Query 018731
Match_columns 351
No_of_seqs 284 out of 2720
Neff 8.3
Searched_HMMs 29240
Date Mon Mar 25 05:11:42 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/018731.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/018731hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3t7v_A Methylornithine synthas 100.0 3.2E-29 1.1E-33 239.1 19.8 245 56-313 13-267 (350)
2 3iix_A Biotin synthetase, puta 100.0 1.5E-26 5E-31 220.3 26.5 233 65-313 16-258 (348)
3 1r30_A Biotin synthase; SAM ra 99.9 2.5E-25 8.7E-30 213.7 26.7 229 68-313 34-275 (369)
4 2qgq_A Protein TM_1862; alpha- 99.9 1.1E-23 3.8E-28 197.0 21.4 198 103-303 4-212 (304)
5 1olt_A Oxygen-independent copr 99.9 3.8E-22 1.3E-26 196.6 20.8 218 104-329 54-295 (457)
6 3c8f_A Pyruvate formate-lyase 99.8 3.3E-18 1.1E-22 153.6 16.4 201 106-318 22-243 (245)
7 1tv8_A MOAA, molybdenum cofact 99.8 1.2E-17 4E-22 158.3 20.7 193 103-306 14-218 (340)
8 2yx0_A Radical SAM enzyme; pre 99.7 1.4E-15 4.7E-20 144.2 20.1 194 109-313 76-304 (342)
9 2z2u_A UPF0026 protein MJ0257; 99.6 6.4E-15 2.2E-19 137.7 14.2 199 104-319 52-289 (311)
10 3rfa_A Ribosomal RNA large sub 99.5 1.9E-13 6.4E-18 131.4 18.8 196 109-318 121-341 (404)
11 2a5h_A L-lysine 2,3-aminomutas 99.5 5.1E-13 1.7E-17 129.8 18.8 163 104-282 116-289 (416)
12 3can_A Pyruvate-formate lyase- 99.2 1E-09 3.4E-14 94.2 16.0 157 149-319 5-179 (182)
13 4fhd_A Spore photoproduct lyas 98.3 2.3E-06 7.9E-11 80.8 9.6 162 107-274 111-282 (368)
14 2cw6_A Hydroxymethylglutaryl-C 97.9 0.00017 5.8E-09 66.5 13.9 145 130-283 23-176 (298)
15 1ydo_A HMG-COA lyase; TIM-barr 97.7 0.0028 9.6E-08 58.5 18.0 141 130-282 24-176 (307)
16 1ydn_A Hydroxymethylglutaryl-C 97.7 0.0011 3.8E-08 60.8 15.2 144 131-283 23-175 (295)
17 2ftp_A Hydroxymethylglutaryl-C 97.4 0.0021 7.3E-08 59.2 13.8 145 130-283 26-179 (302)
18 3ble_A Citramalate synthase fr 97.1 0.009 3.1E-07 55.8 14.6 144 130-282 37-188 (337)
19 3ivs_A Homocitrate synthase, m 97.1 0.039 1.3E-06 53.0 18.8 141 130-282 57-199 (423)
20 3eeg_A 2-isopropylmalate synth 97.0 0.043 1.5E-06 50.9 17.7 141 130-282 24-170 (325)
21 1nvm_A HOA, 4-hydroxy-2-oxoval 97.0 0.019 6.5E-07 53.8 15.2 137 130-282 26-168 (345)
22 3ewb_X 2-isopropylmalate synth 96.9 0.13 4.6E-06 46.8 20.1 141 130-282 23-169 (293)
23 2ztj_A Homocitrate synthase; ( 96.8 0.1 3.6E-06 49.4 18.9 137 130-282 21-163 (382)
24 3rmj_A 2-isopropylmalate synth 96.5 0.17 5.8E-06 47.7 18.1 138 130-282 30-176 (370)
25 2nx9_A Oxaloacetate decarboxyl 96.3 0.061 2.1E-06 52.3 14.2 135 130-282 26-177 (464)
26 1rqb_A Transcarboxylase 5S sub 96.2 0.067 2.3E-06 52.9 13.6 135 130-282 43-194 (539)
27 4e38_A Keto-hydroxyglutarate-a 94.4 1.6 5.3E-05 38.3 15.1 112 131-283 43-154 (232)
28 2yci_X 5-methyltetrahydrofolat 94.3 1.3 4.6E-05 39.7 14.9 135 131-275 31-192 (271)
29 1eye_A DHPS 1, dihydropteroate 94.1 2.2 7.7E-05 38.4 16.0 137 131-275 26-199 (280)
30 1aj0_A DHPS, dihydropteroate s 93.8 2.3 7.9E-05 38.3 15.4 138 131-275 35-207 (282)
31 3lab_A Putative KDPG (2-keto-3 93.7 1.5 5.2E-05 37.9 13.4 116 131-283 22-139 (217)
32 2vp8_A Dihydropteroate synthas 92.7 0.51 1.7E-05 43.4 9.4 138 131-274 62-238 (318)
33 3tr9_A Dihydropteroate synthas 92.6 2.7 9.3E-05 38.4 14.0 137 131-274 46-223 (314)
34 3fst_A 5,10-methylenetetrahydr 92.4 2.7 9.3E-05 38.3 13.9 120 131-268 94-223 (304)
35 3inp_A D-ribulose-phosphate 3- 92.3 1.4 4.8E-05 38.9 11.4 151 131-315 37-193 (246)
36 2dqw_A Dihydropteroate synthas 92.3 1.6 5.5E-05 39.6 12.0 138 131-275 49-219 (294)
37 3dxi_A Putative aldolase; TIM 92.0 1.6 5.5E-05 40.1 11.9 136 130-282 20-162 (320)
38 2bdq_A Copper homeostasis prot 91.9 1.5 5.1E-05 38.1 10.8 130 135-286 77-210 (224)
39 3usb_A Inosine-5'-monophosphat 91.8 5.9 0.0002 38.8 16.4 134 135-286 256-391 (511)
40 3bg3_A Pyruvate carboxylase, m 91.7 2.7 9.2E-05 43.0 14.2 135 130-282 121-280 (718)
41 2y5s_A DHPS, dihydropteroate s 91.5 3.5 0.00012 37.3 13.4 138 131-276 43-217 (294)
42 2r91_A 2-keto-3-deoxy-(6-phosp 90.8 4 0.00014 36.7 13.1 100 197-317 23-124 (286)
43 4fxs_A Inosine-5'-monophosphat 90.8 4.7 0.00016 39.3 14.4 130 136-286 232-366 (496)
44 3na8_A Putative dihydrodipicol 90.8 3.5 0.00012 37.7 12.8 93 180-282 25-125 (315)
45 4avf_A Inosine-5'-monophosphat 90.7 9.3 0.00032 37.1 16.5 133 135-286 229-364 (490)
46 1w3i_A EDA, 2-keto-3-deoxy glu 90.6 4 0.00014 36.8 13.0 106 191-317 14-125 (293)
47 2nuw_A 2-keto-3-deoxygluconate 90.3 4.1 0.00014 36.7 12.8 106 191-317 14-125 (288)
48 1qwg_A PSL synthase;, (2R)-pho 90.1 9 0.00031 33.7 14.1 129 132-282 24-167 (251)
49 4af0_A Inosine-5'-monophosphat 90.0 3 0.0001 41.0 12.0 134 135-286 281-416 (556)
50 1vzw_A Phosphoribosyl isomeras 89.6 0.49 1.7E-05 41.4 5.8 76 135-217 33-108 (244)
51 1tx2_A DHPS, dihydropteroate s 89.6 3.8 0.00013 37.2 11.8 137 132-275 61-226 (297)
52 1twd_A Copper homeostasis prot 89.4 2.6 9E-05 37.3 10.2 121 136-283 75-198 (256)
53 2y88_A Phosphoribosyl isomeras 89.2 0.44 1.5E-05 41.6 5.2 76 135-217 32-107 (244)
54 3qja_A IGPS, indole-3-glycerol 89.0 11 0.00038 33.6 14.4 118 135-284 73-190 (272)
55 1vhc_A Putative KHG/KDPG aldol 88.9 11 0.00036 32.6 14.7 112 131-283 26-137 (224)
56 3e96_A Dihydrodipicolinate syn 88.6 3.4 0.00012 37.8 10.9 97 176-282 8-112 (316)
57 3nav_A Tryptophan synthase alp 88.4 2.1 7.1E-05 38.4 9.1 52 228-282 78-131 (271)
58 1tqj_A Ribulose-phosphate 3-ep 88.4 2.4 8.1E-05 36.9 9.3 154 132-315 15-171 (230)
59 3cpr_A Dihydrodipicolinate syn 88.3 6.9 0.00024 35.5 12.7 76 197-282 41-117 (304)
60 3vnd_A TSA, tryptophan synthas 88.2 1.9 6.5E-05 38.5 8.7 110 168-282 4-129 (267)
61 3flu_A DHDPS, dihydrodipicolin 88.2 6.3 0.00022 35.6 12.4 76 197-282 32-108 (297)
62 3tsm_A IGPS, indole-3-glycerol 88.0 14 0.00049 32.9 16.1 118 134-283 79-196 (272)
63 1xky_A Dihydrodipicolinate syn 87.8 6.5 0.00022 35.6 12.2 76 197-282 37-113 (301)
64 2ehh_A DHDPS, dihydrodipicolin 87.6 6.5 0.00022 35.4 12.1 76 197-282 25-101 (294)
65 3qze_A DHDPS, dihydrodipicolin 87.6 7.4 0.00025 35.5 12.5 76 197-282 48-124 (314)
66 2yxg_A DHDPS, dihydrodipicolin 87.5 6 0.0002 35.6 11.7 76 197-282 25-101 (289)
67 2vc6_A MOSA, dihydrodipicolina 87.4 7.8 0.00027 34.8 12.5 76 197-282 25-101 (292)
68 3si9_A DHDPS, dihydrodipicolin 87.3 6.6 0.00023 35.8 12.0 76 197-282 47-123 (315)
69 3m5v_A DHDPS, dihydrodipicolin 87.1 11 0.00037 34.1 13.3 77 197-282 32-109 (301)
70 3apt_A Methylenetetrahydrofola 87.1 2.1 7.3E-05 39.1 8.5 111 131-258 83-208 (310)
71 2rfg_A Dihydrodipicolinate syn 87.0 6.7 0.00023 35.4 11.8 76 197-282 25-101 (297)
72 2ftp_A Hydroxymethylglutaryl-C 86.7 2.4 8.3E-05 38.4 8.7 126 131-274 156-284 (302)
73 3daq_A DHDPS, dihydrodipicolin 86.7 7 0.00024 35.2 11.7 76 197-282 27-103 (292)
74 1f6k_A N-acetylneuraminate lya 86.6 8 0.00027 34.8 12.1 76 197-282 28-105 (293)
75 3d0c_A Dihydrodipicolinate syn 86.5 7.5 0.00025 35.4 11.9 101 197-316 37-138 (314)
76 3ctl_A D-allulose-6-phosphate 86.2 6.7 0.00023 34.1 10.9 148 132-314 11-164 (231)
77 3fkr_A L-2-keto-3-deoxyarabona 86.2 9.3 0.00032 34.7 12.3 76 197-282 33-109 (309)
78 3h5d_A DHDPS, dihydrodipicolin 86.1 17 0.00057 33.0 14.0 77 196-282 31-109 (311)
79 3l21_A DHDPS, dihydrodipicolin 86.1 6 0.00021 35.9 11.0 76 197-282 40-116 (304)
80 3tak_A DHDPS, dihydrodipicolin 86.0 7.7 0.00026 34.9 11.6 76 197-282 26-102 (291)
81 1mxs_A KDPG aldolase; 2-keto-3 85.9 16 0.00055 31.5 15.0 111 132-283 36-146 (225)
82 3hbl_A Pyruvate carboxylase; T 85.8 26 0.00088 37.9 17.2 134 131-282 552-711 (1150)
83 1o5k_A DHDPS, dihydrodipicolin 85.8 7 0.00024 35.5 11.3 76 197-282 37-113 (306)
84 3b4u_A Dihydrodipicolinate syn 85.7 9.7 0.00033 34.3 12.1 76 197-282 28-104 (294)
85 2v9d_A YAGE; dihydrodipicolini 85.7 6.9 0.00023 36.2 11.3 76 197-282 56-132 (343)
86 1thf_D HISF protein; thermophI 85.6 4.4 0.00015 35.3 9.6 79 133-217 29-107 (253)
87 2ojp_A DHDPS, dihydrodipicolin 85.5 6.1 0.00021 35.5 10.7 76 197-282 26-102 (292)
88 3ble_A Citramalate synthase fr 85.4 4.2 0.00014 37.5 9.7 122 132-274 167-289 (337)
89 2r8w_A AGR_C_1641P; APC7498, d 85.3 7.1 0.00024 35.9 11.2 76 197-282 59-135 (332)
90 2wkj_A N-acetylneuraminate lya 85.1 8.8 0.0003 34.7 11.6 76 197-282 36-112 (303)
91 1wbh_A KHG/KDPG aldolase; lyas 85.1 17 0.00059 31.0 14.3 112 131-283 25-136 (214)
92 3tdn_A FLR symmetric alpha-bet 84.8 2.1 7.3E-05 37.4 7.1 78 134-217 35-112 (247)
93 3noy_A 4-hydroxy-3-methylbut-2 84.7 25 0.00085 32.6 14.5 126 131-282 43-182 (366)
94 1vc4_A Indole-3-glycerol phosp 84.6 11 0.00036 33.3 11.6 119 134-285 65-183 (254)
95 1qpo_A Quinolinate acid phosph 84.6 2.6 8.9E-05 38.0 7.6 67 137-214 204-270 (284)
96 3eb2_A Putative dihydrodipicol 84.4 8.7 0.0003 34.7 11.2 76 197-282 29-105 (300)
97 2cw6_A Hydroxymethylglutaryl-C 84.0 4.8 0.00016 36.4 9.3 125 131-274 153-281 (298)
98 1h5y_A HISF; histidine biosynt 84.0 4.2 0.00015 35.0 8.7 77 133-215 32-108 (253)
99 1h1y_A D-ribulose-5-phosphate 83.9 11 0.00038 32.3 11.3 130 132-288 17-149 (228)
100 3ewb_X 2-isopropylmalate synth 83.9 6 0.00021 35.7 9.8 126 131-274 147-276 (293)
101 2y7e_A 3-keto-5-aminohexanoate 83.9 9.1 0.00031 34.4 10.8 84 129-215 29-116 (282)
102 2vef_A Dihydropteroate synthas 83.3 13 0.00044 33.9 11.8 76 131-211 30-110 (314)
103 3a5f_A Dihydrodipicolinate syn 83.2 5.7 0.00019 35.8 9.4 81 191-282 17-102 (291)
104 3iwp_A Copper homeostasis prot 83.2 6.3 0.00021 35.5 9.4 123 136-283 113-238 (287)
105 2qf7_A Pyruvate carboxylase pr 83.1 36 0.0012 36.8 16.9 135 130-282 569-728 (1165)
106 3mcm_A 2-amino-4-hydroxy-6-hyd 83.0 3.4 0.00012 39.6 8.1 93 103-211 193-297 (442)
107 3s5o_A 4-hydroxy-2-oxoglutarat 82.9 16 0.00055 33.0 12.4 76 197-282 39-115 (307)
108 1vrd_A Inosine-5'-monophosphat 82.3 29 0.00099 33.5 14.7 134 134-284 236-370 (494)
109 1ydo_A HMG-COA lyase; TIM-barr 82.3 2.8 9.7E-05 38.2 7.0 126 131-274 154-282 (307)
110 3r2g_A Inosine 5'-monophosphat 82.3 32 0.0011 32.0 16.7 131 134-286 99-231 (361)
111 4djd_D C/Fe-SP, corrinoid/iron 82.1 29 0.00098 31.7 13.6 137 134-274 80-236 (323)
112 3dz1_A Dihydrodipicolinate syn 82.0 20 0.00069 32.5 12.7 98 197-315 33-132 (313)
113 1ka9_F Imidazole glycerol phos 82.0 5.5 0.00019 34.6 8.6 78 133-216 30-107 (252)
114 1m5w_A Pyridoxal phosphate bio 81.7 3.5 0.00012 36.0 6.8 132 134-286 77-218 (243)
115 3no5_A Uncharacterized protein 81.7 6.1 0.00021 35.4 8.8 84 129-213 25-109 (275)
116 1nvm_A HOA, 4-hydroxy-2-oxoval 81.6 7.9 0.00027 35.7 9.9 122 131-274 146-269 (345)
117 2b7n_A Probable nicotinate-nuc 81.5 3.2 0.00011 37.1 7.0 65 138-213 193-257 (273)
118 3gk0_A PNP synthase, pyridoxin 81.3 4.8 0.00016 35.7 7.7 132 134-286 105-246 (278)
119 1ydn_A Hydroxymethylglutaryl-C 81.2 5.8 0.0002 35.7 8.7 125 131-274 152-280 (295)
120 3ovp_A Ribulose-phosphate 3-ep 81.1 4.4 0.00015 35.2 7.5 98 131-252 14-117 (228)
121 3hq1_A 2-isopropylmalate synth 80.5 20 0.00067 36.0 12.8 139 130-278 89-244 (644)
122 1pii_A N-(5'phosphoribosyl)ant 80.5 17 0.00058 34.9 12.0 62 140-213 123-184 (452)
123 1tqx_A D-ribulose-5-phosphate 80.5 12 0.0004 32.5 10.0 88 140-240 130-219 (227)
124 2jbm_A Nicotinate-nucleotide p 80.4 3.2 0.00011 37.7 6.6 65 138-213 208-272 (299)
125 4fo4_A Inosine 5'-monophosphat 80.4 37 0.0013 31.5 15.9 131 137-286 110-243 (366)
126 3chv_A Prokaryotic domain of u 80.3 7.3 0.00025 35.0 8.8 85 129-214 29-114 (284)
127 3qfe_A Putative dihydrodipicol 80.3 19 0.00065 32.8 11.9 76 197-282 36-112 (318)
128 1rqb_A Transcarboxylase 5S sub 79.8 6.5 0.00022 38.7 9.0 78 132-213 173-252 (539)
129 3ffs_A Inosine-5-monophosphate 79.7 37 0.0013 32.0 13.9 130 137-286 146-278 (400)
130 1o4u_A Type II quinolic acid p 79.4 1.9 6.6E-05 38.9 4.7 67 137-214 203-269 (285)
131 3eeg_A 2-isopropylmalate synth 79.2 7.3 0.00025 35.7 8.7 126 131-274 148-277 (325)
132 4gj1_A 1-(5-phosphoribosyl)-5- 79.0 2.1 7.2E-05 37.6 4.8 132 133-283 30-171 (243)
133 3lmz_A Putative sugar isomeras 78.8 13 0.00045 32.1 10.0 76 196-282 33-108 (257)
134 3n9r_A Fructose-bisphosphate a 78.4 39 0.0013 30.6 14.1 171 132-322 26-211 (307)
135 3gk0_A PNP synthase, pyridoxin 78.4 36 0.0012 30.2 13.4 128 136-283 55-183 (278)
136 3gr7_A NADPH dehydrogenase; fl 77.9 11 0.00037 34.8 9.5 79 131-213 226-307 (340)
137 3paj_A Nicotinate-nucleotide p 77.9 8.5 0.00029 35.2 8.5 63 138-214 242-304 (320)
138 4hb7_A Dihydropteroate synthas 77.8 3.1 0.00011 37.2 5.5 136 131-274 27-191 (270)
139 1vli_A Spore coat polysacchari 77.7 28 0.00096 32.6 12.2 109 132-248 42-185 (385)
140 1jvn_A Glutamine, bifunctional 77.4 10 0.00035 37.5 9.7 82 133-218 279-372 (555)
141 3rmj_A 2-isopropylmalate synth 77.2 12 0.00041 35.0 9.6 101 131-240 154-258 (370)
142 1qop_A Tryptophan synthase alp 77.2 38 0.0013 29.8 12.7 82 132-213 29-129 (268)
143 3o6c_A PNP synthase, pyridoxin 77.1 19 0.00064 31.7 10.1 130 134-286 76-238 (260)
144 1ka9_F Imidazole glycerol phos 77.0 29 0.00097 29.9 11.7 98 135-251 153-250 (252)
145 4gj1_A 1-(5-phosphoribosyl)-5- 76.8 26 0.0009 30.4 11.3 91 134-238 151-241 (243)
146 3l0g_A Nicotinate-nucleotide p 76.8 5.1 0.00018 36.3 6.7 64 137-214 217-280 (300)
147 3c6c_A 3-keto-5-aminohexanoate 76.7 15 0.0005 33.6 9.7 86 129-214 43-148 (316)
148 3gnn_A Nicotinate-nucleotide p 76.5 6.7 0.00023 35.5 7.4 63 138-214 220-282 (298)
149 2h9a_B CO dehydrogenase/acetyl 76.1 44 0.0015 30.3 12.8 138 134-274 74-229 (310)
150 1thf_D HISF protein; thermophI 75.9 16 0.00055 31.5 9.8 98 135-251 152-249 (253)
151 1zlp_A PSR132, petal death pro 75.7 24 0.00082 32.2 11.0 86 195-282 48-135 (318)
152 2p0o_A Hypothetical protein DU 75.6 52 0.0018 30.6 14.3 81 132-212 15-98 (372)
153 3tqv_A Nicotinate-nucleotide p 75.6 6.5 0.00022 35.4 7.0 63 138-214 209-271 (287)
154 1gvf_A Tagatose-bisphosphate a 75.5 39 0.0013 30.3 12.1 136 132-282 27-174 (286)
155 1rvg_A Fructose-1,6-bisphospha 75.4 42 0.0014 30.3 12.4 171 132-322 26-209 (305)
156 3bg3_A Pyruvate carboxylase, m 75.4 10 0.00035 38.8 9.1 77 132-212 259-336 (718)
157 2isw_A Putative fructose-1,6-b 75.1 49 0.0017 30.1 13.7 136 132-282 27-172 (323)
158 2e6f_A Dihydroorotate dehydrog 75.0 11 0.00038 34.0 8.6 83 196-283 109-195 (314)
159 1jub_A Dihydroorotate dehydrog 74.5 15 0.00053 32.9 9.5 84 196-284 109-193 (311)
160 1u83_A Phosphosulfolactate syn 74.5 31 0.001 30.7 10.9 124 133-282 52-191 (276)
161 1z41_A YQJM, probable NADH-dep 74.2 12 0.00041 34.4 8.7 78 132-213 227-307 (338)
162 2cc0_A Acetyl-xylan esterase; 73.9 17 0.00059 30.2 9.0 130 139-285 48-185 (195)
163 2ekc_A AQ_1548, tryptophan syn 73.8 46 0.0016 29.1 15.9 19 261-279 132-150 (262)
164 3b0p_A TRNA-dihydrouridine syn 73.8 13 0.00046 34.3 9.0 77 134-213 144-225 (350)
165 2ekc_A AQ_1548, tryptophan syn 73.4 47 0.0016 29.1 15.6 81 132-212 29-128 (262)
166 1i60_A IOLI protein; beta barr 73.4 12 0.00042 32.3 8.3 16 197-212 18-33 (278)
167 1zfj_A Inosine monophosphate d 73.1 67 0.0023 30.7 14.4 130 136-286 234-368 (491)
168 3k13_A 5-methyltetrahydrofolat 73.1 36 0.0012 30.7 11.4 125 131-278 34-171 (300)
169 1m5w_A Pyridoxal phosphate bio 73.0 47 0.0016 28.9 12.0 128 136-283 27-155 (243)
170 1h5y_A HISF; histidine biosynt 72.9 24 0.00081 30.1 10.0 97 135-250 155-251 (253)
171 2ze3_A DFA0005; organic waste 72.5 17 0.00057 32.5 8.9 86 195-282 25-111 (275)
172 1f6y_A 5-methyltetrahydrofolat 71.9 52 0.0018 28.9 13.9 134 131-274 22-185 (262)
173 3q94_A Fructose-bisphosphate a 71.6 56 0.0019 29.2 13.9 136 132-282 30-178 (288)
174 2hmc_A AGR_L_411P, dihydrodipi 71.5 49 0.0017 30.4 12.2 44 229-274 102-147 (344)
175 3p6l_A Sugar phosphate isomera 71.4 23 0.0008 30.4 9.7 118 182-318 9-131 (262)
176 2hjp_A Phosphonopyruvate hydro 71.0 54 0.0019 29.3 12.0 85 195-282 24-109 (290)
177 2nx9_A Oxaloacetate decarboxyl 70.8 22 0.00074 34.3 9.9 78 132-214 156-234 (464)
178 1zco_A 2-dehydro-3-deoxyphosph 70.5 17 0.00057 32.2 8.4 64 252-319 24-91 (262)
179 3nav_A Tryptophan synthase alp 70.0 59 0.002 28.8 12.0 123 136-285 114-239 (271)
180 3khj_A Inosine-5-monophosphate 69.7 70 0.0024 29.5 15.4 130 137-286 107-239 (361)
181 2bmb_A Folic acid synthesis pr 69.6 61 0.0021 31.8 12.8 76 132-211 247-336 (545)
182 3tva_A Xylose isomerase domain 69.5 21 0.00073 31.2 9.1 20 263-282 102-121 (290)
183 3lot_A Uncharacterized protein 69.3 33 0.0011 31.2 10.3 85 129-214 27-116 (314)
184 3e02_A Uncharacterized protein 68.9 22 0.00075 32.3 9.0 85 129-214 27-114 (311)
185 1wa3_A 2-keto-3-deoxy-6-phosph 68.9 48 0.0017 27.4 13.5 112 131-283 19-131 (205)
186 4dpp_A DHDPS 2, dihydrodipicol 68.3 20 0.00069 33.3 8.8 28 254-281 131-159 (360)
187 3e49_A Uncharacterized protein 68.3 28 0.00094 31.7 9.5 86 129-215 27-115 (311)
188 1qop_A Tryptophan synthase alp 68.2 62 0.0021 28.3 13.1 15 229-243 76-90 (268)
189 3f4w_A Putative hexulose 6 pho 68.0 24 0.00083 29.4 8.8 122 132-282 11-133 (211)
190 2wqp_A Polysialic acid capsule 67.5 77 0.0026 29.2 14.7 109 132-248 33-175 (349)
191 4fo4_A Inosine 5'-monophosphat 67.4 79 0.0027 29.3 13.1 97 166-283 81-177 (366)
192 1jvn_A Glutamine, bifunctional 67.0 49 0.0017 32.5 11.8 98 135-251 453-551 (555)
193 1rpx_A Protein (ribulose-phosp 66.8 23 0.00079 30.1 8.5 79 132-215 21-100 (230)
194 1xg4_A Probable methylisocitra 66.1 61 0.0021 29.1 11.3 86 195-282 26-113 (295)
195 3f4w_A Putative hexulose 6 pho 66.0 56 0.0019 27.1 11.2 120 139-286 69-190 (211)
196 3ndo_A Deoxyribose-phosphate a 65.9 66 0.0022 27.8 14.3 153 131-311 26-187 (231)
197 3lye_A Oxaloacetate acetyl hyd 65.2 43 0.0015 30.3 10.1 87 195-282 34-122 (307)
198 1tre_A Triosephosphate isomera 65.1 63 0.0022 28.4 10.9 56 198-265 79-134 (255)
199 3vzx_A Heptaprenylglyceryl pho 65.0 58 0.002 28.1 10.5 72 131-213 137-208 (228)
200 3nl6_A Thiamine biosynthetic b 64.8 86 0.0029 30.7 13.0 136 134-312 25-167 (540)
201 2r91_A 2-keto-3-deoxy-(6-phosp 64.7 13 0.00044 33.2 6.6 76 131-212 16-96 (286)
202 2eja_A URO-D, UPD, uroporphyri 64.5 51 0.0017 29.8 10.8 145 141-315 186-336 (338)
203 2w6r_A Imidazole glycerol phos 64.4 32 0.0011 29.8 9.1 72 136-213 158-229 (266)
204 3l5l_A Xenobiotic reductase A; 64.1 14 0.00048 34.3 6.9 77 133-213 245-325 (363)
205 3vk5_A MOEO5; TIM barrel, tran 64.0 55 0.0019 29.2 10.3 67 137-213 189-256 (286)
206 4eiv_A Deoxyribose-phosphate a 63.7 19 0.00066 32.4 7.3 149 117-282 87-264 (297)
207 3cqj_A L-ribulose-5-phosphate 63.6 46 0.0016 29.1 10.1 82 196-282 33-127 (295)
208 2p10_A MLL9387 protein; putati 63.2 65 0.0022 28.7 10.6 105 167-283 79-190 (286)
209 1f76_A Dihydroorotate dehydrog 63.0 15 0.00052 33.4 6.9 79 133-213 224-318 (336)
210 1oy0_A Ketopantoate hydroxymet 62.5 83 0.0028 28.0 11.3 121 140-282 47-198 (281)
211 1vp8_A Hypothetical protein AF 62.5 47 0.0016 27.9 8.9 94 132-239 27-133 (201)
212 2w6r_A Imidazole glycerol phos 62.3 13 0.00043 32.6 6.0 76 134-215 30-105 (266)
213 3cu2_A Ribulose-5-phosphate 3- 62.2 11 0.00037 32.9 5.3 76 132-216 24-102 (237)
214 3hgj_A Chromate reductase; TIM 61.8 31 0.0011 31.7 8.8 78 132-213 237-318 (349)
215 1fob_A Beta-1,4-galactanase; B 61.5 34 0.0012 31.2 9.0 54 195-256 29-82 (334)
216 3ngj_A Deoxyribose-phosphate a 61.2 17 0.00059 31.7 6.5 132 133-283 94-229 (239)
217 2y88_A Phosphoribosyl isomeras 61.1 13 0.00043 32.1 5.7 73 135-213 150-225 (244)
218 3gr7_A NADPH dehydrogenase; fl 61.0 41 0.0014 30.8 9.4 86 197-283 148-249 (340)
219 3qc0_A Sugar isomerase; TIM ba 61.0 47 0.0016 28.4 9.6 74 196-283 21-103 (275)
220 1aw2_A Triosephosphate isomera 60.9 65 0.0022 28.3 10.2 56 198-265 81-136 (256)
221 3ngf_A AP endonuclease, family 60.8 34 0.0012 29.5 8.6 43 169-212 25-67 (269)
222 2ovl_A Putative racemase; stru 60.5 1E+02 0.0034 28.3 12.2 148 132-320 146-298 (371)
223 1vzw_A Phosphoribosyl isomeras 60.1 12 0.0004 32.3 5.3 90 135-238 147-239 (244)
224 1jcn_A Inosine monophosphate d 60.0 49 0.0017 32.0 10.3 134 135-286 255-390 (514)
225 3b4u_A Dihydrodipicolinate syn 60.0 22 0.00077 31.8 7.3 79 130-212 20-104 (294)
226 1eep_A Inosine 5'-monophosphat 59.8 29 0.00099 32.5 8.4 131 136-284 154-286 (404)
227 1vs1_A 3-deoxy-7-phosphoheptul 59.8 29 0.001 30.9 7.9 64 252-319 39-106 (276)
228 2nuw_A 2-keto-3-deoxygluconate 59.6 14 0.00047 33.2 5.7 77 130-212 16-97 (288)
229 3q45_A Mandelate racemase/muco 59.3 1.1E+02 0.0037 28.1 12.6 147 132-320 140-291 (368)
230 3b0p_A TRNA-dihydrouridine syn 59.2 59 0.002 29.8 10.2 86 197-283 74-164 (350)
231 1vr6_A Phospho-2-dehydro-3-deo 59.2 42 0.0014 31.0 9.0 65 251-319 106-174 (350)
232 1w3i_A EDA, 2-keto-3-deoxy glu 59.2 14 0.00047 33.2 5.7 77 130-212 16-97 (293)
233 1z41_A YQJM, probable NADH-dep 58.9 37 0.0013 30.9 8.8 86 197-283 148-249 (338)
234 1h1y_A D-ribulose-5-phosphate 58.6 41 0.0014 28.6 8.5 66 141-213 130-201 (228)
235 3o6c_A PNP synthase, pyridoxin 58.4 96 0.0033 27.2 11.3 124 137-283 28-152 (260)
236 3dz1_A Dihydrodipicolinate syn 58.4 40 0.0014 30.4 8.8 79 130-212 25-108 (313)
237 3cpr_A Dihydrodipicolinate syn 58.2 23 0.00079 31.9 7.1 79 130-212 33-117 (304)
238 3vav_A 3-methyl-2-oxobutanoate 58.2 1E+02 0.0034 27.4 12.8 86 195-282 38-125 (275)
239 1gte_A Dihydropyrimidine dehyd 58.1 1.7E+02 0.0058 31.0 14.8 170 133-317 647-844 (1025)
240 3flu_A DHDPS, dihydrodipicolin 57.9 15 0.0005 33.1 5.7 79 130-212 24-108 (297)
241 1s2w_A Phosphoenolpyruvate pho 57.5 94 0.0032 27.8 10.9 85 195-282 28-113 (295)
242 2j27_A Triosephosphate isomera 57.2 55 0.0019 28.6 9.0 56 198-265 79-134 (250)
243 3ivs_A Homocitrate synthase, m 57.0 53 0.0018 31.2 9.6 80 132-216 178-258 (423)
244 2yw3_A 4-hydroxy-2-oxoglutarat 57.0 86 0.003 26.3 13.3 108 132-282 23-130 (207)
245 3ngj_A Deoxyribose-phosphate a 57.0 97 0.0033 26.9 18.3 152 131-311 40-197 (239)
246 3m9y_A Triosephosphate isomera 56.8 1E+02 0.0035 27.0 11.7 88 167-266 45-138 (254)
247 2f6u_A GGGPS, (S)-3-O-geranylg 56.5 53 0.0018 28.4 8.8 124 184-321 11-171 (234)
248 2i5g_A Amidohydrolase; NYSGXRC 56.2 39 0.0013 30.8 8.3 132 138-284 103-248 (325)
249 3ih1_A Methylisocitrate lyase; 56.1 1.2E+02 0.0039 27.4 12.8 141 140-282 42-194 (305)
250 3kts_A Glycerol uptake operon 56.0 89 0.003 26.1 12.0 109 141-283 23-134 (192)
251 3iwp_A Copper homeostasis prot 55.8 20 0.00067 32.2 6.0 71 136-214 168-239 (287)
252 3na8_A Putative dihydrodipicol 55.8 14 0.00047 33.6 5.1 79 130-212 41-125 (315)
253 3fkr_A L-2-keto-3-deoxyarabona 55.7 17 0.00058 32.9 5.7 79 130-212 25-109 (309)
254 3s5o_A 4-hydroxy-2-oxoglutarat 55.6 27 0.00093 31.5 7.1 79 130-212 31-115 (307)
255 3l21_A DHDPS, dihydrodipicolin 55.5 18 0.00063 32.6 5.9 79 130-212 32-116 (304)
256 3zwt_A Dihydroorotate dehydrog 55.5 47 0.0016 30.8 8.8 79 133-213 233-327 (367)
257 3b40_A PVDM, probable dipeptid 55.4 93 0.0032 29.4 11.0 55 261-318 334-389 (417)
258 3u0h_A Xylose isomerase domain 55.4 28 0.00095 30.0 7.0 77 196-282 19-103 (281)
259 3o63_A Probable thiamine-phosp 55.3 1E+02 0.0035 26.6 13.0 117 135-291 44-169 (243)
260 1itu_A Renal dipeptidase; glyc 55.2 54 0.0019 30.5 9.2 160 138-318 135-319 (369)
261 1qap_A Quinolinic acid phospho 55.1 36 0.0012 30.6 7.7 63 138-214 219-281 (296)
262 3l5l_A Xenobiotic reductase A; 55.1 24 0.00082 32.7 6.8 87 197-283 162-266 (363)
263 1qo2_A Molecule: N-((5-phospho 55.0 2.8 9.7E-05 36.4 0.3 74 133-214 29-103 (241)
264 2ztj_A Homocitrate synthase; ( 55.0 54 0.0019 30.5 9.3 79 131-214 142-222 (382)
265 2yxb_A Coenzyme B12-dependent 54.9 81 0.0028 25.3 10.6 66 139-212 61-127 (161)
266 3vnd_A TSA, tryptophan synthas 54.9 1.1E+02 0.0038 26.9 13.9 81 132-212 30-129 (267)
267 1tqx_A D-ribulose-5-phosphate 54.7 1E+02 0.0035 26.4 10.4 129 131-288 15-149 (227)
268 1mdl_A Mandelate racemase; iso 54.4 1.3E+02 0.0043 27.4 11.9 148 132-320 144-296 (359)
269 1xky_A Dihydrodipicolinate syn 54.1 16 0.00054 33.0 5.2 79 130-212 29-113 (301)
270 3daq_A DHDPS, dihydrodipicolin 53.9 15 0.0005 33.0 5.0 79 130-212 19-103 (292)
271 1q7z_A 5-methyltetrahydrofolat 53.9 1.7E+02 0.0058 28.7 14.8 136 132-277 338-500 (566)
272 1jub_A Dihydroorotate dehydrog 53.6 37 0.0013 30.4 7.7 80 132-213 170-271 (311)
273 3qze_A DHDPS, dihydrodipicolin 53.5 13 0.00046 33.7 4.6 79 130-212 40-124 (314)
274 3si9_A DHDPS, dihydrodipicolin 53.2 14 0.00049 33.6 4.8 79 130-212 39-123 (315)
275 3oa3_A Aldolase; structural ge 53.2 1.1E+02 0.0036 27.4 10.3 77 131-212 185-262 (288)
276 3a5f_A Dihydrodipicolinate syn 53.0 16 0.00056 32.6 5.1 78 131-212 19-102 (291)
277 3nvt_A 3-deoxy-D-arabino-heptu 52.9 1.5E+02 0.005 27.7 14.5 125 132-282 154-282 (385)
278 3hgj_A Chromate reductase; TIM 52.8 89 0.0031 28.5 10.3 87 197-283 156-259 (349)
279 2dh2_A 4F2 cell-surface antige 52.6 24 0.00083 33.3 6.5 52 229-282 79-141 (424)
280 3m5v_A DHDPS, dihydrodipicolin 52.6 40 0.0014 30.2 7.7 78 131-212 25-109 (301)
281 1h7n_A 5-aminolaevulinic acid 52.5 35 0.0012 31.1 7.0 60 126-185 61-128 (342)
282 1vhn_A Putative flavin oxidore 52.5 12 0.00041 34.0 4.2 72 135-213 141-213 (318)
283 3ozy_A Putative mandelate race 52.4 1.5E+02 0.005 27.5 14.8 147 131-319 150-302 (389)
284 2i9e_A Triosephosphate isomera 52.4 1.2E+02 0.0042 26.6 12.1 56 198-265 78-133 (259)
285 3c2e_A Nicotinate-nucleotide p 52.0 8.1 0.00028 34.9 2.9 64 140-214 212-278 (294)
286 1tv5_A Dhodehase, dihydroorota 51.9 36 0.0012 32.5 7.5 80 132-213 309-402 (443)
287 2yxg_A DHDPS, dihydrodipicolin 51.7 23 0.00077 31.7 5.8 78 131-212 18-101 (289)
288 1ny1_A Probable polysaccharide 51.6 31 0.0011 29.7 6.6 85 190-285 142-229 (240)
289 1ub3_A Aldolase protein; schif 51.4 1.1E+02 0.0039 26.0 12.7 131 131-283 16-153 (220)
290 4g1k_A Triosephosphate isomera 51.1 44 0.0015 29.7 7.5 57 198-266 104-160 (272)
291 2jgq_A Triosephosphate isomera 51.0 56 0.0019 28.3 7.9 101 198-313 73-183 (233)
292 3qfe_A Putative dihydrodipicol 51.0 16 0.00053 33.3 4.7 79 130-212 28-112 (318)
293 3ovp_A Ribulose-phosphate 3-ep 50.8 80 0.0027 27.0 9.0 62 148-213 135-197 (228)
294 3tak_A DHDPS, dihydrodipicolin 50.8 15 0.0005 33.0 4.4 79 130-212 18-102 (291)
295 2ehh_A DHDPS, dihydrodipicolin 50.7 25 0.00086 31.4 6.0 78 131-212 18-101 (294)
296 2r8w_A AGR_C_1641P; APC7498, d 50.7 22 0.00077 32.5 5.7 79 130-212 51-135 (332)
297 3kxq_A Triosephosphate isomera 50.7 47 0.0016 29.5 7.6 57 198-266 104-160 (275)
298 3dx5_A Uncharacterized protein 50.6 47 0.0016 28.8 7.7 79 196-282 18-103 (286)
299 2wkj_A N-acetylneuraminate lya 50.6 24 0.00081 31.8 5.8 79 130-212 28-112 (303)
300 4hjf_A Ggdef family protein; s 50.5 99 0.0034 28.0 10.2 58 233-310 269-327 (340)
301 1twd_A Copper homeostasis prot 50.5 30 0.001 30.5 6.2 69 136-213 130-198 (256)
302 1w5q_A Delta-aminolevulinic ac 50.4 24 0.00082 32.1 5.6 60 126-185 58-124 (337)
303 1x1o_A Nicotinate-nucleotide p 50.4 44 0.0015 29.9 7.4 63 137-213 206-268 (286)
304 1o5k_A DHDPS, dihydrodipicolin 50.3 18 0.00063 32.6 5.0 78 131-212 30-113 (306)
305 3ly0_A Dipeptidase AC. metallo 50.1 75 0.0026 29.4 9.2 159 139-318 150-336 (364)
306 1o5x_A TIM, triosephosphate is 50.0 48 0.0016 29.0 7.4 56 198-265 79-134 (248)
307 3ta6_A Triosephosphate isomera 49.9 53 0.0018 29.1 7.8 87 168-266 49-140 (267)
308 1yxy_A Putative N-acetylmannos 49.8 78 0.0027 26.7 8.9 122 137-284 91-216 (234)
309 2v9d_A YAGE; dihydrodipicolini 49.7 20 0.00068 33.0 5.2 79 130-212 48-132 (343)
310 2j13_A Polysaccharide deacetyl 49.6 26 0.00088 30.5 5.7 85 190-285 154-241 (247)
311 3vni_A Xylose isomerase domain 49.6 64 0.0022 28.0 8.5 76 196-282 20-107 (294)
312 1j93_A UROD, uroporphyrinogen 49.4 1.4E+02 0.0047 27.0 11.0 146 140-316 199-353 (353)
313 3obk_A Delta-aminolevulinic ac 49.4 28 0.00095 31.9 5.9 79 103-185 46-131 (356)
314 2vxn_A Triosephosphate isomera 49.3 50 0.0017 29.0 7.4 56 198-265 80-135 (251)
315 1r2r_A TIM, triosephosphate is 49.3 56 0.0019 28.5 7.8 57 198-266 79-135 (248)
316 2yc6_A Triosephosphate isomera 49.2 56 0.0019 28.7 7.8 56 198-265 80-135 (257)
317 2qf7_A Pyruvate carboxylase pr 49.2 67 0.0023 34.7 9.9 75 132-212 707-783 (1165)
318 1b9b_A TIM, protein (triosepho 49.1 54 0.0018 28.8 7.6 57 198-266 80-136 (255)
319 4f3h_A Fimxeal, putative uncha 49.0 68 0.0023 27.4 8.4 105 167-290 143-248 (250)
320 3jva_A Dipeptide epimerase; en 48.9 1.2E+02 0.0042 27.5 10.6 147 132-320 139-290 (354)
321 2e6f_A Dihydroorotate dehydrog 48.9 43 0.0015 29.9 7.3 80 132-213 172-273 (314)
322 1yya_A Triosephosphate isomera 48.9 58 0.002 28.5 7.8 112 132-266 15-134 (250)
323 3krs_A Triosephosphate isomera 48.7 57 0.002 28.9 7.8 57 198-266 102-158 (271)
324 2a4a_A Deoxyribose-phosphate a 48.6 1.1E+02 0.0039 27.1 9.8 147 117-281 93-257 (281)
325 3bdk_A D-mannonate dehydratase 48.4 15 0.00052 34.5 4.2 83 195-286 32-126 (386)
326 2rfg_A Dihydrodipicolinate syn 48.4 17 0.00059 32.7 4.5 78 131-212 18-101 (297)
327 1ney_A TIM, triosephosphate is 48.3 60 0.002 28.4 7.8 56 198-265 78-133 (247)
328 2iw0_A Chitin deacetylase; hyd 48.2 42 0.0014 29.2 6.9 140 138-286 89-238 (254)
329 3s83_A Ggdef family protein; s 48.2 1.2E+02 0.0042 25.8 10.0 98 166-282 138-236 (259)
330 3l0g_A Nicotinate-nucleotide p 48.2 88 0.003 28.2 9.0 86 169-283 194-279 (300)
331 1vpx_A Protein (transaldolase 48.1 41 0.0014 29.1 6.6 118 137-283 22-141 (230)
332 3qst_A Triosephosphate isomera 47.9 54 0.0019 28.8 7.5 111 131-265 18-136 (255)
333 1pv8_A Delta-aminolevulinic ac 47.8 41 0.0014 30.6 6.7 60 125-185 50-117 (330)
334 1mo0_A TIM, triosephosphate is 47.8 60 0.0021 28.8 7.8 57 198-266 98-154 (275)
335 4e4u_A Mandalate racemase/muco 47.7 1.6E+02 0.0054 27.5 11.4 154 131-319 143-307 (412)
336 2qiw_A PEP phosphonomutase; st 47.7 1E+02 0.0035 26.9 9.3 83 195-282 29-112 (255)
337 3nvt_A 3-deoxy-D-arabino-heptu 47.7 71 0.0024 29.8 8.7 63 253-319 144-210 (385)
338 1f6k_A N-acetylneuraminate lya 47.6 30 0.001 30.9 5.9 79 130-212 20-105 (293)
339 3vav_A 3-methyl-2-oxobutanoate 47.6 1.5E+02 0.0051 26.2 13.9 15 166-180 74-88 (275)
340 4e5t_A Mandelate racemase / mu 47.3 1.4E+02 0.0049 27.7 11.0 154 131-319 150-314 (404)
341 3oa3_A Aldolase; structural ge 47.3 1.6E+02 0.0053 26.3 18.7 153 131-312 71-229 (288)
342 4dpp_A DHDPS 2, dihydrodipicol 46.9 31 0.0011 32.0 6.0 79 130-212 76-160 (360)
343 1y0e_A Putative N-acetylmannos 46.6 88 0.003 26.1 8.6 125 139-284 80-205 (223)
344 1n7k_A Deoxyribose-phosphate a 46.6 1.4E+02 0.0048 25.7 13.2 128 131-283 33-168 (234)
345 3neh_A Renal dipeptidase famil 46.4 1.7E+02 0.0057 26.5 11.0 161 138-317 117-292 (318)
346 2g0w_A LMO2234 protein; putati 46.3 1.5E+02 0.005 25.8 10.6 15 197-211 72-86 (296)
347 1viz_A PCRB protein homolog; s 46.3 1.4E+02 0.0049 25.7 10.2 70 133-213 141-210 (240)
348 4aie_A Glucan 1,6-alpha-glucos 46.2 43 0.0015 32.2 7.4 84 197-282 36-199 (549)
349 3th6_A Triosephosphate isomera 46.2 63 0.0022 28.2 7.6 56 198-265 79-134 (249)
350 1y0e_A Putative N-acetylmannos 46.0 1.3E+02 0.0044 25.0 9.7 71 140-213 132-204 (223)
351 2gou_A Oxidoreductase, FMN-bin 45.9 84 0.0029 28.9 9.0 73 133-213 249-322 (365)
352 3sr7_A Isopentenyl-diphosphate 45.8 66 0.0022 29.8 8.1 79 196-283 158-237 (365)
353 4dwd_A Mandelate racemase/muco 45.8 1.9E+02 0.0064 26.8 13.1 153 132-320 139-297 (393)
354 1m3u_A 3-methyl-2-oxobutanoate 45.7 1.6E+02 0.0054 25.9 10.9 124 140-282 30-180 (264)
355 3hbl_A Pyruvate carboxylase; T 45.3 1.2E+02 0.0042 32.6 11.1 78 131-213 689-767 (1150)
356 3fa4_A 2,3-dimethylmalate lyas 45.2 1.7E+02 0.0059 26.2 15.5 115 195-310 27-144 (302)
357 3i65_A Dihydroorotate dehydrog 44.8 65 0.0022 30.5 8.0 79 133-213 282-374 (415)
358 1ep3_A Dihydroorotate dehydrog 44.5 26 0.00087 31.3 5.0 81 197-283 115-196 (311)
359 1k77_A EC1530, hypothetical pr 44.5 69 0.0024 27.1 7.8 42 170-212 18-59 (260)
360 1ps9_A 2,4-dienoyl-COA reducta 44.5 48 0.0016 33.2 7.6 87 197-283 145-248 (671)
361 3sjn_A Mandelate racemase/muco 44.3 1.9E+02 0.0065 26.5 12.0 150 132-320 146-301 (374)
362 1yxy_A Putative N-acetylmannos 44.3 41 0.0014 28.6 6.1 68 140-213 146-215 (234)
363 1r3s_A URO-D, uroporphyrinogen 44.2 1.5E+02 0.0052 27.0 10.5 68 142-212 205-282 (367)
364 2p10_A MLL9387 protein; putati 44.2 1.3E+02 0.0046 26.7 9.4 94 166-271 149-249 (286)
365 3l5a_A NADH/flavin oxidoreduct 44.1 30 0.001 32.8 5.6 79 132-213 262-346 (419)
366 3eb2_A Putative dihydrodipicol 44.1 19 0.00064 32.5 4.0 80 130-212 21-105 (300)
367 1rd5_A Tryptophan synthase alp 43.9 1.1E+02 0.0038 26.4 9.0 121 132-271 30-165 (262)
368 1m6j_A TIM, TPI, triosephospha 43.8 59 0.002 28.7 7.1 57 198-266 86-142 (261)
369 1tz9_A Mannonate dehydratase; 43.6 68 0.0023 29.3 8.0 81 195-286 23-117 (367)
370 2v5b_A Triosephosphate isomera 43.6 1.6E+02 0.0056 25.5 15.5 58 196-265 71-128 (244)
371 3qja_A IGPS, indole-3-glycerol 43.5 51 0.0017 29.2 6.7 67 140-213 175-242 (272)
372 3toy_A Mandelate racemase/muco 43.2 2E+02 0.0069 26.5 13.2 149 131-320 166-320 (383)
373 3r8r_A Transaldolase; pentose 43.1 49 0.0017 28.2 6.3 75 143-220 119-193 (212)
374 3otr_A Enolase; structural gen 42.8 2.3E+02 0.0078 27.0 11.9 123 131-283 281-408 (452)
375 3o0f_A Putative metal-dependen 42.4 87 0.003 28.1 8.2 100 196-309 186-286 (301)
376 2f6u_A GGGPS, (S)-3-O-geranylg 42.3 1.7E+02 0.0056 25.2 10.3 72 132-214 147-219 (234)
377 1hjs_A Beta-1,4-galactanase; 4 42.3 1.9E+02 0.0066 26.0 14.0 136 141-283 34-212 (332)
378 3paj_A Nicotinate-nucleotide p 42.2 1.4E+02 0.0049 27.0 9.6 86 169-283 218-303 (320)
379 2l69_A Rossmann 2X3 fold prote 42.2 98 0.0034 22.6 6.9 49 229-282 33-81 (134)
380 4ef8_A Dihydroorotate dehydrog 41.9 71 0.0024 29.4 7.7 113 163-283 108-228 (354)
381 3jr2_A Hexulose-6-phosphate sy 41.9 1.5E+02 0.0052 24.7 10.0 147 132-311 17-163 (218)
382 1yx1_A Hypothetical protein PA 41.8 58 0.002 27.9 6.8 20 263-282 84-103 (264)
383 2btm_A TIM, protein (triosepho 41.7 63 0.0021 28.3 6.9 57 198-266 78-134 (252)
384 3l9w_A Glutathione-regulated p 41.6 1.6E+02 0.0056 27.4 10.4 84 147-242 68-153 (413)
385 1vli_A Spore coat polysacchari 41.6 57 0.002 30.5 6.9 61 259-320 40-119 (385)
386 3rr1_A GALD, putative D-galact 41.6 99 0.0034 28.9 8.8 78 132-210 125-209 (405)
387 3tha_A Tryptophan synthase alp 41.4 80 0.0028 27.6 7.6 112 136-268 105-217 (252)
388 3inp_A D-ribulose-phosphate 3- 41.4 1.7E+02 0.006 25.2 10.1 82 147-241 156-242 (246)
389 2ojp_A DHDPS, dihydrodipicolin 41.2 17 0.00058 32.6 3.2 79 130-212 18-102 (292)
390 4exq_A UPD, URO-D, uroporphyri 41.2 1.5E+02 0.0052 27.1 10.0 67 143-212 206-279 (368)
391 3tdn_A FLR symmetric alpha-bet 41.1 5.7 0.00019 34.6 0.0 73 135-213 157-229 (247)
392 1x7f_A Outer surface protein; 41.0 1.3E+02 0.0043 28.2 9.2 144 133-282 40-203 (385)
393 1s2w_A Phosphoenolpyruvate pho 40.9 1.6E+02 0.0053 26.3 9.6 74 133-217 169-242 (295)
394 3q58_A N-acetylmannosamine-6-p 40.8 1.1E+02 0.0037 26.1 8.3 120 139-286 93-213 (229)
395 2r14_A Morphinone reductase; H 40.7 88 0.003 29.0 8.2 25 259-283 251-275 (377)
396 3s1x_A Probable transaldolase; 40.6 65 0.0022 27.7 6.7 75 143-220 121-195 (223)
397 3h5d_A DHDPS, dihydrodipicolin 40.6 48 0.0016 29.9 6.2 79 130-212 24-109 (311)
398 3q58_A N-acetylmannosamine-6-p 40.6 1.1E+02 0.0037 26.2 8.2 69 138-213 140-210 (229)
399 3gka_A N-ethylmaleimide reduct 40.3 78 0.0027 29.2 7.7 87 197-283 165-270 (361)
400 2gou_A Oxidoreductase, FMN-bin 40.3 41 0.0014 31.1 5.8 25 259-283 246-270 (365)
401 3rcy_A Mandelate racemase/muco 40.3 1.1E+02 0.0039 28.8 9.1 80 131-211 145-235 (433)
402 3ijd_A Uncharacterized protein 40.2 1.2E+02 0.004 27.5 8.7 115 131-265 101-227 (315)
403 3igs_A N-acetylmannosamine-6-p 40.1 1.2E+02 0.004 25.9 8.4 68 138-213 140-210 (232)
404 1vyr_A Pentaerythritol tetrani 40.0 1.2E+02 0.0041 27.9 9.0 73 133-213 250-323 (364)
405 3gnh_A L-lysine, L-arginine ca 40.0 2.1E+02 0.0071 25.7 12.8 77 132-214 165-248 (403)
406 3b8i_A PA4872 oxaloacetate dec 39.5 2E+02 0.007 25.5 13.5 112 195-310 30-145 (287)
407 3kru_A NADH:flavin oxidoreduct 39.3 69 0.0024 29.3 7.1 79 132-214 228-308 (343)
408 2bdq_A Copper homeostasis prot 39.3 69 0.0024 27.5 6.6 72 135-212 134-206 (224)
409 3g8r_A Probable spore coat pol 39.0 2.3E+02 0.0079 26.0 15.1 108 132-247 19-161 (350)
410 2vc6_A MOSA, dihydrodipicolina 38.8 28 0.00094 31.2 4.2 78 131-212 18-101 (292)
411 3l5a_A NADH/flavin oxidoreduct 38.8 27 0.00092 33.1 4.3 25 259-283 260-285 (419)
412 1ccw_A Protein (glutamate muta 38.6 72 0.0025 24.7 6.3 67 140-211 47-117 (137)
413 2rag_A Dipeptidase; aminohydro 38.6 1.7E+02 0.0058 27.5 9.9 55 261-318 335-390 (417)
414 2q02_A Putative cytoplasmic pr 38.5 74 0.0025 27.1 7.0 15 197-211 55-69 (272)
415 3id7_A Dipeptidase; streptomyc 38.4 1.3E+02 0.0044 28.2 8.9 54 260-318 294-351 (400)
416 2hmc_A AGR_L_411P, dihydrodipi 38.4 25 0.00085 32.4 3.9 77 130-212 43-124 (344)
417 2v82_A 2-dehydro-3-deoxy-6-pho 38.0 1.7E+02 0.0058 24.1 13.9 70 131-212 16-86 (212)
418 3igs_A N-acetylmannosamine-6-p 38.0 1.6E+02 0.0054 25.1 8.9 120 139-286 93-213 (232)
419 2agk_A 1-(5-phosphoribosyl)-5- 37.9 39 0.0013 29.7 5.0 91 138-239 162-257 (260)
420 3eul_A Possible nitrate/nitrit 37.9 1.3E+02 0.0044 22.7 8.9 59 169-243 76-134 (152)
421 2fli_A Ribulose-phosphate 3-ep 37.6 87 0.003 26.0 7.1 76 131-215 13-93 (220)
422 1eye_A DHPS 1, dihydropteroate 37.5 2.2E+02 0.0074 25.2 10.4 28 253-282 102-130 (280)
423 2xwp_A Sirohydrochlorin cobalt 37.5 2E+02 0.0069 24.8 11.3 138 137-286 63-201 (264)
424 1x7f_A Outer surface protein; 37.5 26 0.00089 32.8 3.9 74 197-282 45-122 (385)
425 3hdg_A Uncharacterized protein 37.1 1.2E+02 0.0042 22.2 8.2 59 169-243 66-124 (137)
426 2pcq_A Putative dihydrodipicol 37.0 73 0.0025 28.2 6.8 44 229-274 72-117 (283)
427 1o66_A 3-methyl-2-oxobutanoate 36.9 2.2E+02 0.0076 25.1 12.8 86 195-282 26-114 (275)
428 1o66_A 3-methyl-2-oxobutanoate 36.7 2.2E+02 0.0076 25.1 14.0 16 231-248 160-175 (275)
429 1jw9_B Molybdopterin biosynthe 36.7 2E+02 0.0068 24.6 10.8 73 138-213 45-128 (249)
430 1gte_A Dihydropyrimidine dehyd 36.7 2.1E+02 0.0071 30.3 11.3 114 164-283 616-735 (1025)
431 2r14_A Morphinone reductase; H 36.5 1.2E+02 0.004 28.1 8.4 74 133-213 254-328 (377)
432 4djd_C C/Fe-SP, corrinoid/iron 36.5 2.2E+02 0.0074 27.1 10.1 38 167-209 141-178 (446)
433 1l6s_A Porphobilinogen synthas 36.2 67 0.0023 29.0 6.2 58 126-185 50-114 (323)
434 1ep3_A Dihydroorotate dehydrog 36.2 68 0.0023 28.4 6.5 76 135-213 177-270 (311)
435 3d0c_A Dihydrodipicolinate syn 36.1 71 0.0024 28.8 6.6 78 130-212 29-112 (314)
436 3tqv_A Nicotinate-nucleotide p 35.9 1.9E+02 0.0066 25.7 9.2 86 169-283 185-270 (287)
437 1yad_A Regulatory protein TENI 35.7 97 0.0033 25.9 7.1 70 140-213 123-192 (221)
438 2dqw_A Dihydropteroate synthas 35.6 2.4E+02 0.0082 25.1 10.9 27 253-282 125-152 (294)
439 4i6k_A Amidohydrolase family p 35.5 2.2E+02 0.0076 24.7 14.3 119 135-277 54-174 (294)
440 1ea9_C Cyclomaltodextrinase; h 35.5 65 0.0022 31.7 6.7 60 259-319 168-236 (583)
441 1qtw_A Endonuclease IV; DNA re 35.4 1.2E+02 0.004 26.0 7.9 17 231-249 88-104 (285)
442 3i4e_A Isocitrate lyase; struc 35.4 2.9E+02 0.01 26.1 10.8 78 133-217 270-356 (439)
443 1vyr_A Pentaerythritol tetrani 35.4 98 0.0033 28.5 7.6 25 259-283 247-271 (364)
444 3tsm_A IGPS, indole-3-glycerol 35.4 1.2E+02 0.004 26.8 7.7 68 139-213 181-249 (272)
445 1mzh_A Deoxyribose-phosphate a 35.3 1.9E+02 0.0067 24.3 9.1 76 131-213 129-204 (225)
446 1lwj_A 4-alpha-glucanotransfer 35.1 39 0.0013 31.9 4.9 37 229-267 67-104 (441)
447 1p0k_A Isopentenyl-diphosphate 34.9 2.5E+02 0.0087 25.2 11.8 133 138-283 77-209 (349)
448 1lt8_A Betaine-homocysteine me 34.6 1.8E+02 0.0062 27.2 9.3 37 228-274 195-233 (406)
449 3o63_A Probable thiamine-phosp 34.4 49 0.0017 28.7 5.1 67 140-213 148-219 (243)
450 3l23_A Sugar phosphate isomera 34.4 60 0.0021 28.7 5.8 76 196-282 32-127 (303)
451 3gka_A N-ethylmaleimide reduct 34.4 67 0.0023 29.7 6.2 66 134-213 250-316 (361)
452 2z1k_A (NEO)pullulanase; hydro 34.3 63 0.0022 30.6 6.3 39 229-269 94-133 (475)
453 3civ_A Endo-beta-1,4-mannanase 34.1 2.1E+02 0.0073 25.9 9.6 58 197-256 57-119 (343)
454 3kru_A NADH:flavin oxidoreduct 34.1 1.8E+02 0.0061 26.5 9.1 86 197-283 147-249 (343)
455 4dye_A Isomerase; enolase fami 34.0 1.7E+02 0.0058 27.2 9.1 71 132-210 168-243 (398)
456 3t7v_A Methylornithine synthas 33.7 2.6E+02 0.0089 25.0 12.8 166 139-319 154-339 (350)
457 4ab4_A Xenobiotic reductase B; 33.7 71 0.0024 29.5 6.3 66 134-213 242-308 (362)
458 2qul_A D-tagatose 3-epimerase; 33.7 2.2E+02 0.0076 24.2 10.0 76 196-282 20-107 (290)
459 1hjs_A Beta-1,4-galactanase; 4 33.5 50 0.0017 30.0 5.2 53 196-256 30-82 (332)
460 1nu5_A Chloromuconate cycloiso 33.3 2.7E+02 0.0094 25.1 11.9 148 132-320 142-295 (370)
461 1g94_A Alpha-amylase; beta-alp 33.3 50 0.0017 31.2 5.3 63 196-261 18-93 (448)
462 3stp_A Galactonate dehydratase 33.1 89 0.0031 29.3 7.0 76 132-210 179-261 (412)
463 3mz2_A Glycerophosphoryl diest 32.9 1.9E+02 0.0064 25.6 8.8 46 235-282 218-265 (292)
464 3fa4_A 2,3-dimethylmalate lyas 32.8 2.7E+02 0.0092 24.9 14.9 140 140-282 31-189 (302)
465 1ps9_A 2,4-dienoyl-COA reducta 32.8 1E+02 0.0035 30.7 7.8 79 132-213 226-310 (671)
466 1kbi_A Cytochrome B2, L-LCR; f 32.7 1.5E+02 0.005 28.8 8.6 74 138-213 355-432 (511)
467 2r6o_A Putative diguanylate cy 32.7 1.4E+02 0.0049 26.3 8.0 40 233-282 220-260 (294)
468 1q7z_A 5-methyltetrahydrofolat 32.7 1.7E+02 0.0059 28.7 9.2 45 228-282 185-231 (566)
469 3pm6_A Putative fructose-bisph 32.6 2.8E+02 0.0094 24.9 11.3 122 147-283 113-251 (306)
470 2q02_A Putative cytoplasmic pr 32.5 2.2E+02 0.0077 23.9 11.6 71 137-212 22-104 (272)
471 3eol_A Isocitrate lyase; seatt 32.4 2.6E+02 0.0089 26.4 9.9 77 133-216 265-350 (433)
472 2y8u_A Chitin deacetylase; hyd 32.4 2.1E+02 0.0073 24.1 8.8 133 138-286 75-221 (230)
473 2nli_A Lactate oxidase; flavoe 32.3 99 0.0034 28.5 7.1 72 138-213 241-313 (368)
474 3r12_A Deoxyribose-phosphate a 32.1 2.6E+02 0.0088 24.5 18.8 152 131-311 56-213 (260)
475 3e96_A Dihydrodipicolinate syn 32.0 81 0.0028 28.4 6.3 78 130-212 29-112 (316)
476 1ht6_A AMY1, alpha-amylase iso 31.9 54 0.0019 30.5 5.3 62 197-261 25-97 (405)
477 1icp_A OPR1, 12-oxophytodienoa 31.8 1.5E+02 0.0051 27.4 8.2 86 197-283 171-276 (376)
478 3hzh_A Chemotaxis response reg 31.8 1.6E+02 0.0053 22.4 7.4 39 170-210 99-137 (157)
479 3m0z_A Putative aldolase; MCSG 31.8 2.5E+02 0.0085 24.2 8.9 68 136-211 147-217 (249)
480 3ajx_A 3-hexulose-6-phosphate 31.5 2.1E+02 0.0072 23.3 11.5 123 131-283 10-134 (207)
481 4a29_A Engineered retro-aldol 31.5 93 0.0032 27.3 6.2 71 137-213 163-233 (258)
482 1qo2_A Molecule: N-((5-phospho 31.5 1.3E+02 0.0045 25.4 7.4 71 136-213 146-223 (241)
483 3r12_A Deoxyribose-phosphate a 31.4 2.7E+02 0.0091 24.4 10.4 75 131-212 170-244 (260)
484 1gcy_A Glucan 1,4-alpha-maltot 31.3 74 0.0025 30.8 6.3 28 229-258 90-117 (527)
485 2wqp_A Polysialic acid capsule 31.2 1.1E+02 0.0037 28.2 7.0 67 253-320 21-109 (349)
486 3pjx_A Cyclic dimeric GMP bind 31.2 1.7E+02 0.0057 27.2 8.6 48 234-291 381-429 (430)
487 1wzl_A Alpha-amylase II; pullu 31.1 61 0.0021 31.9 5.7 61 259-319 169-237 (585)
488 1vrd_A Inosine-5'-monophosphat 31.0 1.5E+02 0.005 28.4 8.3 68 196-283 239-306 (494)
489 1zlp_A PSR132, petal death pro 30.9 3E+02 0.01 24.8 13.3 139 140-282 52-208 (318)
490 2qgy_A Enolase from the enviro 30.8 3.1E+02 0.011 25.1 12.0 151 132-323 149-304 (391)
491 1ypf_A GMP reductase; GUAC, pu 30.8 3E+02 0.01 24.7 10.6 127 137-285 108-241 (336)
492 3lg3_A Isocitrate lyase; conse 30.6 3E+02 0.01 26.0 10.0 77 133-216 270-355 (435)
493 3qvq_A Phosphodiesterase OLEI0 30.6 2.5E+02 0.0086 23.9 9.7 84 170-281 153-236 (252)
494 4dad_A Putative pilus assembly 30.5 1.7E+02 0.0057 21.7 7.4 60 168-243 81-140 (146)
495 1ccw_A Protein (glutamate muta 30.3 1E+02 0.0034 23.9 5.8 71 195-279 43-115 (137)
496 1gox_A (S)-2-hydroxy-acid oxid 30.0 72 0.0025 29.4 5.7 72 138-213 237-309 (370)
497 4gqr_A Pancreatic alpha-amylas 30.0 32 0.0011 32.5 3.3 29 228-258 73-101 (496)
498 4aef_A Neopullulanase (alpha-a 29.9 57 0.0019 32.5 5.3 72 197-270 243-323 (645)
499 2hsa_B 12-oxophytodienoate red 29.9 2.5E+02 0.0085 26.1 9.5 77 133-213 259-348 (402)
500 3r8r_A Transaldolase; pentose 29.9 1.3E+02 0.0046 25.4 6.9 115 168-317 39-158 (212)
No 1
>3t7v_A Methylornithine synthase PYLB; TIM-barrel fold, mutase, [4Fe-4S]-cluster, SAM, lysine, transferase; HET: SAM MD0; 1.50A {Methanosarcina barkeri}
Probab=99.96 E-value=3.2e-29 Score=239.10 Aligned_cols=245 Identities=17% Similarity=0.224 Sum_probs=196.8
Q ss_pred HhhhccCCcch--HHHHHHhcC---CCHHHHHHHccCCCccccccCCCCceeeEEEEeeccCCCCCCcCcccCCCCC--C
Q 018731 56 LRQKAPQGQRF--QEVKESLSS---LKLNTVCEEAQCPNIGECWNGGGDGIATATIMLLGDTCTRGCRFCAVKTSRN--P 128 (351)
Q Consensus 56 i~~~~~~g~~~--~~~~~ll~~---~~l~~l~~~A~~p~i~~~~~~~~~~~~~~~~i~~s~gC~~~C~FC~~~~~~~--~ 128 (351)
|.+++.+|+++ .|+..+++. .+++.|++.|+ .+++.+.| +.+...+++++|++|+++|.||+++..+. .
T Consensus 13 i~~k~~~~~~l~~~e~~~l~~~~~~~~~~~L~~~A~--~~r~~~~g--~~v~~~~~i~~t~~C~~~C~fC~~~~~~~~~~ 88 (350)
T 3t7v_A 13 LGDKVIEGYQLTDNDLRTLLSLESKEGLERLYSAAR--KVRDHYFG--NRVFLNCFIYFSTYCKNQCSFCYYNCRNEINR 88 (350)
T ss_dssp HHHHHHTTCCCCHHHHHHHHTCCSHHHHHHHHHHHH--HHHHHHHT--TEEEEEEEEEEECCCCCCCTTCTTCTTSCCCC
T ss_pred HHHHHHcCCCCCHHHHHHHhcCCChhHHHHHHHHHH--HHHHHHCC--CEEEEEEeeecCCCcCCCCCcCCCcCcCCCCc
Confidence 45677777766 568888875 35788999999 99998887 46777788899999999999999976542 2
Q ss_pred CCCCchhHHHHHHHHHhCCCcEEEEeccCCCCCCCCcHHHHHHHHHHHHHhCCCcEEEEeecCCCCCHHHHHHHHHcCCC
Q 018731 129 APPDPMEPENTAKAIASWGVDYIVLTSVDRDDIPDGGSGHFARTVKAMKKQKPDIMVECLTSDFRGDLRAVETLVHSGLD 208 (351)
Q Consensus 129 ~~~~~eei~~~~~~~~~~G~~~I~ltgg~~~~l~~~~~~~~~~li~~ik~~~p~i~i~~~~~~~~~~~e~l~~L~~aG~~ 208 (351)
..++++++.+.++.+.+.|+++|+|+||+.+.+. .+.+++.++++.+++.+ ++.+++ +++ .++++.++.|+++|++
T Consensus 89 ~~ls~eei~~~~~~~~~~G~~~i~l~gGe~p~~~-~~~~~~~~l~~~ik~~~-~i~i~~-s~g-~~~~e~l~~L~~aG~~ 164 (350)
T 3t7v_A 89 YRLTMEEIKETCKTLKGAGFHMVDLTMGEDPYYY-EDPNRFVELVQIVKEEL-GLPIMI-SPG-LMDNATLLKAREKGAN 164 (350)
T ss_dssp CBCCHHHHHHHHHHHTTSCCSEEEEEECCCHHHH-HSTHHHHHHHHHHHHHH-CSCEEE-ECS-SCCHHHHHHHHHTTEE
T ss_pred eeCCHHHHHHHHHHHHHCCCCEEEEeeCCCCccc-cCHHHHHHHHHHHHhhc-CceEEE-eCC-CCCHHHHHHHHHcCCC
Confidence 2367899999999988999999999999843221 01478899999999765 466654 343 4699999999999999
Q ss_pred eeecchhchHH-HHhhhcCCCCCHHHHHHHHHHHHHhCCCCeEEEeeeeeCCCCHHHHHHHHHHHHhCCCCEEeeeccc-
Q 018731 209 VFAHNIETVKR-LQRIVRDPRAGYEQSLEVLKHAKLSKKGLITKSSIMLGLGESDDDLKEAMADLRSIDVDILTLGQYL- 286 (351)
Q Consensus 209 ~i~~~ies~~~-~~~~~r~~~~~~~~~l~~i~~~~~~~~Gi~v~~~~IvGlgEt~e~~~~~l~~l~~lg~d~i~i~~~l- 286 (351)
++.+++||+++ .++.++ +++++++++++++.+++ .|+.+++++|+|+|||.+++.++++++++++++.+.++.|.
T Consensus 165 ~i~i~lEt~~~~~~~~i~-~~~~~~~~l~~i~~a~~--~Gi~v~~~~i~Glget~e~~~~~l~~l~~l~~~~v~~~~f~p 241 (350)
T 3t7v_A 165 FLALYQETYDTELYRKLR-VGQSFDGRVNARRFAKQ--QGYCVEDGILTGVGNDIESTILSLRGMSTNDPDMVRVMTFLP 241 (350)
T ss_dssp EEECCCBCSCHHHHHHHS-TTCCHHHHHHHHHHHHH--HTCEEEEEEEESSSCCHHHHHHHHHHHHHTCCSEEEEEECCC
T ss_pred EEEEeeecCCHHHHHHhC-CCCCHHHHHHHHHHHHH--cCCeEccceEeecCCCHHHHHHHHHHHHhCCCCEEEecceee
Confidence 99999999855 677776 57899999999999999 99999999999999999999999999999999999997564
Q ss_pred CC-CCCcccccCCCCHHHHHHHHHHHHh
Q 018731 287 QP-TPLHLTVKEYVTPEKFDFWKAYGES 313 (351)
Q Consensus 287 ~P-Tp~~~~~~~~v~~~e~~~~~~~~~~ 313 (351)
.| ||++. ....+++++.++.+.++.
T Consensus 242 ~~gT~l~~--~~~~~~~e~l~~ia~~Rl 267 (350)
T 3t7v_A 242 QEGTPLEG--FRDKSNLSELKIISVLRL 267 (350)
T ss_dssp CTTSTTTT--CCCCCCCCHHHHHHHHHH
T ss_pred CCCCcCcc--CCCCChHHHHHHHHHHHH
Confidence 23 88762 344566666666555554
No 2
>3iix_A Biotin synthetase, putative; adoMet radical, SAM radical, adoMet cleavage, Fe4S4 cluster, HYDE, hydrogenase, maturation, beta barrel; HET: OTY CSO 5AD CPS; 1.25A {Thermotoga maritima} PDB: 3ciw_A* 3iiz_A* 3cix_A*
Probab=99.95 E-value=1.5e-26 Score=220.28 Aligned_cols=233 Identities=24% Similarity=0.321 Sum_probs=191.7
Q ss_pred chHHHHHHhcCCC---HHHHHHHccCCCccccccCCCCceeeEEEEeeccCCCCCCcCcccCCCCCC---CCCCchhHHH
Q 018731 65 RFQEVKESLSSLK---LNTVCEEAQCPNIGECWNGGGDGIATATIMLLGDTCTRGCRFCAVKTSRNP---APPDPMEPEN 138 (351)
Q Consensus 65 ~~~~~~~ll~~~~---l~~l~~~A~~p~i~~~~~~~~~~~~~~~~i~~s~gC~~~C~FC~~~~~~~~---~~~~~eei~~ 138 (351)
...|+..+++..+ ++.|+..|+ .+++.+.| +.+...+++.+|++|+++|.||++....+. ..++++++.+
T Consensus 16 ~~~e~~~ll~~~~~~~~~~l~~~A~--~ir~~~~g--~~v~~~~~i~~t~~C~~~C~fC~~~~~~~~~~~~~ls~eei~~ 91 (348)
T 3iix_A 16 TREVLKEALSINDRGFNEALFKLAD--EIRRKYVG--DEVHIRAIIEFSNVCRKNCLYCGLRRDNKNLKRYRMTPEEIVE 91 (348)
T ss_dssp CHHHHHHHHHCCCHHHHHHHHHHHH--HHHHHHHC--SEEEEEEEEEEECCCSCCCTTCTTCTTCCSSCCCBCCHHHHHH
T ss_pred CHHHHHHHHcCCCHHHHHHHHHHHH--HHHHHHcC--CEEEEEEEeEecCCcCCcCccCCCCCCCCCcCceeCCHHHHHH
Confidence 3467888887654 677899999 89888887 466677788899999999999998775432 2357799999
Q ss_pred HHHHHHhCCCcEEEEeccCCCCCCCCcHHHHHHHHHHHHHhCCCcEEEEeecCCCCCHHHHHHHHHcCCCeeecchhchH
Q 018731 139 TAKAIASWGVDYIVLTSVDRDDIPDGGSGHFARTVKAMKKQKPDIMVECLTSDFRGDLRAVETLVHSGLDVFAHNIETVK 218 (351)
Q Consensus 139 ~~~~~~~~G~~~I~ltgg~~~~l~~~~~~~~~~li~~ik~~~p~i~i~~~~~~~~~~~e~l~~L~~aG~~~i~~~ies~~ 218 (351)
.++.+.+.|++.|+|+||+++.+. .+++.++++.+++. ++.+.+ ++ +.++++.++.|+++|++++.+++|+.+
T Consensus 92 ~i~~~~~~g~~~i~~~gGe~p~~~---~~~~~~li~~i~~~--~~~i~~-s~-g~l~~e~l~~L~~ag~~~v~i~let~~ 164 (348)
T 3iix_A 92 RARLAVQFGAKTIVLQSGEDPYXM---PDVISDIVKEIKKM--GVAVTL-SL-GEWPREYYEKWKEAGADRYLLRHETAN 164 (348)
T ss_dssp HHHHHHHTTCSEEEEEESCCGGGT---THHHHHHHHHHHTT--SCEEEE-EC-CCCCHHHHHHHHHHTCCEEECCCBCSC
T ss_pred HHHHHHHCCCCEEEEEeCCCCCcc---HHHHHHHHHHHHhc--CceEEE-ec-CCCCHHHHHHHHHhCCCEEeeeeeeCC
Confidence 999998999999999999954444 47899999999986 677764 33 346999999999999999999999985
Q ss_pred H-HHhhhcCCCCCHHHHHHHHHHHHHhCCCCeEEEeeeeeC-CCCHHHHHHHHHHHHhCCCCEEeeeccc-CC-CCCccc
Q 018731 219 R-LQRIVRDPRAGYEQSLEVLKHAKLSKKGLITKSSIMLGL-GESDDDLKEAMADLRSIDVDILTLGQYL-QP-TPLHLT 294 (351)
Q Consensus 219 ~-~~~~~r~~~~~~~~~l~~i~~~~~~~~Gi~v~~~~IvGl-gEt~e~~~~~l~~l~~lg~d~i~i~~~l-~P-Tp~~~~ 294 (351)
+ .++.++ +.+++++++++++.+++ .|+.+.+++|+|+ |||.+++.++++++++++++.+.+++|. .| ||++.
T Consensus 165 ~~~~~~i~-~~~~~~~~~~~i~~~~~--~Gi~v~~~~i~G~p~et~e~~~~~~~~l~~l~~~~i~i~~~~p~~gt~l~~- 240 (348)
T 3iix_A 165 PVLHRKLR-PDTSFENRLNCLLTLKE--LGYETGAGSMVGLPGQTIDDLVDDLLFLKEHDFDMVGIGPFIPHPDTPLAN- 240 (348)
T ss_dssp HHHHHHHS-TTSCHHHHHHHHHHHHH--TTCEEEECBEESCTTCCHHHHHHHHHHHHHHTCSEECCEECCCCTTSTTTT-
T ss_pred HHHHHHhC-CCcCHHHHHHHHHHHHH--hCCeeccceEEeCCCCCHHHHHHHHHHHHhcCCCEEeeeeeecCCCCCccc-
Confidence 4 677776 56799999999999999 9999999999999 9999999999999999999999997554 22 77762
Q ss_pred ccCCCCHHHHHHHHHHHHh
Q 018731 295 VKEYVTPEKFDFWKAYGES 313 (351)
Q Consensus 295 ~~~~v~~~e~~~~~~~~~~ 313 (351)
....+++++.++.+.++.
T Consensus 241 -~~~~~~~e~~~~~a~~R~ 258 (348)
T 3iix_A 241 -EKKGDFTLTLKMVALTRI 258 (348)
T ss_dssp -SCCCCHHHHHHHHHHHHH
T ss_pred -CCCCCHHHHHHHHHHHHH
Confidence 355677888877766654
No 3
>1r30_A Biotin synthase; SAM radical protein, TIM barrel, FES cluster, transferase; HET: SAM DTB; 3.40A {Escherichia coli} SCOP: c.1.28.1
Probab=99.94 E-value=2.5e-25 Score=213.65 Aligned_cols=229 Identities=17% Similarity=0.226 Sum_probs=181.6
Q ss_pred HHHHHhcCCCHHHHHHHccCCCccccccCCCCceeeEEEEee-ccCCCCCCcCcccCCCC--C---CCCCCchhHHHHHH
Q 018731 68 EVKESLSSLKLNTVCEEAQCPNIGECWNGGGDGIATATIMLL-GDTCTRGCRFCAVKTSR--N---PAPPDPMEPENTAK 141 (351)
Q Consensus 68 ~~~~ll~~~~l~~l~~~A~~p~i~~~~~~~~~~~~~~~~i~~-s~gC~~~C~FC~~~~~~--~---~~~~~~eei~~~~~ 141 (351)
++..+++ .++..|+..|+ .+++..+++ +.+....++.+ +++|+++|.||.++... + ...++++++.+.++
T Consensus 34 e~~~l~~-~~~~~L~~~A~--~~~~~~~~~-~~v~~~~~i~i~t~~C~~~C~yC~~~~~~~~~~~~~~~~s~eei~~~~~ 109 (369)
T 1r30_A 34 QVTELFE-KPLLDLLFEAQ--QVHRQHFDP-RQVQVSTLLSIKTGACPEDCKYCPQSSRYKTGLEAERLMEVEQVLESAR 109 (369)
T ss_dssp TTHHHHH-SCHHHHHHHHH--HHHHHHSCT-TCCEEEEEEEEECSCBSSCCSSCSCBTTSCTTCCCCCCCCHHHHHHHHH
T ss_pred HHHHHHh-ccHHHHHHHHH--HHHHHhcCC-CEEEEEEEEEEECCCCcccCccCCCCCcCCCCCcccccCCHHHHHHHHH
Confidence 3455555 46778888888 887776643 45666777875 99999999999998632 1 12256789999998
Q ss_pred HHHhCCCcEEEEeccC--CCCCCCCcHHHHHHHHHHHHHhCCCcEEEEeecCCCCCHHHHHHHHHcCCCeeecchhchHH
Q 018731 142 AIASWGVDYIVLTSVD--RDDIPDGGSGHFARTVKAMKKQKPDIMVECLTSDFRGDLRAVETLVHSGLDVFAHNIETVKR 219 (351)
Q Consensus 142 ~~~~~G~~~I~ltgg~--~~~l~~~~~~~~~~li~~ik~~~p~i~i~~~~~~~~~~~e~l~~L~~aG~~~i~~~ies~~~ 219 (351)
.+.+.|++.|+|+||. +..+ ..+++.++++.+++. ++.+.+ +++. ++++.++.|+++|++++++++||.++
T Consensus 110 ~~~~~g~~~i~~~gg~~~p~~~---~~~~l~~ll~~ik~~--g~~i~~-t~G~-l~~e~l~~L~~aGvd~v~i~les~~e 182 (369)
T 1r30_A 110 KAKAAGSTRFCMGAAWKNPHER---DMPYLEQMVQGVKAM--GLEACM-TLGT-LSESQAQRLANAGLDYYNHNLDTSPE 182 (369)
T ss_dssp HHHHTTCSEEEEEECCSSCCTT---THHHHHHHHHHHHHT--TSEEEE-ECSS-CCHHHHHHHHHHCCCEEECCCBSCHH
T ss_pred HHHHcCCcEEEEEeCCCCCCcC---CHHHHHHHHHHHHHc--CCeEEE-ecCC-CCHHHHHHHHHCCCCEEeecCcCCHH
Confidence 8888999999998864 4322 368999999999986 455543 5554 59999999999999999999999545
Q ss_pred HHhhhcCCCCCHHHHHHHHHHHHHhCCCCeEEEeeeeeCCCCHHHHHHHHHHHHhCC--CCEEeeecccCC---CCCccc
Q 018731 220 LQRIVRDPRAGYEQSLEVLKHAKLSKKGLITKSSIMLGLGESDDDLKEAMADLRSID--VDILTLGQYLQP---TPLHLT 294 (351)
Q Consensus 220 ~~~~~r~~~~~~~~~l~~i~~~~~~~~Gi~v~~~~IvGlgEt~e~~~~~l~~l~~lg--~d~i~i~~~l~P---Tp~~~~ 294 (351)
.++.++ +++++++++++++.+++ .|+.+++++|+|+|||.+++.++++++++++ ++.++++.+ .| ||++.
T Consensus 183 ~~~~i~-~~~~~~~~l~~i~~a~~--~Gi~v~~~~I~Gl~et~ed~~~~l~~l~~l~~~~~~i~~~~l-~p~~gT~l~~- 257 (369)
T 1r30_A 183 FYGNII-TTRTYQERLDTLEKVRD--AGIKVCSGGIVGLGETVKDRAGLLLQLANLPTPPESVPINML-VKVKGTPLAD- 257 (369)
T ss_dssp HHHHHC-CSSCHHHHHHHHHHHHH--HHCEEECCEEECSSCCHHHHHHHHHHHHSSSSCCSEEEEEEC-CCCTTSTTSS-
T ss_pred HHHHhC-CCCCHHHHHHHHHHHHH--cCCeeeeeeEeeCCCCHHHHHHHHHHHHhhcCCCCEEEeeee-eecCCCcCCC-
Confidence 676666 46899999999999999 8999999999999999999999999999998 889999644 45 77752
Q ss_pred ccCCCCHHHHHHHHHHHHh
Q 018731 295 VKEYVTPEKFDFWKAYGES 313 (351)
Q Consensus 295 ~~~~v~~~e~~~~~~~~~~ 313 (351)
...++++++.++.+.++.
T Consensus 258 -~~~~~~~~~~~~~~~~r~ 275 (369)
T 1r30_A 258 -NDDVDAFDFIRTIAVARI 275 (369)
T ss_dssp -CCCCCHHHHHHHHHHHHH
T ss_pred -CCCCCHHHHHHHHHHHHH
Confidence 356788888887776655
No 4
>2qgq_A Protein TM_1862; alpha-beta protein, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; HET: CXS; 2.00A {Thermotoga maritima MSB8}
Probab=99.92 E-value=1.1e-23 Score=196.99 Aligned_cols=198 Identities=16% Similarity=0.255 Sum_probs=139.9
Q ss_pred eEEEEeeccCCCCCCcCcccCCCCCC-CCCCchhHHHHHHHHHhCCCcEEEEeccCCCCCCCC--cHHHHHHHHHHHHHh
Q 018731 103 TATIMLLGDTCTRGCRFCAVKTSRNP-APPDPMEPENTAKAIASWGVDYIVLTSVDRDDIPDG--GSGHFARTVKAMKKQ 179 (351)
Q Consensus 103 ~~~~i~~s~gC~~~C~FC~~~~~~~~-~~~~~eei~~~~~~~~~~G~~~I~ltgg~~~~l~~~--~~~~~~~li~~ik~~ 179 (351)
..+++.+++||+++|+||.++..++. ..++++++.++++.+.+.|+++|+|+|++...+... +.+.+.++++.+++.
T Consensus 4 ~~~~v~is~GC~~~C~fC~~~~~~g~~r~r~~e~i~~ei~~l~~~G~~ei~l~g~~~~~yG~~~~~~~~l~~Ll~~l~~~ 83 (304)
T 2qgq_A 4 PYAYVKISDGCDRGCTFCSIPSFKGSLRSRSIEDITREVEDLLKEGKKEIILVAQDTTSYGIDLYRKQALPDLLRRLNSL 83 (304)
T ss_dssp SEEEEESBCCC-------------CCCCBCCHHHHHHHHHHHHHTTCCEEEEECTTGGGTTHHHHSSCCHHHHHHHHHTS
T ss_pred EEEEEEECCCCCCcCccCCccccCCCceeeCHHHHHHHHHHHHHCCCcEEEEEeEcccccCCCCCcHHHHHHHHHHHHhc
Confidence 67889999999999999999886543 335678999999999889999999998764322100 014688999999875
Q ss_pred CCCc-EEEEe-ecCCCCCHHHHHHHHHcC--CCeeecchhchHH-HHhhhcCCCCCHHHHHHHHHHHHHhCCCCeEEEee
Q 018731 180 KPDI-MVECL-TSDFRGDLRAVETLVHSG--LDVFAHNIETVKR-LQRIVRDPRAGYEQSLEVLKHAKLSKKGLITKSSI 254 (351)
Q Consensus 180 ~p~i-~i~~~-~~~~~~~~e~l~~L~~aG--~~~i~~~ies~~~-~~~~~r~~~~~~~~~l~~i~~~~~~~~Gi~v~~~~ 254 (351)
+++ ++... ++...++++.++.|+++| ++++.+++||+++ ..+.++ ++++.++++++++.+++.++|+.+.+++
T Consensus 84 -~gi~~ir~~~~~p~~l~~e~l~~l~~~g~~~~~l~i~lqs~s~~vl~~m~-r~~t~e~~~~~i~~l~~~~~gi~i~~~~ 161 (304)
T 2qgq_A 84 -NGEFWIRVMYLHPDHLTEEIISAMLELDKVVKYFDVPVQHGSDKILKLMG-RTKSSEELKKMLSSIRERFPDAVLRTSI 161 (304)
T ss_dssp -SSSCEEEECCCCGGGCCHHHHHHHHHCTTBCCEEECCCBCSCHHHHHHTT-CCSCHHHHHHHHHHHHHHCTTCEEEEEE
T ss_pred -CCCcEEEEeeeecccCCHHHHHHHHhCCCCccEEEEecccCCHHHHHHhC-CCCCHHHHHHHHHHHHhhCCCCEEEEEE
Confidence 454 45432 222235899999999999 9999999999765 566665 5789999999999999877899999999
Q ss_pred eeeC-CCCHHHHHHHHHHHHhCCCCEEeeeccc-CC-CCCcccccCCCCHHH
Q 018731 255 MLGL-GESDDDLKEAMADLRSIDVDILTLGQYL-QP-TPLHLTVKEYVTPEK 303 (351)
Q Consensus 255 IvGl-gEt~e~~~~~l~~l~~lg~d~i~i~~~l-~P-Tp~~~~~~~~v~~~e 303 (351)
|+|+ |||.+++.++++++++++++.+.++.|. .| ||++.. ...++++.
T Consensus 162 IvG~PgEt~ed~~~t~~~l~~l~~~~v~~~~~~p~pgT~~~~~-~~~v~~~~ 212 (304)
T 2qgq_A 162 IVGFPGETEEDFEELKQFVEEIQFDKLGAFVYSDEEGTVAFNL-KEKVDPEM 212 (304)
T ss_dssp EECCTTCCHHHHHHHHHHHHHHCCSEEEEEECCC------------CCCHHH
T ss_pred EEeCCCCCHHHHHHHHHHHHHcCCCEEEEEEeeCCCCChhHhC-cCCCCHHH
Confidence 9999 9999999999999999999999997665 44 887632 23566543
No 5
>1olt_A Oxygen-independent coproporphyrinogen III oxidase; heme biosynthesis, decarboxylase, radical SAM enzyme, 4Fe- 4 cluster; HET: SAM; 2.07A {Escherichia coli} SCOP: c.1.28.2
Probab=99.89 E-value=3.8e-22 Score=196.64 Aligned_cols=218 Identities=15% Similarity=0.245 Sum_probs=161.2
Q ss_pred EEEEeeccCCCCCCcCcccCCCCCCC----CCCchhHHHHHHHHHhC----CCcEEEEeccCCCCCCCCcHHHHHHHHHH
Q 018731 104 ATIMLLGDTCTRGCRFCAVKTSRNPA----PPDPMEPENTAKAIASW----GVDYIVLTSVDRDDIPDGGSGHFARTVKA 175 (351)
Q Consensus 104 ~~~i~~s~gC~~~C~FC~~~~~~~~~----~~~~eei~~~~~~~~~~----G~~~I~ltgg~~~~l~~~~~~~~~~li~~ 175 (351)
..++.+ ++|+.+|.||.++...... ..+.+.+.++++.+.+. ++..|+|+||+|..++ .+++.++++.
T Consensus 54 ~lYihI-pfC~~~C~yC~~~~~~~~~~~~~~~~~~~l~~Ei~~~~~~~~~~~i~~i~fgGGtpt~l~---~~~l~~ll~~ 129 (457)
T 1olt_A 54 SLYVHI-PFCHKLCYFCGCNKIVTRQQHKADQYLDALEQEIVHRAPLFAGRHVSQLHWGGGTPTYLN---KAQISRLMKL 129 (457)
T ss_dssp EEEEEE-CEESSCCTTCCSSCEECSCTHHHHHHHHHHHHHHHHHGGGGTTCCEEEEEEEESCGGGSC---HHHHHHHHHH
T ss_pred EEEEEc-CCCCCCCCCCCCceeccCCcchHHHHHHHHHHHHHHHHHhcCCCceEEEEEeCCCcccCC---HHHHHHHHHH
Confidence 334444 4799999999997642111 12345566666655432 4678999999976454 5789999999
Q ss_pred HHHhCC---CcEEEEee-cCCCCCHHHHHHHHHcCCCeeecchhchHH-HHhhhcCCCCCHHHHHHHHHHHHHhCCCCe-
Q 018731 176 MKKQKP---DIMVECLT-SDFRGDLRAVETLVHSGLDVFAHNIETVKR-LQRIVRDPRAGYEQSLEVLKHAKLSKKGLI- 249 (351)
Q Consensus 176 ik~~~p---~i~i~~~~-~~~~~~~e~l~~L~~aG~~~i~~~ies~~~-~~~~~r~~~~~~~~~l~~i~~~~~~~~Gi~- 249 (351)
+++.++ +..+.+.+ |+. ++++.++.|+++|+++|++|+||+++ ..+.++ +++++++++++++.+++ .|+.
T Consensus 130 i~~~~~~~~~~eitie~~p~~-l~~e~l~~L~~~G~~rislGvQS~~~~~l~~i~-R~~~~~~~~~ai~~~r~--~G~~~ 205 (457)
T 1olt_A 130 LRENFQFNADAEISIEVDPRE-IELDVLDHLRAEGFNRLSMGVQDFNKEVQRLVN-REQDEEFIFALLNHARE--IGFTS 205 (457)
T ss_dssp HHHHSCEEEEEEEEEEECSSS-CCTHHHHHHHHTTCCEEEEEEECCCHHHHHHHT-CCCCHHHHHHHHHHHHH--TTCCS
T ss_pred HHHhCCCCCCcEEEEEEccCc-CCHHHHHHHHHcCCCEEEEeeccCCHHHHHHhC-CCCCHHHHHHHHHHHHH--cCCCc
Confidence 998643 22333333 444 58999999999999999999999865 555565 58999999999999999 9998
Q ss_pred EEEeeeeeC-CCCHHHHHHHHHHHHhCCCCEEeeeccc-CC-CCCcccc---cCCCCHHH----HHHHHHHHHhcCccee
Q 018731 250 TKSSIMLGL-GESDDDLKEAMADLRSIDVDILTLGQYL-QP-TPLHLTV---KEYVTPEK----FDFWKAYGESIGFRYV 319 (351)
Q Consensus 250 v~~~~IvGl-gEt~e~~~~~l~~l~~lg~d~i~i~~~l-~P-Tp~~~~~---~~~v~~~e----~~~~~~~~~~~G~~~~ 319 (351)
+++++|+|+ |||.+++.++++++.+++++++.++++. .| |+..... ....++++ +....+.+...||.++
T Consensus 206 v~~dlI~GlPget~e~~~~tl~~~~~l~~~~i~~y~l~~~p~t~~~~~~~~~~~lp~~~~~~~~~~~~~~~L~~~Gy~~y 285 (457)
T 1olt_A 206 TNIDLIYGLPKQTPESFAFTLKRVAELNPDRLSVFNYAHLPTIFAAQRKIKDADLPSPQQKLDILQETIAFLTQSGYQFI 285 (457)
T ss_dssp CEEEEEESCTTCCHHHHHHHHHHHHHHCCSEEEEEECCCCTTTSGGGGGSCGGGSCCHHHHHHHHHHHHHHHHHTTCEEE
T ss_pred EEEEEEcCCCCCCHHHHHHHHHHHHhcCcCEEEeecCcCCcCchhHhhccccCCCcCHHHHHHHHHHHHHHHHHCCCeEE
Confidence 999999999 9999999999999999999999997665 34 4433211 12234433 3345566777899999
Q ss_pred ccCccccccc
Q 018731 320 ASGPLVRSSY 329 (351)
Q Consensus 320 ~~~~~~r~~~ 329 (351)
+.++|++.+.
T Consensus 286 eis~fa~~~~ 295 (457)
T 1olt_A 286 GMDHFARPDD 295 (457)
T ss_dssp ETTEEECTTS
T ss_pred EechhcCCCc
Confidence 9999888654
No 6
>3c8f_A Pyruvate formate-lyase 1-activating enzyme; adoMet radical, SAM radical, activase, glycyl radical, 4Fe- 4S, carbohydrate metabolism, cytoplasm; HET: MT2 PGE; 2.25A {Escherichia coli} PDB: 3cb8_A*
Probab=99.78 E-value=3.3e-18 Score=153.65 Aligned_cols=201 Identities=13% Similarity=0.132 Sum_probs=146.1
Q ss_pred EEeeccCCCCCCcCcccCCCCC---CCCCCchhHHHHHHHHHhC---CCcEEEEeccCCCCCCCCcHHHHHHHHHHHHHh
Q 018731 106 IMLLGDTCTRGCRFCAVKTSRN---PAPPDPMEPENTAKAIASW---GVDYIVLTSVDRDDIPDGGSGHFARTVKAMKKQ 179 (351)
Q Consensus 106 ~i~~s~gC~~~C~FC~~~~~~~---~~~~~~eei~~~~~~~~~~---G~~~I~ltgg~~~~l~~~~~~~~~~li~~ik~~ 179 (351)
++.+|++||.+|.||..+.... ...++++++.+.++.+... ++..|.|+||+|. +. .+.+.++++.+++.
T Consensus 22 ~~i~t~~Cn~~C~~C~~~~~~~~~~~~~~~~~~i~~~i~~~~~~~~~~~~~i~~~GGEP~-l~---~~~l~~l~~~~~~~ 97 (245)
T 3c8f_A 22 FITFFQGCLMRCLYCHNRDTWDTHGGKEVTVEDLMKEVVTYRHFMNASGGGVTASGGEAI-LQ---AEFVRDWFRACKKE 97 (245)
T ss_dssp EEEEESCCSCCCTTCSCGGGCCTTCSEEECHHHHHHHHGGGHHHHTSTTCEEEEEESCGG-GG---HHHHHHHHHHHHTT
T ss_pred EEEEeCCCCCCCCCCCCchhcccccCccCCHHHHHHHHHHhhhhhcCCCCeEEEECCCcC-CC---HHHHHHHHHHHHHc
Confidence 3456889999999999875321 1225667777777665443 4789999999973 32 34578999999986
Q ss_pred CCCcEEEEeecCCCC-CHHHHHHHHHcCCCeeecchhchHH-HHhhhcCCCCCHHHHHHHHHHHHHhCCCCeEEEeee--
Q 018731 180 KPDIMVECLTSDFRG-DLRAVETLVHSGLDVFAHNIETVKR-LQRIVRDPRAGYEQSLEVLKHAKLSKKGLITKSSIM-- 255 (351)
Q Consensus 180 ~p~i~i~~~~~~~~~-~~e~l~~L~~aG~~~i~~~ies~~~-~~~~~r~~~~~~~~~l~~i~~~~~~~~Gi~v~~~~I-- 255 (351)
++.+.+.|++... +.+.++.|+++ ++.+.+++++.++ .++.++ +.++++++++++.+++ .|+.+...++
T Consensus 98 --~~~i~i~Tng~~~~~~~~~~~l~~~-~~~v~isld~~~~~~~~~~~--~~~~~~~~~~i~~l~~--~g~~v~i~~~~~ 170 (245)
T 3c8f_A 98 --GIHTCLDTNGFVRRYDPVIDELLEV-TDLVMLDLKQMNDEIHQNLV--GVSNHRTLEFAKYLAN--KNVKVWIRYVVV 170 (245)
T ss_dssp --TCCEEEEECCCCCCCCHHHHHHHHT-CSEEEEECCCSSHHHHHHHH--SSCSHHHHHHHHHHHH--HTCCEEEEEEEC
T ss_pred --CCcEEEEeCCCcCcCHHHHHHHHHh-CCEEEEeCCCCCHHHhhhcc--CCCHHHHHHHHHHHHh--cCCEEEEEEeec
Confidence 5666666665432 67788889888 9999999999754 676676 3456999999999999 7887665544
Q ss_pred eeCCCCHHHHHHHHHHHHhCCC-CEEeeecccCCCCCc----------ccccCCCCHHHHHHHHHHHHhcCcce
Q 018731 256 LGLGESDDDLKEAMADLRSIDV-DILTLGQYLQPTPLH----------LTVKEYVTPEKFDFWKAYGESIGFRY 318 (351)
Q Consensus 256 vGlgEt~e~~~~~l~~l~~lg~-d~i~i~~~l~PTp~~----------~~~~~~v~~~e~~~~~~~~~~~G~~~ 318 (351)
.|++++.+++.++++++.++++ +.+.+.++. |++.. .......+.+++.++.+.+++.||..
T Consensus 171 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~v 243 (245)
T 3c8f_A 171 PGWSDDDDSAHRLGEFTRDMGNVEKIELLPYH-ELGKHKWVAMGEEYKLDGVKPPKKETMERVKGILEQYGHKV 243 (245)
T ss_dssp TTTTCCHHHHHHHHHHHHHHCCEEEEEEEECC-CCSHHHHHHTTCCCTTTTCCCCCHHHHHHHHHHHHTTTCCB
T ss_pred CCCCCCHHHHHHHHHHHHhcCCCceeEEEecc-ccChhHHHhhCcccccccCCCCCHHHHHHHHHHHHhcCCee
Confidence 4456888999999999999996 667775443 42211 11124567788999999999999864
No 7
>1tv8_A MOAA, molybdenum cofactor biosynthesis protein A; TIM barrel, ligand binding protein; HET: SAM; 2.20A {Staphylococcus aureus} SCOP: c.1.28.3 PDB: 1tv7_A* 2fb3_A* 2fb2_A*
Probab=99.78 E-value=1.2e-17 Score=158.31 Aligned_cols=193 Identities=16% Similarity=0.188 Sum_probs=143.5
Q ss_pred eEEEEeeccCCCCCCcCcccCC----CC----CCCCCCchhHHHHHHHHHhCCCcEEEEeccCCCCCCCCcHHHHHHHHH
Q 018731 103 TATIMLLGDTCTRGCRFCAVKT----SR----NPAPPDPMEPENTAKAIASWGVDYIVLTSVDRDDIPDGGSGHFARTVK 174 (351)
Q Consensus 103 ~~~~i~~s~gC~~~C~FC~~~~----~~----~~~~~~~eei~~~~~~~~~~G~~~I~ltgg~~~~l~~~~~~~~~~li~ 174 (351)
....+.+|++||.+|.||.... .. ....++.+++.+.++.+.+.|++.|.|+||+|. +. ..+.++++
T Consensus 14 ~~l~i~~T~~CNl~C~yC~~~~~~~~~~~~~~~~~~ls~e~i~~~i~~~~~~g~~~i~~tGGEPl-l~----~~l~~li~ 88 (340)
T 1tv8_A 14 RDLRLSVTDRCNFRCDYCMPKEVFGDDFVFLPKNELLTFDEMARIAKVYAELGVKKIRITGGEPL-MR----RDLDVLIA 88 (340)
T ss_dssp CEEEEECCSCCSCCCTTTSCTTTSSTTCCCCCGGGSCCHHHHHHHHHHHHHTTCCEEEEESSCGG-GS----TTHHHHHH
T ss_pred CeEEEEeCCCcCCcCCCCCcCcccCCCcccCCccCCCCHHHHHHHHHHHHHCCCCEEEEeCCCcc-ch----hhHHHHHH
Confidence 3455678999999999998765 11 112367789999999988999999999999973 32 25778888
Q ss_pred HHHHhCCCcEEEEeecCCCCCHHHHHHHHHcCCCeeecchhchHH-HHhhhcCCCC-CHHHHHHHHHHHHHhCCCCeEEE
Q 018731 175 AMKKQKPDIMVECLTSDFRGDLRAVETLVHSGLDVFAHNIETVKR-LQRIVRDPRA-GYEQSLEVLKHAKLSKKGLITKS 252 (351)
Q Consensus 175 ~ik~~~p~i~i~~~~~~~~~~~e~l~~L~~aG~~~i~~~ies~~~-~~~~~r~~~~-~~~~~l~~i~~~~~~~~Gi~v~~ 252 (351)
.+++...-..+.+.|++.. ..+.++.|+++|++.|.+++++.++ .++.++ +.. ++++++++++.+++ .|+.+..
T Consensus 89 ~~~~~~~~~~i~i~TNG~l-l~~~~~~L~~~g~~~v~iSld~~~~~~~~~i~-~~~~~~~~v~~~i~~l~~--~g~~v~i 164 (340)
T 1tv8_A 89 KLNQIDGIEDIGLTTNGLL-LKKHGQKLYDAGLRRINVSLDAIDDTLFQSIN-NRNIKATTILEQIDYATS--IGLNVKV 164 (340)
T ss_dssp HHTTCTTCCEEEEEECSTT-HHHHHHHHHHHTCCEEEEECCCSSHHHHHHHH-SSCCCHHHHHHHHHHHHH--TTCEEEE
T ss_pred HHHhCCCCCeEEEEeCccc-hHHHHHHHHHCCCCEEEEecCCCCHHHHHHhh-CCCCCHHHHHHHHHHHHH--CCCCEEE
Confidence 8887632125666666554 3568999999999999999999865 566565 345 89999999999999 9999888
Q ss_pred eeeeeCCCCHHHHHHHHHHHHhCCCCEEeeecccCCCCCc--ccccCCCCHHHHHH
Q 018731 253 SIMLGLGESDDDLKEAMADLRSIDVDILTLGQYLQPTPLH--LTVKEYVTPEKFDF 306 (351)
Q Consensus 253 ~~IvGlgEt~e~~~~~l~~l~~lg~d~i~i~~~l~PTp~~--~~~~~~v~~~e~~~ 306 (351)
.+++.-|++.+++.+++++++++|++ +.+..+ .|.+.. +.....++.+++.+
T Consensus 165 ~~vv~~g~n~~ei~~~~~~~~~~g~~-~~~i~~-~p~~~~~~~~~~~~~~~~e~~~ 218 (340)
T 1tv8_A 165 NVVIQKGINDDQIIPMLEYFKDKHIE-IRFIEF-MDVGNDNGWDFSKVVTKDEMLT 218 (340)
T ss_dssp EEEECTTTTGGGHHHHHHHHHHTTCC-EEEEEC-CCBCSSSSBCCSSCCCHHHHHH
T ss_pred EEEEeCCCCHHHHHHHHHHHHhcCCe-EEEEEe-eEcCCCccchhhcCCCHHHHHH
Confidence 88874488999999999999999998 444334 462221 11234566665543
No 8
>2yx0_A Radical SAM enzyme; predicted tRNA modification enzyme, metal binding protein, structural genomics, NPPSFA; 2.21A {Pyrococcus horikoshii}
Probab=99.69 E-value=1.4e-15 Score=144.22 Aligned_cols=194 Identities=13% Similarity=0.085 Sum_probs=139.4
Q ss_pred ec-cCCCCCCcCcccCCCC------CCCCCCchhHHHHHHHHHh------C--------------CCcEEEEe-ccCCCC
Q 018731 109 LG-DTCTRGCRFCAVKTSR------NPAPPDPMEPENTAKAIAS------W--------------GVDYIVLT-SVDRDD 160 (351)
Q Consensus 109 ~s-~gC~~~C~FC~~~~~~------~~~~~~~eei~~~~~~~~~------~--------------G~~~I~lt-gg~~~~ 160 (351)
.+ +||+.+|.||..+... .....+++++.+.+..... . .++.|+|+ ||+|.
T Consensus 76 ~~~~gCnl~C~fC~~~~~~~~~~~~~~~~~~~eei~~~i~~~~~~~~~~~~g~~~v~~~~~~e~~~~~~v~~sggGEPl- 154 (342)
T 2yx0_A 76 PVLAWCTHNCIFCWRPMENFLGTELPQPWDDPAFIVEESIKAQRKLLIGYKGNPKVDKKKFEEAWNPTHAAISLSGEPM- 154 (342)
T ss_dssp SCSSCCSBCCTTCCCSSSSCSCSSCCSSCCCHHHHHHHHHHHHHHHHTTCC--CCSCHHHHHHHTSCCEEEECSSSCGG-
T ss_pred eChhhhhCcCcccCCCCCCCcccccccCcCCHHHHHHHHHHHHHHHhhccCCCcccchhhhhhccCCCEEEEcCCCccc-
Confidence 44 7999999999986532 1123556777665544321 1 25779997 88863
Q ss_pred CCCCcHHHHHHHHHHHHHhCCCcEEEEeecCCCCCHHHHHHHHHcC--CCeeecchhchH-HHHhhhcCC--CCCHHHHH
Q 018731 161 IPDGGSGHFARTVKAMKKQKPDIMVECLTSDFRGDLRAVETLVHSG--LDVFAHNIETVK-RLQRIVRDP--RAGYEQSL 235 (351)
Q Consensus 161 l~~~~~~~~~~li~~ik~~~p~i~i~~~~~~~~~~~e~l~~L~~aG--~~~i~~~ies~~-~~~~~~r~~--~~~~~~~l 235 (351)
+. ..+.++++.+++. ++.+.+.|++.. ++.++.|+++| ++.+.+++++.+ +.++.++++ +.++++++
T Consensus 155 l~----~~l~~ll~~~~~~--g~~i~l~TNG~~--~e~l~~L~~~g~~~~~l~isld~~~~e~~~~i~~~~~~~~~~~~~ 226 (342)
T 2yx0_A 155 LY----PYMGDLVEEFHKR--GFTTFIVTNGTI--PERLEEMIKEDKLPTQLYVSITAPDIETYNSVNIPMIPDGWERIL 226 (342)
T ss_dssp GS----TTHHHHHHHHHHT--TCEEEEEECSCC--HHHHHHHHHTTCCCSEEEEEECCSSHHHHHHHHCBSSSCHHHHHH
T ss_pred ch----hhHHHHHHHHHHC--CCcEEEEcCCCc--HHHHHHHHhcCCCCCEEEEEccCCCHHHHHHHhCCCcccHHHHHH
Confidence 32 2688889888886 677777666543 88899999998 999999999975 466666522 45799999
Q ss_pred HHHHHHHHhCCCCeEEEeeeeeCCCCHHHHHHHHHHHHhCCCCEEeeeccc-CCCCCc-ccccCCCCHHHHHHHHHHHHh
Q 018731 236 EVLKHAKLSKKGLITKSSIMLGLGESDDDLKEAMADLRSIDVDILTLGQYL-QPTPLH-LTVKEYVTPEKFDFWKAYGES 313 (351)
Q Consensus 236 ~~i~~~~~~~~Gi~v~~~~IvGlgEt~e~~~~~l~~l~~lg~d~i~i~~~l-~PTp~~-~~~~~~v~~~e~~~~~~~~~~ 313 (351)
++++.+++ .|+.+...+++.-|+|.+++.++++++++++++.+.+..|. .|++.. .......+++++.++.+.+.+
T Consensus 227 ~~i~~l~~--~g~~v~i~~~l~~g~n~~~~~~l~~~l~~~~~~~i~l~~~~~~~~~~~~l~~~~~~~~e~~~~~~~~l~~ 304 (342)
T 2yx0_A 227 RFLELMRD--LPTRTVVRLTLVKGENMHSPEKYAKLILKARPMFVEAKAYMFVGYSRNRLTINNMPSHQDIREFAEALVK 304 (342)
T ss_dssp HHHHHHTT--CSSEEEEEEEECTTTTCCCHHHHHHHHHHHCCSEEEEEECC------CCCCGGGSCCHHHHHHHHHHHHT
T ss_pred HHHHHHHh--CCCCEEEEEEEECCccHHHHHHHHHHHHHcCCCEEEEEeeeecCCCcccccccCCCCHHHHHHHHHHHHH
Confidence 99999999 89998888888558888889999999999999998875443 222111 111245677888887777665
No 9
>2z2u_A UPF0026 protein MJ0257; metal binding protein; 2.40A {Methanocaldococcus jannaschii}
Probab=99.61 E-value=6.4e-15 Score=137.69 Aligned_cols=199 Identities=14% Similarity=0.163 Sum_probs=124.6
Q ss_pred EEEEeec-cCCCCCCcCcccCCCC----------CCCCCCchhHHHHHHHHHh---------------------CCCcEE
Q 018731 104 ATIMLLG-DTCTRGCRFCAVKTSR----------NPAPPDPMEPENTAKAIAS---------------------WGVDYI 151 (351)
Q Consensus 104 ~~~i~~s-~gC~~~C~FC~~~~~~----------~~~~~~~eei~~~~~~~~~---------------------~G~~~I 151 (351)
...+.++ .+||.+|.||..+... ....++++++.+.+..... ..++.|
T Consensus 52 ~l~i~~t~~~Cn~~C~fC~~~~~~~~~~~~~~~~~~~~~~~eei~~~~~~~~~~~~~~~~g~~~v~~~~r~~~~~~~~~i 131 (311)
T 2z2u_A 52 CIQCTPSVIWCQQNCIFCWRVLPRDIGIDISQIKEPKWEEPEVVYEKILAMHKRIIMGYAGVLDRVGEKKFKEALEPKHV 131 (311)
T ss_dssp EEEEESCSSCCSCC----------------CCSCCCCCCCHHHHHHHHHHHHHHHHHGGGGGHHHHCHHHHHHHTSCCEE
T ss_pred eEEeccChhHHhCcCcccCCCCCCcccccccccCccccCCHHHHHHHHHHHHHHHhhccCCCcCcchhhhhhhccCCCEE
Confidence 3445677 7999999999966411 1133566777655443211 225689
Q ss_pred EEe-ccCCCCCCCCcHHHHHHHHHHHHHhCCCcEEEEeecCCCCCHHHHHHHHHcCCCeeecchhchHH-HHhhhcCC-C
Q 018731 152 VLT-SVDRDDIPDGGSGHFARTVKAMKKQKPDIMVECLTSDFRGDLRAVETLVHSGLDVFAHNIETVKR-LQRIVRDP-R 228 (351)
Q Consensus 152 ~lt-gg~~~~l~~~~~~~~~~li~~ik~~~p~i~i~~~~~~~~~~~e~l~~L~~aG~~~i~~~ies~~~-~~~~~r~~-~ 228 (351)
.|+ ||+|. +. +.+.++++.+++. ++.+.+.|++.. ++.++.| |++.+.+++++.++ .++.+++. .
T Consensus 132 ~~s~gGEPl-l~----~~l~~li~~~~~~--g~~~~l~TNG~~--~~~l~~L---~~~~v~isld~~~~~~~~~i~~~~~ 199 (311)
T 2z2u_A 132 AISLSGEPT-LY----PYLDELIKIFHKN--GFTTFVVSNGIL--TDVIEKI---EPTQLYISLDAYDLDSYRRICGGKK 199 (311)
T ss_dssp EECSSSCGG-GS----TTHHHHHHHHHHT--TCEEEEEECSCC--HHHHHHC---CCSEEEEECCCSSTTTC----CCCH
T ss_pred EEeCCcCcc-ch----hhHHHHHHHHHHC--CCcEEEECCCCC--HHHHHhC---CCCEEEEEeecCCHHHHHHHhCCcc
Confidence 998 78874 32 3588999999886 677777666542 5555544 89999999999754 56666522 1
Q ss_pred CCHHHHHHHHHHHHHhCCCCeEEEeeeeeCCCCHHHHHHHHHHHHhCCCCEEeeecccCC---CCCcccccCCCCHHHHH
Q 018731 229 AGYEQSLEVLKHAKLSKKGLITKSSIMLGLGESDDDLKEAMADLRSIDVDILTLGQYLQP---TPLHLTVKEYVTPEKFD 305 (351)
Q Consensus 229 ~~~~~~l~~i~~~~~~~~Gi~v~~~~IvGlgEt~e~~~~~l~~l~~lg~d~i~i~~~l~P---Tp~~~~~~~~v~~~e~~ 305 (351)
.++++++++++.+++ .| .+...+++.-|.+. ++.++++++++++++.+.+.+|. | ++..+......+++++.
