Query 018724
Match_columns 351
No_of_seqs 155 out of 788
Neff 7.2
Searched_HMMs 13730
Date Mon Mar 25 05:05:14 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/018724.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/018724hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d2o14a2 c.23.10.8 (A:160-367) 97.2 0.00027 1.9E-08 59.6 7.2 92 176-307 70-161 (208)
2 d3dc7a1 c.23.10.9 (A:18-224) U 97.1 0.00039 2.8E-08 57.7 6.6 14 92-105 3-16 (207)
3 d3bzwa1 c.23.10.9 (A:38-285) U 84.7 0.16 1.2E-05 40.7 1.8 14 92-105 7-20 (248)
4 d1pvva2 c.78.1.1 (A:151-313) O 79.4 0.4 2.9E-05 38.4 2.3 25 91-117 2-26 (163)
5 d1otha2 c.78.1.1 (A:185-354) O 74.4 0.57 4.1E-05 37.5 1.8 25 91-117 2-26 (170)
6 d1vjga_ c.23.10.6 (A:) Hypothe 70.1 0.71 5.2E-05 36.3 1.4 41 177-230 72-112 (201)
7 d1yzfa1 c.23.10.5 (A:1-195) Li 64.9 0.91 6.6E-05 36.2 1.0 56 283-349 132-187 (195)
8 d1dxha2 c.78.1.1 (A:151-335) O 58.8 2.4 0.00018 34.2 2.6 27 91-118 3-29 (185)
9 d1pg5a2 c.78.1.1 (A:147-299) A 52.6 3.6 0.00026 32.0 2.6 28 91-118 1-28 (153)
10 d2hsja1 c.23.10.3 (A:1-211) Un 51.5 2.7 0.0002 33.9 1.8 126 177-348 82-210 (211)
11 d1fxwf_ c.23.10.3 (F:) Platele 50.1 3 0.00022 33.9 1.8 121 177-349 89-209 (212)
12 d1k7ca_ c.23.10.4 (A:) Rhamnog 50.0 25 0.0019 27.3 7.9 80 214-319 107-201 (233)
13 d2at2a2 c.78.1.1 (A:145-295) A 48.4 4.7 0.00034 31.4 2.7 27 92-118 2-28 (151)
14 d1vlva2 c.78.1.1 (A:153-313) O 47.7 5 0.00037 31.2 2.8 26 91-117 1-26 (161)
15 d1vcca_ d.121.1.1 (A:) Vaccini 46.0 1.3 9.4E-05 30.5 -1.0 15 94-108 55-70 (77)
16 d1jrla_ c.23.10.5 (A:) Thioest 45.9 3.6 0.00026 32.0 1.6 46 177-244 62-107 (179)
17 d1ekxa2 c.78.1.1 (A:151-310) A 45.3 4.2 0.00031 31.7 1.9 27 91-117 2-28 (160)
18 d1es9a_ c.23.10.3 (A:) Platele 45.2 5 0.00036 32.4 2.5 103 215-349 107-209 (212)
19 d1k7ca_ c.23.10.4 (A:) Rhamnog 43.0 3.7 0.00027 32.8 1.3 10 95-104 2-11 (233)
20 d2hsja1 c.23.10.3 (A:1-211) Un 39.6 74 0.0054 24.5 9.2 14 93-106 31-44 (211)
21 d1ml4a2 c.78.1.1 (A:152-308) A 39.5 5 0.00037 31.0 1.5 27 91-117 2-28 (157)
22 d1fxwf_ c.23.10.3 (F:) Platele 38.5 80 0.0058 24.5 9.3 16 92-107 33-48 (212)
23 d1duvg2 c.78.1.1 (G:151-333) O 37.6 8.9 0.00065 30.4 2.8 26 91-117 3-28 (183)
24 d1esca_ c.23.10.1 (A:) Esteras 33.5 1E+02 0.0074 24.7 9.5 31 214-246 155-185 (302)
25 d1gph11 c.61.1.1 (1:235-465) G 30.5 18 0.0013 30.1 3.7 30 89-118 100-130 (231)
26 d1p3da1 c.5.1.1 (A:11-106) UDP 24.9 11 0.00077 26.8 1.0 25 92-118 7-31 (96)
27 d1ecfa1 c.61.1.1 (A:250-492) G 23.4 23 0.0017 29.7 3.0 32 89-120 106-138 (243)
No 1
>d2o14a2 c.23.10.8 (A:160-367) Hypothetical protein YxiM {Bacillus subtilis [TaxId: 1423]}
Probab=97.25 E-value=0.00027 Score=59.55 Aligned_cols=92 Identities=10% Similarity=0.013 Sum_probs=48.1
Q ss_pred CCccEEEEcccccccccCCCcccceeccCccccccCcHHHHHHHHHHHHHHHHHhcCCCCCceEEEeecCCCCCCCCCCC
Q 018724 176 KDKDVLIFNTWHWWLHSGRKQEWDYIEDGSRTMRDMNRLVAFEKALNTWAKWVDANIDPTKTKVFYQGVSPDHTNATSWG 255 (351)
Q Consensus 176 ~~~DvlV~ntG~W~~~~~~~~~~~~~~~g~~~~~~~~~~~ay~~al~t~~~~v~~~~~~~~~~vf~Rt~sP~Hf~~g~W~ 255 (351)
...|+||+..|.-= ....+ ....+.|+..++++++-+.+ ....+++-+..| ++..
