|..|+++|++.||+++++||+.+|+.+.++.+|+++
T Consensus 4 ~~~~~~~~LP~eil~~I~~~L~~~dl~~~~~Vck~w~~~~~~~~lW~~l 52 (53)
T 1fs1_A 4 FPGVSWDSLPDELLLGIFSCLCLPELLKVSGVCKRWYRLASDESLWQTL 52 (53)
T ss_dssp -----CCSSCHHHHHHHHTTSCGGGHHHHHTTCHHHHHHHTCGGGC---
T ss_pred CCCCCHHHCCHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhCChHHHHhc
Confidence 3456799999999999999999999999999999999999999999864
No 2
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=98.24 E-value=7.9e-07 Score=79.78 Aligned_cols=50 Identities=24% Similarity=0.340 Sum_probs=46.7
Q ss_pred CCCCCCcHHHHHHHHccCChhhHHHHHhhcHHHHHhccCchHHHHhhhhh
Q 018722 91 MSVLDLPELVLECILEKLPPSGLCNMAAVCSSLRDRCMSDHLWEKHMKQK 140 (351)
Q Consensus 91 ~sLLDLPeelLd~ILs~LSP~DLcrmAaVCrsLRerc~SD~LWeklV~~k 140 (351)
-.+.+||+|++..||+||+|.||+++++||+.+|+.+.++.||+++.++.
T Consensus 17 d~~~~lp~e~~~~i~~~l~~~~l~~~~~v~~~~~~~~~~~~~w~~~~~~~ 66 (445)
T 2ovr_B 17 DFISLLPKELALYVLSFLEPKDLLQAAQTCRYWRILAEDNLLWREKCKEE 66 (445)
T ss_dssp STTTSSCHHHHHHHHTTSCHHHHHHHTTSCHHHHHHHTCSHHHHHHHTTT
T ss_pred ChhHHCCHHHHHHHHHhCCHHHHHHHHHHhHHHHhhcCchhHhhhheeec
Confidence 45888999999999999999999999999999999999999999998654
No 3
>3l2o_B F-box only protein 4; small G protein fold, UBL conjugation pathway, ubiquitin Pro ligase, protein binding-cell cycle complex; 2.80A {Homo sapiens}
Probab=98.20 E-value=8.9e-07 Score=84.99 Aligned_cols=54 Identities=22% Similarity=0.433 Sum_probs=48.9
Q ss_pred CCCCCcHHHHHHHHccCChhhHHHHHhhcHHHHHhccCchHHHHhhhh---hhcccc
Q 018722 92 SVLDLPELVLECILEKLPPSGLCNMAAVCSSLRDRCMSDHLWEKHMKQ---KWGRIV 145 (351)
Q Consensus 92 sLLDLPeelLd~ILs~LSP~DLcrmAaVCrsLRerc~SD~LWeklV~~---kwp~vL 145 (351)
.+-+||.+++-.||+||+|.|||++++||+..|..++.+.||..++.+ +|+.+-
T Consensus 4 ~l~~LP~ei~l~IlsfL~p~DL~~l~~vcr~Wr~la~D~~LWr~~l~rd~~~W~si~ 60 (312)
T 3l2o_B 4 TLTRLPIDVQLYILSFLSPHDLCQLGSTNHYWNETVRDPILWRYFLLRDLPSWSSVD 60 (312)
T ss_dssp HHHHSCHHHHHHHHHTSCHHHHHHHHTTCHHHHHHHTCHHHHHHHHHSSGGGCCCCC
T ss_pred hhHhCCHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhccchHHHHHHhccCCCCCccc
Confidence 467899999999999999999999999999999999999999999985 465544
No 4
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=98.17 E-value=1.1e-06 Score=79.01 Aligned_cols=51 Identities=25% Similarity=0.419 Sum_probs=47.8
Q ss_pred CCCCCcHH----HHHHHHccCChhhHHHHHhhcHHHHHhccCchHHHHhhhhhhc
Q 018722 92 SVLDLPEL----VLECILEKLPPSGLCNMAAVCSSLRDRCMSDHLWEKHMKQKWG 142 (351)
Q Consensus 92 sLLDLPee----lLd~ILs~LSP~DLcrmAaVCrsLRerc~SD~LWeklV~~kwp 142 (351)
.+..||+| ++..||+||+|.||+++++||+.+|+.+..+.||.++..+++.
T Consensus 10 ~~~~lp~e~~~~~~~~i~~~l~~~~l~~~~~v~~~w~~~~~~~~~w~~~~~~~~~ 64 (435)
T 1p22_A 10 FITALPARGLDHIAENILSYLDAKSLCAAELVCKEWYRVTSDGMLWKKLIERMVR 64 (435)
T ss_dssp HHHHTGGGTCHHHHHHHHTTCCHHHHHHHHHHCHHHHHHHHHTTHHHHHHHHHHT
T ss_pred hHHHCCcchHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcChHHHHHHHHhhcC
Confidence 46679999 9999999999999999999999999999999999999998864
No 5
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=98.05 E-value=3.3e-06 Score=75.46 Aligned_cols=49 Identities=18% Similarity=0.214 Sum_probs=45.1
Q ss_pred CCCCCcHHHHHHHHccCChhhHHHHHhhcHHHHHhccC-chHHHHhhhhh
Q 018722 92 SVLDLPELVLECILEKLPPSGLCNMAAVCSSLRDRCMS-DHLWEKHMKQK 140 (351)
Q Consensus 92 sLLDLPeelLd~ILs~LSP~DLcrmAaVCrsLRerc~S-D~LWeklV~~k 140 (351)
.+.+||+|++..||+||+|.||++.++||+..++.+.+ +.||+++..+.
T Consensus 14 ~~~~lp~~~~~~i~~~l~~~~l~~~~~v~~~w~~~~~~~~~~w~~~~~~~ 63 (464)
T 3v7d_B 14 LITSLPFEISLKIFNYLQFEDIINSLGVSQNWNKIIRKSTSLWKKLLISE 63 (464)
T ss_dssp HHHHSCHHHHHHHHTTSCHHHHHHHHTTCHHHHHHHTTCHHHHHHHHHHT
T ss_pred ChHHCCHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHcCCHHHHHHHHhcc
Confidence 46789999999999999999999999999999999998 89999998544
No 6
>2e31_A FBS1, F-box only protein 2; ubiquitin, SCF, ubiquitin ligase, FBS1; 2.40A {Mus musculus} PDB: 2e32_A
Probab=98.01 E-value=4.1e-06 Score=79.20 Aligned_cols=50 Identities=26% Similarity=0.431 Sum_probs=48.2
Q ss_pred CCCCCCcHHHHHHHHccCChhhHH-HHHhhcHHHHHhccCchHHHHhhhhh
Q 018722 91 MSVLDLPELVLECILEKLPPSGLC-NMAAVCSSLRDRCMSDHLWEKHMKQK 140 (351)
Q Consensus 91 ~sLLDLPeelLd~ILs~LSP~DLc-rmAaVCrsLRerc~SD~LWeklV~~k 140 (351)
+.+.+||+|+|..||++|+|.||+ +.++||+..|+.+.++.||.++.++.
T Consensus 49 ~~~~~LP~ell~~Il~~Lp~~~L~~r~~~VCk~Wr~l~~~~~~w~~~~~~~ 99 (297)
T 2e31_A 49 EYLAELPEPLLLRVLAELPATELVQACRLVCLRWKELVDGAPLWLLKCQQE 99 (297)
T ss_dssp CCTTSSCHHHHHHHHHTSCHHHHHHTGGGTCHHHHHHHTSHHHHHHHHHHT
T ss_pred cChhhCCHHHHHHHHHcCCHHHHHHHHHHHhHHHHHHhcChHHHHHHhhcc
Confidence 578899999999999999999999 99999999999999999999999887
No 7
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A
Probab=97.48 E-value=3.6e-05 Score=67.29 Aligned_cols=49 Identities=22% Similarity=0.307 Sum_probs=41.7
Q ss_pred CCCCCCCCCCcHHHHHHHHccCChhhHHHHHhhcHHHHHhccCchHHHH
Q 018722 87 GGAEMSVLDLPELVLECILEKLPPSGLCNMAAVCSSLRDRCMSDHLWEK 135 (351)
Q Consensus 87 ~~~~~sLLDLPeelLd~ILs~LSP~DLcrmAaVCrsLRerc~SD~LWek 135 (351)
..++.++-+||+|+|..|+++|+..|+++++.||+..|+.+.+..+|..
T Consensus 3 ~~~~~~~~~LP~eil~~If~~L~~~d~~~~~~vc~~W~~~~~~~~~~~~ 51 (336)
T 2ast_B 3 NFPGVSWDSLPDELLLGIFSCLCLPELLKVSGVCKRWYRLASDESLWQT 51 (336)
T ss_dssp ----CCSSSSCHHHHHHHHTTSCHHHHHHTTSSCHHHHHHHTCSTTSSE
T ss_pred ccccCChhhCCHHHHHHHHHhCCHHHHHHHHHHHHHHHHHhcCchhhee
Confidence 3456789999999999999999999999999999999999877777764
No 8
>3h8z_A FragIle X mental retardation syndrome-related Pro; tudor domains, FXR2, structura genomics, structural genomics consortium, SGC; 1.92A {Homo sapiens} PDB: 3o8v_A 3kuf_A 2bkd_N*
Probab=96.78 E-value=0.001 Score=56.69 Aligned_cols=64 Identities=23% Similarity=0.535 Sum_probs=44.9
Q ss_pred CCCceeecCCCCCCCceeeecCCCccccccCCCCCCCcccccccccCCCCCCCeeEEEeeccCCCCccchhhhhccc
Q 018722 252 STDTFQARYPPHGRRPIAIECGVPWERLRAAPVDTSPHDLHISDCLNDLHPGDHIEIQWRRNKEFPYGWWYGVVGHL 328 (351)
Q Consensus 252 ~TDTF~ARYpphGrr~~~ie~~i~WdRlRapPvdT~~hdlh~Sdcl~dLkPGDHIEIQWRrnkefPYgWWYgvVGHl 328 (351)
..|.+..+|.. .++ .|+.|+-+.+|.||...+ + .++..||-|||=+|.|-.=|.|||-|.|-..
T Consensus 26 ~~d~~~V~f~n-~w~---~~~~vp~~~vRlpP~~~~-------~--~~f~~gd~VEV~~~~~d~ep~gWw~a~I~~~ 89 (128)
T 3h8z_A 26 HEDSVTIFFEN-NWQ---SERQIPFGDVRLPPPADY-------N--KEITEGDEVEVYSRANEQEPCGWWLARVRMM 89 (128)
T ss_dssp CSSEEEEEETT-CTT---CCEEEEGGGEECCCCC-------------CCCTTCEEEEEECC---CCCEEEEEEEEEE
T ss_pred eCCcEEEEEcc-ccC---cceEechhhEEcCCCccc-------c--cCCCCCCEEEEEecCCCCCcCccEEEEEEEe
Confidence 45556666642 233 377888999999987643 2 3789999999999999999999999998544
No 9
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B*
Probab=95.19 E-value=0.011 Score=55.32 Aligned_cols=34 Identities=26% Similarity=0.415 Sum_probs=29.3
Q ss_pred CCCCcHHHHHHHHccCC-hhhHHHHHhhcHHHHHh
Q 018722 93 VLDLPELVLECILEKLP-PSGLCNMAAVCSSLRDR 126 (351)
Q Consensus 93 LLDLPeelLd~ILs~LS-P~DLcrmAaVCrsLRer 126 (351)
+-+||+|+|..|+++|+ +.|+++++.||+..|+.
T Consensus 6 ~~~LPdevL~~If~~L~~~~d~~~~s~vck~W~~~ 40 (594)
T 2p1m_B 6 ALSFPEEVLEHVFSFIQLDKDRNSVSLVCKSWYEI 40 (594)
T ss_dssp ----CHHHHHHHHHTCCCHHHHHHHHTSCHHHHHH
T ss_pred hhhCCHHHHHHHHhhcCCchhHHHHHHHHHHHHHh
Confidence 56799999999999999 99999999999999987
No 10
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B*
Probab=94.44 E-value=0.018 Score=54.02 Aligned_cols=36 Identities=17% Similarity=0.247 Sum_probs=32.2
Q ss_pred CCCCCCcHHHHHHHHccC-ChhhHHHHHhhcHHHHHh
Q 018722 91 MSVLDLPELVLECILEKL-PPSGLCNMAAVCSSLRDR 126 (351)
Q Consensus 91 ~sLLDLPeelLd~ILs~L-SP~DLcrmAaVCrsLRer 126 (351)
....+||+|+|..|+++| ++.|+++++.||+..+..
T Consensus 11 ~~~~~LPdeil~~I~~~L~~~~d~~~~s~vck~W~~~ 47 (592)
T 3ogk_B 11 LSCVATVDDVIEQVMTYITDPKDRDSASLVCRRWFKI 47 (592)
T ss_dssp -CCCCCGGGTHHHHHTTCCCHHHHHHHTTSCHHHHHH
T ss_pred hccCCCCHHHHHHHHHhcCCHHHHHHHHHHhHHHHHh
Confidence 345689999999999999 899999999999998876
No 11
>2lkt_A Retinoic acid receptor responder protein 3; TIG3, human tumor suppressor II family, NLPC/P60, hydrolase; NMR {Homo sapiens}
Probab=83.38 E-value=0.58 Score=37.86 Aligned_cols=13 Identities=46% Similarity=0.662 Sum_probs=11.3
Q ss_pred cCCCCCCCeeEEE
Q 018722 297 LNDLHPGDHIEIQ 309 (351)
Q Consensus 297 l~dLkPGDHIEIQ 309 (351)
-.+.||||||||+
T Consensus 5 ~~ep~pGDlI~~~ 17 (125)
T 2lkt_A 5 HQEPKPGDLIEIF 17 (125)
T ss_dssp SCCCCTTCEEEEE
T ss_pred CCCCCCCCEEEEe
Confidence 4689999999995
No 12
>4hfx_A Transcription elongation factor B polypeptide 3; structural genomics, PSI-biology, northeast structural genom consortium, NESG; 2.54A {Homo sapiens}
Probab=78.60 E-value=0.72 Score=37.78 Aligned_cols=58 Identities=28% Similarity=0.558 Sum_probs=33.7
Q ss_pred CCCcHHHHHHHHccCChhhHHHHHhhcHHHHHhccCchHHHHhhhhhhccccCccccchhh
Q 018722 94 LDLPELVLECILEKLPPSGLCNMAAVCSSLRDRCMSDHLWEKHMKQKWGRIVGPAAYREWQ 154 (351)
Q Consensus 94 LDLPeelLd~ILs~LSP~DLcrmAaVCrsLRerc~SD~LWeklV~~kwp~vLgpaa~~eWq 154 (351)
.-.|=++|.-||++-+|..|.++=.-|..|. -.+|.||.+|+.+..+.. .|....+|.
T Consensus 11 ~~~Py~lL~PVLek~tp~QL~~IE~~nP~L~--~dTdeLWk~~c~rdF~~~-~p~e~esWR 68 (97)
T 4hfx_A 11 MGVPYSVLEPVLERCTPDQLYRIEEYNHVLI--EETDQLWKVHCHRDFKEE-RPEEYESWR 68 (97)
T ss_dssp ---------CCGGGCCHHHHHHHHTC--------CCHHHHHHHC----CCS-CCCSSSCHH
T ss_pred cCCcHHHHHHHHccCCHHHHHHHHHhCcccc--hhhHHHHHHHHHhHCccc-CCCCCCCHH
Confidence 3457788999999999999999999999774 468999999999999954 356667883
No 13
>1k1z_A VAV; SH3, proto-oncogene, signaling protein; NMR {Mus musculus} SCOP: b.34.2.1
Probab=73.07 E-value=2.9 Score=30.59 Aligned_cols=22 Identities=36% Similarity=0.839 Sum_probs=17.3
Q ss_pred CCCCCeeEEEeeccCCCCccchhhh
Q 018722 300 LHPGDHIEIQWRRNKEFPYGWWYGV 324 (351)
Q Consensus 300 LkPGDHIEIQWRrnkefPYgWWYgv 324 (351)
|+.||.|+|-=+.. .=|||+|-
T Consensus 37 f~~Gd~i~v~~~~~---~~gWw~g~ 58 (78)
T 1k1z_A 37 LNPGDIVELTKAEA---EHNWWEGR 58 (78)
T ss_dssp BCTTCEEEEEECCS---SCSCEEEE
T ss_pred CCCCCEEEEEEcCC---CCCeEEEE
Confidence 69999999986631 34999996
No 14
>2lj0_A Sorbin and SH3 domain-containing protein 1; R85FL, ponsin, CAP, signaling protein; NMR {Homo sapiens} PDB: 2lj1_A
Probab=72.06 E-value=1.6 Score=32.17 Aligned_cols=23 Identities=26% Similarity=0.697 Sum_probs=18.0
Q ss_pred CCCCCCeeEEEeeccCCCCccchhhhh
Q 018722 299 DLHPGDHIEIQWRRNKEFPYGWWYGVV 325 (351)
Q Consensus 299 dLkPGDHIEIQWRrnkefPYgWWYgvV 325 (351)
.|+.||.|+|-=+.+ =|||+|.+
T Consensus 24 s~~~Gd~i~v~~~~~----~gWw~g~~ 46 (65)
T 2lj0_A 24 ELRDGDIVDVMEKCD----DGWFVGTS 46 (65)
T ss_dssp CBCTTCEEEEEEECT----TSEEEEEE
T ss_pred CCCCCCEEEEeEeCC----CCEEEEEE
Confidence 489999999974433 38999975
No 15
>2kgt_A Tyrosine-protein kinase 6; SH3 domain, SRC kinase, PTK6, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; NMR {Homo sapiens}
Probab=71.59 E-value=1.4 Score=31.62 Aligned_cols=21 Identities=24% Similarity=0.833 Sum_probs=16.4
Q ss_pred CCCCCeeEEEeeccCCCCccchhhhh
Q 018722 300 LHPGDHIEIQWRRNKEFPYGWWYGVV 325 (351)
Q Consensus 300 LkPGDHIEIQWRrnkefPYgWWYgvV 325 (351)
|+.||.|+| -+.+ =|||+|..
T Consensus 29 ~~~Gd~i~v-~~~~----~~Ww~g~~ 49 (72)
T 2kgt_A 29 FRAGDVFHV-ARKE----EQWWWATL 49 (72)
T ss_dssp CCTTCCEEE-EEEC----SSCEEEEE
T ss_pred CCCCCEEEE-eeCC----CCEEEEEE
Confidence 799999999 4322 48999976
No 16
>2bzy_A CRK-like protein, CRKL SH3C; SH3 domain, dimer, nuclear export; 2.5A {Homo sapiens} PDB: 2bzx_A
Probab=71.36 E-value=1.9 Score=30.82 Aligned_cols=22 Identities=27% Similarity=0.481 Sum_probs=17.4
Q ss_pred CCCCCCeeEEEeeccCCCCccchhhh
Q 018722 299 DLHPGDHIEIQWRRNKEFPYGWWYGV 324 (351)
Q Consensus 299 dLkPGDHIEIQWRrnkefPYgWWYgv 324 (351)
.|+.||.|+|-=+.+ =|||+|.
T Consensus 21 sf~~Gd~i~v~~~~~----~~Ww~g~ 42 (67)
T 2bzy_A 21 ALEVGDIVKVTRMNI----NGQWEGE 42 (67)
T ss_dssp CBCTTCEEEEEEECS----SSEEEEE
T ss_pred ccCCCCEEEEEEecC----CCeEEEE
Confidence 479999999986643 4899884
No 17
>3rnj_A Brain-specific angiogenesis inhibitor 1-associate 2; structural genomics, structural genomics consortium, SGC, BE barrel; HET: EDT; 1.50A {Homo sapiens} SCOP: b.34.2.1
Probab=71.15 E-value=1.4 Score=31.43 Aligned_cols=23 Identities=35% Similarity=0.634 Sum_probs=17.0
Q ss_pred CCCCCCeeEEEeeccCCCCccchhhh
Q 018722 299 DLHPGDHIEIQWRRNKEFPYGWWYGV 324 (351)
Q Consensus 299 dLkPGDHIEIQWRrnkefPYgWWYgv 324 (351)
.++.||.|+|-=+ +-.=|||+|.
T Consensus 26 sf~~Gd~i~v~~~---~~~~gW~~g~ 48 (67)
T 3rnj_A 26 SFKEGDLITLLVP---EARDGWHYGE 48 (67)
T ss_dssp CBCTTCEEEECSS---SCBTTEEEEE
T ss_pred cCCCCCEEEEeec---cCCCCCEEEE
Confidence 4799999998533 2334999996
No 18
>1y0m_A 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase gamma 1; SH3 domain, hydrolase; 1.20A {Rattus norvegicus} PDB: 1ywp_A 1ywo_A
Probab=70.29 E-value=2 Score=29.95 Aligned_cols=23 Identities=22% Similarity=0.498 Sum_probs=18.0
Q ss_pred CCCCCCeeEEEeeccCCCCccchhhhh
Q 018722 299 DLHPGDHIEIQWRRNKEFPYGWWYGVV 325 (351)
Q Consensus 299 dLkPGDHIEIQWRrnkefPYgWWYgvV 325 (351)
.|+.||.|+|-=+.+ =|||+|-.
T Consensus 21 s~~~Gd~i~v~~~~~----~~W~~g~~ 43 (61)
T 1y0m_A 21 TFTKSAIIQNVEKQD----GGWWRGDY 43 (61)
T ss_dssp CBCTTCEEEEEECCS----SSEEEEEE
T ss_pred CCcCCCEEEEEEecC----CCEEEEEE
Confidence 479999999976643 29999854
No 19
>1jo8_A ABP1P, actin binding protein; SH3 domain actin-binding-protein, structural protein; 1.30A {Saccharomyces cerevisiae} SCOP: b.34.2.1 PDB: 2k3b_A 2rpn_A
Probab=68.41 E-value=2.4 Score=29.31 Aligned_cols=24 Identities=21% Similarity=0.361 Sum_probs=18.7
Q ss_pred CCCCCCeeEEEeeccCCCCccchhhhhc
Q 018722 299 DLHPGDHIEIQWRRNKEFPYGWWYGVVG 326 (351)
Q Consensus 299 dLkPGDHIEIQWRrnkefPYgWWYgvVG 326 (351)
.++.||.|+|-=+.+ =|||+|..+
T Consensus 18 s~~~Gd~i~v~~~~~----~~Ww~g~~~ 41 (58)
T 1jo8_A 18 TFVENDKIINIEFVD----DDWWLGELE 41 (58)
T ss_dssp CBCTTCEEEEEECCS----SSEEEEEET
T ss_pred ccCCCCEEEEEEecC----CCcEEEEEC
Confidence 479999999976644 389999764
No 20
>1tg0_A BBC1 protein, myosin tail region-interacting protein MTI1; yeast, SH3 domain, structural genomics, contractIle protein; 0.97A {Saccharomyces cerevisiae} PDB: 1zuk_A 1wdx_A
Probab=68.29 E-value=2.4 Score=30.25 Aligned_cols=24 Identities=13% Similarity=0.419 Sum_probs=18.3
Q ss_pred CCCCCCeeEEEeeccCCCCccchhhhhc
Q 018722 299 DLHPGDHIEIQWRRNKEFPYGWWYGVVG 326 (351)
Q Consensus 299 dLkPGDHIEIQWRrnkefPYgWWYgvVG 326 (351)
.|+.||.|+|-=+.+ =|||+|...
T Consensus 25 sf~~Gd~i~v~~~~~----~~Ww~g~~~ 48 (68)
T 1tg0_A 25 NFEKDQEIIVTSVED----AEWYFGEYQ 48 (68)
T ss_dssp CBCTTCEEEEEEECS----SSEEEEEEE
T ss_pred CCCCCCEEEEEEecC----CCeEEEEEC
Confidence 379999999985533 389999754
No 21
>1ruw_A Myosin-3 isoform, MYO3; SH3 domain, yeast, high-throughput, structural genomics, contractIle protein; 1.80A {Saccharomyces cerevisiae} PDB: 2btt_A 1va7_A
Probab=67.05 E-value=2.6 Score=30.07 Aligned_cols=24 Identities=25% Similarity=0.351 Sum_probs=18.6
Q ss_pred CCCCCCeeEEEeeccCCCCccchhhhhc
Q 018722 299 DLHPGDHIEIQWRRNKEFPYGWWYGVVG 326 (351)
Q Consensus 299 dLkPGDHIEIQWRrnkefPYgWWYgvVG 326 (351)
.|+.||.|+|-=+.+ =|||+|...
T Consensus 21 s~~~Gd~i~v~~~~~----~~W~~g~~~ 44 (69)
T 1ruw_A 21 PLKKGDIVFISRDEP----SGWSLAKLL 44 (69)
T ss_dssp CBCTTCEEEEEEECT----TSEEEEEET
T ss_pred cCCCCCEEEEEEecC----CCeEEEEEC
Confidence 379999999986543 489998654
No 22
>2eyx_A V-CRK sarcoma virus CT10 oncogene homolog isoform A; SH3, signaling protein; NMR {Homo sapiens}
Probab=66.76 E-value=2.2 Score=30.55 Aligned_cols=22 Identities=23% Similarity=0.424 Sum_probs=17.2
Q ss_pred CCCCCCeeEEEeeccCCCCccchhhh
Q 018722 299 DLHPGDHIEIQWRRNKEFPYGWWYGV 324 (351)
Q Consensus 299 dLkPGDHIEIQWRrnkefPYgWWYgv 324 (351)
.|+.||.|+|-=+. .=|||+|.
T Consensus 26 s~~~Gd~i~v~~~~----~~gWw~g~ 47 (67)
T 2eyx_A 26 ALEVGELVKVTKIN----VSGQWEGE 47 (67)
T ss_dssp CBCSSEEEEEEEEC----TTSEEEEE
T ss_pred ccCCCCEEEEEEec----CCCEEEEE
Confidence 47999999998553 35899984
No 23
>1gcq_C VAV proto-oncogene; SH3 domain, protein-protein complex, GRB2,VAV, signaling protein/signaling protein complex; 1.68A {Mus musculus} SCOP: b.34.2.1 PDB: 1gcp_A
Probab=66.06 E-value=2.9 Score=29.84 Aligned_cols=21 Identities=38% Similarity=0.911 Sum_probs=16.7
Q ss_pred CCCCCeeEEEeeccCCCCccchhh
Q 018722 300 LHPGDHIEIQWRRNKEFPYGWWYG 323 (351)
Q Consensus 300 LkPGDHIEIQWRrnkefPYgWWYg 323 (351)
|+.||.|+|-=+.. -=|||+|
T Consensus 29 f~~Gd~i~v~~~~~---~~~Ww~g 49 (70)
T 1gcq_C 29 LNPGDIVELTKAEA---EHNWWEG 49 (70)
T ss_dssp BCTTCEEEEEECCT---TCSEEEE
T ss_pred cCCCCEEEEEeCCC---CCCCeEE
Confidence 79999999986632 3489999
No 24
>2bz8_A SH3-domain kinase binding protein 1; SH3 domain, CIN85 adaptor protein, CBL ubiquitin ligase; 2.0A {Homo sapiens}
Probab=65.92 E-value=2.8 Score=28.95 Aligned_cols=23 Identities=26% Similarity=0.686 Sum_probs=18.1
Q ss_pred CCCCCCeeEEEeeccCCCCccchhhhh
Q 018722 299 DLHPGDHIEIQWRRNKEFPYGWWYGVV 325 (351)
Q Consensus 299 dLkPGDHIEIQWRrnkefPYgWWYgvV 325 (351)
.++.||.|+|-=+.+ =|||+|-.
