Query 018729
Match_columns 351
No_of_seqs 284 out of 2153
Neff 8.0
Searched_HMMs 29240
Date Mon Mar 25 05:09:49 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/018729.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/018729hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3oi8_A Uncharacterized protein 100.0 1.7E-28 5.8E-33 208.4 12.7 154 166-325 2-156 (156)
2 3lhh_A CBS domain protein; str 100.0 7.7E-29 2.6E-33 214.0 9.0 165 165-335 5-170 (172)
3 3ocm_A Putative membrane prote 99.9 2E-26 6.8E-31 199.5 10.5 152 183-337 13-165 (173)
4 3lv9_A Putative transporter; C 99.9 1.6E-26 5.4E-31 194.0 8.0 145 185-331 2-147 (148)
5 3oco_A Hemolysin-like protein 99.9 6.7E-25 2.3E-29 185.3 3.5 145 189-335 3-149 (153)
6 3jtf_A Magnesium and cobalt ef 99.9 2.1E-23 7E-28 171.1 9.4 127 203-331 2-128 (129)
7 3lfr_A Putative metal ION tran 99.9 9.4E-23 3.2E-27 168.8 9.6 129 204-334 1-132 (136)
8 3hf7_A Uncharacterized CBS-dom 99.9 3.8E-23 1.3E-27 169.9 6.3 125 205-331 1-129 (130)
9 3k6e_A CBS domain protein; str 99.9 5.7E-23 1.9E-27 174.7 6.1 139 196-338 4-151 (156)
10 3kxr_A Magnesium transporter, 99.9 5.1E-22 1.7E-26 176.5 12.5 148 167-330 25-175 (205)
11 3i8n_A Uncharacterized protein 99.9 9.8E-23 3.3E-27 167.2 5.7 127 202-330 2-130 (130)
12 3nqr_A Magnesium and cobalt ef 99.9 5.2E-22 1.8E-26 162.1 8.8 125 204-330 1-127 (127)
13 2yvy_A MGTE, Mg2+ transporter 99.8 1.8E-20 6.1E-25 173.9 10.3 142 187-334 116-262 (278)
14 2zy9_A Mg2+ transporter MGTE; 99.8 9.7E-20 3.3E-24 181.1 11.6 154 166-329 110-277 (473)
15 4esy_A CBS domain containing m 99.8 3.9E-19 1.3E-23 152.5 10.9 134 192-332 6-165 (170)
16 3ctu_A CBS domain protein; str 99.8 2E-19 7E-24 151.6 6.2 135 198-336 7-149 (156)
17 2emq_A Hypothetical conserved 99.8 5.1E-19 1.7E-23 149.1 8.3 136 197-336 2-146 (157)
18 4gqw_A CBS domain-containing p 99.8 8.4E-19 2.9E-23 146.3 8.0 127 204-332 3-146 (152)
19 3lqn_A CBS domain protein; csg 99.8 4.3E-19 1.5E-23 148.5 4.9 128 201-332 10-146 (150)
20 2oux_A Magnesium transporter; 99.7 1.6E-18 5.5E-23 161.5 9.1 136 188-329 119-259 (286)
21 2qrd_G Protein C1556.08C; AMPK 99.7 1E-18 3.4E-23 165.3 7.7 140 188-328 3-171 (334)
22 3kpb_A Uncharacterized protein 99.7 9.3E-19 3.2E-23 141.1 6.2 120 206-329 1-120 (122)
23 3fhm_A Uncharacterized protein 99.7 1.7E-18 5.8E-23 147.7 7.0 135 199-336 17-157 (165)
24 2yzi_A Hypothetical protein PH 99.7 8.8E-18 3E-22 138.4 9.7 128 201-333 2-133 (138)
25 2ef7_A Hypothetical protein ST 99.7 4E-18 1.4E-22 139.5 7.0 125 203-332 1-128 (133)
26 2v8q_E 5'-AMP-activated protei 99.7 1.5E-18 5.1E-23 164.0 4.6 143 183-328 14-176 (330)
27 3gby_A Uncharacterized protein 99.7 6.4E-18 2.2E-22 137.8 7.4 121 204-329 3-126 (128)
28 3k2v_A Putative D-arabinose 5- 99.7 5.1E-18 1.8E-22 142.1 6.9 118 206-326 28-149 (149)
29 1yav_A Hypothetical protein BS 99.7 2.6E-18 9E-23 145.4 5.1 133 202-338 10-151 (159)
30 3sl7_A CBS domain-containing p 99.7 4.9E-18 1.7E-22 146.0 6.8 123 205-329 3-156 (180)
31 2rih_A Conserved protein with 99.7 1.7E-17 5.9E-22 137.4 8.8 118 206-328 5-127 (141)
32 2rc3_A CBS domain; in SITU pro 99.7 9.5E-18 3.2E-22 137.8 6.6 122 205-330 4-132 (135)
33 2p9m_A Hypothetical protein MJ 99.7 1.7E-17 5.8E-22 136.5 7.0 123 203-329 5-136 (138)
34 3t4n_C Nuclear protein SNF4; C 99.7 4.1E-18 1.4E-22 160.4 3.7 143 185-328 8-176 (323)
35 1pvm_A Conserved hypothetical 99.7 4.6E-17 1.6E-21 141.3 9.6 120 206-329 9-133 (184)
36 4fry_A Putative signal-transdu 99.7 3E-17 1E-21 138.4 7.2 128 206-337 7-143 (157)
37 3org_A CMCLC; transporter, tra 99.7 2E-17 6.8E-22 170.0 7.0 126 204-332 451-628 (632)
38 1y5h_A Hypothetical protein RV 99.7 3E-17 1E-21 134.3 6.2 123 203-330 5-132 (133)
39 3fv6_A YQZB protein; CBS domai 99.7 4.9E-17 1.7E-21 137.7 7.4 122 203-329 14-144 (159)
40 1pbj_A Hypothetical protein; s 99.7 4.6E-17 1.6E-21 131.4 6.5 118 206-329 1-122 (125)
41 4fxs_A Inosine-5'-monophosphat 99.7 2.8E-17 9.7E-22 163.9 6.3 150 165-328 52-208 (496)
42 1o50_A CBS domain-containing p 99.7 5.1E-17 1.7E-21 137.2 6.8 124 202-331 12-155 (157)
43 2nyc_A Nuclear protein SNF4; b 99.7 4.5E-17 1.5E-21 134.7 5.8 123 203-329 5-141 (144)
44 2j9l_A Chloride channel protei 99.7 4.3E-17 1.5E-21 140.8 5.0 127 204-332 9-168 (185)
45 2o16_A Acetoin utilization pro 99.7 9.3E-17 3.2E-21 136.2 6.5 121 204-329 3-135 (160)
46 2uv4_A 5'-AMP-activated protei 99.6 1.6E-16 5.5E-21 133.4 7.2 121 203-329 20-151 (152)
47 2pfi_A Chloride channel protei 99.6 9.3E-17 3.2E-21 135.8 5.4 130 197-330 4-148 (164)
48 1zfj_A Inosine monophosphate d 99.6 3.7E-16 1.3E-20 156.1 9.9 151 166-329 54-211 (491)
49 3ddj_A CBS domain-containing p 99.6 1.9E-16 6.4E-21 147.2 7.1 148 166-328 64-213 (296)
50 3usb_A Inosine-5'-monophosphat 99.6 4.1E-16 1.4E-20 156.1 9.2 150 166-329 77-234 (511)
51 3kh5_A Protein MJ1225; AMPK, A 99.6 2.8E-16 9.7E-21 144.1 5.3 151 166-328 51-204 (280)
52 1me8_A Inosine-5'-monophosphat 99.6 2E-16 6.8E-21 158.3 3.0 153 166-331 61-223 (503)
53 1vr9_A CBS domain protein/ACT 99.6 4.4E-15 1.5E-19 132.2 10.3 119 205-329 12-130 (213)
54 2cu0_A Inosine-5'-monophosphat 99.6 2.5E-16 8.6E-21 157.1 1.9 146 166-328 57-207 (486)
55 4avf_A Inosine-5'-monophosphat 99.6 5.5E-16 1.9E-20 154.5 2.5 149 166-329 52-207 (490)
56 3kh5_A Protein MJ1225; AMPK, A 99.6 5.9E-15 2E-19 135.2 8.9 119 209-330 7-143 (280)
57 3t4n_C Nuclear protein SNF4; C 99.5 5.2E-15 1.8E-19 139.1 7.5 125 202-330 183-321 (323)
58 3pc3_A CG1753, isoform A; CBS, 99.5 3.5E-15 1.2E-19 150.2 6.5 125 203-332 381-514 (527)
59 2yzq_A Putative uncharacterize 99.5 5.8E-15 2E-19 135.7 7.1 118 206-329 1-119 (282)
60 3l2b_A Probable manganase-depe 99.5 6.5E-15 2.2E-19 133.4 7.1 119 205-327 6-242 (245)
61 3ddj_A CBS domain-containing p 99.5 4.5E-15 1.6E-19 137.8 6.1 124 203-330 153-286 (296)
62 2yzq_A Putative uncharacterize 99.5 6.7E-14 2.3E-18 128.6 10.5 122 204-329 124-279 (282)
63 2d4z_A Chloride channel protei 99.5 3.3E-14 1.1E-18 129.7 7.2 125 202-330 9-247 (250)
64 2qrd_G Protein C1556.08C; AMPK 99.5 6.9E-14 2.4E-18 131.9 8.3 126 204-333 180-319 (334)
65 2v8q_E 5'-AMP-activated protei 99.4 2E-13 6.8E-18 128.7 8.7 124 205-331 189-325 (330)
66 1vrd_A Inosine-5'-monophosphat 99.3 1.7E-13 6E-18 136.8 1.6 129 192-330 86-216 (494)
67 1jcn_A Inosine monophosphate d 99.2 6.9E-13 2.4E-17 133.1 0.4 120 207-329 109-233 (514)
68 4af0_A Inosine-5'-monophosphat 99.1 8.8E-12 3E-16 122.7 1.6 128 191-328 128-257 (556)
69 1vr9_A CBS domain protein/ACT 98.6 5.5E-09 1.9E-13 92.5 0.7 103 206-313 72-175 (213)
70 3ghd_A A cystathionine beta-sy 98.5 1.7E-07 5.8E-12 68.0 5.6 65 217-284 1-70 (70)
71 3fio_A A cystathionine beta-sy 98.5 2.2E-07 7.5E-12 66.6 5.6 63 218-283 2-69 (70)
72 3l2b_A Probable manganase-depe 98.4 1.7E-07 5.9E-12 84.2 3.8 60 204-266 183-242 (245)
73 4esy_A CBS domain containing m 98.3 5.6E-07 1.9E-11 76.2 5.7 60 270-329 17-76 (170)
74 4fry_A Putative signal-transdu 98.2 1.3E-06 4.5E-11 72.6 4.7 61 203-268 75-135 (157)
75 3fv6_A YQZB protein; CBS domai 98.1 1.8E-06 6.3E-11 72.1 4.7 62 203-266 78-142 (159)
76 3fio_A A cystathionine beta-sy 98.1 2.1E-06 7.1E-11 61.3 3.7 50 280-330 1-50 (70)
77 3kpb_A Uncharacterized protein 98.1 3.6E-06 1.2E-10 66.6 5.5 59 204-266 60-118 (122)
78 1pbj_A Hypothetical protein; s 98.1 2.1E-06 7.3E-11 68.1 3.9 60 202-266 61-120 (125)
79 3lfr_A Putative metal ION tran 98.0 3.8E-06 1.3E-10 68.3 4.9 60 203-267 67-126 (136)
80 3gby_A Uncharacterized protein 98.0 3.9E-06 1.3E-10 67.2 4.5 59 270-329 4-62 (128)
81 1pvm_A Conserved hypothetical 98.0 9.7E-06 3.3E-10 69.3 7.2 61 203-267 72-132 (184)
82 2rc3_A CBS domain; in SITU pro 98.0 5.1E-06 1.7E-10 67.1 5.2 59 203-266 71-129 (135)
83 4gqw_A CBS domain-containing p 98.0 4.1E-06 1.4E-10 68.7 3.9 61 203-267 82-142 (152)
84 3ghd_A A cystathionine beta-sy 97.9 6.5E-06 2.2E-10 59.5 4.1 49 281-330 2-50 (70)
85 1me8_A Inosine-5'-monophosphat 97.9 3.4E-06 1.2E-10 84.1 3.5 111 204-319 159-272 (503)
86 1o50_A CBS domain-containing p 97.9 5.6E-06 1.9E-10 68.9 4.3 59 203-266 93-151 (157)
87 3lhh_A CBS domain protein; str 97.9 1.6E-05 5.5E-10 67.3 7.1 67 195-266 96-162 (172)
88 2ef7_A Hypothetical protein ST 97.9 5.3E-06 1.8E-10 66.7 3.9 59 205-267 66-124 (133)
89 3jtf_A Magnesium and cobalt ef 97.9 1.2E-05 3.9E-10 64.7 5.8 58 204-266 67-124 (129)
90 3fhm_A Uncharacterized protein 97.9 9.2E-06 3.2E-10 68.2 5.4 61 202-267 89-149 (165)
91 2uv4_A 5'-AMP-activated protei 97.9 1.2E-05 4.1E-10 66.4 6.0 60 205-266 86-149 (152)
92 2yzi_A Hypothetical protein PH 97.9 1.3E-05 4.3E-10 64.9 5.9 56 271-326 7-62 (138)
93 3k2v_A Putative D-arabinose 5- 97.9 1E-05 3.5E-10 66.6 5.4 59 271-329 28-88 (149)
94 2rih_A Conserved protein with 97.9 1.9E-05 6.6E-10 64.2 7.0 57 205-266 70-126 (141)
95 3lv9_A Putative transporter; C 97.9 1.6E-05 5.5E-10 65.3 6.5 57 205-266 87-143 (148)
96 3i8n_A Uncharacterized protein 97.9 1.3E-05 4.3E-10 64.5 5.5 58 204-266 70-127 (130)
97 2nyc_A Nuclear protein SNF4; b 97.9 7.5E-06 2.6E-10 66.5 4.2 62 203-266 74-139 (144)
98 3sl7_A CBS domain-containing p 97.9 8.5E-06 2.9E-10 68.9 4.6 61 202-266 94-154 (180)
99 3oco_A Hemolysin-like protein 97.9 1.6E-05 5.5E-10 65.8 6.1 59 204-267 84-142 (153)
100 1y5h_A Hypothetical protein RV 97.9 7E-06 2.4E-10 65.9 3.8 58 204-266 72-129 (133)
101 3nqr_A Magnesium and cobalt ef 97.9 1.1E-05 3.9E-10 64.4 4.7 59 271-329 3-64 (127)
102 2p9m_A Hypothetical protein MJ 97.9 1.3E-05 4.6E-10 64.6 4.9 58 271-328 8-66 (138)
103 3oi8_A Uncharacterized protein 97.8 1.5E-05 5.1E-10 66.4 5.0 56 204-264 101-156 (156)
104 3ctu_A CBS domain protein; str 97.8 8.9E-06 3.1E-10 67.4 3.4 58 271-328 15-74 (156)
105 2o16_A Acetoin utilization pro 97.8 9.4E-06 3.2E-10 67.8 3.5 58 271-328 5-62 (160)
106 3lqn_A CBS domain protein; csg 97.8 2.7E-05 9.1E-10 63.9 6.2 59 203-267 84-142 (150)
107 3hf7_A Uncharacterized CBS-dom 97.8 1.7E-05 5.8E-10 63.9 4.8 58 204-266 68-125 (130)
108 3usb_A Inosine-5'-monophosphat 97.8 3.8E-05 1.3E-09 76.6 8.3 110 204-317 173-284 (511)
109 2emq_A Hypothetical conserved 97.8 1.8E-05 6E-10 65.5 4.4 59 271-329 11-71 (157)
110 3kxr_A Magnesium transporter, 97.7 2.5E-05 8.4E-10 68.5 5.2 60 204-267 114-173 (205)
111 3k6e_A CBS domain protein; str 97.7 1.4E-05 4.8E-10 66.9 2.9 58 203-266 83-140 (156)
112 2pfi_A Chloride channel protei 97.7 2.4E-05 8.1E-10 65.0 4.2 59 270-328 12-72 (164)
113 1yav_A Hypothetical protein BS 97.7 1.8E-05 6.1E-10 65.8 2.7 59 271-329 14-74 (159)
114 2j9l_A Chloride channel protei 97.6 4.9E-05 1.7E-09 64.5 4.8 60 203-267 105-164 (185)
115 2yvy_A MGTE, Mg2+ transporter 97.5 7.2E-05 2.5E-09 68.5 4.5 60 204-267 197-256 (278)
116 3ocm_A Putative membrane prote 97.4 8.9E-05 3.1E-09 63.0 4.0 59 270-328 35-96 (173)
117 2d4z_A Chloride channel protei 97.4 8.9E-05 3E-09 67.1 4.0 59 270-328 12-72 (250)
118 2oux_A Magnesium transporter; 97.4 9.9E-05 3.4E-09 68.0 3.9 59 204-266 199-257 (286)
119 3org_A CMCLC; transporter, tra 97.3 0.00017 5.7E-09 73.9 5.1 56 207-267 569-624 (632)
120 4avf_A Inosine-5'-monophosphat 97.3 0.00016 5.6E-09 71.7 4.9 61 204-266 145-205 (490)
121 2zy9_A Mg2+ transporter MGTE; 97.2 0.00027 9.2E-09 69.8 4.7 59 204-266 217-275 (473)
122 4fxs_A Inosine-5'-monophosphat 97.1 0.00022 7.7E-09 70.8 4.0 61 204-266 147-207 (496)
123 3pc3_A CG1753, isoform A; CBS, 97.1 0.00023 7.8E-09 71.3 3.1 58 271-328 384-443 (527)
124 1vrd_A Inosine-5'-monophosphat 97.1 0.00034 1.2E-08 69.4 4.2 61 204-266 153-213 (494)
125 1jcn_A Inosine monophosphate d 96.9 0.0008 2.7E-08 67.1 5.2 61 204-266 171-231 (514)
126 2cu0_A Inosine-5'-monophosphat 96.8 0.00077 2.6E-08 66.8 4.3 108 204-319 148-258 (486)
127 4af0_A Inosine-5'-monophosphat 96.6 0.00074 2.5E-08 66.7 2.7 113 204-321 198-313 (556)
128 1zfj_A Inosine monophosphate d 96.4 0.0025 8.7E-08 63.0 5.3 61 204-267 150-210 (491)
129 1tif_A IF3-N, translation init 32.2 18 0.00063 26.0 1.5 24 303-326 14-37 (78)
130 2jaf_A Halorhodopsin, HR; chro 30.6 2.8E+02 0.0097 24.5 11.7 39 111-151 178-216 (274)
131 2k8y_A Uncharacterized protein 24.1 31 0.0011 28.0 1.7 65 281-351 63-127 (150)
132 3arc_L Photosystem II reaction 23.0 88 0.003 18.7 3.0 23 9-31 13-35 (37)
No 1
>3oi8_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: ADN; 1.99A {Neisseria meningitidis serogroup B}
Probab=99.95 E-value=1.7e-28 Score=208.45 Aligned_cols=154 Identities=19% Similarity=0.334 Sum_probs=141.5
Q ss_pred cccHHHHHHHHHhcccccccCCCCCHHHHHHHHhhhcccccccccccccCcceEEEeCCCCccHHHHHHHHhcCCcEEee
Q 018729 166 LLRRAELKTFVNFHGNEAGKGGDLTHDETTIIAGALELTEKTAKDAMTPISKAFSLDLDATLTLDTLNAIMTMGHSRVPV 245 (351)
Q Consensus 166 ~~t~eEl~~lv~~~~~e~~~~g~l~~~e~~~i~~vl~l~~~~v~~iMtpr~~v~~v~~~~t~~~e~~~~~~~~~~sr~PV 245 (351)
.+|+|||+.+++ +++++|.++++|++++++++++++.+|+++|+|+.+++++++++++. ++++.+.+++++++||
T Consensus 2 ~~t~~el~~li~----~~~~~g~l~~~e~~~i~~~~~l~~~~v~diM~~~~~~~~v~~~~~i~-~a~~~m~~~~~~~~pV 76 (156)
T 3oi8_A 2 NASAEDVLNLLR----QAHEQEVFDADTLLRLEKVLDFSDLEVRDAMITRSRMNVLKENDSIE-RITAYVIDTAHSRFPV 76 (156)
T ss_dssp CCCHHHHHHHHH----HHHHTTSSCHHHHHHHHHHHHHTTCBGGGTCEEGGGCCCEETTCCHH-HHHHHHHHHCCSEEEE
T ss_pred CCCHHHHHHHHH----hHHhcCCcCHHHHHHHHHHhccCCCCHhheeeeHHHeEEECCCCCHH-HHHHHHHHCCCCEEEE
Confidence 378999999998 46678999999999999999999999999999999999999999998 9999999999999999
Q ss_pred EcCCCCceeEEeEhhhhcccccc-ccccccccccccCceeCCCCCHHHHHHHHhhCCceEEEEEecCCCcccccchhhhh
Q 018729 246 YSGNPTNIIGLILVKNLLSVDYR-DAVPLRKMIIRRIPRVSEDMPLYDILNEFQKGHSHIAVVYKDLNEKKEGELFKDNC 324 (351)
Q Consensus 246 ~~~~~d~ivGiv~~kdll~~~~~-~~~~l~~i~~~~~~~V~~~~~l~~lL~~~~~~~~~~aiVvDe~g~~~GiVT~~Dil 324 (351)
++++.++++|+++.+|++....+ .+.++.++ +++++++++++++.++++.|++++.+.++|+|++|+++|+||..|++
T Consensus 77 vd~~~~~lvGivt~~dl~~~~~~~~~~~v~~i-m~~~~~v~~~~~l~~a~~~m~~~~~~~~~Vvd~~g~~~Givt~~Dil 155 (156)
T 3oi8_A 77 IGEDKDEVLGILHAKDLLKYMFNPEQFHLKSI-LRPAVFVPEGKSLTALLKEFREQRNHMAIVIDEYGGTSGLVTFEDII 155 (156)
T ss_dssp ESSSTTCEEEEEEGGGGGGGSSCGGGCCHHHH-CBCCCEEETTSBHHHHHHHHHHTTCCEEEEECTTSSEEEEEEHHHHC
T ss_pred EcCCCCcEEEEEEHHHHHHHHHcCCcccHHHH-cCCCEEECCCCCHHHHHHHHHhcCCeEEEEECCCCCEEEEEEHHHhc
Confidence 98765699999999999886543 35678898 57899999999999999999999999999999999999999999987
Q ss_pred c
Q 018729 325 K 325 (351)
Q Consensus 325 ~ 325 (351)
+
T Consensus 156 e 156 (156)
T 3oi8_A 156 E 156 (156)
T ss_dssp C
T ss_pred C
Confidence 4
No 2
>3lhh_A CBS domain protein; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG, cell membrane; HET: MSE AMP; 2.10A {Shewanella oneidensis}
Probab=99.95 E-value=7.7e-29 Score=214.03 Aligned_cols=165 Identities=22% Similarity=0.375 Sum_probs=115.1
Q ss_pred ccccHHHHHHHHHhcccccccCCCCCHHHHHHHHhhhcccccccccccccCcceEEEeCCCCccHHHHHHHHhcCCcEEe
Q 018729 165 VLLRRAELKTFVNFHGNEAGKGGDLTHDETTIIAGALELTEKTAKDAMTPISKAFSLDLDATLTLDTLNAIMTMGHSRVP 244 (351)
Q Consensus 165 ~~~t~eEl~~lv~~~~~e~~~~g~l~~~e~~~i~~vl~l~~~~v~~iMtpr~~v~~v~~~~t~~~e~~~~~~~~~~sr~P 244 (351)
+.+|++||+.+++ ++.++|.++++|++++++++++.+.+|+++|+|+.+++++++++++. ++++.+.+++++++|
T Consensus 5 ~~~t~~el~~l~~----~~~~~g~l~~~e~~~i~~~~~l~~~~v~diM~~~~~~~~v~~~~~v~-~a~~~m~~~~~~~~p 79 (172)
T 3lhh_A 5 DNVTQEDIQAMLQ----EGSSAGVIEHNEHAMVKNVFRLDERTISSLMVPRSDIVFLDLNLPLD-ANLRTVMQSPHSRFP 79 (172)
T ss_dssp ------------------------------------------CTTTTSEEGGGCCCEETTSCHH-HHHHHHHTCCCSEEE
T ss_pred ccCCHHHHHHHHH----HHHHcCCCCHHHHHHHHHHhccCCCCHHHhCccHHHeEEEcCCCCHH-HHHHHHHhCCCCEEE
Confidence 4689999999998 46778999999999999999999999999999999999999999998 999999999999999
Q ss_pred eEcCCCCceeEEeEhhhhccccccc-cccccccccccCceeCCCCCHHHHHHHHhhCCceEEEEEecCCCcccccchhhh
Q 018729 245 VYSGNPTNIIGLILVKNLLSVDYRD-AVPLRKMIIRRIPRVSEDMPLYDILNEFQKGHSHIAVVYKDLNEKKEGELFKDN 323 (351)
Q Consensus 245 V~~~~~d~ivGiv~~kdll~~~~~~-~~~l~~i~~~~~~~V~~~~~l~~lL~~~~~~~~~~aiVvDe~g~~~GiVT~~Di 323 (351)
|++++.++++|+++.+|++....++ +.++.++| ++++++++++++.++++.|++++.+.++|+|++|+++|+||..|+
T Consensus 80 Vvd~~~~~lvGivt~~dl~~~~~~~~~~~v~~im-~~~~~v~~~~~l~~a~~~m~~~~~~~~pVvd~~g~lvGiit~~Di 158 (172)
T 3lhh_A 80 VCRNNVDDMVGIISAKQLLSESIAGERLELVDLV-KNCNFVPNSLSGMELLEHFRTTGSQMVFVVDEYGDLKGLVTLQDM 158 (172)
T ss_dssp EESSSTTSEEEEEEHHHHHHHHHTTCCCCGGGGC-BCCEEEETTCCHHHHHHHHHHHTCSEEEEECTTSCEEEEEEHHHH
T ss_pred EEeCCCCeEEEEEEHHHHHHHHhhcCcccHHHHh-cCCeEeCCCCCHHHHHHHHHHcCCeEEEEEeCCCCEEEEeeHHHH
Confidence 9987557999999999998765432 56899986 999999999999999999999999999999999999999999999
Q ss_pred hccccCCCCCCC
Q 018729 324 CKKPRGQPEKSS 335 (351)
Q Consensus 324 l~~l~~~~~~~~ 335 (351)
++.+.++...+.
T Consensus 159 l~~l~~~~~de~ 170 (172)
T 3lhh_A 159 MDALTGEFFQED 170 (172)
T ss_dssp HHHHHTTCC---
T ss_pred HHHHhCCCcccc
Confidence 999999876543
No 3
>3ocm_A Putative membrane protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: ADP; 1.80A {Bordetella parapertussis}
Probab=99.93 E-value=2e-26 Score=199.50 Aligned_cols=152 Identities=16% Similarity=0.233 Sum_probs=134.5
Q ss_pred cccCCCCCHHHHHHHHhhhcccccccccccccCcceEEEeCCCCccHHHHHHHHhcCCcEEeeEcCCCCceeEEeEhhhh
Q 018729 183 AGKGGDLTHDETTIIAGALELTEKTAKDAMTPISKAFSLDLDATLTLDTLNAIMTMGHSRVPVYSGNPTNIIGLILVKNL 262 (351)
Q Consensus 183 ~~~~g~l~~~e~~~i~~vl~l~~~~v~~iMtpr~~v~~v~~~~t~~~e~~~~~~~~~~sr~PV~~~~~d~ivGiv~~kdl 262 (351)
++++|.++++|+++++++++|.+.+|+++|+|+.+++++++++++. ++++.+.+++++++||++++.++++|+|+.+|+
T Consensus 13 ~~~~g~l~~~e~~~i~~~l~l~~~~v~diM~~~~~v~~v~~~~tv~-ea~~~m~~~~~~~~pVvd~~~~~lvGivt~~Dl 91 (173)
T 3ocm_A 13 MPAVPAFGVEERNMVSGVLTLAERSIRSIMTPRTDVSWVNIDDDAA-TIRQQLTAAPHSFFPVCRGSLDEVVGIGRAKDL 91 (173)
T ss_dssp -----CCCHHHHHHHHHHHHHTTSCSTTTSEEGGGCCCEETTSCHH-HHHHHHHHSSCSEEEEESSSTTSEEEEEEHHHH
T ss_pred HHhcCCcCHHHHHHHHHHhccCCCCHHHhCCcHHHeEEEeCCCCHH-HHHHHHHhCCCCEEEEEeCCCCCEEEEEEHHHH
Confidence 4567999999999999999999999999999999999999999998 999999999999999998765799999999999
Q ss_pred cccccc-ccccccccccccCceeCCCCCHHHHHHHHhhCCceEEEEEecCCCcccccchhhhhccccCCCCCCCCc
Q 018729 263 LSVDYR-DAVPLRKMIIRRIPRVSEDMPLYDILNEFQKGHSHIAVVYKDLNEKKEGELFKDNCKKPRGQPEKSSQK 337 (351)
Q Consensus 263 l~~~~~-~~~~l~~i~~~~~~~V~~~~~l~~lL~~~~~~~~~~aiVvDe~g~~~GiVT~~Dil~~l~~~~~~~~~~ 337 (351)
+....+ .+.++. +++++++|++++++.++++.|++++.+.++|+|++|+++|+||..|+++.+.++...+...
T Consensus 92 ~~~~~~~~~~~v~--~~~~~~~v~~~~~l~~al~~m~~~~~~~~~Vvde~g~lvGiIT~~Dil~~l~~~i~de~~~ 165 (173)
T 3ocm_A 92 VADLITEGRVRRN--RLRDPIIVHESIGILRLMDTLKRSRGQLVLVADEFGAIEGLVTPIDVFEAIAGEFPDEDEL 165 (173)
T ss_dssp HHHHHHHSSCCGG--GSBCCCEECGGGCHHHHHHHHHHSTTCCEEEECTTCCEEEEECHHHHHHHHHCCCCCTTSC
T ss_pred HHHHhcCCcchhH--hcCCCeEECCCCcHHHHHHHHHHcCCeEEEEEeCCCCEEEEEeHHHHHHHHhCcCCCcccc
Confidence 876432 345676 4799999999999999999999999999999999999999999999999999987765543
No 4
>3lv9_A Putative transporter; CBS domain, PSI, MCSG, structural genomics, protein structur initiative, midwest center for structural genomics; 2.40A {Clostridium difficile 630}
Probab=99.93 E-value=1.6e-26 Score=194.02 Aligned_cols=145 Identities=19% Similarity=0.350 Sum_probs=119.5
Q ss_pred cCCCCCHHHHHHHHhhhcccccccccccccCcceEEEeCCCCccHHHHHHHHhcCCcEEeeEcCCCCceeEEeEhhhhcc
Q 018729 185 KGGDLTHDETTIIAGALELTEKTAKDAMTPISKAFSLDLDATLTLDTLNAIMTMGHSRVPVYSGNPTNIIGLILVKNLLS 264 (351)
Q Consensus 185 ~~g~l~~~e~~~i~~vl~l~~~~v~~iMtpr~~v~~v~~~~t~~~e~~~~~~~~~~sr~PV~~~~~d~ivGiv~~kdll~ 264 (351)
++|.++++|++++++++++.+.+|+++|+|+.+++++++++++. ++++.+.+++++++||++++.++++|+++.+|++.
T Consensus 2 ~~g~l~~~e~~~i~~~~~l~~~~v~diM~~~~~~~~v~~~~~~~-~a~~~m~~~~~~~~pVvd~~~~~lvGivt~~dl~~ 80 (148)
T 3lv9_A 2 NAGLIDESEQRLVDNIFEFEEKKIREIMVPRTDMVCIYESDSEE-KILAILKEEGVTRYPVCRKNKDDILGFVHIRDLYN 80 (148)
T ss_dssp ----------------CGGGTCBGGGTSEETTTCCCEETTCCHH-HHHHHHHHSCCSEEEEESSSTTSEEEEEEHHHHHH
T ss_pred CCCccCHHHHHHHHHHhccCCCCHHHccccHHHeEEECCCCCHH-HHHHHHHHCCCCEEEEEcCCCCcEEEEEEHHHHHH
Confidence 46899999999999999999999999999999999999999998 99999999999999999875579999999999987
Q ss_pred ccccc-cccccccccccCceeCCCCCHHHHHHHHhhCCceEEEEEecCCCcccccchhhhhccccCCC
Q 018729 265 VDYRD-AVPLRKMIIRRIPRVSEDMPLYDILNEFQKGHSHIAVVYKDLNEKKEGELFKDNCKKPRGQP 331 (351)
Q Consensus 265 ~~~~~-~~~l~~i~~~~~~~V~~~~~l~~lL~~~~~~~~~~aiVvDe~g~~~GiVT~~Dil~~l~~~~ 331 (351)
...++ +.++.++| ++++++++++++.++++.|++++.+.++|+|++|+++|+||..|+++.+.|+.
T Consensus 81 ~~~~~~~~~v~~~m-~~~~~v~~~~~l~~~~~~m~~~~~~~l~Vvd~~g~~~Giit~~dil~~l~~~i 147 (148)
T 3lv9_A 81 QKINENKIELEEIL-RDIIYISENLTIDKALERIRKEKLQLAIVVDEYGGTSGVVTIEDILEEIVGEI 147 (148)
T ss_dssp HHHHHSCCCGGGTC-BCCEEEETTSBHHHHHHHHHHHTCSEEEEECTTSSEEEEEEHHHHHHHHHHTC
T ss_pred HHhcCCCccHHHhc-CCCeEECCCCCHHHHHHHHHhcCCeEEEEEeCCCCEEEEEEHHHHHHHHhCcC
Confidence 64333 56899986 99999999999999999999999999999999999999999999999998764
No 5
>3oco_A Hemolysin-like protein containing CBS domains; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; 2.20A {Oenococcus oeni}
Probab=99.90 E-value=6.7e-25 Score=185.32 Aligned_cols=145 Identities=21% Similarity=0.307 Sum_probs=124.6
Q ss_pred CCHHHHHHHHhhhcccccccccccccCcceEEEeCCCCccHHHHHHHHhcCCcEEeeE-cCCCCceeEEeEhhhhccccc
Q 018729 189 LTHDETTIIAGALELTEKTAKDAMTPISKAFSLDLDATLTLDTLNAIMTMGHSRVPVY-SGNPTNIIGLILVKNLLSVDY 267 (351)
Q Consensus 189 l~~~e~~~i~~vl~l~~~~v~~iMtpr~~v~~v~~~~t~~~e~~~~~~~~~~sr~PV~-~~~~d~ivGiv~~kdll~~~~ 267 (351)
++++|++++++++++++.+|+++|+|+.+++++++++++. ++++.+.+++++++||+ +++.++++|+++.+|++....
T Consensus 3 l~~~e~~~i~~~~~l~~~~v~~iM~~~~~~~~v~~~~~~~-~a~~~m~~~~~~~~pVv~d~~~~~lvGivt~~dl~~~~~ 81 (153)
T 3oco_A 3 ADEEDANFMQRAFEMNDKVASDVMVDRTSMSVVDVDETIA-DALLLYLEEQYSRFPVTADNDKDKIIGYAYNYDIVRQAR 81 (153)
T ss_dssp -----CCHHHHHHHHHHCBHHHHSEEGGGCCCEETTSBHH-HHHHHHHHHCCSEEEEEETTEEEEEEEEEEHHHHHHHHH
T ss_pred cCHHHHHHHHHhcccCCCEeeeEecchhheEEEcCCCCHH-HHHHHHHhCCCCEEEEEECCCCCcEEEEEEHHHHHhHHh
Confidence 6778899999999999999999999998999999999998 99999999999999999 654579999999999987643
Q ss_pred c-ccccccccccccCceeCCCCCHHHHHHHHhhCCceEEEEEecCCCcccccchhhhhccccCCCCCCC
Q 018729 268 R-DAVPLRKMIIRRIPRVSEDMPLYDILNEFQKGHSHIAVVYKDLNEKKEGELFKDNCKKPRGQPEKSS 335 (351)
Q Consensus 268 ~-~~~~l~~i~~~~~~~V~~~~~l~~lL~~~~~~~~~~aiVvDe~g~~~GiVT~~Dil~~l~~~~~~~~ 335 (351)
. ...++.++| ++++++++++++.++++.|++++.+.++|+|++|+++|+||..|+++.+.++...+.
T Consensus 82 ~~~~~~v~~~m-~~~~~v~~~~~l~~~~~~m~~~~~~~lpVvd~~g~~vGivt~~dil~~l~~~~~de~ 149 (153)
T 3oco_A 82 IDDKAKISTIM-RDIVSVPENMKVPDVMEEMSAHRVPMAIVIDEYGGTSGIITDKDVYEELFGNLRDEQ 149 (153)
T ss_dssp HHTTSBGGGTC-BCCEEEETTSBHHHHHHHHHHTTCSCEEEECTTSCEEEEECHHHHHHHHHC------
T ss_pred cCCCCcHHHHh-CCCeEECCCCCHHHHHHHHHHcCCcEEEEEeCCCCEEEEeeHHHHHHHHhccCCCcc
Confidence 2 256899986 999999999999999999999999999999999999999999999999999776543
No 6
>3jtf_A Magnesium and cobalt efflux protein; CBS domain, CORC, AMP, structural genomics, PSI-2, protein S initiative; HET: MSE AMP; 2.00A {Bordetella parapertussis}
Probab=99.89 E-value=2.1e-23 Score=171.11 Aligned_cols=127 Identities=30% Similarity=0.435 Sum_probs=114.6
Q ss_pred ccccccccccccCcceEEEeCCCCccHHHHHHHHhcCCcEEeeEcCCCCceeEEeEhhhhccccccccccccccccccCc
Q 018729 203 LTEKTAKDAMTPISKAFSLDLDATLTLDTLNAIMTMGHSRVPVYSGNPTNIIGLILVKNLLSVDYRDAVPLRKMIIRRIP 282 (351)
Q Consensus 203 l~~~~v~~iMtpr~~v~~v~~~~t~~~e~~~~~~~~~~sr~PV~~~~~d~ivGiv~~kdll~~~~~~~~~l~~i~~~~~~ 282 (351)
..+.+|+++|+|+.+++++++++++. ++++.+.+++++++||++++.++++|+++.+|++....+++.++.++ +++++
T Consensus 2 ~~~~~v~diM~~~~~~~~v~~~~~~~-~a~~~m~~~~~~~~pVvd~~~~~~~Givt~~dl~~~~~~~~~~v~~~-m~~~~ 79 (129)
T 3jtf_A 2 NAERTVADIMVPRSRMDLLDISQPLP-QLLATIIETAHSRFPVYEDDRDNIIGILLAKDLLRYMLEPALDIRSL-VRPAV 79 (129)
T ss_dssp --CCBHHHHCEEGGGCCCEETTSCHH-HHHHHHHHSCCSEEEEESSSTTCEEEEEEGGGGGGGGTCTTSCGGGG-CBCCC
T ss_pred CCCCCHHHhCccHHHeEEECCCCCHH-HHHHHHHHcCCCEEEEEcCCCCcEEEEEEHHHHHhHhccCCcCHHHH-hCCCe
Confidence 46789999999999999999999998 99999999999999999875579999999999988755556688898 57899
Q ss_pred eeCCCCCHHHHHHHHhhCCceEEEEEecCCCcccccchhhhhccccCCC
Q 018729 283 RVSEDMPLYDILNEFQKGHSHIAVVYKDLNEKKEGELFKDNCKKPRGQP 331 (351)
Q Consensus 283 ~V~~~~~l~~lL~~~~~~~~~~aiVvDe~g~~~GiVT~~Dil~~l~~~~ 331 (351)
++++++++.++++.|++++.+.++|+|++|+++|+||..|+++.+.|+.
T Consensus 80 ~v~~~~~l~~~~~~m~~~~~~~~pVvd~~g~~~Giit~~Dil~~l~gei 128 (129)
T 3jtf_A 80 FIPEVKRLNVLLREFRASRNHLAIVIDEHGGISGLVTMEDVLEQIVGDI 128 (129)
T ss_dssp EEETTCBHHHHHHHHHTSSCCEEEEECC-CCEEEEEEHHHHHHHHHHTC
T ss_pred EeCCCCcHHHHHHHHHhcCCeEEEEEeCCCCEEEEEEHHHHHHHHhCCC
Confidence 9999999999999999999999999999999999999999999998865
No 7
>3lfr_A Putative metal ION transporter; CBS, AMP, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: AMP; 1.53A {Pseudomonas syringae}
Probab=99.88 E-value=9.4e-23 Score=168.80 Aligned_cols=129 Identities=26% Similarity=0.412 Sum_probs=110.5
Q ss_pred cccccccccccCcceEEEeCCCCccHHHHHHHHhcCCcEEeeEcCCCCceeEEeEhhhhccccc---ccccccccccccc
Q 018729 204 TEKTAKDAMTPISKAFSLDLDATLTLDTLNAIMTMGHSRVPVYSGNPTNIIGLILVKNLLSVDY---RDAVPLRKMIIRR 280 (351)
Q Consensus 204 ~~~~v~~iMtpr~~v~~v~~~~t~~~e~~~~~~~~~~sr~PV~~~~~d~ivGiv~~kdll~~~~---~~~~~l~~i~~~~ 280 (351)
++.+|+++|+|+.+++++++++++. ++++.+.+++++++||++++.++++|+++.+|++.... ..+.++.++ +++
T Consensus 1 ~~~~v~~iM~~~~~~~~v~~~~~v~-~a~~~m~~~~~~~~pVvd~~~~~~vGivt~~dl~~~~~~~~~~~~~v~~~-m~~ 78 (136)
T 3lfr_A 1 ADLQVRDIMVPRSQMISIKATQTPR-EFLPAVIDAAHSRYPVIGESHDDVLGVLLAKDLLPLILKADGDSDDVKKL-LRP 78 (136)
T ss_dssp --CBHHHHSEEGGGCCCEETTCCHH-HHHHHHHHHCCSEEEEESSSTTCEEEEEEGGGGGGGGGSSSGGGCCGGGT-CBC
T ss_pred CCCChHhccccHHHEEEEcCCCCHH-HHHHHHHhCCCCEEEEEcCCCCcEEEEEEHHHHHHHHHhccCCCcCHHHH-cCC
Confidence 3678999999999999999999998 99999999999999999875579999999999997643 234678898 577
Q ss_pred CceeCCCCCHHHHHHHHhhCCceEEEEEecCCCcccccchhhhhccccCCCCCC
Q 018729 281 IPRVSEDMPLYDILNEFQKGHSHIAVVYKDLNEKKEGELFKDNCKKPRGQPEKS 334 (351)
Q Consensus 281 ~~~V~~~~~l~~lL~~~~~~~~~~aiVvDe~g~~~GiVT~~Dil~~l~~~~~~~ 334 (351)
++++++++++.++++.|++++.+.++|+|++|+++|+||..|+++.+.++..++
T Consensus 79 ~~~v~~~~~l~~~~~~m~~~~~~~~~Vvd~~g~lvGiit~~Dil~~l~~~~~de 132 (136)
T 3lfr_A 79 ATFVPESKRLNVLLREFRANHNHMAIVIDEYGGVAGLVTIEDVLEQIVGDIEDE 132 (136)
T ss_dssp CCEEETTCBHHHHHHHHHHHTCCEEEEECTTSCEEEEEEHHHHHTTC-------
T ss_pred CeEECCCCcHHHHHHHHHhcCCeEEEEEeCCCCEEEEEEHHHHHHHHhCCCcCc
Confidence 999999999999999999999999999999999999999999999999876654
No 8
>3hf7_A Uncharacterized CBS-domain protein; CSB-domain PAIR, AMP, PSI, MCSG, STR genomics, midwest center for structural genomics; HET: AMP; 2.75A {Klebsiella pneumoniae subsp}
Probab=99.87 E-value=3.8e-23 Score=169.92 Aligned_cols=125 Identities=16% Similarity=0.261 Sum_probs=111.6
Q ss_pred ccccccccccCcceEEEeCCCCccHHHHHHHHhcCCcEEeeEcCCCCceeEEeEhhhhccccccc----ccccccccccc
Q 018729 205 EKTAKDAMTPISKAFSLDLDATLTLDTLNAIMTMGHSRVPVYSGNPTNIIGLILVKNLLSVDYRD----AVPLRKMIIRR 280 (351)
Q Consensus 205 ~~~v~~iMtpr~~v~~v~~~~t~~~e~~~~~~~~~~sr~PV~~~~~d~ivGiv~~kdll~~~~~~----~~~l~~i~~~~ 280 (351)
+.+|+++|+|+.+++++++++++. ++++.+.+++++++||++++.++++|+++.+|++....++ ..++.++ +++
T Consensus 1 ~~~v~~iM~~~~~~~~v~~~~~v~-~a~~~m~~~~~~~~pVv~~~~~~lvGivt~~dl~~~~~~~~~~~~~~v~~~-m~~ 78 (130)
T 3hf7_A 1 KVSVNDIMVPRNEIVGIDINDDWK-SIVRQLTHSPHGRIVLYRDSLDDAISMLRVREAYRLMTEKKEFTKEIMLRA-ADE 78 (130)
T ss_dssp CCBHHHHSEEGGGCCEEETTSCHH-HHHHHHHTCSSSEEEEESSSGGGEEEEEEHHHHHHHHTSSSCCCHHHHHHH-SBC
T ss_pred CcCHHHhCccHHHEEEEcCCCCHH-HHHHHHHHCCCCeEEEEcCCCCcEEEEEEHHHHHHHHhccCccchhhHHHh-ccC
Confidence 368999999999999999999998 9999999999999999976558999999999998765432 2457787 489
Q ss_pred CceeCCCCCHHHHHHHHhhCCceEEEEEecCCCcccccchhhhhccccCCC
Q 018729 281 IPRVSEDMPLYDILNEFQKGHSHIAVVYKDLNEKKEGELFKDNCKKPRGQP 331 (351)
Q Consensus 281 ~~~V~~~~~l~~lL~~~~~~~~~~aiVvDe~g~~~GiVT~~Dil~~l~~~~ 331 (351)
++++++++++.++++.|++++.+.++|+||+|+++|+||..|+++.+.|+.