T Consensus 200 ~~~~~v~~~i~~l~~--~g-~v~i~~~~~~g~n~-~~~~~~~~~~~~~~~~i~l~~~~-p~g~~~~~~~~~~~~~~~e~~ 274 (311)
T 2z2u_A 200 EYWESILNTLDILKE--KK-RTCIRTTLIRGYND-DILKFVELYERADVHFIELKSYM-HVGYSQKRLKKEDMLQHDEIL 274 (311)
T ss_dssp HHHHHHHHHHHHHTT--SS-SEEEEEEECTTTTC-CGGGTHHHHHHHTCSEEEEEECC-------------CCCCHHHHH
T ss_pred chHHHHHHHHHHHHh--cC-CEEEEEEEECCcch-hHHHHHHHHHHcCCCEEEEEeeE-EccccccccccccCCCHHHHH
Confidence 579999999999998 77 66555554336666 88999999999999999986554 5 33222123467888888
Q ss_pred HHHHHHHh-cCccee
Q 018731 306 FWKAYGES-IGFRYV 319 (351)
Q Consensus 306 ~~~~~~~~-~G~~~~ 319 (351)
++.+.+.+ .|+...
T Consensus 275 ~~~~~l~~~~g~~~~ 289 (311)
T 2z2u_A 275 KLAKMLDENSSYKLI 289 (311)
T ss_dssp HHHHHHHTSSSEEEE
T ss_pred HHHHHHHHhcCceEE
Confidence 87777766 787654
No 10
>3rfa_A Ribosomal RNA large subunit methyltransferase N; radical SAM, S-adenosylmethionine, iron sulfur cluster, oxidoreductase; HET: SAM; 2.05A {Escherichia coli} PDB: 3rf9_A*
Probab=99.55 E-value=1.9e-13 Score=131.41 Aligned_cols=196 Identities=12% Similarity=0.101 Sum_probs=139.1
Q ss_pred eccCCCCCCcCcccCCCCCCCCCCchhHHHHHHHHHh----------CCCcEEEEe-ccCCCCCCCCcHHHHHHHHHHHH
Q 018731 109 LGDTCTRGCRFCAVKTSRNPAPPDPMEPENTAKAIAS----------WGVDYIVLT-SVDRDDIPDGGSGHFARTVKAMK 177 (351)
Q Consensus 109 ~s~gC~~~C~FC~~~~~~~~~~~~~eei~~~~~~~~~----------~G~~~I~lt-gg~~~~l~~~~~~~~~~li~~ik 177 (351)
.+.||+.+|.||..........++++|+.+.+..... .++..|+|+ ||+|. +. .+.+.++++.++
T Consensus 121 sq~GCnl~C~fC~tg~~g~~r~Lt~eEIv~qv~~~~~~~~~~g~~gg~~i~~Ivf~GgGEPL-ln---~d~v~~~i~~lk 196 (404)
T 3rfa_A 121 SQVGCALECKFCSTAQQGFNRNLRVSEIIGQVWRAAKIVGAAKVTGQRPITNVVMMGMGEPL-LN---LNNVVPAMEIML 196 (404)
T ss_dssp CEEECSSCCTTCGGGTTCEEEECCHHHHHHHHHHHHHHHCCHHHHSSCSCSEEEECSSSCGG-GC---HHHHHHHHHHHH
T ss_pred eCCCCCCcCCCCCCCCCCCCCcCCHHHHHHHHHHHHHHhhhcccccCCCccEEEEeCCCCcc-cC---HHHHHHHHHHHH
Confidence 4689999999999875432234778898877765432 247899999 58862 32 578899999998
Q ss_pred HhCCCc-----EEEEeecCCCCCHHHHHHHHHcCCCeeecchhchHH-HHhhhcC--CCCCHHHHHHHHHHH-HHhCCCC
Q 018731 178 KQKPDI-----MVECLTSDFRGDLRAVETLVHSGLDVFAHNIETVKR-LQRIVRD--PRAGYEQSLEVLKHA-KLSKKGL 248 (351)
Q Consensus 178 ~~~p~i-----~i~~~~~~~~~~~e~l~~L~~aG~~~i~~~ies~~~-~~~~~r~--~~~~~~~~l~~i~~~-~~~~~Gi 248 (351)
+.. ++ .+.+.|++.. +.++.|.+.+...+.+++.+.++ .++.+.+ ++.+.++++++++.. .+ .|.
T Consensus 197 ~~~-Gl~~s~r~itlsTnG~~---p~i~~L~~~~d~~LaiSLka~d~e~~~~i~pv~~~~~le~vl~ai~~~~~~--~g~ 270 (404)
T 3rfa_A 197 DDF-GFGLSKRRVTLSTSGVV---PALDKLGDMIDVALAISLHAPNDEIRDEIVPINKKYNIETFLAAVRRYLEK--SNA 270 (404)
T ss_dssp STT-TTCCCGGGEEEEESCCH---HHHHHHHHHCCCEEEEECCCSSHHHHHHHSGGGGTSCHHHHHHHHHHHHHH--CTT
T ss_pred hhc-CcCcCCCceEEECCCcH---HHHHHHHHhhcceEEecccCCCHHHHHHhcCCccCCCHHHHHHHHHHHHHH--hCC
Confidence 742 44 5666666542 56788888866677889998765 5654431 256899999999544 45 454
Q ss_pred ---e--EEEeeeeeCCCCHHHHHHHHHHHHhCCCCEEeeecccCCCCCcccccCCCCHHHHHHHHHHHHhcCcce
Q 018731 249 ---I--TKSSIMLGLGESDDDLKEAMADLRSIDVDILTLGQYLQPTPLHLTVKEYVTPEKFDFWKAYGESIGFRY 318 (351)
Q Consensus 249 ---~--v~~~~IvGlgEt~e~~~~~l~~l~~lg~d~i~i~~~l~PTp~~~~~~~~v~~~e~~~~~~~~~~~G~~~ 318 (351)
. +...+|-|++++.+++.++++++++++. .+.+.+| .|.+.. .....+++++.+++++++..|+.-
T Consensus 271 ~~~~V~ie~vLI~GvNDs~e~~~~La~ll~~l~~-~VnLIpy-nP~~~~--~~~~ps~e~i~~f~~iL~~~Gi~v 341 (404)
T 3rfa_A 271 NQGRVTIEYVMLDHVNDGTEHAHQLAELLKDTPC-KINLIPW-NPFPGA--PYGRSSNSRIDRFSKVLMSYGFTT 341 (404)
T ss_dssp TTTCEEEEEEEBTTTTCSHHHHHHHHHHTTTSCE-EEEEEEC-CCCTTC--CCCBCCHHHHHHHHHHHHHTTCEE
T ss_pred CcccEEEEEEEecCCCCCHHHHHHHHHHHHcCCC-cEEEEec-cCCCCC--CCCCCCHHHHHHHHHHHHHcCCcE
Confidence 4 4555666889999999999999999875 4555444 464432 234567889999999999998853
No 11
>2a5h_A L-lysine 2,3-aminomutase; radical SAM, four-iron-four-sulfur cluster, 4Fe4S, FS4, SAM, adenosylmethionine, alpha-beta channel; HET: SAM LYS PLP; 2.10A {Clostridium subterminale}
Probab=99.51 E-value=5.1e-13 Score=129.76 Aligned_cols=163 Identities=16% Similarity=0.171 Sum_probs=123.4
Q ss_pred EEEEeeccCCCCCCcCcccCCCCC-C-CCCCchhHHHHHHHHHh-CCCcEEEEeccCCCCCCCCcHHHHHHHHHHHHHhC
Q 018731 104 ATIMLLGDTCTRGCRFCAVKTSRN-P-APPDPMEPENTAKAIAS-WGVDYIVLTSVDRDDIPDGGSGHFARTVKAMKKQK 180 (351)
Q Consensus 104 ~~~i~~s~gC~~~C~FC~~~~~~~-~-~~~~~eei~~~~~~~~~-~G~~~I~ltgg~~~~l~~~~~~~~~~li~~ik~~~ 180 (351)
...+.+|++|+.+|.||......+ . ..++.+++.+.++.+.+ .|++.|.|+||+|...+ -+.+.++++.+++.
T Consensus 116 ~v~l~vT~~Cnl~C~yC~~~~~~~~~~~~ls~eei~~~i~~i~~~~gi~~V~ltGGEPll~~---d~~L~~il~~l~~~- 191 (416)
T 2a5h_A 116 RVLLLITDMCSMYCRHCTRRRFAGQSDDSMPMERIDKAIDYIRNTPQVRDVLLSGGDALLVS---DETLEYIIAKLREI- 191 (416)
T ss_dssp EEEEEEESCCSSCCTTCTTTTTTTSSSSBCCHHHHHHHHHHHHTCTTCCEEEEEESCTTSSC---HHHHHHHHHHHHTS-
T ss_pred EEEEecCCCccccCcCCCCcccCCCccCCCCHHHHHHHHHHHHhcCCCcEEEEECCCCCCCC---HHHHHHHHHHHHhc-
Confidence 456678999999999998765332 1 23667889888888887 79999999999974333 13588999999874
Q ss_pred CCc-EEEEeecC-----CCCCHHHHHHHHHcCCCeeecchhchHHHHhhhcCCCCCHHHHHHHHHHHHHhCCCCeEEEee
Q 018731 181 PDI-MVECLTSD-----FRGDLRAVETLVHSGLDVFAHNIETVKRLQRIVRDPRAGYEQSLEVLKHAKLSKKGLITKSSI 254 (351)
Q Consensus 181 p~i-~i~~~~~~-----~~~~~e~l~~L~~aG~~~i~~~ies~~~~~~~~r~~~~~~~~~l~~i~~~~~~~~Gi~v~~~~ 254 (351)
+++ .+.+.|++ ..++++.++.|+++ +.+.+++++... +. -+ ++++++++.+++ .|+.+....
T Consensus 192 ~~v~~i~i~Tng~~~~p~~it~e~l~~L~~~--~~v~Isl~~~~~--~e-----i~-~~v~~ai~~L~~--aGi~v~i~~ 259 (416)
T 2a5h_A 192 PHVEIVRIGSRTPVVLPQRITPELVNMLKKY--HPVWLNTHFNHP--NE-----IT-EESTRACQLLAD--AGVPLGNQS 259 (416)
T ss_dssp TTCCEEEEECSHHHHCGGGCCHHHHHHHGGG--CSEEEEECCCSG--GG-----CC-HHHHHHHHHHHH--TTCCEEEEE
T ss_pred CCccEEEEEecccccccccCCHHHHHHHHhc--CcEEEEEecCCH--HH-----Hh-HHHHHHHHHHHH--cCCEEEEEE
Confidence 444 45554443 23579999999998 778888877433 11 12 899999999999 899766554
Q ss_pred ee--eCCCCHHHHHHHHHHHHhCCCCEEee
Q 018731 255 ML--GLGESDDDLKEAMADLRSIDVDILTL 282 (351)
Q Consensus 255 Iv--GlgEt~e~~~~~l~~l~~lg~d~i~i 282 (351)
++ |++++.+++.++++++.++|++...+
T Consensus 260 vll~GvNd~~e~l~~l~~~l~~lgv~~~~i 289 (416)
T 2a5h_A 260 VLLRGVNDCVHVMKELVNKLVKIRVRPYYI 289 (416)
T ss_dssp ECCTTTTCSHHHHHHHHHHHHHTTEEEEEE
T ss_pred EEECCCCCCHHHHHHHHHHHHHcCCceEEE
Confidence 44 78899999999999999999987666
No 12
>3can_A Pyruvate-formate lyase-activating enzyme; structural genomics, pyruvate-formate lyase-activating enzym MCSG, APC20359.1; 1.80A {Bacteroides vulgatus atcc 8482}
Probab=99.16 E-value=1e-09 Score=94.19 Aligned_cols=157 Identities=11% Similarity=0.129 Sum_probs=115.7
Q ss_pred cEEEEeccCCCCCCCCcHHHH-HHHHHHHHHhCCCcEEEEeecCCCCCHHHHHHHHHcCCCeeecchhchH-HHHhhhcC
Q 018731 149 DYIVLTSVDRDDIPDGGSGHF-ARTVKAMKKQKPDIMVECLTSDFRGDLRAVETLVHSGLDVFAHNIETVK-RLQRIVRD 226 (351)
Q Consensus 149 ~~I~ltgg~~~~l~~~~~~~~-~~li~~ik~~~p~i~i~~~~~~~~~~~e~l~~L~~aG~~~i~~~ies~~-~~~~~~r~ 226 (351)
..|.|+||+|. +. .++ .++++.+++. ++.+.+.|++. ++++.++.|.++ ++.+.+++++.+ +.++.++
T Consensus 5 ~~v~~tGGEPl-l~----~~~~~~l~~~~~~~--g~~~~l~TNG~-l~~~~~~~l~~~-~d~v~isld~~~~~~~~~~~- 74 (182)
T 3can_A 5 GGVTFCGGEPL-LH----PEFLIDILKRCGQQ--GIHRAVDTTLL-ARKETVDEVMRN-CELLLIDLKSMDSTVHQTFC- 74 (182)
T ss_dssp CCEEECSSTGG-GS----HHHHHHHHHHHHHT--TCCEEEECTTC-CCHHHHHHHHHT-CSEEEEECCCSCHHHHHHHH-
T ss_pred CEEEEEccccc-CC----HHHHHHHHHHHHHC--CCcEEEECCCC-CCHHHHHHHHhh-CCEEEEECCCCCHHHHHHHh-
Confidence 46899999973 33 345 6999999986 66777767766 588999999988 999999999974 4677777
Q ss_pred CCCCHHHHHHHHHHHHHhCCCCeEEEe--eeeeCCCCHHHHHHHHHHHHhC-CC-CEEeeecccCCCCCc----------
Q 018731 227 PRAGYEQSLEVLKHAKLSKKGLITKSS--IMLGLGESDDDLKEAMADLRSI-DV-DILTLGQYLQPTPLH---------- 292 (351)
Q Consensus 227 ~~~~~~~~l~~i~~~~~~~~Gi~v~~~--~IvGlgEt~e~~~~~l~~l~~l-g~-d~i~i~~~l~PTp~~---------- 292 (351)
+.++++++++++.+++ .|+.+... ++-|+.++.+++.+.++++.++ |+ ..+.+.+| .|....
T Consensus 75 -g~~~~~i~~~i~~l~~--~g~~v~i~~~v~~~~n~n~~~~~~~~~~~~~~~g~~~~~~l~~~-~p~g~~~~~~l~~~y~ 150 (182)
T 3can_A 75 -DVPNELILKNIRRVAE--ADFPYYIRIPLIEGVNADEKNIKLSAEFLASLPRHPEIINLLPY-HDIGKGKHAKLGSIYN 150 (182)
T ss_dssp -SSCSHHHHHHHHHHHH--TTCCEEEEEEECBTTTCSHHHHHHHHHHHHHSSSCCSEEEEEEC-CC--------------
T ss_pred -CCCHHHHHHHHHHHHh--CCCeEEEEEEEECCCCCCHHHHHHHHHHHHhCcCccceEEEecC-cccCHHHHHHhCCcCc
Confidence 4457999999999998 78765444 4556678999999999999999 98 78887544 462211
Q ss_pred ccccCCCCHHH--HHHHHHHHHhcCccee
Q 018731 293 LTVKEYVTPEK--FDFWKAYGESIGFRYV 319 (351)
Q Consensus 293 ~~~~~~v~~~e--~~~~~~~~~~~G~~~~ 319 (351)
+......++++ +.++.+.+++.|+...
T Consensus 151 ~~~~~~~~~e~~~l~~~~~~~~~~g~~~~ 179 (182)
T 3can_A 151 PKGYKMQTPSEEVQQQCIQILTDYGLKAT 179 (182)
T ss_dssp ----CCBCCCHHHHHHHHHHHHHTTCCEE
T ss_pred ccCCCCCCHHHHHHHHHHHHHHHcCCceE
Confidence 00112345566 8899999998888643
No 13
>4fhd_A Spore photoproduct lyase; partial TIM-barrel, DNA repair, damaged DNA; HET: EEM 0TT; 2.00A {Geobacillus thermodenitrificans} PDB: 4fhc_A* 4fhg_A* 4fhe_A* 4fhf_A*
Probab=98.28 E-value=2.3e-06 Score=80.83 Aligned_cols=162 Identities=12% Similarity=0.113 Sum_probs=94.7
Q ss_pred EeeccCCCCCCcCcccCCCCC--C-C--CCCchhHHHHHHH-HHhCCCc-EEEEeccCCCCCCC-CcHHHHHHHHHHHHH
Q 018731 107 MLLGDTCTRGCRFCAVKTSRN--P-A--PPDPMEPENTAKA-IASWGVD-YIVLTSVDRDDIPD-GGSGHFARTVKAMKK 178 (351)
Q Consensus 107 i~~s~gC~~~C~FC~~~~~~~--~-~--~~~~eei~~~~~~-~~~~G~~-~I~ltgg~~~~l~~-~~~~~~~~li~~ik~ 178 (351)
++...||+++|.||+.....+ + . ....+++++.++. +.+.+.+ ..+-+|.+.|.++- .......++++.+.+
T Consensus 111 ln~y~GC~~~C~YCYl~~~~~~~~~I~v~vN~~eiL~~l~~~l~~~~~~~~~i~~g~~TDpyp~E~~~~ltr~~le~l~~ 190 (368)
T 4fhd_A 111 IPLATGCMGHCHYCYLQTTLGSKPYIRVYVNLDDIFAQAQKYINERAPEITRFEAACTSDIVGIDHLTHSLKKAIEFIGA 190 (368)
T ss_dssp CCSEEBCSCCCTTCTHHHHTTTCCSEEEECCHHHHHHHHHHHHHHHTTSCEEEESCSSBCHHHHHTTTCHHHHHHHHHHH
T ss_pred eCCccCCCCCCceEeccccCCCCCeEEEecCHHHHHHHHHHHHhhcCCCceEEEEEcCCCcchhhHHHhHHHHHHHHHHh
Confidence 567999999999998765322 1 1 1334666655543 3334444 33344444333431 111234566776666
Q ss_pred hCCCcEEEEeecCCCCCHHHHHHHHHcCCCeeecchhchHHHHhhhcCCCCCHHHHHHHHHHHHHhCCCCeEEEeeeeeC
Q 018731 179 QKPDIMVECLTSDFRGDLRAVETLVHSGLDVFAHNIETVKRLQRIVRDPRAGYEQSLEVLKHAKLSKKGLITKSSIMLGL 258 (351)
Q Consensus 179 ~~p~i~i~~~~~~~~~~~e~l~~L~~aG~~~i~~~ies~~~~~~~~r~~~~~~~~~l~~i~~~~~~~~Gi~v~~~~IvGl 258 (351)
. ++..+++.|-....+ .+..+...|.-.|.+++.+ +++.+.+-....+.++++++++.+.+ +|+.|...+.-=+
T Consensus 191 ~-~~~~v~i~TKs~lid--~L~~l~~~~~v~V~~Sitt-~~l~r~~EP~aps~~~RL~Ai~~l~~--aGipv~v~iaPIi 264 (368)
T 4fhd_A 191 T-DYGRLRFVTKYEHVD--HLLDARHNGKTRFRFSINS-RYVINHFEPGTSSFDGRLAAARKVAG--AGYKLGFVVAPIY 264 (368)
T ss_dssp C-SSEEEEEEESCCCCG--GGTTCCCTTCEEEEEEECC-HHHHHHHCTTSCCHHHHHHHHHHHHH--TTCEEEEEEEEEC
T ss_pred C-CCceEEEEeCCcCHH--HHHhcCcCCceEEEEEEcC-HHHHHHcCCCCCCHHHHHHHHHHHHH--CCCeEEEEEeCcC
Confidence 4 455676666433222 2333444455556666655 44444443224589999999999999 9999877774434
Q ss_pred -CCCH-HHHHHHHHHHHh
Q 018731 259 -GESD-DDLKEAMADLRS 274 (351)
Q Consensus 259 -gEt~-e~~~~~l~~l~~ 274 (351)
++++ ++..+.++.+.+
T Consensus 265 P~~~~~e~y~~lle~l~~ 282 (368)
T 4fhd_A 265 RHEGWERGYFELFQELAR 282 (368)
T ss_dssp CCTTHHHHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHH
Confidence 5655 577777775544
No 14
>2cw6_A Hydroxymethylglutaryl-COA lyase, mitochondrial; HMG-COA lyase, ketogenic enzyme; HET: 3HG; 2.10A {Homo sapiens} PDB: 3mp3_A* 3mp4_A 3mp5_A*
Probab=97.90 E-value=0.00017 Score=66.47 Aligned_cols=145 Identities=18% Similarity=0.229 Sum_probs=101.0
Q ss_pred CCCchhHHHHHHHHHhCCCcEEEEeccCCCC-CCCCcHHHHHHHHHHHHHhCCCcEEEEeecCCCCCHHHHHHHHHcCCC
Q 018731 130 PPDPMEPENTAKAIASWGVDYIVLTSVDRDD-IPDGGSGHFARTVKAMKKQKPDIMVECLTSDFRGDLRAVETLVHSGLD 208 (351)
Q Consensus 130 ~~~~eei~~~~~~~~~~G~~~I~ltgg~~~~-l~~~~~~~~~~li~~ik~~~p~i~i~~~~~~~~~~~e~l~~L~~aG~~ 208 (351)
.++.++.+++++.+.+.|++.|-++++..+. .+. .....++++.+++ .+++.+.++.+ +.+.++...++|++
T Consensus 23 ~~~~e~k~~i~~~L~~~Gv~~IE~g~~~~~~~~p~--~~d~~~~~~~~~~-~~~~~~~~l~~----~~~~i~~a~~ag~~ 95 (298)
T 2cw6_A 23 IVSTPVKIKLIDMLSEAGLSVIETTSFVSPKWVPQ--MGDHTEVLKGIQK-FPGINYPVLTP----NLKGFEAAVAAGAK 95 (298)
T ss_dssp CCCHHHHHHHHHHHHHTTCSEECCEECCCTTTCGG--GTTHHHHHHHSCC-CTTCBCCEECC----SHHHHHHHHHTTCS
T ss_pred CCCHHHHHHHHHHHHHcCcCEEEECCCcCcccccc--cCCHHHHHHHHhh-CCCCEEEEEcC----CHHhHHHHHHCCCC
Confidence 4678899999999999999999887654321 121 1233456666655 45665554442 57889999999999
Q ss_pred eeecchhchHHH-Hhhhc-CCCCCHHHHHHHHHHHHHhCCCCeEEEeeeeeCC------CCHHHHHHHHHHHHhCCCCEE
Q 018731 209 VFAHNIETVKRL-QRIVR-DPRAGYEQSLEVLKHAKLSKKGLITKSSIMLGLG------ESDDDLKEAMADLRSIDVDIL 280 (351)
Q Consensus 209 ~i~~~ies~~~~-~~~~r-~~~~~~~~~l~~i~~~~~~~~Gi~v~~~~IvGlg------Et~e~~~~~l~~l~~lg~d~i 280 (351)
.|.+..-+.+.. .+.++ .....++...+.++.+++ .|+.+..++++-+| -+.+.+.+.++.+.++|++.+
T Consensus 96 ~v~i~~~~sd~~~~~~~~~~~~e~l~~~~~~i~~a~~--~G~~v~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~Ga~~i 173 (298)
T 2cw6_A 96 EVVIFGAASELFTKKNINCSIEESFQRFDAILKAAQS--ANISVRGYVSCALGCPYEGKISPAKVAEVTKKFYSMGCYEI 173 (298)
T ss_dssp EEEEEEESCHHHHHHHHSCCHHHHHHHHHHHHHHHHH--TTCEEEEEEETTTCBTTTBSCCHHHHHHHHHHHHHTTCSEE
T ss_pred EEEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHH--CCCeEEEEEEEEeeCCcCCCCCHHHHHHHHHHHHHcCCCEE
Confidence 998865443332 23333 112356677778888899 99999888875442 368899999999999999988
Q ss_pred eee
Q 018731 281 TLG 283 (351)
Q Consensus 281 ~i~ 283 (351)
.+.
T Consensus 174 ~l~ 176 (298)
T 2cw6_A 174 SLG 176 (298)
T ss_dssp EEE
T ss_pred Eec
Confidence 873
No 15
>1ydo_A HMG-COA lyase; TIM-barrel protein, structural genomics, PSI, protein struct initiative, northeast structural genomics consortium, NESG,; 2.71A {Bacillus subtilis subsp}
Probab=97.67 E-value=0.0028 Score=58.52 Aligned_cols=141 Identities=14% Similarity=0.162 Sum_probs=99.6
Q ss_pred CCCchhHHHHHHHHHhCCCcEEEEeccCCC-CCCCCcHHHHHHHHHHHHHhCCCcEEEEeecCCCCCHHHHHHHHHcCCC
Q 018731 130 PPDPMEPENTAKAIASWGVDYIVLTSVDRD-DIPDGGSGHFARTVKAMKKQKPDIMVECLTSDFRGDLRAVETLVHSGLD 208 (351)
Q Consensus 130 ~~~~eei~~~~~~~~~~G~~~I~ltgg~~~-~l~~~~~~~~~~li~~ik~~~p~i~i~~~~~~~~~~~e~l~~L~~aG~~ 208 (351)
.++.++.+++++.+.+.|++.|-+++...+ ..+. .....++++.+++. ++..+.++.+ +.+-++...++|++
T Consensus 24 ~~~~e~k~~i~~~L~~~Gv~~IE~g~~~~~~~~p~--~~d~~~~~~~~~~~-~~~~~~~l~~----~~~~i~~a~~~g~~ 96 (307)
T 1ydo_A 24 WIATEDKITWINQLSRTGLSYIEITSFVHPKWIPA--LRDAIDVAKGIDRE-KGVTYAALVP----NQRGLENALEGGIN 96 (307)
T ss_dssp CCCHHHHHHHHHHHHTTTCSEEEEEECSCTTTCGG--GTTHHHHHHHSCCC-TTCEEEEECC----SHHHHHHHHHHTCS
T ss_pred CCCHHHHHHHHHHHHHcCCCEEEECCCcCcccccc--cCCHHHHHHHhhhc-CCCeEEEEeC----CHHhHHHHHhCCcC
Confidence 467789999999999999999988764322 1221 11233556666554 6777776654 56789999999999
Q ss_pred eeecchhchHHH-HhhhcCCCCCH----HHHHHHHHHHHHhCCCCeEEEeeeeeCC------CCHHHHHHHHHHHHhCCC
Q 018731 209 VFAHNIETVKRL-QRIVRDPRAGY----EQSLEVLKHAKLSKKGLITKSSIMLGLG------ESDDDLKEAMADLRSIDV 277 (351)
Q Consensus 209 ~i~~~ies~~~~-~~~~r~~~~~~----~~~l~~i~~~~~~~~Gi~v~~~~IvGlg------Et~e~~~~~l~~l~~lg~ 277 (351)
.|.+..-+.+.. .+.+ +.+. +...+.++.+++ .|+.+..+++.-+| -+.+.+.+.++.+.++|+
T Consensus 97 ~v~i~~~~sd~~~~~~l---~~s~~e~l~~~~~~v~~ak~--~G~~v~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~Ga 171 (307)
T 1ydo_A 97 EACVFMSASETHNRKNI---NKSTSESLHILKQVNNDAQK--ANLTTRAYLSTVFGCPYEKDVPIEQVIRLSEALFEFGI 171 (307)
T ss_dssp EEEEEEESSHHHHHTTT---CSCHHHHHHHHHHHHHHHHH--TTCEEEEEEECTTCBTTTBCCCHHHHHHHHHHHHHHTC
T ss_pred EEEEEeecCHHHHHHHh---CCCHHHHHHHHHHHHHHHHH--CCCEEEEEEEEEecCCcCCCCCHHHHHHHHHHHHhcCC
Confidence 998765443332 2222 2344 556777888888 99998888776553 467889999999999999
Q ss_pred CEEee
Q 018731 278 DILTL 282 (351)
Q Consensus 278 d~i~i 282 (351)
+.+.+
T Consensus 172 ~~i~l 176 (307)
T 1ydo_A 172 SELSL 176 (307)
T ss_dssp SCEEE
T ss_pred CEEEE
Confidence 98877
No 16
>1ydn_A Hydroxymethylglutaryl-COA lyase; TIM-barrel protein, structural genomics, PSI, protein struct initiative; 2.30A {Brucella melitensis}
Probab=97.66 E-value=0.0011 Score=60.83 Aligned_cols=144 Identities=13% Similarity=0.143 Sum_probs=99.2
Q ss_pred CCchhHHHHHHHHHhCCCcEEEEeccCCCCC-CCCcHHHHHHHHHHHHHhCCCcEEEEeecCCCCCHHHHHHHHHcCCCe
Q 018731 131 PDPMEPENTAKAIASWGVDYIVLTSVDRDDI-PDGGSGHFARTVKAMKKQKPDIMVECLTSDFRGDLRAVETLVHSGLDV 209 (351)
Q Consensus 131 ~~~eei~~~~~~~~~~G~~~I~ltgg~~~~l-~~~~~~~~~~li~~ik~~~p~i~i~~~~~~~~~~~e~l~~L~~aG~~~ 209 (351)
.+.++..++++.+.+.|++.|-+++...+.+ + ......++++.+++. +++.+.++.+ +.+.++...++|++.
T Consensus 23 ~~~e~k~~i~~~L~~~Gv~~IE~g~~~~~~~~p--~~~~~~e~~~~i~~~-~~~~v~~l~~----n~~~i~~a~~~G~~~ 95 (295)
T 1ydn_A 23 VPTADKIALINRLSDCGYARIEATSFVSPKWVP--QLADSREVMAGIRRA-DGVRYSVLVP----NMKGYEAAAAAHADE 95 (295)
T ss_dssp CCHHHHHHHHHHHTTTTCSEEEEEECSCTTTCG--GGTTHHHHHHHSCCC-SSSEEEEECS----SHHHHHHHHHTTCSE
T ss_pred cCHHHHHHHHHHHHHcCcCEEEEccCcCccccc--cccCHHHHHHHHHhC-CCCEEEEEeC----CHHHHHHHHHCCCCE
Confidence 6778999999999999999998865332211 1 112345777777664 6778766553 578999999999999
Q ss_pred eecchhchHHHH-hhhc-CCCCCHHHHHHHHHHHHHhCCCCeEEEeee--eeC----CCCHHHHHHHHHHHHhCCCCEEe
Q 018731 210 FAHNIETVKRLQ-RIVR-DPRAGYEQSLEVLKHAKLSKKGLITKSSIM--LGL----GESDDDLKEAMADLRSIDVDILT 281 (351)
Q Consensus 210 i~~~ies~~~~~-~~~r-~~~~~~~~~l~~i~~~~~~~~Gi~v~~~~I--vGl----gEt~e~~~~~l~~l~~lg~d~i~ 281 (351)
|.+.+-+.+... ..++ .....++...+.++.+++ .|+.|.+.+. +|. .-+.+++.+.++.+.++|++.+.
T Consensus 96 V~i~~~~S~~h~~~~~~~~~~e~~~~~~~~v~~a~~--~G~~V~~~l~~~~~~e~~~~~~~~~~~~~~~~~~~~G~d~i~ 173 (295)
T 1ydn_A 96 IAVFISASEGFSKANINCTIAESIERLSPVIGAAIN--DGLAIRGYVSCVVECPYDGPVTPQAVASVTEQLFSLGCHEVS 173 (295)
T ss_dssp EEEEEESCHHHHHHHTSSCHHHHHHHHHHHHHHHHH--TTCEEEEEEECSSEETTTEECCHHHHHHHHHHHHHHTCSEEE
T ss_pred EEEEEecCHHHHHHHcCCCHHHHHHHHHHHHHHHHH--cCCeEEEEEEEEecCCcCCCCCHHHHHHHHHHHHhcCCCEEE
Confidence 987653333322 2121 111244555566888899 9999886665 332 24688899999999999999988
Q ss_pred ee
Q 018731 282 LG 283 (351)
Q Consensus 282 i~ 283 (351)
+.
T Consensus 174 l~ 175 (295)
T 1ydn_A 174 LG 175 (295)
T ss_dssp EE
T ss_pred ec
Confidence 84
No 17
>2ftp_A Hydroxymethylglutaryl-COA lyase; structural genomics, PSI, protein structure initiativ midwest center for structural genomics, MCSG; 2.40A {Pseudomonas aeruginosa}
Probab=97.43 E-value=0.0021 Score=59.18 Aligned_cols=145 Identities=19% Similarity=0.285 Sum_probs=98.4
Q ss_pred CCCchhHHHHHHHHHhCCCcEEEEeccCCC-CCCCCcHHHHHHHHHHHHHhCCCcEEEEeecCCCCCHHHHHHHHHcCCC
Q 018731 130 PPDPMEPENTAKAIASWGVDYIVLTSVDRD-DIPDGGSGHFARTVKAMKKQKPDIMVECLTSDFRGDLRAVETLVHSGLD 208 (351)
Q Consensus 130 ~~~~eei~~~~~~~~~~G~~~I~ltgg~~~-~l~~~~~~~~~~li~~ik~~~p~i~i~~~~~~~~~~~e~l~~L~~aG~~ 208 (351)
..+.++..++++.+.+.|++.|-+++...+ ..+. .....++++.+.+. +++.+.++.+ +.+.++...++|++
T Consensus 26 ~~~~e~k~~i~~~L~~~Gv~~IE~g~~~~~~~~~~--~~d~~~~~~~~~~~-~~~~~~~l~~----~~~~i~~a~~aG~~ 98 (302)
T 2ftp_A 26 PIEVADKIRLVDDLSAAGLDYIEVGSFVSPKWVPQ--MAGSAEVFAGIRQR-PGVTYAALAP----NLKGFEAALESGVK 98 (302)
T ss_dssp CCCHHHHHHHHHHHHHTTCSEEEEEECSCTTTCGG--GTTHHHHHHHSCCC-TTSEEEEECC----SHHHHHHHHHTTCC
T ss_pred CCCHHHHHHHHHHHHHcCcCEEEECCCcCcccccc--ccCHHHHHHHhhhc-CCCEEEEEeC----CHHHHHHHHhCCcC
Confidence 467788999999999999999988654321 1221 12334556666543 6777766553 67899999999999
Q ss_pred eeecchhchHHH-Hhhhc-CCCCCHHHHHHHHHHHHHhCCCCeEEEeeeeeCC------CCHHHHHHHHHHHHhCCCCEE
Q 018731 209 VFAHNIETVKRL-QRIVR-DPRAGYEQSLEVLKHAKLSKKGLITKSSIMLGLG------ESDDDLKEAMADLRSIDVDIL 280 (351)
Q Consensus 209 ~i~~~ies~~~~-~~~~r-~~~~~~~~~l~~i~~~~~~~~Gi~v~~~~IvGlg------Et~e~~~~~l~~l~~lg~d~i 280 (351)
.|.+..-+.+-. .+.++ ......+...+.++.+++ .|+.|...+..-+| -+.+.+.+.++.+.+.|+|.+
T Consensus 99 ~v~i~~~~s~~~~~~~~~~s~ee~l~~~~~~v~~a~~--~G~~V~~~l~~~~~~e~~~~~~~~~~~~~~~~~~~~G~d~i 176 (302)
T 2ftp_A 99 EVAVFAAASEAFSQRNINCSIKDSLERFVPVLEAARQ--HQVRVRGYISCVLGCPYDGDVDPRQVAWVARELQQMGCYEV 176 (302)
T ss_dssp EEEEEEESCHHHHHHHHSSCHHHHHHHHHHHHHHHHH--TTCEEEEEEECTTCBTTTBCCCHHHHHHHHHHHHHTTCSEE
T ss_pred EEEEEEecCHHHHHHHhCCCHHHHHHHHHHHHHHHHH--CCCeEEEEEEEEeeCCcCCCCCHHHHHHHHHHHHHcCCCEE
Confidence 987654333322 23332 012244556667788888 99998877765442 367888899999999999988
Q ss_pred eee
Q 018731 281 TLG 283 (351)
Q Consensus 281 ~i~ 283 (351)
.+.
T Consensus 177 ~l~ 179 (302)
T 2ftp_A 177 SLG 179 (302)
T ss_dssp EEE
T ss_pred EEe
Confidence 873
No 18
>3ble_A Citramalate synthase from leptospira interrogans; TIM barrel, licmsn, substrate specificity, acyltransferase, amino-acid biosynthesis; 2.00A {Leptospira interrogans} PDB: 3blf_A 3bli_A*
Probab=97.13 E-value=0.009 Score=55.82 Aligned_cols=144 Identities=17% Similarity=0.164 Sum_probs=95.0
Q ss_pred CCCchhHHHHHH-HHHhCCCcEEEEeccCCCCCCCCcHHHHHHHHHHHHH--hCCCcEEEEeecCCCCCHHHHHHHHHcC
Q 018731 130 PPDPMEPENTAK-AIASWGVDYIVLTSVDRDDIPDGGSGHFARTVKAMKK--QKPDIMVECLTSDFRGDLRAVETLVHSG 206 (351)
Q Consensus 130 ~~~~eei~~~~~-~~~~~G~~~I~ltgg~~~~l~~~~~~~~~~li~~ik~--~~p~i~i~~~~~~~~~~~e~l~~L~~aG 206 (351)
..+.++.+++++ .+.+.|++.|-+++... ...+++.+.++.+.... ..++..+.++.+.. ..++...++|
T Consensus 37 ~~~~~~k~~i~~~~L~~~Gv~~IE~g~~~~---~~~~~~~v~~~~~~~~~~~~~~~~~i~~l~~~~----~~i~~a~~~g 109 (337)
T 3ble_A 37 SFSTSEKLNIAKFLLQKLNVDRVEIASARV---SKGELETVQKIMEWAATEQLTERIEILGFVDGN----KTVDWIKDSG 109 (337)
T ss_dssp CCCHHHHHHHHHHHHHTTCCSEEEEEETTS---CTTHHHHHHHHHHHHHHTTCGGGEEEEEESSTT----HHHHHHHHHT
T ss_pred CcCHHHHHHHHHHHHHHcCCCEEEEeCCCC---ChhHHHHHHHHHhhhhhhccCCCCeEEEEccch----hhHHHHHHCC
Confidence 366788899999 99999999998865432 11122333333322111 34566777666532 3789999999
Q ss_pred CCeeecchhchHHH-Hhhhc-CCCCCHHHHHHHHHHHHHhCCCCeEEEeeee---eCCCCHHHHHHHHHHHHhCCCCEEe
Q 018731 207 LDVFAHNIETVKRL-QRIVR-DPRAGYEQSLEVLKHAKLSKKGLITKSSIML---GLGESDDDLKEAMADLRSIDVDILT 281 (351)
Q Consensus 207 ~~~i~~~ies~~~~-~~~~r-~~~~~~~~~l~~i~~~~~~~~Gi~v~~~~Iv---GlgEt~e~~~~~l~~l~~lg~d~i~ 281 (351)
++.|.+...+.+.. .+.++ .+....+...+.++.+++ .|+.+..++.. +.-.+.+.+.+.++.+.++|++.+.
T Consensus 110 ~~~v~i~~~~s~~~~~~~~~~s~~e~l~~~~~~v~~ak~--~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ga~~i~ 187 (337)
T 3ble_A 110 AKVLNLLTKGSLHHLEKQLGKTPKEFFTDVSFVIEYAIK--SGLKINVYLEDWSNGFRNSPDYVKSLVEHLSKEHIERIF 187 (337)
T ss_dssp CCEEEEEEECSHHHHHHHTCCCHHHHHHHHHHHHHHHHH--TTCEEEEEEETHHHHHHHCHHHHHHHHHHHHTSCCSEEE
T ss_pred CCEEEEEEecCHHHHHHHhCCCHHHHHHHHHHHHHHHHH--CCCEEEEEEEECCCCCcCCHHHHHHHHHHHHHcCCCEEE
Confidence 99998765544432 23333 011244566677788888 99998777665 3344678889999999999999888
Q ss_pred e
Q 018731 282 L 282 (351)
Q Consensus 282 i 282 (351)
+
T Consensus 188 l 188 (337)
T 3ble_A 188 L 188 (337)
T ss_dssp E
T ss_pred E
Confidence 7
No 19
>3ivs_A Homocitrate synthase, mitochondrial; TIM barrel, metalloprotein, transferase, claisen condensatio acid biosynthesis; 2.24A {Schizosaccharomyces pombe} PDB: 3ivt_A* 3ivu_A* 3mi3_A*
Probab=97.09 E-value=0.039 Score=52.96 Aligned_cols=141 Identities=21% Similarity=0.168 Sum_probs=96.2
Q ss_pred CCCchhHHHHHHHHHhCCCcEEEEeccCCCCCCCCcHHHHHHHHHHHHHhCCCcEEEEeecCCCCCHHHHHHHHHcCCCe
Q 018731 130 PPDPMEPENTAKAIASWGVDYIVLTSVDRDDIPDGGSGHFARTVKAMKKQKPDIMVECLTSDFRGDLRAVETLVHSGLDV 209 (351)
Q Consensus 130 ~~~~eei~~~~~~~~~~G~~~I~ltgg~~~~l~~~~~~~~~~li~~ik~~~p~i~i~~~~~~~~~~~e~l~~L~~aG~~~ 209 (351)
.++.++-+++++.+.+.|++.|=++ .|. .. +.-.+.++.+.+......+..... -+.+-++...++|++.
T Consensus 57 ~~s~eeKl~Ia~~L~~~Gv~~IEvG--~P~-as----p~d~~~~~~i~~~~~~~~v~~~~r---~~~~di~~A~~aG~~~ 126 (423)
T 3ivs_A 57 FFDTEKKIQIAKALDNFGVDYIELT--SPV-AS----EQSRQDCEAICKLGLKCKILTHIR---CHMDDARVAVETGVDG 126 (423)
T ss_dssp CCCHHHHHHHHHHHHHHTCSEEEEC--CTT-SC----HHHHHHHHHHHTSCCSSEEEEEEE---SCHHHHHHHHHTTCSE
T ss_pred CcCHHHHHHHHHHHHHcCCCEEEEe--ecc-cC----HHHHHHHHHHHhcCCCCEEEEeec---cChhhHHHHHHcCCCE
Confidence 4677889999999999999998884 332 22 344566667776533344432211 2556789999999999
Q ss_pred eecchhchHHHH-hhhc-CCCCCHHHHHHHHHHHHHhCCCCeEEEeeeeeCCCCHHHHHHHHHHHHhCCCCEEee
Q 018731 210 FAHNIETVKRLQ-RIVR-DPRAGYEQSLEVLKHAKLSKKGLITKSSIMLGLGESDDDLKEAMADLRSIDVDILTL 282 (351)
Q Consensus 210 i~~~ies~~~~~-~~~r-~~~~~~~~~l~~i~~~~~~~~Gi~v~~~~IvGlgEt~e~~~~~l~~l~~lg~d~i~i 282 (351)
|.+.+-+.+-.. ..++ .+....+...+.++.+++ .|+.|..+..-++.-+.+.+.+.++.+.+.|++.+.+
T Consensus 127 V~i~~s~Sd~~~~~~l~~s~~e~l~~~~~~v~~ak~--~G~~V~~~~eda~r~d~~~~~~v~~~~~~~Ga~~i~l 199 (423)
T 3ivs_A 127 VDVVIGTSQYLRKYSHGKDMTYIIDSATEVINFVKS--KGIEVRFSSEDSFRSDLVDLLSLYKAVDKIGVNRVGI 199 (423)
T ss_dssp EEEEEEC-------------CHHHHHHHHHHHHHHT--TTCEEEEEEESGGGSCHHHHHHHHHHHHHHCCSEEEE
T ss_pred EEEEeeccHHHHHHHcCCCHHHHHHHHHHHHHHHHH--CCCEEEEEEccCcCCCHHHHHHHHHHHHHhCCCcccc
Confidence 887655543322 1111 112235677788999999 9999888877777778899999999999999998777
No 20
>3eeg_A 2-isopropylmalate synthase; 11106D, beta barrel, PSI-II, structural genomics, protein structure initiative; 2.78A {Cytophaga hutchinsonii atcc 33406}
Probab=96.99 E-value=0.043 Score=50.90 Aligned_cols=141 Identities=15% Similarity=0.066 Sum_probs=94.6
Q ss_pred CCCchhHHHHHHHHHhCCCcEEEEeccCCCCCCCCcHHHHHHHHHHHHHhCCCcEEEEeecCCCCCHHHHHHHHHc----
Q 018731 130 PPDPMEPENTAKAIASWGVDYIVLTSVDRDDIPDGGSGHFARTVKAMKKQKPDIMVECLTSDFRGDLRAVETLVHS---- 205 (351)
Q Consensus 130 ~~~~eei~~~~~~~~~~G~~~I~ltgg~~~~l~~~~~~~~~~li~~ik~~~p~i~i~~~~~~~~~~~e~l~~L~~a---- 205 (351)
.++.++.+++++.+.+.|++.|=++. | ... ...+ +.++.+.+..++..+.++... ..+-++.-.++
T Consensus 24 ~~~~~~Kl~ia~~L~~~Gv~~IE~g~--p-~~~---~~d~-e~v~~i~~~~~~~~i~~l~r~---~~~~i~~a~~al~~a 93 (325)
T 3eeg_A 24 QLNTEEKIIVAKALDELGVDVIEAGF--P-VSS---PGDF-NSVVEITKAVTRPTICALTRA---KEADINIAGEALRFA 93 (325)
T ss_dssp -CCTTHHHHHHHHHHHHTCSEEEEEC--T-TSC---HHHH-HHHHHHHHHCCSSEEEEECCS---CHHHHHHHHHHHTTC
T ss_pred CCCHHHHHHHHHHHHHcCCCEEEEeC--C-CCC---HhHH-HHHHHHHHhCCCCEEEEeecC---CHHHHHHHHHhhccc
Confidence 36678889999999999999987743 2 122 2334 445667666678888776532 34444544444
Q ss_pred CCCeeecchhchHHHH--hhhcCCCCCHHHHHHHHHHHHHhCCCCeEEEeeeeeCCCCHHHHHHHHHHHHhCCCCEEee
Q 018731 206 GLDVFAHNIETVKRLQ--RIVRDPRAGYEQSLEVLKHAKLSKKGLITKSSIMLGLGESDDDLKEAMADLRSIDVDILTL 282 (351)
Q Consensus 206 G~~~i~~~ies~~~~~--~~~r~~~~~~~~~l~~i~~~~~~~~Gi~v~~~~IvGlgEt~e~~~~~l~~l~~lg~d~i~i 282 (351)
|++.|.+..-+.+-.. +..+.+....+...+.++.+++ .|+.+..+...+.--+.+.+.+.++.+.+.|++.+.+
T Consensus 94 g~~~v~i~~s~Sd~~~~~~l~~s~~e~l~~~~~~v~~a~~--~g~~v~f~~~d~~~~~~~~~~~~~~~~~~~G~~~i~l 170 (325)
T 3eeg_A 94 KRSRIHTGIGSSDIHIEHKLRSTRENILEMAVAAVKQAKK--VVHEVEFFCEDAGRADQAFLARMVEAVIEAGADVVNI 170 (325)
T ss_dssp SSEEEEEEEECSHHHHC----CCCTTGGGTTHHHHHHHHT--TSSEEEEEEETGGGSCHHHHHHHHHHHHHHTCSEEEC
T ss_pred CCCEEEEEecccHHHHHHHhCCCHHHHHHHHHHHHHHHHH--CCCEEEEEccccccchHHHHHHHHHHHHhcCCCEEEe
Confidence 9999876544333321 2112234567778888999999 9998776666554566788889999999999998776
No 21
>1nvm_A HOA, 4-hydroxy-2-oxovalerate aldolase; sequestered tunnel, substrate channeling; HET: NAD; 1.70A {Pseudomonas SP} SCOP: a.5.7.1 c.1.10.5
Probab=96.97 E-value=0.019 Score=53.79 Aligned_cols=137 Identities=14% Similarity=0.101 Sum_probs=96.7
Q ss_pred CCCchhHHHHHHHHHhCCCcEEEEe-----ccCCCCCCCCcHHHHHHHHHHHHHhCCCcEEEEe-ecCCCCCHHHHHHHH
Q 018731 130 PPDPMEPENTAKAIASWGVDYIVLT-----SVDRDDIPDGGSGHFARTVKAMKKQKPDIMVECL-TSDFRGDLRAVETLV 203 (351)
Q Consensus 130 ~~~~eei~~~~~~~~~~G~~~I~lt-----gg~~~~l~~~~~~~~~~li~~ik~~~p~i~i~~~-~~~~~~~~e~l~~L~ 203 (351)
.+++++..++++.+.+.|++.|=++ ++..+.. ......-.+.++.+++..|++.+.++ .++. ..++.++...
T Consensus 26 ~~~~e~k~~i~~~L~~~Gvd~IEvG~~~g~p~ssp~~-g~~~~~~~e~l~~i~~~~~~~~i~~l~~p~~-~~~~~i~~a~ 103 (345)
T 1nvm_A 26 QYTLDDVRAIARALDKAKVDSIEVAHGDGLQGSSFNY-GFGRHTDLEYIEAVAGEISHAQIATLLLPGI-GSVHDLKNAY 103 (345)
T ss_dssp CCCHHHHHHHHHHHHHHTCSEEECSCTTSTTCCBTTT-BCCSSCHHHHHHHHHTTCSSSEEEEEECBTT-BCHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHcCCCEEEEecCCCCCCCCCcc-cCCCCCHHHHHHHHHhhCCCCEEEEEecCCc-ccHHHHHHHH
Confidence 4677889999999999999999884 2211111 00012235667777776678888776 4432 3678999999
Q ss_pred HcCCCeeecchhchHHHHhhhcCCCCCHHHHHHHHHHHHHhCCCCeEEEeeeeeCCCCHHHHHHHHHHHHhCCCCEEee
Q 018731 204 HSGLDVFAHNIETVKRLQRIVRDPRAGYEQSLEVLKHAKLSKKGLITKSSIMLGLGESDDDLKEAMADLRSIDVDILTL 282 (351)
Q Consensus 204 ~aG~~~i~~~ies~~~~~~~~r~~~~~~~~~l~~i~~~~~~~~Gi~v~~~~IvGlgEt~e~~~~~l~~l~~lg~d~i~i 282 (351)
++|++.+.+.. .. ...+...+.++.+++ .|+.+...+.-...-+.+.+.+.++.+.+.|++.+.+
T Consensus 104 ~aGvd~v~I~~-~~-----------s~~~~~~~~i~~ak~--~G~~v~~~~~~a~~~~~e~~~~ia~~~~~~Ga~~i~l 168 (345)
T 1nvm_A 104 QAGARVVRVAT-HC-----------TEADVSKQHIEYARN--LGMDTVGFLMMSHMIPAEKLAEQGKLMESYGATCIYM 168 (345)
T ss_dssp HHTCCEEEEEE-ET-----------TCGGGGHHHHHHHHH--HTCEEEEEEESTTSSCHHHHHHHHHHHHHHTCSEEEE
T ss_pred hCCcCEEEEEE-ec-----------cHHHHHHHHHHHHHH--CCCEEEEEEEeCCCCCHHHHHHHHHHHHHCCCCEEEE
Confidence 99999986642 11 122345667778888 8998877776556677888999999999999998777
No 22
>3ewb_X 2-isopropylmalate synthase; LEUA, structural genomics, unknown function, amino-acid biosynthesis; 2.10A {Listeria monocytogenes str}
Probab=96.92 E-value=0.13 Score=46.83 Aligned_cols=141 Identities=19% Similarity=0.083 Sum_probs=91.8
Q ss_pred CCCchhHHHHHHHHHhCCCcEEEEeccCCCCCCCCcHHHHHHHHHHHHHhCCCcEEEEeecCCCCC-HHHHHHHHHcCCC
Q 018731 130 PPDPMEPENTAKAIASWGVDYIVLTSVDRDDIPDGGSGHFARTVKAMKKQKPDIMVECLTSDFRGD-LRAVETLVHSGLD 208 (351)
Q Consensus 130 ~~~~eei~~~~~~~~~~G~~~I~ltgg~~~~l~~~~~~~~~~li~~ik~~~p~i~i~~~~~~~~~~-~e~l~~L~~aG~~ 208 (351)
.++.++.+++++.+.+.|++.|=+++.. .. ...+ +.++.+.+..++..+.++.+....+ +..++.++++|++
T Consensus 23 ~~~~~~K~~i~~~L~~~Gv~~IE~g~p~---~~---~~d~-e~v~~i~~~~~~~~i~~l~~~~~~di~~a~~~~~~ag~~ 95 (293)
T 3ewb_X 23 NFDVKEKIQIALQLEKLGIDVIEAGFPI---SS---PGDF-ECVKAIAKAIKHCSVTGLARCVEGDIDRAEEALKDAVSP 95 (293)
T ss_dssp CCCHHHHHHHHHHHHHHTCSEEEEECGG---GC---HHHH-HHHHHHHHHCCSSEEEEEEESSHHHHHHHHHHHTTCSSE
T ss_pred CCCHHHHHHHHHHHHHcCCCEEEEeCCC---CC---ccHH-HHHHHHHHhcCCCEEEEEecCCHHHHHHHHHHHhhcCCC
Confidence 3667889999999999999999875421 11 1233 3355666666778887766532101 2234444557999
Q ss_pred eeecchhchHHHH-hhhcCCCCCHHH----HHHHHHHHHHhCCCCeEEEeeeeeCCCCHHHHHHHHHHHHhCCCCEEee
Q 018731 209 VFAHNIETVKRLQ-RIVRDPRAGYEQ----SLEVLKHAKLSKKGLITKSSIMLGLGESDDDLKEAMADLRSIDVDILTL 282 (351)
Q Consensus 209 ~i~~~ies~~~~~-~~~r~~~~~~~~----~l~~i~~~~~~~~Gi~v~~~~IvGlgEt~e~~~~~l~~l~~lg~d~i~i 282 (351)
.|.+-+-+.+-.. +.+ +.+.++ ..+.++.+++ .|+.+..+...+..-+.+.+.+.++.+.++|++.+.+
T Consensus 96 ~v~i~~~~Sd~~~~~nl---~~s~~e~l~~~~~~v~~a~~--~g~~v~~~~~d~~~~~~~~~~~~~~~~~~~G~~~i~l 169 (293)
T 3ewb_X 96 QIHIFLATSDVHMEYKL---KMSRAEVLASIKHHISYARQ--KFDVVQFSPEDATRSDRAFLIEAVQTAIDAGATVINI 169 (293)
T ss_dssp EEEEEEECSHHHHHHTT---CCCHHHHHHHHHHHHHHHHT--TCSCEEEEEETGGGSCHHHHHHHHHHHHHTTCCEEEE
T ss_pred EEEEEecCcHHHHHHHh---CCCHHHHHHHHHHHHHHHHh--CCCEEEEEeccCCCCCHHHHHHHHHHHHHcCCCEEEe
Confidence 9887554444322 222 345554 4555666777 8988776665444456788899999999999998877
No 23
>2ztj_A Homocitrate synthase; (beta/alpha)8 TIM barrel, substrate complex, amino-acid BIOS lysine biosynthesis, transferase; HET: AKG; 1.80A {Thermus thermophilus} PDB: 2ztk_A* 2zyf_A* 3a9i_A*
Probab=96.79 E-value=0.1 Score=49.40 Aligned_cols=137 Identities=18% Similarity=0.165 Sum_probs=96.4
Q ss_pred CCCchhHHHHHHHHHhCCCcEEEEeccCCCCCCCCcHHHHHHHHHHHHHhCCCcEEEEeecCCCCCHHHHHHHHHcCCCe
Q 018731 130 PPDPMEPENTAKAIASWGVDYIVLTSVDRDDIPDGGSGHFARTVKAMKKQKPDIMVECLTSDFRGDLRAVETLVHSGLDV 209 (351)
Q Consensus 130 ~~~~eei~~~~~~~~~~G~~~I~ltgg~~~~l~~~~~~~~~~li~~ik~~~p~i~i~~~~~~~~~~~e~l~~L~~aG~~~ 209 (351)
.++.++.+++++.+.+.|++.|=+++ |. .. +...+.++.+++..+...+.++.. ...+-++...++|++.
T Consensus 21 ~~~~~~k~~ia~~L~~~Gv~~IE~g~--p~-~~----~~~~~~~~~i~~~~~~~~v~~~~r---~~~~di~~a~~~g~~~ 90 (382)
T 2ztj_A 21 NFSTQDKVEIAKALDEFGIEYIEVTT--PV-AS----PQSRKDAEVLASLGLKAKVVTHIQ---CRLDAAKVAVETGVQG 90 (382)
T ss_dssp CCCHHHHHHHHHHHHHHTCSEEEECC--TT-SC----HHHHHHHHHHHTSCCSSEEEEEEE---SCHHHHHHHHHTTCSE
T ss_pred CcCHHHHHHHHHHHHHcCcCEEEEcC--Cc-CC----HHHHHHHHHHHhcCCCcEEEEEcc---cChhhHHHHHHcCCCE
Confidence 46778999999999999999998854 32 22 455677888887655555544322 1456689999999999
Q ss_pred eecchhchHHHHhhhcCCCCCH----HHHHHHHHHHHHhCCC--CeEEEeeeeeCCCCHHHHHHHHHHHHhCCCCEEee
Q 018731 210 FAHNIETVKRLQRIVRDPRAGY----EQSLEVLKHAKLSKKG--LITKSSIMLGLGESDDDLKEAMADLRSIDVDILTL 282 (351)
Q Consensus 210 i~~~ies~~~~~~~~r~~~~~~----~~~l~~i~~~~~~~~G--i~v~~~~IvGlgEt~e~~~~~l~~l~~lg~d~i~i 282 (351)
|.+..-+.+-..+.+ +.+. +...+.++.+++ .| +.+..++.-+..-+.+.+.+.++.+.+. ++.+.+
T Consensus 91 v~i~~~~s~~~~~~~---~~s~~e~l~~~~~~v~~ak~--~g~~~~v~~~~ed~~~~~~~~~~~~~~~~~~~-a~~i~l 163 (382)
T 2ztj_A 91 IDLLFGTSKYLRAPH---GRDIPRIIEEAKEVIAYIRE--AAPHVEVRFSAEDTFRSEEQDLLAVYEAVAPY-VDRVGL 163 (382)
T ss_dssp EEEEECC-----------CCCHHHHHHHHHHHHHHHHH--HCTTSEEEEEETTTTTSCHHHHHHHHHHHGGG-CSEEEE
T ss_pred EEEEeccCHHHHHHh---CCCHHHHHHHHHHHHHHHHH--cCCCEEEEEEEEeCCCCCHHHHHHHHHHHHHh-cCEEEe
Confidence 877553333222222 3354 456777888888 78 8888887776677889999999999999 998777
No 24
>3rmj_A 2-isopropylmalate synthase; LEUA, truncation, neisseria MENI TIM barrel, catalytic domain, dimer, leucine biosynthesis, ketoisovalerate; 1.95A {Neisseria meningitidis}
Probab=96.51 E-value=0.17 Score=47.71 Aligned_cols=138 Identities=18% Similarity=0.107 Sum_probs=91.3
Q ss_pred CCCchhHHHHHHHHHhCCCcEEEEeccCCCCCCCCcHHHHHHHHHHHHHhCCCcEEEEeecCCCCCHHHH----HHHHHc
Q 018731 130 PPDPMEPENTAKAIASWGVDYIVLTSVDRDDIPDGGSGHFARTVKAMKKQKPDIMVECLTSDFRGDLRAV----ETLVHS 205 (351)
Q Consensus 130 ~~~~eei~~~~~~~~~~G~~~I~ltgg~~~~l~~~~~~~~~~li~~ik~~~p~i~i~~~~~~~~~~~e~l----~~L~~a 205 (351)
.++.++.+++++.+.+.|++.|=.+. | ... ...+ +.++.+.+..++..+.++... +.+-+ +.++.+
T Consensus 30 ~~~~~~Kl~ia~~L~~~Gv~~IE~g~--p-~~~---~~d~-e~v~~i~~~~~~~~i~~l~r~---~~~di~~a~~al~~a 99 (370)
T 3rmj_A 30 AMTKEEKIRVARQLEKLGVDIIEAGF--A-AAS---PGDF-EAVNAIAKTITKSTVCSLSRA---IERDIRQAGEAVAPA 99 (370)
T ss_dssp CCCHHHHHHHHHHHHHHTCSEEEEEE--G-GGC---HHHH-HHHHHHHTTCSSSEEEEEEES---SHHHHHHHHHHHTTS
T ss_pred CcCHHHHHHHHHHHHHcCCCEEEEeC--C-CCC---HHHH-HHHHHHHHhCCCCeEEEEecC---CHHHHHHHHHHHhhC
Confidence 46778999999999999999887643 2 122 1233 344556655667777766542 33333 444559
Q ss_pred CCCeeecchhchHHH-HhhhcCCCCCHHHHH----HHHHHHHHhCCCCeEEEeeeeeCCCCHHHHHHHHHHHHhCCCCEE
Q 018731 206 GLDVFAHNIETVKRL-QRIVRDPRAGYEQSL----EVLKHAKLSKKGLITKSSIMLGLGESDDDLKEAMADLRSIDVDIL 280 (351)
Q Consensus 206 G~~~i~~~ies~~~~-~~~~r~~~~~~~~~l----~~i~~~~~~~~Gi~v~~~~IvGlgEt~e~~~~~l~~l~~lg~d~i 280 (351)
|+++|.+..-+.+-. ...+ +.+.++.+ +.++.+++ .|..+..+...+.--+.+.+.+.++.+.+.|++.+
T Consensus 100 g~~~v~if~~~Sd~h~~~~l---~~s~~e~l~~~~~~v~~a~~--~g~~v~~~~ed~~r~~~~~~~~~~~~~~~~Ga~~i 174 (370)
T 3rmj_A 100 PKKRIHTFIATSPIHMEYKL---KMKPKQVIEAAVKAVKIARE--YTDDVEFSCEDALRSEIDFLAEICGAVIEAGATTI 174 (370)
T ss_dssp SSEEEEEEEECSHHHHHHTT---CCCHHHHHHHHHHHHHHHTT--TCSCEEEEEETGGGSCHHHHHHHHHHHHHHTCCEE
T ss_pred CCCEEEEEecCcHHHHHHHh---CCCHHHHHHHHHHHHHHHHH--cCCEEEEecCCCCccCHHHHHHHHHHHHHcCCCEE
Confidence 999998765544432 2333 23555544 45667777 88877666655555667888999999999999988
Q ss_pred ee
Q 018731 281 TL 282 (351)
Q Consensus 281 ~i 282 (351)
.+
T Consensus 175 ~l 176 (370)
T 3rmj_A 175 NI 176 (370)
T ss_dssp EE
T ss_pred Ee
Confidence 77
No 25
>2nx9_A Oxaloacetate decarboxylase 2, subunit alpha; carboxyltransferase structure, B enzymes, Zn2+ binding site, TIM-barrel fold, lyase; 1.70A {Vibrio cholerae}
Probab=96.34 E-value=0.061 Score=52.31 Aligned_cols=135 Identities=14% Similarity=0.085 Sum_probs=92.6
Q ss_pred CCCchhHHHHHHHHHhCCCcEEEEeccCCC-----CCCCCcHHHHHHHHHHHHHhCCCcEEEEeec--CC--CC------
Q 018731 130 PPDPMEPENTAKAIASWGVDYIVLTSVDRD-----DIPDGGSGHFARTVKAMKKQKPDIMVECLTS--DF--RG------ 194 (351)
Q Consensus 130 ~~~~eei~~~~~~~~~~G~~~I~ltgg~~~-----~l~~~~~~~~~~li~~ik~~~p~i~i~~~~~--~~--~~------ 194 (351)
.++.++.+++++.+.+.|+..|-.+++... .+.. .-.+.++.+++..|+..+.++.. +. ..
T Consensus 26 ~~~~~dkl~Ia~~L~~~Gv~~IE~g~~atF~~~~r~~~~----d~~e~l~~i~~~~~~~~l~~l~R~~N~~G~~~~~ddv 101 (464)
T 2nx9_A 26 RLRIDDMLPIAQQLDQIGYWSLECWGGATFDSCIRFLGE----DPWQRLRLLKQAMPNTPLQMLLRGQNLLGYRHYADDV 101 (464)
T ss_dssp CCCGGGTGGGHHHHHTSCCSEEEEEETTHHHHHHHTTCC----CHHHHHHHHHHHCSSSCEEEEECGGGTTSSSCCCHHH
T ss_pred CCCHHHHHHHHHHHHHcCCCEEEeCcCccccchhhccCC----CHHHHHHHHHHhCCCCeEEEEeccccccCcccccchh
Confidence 466788888899999999999988764310 0111 12345566666567776665542 11 11
Q ss_pred CHHHHHHHHHcCCCeeecchhchHHHHhhhcCCCCCHHHHHHHHHHHHHhCCCCeEEEee--eeeCCCCHHHHHHHHHHH
Q 018731 195 DLRAVETLVHSGLDVFAHNIETVKRLQRIVRDPRAGYEQSLEVLKHAKLSKKGLITKSSI--MLGLGESDDDLKEAMADL 272 (351)
Q Consensus 195 ~~e~l~~L~~aG~~~i~~~ies~~~~~~~~r~~~~~~~~~l~~i~~~~~~~~Gi~v~~~~--IvGlgEt~e~~~~~l~~l 272 (351)
.+..++...++|++.|.+-. ...+.+...+.++.+++ .|..+..++ ..|...+.+.+.+.++.+
T Consensus 102 ~~~~v~~a~~~Gvd~i~if~------------~~sd~~ni~~~i~~ak~--~G~~v~~~i~~~~~~~~~~e~~~~~a~~l 167 (464)
T 2nx9_A 102 VDTFVERAVKNGMDVFRVFD------------AMNDVRNMQQALQAVKK--MGAHAQGTLCYTTSPVHNLQTWVDVAQQL 167 (464)
T ss_dssp HHHHHHHHHHTTCCEEEECC------------TTCCTHHHHHHHHHHHH--TTCEEEEEEECCCCTTCCHHHHHHHHHHH
T ss_pred hHHHHHHHHhCCcCEEEEEE------------ecCHHHHHHHHHHHHHH--CCCEEEEEEEeeeCCCCCHHHHHHHHHHH
Confidence 14678889999999886532 12233556678888998 899876555 445566889999999999
Q ss_pred HhCCCCEEee
Q 018731 273 RSIDVDILTL 282 (351)
Q Consensus 273 ~~lg~d~i~i 282 (351)
.+.|++.+.+
T Consensus 168 ~~~Gad~I~l 177 (464)
T 2nx9_A 168 AELGVDSIAL 177 (464)
T ss_dssp HHTTCSEEEE
T ss_pred HHCCCCEEEE
Confidence 9999998877
No 26
>1rqb_A Transcarboxylase 5S subunit; TIM-barrel, carbamylated lysine, transfera; HET: KCX; 1.90A {Propionibacterium freudenreichii subspshermanii} SCOP: a.5.7.2 c.1.10.5 PDB: 1rqe_A 1rqh_A* 1rr2_A* 1u5j_A* 1s3h_A*
Probab=96.16 E-value=0.067 Score=52.89 Aligned_cols=135 Identities=13% Similarity=0.065 Sum_probs=93.2
Q ss_pred CCCchhHHHHHHHHHhCCCcEEEEeccCC-----CCCCCCcHHHHHHHHHHHHHhCCCcEEEEeec--C--CC------C
Q 018731 130 PPDPMEPENTAKAIASWGVDYIVLTSVDR-----DDIPDGGSGHFARTVKAMKKQKPDIMVECLTS--D--FR------G 194 (351)
Q Consensus 130 ~~~~eei~~~~~~~~~~G~~~I~ltgg~~-----~~l~~~~~~~~~~li~~ik~~~p~i~i~~~~~--~--~~------~ 194 (351)
.++.++.+++++.+.+.|++.|=++++.. ..+.. .=.+.++.+++..|+..+.++.. + +. .
T Consensus 43 ~~~tedKl~Ia~~L~~~Gv~~IE~G~patF~~~~rfl~~----d~~e~lr~l~~~~~~~~l~~L~R~~N~~G~~~ypddv 118 (539)
T 1rqb_A 43 RMAMEDMVGACADIDAAGYWSVECWGGATYDSCIRFLNE----DPWERLRTFRKLMPNSRLQMLLRGQNLLGYRHYNDEV 118 (539)
T ss_dssp CCCGGGTGGGHHHHHHTTCSEEEEEETTHHHHHHHTSCC----CHHHHHHHHHHHCTTSCEEEEECGGGTTSSSCCCHHH
T ss_pred CCCHHHHHHHHHHHHHcCCCEEEeCcccccccchhccCC----CHHHHHHHHHHhCCCCEEEEEeccccccCcccCcccc
Confidence 46778888999999999999998876531 01111 12344556665567777766552 1 11 1
Q ss_pred CHHHHHHHHHcCCCeeecchhchHHHHhhhcCCCCCHHHHHHHHHHHHHhCCCCeEEEee--eeeCCCCHHHHHHHHHHH
Q 018731 195 DLRAVETLVHSGLDVFAHNIETVKRLQRIVRDPRAGYEQSLEVLKHAKLSKKGLITKSSI--MLGLGESDDDLKEAMADL 272 (351)
Q Consensus 195 ~~e~l~~L~~aG~~~i~~~ies~~~~~~~~r~~~~~~~~~l~~i~~~~~~~~Gi~v~~~~--IvGlgEt~e~~~~~l~~l 272 (351)
.+..++...++|++.|.+..- ..+.+...+.++.+++ .|..+...+ ..|..-+.+.+.+.++.+
T Consensus 119 ~~~~ve~a~~aGvd~vrIf~s------------~sd~~ni~~~i~~ak~--~G~~v~~~i~~~~~~~~~~e~~~~~a~~l 184 (539)
T 1rqb_A 119 VDRFVDKSAENGMDVFRVFDA------------MNDPRNMAHAMAAVKK--AGKHAQGTICYTISPVHTVEGYVKLAGQL 184 (539)
T ss_dssp HHHHHHHHHHTTCCEEEECCT------------TCCTHHHHHHHHHHHH--TTCEEEEEEECCCSTTCCHHHHHHHHHHH
T ss_pred cHHHHHHHHhCCCCEEEEEEe------------hhHHHHHHHHHHHHHH--CCCeEEEEEEeeeCCCCCHHHHHHHHHHH
Confidence 256789999999998865321 2233556788888888 899876555 445567889999999999
Q ss_pred HhCCCCEEee
Q 018731 273 RSIDVDILTL 282 (351)
Q Consensus 273 ~~lg~d~i~i 282 (351)
.++|++.+.+
T Consensus 185 ~~~Gad~I~L 194 (539)
T 1rqb_A 185 LDMGADSIAL 194 (539)
T ss_dssp HHTTCSEEEE
T ss_pred HHcCCCEEEe
Confidence 9999998777
No 27
>4e38_A Keto-hydroxyglutarate-aldolase/keto-deoxy-phospho aldolase; lyase; 1.64A {Vibrionales bacterium swat-3}
Probab=94.41 E-value=1.6 Score=38.26 Aligned_cols=112 Identities=11% Similarity=0.154 Sum_probs=78.8
Q ss_pred CCchhHHHHHHHHHhCCCcEEEEeccCCCCCCCCcHHHHHHHHHHHHHhCCCcEEEEeecCCCCCHHHHHHHHHcCCCee
Q 018731 131 PDPMEPENTAKAIASWGVDYIVLTSVDRDDIPDGGSGHFARTVKAMKKQKPDIMVECLTSDFRGDLRAVETLVHSGLDVF 210 (351)
Q Consensus 131 ~~~eei~~~~~~~~~~G~~~I~ltgg~~~~l~~~~~~~~~~li~~ik~~~p~i~i~~~~~~~~~~~e~l~~L~~aG~~~i 210 (351)
.++++..+.++.+.+.|++-|-++--++ .-.+.++.+++.+|++.+.+-| .++.+.++...++|.+.|
T Consensus 43 ~~~~~a~~~a~al~~gGi~~iEvt~~t~---------~a~e~I~~l~~~~~~~~iGaGT---Vlt~~~a~~Ai~AGA~fI 110 (232)
T 4e38_A 43 DNAEDIIPLGKVLAENGLPAAEITFRSD---------AAVEAIRLLRQAQPEMLIGAGT---ILNGEQALAAKEAGATFV 110 (232)
T ss_dssp SSGGGHHHHHHHHHHTTCCEEEEETTST---------THHHHHHHHHHHCTTCEEEEEC---CCSHHHHHHHHHHTCSEE
T ss_pred CCHHHHHHHHHHHHHCCCCEEEEeCCCC---------CHHHHHHHHHHhCCCCEEeECC---cCCHHHHHHHHHcCCCEE
Confidence 3578889999999999999988864432 2357888888888887665532 358999999999999987
Q ss_pred ecchhchHHHHhhhcCCCCCHHHHHHHHHHHHHhCCCCeEEEeeeeeCCCCHHHHHHHHHHHHhCCCCEEeee
Q 018731 211 AHNIETVKRLQRIVRDPRAGYEQSLEVLKHAKLSKKGLITKSSIMLGLGESDDDLKEAMADLRSIDVDILTLG 283 (351)
Q Consensus 211 ~~~ies~~~~~~~~r~~~~~~~~~l~~i~~~~~~~~Gi~v~~~~IvGlgEt~e~~~~~l~~l~~lg~d~i~i~ 283 (351)
.. |..+ .+.++.+++ .|+.+ |.|. -|..|+... .++|+|.+.++
T Consensus 111 vs--------------P~~~----~~vi~~~~~--~gi~~----ipGv-~TptEi~~A----~~~Gad~vK~F 154 (232)
T 4e38_A 111 VS--------------PGFN----PNTVRACQE--IGIDI----VPGV-NNPSTVEAA----LEMGLTTLKFF 154 (232)
T ss_dssp EC--------------SSCC----HHHHHHHHH--HTCEE----ECEE-CSHHHHHHH----HHTTCCEEEEC
T ss_pred Ee--------------CCCC----HHHHHHHHH--cCCCE----EcCC-CCHHHHHHH----HHcCCCEEEEC
Confidence 32 2322 244455666 67764 3343 277776555 46899988884
No 28
>2yci_X 5-methyltetrahydrofolate corrinoid/iron sulfur PR methyltransferase; 1.78A {Carboxydothermus hydrogenoformans} PDB: 2ycj_A* 2yck_X*
Probab=94.33 E-value=1.3 Score=39.66 Aligned_cols=135 Identities=14% Similarity=0.175 Sum_probs=89.3
Q ss_pred CCchhHHHHHHHHHhCCCcEEEEeccCCCCCCCCcHHHHHHHHHHHHHhCCCcEEEEeecCCCCCHHHHHHHHHc--CCC
Q 018731 131 PDPMEPENTAKAIASWGVDYIVLTSVDRDDIPDGGSGHFARTVKAMKKQKPDIMVECLTSDFRGDLRAVETLVHS--GLD 208 (351)
Q Consensus 131 ~~~eei~~~~~~~~~~G~~~I~ltgg~~~~l~~~~~~~~~~li~~ik~~~p~i~i~~~~~~~~~~~e~l~~L~~a--G~~ 208 (351)
.+.+.+.+.+++..+.|.+-|-+.|+.. ...+.+++..+++.+++.. ++.+.+=| .+.+.++.-.++ |.+
T Consensus 31 ~~~~~a~~~a~~~v~~GAdiIDIg~~s~---~~eE~~rv~~vi~~l~~~~-~~pisIDT----~~~~v~~aal~a~~Ga~ 102 (271)
T 2yci_X 31 KDPRPIQEWARRQAEKGAHYLDVNTGPT---ADDPVRVMEWLVKTIQEVV-DLPCCLDS----TNPDAIEAGLKVHRGHA 102 (271)
T ss_dssp TCCHHHHHHHHHHHHTTCSEEEEECCSC---SSCHHHHHHHHHHHHHHHC-CCCEEEEC----SCHHHHHHHHHHCCSCC
T ss_pred CCHHHHHHHHHHHHHCCCCEEEEcCCcC---chhHHHHHHHHHHHHHHhC-CCeEEEeC----CCHHHHHHHHHhCCCCC
Confidence 4568888899999999999998877653 2235788999999998864 55554422 278899998888 988
Q ss_pred eee-cchhc--hHHHHhh---h-----------cCCCCCHH----HHHHHHHHHHHhCCCCe---EEEeeeeeC-CCCHH
Q 018731 209 VFA-HNIET--VKRLQRI---V-----------RDPRAGYE----QSLEVLKHAKLSKKGLI---TKSSIMLGL-GESDD 263 (351)
Q Consensus 209 ~i~-~~ies--~~~~~~~---~-----------r~~~~~~~----~~l~~i~~~~~~~~Gi~---v~~~~IvGl-gEt~e 263 (351)
-|+ ++.+. ++++... . ++...+.+ ...+.++.+.+ .|+. +-.|-.+|+ |.+.+
T Consensus 103 iINdvs~~~d~~~~~~~~~a~~~~~vv~m~~d~~G~p~t~~~~~~~l~~~~~~a~~--~Gi~~~~IilDPg~gfigk~~~ 180 (271)
T 2yci_X 103 MINSTSADQWKMDIFFPMAKKYEAAIIGLTMNEKGVPKDANDRSQLAMELVANADA--HGIPMTELYIDPLILPVNVAQE 180 (271)
T ss_dssp EEEEECSCHHHHHHHHHHHHHHTCEEEEESCBTTBCCCSHHHHHHHHHHHHHHHHH--TTCCGGGEEEECCCCCTTTSTH
T ss_pred EEEECCCCccccHHHHHHHHHcCCCEEEEecCCCCCCCCHHHHHHHHHHHHHHHHH--CCCCcccEEEecCCCccccCHH
Confidence 886 44432 1222111 0 00112433 44455666677 8996 788888888 88887
Q ss_pred HHHHHHHHHHhC
Q 018731 264 DLKEAMADLRSI 275 (351)
Q Consensus 264 ~~~~~l~~l~~l 275 (351)
+-.++++.++.+
T Consensus 181 ~~~~~l~~l~~~ 192 (271)
T 2yci_X 181 HAVEVLETIRQI 192 (271)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 665666555544
No 29
>1eye_A DHPS 1, dihydropteroate synthase I; alpha-beta barrel, transferase; HET: PMM; 1.70A {Mycobacterium tuberculosis H37RV} SCOP: c.1.21.1
Probab=94.13 E-value=2.2 Score=38.35 Aligned_cols=137 Identities=15% Similarity=0.120 Sum_probs=81.2
Q ss_pred CCchhHHHHHHHHHhCCCcEEEEeccC-CCC---C-CCCcHHHHHHHHHHHHHhCCCcEEEEeecCCCCCHHHHHHHHHc
Q 018731 131 PDPMEPENTAKAIASWGVDYIVLTSVD-RDD---I-PDGGSGHFARTVKAMKKQKPDIMVECLTSDFRGDLRAVETLVHS 205 (351)
Q Consensus 131 ~~~eei~~~~~~~~~~G~~~I~ltgg~-~~~---l-~~~~~~~~~~li~~ik~~~p~i~i~~~~~~~~~~~e~l~~L~~a 205 (351)
.+++++.+.++...+.|.+-|-+.|.. .+. . ...+.+++..+++.+++. ++.|.+=| .+.+.++.-.++
T Consensus 26 ~~~~~a~~~a~~~v~~GAdiIDIGgestrpga~~v~~~eE~~Rv~pvi~~l~~~--~~piSIDT----~~~~va~aAl~a 99 (280)
T 1eye_A 26 LDLDDAVKHGLAMAAAGAGIVDVGGESSRPGATRVDPAVETSRVIPVVKELAAQ--GITVSIDT----MRADVARAALQN 99 (280)
T ss_dssp CSHHHHHHHHHHHHHTTCSEEEEECC--------------HHHHHHHHHHHHHT--TCCEEEEC----SCHHHHHHHHHT
T ss_pred CCHHHHHHHHHHHHHCCCCEEEECCccCCCCCCCCCHHHHHHHHHHHHHHhhcC--CCEEEEeC----CCHHHHHHHHHc
Confidence 467888999999999999999887622 110 1 134467888888888764 54444322 256777777777
Q ss_pred CCCeeec-chhc-hHHHHhh------------hcC-CC--------C-C-----HHHHHHHHHHHHHhCCCCe---EEEe
Q 018731 206 GLDVFAH-NIET-VKRLQRI------------VRD-PR--------A-G-----YEQSLEVLKHAKLSKKGLI---TKSS 253 (351)
Q Consensus 206 G~~~i~~-~ies-~~~~~~~------------~r~-~~--------~-~-----~~~~l~~i~~~~~~~~Gi~---v~~~ 253 (351)
|.+.|+- +-.. .+++.+. +++ |. + + .+...+.++.+.+ .|+. +-.+
T Consensus 100 Ga~iINdvsg~~~d~~m~~~~a~~~~~vVlmh~~G~p~tm~~~~~~y~dv~~~v~~~l~~~i~~a~~--~Gi~~~~IilD 177 (280)
T 1eye_A 100 GAQMVNDVSGGRADPAMGPLLAEADVPWVLMHWRAVSADTPHVPVRYGNVVAEVRADLLASVADAVA--AGVDPARLVLD 177 (280)
T ss_dssp TCCEEEETTTTSSCTTHHHHHHHHTCCEEEECCCCSCTTCTTSCCCCSSHHHHHHHHHHHHHHHHHH--TTCCGGGEEEE
T ss_pred CCCEEEECCCCCCCHHHHHHHHHhCCeEEEEcCCCCCcchhhcCcchhHHHHHHHHHHHHHHHHHHH--cCCChhhEEEE
Confidence 7777652 2111 1111100 000 00 0 1 4445567777788 8986 6777
Q ss_pred eeeeCCCCHHHHHHHHHHHHhC
Q 018731 254 IMLGLGESDDDLKEAMADLRSI 275 (351)
Q Consensus 254 ~IvGlgEt~e~~~~~l~~l~~l 275 (351)
--+||+.|.++-.++++.+.++
T Consensus 178 Pg~Gf~k~~~~n~~ll~~l~~~ 199 (280)
T 1eye_A 178 PGLGFAKTAQHNWAILHALPEL 199 (280)
T ss_dssp CCTTSSCCHHHHHHHHHTHHHH
T ss_pred CCCCcccCHHHHHHHHHHHHHh
Confidence 7778888887777766666543
No 30
>1aj0_A DHPS, dihydropteroate synthase; antibiotic, resistance, transferase, folate, biosynthesis; HET: PH2 SAN; 2.00A {Escherichia coli} SCOP: c.1.21.1 PDB: 1aj2_A* 1ajz_A 3tyz_A* 3tyu_A* 3tzf_A* 3tzn_A
Probab=93.78 E-value=2.3 Score=38.33 Aligned_cols=138 Identities=10% Similarity=0.112 Sum_probs=86.4
Q ss_pred CCchhHHHHHHHHHhCCCcEEEEec-cCCCCC---C-CCcHHHHHHHHHHHHHhCCCcEEEEeecCCCCCHHHHHHHHHc
Q 018731 131 PDPMEPENTAKAIASWGVDYIVLTS-VDRDDI---P-DGGSGHFARTVKAMKKQKPDIMVECLTSDFRGDLRAVETLVHS 205 (351)
Q Consensus 131 ~~~eei~~~~~~~~~~G~~~I~ltg-g~~~~l---~-~~~~~~~~~li~~ik~~~p~i~i~~~~~~~~~~~e~l~~L~~a 205 (351)
.+++++.+.+++..+.|++-|-+.| +.++.- + ..+.+++..+++.+++.. ++.|.+=| .+.+.++.-.++
T Consensus 35 ~~~~~a~~~a~~~v~~GAdiIDIGgestrPga~~v~~~eE~~rv~pvi~~l~~~~-~~piSIDT----~~~~va~aAl~a 109 (282)
T 1aj0_A 35 NSLIDAVKHANLMINAGATIIDVGGESTRPGAAEVSVEEELQRVIPVVEAIAQRF-EVWISVDT----SKPEVIRESAKV 109 (282)
T ss_dssp THHHHHHHHHHHHHHHTCSEEEEESSCCSTTCCCCCHHHHHHHHHHHHHHHHHHC-CCEEEEEC----CCHHHHHHHHHT
T ss_pred CCHHHHHHHHHHHHHCCCCEEEECCCcCCCCCCcCCHHHHHHHHHHHHHHHHhhc-CCeEEEeC----CCHHHHHHHHHc
Confidence 4568888889999999999998876 332211 1 234567788888887764 55554422 266777777777
Q ss_pred CCCeeec-chhchHHHHhh------------hcCCCCC--------------HHHHHHHHHHHHHhCCCCe---EEEeee
Q 018731 206 GLDVFAH-NIETVKRLQRI------------VRDPRAG--------------YEQSLEVLKHAKLSKKGLI---TKSSIM 255 (351)
Q Consensus 206 G~~~i~~-~ies~~~~~~~------------~r~~~~~--------------~~~~l~~i~~~~~~~~Gi~---v~~~~I 255 (351)
|.+.|+- +-+..+++.+. +++...+ .+...+.++.+.+ .|+. +-.|--
T Consensus 110 Ga~iINdvsg~~d~~~~~~~a~~~~~vVlmh~~G~p~tm~~~~~y~d~~~ev~~~l~~~i~~a~~--~Gi~~~~IilDPg 187 (282)
T 1aj0_A 110 GAHIINDIRSLSEPGALEAAAETGLPVCLMHMQGNPKTMQEAPKYDDVFAEVNRYFIEQIARCEQ--AGIAKEKLLLDPG 187 (282)
T ss_dssp TCCEEEETTTTCSTTHHHHHHHHTCCEEEECCSSCTTCCSCCCCCSCHHHHHHHHHHHHHHHHHH--TTCCGGGEEEECC
T ss_pred CCCEEEECCCCCCHHHHHHHHHhCCeEEEEccCCCCccccccCccchHHHHHHHHHHHHHHHHHH--cCCChhhEEEeCC
Confidence 8777752 21111111100 0100011 5556667778888 8996 777776
Q ss_pred eeCCCCHHHHHHHHHHHHhC
Q 018731 256 LGLGESDDDLKEAMADLRSI 275 (351)
Q Consensus 256 vGlgEt~e~~~~~l~~l~~l 275 (351)
+|++.|.++-.++++.+.++
T Consensus 188 ~gf~k~~~~n~~ll~~l~~~ 207 (282)
T 1aj0_A 188 FGFGKNLSHNYSLLARLAEF 207 (282)
T ss_dssp TTSSCCHHHHHHHHHTGGGG
T ss_pred CCcccCHHHHHHHHHHHHHH
Confidence 77888888777777777654
No 31
>3lab_A Putative KDPG (2-keto-3-deoxy-6-phosphogluconate) aldolase; unknown function, aldolase superfamily, class I aldolase, KDPG aldolase domain; 1.84A {Oleispira antarctica} PDB: 3vcr_A
Probab=93.72 E-value=1.5 Score=37.91 Aligned_cols=116 Identities=18% Similarity=0.186 Sum_probs=78.2
Q ss_pred CCchhHHHHHHHHHhCCCcEEEEeccCCCCCCCCcHHHHHHHHHHHHHhCCCcEEEEeecCCCCCHHHHHHHHHcCCCee
Q 018731 131 PDPMEPENTAKAIASWGVDYIVLTSVDRDDIPDGGSGHFARTVKAMKKQKPDIMVECLTSDFRGDLRAVETLVHSGLDVF 210 (351)
Q Consensus 131 ~~~eei~~~~~~~~~~G~~~I~ltgg~~~~l~~~~~~~~~~li~~ik~~~p~i~i~~~~~~~~~~~e~l~~L~~aG~~~i 210 (351)
.++++....++.+.+.|++.|-+|--.+ .-.+.++.+++.+|+..|-+- ..++.+.++...++|.+.+
T Consensus 22 ~~~~~a~~~a~al~~gGi~~iEvt~~t~---------~a~~~I~~l~~~~p~~~IGAG---TVlt~~~a~~ai~AGA~fi 89 (217)
T 3lab_A 22 DDLVHAIPMAKALVAGGVHLLEVTLRTE---------AGLAAISAIKKAVPEAIVGAG---TVCTADDFQKAIDAGAQFI 89 (217)
T ss_dssp SCGGGHHHHHHHHHHTTCCEEEEETTST---------THHHHHHHHHHHCTTSEEEEE---CCCSHHHHHHHHHHTCSEE
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEeCCCc---------cHHHHHHHHHHHCCCCeEeec---cccCHHHHHHHHHcCCCEE
Confidence 4678899999999999999888864332 346788889988888776552 3458999999999999987
Q ss_pred ecchhchHHHHhhhcCCCCCHHHHHHHHHHHHHhCCCC--eEEEeeeeeCCCCHHHHHHHHHHHHhCCCCEEeee
Q 018731 211 AHNIETVKRLQRIVRDPRAGYEQSLEVLKHAKLSKKGL--ITKSSIMLGLGESDDDLKEAMADLRSIDVDILTLG 283 (351)
Q Consensus 211 ~~~ies~~~~~~~~r~~~~~~~~~l~~i~~~~~~~~Gi--~v~~~~IvGlgEt~e~~~~~l~~l~~lg~d~i~i~ 283 (351)
- . |..+. +.++.+++ .|+ .-..-+|.|. -|.+|+... .++|+|.+.++
T Consensus 90 v-------------s-P~~~~----evi~~~~~--~~v~~~~~~~~~PG~-~TptE~~~A----~~~Gad~vK~F 139 (217)
T 3lab_A 90 V-------------S-PGLTP----ELIEKAKQ--VKLDGQWQGVFLPGV-ATASEVMIA----AQAGITQLKCF 139 (217)
T ss_dssp E-------------E-SSCCH----HHHHHHHH--HHHHCSCCCEEEEEE-CSHHHHHHH----HHTTCCEEEET
T ss_pred E-------------e-CCCcH----HHHHHHHH--cCCCccCCCeEeCCC-CCHHHHHHH----HHcCCCEEEEC
Confidence 2 1 23222 34445555 454 0011244453 566766554 56888888774
No 32
>2vp8_A Dihydropteroate synthase 2; RV1207 transferase, folate biosynthesis, antibiotic resistance; 2.64A {Mycobacterium tuberculosis}
Probab=92.74 E-value=0.51 Score=43.40 Aligned_cols=138 Identities=11% Similarity=0.093 Sum_probs=77.6
Q ss_pred CCchhHHHHHHHHHhCCCcEEEEeccC--CC-CCC-CCcHHHHHHHHHHHHHhCCCcEEEEeecCCCCCHHHHHHHHHcC
Q 018731 131 PDPMEPENTAKAIASWGVDYIVLTSVD--RD-DIP-DGGSGHFARTVKAMKKQKPDIMVECLTSDFRGDLRAVETLVHSG 206 (351)
Q Consensus 131 ~~~eei~~~~~~~~~~G~~~I~ltgg~--~~-~l~-~~~~~~~~~li~~ik~~~p~i~i~~~~~~~~~~~e~l~~L~~aG 206 (351)
.+.+.+++.++++.+.|.+-|-+.|.. |. ..+ ..+.+++..+++.+++..|++.|.+=| .+.+.++.-.++|
T Consensus 62 ~~~~~a~~~A~~~v~~GAdIIDIGgeSTrPG~~v~~~eEl~Rv~pvI~~l~~~~~~vpISIDT----~~~~VaeaAl~aG 137 (318)
T 2vp8_A 62 FSDAAARDAVHRAVADGADVIDVGGVKAGPGERVDVDTEITRLVPFIEWLRGAYPDQLISVDT----WRAQVAKAACAAG 137 (318)
T ss_dssp --CHHHHHHHHHHHHTTCSEEEEC----------CHHHHHHHHHHHHHHHHHHSTTCEEEEEC----SCHHHHHHHHHHT
T ss_pred CCHHHHHHHHHHHHHCCCCEEEECCCcCCCCCCCCHHHHHHHHHHHHHHHHhhCCCCeEEEeC----CCHHHHHHHHHhC
Confidence 457888899999999999988886532 11 121 123456667788888876676665422 2566777777777
Q ss_pred CCeee-cchhchHHHHhh------------hcCC-CC------CH------------HHHHHHHHHHHHhCCCCe---EE
Q 018731 207 LDVFA-HNIETVKRLQRI------------VRDP-RA------GY------------EQSLEVLKHAKLSKKGLI---TK 251 (351)
Q Consensus 207 ~~~i~-~~ies~~~~~~~------------~r~~-~~------~~------------~~~l~~i~~~~~~~~Gi~---v~ 251 (351)
.+-|+ ++-+..+++.+. +++. .. .| +...+.++.+.+ .|+. +-
T Consensus 138 a~iINDVsg~~d~~m~~vaa~~g~~vVlmh~~G~~p~tmq~~~~y~~~~~dv~~ev~~~l~~~i~~a~~--aGI~~~~Ii 215 (318)
T 2vp8_A 138 ADLINDTWGGVDPAMPEVAAEFGAGLVCAHTGGALPRTRPFRVSYGTTTRGVVDAVISQVTAAAERAVA--AGVAREKVL 215 (318)
T ss_dssp CCEEEETTSSSSTTHHHHHHHHTCEEEEECC-------------CCSCHHHHHHHHHHHHHHHHHHHHH--TTCCGGGEE
T ss_pred CCEEEECCCCCchHHHHHHHHhCCCEEEECCCCCCccccccccccccccccHHHHHHHHHHHHHHHHHH--cCCChhhEE
Confidence 77664 111111111100 0000 00 11 334455777778 8995 67
Q ss_pred EeeeeeCCCCHHHHHHHHHHHHh
Q 018731 252 SSIMLGLGESDDDLKEAMADLRS 274 (351)
Q Consensus 252 ~~~IvGlgEt~e~~~~~l~~l~~ 274 (351)
.|=-+||+.|.++-.++++.+.+
T Consensus 216 lDPG~GF~Kt~~~nl~ll~~l~~ 238 (318)
T 2vp8_A 216 IDPAHDFGKNTFHGLLLLRHVAD 238 (318)
T ss_dssp EETTTTCCTTSHHHHHHHHTHHH
T ss_pred EcCCCCcccCHHHHHHHHHHHHH
Confidence 77677887777666666665554
No 33
>3tr9_A Dihydropteroate synthase; biosynthesis of cofactors, prosthetic groups, and carriers, transferase; HET: PT1; 1.90A {Coxiella burnetii}
Probab=92.59 E-value=2.7 Score=38.41 Aligned_cols=137 Identities=15% Similarity=0.132 Sum_probs=82.1
Q ss_pred CCchhHHHHHHHHHhCCCcEEEEeccC-CCCCC--------CCcHHHHHHHHHHHHHhCCCcEEEEeecCCCCCHHHHHH
Q 018731 131 PDPMEPENTAKAIASWGVDYIVLTSVD-RDDIP--------DGGSGHFARTVKAMKKQKPDIMVECLTSDFRGDLRAVET 201 (351)
Q Consensus 131 ~~~eei~~~~~~~~~~G~~~I~ltgg~-~~~l~--------~~~~~~~~~li~~ik~~~p~i~i~~~~~~~~~~~e~l~~ 201 (351)
.+++++.+.++++.+.|+.-|-+.|.. .+... ..+.+++..+++.+++.. ++.|.+=| .+.+.++.
T Consensus 46 ~~~~~al~~A~~~v~~GAdIIDIGgeSTrPga~~~~~~V~~~eE~~Rv~pvI~~l~~~~-~vpISIDT----~~~~Va~a 120 (314)
T 3tr9_A 46 LDLNSALRTAEKMVDEGADILDIGGEATNPFVDIKTDSPSTQIELDRLLPVIDAIKKRF-PQLISVDT----SRPRVMRE 120 (314)
T ss_dssp CSHHHHHHHHHHHHHTTCSEEEEECCCSCTTC-----CHHHHHHHHHHHHHHHHHHHHC-CSEEEEEC----SCHHHHHH
T ss_pred CCHHHHHHHHHHHHHCCCCEEEECCCCCCCCcccccCCCCHHHHHHHHHHHHHHHHhhC-CCeEEEeC----CCHHHHHH
Confidence 457888999999999999988886532 11111 112345777788887763 56665422 26788888
Q ss_pred HHHcCCCeee-cchhchHHHHhhh------------cCCCCC-------------HHHHHHHHHHHHHhCCCCe---EEE
Q 018731 202 LVHSGLDVFA-HNIETVKRLQRIV------------RDPRAG-------------YEQSLEVLKHAKLSKKGLI---TKS 252 (351)
Q Consensus 202 L~~aG~~~i~-~~ies~~~~~~~~------------r~~~~~-------------~~~~l~~i~~~~~~~~Gi~---v~~ 252 (351)
-.++|.+.|+ ++-...+++.+.+ ++...+ .+...+.++.+.+ .|+. +-.
T Consensus 121 Al~aGa~iINDVsg~~~~~m~~v~a~~g~~vVlMh~~G~P~tmq~~~~ydvv~ev~~~l~~~i~~a~~--~GI~~~~Iil 198 (314)
T 3tr9_A 121 AVNTGADMINDQRALQLDDALTTVSALKTPVCLMHFPSETRKPGSTTHFYFLQSVKKELQESIQRCKK--AGISEDRIII 198 (314)
T ss_dssp HHHHTCCEEEETTTTCSTTHHHHHHHHTCCEEEECCCCTTCCTTSSCHHHHHHHHHHHHHHHHHHHHH--TTCCGGGEEE
T ss_pred HHHcCCCEEEECCCCCchHHHHHHHHhCCeEEEECCCCCCcccccccccchHHHHHHHHHHHHHHHHH--cCCCHhHEEE
Confidence 8888888775 2222222221110 100011 3344556677777 8984 666
Q ss_pred eeeee---CCCCHHHHHHHHHHHHh
Q 018731 253 SIMLG---LGESDDDLKEAMADLRS 274 (351)
Q Consensus 253 ~~IvG---lgEt~e~~~~~l~~l~~ 274 (351)
|=-+| ||.|.++=.++++.+..
T Consensus 199 DPG~G~~~F~Kt~~~n~~lL~~l~~ 223 (314)
T 3tr9_A 199 DPGFGQGNYGKNVSENFYLLNKLPE 223 (314)
T ss_dssp ECCCCSGGGCCCHHHHHHHHHTTHH
T ss_pred eCCCCchhhcCCHHHHHHHHHHHHH
Confidence 66678 88888766666555543
No 34
>3fst_A 5,10-methylenetetrahydrofolate reductase; TIM barrel, flavin, amino-acid biosynthesis, FAD, flavoprotein, methionine biosynthesis, NAD; HET: FAD MRY; 1.65A {Escherichia coli k-12} PDB: 3fsu_A* 1zp3_A* 1zpt_A* 1zrq_A* 1zp4_A* 2fmn_A* 2fmo_A* 1b5t_A*
Probab=92.42 E-value=2.7 Score=38.28 Aligned_cols=120 Identities=15% Similarity=0.073 Sum_probs=72.0
Q ss_pred CCchhHHHHHHHHHhCCCcEEEEeccCCCCCCCCcHHHHHHHHHHHHHhCCCcEEEEe-ecCC---CCCH----HHHHHH
Q 018731 131 PDPMEPENTAKAIASWGVDYIVLTSVDRDDIPDGGSGHFARTVKAMKKQKPDIMVECL-TSDF---RGDL----RAVETL 202 (351)
Q Consensus 131 ~~~eei~~~~~~~~~~G~~~I~ltgg~~~~l~~~~~~~~~~li~~ik~~~p~i~i~~~-~~~~---~~~~----e~l~~L 202 (351)
.+.+++.+.+..+.+.|++.|....|+++.-.+++..+-.++++.|++. .++.|.+. -|.+ ..+. +.++.=
T Consensus 94 ~~~~~l~~~L~~~~~~GI~nILaLrGDpp~~~~~~~~~A~dLv~~ir~~-~~f~IgvA~yPE~Hp~a~~~~~d~~~Lk~K 172 (304)
T 3fst_A 94 ATPDELRTIARDYWNNGIRHIVALRGDLPPGSGKPEMYASDLVTLLKEV-ADFDISVAAYPEVHPEAKSAQADLLNLKRK 172 (304)
T ss_dssp SCHHHHHHHHHHHHHTTCCEEEEECCCCC------CCCHHHHHHHHHHH-CCCEEEEEECTTCCTTCSCHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHCCCCEEEEecCCCCCCCCCCCCCHHHHHHHHHHc-CCCeEEEEeCCCcCCCCCCHHHHHHHHHHH
Confidence 4578888888888999999998887876433222344567888888876 35555432 2221 1122 233333
Q ss_pred HHcCCCeeecchhchHHHHhhhcCCCCCHHHHHHHHHHHHHhCCCCeEEEeeeeeC-C-CCHHHHHHH
Q 018731 203 VHSGLDVFAHNIETVKRLQRIVRDPRAGYEQSLEVLKHAKLSKKGLITKSSIMLGL-G-ESDDDLKEA 268 (351)
Q Consensus 203 ~~aG~~~i~~~ies~~~~~~~~r~~~~~~~~~l~~i~~~~~~~~Gi~v~~~~IvGl-g-Et~e~~~~~ 268 (351)
.++|.+.+. +..-++.+...+.++.+++ .|+. .-++.|+ . .+...+...
T Consensus 173 vdAGAdf~i-------------TQ~ffD~~~~~~f~~~~r~--~Gi~--vPIi~GImPi~s~~~~~~~ 223 (304)
T 3fst_A 173 VDAGANRAI-------------TQFFFDVESYLRFRDRCVS--AGID--VEIIPGILPVSNFKQAKKL 223 (304)
T ss_dssp HHHTCCEEE-------------ECCCSCHHHHHHHHHHHHH--TTCC--SCEECEECCCSCHHHHHHH
T ss_pred HHcCCCEEE-------------eCccCCHHHHHHHHHHHHh--cCCC--CcEEEEecccCCHHHHHHH
Confidence 468888751 1235677777777878887 7764 3566666 2 445544443
No 35
>3inp_A D-ribulose-phosphate 3-epimerase; IDP02542, isomerase, struc genomics, center for structural genomics of infectious DISE csgid; 2.05A {Francisella tularensis subsp}
Probab=92.30 E-value=1.4 Score=38.93 Aligned_cols=151 Identities=17% Similarity=0.098 Sum_probs=84.2
Q ss_pred CCchhHHHHHHHHHhCCCcEEEE--eccC-CCCCCCCcHHHHHHHHHHHHHhCCCcE--EEEeecCCCCCHHHHHHHHHc
Q 018731 131 PDPMEPENTAKAIASWGVDYIVL--TSVD-RDDIPDGGSGHFARTVKAMKKQKPDIM--VECLTSDFRGDLRAVETLVHS 205 (351)
Q Consensus 131 ~~~eei~~~~~~~~~~G~~~I~l--tgg~-~~~l~~~~~~~~~~li~~ik~~~p~i~--i~~~~~~~~~~~e~l~~L~~a 205 (351)
.+...+.++++.+.+.|++.+.+ ..|. -+.+. .| .++++.+++..|+.. +.....+ .+..++.++++
T Consensus 37 aD~~~L~~~i~~l~~~G~d~lHvDVmDg~FVpnit-~G----~~~v~~lr~~~p~~~ldvHLmv~~---p~~~i~~~~~a 108 (246)
T 3inp_A 37 ADLARLGDDVKAVLAAGADNIHFDVMDNHYVPNLT-FG----PMVLKALRDYGITAGMDVHLMVKP---VDALIESFAKA 108 (246)
T ss_dssp SCGGGHHHHHHHHHHTTCCCEEEEEEBSSSSSCBC-CC----HHHHHHHHHHTCCSCEEEEEECSS---CHHHHHHHHHH
T ss_pred CChhhHHHHHHHHHHcCCCEEEEEecCCCcCcchh-cC----HHHHHHHHHhCCCCeEEEEEeeCC---HHHHHHHHHHc
Confidence 34556788888888889886544 3332 22232 12 356777777765543 3333332 35689999999
Q ss_pred CCCeeecchhchHHHHhhhcCCCCCHHHHHHHHHHHHHhCCCCeEEEeeeeeCCCCHHHHHHHHHHHHhCCCCEEeeecc
Q 018731 206 GLDVFAHNIETVKRLQRIVRDPRAGYEQSLEVLKHAKLSKKGLITKSSIMLGLGESDDDLKEAMADLRSIDVDILTLGQY 285 (351)
Q Consensus 206 G~~~i~~~ies~~~~~~~~r~~~~~~~~~l~~i~~~~~~~~Gi~v~~~~IvGlgEt~e~~~~~l~~l~~lg~d~i~i~~~ 285 (351)
|.|.|++..|+.+ +. .+.++.+++ .|+++... +-.+...+.+.+. .+ .+|.+-++ -
T Consensus 109 GAd~itvH~Ea~~-----------~~---~~~i~~ir~--~G~k~Gva--lnp~Tp~e~l~~~----l~-~vD~VlvM-s 164 (246)
T 3inp_A 109 GATSIVFHPEASE-----------HI---DRSLQLIKS--FGIQAGLA--LNPATGIDCLKYV----ES-NIDRVLIM-S 164 (246)
T ss_dssp TCSEEEECGGGCS-----------CH---HHHHHHHHT--TTSEEEEE--ECTTCCSGGGTTT----GG-GCSEEEEE-C
T ss_pred CCCEEEEccccch-----------hH---HHHHHHHHH--cCCeEEEE--ecCCCCHHHHHHH----Hh-cCCEEEEe-e
Confidence 9999999877632 22 345566777 89865443 3222223333222 22 47887775 3
Q ss_pred cCC-CCCcccccCCCCHHHHHHHHHHHHhcC
Q 018731 286 LQP-TPLHLTVKEYVTPEKFDFWKAYGESIG 315 (351)
Q Consensus 286 l~P-Tp~~~~~~~~v~~~e~~~~~~~~~~~G 315 (351)
..| ...+ ....-..+...+++++....|
T Consensus 165 V~PGfgGQ--~fi~~~l~KI~~lr~~~~~~~ 193 (246)
T 3inp_A 165 VNPGFGGQ--KFIPAMLDKAKEISKWISSTD 193 (246)
T ss_dssp SCTTC--C--CCCTTHHHHHHHHHHHHHHHT
T ss_pred ecCCCCCc--ccchHHHHHHHHHHHHHHhcC
Confidence 356 2221 111222345566666665545
No 36
>2dqw_A Dihydropteroate synthase; dimer, structural genomics; 1.65A {Thermus thermophilus} PDB: 2dza_A* 2dzb_A*
Probab=92.28 E-value=1.6 Score=39.57 Aligned_cols=138 Identities=15% Similarity=0.115 Sum_probs=72.4
Q ss_pred CCchhHHHHHHHHHhCCCcEEEEeccC-CC---CC-CCCcHHHHHHHHHHHHHhCCCcEEEEeecC--------------
Q 018731 131 PDPMEPENTAKAIASWGVDYIVLTSVD-RD---DI-PDGGSGHFARTVKAMKKQKPDIMVECLTSD-------------- 191 (351)
Q Consensus 131 ~~~eei~~~~~~~~~~G~~~I~ltgg~-~~---~l-~~~~~~~~~~li~~ik~~~p~i~i~~~~~~-------------- 191 (351)
.+.+.+.+.++++.+.|.+-|-+.|.. .+ .. ...+.+++..+++.+++. ++.|.+=|..
T Consensus 49 ~~~~~a~~~a~~~v~~GAdIIDIGgeSTrPga~~v~~~eE~~Rv~pvI~~l~~~--~vpiSIDT~~~~Va~aAl~aGa~i 126 (294)
T 2dqw_A 49 LDPERALERAREMVAEGADILDLGAESTRPGAAPVPVEEEKRRLLPVLEAVLSL--GVPVSVDTRKPEVAEEALKLGAHL 126 (294)
T ss_dssp ----CCHHHHHHHHHHTCSEEEEECC-----------CCHHHHHHHHHHHHHTT--CSCEEEECSCHHHHHHHHHHTCSE
T ss_pred CCHHHHHHHHHHHHHCCCCEEEECCCcCCCCCCCCCHHHHHHHHHHHHHHHHhC--CCeEEEECCCHHHHHHHHHhCCCE
Confidence 456777888888899999998887622 11 01 134567888888888864 4444321210
Q ss_pred -----CCCCHHHHHHHHHcCCCeeecchh-ch-HHHHhhhcCCCCC------HHHHHHHHHHHHHhCCCCe-EEEeeeee
Q 018731 192 -----FRGDLRAVETLVHSGLDVFAHNIE-TV-KRLQRIVRDPRAG------YEQSLEVLKHAKLSKKGLI-TKSSIMLG 257 (351)
Q Consensus 192 -----~~~~~e~l~~L~~aG~~~i~~~ie-s~-~~~~~~~r~~~~~------~~~~l~~i~~~~~~~~Gi~-v~~~~IvG 257 (351)
+..+++.++..+++|+-.+-+..+ .. ..+... +.+. .+...+.++.+.+ .|+. +-.|--+|
T Consensus 127 INdVsg~~d~~m~~v~a~~~~~vVlmh~~eG~p~tm~~~---~~y~dv~~ev~~~l~~~i~~a~~--~Gi~~IilDPG~G 201 (294)
T 2dqw_A 127 LNDVTGLRDERMVALAARHGVAAVVMHMPVPDPATMMAH---ARYRDVVAEVKAFLEAQARRALS--AGVPQVVLDPGFG 201 (294)
T ss_dssp EECSSCSCCHHHHHHHHHHTCEEEEECCSSSCTTTGGGG---CCCSSHHHHHHHHHHHHHHHHHH--TTCSCEEEECCTT
T ss_pred EEECCCCCChHHHHHHHHhCCCEEEEcCCCCCCcccccc---CccccHHHHHHHHHHHHHHHHHH--CCCCcEEEcCCCC
Confidence 002344444444444444333222 10 011100 1111 3345556777777 8986 44444457
Q ss_pred CCCCHHHHHHHHHHHHhC
Q 018731 258 LGESDDDLKEAMADLRSI 275 (351)
Q Consensus 258 lgEt~e~~~~~l~~l~~l 275 (351)
||.|.++-.++++.++++
T Consensus 202 f~kt~~~n~~ll~~l~~~ 219 (294)
T 2dqw_A 202 FGKLLEHNLALLRRLDEI 219 (294)
T ss_dssp SSCCHHHHHHHHHTHHHH
T ss_pred cccCHHHHHHHHHHHHHH
Confidence 789888777777766553
No 37
>3dxi_A Putative aldolase; TIM barrel, 11107N, PSI2, NYSGXRC, structural genomics, protein structure initiative; 2.04A {Bacteroides vulgatus atcc 8482}
Probab=92.05 E-value=1.6 Score=40.12 Aligned_cols=136 Identities=10% Similarity=0.101 Sum_probs=80.9
Q ss_pred CCCchhHHHHHHHHHhCCCcEEEEeccC-CCCCCCCcHHHH--HHHHHHHHHhCCCcEEEEeecCCCCCHHHHHHH---H
Q 018731 130 PPDPMEPENTAKAIASWGVDYIVLTSVD-RDDIPDGGSGHF--ARTVKAMKKQKPDIMVECLTSDFRGDLRAVETL---V 203 (351)
Q Consensus 130 ~~~~eei~~~~~~~~~~G~~~I~ltgg~-~~~l~~~~~~~~--~~li~~ik~~~p~i~i~~~~~~~~~~~e~l~~L---~ 203 (351)
.++.++.+++++.+.+.|+..|=++... +....+. ...+ .+.++.+++ .|+..+.++.++....++-++.+ .
T Consensus 20 ~~~~~~k~~ia~~L~~aGv~~IEvg~~~~p~~~f~~-~~~~~~~e~l~~i~~-~~~~~~~~L~r~~~~~~~dv~~~~~a~ 97 (320)
T 3dxi_A 20 DFNSKIVDAYILAMNELPIDYLEVGYRNKPSKEYMG-KFGYTPVSVLKHLRN-ISTKKIAIMLNEKNTTPEDLNHLLLPI 97 (320)
T ss_dssp CCCHHHHHHHHHHHHTTTCCEEEEEECCSCCSSCCC-HHHHCCHHHHHHHHH-HCCSEEEEEEEGGGCCGGGHHHHHGGG
T ss_pred cCCHHHHHHHHHHHHHhCCCEEEEecccCCcccccc-ccccChHHHHHHHhh-ccCCeEEEEecCCCCChhhHHHHHHhh
Confidence 4677899999999999999998776332 1111110 1222 355666666 47888887765421112223322 4
Q ss_pred HcCCCeeecchhchHHHHhhhcCCCCCHHHHHHHHHHHHHhCCCCeEEEeeeeeCCC-CHHHHHHHHHHHHhCCCCEEee
Q 018731 204 HSGLDVFAHNIETVKRLQRIVRDPRAGYEQSLEVLKHAKLSKKGLITKSSIMLGLGE-SDDDLKEAMADLRSIDVDILTL 282 (351)
Q Consensus 204 ~aG~~~i~~~ies~~~~~~~~r~~~~~~~~~l~~i~~~~~~~~Gi~v~~~~IvGlgE-t~e~~~~~l~~l~~lg~d~i~i 282 (351)
++|++.+.+.. ..++.++..+.++.+++ .|+.+...+...-+- +.+.+.+.+..+ +.|++.+.+
T Consensus 98 ~~Gvd~~ri~~------------~~~nle~~~~~v~~ak~--~G~~v~~~~~~~~~~~~~~~~l~~~~~~-~~G~~~i~l 162 (320)
T 3dxi_A 98 IGLVDMIRIAI------------DPQNIDRAIVLAKAIKT--MGFEVGFNVMYMSKWAEMNGFLSKLKAI-DKIADLFCM 162 (320)
T ss_dssp TTTCSEEEEEE------------CGGGHHHHHHHHHHHHT--TTCEEEEEECCTTTGGGSTTSGGGGGGG-TTTCSEEEE
T ss_pred hcCCCEEEEEe------------cHHHHHHHHHHHHHHHH--CCCEEEEEEEeCCCCCCHHHHHHHHHHh-hCCCCEEEE
Confidence 47888875531 12357888899999999 999887776652222 222333333322 468888777
No 38
>2bdq_A Copper homeostasis protein CUTC; alpha beta protein, structural genomics, PSI, protein structure initiative; 2.30A {Streptococcus agalactiae}
Probab=91.89 E-value=1.5 Score=38.08 Aligned_cols=130 Identities=12% Similarity=0.117 Sum_probs=73.9
Q ss_pred hHHHHHHHHHhCCCcEEEEeccCCCCCCCCcHHHHHHHHHHHHHhCCCcEEEEeecCCC--CC-HHHHHHHHHcCCCeee
Q 018731 135 EPENTAKAIASWGVDYIVLTSVDRDDIPDGGSGHFARTVKAMKKQKPDIMVECLTSDFR--GD-LRAVETLVHSGLDVFA 211 (351)
Q Consensus 135 ei~~~~~~~~~~G~~~I~ltgg~~~~l~~~~~~~~~~li~~ik~~~p~i~i~~~~~~~~--~~-~e~l~~L~~aG~~~i~ 211 (351)
.+.+.++.+.+.|++.|+|.--+++--- +.+...++++..... .++++- .-|.. .+ .+.++.|.+.|+++|.
T Consensus 77 ~M~~Di~~~~~~GadGvV~G~Lt~dg~i--D~~~~~~Li~~a~~~--~vTFHR-AFD~~~~~d~~~ale~L~~lGv~rIL 151 (224)
T 2bdq_A 77 IMEEDILRAVELESDALVLGILTSNNHI--DTEAIEQLLPATQGL--PLVFHM-AFDVIPKSDQKKSIDQLVALGFTRIL 151 (224)
T ss_dssp HHHHHHHHHHHTTCSEEEECCBCTTSSB--CHHHHHHHHHHHTTC--CEEECG-GGGGSCTTTHHHHHHHHHHTTCCEEE
T ss_pred HHHHHHHHHHHcCCCEEEEeeECCCCCc--CHHHHHHHHHHhCCC--eEEEEC-chhccCCcCHHHHHHHHHHcCCCEEE
Confidence 3456777888999999999554432222 256777777655432 344431 01211 23 5789999999999984
Q ss_pred c-chhchHHHHhhhcCCCCCHHHHHHHHHHHHHhCCCCeEEEeeeeeCCCCHHHHHHHHHHHHhCCCCEEeeeccc
Q 018731 212 H-NIETVKRLQRIVRDPRAGYEQSLEVLKHAKLSKKGLITKSSIMLGLGESDDDLKEAMADLRSIDVDILTLGQYL 286 (351)
Q Consensus 212 ~-~ies~~~~~~~~r~~~~~~~~~l~~i~~~~~~~~Gi~v~~~~IvGlgEt~e~~~~~l~~l~~lg~d~i~i~~~l 286 (351)
- |-.. ..+..+-++.++.+.+...| ...+|.|=|=+.+.+.+. +.+.|++.++.+...