T Consensus 19 s~~~Gd~i~v~~~~~----~~Ww~g~~ 41 (58)
T 2bz8_A 19 TISVGEIITNIRKED----GGWWEGQI 41 (58)
T ss_dssp CBCTTCEEEEEECCT----TTEEEEEE
T ss_pred eECCCCEEEEEEeCC----CCEEEEEE
Confidence 489999999976543 48999864
No 25
>2o9s_A Ponsin; SH3 domain, signaling protein; 0.83A {Homo sapiens} PDB: 2o31_A 2o9v_A 2o2w_A
Probab=65.31 E-value=2.9 Score=29.70 Aligned_cols=24 Identities=17% Similarity=0.515 Sum_probs=18.3
Q ss_pred CCCCCCeeEEEeeccCCCCccchhhhhc
Q 018722 299 DLHPGDHIEIQWRRNKEFPYGWWYGVVG 326 (351)
Q Consensus 299 dLkPGDHIEIQWRrnkefPYgWWYgvVG 326 (351)
.++.||.|+|-=+.+ =|||+|...
T Consensus 24 s~~~Gd~i~v~~~~~----~~Ww~g~~~ 47 (67)
T 2o9s_A 24 SFRKGERITLLRQVD----ENWYEGRIP 47 (67)
T ss_dssp CBCTTCEEEEEEECS----SSEEEEECT
T ss_pred CCCCCCEEEEEEecC----CCEEEEEEC
Confidence 479999999985433 289999754
No 26
>2lx7_A GAS-7, growth arrest-specific protein 7; structural genomics, northeast structural genomics consortiu target HR8574A, PSI-biology; NMR {Homo sapiens}
Probab=64.90 E-value=1.9 Score=31.43 Aligned_cols=23 Identities=26% Similarity=0.604 Sum_probs=17.4
Q ss_pred CCCCCCeeEEEeeccCCCCccchhhhh
Q 018722 299 DLHPGDHIEIQWRRNKEFPYGWWYGVV 325 (351)
Q Consensus 299 dLkPGDHIEIQWRrnkefPYgWWYgvV 325 (351)
.|+.||.|+|-=+.+ =|||+|..
T Consensus 22 s~~~Gd~i~v~~~~~----~~Ww~g~~ 44 (60)
T 2lx7_A 22 RFAAGELITLLQVPD----GGWWEGEK 44 (60)
T ss_dssp CCCTTCEEEBSCCCT----TSCEEEEC
T ss_pred cCCCCCEEEEeEecC----CCeEEEEe
Confidence 589999999964332 28999964
No 27
>2j05_A RAS GTPase-activating protein 1; GTPase activation, SH3 domain, SH2 domain, SRC homology 3, RAS signaling pathway, proto- oncogene, phosphorylation; 1.5A {Homo sapiens} PDB: 2j06_A
Probab=64.57 E-value=3.1 Score=29.40 Aligned_cols=22 Identities=18% Similarity=0.394 Sum_probs=17.0
Q ss_pred CCCCCCeeEEEeeccCCCCccchhhh
Q 018722 299 DLHPGDHIEIQWRRNKEFPYGWWYGV 324 (351)
Q Consensus 299 dLkPGDHIEIQWRrnkefPYgWWYgv 324 (351)
.|+.||.|+|-=+.+ =|||+|.
T Consensus 24 s~~~Gd~i~v~~~~~----~gW~~g~ 45 (65)
T 2j05_A 24 SFLKGDMFIVHNELE----DGWMWVT 45 (65)
T ss_dssp CBCTTCEEEEEEECT----TSEEEEE
T ss_pred cCCCCCEEEEeEecC----CCEEEEE
Confidence 479999999975433 2999985
No 28
>2g6f_X RHO guanine nucleotide exchange factor 7; SH3 domain, peptide interaction, signaling protein; HET: NCO; 0.92A {Rattus norvegicus} PDB: 2df6_A* 2p4r_A 2esw_A
Probab=64.19 E-value=3.3 Score=28.67 Aligned_cols=22 Identities=32% Similarity=0.774 Sum_probs=17.5
Q ss_pred CCCCCCeeEEEeeccCCCCccchhhh
Q 018722 299 DLHPGDHIEIQWRRNKEFPYGWWYGV 324 (351)
Q Consensus 299 dLkPGDHIEIQWRrnkefPYgWWYgv 324 (351)
.++.||.|+|-=+.+ =|||+|-
T Consensus 22 s~~~Gd~i~v~~~~~----~~Ww~g~ 43 (59)
T 2g6f_X 22 SFSKGDVIHVTRVEE----GGWWEGT 43 (59)
T ss_dssp CBCTTCEEEEEEECT----TSEEEEE
T ss_pred CCCCCCEEEEEEecC----CCEEEEE
Confidence 379999999986644 4899985
No 29
>2iim_A Proto-oncogene tyrosine-protein kinase LCK; beta-barrels, signaling protein; HET: PG4; 1.00A {Homo sapiens} SCOP: b.34.2.1 PDB: 1h92_A 1kik_A
Probab=64.03 E-value=3.1 Score=29.10 Aligned_cols=20 Identities=20% Similarity=0.637 Sum_probs=16.5
Q ss_pred CCCCCeeEEEeeccCCCCccchhhh
Q 018722 300 LHPGDHIEIQWRRNKEFPYGWWYGV 324 (351)
Q Consensus 300 LkPGDHIEIQWRrnkefPYgWWYgv 324 (351)
++.||.|+|-=+ + . |||+|.
T Consensus 25 ~~~Gd~i~v~~~---~-~-~Ww~g~ 44 (62)
T 2iim_A 25 FEKGEQLRILEQ---S-G-EWWKAQ 44 (62)
T ss_dssp BCTTCEEEEEEC---C-S-SEEEEE
T ss_pred CCCCCEEEEEEc---C-C-CEEEEE
Confidence 799999999865 2 4 999985
No 30
>2ak5_A RHO guanine nucleotide exchange factor 7; adaptor proteins, CIN85, PIX/COOL, protein-protein interaction, X-RAY, endocytosis; 1.85A {Rattus norvegicus} PDB: 1zsg_A
Probab=63.81 E-value=3.2 Score=29.09 Aligned_cols=22 Identities=32% Similarity=0.774 Sum_probs=17.4
Q ss_pred CCCCCCeeEEEeeccCCCCccchhhh
Q 018722 299 DLHPGDHIEIQWRRNKEFPYGWWYGV 324 (351)
Q Consensus 299 dLkPGDHIEIQWRrnkefPYgWWYgv 324 (351)
.++.||.|+|-=+.+ =|||+|-
T Consensus 24 s~~~Gd~i~v~~~~~----~~Ww~g~ 45 (64)
T 2ak5_A 24 SFSKGDVIHVTRVEE----GGWWEGT 45 (64)
T ss_dssp CBCTTCEEEEEECCT----TSEEEEE
T ss_pred cCCCCCEEEEeEecC----CCEEEEE
Confidence 379999999986543 4899985
No 31
>2csi_A RIM-BP2, RIM binding protein 2; SH3 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=62.85 E-value=3.2 Score=30.40 Aligned_cols=24 Identities=25% Similarity=0.522 Sum_probs=18.0
Q ss_pred CCCCCCeeEEEeeccCCCCccchhhhh
Q 018722 299 DLHPGDHIEIQWRRNKEFPYGWWYGVV 325 (351)
Q Consensus 299 dLkPGDHIEIQWRrnkefPYgWWYgvV 325 (351)
.|+.||.|+|-=+.+. =|||+|-.
T Consensus 32 sf~~Gd~i~v~~~~~~---~gWw~g~~ 55 (76)
T 2csi_A 32 TFCTGDIITVFGEIDE---DGFYYGEL 55 (76)
T ss_dssp CCCTTCEEEEESSCCS---SSEEEEEE
T ss_pred cCCCCCEEEEeEecCC---CCeEEEEE
Confidence 3799999999866443 28999753
No 32
>2j6f_A CD2-associated protein; metal-binding, immune response, SH3, SH2 domain, SH3 zinc-finger, SH3- binding, UBL conjugation pathway; 1.7A {Homo sapiens} PDB: 2j6k_A 2j6o_A 2j7i_A 2krm_A
Probab=62.84 E-value=3.6 Score=28.84 Aligned_cols=24 Identities=21% Similarity=0.379 Sum_probs=17.9
Q ss_pred CCCCCCeeEEEeeccCCCCccchhhhh
Q 018722 299 DLHPGDHIEIQWRRNKEFPYGWWYGVV 325 (351)
Q Consensus 299 dLkPGDHIEIQWRrnkefPYgWWYgvV 325 (351)
.|+.||.|+|.=+-. .=|||+|-.
T Consensus 19 s~~~Gd~i~v~~~~~---~~~Ww~g~~ 42 (62)
T 2j6f_A 19 TIRVGEIIRNVKKLQ---EEGWLEGEL 42 (62)
T ss_dssp CBCTTCEEEEEEECS---STTEEEEEE
T ss_pred CCcCCCEEEEEEecC---CCCEEEEEE
Confidence 479999999986511 348999863
No 33
>2gnc_A SLIT-ROBO RHO GTPase-activating protein 1; beta barrel, signaling protein; 1.80A {Mus musculus}
Probab=62.50 E-value=3.3 Score=28.85 Aligned_cols=23 Identities=22% Similarity=0.631 Sum_probs=18.5
Q ss_pred CCCCCCeeEEEeeccCCCCccchhhhh
Q 018722 299 DLHPGDHIEIQWRRNKEFPYGWWYGVV 325 (351)
Q Consensus 299 dLkPGDHIEIQWRrnkefPYgWWYgvV 325 (351)
.++.||.|+|-=+.+. |||+|..
T Consensus 24 s~~~Gd~i~v~~~~~~----~Ww~g~~ 46 (60)
T 2gnc_A 24 SFKKGASLLLYHRASE----DWWEGRH 46 (60)
T ss_dssp CBCTTCEEEEEEEEET----TEEEEEE
T ss_pred CCCCCCEEEEEEecCC----CEEEEEE
Confidence 4799999999877543 8999865
No 34
>2dbk_A CRK-like protein; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=62.21 E-value=3.3 Score=31.21 Aligned_cols=22 Identities=27% Similarity=0.481 Sum_probs=17.4
Q ss_pred CCCCCCeeEEEeeccCCCCccchhhh
Q 018722 299 DLHPGDHIEIQWRRNKEFPYGWWYGV 324 (351)
Q Consensus 299 dLkPGDHIEIQWRrnkefPYgWWYgv 324 (351)
.|+.||.|+|-=+.+ =|||+|.
T Consensus 36 sf~~Gd~i~v~~~~~----~~Ww~g~ 57 (88)
T 2dbk_A 36 ALEVGDIVKVTRMNI----NGQWEGE 57 (88)
T ss_dssp CBCTTCEEEEEEECT----TSCEEEE
T ss_pred cCCCCCEEEEEEecC----CCEEEEE
Confidence 489999999986643 4899984
No 35
>2dl3_A Sorbin and SH3 domain-containing protein 1; ponsin, C-CBL-associated protein, CAP, SH3 domain protein 5 SH3P12, structural genomics, NPPSFA; NMR {Homo sapiens} PDB: 2dlm_A
Probab=62.21 E-value=3.5 Score=29.19 Aligned_cols=22 Identities=27% Similarity=0.493 Sum_probs=17.0
Q ss_pred CCCCCCeeEEEeeccCCCCccchhhh
Q 018722 299 DLHPGDHIEIQWRRNKEFPYGWWYGV 324 (351)
Q Consensus 299 dLkPGDHIEIQWRrnkefPYgWWYgv 324 (351)
.|+.||.|+|-=+.+ =|||+|.
T Consensus 25 s~~~Gd~i~v~~~~~----~~W~~g~ 46 (68)
T 2dl3_A 25 PLQKGDIVYIYKQID----QNWYEGE 46 (68)
T ss_dssp CBCTTCEEEEEECCS----TTEEEEE
T ss_pred cCCCCCEEEEeEecC----CCEEEEE
Confidence 479999999975432 3899996
No 36
>2oi3_A Tyrosine-protein kinase HCK; human HCK, SH3, SRC-type tyrosine kinase, transferase; NMR {Homo sapiens} PDB: 2oj2_A 4hck_A 5hck_A
Probab=62.19 E-value=3.8 Score=30.34 Aligned_cols=22 Identities=18% Similarity=0.543 Sum_probs=17.7
Q ss_pred CCCCCCeeEEEeeccCCCCccchhhhh
Q 018722 299 DLHPGDHIEIQWRRNKEFPYGWWYGVV 325 (351)
Q Consensus 299 dLkPGDHIEIQWRrnkefPYgWWYgvV 325 (351)
.++.||.|+|-=+. + |||+|..
T Consensus 43 s~~~Gd~i~v~~~~--~---~Ww~g~~ 64 (86)
T 2oi3_A 43 SFQKGDQMVVLEES--G---EWWKARS 64 (86)
T ss_dssp CCCTTCEEEEEEES--S---SEEEEEE
T ss_pred cCCCCCEEEEEEcC--C---CeEEEEE
Confidence 37999999997665 2 9999865
No 37
>2ekh_A SH3 and PX domain-containing protein 2A; SH3 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=62.09 E-value=3.6 Score=30.50 Aligned_cols=23 Identities=22% Similarity=0.705 Sum_probs=18.0
Q ss_pred CCCCCCeeEEEeeccCCCCccchhhhh
Q 018722 299 DLHPGDHIEIQWRRNKEFPYGWWYGVV 325 (351)
Q Consensus 299 dLkPGDHIEIQWRrnkefPYgWWYgvV 325 (351)
.|+.||.|+|--+.+ =|||+|-.
T Consensus 26 s~~~Gd~i~vl~~~~----~gWw~g~~ 48 (80)
T 2ekh_A 26 SFPAGVEVQVLEKQE----SGWWYVRF 48 (80)
T ss_dssp CBCTTCEEEEEEECT----TSEEEEEE
T ss_pred CcCCCCEEEEEEeCC----CCeEEEEE
Confidence 379999999986654 38999853
No 38
>1zuy_A Myosin-5 isoform; SH3 domain, contractIle protein; 1.39A {Saccharomyces cerevisiae} PDB: 1yp5_A
Probab=61.98 E-value=3.8 Score=27.95 Aligned_cols=24 Identities=38% Similarity=0.592 Sum_probs=18.8
Q ss_pred CCCCCCeeEEEeeccCCCCccchhhhhc
Q 018722 299 DLHPGDHIEIQWRRNKEFPYGWWYGVVG 326 (351)
Q Consensus 299 dLkPGDHIEIQWRrnkefPYgWWYgvVG 326 (351)
.++.||.|+|-=+. .=|||+|...
T Consensus 19 s~~~Gd~i~v~~~~----~~gW~~g~~~ 42 (58)
T 1zuy_A 19 PLKKGDVIYITREE----PSGWSLGKLL 42 (58)
T ss_dssp CBCTTCEEEEEEEC----TTSEEEEEES
T ss_pred CCCCCCEEEEEEec----CCCeEEEEEC
Confidence 47999999998665 3589998654
No 39
>1sem_A SEM-5; SRC-homology 3 (SH3) domain, peptide-binding protein; 2.00A {Caenorhabditis elegans} SCOP: b.34.2.1 PDB: 2sem_A 3sem_A 1k76_A 1kfz_A
Probab=61.31 E-value=3.9 Score=28.01 Aligned_cols=23 Identities=26% Similarity=0.673 Sum_probs=18.4
Q ss_pred CCCCCCeeEEEeeccCCCCccchhhhh
Q 018722 299 DLHPGDHIEIQWRRNKEFPYGWWYGVV 325 (351)
Q Consensus 299 dLkPGDHIEIQWRrnkefPYgWWYgvV 325 (351)
.++.||.|+|-=+.+ =|||+|..
T Consensus 20 s~~~Gd~i~v~~~~~----~~Ww~g~~ 42 (58)
T 1sem_A 20 AFKRGDVITLINKDD----PNWWEGQL 42 (58)
T ss_dssp CBCTTCEEEEEECSS----SSEEEEEE
T ss_pred CCCCCCEEEEEEecC----CCEEEEEE
Confidence 479999999987643 48999975
No 40
>1k4u_S Phagocyte NADPH oxidase subunit P67PHOX; SH3-peptide complex, helix-turn-helix, hormone/growth factor complex; NMR {Homo sapiens} SCOP: b.34.2.1
Probab=61.15 E-value=4 Score=28.51 Aligned_cols=22 Identities=27% Similarity=0.462 Sum_probs=17.5
Q ss_pred CCCCCCeeEEEeeccCCCCccchhhh
Q 018722 299 DLHPGDHIEIQWRRNKEFPYGWWYGV 324 (351)
Q Consensus 299 dLkPGDHIEIQWRrnkefPYgWWYgv 324 (351)
.|+.||.|+|-=+.+ =|||+|.
T Consensus 23 s~~~Gd~i~v~~~~~----~~Ww~g~ 44 (62)
T 1k4u_S 23 EFQEGDIILVLSKVN----EEWLEGE 44 (62)
T ss_dssp CBCSSCEEEEEEESS----SSCEEEE
T ss_pred cCCCCCEEEEEEeCC----CCEEEEE
Confidence 479999999986543 3899986
No 41
>2i0n_A Class VII unconventional myosin; beta-sheet loop, structural protein; NMR {Dictyostelium discoideum}
Probab=61.14 E-value=3.4 Score=30.65 Aligned_cols=23 Identities=22% Similarity=0.579 Sum_probs=17.8
Q ss_pred CCCCCCeeEEEeeccCCCCccchhhh
Q 018722 299 DLHPGDHIEIQWRRNKEFPYGWWYGV 324 (351)
Q Consensus 299 dLkPGDHIEIQWRrnkefPYgWWYgv 324 (351)
.|+.||.|+|-=+.+. -|||+|-
T Consensus 28 sf~~Gd~i~v~~~~~~---~gWw~g~ 50 (80)
T 2i0n_A 28 PFKRNDIITITFKDQE---NKWFMGQ 50 (80)
T ss_dssp CBCSSEEEEEEEESSS---SSEEEEE
T ss_pred CCCCCCEEEEEEecCC---CCEEEEE
Confidence 4799999999877642 3599985
No 42
>2dl8_A SLIT-ROBO RHO GTPase-activating protein 2; SH3 domain, formin-binding protein 2, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=60.64 E-value=3.6 Score=29.73 Aligned_cols=23 Identities=22% Similarity=0.593 Sum_probs=18.6
Q ss_pred CCCCCCeeEEEeeccCCCCccchhhhh
Q 018722 299 DLHPGDHIEIQWRRNKEFPYGWWYGVV 325 (351)
Q Consensus 299 dLkPGDHIEIQWRrnkefPYgWWYgvV 325 (351)
.|+.||.|+|-=+.+. |||+|..
T Consensus 27 s~~~Gd~i~v~~~~~~----~Ww~g~~ 49 (72)
T 2dl8_A 27 SFKKGASLLLYQRASD----DWWEGRH 49 (72)
T ss_dssp CBCTTCEEEEEEEEET----TEEEEEE
T ss_pred ccCCCCEEEEEeecCC----CEEEEEE
Confidence 4799999999877543 8999875
No 43
>1uti_A GRB2-related adaptor protein 2; signaling protein regulator, SH3 domain/complex, adaptor protein (MONA); 1.5A {Mus musculus} SCOP: b.34.2.1 PDB: 1h3h_A 1oeb_A 2w10_A 2d0n_A
Probab=60.22 E-value=4.2 Score=27.94 Aligned_cols=23 Identities=26% Similarity=0.682 Sum_probs=18.0
Q ss_pred CCCCCCeeEEEeeccCCCCccchhhhh
Q 018722 299 DLHPGDHIEIQWRRNKEFPYGWWYGVV 325 (351)
Q Consensus 299 dLkPGDHIEIQWRrnkefPYgWWYgvV 325 (351)
.++.||.|+|-=+.+ =|||+|..
T Consensus 19 s~~~Gd~i~v~~~~~----~~Ww~g~~ 41 (58)
T 1uti_A 19 GFRSGEVVEVLDSSN----PSWWTGRL 41 (58)
T ss_dssp CBCTTCEEEEEECCS----SSEEEEEE
T ss_pred CCCCCCEEEEEEECC----CCEEEEEE
Confidence 479999999976533 48999864
No 44
>1uj0_A Signal transducing adaptor molecule (SH3 domain and ITAM motif) 2; STAM, SH3, GRB2, GADS, PXXP, HRS, endocytosis, early endosome, signaling protein/signaling protein complex; 1.70A {Mus musculus} SCOP: b.34.2.1
Probab=60.21 E-value=4.1 Score=28.51 Aligned_cols=23 Identities=22% Similarity=0.554 Sum_probs=17.8
Q ss_pred CCCCCCeeEEEeeccCCCCccchhhhh
Q 018722 299 DLHPGDHIEIQWRRNKEFPYGWWYGVV 325 (351)
Q Consensus 299 dLkPGDHIEIQWRrnkefPYgWWYgvV 325 (351)
.++.||.|+|-=+.+ =|||+|-.
T Consensus 23 s~~~Gd~i~v~~~~~----~~Ww~g~~ 45 (62)
T 1uj0_A 23 TFKHGELITVLDDSD----ANWWQGEN 45 (62)
T ss_dssp CBCTTCEEEEEECCS----SSEEEEEE
T ss_pred CCCCCCEEEEEEeCC----CCEEEEEE
Confidence 479999999976533 48999864
No 45
>4f14_A Nebulette; SH3 domain, heart muscle, actin-binding protein-peptide COMP; 1.20A {Homo sapiens} PDB: 1ark_A 1neb_A 3i35_A
Probab=59.77 E-value=4.5 Score=27.97 Aligned_cols=23 Identities=35% Similarity=0.585 Sum_probs=17.8
Q ss_pred CCCCCCeeEEEeeccCCCCccchhhhh
Q 018722 299 DLHPGDHIEIQWRRNKEFPYGWWYGVV 325 (351)
Q Consensus 299 dLkPGDHIEIQWRrnkefPYgWWYgvV 325 (351)
.++.||.|+|-=+.+ =|||+|..
T Consensus 24 s~~~Gd~i~v~~~~~----~~W~~g~~ 46 (64)
T 4f14_A 24 SFRDGDYIVNVQPID----DGWMYGTV 46 (64)
T ss_dssp CBCTTCEEEEEEECS----SSEEEEEE
T ss_pred CCCCCCEEEEEEeCC----CCeEEEEE
Confidence 589999999865443 38999875
No 46
>1w70_A Neutrophil cytosol factor 4; NADPH oxidase, P40PHOX, P47PHOX, SH3 domain, polyproline; 1.46A {Homo sapiens} PDB: 1w6x_A
Probab=59.73 E-value=4.5 Score=28.15 Aligned_cols=23 Identities=35% Similarity=0.541 Sum_probs=18.2
Q ss_pred CCCCCCeeEEEeeccCCCCccchhhhh
Q 018722 299 DLHPGDHIEIQWRRNKEFPYGWWYGVV 325 (351)
Q Consensus 299 dLkPGDHIEIQWRrnkefPYgWWYgvV 325 (351)
.++.||.|+|-=+.+ =|||+|-.
T Consensus 22 s~~~Gd~i~v~~~~~----~~W~~g~~ 44 (60)
T 1w70_A 22 NFKAGDVIFLLSRIN----KDWLEGTV 44 (60)
T ss_dssp CBCTTCEEEEEEECS----SSEEEEEE
T ss_pred cCCCCCEEEEEEeCC----CCeEEEEE
Confidence 479999999987653 48999863
No 47
>3ulr_B SRC substrate cortactin; SH3, protein-protein interaction, hydrolase, protein binding; 1.65A {Mus musculus} SCOP: b.34.2.0 PDB: 2d1x_A
Probab=59.58 E-value=4 Score=28.47 Aligned_cols=22 Identities=36% Similarity=0.705 Sum_probs=17.1
Q ss_pred CCCCCCeeEEEeeccCCCCccchhhh
Q 018722 299 DLHPGDHIEIQWRRNKEFPYGWWYGV 324 (351)
Q Consensus 299 dLkPGDHIEIQWRrnkefPYgWWYgv 324 (351)
.++.||.|+|-=+.+ =|||.|.
T Consensus 27 s~~~Gd~i~v~~~~~----~~Ww~g~ 48 (65)
T 3ulr_B 27 SFDPDDIITNIEMID----DGWWRGV 48 (65)
T ss_dssp CBCTTCEEEEEECCS----SSEEEEE
T ss_pred eEecCCEEEEEEecC----CCEEEEE
Confidence 589999999975442 3899985
No 48
>2jw4_A Cytoplasmic protein NCK1; SH3 domain, phosphorylation, SH2 domain, signaling protein; NMR {Homo sapiens}
Probab=59.52 E-value=4.5 Score=29.31 Aligned_cols=21 Identities=14% Similarity=0.425 Sum_probs=16.9
Q ss_pred CCCCCCeeEEEeeccCCCCccchhhh
Q 018722 299 DLHPGDHIEIQWRRNKEFPYGWWYGV 324 (351)
Q Consensus 299 dLkPGDHIEIQWRrnkefPYgWWYgv 324 (351)
.|+.||.|+|-=+ + + |||+|-
T Consensus 25 s~~~Gd~i~v~~~---~-~-~Ww~g~ 45 (72)
T 2jw4_A 25 DIKKNERLWLLDD---S-K-SWWRVR 45 (72)
T ss_dssp CCCTTCEEEEEEC---S-S-SSEEEE
T ss_pred cCCCCCEEEEEEC---C-C-CEEEEE
Confidence 3799999999854 2 4 999996
No 49
>2lcs_A NAP1-binding protein 2; adaptor, transferase, signaling protein; NMR {Saccharomyces cerevisiae}
Probab=59.50 E-value=4.2 Score=29.86 Aligned_cols=23 Identities=26% Similarity=0.528 Sum_probs=17.5
Q ss_pred CCCCCCeeEEEeeccCCCCccchhhhh
Q 018722 299 DLHPGDHIEIQWRRNKEFPYGWWYGVV 325 (351)
Q Consensus 299 dLkPGDHIEIQWRrnkefPYgWWYgvV 325 (351)
.|+.||.|+|-=+.+ =|||+|..
T Consensus 23 s~~~Gd~i~v~~~~~----~gWw~g~~ 45 (73)
T 2lcs_A 23 RLAEGDIVFISYKHG----QGWLVAEN 45 (73)
T ss_dssp CBCTTCEEEEEEEET----TTEEEEEC
T ss_pred CCcCCCEEEEEEEcC----CCEEEEEE
Confidence 379999999965533 38999865
No 50
>2ew3_A SH3-containing GRB2-like protein 3; SH3GL3, solution structure, signaling protein; NMR {Homo sapiens}
Probab=59.11 E-value=4.5 Score=29.32 Aligned_cols=23 Identities=22% Similarity=0.585 Sum_probs=18.1
Q ss_pred CCCCCCeeEEEeeccCCCCccchhhhh
Q 018722 299 DLHPGDHIEIQWRRNKEFPYGWWYGVV 325 (351)
Q Consensus 299 dLkPGDHIEIQWRrnkefPYgWWYgvV 325 (351)
.|+.||.|+|-=+.+ =|||.|..
T Consensus 21 sf~~Gd~i~v~~~~~----~~Ww~g~~ 43 (68)
T 2ew3_A 21 GFKEGDIITLTNQID----ENWYEGMI 43 (68)
T ss_dssp CBCTTCEEEEEEESS----SSEEEEEE
T ss_pred CCCCCCEEEEEEecC----CCEEEEEE
Confidence 479999999987654 38999864
No 51
>2ke9_A Caskin-2; SH3 domain, ANK repeat, cytoplasm, phosphoprotein, protein binding; NMR {Homo sapiens}
Probab=59.06 E-value=3 Score=31.61 Aligned_cols=24 Identities=25% Similarity=0.516 Sum_probs=18.2
Q ss_pred CCCCCCeeEEEeeccCCCCccchhhhhc
Q 018722 299 DLHPGDHIEIQWRRNKEFPYGWWYGVVG 326 (351)
Q Consensus 299 dLkPGDHIEIQWRrnkefPYgWWYgvVG 326 (351)
.|+.||.|+|-=+.+ =|||+|.+.