T Consensus 79 ~~~v~~~~~l~~~~~~m~~~~~~~~~Vvd~~g~lvGiit~~Dil~~l~g~i 129 (130)
T 3hf7_A 79 IYFVPEGTPLSTQLVKFQRNKKKVGLVVDEYGDIQGLVTVEDILEEIVGDF 129 (130)
T ss_dssp CCEEETTCBHHHHHHHHHHHCCCEEEEECTTSCEEEEEEHHHHHHHHHC--
T ss_pred CeEeCCCCcHHHHHHHHHhcCCeEEEEEcCCCCEEEEeeHHHHHHHHhCCC
Confidence 999999999999999999999999999999999999999999999998864
No 9
>3k6e_A CBS domain protein; streptococcus pneumoniae TIGR4, structural genomics, PSI-2, protein structure initiative; 2.81A {Streptococcus pneumoniae}
Probab=99.87 E-value=5.7e-23 Score=174.75 Aligned_cols=139 Identities=16% Similarity=0.146 Sum_probs=115.1
Q ss_pred HHHhhhc-ccccccccccccCcceEEEeCCCCccHHHHHHHHhcCCcEEeeEcCCCCceeEEeEhhhhcccccc------
Q 018729 196 IIAGALE-LTEKTAKDAMTPISKAFSLDLDATLTLDTLNAIMTMGHSRVPVYSGNPTNIIGLILVKNLLSVDYR------ 268 (351)
Q Consensus 196 ~i~~vl~-l~~~~v~~iMtpr~~v~~v~~~~t~~~e~~~~~~~~~~sr~PV~~~~~d~ivGiv~~kdll~~~~~------ 268 (351)
|+.+.|+ |-..+++++|+|+.+++++++++|++ ++++.+.+++++++||++++ ++++|+++.+|++.....
T Consensus 4 mi~~~~e~~l~~~~~~iM~P~~~v~~v~~~~t~~-~a~~~m~~~~~s~~pVvd~~-~~lvGiit~~Di~~~~~~~~~~~~ 81 (156)
T 3k6e_A 4 MIAKEFETFLLGQEETFLTPAKNLAVLIDTHNAD-HATLLLSQMTYTRVPVVTDE-KQFVGTIGLRDIMAYQMEHDLSQE 81 (156)
T ss_dssp HHHHHHHHHHHTTGGGGEEETTSSCCEETTSBHH-HHHHHHTTSSSSEEEEECC--CBEEEEEEHHHHHHHHHHHTCCHH
T ss_pred hHHHHHHHHhhccHHHhCcchhHeEEECCcCCHH-HHHHHHHHcCCcEEEEEcCC-CcEEEEEEecchhhhhhhcccccc
Confidence 5555553 55678999999999999999999998 99999999999999999865 899999999999765321
Q ss_pred --ccccccccccccCceeCCCCCHHHHHHHHhhCCceEEEEEecCCCcccccchhhhhccccCCCCCCCCcc
Q 018729 269 --DAVPLRKMIIRRIPRVSEDMPLYDILNEFQKGHSHIAVVYKDLNEKKEGELFKDNCKKPRGQPEKSSQKG 338 (351)
Q Consensus 269 --~~~~l~~i~~~~~~~V~~~~~l~~lL~~~~~~~~~~aiVvDe~g~~~GiVT~~Dil~~l~~~~~~~~~~~ 338 (351)
.+.++.++|.++++++++++++.++++.|++++ +++|||++|+++|+||..|+++++.+...+..+++
T Consensus 82 ~~~~~~v~~im~~~~~~v~~~~~l~~~~~~m~~~~--~lpVVd~~g~l~GiiT~~Dil~~~~~~~~~~~~e~ 151 (156)
T 3k6e_A 82 IMADTDIVHMTKTDVAVVSPDFTITEVLHKLVDES--FLPVVDAEGIFQGIITRKSILKAVNALLHDFSKEY 151 (156)
T ss_dssp HHTTSBGGGTCBCSCCCBCTTCCHHHHHHHTTTSS--EEEEECTTSBEEEEEEHHHHHHHHHHHSCC-----
T ss_pred cccccCHHHhhcCCceecccccHHHHHHHHHHHcC--CeEEEecCCEEEEEEEHHHHHHHHHHHhcccchhh
Confidence 245788888889999999999999999998764 58999999999999999999999876555444433
No 10
>3kxr_A Magnesium transporter, putative; cystathionine beta-synthase, Mg2+ transporter, structural GE PSI-2, protein structure initiative; 2.41A {Shewanella oneidensis mr-1}
Probab=99.87 E-value=5.1e-22 Score=176.47 Aligned_cols=148 Identities=9% Similarity=0.083 Sum_probs=130.4
Q ss_pred ccHHHHHHHHHhcccccccCCCCCHHHHHHHHhhhcccccccccccccCcceEEEeCCCCccHHHHHHHHhc---CCcEE
Q 018729 167 LRRAELKTFVNFHGNEAGKGGDLTHDETTIIAGALELTEKTAKDAMTPISKAFSLDLDATLTLDTLNAIMTM---GHSRV 243 (351)
Q Consensus 167 ~t~eEl~~lv~~~~~e~~~~g~l~~~e~~~i~~vl~l~~~~v~~iMtpr~~v~~v~~~~t~~~e~~~~~~~~---~~sr~ 243 (351)
+.+++.+.++. .++++|+++++++++|.+.+|+++|+| +++++++++|+. ++++.+.++ +++.+
T Consensus 25 l~~~~~~~~l~----------~l~~~e~~~i~~~l~~~~~~v~~iM~~--~~~~v~~~~tv~-eal~~~~~~~~~~~~~~ 91 (205)
T 3kxr_A 25 LPESFTDRALA----------QMGERQRQRFELYDQYSENEIGRYTDH--QMLVLSDKATVA-QAQRFFRRIELDCNDNL 91 (205)
T ss_dssp SCHHHHHHHHH----------HSCHHHHHHHHHHHHSCTTCGGGGCBC--CCCEEETTCBHH-HHHHHHHHCCCTTCCEE
T ss_pred CCHHHHHHHHH----------cCCHHHHHHHHHHhCCCcchHHhhccC--ceEEECCCCcHH-HHHHHHHhhCccCeeEE
Confidence 34555555554 378999999999999999999999987 779999999998 999999987 78999
Q ss_pred eeEcCCCCceeEEeEhhhhccccccccccccccccccCceeCCCCCHHHHHHHHhhCCceEEEEEecCCCcccccchhhh
Q 018729 244 PVYSGNPTNIIGLILVKNLLSVDYRDAVPLRKMIIRRIPRVSEDMPLYDILNEFQKGHSHIAVVYKDLNEKKEGELFKDN 323 (351)
Q Consensus 244 PV~~~~~d~ivGiv~~kdll~~~~~~~~~l~~i~~~~~~~V~~~~~l~~lL~~~~~~~~~~aiVvDe~g~~~GiVT~~Di 323 (351)
||++++ ++++|+|+.+|++... .+.++.++|.+++++|++++++.++++.|++++.+.++|||++|+++|+||..|+
T Consensus 92 ~Vvd~~-~~lvGivt~~dll~~~--~~~~v~~im~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVVD~~g~lvGiIT~~Di 168 (205)
T 3kxr_A 92 FIVDEA-DKYLGTVRRYDIFKHE--PHEPLISLLSEDSRALTANTTLLDAAEAIEHSREIELPVIDDAGELIGRVTLRAA 168 (205)
T ss_dssp EEECTT-CBEEEEEEHHHHTTSC--TTSBGGGGCCSSCCCEETTSCHHHHHHHHHTSSCSEEEEECTTSBEEEEEEHHHH
T ss_pred EEEcCC-CeEEEEEEHHHHHhCC--CcchHHHHhcCCCeEECCCCCHHHHHHHHHhcCCCEEEEEcCCCeEEEEEEHHHH
Confidence 999875 8999999999998753 3457899977889999999999999999999999999999999999999999999
Q ss_pred hccccCC
Q 018729 324 CKKPRGQ 330 (351)
Q Consensus 324 l~~l~~~ 330 (351)
++.+..+
T Consensus 169 l~~i~~e 175 (205)
T 3kxr_A 169 TALVREH 175 (205)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 9876544
No 11
>3i8n_A Uncharacterized protein VP2912; APC64273.1, vibrio parahaemolyticus RIMD 2210633, structural genomics, PSI-2; 2.15A {Vibrio parahaemolyticus}
Probab=99.86 E-value=9.8e-23 Score=167.15 Aligned_cols=127 Identities=20% Similarity=0.278 Sum_probs=111.5
Q ss_pred cccccccccccccCcceEEEeCCCCccHHHHHHHHhcCCcEEeeEcCCCCceeEEeEhhhhcccccc--ccccccccccc
Q 018729 202 ELTEKTAKDAMTPISKAFSLDLDATLTLDTLNAIMTMGHSRVPVYSGNPTNIIGLILVKNLLSVDYR--DAVPLRKMIIR 279 (351)
Q Consensus 202 ~l~~~~v~~iMtpr~~v~~v~~~~t~~~e~~~~~~~~~~sr~PV~~~~~d~ivGiv~~kdll~~~~~--~~~~l~~i~~~ 279 (351)
+|++.+|+++|+|+.+++++++++++. ++++.+.+++++++||++++.++++|+++.+|++....+ .+.++.++| +
T Consensus 2 ~l~~~~v~~iM~~~~~v~~v~~~~~~~-~a~~~m~~~~~~~~pVvd~~~~~~~Givt~~dl~~~~~~~~~~~~v~~~m-~ 79 (130)
T 3i8n_A 2 NAQDVPVTQVMTPRPVVFRVDATMTIN-EFLDKHKDTPFSRPLVYSEQKDNIIGFVHRLELFKMQQSGSGQKQLGAVM-R 79 (130)
T ss_dssp -----CCTTTSCCBCCCCEEETTSBHH-HHHHHTTTCSCSCCEEESSSTTCEEEECCHHHHHHHHHTTTTTSBHHHHS-E
T ss_pred CcCcCCHhhCCCcHHHEEEEcCCCCHH-HHHHHHHhCCCCEEEEEeCCCCcEEEEEEHHHHHHHHhcCCCcCCHHHHh-c
Confidence 477899999999999999999999998 999999999999999998755899999999999876433 246788884 8
Q ss_pred cCceeCCCCCHHHHHHHHhhCCceEEEEEecCCCcccccchhhhhccccCC
Q 018729 280 RIPRVSEDMPLYDILNEFQKGHSHIAVVYKDLNEKKEGELFKDNCKKPRGQ 330 (351)
Q Consensus 280 ~~~~V~~~~~l~~lL~~~~~~~~~~aiVvDe~g~~~GiVT~~Dil~~l~~~ 330 (351)
++.++++++++.++++.|++++.+.++|+|++|+++|+||..|+++.+.|+
T Consensus 80 ~~~~v~~~~~l~~~~~~m~~~~~~~~~Vvd~~g~~vGivt~~dil~~l~ge 130 (130)
T 3i8n_A 80 PIQVVLNNTALPKVFDQMMTHRLQLALVVDEYGTVLGLVTLEDIFEHLVGE 130 (130)
T ss_dssp ECCEEETTSCHHHHHHHHHHHTCCEEEEECTTSCEEEEEEHHHHHHHHHTC
T ss_pred CCcCcCCCCcHHHHHHHHHHcCCeEEEEEcCCCCEEEEEEHHHHHHHHcCC
Confidence 899999999999999999999999999999999999999999999998764
No 12
>3nqr_A Magnesium and cobalt efflux protein CORC; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics; HET: AMP; 2.00A {Salmonella typhimurium}
Probab=99.86 E-value=5.2e-22 Score=162.15 Aligned_cols=125 Identities=26% Similarity=0.421 Sum_probs=109.8
Q ss_pred cccccccccccCcceEEEeCCCCccHHHHHHHHhcCCcEEeeEcCCCCceeEEeEhhhhcccccc--ccccccccccccC
Q 018729 204 TEKTAKDAMTPISKAFSLDLDATLTLDTLNAIMTMGHSRVPVYSGNPTNIIGLILVKNLLSVDYR--DAVPLRKMIIRRI 281 (351)
Q Consensus 204 ~~~~v~~iMtpr~~v~~v~~~~t~~~e~~~~~~~~~~sr~PV~~~~~d~ivGiv~~kdll~~~~~--~~~~l~~i~~~~~ 281 (351)
++.+|+++|+|+.+++++++++++. ++++.+.+++++++||++++.++++|+++.+|++....+ .+.++.++ ++++
T Consensus 1 ~~~~v~diM~~~~~~~~v~~~~~~~-~a~~~m~~~~~~~~pVvd~~~~~~vGivt~~dl~~~~~~~~~~~~v~~~-m~~~ 78 (127)
T 3nqr_A 1 ADQRVRDIMIPRSQMITLKRNQTLD-ECLDVIIESAHSRFPVISEDKDHIEGILMAKDLLPFMRSDAEAFSMDKV-LRTA 78 (127)
T ss_dssp --CBHHHHSEEGGGCCCEETTCCHH-HHHHHHHHHCCSEEEEESSSTTCEEEEEEGGGGGGGGSTTCCCCCHHHH-CBCC
T ss_pred CCcCHHHhcccHHHeEEEcCCCCHH-HHHHHHHhCCCCEEEEEcCCCCcEEEEEEHHHHHHHHhccCCCCCHHHH-cCCC
Confidence 3678999999988899999999998 999999999999999998755799999999999876432 34678888 5788
Q ss_pred ceeCCCCCHHHHHHHHhhCCceEEEEEecCCCcccccchhhhhccccCC
Q 018729 282 PRVSEDMPLYDILNEFQKGHSHIAVVYKDLNEKKEGELFKDNCKKPRGQ 330 (351)
Q Consensus 282 ~~V~~~~~l~~lL~~~~~~~~~~aiVvDe~g~~~GiVT~~Dil~~l~~~ 330 (351)
.++++++++.++++.|++++.+.++|+|++|+++|+||..|+++.+.|+
T Consensus 79 ~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~~~Giit~~dll~~l~ge 127 (127)
T 3nqr_A 79 VVVPESKRVDRMLKEFRSQRYHMAIVIDEFGGVSGLVTIEDILELIVGE 127 (127)
T ss_dssp CEEETTCBHHHHHHHHHHTTCCEEEEECTTSCEEEEEEHHHHHHHC---
T ss_pred eEECCCCcHHHHHHHHHhcCCeEEEEEeCCCCEEEEEEHHHHHHHHhCC
Confidence 9999999999999999999999999999999999999999999998764
No 13
>2yvy_A MGTE, Mg2+ transporter MGTE; membrane protein, transport protein; 2.30A {Thermus thermophilus} PDB: 2yvz_A
Probab=99.82 E-value=1.8e-20 Score=173.93 Aligned_cols=142 Identities=11% Similarity=0.103 Sum_probs=124.2
Q ss_pred CCCCHHHHHHHHhhhcccccccccccccCcceEEEeCCCCccHHHHHHHHhc-----CCcEEeeEcCCCCceeEEeEhhh
Q 018729 187 GDLTHDETTIIAGALELTEKTAKDAMTPISKAFSLDLDATLTLDTLNAIMTM-----GHSRVPVYSGNPTNIIGLILVKN 261 (351)
Q Consensus 187 g~l~~~e~~~i~~vl~l~~~~v~~iMtpr~~v~~v~~~~t~~~e~~~~~~~~-----~~sr~PV~~~~~d~ivGiv~~kd 261 (351)
|.+++.++..+.+++.+.+.+|+++|+| +++++++++++. ++++.+.++ +++++||++++ ++++|+|+.+|
T Consensus 116 ~~l~~~~~~~i~~~l~~~~~~v~~iM~~--~~~~v~~~~tv~-ea~~~~~~~~~~~~~~~~~~Vvd~~-~~lvGivt~~d 191 (278)
T 2yvy_A 116 DLLDPRTRAEVEALARYEEDEAGGLMTP--EYVAVREGMTVE-EVLRFLRRAAPDAETIYYIYVVDEK-GRLKGVLSLRD 191 (278)
T ss_dssp HHSCHHHHHHHHHHHHSCTTBGGGTCBS--CCCEECTTSBHH-HHHHHHHHHTTTCSCSSEEEEECTT-CBEEEEEEHHH
T ss_pred HcCCHHHHHHHHHHHCCCcchHHhhcCC--CceEECCCCcHH-HHHHHHHHccCCccceeEEEEECCC-CCEEEEEEHHH
Confidence 4678899999999999999999999987 779999999998 999999987 78999999876 89999999999
Q ss_pred hccccccccccccccccccCceeCCCCCHHHHHHHHhhCCceEEEEEecCCCcccccchhhhhccccCCCCCC
Q 018729 262 LLSVDYRDAVPLRKMIIRRIPRVSEDMPLYDILNEFQKGHSHIAVVYKDLNEKKEGELFKDNCKKPRGQPEKS 334 (351)
Q Consensus 262 ll~~~~~~~~~l~~i~~~~~~~V~~~~~l~~lL~~~~~~~~~~aiVvDe~g~~~GiVT~~Dil~~l~~~~~~~ 334 (351)
++... .+.++.++|.+++++|++++++.++++.|++++.+.++|||++|+++|+||..|+++.+.++....
T Consensus 192 ll~~~--~~~~v~~im~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~lvGivT~~Dil~~i~~e~~ed 262 (278)
T 2yvy_A 192 LIVAD--PRTRVAEIMNPKVVYVRTDTDQEEVARLMADYDFTVLPVVDEEGRLVGIVTVDDVLDVLEAEATED 262 (278)
T ss_dssp HHHSC--TTCBSTTTSBSSCCCEETTSBHHHHHHHHHHHTCSEEEEECTTSBEEEEEEHHHHHHHC-------
T ss_pred HhcCC--CCCcHHHHhCCCCeEEeCCCCHHHHHHHHHhcCCCEEEEEeCCCeEEEEEEHHHHHHHHHHHhHHH
Confidence 98653 346789987789999999999999999999999999999999999999999999999998776544
No 14
>2zy9_A Mg2+ transporter MGTE; membrane protien, metal transport; 2.94A {Thermus thermophilus} PDB: 2yvx_A
Probab=99.80 E-value=9.7e-20 Score=181.11 Aligned_cols=154 Identities=12% Similarity=0.097 Sum_probs=136.4
Q ss_pred cccHHHHHHHHHhcccccccC---------CCCCHHHHHHHHhhhcccccccccccccCcceEEEeCCCCccHHHHHHHH
Q 018729 166 LLRRAELKTFVNFHGNEAGKG---------GDLTHDETTIIAGALELTEKTAKDAMTPISKAFSLDLDATLTLDTLNAIM 236 (351)
Q Consensus 166 ~~t~eEl~~lv~~~~~e~~~~---------g~l~~~e~~~i~~vl~l~~~~v~~iMtpr~~v~~v~~~~t~~~e~~~~~~ 236 (351)
.+++||+..+++. ..++ +.++++|++++++++++++.+|+++|+| ++++++++++++ ++++.+.
T Consensus 110 ~l~~dd~~~ll~~----l~~~~~~~~~~ll~~l~~~~~~~i~~~l~~~~~~v~~iM~~--~~v~v~~~~tv~-ea~~~~~ 182 (473)
T 2zy9_A 110 ELSLDDLADALQA----VRKEDPAYFQRLKDLLDPRTRAEVEALARYEEDEAGGLMTP--EYVAVREGMTVE-EVLRFLR 182 (473)
T ss_dssp HSCHHHHHHHHHH----HHHSCHHHHHHHTTSSCHHHHHHHHHHHTSCTTBSTTTCBS--CEEEECTTCBHH-HHHHHHH
T ss_pred hCCHHHHHHHHHh----CCHhHHHHHHHHHhcCCHHHHHHHHHHhcCCCCCHHHhCCC--CceEeCCCCcHH-HHHHHHH
Confidence 4677888888873 3344 7899999999999999999999999987 789999999998 9999999
Q ss_pred hc-----CCcEEeeEcCCCCceeEEeEhhhhccccccccccccccccccCceeCCCCCHHHHHHHHhhCCceEEEEEecC
Q 018729 237 TM-----GHSRVPVYSGNPTNIIGLILVKNLLSVDYRDAVPLRKMIIRRIPRVSEDMPLYDILNEFQKGHSHIAVVYKDL 311 (351)
Q Consensus 237 ~~-----~~sr~PV~~~~~d~ivGiv~~kdll~~~~~~~~~l~~i~~~~~~~V~~~~~l~~lL~~~~~~~~~~aiVvDe~ 311 (351)
++ +++++||++++ ++++|+++.+|++... .+.+++++|.+++++|++++++.++++.|++++.+.++|||++
T Consensus 183 ~~~~~~~~~~~ipVvd~~-~~lvGiVt~~Dll~~~--~~~~v~dim~~~~~~v~~~~~l~ea~~~m~~~~~~~lpVVDe~ 259 (473)
T 2zy9_A 183 RAAPDAETIYYIYVVDEK-GRLKGVLSLRDLIVAD--PRTRVAEIMNPKVVYVRTDTDQEEVARLMADYDFTVLPVVDEE 259 (473)
T ss_dssp HHGGGCSEEEEEEEECTT-SBEEEEEEHHHHHHSC--TTSBGGGTSBSSCCCEESSSBHHHHHHHHHHHTCSEEEEECTT
T ss_pred hccCCcCceeEEEEECCC-CcEEEEEEHHHHhcCC--CCCcHHHHhCCCCeEEeCCCcHHHHHHHHHhcCCcEEEEEcCC
Confidence 86 47999999876 8999999999998643 3468999977899999999999999999999999999999999
Q ss_pred CCcccccchhhhhccccC
Q 018729 312 NEKKEGELFKDNCKKPRG 329 (351)
Q Consensus 312 g~~~GiVT~~Dil~~l~~ 329 (351)
|+++|+||.+|+++.+.+
T Consensus 260 g~lvGiIT~~Dil~~i~~ 277 (473)
T 2zy9_A 260 GRLVGIVTVDDVLDVLEA 277 (473)
T ss_dssp SBEEEEEEHHHHHHHHHH
T ss_pred CEEEEEEehHhhHHHHHH
Confidence 999999999999987643
No 15
>4esy_A CBS domain containing membrane protein; structural genomics, PSI-biology; 2.01A {Sphaerobacter thermophilus}
Probab=99.79 E-value=3.9e-19 Score=152.53 Aligned_cols=134 Identities=15% Similarity=0.165 Sum_probs=113.5
Q ss_pred HHHHHHHhhhcccccccccccccCcceEEEeCCCCccHHHHHHHHhcCCcEEeeEcCCCCceeEEeEhhhhcccccc---
Q 018729 192 DETTIIAGALELTEKTAKDAMTPISKAFSLDLDATLTLDTLNAIMTMGHSRVPVYSGNPTNIIGLILVKNLLSVDYR--- 268 (351)
Q Consensus 192 ~e~~~i~~vl~l~~~~v~~iMtpr~~v~~v~~~~t~~~e~~~~~~~~~~sr~PV~~~~~d~ivGiv~~kdll~~~~~--- 268 (351)
.+++.+.+. +++.+|+|+|++ +++++++++++. ++++.+.+++++.+||++++ |+++|+++.+|+++....
T Consensus 6 ~~~~~~~~~--l~~~~V~diM~~--~v~~v~~~~tl~-~a~~~m~~~~~~~~pVvd~~-g~lvGiit~~Dll~~~~~~~~ 79 (170)
T 4esy_A 6 ARRRAIARA--IRQVPIRDILTS--PVVTVREDDTLD-AVAKTMLEHQIGCAPVVDQN-GHLVGIITESDFLRGSIPFWI 79 (170)
T ss_dssp HHHHHHHHH--HHTSBGGGGCCS--CCCCEETTSBHH-HHHHHHHHTTCSEEEEECTT-SCEEEEEEGGGGGGGTCCTTH
T ss_pred HHHHHHHHH--HcCCCHHHhcCC--CCcEECCcCcHH-HHHHHHHHcCCeEEEEEcCC-ccEEEEEEHHHHHHHHhhccc
Confidence 334455554 468899999986 779999999998 99999999999999999876 899999999999864321
Q ss_pred -----------------------ccccccccccccCceeCCCCCHHHHHHHHhhCCceEEEEEecCCCcccccchhhhhc
Q 018729 269 -----------------------DAVPLRKMIIRRIPRVSEDMPLYDILNEFQKGHSHIAVVYKDLNEKKEGELFKDNCK 325 (351)
Q Consensus 269 -----------------------~~~~l~~i~~~~~~~V~~~~~l~~lL~~~~~~~~~~aiVvDe~g~~~GiVT~~Dil~ 325 (351)
...++.++|.++++++++++++.++++.|.+++.+.++|+|+ |+++|+||..|+++
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~im~~~~~tv~~~~~l~~a~~~m~~~~~~~lpVvd~-g~lvGivt~~Dil~ 158 (170)
T 4esy_A 80 YEASEILSRAIPAPEVEHLFETGRKLTASAVMTQPVVTAAPEDSVGSIADQMRRHGIHRIPVVQD-GVPVGIVTRRDLLK 158 (170)
T ss_dssp HHHHHHHTTTSCHHHHHHHHHHHTTCBHHHHCBCCSCCBCTTSBHHHHHHHHHHTTCSEEEEEET-TEEEEEEEHHHHTT
T ss_pred cchhhhhhhccchhhHHhhhccccccchhhhcccCcccCCcchhHHHHHHHHHHcCCcEEEEEEC-CEEEEEEEHHHHHH
Confidence 124677888889999999999999999999999999999985 99999999999999
Q ss_pred cccCCCC
Q 018729 326 KPRGQPE 332 (351)
Q Consensus 326 ~l~~~~~ 332 (351)
.+..+..
T Consensus 159 ~l~~~~~ 165 (170)
T 4esy_A 159 LLLLEES 165 (170)
T ss_dssp TSCCC--
T ss_pred HHHhccC
Confidence 9877643
No 16
>3ctu_A CBS domain protein; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; 2.81A {Streptococcus pneumoniae TIGR4} PDB: 3k6e_A
Probab=99.77 E-value=2e-19 Score=151.64 Aligned_cols=135 Identities=14% Similarity=0.110 Sum_probs=114.9
Q ss_pred HhhhcccccccccccccCcceEEEeCCCCccHHHHHHHHhcCCcEEeeEcCCCCceeEEeEhhhhccccccc--------
Q 018729 198 AGALELTEKTAKDAMTPISKAFSLDLDATLTLDTLNAIMTMGHSRVPVYSGNPTNIIGLILVKNLLSVDYRD-------- 269 (351)
Q Consensus 198 ~~vl~l~~~~v~~iMtpr~~v~~v~~~~t~~~e~~~~~~~~~~sr~PV~~~~~d~ivGiv~~kdll~~~~~~-------- 269 (351)
.+..++...+++++|+|+.+++++++++++. ++++.+.+++++++||++++ ++++|+++.+|++.....+
T Consensus 7 ~~~~~l~~~~v~dim~p~~~~~~v~~~~~l~-~a~~~m~~~~~~~~~Vvd~~-~~~~Giit~~dl~~~~~~~~~~~~~~~ 84 (156)
T 3ctu_A 7 KEFETFLLGQEETFLTPAKNLAVLIDTHNAD-HATLLLSQMTYTRVPVVTDE-KQFVGTIGLRDIMAYQMEHDLSQEIMA 84 (156)
T ss_dssp HHHHHHHHTTGGGGEEEGGGCCCEETTSBHH-HHHHHHTTCSSSEEEEECC--CBEEEEEEHHHHHHHHHHHTCCHHHHT
T ss_pred HHHHHHHHHHHHHHcCcccCceEECCCCCHH-HHHHHHHHCCCceEeEECCC-CEEEEEEcHHHHHHHHHhccccccccc
Confidence 3455677789999999999999999999998 99999999999999999875 8999999999998754321
Q ss_pred cccccccccccCceeCCCCCHHHHHHHHhhCCceEEEEEecCCCcccccchhhhhccccCCCCCCCC
Q 018729 270 AVPLRKMIIRRIPRVSEDMPLYDILNEFQKGHSHIAVVYKDLNEKKEGELFKDNCKKPRGQPEKSSQ 336 (351)
Q Consensus 270 ~~~l~~i~~~~~~~V~~~~~l~~lL~~~~~~~~~~aiVvDe~g~~~GiVT~~Dil~~l~~~~~~~~~ 336 (351)
..++.++|.++++++++++++.++++.|.+++ .++|+|++|+++|+||..|+++.+.....+...
T Consensus 85 ~~~v~~~m~~~~~~v~~~~~l~~a~~~~~~~~--~lpVvd~~g~~~Giit~~dil~~l~~~~~~~~~ 149 (156)
T 3ctu_A 85 DTDIVHMTKTDVAVVSPDFTITEVLHKLVDES--FLPVVDAEGIFQGIITRKSILKAVNALLHDFSK 149 (156)
T ss_dssp TSBGGGGCBCSCCCBCSSCCHHHHHHHTTTSS--EEEEECTTSBEEEEEETTHHHHHHHHHSCC---
T ss_pred cCcHHHhccCCceeeCCCCcHHHHHHHHHHcC--eEEEEcCCCeEEEEEEHHHHHHHHHHHHHhhch
Confidence 46788987788899999999999999999886 588999999999999999999998776655444
No 17
>2emq_A Hypothetical conserved protein; CBS domains, NPPSFA, national project on protein structural functional analyses; 2.50A {Geobacillus kaustophilus}
Probab=99.77 E-value=5.1e-19 Score=149.08 Aligned_cols=136 Identities=18% Similarity=0.168 Sum_probs=111.5
Q ss_pred HHhhhcccccccccccccCcceEEEeCCCCccHHHHHHHHhcCCcEEeeEcCCCCceeEEeEhhhhcccccc--------
Q 018729 197 IAGALELTEKTAKDAMTPISKAFSLDLDATLTLDTLNAIMTMGHSRVPVYSGNPTNIIGLILVKNLLSVDYR-------- 268 (351)
Q Consensus 197 i~~vl~l~~~~v~~iMtpr~~v~~v~~~~t~~~e~~~~~~~~~~sr~PV~~~~~d~ivGiv~~kdll~~~~~-------- 268 (351)
.++...+.+.+|+++|+|+.++.++++++++. ++++.+.+++++++||++++ ++++|+++.+|++.....
T Consensus 2 ~~~~~~l~~~~v~~im~~~~~~~~v~~~~~~~-~a~~~m~~~~~~~~pVvd~~-~~~~Givt~~dl~~~~~~~~~~~~~~ 79 (157)
T 2emq_A 2 TWEHNEFMQMTVKPFLIPADKVAHVQPGNYLD-HALLVLTKTGYSAIPVLDTS-YKLHGLISMTMMMDAILGLERIEFER 79 (157)
T ss_dssp --------CCBSTTTCEEGGGSCCBCTTSBHH-HHHHHHHHSSSSEEEEECTT-CCEEEEEEHHHHHHHSBCSSSBCGGG
T ss_pred chhHhhHhhCcHHhhccCCccceEECCCCcHH-HHHHHHHHCCceEEEEEcCC-CCEEEEeeHHHHHHHHhcccccchHH
Confidence 34556678899999999877888999999998 99999999999999999875 899999999999865432
Q ss_pred -ccccccccccccCceeCCCCCHHHHHHHHhhCCceEEEEEecCCCcccccchhhhhccccCCCCCCCC
Q 018729 269 -DAVPLRKMIIRRIPRVSEDMPLYDILNEFQKGHSHIAVVYKDLNEKKEGELFKDNCKKPRGQPEKSSQ 336 (351)
Q Consensus 269 -~~~~l~~i~~~~~~~V~~~~~l~~lL~~~~~~~~~~aiVvDe~g~~~GiVT~~Dil~~l~~~~~~~~~ 336 (351)
...++.++|.++++++++++++.++++.|.+++. ++|+|++|+++|+||..|+++.+.+.......
T Consensus 80 ~~~~~v~~~m~~~~~~v~~~~~l~~a~~~m~~~~~--l~Vvd~~g~~~Giit~~dil~~~~~~~~~~~~ 146 (157)
T 2emq_A 80 LETMKVEEVMNRNIPRLRLDDSLMKAVGLIVNHPF--VCVENDDGYFAGIFTRREVLKQLNKQLHRPNG 146 (157)
T ss_dssp GGTCBGGGTCBCCCCEEETTSBHHHHHHHHHHSSE--EEEECSSSSEEEEEEHHHHHHHHHHTTCCC--
T ss_pred hcCCcHHHHhCCCCceecCCCcHHHHHHHHhhCCE--EEEEcCCCeEEEEEEHHHHHHHHHHHhhcccc
Confidence 2457888877889999999999999999999976 88999999999999999999988776554433
No 18
>4gqw_A CBS domain-containing protein CBSX1, chloroplasti; thioredoxin, plant, protein binding; 2.20A {Arabidopsis thaliana}
Probab=99.76 E-value=8.4e-19 Score=146.35 Aligned_cols=127 Identities=13% Similarity=0.076 Sum_probs=110.3
Q ss_pred cccccccccccCcceEEEeCCCCccHHHHHHHHhcCCcEEeeEcCCCCceeEEeEhhhhccccc----------------
Q 018729 204 TEKTAKDAMTPISKAFSLDLDATLTLDTLNAIMTMGHSRVPVYSGNPTNIIGLILVKNLLSVDY---------------- 267 (351)
Q Consensus 204 ~~~~v~~iMtpr~~v~~v~~~~t~~~e~~~~~~~~~~sr~PV~~~~~d~ivGiv~~kdll~~~~---------------- 267 (351)
+..+|+++|+|+.+++++++++++. ++++.+.+++++++||++++ ++++|+++.+|++....
T Consensus 3 ~~~~v~~im~~~~~~~~v~~~~~~~-~a~~~~~~~~~~~~~Vvd~~-~~~~G~vt~~dl~~~~~~~~~~~~~~~~~~~~~ 80 (152)
T 4gqw_A 3 GVYTVGEFMTKKEDLHVVKPTTTVD-EALELLVENRITGFPVIDED-WKLVGLVSDYDLLALDSGDSTWKTFNAVQKLLS 80 (152)
T ss_dssp CCSBGGGTSEESTTCCCBCTTSBHH-HHHHHHHHTTCSEEEEECTT-CBEEEEEEHHHHTTCC----CCHHHHHHHTC--
T ss_pred ceEEhhhccCCCCCCeEECCCCcHH-HHHHHHHHcCCceEEEEeCC-CeEEEEEEHHHHHHhhcccCcccchHHHHHHHH
Confidence 4578999999988889999999998 99999999999999999876 79999999999986421
Q ss_pred -cccccccccccccCceeCCCCCHHHHHHHHhhCCceEEEEEecCCCcccccchhhhhccccCCCC
Q 018729 268 -RDAVPLRKMIIRRIPRVSEDMPLYDILNEFQKGHSHIAVVYKDLNEKKEGELFKDNCKKPRGQPE 332 (351)
Q Consensus 268 -~~~~~l~~i~~~~~~~V~~~~~l~~lL~~~~~~~~~~aiVvDe~g~~~GiVT~~Dil~~l~~~~~ 332 (351)
....++.++|.++++++++++++.++++.|.+++.+.++|+|++|+++|+||..|+++.+.....
T Consensus 81 ~~~~~~v~~~m~~~~~~v~~~~~l~~a~~~~~~~~~~~l~Vvd~~g~~~Giit~~dil~~~~~~~~ 146 (152)
T 4gqw_A 81 KTNGKLVGDLMTPAPLVVEEKTNLEDAAKILLETKYRRLPVVDSDGKLVGIITRGNVVRAALQIKR 146 (152)
T ss_dssp ---CCBHHHHSEESCCCEESSSBHHHHHHHHHHSSCCEEEEECTTSBEEEEEEHHHHHHHHHC---
T ss_pred HhccccHHHhcCCCceEECCCCcHHHHHHHHHHCCCCEEEEECCCCcEEEEEEHHHHHHHHHhccc
Confidence 12357888877778899999999999999999999999999999999999999999998876544
No 19
>3lqn_A CBS domain protein; csgid, structural genomics, unknown function, center for structural genomics of infectious diseases; 1.80A {Bacillus anthracis} SCOP: d.37.1.0
Probab=99.75 E-value=4.3e-19 Score=148.51 Aligned_cols=128 Identities=15% Similarity=0.100 Sum_probs=111.7
Q ss_pred hcccccccccccccCcceEEEeCCCCccHHHHHHHHhcCCcEEeeEcCCCCceeEEeEhhhhcccccc---------ccc
Q 018729 201 LELTEKTAKDAMTPISKAFSLDLDATLTLDTLNAIMTMGHSRVPVYSGNPTNIIGLILVKNLLSVDYR---------DAV 271 (351)
Q Consensus 201 l~l~~~~v~~iMtpr~~v~~v~~~~t~~~e~~~~~~~~~~sr~PV~~~~~d~ivGiv~~kdll~~~~~---------~~~ 271 (351)
-.|.+++|+++|+|..++.++++++++. ++++.+.+++++++||++++ ++++|+++.+|++..... ...
T Consensus 10 ~~l~~~~v~~im~~~~~~~~v~~~~~l~-~a~~~~~~~~~~~~pVvd~~-~~~~Givt~~dl~~~~~~~~~~~~~~~~~~ 87 (150)
T 3lqn_A 10 DEFQQIFVKDLMISSEKVAHVQIGNGLE-HALLVLVKSGYSAIPVLDPM-YKLHGLISTAMILDGILGLERIEFERLEEM 87 (150)
T ss_dssp HHHHHCBHHHHSEEGGGSCCBCTTSBHH-HHHHHHHHHTCSEEEEECTT-CBEEEEEEHHHHHHHTBCSSSBCGGGGGGC
T ss_pred HhhhcCChhhcccCCCceEEECCCCcHH-HHHHHHHHcCCcEEEEECCC-CCEEEEEEHHHHHHHHHhhcccchhHHhcC
Confidence 3467899999999987889999999998 99999999999999999875 899999999999865421 245
Q ss_pred cccccccccCceeCCCCCHHHHHHHHhhCCceEEEEEecCCCcccccchhhhhccccCCCC
Q 018729 272 PLRKMIIRRIPRVSEDMPLYDILNEFQKGHSHIAVVYKDLNEKKEGELFKDNCKKPRGQPE 332 (351)
Q Consensus 272 ~l~~i~~~~~~~V~~~~~l~~lL~~~~~~~~~~aiVvDe~g~~~GiVT~~Dil~~l~~~~~ 332 (351)
++.++|.+++.++++++++.++++.|.+++. .+|+|++|+++|+||..|+++.+....+
T Consensus 88 ~v~~~m~~~~~~v~~~~~l~~a~~~~~~~~~--l~Vvd~~g~~~Giit~~dil~~l~~~~~ 146 (150)
T 3lqn_A 88 KVEQVMKQDIPVLKLEDSFAKALEMTIDHPF--ICAVNEDGYFEGILTRRAILKLLNKKVR 146 (150)
T ss_dssp BGGGTCBSSCCEEETTCBHHHHHHHHHHCSE--EEEECTTCBEEEEEEHHHHHHHHHHHC-
T ss_pred CHHHHhcCCCceeCCCCCHHHHHHHHHhCCE--EEEECCCCcEEEEEEHHHHHHHHHHHhH
Confidence 7888877888999999999999999998875 8899999999999999999998876544
No 20
>2oux_A Magnesium transporter; 10001B, structural genomics, PSI-2, P structure initiative, nysgxrc; 2.16A {Enterococcus faecalis} SCOP: a.118.26.1 d.37.1.1
Probab=99.75 E-value=1.6e-18 Score=161.52 Aligned_cols=136 Identities=16% Similarity=0.125 Sum_probs=123.7
Q ss_pred CCCHHHHHHHHhhhcccccccccccccCcceEEEeCCCCccHHHHHHHHhc-----CCcEEeeEcCCCCceeEEeEhhhh
Q 018729 188 DLTHDETTIIAGALELTEKTAKDAMTPISKAFSLDLDATLTLDTLNAIMTM-----GHSRVPVYSGNPTNIIGLILVKNL 262 (351)
Q Consensus 188 ~l~~~e~~~i~~vl~l~~~~v~~iMtpr~~v~~v~~~~t~~~e~~~~~~~~-----~~sr~PV~~~~~d~ivGiv~~kdl 262 (351)
.++.+++..+++++.+.+.+|+++|+| ++++++.++++. ++++.+.++ +++++||++++ ++++|+|+.+|+
T Consensus 119 ~l~~~e~~~i~~ll~~~~~~v~~iM~~--~~~~v~~~~tv~-ea~~~~~~~~~~~~~~~~~pVvd~~-~~lvGivt~~dl 194 (286)
T 2oux_A 119 LLSSEEAGEIKELLHYEDETAGAIMTT--EFVSIVANQTVR-SAMYVLKNQADMAETIYYVYVVDQE-NHLVGVISLRDL 194 (286)
T ss_dssp TSCHHHHHHHHHHTTSCTTBHHHHCBS--CCCEECSSSBHH-HHHHHHHHHCSSCSCCSEEEEECTT-CBEEEEEEHHHH
T ss_pred cCCHHHHHHHHHHhcCChHHHHHhCCC--CceEECCCCcHH-HHHHHHHHcccCccceeEEEEEcCC-CeEEEEEEHHHH
Confidence 578888999999999999999999987 678999999998 999999987 88999999875 899999999999
Q ss_pred ccccccccccccccccccCceeCCCCCHHHHHHHHhhCCceEEEEEecCCCcccccchhhhhccccC
Q 018729 263 LSVDYRDAVPLRKMIIRRIPRVSEDMPLYDILNEFQKGHSHIAVVYKDLNEKKEGELFKDNCKKPRG 329 (351)
Q Consensus 263 l~~~~~~~~~l~~i~~~~~~~V~~~~~l~~lL~~~~~~~~~~aiVvDe~g~~~GiVT~~Dil~~l~~ 329 (351)
+... .+.++.++|.+++++|++++++.++++.|++++.+.++|||++|+++|+||..|+++.+..
T Consensus 195 l~~~--~~~~v~~im~~~~~~v~~~~~l~ea~~~m~~~~~~~lpVVd~~g~lvGiIT~~Dil~~i~~ 259 (286)
T 2oux_A 195 IVND--DDTLIADILNERVISVHVGDDQEDVAQTIRDYDFLAVPVTDYDDHLLGIVTVDDIIDVIDD 259 (286)
T ss_dssp TTSC--TTSBHHHHSBSCCCCEETTSBHHHHHHHHHHHTCSEEEEECTTCBEEEEEEHHHHHHHHHH
T ss_pred HcCC--CCCcHHHHcCCCCeeecCCCCHHHHHHHHHHcCCcEEEEEcCCCeEEEEEEHHHHHHHHHH
Confidence 8753 3457889877889999999999999999999999999999999999999999999987654
No 21
>2qrd_G Protein C1556.08C; AMPK, ADP, ATP-binding, kinase, nucleotide-binding, serine/T protein kinase, transferase, CBS domain; HET: ADP ATP; 2.41A {Schizosaccharomyces pombe} PDB: 2qrc_G* 2qr1_G* 2qre_G* 2oox_G* 2ooy_G*
Probab=99.75 E-value=1e-18 Score=165.34 Aligned_cols=140 Identities=11% Similarity=0.069 Sum_probs=120.0
Q ss_pred CCCHHHHHHHHhhhcccc-cccccccccCcceEEEeCCCCccHHHHHHHHhcCCcEEeeEcCCCCceeEEeEhhhhcccc
Q 018729 188 DLTHDETTIIAGALELTE-KTAKDAMTPISKAFSLDLDATLTLDTLNAIMTMGHSRVPVYSGNPTNIIGLILVKNLLSVD 266 (351)
Q Consensus 188 ~l~~~e~~~i~~vl~l~~-~~v~~iMtpr~~v~~v~~~~t~~~e~~~~~~~~~~sr~PV~~~~~d~ivGiv~~kdll~~~ 266 (351)
.++++|+++++++++|-+ .+|+|+|+|+.++++++.++++. ++++.+.+++++++||++++.|+++|+++.+|++...
T Consensus 3 ~~~~~~~~~~~~~~~~l~~~~v~dim~~~~~vv~v~~~~tv~-~a~~~~~~~~~~~~pV~d~~~~~~vGiv~~~Dl~~~~ 81 (334)
T 2qrd_G 3 DVQETQKGALKEIQAFIRSRTSYDVLPTSFRLIVFDVTLFVK-TSLSLLTLNNIVSAPLWDSEANKFAGLLTMADFVNVI 81 (334)
T ss_dssp SHHHHHHHHHHHHHHHHHHSBGGGGSCSEEEEEEEETTSBHH-HHHHHHHHHTCSCEEEEETTTTEEEEEECHHHHHHHH
T ss_pred CCchHHHHHHHHHHHHHhcCchhhhCCCCCCEEEEcCCCCHH-HHHHHHHHcCCeEEEEEeCCCCeEEEEEEHHHHHHHH
Confidence 456789999999999655 99999999999999999999998 9999999999999999998768999999999998643
Q ss_pred c--------cc------cccccc-------cccccC--ceeCCCCCHHHHHHHHhhCCceEEEEEecCCC-----ccccc
Q 018729 267 Y--------RD------AVPLRK-------MIIRRI--PRVSEDMPLYDILNEFQKGHSHIAVVYKDLNE-----KKEGE 318 (351)
Q Consensus 267 ~--------~~------~~~l~~-------i~~~~~--~~V~~~~~l~~lL~~~~~~~~~~aiVvDe~g~-----~~GiV 318 (351)
. .. +.++.. +|.+++ .++++++++.++++.|++++.+.++|+|++|+ ++|++
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~im~~~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~~~~~~~~~~Giv 161 (334)
T 2qrd_G 82 KYYYQSSSFPEAIAEIDKFRLLGLREVERKIGAIPPETIYVHPMHSLMDACLAMSKSRARRIPLIDVDGETGSEMIVSVL 161 (334)
T ss_dssp HHHHHHCSCGGGGGGGGSCBHHHHHHHHHHHTCSCSSCCCBCTTSBHHHHHHHHHHSCCSEEEEEEEETTTTEEEEEEEE
T ss_pred HHHhhccCCccHHHHHhhhchhhHHHHHHhhccCCCceeeeCCCCcHHHHHHHHHHCCceEEEEEeCCCCcCccceEEEe
Confidence 1 11 122222 245677 89999999999999999999999999999876 99999
Q ss_pred chhhhhcccc
Q 018729 319 LFKDNCKKPR 328 (351)
Q Consensus 319 T~~Dil~~l~ 328 (351)
|..|+++.+.