T Consensus 70 ~~~D~vvi~~G~ND----------~~~~~------~~~~~~~~~~l~~li~~~~~----~~~~~vl~~~~~-~~~~---- 124 (208)
T d2o14a2 70 KPGDYFMLQLGIND----------TNPKH------KESEAEFKEVMRDMIRQVKA----KGADVILSTPQG-RATD---- 124 (208)
T ss_dssp CTTCEEEEECCTGG----------GCGGG------CCCHHHHHHHHHHHHHHHHT----TTCEEEEECCCC-CTTC----
T ss_pred CCCCEEEEEcCCCc----------ccccc------cccHHHHHHHHHHHHHHHHh----cCCceeeccccc-cccc----
Confidence 44699999988431 11000 11246788888888887644 234455544333 2111
Q ss_pred CCCCCCCCCCCcccCcCCccCCCChhHHHHHHHHHhhCCCceEEeecccccc
Q 018724 256 HSNATKDCREETQPFIGHKYRRGSPAAELVVEKVISNMSKPVHLLGVTMLSQ 307 (351)
Q Consensus 256 ~g~~~g~C~~~t~P~~~~~~~~~~~~~~~~~~~~~~~~~~~v~lLdit~ls~ 307 (351)
........+ .....+.+++++.++. .+.++|++.++.
T Consensus 125 -----~~~~~~~~~--------~~~~~~~~~~~~a~~~--~v~~vD~~~~~~ 161 (208)
T d2o14a2 125 -----FTSEGIHSS--------VNRWYRASILALAEEE--KTYLIDLNVLSS 161 (208)
T ss_dssp -----BCTTSCBCC--------TTSTTHHHHHHHHHHT--TCEEECHHHHHH
T ss_pred -----cccccchHH--------HHHHHHHHHHHhhccC--CcEEeccHHHHH
Confidence 000001011 1122356677776664 588999887763
No 2
>d3dc7a1 c.23.10.9 (A:18-224) Uncharacterized protein Lp3323 {Lactobacillus plantarum [TaxId: 1590]}
Probab=97.09 E-value=0.00039 Score=57.72 Aligned_cols=14 Identities=29% Similarity=0.387 Sum_probs=12.1
Q ss_pred cCCeEEEEechhhH
Q 018724 92 QGKSILFVGDSLSL 105 (351)
Q Consensus 92 rgk~i~FVGDSl~R 105 (351)
..|||+|+|||++-
T Consensus 3 ~~kri~~iGDSit~ 16 (207)
T d3dc7a1 3 SFKRPAWLGDSITA 16 (207)
T ss_dssp CCSSEEEEESTTTS
T ss_pred CCCEEEEEehHhhc
Confidence 46899999999984
No 3
>d3bzwa1 c.23.10.9 (A:38-285) Uncharacterized protein BT2961 {Bacteroides thetaiotaomicron [TaxId: 818]}
Probab=84.69 E-value=0.16 Score=40.74 Aligned_cols=14 Identities=43% Similarity=0.793 Sum_probs=12.6
Q ss_pred cCCeEEEEechhhH
Q 018724 92 QGKSILFVGDSLSL 105 (351)
Q Consensus 92 rgk~i~FVGDSl~R 105 (351)
.||+|+|+|||++-
T Consensus 7 ~~kkI~~~GDS~T~ 20 (248)
T d3bzwa1 7 QGKKVGYIGDSITD 20 (248)
T ss_dssp TTCEEEEEESTTTC
T ss_pred CCCEEEEEehHHcc
Confidence 58999999999984
No 4
>d1pvva2 c.78.1.1 (A:151-313) Ornithine transcarbamoylase {Archaeon Pyrococcus furiosus [TaxId: 2261]}
Probab=79.36 E-value=0.4 Score=38.36 Aligned_cols=25 Identities=32% Similarity=0.383 Sum_probs=21.7
Q ss_pred HcCCeEEEEechhhHHHHHHHHHhhhh
Q 018724 91 HQGKSILFVGDSLSLNQWQSLTCMLHK 117 (351)
Q Consensus 91 lrgk~i~FVGDSl~Rn~~~SL~clL~~ 117 (351)
|.|++|+|||| .+|...|++-+|..
T Consensus 2 l~gl~Ia~VGD--~~nv~~Sli~~l~~ 26 (163)
T d1pvva2 2 IKGVKVVYVGD--GNNVAHSLMIAGTK 26 (163)
T ss_dssp CTTCEEEEESC--CCHHHHHHHHHHHH
T ss_pred cCCCEEEEECC--CcHHHHHHHHHHHH
Confidence 57999999999 67898999988865
No 5
>d1otha2 c.78.1.1 (A:185-354) Ornithine transcarbamoylase {Human (Homo sapiens) [TaxId: 9606]}
Probab=74.42 E-value=0.57 Score=37.54 Aligned_cols=25 Identities=24% Similarity=0.367 Sum_probs=20.7
Q ss_pred HcCCeEEEEechhhHHHHHHHHHhhhh
Q 018724 91 HQGKSILFVGDSLSLNQWQSLTCMLHK 117 (351)
Q Consensus 91 lrgk~i~FVGDSl~Rn~~~SL~clL~~ 117 (351)
|.|++|+|||| .+|-..||+-++..