T Consensus 37 sf~~GDiI~V~~~~~----~gWw~G~~~ 60 (83)
T 2ke9_A 37 NVRAGDVITVLEQHP----DGRWKGHIH 60 (83)
T ss_dssp CBCTTCEEEESCSSC----SSCEEEEEC
T ss_pred cccCCCEEEEEEecC----CCeEEEEEC
Confidence 379999999975543 379999753
No 52
>1b07_A Protein (proto-oncogene CRK (CRK)); SH3 domain, inhibitors, peptoids, protein-protein recognition, proline-rich motifs, signal transduction; 2.50A {Mus musculus} SCOP: b.34.2.1
Probab=58.64 E-value=4.5 Score=29.00 Aligned_cols=22 Identities=23% Similarity=0.584 Sum_probs=17.7
Q ss_pred CCCCCCeeEEEeeccCCCCccchhhh
Q 018722 299 DLHPGDHIEIQWRRNKEFPYGWWYGV 324 (351)
Q Consensus 299 dLkPGDHIEIQWRrnkefPYgWWYgv 324 (351)
.++.||.|+|-=+.+ =|||+|.
T Consensus 21 sf~~Gd~i~v~~~~~----~~Ww~g~ 42 (65)
T 1b07_A 21 PFKKGDILRIRDKPE----EQWWNAE 42 (65)
T ss_dssp CBCTTCEEEEEECSS----SSEEEEE
T ss_pred CCcCCCEEEEEEecC----CCeEEEE
Confidence 379999999986644 3899996
No 53
>1j3t_A Intersectin 2; beta barrel, SH3 domain, riken structural genomics/proteomics initiative, RSGI, structural genomics, endocytosis/exocytosis complex; NMR {Homo sapiens} SCOP: b.34.2.1
Probab=58.44 E-value=4.4 Score=29.41 Aligned_cols=22 Identities=27% Similarity=0.759 Sum_probs=17.5
Q ss_pred CCCCCCeeEEEeeccCCCCccchhhhh
Q 018722 299 DLHPGDHIEIQWRRNKEFPYGWWYGVV 325 (351)
Q Consensus 299 dLkPGDHIEIQWRrnkefPYgWWYgvV 325 (351)
.|+.||.|+|-=+. + |||+|..
T Consensus 28 s~~~Gd~i~v~~~~----~-~Ww~g~~ 49 (74)
T 1j3t_A 28 NFSKHDIITVLEQQ----E-NWWFGEV 49 (74)
T ss_dssp CBCTTCEEEEEEEC----S-SEEEEES
T ss_pred CCCCCCEEEEEecC----C-CEEEEEE
Confidence 47999999998662 2 8999864
No 54
>1zx6_A YPR154WP; SH3 domain, protein binding; 1.60A {Saccharomyces cerevisiae} PDB: 1ynz_A
Probab=58.18 E-value=5 Score=27.64 Aligned_cols=23 Identities=26% Similarity=0.656 Sum_probs=17.7
Q ss_pred CCCCCCeeEEEeeccCCCCccchhhhh
Q 018722 299 DLHPGDHIEIQWRRNKEFPYGWWYGVV 325 (351)
Q Consensus 299 dLkPGDHIEIQWRrnkefPYgWWYgvV 325 (351)
.++.||.|+|-=+.+ =|||+|..
T Consensus 20 s~~~Gd~i~v~~~~~----~~Ww~g~~ 42 (58)
T 1zx6_A 20 GLKPGDKVQLLEKLS----PEWYKGSC 42 (58)
T ss_dssp CBCTTCEEEEEEECS----SSEEEEEE
T ss_pred cCCCCCEEEEEEecC----CCEEEEEE
Confidence 479999999985432 48999874
No 55
>2eqi_A Phospholipase C, gamma 2; SH3 domain, PLCG2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}
Probab=58.07 E-value=2.5 Score=30.14 Aligned_cols=24 Identities=29% Similarity=0.614 Sum_probs=18.1
Q ss_pred CCCCCCeeEEEeeccCCCCccchhhhhc
Q 018722 299 DLHPGDHIEIQWRRNKEFPYGWWYGVVG 326 (351)
Q Consensus 299 dLkPGDHIEIQWRrnkefPYgWWYgvVG 326 (351)
.++.||.|+|-=+.+. |||+|..+
T Consensus 25 s~~~Gd~i~v~~~~~~----~Ww~g~~~ 48 (69)
T 2eqi_A 25 TFCRGALIHNVSKEPG----GWWKGDYG 48 (69)
T ss_dssp CBCTTCEEESCCCCSS----SCEEEEET
T ss_pred CCCCCCEEEEEEcCCC----CeEEEEEC
Confidence 3799999999765332 99999753
No 56
>2fpe_A C-JUN-amino-terminal kinase interacting protein 1; SRC-homology 3 (SH3) domain, all beta structure, signaling protein; HET: P6G; 1.75A {Rattus norvegicus} PDB: 2fpd_A*
Probab=57.75 E-value=4.9 Score=28.04 Aligned_cols=22 Identities=14% Similarity=0.330 Sum_probs=16.9
Q ss_pred CCCCCCeeEEEeeccCCCCccchhhh
Q 018722 299 DLHPGDHIEIQWRRNKEFPYGWWYGV 324 (351)
Q Consensus 299 dLkPGDHIEIQWRrnkefPYgWWYgv 324 (351)
.|+.||.|+|.-+. .=|||+|.
T Consensus 21 s~~~Gd~i~v~~~~----~~~W~~g~ 42 (62)
T 2fpe_A 21 ELEVDDPLLVELQA----EDYWYEAY 42 (62)
T ss_dssp CBCTTCEEEEEEEC----TTSEEEEE
T ss_pred cCCCCCEEEEEEec----CCCEEEEE
Confidence 47999999997332 35899985
No 57
>2yun_A Nostrin; nitric oxide synthase trafficker, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=57.51 E-value=4.8 Score=29.50 Aligned_cols=23 Identities=35% Similarity=0.978 Sum_probs=17.7
Q ss_pred CCCCCCeeEEEeeccCCCCccchhhhh
Q 018722 299 DLHPGDHIEIQWRRNKEFPYGWWYGVV 325 (351)
Q Consensus 299 dLkPGDHIEIQWRrnkefPYgWWYgvV 325 (351)
.|+.||.|+|--+.+ =|||+|..
T Consensus 25 s~~~Gd~i~v~~~~~----~~Ww~g~~ 47 (79)
T 2yun_A 25 NLEKGDIVIIHEKKE----EGWWFGSL 47 (79)
T ss_dssp CBCTTCEEEEEECCS----SSCEEEES
T ss_pred CCCCCCEEEEEEcCC----CCEEEEEE
Confidence 479999999975543 48999863
No 58
>2ct4_A CDC42-interacting protein 4; thyroid receptor interacting protein 10, SH3 domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=57.51 E-value=5 Score=28.63 Aligned_cols=24 Identities=13% Similarity=0.237 Sum_probs=17.9
Q ss_pred CCCCCCeeEEEeeccCCCCccchhhhh
Q 018722 299 DLHPGDHIEIQWRRNKEFPYGWWYGVV 325 (351)
Q Consensus 299 dLkPGDHIEIQWRrnkefPYgWWYgvV 325 (351)
.|+.||.|+|-=+.+ +-|||+|..
T Consensus 25 s~~~Gd~i~vl~~~~---~~gW~~~~~ 48 (70)
T 2ct4_A 25 SMAEGEDLSLMEEDK---GDGWTRVRR 48 (70)
T ss_dssp CBCTTCEEEEEECCS---SSCEEEEEC
T ss_pred CCCCCCEEEEEeccC---CCCeEEEEe
Confidence 379999999975433 458999864
No 59
>1x69_A Cortactin isoform A; SH3 domain, CTTN, oncogene EMS1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=57.49 E-value=5.5 Score=29.25 Aligned_cols=22 Identities=36% Similarity=0.705 Sum_probs=17.2
Q ss_pred CCCCCCeeEEEeeccCCCCccchhhh
Q 018722 299 DLHPGDHIEIQWRRNKEFPYGWWYGV 324 (351)
Q Consensus 299 dLkPGDHIEIQWRrnkefPYgWWYgv 324 (351)
.|+.||.|+|-=+.+ =|||+|.
T Consensus 35 s~~~Gd~i~v~~~~~----~~Ww~g~ 56 (79)
T 1x69_A 35 SFDPDDIITNIEMID----DGWWRGV 56 (79)
T ss_dssp CCCTTCEEEEEEECS----SSEEEEE
T ss_pred CcCCCCEEEEeEecC----CCeEEEE
Confidence 479999999985433 3899986
No 60
>2x3w_D Syndapin I, protein kinase C and casein kinase substrate in N protein 1; endocytosis, N-WAsp, dynamin, pacsin I, transferase; 2.64A {Mus musculus} PDB: 2x3x_D
Probab=57.31 E-value=3.8 Score=28.23 Aligned_cols=24 Identities=21% Similarity=0.491 Sum_probs=17.4
Q ss_pred CCCCCCeeEEEeeccCCCCccchhhhh
Q 018722 299 DLHPGDHIEIQWRRNKEFPYGWWYGVV 325 (351)
Q Consensus 299 dLkPGDHIEIQWRrnkefPYgWWYgvV 325 (351)
.++.||.|+|-=+.+ .=|||+|..
T Consensus 21 s~~~Gd~i~v~~~~~---~~~W~~g~~ 44 (60)
T 2x3w_D 21 SFKAGDELTKLGEED---EQGWCRGRL 44 (60)
T ss_dssp CBCTTCEEEECSCCC---SSSEEEEEC
T ss_pred cCCCCCEEEEEEccC---CCCceEEEe
Confidence 479999999954332 348999864
No 61
>2fpf_A C-JUN-amino-terminal kinase interacting protein 1; scaffold protein 1, islet-brain-1, IB-1, mitogen-activated P kinase 8-interacting protein 1; 3.00A {Rattus norvegicus}
Probab=57.10 E-value=5 Score=28.82 Aligned_cols=22 Identities=14% Similarity=0.330 Sum_probs=17.0
Q ss_pred CCCCCCeeEEEeeccCCCCccchhhh
Q 018722 299 DLHPGDHIEIQWRRNKEFPYGWWYGV 324 (351)
Q Consensus 299 dLkPGDHIEIQWRrnkefPYgWWYgv 324 (351)
.|+.||.|+|.=+. .=|||+|.
T Consensus 24 s~~~Gd~i~v~~~~----~~gW~~g~ 45 (71)
T 2fpf_A 24 ELEVDDPLLVELQA----EDYWYEAY 45 (71)
T ss_dssp CBCTTCEEEEEEEC----TTSEEEEE
T ss_pred cCcCCcEEEEeEec----CCCEEEEE
Confidence 47999999997332 36899996
No 62
>2vwf_A Growth factor receptor-bound protein 2; polymorphism, phosphoprotein, golgi apparatus, alternative splicing, HOST-virus interaction, SH3C, signaling; 1.58A {Homo sapiens} PDB: 2w0z_A 1gcq_A 1gfc_A 1gfd_A 1io6_A 2vvk_A
Probab=57.05 E-value=5.1 Score=27.40 Aligned_cols=23 Identities=26% Similarity=0.680 Sum_probs=18.0
Q ss_pred CCCCCCeeEEEeeccCCCCccchhhhh
Q 018722 299 DLHPGDHIEIQWRRNKEFPYGWWYGVV 325 (351)
Q Consensus 299 dLkPGDHIEIQWRrnkefPYgWWYgvV 325 (351)
.++.||.|+|-=+.+ =|||+|..
T Consensus 20 s~~~Gd~i~v~~~~~----~~Ww~g~~ 42 (58)
T 2vwf_A 20 GFRRGDFIHVMDNSD----PNWWKGAC 42 (58)
T ss_dssp CBCTTCEEEEEECCS----SSEEEEEE
T ss_pred CCCCCCEEEEEEcCC----CCEEEEEE
Confidence 378999999986543 48999865
No 63
>2oaw_A Spectrin alpha chain, brain; SH3 domain, chimera, structural protein; 1.90A {Gallus gallus} PDB: 2rot_A 2rmo_A 2kr3_A
Probab=56.75 E-value=5.1 Score=27.82 Aligned_cols=24 Identities=25% Similarity=0.515 Sum_probs=18.8
Q ss_pred CCCCCCeeEEEeeccCCCCccchhhhhc
Q 018722 299 DLHPGDHIEIQWRRNKEFPYGWWYGVVG 326 (351)
Q Consensus 299 dLkPGDHIEIQWRrnkefPYgWWYgvVG 326 (351)
.++.||.|+|-=+.+ =|||+|...
T Consensus 19 s~~~Gd~i~v~~~~~----~~Ww~g~~~ 42 (65)
T 2oaw_A 19 TMKKGDILTLLNSTN----KDWWKVEVK 42 (65)
T ss_dssp CBCTTCEEEEEECCS----SSEEEEEEE
T ss_pred CCCCCCEEEEEEcCC----CCEEEEEEc
Confidence 479999999987654 489998654
No 64
>2cuc_A SH3 domain containing ring finger 2; structural genomics, ring finger 2 containing protein, NPPSFA; NMR {Mus musculus}
Probab=56.72 E-value=4.7 Score=28.63 Aligned_cols=22 Identities=32% Similarity=0.671 Sum_probs=17.5
Q ss_pred CCCCCCeeEEEeeccCCCCccchhhh
Q 018722 299 DLHPGDHIEIQWRRNKEFPYGWWYGV 324 (351)
Q Consensus 299 dLkPGDHIEIQWRrnkefPYgWWYgv 324 (351)
.|+.||.|+|-=+.+ =|||+|.
T Consensus 25 s~~~Gd~i~v~~~~~----~~Ww~g~ 46 (70)
T 2cuc_A 25 DLQKGEGIRVLGKYQ----DGWLKGL 46 (70)
T ss_dssp CBCTTCEEEEEEEEE----TTEEEEE
T ss_pred CCCCCCEEEEEEecC----CCeEEEE
Confidence 379999999985543 3899986
No 65
>2ebp_A SAM and SH3 domain-containing protein 1; proline-glutamate repeat-containing protein, structural genomics, NPPSFA; NMR {Homo sapiens} PDB: 2kea_A
Probab=56.53 E-value=5 Score=29.40 Aligned_cols=22 Identities=41% Similarity=0.815 Sum_probs=17.5
Q ss_pred CCCCCCeeEEEeeccCCCCccchhhh
Q 018722 299 DLHPGDHIEIQWRRNKEFPYGWWYGV 324 (351)
Q Consensus 299 dLkPGDHIEIQWRrnkefPYgWWYgv 324 (351)
.|+.||.|+|-=+. .=|||+|-
T Consensus 29 s~~~Gd~i~v~~~~----~~gWw~g~ 50 (73)
T 2ebp_A 29 KLKKGDIIDIISKP----PMGTWMGL 50 (73)
T ss_dssp CBCSSCEEEEEECC----SSSCEEEE
T ss_pred CCCCCCEEEEEEeC----CCCeEEEE
Confidence 47999999998764 35899983
No 66
>3h0h_A Proto-oncogene tyrosine-protein kinase FYN; beta barrel, transferase; HET: PG4; 1.76A {Homo sapiens} SCOP: b.34.2.1 PDB: 3h0i_A 3h0f_A*
Probab=56.45 E-value=4.8 Score=28.79 Aligned_cols=23 Identities=22% Similarity=0.567 Sum_probs=17.9
Q ss_pred CCCCCCeeEEEeeccCCCCccchhhhh
Q 018722 299 DLHPGDHIEIQWRRNKEFPYGWWYGVV 325 (351)
Q Consensus 299 dLkPGDHIEIQWRrnkefPYgWWYgvV 325 (351)
.++.||.|+|-=+.+ =|||+|..
T Consensus 33 s~~~Gd~i~v~~~~~----~~Ww~g~~ 55 (73)
T 3h0h_A 33 SFHKGEKFQILNSSE----GDWWEARS 55 (73)
T ss_dssp CBCTTCEEEEEECSS----SSEEEEEE
T ss_pred eEeCCCEEEEEEecC----CCeEEEEE
Confidence 479999999976543 47999864
No 67
>1neg_A Spectrin alpha chain, brain; SH3-domain fold, five antiparallel beta sheets, structural protein; 2.30A {Gallus gallus} SCOP: b.34.2.1
Probab=56.17 E-value=5 Score=30.52 Aligned_cols=21 Identities=24% Similarity=0.582 Sum_probs=16.9
Q ss_pred CCCCCCeeEEEeeccCCCCccchhh
Q 018722 299 DLHPGDHIEIQWRRNKEFPYGWWYG 323 (351)
Q Consensus 299 dLkPGDHIEIQWRrnkefPYgWWYg 323 (351)
.|+.||.|+|-=+.+ =|||+|
T Consensus 35 sf~~Gd~i~Vl~~~~----~gWw~g 55 (83)
T 1neg_A 35 TMKKGDILTLLNSTN----KDWWKV 55 (83)
T ss_dssp CBCTTCEEEEEECCS----SSEEEE
T ss_pred ccCCCCEEEEEEecC----CCEEEE
Confidence 379999999986644 289998
No 68
>1g2b_A Spectrin alpha chain; capping protein, calcium-binding, duplication, repeat, SH3 domain, cytoskeleton, metal binding protein; 1.12A {Gallus gallus} SCOP: b.34.2.1 PDB: 1tud_A
Probab=56.03 E-value=23 Score=24.64 Aligned_cols=22 Identities=27% Similarity=0.578 Sum_probs=17.1
Q ss_pred CCCCCeeEEEeeccCCCCccchhhhh
Q 018722 300 LHPGDHIEIQWRRNKEFPYGWWYGVV 325 (351)
Q Consensus 300 LkPGDHIEIQWRrnkefPYgWWYgvV 325 (351)
++.||.|+|-=+.+ =|||.|-+
T Consensus 40 f~~Gd~i~v~~~~~----~~Ww~g~~ 61 (62)
T 1g2b_A 40 MKKGDILTLLNSTN----KDWWKVEV 61 (62)
T ss_dssp BCTTCEEEEEECCS----SSEEEEEE
T ss_pred CCCCCEEEEEEecC----CCEEEEEe
Confidence 79999999986543 37998843
No 69
>1csk_A C-SRC SH3 domain; phosphotransferase; 2.50A {Homo sapiens} SCOP: b.34.2.1
Probab=55.96 E-value=5.8 Score=28.38 Aligned_cols=23 Identities=17% Similarity=0.316 Sum_probs=17.2
Q ss_pred CCCCCCeeEEEeeccCCCCccchhhh
Q 018722 299 DLHPGDHIEIQWRRNKEFPYGWWYGV 324 (351)
Q Consensus 299 dLkPGDHIEIQWRrnkefPYgWWYgv 324 (351)
.++.||.|+|-=+... =|||+|.
T Consensus 29 s~~~Gd~i~v~~~~~~---~~Ww~g~ 51 (71)
T 1csk_A 29 PFCKGDVLTIVAVTKD---PNWYKAK 51 (71)
T ss_dssp CBCTTCEEEEEEECSS---TTEEEEE
T ss_pred CCCCCCEEEEeECCCC---CCCEEEE
Confidence 3799999999763322 4899996
No 70
>2dl4_A Protein STAC; SH3 domain, STAC protein, SRC homology 3, cysteine-rich domain protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=55.76 E-value=6 Score=28.24 Aligned_cols=22 Identities=36% Similarity=0.841 Sum_probs=17.5
Q ss_pred CCCCCCeeEEEeeccCCCCccchhhh
Q 018722 299 DLHPGDHIEIQWRRNKEFPYGWWYGV 324 (351)
Q Consensus 299 dLkPGDHIEIQWRrnkefPYgWWYgv 324 (351)
.|+.||.|+|-=+.+ =|||+|.
T Consensus 25 s~~~Gd~i~v~~~~~----~~Ww~g~ 46 (68)
T 2dl4_A 25 EMRPGDIITLLEDSN----EDWWKGK 46 (68)
T ss_dssp CCCTTCEEEEEECCC----SSEEEEE
T ss_pred CCCCCCEEEEEEeCC----CCEEEEE
Confidence 379999999986533 4899986
No 71
>1oot_A Hypothetical 40.4 kDa protein in PES4-His2 intergenic region; SH3 domain, sturctural genomics, structural genomics; 1.39A {Saccharomyces cerevisiae} SCOP: b.34.2.1 PDB: 1ssh_A 2a08_A
Probab=55.70 E-value=5.4 Score=27.54 Aligned_cols=25 Identities=32% Similarity=0.645 Sum_probs=18.4
Q ss_pred CCCCCCeeEEEeeccCCCCccchhhhh
Q 018722 299 DLHPGDHIEIQWRRNKEFPYGWWYGVV 325 (351)
Q Consensus 299 dLkPGDHIEIQWRrnkefPYgWWYgvV 325 (351)
.++.||.|+|-=+.. -.=|||+|..
T Consensus 21 s~~~Gd~i~v~~~~~--~~~~Ww~g~~ 45 (60)
T 1oot_A 21 PFRKGDVITILKKSD--SQNDWWTGRV 45 (60)
T ss_dssp CBCTTCEEEEEECCS--CTTSEEEEEE
T ss_pred eEcCCCEEEEEEeCC--CCCCeEEEEE
Confidence 379999999986642 1248999864
No 72
>2fei_A CD2-associated protein; CMS SH3 domain, structural protein; NMR {Homo sapiens}
Probab=55.44 E-value=3.7 Score=29.64 Aligned_cols=22 Identities=41% Similarity=0.857 Sum_probs=17.0
Q ss_pred CCCCCCeeEEEeeccCCCCccchhhh
Q 018722 299 DLHPGDHIEIQWRRNKEFPYGWWYGV 324 (351)
Q Consensus 299 dLkPGDHIEIQWRrnkefPYgWWYgv 324 (351)
.|+.||.|+|-=+. .=|||+|-
T Consensus 19 s~~~Gd~i~v~~~~----~~gWw~g~ 40 (65)
T 2fei_A 19 ELKVGDIIDINEEV----EEGWWSGT 40 (65)
T ss_dssp CCCTTCEEECCCCS----SSSEEEEE
T ss_pred CCCCCCEEEEEEec----CCCEEEEE
Confidence 47999999997442 35899995
No 73
>2v1q_A SLA1, cytoskeleton assembly control protein SLA1; structural genomics, phosphorylation, structural protein, yeast, SH3 domain; 1.2A {Saccharomyces cerevisiae} PDB: 1z9z_A
Probab=55.43 E-value=5.7 Score=27.25 Aligned_cols=24 Identities=21% Similarity=0.519 Sum_probs=17.5
Q ss_pred CCCCCCeeEEEeeccCCCCccchhhhh
Q 018722 299 DLHPGDHIEIQWRRNKEFPYGWWYGVV 325 (351)
Q Consensus 299 dLkPGDHIEIQWRrnkefPYgWWYgvV 325 (351)
.|+.||.|+|-=+. -.=|||+|..
T Consensus 20 s~~~Gd~i~v~~~~---~~~~Ww~g~~ 43 (60)
T 2v1q_A 20 TIKSGDKVYILDDK---KSKDWWMCQL 43 (60)
T ss_dssp CBCTTCEEEEEESS---SCSSEEEEEE
T ss_pred cCCCCCEEEEEeCC---CCCCCEEEEE
Confidence 37999999997542 1248999864
No 74
>2ecz_A Sorbin and SH3 domain-containing protein 1; glycoprotein, membrane, nuclear protein, phosphorylation, polymorphism, transport, structural genomics; NMR {Homo sapiens}
Probab=55.24 E-value=5 Score=28.56 Aligned_cols=24 Identities=17% Similarity=0.569 Sum_probs=18.4
Q ss_pred CCCCCCeeEEEeeccCCCCccchhhhhc
Q 018722 299 DLHPGDHIEIQWRRNKEFPYGWWYGVVG 326 (351)
Q Consensus 299 dLkPGDHIEIQWRrnkefPYgWWYgvVG 326 (351)
.|+.||.|+|-=+.+. |||+|...
T Consensus 25 s~~~Gd~i~v~~~~~~----~Ww~g~~~ 48 (70)
T 2ecz_A 25 SFRKGERITLLRQVDE----NWYEGRIP 48 (70)
T ss_dssp CCCTTCBCEEEEEEET----TEEEEEET
T ss_pred CCCCCCEEEEEEecCC----CeEEEEEC
Confidence 4799999999755432 89998754
No 75
>2ed0_A ABL interactor 2; coiled coil, cytoskeleton, nuclear protein, phosphorylation, SH3 domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=55.17 E-value=5.6 Score=29.24 Aligned_cols=22 Identities=27% Similarity=0.620 Sum_probs=17.6
Q ss_pred CCCCCCeeEEEeeccCCCCccchhhh
Q 018722 299 DLHPGDHIEIQWRRNKEFPYGWWYGV 324 (351)
Q Consensus 299 dLkPGDHIEIQWRrnkefPYgWWYgv 324 (351)
.|+.||.|+|-=+.+ =|||+|.
T Consensus 35 sf~~Gd~i~v~~~~~----~gWw~g~ 56 (78)
T 2ed0_A 35 SFQEGAIIYVIKKND----DGWYEGV 56 (78)
T ss_dssp CBCSSCEEEEEEECS----SSEEEEE
T ss_pred cccCCCEEEEEEeCC----CCEEEEE
Confidence 379999999986643 4899986
No 76
>2ct3_A Vinexin; SH3 domian, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=55.11 E-value=5 Score=28.47 Aligned_cols=23 Identities=30% Similarity=0.796 Sum_probs=18.1
Q ss_pred CCCCCCeeEEEeeccCCCCccchhhhh
Q 018722 299 DLHPGDHIEIQWRRNKEFPYGWWYGVV 325 (351)
Q Consensus 299 dLkPGDHIEIQWRrnkefPYgWWYgvV 325 (351)
.|+.||.|+|-=+.+ =|||+|..
T Consensus 25 s~~~Gd~i~v~~~~~----~gW~~g~~ 47 (70)
T 2ct3_A 25 ELREGDRVDVMQQCD----DGWFVGVS 47 (70)
T ss_dssp CBCTTEEEEEEEECS----SSCEEEEE
T ss_pred cCCCCCEEEEEEECC----CCEEEEEE
Confidence 479999999975543 58999976
No 77
>2drm_A Acanthamoeba myosin IB; SH3 domain, contractIle protein; 1.35A {Acanthamoeba} PDB: 2drk_A
Probab=54.99 E-value=5.7 Score=27.16 Aligned_cols=23 Identities=35% Similarity=0.907 Sum_probs=17.8
Q ss_pred CCCCCCeeEEEeeccCCCCccchhhhh
Q 018722 299 DLHPGDHIEIQWRRNKEFPYGWWYGVV 325 (351)
Q Consensus 299 dLkPGDHIEIQWRrnkefPYgWWYgvV 325 (351)
.++.||.|+|-=+. .=|||+|..
T Consensus 21 s~~~Gd~i~v~~~~----~~~W~~g~~ 43 (58)
T 2drm_A 21 TFKEGDTIIVHQKD----PAGWWEGEL 43 (58)
T ss_dssp CBCTTCEEEEEECC----TTSEEEEEE
T ss_pred CCCCCCEEEEEEec----CCCEEEEEE
Confidence 47999999997653 348999864
No 78
>1yn8_A NBP2, NAP1-binding protein 2; SH3 domain, unknown function; 1.70A {Saccharomyces cerevisiae}
Probab=54.79 E-value=5.4 Score=27.29 Aligned_cols=23 Identities=26% Similarity=0.528 Sum_probs=17.6
Q ss_pred CCCCCCeeEEEeeccCCCCccchhhhh
Q 018722 299 DLHPGDHIEIQWRRNKEFPYGWWYGVV 325 (351)
Q Consensus 299 dLkPGDHIEIQWRrnkefPYgWWYgvV 325 (351)
.|+.||.|+|-=+.+ =|||+|..
T Consensus 19 s~~~Gd~i~v~~~~~----~gW~~g~~ 41 (59)
T 1yn8_A 19 RLAEGDIVFISYKHG----QGWLVAEN 41 (59)
T ss_dssp CBCTTCEEEEEEEEE----TTEEEEEC
T ss_pred CCCCCCEEEEEEcCC----CCeEEEEE
Confidence 379999999965533 47999865
No 79
>1s1n_A Nephrocystin 1; beta barrel, cell adhesion; NMR {Homo sapiens}
Probab=54.75 E-value=3.5 Score=29.21 Aligned_cols=22 Identities=18% Similarity=0.619 Sum_probs=17.0
Q ss_pred CCCCCCeeEEEeeccCCCCccchhhh
Q 018722 299 DLHPGDHIEIQWRRNKEFPYGWWYGV 324 (351)
Q Consensus 299 dLkPGDHIEIQWRrnkefPYgWWYgv 324 (351)
.++.||.|+|-=+.+ =|||+|.