T Consensus 162 t~~dl~~~~~ 171 (334)
T 2qrd_G 162 TQYRILKFIS 171 (334)
T ss_dssp EHHHHHHHHH
T ss_pred eHHHHHHHHH
Confidence 9999998664
No 22
>3kpb_A Uncharacterized protein MJ0100; CBS domain, S-adenosylmethionine, conformational change, unknown function; HET: SAM; 1.60A {Methanocaldococcus jannaschii} SCOP: d.37.1.0 PDB: 3kpd_A* 3kpc_A*
Probab=99.75 E-value=9.3e-19 Score=141.06 Aligned_cols=120 Identities=12% Similarity=0.184 Sum_probs=108.1
Q ss_pred cccccccccCcceEEEeCCCCccHHHHHHHHhcCCcEEeeEcCCCCceeEEeEhhhhccccccccccccccccccCceeC
Q 018729 206 KTAKDAMTPISKAFSLDLDATLTLDTLNAIMTMGHSRVPVYSGNPTNIIGLILVKNLLSVDYRDAVPLRKMIIRRIPRVS 285 (351)
Q Consensus 206 ~~v~~iMtpr~~v~~v~~~~t~~~e~~~~~~~~~~sr~PV~~~~~d~ivGiv~~kdll~~~~~~~~~l~~i~~~~~~~V~ 285 (351)
++|+++|+| ++.++++++++. ++++.+.+++++.+||++++ ++++|+++.+|++....++..++.++|.+++.+++
T Consensus 1 ~~v~~im~~--~~~~v~~~~~~~-~a~~~~~~~~~~~~~Vvd~~-~~~~G~vt~~dl~~~~~~~~~~v~~~~~~~~~~v~ 76 (122)
T 3kpb_A 1 TLVKDILSK--PPITAHSNISIM-EAAKILIKHNINHLPIVDEH-GKLVGIITSWDIAKALAQNKKTIEEIMTRNVITAH 76 (122)
T ss_dssp CBHHHHCCS--CCCCEETTSBHH-HHHHHHHHHTCSCEEEECTT-SBEEEEECHHHHHHHHHTTCCBGGGTSBSSCCCEE
T ss_pred CchHHhhCC--CCEEeCCCCcHH-HHHHHHHHcCCCeEEEECCC-CCEEEEEEHHHHHHHHHhcccCHHHHhcCCCeEEC
Confidence 468999987 668899999998 99999999999999999865 89999999999987655555689998778889999
Q ss_pred CCCCHHHHHHHHhhCCceEEEEEecCCCcccccchhhhhccccC
Q 018729 286 EDMPLYDILNEFQKGHSHIAVVYKDLNEKKEGELFKDNCKKPRG 329 (351)
Q Consensus 286 ~~~~l~~lL~~~~~~~~~~aiVvDe~g~~~GiVT~~Dil~~l~~ 329 (351)
+++++.++++.|.+++.+.++|+|++|+++|+||..|+++.+.+
T Consensus 77 ~~~~l~~~~~~~~~~~~~~l~Vvd~~g~~~Givt~~dl~~~l~~ 120 (122)
T 3kpb_A 77 EDEPVDHVAIKMSKYNISGVPVVDDYRRVVGIVTSEDISRLFGG 120 (122)
T ss_dssp TTSBHHHHHHHHHHHTCSEEEEECTTCBEEEEEEHHHHHHHHC-
T ss_pred CCCCHHHHHHHHHHhCCCeEEEECCCCCEEEEEeHHHHHHHhhc
Confidence 99999999999999999999999999999999999999998765
No 23
>3fhm_A Uncharacterized protein ATU1752; CBS domain, prokaryotic, bound nucleotide, AMP, NADH, struct genomics, PSI-2; HET: AMP NAI; 2.70A {Agrobacterium tumefaciens str}
Probab=99.74 E-value=1.7e-18 Score=147.67 Aligned_cols=135 Identities=10% Similarity=0.106 Sum_probs=115.2
Q ss_pred hhhcccccccccccccC-cceEEEeCCCCccHHHHHHHHhcCCcEEeeEcCCCCceeEEeEhhhhcccccc-----cccc
Q 018729 199 GALELTEKTAKDAMTPI-SKAFSLDLDATLTLDTLNAIMTMGHSRVPVYSGNPTNIIGLILVKNLLSVDYR-----DAVP 272 (351)
Q Consensus 199 ~vl~l~~~~v~~iMtpr-~~v~~v~~~~t~~~e~~~~~~~~~~sr~PV~~~~~d~ivGiv~~kdll~~~~~-----~~~~ 272 (351)
....+..++|+++|+|+ .++.++++++++. ++++.+.+++++.+||++++ ++++|+|+.+|+++.... ...+
T Consensus 17 ~~~~l~~~~v~dim~~~~~~~~~v~~~~~l~-~a~~~~~~~~~~~~~Vvd~~-~~~~Givt~~dl~~~~~~~~~~~~~~~ 94 (165)
T 3fhm_A 17 LYFQGMATFVKDLLDRKGRDVVTVGPDVSIG-EAAGTLHAHKIGAVVVTDAD-GVVLGIFTERDLVKAVAGQGAASLQQS 94 (165)
T ss_dssp CCCSSSSCBHHHHHHHHCSCCCEECTTSBHH-HHHHHHHHHTCSEEEEECTT-SCEEEEEEHHHHHHHHHHHGGGGGTSB
T ss_pred hhHhhhhcCHHHHhccCCCCCeEECCCCCHH-HHHHHHHHcCCCEEEEEcCC-CeEEEEEEHHHHHHHHHhcCCccccCC
Confidence 45567889999999985 5678999999998 99999999999999999865 899999999999865322 2467
Q ss_pred ccccccccCceeCCCCCHHHHHHHHhhCCceEEEEEecCCCcccccchhhhhccccCCCCCCCC
Q 018729 273 LRKMIIRRIPRVSEDMPLYDILNEFQKGHSHIAVVYKDLNEKKEGELFKDNCKKPRGQPEKSSQ 336 (351)
Q Consensus 273 l~~i~~~~~~~V~~~~~l~~lL~~~~~~~~~~aiVvDe~g~~~GiVT~~Dil~~l~~~~~~~~~ 336 (351)
+.++|.++++++++++++.++++.|.+++.+.++|+|+ |+++|+||..|+++.+..+......
T Consensus 95 v~~~m~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~-g~~~Giit~~dil~~~~~~~~~~~~ 157 (165)
T 3fhm_A 95 VSVAMTKNVVRCQHNSTTDQLMEIMTGGRFRHVPVEEN-GRLAGIISIGDVVKARIGEIEAEAE 157 (165)
T ss_dssp GGGTSBSSCCCBCTTCBHHHHHHHHHHHTCSEEEEEET-TEEEEEEEHHHHHHHTTCC------
T ss_pred HHHHhcCCCeEECCCCcHHHHHHHHHHcCCCEEEEEEC-CEEEEEEEHHHHHHHHHHHHHHHHH
Confidence 88987788999999999999999999999999999999 9999999999999999887665444
No 24
>2yzi_A Hypothetical protein PH0107; sheet/helix/sheet/sheet/helix, structural genomics, unknown function, NPPSFA; 2.25A {Pyrococcus horikoshii} SCOP: d.37.1.1
Probab=99.73 E-value=8.8e-18 Score=138.37 Aligned_cols=128 Identities=13% Similarity=0.212 Sum_probs=111.4
Q ss_pred hcccccccccccccCcceEEEeCCCCccHHHHHHHHhcCCcEEeeEcCCCCceeEEeEhhhhcc-cccc---cccccccc
Q 018729 201 LELTEKTAKDAMTPISKAFSLDLDATLTLDTLNAIMTMGHSRVPVYSGNPTNIIGLILVKNLLS-VDYR---DAVPLRKM 276 (351)
Q Consensus 201 l~l~~~~v~~iMtpr~~v~~v~~~~t~~~e~~~~~~~~~~sr~PV~~~~~d~ivGiv~~kdll~-~~~~---~~~~l~~i 276 (351)
+.|.+.+|+++|++ ++.++++++++. ++++.+.+++++.+||++++ ++++|+++.+|++. ...+ ...++.++
T Consensus 2 ~~l~~~~v~~im~~--~~~~v~~~~~~~-~a~~~~~~~~~~~~~Vvd~~-~~~~Givt~~dl~~~~~~~~~~~~~~v~~~ 77 (138)
T 2yzi_A 2 VMDMKAPIKVYMTK--KLLGVKPSTSVQ-EASRLMMEFDVGSLVVINDD-GNVVGFFTKSDIIRRVIVPGLPYDIPVERI 77 (138)
T ss_dssp -CCTTSBGGGTCBC--CCCEECTTSBHH-HHHHHHHHHTCSEEEEECTT-SCEEEEEEHHHHHHHTTTTCCCTTSBGGGT
T ss_pred cchhhhhHHHHhcC--CCeEECCCCcHH-HHHHHHHHcCCCEEEEEcCC-CcEEEEEeHHHHHHHHHhcCCcccCCHHHH
Confidence 46788999999985 678899999998 99999999999999999865 89999999999973 3221 24678898
Q ss_pred ccccCceeCCCCCHHHHHHHHhhCCceEEEEEecCCCcccccchhhhhccccCCCCC
Q 018729 277 IIRRIPRVSEDMPLYDILNEFQKGHSHIAVVYKDLNEKKEGELFKDNCKKPRGQPEK 333 (351)
Q Consensus 277 ~~~~~~~V~~~~~l~~lL~~~~~~~~~~aiVvDe~g~~~GiVT~~Dil~~l~~~~~~ 333 (351)
|.++++++++++++.++++.|.+++.+.+ |+|++|+++|+||..|+++.+.+..+.
T Consensus 78 m~~~~~~v~~~~~l~~~~~~m~~~~~~~l-Vvd~~g~~~Giit~~dil~~~~~~~~~ 133 (138)
T 2yzi_A 78 MTRNLITANVNTPLGEVLRKMAEHRIKHI-LIEEEGKIVGIFTLSDLLEASRRRLET 133 (138)
T ss_dssp CBCSCCEEETTSBHHHHHHHHHHHTCSEE-EEEETTEEEEEEEHHHHHHHHHCCSCC
T ss_pred hhCCCeEECCCCcHHHHHHHHHhcCCCEE-EECCCCCEEEEEEHHHHHHHHHHHHHh
Confidence 77889999999999999999999999988 999999999999999999998776543
No 25
>2ef7_A Hypothetical protein ST2348; CBS-domain, structural genomics, NPPSFA, national project on structural and functional analyses; 2.10A {Sulfolobus tokodaii} SCOP: d.37.1.1
Probab=99.73 E-value=4e-18 Score=139.52 Aligned_cols=125 Identities=17% Similarity=0.180 Sum_probs=109.4
Q ss_pred ccccccccccccCcceEEEeCCCCccHHHHHHHHhcCCcEEeeEcCCCCceeEEeEhhhhcccccc---ccccccccccc
Q 018729 203 LTEKTAKDAMTPISKAFSLDLDATLTLDTLNAIMTMGHSRVPVYSGNPTNIIGLILVKNLLSVDYR---DAVPLRKMIIR 279 (351)
Q Consensus 203 l~~~~v~~iMtpr~~v~~v~~~~t~~~e~~~~~~~~~~sr~PV~~~~~d~ivGiv~~kdll~~~~~---~~~~l~~i~~~ 279 (351)
+++.+|+++|+| ++.++++++++. ++++.+.+++++++||++ + ++++|+++.+|++....+ .+.++.++|.+
T Consensus 1 l~~~~v~~im~~--~~~~v~~~~~~~-~a~~~~~~~~~~~~~Vvd-~-~~~~Givt~~dl~~~~~~~~~~~~~v~~~~~~ 75 (133)
T 2ef7_A 1 MEEEIVKEYMKT--QVISVTKDAKLN-DIAKVMTEKNIGSVIVVD-G-NKPVGIITERDIVKAIGKGKSLETKAEEFMTA 75 (133)
T ss_dssp CCCCBGGGTSBC--SCCEEETTCBHH-HHHHHHHHHTCSEEEEEE-T-TEEEEEEEHHHHHHHHHTTCCTTCBGGGTSEE
T ss_pred CCcccHHHhccC--CCEEECCCCcHH-HHHHHHHhcCCCEEEEEE-C-CEEEEEEcHHHHHHHHhcCCCcccCHHHHcCC
Confidence 467899999987 568899999998 999999999999999998 4 799999999999765332 24578888768
Q ss_pred cCceeCCCCCHHHHHHHHhhCCceEEEEEecCCCcccccchhhhhccccCCCC
Q 018729 280 RIPRVSEDMPLYDILNEFQKGHSHIAVVYKDLNEKKEGELFKDNCKKPRGQPE 332 (351)
Q Consensus 280 ~~~~V~~~~~l~~lL~~~~~~~~~~aiVvDe~g~~~GiVT~~Dil~~l~~~~~ 332 (351)
++.++++++++.++++.|.+++.+.++|+|++|+++|+||..|+++.+....+
T Consensus 76 ~~~~v~~~~~l~~~~~~~~~~~~~~l~Vvd~~g~~~Giit~~dll~~~~~~~~ 128 (133)
T 2ef7_A 76 SLITIREDSPITGALALMRQFNIRHLPVVDDKGNLKGIISIRDITRAIDDMFE 128 (133)
T ss_dssp CCCCEETTSBHHHHHHHHHHHTCSEEEEECTTSCEEEEEEHHHHHHHHHHHC-
T ss_pred CCEEECCCCCHHHHHHHHHHcCCCEEEEECCCCeEEEEEEHHHHHHHHHHHHH
Confidence 88999999999999999999999999999999999999999999988765443
No 26
>2v8q_E 5'-AMP-activated protein kinase subunit gamma-1; phosphorylation, nucleotide-binding, serine/threonine-protei kinase, magnesium, CBS domain; HET: AMP; 2.10A {Rattus norvegicus} SCOP: d.37.1.1 d.37.1.1 PDB: 2v92_E* 2v9j_E* 2y8l_E* 2y8q_E* 2y94_E* 2ya3_E*
Probab=99.72 E-value=1.5e-18 Score=163.99 Aligned_cols=143 Identities=12% Similarity=0.184 Sum_probs=115.8
Q ss_pred cccCCCCCHHHHHHHHhhhcccccccccccccCcceEEEeCCCCccHHHHHHHHhcCCcEEeeEcCCCCceeEEeEhhhh
Q 018729 183 AGKGGDLTHDETTIIAGALELTEKTAKDAMTPISKAFSLDLDATLTLDTLNAIMTMGHSRVPVYSGNPTNIIGLILVKNL 262 (351)
Q Consensus 183 ~~~~g~l~~~e~~~i~~vl~l~~~~v~~iMtpr~~v~~v~~~~t~~~e~~~~~~~~~~sr~PV~~~~~d~ivGiv~~kdl 262 (351)
++++|.+.+.+++.+++. |.+.+|+|+|+|+.++++++.++++. ++++.+.+++++++||++++.++++|+++.+|+
T Consensus 14 ~~~~~~~~~~~~~~~~~~--l~~~~v~dim~p~~~v~~v~~~~~v~-~a~~~~~~~~~~~~pV~d~~~~~~vGivt~~Dl 90 (330)
T 2v8q_E 14 NEHSQETPESNSSVYTTF--MKSHRCYDLIPTSSKLVVFDTSLQVK-KAFFALVTNGVRAAPLWDSKKQSFVGMLTITDF 90 (330)
T ss_dssp ---------CCSCHHHHH--HHHSBGGGGSCSEEEEEEEETTSBHH-HHHHHHHHHTCSEEEEEETTTTEEEEEEEHHHH
T ss_pred ChHhhhccchhhHHHHHH--HHcCcHhhhccCCCcEEEEeCCCcHH-HHHHHHHHcCCcEEEEEeCCCCeEEEEEEHHHH
Confidence 345677777777778777 46889999999999999999999998 999999999999999999876899999999998
Q ss_pred ccccccc------------ccc-------ccccccccCceeCCCCCHHHHHHHHhhCCceEEEEEec-CCCcccccchhh
Q 018729 263 LSVDYRD------------AVP-------LRKMIIRRIPRVSEDMPLYDILNEFQKGHSHIAVVYKD-LNEKKEGELFKD 322 (351)
Q Consensus 263 l~~~~~~------------~~~-------l~~i~~~~~~~V~~~~~l~~lL~~~~~~~~~~aiVvDe-~g~~~GiVT~~D 322 (351)
+...... ..+ +.++|.++++++++++++.++++.|++++.+.++|+|+ +|+++|+||..|
T Consensus 91 l~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~im~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~~~~~~Givt~~d 170 (330)
T 2v8q_E 91 INILHRYYKSALVQIYELEEHKIETWREVYLQDSFKPLVCISPNASLFDAVSSLIRNKIHRLPVIDPESGNTLYILTHKR 170 (330)
T ss_dssp HHHHHHHHHHHTTTCCCGGGCBHHHHHHHHSSSSCCCCCCBCTTSBHHHHHHHHHHHTCSCEEEECTTTCCEEEEECHHH
T ss_pred HHHHHHHHhccccchhHHhhccHHHHHHHHhhcccCCceEeCCCCCHHHHHHHHHHCCCCeEEEEeCCCCcEEEEEcHHH
Confidence 7642110 111 23455688899999999999999999999999999998 999999999999
Q ss_pred hhcccc
Q 018729 323 NCKKPR 328 (351)
Q Consensus 323 il~~l~ 328 (351)
+++.+.
T Consensus 171 l~~~~~ 176 (330)
T 2v8q_E 171 ILKFLK 176 (330)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 998764
No 27
>3gby_A Uncharacterized protein CT1051; CBS domain, structural genomics, PSI-2, protein structure initiative; HET: EPE; 1.66A {Chlorobium tepidum tls}
Probab=99.72 E-value=6.4e-18 Score=137.77 Aligned_cols=121 Identities=12% Similarity=0.087 Sum_probs=107.9
Q ss_pred cccccccccccCcceEEEeCCCCccHHHHHHHHhcCCcEEeeEcCCCCceeEEeEhhhhcccccccc---cccccccccc
Q 018729 204 TEKTAKDAMTPISKAFSLDLDATLTLDTLNAIMTMGHSRVPVYSGNPTNIIGLILVKNLLSVDYRDA---VPLRKMIIRR 280 (351)
Q Consensus 204 ~~~~v~~iMtpr~~v~~v~~~~t~~~e~~~~~~~~~~sr~PV~~~~~d~ivGiv~~kdll~~~~~~~---~~l~~i~~~~ 280 (351)
.+.+++++|++ ++.++++++++. ++++.+.+++++.+||+++ ++++|+++.+|+++...++. .++.++|.++
T Consensus 3 ~s~~v~~~m~~--~~~~v~~~~~~~-~a~~~~~~~~~~~~~Vvd~--~~~~Givt~~dl~~~~~~~~~~~~~v~~~m~~~ 77 (128)
T 3gby_A 3 ASVTFSYLAET--DYPVFTLGGSTA-DAARRLAASGCACAPVLDG--ERYLGMVHLSRLLEGRKGWPTVKEKLGEELLET 77 (128)
T ss_dssp TTCBGGGGCBC--CSCCEETTSBHH-HHHHHHHHHTCSEEEEEET--TEEEEEEEHHHHHTTCSSSCCTTCBCCGGGCBC
T ss_pred cceEHHHhhcC--CcceECCCCCHH-HHHHHHHHCCCcEEEEEEC--CEEEEEEEHHHHHHHHhhCCcccCcHHHHccCC
Confidence 46799999987 567899999998 9999999999999999986 89999999999987654322 5688987788
Q ss_pred CceeCCCCCHHHHHHHHhhCCceEEEEEecCCCcccccchhhhhccccC
Q 018729 281 IPRVSEDMPLYDILNEFQKGHSHIAVVYKDLNEKKEGELFKDNCKKPRG 329 (351)
Q Consensus 281 ~~~V~~~~~l~~lL~~~~~~~~~~aiVvDe~g~~~GiVT~~Dil~~l~~ 329 (351)
+.++++++++.++++.|.+++.+..+|+|++|+++|+||..|+++.+..
T Consensus 78 ~~~v~~~~~l~~~~~~~~~~~~~~lpVvd~~g~~~Giit~~dll~~l~~ 126 (128)
T 3gby_A 78 VRSYRPGEQLFDNLISVAAAKCSVVPLADEDGRYEGVVSRKRILGFLAE 126 (128)
T ss_dssp CCCBCTTSBGGGSHHHHHHCSSSEEEEECTTCBEEEEEEHHHHHHHHHT
T ss_pred CcEECCCCCHHHHHHHHHhCCCcEEEEECCCCCEEEEEEHHHHHHHHHh
Confidence 8999999999999999999999999999999999999999999987753
No 28
>3k2v_A Putative D-arabinose 5-phosphate isomerase; KPSF-like protein, CBS domain, structural genomics, PSI-2, P structure initiative; HET: MSE CMK; 1.95A {Klebsiella pneumoniae subsp} PDB: 3fna_A*
Probab=99.72 E-value=5.1e-18 Score=142.11 Aligned_cols=118 Identities=20% Similarity=0.155 Sum_probs=105.7
Q ss_pred cccccccccCcceEEEeCCCCccHHHHHHHHhcCCcEEeeEcCCCCceeEEeEhhhhcccccc----ccccccccccccC
Q 018729 206 KTAKDAMTPISKAFSLDLDATLTLDTLNAIMTMGHSRVPVYSGNPTNIIGLILVKNLLSVDYR----DAVPLRKMIIRRI 281 (351)
Q Consensus 206 ~~v~~iMtpr~~v~~v~~~~t~~~e~~~~~~~~~~sr~PV~~~~~d~ivGiv~~kdll~~~~~----~~~~l~~i~~~~~ 281 (351)
++|+++|+|+.++.++++++++. ++++.+.+++++.+||++++ ++++|+|+.+|++....+ .+.++.++|.+++
T Consensus 28 ~~v~dim~~~~~~~~v~~~~~~~-~a~~~m~~~~~~~~~Vvd~~-~~~~Givt~~dl~~~~~~~~~~~~~~v~~~m~~~~ 105 (149)
T 3k2v_A 28 LRVNDIMHTGDEIPHVGLQATLR-DALLEITRKNLGMTAICDDD-MNIIGIFTDGDLRRVFDTGVDMRDASIADVMTRGG 105 (149)
T ss_dssp SBGGGTSBCGGGSCEECTTCBHH-HHHHHHHHHTSSEEEEECTT-CBEEEEEEHHHHHHHHCSSSCCTTCBHHHHSEESC
T ss_pred cCHHHHhcCCCCCeEECCCCcHH-HHHHHHHhCCCcEEEEECCC-CcEEEEecHHHHHHHHhcCCCcccCcHHHHcCCCC
Confidence 58999999877889999999998 99999999999999999866 899999999999875432 2457888877888
Q ss_pred ceeCCCCCHHHHHHHHhhCCceEEEEEecCCCcccccchhhhhcc
Q 018729 282 PRVSEDMPLYDILNEFQKGHSHIAVVYKDLNEKKEGELFKDNCKK 326 (351)
Q Consensus 282 ~~V~~~~~l~~lL~~~~~~~~~~aiVvDe~g~~~GiVT~~Dil~~ 326 (351)
.++++++++.++++.|.+++.+.++|+|+. +++|+||..|++++
T Consensus 106 ~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~-~~~Giit~~dil~a 149 (149)
T 3k2v_A 106 IRIRPGTLAVDALNLMQSRHITCVLVADGD-HLLGVVHMHDLLRA 149 (149)
T ss_dssp CEECTTCBHHHHHHHHHHHTCSEEEEEETT-EEEEEEEHHHHTCC
T ss_pred eEECCCCCHHHHHHHHHHcCCCEEEEecCC-EEEEEEEHHHhhcC
Confidence 999999999999999999999999999985 99999999999863
No 29
>1yav_A Hypothetical protein BSU14130; cystathionine beta synthase (CBS) domain, structural genomics, protein structure initiative, PSI; 2.10A {Bacillus subtilis} SCOP: d.37.1.1
Probab=99.72 E-value=2.6e-18 Score=145.37 Aligned_cols=133 Identities=17% Similarity=0.206 Sum_probs=110.5
Q ss_pred cccccccccccccCcceEEEeCCCCccHHHHHHHHhcCCcEEeeEcCCCCceeEEeEhhhhcccccc---------cccc
Q 018729 202 ELTEKTAKDAMTPISKAFSLDLDATLTLDTLNAIMTMGHSRVPVYSGNPTNIIGLILVKNLLSVDYR---------DAVP 272 (351)
Q Consensus 202 ~l~~~~v~~iMtpr~~v~~v~~~~t~~~e~~~~~~~~~~sr~PV~~~~~d~ivGiv~~kdll~~~~~---------~~~~ 272 (351)
.+.+.+|+++|+|+.++.++++++++. ++++.+.+++++++||++++ ++++|+++.+|++..... ...+
T Consensus 10 ~l~~~~v~~im~~~~~~~~v~~~~~l~-~a~~~m~~~~~~~~pVvd~~-~~lvGivt~~dl~~~~~~~~~~~~~~~~~~~ 87 (159)
T 1yav_A 10 QLLEATVGQFMIEADKVAHVQVGNNLE-HALLVLTKTGYTAIPVLDPS-YRLHGLIGTNMIMNSIFGLERIEFEKLDQIT 87 (159)
T ss_dssp -CTTCBHHHHSEEGGGSCCEETTCBHH-HHHHHHHHHCCSEEEEECTT-CBEEEEEEHHHHHHHHBCSSSBCGGGTTTSB
T ss_pred HHhHhhHHHHhCCccceEEECCCCcHH-HHHHHHHhCCCcEEEEECCC-CCEEEEeEHHHHHHHhhhhcccchhhhccCC
Confidence 567899999999877889999999998 99999999999999999875 799999999999865322 2457
Q ss_pred ccccccccCceeCCCCCHHHHHHHHhhCCceEEEEEecCCCcccccchhhhhccccCCCCCCCCcc
Q 018729 273 LRKMIIRRIPRVSEDMPLYDILNEFQKGHSHIAVVYKDLNEKKEGELFKDNCKKPRGQPEKSSQKG 338 (351)
Q Consensus 273 l~~i~~~~~~~V~~~~~l~~lL~~~~~~~~~~aiVvDe~g~~~GiVT~~Dil~~l~~~~~~~~~~~ 338 (351)
+.++|.+++.++++++++.++++.|.+++. ++|+|++|+++|+||..|+++.+.+........+
T Consensus 88 v~~~m~~~~~~v~~~~~l~~a~~~m~~~~~--lpVvd~~g~~vGiit~~dil~~~~~~~~~~~~~~ 151 (159)
T 1yav_A 88 VEEVMLTDIPRLHINDPIMKGFGMVINNGF--VCVENDEQVFEGIFTRRVVLKELNKHIRSLNKEG 151 (159)
T ss_dssp HHHHSBCSCCEEETTSBHHHHHHHTTTCSE--EEEECTTCBEEEEEEHHHHHHHHHHHC-------
T ss_pred HHHhcCCCCceEcCCCCHHHHHHHHHhCCE--EEEEeCCCeEEEEEEHHHHHHHHHHHHHhhcccc
Confidence 888877788999999999999999998865 8899999999999999999998876655444433
No 30
>3sl7_A CBS domain-containing protein CBSX2; CBS-PAIR protein, redox regulator, plant CBS domain, thiored chloroplast, membrane protein; 1.91A {Arabidopsis thaliana}
Probab=99.72 E-value=4.9e-18 Score=146.01 Aligned_cols=123 Identities=15% Similarity=0.106 Sum_probs=109.0
Q ss_pred ccccccccccCcceEEEeCCCCccHHHHHHHHhcCCcEEeeEcCCCCceeEEeEhhhhcccc------------------
Q 018729 205 EKTAKDAMTPISKAFSLDLDATLTLDTLNAIMTMGHSRVPVYSGNPTNIIGLILVKNLLSVD------------------ 266 (351)
Q Consensus 205 ~~~v~~iMtpr~~v~~v~~~~t~~~e~~~~~~~~~~sr~PV~~~~~d~ivGiv~~kdll~~~------------------ 266 (351)
..+|+++|+|+.+++++++++++. ++++.+.+++++++||++++ ++++|+++.+|++...
T Consensus 3 ~~~v~dim~~~~~~~~v~~~~~l~-~a~~~m~~~~~~~~pVvd~~-~~~~Givt~~dl~~~~~~~~~~~~~~~~~~~~~~ 80 (180)
T 3sl7_A 3 GYTVGDFMTPRQNLHVVKPSTSVD-DALELLVEKKVTGLPVIDDN-WTLVGVVSDYDLLALDSISGRSQNDTNLFPDVDS 80 (180)
T ss_dssp CCBHHHHSEEGGGCCCBCTTSBHH-HHHHHHHHHTCSEEEEECTT-CBEEEEEEHHHHTCC-------------------
T ss_pred ceeHHHhcCCCCCceeeCCCCcHH-HHHHHHHHcCCCeEEEECCC-CeEEEEEEHHHHHhhhhhccccCCcccccccccc
Confidence 468999999988889999999998 99999999999999999876 8999999999998531
Q ss_pred -------------ccccccccccccccCceeCCCCCHHHHHHHHhhCCceEEEEEecCCCcccccchhhhhccccC
Q 018729 267 -------------YRDAVPLRKMIIRRIPRVSEDMPLYDILNEFQKGHSHIAVVYKDLNEKKEGELFKDNCKKPRG 329 (351)
Q Consensus 267 -------------~~~~~~l~~i~~~~~~~V~~~~~l~~lL~~~~~~~~~~aiVvDe~g~~~GiVT~~Dil~~l~~ 329 (351)
...+.++.++|.++++++++++++.++++.|.+++.+.++|+|++|+++|+||..|+++.+..
T Consensus 81 ~~~~~~~~~~~~~~~~~~~v~~~m~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~~vGiit~~dil~~~~~ 156 (180)
T 3sl7_A 81 TWKTFNELQKLISKTYGKVVGDLMTPSPLVVRDSTNLEDAARLLLETKFRRLPVVDADGKLIGILTRGNVVRAALQ 156 (180)
T ss_dssp CCCSHHHHHHHHHTTTTCBHHHHSEESCCCEETTSBHHHHHHHHTTSTTCEEEEECTTCBEEEEEEHHHHHHHHHH
T ss_pred hhhhhHHHHHHHhccccccHHHHhCCCceEeCCCCcHHHHHHHHHHcCCCEEEEECCCCeEEEEEEHHHHHHHHHH
Confidence 012356888877778999999999999999999999999999999999999999999988754
No 31
>2rih_A Conserved protein with 2 CBS domains; bateman domain, AMP binding protein, ligand-BIND protein; 2.10A {Pyrobaculum aerophilum} SCOP: d.37.1.1 PDB: 2rif_A
Probab=99.71 E-value=1.7e-17 Score=137.36 Aligned_cols=118 Identities=12% Similarity=0.112 Sum_probs=105.4
Q ss_pred cccccccccCcceEEEeCCCCccHHHHHHHHhcCCcEEeeEcCCCC--ceeEEeEhhhhcccccc---cccccccccccc
Q 018729 206 KTAKDAMTPISKAFSLDLDATLTLDTLNAIMTMGHSRVPVYSGNPT--NIIGLILVKNLLSVDYR---DAVPLRKMIIRR 280 (351)
Q Consensus 206 ~~v~~iMtpr~~v~~v~~~~t~~~e~~~~~~~~~~sr~PV~~~~~d--~ivGiv~~kdll~~~~~---~~~~l~~i~~~~ 280 (351)
.+|+++|++ ++.++++++++. ++++.+.+++++++||++++ + +++|+++.+|++....+ .+.++.++|.++
T Consensus 5 ~~v~~im~~--~~~~v~~~~~~~-~a~~~~~~~~~~~~~Vvd~~-~~~~~~Givt~~dl~~~~~~~~~~~~~v~~~m~~~ 80 (141)
T 2rih_A 5 IRTSELLKR--PPVSLPETATIR-EVATELAKNRVGLAVLTARD-NPKRPVAVVSERDILRAVAQRLDLDGPAMPIANSP 80 (141)
T ss_dssp CBGGGGCCS--CCEEEETTCBHH-HHHHHHHHHTCSEEEEEETT-EEEEEEEEEEHHHHHHHHHTTCCTTSBSGGGCBCC
T ss_pred eEHHHHhcC--CCeEeCCCCcHH-HHHHHHHHcCCCEEEEEcCC-CcceeEEEEEHHHHHHHHhcCCCCCCCHHHHcCCC
Confidence 689999986 678999999998 99999999999999999875 5 89999999999875322 246788987788
Q ss_pred CceeCCCCCHHHHHHHHhhCCceEEEEEecCCCcccccchhhhhcccc
Q 018729 281 IPRVSEDMPLYDILNEFQKGHSHIAVVYKDLNEKKEGELFKDNCKKPR 328 (351)
Q Consensus 281 ~~~V~~~~~l~~lL~~~~~~~~~~aiVvDe~g~~~GiVT~~Dil~~l~ 328 (351)
+++++++ ++.++++.|.+++.+.++|+|++|+++|+||..|+++.+.
T Consensus 81 ~~~v~~~-~l~~a~~~m~~~~~~~l~Vvd~~g~~~Giit~~dll~~~~ 127 (141)
T 2rih_A 81 ITVLDTD-PVHVAAEKMRRHNIRHVVVVNKNGELVGVLSIRDLCFERA 127 (141)
T ss_dssp CEEETTS-BHHHHHHHHHHHTCSEEEEECTTSCEEEEEEHHHHHSCHH
T ss_pred CeEEcCC-CHHHHHHHHHHcCCeEEEEEcCCCcEEEEEEHHHHHHHHH
Confidence 9999999 9999999999999999999999999999999999998754
No 32
>2rc3_A CBS domain; in SITU proteolysis, BR, structural genomics, PSI-2, protein structure initiative; HET: NAD; 1.60A {Nitrosomonas europaea atcc 19718} SCOP: d.37.1.1
Probab=99.71 E-value=9.5e-18 Score=137.79 Aligned_cols=122 Identities=10% Similarity=0.107 Sum_probs=106.8
Q ss_pred cc-ccccccccC-cceEEEeCCCCccHHHHHHHHhcCCcEEeeEcCCCCceeEEeEhhhhcc-cccc----ccccccccc
Q 018729 205 EK-TAKDAMTPI-SKAFSLDLDATLTLDTLNAIMTMGHSRVPVYSGNPTNIIGLILVKNLLS-VDYR----DAVPLRKMI 277 (351)
Q Consensus 205 ~~-~v~~iMtpr-~~v~~v~~~~t~~~e~~~~~~~~~~sr~PV~~~~~d~ivGiv~~kdll~-~~~~----~~~~l~~i~ 277 (351)
++ +|+++|+|+ .++.++++++++. ++++.+.+++++++||++ + ++++|+++.+|++. ...+ .+.++.++|
T Consensus 4 ~m~~v~~im~~~~~~~~~v~~~~~~~-~a~~~~~~~~~~~~~Vvd-~-~~~~Givt~~dl~~~~~~~~~~~~~~~v~~~m 80 (135)
T 2rc3_A 4 HMKTVKHLLQEKGHTVVAIGPDDSVF-NAMQKMAADNIGALLVMK-D-EKLVGILTERDFSRKSYLLDKPVKDTQVKEIM 80 (135)
T ss_dssp -CCBHHHHHHHHCCCCCEECTTSBHH-HHHHHHHHHTCSEEEEEE-T-TEEEEEEEHHHHHHHGGGSSSCGGGSBGGGTS
T ss_pred cceeHHHHHhcCCCCcEEECCCCcHH-HHHHHHHhcCCCEEEEEE-C-CEEEEEEehHHHHHHHHHcCCCcccCCHHHhc
Confidence 34 899999976 7889999999998 999999999999999997 4 79999999999985 2221 246788987
Q ss_pred cccCceeCCCCCHHHHHHHHhhCCceEEEEEecCCCcccccchhhhhccccCC
Q 018729 278 IRRIPRVSEDMPLYDILNEFQKGHSHIAVVYKDLNEKKEGELFKDNCKKPRGQ 330 (351)
Q Consensus 278 ~~~~~~V~~~~~l~~lL~~~~~~~~~~aiVvDe~g~~~GiVT~~Dil~~l~~~ 330 (351)
.+++.++++++++.++++.|.+++.+.++|+| +|+++|+||..|+++.+.++
T Consensus 81 ~~~~~~v~~~~~l~~~~~~m~~~~~~~lpVvd-~g~~~Giit~~dll~~~~~~ 132 (135)
T 2rc3_A 81 TRQVAYVDLNNTNEDCMALITEMRVRHLPVLD-DGKVIGLLSIGDLVKDAISQ 132 (135)
T ss_dssp BCSCCCBCTTCBHHHHHHHHHHHTCSEEEEEE-TTEEEEEEEHHHHHHHHHC-
T ss_pred cCCCeEECCCCcHHHHHHHHHHhCCCEEEEEe-CCEEEEEEEHHHHHHHHHhc
Confidence 78899999999999999999999999999999 69999999999999988654
No 33
>2p9m_A Hypothetical protein MJ0922; structural genomics, collaboratory for structural genomics, secsg; 2.59A {Methanocaldococcus jannaschii dsm 2661ORGANISM_TAXID}
Probab=99.70 E-value=1.7e-17 Score=136.55 Aligned_cols=123 Identities=12% Similarity=0.186 Sum_probs=107.3
Q ss_pred ccccccccccccCcceEEEeCCCCccHHHHHHHHhcCCcEEeeEcCCCCceeEEeEhhhh-cccccc---cccccccccc
Q 018729 203 LTEKTAKDAMTPISKAFSLDLDATLTLDTLNAIMTMGHSRVPVYSGNPTNIIGLILVKNL-LSVDYR---DAVPLRKMII 278 (351)
Q Consensus 203 l~~~~v~~iMtpr~~v~~v~~~~t~~~e~~~~~~~~~~sr~PV~~~~~d~ivGiv~~kdl-l~~~~~---~~~~l~~i~~ 278 (351)
+.+.+|+++|++ ++.++++++++. ++++.+.+++++++||++++ ++++|+++.+|+ +....+ .+.++.++|.
T Consensus 5 l~~~~v~~im~~--~~~~v~~~~~~~-~a~~~~~~~~~~~~~Vvd~~-~~~~Givt~~dl~~~~~~~~~~~~~~v~~~m~ 80 (138)
T 2p9m_A 5 LKNIKVKDVMTK--NVITAKRHEGVV-EAFEKMLKYKISSLPVIDDE-NKVIGIVTTTDIGYNLIRDKYTLETTIGDVMT 80 (138)
T ss_dssp CTTCBGGGTSBC--SCCCEETTSBHH-HHHHHHHHHTCCEEEEECTT-CBEEEEEEHHHHHHHHTTTCCCSSCBHHHHSC
T ss_pred cccCCHHHhhcC--CceEECCCCcHH-HHHHHHHHCCCcEEEEECCC-CeEEEEEEHHHHHHHHHhhcccCCcCHHHHhC
Confidence 567899999976 668899999998 99999999999999999875 899999999999 764322 2457888877
Q ss_pred ccCceeCCCCCHHHHHHHHhhCC-----ceEEEEEecCCCcccccchhhhhccccC
Q 018729 279 RRIPRVSEDMPLYDILNEFQKGH-----SHIAVVYKDLNEKKEGELFKDNCKKPRG 329 (351)
Q Consensus 279 ~~~~~V~~~~~l~~lL~~~~~~~-----~~~aiVvDe~g~~~GiVT~~Dil~~l~~ 329 (351)
+++.++++++++.++++.|.+++ .+.++|+|++|+++|++|..|+++.+.+
T Consensus 81 ~~~~~v~~~~~l~~~~~~~~~~~~~~~~~~~l~Vvd~~g~~~Giit~~dll~~~~~ 136 (138)
T 2p9m_A 81 KDVITIHEDASILEAIKKMDISGKKEEIINQLPVVDKNNKLVGIISDGDIIRTISK 136 (138)
T ss_dssp SSCCCEETTSBHHHHHHHHTCC-----CCCEEEEECTTSBEEEEEEHHHHHHHHHH
T ss_pred CCcEEECCCCCHHHHHHHHHhcCCccccccEEEEECCCCeEEEEEEHHHHHHHHHh
Confidence 78899999999999999999999 9999999999999999999999987654
No 34
>3t4n_C Nuclear protein SNF4; CBS domain, nucleotide binding, cytosol, protein binding; HET: ADP; 2.30A {Saccharomyces cerevisiae} PDB: 3tdh_C* 3te5_C* 2qlv_C
Probab=99.70 E-value=4.1e-18 Score=160.39 Aligned_cols=143 Identities=12% Similarity=0.137 Sum_probs=121.6
Q ss_pred cCCCCCHHHHHHHHhhhcc-cccccccccccCcceEEEeCCCCccHHHHHHHHhcCCcEEeeEcCCCCceeEEeEhhhhc
Q 018729 185 KGGDLTHDETTIIAGALEL-TEKTAKDAMTPISKAFSLDLDATLTLDTLNAIMTMGHSRVPVYSGNPTNIIGLILVKNLL 263 (351)
Q Consensus 185 ~~g~l~~~e~~~i~~vl~l-~~~~v~~iMtpr~~v~~v~~~~t~~~e~~~~~~~~~~sr~PV~~~~~d~ivGiv~~kdll 263 (351)
+.|.++++|+++++++++| .+.+++|+|+|+.++++++.++++. ++++.+.+++++++||++++.++++|+++.+|++
T Consensus 8 ~~~~~~~~~~~~~~~i~~~l~~~~~~d~m~~~~~~v~v~~~~sv~-~a~~~m~~~~~~~~pV~d~~~~~lvGilt~~Dl~ 86 (323)
T 3t4n_C 8 SQEKVSIEQQLAVESIRKFLNSKTSYDVLPVSYRLIVLDTSLLVK-KSLNVLLQNSIVSAPLWDSKTSRFAGLLTTTDFI 86 (323)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHSBHHHHSCSEEEEEEEETTSBHH-HHHHHHHHTTCSCEEEEETTTTEEEEEECHHHHH
T ss_pred CCCcccHHHHHHHHHHHHHHHhCchHhhCCCCCcEEEEcCCCcHH-HHHHHHHHcCCceEEEEeCCCCeEEEEEEHHHHH
Confidence 4567889999999999999 9999999999999999999999998 9999999999999999998767999999999987
Q ss_pred cccc----cc----------ccccccc------ccccCceeCCCCCHHHHHHHHhhCCceEEEEEecCCC-----ccccc
Q 018729 264 SVDY----RD----------AVPLRKM------IIRRIPRVSEDMPLYDILNEFQKGHSHIAVVYKDLNE-----KKEGE 318 (351)
Q Consensus 264 ~~~~----~~----------~~~l~~i------~~~~~~~V~~~~~l~~lL~~~~~~~~~~aiVvDe~g~-----~~GiV 318 (351)
.... .. ...+.++ +.+++.++++++++.++++.|.+++.+.++|+|++|+ ++|++
T Consensus 87 ~~l~~~~~~~~~~~~l~~~~~~~v~~i~~~~~~~~~~~v~v~~~~~l~~a~~~m~~~~~~~lpVvd~~~~~~~~~l~Giv 166 (323)
T 3t4n_C 87 NVIQYYFSNPDKFELVDKLQLDGLKDIERALGVDQLDTASIHPSRPLFEACLKMLESRSGRIPLIDQDEETHREIVVSVL 166 (323)
T ss_dssp HHHHHHHHCGGGGGGGGGCBHHHHHHHHHHTTC----CCCBCTTSBHHHHHHHHHHHTCSEEEEEEECTTTCCEEEEEEE
T ss_pred HHHHHHHcCcchhHHHHHHHHHHHHHHHHHhCCCCCCceEeCCCCcHHHHHHHHHhCCeeEEEEEecCCCCCccceEEEe
Confidence 6421 00 0112222 2477889999999999999999999999999999887 99999
Q ss_pred chhhhhcccc
Q 018729 319 LFKDNCKKPR 328 (351)
Q Consensus 319 T~~Dil~~l~ 328 (351)
|..|+++.+.