T Consensus 2 l~gl~I~~vGD--~~nV~~Sli~~~~~ 26 (170)
T d1otha2 2 LKGLTLSWIGD--GNNILHSIMMSAAK 26 (170)
T ss_dssp CTTCEEEEESC--SSHHHHHHHTTTGG
T ss_pred CCCCEEEEEcC--chhHHHHHHHHHHH
Confidence 67999999999 36788999887754
No 6
>d1vjga_ c.23.10.6 (A:) Hypothetical protein alr1529 {Nostoc sp. pcc 7120 [TaxId: 103690]}
Probab=70.06 E-value=0.71 Score=36.35 Aligned_cols=41 Identities=7% Similarity=-0.077 Sum_probs=23.3
Q ss_pred CccEEEEcccccccccCCCcccceeccCccccccCcHHHHHHHHHHHHHHHHHh
Q 018724 177 DKDVLIFNTWHWWLHSGRKQEWDYIEDGSRTMRDMNRLVAFEKALNTWAKWVDA 230 (351)
Q Consensus 177 ~~DvlV~ntG~W~~~~~~~~~~~~~~~g~~~~~~~~~~~ay~~al~t~~~~v~~ 230 (351)
.+|+||+..|.--.... .+. .....+.|++.|+++++.+..
T Consensus 72 ~~d~vii~~G~ND~~~~---------~~~----~~~~~~~~~~~l~~~i~~~~~ 112 (201)
T d1vjga_ 72 YNSLVVFSFGLNDTTLE---------NGK----PRVSIAETIKNTREILTQAKK 112 (201)
T ss_dssp SEEEEEEECCHHHHCEE---------TTE----ESSCHHHHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCcccccc---------ccc----cCCCHHHHHHHHHHHHHHhhc
Confidence 48999999997532111 011 011235677777777665543
No 7
>d1yzfa1 c.23.10.5 (A:1-195) Lipase/acylhydrolase {Enterococcus faecalis [TaxId: 1351]}
Probab=64.94 E-value=0.91 Score=36.17 Aligned_cols=56 Identities=13% Similarity=0.199 Sum_probs=30.4
Q ss_pred HHHHHHHHhhCCCceEEeeccccccccccCCCCcccCCCCCCCCCccccccCCchHHHHHHHHHHHh
Q 018724 283 ELVVEKVISNMSKPVHLLGVTMLSQLRKDAHPSIYGGVGGHMEADCSHWCLAGVPDTWNQLLYATLV 349 (351)
Q Consensus 283 ~~~~~~~~~~~~~~v~lLdit~ls~~R~DgHp~~y~~~~~~~~~DC~HWClPG~~DtWn~lL~~~L~ 349 (351)
+++++++.++ .++.++|++......++ -+. + ...|++|.=--| ...|-+.|+..|.
T Consensus 132 ~~~~~~~a~~--~~v~~vd~~~~~~~~~~-~~~-~------~~~DgiHpn~~G-~~~~A~~i~~~i~ 187 (195)
T d1yzfa1 132 VKVAQEVGAA--HNLPVIDLYKAMTVYPG-TDE-F------LQADGLHFSQVG-YELLGALIVREIK 187 (195)
T ss_dssp HHHHHHHHHH--TTCCEECHHHHHHHSTT-GGG-G------BCTTSSSBCHHH-HHHHHHHHHHHHG
T ss_pred HHHHHHHHHh--hCCeEeehHHHHhccCC-Chh-h------cCCCCCCCCHHH-HHHHHHHHHHHHH
Confidence 5566666665 36899998765432211 111 1 135777743333 4666666666554
No 8
>d1dxha2 c.78.1.1 (A:151-335) Ornithine transcarbamoylase {Pseudomonas aeruginosa [TaxId: 287]}
Probab=58.78 E-value=2.4 Score=34.22 Aligned_cols=27 Identities=26% Similarity=0.221 Sum_probs=22.5
Q ss_pred HcCCeEEEEechhhHHHHHHHHHhhhhc
Q 018724 91 HQGKSILFVGDSLSLNQWQSLTCMLHKA 118 (351)
Q Consensus 91 lrgk~i~FVGDSl~Rn~~~SL~clL~~~ 118 (351)
|.|.+|+||||..+ |...|++-++...
T Consensus 3 l~~lkia~vGD~~n-nV~~Sli~~~~~~ 29 (185)
T d1dxha2 3 LHDISYAYLGDARN-NMGNSLLLIGAKL 29 (185)
T ss_dssp GGGCEEEEESCCSS-HHHHHHHHHHHHT
T ss_pred CCCCEEEEEcCCcc-hHHHHHHHHHHHc
Confidence 67899999999756 6999999888653
No 9
>d1pg5a2 c.78.1.1 (A:147-299) Aspartate carbamoyltransferase catalytic subunit {Archaeon Sulfolobus acidocaldarius [TaxId: 2285]}
Probab=52.65 E-value=3.6 Score=32.01 Aligned_cols=28 Identities=21% Similarity=0.210 Sum_probs=22.1
Q ss_pred HcCCeEEEEechhhHHHHHHHHHhhhhc
Q 018724 91 HQGKSILFVGDSLSLNQWQSLTCMLHKA 118 (351)
Q Consensus 91 lrgk~i~FVGDSl~Rn~~~SL~clL~~~ 118 (351)
|.|++|+||||...-+-..||+-+|...
T Consensus 1 l~gl~i~~vGD~~~sRv~~Sl~~~l~~~ 28 (153)
T d1pg5a2 1 IDGLVFALLGDLKYARTVNSLLRILTRF 28 (153)
T ss_dssp STTCEEEEEECCSSCHHHHHHHHHGGGS
T ss_pred CCCCEEEEECCCCccHHHHHHHHHHHHc
Confidence 4689999999976545888998887643
No 10
>d2hsja1 c.23.10.3 (A:1-211) Uncharacterized protein SP1450 {Streptococcus pneumoniae [TaxId: 1313]}
Probab=51.54 E-value=2.7 Score=33.94 Aligned_cols=126 Identities=14% Similarity=0.045 Sum_probs=62.0
Q ss_pred CccEEEEcccccccccCCCcccceeccCccccccCcHHHHHHHHHHHHHHHHHhcCCCCCceEEEeecCCCCCCCCCCCC
Q 018724 177 DKDVLIFNTWHWWLHSGRKQEWDYIEDGSRTMRDMNRLVAFEKALNTWAKWVDANIDPTKTKVFYQGVSPDHTNATSWGH 256 (351)
Q Consensus 177 ~~DvlV~ntG~W~~~~~~~~~~~~~~~g~~~~~~~~~~~ay~~al~t~~~~v~~~~~~~~~~vf~Rt~sP~Hf~~g~W~~ 256 (351)
.+|+||+..|.-=. . .+ .. .+.+...++.+++-+.+. .+.+.|++-+..|.-..