T Consensus 28 s~~~Gd~i~v~~~~~----~~Ww~g~ 49 (68)
T 1s1n_A 28 TFKKGEILLVIEKKP----DGWWIAK 49 (68)
T ss_dssp CBCSSEEEEECSCCS----SSEEEEE
T ss_pred CCCCCCEEEEEEcCC----CCeEEEE
Confidence 379999999975532 3899996
No 80
>2gqi_A RAS GTPase-activating protein 1; GAP, RAS P21 protein activator, P120GAP, rasgap, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=54.71 E-value=3.2 Score=29.97 Aligned_cols=22 Identities=18% Similarity=0.394 Sum_probs=16.9
Q ss_pred CCCCCCeeEEEeeccCCCCccchhhh
Q 018722 299 DLHPGDHIEIQWRRNKEFPYGWWYGV 324 (351)
Q Consensus 299 dLkPGDHIEIQWRrnkefPYgWWYgv 324 (351)
.|+.||.|+|-=+.+ =|||+|.
T Consensus 26 sf~~Gd~i~v~~~~~----~~W~~g~ 47 (71)
T 2gqi_A 26 SFLKGDMFIVHNELE----DGWMWVT 47 (71)
T ss_dssp CCCTTCBCCCCEECS----SSCEEEE
T ss_pred CCCCCCEEEEEEecC----CCEEEEE
Confidence 479999999975433 3899985
No 81
>1wie_A RIM binding protein 2; beta barrel, KIAA0318 protein, structural genomics, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.34.2.1
Probab=54.17 E-value=5.5 Score=30.64 Aligned_cols=23 Identities=17% Similarity=0.252 Sum_probs=17.4
Q ss_pred CCCCCCeeEEE-eeccCCCCccchhhhh
Q 018722 299 DLHPGDHIEIQ-WRRNKEFPYGWWYGVV 325 (351)
Q Consensus 299 dLkPGDHIEIQ-WRrnkefPYgWWYgvV 325 (351)
.|+.||.|+|- -+. .=|||+|..
T Consensus 41 sf~~Gd~i~v~~~~~----~~gWw~g~~ 64 (96)
T 1wie_A 41 PLTAGKYLYVYGDMD----EDGFYEGEL 64 (96)
T ss_dssp CCCTTCEEEEESSCC----SSSCCEEEE
T ss_pred eECCCCEEEEeEecC----CCCEEEEEE
Confidence 37999999997 433 348999875
No 82
>1x2q_A Signal transducing adapter molecule 2; SH3 domain, signal transducing adaptor molecule, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=54.16 E-value=6.2 Score=29.62 Aligned_cols=23 Identities=22% Similarity=0.507 Sum_probs=18.0
Q ss_pred CCCCCCeeEEEeeccCCCCccchhhhh
Q 018722 299 DLHPGDHIEIQWRRNKEFPYGWWYGVV 325 (351)
Q Consensus 299 dLkPGDHIEIQWRrnkefPYgWWYgvV 325 (351)
.|+.||.|+|-=+.+ =|||+|..
T Consensus 35 sf~~Gd~i~v~~~~~----~~Ww~g~~ 57 (88)
T 1x2q_A 35 TFKHGEIIIVLDDSD----ANWWKGEN 57 (88)
T ss_dssp CCCSSCEEEEEECSC----SSSEEEEE
T ss_pred CCCCCCEEEEEEeCC----CCEEEEEE
Confidence 479999999986533 48999965
No 83
>1gl5_A Tyrosine-protein kinase TEC; transferase, ATP-binding, SH3 domain, phosphorylation; NMR {Mus musculus} SCOP: b.34.2.1
Probab=53.77 E-value=6.1 Score=28.05 Aligned_cols=22 Identities=23% Similarity=0.527 Sum_probs=17.8
Q ss_pred CCCCCCeeEEEeeccCCCCccchhhh
Q 018722 299 DLHPGDHIEIQWRRNKEFPYGWWYGV 324 (351)
Q Consensus 299 dLkPGDHIEIQWRrnkefPYgWWYgv 324 (351)
.|+.||.|+|-=+.+ =|||+|.
T Consensus 20 s~~~Gd~i~v~~~~~----~~Ww~g~ 41 (67)
T 1gl5_A 20 RLERGQEYIILEKND----LHWWRAR 41 (67)
T ss_dssp CBCTTCEEEEEECSS----SSEEEEE
T ss_pred cCCcCCEEEEEEccC----CCcEEEE
Confidence 379999999987643 4899996
No 84
>2dmo_A Neutrophil cytosol factor 2; SH3 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=53.69 E-value=5.9 Score=28.26 Aligned_cols=22 Identities=18% Similarity=0.348 Sum_probs=17.1
Q ss_pred CCCCCCeeEEEeeccCCCCccchhhh
Q 018722 299 DLHPGDHIEIQWRRNKEFPYGWWYGV 324 (351)
Q Consensus 299 dLkPGDHIEIQWRrnkefPYgWWYgv 324 (351)
.|+.||.|+|-=+.+ =|||.|.
T Consensus 25 s~~~Gd~i~v~~~~~----~~Ww~g~ 46 (68)
T 2dmo_A 25 QVMPGNIVFVLKKGN----DNWATVM 46 (68)
T ss_dssp CCCTTCEEEECEECS----SSCEEEE
T ss_pred CCCCCCEEEEEEeCC----CCEEEEE
Confidence 479999999986544 3899883
No 85
>2dlp_A KIAA1783 protein; SH3 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=53.55 E-value=4.3 Score=30.34 Aligned_cols=25 Identities=28% Similarity=0.574 Sum_probs=17.9
Q ss_pred CCCCCCeeEEEeeccCCCCccchhhhh
Q 018722 299 DLHPGDHIEIQWRRNKEFPYGWWYGVV 325 (351)
Q Consensus 299 dLkPGDHIEIQWRrnkefPYgWWYgvV 325 (351)
.|+.||.|+|-=+. .--=|||+|..
T Consensus 26 sf~~Gd~i~v~~~~--~~~~~Ww~g~~ 50 (85)
T 2dlp_A 26 SFHRGDLIKLLPVA--TLEPGWQFGSA 50 (85)
T ss_dssp CBCTTCEEEECCCS--CCCTTEEEEES
T ss_pred cCcCCCEEEEEEcc--CCCCCeEEEEE
Confidence 47999999997651 12248999864
No 86
>2jt4_A Cytoskeleton assembly control protein SLA1; endocytosis, SH3, actin-binding, cytoplasm, cytoskeleton, phosphorylation, SH3 domain, DNA damage, DNA repair, nucleus; NMR {Saccharomyces cerevisiae}
Probab=53.37 E-value=6.3 Score=28.02 Aligned_cols=24 Identities=21% Similarity=0.576 Sum_probs=18.0
Q ss_pred CCCCCCeeEEEeeccCCCCccchhhhh
Q 018722 299 DLHPGDHIEIQWRRNKEFPYGWWYGVV 325 (351)
Q Consensus 299 dLkPGDHIEIQWRrnkefPYgWWYgvV 325 (351)
.|+.||.|+|-=+.. -=|||+|..
T Consensus 24 s~~~Gd~i~v~~~~~---~~~Ww~g~~ 47 (71)
T 2jt4_A 24 TIKSGDKVYILDDKK---SKDWWMCQL 47 (71)
T ss_dssp CBCTTCEEEEEESSS---CSSEEEEEE
T ss_pred cCCCCCEEEEEECCC---CCCCEEEEE
Confidence 379999999976431 348999975
No 87
>2a28_A BZZ1 protein; SH3 domain, signaling protein; 1.07A {Saccharomyces cerevisiae}
Probab=53.16 E-value=6.8 Score=26.54 Aligned_cols=24 Identities=33% Similarity=0.710 Sum_probs=18.5
Q ss_pred CCCCCCeeEEEeeccCCCCccchhhhh
Q 018722 299 DLHPGDHIEIQWRRNKEFPYGWWYGVV 325 (351)
Q Consensus 299 dLkPGDHIEIQWRrnkefPYgWWYgvV 325 (351)
.++.||.|+|-=+.+ .=|||+|..
T Consensus 18 s~~~Gd~i~v~~~~~---~~~W~~g~~ 41 (54)
T 2a28_A 18 SIDPGDIITVIRGDD---GSGWTYGEC 41 (54)
T ss_dssp CBCTTCEEEEEECCC---SSSEEEEEE
T ss_pred cCCCCCEEEEEEecC---CCCEEEEEE
Confidence 379999999986653 258999865
No 88
>1cka_A C-CRK N-terminal SH3 domain; complex (oncogene protein/peptide); 1.50A {Mus musculus} SCOP: b.34.2.1 PDB: 1ckb_A 1m3c_A 1m30_A 1m3b_A 1m3a_A
Probab=53.10 E-value=6.4 Score=26.89 Aligned_cols=22 Identities=23% Similarity=0.584 Sum_probs=17.6
Q ss_pred CCCCCCeeEEEeeccCCCCccchhhh
Q 018722 299 DLHPGDHIEIQWRRNKEFPYGWWYGV 324 (351)
Q Consensus 299 dLkPGDHIEIQWRrnkefPYgWWYgv 324 (351)
.++.||.|+|-=+.+ =|||+|.
T Consensus 19 s~~~Gd~i~v~~~~~----~~Ww~g~ 40 (57)
T 1cka_A 19 PFKKGDILRIRDKPE----EQWWNAE 40 (57)
T ss_dssp CBCTTCEEEEEECSS----SSEEEEE
T ss_pred CCCCCCEEEEEEecC----CCcEEEE
Confidence 379999999976543 4899996
No 89
>1hsq_A Phospholipase C-gamma (SH3 domain); phosphoric diester hydrolase; NMR {Homo sapiens} SCOP: b.34.2.1 PDB: 2hsp_A
Probab=52.37 E-value=3.1 Score=29.90 Aligned_cols=23 Identities=22% Similarity=0.452 Sum_probs=17.9
Q ss_pred CCCCCCeeEEEeeccCCCCccchhhhh
Q 018722 299 DLHPGDHIEIQWRRNKEFPYGWWYGVV 325 (351)
Q Consensus 299 dLkPGDHIEIQWRrnkefPYgWWYgvV 325 (351)
.|+.||.|+|-=+.+ =|||+|..
T Consensus 24 s~~~Gd~i~v~~~~~----~~Ww~g~~ 46 (71)
T 1hsq_A 24 TFIKSAIIQNVEKQE----GGWWRGDY 46 (71)
T ss_dssp CCCTTCCCBSCCCBT----TTEECCBC
T ss_pred CCCCCCEEEEEEecC----CCEEEEEE
Confidence 479999999976543 28999975
No 90
>2dbm_A SH3-containing GRB2-like protein 2; EC 2.3.1.-, SH3 domain protein 2A, endophilin 1, EEN-B1, structural genomics, NPPSFA; NMR {Homo sapiens} PDB: 2knb_B 3iql_A
Probab=52.22 E-value=4.1 Score=29.44 Aligned_cols=23 Identities=22% Similarity=0.566 Sum_probs=17.5
Q ss_pred CCCCCCeeEEEeeccCCCCccchhhhh
Q 018722 299 DLHPGDHIEIQWRRNKEFPYGWWYGVV 325 (351)
Q Consensus 299 dLkPGDHIEIQWRrnkefPYgWWYgvV 325 (351)
.|+.||.|+|-=+.+ =|||+|-.
T Consensus 25 s~~~Gd~i~v~~~~~----~~Ww~g~~ 47 (73)
T 2dbm_A 25 GFKEGDIITLTNQID----ENWYEGML 47 (73)
T ss_dssp CBCTTCEEECCBCSS----SSEEEEEE
T ss_pred cCCCCCEEEEEEecC----CCEEEEEE
Confidence 379999999976543 38999864
No 91
>3u23_A CD2-associated protein; structural genomics, structural genomics consortium, SGC, BE barrel, adaptor protein, protein binding; 1.11A {Homo sapiens} PDB: 2krn_A
Probab=52.22 E-value=6.2 Score=27.30 Aligned_cols=23 Identities=39% Similarity=0.867 Sum_probs=17.8
Q ss_pred CCCCCCeeEEEeeccCCCCccchhhhh
Q 018722 299 DLHPGDHIEIQWRRNKEFPYGWWYGVV 325 (351)
Q Consensus 299 dLkPGDHIEIQWRrnkefPYgWWYgvV 325 (351)
.++.||.|+|-=+.+ =|||+|..
T Consensus 25 s~~~Gd~i~v~~~~~----~~W~~g~~ 47 (65)
T 3u23_A 25 ELKVGDIIDINEEVE----EGWWSGTL 47 (65)
T ss_dssp CBCTTCEEEEEEEEE----TTEEEEEE
T ss_pred CCCCCCEEEEEEecC----CCEEEEEE
Confidence 589999999985533 37999873
No 92
>1ujy_A RHO guanine nucleotide exchange factor 6; structural genomics, SH3 domain, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.34.2.1
Probab=51.70 E-value=4.4 Score=29.49 Aligned_cols=23 Identities=30% Similarity=0.700 Sum_probs=17.7
Q ss_pred CCCCCCeeEEEeeccCCCCccchhhhh
Q 018722 299 DLHPGDHIEIQWRRNKEFPYGWWYGVV 325 (351)
Q Consensus 299 dLkPGDHIEIQWRrnkefPYgWWYgvV 325 (351)
.|+.||.|+|-=+.+ =|||+|..
T Consensus 28 s~~~Gd~i~v~~~~~----~~Ww~g~~ 50 (76)
T 1ujy_A 28 SVCKGDIIYVTRVEE----GGWWEGTL 50 (76)
T ss_dssp CBCSSCCEEESSCCS----SSCEEEEE
T ss_pred cCCCCCEEEEEEecC----CCEEEEEE
Confidence 479999999975433 48999864
No 93
>3cqt_A P59-FYN, proto-oncogene tyrosine-protein kinase FYN; beta barrel, ATP-binding, developmental protein, lipoprotein, manganese, metal-binding; 1.60A {Gallus gallus} PDB: 2l2p_A
Probab=51.65 E-value=6.6 Score=29.22 Aligned_cols=23 Identities=22% Similarity=0.567 Sum_probs=17.9
Q ss_pred CCCCCCeeEEEeeccCCCCccchhhhh
Q 018722 299 DLHPGDHIEIQWRRNKEFPYGWWYGVV 325 (351)
Q Consensus 299 dLkPGDHIEIQWRrnkefPYgWWYgvV 325 (351)
.|+.||.|+|-=+.+ =|||+|..
T Consensus 23 s~~~Gd~i~vl~~~~----~~Ww~g~~ 45 (79)
T 3cqt_A 23 SFHKGEKFQILNSSE----GDWWEARS 45 (79)
T ss_dssp CBCTTCEEEEEECTT----SSEEEEEE
T ss_pred CCCCCCEEEEEEecC----CCeEEEEE
Confidence 479999999975543 48999965
No 94
>2rqr_A CED-12 homolog, engulfment and cell motility protein 1, linker, D of cytokinesis protein 2; KIAA0209, KIAA0281, apoptosis, membrane, phagocytosis; NMR {Homo sapiens}
Probab=51.52 E-value=6.2 Score=31.84 Aligned_cols=22 Identities=32% Similarity=0.598 Sum_probs=17.7
Q ss_pred CCCCCCeeEEEeeccCCCCccchhhhh
Q 018722 299 DLHPGDHIEIQWRRNKEFPYGWWYGVV 325 (351)
Q Consensus 299 dLkPGDHIEIQWRrnkefPYgWWYgvV 325 (351)
.|+.||.|+|-=+ + + |||+|..
T Consensus 77 sf~~Gd~i~vl~~-~-~---gWw~g~~ 98 (119)
T 2rqr_A 77 SLQIGDVVRIQET-C-G---DWYRGYL 98 (119)
T ss_dssp CBCTTCEEEEEEE-E-T---TEEEEEE
T ss_pred cCcCCCEEEEEEc-C-C---CEEEEEE
Confidence 4799999999776 3 2 9999975
No 95
>1wyx_A CRK-associated substrate; beta sheets, cell adhesion; 1.14A {Homo sapiens}
Probab=51.24 E-value=6.5 Score=27.96 Aligned_cols=25 Identities=20% Similarity=0.482 Sum_probs=17.9
Q ss_pred CCCCCCeeEEEeeccCCCCccchhhh
Q 018722 299 DLHPGDHIEIQWRRNKEFPYGWWYGV 324 (351)
Q Consensus 299 dLkPGDHIEIQWRrnkefPYgWWYgv 324 (351)
.++.||.|+|-=+... ..=|||+|-
T Consensus 21 s~~~Gd~i~v~~~~~~-~~~~Ww~g~ 45 (69)
T 1wyx_A 21 SFRKGDIMTVLEQDTQ-GLDGWWLCS 45 (69)
T ss_dssp CBCTTCEEEEEETTGG-GCTTEEEEE
T ss_pred CCcCCCEEEEeECCCC-CCCCcEEEE
Confidence 4799999999765421 124899995
No 96
>2ege_A Uncharacterized protein KIAA1666; SH3 domain, KIAA1666 protein, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=51.23 E-value=6 Score=28.91 Aligned_cols=23 Identities=26% Similarity=0.559 Sum_probs=17.2
Q ss_pred CCCCCeeEEEeeccCCCCccchhhhh
Q 018722 300 LHPGDHIEIQWRRNKEFPYGWWYGVV 325 (351)
Q Consensus 300 LkPGDHIEIQWRrnkefPYgWWYgvV 325 (351)
|+.||.|+|-=+.. .=|||+|-.
T Consensus 33 f~~Gd~i~v~~~~~---~~gWw~g~~ 55 (75)
T 2ege_A 33 LRAGDVVMVYGPMD---DQGFYYGEL 55 (75)
T ss_dssp BCTTCEEEEESCCC---TTCEEEEES
T ss_pred ECCCCEEEEeEccC---CCCEEEEEE
Confidence 79999999974322 458999864
No 97
>4glm_A Dynamin-binding protein; SH3 domain, DNMBP, structural genomics, structural genomics consortium, SGC, SRC homology 3 domains, cell junctions; 1.90A {Homo sapiens}
Probab=51.14 E-value=7.3 Score=27.57 Aligned_cols=22 Identities=36% Similarity=0.593 Sum_probs=17.4
Q ss_pred CCCCCCeeEEEeeccCCCCccchhhh
Q 018722 299 DLHPGDHIEIQWRRNKEFPYGWWYGV 324 (351)
Q Consensus 299 dLkPGDHIEIQWRrnkefPYgWWYgv 324 (351)
.++.||.|+|-=+.+ =|||.|.
T Consensus 31 s~~~Gd~i~v~~~~~----~~W~~g~ 52 (72)
T 4glm_A 31 DFEVGDKIRILATLE----DGWLEGS 52 (72)
T ss_dssp CBCTTCEEEEEEECS----TTEEEEE
T ss_pred CCCCCCEEEEEEccC----CCEEEEE
Confidence 589999999985433 4799987
No 98
>2l0a_A STAM-1, signal transducing adapter molecule 1; structural genomics, northeast structural genomics consortiu PSI-2, protein structure initiative; NMR {Homo sapiens}
Probab=50.91 E-value=6.5 Score=29.15 Aligned_cols=23 Identities=22% Similarity=0.583 Sum_probs=17.9
Q ss_pred CCCCCCeeEEEeeccCCCCccchhhhh
Q 018722 299 DLHPGDHIEIQWRRNKEFPYGWWYGVV 325 (351)
Q Consensus 299 dLkPGDHIEIQWRrnkefPYgWWYgvV 325 (351)
.|+.||.|+|-=+.+ =|||+|-.
T Consensus 35 sf~~Gd~i~Vl~~~~----~gWw~g~~ 57 (72)
T 2l0a_A 35 TFKAGEIITVLDDSD----PNWWKGET 57 (72)
T ss_dssp CBCTTCEEEEEEEEE----TTEEEEEC
T ss_pred CCCCCCEEEEEEecC----CCEEEEEE
Confidence 479999999986543 38999864
No 99
>2cub_A Cytoplasmic protein NCK1; SH3 domain, NCK1 adaptor, tyrosine kinase, signal transduction, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=50.82 E-value=6.8 Score=29.57 Aligned_cols=23 Identities=26% Similarity=0.630 Sum_probs=18.5
Q ss_pred CCCCCCeeEEEeeccCCCCccchhhhh
Q 018722 299 DLHPGDHIEIQWRRNKEFPYGWWYGVV 325 (351)
Q Consensus 299 dLkPGDHIEIQWRrnkefPYgWWYgvV 325 (351)
.|+.||.|+|-=+.+ =|||+|..
T Consensus 35 s~~~Gd~i~v~~~~~----~gWw~g~~ 57 (88)
T 2cub_A 35 SLIKGTKVIVMEKCS----DGWWRGSY 57 (88)
T ss_dssp CCCTTEEEEEEEECT----TSEEEEEE
T ss_pred CCCCCCEEEEEEccC----CCeEEEEE
Confidence 489999999987653 38999864
No 100
>4e6r_A Cytoplasmic protein NCK2; SH3 domain, protein binding, structural genomics, joint CENT structural genomics, JCSG, protein structure initiative; HET: MLY; 2.20A {Homo sapiens} PDB: 2frw_A 2js0_A
Probab=50.70 E-value=7.7 Score=26.31 Aligned_cols=21 Identities=29% Similarity=0.746 Sum_probs=16.8
Q ss_pred CCCCCCeeEEEeeccCCCCccchhh
Q 018722 299 DLHPGDHIEIQWRRNKEFPYGWWYG 323 (351)
Q Consensus 299 dLkPGDHIEIQWRrnkefPYgWWYg 323 (351)
.|+.||.|+|-=+. .=|||+|
T Consensus 19 s~~~Gd~i~v~~~~----~~~W~~g 39 (58)
T 4e6r_A 19 SLVXGSRVTVMEXC----SDGWWRG 39 (58)
T ss_dssp CBCTTCEEEEEEEC----TTSEEEE
T ss_pred eEeCCCEEEEeEcC----CCCEEEE
Confidence 58999999997443 3489998
No 101
>3c0c_A Endophilin-A2; endocytosis, SH3, voltage-gated calcium channel, endosome, L binding, membrane, phosphoprotein, proto-oncogene, SH3 DOMA; 1.70A {Rattus norvegicus}
Probab=50.24 E-value=7.7 Score=28.03 Aligned_cols=23 Identities=22% Similarity=0.570 Sum_probs=18.1
Q ss_pred CCCCCCeeEEEeeccCCCCccchhhhh
Q 018722 299 DLHPGDHIEIQWRRNKEFPYGWWYGVV 325 (351)
Q Consensus 299 dLkPGDHIEIQWRrnkefPYgWWYgvV 325 (351)
.++.||.|+|-=+.+ =|||+|-.
T Consensus 31 s~~~Gd~i~v~~~~~----~~W~~g~~ 53 (73)
T 3c0c_A 31 GFREGDLITLTNQID----ENWYEGML 53 (73)
T ss_dssp CBCTTCEEEEEEECS----SSEEEEEE
T ss_pred cCcCCCEEEEEEecC----CCEEEEEE
Confidence 479999999987654 48999853
No 102
>2ed1_A 130 kDa phosphatidylinositol 4,5-biphosphate- dependent ARF1 GTPase-activating protein...; GTPase activation, membrane, metal-binding, SH3 domain; NMR {Homo sapiens} PDB: 2rqt_A 2rqu_A
Probab=49.58 E-value=5.5 Score=29.05 Aligned_cols=23 Identities=22% Similarity=0.580 Sum_probs=17.3
Q ss_pred CCCCCCeeEEEeeccCCCCccchhhhh
Q 018722 299 DLHPGDHIEIQWRRNKEFPYGWWYGVV 325 (351)
Q Consensus 299 dLkPGDHIEIQWRrnkefPYgWWYgvV 325 (351)
.++.||.|+|-=+. .=|||+|..
T Consensus 28 sf~~Gd~i~v~~~~----~~~Ww~g~~ 50 (76)
T 2ed1_A 28 TFIEGEVIIVTGEE----DQEWWIGHI 50 (76)
T ss_dssp CCCSSCEEEESSCC----SSSEEEEEE
T ss_pred CcCCCCEEEEEEec----CCCEEEEEE
Confidence 47999999996432 348999974
No 103
>2dl7_A KIAA0769 protein; SH3 domain, FCHSD2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=49.49 E-value=8.1 Score=27.83 Aligned_cols=25 Identities=28% Similarity=0.468 Sum_probs=17.9
Q ss_pred CCCCCCeeEEEeeccCCCCccchhhh
Q 018722 299 DLHPGDHIEIQWRRNKEFPYGWWYGV 324 (351)
Q Consensus 299 dLkPGDHIEIQWRrnkefPYgWWYgv 324 (351)
.|+.||.|+|-=+.+. -.=|||+|.
T Consensus 26 sf~~Gd~i~v~~~~~~-~~~~Ww~g~ 50 (73)
T 2dl7_A 26 SFPEGAIIRILNKENQ-DDDGFWEGE 50 (73)
T ss_dssp CBCTTCEEEEEECCCS-SSSSCEEEE
T ss_pred CCCCCCEEEEEECCCC-CCCCcEEEE
Confidence 4799999999865321 234899985
No 104
>2vkn_A Protein SSU81; membrane, SH3 domain, transmembrane, membrane; 2.05A {Saccharomyces cerevisiae}
Probab=49.19 E-value=6.1 Score=28.28 Aligned_cols=21 Identities=10% Similarity=0.368 Sum_probs=16.0
Q ss_pred CCCCCCeeEEEeeccCCCCccchhhh
Q 018722 299 DLHPGDHIEIQWRRNKEFPYGWWYGV 324 (351)
Q Consensus 299 dLkPGDHIEIQWRrnkefPYgWWYgv 324 (351)
.++.||.|+|-=+ -=|||+|.
T Consensus 25 sf~~Gd~i~v~~~-----~~~Ww~g~ 45 (70)
T 2vkn_A 25 SFEQNEILQVSDI-----EGRWWKAR 45 (70)
T ss_dssp CBCTTCEEEEECT-----TSSEEEEE
T ss_pred cCCCCCEEEEEEc-----CCCeEEEE
Confidence 3799999999632 24999994
No 105
>3eg3_A Proto-oncogene tyrosine-protein kinase ABL1; beta, ATP-binding, cell adhesion, cytoskeleton, LIPO magnesium, manganese, metal-binding, myristate; 1.40A {Homo sapiens} PDB: 3egu_A 3eg0_A 3eg2_A 3eg1_A 1abo_A 1abq_A 1ju5_C* 2o88_A 1bbz_A 1awo_A
Probab=48.12 E-value=9.2 Score=26.34 Aligned_cols=24 Identities=8% Similarity=0.254 Sum_probs=17.5
Q ss_pred CCCCCCeeEEEeeccCCCCccchhhhh
Q 018722 299 DLHPGDHIEIQWRRNKEFPYGWWYGVV 325 (351)
Q Consensus 299 dLkPGDHIEIQWRrnkefPYgWWYgvV 325 (351)
.++.||.|+|-=+... =+||.|..
T Consensus 23 s~~~Gd~i~v~~~~~~---~~W~~~~~ 46 (63)
T 3eg3_A 23 SITKGEKLRVLGYNHN---GEWCEAQT 46 (63)
T ss_dssp CBCTTCEEEEEEECTT---SSEEEEEE
T ss_pred CCCCCCEEEEEEeCCC---CCeEEEEE
Confidence 5899999999765322 26998854
No 106
>2m0y_A Dedicator of cytokinesis protein 1; apoptosis; NMR {Mus musculus}
Probab=47.87 E-value=5 Score=28.75 Aligned_cols=22 Identities=32% Similarity=0.587 Sum_probs=17.3
Q ss_pred CCCCCCeeEEEeeccCCCCccchhhhh
Q 018722 299 DLHPGDHIEIQWRRNKEFPYGWWYGVV 325 (351)
Q Consensus 299 dLkPGDHIEIQWRrnkefPYgWWYgvV 325 (351)
.|+.||.|+|-=+ + =|||+|..