T Consensus 167 t~~di~~~l~ 176 (323)
T 3t4n_C 167 TQYRILKFVA 176 (323)
T ss_dssp EHHHHHHHHH
T ss_pred cHHHHHHHHH
Confidence 9999997654
No 35
>1pvm_A Conserved hypothetical protein TA0289; structural genomics, CBS domain, PSI, protein structure initiative; 1.50A {Thermoplasma acidophilum dsm 1728} SCOP: d.37.1.1 g.41.13.1 PDB: 2qh1_A
Probab=99.69 E-value=4.6e-17 Score=141.28 Aligned_cols=120 Identities=17% Similarity=0.197 Sum_probs=107.7
Q ss_pred cccccccccCcceEEEeCCCCccHHHHHHHHhcCCcEEeeEcCCCCceeEEeEhhhhccccc-----ccccccccccccc
Q 018729 206 KTAKDAMTPISKAFSLDLDATLTLDTLNAIMTMGHSRVPVYSGNPTNIIGLILVKNLLSVDY-----RDAVPLRKMIIRR 280 (351)
Q Consensus 206 ~~v~~iMtpr~~v~~v~~~~t~~~e~~~~~~~~~~sr~PV~~~~~d~ivGiv~~kdll~~~~-----~~~~~l~~i~~~~ 280 (351)
.+|+++|++ ++++++.++++. ++++.+.+++++++||++++ ++++|+++.+|++.... ....++.++|.++
T Consensus 9 ~~v~~im~~--~~~~v~~~~~l~-ea~~~~~~~~~~~~pVvd~~-g~~vGivt~~dl~~~~~~~~~~~~~~~v~~im~~~ 84 (184)
T 1pvm_A 9 MRVEKIMNS--NFKTVNWNTTVF-DAVKIMNENHLYGLVVKDDN-GNDVGLLSERSIIKRFIPRNKKPDEVPIRLVMRKP 84 (184)
T ss_dssp CBGGGTSBT--TCCEEETTCBHH-HHHHHHHHHTCCEEEEECTT-SCEEEEEEHHHHHHHTGGGCCCGGGSBGGGTSBSS
T ss_pred cCHHHhcCC--CCeEECCCCcHH-HHHHHHHHcCCCEEEEEcCC-CcEEEEEeHHHHHHHHhhcccCcccCCHHHHhCCC
Confidence 789999975 678999999998 99999999999999999865 89999999999987532 1245788887778
Q ss_pred CceeCCCCCHHHHHHHHhhCCceEEEEEecCCCcccccchhhhhccccC
Q 018729 281 IPRVSEDMPLYDILNEFQKGHSHIAVVYKDLNEKKEGELFKDNCKKPRG 329 (351)
Q Consensus 281 ~~~V~~~~~l~~lL~~~~~~~~~~aiVvDe~g~~~GiVT~~Dil~~l~~ 329 (351)
+.++++++++.++++.|.+++.+.++|+|++|+++|+||..|+++.+.+
T Consensus 85 ~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~~~Givt~~dll~~~~~ 133 (184)
T 1pvm_A 85 IPKVKSDYDVKDVAAYLSENGLERCAVVDDPGRVVGIVTLTDLSRYLSR 133 (184)
T ss_dssp CCEEETTCBHHHHHHHHHHHTCSEEEEECTTCCEEEEEEHHHHTTTSCH
T ss_pred CcEECCCCCHHHHHHHHHHcCCcEEEEEcCCCeEEEEEEHHHHHHHHHh
Confidence 8999999999999999999999999999999999999999999998765
No 36
>4fry_A Putative signal-transduction protein with CBS DOM; CBS domain,ssgcid, structural genomics, niaid; HET: NAD AMP; 2.10A {Burkholderia ambifaria}
Probab=99.68 E-value=3e-17 Score=138.39 Aligned_cols=128 Identities=9% Similarity=0.077 Sum_probs=111.4
Q ss_pred cccccccccC----cceEEEeCCCCccHHHHHHHHhcCCcEEeeEcCCCCceeEEeEhhhhcccccc-----cccccccc
Q 018729 206 KTAKDAMTPI----SKAFSLDLDATLTLDTLNAIMTMGHSRVPVYSGNPTNIIGLILVKNLLSVDYR-----DAVPLRKM 276 (351)
Q Consensus 206 ~~v~~iMtpr----~~v~~v~~~~t~~~e~~~~~~~~~~sr~PV~~~~~d~ivGiv~~kdll~~~~~-----~~~~l~~i 276 (351)
.+|+|+|+|+ .++.++++++++. ++++.+.+++++++||.+ .++++|+++.+|++..... .+.++.++
T Consensus 7 ~~v~dim~~~~~~~~~~~~v~~~~~~~-~a~~~~~~~~~~~~~V~~--~~~~~Givt~~dl~~~~~~~~~~~~~~~v~~~ 83 (157)
T 4fry_A 7 TTVAQILKAKPDSGRTIYTVTKNDFVY-DAIKLMAEKGIGALLVVD--GDDIAGIVTERDYARKVVLQERSSKATRVEEI 83 (157)
T ss_dssp CBHHHHHHHSTTTTCCCCEEETTSBHH-HHHHHHHHHTCSEEEEES--SSSEEEEEEHHHHHHHSGGGTCCSSSCBHHHH
T ss_pred HHHHHHHhcccccCCCCeEECCCCcHH-HHHHHHHHcCCCEEEEee--CCEEEEEEEHHHHHHHHHhccCCccccCHHHH
Confidence 5799999988 7889999999998 999999999999999954 3899999999999865321 24678888
Q ss_pred ccccCceeCCCCCHHHHHHHHhhCCceEEEEEecCCCcccccchhhhhccccCCCCCCCCc
Q 018729 277 IIRRIPRVSEDMPLYDILNEFQKGHSHIAVVYKDLNEKKEGELFKDNCKKPRGQPEKSSQK 337 (351)
Q Consensus 277 ~~~~~~~V~~~~~l~~lL~~~~~~~~~~aiVvDe~g~~~GiVT~~Dil~~l~~~~~~~~~~ 337 (351)
|.+++.++++++++.++++.|.+++.+.++|+| +|+++|+||..|+++.+.++......+
T Consensus 84 m~~~~~~v~~~~~l~~~~~~m~~~~~~~lpVvd-~g~~~Giit~~dil~~l~~~~~~~~~~ 143 (157)
T 4fry_A 84 MTAKVRYVEPSQSTDECMALMTEHRMRHLPVLD-GGKLIGLISIGDLVKSVIADQQFTISQ 143 (157)
T ss_dssp SBSSCCCBCTTSBHHHHHHHHHHHTCSEEEEEE-TTEEEEEEEHHHHHHHHHTTCCCCCC-
T ss_pred cCCCCcEECCCCcHHHHHHHHHHcCCCEEEEEE-CCEEEEEEEHHHHHHHHHHHHHhhHHH
Confidence 778889999999999999999999999999999 699999999999999998776655443
No 37
>3org_A CMCLC; transporter, transport protein; 3.50A {Cyanidioschyzon merolae}
Probab=99.68 E-value=2e-17 Score=170.02 Aligned_cols=126 Identities=16% Similarity=0.001 Sum_probs=108.7
Q ss_pred cccccccccccCcceEEEeCCCCccHHHHHHHH-hcCCcEEeeEcCCCCceeEEeEhhhhccccccc----c--------
Q 018729 204 TEKTAKDAMTPISKAFSLDLDATLTLDTLNAIM-TMGHSRVPVYSGNPTNIIGLILVKNLLSVDYRD----A-------- 270 (351)
Q Consensus 204 ~~~~v~~iMtpr~~v~~v~~~~t~~~e~~~~~~-~~~~sr~PV~~~~~d~ivGiv~~kdll~~~~~~----~-------- 270 (351)
++++|+|+|+||+++.+++++++++ |+.+.+. +++++++||+|++ ++++|+|+.+|+++...+. +
T Consensus 451 ~~~~V~diM~p~~~v~~v~~~~t~~-e~~~~~~~~~~~~~~PVvd~~-~~lvGiVt~~DL~~~l~~~~~~~~~~~~~~~~ 528 (632)
T 3org_A 451 PEMTAREIMHPIEGEPHLFPDSEPQ-HIKGILEKFPNRLVFPVIDAN-GYLLGAISRKEIVDRLQHVLEDVPEPIAGHRT 528 (632)
T ss_dssp TTSBHHHHCBCTTTSCCBCSSSCHH-HHHHHHHHSTTCCEECBBCTT-CBBCCEESHHHHTTTTTTC-------------
T ss_pred ccCcHHHHhhcCCCceEecCCCcHH-HHHHHHHhcCCcceEEEEecC-CeEEEEEEHHHHHHHHHHHhhhcccccccccc
Confidence 6789999999999999999999998 9999999 8999999999875 8999999999998753221 0
Q ss_pred ---------------------------------------ccccccccccCceeCCCCCHHHHHHHHhhCCceEEEEEecC
Q 018729 271 ---------------------------------------VPLRKMIIRRIPRVSEDMPLYDILNEFQKGHSHIAVVYKDL 311 (351)
Q Consensus 271 ---------------------------------------~~l~~i~~~~~~~V~~~~~l~~lL~~~~~~~~~~aiVvDe~ 311 (351)
.++.++|.+++.+|++++++.++++.|++++.+.++|+ |+
T Consensus 529 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~v~~iMt~~pitV~~~~~l~ea~~~M~~~~i~~lpVv-e~ 607 (632)
T 3org_A 529 LVLLDAADLSENIEGLVDETPSGEHSSKGKRTATVLEPTSSLVVPCDVSPIVVTSYSLVRQLHFLFVMLMPSMIYVT-ER 607 (632)
T ss_dssp ------------------------------------------CCSCCCCCCEEETTCBHHHHHHHHHHTCCSEEEEE-ET
T ss_pred eeccCHHHHHhhcccCCCCCcccchhhhcccceEeeccccccchhhcCCCceecCCCcHHHHHHHHHhcCCCEEEEE-EC
Confidence 02567788899999999999999999999999999999 78
Q ss_pred CCcccccchhhhhccccCCCC
Q 018729 312 NEKKEGELFKDNCKKPRGQPE 332 (351)
Q Consensus 312 g~~~GiVT~~Dil~~l~~~~~ 332 (351)
|+++|+||++|+++.+..+.+
T Consensus 608 G~lvGIVT~~Dll~~~~~~~~ 628 (632)
T 3org_A 608 GKLVGIVEREDVAYGYSNSLE 628 (632)
T ss_dssp TEEEEEEEGGGTEECCCC---
T ss_pred CEEEEEEehhhHHHHHhhhHH
Confidence 999999999999998876543
No 38
>1y5h_A Hypothetical protein RV2626C; CBS domain, unknown function; 1.50A {Mycobacterium tuberculosis} SCOP: d.37.1.1 PDB: 1xkf_A
Probab=99.68 E-value=3e-17 Score=134.26 Aligned_cols=123 Identities=13% Similarity=0.148 Sum_probs=105.0
Q ss_pred ccccccccccccCcceEEEeCCCCccHHHHHHHHhcCCcEEeeEcCCCCceeEEeEhhhhc-ccccc----ccccccccc
Q 018729 203 LTEKTAKDAMTPISKAFSLDLDATLTLDTLNAIMTMGHSRVPVYSGNPTNIIGLILVKNLL-SVDYR----DAVPLRKMI 277 (351)
Q Consensus 203 l~~~~v~~iMtpr~~v~~v~~~~t~~~e~~~~~~~~~~sr~PV~~~~~d~ivGiv~~kdll-~~~~~----~~~~l~~i~ 277 (351)
+.-.+|+++|++ ++.++++++++. ++++.+.+++++++||++++ ++++|+++.+|++ ..... .+.++.++|
T Consensus 5 ~~~~~v~~im~~--~~~~v~~~~~~~-~a~~~~~~~~~~~~~Vvd~~-~~~~Givt~~dl~~~~~~~~~~~~~~~v~~~m 80 (133)
T 1y5h_A 5 FTMTTARDIMNA--GVTCVGEHETLT-AAAQYMREHDIGALPICGDD-DRLHGMLTDRDIVIKGLAAGLDPNTATAGELA 80 (133)
T ss_dssp ---CCHHHHSEE--TCCCEETTSBHH-HHHHHHHHHTCSEEEEECGG-GBEEEEEEHHHHHHTTGGGTCCTTTSBHHHHH
T ss_pred hhhcCHHHHhcC--CceEeCCCCCHH-HHHHHHHHhCCCeEEEECCC-CeEEEEEeHHHHHHHHHhcCCCccccCHHHHh
Confidence 344689999986 668899999998 99999999999999999765 8999999999998 34322 235788887
Q ss_pred cccCceeCCCCCHHHHHHHHhhCCceEEEEEecCCCcccccchhhhhccccCC
Q 018729 278 IRRIPRVSEDMPLYDILNEFQKGHSHIAVVYKDLNEKKEGELFKDNCKKPRGQ 330 (351)
Q Consensus 278 ~~~~~~V~~~~~l~~lL~~~~~~~~~~aiVvDe~g~~~GiVT~~Dil~~l~~~ 330 (351)
.++++++++++++.++++.|.+++.+.++|+|+ |+++|++|..|+++.+.++
T Consensus 81 ~~~~~~v~~~~~l~~~~~~m~~~~~~~l~Vvd~-g~~~Giit~~dil~~l~~~ 132 (133)
T 1y5h_A 81 RDSIYYVDANASIQEMLNVMEEHQVRRVPVISE-HRLVGIVTEADIARHLPEH 132 (133)
T ss_dssp TTCCCCEETTCCHHHHHHHHHHHTCSEEEEEET-TEEEEEEEHHHHHHTCC--
T ss_pred cCCCEEECCCCCHHHHHHHHHHcCCCEEEEEEC-CEEEEEEEHHHHHHHHHhc
Confidence 788999999999999999999999999999998 9999999999999988654
No 39
>3fv6_A YQZB protein; CBS domain dimer, metabolism regulator, central glycolytic G regulator, transcription; 1.95A {Bacillus subtilis} PDB: 3fwr_A* 3fws_A*
Probab=99.68 E-value=4.9e-17 Score=137.71 Aligned_cols=122 Identities=16% Similarity=0.184 Sum_probs=107.2
Q ss_pred ccccccccccccCcceEEEeCCCCccHHHHHHHHhcCCcEEeeEcCCCCceeEEeEhhhhccccc----ccccccccccc
Q 018729 203 LTEKTAKDAMTPISKAFSLDLDATLTLDTLNAIMTMGHSRVPVYSGNPTNIIGLILVKNLLSVDY----RDAVPLRKMII 278 (351)
Q Consensus 203 l~~~~v~~iMtpr~~v~~v~~~~t~~~e~~~~~~~~~~sr~PV~~~~~d~ivGiv~~kdll~~~~----~~~~~l~~i~~ 278 (351)
+.+++|+++|++ . +++++++++. ++++.+.+++++++||++++ ++++|+++.+|++.... ....++.++|.
T Consensus 14 l~~~~v~~im~~--~-~~v~~~~~~~-~a~~~m~~~~~~~~~Vvd~~-~~~~Givt~~dl~~~~~~~~~~~~~~v~~~m~ 88 (159)
T 3fv6_A 14 LKKLQVKDFQSI--P-VVIHENVSVY-DAICTMFLEDVGTLFVVDRD-AVLVGVLSRKDLLRASIGQQELTSVPVHIIMT 88 (159)
T ss_dssp HTTCBGGGSCBC--C-CEEETTSBHH-HHHHHHHHHTCSEEEEECTT-SCEEEEEEHHHHHHHHTSCSCTTTCBGGGTSE
T ss_pred HhhCCHHHHcCC--C-EEECCCCcHH-HHHHHHHHCCCCEEEEEcCC-CcEEEEEeHHHHHHHhhccCcccCcCHHHHHc
Confidence 457899999985 3 4899999998 99999999999999999865 89999999999987531 12467889866
Q ss_pred c--cCceeCCCCCHHHHHHHHhhCCceEEEEEecCC---CcccccchhhhhccccC
Q 018729 279 R--RIPRVSEDMPLYDILNEFQKGHSHIAVVYKDLN---EKKEGELFKDNCKKPRG 329 (351)
Q Consensus 279 ~--~~~~V~~~~~l~~lL~~~~~~~~~~aiVvDe~g---~~~GiVT~~Dil~~l~~ 329 (351)
+ ++.++++++++.++++.|.+++.+.++|+|++| +++|+||..|+++.+..
T Consensus 89 ~~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~~~~~vGiit~~dil~~l~~ 144 (159)
T 3fv6_A 89 RMPNITVCRREDYVMDIAKHLIEKQIDALPVIKDTDKGFEVIGRVTKTNMTKILVS 144 (159)
T ss_dssp ETTSCCCBCTTSBHHHHHHHHHHHTCSEEEEEEECSSSEEEEEEEEHHHHHHHHHH
T ss_pred CCCCcEEECCCCCHHHHHHHHHHcCCcEEEEEeCCCcceeEEEEEEHHHHHHHHHH
Confidence 6 788999999999999999999999999999988 99999999999987654
No 40
>1pbj_A Hypothetical protein; structural genomics, domain, PSI, protein structure initiative; 1.40A {Methanothermobacter thermautotrophicusdelta H} SCOP: d.37.1.1
Probab=99.67 E-value=4.6e-17 Score=131.45 Aligned_cols=118 Identities=15% Similarity=0.159 Sum_probs=103.9
Q ss_pred cccccccccCcceEEEeCCCCccHHHHHHHHhcCCcEEeeEcCCCCceeEEeEhhhhcccccc----ccccccccccccC
Q 018729 206 KTAKDAMTPISKAFSLDLDATLTLDTLNAIMTMGHSRVPVYSGNPTNIIGLILVKNLLSVDYR----DAVPLRKMIIRRI 281 (351)
Q Consensus 206 ~~v~~iMtpr~~v~~v~~~~t~~~e~~~~~~~~~~sr~PV~~~~~d~ivGiv~~kdll~~~~~----~~~~l~~i~~~~~ 281 (351)
++|+++|++ ++.++++++++. ++++.+.+++++++||++ + ++++|+++.+|++....+ .+.++.++|.+++
T Consensus 1 m~v~~~m~~--~~~~v~~~~~~~-~a~~~~~~~~~~~~~Vvd-~-~~~~G~it~~dl~~~~~~~~~~~~~~v~~~m~~~~ 75 (125)
T 1pbj_A 1 MRVEDVMVT--DVDTIDITASLE-DVLRNYVENAKGSSVVVK-E-GVRVGIVTTWDVLEAIAEGDDLAEVKVWEVMERDL 75 (125)
T ss_dssp -CHHHHCBC--SCCEEETTCBHH-HHHHHHHHHCCCEEEEEE-T-TEEEEEEEHHHHHHHHHHTCCTTTSBHHHHCBCGG
T ss_pred CCHHHhcCC--CceEECCCCcHH-HHHHHHHHcCCCEEEEEe-C-CeeEEEEeHHHHHHHHhcCCcccccCHHHHcCCCC
Confidence 468999986 678899999998 999999999999999998 4 899999999999865322 2457888877889
Q ss_pred ceeCCCCCHHHHHHHHhhCCceEEEEEecCCCcccccchhhhhccccC
Q 018729 282 PRVSEDMPLYDILNEFQKGHSHIAVVYKDLNEKKEGELFKDNCKKPRG 329 (351)
Q Consensus 282 ~~V~~~~~l~~lL~~~~~~~~~~aiVvDe~g~~~GiVT~~Dil~~l~~ 329 (351)
.++++++++.++++.|.+++.+.++|+|+ |+++|++|..|+++.+.+
T Consensus 76 ~~v~~~~~l~~~~~~~~~~~~~~l~Vvd~-~~~~Gvit~~dl~~~l~~ 122 (125)
T 1pbj_A 76 VTISPRATIKEAAEKMVKNVVWRLLVEED-DEIIGVISATDILRAKMA 122 (125)
T ss_dssp GEECTTSCHHHHHHHHHHHTCSEEEEEET-TEEEEEEEHHHHHHHHC-
T ss_pred eEECCCCCHHHHHHHHHhcCCcEEEEEEC-CEEEEEEEHHHHHHHHHh
Confidence 99999999999999999999999999999 999999999999998764
No 41
>4fxs_A Inosine-5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.24A {Vibrio cholerae o1 biovar el tor}
Probab=99.67 E-value=2.8e-17 Score=163.95 Aligned_cols=150 Identities=16% Similarity=0.194 Sum_probs=113.7
Q ss_pred ccccHHHHHHHHHhcccccccCCCC-----CHHHHHHHHhhhcccccccccccccCcceEEEeCCCCccHHHHHHHHhcC
Q 018729 165 VLLRRAELKTFVNFHGNEAGKGGDL-----THDETTIIAGALELTEKTAKDAMTPISKAFSLDLDATLTLDTLNAIMTMG 239 (351)
Q Consensus 165 ~~~t~eEl~~lv~~~~~e~~~~g~l-----~~~e~~~i~~vl~l~~~~v~~iMtpr~~v~~v~~~~t~~~e~~~~~~~~~ 239 (351)
..+|++|+...+... +.-|.| .++|+++++++ ++++++|++ +++++++++++. ++++.+.+++
T Consensus 52 dtVTe~~ma~a~a~~----GGiGvI~~n~s~e~qa~~V~~V-----k~~~~~m~~--d~v~v~~~~tv~-ea~~~m~~~~ 119 (496)
T 4fxs_A 52 DTVTEARLAIALAQE----GGIGFIHKNMSIEQQAAQVHQV-----KIFEAGVVT--HPVTVRPEQTIA-DVMELTHYHG 119 (496)
T ss_dssp TTTCSHHHHHHHHHH----TCEEEECSSSCHHHHHHHHHHH-----HHCCC--CB--CCCCBCSSSBHH-HHHHHHTSSC
T ss_pred chhhHHHHHHHHHHc----CCcceecCCCCHHHHHHHHHhc-----ccccccccc--CceEECCCCCHH-HHHHHHHHcC
Confidence 357899998887632 223445 66788999998 456889985 678999999998 9999999999
Q ss_pred CcEEeeEcCCCCceeEEeEhhhhcccccccccccccccc-c-cCceeCCCCCHHHHHHHHhhCCceEEEEEecCCCcccc
Q 018729 240 HSRVPVYSGNPTNIIGLILVKNLLSVDYRDAVPLRKMII-R-RIPRVSEDMPLYDILNEFQKGHSHIAVVYKDLNEKKEG 317 (351)
Q Consensus 240 ~sr~PV~~~~~d~ivGiv~~kdll~~~~~~~~~l~~i~~-~-~~~~V~~~~~l~~lL~~~~~~~~~~aiVvDe~g~~~Gi 317 (351)
|+++||++++ ++++|+|+.+|+... .+.+.++.++|. + +++++++++++.++++.|++++.+.++||||+|+++|+
T Consensus 120 ~s~~PVvd~~-~~lvGiVt~rDL~~~-~~~~~~v~diM~p~~~~vtv~~~~~l~ea~~~m~~~~i~~lpVVDe~G~l~Gi 197 (496)
T 4fxs_A 120 FAGFPVVTEN-NELVGIITGRDVRFV-TDLTKSVAAVMTPKERLATVKEGATGAEVQEKMHKARVEKILVVNDEFQLKGM 197 (496)
T ss_dssp CCEEEEECSS-SBEEEEEEHHHHTTC-CCTTSBGGGTSEEGGGCCEEECC----CGGGTCC---CCCEEEECTTSBCCEE
T ss_pred CcEEEEEccC-CEEEEEEEHHHHhhc-ccCCCcHHHHhcCCCCCEEECCCCCHHHHHHHHHHcCCCEEEEEcCCCCEEEe
Confidence 9999999875 899999999999743 234568899854 3 68999999999999999999999999999999999999
Q ss_pred cchhhhhcccc
Q 018729 318 ELFKDNCKKPR 328 (351)
Q Consensus 318 VT~~Dil~~l~ 328 (351)
||++|+++...
T Consensus 198 IT~~DIl~~~~ 208 (496)
T 4fxs_A 198 ITAKDFHKAES 208 (496)
T ss_dssp ECCC-----CC
T ss_pred ehHhHHHHhhc
Confidence 99999998754
No 42
>1o50_A CBS domain-containing predicted protein TM0935; CBS-domain PAIR fold, structural genomics, joint center for structural genomics, JCSG; 1.87A {Thermotoga maritima} SCOP: d.37.1.1
Probab=99.67 E-value=5.1e-17 Score=137.21 Aligned_cols=124 Identities=18% Similarity=0.134 Sum_probs=108.2
Q ss_pred cccccccccccccCcceEEEeCCCCccHHHHHHHHhcCCcE-EeeEcCCCCceeEEeEhhhhccccc-------------
Q 018729 202 ELTEKTAKDAMTPISKAFSLDLDATLTLDTLNAIMTMGHSR-VPVYSGNPTNIIGLILVKNLLSVDY------------- 267 (351)
Q Consensus 202 ~l~~~~v~~iMtpr~~v~~v~~~~t~~~e~~~~~~~~~~sr-~PV~~~~~d~ivGiv~~kdll~~~~------------- 267 (351)
.+.+.+|+++|++ ++.++++++++. ++++.+.++++++ +||++++ +++|+++.+|++....
T Consensus 12 ~~~~~~v~~im~~--~~~~v~~~~tl~-ea~~~m~~~~~~~~~~Vvd~~--~~vGivt~~dl~~~~~~~~~~~~~~~~~~ 86 (157)
T 1o50_A 12 HMKVKDVCKLISL--KPTVVEEDTPIE-EIVDRILEDPVTRTVYVARDN--KLVGMIPVMHLLKVSGFHFFGFIPKEELI 86 (157)
T ss_dssp TCBHHHHTTSSCC--CCEEECTTCBHH-HHHHHHHHSTTCCEEEEEETT--EEEEEEEHHHHHHHHHHHHHCCCC-----
T ss_pred hhccccHhhcccC--CCceECCCCCHH-HHHHHHHhCCCCccEEEEECC--EEEEEEEHHHHHHHHhhhHHhhhccHHHH
Confidence 3567889999976 678999999998 9999999999999 9999864 8999999999986421
Q ss_pred ------cccccccccccccCceeCCCCCHHHHHHHHhhCCceEEEEEecCCCcccccchhhhhccccCCC
Q 018729 268 ------RDAVPLRKMIIRRIPRVSEDMPLYDILNEFQKGHSHIAVVYKDLNEKKEGELFKDNCKKPRGQP 331 (351)
Q Consensus 268 ------~~~~~l~~i~~~~~~~V~~~~~l~~lL~~~~~~~~~~aiVvDe~g~~~GiVT~~Dil~~l~~~~ 331 (351)
..+.++.++|.+ ++++++++++.++++.|.+++.+.++|+|++|+++|+||..|+++.+.+..
T Consensus 87 ~~~~~~~~~~~v~~im~~-~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~~vGiit~~dll~~l~~~~ 155 (157)
T 1o50_A 87 RSSMKRLIAKNASEIMLD-PVYVHMDTPLEEALKLMIDNNIQEMPVVDEKGEIVGDLNSLEILLALWKGR 155 (157)
T ss_dssp --CCCCCSSCBHHHHCBC-CCCBCTTSBHHHHHHHHHHHTCSEEEEECTTSCEEEEEEHHHHHHHHHHSC
T ss_pred HHHHHHHcCCcHHHHcCC-CeEECCCCCHHHHHHHHHHCCCcEEEEEcCCCEEEEEEEHHHHHHHHHHhh
Confidence 124578888666 889999999999999999999999999999999999999999999876543
No 43
>2nyc_A Nuclear protein SNF4; bateman2 domain, AMP kinase, protein binding; 1.90A {Saccharomyces cerevisiae} SCOP: d.37.1.1 PDB: 2nye_A
Probab=99.66 E-value=4.5e-17 Score=134.70 Aligned_cols=123 Identities=15% Similarity=0.144 Sum_probs=104.9
Q ss_pred cccccccc---ccccCcceEEEeCCCCccHHHHHHHHhcCCcEEeeEcCCCCceeEEeEhhhhcccccc-----cccccc
Q 018729 203 LTEKTAKD---AMTPISKAFSLDLDATLTLDTLNAIMTMGHSRVPVYSGNPTNIIGLILVKNLLSVDYR-----DAVPLR 274 (351)
Q Consensus 203 l~~~~v~~---iMtpr~~v~~v~~~~t~~~e~~~~~~~~~~sr~PV~~~~~d~ivGiv~~kdll~~~~~-----~~~~l~ 274 (351)
+-+.++++ +|++ ++.++++++++. ++++.+.+++++++||++++ ++++|+++.+|++..... .+.++.
T Consensus 5 ~~~~~v~~~~~~~~~--~~~~v~~~~~~~-~a~~~~~~~~~~~~~Vvd~~-~~~~Givt~~dl~~~~~~~~~~~~~~~v~ 80 (144)
T 2nyc_A 5 FLKIPIGDLNIITQD--NMKSCQMTTPVI-DVIQMLTQGRVSSVPIIDEN-GYLINVYEAYDVLGLIKGGIYNDLSLSVG 80 (144)
T ss_dssp GGGSBGGGSSCCBCS--SCCCBCTTSBHH-HHHHHHHHHTCSEEEEECTT-CBEEEEEEHHHHHHHHHTC----CCSBHH
T ss_pred hhhcchhhcCCCCCC--CceEECCCCcHH-HHHHHHHHcCcceeeEEcCC-CcEEEEEcHHHHHHHhcccccccCCccHH
Confidence 45678888 7764 678899999998 99999999999999999875 899999999999865432 135677
Q ss_pred ccccc------cCceeCCCCCHHHHHHHHhhCCceEEEEEecCCCcccccchhhhhccccC
Q 018729 275 KMIIR------RIPRVSEDMPLYDILNEFQKGHSHIAVVYKDLNEKKEGELFKDNCKKPRG 329 (351)
Q Consensus 275 ~i~~~------~~~~V~~~~~l~~lL~~~~~~~~~~aiVvDe~g~~~GiVT~~Dil~~l~~ 329 (351)
++|.+ ++.++++++++.++++.|.+++.+.++|+|++|+++|+||..|+++.+.+
T Consensus 81 ~~m~~~~~~~~~~~~v~~~~~l~~~~~~m~~~~~~~l~Vvd~~g~~~Giit~~dil~~l~~ 141 (144)
T 2nyc_A 81 EALMRRSDDFEGVYTCTKNDKLSTIMDNIRKARVHRFFVVDDVGRLVGVLTLSDILKYILL 141 (144)
T ss_dssp HHHHHCC------CEECTTSBHHHHHHHHHHHTCSEEEEECTTSBEEEEEEHHHHHHHHHH
T ss_pred HHHhcCccccCCCeEECCCCcHHHHHHHHHHCCCCEEEEECCCCCEEEEEEHHHHHHHHHh
Confidence 87555 67899999999999999999999999999999999999999999998754
No 44
>2j9l_A Chloride channel protein 5; ION channel, ION transport, voltage-gated; HET: ATP; 2.30A {Homo sapiens} SCOP: d.37.1.1 PDB: 2ja3_A*
Probab=99.66 E-value=4.3e-17 Score=140.80 Aligned_cols=127 Identities=18% Similarity=0.157 Sum_probs=108.8
Q ss_pred cccccccccccCcc--eEEE--eCCCCccHHHHHHHHhcCCcEEeeEc-CCCCceeEEeEhhhhccccc-----------
Q 018729 204 TEKTAKDAMTPISK--AFSL--DLDATLTLDTLNAIMTMGHSRVPVYS-GNPTNIIGLILVKNLLSVDY----------- 267 (351)
Q Consensus 204 ~~~~v~~iMtpr~~--v~~v--~~~~t~~~e~~~~~~~~~~sr~PV~~-~~~d~ivGiv~~kdll~~~~----------- 267 (351)
.+.+|+++|+|..+ ++++ ++++++. ++++.+.+++++++||++ ++.++++|+|+.+|++....
T Consensus 9 ~~~~v~dim~~~~~~~~~~v~~~~~~~~~-~a~~~~~~~~~~~~pVv~~d~~~~lvGiit~~dl~~~~~~~~~~~~~~~~ 87 (185)
T 2j9l_A 9 HKTLAMDVMKPRRNDPLLTVLTQDSMTVE-DVETIISETTYSGFPVVVSRESQRLVGFVLRRDLIISIENARKKQDGVVS 87 (185)
T ss_dssp CCCBHHHHSBSCTTSCCCCCEESSCEEHH-HHHHHHHHCCCSEEEEESCTTTCBEEEEEEHHHHHHHHHHHHTSCSCCCT
T ss_pred ccCcHHHHhcccccCceEEEecCCCccHH-HHHHHHHhcCCCceeEEEECCCCeEEEEEEHHHHHHHHHhhcccCCCccc
Confidence 57899999998744 6777 9999998 999999999999999993 23489999999999986532
Q ss_pred -----------------cccccccccccccCceeCCCCCHHHHHHHHhhCCceEEEEEecCCCcccccchhhhhccccCC
Q 018729 268 -----------------RDAVPLRKMIIRRIPRVSEDMPLYDILNEFQKGHSHIAVVYKDLNEKKEGELFKDNCKKPRGQ 330 (351)
Q Consensus 268 -----------------~~~~~l~~i~~~~~~~V~~~~~l~~lL~~~~~~~~~~aiVvDe~g~~~GiVT~~Dil~~l~~~ 330 (351)
....++.++|.++++++++++++.++++.|.+++.+.++|+| +|+++|+||..|+++.+...
T Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~v~~im~~~~~~v~~~~~l~~a~~~m~~~~~~~l~Vvd-~g~~vGiit~~dll~~l~~~ 166 (185)
T 2j9l_A 88 TSIIYFTEHSPPLPPYTPPTLKLRNILDLSPFTVTDLTPMEIVVDIFRKLGLRQCLVTH-NGRLLGIITKKDVLKHIAQM 166 (185)
T ss_dssp TCEEECSSSCCCCCTTCCCCEECGGGEESSCCEEETTSBHHHHHHHHHHHTCSEEEEEE-TTEEEEEEEHHHHHHHHHHH
T ss_pred cceeecccCCcccccccccCccHHHhhCcCCeEeCCCCCHHHHHHHHHhCCCcEEEEEE-CCEEEEEEEHHHHHHHHHHh
Confidence 123568888768899999999999999999999999999999 79999999999999988654
Q ss_pred CC
Q 018729 331 PE 332 (351)
Q Consensus 331 ~~ 332 (351)
..
T Consensus 167 ~~ 168 (185)
T 2j9l_A 167 AN 168 (185)
T ss_dssp CC
T ss_pred hc
Confidence 43
No 45
>2o16_A Acetoin utilization protein ACUB, putative; structural genomics, unknown function, PSI-2, protein struct initiative; 1.90A {Vibrio cholerae} SCOP: d.37.1.1
Probab=99.65 E-value=9.3e-17 Score=136.21 Aligned_cols=121 Identities=17% Similarity=0.149 Sum_probs=106.0
Q ss_pred cccccccccccCcceEEEeCCCCccHHHHHHHHhcCCcEEeeEcCCCCceeEEeEhhhhccccc------------cccc
Q 018729 204 TEKTAKDAMTPISKAFSLDLDATLTLDTLNAIMTMGHSRVPVYSGNPTNIIGLILVKNLLSVDY------------RDAV 271 (351)
Q Consensus 204 ~~~~v~~iMtpr~~v~~v~~~~t~~~e~~~~~~~~~~sr~PV~~~~~d~ivGiv~~kdll~~~~------------~~~~ 271 (351)
...+|+++|++ +++++++++++. ++++.+.+++++++||++++ ++++|+++.+|++.... ....
T Consensus 3 ~~~~v~dim~~--~~~~v~~~~tl~-~a~~~m~~~~~~~~pVvd~~-~~lvGivt~~dl~~~~~~~~~~~~~~~~~~~~~ 78 (160)
T 2o16_A 3 LMIKVEDMMTR--HPHTLLRTHTLN-DAKHLMEALDIRHVPIVDAN-KKLLGIVSQRDLLAAQESSLQRSAQGDSLAFET 78 (160)
T ss_dssp CCCBGGGTSEE--SCCCBCTTSBHH-HHHHHHHHHTCSEEEEECTT-CBEEEEEEHHHHHHHHHHHCC---------CCC
T ss_pred CcCcHHHHhcC--CCeEECCCCcHH-HHHHHHHHcCCCEEEEEcCC-CcEEEEEeHHHHHHHHHHhhcccccccchhccc
Confidence 45789999987 668899999998 99999999999999999865 89999999999986432 1245
Q ss_pred cccccccccCceeCCCCCHHHHHHHHhhCCceEEEEEecCCCcccccchhhhhccccC
Q 018729 272 PLRKMIIRRIPRVSEDMPLYDILNEFQKGHSHIAVVYKDLNEKKEGELFKDNCKKPRG 329 (351)
Q Consensus 272 ~l~~i~~~~~~~V~~~~~l~~lL~~~~~~~~~~aiVvDe~g~~~GiVT~~Dil~~l~~ 329 (351)
++.++|.++++++++++++.++++.|.+++.+.++|+|+ |+++|+||..|+++.+..
T Consensus 79 ~v~~im~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~-g~lvGiit~~dil~~~~~ 135 (160)
T 2o16_A 79 PLFEVMHTDVTSVAPQAGLKESAIYMQKHKIGCLPVVAK-DVLVGIITDSDFVTIAIN 135 (160)
T ss_dssp BHHHHSCSCEEEBCTTSBHHHHHHHHHHTTCSCEEEEET-TEEEEEECHHHHHHHHHH
T ss_pred CHHHHhcCCCeEECCCCCHHHHHHHHHHhCCCEEEEEEC-CEEEEEEEHHHHHHHHHH
Confidence 788887778889999999999999999999999999998 999999999999987654
No 46
>2uv4_A 5'-AMP-activated protein kinase subunit gamma-1; transferase, CBS domain, lipid synthesis, fatty acid biosynthesis; HET: AMP; 1.33A {Homo sapiens} PDB: 2uv5_A* 2uv6_A* 2uv7_A*
Probab=99.65 E-value=1.6e-16 Score=133.37 Aligned_cols=121 Identities=13% Similarity=0.102 Sum_probs=104.6
Q ss_pred ccccccccccccCcceEEEeCCCCccHHHHHHHHhcCCcEEeeEcCCCCceeEEeEhhhhccccccc-----cccccccc
Q 018729 203 LTEKTAKDAMTPISKAFSLDLDATLTLDTLNAIMTMGHSRVPVYSGNPTNIIGLILVKNLLSVDYRD-----AVPLRKMI 277 (351)
Q Consensus 203 l~~~~v~~iMtpr~~v~~v~~~~t~~~e~~~~~~~~~~sr~PV~~~~~d~ivGiv~~kdll~~~~~~-----~~~l~~i~ 277 (351)
+++.+|+++ .++.++++++++. ++++.+.+++++.+||++++ ++++|+++.+|++.....+ +.++.++|
T Consensus 20 l~~~~v~~~----~~~~~v~~~~~~~-~a~~~m~~~~~~~~pVvd~~-~~~vGivt~~dl~~~~~~~~~~~~~~~v~~~m 93 (152)
T 2uv4_A 20 LEELQIGTY----ANIAMVRTTTPVY-VALGIFVQHRVSALPVVDEK-GRVVDIYSKFDVINLAAEKTYNNLDVSVTKAL 93 (152)
T ss_dssp HHHHTCSBC----SSCCCEETTCBHH-HHHHHHHHHCCSEEEEECTT-SBEEEEEEHHHHHHHHHCSSCCCTTSBGGGGG
T ss_pred HHHccCCcc----CCceEeCCCCcHH-HHHHHHHHcCCceEeEECCC-CcEEEEEeHHHHHHHhcchhhhhhcchHHHHH
Confidence 356778887 4678899999998 99999999999999999875 8999999999998654321 35678875
Q ss_pred c------ccCceeCCCCCHHHHHHHHhhCCceEEEEEecCCCcccccchhhhhccccC
Q 018729 278 I------RRIPRVSEDMPLYDILNEFQKGHSHIAVVYKDLNEKKEGELFKDNCKKPRG 329 (351)
Q Consensus 278 ~------~~~~~V~~~~~l~~lL~~~~~~~~~~aiVvDe~g~~~GiVT~~Dil~~l~~ 329 (351)
. ++++++++++++.++++.|.+++.+.++|+|++|+++|+||..|+++.+..
T Consensus 94 ~~~~~~~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~~vGiit~~dil~~l~~ 151 (152)
T 2uv4_A 94 QHRSHYFEGVLKCYLHETLETIINRLVEAEVHRLVVVDENDVVKGIVSLSDILQALVL 151 (152)
T ss_dssp GTCCHHHHTCSEECTTSBHHHHHHHHHHHTCSEEEEECTTSBEEEEEEHHHHHHHHC-
T ss_pred hhhhcccCCCeEECCCCcHHHHHHHHHHcCCeEEEEECCCCeEEEEEEHHHHHHHHHh
Confidence 4 788999999999999999999999999999999999999999999987753
No 47
>2pfi_A Chloride channel protein CLC-Ka; cystathionine beta synthetase (CBS) domains containing protein, transport protein; 1.60A {Homo sapiens}
Probab=99.64 E-value=9.3e-17 Score=135.85 Aligned_cols=130 Identities=11% Similarity=0.114 Sum_probs=106.3
Q ss_pred HHhhhcccccccccccccCcceEEEeCCCCccHHHHHHHHhcCCcEEeeEcC-CCCceeEEeEhhhhccccccc------
Q 018729 197 IAGALELTEKTAKDAMTPISKAFSLDLDATLTLDTLNAIMTMGHSRVPVYSG-NPTNIIGLILVKNLLSVDYRD------ 269 (351)
Q Consensus 197 i~~vl~l~~~~v~~iMtpr~~v~~v~~~~t~~~e~~~~~~~~~~sr~PV~~~-~~d~ivGiv~~kdll~~~~~~------ 269 (351)
..+.+.+.+.+|+++|++ ++++++.++++. ++++.+.+++++.+||+++ +.++++|+++.+|++.....+
T Consensus 4 ~~~~~~~~~~~v~dim~~--~~~~v~~~~~~~-~a~~~~~~~~~~~~pVvd~~~~~~~~Givt~~dl~~~~~~~~~~~~~ 80 (164)
T 2pfi_A 4 LGRNIGSHHVRVEHFMNH--SITTLAKDTPLE-EVVKVVTSTDVTEYPLVESTESQILVGIVQRAQLVQALQAEPPSRAP 80 (164)
T ss_dssp ------CCSCBHHHHCBC--CCCCEETTCBHH-HHHHHHHTCCCSEEEEESCTTTCBEEEEEEHHHHHHHHHC-------
T ss_pred ccccccccCCCHHHHcCC--CCeEECCCCcHH-HHHHHHHhCCCCceeEEecCCCCEEEEEEEHHHHHHHHHhhccccCC
Confidence 344566788999999987 668899999998 9999999999999999986 248999999999998654221
Q ss_pred --ccccccccccc------CceeCCCCCHHHHHHHHhhCCceEEEEEecCCCcccccchhhhhccccCC
Q 018729 270 --AVPLRKMIIRR------IPRVSEDMPLYDILNEFQKGHSHIAVVYKDLNEKKEGELFKDNCKKPRGQ 330 (351)
Q Consensus 270 --~~~l~~i~~~~------~~~V~~~~~l~~lL~~~~~~~~~~aiVvDe~g~~~GiVT~~Dil~~l~~~ 330 (351)
..++.++|.++ +.++++++++.++++.|.+++.+.++|+| +|+++|+||..|+++.+.+.
T Consensus 81 ~~~~~v~~~m~~~~~~~~~~~~v~~~~~l~~~~~~m~~~~~~~lpVvd-~g~l~Giit~~dil~~~~~~ 148 (164)
T 2pfi_A 81 GHQQCLQDILARGCPTEPVTLTLFSETTLHQAQNLFKLLNLQSLFVTS-RGRAVGCVSWVEMKKAISNL 148 (164)
T ss_dssp CCCCBHHHHHHTTCCCBCCCCCEETTCBHHHHHHHHHHTTCSEEEEEE-TTEEEEEEEHHHHHHHHHHH
T ss_pred cccchhhhhhcccccccCCceEECCCCcHHHHHHHHHHhCCCEEEEEE-CCEEEEEEEHHHHHHHHHhh
Confidence 24566765444 68899999999999999999999999999 69999999999999887654
No 48
>1zfj_A Inosine monophosphate dehydrogenase; IMPDH, CBS domains, oxidoreductase; HET: IMP; 1.90A {Streptococcus pyogenes} SCOP: c.1.5.1 d.37.1.1
Probab=99.64 E-value=3.7e-16 Score=156.11 Aligned_cols=151 Identities=10% Similarity=0.103 Sum_probs=128.0
Q ss_pred cccHHHHHHHHHhcccccccCCCCC-----HHHHHHHHhhhcccccccccccccCcceEEEeCCCCccHHHHHHHHhcCC
Q 018729 166 LLRRAELKTFVNFHGNEAGKGGDLT-----HDETTIIAGALELTEKTAKDAMTPISKAFSLDLDATLTLDTLNAIMTMGH 240 (351)
Q Consensus 166 ~~t~eEl~~lv~~~~~e~~~~g~l~-----~~e~~~i~~vl~l~~~~v~~iMtpr~~v~~v~~~~t~~~e~~~~~~~~~~ 240 (351)
.+|++|+...+.. .+..|.+. +++++++++++++ +++|+| +++++++++++. ++++.+.++++
T Consensus 54 ~vt~~eLa~av~~----~Gg~G~i~~~~~~e~~~~~i~~v~~~-----~~im~~--~~~~v~~~~tv~-ea~~~m~~~~~ 121 (491)
T 1zfj_A 54 TVTGSKMAIAIAR----AGGLGVIHKNMSITEQAEEVRKVKRS-----ENGVII--DPFFLTPEHKVS-EAEELMQRYRI 121 (491)
T ss_dssp TTCSHHHHHHHHH----TTCEEEECCSSCHHHHHHHHHHHHHH-----TTTTSS--SCCCBCSSSBHH-HHHHHHHHTTC
T ss_pred hccHHHHHHHHHH----cCCceEEeCCCCHHHHHHHHHHHhhH-----HhcCcC--CCeEECCCCcHH-HHHHHHHHcCC
Confidence 4678899988874 22234454 6788999888765 679987 678899999998 99999999999
Q ss_pred cEEeeEcC-CCCceeEEeEhhhhccccccccccccccccc-cCceeCCCCCHHHHHHHHhhCCceEEEEEecCCCccccc
Q 018729 241 SRVPVYSG-NPTNIIGLILVKNLLSVDYRDAVPLRKMIIR-RIPRVSEDMPLYDILNEFQKGHSHIAVVYKDLNEKKEGE 318 (351)
Q Consensus 241 sr~PV~~~-~~d~ivGiv~~kdll~~~~~~~~~l~~i~~~-~~~~V~~~~~l~~lL~~~~~~~~~~aiVvDe~g~~~GiV 318 (351)
+++||+++ +.++++|+|+.+|++... +.+.++.++|.+ +++++++++++.++++.|++++.+.++|||++|+++|++
T Consensus 122 ~~~pVvd~~~~~~lvGivt~~Dl~~~~-~~~~~v~~im~~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVVd~~g~lvGiv 200 (491)
T 1zfj_A 122 SGVPIVETLANRKLVGIITNRDMRFIS-DYNAPISEHMTSEHLVTAAVGTDLETAERILHEHRIEKLPLVDNSGRLSGLI 200 (491)
T ss_dssp SEEEEESCTTTCBEEEEEEHHHHHHCS-CSSSBTTTSCCCSCCCCEETTCCHHHHHHHHHHTTCSEEEEECTTSBEEEEE
T ss_pred CEEEEEEeCCCCEEEEEEEHHHHhhhc-cCCCcHHHHcCCCCCEEECCCCCHHHHHHHHHHcCCCEEEEEcCCCcEEEEE
Confidence 99999982 348999999999998642 345688998666 889999999999999999999999999999999999999
Q ss_pred chhhhhccccC
Q 018729 319 LFKDNCKKPRG 329 (351)
Q Consensus 319 T~~Dil~~l~~ 329 (351)
|.+|+++.+..