T Consensus 152 TSG~~~-----------~~~a~~g~~~L~~Lv~~a~~---ri~Im~GgGV~~~Ni~~l---~~~tGv~e~H~s~i~ 210 (224)
T 2bdq_A 152 LHGSSN-----------GEPIIENIKHIKALVEYANN---RIEIMVGGGVTAENYQYI---CQETGVKQAHGTRIT 210 (224)
T ss_dssp ECSCSS-----------CCCGGGGHHHHHHHHHHHTT---SSEEEECSSCCTTTHHHH---HHHHTCCEEEETTCC
T ss_pred CCCCCC-----------CCcHHHHHHHHHHHHHhhCC---CeEEEeCCCCCHHHHHHH---HHhhCCCEEcccccc
Confidence 2 2110 11133333444444321122 235788777777766654 345789888875443
No 39
>3usb_A Inosine-5'-monophosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, CBS-domain; HET: MSE IMP; 2.38A {Bacillus anthracis} PDB: 3tsd_A* 3tsb_A*
Probab=91.77 E-value=5.9 Score=38.76 Aligned_cols=134 Identities=18% Similarity=0.242 Sum_probs=84.4
Q ss_pred hHHHHHHHHHhCCCcEEEEeccCCCCCCCCcHHHHHHHHHHHHHhCCCcEEEEeecCCCCCHHHHHHHHHcCCCeeecch
Q 018731 135 EPENTAKAIASWGVDYIVLTSVDRDDIPDGGSGHFARTVKAMKKQKPDIMVECLTSDFRGDLRAVETLVHSGLDVFAHNI 214 (351)
Q Consensus 135 ei~~~~~~~~~~G~~~I~ltgg~~~~l~~~~~~~~~~li~~ik~~~p~i~i~~~~~~~~~~~e~l~~L~~aG~~~i~~~i 214 (351)
+..+.++.+.+.|++.|.+.+.++. ...+.++++++++.+|++.+-+-. ..+.+.++.+.++|+|.|.++.
T Consensus 256 d~~era~aLveaGvd~I~Id~a~g~------~~~v~~~i~~i~~~~~~~~vi~g~---v~t~e~a~~~~~aGad~i~vg~ 326 (511)
T 3usb_A 256 DAMTRIDALVKASVDAIVLDTAHGH------SQGVIDKVKEVRAKYPSLNIIAGN---VATAEATKALIEAGANVVKVGI 326 (511)
T ss_dssp THHHHHHHHHHTTCSEEEEECSCTT------SHHHHHHHHHHHHHCTTSEEEEEE---ECSHHHHHHHHHHTCSEEEECS
T ss_pred chHHHHHHHHhhccceEEecccccc------hhhhhhHHHHHHHhCCCceEEeee---eccHHHHHHHHHhCCCEEEECC
Confidence 4456677888899999999766541 367889999999998876554311 1378899999999999998754
Q ss_pred hchHH-HHhhhcCC-CCCHHHHHHHHHHHHHhCCCCeEEEeeeeeCCCCHHHHHHHHHHHHhCCCCEEeeeccc
Q 018731 215 ETVKR-LQRIVRDP-RAGYEQSLEVLKHAKLSKKGLITKSSIMLGLGESDDDLKEAMADLRSIDVDILTLGQYL 286 (351)
Q Consensus 215 es~~~-~~~~~r~~-~~~~~~~l~~i~~~~~~~~Gi~v~~~~IvGlgEt~e~~~~~l~~l~~lg~d~i~i~~~l 286 (351)
....- ..+...+- ..+.....+..+.+++ .++.+-++. | --+.+|+.+.+ .+|++.+.++..+
T Consensus 327 g~gsi~~~~~~~g~g~p~~~~l~~v~~~~~~--~~iPVIa~G--G-I~~~~di~kal----a~GA~~V~vGs~~ 391 (511)
T 3usb_A 327 GPGSICTTRVVAGVGVPQLTAVYDCATEARK--HGIPVIADG--G-IKYSGDMVKAL----AAGAHVVMLGSMF 391 (511)
T ss_dssp SCSTTCCHHHHHCCCCCHHHHHHHHHHHHHT--TTCCEEEES--C-CCSHHHHHHHH----HTTCSEEEESTTT
T ss_pred CCccccccccccCCCCCcHHHHHHHHHHHHh--CCCcEEEeC--C-CCCHHHHHHHH----HhCchhheecHHH
Confidence 33221 01111111 2234444455555555 566532211 1 24677777664 4799999887554
No 40
>3bg3_A Pyruvate carboxylase, mitochondrial; TIM barrel, ATP-binding, biotin, disease mutation, gluconeogenesis, ligase, lipid synthesis, manganese; HET: KCX BTI; 2.80A {Homo sapiens} PDB: 3bg9_A
Probab=91.72 E-value=2.7 Score=42.97 Aligned_cols=135 Identities=14% Similarity=0.025 Sum_probs=90.1
Q ss_pred CCCchhHHHHHHHHHhC--CCcEEEEeccCCC-----CCCCCcHHHHHHHHHHHHHhCCCcEEEEeecC--CC----C--
Q 018731 130 PPDPMEPENTAKAIASW--GVDYIVLTSVDRD-----DIPDGGSGHFARTVKAMKKQKPDIMVECLTSD--FR----G-- 194 (351)
Q Consensus 130 ~~~~eei~~~~~~~~~~--G~~~I~ltgg~~~-----~l~~~~~~~~~~li~~ik~~~p~i~i~~~~~~--~~----~-- 194 (351)
+++.++.+++++.+.+. |+..|=+.||... .+.... .+.++.+++..|+..+.++... .. .
T Consensus 121 r~~~edkl~Ia~~Ld~~Gvg~~~IE~gGGatfd~~~~f~~e~p----~e~l~~l~~~~~~~~l~~l~R~~n~vgy~~~p~ 196 (718)
T 3bg3_A 121 RVRTHDLKKIAPYVAHNFSKLFSMENWGGATFDVAMRFLYECP----WRRLQELRELIPNIPFQMLLRGANAVGYTNYPD 196 (718)
T ss_dssp CCCHHHHHHHHHHHHHHCTTCSEEEEEETTHHHHHHHTSCCCH----HHHHHHHHHHCSSSCEEEEECGGGTTSSSCCCH
T ss_pred CCCHHHHHHHHHHHHHhcCCCcEEEecCCcchhhccccCCCCH----HHHHHHHHHHcccchHHHHhcccccccccccCC
Confidence 46788999999999887 5666877765421 122111 2445556666666666543321 10 0
Q ss_pred --CHHHHHHHHHcCCCeeecchhchHHHHhhhcCCCCCHHHHHHHHHHHHHhCCCCeEEEeeeee---C-C----CCHHH
Q 018731 195 --DLRAVETLVHSGLDVFAHNIETVKRLQRIVRDPRAGYEQSLEVLKHAKLSKKGLITKSSIMLG---L-G----ESDDD 264 (351)
Q Consensus 195 --~~e~l~~L~~aG~~~i~~~ies~~~~~~~~r~~~~~~~~~l~~i~~~~~~~~Gi~v~~~~IvG---l-g----Et~e~ 264 (351)
..+.++...++|++.+.+.. + -...+.....++.+++ .|..+...+.+. . . -+.+.
T Consensus 197 ~~~~~~i~~a~~~Gvd~irIf~-s-----------~n~l~~l~~~i~~ak~--~G~~v~~~i~~~~d~~dp~r~~~~~e~ 262 (718)
T 3bg3_A 197 NVVFKFCEVAKENGMDVFRVFD-S-----------LNYLPNMLLGMEAAGS--AGGVVEAAISYTGDVADPSRTKYSLQY 262 (718)
T ss_dssp HHHHHHHHHHHHHTCCEEEEEC-S-----------SCCHHHHHHHHHHHHT--TTSEEEEEEECCSCTTCTTCCTTCHHH
T ss_pred cchHHHHHHHHhcCcCEEEEEe-c-----------HHHHHHHHHHHHHHHH--cCCeEEEEEEeeccccCCCCCCCCHHH
Confidence 24678899999999986542 1 1245566677888888 898877666554 1 1 27788
Q ss_pred HHHHHHHHHhCCCCEEee
Q 018731 265 LKEAMADLRSIDVDILTL 282 (351)
Q Consensus 265 ~~~~l~~l~~lg~d~i~i 282 (351)
+.+.++.+.++|++.+.+
T Consensus 263 ~~~~a~~l~~~Ga~~I~l 280 (718)
T 3bg3_A 263 YMGLAEELVRAGTHILCI 280 (718)
T ss_dssp HHHHHHHHHHHTCSEEEE
T ss_pred HHHHHHHHHHcCCCEEEE
Confidence 999999999999998887
No 41
>2y5s_A DHPS, dihydropteroate synthase; transferase, folate biosynthesis; HET: 78H; 1.95A {Burkholderia cenocepacia} PDB: 2y5j_A*
Probab=91.50 E-value=3.5 Score=37.35 Aligned_cols=138 Identities=15% Similarity=0.127 Sum_probs=83.6
Q ss_pred CCchhHHHHHHHHHhCCCcEEEEeccC-CCC---CC-CCcHHHHHHHHHHHHHhCCCcEEEEeecCCCCCHHHHHHHHHc
Q 018731 131 PDPMEPENTAKAIASWGVDYIVLTSVD-RDD---IP-DGGSGHFARTVKAMKKQKPDIMVECLTSDFRGDLRAVETLVHS 205 (351)
Q Consensus 131 ~~~eei~~~~~~~~~~G~~~I~ltgg~-~~~---l~-~~~~~~~~~li~~ik~~~p~i~i~~~~~~~~~~~e~l~~L~~a 205 (351)
.+.+.+.+.+++..+.|+.-|-+.|.. .+. .+ ..+.+++..+++.+++. ++.|.+=| .+.+.++.-.++
T Consensus 43 ~~~~~a~~~a~~~v~~GAdiIDIGgeSTrPga~~v~~~eE~~Rv~pvi~~l~~~--~vpiSIDT----~~~~Va~aAl~a 116 (294)
T 2y5s_A 43 LARDDALRRAERMIAEGADLLDIGGESTRPGAPPVPLDEELARVIPLVEALRPL--NVPLSIDT----YKPAVMRAALAA 116 (294)
T ss_dssp -CTTHHHHHHHHHHHTTCSEEEEESSCCSTTCCCCCHHHHHHHHHHHHHHHGGG--CSCEEEEC----CCHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHCCCCEEEECCCcCCCCCCCCCHHHHHHHHHHHHHHHhhC--CCeEEEEC----CCHHHHHHHHHc
Confidence 467888899999999999998887632 111 11 12345666777777654 44444322 267788887778
Q ss_pred CCCeee-cchhchHHHHhhhc------------C-CC--------C-C-----HHHHHHHHHHHHHhCCCCe---EEEee
Q 018731 206 GLDVFA-HNIETVKRLQRIVR------------D-PR--------A-G-----YEQSLEVLKHAKLSKKGLI---TKSSI 254 (351)
Q Consensus 206 G~~~i~-~~ies~~~~~~~~r------------~-~~--------~-~-----~~~~l~~i~~~~~~~~Gi~---v~~~~ 254 (351)
|.+-|+ ++-+..+++.+... + |. + + .+...+.++.+.+ .|+. +-.|-
T Consensus 117 Ga~iINdVsg~~d~~m~~~~a~~~~~vVlmh~~G~p~tm~~~~~~y~dv~~ev~~~l~~~i~~a~~--~Gi~~~~IilDP 194 (294)
T 2y5s_A 117 GADLINDIWGFRQPGAIDAVRDGNSGLCAMHMLGEPQTMQVGEPDYGDVVTDVRDFLAARAQALRD--AGVAAERICVDP 194 (294)
T ss_dssp TCSEEEETTTTCSTTHHHHHSSSSCEEEEECCCEETTTTEECCCCCSSHHHHHHHHHHHHHHHHHH--TTCCGGGEEEEC
T ss_pred CCCEEEECCCCCchHHHHHHHHhCCCEEEECCCCCCccccccCCccccHHHHHHHHHHHHHHHHHH--cCCChhhEEEeC
Confidence 887775 22222112221111 0 00 0 1 3445556777777 8996 77776
Q ss_pred eeeCCCCH-HHHHHHHHHHHhCC
Q 018731 255 MLGLGESD-DDLKEAMADLRSID 276 (351)
Q Consensus 255 IvGlgEt~-e~~~~~l~~l~~lg 276 (351)
-+|++.|. ++-.++++.+.++.
T Consensus 195 G~Gf~kt~~~~n~~ll~~l~~l~ 217 (294)
T 2y5s_A 195 GFGFGKAVVDDNYALLAALPDTA 217 (294)
T ss_dssp CTTSSSCTTHHHHHHHHTGGGGS
T ss_pred CCcccccchHHHHHHHHHHHHHH
Confidence 67788887 77778888777665
No 42
>2r91_A 2-keto-3-deoxy-(6-phospho-)gluconate aldolase; TIM barrel, thermophilic, lyase; 2.00A {Thermoproteus tenax} PDB: 2r94_A
Probab=90.81 E-value=4 Score=36.71 Aligned_cols=100 Identities=11% Similarity=0.185 Sum_probs=65.5
Q ss_pred HHHHHHHHcCCCeeecchhchHHHHhhhcCCCCCHHHHHHHHHHHHHhCCCCeEEEeeeeeC-CCCHHHHHHHHHHHHhC
Q 018731 197 RAVETLVHSGLDVFAHNIETVKRLQRIVRDPRAGYEQSLEVLKHAKLSKKGLITKSSIMLGL-GESDDDLKEAMADLRSI 275 (351)
Q Consensus 197 e~l~~L~~aG~~~i~~~ies~~~~~~~~r~~~~~~~~~l~~i~~~~~~~~Gi~v~~~~IvGl-gEt~e~~~~~l~~l~~l 275 (351)
..++.+.+.|++.+.+.=-|.+- ..-+.+++.+.++.+.+...| +|+|. +.+.++..+..+.+.+.
T Consensus 23 ~lv~~li~~Gv~gl~v~GttGE~-------~~Ls~~Er~~v~~~~~~~~~g------vi~Gvg~~~t~~ai~la~~A~~~ 89 (286)
T 2r91_A 23 NHVKNITSKGVDVVFVAGTTGLG-------PALSLQEKMELTDAATSAARR------VIVQVASLNADEAIALAKYAESR 89 (286)
T ss_dssp HHHHHHHHTTCCEEEETSTTTTG-------GGSCHHHHHHHHHHHHHHCSS------EEEECCCSSHHHHHHHHHHHHHT
T ss_pred HHHHHHHHCCCCEEEECccccCh-------hhCCHHHHHHHHHHHHHHhCC------EEEeeCCCCHHHHHHHHHHHHhc
Confidence 56677778899998653222211 124778888888888774444 88999 56788888999999999
Q ss_pred CCCEEeeecccCCCCCcccccCCCCHHH-HHHHHHHHHhcCcc
Q 018731 276 DVDILTLGQYLQPTPLHLTVKEYVTPEK-FDFWKAYGESIGFR 317 (351)
Q Consensus 276 g~d~i~i~~~l~PTp~~~~~~~~v~~~e-~~~~~~~~~~~G~~ 317 (351)
|+|.+.+. +|.+.. ..+.++ +..++++++..+..
T Consensus 90 Gadavlv~-----~P~y~~---~~s~~~l~~~f~~va~a~~lP 124 (286)
T 2r91_A 90 GAEAVASL-----PPYYFP---RLSERQIAKYFRDLCSAVSIP 124 (286)
T ss_dssp TCSEEEEC-----CSCSST---TCCHHHHHHHHHHHHHHCSSC
T ss_pred CCCEEEEc-----CCcCCC---CCCHHHHHHHHHHHHHhcCCC
Confidence 99987662 233311 023444 44566677765543
No 43
>4fxs_A Inosine-5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.24A {Vibrio cholerae o1 biovar el tor}
Probab=90.76 E-value=4.7 Score=39.34 Aligned_cols=130 Identities=15% Similarity=0.175 Sum_probs=82.6
Q ss_pred HHHHHHHHHhCCCcEEEEeccCCCCCCCCcHHHHHHHHHHHHHhCCCcEEEEeecCCCCCHHHHHHHHHcCCCeeecchh
Q 018731 136 PENTAKAIASWGVDYIVLTSVDRDDIPDGGSGHFARTVKAMKKQKPDIMVECLTSDFRGDLRAVETLVHSGLDVFAHNIE 215 (351)
Q Consensus 136 i~~~~~~~~~~G~~~I~ltgg~~~~l~~~~~~~~~~li~~ik~~~p~i~i~~~~~~~~~~~e~l~~L~~aG~~~i~~~ie 215 (351)
..+.++.+.+.|++.|.+....+. ...+.+.++.+++.+|++.|-+- ...+.+.++.+.++|+|.|.++.-
T Consensus 232 ~~~~a~~l~~aG~d~I~id~a~g~------~~~~~~~i~~ir~~~p~~~Vi~g---~v~t~e~a~~l~~aGaD~I~Vg~g 302 (496)
T 4fxs_A 232 NEERVKALVEAGVDVLLIDSSHGH------SEGVLQRIRETRAAYPHLEIIGG---NVATAEGARALIEAGVSAVKVGIG 302 (496)
T ss_dssp CHHHHHHHHHTTCSEEEEECSCTT------SHHHHHHHHHHHHHCTTCCEEEE---EECSHHHHHHHHHHTCSEEEECSS
T ss_pred hHHHHHHHHhccCceEEecccccc------chHHHHHHHHHHHHCCCceEEEc---ccCcHHHHHHHHHhCCCEEEECCC
Confidence 355677777889999999766541 26788999999998887665431 123788999999999999976421
Q ss_pred ch----HHHHhhhcCCCCCHHHHHHHHHHHHHhCCCCeEEEeeeeeC-CCCHHHHHHHHHHHHhCCCCEEeeeccc
Q 018731 216 TV----KRLQRIVRDPRAGYEQSLEVLKHAKLSKKGLITKSSIMLGL-GESDDDLKEAMADLRSIDVDILTLGQYL 286 (351)
Q Consensus 216 s~----~~~~~~~r~~~~~~~~~l~~i~~~~~~~~Gi~v~~~~IvGl-gEt~e~~~~~l~~l~~lg~d~i~i~~~l 286 (351)
.. .+...... ...+.-+.+..+.+++ .++.+ |..- -.+.+|+.+.+ .+|++.+.++..+
T Consensus 303 ~Gs~~~tr~~~g~g--~p~~~~i~~v~~~~~~--~~iPV----Ia~GGI~~~~di~kal----a~GAd~V~iGs~f 366 (496)
T 4fxs_A 303 PGSICTTRIVTGVG--VPQITAIADAAGVANE--YGIPV----IADGGIRFSGDISKAI----AAGASCVMVGSMF 366 (496)
T ss_dssp CCTTBCHHHHHCCC--CCHHHHHHHHHHHHGG--GTCCE----EEESCCCSHHHHHHHH----HTTCSEEEESTTT
T ss_pred CCcCcccccccCCC--ccHHHHHHHHHHHhcc--CCCeE----EEeCCCCCHHHHHHHH----HcCCCeEEecHHH
Confidence 11 11111111 2244444555555555 56653 3311 24677777664 3699998887554
No 44
>3na8_A Putative dihydrodipicolinate synthetase; lyase; HET: MSE; 1.85A {Pseudomonas aeruginosa}
Probab=90.76 E-value=3.5 Score=37.72 Aligned_cols=93 Identities=15% Similarity=0.106 Sum_probs=57.6
Q ss_pred CCCcEEEEeec---CCCCCH----HHHHHHHHcCCCeeecchhchHHHHhhhcCCCCCHHHHHHHHHHHHHhCCCCeEEE
Q 018731 180 KPDIMVECLTS---DFRGDL----RAVETLVHSGLDVFAHNIETVKRLQRIVRDPRAGYEQSLEVLKHAKLSKKGLITKS 252 (351)
Q Consensus 180 ~p~i~i~~~~~---~~~~~~----e~l~~L~~aG~~~i~~~ies~~~~~~~~r~~~~~~~~~l~~i~~~~~~~~Gi~v~~ 252 (351)
+.++...+.|| ++.+|. ..++.+.+.|++.+.+.=-|.+- ..-+.+++.+.++.+.+...| ..
T Consensus 25 ~~Gv~~a~vTPf~~dg~iD~~~l~~lv~~li~~Gv~Gi~v~GtTGE~-------~~Ls~~Er~~v~~~~v~~~~g---rv 94 (315)
T 3na8_A 25 IHGIIGYTITPFAADGGLDLPALGRSIERLIDGGVHAIAPLGSTGEG-------AYLSDPEWDEVVDFTLKTVAH---RV 94 (315)
T ss_dssp CCEEEEECCCCBCTTSSBCHHHHHHHHHHHHHTTCSEEECSSGGGTG-------GGSCHHHHHHHHHHHHHHHTT---SS
T ss_pred cCceEEEeeCcCCCCCCcCHHHHHHHHHHHHHcCCCEEEECccccCh-------hhCCHHHHHHHHHHHHHHhCC---CC
Confidence 34444333343 344453 56667778899987654222221 123667777777776653333 24
Q ss_pred eeeeeC-CCCHHHHHHHHHHHHhCCCCEEee
Q 018731 253 SIMLGL-GESDDDLKEAMADLRSIDVDILTL 282 (351)
Q Consensus 253 ~~IvGl-gEt~e~~~~~l~~l~~lg~d~i~i 282 (351)
-+|+|. +.+.++..+..+.+.++|+|.+.+
T Consensus 95 pViaGvg~~~t~~ai~la~~A~~~Gadavlv 125 (315)
T 3na8_A 95 PTIVSVSDLTTAKTVRRAQFAESLGAEAVMV 125 (315)
T ss_dssp CBEEECCCSSHHHHHHHHHHHHHTTCSEEEE
T ss_pred cEEEecCCCCHHHHHHHHHHHHhcCCCEEEE
Confidence 467788 467788888888888899887666
No 45
>4avf_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase; 2.23A {Pseudomonas aeruginosa}
Probab=90.72 E-value=9.3 Score=37.13 Aligned_cols=133 Identities=20% Similarity=0.204 Sum_probs=83.8
Q ss_pred hHHHHHHHHHhCCCcEEEEeccCCCCCCCCcHHHHHHHHHHHHHhCCCcEEEEeecCCCCCHHHHHHHHHcCCCeeecch
Q 018731 135 EPENTAKAIASWGVDYIVLTSVDRDDIPDGGSGHFARTVKAMKKQKPDIMVECLTSDFRGDLRAVETLVHSGLDVFAHNI 214 (351)
Q Consensus 135 ei~~~~~~~~~~G~~~I~ltgg~~~~l~~~~~~~~~~li~~ik~~~p~i~i~~~~~~~~~~~e~l~~L~~aG~~~i~~~i 214 (351)
+..+.++.+.+.|++.|.+....+ . ...+.+.++.+++.+|++.+-+- ...+.+.++.+.++|+|.|.++.
T Consensus 229 ~~~~~a~~l~~aG~d~I~id~a~g--~----~~~~~~~v~~i~~~~p~~~Vi~g---~v~t~e~a~~l~~aGaD~I~vg~ 299 (490)
T 4avf_A 229 DTGERVAALVAAGVDVVVVDTAHG--H----SKGVIERVRWVKQTFPDVQVIGG---NIATAEAAKALAEAGADAVKVGI 299 (490)
T ss_dssp THHHHHHHHHHTTCSEEEEECSCC--S----BHHHHHHHHHHHHHCTTSEEEEE---EECSHHHHHHHHHTTCSEEEECS
T ss_pred chHHHHHHHhhcccceEEecccCC--c----chhHHHHHHHHHHHCCCceEEEe---eeCcHHHHHHHHHcCCCEEEECC
Confidence 445667778888999999876553 1 26788999999998888765441 12378999999999999998754
Q ss_pred hchHH-HHhhhcCCC-CCHHHHHHHHHHHHHhCCCCeEEEeeeeeCC-CCHHHHHHHHHHHHhCCCCEEeeeccc
Q 018731 215 ETVKR-LQRIVRDPR-AGYEQSLEVLKHAKLSKKGLITKSSIMLGLG-ESDDDLKEAMADLRSIDVDILTLGQYL 286 (351)
Q Consensus 215 es~~~-~~~~~r~~~-~~~~~~l~~i~~~~~~~~Gi~v~~~~IvGlg-Et~e~~~~~l~~l~~lg~d~i~i~~~l 286 (351)
..... -.+...+-+ ..+.-..+..+.+++ .++.+ |..=| .+.+|+.+.+. +|++.+.++..+
T Consensus 300 g~Gs~~~t~~~~g~g~p~~~~l~~v~~~~~~--~~iPV----Ia~GGI~~~~di~kal~----~GAd~V~vGs~~ 364 (490)
T 4avf_A 300 GPGSICTTRIVAGVGVPQISAIANVAAALEG--TGVPL----IADGGIRFSGDLAKAMV----AGAYCVMMGSMF 364 (490)
T ss_dssp SCSTTCHHHHHTCBCCCHHHHHHHHHHHHTT--TTCCE----EEESCCCSHHHHHHHHH----HTCSEEEECTTT
T ss_pred CCCcCCCccccCCCCccHHHHHHHHHHHhcc--CCCcE----EEeCCCCCHHHHHHHHH----cCCCeeeecHHH
Confidence 22211 111111111 244444444444444 56653 22112 46778777654 599998887554
No 46
>1w3i_A EDA, 2-keto-3-deoxy gluconate aldolase; archaeal metabolism, pyruvate; 1.7A {Sulfolobus solfataricus} SCOP: c.1.10.1 PDB: 1w37_A 1w3n_A* 1w3t_A* 2yda_A*
Probab=90.62 E-value=4 Score=36.84 Aligned_cols=106 Identities=22% Similarity=0.191 Sum_probs=68.0
Q ss_pred CCCCCH----HHHHHHHHcCCCeeecchhchHHHHhhhcCCCCCHHHHHHHHHHHHHhCCCCeEEEeeeeeC-CCCHHHH
Q 018731 191 DFRGDL----RAVETLVHSGLDVFAHNIETVKRLQRIVRDPRAGYEQSLEVLKHAKLSKKGLITKSSIMLGL-GESDDDL 265 (351)
Q Consensus 191 ~~~~~~----e~l~~L~~aG~~~i~~~ies~~~~~~~~r~~~~~~~~~l~~i~~~~~~~~Gi~v~~~~IvGl-gEt~e~~ 265 (351)
++.+|. ..++.+.+.|++.+.+.=-|.+- ..-+.+++.+.++.+.+...| +|+|. +.+.++.
T Consensus 14 dg~iD~~~l~~lv~~li~~Gv~gl~~~GttGE~-------~~Ls~eEr~~v~~~~~~~~~g------viaGvg~~~t~~a 80 (293)
T 1w3i_A 14 DNRIDKEKLKIHAENLIRKGIDKLFVNGTTGLG-------PSLSPEEKLENLKAVYDVTNK------IIFQVGGLNLDDA 80 (293)
T ss_dssp TSSBCHHHHHHHHHHHHHTTCCEEEESSTTTTG-------GGSCHHHHHHHHHHHHTTCSC------EEEECCCSCHHHH
T ss_pred CCCcCHHHHHHHHHHHHHcCCCEEEECccccCh-------hhCCHHHHHHHHHHHHHHcCC------EEEecCCCCHHHH
Confidence 444554 56677778899988653222211 134778888888888874344 88999 5678888
Q ss_pred HHHHHHHHhCCCCEEeeecccCCCCCcccccCCCCHHH-HHHHHHHHHhcCcc
Q 018731 266 KEAMADLRSIDVDILTLGQYLQPTPLHLTVKEYVTPEK-FDFWKAYGESIGFR 317 (351)
Q Consensus 266 ~~~l~~l~~lg~d~i~i~~~l~PTp~~~~~~~~v~~~e-~~~~~~~~~~~G~~ 317 (351)
.+..+.+.+.|+|.+.+. +|.+.. ..+.++ +..++++++..+..
T Consensus 81 i~la~~A~~~Gadavlv~-----~P~y~~---~~s~~~l~~~f~~va~a~~lP 125 (293)
T 1w3i_A 81 IRLAKLSKDFDIVGIASY-----APYYYP---RMSEKHLVKYFKTLCEVSPHP 125 (293)
T ss_dssp HHHHHHGGGSCCSEEEEE-----CCCSCS---SCCHHHHHHHHHHHHHHCSSC
T ss_pred HHHHHHHHhcCCCEEEEc-----CCCCCC---CCCHHHHHHHHHHHHhhCCCC
Confidence 899999999999987663 233311 023443 44566777765543
No 47
>2nuw_A 2-keto-3-deoxygluconate/2-keto-3-deoxy-6-phospho aldolase; TIM barrel, lyase; 1.80A {Sulfolobus acidocaldarius dsm 639} PDB: 2nux_A 2nuy_A
Probab=90.35 E-value=4.1 Score=36.67 Aligned_cols=106 Identities=10% Similarity=0.110 Sum_probs=68.5
Q ss_pred CCCCCH----HHHHHHHHcCCCeeecchhchHHHHhhhcCCCCCHHHHHHHHHHHHHhCCCCeEEEeeeeeC-CCCHHHH
Q 018731 191 DFRGDL----RAVETLVHSGLDVFAHNIETVKRLQRIVRDPRAGYEQSLEVLKHAKLSKKGLITKSSIMLGL-GESDDDL 265 (351)
Q Consensus 191 ~~~~~~----e~l~~L~~aG~~~i~~~ies~~~~~~~~r~~~~~~~~~l~~i~~~~~~~~Gi~v~~~~IvGl-gEt~e~~ 265 (351)
++.+|. ..++.+.+.|++.+.+.=-|.+- ..-+.+++.+.++.+.+...| +|+|. +.+.++.
T Consensus 14 dg~iD~~~l~~lv~~li~~Gv~gl~v~GtTGE~-------~~Ls~eEr~~v~~~~~~~~~g------ViaGvg~~~t~~a 80 (288)
T 2nuw_A 14 QGKVNVDALKTHAKNLLEKGIDAIFVNGTTGLG-------PALSKDEKRQNLNALYDVTHK------LIFQVGSLNLNDV 80 (288)
T ss_dssp TSCBCHHHHHHHHHHHHHTTCCEEEETSTTTTG-------GGSCHHHHHHHHHHHTTTCSC------EEEECCCSCHHHH
T ss_pred CCCcCHHHHHHHHHHHHHcCCCEEEECccccCh-------hhCCHHHHHHHHHHHHHHhCC------eEEeeCCCCHHHH
Confidence 444554 56677788899998653222211 134788888888888874344 88999 5678888
Q ss_pred HHHHHHHHhCCCCEEeeecccCCCCCcccccCCCCHHH-HHHHHHHHHhcCcc
Q 018731 266 KEAMADLRSIDVDILTLGQYLQPTPLHLTVKEYVTPEK-FDFWKAYGESIGFR 317 (351)
Q Consensus 266 ~~~l~~l~~lg~d~i~i~~~l~PTp~~~~~~~~v~~~e-~~~~~~~~~~~G~~ 317 (351)
.+..+.+.+.|+|.+.+. +|.+.. ..+.++ +..++++++..+..
T Consensus 81 i~la~~A~~~Gadavlv~-----~P~y~~---~~s~~~l~~~f~~va~a~~lP 125 (288)
T 2nuw_A 81 MELVKFSNEMDILGVSSH-----SPYYFP---RLPEKFLAKYYEEIARISSHS 125 (288)
T ss_dssp HHHHHHHHTSCCSEEEEC-----CCCSSC---SCCHHHHHHHHHHHHHHCCSC
T ss_pred HHHHHHHHhcCCCEEEEc-----CCcCCC---CCCHHHHHHHHHHHHHhcCCC
Confidence 899999999999987662 233311 024444 44567777765543
No 48
>1qwg_A PSL synthase;, (2R)-phospho-3-sulfolactate synthase; beta-alpha-barrel, lyase; 1.60A {Methanocaldococcus jannaschii} SCOP: c.1.27.1
Probab=90.05 E-value=9 Score=33.70 Aligned_cols=129 Identities=14% Similarity=0.062 Sum_probs=89.5
Q ss_pred CchhHHHHHHHHHhCCCcEEEEeccCCCCCCCCcHHHHHHHHHHHHHhCCCcEEEEeecCC--------CCCHHHHHHHH
Q 018731 132 DPMEPENTAKAIASWGVDYIVLTSVDRDDIPDGGSGHFARTVKAMKKQKPDIMVECLTSDF--------RGDLRAVETLV 203 (351)
Q Consensus 132 ~~eei~~~~~~~~~~G~~~I~ltgg~~~~l~~~~~~~~~~li~~ik~~~p~i~i~~~~~~~--------~~~~e~l~~L~ 203 (351)
.+....+.++.. ..-++.+-|.+|+...++ .+.+.+.++..+++ ++.+.. .+. -.-++.++..+
T Consensus 24 g~~~~~d~Le~~-g~yID~lKfg~Gt~~l~~---~~~l~eki~l~~~~--gV~v~~--GGTl~E~~~~qg~~~~yl~~~k 95 (251)
T 1qwg_A 24 PPKFVEDYLKVC-GDYIDFVKFGWGTSAVID---RDVVKEKINYYKDW--GIKVYP--GGTLFEYAYSKGKFDEFLNECE 95 (251)
T ss_dssp CHHHHHHHHHHH-GGGCSEEEECTTGGGGSC---HHHHHHHHHHHHTT--TCEEEE--CHHHHHHHHHTTCHHHHHHHHH
T ss_pred CHHHHHHHHHHh-hhhcceEEecCceeeecC---HHHHHHHHHHHHHc--CCeEEC--CcHHHHHHHHcCcHHHHHHHHH
Confidence 344444444332 233889999988854334 35688889888886 555532 110 02368999999
Q ss_pred HcCCCeeecchhchHHHHhhhcCCCCCHHHHHHHHHHHHHhCCCCeEEEeeeeeC-------CCCHHHHHHHHHHHHhCC
Q 018731 204 HSGLDVFAHNIETVKRLQRIVRDPRAGYEQSLEVLKHAKLSKKGLITKSSIMLGL-------GESDDDLKEAMADLRSID 276 (351)
Q Consensus 204 ~aG~~~i~~~ies~~~~~~~~r~~~~~~~~~l~~i~~~~~~~~Gi~v~~~~IvGl-------gEt~e~~~~~l~~l~~lg 276 (351)
+.|++.|-++--+. .-+.+++.+.|+.+++ .|+.+.+-+ |- -.+.+++.+.++.-.+.|
T Consensus 96 ~lGf~~iEiS~G~i----------~l~~~~~~~~I~~~~~--~G~~v~~Ev--G~k~~~~~~~~~~~~~I~~~~~~LeAG 161 (251)
T 1qwg_A 96 KLGFEAVEISDGSS----------DISLEERNNAIKRAKD--NGFMVLTEV--GKKMPDKDKQLTIDDRIKLINFDLDAG 161 (251)
T ss_dssp HHTCCEEEECCSSS----------CCCHHHHHHHHHHHHH--TTCEEEEEE--CCSSHHHHTTCCHHHHHHHHHHHHHHT
T ss_pred HcCCCEEEECCCcc----------cCCHHHHHHHHHHHHH--CCCEEeeec--cccCCcccCCCCHHHHHHHHHHHHHCC
Confidence 99999996652221 3477888999999999 999875543 43 256788899888888999
Q ss_pred CCEEee
Q 018731 277 VDILTL 282 (351)
Q Consensus 277 ~d~i~i 282 (351)
++.|-+
T Consensus 162 A~~Vii 167 (251)
T 1qwg_A 162 ADYVII 167 (251)
T ss_dssp CSEEEE
T ss_pred CcEEEE
Confidence 999887
No 49
>4af0_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase, GTP biosynthesis, drug resistance; HET: MOA IMP; 2.20A {Cryptococcus neoformans} PDB: 4af0_B*
Probab=89.97 E-value=3 Score=40.96 Aligned_cols=134 Identities=17% Similarity=0.147 Sum_probs=91.6
Q ss_pred hHHHHHHHHHhCCCcEEEEeccCCCCCCCCcHHHHHHHHHHHHHhCCCcEEEEeecCCCCCHHHHHHHHHcCCCeeecch
Q 018731 135 EPENTAKAIASWGVDYIVLTSVDRDDIPDGGSGHFARTVKAMKKQKPDIMVECLTSDFRGDLRAVETLVHSGLDVFAHNI 214 (351)
Q Consensus 135 ei~~~~~~~~~~G~~~I~ltgg~~~~l~~~~~~~~~~li~~ik~~~p~i~i~~~~~~~~~~~e~l~~L~~aG~~~i~~~i 214 (351)
+..+.++.+.+.|++-|++-..+. ..+...+.++.|++.+|++.|-+-. . .+.+..+.|.++|.|.|-+++
T Consensus 281 d~~eR~~aLv~AGvD~iviD~ahG------hs~~v~~~i~~ik~~~p~~~viaGN--V-aT~e~a~~Li~aGAD~vkVGi 351 (556)
T 4af0_A 281 GDKDRLKLLAEAGLDVVVLDSSQG------NSVYQIEFIKWIKQTYPKIDVIAGN--V-VTREQAAQLIAAGADGLRIGM 351 (556)
T ss_dssp HHHHHHHHHHHTTCCEEEECCSCC------CSHHHHHHHHHHHHHCTTSEEEEEE--E-CSHHHHHHHHHHTCSEEEECS
T ss_pred cHHHHHHHHHhcCCcEEEEecccc------ccHHHHHHHHHHHhhCCcceEEecc--c-cCHHHHHHHHHcCCCEEeecC
Confidence 456677888899999999855443 1378999999999999998765421 2 388999999999999998776
Q ss_pred hchHH-HHhhhcCCC-CCHHHHHHHHHHHHHhCCCCeEEEeeeeeCCCCHHHHHHHHHHHHhCCCCEEeeeccc
Q 018731 215 ETVKR-LQRIVRDPR-AGYEQSLEVLKHAKLSKKGLITKSSIMLGLGESDDDLKEAMADLRSIDVDILTLGQYL 286 (351)
Q Consensus 215 es~~~-~~~~~r~~~-~~~~~~l~~i~~~~~~~~Gi~v~~~~IvGlgEt~e~~~~~l~~l~~lg~d~i~i~~~l 286 (351)
=...- ..+.+.+-+ ...--+++..+.+++ .|+.+-++-=+ .+.-|+.+.+ ..|.|.|.++.+|
T Consensus 352 GpGSiCtTr~v~GvG~PQ~tAi~~~a~~a~~--~~vpvIADGGI---~~sGDi~KAl----aaGAd~VMlGsll 416 (556)
T 4af0_A 352 GSGSICITQEVMAVGRPQGTAVYAVAEFASR--FGIPCIADGGI---GNIGHIAKAL----ALGASAVMMGGLL 416 (556)
T ss_dssp SCSTTBCCTTTCCSCCCHHHHHHHHHHHHGG--GTCCEEEESCC---CSHHHHHHHH----HTTCSEEEESTTT
T ss_pred CCCcccccccccCCCCcHHHHHHHHHHHHHH--cCCCEEecCCc---CcchHHHHHh----hcCCCEEEEchhh
Confidence 54332 123332111 234456666677777 78776554311 3555665554 5899999998666
No 50
>1vzw_A Phosphoribosyl isomerase A; histidine biosynthesis, tryptophan biosynthesis; 1.8A {Streptomyces coelicolor} SCOP: c.1.2.1 PDB: 2vep_A 2x30_A
Probab=89.61 E-value=0.49 Score=41.44 Aligned_cols=76 Identities=17% Similarity=0.150 Sum_probs=53.1
Q ss_pred hHHHHHHHHHhCCCcEEEEeccCCCCCCCCcHHHHHHHHHHHHHhCCCcEEEEeecCCCCCHHHHHHHHHcCCCeeecch
Q 018731 135 EPENTAKAIASWGVDYIVLTSVDRDDIPDGGSGHFARTVKAMKKQKPDIMVECLTSDFRGDLRAVETLVHSGLDVFAHNI 214 (351)
Q Consensus 135 ei~~~~~~~~~~G~~~I~ltgg~~~~l~~~~~~~~~~li~~ik~~~p~i~i~~~~~~~~~~~e~l~~L~~aG~~~i~~~i 214 (351)
++.+.++.+.+.|++.+.+..-+...... ..+ ++++.+++.. ++.+.+ .++..+++.++.+.++|+|.|.++.
T Consensus 33 d~~~~a~~~~~~Gad~i~v~~~d~~~~~~---~~~-~~i~~i~~~~-~ipv~v--~ggI~~~~~~~~~l~~Gad~V~lg~ 105 (244)
T 1vzw_A 33 SPLEAALAWQRSGAEWLHLVDLDAAFGTG---DNR-ALIAEVAQAM-DIKVEL--SGGIRDDDTLAAALATGCTRVNLGT 105 (244)
T ss_dssp CHHHHHHHHHHTTCSEEEEEEHHHHHTSC---CCH-HHHHHHHHHC-SSEEEE--ESSCCSHHHHHHHHHTTCSEEEECH
T ss_pred CHHHHHHHHHHcCCCEEEEecCchhhcCC---ChH-HHHHHHHHhc-CCcEEE--ECCcCCHHHHHHHHHcCCCEEEECc
Confidence 66777888888999999885422100011 123 7888888764 556544 5566688899999999999999886
Q ss_pred hch
Q 018731 215 ETV 217 (351)
Q Consensus 215 es~ 217 (351)
+..
T Consensus 106 ~~l 108 (244)
T 1vzw_A 106 AAL 108 (244)
T ss_dssp HHH
T ss_pred hHh
Confidence 654
No 51
>1tx2_A DHPS, dihydropteroate synthase; folate biosynthesis, pterine, MA transferase; HET: 680; 1.83A {Bacillus anthracis} SCOP: c.1.21.1 PDB: 1tww_A* 1twz_A* 1tx0_A* 1tws_A* 3h21_A* 3h22_A* 3h23_A* 3h24_A* 3h26_A* 3h2a_A* 3h2c_A* 3h2e_A* 3h2f_A* 3h2m_A* 3h2n_A* 3h2o_A* 3tya_A* 3tyb_A* 3tyc_A* 3tyd_A* ...
Probab=89.55 E-value=3.8 Score=37.18 Aligned_cols=137 Identities=14% Similarity=0.157 Sum_probs=80.3
Q ss_pred CchhHHHHHHHHHhCCCcEEEEeccC--CC--CCC-CCcHHHHHHHHHHHHHhCCCcEEEEeecCCCCCHHHHHHHHHcC
Q 018731 132 DPMEPENTAKAIASWGVDYIVLTSVD--RD--DIP-DGGSGHFARTVKAMKKQKPDIMVECLTSDFRGDLRAVETLVHSG 206 (351)
Q Consensus 132 ~~eei~~~~~~~~~~G~~~I~ltgg~--~~--~l~-~~~~~~~~~li~~ik~~~p~i~i~~~~~~~~~~~e~l~~L~~aG 206 (351)
+.+++.+.+++..+.|..-|-+.|.. |. ..+ ..+.+++..+++.+++.. ++.|.+=| .+.+.++.-.++|
T Consensus 61 ~~~~a~~~a~~~v~~GAdiIDIGgeStrPga~~v~~~eE~~RvvpvI~~l~~~~-~vpiSIDT----~~~~V~~aAl~aG 135 (297)
T 1tx2_A 61 EVDAAVRHAKEMRDEGAHIIDIGGESTRPGFAKVSVEEEIKRVVPMIQAVSKEV-KLPISIDT----YKAEVAKQAIEAG 135 (297)
T ss_dssp HHHHHHHHHHHHHHTTCSEEEEESCC----CCCCCHHHHHHHHHHHHHHHHHHS-CSCEEEEC----SCHHHHHHHHHHT
T ss_pred CHHHHHHHHHHHHHcCCCEEEECCCcCCCCCCCCCHHHHHHHHHHHHHHHHhcC-CceEEEeC----CCHHHHHHHHHcC
Confidence 45778888888899999999887532 11 111 122445666668887653 44454322 2678888888888
Q ss_pred CCeeec-chhc-hHHHHhh---h---------cC-CCC------CHHHHHHHHHHHHHhCCCCe---EEEeeeeeCCCCH
Q 018731 207 LDVFAH-NIET-VKRLQRI---V---------RD-PRA------GYEQSLEVLKHAKLSKKGLI---TKSSIMLGLGESD 262 (351)
Q Consensus 207 ~~~i~~-~ies-~~~~~~~---~---------r~-~~~------~~~~~l~~i~~~~~~~~Gi~---v~~~~IvGlgEt~ 262 (351)
.+.|+- +.+. .+++.+. . ++ |.+ -.+...+.++.+.+ .|+. +-.|--+|+|.+.
T Consensus 136 a~iINdvsg~~~d~~m~~~aa~~g~~vVlmh~~G~p~y~d~v~ev~~~l~~~i~~a~~--~GI~~~~IilDPg~Gfgk~~ 213 (297)
T 1tx2_A 136 AHIINDIWGAKAEPKIAEVAAHYDVPIILMHNRDNMNYRNLMADMIADLYDSIKIAKD--AGVRDENIILDPGIGFAKTP 213 (297)
T ss_dssp CCEEEETTTTSSCTHHHHHHHHHTCCEEEECCCSCCCCSSHHHHHHHHHHHHHHHHHH--TTCCGGGEEEECCTTSSCCH
T ss_pred CCEEEECCCCCCCHHHHHHHHHhCCcEEEEeCCCCCCcchHHHHHHHHHHHHHHHHHH--cCCChhcEEEeCCCCcCCCH
Confidence 888752 2222 1122110 0 00 110 02344555666777 8886 6777667778888
Q ss_pred HHHHHHHHHHHhC
Q 018731 263 DDLKEAMADLRSI 275 (351)
Q Consensus 263 e~~~~~l~~l~~l 275 (351)
++-.++++.+.++
T Consensus 214 ~~n~~ll~~l~~l 226 (297)
T 1tx2_A 214 EQNLEAMRNLEQL 226 (297)
T ss_dssp HHHHHHHHTGGGG
T ss_pred HHHHHHHHHHHHH
Confidence 8666666666554
No 52
>1twd_A Copper homeostasis protein CUTC; TIM-like protein, structural genomics, PSI, protein structure initiative; 1.70A {Shigella flexneri} SCOP: c.1.30.1 PDB: 1x7i_A 1x8c_A
Probab=89.45 E-value=2.6 Score=37.28 Aligned_cols=121 Identities=15% Similarity=0.181 Sum_probs=73.9
Q ss_pred HHHHHHHHHhCCCcEEEEeccCCCCCCCCcHHHHHHHHHHHHHhCCCcEEEEeecCC--CCC-HHHHHHHHHcCCCeeec
Q 018731 136 PENTAKAIASWGVDYIVLTSVDRDDIPDGGSGHFARTVKAMKKQKPDIMVECLTSDF--RGD-LRAVETLVHSGLDVFAH 212 (351)
Q Consensus 136 i~~~~~~~~~~G~~~I~ltgg~~~~l~~~~~~~~~~li~~ik~~~p~i~i~~~~~~~--~~~-~e~l~~L~~aG~~~i~~ 212 (351)
+.+.++.+.+.|++.|+|.--+++--- +.+...++++... ++.++. .-.| ..+ .+.++.|.+.|+++|.-
T Consensus 75 M~~Di~~~~~~GadGvV~G~Lt~dg~i--D~~~~~~Li~~a~----~~~vTF-HRAfD~~~d~~~ale~L~~lG~~rILT 147 (256)
T 1twd_A 75 ILEDVRTVRELGFPGLVTGVLDVDGNV--DMPRMEKIMAAAG----PLAVTF-HRAFDMCANPLYTLNNLAELGIARVLT 147 (256)
T ss_dssp HHHHHHHHHHTTCSEEEECCBCTTSSB--CHHHHHHHHHHHT----TSEEEE-CGGGGGCSCHHHHHHHHHHHTCCEEEE
T ss_pred HHHHHHHHHHcCCCEEEEeeECCCCCc--CHHHHHHHHHHhC----CCcEEE-ECchhccCCHHHHHHHHHHcCCCEEEC
Confidence 456677788999999999554432222 2567777776554 334432 2212 223 47899999999999842
Q ss_pred chhchHHHHhhhcCCCCCHHHHHHHHHHHHHhCCCCeEEEeeeeeCCCCHHHHHHHHHHHHhCCCCEEeee
Q 018731 213 NIETVKRLQRIVRDPRAGYEQSLEVLKHAKLSKKGLITKSSIMLGLGESDDDLKEAMADLRSIDVDILTLG 283 (351)
Q Consensus 213 ~ies~~~~~~~~r~~~~~~~~~l~~i~~~~~~~~Gi~v~~~~IvGlgEt~e~~~~~l~~l~~lg~d~i~i~ 283 (351)
+ +...+..+-+..|+.+.+. ++ ...+|.|=|=+.+.+.+.+ +.|++.++++
T Consensus 148 S------------G~~~~a~~g~~~L~~Lv~~-a~---~i~Im~GgGv~~~Ni~~l~----~tGv~e~H~S 198 (256)
T 1twd_A 148 S------------GQKSDALQGLSKIMELIAH-RD---APIIMAGAGVRAENLHHFL----DAGVLEVHSS 198 (256)
T ss_dssp C------------TTSSSTTTTHHHHHHHHTS-SS---CCEEEEESSCCTTTHHHHH----HHTCSEEEEC
T ss_pred C------------CCCCCHHHHHHHHHHHHHh-hC---CcEEEecCCcCHHHHHHHH----HcCCCeEeEC
Confidence 1 0112333445556565542 34 4668888877777766542 5788888864
No 53
>2y88_A Phosphoribosyl isomerase A; aromatic amino acid biosynthesis, TIM-barrel, His biosynthesis, tryptophan biosynthesis; HET: 2ER; 1.33A {Mycobacterium tuberculosis} PDB: 2y89_A 2y85_A*
Probab=89.19 E-value=0.44 Score=41.65 Aligned_cols=76 Identities=14% Similarity=0.114 Sum_probs=53.2
Q ss_pred hHHHHHHHHHhCCCcEEEEeccCCCCCCCCcHHHHHHHHHHHHHhCCCcEEEEeecCCCCCHHHHHHHHHcCCCeeecch
Q 018731 135 EPENTAKAIASWGVDYIVLTSVDRDDIPDGGSGHFARTVKAMKKQKPDIMVECLTSDFRGDLRAVETLVHSGLDVFAHNI 214 (351)
Q Consensus 135 ei~~~~~~~~~~G~~~I~ltgg~~~~l~~~~~~~~~~li~~ik~~~p~i~i~~~~~~~~~~~e~l~~L~~aG~~~i~~~i 214 (351)
++.+.++.+.+.|++.+.+..-+...-.. ..+ +.++.+++.. ++.+.+ .++..+++.++.+.++|+|.|.++.
T Consensus 32 d~~~~a~~~~~~Gad~i~v~~~d~~~~~~---~~~-~~i~~i~~~~-~ipv~v--~ggi~~~~~~~~~l~~Gad~V~lg~ 104 (244)
T 2y88_A 32 SAVDAALGWQRDGAEWIHLVDLDAAFGRG---SNH-ELLAEVVGKL-DVQVEL--SGGIRDDESLAAALATGCARVNVGT 104 (244)
T ss_dssp EHHHHHHHHHHTTCSEEEEEEHHHHTTSC---CCH-HHHHHHHHHC-SSEEEE--ESSCCSHHHHHHHHHTTCSEEEECH
T ss_pred CHHHHHHHHHHcCCCEEEEEcCcccccCC---ChH-HHHHHHHHhc-CCcEEE--ECCCCCHHHHHHHHHcCCCEEEECc
Confidence 66778888888999999885422110111 124 7888888764 556544 5566688899999999999999886
Q ss_pred hch
Q 018731 215 ETV 217 (351)
Q Consensus 215 es~ 217 (351)
+..
T Consensus 105 ~~l 107 (244)
T 2y88_A 105 AAL 107 (244)
T ss_dssp HHH
T ss_pred hHh
Confidence 554
No 54
>3qja_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, T structural genomics consortium, TBSGC, lyase; 1.29A {Mycobacterium tuberculosis} PDB: 3t40_A* 3t44_A* 3t55_A* 3t78_A* 4fb7_A*
Probab=89.04 E-value=11 Score=33.58 Aligned_cols=118 Identities=13% Similarity=0.172 Sum_probs=76.1
Q ss_pred hHHHHHHHHHhCCCcEEEEeccCCCCCCCCcHHHHHHHHHHHHHhCCCcEEEEeecCCCCCHHHHHHHHHcCCCeeecch
Q 018731 135 EPENTAKAIASWGVDYIVLTSVDRDDIPDGGSGHFARTVKAMKKQKPDIMVECLTSDFRGDLRAVETLVHSGLDVFAHNI 214 (351)
Q Consensus 135 ei~~~~~~~~~~G~~~I~ltgg~~~~l~~~~~~~~~~li~~ik~~~p~i~i~~~~~~~~~~~e~l~~L~~aG~~~i~~~i 214 (351)
.+.+.++.+.+.|+..|.+..-+. + +.--.+.++.+++.. ++.+- .-++..++..++..+++|.|.|.++.
T Consensus 73 ~p~~~A~~y~~~GA~~isvltd~~--~----f~Gs~~~l~~ir~~v-~lPvl--~kdfiid~~qv~~A~~~GAD~VlLi~ 143 (272)
T 3qja_A 73 DPAKLAQAYQDGGARIVSVVTEQR--R----FQGSLDDLDAVRASV-SIPVL--RKDFVVQPYQIHEARAHGADMLLLIV 143 (272)
T ss_dssp CHHHHHHHHHHTTCSEEEEECCGG--G----HHHHHHHHHHHHHHC-SSCEE--EESCCCSHHHHHHHHHTTCSEEEEEG
T ss_pred CHHHHHHHHHHcCCCEEEEecChh--h----cCCCHHHHHHHHHhC-CCCEE--ECccccCHHHHHHHHHcCCCEEEEec
Confidence 567788888899999997643221 2 122334566666653 45543 35677788889999999999998764
Q ss_pred hchHHHHhhhcCCCCCHHHHHHHHHHHHHhCCCCeEEEeeeeeCCCCHHHHHHHHHHHHhCCCCEEeeec
Q 018731 215 ETVKRLQRIVRDPRAGYEQSLEVLKHAKLSKKGLITKSSIMLGLGESDDDLKEAMADLRSIDVDILTLGQ 284 (351)
Q Consensus 215 es~~~~~~~~r~~~~~~~~~l~~i~~~~~~~~Gi~v~~~~IvGlgEt~e~~~~~l~~l~~lg~d~i~i~~ 284 (351)
..+ +.++..+.++.+++ .|+.+- +. -.|.+++... .++|++.+.+++
T Consensus 144 a~l------------~~~~l~~l~~~a~~--lGl~~l----ve-v~t~ee~~~A----~~~Gad~IGv~~ 190 (272)
T 3qja_A 144 AAL------------EQSVLVSMLDRTES--LGMTAL----VE-VHTEQEADRA----LKAGAKVIGVNA 190 (272)
T ss_dssp GGS------------CHHHHHHHHHHHHH--TTCEEE----EE-ESSHHHHHHH----HHHTCSEEEEES
T ss_pred ccC------------CHHHHHHHHHHHHH--CCCcEE----EE-cCCHHHHHHH----HHCCCCEEEECC
Confidence 332 23344455667777 788742 22 2466665443 356999998853
No 55
>1vhc_A Putative KHG/KDPG aldolase; structural genomics, unknown function; HET: MSE; 1.89A {Haemophilus influenzae} SCOP: c.1.10.1
Probab=88.92 E-value=11 Score=32.61 Aligned_cols=112 Identities=13% Similarity=0.119 Sum_probs=74.8
Q ss_pred CCchhHHHHHHHHHhCCCcEEEEeccCCCCCCCCcHHHHHHHHHHHHHhCCCcEEEEeecCCCCCHHHHHHHHHcCCCee
Q 018731 131 PDPMEPENTAKAIASWGVDYIVLTSVDRDDIPDGGSGHFARTVKAMKKQKPDIMVECLTSDFRGDLRAVETLVHSGLDVF 210 (351)
Q Consensus 131 ~~~eei~~~~~~~~~~G~~~I~ltgg~~~~l~~~~~~~~~~li~~ik~~~p~i~i~~~~~~~~~~~e~l~~L~~aG~~~i 210 (351)
.++++..+.++.+.+.|++-|-++--+ ..-.+.++.+++.+|++.+.+-+ .++.+.++...++|.|.+
T Consensus 26 ~~~~~~~~~~~al~~gGv~~iel~~k~---------~~~~~~i~~l~~~~~~l~vgaGt---vl~~d~~~~A~~aGAd~v 93 (224)
T 1vhc_A 26 DNADDILPLADTLAKNGLSVAEITFRS---------EAAADAIRLLRANRPDFLIAAGT---VLTAEQVVLAKSSGADFV 93 (224)
T ss_dssp SSGGGHHHHHHHHHHTTCCEEEEETTS---------TTHHHHHHHHHHHCTTCEEEEES---CCSHHHHHHHHHHTCSEE
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEeccC---------chHHHHHHHHHHhCcCcEEeeCc---EeeHHHHHHHHHCCCCEE
Confidence 356788889999999999988886321 12356778888888887766533 247899999999999988
Q ss_pred ecchhchHHHHhhhcCCCCCHHHHHHHHHHHHHhCCCCeEEEeeeeeCCCCHHHHHHHHHHHHhCCCCEEeee
Q 018731 211 AHNIETVKRLQRIVRDPRAGYEQSLEVLKHAKLSKKGLITKSSIMLGLGESDDDLKEAMADLRSIDVDILTLG 283 (351)
Q Consensus 211 ~~~ies~~~~~~~~r~~~~~~~~~l~~i~~~~~~~~Gi~v~~~~IvGlgEt~e~~~~~l~~l~~lg~d~i~i~ 283 (351)
..+ ..+ .+.++.+++ .|.. +|+| -.|.+++.+ +.+.|+|.+.+|
T Consensus 94 ~~p--------------~~d----~~v~~~ar~--~g~~----~i~G-v~t~~e~~~----A~~~Gad~vk~F 137 (224)
T 1vhc_A 94 VTP--------------GLN----PKIVKLCQD--LNFP----ITPG-VNNPMAIEI----ALEMGISAVKFF 137 (224)
T ss_dssp ECS--------------SCC----HHHHHHHHH--TTCC----EECE-ECSHHHHHH----HHHTTCCEEEET
T ss_pred EEC--------------CCC----HHHHHHHHH--hCCC----EEec-cCCHHHHHH----HHHCCCCEEEEe
Confidence 432 112 234445555 5654 3445 346666544 346788888774
No 56
>3e96_A Dihydrodipicolinate synthase; structural genomics, nysgrc, target 9375C, operon, PSI-2; 1.80A {Bacillus clausii ksm-k16} SCOP: c.1.10.0
Probab=88.55 E-value=3.4 Score=37.76 Aligned_cols=97 Identities=19% Similarity=0.201 Sum_probs=62.4
Q ss_pred HHHhCCCcEEEEee---c-CCCCCH----HHHHHHHHcCCCeeecchhchHHHHhhhcCCCCCHHHHHHHHHHHHHhCCC
Q 018731 176 MKKQKPDIMVECLT---S-DFRGDL----RAVETLVHSGLDVFAHNIETVKRLQRIVRDPRAGYEQSLEVLKHAKLSKKG 247 (351)
Q Consensus 176 ik~~~p~i~i~~~~---~-~~~~~~----e~l~~L~~aG~~~i~~~ies~~~~~~~~r~~~~~~~~~l~~i~~~~~~~~G 247 (351)
++..+.++.....| . ++.+|. ..++.+.+.|++.+.+.=-|.+- ..-+.+++.+.++.+.+...|
T Consensus 8 ~~~~~~Gv~~a~vTPf~~~dg~iD~~~l~~lv~~li~~Gv~Gl~v~GtTGE~-------~~Ls~eEr~~v~~~~v~~~~g 80 (316)
T 3e96_A 8 LAKALETISGIPITPFRKSDGSIDWHHYKETVDRIVDNGIDVIVPCGNTSEF-------YALSLEEAKEEVRRTVEYVHG 80 (316)
T ss_dssp HHHHTSSEEECCCCCBCTTTCCBCHHHHHHHHHHHHTTTCCEECTTSGGGTG-------GGSCHHHHHHHHHHHHHHHTT
T ss_pred hhhcCCceEEeeeCCccCCCCCCCHHHHHHHHHHHHHcCCCEEEeCccccCc-------ccCCHHHHHHHHHHHHHHhCC
Confidence 34444465433333 3 444564 56777888899998764323221 123677778888777664333
Q ss_pred CeEEEeeeeeCCCCHHHHHHHHHHHHhCCCCEEee
Q 018731 248 LITKSSIMLGLGESDDDLKEAMADLRSIDVDILTL 282 (351)
Q Consensus 248 i~v~~~~IvGlgEt~e~~~~~l~~l~~lg~d~i~i 282 (351)
..-+|+|.|.+.++..+..+.+.++|+|.+.+
T Consensus 81 ---rvpViaGvg~~t~~ai~la~~A~~~Gadavlv 112 (316)
T 3e96_A 81 ---RALVVAGIGYATSTAIELGNAAKAAGADAVMI 112 (316)
T ss_dssp ---SSEEEEEECSSHHHHHHHHHHHHHHTCSEEEE
T ss_pred ---CCcEEEEeCcCHHHHHHHHHHHHhcCCCEEEE
Confidence 23467777558888899999999999998776
No 57
>3nav_A Tryptophan synthase alpha chain; alpha subunit, structural genomics, CSG center for structural genomics of infectious diseases; 2.10A {Vibrio cholerae o1 biovar el tor} SCOP: c.1.2.4
Probab=88.42 E-value=2.1 Score=38.38 Aligned_cols=52 Identities=6% Similarity=0.086 Sum_probs=24.6
Q ss_pred CCCHHHHHHHHHHHHHhCCCCeEEEeeeeeCCCCHH--HHHHHHHHHHhCCCCEEee
Q 018731 228 RAGYEQSLEVLKHAKLSKKGLITKSSIMLGLGESDD--DLKEAMADLRSIDVDILTL 282 (351)
Q Consensus 228 ~~~~~~~l~~i~~~~~~~~Gi~v~~~~IvGlgEt~e--~~~~~l~~l~~lg~d~i~i 282 (351)
+.+.++.++.++.+++.+..+.+- +| |+-.... -+.+.++.+.+.|+|.+-+
T Consensus 78 G~~~~~~~~~v~~~r~~~~~~Piv--lm-~Y~n~v~~~g~~~f~~~~~~aGvdGvIi 131 (271)
T 3nav_A 78 KTTPDICFELIAQIRARNPETPIG--LL-MYANLVYARGIDDFYQRCQKAGVDSVLI 131 (271)
T ss_dssp TCCHHHHHHHHHHHHHHCTTSCEE--EE-ECHHHHHHTCHHHHHHHHHHHTCCEEEE
T ss_pred CCCHHHHHHHHHHHHhcCCCCCEE--EE-ecCcHHHHHhHHHHHHHHHHCCCCEEEE
Confidence 456677777777776522233321 11 1100000 1244555666667766555
No 58
>1tqj_A Ribulose-phosphate 3-epimerase; beta-alpha barrel epimerase, isomerase; 1.60A {Synechocystis SP} SCOP: c.1.2.2
Probab=88.37 E-value=2.4 Score=36.89 Aligned_cols=154 Identities=15% Similarity=0.126 Sum_probs=81.7
Q ss_pred CchhHHHHHHHHHhCCCcEEEEeccCCCCCCCCcHHHHHHHHHHHHHhCC-CcEEEEeecCCCCCHHHHHHHHHcCCCee
Q 018731 132 DPMEPENTAKAIASWGVDYIVLTSVDRDDIPDGGSGHFARTVKAMKKQKP-DIMVECLTSDFRGDLRAVETLVHSGLDVF 210 (351)
Q Consensus 132 ~~eei~~~~~~~~~~G~~~I~ltgg~~~~l~~~~~~~~~~li~~ik~~~p-~i~i~~~~~~~~~~~e~l~~L~~aG~~~i 210 (351)
+.....+.++.+.+.|++.+.+---+.+..++ ...-.++++.+++... .+.+...+.+ .++.++.++++|.|.+
T Consensus 15 D~~~l~~~i~~~~~~Gad~ihldi~DG~fvp~--~~~g~~~v~~lr~~~~~~~~vhlmv~d---p~~~i~~~~~aGadgv 89 (230)
T 1tqj_A 15 DFSRLGEEIKAVDEAGADWIHVDVMDGRFVPN--ITIGPLIVDAIRPLTKKTLDVHLMIVE---PEKYVEDFAKAGADII 89 (230)
T ss_dssp CGGGHHHHHHHHHHTTCSEEEEEEEBSSSSSC--BCBCHHHHHHHGGGCCSEEEEEEESSS---GGGTHHHHHHHTCSEE
T ss_pred CHhHHHHHHHHHHHcCCCEEEEEEEecCCCcc--hhhhHHHHHHHHhhcCCcEEEEEEccC---HHHHHHHHHHcCCCEE
Confidence 45567778888888899976542212111221 1122377888887641 2334444432 2357899999999999
Q ss_pred ecchh--chHHHHhhhcCCCCCHHHHHHHHHHHHHhCCCCeEEEeeeeeCCCCHHHHHHHHHHHHhCCCCEEeeecccCC
Q 018731 211 AHNIE--TVKRLQRIVRDPRAGYEQSLEVLKHAKLSKKGLITKSSIMLGLGESDDDLKEAMADLRSIDVDILTLGQYLQP 288 (351)
Q Consensus 211 ~~~ie--s~~~~~~~~r~~~~~~~~~l~~i~~~~~~~~Gi~v~~~~IvGlgEt~e~~~~~l~~l~~lg~d~i~i~~~l~P 288 (351)
.+..| +.+ . ..+.++.+++ .|+.+...+ . ..|..+.. +.+.+ ++|.+.++. ..|
T Consensus 90 ~vh~e~~~~~-----------~---~~~~~~~i~~--~g~~~gv~~--~-p~t~~e~~---~~~~~-~~D~v~~ms-v~p 145 (230)
T 1tqj_A 90 SVHVEHNASP-----------H---LHRTLCQIRE--LGKKAGAVL--N-PSTPLDFL---EYVLP-VCDLILIMS-VNP 145 (230)
T ss_dssp EEECSTTTCT-----------T---HHHHHHHHHH--TTCEEEEEE--C-TTCCGGGG---TTTGG-GCSEEEEES-SCC
T ss_pred EECcccccch-----------h---HHHHHHHHHH--cCCcEEEEE--e-CCCcHHHH---HHHHh-cCCEEEEEE-ecc
Confidence 88766 321 1 2345566777 888643332 2 23443332 22222 678887753 357
Q ss_pred CCCcccccCCCCHHHHHHHHHHHHhcC
Q 018731 289 TPLHLTVKEYVTPEKFDFWKAYGESIG 315 (351)
Q Consensus 289 Tp~~~~~~~~v~~~e~~~~~~~~~~~G 315 (351)
+.... .......+.+.++++.....|
T Consensus 146 g~ggq-~~~~~~~~~i~~lr~~~~~~~ 171 (230)
T 1tqj_A 146 GFGGQ-SFIPEVLPKIRALRQMCDERG 171 (230)
T ss_dssp ----C-CCCGGGHHHHHHHHHHHHHHT
T ss_pred ccCCc-cCcHHHHHHHHHHHHHHHhcC
Confidence 32221 112223445556666654333
No 59
>3cpr_A Dihydrodipicolinate synthetase; (beta/alpha)8-barrel fold with A C-terminal alpha-helical segment, amino-acid biosynthesis, cytoplasm; HET: MCL; 2.20A {Corynebacterium glutamicum}
Probab=88.25 E-value=6.9 Score=35.48 Aligned_cols=76 Identities=21% Similarity=0.243 Sum_probs=45.5
Q ss_pred HHHHHHHHcCCCeeecchhchHHHHhhhcCCCCCHHHHHHHHHHHHHhCCCCeEEEeeeeeC-CCCHHHHHHHHHHHHhC
Q 018731 197 RAVETLVHSGLDVFAHNIETVKRLQRIVRDPRAGYEQSLEVLKHAKLSKKGLITKSSIMLGL-GESDDDLKEAMADLRSI 275 (351)
Q Consensus 197 e~l~~L~~aG~~~i~~~ies~~~~~~~~r~~~~~~~~~l~~i~~~~~~~~Gi~v~~~~IvGl-gEt~e~~~~~l~~l~~l 275 (351)
..++.+.++|++.+.+.=-|.+- ..-+.+++.+.++.+.+...| ..-+|+|. +.+.++..+..+.+.+.
T Consensus 41 ~lv~~li~~Gv~gl~v~GttGE~-------~~Ls~~Er~~v~~~~~~~~~g---rvpviaGvg~~st~~ai~la~~A~~~ 110 (304)
T 3cpr_A 41 EVAAYLVDKGLDSLVLAGTTGES-------PTTTAAEKLELLKAVREEVGD---RAKLIAGVGTNNTRTSVELAEAAASA 110 (304)
T ss_dssp HHHHHHHHTTCCEEEESSTTTTT-------TTSCHHHHHHHHHHHHHHHTT---TSEEEEECCCSCHHHHHHHHHHHHHT
T ss_pred HHHHHHHHcCCCEEEECccccCh-------hhCCHHHHHHHHHHHHHHhCC---CCcEEecCCCCCHHHHHHHHHHHHhc
Confidence 45566667788877543212111 123666666666666553233 13367777 45677777777888888
Q ss_pred CCCEEee
Q 018731 276 DVDILTL 282 (351)
Q Consensus 276 g~d~i~i 282 (351)
|+|.+.+
T Consensus 111 Gadavlv 117 (304)
T 3cpr_A 111 GADGLLV 117 (304)
T ss_dssp TCSEEEE
T ss_pred CCCEEEE
Confidence 8886655
No 60
>3vnd_A TSA, tryptophan synthase alpha chain; psychrophilic enzyme, cold adaptation; HET: PE8; 2.60A {Shewanella frigidimarina}
Probab=88.25 E-value=1.9 Score=38.55 Aligned_cols=110 Identities=14% Similarity=0.197 Sum_probs=52.2
Q ss_pred HHHHHHHHHHHhCCCcEEEEeecCC---CCCHHHHHHHHHcCCCeeecchhchH---------HH-HhhhcCCCCCHHHH
Q 018731 168 HFARTVKAMKKQKPDIMVECLTSDF---RGDLRAVETLVHSGLDVFAHNIETVK---------RL-QRIVRDPRAGYEQS 234 (351)
Q Consensus 168 ~~~~li~~ik~~~p~i~i~~~~~~~---~~~~e~l~~L~~aG~~~i~~~ies~~---------~~-~~~~r~~~~~~~~~ 234 (351)
++.+.++.+++.....-+...+.+. ..+.+.++.|.++|+|.|.+++.-.| .. .+.+. .+.+.++.
T Consensus 4 ri~~~f~~~~~~~~~ali~yi~aGdP~~~~~~~~~~~l~~~GaD~iElgiPfSDP~aDGp~Iq~a~~~AL~-~G~~~~~~ 82 (267)
T 3vnd_A 4 RYQAKFAALKAQDKGAFVPFVTIGDPSPELSLKIIQTLVDNGADALELGFPFSDPLADGPVIQGANLRSLA-AGTTSSDC 82 (267)
T ss_dssp HHHHHHHHHHHHTCCEEEEEEETTSSCHHHHHHHHHHHHHTTCSSEEEECCCSCCTTCCHHHHHHHHHHHH-TTCCHHHH
T ss_pred HHHHHHHHHHhcCCCeEEEEEeCCCCCHHHHHHHHHHHHHcCCCEEEECCCCCCCCCCCHHHHHHHHHHHH-cCCCHHHH
Confidence 4555555555543222222222221 11245666677777777766632111 11 12222 25677777
Q ss_pred HHHHHHHHHhCCCCeEEEeeeeeCCCCH-H--HHHHHHHHHHhCCCCEEee
Q 018731 235 LEVLKHAKLSKKGLITKSSIMLGLGESD-D--DLKEAMADLRSIDVDILTL 282 (351)
Q Consensus 235 l~~i~~~~~~~~Gi~v~~~~IvGlgEt~-e--~~~~~l~~l~~lg~d~i~i 282 (351)
++.++.+++.+..+.+ .+| |+ .+. . -+.+.++.+.+.|+|.+-+
T Consensus 83 ~~~v~~ir~~~~~~Pi--vlm-~Y-~npv~~~g~e~f~~~~~~aGvdgvii 129 (267)
T 3vnd_A 83 FDIITKVRAQHPDMPI--GLL-LY-ANLVFANGIDEFYTKAQAAGVDSVLI 129 (267)
T ss_dssp HHHHHHHHHHCTTCCE--EEE-EC-HHHHHHHCHHHHHHHHHHHTCCEEEE
T ss_pred HHHHHHHHhcCCCCCE--EEE-ec-CcHHHHhhHHHHHHHHHHcCCCEEEe
Confidence 7887777762223331 111 11 011 0 1245566666777777666
No 61
>3flu_A DHDPS, dihydrodipicolinate synthase; TIM barrel, beta-alpha-barrel, amino-acid biosynthesis, diaminopimelate biosynthesis; 2.00A {Neisseria meningitidis serogroup B} SCOP: c.1.10.0
Probab=88.20 E-value=6.3 Score=35.58 Aligned_cols=76 Identities=9% Similarity=0.049 Sum_probs=48.6
Q ss_pred HHHHHHHHcCCCeeecchhchHHHHhhhcCCCCCHHHHHHHHHHHHHhCCCCeEEEeeeeeC-CCCHHHHHHHHHHHHhC
Q 018731 197 RAVETLVHSGLDVFAHNIETVKRLQRIVRDPRAGYEQSLEVLKHAKLSKKGLITKSSIMLGL-GESDDDLKEAMADLRSI 275 (351)
Q Consensus 197 e~l~~L~~aG~~~i~~~ies~~~~~~~~r~~~~~~~~~l~~i~~~~~~~~Gi~v~~~~IvGl-gEt~e~~~~~l~~l~~l 275 (351)
..++.+.++|++.+.+.=-|.+- ..-+.+++.+.++.+.+...| ..-+|+|. +.+.++..+..+.+.+.
T Consensus 32 ~lv~~li~~Gv~gl~~~GttGE~-------~~Ls~~Er~~v~~~~~~~~~g---rvpviaGvg~~~t~~ai~la~~a~~~ 101 (297)
T 3flu_A 32 DLIDWHIENGTDGIVAVGTTGES-------ATLSVEEHTAVIEAVVKHVAK---RVPVIAGTGANNTVEAIALSQAAEKA 101 (297)
T ss_dssp HHHHHHHHTTCCEEEESSTTTTG-------GGSCHHHHHHHHHHHHHHHTT---SSCEEEECCCSSHHHHHHHHHHHHHT
T ss_pred HHHHHHHHcCCCEEEeCccccCc-------ccCCHHHHHHHHHHHHHHhCC---CCcEEEeCCCcCHHHHHHHHHHHHHc
Confidence 45666777888887653222211 123666777777766653333 24467788 46777888888888888
Q ss_pred CCCEEee
Q 018731 276 DVDILTL 282 (351)
Q Consensus 276 g~d~i~i 282 (351)
|+|.+.+
T Consensus 102 Gadavlv 108 (297)
T 3flu_A 102 GADYTLS 108 (297)
T ss_dssp TCSEEEE
T ss_pred CCCEEEE
Confidence 8887665
No 62
>3tsm_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, ssgcid, seattle structural GE center for infectious disease, lyase; 2.15A {Brucella melitensis} SCOP: c.1.2.0
Probab=87.96 E-value=14 Score=32.90 Aligned_cols=118 Identities=17% Similarity=0.189 Sum_probs=77.1
Q ss_pred hhHHHHHHHHHhCCCcEEEEeccCCCCCCCCcHHHHHHHHHHHHHhCCCcEEEEeecCCCCCHHHHHHHHHcCCCeeecc
Q 018731 134 MEPENTAKAIASWGVDYIVLTSVDRDDIPDGGSGHFARTVKAMKKQKPDIMVECLTSDFRGDLRAVETLVHSGLDVFAHN 213 (351)
Q Consensus 134 eei~~~~~~~~~~G~~~I~ltgg~~~~l~~~~~~~~~~li~~ik~~~p~i~i~~~~~~~~~~~e~l~~L~~aG~~~i~~~ 213 (351)
..+.+.++.+.+.|+..|.+.. ++. +..+..+++ +.+++.. ++.| +.-+|..++..+...+.+|.|.|.+.
T Consensus 79 ~dp~~~A~~y~~~GA~~IsVlt-d~~-~f~Gs~~~L----~~ir~~v-~lPV--l~Kdfi~d~~qi~ea~~~GAD~VlLi 149 (272)
T 3tsm_A 79 FDPPALAKAYEEGGAACLSVLT-DTP-SFQGAPEFL----TAARQAC-SLPA--LRKDFLFDPYQVYEARSWGADCILII 149 (272)
T ss_dssp CCHHHHHHHHHHTTCSEEEEEC-CST-TTCCCHHHH----HHHHHTS-SSCE--EEESCCCSTHHHHHHHHTTCSEEEEE
T ss_pred CCHHHHHHHHHHCCCCEEEEec-ccc-ccCCCHHHH----HHHHHhc-CCCE--EECCccCCHHHHHHHHHcCCCEEEEc
Confidence 3567788888899999996643 222 333344433 4555542 4444 34578788889999999999999775
Q ss_pred hhchHHHHhhhcCCCCCHHHHHHHHHHHHHhCCCCeEEEeeeeeCCCCHHHHHHHHHHHHhCCCCEEeee
Q 018731 214 IETVKRLQRIVRDPRAGYEQSLEVLKHAKLSKKGLITKSSIMLGLGESDDDLKEAMADLRSIDVDILTLG 283 (351)
Q Consensus 214 ies~~~~~~~~r~~~~~~~~~l~~i~~~~~~~~Gi~v~~~~IvGlgEt~e~~~~~l~~l~~lg~d~i~i~ 283 (351)
...+ +.++..+.++.+++ .|+.+-..+ .|.+|+ +.+.++|++.+.++
T Consensus 150 ~a~L------------~~~~l~~l~~~a~~--lGl~~lvev-----h~~eEl----~~A~~~ga~iIGin 196 (272)
T 3tsm_A 150 MASV------------DDDLAKELEDTAFA--LGMDALIEV-----HDEAEM----ERALKLSSRLLGVN 196 (272)
T ss_dssp TTTS------------CHHHHHHHHHHHHH--TTCEEEEEE-----CSHHHH----HHHTTSCCSEEEEE
T ss_pred cccc------------CHHHHHHHHHHHHH--cCCeEEEEe-----CCHHHH----HHHHhcCCCEEEEC
Confidence 4221 33455566677888 888643332 466665 34457899999985
No 63
>1xky_A Dihydrodipicolinate synthase; TIM barrel, , lysine biosynthesis;spine, lyase; 1.94A {Bacillus anthracis} SCOP: c.1.10.1 PDB: 1xl9_A 3hij_A*
Probab=87.82 E-value=6.5 Score=35.59 Aligned_cols=76 Identities=14% Similarity=0.230 Sum_probs=46.0
Q ss_pred HHHHHHHHcCCCeeecchhchHHHHhhhcCCCCCHHHHHHHHHHHHHhCCCCeEEEeeeeeC-CCCHHHHHHHHHHHHhC
Q 018731 197 RAVETLVHSGLDVFAHNIETVKRLQRIVRDPRAGYEQSLEVLKHAKLSKKGLITKSSIMLGL-GESDDDLKEAMADLRSI 275 (351)
Q Consensus 197 e~l~~L~~aG~~~i~~~ies~~~~~~~~r~~~~~~~~~l~~i~~~~~~~~Gi~v~~~~IvGl-gEt~e~~~~~l~~l~~l 275 (351)
..++.+.++|++.+.+.=-|.+- ..-+.+++.+.++.+.+...| ..-+|+|. +.+.++..+..+.+.++
T Consensus 37 ~lv~~li~~Gv~gl~v~GtTGE~-------~~Ls~eEr~~v~~~~~~~~~g---rvpViaGvg~~~t~~ai~la~~A~~~ 106 (301)
T 1xky_A 37 KLVNYLIDNGTTAIVVGGTTGES-------PTLTSEEKVALYRHVVSVVDK---RVPVIAGTGSNNTHASIDLTKKATEV 106 (301)
T ss_dssp HHHHHHHHTTCCEEEESSTTTTG-------GGSCHHHHHHHHHHHHHHHTT---SSCEEEECCCSCHHHHHHHHHHHHHT
T ss_pred HHHHHHHHcCCCEEEECccccCh-------hhCCHHHHHHHHHHHHHHhCC---CceEEeCCCCCCHHHHHHHHHHHHhc
Confidence 45666677788887543222111 123566666666666553233 23467777 45677777778888888
Q ss_pred CCCEEee
Q 018731 276 DVDILTL 282 (351)
Q Consensus 276 g~d~i~i 282 (351)
|+|.+.+
T Consensus 107 Gadavlv 113 (301)
T 1xky_A 107 GVDAVML 113 (301)
T ss_dssp TCSEEEE
T ss_pred CCCEEEE
Confidence 8886655
No 64
>2ehh_A DHDPS, dihydrodipicolinate synthase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.90A {Aquifex aeolicus}
Probab=87.57 E-value=6.5 Score=35.41 Aligned_cols=76 Identities=18% Similarity=0.259 Sum_probs=42.6
Q ss_pred HHHHHHHHcCCCeeecchhchHHHHhhhcCCCCCHHHHHHHHHHHHHhCCCCeEEEeeeeeC-CCCHHHHHHHHHHHHhC
Q 018731 197 RAVETLVHSGLDVFAHNIETVKRLQRIVRDPRAGYEQSLEVLKHAKLSKKGLITKSSIMLGL-GESDDDLKEAMADLRSI 275 (351)
Q Consensus 197 e~l~~L~~aG~~~i~~~ies~~~~~~~~r~~~~~~~~~l~~i~~~~~~~~Gi~v~~~~IvGl-gEt~e~~~~~l~~l~~l 275 (351)
..++.+.++|++.+.+.=-|.+- ..-+.+++.+.++.+.+...| ..-+|+|. +.+.++..+..+.+.+.
T Consensus 25 ~lv~~li~~Gv~gl~~~GttGE~-------~~Ls~~Er~~v~~~~~~~~~g---rvpviaGvg~~~t~~ai~la~~A~~~ 94 (294)
T 2ehh_A 25 NLIEFHVDNGTDAILVCGTTGES-------PTLTFEEHEKVIEFAVKRAAG---RIKVIAGTGGNATHEAVHLTAHAKEV 94 (294)
T ss_dssp HHHHHHHTTTCCEEEESSTTTTG-------GGSCHHHHHHHHHHHHHHHTT---SSEEEEECCCSCHHHHHHHHHHHHHT
T ss_pred HHHHHHHHCCCCEEEECccccCh-------hhCCHHHHHHHHHHHHHHhCC---CCcEEEecCCCCHHHHHHHHHHHHhc
Confidence 45555666777776542112111 123556666666665543233 23366777 44666677777777777
Q ss_pred CCCEEee
Q 018731 276 DVDILTL 282 (351)
Q Consensus 276 g~d~i~i 282 (351)
|+|.+.+
T Consensus 95 Gadavlv 101 (294)
T 2ehh_A 95 GADGALV 101 (294)
T ss_dssp TCSEEEE
T ss_pred CCCEEEE
Confidence 7776554
No 65
>3qze_A DHDPS, dihydrodipicolinate synthase; alpha beta barrel, cytoplasmic; 1.59A {Pseudomonas aeruginosa} PDB: 3puo_A* 3noe_A 3ps7_A* 3s8h_A
Probab=87.56 E-value=7.4 Score=35.47 Aligned_cols=76 Identities=16% Similarity=0.196 Sum_probs=49.5
Q ss_pred HHHHHHHHcCCCeeecchhchHHHHhhhcCCCCCHHHHHHHHHHHHHhCCCCeEEEeeeeeC-CCCHHHHHHHHHHHHhC
Q 018731 197 RAVETLVHSGLDVFAHNIETVKRLQRIVRDPRAGYEQSLEVLKHAKLSKKGLITKSSIMLGL-GESDDDLKEAMADLRSI 275 (351)
Q Consensus 197 e~l~~L~~aG~~~i~~~ies~~~~~~~~r~~~~~~~~~l~~i~~~~~~~~Gi~v~~~~IvGl-gEt~e~~~~~l~~l~~l 275 (351)
..++.+.+.|++.+.+.=-|.+- ..-+.+++.+.++.+.+...| ..-+|+|. +.+.++..+..+.+.+.
T Consensus 48 ~lv~~li~~Gv~Gl~v~GtTGE~-------~~Ls~~Er~~v~~~~v~~~~g---rvpViaGvg~~st~eai~la~~A~~~ 117 (314)
T 3qze_A 48 KLVDFHLQEGTNAIVAVGTTGES-------ATLDVEEHIQVIRRVVDQVKG---RIPVIAGTGANSTREAVALTEAAKSG 117 (314)
T ss_dssp HHHHHHHHHTCCEEEESSGGGTG-------GGCCHHHHHHHHHHHHHHHTT---SSCEEEECCCSSHHHHHHHHHHHHHT
T ss_pred HHHHHHHHcCCCEEEECccccCh-------hhCCHHHHHHHHHHHHHHhCC---CCcEEEeCCCcCHHHHHHHHHHHHHc
Confidence 45666777888887653222221 123667777777766653333 24467788 55778888888888889
Q ss_pred CCCEEee
Q 018731 276 DVDILTL 282 (351)
Q Consensus 276 g~d~i~i 282 (351)
|+|.+.+
T Consensus 118 Gadavlv 124 (314)
T 3qze_A 118 GADACLL 124 (314)
T ss_dssp TCSEEEE
T ss_pred CCCEEEE
Confidence 9887665
No 66
>2yxg_A DHDPS, dihydrodipicolinate synthase; MJ0244, TIM beta/alpha-barrel fold, structural genomics, NPPSFA; 2.20A {Methanocaldococcus jannaschii DSM2661}
Probab=87.48 E-value=6 Score=35.57 Aligned_cols=76 Identities=13% Similarity=0.188 Sum_probs=45.7
Q ss_pred HHHHHHHHcCCCeeecchhchHHHHhhhcCCCCCHHHHHHHHHHHHHhCCCCeEEEeeeeeC-CCCHHHHHHHHHHHHhC
Q 018731 197 RAVETLVHSGLDVFAHNIETVKRLQRIVRDPRAGYEQSLEVLKHAKLSKKGLITKSSIMLGL-GESDDDLKEAMADLRSI 275 (351)
Q Consensus 197 e~l~~L~~aG~~~i~~~ies~~~~~~~~r~~~~~~~~~l~~i~~~~~~~~Gi~v~~~~IvGl-gEt~e~~~~~l~~l~~l 275 (351)
..++.+.++|++.+.+.=-|.+- ..-+.+++.+.++.+.+...| ..-+|+|. +.+.++..+..+.+.+.
T Consensus 25 ~lv~~li~~Gv~gl~~~GttGE~-------~~Ls~~Er~~v~~~~~~~~~g---r~pviaGvg~~~t~~ai~la~~a~~~ 94 (289)
T 2yxg_A 25 ENINFLIENGVSGIVAVGTTGES-------PTLSHEEHKKVIEKVVDVVNG---RVQVIAGAGSNCTEEAIELSVFAEDV 94 (289)
T ss_dssp HHHHHHHHTTCSEEEESSTTTTG-------GGSCHHHHHHHHHHHHHHHTT---SSEEEEECCCSSHHHHHHHHHHHHHH
T ss_pred HHHHHHHHCCCCEEEECccccCh-------hhCCHHHHHHHHHHHHHHhCC---CCcEEEeCCCCCHHHHHHHHHHHHhc
Confidence 45666677788877543212111 123566666666666553233 23467777 45667777777888888
Q ss_pred CCCEEee
Q 018731 276 DVDILTL 282 (351)
Q Consensus 276 g~d~i~i 282 (351)
|+|.+.+
T Consensus 95 Gadavlv 101 (289)
T 2yxg_A 95 GADAVLS 101 (289)
T ss_dssp TCSEEEE
T ss_pred CCCEEEE
Confidence 8886655
No 67
>2vc6_A MOSA, dihydrodipicolinate synthase; DHDPS, TIM barrel, schiff base, lyase; HET: MCL; 1.95A {Sinorhizobium meliloti}
Probab=87.37 E-value=7.8 Score=34.83 Aligned_cols=76 Identities=13% Similarity=0.123 Sum_probs=46.8
Q ss_pred HHHHHHHHcCCCeeecchhchHHHHhhhcCCCCCHHHHHHHHHHHHHhCCCCeEEEeeeeeC-CCCHHHHHHHHHHHHhC
Q 018731 197 RAVETLVHSGLDVFAHNIETVKRLQRIVRDPRAGYEQSLEVLKHAKLSKKGLITKSSIMLGL-GESDDDLKEAMADLRSI 275 (351)
Q Consensus 197 e~l~~L~~aG~~~i~~~ies~~~~~~~~r~~~~~~~~~l~~i~~~~~~~~Gi~v~~~~IvGl-gEt~e~~~~~l~~l~~l 275 (351)
..++.+.+.|++.+.+.=-|.+- ..-+.+++.+.++.+.+...| ..-+|+|. +.+.++..+..+.+.+.
T Consensus 25 ~lv~~li~~Gv~gl~~~GttGE~-------~~Ls~~Er~~v~~~~~~~~~g---r~pviaGvg~~~t~~ai~la~~A~~~ 94 (292)
T 2vc6_A 25 DLVEWQIEEGSFGLVPCGTTGES-------PTLSKSEHEQVVEITIKTANG---RVPVIAGAGSNSTAEAIAFVRHAQNA 94 (292)
T ss_dssp HHHHHHHHTTCSEEETTSGGGTG-------GGSCHHHHHHHHHHHHHHHTT---SSCBEEECCCSSHHHHHHHHHHHHHT
T ss_pred HHHHHHHHcCCCEEEECccccCh-------hhCCHHHHHHHHHHHHHHhCC---CCcEEEecCCccHHHHHHHHHHHHHc
Confidence 55666777788887653222211 123666666666666653233 23467777 45677777788888888
Q ss_pred CCCEEee
Q 018731 276 DVDILTL 282 (351)
Q Consensus 276 g~d~i~i 282 (351)
|+|.+.+
T Consensus 95 Gadavlv 101 (292)
T 2vc6_A 95 GADGVLI 101 (292)
T ss_dssp TCSEEEE
T ss_pred CCCEEEE
Confidence 8887655
No 68
>3si9_A DHDPS, dihydrodipicolinate synthase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, TIM barrel; 2.10A {Bartonella henselae}
Probab=87.30 E-value=6.6 Score=35.83 Aligned_cols=76 Identities=13% Similarity=0.136 Sum_probs=45.6
Q ss_pred HHHHHHHHcCCCeeecchhchHHHHhhhcCCCCCHHHHHHHHHHHHHhCCCCeEEEeeeeeC-CCCHHHHHHHHHHHHhC
Q 018731 197 RAVETLVHSGLDVFAHNIETVKRLQRIVRDPRAGYEQSLEVLKHAKLSKKGLITKSSIMLGL-GESDDDLKEAMADLRSI 275 (351)
Q Consensus 197 e~l~~L~~aG~~~i~~~ies~~~~~~~~r~~~~~~~~~l~~i~~~~~~~~Gi~v~~~~IvGl-gEt~e~~~~~l~~l~~l 275 (351)
..++.+.+.|++.+.+.=-|.+- ..-+.+++.+.++.+.+...| ..-+|+|. +.+.++..+..+.+.++
T Consensus 47 ~li~~li~~Gv~Gl~v~GtTGE~-------~~Ls~~Er~~v~~~~v~~~~g---rvpViaGvg~~st~~ai~la~~A~~~ 116 (315)
T 3si9_A 47 NFVEWQITQGINGVSPVGTTGES-------PTLTHEEHKRIIELCVEQVAK---RVPVVAGAGSNSTSEAVELAKHAEKA 116 (315)
T ss_dssp HHHHHHHHTTCSEEECSSTTTTG-------GGSCHHHHHHHHHHHHHHHTT---SSCBEEECCCSSHHHHHHHHHHHHHT
T ss_pred HHHHHHHHcCCCEEEeCccccCc-------cccCHHHHHHHHHHHHHHhCC---CCcEEEeCCCCCHHHHHHHHHHHHhc
Confidence 45666677788877543222211 123566666666666553233 23467777 45677777777888888
Q ss_pred CCCEEee
Q 018731 276 DVDILTL 282 (351)
Q Consensus 276 g~d~i~i 282 (351)
|+|.+.+
T Consensus 117 Gadavlv 123 (315)
T 3si9_A 117 GADAVLV 123 (315)
T ss_dssp TCSEEEE
T ss_pred CCCEEEE
Confidence 8876655
No 69
>3m5v_A DHDPS, dihydrodipicolinate synthase; TIM barrel, csgid, amino-acid biosynthesis, diaminopimelate biosynthesis, lyase, lysine biosynthesis; HET: MSE; 1.80A {Campylobacter jejuni} SCOP: c.1.10.0 PDB: 3ler_A*
Probab=87.09 E-value=11 Score=34.07 Aligned_cols=77 Identities=14% Similarity=0.128 Sum_probs=48.0
Q ss_pred HHHHHHHHcCCCeeecchhchHHHHhhhcCCCCCHHHHHHHHHHHHHhCCCCeEEEeeeeeC-CCCHHHHHHHHHHHHhC
Q 018731 197 RAVETLVHSGLDVFAHNIETVKRLQRIVRDPRAGYEQSLEVLKHAKLSKKGLITKSSIMLGL-GESDDDLKEAMADLRSI 275 (351)
Q Consensus 197 e~l~~L~~aG~~~i~~~ies~~~~~~~~r~~~~~~~~~l~~i~~~~~~~~Gi~v~~~~IvGl-gEt~e~~~~~l~~l~~l 275 (351)
..++.+.+.|++.+.+.=-|.+- ..-+.+++.+.++.+.+...|- ..-+|+|. +.+.++..+..+.+.+.
T Consensus 32 ~lv~~li~~Gv~gl~v~GttGE~-------~~Ls~~Er~~v~~~~~~~~~g~--rvpviaGvg~~~t~~ai~la~~a~~~ 102 (301)
T 3m5v_A 32 RLIKRQIENGIDAVVPVGTTGES-------ATLTHEEHRTCIEIAVETCKGT--KVKVLAGAGSNATHEAVGLAKFAKEH 102 (301)
T ss_dssp HHHHHHHHTTCCEEECSSTTTTG-------GGSCHHHHHHHHHHHHHHHTTS--SCEEEEECCCSSHHHHHHHHHHHHHT
T ss_pred HHHHHHHHcCCCEEEECccccCh-------hhCCHHHHHHHHHHHHHHhCCC--CCeEEEeCCCCCHHHHHHHHHHHHHc
Confidence 56666777888887653222211 1236667777777666533341 13467777 45777778888888888
Q ss_pred CCCEEee
Q 018731 276 DVDILTL 282 (351)
Q Consensus 276 g~d~i~i 282 (351)
|+|.+.+
T Consensus 103 Gadavlv 109 (301)
T 3m5v_A 103 GADGILS 109 (301)
T ss_dssp TCSEEEE
T ss_pred CCCEEEE
Confidence 8887665
No 70
>3apt_A Methylenetetrahydrofolate reductase; TIM barrel, oxidoreductase, flavin; HET: FAD; 1.85A {Thermus thermophilus} PDB: 3apy_A* 1v93_A*
Probab=87.08 E-value=2.1 Score=39.07 Aligned_cols=111 Identities=18% Similarity=0.165 Sum_probs=68.0
Q ss_pred CCchhHHHHHHHHHhCCCcEEEEeccCCCCC-C---C--CcHHHHHHHHHHHHHhCCC-cEEEEe-ecCCC---CCH---
Q 018731 131 PDPMEPENTAKAIASWGVDYIVLTSVDRDDI-P---D--GGSGHFARTVKAMKKQKPD-IMVECL-TSDFR---GDL--- 196 (351)
Q Consensus 131 ~~~eei~~~~~~~~~~G~~~I~ltgg~~~~l-~---~--~~~~~~~~li~~ik~~~p~-i~i~~~-~~~~~---~~~--- 196 (351)
.+.+++.+.+..+.+.|++.|....|+++.. . + .++++-.+|++.|++...+ +.|.+. .|.+. .+.
T Consensus 83 ~~~~~l~~~L~~~~~~GI~niLaLrGD~p~~~g~~~~~~~~f~~a~~Lv~~ir~~~g~~f~igvA~yPE~Hp~~~~~~~d 162 (310)
T 3apt_A 83 QSRKEVAEVLHRFVESGVENLLALRGDPPRGERVFRPHPEGFRYAAELVALIRERYGDRVSVGGAAYPEGHPESESLEAD 162 (310)
T ss_dssp SCHHHHHHHHHHHHHTTCCEEEEECCCCSTTCCSCCCCTTSCSSHHHHHHHHHHHHGGGSEEEEEECTTCCTTSSCHHHH
T ss_pred CCHHHHHHHHHHHHHCCCCEEEEEcCCCCCCCCCCCCCCCCCCCHHHHHHHHHHhCCCCeEEEEEeCCCcCCCCCCHHHH
Confidence 4678888888888999999998877776432 1 1 1255677888888876323 555432 23221 122
Q ss_pred -HHHHHHHHcCCCeeecchhchHHHHhhhcCCCCCHHHHHHHHHHHHHhCCCCeEEEeeeeeC
Q 018731 197 -RAVETLVHSGLDVFAHNIETVKRLQRIVRDPRAGYEQSLEVLKHAKLSKKGLITKSSIMLGL 258 (351)
Q Consensus 197 -e~l~~L~~aG~~~i~~~ies~~~~~~~~r~~~~~~~~~l~~i~~~~~~~~Gi~v~~~~IvGl 258 (351)
+.++.=.++|.+.+. +..-++.+.+.+.++.+++ .|+. .-++.|+
T Consensus 163 ~~~Lk~Kv~aGAdf~i-------------TQ~ffD~~~~~~f~~~~r~--~Gi~--vPIi~GI 208 (310)
T 3apt_A 163 LRHFKAKVEAGLDFAI-------------TQLFFNNAHYFGFLERARR--AGIG--IPILPGI 208 (310)
T ss_dssp HHHHHHHHHHHCSEEE-------------ECCCSCHHHHHHHHHHHHH--TTCC--SCEECEE
T ss_pred HHHHHHHHHcCCCEEE-------------ecccCCHHHHHHHHHHHHH--cCCC--CeEEEEe
Confidence 233333467888651 1234677777777778877 7764 3445555
No 71
>2rfg_A Dihydrodipicolinate synthase; beta barrel, amino-acid biosynthesis, diaminopimelate biosyn lyase, lysine biosynthesis, schiff base; 1.50A {Hahella chejuensis}
Probab=86.97 E-value=6.7 Score=35.42 Aligned_cols=76 Identities=12% Similarity=0.105 Sum_probs=47.7
Q ss_pred HHHHHHHHcCCCeeecchhchHHHHhhhcCCCCCHHHHHHHHHHHHHhCCCCeEEEeeeeeC-CCCHHHHHHHHHHHHhC
Q 018731 197 RAVETLVHSGLDVFAHNIETVKRLQRIVRDPRAGYEQSLEVLKHAKLSKKGLITKSSIMLGL-GESDDDLKEAMADLRSI 275 (351)
Q Consensus 197 e~l~~L~~aG~~~i~~~ies~~~~~~~~r~~~~~~~~~l~~i~~~~~~~~Gi~v~~~~IvGl-gEt~e~~~~~l~~l~~l 275 (351)
..++.+.+.|++.+.+.=-|.+- ..-+.+++.+.++.+.+...| ..-+|+|. +.+.++..+..+.+.+.
T Consensus 25 ~lv~~li~~Gv~gi~v~GttGE~-------~~Ls~~Er~~v~~~~~~~~~g---rvpviaGvg~~~t~~ai~la~~A~~~ 94 (297)
T 2rfg_A 25 GLVDWQIKHGAHGLVPVGTTGES-------PTLTEEEHKRVVALVAEQAQG---RVPVIAGAGSNNPVEAVRYAQHAQQA 94 (297)
T ss_dssp HHHHHHHHTTCSEEECSSGGGTG-------GGSCHHHHHHHHHHHHHHHTT---SSCBEEECCCSSHHHHHHHHHHHHHH
T ss_pred HHHHHHHHcCCCEEEECccccch-------hhCCHHHHHHHHHHHHHHhCC---CCeEEEccCCCCHHHHHHHHHHHHhc
Confidence 55666777888887653222211 123666666777666653333 23467788 45777777888888888
Q ss_pred CCCEEee
Q 018731 276 DVDILTL 282 (351)
Q Consensus 276 g~d~i~i 282 (351)
|+|.+.+
T Consensus 95 Gadavlv 101 (297)
T 2rfg_A 95 GADAVLC 101 (297)
T ss_dssp TCSEEEE
T ss_pred CCCEEEE
Confidence 8887665
No 72
>2ftp_A Hydroxymethylglutaryl-COA lyase; structural genomics, PSI, protein structure initiativ midwest center for structural genomics, MCSG; 2.40A {Pseudomonas aeruginosa}
Probab=86.73 E-value=2.4 Score=38.44 Aligned_cols=126 Identities=16% Similarity=0.169 Sum_probs=79.7
Q ss_pred CCchhHHHHHHHHHhCCCcEEEEeccCCCCCCCCcHHHHHHHHHHHHHhCCCcEEEEe-ecCCCCCHHHHHHHHHcCCCe
Q 018731 131 PDPMEPENTAKAIASWGVDYIVLTSVDRDDIPDGGSGHFARTVKAMKKQKPDIMVECL-TSDFRGDLRAVETLVHSGLDV 209 (351)
Q Consensus 131 ~~~eei~~~~~~~~~~G~~~I~ltgg~~~~l~~~~~~~~~~li~~ik~~~p~i~i~~~-~~~~~~~~e~l~~L~~aG~~~ 209 (351)
.+++++.+.++.+.+.|++.|.|..-..-.. ...+.++++.+++..|++.+.+- +++.-+.......-.++|++.
T Consensus 156 ~~~~~~~~~~~~~~~~G~d~i~l~DT~G~~~----P~~~~~lv~~l~~~~~~~~l~~H~Hn~~Gla~An~laAv~aGa~~ 231 (302)
T 2ftp_A 156 VDPRQVAWVARELQQMGCYEVSLGDTIGVGT----AGATRRLIEAVASEVPRERLAGHFHDTYGQALANIYASLLEGIAV 231 (302)
T ss_dssp CCHHHHHHHHHHHHHTTCSEEEEEESSSCCC----HHHHHHHHHHHTTTSCGGGEEEEEBCTTSCHHHHHHHHHHTTCCE
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEeCCCCCcC----HHHHHHHHHHHHHhCCCCeEEEEeCCCccHHHHHHHHHHHhCCCE
Confidence 4678899999999999999999853322112 47889999999998776544432 333333455566667899999
Q ss_pred eecchhchHH--HHhhhcCCCCCHHHHHHHHHHHHHhCCCCeEEEeeeeeCCCCHHHHHHHHHHHHh
Q 018731 210 FAHNIETVKR--LQRIVRDPRAGYEQSLEVLKHAKLSKKGLITKSSIMLGLGESDDDLKEAMADLRS 274 (351)
Q Consensus 210 i~~~ies~~~--~~~~~r~~~~~~~~~l~~i~~~~~~~~Gi~v~~~~IvGlgEt~e~~~~~l~~l~~ 274 (351)
|..++-.+-+ +-..-. .....++.+..++ . .|+.+ |-+.+.+.++.+++.+
T Consensus 232 vd~tv~GlG~cp~a~gr~-GN~~~E~lv~~l~---~--~g~~~--------~idl~~l~~~~~~~~~ 284 (302)
T 2ftp_A 232 FDSSVAGLGGCPYAKGAT-GNVASEDVLYLLN---G--LEIHT--------GVDMHALVDAGQRICA 284 (302)
T ss_dssp EEEBGGGCCBCGGGTTCB-CBCBHHHHHHHHH---H--TTCBC--------CCCHHHHHHHHHHHHH
T ss_pred EEecccccCCCCCCCCCC-CChhHHHHHHHHH---h--cCCCC--------CcCHHHHHHHHHHHHH
Confidence 9877655322 111001 1236677776655 3 45542 3456677777666654
No 73
>3daq_A DHDPS, dihydrodipicolinate synthase; lysine biosynthesis, amino-ACI biosynthesis, diaminopimelate biosynthesis, lyase, schiff B; 1.45A {Staphylococcus aureus} SCOP: c.1.10.0 PDB: 3di1_A 3di0_A
Probab=86.69 E-value=7 Score=35.19 Aligned_cols=76 Identities=14% Similarity=0.179 Sum_probs=47.0
Q ss_pred HHHHHHHHcCCCeeecchhchHHHHhhhcCCCCCHHHHHHHHHHHHHhCCCCeEEEeeeeeC-CCCHHHHHHHHHHHHhC
Q 018731 197 RAVETLVHSGLDVFAHNIETVKRLQRIVRDPRAGYEQSLEVLKHAKLSKKGLITKSSIMLGL-GESDDDLKEAMADLRSI 275 (351)
Q Consensus 197 e~l~~L~~aG~~~i~~~ies~~~~~~~~r~~~~~~~~~l~~i~~~~~~~~Gi~v~~~~IvGl-gEt~e~~~~~l~~l~~l 275 (351)
..++.+.++|++.+.+.=-|.+- ..-+.+++.+.++.+.+...| ..-+|+|. +.+.++..+..+.+.++
T Consensus 27 ~lv~~li~~Gv~gl~v~GttGE~-------~~Lt~~Er~~v~~~~~~~~~g---rvpviaGvg~~~t~~ai~la~~a~~~ 96 (292)
T 3daq_A 27 AHVNFLLENNAQAIIVNGTTAES-------PTLTTDEKELILKTVIDLVDK---RVPVIAGTGTNDTEKSIQASIQAKAL 96 (292)
T ss_dssp HHHHHHHHTTCCEEEESSGGGTG-------GGSCHHHHHHHHHHHHHHHTT---SSCEEEECCCSCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHcCCCEEEECcccccc-------ccCCHHHHHHHHHHHHHHhCC---CCcEEEeCCcccHHHHHHHHHHHHHc
Confidence 56666777888887653222221 123566666666666553222 23467777 46677777888888888
Q ss_pred CCCEEee
Q 018731 276 DVDILTL 282 (351)
Q Consensus 276 g~d~i~i 282 (351)
|+|.+.+
T Consensus 97 Gadavlv 103 (292)
T 3daq_A 97 GADAIML 103 (292)
T ss_dssp TCSEEEE
T ss_pred CCCEEEE
Confidence 8887665
No 74
>1f6k_A N-acetylneuraminate lyase; beta barrel; 1.60A {Haemophilus influenzae} SCOP: c.1.10.1 PDB: 1f5z_A 1f6p_A 1f73_A* 1f74_A* 1f7b_A*
Probab=86.65 E-value=8 Score=34.78 Aligned_cols=76 Identities=13% Similarity=0.065 Sum_probs=48.9
Q ss_pred HHHHHHHH-cCCCeeecchhchHHHHhhhcCCCCCHHHHHHHHHHHHHhCCCCeEEEeeeeeC-CCCHHHHHHHHHHHHh
Q 018731 197 RAVETLVH-SGLDVFAHNIETVKRLQRIVRDPRAGYEQSLEVLKHAKLSKKGLITKSSIMLGL-GESDDDLKEAMADLRS 274 (351)
Q Consensus 197 e~l~~L~~-aG~~~i~~~ies~~~~~~~~r~~~~~~~~~l~~i~~~~~~~~Gi~v~~~~IvGl-gEt~e~~~~~l~~l~~ 274 (351)
..++.+.+ +|++.+.+.=-|.+- ..-+.+++.+.++.+.+...| ..-+|+|. +.+.++..+..+.+.+
T Consensus 28 ~lv~~li~~~Gv~gl~~~GttGE~-------~~Ls~~Er~~v~~~~~~~~~g---rvpviaGvg~~~t~~ai~la~~a~~ 97 (293)
T 1f6k_A 28 QIIRHNIDKMKVDGLYVGGSTGEN-------FMLSTEEKKEIFRIAKDEAKD---QIALIAQVGSVNLKEAVELGKYATE 97 (293)
T ss_dssp HHHHHHHHTSCCSEEEESSGGGTG-------GGSCHHHHHHHHHHHHHHHTT---SSEEEEECCCSCHHHHHHHHHHHHH
T ss_pred HHHHHHHhhCCCcEEEeCccccch-------hhCCHHHHHHHHHHHHHHhCC---CCeEEEecCCCCHHHHHHHHHHHHh
Confidence 55666777 888887653222221 123666777777766653333 23467888 5577778888888888
Q ss_pred CCCCEEee
Q 018731 275 IDVDILTL 282 (351)
Q Consensus 275 lg~d~i~i 282 (351)
+|+|.+.+
T Consensus 98 ~Gadavlv 105 (293)
T 1f6k_A 98 LGYDCLSA 105 (293)
T ss_dssp HTCSEEEE
T ss_pred cCCCEEEE
Confidence 88887665
No 75
>3d0c_A Dihydrodipicolinate synthase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI-2, structural genomics; 1.90A {Oceanobacillus iheyensis HTE831}
Probab=86.52 E-value=7.5 Score=35.43 Aligned_cols=101 Identities=20% Similarity=0.269 Sum_probs=63.6
Q ss_pred HHHHHHHHcCCCeeecchhchHHHHhhhcCCCCCHHHHHHHHHHHHHhCCCCeEEEeeeeeCCCCHHHHHHHHHHHHhCC
Q 018731 197 RAVETLVHSGLDVFAHNIETVKRLQRIVRDPRAGYEQSLEVLKHAKLSKKGLITKSSIMLGLGESDDDLKEAMADLRSID 276 (351)
Q Consensus 197 e~l~~L~~aG~~~i~~~ies~~~~~~~~r~~~~~~~~~l~~i~~~~~~~~Gi~v~~~~IvGlgEt~e~~~~~l~~l~~lg 276 (351)
..++.+.+.|++.+.+.=-|.+- ..-+.+++.+.++.+.+...| ..-+|+|.|.+.++..+..+.+.+.|
T Consensus 37 ~lv~~li~~Gv~gl~v~GtTGE~-------~~Ls~eEr~~vi~~~~~~~~g---rvpViaGvg~st~~ai~la~~A~~~G 106 (314)
T 3d0c_A 37 DNVEFLLQNGIEVIVPNGNTGEF-------YALTIEEAKQVATRVTELVNG---RATVVAGIGYSVDTAIELGKSAIDSG 106 (314)
T ss_dssp HHHHHHHHTTCSEECTTSGGGTG-------GGSCHHHHHHHHHHHHHHHTT---SSEEEEEECSSHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHcCCCEEEECcccCCh-------hhCCHHHHHHHHHHHHHHhCC---CCeEEecCCcCHHHHHHHHHHHHHcC
Confidence 56677888899998653222221 124677777777777653333 23477888338888889999999999
Q ss_pred CCEEeeecccCCCCCcccccCCCCHHH-HHHHHHHHHhcCc
Q 018731 277 VDILTLGQYLQPTPLHLTVKEYVTPEK-FDFWKAYGESIGF 316 (351)
Q Consensus 277 ~d~i~i~~~l~PTp~~~~~~~~v~~~e-~~~~~~~~~~~G~ 316 (351)
+|.+.+. +|.+.. .+.++ +..++++++..+.
T Consensus 107 adavlv~-----~P~y~~----~s~~~l~~~f~~va~a~~l 138 (314)
T 3d0c_A 107 ADCVMIH-----QPVHPY----ITDAGAVEYYRNIIEALDA 138 (314)
T ss_dssp CSEEEEC-----CCCCSC----CCHHHHHHHHHHHHHHSSS
T ss_pred CCEEEEC-----CCCCCC----CCHHHHHHHHHHHHHhCCC
Confidence 9987662 233311 23333 4456667766543
No 76
>3ctl_A D-allulose-6-phosphate 3-epimerase; D-glucitol 6-phosphate, (beta/alpha)8 barrel, carbohydrate metabolism, isomerase; HET: S6P; 2.20A {Escherichia coli} PDB: 3ct7_A*
Probab=86.21 E-value=6.7 Score=34.10 Aligned_cols=148 Identities=14% Similarity=0.103 Sum_probs=80.0
Q ss_pred CchhHHHHHHHHHhCCCcEEEE--eccC-CCCCCCCcHHHHHHHHHHHHHhC-CCcEEEEeecCCCCCHHHHHHHHHcCC
Q 018731 132 DPMEPENTAKAIASWGVDYIVL--TSVD-RDDIPDGGSGHFARTVKAMKKQK-PDIMVECLTSDFRGDLRAVETLVHSGL 207 (351)
Q Consensus 132 ~~eei~~~~~~~~~~G~~~I~l--tgg~-~~~l~~~~~~~~~~li~~ik~~~-p~i~i~~~~~~~~~~~e~l~~L~~aG~ 207 (351)
+...+.+.++.+ +.|++.+.+ -.|. .+.+.- + ..+++.+++.. ..+.++..+.+ .+..++.+.++|.
T Consensus 11 D~~~l~~~i~~~-~~gad~lHvDvmDG~fvpn~t~-G----~~~v~~lr~~~~~~~dvhLmv~d---p~~~i~~~~~aGA 81 (231)
T 3ctl_A 11 DLLKFKEQIEFI-DSHADYFHIDIMDGHFVPNLTL-S----PFFVSQVKKLATKPLDCHLMVTR---PQDYIAQLARAGA 81 (231)
T ss_dssp CGGGHHHHHHHH-HTTCSCEEEEEECSSSSSCCCB-C----HHHHHHHHTTCCSCEEEEEESSC---GGGTHHHHHHHTC
T ss_pred ChhhHHHHHHHH-HcCCCEEEEEEEeCccCccchh-c----HHHHHHHHhccCCcEEEEEEecC---HHHHHHHHHHcCC
Confidence 445667778787 888886533 3333 223331 2 35777888753 12345554432 2346899999999
Q ss_pred Ceeecchhc-hHHHHhhhcCCCCCHHHHHHHHHHHHHhCCCCeEEEeeeeeCCCCHHHHHHHHHHHHhCCCCEEeeeccc
Q 018731 208 DVFAHNIET-VKRLQRIVRDPRAGYEQSLEVLKHAKLSKKGLITKSSIMLGLGESDDDLKEAMADLRSIDVDILTLGQYL 286 (351)
Q Consensus 208 ~~i~~~ies-~~~~~~~~r~~~~~~~~~l~~i~~~~~~~~Gi~v~~~~IvGlgEt~e~~~~~l~~l~~lg~d~i~i~~~l 286 (351)
|.+.+..|+ .+ +. .+.++.+++ .|+++...+ ..+...+.+.+.+ + ++|.+-++ -.
T Consensus 82 d~itvh~Ea~~~-----------~~---~~~i~~i~~--~G~k~gv~l--np~tp~~~~~~~l----~-~~D~Vlvm-sV 137 (231)
T 3ctl_A 82 DFITLHPETING-----------QA---FRLIDEIRR--HDMKVGLIL--NPETPVEAMKYYI----H-KADKITVM-TV 137 (231)
T ss_dssp SEEEECGGGCTT-----------TH---HHHHHHHHH--TTCEEEEEE--CTTCCGGGGTTTG----G-GCSEEEEE-SS
T ss_pred CEEEECcccCCc-----------cH---HHHHHHHHH--cCCeEEEEE--ECCCcHHHHHHHH----h-cCCEEEEe-ee
Confidence 999987766 31 22 255667777 898754443 2232223322222 2 58888775 33
Q ss_pred CC-CCCcccccCCCCHHHHHHHHHHHHhc
Q 018731 287 QP-TPLHLTVKEYVTPEKFDFWKAYGESI 314 (351)
Q Consensus 287 ~P-Tp~~~~~~~~v~~~e~~~~~~~~~~~ 314 (351)
.| +..+ .......+...++++.....
T Consensus 138 ~pGfggQ--~f~~~~l~kI~~lr~~~~~~ 164 (231)
T 3ctl_A 138 DPGFAGQ--PFIPEMLDKLAELKAWRERE 164 (231)
T ss_dssp CTTCSSC--CCCTTHHHHHHHHHHHHHHH
T ss_pred ccCcCCc--cccHHHHHHHHHHHHHHhcc
Confidence 56 3222 11112233445566555443
No 77
>3fkr_A L-2-keto-3-deoxyarabonate dehydratase; DHDPS/NAL family, complex, pyruvate, lyase; HET: KPI; 1.80A {Azospirillum brasilense} PDB: 3fkk_A
Probab=86.16 E-value=9.3 Score=34.68 Aligned_cols=76 Identities=9% Similarity=0.070 Sum_probs=37.8
Q ss_pred HHHHHHHHcCCCeeecchhchHHHHhhhcCCCCCHHHHHHHHHHHHHhCCCCeEEEeeeeeC-CCCHHHHHHHHHHHHhC
Q 018731 197 RAVETLVHSGLDVFAHNIETVKRLQRIVRDPRAGYEQSLEVLKHAKLSKKGLITKSSIMLGL-GESDDDLKEAMADLRSI 275 (351)
Q Consensus 197 e~l~~L~~aG~~~i~~~ies~~~~~~~~r~~~~~~~~~l~~i~~~~~~~~Gi~v~~~~IvGl-gEt~e~~~~~l~~l~~l 275 (351)
..++.+.++|++.+.+.=-|.+- ..-+.++..+.++.+.+...| ..-+|+|. +.+.++..+..+.+.+.