T Consensus 29 s~~~Gd~i~v~~~---~--~~W~~g~~ 50 (74)
T 2m0y_A 29 SLQIGDTVHILET---Y--EGWYRGYT 50 (74)
T ss_dssp CEETTEEEEEEEB---S--SSCEEEEE
T ss_pred cCCCCCEEEEEEc---C--CCeEEEEE
Confidence 5899999999754 2 38999864
No 107
>1x6b_A RHO guanine exchange factor (GEF) 16; SH3 domain, neuroblastoma, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=47.45 E-value=7 Score=28.76 Aligned_cols=22 Identities=27% Similarity=0.548 Sum_probs=17.9
Q ss_pred CCCCCCeeEEEeeccCCCCccchhhhh
Q 018722 299 DLHPGDHIEIQWRRNKEFPYGWWYGVV 325 (351)
Q Consensus 299 dLkPGDHIEIQWRrnkefPYgWWYgvV 325 (351)
.|+.||.|+|-=+ .=|||+|..
T Consensus 35 s~~~Gd~i~v~~~-----~~gW~~g~~ 56 (79)
T 1x6b_A 35 TLQQADVVLVLQQ-----EDGWLYGER 56 (79)
T ss_dssp CCCTTEEEEEEEE-----ETTEEEEEE
T ss_pred CCCCCCEEEEEEe-----CCCEEEEEE
Confidence 4799999999765 358999975
No 108
>1w1f_A Tyrosine-protein kinase LYN; SH3-domain, SH3 domain, tyrosine kinase, signal transduction; NMR {Homo sapiens} PDB: 1wa7_A
Probab=46.96 E-value=8.9 Score=26.74 Aligned_cols=22 Identities=14% Similarity=0.510 Sum_probs=17.8
Q ss_pred CCCCCCeeEEEeeccCCCCccchhhhh
Q 018722 299 DLHPGDHIEIQWRRNKEFPYGWWYGVV 325 (351)
Q Consensus 299 dLkPGDHIEIQWRrnkefPYgWWYgvV 325 (351)
.++.||.|+|-=+. =|||+|..
T Consensus 25 s~~~Gd~i~v~~~~-----~~Ww~g~~ 46 (65)
T 1w1f_A 25 SFKKGEKMKVLEEH-----GEWWKAKS 46 (65)
T ss_dssp CBCTTCEEEEEEEC-----SSEEEEEE
T ss_pred CCCCCCEEEEEEcC-----CCEEEEEE
Confidence 37999999997654 58999865
No 109
>1aww_A ATK, AMGX1, BPK, bruton'S tyrosine kinase; X-linked agammaglobulinemia, XLA, BTK, SH3 domain, transferase; NMR {Homo sapiens} SCOP: b.34.2.1 PDB: 1awx_A 1qly_A
Probab=46.43 E-value=6.5 Score=27.80 Aligned_cols=22 Identities=32% Similarity=0.570 Sum_probs=17.1
Q ss_pred CCCCCCeeEEEeeccCCCCccchhhh
Q 018722 299 DLHPGDHIEIQWRRNKEFPYGWWYGV 324 (351)
Q Consensus 299 dLkPGDHIEIQWRrnkefPYgWWYgv 324 (351)
.|+.||.|+|-=+.+ =|||+|.
T Consensus 26 s~~~Gd~i~v~~~~~----~~Ww~g~ 47 (67)
T 1aww_A 26 QLRKGDEYFILEESN----LPWWRAR 47 (67)
T ss_dssp CCCSSCEEECCCCCS----SSEECCB
T ss_pred cCCCCCEEEEEEccC----CCcEEEE
Confidence 379999999975543 4799996
No 110
>3reb_B Tyrosine-protein kinase HCK; HIV-1 NEF, SH3 domain binding, signaling, HCK SH3 domain, PR binding; 3.45A {Homo sapiens}
Probab=46.08 E-value=8.6 Score=28.78 Aligned_cols=22 Identities=18% Similarity=0.512 Sum_probs=17.2
Q ss_pred CCCCCCeeEEEeeccCCCCccchhhhh
Q 018722 299 DLHPGDHIEIQWRRNKEFPYGWWYGVV 325 (351)
Q Consensus 299 dLkPGDHIEIQWRrnkefPYgWWYgvV 325 (351)
.++.||.|+|-=+ + =|||.|-.
T Consensus 21 s~~~Gd~i~v~~~-~----~~Ww~g~~ 42 (90)
T 3reb_B 21 SFQKGDQMVVLEE-S----GEWWKARS 42 (90)
T ss_dssp CBCTTCEEEEEEC-S----SSEEEEEE
T ss_pred CCCCCCEEEEEEe-C----CCEEEEEE
Confidence 5899999999754 2 28999864
No 111
>2b86_A Cytoplasmic protein NCK2; NCK SH3 domain, signaling protein; NMR {Homo sapiens} PDB: 2js2_A
Probab=45.53 E-value=9.5 Score=27.79 Aligned_cols=21 Identities=14% Similarity=0.402 Sum_probs=16.7
Q ss_pred CCCCCCeeEEEeeccCCCCccchhhh
Q 018722 299 DLHPGDHIEIQWRRNKEFPYGWWYGV 324 (351)
Q Consensus 299 dLkPGDHIEIQWRrnkefPYgWWYgv 324 (351)
.++.||.|+|-=+ + . |||+|.
T Consensus 22 sf~~Gd~i~vl~~---~-~-~Ww~~~ 42 (67)
T 2b86_A 22 DIKKNERLWLLDD---S-K-TWWRVR 42 (67)
T ss_dssp CBCTTCEEEEEEC---S-S-SSCEEE
T ss_pred ccCCCCEEEEEec---C-C-CeEEEE
Confidence 3799999999855 2 3 999985
No 112
>2yuo_A CIP85, RUN and TBC1 domain containing 3; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}
Probab=45.46 E-value=9.6 Score=27.76 Aligned_cols=22 Identities=23% Similarity=0.407 Sum_probs=16.9
Q ss_pred CCCCCCeeEEEeeccCCCCccchhhh
Q 018722 299 DLHPGDHIEIQWRRNKEFPYGWWYGV 324 (351)
Q Consensus 299 dLkPGDHIEIQWRrnkefPYgWWYgv 324 (351)
.|+.||.|+|-=+.+ =|||+|-
T Consensus 25 s~~~Gd~i~v~~~~~----~~Ww~g~ 46 (78)
T 2yuo_A 25 GFRKNDIITIISQKD----EHCWVGE 46 (78)
T ss_dssp CBCTTCEEEEEECCS----SSEEEEE
T ss_pred cCCCCCEEEEEEecC----CCEEEEE
Confidence 479999999985443 3899875
No 113
>2xmf_A Myosin 1E SH3; motor protein, SH3 domain; HET: DIA; 1.50A {Mus musculus}
Probab=45.34 E-value=10 Score=26.16 Aligned_cols=23 Identities=30% Similarity=0.710 Sum_probs=18.2
Q ss_pred CCCCCCeeEEEeeccCCCCccchhhhh
Q 018722 299 DLHPGDHIEIQWRRNKEFPYGWWYGVV 325 (351)
Q Consensus 299 dLkPGDHIEIQWRrnkefPYgWWYgvV 325 (351)
.++.||.|+|-=+.+ =|||+|..
T Consensus 23 s~~~Gd~i~v~~~~~----~~Ww~g~~ 45 (60)
T 2xmf_A 23 SFNANDIIDIIKEDP----SGWWTGRL 45 (60)
T ss_dssp CBCTTCEEEEEEECT----TSEEEEEE
T ss_pred CCCCCCEEEEEEecC----CCEEEEEE
Confidence 479999999976543 58999965
No 114
>2csq_A RIM-BP2, RIM binding protein 2; SH3 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=45.27 E-value=9.3 Score=29.29 Aligned_cols=24 Identities=17% Similarity=0.398 Sum_probs=18.5
Q ss_pred CCCCCCeeEEEeeccCCCCccchhhhh
Q 018722 299 DLHPGDHIEIQWRRNKEFPYGWWYGVV 325 (351)
Q Consensus 299 dLkPGDHIEIQWRrnkefPYgWWYgvV 325 (351)
.|+.||.|+|-=+.+ .-|||+|-.
T Consensus 43 sf~~Gd~i~vl~~~~---~~gWw~g~~ 66 (97)
T 2csq_A 43 PFKEGQIIKVYGDKD---ADGFYRGET 66 (97)
T ss_dssp CBCTTCEEEEEEEEC---TTCEEEEEE
T ss_pred CCCCCCEEEEEEecC---CCCeEEEEE
Confidence 479999999985443 458999865
No 115
>2ega_A SH3 and PX domain-containing protein 2A; SH3 domain, KIAA0418 protein, SH3MD1, SH3 multiple domains 1, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=45.05 E-value=9.9 Score=27.06 Aligned_cols=22 Identities=23% Similarity=0.815 Sum_probs=17.8
Q ss_pred CCCCCCeeEEEeeccCCCCccchhhh
Q 018722 299 DLHPGDHIEIQWRRNKEFPYGWWYGV 324 (351)
Q Consensus 299 dLkPGDHIEIQWRrnkefPYgWWYgv 324 (351)
.|+.||.|+|-=+.+ =|||+|-
T Consensus 26 s~~~Gd~i~v~~~~~----~~Ww~g~ 47 (70)
T 2ega_A 26 SLQAGEVVDVIEKNE----SGWWFVS 47 (70)
T ss_dssp CCCTTCBCEEEEECT----TSEEEEE
T ss_pred cCCCCCEEEEEEccC----CCeEEEE
Confidence 479999999987643 5899985
No 116
>2rf0_A Mitogen-activated protein kinase kinase kinase 10; MAP3K10, MLK2, SH3 domain, TKL kinase, MKN28, structural GEN structural genomics consortium, SGC; 2.00A {Homo sapiens}
Probab=45.04 E-value=11 Score=29.05 Aligned_cols=27 Identities=26% Similarity=0.582 Sum_probs=18.6
Q ss_pred CCCCCCeeEEEeeccCC-CCccchhhhh
Q 018722 299 DLHPGDHIEIQWRRNKE-FPYGWWYGVV 325 (351)
Q Consensus 299 dLkPGDHIEIQWRrnke-fPYgWWYgvV 325 (351)
.|+.||.|+|-=+.... --=|||+|..
T Consensus 47 sf~~GD~I~Vl~~~~~~~~~~gWw~g~~ 74 (89)
T 2rf0_A 47 TLRRGDRVQVLSQDCAVSGDEGWWTGQL 74 (89)
T ss_dssp CBCTTCEEEEEECCHHHHSSTTEEEEEC
T ss_pred ccCCCCEEEEEeccCCcccCCCEEEEEE
Confidence 47999999998763100 0238999975
No 117
>1ue9_A Intersectin 2; beta barrel, SH3 domain, riken structural genomics/proteomics initiative, RSGI, structural genomics, endocytosis/exocytosis complex; NMR {Homo sapiens} SCOP: b.34.2.1
Probab=44.93 E-value=11 Score=27.42 Aligned_cols=24 Identities=38% Similarity=0.797 Sum_probs=19.1
Q ss_pred CCCCCCeeEEEeeccCCCCccchhhhhc
Q 018722 299 DLHPGDHIEIQWRRNKEFPYGWWYGVVG 326 (351)
Q Consensus 299 dLkPGDHIEIQWRrnkefPYgWWYgvVG 326 (351)
.|+.||.|+|-=+.+ =|||+|...
T Consensus 25 s~~~Gd~i~v~~~~~----~gWw~g~~~ 48 (80)
T 1ue9_A 25 SLAPGQLILILKKNT----SGWWQGELQ 48 (80)
T ss_dssp CCCTTCEEEEEEECS----SSEEEEEEC
T ss_pred CCCCCCEEEEEEecC----CCcEEEEEC
Confidence 489999999986643 489999764
No 118
>1udl_A Intersectin 2, KIAA1256; beta barrel, SH3 domain, riken structural genomics/proteomics initiative, RSGI, structural genomics; NMR {Homo sapiens} SCOP: b.34.2.1
Probab=44.33 E-value=9.6 Score=29.11 Aligned_cols=22 Identities=23% Similarity=0.662 Sum_probs=17.3
Q ss_pred CCCCCCeeEEEeeccCCCCccchhhh
Q 018722 299 DLHPGDHIEIQWRRNKEFPYGWWYGV 324 (351)
Q Consensus 299 dLkPGDHIEIQWRrnkefPYgWWYgv 324 (351)
.|+.||.|+|.=+.+ =|||+|.
T Consensus 52 s~~~Gd~i~v~~~~~----~~Ww~g~ 73 (98)
T 1udl_A 52 SFSKGQLINVMNKDD----PDWWQGE 73 (98)
T ss_dssp CCCTTCEEEECBCCS----SSEEBCB
T ss_pred CCcCCCEEEEEEecC----CCEEEEE
Confidence 479999999976543 4899985
No 119
>2jxb_A T-cell surface glycoprotein CD3 epsilon chain, cytoplasmic protein NCK2; T-cell receptor, SH3 domain, immunology, SH2 domain; NMR {Homo sapiens}
Probab=44.08 E-value=9.6 Score=28.61 Aligned_cols=21 Identities=14% Similarity=0.389 Sum_probs=16.7
Q ss_pred CCCCCCeeEEEeeccCCCCccchhhh
Q 018722 299 DLHPGDHIEIQWRRNKEFPYGWWYGV 324 (351)
Q Consensus 299 dLkPGDHIEIQWRrnkefPYgWWYgv 324 (351)
.|+.||.|+|-=+ + =|||+|.
T Consensus 49 s~~~Gd~i~v~~~-~----~~Ww~g~ 69 (86)
T 2jxb_A 49 DIKKNERLWLLDD-S----KTWWRVR 69 (86)
T ss_dssp CCCTTEEEEEEEC-C----SSEEEEE
T ss_pred ccCCCCEEEEEec-C----CCeEEEE
Confidence 3799999999864 2 2999985
No 120
>4dot_A Group XVI phospholipase A2; alpha/beta fold, phospholipase/acyltransferase, phosphatidyl phosphatidylethanolamine, membrane, hydrolase; 1.96A {Homo sapiens}
Probab=43.30 E-value=10 Score=32.36 Aligned_cols=13 Identities=46% Similarity=0.741 Sum_probs=11.1
Q ss_pred cCCCCCCCeeEEE
Q 018722 297 LNDLHPGDHIEIQ 309 (351)
Q Consensus 297 l~dLkPGDHIEIQ 309 (351)
-.+|+|||+|+++
T Consensus 5 ~~~~~pGDlv~~~ 17 (140)
T 4dot_A 5 IPEPKPGDLIEIF 17 (140)
T ss_dssp -CCCCTTCEEEEE
T ss_pred ccCCCCCCEEEEe
Confidence 3689999999997
No 121
>1z9q_A Neutrophil cytosol factor 4; oxidoreductase activator; NMR {Homo sapiens}
Probab=43.24 E-value=6.1 Score=29.94 Aligned_cols=23 Identities=35% Similarity=0.541 Sum_probs=18.0
Q ss_pred CCCCCCeeEEEeeccCCCCccchhhhh
Q 018722 299 DLHPGDHIEIQWRRNKEFPYGWWYGVV 325 (351)
Q Consensus 299 dLkPGDHIEIQWRrnkefPYgWWYgvV 325 (351)
.|+.||.|+|-=+.+ =|||+|-.
T Consensus 36 sf~~Gd~I~Vl~~~~----~gWw~g~~ 58 (79)
T 1z9q_A 36 NFKAGDVIFLLSRIN----KDWLEGTV 58 (79)
T ss_dssp CCCTTCCBCCCEESS----SSEEEEEE
T ss_pred cccCCCEEEEeEecC----CCEEEEEE
Confidence 479999999976643 48999863
No 122
>3ngp_A Spectrin alpha chain, brain; beta barrel, structural protein; 1.08A {Gallus gallus} PDB: 1e7o_A 1e6g_A 1e6h_A 1uue_A 1h8k_A 2lj3_A 1aey_A 1m8m_A 1shg_A 1u06_A 2nuz_A 2cdt_A 1hd3_A 2f2v_A 2f2w_A 2jm8_A 2jm9_A 2jma_A 3m0r_A 3m0p_A ...
Probab=42.91 E-value=12 Score=25.70 Aligned_cols=22 Identities=23% Similarity=0.493 Sum_probs=17.7
Q ss_pred CCCCCCeeEEEeeccCCCCccchhhh
Q 018722 299 DLHPGDHIEIQWRRNKEFPYGWWYGV 324 (351)
Q Consensus 299 dLkPGDHIEIQWRrnkefPYgWWYgv 324 (351)
.++.||.|+|-=+.+ =|||+|-
T Consensus 24 s~~~Gd~i~v~~~~~----~~Ww~~~ 45 (62)
T 3ngp_A 24 TVKKGDILTLLNSTN----KDWWKIE 45 (62)
T ss_dssp CBCTTCEEEEEECCS----SSEEEEE
T ss_pred cCCCCCEEEEeEecC----CCeEEEE
Confidence 589999999977654 4799984
No 123
>2pqh_A Spectrin alpha chain, brain; SH3 domain, chimera, , structural protein; 1.75A {Gallus gallus}
Probab=42.50 E-value=11 Score=27.70 Aligned_cols=23 Identities=26% Similarity=0.553 Sum_probs=18.3
Q ss_pred CCCCCCeeEEEeeccCCCCccchhhhh
Q 018722 299 DLHPGDHIEIQWRRNKEFPYGWWYGVV 325 (351)
Q Consensus 299 dLkPGDHIEIQWRrnkefPYgWWYgvV 325 (351)
.|+.||.|+|-=+.+ =|||+|..
T Consensus 20 s~~~Gd~i~v~~~~~----~~Ww~g~~ 42 (80)
T 2pqh_A 20 TMKKGDILTLLNSTN----KDWWKVEV 42 (80)
T ss_dssp CBCTTCEEEEEECCS----SSEEEEEE
T ss_pred CCCCCCEEEEEEecC----CCEEEEEE
Confidence 479999999987654 47999864
No 124
>2yt6_A Adult MALE urinary bladder cDNA, riken FULL- length enriched library, clone:9530076O17...; SH3_1 domain; NMR {Mus musculus}
Probab=42.33 E-value=12 Score=28.74 Aligned_cols=23 Identities=17% Similarity=0.492 Sum_probs=17.8
Q ss_pred CCCCCCeeEEEeeccCCCCccchhhhh
Q 018722 299 DLHPGDHIEIQWRRNKEFPYGWWYGVV 325 (351)
Q Consensus 299 dLkPGDHIEIQWRrnkefPYgWWYgvV 325 (351)
.|+.||.|+|-=+.+ =|||+|..
T Consensus 45 s~~~Gd~i~v~~~~~----~~Ww~g~~ 67 (109)
T 2yt6_A 45 SFKKGERFQIINNTE----GDWWEARS 67 (109)
T ss_dssp CCCTTCEEEEEECSC----TTCEEEEE
T ss_pred CCCCCCEEEEEEccC----CCcEEEEE
Confidence 479999999975543 48999864
No 125
>1wi7_A SH3-domain kinase binding protein 1; beta barrel, SH3KBP1, RUK, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus}
Probab=42.18 E-value=5.9 Score=28.12 Aligned_cols=22 Identities=45% Similarity=0.889 Sum_probs=17.0
Q ss_pred CCCCCCeeEEEeeccCCCCccchhhh
Q 018722 299 DLHPGDHIEIQWRRNKEFPYGWWYGV 324 (351)
Q Consensus 299 dLkPGDHIEIQWRrnkefPYgWWYgv 324 (351)
.|+.||.|+|-=+.+ =|||+|.
T Consensus 25 s~~~Gd~i~v~~~~~----~~Ww~g~ 46 (68)
T 1wi7_A 25 ELKVGDIIEVVGEVE----EGWWEGV 46 (68)
T ss_dssp CBCTTCEECCCEEEE----TTEEEEC
T ss_pred cCcCCCEEEEEEcCC----CCeEEEE
Confidence 479999999975533 4899986
No 126
>4gjz_A Lysine-specific demethylase 8; JMJC, beta barrel, Fe(II) and 2-oxoglutarate binding, oxidor; HET: AKG BME; 1.05A {Homo sapiens} PDB: 4gjy_A* 4aap_A* 3uyj_A*
Probab=41.90 E-value=7.3 Score=32.51 Aligned_cols=21 Identities=33% Similarity=0.558 Sum_probs=18.3
Q ss_pred CCCCCCeeEEEeeccCCCCccchhhhhcc
Q 018722 299 DLHPGDHIEIQWRRNKEFPYGWWYGVVGH 327 (351)
Q Consensus 299 dLkPGDHIEIQWRrnkefPYgWWYgvVGH 327 (351)
.|+|||-+=| |-|||.-|...
T Consensus 204 ~l~pGD~Lyi--------P~gW~H~V~~l 224 (235)
T 4gjz_A 204 ILSPGEILFI--------PVKYWHYVRAL 224 (235)
T ss_dssp EECTTCEEEE--------CTTCEEEEEES
T ss_pred EECCCCEEEe--------CCCCcEEEEEC
Confidence 4999999988 99999988754
No 127
>2ysq_A RHO guanine nucleotide exchange factor 9; SH3 domain, CDC42 guanine nucleotide exchange factor (GEF) 9, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=41.86 E-value=13 Score=27.33 Aligned_cols=23 Identities=30% Similarity=0.799 Sum_probs=18.3
Q ss_pred CCCCCCeeEEEeeccCCCCccchhhhh
Q 018722 299 DLHPGDHIEIQWRRNKEFPYGWWYGVV 325 (351)
Q Consensus 299 dLkPGDHIEIQWRrnkefPYgWWYgvV 325 (351)
.|+.||.|+|-=+.+ =|||+|..
T Consensus 28 s~~~Gd~i~v~~~~~----~~Ww~g~~ 50 (81)
T 2ysq_A 28 AFKAGDVIKVLDASN----KDWWWGQI 50 (81)
T ss_dssp CCCTTCEEEEEECCS----SSEEEEEC
T ss_pred CCCCCCEEEEEEEcC----cCEEEEEE
Confidence 479999999986543 58999974
No 128
>1uff_A Intersectin 2; beta barrel, SH3 domain, endocytosis, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.34.2.1
Probab=41.62 E-value=8.6 Score=29.19 Aligned_cols=25 Identities=28% Similarity=0.583 Sum_probs=17.7
Q ss_pred CCCCCCeeEEEeeccCCCCccchhhhh
Q 018722 299 DLHPGDHIEIQWRRNKEFPYGWWYGVV 325 (351)
Q Consensus 299 dLkPGDHIEIQWRrnkefPYgWWYgvV 325 (351)
.|+.||.|+|.=+.. -.=|||+|..
T Consensus 23 sf~~Gd~i~v~~~~~--~~~gWw~g~~ 47 (93)
T 1uff_A 23 SFNSGDIIQVDEKTV--GEPGWLYGSF 47 (93)
T ss_dssp CBCTTCEEEECSSCC--CSSSEEEEEE
T ss_pred CCCCCCEEEEeEccC--CCCCEEEEEE
Confidence 479999999965421 1358999973
No 129
>1zuu_A BZZ1 protein; SH3 domain, unknown function; 0.97A {Saccharomyces cerevisiae} SCOP: b.34.2.1
Probab=41.45 E-value=13 Score=25.38 Aligned_cols=24 Identities=29% Similarity=0.440 Sum_probs=18.2
Q ss_pred CCCCCCeeEEEeeccCCCCccchhhhh
Q 018722 299 DLHPGDHIEIQWRRNKEFPYGWWYGVV 325 (351)
Q Consensus 299 dLkPGDHIEIQWRrnkefPYgWWYgvV 325 (351)
.|+.||.|+|-=+.+ -=|||+|..
T Consensus 19 s~~~Gd~i~v~~~~~---~~~W~~g~~ 42 (58)
T 1zuu_A 19 TITPGDKISLVARDT---GSGWTKINN 42 (58)
T ss_dssp CBCTTCCEEEEECCS---SSSEEEEEE
T ss_pred cCCCCCEEEEeEcCC---CCCCEEEEE
Confidence 479999999986554 148999854
No 130
>1r3h_A MHC H2-TL-T10-129; class IB MHC, gammadelta T cell ligand, immune system; 2.50A {Mus musculus} SCOP: b.1.1.2 d.19.1.1 PDB: 1c16_A 1ypz_A*
Probab=41.42 E-value=7.5 Score=34.59 Aligned_cols=23 Identities=9% Similarity=0.176 Sum_probs=16.1
Q ss_pred eeeeeeecce--eeeeecCCCceee
Q 018722 236 VGFMLSCYDA--ELSYDQSTDTFQA 258 (351)
Q Consensus 236 vGfmLSCYDA--~lsYd~~TDTF~A 258 (351)
.||.---||= -+++|.++.++.|
T Consensus 108 ~g~~~~~ydG~d~l~fd~~~~~w~a 132 (260)
T 1r3h_A 108 LWYNQLAYDSEDLPTLSENPSSCTV 132 (260)
T ss_dssp CEEEEEEESSCEECCSSCSSCCCC-
T ss_pred eeEEEEccCcccEEEEcCCCCEEEe
Confidence 4666666665 4788998888887
No 131
>1x43_A Endophilin B1, SH3 domain GRB2-like protein B1; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}
Probab=41.41 E-value=12 Score=27.46 Aligned_cols=24 Identities=17% Similarity=0.256 Sum_probs=17.4
Q ss_pred CCCCCCeeEEEeeccCCCCccchhhh
Q 018722 299 DLHPGDHIEIQWRRNKEFPYGWWYGV 324 (351)
Q Consensus 299 dLkPGDHIEIQWRrnkefPYgWWYgv 324 (351)
.|+.||.|+|-=+.. .-=|||+|-
T Consensus 35 s~~~Gd~i~v~~~~~--~~~~Ww~g~ 58 (81)
T 1x43_A 35 SLLADEVITVFSVVG--MDSDWLMGE 58 (81)
T ss_dssp CCCTTCEEEEECCTT--CCTTEEEEE
T ss_pred CCCCCCEEEEEEcCC--CCCCcEEEE
Confidence 379999999986531 124899984
No 132
>1x2p_A Protein arginine N-methyltransferase 2; SH3 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=41.38 E-value=14 Score=26.12 Aligned_cols=22 Identities=27% Similarity=0.735 Sum_probs=17.7
Q ss_pred CCCCCCeeEEEeeccCCCCccchhhh
Q 018722 299 DLHPGDHIEIQWRRNKEFPYGWWYGV 324 (351)
Q Consensus 299 dLkPGDHIEIQWRrnkefPYgWWYgv 324 (351)
.|+.||.|+|-=+.+ =|||+|-
T Consensus 25 s~~~Gd~i~v~~~~~----~~Ww~g~ 46 (68)
T 1x2p_A 25 SFLRGEKILILRQTT----ADWWWGE 46 (68)
T ss_dssp CCCTTCEEEEEECCS----SSEEEEE
T ss_pred CCCCCCEEEEEEcCC----CCEEEEE
Confidence 379999999986653 5899985
No 133
>1x6g_A Megakaryocyte-associated tyrosine-protein kinase; MATK, CTK, HYL, SH3 domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=40.72 E-value=12 Score=27.72 Aligned_cols=22 Identities=18% Similarity=0.321 Sum_probs=16.8
Q ss_pred CCCCCeeEEEeeccCCCCccchhhh
Q 018722 300 LHPGDHIEIQWRRNKEFPYGWWYGV 324 (351)
Q Consensus 300 LkPGDHIEIQWRrnkefPYgWWYgv 324 (351)
|+.||.|+|-=+.+. =|||.|.