T Consensus 201 t~~Dil~~~~~ 211 (491)
T 1zfj_A 201 TIKDIEKVIEF 211 (491)
T ss_dssp EHHHHHHHHHC
T ss_pred EHHHHHHHHhc
Confidence 99999998764
No 49
>3ddj_A CBS domain-containing protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.80A {Sulfolobus solfataricus} SCOP: d.37.1.1 d.37.1.1
Probab=99.64 E-value=1.9e-16 Score=147.16 Aligned_cols=148 Identities=15% Similarity=0.176 Sum_probs=122.7
Q ss_pred cccHHHHHHHHHhcccccccCCCCCHHHHHHHHhhhcccccccccccccCcceEEEeCCCCccHHHHHHHHhcCCcEEee
Q 018729 166 LLRRAELKTFVNFHGNEAGKGGDLTHDETTIIAGALELTEKTAKDAMTPISKAFSLDLDATLTLDTLNAIMTMGHSRVPV 245 (351)
Q Consensus 166 ~~t~eEl~~lv~~~~~e~~~~g~l~~~e~~~i~~vl~l~~~~v~~iMtpr~~v~~v~~~~t~~~e~~~~~~~~~~sr~PV 245 (351)
.+|.+||...+.. +.+. .+...+.+++.+.+++++|+| +++++++++++. ++++.+.+++++++||
T Consensus 64 ivT~~Di~~~~~~----~~~~-------~~~~~~~~~~~~~~v~~im~~--~~~~v~~~~~~~-~a~~~m~~~~~~~lpV 129 (296)
T 3ddj_A 64 LLTTRDLLSTVES----YCKD-------SCSQGDLYHISTTPIIDYMTP--NPVTVYNTSDEF-TAINIMVTRNFGSLPV 129 (296)
T ss_dssp EEEHHHHHGGGTT----CC----------CCHHHHHHHHTSBGGGTSEE--SCCCEETTSCHH-HHHHHHHHHTCSEEEE
T ss_pred EEeHHHHHHHhcc----cccc-------cccchhhHHHhcccHHHhccC--CCEEEcCCCCHH-HHHHHHHHcCCCEEEE
Confidence 4677787765531 1100 344556667778999999997 668899999998 9999999999999999
Q ss_pred EcCCCCceeEEeEhhhhcccccc--ccccccccccccCceeCCCCCHHHHHHHHhhCCceEEEEEecCCCcccccchhhh
Q 018729 246 YSGNPTNIIGLILVKNLLSVDYR--DAVPLRKMIIRRIPRVSEDMPLYDILNEFQKGHSHIAVVYKDLNEKKEGELFKDN 323 (351)
Q Consensus 246 ~~~~~d~ivGiv~~kdll~~~~~--~~~~l~~i~~~~~~~V~~~~~l~~lL~~~~~~~~~~aiVvDe~g~~~GiVT~~Di 323 (351)
++++ ++++|+++.+|++..... ...++.++|.+++.++++++++.++++.|++++.+.++|+|++|+++|++|..|+
T Consensus 130 vd~~-~~lvGivt~~dl~~~~~~~~~~~~v~~~m~~~~~~v~~~~~l~~~~~~m~~~~~~~~~Vvd~~~~~~Givt~~dl 208 (296)
T 3ddj_A 130 VDIN-DKPVGIVTEREFLLLYKDLDEIFPVKVFMSTKVQTIYKEVRLDQAVKLMLRRGFRRLPVIDDDNKVVGIVTVVNA 208 (296)
T ss_dssp ECTT-SCEEEEEEHHHHGGGGGGSCCCCBHHHHSBCSCCCEETTSBHHHHHHHHHHHTCSEEEEECTTSCEEEEEEHHHH
T ss_pred EcCC-CcEEEEEeHHHHHHhhhcccccccHHHhhcCCCeEECCCCCHHHHHHHHHHcCCCEEEEEcCCCEEEEEEEHHHH
Confidence 9865 899999999999875432 2357888877889999999999999999999999999999999999999999999
Q ss_pred hcccc
Q 018729 324 CKKPR 328 (351)
Q Consensus 324 l~~l~ 328 (351)
++.+.
T Consensus 209 ~~~~~ 213 (296)
T 3ddj_A 209 IKQLA 213 (296)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 98764
No 50
>3usb_A Inosine-5'-monophosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, CBS-domain; HET: MSE IMP; 2.38A {Bacillus anthracis} PDB: 3tsd_A* 3tsb_A*
Probab=99.63 E-value=4.1e-16 Score=156.08 Aligned_cols=150 Identities=12% Similarity=0.123 Sum_probs=123.8
Q ss_pred cccHHHHHHHHHhcccccccCCCCC-----HHHHHHHHhhhcccccccccccccCcceEEEeCCCCccHHHHHHHHhcCC
Q 018729 166 LLRRAELKTFVNFHGNEAGKGGDLT-----HDETTIIAGALELTEKTAKDAMTPISKAFSLDLDATLTLDTLNAIMTMGH 240 (351)
Q Consensus 166 ~~t~eEl~~lv~~~~~e~~~~g~l~-----~~e~~~i~~vl~l~~~~v~~iMtpr~~v~~v~~~~t~~~e~~~~~~~~~~ 240 (351)
.+|++++...+...+ .-|.|+ +++.++++++.. .++.|++ +++++++++++. ++++.+.++++
T Consensus 77 tvTe~~lAia~a~~G----giGvIh~~~~~~~q~~~V~~V~~-----~~~~m~~--d~v~l~~~~tv~-ea~~~m~~~~~ 144 (511)
T 3usb_A 77 TVTEADMAIAMARQG----GLGIIHKNMSIEQQAEQVDKVKR-----SESGVIS--DPFFLTPEHQVY-DAEHLMGKYRI 144 (511)
T ss_dssp TTCSHHHHHHHHHHT----CEEEECSSSCHHHHHHHHHHHHT-----SSSCSSS--SCCCBCTTSBHH-HHHHHHHHHCC
T ss_pred hhcHHHHHHHHHhcC----CceeecccCCHHHHHHHHHHhhc-----ccccccc--CCEEECCCCCHH-HHHHHHHHcCC
Confidence 468899877775322 124443 455667777765 5567865 678899999998 99999999999
Q ss_pred cEEeeEcC--CCCceeEEeEhhhhccccccccccccccccc-cCceeCCCCCHHHHHHHHhhCCceEEEEEecCCCcccc
Q 018729 241 SRVPVYSG--NPTNIIGLILVKNLLSVDYRDAVPLRKMIIR-RIPRVSEDMPLYDILNEFQKGHSHIAVVYKDLNEKKEG 317 (351)
Q Consensus 241 sr~PV~~~--~~d~ivGiv~~kdll~~~~~~~~~l~~i~~~-~~~~V~~~~~l~~lL~~~~~~~~~~aiVvDe~g~~~Gi 317 (351)
+++||+++ + ++++|+|+.+|+... ...+.++.++|.+ +++++++++++.++++.|++++.+.++||||+|+++|+
T Consensus 145 s~~pVvd~g~~-~~lvGiVt~rDl~~~-~~~~~~V~~vM~~~~~vtv~~~~~l~eal~~m~~~~i~~lpVVDe~g~l~Gi 222 (511)
T 3usb_A 145 SGVPVVNNLDE-RKLVGIITNRDMRFI-QDYSIKISDVMTKEQLITAPVGTTLSEAEKILQKYKIEKLPLVDNNGVLQGL 222 (511)
T ss_dssp SEEEEESCTTT-CBEEEEEEHHHHTTC-CCSSSBHHHHCCCCCCCCEETTCCHHHHHHHHHHHTCSEEEEECTTSBEEEE
T ss_pred cEEEEEecCCC-CEEEEEEEehHhhhh-ccCCCcHHHhcccCCCEEECCCCCHHHHHHHHHHcCCCEEEEEeCCCCEeee
Confidence 99999986 4 899999999999763 3335688998665 88999999999999999999999999999999999999
Q ss_pred cchhhhhccccC
Q 018729 318 ELFKDNCKKPRG 329 (351)
Q Consensus 318 VT~~Dil~~l~~ 329 (351)
||.+|+++.+..
T Consensus 223 IT~~Dil~~~~~ 234 (511)
T 3usb_A 223 ITIKDIEKVIEF 234 (511)
T ss_dssp EEHHHHHHHHHC
T ss_pred ccHHHHHHhhhc
Confidence 999999998754
No 51
>3kh5_A Protein MJ1225; AMPK, AMP, ADP, ATP, CBS domain, archaea, unknown function; HET: ADP AMP; 2.10A {Methanocaldococcus jannaschii} PDB: 3lfz_A*
Probab=99.61 E-value=2.8e-16 Score=144.10 Aligned_cols=151 Identities=12% Similarity=0.138 Sum_probs=120.7
Q ss_pred cccHHHHHHHHHhcccccccCCCCCHHHHHHHHhhhcccccccccccccCcceEEEeCCCCccHHHHHHHHhcCCcEEee
Q 018729 166 LLRRAELKTFVNFHGNEAGKGGDLTHDETTIIAGALELTEKTAKDAMTPISKAFSLDLDATLTLDTLNAIMTMGHSRVPV 245 (351)
Q Consensus 166 ~~t~eEl~~lv~~~~~e~~~~g~l~~~e~~~i~~vl~l~~~~v~~iMtpr~~v~~v~~~~t~~~e~~~~~~~~~~sr~PV 245 (351)
.+|.+|+...+.. +.+.+.++ .....++++..+.+++++|+| ++++++.++++. ++++.+.+++++++||
T Consensus 51 ivt~~di~~~~~~----~~~~~~~~---~~~~~~~~~~~~~~v~~im~~--~~~~v~~~~~~~-~a~~~~~~~~~~~~~V 120 (280)
T 3kh5_A 51 IITSMDIVDFMGG----GSKYNLIR---EKHERNFLAAINEPVREIMEE--NVITLKENADID-EAIETFLTKNVGGAPI 120 (280)
T ss_dssp EEEHHHHHHHTTT----SGGGHHHH---TTSTTCHHHHTTSBGGGTSBC--SCCCEETTCBHH-HHHHHHHHTTCSEEEE
T ss_pred EEEHHHHHHHhcc----cchhhhhh---hccccchhHHhhhhHHHhcCC--CCEEECCCCCHH-HHHHHHHhCCCCEEEE
Confidence 4688888876641 11112111 111233444457899999987 678899999998 9999999999999999
Q ss_pred EcCCCCceeEEeEhhhhcccccc---ccccccccccccCceeCCCCCHHHHHHHHhhCCceEEEEEecCCCcccccchhh
Q 018729 246 YSGNPTNIIGLILVKNLLSVDYR---DAVPLRKMIIRRIPRVSEDMPLYDILNEFQKGHSHIAVVYKDLNEKKEGELFKD 322 (351)
Q Consensus 246 ~~~~~d~ivGiv~~kdll~~~~~---~~~~l~~i~~~~~~~V~~~~~l~~lL~~~~~~~~~~aiVvDe~g~~~GiVT~~D 322 (351)
++++ ++++|+++.+|++....+ ...++.++|.+++.++++++++.++++.|++++.+.++|+ ++|+++|+||..|
T Consensus 121 vd~~-~~~~Givt~~dl~~~~~~~~~~~~~v~~~m~~~~~~v~~~~~l~~~~~~~~~~~~~~~~Vv-~~~~~~Givt~~d 198 (280)
T 3kh5_A 121 VNDE-NQLISLITERDVIRALLDKIDENEVIDDYITRDVIVATPGERLKDVARTMVRNGFRRLPVV-SEGRLVGIITSTD 198 (280)
T ss_dssp ECTT-CBEEEEEEHHHHHHHHGGGSCTTCBSGGGCBCSCCCBCTTCBHHHHHHHHHHHTCSEEEEE-ETTEEEEEEEHHH
T ss_pred EcCC-CEEEEEEEHHHHHHHHhhcCCCCCCHHHHhCCCCeEECCCCcHHHHHHHHHHcCCCEEEEE-ECCEEEEEEEHHH
Confidence 9876 899999999999875432 2347888877889999999999999999999999999999 6899999999999
Q ss_pred hhcccc
Q 018729 323 NCKKPR 328 (351)
Q Consensus 323 il~~l~ 328 (351)
+++.+.
T Consensus 199 l~~~~~ 204 (280)
T 3kh5_A 199 FIKLLG 204 (280)
T ss_dssp HHHHHT
T ss_pred HHHHHh
Confidence 998874
No 52
>1me8_A Inosine-5'-monophosphate dehydrogenase; alpha beta barrel, oxidoreductase; HET: RVP; 1.90A {Tritrichomonas foetus} SCOP: c.1.5.1 PDB: 1ak5_A* 1me7_A* 1me9_A* 1meh_A* 1mei_A* 1mew_A* 1pvn_A* 1lrt_A*
Probab=99.59 E-value=2e-16 Score=158.34 Aligned_cols=153 Identities=11% Similarity=0.075 Sum_probs=21.7
Q ss_pred cccHHHHHHHHHhcccccccCCCC-----CHHHHHHHHhhhcccccccccc-cccCcceEEEeCCCCccHHHHHHHHhcC
Q 018729 166 LLRRAELKTFVNFHGNEAGKGGDL-----THDETTIIAGALELTEKTAKDA-MTPISKAFSLDLDATLTLDTLNAIMTMG 239 (351)
Q Consensus 166 ~~t~eEl~~lv~~~~~e~~~~g~l-----~~~e~~~i~~vl~l~~~~v~~i-Mtpr~~v~~v~~~~t~~~e~~~~~~~~~ 239 (351)
.++++++...+...+ ..|.+ .+++++++.++.. .++ |+| +++++++++++. ++++.+.+++
T Consensus 61 ~vt~~~la~~la~~g----g~G~I~~~~~~e~~~~~v~~V~~------~e~gM~~--~~~~v~~~~tv~-eal~~m~~~~ 127 (503)
T 1me8_A 61 SVSGEKMAIALAREG----GISFIFGSQSIESQAAMVHAVKN------FKAGFVV--SDSNVKPDQTFA-DVLAISQRTT 127 (503)
T ss_dssp TTCSHHHHHHHHHTT----CEEEECCSSCHHHHHHHHHHHHT------TTC-----------------------------
T ss_pred hhhHHHHHHHHHhCC----CcceeeCCCCHHHHHHHHhhhhh------cccCccc--CCeEECCCCcHH-HHHHHHHHcC
Confidence 467889987776321 11222 2567778877654 345 987 778999999998 9999999999
Q ss_pred CcEEeeEcCC--CCceeEEeEhhhhcccccccccccccccccc--CceeCCCCCHHHHHHHHhhCCceEEEEEecCCCcc
Q 018729 240 HSRVPVYSGN--PTNIIGLILVKNLLSVDYRDAVPLRKMIIRR--IPRVSEDMPLYDILNEFQKGHSHIAVVYKDLNEKK 315 (351)
Q Consensus 240 ~sr~PV~~~~--~d~ivGiv~~kdll~~~~~~~~~l~~i~~~~--~~~V~~~~~l~~lL~~~~~~~~~~aiVvDe~g~~~ 315 (351)
++++||++++ .++++|+|+.+|++......+.+++++|.++ ++++++++++.++++.|++++.+.++|+||+|+++
T Consensus 128 ~s~~pVvd~~~~~g~lvGiVt~~Dl~~~~~~~~~~V~diM~~~~~~~tv~~~~sl~ea~~~m~~~~i~~lpVVDe~g~lv 207 (503)
T 1me8_A 128 HNTVAVTDDGTPHGVLLGLVTQRDYPIDLTQTETKVSDMMTPFSKLVTAHQDTKLSEANKIIWEKKLNALPIIDDDQHLR 207 (503)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred ceEEEEEECCCcCCeEEEEEEHHHHHhhhccccCcHHHHhCCCCCCEEEcCCCcHHHHHHHHHHcCCCEEEEEcCCCeEE
Confidence 9999999864 3799999999999853222346788986555 89999999999999999999999999999999999
Q ss_pred cccchhhhhccccCCC
Q 018729 316 EGELFKDNCKKPRGQP 331 (351)
Q Consensus 316 GiVT~~Dil~~l~~~~ 331 (351)
|+||.+|+++.+....
T Consensus 208 GiIT~~Dil~~~~~~~ 223 (503)
T 1me8_A 208 YIVFRKDYDRSQVCHN 223 (503)
T ss_dssp --------------CC
T ss_pred EEEEecHHHHhhhccc
Confidence 9999999999886543
No 53
>1vr9_A CBS domain protein/ACT domain protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: MSE; 1.70A {Thermotoga maritima} SCOP: d.37.1.1
Probab=99.58 E-value=4.4e-15 Score=132.17 Aligned_cols=119 Identities=14% Similarity=0.063 Sum_probs=106.2
Q ss_pred ccccccccccCcceEEEeCCCCccHHHHHHHHhcCCcEEeeEcCCCCceeEEeEhhhhccccccccccccccccccCcee
Q 018729 205 EKTAKDAMTPISKAFSLDLDATLTLDTLNAIMTMGHSRVPVYSGNPTNIIGLILVKNLLSVDYRDAVPLRKMIIRRIPRV 284 (351)
Q Consensus 205 ~~~v~~iMtpr~~v~~v~~~~t~~~e~~~~~~~~~~sr~PV~~~~~d~ivGiv~~kdll~~~~~~~~~l~~i~~~~~~~V 284 (351)
..+++++|++ +++++++++++. ++++.+.+++++++||++++ ++++|+++.+|+..... +.++.++|.+++.++
T Consensus 12 ~~~~~~~~~~--~~~~v~~~~tv~-ea~~~m~~~~~~~~pVvd~~-~~l~Givt~~dl~~~~~--~~~v~~im~~~~~~v 85 (213)
T 1vr9_A 12 HMKVKKWVTQ--DFPMVEESATVR-ECLHRMRQYQTNECIVKDRE-GHFRGVVNKEDLLDLDL--DSSVFNKVSLPDFFV 85 (213)
T ss_dssp -CBGGGGCBS--CSCEEETTCBHH-HHHHHHHHTTSSEEEEECTT-SBEEEEEEGGGGTTSCT--TSBSGGGCBCTTCCE
T ss_pred ccCHHHhhcC--CCeEECCCCcHH-HHHHHHHHCCCCEEEEEcCC-CEEEEEEEHHHHHhhcC--CCcHHHHccCCCEEE
Confidence 3578999976 678899999998 99999999999999999865 89999999999987643 357889877888999
Q ss_pred CCCCCHHHHHHHHhhCCceEEEEEecCCCcccccchhhhhccccC
Q 018729 285 SEDMPLYDILNEFQKGHSHIAVVYKDLNEKKEGELFKDNCKKPRG 329 (351)
Q Consensus 285 ~~~~~l~~lL~~~~~~~~~~aiVvDe~g~~~GiVT~~Dil~~l~~ 329 (351)
++++++.++++.|.+++.+.++|+|++|+++|+||..|+++.+..
T Consensus 86 ~~~~~l~~a~~~m~~~~~~~lpVvd~~g~lvGiit~~Dil~~~~~ 130 (213)
T 1vr9_A 86 HEEDNITHALLLFLEHQEPYLPVVDEEMRLKGAVSLHDFLEALIE 130 (213)
T ss_dssp ETTSBHHHHHHHHHHCCCSEEEEECTTCBEEEEEEHHHHHHHHHH
T ss_pred CCCCcHHHHHHHHHHhCCCEEEEEcCCCEEEEEEEHHHHHHHHHH
Confidence 999999999999999999999999999999999999999987654
No 54
>2cu0_A Inosine-5'-monophosphate dehydrogenase; structural genomics, pyrococcus horikoshii OT3, riken structural genomics/PROT initiative, RSGI; HET: XMP; 2.10A {Pyrococcus horikoshii} SCOP: c.1.5.1
Probab=99.58 E-value=2.5e-16 Score=157.06 Aligned_cols=146 Identities=12% Similarity=0.192 Sum_probs=24.3
Q ss_pred cccHHHHHHHHHhcccccccCCCCC-----HHHHHHHHhhhcccccccccccccCcceEEEeCCCCccHHHHHHHHhcCC
Q 018729 166 LLRRAELKTFVNFHGNEAGKGGDLT-----HDETTIIAGALELTEKTAKDAMTPISKAFSLDLDATLTLDTLNAIMTMGH 240 (351)
Q Consensus 166 ~~t~eEl~~lv~~~~~e~~~~g~l~-----~~e~~~i~~vl~l~~~~v~~iMtpr~~v~~v~~~~t~~~e~~~~~~~~~~ 240 (351)
.+|++|+...+.. .+..|.+. +++++++++++++++ +|++ +++++++++++. ++++.+.++++
T Consensus 57 ~vt~~ela~ava~----~GglG~i~~~~~~e~~~~~I~~v~~~~~-----~m~~--~~~~v~~~~tv~-ea~~~~~~~~~ 124 (486)
T 2cu0_A 57 TVTEWEMAVAMAR----EGGLGVIHRNMGIEEQVEQVKRVKRAER-----LIVE--DVITIAPDETVD-FALFLMEKHGI 124 (486)
T ss_dssp TTCSHHHHHHHHH----TTCEEEECSSSCHHHHHHHHHHHHTCC------------------------------------
T ss_pred eecHHHHHHHHHh----cCCceeecCCCCHHHHHHHHHhhcchhh-----cccc--CceEECCCCCHH-HHHHHHHHcCC
Confidence 4678888887763 22223443 577899999988754 6874 779999999998 99999999999
Q ss_pred cEEeeEcCCCCceeEEeEhhhhccccccccccccccccccCceeCCCCCHHHHHHHHhhCCceEEEEEecCCCcccccch
Q 018729 241 SRVPVYSGNPTNIIGLILVKNLLSVDYRDAVPLRKMIIRRIPRVSEDMPLYDILNEFQKGHSHIAVVYKDLNEKKEGELF 320 (351)
Q Consensus 241 sr~PV~~~~~d~ivGiv~~kdll~~~~~~~~~l~~i~~~~~~~V~~~~~l~~lL~~~~~~~~~~aiVvDe~g~~~GiVT~ 320 (351)
+++||+++ ++++|+|+.+|++. +.+.++.++|.+++.++++++++.++++.|++++.+.++|+|++|+++|+||.
T Consensus 125 ~~~pVvd~--~~lvGivt~~Dl~~---~~~~~v~~im~~~~~~v~~~~~l~eal~~m~~~~~~~lpVVde~g~lvGiiT~ 199 (486)
T 2cu0_A 125 DGLPVVED--EKVVGIITKKDIAA---REGKLVKELMTKEVITVPESIEVEEALKIMIENRIDRLPVVDERGKLVGLITM 199 (486)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred cEEEEEEC--CEEEEEEEHHHhcc---CCCCCHHHHccCCCeEECCcCcHHHHHHHHHHcCCCEEEEEecCCeEEEEEEH
Confidence 99999986 89999999999986 33567889876688999999999999999999999999999999999999999
Q ss_pred hhhhcccc
Q 018729 321 KDNCKKPR 328 (351)
Q Consensus 321 ~Dil~~l~ 328 (351)
+|+++...
T Consensus 200 ~Dil~~~~ 207 (486)
T 2cu0_A 200 SDLVARKK 207 (486)
T ss_dssp -------C
T ss_pred HHHHHhhh
Confidence 99999865
No 55
>4avf_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase; 2.23A {Pseudomonas aeruginosa}
Probab=99.56 E-value=5.5e-16 Score=154.50 Aligned_cols=149 Identities=13% Similarity=0.173 Sum_probs=24.3
Q ss_pred cccHHHHHHHHHhcccccccCCCCC-----HHHHHHHHhhhcccccccccccccCcceEEEeCCCCccHHHHHHHHhcCC
Q 018729 166 LLRRAELKTFVNFHGNEAGKGGDLT-----HDETTIIAGALELTEKTAKDAMTPISKAFSLDLDATLTLDTLNAIMTMGH 240 (351)
Q Consensus 166 ~~t~eEl~~lv~~~~~e~~~~g~l~-----~~e~~~i~~vl~l~~~~v~~iMtpr~~v~~v~~~~t~~~e~~~~~~~~~~ 240 (351)
.+|++++...+... +.-|.++ +++++++.++. +++++|++ +++++++++++. ++++.+.++++
T Consensus 52 tVTe~~lA~ala~~----GGiGvI~~~~~~e~~a~~v~~vk-----~~~~~m~~--~~v~v~~~~tv~-ea~~~m~~~~~ 119 (490)
T 4avf_A 52 TVTEARLAIAMAQE----GGIGIIHKNMGIEQQAAEVRKVK-----KHETAIVR--DPVTVTPSTKII-ELLQMAREYGF 119 (490)
T ss_dssp TTCSHHHHHHHHHH----TSEEEECCSSCHHHHHHHHHHHH-----HCCC------------------------------
T ss_pred hhCHHHHHHHHHHc----CCCccccCCCCHHHHHHHhhhhc-----ccccCccc--CceEeCCCCcHH-HHHHHHHHhCC
Confidence 46889999877642 2234444 66788888774 47888975 668999999998 99999999999
Q ss_pred cEEeeEcCCCCceeEEeEhhhhcccccccccccccccc-c-cCceeCCCCCHHHHHHHHhhCCceEEEEEecCCCccccc
Q 018729 241 SRVPVYSGNPTNIIGLILVKNLLSVDYRDAVPLRKMII-R-RIPRVSEDMPLYDILNEFQKGHSHIAVVYKDLNEKKEGE 318 (351)
Q Consensus 241 sr~PV~~~~~d~ivGiv~~kdll~~~~~~~~~l~~i~~-~-~~~~V~~~~~l~~lL~~~~~~~~~~aiVvDe~g~~~GiV 318 (351)
+++||++ + ++++|+|+.+|+... ...+.++.++|. + ++.++++++++.++++.|++++.+.++||||+|+++|+|
T Consensus 120 s~~pVvd-~-g~lvGIVt~rDl~~~-~~~~~~V~~vMtp~~~~vtv~~~~~l~ea~~~m~~~~i~~lpVVDe~g~lvGiI 196 (490)
T 4avf_A 120 SGFPVVE-Q-GELVGIVTGRDLRVK-PNAGDTVAAIMTPKDKLVTAREGTPLEEMKAKLYENRIEKMLVVDENFYLRGLV 196 (490)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred CEEEEEE-C-CEEEEEEEhHHhhhc-cccCCcHHHHhccCCCCEEECCCCcHHHHHHHHHHcCCCEEEEEcCCCcEEEEE
Confidence 9999998 4 899999999998643 233568899865 3 689999999999999999999999999999999999999
Q ss_pred chhhhhccccC
Q 018729 319 LFKDNCKKPRG 329 (351)
Q Consensus 319 T~~Dil~~l~~ 329 (351)
|++|+++....
T Consensus 197 T~~Dil~~~~~ 207 (490)
T 4avf_A 197 TFRDIEKAKTY 207 (490)
T ss_dssp ----------C
T ss_pred ehHHhhhhccC
Confidence 99999987643
No 56
>3kh5_A Protein MJ1225; AMPK, AMP, ADP, ATP, CBS domain, archaea, unknown function; HET: ADP AMP; 2.10A {Methanocaldococcus jannaschii} PDB: 3lfz_A*
Probab=99.56 E-value=5.9e-15 Score=135.24 Aligned_cols=119 Identities=15% Similarity=0.181 Sum_probs=103.0
Q ss_pred ccccccCcceEEEeCCCCccHHHHHHHHhcCCcEEeeEcCCCCceeEEeEhhhhccccccc------------------c
Q 018729 209 KDAMTPISKAFSLDLDATLTLDTLNAIMTMGHSRVPVYSGNPTNIIGLILVKNLLSVDYRD------------------A 270 (351)
Q Consensus 209 ~~iMtpr~~v~~v~~~~t~~~e~~~~~~~~~~sr~PV~~~~~d~ivGiv~~kdll~~~~~~------------------~ 270 (351)
+++|++ +++++++++|+. ++++.+.+++++++||++++.++++|+++.+|++.....+ +
T Consensus 7 ~~i~~~--~~~~v~~~~sl~-~a~~~m~~~~~~~lpV~d~~~~~~~Givt~~di~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (280)
T 3kh5_A 7 KIAQNK--KIVTVYPTTTIR-KALMTMNENKYRRLPVVNAGNNKVVGIITSMDIVDFMGGGSKYNLIREKHERNFLAAIN 83 (280)
T ss_dssp GTSCCS--CCCCBCTTSBHH-HHHHHHHHHCCCEEEEECTTTCBEEEEEEHHHHHHHTTTSGGGHHHHTTSTTCHHHHTT
T ss_pred HHhcCC--CcEEECCCCcHH-HHHHHHHhCCCcEeeEEECCCCeEEEEEEHHHHHHHhcccchhhhhhhccccchhHHhh
Confidence 345655 789999999998 9999999999999999987558999999999998653211 2
Q ss_pred ccccccccccCceeCCCCCHHHHHHHHhhCCceEEEEEecCCCcccccchhhhhccccCC
Q 018729 271 VPLRKMIIRRIPRVSEDMPLYDILNEFQKGHSHIAVVYKDLNEKKEGELFKDNCKKPRGQ 330 (351)
Q Consensus 271 ~~l~~i~~~~~~~V~~~~~l~~lL~~~~~~~~~~aiVvDe~g~~~GiVT~~Dil~~l~~~ 330 (351)
.+++++|.+++.++++++++.++++.|++++.+.++|+|++|+++|++|..|+++.+.+.
T Consensus 84 ~~v~~im~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~~~~~Givt~~dl~~~~~~~ 143 (280)
T 3kh5_A 84 EPVREIMEENVITLKENADIDEAIETFLTKNVGGAPIVNDENQLISLITERDVIRALLDK 143 (280)
T ss_dssp SBGGGTSBCSCCCEETTCBHHHHHHHHHHTTCSEEEEECTTCBEEEEEEHHHHHHHHGGG
T ss_pred hhHHHhcCCCCEEECCCCCHHHHHHHHHhCCCCEEEEEcCCCEEEEEEEHHHHHHHHhhc
Confidence 478888777899999999999999999999999999999999999999999999876543
No 57
>3t4n_C Nuclear protein SNF4; CBS domain, nucleotide binding, cytosol, protein binding; HET: ADP; 2.30A {Saccharomyces cerevisiae} PDB: 3tdh_C* 3te5_C* 2qlv_C
Probab=99.54 E-value=5.2e-15 Score=139.08 Aligned_cols=125 Identities=14% Similarity=0.150 Sum_probs=109.0
Q ss_pred cccccccccc---cccCcceEEEeCCCCccHHHHHHHHhcCCcEEeeEcCCCCceeEEeEhhhhccccccc-----cccc
Q 018729 202 ELTEKTAKDA---MTPISKAFSLDLDATLTLDTLNAIMTMGHSRVPVYSGNPTNIIGLILVKNLLSVDYRD-----AVPL 273 (351)
Q Consensus 202 ~l~~~~v~~i---Mtpr~~v~~v~~~~t~~~e~~~~~~~~~~sr~PV~~~~~d~ivGiv~~kdll~~~~~~-----~~~l 273 (351)
.+.+.+++++ |++ ++.+++.++++. ++++.+.+++++++||++++ ++++|+++.+|++....++ +.++
T Consensus 183 ~~~~~~v~~~~~~m~~--~~~~v~~~~~~~-~~~~~m~~~~~~~~pVvd~~-~~~~Giit~~dl~~~~~~~~~~~~~~~v 258 (323)
T 3t4n_C 183 HFLKIPIGDLNIITQD--NMKSCQMTTPVI-DVIQMLTQGRVSSVPIIDEN-GYLINVYEAYDVLGLIKGGIYNDLSLSV 258 (323)
T ss_dssp GGCCSBGGGTTCSBCT--TCCCBCTTSBHH-HHHHHHHHHTCSEEEEECTT-CBEEEEEETTHHHHHHHTTHHHHTTSBH
T ss_pred hhhhCcHHHcCCCCCC--CcEEECCCCcHH-HHHHHHHHcCCCEEEEECCC-CeEEEEEeHHHHHHHHhhchhhhccCCH
Confidence 3556789999 754 678899999998 99999999999999999875 8999999999998754332 3477
Q ss_pred cccccc------cCceeCCCCCHHHHHHHHhhCCceEEEEEecCCCcccccchhhhhccccCC
Q 018729 274 RKMIIR------RIPRVSEDMPLYDILNEFQKGHSHIAVVYKDLNEKKEGELFKDNCKKPRGQ 330 (351)
Q Consensus 274 ~~i~~~------~~~~V~~~~~l~~lL~~~~~~~~~~aiVvDe~g~~~GiVT~~Dil~~l~~~ 330 (351)
.++|.+ +++++++++++.++++.|.+++.+.++|+|++|+++|+||..|+++.+.++
T Consensus 259 ~~~m~~~~~~~~~~~~v~~~~~l~~~~~~m~~~~~~~l~Vvd~~~~l~Giit~~Dil~~l~~~ 321 (323)
T 3t4n_C 259 GEALMRRSDDFEGVYTCTKNDKLSTIMDNIRKARVHRFFVVDDVGRLVGVLTLSDILKYILLG 321 (323)
T ss_dssp HHHGGGSCTTCCCCEEECTTCBHHHHHHHHHHSCCCEEEEECTTSBEEEEEEHHHHHHHHHHC
T ss_pred HHHHhhccccCCCCEEECCCCCHHHHHHHHHHhCCCEEEEECCCCcEEEEEEHHHHHHHHHhc
Confidence 888655 688999999999999999999999999999999999999999999988764
No 58
>3pc3_A CG1753, isoform A; CBS, synthase, PLP, heme, aminoacrylate, lyase; HET: HEM P1T; 1.55A {Drosophila melanogaster} PDB: 3pc2_A* 3pc4_A*
Probab=99.54 E-value=3.5e-15 Score=150.23 Aligned_cols=125 Identities=13% Similarity=0.103 Sum_probs=107.8
Q ss_pred ccccccccccccCcceEEEeCC-CCccHHHHHHHHhcCCcEEeeEcCCCCceeEEeEhhhhcccccc----ccccccccc
Q 018729 203 LTEKTAKDAMTPISKAFSLDLD-ATLTLDTLNAIMTMGHSRVPVYSGNPTNIIGLILVKNLLSVDYR----DAVPLRKMI 277 (351)
Q Consensus 203 l~~~~v~~iMtpr~~v~~v~~~-~t~~~e~~~~~~~~~~sr~PV~~~~~d~ivGiv~~kdll~~~~~----~~~~l~~i~ 277 (351)
+.+.+|+++|++ ++++++++ +++. ++++.|.+++++++||++++.++++|+|+.+|+++.... .+.++.++|
T Consensus 381 l~~~~V~diM~~--~~vtv~~~~~tv~-ea~~~m~~~~~~~lpVvd~~~g~lvGiVt~~Dll~~l~~~~~~~~~~V~~im 457 (527)
T 3pc3_A 381 WWSLAIAELELP--APPVILKSDATVG-EAIALMKKHRVDQLPVVDQDDGSVLGVVGQETLITQIVSMNRQQSDPAIKAL 457 (527)
T ss_dssp TTTSBGGGGCCC--CCSCCEETTCBHH-HHHHHHHHHTCSEEEEECTTTCCEEEEEEHHHHHHHHHHHCCCTTSBGGGGE
T ss_pred ccCCcHHHhCcC--CCeEEcCCCCcHH-HHHHHHHHcCCCeEEEEECCCCEEEEEEEHHHHHHHHHhccCcCCCcHHHHh
Confidence 557899999986 67889999 9998 999999999999999998334899999999999865322 246789998
Q ss_pred cccCceeCCCCCHHHHHHHHhhCCceEEEEEec----CCCcccccchhhhhccccCCCC
Q 018729 278 IRRIPRVSEDMPLYDILNEFQKGHSHIAVVYKD----LNEKKEGELFKDNCKKPRGQPE 332 (351)
Q Consensus 278 ~~~~~~V~~~~~l~~lL~~~~~~~~~~aiVvDe----~g~~~GiVT~~Dil~~l~~~~~ 332 (351)
.+++.+|++++++.++++.|.+++ +++|||+ +|+++|+||..|+++.+.....
T Consensus 458 ~~~~~~v~~~~~l~~a~~~m~~~~--~~pVVd~~~~~~g~lvGIVT~~Dll~~l~~~~~ 514 (527)
T 3pc3_A 458 NKRVIRLNESEILGKLARVLEVDP--SVLILGKNPAGKVELKALATKLDVTTFIAAGKQ 514 (527)
T ss_dssp ETTCCEEETTSBHHHHHHHHTTCS--EEEEEEECSSSCEEEEEEEEHHHHHHHHHTCCC
T ss_pred cCCCeEECCCCcHHHHHHHHhhCC--EEEEEeCCcccCCeEEEEEEHHHHHHHHHhccc
Confidence 899999999999999999997665 5799999 5999999999999999877654
No 59
>2yzq_A Putative uncharacterized protein PH1780; sheet/helix/sheet/sheet/helix, structural genomics, unknown function, NPPSFA; HET: SAM; 1.63A {Pyrococcus horikoshii} SCOP: d.37.1.1 d.37.1.1
Probab=99.54 E-value=5.8e-15 Score=135.70 Aligned_cols=118 Identities=19% Similarity=0.162 Sum_probs=87.5
Q ss_pred cccccccccCcceEEEeCCCCccHHHHHHHHhcCCcEEeeEcCCCCceeEEeEhhhhccccccccccccccccccCceeC
Q 018729 206 KTAKDAMTPISKAFSLDLDATLTLDTLNAIMTMGHSRVPVYSGNPTNIIGLILVKNLLSVDYRDAVPLRKMIIRRIPRVS 285 (351)
Q Consensus 206 ~~v~~iMtpr~~v~~v~~~~t~~~e~~~~~~~~~~sr~PV~~~~~d~ivGiv~~kdll~~~~~~~~~l~~i~~~~~~~V~ 285 (351)
++|+++|++ +++++++++++. ++++.+.+++++++||++++ ++++|+++.+|++.... +.+++++|.+++++++
T Consensus 1 m~v~~im~~--~~~~v~~~~~~~-~a~~~~~~~~~~~~pV~d~~-~~~~Giv~~~dl~~~~~--~~~v~~~m~~~~~~v~ 74 (282)
T 2yzq_A 1 MRVKTIMTQ--NPVTITLPATRN-YALELFKKYKVRSFPVVNKE-GKLVGIISVKRILVNPD--EEQLAMLVKRDVPVVK 74 (282)
T ss_dssp CBHHHHSEE--SCCCEESSCC-------------CCEEEEECTT-CCEEEEEESSCC------------CCCBSCCCEEE
T ss_pred CchHHhccC--CCeEECCCCcHH-HHHHHHHHcCCCeEEEEcCC-CcEEEEEEHHHHHhhhc--cCCHHHHcCCCCcEEC
Confidence 468999985 678899999998 99999999999999999864 89999999999986543 3578888667789999
Q ss_pred CCCCHHHHHHHHhhCCceEEEEEecCCCcccccchhhhhc-cccC
Q 018729 286 EDMPLYDILNEFQKGHSHIAVVYKDLNEKKEGELFKDNCK-KPRG 329 (351)
Q Consensus 286 ~~~~l~~lL~~~~~~~~~~aiVvDe~g~~~GiVT~~Dil~-~l~~ 329 (351)
+++++.++++.|.+++.+.++|+|++|+++|++|..|+++ .+.+
T Consensus 75 ~~~~l~~a~~~m~~~~~~~~~Vvd~~~~~~Giit~~di~~~~~~~ 119 (282)
T 2yzq_A 75 ENDTLKKAAKLMLEYDYRRVVVVDSKGKPVGILTVGDIIRRYFAK 119 (282)
T ss_dssp TTSBHHHHHHHHHHHTCSEEEEECTTSCEEEEEEHHHHHHHTTTT
T ss_pred CCCcHHHHHHHHHHcCCCEEEEEcCCCEEEEEEEHHHHHHHHHhc
Confidence 9999999999999999999999999999999999999998 6654
No 60
>3l2b_A Probable manganase-dependent inorganic pyrophosphatase; family II, CBS domain, bateman domain, AP4A, diadenosine polyphosphate, DRTGG; HET: B4P; 2.27A {Clostridium perfringens} PDB: 3l31_A*
Probab=99.54 E-value=6.5e-15 Score=133.43 Aligned_cols=119 Identities=15% Similarity=0.161 Sum_probs=98.1
Q ss_pred ccccccccccCcceEEEeCCCCccHHHHHHHHhcCCcEEeeEcCCCCceeEEeEhhhhcccccc----------------
Q 018729 205 EKTAKDAMTPISKAFSLDLDATLTLDTLNAIMTMGHSRVPVYSGNPTNIIGLILVKNLLSVDYR---------------- 268 (351)
Q Consensus 205 ~~~v~~iMtpr~~v~~v~~~~t~~~e~~~~~~~~~~sr~PV~~~~~d~ivGiv~~kdll~~~~~---------------- 268 (351)
+.+|+|+|++ ++.++++++++. ++++.|.+++++++||++++ ++++|+++.+|+++....
T Consensus 6 ~~~v~~im~~--~~~~v~~~~~~~-~a~~~m~~~~~~~lpVvd~~-~~l~Giit~~di~~~~~~~~~~~~~~~~~~~~~~ 81 (245)
T 3l2b_A 6 KLKVEDLEMD--KIAPLAPEVSLK-MAWNIMRDKNLKSIPVADGN-NHLLGMLSTSNITATYMDIWDSNILAKSATSLDN 81 (245)
T ss_dssp CCBGGGSCCB--CCCCBCTTCBHH-HHHHHHHHTTCSEEEEECTT-CBEEEEEEHHHHHHHHHCCCCTTHHHHTTCCHHH
T ss_pred cCcHHHhcCC--CCcEECCCCcHH-HHHHHHHHcCCCEEEEEcCC-CEEEEEEEHHHHHHHHHHhhhhhhhhhccCCHHH
Confidence 4689999976 568899999998 99999999999999999875 899999999998754210
Q ss_pred --------------------------------------------------------------------------------
Q 018729 269 -------------------------------------------------------------------------------- 268 (351)
Q Consensus 269 -------------------------------------------------------------------------------- 268 (351)
T Consensus 82 v~~~l~~~~l~~~~~~~~~~g~~~i~a~~~~~~~~~~~~~~ivIvgdr~~~~~~~i~~~~~~liit~~~~~~~~v~~~a~ 161 (245)
T 3l2b_A 82 ILDTLSAEAQNINEERKVFPGKVVVAAMQAESLKEFISEGDIAIAGDRAEIQAELIELKVSLLIVTGGHTPSKEIIELAK 161 (245)
T ss_dssp HHHHTTCEEEECCTTCCCCCSCEEECCSCGGGGGGTCCTTCEEEECSCHHHHHHHHHTTCSEEEECTTCCCCHHHHHHHH
T ss_pred HHHHhCCEEEeccCCcceeeeeEEEEeCChHHHHhcCCCCCEEEECCCHHHHHHHHHcCCCEEEECCCCCCCHHHHHHHH
Confidence
Q ss_pred ---------------------cccccccccc-ccCceeCCCCCHHHHHHHHhhCCceEEEEEecCCCcccccchhhhhcc
Q 018729 269 ---------------------DAVPLRKMII-RRIPRVSEDMPLYDILNEFQKGHSHIAVVYKDLNEKKEGELFKDNCKK 326 (351)
Q Consensus 269 ---------------------~~~~l~~i~~-~~~~~V~~~~~l~~lL~~~~~~~~~~aiVvDe~g~~~GiVT~~Dil~~ 326 (351)
...+++++|. +++.++++++++.++++.|++++.+..+|+|++|+++|+||..|+++.
T Consensus 162 ~~~~~~i~t~~d~~~~~~~~~~~~~v~~im~~~~~~~~~~~~~~~~~~~~m~~~~~~~~pVvd~~~~~~Giit~~dll~~ 241 (245)
T 3l2b_A 162 KNNITVITTPHDSFTASRLIVQSLPVDYVMTKDNLVAVSTDDLVEDVKVTMSETRYSNYPVIDENNKVVGSIARFHLIST 241 (245)
T ss_dssp HHTCEEEECSSCHHHHHHHGGGGSBHHHHSBCTTCCCEETTSBHHHHHHHHHHHCCSEEEEECTTCBEEEEEECC-----
T ss_pred HcCCeEEEeCCChHHHHHHHhcCCceeeEecCCccEEECCCCcHHHHHHHHHhcCCceEEEEcCCCeEEEEEEHHHhhch
Confidence 0123556665 789999999999999999999999999999999999999999999876
Q ss_pred c
Q 018729 327 P 327 (351)
Q Consensus 327 l 327 (351)
.
T Consensus 242 ~ 242 (245)
T 3l2b_A 242 H 242 (245)
T ss_dssp -
T ss_pred h
Confidence 4
No 61
>3ddj_A CBS domain-containing protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.80A {Sulfolobus solfataricus} SCOP: d.37.1.1 d.37.1.1
Probab=99.53 E-value=4.5e-15 Score=137.75 Aligned_cols=124 Identities=12% Similarity=0.124 Sum_probs=109.5
Q ss_pred ccccccccccccCcceEEEeCCCCccHHHHHHHHhcCCcEEeeEcCCCCceeEEeEhhhhcccccc----------cccc
Q 018729 203 LTEKTAKDAMTPISKAFSLDLDATLTLDTLNAIMTMGHSRVPVYSGNPTNIIGLILVKNLLSVDYR----------DAVP 272 (351)
Q Consensus 203 l~~~~v~~iMtpr~~v~~v~~~~t~~~e~~~~~~~~~~sr~PV~~~~~d~ivGiv~~kdll~~~~~----------~~~~ 272 (351)
..+.+++++|++ ++.++++++++. ++++.+.+++++++||++++ ++++|+++.+|++....+ .+.+
T Consensus 153 ~~~~~v~~~m~~--~~~~v~~~~~l~-~~~~~m~~~~~~~~~Vvd~~-~~~~Givt~~dl~~~~~~~~~~~~~~~~~~~~ 228 (296)
T 3ddj_A 153 DEIFPVKVFMST--KVQTIYKEVRLD-QAVKLMLRRGFRRLPVIDDD-NKVVGIVTVVNAIKQLAKAVDKLDPDYFYGKV 228 (296)
T ss_dssp CCCCBHHHHSBC--SCCCEETTSBHH-HHHHHHHHHTCSEEEEECTT-SCEEEEEEHHHHHHHHHHHHHHTCTHHHHTCB
T ss_pred cccccHHHhhcC--CCeEECCCCCHH-HHHHHHHHcCCCEEEEEcCC-CEEEEEEEHHHHHHHHHHHHhhcChhhhcCcC
Confidence 345689999975 668899999998 99999999999999999865 899999999999875431 2457
Q ss_pred ccccccccCceeCCCCCHHHHHHHHhhCCceEEEEEecCCCcccccchhhhhccccCC
Q 018729 273 LRKMIIRRIPRVSEDMPLYDILNEFQKGHSHIAVVYKDLNEKKEGELFKDNCKKPRGQ 330 (351)
Q Consensus 273 l~~i~~~~~~~V~~~~~l~~lL~~~~~~~~~~aiVvDe~g~~~GiVT~~Dil~~l~~~ 330 (351)
+.++|.++++++++++++.++++.|.+++.+.++|+|++|+++|+||..|+++.+.++
T Consensus 229 v~~~m~~~~~~v~~~~~l~~a~~~m~~~~~~~l~Vvd~~g~~~Giit~~Dil~~l~~~ 286 (296)
T 3ddj_A 229 VKDVMVTNLVTIDELASVNRAAAEMIVKRIGSLLILNKDNTIRGIITERDLLIALHHI 286 (296)
T ss_dssp HHHHSBCCCCBCCTTSBHHHHHHHHHHHTCSEEEEECTTSCEEEEEEHHHHHHHHHHH
T ss_pred HHHHhCCCCeEECCCCcHHHHHHHHHHcCCCEEEEECCCCeEEEEEcHHHHHHHHHHH
Confidence 8888778899999999999999999999999999999999999999999999988654
No 62
>2yzq_A Putative uncharacterized protein PH1780; sheet/helix/sheet/sheet/helix, structural genomics, unknown function, NPPSFA; HET: SAM; 1.63A {Pyrococcus horikoshii} SCOP: d.37.1.1 d.37.1.1
Probab=99.50 E-value=6.7e-14 Score=128.58 Aligned_cols=122 Identities=13% Similarity=0.079 Sum_probs=106.0
Q ss_pred cccccccccccCcceEEEeCCCCccHHHHHHHHhcCCcEEeeEcCCCCceeEEeEhhhhc------cccc------c---
Q 018729 204 TEKTAKDAMTPISKAFSLDLDATLTLDTLNAIMTMGHSRVPVYSGNPTNIIGLILVKNLL------SVDY------R--- 268 (351)
Q Consensus 204 ~~~~v~~iMtpr~~v~~v~~~~t~~~e~~~~~~~~~~sr~PV~~~~~d~ivGiv~~kdll------~~~~------~--- 268 (351)
.+.+++++|++ ++.+++.++++. ++.+.+.+++++++||.+++ ++++|+++.+|++ +... .