T Consensus 33 ~lv~~li~~Gv~gl~v~GtTGE~-------~~Ls~~Er~~v~~~~~~~~~g---rvpviaGvg~~~t~~ai~la~~A~~~ 102 (309)
T 3fkr_A 33 RAVDFMIDAGSDGLCILANFSEQ-------FAITDDERDVLTRTILEHVAG---RVPVIVTTSHYSTQVCAARSLRAQQL 102 (309)
T ss_dssp HHHHHHHHTTCSCEEESSGGGTG-------GGSCHHHHHHHHHHHHHHHTT---SSCEEEECCCSSHHHHHHHHHHHHHT
T ss_pred HHHHHHHHcCCCEEEECccccCc-------ccCCHHHHHHHHHHHHHHhCC---CCcEEEecCCchHHHHHHHHHHHHHc
Confidence 44555556666665542112111 022455555555555442222 13355666 34555666666666666
Q ss_pred CCCEEee
Q 018731 276 DVDILTL 282 (351)
Q Consensus 276 g~d~i~i 282 (351)
|+|.+.+
T Consensus 103 Gadavlv 109 (309)
T 3fkr_A 103 GAAMVMA 109 (309)
T ss_dssp TCSEEEE
T ss_pred CCCEEEE
Confidence 6665544
No 78
>3h5d_A DHDPS, dihydrodipicolinate synthase; lysine biosynthesis, amino-ACI biosynthesis, schiff base, cytoplasm, diaminopimelate biosy lyase; HET: MES; 1.99A {Streptococcus pneumoniae}
Probab=86.14 E-value=17 Score=33.04 Aligned_cols=77 Identities=14% Similarity=0.157 Sum_probs=49.7
Q ss_pred HHHHHHHHHcCCCeeecchhchHHHHhhhcCCCCCHHHHHHHHHHHHHhCCCCeEEEeeeeeC-CCCHHHHHHHHHHHHh
Q 018731 196 LRAVETLVHSGLDVFAHNIETVKRLQRIVRDPRAGYEQSLEVLKHAKLSKKGLITKSSIMLGL-GESDDDLKEAMADLRS 274 (351)
Q Consensus 196 ~e~l~~L~~aG~~~i~~~ies~~~~~~~~r~~~~~~~~~l~~i~~~~~~~~Gi~v~~~~IvGl-gEt~e~~~~~l~~l~~ 274 (351)
...++.+.++|++.+.+.=-|.+- ..-+.+++.+.++.+.+...| ..-+|+|. +.+.++..+..+.+.+
T Consensus 31 ~~lv~~li~~Gv~Gl~v~GtTGE~-------~~Ls~~Er~~v~~~~~~~~~g---rvpViaGvg~~~t~~ai~la~~A~~ 100 (311)
T 3h5d_A 31 PALIEHLLAHHTDGILLAGTTAES-------PTLTHDEELELFAAVQKVVNG---RVPLIAGVGTNDTRDSIEFVKEVAE 100 (311)
T ss_dssp HHHHHHHHHTTCCCEEESSTTTTG-------GGSCHHHHHHHHHHHHHHSCS---SSCEEEECCCSSHHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCCEEEECccccCh-------hhCCHHHHHHHHHHHHHHhCC---CCcEEEeCCCcCHHHHHHHHHHHHh
Confidence 467777788888887653222211 123677777777777664333 24567777 4567777888888888
Q ss_pred CCC-CEEee
Q 018731 275 IDV-DILTL 282 (351)
Q Consensus 275 lg~-d~i~i 282 (351)
+|. |.+.+
T Consensus 101 ~Ga~davlv 109 (311)
T 3h5d_A 101 FGGFAAGLA 109 (311)
T ss_dssp SCCCSEEEE
T ss_pred cCCCcEEEE
Confidence 885 86655
No 79
>3l21_A DHDPS, dihydrodipicolinate synthase; DAPA, dimer, RV2753C, lysine biosynthesis, amino-acid biosynthesis, diaminopimelate biosynthesis; HET: KPI CME; 2.10A {Mycobacterium tuberculosis} SCOP: c.1.10.1 PDB: 1xxx_A
Probab=86.11 E-value=6 Score=35.88 Aligned_cols=76 Identities=14% Similarity=0.128 Sum_probs=48.2
Q ss_pred HHHHHHHHcCCCeeecchhchHHHHhhhcCCCCCHHHHHHHHHHHHHhCCCCeEEEeeeeeC-CCCHHHHHHHHHHHHhC
Q 018731 197 RAVETLVHSGLDVFAHNIETVKRLQRIVRDPRAGYEQSLEVLKHAKLSKKGLITKSSIMLGL-GESDDDLKEAMADLRSI 275 (351)
Q Consensus 197 e~l~~L~~aG~~~i~~~ies~~~~~~~~r~~~~~~~~~l~~i~~~~~~~~Gi~v~~~~IvGl-gEt~e~~~~~l~~l~~l 275 (351)
..++.+.+.|++.+.+.=-|.+- ..-+.+++.+.++.+.+...| ..-+|+|. +.+.++..+..+.+.++
T Consensus 40 ~lv~~li~~Gv~gi~v~GttGE~-------~~Lt~~Er~~v~~~~~~~~~g---rvpviaGvg~~~t~~ai~la~~a~~~ 109 (304)
T 3l21_A 40 RLANHLVDQGCDGLVVSGTTGES-------PTTTDGEKIELLRAVLEAVGD---RARVIAGAGTYDTAHSIRLAKACAAE 109 (304)
T ss_dssp HHHHHHHHTTCSEEEESSTTTTG-------GGSCHHHHHHHHHHHHHHHTT---TSEEEEECCCSCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHcCCCEEEeCccccch-------hhCCHHHHHHHHHHHHHHhCC---CCeEEEeCCCCCHHHHHHHHHHHHHc
Confidence 56666777888887653222211 123666777777766653233 23467777 56777888888888888
Q ss_pred CCCEEee
Q 018731 276 DVDILTL 282 (351)
Q Consensus 276 g~d~i~i 282 (351)
|+|.+.+
T Consensus 110 Gadavlv 116 (304)
T 3l21_A 110 GAHGLLV 116 (304)
T ss_dssp TCSEEEE
T ss_pred CCCEEEE
Confidence 8887665
No 80
>3tak_A DHDPS, dihydrodipicolinate synthase; TIM barrel, lysine biosynthesis, pyruvate, lyase; 1.42A {Acinetobacter baumannii} PDB: 3pud_A* 3pue_A* 3pul_A 3rk8_A 3tce_A* 3tdf_A 3u8g_A 3uqn_A 4dxv_A
Probab=85.96 E-value=7.7 Score=34.87 Aligned_cols=76 Identities=17% Similarity=0.179 Sum_probs=47.0
Q ss_pred HHHHHHHHcCCCeeecchhchHHHHhhhcCCCCCHHHHHHHHHHHHHhCCCCeEEEeeeeeC-CCCHHHHHHHHHHHHhC
Q 018731 197 RAVETLVHSGLDVFAHNIETVKRLQRIVRDPRAGYEQSLEVLKHAKLSKKGLITKSSIMLGL-GESDDDLKEAMADLRSI 275 (351)
Q Consensus 197 e~l~~L~~aG~~~i~~~ies~~~~~~~~r~~~~~~~~~l~~i~~~~~~~~Gi~v~~~~IvGl-gEt~e~~~~~l~~l~~l 275 (351)
..++.+.+.|++.+.+.=-|.+- ..-+.+++.+.++.+.+...| ..-+|+|. +.+.++..+..+.+.++
T Consensus 26 ~lv~~li~~Gv~gl~~~GttGE~-------~~Ls~~Er~~v~~~~~~~~~g---r~pviaGvg~~~t~~ai~la~~a~~~ 95 (291)
T 3tak_A 26 KLVEWHIEQGTNSIVAVGTTGEA-------STLSMEEHTQVIKEIIRVANK---RIPIIAGTGANSTREAIELTKAAKDL 95 (291)
T ss_dssp HHHHHHHHHTCCEEEESSTTTTG-------GGSCHHHHHHHHHHHHHHHTT---SSCEEEECCCSSHHHHHHHHHHHHHH
T ss_pred HHHHHHHHCCCCEEEECcccccc-------ccCCHHHHHHHHHHHHHHhCC---CCeEEEeCCCCCHHHHHHHHHHHHhc
Confidence 45666677788877543222211 123666777777666653233 24467777 45777777888888888
Q ss_pred CCCEEee
Q 018731 276 DVDILTL 282 (351)
Q Consensus 276 g~d~i~i 282 (351)
|+|.+.+
T Consensus 96 Gadavlv 102 (291)
T 3tak_A 96 GADAALL 102 (291)
T ss_dssp TCSEEEE
T ss_pred CCCEEEE
Confidence 8887655
No 81
>1mxs_A KDPG aldolase; 2-keto-3-deoxy-6-phosphogluconate aldolase, sulfate, beta-BA lyase; 2.20A {Pseudomonas putida} SCOP: c.1.10.1
Probab=85.94 E-value=16 Score=31.47 Aligned_cols=111 Identities=14% Similarity=0.134 Sum_probs=73.0
Q ss_pred CchhHHHHHHHHHhCCCcEEEEeccCCCCCCCCcHHHHHHHHHHHHHhCCCcEEEEeecCCCCCHHHHHHHHHcCCCeee
Q 018731 132 DPMEPENTAKAIASWGVDYIVLTSVDRDDIPDGGSGHFARTVKAMKKQKPDIMVECLTSDFRGDLRAVETLVHSGLDVFA 211 (351)
Q Consensus 132 ~~eei~~~~~~~~~~G~~~I~ltgg~~~~l~~~~~~~~~~li~~ik~~~p~i~i~~~~~~~~~~~e~l~~L~~aG~~~i~ 211 (351)
+.++..+.++++.+.|++-|-++--+ ..-.+.++.+++.+|++.+.+-+ . ++.+.++...++|.+.+.
T Consensus 36 ~~~~~~~~~~al~~gGv~~iel~~k~---------~~~~~~i~~l~~~~~~~~igagt--v-l~~d~~~~A~~aGAd~v~ 103 (225)
T 1mxs_A 36 REEDILPLADALAAGGIRTLEVTLRS---------QHGLKAIQVLREQRPELCVGAGT--V-LDRSMFAAVEAAGAQFVV 103 (225)
T ss_dssp CGGGHHHHHHHHHHTTCCEEEEESSS---------THHHHHHHHHHHHCTTSEEEEEC--C-CSHHHHHHHHHHTCSSEE
T ss_pred CHHHHHHHHHHHHHCCCCEEEEecCC---------ccHHHHHHHHHHhCcccEEeeCe--E-eeHHHHHHHHHCCCCEEE
Confidence 56778889999999999988886211 23456788888888887776543 2 478999999999999885
Q ss_pred cchhchHHHHhhhcCCCCCHHHHHHHHHHHHHhCCCCeEEEeeeeeCCCCHHHHHHHHHHHHhCCCCEEeee
Q 018731 212 HNIETVKRLQRIVRDPRAGYEQSLEVLKHAKLSKKGLITKSSIMLGLGESDDDLKEAMADLRSIDVDILTLG 283 (351)
Q Consensus 212 ~~ies~~~~~~~~r~~~~~~~~~l~~i~~~~~~~~Gi~v~~~~IvGlgEt~e~~~~~l~~l~~lg~d~i~i~ 283 (351)
.+. .+ .+.++.+++ .|+. +|.| -.|.+++.+ ..+.|+|.+.+|
T Consensus 104 ~p~--------------~d----~~v~~~~~~--~g~~----~i~G-~~t~~e~~~----A~~~Gad~vk~F 146 (225)
T 1mxs_A 104 TPG--------------IT----EDILEAGVD--SEIP----LLPG-ISTPSEIMM----GYALGYRRFKLF 146 (225)
T ss_dssp CSS--------------CC----HHHHHHHHH--CSSC----EECE-ECSHHHHHH----HHTTTCCEEEET
T ss_pred eCC--------------CC----HHHHHHHHH--hCCC----EEEe-eCCHHHHHH----HHHCCCCEEEEc
Confidence 431 11 133344444 5543 3445 345555433 336777777763
No 82
>3hbl_A Pyruvate carboxylase; TIM barrel, ligase; HET: BTI ADP; 2.71A {Staphylococcus aureus subsp} PDB: 3bg5_A* 3ho8_A* 4hnu_A* 4hnt_A* 4hnv_A* 3hb9_A*
Probab=85.81 E-value=26 Score=37.88 Aligned_cols=134 Identities=15% Similarity=0.126 Sum_probs=84.3
Q ss_pred CCchhHHHHHHHHHhC--CCcEEEEeccCC-----CCCCCCcHHHHHHHHHHHHHhCCCcEEEEeec--CCCC-------
Q 018731 131 PDPMEPENTAKAIASW--GVDYIVLTSVDR-----DDIPDGGSGHFARTVKAMKKQKPDIMVECLTS--DFRG------- 194 (351)
Q Consensus 131 ~~~eei~~~~~~~~~~--G~~~I~ltgg~~-----~~l~~~~~~~~~~li~~ik~~~p~i~i~~~~~--~~~~------- 194 (351)
++.++.+++++.+.+. |+..+-..||.. +.+.. .=.+.++.+++..|+..+.++.. +...
T Consensus 552 ~~~~~kl~ia~~L~~~~~G~~~lE~~Gga~~e~~~~~~~e----~~~e~l~~l~~~~~~~~~~~l~R~~n~vgy~~~pd~ 627 (1150)
T 3hbl_A 552 VRTKDMINIASKTADVFKDGFSLEMWGGATFDVAYNFLKE----NPWERLERLRKAIPNVLFQMLLRASNAVGYKNYPDN 627 (1150)
T ss_dssp CCHHHHHHHHHHHHHHTTTCSEEEEEETTHHHHHHHTSCC----CHHHHHHHHHHHCCSSEEEEEEETTTBTCSSCCCHH
T ss_pred CCHHHHHHHHHHHHHhhCCCcEEeecCCceEEecccccCC----CHHHHHHHHHHhCCCCeEEEEeccccccccccCCch
Confidence 5567888888888887 999988877652 11221 22356677777778887766542 2110
Q ss_pred -CHHHHHHHHHcCCCeeecchhchHHHHhhhcCCCCCHHHHHHHHHHHHHhCCCCeEEEeeeee---C------CCCHHH
Q 018731 195 -DLRAVETLVHSGLDVFAHNIETVKRLQRIVRDPRAGYEQSLEVLKHAKLSKKGLITKSSIMLG---L------GESDDD 264 (351)
Q Consensus 195 -~~e~l~~L~~aG~~~i~~~ies~~~~~~~~r~~~~~~~~~l~~i~~~~~~~~Gi~v~~~~IvG---l------gEt~e~ 264 (351)
..+.++..+++|++.+.+.. +.++ .....+.++.+++ .|..+...+.+- + ..+.+.
T Consensus 628 v~~~~v~~a~~~Gvd~irif~-~~sd-----------~~~~~~~~~~~~e--~g~~~~~~i~~~~~~~~pe~~~~~~~~~ 693 (1150)
T 3hbl_A 628 VIHKFVQESAKAGIDVFRIFD-SLNW-----------VDQMKVANEAVQE--AGKISEGTICYTGDILNPERSNIYTLEY 693 (1150)
T ss_dssp HHHHHHHHHHHTTCCEEEEEC-TTCC-----------GGGGHHHHHHHHH--TTCEEEEEEECCSCTTCTTTCSSSSHHH
T ss_pred hHHHHHHHHHhCCcCEEEEEe-eCCH-----------HHHHHHHHHHHHH--HhhheeEEEeecccccChhhcCCCCHHH
Confidence 24568889999999986532 1122 1222344555666 676554444332 2 145677
Q ss_pred HHHHHHHHHhCCCCEEee
Q 018731 265 LKEAMADLRSIDVDILTL 282 (351)
Q Consensus 265 ~~~~l~~l~~lg~d~i~i 282 (351)
+.+.++.+.++|++.+.+
T Consensus 694 ~~~~a~~~~~~Ga~~i~l 711 (1150)
T 3hbl_A 694 YVKLAKELEREGFHILAI 711 (1150)
T ss_dssp HHHHHHHHHHTTCSEEEE
T ss_pred HHHHHHHHHHcCCCeeeE
Confidence 888888888899888777
No 83
>1o5k_A DHDPS, dihydrodipicolinate synthase; TM1521, structural genomics, J protein structure initiative, joint center for structural G lyase; HET: MCL; 1.80A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 3pb2_A 3pb0_A
Probab=85.78 E-value=7 Score=35.47 Aligned_cols=76 Identities=12% Similarity=0.184 Sum_probs=43.9
Q ss_pred HHHHHHHHcCCCeeecchhchHHHHhhhcCCCCCHHHHHHHHHHHHHhCCCCeEEEeeeeeC-CCCHHHHHHHHHHHHhC
Q 018731 197 RAVETLVHSGLDVFAHNIETVKRLQRIVRDPRAGYEQSLEVLKHAKLSKKGLITKSSIMLGL-GESDDDLKEAMADLRSI 275 (351)
Q Consensus 197 e~l~~L~~aG~~~i~~~ies~~~~~~~~r~~~~~~~~~l~~i~~~~~~~~Gi~v~~~~IvGl-gEt~e~~~~~l~~l~~l 275 (351)
..++.+.++|++.+.+.=-|.+- ..-+.+++.+.++.+.+...| ..-+|+|. +.+.++..+..+.+.+.
T Consensus 37 ~lv~~li~~Gv~gl~v~GtTGE~-------~~Ls~eEr~~vi~~~~~~~~g---rvpViaGvg~~st~~ai~la~~A~~~ 106 (306)
T 1o5k_A 37 RLVRYQLENGVNALIVLGTTGES-------PTVNEDEREKLVSRTLEIVDG---KIPVIVGAGTNSTEKTLKLVKQAEKL 106 (306)
T ss_dssp HHHHHHHHTTCCEEEESSGGGTG-------GGCCHHHHHHHHHHHHHHHTT---SSCEEEECCCSCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHcCCCEEEeCccccch-------hhCCHHHHHHHHHHHHHHhCC---CCeEEEcCCCccHHHHHHHHHHHHhc
Confidence 45566667788776543222211 123556666666666543223 23466777 45667777777777777
Q ss_pred CCCEEee
Q 018731 276 DVDILTL 282 (351)
Q Consensus 276 g~d~i~i 282 (351)
|+|.+.+
T Consensus 107 Gadavlv 113 (306)
T 1o5k_A 107 GANGVLV 113 (306)
T ss_dssp TCSEEEE
T ss_pred CCCEEEE
Confidence 8776554
No 84
>3b4u_A Dihydrodipicolinate synthase; structural genomics, PSI-2, MC protein structure initiative, midwest center for structural genomics; 1.20A {Agrobacterium tumefaciens str}
Probab=85.74 E-value=9.7 Score=34.28 Aligned_cols=76 Identities=16% Similarity=0.107 Sum_probs=44.3
Q ss_pred HHHHHHHHcCCCeeecchhchHHHHhhhcCCCCCHHHHHHHHHHHHHhCCCCeEEEeeeeeC-CCCHHHHHHHHHHHHhC
Q 018731 197 RAVETLVHSGLDVFAHNIETVKRLQRIVRDPRAGYEQSLEVLKHAKLSKKGLITKSSIMLGL-GESDDDLKEAMADLRSI 275 (351)
Q Consensus 197 e~l~~L~~aG~~~i~~~ies~~~~~~~~r~~~~~~~~~l~~i~~~~~~~~Gi~v~~~~IvGl-gEt~e~~~~~l~~l~~l 275 (351)
..++.+.++|++.+.+.=-|.+- ..-+.+++.+.++.+.+...| ..-+|+|. +.+.++..+..+.+.+.
T Consensus 28 ~lv~~li~~Gv~gl~~~GttGE~-------~~Ls~~Er~~v~~~~~~~~~g---r~pviaGvg~~~t~~ai~la~~A~~~ 97 (294)
T 3b4u_A 28 AHARRCLSNGCDSVTLFGTTGEG-------CSVGSRERQAILSSFIAAGIA---PSRIVTGVLVDSIEDAADQSAEALNA 97 (294)
T ss_dssp HHHHHHHHTTCSEEEESSTTTTG-------GGSCHHHHHHHHHHHHHTTCC---GGGEEEEECCSSHHHHHHHHHHHHHT
T ss_pred HHHHHHHHcCCCEEEECccccCh-------hhCCHHHHHHHHHHHHHHhCC---CCcEEEeCCCccHHHHHHHHHHHHhc
Confidence 45556667777776543212111 123666667777766653222 23466777 44667777777777777
Q ss_pred CCCEEee
Q 018731 276 DVDILTL 282 (351)
Q Consensus 276 g~d~i~i 282 (351)
|+|.+.+
T Consensus 98 Gadavlv 104 (294)
T 3b4u_A 98 GARNILL 104 (294)
T ss_dssp TCSEEEE
T ss_pred CCCEEEE
Confidence 7776555
No 85
>2v9d_A YAGE; dihydrodipicolinic acid synthase, N-acetyl neuraminate lyase, NAL, lyase, DHDPS, prophage; 2.15A {Escherichia coli} PDB: 2v8z_A 3nev_A* 3n2x_A*
Probab=85.72 E-value=6.9 Score=36.20 Aligned_cols=76 Identities=13% Similarity=0.191 Sum_probs=43.3
Q ss_pred HHHHHHHHcCCCeeecchhchHHHHhhhcCCCCCHHHHHHHHHHHHHhCCCCeEEEeeeeeC-CCCHHHHHHHHHHHHhC
Q 018731 197 RAVETLVHSGLDVFAHNIETVKRLQRIVRDPRAGYEQSLEVLKHAKLSKKGLITKSSIMLGL-GESDDDLKEAMADLRSI 275 (351)
Q Consensus 197 e~l~~L~~aG~~~i~~~ies~~~~~~~~r~~~~~~~~~l~~i~~~~~~~~Gi~v~~~~IvGl-gEt~e~~~~~l~~l~~l 275 (351)
..++.+.+.|++.+.+.=-|.+- ..-+.+++.+.++.+.+...| ..-+|+|. +.+.++..+..+.+.++
T Consensus 56 ~lv~~li~~Gv~Gl~v~GtTGE~-------~~Ls~eEr~~vi~~~ve~~~g---rvpViaGvg~~st~eai~la~~A~~~ 125 (343)
T 2v9d_A 56 ALIDDLIKAGVDGLFFLGSGGEF-------SQLGAEERKAIARFAIDHVDR---RVPVLIGTGGTNARETIELSQHAQQA 125 (343)
T ss_dssp HHHHHHHHTTCSCEEESSTTTTG-------GGSCHHHHHHHHHHHHHHHTT---SSCEEEECCSSCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHcCCCEEEeCccccCh-------hhCCHHHHHHHHHHHHHHhCC---CCcEEEecCCCCHHHHHHHHHHHHhc
Confidence 45555667777776543212111 123556666666666543233 23466777 45667777777777777
Q ss_pred CCCEEee
Q 018731 276 DVDILTL 282 (351)
Q Consensus 276 g~d~i~i 282 (351)
|+|.+.+
T Consensus 126 Gadavlv 132 (343)
T 2v9d_A 126 GADGIVV 132 (343)
T ss_dssp TCSEEEE
T ss_pred CCCEEEE
Confidence 7776555
No 86
>1thf_D HISF protein; thermophIle, TIM-barrel, histidine biosynthesis, lyase, phosphate-binding sites; 1.45A {Thermotoga maritima} SCOP: c.1.2.1 PDB: 2wjz_A 2a0n_A* 1gpw_A 1vh7_A 2rkx_A 3iio_A 3iip_A* 3iiv_A
Probab=85.64 E-value=4.4 Score=35.28 Aligned_cols=79 Identities=19% Similarity=0.251 Sum_probs=56.0
Q ss_pred chhHHHHHHHHHhCCCcEEEEeccCCCCCCCCcHHHHHHHHHHHHHhCCCcEEEEeecCCCCCHHHHHHHHHcCCCeeec
Q 018731 133 PMEPENTAKAIASWGVDYIVLTSVDRDDIPDGGSGHFARTVKAMKKQKPDIMVECLTSDFRGDLRAVETLVHSGLDVFAH 212 (351)
Q Consensus 133 ~eei~~~~~~~~~~G~~~I~ltgg~~~~l~~~~~~~~~~li~~ik~~~p~i~i~~~~~~~~~~~e~l~~L~~aG~~~i~~ 212 (351)
..++.+.++.+.+.|++.+.+...+.. .. +.....++++.+++.. ++.+.+ .++..+.+.++.+.++|+|.+.+
T Consensus 29 ~~d~~~~a~~~~~~Gad~i~v~d~~~~-~~--~~~~~~~~i~~i~~~~-~ipvi~--~ggI~~~~~~~~~~~~Gad~V~l 102 (253)
T 1thf_D 29 SGDPVELGKFYSEIGIDELVFLDITAS-VE--KRKTMLELVEKVAEQI-DIPFTV--GGGIHDFETASELILRGADKVSI 102 (253)
T ss_dssp TTCHHHHHHHHHHTTCCEEEEEESSCS-SS--HHHHHHHHHHHHHTTC-CSCEEE--ESSCCSHHHHHHHHHTTCSEEEE
T ss_pred ccCHHHHHHHHHHcCCCEEEEECCchh-hc--CCcccHHHHHHHHHhC-CCCEEE--eCCCCCHHHHHHHHHcCCCEEEE
Confidence 346677788888999999988755431 11 2345667888888753 455543 45666889999999999999988
Q ss_pred chhch
Q 018731 213 NIETV 217 (351)
Q Consensus 213 ~ies~ 217 (351)
+-+..
T Consensus 103 g~~~l 107 (253)
T 1thf_D 103 NTAAV 107 (253)
T ss_dssp SHHHH
T ss_pred ChHHH
Confidence 75443
No 87
>2ojp_A DHDPS, dihydrodipicolinate synthase; dimer, lysine biosynthe lyase; HET: KGC GOL; 1.70A {Escherichia coli} PDB: 1yxc_A 1dhp_A 1yxd_A* 2ats_A* 3du0_A* 3c0j_A* 3ubs_A* 4eou_A* 3i7q_A* 3i7r_A* 3i7s_A* 2pur_A* 1s5v_A 1s5w_A 1s5t_A 3den_A* 2a6l_A 2a6n_A 3g0s_A
Probab=85.51 E-value=6.1 Score=35.55 Aligned_cols=76 Identities=9% Similarity=0.073 Sum_probs=41.1
Q ss_pred HHHHHHHHcCCCeeecchhchHHHHhhhcCCCCCHHHHHHHHHHHHHhCCCCeEEEeeeeeC-CCCHHHHHHHHHHHHhC
Q 018731 197 RAVETLVHSGLDVFAHNIETVKRLQRIVRDPRAGYEQSLEVLKHAKLSKKGLITKSSIMLGL-GESDDDLKEAMADLRSI 275 (351)
Q Consensus 197 e~l~~L~~aG~~~i~~~ies~~~~~~~~r~~~~~~~~~l~~i~~~~~~~~Gi~v~~~~IvGl-gEt~e~~~~~l~~l~~l 275 (351)
..++.+.++|++.+.+.=-|.+- ..-+.+++.+.++.+.+...| ..-+|+|. +.+.++..+..+.+.+.
T Consensus 26 ~lv~~li~~Gv~gl~~~GttGE~-------~~Ls~~Er~~v~~~~~~~~~g---r~pviaGvg~~~t~~ai~la~~a~~~ 95 (292)
T 2ojp_A 26 KLIDYHVASGTSAIVSVGTTGES-------ATLNHDEHADVVMMTLDLADG---RIPVIAGTGANATAEAISLTQRFNDS 95 (292)
T ss_dssp HHHHHHHHHTCCEEEESSTTTTG-------GGSCHHHHHHHHHHHHHHHTT---SSCEEEECCCSSHHHHHHHHHHTTTS
T ss_pred HHHHHHHHcCCCEEEECccccch-------hhCCHHHHHHHHHHHHHHhCC---CCcEEEecCCccHHHHHHHHHHHHhc
Confidence 45555666677776542111111 022555666666655543223 13366677 44666666777777777
Q ss_pred CCCEEee
Q 018731 276 DVDILTL 282 (351)
Q Consensus 276 g~d~i~i 282 (351)
|+|.+.+
T Consensus 96 Gadavlv 102 (292)
T 2ojp_A 96 GIVGCLT 102 (292)
T ss_dssp SCSEEEE
T ss_pred CCCEEEE
Confidence 7776544
No 88
>3ble_A Citramalate synthase from leptospira interrogans; TIM barrel, licmsn, substrate specificity, acyltransferase, amino-acid biosynthesis; 2.00A {Leptospira interrogans} PDB: 3blf_A 3bli_A*
Probab=85.44 E-value=4.2 Score=37.51 Aligned_cols=122 Identities=11% Similarity=0.097 Sum_probs=74.1
Q ss_pred CchhHHHHHHHHHhCCCcEEEEeccCCCCCCCCcHHHHHHHHHHHHHhCCCcEEEEe-ecCCCCCHHHHHHHHHcCCCee
Q 018731 132 DPMEPENTAKAIASWGVDYIVLTSVDRDDIPDGGSGHFARTVKAMKKQKPDIMVECL-TSDFRGDLRAVETLVHSGLDVF 210 (351)
Q Consensus 132 ~~eei~~~~~~~~~~G~~~I~ltgg~~~~l~~~~~~~~~~li~~ik~~~p~i~i~~~-~~~~~~~~e~l~~L~~aG~~~i 210 (351)
+++.+.+.++.+.+.|+..|.|..-..-.. ...+.++++.+++..|++.+.+- +++.-+--.-.-.-.++|++.|
T Consensus 167 ~~~~~~~~~~~~~~~Ga~~i~l~DT~G~~~----P~~v~~lv~~l~~~~p~~~i~~H~Hnd~GlA~AN~laAv~aGa~~v 242 (337)
T 3ble_A 167 SPDYVKSLVEHLSKEHIERIFLPDTLGVLS----PEETFQGVDSLIQKYPDIHFEFHGHNDYDLSVANSLQAIRAGVKGL 242 (337)
T ss_dssp CHHHHHHHHHHHHTSCCSEEEEECTTCCCC----HHHHHHHHHHHHHHCTTSCEEEECBCTTSCHHHHHHHHHHTTCSEE
T ss_pred CHHHHHHHHHHHHHcCCCEEEEecCCCCcC----HHHHHHHHHHHHHhcCCCeEEEEecCCcchHHHHHHHHHHhCCCEE
Confidence 467888999999999999999943222112 47899999999998877655442 3332223334444567899999
Q ss_pred ecchhchHHHHhhhcCCCCCHHHHHHHHHHHHHhCCCCeEEEeeeeeCCCCHHHHHHHHHHHHh
Q 018731 211 AHNIETVKRLQRIVRDPRAGYEQSLEVLKHAKLSKKGLITKSSIMLGLGESDDDLKEAMADLRS 274 (351)
Q Consensus 211 ~~~ies~~~~~~~~r~~~~~~~~~l~~i~~~~~~~~Gi~v~~~~IvGlgEt~e~~~~~l~~l~~ 274 (351)
...+-.+-. .. .....++.+..++.. .|+. . |-+.+.+.++.+++.+
T Consensus 243 d~tv~GlG~---~a--GN~~~E~lv~~L~~~----~g~~------t--gidl~~L~~~~~~v~~ 289 (337)
T 3ble_A 243 HASINGLGE---RA--GNTPLEALVTTIHDK----SNSK------T--NINEIAITEASRLVEV 289 (337)
T ss_dssp EEBGGGCSS---TT--CBCBHHHHHHHHHHH----SSCC------C--CCCGGGHHHHHHHHHH
T ss_pred EEecccccc---cc--cchhHHHHHHHHHHh----cCCC------C--CcCHHHHHHHHHHHHH
Confidence 655443221 11 124677777776542 2443 2 2344455555555554
No 89
>2r8w_A AGR_C_1641P; APC7498, dihydrodipicolinate synthase, agrobacterium tumefac C58, structural genomics, PSI-2; HET: MSE; 1.80A {Agrobacterium tumefaciens str}
Probab=85.29 E-value=7.1 Score=35.90 Aligned_cols=76 Identities=17% Similarity=0.142 Sum_probs=46.7
Q ss_pred HHHHHHHHcCCCeeecchhchHHHHhhhcCCCCCHHHHHHHHHHHHHhCCCCeEEEeeeeeC-CCCHHHHHHHHHHHHhC
Q 018731 197 RAVETLVHSGLDVFAHNIETVKRLQRIVRDPRAGYEQSLEVLKHAKLSKKGLITKSSIMLGL-GESDDDLKEAMADLRSI 275 (351)
Q Consensus 197 e~l~~L~~aG~~~i~~~ies~~~~~~~~r~~~~~~~~~l~~i~~~~~~~~Gi~v~~~~IvGl-gEt~e~~~~~l~~l~~l 275 (351)
..++.+.+.|++.+.+.=-|.+- ..-+.+++.+.++.+.+...| ..-+|+|. +.+.++..+..+.+.++
T Consensus 59 ~lv~~li~~Gv~Gl~v~GtTGE~-------~~Ls~eEr~~vi~~~ve~~~g---rvpViaGvg~~st~eai~la~~A~~~ 128 (332)
T 2r8w_A 59 ALIARLDAAEVDSVGILGSTGIY-------MYLTREERRRAIEAAATILRG---RRTLMAGIGALRTDEAVALAKDAEAA 128 (332)
T ss_dssp HHHHHHHHHTCSEEEESSTTTTG-------GGSCHHHHHHHHHHHHHHHTT---SSEEEEEECCSSHHHHHHHHHHHHHH
T ss_pred HHHHHHHHcCCCEEEECccccCh-------hhCCHHHHHHHHHHHHHHhCC---CCcEEEecCCCCHHHHHHHHHHHHhc
Confidence 45666777788887643222211 123666666777666653333 23467777 45677777888888888
Q ss_pred CCCEEee
Q 018731 276 DVDILTL 282 (351)
Q Consensus 276 g~d~i~i 282 (351)
|+|.+.+
T Consensus 129 Gadavlv 135 (332)
T 2r8w_A 129 GADALLL 135 (332)
T ss_dssp TCSEEEE
T ss_pred CCCEEEE
Confidence 8887655
No 90
>2wkj_A N-acetylneuraminate lyase; directed evolution, sialic acid mimetics, aldolase, S base, carbohydrate metabolism, N-acetylneuraminic acid LYAS; HET: KPI PYR; 1.45A {Escherichia coli} PDB: 2wnq_A 2xfw_A* 2wpb_A* 2wnz_A* 2ygy_A* 2wo5_A* 2wnn_A* 3lbm_A 3lbc_A 3lcf_A 3lcl_A 3lcg_A 3lch_A 3lci_A 1hl2_A 1fdy_A 1fdz_A 1nal_1 3lcx_A 3lcw_A
Probab=85.09 E-value=8.8 Score=34.74 Aligned_cols=76 Identities=17% Similarity=0.160 Sum_probs=48.1
Q ss_pred HHHHHHHHcCCCeeecchhchHHHHhhhcCCCCCHHHHHHHHHHHHHhCCCCeEEEeeeeeC-CCCHHHHHHHHHHHHhC
Q 018731 197 RAVETLVHSGLDVFAHNIETVKRLQRIVRDPRAGYEQSLEVLKHAKLSKKGLITKSSIMLGL-GESDDDLKEAMADLRSI 275 (351)
Q Consensus 197 e~l~~L~~aG~~~i~~~ies~~~~~~~~r~~~~~~~~~l~~i~~~~~~~~Gi~v~~~~IvGl-gEt~e~~~~~l~~l~~l 275 (351)
..++.+.+.|++.+.+.=-|.+- ..-+.+++.+.++.+.+...| ..-+|+|. +.+.++..+..+.+.+.
T Consensus 36 ~lv~~li~~Gv~Gl~v~GtTGE~-------~~Ls~eEr~~v~~~~~~~~~g---rvpViaGvg~~~t~~ai~la~~A~~~ 105 (303)
T 2wkj_A 36 RLVQFNIQQGIDGLYVGGSTGEA-------FVQSLSEREQVLEIVAEEAKG---KIKLIAHVGCVSTAESQQLAASAKRY 105 (303)
T ss_dssp HHHHHHHHTTCSEEEESSTTTTG-------GGSCHHHHHHHHHHHHHHHTT---TSEEEEECCCSSHHHHHHHHHHHHHH
T ss_pred HHHHHHHHcCCCEEEECeeccCh-------hhCCHHHHHHHHHHHHHHhCC---CCcEEEecCCCCHHHHHHHHHHHHhC
Confidence 55666777888887653222211 123666777777766653233 23467788 45777778888888888
Q ss_pred CCCEEee
Q 018731 276 DVDILTL 282 (351)
Q Consensus 276 g~d~i~i 282 (351)
|+|.+.+
T Consensus 106 Gadavlv 112 (303)
T 2wkj_A 106 GFDAVSA 112 (303)
T ss_dssp TCSEEEE
T ss_pred CCCEEEe
Confidence 8887665
No 91
>1wbh_A KHG/KDPG aldolase; lyase; 1.55A {Escherichia coli} SCOP: c.1.10.1 PDB: 2c0a_A 1wau_A 1eua_A 1eun_A 1fq0_A* 1fwr_A*
Probab=85.07 E-value=17 Score=31.00 Aligned_cols=112 Identities=15% Similarity=0.117 Sum_probs=75.3
Q ss_pred CCchhHHHHHHHHHhCCCcEEEEeccCCCCCCCCcHHHHHHHHHHHHHhCCCcEEEEeecCCCCCHHHHHHHHHcCCCee
Q 018731 131 PDPMEPENTAKAIASWGVDYIVLTSVDRDDIPDGGSGHFARTVKAMKKQKPDIMVECLTSDFRGDLRAVETLVHSGLDVF 210 (351)
Q Consensus 131 ~~~eei~~~~~~~~~~G~~~I~ltgg~~~~l~~~~~~~~~~li~~ik~~~p~i~i~~~~~~~~~~~e~l~~L~~aG~~~i 210 (351)
.++++..+.++.+.+.|++-|-++--+ + .-.+.++.+++.+|++.+..-+ .++.+.++...++|.|.+
T Consensus 25 ~~~~~~~~~~~al~~gGv~~iel~~k~----~-----~~~~~i~~l~~~~~~~~vgagt---vi~~d~~~~A~~aGAd~v 92 (214)
T 1wbh_A 25 KKLEHAVPMAKALVAGGVRVLNVTLRT----E-----CAVDAIRAIAKEVPEAIVGAGT---VLNPQQLAEVTEAGAQFA 92 (214)
T ss_dssp SSGGGHHHHHHHHHHTTCCEEEEESCS----T-----THHHHHHHHHHHCTTSEEEEES---CCSHHHHHHHHHHTCSCE
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEeCCC----h-----hHHHHHHHHHHHCcCCEEeeCE---EEEHHHHHHHHHcCCCEE
Confidence 356788889999999999988886321 1 2356788788878877665532 358899999999999988
Q ss_pred ecchhchHHHHhhhcCCCCCHHHHHHHHHHHHHhCCCCeEEEeeeeeCCCCHHHHHHHHHHHHhCCCCEEeee
Q 018731 211 AHNIETVKRLQRIVRDPRAGYEQSLEVLKHAKLSKKGLITKSSIMLGLGESDDDLKEAMADLRSIDVDILTLG 283 (351)
Q Consensus 211 ~~~ies~~~~~~~~r~~~~~~~~~l~~i~~~~~~~~Gi~v~~~~IvGlgEt~e~~~~~l~~l~~lg~d~i~i~ 283 (351)
..+ ..+ .+.++.+++ .|+. ++.| -.|.+++.+. .+.|+|.+.+|
T Consensus 93 ~~p--------------~~d----~~v~~~~~~--~g~~----~i~G-~~t~~e~~~A----~~~Gad~v~~F 136 (214)
T 1wbh_A 93 ISP--------------GLT----EPLLKAATE--GTIP----LIPG-ISTVSELMLG----MDYGLKEFKFF 136 (214)
T ss_dssp EES--------------SCC----HHHHHHHHH--SSSC----EEEE-ESSHHHHHHH----HHTTCCEEEET
T ss_pred EcC--------------CCC----HHHHHHHHH--hCCC----EEEe-cCCHHHHHHH----HHCCCCEEEEe
Confidence 533 111 234445555 5643 4556 3566665443 46888888874
No 92
>3tdn_A FLR symmetric alpha-beta TIM barrel; symmetric superfold, de novo protein; 1.40A {Synthetic construct} PDB: 3og3_A 3tdm_A
Probab=84.79 E-value=2.1 Score=37.38 Aligned_cols=78 Identities=19% Similarity=0.231 Sum_probs=54.7
Q ss_pred hhHHHHHHHHHhCCCcEEEEeccCCCCCCCCcHHHHHHHHHHHHHhCCCcEEEEeecCCCCCHHHHHHHHHcCCCeeecc
Q 018731 134 MEPENTAKAIASWGVDYIVLTSVDRDDIPDGGSGHFARTVKAMKKQKPDIMVECLTSDFRGDLRAVETLVHSGLDVFAHN 213 (351)
Q Consensus 134 eei~~~~~~~~~~G~~~I~ltgg~~~~l~~~~~~~~~~li~~ik~~~p~i~i~~~~~~~~~~~e~l~~L~~aG~~~i~~~ 213 (351)
.++.+.++.+.+.|++.+.++..+...... ....++++.+++.. ++.+-+ .++..+.+.++.+.++|+|.+.++
T Consensus 35 ~~~~~~a~~~~~~G~~~i~v~d~~~~~~~~---~~~~~~i~~i~~~~-~ipvi~--~Ggi~~~~~~~~~l~~Gad~V~ig 108 (247)
T 3tdn_A 35 ILLRDWVVEVEKRGAGEILLTSIDRDGTKS---GYDTEMIRFVRPLT-TLPIIA--SGGAGKMEHFLEAFLRGADKVSIN 108 (247)
T ss_dssp EEHHHHHHHHHHTTCSEEEEEETTTTTCSS---CCCHHHHHHHGGGC-CSCEEE--ESCCCSHHHHHHHHHTTCSEECCS
T ss_pred CCHHHHHHHHHHcCCCEEEEEecCcccCCC---cccHHHHHHHHHhC-CCCEEE--eCCCCCHHHHHHHHHcCCCeeehh
Confidence 456778888889999999998765321111 12346777787764 455543 556668899999999999999887
Q ss_pred hhch
Q 018731 214 IETV 217 (351)
Q Consensus 214 ies~ 217 (351)
-..+
T Consensus 109 ~~~l 112 (247)
T 3tdn_A 109 TAAV 112 (247)
T ss_dssp HHHH
T ss_pred hHHh
Confidence 5443
No 93
>3noy_A 4-hydroxy-3-methylbut-2-EN-1-YL diphosphate synth; iron-sulfur protein, non-mevalonate pathway, terpene biosynt isoprenoid biosynthesis; 2.70A {Aquifex aeolicus}
Probab=84.68 E-value=25 Score=32.56 Aligned_cols=126 Identities=13% Similarity=0.101 Sum_probs=82.2
Q ss_pred CCchhHHHHHHHHHhCCCcEEEEeccCCCCCCCCcHHHHHHHHHHHHHhCCCcEEEEeecCCCCCHHHHHHHHHcCCCee
Q 018731 131 PDPMEPENTAKAIASWGVDYIVLTSVDRDDIPDGGSGHFARTVKAMKKQKPDIMVECLTSDFRGDLRAVETLVHSGLDVF 210 (351)
Q Consensus 131 ~~~eei~~~~~~~~~~G~~~I~ltgg~~~~l~~~~~~~~~~li~~ik~~~p~i~i~~~~~~~~~~~e~l~~L~~aG~~~i 210 (351)
.+.+...+.+.++.+.|.+-|-++-. + +.-.+.+..|++.. ++.+- .|+..+...+..-.++|++.+
T Consensus 43 ~D~~atv~Qi~~l~~aG~diVRvavp------~---~~~a~al~~I~~~~-~vPlv---aDiHf~~~lal~a~e~G~dkl 109 (366)
T 3noy_A 43 HDVEATLNQIKRLYEAGCEIVRVAVP------H---KEDVEALEEIVKKS-PMPVI---ADIHFAPSYAFLSMEKGVHGI 109 (366)
T ss_dssp TCHHHHHHHHHHHHHTTCCEEEEECC------S---HHHHHHHHHHHHHC-SSCEE---EECCSCHHHHHHHHHTTCSEE
T ss_pred cCHHHHHHHHHHHHHcCCCEEEeCCC------C---hHHHHHHHHHHhcC-CCCEE---EeCCCCHHHHHHHHHhCCCeE
Confidence 45667788888899999999888532 1 34467888888874 34443 344458888888899999998
Q ss_pred ecchhchHHHHhhhcCCCCCHHHHHHHHHHHHHhCCCCeEEEeeeee---------C-CCCHHHH----HHHHHHHHhCC
Q 018731 211 AHNIETVKRLQRIVRDPRAGYEQSLEVLKHAKLSKKGLITKSSIMLG---------L-GESDDDL----KEAMADLRSID 276 (351)
Q Consensus 211 ~~~ies~~~~~~~~r~~~~~~~~~l~~i~~~~~~~~Gi~v~~~~IvG---------l-gEt~e~~----~~~l~~l~~lg 276 (351)
.+|.-.. .+-+++.+.++.+++ .|+.+..++=-| + +.|.+.+ .+.++.+.+++
T Consensus 110 RINPGNi-----------g~~~~~~~vv~~ak~--~~~piRIGvN~GSL~~~ll~~yg~~~~eamVeSAl~~~~~~e~~g 176 (366)
T 3noy_A 110 RINPGNI-----------GKEEIVREIVEEAKR--RGVAVRIGVNSGSLEKDLLEKYGYPSAEALAESALRWSEKFEKWG 176 (366)
T ss_dssp EECHHHH-----------SCHHHHHHHHHHHHH--HTCEEEEEEEGGGCCHHHHHHHSSCCHHHHHHHHHHHHHHHHHTT
T ss_pred EECCccc-----------CchhHHHHHHHHHHH--cCCCEEEecCCcCCCHHHHHhcCCCCHHHHHHHHHHHHHHHHhCC
Confidence 7763221 123445567777887 777765553333 3 2565444 44566777788
Q ss_pred CCEEee
Q 018731 277 VDILTL 282 (351)
Q Consensus 277 ~d~i~i 282 (351)
++.+-+
T Consensus 177 f~~ivi 182 (366)
T 3noy_A 177 FTNYKV 182 (366)
T ss_dssp CCCEEE
T ss_pred CCeEEE
Confidence 865444
No 94
>1vc4_A Indole-3-glycerol phosphate synthase; lyase, tryptophan biosynthesis, riken structural genomics/PR initiative, RSGI, structural genomics; 1.80A {Thermus thermophilus} SCOP: c.1.2.4
Probab=84.59 E-value=11 Score=33.28 Aligned_cols=119 Identities=18% Similarity=0.168 Sum_probs=74.7
Q ss_pred hhHHHHHHHHHhCCCcEEEEeccCCCCCCCCcHHHHHHHHHHHHHhCCCcEEEEeecCCCCCHHHHHHHHHcCCCeeecc
Q 018731 134 MEPENTAKAIASWGVDYIVLTSVDRDDIPDGGSGHFARTVKAMKKQKPDIMVECLTSDFRGDLRAVETLVHSGLDVFAHN 213 (351)
Q Consensus 134 eei~~~~~~~~~~G~~~I~ltgg~~~~l~~~~~~~~~~li~~ik~~~p~i~i~~~~~~~~~~~e~l~~L~~aG~~~i~~~ 213 (351)
..+.+.++.+.+.|+..|.+...+ .+..+..+++ +.+++.. ++.| +..+|..++..++..+++|.|.|.++
T Consensus 65 ~~p~~~A~~~~~~GA~~isvlt~~--~~f~G~~~~l----~~i~~~v-~lPv--l~kdfI~d~~qi~~a~~~GAD~VlL~ 135 (254)
T 1vc4_A 65 VDPVEAALAYARGGARAVSVLTEP--HRFGGSLLDL----KRVREAV-DLPL--LRKDFVVDPFMLEEARAFGASAALLI 135 (254)
T ss_dssp CCHHHHHHHHHHTTCSEEEEECCC--SSSCCCHHHH----HHHHHHC-CSCE--EEESCCCSHHHHHHHHHTTCSEEEEE
T ss_pred CCHHHHHHHHHHcCCCEEEEecch--hhhccCHHHH----HHHHHhc-CCCE--EECCcCCCHHHHHHHHHcCCCEEEEC
Confidence 567788888999999999774332 2333333333 3444432 4444 34678889888999999999999887
Q ss_pred hhchHHHHhhhcCCCCCHHHHHHHHHHHHHhCCCCeEEEeeeeeCCCCHHHHHHHHHHHHhCCCCEEeeecc
Q 018731 214 IETVKRLQRIVRDPRAGYEQSLEVLKHAKLSKKGLITKSSIMLGLGESDDDLKEAMADLRSIDVDILTLGQY 285 (351)
Q Consensus 214 ies~~~~~~~~r~~~~~~~~~l~~i~~~~~~~~Gi~v~~~~IvGlgEt~e~~~~~l~~l~~lg~d~i~i~~~ 285 (351)
...++ ++..+.++.+++ .|+.+. +- -.++++.. .+.+++.+.+.+++.
T Consensus 136 ~~~l~-------------~~l~~l~~~a~~--lGl~~l----ve-v~~~~E~~----~a~~~gad~IGvn~~ 183 (254)
T 1vc4_A 136 VALLG-------------ELTGAYLEEARR--LGLEAL----VE-VHTERELE----IALEAGAEVLGINNR 183 (254)
T ss_dssp HHHHG-------------GGHHHHHHHHHH--HTCEEE----EE-ECSHHHHH----HHHHHTCSEEEEESB
T ss_pred ccchH-------------HHHHHHHHHHHH--CCCeEE----EE-ECCHHHHH----HHHHcCCCEEEEccc
Confidence 54322 223345556666 676542 22 24566654 455678899998643
No 95
>1qpo_A Quinolinate acid phosphoribosyl transferase; type II prtase, de novo NAD biosynthesis, PRPP, phosphoribos transferase; 2.40A {Mycobacterium tuberculosis H37RV} SCOP: c.1.17.1 d.41.2.1 PDB: 1qpn_A 1qpq_A* 1qpr_A*
Probab=84.56 E-value=2.6 Score=38.01 Aligned_cols=67 Identities=19% Similarity=0.240 Sum_probs=49.8
Q ss_pred HHHHHHHHhCCCcEEEEeccCCCCCCCCcHHHHHHHHHHHHHhCCCcEEEEeecCCCCCHHHHHHHHHcCCCeeecch
Q 018731 137 ENTAKAIASWGVDYIVLTSVDRDDIPDGGSGHFARTVKAMKKQKPDIMVECLTSDFRGDLRAVETLVHSGLDVFAHNI 214 (351)
Q Consensus 137 ~~~~~~~~~~G~~~I~ltgg~~~~l~~~~~~~~~~li~~ik~~~p~i~i~~~~~~~~~~~e~l~~L~~aG~~~i~~~i 214 (351)
.++++++.+.|++.|.|- .++ .+.+.+.++.++..++.+.+++ .++ ++++.+..+++.|+|.|++|-
T Consensus 204 ~eea~eal~aGaD~I~LD-----n~~---~~~~~~~v~~l~~~~~~v~iea--SGG-It~~~i~~~a~tGVD~isvG~ 270 (284)
T 1qpo_A 204 LEQLDAVLPEKPELILLD-----NFA---VWQTQTAVQRRDSRAPTVMLES--SGG-LSLQTAATYAETGVDYLAVGA 270 (284)
T ss_dssp HHHHHHHGGGCCSEEEEE-----TCC---HHHHHHHHHHHHHHCTTCEEEE--ESS-CCTTTHHHHHHTTCSEEECGG
T ss_pred HHHHHHHHHcCCCEEEEC-----CCC---HHHHHHHHHHhhccCCCeEEEE--ECC-CCHHHHHHHHhcCCCEEEECH
Confidence 356666667899877772 233 4788888888887666677776 344 388999999999999998763
No 96
>3eb2_A Putative dihydrodipicolinate synthetase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI2., structural genomics; HET: PGE; 2.04A {Rhodopseudomonas palustris} SCOP: c.1.10.0
Probab=84.43 E-value=8.7 Score=34.72 Aligned_cols=76 Identities=14% Similarity=0.142 Sum_probs=45.2
Q ss_pred HHHHHHHHcCCCeeecchhchHHHHhhhcCCCCCHHHHHHHHHHHHHhCCCCeEEEeeeeeC-CCCHHHHHHHHHHHHhC
Q 018731 197 RAVETLVHSGLDVFAHNIETVKRLQRIVRDPRAGYEQSLEVLKHAKLSKKGLITKSSIMLGL-GESDDDLKEAMADLRSI 275 (351)
Q Consensus 197 e~l~~L~~aG~~~i~~~ies~~~~~~~~r~~~~~~~~~l~~i~~~~~~~~Gi~v~~~~IvGl-gEt~e~~~~~l~~l~~l 275 (351)
..++.+.+.|++.+.+.=-|.+- ..-+.+++.+.++.+.+...| ..-+|+|. +.+.++..+..+.+.++
T Consensus 29 ~lv~~li~~Gv~gl~v~GttGE~-------~~Ls~~Er~~v~~~~~~~~~g---rvpviaGvg~~~t~~ai~la~~a~~~ 98 (300)
T 3eb2_A 29 RLCDDLIQAGVHGLTPLGSTGEF-------AYLGTAQREAVVRATIEAAQR---RVPVVAGVASTSVADAVAQAKLYEKL 98 (300)
T ss_dssp HHHHHHHHTTCSCBBTTSGGGTG-------GGCCHHHHHHHHHHHHHHHTT---SSCBEEEEEESSHHHHHHHHHHHHHH
T ss_pred HHHHHHHHcCCCEEEECccccCc-------cccCHHHHHHHHHHHHHHhCC---CCcEEEeCCCCCHHHHHHHHHHHHHc
Confidence 45666677788877543222211 123566666666666553222 23356677 46677777777888888
Q ss_pred CCCEEee
Q 018731 276 DVDILTL 282 (351)
Q Consensus 276 g~d~i~i 282 (351)
|+|.+.+
T Consensus 99 Gadavlv 105 (300)
T 3eb2_A 99 GADGILA 105 (300)
T ss_dssp TCSEEEE
T ss_pred CCCEEEE
Confidence 8876655
No 97
>2cw6_A Hydroxymethylglutaryl-COA lyase, mitochondrial; HMG-COA lyase, ketogenic enzyme; HET: 3HG; 2.10A {Homo sapiens} PDB: 3mp3_A* 3mp4_A 3mp5_A*
Probab=84.05 E-value=4.8 Score=36.35 Aligned_cols=125 Identities=18% Similarity=0.167 Sum_probs=74.8
Q ss_pred CCchhHHHHHHHHHhCCCcEEEEeccCCCCCCCCcHHHHHHHHHHHHHhCCCc--EEEEeecCCCCCHHHHHHHHHcCCC
Q 018731 131 PDPMEPENTAKAIASWGVDYIVLTSVDRDDIPDGGSGHFARTVKAMKKQKPDI--MVECLTSDFRGDLRAVETLVHSGLD 208 (351)
Q Consensus 131 ~~~eei~~~~~~~~~~G~~~I~ltgg~~~~l~~~~~~~~~~li~~ik~~~p~i--~i~~~~~~~~~~~e~l~~L~~aG~~ 208 (351)
.+++.+.+.++.+.+.|++.|.|..-..- +. ...+.++++.+++..|++ .+++ +++.-+--.-.-.-.++|++
T Consensus 153 ~~~~~~~~~~~~~~~~Ga~~i~l~DT~G~-~~---P~~~~~lv~~l~~~~~~~~i~~H~-Hn~~Gla~An~laA~~aGa~ 227 (298)
T 2cw6_A 153 ISPAKVAEVTKKFYSMGCYEISLGDTIGV-GT---PGIMKDMLSAVMQEVPLAALAVHC-HDTYGQALANTLMALQMGVS 227 (298)
T ss_dssp CCHHHHHHHHHHHHHTTCSEEEEEETTSC-CC---HHHHHHHHHHHHHHSCGGGEEEEE-BCTTSCHHHHHHHHHHTTCC
T ss_pred CCHHHHHHHHHHHHHcCCCEEEecCCCCC-cC---HHHHHHHHHHHHHhCCCCeEEEEE-CCCCchHHHHHHHHHHhCCC
Confidence 45788899999999999999988533221 22 478999999999988764 4444 33332222333444678999
Q ss_pred eeecchhchHH--HHhhhcCCCCCHHHHHHHHHHHHHhCCCCeEEEeeeeeCCCCHHHHHHHHHHHHh
Q 018731 209 VFAHNIETVKR--LQRIVRDPRAGYEQSLEVLKHAKLSKKGLITKSSIMLGLGESDDDLKEAMADLRS 274 (351)
Q Consensus 209 ~i~~~ies~~~--~~~~~r~~~~~~~~~l~~i~~~~~~~~Gi~v~~~~IvGlgEt~e~~~~~l~~l~~ 274 (351)
.|...+-.+-+ +-. .+-.....++.+..++. .|+.+ |-+.+.+.++.+++.+
T Consensus 228 ~vd~tv~GlG~cp~a~-g~aGN~~~E~lv~~l~~-----~g~~~--------~idl~~l~~~~~~~~~ 281 (298)
T 2cw6_A 228 VVDSSVAGLGGCPYAQ-GASGNLATEDLVYMLEG-----LGIHT--------GVNLQKLLEAGNFICQ 281 (298)
T ss_dssp EEEEBTTSCCCCTTSC-SSCCBCBHHHHHHHHHH-----HTCBC--------CCCHHHHHHHHHHHHH
T ss_pred EEEeecccccCCCCCC-CCcCChhHHHHHHHHHh-----cCCCC--------CcCHHHHHHHHHHHHH
Confidence 98655433211 111 01012356666666643 34431 3456667776666654
No 98
>1h5y_A HISF; histidine biosynthesis, TIM-barrel; 2.0A {Pyrobaculum aerophilum} SCOP: c.1.2.1
Probab=83.98 E-value=4.2 Score=35.03 Aligned_cols=77 Identities=22% Similarity=0.226 Sum_probs=54.9
Q ss_pred chhHHHHHHHHHhCCCcEEEEeccCCCCCCCCcHHHHHHHHHHHHHhCCCcEEEEeecCCCCCHHHHHHHHHcCCCeeec
Q 018731 133 PMEPENTAKAIASWGVDYIVLTSVDRDDIPDGGSGHFARTVKAMKKQKPDIMVECLTSDFRGDLRAVETLVHSGLDVFAH 212 (351)
Q Consensus 133 ~eei~~~~~~~~~~G~~~I~ltgg~~~~l~~~~~~~~~~li~~ik~~~p~i~i~~~~~~~~~~~e~l~~L~~aG~~~i~~ 212 (351)
.++..+.++.+.+.|++.+.++..+.. .. +.....++++.+++.. ++.+-+ .++..+.+.++.+.++|++.|.+
T Consensus 32 ~~~~~~~a~~~~~~G~d~i~v~~~~~~-~~--~~~~~~~~i~~i~~~~-~ipvi~--~g~i~~~~~~~~~~~~Gad~V~i 105 (253)
T 1h5y_A 32 VGDPVEMAVRYEEEGADEIAILDITAA-PE--GRATFIDSVKRVAEAV-SIPVLV--GGGVRSLEDATTLFRAGADKVSV 105 (253)
T ss_dssp EECHHHHHHHHHHTTCSCEEEEECCCC-TT--THHHHHHHHHHHHHHC-SSCEEE--ESSCCSHHHHHHHHHHTCSEEEE
T ss_pred cccHHHHHHHHHHcCCCEEEEEeCCcc-cc--CCcccHHHHHHHHHhc-CCCEEE--ECCCCCHHHHHHHHHcCCCEEEE
Confidence 456788888889999999988754321 11 2345667888888764 455443 44556888899999999999988
Q ss_pred chh
Q 018731 213 NIE 215 (351)
Q Consensus 213 ~ie 215 (351)
+.+
T Consensus 106 ~~~ 108 (253)
T 1h5y_A 106 NTA 108 (253)
T ss_dssp SHH
T ss_pred ChH
Confidence 744
No 99
>1h1y_A D-ribulose-5-phosphate 3-epimerase; oxidative pentose phosphate pathway, isomerase; 1.87A {Oryza sativa} SCOP: c.1.2.2 PDB: 1h1z_A
Probab=83.87 E-value=11 Score=32.30 Aligned_cols=130 Identities=18% Similarity=0.279 Sum_probs=72.5
Q ss_pred CchhHHHHHHHHHhCCCcEEEEeccCCCCCCCCcHHHHHHHHHHHHHhCC-CcEEEEeecCCCCCHHHHHHHHHcCCCee
Q 018731 132 DPMEPENTAKAIASWGVDYIVLTSVDRDDIPDGGSGHFARTVKAMKKQKP-DIMVECLTSDFRGDLRAVETLVHSGLDVF 210 (351)
Q Consensus 132 ~~eei~~~~~~~~~~G~~~I~ltgg~~~~l~~~~~~~~~~li~~ik~~~p-~i~i~~~~~~~~~~~e~l~~L~~aG~~~i 210 (351)
+.....+.++.+.+.|++.+.|---+.+..++ ...-.++++.+++... .+.+.+.+++ .++.++.+.++|.|.+
T Consensus 17 d~~~l~~~i~~~~~~Gad~i~l~i~Dg~fv~~--~~~~~~~~~~lr~~~~~~~~v~lmv~d---~~~~i~~~~~agad~v 91 (228)
T 1h1y_A 17 DFANLAAEADRMVRLGADWLHMDIMDGHFVPN--LTIGAPVIQSLRKHTKAYLDCHLMVTN---PSDYVEPLAKAGASGF 91 (228)
T ss_dssp CGGGHHHHHHHHHHTTCSEEEEEEEBSSSSSC--BCBCHHHHHHHHTTCCSEEEEEEESSC---GGGGHHHHHHHTCSEE
T ss_pred CHHHHHHHHHHHHHcCCCEEEEEEecCCcCcc--hhhCHHHHHHHHhhcCCcEEEEEEecC---HHHHHHHHHHcCCCEE
Confidence 45567778888888999976553111111121 0112367777887642 2344455543 3457899999999999
Q ss_pred ecchhchHHHHhhhcCCCCCHHHHHHHHHHHHHhCCCCeEEEeeeeeCCCCHHHHHHHHHHHHhC--CCCEEeeecccCC
Q 018731 211 AHNIETVKRLQRIVRDPRAGYEQSLEVLKHAKLSKKGLITKSSIMLGLGESDDDLKEAMADLRSI--DVDILTLGQYLQP 288 (351)
Q Consensus 211 ~~~ies~~~~~~~~r~~~~~~~~~l~~i~~~~~~~~Gi~v~~~~IvGlgEt~e~~~~~l~~l~~l--g~d~i~i~~~l~P 288 (351)
.+..+..+ ... .+.++.+++ .|+.+. +.+. ..|..+. ++.+.+. ++|.+.++.. .|
T Consensus 92 ~vH~~~~~----------~~~---~~~~~~i~~--~g~~ig--v~~~-p~t~~e~---~~~~~~~~~~~d~vl~~sv-~p 149 (228)
T 1h1y_A 92 TFHIEVSR----------DNW---QELIQSIKA--KGMRPG--VSLR-PGTPVEE---VFPLVEAENPVELVLVMTV-EP 149 (228)
T ss_dssp EEEGGGCT----------TTH---HHHHHHHHH--TTCEEE--EEEC-TTSCGGG---GHHHHHSSSCCSEEEEESS-CT
T ss_pred EECCCCcc----------cHH---HHHHHHHHH--cCCCEE--EEEe-CCCCHHH---HHHHHhcCCCCCEEEEEee-cC
Confidence 77654321 111 244556666 787644 2232 2333322 2333455 7898888633 46
No 100
>3ewb_X 2-isopropylmalate synthase; LEUA, structural genomics, unknown function, amino-acid biosynthesis; 2.10A {Listeria monocytogenes str}
Probab=83.86 E-value=6 Score=35.70 Aligned_cols=126 Identities=10% Similarity=0.049 Sum_probs=75.0
Q ss_pred CCchhHHHHHHHHHhCCCcEEEEeccCCCCCCCCcHHHHHHHHHHHHHhCCC---cEEEEe-ecCCCCCHHHHHHHHHcC
Q 018731 131 PDPMEPENTAKAIASWGVDYIVLTSVDRDDIPDGGSGHFARTVKAMKKQKPD---IMVECL-TSDFRGDLRAVETLVHSG 206 (351)
Q Consensus 131 ~~~eei~~~~~~~~~~G~~~I~ltgg~~~~l~~~~~~~~~~li~~ik~~~p~---i~i~~~-~~~~~~~~e~l~~L~~aG 206 (351)
.+++.+.+.++.+.+.|+..|.|..-..-.. ...+.++++.+++..|+ +.+.+- .++.-+--.-.-.-.++|
T Consensus 147 ~~~~~~~~~~~~~~~~G~~~i~l~DT~G~~~----P~~v~~lv~~l~~~~~~~~~~~l~~H~Hnd~Gla~AN~laA~~aG 222 (293)
T 3ewb_X 147 SDRAFLIEAVQTAIDAGATVINIPDTVGYTN----PTEFGQLFQDLRREIKQFDDIIFASHCHDDLGMATANALAAIENG 222 (293)
T ss_dssp SCHHHHHHHHHHHHHTTCCEEEEECSSSCCC----HHHHHHHHHHHHHHCTTGGGSEEEEECBCTTSCHHHHHHHHHHTT
T ss_pred CCHHHHHHHHHHHHHcCCCEEEecCCCCCCC----HHHHHHHHHHHHHhcCCccCceEEEEeCCCcChHHHHHHHHHHhC
Confidence 4567788999999999999999954332212 37899999999998875 344432 333222333444456799
Q ss_pred CCeeecchhchHHHHhhhcCCCCCHHHHHHHHHHHHHhCCCCeEEEeeeeeCCCCHHHHHHHHHHHHh
Q 018731 207 LDVFAHNIETVKRLQRIVRDPRAGYEQSLEVLKHAKLSKKGLITKSSIMLGLGESDDDLKEAMADLRS 274 (351)
Q Consensus 207 ~~~i~~~ies~~~~~~~~r~~~~~~~~~l~~i~~~~~~~~Gi~v~~~~IvGlgEt~e~~~~~l~~l~~ 274 (351)
++.|..++-.+-. .. .....++.+-.++.-.. ..|+.+ |-..+.+.++.+++.+
T Consensus 223 a~~vd~sv~GlGe---ra--GN~~~E~vv~~L~~~~~-~~g~~t--------gidl~~L~~~s~~v~~ 276 (293)
T 3ewb_X 223 ARRVEGTINGIGE---RA--GNTALEEVAVALHIRKD-FYQAET--------NIVLNQFKNSSDLISR 276 (293)
T ss_dssp CCEEEEBGGGCCT---TT--CBCBHHHHHHHHHHTHH-HHCEEE--------CCCGGGHHHHHHHHHH
T ss_pred CCEEEeecccccc---cc--ccHhHHHHHHHHHhhhh-hcCCCC--------CCCHHHHHHHHHHHHH
Confidence 9998655444221 11 12467777777654211 024432 2344556666666654
No 101
>2y7e_A 3-keto-5-aminohexanoate cleavage enzyme; lyase, aldolase; 1.28A {Candidatus cloacamonas acidaminovoransorganism_taxid} PDB: 2y7d_A 2y7f_A* 2y7g_A
Probab=83.85 E-value=9.1 Score=34.36 Aligned_cols=84 Identities=23% Similarity=0.281 Sum_probs=55.1
Q ss_pred CCCCchhHHHHHHHHHhCCCcEEEE--eccCCCCCCCCcHHHHHHHHHHHHHhCCCcEEEEeecCCCC-C-HHHHHHHHH
Q 018731 129 APPDPMEPENTAKAIASWGVDYIVL--TSVDRDDIPDGGSGHFARTVKAMKKQKPDIMVECLTSDFRG-D-LRAVETLVH 204 (351)
Q Consensus 129 ~~~~~eei~~~~~~~~~~G~~~I~l--tgg~~~~l~~~~~~~~~~li~~ik~~~p~i~i~~~~~~~~~-~-~e~l~~L~~ 204 (351)
.+.+++|+.+.+.+..+.|..-+.+ -..+. -+..+.+.|.++++.|++..|++-|...|..... + ++.+..+ +
T Consensus 29 lPvTpeEia~~A~~a~~AGAaivHlHvRd~~G--~ps~d~~~~~e~~~~IR~~~pd~ii~~TTg~~~~~~~eeR~~~~-~ 105 (282)
T 2y7e_A 29 LPITPEEQAKEAKACFEAGARVIHLHIREDDG--RPSQRLDRFQEAISAIREVVPEIIIQISTGGAVGESFDKRLAPL-A 105 (282)
T ss_dssp CCCSHHHHHHHHHHHHHHTEEEEEECEECTTS--CEECCHHHHHHHHHHHHHHCTTSEEEECSSCSTTCCHHHHHGGG-G
T ss_pred CCCCHHHHHHHHHHHHHcCCcEEEEeecCCCC--CcCCCHHHHHHHHHHHHHHCCCeEEEeCCCCCCCCCHHHHHHHh-h
Confidence 4467899999999989999886655 22111 1112368999999999998889877764432211 3 3444444 6
Q ss_pred cCCCeeecchh
Q 018731 205 SGLDVFAHNIE 215 (351)
Q Consensus 205 aG~~~i~~~ie 215 (351)
...+..++++-
T Consensus 106 ~~Pe~asl~~g 116 (282)
T 2y7e_A 106 LKPEMATLNAG 116 (282)
T ss_dssp GCCSEEEEECC
T ss_pred cCCCEEEeccc
Confidence 67787765443
No 102
>2vef_A Dihydropteroate synthase; antibiotic resistance, transferase, folate biosynthesis; 1.8A {Streptococcus pneumoniae} PDB: 2veg_A*
Probab=83.31 E-value=13 Score=33.94 Aligned_cols=76 Identities=14% Similarity=0.206 Sum_probs=50.0
Q ss_pred CCchhHHHHHHHHHhCCCcEEEEeccC-CCCCC----CCcHHHHHHHHHHHHHhCCCcEEEEeecCCCCCHHHHHHHHHc
Q 018731 131 PDPMEPENTAKAIASWGVDYIVLTSVD-RDDIP----DGGSGHFARTVKAMKKQKPDIMVECLTSDFRGDLRAVETLVHS 205 (351)
Q Consensus 131 ~~~eei~~~~~~~~~~G~~~I~ltgg~-~~~l~----~~~~~~~~~li~~ik~~~p~i~i~~~~~~~~~~~e~l~~L~~a 205 (351)
.+++.+++.++++.+.|..-|-+.|.. .+... +.+.+++..+++.|++.. ++.|.+=| ...+.++.-.++
T Consensus 30 ~~~~~a~~~a~~~v~~GAdIIDIGgeSTrPGa~~v~~~eE~~Rv~pvI~~l~~~~-~vpiSIDT----~~~~Va~aAl~a 104 (314)
T 2vef_A 30 FALEQALQQARKLIAEGASMLDIGGESTRPGSSYVEIEEEIQRVVPVIKAIRKES-DVLISIDT----WKSQVAEAALAA 104 (314)
T ss_dssp CHHHHHHHHHHHHHHTTCSEEEEECCC-----CHHHHHHHHHHHHHHHHHHHHHC-CCEEEEEC----SCHHHHHHHHHT
T ss_pred CCHHHHHHHHHHHHHCCCCEEEECCCcCCCCCCCCCHHHHHHHHHHHHHHHHhhC-CceEEEeC----CCHHHHHHHHHc
Confidence 456788889999999999988887632 11110 134567788888888763 55554422 256777777777
Q ss_pred CCCeee
Q 018731 206 GLDVFA 211 (351)
Q Consensus 206 G~~~i~ 211 (351)
|.+.|+
T Consensus 105 Ga~iIN 110 (314)
T 2vef_A 105 GADLVN 110 (314)
T ss_dssp TCCEEE
T ss_pred CCCEEE
Confidence 777765
No 103
>3a5f_A Dihydrodipicolinate synthase; TIM barrel, enzyme, amino-acid biosynthesis, cytoplasm, diaminopimelate biosynthesis, lyase; HET: KPI; 1.19A {Clostridium botulinum A} PDB: 3bi8_A* 3ird_A*
Probab=83.25 E-value=5.7 Score=35.77 Aligned_cols=81 Identities=16% Similarity=0.040 Sum_probs=52.2
Q ss_pred CCCCCH----HHHHHHHHcCCCeeecchhchHHHHhhhcCCCCCHHHHHHHHHHHHHhCCCCeEEEeeeeeC-CCCHHHH
Q 018731 191 DFRGDL----RAVETLVHSGLDVFAHNIETVKRLQRIVRDPRAGYEQSLEVLKHAKLSKKGLITKSSIMLGL-GESDDDL 265 (351)
Q Consensus 191 ~~~~~~----e~l~~L~~aG~~~i~~~ies~~~~~~~~r~~~~~~~~~l~~i~~~~~~~~Gi~v~~~~IvGl-gEt~e~~ 265 (351)
++ +|. ..++.+.++|++.+.+.=-|.+- ..-+.+++.+.++.+.+...| ..-+|+|. +.+.++.
T Consensus 17 dg-iD~~~l~~lv~~li~~Gv~gl~~~GttGE~-------~~Ls~~Er~~v~~~~~~~~~g---r~pvi~Gvg~~~t~~a 85 (291)
T 3a5f_A 17 TG-VDFDKLSELIEWHIKSKTDAIIVCGTTGEA-------TTMTETERKETIKFVIDKVNK---RIPVIAGTGSNNTAAS 85 (291)
T ss_dssp SS-BCHHHHHHHHHHHHHTTCCEEEESSGGGTG-------GGSCHHHHHHHHHHHHHHHTT---SSCEEEECCCSSHHHH
T ss_pred CC-cCHHHHHHHHHHHHHcCCCEEEECccccCh-------hhCCHHHHHHHHHHHHHHhCC---CCcEEEeCCcccHHHH
Confidence 45 664 45666677899887653222211 123667777777776653334 23477888 5577888
Q ss_pred HHHHHHHHhCCCCEEee
Q 018731 266 KEAMADLRSIDVDILTL 282 (351)
Q Consensus 266 ~~~l~~l~~lg~d~i~i 282 (351)
.+..+.+.+.|+|.+.+
T Consensus 86 i~la~~a~~~Gadavlv 102 (291)
T 3a5f_A 86 IAMSKWAESIGVDGLLV 102 (291)
T ss_dssp HHHHHHHHHTTCSEEEE
T ss_pred HHHHHHHHhcCCCEEEE
Confidence 88888888999987655
No 104
>3iwp_A Copper homeostasis protein CUTC homolog; conserved sequence motif, metal-binding site, polymorphism, metal binding protein; 2.50A {Homo sapiens}
Probab=83.18 E-value=6.3 Score=35.47 Aligned_cols=123 Identities=17% Similarity=0.216 Sum_probs=69.2
Q ss_pred HHHHHHHHHhCCCcEEEEeccCCCCCCCCcHHHHHHHHHHHHHhCCCcEEEEeecCC--CCC-HHHHHHHHHcCCCeeec
Q 018731 136 PENTAKAIASWGVDYIVLTSVDRDDIPDGGSGHFARTVKAMKKQKPDIMVECLTSDF--RGD-LRAVETLVHSGLDVFAH 212 (351)
Q Consensus 136 i~~~~~~~~~~G~~~I~ltgg~~~~l~~~~~~~~~~li~~ik~~~p~i~i~~~~~~~--~~~-~e~l~~L~~aG~~~i~~ 212 (351)
+.+.++.+.+.|++.|+|.--+++.-. +.+...++++..+. +.++. ...| ..+ .+.++.|.+.|+++|.-
T Consensus 113 M~~dI~~~~~~GAdGvVfG~L~~dg~i--D~~~~~~Li~~a~~----l~vTF-HRAFD~~~d~~~Ale~Li~lGvdrILT 185 (287)
T 3iwp_A 113 MKADIRLAKLYGADGLVFGALTEDGHI--DKELCMSLMAICRP----LPVTF-HRAFDMVHDPMAALETLLTLGFERVLT 185 (287)
T ss_dssp HHHHHHHHHHTTCSEEEECCBCTTSCB--CHHHHHHHHHHHTT----SCEEE-CGGGGGCSCHHHHHHHHHHHTCSEEEE
T ss_pred HHHHHHHHHHcCCCEEEEeeeCCCCCc--CHHHHHHHHHHcCC----CcEEE-ECchhccCCHHHHHHHHHHcCCCEEEC
Confidence 456777788999999999532322111 25667777765543 33332 2322 113 57899999999999854
Q ss_pred chhchHHHHhhhcCCCCCHHHHHHHHHHHHHhCCCCeEEEeeeeeCCCCHHHHHHHHHHHHhCCCCEEeee
Q 018731 213 NIETVKRLQRIVRDPRAGYEQSLEVLKHAKLSKKGLITKSSIMLGLGESDDDLKEAMADLRSIDVDILTLG 283 (351)
Q Consensus 213 ~ies~~~~~~~~r~~~~~~~~~l~~i~~~~~~~~Gi~v~~~~IvGlgEt~e~~~~~l~~l~~lg~d~i~i~ 283 (351)
+=. ..+..+-++.++.+.+...| ...+|.|=|=+.+.+.+.++ ..|++.++++
T Consensus 186 SG~------------~~~a~~Gl~~Lk~Lv~~a~~---rI~ImaGGGV~~~Ni~~l~~---~tG~~~~H~S 238 (287)
T 3iwp_A 186 SGC------------DSSALEGLPLIKRLIEQAKG---RIVVMPGGGITDRNLQRILE---GSGATEFHCS 238 (287)
T ss_dssp CTT------------SSSTTTTHHHHHHHHHHHTT---SSEEEECTTCCTTTHHHHHH---HHCCSEEEEC
T ss_pred CCC------------CCChHHhHHHHHHHHHHhCC---CCEEEECCCcCHHHHHHHHH---hhCCCEEeEC
Confidence 211 01112223333333321122 23467776777776655543 5789888874
No 105
>2qf7_A Pyruvate carboxylase protein; multi-domain, multi-functional, biotin-dependent, ligase; HET: KCX COA AGS; 2.00A {Rhizobium etli} PDB: 3tw6_A* 3tw7_A*
Probab=83.08 E-value=36 Score=36.83 Aligned_cols=135 Identities=9% Similarity=0.046 Sum_probs=85.3
Q ss_pred CCCchhHHHHHHHHHhCC--CcEEEEeccCCCC-----CCCCcHHHHHHHHHHHHHhCCCcEEEEeecC----CC-----
Q 018731 130 PPDPMEPENTAKAIASWG--VDYIVLTSVDRDD-----IPDGGSGHFARTVKAMKKQKPDIMVECLTSD----FR----- 193 (351)
Q Consensus 130 ~~~~eei~~~~~~~~~~G--~~~I~ltgg~~~~-----l~~~~~~~~~~li~~ik~~~p~i~i~~~~~~----~~----- 193 (351)
+++.++.+++++.+.+.| +..|-+.||...+ +.... .+.++.+++..|+..+.++..+ +.
T Consensus 569 ~~~~~dkl~ia~~L~~~gv~~~~iE~~gga~f~~~~~f~~~~p----~e~l~~~~~~~~~~~~~~l~R~~n~vg~~~~~~ 644 (1165)
T 2qf7_A 569 RMRTYDIARIAGTYSHALPNLLSLECWGGATFDVSMRFLTEDP----WERLALIREGAPNLLLQMLLRGANGVGYTNYPD 644 (1165)
T ss_dssp CCCHHHHHHHHHHHHHHCTTCSEEEEEETTHHHHHHHHHCCCH----HHHHHHHHHHCTTSEEEEEEETTTBTCSSCCCH
T ss_pred cCCHHHHHHHHHHHHHhCCCceEEEeCCCCccHHHHhhcCCCH----HHHHHHHHHHchhhHHHHHhccccccccccCCc
Confidence 356788889999998885 5446554443210 11111 2344555655677776655321 11
Q ss_pred -CCHHHHHHHHHcCCCeeecchhchHHHHhhhcCCCCCHHHHHHHHHHHHHhCCCCeEEEeeeee--C----C--CCHHH
Q 018731 194 -GDLRAVETLVHSGLDVFAHNIETVKRLQRIVRDPRAGYEQSLEVLKHAKLSKKGLITKSSIMLG--L----G--ESDDD 264 (351)
Q Consensus 194 -~~~e~l~~L~~aG~~~i~~~ies~~~~~~~~r~~~~~~~~~l~~i~~~~~~~~Gi~v~~~~IvG--l----g--Et~e~ 264 (351)
...+.++...++|++.+.+- .+. .+.+.....++.+++ .|..+...+.+. + . .+.+.
T Consensus 645 ~~~~~~i~~a~~~g~d~irif-~sl-----------~~~~~~~~~i~~~~~--~g~~v~~~i~~~~~~~d~~r~~~~~~~ 710 (1165)
T 2qf7_A 645 NVVKYFVRQAAKGGIDLFRVF-DCL-----------NWVENMRVSMDAIAE--ENKLCEAAICYTGDILNSARPKYDLKY 710 (1165)
T ss_dssp HHHHHHHHHHHHHTCCEEEEE-CTT-----------CCGGGGHHHHHHHHH--TTCEEEEEEECCSCTTCTTSGGGCHHH
T ss_pred hhHHHHHHHHHhcCcCEEEEE-eeH-----------HHHHHHHHHHHHHHh--ccceEEEEEEEeccccCCCCCCCCHHH
Confidence 02467889999999997652 111 133455567778888 888776665443 1 1 46788
Q ss_pred HHHHHHHHHhCCCCEEee
Q 018731 265 LKEAMADLRSIDVDILTL 282 (351)
Q Consensus 265 ~~~~l~~l~~lg~d~i~i 282 (351)
+.+.++.+.++|++.+.+
T Consensus 711 ~~~~~~~~~~~Ga~~i~l 728 (1165)
T 2qf7_A 711 YTNLAVELEKAGAHIIAV 728 (1165)
T ss_dssp HHHHHHHHHHTTCSEEEE
T ss_pred HHHHHHHHHHcCCCEEEE
Confidence 899999999999998877
No 106
>3mcm_A 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase/dihydropteroate...; folate, TIM barrel, synthase, HPPK, DHPS; 2.20A {Francisella tularensis subsp} PDB: 3mcn_A* 3mco_A*
Probab=83.03 E-value=3.4 Score=39.61 Aligned_cols=93 Identities=13% Similarity=0.141 Sum_probs=57.4
Q ss_pred eEEEEeeccCCCCCCcCcccCCCCCCCCCCchhHHHHHHHHHhCCCcEEEEeccC-CCC---CC-CCcHHHHHHHHHHHH
Q 018731 103 TATIMLLGDTCTRGCRFCAVKTSRNPAPPDPMEPENTAKAIASWGVDYIVLTSVD-RDD---IP-DGGSGHFARTVKAMK 177 (351)
Q Consensus 103 ~~~~i~~s~gC~~~C~FC~~~~~~~~~~~~~eei~~~~~~~~~~G~~~I~ltgg~-~~~---l~-~~~~~~~~~li~~ik 177 (351)
..+++++|+- +|+.+ . .+.+++.+.++++.+.|+.-|-+.|.. .+. .+ ..+.+++..+++.++
T Consensus 193 vMGIlNvTPD--------SFsDg--g--~~~~~al~~A~~mv~~GAdIIDIGgeSTrPGa~~Vs~~EE~~Rv~pvI~~l~ 260 (442)
T 3mcm_A 193 RMGIVNLSNQ--------SFSDG--N--FDDNQRKLNLDELIQSGAEIIDIGAESTKPDAKPISIEEEFNKLNEFLEYFK 260 (442)
T ss_dssp EEEEEECSSC--------C-CCC--S--SCCCHHHHHHHHHHHHTCSEEEEECCCCCC----CCHHHHHHHHHHHHHHHH
T ss_pred EEEEEeCCCC--------CCCCC--C--CCHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHH
Confidence 5667776653 22222 2 567888899999999999988886532 110 11 122445666788887
Q ss_pred Hh---CC-CcEEEEeecCCCCCHHHHHHHHH--cCCCe-ee
Q 018731 178 KQ---KP-DIMVECLTSDFRGDLRAVETLVH--SGLDV-FA 211 (351)
Q Consensus 178 ~~---~p-~i~i~~~~~~~~~~~e~l~~L~~--aG~~~-i~ 211 (351)
+. .+ ++.|.+=| ...+.++.-.+ +|.+. |+
T Consensus 261 ~~~~~~~~~vpISIDT----~~~~VaeaAL~~~aGa~i~IN 297 (442)
T 3mcm_A 261 SQLANLIYKPLVSIDT----RKLEVMQKILAKHHDIIWMIN 297 (442)
T ss_dssp HHTTTCSSCCEEEEEC----CCHHHHHHHHHHHGGGCCEEE
T ss_pred hhccccCCCCeEEEeC----CCHHHHHHHHhhCCCCCEEEE
Confidence 72 22 55554422 26788888888 88887 53
No 107
>3s5o_A 4-hydroxy-2-oxoglutarate aldolase, mitochondrial; beta barrel, schiff base, hydroxyproline metabolis; HET: KPI; 1.97A {Homo sapiens} SCOP: c.1.10.0 PDB: 3s5n_A
Probab=82.94 E-value=16 Score=33.02 Aligned_cols=76 Identities=14% Similarity=0.131 Sum_probs=43.4
Q ss_pred HHHHHHHHcCCCeeecchhchHHHHhhhcCCCCCHHHHHHHHHHHHHhCCCCeEEEeeeeeC-CCCHHHHHHHHHHHHhC
Q 018731 197 RAVETLVHSGLDVFAHNIETVKRLQRIVRDPRAGYEQSLEVLKHAKLSKKGLITKSSIMLGL-GESDDDLKEAMADLRSI 275 (351)
Q Consensus 197 e~l~~L~~aG~~~i~~~ies~~~~~~~~r~~~~~~~~~l~~i~~~~~~~~Gi~v~~~~IvGl-gEt~e~~~~~l~~l~~l 275 (351)
..++.+.++|++.+.+.=-|.+- ..-+.++..+.++.+.+...| ..-+|+|. +.+.++..+..+.+.+.
T Consensus 39 ~lv~~li~~Gv~Gl~v~GtTGE~-------~~Ls~~Er~~v~~~~~~~~~g---r~pviaGvg~~~t~~ai~la~~A~~~ 108 (307)
T 3s5o_A 39 ENLHKLGTFPFRGFVVQGSNGEF-------PFLTSSERLEVVSRVRQAMPK---NRLLLAGSGCESTQATVEMTVSMAQV 108 (307)
T ss_dssp HHHHHHTTSCCSEEEESSGGGTG-------GGSCHHHHHHHHHHHHHTSCT---TSEEEEECCCSSHHHHHHHHHHHHHT
T ss_pred HHHHHHHHcCCCEEEECccccch-------hhCCHHHHHHHHHHHHHHcCC---CCcEEEecCCCCHHHHHHHHHHHHHc
Confidence 34555556677776543222211 123566666666666653222 23456677 45666677777777777
Q ss_pred CCCEEee
Q 018731 276 DVDILTL 282 (351)
Q Consensus 276 g~d~i~i 282 (351)
|+|.+.+
T Consensus 109 Gadavlv 115 (307)
T 3s5o_A 109 GADAAMV 115 (307)
T ss_dssp TCSEEEE
T ss_pred CCCEEEE
Confidence 7776555
No 108
>1vrd_A Inosine-5'-monophosphate dehydrogenase; TM1347, structural G joint center for structural genomics, JCSG, protein structu initiative, PSI; 2.18A {Thermotoga maritima} SCOP: c.1.5.1
Probab=82.30 E-value=29 Score=33.45 Aligned_cols=134 Identities=17% Similarity=0.200 Sum_probs=78.6
Q ss_pred hhHHHHHHHHHhCCCcEEEEeccCCCCCCCCcHHHHHHHHHHHHHhCCCcEEEEeecCCCCCHHHHHHHHHcCCCeeecc
Q 018731 134 MEPENTAKAIASWGVDYIVLTSVDRDDIPDGGSGHFARTVKAMKKQKPDIMVECLTSDFRGDLRAVETLVHSGLDVFAHN 213 (351)
Q Consensus 134 eei~~~~~~~~~~G~~~I~ltgg~~~~l~~~~~~~~~~li~~ik~~~p~i~i~~~~~~~~~~~e~l~~L~~aG~~~i~~~ 213 (351)
.+..+.++.+.+.|++.+.+..... . .....+.++.+++..|++.+-+ .+ ..+.+.++.+.++|+|.|.++
T Consensus 236 ~~~~~~a~~l~~aGvd~v~i~~~~G--~----~~~~~e~i~~i~~~~p~~pvi~--g~-~~t~e~a~~l~~~G~d~I~v~ 306 (494)
T 1vrd_A 236 PETMERVEKLVKAGVDVIVIDTAHG--H----SRRVIETLEMIKADYPDLPVVA--GN-VATPEGTEALIKAGADAVKVG 306 (494)
T ss_dssp TTHHHHHHHHHHTTCSEEEECCSCC--S----SHHHHHHHHHHHHHCTTSCEEE--EE-ECSHHHHHHHHHTTCSEEEEC
T ss_pred HhHHHHHHHHHHhCCCEEEEEecCC--c----hHHHHHHHHHHHHHCCCceEEe--CC-cCCHHHHHHHHHcCCCEEEEc
Confidence 3446677788889999988854432 1 2567889999999877765533 11 247888899999999999876
Q ss_pred hhchH-HHHhhhcCCCCCHHHHHHHHHHHHHhCCCCeEEEeeeeeCCCCHHHHHHHHHHHHhCCCCEEeeec
Q 018731 214 IETVK-RLQRIVRDPRAGYEQSLEVLKHAKLSKKGLITKSSIMLGLGESDDDLKEAMADLRSIDVDILTLGQ 284 (351)
Q Consensus 214 ies~~-~~~~~~r~~~~~~~~~l~~i~~~~~~~~Gi~v~~~~IvGlgEt~e~~~~~l~~l~~lg~d~i~i~~ 284 (351)
.+... ...+...+.+...-..+..+..+.+. .++.+-++ |=-.+.+++.+.+. +|++.+.++.
T Consensus 307 ~~~G~~~~~~~~~~~g~p~~~~l~~v~~~~~~-~~ipvia~---GGI~~~~di~kala----~GAd~V~iGr 370 (494)
T 1vrd_A 307 VGPGSICTTRVVAGVGVPQLTAVMECSEVARK-YDVPIIAD---GGIRYSGDIVKALA----AGAESVMVGS 370 (494)
T ss_dssp SSCSTTCHHHHHHCCCCCHHHHHHHHHHHHHT-TTCCEEEE---SCCCSHHHHHHHHH----TTCSEEEESH
T ss_pred CCCCccccccccCCCCccHHHHHHHHHHHHhh-cCCCEEEE---CCcCCHHHHHHHHH----cCCCEEEECH
Confidence 54321 00011111122233333333333320 35553221 21246677766653 6999888764
No 109
>1ydo_A HMG-COA lyase; TIM-barrel protein, structural genomics, PSI, protein struct initiative, northeast structural genomics consortium, NESG,; 2.71A {Bacillus subtilis subsp}
Probab=82.30 E-value=2.8 Score=38.18 Aligned_cols=126 Identities=13% Similarity=0.080 Sum_probs=75.9
Q ss_pred CCchhHHHHHHHHHhCCCcEEEEeccCCCCCCCCcHHHHHHHHHHHHHhCCCcEEEEe-ecCCCCCHHHHHHHHHcCCCe
Q 018731 131 PDPMEPENTAKAIASWGVDYIVLTSVDRDDIPDGGSGHFARTVKAMKKQKPDIMVECL-TSDFRGDLRAVETLVHSGLDV 209 (351)
Q Consensus 131 ~~~eei~~~~~~~~~~G~~~I~ltgg~~~~l~~~~~~~~~~li~~ik~~~p~i~i~~~-~~~~~~~~e~l~~L~~aG~~~ 209 (351)
.+++.+.+.++.+.+.|++.|.|..-..-.. ...+.++++.+++..|++.+.+- .++.-+--.-.-.-.++|++.
T Consensus 154 ~~~~~~~~~~~~~~~~Ga~~i~l~DT~G~~~----P~~v~~lv~~l~~~~~~~~l~~H~Hnd~Gla~AN~laAv~aGa~~ 229 (307)
T 1ydo_A 154 VPIEQVIRLSEALFEFGISELSLGDTIGAAN----PAQVETVLEALLARFPANQIALHFHDTRGTALANMVTALQMGITV 229 (307)
T ss_dssp CCHHHHHHHHHHHHHHTCSCEEEECSSCCCC----HHHHHHHHHHHHTTSCGGGEEEECBGGGSCHHHHHHHHHHHTCCE
T ss_pred CCHHHHHHHHHHHHhcCCCEEEEcCCCCCcC----HHHHHHHHHHHHHhCCCCeEEEEECCCCchHHHHHHHHHHhCCCE
Confidence 4678889999999999999999953322212 47899999999998876544432 233222333344456789999
Q ss_pred eecchhchHH--HHhhhcCCCCCHHHHHHHHHHHHHhCCCCeEEEeeeeeCCCCHHHHHHHHHHHHh
Q 018731 210 FAHNIETVKR--LQRIVRDPRAGYEQSLEVLKHAKLSKKGLITKSSIMLGLGESDDDLKEAMADLRS 274 (351)
Q Consensus 210 i~~~ies~~~--~~~~~r~~~~~~~~~l~~i~~~~~~~~Gi~v~~~~IvGlgEt~e~~~~~l~~l~~ 274 (351)
|...+-.+-+ +-..-. .....++.+..++ . .|+.+ |-+.+.+.++.+++.+
T Consensus 230 vd~tv~GlGecp~a~gra-GN~~~E~lv~~L~---~--~g~~t--------~idl~~L~~~~~~v~~ 282 (307)
T 1ydo_A 230 FDGSAGGLGGCPYAPGSS-GNAATEDIVYMLE---Q--MDIKT--------NVKLEKLLSAAKWIEE 282 (307)
T ss_dssp EEEBGGGCCEETTEEEEE-CBCBHHHHHHHHH---H--TTCBC--------CCCHHHHHHHHHHHHH
T ss_pred EEEcccccCCCCCCCCCC-CChhHHHHHHHHH---h--cCCCC--------CcCHHHHHHHHHHHHH
Confidence 9765543211 100001 1236677776654 3 45542 3456667666666654
No 110
>3r2g_A Inosine 5'-monophosphate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.94A {Legionella pneumophila subsp}
Probab=82.28 E-value=32 Score=31.96 Aligned_cols=131 Identities=17% Similarity=0.210 Sum_probs=79.2
Q ss_pred hhHHHHHHHHHhCCCcEEEEeccCCCCCCCCcHHHHHHHHHHHHHhCCCcEEEEeecCCCCCHHHHHHHHHcCCCeeecc
Q 018731 134 MEPENTAKAIASWGVDYIVLTSVDRDDIPDGGSGHFARTVKAMKKQKPDIMVECLTSDFRGDLRAVETLVHSGLDVFAHN 213 (351)
Q Consensus 134 eei~~~~~~~~~~G~~~I~ltgg~~~~l~~~~~~~~~~li~~ik~~~p~i~i~~~~~~~~~~~e~l~~L~~aG~~~i~~~ 213 (351)
+...+.++.+.+.|++.|.+..... . ...+.+.++.+++..|++.|-+-. ..+.+.+..+.++|+|.|.++
T Consensus 99 ~~~~e~~~~a~~aGvdvI~id~a~G--~----~~~~~e~I~~ir~~~~~~~Vi~G~---V~T~e~A~~a~~aGaD~I~Vg 169 (361)
T 3r2g_A 99 ENELQRAEALRDAGADFFCVDVAHA--H----AKYVGKTLKSLRQLLGSRCIMAGN---VATYAGADYLASCGADIIKAG 169 (361)
T ss_dssp HHHHHHHHHHHHTTCCEEEEECSCC--S----SHHHHHHHHHHHHHHTTCEEEEEE---ECSHHHHHHHHHTTCSEEEEC
T ss_pred HHHHHHHHHHHHcCCCEEEEeCCCC--C----cHhHHHHHHHHHHhcCCCeEEEcC---cCCHHHHHHHHHcCCCEEEEc
Confidence 4456678888889999777743222 1 257788999999987776654311 137889999999999999876
Q ss_pred hhchHHH-HhhhcCCCCCHHHHHHHHHHHHHhCCCCeEEEeeee-eCCCCHHHHHHHHHHHHhCCCCEEeeeccc
Q 018731 214 IETVKRL-QRIVRDPRAGYEQSLEVLKHAKLSKKGLITKSSIML-GLGESDDDLKEAMADLRSIDVDILTLGQYL 286 (351)
Q Consensus 214 ies~~~~-~~~~r~~~~~~~~~l~~i~~~~~~~~Gi~v~~~~Iv-GlgEt~e~~~~~l~~l~~lg~d~i~i~~~l 286 (351)
....... .+...+.+.. .+..+..+.+ .-- -+|. |=-.+.+++.+.+. +|.|.+.++..+
T Consensus 170 ~g~G~~~~tr~~~g~g~p---~l~aI~~~~~--~~~----PVIAdGGI~~~~di~kALa----~GAd~V~iGr~f 231 (361)
T 3r2g_A 170 IGGGSVCSTRIKTGFGVP---MLTCIQDCSR--ADR----SIVADGGIKTSGDIVKALA----FGADFVMIGGML 231 (361)
T ss_dssp CSSSSCHHHHHHHCCCCC---HHHHHHHHTT--SSS----EEEEESCCCSHHHHHHHHH----TTCSEEEESGGG
T ss_pred CCCCcCccccccCCccHH---HHHHHHHHHH--hCC----CEEEECCCCCHHHHHHHHH----cCCCEEEEChHH
Confidence 5432111 1111111222 3455555544 211 2232 21246777766654 799999887544
No 111
>4djd_D C/Fe-SP, corrinoid/iron-sulfur protein small subunit; TIM barrel, rossmann fold, B12-dependent methyltransferase; HET: B12; 2.38A {Moorella thermoacetica} PDB: 4dje_D* 4djf_D*
Probab=82.12 E-value=29 Score=31.72 Aligned_cols=137 Identities=17% Similarity=0.143 Sum_probs=84.4
Q ss_pred hhHHHHHHHHH-hCCCcEEEEec--cCCCCCCCCcHHHHHHHHHHHHHhCCCcEEEEeec-CCCCCHHHHHHHHHcCCCe
Q 018731 134 MEPENTAKAIA-SWGVDYIVLTS--VDRDDIPDGGSGHFARTVKAMKKQKPDIMVECLTS-DFRGDLRAVETLVHSGLDV 209 (351)
Q Consensus 134 eei~~~~~~~~-~~G~~~I~ltg--g~~~~l~~~~~~~~~~li~~ik~~~p~i~i~~~~~-~~~~~~e~l~~L~~aG~~~ 209 (351)
+++.+.++... +.|++.|-+.+ ..| ...+...+.+.++++.+.+.. ++.+.+-.. +-..+.+.++.-.++|.+.
T Consensus 80 ~~~~~~A~~~v~~~GAdiIDIg~eStrP-~~~~vs~ee~~~~V~~v~~~~-~vPlsIDg~~~~T~~~eV~eaAleagag~ 157 (323)
T 4djd_D 80 NEPGRWAQKCVAEYGADLIYLKLDGADP-EGANHSVDQCVATVKEVLQAV-GVPLVVVGCGDVEKDHEVLEAVAEAAAGE 157 (323)
T ss_dssp TCHHHHHHHHHHTTCCSEEEEECGGGCT-TTTCCCHHHHHHHHHHHHHHC-CSCEEEECCSCHHHHHHHHHHHHHHTTTS
T ss_pred HhHHHHHHHHHHHcCCCEEEEcCccCCC-CCCCCCHHHHHHHHHHHHhhC-CceEEEECCCCCCCCHHHHHHHHHhcCCC
Confidence 45778888777 89999998864 333 222334567888899988763 555544200 0002578999988888652
Q ss_pred ---ee-cchhchHHHHhhhcC--------CCCCHHHHHHHHHHHHHhCCCCe---EEEeeeee-CCCCHHHHHHHHHHHH
Q 018731 210 ---FA-HNIETVKRLQRIVRD--------PRAGYEQSLEVLKHAKLSKKGLI---TKSSIMLG-LGESDDDLKEAMADLR 273 (351)
Q Consensus 210 ---i~-~~ies~~~~~~~~r~--------~~~~~~~~l~~i~~~~~~~~Gi~---v~~~~IvG-lgEt~e~~~~~l~~l~ 273 (351)
|+ ++.+..+.+...... ...+.+-..+.++.+.+ .|+. +-.|-.+| +|.+.++-.++++.++
T Consensus 158 ~~lINsv~~~~~~~m~~laa~~g~~vVlmh~~d~~~~~~l~~~a~~--~GI~~e~IIlDPg~g~fgk~~e~~l~~l~~ir 235 (323)
T 4djd_D 158 NLLLGNAEQENYKSLTAACMVHKHNIIARSPLDINICKQLNILINE--MNLPLDHIVIDPSIGGLGYGIEYSFSIMERIR 235 (323)
T ss_dssp CCEEEEEBTTBCHHHHHHHHHHTCEEEEECSSCHHHHHHHHHHHHT--TTCCGGGEEEECCCCCTTTTHHHHHHHHHHHH
T ss_pred CCeEEECCcccHHHHHHHHHHhCCeEEEEccchHHHHHHHHHHHHH--cCCCHHHEEEeCCCccccCCHHHHHHHHHHHH
Confidence 32 233333333221110 01245555556667777 8993 66666677 5889998888888887
Q ss_pred h
Q 018731 274 S 274 (351)
Q Consensus 274 ~ 274 (351)
.
T Consensus 236 ~ 236 (323)
T 4djd_D 236 L 236 (323)
T ss_dssp H
T ss_pred H
Confidence 5
No 112
>3dz1_A Dihydrodipicolinate synthase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI2, structural genomics; 1.87A {Rhodopseudomonas palustris} SCOP: c.1.10.0
Probab=82.03 E-value=20 Score=32.46 Aligned_cols=98 Identities=12% Similarity=0.119 Sum_probs=62.6
Q ss_pred HHHHHHHHcCCCeeecchhchHHHHhhhcCCCCCHHHHHHHHHHHHHhCCCCeEEEeeeeeC-CCCHHHHHHHHHHHHhC
Q 018731 197 RAVETLVHSGLDVFAHNIETVKRLQRIVRDPRAGYEQSLEVLKHAKLSKKGLITKSSIMLGL-GESDDDLKEAMADLRSI 275 (351)
Q Consensus 197 e~l~~L~~aG~~~i~~~ies~~~~~~~~r~~~~~~~~~l~~i~~~~~~~~Gi~v~~~~IvGl-gEt~e~~~~~l~~l~~l 275 (351)
..++.+.++|++.+.+.=-|.+- ..-+.+++.+.++.+.+.. | ..-+|+|. +.+.++..+..+.+.++
T Consensus 33 ~lv~~li~~Gv~Gl~v~GtTGE~-------~~Lt~~Er~~v~~~~v~~~-g---rvpViaGvg~~~t~~ai~la~~A~~~ 101 (313)
T 3dz1_A 33 RLTDFYAEVGCEGVTVLGILGEA-------PKLDAAEAEAVATRFIKRA-K---SMQVIVGVSAPGFAAMRRLARLSMDA 101 (313)
T ss_dssp HHHHHHHHTTCSEEEESTGGGTG-------GGSCHHHHHHHHHHHHHHC-T---TSEEEEECCCSSHHHHHHHHHHHHHH
T ss_pred HHHHHHHHCCCCEEEeCccCcCh-------hhCCHHHHHHHHHHHHHHc-C---CCcEEEecCCCCHHHHHHHHHHHHHc
Confidence 56677778899987654222221 1347778888888887743 3 34578888 56788888888999999
Q ss_pred CCCEEeeecccCCCCCcccccCCCCHHH-HHHHHHHHHhcC
Q 018731 276 DVDILTLGQYLQPTPLHLTVKEYVTPEK-FDFWKAYGESIG 315 (351)
Q Consensus 276 g~d~i~i~~~l~PTp~~~~~~~~v~~~e-~~~~~~~~~~~G 315 (351)
|+|.+.+. +|.+. .+.++ +..++++++..+
T Consensus 102 Gadavlv~-----~P~~~-----~s~~~l~~~f~~va~a~~ 132 (313)
T 3dz1_A 102 GAAGVMIA-----PPPSL-----RTDEQITTYFRQATEAIG 132 (313)
T ss_dssp TCSEEEEC-----CCTTC-----CSHHHHHHHHHHHHHHHC
T ss_pred CCCEEEEC-----CCCCC-----CCHHHHHHHHHHHHHhCC
Confidence 99877662 22221 23333 445666666655
No 113
>1ka9_F Imidazole glycerol phosphtate synthase; riken structural genomics/proteomics initiative, RSGI, structural genomics, transferase; 2.30A {Thermus thermophilus} SCOP: c.1.2.1
Probab=81.97 E-value=5.5 Score=34.62 Aligned_cols=78 Identities=18% Similarity=0.177 Sum_probs=55.1
Q ss_pred chhHHHHHHHHHhCCCcEEEEeccCCCCCCCCcHHHHHHHHHHHHHhCCCcEEEEeecCCCCCHHHHHHHHHcCCCeeec
Q 018731 133 PMEPENTAKAIASWGVDYIVLTSVDRDDIPDGGSGHFARTVKAMKKQKPDIMVECLTSDFRGDLRAVETLVHSGLDVFAH 212 (351)
Q Consensus 133 ~eei~~~~~~~~~~G~~~I~ltgg~~~~l~~~~~~~~~~li~~ik~~~p~i~i~~~~~~~~~~~e~l~~L~~aG~~~i~~ 212 (351)
..++.+.++.+.+.|++.|.++..+.. . .+.....++++.+++.. ++.+-+ .++..+.+.++.+.++|+|.+.+
T Consensus 30 ~~d~~~~a~~~~~~Gad~i~v~d~~~~-~--~~~~~~~~~i~~i~~~~-~iPvi~--~Ggi~~~~~~~~~~~~Gad~V~l 103 (252)
T 1ka9_F 30 AGDPVEAARAYDEAGADELVFLDISAT-H--EERAILLDVVARVAERV-FIPLTV--GGGVRSLEDARKLLLSGADKVSV 103 (252)
T ss_dssp TTCHHHHHHHHHHHTCSCEEEEECCSS-T--TCHHHHHHHHHHHHTTC-CSCEEE--ESSCCSHHHHHHHHHHTCSEEEE
T ss_pred cCCHHHHHHHHHHcCCCEEEEEcCCcc-c--cCccccHHHHHHHHHhC-CCCEEE--ECCcCCHHHHHHHHHcCCCEEEE
Confidence 346777888888899999988754421 1 12345667888888753 555543 45666889999999999999988
Q ss_pred chhc
Q 018731 213 NIET 216 (351)
Q Consensus 213 ~ies 216 (351)
+-..
T Consensus 104 g~~~ 107 (252)
T 1ka9_F 104 NSAA 107 (252)
T ss_dssp CHHH
T ss_pred ChHH
Confidence 7433
No 114
>1m5w_A Pyridoxal phosphate biosynthetic protein PDXJ; TIM barrel, protein-substrate complex, multi-binding states; HET: DXP; 1.96A {Escherichia coli} SCOP: c.1.24.1 PDB: 1ho1_A 1ho4_A* 1ixn_A* 1ixo_A* 1ixp_A 1ixq_A 3f4n_A*
Probab=81.69 E-value=3.5 Score=36.03 Aligned_cols=132 Identities=15% Similarity=0.196 Sum_probs=81.3
Q ss_pred hhHHHHHHHHHhCCCcEEEEeccCCC--------CCCCCcHHHHHHHHHHHHHhCCCcEEEEeecCCCCCHHHHHHHHHc
Q 018731 134 MEPENTAKAIASWGVDYIVLTSVDRD--------DIPDGGSGHFARTVKAMKKQKPDIMVECLTSDFRGDLRAVETLVHS 205 (351)
Q Consensus 134 eei~~~~~~~~~~G~~~I~ltgg~~~--------~l~~~~~~~~~~li~~ik~~~p~i~i~~~~~~~~~~~e~l~~L~~a 205 (351)
+|+++++.. .....++|.--.+. ++. ++.+.+.++++.+++. ++.+..+... +++.++.-++.
T Consensus 77 ~emi~ia~~---~kP~~vtLVPE~r~e~TTegGldv~-~~~~~l~~~i~~L~~~--GIrVSLFIDp---d~~qi~aA~~~ 147 (243)
T 1m5w_A 77 EEMLAIAVE---TKPHFCCLVPEKRQEVTTEGGLDVA-GQRDKMRDACKRLADA--GIQVSLFIDA---DEEQIKAAAEV 147 (243)
T ss_dssp HHHHHHHHH---HCCSEEEECCCCSSCSSCCSCCCSG-GGHHHHHHHHHHHHHT--TCEEEEEECS---CHHHHHHHHHT
T ss_pred HHHHHHHHH---cCCCEEEECCCCCCCcCCCcchhHH-hhHHHHHHHHHHHHHC--CCEEEEEeCC---CHHHHHHHHHh
Confidence 455555544 35667777322111 121 2467889999999987 7888776531 78999999999
Q ss_pred CCCeeecchhchHHHH-hhhcCCCCCHHHHHHHHHHHHHhCCCCeEEEeeeeeCCCCHHHHHHHHHHHHhC-CCCEEeee
Q 018731 206 GLDVFAHNIETVKRLQ-RIVRDPRAGYEQSLEVLKHAKLSKKGLITKSSIMLGLGESDDDLKEAMADLRSI-DVDILTLG 283 (351)
Q Consensus 206 G~~~i~~~ies~~~~~-~~~r~~~~~~~~~l~~i~~~~~~~~Gi~v~~~~IvGlgEt~e~~~~~l~~l~~l-g~d~i~i~ 283 (351)
|.++|-+.-..+-.-+ ..-+ ...++.+.++.+.+++ .|+.|++ |+|-|.+.+... ..+ ++..++++
T Consensus 148 GA~~IELhTG~Ya~a~~~~~~--~~el~~i~~aa~~A~~--lGL~VnA----GHgL~y~Nv~~i----a~ip~i~ElnIG 215 (243)
T 1m5w_A 148 GAPFIEIHTGCYADAKTDAEQ--AQELARIAKAATFAAS--LGLKVNA----GHGLTYHNVKAI----AAIPEMHELNIG 215 (243)
T ss_dssp TCSEEEEECHHHHHCCSHHHH--HHHHHHHHHHHHHHHH--TTCEEEE----ESSCCTTTHHHH----HTCTTEEEEEEC
T ss_pred CcCEEEEechhhhcCCCchhH--HHHHHHHHHHHHHHHH--cCCEEec----CCCCCHHHHHHH----hhCCCCeEEccC
Confidence 9999976543322211 0000 1356777888888888 9998776 455555554333 122 35567776
Q ss_pred ccc
Q 018731 284 QYL 286 (351)
Q Consensus 284 ~~l 286 (351)
..+
T Consensus 216 Hai 218 (243)
T 1m5w_A 216 HAI 218 (243)
T ss_dssp HHH
T ss_pred HHH
Confidence 554
No 115
>3no5_A Uncharacterized protein; PFAM DUF849 domain containing protein, structural genomics, center for structural genomics, JCSG; HET: MSE; 1.90A {Ralstonia eutropha}
Probab=81.68 E-value=6.1 Score=35.40 Aligned_cols=84 Identities=15% Similarity=0.245 Sum_probs=51.9
Q ss_pred CCCCchhHHHHHHHHHhCCCcEEEEeccCCCCCCCCcHHHHHHHHHHHHHhCCCcEEEEeecCCC-CCHHHHHHHHHcCC
Q 018731 129 APPDPMEPENTAKAIASWGVDYIVLTSVDRDDIPDGGSGHFARTVKAMKKQKPDIMVECLTSDFR-GDLRAVETLVHSGL 207 (351)
Q Consensus 129 ~~~~~eei~~~~~~~~~~G~~~I~ltgg~~~~l~~~~~~~~~~li~~ik~~~p~i~i~~~~~~~~-~~~e~l~~L~~aG~ 207 (351)
.+.+++|+.+.+.+..+.|..-+.+=-=+++--+..+.+.|.++++.|++..|++-|...|.... ..++. ..+.+...
T Consensus 25 lPvTpeEia~~A~~~~~AGAaivHlHvRd~~G~~s~d~~~~~e~~~~IR~~~pd~ii~~Ttg~~~~~~e~R-~~~~~~~P 103 (275)
T 3no5_A 25 VPITVSEQVESTQAAFEAGATLVHLHVRNDDETPTSNPDRFALVLEGIRKHAPGMITQVSTGGRSGAGNER-GAMLSLRP 103 (275)
T ss_dssp SCCSHHHHHHHHHHHHHHTCCEEEECEECTTSCEECCHHHHHHHHHHHHHHSTTCEEEECCCCCTTCCGGG-GTTGGGCC
T ss_pred CCCCHHHHHHHHHHHHHccCcEEEEeecCCCCCcCCCHHHHHHHHHHHHHhCCCeEEEeCCCCCCCCHHHH-hhHhhcCC
Confidence 45788999999999999998866662111110111236899999999999888877765432211 11222 33345566
Q ss_pred Ceeecc
Q 018731 208 DVFAHN 213 (351)
Q Consensus 208 ~~i~~~ 213 (351)
+..+++
T Consensus 104 e~aSl~ 109 (275)
T 3no5_A 104 DMASLA 109 (275)
T ss_dssp SEEEEE
T ss_pred CEEEec
Confidence 776643
No 116
>1nvm_A HOA, 4-hydroxy-2-oxovalerate aldolase; sequestered tunnel, substrate channeling; HET: NAD; 1.70A {Pseudomonas SP} SCOP: a.5.7.1 c.1.10.5
Probab=81.59 E-value=7.9 Score=35.71 Aligned_cols=122 Identities=15% Similarity=0.110 Sum_probs=77.9
Q ss_pred CCchhHHHHHHHHHhCCCcEEEEeccCCCCCCCCcHHHHHHHHHHHHHhCC-CcEEEEe-ecCCCCCHHHHHHHHHcCCC
Q 018731 131 PDPMEPENTAKAIASWGVDYIVLTSVDRDDIPDGGSGHFARTVKAMKKQKP-DIMVECL-TSDFRGDLRAVETLVHSGLD 208 (351)
Q Consensus 131 ~~~eei~~~~~~~~~~G~~~I~ltgg~~~~l~~~~~~~~~~li~~ik~~~p-~i~i~~~-~~~~~~~~e~l~~L~~aG~~ 208 (351)
.+++.+.+.++.+.+.|+..|.+.+-..-.. ...+.++++.+++..| ++.+.+- +++.-+--.....-.++|++
T Consensus 146 ~~~e~~~~ia~~~~~~Ga~~i~l~DT~G~~~----P~~v~~lv~~l~~~~~~~~pi~~H~Hn~~G~avAn~laA~~aGa~ 221 (345)
T 1nvm_A 146 IPAEKLAEQGKLMESYGATCIYMADSGGAMS----MNDIRDRMRAFKAVLKPETQVGMHAHHNLSLGVANSIVAVEEGCD 221 (345)
T ss_dssp SCHHHHHHHHHHHHHHTCSEEEEECTTCCCC----HHHHHHHHHHHHHHSCTTSEEEEECBCTTSCHHHHHHHHHHTTCC
T ss_pred CCHHHHHHHHHHHHHCCCCEEEECCCcCccC----HHHHHHHHHHHHHhcCCCceEEEEECCCccHHHHHHHHHHHcCCC
Confidence 3567888999999999999999976544222 4789999999999875 6666542 33322233445556789999
Q ss_pred eeecchhchHHHHhhhcCCCCCHHHHHHHHHHHHHhCCCCeEEEeeeeeCCCCHHHHHHHHHHHHh
Q 018731 209 VFAHNIETVKRLQRIVRDPRAGYEQSLEVLKHAKLSKKGLITKSSIMLGLGESDDDLKEAMADLRS 274 (351)
Q Consensus 209 ~i~~~ies~~~~~~~~r~~~~~~~~~l~~i~~~~~~~~Gi~v~~~~IvGlgEt~e~~~~~l~~l~~ 274 (351)
.|-..+-.+-+ . . .....++.+..++. .|+. . |-+.+.+.++.+++.+
T Consensus 222 ~vd~tv~GlG~---~-a-GN~~le~lv~~L~~-----~g~~------~--~idl~~l~~~~~~~~~ 269 (345)
T 1nvm_A 222 RVDASLAGMGA---G-A-GNAPLEVFIAVAER-----LGWN------H--GTDLYTLMDAADDIVR 269 (345)
T ss_dssp EEEEBGGGCSS---T-T-CBCBHHHHHHHHHH-----HTCB------C--CSCHHHHHHHHHHTTG
T ss_pred EEEecchhccC---C-c-cCcCHHHHHHHHHh-----cCCC------C--CCCHHHHHHHHHHHHH
Confidence 98655444222 1 1 12467777776653 3443 1 3456677777766644
No 117
>2b7n_A Probable nicotinate-nucleotide pyrophosphorylase; quinolinate phosphoribosyltransferase, quinolinic acid, HELI pylori, transferase; HET: NTM; 2.30A {Helicobacter pylori} PDB: 2b7p_A* 2b7q_A*
Probab=81.55 E-value=3.2 Score=37.12 Aligned_cols=65 Identities=17% Similarity=0.233 Sum_probs=48.3
Q ss_pred HHHHHHHhCCCcEEEEeccCCCCCCCCcHHHHHHHHHHHHHhCCCcEEEEeecCCCCCHHHHHHHHHcCCCeeecc
Q 018731 138 NTAKAIASWGVDYIVLTSVDRDDIPDGGSGHFARTVKAMKKQKPDIMVECLTSDFRGDLRAVETLVHSGLDVFAHN 213 (351)
Q Consensus 138 ~~~~~~~~~G~~~I~ltgg~~~~l~~~~~~~~~~li~~ik~~~p~i~i~~~~~~~~~~~e~l~~L~~aG~~~i~~~ 213 (351)
+++++..+.|++.|.+... . .+.+.++++.++..+|++.+.+ .++. +++.+..+.++|+|.|.++
T Consensus 193 ee~~~A~~aGaD~I~ld~~-----~---~~~l~~~v~~l~~~~~~~~i~A--sGGI-~~~ni~~~~~aGaD~i~vG 257 (273)
T 2b7n_A 193 EEAKNAMNAGADIVMCDNL-----S---VLETKEIAAYRDAHYPFVLLEA--SGNI-SLESINAYAKSGVDAISVG 257 (273)
T ss_dssp HHHHHHHHHTCSEEEEETC-----C---HHHHHHHHHHHHHHCTTCEEEE--ESSC-CTTTHHHHHTTTCSEEECT
T ss_pred HHHHHHHHcCCCEEEECCC-----C---HHHHHHHHHHhhccCCCcEEEE--ECCC-CHHHHHHHHHcCCcEEEEc
Confidence 3444445678998887432 2 4778888888887778888876 3443 8899999999999999876
No 118
>3gk0_A PNP synthase, pyridoxine 5'-phosphate synthase; decode, ssgcid, niaid, SBRI, cytoplasm, pyridoxine biosynthesis, transferase; HET: DXP; 2.28A {Burkholderia pseudomallei}
Probab=81.27 E-value=4.8 Score=35.75 Aligned_cols=132 Identities=14% Similarity=0.147 Sum_probs=80.4
Q ss_pred hhHHHHHHHHHhCCCcEEEEeccC--------CCCCCCCcHHHHHHHHHHHHHhCCCcEEEEeecCCCCCHHHHHHHHHc
Q 018731 134 MEPENTAKAIASWGVDYIVLTSVD--------RDDIPDGGSGHFARTVKAMKKQKPDIMVECLTSDFRGDLRAVETLVHS 205 (351)
Q Consensus 134 eei~~~~~~~~~~G~~~I~ltgg~--------~~~l~~~~~~~~~~li~~ik~~~p~i~i~~~~~~~~~~~e~l~~L~~a 205 (351)
+|+++++..+ ....++|.--. +-++. +..+.+.++++.+++. ++.+.++.. -+++.++.-++.