T Consensus 36 f~~Gd~i~v~~~~~~---~~Ww~g~ 57 (81)
T 1x6g_A 36 FRKGDVVTILEACEN---KSWYRVK 57 (81)
T ss_dssp BCTTCEEEEEECCCS---SSEEEEE
T ss_pred CCCCCEEEEEeccCC---CCeEEEE
Confidence 799999999765332 3899984
No 134
>1uhf_A Intersectin 2; beta barrel, SH3 domain, riken structural genomics/proteomics initiative, RSGI, structural genomics, signaling protein; NMR {Homo sapiens} SCOP: b.34.2.1
Probab=40.67 E-value=9 Score=27.44 Aligned_cols=21 Identities=24% Similarity=0.710 Sum_probs=16.8
Q ss_pred CCCCCCeeEEEeeccCCCCccchhhh
Q 018722 299 DLHPGDHIEIQWRRNKEFPYGWWYGV 324 (351)
Q Consensus 299 dLkPGDHIEIQWRrnkefPYgWWYgv 324 (351)
.|+.||.|+|-=+ + =|||+|-
T Consensus 26 s~~~Gd~i~v~~~-~----~~Ww~g~ 46 (69)
T 1uhf_A 26 TFTEGEEILVTQK-D----GEWWTGS 46 (69)
T ss_dssp CBCTTCEEEECEE-E----TTEEEEC
T ss_pred CCCCCCEEEEEEe-C----CCEEEEE
Confidence 4799999999754 3 5899985
No 135
>4dpz_X HRAS-like suppressor 2; alpha/beta fold, enzyme phospholipid acyltransferase, hydrol transferase; 1.25A {Homo sapiens} PDB: 4fa0_A 2kyt_A
Probab=40.51 E-value=12 Score=31.77 Aligned_cols=13 Identities=38% Similarity=0.355 Sum_probs=11.6
Q ss_pred cCCCCCCCeeEEE
Q 018722 297 LNDLHPGDHIEIQ 309 (351)
Q Consensus 297 l~dLkPGDHIEIQ 309 (351)
-.+|+|||+|+++
T Consensus 5 ~~~~~pGDlv~~~ 17 (137)
T 4dpz_X 5 RPRPRLGDLIEIS 17 (137)
T ss_dssp CCCCCTTCEEEEE
T ss_pred cccCCCCCEEEEe
Confidence 4689999999997
No 136
>2djq_A SH3 domain containing ring finger 2; MUS musculus 0 DAY neonate head cDNA, riken FULL-length enriched library, clone:4831401O22, structural genomics; NMR {Mus musculus}
Probab=40.07 E-value=15 Score=25.99 Aligned_cols=22 Identities=23% Similarity=0.558 Sum_probs=16.9
Q ss_pred CCCCCCeeEEEeeccCCCCccchhhh
Q 018722 299 DLHPGDHIEIQWRRNKEFPYGWWYGV 324 (351)
Q Consensus 299 dLkPGDHIEIQWRrnkefPYgWWYgv 324 (351)
.|+.||.|+|-=+.+ =|||+|-
T Consensus 25 s~~~Gd~i~v~~~~~----~~Ww~g~ 46 (68)
T 2djq_A 25 KFNKGDVILLRRQLD----ENWYQGE 46 (68)
T ss_dssp CCCTTCEEEEEECCC----SSEEEEE
T ss_pred cCCCCCEEEEEEecC----CCEEEEE
Confidence 479999999964432 5899986
No 137
>2kbt_A Chimera of proto-oncogene VAV, linker, immunoglobulin G-binding protein G; sortase, protein ligation, intein, inset, solubility enhancement; NMR {Mus musculus}
Probab=40.03 E-value=14 Score=30.73 Aligned_cols=24 Identities=38% Similarity=0.792 Sum_probs=18.1
Q ss_pred CCCCCCeeEEEeeccCCCCccchhhhh
Q 018722 299 DLHPGDHIEIQWRRNKEFPYGWWYGVV 325 (351)
Q Consensus 299 dLkPGDHIEIQWRrnkefPYgWWYgvV 325 (351)
.|+.||.|+|-=+. -.=|||+|..
T Consensus 23 sf~~Gd~i~Vl~~~---~~~gWw~g~~ 46 (142)
T 2kbt_A 23 SLKEGDIIKILNKK---GQQGWWRGEI 46 (142)
T ss_dssp CCCTTCEEEEEECC---CSSSEEEEEE
T ss_pred CCCCCCEEEEEEec---CCCCeEEEEE
Confidence 48999999997442 2348999974
No 138
>3i5r_A Phosphatidylinositol 3-kinase regulatory subunit alpha; SH3 domain, peptide complex, alternative splicing, disease mutation, HOST-virus interaction, phosphoprotein, polymorphism; 1.70A {Homo sapiens} SCOP: b.34.2.1 PDB: 3i5s_A 1pht_A 1pnj_A 2pni_A 1pks_A 1pkt_A
Probab=39.85 E-value=6.2 Score=29.21 Aligned_cols=26 Identities=35% Similarity=0.652 Sum_probs=17.4
Q ss_pred CCCCCCeeEEEeec--------c-CCCCc--cchhhh
Q 018722 299 DLHPGDHIEIQWRR--------N-KEFPY--GWWYGV 324 (351)
Q Consensus 299 dLkPGDHIEIQWRr--------n-kefPY--gWWYgv 324 (351)
.|++||.|+|-=+. . ...+- |||+|.
T Consensus 23 s~~~Gd~I~V~~~~~~~~~~~~~~e~~~~~~gW~~g~ 59 (83)
T 3i5r_A 23 DLHLGDILTVNKGSLVALGFSDGQEARPEEIGWLNGY 59 (83)
T ss_dssp CBCTTCEEEEEHHHHHHHTCTTTGGGCHHHHCEEEEE
T ss_pred ccCCCCEEEEeeccccccccccccccCCCCCccEEEE
Confidence 47999999997431 0 12234 899994
No 139
>3a98_A DOCK2, dedicator of cytokinesis protein 2; protein-protein complex, DOCK2, ELMO1, SH3 domain, PH domain bundle, proline-rich sequence, cytoskeleton; 2.10A {Homo sapiens}
Probab=39.80 E-value=12 Score=32.20 Aligned_cols=22 Identities=32% Similarity=0.610 Sum_probs=17.4
Q ss_pred CCCCCCeeEEEeeccCCCCccchhhhh
Q 018722 299 DLHPGDHIEIQWRRNKEFPYGWWYGVV 325 (351)
Q Consensus 299 dLkPGDHIEIQWRrnkefPYgWWYgvV 325 (351)
.|+.||.|+|-=+.+ |||+|-.
T Consensus 35 s~~~Gd~i~v~~~~~-----~W~~g~~ 56 (184)
T 3a98_A 35 SLQIGDVVRIQETCG-----DWYRGYL 56 (184)
T ss_dssp CBCTTCEEEEEEEET-----TEEEEEE
T ss_pred CcCCCCEEEEEecCC-----CEEEEEE
Confidence 379999999975532 7999975
No 140
>4esr_A Jouberin; AHI-1, AHI1, AHI-1 SH3 domain, SH3 domain, dynamin-2, protei binding, chronic myeloid leukemia; 1.53A {Homo sapiens}
Probab=39.69 E-value=14 Score=26.02 Aligned_cols=23 Identities=39% Similarity=1.072 Sum_probs=17.8
Q ss_pred CCCCCCeeEEEeeccCCCCccchhhhh
Q 018722 299 DLHPGDHIEIQWRRNKEFPYGWWYGVV 325 (351)
Q Consensus 299 dLkPGDHIEIQWRrnkefPYgWWYgvV 325 (351)
.++.||.|+|-=+.+ =|||+|-.
T Consensus 24 s~~~Gd~i~v~~~~~----~~Ww~g~~ 46 (69)
T 4esr_A 24 TIHRGDIIRVFFKDN----EDWWYGSI 46 (69)
T ss_dssp CBCTTCEEEEEEECS----SSEEEEEE
T ss_pred CCCCCCEEEEEEecC----CCeEEEEe
Confidence 579999999985543 37999954
No 141
>2kxc_A Brain-specific angiogenesis inhibitor 1-associate 2-like protein 1; IRTKS-SH3, espfu, complex structure, protein binding; NMR {Homo sapiens}
Probab=39.58 E-value=13 Score=26.14 Aligned_cols=24 Identities=33% Similarity=0.558 Sum_probs=17.8
Q ss_pred CCCCCCeeEEEeeccCCCCccchhhhh
Q 018722 299 DLHPGDHIEIQWRRNKEFPYGWWYGVV 325 (351)
Q Consensus 299 dLkPGDHIEIQWRrnkefPYgWWYgvV 325 (351)
.|+.||.|+|-=+ +-.=|||+|..
T Consensus 25 s~~~Gd~i~v~~~---~~~~~Ww~g~~ 48 (67)
T 2kxc_A 25 SFAQGDVITLLIP---EEKDGWLYGEH 48 (67)
T ss_dssp CBCTTCEEEESSS---SCBTTEEEEEE
T ss_pred cCCCCCEEEEeEC---CCCCCcEEEEE
Confidence 4799999999643 23458999864
No 142
>2nwm_A Vinexin; cell adhesion; NMR {Homo sapiens}
Probab=39.23 E-value=14 Score=26.50 Aligned_cols=22 Identities=27% Similarity=0.459 Sum_probs=17.0
Q ss_pred CCCCCCeeEEEeeccCCCCccchhhh
Q 018722 299 DLHPGDHIEIQWRRNKEFPYGWWYGV 324 (351)
Q Consensus 299 dLkPGDHIEIQWRrnkefPYgWWYgv 324 (351)
.|+.||.|+|-=+.+ =|||+|-
T Consensus 19 s~~~Gd~i~v~~~~~----~~Ww~g~ 40 (65)
T 2nwm_A 19 TLQKGDIVYIHKEVD----KNWLEGE 40 (65)
T ss_dssp CBCTTCEEEEEECCT----TTCEEEE
T ss_pred CCcCCCEEEEEEecC----CCEEEEE
Confidence 479999999964432 5899986
No 143
>2egc_A SH3 and PX domain-containing protein 2A; SH3 domain, KIAA0418 protein, SH3MD1, SH3 multiple domains 1, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=39.07 E-value=11 Score=27.46 Aligned_cols=22 Identities=36% Similarity=0.956 Sum_probs=17.8
Q ss_pred CCCCCeeEEEeeccCCCCccchhhhh
Q 018722 300 LHPGDHIEIQWRRNKEFPYGWWYGVV 325 (351)
Q Consensus 300 LkPGDHIEIQWRrnkefPYgWWYgvV 325 (351)
|+.||.|+|-=+. .=|||+|..
T Consensus 28 ~~~Gd~i~vl~~~----~~gWw~g~~ 49 (75)
T 2egc_A 28 FQEGVSMEVLERN----PNGWWYCQI 49 (75)
T ss_dssp BCTTCEEEECEEC----TTSEEEEEE
T ss_pred CCCCCEEEEEEcC----CCCeEEEEe
Confidence 7999999998554 458999965
No 144
>1awj_A ITK; transferase, regulatory intramolecular complex, kinase; NMR {Mus musculus} SCOP: b.34.2.1 PDB: 2rn8_A 2rna_A 2k79_A 2k7a_A
Probab=38.94 E-value=6 Score=28.89 Aligned_cols=22 Identities=14% Similarity=0.223 Sum_probs=16.8
Q ss_pred CCCCCeeEEEeeccCCCCccchhhhh
Q 018722 300 LHPGDHIEIQWRRNKEFPYGWWYGVV 325 (351)
Q Consensus 300 LkPGDHIEIQWRrnkefPYgWWYgvV 325 (351)
|+.||.|+|-=+.+ =|||+|..
T Consensus 39 ~~~Gd~i~v~~~~~----~~Ww~~~~ 60 (77)
T 1awj_A 39 LRCDEEYYLLDSSE----IHWWRVQD 60 (77)
T ss_dssp BCSSSCCSCCCTTS----SSBCCCCC
T ss_pred CCCCCEEEEEEecC----CCCEEEEE
Confidence 69999999974432 38999963
No 145
>1uhc_A KIAA1010 protein; beta barrel, SH3, human cDNA, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: b.34.2.1
Probab=38.65 E-value=16 Score=26.64 Aligned_cols=26 Identities=12% Similarity=0.316 Sum_probs=19.3
Q ss_pred CCCCCCeeEEEeeccCCCCccchhhh
Q 018722 299 DLHPGDHIEIQWRRNKEFPYGWWYGV 324 (351)
Q Consensus 299 dLkPGDHIEIQWRrnkefPYgWWYgv 324 (351)
.|+.||.|+|-=+.+.+--=|||+|-
T Consensus 31 s~~~Gd~i~vl~~~~~~~~~~Ww~g~ 56 (79)
T 1uhc_A 31 SVSANQKLKILEFKDVTGNTEWWLAE 56 (79)
T ss_dssp CBCTTCEEEEEESCCTTSCTTEEEEE
T ss_pred CCCCCCEEEEEECCCCCCCCCeEEEE
Confidence 37999999998765433335899984
No 146
>1spk_A RSGI RUH-010, riken cDNA 1300006M19; structural genomics, SH3 domain, five-stranded barrel, mouse cDNA; NMR {Mus musculus} SCOP: b.34.2.1
Probab=38.64 E-value=14 Score=26.40 Aligned_cols=24 Identities=29% Similarity=0.541 Sum_probs=17.8
Q ss_pred CCCCCCeeEEEeeccCCCCccchhhhh
Q 018722 299 DLHPGDHIEIQWRRNKEFPYGWWYGVV 325 (351)
Q Consensus 299 dLkPGDHIEIQWRrnkefPYgWWYgvV 325 (351)
.|+.||.|+|-=+ +-.=|||+|..
T Consensus 26 s~~~Gd~i~v~~~---~~~~gWw~g~~ 49 (72)
T 1spk_A 26 SFAQGDVLTLLIP---EEKDGWLYGEH 49 (72)
T ss_dssp CBCTTCEEEECCS---SCBTTEEEEEE
T ss_pred cCCCCCEEEEeEc---cCCCCcEEEEE
Confidence 4799999999643 23458999964
No 147
>1tuc_A Alpha-spectrin; capping protein, calcium-binding, duplication, repeat, SH3 domain, cytoskeleton; 2.02A {Gallus gallus} SCOP: b.34.2.1
Probab=38.61 E-value=14 Score=25.97 Aligned_cols=22 Identities=23% Similarity=0.527 Sum_probs=17.6
Q ss_pred CCCCCCeeEEEeeccCCCCccchhhh
Q 018722 299 DLHPGDHIEIQWRRNKEFPYGWWYGV 324 (351)
Q Consensus 299 dLkPGDHIEIQWRrnkefPYgWWYgv 324 (351)
.++.||.|+|-=+.+ =|||.|-
T Consensus 7 s~~~Gd~i~v~~~~~----~~Ww~g~ 28 (63)
T 1tuc_A 7 TMKKGDILTLLNSTN----KDWWKVE 28 (63)
T ss_dssp CBCTTCEEEEEECCS----SSEEEEE
T ss_pred CCCCCCEEEEEEecC----CCEEEEE
Confidence 479999999987664 4799984
No 148
>2dnu_A RUH-061, SH3 multiple domains 1; RSGI, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=38.24 E-value=11 Score=26.75 Aligned_cols=24 Identities=25% Similarity=0.552 Sum_probs=18.1
Q ss_pred CCCCCCeeEEEeeccCCCCccchhhhhc
Q 018722 299 DLHPGDHIEIQWRRNKEFPYGWWYGVVG 326 (351)
Q Consensus 299 dLkPGDHIEIQWRrnkefPYgWWYgvVG 326 (351)
.|+.||.|+|-=+.+ =|||+|...
T Consensus 26 s~~~Gd~i~v~~~~~----~~Ww~g~~~ 49 (71)
T 2dnu_A 26 GFEKGVTVEVIRKNL----EGWWYIRYL 49 (71)
T ss_dssp CBCTTCEEEECCCCS----SSEEEEEET
T ss_pred cCCCCCEEEEeECCC----CCeEEEEEC
Confidence 479999999974433 489998654
No 149
>2enm_A Sorting nexin-9; SH3-like barrel, protein transport, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}
Probab=38.09 E-value=17 Score=26.29 Aligned_cols=23 Identities=22% Similarity=0.370 Sum_probs=17.8
Q ss_pred CCCCCCeeEEEeeccCCCCccchhhh
Q 018722 299 DLHPGDHIEIQWRRNKEFPYGWWYGV 324 (351)
Q Consensus 299 dLkPGDHIEIQWRrnkefPYgWWYgv 324 (351)
.|+.||.|+|-=+.. .=|||+|.
T Consensus 28 s~~~Gd~i~v~~~~~---~~gW~~g~ 50 (77)
T 2enm_A 28 TVTEGEIITVTNPNV---GGGWLEGK 50 (77)
T ss_dssp CCCTTCEEEEEESCC---SSSEEEEE
T ss_pred cCCCCCEEEEeEccC---CCCeEEEE
Confidence 479999999986531 34899996
No 150
>1zlm_A Osteoclast stimulating factor 1; beta barrel, signaling protein; 1.07A {Homo sapiens}
Probab=37.77 E-value=16 Score=24.94 Aligned_cols=23 Identities=30% Similarity=0.524 Sum_probs=17.8
Q ss_pred CCCCCCeeEEEeeccCCCCccchhhhh
Q 018722 299 DLHPGDHIEIQWRRNKEFPYGWWYGVV 325 (351)
Q Consensus 299 dLkPGDHIEIQWRrnkefPYgWWYgvV 325 (351)
.++.||.|+|-=+. .=|||+|..
T Consensus 21 s~~~Gd~i~v~~~~----~~~Ww~g~~ 43 (58)
T 1zlm_A 21 YFEEGDIIYITDMS----DTNWWKGTS 43 (58)
T ss_dssp CBCTTCEEEEEECC----SSSEEEEEE
T ss_pred cCCCCCEEEEEEeC----CCCEEEEEE
Confidence 37999999997663 248999863
No 151
>2yup_A Vinexin; sorbin and SH3 domain-containing protein 3, SH3-containing adapter molecule 1, SCAM-1, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=37.71 E-value=11 Score=28.25 Aligned_cols=23 Identities=26% Similarity=0.632 Sum_probs=18.0
Q ss_pred CCCCCCeeEEEeeccCCCCccchhhhh
Q 018722 299 DLHPGDHIEIQWRRNKEFPYGWWYGVV 325 (351)
Q Consensus 299 dLkPGDHIEIQWRrnkefPYgWWYgvV 325 (351)
.|+.||.|+|-=+.+ =|||+|..
T Consensus 35 sf~~Gd~i~v~~~~~----~~Ww~g~~ 57 (90)
T 2yup_A 35 SFRKGEHICLIRKVN----ENWYEGRI 57 (90)
T ss_dssp CCCTTCEEEESSCCC----SSEEEEEC
T ss_pred CCCCCCEEEEEEEcC----CCeEEEEE
Confidence 479999999975433 58999976
No 152
>2d8j_A FYN-related kinase; SH3 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}
Probab=36.72 E-value=15 Score=26.38 Aligned_cols=24 Identities=21% Similarity=0.574 Sum_probs=18.9
Q ss_pred CCCCCCeeEEEeeccCCCCccchhhhhc
Q 018722 299 DLHPGDHIEIQWRRNKEFPYGWWYGVVG 326 (351)
Q Consensus 299 dLkPGDHIEIQWRrnkefPYgWWYgvVG 326 (351)
.|+.||.|+|-=+.+ =|||+|...
T Consensus 25 s~~~Gd~i~v~~~~~----~~Ww~g~~~ 48 (77)
T 2d8j_A 25 SFRAGDKLQVLDTSH----EGWWLARHL 48 (77)
T ss_dssp CBCTTCCEEEEECCS----SSEEEEEEC
T ss_pred CCCCCCEEEEEECCC----CCeEEEEEC
Confidence 479999999976643 589999764
No 153
>2kxd_A 11-MER peptide, SH3 domain of spectrin alpha CHAI; alpha spectrin SH3 domain, SPC-S19P20S circular permutant, S protein; NMR {Synthetic}
Probab=36.46 E-value=16 Score=26.30 Aligned_cols=22 Identities=23% Similarity=0.527 Sum_probs=17.7
Q ss_pred CCCCCCeeEEEeeccCCCCccchhhh
Q 018722 299 DLHPGDHIEIQWRRNKEFPYGWWYGV 324 (351)
Q Consensus 299 dLkPGDHIEIQWRrnkefPYgWWYgv 324 (351)
.++.||.|+|-=+.+ =|||.|-
T Consensus 17 s~~~Gd~i~v~~~~~----~~Ww~g~ 38 (73)
T 2kxd_A 17 TMKKGDILTLLNSTN----KDWWKVE 38 (73)
T ss_dssp CBCTTCEEEEEECCS----SSEEEEE
T ss_pred eEcCCCEEEEEEecC----CCEEEEE
Confidence 479999999987654 5899984
No 154
>3thk_A Spectrin alpha chain, brain; SH3 domain, chimera, structural protein; 1.70A {Rattus norvegicus} SCOP: b.34.2.1
Probab=36.26 E-value=17 Score=25.87 Aligned_cols=22 Identities=23% Similarity=0.527 Sum_probs=17.6
Q ss_pred CCCCCCeeEEEeeccCCCCccchhhh
Q 018722 299 DLHPGDHIEIQWRRNKEFPYGWWYGV 324 (351)
Q Consensus 299 dLkPGDHIEIQWRrnkefPYgWWYgv 324 (351)
.++.||.|+|-=+.+ =|||+|-
T Consensus 23 s~~~Gd~i~v~~~~~----~~Ww~g~ 44 (73)
T 3thk_A 23 TMKKGDILTLLNSTN----KDWWKVE 44 (73)
T ss_dssp CBCTTCEEEEEECCS----SSEEEEE
T ss_pred CCCCCCEEEEEECCC----CCeEEEE
Confidence 589999999976654 4799985
No 155
>2gfu_A DNA mismatch repair protein MSH6; PWWP domain, tudor domain, DNA binding, DNA binding protein; HET: DNA; NMR {Homo sapiens}
Probab=36.22 E-value=14 Score=30.39 Aligned_cols=26 Identities=35% Similarity=1.036 Sum_probs=21.5
Q ss_pred CCCCCCCeeEEEeeccCCCCccchhhhhccc
Q 018722 298 NDLHPGDHIEIQWRRNKEFPYGWWYGVVGHL 328 (351)
Q Consensus 298 ~dLkPGDHIEIQWRrnkefPYgWWYgvVGHl 328 (351)
.+++|||.| |=+-+.|| ||=|+|-..
T Consensus 21 ~~~~~GdlV---waK~~g~P--~WPa~V~~~ 46 (134)
T 2gfu_A 21 SDFSPGDLV---WAKMEGYP--WWPSLVYNH 46 (134)
T ss_dssp CCCCTTSEE---EECCTTSC--CEEEECCCC
T ss_pred CCCCCCCEE---EEeecCCC--CCCeeecch
Confidence 478999987 88888776 999999664
No 156
>2l89_A PWWP domain-containing protein 1; histone binding, protein binding; NMR {Schizosaccharomyces pombe}
Probab=36.06 E-value=12 Score=30.03 Aligned_cols=25 Identities=28% Similarity=0.744 Sum_probs=19.9
Q ss_pred CCCCCCCeeEEEeeccCCCCccchhhhhcc
Q 018722 298 NDLHPGDHIEIQWRRNKEFPYGWWYGVVGH 327 (351)
Q Consensus 298 ~dLkPGDHIEIQWRrnkefPYgWWYgvVGH 327 (351)
.+++|||.| |-+-+.|| ||=|+|-.
T Consensus 4 ~~~~~GdlV---waK~~gyP--~WPa~V~~ 28 (108)
T 2l89_A 4 DRLNFGDRI---LVKAPGYP--WWPALLLR 28 (108)
T ss_dssp CCCCTTEEE---EEECSSSC--EEEEEEEE
T ss_pred CcccCCCEE---EEEeCCcC--CCceEecC
Confidence 378999987 88888655 99999954
No 157
>2epd_A RHO GTPase-activating protein 4; SH3 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=35.85 E-value=13 Score=27.10 Aligned_cols=23 Identities=26% Similarity=0.680 Sum_probs=18.5
Q ss_pred CCCCCCeeEEEeeccCCCCccchhhhh
Q 018722 299 DLHPGDHIEIQWRRNKEFPYGWWYGVV 325 (351)
Q Consensus 299 dLkPGDHIEIQWRrnkefPYgWWYgvV 325 (351)
.|+.||.|+|-=+.+ =|||+|..
T Consensus 28 s~~~Gd~i~v~~~~~----~~Ww~g~~ 50 (76)
T 2epd_A 28 SFRRGDVLRLHERAS----SDWWRGEH 50 (76)
T ss_dssp EECTTCEEEEEEEEE----TTEEEEEE
T ss_pred CCCCCCEEEEEEeCC----CCEEEEEE
Confidence 369999999987754 48999874
No 158
>3o5z_A Phosphatidylinositol 3-kinase regulatory subunit; SRC homology 3 domain, protein binding; 2.01A {Homo sapiens} SCOP: b.34.2.0 PDB: 2kt1_A
Probab=35.33 E-value=6.7 Score=29.87 Aligned_cols=27 Identities=30% Similarity=0.614 Sum_probs=17.8
Q ss_pred CCCCCCeeEEEeecc---------CCCCc--cchhhhh
Q 018722 299 DLHPGDHIEIQWRRN---------KEFPY--GWWYGVV 325 (351)
Q Consensus 299 dLkPGDHIEIQWRrn---------kefPY--gWWYgvV 325 (351)
.|+.||.|+|-=+.. ...+= |||+|..
T Consensus 29 sf~~GD~I~V~~~~~~~l~~~~~~~~~~~~~gW~~G~~ 66 (90)
T 3o5z_A 29 ELLPGDVLVVSRAALQALGVAEGGERCPQSVGWMPGLN 66 (90)
T ss_dssp CBCTTCEEEEEHHHHHHTTCCTTGGGCHHHHCEEEEEE
T ss_pred CCcCCCEEEEEeccccccccccccccCCCCCCceEEEe
Confidence 479999999963210 12234 8999964
No 159
>2qcp_X Cation efflux system protein CUSF; silver-binding, copper-binding, beta barrel, OB-fold, metall metal resistance, metal-binding; 1.00A {Escherichia coli str} PDB: 1zeq_X 3e6z_X
Probab=34.32 E-value=22 Score=27.34 Aligned_cols=53 Identities=15% Similarity=0.351 Sum_probs=31.9
Q ss_pred eeecCCCceeecCCCCCCCceeeecCCCccccccCCCCCCCcccccccccCCCCCCCeeEEEeeccC
Q 018722 248 SYDQSTDTFQARYPPHGRRPIAIECGVPWERLRAAPVDTSPHDLHISDCLNDLHPGDHIEIQWRRNK 314 (351)
Q Consensus 248 sYd~~TDTF~ARYpphGrr~~~ie~~i~WdRlRapPvdT~~hdlh~Sdcl~dLkPGDHIEIQWRrnk 314 (351)
+-|....+...+ ||+-. ++.| |.-|-...+--..-|++|||||.|+++-++..
T Consensus 16 ~id~~~~~iTi~---H~pI~-----~l~w------paMTM~F~v~~~~~l~~lk~Gd~V~F~~~~~~ 68 (80)
T 2qcp_X 16 GIDLESKKITIH---HDPIA-----AVNW------PEMTMRFTITPQTKMSEIKTGDKVAFNFVQQG 68 (80)
T ss_dssp EEETTTTEEEEE---ECCBG-----GGTB------CSEEEEEECCTTCEECCCCTTCEEEEEEEEET
T ss_pred EEcCCCCEEEEE---cCCcc-----cCCC------CceEEEEEccChhhhhcCCCCCEEEEEEEEeC
Confidence 556777677776 66543 2334 22332222222234899999999999987654
No 160
>2o2o_A SH3-domain kinase-binding protein 1; CIN85, protein binding; NMR {Homo sapiens}
Probab=34.30 E-value=12 Score=29.00 Aligned_cols=23 Identities=43% Similarity=0.856 Sum_probs=17.7
Q ss_pred CCCCCCeeEEEeeccCCCCccchhhhh
Q 018722 299 DLHPGDHIEIQWRRNKEFPYGWWYGVV 325 (351)
Q Consensus 299 dLkPGDHIEIQWRrnkefPYgWWYgvV 325 (351)
.|+.||.|+|-=+. .=|||+|..