T Consensus 124 ~~~~v~~~m~~--~~~~v~~~~~l~-~~~~~~~~~~~~~l~Vvd~~-~~~~Giit~~dl~~~~~~~~~~~~~~~~~~~~~ 199 (282)
T 2yzq_A 124 KGVEIEPYYQR--YVSIVWEGTPLK-AALKALLLSNSMALPVVDSE-GNLVGIVDETDLLRDSEIVRIMKSTELAASSEE 199 (282)
T ss_dssp GGCBSTTTSBS--CCCCEETTSBHH-HHHHHHHTCSSSEEEEECTT-SCEEEEEEGGGGGGCGGGCC-------------
T ss_pred ccCcHHHHhCC--CCEEECCCCCHH-HHHHHHHHcCCcEEEEEcCC-CeEEEEEEHHHHhhhhhhhhhhccchhhhhhhh
Confidence 36789999965 567899999998 99999999999999999865 7899999999998 4321 0
Q ss_pred -------------------ccccccccccccCceeCCCCCHHHHHHHHhhCCceEEEEEecCCCcccccchhhhhccccC
Q 018729 269 -------------------DAVPLRKMIIRRIPRVSEDMPLYDILNEFQKGHSHIAVVYKDLNEKKEGELFKDNCKKPRG 329 (351)
Q Consensus 269 -------------------~~~~l~~i~~~~~~~V~~~~~l~~lL~~~~~~~~~~aiVvDe~g~~~GiVT~~Dil~~l~~ 329 (351)
...++.++|.+++.++++++++.++++.|.+++.+..+|+|+.|+++|+||..|+++.+..
T Consensus 200 ~~~~~~~~~~~~~~~~~~~~~~~v~~im~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~~~lvGiit~~Dil~~~~~ 279 (282)
T 2yzq_A 200 EWILESHPTLLFEKFELQLPNKPVAEIMTRDVIVATPHMTVHEVALKMAKYSIEQLPVIRGEGDLIGLIRDFDLLKVLVK 279 (282)
T ss_dssp -------------------CCCBGGGTCBSSCCCBCTTSBHHHHHHHHHHHTCSEEEEEETTTEEEEEEEHHHHGGGGCC
T ss_pred hhhcccchHHHHhHhhhhhccCCHHHhcCCCCceeCCCCCHHHHHHHHHHcCcceeEEECCCCCEEEEEeHHHHHHHHHh
Confidence 1356888888889999999999999999999999999999998999999999999998765
No 63
>2d4z_A Chloride channel protein; CLC chloride channel cytoplasmic domain, CBS domains, ION CH regulatory subunit, transport protein; 3.10A {Torpedo marmorata} SCOP: d.37.1.1
Probab=99.48 E-value=3.3e-14 Score=129.73 Aligned_cols=125 Identities=14% Similarity=0.046 Sum_probs=102.4
Q ss_pred cccccccccccccCcceEEEeCCCCccHHHHHHHHhcCCcEEeeEcCC-CCceeEEeEhhhhccccccc-----------
Q 018729 202 ELTEKTAKDAMTPISKAFSLDLDATLTLDTLNAIMTMGHSRVPVYSGN-PTNIIGLILVKNLLSVDYRD----------- 269 (351)
Q Consensus 202 ~l~~~~v~~iMtpr~~v~~v~~~~t~~~e~~~~~~~~~~sr~PV~~~~-~d~ivGiv~~kdll~~~~~~----------- 269 (351)
...+++|+|+|++ +++++.+++++. ++.+.+.+++++++||++++ .++++|+|+.+||+......
T Consensus 9 ~~~~~~v~diMt~--~vvtv~~~~tv~-~~~~lm~~~~~~~~PVVd~~~~~~LvGiIt~~dl~~~l~~~~~~~~~~~~~~ 85 (250)
T 2d4z_A 9 NKYNIQVGDIMVR--DVTSIASTSTYG-DLLHVLRQTKLKFFPFVDTPDTNTLLGSIDRTEVEGLLQRRISAYRRQPAAA 85 (250)
T ss_dssp CCSSCBTTSSSBS--SCCCEETTCBHH-HHHHHHHHCCCSEEEEESCTTTCBEEEEEEHHHHHHHHHHHHHTTSSSCCCC
T ss_pred ccCCCChHHhcCC--CCeEECCCCCHH-HHHHHHHhcCCCEEEEEecCCCCeEEEEEEHHHHHHHHHHhhhhhhhhhhhh
Confidence 3467899999986 789999999998 99999999999999999864 25799999999987531100
Q ss_pred --------------------------------------------------------------------------------
Q 018729 270 -------------------------------------------------------------------------------- 269 (351)
Q Consensus 270 -------------------------------------------------------------------------------- 269 (351)
T Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (250)
T 2d4z_A 86 AEADEEGRNGETGASFTGEAESSFAYIDQEDAEGQQREGLEAVKVQTEDPRPPSPVPAEEPTQTSGIYQKKQKGTGQVAS 165 (250)
T ss_dssp CCBCCC--------------------------------------------------------------------------
T ss_pred hcccccccccccccccccCCcceeeeccccccccccccCccccCCcccCCccccccccccccccccccccccccccccCc
Confidence
Q ss_pred -------------------cccc--c-ccccccCceeCCCCCHHHHHHHHhhCCceEEEEEecCCCcccccchhhhhccc
Q 018729 270 -------------------AVPL--R-KMIIRRIPRVSEDMPLYDILNEFQKGHSHIAVVYKDLNEKKEGELFKDNCKKP 327 (351)
Q Consensus 270 -------------------~~~l--~-~i~~~~~~~V~~~~~l~~lL~~~~~~~~~~aiVvDe~g~~~GiVT~~Dil~~l 327 (351)
+.++ . .+|...|+.|.+++++.++...|++.+.+.++|+| .|+++|+||++|+++++
T Consensus 166 ~~~~~i~~~~~~~~~~~~l~~~Vdl~~~~md~sP~tv~~~tsL~~v~~LF~~lglr~l~V~~-~GrLVGIVTrkDl~kai 244 (250)
T 2d4z_A 166 RFEEMLTLEEIYRWEQREKNVVVNFETCRIDQSPFQLVEGTSLQKTHTLFSLLGLDRAYVTS-MGKLVGVVALAEIQAAI 244 (250)
T ss_dssp -CCSCCBHHHHHHHHHHHTTCBCCTTSSCEECCSCCBCTTCBHHHHHHHHHHHTCSEEEEEE-TTEEEEEEEHHHHHHHH
T ss_pred ccccccChhhhhhHHHHhcCceeccccccccCCCeEECCCCcHHHHHHHHHHhCCeEEEEEE-CCEEEEEEEHHHHHHHH
Confidence 0011 1 13456677899999999999999999999999997 59999999999999988
Q ss_pred cCC
Q 018729 328 RGQ 330 (351)
Q Consensus 328 ~~~ 330 (351)
.+.
T Consensus 245 ~~~ 247 (250)
T 2d4z_A 245 EGS 247 (250)
T ss_dssp HC-
T ss_pred HHH
Confidence 653
No 64
>2qrd_G Protein C1556.08C; AMPK, ADP, ATP-binding, kinase, nucleotide-binding, serine/T protein kinase, transferase, CBS domain; HET: ADP ATP; 2.41A {Schizosaccharomyces pombe} PDB: 2qrc_G* 2qr1_G* 2qre_G* 2oox_G* 2ooy_G*
Probab=99.46 E-value=6.9e-14 Score=131.94 Aligned_cols=126 Identities=7% Similarity=0.073 Sum_probs=107.5
Q ss_pred ccccccc---ccccCcceEEEeCCCCccHHHHHHHHhcCCcEEeeEcCCCCceeEEeEhhhhcccccc-----ccccccc
Q 018729 204 TEKTAKD---AMTPISKAFSLDLDATLTLDTLNAIMTMGHSRVPVYSGNPTNIIGLILVKNLLSVDYR-----DAVPLRK 275 (351)
Q Consensus 204 ~~~~v~~---iMtpr~~v~~v~~~~t~~~e~~~~~~~~~~sr~PV~~~~~d~ivGiv~~kdll~~~~~-----~~~~l~~ 275 (351)
.+.++++ +|++ ++.+++.++++. ++++.+.+++++++||++++ ++++|+++.+|++....+ .+.++.+
T Consensus 180 ~~~~v~~l~~~m~~--~~~~v~~~~~~~-~~~~~m~~~~~~~~~Vvd~~-~~~~Giit~~dl~~~~~~~~~~~~~~~v~~ 255 (334)
T 2qrd_G 180 LRVPLNQMTIGTWS--NLATASMETKVY-DVIKMLAEKNISAVPIVNSE-GTLLNVYESVDVMHLIQDGDYSNLDLSVGE 255 (334)
T ss_dssp CCCBGGGSSCSBCS--SCCCBCTTSBHH-HHHHHHHHHTCSEEEEECTT-CBEEEEEETHHHHHHHTTSCGGGGGSBHHH
T ss_pred hhCcHHHhCCcccC--CceEECCCCcHH-HHHHHHHHcCCcEEEEEcCC-CcEEEEEEHHHHHHHhhccccccccCcHHH
Confidence 4577888 4864 668899999998 99999999999999999865 799999999999875432 1356777
Q ss_pred cccc------cCceeCCCCCHHHHHHHHhhCCceEEEEEecCCCcccccchhhhhccccCCCCC
Q 018729 276 MIIR------RIPRVSEDMPLYDILNEFQKGHSHIAVVYKDLNEKKEGELFKDNCKKPRGQPEK 333 (351)
Q Consensus 276 i~~~------~~~~V~~~~~l~~lL~~~~~~~~~~aiVvDe~g~~~GiVT~~Dil~~l~~~~~~ 333 (351)
+|.+ +++++++++++.++++.|.+++.+.++|+|++|+++|+||..|+++.+.+....
T Consensus 256 ~m~~~~~~~~~~~~v~~~~~l~~~~~~m~~~~~~~l~Vvd~~g~l~Giit~~dil~~~~~~~~~ 319 (334)
T 2qrd_G 256 ALLKRPANFDGVHTCRATDRLDGIFDAIKHSRVHRLFVVDENLKLEGILSLADILNYIIYDKTT 319 (334)
T ss_dssp HHTTCCTTCCCCCEECTTCBHHHHHHHHHHSCCCEEEEECTTCBEEEEEEHHHHHHHHHSCCC-
T ss_pred HHhcccccCCCCEEECCCCcHHHHHHHHHHcCCCEEEEECCCCeEEEEEeHHHHHHHHHhcccc
Confidence 7653 789999999999999999999999999999999999999999999988776543
No 65
>2v8q_E 5'-AMP-activated protein kinase subunit gamma-1; phosphorylation, nucleotide-binding, serine/threonine-protei kinase, magnesium, CBS domain; HET: AMP; 2.10A {Rattus norvegicus} SCOP: d.37.1.1 d.37.1.1 PDB: 2v92_E* 2v9j_E* 2y8l_E* 2y8q_E* 2y94_E* 2ya3_E*
Probab=99.43 E-value=2e-13 Score=128.67 Aligned_cols=124 Identities=13% Similarity=0.114 Sum_probs=105.1
Q ss_pred ccccccc--cccCcceEEEeCCCCccHHHHHHHHhcCCcEEeeEcCCCCceeEEeEhhhhccccccc-----cccccccc
Q 018729 205 EKTAKDA--MTPISKAFSLDLDATLTLDTLNAIMTMGHSRVPVYSGNPTNIIGLILVKNLLSVDYRD-----AVPLRKMI 277 (351)
Q Consensus 205 ~~~v~~i--Mtpr~~v~~v~~~~t~~~e~~~~~~~~~~sr~PV~~~~~d~ivGiv~~kdll~~~~~~-----~~~l~~i~ 277 (351)
..+++++ |+ ..++.++++++++. ++++.+.+++++++||++++ ++++|+++.+|++....++ +.++.+++
T Consensus 189 ~~~v~~~~v~~-~~~~~~v~~~~~l~-~~~~~m~~~~~~~~~Vvd~~-~~l~Giit~~dl~~~~~~~~~~~~~~~v~~~~ 265 (330)
T 2v8q_E 189 SKSLEELQIGT-YANIAMVRTTTPVY-VALGIFVQHRVSALPVVDEK-GRVVDIYSKFDVINLAAEKTYNNLDVSVTKAL 265 (330)
T ss_dssp GSBHHHHTCSB-CSSCCCEETTCBHH-HHHHHHHHHCCSEEEEECTT-SBEEEEEEGGGTGGGGGSSCCCCCSSBHHHHG
T ss_pred cCCHHHhcccC-cCCceEECCCCCHH-HHHHHHHHcCCCeEEEECCC-CcEEEEEEHHHHHHHHhccccccccCcHHHHH
Confidence 3456666 43 25678899999998 99999999999999999865 8999999999998765432 34666764
Q ss_pred ------cccCceeCCCCCHHHHHHHHhhCCceEEEEEecCCCcccccchhhhhccccCCC
Q 018729 278 ------IRRIPRVSEDMPLYDILNEFQKGHSHIAVVYKDLNEKKEGELFKDNCKKPRGQP 331 (351)
Q Consensus 278 ------~~~~~~V~~~~~l~~lL~~~~~~~~~~aiVvDe~g~~~GiVT~~Dil~~l~~~~ 331 (351)
.+++.++++++++.++++.|.+++.+.++|+|++|+++|+||..|+++.+..+.
T Consensus 266 ~~~~~~~~~~~~v~~~~~l~~a~~~m~~~~~~~l~Vvd~~g~l~Giit~~Dil~~~~~~~ 325 (330)
T 2v8q_E 266 QHRSHYFEGVLKCYLHETLEAIINRLVEAEVHRLVVVDEHDVVKGIVSLSDILQALVLTG 325 (330)
T ss_dssp GGCCSCCCSCCEECTTSBHHHHHHHHHHHTCSEEEEECTTSBEEEEEEHHHHHHHHHSSC
T ss_pred hccccccCCCeEECCCCcHHHHHHHHHHCCCcEEEEEcCCCcEEEEEeHHHHHHHHHhhc
Confidence 378899999999999999999999999999999999999999999999886643
No 66
>1vrd_A Inosine-5'-monophosphate dehydrogenase; TM1347, structural G joint center for structural genomics, JCSG, protein structu initiative, PSI; 2.18A {Thermotoga maritima} SCOP: c.1.5.1
Probab=99.33 E-value=1.7e-13 Score=136.82 Aligned_cols=129 Identities=9% Similarity=0.113 Sum_probs=13.0
Q ss_pred HHHHHHHhhhcccccccccccccCcceEEEeCCCCccHHHHHHHHhcCCcEEeeEcCCCCceeEEeEhhhhccccccccc
Q 018729 192 DETTIIAGALELTEKTAKDAMTPISKAFSLDLDATLTLDTLNAIMTMGHSRVPVYSGNPTNIIGLILVKNLLSVDYRDAV 271 (351)
Q Consensus 192 ~e~~~i~~vl~l~~~~v~~iMtpr~~v~~v~~~~t~~~e~~~~~~~~~~sr~PV~~~~~d~ivGiv~~kdll~~~~~~~~ 271 (351)
++++.+.++.. ++++|++ +++++++++++. ++++.+.+++++.+||++++ ++++|+|+.+|++.. .+.+.
T Consensus 86 ~~~~~v~~v~~-----~~~iM~~--~~~~v~~~~tv~-ea~~~m~~~~~~~~pVvd~~-~~lvGivt~~Dl~~~-~~~~~ 155 (494)
T 1vrd_A 86 EQARQVSIVKK-----TENGIIY--DPITVTPDMTVK-EAIDLMAEYKIGGLPVVDEE-GRLVGLLTNRDVRFE-KNLSK 155 (494)
T ss_dssp HHHHHHHHHHT-----C---------------------------------------------------------------
T ss_pred HHHHHHHhhhh-----HhhcCcc--CCeEECCCCCHH-HHHHHHHHcCceEEEEEcCC-CEEEEEEEHHHHHhh-cCCCC
Confidence 34556666654 5778986 678999999998 99999999999999999865 799999999999763 22346
Q ss_pred cccccccc--cCceeCCCCCHHHHHHHHhhCCceEEEEEecCCCcccccchhhhhccccCC
Q 018729 272 PLRKMIIR--RIPRVSEDMPLYDILNEFQKGHSHIAVVYKDLNEKKEGELFKDNCKKPRGQ 330 (351)
Q Consensus 272 ~l~~i~~~--~~~~V~~~~~l~~lL~~~~~~~~~~aiVvDe~g~~~GiVT~~Dil~~l~~~ 330 (351)
++.++|.+ ++.++++++++.++++.|++++.+..+|||++|+++|+||..|+++.+...
T Consensus 156 ~v~~im~~~~~~~~v~~~~~l~ea~~~m~~~~~~~lpVVd~~g~lvGiIt~~Dll~~~~~~ 216 (494)
T 1vrd_A 156 KIKDLMTPREKLIVAPPDISLEKAKEILHQHRIEKLPLVSKDNKLVGLITIKDIMSVIEHP 216 (494)
T ss_dssp -----------------------------------------------------CHHHHTCT
T ss_pred cHHHHhCCCCCCeEECCCCCHHHHHHHHHHcCCcEEEEEcCCCeEEEEEEHHHHHhhhccc
Confidence 78898766 889999999999999999999999999999999999999999999987665
No 67
>1jcn_A Inosine monophosphate dehydrogenase I; IMPD, IMPDH, guanine nucleotide synthesis, oxidoreductase; HET: CPR; 2.50A {Homo sapiens} SCOP: c.1.5.1 d.37.1.1 PDB: 1jr1_A* 1nf7_A* 1b3o_A* 1nfb_A*
Probab=99.25 E-value=6.9e-13 Score=133.09 Aligned_cols=120 Identities=14% Similarity=0.163 Sum_probs=71.6
Q ss_pred ccccccccCcceEEEeCCCCccHHHHHHHHhcCCcEEeeEcCC--CCceeEEeEhhhhccccc-cccccccccccc--cC
Q 018729 207 TAKDAMTPISKAFSLDLDATLTLDTLNAIMTMGHSRVPVYSGN--PTNIIGLILVKNLLSVDY-RDAVPLRKMIIR--RI 281 (351)
Q Consensus 207 ~v~~iMtpr~~v~~v~~~~t~~~e~~~~~~~~~~sr~PV~~~~--~d~ivGiv~~kdll~~~~-~~~~~l~~i~~~--~~ 281 (351)
+++++|++ +.+++++++++. ++++.+.+++++++||++++ .++++|+|+.+|+..... ..+.++.++|.+ ++
T Consensus 109 ~~~~im~~--~~~~v~~~~tv~-ea~~~m~~~~~~~~pVvd~~~~~~~lvGiVt~~Dl~~~~~~~~~~~v~~vm~~~~~~ 185 (514)
T 1jcn_A 109 NFEQGFIT--DPVVLSPSHTVG-DVLEAKMRHGFSGIPITETGTMGSKLVGIVTSRDIDFLAEKDHTTLLSEVMTPRIEL 185 (514)
T ss_dssp TCCTTSCS--SCCCCCC------------------CEESCC--------CCEECTTTTC----------------CCBCC
T ss_pred hhhhcccc--CCEEECCCCCHH-HHHHHHHhcCCCEEEEEeCCCcCCEEEEEEEHHHHHhhhhccCCCCHHHHhCCCCCC
Confidence 68899986 567899999998 99999999999999999863 379999999999976421 234678888766 78
Q ss_pred ceeCCCCCHHHHHHHHhhCCceEEEEEecCCCcccccchhhhhccccC
Q 018729 282 PRVSEDMPLYDILNEFQKGHSHIAVVYKDLNEKKEGELFKDNCKKPRG 329 (351)
Q Consensus 282 ~~V~~~~~l~~lL~~~~~~~~~~aiVvDe~g~~~GiVT~~Dil~~l~~ 329 (351)
+++++++++.++++.|.+++.+.++|||++|+++|+||+.|+++.+..
T Consensus 186 ~tv~~~~~l~ea~~~m~~~~~~~lpVVd~~g~lvGiIt~~Dll~~~~~ 233 (514)
T 1jcn_A 186 VVAPAGVTLKEANEILQRSKKGKLPIVNDCDELVAIIARTDLKKNRDY 233 (514)
T ss_dssp CCEETTCCSTTTTTHHHHHTCSCCCEESSSSCCC----CCCCSSCCCC
T ss_pred eEECCCCCHHHHHHHHHHcCCCcccEECCCCeEEEEEEHHHHHHHhhC
Confidence 999999999999999999999999999999999999999999988754
No 68
>4af0_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase, GTP biosynthesis, drug resistance; HET: MOA IMP; 2.20A {Cryptococcus neoformans} PDB: 4af0_B*
Probab=99.13 E-value=8.8e-12 Score=122.69 Aligned_cols=128 Identities=12% Similarity=0.186 Sum_probs=10.5
Q ss_pred HHHHHHHHhhhcccccccccccccCcceEEEeCCCCccHHHHHHHHhcCCcEEeeEcCC--CCceeEEeEhhhhcccccc
Q 018729 191 HDETTIIAGALELTEKTAKDAMTPISKAFSLDLDATLTLDTLNAIMTMGHSRVPVYSGN--PTNIIGLILVKNLLSVDYR 268 (351)
Q Consensus 191 ~~e~~~i~~vl~l~~~~v~~iMtpr~~v~~v~~~~t~~~e~~~~~~~~~~sr~PV~~~~--~d~ivGiv~~kdll~~~~~ 268 (351)
++|.++++.+-.+++ .|+. +.+++.++.++. |+++++.++++|.+||.++. .++++|||+-+|+... +
T Consensus 128 e~Qa~~V~~VKr~e~-----g~i~--dPvtl~P~~Tv~-da~~l~~~~~isgvpVvd~g~~~~kLvGIvT~RD~rf~--d 197 (556)
T 4af0_A 128 EEQAAMVRRVKKYEN-----GFIT--DPLCLGPDATVG-DVLEIKAKFGFCGVPITETGEPDSKLLGIVTGRDVQFQ--D 197 (556)
T ss_dssp HHHHHHHHHHHHCCC-----------------------------------------------------------------
T ss_pred HHHHHHHHHHHhccc-----CccC--CCeEcCCCCCHH-HHHHHHHHhCCCccccccccCcCCEEEEEEeccccccc--c
Confidence 456788888876654 3432 458899999998 99999999999999999852 3689999999998653 3
Q ss_pred ccccccccccccCceeCCCCCHHHHHHHHhhCCceEEEEEecCCCcccccchhhhhcccc
Q 018729 269 DAVPLRKMIIRRIPRVSEDMPLYDILNEFQKGHSHIAVVYKDLNEKKEGELFKDNCKKPR 328 (351)
Q Consensus 269 ~~~~l~~i~~~~~~~V~~~~~l~~lL~~~~~~~~~~aiVvDe~g~~~GiVT~~Dil~~l~ 328 (351)
.+.+++++|..++++++++.+++++.+.|++++..-++|||++|+++|+||++|+.+.-.
T Consensus 198 ~~~~V~evMT~~lvt~~~~~~leeA~~iL~~~kieklpVVd~~g~LvGlIT~kDi~k~~~ 257 (556)
T 4af0_A 198 AETPIKSVMTTEVVTGSSPITLEKANSLLRETKKGKLPIVDSNGHLVSLVARSDLLKNQN 257 (556)
T ss_dssp ------------------------------------------------------------
T ss_pred cceEhhhhcccceEEecCCCCHHHHHHHHHHccccceeEEccCCcEEEEEEechhhhhhh
Confidence 456899998888999999999999999999999999999999999999999999987653
No 69
>1vr9_A CBS domain protein/ACT domain protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: MSE; 1.70A {Thermotoga maritima} SCOP: d.37.1.1
Probab=98.61 E-value=5.5e-09 Score=92.46 Aligned_cols=103 Identities=12% Similarity=0.139 Sum_probs=52.4
Q ss_pred cccccccccCcceEEEeCCCCccHHHHHHHHhcCCcEEeeEcCCCCceeEEeEhhhhccccccccccccccccccCc-ee
Q 018729 206 KTAKDAMTPISKAFSLDLDATLTLDTLNAIMTMGHSRVPVYSGNPTNIIGLILVKNLLSVDYRDAVPLRKMIIRRIP-RV 284 (351)
Q Consensus 206 ~~v~~iMtpr~~v~~v~~~~t~~~e~~~~~~~~~~sr~PV~~~~~d~ivGiv~~kdll~~~~~~~~~l~~i~~~~~~-~V 284 (351)
.+++++|++ ++.++++++++. ++++.+.+++++++||++++ ++++|+++.+|++...... ....+.+.+-.+ ..
T Consensus 72 ~~v~~im~~--~~~~v~~~~~l~-~a~~~m~~~~~~~lpVvd~~-g~lvGiit~~Dil~~~~~~-~~~~~~~~~l~~~~~ 146 (213)
T 1vr9_A 72 SSVFNKVSL--PDFFVHEEDNIT-HALLLFLEHQEPYLPVVDEE-MRLKGAVSLHDFLEALIEA-LAMDVPGIRFSVLLE 146 (213)
T ss_dssp SBSGGGCBC--TTCCEETTSBHH-HHHHHHHHCCCSEEEEECTT-CBEEEEEEHHHHHHHHHHS-CC-------------
T ss_pred CcHHHHccC--CCEEECCCCcHH-HHHHHHHHhCCCEEEEEcCC-CEEEEEEEHHHHHHHHHHH-hcCCCCcEEEEEEeC
Confidence 469999987 568899999998 99999999999999999875 8999999999998754321 112222111111 11
Q ss_pred CCCCCHHHHHHHHhhCCceEEEEEecCCC
Q 018729 285 SEDMPLYDILNEFQKGHSHIAVVYKDLNE 313 (351)
Q Consensus 285 ~~~~~l~~lL~~~~~~~~~~aiVvDe~g~ 313 (351)
....++.++.+.|.+++.+..+|++.+|.
T Consensus 147 ~~~~~l~~~~~~l~~~~~~~l~V~~~~~~ 175 (213)
T 1vr9_A 147 DKPGELRKVVDALALSNINILSVITTRSG 175 (213)
T ss_dssp -----------------------------
T ss_pred CCCccHHHHHHHHHHCCCcEEEEEEEecC
Confidence 33345899999999999999988766554
No 70
>3ghd_A A cystathionine beta-synthase domain protein FUSE ribbon-like domain; PF1953,APC40009,cystathionine beta-synthase domain protein; 1.81A {Pyrococcus furiosus}
Probab=98.49 E-value=1.7e-07 Score=68.02 Aligned_cols=65 Identities=14% Similarity=0.285 Sum_probs=52.9
Q ss_pred ceEEEeCCCCccHHHHHHHHhcCCcEEeeEcCCCCceeEEeEhhhhccccc-c----ccccccccccccCcee
Q 018729 217 KAFSLDLDATLTLDTLNAIMTMGHSRVPVYSGNPTNIIGLILVKNLLSVDY-R----DAVPLRKMIIRRIPRV 284 (351)
Q Consensus 217 ~v~~v~~~~t~~~e~~~~~~~~~~sr~PV~~~~~d~ivGiv~~kdll~~~~-~----~~~~l~~i~~~~~~~V 284 (351)
+++++++++++. ++.+.|.+++++.+||.++ |+++|+++-+|+++... + .+.+++++|.+++.+|
T Consensus 1 k~vtv~p~~tv~-ea~~~M~~~~i~~~~V~d~--~~lvGIvT~~Di~~~~~~~~~~~~~~~V~~iMt~~~iTV 70 (70)
T 3ghd_A 1 KAIVVQPKDTVD-RVAKILSRNKAGSAVVMEG--DEILGVVTERDILDKVVAKGKNPKEVKVEEIMTKNPVKI 70 (70)
T ss_dssp CEEEECTTCBHH-HHHHHHHHTTCSEEEEEET--TEEEEEEEHHHHHHHTTTTTCCGGGCBGGGTCEECTTCC
T ss_pred CCEEECCCCcHH-HHHHHHHHcCCCEEEEEEC--CEEEEEEEHHHHHHHHHhcCCCcccCCHHHhcCCCCeEC
Confidence 357899999998 9999999999999999974 79999999999975322 1 2357888877777653
No 71
>3fio_A A cystathionine beta-synthase domain protein fused to A Zn-ribbon-like domain; PF1953,APC40009,cystathionine beta-synthase domain protein; 1.81A {Pyrococcus furiosus} PDB: 3ghd_A
Probab=98.46 E-value=2.2e-07 Score=66.57 Aligned_cols=63 Identities=13% Similarity=0.244 Sum_probs=51.4
Q ss_pred eEEEeCCCCccHHHHHHHHhcCCcEEeeEcCCCCceeEEeEhhhhcccccc-----ccccccccccccCce
Q 018729 218 AFSLDLDATLTLDTLNAIMTMGHSRVPVYSGNPTNIIGLILVKNLLSVDYR-----DAVPLRKMIIRRIPR 283 (351)
Q Consensus 218 v~~v~~~~t~~~e~~~~~~~~~~sr~PV~~~~~d~ivGiv~~kdll~~~~~-----~~~~l~~i~~~~~~~ 283 (351)
++++++++++. ++++.+.+++++++||+++ ++++|+++.+|+++.... .+.+++++|.+++.+
T Consensus 2 ~~~v~~~~~~~-~a~~~m~~~~~~~~pV~d~--~~l~Givt~~dl~~~~~~~~~~~~~~~v~~im~~~~~~ 69 (70)
T 3fio_A 2 AIVVQPKDTVD-RVAKILSRNKAGSAVVMEG--DEILGVVTERDILDKVVAKGKNPKEVKVEEIMTKNPVK 69 (70)
T ss_dssp EEEECTTCBHH-HHHHHHHHTTCSEEEEEET--TEEEEEEEHHHHHHHTTTTTCCGGGCBGGGTCEECTTC
T ss_pred CeEECCCCcHH-HHHHHHHHcCCCEEEEEEC--CEEEEEEEHHHHHHHHHHcCCCcccCCHHHhcCCCCeE
Confidence 57899999998 9999999999999999985 899999999999875322 245688886555543
No 72
>3l2b_A Probable manganase-dependent inorganic pyrophosphatase; family II, CBS domain, bateman domain, AP4A, diadenosine polyphosphate, DRTGG; HET: B4P; 2.27A {Clostridium perfringens} PDB: 3l31_A*
Probab=98.37 E-value=1.7e-07 Score=84.24 Aligned_cols=60 Identities=20% Similarity=0.240 Sum_probs=50.0
Q ss_pred cccccccccccCcceEEEeCCCCccHHHHHHHHhcCCcEEeeEcCCCCceeEEeEhhhhcccc
Q 018729 204 TEKTAKDAMTPISKAFSLDLDATLTLDTLNAIMTMGHSRVPVYSGNPTNIIGLILVKNLLSVD 266 (351)
Q Consensus 204 ~~~~v~~iMtpr~~v~~v~~~~t~~~e~~~~~~~~~~sr~PV~~~~~d~ivGiv~~kdll~~~ 266 (351)
...+++++|+| .++.++++++++. ++++.+.+++++++||++++ |+++|+++.+|+++..
T Consensus 183 ~~~~v~~im~~-~~~~~~~~~~~~~-~~~~~m~~~~~~~~pVvd~~-~~~~Giit~~dll~~~ 242 (245)
T 3l2b_A 183 QSLPVDYVMTK-DNLVAVSTDDLVE-DVKVTMSETRYSNYPVIDEN-NKVVGSIARFHLISTH 242 (245)
T ss_dssp GGSBHHHHSBC-TTCCCEETTSBHH-HHHHHHHHHCCSEEEEECTT-CBEEEEEECC------
T ss_pred cCCceeeEecC-CccEEECCCCcHH-HHHHHHHhcCCceEEEEcCC-CeEEEEEEHHHhhchh
Confidence 45789999998 7788999999998 99999999999999999876 8999999999998753
No 73
>4esy_A CBS domain containing membrane protein; structural genomics, PSI-biology; 2.01A {Sphaerobacter thermophilus}
Probab=98.32 E-value=5.6e-07 Score=76.19 Aligned_cols=60 Identities=17% Similarity=0.089 Sum_probs=55.4
Q ss_pred cccccccccccCceeCCCCCHHHHHHHHhhCCceEEEEEecCCCcccccchhhhhccccC
Q 018729 270 AVPLRKMIIRRIPRVSEDMPLYDILNEFQKGHSHIAVVYKDLNEKKEGELFKDNCKKPRG 329 (351)
Q Consensus 270 ~~~l~~i~~~~~~~V~~~~~l~~lL~~~~~~~~~~aiVvDe~g~~~GiVT~~Dil~~l~~ 329 (351)
+.+++++|.+++.++++++++.++++.|.+++.+.++|+|++|+++|+||..|+++.+..
T Consensus 17 ~~~V~diM~~~v~~v~~~~tl~~a~~~m~~~~~~~~pVvd~~g~lvGiit~~Dll~~~~~ 76 (170)
T 4esy_A 17 QVPIRDILTSPVVTVREDDTLDAVAKTMLEHQIGCAPVVDQNGHLVGIITESDFLRGSIP 76 (170)
T ss_dssp TSBGGGGCCSCCCCEETTSBHHHHHHHHHHTTCSEEEEECTTSCEEEEEEGGGGGGGTCC
T ss_pred CCCHHHhcCCCCcEECCcCcHHHHHHHHHHcCCeEEEEEcCCccEEEEEEHHHHHHHHhh
Confidence 467899988999999999999999999999999999999999999999999999886543
No 74
>4fry_A Putative signal-transduction protein with CBS DOM; CBS domain,ssgcid, structural genomics, niaid; HET: NAD AMP; 2.10A {Burkholderia ambifaria}
Probab=98.17 E-value=1.3e-06 Score=72.61 Aligned_cols=61 Identities=16% Similarity=0.268 Sum_probs=53.9
Q ss_pred ccccccccccccCcceEEEeCCCCccHHHHHHHHhcCCcEEeeEcCCCCceeEEeEhhhhcccccc
Q 018729 203 LTEKTAKDAMTPISKAFSLDLDATLTLDTLNAIMTMGHSRVPVYSGNPTNIIGLILVKNLLSVDYR 268 (351)
Q Consensus 203 l~~~~v~~iMtpr~~v~~v~~~~t~~~e~~~~~~~~~~sr~PV~~~~~d~ivGiv~~kdll~~~~~ 268 (351)
..+.+++++|++ ++.+++.++++. ++++.+.+++++++||++ + |+++|+++.+|++....+
T Consensus 75 ~~~~~v~~~m~~--~~~~v~~~~~l~-~~~~~m~~~~~~~lpVvd-~-g~~~Giit~~dil~~l~~ 135 (157)
T 4fry_A 75 SKATRVEEIMTA--KVRYVEPSQSTD-ECMALMTEHRMRHLPVLD-G-GKLIGLISIGDLVKSVIA 135 (157)
T ss_dssp SSSCBHHHHSBS--SCCCBCTTSBHH-HHHHHHHHHTCSEEEEEE-T-TEEEEEEEHHHHHHHHHT
T ss_pred ccccCHHHHcCC--CCcEECCCCcHH-HHHHHHHHcCCCEEEEEE-C-CEEEEEEEHHHHHHHHHH
Confidence 357899999987 568899999998 999999999999999998 4 899999999999986543
No 75
>3fv6_A YQZB protein; CBS domain dimer, metabolism regulator, central glycolytic G regulator, transcription; 1.95A {Bacillus subtilis} PDB: 3fwr_A* 3fws_A*
Probab=98.13 E-value=1.8e-06 Score=72.08 Aligned_cols=62 Identities=16% Similarity=0.205 Sum_probs=55.6
Q ss_pred ccccccccccccCcceEEEeCCCCccHHHHHHHHhcCCcEEeeEcCCCC---ceeEEeEhhhhcccc
Q 018729 203 LTEKTAKDAMTPISKAFSLDLDATLTLDTLNAIMTMGHSRVPVYSGNPT---NIIGLILVKNLLSVD 266 (351)
Q Consensus 203 l~~~~v~~iMtpr~~v~~v~~~~t~~~e~~~~~~~~~~sr~PV~~~~~d---~ivGiv~~kdll~~~ 266 (351)
..+.+++++|+++.++.++++++++. ++++.+.+++++++||++++ + +++|+|+.+|++...
T Consensus 78 ~~~~~v~~~m~~~~~~~~v~~~~~l~-~a~~~m~~~~~~~lpVvd~~-g~~~~~vGiit~~dil~~l 142 (159)
T 3fv6_A 78 LTSVPVHIIMTRMPNITVCRREDYVM-DIAKHLIEKQIDALPVIKDT-DKGFEVIGRVTKTNMTKIL 142 (159)
T ss_dssp TTTCBGGGTSEETTSCCCBCTTSBHH-HHHHHHHHHTCSEEEEEEEC-SSSEEEEEEEEHHHHHHHH
T ss_pred ccCcCHHHHHcCCCCcEEECCCCCHH-HHHHHHHHcCCcEEEEEeCC-CcceeEEEEEEHHHHHHHH
Confidence 46789999999877788999999998 99999999999999999865 5 899999999998754
No 76
>3fio_A A cystathionine beta-synthase domain protein fused to A Zn-ribbon-like domain; PF1953,APC40009,cystathionine beta-synthase domain protein; 1.81A {Pyrococcus furiosus} PDB: 3ghd_A
Probab=98.09 E-value=2.1e-06 Score=61.30 Aligned_cols=50 Identities=14% Similarity=0.044 Sum_probs=45.7
Q ss_pred cCceeCCCCCHHHHHHHHhhCCceEEEEEecCCCcccccchhhhhccccCC
Q 018729 280 RIPRVSEDMPLYDILNEFQKGHSHIAVVYKDLNEKKEGELFKDNCKKPRGQ 330 (351)
Q Consensus 280 ~~~~V~~~~~l~~lL~~~~~~~~~~aiVvDe~g~~~GiVT~~Dil~~l~~~ 330 (351)
++.++++++++.++++.|++++.+.++|+|+ |+++|+||..|+++.+...
T Consensus 1 ~~~~v~~~~~~~~a~~~m~~~~~~~~pV~d~-~~l~Givt~~dl~~~~~~~ 50 (70)
T 3fio_A 1 KAIVVQPKDTVDRVAKILSRNKAGSAVVMEG-DEILGVVTERDILDKVVAK 50 (70)
T ss_dssp CEEEECTTCBHHHHHHHHHHTTCSEEEEEET-TEEEEEEEHHHHHHHTTTT
T ss_pred CCeEECCCCcHHHHHHHHHHcCCCEEEEEEC-CEEEEEEEHHHHHHHHHHc
Confidence 3568999999999999999999999999998 9999999999999987653
No 77
>3kpb_A Uncharacterized protein MJ0100; CBS domain, S-adenosylmethionine, conformational change, unknown function; HET: SAM; 1.60A {Methanocaldococcus jannaschii} SCOP: d.37.1.0 PDB: 3kpd_A* 3kpc_A*
Probab=98.09 E-value=3.6e-06 Score=66.57 Aligned_cols=59 Identities=17% Similarity=0.276 Sum_probs=52.0
Q ss_pred cccccccccccCcceEEEeCCCCccHHHHHHHHhcCCcEEeeEcCCCCceeEEeEhhhhcccc
Q 018729 204 TEKTAKDAMTPISKAFSLDLDATLTLDTLNAIMTMGHSRVPVYSGNPTNIIGLILVKNLLSVD 266 (351)
Q Consensus 204 ~~~~v~~iMtpr~~v~~v~~~~t~~~e~~~~~~~~~~sr~PV~~~~~d~ivGiv~~kdll~~~ 266 (351)
...+++++|.+ ++.++++++++. ++++.+.+++.+++||++++ |+++|+++.+|++...
T Consensus 60 ~~~~v~~~~~~--~~~~v~~~~~l~-~~~~~~~~~~~~~l~Vvd~~-g~~~Givt~~dl~~~l 118 (122)
T 3kpb_A 60 NKKTIEEIMTR--NVITAHEDEPVD-HVAIKMSKYNISGVPVVDDY-RRVVGIVTSEDISRLF 118 (122)
T ss_dssp TCCBGGGTSBS--SCCCEETTSBHH-HHHHHHHHHTCSEEEEECTT-CBEEEEEEHHHHHHHH
T ss_pred cccCHHHHhcC--CCeEECCCCCHH-HHHHHHHHhCCCeEEEECCC-CCEEEEEeHHHHHHHh
Confidence 34489999987 567899999998 99999999999999999875 8999999999998754
No 78
>1pbj_A Hypothetical protein; structural genomics, domain, PSI, protein structure initiative; 1.40A {Methanothermobacter thermautotrophicusdelta H} SCOP: d.37.1.1
Probab=98.07 E-value=2.1e-06 Score=68.09 Aligned_cols=60 Identities=20% Similarity=0.287 Sum_probs=53.3
Q ss_pred cccccccccccccCcceEEEeCCCCccHHHHHHHHhcCCcEEeeEcCCCCceeEEeEhhhhcccc
Q 018729 202 ELTEKTAKDAMTPISKAFSLDLDATLTLDTLNAIMTMGHSRVPVYSGNPTNIIGLILVKNLLSVD 266 (351)
Q Consensus 202 ~l~~~~v~~iMtpr~~v~~v~~~~t~~~e~~~~~~~~~~sr~PV~~~~~d~ivGiv~~kdll~~~ 266 (351)
.+.+.+++++|+| ++.++++++++. ++++.+.+++++++||+++ ++++|+++.+|++...
T Consensus 61 ~~~~~~v~~~m~~--~~~~v~~~~~l~-~~~~~~~~~~~~~l~Vvd~--~~~~Gvit~~dl~~~l 120 (125)
T 1pbj_A 61 DLAEVKVWEVMER--DLVTISPRATIK-EAAEKMVKNVVWRLLVEED--DEIIGVISATDILRAK 120 (125)
T ss_dssp CTTTSBHHHHCBC--GGGEECTTSCHH-HHHHHHHHHTCSEEEEEET--TEEEEEEEHHHHHHHH
T ss_pred cccccCHHHHcCC--CCeEECCCCCHH-HHHHHHHhcCCcEEEEEEC--CEEEEEEEHHHHHHHH
Confidence 3457889999987 668899999998 9999999999999999986 8999999999998754
No 79
>3lfr_A Putative metal ION transporter; CBS, AMP, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: AMP; 1.53A {Pseudomonas syringae}
Probab=98.04 E-value=3.8e-06 Score=68.27 Aligned_cols=60 Identities=15% Similarity=0.133 Sum_probs=52.3
Q ss_pred ccccccccccccCcceEEEeCCCCccHHHHHHHHhcCCcEEeeEcCCCCceeEEeEhhhhccccc
Q 018729 203 LTEKTAKDAMTPISKAFSLDLDATLTLDTLNAIMTMGHSRVPVYSGNPTNIIGLILVKNLLSVDY 267 (351)
Q Consensus 203 l~~~~v~~iMtpr~~v~~v~~~~t~~~e~~~~~~~~~~sr~PV~~~~~d~ivGiv~~kdll~~~~ 267 (351)
..+.+++++|+| +.++++++++. ++++.|.+++..++||++++ |+++|+++.+|++....
T Consensus 67 ~~~~~v~~~m~~---~~~v~~~~~l~-~~~~~m~~~~~~~~~Vvd~~-g~lvGiit~~Dil~~l~ 126 (136)
T 3lfr_A 67 GDSDDVKKLLRP---ATFVPESKRLN-VLLREFRANHNHMAIVIDEY-GGVAGLVTIEDVLEQIV 126 (136)
T ss_dssp GGGCCGGGTCBC---CCEEETTCBHH-HHHHHHHHHTCCEEEEECTT-SCEEEEEEHHHHHTTC-
T ss_pred CCCcCHHHHcCC---CeEECCCCcHH-HHHHHHHhcCCeEEEEEeCC-CCEEEEEEHHHHHHHHh
Confidence 356789999965 57899999998 99999999999999999875 89999999999987653
No 80
>3gby_A Uncharacterized protein CT1051; CBS domain, structural genomics, PSI-2, protein structure initiative; HET: EPE; 1.66A {Chlorobium tepidum tls}
Probab=98.02 E-value=3.9e-06 Score=67.24 Aligned_cols=59 Identities=10% Similarity=0.012 Sum_probs=54.2
Q ss_pred cccccccccccCceeCCCCCHHHHHHHHhhCCceEEEEEecCCCcccccchhhhhccccC
Q 018729 270 AVPLRKMIIRRIPRVSEDMPLYDILNEFQKGHSHIAVVYKDLNEKKEGELFKDNCKKPRG 329 (351)
Q Consensus 270 ~~~l~~i~~~~~~~V~~~~~l~~lL~~~~~~~~~~aiVvDe~g~~~GiVT~~Dil~~l~~ 329 (351)
+.+++++|.++++++++++++.++++.|++++.+.++|+|+ |+++|+||..|+.+.+..