T Consensus 105 ~emi~ial~~---kP~~vtLVPEkreE~TTegGlDv~-~~~~~L~~~i~~L~~~--GIrVSLFID---pd~~qI~aA~~~ 175 (278)
T 3gk0_A 105 PEMLDIACEI---RPHDACLVPEKRSELTTEGGLDVV-GHFDAVRAACKQLADA--GVRVSLFID---PDEAQIRAAHET 175 (278)
T ss_dssp HHHHHHHHHH---CCSEEEECCCSGGGBCSSSSBCTT-TTHHHHHHHHHHHHHT--TCEEEEEEC---SCHHHHHHHHHH
T ss_pred HHHHHHHHHc---CCCEEEECCCCCCCcCCCcchhhh-ccHHHHHHHHHHHHHC--CCEEEEEeC---CCHHHHHHHHHh
Confidence 4555555443 46677773211 11121 2467899999999987 788877653 178999999999
Q ss_pred CCCeeecchhchHHHH-hhhcCCCCCHHHHHHHHHHHHHhCCCCeEEEeeeeeCCCCHHHHHHHHHHHHhC-CCCEEeee
Q 018731 206 GLDVFAHNIETVKRLQ-RIVRDPRAGYEQSLEVLKHAKLSKKGLITKSSIMLGLGESDDDLKEAMADLRSI-DVDILTLG 283 (351)
Q Consensus 206 G~~~i~~~ies~~~~~-~~~r~~~~~~~~~l~~i~~~~~~~~Gi~v~~~~IvGlgEt~e~~~~~l~~l~~l-g~d~i~i~ 283 (351)
|.++|-+.-..+-..+ ...+ ...++.+.++.+.+++ .|+.|++ |.|-|.+.+... ..+ ++..++++
T Consensus 176 GAd~IELhTG~YA~a~~~~~~--~~el~rl~~aA~~A~~--lGL~VnA----GHGL~y~Nv~~i----a~ip~i~ElnIG 243 (278)
T 3gk0_A 176 GAPVIELHTGRYADAHDAAEQ--QREFERIATGVDAGIA--LGLKVNA----GHGLHYTNVQAI----AALPGIAELNIG 243 (278)
T ss_dssp TCSEEEECCHHHHTCSSHHHH--HHHHHHHHHHHHHHHH--TTCEEEE----CTTCCTTTHHHH----HTCTTEEEEEEC
T ss_pred CcCEEEEecchhhccCCchhH--HHHHHHHHHHHHHHHH--cCCEEec----CCCCCHHHHHHH----HhCCCCeEEecC
Confidence 9999976433322111 0001 2256677788888888 9998775 455555554322 223 35567776
Q ss_pred ccc
Q 018731 284 QYL 286 (351)
Q Consensus 284 ~~l 286 (351)
..+
T Consensus 244 Hai 246 (278)
T 3gk0_A 244 HAI 246 (278)
T ss_dssp HHH
T ss_pred HHH
Confidence 554
No 119
>1ydn_A Hydroxymethylglutaryl-COA lyase; TIM-barrel protein, structural genomics, PSI, protein struct initiative; 2.30A {Brucella melitensis}
Probab=81.19 E-value=5.8 Score=35.66 Aligned_cols=125 Identities=16% Similarity=0.119 Sum_probs=77.3
Q ss_pred CCchhHHHHHHHHHhCCCcEEEEeccCCCCCCCCcHHHHHHHHHHHHHhCCCc--EEEEeecCCCCCHHHHHHHHHcCCC
Q 018731 131 PDPMEPENTAKAIASWGVDYIVLTSVDRDDIPDGGSGHFARTVKAMKKQKPDI--MVECLTSDFRGDLRAVETLVHSGLD 208 (351)
Q Consensus 131 ~~~eei~~~~~~~~~~G~~~I~ltgg~~~~l~~~~~~~~~~li~~ik~~~p~i--~i~~~~~~~~~~~e~l~~L~~aG~~ 208 (351)
.+++++.+.++.+.+.|++.|.|..-..- + ....+.++++.+++..|++ .+++ .++.-+.......-.++|++
T Consensus 152 ~~~~~~~~~~~~~~~~G~d~i~l~Dt~G~-~---~P~~~~~lv~~l~~~~~~~~l~~H~-Hn~~Gla~an~l~Ai~aG~~ 226 (295)
T 1ydn_A 152 VTPQAVASVTEQLFSLGCHEVSLGDTIGR-G---TPDTVAAMLDAVLAIAPAHSLAGHY-HDTGGRALDNIRVSLEKGLR 226 (295)
T ss_dssp CCHHHHHHHHHHHHHHTCSEEEEEETTSC-C---CHHHHHHHHHHHHTTSCGGGEEEEE-BCTTSCHHHHHHHHHHHTCC
T ss_pred CCHHHHHHHHHHHHhcCCCEEEecCCCCC-c---CHHHHHHHHHHHHHhCCCCeEEEEE-CCCcchHHHHHHHHHHhCCC
Confidence 45788999999999999999988532221 1 1478899999999987654 4444 23322334455556789999
Q ss_pred eeecchhchHH--HHhhhcCCCCCHHHHHHHHHHHHHhCCCCeEEEeeeeeCCCCHHHHHHHHHHHHh
Q 018731 209 VFAHNIETVKR--LQRIVRDPRAGYEQSLEVLKHAKLSKKGLITKSSIMLGLGESDDDLKEAMADLRS 274 (351)
Q Consensus 209 ~i~~~ies~~~--~~~~~r~~~~~~~~~l~~i~~~~~~~~Gi~v~~~~IvGlgEt~e~~~~~l~~l~~ 274 (351)
.|..++-.+-+ +... +-.....++.+..++ . .|+.+ |-+.+.+.++.+++.+
T Consensus 227 ~vd~sv~GlG~cp~a~g-~~GN~~~e~lv~~l~---~--~g~~~--------~id~~~l~~~~~~~~~ 280 (295)
T 1ydn_A 227 VFDASVGGLGGCPFAPG-AKGNVDTVAVVEMLH---E--MGFET--------GLDLDRLRSAGLFTQA 280 (295)
T ss_dssp EEEEBTTCCSCBTTBTT-SCCBCBHHHHHHHHH---H--TTCBC--------CCCHHHHHHHHHHHHH
T ss_pred EEEeccccCCCCCCCCC-CcCChhHHHHHHHHH---h--cCCCC--------CcCHHHHHHHHHHHHH
Confidence 99876544311 1111 101235677776654 3 56542 3356667777666655
No 120
>3ovp_A Ribulose-phosphate 3-epimerase; iron binding, isomerase; HET: XPE; 1.70A {Homo sapiens} SCOP: c.1.2.0 PDB: 3ovq_A* 3ovr_A* 3qc3_A
Probab=81.07 E-value=4.4 Score=35.18 Aligned_cols=98 Identities=17% Similarity=0.233 Sum_probs=59.5
Q ss_pred CCchhHHHHHHHHHhCCCcEEEE--eccC-CCCCCCCcHHHHHHHHHHHHHhC-CCc--EEEEeecCCCCCHHHHHHHHH
Q 018731 131 PDPMEPENTAKAIASWGVDYIVL--TSVD-RDDIPDGGSGHFARTVKAMKKQK-PDI--MVECLTSDFRGDLRAVETLVH 204 (351)
Q Consensus 131 ~~~eei~~~~~~~~~~G~~~I~l--tgg~-~~~l~~~~~~~~~~li~~ik~~~-p~i--~i~~~~~~~~~~~e~l~~L~~ 204 (351)
.+...+.+.++.+.+.|++.+.+ ..|. .+.+. .+ .++++.+++.+ +++ .++..+.+ ....++.+.+
T Consensus 14 ~D~~~l~~~i~~l~~~g~d~~h~DVmDg~Fvpn~~-~G----~~~v~~ir~~~~~~~~~dvhLmv~~---p~~~i~~~~~ 85 (228)
T 3ovp_A 14 SDLANLGAECLRMLDSGADYLHLDVMDGHFVPNIT-FG----HPVVESLRKQLGQDPFFDMHMMVSK---PEQWVKPMAV 85 (228)
T ss_dssp SCGGGHHHHHHHHHHTTCSCEEEEEEBSSSSSCBC-BC----HHHHHHHHHHHCSSSCEEEEEECSC---GGGGHHHHHH
T ss_pred CCchhHHHHHHHHHHcCCCEEEEEecCCCcCcccc-cC----HHHHHHHHHhhCCCCcEEEEEEeCC---HHHHHHHHHH
Confidence 45566778888888889886655 3232 12232 12 34666777663 443 34444332 2357889999
Q ss_pred cCCCeeecchhchHHHHhhhcCCCCCHHHHHHHHHHHHHhCCCCeEEE
Q 018731 205 SGLDVFAHNIETVKRLQRIVRDPRAGYEQSLEVLKHAKLSKKGLITKS 252 (351)
Q Consensus 205 aG~~~i~~~ies~~~~~~~~r~~~~~~~~~l~~i~~~~~~~~Gi~v~~ 252 (351)
+|.|.|++..|+.+ +. .+.++.+++ .|+++..
T Consensus 86 aGad~itvH~Ea~~-----------~~---~~~i~~i~~--~G~k~gv 117 (228)
T 3ovp_A 86 AGANQYTFHLEATE-----------NP---GALIKDIRE--NGMKVGL 117 (228)
T ss_dssp HTCSEEEEEGGGCS-----------CH---HHHHHHHHH--TTCEEEE
T ss_pred cCCCEEEEccCCch-----------hH---HHHHHHHHH--cCCCEEE
Confidence 99999998876632 22 345556677 8886433
No 121
>3hq1_A 2-isopropylmalate synthase; LEUA, mycobacterium tuberculosis inhibition, bromopyruvate, amino-acid biosynthesis; HET: FLC; 1.70A {Mycobacterium tuberculosis} PDB: 1sr9_A 3hpz_A 3hps_A* 3fig_A 3u6w_A 3hpx_A
Probab=80.54 E-value=20 Score=36.04 Aligned_cols=139 Identities=12% Similarity=0.058 Sum_probs=80.6
Q ss_pred CCCchhHHHHHHHHHhCCCcEEEEeccCCCCCCCCcHHHHHHHHHHHHHhC---CCcEEEEeecCCCC-CHHHHHHHHHc
Q 018731 130 PPDPMEPENTAKAIASWGVDYIVLTSVDRDDIPDGGSGHFARTVKAMKKQK---PDIMVECLTSDFRG-DLRAVETLVHS 205 (351)
Q Consensus 130 ~~~~eei~~~~~~~~~~G~~~I~ltgg~~~~l~~~~~~~~~~li~~ik~~~---p~i~i~~~~~~~~~-~~e~l~~L~~a 205 (351)
.++.++-+++++.+.+.|+++|=.+. |. .. ... .+.++.|.+.. ++..+.++++.... -+..++.++.+
T Consensus 89 ~~s~eeKl~Ia~~L~~lGVd~IEaGf--P~-as---p~D-~e~v~~i~~~~l~~~~~~i~aL~r~~~~did~a~eal~~a 161 (644)
T 3hq1_A 89 PMSPARKRRMFDLLVRMGYKEIEVGF--PS-AS---QTD-FDFVREIIEQGAIPDDVTIQVLTQCRPELIERTFQACSGA 161 (644)
T ss_dssp CCCHHHHHHHHHHHHHHTCSEEEEEC--TT-TC---HHH-HHHHHHHHHTTCSCTTCEEEEEEESCHHHHHHHHHHHTTC
T ss_pred CCCHHHHHHHHHHHHHcCCCEEEEeC--CC-CC---hhH-HHHHHHHHhcCCCCCCeEEEEEecCCHhhHHHHHHHHhcC
Confidence 46788999999999999999987743 32 22 123 34556665542 36778777653210 12345567778
Q ss_pred CCCeeecchhchHHHH-hhhcCCCCCHHHHHHHH----HHHHHhCCC-CeEEEeeeeeC----CCCHHHHHHHHHHHHhC
Q 018731 206 GLDVFAHNIETVKRLQ-RIVRDPRAGYEQSLEVL----KHAKLSKKG-LITKSSIMLGL----GESDDDLKEAMADLRSI 275 (351)
Q Consensus 206 G~~~i~~~ies~~~~~-~~~r~~~~~~~~~l~~i----~~~~~~~~G-i~v~~~~IvGl----gEt~e~~~~~l~~l~~l 275 (351)
|.++|.+.+-+.+-.. ..+ +.+.++.++.+ +.+++...+ +.+..++.++- .-..+-+.+.++.+.++
T Consensus 162 ~~~~Vhif~stSd~h~~~~l---~~s~eevle~~~~~v~~a~~~~~~~~~~~~~v~fs~Edasrtd~dfl~ev~~aa~ea 238 (644)
T 3hq1_A 162 PRAIVHFYNSTSILQRRVVF---RANRAEVQAIATDGARKCVEQAAKYPGTQWRFEYSPESYTGTELEYAKQVCDAVGEV 238 (644)
T ss_dssp SEEEEEEEEECCHHHHHHTT---CCCHHHHHHHHHHHHHHHHHHHHHSCSSEEEEEEEEETGGGSCHHHHHHHHHHHHHH
T ss_pred CCCEEEEEecCCHHHHHHHh---CCCHHHHHHHHHHHHHHHHHHhhhccCceEEEEEcCcccCCCCHHHHHHHHHHHHHh
Confidence 8888887666655432 223 35777766644 334441111 11122233332 12566677888888875
Q ss_pred ---CCC
Q 018731 276 ---DVD 278 (351)
Q Consensus 276 ---g~d 278 (351)
|++
T Consensus 239 G~~Gad 244 (644)
T 3hq1_A 239 IAPTPE 244 (644)
T ss_dssp HCCCSS
T ss_pred cCCCCC
Confidence 566
No 122
>1pii_A N-(5'phosphoribosyl)anthranilate isomerase; bifunctional(isomerase and synthase); 2.00A {Escherichia coli} SCOP: c.1.2.4 c.1.2.4 PDB: 1jcm_P* 2kzh_A
Probab=80.51 E-value=17 Score=34.93 Aligned_cols=62 Identities=11% Similarity=0.132 Sum_probs=43.4
Q ss_pred HHHHHhCCCcEEEEeccCCCCCCCCcHHHHHHHHHHHHHhCCCcEEEEeecCCCCCHHHHHHHHHcCCCeeecc
Q 018731 140 AKAIASWGVDYIVLTSVDRDDIPDGGSGHFARTVKAMKKQKPDIMVECLTSDFRGDLRAVETLVHSGLDVFAHN 213 (351)
Q Consensus 140 ~~~~~~~G~~~I~ltgg~~~~l~~~~~~~~~~li~~ik~~~p~i~i~~~~~~~~~~~e~l~~L~~aG~~~i~~~ 213 (351)
+.++...|.+-|.|... .+. .+.+.++++..++..-+.-+++ -+.+.++...++|.+.|.+|
T Consensus 123 i~ea~~~GAD~ILLi~a---~l~---~~~l~~l~~~a~~lgm~~LvEv------h~~eE~~~A~~lga~iIGin 184 (452)
T 1pii_A 123 IYLARYYQADACLLMLS---VLD---DDQYRQLAAVAHSLEMGVLTEV------SNEEEQERAIALGAKVVGIN 184 (452)
T ss_dssp HHHHHHTTCSEEEEETT---TCC---HHHHHHHHHHHHHTTCEEEEEE------CSHHHHHHHHHTTCSEEEEE
T ss_pred HHHHHHcCCCEEEEEcc---cCC---HHHHHHHHHHHHHcCCeEEEEe------CCHHHHHHHHHCCCCEEEEe
Confidence 33467789999988543 244 3688899998888622223443 27788899999999988764
No 123
>1tqx_A D-ribulose-5-phosphate 3-epimerase, putative; structural genomics, protein structure initiative, PSI; 2.00A {Plasmodium falciparum} SCOP: c.1.2.2
Probab=80.50 E-value=12 Score=32.47 Aligned_cols=88 Identities=7% Similarity=0.154 Sum_probs=54.5
Q ss_pred HHHHHhCC-CcEEEEeccCCCCCCCCc-HHHHHHHHHHHHHhCCCcEEEEeecCCCCCHHHHHHHHHcCCCeeecchhch
Q 018731 140 AKAIASWG-VDYIVLTSVDRDDIPDGG-SGHFARTVKAMKKQKPDIMVECLTSDFRGDLRAVETLVHSGLDVFAHNIETV 217 (351)
Q Consensus 140 ~~~~~~~G-~~~I~ltgg~~~~l~~~~-~~~~~~li~~ik~~~p~i~i~~~~~~~~~~~e~l~~L~~aG~~~i~~~ies~ 217 (351)
++.+...| ++.|.+.+.+|. +.... .+...+-++.+++..+++.|++ .++ .+.+.+..++++|.|.+-.|
T Consensus 130 ~~~~l~~g~~D~VlvmsV~pG-f~gq~f~~~~l~ki~~lr~~~~~~~I~V--dGG-I~~~ti~~~~~aGAd~~V~G---- 201 (227)
T 1tqx_A 130 LVPILDTNLINTVLVMTVEPG-FGGQSFMHDMMGKVSFLRKKYKNLNIQV--DGG-LNIETTEISASHGANIIVAG---- 201 (227)
T ss_dssp GHHHHTTTCCSEEEEESSCTT-CSSCCCCGGGHHHHHHHHHHCTTCEEEE--ESS-CCHHHHHHHHHHTCCEEEES----
T ss_pred HHHHhhcCCcCEEEEeeeccC-CCCcccchHHHHHHHHHHHhccCCeEEE--ECC-CCHHHHHHHHHcCCCEEEEe----
Confidence 44445555 889988777753 22111 1344566677777655666654 445 48999999999999998765
Q ss_pred HHHHhhhcCCCCCHHHHHHHHHH
Q 018731 218 KRLQRIVRDPRAGYEQSLEVLKH 240 (351)
Q Consensus 218 ~~~~~~~r~~~~~~~~~l~~i~~ 240 (351)
+..++ ..++.+.++.++.
T Consensus 202 saIf~-----~~d~~~~i~~l~~ 219 (227)
T 1tqx_A 202 TSIFN-----AEDPKYVIDTMRV 219 (227)
T ss_dssp HHHHT-----CSSHHHHHHHHHH
T ss_pred HHHhC-----CCCHHHHHHHHHH
Confidence 22221 2356666665554
No 124
>2jbm_A Nicotinate-nucleotide pyrophosphorylase; NAD, enzyme, metabolism, transferase, polymorphism, glycosyltransferase, pyridine nucleotide biosynthesis; HET: SRT; 2.0A {Homo sapiens} PDB: 3lar_A
Probab=80.42 E-value=3.2 Score=37.72 Aligned_cols=65 Identities=23% Similarity=0.295 Sum_probs=48.6
Q ss_pred HHHHHHHhCCCcEEEEeccCCCCCCCCcHHHHHHHHHHHHHhCCCcEEEEeecCCCCCHHHHHHHHHcCCCeeecc
Q 018731 138 NTAKAIASWGVDYIVLTSVDRDDIPDGGSGHFARTVKAMKKQKPDIMVECLTSDFRGDLRAVETLVHSGLDVFAHN 213 (351)
Q Consensus 138 ~~~~~~~~~G~~~I~ltgg~~~~l~~~~~~~~~~li~~ik~~~p~i~i~~~~~~~~~~~e~l~~L~~aG~~~i~~~ 213 (351)
+++.+..+.|+..|.+... . .+.+.++++.++..+|++.|.+ .+++ +++.+..+.++|+|.|.++
T Consensus 208 ee~~~A~~aGaD~I~ld~~-----~---~~~l~~~v~~l~~~~~~~~I~A--SGGI-t~~ni~~~~~aGaD~i~vG 272 (299)
T 2jbm_A 208 QEAVQAAEAGADLVLLDNF-----K---PEELHPTATVLKAQFPSVAVEA--SGGI-TLDNLPQFCGPHIDVISMG 272 (299)
T ss_dssp HHHHHHHHTTCSEEEEESC-----C---HHHHHHHHHHHHHHCTTSEEEE--ESSC-CTTTHHHHCCTTCCEEECT
T ss_pred HHHHHHHHcCCCEEEECCC-----C---HHHHHHHHHHhhccCCCeeEEE--ECCC-CHHHHHHHHHCCCCEEEEC
Confidence 3444455678998887432 1 4788888888887778888876 3454 8899999999999999875
No 125
>4fo4_A Inosine 5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.03A {Vibrio cholerae o1 biovar el tor} PDB: 4ff0_A* 4hlv_A* 4fez_A
Probab=80.42 E-value=37 Score=31.53 Aligned_cols=131 Identities=15% Similarity=0.211 Sum_probs=77.0
Q ss_pred HHHHHHHHhCCCcEEEEeccCCCCCCCCcHHHHHHHHHHHHHhCCCcEEEEeecCCCCCHHHHHHHHHcCCCeeecchhc
Q 018731 137 ENTAKAIASWGVDYIVLTSVDRDDIPDGGSGHFARTVKAMKKQKPDIMVECLTSDFRGDLRAVETLVHSGLDVFAHNIET 216 (351)
Q Consensus 137 ~~~~~~~~~~G~~~I~ltgg~~~~l~~~~~~~~~~li~~ik~~~p~i~i~~~~~~~~~~~e~l~~L~~aG~~~i~~~ies 216 (351)
.+.++.+.+.|++.|+|..... .+ +.+.+.++.+++.+|++.+-+-+ ..+.+.++.+.++|+|.|.++.+.
T Consensus 110 ~~~~~~lieaGvd~I~idta~G--~~----~~~~~~I~~ik~~~p~v~Vi~G~---v~t~e~A~~a~~aGAD~I~vG~gp 180 (366)
T 4fo4_A 110 EERVKALVEAGVDVLLIDSSHG--HS----EGVLQRIRETRAAYPHLEIIGGN---VATAEGARALIEAGVSAVKVGIGP 180 (366)
T ss_dssp HHHHHHHHHTTCSEEEEECSCT--TS----HHHHHHHHHHHHHCTTCEEEEEE---ECSHHHHHHHHHHTCSEEEECSSC
T ss_pred HHHHHHHHhCCCCEEEEeCCCC--CC----HHHHHHHHHHHHhcCCCceEeee---eCCHHHHHHHHHcCCCEEEEecCC
Confidence 4456777888999998843221 12 57788999999988887653311 137889999999999999876443
Q ss_pred hHH-HHhhhcCCCC-CHHHHHHHHHHHHHhCCCCeEEEeeeeeCC-CCHHHHHHHHHHHHhCCCCEEeeeccc
Q 018731 217 VKR-LQRIVRDPRA-GYEQSLEVLKHAKLSKKGLITKSSIMLGLG-ESDDDLKEAMADLRSIDVDILTLGQYL 286 (351)
Q Consensus 217 ~~~-~~~~~r~~~~-~~~~~l~~i~~~~~~~~Gi~v~~~~IvGlg-Et~e~~~~~l~~l~~lg~d~i~i~~~l 286 (351)
... -.+...+.+. ...-..+..+.++. .++.+ |..=| .+.+++.+.+ .+|.+.+.++..+
T Consensus 181 Gs~~~tr~~~g~g~p~~~~l~~v~~~~~~--~~iPV----IA~GGI~~~~di~kal----a~GAd~V~vGs~f 243 (366)
T 4fo4_A 181 GSICTTRIVTGVGVPQITAIADAAGVANE--YGIPV----IADGGIRFSGDISKAI----AAGASCVMVGSMF 243 (366)
T ss_dssp STTBCHHHHHCCCCCHHHHHHHHHHHHGG--GTCCE----EEESCCCSHHHHHHHH----HTTCSEEEESTTT
T ss_pred CCCCCcccccCcccchHHHHHHHHHHHhh--cCCeE----EEeCCCCCHHHHHHHH----HcCCCEEEEChHh
Confidence 211 0111111122 23233333333334 56653 22113 3566665554 4799998887544
No 126
>3chv_A Prokaryotic domain of unknown function (DUF849) W barrel fold; TIM barrel fold, structural genomics, joint center for struc genomics; HET: MSE; 1.45A {Silicibacter pomeroyi dss-3} PDB: 3fa5_A
Probab=80.35 E-value=7.3 Score=35.03 Aligned_cols=85 Identities=16% Similarity=0.198 Sum_probs=54.3
Q ss_pred CCCCchhHHHHHHHHHhCCCcEEEEeccCCCCCCCCcHHHHHHHHHHHHHhCCCcEEEEeecCCCC-CHHHHHHHHHcCC
Q 018731 129 APPDPMEPENTAKAIASWGVDYIVLTSVDRDDIPDGGSGHFARTVKAMKKQKPDIMVECLTSDFRG-DLRAVETLVHSGL 207 (351)
Q Consensus 129 ~~~~~eei~~~~~~~~~~G~~~I~ltgg~~~~l~~~~~~~~~~li~~ik~~~p~i~i~~~~~~~~~-~~e~l~~L~~aG~ 207 (351)
.+.+++|+.+.+.+..+.|..-+.+=-=+++--+..+.+.|.++++.|++..|++-|...|.+... .++.+.-+ +...
T Consensus 29 lPvTpeEia~~A~~~~~AGAaivHlH~Rd~~G~ps~d~~~~~e~~~~IR~~~pd~ii~~TTgg~~~~~eeR~~~~-~~~P 107 (284)
T 3chv_A 29 VPITVSEQVESTQEAFEAGAAIAHCHVRNDDGTPSSDPDRFARLTEGLHTHCPGMIVQFSTGGRSGAGQARGGML-PLKP 107 (284)
T ss_dssp CCCSHHHHHHHHHHHHHHTCCEEEECEECTTSCEECCHHHHHHHHHHHHHHSTTCEEEECCCTTTCCGGGGGTTG-GGCC
T ss_pred CCCCHHHHHHHHHHHHHcCCcEEEeeecCCCCCcCCCHHHHHHHHHHHHHhCCCeEEEeCCCCCCCCHHHHHHhh-hcCC
Confidence 446889999999999999988766621111101112368999999999998888877664422211 23444444 5667
Q ss_pred Ceeecch
Q 018731 208 DVFAHNI 214 (351)
Q Consensus 208 ~~i~~~i 214 (351)
+..+++.
T Consensus 108 e~aSl~~ 114 (284)
T 3chv_A 108 DMASLSV 114 (284)
T ss_dssp SEEEECC
T ss_pred CEEEecC
Confidence 7766554
No 127
>3qfe_A Putative dihydrodipicolinate synthase family PROT; seattle structural genomics center for infectious disease, S coccidioides, valley fever; 2.35A {Coccidioides immitis}
Probab=80.29 E-value=19 Score=32.76 Aligned_cols=76 Identities=17% Similarity=0.150 Sum_probs=37.8
Q ss_pred HHHHHHHHcCCCeeecchhchHHHHhhhcCCCCCHHHHHHHHHHHHHhCCCCeEEEeeeeeC-CCCHHHHHHHHHHHHhC
Q 018731 197 RAVETLVHSGLDVFAHNIETVKRLQRIVRDPRAGYEQSLEVLKHAKLSKKGLITKSSIMLGL-GESDDDLKEAMADLRSI 275 (351)
Q Consensus 197 e~l~~L~~aG~~~i~~~ies~~~~~~~~r~~~~~~~~~l~~i~~~~~~~~Gi~v~~~~IvGl-gEt~e~~~~~l~~l~~l 275 (351)
..++.+.+.|++.+.+.=-|.+- ..-+.+++.+.++.+.+...| ..-+|+|. +.+.++..+..+.+.+.
T Consensus 36 ~lv~~li~~Gv~gl~v~GtTGE~-------~~Ls~~Er~~v~~~~~~~~~g---rvpviaGvg~~~t~~ai~la~~a~~~ 105 (318)
T 3qfe_A 36 RYYAYLARSGLTGLVILGTNAEA-------FLLTREERAQLIATARKAVGP---DFPIMAGVGAHSTRQVLEHINDASVA 105 (318)
T ss_dssp HHHHHHHTTTCSEEEESSGGGTG-------GGSCHHHHHHHHHHHHHHHCT---TSCEEEECCCSSHHHHHHHHHHHHHH
T ss_pred HHHHHHHHcCCCEEEeCccccCh-------hhCCHHHHHHHHHHHHHHhCC---CCcEEEeCCCCCHHHHHHHHHHHHHc
Confidence 44555556666665543222111 022455555555555442222 12345566 34566666666666666
Q ss_pred CCCEEee
Q 018731 276 DVDILTL 282 (351)
Q Consensus 276 g~d~i~i 282 (351)
|+|.+.+
T Consensus 106 Gadavlv 112 (318)
T 3qfe_A 106 GANYVLV 112 (318)
T ss_dssp TCSEEEE
T ss_pred CCCEEEE
Confidence 6665444
No 128
>1rqb_A Transcarboxylase 5S subunit; TIM-barrel, carbamylated lysine, transfera; HET: KCX; 1.90A {Propionibacterium freudenreichii subspshermanii} SCOP: a.5.7.2 c.1.10.5 PDB: 1rqe_A 1rqh_A* 1rr2_A* 1u5j_A* 1s3h_A*
Probab=79.84 E-value=6.5 Score=38.73 Aligned_cols=78 Identities=15% Similarity=0.067 Sum_probs=52.8
Q ss_pred CchhHHHHHHHHHhCCCcEEEEeccCCCCCCCCcHHHHHHHHHHHHHhCC-CcEEEEe-ecCCCCCHHHHHHHHHcCCCe
Q 018731 132 DPMEPENTAKAIASWGVDYIVLTSVDRDDIPDGGSGHFARTVKAMKKQKP-DIMVECL-TSDFRGDLRAVETLVHSGLDV 209 (351)
Q Consensus 132 ~~eei~~~~~~~~~~G~~~I~ltgg~~~~l~~~~~~~~~~li~~ik~~~p-~i~i~~~-~~~~~~~~e~l~~L~~aG~~~ 209 (351)
+++.+.+.++++.+.|+..|.|-.-..-.. ...+.++++.+++..| ++.|.+- +++.-+--...-.-.++|++.
T Consensus 173 ~~e~~~~~a~~l~~~Gad~I~L~DT~G~~~----P~~v~~lv~~l~~~~p~~i~I~~H~Hnd~GlAvAN~laAveAGa~~ 248 (539)
T 1rqb_A 173 TVEGYVKLAGQLLDMGADSIALKDMAALLK----PQPAYDIIKAIKDTYGQKTQINLHCHSTTGVTEVSLMKAIEAGVDV 248 (539)
T ss_dssp CHHHHHHHHHHHHHTTCSEEEEEETTCCCC----HHHHHHHHHHHHHHHCTTCCEEEEEBCTTSCHHHHHHHHHHTTCSE
T ss_pred CHHHHHHHHHHHHHcCCCEEEeCCCCCCcC----HHHHHHHHHHHHHhcCCCceEEEEeCCCCChHHHHHHHHHHhCCCE
Confidence 578889999999999999999943322212 3788999999998876 5544432 333222334445556899999
Q ss_pred eecc
Q 018731 210 FAHN 213 (351)
Q Consensus 210 i~~~ 213 (351)
|-..
T Consensus 249 VD~t 252 (539)
T 1rqb_A 249 VDTA 252 (539)
T ss_dssp EEEB
T ss_pred EEEe
Confidence 8643
No 129
>3ffs_A Inosine-5-monophosphate dehydrogenase; beta-alpha barrel, TIM fold, oxidoreductase; 3.19A {Cryptosporidium parvum}
Probab=79.73 E-value=37 Score=31.99 Aligned_cols=130 Identities=24% Similarity=0.256 Sum_probs=74.1
Q ss_pred HHHHHHHHhCCCcEEEEeccCCCCCCCCcHHHHHHHHHHHHHhCCCcEEEEeecCCCCCHHHHHHHHHcCCCeeecchhc
Q 018731 137 ENTAKAIASWGVDYIVLTSVDRDDIPDGGSGHFARTVKAMKKQKPDIMVECLTSDFRGDLRAVETLVHSGLDVFAHNIET 216 (351)
Q Consensus 137 ~~~~~~~~~~G~~~I~ltgg~~~~l~~~~~~~~~~li~~ik~~~p~i~i~~~~~~~~~~~e~l~~L~~aG~~~i~~~ies 216 (351)
.+.++.+.+.|++.|+|..... .+ ..+.++++.+++.+ ++.+-+ .+ ..+.+.++.+.++|+|.|.++.+.
T Consensus 146 ~e~~~~lveaGvdvIvldta~G--~~----~~~~e~I~~ik~~~-~i~Vi~--g~-V~t~e~A~~a~~aGAD~I~vG~g~ 215 (400)
T 3ffs_A 146 IERAKLLVEAGVDVIVLDSAHG--HS----LNIIRTLKEIKSKM-NIDVIV--GN-VVTEEATKELIENGADGIKVGIGP 215 (400)
T ss_dssp CHHHHHHHHHTCSEEEECCSCC--SB----HHHHHHHHHHHTTC-CCEEEE--EE-ECSHHHHHHHHHTTCSEEEECC--
T ss_pred HHHHHHHHHcCCCEEEEeCCCC--Cc----ccHHHHHHHHHhcC-CCeEEE--ee-cCCHHHHHHHHHcCCCEEEEeCCC
Confidence 4567777888999998843332 12 57888999999875 555432 11 137899999999999999887653
Q ss_pred hHHH-HhhhcCCCC-CHHHHHHHHHHHHHhCCCCeEEEeeeeeCC-CCHHHHHHHHHHHHhCCCCEEeeeccc
Q 018731 217 VKRL-QRIVRDPRA-GYEQSLEVLKHAKLSKKGLITKSSIMLGLG-ESDDDLKEAMADLRSIDVDILTLGQYL 286 (351)
Q Consensus 217 ~~~~-~~~~r~~~~-~~~~~l~~i~~~~~~~~Gi~v~~~~IvGlg-Et~e~~~~~l~~l~~lg~d~i~i~~~l 286 (351)
...- .+...+.+. ++.-..+..+.+++ .++.+-++ | | .+.+++.+.+ .+|++.+.++..+
T Consensus 216 Gs~~~tr~~~g~g~p~~~al~~v~~~~~~--~~IPVIA~---G-GI~~~~di~kal----alGAd~V~vGt~f 278 (400)
T 3ffs_A 216 GSICTTRIVAGVGVPQITAIEKCSSVASK--FGIPIIAD---G-GIRYSGDIGKAL----AVGASSVMIGSIL 278 (400)
T ss_dssp -------CCSCBCCCHHHHHHHHHHHHTT--TTCCEEEE---S-CCCSHHHHHHHH----TTTCSEEEECGGG
T ss_pred CcCcccccccccchhHHHHHHHHHHHHHh--cCCCEEec---C-CCCCHHHHHHHH----HcCCCEEEEChHH
Confidence 3211 111111111 23222333333333 46653221 1 2 3567776654 4799998887554
No 130
>1o4u_A Type II quinolic acid phosphoribosyltransferase; structural genomics, joint center for structural genomics, J protein structure initiative; 2.50A {Thermotoga maritima} SCOP: c.1.17.1 d.41.2.1
Probab=79.42 E-value=1.9 Score=38.88 Aligned_cols=67 Identities=18% Similarity=0.223 Sum_probs=50.0
Q ss_pred HHHHHHHHhCCCcEEEEeccCCCCCCCCcHHHHHHHHHHHHHhCCCcEEEEeecCCCCCHHHHHHHHHcCCCeeecch
Q 018731 137 ENTAKAIASWGVDYIVLTSVDRDDIPDGGSGHFARTVKAMKKQKPDIMVECLTSDFRGDLRAVETLVHSGLDVFAHNI 214 (351)
Q Consensus 137 ~~~~~~~~~~G~~~I~ltgg~~~~l~~~~~~~~~~li~~ik~~~p~i~i~~~~~~~~~~~e~l~~L~~aG~~~i~~~i 214 (351)
.++++++.+.|++.|.+- .+. .+.+.+.++.++..+|.+.+++ .++ ++.+.+..+++.|+|.|+++-
T Consensus 203 leea~eA~~aGaD~I~LD-----n~~---~e~l~~av~~l~~~~~~v~ieA--SGG-It~eni~~~a~tGVD~IsvGs 269 (285)
T 1o4u_A 203 LEDALRAVEAGADIVMLD-----NLS---PEEVKDISRRIKDINPNVIVEV--SGG-ITEENVSLYDFETVDVISSSR 269 (285)
T ss_dssp HHHHHHHHHTTCSEEEEE-----SCC---HHHHHHHHHHHHHHCTTSEEEE--EEC-CCTTTGGGGCCTTCCEEEEGG
T ss_pred HHHHHHHHHcCCCEEEEC-----CCC---HHHHHHHHHHhhccCCCceEEE--ECC-CCHHHHHHHHHcCCCEEEEeH
Confidence 356666677899988872 233 4788888888887666777776 334 388899999999999998763
No 131
>3eeg_A 2-isopropylmalate synthase; 11106D, beta barrel, PSI-II, structural genomics, protein structure initiative; 2.78A {Cytophaga hutchinsonii atcc 33406}
Probab=79.25 E-value=7.3 Score=35.73 Aligned_cols=126 Identities=11% Similarity=0.124 Sum_probs=75.7
Q ss_pred CCchhHHHHHHHHHhCCCcEEEEeccCCCCCCCCcHHHHHHHHHHHHHhCCC---cEEEEe-ecCCCCCHHHHHHHHHcC
Q 018731 131 PDPMEPENTAKAIASWGVDYIVLTSVDRDDIPDGGSGHFARTVKAMKKQKPD---IMVECL-TSDFRGDLRAVETLVHSG 206 (351)
Q Consensus 131 ~~~eei~~~~~~~~~~G~~~I~ltgg~~~~l~~~~~~~~~~li~~ik~~~p~---i~i~~~-~~~~~~~~e~l~~L~~aG 206 (351)
.+++.+.+.++.+.+.|+..|.|..-..-.. ...+.++++.+++..|+ +.+.+- .++.-+--...-.-.++|
T Consensus 148 ~~~~~~~~~~~~~~~~G~~~i~l~DT~G~~~----P~~v~~lv~~l~~~~~~~~~~~i~~H~Hnd~GlA~AN~laA~~aG 223 (325)
T 3eeg_A 148 ADQAFLARMVEAVIEAGADVVNIPDTTGYML----PWQYGERIKYLMDNVSNIDKAILSAHCHNDLGLATANSLAALQNG 223 (325)
T ss_dssp SCHHHHHHHHHHHHHHTCSEEECCBSSSCCC----HHHHHHHHHHHHHHCSCGGGSEEEECBCCTTSCHHHHHHHHHHHT
T ss_pred chHHHHHHHHHHHHhcCCCEEEecCccCCcC----HHHHHHHHHHHHHhCCCCCceEEEEEeCCCCCHHHHHHHHHHHhC
Confidence 4567788899999999999999843332212 37899999999998875 666542 233222233344455789
Q ss_pred CCeeecchhchHHHHhhhcCCCCCHHHHHHHHHHHHHhCCCCeEEEeeeeeCCCCHHHHHHHHHHHHh
Q 018731 207 LDVFAHNIETVKRLQRIVRDPRAGYEQSLEVLKHAKLSKKGLITKSSIMLGLGESDDDLKEAMADLRS 274 (351)
Q Consensus 207 ~~~i~~~ies~~~~~~~~r~~~~~~~~~l~~i~~~~~~~~Gi~v~~~~IvGlgEt~e~~~~~l~~l~~ 274 (351)
++.|...+-.+-. .. .....++.+-.++..... .|+. . |-+.+.+.++.+++.+
T Consensus 224 a~~vd~tv~GlGe---r~--GN~~lE~vv~~L~~~~~~-~g~~------t--gidl~~L~~~s~~v~~ 277 (325)
T 3eeg_A 224 ARQVECTINGIGE---RA--GNTALEEVVMAMECHKET-LGLE------T--GINHKKLVPISHLVST 277 (325)
T ss_dssp CCEEEEBGGGCCS---TT--CCCBHHHHHHHHHHTHHH-HCEE------C--CCCGGGHHHHHHHHHH
T ss_pred CCEEEEecccccc---cc--cchhHHHHHHHHHhhhhc-cCCC------C--CcCHHHHHHHHHHHHH
Confidence 9998665544322 11 124677887777643210 2333 2 3344556666666654
No 132
>4gj1_A 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino) methylideneamino] imidazole-4-carboxamide...; HISA, csgid, niaid,; 2.15A {Campylobacter jejuni subsp}
Probab=78.98 E-value=2.1 Score=37.59 Aligned_cols=132 Identities=14% Similarity=0.149 Sum_probs=76.9
Q ss_pred chhHHHHHHHHHhCCCcEEEEeccCCCCCCCCcHHHHHHHHHHHHHhCCCcEEEEeecCCCCCHHHHHHHHHcCCCeeec
Q 018731 133 PMEPENTAKAIASWGVDYIVLTSVDRDDIPDGGSGHFARTVKAMKKQKPDIMVECLTSDFRGDLRAVETLVHSGLDVFAH 212 (351)
Q Consensus 133 ~eei~~~~~~~~~~G~~~I~ltgg~~~~l~~~~~~~~~~li~~ik~~~p~i~i~~~~~~~~~~~e~l~~L~~aG~~~i~~ 212 (351)
..++.+.++.+.+.|++++++..-+.. .. +.....++++.+.+.. .+.+.+ .++..+.+.++.+.++|++++.+
T Consensus 30 ~~dP~~~a~~~~~~gad~lhvvDld~a-~~--~~~~~~~~i~~i~~~~-~~pl~v--GGGIrs~e~~~~~l~~GadkVii 103 (243)
T 4gj1_A 30 KYNPLKKFKEYEKAGAKELHLVDLTGA-KD--PSKRQFALIEKLAKEV-SVNLQV--GGGIRSKEEVKALLDCGVKRVVI 103 (243)
T ss_dssp CCCHHHHHHHHHHHTCCEEEEEEHHHH-HC--GGGCCHHHHHHHHHHC-CSEEEE--ESSCCCHHHHHHHHHTTCSEEEE
T ss_pred CCCHHHHHHHHHHCCCCEEEEEecCcc-cc--cchhHHHHHHHHHHhc-CCCeEe--ccccccHHHHHHHHHcCCCEEEE
Confidence 346777888889999999988543211 00 1123356777777653 456654 55667899999999999999988
Q ss_pred chhchHHHHhhhcCCCCCHHHHHHHHHHHHHhCCCCeEEEeee------eeC-C---CCHHHHHHHHHHHHhCCCCEEee
Q 018731 213 NIETVKRLQRIVRDPRAGYEQSLEVLKHAKLSKKGLITKSSIM------LGL-G---ESDDDLKEAMADLRSIDVDILTL 282 (351)
Q Consensus 213 ~ies~~~~~~~~r~~~~~~~~~l~~i~~~~~~~~Gi~v~~~~I------vGl-g---Et~e~~~~~l~~l~~lg~d~i~i 282 (351)
+-.... +.+-..+..+..-. .-+.+..+.. +-. | .|.-+..+.++.+.+.|+..+-+
T Consensus 104 ~t~a~~-----------~p~li~e~~~~~g~--q~iv~~iD~~~~~~~~v~~~gw~~~~~~~~~~~~~~~~~~g~~eil~ 170 (243)
T 4gj1_A 104 GSMAIK-----------DATLCLEILKEFGS--EAIVLALDTILKEDYVVAVNAWQEASDKKLMEVLDFYSNKGLKHILC 170 (243)
T ss_dssp CTTTTT-----------CHHHHHHHHHHHCT--TTEEEEEEEEESSSEEEC--------CCBHHHHHHHHHTTTCCEEEE
T ss_pred cccccc-----------CCchHHHHHhcccC--ceEEEEEEEEeCCCCEEEecCceecccchHHHHHHHHhhcCCcEEEe
Confidence 744332 22222222222211 1233344432 211 1 23334567777788888887766
Q ss_pred e
Q 018731 283 G 283 (351)
Q Consensus 283 ~ 283 (351)
.
T Consensus 171 t 171 (243)
T 4gj1_A 171 T 171 (243)
T ss_dssp E
T ss_pred e
Confidence 3
No 133
>3lmz_A Putative sugar isomerase; structural genomics, joint center structural genomics, JCSG, protein structure initiative, PS isomerase; HET: MSE CIT PGE; 1.44A {Parabacteroides distasonis}
Probab=78.85 E-value=13 Score=32.06 Aligned_cols=76 Identities=9% Similarity=0.047 Sum_probs=41.3
Q ss_pred HHHHHHHHHcCCCeeecchhchHHHHhhhcCCCCCHHHHHHHHHHHHHhCCCCeEEEeeeeeCCCCHHHHHHHHHHHHhC
Q 018731 196 LRAVETLVHSGLDVFAHNIETVKRLQRIVRDPRAGYEQSLEVLKHAKLSKKGLITKSSIMLGLGESDDDLKEAMADLRSI 275 (351)
Q Consensus 196 ~e~l~~L~~aG~~~i~~~ies~~~~~~~~r~~~~~~~~~l~~i~~~~~~~~Gi~v~~~~IvGlgEt~e~~~~~l~~l~~l 275 (351)
++.++.++++|++.|-+....+ . ...+.++.-+..+.+.+ .|+.+.+.-.. ..++.+.+.+.++.+.++
T Consensus 33 ~~~l~~~~~~G~~~vEl~~~~~-------~-~~~~~~~~~~~~~~l~~--~gl~i~~~~~~-~~~~~~~~~~~i~~A~~l 101 (257)
T 3lmz_A 33 DTTLKTLERLDIHYLCIKDFHL-------P-LNSTDEQIRAFHDKCAA--HKVTGYAVGPI-YMKSEEEIDRAFDYAKRV 101 (257)
T ss_dssp HHHHHHHHHTTCCEEEECTTTS-------C-TTCCHHHHHHHHHHHHH--TTCEEEEEEEE-EECSHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCCEEEEecccC-------C-CCCCHHHHHHHHHHHHH--cCCeEEEEecc-ccCCHHHHHHHHHHHHHh
Confidence 5677777777777765543210 0 12233344444444555 67764432211 136667777777777777
Q ss_pred CCCEEee
Q 018731 276 DVDILTL 282 (351)
Q Consensus 276 g~d~i~i 282 (351)
|+..+.+
T Consensus 102 Ga~~v~~ 108 (257)
T 3lmz_A 102 GVKLIVG 108 (257)
T ss_dssp TCSEEEE
T ss_pred CCCEEEe
Confidence 7776665
No 134
>3n9r_A Fructose-bisphosphate aldolase; FBP aldolase, class II, inhibitor, lyase; HET: TD3; 1.80A {Helicobacter pylori} SCOP: c.1.10.0 PDB: 3c52_A* 3c56_A* 3c4u_A* 3n9s_A*
Probab=78.43 E-value=39 Score=30.61 Aligned_cols=171 Identities=17% Similarity=0.117 Sum_probs=92.8
Q ss_pred CchhHHHHHHHHHhCCCcEEEEec-cCCCCCCCCcHHHHHHHHHHHHHhCCCcEEEEeecCCCCCHHHHHHHHHcCCCee
Q 018731 132 DPMEPENTAKAIASWGVDYIVLTS-VDRDDIPDGGSGHFARTVKAMKKQKPDIMVECLTSDFRGDLRAVETLVHSGLDVF 210 (351)
Q Consensus 132 ~~eei~~~~~~~~~~G~~~I~ltg-g~~~~l~~~~~~~~~~li~~ik~~~p~i~i~~~~~~~~~~~e~l~~L~~aG~~~i 210 (351)
..+.+...++.+.+.+..-|.-.+ +... +. +.+.+..+++...+.+.++.|.+ .-|.-.+.+.+....++|++++
T Consensus 26 n~e~~~avi~AAee~~sPvIlq~s~g~~~-y~--g~~~~~~~v~~aa~~~~~VPVal-HLDHg~~~e~~~~ai~~GFtSV 101 (307)
T 3n9r_A 26 NFEMLNAIFEAGNEENSPLFIQASEGAIK-YM--GIDMAVGMVKIMCERYPHIPVAL-HLDHGTTFESCEKAVKAGFTSV 101 (307)
T ss_dssp SHHHHHHHHHHHHHHTCCEEEEEEHHHHH-HH--CHHHHHHHHHHHHHHSTTSCEEE-EEEEECSHHHHHHHHHHTCSEE
T ss_pred CHHHHHHHHHHHHHhCCCEEEEcChhhhh-hC--CHHHHHHHHHHHHHhcCCCcEEE-ECCCCCCHHHHHHHHHhCCCcE
Confidence 356667777777777777554332 2211 11 24566777777766544555533 2222236788888999999988
Q ss_pred ecch--hchHHHHhhhcCCCCCHHHHHHHHHHHHHhCCCCeEEEe--eeeeCCCC---------HHHHHHHHHHHHhCCC
Q 018731 211 AHNI--ETVKRLQRIVRDPRAGYEQSLEVLKHAKLSKKGLITKSS--IMLGLGES---------DDDLKEAMADLRSIDV 277 (351)
Q Consensus 211 ~~~i--es~~~~~~~~r~~~~~~~~~l~~i~~~~~~~~Gi~v~~~--~IvGlgEt---------~e~~~~~l~~l~~lg~ 277 (351)
-+.. ..+++ +.+...+.++.+++ .|+.|.+- .+-|..+. .-+-.+..+|+++.|+
T Consensus 102 MiDgS~~p~ee----------Ni~~Tk~vv~~ah~--~gvsVEaELG~igG~Ed~~~~~~~~~~yT~Peea~~Fv~~Tgv 169 (307)
T 3n9r_A 102 MIDASHHAFEE----------NLELTSKVVKMAHN--AGVSVEAELGRLMGIEDNISVDEKDAVLVNPKEAEQFVKESQV 169 (307)
T ss_dssp EECCTTSCHHH----------HHHHHHHHHHHHHH--TTCEEEEEESCCCCC----------CCSCCHHHHHHHHHHHCC
T ss_pred EEECCCCCHHH----------HHHHHHHHHHHHHH--cCCeEEEEeeeeccccCCcccccccccCCCHHHHHHHHHHHCC
Confidence 6531 11111 23334467778888 89887654 33333100 0134667788889999
Q ss_pred CEEeeecccCCCCCcc-cccCCCCHHHHHHHHHHHHhcCcceeccC
Q 018731 278 DILTLGQYLQPTPLHL-TVKEYVTPEKFDFWKAYGESIGFRYVASG 322 (351)
Q Consensus 278 d~i~i~~~l~PTp~~~-~~~~~v~~~e~~~~~~~~~~~G~~~~~~~ 322 (351)
|.+.+. +=.--..+. +....+..+.+.+++ +..++..+.+|
T Consensus 170 D~LAva-iGt~HG~Yk~~~~p~Ld~~~L~~I~---~~~~~PLVlHG 211 (307)
T 3n9r_A 170 DYLAPA-IGTSHGAFKFKGEPKLDFERLQEVK---RLTNIPLVLHG 211 (307)
T ss_dssp SEEEEC-SSCCSSSBCCSSSCCCCHHHHHHHH---HHHCSCEEESS
T ss_pred CEEEEe-cCCcccccCCCCCCccCHHHHHHHH---hcCCCCeEEeC
Confidence 987773 211111221 112345555555553 23355555443
No 135
>3gk0_A PNP synthase, pyridoxine 5'-phosphate synthase; decode, ssgcid, niaid, SBRI, cytoplasm, pyridoxine biosynthesis, transferase; HET: DXP; 2.28A {Burkholderia pseudomallei}
Probab=78.40 E-value=36 Score=30.19 Aligned_cols=128 Identities=15% Similarity=0.099 Sum_probs=80.1
Q ss_pred HHHHHHHHHhCCCcEEEEeccCCCCCCCCcHHHHHHHHHHHHHhCCCcEEEEeecCCCCCHHHHHHHHHcCCCeeecchh
Q 018731 136 PENTAKAIASWGVDYIVLTSVDRDDIPDGGSGHFARTVKAMKKQKPDIMVECLTSDFRGDLRAVETLVHSGLDVFAHNIE 215 (351)
Q Consensus 136 i~~~~~~~~~~G~~~I~ltgg~~~~l~~~~~~~~~~li~~ik~~~p~i~i~~~~~~~~~~~e~l~~L~~aG~~~i~~~ie 215 (351)
+.+.+......|.+.|.+== ++|-..-...++..+-+.++ -.+++++.. ++|+++...+...+.+.+-.|
T Consensus 55 pv~aA~~ae~aGAdGITvHl--ReDrRHI~d~Dv~~L~~~i~---t~lNlEma~-----t~emi~ial~~kP~~vtLVPE 124 (278)
T 3gk0_A 55 PVRAALAAEDAGADAITLHL--REDRRHIVDADVRTLRPRVK---TRMNLECAV-----TPEMLDIACEIRPHDACLVPE 124 (278)
T ss_dssp HHHHHHHHHHTTCSEEEEEC--CTTCSSSCHHHHHHHHHHCS---SCEEEEECS-----SHHHHHHHHHHCCSEEEECCC
T ss_pred HHHHHHHHHHcCCCEEEecc--CCCcccCCHHHHHHHHHHcC---CCEEeecCC-----CHHHHHHHHHcCCCEEEECCC
Confidence 44555556678999987721 11111111234443333322 256788733 789999999999999998877
Q ss_pred chHHHH-hhhcCCCCCHHHHHHHHHHHHHhCCCCeEEEeeeeeCCCCHHHHHHHHHHHHhCCCCEEeee
Q 018731 216 TVKRLQ-RIVRDPRAGYEQSLEVLKHAKLSKKGLITKSSIMLGLGESDDDLKEAMADLRSIDVDILTLG 283 (351)
Q Consensus 216 s~~~~~-~~~r~~~~~~~~~l~~i~~~~~~~~Gi~v~~~~IvGlgEt~e~~~~~l~~l~~lg~d~i~i~ 283 (351)
.-+++. ..--+-....+...+.++.+++ .||+|+..+ .-.. +.++...++|.+.|-++
T Consensus 125 kreE~TTegGlDv~~~~~~L~~~i~~L~~--~GIrVSLFI----Dpd~----~qI~aA~~~GAd~IELh 183 (278)
T 3gk0_A 125 KRSELTTEGGLDVVGHFDAVRAACKQLAD--AGVRVSLFI----DPDE----AQIRAAHETGAPVIELH 183 (278)
T ss_dssp SGGGBCSSSSBCTTTTHHHHHHHHHHHHH--TTCEEEEEE----CSCH----HHHHHHHHHTCSEEEEC
T ss_pred CCCCcCCCcchhhhccHHHHHHHHHHHHH--CCCEEEEEe----CCCH----HHHHHHHHhCcCEEEEe
Confidence 755532 1100113467778888999999 999876543 2223 34566788999999984
No 136
>3gr7_A NADPH dehydrogenase; flavin, FMN, beta-alpha-barrel, oxidoreductase, flavoprotein; HET: FMN; 2.30A {Geobacillus kaustophilus} PDB: 3gr8_A*
Probab=77.94 E-value=11 Score=34.76 Aligned_cols=79 Identities=15% Similarity=0.114 Sum_probs=54.0
Q ss_pred CCchhHHHHHHHHHhCCCcEEEEeccCCCC--CCCCcHHHHHHHHHHHHHhCCCcEEEEeecCCCCCHHHHHHHHHcC-C
Q 018731 131 PDPMEPENTAKAIASWGVDYIVLTSVDRDD--IPDGGSGHFARTVKAMKKQKPDIMVECLTSDFRGDLRAVETLVHSG-L 207 (351)
Q Consensus 131 ~~~eei~~~~~~~~~~G~~~I~ltgg~~~~--l~~~~~~~~~~li~~ik~~~p~i~i~~~~~~~~~~~e~l~~L~~aG-~ 207 (351)
.+.++..+.++.+.+.|+..|.++.|.... .+. +.....++++.+++.. ++.|-+ .++..+.+.++.+.+.| +
T Consensus 226 ~~~~~~~~la~~L~~~Gvd~i~vs~g~~~~~~~~~-~~~~~~~~~~~ik~~~-~iPVi~--~GgI~s~e~a~~~L~~G~a 301 (340)
T 3gr7_A 226 LTAKDYVPYAKRMKEQGVDLVDVSSGAIVPARMNV-YPGYQVPFAELIRREA-DIPTGA--VGLITSGWQAEEILQNGRA 301 (340)
T ss_dssp CCGGGHHHHHHHHHHTTCCEEEEECCCSSCCCCCC-CTTTTHHHHHHHHHHT-TCCEEE--ESSCCCHHHHHHHHHTTSC
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEecCCccCCCCCC-CccccHHHHHHHHHHc-CCcEEe--eCCCCCHHHHHHHHHCCCe
Confidence 346788899999999999999997543111 111 1123456777888765 455433 44555888899988888 9
Q ss_pred Ceeecc
Q 018731 208 DVFAHN 213 (351)
Q Consensus 208 ~~i~~~ 213 (351)
|.|.++
T Consensus 302 D~V~iG 307 (340)
T 3gr7_A 302 DLVFLG 307 (340)
T ss_dssp SEEEEC
T ss_pred eEEEec
Confidence 999876
No 137
>3paj_A Nicotinate-nucleotide pyrophosphorylase, carboxyl; TIM barrel, pyridin dicarboxylate, 5-phospho-alpha-D-ribose 1-diphosphate; 2.00A {Vibrio cholerae o1 biovar el tor}
Probab=77.85 E-value=8.5 Score=35.20 Aligned_cols=63 Identities=19% Similarity=0.180 Sum_probs=45.4
Q ss_pred HHHHHHHhCCCcEEEEeccCCCCCCCCcHHHHHHHHHHHHHhCCCcEEEEeecCCCCCHHHHHHHHHcCCCeeecch
Q 018731 138 NTAKAIASWGVDYIVLTSVDRDDIPDGGSGHFARTVKAMKKQKPDIMVECLTSDFRGDLRAVETLVHSGLDVFAHNI 214 (351)
Q Consensus 138 ~~~~~~~~~G~~~I~ltgg~~~~l~~~~~~~~~~li~~ik~~~p~i~i~~~~~~~~~~~e~l~~L~~aG~~~i~~~i 214 (351)
++++++.+.|++.|.|-. ++ .+.+.+.++.++ +.+.+++ .++ ++++.+..+++.|+|.|++|-
T Consensus 242 dea~eAl~aGaD~I~LDn-----~~---~~~l~~av~~l~---~~v~iea--SGG-It~~~I~~~a~tGVD~isvGa 304 (320)
T 3paj_A 242 AELEEAISAGADIIMLDN-----FS---LEMMREAVKINA---GRAALEN--SGN-ITLDNLKECAETGVDYISVGA 304 (320)
T ss_dssp HHHHHHHHTTCSEEEEES-----CC---HHHHHHHHHHHT---TSSEEEE--ESS-CCHHHHHHHHTTTCSEEECTH
T ss_pred HHHHHHHHcCCCEEEECC-----CC---HHHHHHHHHHhC---CCCeEEE--ECC-CCHHHHHHHHHcCCCEEEECc
Confidence 455566678999888832 22 467777776654 3567776 344 499999999999999998864
No 138
>4hb7_A Dihydropteroate synthase; transferase; 1.95A {Staphylococcus aureus} PDB: 1ad1_A 1ad4_A*
Probab=77.80 E-value=3.1 Score=37.15 Aligned_cols=136 Identities=20% Similarity=0.190 Sum_probs=76.9
Q ss_pred CCchhHHHHHHHHHhCCCcEEEEeccCC-CC---CC-CCcHHHHHHHHHHHHHhCCCcEEEEeecCCCCCHHHHHHHHHc
Q 018731 131 PDPMEPENTAKAIASWGVDYIVLTSVDR-DD---IP-DGGSGHFARTVKAMKKQKPDIMVECLTSDFRGDLRAVETLVHS 205 (351)
Q Consensus 131 ~~~eei~~~~~~~~~~G~~~I~ltgg~~-~~---l~-~~~~~~~~~li~~ik~~~p~i~i~~~~~~~~~~~e~l~~L~~a 205 (351)
.+.+...+.++++.+.|+.-|-+.|... |. .+ +.+++++..+++.|++ +++.|.+=| ...+.++.-.++
T Consensus 27 ~~~~~a~~~a~~m~~~GAdiIDIGgeSTRPga~~vs~eeE~~Rv~pvi~~l~~--~~v~iSIDT----~~~~Va~~al~a 100 (270)
T 4hb7_A 27 NNVETAINRVKAMIDEGADIIDVGGVSTRPGHEMVTLEEELNRVLPVVEAIVG--FDVKISVDT----FRSEVAEACLKL 100 (270)
T ss_dssp CHHHHHHHHHHHHHHTTCSEEEEESCCCSTTCCCCCHHHHHHHHHHHHHHHTT--SSSEEEEEC----SCHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHCCCCEEEECCccCCCCCCCCchHHHHHHHHHHHHHhhc--CCCeEEEEC----CCHHHHHHHHHh
Confidence 3467788888899999999888865321 11 11 1234566777777764 366655422 257788888888
Q ss_pred CCCeee-cc-hhchHHHHhhh------------c-CCCC-C-----HHHHHHHHHHHHHhCCCCe---EEEeeeeeCCCC
Q 018731 206 GLDVFA-HN-IETVKRLQRIV------------R-DPRA-G-----YEQSLEVLKHAKLSKKGLI---TKSSIMLGLGES 261 (351)
Q Consensus 206 G~~~i~-~~-ies~~~~~~~~------------r-~~~~-~-----~~~~l~~i~~~~~~~~Gi~---v~~~~IvGlgEt 261 (351)
|.+.|+ ++ ...-.++.+.+ + .|.+ + .....+.++.+.+ .|+. +-.|==+|||.|
T Consensus 101 Ga~iINDVs~g~~d~~m~~~va~~~~~~vlMH~~~~p~~~~vv~ev~~~l~~~i~~a~~--aGI~~~~IilDPGiGFgKt 178 (270)
T 4hb7_A 101 GVDMINDQWAGLYDHRMFQIVAKYDAEIILMHNGNGNRDEPVVEEMLTSLLAQAHQAKI--AGIPSNKIWLDPGIGFAKT 178 (270)
T ss_dssp TCCEEEETTTTSSCTHHHHHHHHTTCEEEEECCCSSCCSSCHHHHHHHHHHHHHHHHHH--TTCCGGGEEEECCTTSSCC
T ss_pred ccceeccccccccchhHHHHHHHcCCCeEEeccccCCccccchhHHHHHHHHHHHHHHH--cCCCCceEEEeCCCCcccc
Confidence 888776 21 11001111110 0 0111 1 1233445667777 8984 445544577888
Q ss_pred HHHHHHHHHHHHh
Q 018731 262 DDDLKEAMADLRS 274 (351)
Q Consensus 262 ~e~~~~~l~~l~~ 274 (351)
.++=.+.++.+.+
T Consensus 179 ~~~N~~ll~~l~~ 191 (270)
T 4hb7_A 179 RNEEAEVMARLDE 191 (270)
T ss_dssp HHHHHHHHTCHHH
T ss_pred cccHHHHHhhHHH
Confidence 8876666555543
No 139
>1vli_A Spore coat polysaccharide biosynthesis protein SP; 2636322, JCSG, protein structure initiative, BS SPSE, PSI; 2.38A {Bacillus subtilis} SCOP: b.85.1.1 c.1.10.6
Probab=77.70 E-value=28 Score=32.61 Aligned_cols=109 Identities=12% Similarity=0.120 Sum_probs=69.0
Q ss_pred CchhHHHHHHHHHhCCCcEEEEeccCCCCC--------C----------------CCcHHHHHHHHHHHHHhCCCcEEEE
Q 018731 132 DPMEPENTAKAIASWGVDYIVLTSVDRDDI--------P----------------DGGSGHFARTVKAMKKQKPDIMVEC 187 (351)
Q Consensus 132 ~~eei~~~~~~~~~~G~~~I~ltgg~~~~l--------~----------------~~~~~~~~~li~~ik~~~p~i~i~~ 187 (351)
+.+...+.++.+++.|++-|-++.-.++.+ . ..+.+++..|.+..++. ++.+-
T Consensus 42 sle~A~~li~~Ak~aGAdavKfQ~~k~~tl~s~~~~~fq~~~~~~~~~ye~~~~~~l~~e~~~~L~~~~~~~--Gi~~~- 118 (385)
T 1vli_A 42 KLDQAFALIDAAAEAGADAVKFQMFQADRMYQKDPGLYKTAAGKDVSIFSLVQSMEMPAEWILPLLDYCREK--QVIFL- 118 (385)
T ss_dssp CHHHHHHHHHHHHHHTCSEEEECCBCGGGGTSCCC---------CCCHHHHGGGBSSCGGGHHHHHHHHHHT--TCEEE-
T ss_pred cHHHHHHHHHHHHHhCCCEEeeeeeccCcccCcchhhhccCCCCCccHHHHHHhcCCCHHHHHHHHHHHHHc--CCcEE-
Confidence 567788889999999999888854333221 1 01235566666666654 55543
Q ss_pred eecCCCCCHHHHHHHHHcCCCeeecchhchHH--HHhhh---cC-----CC-CCHHHHHHHHHHHHHhCCCC
Q 018731 188 LTSDFRGDLRAVETLVHSGLDVFAHNIETVKR--LQRIV---RD-----PR-AGYEQSLEVLKHAKLSKKGL 248 (351)
Q Consensus 188 ~~~~~~~~~e~l~~L~~aG~~~i~~~ies~~~--~~~~~---r~-----~~-~~~~~~l~~i~~~~~~~~Gi 248 (351)
+.- .|.+.++.|.+.|++.+.++--.... +.+.+ .+ ++ .+.+++..+++.+++ .|-
T Consensus 119 -stp--fD~~svd~l~~~~vd~~KIgS~~~~N~pLL~~va~~gKPViLStGmaTl~Ei~~Ave~i~~--~Gn 185 (385)
T 1vli_A 119 -STV--CDEGSADLLQSTSPSAFKIASYEINHLPLLKYVARLNRPMIFSTAGAEISDVHEAWRTIRA--EGN 185 (385)
T ss_dssp -CBC--CSHHHHHHHHTTCCSCEEECGGGTTCHHHHHHHHTTCSCEEEECTTCCHHHHHHHHHHHHT--TTC
T ss_pred -Ecc--CCHHHHHHHHhcCCCEEEECcccccCHHHHHHHHhcCCeEEEECCCCCHHHHHHHHHHHHH--CCC
Confidence 332 48999999999999999875322211 11111 10 11 378999999999987 665
No 140
>1jvn_A Glutamine, bifunctional histidine biosynthesis protein hishf; substrate channeling, amidotransferase, TIM-barrel AS A SUBS tunnel; HET: 143; 2.10A {Saccharomyces cerevisiae} SCOP: c.1.2.1 c.23.16.1 PDB: 1ox4_B* 1ox5_A* 1ox6_A 1ox4_A
Probab=77.41 E-value=10 Score=37.48 Aligned_cols=82 Identities=13% Similarity=0.071 Sum_probs=52.7
Q ss_pred chhHHHHHHHHHhCCCcEEEEeccCCCCCC-CCcHHHHHHHHHHHHHhCCCcEEEEeecCCCCCH-----------HHHH
Q 018731 133 PMEPENTAKAIASWGVDYIVLTSVDRDDIP-DGGSGHFARTVKAMKKQKPDIMVECLTSDFRGDL-----------RAVE 200 (351)
Q Consensus 133 ~eei~~~~~~~~~~G~~~I~ltgg~~~~l~-~~~~~~~~~li~~ik~~~p~i~i~~~~~~~~~~~-----------e~l~ 200 (351)
..++.+.++.+.+.|++++++..-+.. .. ..+.....++++.+++.. .+.+.+ .++..+. +.++
T Consensus 279 ~~dp~~~A~~~~~~Ga~~l~~~dl~~~-~~~~~~~~~~~~~i~~i~~~~-~ipi~v--gGGIr~~~d~~~~~~~~~~~a~ 354 (555)
T 1jvn_A 279 LGKPVQLAQKYYQQGADEVTFLNITSF-RDCPLKDTPMLEVLKQAAKTV-FVPLTV--GGGIKDIVDVDGTKIPALEVAS 354 (555)
T ss_dssp CHHHHHHHHHHHHTTCSEEEEEEEC----CCCGGGCHHHHHHHHHTTTC-CSCEEE--ESSCSCEECTTCCEECHHHHHH
T ss_pred cCCHHHHHHHHHHcCCCEEEEEeCCcc-ccccCCCchHHHHHHHHHhhC-CCcEEE--eCccccchhcccccchHHHHHH
Confidence 347888999999999999887544321 10 001123567788887653 444443 2333332 7799
Q ss_pred HHHHcCCCeeecchhchH
Q 018731 201 TLVHSGLDVFAHNIETVK 218 (351)
Q Consensus 201 ~L~~aG~~~i~~~ies~~ 218 (351)
.+.++|.+.|.++-....
T Consensus 355 ~~l~aGad~V~igt~~~~ 372 (555)
T 1jvn_A 355 LYFRSGADKVSIGTDAVY 372 (555)
T ss_dssp HHHHHTCSEEEECHHHHH
T ss_pred HHHHcCCCEEEECCHHhh
Confidence 999999999999876654
No 141
>3rmj_A 2-isopropylmalate synthase; LEUA, truncation, neisseria MENI TIM barrel, catalytic domain, dimer, leucine biosynthesis, ketoisovalerate; 1.95A {Neisseria meningitidis}
Probab=77.22 E-value=12 Score=34.98 Aligned_cols=101 Identities=11% Similarity=0.078 Sum_probs=64.3
Q ss_pred CCchhHHHHHHHHHhCCCcEEEEeccCCCCCCCCcHHHHHHHHHHHHHhCCC---cEEEEe-ecCCCCCHHHHHHHHHcC
Q 018731 131 PDPMEPENTAKAIASWGVDYIVLTSVDRDDIPDGGSGHFARTVKAMKKQKPD---IMVECL-TSDFRGDLRAVETLVHSG 206 (351)
Q Consensus 131 ~~~eei~~~~~~~~~~G~~~I~ltgg~~~~l~~~~~~~~~~li~~ik~~~p~---i~i~~~-~~~~~~~~e~l~~L~~aG 206 (351)
.+++.+.+.++.+.+.|+..|.|..-..-.. ...+.++++.+++..|+ +.+.+- +++.-+--.-.-.-.++|
T Consensus 154 ~~~~~~~~~~~~~~~~Ga~~i~l~DT~G~~~----P~~~~~lv~~l~~~~~~~~~~~l~~H~Hnd~GlAvAN~laAv~aG 229 (370)
T 3rmj_A 154 SEIDFLAEICGAVIEAGATTINIPDTVGYSI----PYKTEEFFRELIAKTPNGGKVVWSAHCHNDLGLAVANSLAALKGG 229 (370)
T ss_dssp SCHHHHHHHHHHHHHHTCCEEEEECSSSCCC----HHHHHHHHHHHHHHSTTGGGSEEEEECBCTTSCHHHHHHHHHHTT
T ss_pred cCHHHHHHHHHHHHHcCCCEEEecCccCCcC----HHHHHHHHHHHHHhCCCcCceEEEEEeCCCCChHHHHHHHHHHhC
Confidence 4567888899999999999999943332212 37899999999998876 555442 333322223333445789
Q ss_pred CCeeecchhchHHHHhhhcCCCCCHHHHHHHHHH
Q 018731 207 LDVFAHNIETVKRLQRIVRDPRAGYEQSLEVLKH 240 (351)
Q Consensus 207 ~~~i~~~ies~~~~~~~~r~~~~~~~~~l~~i~~ 240 (351)
++.|...+-.+-+ .. .....++.+-.++.
T Consensus 230 a~~vd~tv~GlGe---ra--GN~~lE~vv~~L~~ 258 (370)
T 3rmj_A 230 ARQVECTVNGLGE---RA--GNASVEEIVMALKV 258 (370)
T ss_dssp CCEEEEBGGGCSS---TT--CBCBHHHHHHHHHH
T ss_pred CCEEEEeccccCc---cc--ccccHHHHHHHHHh
Confidence 9999765544322 11 12467777776654
No 142
>1qop_A Tryptophan synthase alpha chain; lyase, carbon-oxygen lyase, tryptophan biosynthesis, pyridoxal phosphate; HET: IPL PLP; 1.4A {Salmonella typhimurium} SCOP: c.1.2.4 PDB: 1k8x_A* 1wbj_A* 2clk_A* 2j9z_A* 3cep_A* 1k8y_A* 1a5s_A* 1a50_A* 1c29_A* 1c8v_A* 1c9d_A* 1bks_A* 1cx9_A* 1fuy_A* 1cw2_A* 1k7e_A* 1k7f_A* 1k7x_A* 1k3u_A* 1k8z_A* ...
Probab=77.17 E-value=38 Score=29.78 Aligned_cols=82 Identities=16% Similarity=0.173 Sum_probs=51.4
Q ss_pred CchhHHHHHHHHHhCCCcEEEEeccCCCCCCCCc---------------HHHHHHHHHHHHHhCCCcEEEEee--cC-C-
Q 018731 132 DPMEPENTAKAIASWGVDYIVLTSVDRDDIPDGG---------------SGHFARTVKAMKKQKPDIMVECLT--SD-F- 192 (351)
Q Consensus 132 ~~eei~~~~~~~~~~G~~~I~ltgg~~~~l~~~~---------------~~~~~~li~~ik~~~p~i~i~~~~--~~-~- 192 (351)
+.++..+.++.+.+.|++.|.+..-..+.+.|+. .....++++.+++.++++.+.+++ +. +
T Consensus 29 ~~~~~~~~~~~l~~~GaD~ieig~P~sdp~~DG~~i~~a~~~al~~G~~~~~~~~~v~~ir~~~~~~Pv~lm~y~n~v~~ 108 (268)
T 1qop_A 29 GIEQSLKIIDTLIDAGADALELGVPFSDPLADGPTIQNANLRAFAAGVTPAQCFEMLAIIREKHPTIPIGLLMYANLVFN 108 (268)
T ss_dssp CHHHHHHHHHHHHHTTCSSEEEECCCSCCTTCCHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCSSSCEEEEECHHHHHT
T ss_pred CHHHHHHHHHHHHHCCCCEEEECCCCCCccCCCHHHHHHHHHHHHcCCCHHHHHHHHHHHHhcCCCCCEEEEEcccHHHH
Confidence 3467788888999999998888331111122221 133458899998874455554432 11 1
Q ss_pred CCCHHHHHHHHHcCCCeeecc
Q 018731 193 RGDLRAVETLVHSGLDVFAHN 213 (351)
Q Consensus 193 ~~~~e~l~~L~~aG~~~i~~~ 213 (351)
...+..++.++++|+|.+.+.
T Consensus 109 ~g~~~~~~~~~~aGadgii~~ 129 (268)
T 1qop_A 109 NGIDAFYARCEQVGVDSVLVA 129 (268)
T ss_dssp TCHHHHHHHHHHHTCCEEEET
T ss_pred hhHHHHHHHHHHcCCCEEEEc
Confidence 113688999999999987653
No 143
>3o6c_A PNP synthase, pyridoxine 5'-phosphate synthase; structural genomics, IDP90671, center for structural genomic infectious diseases; HET: MSE; 1.87A {Campylobacter jejuni subsp} SCOP: c.1.24.0 PDB: 3o6d_A*
Probab=77.05 E-value=19 Score=31.72 Aligned_cols=130 Identities=15% Similarity=0.132 Sum_probs=77.8
Q ss_pred hhHHHHHHHHHhCCCcEEEEeccC--------CCCCCCCcHHHHHHHHHHHHHhCCCcEEEEeecCCCCCHHHHHHHHHc
Q 018731 134 MEPENTAKAIASWGVDYIVLTSVD--------RDDIPDGGSGHFARTVKAMKKQKPDIMVECLTSDFRGDLRAVETLVHS 205 (351)
Q Consensus 134 eei~~~~~~~~~~G~~~I~ltgg~--------~~~l~~~~~~~~~~li~~ik~~~p~i~i~~~~~~~~~~~e~l~~L~~a 205 (351)
+++++.+..+ ....++|.--. +-++ ..+.+.++++.+++. ++.+..+.. -+.+.++.-++.
T Consensus 76 ~emi~ial~~---kP~~vtLVPEkreE~TTegGldv---~~~~L~~~i~~L~~~--GIrVSLFID---pd~~qi~aA~~~ 144 (260)
T 3o6c_A 76 DEILNLALKL---KPHRVTLVPEKREELTTEGGLCL---NHAKLKQSIEKLQNA--NIEVSLFIN---PSLEDIEKSKIL 144 (260)
T ss_dssp HHHHHHHHHH---CCSEEEECCCSGGGBCTTSSBCT---TCTTHHHHHHHHHHT--TCEEEEEEC---SCHHHHHHHHHT
T ss_pred HHHHHHHHHc---CCCEEEECCCCCCccCCCCChhh---CHHHHHHHHHHHHHC--CCEEEEEeC---CCHHHHHHHHHh
Confidence 5666655443 46677773211 1112 246889999999987 788877653 168999999999
Q ss_pred CCCeeecchhchHHHHh------------------------hhcCCCCCHHHHHHHHHHHHHhCCCCeEEEeeeeeCCCC
Q 018731 206 GLDVFAHNIETVKRLQR------------------------IVRDPRAGYEQSLEVLKHAKLSKKGLITKSSIMLGLGES 261 (351)
Q Consensus 206 G~~~i~~~ies~~~~~~------------------------~~r~~~~~~~~~l~~i~~~~~~~~Gi~v~~~~IvGlgEt 261 (351)
|.++|-+.-..+-..+. ... ...++...++.+.+++ .|+.|++ |+|=+
T Consensus 145 GAd~IELhTG~YA~a~~~~~sn~~~~~~~~~~l~~~~~~~~~~~--~~el~~l~~aA~~A~~--lGL~VnA----GHGL~ 216 (260)
T 3o6c_A 145 KAQFIELHTGHYANLHNALFSNISHTAFALKELDQDKKTLQAQF--EKELQNLELCAKKGLE--LGLKVAA----GHGLN 216 (260)
T ss_dssp TCSEEEECCHHHHHHHHHHHSSGGGSTTCCGGGCSCHHHHHHHH--HHHHHHHHHHHHHHHH--TTCEEEE----CTTCC
T ss_pred CCCEEEEechHhhhhhhccccccccccccccccccccchhhHHH--HHHHHHHHHHHHHHHH--cCCEEec----CCCCC
Confidence 99999764333222111 001 1244556666777778 8988765 45555
Q ss_pred HHHHHHHHHHHHhC-CCCEEeeeccc
Q 018731 262 DDDLKEAMADLRSI-DVDILTLGQYL 286 (351)
Q Consensus 262 ~e~~~~~l~~l~~l-g~d~i~i~~~l 286 (351)
.+.+... ..+ ++..++++..+
T Consensus 217 y~Nv~~i----a~ip~i~ElnIGHai 238 (260)
T 3o6c_A 217 YKNVKPV----VKIKEICELNIGQSI 238 (260)
T ss_dssp TTTTHHH----HTCTTCCEEEECHHH
T ss_pred HHHHHHH----HhCCCCeEEecCHHH
Confidence 5554322 222 45667776544
No 144
>1ka9_F Imidazole glycerol phosphtate synthase; riken structural genomics/proteomics initiative, RSGI, structural genomics, transferase; 2.30A {Thermus thermophilus} SCOP: c.1.2.1
Probab=77.01 E-value=29 Score=29.87 Aligned_cols=98 Identities=18% Similarity=0.157 Sum_probs=59.5
Q ss_pred hHHHHHHHHHhCCCcEEEEeccCCCCCCCCcHHHHHHHHHHHHHhCCCcEEEEeecCCCCCHHHHHHHHHcCCCeeecch
Q 018731 135 EPENTAKAIASWGVDYIVLTSVDRDDIPDGGSGHFARTVKAMKKQKPDIMVECLTSDFRGDLRAVETLVHSGLDVFAHNI 214 (351)
Q Consensus 135 ei~~~~~~~~~~G~~~I~ltgg~~~~l~~~~~~~~~~li~~ik~~~p~i~i~~~~~~~~~~~e~l~~L~~aG~~~i~~~i 214 (351)
...+.++.+.+.|+..|++++...+... .+.+ .++++.+++.. ++.+-+ .++..+.+.+..+.++|++.+.++
T Consensus 153 ~~~e~~~~~~~~G~~~i~~~~~~~~g~~-~g~~--~~~i~~l~~~~-~ipvia--~GGI~~~~d~~~~~~~Gadgv~vg- 225 (252)
T 1ka9_F 153 HAVEWAVKGVELGAGEILLTSMDRDGTK-EGYD--LRLTRMVAEAV-GVPVIA--SGGAGRMEHFLEAFQAGAEAALAA- 225 (252)
T ss_dssp EHHHHHHHHHHHTCCEEEEEETTTTTTC-SCCC--HHHHHHHHHHC-SSCEEE--ESCCCSHHHHHHHHHTTCSEEEES-
T ss_pred cHHHHHHHHHHcCCCEEEEecccCCCCc-CCCC--HHHHHHHHHHc-CCCEEE--eCCCCCHHHHHHHHHCCCHHHHHH-
Confidence 3455666677789999999865432111 1111 45666666653 445433 455557788888889999998765
Q ss_pred hchHHHHhhhcCCCCCHHHHHHHHHHHHHhCCCCeEE
Q 018731 215 ETVKRLQRIVRDPRAGYEQSLEVLKHAKLSKKGLITK 251 (351)
Q Consensus 215 es~~~~~~~~r~~~~~~~~~l~~i~~~~~~~~Gi~v~ 251 (351)
+.+++ ...++.+.++.+ .+ .|+.+.
T Consensus 226 ---sal~~----~~~~~~~~~~~l---~~--~~~~~~ 250 (252)
T 1ka9_F 226 ---SVFHF----GEIPIPKLKRYL---AE--KGVHVR 250 (252)
T ss_dssp ---HHHHT----TSSCHHHHHHHH---HH--TTCCBC
T ss_pred ---HHHHc----CCCCHHHHHHHH---HH--CCCCcC
Confidence 23332 234777666654 44 677653
No 145
>4gj1_A 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino) methylideneamino] imidazole-4-carboxamide...; HISA, csgid, niaid,; 2.15A {Campylobacter jejuni subsp}
Probab=76.84 E-value=26 Score=30.40 Aligned_cols=91 Identities=19% Similarity=0.199 Sum_probs=58.4
Q ss_pred hhHHHHHHHHHhCCCcEEEEeccCCCCCCCCcHHHHHHHHHHHHHhCCCcEEEEeecCCCCCHHHHHHHHHcCCCeeecc
Q 018731 134 MEPENTAKAIASWGVDYIVLTSVDRDDIPDGGSGHFARTVKAMKKQKPDIMVECLTSDFRGDLRAVETLVHSGLDVFAHN 213 (351)
Q Consensus 134 eei~~~~~~~~~~G~~~I~ltgg~~~~l~~~~~~~~~~li~~ik~~~p~i~i~~~~~~~~~~~e~l~~L~~aG~~~i~~~ 213 (351)
..+.+.++.+.+.|+.+|++|+.+.+-... |. . .++++.+.+..+++.+-+ .++..+.+.++.|+ .+++.+.++
T Consensus 151 ~~~~~~~~~~~~~g~~eil~t~Id~DGt~~-G~-d-~~l~~~l~~~~~~ipvia--sGGv~~~~Dl~~l~-~~~~gvivg 224 (243)
T 4gj1_A 151 KKLMEVLDFYSNKGLKHILCTDISKDGTMQ-GV-N-VRLYKLIHEIFPNICIQA--SGGVASLKDLENLK-GICSGVIVG 224 (243)
T ss_dssp CBHHHHHHHHHTTTCCEEEEEETTC------CC-C-HHHHHHHHHHCTTSEEEE--ESCCCSHHHHHHTT-TTCSEEEEC
T ss_pred chHHHHHHHHhhcCCcEEEeeeeccccccc-CC-C-HHHHHHHHHhcCCCCEEE--EcCCCCHHHHHHHH-ccCchhehH
Confidence 445677788889999999999876532211 11 1 356777777667777654 45666888888885 456665443
Q ss_pred hhchHHHHhhhcCCCCCHHHHHHHH
Q 018731 214 IETVKRLQRIVRDPRAGYEQSLEVL 238 (351)
Q Consensus 214 ies~~~~~~~~r~~~~~~~~~l~~i 238 (351)
+.+|. ...+.++.++.+
T Consensus 225 ----~Al~~----g~i~l~ea~~~l 241 (243)
T 4gj1_A 225 ----KALLD----GVFSVEEGIRCL 241 (243)
T ss_dssp ----HHHHT----TSSCHHHHHHHH
T ss_pred ----HHHHC----CCCCHHHHHHHh
Confidence 44553 256888777655
No 146
>3l0g_A Nicotinate-nucleotide pyrophosphorylase; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ALS collaborative crystallography; 2.05A {Ehrlichia chaffeensis}
Probab=76.81 E-value=5.1 Score=36.27 Aligned_cols=64 Identities=20% Similarity=0.322 Sum_probs=46.8
Q ss_pred HHHHHHHHhCCCcEEEEeccCCCCCCCCcHHHHHHHHHHHHHhCCCcEEEEeecCCCCCHHHHHHHHHcCCCeeecch
Q 018731 137 ENTAKAIASWGVDYIVLTSVDRDDIPDGGSGHFARTVKAMKKQKPDIMVECLTSDFRGDLRAVETLVHSGLDVFAHNI 214 (351)
Q Consensus 137 ~~~~~~~~~~G~~~I~ltgg~~~~l~~~~~~~~~~li~~ik~~~p~i~i~~~~~~~~~~~e~l~~L~~aG~~~i~~~i 214 (351)
.++++++.+.|++.|.| |.++ .+.+.+.++.++. .+.+++ .++ ++.+.+..+++.|+|.|+.|.
T Consensus 217 l~e~~eAl~aGaDiImL-----Dn~s---~~~l~~av~~~~~---~v~lea--SGG-It~~~i~~~A~tGVD~IsvGa 280 (300)
T 3l0g_A 217 ISQVEESLSNNVDMILL-----DNMS---ISEIKKAVDIVNG---KSVLEV--SGC-VNIRNVRNIALTGVDYISIGC 280 (300)
T ss_dssp HHHHHHHHHTTCSEEEE-----ESCC---HHHHHHHHHHHTT---SSEEEE--ESS-CCTTTHHHHHTTTCSEEECGG
T ss_pred HHHHHHHHHcCCCEEEE-----CCCC---HHHHHHHHHhhcC---ceEEEE--ECC-CCHHHHHHHHHcCCCEEEeCc
Confidence 35666667789998888 2344 4677787777653 467776 344 388999999999999998763
No 147
>3c6c_A 3-keto-5-aminohexanoate cleavage enzyme; DUF849 family protein, TIM beta/alpha-barrel fold, structura genomics; HET: MSE; 1.72A {Ralstonia eutropha}
Probab=76.68 E-value=15 Score=33.60 Aligned_cols=86 Identities=14% Similarity=0.097 Sum_probs=54.9
Q ss_pred CCCCchhHHHHHHHHHhCCCcEEEEeccCC-CCCCCCcHHHHHHHHHHHHHhCCCcEEEEeecC-----CC---------
Q 018731 129 APPDPMEPENTAKAIASWGVDYIVLTSVDR-DDIPDGGSGHFARTVKAMKKQKPDIMVECLTSD-----FR--------- 193 (351)
Q Consensus 129 ~~~~~eei~~~~~~~~~~G~~~I~ltgg~~-~~l~~~~~~~~~~li~~ik~~~p~i~i~~~~~~-----~~--------- 193 (351)
.+.+++|+.+.+.+..+.|..-+.+=.=++ +--+..+.+.|.++++.|++..|++-|...|.. +.
T Consensus 43 lPvTpeEIa~~A~~a~~AGAaivHlHvRd~~~G~ps~d~~~y~e~~~~IR~~~~d~ii~~TTg~gg~~~g~~~~p~~~~~ 122 (316)
T 3c6c_A 43 MPITPAQIADACVEAAKAGASVAHIHVRDPKTGGGSRDPVLFKEVVDRVRSSGTDIVLNLTCGLGAFLLPDPEDESKALP 122 (316)
T ss_dssp CCCSHHHHHHHHHHHHHHTCSEEEECEECTTTCCEECCHHHHHHHHHHHHTTTCCCEEEEECCCSEEECEETTEEEEECT
T ss_pred CCCCHHHHHHHHHHHHHcCCcEEEEeecCCCCCCcCCCHHHHHHHHHHHHHHCCCeEEEeCCCccccccCcccCcccccc
Confidence 456889999999999999988766622121 001222368999999999987778766654420 11
Q ss_pred -----CCHHHHHHHHHcCCCeeecch
Q 018731 194 -----GDLRAVETLVHSGLDVFAHNI 214 (351)
Q Consensus 194 -----~~~e~l~~L~~aG~~~i~~~i 214 (351)
..++.+..+.+...+..+++.
T Consensus 123 ~~~l~~~eeR~~~~~~~~Pe~aSl~~ 148 (316)
T 3c6c_A 123 ESDVVPVAERVKHLEDCLPEIASLDI 148 (316)
T ss_dssp TCEECCHHHHTHHHHHHCCSEEEEEC
T ss_pred ccccCCHHHHHHHHHhcCCCeEEecc
Confidence 134555555555778775543
No 148
>3gnn_A Nicotinate-nucleotide pyrophosphorylase; decode biostructures, ssgcid, niaid, SBRI, UWPPG, glycosyltransferase, transferase, structural genomics; 2.25A {Burkholderia pseudomallei}
Probab=76.47 E-value=6.7 Score=35.50 Aligned_cols=63 Identities=13% Similarity=0.241 Sum_probs=44.8
Q ss_pred HHHHHHHhCCCcEEEEeccCCCCCCCCcHHHHHHHHHHHHHhCCCcEEEEeecCCCCCHHHHHHHHHcCCCeeecch
Q 018731 138 NTAKAIASWGVDYIVLTSVDRDDIPDGGSGHFARTVKAMKKQKPDIMVECLTSDFRGDLRAVETLVHSGLDVFAHNI 214 (351)
Q Consensus 138 ~~~~~~~~~G~~~I~ltgg~~~~l~~~~~~~~~~li~~ik~~~p~i~i~~~~~~~~~~~e~l~~L~~aG~~~i~~~i 214 (351)
++++++.+.|++.|.|-. ++ .+.+.+.++.+ .+.+.+++ .++ ++++.+..+++.|+|.|++|-
T Consensus 220 de~~eAl~aGaD~I~LDn-----~~---~~~l~~av~~i---~~~v~iea--SGG-I~~~~i~~~a~tGVD~isvG~ 282 (298)
T 3gnn_A 220 DQLRTALAHGARSVLLDN-----FT---LDMMRDAVRVT---EGRAVLEV--SGG-VNFDTVRAIAETGVDRISIGA 282 (298)
T ss_dssp HHHHHHHHTTCEEEEEES-----CC---HHHHHHHHHHH---TTSEEEEE--ESS-CSTTTHHHHHHTTCSEEECGG
T ss_pred HHHHHHHHcCCCEEEECC-----CC---HHHHHHHHHHh---CCCCeEEE--EcC-CCHHHHHHHHHcCCCEEEECC
Confidence 456666678998888832 32 36777777666 34567765 444 388999999999999998764
No 149
>2h9a_B CO dehydrogenase/acetyl-COA synthase, iron- sulfur protein; heterodimer, beta-alpha-barrels, oxidoreductase; HET: B12; 1.90A {Carboxydothermus hydrogenoformans} PDB: 2ycl_B*
Probab=76.15 E-value=44 Score=30.29 Aligned_cols=138 Identities=14% Similarity=0.086 Sum_probs=77.1
Q ss_pred hhHHHHHHHHHhCCCcEEEEeccC-CCCCCCCcHHHHHHHHHHHHHhCCCcEEEE-eecCCCCCHHHHHHHHHcCCC---
Q 018731 134 MEPENTAKAIASWGVDYIVLTSVD-RDDIPDGGSGHFARTVKAMKKQKPDIMVEC-LTSDFRGDLRAVETLVHSGLD--- 208 (351)
Q Consensus 134 eei~~~~~~~~~~G~~~I~ltgg~-~~~l~~~~~~~~~~li~~ik~~~p~i~i~~-~~~~~~~~~e~l~~L~~aG~~--- 208 (351)
+.+.+.++...+.|++-|-+.+.. .+.-.+...+...++++.+++.. ++.+.+ -|.+--.+.+.++.-.++|.+
T Consensus 74 ~~~~~~A~~~v~~GAdiIDIg~~StrP~~~~vs~eee~~vV~~v~~~~-~vplsI~DT~~~~~~~~V~eaal~aga~~k~ 152 (310)
T 2h9a_B 74 NDPVAWAKKCVEYGADIVALRLVSAHPDGQNRSGAELAEVCKAVADAI-DVPLMIIGCGVEEKDAEIFPVIGEALSGRNC 152 (310)
T ss_dssp TCHHHHHHHHHHTTCSEEEEECGGGCTTTTCCCHHHHHHHHHHHHHHC-SSCEEEECCSCHHHHHHHHHHHHHHTTTSCC
T ss_pred HHHHHHHHHHHHcCCcEEEEeCccCCCCCCCCCHHHHHHHHHHHHHhC-CceEEEECCCCCCCCHHHHHHHHHhCCCCCC
Confidence 567788888889999999887632 22222233567777899998764 555544 221111257899999999886
Q ss_pred eee-cchhchHHHHhh---hcC-----CCCCHHHHHHHHHHHHHhCCCC---eEEEeeeeeC-CCCHHHHHHHHHHHHh
Q 018731 209 VFA-HNIETVKRLQRI---VRD-----PRAGYEQSLEVLKHAKLSKKGL---ITKSSIMLGL-GESDDDLKEAMADLRS 274 (351)
Q Consensus 209 ~i~-~~ies~~~~~~~---~r~-----~~~~~~~~l~~i~~~~~~~~Gi---~v~~~~IvGl-gEt~e~~~~~l~~l~~ 274 (351)
-|+ ++.+..+.+... ... ...+.+...+.++.+.+ .|+ .+-.|-.+|+ |-+.+.-...++.++.
T Consensus 153 iINdvs~~~~~~~~~~aa~~g~~vv~m~~~dv~~l~~~~~~a~~--~Gi~~e~IilDPg~g~~g~~~e~~~~~l~~ir~ 229 (310)
T 2h9a_B 153 LLSSATKDNYKPIVATCMVHGHSVVASAPLDINLSKQLNIMIME--MNLAPNRIIMDPLIGALGYGIEYSYSIIERMRL 229 (310)
T ss_dssp EEEEECTTTHHHHHHHHHHHTCEEEEECSSCHHHHHHHHHHHHT--TTCCGGGEEEECCCCCTTTTHHHHHHHHHHHHH
T ss_pred EEEECCCCccHHHHHHHHHhCCCEEEEChhHHHHHHHHHHHHHH--CCCChhhEEEeCCCccccCchHhHHHHHHHHHH
Confidence 343 222222222111 000 01145555556666666 777 2556666663 6454444344444444
No 150
>1thf_D HISF protein; thermophIle, TIM-barrel, histidine biosynthesis, lyase, phosphate-binding sites; 1.45A {Thermotoga maritima} SCOP: c.1.2.1 PDB: 2wjz_A 2a0n_A* 1gpw_A 1vh7_A 2rkx_A 3iio_A 3iip_A* 3iiv_A
Probab=75.93 E-value=16 Score=31.51 Aligned_cols=98 Identities=16% Similarity=0.167 Sum_probs=60.5
Q ss_pred hHHHHHHHHHhCCCcEEEEeccCCCCCCCCcHHHHHHHHHHHHHhCCCcEEEEeecCCCCCHHHHHHHHHcCCCeeecch
Q 018731 135 EPENTAKAIASWGVDYIVLTSVDRDDIPDGGSGHFARTVKAMKKQKPDIMVECLTSDFRGDLRAVETLVHSGLDVFAHNI 214 (351)
Q Consensus 135 ei~~~~~~~~~~G~~~I~ltgg~~~~l~~~~~~~~~~li~~ik~~~p~i~i~~~~~~~~~~~e~l~~L~~aG~~~i~~~i 214 (351)
...+.++.+.+.|+..|++++.+++... .+. -.++++.+++.. ++.+-+ .++..+.+.+..+.++|++.+.++
T Consensus 152 ~~~e~~~~~~~~G~~~i~~~~~~~~g~~-~g~--~~~~~~~l~~~~-~ipvia--~GGI~~~~d~~~~~~~Gadgv~vG- 224 (253)
T 1thf_D 152 LLRDWVVEVEKRGAGEILLTSIDRDGTK-SGY--DTEMIRFVRPLT-TLPIIA--SGGAGKMEHFLEAFLAGADAALAA- 224 (253)
T ss_dssp EHHHHHHHHHHTTCSEEEEEETTTTTSC-SCC--CHHHHHHHGGGC-CSCEEE--ESCCCSHHHHHHHHHTTCSEEEES-
T ss_pred CHHHHHHHHHHCCCCEEEEEeccCCCCC-CCC--CHHHHHHHHHhc-CCCEEE--ECCCCCHHHHHHHHHcCChHHHHH-
Confidence 3556677777899999999876643211 111 145666666643 444433 456657788888889999998765
Q ss_pred hchHHHHhhhcCCCCCHHHHHHHHHHHHHhCCCCeEE
Q 018731 215 ETVKRLQRIVRDPRAGYEQSLEVLKHAKLSKKGLITK 251 (351)
Q Consensus 215 es~~~~~~~~r~~~~~~~~~l~~i~~~~~~~~Gi~v~ 251 (351)
+.+++ ...++++.++. +++ .|+.+.
T Consensus 225 ---sal~~----~~~~~~~~~~~---l~~--~g~~~~ 249 (253)
T 1thf_D 225 ---SVFHF----REIDVRELKEY---LKK--HGVNVR 249 (253)
T ss_dssp ---HHHHT----TCSCHHHHHHH---HHH--TTCCCC
T ss_pred ---HHHHc----CCCCHHHHHHH---HHH--cCCccc
Confidence 23332 13366666554 455 777654
No 151
>1zlp_A PSR132, petal death protein; TIM-barrel, helix swapping,2-ethyl-3-methylmalate lyase, 2-P methylmalate lyase, lyase/PEP mutase superfamily; 2.70A {Dianthus caryophyllus}
Probab=75.68 E-value=24 Score=32.17 Aligned_cols=86 Identities=13% Similarity=0.046 Sum_probs=66.4
Q ss_pred CHHHHHHHHHcCCCeeecchhchH-HHHhhhcCC-CCCHHHHHHHHHHHHHhCCCCeEEEeeeeeCCCCHHHHHHHHHHH
Q 018731 195 DLRAVETLVHSGLDVFAHNIETVK-RLQRIVRDP-RAGYEQSLEVLKHAKLSKKGLITKSSIMLGLGESDDDLKEAMADL 272 (351)
Q Consensus 195 ~~e~l~~L~~aG~~~i~~~ies~~-~~~~~~r~~-~~~~~~~l~~i~~~~~~~~Gi~v~~~~IvGlgEt~e~~~~~l~~l 272 (351)
|.-....+.++|++.|.++=-++. ... ...|. ..++++.+..++.+.+..+.+.+.+|+-.|+| +.+++.+++..+
T Consensus 48 D~~sA~i~e~aGfdai~vs~~~~a~~~l-G~pD~~~vt~~em~~~~~~I~r~~~~~PviaD~d~Gyg-~~~~v~~tv~~l 125 (318)
T 1zlp_A 48 DALSAAVVEKTGFHAAFVSGYSVSAAML-GLPDFGLLTTTEVVEATRRITAAAPNLCVVVDGDTGGG-GPLNVQRFIREL 125 (318)
T ss_dssp SHHHHHHHHHTTCSEEEECHHHHHHHHH-CCCSSSCSCHHHHHHHHHHHHHHSSSSEEEEECTTCSS-SHHHHHHHHHHH
T ss_pred CHHHHHHHHHcCCCEEEECcHHHhhHhc-CCCCCCCCCHHHHHHHHHHHHhhccCCCEEEeCCCCCC-CHHHHHHHHHHH
Confidence 667888899999999988632222 111 11111 35899999999988765447889999999998 899999999999
Q ss_pred HhCCCCEEee
Q 018731 273 RSIDVDILTL 282 (351)
Q Consensus 273 ~~lg~d~i~i 282 (351)
.+.|+.-+.+
T Consensus 126 ~~aGaagv~i 135 (318)
T 1zlp_A 126 ISAGAKGVFL 135 (318)
T ss_dssp HHTTCCEEEE
T ss_pred HHcCCcEEEE
Confidence 9999998887
No 152
>2p0o_A Hypothetical protein DUF871; structural genomics, TIM barrel, PF05 2, protein structure initiative, midwest center for structu genomics; 2.15A {Enterococcus faecalis}
Probab=75.60 E-value=52 Score=30.62 Aligned_cols=81 Identities=16% Similarity=0.058 Sum_probs=47.6
Q ss_pred CchhHHHHHHHHHhCCCcEEEEeccCCCCCCCCcHHHHHHHHHHHHHhCCCcEEEEeecC---CCCCHHHHHHHHHcCCC
Q 018731 132 DPMEPENTAKAIASWGVDYIVLTSVDRDDIPDGGSGHFARTVKAMKKQKPDIMVECLTSD---FRGDLRAVETLVHSGLD 208 (351)
Q Consensus 132 ~~eei~~~~~~~~~~G~~~I~ltgg~~~~l~~~~~~~~~~li~~ik~~~p~i~i~~~~~~---~~~~~e~l~~L~~aG~~ 208 (351)
..++..+.++.+.+.|+++|+-+=..+.+-...-.+.|.++++..++..-++.+.+.... .-.+.+.+..+++.|++
T Consensus 15 ~~~~~~~yi~~a~~~Gf~~IFTSL~~~e~~~~~~~~~~~~l~~~a~~~g~~vi~DIsp~~l~~Lg~s~~dl~~~~~lGi~ 94 (372)
T 2p0o_A 15 ITNDTIIYIKKMKALGFDGIFTSLHIPEDDTSLYRQRLTDLGAIAKAEKMKIMVDISGEALKRAGFSFDELEPLIELGVT 94 (372)
T ss_dssp CCHHHHHHHHHHHHTTCCEEEEEECCC-----CHHHHHHHHHHHHHHHTCEEEEEECHHHHHTTTCBTTBCHHHHHHTCC
T ss_pred CHHHHHHHHHHHHHCCCCEEEccCCccCCChHHHHHHHHHHHHHHHHCCCEEEEECCHHHHHHcCCCHHHHHHHHHcCCC
Confidence 356667788888899999885432222111111246788888888887323333332110 11244566788888999
Q ss_pred eeec
Q 018731 209 VFAH 212 (351)
Q Consensus 209 ~i~~ 212 (351)
.+-+
T Consensus 95 glRL 98 (372)
T 2p0o_A 95 GLRM 98 (372)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 8865
No 153
>3tqv_A Nicotinate-nucleotide pyrophosphorylase; glycosyltransferase, transferase; 2.62A {Francisella tularensis subsp}
Probab=75.55 E-value=6.5 Score=35.39 Aligned_cols=63 Identities=14% Similarity=0.248 Sum_probs=45.9
Q ss_pred HHHHHHHhCCCcEEEEeccCCCCCCCCcHHHHHHHHHHHHHhCCCcEEEEeecCCCCCHHHHHHHHHcCCCeeecch
Q 018731 138 NTAKAIASWGVDYIVLTSVDRDDIPDGGSGHFARTVKAMKKQKPDIMVECLTSDFRGDLRAVETLVHSGLDVFAHNI 214 (351)
Q Consensus 138 ~~~~~~~~~G~~~I~ltgg~~~~l~~~~~~~~~~li~~ik~~~p~i~i~~~~~~~~~~~e~l~~L~~aG~~~i~~~i 214 (351)
++++++.+.|++.|.| +.++ .+.+.+.++.++. .+.+++ .++ ++++.+..+++.|+|.|++|-
T Consensus 209 ~ea~eAl~aGaD~I~L-----Dn~~---~~~l~~av~~~~~---~v~iea--SGG-It~~~i~~~a~tGVD~IsvGa 271 (287)
T 3tqv_A 209 DELNQAIAAKADIVML-----DNFS---GEDIDIAVSIARG---KVALEV--SGN-IDRNSIVAIAKTGVDFISVGA 271 (287)
T ss_dssp HHHHHHHHTTCSEEEE-----ESCC---HHHHHHHHHHHTT---TCEEEE--ESS-CCTTTHHHHHTTTCSEEECSH
T ss_pred HHHHHHHHcCCCEEEE-----cCCC---HHHHHHHHHhhcC---CceEEE--ECC-CCHHHHHHHHHcCCCEEEECh
Confidence 5666667789998888 2233 4677777776653 467776 344 388999999999999998763
No 154
>1gvf_A Tagatose-bisphosphate aldolase AGAY; lyase, zinc.; HET: PGH; 1.45A {Escherichia coli} SCOP: c.1.10.2
Probab=75.48 E-value=39 Score=30.25 Aligned_cols=136 Identities=13% Similarity=0.100 Sum_probs=79.0
Q ss_pred CchhHHHHHHHHHhCCCcEEEEeccCCCCCCCCcHHHHHHHHHHHHHhCCCcEEEEeecCCCCCHHHHHHHHHcCCCeee
Q 018731 132 DPMEPENTAKAIASWGVDYIVLTSVDRDDIPDGGSGHFARTVKAMKKQKPDIMVECLTSDFRGDLRAVETLVHSGLDVFA 211 (351)
Q Consensus 132 ~~eei~~~~~~~~~~G~~~I~ltgg~~~~l~~~~~~~~~~li~~ik~~~p~i~i~~~~~~~~~~~e~l~~L~~aG~~~i~ 211 (351)
..+.+...++.+.+.+..-|.-.+...-.+. +.+.+..+++.+.+.. ++.|.+ .-|.-.+.+.+....++|++++-
T Consensus 27 n~e~~~avl~AAe~~~sPvIlq~s~~~~~y~--g~~~~~~~v~~~a~~~-~VPVal-HlDHg~~~e~i~~ai~~GFtSVM 102 (286)
T 1gvf_A 27 NAETIQAILEVCSEMRSPVILAGTPGTFKHI--ALEEIYALCSAYSTTY-NMPLAL-HLDHHESLDDIRRKVHAGVRSAM 102 (286)
T ss_dssp SHHHHHHHHHHHHHHTCCCEEEECTTHHHHS--CHHHHHHHHHHHHHHT-TSCBEE-EEEEECCHHHHHHHHHTTCCEEE
T ss_pred CHHHHHHHHHHHHHhCCCEEEECChhHHhhc--CHHHHHHHHHHHHHhC-CCcEEE-EcCCCCCHHHHHHHHHcCCCeEE
Confidence 3566667777777777765543332211122 3577888888887754 444432 22222368899999999999886
Q ss_pred cchhchHHHHhhhcCCCCCHHHHHHHHHHHHHhCCCCeEEEee--eeeCCCCH----------HHHHHHHHHHHhCCCCE
Q 018731 212 HNIETVKRLQRIVRDPRAGYEQSLEVLKHAKLSKKGLITKSSI--MLGLGESD----------DDLKEAMADLRSIDVDI 279 (351)
Q Consensus 212 ~~ies~~~~~~~~r~~~~~~~~~l~~i~~~~~~~~Gi~v~~~~--IvGlgEt~----------e~~~~~l~~l~~lg~d~ 279 (351)
+..-..+ + ..+.+...+.++.+++ .|+.|.+-+ +=|- |.. -+-.+..+|++++|+|.
T Consensus 103 iDgS~lp-~-------eeNi~~Tk~vv~~ah~--~gvsVEaElG~vgg~-ed~~~~~~~~~~~T~Peea~~Fv~~TgvD~ 171 (286)
T 1gvf_A 103 IDGSHFP-F-------AENVKLVKSVVDFCHS--QDCSVEAELGRLGGV-EDDMSVDAESAFLTDPQEAKRFVELTGVDS 171 (286)
T ss_dssp ECCTTSC-H-------HHHHHHHHHHHHHHHH--TTCEEEEEESCCC------------CCSSCCHHHHHHHHHHHCCSE
T ss_pred ECCCCCC-H-------HHHHHHHHHHHHHHHH--cCCEEEEEEeeccCc-ccCcccccccccCCCHHHHHHHHHHHCCCE
Confidence 5311110 0 0123334467778888 888766543 3222 210 22456788899999998
Q ss_pred Eee
Q 018731 280 LTL 282 (351)
Q Consensus 280 i~i 282 (351)
+.+
T Consensus 172 LAv 174 (286)
T 1gvf_A 172 LAV 174 (286)
T ss_dssp EEE
T ss_pred EEe
Confidence 776
No 155
>1rvg_A Fructose-1,6-bisphosphate aldolase; class II aldolase, metal-depdendent aldolase, lyase; 2.00A {Thermus aquaticus} SCOP: c.1.10.2 PDB: 1rv8_A 2fjk_A*
Probab=75.37 E-value=42 Score=30.34 Aligned_cols=171 Identities=12% Similarity=0.109 Sum_probs=94.6
Q ss_pred CchhHHHHHHHHHhCCCcEEEEeccCCCCCCCCcHHHHHHHHHHHHHhCCCcEEEEeecCCCCCHHHHHHHHHcCCCeee
Q 018731 132 DPMEPENTAKAIASWGVDYIVLTSVDRDDIPDGGSGHFARTVKAMKKQKPDIMVECLTSDFRGDLRAVETLVHSGLDVFA 211 (351)
Q Consensus 132 ~~eei~~~~~~~~~~G~~~I~ltgg~~~~l~~~~~~~~~~li~~ik~~~p~i~i~~~~~~~~~~~e~l~~L~~aG~~~i~ 211 (351)
..+.+...++.+.+.+..-|.-.+...-.+. +.+.+..+++...+ .++.|.+ .-|.-.+.+.+..-.++|++++-
T Consensus 26 n~e~~~Ail~AAee~~sPvIlq~s~g~~~y~--g~~~~~~~v~~~a~--~~VPVal-HlDHg~~~e~~~~ai~~GFtSVM 100 (305)
T 1rvg_A 26 NMEFLQAVLEAAEEQRSPVILALSEGAMKYG--GRALTLMAVELAKE--ARVPVAV-HLDHGSSYESVLRALRAGFTSVM 100 (305)
T ss_dssp SHHHHHHHHHHHHHTTCCEEEEEEHHHHHHH--HHHHHHHHHHHHHH--CSSCEEE-EEEEECSHHHHHHHHHTTCSEEE
T ss_pred CHHHHHHHHHHHHHhCCCEEEECChhHHhhC--CHHHHHHHHHHHHh--CCCcEEE-ECCCCCCHHHHHHHHHcCCCeee
Confidence 3567777888888888776544332110111 24566777777776 4665543 22222367888889999999986
Q ss_pred cchhchHHHHhhhcCCCCCHHHHHHHHHHHHHhCCCCeEEEee--eeeCCCCH----------HHHHHHHHHHHhCCCCE
Q 018731 212 HNIETVKRLQRIVRDPRAGYEQSLEVLKHAKLSKKGLITKSSI--MLGLGESD----------DDLKEAMADLRSIDVDI 279 (351)
Q Consensus 212 ~~ies~~~~~~~~r~~~~~~~~~l~~i~~~~~~~~Gi~v~~~~--IvGlgEt~----------e~~~~~l~~l~~lg~d~ 279 (351)
+..-..+ + ..+.+...+.++.+++ .|+.|.+-+ +-|. |+. -+-.+..+|++++|+|.