T Consensus 36 sf~~Gd~i~V~~~~----~~gWw~g~~ 58 (92)
T 2o2o_A 36 ELKVGDIIEVVGEV----EEGWWEGVL 58 (92)
T ss_dssp CBCSSCEEECCCGG----GSSCBCCEE
T ss_pred cccCCCEEEEeEec----CCCEEEEEE
Confidence 47999999997443 358999974
No 161
>4fu6_A PC4 and SFRS1-interacting protein; structural genomics consortium, SGC, transcription; 2.10A {Homo sapiens} PDB: 2b8a_A 2nlu_A
Probab=34.07 E-value=16 Score=30.78 Aligned_cols=33 Identities=27% Similarity=0.587 Sum_probs=25.9
Q ss_pred ccccccCCCCCCCeeEEEeeccCCCCccchhhhhcccc
Q 018722 292 HISDCLNDLHPGDHIEIQWRRNKEFPYGWWYGVVGHLE 329 (351)
Q Consensus 292 h~Sdcl~dLkPGDHIEIQWRrnkefPYgWWYgvVGHle 329 (351)
+.-..-.+.+|||.| |=+-+.|| ||=|.|-+-.
T Consensus 15 ~~~~~~~~f~~GdlV---waK~~g~p--~WPa~V~~~~ 47 (153)
T 4fu6_A 15 YFQGMTRDFKPGDLI---FAKMKGYP--HWPARVDEVP 47 (153)
T ss_dssp TTTCSGGGCCTTCEE---EECCTTSC--CEEEEECCCC
T ss_pred HHhhcccCCCCCCEE---EEeCCCCC--CCCEEEeEch
Confidence 444556789999987 88889988 8999996544
No 162
>2k9g_A SH3 domain-containing kinase-binding protein 1; CIN85, adaptor protein, downregulation, CBL, apoptosis, junction, cytoplasmic vesicle, cytoskeleton; NMR {Homo sapiens}
Probab=33.81 E-value=21 Score=25.56 Aligned_cols=25 Identities=24% Similarity=0.663 Sum_probs=18.2
Q ss_pred CCCCCCeeEEEeeccCCCCccchhhhh
Q 018722 299 DLHPGDHIEIQWRRNKEFPYGWWYGVV 325 (351)
Q Consensus 299 dLkPGDHIEIQWRrnkefPYgWWYgvV 325 (351)
.|+.||.|+|-=+. ...=|||+|..
T Consensus 27 s~~~Gd~i~v~~~~--~~~~~W~~g~~ 51 (73)
T 2k9g_A 27 TIKEGDIVTLINKD--CIDVGWWEGEL 51 (73)
T ss_dssp CBCTTCEEEEEECC--SSSTTEEEEEE
T ss_pred eECCCCEEEEEECC--CCCCCEEEEEE
Confidence 47999999998543 12358999963
No 163
>3qby_A Hepatoma-derived growth factor-related protein 2; HDGF2, structural genomics consortium, SGC, protein binding; HET: M3L; 1.95A {Homo sapiens} SCOP: b.34.9.2 PDB: 3qj6_A* 3eae_A 1n27_A
Probab=33.22 E-value=18 Score=28.34 Aligned_cols=29 Identities=21% Similarity=0.623 Sum_probs=23.1
Q ss_pred ccCCCCCCCeeEEEeeccCCCCccchhhhhcccc
Q 018722 296 CLNDLHPGDHIEIQWRRNKEFPYGWWYGVVGHLE 329 (351)
Q Consensus 296 cl~dLkPGDHIEIQWRrnkefPYgWWYgvVGHle 329 (351)
|-+++++||.| |=+-|.|| ||=|.|=...
T Consensus 2 ~p~~f~~GdlV---waK~~g~p--~WPa~V~~~~ 30 (94)
T 3qby_A 2 MPHAFKPGDLV---FAKMKGYP--HWPARIDDIA 30 (94)
T ss_dssp CCCCCCTTCEE---EECCTTSC--CEEEEECCCC
T ss_pred CCCcCccCCEE---EEecCCCC--CCCEEEeecc
Confidence 44789999988 87888877 9999996543
No 164
>2dil_A Proline-serine-threonine phosphatase-interacting protein 1; SH3 domain, PEST phosphatase-interacting protein 1, CD2- binding protein 1; NMR {Homo sapiens}
Probab=33.05 E-value=21 Score=25.22 Aligned_cols=23 Identities=35% Similarity=0.679 Sum_probs=18.1
Q ss_pred CCCCCCeeEEEeeccCCCCccchhhhh
Q 018722 299 DLHPGDHIEIQWRRNKEFPYGWWYGVV 325 (351)
Q Consensus 299 dLkPGDHIEIQWRrnkefPYgWWYgvV 325 (351)
.|+.||.|+|-=+. .=|||+|..
T Consensus 26 s~~~Gd~i~v~~~~----~~~Ww~g~~ 48 (69)
T 2dil_A 26 DLSAGDILEVILEG----EDGWWTVER 48 (69)
T ss_dssp CBCTTCEEEEEECC----SSSEEEEEE
T ss_pred CCCCCCEEEEEECC----CCCEEEEEE
Confidence 47999999998763 348999864
No 165
>2cud_A SRC-like-adapter; SH3 domain, negative mitogenesis regulator, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=32.92 E-value=18 Score=26.69 Aligned_cols=21 Identities=19% Similarity=0.711 Sum_probs=16.2
Q ss_pred CCCCCeeEEEeeccCCCCccchhhhh
Q 018722 300 LHPGDHIEIQWRRNKEFPYGWWYGVV 325 (351)
Q Consensus 300 LkPGDHIEIQWRrnkefPYgWWYgvV 325 (351)
++.||.|+|-= .+ =|||+|..
T Consensus 36 ~~~Gd~i~v~~-~~----~~Ww~~~~ 56 (79)
T 2cud_A 36 FRRGEKLRVIS-DE----GGWWKAIS 56 (79)
T ss_dssp SCTTCEEEEEE-EE----TTEEEEEE
T ss_pred CCCCCEEEEEe-cC----CCeEEEEE
Confidence 79999999974 32 38999853
No 166
>1i07_A Epidermal growth factor receptor kinase substrate EPS8; hormone/growth factor; 1.80A {Mus musculus} SCOP: b.34.2.1 PDB: 1aoj_A 1i0c_A
Probab=32.62 E-value=13 Score=25.56 Aligned_cols=21 Identities=24% Similarity=0.379 Sum_probs=16.8
Q ss_pred CCCCCCeeEEEeeccCCCCccchhhh
Q 018722 299 DLHPGDHIEIQWRRNKEFPYGWWYGV 324 (351)
Q Consensus 299 dLkPGDHIEIQWRrnkefPYgWWYgv 324 (351)
.++.||.|+|-=+ .=|||+|.
T Consensus 19 s~~~Gd~i~v~~~-----~~~Ww~~~ 39 (60)
T 1i07_A 19 SVMKDDVLEILDD-----RRQWWKVR 39 (60)
T ss_dssp CBCTTCEEEECGG-----GCCEEEEE
T ss_pred cCCCCCEEEEEEc-----CCCeEEEE
Confidence 3799999999755 35899984
No 167
>2vb2_X Copper protein, cation efflux system protein CUSF; cation PI, metal-binding, metal transport, copper tolerance, transport; 1.70A {Escherichia coli} PDB: 2vb3_X
Probab=32.41 E-value=24 Score=27.61 Aligned_cols=53 Identities=15% Similarity=0.351 Sum_probs=31.7
Q ss_pred eeecCCCceeecCCCCCCCceeeecCCCccccccCCCCCCCcccccccccCCCCCCCeeEEEeeccC
Q 018722 248 SYDQSTDTFQARYPPHGRRPIAIECGVPWERLRAAPVDTSPHDLHISDCLNDLHPGDHIEIQWRRNK 314 (351)
Q Consensus 248 sYd~~TDTF~ARYpphGrr~~~ie~~i~WdRlRapPvdT~~hdlh~Sdcl~dLkPGDHIEIQWRrnk 314 (351)
+-|....+...+ ||+-. ++.| |.-|=...+=-..-|.+|||||.|+++-++..
T Consensus 24 ~id~~~~~iTi~---H~pI~-----~l~w------paMTM~F~v~~~~~l~~lk~Gd~V~F~~~~~~ 76 (88)
T 2vb2_X 24 GIDLESKKITIH---HDPIA-----AVNW------PEMTMRFTITPQTKMSEIKTGDKVAFNFVQQG 76 (88)
T ss_dssp EEETTTTEEEEE---ECCBG-----GGTB------CSEEEEEECCTTCEECCCCTTCEEEEEEEEET
T ss_pred EEcCCCCEEEEe---cCCcc-----cCCC------CceEEEEEcCChhhhhcCCCCCEEEEEEEEeC
Confidence 456666667666 66533 2344 22332222222234899999999999988754
No 168
>2e5k_A Suppressor of T-cell receptor signaling 1; SH3 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=32.21 E-value=18 Score=27.29 Aligned_cols=26 Identities=35% Similarity=0.640 Sum_probs=18.4
Q ss_pred CCCCCCeeEEEeeccCCCCccchhhh
Q 018722 299 DLHPGDHIEIQWRRNKEFPYGWWYGV 324 (351)
Q Consensus 299 dLkPGDHIEIQWRrnkefPYgWWYgv 324 (351)
.|+.||.|+|-=+...+.-=|||+|.
T Consensus 34 s~~~Gd~i~v~~~~~~~~~~gWw~g~ 59 (94)
T 2e5k_A 34 ELVPGDFIFMSPMEQTSTSEGWIYGT 59 (94)
T ss_dssp CBCTTCEEEECGGGCCSTTTTEEEEE
T ss_pred CCCCCCEEEEEECcCCCCCCCcEEEE
Confidence 37999999997653222235899997
No 169
>1wxt_A Hypothetical protein FLJ21522; SH3 domain, EPS8-related protein 3, protein-protein interaction, structural genomics; NMR {Homo sapiens}
Probab=32.19 E-value=20 Score=25.38 Aligned_cols=21 Identities=19% Similarity=0.530 Sum_probs=17.0
Q ss_pred CCCCCCeeEEEeeccCCCCccchhhh
Q 018722 299 DLHPGDHIEIQWRRNKEFPYGWWYGV 324 (351)
Q Consensus 299 dLkPGDHIEIQWRrnkefPYgWWYgv 324 (351)
.|+.||.|+|-=+ + =|||+|.
T Consensus 25 s~~~Gd~i~v~~~---~--~~Ww~~~ 45 (68)
T 1wxt_A 25 TVVQGEKLEVLDH---S--KRWWLVK 45 (68)
T ss_dssp CBCTTCEEEEEEC---S--SSEEEEE
T ss_pred CCCCCCEEEEEEc---C--CCEEEEE
Confidence 3799999999866 2 4899986
No 170
>2da9_A SH3-domain kinase binding protein 1; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}
Probab=31.74 E-value=22 Score=25.16 Aligned_cols=24 Identities=25% Similarity=0.682 Sum_probs=17.8
Q ss_pred CCCCCCeeEEEeeccCCCCccchhhh
Q 018722 299 DLHPGDHIEIQWRRNKEFPYGWWYGV 324 (351)
Q Consensus 299 dLkPGDHIEIQWRrnkefPYgWWYgv 324 (351)
.|+.||.|+|-=+.. -.=|||+|.
T Consensus 25 s~~~Gd~i~v~~~~~--~~~~W~~g~ 48 (70)
T 2da9_A 25 TIKEGDIVTLINKDC--IDVGWWEGE 48 (70)
T ss_dssp CCCTTEEEEEEECCC--SSTTEEEEE
T ss_pred eEcCCCEEEEEECCC--CCCCeEEEE
Confidence 479999999985431 235899996
No 171
>2v1r_A Peroxisomal membrane protein PAS20; protein transport, translocation, transmembrane, peptide COM structural genomics, peroxisome; 2.1A {Saccharomyces cerevisiae} SCOP: b.34.2.1
Probab=31.64 E-value=20 Score=25.99 Aligned_cols=27 Identities=22% Similarity=0.448 Sum_probs=19.7
Q ss_pred CCCCCCeeEEEeeccC-CCCccchhhhh
Q 018722 299 DLHPGDHIEIQWRRNK-EFPYGWWYGVV 325 (351)
Q Consensus 299 dLkPGDHIEIQWRrnk-efPYgWWYgvV 325 (351)
.++.||.|+|-=+.+. +..=|||+|..
T Consensus 33 s~~~Gd~i~v~~~~~~~~~~~~Ww~g~~ 60 (80)
T 2v1r_A 33 ALKKGDLMAILSKKDPLGRDSDWWKVRT 60 (80)
T ss_dssp CBCTTCEEEEEEEECTTSCEEEEEEEEC
T ss_pred cCCCCCEEEEEECCCCCCCCCCcEEEEe
Confidence 3799999999876543 22348999965
No 172
>1u5s_A Cytoplasmic protein NCK2; protein-protein complex, beta barrel, beta sheet, zinc finger, metal binding protein; NMR {Homo sapiens} SCOP: b.34.2.1 PDB: 2fry_A
Probab=31.59 E-value=23 Score=25.09 Aligned_cols=24 Identities=21% Similarity=0.505 Sum_probs=17.7
Q ss_pred CCCCCCeeEEEeeccCCCCccchhhh
Q 018722 299 DLHPGDHIEIQWRRNKEFPYGWWYGV 324 (351)
Q Consensus 299 dLkPGDHIEIQWRrnkefPYgWWYgv 324 (351)
.|+.||.|+|-=+. +-.=|||+|.
T Consensus 24 s~~~Gd~i~v~~~~--~~~~~Ww~g~ 47 (71)
T 1u5s_A 24 NFEKGETMEVIEKP--ENDPEWWKCK 47 (71)
T ss_dssp CCCSSCCEEEEECC--CTTTCEEEEE
T ss_pred cCCCCCEEEEEECC--CCCCCCEEEE
Confidence 47999999997652 1235899995
No 173
>2l55_A SILB,silver efflux protein, MFP component of the components proton antiporter metal...; APO form, AG(I)-binding site; NMR {Cupriavidus metallidurans}
Probab=31.35 E-value=27 Score=27.05 Aligned_cols=20 Identities=20% Similarity=0.438 Sum_probs=16.9
Q ss_pred ccCCCCCCCeeEEEeeccCC
Q 018722 296 CLNDLHPGDHIEIQWRRNKE 315 (351)
Q Consensus 296 cl~dLkPGDHIEIQWRrnke 315 (351)
-|+.||+||.|+++-.+..+
T Consensus 44 ~l~~lk~Gd~V~F~~~~~~~ 63 (82)
T 2l55_A 44 LPQGLKAGDRVAFSFRLDPH 63 (82)
T ss_dssp CCSSCSTTCEEEEEEEEETT
T ss_pred HhhcCCCCCEEEEEEEECCC
Confidence 38999999999999887653
No 174
>1ugv_A KIAA0621, olygophrenin-1 like protein; beta barrel, GRAF protein, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.34.2.1
Probab=31.18 E-value=11 Score=27.26 Aligned_cols=23 Identities=17% Similarity=0.326 Sum_probs=15.9
Q ss_pred CCCCCCeeEEEeeccCCCCccchhhh
Q 018722 299 DLHPGDHIEIQWRRNKEFPYGWWYGV 324 (351)
Q Consensus 299 dLkPGDHIEIQWRrnkefPYgWWYgv 324 (351)
.|+.||.|+|-=+. -.=|||+|.
T Consensus 28 sf~~Gd~i~v~~~~---~~~~Ww~g~ 50 (72)
T 1ugv_A 28 SFTAGTVFDNVHPS---QEPGWLEGT 50 (72)
T ss_dssp CBCTTCEEBSCCBC---SSTTEEEEE
T ss_pred CCcCCCEEEEEEec---CCCCeEEEE
Confidence 37999999864232 235899984
No 175
>1x2k_A OSTF1, osteoclast stimulating factor 1; SH3 domain, human osteoclast stimulating factor 1, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=31.18 E-value=25 Score=24.83 Aligned_cols=23 Identities=30% Similarity=0.566 Sum_probs=17.8
Q ss_pred CCCCCCeeEEEeeccCCCCccchhhhh
Q 018722 299 DLHPGDHIEIQWRRNKEFPYGWWYGVV 325 (351)
Q Consensus 299 dLkPGDHIEIQWRrnkefPYgWWYgvV 325 (351)
.|+.||.|+|-=+.+ =|||+|..
T Consensus 25 s~~~Gd~i~v~~~~~----~~Ww~g~~ 47 (68)
T 1x2k_A 25 YFEEGDIIYITDMSD----TNWWKGTS 47 (68)
T ss_dssp CCCSSCEEEEEECSC----SSEEEEES
T ss_pred cCCCCCEEEEEEcCC----CCEEEEEE
Confidence 379999999976532 58999964
No 176
>2dl5_A KIAA0769 protein; SH3 domain, FCHSD2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=31.17 E-value=19 Score=26.26 Aligned_cols=24 Identities=8% Similarity=0.100 Sum_probs=18.6
Q ss_pred CCCCCCeeEEEeeccCCCCccchhhhh
Q 018722 299 DLHPGDHIEIQWRRNKEFPYGWWYGVV 325 (351)
Q Consensus 299 dLkPGDHIEIQWRrnkefPYgWWYgvV 325 (351)
.|+.||.|+|-=+.+ .=|||+|..
T Consensus 31 s~~~Gd~i~v~~~~~---~~~Ww~g~~ 54 (78)
T 2dl5_A 31 TIEEHEVLEVIEDGD---MEDWVKARN 54 (78)
T ss_dssp CBCSSEEEEEEECCS---SSSEEEEEC
T ss_pred CCCCCCEEEEEeccC---CCCcEEEEe
Confidence 379999999987654 248999865
No 177
>1wxb_A Epidermal growth factor receptor pathway substrate 8-like protein; SH3, EPS8, EPS8L2, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=30.51 E-value=21 Score=25.35 Aligned_cols=21 Identities=14% Similarity=0.322 Sum_probs=16.6
Q ss_pred CCCCCCeeEEEeeccCCCCccchhhh
Q 018722 299 DLHPGDHIEIQWRRNKEFPYGWWYGV 324 (351)
Q Consensus 299 dLkPGDHIEIQWRrnkefPYgWWYgv 324 (351)
.|+.||.|+|-=+ + =|||+|.
T Consensus 25 s~~~Gd~i~v~~~---~--~~Ww~~~ 45 (68)
T 1wxb_A 25 SVLKDEVLEVLED---G--RQWWKLR 45 (68)
T ss_dssp CBCTTCEEEEEEC---S--SSEEEEE
T ss_pred CCCCCCEEEEEEc---C--CCEEEEE
Confidence 3799999999843 2 5899985
No 178
>1bb9_A Amphiphysin 2; transferase, SH3 domain; 2.20A {Rattus norvegicus} SCOP: b.34.2.1 PDB: 1muz_A 1mv0_B
Probab=30.37 E-value=20 Score=28.80 Aligned_cols=27 Identities=33% Similarity=0.481 Sum_probs=19.3
Q ss_pred CCCCCCeeEEEeeccC-CCCccchhhhh
Q 018722 299 DLHPGDHIEIQWRRNK-EFPYGWWYGVV 325 (351)
Q Consensus 299 dLkPGDHIEIQWRrnk-efPYgWWYgvV 325 (351)
.|+.||.|+|-=|..+ +-.=|||+|..
T Consensus 62 sf~~GDiI~Vl~~~~~~~~~~gWw~G~~ 89 (115)
T 1bb9_A 62 QLKAGDVVLVIPFQNPEEQDEGWLMGVK 89 (115)
T ss_dssp CBCTTCEEEEECCSCGGGCCTTEEEEEE
T ss_pred CcCCCCEEEEeeccCCcccCCCeEEEEe
Confidence 4799999999874221 23459999965
No 179
>1wx6_A Cytoplasmic protein NCK2; SH3 domain, structural genomics, signal transduction, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens}
Probab=30.28 E-value=26 Score=26.16 Aligned_cols=24 Identities=17% Similarity=0.468 Sum_probs=17.6
Q ss_pred CCCCCCeeEEEeeccCCCCccchhhh
Q 018722 299 DLHPGDHIEIQWRRNKEFPYGWWYGV 324 (351)
Q Consensus 299 dLkPGDHIEIQWRrnkefPYgWWYgv 324 (351)
.|+.||.|+|-=+.. --=|||+|.
T Consensus 35 s~~~Gd~i~v~~~~~--~~~~Ww~g~ 58 (91)
T 1wx6_A 35 NFEKGETMEVIEKPE--NDPEWWKCK 58 (91)
T ss_dssp CCCTTCEEEEEECCS--SCTTEEEEE
T ss_pred cCCCCCEEEEEECCC--CCCCcEEEE
Confidence 379999999986521 134899994
No 180
>2cre_A HEF-like protein; SH3 domain, SRC homology 3 domain, beta barrel, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=30.10 E-value=28 Score=24.54 Aligned_cols=25 Identities=24% Similarity=0.486 Sum_probs=18.1
Q ss_pred CCCCCCeeEEEeeccCCCCccchhhh
Q 018722 299 DLHPGDHIEIQWRRNKEFPYGWWYGV 324 (351)
Q Consensus 299 dLkPGDHIEIQWRrnkefPYgWWYgv 324 (351)
.|+.||.|+|-=+.. +-.=|||+|.
T Consensus 25 s~~~Gd~i~v~~~~~-~~~~~Ww~g~ 49 (71)
T 2cre_A 25 AFSRGDILTILEQHV-PESEGWWKCL 49 (71)
T ss_dssp CCCSSCCEEEEESCC-TTSTTEEEEE
T ss_pred CCCCCCEEEEeEcCC-CCCCCcEEEE
Confidence 479999999976531 1135899986
No 181
>1gri_A Growth factor bound protein 2; SH2, SH3, signal transduction adaptor; 3.10A {Homo sapiens} SCOP: b.34.2.1 b.34.2.1 d.93.1.1 PDB: 1aze_A 2a37_A 2azv_A 2a36_A 2azs_A
Probab=29.92 E-value=24 Score=29.83 Aligned_cols=23 Identities=26% Similarity=0.680 Sum_probs=18.0
Q ss_pred CCCCCCeeEEEeeccCCCCccchhhhh
Q 018722 299 DLHPGDHIEIQWRRNKEFPYGWWYGVV 325 (351)
Q Consensus 299 dLkPGDHIEIQWRrnkefPYgWWYgvV 325 (351)
.++.||.|+|-=+.+ =|||+|..
T Consensus 176 ~~~~Gd~i~v~~~~~----~~W~~g~~ 198 (217)
T 1gri_A 176 GFRRGDFIHVMDNSD----PNWWKGAC 198 (217)
T ss_dssp CCCTTCEEEEEECCS----SSEEEEEC
T ss_pred CCCCCCEEEEEEeCC----CCeEEEEE
Confidence 479999999976643 38999864
No 182
>3jv3_A Intersectin-1; SH3 domain, DH domain, guanine nucleotide exchange factor, autoinhibition, domain-swapped, cell junction, cell project endocytosis; 2.40A {Mus musculus} PDB: 3gf9_A
Probab=29.12 E-value=21 Score=31.09 Aligned_cols=23 Identities=26% Similarity=0.663 Sum_probs=18.1
Q ss_pred CCCCCCeeEEEeeccCCCCccchhhhh
Q 018722 299 DLHPGDHIEIQWRRNKEFPYGWWYGVV 325 (351)
Q Consensus 299 dLkPGDHIEIQWRrnkefPYgWWYgvV 325 (351)
.++.||.|+|-=+.+ =|||.|-.
T Consensus 20 ~~~~gd~i~v~~~~~----~~w~~~~~ 42 (283)
T 3jv3_A 20 AFSKGQIINVLNKED----PDWWKGEV 42 (283)
T ss_dssp CBCTTCEEEEEECCS----TTEEEEEE
T ss_pred CCCCCCEEEEEecCC----CCEEEEEE
Confidence 589999999976653 37999853
No 183
>2ydl_A SH3 domain-containing kinase-binding protein 1; signaling protein; 2.05A {Homo sapiens} PDB: 2k6d_A
Probab=28.94 E-value=26 Score=25.37 Aligned_cols=25 Identities=24% Similarity=0.679 Sum_probs=18.2
Q ss_pred CCCCCCeeEEEeeccCCCCccchhhhh
Q 018722 299 DLHPGDHIEIQWRRNKEFPYGWWYGVV 325 (351)
Q Consensus 299 dLkPGDHIEIQWRrnkefPYgWWYgvV 325 (351)
.|+.||.|+|-=+.. -.=|||+|..
T Consensus 20 s~~~Gd~i~vl~~~~--~~~gWw~g~~ 44 (69)
T 2ydl_A 20 TIKEGDIVTLINKDC--IDVGWWEGEL 44 (69)
T ss_dssp CBCTTCEEEEEESCC--SSTTEEEEEE
T ss_pred ccCCCCEEEEEEcCC--CCCCEEEEEE
Confidence 479999999985531 1358999863
No 184
>2d8h_A SH3YL1 protein; SH3 domain, hypothetical protein SH3YL1, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=28.64 E-value=24 Score=25.70 Aligned_cols=24 Identities=25% Similarity=0.812 Sum_probs=18.3
Q ss_pred CCCCCeeEEEeeccCCCCccchhhhh
Q 018722 300 LHPGDHIEIQWRRNKEFPYGWWYGVV 325 (351)
Q Consensus 300 LkPGDHIEIQWRrnkefPYgWWYgvV 325 (351)
|+.||.|+|-=+.+- -=|||+|..