T Consensus 82 ~pd~vii~~G~ND~----------~-~~------~~-~~~~~~~~~~li~~i~~~--~p~~~i~v~~~~P~~~~------ 135 (211)
T d2hsja1 82 AVDKIFLLIGTNDI----------G-KD------VP-VNEALNNLEAIIQSVARD--YPLTEIKLLSILPVNER------ 135 (211)
T ss_dssp CCCEEEEECCHHHH----------H-TT------CC-HHHHHHHHHHHHHHHHHH--CTTCEEEEECCCCCCCS------
T ss_pred CCCEEEEEeCcchh----------c-cC------cc-hHHHHHhhhhhhhhhccc--cccceEEEeeecCCCcc------
Confidence 47999998874310 0 01 11 234555566666655443 34678999888876521
Q ss_pred CCCCCCCCCCcccCcCCccCCCC---hhHHHHHHHHHhhCCCceEEeeccccccccccCCCCcccCCCCCCCCCcccccc
Q 018724 257 SNATKDCREETQPFIGHKYRRGS---PAAELVVEKVISNMSKPVHLLGVTMLSQLRKDAHPSIYGGVGGHMEADCSHWCL 333 (351)
Q Consensus 257 g~~~g~C~~~t~P~~~~~~~~~~---~~~~~~~~~~~~~~~~~v~lLdit~ls~~R~DgHp~~y~~~~~~~~~DC~HWCl 333 (351)
+ ....+. ..... ...++.++++.++ ...+.++|++....- .++.+... ...|.+|-=-
T Consensus 136 ------~-~~~~~~----~~~~~~~i~~~n~~~~~~a~~-~~~v~~iD~~~~~~~-~~g~~~~~------~~~DglHpn~ 196 (211)
T d2hsja1 136 ------E-EYQQAV----YIRSNEKIQNWNQAYQELASA-YMQVEFVPVFDCLTD-QAGQLKKE------YTTDGLHLSI 196 (211)
T ss_dssp ------G-GGHHHH----TTCCHHHHHHHHHHHHHHHTT-CTTEEEECCGGGSBC-TTSSBCGG------GBSSSSSBCH
T ss_pred ------c-ccchhh----hhhHHHHHHHHHHHHHHHHHh-hCCeeEeehhHHHhc-ccCCCchh------hCCCCCCcCH
Confidence 1 000000 00000 1224445554433 246999999875421 23332111 1257777332
Q ss_pred CCchHHHHHHHHHHH
Q 018724 334 AGVPDTWNQLLYATL 348 (351)
Q Consensus 334 PG~~DtWn~lL~~~L 348 (351)
-| ...|-+.|...|
T Consensus 197 ~G-y~~~a~~i~~~L 210 (211)
T d2hsja1 197 AG-YQALSKSLKDYL 210 (211)
T ss_dssp HH-HHHHHHHHHHHH
T ss_pred HH-HHHHHHHHHHHh
Confidence 23 355666666655
No 11
>d1fxwf_ c.23.10.3 (F:) Platelet-activating factor acetylhydrolase {Cow (Bos taurus), alpha2 [TaxId: 9913]}
Probab=50.06 E-value=3 Score=33.87 Aligned_cols=121 Identities=12% Similarity=0.129 Sum_probs=60.5
Q ss_pred CccEEEEcccccccccCCCcccceeccCccccccCcHHHHHHHHHHHHHHHHHhcCCCCCceEEEeecCCCCCCCCCCCC
Q 018724 177 DKDVLIFNTWHWWLHSGRKQEWDYIEDGSRTMRDMNRLVAFEKALNTWAKWVDANIDPTKTKVFYQGVSPDHTNATSWGH 256 (351)
Q Consensus 177 ~~DvlV~ntG~W~~~~~~~~~~~~~~~g~~~~~~~~~~~ay~~al~t~~~~v~~~~~~~~~~vf~Rt~sP~Hf~~g~W~~ 256 (351)
.+|+||+..|.= .. +. . .+.+...++.+++.+.+. .+++.|++-+..|.--
T Consensus 89 ~P~~vvi~~G~N----D~---------~~------~-~~~~~~~~~~~i~~i~~~--~p~~~Ii~~~~~P~~~------- 139 (212)
T d1fxwf_ 89 KPKVIVVWVGTN----NH---------EN------T-AEEVAGGIEAIVQLINTR--QPQAKIIVLGLLPRGE------- 139 (212)
T ss_dssp CCSEEEEECCTT----CT---------TS------C-HHHHHHHHHHHHHHHHHH--CTTCEEEEECCCCCSS-------
T ss_pred CCCEEEEEeccc----cc---------cc------c-cHHHHHHHHHHHHHHHHH--hccccccceeeccccc-------
Confidence 479999988732 00 11 1 234456666666666543 3467788888777430
Q ss_pred CCCCCCCCCCcccCcCCccCCCChhHHHHHHHHHhhCCCceEEeeccccccccccCCCCcccCCCCCCCCCccccccCCc
Q 018724 257 SNATKDCREETQPFIGHKYRRGSPAAELVVEKVISNMSKPVHLLGVTMLSQLRKDAHPSIYGGVGGHMEADCSHWCLAGV 336 (351)
Q Consensus 257 g~~~g~C~~~t~P~~~~~~~~~~~~~~~~~~~~~~~~~~~v~lLdit~ls~~R~DgHp~~y~~~~~~~~~DC~HWClPG~ 336 (351)
...++. ......++.+++.+++ ..++.++|++.... .+|+-+.. ....|-+| -.+-=
T Consensus 140 ---------~~~~~~-----~~~~~~n~~l~~~~a~-~~~v~~iD~~~~l~-~~~g~~~~------~~~~DGlH-pn~~G 196 (212)
T d1fxwf_ 140 ---------KPNPLR-----QKNAKVNQLLKVSLPK-LANVQLLDTDGGFV-HSDGAISC------HDMFDFLH-LTGGG 196 (212)
T ss_dssp ---------SCCHHH-----HHHHHHHHHHHHHSSS-SSSEEEECCCCSCB-CTTSCBCT------TTBTTSSS-BCHHH
T ss_pred ---------ccchHH-----HHHHHHHHHHHHHHHH-hcCceEeeccHHHh-cccCCCCh------hhCCCCCC-CCHHH
Confidence 111110 0001123333332222 24799999987542 22332111 12257787 22223
Q ss_pred hHHHHHHHHHHHh
Q 018724 337 PDTWNQLLYATLV 349 (351)
Q Consensus 337 ~DtWn~lL~~~L~ 349 (351)
...|-+.|+..|.