T Consensus 101 iDgS~~p-~-------eENi~~Tk~vv~~ah~--~gvsVEaELG~vgg~-Ed~~~~~~~~~~yT~Peea~~Fv~~TgvD~ 169 (305)
T 1rvg_A 101 IDKSHED-F-------ETNVRETRRVVEAAHA--VGVTVEAELGRLAGI-EEHVAVDEKDALLTNPEEARIFMERTGADY 169 (305)
T ss_dssp ECCTTSC-H-------HHHHHHHHHHHHHHHH--TTCEEEEEESCCCCS-CC------CCTTCCCHHHHHHHHHHHCCSE
T ss_pred eCCCCCC-H-------HHHHHHHHHHHHHHHH--cCCEEEEEEeeccCc-cCCccccccccccCCHHHHHHHHHHHCCCE
Confidence 5311110 0 0123334467778888 888766543 4332 211 23467788889999998
Q ss_pred EeeecccCCCCCccc-ccCCCCHHHHHHHHHHHHhcCcceeccC
Q 018731 280 LTLGQYLQPTPLHLT-VKEYVTPEKFDFWKAYGESIGFRYVASG 322 (351)
Q Consensus 280 i~i~~~l~PTp~~~~-~~~~v~~~e~~~~~~~~~~~G~~~~~~~ 322 (351)
+.+. +=.--..+.+ ....+. +++++++.+.+.+..+.+|
T Consensus 170 LAva-iGt~HG~Yk~~g~p~L~---~~~L~~I~~~~~vpLVlHG 209 (305)
T 1rvg_A 170 LAVA-IGTSHGAYKGKGRPFID---HARLERIARLVPAPLVLHG 209 (305)
T ss_dssp EEEC-SSCCSSSBCSSSSCCCC---HHHHHHHHHHCCSCEEECS
T ss_pred EEEe-cCccccccCCCCCCccC---HHHHHHHHHhcCCCEEEeC
Confidence 7773 2111111210 123344 4445555555666555544
No 156
>3bg3_A Pyruvate carboxylase, mitochondrial; TIM barrel, ATP-binding, biotin, disease mutation, gluconeogenesis, ligase, lipid synthesis, manganese; HET: KCX BTI; 2.80A {Homo sapiens} PDB: 3bg9_A
Probab=75.35 E-value=10 Score=38.76 Aligned_cols=77 Identities=12% Similarity=0.098 Sum_probs=52.6
Q ss_pred CchhHHHHHHHHHhCCCcEEEEeccCCCCCCCCcHHHHHHHHHHHHHhCCCcEEEEe-ecCCCCCHHHHHHHHHcCCCee
Q 018731 132 DPMEPENTAKAIASWGVDYIVLTSVDRDDIPDGGSGHFARTVKAMKKQKPDIMVECL-TSDFRGDLRAVETLVHSGLDVF 210 (351)
Q Consensus 132 ~~eei~~~~~~~~~~G~~~I~ltgg~~~~l~~~~~~~~~~li~~ik~~~p~i~i~~~-~~~~~~~~e~l~~L~~aG~~~i 210 (351)
+++.+.+.++++.+.|+..|.|..-..-.. ...+.++++.+++..|++.|.+- +++.-+--...-.-.++|++.|
T Consensus 259 ~~e~~~~~a~~l~~~Ga~~I~l~DT~G~~~----P~~v~~lV~~lk~~~p~~~I~~H~Hnd~GlAvANslaAveAGa~~V 334 (718)
T 3bg3_A 259 SLQYYMGLAEELVRAGTHILCIKDMAGLLK----PTACTMLVSSLRDRFPDLPLHIHTHDTSGAGVAAMLACAQAGADVV 334 (718)
T ss_dssp CHHHHHHHHHHHHHHTCSEEEEECTTSCCC----HHHHHHHHHHHHHHSTTCCEEEECCCTTSCHHHHHHHHHHTTCSEE
T ss_pred CHHHHHHHHHHHHHcCCCEEEEcCcCCCcC----HHHHHHHHHHHHHhCCCCeEEEEECCCccHHHHHHHHHHHhCCCEE
Confidence 567788899999999999999954332222 37889999999998876555432 2332223334444567999998
Q ss_pred ec
Q 018731 211 AH 212 (351)
Q Consensus 211 ~~ 212 (351)
-.
T Consensus 335 D~ 336 (718)
T 3bg3_A 335 DV 336 (718)
T ss_dssp EE
T ss_pred Ee
Confidence 64
No 157
>2isw_A Putative fructose-1,6-bisphosphate aldolase; class II fructose-1,6-bisphosphate aldolase, glycolytic pathway, giardia lamblia, drug target; HET: PGH; 1.75A {Giardia intestinalis} PDB: 2isv_A* 3ohi_A* 3gay_A* 3gak_A* 3gb6_A*
Probab=75.12 E-value=49 Score=30.14 Aligned_cols=136 Identities=16% Similarity=0.185 Sum_probs=80.9
Q ss_pred CchhHHHHHHHHHhCCCcEEEEec-cCCCCCCCCcHHHHHHHHHHHHHhCCCcEEEEeecCCCCCHHHHHHHHHcCCCee
Q 018731 132 DPMEPENTAKAIASWGVDYIVLTS-VDRDDIPDGGSGHFARTVKAMKKQKPDIMVECLTSDFRGDLRAVETLVHSGLDVF 210 (351)
Q Consensus 132 ~~eei~~~~~~~~~~G~~~I~ltg-g~~~~l~~~~~~~~~~li~~ik~~~p~i~i~~~~~~~~~~~e~l~~L~~aG~~~i 210 (351)
..+.+...++.+.+.+..-|.-.+ |... +. +.+.+..+++...+.++++.|.+ .-|.-.+.+.+....++|++++
T Consensus 27 n~e~~~Ail~AAee~~sPvIlq~s~g~~~-y~--g~~~~~~~v~~aa~~~~~VPVal-HlDHg~~~e~i~~ai~~GFtSV 102 (323)
T 2isw_A 27 NMEQIQGIMKAVVQLKSPVILQCSRGALK-YS--DMIYLKKLCEAALEKHPDIPICI-HLDHGDTLESVKMAIDLGFSSV 102 (323)
T ss_dssp SHHHHHHHHHHHHHTTCCEEEEEEHHHHH-HT--TTHHHHHHHHHHHHHCTTSCEEE-EEEEECSHHHHHHHHHTTCSEE
T ss_pred CHHHHHHHHHHHHHhCCCEEEECChhHHH-hC--CHHHHHHHHHHHHHhcCCCcEEE-ECCCCCCHHHHHHHHHcCCCeE
Confidence 356777788888888877654333 2211 22 24677778877777645665543 2222237889999999999998
Q ss_pred ecchhchHHHHhhhcCCCCCHHHHHHHHHHHHHhCCCCeEEEee--eeeCCCCH-------HHHHHHHHHHHhCCCCEEe
Q 018731 211 AHNIETVKRLQRIVRDPRAGYEQSLEVLKHAKLSKKGLITKSSI--MLGLGESD-------DDLKEAMADLRSIDVDILT 281 (351)
Q Consensus 211 ~~~ies~~~~~~~~r~~~~~~~~~l~~i~~~~~~~~Gi~v~~~~--IvGlgEt~-------e~~~~~l~~l~~lg~d~i~ 281 (351)
-+..-.. ++ ..+.+...+.++.+++ .|+.|.+-+ +-|. |+. -+-.+..+|++++|+|.+.
T Consensus 103 MiDgS~~-p~-------eENi~~Tk~vv~~ah~--~gvsVEaELG~vgg~-Ed~v~~~~~yTdPeea~~Fv~~TgvD~LA 171 (323)
T 2isw_A 103 MIDASHH-PF-------DENVRITKEVVAYAHA--RSVSVEAELGTLGGI-EEDVQNTVQLTEPQDAKKFVELTGVDALA 171 (323)
T ss_dssp EECCTTS-CH-------HHHHHHHHHHHHHHHT--TTCEEEEEESCC-----------CCCCCHHHHHHHHHHHCCSEEE
T ss_pred EecCCCC-CH-------HHHHHHHHHHHHHHHH--cCCeEEEEeCCccCC-ccCcccccccCCHHHHHHHHHHHCCCEEE
Confidence 6531111 00 0123334467778888 888775543 3332 210 2345677888899999877
Q ss_pred e
Q 018731 282 L 282 (351)
Q Consensus 282 i 282 (351)
+
T Consensus 172 v 172 (323)
T 2isw_A 172 V 172 (323)
T ss_dssp E
T ss_pred E
Confidence 7
No 158
>2e6f_A Dihydroorotate dehydrogenase; chagas disease, pyrimidine biosynthesis, fumarate reductase, energy metabolism, redox homeostasis, flavoprotein; HET: FMN OXC; 1.26A {Trypanosoma cruzi} PDB: 2e6a_A* 2e6d_A* 2e68_A* 2djl_A* 2djx_A* 3c3n_A* 2b4g_A* 3c61_A* 3mhu_A* 3mjy_A*
Probab=74.96 E-value=11 Score=33.98 Aligned_cols=83 Identities=16% Similarity=0.079 Sum_probs=52.2
Q ss_pred HHHHHHHHHcCCC---eeecchhchHHHHhhhcCCCCCHHHHHHHHHHHHHhCCCCeEEEeeeeeCCCCHHHHHHHHHHH
Q 018731 196 LRAVETLVHSGLD---VFAHNIETVKRLQRIVRDPRAGYEQSLEVLKHAKLSKKGLITKSSIMLGLGESDDDLKEAMADL 272 (351)
Q Consensus 196 ~e~l~~L~~aG~~---~i~~~ies~~~~~~~~r~~~~~~~~~l~~i~~~~~~~~Gi~v~~~~IvGlgEt~e~~~~~l~~l 272 (351)
.+.++.+.++|+| .|.+|+-+-.. +..+.-+.+.+...+.++.+++.. ++.+..-+ ..+-+.+++.+.++.+
T Consensus 109 ~~~a~~~~~~g~d~~~~iein~~~P~~--~g~~~~g~~~~~~~~ii~~vr~~~-~~Pv~vK~--~~~~~~~~~~~~a~~~ 183 (314)
T 2e6f_A 109 VAMVRRLAPVAQEKGVLLELNLSCPNV--PGKPQVAYDFEAMRTYLQQVSLAY-GLPFGVKM--PPYFDIAHFDTAAAVL 183 (314)
T ss_dssp HHHHHHHHHHHHHHCCEEEEECCCCCS--TTCCCGGGSHHHHHHHHHHHHHHH-CSCEEEEE--CCCCCHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCCcCceEEEEcCCCCC--CCchhhcCCHHHHHHHHHHHHHhc-CCCEEEEE--CCCCCHHHHHHHHHHH
Confidence 3677788888999 78776532111 110101236677777777777621 44433222 2245788888989999
Q ss_pred HhCC-CCEEeee
Q 018731 273 RSID-VDILTLG 283 (351)
Q Consensus 273 ~~lg-~d~i~i~ 283 (351)
.+.| +|.+.+.
T Consensus 184 ~~aG~~d~i~v~ 195 (314)
T 2e6f_A 184 NEFPLVKFVTCV 195 (314)
T ss_dssp HTCTTEEEEEEC
T ss_pred HhcCCceEEEEe
Confidence 9999 9988764
No 159
>1jub_A Dihydroorotate dehydrogenase A; homodimer, alpha-beta barrel, flavoprotein, mutant enzyme, oxidoreductase; HET: FMN; 1.40A {Lactococcus lactis} SCOP: c.1.4.1 PDB: 1ovd_A* 1jue_A* 1dor_A* 2bsl_A* 2bx7_A* 2dor_A* 1jqv_A* 1jrb_A* 1jrc_A* 1jqx_A*
Probab=74.51 E-value=15 Score=32.93 Aligned_cols=84 Identities=7% Similarity=-0.071 Sum_probs=53.2
Q ss_pred HHHHHHHHHcCCC-eeecchhchHHHHhhhcCCCCCHHHHHHHHHHHHHhCCCCeEEEeeeeeCCCCHHHHHHHHHHHHh
Q 018731 196 LRAVETLVHSGLD-VFAHNIETVKRLQRIVRDPRAGYEQSLEVLKHAKLSKKGLITKSSIMLGLGESDDDLKEAMADLRS 274 (351)
Q Consensus 196 ~e~l~~L~~aG~~-~i~~~ies~~~~~~~~r~~~~~~~~~l~~i~~~~~~~~Gi~v~~~~IvGlgEt~e~~~~~l~~l~~ 274 (351)
.+.++.+.++|+| .|.+|+-+... +..+.-+.+.+...+.++.+++. .++.+..-+- .+-+.+++.+.++.+.+
T Consensus 109 ~~~a~~~~~~g~d~~iein~~~P~~--~g~~~~g~~~e~~~~iv~~vr~~-~~~Pv~vKi~--~~~~~~~~~~~a~~~~~ 183 (311)
T 1jub_A 109 IAMLKKIQESDFSGITELNLSCPNV--PGEPQLAYDFEATEKLLKEVFTF-FTKPLGVKLP--PYFDLVHFDIMAEILNQ 183 (311)
T ss_dssp HHHHHHHHHSCCCSEEEEESCCCCS--SSCCCGGGCHHHHHHHHHHHTTT-CCSCEEEEEC--CCCSHHHHHHHHHHHTT
T ss_pred HHHHHHHHhcCCCeEEEEeccCCCC--CCcccccCCHHHHHHHHHHHHHh-cCCCEEEEEC--CCCCHHHHHHHHHHHHH
Confidence 3677788889999 88776532211 10000023677778888888762 1444333222 23477888888999999
Q ss_pred CCCCEEeeec
Q 018731 275 IDVDILTLGQ 284 (351)
Q Consensus 275 lg~d~i~i~~ 284 (351)
.|+|.+.+..
T Consensus 184 ~G~d~i~v~~ 193 (311)
T 1jub_A 184 FPLTYVNSVN 193 (311)
T ss_dssp SCCCEEEECC
T ss_pred cCCcEEEecC
Confidence 9999887743
No 160
>1u83_A Phosphosulfolactate synthase; structural genomics, phosphosulfolactate PSI, protein structure initiative, midwest center for struc genomics; 2.20A {Bacillus subtilis} SCOP: c.1.27.1
Probab=74.50 E-value=31 Score=30.70 Aligned_cols=124 Identities=9% Similarity=0.011 Sum_probs=81.6
Q ss_pred chhHHHHHHHHHhCCCcEEEEeccCCCCCCCCcHHHHHHHHHHHHHhCCCcEEEEeecC---------CCCCHHHHHHHH
Q 018731 133 PMEPENTAKAIASWGVDYIVLTSVDRDDIPDGGSGHFARTVKAMKKQKPDIMVECLTSD---------FRGDLRAVETLV 203 (351)
Q Consensus 133 ~eei~~~~~~~~~~G~~~I~ltgg~~~~l~~~~~~~~~~li~~ik~~~p~i~i~~~~~~---------~~~~~e~l~~L~ 203 (351)
+....+.++.+ ..=++.+-|.+|+...++ + +.+.++..+++ ++.+.. .+ + .-++.++..+
T Consensus 52 ~~~~~DlLe~a-g~yID~lKfg~GTs~l~~----~-l~ekI~l~~~~--gV~v~~--GGTlfE~~l~qg-~~~~yl~~~k 120 (276)
T 1u83_A 52 LQFFKDAIAGA-SDYIDFVKFGWGTSLLTK----D-LEEKISTLKEH--DITFFF--GGTLFEKYVSQK-KVNEFHRYCT 120 (276)
T ss_dssp HHHHHHHHHHH-GGGCCEEEECTTGGGGCT----T-HHHHHHHHHHT--TCEEEE--CHHHHHHHHHTT-CHHHHHHHHH
T ss_pred HHHHHHHHHHh-hhhcceEEecCcchhhhH----H-HHHHHHHHHHc--CCeEeC--CcHHHHHHHHcC-cHHHHHHHHH
Confidence 33444444332 223888999888854333 2 88888888886 555532 11 1 2368999999
Q ss_pred HcCCCeeecchhchHHHHhhhcCCCCCHHHHHHHHHHHHHhCCCCeEEEeeeeeC--C-----CCHHHHHHHHHHHHhCC
Q 018731 204 HSGLDVFAHNIETVKRLQRIVRDPRAGYEQSLEVLKHAKLSKKGLITKSSIMLGL--G-----ESDDDLKEAMADLRSID 276 (351)
Q Consensus 204 ~aG~~~i~~~ies~~~~~~~~r~~~~~~~~~l~~i~~~~~~~~Gi~v~~~~IvGl--g-----Et~e~~~~~l~~l~~lg 276 (351)
+.|++.|-++--+. .-+.+++.+.|+.+++ . +.|.+-+ |- + .+.+++.+.++.-.+.|
T Consensus 121 ~lGF~~IEISdGti----------~l~~~~~~~lI~~a~~--~-f~Vl~Ev--G~K~~~~~~~~~~~~~I~~~~~dLeAG 185 (276)
T 1u83_A 121 YFGCEYIEISNGTL----------PMTNKEKAAYIADFSD--E-FLVLSEV--GSKDAELASRQSSEEWLEYIVEDMEAG 185 (276)
T ss_dssp HTTCSEEEECCSSS----------CCCHHHHHHHHHHHTT--T-SEEEEEC--SCCC------CCSTHHHHHHHHHHHHT
T ss_pred HcCCCEEEECCCcc----------cCCHHHHHHHHHHHHh--h-cEEeeec--cccCccccCCCCHHHHHHHHHHHHHCC
Confidence 99999996652221 3467788888888887 5 7655542 43 2 45677888888888889
Q ss_pred CCEEee
Q 018731 277 VDILTL 282 (351)
Q Consensus 277 ~d~i~i 282 (351)
++.|-+
T Consensus 186 A~~Vii 191 (276)
T 1u83_A 186 AEKVIT 191 (276)
T ss_dssp EEEEEE
T ss_pred CcEEEE
Confidence 888776
No 161
>1z41_A YQJM, probable NADH-dependent flavin oxidoreductase YQJ; FMN, beta-alpha-barrel; HET: FMN; 1.30A {Bacillus subtilis} SCOP: c.1.4.1 PDB: 1z42_A* 1z44_A* 1z48_A*
Probab=74.20 E-value=12 Score=34.35 Aligned_cols=78 Identities=21% Similarity=0.157 Sum_probs=53.2
Q ss_pred CchhHHHHHHHHHhCCCcEEEEeccCCCC--CCCCcHHHHHHHHHHHHHhCCCcEEEEeecCCCCCHHHHHHHHHcC-CC
Q 018731 132 DPMEPENTAKAIASWGVDYIVLTSVDRDD--IPDGGSGHFARTVKAMKKQKPDIMVECLTSDFRGDLRAVETLVHSG-LD 208 (351)
Q Consensus 132 ~~eei~~~~~~~~~~G~~~I~ltgg~~~~--l~~~~~~~~~~li~~ik~~~p~i~i~~~~~~~~~~~e~l~~L~~aG-~~ 208 (351)
+.++..+.++.+.+.|+..|.++++.... .+. +.....++++.+++.. ++.|- ..++..+.+.++.+.+.| +|
T Consensus 227 ~~~~~~~~a~~l~~~Gvd~i~v~~~~~~~~~~~~-~~~~~~~~~~~ir~~~-~iPVi--~~Ggi~s~~~a~~~l~~G~aD 302 (338)
T 1z41_A 227 DIADHIGFAKWMKEQGVDLIDCSSGALVHADINV-FPGYQVSFAEKIREQA-DMATG--AVGMITDGSMAEEILQNGRAD 302 (338)
T ss_dssp CHHHHHHHHHHHHHTTCCEEEEECCCSSCCCCCC-CTTTTHHHHHHHHHHH-CCEEE--ECSSCCSHHHHHHHHHTTSCS
T ss_pred CHHHHHHHHHHHHHcCCCEEEEecCccccCCCCC-CccchHHHHHHHHHHC-CCCEE--EECCCCCHHHHHHHHHcCCce
Confidence 45678888999999999999998764210 111 1122356677777754 44543 355555888888888888 99
Q ss_pred eeecc
Q 018731 209 VFAHN 213 (351)
Q Consensus 209 ~i~~~ 213 (351)
.|.++
T Consensus 303 ~V~iG 307 (338)
T 1z41_A 303 LIFIG 307 (338)
T ss_dssp EEEEC
T ss_pred EEeec
Confidence 99876
No 162
>2cc0_A Acetyl-xylan esterase; hydrolase, carbohydrate esterase; 1.6A {Streptomyces lividans} SCOP: c.6.2.3
Probab=73.86 E-value=17 Score=30.18 Aligned_cols=130 Identities=10% Similarity=0.073 Sum_probs=73.9
Q ss_pred HHHHHHhCCCcEEEEeccCCCCCCCCcH----HHHHHHHHHHHHhCCCcEEEEe-ecCCCCCHHHHHHHHHcCCCeeecc
Q 018731 139 TAKAIASWGVDYIVLTSVDRDDIPDGGS----GHFARTVKAMKKQKPDIMVECL-TSDFRGDLRAVETLVHSGLDVFAHN 213 (351)
Q Consensus 139 ~~~~~~~~G~~~I~ltgg~~~~l~~~~~----~~~~~li~~ik~~~p~i~i~~~-~~~~~~~~e~l~~L~~aG~~~i~~~ 213 (351)
.++++.+.| .+|-.=+-....+..... +.+.+..+.|++.. +.....+ .|.+..++..++.+++.|...+..+
T Consensus 48 ~~~~~~~~G-heIg~Ht~~H~~l~~ls~~~~~~ei~~~~~~l~~~~-G~~~~~fr~P~G~~~~~~~~~~~~~G~~~v~w~ 125 (195)
T 2cc0_A 48 LVRAQVDAG-MWVANHSYTHPHMTQLGQAQMDSEISRTQQAIAGAG-GGTPKLFRPPYGETNATLRSVEAKYGLTEVIWD 125 (195)
T ss_dssp HHHHHHHTT-CEEEECCSSCCCGGGSCHHHHHHHHHHHHHHHHHTT-SCCCSEECCGGGCCCHHHHHHHHHTTCEECCCS
T ss_pred HHHHHHHCC-CEEEcCCCCccccccCCHHHHHHHHHHHHHHHHHHh-CCCCCEEECCCCCcCHHHHHHHHHCCCeEEEec
Confidence 455556677 444432222222322112 23444444454432 3322222 3555568889999999999888777
Q ss_pred hhchHHHHhhhcCCCCCHHHHHHHHHHHHHhCCCCeEEEeeeeeC---CCCHHHHHHHHHHHHhCCCCEEeeecc
Q 018731 214 IETVKRLQRIVRDPRAGYEQSLEVLKHAKLSKKGLITKSSIMLGL---GESDDDLKEAMADLRSIDVDILTLGQY 285 (351)
Q Consensus 214 ies~~~~~~~~r~~~~~~~~~l~~i~~~~~~~~Gi~v~~~~IvGl---gEt~e~~~~~l~~l~~lg~d~i~i~~~ 285 (351)
+++.+-. ..+.+++.+.++.++ +|- +|+-+ ..|.+.+...+..+++.|...+++...
T Consensus 126 ~d~~Dw~-------~~~~~~i~~~~~~~~---~g~-----IiL~Hd~~~~t~~al~~ii~~l~~~Gy~~v~l~~~ 185 (195)
T 2cc0_A 126 VDSQDWN-------NASTDAIVQAVSRLG---NGQ-----VILMHDWPANTLAAIPRIAQTLAGKGLCSGMISPQ 185 (195)
T ss_dssp EECCGGG-------TCCHHHHHHHHHTCC---TTC-----EEEEESSCHHHHHHHHHHHHHHHHTTEEECEECTT
T ss_pred cCCCccC-------CCCHHHHHHHHhCcC---cCe-----EEEECCCchhHHHHHHHHHHHHHHCCCEEEEeCcc
Confidence 7664421 235666666654332 442 33323 246788888999999999888877533
No 163
>2ekc_A AQ_1548, tryptophan synthase alpha chain; structural genomics, lyase, NPPSFA, national project on PROT structural and functional analyses; 2.00A {Aquifex aeolicus}
Probab=73.77 E-value=46 Score=29.14 Aligned_cols=19 Identities=11% Similarity=0.193 Sum_probs=10.2
Q ss_pred CHHHHHHHHHHHHhCCCCE
Q 018731 261 SDDDLKEAMADLRSIDVDI 279 (351)
Q Consensus 261 t~e~~~~~l~~l~~lg~d~ 279 (351)
..++..+..+.+++.|.+.
T Consensus 132 ~~ee~~~~~~~~~~~gl~~ 150 (262)
T 2ekc_A 132 PPEEAEELKAVMKKYVLSF 150 (262)
T ss_dssp CHHHHHHHHHHHHHTTCEE
T ss_pred CHHHHHHHHHHHHHcCCcE
Confidence 3455555555555555543
No 164
>3b0p_A TRNA-dihydrouridine synthase; TIM barrel, oxidoreductase; HET: FMN; 1.70A {Thermus thermophilus} PDB: 3b0u_X* 3b0v_C*
Probab=73.77 E-value=13 Score=34.26 Aligned_cols=77 Identities=13% Similarity=0.037 Sum_probs=51.4
Q ss_pred hhHHHHHHHHHhCCCcEEEEeccCCCC-CCCCc----HHHHHHHHHHHHHhCCCcEEEEeecCCCCCHHHHHHHHHcCCC
Q 018731 134 MEPENTAKAIASWGVDYIVLTSVDRDD-IPDGG----SGHFARTVKAMKKQKPDIMVECLTSDFRGDLRAVETLVHSGLD 208 (351)
Q Consensus 134 eei~~~~~~~~~~G~~~I~ltgg~~~~-l~~~~----~~~~~~li~~ik~~~p~i~i~~~~~~~~~~~e~l~~L~~aG~~ 208 (351)
++..+.++.+.+.|+..|.+.++.... +.... .....++++.+++..|++.|-+ ++++.+.+.+..+.+ |+|
T Consensus 144 ~~~~~~a~~l~~aG~d~I~V~~r~~~~g~~g~~~~~~~~~~~~~i~~ik~~~~~iPVia--nGgI~s~eda~~~l~-GaD 220 (350)
T 3b0p_A 144 RGLAQSVEAMAEAGVKVFVVHARSALLALSTKANREIPPLRHDWVHRLKGDFPQLTFVT--NGGIRSLEEALFHLK-RVD 220 (350)
T ss_dssp HHHHHHHHHHHHTTCCEEEEECSCBC----------CCCCCHHHHHHHHHHCTTSEEEE--ESSCCSHHHHHHHHT-TSS
T ss_pred HHHHHHHHHHHHcCCCEEEEecCchhcccCcccccCCCcccHHHHHHHHHhCCCCeEEE--ECCcCCHHHHHHHHh-CCC
Confidence 466788888899999999998865310 11000 0012467778888766777644 555568887777777 999
Q ss_pred eeecc
Q 018731 209 VFAHN 213 (351)
Q Consensus 209 ~i~~~ 213 (351)
.|.++
T Consensus 221 ~V~iG 225 (350)
T 3b0p_A 221 GVMLG 225 (350)
T ss_dssp EEEEC
T ss_pred EEEEC
Confidence 99876
No 165
>2ekc_A AQ_1548, tryptophan synthase alpha chain; structural genomics, lyase, NPPSFA, national project on PROT structural and functional analyses; 2.00A {Aquifex aeolicus}
Probab=73.45 E-value=47 Score=29.08 Aligned_cols=81 Identities=22% Similarity=0.245 Sum_probs=51.3
Q ss_pred CchhHHHHHHHHHhCCCcEEEEeccCCCCCCCCc---------------HHHHHHHHHHHHHhCCCcEEEEeec-C--CC
Q 018731 132 DPMEPENTAKAIASWGVDYIVLTSVDRDDIPDGG---------------SGHFARTVKAMKKQKPDIMVECLTS-D--FR 193 (351)
Q Consensus 132 ~~eei~~~~~~~~~~G~~~I~ltgg~~~~l~~~~---------------~~~~~~li~~ik~~~p~i~i~~~~~-~--~~ 193 (351)
+.++..+.++.+.+.|++.|-+..-..+.+.|+. .+.+.++++.+++..|++.+-+++. + +.
T Consensus 29 ~~~~~~~~~~~l~~~G~D~IElG~P~sdP~adgp~i~~a~~~al~~G~~~~~~~~~v~~ir~~~~~~Pi~~m~y~n~v~~ 108 (262)
T 2ekc_A 29 DYETSLKAFKEVLKNGTDILEIGFPFSDPVADGPTIQVAHEVALKNGIRFEDVLELSETLRKEFPDIPFLLMTYYNPIFR 108 (262)
T ss_dssp CHHHHHHHHHHHHHTTCSEEEEECCCSCCTTSCHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCTTSCEEEECCHHHHHH
T ss_pred ChHHHHHHHHHHHHcCCCEEEECCCCCCcccccHHHHHHHHHHHHcCCCHHHHHHHHHHHHhhcCCCCEEEEecCcHHHH
Confidence 3466788888999999998888321111121211 2456688999998765666554321 0 00
Q ss_pred -CCHHHHHHHHHcCCCeeec
Q 018731 194 -GDLRAVETLVHSGLDVFAH 212 (351)
Q Consensus 194 -~~~e~l~~L~~aG~~~i~~ 212 (351)
..+..++.++++|++.+.+
T Consensus 109 ~g~~~f~~~~~~aG~dgvii 128 (262)
T 2ekc_A 109 IGLEKFCRLSREKGIDGFIV 128 (262)
T ss_dssp HCHHHHHHHHHHTTCCEEEC
T ss_pred hhHHHHHHHHHHcCCCEEEE
Confidence 1257788999999998765
No 166
>1i60_A IOLI protein; beta barrel, structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 1.60A {Bacillus subtilis} SCOP: c.1.15.4 PDB: 1i6n_A
Probab=73.37 E-value=12 Score=32.31 Aligned_cols=16 Identities=19% Similarity=0.160 Sum_probs=7.9
Q ss_pred HHHHHHHHcCCCeeec
Q 018731 197 RAVETLVHSGLDVFAH 212 (351)
Q Consensus 197 e~l~~L~~aG~~~i~~ 212 (351)
+.++.++++|++.|-+
T Consensus 18 ~~l~~~~~~G~~~vEl 33 (278)
T 1i60_A 18 LDLELCEKHGYDYIEI 33 (278)
T ss_dssp HHHHHHHHTTCSEEEE
T ss_pred HHHHHHHHhCCCEEEE
Confidence 4445555555555444
No 167
>1zfj_A Inosine monophosphate dehydrogenase; IMPDH, CBS domains, oxidoreductase; HET: IMP; 1.90A {Streptococcus pyogenes} SCOP: c.1.5.1 d.37.1.1
Probab=73.11 E-value=67 Score=30.74 Aligned_cols=130 Identities=18% Similarity=0.200 Sum_probs=79.6
Q ss_pred HHHHHHHHHhCCCcEEEEeccCCCCCCCCcHHHHHHHHHHHHHhCCCcEEEEeecCCCCCHHHHHHHHHcCCCeeecchh
Q 018731 136 PENTAKAIASWGVDYIVLTSVDRDDIPDGGSGHFARTVKAMKKQKPDIMVECLTSDFRGDLRAVETLVHSGLDVFAHNIE 215 (351)
Q Consensus 136 i~~~~~~~~~~G~~~I~ltgg~~~~l~~~~~~~~~~li~~ik~~~p~i~i~~~~~~~~~~~e~l~~L~~aG~~~i~~~ie 215 (351)
..+.++.+.+.|+..+++.+... ....+.+.++.+++..|++.+- .+...+.+.+..+.++|++.|.++..
T Consensus 234 ~~~~a~~l~~~G~d~ivi~~a~g------~~~~~~~~i~~l~~~~p~~pvi---~G~v~t~~~a~~~~~~Gad~I~vg~g 304 (491)
T 1zfj_A 234 TFERAEALFEAGADAIVIDTAHG------HSAGVLRKIAEIRAHFPNRTLI---AGNIATAEGARALYDAGVDVVKVGIG 304 (491)
T ss_dssp HHHHHHHHHHHTCSEEEECCSCT------TCHHHHHHHHHHHHHCSSSCEE---EEEECSHHHHHHHHHTTCSEEEECSS
T ss_pred HHHHHHHHHHcCCCeEEEeeecC------cchhHHHHHHHHHHHCCCCcEe---CCCccCHHHHHHHHHcCCCEEEECcc
Confidence 35667777788999998866322 1256778899999887765543 22234788999999999999977642
Q ss_pred c----hHHHHhhhcCCCCCHHHHHHHHHHHHHhCCCCeEEEeeee-eCCCCHHHHHHHHHHHHhCCCCEEeeeccc
Q 018731 216 T----VKRLQRIVRDPRAGYEQSLEVLKHAKLSKKGLITKSSIML-GLGESDDDLKEAMADLRSIDVDILTLGQYL 286 (351)
Q Consensus 216 s----~~~~~~~~r~~~~~~~~~l~~i~~~~~~~~Gi~v~~~~Iv-GlgEt~e~~~~~l~~l~~lg~d~i~i~~~l 286 (351)
. ..+...... ..+.+-..+..+.+.+ .++.+ |. |=-.+.+|+.+.+ .+|++.+.++..+
T Consensus 305 ~g~~~~tr~~~~~~--~p~~~~l~~~~~~~~~--~~ipv----ia~GGi~~~~di~kal----~~GA~~v~vG~~~ 368 (491)
T 1zfj_A 305 PGSICTTRVVAGVG--VPQVTAIYDAAAVARE--YGKTI----IADGGIKYSGDIVKAL----AAGGNAVMLGSMF 368 (491)
T ss_dssp CCTTBCHHHHTCCC--CCHHHHHHHHHHHHHH--TTCEE----EEESCCCSHHHHHHHH----HTTCSEEEESTTT
T ss_pred CCcceEEeeecCCC--CCcHHHHHHHHHHHhh--cCCCE----EeeCCCCCHHHHHHHH----HcCCcceeeCHHh
Confidence 1 122221111 2234444444444444 56653 33 2125677777665 4799998886443
No 168
>3k13_A 5-methyltetrahydrofolate-homocysteine methyltrans; 5-methyltetrahydrofolate,methyltransferase, TIM barrel, STRU genomics, PSI-2; HET: MSE THH GOL; 2.00A {Bacteroides thetaiotaomicron}
Probab=73.07 E-value=36 Score=30.74 Aligned_cols=125 Identities=14% Similarity=0.065 Sum_probs=70.5
Q ss_pred CCchhHHHHHHHHHhCCCcEEEEeccCCCCCCCCcHHHHHHHHHHHH---HhCCCcEEEEeecCCCCCHHHHHHHHH--c
Q 018731 131 PDPMEPENTAKAIASWGVDYIVLTSVDRDDIPDGGSGHFARTVKAMK---KQKPDIMVECLTSDFRGDLRAVETLVH--S 205 (351)
Q Consensus 131 ~~~eei~~~~~~~~~~G~~~I~ltgg~~~~l~~~~~~~~~~li~~ik---~~~p~i~i~~~~~~~~~~~e~l~~L~~--a 205 (351)
.+.+.+.+.+++..+.|.+-|-+.+|... .. ..+.+.+++..|. +. .++.|.+=| .+.+.++.-.+ +
T Consensus 34 ~~~~~a~~~A~~~v~~GAdiIDIg~g~~~-v~--~~eem~rvv~~i~~~~~~-~~vpisIDT----~~~~V~eaaL~~~~ 105 (300)
T 3k13_A 34 KKYDEALSIARQQVEDGALVIDVNMDDGL-LD--ARTEMTTFLNLIMSEPEI-ARVPVMIDS----SKWEVIEAGLKCLQ 105 (300)
T ss_dssp TCHHHHHHHHHHHHHTTCSEEEEECCCTT-SC--HHHHHHHHHHHHHTCHHH-HTSCEEEEC----SCHHHHHHHHHHCS
T ss_pred CCHHHHHHHHHHHHHCCCCEEEECCCCCC-CC--HHHHHHHHHHHHHHhhhc-CCCeEEEeC----CCHHHHHHHHHhcC
Confidence 45678889999999999999999876542 32 2345555555554 32 244444322 26788888777 7
Q ss_pred CCCeee-cchhchHHHHhhhcCCCCCHHHHHHHHHHHHHhCCCCeEEEeee--eeCCCCHHHHHHHHH----HH-HhCCC
Q 018731 206 GLDVFA-HNIETVKRLQRIVRDPRAGYEQSLEVLKHAKLSKKGLITKSSIM--LGLGESDDDLKEAMA----DL-RSIDV 277 (351)
Q Consensus 206 G~~~i~-~~ies~~~~~~~~r~~~~~~~~~l~~i~~~~~~~~Gi~v~~~~I--vGlgEt~e~~~~~l~----~l-~~lg~ 277 (351)
|.+.|+ ++.+.. -+.+.+.+..+++ .|..+...-+ -|..+|.++..+..+ .+ .+.|+
T Consensus 106 Ga~iINdIs~~~~-------------d~~~~~~~~l~a~--~ga~vV~mh~d~~G~p~t~~~~~~i~~r~~~~~~~~~Gi 170 (300)
T 3k13_A 106 GKSIVNSISLKEG-------------EEVFLEHARIIKQ--YGAATVVMAFDEKGQADTAARKIEVCERAYRLLVDKVGF 170 (300)
T ss_dssp SCCEEEEECSTTC-------------HHHHHHHHHHHHH--HTCEEEEESEETTEECCSHHHHHHHHHHHHHHHHHHTCC
T ss_pred CCCEEEeCCcccC-------------ChhHHHHHHHHHH--hCCeEEEEeeCCCCCCCCHHHHHHHHHHHHHHHHHHcCC
Confidence 887663 221111 1122234445555 6665444333 355566665433332 22 56677
Q ss_pred C
Q 018731 278 D 278 (351)
Q Consensus 278 d 278 (351)
+
T Consensus 171 ~ 171 (300)
T 3k13_A 171 N 171 (300)
T ss_dssp C
T ss_pred C
Confidence 3
No 169
>1m5w_A Pyridoxal phosphate biosynthetic protein PDXJ; TIM barrel, protein-substrate complex, multi-binding states; HET: DXP; 1.96A {Escherichia coli} SCOP: c.1.24.1 PDB: 1ho1_A 1ho4_A* 1ixn_A* 1ixo_A* 1ixp_A 1ixq_A 3f4n_A*
Probab=72.97 E-value=47 Score=28.89 Aligned_cols=128 Identities=12% Similarity=0.073 Sum_probs=77.9
Q ss_pred HHHHHHHHHhCCCcEEEEeccCCCCCCCCcHHHHHHHHHHHHHhCCCcEEEEeecCCCCCHHHHHHHHHcCCCeeecchh
Q 018731 136 PENTAKAIASWGVDYIVLTSVDRDDIPDGGSGHFARTVKAMKKQKPDIMVECLTSDFRGDLRAVETLVHSGLDVFAHNIE 215 (351)
Q Consensus 136 i~~~~~~~~~~G~~~I~ltgg~~~~l~~~~~~~~~~li~~ik~~~p~i~i~~~~~~~~~~~e~l~~L~~aG~~~i~~~ie 215 (351)
+.+.+......|.+.|.+== ++|-..-...++..+-+.++ -.+++++.. ++|+++...+...+.+++-.|
T Consensus 27 pv~aA~~ae~aGAdgITvHl--ReDrRHI~d~Dv~~L~~~~~---~~lNlE~a~-----t~emi~ia~~~kP~~vtLVPE 96 (243)
T 1m5w_A 27 PVQAAFIAEQAGADGITVHL--REDRRHITDRDVRILRQTLD---TRMNLEMAV-----TEEMLAIAVETKPHFCCLVPE 96 (243)
T ss_dssp HHHHHHHHHTTTCSEEEEEC--CTTCSSSCHHHHHHHHHHCS---SEEEEEECS-----SHHHHHHHHHHCCSEEEECCC
T ss_pred HHHHHHHHHHcCCCEEEeCC--CCCcccCCHHHHHHHHHhcC---CCEEeccCC-----CHHHHHHHHHcCCCEEEECCC
Confidence 34455555678999887721 11111111234433332221 135677632 789999999999999998777
Q ss_pred chHHHH-hhhcCCCCCHHHHHHHHHHHHHhCCCCeEEEeeeeeCCCCHHHHHHHHHHHHhCCCCEEeee
Q 018731 216 TVKRLQ-RIVRDPRAGYEQSLEVLKHAKLSKKGLITKSSIMLGLGESDDDLKEAMADLRSIDVDILTLG 283 (351)
Q Consensus 216 s~~~~~-~~~r~~~~~~~~~l~~i~~~~~~~~Gi~v~~~~IvGlgEt~e~~~~~l~~l~~lg~d~i~i~ 283 (351)
.-+++. ..--+-....+.....++.+++ .||.|+..+ .-.. +.++...++|.+.|-++
T Consensus 97 ~r~e~TTegGldv~~~~~~l~~~i~~L~~--~GIrVSLFI----Dpd~----~qi~aA~~~GA~~IELh 155 (243)
T 1m5w_A 97 KRQEVTTEGGLDVAGQRDKMRDACKRLAD--AGIQVSLFI----DADE----EQIKAAAEVGAPFIEIH 155 (243)
T ss_dssp CSSCSSCCSCCCSGGGHHHHHHHHHHHHH--TTCEEEEEE----CSCH----HHHHHHHHTTCSEEEEE
T ss_pred CCCCcCCCcchhHHhhHHHHHHHHHHHHH--CCCEEEEEe----CCCH----HHHHHHHHhCcCEEEEe
Confidence 654431 1000112356777888999999 999876543 2223 44566788999999985
No 170
>1h5y_A HISF; histidine biosynthesis, TIM-barrel; 2.0A {Pyrobaculum aerophilum} SCOP: c.1.2.1
Probab=72.86 E-value=24 Score=30.09 Aligned_cols=97 Identities=21% Similarity=0.182 Sum_probs=57.7
Q ss_pred hHHHHHHHHHhCCCcEEEEeccCCCCCCCCcHHHHHHHHHHHHHhCCCcEEEEeecCCCCCHHHHHHHHHcCCCeeecch
Q 018731 135 EPENTAKAIASWGVDYIVLTSVDRDDIPDGGSGHFARTVKAMKKQKPDIMVECLTSDFRGDLRAVETLVHSGLDVFAHNI 214 (351)
Q Consensus 135 ei~~~~~~~~~~G~~~I~ltgg~~~~l~~~~~~~~~~li~~ik~~~p~i~i~~~~~~~~~~~e~l~~L~~aG~~~i~~~i 214 (351)
...+.++.+.+.|+..|.+++.+++.... +. -.+.++.+++.. ++.+-+ .++..+.+.+..+.++|++.+.++
T Consensus 155 ~~~e~~~~~~~~G~d~i~~~~~~~~g~~~-~~--~~~~i~~l~~~~-~~pvia--~GGi~~~~~~~~~~~~Ga~~v~vg- 227 (253)
T 1h5y_A 155 DAVKWAKEVEELGAGEILLTSIDRDGTGL-GY--DVELIRRVADSV-RIPVIA--SGGAGRVEHFYEAAAAGADAVLAA- 227 (253)
T ss_dssp EHHHHHHHHHHHTCSEEEEEETTTTTTCS-CC--CHHHHHHHHHHC-SSCEEE--ESCCCSHHHHHHHHHTTCSEEEES-
T ss_pred CHHHHHHHHHhCCCCEEEEecccCCCCcC-cC--CHHHHHHHHHhc-CCCEEE--eCCCCCHHHHHHHHHcCCcHHHHH-
Confidence 44566777778899999998765422211 11 134455666543 455543 455556678888889999998775
Q ss_pred hchHHHHhhhcCCCCCHHHHHHHHHHHHHhCCCCeE
Q 018731 215 ETVKRLQRIVRDPRAGYEQSLEVLKHAKLSKKGLIT 250 (351)
Q Consensus 215 es~~~~~~~~r~~~~~~~~~l~~i~~~~~~~~Gi~v 250 (351)
+.+++ ...+.++..+. +++ .|+.+
T Consensus 228 ---sal~~----~~~~~~~~~~~---l~~--~g~~~ 251 (253)
T 1h5y_A 228 ---SLFHF----RVLSIAQVKRY---LKE--RGVEV 251 (253)
T ss_dssp ---HHHHT----TSSCHHHHHHH---HHH--TTCBC
T ss_pred ---HHHHc----CCCCHHHHHHH---HHH--cCCCC
Confidence 23332 13456555554 445 67754
No 171
>2ze3_A DFA0005; organic waste LEFT-OVER decomposition, alkaliphilic, ICL/PEPM superfamily, alpha-ketoglutarate LIG isomerase; HET: AKG; 1.65A {Deinococcus ficus}
Probab=72.51 E-value=17 Score=32.50 Aligned_cols=86 Identities=13% Similarity=0.204 Sum_probs=66.9
Q ss_pred CHHHHHHHHHcCCCeeecchhchHHHHhhhcCC-CCCHHHHHHHHHHHHHhCCCCeEEEeeeeeCCCCHHHHHHHHHHHH
Q 018731 195 DLRAVETLVHSGLDVFAHNIETVKRLQRIVRDP-RAGYEQSLEVLKHAKLSKKGLITKSSIMLGLGESDDDLKEAMADLR 273 (351)
Q Consensus 195 ~~e~l~~L~~aG~~~i~~~ies~~~~~~~~r~~-~~~~~~~l~~i~~~~~~~~Gi~v~~~~IvGlgEt~e~~~~~l~~l~ 273 (351)
|.-....+.++|++.+.++=.++... ....+. ..++++.+..++.+.+. ..+.+.+|+-.|+|.+.+++.+++..+.
T Consensus 25 D~~sA~~~~~aG~~ai~vsg~s~a~~-~G~pD~~~vt~~em~~~~~~I~~~-~~~pviaD~d~Gyg~~~~~~~~~v~~l~ 102 (275)
T 2ze3_A 25 DVASARLLEAAGFTAIGTTSAGIAHA-RGRTDGQTLTRDEMGREVEAIVRA-VAIPVNADIEAGYGHAPEDVRRTVEHFA 102 (275)
T ss_dssp SHHHHHHHHHHTCSCEEECHHHHHHH-SCCCSSSSSCHHHHHHHHHHHHHH-CSSCEEEECTTCSSSSHHHHHHHHHHHH
T ss_pred CHHHHHHHHHcCCCEEEECcHHHHHh-CCCCCCCCCCHHHHHHHHHHHHhh-cCCCEEeecCCCCCCCHHHHHHHHHHHH
Confidence 67788888999999998874333222 111111 35899999999988754 3578999999999999999999999999
Q ss_pred hCCCCEEee
Q 018731 274 SIDVDILTL 282 (351)
Q Consensus 274 ~lg~d~i~i 282 (351)
+.|+.-+.+
T Consensus 103 ~aGaagv~i 111 (275)
T 2ze3_A 103 ALGVAGVNL 111 (275)
T ss_dssp HTTCSEEEE
T ss_pred HcCCcEEEE
Confidence 999998887
No 172
>1f6y_A 5-methyltetrahydrofolate corrinoid/iron sulfur PR methyltransferase; carbon dioxide fixation, cobalamin, methyltatrahydrofolate; 2.20A {Moorella thermoacetica} SCOP: c.1.21.2 PDB: 2e7f_A* 4djd_A* 4dje_A* 4djf_A* 2ogy_A*
Probab=71.89 E-value=52 Score=28.93 Aligned_cols=134 Identities=13% Similarity=0.147 Sum_probs=79.6
Q ss_pred CCchhHHHHHHHHHhCCCcEEEEeccCCCCCCCCcHHHHHHHHHHHHHhCCCcEEEEeecCCCCCHHHHHHHHHc--CCC
Q 018731 131 PDPMEPENTAKAIASWGVDYIVLTSVDRDDIPDGGSGHFARTVKAMKKQKPDIMVECLTSDFRGDLRAVETLVHS--GLD 208 (351)
Q Consensus 131 ~~~eei~~~~~~~~~~G~~~I~ltgg~~~~l~~~~~~~~~~li~~ik~~~p~i~i~~~~~~~~~~~e~l~~L~~a--G~~ 208 (351)
.+.+.+.+.+++..+.|..-|-+.||... .. ..+.+.+++..+++. .++.+.+=| .+.+.++.-.++ |.+
T Consensus 22 ~~~~~a~~~a~~~v~~GAdiIDIg~g~~~-v~--~~ee~~rvv~~i~~~-~~~pisIDT----~~~~v~~aAl~a~~Ga~ 93 (262)
T 1f6y_A 22 RDPAPVQEWARRQEEGGARALDLNVGPAV-QD--KVSAMEWLVEVTQEV-SNLTLCLDS----TNIKAIEAGLKKCKNRA 93 (262)
T ss_dssp TCHHHHHHHHHHHHHHTCSEEEEBCC-----C--HHHHHHHHHHHHHTT-CCSEEEEEC----SCHHHHHHHHHHCSSCE
T ss_pred CCHHHHHHHHHHHHHCCCcEEEECCCCCC-CC--hHHHHHHHHHHHHHh-CCCeEEEeC----CCHHHHHHHHhhCCCCC
Confidence 35677888888888999999999876431 22 357788888888875 366665422 277888888888 888
Q ss_pred eee-cchh--chHHHHhh------------h--cCCCCCHHHH----HHHHHHHHHhCCCCe---EEEeeeee-CCCCHH
Q 018731 209 VFA-HNIE--TVKRLQRI------------V--RDPRAGYEQS----LEVLKHAKLSKKGLI---TKSSIMLG-LGESDD 263 (351)
Q Consensus 209 ~i~-~~ie--s~~~~~~~------------~--r~~~~~~~~~----l~~i~~~~~~~~Gi~---v~~~~IvG-lgEt~e 263 (351)
-|+ ++.+ ..+++... + ++...++++. .+.++.+.+ .|+. +-.|-.+| +|-+.+
T Consensus 94 iINdvs~~~d~~~~~~~~~a~~~~~vvlmh~~~~G~p~t~~~~~~~~~~~~~~a~~--~Gi~~~~IilDPg~g~~g~~~~ 171 (262)
T 1f6y_A 94 MINSTNAEREKVEKLFPLAVEHGAALIGLTMNKTGIPKDSDTRLAFAMELVAAADE--FGLPMEDLYIDPLILPANVAQD 171 (262)
T ss_dssp EEEEECSCHHHHHHHHHHHHHTTCEEEEESCCSSCSCSSHHHHHHHHHHHHHHHHH--HTCCGGGEEEECCCCCTTTCTT
T ss_pred EEEECCCCcccHHHHHHHHHHhCCcEEEEcCCCCCCCCCHHHHHHHHHHHHHHHHH--CCCCcccEEEeCCCCcCCCChH
Confidence 775 4322 11122111 0 0111244444 344555666 7884 66666666 455444
Q ss_pred ---HHHHHHHHHHh
Q 018731 264 ---DLKEAMADLRS 274 (351)
Q Consensus 264 ---~~~~~l~~l~~ 274 (351)
+..+.+..+++
T Consensus 172 ~~~~~l~~l~~l~~ 185 (262)
T 1f6y_A 172 HAPEVLKTLQQIKM 185 (262)
T ss_dssp HHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHH
Confidence 55556666665
No 173
>3q94_A Fructose-bisphosphate aldolase, class II; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta barrel; HET: 13P; 2.30A {Bacillus anthracis} SCOP: c.1.10.0
Probab=71.62 E-value=56 Score=29.24 Aligned_cols=136 Identities=13% Similarity=0.094 Sum_probs=80.5
Q ss_pred CchhHHHHHHHHHhCCCcEEEEec-cCCCCCCCCcHHHHHHHHHHHHHh-CCCcEEEEeecCCCCCHHHHHHHHHcCCCe
Q 018731 132 DPMEPENTAKAIASWGVDYIVLTS-VDRDDIPDGGSGHFARTVKAMKKQ-KPDIMVECLTSDFRGDLRAVETLVHSGLDV 209 (351)
Q Consensus 132 ~~eei~~~~~~~~~~G~~~I~ltg-g~~~~l~~~~~~~~~~li~~ik~~-~p~i~i~~~~~~~~~~~e~l~~L~~aG~~~ 209 (351)
..+.+...++.+.+.+..-|.-.+ +... +. .+.+.+..+++.+.+. ..++.|.+ .-|.-.+.+.+....++|+++
T Consensus 30 n~e~~~avi~AAee~~sPvIlq~s~~~~~-~~-~g~~~~~~~v~~~A~~~~~~VPVal-HlDHg~~~e~i~~ai~~GFtS 106 (288)
T 3q94_A 30 NLEWTQAILAAAEEEKSPVILGVSEGAAR-HM-TGFKTVVAMVKALIEEMNITVPVAI-HLDHGSSFEKCKEAIDAGFTS 106 (288)
T ss_dssp SHHHHHHHHHHHHHTTCCEEEEEEHHHHH-HT-SCHHHHHHHHHHHHHHTTCCSCEEE-EEEEECSHHHHHHHHHHTCSE
T ss_pred CHHHHHHHHHHHHHhCCCEEEECChhhhh-hc-CCHHHHHHHHHHHHHhcCCCCcEEE-ECCCCCCHHHHHHHHHcCCCe
Confidence 356677778888888877664333 2211 10 1346677888777661 23555533 222223788999999999999
Q ss_pred eecch--hchHHHHhhhcCCCCCHHHHHHHHHHHHHhCCCCeEEEe--eeeeCCC-------CHHHHHHHHHHHHhCCCC
Q 018731 210 FAHNI--ETVKRLQRIVRDPRAGYEQSLEVLKHAKLSKKGLITKSS--IMLGLGE-------SDDDLKEAMADLRSIDVD 278 (351)
Q Consensus 210 i~~~i--es~~~~~~~~r~~~~~~~~~l~~i~~~~~~~~Gi~v~~~--~IvGlgE-------t~e~~~~~l~~l~~lg~d 278 (351)
+-+.. ..+++ +.+...+.++.+++ .|+.|.+- .+=|-.+ ..-+-.+..+|++++|+|
T Consensus 107 VMiDgS~~p~ee----------Ni~~Tk~vv~~ah~--~gvsVEaElG~vgG~Ed~~~~~~~~yT~Peea~~Fv~~TgvD 174 (288)
T 3q94_A 107 VMIDASHHPFEE----------NVETTKKVVEYAHA--RNVSVEAELGTVGGQEDDVIAEGVIYADPAECKHLVEATGID 174 (288)
T ss_dssp EEECCTTSCHHH----------HHHHHHHHHHHHHT--TTCEEEEEESBCBCSCSSCGGGGCBCCCHHHHHHHHHHHCCS
T ss_pred EEEeCCCCCHHH----------HHHHHHHHHHHHHH--cCCeEEEEeeeeccccCCcCCccccCCCHHHHHHHHHHHCCC
Confidence 86531 11111 22333467778888 88877654 3333210 112346677888899999
Q ss_pred EEee
Q 018731 279 ILTL 282 (351)
Q Consensus 279 ~i~i 282 (351)
.+.+
T Consensus 175 ~LAv 178 (288)
T 3q94_A 175 CLAP 178 (288)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 8776
No 174
>2hmc_A AGR_L_411P, dihydrodipicolinate synthase; alpha-beta barrel (TIM barrel), structural genomics, PSI-2, structure initiative; HET: MSE; 1.90A {Agrobacterium tumefaciens str}
Probab=71.54 E-value=49 Score=30.38 Aligned_cols=44 Identities=11% Similarity=-0.073 Sum_probs=22.8
Q ss_pred CCHHHHHHHHHHHHHhCCCCe-EEEeeeeeCC-CCHHHHHHHHHHHHh
Q 018731 229 AGYEQSLEVLKHAKLSKKGLI-TKSSIMLGLG-ESDDDLKEAMADLRS 274 (351)
Q Consensus 229 ~~~~~~l~~i~~~~~~~~Gi~-v~~~~IvGlg-Et~e~~~~~l~~l~~ 274 (351)
.+.++.++..+.+.+ .|.. +-..-.+-.. -+.+++.+.++.+.+
T Consensus 102 ~st~eai~la~~A~~--~Gadavlv~~P~y~~~~s~~~l~~~f~~IA~ 147 (344)
T 2hmc_A 102 VNTASAVAHAVHAQK--VGAKGLMVIPRVLSRGSVIAAQKAHFKAILS 147 (344)
T ss_dssp SSHHHHHHHHHHHHH--HTCSEEEECCCCSSSTTCHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHh--cCCCEEEECCCccCCCCCHHHHHHHHHHHHh
Confidence 356666666666666 5554 1111111113 466666666666655
No 175
>3p6l_A Sugar phosphate isomerase/epimerase; TIM barrel, structural genomics, joint center for structural genomics, JCSG; HET: CIT; 1.85A {Parabacteroides distasonis}
Probab=71.41 E-value=23 Score=30.41 Aligned_cols=118 Identities=13% Similarity=0.129 Sum_probs=73.8
Q ss_pred CcEEEEeecCCC--CCHHHHHHHHHcCCCeeecchhchH-HHH-hhh-cCCCCCHHHHHHHHHHHHHhCCCCeEEEeeee
Q 018731 182 DIMVECLTSDFR--GDLRAVETLVHSGLDVFAHNIETVK-RLQ-RIV-RDPRAGYEQSLEVLKHAKLSKKGLITKSSIML 256 (351)
Q Consensus 182 ~i~i~~~~~~~~--~~~e~l~~L~~aG~~~i~~~ies~~-~~~-~~~-r~~~~~~~~~l~~i~~~~~~~~Gi~v~~~~Iv 256 (351)
++.+.+.+-.+. .-++.++.++++|++.|-+...... .-+ ... . ...+.++.-+.-+.+.+ .|+.+.+.-..
T Consensus 9 ~mklg~~~~~~~~~~~~~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~--~gl~i~~~~~~ 85 (262)
T 3p6l_A 9 GWRLGMQSYSFHLFPLTEALDKTQELGLKYIEIYPGHKLGGKWGDKVFD-FNLDAQTQKEIKELAAS--KGIKIVGTGVY 85 (262)
T ss_dssp TEEEEEEGGGGTTSCHHHHHHHHHHTTCCEEEECTTEECCGGGTTCEES-TTCCHHHHHHHHHHHHH--TTCEEEEEEEE
T ss_pred CcEEEEEecccCCCCHHHHHHHHHHcCCCEEeecCCccccccccccccc-ccCCHHHHHHHHHHHHH--cCCeEEEEecc
Confidence 456655443221 1368999999999999977543210 000 000 1 12355555566666777 89986544332
Q ss_pred eCCCCHHHHHHHHHHHHhCCCCEEeeecccCCCCCcccccCCCCHHHHHHHHHHHHhcCcce
Q 018731 257 GLGESDDDLKEAMADLRSIDVDILTLGQYLQPTPLHLTVKEYVTPEKFDFWKAYGESIGFRY 318 (351)
Q Consensus 257 GlgEt~e~~~~~l~~l~~lg~d~i~i~~~l~PTp~~~~~~~~v~~~e~~~~~~~~~~~G~~~ 318 (351)
...+.+++.+.++.+.++|+..+.+. |. .+.+.++.+++++.|...
T Consensus 86 -~~~~~~~~~~~i~~A~~lGa~~v~~~----~~-----------~~~~~~l~~~a~~~gv~l 131 (262)
T 3p6l_A 86 -VAEKSSDWEKMFKFAKAMDLEFITCE----PA-----------LSDWDLVEKLSKQYNIKI 131 (262)
T ss_dssp -CCSSTTHHHHHHHHHHHTTCSEEEEC----CC-----------GGGHHHHHHHHHHHTCEE
T ss_pred -CCccHHHHHHHHHHHHHcCCCEEEec----CC-----------HHHHHHHHHHHHHhCCEE
Confidence 35677889999999999999998883 21 134566677777777653
No 176
>2hjp_A Phosphonopyruvate hydrolase; phosporus-Ca cleavage, PEP mutase/isocitrate lyase superfamily; HET: XYS PPR; 1.90A {Variovorax SP} PDB: 2dua_A* 2hrw_A
Probab=71.01 E-value=54 Score=29.34 Aligned_cols=85 Identities=9% Similarity=0.098 Sum_probs=64.9
Q ss_pred CHHHHHHHHHcCCCeeecchhchHHHHhhhcCC-CCCHHHHHHHHHHHHHhCCCCeEEEeeeeeCCCCHHHHHHHHHHHH
Q 018731 195 DLRAVETLVHSGLDVFAHNIETVKRLQRIVRDP-RAGYEQSLEVLKHAKLSKKGLITKSSIMLGLGESDDDLKEAMADLR 273 (351)
Q Consensus 195 ~~e~l~~L~~aG~~~i~~~ies~~~~~~~~r~~-~~~~~~~l~~i~~~~~~~~Gi~v~~~~IvGlgEt~e~~~~~l~~l~ 273 (351)
|.-....+.++|++.+.++=-++... ....+. ..++++.+..++.+.+. ..+.+.+|+-.|+| +.+++.+++..+.
T Consensus 24 D~~sA~~~~~aG~~ai~vs~~~~a~~-~G~pD~~~vt~~em~~~~~~I~~~-~~~PviaD~d~Gyg-~~~~~~~~v~~l~ 100 (290)
T 2hjp_A 24 NPLVAKLAEQAGFGGIWGSGFELSAS-YAVPDANILSMSTHLEMMRAIAST-VSIPLIADIDTGFG-NAVNVHYVVPQYE 100 (290)
T ss_dssp SHHHHHHHHHHTCSEEEECHHHHHHH-TTSCTTTCSCHHHHHHHHHHHHTT-CSSCEEEECTTTTS-SHHHHHHHHHHHH
T ss_pred CHHHHHHHHHcCCCEEEEChHHHHHh-CCCCCCCCCCHHHHHHHHHHHHhc-CCCCEEEECCCCCC-CHHHHHHHHHHHH
Confidence 77788888999999998873332221 111111 35899999999988753 35678899999988 8999999999999
Q ss_pred hCCCCEEee
Q 018731 274 SIDVDILTL 282 (351)
Q Consensus 274 ~lg~d~i~i 282 (351)
+.|+.-+.+
T Consensus 101 ~aGa~gv~i 109 (290)
T 2hjp_A 101 AAGASAIVM 109 (290)
T ss_dssp HHTCSEEEE
T ss_pred HhCCeEEEE
Confidence 999998887
No 177
>2nx9_A Oxaloacetate decarboxylase 2, subunit alpha; carboxyltransferase structure, B enzymes, Zn2+ binding site, TIM-barrel fold, lyase; 1.70A {Vibrio cholerae}
Probab=70.76 E-value=22 Score=34.29 Aligned_cols=78 Identities=21% Similarity=0.142 Sum_probs=51.9
Q ss_pred CchhHHHHHHHHHhCCCcEEEEeccCCCCCCCCcHHHHHHHHHHHHHhCCCcEEEEe-ecCCCCCHHHHHHHHHcCCCee
Q 018731 132 DPMEPENTAKAIASWGVDYIVLTSVDRDDIPDGGSGHFARTVKAMKKQKPDIMVECL-TSDFRGDLRAVETLVHSGLDVF 210 (351)
Q Consensus 132 ~~eei~~~~~~~~~~G~~~I~ltgg~~~~l~~~~~~~~~~li~~ik~~~p~i~i~~~-~~~~~~~~e~l~~L~~aG~~~i 210 (351)
+++.+.+.++++.+.|++.|.|-.-..-.. ...+.++++.+++.. ++.|.+- +++.-+--...-.-.++|++.|
T Consensus 156 ~~e~~~~~a~~l~~~Gad~I~l~DT~G~~~----P~~v~~lv~~l~~~~-~~~i~~H~Hnd~GlAvAN~laAv~AGa~~V 230 (464)
T 2nx9_A 156 NLQTWVDVAQQLAELGVDSIALKDMAGILT----PYAAEELVSTLKKQV-DVELHLHCHSTAGLADMTLLKAIEAGVDRV 230 (464)
T ss_dssp CHHHHHHHHHHHHHTTCSEEEEEETTSCCC----HHHHHHHHHHHHHHC-CSCEEEEECCTTSCHHHHHHHHHHTTCSEE
T ss_pred CHHHHHHHHHHHHHCCCCEEEEcCCCCCcC----HHHHHHHHHHHHHhc-CCeEEEEECCCCChHHHHHHHHHHhCCCEE
Confidence 578889999999999999999943322212 378899999999876 4444332 3332223334444567999998
Q ss_pred ecch
Q 018731 211 AHNI 214 (351)
Q Consensus 211 ~~~i 214 (351)
...+
T Consensus 231 D~ti 234 (464)
T 2nx9_A 231 DTAI 234 (464)
T ss_dssp EEBC
T ss_pred EEec
Confidence 6443
No 178
>1zco_A 2-dehydro-3-deoxyphosphoheptonate aldolase; arabino-heptulosonate, synthase, shikimate, DAHP, DAH7P, DAH DAH7PS, lyase; HET: PEP; 2.25A {Pyrococcus furiosus}
Probab=70.48 E-value=17 Score=32.19 Aligned_cols=64 Identities=17% Similarity=0.311 Sum_probs=49.3
Q ss_pred EeeeeeC--CCCHHHHHHHHHHHHhCCCCEEeeecccCC--CCCcccccCCCCHHHHHHHHHHHHhcCccee
Q 018731 252 SSIMLGL--GESDDDLKEAMADLRSIDVDILTLGQYLQP--TPLHLTVKEYVTPEKFDFWKAYGESIGFRYV 319 (351)
Q Consensus 252 ~~~IvGl--gEt~e~~~~~l~~l~~lg~d~i~i~~~l~P--Tp~~~~~~~~v~~~e~~~~~~~~~~~G~~~~ 319 (351)
..+|.|. .++.+...+.++.+++.|++.+.+. ++.| |+..+. ....+.+..+++++++.|....
T Consensus 24 ~~vIAgpc~~~~~e~a~~~a~~l~~~Ga~~vk~~-~fkprts~~~~~---g~~~egl~~l~~~~~~~Gl~~~ 91 (262)
T 1zco_A 24 FTIIAGPCSIESREQIMKVAEFLAEVGIKVLRGG-AFKPRTSPYSFQ---GYGEKALRWMREAADEYGLVTV 91 (262)
T ss_dssp CEEEEECSBCCCHHHHHHHHHHHHHTTCCEEECB-SSCCCSSTTSCC---CCTHHHHHHHHHHHHHHTCEEE
T ss_pred cEEEEeCCCCCCHHHHHHHHHHHHHcCCCEEEEE-ecccCCCccccc---CccHHHHHHHHHHHHHcCCcEE
Confidence 4567788 7999999999999999999999884 5567 443322 2347778888889999998754
No 179
>3nav_A Tryptophan synthase alpha chain; alpha subunit, structural genomics, CSG center for structural genomics of infectious diseases; 2.10A {Vibrio cholerae o1 biovar el tor} SCOP: c.1.2.4
Probab=70.02 E-value=59 Score=28.79 Aligned_cols=123 Identities=15% Similarity=0.140 Sum_probs=74.4
Q ss_pred HHHHHHHHHhCCCcEEEEeccCCCCCCCCcHHHHHHHHHHHHHhCCCcE-EEEeecCCCCCHHHHHHHHHcCCCeeec-c
Q 018731 136 PENTAKAIASWGVDYIVLTSVDRDDIPDGGSGHFARTVKAMKKQKPDIM-VECLTSDFRGDLRAVETLVHSGLDVFAH-N 213 (351)
Q Consensus 136 i~~~~~~~~~~G~~~I~ltgg~~~~l~~~~~~~~~~li~~ik~~~p~i~-i~~~~~~~~~~~e~l~~L~~aG~~~i~~-~ 213 (351)
+.+.++.+.+.|+..+++ ++++ .+...++.+..+++ ++. +-..+|.. +++.++.+.+.+.+.++. +
T Consensus 114 ~~~f~~~~~~aGvdGvIi-----pDlp---~ee~~~~~~~~~~~--gl~~I~lvap~t--~~eri~~i~~~~~gfiY~vs 181 (271)
T 3nav_A 114 IDDFYQRCQKAGVDSVLI-----ADVP---TNESQPFVAAAEKF--GIQPIFIAPPTA--SDETLRAVAQLGKGYTYLLS 181 (271)
T ss_dssp HHHHHHHHHHHTCCEEEE-----TTSC---GGGCHHHHHHHHHT--TCEEEEEECTTC--CHHHHHHHHHHCCSCEEECC
T ss_pred HHHHHHHHHHCCCCEEEE-----CCCC---HHHHHHHHHHHHHc--CCeEEEEECCCC--CHHHHHHHHHHCCCeEEEEe
Confidence 356777788889999888 3465 34566777777876 444 33444432 678888888887777654 2
Q ss_pred hhchHHHHhhhcCCCCCHHHHHHHHHHHHHhCCCCeEEEeeeeeCCC-CHHHHHHHHHHHHhCCCCEEeeecc
Q 018731 214 IETVKRLQRIVRDPRAGYEQSLEVLKHAKLSKKGLITKSSIMLGLGE-SDDDLKEAMADLRSIDVDILTLGQY 285 (351)
Q Consensus 214 ies~~~~~~~~r~~~~~~~~~l~~i~~~~~~~~Gi~v~~~~IvGlgE-t~e~~~~~l~~l~~lg~d~i~i~~~ 285 (351)
.-...-. + .....+..+.++.+++ .. ..-+++|+|= |.+++.+.+ ..+.|.+-++.-
T Consensus 182 ~~GvTG~----~--~~~~~~~~~~v~~vr~--~~---~~Pv~vGfGIst~e~~~~~~----~~gADgvIVGSA 239 (271)
T 3nav_A 182 RAGVTGA----E--TKANMPVHALLERLQQ--FD---APPALLGFGISEPAQVKQAI----EAGAAGAISGSA 239 (271)
T ss_dssp CC--------------CCHHHHHHHHHHHH--TT---CCCEEECSSCCSHHHHHHHH----HTTCSEEEESHH
T ss_pred ccCCCCc----c--cCCchhHHHHHHHHHH--hc---CCCEEEECCCCCHHHHHHHH----HcCCCEEEECHH
Confidence 2110000 1 1112345566677776 32 3457789965 688775443 478888877643
No 180
>3khj_A Inosine-5-monophosphate dehydrogenase; enzyme-inhibitor complex, oxidoreductase; HET: IMP C64; 2.80A {Cryptosporidium parvum}
Probab=69.73 E-value=70 Score=29.54 Aligned_cols=130 Identities=25% Similarity=0.227 Sum_probs=75.8
Q ss_pred HHHHHHHHhCCCcEEEEeccCCCCCCCCcHHHHHHHHHHHHHhCCCcEEEEeecCCCCCHHHHHHHHHcCCCeeecchhc
Q 018731 137 ENTAKAIASWGVDYIVLTSVDRDDIPDGGSGHFARTVKAMKKQKPDIMVECLTSDFRGDLRAVETLVHSGLDVFAHNIET 216 (351)
Q Consensus 137 ~~~~~~~~~~G~~~I~ltgg~~~~l~~~~~~~~~~li~~ik~~~p~i~i~~~~~~~~~~~e~l~~L~~aG~~~i~~~ies 216 (351)
.+.++.+.+.|++.|+|..... ..+.+.+.++.+++.. ++.+-+-. ..+.+.++.+.++|+|.|.++...
T Consensus 107 ~e~a~~l~eaGad~I~ld~a~G------~~~~~~~~i~~i~~~~-~~~Vivg~---v~t~e~A~~l~~aGaD~I~VG~~~ 176 (361)
T 3khj_A 107 IERAKLLVEAGVDVIVLDSAHG------HSLNIIRTLKEIKSKM-NIDVIVGN---VVTEEATKELIENGADGIKVGIGP 176 (361)
T ss_dssp HHHHHHHHHTTCSEEEECCSCC------SBHHHHHHHHHHHHHC-CCEEEEEE---ECSHHHHHHHHHTTCSEEEECSSC
T ss_pred HHHHHHHHHcCcCeEEEeCCCC------CcHHHHHHHHHHHHhc-CCcEEEcc---CCCHHHHHHHHHcCcCEEEEecCC
Confidence 4566777888999998843332 1257788899998876 55543311 137889999999999999876432
Q ss_pred hHH-HHhhhcCCC-CCHHHHHHHHHHHHHhCCCCeEEEeeeeeCC-CCHHHHHHHHHHHHhCCCCEEeeeccc
Q 018731 217 VKR-LQRIVRDPR-AGYEQSLEVLKHAKLSKKGLITKSSIMLGLG-ESDDDLKEAMADLRSIDVDILTLGQYL 286 (351)
Q Consensus 217 ~~~-~~~~~r~~~-~~~~~~l~~i~~~~~~~~Gi~v~~~~IvGlg-Et~e~~~~~l~~l~~lg~d~i~i~~~l 286 (351)
..- -.+...+.+ .++.-..+..+.+++ .++.+ |..-| .+.+++.+.+. +|++.+.++..+
T Consensus 177 Gs~~~tr~~~g~g~p~~~~i~~v~~~~~~--~~iPV----IA~GGI~~~~di~kala----~GAd~V~vGs~~ 239 (361)
T 3khj_A 177 GSICTTRIVAGVGVPQITAIEKCSSVASK--FGIPI----IADGGIRYSGDIGKALA----VGASSVMIGSIL 239 (361)
T ss_dssp CTTCCHHHHTCBCCCHHHHHHHHHHHHHH--HTCCE----EEESCCCSHHHHHHHHH----HTCSEEEESTTT
T ss_pred CcCCCcccccCCCCCcHHHHHHHHHHHhh--cCCeE----EEECCCCCHHHHHHHHH----cCCCEEEEChhh
Confidence 211 011111111 233333333333334 45553 33223 36777766654 599988887554
No 181
>2bmb_A Folic acid synthesis protein FOL1; folate biosynthesis, transferase, ligase, multifunctional enzyme; HET: PMM; 2.3A {Saccharomyces cerevisiae}
Probab=69.62 E-value=61 Score=31.82 Aligned_cols=76 Identities=12% Similarity=0.146 Sum_probs=45.6
Q ss_pred CchhHHHHHHHHHhCC-----CcEEEEeccC-CCC---CC-CCcHHHHHHHHHHHHHh----CCCcEEEEeecCCCCCHH
Q 018731 132 DPMEPENTAKAIASWG-----VDYIVLTSVD-RDD---IP-DGGSGHFARTVKAMKKQ----KPDIMVECLTSDFRGDLR 197 (351)
Q Consensus 132 ~~eei~~~~~~~~~~G-----~~~I~ltgg~-~~~---l~-~~~~~~~~~li~~ik~~----~p~i~i~~~~~~~~~~~e 197 (351)
+.+++++.++.+.+.| +.-|-+.|.. ++. .+ ..+.+++..+++.+++. ..++.|.+ |. ...+
T Consensus 247 ~~~~al~~a~~mv~~G~~~~~AdIIDIGgeSTRPGa~~vs~eEEl~RvvpvI~~i~~~~~~~~~~vpISI---DT-~~a~ 322 (545)
T 2bmb_A 247 DIESQLNDIIKLCKDALYLHESVIIDVGGCSTRPNSIQASEEEEIRRSIPLIKAIRESTELPQDKVILSI---DT-YRSN 322 (545)
T ss_dssp CHHHHHHHHHHHHHHHHTTCSCEEEEEECSCCSTTCCCCCHHHHHHHHHHHHHHHHHCSSSCGGGEEEEE---EC-CCHH
T ss_pred CHHHHHHHHHHHHHcCCCCCCceEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHhhccccCCCCeEEE---eC-CcHH
Confidence 5688888888888999 8877776533 111 11 12345667777777751 12444433 21 1566
Q ss_pred HHHHHHHcCCCeee
Q 018731 198 AVETLVHSGLDVFA 211 (351)
Q Consensus 198 ~l~~L~~aG~~~i~ 211 (351)
+++.-.++|.+.|+
T Consensus 323 VaeaAl~aGadIIN 336 (545)
T 2bmb_A 323 VAKEAIKVGVDIIN 336 (545)
T ss_dssp HHHHHHHTTCCEEE
T ss_pred HHHHHHHcCCCEEE
Confidence 66776667777665
No 182
>3tva_A Xylose isomerase domain protein TIM barrel; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 2.15A {Planctomyces limnophilus}
Probab=69.50 E-value=21 Score=31.16 Aligned_cols=20 Identities=15% Similarity=0.130 Sum_probs=13.1
Q ss_pred HHHHHHHHHHHhCCCCEEee
Q 018731 263 DDLKEAMADLRSIDVDILTL 282 (351)
Q Consensus 263 e~~~~~l~~l~~lg~d~i~i 282 (351)
+.+.+.++.+.++|+..+.+
T Consensus 102 ~~~~~~i~~a~~lG~~~v~~ 121 (290)
T 3tva_A 102 AEMKEISDFASWVGCPAIGL 121 (290)
T ss_dssp HHHHHHHHHHHHHTCSEEEE
T ss_pred HHHHHHHHHHHHcCCCEEEE
Confidence 45566666667777776665
No 183
>3lot_A Uncharacterized protein; protein of unknown function, structural genomics, joint CENT structural genomics, JCSG; HET: MSE; 1.89A {Archaeoglobus fulgidus}
Probab=69.30 E-value=33 Score=31.19 Aligned_cols=85 Identities=18% Similarity=0.199 Sum_probs=54.7
Q ss_pred CCCCchhHHHHHHHHHhCCCcEEEEeccCC-CCCCCCcHHHHHHHHHHHHHhCCCcEEEEeecCC-C---CCHHHHHHHH
Q 018731 129 APPDPMEPENTAKAIASWGVDYIVLTSVDR-DDIPDGGSGHFARTVKAMKKQKPDIMVECLTSDF-R---GDLRAVETLV 203 (351)
Q Consensus 129 ~~~~~eei~~~~~~~~~~G~~~I~ltgg~~-~~l~~~~~~~~~~li~~ik~~~p~i~i~~~~~~~-~---~~~e~l~~L~ 203 (351)
.+.+++|+.+.+.+..+.|..-+.+=-=++ +--+..+.+.|.++++.|++. +++-|...|.+. . ..++.+.-+.
T Consensus 27 lPvTpeEia~~A~~~~~AGAaivHlHvRdp~dG~ps~d~~~y~e~i~~IR~~-~d~iI~~TTgg~~~~~~~~eeR~~~~~ 105 (314)
T 3lot_A 27 LPVTPDQIVEEAVKAAEAGAGMVHIHARDPKDGRPTTDVEVFRYICREIKKQ-SDVVINVTTGGGGTLGIPVEERAKVVP 105 (314)
T ss_dssp SCCSHHHHHHHHHHHHHHTCSEEEECEECTTTCCEECCHHHHHHHHHHHHHH-CCCEEEECSSTTGGGTCCHHHHTTHHH
T ss_pred CCCCHHHHHHHHHHHHHcCCCEEEEeecCCCCCCcCCCHHHHHHHHHHHHhc-CCeEEEeCCCCcCCCCCCHHHHHHHHH
Confidence 457889999999999999988666521121 001122368999999999987 676666544321 1 1345566666
Q ss_pred HcCCCeeecch
Q 018731 204 HSGLDVFAHNI 214 (351)
Q Consensus 204 ~aG~~~i~~~i 214 (351)
+...+..+++.
T Consensus 106 ~~~Pe~aSln~ 116 (314)
T 3lot_A 106 ALKPEIATFNM 116 (314)
T ss_dssp HHCCSEEEEEC
T ss_pred hcCCceeeecC
Confidence 66777776554
No 184
>3e02_A Uncharacterized protein DUF849; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE; 1.90A {Burkholderia xenovorans LB400}
Probab=68.95 E-value=22 Score=32.33 Aligned_cols=85 Identities=19% Similarity=0.187 Sum_probs=54.0
Q ss_pred CCCCchhHHHHHHHHHhCCCcEEEEeccCC-CCCCCCcHHHHHHHHHHHHHhCCCcEEEEeecC--CCCCHHHHHHHHHc
Q 018731 129 APPDPMEPENTAKAIASWGVDYIVLTSVDR-DDIPDGGSGHFARTVKAMKKQKPDIMVECLTSD--FRGDLRAVETLVHS 205 (351)
Q Consensus 129 ~~~~~eei~~~~~~~~~~G~~~I~ltgg~~-~~l~~~~~~~~~~li~~ik~~~p~i~i~~~~~~--~~~~~e~l~~L~~a 205 (351)
.+.+++|+.+.+.+..+.|..-+.+=-=++ +--+..+.+.|.++++.|++.. ++-|...|.+ ....++.+..+.+.
T Consensus 27 lPvTpeEia~~A~~~~~AGAaivHlHvRdp~dG~ps~d~~~~~e~~~~IR~~~-d~iI~~TTgg~~~~~~eerla~~~~~ 105 (311)
T 3e02_A 27 LPITPEEIVKEGVAAAEAGAAMLHLHARDPLNGRPSQDPDLFMRFLPQLKERT-DAILNITTGGGLGMSLDERLAPARAA 105 (311)
T ss_dssp SCCSHHHHHHHHHHHHHHTCSEEEECEECTTTCCEECCHHHHTTTHHHHHHHC-CCEEEECSSCSTTCCHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHcCCcEEEEeecCCCCCCcCCCHHHHHHHHHHHHHhC-CcEEEECCCCCCCCCHHHHHHHHHhc
Confidence 457889999999999999988666521111 0011223689999999999875 4445443322 11125667777676
Q ss_pred CCCeeecch
Q 018731 206 GLDVFAHNI 214 (351)
Q Consensus 206 G~~~i~~~i 214 (351)
..+..+++.
T Consensus 106 ~Pe~aSln~ 114 (311)
T 3e02_A 106 RPEVASMNM 114 (311)
T ss_dssp CCSEEEEEC
T ss_pred CCCeeeecC
Confidence 787776653
No 185
>1wa3_A 2-keto-3-deoxy-6-phosphogluconate aldolase; KDPG, pyruvate, lyase; 1.9A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 1vlw_A
Probab=68.91 E-value=48 Score=27.39 Aligned_cols=112 Identities=21% Similarity=0.203 Sum_probs=70.6
Q ss_pred CCchhHHHHHHHHHhCCCcEEEEeccCCCCCCCCcHHHHHHHHHHHHHhCC-CcEEEEeecCCCCCHHHHHHHHHcCCCe
Q 018731 131 PDPMEPENTAKAIASWGVDYIVLTSVDRDDIPDGGSGHFARTVKAMKKQKP-DIMVECLTSDFRGDLRAVETLVHSGLDV 209 (351)
Q Consensus 131 ~~~eei~~~~~~~~~~G~~~I~ltgg~~~~l~~~~~~~~~~li~~ik~~~p-~i~i~~~~~~~~~~~e~l~~L~~aG~~~ 209 (351)
.+.++..+.++.+.+.|+..|-++...+ ...+.++.+++..| +..+.+.+ ..+.+.++...++|.|.
T Consensus 19 ~~~~~~~~~~~~~~~~G~~~iev~~~~~---------~~~~~i~~ir~~~~~~~~ig~~~---v~~~~~~~~a~~~Gad~ 86 (205)
T 1wa3_A 19 NSVEEAKEKALAVFEGGVHLIEITFTVP---------DADTVIKELSFLKEKGAIIGAGT---VTSVEQCRKAVESGAEF 86 (205)
T ss_dssp SSHHHHHHHHHHHHHTTCCEEEEETTST---------THHHHHHHTHHHHHTTCEEEEES---CCSHHHHHHHHHHTCSE
T ss_pred CCHHHHHHHHHHHHHCCCCEEEEeCCCh---------hHHHHHHHHHHHCCCCcEEEecc---cCCHHHHHHHHHcCCCE
Confidence 4567888889999999999888765432 12455677776654 55555422 23778889999999998
Q ss_pred eecchhchHHHHhhhcCCCCCHHHHHHHHHHHHHhCCCCeEEEeeeeeCCCCHHHHHHHHHHHHhCCCCEEeee
Q 018731 210 FAHNIETVKRLQRIVRDPRAGYEQSLEVLKHAKLSKKGLITKSSIMLGLGESDDDLKEAMADLRSIDVDILTLG 283 (351)
Q Consensus 210 i~~~ies~~~~~~~~r~~~~~~~~~l~~i~~~~~~~~Gi~v~~~~IvGlgEt~e~~~~~l~~l~~lg~d~i~i~ 283 (351)
+ ++. ... . +.++.+++ .|+.+-. |. .|.+++. ...++|+|.+.++
T Consensus 87 i-v~~-------------~~~-~---~~~~~~~~--~g~~vi~----g~-~t~~e~~----~a~~~Gad~vk~~ 131 (205)
T 1wa3_A 87 I-VSP-------------HLD-E---EISQFCKE--KGVFYMP----GV-MTPTELV----KAMKLGHTILKLF 131 (205)
T ss_dssp E-ECS-------------SCC-H---HHHHHHHH--HTCEEEC----EE-CSHHHHH----HHHHTTCCEEEET
T ss_pred E-EcC-------------CCC-H---HHHHHHHH--cCCcEEC----Cc-CCHHHHH----HHHHcCCCEEEEc
Confidence 8 431 122 1 34455666 6776433 42 3455533 4467888877763
No 186
>4dpp_A DHDPS 2, dihydrodipicolinate synthase 2, chloroplastic; amino-acid biosynthesis, (S)-lysine biosynthesis VIA DAP PAT (beta/alpha)8-barrel; 2.00A {Arabidopsis thaliana} PDB: 4dpq_A* 3tuu_A*
Probab=68.32 E-value=20 Score=33.30 Aligned_cols=28 Identities=7% Similarity=0.019 Sum_probs=13.5
Q ss_pred eeeeC-CCCHHHHHHHHHHHHhCCCCEEe
Q 018731 254 IMLGL-GESDDDLKEAMADLRSIDVDILT 281 (351)
Q Consensus 254 ~IvGl-gEt~e~~~~~l~~l~~lg~d~i~ 281 (351)
+|+|. +.+.++..+..+.+.+.|+|.+.
T Consensus 131 ViaGvg~~st~eai~la~~A~~~Gadavl 159 (360)
T 4dpp_A 131 VIGNTGSNSTREAIHATEQGFAVGMHAAL 159 (360)
T ss_dssp EEEECCCSSHHHHHHHHHHHHHTTCSEEE
T ss_pred EEEecCCCCHHHHHHHHHHHHHcCCCEEE
Confidence 34444 23444445555555555555433
No 187
>3e49_A Uncharacterized protein DUF849 with A TIM barrel; structural genomics, joint center for structural genomics; HET: MSE; 1.75A {Burkholderia xenovorans LB400}
Probab=68.30 E-value=28 Score=31.65 Aligned_cols=86 Identities=20% Similarity=0.215 Sum_probs=54.3
Q ss_pred CCCCchhHHHHHHHHHhCCCcEEEEeccCC-CCCCCCcHHHHHHHHHHHHHhCCCcEEEEeecC--CCCCHHHHHHHHHc
Q 018731 129 APPDPMEPENTAKAIASWGVDYIVLTSVDR-DDIPDGGSGHFARTVKAMKKQKPDIMVECLTSD--FRGDLRAVETLVHS 205 (351)
Q Consensus 129 ~~~~~eei~~~~~~~~~~G~~~I~ltgg~~-~~l~~~~~~~~~~li~~ik~~~p~i~i~~~~~~--~~~~~e~l~~L~~a 205 (351)
.+.+++|+.+.+.+..+.|..-+.+=-=++ +--+..+.+.|.++++.|++.. ++-|...|.+ ....++.+..+.+.
T Consensus 27 lPvTpeEia~~A~~~~~AGAaivHlHvRdp~dG~ps~d~~~~~e~~~~IR~~~-d~iI~~TTgg~~~~~~eerla~~~~~ 105 (311)
T 3e49_A 27 LPVTPDEVAQASIGAAEAGAAVIHLHARDPRDGRPTQDPAAFAEFLPRIKSNT-DAVINLTTGGSPHMTVEERLRPATHY 105 (311)
T ss_dssp SCCSHHHHHHHHHHHHHHTCSEEEECEECTTTCCEECCHHHHTTHHHHHHHHC-CCEEEECSCSCTTSCHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHcCCcEEEEeecCCCCCCcCCCHHHHHHHHHHHHHhC-CcEEEECCCCCCCCCHHHHHHHHHhc
Confidence 457889999999999999988666521111 0011223689999999999875 4445443322 11125667767676
Q ss_pred CCCeeecchh
Q 018731 206 GLDVFAHNIE 215 (351)
Q Consensus 206 G~~~i~~~ie 215 (351)
..+..+++.-
T Consensus 106 ~Pe~aSln~g 115 (311)
T 3e49_A 106 MPELASLNMG 115 (311)
T ss_dssp CCSEEEEECS
T ss_pred CCCeeeecCC
Confidence 7887766543
No 188
>1qop_A Tryptophan synthase alpha chain; lyase, carbon-oxygen lyase, tryptophan biosynthesis, pyridoxal phosphate; HET: IPL PLP; 1.4A {Salmonella typhimurium} SCOP: c.1.2.4 PDB: 1k8x_A* 1wbj_A* 2clk_A* 2j9z_A* 3cep_A* 1k8y_A* 1a5s_A* 1a50_A* 1c29_A* 1c8v_A* 1c9d_A* 1bks_A* 1cx9_A* 1fuy_A* 1cw2_A* 1k7e_A* 1k7f_A* 1k7x_A* 1k3u_A* 1k8z_A* ...
Probab=68.16 E-value=62 Score=28.33 Aligned_cols=15 Identities=20% Similarity=0.144 Sum_probs=8.0
Q ss_pred CCHHHHHHHHHHHHH
Q 018731 229 AGYEQSLEVLKHAKL 243 (351)
Q Consensus 229 ~~~~~~l~~i~~~~~ 243 (351)
.+.+..++.++.+++
T Consensus 76 ~~~~~~~~~v~~ir~ 90 (268)
T 1qop_A 76 VTPAQCFEMLAIIRE 90 (268)
T ss_dssp CCHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHh
Confidence 345555555555555
No 189
>3f4w_A Putative hexulose 6 phosphate synthase; humps, malonate, lyase; 1.65A {Salmonella typhimurium} SCOP: c.1.2.0
Probab=68.03 E-value=24 Score=29.41 Aligned_cols=122 Identities=16% Similarity=0.051 Sum_probs=66.6
Q ss_pred CchhHHHHHHHHHhCCCcEEEEeccCCCCCCCCcHHHHHHHHHHHHHhCCCcEEEEeecCCCCCHH-HHHHHHHcCCCee
Q 018731 132 DPMEPENTAKAIASWGVDYIVLTSVDRDDIPDGGSGHFARTVKAMKKQKPDIMVECLTSDFRGDLR-AVETLVHSGLDVF 210 (351)
Q Consensus 132 ~~eei~~~~~~~~~~G~~~I~ltgg~~~~l~~~~~~~~~~li~~ik~~~p~i~i~~~~~~~~~~~e-~l~~L~~aG~~~i 210 (351)
+.++-.+.++.+. .|++-+-+ |.| +. ...=.++++.+++.++++.+.+..- .....+ .++.++++|.|.+
T Consensus 11 ~~~~~~~~~~~~~-~~~diie~--G~p--~~---~~~g~~~i~~ir~~~~~~~i~~~~~-~~~~~~~~~~~~~~~Gad~v 81 (211)
T 3f4w_A 11 TLPEAMVFMDKVV-DDVDIIEV--GTP--FL---IREGVNAIKAIKEKYPHKEVLADAK-IMDGGHFESQLLFDAGADYV 81 (211)
T ss_dssp CHHHHHHHHHHHG-GGCSEEEE--CHH--HH---HHHTTHHHHHHHHHCTTSEEEEEEE-ECSCHHHHHHHHHHTTCSEE
T ss_pred CHHHHHHHHHHhh-cCccEEEe--CcH--HH---HhccHHHHHHHHHhCCCCEEEEEEE-eccchHHHHHHHHhcCCCEE
Confidence 3556666776664 46665555 222 10 1122467888888766766533110 111234 4899999999999
Q ss_pred ecchhchHHHHhhhcCCCCCHHHHHHHHHHHHHhCCCCeEEEeeeeeCCCCHHHHHHHHHHHHhCCCCEEee
Q 018731 211 AHNIETVKRLQRIVRDPRAGYEQSLEVLKHAKLSKKGLITKSSIMLGLGESDDDLKEAMADLRSIDVDILTL 282 (351)
Q Consensus 211 ~~~ies~~~~~~~~r~~~~~~~~~l~~i~~~~~~~~Gi~v~~~~IvGlgEt~e~~~~~l~~l~~lg~d~i~i 282 (351)
.+..+.. .+...+.++.+++ .|+.+...+ .+ .+|. .+.++.+.+.|+|.+.+
T Consensus 82 ~v~~~~~-------------~~~~~~~~~~~~~--~g~~~~v~~-~~-~~t~---~~~~~~~~~~g~d~i~v 133 (211)
T 3f4w_A 82 TVLGVTD-------------VLTIQSCIRAAKE--AGKQVVVDM-IC-VDDL---PARVRLLEEAGADMLAV 133 (211)
T ss_dssp EEETTSC-------------HHHHHHHHHHHHH--HTCEEEEEC-TT-CSSH---HHHHHHHHHHTCCEEEE
T ss_pred EEeCCCC-------------hhHHHHHHHHHHH--cCCeEEEEe-cC-CCCH---HHHHHHHHHcCCCEEEE
Confidence 7754321 1223345556666 676543221 11 2332 34455666778888766
No 190
>2wqp_A Polysialic acid capsule biosynthesis protein SIAC; NEUB, inhibitor, TIM barrel, sialic acid synthase, transfera; HET: WQP; 1.75A {Neisseria meningitidis} PDB: 2zdr_A 1xuz_A* 1xuu_A 3cm4_A
Probab=67.51 E-value=77 Score=29.19 Aligned_cols=109 Identities=9% Similarity=0.037 Sum_probs=69.0
Q ss_pred CchhHHHHHHHHHhCCCcEEEEeccCCCC--------CC---------------CCcHHHHHHHHHHHHHhCCCcEEEEe
Q 018731 132 DPMEPENTAKAIASWGVDYIVLTSVDRDD--------IP---------------DGGSGHFARTVKAMKKQKPDIMVECL 188 (351)
Q Consensus 132 ~~eei~~~~~~~~~~G~~~I~ltgg~~~~--------l~---------------~~~~~~~~~li~~ik~~~p~i~i~~~ 188 (351)
+.+...+.++.+++.|++-+-++.-.++. +. ..+.+++..+.+..++. ++.+-+
T Consensus 33 s~e~a~~li~~ak~aGadavKfq~~k~~tl~s~~~~~fq~~~~~~~~y~~~~~~~l~~e~~~~L~~~~~~~--Gi~~~s- 109 (349)
T 2wqp_A 33 SLKTAFEMVDAAYNAGAEVVKHQTHIVEDEMSDEAKQVIPGNADVSIYEIMERCALNEEDEIKLKEYVESK--GMIFIS- 109 (349)
T ss_dssp CHHHHHHHHHHHHHHTCSEEEEEECCHHHHCCGGGGGCCCTTCSSCHHHHHHHHCCCHHHHHHHHHHHHHT--TCEEEE-
T ss_pred CHHHHHHHHHHHHHhCCCEEeeeecccccccCcchhccccCCCCccHHHHHHHhCCCHHHHHHHHHHHHHh--CCeEEE-
Confidence 56778888999999999988886322110 11 12346666666666665 665533
Q ss_pred ecCCCCCHHHHHHHHHcCCCeeecchhchHH--HHhhh---cC-----CC-CCHHHHHHHHHHHHHhCCCC
Q 018731 189 TSDFRGDLRAVETLVHSGLDVFAHNIETVKR--LQRIV---RD-----PR-AGYEQSLEVLKHAKLSKKGL 248 (351)
Q Consensus 189 ~~~~~~~~e~l~~L~~aG~~~i~~~ies~~~--~~~~~---r~-----~~-~~~~~~l~~i~~~~~~~~Gi 248 (351)
++ .|.+.++.|.+.|++.+.++--.... +.+.+ .+ ++ .+.+++..+++.+++ .|-
T Consensus 110 t~---~d~~svd~l~~~~v~~~KI~S~~~~n~~LL~~va~~gkPviLstGmat~~Ei~~Ave~i~~--~G~ 175 (349)
T 2wqp_A 110 TL---FSRAAALRLQRMDIPAYKIGSGECNNYPLIKLVASFGKPIILSTGMNSIESIKKSVEIIRE--AGV 175 (349)
T ss_dssp EE---CSHHHHHHHHHHTCSCEEECGGGTTCHHHHHHHHTTCSCEEEECTTCCHHHHHHHHHHHHH--HTC
T ss_pred ee---CCHHHHHHHHhcCCCEEEECcccccCHHHHHHHHhcCCeEEEECCCCCHHHHHHHHHHHHH--cCC
Confidence 22 48899999999999999875322211 11111 10 11 378999999999987 554
No 191
>4fo4_A Inosine 5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.03A {Vibrio cholerae o1 biovar el tor} PDB: 4ff0_A* 4hlv_A* 4fez_A
Probab=67.39 E-value=79 Score=29.27 Aligned_cols=97 Identities=19% Similarity=0.213 Sum_probs=61.0
Q ss_pred HHHHHHHHHHHHHhCCCcEEEEeecCCCCCHHHHHHHHHcCCCeeecchhchHHHHhhhcCCCCCHHHHHHHHHHHHHhC
Q 018731 166 SGHFARTVKAMKKQKPDIMVECLTSDFRGDLRAVETLVHSGLDVFAHNIETVKRLQRIVRDPRAGYEQSLEVLKHAKLSK 245 (351)
Q Consensus 166 ~~~~~~li~~ik~~~p~i~i~~~~~~~~~~~e~l~~L~~aG~~~i~~~ies~~~~~~~~r~~~~~~~~~l~~i~~~~~~~ 245 (351)
.+.+.+.++.+++.. .+.+.+.........+.++.+.++|++.|.++. . ....+.+++.++.+++.+
T Consensus 81 ~e~~~~~i~~vk~~~-~l~vga~vg~~~~~~~~~~~lieaGvd~I~idt--a----------~G~~~~~~~~I~~ik~~~ 147 (366)
T 4fo4_A 81 IEQQAAQVHQVKISG-GLRVGAAVGAAPGNEERVKALVEAGVDVLLIDS--S----------HGHSEGVLQRIRETRAAY 147 (366)
T ss_dssp HHHHHHHHHHHHTTT-SCCCEEECCSCTTCHHHHHHHHHTTCSEEEEEC--S----------CTTSHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHhcC-ceeEEEEeccChhHHHHHHHHHhCCCCEEEEeC--C----------CCCCHHHHHHHHHHHHhc
Confidence 478888898888753 233333221111357999999999999886531 0 112346777888888755
Q ss_pred CCCeEEEeeeeeCCCCHHHHHHHHHHHHhCCCCEEeee
Q 018731 246 KGLITKSSIMLGLGESDDDLKEAMADLRSIDVDILTLG 283 (351)
Q Consensus 246 ~Gi~v~~~~IvGlgEt~e~~~~~l~~l~~lg~d~i~i~ 283 (351)
+++.+ +.|..-|.++. +.+.+.|+|.+.++
T Consensus 148 p~v~V----i~G~v~t~e~A----~~a~~aGAD~I~vG 177 (366)
T 4fo4_A 148 PHLEI----IGGNVATAEGA----RALIEAGVSAVKVG 177 (366)
T ss_dssp TTCEE----EEEEECSHHHH----HHHHHHTCSEEEEC
T ss_pred CCCce----EeeeeCCHHHH----HHHHHcCCCEEEEe
Confidence 56653 33434466654 34456799998883
No 192
>1jvn_A Glutamine, bifunctional histidine biosynthesis protein hishf; substrate channeling, amidotransferase, TIM-barrel AS A SUBS tunnel; HET: 143; 2.10A {Saccharomyces cerevisiae} SCOP: c.1.2.1 c.23.16.1 PDB: 1ox4_B* 1ox5_A* 1ox6_A 1ox4_A
Probab=67.01 E-value=49 Score=32.54 Aligned_cols=98 Identities=19% Similarity=0.167 Sum_probs=63.8
Q ss_pred hHHHHHHHHHhCCCcEEEEeccCCCCCCCCcHHHHHHHHHHHHHhCCCcEEEEeecCCCCCHHHHHHHHH-cCCCeeecc
Q 018731 135 EPENTAKAIASWGVDYIVLTSVDRDDIPDGGSGHFARTVKAMKKQKPDIMVECLTSDFRGDLRAVETLVH-SGLDVFAHN 213 (351)
Q Consensus 135 ei~~~~~~~~~~G~~~I~ltgg~~~~l~~~~~~~~~~li~~ik~~~p~i~i~~~~~~~~~~~e~l~~L~~-aG~~~i~~~ 213 (351)
...+.++.+.+.|+.+|.+++.+.+-... +.+ .++++.+++.. ++.|-+ +++..+.+.+..+.+ .|++.+.++
T Consensus 453 ~~~e~a~~~~~~Ga~~il~t~~~~dG~~~-G~d--~~li~~l~~~~-~iPVIa--sGGi~s~~d~~~~~~~~G~~gvivg 526 (555)
T 1jvn_A 453 GVWELTRACEALGAGEILLNCIDKDGSNS-GYD--LELIEHVKDAV-KIPVIA--SSGAGVPEHFEEAFLKTRADACLGA 526 (555)
T ss_dssp EHHHHHHHHHHTTCCEEEECCGGGTTTCS-CCC--HHHHHHHHHHC-SSCEEE--CSCCCSHHHHHHHHHHSCCSEEEES
T ss_pred CHHHHHHHHHHcCCCEEEEeCCCCCCCCC-CCC--HHHHHHHHHhC-CccEEE--ECCCCCHHHHHHHHHhcCChHHHHH
Confidence 45678888889999999998865432221 111 46667777653 455533 566668888888887 899988665
Q ss_pred hhchHHHHhhhcCCCCCHHHHHHHHHHHHHhCCCCeEE
Q 018731 214 IETVKRLQRIVRDPRAGYEQSLEVLKHAKLSKKGLITK 251 (351)
Q Consensus 214 ies~~~~~~~~r~~~~~~~~~l~~i~~~~~~~~Gi~v~ 251 (351)
..++. +..++.+..+.+ ++ .|+.+.
T Consensus 527 ----~a~~~----~~~~~~e~~~~l---~~--~gi~~r 551 (555)
T 1jvn_A 527 ----GMFHR----GEFTVNDVKEYL---LE--HGLKVR 551 (555)
T ss_dssp ----HHHHT----TSCCHHHHHHHH---HH--TTCCCC
T ss_pred ----HHHHc----CCCCHHHHHHHH---HH--CCCccc
Confidence 23332 356787777654 44 777654
No 193
>1rpx_A Protein (ribulose-phosphate 3-epimerase); chloroplast, calvin cycle, oxidative pentose PH pathway; 2.30A {Solanum tuberosum} SCOP: c.1.2.2
Probab=66.85 E-value=23 Score=30.14 Aligned_cols=79 Identities=18% Similarity=0.240 Sum_probs=47.5
Q ss_pred CchhHHHHHHHHHhCCCcEEEEeccCCCCCCCCcHHHHHHHHHHHHHhCC-CcEEEEeecCCCCCHHHHHHHHHcCCCee
Q 018731 132 DPMEPENTAKAIASWGVDYIVLTSVDRDDIPDGGSGHFARTVKAMKKQKP-DIMVECLTSDFRGDLRAVETLVHSGLDVF 210 (351)
Q Consensus 132 ~~eei~~~~~~~~~~G~~~I~ltgg~~~~l~~~~~~~~~~li~~ik~~~p-~i~i~~~~~~~~~~~e~l~~L~~aG~~~i 210 (351)
++....+.++.+.+.|++.+.+.-.+....++ ...-.++++.+++... .+.+.+..++ .++.++.+.++|+|.+
T Consensus 21 d~~~~~~~i~~~~~~G~d~i~l~~~dg~f~~~--~~~~~~~i~~l~~~~~~~~~v~l~vnd---~~~~v~~~~~~Gad~v 95 (230)
T 1rpx_A 21 NFSKLGEQVKAIEQAGCDWIHVDVMDGRFVPN--ITIGPLVVDSLRPITDLPLDVHLMIVE---PDQRVPDFIKAGADIV 95 (230)
T ss_dssp CGGGHHHHHHHHHHTTCCCEEEEEEBSSSSSC--BCCCHHHHHHHGGGCCSCEEEEEESSS---HHHHHHHHHHTTCSEE
T ss_pred CHHHHHHHHHHHHHCCCCEEEEeeccCCcccc--cccCHHHHHHHHhccCCcEEEEEEecC---HHHHHHHHHHcCCCEE
Confidence 45567777888888899877664222111111 0111467777877641 2344444432 2358899999999999
Q ss_pred ecchh
Q 018731 211 AHNIE 215 (351)
Q Consensus 211 ~~~ie 215 (351)
.+..+
T Consensus 96 ~vh~~ 100 (230)
T 1rpx_A 96 SVHCE 100 (230)
T ss_dssp EEECS
T ss_pred EEEec
Confidence 86644
No 194
>1xg4_A Probable methylisocitrate lyase; 2-methylisocitrate lyase/inhibitor complex, isocitrate lyase superfamily; HET: ICT; 1.60A {Escherichia coli} PDB: 1xg3_A* 1mum_A 1oqf_A 1ujq_A 1o5q_A
Probab=66.10 E-value=61 Score=29.09 Aligned_cols=86 Identities=10% Similarity=0.035 Sum_probs=65.2
Q ss_pred CHHHHHHHHHcCCCeeecchhchHH-HHhhhcCC-CCCHHHHHHHHHHHHHhCCCCeEEEeeeeeCCCCHHHHHHHHHHH
Q 018731 195 DLRAVETLVHSGLDVFAHNIETVKR-LQRIVRDP-RAGYEQSLEVLKHAKLSKKGLITKSSIMLGLGESDDDLKEAMADL 272 (351)
Q Consensus 195 ~~e~l~~L~~aG~~~i~~~ies~~~-~~~~~r~~-~~~~~~~l~~i~~~~~~~~Gi~v~~~~IvGlgEt~e~~~~~l~~l 272 (351)
|.-....+.++|++.+.++=-.+.. .. ...+. ..++++.+..++.+.+. ..+.+.+|+-.|+|.+.+++.+++..+
T Consensus 26 D~~sA~~~~~aG~~ai~vs~~~~a~~~~-G~pD~~~vt~~em~~~~~~I~~~-~~~PviaD~d~Gyg~~~~~~~~~v~~l 103 (295)
T 1xg4_A 26 NANHALLAQRAGYQAIYLSGGGVAAGSL-GLPDLGISTLDDVLTDIRRITDV-CSLPLLVDADIGFGSSAFNVARTVKSM 103 (295)
T ss_dssp SHHHHHHHHHTTCSCEEECHHHHHHTTT-CCCSSSCSCHHHHHHHHHHHHHH-CCSCEEEECTTCSSSSHHHHHHHHHHH
T ss_pred CHHHHHHHHHcCCCEEEECchHhhhhhc-CCCCCCCCCHHHHHHHHHHHHhh-CCCCEEecCCcccCCCHHHHHHHHHHH
Confidence 6778888999999999875221111 11 11111 35899999999888753 456789999999998999999999999
Q ss_pred HhCCCCEEee
Q 018731 273 RSIDVDILTL 282 (351)
Q Consensus 273 ~~lg~d~i~i 282 (351)
.+.|+..+.+
T Consensus 104 ~~aGa~gv~i 113 (295)
T 1xg4_A 104 IKAGAAGLHI 113 (295)
T ss_dssp HHHTCSEEEE
T ss_pred HHcCCeEEEE
Confidence 9999998887
No 195
>3f4w_A Putative hexulose 6 phosphate synthase; humps, malonate, lyase; 1.65A {Salmonella typhimurium} SCOP: c.1.2.0
Probab=65.98 E-value=56 Score=27.07 Aligned_cols=120 Identities=19% Similarity=0.223 Sum_probs=68.8
Q ss_pred HHHHHHhCCCcEEEEeccCCCCCCCCcHHHHHHHHHHHHHhCCCcEEE--EeecCCCCCHHHHHHHHHcCCCeeecchhc
Q 018731 139 TAKAIASWGVDYIVLTSVDRDDIPDGGSGHFARTVKAMKKQKPDIMVE--CLTSDFRGDLRAVETLVHSGLDVFAHNIET 216 (351)
Q Consensus 139 ~~~~~~~~G~~~I~ltgg~~~~l~~~~~~~~~~li~~ik~~~p~i~i~--~~~~~~~~~~e~l~~L~~aG~~~i~~~ies 216 (351)
.++.+.+.|++.+.+-+. + . .+.+.++++.+++. ++.+- +.++. ...+.++.+.++|++.|.++ .
T Consensus 69 ~~~~~~~~Gad~v~v~~~-~---~---~~~~~~~~~~~~~~--g~~~~v~~~~~~--t~~~~~~~~~~~g~d~i~v~--~ 135 (211)
T 3f4w_A 69 ESQLLFDAGADYVTVLGV-T---D---VLTIQSCIRAAKEA--GKQVVVDMICVD--DLPARVRLLEEAGADMLAVH--T 135 (211)
T ss_dssp HHHHHHHTTCSEEEEETT-S---C---HHHHHHHHHHHHHH--TCEEEEECTTCS--SHHHHHHHHHHHTCCEEEEE--C
T ss_pred HHHHHHhcCCCEEEEeCC-C---C---hhHHHHHHHHHHHc--CCeEEEEecCCC--CHHHHHHHHHHcCCCEEEEc--C
Confidence 467778899999988432 1 1 25678888888887 44433 22332 12477899999999988654 1
Q ss_pred hHHHHhhhcCCCCCHHHHHHHHHHHHHhCCCCeEEEeeeeeCCCCHHHHHHHHHHHHhCCCCEEeeeccc
Q 018731 217 VKRLQRIVRDPRAGYEQSLEVLKHAKLSKKGLITKSSIMLGLGESDDDLKEAMADLRSIDVDILTLGQYL 286 (351)
Q Consensus 217 ~~~~~~~~r~~~~~~~~~l~~i~~~~~~~~Gi~v~~~~IvGlgEt~e~~~~~l~~l~~lg~d~i~i~~~l 286 (351)
.-.-.. . +... ++.++.+++..+++. ++++.|=+.+ ++..+.+.|+|.+.++..+
T Consensus 136 g~~g~~-~--~~~~----~~~i~~l~~~~~~~~----i~~~gGI~~~----~~~~~~~~Gad~vvvGsai 190 (211)
T 3f4w_A 136 GTDQQA-A--GRKP----IDDLITMLKVRRKAR----IAVAGGISSQ----TVKDYALLGPDVVIVGSAI 190 (211)
T ss_dssp CHHHHH-T--TCCS----HHHHHHHHHHCSSCE----EEEESSCCTT----THHHHHTTCCSEEEECHHH
T ss_pred CCcccc-c--CCCC----HHHHHHHHHHcCCCc----EEEECCCCHH----HHHHHHHcCCCEEEECHHH
Confidence 111111 1 1112 344455555323444 3444444443 3445567899998887443
No 196
>3ndo_A Deoxyribose-phosphate aldolase; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ALS collaborative crystallography; HET: GOL; 1.25A {Mycobacterium smegmatis} PDB: 3ng3_A
Probab=65.87 E-value=66 Score=27.79 Aligned_cols=153 Identities=9% Similarity=0.068 Sum_probs=94.1
Q ss_pred CCchhHHHHHHHHHhCCCcEEEEeccCCCCCCCCcHHHHHHHHHHHHHhCCCcEEEEee--cCCCCCH----HHHHHHHH
Q 018731 131 PDPMEPENTAKAIASWGVDYIVLTSVDRDDIPDGGSGHFARTVKAMKKQKPDIMVECLT--SDFRGDL----RAVETLVH 204 (351)
Q Consensus 131 ~~~eei~~~~~~~~~~G~~~I~ltgg~~~~l~~~~~~~~~~li~~ik~~~p~i~i~~~~--~~~~~~~----e~l~~L~~ 204 (351)
.+.+++.+.+++..+.|+..|++. | .+...++.++. .++.+.+.. |.+..+. ...+...+
T Consensus 26 ~t~~~i~~lc~eA~~~~~~aVcV~---p---------~~v~~a~~l~~--~~v~v~tVigFP~G~~~~~~K~~E~~~Ai~ 91 (231)
T 3ndo_A 26 ATPSDVTALVDEAADLGVFAVCVS---P---------PLVSVAAGVAP--SGLAIAAVAGFPSGKHVPGIKATEAELAVA 91 (231)
T ss_dssp CCHHHHHHHHHHHHHHTCSEEEEC---G---------GGHHHHHHHCC--TTCEEEEEESTTTCCSCHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHhCCcEEEEC---H---------HHHHHHHHhcC--CCCeEEEEecCCCCCCcHHHHHHHHHHHHH
Confidence 456889999999999999999982 1 22333333322 356665433 2222221 34556677
Q ss_pred cCCCeeecchhchHHHHhhhcCCCCCHHHHHHHHHHHHHhCCCCeEEEeeeeeCC---CCHHHHHHHHHHHHhCCCCEEe
Q 018731 205 SGLDVFAHNIETVKRLQRIVRDPRAGYEQSLEVLKHAKLSKKGLITKSSIMLGLG---ESDDDLKEAMADLRSIDVDILT 281 (351)
Q Consensus 205 aG~~~i~~~ies~~~~~~~~r~~~~~~~~~l~~i~~~~~~~~Gi~v~~~~IvGlg---Et~e~~~~~l~~l~~lg~d~i~ 281 (351)
.|.|.|-+-+.- ..++ ..+++...+-|+.+++...|..++.-+=.|+- .|++++....+...+.|+|+|-
T Consensus 92 ~GAdEIDmVini-----g~lk--~g~~~~v~~ei~~v~~a~~~~~lKvIiEt~~L~~~~t~eei~~a~~ia~~aGADfVK 164 (231)
T 3ndo_A 92 AGATEIDMVIDV-----GAAL--AGDLDAVSADITAVRKAVRAATLKVIVESAALLEFSGEPLLADVCRVARDAGADFVK 164 (231)
T ss_dssp TTCSEEEEECCH-----HHHH--TTCHHHHHHHHHHHHHHTTTSEEEEECCHHHHHHHTCHHHHHHHHHHHHHTTCSEEE
T ss_pred cCCCEEEEEeeh-----Hhhh--cccHHHHHHHHHHHHHHccCCceEEEEECcccCCCCCHHHHHHHHHHHHHHCcCEEE
Confidence 899988543221 1122 45888888888888876657655444333442 3899999999999999999987
Q ss_pred eecccCCCCCcccccCCCCHHHHHHHHHHH
Q 018731 282 LGQYLQPTPLHLTVKEYVTPEKFDFWKAYG 311 (351)
Q Consensus 282 i~~~l~PTp~~~~~~~~v~~~e~~~~~~~~ 311 (351)
.+ |.+.. ....+.++...+++..
T Consensus 165 TS-----TGf~~--~~gAt~edv~lm~~~v 187 (231)
T 3ndo_A 165 TS-----TGFHP--SGGASVQAVEIMARTV 187 (231)
T ss_dssp CC-----CSCCT--TCSCCHHHHHHHHHHH
T ss_pred cC-----CCCCC--CCCCCHHHHHHHHHHh
Confidence 64 32210 1234556666666554
No 197
>3lye_A Oxaloacetate acetyl hydrolase; (alpha/beta)8 barrel; 1.30A {Cryphonectria parasitica} PDB: 3m0j_A* 3m0k_A
Probab=65.15 E-value=43 Score=30.28 Aligned_cols=87 Identities=11% Similarity=-0.045 Sum_probs=63.4
Q ss_pred CHHHHHHHHHcCCCeeecchhchHHHHhhhcCC-CCCHHHHHHHHHHHHHhCC-CCeEEEeeeeeCCCCHHHHHHHHHHH
Q 018731 195 DLRAVETLVHSGLDVFAHNIETVKRLQRIVRDP-RAGYEQSLEVLKHAKLSKK-GLITKSSIMLGLGESDDDLKEAMADL 272 (351)
Q Consensus 195 ~~e~l~~L~~aG~~~i~~~ies~~~~~~~~r~~-~~~~~~~l~~i~~~~~~~~-Gi~v~~~~IvGlgEt~e~~~~~l~~l 272 (351)
|.-....+.++|++.+.++=.++........+. ..++++.+..++.+.+... .+.+.+|+-.|+|. .+++.++++.+
T Consensus 34 D~~sA~l~e~aGf~ai~vsG~~~a~s~~G~pD~~~vt~~em~~~~~~i~r~~~~~~PviaD~d~Gyg~-~~~v~~~v~~l 112 (307)
T 3lye_A 34 DGLSARTAMELGFKSLYMTGAGTTASRLGQPDLAIAQLHDMRDNADMIANLDPFGPPLIADMDTGYGG-PIMVARTVEHY 112 (307)
T ss_dssp SHHHHHHHHHTTCSCEEECHHHHHHHHHCCCSSSCSCHHHHHHHHHHHHTSSTTSCCEEEECTTCSSS-HHHHHHHHHHH
T ss_pred CHHHHHHHHHcCCCEEEeccHHHHHHhcCCCCCCCCCHHHHHHHHHhhhccCCCCCcEEEECCCCCCC-HHHHHHHHHHH
Confidence 667888889999999987433322211111111 3589999999988876222 47899999999974 78899999999
Q ss_pred HhCCCCEEee
Q 018731 273 RSIDVDILTL 282 (351)
Q Consensus 273 ~~lg~d~i~i 282 (351)
.+.|+.-+.+
T Consensus 113 ~~aGaagv~i 122 (307)
T 3lye_A 113 IRSGVAGAHL 122 (307)
T ss_dssp HHTTCCEEEE
T ss_pred HHcCCeEEEE
Confidence 9999998887
No 198
>1tre_A Triosephosphate isomerase; intramolecular oxidoreductase; 2.60A {Escherichia coli} SCOP: c.1.1.1 PDB: 1tmh_A
Probab=65.09 E-value=63 Score=28.37 Aligned_cols=56 Identities=18% Similarity=0.191 Sum_probs=39.1
Q ss_pred HHHHHHHcCCCeeecchhchHHHHhhhcCCCCCHHHHHHHHHHHHHhCCCCeEEEeeeeeCCCCHHHH
Q 018731 198 AVETLVHSGLDVFAHNIETVKRLQRIVRDPRAGYEQSLEVLKHAKLSKKGLITKSSIMLGLGESDDDL 265 (351)
Q Consensus 198 ~l~~L~~aG~~~i~~~ies~~~~~~~~r~~~~~~~~~l~~i~~~~~~~~Gi~v~~~~IvGlgEt~e~~ 265 (351)
-...|++.|++.+-+|- ..+|.+- +.+-+.+-+.++.+.+ .|+. .|+..|||.++.