T Consensus 4 s~~v~~~m~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~-~~~~Givt~~dl~~~~~~ 62 (128)
T 3gby_A 4 SVTFSYLAETDYPVFTLGGSTADAARRLAASGCACAPVLDG-ERYLGMVHLSRLLEGRKG 62 (128)
T ss_dssp TCBGGGGCBCCSCCEETTSBHHHHHHHHHHHTCSEEEEEET-TEEEEEEEHHHHHTTCSS
T ss_pred ceEHHHhhcCCcceECCCCCHHHHHHHHHHCCCcEEEEEEC-CEEEEEEEHHHHHHHHhh
Confidence 45788988889999999999999999999999999999999 999999999999987654
No 81
>1pvm_A Conserved hypothetical protein TA0289; structural genomics, CBS domain, PSI, protein structure initiative; 1.50A {Thermoplasma acidophilum dsm 1728} SCOP: d.37.1.1 g.41.13.1 PDB: 2qh1_A
Probab=98.02 E-value=9.7e-06 Score=69.34 Aligned_cols=61 Identities=15% Similarity=0.156 Sum_probs=54.0
Q ss_pred ccccccccccccCcceEEEeCCCCccHHHHHHHHhcCCcEEeeEcCCCCceeEEeEhhhhccccc
Q 018729 203 LTEKTAKDAMTPISKAFSLDLDATLTLDTLNAIMTMGHSRVPVYSGNPTNIIGLILVKNLLSVDY 267 (351)
Q Consensus 203 l~~~~v~~iMtpr~~v~~v~~~~t~~~e~~~~~~~~~~sr~PV~~~~~d~ivGiv~~kdll~~~~ 267 (351)
..+.+++++|.+ ++.++++++++. ++++.|.+++.+++||++++ ++++|+|+.+|++....
T Consensus 72 ~~~~~v~~im~~--~~~~v~~~~~l~-~a~~~m~~~~~~~lpVvd~~-g~~~Givt~~dll~~~~ 132 (184)
T 1pvm_A 72 PDEVPIRLVMRK--PIPKVKSDYDVK-DVAAYLSENGLERCAVVDDP-GRVVGIVTLTDLSRYLS 132 (184)
T ss_dssp GGGSBGGGTSBS--SCCEEETTCBHH-HHHHHHHHHTCSEEEEECTT-CCEEEEEEHHHHTTTSC
T ss_pred cccCCHHHHhCC--CCcEECCCCCHH-HHHHHHHHcCCcEEEEEcCC-CeEEEEEEHHHHHHHHH
Confidence 456789999986 568899999998 99999999999999999875 79999999999987654
No 82
>2rc3_A CBS domain; in SITU proteolysis, BR, structural genomics, PSI-2, protein structure initiative; HET: NAD; 1.60A {Nitrosomonas europaea atcc 19718} SCOP: d.37.1.1
Probab=98.02 E-value=5.1e-06 Score=67.06 Aligned_cols=59 Identities=25% Similarity=0.430 Sum_probs=52.8
Q ss_pred ccccccccccccCcceEEEeCCCCccHHHHHHHHhcCCcEEeeEcCCCCceeEEeEhhhhcccc
Q 018729 203 LTEKTAKDAMTPISKAFSLDLDATLTLDTLNAIMTMGHSRVPVYSGNPTNIIGLILVKNLLSVD 266 (351)
Q Consensus 203 l~~~~v~~iMtpr~~v~~v~~~~t~~~e~~~~~~~~~~sr~PV~~~~~d~ivGiv~~kdll~~~ 266 (351)
..+.+++++|++ ++.++++++++. ++++.+.+++.+++||++ + |+++|+++.+|++...
T Consensus 71 ~~~~~v~~~m~~--~~~~v~~~~~l~-~~~~~m~~~~~~~lpVvd-~-g~~~Giit~~dll~~~ 129 (135)
T 2rc3_A 71 VKDTQVKEIMTR--QVAYVDLNNTNE-DCMALITEMRVRHLPVLD-D-GKVIGLLSIGDLVKDA 129 (135)
T ss_dssp GGGSBGGGTSBC--SCCCBCTTCBHH-HHHHHHHHHTCSEEEEEE-T-TEEEEEEEHHHHHHHH
T ss_pred cccCCHHHhccC--CCeEECCCCcHH-HHHHHHHHhCCCEEEEEe-C-CEEEEEEEHHHHHHHH
Confidence 457899999987 568899999998 999999999999999998 4 8999999999998754
No 83
>4gqw_A CBS domain-containing protein CBSX1, chloroplasti; thioredoxin, plant, protein binding; 2.20A {Arabidopsis thaliana}
Probab=97.97 E-value=4.1e-06 Score=68.67 Aligned_cols=61 Identities=21% Similarity=0.394 Sum_probs=52.7
Q ss_pred ccccccccccccCcceEEEeCCCCccHHHHHHHHhcCCcEEeeEcCCCCceeEEeEhhhhccccc
Q 018729 203 LTEKTAKDAMTPISKAFSLDLDATLTLDTLNAIMTMGHSRVPVYSGNPTNIIGLILVKNLLSVDY 267 (351)
Q Consensus 203 l~~~~v~~iMtpr~~v~~v~~~~t~~~e~~~~~~~~~~sr~PV~~~~~d~ivGiv~~kdll~~~~ 267 (351)
..+.+++++|.| ++.++++++++. ++++.+.+++++++||++++ ++++|+|+.+|++....
T Consensus 82 ~~~~~v~~~m~~--~~~~v~~~~~l~-~a~~~~~~~~~~~l~Vvd~~-g~~~Giit~~dil~~~~ 142 (152)
T 4gqw_A 82 TNGKLVGDLMTP--APLVVEEKTNLE-DAAKILLETKYRRLPVVDSD-GKLVGIITRGNVVRAAL 142 (152)
T ss_dssp --CCBHHHHSEE--SCCCEESSSBHH-HHHHHHHHSSCCEEEEECTT-SBEEEEEEHHHHHHHHH
T ss_pred hccccHHHhcCC--CceEECCCCcHH-HHHHHHHHCCCCEEEEECCC-CcEEEEEEHHHHHHHHH
Confidence 346789999987 557899999998 99999999999999999865 89999999999987643
No 84
>3ghd_A A cystathionine beta-synthase domain protein FUSE ribbon-like domain; PF1953,APC40009,cystathionine beta-synthase domain protein; 1.81A {Pyrococcus furiosus}
Probab=97.95 E-value=6.5e-06 Score=59.52 Aligned_cols=49 Identities=14% Similarity=0.026 Sum_probs=44.1
Q ss_pred CceeCCCCCHHHHHHHHhhCCceEEEEEecCCCcccccchhhhhccccCC
Q 018729 281 IPRVSEDMPLYDILNEFQKGHSHIAVVYKDLNEKKEGELFKDNCKKPRGQ 330 (351)
Q Consensus 281 ~~~V~~~~~l~~lL~~~~~~~~~~aiVvDe~g~~~GiVT~~Dil~~l~~~ 330 (351)
+++|.+++++.++++.|.+++...++|+|+ |+++|++|..|+++.+...
T Consensus 2 ~vtv~p~~tv~ea~~~M~~~~i~~~~V~d~-~~lvGIvT~~Di~~~~~~~ 50 (70)
T 3ghd_A 2 AIVVQPKDTVDRVAKILSRNKAGSAVVMEG-DEILGVVTERDILDKVVAK 50 (70)
T ss_dssp EEEECTTCBHHHHHHHHHHTTCSEEEEEET-TEEEEEEEHHHHHHHTTTT
T ss_pred CEEECCCCcHHHHHHHHHHcCCCEEEEEEC-CEEEEEEEHHHHHHHHHhc
Confidence 568999999999999999999999999985 8999999999999876543
No 85
>1me8_A Inosine-5'-monophosphate dehydrogenase; alpha beta barrel, oxidoreductase; HET: RVP; 1.90A {Tritrichomonas foetus} SCOP: c.1.5.1 PDB: 1ak5_A* 1me7_A* 1me9_A* 1meh_A* 1mei_A* 1mew_A* 1pvn_A* 1lrt_A*
Probab=97.95 E-value=3.4e-06 Score=84.11 Aligned_cols=111 Identities=13% Similarity=0.129 Sum_probs=23.4
Q ss_pred cccccccccccCcceEEEeCCCCccHHHHHHHHhcCCcEEeeEcCCCCceeEEeEhhhhcccccccccccccccc--ccC
Q 018729 204 TEKTAKDAMTPISKAFSLDLDATLTLDTLNAIMTMGHSRVPVYSGNPTNIIGLILVKNLLSVDYRDAVPLRKMII--RRI 281 (351)
Q Consensus 204 ~~~~v~~iMtpr~~v~~v~~~~t~~~e~~~~~~~~~~sr~PV~~~~~d~ivGiv~~kdll~~~~~~~~~l~~i~~--~~~ 281 (351)
.+.+++++|+|+.+++++++++++. ++++.|.+++.+++||++++ ++++|+|+.+|+++...... ...+... ...
T Consensus 159 ~~~~V~diM~~~~~~~tv~~~~sl~-ea~~~m~~~~i~~lpVVDe~-g~lvGiIT~~Dil~~~~~~~-~~~d~~~~l~v~ 235 (503)
T 1me8_A 159 TETKVSDMMTPFSKLVTAHQDTKLS-EANKIIWEKKLNALPIIDDD-QHLRYIVFRKDYDRSQVCHN-ELVDSQKRYLVG 235 (503)
T ss_dssp -----------------------------------------------------------------CC-CCBCTTSCBCCE
T ss_pred ccCcHHHHhCCCCCCEEEcCCCcHH-HHHHHHHHcCCCEEEEEcCC-CeEEEEEEecHHHHhhhccc-chhccccccccc
Confidence 4568999999876689999999998 99999999999999999876 89999999999987654321 1222111 111
Q ss_pred ceeCCCCCHHHHHHHHhhCCceEEEEEec-CCCcccccc
Q 018729 282 PRVSEDMPLYDILNEFQKGHSHIAVVYKD-LNEKKEGEL 319 (351)
Q Consensus 282 ~~V~~~~~l~~lL~~~~~~~~~~aiVvDe-~g~~~GiVT 319 (351)
..++. ....+.++.|.+.+.+.. ++|. +|...|.++
T Consensus 236 a~v~~-~~~~e~~~~l~e~gv~~l-~Vd~~~g~~~~~~~ 272 (503)
T 1me8_A 236 AGINT-RDFRERVPALVEAGADVL-CIDSSDGFSEWQKI 272 (503)
T ss_dssp EEECS-SSHHHHHHHHHHHTCSEE-EECCSCCCSHHHHH
T ss_pred cccCc-hhHHHHHHHHHhhhccce-EEecccCcccchhh
Confidence 23444 566677888888888864 4443 354444333
No 86
>1o50_A CBS domain-containing predicted protein TM0935; CBS-domain PAIR fold, structural genomics, joint center for structural genomics, JCSG; 1.87A {Thermotoga maritima} SCOP: d.37.1.1
Probab=97.95 E-value=5.6e-06 Score=68.85 Aligned_cols=59 Identities=20% Similarity=0.312 Sum_probs=52.6
Q ss_pred ccccccccccccCcceEEEeCCCCccHHHHHHHHhcCCcEEeeEcCCCCceeEEeEhhhhcccc
Q 018729 203 LTEKTAKDAMTPISKAFSLDLDATLTLDTLNAIMTMGHSRVPVYSGNPTNIIGLILVKNLLSVD 266 (351)
Q Consensus 203 l~~~~v~~iMtpr~~v~~v~~~~t~~~e~~~~~~~~~~sr~PV~~~~~d~ivGiv~~kdll~~~ 266 (351)
..+.+++++|+| +.++++++++. ++++.+.+++++++||++++ ++++|+++.+|++...
T Consensus 93 ~~~~~v~~im~~---~~~v~~~~~l~-~a~~~m~~~~~~~lpVvd~~-g~~vGiit~~dll~~l 151 (157)
T 1o50_A 93 LIAKNASEIMLD---PVYVHMDTPLE-EALKLMIDNNIQEMPVVDEK-GEIVGDLNSLEILLAL 151 (157)
T ss_dssp CSSCBHHHHCBC---CCCBCTTSBHH-HHHHHHHHHTCSEEEEECTT-SCEEEEEEHHHHHHHH
T ss_pred HcCCcHHHHcCC---CeEECCCCCHH-HHHHHHHHCCCcEEEEEcCC-CEEEEEEEHHHHHHHH
Confidence 457889999987 57899999998 99999999999999999865 8999999999998754
No 87
>3lhh_A CBS domain protein; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG, cell membrane; HET: MSE AMP; 2.10A {Shewanella oneidensis}
Probab=97.94 E-value=1.6e-05 Score=67.31 Aligned_cols=67 Identities=12% Similarity=0.142 Sum_probs=55.1
Q ss_pred HHHHhhhcccccccccccccCcceEEEeCCCCccHHHHHHHHhcCCcEEeeEcCCCCceeEEeEhhhhcccc
Q 018729 195 TIIAGALELTEKTAKDAMTPISKAFSLDLDATLTLDTLNAIMTMGHSRVPVYSGNPTNIIGLILVKNLLSVD 266 (351)
Q Consensus 195 ~~i~~vl~l~~~~v~~iMtpr~~v~~v~~~~t~~~e~~~~~~~~~~sr~PV~~~~~d~ivGiv~~kdll~~~ 266 (351)
+++....+-.+.+++++| + ++.++++++++. ++++.|.+++..++||++++ ++++|+|+.+|++...
T Consensus 96 dl~~~~~~~~~~~v~~im-~--~~~~v~~~~~l~-~a~~~m~~~~~~~~pVvd~~-g~lvGiit~~Dil~~l 162 (172)
T 3lhh_A 96 QLLSESIAGERLELVDLV-K--NCNFVPNSLSGM-ELLEHFRTTGSQMVFVVDEY-GDLKGLVTLQDMMDAL 162 (172)
T ss_dssp HHHHHHHTTCCCCGGGGC-B--CCEEEETTCCHH-HHHHHHHHHTCSEEEEECTT-SCEEEEEEHHHHHHHH
T ss_pred HHHHHHhhcCcccHHHHh-c--CCeEeCCCCCHH-HHHHHHHHcCCeEEEEEeCC-CCEEEEeeHHHHHHHH
Confidence 344333333467899999 4 568899999998 99999999999999999875 8999999999998764
No 88
>2ef7_A Hypothetical protein ST2348; CBS-domain, structural genomics, NPPSFA, national project on structural and functional analyses; 2.10A {Sulfolobus tokodaii} SCOP: d.37.1.1
Probab=97.94 E-value=5.3e-06 Score=66.71 Aligned_cols=59 Identities=20% Similarity=0.352 Sum_probs=52.4
Q ss_pred ccccccccccCcceEEEeCCCCccHHHHHHHHhcCCcEEeeEcCCCCceeEEeEhhhhccccc
Q 018729 205 EKTAKDAMTPISKAFSLDLDATLTLDTLNAIMTMGHSRVPVYSGNPTNIIGLILVKNLLSVDY 267 (351)
Q Consensus 205 ~~~v~~iMtpr~~v~~v~~~~t~~~e~~~~~~~~~~sr~PV~~~~~d~ivGiv~~kdll~~~~ 267 (351)
+.+++++|.+ ++.++++++++. ++++.+.+++.+++||++++ |+++|+++.+|++....
T Consensus 66 ~~~v~~~~~~--~~~~v~~~~~l~-~~~~~~~~~~~~~l~Vvd~~-g~~~Giit~~dll~~~~ 124 (133)
T 2ef7_A 66 ETKAEEFMTA--SLITIREDSPIT-GALALMRQFNIRHLPVVDDK-GNLKGIISIRDITRAID 124 (133)
T ss_dssp TCBGGGTSEE--CCCCEETTSBHH-HHHHHHHHHTCSEEEEECTT-SCEEEEEEHHHHHHHHH
T ss_pred ccCHHHHcCC--CCEEECCCCCHH-HHHHHHHHcCCCEEEEECCC-CeEEEEEEHHHHHHHHH
Confidence 5789999986 567899999998 99999999999999999865 89999999999987543
No 89
>3jtf_A Magnesium and cobalt efflux protein; CBS domain, CORC, AMP, structural genomics, PSI-2, protein S initiative; HET: MSE AMP; 2.00A {Bordetella parapertussis}
Probab=97.93 E-value=1.2e-05 Score=64.66 Aligned_cols=58 Identities=16% Similarity=0.147 Sum_probs=50.8
Q ss_pred cccccccccccCcceEEEeCCCCccHHHHHHHHhcCCcEEeeEcCCCCceeEEeEhhhhcccc
Q 018729 204 TEKTAKDAMTPISKAFSLDLDATLTLDTLNAIMTMGHSRVPVYSGNPTNIIGLILVKNLLSVD 266 (351)
Q Consensus 204 ~~~~v~~iMtpr~~v~~v~~~~t~~~e~~~~~~~~~~sr~PV~~~~~d~ivGiv~~kdll~~~ 266 (351)
.+.+++++|.| +.++++++++. ++++.|.+++..++||++++ |+++|+++.+|++...
T Consensus 67 ~~~~v~~~m~~---~~~v~~~~~l~-~~~~~m~~~~~~~~pVvd~~-g~~~Giit~~Dil~~l 124 (129)
T 3jtf_A 67 PALDIRSLVRP---AVFIPEVKRLN-VLLREFRASRNHLAIVIDEH-GGISGLVTMEDVLEQI 124 (129)
T ss_dssp TTSCGGGGCBC---CCEEETTCBHH-HHHHHHHTSSCCEEEEECC--CCEEEEEEHHHHHHHH
T ss_pred CCcCHHHHhCC---CeEeCCCCcHH-HHHHHHHhcCCeEEEEEeCC-CCEEEEEEHHHHHHHH
Confidence 46789999965 57899999998 99999999999999999875 8999999999998754
No 90
>3fhm_A Uncharacterized protein ATU1752; CBS domain, prokaryotic, bound nucleotide, AMP, NADH, struct genomics, PSI-2; HET: AMP NAI; 2.70A {Agrobacterium tumefaciens str}
Probab=97.93 E-value=9.2e-06 Score=68.15 Aligned_cols=61 Identities=15% Similarity=0.225 Sum_probs=53.8
Q ss_pred cccccccccccccCcceEEEeCCCCccHHHHHHHHhcCCcEEeeEcCCCCceeEEeEhhhhccccc
Q 018729 202 ELTEKTAKDAMTPISKAFSLDLDATLTLDTLNAIMTMGHSRVPVYSGNPTNIIGLILVKNLLSVDY 267 (351)
Q Consensus 202 ~l~~~~v~~iMtpr~~v~~v~~~~t~~~e~~~~~~~~~~sr~PV~~~~~d~ivGiv~~kdll~~~~ 267 (351)
...+.+++++|++ ++.++++++++. ++++.+.+++++++||+++ |+++|+|+.+|++....
T Consensus 89 ~~~~~~v~~~m~~--~~~~v~~~~~l~-~a~~~m~~~~~~~lpVvd~--g~~~Giit~~dil~~~~ 149 (165)
T 3fhm_A 89 ASLQQSVSVAMTK--NVVRCQHNSTTD-QLMEIMTGGRFRHVPVEEN--GRLAGIISIGDVVKARI 149 (165)
T ss_dssp GGGTSBGGGTSBS--SCCCBCTTCBHH-HHHHHHHHHTCSEEEEEET--TEEEEEEEHHHHHHHTT
T ss_pred ccccCCHHHHhcC--CCeEECCCCcHH-HHHHHHHHcCCCEEEEEEC--CEEEEEEEHHHHHHHHH
Confidence 3457899999985 668899999998 9999999999999999986 89999999999987653
No 91
>2uv4_A 5'-AMP-activated protein kinase subunit gamma-1; transferase, CBS domain, lipid synthesis, fatty acid biosynthesis; HET: AMP; 1.33A {Homo sapiens} PDB: 2uv5_A* 2uv6_A* 2uv7_A*
Probab=97.93 E-value=1.2e-05 Score=66.42 Aligned_cols=60 Identities=17% Similarity=0.255 Sum_probs=52.6
Q ss_pred ccccccccccC----cceEEEeCCCCccHHHHHHHHhcCCcEEeeEcCCCCceeEEeEhhhhcccc
Q 018729 205 EKTAKDAMTPI----SKAFSLDLDATLTLDTLNAIMTMGHSRVPVYSGNPTNIIGLILVKNLLSVD 266 (351)
Q Consensus 205 ~~~v~~iMtpr----~~v~~v~~~~t~~~e~~~~~~~~~~sr~PV~~~~~d~ivGiv~~kdll~~~ 266 (351)
+.+++++|.++ .++.++++++++. ++++.+.+++.+++||++++ ++++|+++.+|++...
T Consensus 86 ~~~v~~~m~~~~~~~~~~~~v~~~~~l~-~a~~~m~~~~~~~lpVvd~~-g~~vGiit~~dil~~l 149 (152)
T 2uv4_A 86 DVSVTKALQHRSHYFEGVLKCYLHETLE-TIINRLVEAEVHRLVVVDEN-DVVKGIVSLSDILQAL 149 (152)
T ss_dssp TSBGGGGGGTCCHHHHTCSEECTTSBHH-HHHHHHHHHTCSEEEEECTT-SBEEEEEEHHHHHHHH
T ss_pred cchHHHHHhhhhcccCCCeEECCCCcHH-HHHHHHHHcCCeEEEEECCC-CeEEEEEEHHHHHHHH
Confidence 56799999754 4678999999998 99999999999999999875 8999999999998653
No 92
>2yzi_A Hypothetical protein PH0107; sheet/helix/sheet/sheet/helix, structural genomics, unknown function, NPPSFA; 2.25A {Pyrococcus horikoshii} SCOP: d.37.1.1
Probab=97.92 E-value=1.3e-05 Score=64.87 Aligned_cols=56 Identities=11% Similarity=0.048 Sum_probs=51.2
Q ss_pred ccccccccccCceeCCCCCHHHHHHHHhhCCceEEEEEecCCCcccccchhhhhcc
Q 018729 271 VPLRKMIIRRIPRVSEDMPLYDILNEFQKGHSHIAVVYKDLNEKKEGELFKDNCKK 326 (351)
Q Consensus 271 ~~l~~i~~~~~~~V~~~~~l~~lL~~~~~~~~~~aiVvDe~g~~~GiVT~~Dil~~ 326 (351)
.+++++|.++++++++++++.++++.|.+++.+.++|+|++|+++|+||..|+++.
T Consensus 7 ~~v~~im~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~~~~~Givt~~dl~~~ 62 (138)
T 2yzi_A 7 APIKVYMTKKLLGVKPSTSVQEASRLMMEFDVGSLVVINDDGNVVGFFTKSDIIRR 62 (138)
T ss_dssp SBGGGTCBCCCCEECTTSBHHHHHHHHHHHTCSEEEEECTTSCEEEEEEHHHHHHH
T ss_pred hhHHHHhcCCCeEECCCCcHHHHHHHHHHcCCCEEEEEcCCCcEEEEEeHHHHHHH
Confidence 46788877888999999999999999999999999999989999999999999853
No 93
>3k2v_A Putative D-arabinose 5-phosphate isomerase; KPSF-like protein, CBS domain, structural genomics, PSI-2, P structure initiative; HET: MSE CMK; 1.95A {Klebsiella pneumoniae subsp} PDB: 3fna_A*
Probab=97.92 E-value=1e-05 Score=66.64 Aligned_cols=59 Identities=15% Similarity=0.068 Sum_probs=53.7
Q ss_pred ccccccccc--cCceeCCCCCHHHHHHHHhhCCceEEEEEecCCCcccccchhhhhccccC
Q 018729 271 VPLRKMIIR--RIPRVSEDMPLYDILNEFQKGHSHIAVVYKDLNEKKEGELFKDNCKKPRG 329 (351)
Q Consensus 271 ~~l~~i~~~--~~~~V~~~~~l~~lL~~~~~~~~~~aiVvDe~g~~~GiVT~~Dil~~l~~ 329 (351)
.+++++|.+ +++++++++++.++++.|.+++.+.++|+|++|+++|+||..|+++.+..
T Consensus 28 ~~v~dim~~~~~~~~v~~~~~~~~a~~~m~~~~~~~~~Vvd~~~~~~Givt~~dl~~~~~~ 88 (149)
T 3k2v_A 28 LRVNDIMHTGDEIPHVGLQATLRDALLEITRKNLGMTAICDDDMNIIGIFTDGDLRRVFDT 88 (149)
T ss_dssp SBGGGTSBCGGGSCEECTTCBHHHHHHHHHHHTSSEEEEECTTCBEEEEEEHHHHHHHHCS
T ss_pred cCHHHHhcCCCCCeEECCCCcHHHHHHHHHhCCCcEEEEECCCCcEEEEecHHHHHHHHhc
Confidence 368888766 78999999999999999999999999999999999999999999987754
No 94
>2rih_A Conserved protein with 2 CBS domains; bateman domain, AMP binding protein, ligand-BIND protein; 2.10A {Pyrobaculum aerophilum} SCOP: d.37.1.1 PDB: 2rif_A
Probab=97.92 E-value=1.9e-05 Score=64.15 Aligned_cols=57 Identities=16% Similarity=0.196 Sum_probs=51.3
Q ss_pred ccccccccccCcceEEEeCCCCccHHHHHHHHhcCCcEEeeEcCCCCceeEEeEhhhhcccc
Q 018729 205 EKTAKDAMTPISKAFSLDLDATLTLDTLNAIMTMGHSRVPVYSGNPTNIIGLILVKNLLSVD 266 (351)
Q Consensus 205 ~~~v~~iMtpr~~v~~v~~~~t~~~e~~~~~~~~~~sr~PV~~~~~d~ivGiv~~kdll~~~ 266 (351)
+.+++++|++ ++.+++++ ++. ++++.+.+++.+++||++++ ++++|+++.+|+++..
T Consensus 70 ~~~v~~~m~~--~~~~v~~~-~l~-~a~~~m~~~~~~~l~Vvd~~-g~~~Giit~~dll~~~ 126 (141)
T 2rih_A 70 DGPAMPIANS--PITVLDTD-PVH-VAAEKMRRHNIRHVVVVNKN-GELVGVLSIRDLCFER 126 (141)
T ss_dssp TSBSGGGCBC--CCEEETTS-BHH-HHHHHHHHHTCSEEEEECTT-SCEEEEEEHHHHHSCH
T ss_pred CCCHHHHcCC--CCeEEcCC-CHH-HHHHHHHHcCCeEEEEEcCC-CcEEEEEEHHHHHHHH
Confidence 5789999976 66889999 998 99999999999999999865 8999999999998754
No 95
>3lv9_A Putative transporter; CBS domain, PSI, MCSG, structural genomics, protein structur initiative, midwest center for structural genomics; 2.40A {Clostridium difficile 630}
Probab=97.92 E-value=1.6e-05 Score=65.25 Aligned_cols=57 Identities=11% Similarity=0.132 Sum_probs=51.0
Q ss_pred ccccccccccCcceEEEeCCCCccHHHHHHHHhcCCcEEeeEcCCCCceeEEeEhhhhcccc
Q 018729 205 EKTAKDAMTPISKAFSLDLDATLTLDTLNAIMTMGHSRVPVYSGNPTNIIGLILVKNLLSVD 266 (351)
Q Consensus 205 ~~~v~~iMtpr~~v~~v~~~~t~~~e~~~~~~~~~~sr~PV~~~~~d~ivGiv~~kdll~~~ 266 (351)
+.+++++| + ++.++++++++. ++++.+.+++..++||++++ |+++|+++.+|++...
T Consensus 87 ~~~v~~~m-~--~~~~v~~~~~l~-~~~~~m~~~~~~~l~Vvd~~-g~~~Giit~~dil~~l 143 (148)
T 3lv9_A 87 KIELEEIL-R--DIIYISENLTID-KALERIRKEKLQLAIVVDEY-GGTSGVVTIEDILEEI 143 (148)
T ss_dssp CCCGGGTC-B--CCEEEETTSBHH-HHHHHHHHHTCSEEEEECTT-SSEEEEEEHHHHHHHH
T ss_pred CccHHHhc-C--CCeEECCCCCHH-HHHHHHHhcCCeEEEEEeCC-CCEEEEEEHHHHHHHH
Confidence 78899999 3 457899999998 99999999999999999875 8999999999998754
No 96
>3i8n_A Uncharacterized protein VP2912; APC64273.1, vibrio parahaemolyticus RIMD 2210633, structural genomics, PSI-2; 2.15A {Vibrio parahaemolyticus}
Probab=97.90 E-value=1.3e-05 Score=64.46 Aligned_cols=58 Identities=16% Similarity=0.225 Sum_probs=50.9
Q ss_pred cccccccccccCcceEEEeCCCCccHHHHHHHHhcCCcEEeeEcCCCCceeEEeEhhhhcccc
Q 018729 204 TEKTAKDAMTPISKAFSLDLDATLTLDTLNAIMTMGHSRVPVYSGNPTNIIGLILVKNLLSVD 266 (351)
Q Consensus 204 ~~~~v~~iMtpr~~v~~v~~~~t~~~e~~~~~~~~~~sr~PV~~~~~d~ivGiv~~kdll~~~ 266 (351)
.+.+++++|.| +.++++++++. ++++.+.+++..++||++++ |+++|+++.+|++...
T Consensus 70 ~~~~v~~~m~~---~~~v~~~~~l~-~~~~~m~~~~~~~~~Vvd~~-g~~vGivt~~dil~~l 127 (130)
T 3i8n_A 70 GQKQLGAVMRP---IQVVLNNTALP-KVFDQMMTHRLQLALVVDEY-GTVLGLVTLEDIFEHL 127 (130)
T ss_dssp TTSBHHHHSEE---CCEEETTSCHH-HHHHHHHHHTCCEEEEECTT-SCEEEEEEHHHHHHHH
T ss_pred CcCCHHHHhcC---CcCcCCCCcHH-HHHHHHHHcCCeEEEEEcCC-CCEEEEEEHHHHHHHH
Confidence 36789999954 57899999998 99999999999999999875 8999999999998653
No 97
>2nyc_A Nuclear protein SNF4; bateman2 domain, AMP kinase, protein binding; 1.90A {Saccharomyces cerevisiae} SCOP: d.37.1.1 PDB: 2nye_A
Probab=97.90 E-value=7.5e-06 Score=66.47 Aligned_cols=62 Identities=13% Similarity=0.187 Sum_probs=52.4
Q ss_pred ccccccccccccCc----ceEEEeCCCCccHHHHHHHHhcCCcEEeeEcCCCCceeEEeEhhhhcccc
Q 018729 203 LTEKTAKDAMTPIS----KAFSLDLDATLTLDTLNAIMTMGHSRVPVYSGNPTNIIGLILVKNLLSVD 266 (351)
Q Consensus 203 l~~~~v~~iMtpr~----~v~~v~~~~t~~~e~~~~~~~~~~sr~PV~~~~~d~ivGiv~~kdll~~~ 266 (351)
..+.+++++|+++. ++.+++.++++. ++++.+.+++.+++||++++ ++++|+++.+|++...
T Consensus 74 ~~~~~v~~~m~~~~~~~~~~~~v~~~~~l~-~~~~~m~~~~~~~l~Vvd~~-g~~~Giit~~dil~~l 139 (144)
T 2nyc_A 74 DLSLSVGEALMRRSDDFEGVYTCTKNDKLS-TIMDNIRKARVHRFFVVDDV-GRLVGVLTLSDILKYI 139 (144)
T ss_dssp -CCSBHHHHHHHCC------CEECTTSBHH-HHHHHHHHHTCSEEEEECTT-SBEEEEEEHHHHHHHH
T ss_pred cCCccHHHHHhcCccccCCCeEECCCCcHH-HHHHHHHHCCCCEEEEECCC-CCEEEEEEHHHHHHHH
Confidence 34678999998753 578999999998 99999999999999999865 8999999999998754
No 98
>3sl7_A CBS domain-containing protein CBSX2; CBS-PAIR protein, redox regulator, plant CBS domain, thiored chloroplast, membrane protein; 1.91A {Arabidopsis thaliana}
Probab=97.90 E-value=8.5e-06 Score=68.88 Aligned_cols=61 Identities=21% Similarity=0.380 Sum_probs=53.6
Q ss_pred cccccccccccccCcceEEEeCCCCccHHHHHHHHhcCCcEEeeEcCCCCceeEEeEhhhhcccc
Q 018729 202 ELTEKTAKDAMTPISKAFSLDLDATLTLDTLNAIMTMGHSRVPVYSGNPTNIIGLILVKNLLSVD 266 (351)
Q Consensus 202 ~l~~~~v~~iMtpr~~v~~v~~~~t~~~e~~~~~~~~~~sr~PV~~~~~d~ivGiv~~kdll~~~ 266 (351)
...+.+++++|++ ++.++++++++. ++++.|.+++++++||++++ ++++|+|+.+|++...
T Consensus 94 ~~~~~~v~~~m~~--~~~~v~~~~~l~-~a~~~m~~~~~~~lpVvd~~-g~~vGiit~~dil~~~ 154 (180)
T 3sl7_A 94 KTYGKVVGDLMTP--SPLVVRDSTNLE-DAARLLLETKFRRLPVVDAD-GKLIGILTRGNVVRAA 154 (180)
T ss_dssp TTTTCBHHHHSEE--SCCCEETTSBHH-HHHHHHTTSTTCEEEEECTT-CBEEEEEEHHHHHHHH
T ss_pred ccccccHHHHhCC--CceEeCCCCcHH-HHHHHHHHcCCCEEEEECCC-CeEEEEEEHHHHHHHH
Confidence 3457789999987 457899999998 99999999999999999865 8999999999998764
No 99
>3oco_A Hemolysin-like protein containing CBS domains; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; 2.20A {Oenococcus oeni}
Probab=97.89 E-value=1.6e-05 Score=65.80 Aligned_cols=59 Identities=12% Similarity=0.128 Sum_probs=52.2
Q ss_pred cccccccccccCcceEEEeCCCCccHHHHHHHHhcCCcEEeeEcCCCCceeEEeEhhhhccccc
Q 018729 204 TEKTAKDAMTPISKAFSLDLDATLTLDTLNAIMTMGHSRVPVYSGNPTNIIGLILVKNLLSVDY 267 (351)
Q Consensus 204 ~~~~v~~iMtpr~~v~~v~~~~t~~~e~~~~~~~~~~sr~PV~~~~~d~ivGiv~~kdll~~~~ 267 (351)
.+.+++++| + ++.++++++++. ++++.|.+++..++||++++ |+++|+|+.+|++....
T Consensus 84 ~~~~v~~~m-~--~~~~v~~~~~l~-~~~~~m~~~~~~~lpVvd~~-g~~vGivt~~dil~~l~ 142 (153)
T 3oco_A 84 DKAKISTIM-R--DIVSVPENMKVP-DVMEEMSAHRVPMAIVIDEY-GGTSGIITDKDVYEELF 142 (153)
T ss_dssp TTSBGGGTC-B--CCEEEETTSBHH-HHHHHHHHTTCSCEEEECTT-SCEEEEECHHHHHHHHH
T ss_pred CCCcHHHHh-C--CCeEECCCCCHH-HHHHHHHHcCCcEEEEEeCC-CCEEEEeeHHHHHHHHh
Confidence 377899999 4 568899999998 99999999999999999875 89999999999987643
No 100
>1y5h_A Hypothetical protein RV2626C; CBS domain, unknown function; 1.50A {Mycobacterium tuberculosis} SCOP: d.37.1.1 PDB: 1xkf_A
Probab=97.89 E-value=7e-06 Score=65.94 Aligned_cols=58 Identities=21% Similarity=0.338 Sum_probs=52.0
Q ss_pred cccccccccccCcceEEEeCCCCccHHHHHHHHhcCCcEEeeEcCCCCceeEEeEhhhhcccc
Q 018729 204 TEKTAKDAMTPISKAFSLDLDATLTLDTLNAIMTMGHSRVPVYSGNPTNIIGLILVKNLLSVD 266 (351)
Q Consensus 204 ~~~~v~~iMtpr~~v~~v~~~~t~~~e~~~~~~~~~~sr~PV~~~~~d~ivGiv~~kdll~~~ 266 (351)
.+.+++++|++ ++.++++++++. ++++.+.+++.+++||+++ |+++|+++.+|++...
T Consensus 72 ~~~~v~~~m~~--~~~~v~~~~~l~-~~~~~m~~~~~~~l~Vvd~--g~~~Giit~~dil~~l 129 (133)
T 1y5h_A 72 NTATAGELARD--SIYYVDANASIQ-EMLNVMEEHQVRRVPVISE--HRLVGIVTEADIARHL 129 (133)
T ss_dssp TTSBHHHHHTT--CCCCEETTCCHH-HHHHHHHHHTCSEEEEEET--TEEEEEEEHHHHHHTC
T ss_pred cccCHHHHhcC--CCEEECCCCCHH-HHHHHHHHcCCCEEEEEEC--CEEEEEEEHHHHHHHH
Confidence 46789999987 668899999998 9999999999999999986 7999999999998754
No 101
>3nqr_A Magnesium and cobalt efflux protein CORC; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics; HET: AMP; 2.00A {Salmonella typhimurium}
Probab=97.87 E-value=1.1e-05 Score=64.44 Aligned_cols=59 Identities=14% Similarity=0.089 Sum_probs=51.5
Q ss_pred ccccccccc--cCceeCCCCCHHHHHHHHhhCCceEEEEEecC-CCcccccchhhhhccccC
Q 018729 271 VPLRKMIIR--RIPRVSEDMPLYDILNEFQKGHSHIAVVYKDL-NEKKEGELFKDNCKKPRG 329 (351)
Q Consensus 271 ~~l~~i~~~--~~~~V~~~~~l~~lL~~~~~~~~~~aiVvDe~-g~~~GiVT~~Dil~~l~~ 329 (351)
.+++++|.. ++.++++++++.++++.|.+++.+..+|+|++ |+++|+||..|+++.+..
T Consensus 3 ~~v~diM~~~~~~~~v~~~~~~~~a~~~m~~~~~~~~pVvd~~~~~~vGivt~~dl~~~~~~ 64 (127)
T 3nqr_A 3 QRVRDIMIPRSQMITLKRNQTLDECLDVIIESAHSRFPVISEDKDHIEGILMAKDLLPFMRS 64 (127)
T ss_dssp CBHHHHSEEGGGCCCEETTCCHHHHHHHHHHHCCSEEEEESSSTTCEEEEEEGGGGGGGGST
T ss_pred cCHHHhcccHHHeEEEcCCCCHHHHHHHHHhCCCCEEEEEcCCCCcEEEEEEHHHHHHHHhc
Confidence 356777653 38899999999999999999999999999988 899999999999987753
No 102
>2p9m_A Hypothetical protein MJ0922; structural genomics, collaboratory for structural genomics, secsg; 2.59A {Methanocaldococcus jannaschii dsm 2661ORGANISM_TAXID}
Probab=97.86 E-value=1.3e-05 Score=64.63 Aligned_cols=58 Identities=10% Similarity=0.056 Sum_probs=52.2
Q ss_pred ccccccccccCceeCCCCCHHHHHHHHhhCCceEEEEEecCCCcccccchhhh-hcccc
Q 018729 271 VPLRKMIIRRIPRVSEDMPLYDILNEFQKGHSHIAVVYKDLNEKKEGELFKDN-CKKPR 328 (351)
Q Consensus 271 ~~l~~i~~~~~~~V~~~~~l~~lL~~~~~~~~~~aiVvDe~g~~~GiVT~~Di-l~~l~ 328 (351)
.+++++|.+++.++++++++.++++.|++++.+.++|+|++|+++|++|..|+ .+.+.
T Consensus 8 ~~v~~im~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~~~~~Givt~~dl~~~~~~ 66 (138)
T 2p9m_A 8 IKVKDVMTKNVITAKRHEGVVEAFEKMLKYKISSLPVIDDENKVIGIVTTTDIGYNLIR 66 (138)
T ss_dssp CBGGGTSBCSCCCEETTSBHHHHHHHHHHHTCCEEEEECTTCBEEEEEEHHHHHHHHTT
T ss_pred CCHHHhhcCCceEECCCCcHHHHHHHHHHCCCcEEEEECCCCeEEEEEEHHHHHHHHHh
Confidence 46788877788999999999999999999999999999999999999999999 77554
No 103
>3oi8_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: ADN; 1.99A {Neisseria meningitidis serogroup B}
Probab=97.83 E-value=1.5e-05 Score=66.35 Aligned_cols=56 Identities=16% Similarity=0.195 Sum_probs=49.9
Q ss_pred cccccccccccCcceEEEeCCCCccHHHHHHHHhcCCcEEeeEcCCCCceeEEeEhhhhcc
Q 018729 204 TEKTAKDAMTPISKAFSLDLDATLTLDTLNAIMTMGHSRVPVYSGNPTNIIGLILVKNLLS 264 (351)
Q Consensus 204 ~~~~v~~iMtpr~~v~~v~~~~t~~~e~~~~~~~~~~sr~PV~~~~~d~ivGiv~~kdll~ 264 (351)
.+.+++++|+| +.++++++++. ++++.|.+++..++||++++ |+++|+++.+|++.
T Consensus 101 ~~~~v~~im~~---~~~v~~~~~l~-~a~~~m~~~~~~~~~Vvd~~-g~~~Givt~~Dile 156 (156)
T 3oi8_A 101 EQFHLKSILRP---AVFVPEGKSLT-ALLKEFREQRNHMAIVIDEY-GGTSGLVTFEDIIE 156 (156)
T ss_dssp GGCCHHHHCBC---CCEEETTSBHH-HHHHHHHHTTCCEEEEECTT-SSEEEEEEHHHHCC
T ss_pred CcccHHHHcCC---CEEECCCCCHH-HHHHHHHhcCCeEEEEECCC-CCEEEEEEHHHhcC
Confidence 46789999975 57899999998 99999999999999999875 89999999999863
No 104
>3ctu_A CBS domain protein; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; 2.81A {Streptococcus pneumoniae TIGR4} PDB: 3k6e_A
Probab=97.82 E-value=8.9e-06 Score=67.37 Aligned_cols=58 Identities=5% Similarity=-0.119 Sum_probs=51.2
Q ss_pred cccccccc--ccCceeCCCCCHHHHHHHHhhCCceEEEEEecCCCcccccchhhhhcccc
Q 018729 271 VPLRKMII--RRIPRVSEDMPLYDILNEFQKGHSHIAVVYKDLNEKKEGELFKDNCKKPR 328 (351)
Q Consensus 271 ~~l~~i~~--~~~~~V~~~~~l~~lL~~~~~~~~~~aiVvDe~g~~~GiVT~~Dil~~l~ 328 (351)
.+++++|. +++.++++++++.++++.|.+++.+.++|+|++|+++|+||..|+++.+.
T Consensus 15 ~~v~dim~p~~~~~~v~~~~~l~~a~~~m~~~~~~~~~Vvd~~~~~~Giit~~dl~~~~~ 74 (156)
T 3ctu_A 15 GQEETFLTPAKNLAVLIDTHNADHATLLLSQMTYTRVPVVTDEKQFVGTIGLRDIMAYQM 74 (156)
T ss_dssp TTGGGGEEEGGGCCCEETTSBHHHHHHHHTTCSSSEEEEECC-CBEEEEEEHHHHHHHHH
T ss_pred HHHHHHcCcccCceEECCCCCHHHHHHHHHHCCCceEeEECCCCEEEEEEcHHHHHHHHH
Confidence 45778866 67899999999999999999999999999999999999999999997653
No 105
>2o16_A Acetoin utilization protein ACUB, putative; structural genomics, unknown function, PSI-2, protein struct initiative; 1.90A {Vibrio cholerae} SCOP: d.37.1.1
Probab=97.82 E-value=9.4e-06 Score=67.79 Aligned_cols=58 Identities=9% Similarity=-0.022 Sum_probs=52.5
Q ss_pred ccccccccccCceeCCCCCHHHHHHHHhhCCceEEEEEecCCCcccccchhhhhcccc
Q 018729 271 VPLRKMIIRRIPRVSEDMPLYDILNEFQKGHSHIAVVYKDLNEKKEGELFKDNCKKPR 328 (351)
Q Consensus 271 ~~l~~i~~~~~~~V~~~~~l~~lL~~~~~~~~~~aiVvDe~g~~~GiVT~~Dil~~l~ 328 (351)
.+++++|.+++++++++.++.++++.|++++.+.++|+|++|+++|+||..|+++.+.
T Consensus 5 ~~v~dim~~~~~~v~~~~tl~~a~~~m~~~~~~~~pVvd~~~~lvGivt~~dl~~~~~ 62 (160)
T 2o16_A 5 IKVEDMMTRHPHTLLRTHTLNDAKHLMEALDIRHVPIVDANKKLLGIVSQRDLLAAQE 62 (160)
T ss_dssp CBGGGTSEESCCCBCTTSBHHHHHHHHHHHTCSEEEEECTTCBEEEEEEHHHHHHHHH
T ss_pred CcHHHHhcCCCeEECCCCcHHHHHHHHHHcCCCEEEEEcCCCcEEEEEeHHHHHHHHH
Confidence 4677887778899999999999999999999999999999999999999999987653
No 106
>3lqn_A CBS domain protein; csgid, structural genomics, unknown function, center for structural genomics of infectious diseases; 1.80A {Bacillus anthracis} SCOP: d.37.1.0
Probab=97.81 E-value=2.7e-05 Score=63.91 Aligned_cols=59 Identities=14% Similarity=0.219 Sum_probs=51.1
Q ss_pred ccccccccccccCcceEEEeCCCCccHHHHHHHHhcCCcEEeeEcCCCCceeEEeEhhhhccccc
Q 018729 203 LTEKTAKDAMTPISKAFSLDLDATLTLDTLNAIMTMGHSRVPVYSGNPTNIIGLILVKNLLSVDY 267 (351)
Q Consensus 203 l~~~~v~~iMtpr~~v~~v~~~~t~~~e~~~~~~~~~~sr~PV~~~~~d~ivGiv~~kdll~~~~ 267 (351)
..+.+++++|++ ++.++++++++. ++++.+.++++ +||++++ |+++|+|+.+|++....