T Consensus 197 y~~~a~~i~~~L~ 209 (212)
T d1fxwf_ 197 YAKICKPLHELIM 209 (212)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH
Confidence 5666666666654
No 12
>d1k7ca_ c.23.10.4 (A:) Rhamnogalacturonan acetylesterase {Fungus (Aspergillus aculeatus) [TaxId: 5053]}
Probab=50.01 E-value=25 Score=27.28 Aligned_cols=80 Identities=18% Similarity=0.154 Sum_probs=45.9
Q ss_pred HHHHHHHHHHHHHHHHhcCCCCCceEEEeecCCCCCCCCCCCCCCCCCCCCCCcccCcCCccCCCChhHHHHHHHHHhhC
Q 018724 214 LVAFEKALNTWAKWVDANIDPTKTKVFYQGVSPDHTNATSWGHSNATKDCREETQPFIGHKYRRGSPAAELVVEKVISNM 293 (351)
Q Consensus 214 ~~ay~~al~t~~~~v~~~~~~~~~~vf~Rt~sP~Hf~~g~W~~g~~~g~C~~~t~P~~~~~~~~~~~~~~~~~~~~~~~~ 293 (351)
+..|+..|+++++.+.+ ....+++-+..|.-... . ..+.......++.++++.++.
T Consensus 107 ~~~~~~~l~~~i~~~~~----~~~~~i~~~~~~~~~~~----~----------------~~~~~~~~~~~~~~~~~a~~~ 162 (233)
T d1k7ca_ 107 ILTFPAYLENAAKLFTA----KGAKVILSSQTPNNPWE----T----------------GTFVNSPTRFVEYAELAAEVA 162 (233)
T ss_dssp EEBHHHHHHHHHHHHHH----TTCEEEEECCCCCCTTT----T----------------SSCCCCCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHh----cCCEEEEEecCcccccc----c----------------cchhhhHHHHHHHHHHHHHHc
Confidence 34577778777776543 24567776665543211 0 011111123456667766653
Q ss_pred CCceEEeecccccc--------------ccccC-CCCcccC
Q 018724 294 SKPVHLLGVTMLSQ--------------LRKDA-HPSIYGG 319 (351)
Q Consensus 294 ~~~v~lLdit~ls~--------------~R~Dg-Hp~~y~~ 319 (351)
++.++|++.++. +.+|+ ||+..+.
T Consensus 163 --~v~~iDl~~~~~~~~~~~~~~~~~~~~~~DgiHpn~~G~ 201 (233)
T d1k7ca_ 163 --GVEYVDHWSYVDSIYETLGNATVNSYFPIDHTHTSPAGA 201 (233)
T ss_dssp --TCEEECHHHHHHHHHHHHCHHHHHHTCSSSSSCCCHHHH
T ss_pred --CCCeeeHHHHHHHHHHHcCchhhhhhcCCCCcCCCHHHH
Confidence 589999877652 45788 9886643
No 13
>d2at2a2 c.78.1.1 (A:145-295) Aspartate carbamoyltransferase catalytic subunit {Bacillus subtilis [TaxId: 1423]}
Probab=48.40 E-value=4.7 Score=31.38 Aligned_cols=27 Identities=19% Similarity=0.161 Sum_probs=22.6
Q ss_pred cCCeEEEEechhhHHHHHHHHHhhhhc
Q 018724 92 QGKSILFVGDSLSLNQWQSLTCMLHKA 118 (351)
Q Consensus 92 rgk~i~FVGDSl~Rn~~~SL~clL~~~ 118 (351)
.|.+|+||||...-+-..||+-++...