T Consensus 79 S~~mL~d~G~~~ViiGH----SERR~~f--~Etd~~v~~Kv~~Al~--~GL~----pI~CvGEtleer 134 (255)
T 1tre_A 79 SAAMLKDIGAQYIIIGH----SERRTYH--KESDELIAKKFAVLKE--QGLT----PVLCIGETEAEN 134 (255)
T ss_dssp CHHHHHHHTCCEEEESC----HHHHHHS--CCCHHHHHHHHHHHHH--TTCE----EEEEECCCHHHH
T ss_pred CHHHHHHcCCCEEEECc----ccccccc--CCCHHHHHHHHHHHHH--CCCE----EEEEcCCcHHHH
Confidence 34668889999988762 2233332 4577777777888888 8986 356669998873
No 199
>3vzx_A Heptaprenylglyceryl phosphate synthase; biosynthesis, prenyltransferases, enzyme catalysis, transfer; 1.54A {Bacillus subtilis} PDB: 3vzy_A* 3vzz_A* 3w00_A* 1viz_A
Probab=65.04 E-value=58 Score=28.06 Aligned_cols=72 Identities=11% Similarity=-0.031 Sum_probs=49.7
Q ss_pred CCchhHHHHHHHHHhCCCcEEEEeccCCCCCCCCcHHHHHHHHHHHHHhCCCcEEEEeecCCCCCHHHHHHHHHcCCCee
Q 018731 131 PDPMEPENTAKAIASWGVDYIVLTSVDRDDIPDGGSGHFARTVKAMKKQKPDIMVECLTSDFRGDLRAVETLVHSGLDVF 210 (351)
Q Consensus 131 ~~~eei~~~~~~~~~~G~~~I~ltgg~~~~l~~~~~~~~~~li~~ik~~~p~i~i~~~~~~~~~~~e~l~~L~~aG~~~i 210 (351)
.+++++...+....-.|.+.|++-+ ... .. + .++++.+++...++.+.+ .++..++|.++.+. +|.|.+
T Consensus 137 ~~~e~~~~~a~~a~~~g~~~VYld~-sG~-~~--~----~~~i~~i~~~~~~~Pv~v--GGGI~t~e~a~~~~-~gAD~V 205 (228)
T 3vzx_A 137 LNMDDIVAYARVSELLQLPIFYLEY-SGV-LG--D----IEAVKKTKAVLETSTLFY--GGGIKDAETAKQYA-EHADVI 205 (228)
T ss_dssp CCHHHHHHHHHHHHHTTCSEEEEEC-TTS-CC--C----HHHHHHHHHHCSSSEEEE--ESSCCSHHHHHHHH-TTCSEE
T ss_pred CCHHHHHHHHHHHHHcCCCEEEecC-CCC-cC--C----HHHHHHHHHhcCCCCEEE--eCCCCCHHHHHHHH-hCCCEE
Confidence 3467776666666667899998866 321 11 1 567777887643456543 45667899999998 799999
Q ss_pred ecc
Q 018731 211 AHN 213 (351)
Q Consensus 211 ~~~ 213 (351)
.+|
T Consensus 206 VVG 208 (228)
T 3vzx_A 206 VVG 208 (228)
T ss_dssp EEC
T ss_pred EEC
Confidence 876
No 200
>3nl6_A Thiamine biosynthetic bifunctional enzyme; thiamin biosynthesis, eukaryoyes, transferase; HET: TPS ACP; 2.61A {Candida glabrata} PDB: 3nl2_A* 3nl5_A* 3nl3_A* 3nm3_A* 3nm1_A*
Probab=64.77 E-value=86 Score=30.70 Aligned_cols=136 Identities=14% Similarity=0.133 Sum_probs=74.6
Q ss_pred hhHHHHHHHHHhCCCcEEEEeccCCCCCCCCcHHHHHHHHHHHHHhC--CCcEEEEeecCCCCCHHHHHHHHHcCCCeee
Q 018731 134 MEPENTAKAIASWGVDYIVLTSVDRDDIPDGGSGHFARTVKAMKKQK--PDIMVECLTSDFRGDLRAVETLVHSGLDVFA 211 (351)
Q Consensus 134 eei~~~~~~~~~~G~~~I~ltgg~~~~l~~~~~~~~~~li~~ik~~~--p~i~i~~~~~~~~~~~e~l~~L~~aG~~~i~ 211 (351)
....+.++++.+.|++.|.|--- +... ..+.++++.+++.. .++.+- .++ .++...+.|.|.|.
T Consensus 25 ~~l~~~ve~al~~Gv~~vQlR~K---~~~~---~~~~~~a~~l~~l~~~~~v~li--IND------~~dlA~~~gAdGVH 90 (540)
T 3nl6_A 25 KTLYGQVEAGLQNGVTLVQIREK---DADT---KFFIEEALQIKELCHAHNVPLI--IND------RIDVAMAIGADGIH 90 (540)
T ss_dssp CCHHHHHHHHHHTTCSEEEECCS---SSCT---THHHHHHHHHHHHHHHTTCCEE--ECS------CSHHHHHTTCSEEE
T ss_pred chHHHHHHHHHHCCCCEEEEecC---CCCH---HHHHHHHHHHHHHHHhcCCEEE--EeC------cHHHHHHcCCCEEE
Confidence 34667777888899999988321 1222 34455555554321 144432 343 33556678999998
Q ss_pred cchhchHHHHhhhcCCCCCHHHHHHHHHHHHHhCCCCeEEEeeeeeC-CCCHHHHHHHHHHHHhCC---CCEEeeecccC
Q 018731 212 HNIETVKRLQRIVRDPRAGYEQSLEVLKHAKLSKKGLITKSSIMLGL-GESDDDLKEAMADLRSID---VDILTLGQYLQ 287 (351)
Q Consensus 212 ~~ies~~~~~~~~r~~~~~~~~~l~~i~~~~~~~~Gi~v~~~~IvGl-gEt~e~~~~~l~~l~~lg---~d~i~i~~~l~ 287 (351)
++.+... . ..++.+.. ++. ++|. -.|.++..+ ..+.| +|++.+++++
T Consensus 91 Lgq~dl~------------~----~~ar~~lg--~~~------iiG~S~ht~eea~~----A~~~G~~~aDYv~~Gpvf- 141 (540)
T 3nl6_A 91 VGQDDMP------------I----PMIRKLVG--PDM------VIGWSVGFPEEVDE----LSKMGPDMVDYIGVGTLF- 141 (540)
T ss_dssp ECTTSSC------------H----HHHHHHHC--TTS------EEEEEECSHHHHHH----HHHTCC--CCEEEESCCS-
T ss_pred EChhhcC------------H----HHHHHHhC--CCC------EEEEECCCHHHHHH----HHHcCCCCCCEEEEcCCC-
Confidence 8754321 1 12222222 443 4666 567777654 44678 9999997654
Q ss_pred CCCCccccc-CCCCHHHHHHHHHHHH
Q 018731 288 PTPLHLTVK-EYVTPEKFDFWKAYGE 312 (351)
Q Consensus 288 PTp~~~~~~-~~v~~~e~~~~~~~~~ 312 (351)
||+-..... ..+.++.+.++.+...
T Consensus 142 ~T~tK~~~~~~~~G~~~l~~i~~~~~ 167 (540)
T 3nl6_A 142 PTLTKKNPKKAPMGTAGAIRVLDALE 167 (540)
T ss_dssp CCCCCC----CCCHHHHHHHHHHHHH
T ss_pred CCCCCCCcCCCCCCHHHHHHHHHHHH
Confidence 654432111 2344666666665543
No 201
>2r91_A 2-keto-3-deoxy-(6-phospho-)gluconate aldolase; TIM barrel, thermophilic, lyase; 2.00A {Thermoproteus tenax} PDB: 2r94_A
Probab=64.65 E-value=13 Score=33.25 Aligned_cols=76 Identities=17% Similarity=0.062 Sum_probs=50.2
Q ss_pred CCchhHHHHHHHHHhCCCcEEEEec--cCCCCCCCCcHHHHHHHHHHHHHhCCCcEEEEeecCCCCCH---HHHHHHHHc
Q 018731 131 PDPMEPENTAKAIASWGVDYIVLTS--VDRDDIPDGGSGHFARTVKAMKKQKPDIMVECLTSDFRGDL---RAVETLVHS 205 (351)
Q Consensus 131 ~~~eei~~~~~~~~~~G~~~I~ltg--g~~~~l~~~~~~~~~~li~~ik~~~p~i~i~~~~~~~~~~~---e~l~~L~~a 205 (351)
.+.+...+.++.+.+.|++.+++.| |+...|. .+.-.++++.+.+...+ |-+-+. ...+. +..+...++
T Consensus 16 iD~~~l~~lv~~li~~Gv~gl~v~GttGE~~~Ls---~~Er~~v~~~~~~~~~g--vi~Gvg-~~~t~~ai~la~~A~~~ 89 (286)
T 2r91_A 16 LDPELFANHVKNITSKGVDVVFVAGTTGLGPALS---LQEKMELTDAATSAARR--VIVQVA-SLNADEAIALAKYAESR 89 (286)
T ss_dssp ECHHHHHHHHHHHHHTTCCEEEETSTTTTGGGSC---HHHHHHHHHHHHHHCSS--EEEECC-CSSHHHHHHHHHHHHHT
T ss_pred cCHHHHHHHHHHHHHCCCCEEEECccccChhhCC---HHHHHHHHHHHHHHhCC--EEEeeC-CCCHHHHHHHHHHHHhc
Confidence 5567788899998999999998866 4434454 46677888888776555 322121 11234 455666778
Q ss_pred CCCeeec
Q 018731 206 GLDVFAH 212 (351)
Q Consensus 206 G~~~i~~ 212 (351)
|.|.+.+
T Consensus 90 Gadavlv 96 (286)
T 2r91_A 90 GAEAVAS 96 (286)
T ss_dssp TCSEEEE
T ss_pred CCCEEEE
Confidence 9998854
No 202
>2eja_A URO-D, UPD, uroporphyrinogen decarboxylase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 1.90A {Aquifex aeolicus}
Probab=64.48 E-value=51 Score=29.83 Aligned_cols=145 Identities=12% Similarity=0.071 Sum_probs=75.7
Q ss_pred HHHHhCCCcEEEEeccCCCCCCCC-----cHHHHHHHHHHHHHhCCCcEEEEeecCCCCCHHHHHHHHHcCCCeeecchh
Q 018731 141 KAIASWGVDYIVLTSVDRDDIPDG-----GSGHFARTVKAMKKQKPDIMVECLTSDFRGDLRAVETLVHSGLDVFAHNIE 215 (351)
Q Consensus 141 ~~~~~~G~~~I~ltgg~~~~l~~~-----~~~~~~~li~~ik~~~p~i~i~~~~~~~~~~~e~l~~L~~aG~~~i~~~ie 215 (351)
+...+.|++.|.+.......++.. -.+++.++++.+++. +++.+-... .+ +...++.+++.|+|.+++.-
T Consensus 186 ~~~~~aGad~i~i~d~~~~~lsp~~f~ef~~p~~k~i~~~i~~~-~g~~~i~~~-~g--~~~~l~~l~~~g~d~~~~d~- 260 (338)
T 2eja_A 186 KEQIKAGADVVQIFDSWVNNLSLEDYGEYVYPYVNYLISELKDF-SDTPVIYFF-RG--SSSFIDLAVDYRADALSVDW- 260 (338)
T ss_dssp HHHHHTTCSEEEEEETTGGGSCHHHHHHHTHHHHHHHHHHHHHH-CCCCEEEEE-SS--HHHHHHHHTTSCCSEEECCT-
T ss_pred HHHHHhCCCEEEEecCccccCCHHHHHHHhHHHHHHHHHHHhhc-CCCCEEEEc-CC--cHHHHHHHHHcCCCEEEeCC-
Confidence 344568999876632221123311 135667888888876 454433222 22 36789999999999886531
Q ss_pred chHHHHhhhcCCCCCHHHHHHHHHHHHHhCCCCeEEEeeeeeCCCCHHHHHHHHHHHHh-CCCCEEeeecccCCCCCccc
Q 018731 216 TVKRLQRIVRDPRAGYEQSLEVLKHAKLSKKGLITKSSIMLGLGESDDDLKEAMADLRS-IDVDILTLGQYLQPTPLHLT 294 (351)
Q Consensus 216 s~~~~~~~~r~~~~~~~~~l~~i~~~~~~~~Gi~v~~~~IvGlgEt~e~~~~~l~~l~~-lg~d~i~i~~~l~PTp~~~~ 294 (351)
..+.++..+.++.+.. .|+.. .++ ..|.|++.+.++.+.+ ++...-.+ +.+ .+ .
T Consensus 261 ------------~~dl~~~~~~~~~~l~--Gn~dp--~~l---~gt~e~i~~~v~~~l~~~g~~~g~I---~~~--g~-g 315 (338)
T 2eja_A 261 ------------SVDIPELFKIYDKGFQ--GNLEP--AVL---YASEEVIEEKTLGLLRRIPVKTRYV---FNL--GH-G 315 (338)
T ss_dssp ------------TSCHHHHHHHCCSEEE--CCBCG--GGG---GSCHHHHHHHHHHHHTTCCCSSSEE---BCB--SS-C
T ss_pred ------------CCCHHHHHHhCCeEEE--ECCCH--HHh---cCCHHHHHHHHHHHHHHhCCCCCeE---EeC--CC-C
Confidence 1233322222211111 34432 222 3478888776666654 46422112 112 22 1
Q ss_pred ccCCCCHHHHHHHHHHHHhcC
Q 018731 295 VKEYVTPEKFDFWKAYGESIG 315 (351)
Q Consensus 295 ~~~~v~~~e~~~~~~~~~~~G 315 (351)
+...++++.+..+.+.+++.|
T Consensus 316 i~~~~p~en~~a~v~~v~~~~ 336 (338)
T 2eja_A 316 LAPDMELEKVKYLVDLVKSFP 336 (338)
T ss_dssp CCTTSCHHHHHHHHHHHHTCC
T ss_pred CCCCCCHHHHHHHHHHHHHhc
Confidence 234567777777777776554
No 203
>2w6r_A Imidazole glycerol phosphate synthase subunit HISF; lyase, fusion protein, cobalamin, precorrin, novel fold, VIT; 2.10A {Thermotoga maritima}
Probab=64.38 E-value=32 Score=29.82 Aligned_cols=72 Identities=18% Similarity=0.238 Sum_probs=47.1
Q ss_pred HHHHHHHHHhCCCcEEEEeccCCCCCCCCcHHHHHHHHHHHHHhCCCcEEEEeecCCCCCHHHHHHHHHcCCCeeecc
Q 018731 136 PENTAKAIASWGVDYIVLTSVDRDDIPDGGSGHFARTVKAMKKQKPDIMVECLTSDFRGDLRAVETLVHSGLDVFAHN 213 (351)
Q Consensus 136 i~~~~~~~~~~G~~~I~ltgg~~~~l~~~~~~~~~~li~~ik~~~p~i~i~~~~~~~~~~~e~l~~L~~aG~~~i~~~ 213 (351)
..+.++.+.+.|+..|++++...+... .+.+ .++++.+++.. ++.+-+ .++..+.+.+..+.++|++.+.++
T Consensus 158 ~~e~~~~~~~~G~~~i~~t~~~~~g~~-~g~~--~~~i~~l~~~~-~ipvia--~GGI~~~ed~~~~~~~Gadgv~vg 229 (266)
T 2w6r_A 158 LRDWVVEVEKRGAGEILLTSIDRDGTK-SGYD--TEMIRFVRPLT-TLPIIA--SGGAGKMEHFLEAFLAGADAALAA 229 (266)
T ss_dssp HHHHHHHHHHTTCSEEEEEETTTTTTC-SCCC--HHHHHHHGGGC-CSCEEE--ESCCCSHHHHHHHHHHTCSEEEES
T ss_pred HHHHHHHHHHcCCCEEEEEeecCCCCc-CCCC--HHHHHHHHHHc-CCCEEE--eCCCCCHHHHHHHHHcCCHHHHcc
Confidence 455666777889999999875532211 1111 45666777653 445433 456667788888889999998775
No 204
>3l5l_A Xenobiotic reductase A; TIM barrel, oxidoreductase; HET: BU3 FMN; 1.03A {Pseudomonas putida} SCOP: c.1.4.0 PDB: 3l5m_A* 3n19_B* 3n16_A* 3l68_A* 3l67_A* 3l65_A* 3l66_A* 3n14_A* 2h8z_A* 2h90_A* 2h8x_A*
Probab=64.09 E-value=14 Score=34.28 Aligned_cols=77 Identities=16% Similarity=0.198 Sum_probs=51.0
Q ss_pred chhHHHHHHHHHhCCCcEEEEeccCCC---CCCCCcHHHHHHHHHHHHHhCCCcEEEEeecCCCCCHHHHHHHHHcC-CC
Q 018731 133 PMEPENTAKAIASWGVDYIVLTSVDRD---DIPDGGSGHFARTVKAMKKQKPDIMVECLTSDFRGDLRAVETLVHSG-LD 208 (351)
Q Consensus 133 ~eei~~~~~~~~~~G~~~I~ltgg~~~---~l~~~~~~~~~~li~~ik~~~p~i~i~~~~~~~~~~~e~l~~L~~aG-~~ 208 (351)
.++..+.++.+.+.|+..|.++++... ..+. +.....++++.+++.. ++.|- ..++..+.+.++.+.+.| +|
T Consensus 245 ~~~~~~la~~L~~~Gvd~i~vs~g~~~~~~~~~~-~~~~~~~~~~~ir~~~-~iPVi--~~GgI~s~e~a~~~l~~G~aD 320 (363)
T 3l5l_A 245 LEESIELARRFKAGGLDLLSVSVGFTIPDTNIPW-GPAFMGPIAERVRREA-KLPVT--SAWGFGTPQLAEAALQANQLD 320 (363)
T ss_dssp HHHHHHHHHHHHHTTCCEEEEEECCCSSCCCCCC-CTTTTHHHHHHHHHHH-TCCEE--ECSSTTSHHHHHHHHHTTSCS
T ss_pred HHHHHHHHHHHHHcCCCEEEEecCccccccccCC-CcchhHHHHHHHHHHc-CCcEE--EeCCCCCHHHHHHHHHCCCcc
Confidence 356677888889999999999875321 0111 1123456677777754 34443 345555788999988888 99
Q ss_pred eeecc
Q 018731 209 VFAHN 213 (351)
Q Consensus 209 ~i~~~ 213 (351)
.|.++
T Consensus 321 ~V~iG 325 (363)
T 3l5l_A 321 LVSVG 325 (363)
T ss_dssp EEECC
T ss_pred EEEec
Confidence 99876
No 205
>3vk5_A MOEO5; TIM barrel, transferase; HET: FPQ; 1.39A {Streptomyces ghanaensis} PDB: 3vka_A* 3vkb_A* 3vkc_A* 3vkd_A*
Probab=64.00 E-value=55 Score=29.25 Aligned_cols=67 Identities=18% Similarity=0.173 Sum_probs=47.6
Q ss_pred HHHHHHHHhCCCcEEEEeccCCCCCCCCcHHHHHHHHHHHHHhCC-CcEEEEeecCCCCCHHHHHHHHHcCCCeeecc
Q 018731 137 ENTAKAIASWGVDYIVLTSVDRDDIPDGGSGHFARTVKAMKKQKP-DIMVECLTSDFRGDLRAVETLVHSGLDVFAHN 213 (351)
Q Consensus 137 ~~~~~~~~~~G~~~I~ltgg~~~~l~~~~~~~~~~li~~ik~~~p-~i~i~~~~~~~~~~~e~l~~L~~aG~~~i~~~ 213 (351)
..-+......|.+-|+|-++.. . .-.++++.+++... ++.+.+ .+++.+.+.++.+.++|.|.|.+|
T Consensus 189 ~aYa~~gad~G~~lV~LD~~~~--~------v~~e~V~~I~~~~~~~iPV~v--GGGIrs~Eda~~ll~aGAD~VVVG 256 (286)
T 3vk5_A 189 DRYLHVARAFGFHMVYLYSRNE--H------VPPEVVRHFRKGLGPDQVLFV--SGNVRSGRQVTEYLDSGADYVGFA 256 (286)
T ss_dssp HHHHHHHHHTTCSEEEEECSSS--C------CCHHHHHHHHHHSCTTCEEEE--ESSCCSHHHHHHHHHTTCSEEEES
T ss_pred HHHHHHHHHcCCCEEEEcCCCC--c------CCHHHHHHHHHhcCCCCCEEE--EeCCCCHHHHHHHHHcCCCEEEEC
Confidence 4555666678988888865431 1 12467777777643 566654 456679999999999999999886
No 206
>4eiv_A Deoxyribose-phosphate aldolase; chemotherapy, brain cysts, bradyzoite, structural genomics, for structural genomics of infectious diseases; 1.37A {Toxoplasma gondii} PDB: 3qyq_A*
Probab=63.71 E-value=19 Score=32.36 Aligned_cols=149 Identities=11% Similarity=0.017 Sum_probs=79.1
Q ss_pred CcCcccCCCCCCCCCCchhHHHHHHHHHhCCCcEEEEeccCCCCCCC---CcHHHHHHHHHHHHHhCCCcEEEEe-ecCC
Q 018731 117 CRFCAVKTSRNPAPPDPMEPENTAKAIASWGVDYIVLTSVDRDDIPD---GGSGHFARTVKAMKKQKPDIMVECL-TSDF 192 (351)
Q Consensus 117 C~FC~~~~~~~~~~~~~eei~~~~~~~~~~G~~~I~ltgg~~~~l~~---~~~~~~~~li~~ik~~~p~i~i~~~-~~~~ 192 (351)
|+-+.||.+. .+.+....+++.+.+.|+++|-+.= +...+.. ++++.+.+-++.+++...+..+.+. -+..
T Consensus 87 ~tVigFP~G~----~~~e~K~~Ea~~Av~~GAdEIDmVi-nig~lk~~~~g~~~~V~~eI~~v~~a~~~~~lKVIlEt~~ 161 (297)
T 4eiv_A 87 CAAVNFPEGT----GTPDTVSLEAVGALKDGADEIECLI-DWRRMNENVADGESRIRLLVSEVKKVVGPKTLKVVLSGGE 161 (297)
T ss_dssp EEEESTTTCC----CCHHHHHHHHHHHHHTTCSEEEEEC-CTHHHHHCHHHHHHHHHHHHHHHHHHHTTSEEEEECCSSC
T ss_pred EEEecCCCCC----CCHHHHHHHHHHHHHcCCCEEEeee-eHHHHhcccCCcHHHHHHHHHHHHHHhcCCceEEEEeccc
Confidence 4445666543 2355556777788889999995531 1111222 3456677777777766445455542 2334
Q ss_pred CCCHHH----HHHHHHcCCCeeec--chhchHHHHhhhcCCCCCHHHHHHHHHHHHHh-------------------CCC
Q 018731 193 RGDLRA----VETLVHSGLDVFAH--NIETVKRLQRIVRDPRAGYEQSLEVLKHAKLS-------------------KKG 247 (351)
Q Consensus 193 ~~~~e~----l~~L~~aG~~~i~~--~ies~~~~~~~~r~~~~~~~~~l~~i~~~~~~-------------------~~G 247 (351)
+.+++. .+...++|.|.|-- |.. ..+.+.+++.-..+.+++. ...
T Consensus 162 Lt~~e~i~~A~~ia~~AGADFVKTSTGf~----------~~gAT~edV~lM~~~v~~~~~~~~~~~~~~~~~~~~~tg~~ 231 (297)
T 4eiv_A 162 LQGGDIISRAAVAALEGGADFLQTSSGLG----------ATHATMFTVHLISIALREYMVRENERIRVEGINREGAAVRC 231 (297)
T ss_dssp CCCHHHHHHHHHHHHHHTCSEEECCCSSS----------SCCCCHHHHHHHHHHHHHHHCC------------------C
T ss_pred CCcHHHHHHHHHHHHHhCCCEEEcCCCCC----------CCCCCHHHHHHHHHHHHHHhccccccccccccccccccCCc
Confidence 335552 35566889998832 110 0123443333333222210 012
Q ss_pred CeEEEeeeeeCCCCHHHHHHHHHHHHhCCCCEEee
Q 018731 248 LITKSSIMLGLGESDDDLKEAMADLRSIDVDILTL 282 (351)
Q Consensus 248 i~v~~~~IvGlgEt~e~~~~~l~~l~~lg~d~i~i 282 (351)
+.+++. +|=-.|.++..+.+..++++|.+++.-
T Consensus 232 vgvKAs--~GGIrt~e~A~~~i~~~~elG~~wl~~ 264 (297)
T 4eiv_A 232 IGIKIE--VGDVHMAETADFLMQMIFENGPRSIVR 264 (297)
T ss_dssp CEEEEE--CTTCCHHHHHHHHHHHHHHHCGGGCST
T ss_pred eeEEec--CCCCCCHHHHHHHHHHHHHhCccccCC
Confidence 222222 132367888999999888888876543
No 207
>3cqj_A L-ribulose-5-phosphate 3-epimerase ULAE; TIM-barrel, isomerase, phosphate-binding motif; 2.04A {Escherichia coli} PDB: 3cqi_A 3cqh_A 3cqk_A
Probab=63.58 E-value=46 Score=29.07 Aligned_cols=82 Identities=15% Similarity=0.217 Sum_probs=45.8
Q ss_pred HHHHHHHHHcCCCeeecchhchHHHHhhhcCCCCCHHHHHHHHHHHHHhCCCCeEEEeee-----eeCCC-C-------H
Q 018731 196 LRAVETLVHSGLDVFAHNIETVKRLQRIVRDPRAGYEQSLEVLKHAKLSKKGLITKSSIM-----LGLGE-S-------D 262 (351)
Q Consensus 196 ~e~l~~L~~aG~~~i~~~ies~~~~~~~~r~~~~~~~~~l~~i~~~~~~~~Gi~v~~~~I-----vGlgE-t-------~ 262 (351)
++.++.++++|++.|-+........... ...+.++.-+.-+.+.+ .|+.+.+--. +.++. . .
T Consensus 33 ~~~l~~~~~~G~~~iEl~~~~~~~~~~~---~~~~~~~~~~~~~~l~~--~gl~i~~~~~~~~~~~~l~~~d~~~r~~~~ 107 (295)
T 3cqj_A 33 LERLQLAKTLGFDFVEMSVDETDERLSR---LDWSREQRLALVNAIVE--TGVRVPSMCLSAHRRFPLGSEDDAVRAQGL 107 (295)
T ss_dssp HHHHHHHHHTTCSEEEEECCSSHHHHGG---GGCCHHHHHHHHHHHHH--HCCEEEEEEEGGGGTSCTTCSSHHHHHHHH
T ss_pred HHHHHHHHhcCCCEEEEecCCcccccCc---ccCCHHHHHHHHHHHHH--cCCeEEEEecCcccCCCCCCCCHHHHHHHH
Confidence 6788888888888887654332211110 02244444444455566 7887543211 11221 1 3
Q ss_pred HHHHHHHHHHHhCCCCEEee
Q 018731 263 DDLKEAMADLRSIDVDILTL 282 (351)
Q Consensus 263 e~~~~~l~~l~~lg~d~i~i 282 (351)
+.+.+.++.+.++|+..+.+
T Consensus 108 ~~~~~~i~~A~~lG~~~v~~ 127 (295)
T 3cqj_A 108 EIMRKAIQFAQDVGIRVIQL 127 (295)
T ss_dssp HHHHHHHHHHHHHTCCEEEE
T ss_pred HHHHHHHHHHHHcCCCEEEE
Confidence 45677777788888887766
No 208
>2p10_A MLL9387 protein; putative phosphonopyruvate hydrolase, structural genomics, J center for structural genomics, JCSG; HET: MSE; 2.15A {Mesorhizobium loti} SCOP: c.1.12.9
Probab=63.18 E-value=65 Score=28.75 Aligned_cols=105 Identities=17% Similarity=0.140 Sum_probs=66.9
Q ss_pred HHHHHHHHHHHHhCCCcEEEEeec---CCCCCHHHHHHHHHcCCCeeecchhch---HH-HHhhhcCCCCCHHHHHHHHH
Q 018731 167 GHFARTVKAMKKQKPDIMVECLTS---DFRGDLRAVETLVHSGLDVFAHNIETV---KR-LQRIVRDPRAGYEQSLEVLK 239 (351)
Q Consensus 167 ~~~~~li~~ik~~~p~i~i~~~~~---~~~~~~e~l~~L~~aG~~~i~~~ies~---~~-~~~~~r~~~~~~~~~l~~i~ 239 (351)
+...++.+++--...++.|-+... -+......++.|+++|+..+ +|.-|. |- ++..+-..+-++++-.+.|+
T Consensus 79 ~iv~e~~~evlp~v~~iPV~Agv~~~DP~~~~g~~Le~lk~~Gf~Gv-~N~ptvglidG~fr~~LEE~gm~~~~eve~I~ 157 (286)
T 2p10_A 79 QIVVDMAREVLPVVRHTPVLAGVNGTDPFMVMSTFLRELKEIGFAGV-QNFPTVGLIDGLFRQNLEETGMSYAQEVEMIA 157 (286)
T ss_dssp HHHHHHHHHHGGGCSSSCEEEEECTTCTTCCHHHHHHHHHHHTCCEE-EECSCGGGCCHHHHHHHHHTTCCHHHHHHHHH
T ss_pred HHHHHHHHhhhccCCCCCEEEEECCcCCCcCHHHHHHHHHHhCCceE-EECCCcccccchhhhhHhhcCCCHHHHHHHHH
Confidence 455677776665544555443221 23335688899999999998 665432 11 22211113679999999999
Q ss_pred HHHHhCCCCeEEEeeeeeCCCCHHHHHHHHHHHHhCCCCEEeee
Q 018731 240 HAKLSKKGLITKSSIMLGLGESDDDLKEAMADLRSIDVDILTLG 283 (351)
Q Consensus 240 ~~~~~~~Gi~v~~~~IvGlgEt~e~~~~~l~~l~~lg~d~i~i~ 283 (351)
++++ .|+.+.. +-.|.++..+. .++|+|.+-+.
T Consensus 158 ~A~~--~gL~Ti~-----~v~~~eeA~am----A~agpDiI~~h 190 (286)
T 2p10_A 158 EAHK--LDLLTTP-----YVFSPEDAVAM----AKAGADILVCH 190 (286)
T ss_dssp HHHH--TTCEECC-----EECSHHHHHHH----HHHTCSEEEEE
T ss_pred HHHH--CCCeEEE-----ecCCHHHHHHH----HHcCCCEEEEC
Confidence 9999 9996322 12466665443 57999998884
No 209
>1f76_A Dihydroorotate dehydrogenase; monomer, alpha-beta-barrel, FMN binding domain, orotate complex, oxidoreductase; HET: MSE FMN ORO; 2.50A {Bacteria} SCOP: c.1.4.1
Probab=62.96 E-value=15 Score=33.44 Aligned_cols=79 Identities=10% Similarity=0.097 Sum_probs=52.2
Q ss_pred chhHHHHHHHHHhCCCcEEEEeccCC--CCC-------CCC---c---HHHHHHHHHHHHHhCC-CcEEEEeecCCCCCH
Q 018731 133 PMEPENTAKAIASWGVDYIVLTSVDR--DDI-------PDG---G---SGHFARTVKAMKKQKP-DIMVECLTSDFRGDL 196 (351)
Q Consensus 133 ~eei~~~~~~~~~~G~~~I~ltgg~~--~~l-------~~~---~---~~~~~~li~~ik~~~p-~i~i~~~~~~~~~~~ 196 (351)
.+++.+.++.+.+.|++.|.++++.. .++ ..+ + .....+.++.+++..+ ++.|-. .++..+.
T Consensus 224 ~~~~~~~a~~l~~~Gvd~i~vsn~~~~~~~~~~~~~~~~~gg~~g~~~~~~~~~~i~~i~~~~~~~ipVi~--~GGI~~~ 301 (336)
T 1f76_A 224 EEELIQVADSLVRHNIDGVIATNTTLDRSLVQGMKNCDQTGGLSGRPLQLKSTEIIRRLSLELNGRLPIIG--VGGIDSV 301 (336)
T ss_dssp HHHHHHHHHHHHHTTCSEEEECCCBCCCTTSTTSTTTTCSSEEEEGGGHHHHHHHHHHHHHHHTTSSCEEE--ESSCCSH
T ss_pred HHHHHHHHHHHHHcCCcEEEEeCCcccccccccccccccCCCcCCchhHHHHHHHHHHHHHHhCCCCCEEE--ECCCCCH
Confidence 35777888888999999999976431 000 001 1 1234577888887643 455533 4566687
Q ss_pred HHHHHHHHcCCCeeecc
Q 018731 197 RAVETLVHSGLDVFAHN 213 (351)
Q Consensus 197 e~l~~L~~aG~~~i~~~ 213 (351)
+.+..+.++|.|.|.++
T Consensus 302 ~da~~~l~~GAd~V~ig 318 (336)
T 1f76_A 302 IAAREKIAAGASLVQIY 318 (336)
T ss_dssp HHHHHHHHHTCSEEEES
T ss_pred HHHHHHHHCCCCEEEee
Confidence 77777778999999876
No 210
>1oy0_A Ketopantoate hydroxymethyltransferase; domain swapping, structural genomics, PSI, protein structure initiative; 2.80A {Mycobacterium tuberculosis} SCOP: c.1.12.8
Probab=62.52 E-value=83 Score=28.04 Aligned_cols=121 Identities=13% Similarity=0.172 Sum_probs=0.0
Q ss_pred HHHHHhCCCcEEEEec--------cCCCCCCCCcHHHHHHHHHHHHHhCCCcEEEEeec--CCCCCHHH-----HHHHHH
Q 018731 140 AKAIASWGVDYIVLTS--------VDRDDIPDGGSGHFARTVKAMKKQKPDIMVECLTS--DFRGDLRA-----VETLVH 204 (351)
Q Consensus 140 ~~~~~~~G~~~I~ltg--------g~~~~l~~~~~~~~~~li~~ik~~~p~i~i~~~~~--~~~~~~e~-----l~~L~~ 204 (351)
++.+.+.|++-| ++| |.++.++ -.++.+....+.+.+-.+..-|.+=.| ++..+.+. .+.+++
T Consensus 47 A~l~e~aG~d~i-lvGdSl~~~~lG~~dt~~-vTldemi~h~~aV~r~~~~~~vvaD~pfgsy~~s~~~a~~na~rl~~e 124 (281)
T 1oy0_A 47 ARIFDEAGIPVL-LVGDSAANVVYGYDTTVP-ISIDELIPLVRGVVRGAPHALVVADLPFGSYEAGPTAALAAATRFLKD 124 (281)
T ss_dssp HHHHHTTTCCEE-EECTTHHHHTTCCSSSSS-CCGGGTHHHHHHHHHHCTTSEEEEECCTTSSTTCHHHHHHHHHHHHHT
T ss_pred HHHHHHcCCCEE-EECHHHHHHHcCCCCCCC-CCHHHHHHHHHHHHhcCCCCeEEEECCCCcccCCHHHHHHHHHHHHHH
Q ss_pred cCCCeeecchhchHHHHhhhcCCCCCHHHHHHHHHHHHHhCCCCeEEEeeeeeC-CCCH---------------HHHHHH
Q 018731 205 SGLDVFAHNIETVKRLQRIVRDPRAGYEQSLEVLKHAKLSKKGLITKSSIMLGL-GESD---------------DDLKEA 268 (351)
Q Consensus 205 aG~~~i~~~ies~~~~~~~~r~~~~~~~~~l~~i~~~~~~~~Gi~v~~~~IvGl-gEt~---------------e~~~~~ 268 (351)
+|++.| +-.+-++..+.|+.+.+ .|+.|..+ +|| .++. +++.+-
T Consensus 125 aGa~aV----------------klEdg~e~~~~I~al~~--agIpV~gH--iGLtPqsv~~~ggf~v~grt~~a~~~i~r 184 (281)
T 1oy0_A 125 GGAHAV----------------KLEGGERVAEQIACLTA--AGIPVMAH--IGFTPQSVNTLGGFRVQGRGDAAEQTIAD 184 (281)
T ss_dssp TCCSEE----------------EEEBSGGGHHHHHHHHH--HTCCEEEE--EECCC--------------CHHHHHHHHH
T ss_pred hCCeEE----------------EECCcHHHHHHHHHHHH--CCCCEEee--ecCCcceecccCCeEEEeCcHHHHHHHHH
Q ss_pred HHHHHhCCCCEEee
Q 018731 269 MADLRSIDVDILTL 282 (351)
Q Consensus 269 l~~l~~lg~d~i~i 282 (351)
.+.+.+.|.+.+.+
T Consensus 185 A~a~~eAGA~~ivl 198 (281)
T 1oy0_A 185 AIAVAEAGAFAVVM 198 (281)
T ss_dssp HHHHHHHTCSEEEE
T ss_pred HHHHHHcCCcEEEE
No 211
>1vp8_A Hypothetical protein AF0103; putative pyruvate kinase, structural genomics, joint center structural genomics, JCSG; HET: MSE FMN; 1.30A {Archaeoglobus fulgidus} SCOP: c.49.1.2
Probab=62.47 E-value=47 Score=27.94 Aligned_cols=94 Identities=17% Similarity=0.229 Sum_probs=55.0
Q ss_pred CchhHHHHH-HHHHhCCCcEEEEeccCCCCCCCCcHHHHHHHHHHHHHhCCCcEEEEee--cCC------CCCHHHHHHH
Q 018731 132 DPMEPENTA-KAIASWGVDYIVLTSVDRDDIPDGGSGHFARTVKAMKKQKPDIMVECLT--SDF------RGDLRAVETL 202 (351)
Q Consensus 132 ~~eei~~~~-~~~~~~G~~~I~ltgg~~~~l~~~~~~~~~~li~~ik~~~p~i~i~~~~--~~~------~~~~e~l~~L 202 (351)
..++.++.+ +.+.+.|++.|++.+-.. +.-..+++.+ .++.+-+.+ .+| .+++|..+.|
T Consensus 27 NT~~tl~la~era~e~~Ik~iVVAS~sG--------~TA~k~~e~~----~~i~lVvVTh~~GF~~pg~~e~~~e~~~~L 94 (201)
T 1vp8_A 27 NTEETLRLAVERAKELGIKHLVVASSYG--------DTAMKALEMA----EGLEVVVVTYHTGFVREGENTMPPEVEEEL 94 (201)
T ss_dssp GHHHHHHHHHHHHHHHTCCEEEEECSSS--------HHHHHHHHHC----TTCEEEEEECCTTSSSTTCCSSCHHHHHHH
T ss_pred cHHHHHHHHHHHHHHcCCCEEEEEeCCC--------hHHHHHHHHh----cCCeEEEEeCcCCCCCCCCCcCCHHHHHHH
Confidence 345555544 455678999999966443 1223333333 356655544 122 2478999999
Q ss_pred HHcCCCeee--cchhchHH-HHhhhcCCCCCHHH-HHHHHH
Q 018731 203 VHSGLDVFA--HNIETVKR-LQRIVRDPRAGYEQ-SLEVLK 239 (351)
Q Consensus 203 ~~aG~~~i~--~~ies~~~-~~~~~r~~~~~~~~-~l~~i~ 239 (351)
.+.|+..+. |-+-++++ +.+.+. +...-+ +-++++
T Consensus 95 ~~~G~~V~t~tH~lsgveR~is~kfG--G~~p~eiiA~tLR 133 (201)
T 1vp8_A 95 RKRGAKIVRQSHILSGLERSISRKLG--GVSRTEAIAEALR 133 (201)
T ss_dssp HHTTCEEEECCCTTTTTHHHHHHHTC--CCCHHHHHHHHHH
T ss_pred HhCCCEEEEEeccccchhHHHHHhcC--CCCHHHHHHHHHH
Confidence 999999886 34444555 445553 334434 446666
No 212
>2w6r_A Imidazole glycerol phosphate synthase subunit HISF; lyase, fusion protein, cobalamin, precorrin, novel fold, VIT; 2.10A {Thermotoga maritima}
Probab=62.29 E-value=13 Score=32.56 Aligned_cols=76 Identities=17% Similarity=0.179 Sum_probs=51.1
Q ss_pred hhHHHHHHHHHhCCCcEEEEeccCCCCCCCCcHHHHHHHHHHHHHhCCCcEEEEeecCCCCCHHHHHHHHHcCCCeeecc
Q 018731 134 MEPENTAKAIASWGVDYIVLTSVDRDDIPDGGSGHFARTVKAMKKQKPDIMVECLTSDFRGDLRAVETLVHSGLDVFAHN 213 (351)
Q Consensus 134 eei~~~~~~~~~~G~~~I~ltgg~~~~l~~~~~~~~~~li~~ik~~~p~i~i~~~~~~~~~~~e~l~~L~~aG~~~i~~~ 213 (351)
.++.+.++.+.+.|+..|.++..+.+.... ....++++.+++.. ++.+-+ .++..+.+.++.+.++|++.+.++
T Consensus 30 ~~~~~~a~~~~~~Ga~~i~v~d~~~~~~~~---g~~~~~i~~i~~~~-~iPvi~--~ggi~~~~~i~~~~~~Gad~v~lg 103 (266)
T 2w6r_A 30 ILLRDWVVEVEKRGAGEILLTSIDRDGTKS---GYDTEMIRFVRPLT-TLPIIA--SGGAGKMEHFLEAFLAGADKALAA 103 (266)
T ss_dssp EEHHHHHHHHHHHTCSEEEEEETTTSSCSS---CCCHHHHHHHGGGC-CSCEEE--ESCCCSTHHHHHHHHHTCSEEECC
T ss_pred CCHHHHHHHHHHCCCCEEEEEecCcccCCC---cccHHHHHHHHHhc-CCCEEE--ECCCCCHHHHHHHHHcCCcHhhhh
Confidence 456778888888999999997654321111 12356677777653 455543 345557788889999999999876
Q ss_pred hh
Q 018731 214 IE 215 (351)
Q Consensus 214 ie 215 (351)
-.
T Consensus 104 ~~ 105 (266)
T 2w6r_A 104 SV 105 (266)
T ss_dssp CC
T ss_pred HH
Confidence 43
No 213
>3cu2_A Ribulose-5-phosphate 3-epimerase; YP_718263.1, ribulose-PHOS epimerase family, structural genomics, joint center for STR genomics, JCSG; 1.91A {Haemophilus somnus}
Probab=62.16 E-value=11 Score=32.94 Aligned_cols=76 Identities=11% Similarity=0.165 Sum_probs=48.3
Q ss_pred CchhHHHHHHHHHhCCCcEEEE--eccC-CCCCCCCcHHHHHHHHHHHHHhCCCcEEEEeecCCCCCHHHHHHHHHcCCC
Q 018731 132 DPMEPENTAKAIASWGVDYIVL--TSVD-RDDIPDGGSGHFARTVKAMKKQKPDIMVECLTSDFRGDLRAVETLVHSGLD 208 (351)
Q Consensus 132 ~~eei~~~~~~~~~~G~~~I~l--tgg~-~~~l~~~~~~~~~~li~~ik~~~p~i~i~~~~~~~~~~~e~l~~L~~aG~~ 208 (351)
+...+.+.++.+.+.|++.+.+ -.|. .+.+.- + .++++.+++..+. .++....+ .+..++.+.++|.|
T Consensus 24 D~~~l~~~i~~~~~~gad~lhvDvmDG~fvpn~t~-G----~~~v~~lr~~~~~-DvhLMv~~---p~~~i~~~~~aGAd 94 (237)
T 3cu2_A 24 NWLQLNEEVTTLLENQINVLHFDIADGQFSSLFTV-G----AIGIKYFPTHCFK-DVHLMVRN---QLEVAKAVVANGAN 94 (237)
T ss_dssp CGGGHHHHHHHHHHTTCCEEEEEEEBSSSSSCBCB-C----THHHHTSCTTSEE-EEEEECSC---HHHHHHHHHHTTCS
T ss_pred CcccHHHHHHHHHHcCCCEEEEEEecCccccchhh-h----HHHHHHHhhhCCC-CeEEEEEC---HHHHHHHHHHcCCC
Confidence 4456677788888889887644 2333 122321 1 2567777765432 55554332 35789999999999
Q ss_pred eeecchhc
Q 018731 209 VFAHNIET 216 (351)
Q Consensus 209 ~i~~~ies 216 (351)
.+.+..|+
T Consensus 95 ~itvH~ea 102 (237)
T 3cu2_A 95 LVTLQLEQ 102 (237)
T ss_dssp EEEEETTC
T ss_pred EEEEecCC
Confidence 99887665
No 214
>3hgj_A Chromate reductase; TIM barrel, oxidoreductase; HET: FMN; 2.00A {Thermus scotoductus} SCOP: c.1.4.0 PDB: 3hf3_A*
Probab=61.83 E-value=31 Score=31.66 Aligned_cols=78 Identities=19% Similarity=0.191 Sum_probs=51.6
Q ss_pred CchhHHHHHHHHHhCCCcEEEEecc-CCCC--CCCCcHHHHHHHHHHHHHhCCCcEEEEeecCCCCCHHHHHHHHHcC-C
Q 018731 132 DPMEPENTAKAIASWGVDYIVLTSV-DRDD--IPDGGSGHFARTVKAMKKQKPDIMVECLTSDFRGDLRAVETLVHSG-L 207 (351)
Q Consensus 132 ~~eei~~~~~~~~~~G~~~I~ltgg-~~~~--l~~~~~~~~~~li~~ik~~~p~i~i~~~~~~~~~~~e~l~~L~~aG-~ 207 (351)
+.++..+.++.+.+.|+..|.++.| .... .+. +.....++++.+++.. ++.|- ..++..+.+.++.+.+.| +
T Consensus 237 ~~~~~~~la~~L~~~Gvd~i~vs~g~~~~~~~~~~-~~~~~~~~~~~ir~~~-~iPVi--~~Ggi~t~e~a~~~l~~G~a 312 (349)
T 3hgj_A 237 SLEDTLAFARRLKELGVDLLDCSSGGVVLRVRIPL-APGFQVPFADAVRKRV-GLRTG--AVGLITTPEQAETLLQAGSA 312 (349)
T ss_dssp CHHHHHHHHHHHHHTTCCEEEEECCCSCSSSCCCC-CTTTTHHHHHHHHHHH-CCEEE--ECSSCCCHHHHHHHHHTTSC
T ss_pred CHHHHHHHHHHHHHcCCCEEEEecCCcCcccccCC-CccccHHHHHHHHHHc-CceEE--EECCCCCHHHHHHHHHCCCc
Confidence 4567788888999999999998743 2111 111 1123456777777753 44543 345555788888888888 9
Q ss_pred Ceeecc
Q 018731 208 DVFAHN 213 (351)
Q Consensus 208 ~~i~~~ 213 (351)
|.|.++
T Consensus 313 D~V~iG 318 (349)
T 3hgj_A 313 DLVLLG 318 (349)
T ss_dssp SEEEES
T ss_pred eEEEec
Confidence 999876
No 215
>1fob_A Beta-1,4-galactanase; B/A barrel, glycosyl hydrolase, family 53, CLAN GH-A; 1.80A {Aspergillus aculeatus} SCOP: c.1.8.3 PDB: 1fhl_A
Probab=61.48 E-value=34 Score=31.16 Aligned_cols=54 Identities=19% Similarity=0.228 Sum_probs=40.2
Q ss_pred CHHHHHHHHHcCCCeeecchhchHHHHhhhcCCCCCHHHHHHHHHHHHHhCCCCeEEEeeee
Q 018731 195 DLRAVETLVHSGLDVFAHNIETVKRLQRIVRDPRAGYEQSLEVLKHAKLSKKGLITKSSIML 256 (351)
Q Consensus 195 ~~e~l~~L~~aG~~~i~~~ies~~~~~~~~r~~~~~~~~~l~~i~~~~~~~~Gi~v~~~~Iv 256 (351)
..+.++.|+++|++.|-+.+. .++. +...+.+..++.++.+++ .||++-.++-+
T Consensus 29 ~~~~~~ilk~~G~n~vRlri~-v~P~-----~g~~d~~~~~~~~~~ak~--~Gl~v~ld~hy 82 (334)
T 1fob_A 29 TQALETILADAGINSIRQRVW-VNPS-----DGSYDLDYNLELAKRVKA--AGMSLYLDLHL 82 (334)
T ss_dssp BCCHHHHHHHHTCCEEEEEEC-SCCT-----TCTTCHHHHHHHHHHHHH--TTCEEEEEECC
T ss_pred CchHHHHHHHcCCCEEEEEEE-ECCC-----CCccCHHHHHHHHHHHHH--CCCEEEEEecc
Confidence 346789999999999976432 1110 113578999999999999 99998888755
No 216
>3ngj_A Deoxyribose-phosphate aldolase; lyase, structural genomics, structural genomics center for infectious disease, ssgcid; 1.70A {Entamoeba histolytica}
Probab=61.17 E-value=17 Score=31.67 Aligned_cols=132 Identities=11% Similarity=0.041 Sum_probs=71.3
Q ss_pred chhHHHHHHHHHhCCCcEEEEeccCCCCCCCCcHHHHHHHHHHHHHhCCCcEEEEeecCCCCCHHHHHHH----HHcCCC
Q 018731 133 PMEPENTAKAIASWGVDYIVLTSVDRDDIPDGGSGHFARTVKAMKKQKPDIMVECLTSDFRGDLRAVETL----VHSGLD 208 (351)
Q Consensus 133 ~eei~~~~~~~~~~G~~~I~ltgg~~~~l~~~~~~~~~~li~~ik~~~p~i~i~~~~~~~~~~~e~l~~L----~~aG~~ 208 (351)
.+.-..+++++.+.|.++|-+.= +...+.+++++.+.+-++.+++...+..+.+.-....++++.+... .++|.|
T Consensus 94 ~~~Kv~Ea~~Ai~~GAdEIDmVi-Nig~lk~g~~~~v~~eI~~v~~a~~~~~lKVIlEt~~Lt~eei~~a~~ia~~aGAD 172 (239)
T 3ngj_A 94 SEVKAYETKVAVEQGAEEVDMVI-NIGMVKAKKYDDVEKDVKAVVDASGKALTKVIIECCYLTNEEKVEVCKRCVAAGAE 172 (239)
T ss_dssp HHHHHHHHHHHHHTTCSEEEEEC-CHHHHHTTCHHHHHHHHHHHHHHHTTSEEEEECCGGGSCHHHHHHHHHHHHHHTCS
T ss_pred hHHHHHHHHHHHHcCCCEEEEEe-ehHHhccccHHHHHHHHHHHHHHhcCCceEEEEecCCCCHHHHHHHHHHHHHHCcC
Confidence 45456677778888999985531 1111233445677777777776644444443222223577666665 788999
Q ss_pred eeecchhchHHHHhhhcCCCCCHHHHHHHHHHHHHhCCCCeEEEeeeeeCCCCHHHHHHHHHHHHhCCCCEEeee
Q 018731 209 VFAHNIETVKRLQRIVRDPRAGYEQSLEVLKHAKLSKKGLITKSSIMLGLGESDDDLKEAMADLRSIDVDILTLG 283 (351)
Q Consensus 209 ~i~~~ies~~~~~~~~r~~~~~~~~~l~~i~~~~~~~~Gi~v~~~~IvGlgEt~e~~~~~l~~l~~lg~d~i~i~ 283 (351)
.|--+- . ....+.+++++. .++.... ..+.+++. |=-.|.++..+.+ ++|.+.+..+
T Consensus 173 fVKTST--G------f~~ggAt~~dv~-lmr~~vg--~~v~VKas---GGIrt~~da~~~i----~aGA~riGtS 229 (239)
T 3ngj_A 173 YVKTST--G------FGTHGATPEDVK-LMKDTVG--DKALVKAA---GGIRTFDDAMKMI----NNGASRIGAS 229 (239)
T ss_dssp EEECCC--S------SSSCCCCHHHHH-HHHHHHG--GGSEEEEE---SSCCSHHHHHHHH----HTTEEEEEES
T ss_pred EEECCC--C------CCCCCCCHHHHH-HHHHhhC--CCceEEEe---CCCCCHHHHHHHH----Hhcccceecc
Confidence 884320 0 001245665433 3333333 34444332 2124566665554 6888877663
No 217
>2y88_A Phosphoribosyl isomerase A; aromatic amino acid biosynthesis, TIM-barrel, His biosynthesis, tryptophan biosynthesis; HET: 2ER; 1.33A {Mycobacterium tuberculosis} PDB: 2y89_A 2y85_A*
Probab=61.13 E-value=13 Score=32.06 Aligned_cols=73 Identities=15% Similarity=0.163 Sum_probs=49.0
Q ss_pred hHHHHHHHHHhCCCcEEEEeccCCCCCCCCcHHHHHHHHHHHHHhCCCcEEEEeecCCCCCHHHHHHHHHc---CCCeee
Q 018731 135 EPENTAKAIASWGVDYIVLTSVDRDDIPDGGSGHFARTVKAMKKQKPDIMVECLTSDFRGDLRAVETLVHS---GLDVFA 211 (351)
Q Consensus 135 ei~~~~~~~~~~G~~~I~ltgg~~~~l~~~~~~~~~~li~~ik~~~p~i~i~~~~~~~~~~~e~l~~L~~a---G~~~i~ 211 (351)
...+.++.+.+.|+..|.+++.+++.... +. -.++++.+++. .++.|-+ .++..+.+.+..+.++ |++.+.
T Consensus 150 ~~~e~~~~~~~~G~~~i~~~~~~~~~~~~-g~--~~~~~~~l~~~-~~ipvia--~GGI~~~~d~~~~~~~~~~Gad~v~ 223 (244)
T 2y88_A 150 DLWDVLERLDSEGCSRFVVTDITKDGTLG-GP--NLDLLAGVADR-TDAPVIA--SGGVSSLDDLRAIATLTHRGVEGAI 223 (244)
T ss_dssp EHHHHHHHHHHTTCCCEEEEETTTTTTTS-CC--CHHHHHHHHTT-CSSCEEE--ESCCCSHHHHHHHHTTGGGTEEEEE
T ss_pred CHHHHHHHHHhCCCCEEEEEecCCccccC-CC--CHHHHHHHHHh-CCCCEEE--ECCCCCHHHHHHHHhhccCCCCEEE
Confidence 45667777788899999999876532211 11 13455666654 2455543 5566677888999998 999987
Q ss_pred cc
Q 018731 212 HN 213 (351)
Q Consensus 212 ~~ 213 (351)
++
T Consensus 224 vG 225 (244)
T 2y88_A 224 VG 225 (244)
T ss_dssp EC
T ss_pred Ec
Confidence 75
No 218
>3gr7_A NADPH dehydrogenase; flavin, FMN, beta-alpha-barrel, oxidoreductase, flavoprotein; HET: FMN; 2.30A {Geobacillus kaustophilus} PDB: 3gr8_A*
Probab=61.00 E-value=41 Score=30.75 Aligned_cols=86 Identities=15% Similarity=0.146 Sum_probs=50.7
Q ss_pred HHHHHHHHcCCCeeecchhc---hHHHH-hhh--c-C-CCCCHHHH----HHHHHHHHHhCCCCeEEEeeeee----CCC
Q 018731 197 RAVETLVHSGLDVFAHNIET---VKRLQ-RIV--R-D-PRAGYEQS----LEVLKHAKLSKKGLITKSSIMLG----LGE 260 (351)
Q Consensus 197 e~l~~L~~aG~~~i~~~ies---~~~~~-~~~--r-~-~~~~~~~~----l~~i~~~~~~~~Gi~v~~~~IvG----lgE 260 (351)
+.++..+++|+|.|-++.-- ++++. ... | | -+.+.+.+ ++.++.+++.. ++.|..-+=.+ -|.
T Consensus 148 ~aA~~a~~aGfDgVEih~a~GyLl~qFlsp~~N~R~D~yGGslenR~r~~~eiv~avr~~v-~~pv~vRls~~~~~~~g~ 226 (340)
T 3gr7_A 148 NGARRAKEAGFDVIEIHAAHGYLINEFLSPLSNRRQDEYGGSPENRYRFLGEVIDAVREVW-DGPLFVRISASDYHPDGL 226 (340)
T ss_dssp HHHHHHHHHTCSEEEEEECTTCHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHC-CSCEEEEEESCCCSTTSC
T ss_pred HHHHHHHHcCCCEEEEccccchHHHHcCCCccCcCCCcccCCHHHHHHHHHHHHHHHHHhc-CCceEEEeccccccCCCC
Confidence 45667788999999765321 12221 111 0 0 13455543 55666666533 44332222111 156
Q ss_pred CHHHHHHHHHHHHhCCCCEEeee
Q 018731 261 SDDDLKEAMADLRSIDVDILTLG 283 (351)
Q Consensus 261 t~e~~~~~l~~l~~lg~d~i~i~ 283 (351)
+.++..+.++.+.+.|+|.+++.
T Consensus 227 ~~~~~~~la~~L~~~Gvd~i~vs 249 (340)
T 3gr7_A 227 TAKDYVPYAKRMKEQGVDLVDVS 249 (340)
T ss_dssp CGGGHHHHHHHHHHTTCCEEEEE
T ss_pred CHHHHHHHHHHHHHcCCCEEEEe
Confidence 78899999999999999999985
No 219
>3qc0_A Sugar isomerase; TIM barrel, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-biology,; HET: UNL PG4; 1.45A {Sinorhizobium meliloti} PDB: 3ju2_A
Probab=61.00 E-value=47 Score=28.40 Aligned_cols=74 Identities=19% Similarity=0.230 Sum_probs=39.1
Q ss_pred HHHHHHHHHcCCCeeecchhchHHHHhhhcCCCCCHHHHHHHHHHHHHhCCCCeEEEeeeee-C-CCC-------HHHHH
Q 018731 196 LRAVETLVHSGLDVFAHNIETVKRLQRIVRDPRAGYEQSLEVLKHAKLSKKGLITKSSIMLG-L-GES-------DDDLK 266 (351)
Q Consensus 196 ~e~l~~L~~aG~~~i~~~ies~~~~~~~~r~~~~~~~~~l~~i~~~~~~~~Gi~v~~~~IvG-l-gEt-------~e~~~ 266 (351)
++.++.++++|++.|-+.... +. ..+.++..+ .+.+ .|+.+.+....+ + ... .+.+.
T Consensus 21 ~~~l~~~~~~G~~~vEl~~~~---~~------~~~~~~~~~---~l~~--~gl~~~~~~~~~~~~~~d~~~r~~~~~~~~ 86 (275)
T 3qc0_A 21 AEAVDICLKHGITAIAPWRDQ---VA------AIGLGEAGR---IVRA--NGLKLTGLCRGGFFPAPDASGREKAIDDNR 86 (275)
T ss_dssp HHHHHHHHHTTCCEEECBHHH---HH------HHCHHHHHH---HHHH--HTCEESCEEEEECCCCSSHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCCEEEecccc---cc------ccCHHHHHH---HHHH--cCCceEEeecCCCcCCCCHHHHHHHHHHHH
Confidence 577788888888877654321 11 112333333 3344 677643322222 2 211 24566
Q ss_pred HHHHHHHhCCCCEEeee
Q 018731 267 EAMADLRSIDVDILTLG 283 (351)
Q Consensus 267 ~~l~~l~~lg~d~i~i~ 283 (351)
+.++.+.++|+..+.+.
T Consensus 87 ~~i~~a~~lG~~~v~~~ 103 (275)
T 3qc0_A 87 RAVDEAAELGADCLVLV 103 (275)
T ss_dssp HHHHHHHHTTCSCEEEE
T ss_pred HHHHHHHHhCCCEEEEe
Confidence 67777777787776663
No 220
>1aw2_A Triosephosphate isomerase; psychrophilic, vibrio marinus; 2.65A {Moritella marina} SCOP: c.1.1.1 PDB: 1aw1_A
Probab=60.91 E-value=65 Score=28.31 Aligned_cols=56 Identities=21% Similarity=0.142 Sum_probs=38.6
Q ss_pred HHHHHHHcCCCeeecchhchHHHHhhhcCCCCCHHHHHHHHHHHHHhCCCCeEEEeeeeeCCCCHHHH
Q 018731 198 AVETLVHSGLDVFAHNIETVKRLQRIVRDPRAGYEQSLEVLKHAKLSKKGLITKSSIMLGLGESDDDL 265 (351)
Q Consensus 198 ~l~~L~~aG~~~i~~~ies~~~~~~~~r~~~~~~~~~l~~i~~~~~~~~Gi~v~~~~IvGlgEt~e~~ 265 (351)
-...|+++|++.+-+|- ..+|.+- +.+-+.+-+.++.+.+ .|+. .|+..|||.++.
T Consensus 81 S~~mL~d~G~~~ViiGH----SERR~~f--~Etd~~v~~Kv~~Al~--~GL~----pI~CvGEtleer 136 (256)
T 1aw2_A 81 SPAMLKEFGATHIIIGH----SERREYH--AESDEFVAKKFAFLKE--NGLT----PVLCIGESDAQN 136 (256)
T ss_dssp CHHHHHHHTCCEEEESC----HHHHHHS--CCCHHHHHHHHHHHHH--HTCE----EEEEECCCHHHH
T ss_pred CHHHHHHcCCCEEEECc----hhhcccc--CCCHHHHHHHHHHHHH--CCCE----EEEEcCCcHHHH
Confidence 35678889999988762 2223332 4566677777888888 8886 356669998873
No 221
>3ngf_A AP endonuclease, family 2; structural genomics, seattle structural genomics center for infectious disease, ssgcid, TIM barrel; 1.80A {Brucella melitensis biovar abortus} SCOP: c.1.15.0
Probab=60.78 E-value=34 Score=29.52 Aligned_cols=43 Identities=14% Similarity=-0.032 Sum_probs=21.0
Q ss_pred HHHHHHHHHHhCCCcEEEEeecCCCCCHHHHHHHHHcCCCeeec
Q 018731 169 FARTVKAMKKQKPDIMVECLTSDFRGDLRAVETLVHSGLDVFAH 212 (351)
Q Consensus 169 ~~~li~~ik~~~p~i~i~~~~~~~~~~~e~l~~L~~aG~~~i~~ 212 (351)
+.+.++.+++..-+ .|++..+....-.+..+.+.+.|+....+
T Consensus 25 ~~~~l~~~~~~G~~-~vEl~~~~~~~~~~~~~~l~~~gl~~~~~ 67 (269)
T 3ngf_A 25 FLERFRLAAEAGFG-GVEFLFPYDFDADVIARELKQHNLTQVLF 67 (269)
T ss_dssp HHHHHHHHHHTTCS-EEECSCCTTSCHHHHHHHHHHTTCEEEEE
T ss_pred HHHHHHHHHHcCCC-EEEecCCccCCHHHHHHHHHHcCCcEEEE
Confidence 55566666665211 45543332221234455566667665543
No 222
>2ovl_A Putative racemase; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.13A {Streptomyces coelicolor A3} PDB: 3ck5_A
Probab=60.52 E-value=1e+02 Score=28.26 Aligned_cols=148 Identities=11% Similarity=0.011 Sum_probs=81.1
Q ss_pred CchhHHHHHHHHHhCCCcEEEEeccCCCCCCCCcHHHHHHHHHHHHHhC-CCcEEEEeecCCCCCH----HHHHHHHHcC
Q 018731 132 DPMEPENTAKAIASWGVDYIVLTSVDRDDIPDGGSGHFARTVKAMKKQK-PDIMVECLTSDFRGDL----RAVETLVHSG 206 (351)
Q Consensus 132 ~~eei~~~~~~~~~~G~~~I~ltgg~~~~l~~~~~~~~~~li~~ik~~~-p~i~i~~~~~~~~~~~----e~l~~L~~aG 206 (351)
++++..+.++.+.+.|++.+-+-.|.+ ..+.-.+.++++++.. +++.+.+=.+... +. +.++.|.+.|
T Consensus 146 ~~e~~~~~a~~~~~~Gf~~iKik~g~~------~~~~~~e~v~avr~a~G~d~~l~vDan~~~-~~~~a~~~~~~l~~~~ 218 (371)
T 2ovl_A 146 PVADLKTQADRFLAGGFRAIKMKVGRP------DLKEDVDRVSALREHLGDSFPLMVDANMKW-TVDGAIRAARALAPFD 218 (371)
T ss_dssp CHHHHHHHHHHHHHTTCSCEEEECCCS------SHHHHHHHHHHHHHHHCTTSCEEEECTTCS-CHHHHHHHHHHHGGGC
T ss_pred CHHHHHHHHHHHHHcCCCEEEECCCCC------CHHHHHHHHHHHHHHhCCCCeEEEECCCCC-CHHHHHHHHHHHHhcC
Confidence 567787888888889999888765542 1356678888888864 5655443223332 43 4556666778
Q ss_pred CCeeecchhchHHHHhhhcCCCCCHHHHHHHHHHHHHhCCCCeEEEeeeeeCCCCHHHHHHHHHHHHhCCCCEEeeeccc
Q 018731 207 LDVFAHNIETVKRLQRIVRDPRAGYEQSLEVLKHAKLSKKGLITKSSIMLGLGESDDDLKEAMADLRSIDVDILTLGQYL 286 (351)
Q Consensus 207 ~~~i~~~ies~~~~~~~~r~~~~~~~~~l~~i~~~~~~~~Gi~v~~~~IvGlgEt~e~~~~~l~~l~~lg~d~i~i~~~l 286 (351)
++.|- - ++ +..++ +.++.+++. .++.+.+ +|+..+..+..+.+..-.+|.+.+.
T Consensus 219 i~~iE----q--P~------~~~d~----~~~~~l~~~-~~iPI~~------dE~~~~~~~~~~~i~~~~~d~v~ik--- 272 (371)
T 2ovl_A 219 LHWIE----E--PT------IPDDL----VGNARIVRE-SGHTIAG------GENLHTLYDFHNAVRAGSLTLPEPD--- 272 (371)
T ss_dssp CSEEE----C--CS------CTTCH----HHHHHHHHH-HCSCEEE------CTTCCSHHHHHHHHHHTCCSEECCC---
T ss_pred CCEEE----C--CC------CcccH----HHHHHHHhh-CCCCEEe------CCCCCCHHHHHHHHHcCCCCEEeeC---
Confidence 77652 1 11 12233 233333321 2343322 3433333333444556667776662
Q ss_pred CCCCCcccccCCCCHHHHHHHHHHHHhcCcceec
Q 018731 287 QPTPLHLTVKEYVTPEKFDFWKAYGESIGFRYVA 320 (351)
Q Consensus 287 ~PTp~~~~~~~~v~~~e~~~~~~~~~~~G~~~~~ 320 (351)
++.. =...+..++.++++..|...+.
T Consensus 273 -~~~~-------GGi~~~~~i~~~A~~~gi~~~~ 298 (371)
T 2ovl_A 273 -VSNI-------GGYTTFRKVAALAEANNMLLTS 298 (371)
T ss_dssp -TTTT-------TSHHHHHHHHHHHHHTTCCEEE
T ss_pred -cccc-------CCHHHHHHHHHHHHHcCCeEcc
Confidence 2211 1244667777777777776544
No 223
>1vzw_A Phosphoribosyl isomerase A; histidine biosynthesis, tryptophan biosynthesis; 1.8A {Streptomyces coelicolor} SCOP: c.1.2.1 PDB: 2vep_A 2x30_A
Probab=60.05 E-value=12 Score=32.33 Aligned_cols=90 Identities=19% Similarity=0.146 Sum_probs=54.1
Q ss_pred hHHHHHHHHHhCCCcEEEEeccCCCCCCCCcHHHHHHHHHHHHHhCCCcEEEEeecCCCCCHHHHHHHHHc---CCCeee
Q 018731 135 EPENTAKAIASWGVDYIVLTSVDRDDIPDGGSGHFARTVKAMKKQKPDIMVECLTSDFRGDLRAVETLVHS---GLDVFA 211 (351)
Q Consensus 135 ei~~~~~~~~~~G~~~I~ltgg~~~~l~~~~~~~~~~li~~ik~~~p~i~i~~~~~~~~~~~e~l~~L~~a---G~~~i~ 211 (351)
...+.++.+.+.|+..|.+++.+++... .+ .-.++++.+++.. ++.+-+ .++..+.+.+..+.++ |++.+.
T Consensus 147 ~~~e~~~~~~~~G~~~i~~~~~~~~~~~-~g--~~~~~~~~i~~~~-~ipvia--~GGI~~~~d~~~~~~~~~~Gadgv~ 220 (244)
T 1vzw_A 147 DLYETLDRLNKEGCARYVVTDIAKDGTL-QG--PNLELLKNVCAAT-DRPVVA--SGGVSSLDDLRAIAGLVPAGVEGAI 220 (244)
T ss_dssp BHHHHHHHHHHTTCCCEEEEEC--------C--CCHHHHHHHHHTC-SSCEEE--ESCCCSHHHHHHHHTTGGGTEEEEE
T ss_pred CHHHHHHHHHhCCCCEEEEeccCccccc-CC--CCHHHHHHHHHhc-CCCEEE--ECCCCCHHHHHHHHhhccCCCceee
Confidence 4455667777889999999887653211 11 1245666676643 455543 4566577899999999 999987
Q ss_pred cchhchHHHHhhhcCCCCCHHHHHHHH
Q 018731 212 HNIETVKRLQRIVRDPRAGYEQSLEVL 238 (351)
Q Consensus 212 ~~ies~~~~~~~~r~~~~~~~~~l~~i 238 (351)
++ ..++. ...++++.++.+
T Consensus 221 vG----~al~~----~~~~~~~~~~~~ 239 (244)
T 1vzw_A 221 VG----KALYA----KAFTLEEALEAT 239 (244)
T ss_dssp EC----HHHHT----TSSCHHHHHHHH
T ss_pred ee----HHHHc----CCCCHHHHHHHh
Confidence 76 23332 134666666554
No 224
>1jcn_A Inosine monophosphate dehydrogenase I; IMPD, IMPDH, guanine nucleotide synthesis, oxidoreductase; HET: CPR; 2.50A {Homo sapiens} SCOP: c.1.5.1 d.37.1.1 PDB: 1jr1_A* 1nf7_A* 1b3o_A* 1nfb_A*
Probab=60.01 E-value=49 Score=32.01 Aligned_cols=134 Identities=16% Similarity=0.132 Sum_probs=79.4
Q ss_pred hHHHHHHHHHhCCCcEEEEeccCCCCCCCCcHHHHHHHHHHHHHhCCCcEEEEeecCCCCCHHHHHHHHHcCCCeeecch
Q 018731 135 EPENTAKAIASWGVDYIVLTSVDRDDIPDGGSGHFARTVKAMKKQKPDIMVECLTSDFRGDLRAVETLVHSGLDVFAHNI 214 (351)
Q Consensus 135 ei~~~~~~~~~~G~~~I~ltgg~~~~l~~~~~~~~~~li~~ik~~~p~i~i~~~~~~~~~~~e~l~~L~~aG~~~i~~~i 214 (351)
+..+.++.+.+.|+..|.+..... .+ ....++++.+++..|++.+-.-. ..+.+.++.+.++|+|.|.++.
T Consensus 255 ~~~~~a~~~~~aG~d~v~i~~~~G--~~----~~~~~~i~~i~~~~~~~pvi~~~---v~t~~~a~~l~~aGad~I~vg~ 325 (514)
T 1jcn_A 255 DDKYRLDLLTQAGVDVIVLDSSQG--NS----VYQIAMVHYIKQKYPHLQVIGGN---VVTAAQAKNLIDAGVDGLRVGM 325 (514)
T ss_dssp THHHHHHHHHHTTCSEEEECCSCC--CS----HHHHHHHHHHHHHCTTCEEEEEE---ECSHHHHHHHHHHTCSEEEECS
T ss_pred hhHHHHHHHHHcCCCEEEeeccCC--cc----hhHHHHHHHHHHhCCCCceEecc---cchHHHHHHHHHcCCCEEEECC
Confidence 356677778889999998844332 12 45678999999987776654311 1378899999999999997654
Q ss_pred hchHH-HHhhhcCCCCCHHHHHHHHHHHHHhCCCCeEEEeeee-eCCCCHHHHHHHHHHHHhCCCCEEeeeccc
Q 018731 215 ETVKR-LQRIVRDPRAGYEQSLEVLKHAKLSKKGLITKSSIML-GLGESDDDLKEAMADLRSIDVDILTLGQYL 286 (351)
Q Consensus 215 es~~~-~~~~~r~~~~~~~~~l~~i~~~~~~~~Gi~v~~~~Iv-GlgEt~e~~~~~l~~l~~lg~d~i~i~~~l 286 (351)
....- ..+...+-+......+..+..+++. .++.+ |. |=-.+.+++.+.+. +|++.+.++..+
T Consensus 326 ~~G~~~~t~~~~~~g~~~~~~~~~~~~~~~~-~~ipV----ia~GGI~~~~di~kala----~GAd~V~iG~~~ 390 (514)
T 1jcn_A 326 GCGSICITQEVMACGRPQGTAVYKVAEYARR-FGVPI----IADGGIQTVGHVVKALA----LGASTVMMGSLL 390 (514)
T ss_dssp SCSCCBTTBCCCSCCCCHHHHHHHHHHHHGG-GTCCE----EEESCCCSHHHHHHHHH----TTCSEEEESTTT
T ss_pred CCCcccccccccCCCccchhHHHHHHHHHhh-CCCCE----EEECCCCCHHHHHHHHH----cCCCeeeECHHH
Confidence 32110 0011110111233445555555441 25542 22 21245677766654 799999887544
No 225
>3b4u_A Dihydrodipicolinate synthase; structural genomics, PSI-2, MC protein structure initiative, midwest center for structural genomics; 1.20A {Agrobacterium tumefaciens str}
Probab=59.95 E-value=22 Score=31.82 Aligned_cols=79 Identities=10% Similarity=-0.056 Sum_probs=51.2
Q ss_pred CCCchhHHHHHHHHHhCCCcEEEEecc--CCCCCCCCcHHHHHHHHHHHHHhCCC-cEEEEeecCCCCCH---HHHHHHH
Q 018731 130 PPDPMEPENTAKAIASWGVDYIVLTSV--DRDDIPDGGSGHFARTVKAMKKQKPD-IMVECLTSDFRGDL---RAVETLV 203 (351)
Q Consensus 130 ~~~~eei~~~~~~~~~~G~~~I~ltgg--~~~~l~~~~~~~~~~li~~ik~~~p~-i~i~~~~~~~~~~~---e~l~~L~ 203 (351)
..+.+...+.++.+.+.|++.+++.|. +...|. .+.-.++++.+.+...+ +.|-+-+.. ..+. +..+...
T Consensus 20 ~iD~~~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls---~~Er~~v~~~~~~~~~gr~pviaGvg~-~~t~~ai~la~~A~ 95 (294)
T 3b4u_A 20 TVDIDAMIAHARRCLSNGCDSVTLFGTTGEGCSVG---SRERQAILSSFIAAGIAPSRIVTGVLV-DSIEDAADQSAEAL 95 (294)
T ss_dssp SBCHHHHHHHHHHHHHTTCSEEEESSTTTTGGGSC---HHHHHHHHHHHHHTTCCGGGEEEEECC-SSHHHHHHHHHHHH
T ss_pred CcCHHHHHHHHHHHHHcCCCEEEECccccChhhCC---HHHHHHHHHHHHHHhCCCCcEEEeCCC-ccHHHHHHHHHHHH
Confidence 456777889999999999999998664 434444 46677788877765433 333222221 1133 4556667
Q ss_pred HcCCCeeec
Q 018731 204 HSGLDVFAH 212 (351)
Q Consensus 204 ~aG~~~i~~ 212 (351)
++|.|.+.+
T Consensus 96 ~~Gadavlv 104 (294)
T 3b4u_A 96 NAGARNILL 104 (294)
T ss_dssp HTTCSEEEE
T ss_pred hcCCCEEEE
Confidence 789998854
No 226
>1eep_A Inosine 5'-monophosphate dehydrogenase; alpha-beta barrel, TIM barrel, IMPDH, IMP dehydrogenase, LOO purine biosynthesis, oxidoreductase; 2.40A {Borrelia burgdorferi} SCOP: c.1.5.1
Probab=59.81 E-value=29 Score=32.52 Aligned_cols=131 Identities=18% Similarity=0.179 Sum_probs=73.9
Q ss_pred HHHHHHHHHhCCCcEEEEeccCCCCCCCCcHHHHHHHHHHHHHhCCCcEEEEeecCCCCCHHHHHHHHHcCCCeeecchh
Q 018731 136 PENTAKAIASWGVDYIVLTSVDRDDIPDGGSGHFARTVKAMKKQKPDIMVECLTSDFRGDLRAVETLVHSGLDVFAHNIE 215 (351)
Q Consensus 136 i~~~~~~~~~~G~~~I~ltgg~~~~l~~~~~~~~~~li~~ik~~~p~i~i~~~~~~~~~~~e~l~~L~~aG~~~i~~~ie 215 (351)
..+.++.+.+.|++.|.+..... . .+.+.++++.+++..|++.|-+ .+. .+.+.++.+.++|+|.|.++.+
T Consensus 154 ~~~~a~~~~~~G~d~i~i~~~~g--~----~~~~~e~i~~ir~~~~~~pviv--~~v-~~~~~a~~a~~~Gad~I~vg~~ 224 (404)
T 1eep_A 154 TIERVEELVKAHVDILVIDSAHG--H----STRIIELIKKIKTKYPNLDLIA--GNI-VTKEAALDLISVGADCLKVGIG 224 (404)
T ss_dssp HHHHHHHHHHTTCSEEEECCSCC--S----SHHHHHHHHHHHHHCTTCEEEE--EEE-CSHHHHHHHHTTTCSEEEECSS
T ss_pred HHHHHHHHHHCCCCEEEEeCCCC--C----hHHHHHHHHHHHHHCCCCeEEE--cCC-CcHHHHHHHHhcCCCEEEECCC
Confidence 34556666778999888722211 1 2577889999999876666543 111 3688999999999999987543
Q ss_pred chHH-HHhhhcCCCCCHHHHHHHHHHHHHhCCCCeEEEeeee-eCCCCHHHHHHHHHHHHhCCCCEEeeec
Q 018731 216 TVKR-LQRIVRDPRAGYEQSLEVLKHAKLSKKGLITKSSIML-GLGESDDDLKEAMADLRSIDVDILTLGQ 284 (351)
Q Consensus 216 s~~~-~~~~~r~~~~~~~~~l~~i~~~~~~~~Gi~v~~~~Iv-GlgEt~e~~~~~l~~l~~lg~d~i~i~~ 284 (351)
...- ..+...+.+...-+.+..+..+... .++.+ |. |=-.|.+|+.+.+. +|++.+.++.
T Consensus 225 ~G~~~~~~~~~~~g~p~~~~l~~v~~~~~~-~~ipV----ia~GGI~~~~d~~~ala----~GAd~V~iG~ 286 (404)
T 1eep_A 225 PGSICTTRIVAGVGVPQITAICDVYEACNN-TNICI----IADGGIRFSGDVVKAIA----AGADSVMIGN 286 (404)
T ss_dssp CSTTSHHHHHHCCCCCHHHHHHHHHHHHTT-SSCEE----EEESCCCSHHHHHHHHH----HTCSEEEECH
T ss_pred CCcCcCccccCCCCcchHHHHHHHHHHHhh-cCceE----EEECCCCCHHHHHHHHH----cCCCHHhhCH
Confidence 3210 0011111122222333333333220 34542 22 21245777777654 5899888864
No 227
>1vs1_A 3-deoxy-7-phosphoheptulonate synthase; (beta/alpha)8 barrel, transferase; HET: PEP; 2.30A {Aeropyrum pernix}
Probab=59.76 E-value=29 Score=30.87 Aligned_cols=64 Identities=20% Similarity=0.372 Sum_probs=49.0
Q ss_pred EeeeeeC--CCCHHHHHHHHHHHHhCCCCEEeeecccCC--CCCcccccCCCCHHHHHHHHHHHHhcCccee
Q 018731 252 SSIMLGL--GESDDDLKEAMADLRSIDVDILTLGQYLQP--TPLHLTVKEYVTPEKFDFWKAYGESIGFRYV 319 (351)
Q Consensus 252 ~~~IvGl--gEt~e~~~~~l~~l~~lg~d~i~i~~~l~P--Tp~~~~~~~~v~~~e~~~~~~~~~~~G~~~~ 319 (351)
..+|.|. .++.+...++++.+++.|.+.+-++ +..| |+..+. ....+.+..+++..+++|....
T Consensus 39 ~~vIAgpc~~~~~e~a~~~a~~~k~~ga~~~k~~-~~kprts~~~f~---g~g~~gl~~l~~~~~~~Gl~~~ 106 (276)
T 1vs1_A 39 KAVIAGPCSVESWEQVREAALAVKEAGAHMLRGG-AFKPRTSPYSFQ---GLGLEGLKLLRRAGDEAGLPVV 106 (276)
T ss_dssp CEEEEECSBCCCHHHHHHHHHHHHHHTCSEEECB-SSCCCSSTTSCC---CCTHHHHHHHHHHHHHHTCCEE
T ss_pred eEEEEecCCCCCHHHHHHHHHHHHHhCCCEEEeE-EEeCCCChhhhc---CCCHHHHHHHHHHHHHcCCcEE
Confidence 5577787 7899999999999999999998884 5567 443221 1246778888999999998754
No 228
>2nuw_A 2-keto-3-deoxygluconate/2-keto-3-deoxy-6-phospho aldolase; TIM barrel, lyase; 1.80A {Sulfolobus acidocaldarius dsm 639} PDB: 2nux_A 2nuy_A
Probab=59.58 E-value=14 Score=33.16 Aligned_cols=77 Identities=9% Similarity=-0.034 Sum_probs=50.8
Q ss_pred CCCchhHHHHHHHHHhCCCcEEEEec--cCCCCCCCCcHHHHHHHHHHHHHhCCCcEEEEeecCCCCCH---HHHHHHHH
Q 018731 130 PPDPMEPENTAKAIASWGVDYIVLTS--VDRDDIPDGGSGHFARTVKAMKKQKPDIMVECLTSDFRGDL---RAVETLVH 204 (351)
Q Consensus 130 ~~~~eei~~~~~~~~~~G~~~I~ltg--g~~~~l~~~~~~~~~~li~~ik~~~p~i~i~~~~~~~~~~~---e~l~~L~~ 204 (351)
..+.+...+.++.+.+.|++.+++.| |+...|. .+.-.++++.+.+...+ |-+-+ +...+. +..+...+
T Consensus 16 ~iD~~~l~~lv~~li~~Gv~gl~v~GtTGE~~~Ls---~eEr~~v~~~~~~~~~g--ViaGv-g~~~t~~ai~la~~A~~ 89 (288)
T 2nuw_A 16 KVNVDALKTHAKNLLEKGIDAIFVNGTTGLGPALS---KDEKRQNLNALYDVTHK--LIFQV-GSLNLNDVMELVKFSNE 89 (288)
T ss_dssp CBCHHHHHHHHHHHHHTTCCEEEETSTTTTGGGSC---HHHHHHHHHHHTTTCSC--EEEEC-CCSCHHHHHHHHHHHHT
T ss_pred CcCHHHHHHHHHHHHHcCCCEEEECccccChhhCC---HHHHHHHHHHHHHHhCC--eEEee-CCCCHHHHHHHHHHHHh
Confidence 45677788999999999999998866 4434444 46777888888776555 32222 111234 44555667
Q ss_pred cCCCeeec
Q 018731 205 SGLDVFAH 212 (351)
Q Consensus 205 aG~~~i~~ 212 (351)
+|.|.+.+
T Consensus 90 ~Gadavlv 97 (288)
T 2nuw_A 90 MDILGVSS 97 (288)
T ss_dssp SCCSEEEE
T ss_pred cCCCEEEE
Confidence 79998754
No 229
>3q45_A Mandelate racemase/muconate lactonizing enzyme FA possible chloromuconate cycloisomerase...; (beta/alpha)8-barrel; 3.00A {Cytophaga hutchinsonii} PDB: 3q4d_A
Probab=59.27 E-value=1.1e+02 Score=28.10 Aligned_cols=147 Identities=10% Similarity=0.009 Sum_probs=80.4
Q ss_pred CchhHHHHHHHHHhCCCcEEEEeccCCCCCCCCcHHHHHHHHHHHHHhC-CCcEEEEeecCCCCCH----HHHHHHHHcC
Q 018731 132 DPMEPENTAKAIASWGVDYIVLTSVDRDDIPDGGSGHFARTVKAMKKQK-PDIMVECLTSDFRGDL----RAVETLVHSG 206 (351)
Q Consensus 132 ~~eei~~~~~~~~~~G~~~I~ltgg~~~~l~~~~~~~~~~li~~ik~~~-p~i~i~~~~~~~~~~~----e~l~~L~~aG 206 (351)
++++..+.++.+.+.|++.+-+--|.. .+.-.+.++++++.. |++.+.+=.+.. .+. +.++.|.+.|
T Consensus 140 ~~e~~~~~a~~~~~~G~~~~K~KvG~~-------~~~d~~~v~avR~~~g~~~~l~vDaN~~-~~~~~A~~~~~~l~~~~ 211 (368)
T 3q45_A 140 EPHKMAADAVQIKKNGFEIIKVKVGGS-------KELDVERIRMIREAAGDSITLRIDANQG-WSVETAIETLTLLEPYN 211 (368)
T ss_dssp CHHHHHHHHHHHHHTTCSEEEEECCSC-------HHHHHHHHHHHHHHHCSSSEEEEECTTC-BCHHHHHHHHHHHGGGC
T ss_pred CHHHHHHHHHHHHHcCCCeEEEEecCC-------HHHHHHHHHHHHHHhCCCCeEEEECCCC-CChHHHHHHHHHHhhcC
Confidence 578888888888889999998754421 245567888888875 666554322333 243 3456666777
Q ss_pred CCeeecchhchHHHHhhhcCCCCCHHHHHHHHHHHHHhCCCCeEEEeeeeeCCCCHHHHHHHHHHHHhCCCCEEeeeccc
Q 018731 207 LDVFAHNIETVKRLQRIVRDPRAGYEQSLEVLKHAKLSKKGLITKSSIMLGLGESDDDLKEAMADLRSIDVDILTLGQYL 286 (351)
Q Consensus 207 ~~~i~~~ies~~~~~~~~r~~~~~~~~~l~~i~~~~~~~~Gi~v~~~~IvGlgEt~e~~~~~l~~l~~lg~d~i~i~~~l 286 (351)
+..|- - ++ +..+ ++.++.+++. .++.+.+ +|+..+..+..+.+..-.+|.+.+.
T Consensus 212 i~~iE----q--P~------~~~~----~~~~~~l~~~-~~iPIa~------dE~~~~~~~~~~~~~~~~~d~v~~k--- 265 (368)
T 3q45_A 212 IQHCE----E--PV------SRNL----YTALPKIRQA-CRIPIMA------DESCCNSFDAERLIQIQACDSFNLK--- 265 (368)
T ss_dssp CSCEE----C--CB------CGGG----GGGHHHHHHT-CSSCEEE------STTCCSHHHHHHHHHTTCCSEEEEC---
T ss_pred CCEEE----C--CC------ChhH----HHHHHHHHhh-CCCCEEE------cCCcCCHHHHHHHHHcCCCCeEEec---
Confidence 77662 1 11 0111 1222333331 3444322 4444444444444555567776662
Q ss_pred CCCCCcccccCCCCHHHHHHHHHHHHhcCcceec
Q 018731 287 QPTPLHLTVKEYVTPEKFDFWKAYGESIGFRYVA 320 (351)
Q Consensus 287 ~PTp~~~~~~~~v~~~e~~~~~~~~~~~G~~~~~ 320 (351)
|+... ...+..++.++++..|...+.
T Consensus 266 -~~~~G-------Git~~~~i~~~A~~~gi~~~~ 291 (368)
T 3q45_A 266 -LSKSA-------GITNALNIIRLAEQAHMPVQV 291 (368)
T ss_dssp -TTTTT-------SHHHHHHHHHHHHHTTCCEEE
T ss_pred -hhhcC-------CHHHHHHHHHHHHHcCCcEEe
Confidence 22211 234566777777777776543
No 230
>3b0p_A TRNA-dihydrouridine synthase; TIM barrel, oxidoreductase; HET: FMN; 1.70A {Thermus thermophilus} PDB: 3b0u_X* 3b0v_C*
Probab=59.24 E-value=59 Score=29.77 Aligned_cols=86 Identities=16% Similarity=0.125 Sum_probs=55.0
Q ss_pred HHHHHHHHcCCCeeecchhchHH-HH-hhhcC-CCCCHHHHHHHHHHHHHhCCCCeEEEeeeeeC--CCCHHHHHHHHHH
Q 018731 197 RAVETLVHSGLDVFAHNIETVKR-LQ-RIVRD-PRAGYEQSLEVLKHAKLSKKGLITKSSIMLGL--GESDDDLKEAMAD 271 (351)
Q Consensus 197 e~l~~L~~aG~~~i~~~ies~~~-~~-~~~r~-~~~~~~~~l~~i~~~~~~~~Gi~v~~~~IvGl--gEt~e~~~~~l~~ 271 (351)
+.++.+.++|+|.|.++.-+... .. +.... -..+.+...+.++.+++. .++.|..-+=+|. ..+.++..+.++.
T Consensus 74 ~aA~~a~~~G~D~IeIn~gcP~~~~~~d~~G~~l~~~~~~~~eiv~av~~~-v~~PV~vKiR~g~~~~~~~~~~~~~a~~ 152 (350)
T 3b0p_A 74 EAARIGEAFGYDEINLNLGCPSEKAQEGGYGACLLLDLARVREILKAMGEA-VRVPVTVKMRLGLEGKETYRGLAQSVEA 152 (350)
T ss_dssp HHHHHHHHTTCSEEEEEECCCSHHHHHTTCGGGGGGCHHHHHHHHHHHHHH-CSSCEEEEEESCBTTCCCHHHHHHHHHH
T ss_pred HHHHHHHHcCCCEEEECCcCCCCcCcCCCcchhHHhCHHHHHHHHHHHHHH-hCCceEEEEecCcCccccHHHHHHHHHH
Confidence 56677788899999887643221 11 11100 012566677777777663 2666555444566 3456788889999
Q ss_pred HHhCCCCEEeee
Q 018731 272 LRSIDVDILTLG 283 (351)
Q Consensus 272 l~~lg~d~i~i~ 283 (351)
+.+.|++.+.+.
T Consensus 153 l~~aG~d~I~V~ 164 (350)
T 3b0p_A 153 MAEAGVKVFVVH 164 (350)
T ss_dssp HHHTTCCEEEEE
T ss_pred HHHcCCCEEEEe
Confidence 999999999885
No 231
>1vr6_A Phospho-2-dehydro-3-deoxyheptonate aldolase; TM0343, structural genomics, joint center for STRU genomics, JCSG, protein structure initiative; 1.92A {Thermotoga maritima} SCOP: c.1.10.4 PDB: 1rzm_A* 3pg9_A* 3pg8_A*
Probab=59.22 E-value=42 Score=31.00 Aligned_cols=65 Identities=20% Similarity=0.319 Sum_probs=50.3
Q ss_pred EEeeeeeC--CCCHHHHHHHHHHHHhCCCCEEeeecccCC--CCCcccccCCCCHHHHHHHHHHHHhcCccee
Q 018731 251 KSSIMLGL--GESDDDLKEAMADLRSIDVDILTLGQYLQP--TPLHLTVKEYVTPEKFDFWKAYGESIGFRYV 319 (351)
Q Consensus 251 ~~~~IvGl--gEt~e~~~~~l~~l~~lg~d~i~i~~~l~P--Tp~~~~~~~~v~~~e~~~~~~~~~~~G~~~~ 319 (351)
...+|.|. .++.+...++++.+++.|.+.+.++ +..| ||..+. ....+.+..+++.+++.|....
T Consensus 106 ~~~vIAgpcs~es~e~a~~~a~~~k~aGa~~vr~q-~fKprTs~~~f~---glg~egl~~l~~~~~e~Gl~~~ 174 (350)
T 1vr6_A 106 YFTIIAGPCSVEGREMLMETAHFLSELGVKVLRGG-AYKPRTSPYSFQ---GLGEKGLEYLREAADKYGMYVV 174 (350)
T ss_dssp EEEEEEECSBCCCHHHHHHHHHHHHHTTCCEEECB-SCCCCCSTTSCC---CCTHHHHHHHHHHHHHHTCEEE
T ss_pred CeEEEEeCCCcCCHHHHHHHHHHHHHcCCCeeeee-EEeCCCChHhhc---CCCHHHHHHHHHHHHHcCCcEE
Confidence 36678888 7999999999999999999998884 5567 443322 2346778888889999998754
No 232
>1w3i_A EDA, 2-keto-3-deoxy gluconate aldolase; archaeal metabolism, pyruvate; 1.7A {Sulfolobus solfataricus} SCOP: c.1.10.1 PDB: 1w37_A 1w3n_A* 1w3t_A* 2yda_A*
Probab=59.18 E-value=14 Score=33.23 Aligned_cols=77 Identities=10% Similarity=-0.010 Sum_probs=50.2
Q ss_pred CCCchhHHHHHHHHHhCCCcEEEEecc--CCCCCCCCcHHHHHHHHHHHHHhCCCcEEEEeecCCCCCHHHH---HHHHH
Q 018731 130 PPDPMEPENTAKAIASWGVDYIVLTSV--DRDDIPDGGSGHFARTVKAMKKQKPDIMVECLTSDFRGDLRAV---ETLVH 204 (351)
Q Consensus 130 ~~~~eei~~~~~~~~~~G~~~I~ltgg--~~~~l~~~~~~~~~~li~~ik~~~p~i~i~~~~~~~~~~~e~l---~~L~~ 204 (351)
..+.+...+.++.+.+.|++.+++.|. +...|. .+.-.++++.+.+...+ |-+-+ +...+.+.+ +...+
T Consensus 16 ~iD~~~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls---~eEr~~v~~~~~~~~~g--viaGv-g~~~t~~ai~la~~A~~ 89 (293)
T 1w3i_A 16 RIDKEKLKIHAENLIRKGIDKLFVNGTTGLGPSLS---PEEKLENLKAVYDVTNK--IIFQV-GGLNLDDAIRLAKLSKD 89 (293)
T ss_dssp SBCHHHHHHHHHHHHHTTCCEEEESSTTTTGGGSC---HHHHHHHHHHHHTTCSC--EEEEC-CCSCHHHHHHHHHHGGG
T ss_pred CcCHHHHHHHHHHHHHcCCCEEEECccccChhhCC---HHHHHHHHHHHHHHcCC--EEEec-CCCCHHHHHHHHHHHHh
Confidence 356677889999999999999998664 433444 46777888888876555 32222 222244444 44555
Q ss_pred cCCCeeec
Q 018731 205 SGLDVFAH 212 (351)
Q Consensus 205 aG~~~i~~ 212 (351)
+|.|.+.+
T Consensus 90 ~Gadavlv 97 (293)
T 1w3i_A 90 FDIVGIAS 97 (293)
T ss_dssp SCCSEEEE
T ss_pred cCCCEEEE
Confidence 69998754
No 233
>1z41_A YQJM, probable NADH-dependent flavin oxidoreductase YQJ; FMN, beta-alpha-barrel; HET: FMN; 1.30A {Bacillus subtilis} SCOP: c.1.4.1 PDB: 1z42_A* 1z44_A* 1z48_A*
Probab=58.95 E-value=37 Score=30.93 Aligned_cols=86 Identities=15% Similarity=0.104 Sum_probs=50.4
Q ss_pred HHHHHHHHcCCCeeecchhc---hHHHH-hhh--c-C-CCCCHHH----HHHHHHHHHHhCCCCeEEEeeeee---C-CC
Q 018731 197 RAVETLVHSGLDVFAHNIET---VKRLQ-RIV--R-D-PRAGYEQ----SLEVLKHAKLSKKGLITKSSIMLG---L-GE 260 (351)
Q Consensus 197 e~l~~L~~aG~~~i~~~ies---~~~~~-~~~--r-~-~~~~~~~----~l~~i~~~~~~~~Gi~v~~~~IvG---l-gE 260 (351)
+.++..+++|+|.|-++.-. ++++. ... | + -+.+.+. .++.++.+++.. ++.+..-+=.. - |.
T Consensus 148 ~aA~~a~~aGfDgVeih~~~gyLl~qFlsp~~n~R~d~yGGslenr~r~~~eiv~avr~~v-~~pv~vris~~~~~~~g~ 226 (338)
T 1z41_A 148 QAAARAKEAGFDVIEIHAAHGYLIHEFLSPLSNHRTDEYGGSPENRYRFLREIIDEVKQVW-DGPLFVRVSASDYTDKGL 226 (338)
T ss_dssp HHHHHHHHTTCSEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHC-CSCEEEEEECCCCSTTSC
T ss_pred HHHHHHHHcCCCEEEeccccchHHHHccCCCcCCcCcccCcchhhhHHHHHHHHHHHHHHc-CCcEEEEecCcccCCCCC
Confidence 45677788999998764321 11211 100 0 0 1234433 355666666533 44443333221 1 56
Q ss_pred CHHHHHHHHHHHHhCCCCEEeee
Q 018731 261 SDDDLKEAMADLRSIDVDILTLG 283 (351)
Q Consensus 261 t~e~~~~~l~~l~~lg~d~i~i~ 283 (351)
+.++..+.++.+.+.|+|.+.+.
T Consensus 227 ~~~~~~~~a~~l~~~Gvd~i~v~ 249 (338)
T 1z41_A 227 DIADHIGFAKWMKEQGVDLIDCS 249 (338)
T ss_dssp CHHHHHHHHHHHHHTTCCEEEEE
T ss_pred CHHHHHHHHHHHHHcCCCEEEEe
Confidence 88899999999999999999985
No 234
>1h1y_A D-ribulose-5-phosphate 3-epimerase; oxidative pentose phosphate pathway, isomerase; 1.87A {Oryza sativa} SCOP: c.1.2.2 PDB: 1h1z_A
Probab=58.58 E-value=41 Score=28.58 Aligned_cols=66 Identities=12% Similarity=0.253 Sum_probs=42.3
Q ss_pred HHHHhC--CCcEEEEeccCCC----CCCCCcHHHHHHHHHHHHHhCCCcEEEEeecCCCCCHHHHHHHHHcCCCeeecc
Q 018731 141 KAIASW--GVDYIVLTSVDRD----DIPDGGSGHFARTVKAMKKQKPDIMVECLTSDFRGDLRAVETLVHSGLDVFAHN 213 (351)
Q Consensus 141 ~~~~~~--G~~~I~ltgg~~~----~l~~~~~~~~~~li~~ik~~~p~i~i~~~~~~~~~~~e~l~~L~~aG~~~i~~~ 213 (351)
+.+... ++..|.+.+.++. .+. +...+.++.+++..+++.+.+ .+++ +.+.+..+.++|+|.+-++
T Consensus 130 ~~~~~~~~~~d~vl~~sv~pg~~g~~~~----~~~l~~i~~~~~~~~~~pi~v--~GGI-~~~ni~~~~~aGaD~vvvG 201 (228)
T 1h1y_A 130 FPLVEAENPVELVLVMTVEPGFGGQKFM----PEMMEKVRALRKKYPSLDIEV--DGGL-GPSTIDVAASAGANCIVAG 201 (228)
T ss_dssp HHHHHSSSCCSEEEEESSCTTCSSCCCC----GGGHHHHHHHHHHCTTSEEEE--ESSC-STTTHHHHHHHTCCEEEES
T ss_pred HHHHhcCCCCCEEEEEeecCCCCcccCC----HHHHHHHHHHHHhcCCCCEEE--ECCc-CHHHHHHHHHcCCCEEEEC
Confidence 344454 7888888544321 122 344566777777655666654 3444 6688888999999998775
No 235
>3o6c_A PNP synthase, pyridoxine 5'-phosphate synthase; structural genomics, IDP90671, center for structural genomic infectious diseases; HET: MSE; 1.87A {Campylobacter jejuni subsp} SCOP: c.1.24.0 PDB: 3o6d_A*
Probab=58.37 E-value=96 Score=27.20 Aligned_cols=124 Identities=15% Similarity=0.104 Sum_probs=74.0
Q ss_pred HHHHHHHHhCCCcEEEEeccCCCCCCCCcHHHHHHHHHHHHHhCCCcEEEEeecCCCCCHHHHHHHHHcCCCeeecchhc
Q 018731 137 ENTAKAIASWGVDYIVLTSVDRDDIPDGGSGHFARTVKAMKKQKPDIMVECLTSDFRGDLRAVETLVHSGLDVFAHNIET 216 (351)
Q Consensus 137 ~~~~~~~~~~G~~~I~ltgg~~~~l~~~~~~~~~~li~~ik~~~p~i~i~~~~~~~~~~~e~l~~L~~aG~~~i~~~ies 216 (351)
.+.+..+...| +.|.+== ++|-..-...++..+.+.++ -.+++++.. ++++++...+...+.+++-.|.
T Consensus 28 v~aA~~ae~aG-dgITvHl--ReDrRHI~d~Dv~~L~~~~~---~~lNlE~a~-----t~emi~ial~~kP~~vtLVPEk 96 (260)
T 3o6c_A 28 LEAAFIVARHG-DQITLHV--REDRRHAQDFDLENIIKFCK---SPVNLECAL-----NDEILNLALKLKPHRVTLVPEK 96 (260)
T ss_dssp HHHHHHHHHHS-SEEEEEC--CTTCSSSCHHHHHHHHHHCS---SCEEEEECS-----CHHHHHHHHHHCCSEEEECCCS
T ss_pred HHHHHHHHHhC-CeEEEee--CCCcccCCHHHHHHHHHHcC---CCEEeecCC-----CHHHHHHHHHcCCCEEEECCCC
Confidence 34444445678 8887621 11111111234444333322 256788733 7899999999999999987776
Q ss_pred hHHHH-hhhcCCCCCHHHHHHHHHHHHHhCCCCeEEEeeeeeCCCCHHHHHHHHHHHHhCCCCEEeee
Q 018731 217 VKRLQ-RIVRDPRAGYEQSLEVLKHAKLSKKGLITKSSIMLGLGESDDDLKEAMADLRSIDVDILTLG 283 (351)
Q Consensus 217 ~~~~~-~~~r~~~~~~~~~l~~i~~~~~~~~Gi~v~~~~IvGlgEt~e~~~~~l~~l~~lg~d~i~i~ 283 (351)
-++.. ..-- ....+...++++.+++ .||.|+..+ .-.. +.++...++|++.|-++
T Consensus 97 reE~TTegGl--dv~~~~L~~~i~~L~~--~GIrVSLFI----Dpd~----~qi~aA~~~GAd~IELh 152 (260)
T 3o6c_A 97 REELTTEGGL--CLNHAKLKQSIEKLQN--ANIEVSLFI----NPSL----EDIEKSKILKAQFIELH 152 (260)
T ss_dssp GGGBCTTSSB--CTTCTTHHHHHHHHHH--TTCEEEEEE----CSCH----HHHHHHHHTTCSEEEEC
T ss_pred CCccCCCCCh--hhCHHHHHHHHHHHHH--CCCEEEEEe----CCCH----HHHHHHHHhCCCEEEEe
Confidence 55532 1000 0144556677788888 999876543 2222 34567788999998883
No 236
>3dz1_A Dihydrodipicolinate synthase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI2, structural genomics; 1.87A {Rhodopseudomonas palustris} SCOP: c.1.10.0
Probab=58.37 E-value=40 Score=30.41 Aligned_cols=79 Identities=11% Similarity=0.056 Sum_probs=52.5
Q ss_pred CCCchhHHHHHHHHHhCCCcEEEEec--cCCCCCCCCcHHHHHHHHHHHHHhCCCcEEEEeecCCCCCH---HHHHHHHH
Q 018731 130 PPDPMEPENTAKAIASWGVDYIVLTS--VDRDDIPDGGSGHFARTVKAMKKQKPDIMVECLTSDFRGDL---RAVETLVH 204 (351)
Q Consensus 130 ~~~~eei~~~~~~~~~~G~~~I~ltg--g~~~~l~~~~~~~~~~li~~ik~~~p~i~i~~~~~~~~~~~---e~l~~L~~ 204 (351)
..+.+...+.++.+.+.|++.+++.| |+...|. .+.-.++++.+.+....+.|-+-+. ...+. +..+...+
T Consensus 25 ~iD~~~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Lt---~~Er~~v~~~~v~~~grvpViaGvg-~~~t~~ai~la~~A~~ 100 (313)
T 3dz1_A 25 KIDDVSIDRLTDFYAEVGCEGVTVLGILGEAPKLD---AAEAEAVATRFIKRAKSMQVIVGVS-APGFAAMRRLARLSMD 100 (313)
T ss_dssp CBCHHHHHHHHHHHHHTTCSEEEESTGGGTGGGSC---HHHHHHHHHHHHHHCTTSEEEEECC-CSSHHHHHHHHHHHHH
T ss_pred CcCHHHHHHHHHHHHHCCCCEEEeCccCcChhhCC---HHHHHHHHHHHHHHcCCCcEEEecC-CCCHHHHHHHHHHHHH
Confidence 45677888999999999999998865 4544455 4666777777766553355543222 11233 55666777
Q ss_pred cCCCeeec
Q 018731 205 SGLDVFAH 212 (351)
Q Consensus 205 aG~~~i~~ 212 (351)
+|.|.+.+
T Consensus 101 ~Gadavlv 108 (313)
T 3dz1_A 101 AGAAGVMI 108 (313)
T ss_dssp HTCSEEEE
T ss_pred cCCCEEEE
Confidence 89999864
No 237
>3cpr_A Dihydrodipicolinate synthetase; (beta/alpha)8-barrel fold with A C-terminal alpha-helical segment, amino-acid biosynthesis, cytoplasm; HET: MCL; 2.20A {Corynebacterium glutamicum}
Probab=58.23 E-value=23 Score=31.91 Aligned_cols=79 Identities=14% Similarity=0.104 Sum_probs=50.5
Q ss_pred CCCchhHHHHHHHHHhCCCcEEEEec--cCCCCCCCCcHHHHHHHHHHHHHhCC-CcEEEEeecCCCCCH---HHHHHHH
Q 018731 130 PPDPMEPENTAKAIASWGVDYIVLTS--VDRDDIPDGGSGHFARTVKAMKKQKP-DIMVECLTSDFRGDL---RAVETLV 203 (351)
Q Consensus 130 ~~~~eei~~~~~~~~~~G~~~I~ltg--g~~~~l~~~~~~~~~~li~~ik~~~p-~i~i~~~~~~~~~~~---e~l~~L~ 203 (351)
..+.+...+.++.+.+.|++.+++.| |+...|. .+.-.++++.+.+... .+.|-+-+. ...+. +..+...
T Consensus 33 ~iD~~~l~~lv~~li~~Gv~gl~v~GttGE~~~Ls---~~Er~~v~~~~~~~~~grvpviaGvg-~~st~~ai~la~~A~ 108 (304)
T 3cpr_A 33 DIDIAAGREVAAYLVDKGLDSLVLAGTTGESPTTT---AAEKLELLKAVREEVGDRAKLIAGVG-TNNTRTSVELAEAAA 108 (304)
T ss_dssp CBCHHHHHHHHHHHHHTTCCEEEESSTTTTTTTSC---HHHHHHHHHHHHHHHTTTSEEEEECC-CSCHHHHHHHHHHHH
T ss_pred CcCHHHHHHHHHHHHHcCCCEEEECccccChhhCC---HHHHHHHHHHHHHHhCCCCcEEecCC-CCCHHHHHHHHHHHH
Confidence 45677888999999999999999866 4444455 3556666766665422 355433222 11234 4556667
Q ss_pred HcCCCeeec
Q 018731 204 HSGLDVFAH 212 (351)
Q Consensus 204 ~aG~~~i~~ 212 (351)
++|.|.+.+
T Consensus 109 ~~Gadavlv 117 (304)
T 3cpr_A 109 SAGADGLLV 117 (304)
T ss_dssp HTTCSEEEE
T ss_pred hcCCCEEEE
Confidence 789998754
No 238
>3vav_A 3-methyl-2-oxobutanoate hydroxymethyltransferase; structural genomics, seattle structural genomics center for infectious disease; 1.80A {Burkholderia thailandensis} SCOP: c.1.12.8 PDB: 3ez4_A
Probab=58.23 E-value=1e+02 Score=27.39 Aligned_cols=86 Identities=8% Similarity=0.069 Sum_probs=59.1
Q ss_pred CHHHHHHHHHcCCCeeecchhchHHHHhhhcCC-CCCHHHHHHHHHHHHHhCCCCeEEEeeeee-CCCCHHHHHHHHHHH
Q 018731 195 DLRAVETLVHSGLDVFAHNIETVKRLQRIVRDP-RAGYEQSLEVLKHAKLSKKGLITKSSIMLG-LGESDDDLKEAMADL 272 (351)
Q Consensus 195 ~~e~l~~L~~aG~~~i~~~ies~~~~~~~~r~~-~~~~~~~l~~i~~~~~~~~Gi~v~~~~IvG-lgEt~e~~~~~l~~l 272 (351)
|-..++.+-++|++.+..+ +|+-...-...+. .-+.++.+...+.+.+.-....+.+|+-+| + .+.++..++...+
T Consensus 38 Da~sA~l~e~aG~d~ilvG-dSl~~~~lG~~dt~~vtldem~~h~~aV~r~~~~~~vvaD~pfgsY-~s~~~a~~~a~rl 115 (275)
T 3vav_A 38 DASFAALLDRANVDVQLIG-DSLGNVLQGQTTTLPVTLDDIAYHTACVARAQPRALIVADLPFGTY-GTPADAFASAVKL 115 (275)
T ss_dssp SHHHHHHHHHTTCSEEEEC-TTHHHHTTCCSSSTTCCHHHHHHHHHHHHHTCCSSEEEEECCTTSC-SSHHHHHHHHHHH
T ss_pred CHHHHHHHHHcCCCEEEEC-cHHHHHHcCCCCCCccCHHHHHHHHHHHHhcCCCCCEEEecCCCCC-CCHHHHHHHHHHH
Confidence 7778888999999999655 3332210011111 348999999888887632346688999885 7 7888888877766
Q ss_pred HhCCCCEEee
Q 018731 273 RSIDVDILTL 282 (351)
Q Consensus 273 ~~lg~d~i~i 282 (351)
.+.|++-+.+
T Consensus 116 ~kaGa~aVkl 125 (275)
T 3vav_A 116 MRAGAQMVKF 125 (275)
T ss_dssp HHTTCSEEEE
T ss_pred HHcCCCEEEE
Confidence 6669887776
No 239
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=58.09 E-value=1.7e+02 Score=30.95 Aligned_cols=170 Identities=10% Similarity=0.009 Sum_probs=92.5
Q ss_pred chhHHHHHHHHHhCCCcEEEEeccCCCCCC--C------CcHHHHHHHHHHHHHhC-CCcEEEEeecCCCCCHHHHHHHH
Q 018731 133 PMEPENTAKAIASWGVDYIVLTSVDRDDIP--D------GGSGHFARTVKAMKKQK-PDIMVECLTSDFRGDLRAVETLV 203 (351)
Q Consensus 133 ~eei~~~~~~~~~~G~~~I~ltgg~~~~l~--~------~~~~~~~~li~~ik~~~-p~i~i~~~~~~~~~~~e~l~~L~ 203 (351)
+++..+.++.+.+.|++.|.+.-+.|.... . ...+.+.++++++++.. ..+.+.+ +++.....+.++.+.
T Consensus 647 ~~~~~~~a~~~~~~g~d~iein~~~P~~~~~~~~G~~~~~~~~~~~~iv~~v~~~~~~Pv~vK~-~~~~~~~~~~a~~~~ 725 (1025)
T 1gte_A 647 KNDWMELSRKAEASGADALELNLSCPHGMGERGMGLACGQDPELVRNICRWVRQAVQIPFFAKL-TPNVTDIVSIARAAK 725 (1025)
T ss_dssp HHHHHHHHHHHHHTTCSEEEEECCCBCCCC-----SBGGGCHHHHHHHHHHHHHHCSSCEEEEE-CSCSSCHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCCCEEEEECCCCCCCCCCCcccccccCHHHHHHHHHHHHHhhCCceEEEe-CCChHHHHHHHHHHH
Confidence 456667777777789999888665542211 0 12467889999999863 1234444 444432367889999
Q ss_pred HcCCCeeecc--------hhc---hHH--------HHhhhcCCCCCHHHHHHHHHHHHHhCCCCeEEEeeeeeCCCCHHH
Q 018731 204 HSGLDVFAHN--------IET---VKR--------LQRIVRDPRAGYEQSLEVLKHAKLSKKGLITKSSIMLGLGESDDD 264 (351)
Q Consensus 204 ~aG~~~i~~~--------ies---~~~--------~~~~~r~~~~~~~~~l~~i~~~~~~~~Gi~v~~~~IvGlgEt~e~ 264 (351)
++|+|.|.+. ++. ... ....+.+ ...+...++.+..+++..+++.+ +..|=-.|.+|
T Consensus 726 ~~G~d~i~v~Nt~~~~~~~~~~~~~~~~~~~~gr~~~gg~sg-~~~~~~~~~~v~~v~~~~~~ipv---i~~GGI~s~~d 801 (1025)
T 1gte_A 726 EGGADGVTATNTVSGLMGLKADGTPWPAVGAGKRTTYGGVSG-TAIRPIALRAVTTIARALPGFPI---LATGGIDSAES 801 (1025)
T ss_dssp HHTCSEEEECCCEEECCCBCTTSCBSSCBTTTTBBCCEEEES-GGGHHHHHHHHHHHHHHSTTCCE---EEESSCCSHHH
T ss_pred HcCCCEEEEeccccccccccccccccccccccccccCCCCCc-ccchhHHHHHHHHHHHHcCCCCE---EEecCcCCHHH
Confidence 9999999762 110 000 0000110 11233335666666653335542 11222357788
Q ss_pred HHHHHHHHHhCCCCEEeeecccCCCCCcccccCCCCHHHHHHHHHHHHhcCcc
Q 018731 265 LKEAMADLRSIDVDILTLGQYLQPTPLHLTVKEYVTPEKFDFWKAYGESIGFR 317 (351)
Q Consensus 265 ~~~~l~~l~~lg~d~i~i~~~l~PTp~~~~~~~~v~~~e~~~~~~~~~~~G~~ 317 (351)
+.+.+. +|++.+.++.-+.-.+. ..-..-...++..+...||.
T Consensus 802 a~~~l~----~Ga~~v~vg~~~l~~~~------~~~~~~~~~l~~~l~~~G~~ 844 (1025)
T 1gte_A 802 GLQFLH----SGASVLQVCSAVQNQDF------TVIQDYCTGLKALLYLKSIE 844 (1025)
T ss_dssp HHHHHH----TTCSEEEESHHHHTSCT------THHHHHHHHHHHHHHHTTCG
T ss_pred HHHHHH----cCCCEEEEeeccccCCc------cHHHHHHHHHHHHHHHcCCC
Confidence 777664 79999888632200011 11122233466677778885
No 240
>3flu_A DHDPS, dihydrodipicolinate synthase; TIM barrel, beta-alpha-barrel, amino-acid biosynthesis, diaminopimelate biosynthesis; 2.00A {Neisseria meningitidis serogroup B} SCOP: c.1.10.0
Probab=57.94 E-value=15 Score=33.13 Aligned_cols=79 Identities=13% Similarity=0.047 Sum_probs=50.1
Q ss_pred CCCchhHHHHHHHHHhCCCcEEEEec--cCCCCCCCCcHHHHHHHHHHHHHhC-CCcEEEEeecCCCCCH---HHHHHHH
Q 018731 130 PPDPMEPENTAKAIASWGVDYIVLTS--VDRDDIPDGGSGHFARTVKAMKKQK-PDIMVECLTSDFRGDL---RAVETLV 203 (351)
Q Consensus 130 ~~~~eei~~~~~~~~~~G~~~I~ltg--g~~~~l~~~~~~~~~~li~~ik~~~-p~i~i~~~~~~~~~~~---e~l~~L~ 203 (351)
..+.+...+.++.+.+.|++.+++.| |+...|. .+.-.++++.+.+.. ..+.|-+-+. ...+. +..+...