T Consensus 36 f~~Gd~i~v~~~~~~--~~~Ww~g~~ 59 (80)
T 2d8h_A 36 FQAGDRITVISKTDS--HFDWWEGKL 59 (80)
T ss_dssp ECTTCEEEEEECCSC--SSSEEEEEE
T ss_pred EcCCCEEEEeECcCC--CCCeEEEEE
Confidence 699999999866541 248999875
No 185
>1ri0_A Hepatoma-derived growth factor; HDGF, HATH domain, PWWP domain, heparin-binding, hormone/growth factor complex; NMR {Homo sapiens} SCOP: b.34.9.2 PDB: 2b8a_A 2nlu_A
Probab=28.60 E-value=17 Score=29.39 Aligned_cols=29 Identities=21% Similarity=0.541 Sum_probs=22.2
Q ss_pred cccc--cCCCCCCCeeEEEeeccCCCCccchhhhhc
Q 018722 293 ISDC--LNDLHPGDHIEIQWRRNKEFPYGWWYGVVG 326 (351)
Q Consensus 293 ~Sdc--l~dLkPGDHIEIQWRrnkefPYgWWYgvVG 326 (351)
+++| -.+++|||.| |=+-|.|| ||=|.|=
T Consensus 11 ~~~~~~~~~~~~GdlV---waK~kGyP--~WPa~V~ 41 (110)
T 1ri0_A 11 MSRSNRQKEYKCGDLV---FAKMKGYP--HWPARID 41 (110)
T ss_dssp CCCCCCSSSCCTTCEE---EEEETTEE--EEEEEEE
T ss_pred hhcccccCCCCCCCEE---EEEeCCCC--CCCEEEe
Confidence 4444 3578999977 88888776 9999994
No 186
>2jte_A CD2-associated protein; SH3 domain, coiled coil, cytoplasm, phosphorylation, SH3-binding, signaling protein; NMR {Mus musculus} PDB: 2kro_A
Probab=28.26 E-value=29 Score=24.03 Aligned_cols=24 Identities=25% Similarity=0.618 Sum_probs=17.7
Q ss_pred CCCCCCeeEEEeeccCCCCccchhhh
Q 018722 299 DLHPGDHIEIQWRRNKEFPYGWWYGV 324 (351)
Q Consensus 299 dLkPGDHIEIQWRrnkefPYgWWYgv 324 (351)
.++.||.|+|-=+.+ -.=|||+|-
T Consensus 24 s~~~Gd~i~v~~~~~--~~~~W~~g~ 47 (64)
T 2jte_A 24 TFREGEIIHLISKET--GEAGWWKGE 47 (64)
T ss_dssp CBCTTCEEEEEESCS--SSTTEEEEE
T ss_pred CCCCCCEEEEEECCC--CCCCEEEEE
Confidence 479999999976532 124899985
No 187
>1h3z_A Hypothetical 62.8 kDa protein C215.07C; nuclear protein, PWWP, chromatin, beta-barrel; NMR {Schizosaccharomyces pombe} SCOP: b.34.9.2
Probab=28.19 E-value=15 Score=29.18 Aligned_cols=26 Identities=27% Similarity=0.684 Sum_probs=21.1
Q ss_pred CCCCCCCeeEEEeeccCCCCccchhhhhccc
Q 018722 298 NDLHPGDHIEIQWRRNKEFPYGWWYGVVGHL 328 (351)
Q Consensus 298 ~dLkPGDHIEIQWRrnkefPYgWWYgvVGHl 328 (351)
.+++|||.| |=+-+.|| ||=|.|-.-
T Consensus 5 ~~~~~GdlV---waK~~gyP--~WPa~V~~p 30 (109)
T 1h3z_A 5 VNYKPGMRV---LTKMSGFP--WWPSMVVTE 30 (109)
T ss_dssp CCCCTTCEE---EEEETTEE--EEEEEECCG
T ss_pred ccCCCCCEE---EEEeCCcC--CCCEEEccc
Confidence 478999987 87888776 999999753
No 188
>1at0_A 17-hedgehog; developmental signaling molecule, cholesterol transfer, signaling protein; 1.90A {Drosophila melanogaster} SCOP: b.86.1.1
Probab=27.61 E-value=26 Score=28.98 Aligned_cols=25 Identities=8% Similarity=0.163 Sum_probs=21.1
Q ss_pred CCCCcccccccc---------cCCCCCCCeeEEE
Q 018722 285 DTSPHDLHISDC---------LNDLHPGDHIEIQ 309 (351)
Q Consensus 285 dT~~hdlh~Sdc---------l~dLkPGDHIEIQ 309 (351)
-||.|-+.+.+| ..+|+|||.|-++
T Consensus 68 lTp~H~i~v~~~~~~~~~~v~A~~l~~GD~v~~~ 101 (145)
T 1at0_A 68 VTPAHLVSVWQPESQKLTFVFADRIEEKNQVLVR 101 (145)
T ss_dssp ECTTCEEEEEETTTTEEEEEEGGGCCTTCEEEEE
T ss_pred EeCCCEEEEecCCCCcEEEEEHHHCcCCCEEEEe
Confidence 378899998887 4699999999876
No 189
>2ln7_A LPXTG-SITE transpeptidase family protein; sortase, sortase family D, enzyme, protein binding; NMR {Bacillus anthracis}
Probab=27.57 E-value=9.6 Score=31.81 Aligned_cols=17 Identities=18% Similarity=0.319 Sum_probs=14.2
Q ss_pred ccccCCCCCCCeeEEEe
Q 018722 294 SDCLNDLHPGDHIEIQW 310 (351)
Q Consensus 294 Sdcl~dLkPGDHIEIQW 310 (351)
-.-|++|++||.|.|+-
T Consensus 70 F~~L~~l~~GD~i~v~~ 86 (147)
T 2ln7_A 70 FTDLGQLKEKDTLVLEY 86 (147)
T ss_dssp SSHHHHSSTTCEEEEEE
T ss_pred hhhhhcccCCCEEEEEE
Confidence 34578999999999984
No 190
>3k2o_A Bifunctional arginine demethylase and lysyl-hydro JMJD6; structural genomics consortium, SGC, chromatin regulator, developmental protein; 1.75A {Homo sapiens} PDB: 3ld8_A 3ldb_A*
Probab=26.54 E-value=4.8 Score=38.24 Aligned_cols=45 Identities=22% Similarity=0.401 Sum_probs=32.4
Q ss_pred cccccccCCCCCCCeeEEEeeccCCCCccchhhhhccccccCCCCCceeecCCce
Q 018722 291 LHISDCLNDLHPGDHIEIQWRRNKEFPYGWWYGVVGHLESCDGNENFCHCHNSDY 345 (351)
Q Consensus 291 lh~Sdcl~dLkPGDHIEIQWRrnkefPYgWWYgvVGHlesCdgn~~~C~Ch~sdt 345 (351)
.+...| .|+|||-+-| |-|||+.|...-+|-.=|.|.+.+.+-++
T Consensus 253 ~~~~~~--~l~pGd~l~i--------P~gw~H~v~~~~~sisv~~~f~~~~nl~~ 297 (336)
T 3k2o_A 253 FKPLEI--LQKPGETVFV--------PGGWWHVVLNLDTTIAITQNFASSTNFPV 297 (336)
T ss_dssp GCCEEE--EECTTCEEEE--------CTTCEEEEEESSCEEEEEEEECCTTTHHH
T ss_pred CceEEE--EECCCCEEEe--------CCCCcEEEecCCCeEEEEcccCCcccHHH
Confidence 344455 4899999987 99999999987766555666666655443
No 191
>1wlf_A PEX1, peroxisome biogenesis factor 1; N-terminal domain, protein transport; 2.05A {Mus musculus} SCOP: b.52.2.3 d.31.1.1
Probab=26.17 E-value=21 Score=30.95 Aligned_cols=14 Identities=21% Similarity=0.254 Sum_probs=12.4
Q ss_pred CCCCCeeEEEeecc
Q 018722 300 LHPGDHIEIQWRRN 313 (351)
Q Consensus 300 LkPGDHIEIQWRrn 313 (351)
+.+||-|||+|+++
T Consensus 39 ~~~gd~VeI~g~~~ 52 (179)
T 1wlf_A 39 LLQNQAIEVASDHQ 52 (179)
T ss_dssp CCTTCCEEEESSSC
T ss_pred CCCCcEEEEEeCCe
Confidence 68999999999875
No 192
>2k2m_A EPS8-like protein 1; alternative splicing, coiled coil, cytoplasm, SH3 domain, signaling protein; NMR {Homo sapiens} PDB: 2rol_A
Probab=26.08 E-value=29 Score=24.61 Aligned_cols=21 Identities=19% Similarity=0.400 Sum_probs=16.7
Q ss_pred CCCCCCeeEEEeeccCCCCccchhhh
Q 018722 299 DLHPGDHIEIQWRRNKEFPYGWWYGV 324 (351)
Q Consensus 299 dLkPGDHIEIQWRrnkefPYgWWYgv 324 (351)
.|+.||.|+|-=+ + =|||+|.
T Consensus 26 s~~~Gd~i~v~~~---~--~~Ww~~~ 46 (68)
T 2k2m_A 26 SVKQRDVLEVLDD---S--RKWWKVR 46 (68)
T ss_dssp CBCTTCEEEEEEC---S--SSEEEEE
T ss_pred cCCCCCEEEEEEc---C--CCeEEEE
Confidence 4799999999765 2 4899984
No 193
>1nm7_A Peroxisomal membrane protein PAS20; yeast, PEX5P, PEX14P, PEX13P, import machine, SH3 domain, protein transport; NMR {Saccharomyces cerevisiae} SCOP: b.34.2.1
Probab=26.05 E-value=31 Score=25.40 Aligned_cols=26 Identities=23% Similarity=0.450 Sum_probs=19.0
Q ss_pred CCCCCeeEEEeecc-CCCCccchhhhh
Q 018722 300 LHPGDHIEIQWRRN-KEFPYGWWYGVV 325 (351)
Q Consensus 300 LkPGDHIEIQWRrn-kefPYgWWYgvV 325 (351)
++.||.|+|-=+.+ .+-.=|||.|..
T Consensus 27 f~~Gd~i~Vl~~~~~~~~~~gWW~g~~ 53 (69)
T 1nm7_A 27 LKKGDLMAILSKKDPLGRDSDWWKVRT 53 (69)
T ss_dssp CCTTCEEEECCSSSSSCCSSSCEEEEE
T ss_pred CCCCCEEEEEecCCCCCCCCCeeEEEe
Confidence 79999999975544 133469999864
No 194
>4ag1_C Fynomer; hydrolase-de novo protein complex, inhibitor, serine proteas; 1.40A {Synthetic construct} PDB: 4afz_C 4ag2_C* 4afq_C* 4afs_C 4afu_C 1azg_B 1nyf_A 1nyg_A 1a0n_B 3ua7_A 3ua6_A 1fyn_A 1m27_C* 1shf_A 1zbj_A 1efn_A 1avz_C 1nlo_C* 1nlp_C* 1qwe_A ...
Probab=25.96 E-value=31 Score=25.79 Aligned_cols=23 Identities=22% Similarity=0.477 Sum_probs=18.4
Q ss_pred CCCCCCeeEEEeeccCCCCccchhhhh
Q 018722 299 DLHPGDHIEIQWRRNKEFPYGWWYGVV 325 (351)
Q Consensus 299 dLkPGDHIEIQWRrnkefPYgWWYgvV 325 (351)
.++.||.|+|-=+.+ =|||+|..
T Consensus 24 sf~~Gd~i~vl~~~~----~~Ww~g~~ 46 (84)
T 4ag1_C 24 SFHKGEKFQILEFGP----GDWWEARS 46 (84)
T ss_dssp CBCTTCEEEEEECCS----SSEEEEEE
T ss_pred cccCCCEEEEEEecC----CCeEEEEE
Confidence 579999999976553 37999875
No 195
>2hj1_A Hypothetical protein; structural genomics, PSI, protein structure initiative, NEW research center for structural genomics, nysgxrc; 2.10A {Haemophilus influenzae} SCOP: d.15.3.4
Probab=25.83 E-value=26 Score=28.11 Aligned_cols=9 Identities=67% Similarity=1.021 Sum_probs=8.6
Q ss_pred CCCCCeeEE
Q 018722 300 LHPGDHIEI 308 (351)
Q Consensus 300 LkPGDHIEI 308 (351)
|+.||.|||
T Consensus 74 L~dGDRVEI 82 (97)
T 2hj1_A 74 LKEGDRIEI 82 (97)
T ss_dssp CCTTCEEEE
T ss_pred CCCCCEEEE
Confidence 999999998
No 196
>2jmc_A Spectrin alpha chain, brain and P41 peptide chimera; SPC-SH3, signaling protein; NMR {Gallus gallus}
Probab=25.70 E-value=21 Score=26.06 Aligned_cols=22 Identities=23% Similarity=0.527 Sum_probs=17.4
Q ss_pred CCCCCCeeEEEeeccCCCCccchhhh
Q 018722 299 DLHPGDHIEIQWRRNKEFPYGWWYGV 324 (351)
Q Consensus 299 dLkPGDHIEIQWRrnkefPYgWWYgv 324 (351)
.++.||.|+|-=+.+ =|||+|-
T Consensus 9 s~~~Gd~i~v~~~~~----~~Ww~g~ 30 (77)
T 2jmc_A 9 TMKKGDILTLLNSTN----KDWWKVE 30 (77)
T ss_dssp CCCTTCEEECCCCCC----SSCCCEE
T ss_pred CCCCCCEEEEEEecC----CCEEEEE
Confidence 378999999986654 4799984
No 197
>3qwx_X Cell death abnormality protein 2; cell engulfment, signaling protein; 2.01A {Caenorhabditis elegans}
Probab=25.54 E-value=29 Score=28.74 Aligned_cols=23 Identities=22% Similarity=0.564 Sum_probs=17.8
Q ss_pred CCCCCCeeEEEeeccCCCCccchhhhh
Q 018722 299 DLHPGDHIEIQWRRNKEFPYGWWYGVV 325 (351)
Q Consensus 299 dLkPGDHIEIQWRrnkefPYgWWYgvV 325 (351)
.++.||.|+|-=+. .=|||.|..
T Consensus 136 sf~~Gd~i~v~~~~----~~~Ww~g~~ 158 (174)
T 3qwx_X 136 PFEQGERLEILSKT----NQDWWEARN 158 (174)
T ss_dssp CBCTTCEEEEEECC----SSSEEEEEC
T ss_pred ccccCCEEEEEEcc----CCCeEEEEE
Confidence 47999999997544 339999973
No 198
>1wxu_A Peroxisomal biogenesis factor 13; SH3 domain, PEX13, protein-protein interaction, structural genomics; NMR {Mus musculus}
Probab=25.12 E-value=25 Score=26.53 Aligned_cols=26 Identities=15% Similarity=0.469 Sum_probs=18.0
Q ss_pred CCCCCCeeEEEeeccCCCCccchhhh
Q 018722 299 DLHPGDHIEIQWRRNKEFPYGWWYGV 324 (351)
Q Consensus 299 dLkPGDHIEIQWRrnkefPYgWWYgv 324 (351)
.|+.||.|+|-=+.+...-=|||+|-
T Consensus 35 sf~~Gd~i~v~~~~~~~~~~gWw~g~ 60 (93)
T 1wxu_A 35 SFRAGDMLNLALKEQQPKVRGWLLAS 60 (93)
T ss_dssp CBCSSCBCEECCTTTSCSCSSCEEEE
T ss_pred CcCCCCEEEEEECCCCCCCCCcEEEE
Confidence 37999999997554321124899984
No 199
>1i1j_A Melanoma derived growth regulatory protein; SH3 subdomain, hormone/growth factor complex; 1.39A {Homo sapiens} SCOP: b.34.2.1 PDB: 1k0x_A 1hjd_A
Probab=25.05 E-value=27 Score=27.93 Aligned_cols=24 Identities=25% Similarity=0.519 Sum_probs=17.7
Q ss_pred CCCCCeeEEEeeccCCCCcc--chhhhhc
Q 018722 300 LHPGDHIEIQWRRNKEFPYG--WWYGVVG 326 (351)
Q Consensus 300 LkPGDHIEIQWRrnkefPYg--WWYgvVG 326 (351)
|+.||.|+|-=+-. .=| ||.|.++
T Consensus 41 f~~GDiI~Vl~k~~---~~g~dWW~G~~~ 66 (108)
T 1i1j_A 41 IHRGQVVYVFSKLK---GRGRLFWGGSVQ 66 (108)
T ss_dssp BCTTCEEEEEEEEC---GGGTTEEEEEEB
T ss_pred cCCCCEEEEEEecC---CCCCCEEEEEEC
Confidence 79999999975521 235 9999764
No 200
>3e57_A Uncharacterized protein TM1382; structural genomics, nudix hydrolase, PSI-2, protein structure initiative; 1.89A {Thermotoga maritima}
Probab=24.48 E-value=26 Score=31.22 Aligned_cols=38 Identities=26% Similarity=0.348 Sum_probs=22.7
Q ss_pred cccccCCCCCCCeeEEEeeccCC----CCccchhhhhccccccC
Q 018722 293 ISDCLNDLHPGDHIEIQWRRNKE----FPYGWWYGVVGHLESCD 332 (351)
Q Consensus 293 ~Sdcl~dLkPGDHIEIQWRrnke----fPYgWWYgvVGHlesCd 332 (351)
+.-|+-. -+|.|=++-|..+. ++-+||.|+-||.|.=.
T Consensus 70 i~~~II~--~~grvLl~~R~~~~~e~~~~g~w~~gPGGhVE~GE 111 (211)
T 3e57_A 70 IPYVVIM--DGDRVLITKRTTKQSEKRLHNLYSLGIGGHVREGD 111 (211)
T ss_dssp EEEEEEE--ETTEEEEEEC------------CBSSEECCCBGGG
T ss_pred EEEEEEE--ECCEEEEEEECCCCCcccccCCcccccceEEeCCC
Confidence 4446643 37899999886553 88999999999998643
No 201
>2zkq_q 40S ribosomal protein S11E; protein-RNA complex, 40S ribosomal subunit, ribosomal protein/RNA complex; 8.70A {Canis familiaris} PDB: 3jyv_Q* 1s1h_Q
Probab=23.61 E-value=41 Score=29.72 Aligned_cols=19 Identities=32% Similarity=0.793 Sum_probs=14.7
Q ss_pred cccccccCCCCCCCeeEEE
Q 018722 291 LHISDCLNDLHPGDHIEIQ 309 (351)
Q Consensus 291 lh~Sdcl~dLkPGDHIEIQ 309 (351)
.|-+.|.++.+.||.|+|+
T Consensus 111 AHDe~~n~~~kvGD~V~I~ 129 (158)
T 2zkq_q 111 VHLSPCFRDVQIGDIVTVG 129 (158)
T ss_dssp CBCCSSCCCC-CCCEEEEE
T ss_pred EECCcccCcCCCCCEEEEE
Confidence 3556688899999999997
No 202
>2eyz_A V-CRK sarcoma virus CT10 oncogene homolog isoform A; SH2, SH3, signaling protein; NMR {Homo sapiens} PDB: 2l3s_A 2l3p_A 2l3q_A 2ggr_A
Probab=23.45 E-value=27 Score=31.88 Aligned_cols=23 Identities=22% Similarity=0.400 Sum_probs=17.8
Q ss_pred CCCCCCeeEEEeeccCCCCccchhhhh
Q 018722 299 DLHPGDHIEIQWRRNKEFPYGWWYGVV 325 (351)
Q Consensus 299 dLkPGDHIEIQWRrnkefPYgWWYgvV 325 (351)
.|+.||.|+|--+-+ =|||+|.+
T Consensus 257 ~~~~Gd~i~v~~~~~----~gWw~g~~ 279 (304)
T 2eyz_A 257 ALEVGELVKVTKINV----SGQWEGEC 279 (304)
T ss_dssp CBCTTSCCEEEEECT----TSCEEEEE
T ss_pred cccCCCEEEEEEecC----CCeEEEEE
Confidence 478999999984433 59999865
No 203
>2kl0_A Putative thiamin biosynthesis THis; structural genomics, PSI-2, protein structure initiative, N structural genomics consortium, NESG; NMR {Rhodopseudomonas palustris} PDB: 2lek_A
Probab=22.62 E-value=33 Score=25.67 Aligned_cols=10 Identities=50% Similarity=0.813 Sum_probs=8.7
Q ss_pred CCCCCCeeEE
Q 018722 299 DLHPGDHIEI 308 (351)
Q Consensus 299 dLkPGDHIEI 308 (351)
.|+.||.|||
T Consensus 49 ~L~dGD~veI 58 (73)
T 2kl0_A 49 PVTAGDEIEI 58 (73)
T ss_dssp BCCTTCEEEE
T ss_pred cCCCCCEEEE
Confidence 4889999998
No 204
>2cu3_A Unknown function protein; thermus thermophilus HB8, structural genomics, riken structu genomics/proteomics initiative, RSGI, NPPSFA; 1.70A {Thermus thermophilus} SCOP: d.15.3.2 PDB: 2htm_E
Probab=22.31 E-value=35 Score=24.36 Aligned_cols=10 Identities=40% Similarity=0.743 Sum_probs=8.5
Q ss_pred CCCCCCeeEE
Q 018722 299 DLHPGDHIEI 308 (351)
Q Consensus 299 dLkPGDHIEI 308 (351)
-|++||.|||
T Consensus 48 ~L~dgD~v~i 57 (64)
T 2cu3_A 48 PLRDGDVVEV 57 (64)
T ss_dssp CCCTTCEEEE
T ss_pred CCCCCCEEEE
Confidence 4889999997
No 205
>1a62_A RHO; transcription termination, termination, RNA binding domain, transcription regulation, OB fold, F1-ATPase; 1.55A {Escherichia coli BL21} SCOP: a.140.3.1 b.40.4.5 PDB: 1a63_A 2a8v_A 1a8v_A
Probab=22.26 E-value=48 Score=27.61 Aligned_cols=28 Identities=36% Similarity=0.573 Sum_probs=22.3
Q ss_pred Ccccccccc-cC--CCCCCCeeEEEeeccCC
Q 018722 288 PHDLHISDC-LN--DLHPGDHIEIQWRRNKE 315 (351)
Q Consensus 288 ~hdlh~Sdc-l~--dLkPGDHIEIQWRrnke 315 (351)
+.|.++|-- +. +|+.||.|+.|=|..|+
T Consensus 76 ~~DiyVs~~~irrf~lr~GD~V~g~vr~~~~ 106 (130)
T 1a62_A 76 PDDIYVSPSQIRRFNLRTGDTISGKIRPPKE 106 (130)
T ss_dssp TTCEEECHHHHHHTTCCTTCEEEEEEECCCT
T ss_pred CCCEEECHHHHhHhCCCCCCEEEEEEeCCCC
Confidence 467777643 44 89999999999998876
No 206
>1ou8_A Stringent starvation protein B homolog; peptide-binding pocket, protein-peptide complex, homodimer, transport protein; 1.60A {Haemophilus influenzae} SCOP: b.136.1.1 PDB: 1zsz_A 1twb_A 1zsz_B
Probab=22.09 E-value=31 Score=28.91 Aligned_cols=12 Identities=58% Similarity=1.185 Sum_probs=10.9
Q ss_pred eeeccCCeeeeee
Q 018722 228 VYNRENGHVGFML 240 (351)
Q Consensus 228 VYnRenghvGfmL 240 (351)
+|.||||+ |+++
T Consensus 92 IyArEnG~-Gm~F 103 (111)
T 1ou8_A 92 IYARENGD-GVMF 103 (111)
T ss_dssp EEETTTCC-EEEC
T ss_pred eeeeccCC-cccc
Confidence 79999999 8887
No 207
>1t2w_A Sortase; transpeptidase, beta barrel, hydrolase; 1.80A {Staphylococcus aureus} SCOP: b.100.1.1 PDB: 1t2o_A 1ija_A 2kid_A* 1t2p_A
Probab=21.99 E-value=34 Score=28.12 Aligned_cols=18 Identities=11% Similarity=0.130 Sum_probs=14.6
Q ss_pred cccCCCCCCCeeEEEeec
Q 018722 295 DCLNDLHPGDHIEIQWRR 312 (351)
Q Consensus 295 dcl~dLkPGDHIEIQWRr 312 (351)
.-|++||+||.|.|+-..
T Consensus 70 ~~L~~l~~Gd~i~v~~~~ 87 (145)
T 1t2w_A 70 TNLKAAKKGSMVYFKVGN 87 (145)
T ss_dssp TTGGGCCTTCEEEEEETT
T ss_pred CChhhCCCCCEEEEEECC
Confidence 457789999999998643
No 208
>2lcj_A PAB POLC intein; hydrolase; NMR {Pyrococcus abyssi}
Probab=21.85 E-value=36 Score=28.95 Aligned_cols=24 Identities=17% Similarity=0.333 Sum_probs=20.4
Q ss_pred CCCcccccccc-------cCCCCCCCeeEEE
Q 018722 286 TSPHDLHISDC-------LNDLHPGDHIEIQ 309 (351)
Q Consensus 286 T~~hdlh~Sdc-------l~dLkPGDHIEIQ 309 (351)
|+.|-+.+.+- ..+|||||.|-+-
T Consensus 90 T~~H~~~v~~~g~~~~~~A~eLk~GD~v~v~ 120 (185)
T 2lcj_A 90 TVDHPVLVYENGRFIEKRAFEVKEGDKVLVS 120 (185)
T ss_dssp CSSSEEEEEETTEEEEEEGGGCCTTCEEEEC
T ss_pred CCCCEEEEecCCeEEEEEHHHCCCCCEEEEc
Confidence 88899887665 8999999999884
No 209
>4eqa_C PA1845 protein, putative uncharacterized protein; type VI secretion, T6S, antitoxin-toxin complex, unknown FUN; 1.60A {Pseudomonas aeruginosa} PDB: 4fgi_B
Probab=21.38 E-value=69 Score=27.46 Aligned_cols=58 Identities=29% Similarity=0.406 Sum_probs=47.4
Q ss_pred hhcCcccccceeeeccCCeeeee--eeeccee-eeeecCCCceeecCCCCCCCceeeecCC
Q 018722 217 LETGRFWFPAQVYNRENGHVGFM--LSCYDAE-LSYDQSTDTFQARYPPHGRRPIAIECGV 274 (351)
Q Consensus 217 LEsG~FWFPAQVYnRenghvGfm--LSCYDA~-lsYd~~TDTF~ARYpphGrr~~~ie~~i 274 (351)
+|.|-.|--.-||--++|.--+| +|--.|| +|||+.|-..--|----|+|.++-.+|.
T Consensus 62 iedggiwsrggvflsqdgrrvlmhefsgssaelvsydsatckvvhredisgqrwavdkdgl 122 (153)
T 4eqa_C 62 IEDGGIWSRGGVFLSQDGRRVLMHEFSGSSAELVSYDSATCKVVHREDISGQRWAVDKDGL 122 (153)
T ss_dssp ECSCCCEEEEEEEEETTSSEEEEEEEETTEEEEEEEETTTCCEEEEEECTTCEEEEETTEE
T ss_pred eecCcEeecCcEEEecCCceeeeeeccCCchheeeecCceeEEEeeccccCceEeeccccc
Confidence 78899999999999999986666 4555564 7999999998888888899988776654
No 210
>2daq_A WHSC1L1 protein, isoform long; PWWP domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.34.9.2
Probab=21.14 E-value=30 Score=27.37 Aligned_cols=27 Identities=19% Similarity=0.602 Sum_probs=20.5
Q ss_pred CCCCCCCeeEEEeeccCCCCccchhhhhcccc
Q 018722 298 NDLHPGDHIEIQWRRNKEFPYGWWYGVVGHLE 329 (351)
Q Consensus 298 ~dLkPGDHIEIQWRrnkefPYgWWYgvVGHle 329 (351)
..++|||.| |=+-+.|| ||=|.|=..+
T Consensus 7 ~~~~~GdlV---waK~~g~p--~WPa~V~~~~ 33 (110)
T 2daq_A 7 GKLHYKQIV---WVKLGNYR--WWPAEICNPR 33 (110)
T ss_dssp CSCCSSEEE---EEECSSSC--EEEEEECCTT
T ss_pred CCCCCCCEE---EEEeCCCC--CCceeeCChh
Confidence 357899977 77777755 9999986654
No 211
>1khc_A DNA cytosine-5 methyltransferase 3B2; five beta-sheets barrel followed by five-helix bundle; HET: DNA; 1.80A {Mus musculus} SCOP: b.34.9.2 PDB: 3flg_A* 3qkj_A*
Probab=20.75 E-value=35 Score=29.00 Aligned_cols=28 Identities=29% Similarity=0.783 Sum_probs=21.3
Q ss_pred CCCCCCCeeEEEeeccCCCCccchhhhhccccc
Q 018722 298 NDLHPGDHIEIQWRRNKEFPYGWWYGVVGHLES 330 (351)
Q Consensus 298 ~dLkPGDHIEIQWRrnkefPYgWWYgvVGHles 330 (351)
.++++||.| |=+-+.| .||=|.|=....
T Consensus 10 ~~~~~GDlV---WaKvkGy--PwWPa~V~~~~~ 37 (147)
T 1khc_A 10 KEFGIGDLV---WGKIKGF--SWWPAMVVSWKA 37 (147)
T ss_dssp SSCCTTCEE---EEEETTT--EEEEEEEECGGG
T ss_pred ccCcCCCEE---EEecCCc--CCCCEEeccchh
Confidence 479999988 8777765 599998865444
No 212
>2qyp_A Proactivator polypeptide; saposin, activator protein, alternative splicing, disease mutation, gaucher disease, glycoprotein, GM2- gangliosidosis; 2.45A {Homo sapiens} SCOP: a.64.1.1 PDB: 2z9a_A
Probab=20.01 E-value=47 Score=25.00 Aligned_cols=29 Identities=31% Similarity=0.670 Sum_probs=21.0
Q ss_pred HHHHHHHHccCChhhHHHHHhhcHHHHHh
Q 018722 98 ELVLECILEKLPPSGLCNMAAVCSSLRDR 126 (351)
Q Consensus 98 eelLd~ILs~LSP~DLcrmAaVCrsLRer 126 (351)
+.+++.+.+.++|.++|+.=..|.+=|-+
T Consensus 59 ~~ii~~l~~~~~P~~iC~~l~lC~~~~~~ 87 (91)
T 2qyp_A 59 SSILSILLEEVSPELVCSMLHLCSGTRHH 87 (91)
T ss_dssp HHHHHHHHHTCCHHHHHHTTTCC------
T ss_pred HHHHHHHHHcCCHHHHHhhcCCCCCcccc
Confidence 36888899999999999999999987754
Done!