T Consensus 2 ~gl~i~~vGD~~~srv~~Sl~~~~~~~ 28 (151)
T d2at2a2 2 KGLTVSIHGDIKHSRVARSNAEVLTRL 28 (151)
T ss_pred CCCEEEEEcCCCCCHHHHHHHHHHHHc
Confidence 589999999988767888998888654
No 14
>d1vlva2 c.78.1.1 (A:153-313) Ornithine transcarbamoylase {Thermotoga maritima [TaxId: 2336]}
Probab=47.75 E-value=5 Score=31.21 Aligned_cols=26 Identities=31% Similarity=0.424 Sum_probs=20.6
Q ss_pred HcCCeEEEEechhhHHHHHHHHHhhhh
Q 018724 91 HQGKSILFVGDSLSLNQWQSLTCMLHK 117 (351)
Q Consensus 91 lrgk~i~FVGDSl~Rn~~~SL~clL~~ 117 (351)
|+|++|+||||=-+ |-..|++-++..
T Consensus 1 l~g~ki~~vGD~~n-nV~~Sli~~~~~ 26 (161)
T d1vlva2 1 LKGVKVVFMGDTRN-NVATSLMIACAK 26 (161)
T ss_dssp STTCEEEEESCTTS-HHHHHHHHHHHH
T ss_pred CCCCEEEEEcCCcc-HHHHHHHHHHHH
Confidence 57999999999313 688899987764
No 15
>d1vcca_ d.121.1.1 (A:) Vaccinia DNA topoisomerase I, 9 kDa N-terminal fragment {Vaccinia virus, strain WR [TaxId: 10245]}
Probab=45.98 E-value=1.3 Score=30.52 Aligned_cols=15 Identities=40% Similarity=0.725 Sum_probs=12.3
Q ss_pred CeEEEEe-chhhHHHH
Q 018724 94 KSILFVG-DSLSLNQW 108 (351)
Q Consensus 94 k~i~FVG-DSl~Rn~~ 108 (351)
.+++||| ||-+|.||
T Consensus 55 ~~LIfvG~DSKgrkQY 70 (77)
T d1vcca_ 55 TRLIFVGSDSKGRRQY 70 (77)
T ss_dssp TSEEEEEECTTSCEEE
T ss_pred CceEEEeecCCCceEE
Confidence 4599999 88888775
No 16
>d1jrla_ c.23.10.5 (A:) Thioesterase I, TAP {Escherichia coli [TaxId: 562]}
Probab=45.89 E-value=3.6 Score=31.98 Aligned_cols=46 Identities=11% Similarity=0.025 Sum_probs=27.1
Q ss_pred CccEEEEcccccccccCCCcccceeccCccccccCcHHHHHHHHHHHHHHHHHhcCCCCCceEEEeec
Q 018724 177 DKDVLIFNTWHWWLHSGRKQEWDYIEDGSRTMRDMNRLVAFEKALNTWAKWVDANIDPTKTKVFYQGV 244 (351)
Q Consensus 177 ~~DvlV~ntG~W~~~~~~~~~~~~~~~g~~~~~~~~~~~ay~~al~t~~~~v~~~~~~~~~~vf~Rt~ 244 (351)
.+|+||+..|.-=. +. + .. .+.+++.++.+++.+.+ ...+|++-+.
T Consensus 62 ~pd~vii~~G~ND~----------~~-~------~~-~~~~~~~~~~~i~~~~~----~~~~vil~~~ 107 (179)
T d1jrla_ 62 QPRWVLVELGGNDG----------LR-G------FQ-PQQTEQTLRQILQDVKA----ANAEPLLMQI 107 (179)
T ss_dssp CCSEEEEECCTTTT----------TT-T------CC-HHHHHHHHHHHHHHHHH----TTCEEEEECC
T ss_pred CCcEEEEEEecccc----------cc-c------cc-hhhhhhhHHHHHHHHHh----ccCcEEEEec
Confidence 36999999985311 11 1 11 35677777777766644 2456776554
No 17
>d1ekxa2 c.78.1.1 (A:151-310) Aspartate carbamoyltransferase catalytic subunit {Escherichia coli [TaxId: 562]}
Probab=45.34 E-value=4.2 Score=31.71 Aligned_cols=27 Identities=30% Similarity=0.196 Sum_probs=20.6
Q ss_pred HcCCeEEEEechhhHHHHHHHHHhhhh
Q 018724 91 HQGKSILFVGDSLSLNQWQSLTCMLHK 117 (351)
Q Consensus 91 lrgk~i~FVGDSl~Rn~~~SL~clL~~ 117 (351)
+.|.+|+||||...=+-..||+-+|..
T Consensus 2 l~gl~i~~vGD~~nsrv~~Sli~~l~~ 28 (160)
T d1ekxa2 2 LDNLHVAMVGDLKYGRTVHSLTQALAK 28 (160)
T ss_dssp SSSCEEEEESCTTTCHHHHHHHHHHTT
T ss_pred CCCCEEEEEcCCCccHHHHHHHHHHHH
Confidence 579999999997754566787776653
No 18
>d1es9a_ c.23.10.3 (A:) Platelet-activating factor acetylhydrolase {Cow (Bos taurus), alpha1 [TaxId: 9913]}
Probab=45.20 E-value=5 Score=32.37 Aligned_cols=103 Identities=15% Similarity=0.138 Sum_probs=51.8
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCceEEEeecCCCCCCCCCCCCCCCCCCCCCCcccCcCCccCCCChhHHHHHHHHHhhCC
Q 018724 215 VAFEKALNTWAKWVDANIDPTKTKVFYQGVSPDHTNATSWGHSNATKDCREETQPFIGHKYRRGSPAAELVVEKVISNMS 294 (351)
Q Consensus 215 ~ay~~al~t~~~~v~~~~~~~~~~vf~Rt~sP~Hf~~g~W~~g~~~g~C~~~t~P~~~~~~~~~~~~~~~~~~~~~~~~~ 294 (351)
+.+...++++++.+.+. .+++.|++-+..|.=. ...+..+ .....++.+++.+++ .