T Consensus 84 ~~~~~v~~~m~~--~~~~v~~~~~l~-~a~~~~~~~~~--l~Vvd~~-g~~~Giit~~dil~~l~ 142 (150)
T 3lqn_A 84 LEEMKVEQVMKQ--DIPVLKLEDSFA-KALEMTIDHPF--ICAVNED-GYFEGILTRRAILKLLN 142 (150)
T ss_dssp GGGCBGGGTCBS--SCCEEETTCBHH-HHHHHHHHCSE--EEEECTT-CBEEEEEEHHHHHHHHH
T ss_pred HhcCCHHHHhcC--CCceeCCCCCHH-HHHHHHHhCCE--EEEECCC-CcEEEEEEHHHHHHHHH
Confidence 356789999985 568899999998 99999999887 9999865 89999999999987643
No 107
>3hf7_A Uncharacterized CBS-domain protein; CSB-domain PAIR, AMP, PSI, MCSG, STR genomics, midwest center for structural genomics; HET: AMP; 2.75A {Klebsiella pneumoniae subsp}
Probab=97.81 E-value=1.7e-05 Score=63.88 Aligned_cols=58 Identities=17% Similarity=0.149 Sum_probs=50.2
Q ss_pred cccccccccccCcceEEEeCCCCccHHHHHHHHhcCCcEEeeEcCCCCceeEEeEhhhhcccc
Q 018729 204 TEKTAKDAMTPISKAFSLDLDATLTLDTLNAIMTMGHSRVPVYSGNPTNIIGLILVKNLLSVD 266 (351)
Q Consensus 204 ~~~~v~~iMtpr~~v~~v~~~~t~~~e~~~~~~~~~~sr~PV~~~~~d~ivGiv~~kdll~~~ 266 (351)
...+++++|. ++.++++++++. ++++.|.+++..++||++++ |+++|+++.+|++...
T Consensus 68 ~~~~v~~~m~---~~~~v~~~~~l~-~~~~~m~~~~~~~~~Vvd~~-g~lvGiit~~Dil~~l 125 (130)
T 3hf7_A 68 TKEIMLRAAD---EIYFVPEGTPLS-TQLVKFQRNKKKVGLVVDEY-GDIQGLVTVEDILEEI 125 (130)
T ss_dssp CHHHHHHHSB---CCCEEETTCBHH-HHHHHHHHHCCCEEEEECTT-SCEEEEEEHHHHHHHH
T ss_pred chhhHHHhcc---CCeEeCCCCcHH-HHHHHHHhcCCeEEEEEcCC-CCEEEEeeHHHHHHHH
Confidence 3467899994 357899999998 99999999999999999875 8999999999998754
No 108
>3usb_A Inosine-5'-monophosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, CBS-domain; HET: MSE IMP; 2.38A {Bacillus anthracis} PDB: 3tsd_A* 3tsb_A*
Probab=97.81 E-value=3.8e-05 Score=76.63 Aligned_cols=110 Identities=15% Similarity=0.138 Sum_probs=80.1
Q ss_pred cccccccccccCcceEEEeCCCCccHHHHHHHHhcCCcEEeeEcCCCCceeEEeEhhhhccccccccccccccccccCc-
Q 018729 204 TEKTAKDAMTPISKAFSLDLDATLTLDTLNAIMTMGHSRVPVYSGNPTNIIGLILVKNLLSVDYRDAVPLRKMIIRRIP- 282 (351)
Q Consensus 204 ~~~~v~~iMtpr~~v~~v~~~~t~~~e~~~~~~~~~~sr~PV~~~~~d~ivGiv~~kdll~~~~~~~~~l~~i~~~~~~- 282 (351)
.+.+++++|+| .++++++.+.++. ++++.+.+++..++||+|++ ++++|+++.+|+++..... ....+...+..+
T Consensus 173 ~~~~V~~vM~~-~~~vtv~~~~~l~-eal~~m~~~~i~~lpVVDe~-g~l~GiIT~~Dil~~~~~p-~a~~D~~~rl~V~ 248 (511)
T 3usb_A 173 YSIKISDVMTK-EQLITAPVGTTLS-EAEKILQKYKIEKLPLVDNN-GVLQGLITIKDIEKVIEFP-NSAKDKQGRLLVG 248 (511)
T ss_dssp SSSBHHHHCCC-CCCCCEETTCCHH-HHHHHHHHHTCSEEEEECTT-SBEEEEEEHHHHHHHHHCT-TCCBCTTSCBCCE
T ss_pred CCCcHHHhccc-CCCEEECCCCCHH-HHHHHHHHcCCCEEEEEeCC-CCEeeeccHHHHHHhhhcc-cchhhhccceeee
Confidence 46789999987 5678899999998 99999999999999999876 8999999999998765332 122332222222
Q ss_pred -eeCCCCCHHHHHHHHhhCCceEEEEEecCCCcccc
Q 018729 283 -RVSEDMPLYDILNEFQKGHSHIAVVYKDLNEKKEG 317 (351)
Q Consensus 283 -~V~~~~~l~~lL~~~~~~~~~~aiVvDe~g~~~Gi 317 (351)
.+..+....+.++.+.+.+.+...|-..+|...|+
T Consensus 249 aavg~~~d~~era~aLveaGvd~I~Id~a~g~~~~v 284 (511)
T 3usb_A 249 AAVGVTADAMTRIDALVKASVDAIVLDTAHGHSQGV 284 (511)
T ss_dssp EEECSSTTHHHHHHHHHHTTCSEEEEECSCTTSHHH
T ss_pred eeeeeccchHHHHHHHHhhccceEEecccccchhhh
Confidence 24434455677778888888877665555544443
No 109
>2emq_A Hypothetical conserved protein; CBS domains, NPPSFA, national project on protein structural functional analyses; 2.50A {Geobacillus kaustophilus}
Probab=97.77 E-value=1.8e-05 Score=65.49 Aligned_cols=59 Identities=12% Similarity=0.016 Sum_probs=52.8
Q ss_pred ccccccccc--cCceeCCCCCHHHHHHHHhhCCceEEEEEecCCCcccccchhhhhccccC
Q 018729 271 VPLRKMIIR--RIPRVSEDMPLYDILNEFQKGHSHIAVVYKDLNEKKEGELFKDNCKKPRG 329 (351)
Q Consensus 271 ~~l~~i~~~--~~~~V~~~~~l~~lL~~~~~~~~~~aiVvDe~g~~~GiVT~~Dil~~l~~ 329 (351)
.++.++|.+ ++++++++.++.++++.|.+++.+.++|+|++|+++|+||..|+++.+..
T Consensus 11 ~~v~~im~~~~~~~~v~~~~~~~~a~~~m~~~~~~~~pVvd~~~~~~Givt~~dl~~~~~~ 71 (157)
T 2emq_A 11 MTVKPFLIPADKVAHVQPGNYLDHALLVLTKTGYSAIPVLDTSYKLHGLISMTMMMDAILG 71 (157)
T ss_dssp CBSTTTCEEGGGSCCBCTTSBHHHHHHHHHHSSSSEEEEECTTCCEEEEEEHHHHHHHSBC
T ss_pred CcHHhhccCCccceEECCCCcHHHHHHHHHHCCceEEEEEcCCCCEEEEeeHHHHHHHHhc
Confidence 567788654 78899999999999999999999999999999999999999999987653
No 110
>3kxr_A Magnesium transporter, putative; cystathionine beta-synthase, Mg2+ transporter, structural GE PSI-2, protein structure initiative; 2.41A {Shewanella oneidensis mr-1}
Probab=97.75 E-value=2.5e-05 Score=68.48 Aligned_cols=60 Identities=17% Similarity=0.239 Sum_probs=53.2
Q ss_pred cccccccccccCcceEEEeCCCCccHHHHHHHHhcCCcEEeeEcCCCCceeEEeEhhhhccccc
Q 018729 204 TEKTAKDAMTPISKAFSLDLDATLTLDTLNAIMTMGHSRVPVYSGNPTNIIGLILVKNLLSVDY 267 (351)
Q Consensus 204 ~~~~v~~iMtpr~~v~~v~~~~t~~~e~~~~~~~~~~sr~PV~~~~~d~ivGiv~~kdll~~~~ 267 (351)
.+.+++++|++ ++.++++++++. ++++.+.+++...+||++++ |+++|+|+..|++....
T Consensus 114 ~~~~v~~im~~--~~~~v~~~~~l~-~a~~~m~~~~~~~lpVVD~~-g~lvGiIT~~Dil~~i~ 173 (205)
T 3kxr_A 114 PHEPLISLLSE--DSRALTANTTLL-DAAEAIEHSREIELPVIDDA-GELIGRVTLRAATALVR 173 (205)
T ss_dssp TTSBGGGGCCS--SCCCEETTSCHH-HHHHHHHTSSCSEEEEECTT-SBEEEEEEHHHHHHHHH
T ss_pred CcchHHHHhcC--CCeEECCCCCHH-HHHHHHHhcCCCEEEEEcCC-CeEEEEEEHHHHHHHHH
Confidence 46789999976 568899999998 99999999999999999875 89999999999987653
No 111
>3k6e_A CBS domain protein; streptococcus pneumoniae TIGR4, structural genomics, PSI-2, protein structure initiative; 2.81A {Streptococcus pneumoniae}
Probab=97.71 E-value=1.4e-05 Score=66.86 Aligned_cols=58 Identities=17% Similarity=0.276 Sum_probs=49.8
Q ss_pred ccccccccccccCcceEEEeCCCCccHHHHHHHHhcCCcEEeeEcCCCCceeEEeEhhhhcccc
Q 018729 203 LTEKTAKDAMTPISKAFSLDLDATLTLDTLNAIMTMGHSRVPVYSGNPTNIIGLILVKNLLSVD 266 (351)
Q Consensus 203 l~~~~v~~iMtpr~~v~~v~~~~t~~~e~~~~~~~~~~sr~PV~~~~~d~ivGiv~~kdll~~~ 266 (351)
+.+.+++++|++ ++.++++++++. ++++.+.++++ +||++++ |+++|+|+.+|++++.
T Consensus 83 ~~~~~v~~im~~--~~~~v~~~~~l~-~~~~~m~~~~~--lpVVd~~-g~l~GiiT~~Dil~~~ 140 (156)
T 3k6e_A 83 MADTDIVHMTKT--DVAVVSPDFTIT-EVLHKLVDESF--LPVVDAE-GIFQGIITRKSILKAV 140 (156)
T ss_dssp HTTSBGGGTCBC--SCCCBCTTCCHH-HHHHHTTTSSE--EEEECTT-SBEEEEEEHHHHHHHH
T ss_pred ccccCHHHhhcC--CceecccccHHH-HHHHHHHHcCC--eEEEecC-CEEEEEEEHHHHHHHH
Confidence 356789999976 668899999998 99999987764 9999876 8999999999998764
No 112
>2pfi_A Chloride channel protein CLC-Ka; cystathionine beta synthetase (CBS) domains containing protein, transport protein; 1.60A {Homo sapiens}
Probab=97.70 E-value=2.4e-05 Score=65.02 Aligned_cols=59 Identities=8% Similarity=0.033 Sum_probs=53.1
Q ss_pred cccccccccccCceeCCCCCHHHHHHHHhhCCceEEEEEec--CCCcccccchhhhhcccc
Q 018729 270 AVPLRKMIIRRIPRVSEDMPLYDILNEFQKGHSHIAVVYKD--LNEKKEGELFKDNCKKPR 328 (351)
Q Consensus 270 ~~~l~~i~~~~~~~V~~~~~l~~lL~~~~~~~~~~aiVvDe--~g~~~GiVT~~Dil~~l~ 328 (351)
..+++++|.++++++++++++.++++.|.+++.+.++|+|+ +|+++|+||..|+.+.+.
T Consensus 12 ~~~v~dim~~~~~~v~~~~~~~~a~~~~~~~~~~~~pVvd~~~~~~~~Givt~~dl~~~~~ 72 (164)
T 2pfi_A 12 HVRVEHFMNHSITTLAKDTPLEEVVKVVTSTDVTEYPLVESTESQILVGIVQRAQLVQALQ 72 (164)
T ss_dssp SCBHHHHCBCCCCCEETTCBHHHHHHHHHTCCCSEEEEESCTTTCBEEEEEEHHHHHHHHH
T ss_pred CCCHHHHcCCCCeEECCCCcHHHHHHHHHhCCCCceeEEecCCCCEEEEEEEHHHHHHHHH
Confidence 35678887788899999999999999999999999999996 799999999999998764
No 113
>1yav_A Hypothetical protein BSU14130; cystathionine beta synthase (CBS) domain, structural genomics, protein structure initiative, PSI; 2.10A {Bacillus subtilis} SCOP: d.37.1.1
Probab=97.65 E-value=1.8e-05 Score=65.82 Aligned_cols=59 Identities=12% Similarity=-0.035 Sum_probs=52.7
Q ss_pred ccccccccc--cCceeCCCCCHHHHHHHHhhCCceEEEEEecCCCcccccchhhhhccccC
Q 018729 271 VPLRKMIIR--RIPRVSEDMPLYDILNEFQKGHSHIAVVYKDLNEKKEGELFKDNCKKPRG 329 (351)
Q Consensus 271 ~~l~~i~~~--~~~~V~~~~~l~~lL~~~~~~~~~~aiVvDe~g~~~GiVT~~Dil~~l~~ 329 (351)
.++.++|.+ ++++++++.++.++++.|.+++.+.++|+|++|+++|+||..|+++.+..
T Consensus 14 ~~v~~im~~~~~~~~v~~~~~l~~a~~~m~~~~~~~~pVvd~~~~lvGivt~~dl~~~~~~ 74 (159)
T 1yav_A 14 ATVGQFMIEADKVAHVQVGNNLEHALLVLTKTGYTAIPVLDPSYRLHGLIGTNMIMNSIFG 74 (159)
T ss_dssp CBHHHHSEEGGGSCCEETTCBHHHHHHHHHHHCCSEEEEECTTCBEEEEEEHHHHHHHHBC
T ss_pred hhHHHHhCCccceEEECCCCcHHHHHHHHHhCCCcEEEEECCCCCEEEEeEHHHHHHHhhh
Confidence 467787655 78999999999999999999999999999999999999999999987653
No 114
>2j9l_A Chloride channel protein 5; ION channel, ION transport, voltage-gated; HET: ATP; 2.30A {Homo sapiens} SCOP: d.37.1.1 PDB: 2ja3_A*
Probab=97.60 E-value=4.9e-05 Score=64.48 Aligned_cols=60 Identities=13% Similarity=0.191 Sum_probs=52.8
Q ss_pred ccccccccccccCcceEEEeCCCCccHHHHHHHHhcCCcEEeeEcCCCCceeEEeEhhhhccccc
Q 018729 203 LTEKTAKDAMTPISKAFSLDLDATLTLDTLNAIMTMGHSRVPVYSGNPTNIIGLILVKNLLSVDY 267 (351)
Q Consensus 203 l~~~~v~~iMtpr~~v~~v~~~~t~~~e~~~~~~~~~~sr~PV~~~~~d~ivGiv~~kdll~~~~ 267 (351)
..+.+++++|++ ++.++++++++. ++++.+.+++.+++||++ + ++++|+|+.+|++....
T Consensus 105 ~~~~~v~~im~~--~~~~v~~~~~l~-~a~~~m~~~~~~~l~Vvd-~-g~~vGiit~~dll~~l~ 164 (185)
T 2j9l_A 105 PPTLKLRNILDL--SPFTVTDLTPME-IVVDIFRKLGLRQCLVTH-N-GRLLGIITKKDVLKHIA 164 (185)
T ss_dssp CCCEECGGGEES--SCCEEETTSBHH-HHHHHHHHHTCSEEEEEE-T-TEEEEEEEHHHHHHHHH
T ss_pred ccCccHHHhhCc--CCeEeCCCCCHH-HHHHHHHhCCCcEEEEEE-C-CEEEEEEEHHHHHHHHH
Confidence 356789999976 568899999998 999999999999999998 4 89999999999987643
No 115
>2yvy_A MGTE, Mg2+ transporter MGTE; membrane protein, transport protein; 2.30A {Thermus thermophilus} PDB: 2yvz_A
Probab=97.48 E-value=7.2e-05 Score=68.46 Aligned_cols=60 Identities=17% Similarity=0.330 Sum_probs=52.9
Q ss_pred cccccccccccCcceEEEeCCCCccHHHHHHHHhcCCcEEeeEcCCCCceeEEeEhhhhccccc
Q 018729 204 TEKTAKDAMTPISKAFSLDLDATLTLDTLNAIMTMGHSRVPVYSGNPTNIIGLILVKNLLSVDY 267 (351)
Q Consensus 204 ~~~~v~~iMtpr~~v~~v~~~~t~~~e~~~~~~~~~~sr~PV~~~~~d~ivGiv~~kdll~~~~ 267 (351)
.+.+++++|++ ++.+++.++++. ++++.|.+++...+||++++ |+++|+|+..|++....
T Consensus 197 ~~~~v~~im~~--~~~~v~~~~~l~-~a~~~m~~~~~~~lpVvd~~-g~lvGivT~~Dil~~i~ 256 (278)
T 2yvy_A 197 PRTRVAEIMNP--KVVYVRTDTDQE-EVARLMADYDFTVLPVVDEE-GRLVGIVTVDDVLDVLE 256 (278)
T ss_dssp TTCBSTTTSBS--SCCCEETTSBHH-HHHHHHHHHTCSEEEEECTT-SBEEEEEEHHHHHHHC-
T ss_pred CCCcHHHHhCC--CCeEEeCCCCHH-HHHHHHHhcCCCEEEEEeCC-CeEEEEEEHHHHHHHHH
Confidence 56789999976 568899999998 99999999999999999875 89999999999987543
No 116
>3ocm_A Putative membrane protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: ADP; 1.80A {Bordetella parapertussis}
Probab=97.42 E-value=8.9e-05 Score=62.96 Aligned_cols=59 Identities=14% Similarity=0.050 Sum_probs=52.0
Q ss_pred ccccccccc--ccCceeCCCCCHHHHHHHHhhCCceEEEEEecC-CCcccccchhhhhcccc
Q 018729 270 AVPLRKMII--RRIPRVSEDMPLYDILNEFQKGHSHIAVVYKDL-NEKKEGELFKDNCKKPR 328 (351)
Q Consensus 270 ~~~l~~i~~--~~~~~V~~~~~l~~lL~~~~~~~~~~aiVvDe~-g~~~GiVT~~Dil~~l~ 328 (351)
+.+++++|. +++++++++.++.++++.|++++....+|+|++ |+++|+||..|+++.+.
T Consensus 35 ~~~v~diM~~~~~v~~v~~~~tv~ea~~~m~~~~~~~~pVvd~~~~~lvGivt~~Dl~~~~~ 96 (173)
T 3ocm_A 35 ERSIRSIMTPRTDVSWVNIDDDAATIRQQLTAAPHSFFPVCRGSLDEVVGIGRAKDLVADLI 96 (173)
T ss_dssp TSCSTTTSEEGGGCCCEETTSCHHHHHHHHHHSSCSEEEEESSSTTSEEEEEEHHHHHHHHH
T ss_pred CCCHHHhCCcHHHeEEEeCCCCHHHHHHHHHhCCCCEEEEEeCCCCCEEEEEEHHHHHHHHh
Confidence 467889864 467889999999999999999999999999987 89999999999997653
No 117
>2d4z_A Chloride channel protein; CLC chloride channel cytoplasmic domain, CBS domains, ION CH regulatory subunit, transport protein; 3.10A {Torpedo marmorata} SCOP: d.37.1.1
Probab=97.41 E-value=8.9e-05 Score=67.10 Aligned_cols=59 Identities=7% Similarity=0.054 Sum_probs=53.0
Q ss_pred cccccccccccCceeCCCCCHHHHHHHHhhCCceEEEEEecC--CCcccccchhhhhcccc
Q 018729 270 AVPLRKMIIRRIPRVSEDMPLYDILNEFQKGHSHIAVVYKDL--NEKKEGELFKDNCKKPR 328 (351)
Q Consensus 270 ~~~l~~i~~~~~~~V~~~~~l~~lL~~~~~~~~~~aiVvDe~--g~~~GiVT~~Dil~~l~ 328 (351)
+..++++|.+++.+|.+++++.++.+.|.+++.+-.+|||+. |+++|+||..|+++.+.
T Consensus 12 ~~~v~diMt~~vvtv~~~~tv~~~~~lm~~~~~~~~PVVd~~~~~~LvGiIt~~dl~~~l~ 72 (250)
T 2d4z_A 12 NIQVGDIMVRDVTSIASTSTYGDLLHVLRQTKLKFFPFVDTPDTNTLLGSIDRTEVEGLLQ 72 (250)
T ss_dssp SCBTTSSSBSSCCCEETTCBHHHHHHHHHHCCCSEEEEESCTTTCBEEEEEEHHHHHHHHH
T ss_pred CCChHHhcCCCCeEECCCCCHHHHHHHHHhcCCCEEEEEecCCCCeEEEEEEHHHHHHHHH
Confidence 457889988999999999999999999999999999999974 68999999999997653
No 118
>2oux_A Magnesium transporter; 10001B, structural genomics, PSI-2, P structure initiative, nysgxrc; 2.16A {Enterococcus faecalis} SCOP: a.118.26.1 d.37.1.1
Probab=97.36 E-value=9.9e-05 Score=67.96 Aligned_cols=59 Identities=17% Similarity=0.342 Sum_probs=52.8
Q ss_pred cccccccccccCcceEEEeCCCCccHHHHHHHHhcCCcEEeeEcCCCCceeEEeEhhhhcccc
Q 018729 204 TEKTAKDAMTPISKAFSLDLDATLTLDTLNAIMTMGHSRVPVYSGNPTNIIGLILVKNLLSVD 266 (351)
Q Consensus 204 ~~~~v~~iMtpr~~v~~v~~~~t~~~e~~~~~~~~~~sr~PV~~~~~d~ivGiv~~kdll~~~ 266 (351)
.+.+++++|++ ++.++++++++. ++++.+.+++.+++||++++ |+++|+|+..|++...
T Consensus 199 ~~~~v~~im~~--~~~~v~~~~~l~-ea~~~m~~~~~~~lpVVd~~-g~lvGiIT~~Dil~~i 257 (286)
T 2oux_A 199 DDTLIADILNE--RVISVHVGDDQE-DVAQTIRDYDFLAVPVTDYD-DHLLGIVTVDDIIDVI 257 (286)
T ss_dssp TTSBHHHHSBS--CCCCEETTSBHH-HHHHHHHHHTCSEEEEECTT-CBEEEEEEHHHHHHHH
T ss_pred CCCcHHHHcCC--CCeeecCCCCHH-HHHHHHHHcCCcEEEEEcCC-CeEEEEEEHHHHHHHH
Confidence 46789999976 568899999998 99999999999999999865 8999999999998754
No 119
>3org_A CMCLC; transporter, transport protein; 3.50A {Cyanidioschyzon merolae}
Probab=97.31 E-value=0.00017 Score=73.88 Aligned_cols=56 Identities=5% Similarity=-0.030 Sum_probs=48.3
Q ss_pred ccccccccCcceEEEeCCCCccHHHHHHHHhcCCcEEeeEcCCCCceeEEeEhhhhccccc
Q 018729 207 TAKDAMTPISKAFSLDLDATLTLDTLNAIMTMGHSRVPVYSGNPTNIIGLILVKNLLSVDY 267 (351)
Q Consensus 207 ~v~~iMtpr~~v~~v~~~~t~~~e~~~~~~~~~~sr~PV~~~~~d~ivGiv~~kdll~~~~ 267 (351)
+++|+|++ ++.++++++++. |+.+.|.+++.+++||+ ++ |+++|+|+.+|+++...
T Consensus 569 ~v~~iMt~--~pitV~~~~~l~-ea~~~M~~~~i~~lpVv-e~-G~lvGIVT~~Dll~~~~ 624 (632)
T 3org_A 569 SLVVPCDV--SPIVVTSYSLVR-QLHFLFVMLMPSMIYVT-ER-GKLVGIVEREDVAYGYS 624 (632)
T ss_dssp --CCSCCC--CCCEEETTCBHH-HHHHHHHHTCCSEEEEE-ET-TEEEEEEEGGGTEECCC
T ss_pred ccchhhcC--CCceecCCCcHH-HHHHHHHhcCCCEEEEE-EC-CEEEEEEehhhHHHHHh
Confidence 48999987 557899999998 99999999999999999 44 89999999999987654
No 120
>4avf_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase; 2.23A {Pseudomonas aeruginosa}
Probab=97.31 E-value=0.00016 Score=71.69 Aligned_cols=61 Identities=16% Similarity=0.207 Sum_probs=0.0
Q ss_pred cccccccccccCcceEEEeCCCCccHHHHHHHHhcCCcEEeeEcCCCCceeEEeEhhhhcccc
Q 018729 204 TEKTAKDAMTPISKAFSLDLDATLTLDTLNAIMTMGHSRVPVYSGNPTNIIGLILVKNLLSVD 266 (351)
Q Consensus 204 ~~~~v~~iMtpr~~v~~v~~~~t~~~e~~~~~~~~~~sr~PV~~~~~d~ivGiv~~kdll~~~ 266 (351)
.+.+++++|+|+.++++++.++++. ++++.+.+++...+||+|++ ++++|+++.+|+++..
T Consensus 145 ~~~~V~~vMtp~~~~vtv~~~~~l~-ea~~~m~~~~i~~lpVVDe~-g~lvGiIT~~Dil~~~ 205 (490)
T 4avf_A 145 AGDTVAAIMTPKDKLVTAREGTPLE-EMKAKLYENRIEKMLVVDEN-FYLRGLVTFRDIEKAK 205 (490)
T ss_dssp ---------------------------------------------------------------
T ss_pred cCCcHHHHhccCCCCEEECCCCcHH-HHHHHHHHcCCCEEEEEcCC-CcEEEEEehHHhhhhc
Confidence 4578999999876788999999998 99999999999999999876 8999999999998754
No 121
>2zy9_A Mg2+ transporter MGTE; membrane protien, metal transport; 2.94A {Thermus thermophilus} PDB: 2yvx_A
Probab=97.16 E-value=0.00027 Score=69.80 Aligned_cols=59 Identities=17% Similarity=0.350 Sum_probs=53.2
Q ss_pred cccccccccccCcceEEEeCCCCccHHHHHHHHhcCCcEEeeEcCCCCceeEEeEhhhhcccc
Q 018729 204 TEKTAKDAMTPISKAFSLDLDATLTLDTLNAIMTMGHSRVPVYSGNPTNIIGLILVKNLLSVD 266 (351)
Q Consensus 204 ~~~~v~~iMtpr~~v~~v~~~~t~~~e~~~~~~~~~~sr~PV~~~~~d~ivGiv~~kdll~~~ 266 (351)
.+.+++++|++ ++.++++++++. ++.+.+.+++...+||+|++ ++++|+++.+|++...
T Consensus 217 ~~~~v~dim~~--~~~~v~~~~~l~-ea~~~m~~~~~~~lpVVDe~-g~lvGiIT~~Dil~~i 275 (473)
T 2zy9_A 217 PRTRVAEIMNP--KVVYVRTDTDQE-EVARLMADYDFTVLPVVDEE-GRLVGIVTVDDVLDVL 275 (473)
T ss_dssp TTSBGGGTSBS--SCCCEESSSBHH-HHHHHHHHHTCSEEEEECTT-SBEEEEEEHHHHHHHH
T ss_pred CCCcHHHHhCC--CCeEEeCCCcHH-HHHHHHHhcCCcEEEEEcCC-CEEEEEEehHhhHHHH
Confidence 57889999975 668899999998 99999999999999999876 8999999999998754
No 122
>4fxs_A Inosine-5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.24A {Vibrio cholerae o1 biovar el tor}
Probab=97.15 E-value=0.00022 Score=70.78 Aligned_cols=61 Identities=16% Similarity=0.240 Sum_probs=44.3
Q ss_pred cccccccccccCcceEEEeCCCCccHHHHHHHHhcCCcEEeeEcCCCCceeEEeEhhhhcccc
Q 018729 204 TEKTAKDAMTPISKAFSLDLDATLTLDTLNAIMTMGHSRVPVYSGNPTNIIGLILVKNLLSVD 266 (351)
Q Consensus 204 ~~~~v~~iMtpr~~v~~v~~~~t~~~e~~~~~~~~~~sr~PV~~~~~d~ivGiv~~kdll~~~ 266 (351)
.+.+++++|+|+.++++++.+.++. ++++.+.+++..++||+|++ ++++|+++.+|+++..
T Consensus 147 ~~~~v~diM~p~~~~vtv~~~~~l~-ea~~~m~~~~i~~lpVVDe~-G~l~GiIT~~DIl~~~ 207 (496)
T 4fxs_A 147 LTKSVAAVMTPKERLATVKEGATGA-EVQEKMHKARVEKILVVNDE-FQLKGMITAKDFHKAE 207 (496)
T ss_dssp TTSBGGGTSEEGGGCCEEECC-----CGGGTCC---CCCEEEECTT-SBCCEEECCC-----C
T ss_pred CCCcHHHHhcCCCCCEEECCCCCHH-HHHHHHHHcCCCEEEEEcCC-CCEEEeehHhHHHHhh
Confidence 4678999999877788999999998 99999999999999999876 8999999999998753
No 123
>3pc3_A CG1753, isoform A; CBS, synthase, PLP, heme, aminoacrylate, lyase; HET: HEM P1T; 1.55A {Drosophila melanogaster} PDB: 3pc2_A* 3pc4_A*
Probab=97.06 E-value=0.00023 Score=71.26 Aligned_cols=58 Identities=7% Similarity=-0.039 Sum_probs=53.3
Q ss_pred ccccccccccCceeCCC-CCHHHHHHHHhhCCceEEEEEe-cCCCcccccchhhhhcccc
Q 018729 271 VPLRKMIIRRIPRVSED-MPLYDILNEFQKGHSHIAVVYK-DLNEKKEGELFKDNCKKPR 328 (351)
Q Consensus 271 ~~l~~i~~~~~~~V~~~-~~l~~lL~~~~~~~~~~aiVvD-e~g~~~GiVT~~Dil~~l~ 328 (351)
.+++++|.+++.+++++ +++.++++.|++++....+|+| +.|+++|+||..|+++.+.
T Consensus 384 ~~V~diM~~~~vtv~~~~~tv~ea~~~m~~~~~~~lpVvd~~~g~lvGiVt~~Dll~~l~ 443 (527)
T 3pc3_A 384 LAIAELELPAPPVILKSDATVGEAIALMKKHRVDQLPVVDQDDGSVLGVVGQETLITQIV 443 (527)
T ss_dssp SBGGGGCCCCCSCCEETTCBHHHHHHHHHHHTCSEEEEECTTTCCEEEEEEHHHHHHHHH
T ss_pred CcHHHhCcCCCeEEcCCCCcHHHHHHHHHHcCCCeEEEEECCCCEEEEEEEHHHHHHHHH
Confidence 56889888899999999 9999999999999999999999 7899999999999997664
No 124
>1vrd_A Inosine-5'-monophosphate dehydrogenase; TM1347, structural G joint center for structural genomics, JCSG, protein structu initiative, PSI; 2.18A {Thermotoga maritima} SCOP: c.1.5.1
Probab=97.05 E-value=0.00034 Score=69.43 Aligned_cols=61 Identities=28% Similarity=0.418 Sum_probs=3.6
Q ss_pred cccccccccccCcceEEEeCCCCccHHHHHHHHhcCCcEEeeEcCCCCceeEEeEhhhhcccc
Q 018729 204 TEKTAKDAMTPISKAFSLDLDATLTLDTLNAIMTMGHSRVPVYSGNPTNIIGLILVKNLLSVD 266 (351)
Q Consensus 204 ~~~~v~~iMtpr~~v~~v~~~~t~~~e~~~~~~~~~~sr~PV~~~~~d~ivGiv~~kdll~~~ 266 (351)
.+.+++++|+|+.++.++++++++. ++++.+.+++..++||++++ ++++|+++.+|+++..
T Consensus 153 ~~~~v~~im~~~~~~~~v~~~~~l~-ea~~~m~~~~~~~lpVVd~~-g~lvGiIt~~Dll~~~ 213 (494)
T 1vrd_A 153 LSKKIKDLMTPREKLIVAPPDISLE-KAKEILHQHRIEKLPLVSKD-NKLVGLITIKDIMSVI 213 (494)
T ss_dssp ----------------------------------------------------------CHHHH
T ss_pred CCCcHHHHhCCCCCCeEECCCCCHH-HHHHHHHHcCCcEEEEEcCC-CeEEEEEEHHHHHhhh
Confidence 3568999999866788999999998 99999999999999999876 8999999999998754
No 125
>1jcn_A Inosine monophosphate dehydrogenase I; IMPD, IMPDH, guanine nucleotide synthesis, oxidoreductase; HET: CPR; 2.50A {Homo sapiens} SCOP: c.1.5.1 d.37.1.1 PDB: 1jr1_A* 1nf7_A* 1b3o_A* 1nfb_A*
Probab=96.88 E-value=0.0008 Score=67.08 Aligned_cols=61 Identities=13% Similarity=0.218 Sum_probs=42.4
Q ss_pred cccccccccccCcceEEEeCCCCccHHHHHHHHhcCCcEEeeEcCCCCceeEEeEhhhhcccc
Q 018729 204 TEKTAKDAMTPISKAFSLDLDATLTLDTLNAIMTMGHSRVPVYSGNPTNIIGLILVKNLLSVD 266 (351)
Q Consensus 204 ~~~~v~~iMtpr~~v~~v~~~~t~~~e~~~~~~~~~~sr~PV~~~~~d~ivGiv~~kdll~~~ 266 (351)
.+.+++++|+|+.++.++++++++. ++++.+.+++..++||++++ ++++|+++.+|+++..
T Consensus 171 ~~~~v~~vm~~~~~~~tv~~~~~l~-ea~~~m~~~~~~~lpVVd~~-g~lvGiIt~~Dll~~~ 231 (514)
T 1jcn_A 171 HTTLLSEVMTPRIELVVAPAGVTLK-EANEILQRSKKGKLPIVNDC-DELVAIIARTDLKKNR 231 (514)
T ss_dssp ----------CCBCCCCEETTCCST-TTTTHHHHHTCSCCCEESSS-SCCC----CCCCSSCC
T ss_pred CCCCHHHHhCCCCCCeEECCCCCHH-HHHHHHHHcCCCcccEECCC-CeEEEEEEHHHHHHHh
Confidence 4567999999766778999999998 99999999999999999876 8999999999998764
No 126
>2cu0_A Inosine-5'-monophosphate dehydrogenase; structural genomics, pyrococcus horikoshii OT3, riken structural genomics/PROT initiative, RSGI; HET: XMP; 2.10A {Pyrococcus horikoshii} SCOP: c.1.5.1
Probab=96.79 E-value=0.00077 Score=66.75 Aligned_cols=108 Identities=17% Similarity=0.214 Sum_probs=21.3
Q ss_pred cccccccccccCcceEEEeCCCCccHHHHHHHHhcCCcEEeeEcCCCCceeEEeEhhhhccccccccccccccccccC--
Q 018729 204 TEKTAKDAMTPISKAFSLDLDATLTLDTLNAIMTMGHSRVPVYSGNPTNIIGLILVKNLLSVDYRDAVPLRKMIIRRI-- 281 (351)
Q Consensus 204 ~~~~v~~iMtpr~~v~~v~~~~t~~~e~~~~~~~~~~sr~PV~~~~~d~ivGiv~~kdll~~~~~~~~~l~~i~~~~~-- 281 (351)
.+.+++++|++ ++.++++++++. ++++.+.+++...+||++++ ++++|+++.+|+++...... ...+...+-.
T Consensus 148 ~~~~v~~im~~--~~~~v~~~~~l~-eal~~m~~~~~~~lpVVde~-g~lvGiiT~~Dil~~~~~~~-~~~~~~g~~~v~ 222 (486)
T 2cu0_A 148 EGKLVKELMTK--EVITVPESIEVE-EALKIMIENRIDRLPVVDER-GKLVGLITMSDLVARKKYKN-AVRDENGELLVA 222 (486)
T ss_dssp ---------------------------------------------------------------CCTT-CCBCTTSCBCCE
T ss_pred CCCCHHHHccC--CCeEECCcCcHH-HHHHHHHHcCCCEEEEEecC-CeEEEEEEHHHHHHhhhccc-cccccCCceeec
Confidence 35689999986 568899999998 99999999999999999875 89999999999987643211 1111100000
Q ss_pred ceeCCCCCHHHHHHHHhhCCceEEEEEec-CCCcccccc
Q 018729 282 PRVSEDMPLYDILNEFQKGHSHIAVVYKD-LNEKKEGEL 319 (351)
Q Consensus 282 ~~V~~~~~l~~lL~~~~~~~~~~aiVvDe-~g~~~GiVT 319 (351)
..++. .. .+.+..+.+.+.... |+|. .|...|.++
T Consensus 223 ~~~~~-~~-~~~a~~l~~~gvd~l-vvdta~G~~~~~L~ 258 (486)
T 2cu0_A 223 AAVSP-FD-IKRAIELDKAGVDVI-VVDTAHAHNLKAIK 258 (486)
T ss_dssp EEECT-TC-HHHHHHHHHTTCSEE-EEECSCCCCHHHHH
T ss_pred ceech-hh-HHHHHHHHHhcCCce-EEEecCCcEeehhh
Confidence 11222 22 455677888887764 5563 566555554
No 127
>4af0_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase, GTP biosynthesis, drug resistance; HET: MOA IMP; 2.20A {Cryptococcus neoformans} PDB: 4af0_B*
Probab=96.63 E-value=0.00074 Score=66.72 Aligned_cols=113 Identities=13% Similarity=0.119 Sum_probs=20.1
Q ss_pred cccccccccccCcceEEEeCCCCccHHHHHHHHhcCCcEEeeEcCCCCceeEEeEhhhhccccccccc-ccccc-ccccC
Q 018729 204 TEKTAKDAMTPISKAFSLDLDATLTLDTLNAIMTMGHSRVPVYSGNPTNIIGLILVKNLLSVDYRDAV-PLRKM-IIRRI 281 (351)
Q Consensus 204 ~~~~v~~iMtpr~~v~~v~~~~t~~~e~~~~~~~~~~sr~PV~~~~~d~ivGiv~~kdll~~~~~~~~-~l~~i-~~~~~ 281 (351)
.+.+++++||+ ++++++.+.+++ |+.+++.+++..++||+|++ ++++|+++.+|+.+....... .+.+- -.+--
T Consensus 198 ~~~~V~evMT~--~lvt~~~~~~le-eA~~iL~~~kieklpVVd~~-g~LvGlIT~kDi~k~~~~p~A~k~d~~grL~Vg 273 (556)
T 4af0_A 198 AETPIKSVMTT--EVVTGSSPITLE-KANSLLRETKKGKLPIVDSN-GHLVSLVARSDLLKNQNYPYASKVPESKQLYCG 273 (556)
T ss_dssp ----------------------------------------------------------------CTTCCBCTTTCCBCCE
T ss_pred cceEhhhhccc--ceEEecCCCCHH-HHHHHHHHccccceeEEccC-CcEEEEEEechhhhhhhCCcchhcchhhceeeE
Confidence 35789999997 689999999998 99999999999999999876 899999999999875321100 01110 00000
Q ss_pred ceeCCCCCHHHHHHHHhhCCceEEEEEe-cCCCcccccchh
Q 018729 282 PRVSEDMPLYDILNEFQKGHSHIAVVYK-DLNEKKEGELFK 321 (351)
Q Consensus 282 ~~V~~~~~l~~lL~~~~~~~~~~aiVvD-e~g~~~GiVT~~ 321 (351)
.-|.-...-.+-.+.+.+.+....+| | -+|.-.+++..-
T Consensus 274 AAVgv~~d~~eR~~aLv~AGvD~ivi-D~ahGhs~~v~~~i 313 (556)
T 4af0_A 274 AAIGTRPGDKDRLKLLAEAGLDVVVL-DSSQGNSVYQIEFI 313 (556)
T ss_dssp EEECSSHHHHHHHHHHHHTTCCEEEE-CCSCCCSHHHHHHH
T ss_pred EEeccCccHHHHHHHHHhcCCcEEEE-eccccccHHHHHHH
Confidence 11221222345556667777766544 5 455555544433
No 128
>1zfj_A Inosine monophosphate dehydrogenase; IMPDH, CBS domains, oxidoreductase; HET: IMP; 1.90A {Streptococcus pyogenes} SCOP: c.1.5.1 d.37.1.1
Probab=96.45 E-value=0.0025 Score=62.97 Aligned_cols=61 Identities=15% Similarity=0.227 Sum_probs=53.2
Q ss_pred cccccccccccCcceEEEeCCCCccHHHHHHHHhcCCcEEeeEcCCCCceeEEeEhhhhccccc
Q 018729 204 TEKTAKDAMTPISKAFSLDLDATLTLDTLNAIMTMGHSRVPVYSGNPTNIIGLILVKNLLSVDY 267 (351)
Q Consensus 204 ~~~~v~~iMtpr~~v~~v~~~~t~~~e~~~~~~~~~~sr~PV~~~~~d~ivGiv~~kdll~~~~ 267 (351)
.+.+++++|++ .++++++.++++. ++++.+.+++..++||++++ ++++|+++.+|++....
T Consensus 150 ~~~~v~~im~~-~~~~~v~~~~~l~-~a~~~m~~~~~~~lpVVd~~-g~lvGivt~~Dil~~~~ 210 (491)
T 1zfj_A 150 YNAPISEHMTS-EHLVTAAVGTDLE-TAERILHEHRIEKLPLVDNS-GRLSGLITIKDIEKVIE 210 (491)
T ss_dssp SSSBTTTSCCC-SCCCCEETTCCHH-HHHHHHHHTTCSEEEEECTT-SBEEEEEEHHHHHHHHH
T ss_pred CCCcHHHHcCC-CCCEEECCCCCHH-HHHHHHHHcCCCEEEEEcCC-CcEEEEEEHHHHHHHHh
Confidence 56789999985 2567899999998 99999999999999999876 89999999999987543
No 129
>1tif_A IF3-N, translation initiation factor 3; IF3 N-terminal domain, ribosome binding factor; 1.80A {Geobacillus stearothermophilus} SCOP: d.15.8.1
Probab=32.23 E-value=18 Score=25.95 Aligned_cols=24 Identities=0% Similarity=-0.136 Sum_probs=20.1
Q ss_pred eEEEEEecCCCcccccchhhhhcc
Q 018729 303 HIAVVYKDLNEKKEGELFKDNCKK 326 (351)
Q Consensus 303 ~~aiVvDe~g~~~GiVT~~Dil~~ 326 (351)
+..-|+|++|..+|+++..+.++.
T Consensus 14 ~eVrli~~~Ge~lGv~~~~eAl~~ 37 (78)
T 1tif_A 14 REVRLIDQNGDQLGIKSKQEALEI 37 (78)
T ss_dssp SEEEEECTTSCEEEEEEHHHHHHH
T ss_pred CEEEEECCCCcCCCcccHHHHHHH
Confidence 445588999999999999998864
No 130
>2jaf_A Halorhodopsin, HR; chromophore, chloride pump, ION transport, membrane, chloride, receptor, ION pump, transport, sensory transduction; HET: BOG PLM RET; 1.7A {Halobacterium salinarium} PDB: 2jag_A* 1e12_A*
Probab=30.58 E-value=2.8e+02 Score=24.49 Aligned_cols=39 Identities=15% Similarity=0.270 Sum_probs=23.3
Q ss_pred HHHHHhhHHHHHHHhhHHHHHHHHHHHHHHHHHHHhHHHHH
Q 018729 111 LMFGEILPQAVCTRYGLTVGATMAPIVRVLLCLFFPISYPI 151 (351)
Q Consensus 111 lvfgEiiPK~la~~~~~~~a~~~a~~~~~~~~l~~P~~~~~ 151 (351)
.++++. .|+...+ ..+-+....+.+-.+.|..||+.|.+
T Consensus 178 ~l~~~~-~~~a~~~-~v~~~f~~l~~~v~v~W~iYPI~w~l 216 (274)
T 2jaf_A 178 ALVTDW-AASASSA-GTAEIFDTLRVLVVVLWLGYPIVWAV 216 (274)
T ss_dssp HHHTHH-HHHHHHH-TCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHH-HHHhhhh-HHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 344554 6654444 44444444555566778889998855
No 131
>2k8y_A Uncharacterized protein MJ0187; regulatory subunit of the BUD32 kinase, component of the keops complex, structural genomics, PSI-2; NMR {Methanocaldococcus jannaschii} PDB: 3enh_C*
Probab=24.13 E-value=31 Score=27.97 Aligned_cols=65 Identities=17% Similarity=0.247 Sum_probs=43.2
Q ss_pred CceeCCCCCHHHHHHHHhhCCceEEEEEecCCCcccccchhhhhccccCCCCCCCCcccchhHHHHhhhcC
Q 018729 281 IPRVSEDMPLYDILNEFQKGHSHIAVVYKDLNEKKEGELFKDNCKKPRGQPEKSSQKGEMDAATFILNCFK 351 (351)
Q Consensus 281 ~~~V~~~~~l~~lL~~~~~~~~~~aiVvDe~g~~~GiVT~~Dil~~l~~~~~~~~~~~~~~~~~~~~~~~~ 351 (351)
.++..++..+.++++.|--+..+..+|++.. -+.+++.+.+.|....+...+...++.-++|.||
T Consensus 63 l~~lSg~rqIseAlk~fGi~~~~~~vv~~~~------~~~~~v~~~l~g~~~~~~~~~~~~d~~~ikK~yk 127 (150)
T 2k8y_A 63 LVRASGQRQIHEAIKIIGAKDGNVCLICEDE------ETFRKIYELIGGEIDDSVLEINEDKERLIREIFK 127 (150)
T ss_dssp HHHTTTSCCHHHHHHHHBCCSEEEEEEESCH------HHHHHHHHHHCCEECGGGGSCCHHHHHHHHHHTC
T ss_pred hhhhcccchHHHHHHHhCCCCCCEEEEEeCC------ccHHHHHHHhcCcccCCcccCChhhHHHHHHHcC
Confidence 3568899999999999866656666666521 1666666666654443334444566777888776
No 132
>3arc_L Photosystem II reaction center protein L; PSII, membrane-protein complex, transmembrane alpha-helix, E transport, photosynthesis; HET: OEX CLA PHO BCR PL9 SQD LMG UNL LMT HTG DGD LHG HEM; 1.90A {Thermosynechococcus vulcanus} PDB: 1s5l_L* 3a0b_L* 3a0h_L* 2axt_L* 3bz1_L* 3bz2_L* 3kzi_L* 3prq_L* 3prr_L*
Probab=23.01 E-value=88 Score=18.70 Aligned_cols=23 Identities=9% Similarity=0.294 Sum_probs=12.9
Q ss_pred ccchhHHHHHHHHHHHHHHHHHH
Q 018729 9 CCGTMFFVFVLGIIALVCFAGLM 31 (351)
Q Consensus 9 ~~~~~~~~~l~~~~~li~~sa~f 31 (351)
+-+.-.|-.+++.++.+++|..|
T Consensus 13 NRTSLy~GLLlifvlavlFssyf 35 (37)
T 3arc_L 13 NRTSLYLGLLLILVLALLFSSYF 35 (37)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHH
T ss_pred chhhHHHHHHHHHHHHHHhhhhc
Confidence 44455565555555556666554
Done!