T Consensus 107 ~~~~~~~~~ii~~l~~~--~p~~~Ii~~~~~p~~~----------------~~~~~~~-----~~~~~n~~~~~~~a~-~ 162 (212)
T d1es9a_ 107 EQVTGGIKAIVQLVNER--QPQARVVVLGLLPRGQ----------------HPNPLRE-----KNRRVNELVRAALAG-H 162 (212)
T ss_dssp HHHHHHHHHHHHHHHHH--STTCEEEEECCCCCSS----------------SCCHHHH-----HHHHHHHHHHHHHHS-C
T ss_pred HHHHHHHHHHHHHHHHh--hccccccceeeeeccc----------------chhhHHH-----HHHHHHHHHHHHHhh-c
Confidence 34556666666666543 3467788888776420 1111100 001224445444433 2
Q ss_pred CceEEeeccccccccccCCCCcccCCCCCCCCCccccccCCchHHHHHHHHHHHh
Q 018724 295 KPVHLLGVTMLSQLRKDAHPSIYGGVGGHMEADCSHWCLAGVPDTWNQLLYATLV 349 (351)
Q Consensus 295 ~~v~lLdit~ls~~R~DgHp~~y~~~~~~~~~DC~HWClPG~~DtWn~lL~~~L~ 349 (351)
.++.++|++.... -.||..... ...|-+|-=--| ...|-+.|...|.
T Consensus 163 ~~~~~id~~~~~~-~~~g~~~~~------~~~DgvHpn~~G-y~~~a~~i~~~L~ 209 (212)
T d1es9a_ 163 PRAHFLDADPGFV-HSDGTISHH------DMYDYLHLSRLG-YTPVCRALHSLLL 209 (212)
T ss_dssp TTEEEECCCCCCS-CTTSCCCTT------TBTTSSSBCHHH-HHHHHHHHHHHHH
T ss_pred CceeeccchHHHh-CcCCCCChh------hCCCCCCCCHHH-HHHHHHHHHHHHH
Confidence 5799999987542 234432211 135777732222 4566666666654
No 19
>d1k7ca_ c.23.10.4 (A:) Rhamnogalacturonan acetylesterase {Fungus (Aspergillus aculeatus) [TaxId: 5053]}
Probab=42.97 E-value=3.7 Score=32.76 Aligned_cols=10 Identities=30% Similarity=0.584 Sum_probs=9.1
Q ss_pred eEEEEechhh
Q 018724 95 SILFVGDSLS 104 (351)
Q Consensus 95 ~i~FVGDSl~ 104 (351)
+|+|+|||++
T Consensus 2 ti~~~GDS~~ 11 (233)
T d1k7ca_ 2 TVYLAGDSTM 11 (233)
T ss_dssp EEEEECCTTT
T ss_pred EEEEEehhhc
Confidence 7999999986
No 20
>d2hsja1 c.23.10.3 (A:1-211) Uncharacterized protein SP1450 {Streptococcus pneumoniae [TaxId: 1313]}
Probab=39.62 E-value=74 Score=24.54 Aligned_cols=14 Identities=43% Similarity=0.684 Sum_probs=11.5
Q ss_pred CCeEEEEechhhHH
Q 018724 93 GKSILFVGDSLSLN 106 (351)
Q Consensus 93 gk~i~FVGDSl~Rn 106 (351)
...|+|+|||++..
T Consensus 31 ~~~ivf~GDSit~~ 44 (211)
T d2hsja1 31 EPNILFIGDSIVEY 44 (211)
T ss_dssp CCSEEEEESHHHHT
T ss_pred CCCEEEEECHHHcC
Confidence 45699999999964
No 21
>d1ml4a2 c.78.1.1 (A:152-308) Aspartate carbamoyltransferase catalytic subunit {Archaeon Pyrococcus abyssi [TaxId: 29292]}
Probab=39.48 E-value=5 Score=31.00 Aligned_cols=27 Identities=26% Similarity=0.124 Sum_probs=20.5
Q ss_pred HcCCeEEEEechhhHHHHHHHHHhhhh
Q 018724 91 HQGKSILFVGDSLSLNQWQSLTCMLHK 117 (351)
Q Consensus 91 lrgk~i~FVGDSl~Rn~~~SL~clL~~ 117 (351)
|.|++|+||||=..=+-..||+-++..
T Consensus 2 l~gl~i~~vGD~~~srV~~Sli~~~~~ 28 (157)
T d1ml4a2 2 IDGLKIGLLGDLKYGRTVHSLAEALTF 28 (157)
T ss_dssp SSSEEEEEESCTTTCHHHHHHHHHGGG
T ss_pred cCCCEEEEEcCCccChHHHHHHHHHHh
Confidence 679999999995533456788887764
No 22
>d1fxwf_ c.23.10.3 (F:) Platelet-activating factor acetylhydrolase {Cow (Bos taurus), alpha2 [TaxId: 9913]}
Probab=38.49 E-value=80 Score=24.50 Aligned_cols=16 Identities=38% Similarity=0.580 Sum_probs=12.6
Q ss_pred cCCeEEEEechhhHHH
Q 018724 92 QGKSILFVGDSLSLNQ 107 (351)
Q Consensus 92 rgk~i~FVGDSl~Rn~ 107 (351)
+.-+|+|+|||++..+
T Consensus 33 ~~~~vvf~GDSit~g~ 48 (212)
T d1fxwf_ 33 KEPDVLFVGDSMVQLM 48 (212)
T ss_dssp CCCSEEEEESHHHHGG
T ss_pred CCCCEEEEeChHHhCC
Confidence 4455999999999754
No 23
>d1duvg2 c.78.1.1 (G:151-333) Ornithine transcarbamoylase {Escherichia coli [TaxId: 562]}
Probab=37.58 E-value=8.9 Score=30.42 Aligned_cols=26 Identities=15% Similarity=0.209 Sum_probs=20.3
Q ss_pred HcCCeEEEEechhhHHHHHHHHHhhhh
Q 018724 91 HQGKSILFVGDSLSLNQWQSLTCMLHK 117 (351)
Q Consensus 91 lrgk~i~FVGDSl~Rn~~~SL~clL~~ 117 (351)
+.|-+|+||||.-+ |...||+-+++.
T Consensus 3 ~~~l~i~~vGD~~n-nv~~Sli~~~~~ 28 (183)
T d1duvg2 3 FNEMTLVYAGDARN-NMGNSMLEAAAL 28 (183)
T ss_dssp GGGCEEEEESCTTS-HHHHHHHHHHHH
T ss_pred cCCCEEEEEcCCcc-HHHHHHHHHHHH
Confidence 56789999999545 688898877754
No 24
>d1esca_ c.23.10.1 (A:) Esterase {Streptomyces scabies [TaxId: 1930]}
Probab=33.45 E-value=1e+02 Score=24.73 Aligned_cols=31 Identities=10% Similarity=0.050 Sum_probs=22.4
Q ss_pred HHHHHHHHHHHHHHHHhcCCCCCceEEEeecCC
Q 018724 214 LVAFEKALNTWAKWVDANIDPTKTKVFYQGVSP 246 (351)
Q Consensus 214 ~~ay~~al~t~~~~v~~~~~~~~~~vf~Rt~sP 246 (351)
+..|+..|+++++.|.+. .++.+|++-++..
T Consensus 155 ~~~~~~~l~~~~~~i~~~--~p~a~iv~~~y~~ 185 (302)
T d1esca_ 155 FERVGAELEELLDRIGYF--APDAKRVLVGYPR 185 (302)
T ss_dssp HHHHHHHHHHHHHHHHHH--STTCEEEEECCCC
T ss_pred HHHHHHHHHHHHHHHHHH--CCCCeEEEecCcc
Confidence 556888888888888653 3567888877653
No 25
>d1gph11 c.61.1.1 (1:235-465) Glutamine PRPP amidotransferase, C-terminal domain {Bacillus subtilis [TaxId: 1423]}
Probab=30.46 E-value=18 Score=30.11 Aligned_cols=30 Identities=27% Similarity=0.364 Sum_probs=24.6
Q ss_pred HHHcCCeEEEEechhhHH-HHHHHHHhhhhc
Q 018724 89 LRHQGKSILFVGDSLSLN-QWQSLTCMLHKA 118 (351)
Q Consensus 89 ~~lrgk~i~FVGDSl~Rn-~~~SL~clL~~~ 118 (351)
+.++||+|++|=||+-|. ....++.||..+
T Consensus 100 ~~i~gK~vvlVDDSIVRGtT~k~iv~~lr~a 130 (231)
T d1gph11 100 GVVEGKRVVMVDDSIVRGTTSRRIVTMLREA 130 (231)
T ss_dssp HHHTTCEEEEEESCCSSSHHHHHHHHHHHHT
T ss_pred heeccCceEEeehhhhccchHHHHHHHHHHc
Confidence 568999999999999984 455788888754
No 26
>d1p3da1 c.5.1.1 (A:11-106) UDP-N-acetylmuramate-alanine ligase MurC {Haemophilus influenzae [TaxId: 727]}
Probab=24.93 E-value=11 Score=26.84 Aligned_cols=25 Identities=16% Similarity=0.290 Sum_probs=20.9
Q ss_pred cCCeEEEEechhhHHHHHHHHHhhhhc
Q 018724 92 QGKSILFVGDSLSLNQWQSLTCMLHKA 118 (351)
Q Consensus 92 rgk~i~FVGDSl~Rn~~~SL~clL~~~ 118 (351)
+.|++-||| ++.-=+-+|+++|...
T Consensus 7 ~~~~ihfiG--igG~GMs~LA~~L~~~ 31 (96)
T d1p3da1 7 RVQQIHFIG--IGGAGMSGIAEILLNE 31 (96)
T ss_dssp TCCEEEEET--TTSTTHHHHHHHHHHH
T ss_pred hCCEEEEEE--ECHHHHHHHHHHHHhC
Confidence 578999999 8888888899888764
No 27
>d1ecfa1 c.61.1.1 (A:250-492) Glutamine PRPP amidotransferase, C-terminal domain {Escherichia coli [TaxId: 562]}
Probab=23.41 E-value=23 Score=29.67 Aligned_cols=32 Identities=22% Similarity=0.277 Sum_probs=25.6
Q ss_pred HHHcCCeEEEEechhhHH-HHHHHHHhhhhcCC
Q 018724 89 LRHQGKSILFVGDSLSLN-QWQSLTCMLHKAVP 120 (351)
Q Consensus 89 ~~lrgk~i~FVGDSl~Rn-~~~SL~clL~~~~~ 120 (351)
..++||+|++|=||+-|. ....++.+|..+-+
T Consensus 106 ~~i~gk~vvlVDDSIVRGtT~k~iv~~L~~~ga 138 (243)
T d1ecfa1 106 AEFRDKNVLLVDDSIVRGTTSEQIIEMAREAGA 138 (243)
T ss_dssp GGTTTCCEEEEESCCSSSHHHHHHHHHHHHTTC
T ss_pred heeccceEEEEhhHHHhhhhHHHHHHHHHHcCC
Confidence 457999999999999984 56678888886433
Done!