T Consensus 24 ~iD~~~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls---~~Er~~v~~~~~~~~~grvpviaGvg-~~~t~~ai~la~~a~ 99 (297)
T 3flu_A 24 SIHYEQLRDLIDWHIENGTDGIVAVGTTGESATLS---VEEHTAVIEAVVKHVAKRVPVIAGTG-ANNTVEAIALSQAAE 99 (297)
T ss_dssp CBCHHHHHHHHHHHHHTTCCEEEESSTTTTGGGSC---HHHHHHHHHHHHHHHTTSSCEEEECC-CSSHHHHHHHHHHHH
T ss_pred CcCHHHHHHHHHHHHHcCCCEEEeCccccCcccCC---HHHHHHHHHHHHHHhCCCCcEEEeCC-CcCHHHHHHHHHHHH
Confidence 45677888999999999999999866 4434444 455666676665542 2344433221 11233 5566777
Q ss_pred HcCCCeeec
Q 018731 204 HSGLDVFAH 212 (351)
Q Consensus 204 ~aG~~~i~~ 212 (351)
++|.|.+.+
T Consensus 100 ~~Gadavlv 108 (297)
T 3flu_A 100 KAGADYTLS 108 (297)
T ss_dssp HTTCSEEEE
T ss_pred HcCCCEEEE
Confidence 889999854
No 241
>1s2w_A Phosphoenolpyruvate phosphomutase; phosphonopyruvate, phosphonate biosynthesis pathway, isomera; 1.69A {Mytilus edulis} SCOP: c.1.12.7 PDB: 1m1b_A 1s2t_A 1s2v_A 1pym_A 1s2u_A
Probab=57.49 E-value=94 Score=27.81 Aligned_cols=85 Identities=18% Similarity=0.130 Sum_probs=60.6
Q ss_pred CHHHHHHHHHcCCCeeecchhchHHHHhhhcCC-CCCHHHHHHHHHHHHHhCCCCeEEEeeeeeCCCCHHHHHHHHHHHH
Q 018731 195 DLRAVETLVHSGLDVFAHNIETVKRLQRIVRDP-RAGYEQSLEVLKHAKLSKKGLITKSSIMLGLGESDDDLKEAMADLR 273 (351)
Q Consensus 195 ~~e~l~~L~~aG~~~i~~~ies~~~~~~~~r~~-~~~~~~~l~~i~~~~~~~~Gi~v~~~~IvGlgEt~e~~~~~l~~l~ 273 (351)
|.-....+.++|++.+.++=.++.... ...+. ..++++.+..++.+.+. ..+.+.+|+-.|+| +.+++.+++..+.
T Consensus 28 D~~sA~~~~~aG~~ai~vsg~~~a~~l-G~pD~~~vt~~em~~~~~~I~~~-~~~PviaD~d~Gyg-~~~~v~~~v~~l~ 104 (295)
T 1s2w_A 28 NGLSARIVQEAGFKGIWGSGLSVSAQL-GVRDSNEASWTQVVEVLEFMSDA-SDVPILLDADTGYG-NFNNARRLVRKLE 104 (295)
T ss_dssp SHHHHHHHHHHTCSCEEECCHHHHHTC----------CHHHHHHHHHHHHT-CSSCEEEECCSSCS-SHHHHHHHHHHHH
T ss_pred CHHHHHHHHHcCCCEEEeChHHHHHhC-CCCCCCCCCHHHHHHHHHHHHhc-CCCCEEecCCCCCC-CHHHHHHHHHHHH
Confidence 677888888999999988733322211 01111 34888999998888752 45679999999987 4688899999999
Q ss_pred hCCCCEEee
Q 018731 274 SIDVDILTL 282 (351)
Q Consensus 274 ~lg~d~i~i 282 (351)
+.|+.-+.+
T Consensus 105 ~aGaagv~i 113 (295)
T 1s2w_A 105 DRGVAGACL 113 (295)
T ss_dssp HTTCCEEEE
T ss_pred HcCCcEEEE
Confidence 999998887
No 242
>2j27_A Triosephosphate isomerase glycosomal; TIM, 2PG, LOOP7, glycosome, TIM-barrel, gluconeogenesis, lipid synthesis, atomic resolution; 1.15A {Trypanosoma brucei brucei} PDB: 2j24_A 1kv5_A 1tpe_A 1tsi_A* 3tim_A 2v2c_A 2v0t_A 1tri_A 1tti_A 1mss_A 1ttj_A* 2wsq_A 2y70_A 2y6z_A* 1ml1_A 2wsr_A 3q37_A 2v2h_A 2v2d_A 1dkw_A ...
Probab=57.15 E-value=55 Score=28.65 Aligned_cols=56 Identities=14% Similarity=0.176 Sum_probs=39.4
Q ss_pred HHHHHHHcCCCeeecchhchHHHHhhhcCCCCCHHHHHHHHHHHHHhCCCCeEEEeeeeeCCCCHHHH
Q 018731 198 AVETLVHSGLDVFAHNIETVKRLQRIVRDPRAGYEQSLEVLKHAKLSKKGLITKSSIMLGLGESDDDL 265 (351)
Q Consensus 198 ~l~~L~~aG~~~i~~~ies~~~~~~~~r~~~~~~~~~l~~i~~~~~~~~Gi~v~~~~IvGlgEt~e~~ 265 (351)
-...|+++|++.+-+|- ..+|.+- +.+-+.+-+.++.+.+ .|+. .|+-.|||.++.
T Consensus 79 S~~mL~d~G~~~ViiGH----SERR~~f--~Etd~~v~~Kv~~Al~--~GL~----pI~CvGEtleer 134 (250)
T 2j27_A 79 SLPILKDFGVNWIVLGH----SERRAYY--GETNEIVADKVAAAVA--SGFM----VIACIGETLQER 134 (250)
T ss_dssp BHHHHHHTTCCEEEESC----HHHHHHS--CCCHHHHHHHHHHHHH--HTCE----EEEEECCCHHHH
T ss_pred CHHHHHHcCCCEEEECc----hhhhccc--CCCHHHHHHHHHHHHH--CCCE----EEEEeCCCHHHh
Confidence 45678899999998762 2233332 5677777778888888 8886 355568998876
No 243
>3ivs_A Homocitrate synthase, mitochondrial; TIM barrel, metalloprotein, transferase, claisen condensatio acid biosynthesis; 2.24A {Schizosaccharomyces pombe} PDB: 3ivt_A* 3ivu_A* 3mi3_A*
Probab=57.04 E-value=53 Score=31.16 Aligned_cols=80 Identities=13% Similarity=0.140 Sum_probs=48.7
Q ss_pred CchhHHHHHHHHHhCCCcEEEEeccCCCCCCCCcHHHHHHHHHHHHHhCCCcEEEEe-ecCCCCCHHHHHHHHHcCCCee
Q 018731 132 DPMEPENTAKAIASWGVDYIVLTSVDRDDIPDGGSGHFARTVKAMKKQKPDIMVECL-TSDFRGDLRAVETLVHSGLDVF 210 (351)
Q Consensus 132 ~~eei~~~~~~~~~~G~~~I~ltgg~~~~l~~~~~~~~~~li~~ik~~~p~i~i~~~-~~~~~~~~e~l~~L~~aG~~~i 210 (351)
+++.+.+.++.+.+.|+..|.|..-..-.. ...+.++++.+++.. ++.+.+- +++.-+--...-.-.++|+++|
T Consensus 178 d~~~~~~v~~~~~~~Ga~~i~l~DTvG~~~----P~~v~~lv~~l~~~~-~~~i~~H~Hnd~GlAvAN~laAv~aGa~~v 252 (423)
T 3ivs_A 178 DLVDLLSLYKAVDKIGVNRVGIADTVGCAT----PRQVYDLIRTLRGVV-SCDIECHFHNDTGMAIANAYCALEAGATHI 252 (423)
T ss_dssp CHHHHHHHHHHHHHHCCSEEEEEETTSCCC----HHHHHHHHHHHHHHC-SSEEEEEEBCTTSCHHHHHHHHHHTTCCEE
T ss_pred CHHHHHHHHHHHHHhCCCccccCCccCcCC----HHHHHHHHHHHHhhc-CCeEEEEECCCCchHHHHHHHHHHhCCCEE
Confidence 456677888888888998888843322112 367888888888764 4444432 3333222333444556899988
Q ss_pred ecchhc
Q 018731 211 AHNIET 216 (351)
Q Consensus 211 ~~~ies 216 (351)
...+-.
T Consensus 253 d~ti~G 258 (423)
T 3ivs_A 253 DTSILG 258 (423)
T ss_dssp EEBGGG
T ss_pred EEeccc
Confidence 655433
No 244
>2yw3_A 4-hydroxy-2-oxoglutarate aldolase/2-deydro-3- deoxyphosphogluconate aldolase; structural genomics, NPPSFA; 1.67A {Thermus thermophilus} PDB: 2yw4_A
Probab=57.01 E-value=86 Score=26.26 Aligned_cols=108 Identities=16% Similarity=0.181 Sum_probs=69.4
Q ss_pred CchhHHHHHHHHHhCCCcEEEEeccCCCCCCCCcHHHHHHHHHHHHHhCCCcEEEEeecCCCCCHHHHHHHHHcCCCeee
Q 018731 132 DPMEPENTAKAIASWGVDYIVLTSVDRDDIPDGGSGHFARTVKAMKKQKPDIMVECLTSDFRGDLRAVETLVHSGLDVFA 211 (351)
Q Consensus 132 ~~eei~~~~~~~~~~G~~~I~ltgg~~~~l~~~~~~~~~~li~~ik~~~p~i~i~~~~~~~~~~~e~l~~L~~aG~~~i~ 211 (351)
++++..+.++.+.+.|++-|-++--+ ..-.+.++.+++ +++.+..-+ .++.+.++...++|.+.+.
T Consensus 23 ~~~~~~~~~~~l~~gGv~~iel~~k~---------~~~~~~i~~~~~--~~~~~gag~---vl~~d~~~~A~~~GAd~v~ 88 (207)
T 2yw3_A 23 GGEDLLGLARVLEEEGVGALEITLRT---------EKGLEALKALRK--SGLLLGAGT---VRSPKEAEAALEAGAAFLV 88 (207)
T ss_dssp SCCCHHHHHHHHHHTTCCEEEEECSS---------THHHHHHHHHTT--SSCEEEEES---CCSHHHHHHHHHHTCSEEE
T ss_pred CHHHHHHHHHHHHHcCCCEEEEeCCC---------hHHHHHHHHHhC--CCCEEEeCe---EeeHHHHHHHHHcCCCEEE
Confidence 45677888888899999988885211 133477777777 676665533 3478999999999999885
Q ss_pred cchhchHHHHhhhcCCCCCHHHHHHHHHHHHHhCCCCeEEEeeeeeCCCCHHHHHHHHHHHHhCCCCEEee
Q 018731 212 HNIETVKRLQRIVRDPRAGYEQSLEVLKHAKLSKKGLITKSSIMLGLGESDDDLKEAMADLRSIDVDILTL 282 (351)
Q Consensus 212 ~~ies~~~~~~~~r~~~~~~~~~l~~i~~~~~~~~Gi~v~~~~IvGlgEt~e~~~~~l~~l~~lg~d~i~i 282 (351)
.+ ..+ .+.++.+++ .|+. ++.| -.|.+++.+. .+.|+|.+.+
T Consensus 89 ~~--------------~~d----~~v~~~~~~--~g~~----~i~G-~~t~~e~~~A----~~~Gad~v~~ 130 (207)
T 2yw3_A 89 SP--------------GLL----EEVAALAQA--RGVP----YLPG-VLTPTEVERA----LALGLSALKF 130 (207)
T ss_dssp ES--------------SCC----HHHHHHHHH--HTCC----EEEE-ECSHHHHHHH----HHTTCCEEEE
T ss_pred cC--------------CCC----HHHHHHHHH--hCCC----EEec-CCCHHHHHHH----HHCCCCEEEE
Confidence 32 112 133334444 4543 4555 3466665443 3568888877
No 245
>3ngj_A Deoxyribose-phosphate aldolase; lyase, structural genomics, structural genomics center for infectious disease, ssgcid; 1.70A {Entamoeba histolytica}
Probab=56.98 E-value=97 Score=26.85 Aligned_cols=152 Identities=12% Similarity=0.068 Sum_probs=92.5
Q ss_pred CCchhHHHHHHHHHhCCCcEEEEeccCCCCCCCCcHHHHHHHHHHHHHhCCCcEEEEee--cCCCCCH----HHHHHHHH
Q 018731 131 PDPMEPENTAKAIASWGVDYIVLTSVDRDDIPDGGSGHFARTVKAMKKQKPDIMVECLT--SDFRGDL----RAVETLVH 204 (351)
Q Consensus 131 ~~~eei~~~~~~~~~~G~~~I~ltgg~~~~l~~~~~~~~~~li~~ik~~~p~i~i~~~~--~~~~~~~----e~l~~L~~ 204 (351)
.+.+++.+.++++.+.|+..|++. | .++....+.++. .++.+.+.. |.+..+. ...+...+
T Consensus 40 ~t~~~i~~lc~eA~~~~~~aVcV~---p--------~~v~~a~~~L~~--s~v~v~tVigFP~G~~~~~~Kv~Ea~~Ai~ 106 (239)
T 3ngj_A 40 ATEEQIRKLCSEAAEYKFASVCVN---P--------TWVPLCAELLKG--TGVKVCTVIGFPLGATPSEVKAYETKVAVE 106 (239)
T ss_dssp CCHHHHHHHHHHHHHHTCSEEEEC---G--------GGHHHHHHHHTT--SSCEEEEEESTTTCCSCHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHhcCCcEEEEC---H--------HHHHHHHHHhCC--CCCeEEEEeccCCCCCchHHHHHHHHHHHH
Confidence 456889999999999999999982 1 122222233332 356665433 2222221 34555667
Q ss_pred cCCCeeecchhchHHHHhhhcCCCCCHHHHHHHHHHHHHhCCCCeEEEeeeeeCCCCHHHHHHHHHHHHhCCCCEEeeec
Q 018731 205 SGLDVFAHNIETVKRLQRIVRDPRAGYEQSLEVLKHAKLSKKGLITKSSIMLGLGESDDDLKEAMADLRSIDVDILTLGQ 284 (351)
Q Consensus 205 aG~~~i~~~ies~~~~~~~~r~~~~~~~~~l~~i~~~~~~~~Gi~v~~~~IvGlgEt~e~~~~~l~~l~~lg~d~i~i~~ 284 (351)
.|.|.|-+-+.-. .++ ..+++.+++-|+.+++...+..++.-+=.|+ -|++++....+...+.|+|+|-.+
T Consensus 107 ~GAdEIDmViNig-----~lk--~g~~~~v~~eI~~v~~a~~~~~lKVIlEt~~-Lt~eei~~a~~ia~~aGADfVKTS- 177 (239)
T 3ngj_A 107 QGAEEVDMVINIG-----MVK--AKKYDDVEKDVKAVVDASGKALTKVIIECCY-LTNEEKVEVCKRCVAAGAEYVKTS- 177 (239)
T ss_dssp TTCSEEEEECCHH-----HHH--TTCHHHHHHHHHHHHHHHTTSEEEEECCGGG-SCHHHHHHHHHHHHHHTCSEEECC-
T ss_pred cCCCEEEEEeehH-----Hhc--cccHHHHHHHHHHHHHHhcCCceEEEEecCC-CCHHHHHHHHHHHHHHCcCEEECC-
Confidence 7999886533222 112 4577878888888877555654444333344 478899999999999999998773
Q ss_pred ccCCCCCcccccCCCCHHHHHHHHHHH
Q 018731 285 YLQPTPLHLTVKEYVTPEKFDFWKAYG 311 (351)
Q Consensus 285 ~l~PTp~~~~~~~~v~~~e~~~~~~~~ 311 (351)
|.+. ....+.++.+.+++..
T Consensus 178 ----TGf~---~ggAt~~dv~lmr~~v 197 (239)
T 3ngj_A 178 ----TGFG---THGATPEDVKLMKDTV 197 (239)
T ss_dssp ----CSSS---SCCCCHHHHHHHHHHH
T ss_pred ----CCCC---CCCCCHHHHHHHHHhh
Confidence 3322 1234556666666544
No 246
>3m9y_A Triosephosphate isomerase; TIM barrel, glycolysis, gluconeogenesis, pentose; HET: CIT; 1.90A {Staphylococcus aureus} SCOP: c.1.1.1 PDB: 3uwv_A* 3uwu_A* 3uww_A* 3uwy_A 3uwz_A*
Probab=56.82 E-value=1e+02 Score=27.00 Aligned_cols=88 Identities=11% Similarity=0.091 Sum_probs=52.1
Q ss_pred HHHHHHHHHHHH-hCCCcEEEEeec----CCCCC-HHHHHHHHHcCCCeeecchhchHHHHhhhcCCCCCHHHHHHHHHH
Q 018731 167 GHFARTVKAMKK-QKPDIMVECLTS----DFRGD-LRAVETLVHSGLDVFAHNIETVKRLQRIVRDPRAGYEQSLEVLKH 240 (351)
Q Consensus 167 ~~~~~li~~ik~-~~p~i~i~~~~~----~~~~~-~e~l~~L~~aG~~~i~~~ies~~~~~~~~r~~~~~~~~~l~~i~~ 240 (351)
.++..+.+.+++ ...++.+.+..- .+..+ +=-...|+++|++.+-+|- ..+|.+- +.+-+.+-+.++.
T Consensus 45 ~~L~~v~~~~~~~~~~~i~vgAQn~~~~~~GA~TGEiS~~mL~d~G~~~ViiGH----SERR~~f--~Etd~~V~~Kv~~ 118 (254)
T 3m9y_A 45 IQLDALTTAVKEGKAQGLEIGAQNTYFEDNGAFTGETSPVALADLGVKYVVIGH----SERRELF--HETDEEINKKAHA 118 (254)
T ss_dssp HHHHHHHHHHHTTSSTTCEEEESCCCSSSSBSCTTCCCHHHHHHTTCCEEEESC----HHHHHHS--CCCHHHHHHHHHH
T ss_pred HHHHHHHHHHhhcCCCcceEEecccccccCCCccCcCCHHHHHHcCCCEEEECc----ccccCcc--CCCHHHHHHHHHH
Confidence 456666666531 123466654221 11112 2235678899999998762 2233332 4566677777888
Q ss_pred HHHhCCCCeEEEeeeeeCCCCHHHHH
Q 018731 241 AKLSKKGLITKSSIMLGLGESDDDLK 266 (351)
Q Consensus 241 ~~~~~~Gi~v~~~~IvGlgEt~e~~~ 266 (351)
+.+ .|+. .|+-.|||.++..
T Consensus 119 Al~--~GL~----pIlCvGEtleere 138 (254)
T 3m9y_A 119 IFK--HGMT----PIICVGETDEERE 138 (254)
T ss_dssp HHH--TTCE----EEEEECCCHHHHH
T ss_pred HHH--CCCE----EEEEcCCcHHHHH
Confidence 888 8986 3566699988654
No 247
>2f6u_A GGGPS, (S)-3-O-geranylgeranylglyceryl phosphate synthase; non-canonical TIM-barrel, prenyltransferase, archaeal lipid synthesis, dimer; HET: CIT; 1.55A {Archaeoglobus fulgidus} SCOP: c.1.4.1 PDB: 2f6x_A*
Probab=56.47 E-value=53 Score=28.43 Aligned_cols=124 Identities=15% Similarity=0.157 Sum_probs=73.6
Q ss_pred EEEEeecCCCCCHHHHHHHHHcCCCeeecchhchHHHHhhhcCCCCCHHHHHHHHHHHHHhCCCCeE-------------
Q 018731 184 MVECLTSDFRGDLRAVETLVHSGLDVFAHNIETVKRLQRIVRDPRAGYEQSLEVLKHAKLSKKGLIT------------- 250 (351)
Q Consensus 184 ~i~~~~~~~~~~~e~l~~L~~aG~~~i~~~ies~~~~~~~~r~~~~~~~~~l~~i~~~~~~~~Gi~v------------- 250 (351)
.+.+.-|+...+.+.++.|.++|.|.|-+|. | .+.+.++.++.++.+++ ..+.+
T Consensus 11 ~it~gDP~~~~t~~~~~~l~~~GaD~IelG~-S----------~g~t~~~~~~~v~~ir~--~~~Pivl~~y~~n~i~~g 77 (234)
T 2f6u_A 11 HITKLDPDRTNTDEIIKAVADSGTDAVMISG-T----------QNVTYEKARTLIEKVSQ--YGLPIVVEPSDPSNVVYD 77 (234)
T ss_dssp EEEEECTTSCCCHHHHHHHHTTTCSEEEECC-C----------TTCCHHHHHHHHHHHTT--SCCCEEECCSSCCCCCCC
T ss_pred EEEeeCCCccccHHHHHHHHHcCCCEEEECC-C----------CCCCHHHHHHHHHHhcC--CCCCEEEecCCcchhhcC
Confidence 4555556655678889999999999998886 1 25678888888888876 44331
Q ss_pred -EEeeeeeC-CCCHHHHH-----HHHHHH----HhCC-----CCEEeeeccc-CCCC----CcccccCCCCHHHHHHHHH
Q 018731 251 -KSSIMLGL-GESDDDLK-----EAMADL----RSID-----VDILTLGQYL-QPTP----LHLTVKEYVTPEKFDFWKA 309 (351)
Q Consensus 251 -~~~~IvGl-gEt~e~~~-----~~l~~l----~~lg-----~d~i~i~~~l-~PTp----~~~~~~~~v~~~e~~~~~~ 309 (351)
..-++.-+ .|..+++. +.+..+ ++.| ++.+.....+ .|+. +.. .....+++....+.+
T Consensus 78 vDg~iipdLp~ee~~~~~~g~~~~~~~~~~~~~~~~g~~~~~l~~I~~gYil~~P~~~~~rl~~-g~~~~~~e~~~~~a~ 156 (234)
T 2f6u_A 78 VDYLFVPTVLNSADGDWITGKHAQWVRMHYENLQKFTEIIESEFIQIEGYIVLNPDSAVARVTK-ALCNIDKELAASYAL 156 (234)
T ss_dssp SSEEEEEEETTBSBGGGTTHHHHHHHHTTGGGHHHHHHHHHSTTEEEEEEEECCTTSHHHHHTT-BCCCCCHHHHHHHHH
T ss_pred CCEEEEcccCCCCCHHHHhhhHHHHHHhhhhhHHHcCCcccceeeeecceEEECCCCceEEeec-CCCCCCHHHHHHHHH
Confidence 11222333 34455555 444322 6677 8888864222 5532 110 112246777888888
Q ss_pred HHHh-c--Ccceecc
Q 018731 310 YGES-I--GFRYVAS 321 (351)
Q Consensus 310 ~~~~-~--G~~~~~~ 321 (351)
.+.+ + ||-|..+
T Consensus 157 ~g~~~l~~~~Vyl~~ 171 (234)
T 2f6u_A 157 VGEKLFNLPIIYIEY 171 (234)
T ss_dssp HHHHTTCCSEEEEEC
T ss_pred hhhhhcCCCEEEEeC
Confidence 7764 5 6666543
No 248
>2i5g_A Amidohydrolase; NYSGXRC, NYSGXRC-9311A, PSI2, structural genomics, protein structure initiative; 2.60A {Pseudomonas aeruginosa}
Probab=56.19 E-value=39 Score=30.79 Aligned_cols=132 Identities=19% Similarity=0.327 Sum_probs=73.2
Q ss_pred HHHHHHHhCCCcEEEEeccCCCCC------CCCcHHHH-HHHHHHHHHhCCCcEEEEeecCCCCCHHHHHHHHHcCCC-e
Q 018731 138 NTAKAIASWGVDYIVLTSVDRDDI------PDGGSGHF-ARTVKAMKKQKPDIMVECLTSDFRGDLRAVETLVHSGLD-V 209 (351)
Q Consensus 138 ~~~~~~~~~G~~~I~ltgg~~~~l------~~~~~~~~-~~li~~ik~~~p~i~i~~~~~~~~~~~e~l~~L~~aG~~-~ 209 (351)
+.++.+.+.|++.+.+|=.....+ .+.++..+ .++++++.+. ++-|.+... ......+.+.-+..- .
T Consensus 103 ~~l~~~y~lGvR~~~Lt~n~~N~~~~g~~~~~~GLT~~G~~vV~emnrl--GmivDlSH~---s~~~~~dvl~~s~~Pvi 177 (325)
T 2i5g_A 103 GYVEVFKQLGVGIVQMCYNTQNLVGTGCYERDGGLSGFGREIVAEMNRV--GIMCDLSHV---GSKTSEEVILESKKPVC 177 (325)
T ss_dssp HHHHHHHHTTEEEEESCCSSBCSSCBBTTSCCCCCCHHHHHHHHHHHHH--TCEEECTTB---CHHHHHHHHHHCSSCCE
T ss_pred HHHHHHHHcCCeEEEeeccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHc--CcEEEcCcC---CHHHHHHHHHHhCCCEE
Confidence 356777889999998873110001 23344444 4688888876 777776321 123344444444322 2
Q ss_pred eecchhchHHHHhhhcCCCCCHHHHHHHHHHHHHhCCCCeEEEeeeeeC-----CCCHHHHHHHHHHHHh-CCCCEEeee
Q 018731 210 FAHNIETVKRLQRIVRDPRAGYEQSLEVLKHAKLSKKGLITKSSIMLGL-----GESDDDLKEAMADLRS-IDVDILTLG 283 (351)
Q Consensus 210 i~~~ies~~~~~~~~r~~~~~~~~~l~~i~~~~~~~~Gi~v~~~~IvGl-----gEt~e~~~~~l~~l~~-lg~d~i~i~ 283 (351)
++|+- ...+.. .++.-.++.+++| .+ .|=-+..++.-++ .-|.+++.++++.+.+ .|+++|.++
T Consensus 178 ~SHsn--~~al~~---h~RNl~De~iral---a~--~GGvigv~~~~~fl~~~~~~t~~~~~~hi~~i~~~~G~dhVgiG 247 (325)
T 2i5g_A 178 YSHCL--PSGLKE---HPRNKSDEELKFI---AD--HGGFVGVTMFAPFLKKGIDSTIDDYAEAIEYVMNIVGEDAIGIG 247 (325)
T ss_dssp EEEEC--BTTTCC---CTTSBCHHHHHHH---HH--TTCEEEECCCGGGSSSGGGCBHHHHHHHHHHHHHHHCTTSEEEC
T ss_pred EeCCC--ccccCC---CCCCCCHHHHHHH---HH--cCCeEEEeecchhcCCCCCCCHHHHHHHHHHHHHhcCCceEEEC
Confidence 34421 111111 1233445555544 34 4444555555444 3579999999998866 689999886
Q ss_pred c
Q 018731 284 Q 284 (351)
Q Consensus 284 ~ 284 (351)
.
T Consensus 248 s 248 (325)
T 2i5g_A 248 T 248 (325)
T ss_dssp C
T ss_pred C
Confidence 3
No 249
>3ih1_A Methylisocitrate lyase; alpha-beta structure, TIM-barrel, center for structural GENO infectious diseases, csgid; 2.00A {Bacillus anthracis str} PDB: 3kz2_A
Probab=56.06 E-value=1.2e+02 Score=27.41 Aligned_cols=141 Identities=13% Similarity=0.035 Sum_probs=0.0
Q ss_pred HHHHHhCCCcEEEEec-------cCCCCCCCCcHHHHHHHHHHHHHhCCCcEEEEeecCCCCCH----HHHHHHHHcCCC
Q 018731 140 AKAIASWGVDYIVLTS-------VDRDDIPDGGSGHFARTVKAMKKQKPDIMVECLTSDFRGDL----RAVETLVHSGLD 208 (351)
Q Consensus 140 ~~~~~~~G~~~I~ltg-------g~~~~l~~~~~~~~~~li~~ik~~~p~i~i~~~~~~~~~~~----e~l~~L~~aG~~ 208 (351)
++.+.+.|++-|+++| |.++ ...-.++.+...++.|.+.. ++.|-+=-+.+..+. +.++.+.++|+.
T Consensus 42 A~l~e~aG~dai~vs~~s~a~~~G~pD-~~~vt~~em~~~~~~I~r~~-~~pviaD~d~Gyg~~~~v~~~v~~l~~aGaa 119 (305)
T 3ih1_A 42 ALVARNTGFLALYLSGAAYTASKGLPD-LGIVTSTEVAERARDLVRAT-DLPVLVDIDTGFGGVLNVARTAVEMVEAKVA 119 (305)
T ss_dssp HHHHHHTTCSCEEECHHHHHHHHTCCS-SSCSCHHHHHHHHHHHHHHH-CCCEEEECTTCSSSHHHHHHHHHHHHHTTCS
T ss_pred HHHHHHcCCCEEEECcHHHHHhCCCCC-CCcCCHHHHHHHHHHHHHhc-CCCEEEECCCCCCCHHHHHHHHHHHHHhCCc
Q ss_pred eeecchhchHHHHhhhcCCC-CCHHHHHHHHHHHHHhCCCCeEEEeeeeeCCCCHHHHHHHHHHHHhCCCCEEee
Q 018731 209 VFAHNIETVKRLQRIVRDPR-AGYEQSLEVLKHAKLSKKGLITKSSIMLGLGESDDDLKEAMADLRSIDVDILTL 282 (351)
Q Consensus 209 ~i~~~ies~~~~~~~~r~~~-~~~~~~l~~i~~~~~~~~Gi~v~~~~IvGlgEt~e~~~~~l~~l~~lg~d~i~i 282 (351)
.|.+-=+......-...++. .+.++..+.|+.+++...++.+.+-.=.-..+..++..+-.+...+.|.|.+.+
T Consensus 120 gv~iED~~~~krcGh~~gk~l~~~~e~~~rI~Aa~~A~~~~~I~ARtda~~~~g~~~ai~Ra~ay~eAGAD~i~~ 194 (305)
T 3ih1_A 120 AVQIEDQQLPKKCGHLNGKKLVTTEELVQKIKAIKEVAPSLYIVARTDARGVEGLDEAIERANAYVKAGADAIFP 194 (305)
T ss_dssp EEEEECBCSSCCTTCTTCCCBCCHHHHHHHHHHHHHHCTTSEEEEEECCHHHHCHHHHHHHHHHHHHHTCSEEEE
T ss_pred EEEECCCCCCcccCCCCCCcccCHHHHHHHHHHHHHcCCCeEEEEeeccccccCHHHHHHHHHHHHHcCCCEEEE
No 250
>3kts_A Glycerol uptake operon antiterminator regulatory; structural genomics, PSI-2, protein structur initiative; HET: UNL; 2.75A {Listeria monocytogenes str}
Probab=56.04 E-value=89 Score=26.12 Aligned_cols=109 Identities=16% Similarity=0.273 Sum_probs=70.2
Q ss_pred HHHHhCCCcEEEEeccCCCCCCCCcHHHHHHHHHHHHHhCCCcEEEE-eecCCCCCHHHHHHHHHc-CCCeeecchhchH
Q 018731 141 KAIASWGVDYIVLTSVDRDDIPDGGSGHFARTVKAMKKQKPDIMVEC-LTSDFRGDLRAVETLVHS-GLDVFAHNIETVK 218 (351)
Q Consensus 141 ~~~~~~G~~~I~ltgg~~~~l~~~~~~~~~~li~~ik~~~p~i~i~~-~~~~~~~~~e~l~~L~~a-G~~~i~~~ies~~ 218 (351)
+.+.+...+.+++.+|+- . .+.++++.+++.....-+.. +..+...++..++.|++. ++|.|
T Consensus 23 ~~al~s~~~~ifll~g~i---~-----~l~~~v~~lk~~~K~v~Vh~Dli~Gls~d~~ai~fL~~~~~pdGI-------- 86 (192)
T 3kts_A 23 EKILELDLTYMVMLETHV---A-----QLKALVKYAQAGGKKVLLHADLVNGLKNDDYAIDFLCTEICPDGI-------- 86 (192)
T ss_dssp HHHTTSSCCEEEECSEET---T-----THHHHHHHHHHTTCEEEEEGGGEETCCCSHHHHHHHHHTTCCSEE--------
T ss_pred HHHHcCCCCEEEEecCcH---H-----HHHHHHHHHHHcCCeEEEecCchhccCCcHHHHHHHHhCCCCCEE--------
Confidence 344456688888887753 2 57788889998742111211 012233478889999884 67765
Q ss_pred HHHhhhcCCCCCHHHHHHHHHHHHHhCCCCe-EEEeeeeeCCCCHHHHHHHHHHHHhCCCCEEeee
Q 018731 219 RLQRIVRDPRAGYEQSLEVLKHAKLSKKGLI-TKSSIMLGLGESDDDLKEAMADLRSIDVDILTLG 283 (351)
Q Consensus 219 ~~~~~~r~~~~~~~~~l~~i~~~~~~~~Gi~-v~~~~IvGlgEt~e~~~~~l~~l~~lg~d~i~i~ 283 (351)
+. .+ ...++.+++ .|+. +...|++ + -..+...++.+.+.++|.+-+.
T Consensus 87 -----Is-Tk------~~~i~~Ak~--~gL~tIqR~Fli---D-S~al~~~~~~i~~~~PD~iEiL 134 (192)
T 3kts_A 87 -----IS-TR------GNAIMKAKQ--HKMLAIQRLFMI---D-SSAYNKGVALIQKVQPDCIELL 134 (192)
T ss_dssp -----EE-SC------HHHHHHHHH--TTCEEEEEEECC---S-HHHHHHHHHHHHHHCCSEEEEE
T ss_pred -----Ee-Cc------HHHHHHHHH--CCCeEEEEEEEE---E-cchHHHHHHHHhhcCCCEEEEC
Confidence 11 11 367778888 9996 4444443 2 4456788899999999988774
No 251
>3iwp_A Copper homeostasis protein CUTC homolog; conserved sequence motif, metal-binding site, polymorphism, metal binding protein; 2.50A {Homo sapiens}
Probab=55.80 E-value=20 Score=32.23 Aligned_cols=71 Identities=17% Similarity=0.295 Sum_probs=44.6
Q ss_pred HHHHHHHHHhCCCcEEEEeccCCCCCCCCcHHHHHHHHHHHHHhCCCcEEEEeecCCCCCHHHHHHHHH-cCCCeeecch
Q 018731 136 PENTAKAIASWGVDYIVLTSVDRDDIPDGGSGHFARTVKAMKKQKPDIMVECLTSDFRGDLRAVETLVH-SGLDVFAHNI 214 (351)
Q Consensus 136 i~~~~~~~~~~G~~~I~ltgg~~~~l~~~~~~~~~~li~~ik~~~p~i~i~~~~~~~~~~~e~l~~L~~-aG~~~i~~~i 214 (351)
..+.++.+.+.|+..|.-+|+.++.+ .+.+.+.++++... ..+.| +..++. +.+-+..+.+ +|++.+..+.
T Consensus 168 ~~~Ale~Li~lGvdrILTSG~~~~a~--~Gl~~Lk~Lv~~a~---~rI~I--maGGGV-~~~Ni~~l~~~tG~~~~H~S~ 239 (287)
T 3iwp_A 168 PMAALETLLTLGFERVLTSGCDSSAL--EGLPLIKRLIEQAK---GRIVV--MPGGGI-TDRNLQRILEGSGATEFHCSA 239 (287)
T ss_dssp HHHHHHHHHHHTCSEEEECTTSSSTT--TTHHHHHHHHHHHT---TSSEE--EECTTC-CTTTHHHHHHHHCCSEEEECC
T ss_pred HHHHHHHHHHcCCCEEECCCCCCChH--HhHHHHHHHHHHhC---CCCEE--EECCCc-CHHHHHHHHHhhCCCEEeECc
Confidence 34556666777999998888765432 34666666655432 23444 334454 6666666655 9999998764
No 252
>3na8_A Putative dihydrodipicolinate synthetase; lyase; HET: MSE; 1.85A {Pseudomonas aeruginosa}
Probab=55.76 E-value=14 Score=33.64 Aligned_cols=79 Identities=11% Similarity=-0.010 Sum_probs=50.4
Q ss_pred CCCchhHHHHHHHHHhCCCcEEEEec--cCCCCCCCCcHHHHHHHHHHHHHhCC-CcEEEEeecCCCCCH---HHHHHHH
Q 018731 130 PPDPMEPENTAKAIASWGVDYIVLTS--VDRDDIPDGGSGHFARTVKAMKKQKP-DIMVECLTSDFRGDL---RAVETLV 203 (351)
Q Consensus 130 ~~~~eei~~~~~~~~~~G~~~I~ltg--g~~~~l~~~~~~~~~~li~~ik~~~p-~i~i~~~~~~~~~~~---e~l~~L~ 203 (351)
..+.+...+.++.+.+.|++.+++.| |+...|. .+.-.++++.+.+... .+.|-+-+. ...+. +..+...
T Consensus 41 ~iD~~~l~~lv~~li~~Gv~Gi~v~GtTGE~~~Ls---~~Er~~v~~~~v~~~~grvpViaGvg-~~~t~~ai~la~~A~ 116 (315)
T 3na8_A 41 GLDLPALGRSIERLIDGGVHAIAPLGSTGEGAYLS---DPEWDEVVDFTLKTVAHRVPTIVSVS-DLTTAKTVRRAQFAE 116 (315)
T ss_dssp SBCHHHHHHHHHHHHHTTCSEEECSSGGGTGGGSC---HHHHHHHHHHHHHHHTTSSCBEEECC-CSSHHHHHHHHHHHH
T ss_pred CcCHHHHHHHHHHHHHcCCCEEEECccccChhhCC---HHHHHHHHHHHHHHhCCCCcEEEecC-CCCHHHHHHHHHHHH
Confidence 45677888999999999999998865 4544455 3556667766665422 233322221 11133 5566677
Q ss_pred HcCCCeeec
Q 018731 204 HSGLDVFAH 212 (351)
Q Consensus 204 ~aG~~~i~~ 212 (351)
++|.|.+.+
T Consensus 117 ~~Gadavlv 125 (315)
T 3na8_A 117 SLGAEAVMV 125 (315)
T ss_dssp HTTCSEEEE
T ss_pred hcCCCEEEE
Confidence 889999864
No 253
>3fkr_A L-2-keto-3-deoxyarabonate dehydratase; DHDPS/NAL family, complex, pyruvate, lyase; HET: KPI; 1.80A {Azospirillum brasilense} PDB: 3fkk_A
Probab=55.71 E-value=17 Score=32.94 Aligned_cols=79 Identities=10% Similarity=0.031 Sum_probs=50.3
Q ss_pred CCCchhHHHHHHHHHhCCCcEEEEec--cCCCCCCCCcHHHHHHHHHHHHHhC-CCcEEEEeecCCCCCH---HHHHHHH
Q 018731 130 PPDPMEPENTAKAIASWGVDYIVLTS--VDRDDIPDGGSGHFARTVKAMKKQK-PDIMVECLTSDFRGDL---RAVETLV 203 (351)
Q Consensus 130 ~~~~eei~~~~~~~~~~G~~~I~ltg--g~~~~l~~~~~~~~~~li~~ik~~~-p~i~i~~~~~~~~~~~---e~l~~L~ 203 (351)
..+.+...+.++.+.+.|++.+++.| |+...|. .+.-.++++.+.+.. ..+.|-+-+. ...+. +..+...
T Consensus 25 ~iD~~~l~~lv~~li~~Gv~gl~v~GtTGE~~~Ls---~~Er~~v~~~~~~~~~grvpviaGvg-~~~t~~ai~la~~A~ 100 (309)
T 3fkr_A 25 DLDLASQKRAVDFMIDAGSDGLCILANFSEQFAIT---DDERDVLTRTILEHVAGRVPVIVTTS-HYSTQVCAARSLRAQ 100 (309)
T ss_dssp SBCHHHHHHHHHHHHHTTCSCEEESSGGGTGGGSC---HHHHHHHHHHHHHHHTTSSCEEEECC-CSSHHHHHHHHHHHH
T ss_pred CcCHHHHHHHHHHHHHcCCCEEEECccccCcccCC---HHHHHHHHHHHHHHhCCCCcEEEecC-CchHHHHHHHHHHHH
Confidence 35667788999999999999998865 5544455 355566666665542 2344433222 11233 5566677
Q ss_pred HcCCCeeec
Q 018731 204 HSGLDVFAH 212 (351)
Q Consensus 204 ~aG~~~i~~ 212 (351)
++|.|.+.+
T Consensus 101 ~~Gadavlv 109 (309)
T 3fkr_A 101 QLGAAMVMA 109 (309)
T ss_dssp HTTCSEEEE
T ss_pred HcCCCEEEE
Confidence 889999854
No 254
>3s5o_A 4-hydroxy-2-oxoglutarate aldolase, mitochondrial; beta barrel, schiff base, hydroxyproline metabolis; HET: KPI; 1.97A {Homo sapiens} SCOP: c.1.10.0 PDB: 3s5n_A
Probab=55.62 E-value=27 Score=31.47 Aligned_cols=79 Identities=10% Similarity=0.091 Sum_probs=52.3
Q ss_pred CCCchhHHHHHHHHHhCCCcEEEEec--cCCCCCCCCcHHHHHHHHHHHHHhCC-CcEEEEeecCCCCCH---HHHHHHH
Q 018731 130 PPDPMEPENTAKAIASWGVDYIVLTS--VDRDDIPDGGSGHFARTVKAMKKQKP-DIMVECLTSDFRGDL---RAVETLV 203 (351)
Q Consensus 130 ~~~~eei~~~~~~~~~~G~~~I~ltg--g~~~~l~~~~~~~~~~li~~ik~~~p-~i~i~~~~~~~~~~~---e~l~~L~ 203 (351)
..+.+...+.++.+.+.|++.+++.| |+...|. .+.-.++++.+.+... .+.|-+-+. ...+. +..+...
T Consensus 31 ~iD~~~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls---~~Er~~v~~~~~~~~~gr~pviaGvg-~~~t~~ai~la~~A~ 106 (307)
T 3s5o_A 31 EVDYGKLEENLHKLGTFPFRGFVVQGSNGEFPFLT---SSERLEVVSRVRQAMPKNRLLLAGSG-CESTQATVEMTVSMA 106 (307)
T ss_dssp CBCHHHHHHHHHHHTTSCCSEEEESSGGGTGGGSC---HHHHHHHHHHHHHTSCTTSEEEEECC-CSSHHHHHHHHHHHH
T ss_pred CcCHHHHHHHHHHHHHcCCCEEEECccccchhhCC---HHHHHHHHHHHHHHcCCCCcEEEecC-CCCHHHHHHHHHHHH
Confidence 35667788899999999999999866 4544455 4666778887777543 345433222 11233 5556677
Q ss_pred HcCCCeeec
Q 018731 204 HSGLDVFAH 212 (351)
Q Consensus 204 ~aG~~~i~~ 212 (351)
++|.|.+.+
T Consensus 107 ~~Gadavlv 115 (307)
T 3s5o_A 107 QVGADAAMV 115 (307)
T ss_dssp HTTCSEEEE
T ss_pred HcCCCEEEE
Confidence 889999864
No 255
>3l21_A DHDPS, dihydrodipicolinate synthase; DAPA, dimer, RV2753C, lysine biosynthesis, amino-acid biosynthesis, diaminopimelate biosynthesis; HET: KPI CME; 2.10A {Mycobacterium tuberculosis} SCOP: c.1.10.1 PDB: 1xxx_A
Probab=55.51 E-value=18 Score=32.59 Aligned_cols=79 Identities=13% Similarity=0.094 Sum_probs=51.3
Q ss_pred CCCchhHHHHHHHHHhCCCcEEEEec--cCCCCCCCCcHHHHHHHHHHHHHhC-CCcEEEEeecCCCCCH---HHHHHHH
Q 018731 130 PPDPMEPENTAKAIASWGVDYIVLTS--VDRDDIPDGGSGHFARTVKAMKKQK-PDIMVECLTSDFRGDL---RAVETLV 203 (351)
Q Consensus 130 ~~~~eei~~~~~~~~~~G~~~I~ltg--g~~~~l~~~~~~~~~~li~~ik~~~-p~i~i~~~~~~~~~~~---e~l~~L~ 203 (351)
..+.+...+.++.+.+.|++.+++.| |+...|. .+.-.++++.+.+.. ..+.|-+-+. ...+. +..+...
T Consensus 32 ~iD~~~l~~lv~~li~~Gv~gi~v~GttGE~~~Lt---~~Er~~v~~~~~~~~~grvpviaGvg-~~~t~~ai~la~~a~ 107 (304)
T 3l21_A 32 SLDTATAARLANHLVDQGCDGLVVSGTTGESPTTT---DGEKIELLRAVLEAVGDRARVIAGAG-TYDTAHSIRLAKACA 107 (304)
T ss_dssp CBCHHHHHHHHHHHHHTTCSEEEESSTTTTGGGSC---HHHHHHHHHHHHHHHTTTSEEEEECC-CSCHHHHHHHHHHHH
T ss_pred CcCHHHHHHHHHHHHHcCCCEEEeCccccchhhCC---HHHHHHHHHHHHHHhCCCCeEEEeCC-CCCHHHHHHHHHHHH
Confidence 45677888999999999999999866 4444444 456667777666542 2355543222 11233 5566677
Q ss_pred HcCCCeeec
Q 018731 204 HSGLDVFAH 212 (351)
Q Consensus 204 ~aG~~~i~~ 212 (351)
++|.|.+.+
T Consensus 108 ~~Gadavlv 116 (304)
T 3l21_A 108 AEGAHGLLV 116 (304)
T ss_dssp HHTCSEEEE
T ss_pred HcCCCEEEE
Confidence 789999864
No 256
>3zwt_A Dihydroorotate dehydrogenase (quinone), mitochond; oxidoreductase; HET: FMN ORO KFZ; 1.55A {Homo sapiens} PDB: 1d3h_A* 2bxv_A* 2prh_A* 2prl_A* 2prm_A* 3f1q_A* 3fj6_A* 3fjl_A* 3g0u_A* 3g0x_A* 3zws_A* 1d3g_A* 3u2o_A* 2fpv_A* 2fpt_A* 2fpy_A* 2fqi_A* 3kvl_A* 3kvk_A* 3kvj_A* ...
Probab=55.47 E-value=47 Score=30.83 Aligned_cols=79 Identities=13% Similarity=0.194 Sum_probs=52.2
Q ss_pred chhHHHHHHHHHhCCCcEEEEeccCCC--C-----CC--CCc------HHHHHHHHHHHHHhCC-CcEEEEeecCCCCCH
Q 018731 133 PMEPENTAKAIASWGVDYIVLTSVDRD--D-----IP--DGG------SGHFARTVKAMKKQKP-DIMVECLTSDFRGDL 196 (351)
Q Consensus 133 ~eei~~~~~~~~~~G~~~I~ltgg~~~--~-----l~--~~~------~~~~~~li~~ik~~~p-~i~i~~~~~~~~~~~ 196 (351)
.+++.+.++.+.+.|++.|++++.... . +. .++ .+.-.++++.+++..+ ++.|- ..++..+.
T Consensus 233 ~~~~~~ia~~~~~aGadgi~v~ntt~~r~~~~~~~~~~~~gGlSG~~i~p~a~~~v~~i~~~v~~~ipvI--~~GGI~s~ 310 (367)
T 3zwt_A 233 SQDKEDIASVVKELGIDGLIVTNTTVSRPAGLQGALRSETGGLSGKPLRDLSTQTIREMYALTQGRVPII--GVGGVSSG 310 (367)
T ss_dssp HHHHHHHHHHHHHHTCCEEEECCCBSCCCTTCCCTTTTSSSEEEEGGGHHHHHHHHHHHHHHTTTCSCEE--EESSCCSH
T ss_pred HHHHHHHHHHHHHcCCCEEEEeCCCcccccccccccccccCCcCCcccchhHHHHHHHHHHHcCCCceEE--EECCCCCH
Confidence 357788888888999999998653310 0 00 011 1334588888888764 45543 34566677
Q ss_pred HHHHHHHHcCCCeeecc
Q 018731 197 RAVETLVHSGLDVFAHN 213 (351)
Q Consensus 197 e~l~~L~~aG~~~i~~~ 213 (351)
+.+..+.++|.+.|.++
T Consensus 311 ~da~~~l~~GAd~V~vg 327 (367)
T 3zwt_A 311 QDALEKIRAGASLVQLY 327 (367)
T ss_dssp HHHHHHHHHTCSEEEES
T ss_pred HHHHHHHHcCCCEEEEC
Confidence 77777778999999875
No 257
>3b40_A PVDM, probable dipeptidase; structural genomics, hydrolase, PSI-2, protein structure initiative; 2.00A {Pseudomonas aeruginosa}
Probab=55.44 E-value=93 Score=29.36 Aligned_cols=55 Identities=11% Similarity=0.076 Sum_probs=34.9
Q ss_pred CHHHHHHHHHHHHh-CCCCEEeeecccCCCCCcccccCCCCHHHHHHHHHHHHhcCcce
Q 018731 261 SDDDLKEAMADLRS-IDVDILTLGQYLQPTPLHLTVKEYVTPEKFDFWKAYGESIGFRY 318 (351)
Q Consensus 261 t~e~~~~~l~~l~~-lg~d~i~i~~~l~PTp~~~~~~~~v~~~e~~~~~~~~~~~G~~~ 318 (351)
|.+++.++++.+.+ .|+|+|.++.=+--.. .....-+..++-.+.+.+.+.||..
T Consensus 334 tl~~~~~Hidhi~~~~G~dhVGiGsDfDG~~---~~~gl~dvs~~p~l~~~L~~rG~se 389 (417)
T 3b40_A 334 GLKELVDAIDYTVKKVGIDHVGISSDFNDGG---GVDGWKDVSEIRNVTAELITRGYSD 389 (417)
T ss_dssp BHHHHHHHHHHHHHHHCGGGEEEECCBTTTC---CBBTBCSGGGHHHHHHHHHHHTCCH
T ss_pred CHHHHHHHHHHHHHhhCCCeEEEcCCCCCCC---CCCCCCCHHHHHHHHHHHHhcCCCH
Confidence 67888999888766 5899998873220010 0123345566777777777778754
No 258
>3u0h_A Xylose isomerase domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, TIM barrel; 2.30A {Alicyclobacillus acidocaldarius subsp}
Probab=55.44 E-value=28 Score=30.05 Aligned_cols=77 Identities=13% Similarity=0.111 Sum_probs=41.0
Q ss_pred HHHHHHHHHcCCCeeecchhchHHHHhhhcCCCCCHHHHHHHHHHHHHhCCCCeEEE-eeeeeCCCCH-------HHHHH
Q 018731 196 LRAVETLVHSGLDVFAHNIETVKRLQRIVRDPRAGYEQSLEVLKHAKLSKKGLITKS-SIMLGLGESD-------DDLKE 267 (351)
Q Consensus 196 ~e~l~~L~~aG~~~i~~~ies~~~~~~~~r~~~~~~~~~l~~i~~~~~~~~Gi~v~~-~~IvGlgEt~-------e~~~~ 267 (351)
++.++.++++|++.|-+........ .. ..+.+++. +.+.+ .|+.+.+ .....+.... +.+.+
T Consensus 19 ~~~l~~~~~~G~~~vEl~~~~~~~~---~~--~~~~~~~~---~~l~~--~gl~~~~~~~~~~~~~~~~~~~~~~~~~~~ 88 (281)
T 3u0h_A 19 VLYLDLARETGYRYVDVPFHWLEAE---AE--RHGDAAVE---AMFQR--RGLVLANLGLPLNLYDSEPVFLRELSLLPD 88 (281)
T ss_dssp HHHHHHHHHTTCSEECCCHHHHHHH---HH--HHCHHHHH---HHHHT--TTCEECCEECCSCTTSCHHHHHHHHHTHHH
T ss_pred HHHHHHHHHcCCCEEEecHHHHHHH---hc--ccCHHHHH---HHHHH--cCCceEEecccccccCCCHHHHHHHHHHHH
Confidence 5788888888888886654332211 00 11233332 33445 7877532 2222332222 23455
Q ss_pred HHHHHHhCCCCEEee
Q 018731 268 AMADLRSIDVDILTL 282 (351)
Q Consensus 268 ~l~~l~~lg~d~i~i 282 (351)
.++.+.++|+..+.+
T Consensus 89 ~i~~A~~lG~~~v~~ 103 (281)
T 3u0h_A 89 RARLCARLGARSVTA 103 (281)
T ss_dssp HHHHHHHTTCCEEEE
T ss_pred HHHHHHHcCCCEEEE
Confidence 677777888887765
No 259
>3o63_A Probable thiamine-phosphate pyrophosphorylase; thiamin biosynthesis, TIM barrel, transferase; 2.35A {Mycobacterium tuberculosis}
Probab=55.28 E-value=1e+02 Score=26.62 Aligned_cols=117 Identities=17% Similarity=0.225 Sum_probs=62.9
Q ss_pred hHHHHHHHHHhCCCcEEEEeccCCC------CCCCCcHHHHHHHHHHHHHhC--CCcEEEEeecCCCCCHHHHHHHHHcC
Q 018731 135 EPENTAKAIASWGVDYIVLTSVDRD------DIPDGGSGHFARTVKAMKKQK--PDIMVECLTSDFRGDLRAVETLVHSG 206 (351)
Q Consensus 135 ei~~~~~~~~~~G~~~I~ltgg~~~------~l~~~~~~~~~~li~~ik~~~--p~i~i~~~~~~~~~~~e~l~~L~~aG 206 (351)
...+.++.+.+.|++.|.|---+.+ .++ ...+.++++.+++.. -++.+- .++ .++..+++|
T Consensus 44 ~~~~~~~~al~~Gv~~vqlR~K~~~~~~~~~~l~---~~~~~~~a~~l~~l~~~~~~~li--Ind------~~~lA~~~g 112 (243)
T 3o63_A 44 DLAQFAEAALAGGVDIIQLRDKGSPGELRFGPLQ---ARDELAACEILADAAHRYGALFA--VND------RADIARAAG 112 (243)
T ss_dssp CHHHHHHHHHHTTCSEEEECCTTCHHHHHHCSCC---HHHHHHHHHHHHHHHHHTTCEEE--EES------CHHHHHHHT
T ss_pred hHHHHHHHHHHCCCCEEEEccCCCCccccccCCC---HHHHHHHHHHHHHHHHhhCCEEE--EeC------HHHHHHHhC
Confidence 3566677777889999988321100 022 245555555555431 144442 232 223466789
Q ss_pred CCeeecchhchHHHHhhhcCCCCCHHHHHHHHHHHHHhCCCCeEEEeeeeeC-CCCHHHHHHHHHHHHhCCCCEEeeecc
Q 018731 207 LDVFAHNIETVKRLQRIVRDPRAGYEQSLEVLKHAKLSKKGLITKSSIMLGL-GESDDDLKEAMADLRSIDVDILTLGQY 285 (351)
Q Consensus 207 ~~~i~~~ies~~~~~~~~r~~~~~~~~~l~~i~~~~~~~~Gi~v~~~~IvGl-gEt~e~~~~~l~~l~~lg~d~i~i~~~ 285 (351)
.|.|.++.+.... ..++.+.. ++. ++|. -.|.+++.+ ..+.|+|.+.++++
T Consensus 113 AdGVHLg~~dl~~----------------~~~r~~~~--~~~------~iG~S~ht~~Ea~~----A~~~GaDyI~vgpv 164 (243)
T 3o63_A 113 ADVLHLGQRDLPV----------------NVARQILA--PDT------LIGRSTHDPDQVAA----AAAGDADYFCVGPC 164 (243)
T ss_dssp CSEEEECTTSSCH----------------HHHHHHSC--TTC------EEEEEECSHHHHHH----HHHSSCSEEEECCS
T ss_pred CCEEEecCCcCCH----------------HHHHHhhC--CCC------EEEEeCCCHHHHHH----HhhCCCCEEEEcCc
Confidence 9999877433211 11222222 333 4555 467777544 34589999999754
Q ss_pred cCCCCC
Q 018731 286 LQPTPL 291 (351)
Q Consensus 286 l~PTp~ 291 (351)
+ ||..
T Consensus 165 f-~T~t 169 (243)
T 3o63_A 165 W-PTPT 169 (243)
T ss_dssp S-CCCC
T ss_pred c-CCCC
Confidence 3 6543
No 260
>1itu_A Renal dipeptidase; glycoprotein, membrane-bound, zinc protease BET lactamase, cilastatin, complex (hydrolase-inhibitor), hydro; HET: NAG CIL; 2.00A {Homo sapiens} SCOP: c.1.9.7 PDB: 1itq_A*
Probab=55.23 E-value=54 Score=30.46 Aligned_cols=160 Identities=15% Similarity=0.199 Sum_probs=85.3
Q ss_pred HHHHHHHhCCCcEEEEeccCCCCC-------------CCCcHHHH-HHHHHHHHHhCCCcEEEEeecCCCCCH-HHHHHH
Q 018731 138 NTAKAIASWGVDYIVLTSVDRDDI-------------PDGGSGHF-ARTVKAMKKQKPDIMVECLTSDFRGDL-RAVETL 202 (351)
Q Consensus 138 ~~~~~~~~~G~~~I~ltgg~~~~l-------------~~~~~~~~-~~li~~ik~~~p~i~i~~~~~~~~~~~-e~l~~L 202 (351)
+.++.+.+.|++.+.+|-..+..+ .++++..+ .++++++.+. ++-|.+.. .++ ...+.+
T Consensus 135 ~~L~~~y~lGvR~~~Lthn~~N~~a~~~~~~~~~~~~~~~GLT~~G~~vV~emnrl--GmivDlSH----~s~~~~~dvl 208 (369)
T 1itu_A 135 GVLRALYQLGMRYLTLTHSCNTPWADNWLVDTGDSEPQSQGLSPFGQRVVKELNRL--GVLIDLAH----VSVATMKATL 208 (369)
T ss_dssp HHHHHHHHTTEEEEESCSSSCCSSBCBGGGGGTSSCCSSSSBCHHHHHHHHHHHHH--TCEEECTT----BCHHHHHHHH
T ss_pred HHHHHHHHcCCeEEEeecccCCcccccccccCCCCcccCCCcCHhHHHHHHHHHHc--CCEEEcCC----CCHHHHHHHH
Confidence 456777899999998874222111 11234344 4678888776 67776533 233 344444
Q ss_pred HHcCCCe-eecchhchHHHHhhhcCCCCCHHHHHHHHHHHHHhCCCCeEEEeeeeeC-C----CCHHHHHHHHHHHHh-C
Q 018731 203 VHSGLDV-FAHNIETVKRLQRIVRDPRAGYEQSLEVLKHAKLSKKGLITKSSIMLGL-G----ESDDDLKEAMADLRS-I 275 (351)
Q Consensus 203 ~~aG~~~-i~~~ies~~~~~~~~r~~~~~~~~~l~~i~~~~~~~~Gi~v~~~~IvGl-g----Et~e~~~~~l~~l~~-l 275 (351)
.-+..-. ++|+ +...+.. .++.-.++.+++|. + .|=-+..++.-.+ + -|.+++.++++.+.+ .
T Consensus 209 ~~s~~PviaSHS--n~ral~~---h~RNl~De~l~~la---~--~GGvigv~~~~~fl~~~~~~t~~~~~~hi~hi~~~~ 278 (369)
T 1itu_A 209 QLSRAPVIFSHS--SAYSVCA---SRRNVPDDVLRLVK---Q--TDSLVMVNFYNNYISCTNKANLSQVADHLDHIKEVA 278 (369)
T ss_dssp HHCSSCCEESSC--CBTTTSC---CTTSBCHHHHHHHH---H--HTCEEEECCCHHHHTSSSCCBHHHHHHHHHHHHHHH
T ss_pred HhcCCCEEEeCC--ChhhcCC---CCCCCCHHHHHHHH---H--cCCeEEEEechhhcCCCCCCCHHHHHHHHHHHHHhh
Confidence 4443222 2342 1111211 12333455555543 3 3333555555444 2 489999999999877 5
Q ss_pred CCCEEeeeccc--CC-CCCcccccCCCCHHHHHHHHHHHHhcCcce
Q 018731 276 DVDILTLGQYL--QP-TPLHLTVKEYVTPEKFDFWKAYGESIGFRY 318 (351)
Q Consensus 276 g~d~i~i~~~l--~P-Tp~~~~~~~~v~~~e~~~~~~~~~~~G~~~ 318 (351)
|+++|.++.=+ .+ +|. ..-+...+-.+.+.+.+.||..
T Consensus 279 G~dhVgiGsDfdG~~~~p~-----gl~d~~~~p~l~~~L~~~G~se 319 (369)
T 1itu_A 279 GARAVGFGGDFDGVPRVPE-----GLEDVSKYPDLIAELLRRNWTE 319 (369)
T ss_dssp CGGGEEECCCTTSCSCCCB-----TCSSTTCHHHHHHHHHHTTCCH
T ss_pred CCCeEEECCCCCCCCCCCC-----CCCCHHHHHHHHHHHHHcCCCH
Confidence 89999986322 11 221 1113345566666666667653
No 261
>1qap_A Quinolinic acid phosphoribosyltransferase; glycosyltransferase, NAD biosynthesis; HET: NTM; 2.80A {Salmonella typhimurium} SCOP: c.1.17.1 d.41.2.1
Probab=55.15 E-value=36 Score=30.61 Aligned_cols=63 Identities=16% Similarity=0.257 Sum_probs=42.2
Q ss_pred HHHHHHHhCCCcEEEEeccCCCCCCCCcHHHHHHHHHHHHHhCCCcEEEEeecCCCCCHHHHHHHHHcCCCeeecch
Q 018731 138 NTAKAIASWGVDYIVLTSVDRDDIPDGGSGHFARTVKAMKKQKPDIMVECLTSDFRGDLRAVETLVHSGLDVFAHNI 214 (351)
Q Consensus 138 ~~~~~~~~~G~~~I~ltgg~~~~l~~~~~~~~~~li~~ik~~~p~i~i~~~~~~~~~~~e~l~~L~~aG~~~i~~~i 214 (351)
+++++..+.|+..|.+.. +. .+.+.+.++.+. +.+.+++ .+++ +++.+..++++|+|.|.++-
T Consensus 219 ee~~eA~~aGaD~I~ld~-----~~---~e~l~~~v~~~~---~~~~I~A--SGGI-t~~~i~~~a~~GvD~isvGs 281 (296)
T 1qap_A 219 DELDDALKAGADIIMLDN-----FN---TDQMREAVKRVN---GQARLEV--SGNV-TAETLREFAETGVDFISVGA 281 (296)
T ss_dssp HHHHHHHHTTCSEEEESS-----CC---HHHHHHHHHTTC---TTCCEEE--CCCS-CHHHHHHHHHTTCSEEECSH
T ss_pred HHHHHHHHcCCCEEEECC-----CC---HHHHHHHHHHhC---CCCeEEE--ECCC-CHHHHHHHHHcCCCEEEEeH
Confidence 445555677888888732 22 356666554332 3456665 4554 99999999999999998763
No 262
>3l5l_A Xenobiotic reductase A; TIM barrel, oxidoreductase; HET: BU3 FMN; 1.03A {Pseudomonas putida} SCOP: c.1.4.0 PDB: 3l5m_A* 3n19_B* 3n16_A* 3l68_A* 3l67_A* 3l65_A* 3l66_A* 3n14_A* 2h8z_A* 2h90_A* 2h8x_A*
Probab=55.12 E-value=24 Score=32.69 Aligned_cols=87 Identities=13% Similarity=0.166 Sum_probs=49.1
Q ss_pred HHHHHHHHcCCCeeecchhc---hHHHH-hhh--c-C-CCCCHHHH----HHHHHHHHHhC-CCCeEEEeeeee-C---C
Q 018731 197 RAVETLVHSGLDVFAHNIET---VKRLQ-RIV--R-D-PRAGYEQS----LEVLKHAKLSK-KGLITKSSIMLG-L---G 259 (351)
Q Consensus 197 e~l~~L~~aG~~~i~~~ies---~~~~~-~~~--r-~-~~~~~~~~----l~~i~~~~~~~-~Gi~v~~~~IvG-l---g 259 (351)
+.+++.+++|+|.|-++.-- ++++. ... | | -+.+.+.+ ++.++.+++.. .++.|..-+=.. + |
T Consensus 162 ~aA~~a~~aGfDgVEih~a~GyLl~qFlsp~~N~R~D~yGGslenR~r~~~eiv~aVr~avg~d~pV~vRis~~~~~~~G 241 (363)
T 3l5l_A 162 DAARRARDAGFEWIELHFAHGYLGQSFFSEHSNKRTDAYGGSFDNRSRFLLETLAAVREVWPENLPLTARFGVLEYDGRD 241 (363)
T ss_dssp HHHHHHHHHTCSEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHTTSCTTSCEEEEEEEECSSSCH
T ss_pred HHHHHHHHcCCCEEEEccccchHHHHccCCCcCCCCcccCcCHHHHHHHHHHHHHHHHHHcCCCceEEEEecchhcCCCC
Confidence 44667788999999764311 12221 110 1 1 13355543 55666666532 233332222111 1 3
Q ss_pred -CCHHHHHHHHHHHHhCCCCEEeee
Q 018731 260 -ESDDDLKEAMADLRSIDVDILTLG 283 (351)
Q Consensus 260 -Et~e~~~~~l~~l~~lg~d~i~i~ 283 (351)
.+.++..+.++.+.+.|+|.+.+.
T Consensus 242 ~~~~~~~~~la~~L~~~Gvd~i~vs 266 (363)
T 3l5l_A 242 EQTLEESIELARRFKAGGLDLLSVS 266 (363)
T ss_dssp HHHHHHHHHHHHHHHHTTCCEEEEE
T ss_pred CCCHHHHHHHHHHHHHcCCCEEEEe
Confidence 567888899999999999999885
No 263
>1qo2_A Molecule: N-((5-phosphoribosyl)-formimino)-5-aminoimidazol- 4-carboxamid ribonucleotid...; isomerase, histidine biosynthesis; 1.85A {Thermotoga maritima} SCOP: c.1.2.1 PDB: 2cff_A 2w79_A
Probab=55.05 E-value=2.8 Score=36.39 Aligned_cols=74 Identities=11% Similarity=0.091 Sum_probs=48.5
Q ss_pred chhHHHHHHHHHhCCCcEEEEeccCCC-CCCCCcHHHHHHHHHHHHHhCCCcEEEEeecCCCCCHHHHHHHHHcCCCeee
Q 018731 133 PMEPENTAKAIASWGVDYIVLTSVDRD-DIPDGGSGHFARTVKAMKKQKPDIMVECLTSDFRGDLRAVETLVHSGLDVFA 211 (351)
Q Consensus 133 ~eei~~~~~~~~~~G~~~I~ltgg~~~-~l~~~~~~~~~~li~~ik~~~p~i~i~~~~~~~~~~~e~l~~L~~aG~~~i~ 211 (351)
..++.+.++.+.+.|++.+.++.-+.+ ... ....++++.++ .. ++.+-+ .++..+.+.++.+.++|++.+.
T Consensus 29 ~~~~~~~a~~~~~~Gad~i~v~d~~~~~~~~----~~~~~~i~~i~-~~-~ipvi~--~Ggi~~~~~~~~~~~~Gad~V~ 100 (241)
T 1qo2_A 29 EKDPVELVEKLIEEGFTLIHVVDLSNAIENS----GENLPVLEKLS-EF-AEHIQI--GGGIRSLDYAEKLRKLGYRRQI 100 (241)
T ss_dssp SSCHHHHHHHHHHTTCCCEEEEEHHHHHHCC----CTTHHHHHHGG-GG-GGGEEE--ESSCCSHHHHHHHHHTTCCEEE
T ss_pred CcCHHHHHHHHHHcCCCEEEEecccccccCC----chhHHHHHHHH-hc-CCcEEE--ECCCCCHHHHHHHHHCCCCEEE
Confidence 356777888888999999988752210 001 01245566665 32 444433 4566688999999999999997
Q ss_pred cch
Q 018731 212 HNI 214 (351)
Q Consensus 212 ~~i 214 (351)
++-
T Consensus 101 lg~ 103 (241)
T 1qo2_A 101 VSS 103 (241)
T ss_dssp ECH
T ss_pred ECc
Confidence 763
No 264
>2ztj_A Homocitrate synthase; (beta/alpha)8 TIM barrel, substrate complex, amino-acid BIOS lysine biosynthesis, transferase; HET: AKG; 1.80A {Thermus thermophilus} PDB: 2ztk_A* 2zyf_A* 3a9i_A*
Probab=54.96 E-value=54 Score=30.50 Aligned_cols=79 Identities=14% Similarity=0.177 Sum_probs=51.0
Q ss_pred CCchhHHHHHHHHHhCCCcEEEEeccCCCCCCCCcHHHHHHHHHHHHHhC-CCcEEEEe-ecCCCCCHHHHHHHHHcCCC
Q 018731 131 PDPMEPENTAKAIASWGVDYIVLTSVDRDDIPDGGSGHFARTVKAMKKQK-PDIMVECL-TSDFRGDLRAVETLVHSGLD 208 (351)
Q Consensus 131 ~~~eei~~~~~~~~~~G~~~I~ltgg~~~~l~~~~~~~~~~li~~ik~~~-p~i~i~~~-~~~~~~~~e~l~~L~~aG~~ 208 (351)
.+++.+.+.++.+.+. +..|.|..-..-.. ...+.++++.+++.. +++.+.+- .++.-+--...-.-.++|++
T Consensus 142 ~~~~~~~~~~~~~~~~-a~~i~l~DT~G~~~----P~~~~~lv~~l~~~~~~~~~i~~H~Hnd~GlAvAN~laAv~aGa~ 216 (382)
T 2ztj_A 142 SEEQDLLAVYEAVAPY-VDRVGLADTVGVAT----PRQVYALVREVRRVVGPRVDIEFHGHNDTGCAIANAYEAIEAGAT 216 (382)
T ss_dssp SCHHHHHHHHHHHGGG-CSEEEEEETTSCCC----HHHHHHHHHHHHHHHTTTSEEEEEEBCTTSCHHHHHHHHHHTTCC
T ss_pred CCHHHHHHHHHHHHHh-cCEEEecCCCCCCC----HHHHHHHHHHHHHhcCCCCeEEEEeCCCccHHHHHHHHHHHhCCC
Confidence 4577888889888888 99998843222112 378889999998863 56555532 33332233334445678999
Q ss_pred eeecch
Q 018731 209 VFAHNI 214 (351)
Q Consensus 209 ~i~~~i 214 (351)
.|...+
T Consensus 217 ~vd~tv 222 (382)
T 2ztj_A 217 HVDTTI 222 (382)
T ss_dssp EEEEBG
T ss_pred EEEEcc
Confidence 986543
No 265
>2yxb_A Coenzyme B12-dependent mutase; alpha/beta, structural genomics, NPPSFA, national project on structural and functional analyses; 1.80A {Aeropyrum pernix}
Probab=54.91 E-value=81 Score=25.28 Aligned_cols=66 Identities=18% Similarity=0.108 Sum_probs=43.0
Q ss_pred HHHHHHhCCCcEEEEeccCCCCCCCCcHHHHHHHHHHHHHhCC-CcEEEEeecCCCCCHHHHHHHHHcCCCeeec
Q 018731 139 TAKAIASWGVDYIVLTSVDRDDIPDGGSGHFARTVKAMKKQKP-DIMVECLTSDFRGDLRAVETLVHSGLDVFAH 212 (351)
Q Consensus 139 ~~~~~~~~G~~~I~ltgg~~~~l~~~~~~~~~~li~~ik~~~p-~i~i~~~~~~~~~~~e~l~~L~~aG~~~i~~ 212 (351)
.++.+.+.+.+-|.+++-... ..+.+.++++.+++..+ ++.|-+- + ....+..+.+++.|+|.+..
T Consensus 61 lv~aa~~~~~diV~lS~~~~~-----~~~~~~~~i~~L~~~g~~~i~v~vG--G-~~~~~~~~~l~~~G~d~v~~ 127 (161)
T 2yxb_A 61 VAMAAVQEDVDVIGVSILNGA-----HLHLMKRLMAKLRELGADDIPVVLG--G-TIPIPDLEPLRSLGIREIFL 127 (161)
T ss_dssp HHHHHHHTTCSEEEEEESSSC-----HHHHHHHHHHHHHHTTCTTSCEEEE--E-CCCHHHHHHHHHTTCCEEEC
T ss_pred HHHHHHhcCCCEEEEEeechh-----hHHHHHHHHHHHHhcCCCCCEEEEe--C-CCchhcHHHHHHCCCcEEEC
Confidence 445556778888888765432 14678889999988753 4554332 2 22445567788999997653
No 266
>3vnd_A TSA, tryptophan synthase alpha chain; psychrophilic enzyme, cold adaptation; HET: PE8; 2.60A {Shewanella frigidimarina}
Probab=54.89 E-value=1.1e+02 Score=26.87 Aligned_cols=81 Identities=20% Similarity=0.213 Sum_probs=51.4
Q ss_pred CchhHHHHHHHHHhCCCcEEEEeccCCCCCCCCc---------------HHHHHHHHHHHHHhCCCcEEEEee---cCCC
Q 018731 132 DPMEPENTAKAIASWGVDYIVLTSVDRDDIPDGG---------------SGHFARTVKAMKKQKPDIMVECLT---SDFR 193 (351)
Q Consensus 132 ~~eei~~~~~~~~~~G~~~I~ltgg~~~~l~~~~---------------~~~~~~li~~ik~~~p~i~i~~~~---~~~~ 193 (351)
+.+...+.++.+.+.|++-|-|.---.+.+.|+. .+.+.++++.+++..+++.+..++ |-+.
T Consensus 30 ~~~~~~~~~~~l~~~GaD~iElgiPfSDP~aDGp~Iq~a~~~AL~~G~~~~~~~~~v~~ir~~~~~~Pivlm~Y~npv~~ 109 (267)
T 3vnd_A 30 SPELSLKIIQTLVDNGADALELGFPFSDPLADGPVIQGANLRSLAAGTTSSDCFDIITKVRAQHPDMPIGLLLYANLVFA 109 (267)
T ss_dssp CHHHHHHHHHHHHHTTCSSEEEECCCSCCTTCCHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCTTCCEEEEECHHHHHH
T ss_pred CHHHHHHHHHHHHHcCCCEEEECCCCCCCCCCCHHHHHHHHHHHHcCCCHHHHHHHHHHHHhcCCCCCEEEEecCcHHHH
Confidence 4566778888888999998777411111133321 235678888888764455555433 1110
Q ss_pred -CCHHHHHHHHHcCCCeeec
Q 018731 194 -GDLRAVETLVHSGLDVFAH 212 (351)
Q Consensus 194 -~~~e~l~~L~~aG~~~i~~ 212 (351)
..+..++.++++|+|.+.+
T Consensus 110 ~g~e~f~~~~~~aGvdgvii 129 (267)
T 3vnd_A 110 NGIDEFYTKAQAAGVDSVLI 129 (267)
T ss_dssp HCHHHHHHHHHHHTCCEEEE
T ss_pred hhHHHHHHHHHHcCCCEEEe
Confidence 1367899999999999765
No 267
>1tqx_A D-ribulose-5-phosphate 3-epimerase, putative; structural genomics, protein structure initiative, PSI; 2.00A {Plasmodium falciparum} SCOP: c.1.2.2
Probab=54.72 E-value=1e+02 Score=26.37 Aligned_cols=129 Identities=15% Similarity=0.250 Sum_probs=72.5
Q ss_pred CCchhHHHHHHHHHhCCCcEEEE--eccC-CCCCCCCcHHHHHHHHHHHHHhCCCcE--EEEeecCCCCCHHHHHHHHHc
Q 018731 131 PDPMEPENTAKAIASWGVDYIVL--TSVD-RDDIPDGGSGHFARTVKAMKKQKPDIM--VECLTSDFRGDLRAVETLVHS 205 (351)
Q Consensus 131 ~~~eei~~~~~~~~~~G~~~I~l--tgg~-~~~l~~~~~~~~~~li~~ik~~~p~i~--i~~~~~~~~~~~e~l~~L~~a 205 (351)
.+...+.+.++.+.+.|++.+.+ -.|. .+.+. .+ ..+++.+++..|+.. ++..+.+ ....++.+.+
T Consensus 15 ~D~~~l~~~i~~~~~~g~d~iHvDvmDg~fvpn~t-~G----~~~v~~lr~~~p~~~~dvhLmv~d---p~~~i~~~~~- 85 (227)
T 1tqx_A 15 SNISKLAEETQRMESLGAEWIHLDVMDMHFVPNLS-FG----PPVINNLKKYTKSIFFDVHLMVEY---PEKYVPLLKT- 85 (227)
T ss_dssp SCGGGHHHHHHHHHHTTCSEEEEEEEBSSSSSCBC-CC----HHHHHHHGGGCSSCEEEEEEESSC---GGGGGGGCTT-
T ss_pred CChhhHHHHHHHHHHcCCCEEEEEEEeCCcCcchh-cC----HHHHHHHHHhCCCCcEEEEEEEcC---HHHHHHHHHh-
Confidence 34456777888888889887544 2333 22332 11 367888888876644 3444432 1235555655
Q ss_pred CCCeeecchhchHHHHhhhcCCCCCHHHHHHHHHHHHHhCCCCeEEEeeeeeCCCCHHHHHHHHHHHHhCC-CCEEeeec
Q 018731 206 GLDVFAHNIETVKRLQRIVRDPRAGYEQSLEVLKHAKLSKKGLITKSSIMLGLGESDDDLKEAMADLRSID-VDILTLGQ 284 (351)
Q Consensus 206 G~~~i~~~ies~~~~~~~~r~~~~~~~~~l~~i~~~~~~~~Gi~v~~~~IvGlgEt~e~~~~~l~~l~~lg-~d~i~i~~ 284 (351)
.|.+.+..|+.+. +..+.++..+.+++ .|+++...+ . ..|.. +.++.+.++| +|.+-++
T Consensus 86 -Ad~itvH~ea~~~----------~~~~~i~~~~~i~~--~G~k~gval--n-p~tp~---~~~~~~l~~g~~D~Vlvm- 145 (227)
T 1tqx_A 86 -SNQLTFHFEALNE----------DTERCIQLAKEIRD--NNLWCGISI--K-PKTDV---QKLVPILDTNLINTVLVM- 145 (227)
T ss_dssp -SSEEEEEGGGGTT----------CHHHHHHHHHHHHT--TTCEEEEEE--C-TTSCG---GGGHHHHTTTCCSEEEEE-
T ss_pred -CCEEEEeecCCcc----------CHHHHHHHHHHHHH--cCCeEEEEe--C-CCCcH---HHHHHHhhcCCcCEEEEe-
Confidence 7888877776321 23333342227788 898754443 2 23332 2334445665 9998775
Q ss_pred ccCC
Q 018731 285 YLQP 288 (351)
Q Consensus 285 ~l~P 288 (351)
-..|
T Consensus 146 sV~p 149 (227)
T 1tqx_A 146 TVEP 149 (227)
T ss_dssp SSCT
T ss_pred eecc
Confidence 3356
No 268
>1mdl_A Mandelate racemase; isomerase, mandelate pathway, magnesium; HET: RMN SMN; 1.85A {Pseudomonas aeruginosa} SCOP: c.1.11.2 d.54.1.1 PDB: 1mdr_A* 3uxk_A* 3uxl_A* 1dtn_A* 1mra_A* 2mnr_A 1mns_A
Probab=54.38 E-value=1.3e+02 Score=27.37 Aligned_cols=148 Identities=11% Similarity=0.048 Sum_probs=82.3
Q ss_pred CchhHHHHHHHHHhCCCcEEEEeccCCCCCCCCcHHHHHHHHHHHHHhC-CCcEEEEeecCCCCCH----HHHHHHHHcC
Q 018731 132 DPMEPENTAKAIASWGVDYIVLTSVDRDDIPDGGSGHFARTVKAMKKQK-PDIMVECLTSDFRGDL----RAVETLVHSG 206 (351)
Q Consensus 132 ~~eei~~~~~~~~~~G~~~I~ltgg~~~~l~~~~~~~~~~li~~ik~~~-p~i~i~~~~~~~~~~~----e~l~~L~~aG 206 (351)
++++..+.++.+.+.|++.+-+-.|.+ ..+.-.+.++++++.. +++.+.+=.+... +. +.++.|.++|
T Consensus 144 ~~~~~~~~a~~~~~~Gf~~iKik~g~~------~~~~~~e~v~avr~a~g~~~~l~vDan~~~-~~~~a~~~~~~l~~~~ 216 (359)
T 1mdl_A 144 GVKLATERAVTAAELGFRAVKTRIGYP------ALDQDLAVVRSIRQAVGDDFGIMVDYNQSL-DVPAAIKRSQALQQEG 216 (359)
T ss_dssp HHHHHHHHHHHHHHTTCSEEEEECCCS------SHHHHHHHHHHHHHHHCSSSEEEEECTTCS-CHHHHHHHHHHHHHHT
T ss_pred CHHHHHHHHHHHHHcCCCEEEEecCCC------CHHHHHHHHHHHHHHhCCCCEEEEECCCCC-CHHHHHHHHHHHHHhC
Confidence 457777778888889999988865542 1356678899998864 5666544334332 43 4566677778
Q ss_pred CCeeecchhchHHHHhhhcCCCCCHHHHHHHHHHHHHhCCCCeEEEeeeeeCCCCHHHHHHHHHHHHhCCCCEEeeeccc
Q 018731 207 LDVFAHNIETVKRLQRIVRDPRAGYEQSLEVLKHAKLSKKGLITKSSIMLGLGESDDDLKEAMADLRSIDVDILTLGQYL 286 (351)
Q Consensus 207 ~~~i~~~ies~~~~~~~~r~~~~~~~~~l~~i~~~~~~~~Gi~v~~~~IvGlgEt~e~~~~~l~~l~~lg~d~i~i~~~l 286 (351)
++.| |. + + +..++ +.++.+++. .++.+.+ +|+..+..+..+.+.+-.+|.+.+.
T Consensus 217 i~~i----E~--P----~--~~~~~----~~~~~l~~~-~~iPI~~------de~~~~~~~~~~~i~~~~~d~v~ik--- 270 (359)
T 1mdl_A 217 VTWI----EE--P----T--LQHDY----EGHQRIQSK-LNVPVQM------GENWLGPEEMFKALSIGACRLAMPD--- 270 (359)
T ss_dssp CSCE----EC--C----S--CTTCH----HHHHHHHHT-CSSCEEE------CTTCCSHHHHHHHHHTTCCSEECCB---
T ss_pred CCeE----EC--C----C--ChhhH----HHHHHHHHh-CCCCEEe------CCCCCCHHHHHHHHHcCCCCEEeec---
Confidence 8866 21 1 1 12233 334444441 3444322 3433333333444556667877662
Q ss_pred CCCCCcccccCCCCHHHHHHHHHHHHhcCcceec
Q 018731 287 QPTPLHLTVKEYVTPEKFDFWKAYGESIGFRYVA 320 (351)
Q Consensus 287 ~PTp~~~~~~~~v~~~e~~~~~~~~~~~G~~~~~ 320 (351)
++... ...+..++.++++..|...+.
T Consensus 271 -~~~~G-------Gi~~~~~i~~~A~~~g~~~~~ 296 (359)
T 1mdl_A 271 -AMKIG-------GVTGWIRASALAQQFGIPMSS 296 (359)
T ss_dssp -TTTTT-------HHHHHHHHHHHHHHTTCCBCC
T ss_pred -chhhC-------CHHHHHHHHHHHHHcCCeEee
Confidence 22211 234566677777777776443
No 269
>1xky_A Dihydrodipicolinate synthase; TIM barrel, , lysine biosynthesis;spine, lyase; 1.94A {Bacillus anthracis} SCOP: c.1.10.1 PDB: 1xl9_A 3hij_A*
Probab=54.13 E-value=16 Score=33.00 Aligned_cols=79 Identities=11% Similarity=0.049 Sum_probs=49.6
Q ss_pred CCCchhHHHHHHHHHhCCCcEEEEecc--CCCCCCCCcHHHHHHHHHHHHHhCC-CcEEEEeecCCCCCH---HHHHHHH
Q 018731 130 PPDPMEPENTAKAIASWGVDYIVLTSV--DRDDIPDGGSGHFARTVKAMKKQKP-DIMVECLTSDFRGDL---RAVETLV 203 (351)
Q Consensus 130 ~~~~eei~~~~~~~~~~G~~~I~ltgg--~~~~l~~~~~~~~~~li~~ik~~~p-~i~i~~~~~~~~~~~---e~l~~L~ 203 (351)
..+.+...+.++.+.+.|++.+++.|. +...|. .+.-.++++.+.+... .+.|-+-+. ...+. +..+...
T Consensus 29 ~iD~~~l~~lv~~li~~Gv~gl~v~GtTGE~~~Ls---~eEr~~v~~~~~~~~~grvpViaGvg-~~~t~~ai~la~~A~ 104 (301)
T 1xky_A 29 NIDFAKTTKLVNYLIDNGTTAIVVGGTTGESPTLT---SEEKVALYRHVVSVVDKRVPVIAGTG-SNNTHASIDLTKKAT 104 (301)
T ss_dssp SBCHHHHHHHHHHHHHTTCCEEEESSTTTTGGGSC---HHHHHHHHHHHHHHHTTSSCEEEECC-CSCHHHHHHHHHHHH
T ss_pred CcCHHHHHHHHHHHHHcCCCEEEECccccChhhCC---HHHHHHHHHHHHHHhCCCceEEeCCC-CCCHHHHHHHHHHHH
Confidence 356777889999999999999998664 444454 3556666666655422 344433222 11234 4556677
Q ss_pred HcCCCeeec
Q 018731 204 HSGLDVFAH 212 (351)
Q Consensus 204 ~aG~~~i~~ 212 (351)
++|.|.+.+
T Consensus 105 ~~Gadavlv 113 (301)
T 1xky_A 105 EVGVDAVML 113 (301)
T ss_dssp HTTCSEEEE
T ss_pred hcCCCEEEE
Confidence 789998854
No 270
>3daq_A DHDPS, dihydrodipicolinate synthase; lysine biosynthesis, amino-ACI biosynthesis, diaminopimelate biosynthesis, lyase, schiff B; 1.45A {Staphylococcus aureus} SCOP: c.1.10.0 PDB: 3di1_A 3di0_A
Probab=53.88 E-value=15 Score=33.00 Aligned_cols=79 Identities=9% Similarity=0.005 Sum_probs=49.5
Q ss_pred CCCchhHHHHHHHHHhCCCcEEEEec--cCCCCCCCCcHHHHHHHHHHHHHhC-CCcEEEEeecCCCCCH---HHHHHHH
Q 018731 130 PPDPMEPENTAKAIASWGVDYIVLTS--VDRDDIPDGGSGHFARTVKAMKKQK-PDIMVECLTSDFRGDL---RAVETLV 203 (351)
Q Consensus 130 ~~~~eei~~~~~~~~~~G~~~I~ltg--g~~~~l~~~~~~~~~~li~~ik~~~-p~i~i~~~~~~~~~~~---e~l~~L~ 203 (351)
..+.+...+.++.+.+.|++.+++.| |+...|. .+.-.++++.+.+.. ..+.|-+-+. ...+. +..+...
T Consensus 19 ~iD~~~l~~lv~~li~~Gv~gl~v~GttGE~~~Lt---~~Er~~v~~~~~~~~~grvpviaGvg-~~~t~~ai~la~~a~ 94 (292)
T 3daq_A 19 KVNLEALKAHVNFLLENNAQAIIVNGTTAESPTLT---TDEKELILKTVIDLVDKRVPVIAGTG-TNDTEKSIQASIQAK 94 (292)
T ss_dssp EECHHHHHHHHHHHHHTTCCEEEESSGGGTGGGSC---HHHHHHHHHHHHHHHTTSSCEEEECC-CSCHHHHHHHHHHHH
T ss_pred CcCHHHHHHHHHHHHHcCCCEEEECccccccccCC---HHHHHHHHHHHHHHhCCCCcEEEeCC-cccHHHHHHHHHHHH
Confidence 45667788899999999999998865 4544455 355566666665542 2344433221 11233 5566677
Q ss_pred HcCCCeeec
Q 018731 204 HSGLDVFAH 212 (351)
Q Consensus 204 ~aG~~~i~~ 212 (351)
++|.|.+.+
T Consensus 95 ~~Gadavlv 103 (292)
T 3daq_A 95 ALGADAIML 103 (292)
T ss_dssp HHTCSEEEE
T ss_pred HcCCCEEEE
Confidence 789998864
No 271
>1q7z_A 5-methyltetrahydrofolate S-homocysteine methyltransferase; methionine, cobalamin, vitamin B12; 1.70A {Thermotoga maritima} SCOP: c.1.21.2 c.1.26.1 PDB: 1q7q_A 1q7m_A 1q85_A 1q8a_A 1q8j_A* 3bof_A 3bol_A
Probab=53.85 E-value=1.7e+02 Score=28.72 Aligned_cols=136 Identities=9% Similarity=0.068 Sum_probs=80.8
Q ss_pred CchhHHHHHHHHHhCCCcEEEEeccCCCCCCCCcHHHHHHHHHHHHHhCCCcEEEEeecCCCCCHHHHHHHHHc--CCCe
Q 018731 132 DPMEPENTAKAIASWGVDYIVLTSVDRDDIPDGGSGHFARTVKAMKKQKPDIMVECLTSDFRGDLRAVETLVHS--GLDV 209 (351)
Q Consensus 132 ~~eei~~~~~~~~~~G~~~I~ltgg~~~~l~~~~~~~~~~li~~ik~~~p~i~i~~~~~~~~~~~e~l~~L~~a--G~~~ 209 (351)
+.+++.+.+++..+.|.+-|-+.-|.+. .. ..+.+.+++..|++.. ++.+.+=| .+.+.++.-.++ |.+.
T Consensus 338 ~~~~a~~~A~~~v~~GAdiIDIgpg~~~-v~--~~ee~~rvv~~i~~~~-~vpisIDT----~~~~v~eaal~~~~G~~i 409 (566)
T 1q7z_A 338 NEEIVIKEAKTQVEKGAEVLDVNFGIES-QI--DVRYVEKIVQTLPYVS-NVPLSLDI----QNVDLTERALRAYPGRSL 409 (566)
T ss_dssp CCHHHHHHHHHHHHTTCSEEEEECSSGG-GS--CHHHHHHHHHHHHHHT-CSCEEEEC----CCHHHHHHHHHHCSSCCE
T ss_pred CHHHHHHHHHHHHHCCCCEEEECCCCCC-CC--HHHHHHHHHHHHHhhC-CceEEEeC----CCHHHHHHHHHhcCCCCE
Confidence 5678888898889999998888633321 22 2477888888887653 55554322 277888888888 8887
Q ss_pred ee-cchhc--hHHHHhhh------------cC-CCCCHHHH----HHHHHHHHHhCCCCe--EEEeeee---eCCCCHHH
Q 018731 210 FA-HNIET--VKRLQRIV------------RD-PRAGYEQS----LEVLKHAKLSKKGLI--TKSSIML---GLGESDDD 264 (351)
Q Consensus 210 i~-~~ies--~~~~~~~~------------r~-~~~~~~~~----l~~i~~~~~~~~Gi~--v~~~~Iv---GlgEt~e~ 264 (351)
|+ ++.+. ++++.+.. ++ ...++++. .+.++.+.+ .|+. +-.|-.+ |+|...-+
T Consensus 410 INdis~~~~~~~~~~~~~~~~g~~vV~m~~~~~~p~t~~~~~~~l~~~~~~a~~--~Gi~~~IilDPg~~~igfgk~~~~ 487 (566)
T 1q7z_A 410 FNSAKVDEEELEMKINLLKKYGGTLIVLLMGKDVPKSFEERKEYFEKALKILER--HDFSDRVIFDPGVLPLGAEGKPVE 487 (566)
T ss_dssp EEEEESCHHHHHHHHHHHHHHCCEEEEESCSSSCCCSHHHHHHHHHHHHHHHHH--TTCGGGEEEECCCCCTTTTCCHHH
T ss_pred EEECCcchhhHHHHHHHHHHhCCeEEEEeCCCCCcCCHHHHHHHHHHHHHHHHH--CCCCCcEEEeCCCCcccCcHHHHH
Confidence 75 23222 12221110 01 11234443 344555666 8884 5555555 77554455
Q ss_pred HHHHHHHHHhCCC
Q 018731 265 LKEAMADLRSIDV 277 (351)
Q Consensus 265 ~~~~l~~l~~lg~ 277 (351)
+.+.++.++++|.
T Consensus 488 ~l~~~~~~~~~g~ 500 (566)
T 1q7z_A 488 VLKTIEFISSKGF 500 (566)
T ss_dssp HHHHHHHHHHTTC
T ss_pred HHHHHHHHHhCCC
Confidence 5666677777754
No 272
>1jub_A Dihydroorotate dehydrogenase A; homodimer, alpha-beta barrel, flavoprotein, mutant enzyme, oxidoreductase; HET: FMN; 1.40A {Lactococcus lactis} SCOP: c.1.4.1 PDB: 1ovd_A* 1jue_A* 1dor_A* 2bsl_A* 2bx7_A* 2dor_A* 1jqv_A* 1jrb_A* 1jrc_A* 1jqx_A*
Probab=53.64 E-value=37 Score=30.37 Aligned_cols=80 Identities=14% Similarity=0.102 Sum_probs=50.7
Q ss_pred CchhHHHHHHHHHhCCCcEEEEeccC-----CC------CCCC----C---c---HHHHHHHHHHHHHhCC-CcEEEEee
Q 018731 132 DPMEPENTAKAIASWGVDYIVLTSVD-----RD------DIPD----G---G---SGHFARTVKAMKKQKP-DIMVECLT 189 (351)
Q Consensus 132 ~~eei~~~~~~~~~~G~~~I~ltgg~-----~~------~l~~----~---~---~~~~~~li~~ik~~~p-~i~i~~~~ 189 (351)
+.+++.+.++.+.+.|++.|.+++.. .+ .+.. + + .....+.++.+++..+ ++.|-.
T Consensus 170 ~~~~~~~~a~~~~~~G~d~i~v~~~~~~g~~i~~~~~~~~~~~~~~~gG~sg~~~~~~~~~~i~~v~~~~~~~ipvi~-- 247 (311)
T 1jub_A 170 DLVHFDIMAEILNQFPLTYVNSVNSIGNGLFIDPEAESVVIKPKDGFGGIGGAYIKPTALANVRAFYTRLKPEIQIIG-- 247 (311)
T ss_dssp SHHHHHHHHHHHTTSCCCEEEECCCEEEEECEETTTTEESCSGGGGEEEEESGGGHHHHHHHHHHHHTTSCTTSEEEE--
T ss_pred CHHHHHHHHHHHHHcCCcEEEecCCCCcCceeccCCCCcccccCCCCCccccccccHHHHHHHHHHHHhcCCCCCEEE--
Confidence 34566777888888999998886531 00 0000 0 1 2234678888887653 566543
Q ss_pred cCCCCCHHHHHHHHHcCCCeeecc
Q 018731 190 SDFRGDLRAVETLVHSGLDVFAHN 213 (351)
Q Consensus 190 ~~~~~~~e~l~~L~~aG~~~i~~~ 213 (351)
.++..+.+.+..+..+|.|.|.++
T Consensus 248 ~GGI~~~~da~~~l~~GAd~V~vg 271 (311)
T 1jub_A 248 TGGIETGQDAFEHLLCGATMLQIG 271 (311)
T ss_dssp ESSCCSHHHHHHHHHHTCSEEEEC
T ss_pred ECCCCCHHHHHHHHHcCCCEEEEc
Confidence 456668777777668999999876
No 273
>3qze_A DHDPS, dihydrodipicolinate synthase; alpha beta barrel, cytoplasmic; 1.59A {Pseudomonas aeruginosa} PDB: 3puo_A* 3noe_A 3ps7_A* 3s8h_A
Probab=53.52 E-value=13 Score=33.73 Aligned_cols=79 Identities=14% Similarity=0.021 Sum_probs=50.0
Q ss_pred CCCchhHHHHHHHHHhCCCcEEEEec--cCCCCCCCCcHHHHHHHHHHHHHhCC-CcEEEEeecCCCCCH---HHHHHHH
Q 018731 130 PPDPMEPENTAKAIASWGVDYIVLTS--VDRDDIPDGGSGHFARTVKAMKKQKP-DIMVECLTSDFRGDL---RAVETLV 203 (351)
Q Consensus 130 ~~~~eei~~~~~~~~~~G~~~I~ltg--g~~~~l~~~~~~~~~~li~~ik~~~p-~i~i~~~~~~~~~~~---e~l~~L~ 203 (351)
..+.+...+.++.+.+.|++.+++.| |+...|. .+.-.++++.+.+... .+.|-+-+. ...+. +..+...
T Consensus 40 ~iD~~~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls---~~Er~~v~~~~v~~~~grvpViaGvg-~~st~eai~la~~A~ 115 (314)
T 3qze_A 40 RLDWDSLAKLVDFHLQEGTNAIVAVGTTGESATLD---VEEHIQVIRRVVDQVKGRIPVIAGTG-ANSTREAVALTEAAK 115 (314)
T ss_dssp CBCHHHHHHHHHHHHHHTCCEEEESSGGGTGGGCC---HHHHHHHHHHHHHHHTTSSCEEEECC-CSSHHHHHHHHHHHH
T ss_pred CcCHHHHHHHHHHHHHcCCCEEEECccccChhhCC---HHHHHHHHHHHHHHhCCCCcEEEeCC-CcCHHHHHHHHHHHH
Confidence 45677888999999999999998865 5544455 3555666666655422 344433221 11133 5566677
Q ss_pred HcCCCeeec
Q 018731 204 HSGLDVFAH 212 (351)
Q Consensus 204 ~aG~~~i~~ 212 (351)
++|.|.+.+
T Consensus 116 ~~Gadavlv 124 (314)
T 3qze_A 116 SGGADACLL 124 (314)
T ss_dssp HTTCSEEEE
T ss_pred HcCCCEEEE
Confidence 889999854
No 274
>3si9_A DHDPS, dihydrodipicolinate synthase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, TIM barrel; 2.10A {Bartonella henselae}
Probab=53.19 E-value=14 Score=33.57 Aligned_cols=79 Identities=10% Similarity=0.025 Sum_probs=50.0
Q ss_pred CCCchhHHHHHHHHHhCCCcEEEEec--cCCCCCCCCcHHHHHHHHHHHHHhCC-CcEEEEeecCCCCCH---HHHHHHH
Q 018731 130 PPDPMEPENTAKAIASWGVDYIVLTS--VDRDDIPDGGSGHFARTVKAMKKQKP-DIMVECLTSDFRGDL---RAVETLV 203 (351)
Q Consensus 130 ~~~~eei~~~~~~~~~~G~~~I~ltg--g~~~~l~~~~~~~~~~li~~ik~~~p-~i~i~~~~~~~~~~~---e~l~~L~ 203 (351)
..+.+...+.++.+.+.|++.+++.| |+...|. .+.-.++++.+.+... .+.|-+-+. ...+. +..+...
T Consensus 39 ~iD~~~l~~li~~li~~Gv~Gl~v~GtTGE~~~Ls---~~Er~~v~~~~v~~~~grvpViaGvg-~~st~~ai~la~~A~ 114 (315)
T 3si9_A 39 AIDEKAFCNFVEWQITQGINGVSPVGTTGESPTLT---HEEHKRIIELCVEQVAKRVPVVAGAG-SNSTSEAVELAKHAE 114 (315)
T ss_dssp CBCHHHHHHHHHHHHHTTCSEEECSSTTTTGGGSC---HHHHHHHHHHHHHHHTTSSCBEEECC-CSSHHHHHHHHHHHH
T ss_pred CcCHHHHHHHHHHHHHcCCCEEEeCccccCccccC---HHHHHHHHHHHHHHhCCCCcEEEeCC-CCCHHHHHHHHHHHH
Confidence 46677888999999999999998866 4444454 3556666666655422 233322221 11133 5566777
Q ss_pred HcCCCeeec
Q 018731 204 HSGLDVFAH 212 (351)
Q Consensus 204 ~aG~~~i~~ 212 (351)
++|.|.+.+
T Consensus 115 ~~Gadavlv 123 (315)
T 3si9_A 115 KAGADAVLV 123 (315)
T ss_dssp HTTCSEEEE
T ss_pred hcCCCEEEE
Confidence 889999854
No 275
>3oa3_A Aldolase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, pathogenic fungus; 1.60A {Coccidioides immitis}
Probab=53.19 E-value=1.1e+02 Score=27.45 Aligned_cols=77 Identities=13% Similarity=0.112 Sum_probs=48.3
Q ss_pred CCchhHHHHHHHHHhCCCcEEEEeccCCCCCCCCcHHHHHHHHHHHHHh-CCCcEEEEeecCCCCCHHHHHHHHHcCCCe
Q 018731 131 PDPMEPENTAKAIASWGVDYIVLTSVDRDDIPDGGSGHFARTVKAMKKQ-KPDIMVECLTSDFRGDLRAVETLVHSGLDV 209 (351)
Q Consensus 131 ~~~eei~~~~~~~~~~G~~~I~ltgg~~~~l~~~~~~~~~~li~~ik~~-~p~i~i~~~~~~~~~~~e~l~~L~~aG~~~ 209 (351)
++.+++...++...+.|++.|--+.|-.. ..-..+.+ ++++.+.+. .+.+.|.+ .++..+.+.+..|.++|.++
T Consensus 185 Lt~eei~~A~~ia~eaGADfVKTSTGf~~--~GAT~edv-~lmr~~v~~~g~~v~VKA--AGGIrt~edAl~mi~aGA~R 259 (288)
T 3oa3_A 185 LTADEIIAGCVLSSLAGADYVKTSTGFNG--PGASIENV-SLMSAVCDSLQSETRVKA--SGGIRTIEDCVKMVRAGAER 259 (288)
T ss_dssp CCHHHHHHHHHHHHHTTCSEEECCCSSSS--CCCCHHHH-HHHHHHHHHSSSCCEEEE--ESSCCSHHHHHHHHHTTCSE
T ss_pred CCHHHHHHHHHHHHHcCCCEEEcCCCCCC--CCCCHHHH-HHHHHHHHHhCCCceEEE--eCCCCCHHHHHHHHHcCCce
Confidence 45677777777778899998865433211 11113443 455555432 34577766 45566888888899999998
Q ss_pred eec
Q 018731 210 FAH 212 (351)
Q Consensus 210 i~~ 212 (351)
|-.
T Consensus 260 iGt 262 (288)
T 3oa3_A 260 LGA 262 (288)
T ss_dssp EEE
T ss_pred eeh
Confidence 743
No 276
>3a5f_A Dihydrodipicolinate synthase; TIM barrel, enzyme, amino-acid biosynthesis, cytoplasm, diaminopimelate biosynthesis, lyase; HET: KPI; 1.19A {Clostridium botulinum A} PDB: 3bi8_A* 3ird_A*
Probab=53.01 E-value=16 Score=32.64 Aligned_cols=78 Identities=13% Similarity=-0.017 Sum_probs=49.3
Q ss_pred CCchhHHHHHHHHHhCCCcEEEEec--cCCCCCCCCcHHHHHHHHHHHHHhCC-CcEEEEeecCCCCCH---HHHHHHHH
Q 018731 131 PDPMEPENTAKAIASWGVDYIVLTS--VDRDDIPDGGSGHFARTVKAMKKQKP-DIMVECLTSDFRGDL---RAVETLVH 204 (351)
Q Consensus 131 ~~~eei~~~~~~~~~~G~~~I~ltg--g~~~~l~~~~~~~~~~li~~ik~~~p-~i~i~~~~~~~~~~~---e~l~~L~~ 204 (351)
.+.+...+.++.+.+.|++.+++.| |+...|. .+.-.++++.+.+... .+.|-+-+. ...+. +..+...+
T Consensus 19 iD~~~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls---~~Er~~v~~~~~~~~~gr~pvi~Gvg-~~~t~~ai~la~~a~~ 94 (291)
T 3a5f_A 19 VDFDKLSELIEWHIKSKTDAIIVCGTTGEATTMT---ETERKETIKFVIDKVNKRIPVIAGTG-SNNTAASIAMSKWAES 94 (291)
T ss_dssp BCHHHHHHHHHHHHHTTCCEEEESSGGGTGGGSC---HHHHHHHHHHHHHHHTTSSCEEEECC-CSSHHHHHHHHHHHHH
T ss_pred cCHHHHHHHHHHHHHcCCCEEEECccccChhhCC---HHHHHHHHHHHHHHhCCCCcEEEeCC-cccHHHHHHHHHHHHh
Confidence 6677788999999999999998865 4544455 3555666666655422 244433222 11233 45566677
Q ss_pred cCCCeeec
Q 018731 205 SGLDVFAH 212 (351)
Q Consensus 205 aG~~~i~~ 212 (351)
+|.|.+.+
T Consensus 95 ~Gadavlv 102 (291)
T 3a5f_A 95 IGVDGLLV 102 (291)
T ss_dssp TTCSEEEE
T ss_pred cCCCEEEE
Confidence 89999754
No 277
>3nvt_A 3-deoxy-D-arabino-heptulosonate 7-phosphate synth; bifunctional 3-deoxy-7-phosphoheptulonate synthase/chorismat listeria monocytogenes EGD-E; 1.95A {Listeria monocytogenes} PDB: 3tfc_A*
Probab=52.88 E-value=1.5e+02 Score=27.66 Aligned_cols=125 Identities=14% Similarity=0.091 Sum_probs=71.7
Q ss_pred CchhHHHHHHHHHhCCCcEEEEeccCCCC----CCCCcHHHHHHHHHHHHHhCCCcEEEEeecCCCCCHHHHHHHHHcCC
Q 018731 132 DPMEPENTAKAIASWGVDYIVLTSVDRDD----IPDGGSGHFARTVKAMKKQKPDIMVECLTSDFRGDLRAVETLVHSGL 207 (351)
Q Consensus 132 ~~eei~~~~~~~~~~G~~~I~ltgg~~~~----l~~~~~~~~~~li~~ik~~~p~i~i~~~~~~~~~~~e~l~~L~~aG~ 207 (351)
+.+...+.++.+++.|++.|.+..-.+.. +...+.+.+..+.+..++. |+.+-+ ++ .+.+.++.+.+. +
T Consensus 154 s~e~a~~~a~~~k~aGa~~vk~q~fkprts~~~f~gl~~egl~~L~~~~~~~--Gl~~~t-e~---~d~~~~~~l~~~-v 226 (385)
T 3nvt_A 154 SYEQVAAVAESIKAKGLKLIRGGAFKPRTSPYDFQGLGLEGLKILKRVSDEY--GLGVIS-EI---VTPADIEVALDY-V 226 (385)
T ss_dssp CHHHHHHHHHHHHHTTCCEEECBSSCCCSSTTSCCCCTHHHHHHHHHHHHHH--TCEEEE-EC---CSGGGHHHHTTT-C
T ss_pred CHHHHHHHHHHHHHcCCCeEEcccccCCCChHhhcCCCHHHHHHHHHHHHHc--CCEEEE-ec---CCHHHHHHHHhh-C
Confidence 56778899999999999988876543211 1112345554444444444 565533 22 377888888888 9
Q ss_pred CeeecchhchHHHHhhhcCCCCCHHHHHHHHHHHHHhCCCCeEEEeeeeeCCCCHHHHHHHHHHHHhCCCCEEee
Q 018731 208 DVFAHNIETVKRLQRIVRDPRAGYEQSLEVLKHAKLSKKGLITKSSIMLGLGESDDDLKEAMADLRSIDVDILTL 282 (351)
Q Consensus 208 ~~i~~~ies~~~~~~~~r~~~~~~~~~l~~i~~~~~~~~Gi~v~~~~IvGlgEt~e~~~~~l~~l~~lg~d~i~i 282 (351)
+.+.++--.. .++ ..++.+.+ .|..| .+=-|..-|.+|+...++.+.+.|-+.+.+
T Consensus 227 d~lkIgs~~~-----------~n~----~LL~~~a~--~gkPV--ilk~G~~~t~~e~~~Ave~i~~~Gn~~i~L 282 (385)
T 3nvt_A 227 DVIQIGARNM-----------QNF----ELLKAAGR--VDKPI--LLKRGLSATIEEFIGAAEYIMSQGNGKIIL 282 (385)
T ss_dssp SEEEECGGGT-----------TCH----HHHHHHHT--SSSCE--EEECCTTCCHHHHHHHHHHHHTTTCCCEEE
T ss_pred CEEEECcccc-----------cCH----HHHHHHHc--cCCcE--EEecCCCCCHHHHHHHHHHHHHcCCCeEEE
Confidence 9888763221 111 23333433 44432 112333457777777777777776543333
No 278
>3hgj_A Chromate reductase; TIM barrel, oxidoreductase; HET: FMN; 2.00A {Thermus scotoductus} SCOP: c.1.4.0 PDB: 3hf3_A*
Probab=52.81 E-value=89 Score=28.52 Aligned_cols=87 Identities=17% Similarity=0.215 Sum_probs=49.9
Q ss_pred HHHHHHHHcCCCeeecchhc---hHHHH-hhh--c-C-CCCCHHH----HHHHHHHHHHhC-CCCeEEEeeee----eCC
Q 018731 197 RAVETLVHSGLDVFAHNIET---VKRLQ-RIV--R-D-PRAGYEQ----SLEVLKHAKLSK-KGLITKSSIML----GLG 259 (351)
Q Consensus 197 e~l~~L~~aG~~~i~~~ies---~~~~~-~~~--r-~-~~~~~~~----~l~~i~~~~~~~-~Gi~v~~~~Iv----Glg 259 (351)
+.++..+++|+|.|-++.-. ++++. ... | | -+.+.+. .++.++.+++.. +++.|..-+=. .-|
T Consensus 156 ~aA~~a~~aGfDgVEih~a~GyLl~qFlsp~~N~R~D~yGGslenR~r~~~eiv~aVR~avG~d~pV~vRls~~~~~~~g 235 (349)
T 3hgj_A 156 EGARRALRAGFQVIELHMAHGYLLSSFLSPLSNQRTDAYGGSLENRMRFPLQVAQAVREVVPRELPLFVRVSATDWGEGG 235 (349)
T ss_dssp HHHHHHHHTTCCEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHSCTTSCEEEEEESCCCSTTS
T ss_pred HHHHHHHHcCCCEEEECCccchHHHHhcCCcccccCCCCCcCHHHHHHHHHHHHHHHHHHhcCCceEEEEeccccccCCC
Confidence 45667788999998764322 23321 111 1 0 1234543 345555555532 23333222111 115
Q ss_pred CCHHHHHHHHHHHHhCCCCEEeee
Q 018731 260 ESDDDLKEAMADLRSIDVDILTLG 283 (351)
Q Consensus 260 Et~e~~~~~l~~l~~lg~d~i~i~ 283 (351)
.+.++..+.++.+.+.|+|.+.+.
T Consensus 236 ~~~~~~~~la~~L~~~Gvd~i~vs 259 (349)
T 3hgj_A 236 WSLEDTLAFARRLKELGVDLLDCS 259 (349)
T ss_dssp CCHHHHHHHHHHHHHTTCCEEEEE
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEe
Confidence 688999999999999999999985
No 279
>2dh2_A 4F2 cell-surface antigen heavy chain; TIM-barrel, glycosidase like, antiparallel beta-sheet, greek terminal domain, extracellular domain; 2.10A {Homo sapiens} PDB: 2dh3_A
Probab=52.63 E-value=24 Score=33.29 Aligned_cols=52 Identities=21% Similarity=0.204 Sum_probs=41.6
Q ss_pred CCHHHHHHHHHHHHHhCCCCeEEEeeeeeC-CCC----------HHHHHHHHHHHHhCCCCEEee
Q 018731 229 AGYEQSLEVLKHAKLSKKGLITKSSIMLGL-GES----------DDDLKEAMADLRSIDVDILTL 282 (351)
Q Consensus 229 ~~~~~~l~~i~~~~~~~~Gi~v~~~~IvGl-gEt----------~e~~~~~l~~l~~lg~d~i~i 282 (351)
.+.++..+.++.+++ .||+|-.++++.+ ++. .+.+.+.+++-.+.|+|-+.+
T Consensus 79 Gt~~d~~~lv~~ah~--~Gi~vilD~V~NH~s~~~wF~~q~~~Vr~~~~~~~~~Wl~~gvDGfRl 141 (424)
T 2dh2_A 79 GSKEDFDSLLQSAKK--KSIRVILDLTPNYRGENSWFSTQVDTVATKVKDALEFWLQAGVDGFQV 141 (424)
T ss_dssp CCHHHHHHHHHHHHH--TTCEEEEECCTTTTSSSTTCSSCHHHHHHHHHHHHHHHHHHTCCEEEE
T ss_pred CCHHHHHHHHHHHHH--CCCEEEEEECCCcCCCcccccccCHHHHHHHHHHHHHHHHcCCCEEEE
Confidence 478999999999999 9999999999987 532 345667776656689997776
No 280
>3m5v_A DHDPS, dihydrodipicolinate synthase; TIM barrel, csgid, amino-acid biosynthesis, diaminopimelate biosynthesis, lyase, lysine biosynthesis; HET: MSE; 1.80A {Campylobacter jejuni} SCOP: c.1.10.0 PDB: 3ler_A*
Probab=52.57 E-value=40 Score=30.23 Aligned_cols=78 Identities=10% Similarity=0.025 Sum_probs=50.3
Q ss_pred CCchhHHHHHHHHHhCCCcEEEEec--cCCCCCCCCcHHHHHHHHHHHHHhCC--CcEEEEeecCCCCCH---HHHHHHH
Q 018731 131 PDPMEPENTAKAIASWGVDYIVLTS--VDRDDIPDGGSGHFARTVKAMKKQKP--DIMVECLTSDFRGDL---RAVETLV 203 (351)
Q Consensus 131 ~~~eei~~~~~~~~~~G~~~I~ltg--g~~~~l~~~~~~~~~~li~~ik~~~p--~i~i~~~~~~~~~~~---e~l~~L~ 203 (351)
.+.+...+.++.+.+.|++.+++.| |+...|. .+.-.++++.+.+... .+.|-+-+. ...+. +..+...
T Consensus 25 iD~~~l~~lv~~li~~Gv~gl~v~GttGE~~~Ls---~~Er~~v~~~~~~~~~g~rvpviaGvg-~~~t~~ai~la~~a~ 100 (301)
T 3m5v_A 25 VDEQSYARLIKRQIENGIDAVVPVGTTGESATLT---HEEHRTCIEIAVETCKGTKVKVLAGAG-SNATHEAVGLAKFAK 100 (301)
T ss_dssp ECHHHHHHHHHHHHHTTCCEEECSSTTTTGGGSC---HHHHHHHHHHHHHHHTTSSCEEEEECC-CSSHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHcCCCEEEECccccChhhCC---HHHHHHHHHHHHHHhCCCCCeEEEeCC-CCCHHHHHHHHHHHH
Confidence 5667788899999999999998866 4434444 4566677777665432 355543222 11233 5566677
Q ss_pred HcCCCeeec
Q 018731 204 HSGLDVFAH 212 (351)
Q Consensus 204 ~aG~~~i~~ 212 (351)
++|.|.+.+
T Consensus 101 ~~Gadavlv 109 (301)
T 3m5v_A 101 EHGADGILS 109 (301)
T ss_dssp HTTCSEEEE
T ss_pred HcCCCEEEE
Confidence 889999854
No 281
>1h7n_A 5-aminolaevulinic acid dehydratase; lyase, aldolase, TIM barrel, tetrapyrrole synthesis; HET: SHF; 1.6A {Saccharomyces cerevisiae} SCOP: c.1.10.3 PDB: 1h7p_A* 1h7r_A* 1ohl_A* 1qml_A 1qnv_A 1w31_A* 1h7o_A* 1eb3_A* 1gjp_A* 1ylv_A* 1aw5_A
Probab=52.51 E-value=35 Score=31.14 Aligned_cols=60 Identities=15% Similarity=0.198 Sum_probs=42.4
Q ss_pred CCCCCCCchhHHHHHHHHHhCCCcEEEEeccCCCC-CCC-------CcHHHHHHHHHHHHHhCCCcEE
Q 018731 126 RNPAPPDPMEPENTAKAIASWGVDYIVLTSVDRDD-IPD-------GGSGHFARTVKAMKKQKPDIMV 185 (351)
Q Consensus 126 ~~~~~~~~eei~~~~~~~~~~G~~~I~ltgg~~~~-l~~-------~~~~~~~~li~~ik~~~p~i~i 185 (351)
.+..+.+.+.+.++++.+.+.|++.|.|-|.-+.. ..+ ..-.-+.+.++.||+.+|++.|
T Consensus 61 PGv~r~sid~l~~~~~~~~~lGi~~v~LFgv~~~~~~KD~~gs~A~~~~g~v~rair~iK~~~pdl~V 128 (342)
T 1h7n_A 61 PNINRIGVNRLKDYLKPLVAKGLRSVILFGVPLIPGTKDPVGTAADDPAGPVIQGIKFIREYFPELYI 128 (342)
T ss_dssp TTCEEECHHHHHHHHHHHHHTTCCEEEEEEECCSTTCCBTTCGGGGCTTSHHHHHHHHHHHHCTTSEE
T ss_pred CCceeeCHHHHHHHHHHHHHCCCCEEEEecccCccCCCCccccccCCCCChHHHHHHHHHHHCCCeEE
Confidence 34445667889999999999999999887763220 111 0012577899999999999754
No 282
>1vhn_A Putative flavin oxidoreducatase; structural genomics, unknown function; HET: FMN; 1.59A {Thermotoga maritima} SCOP: c.1.4.1
Probab=52.48 E-value=12 Score=33.98 Aligned_cols=72 Identities=17% Similarity=0.141 Sum_probs=44.2
Q ss_pred hHHHHHHHHHhCCCcEEEEeccCCCCCCCCcHHHHHHHHHHHHHhCCCcEEEEeecCCCCCHHHHHHHHH-cCCCeeecc
Q 018731 135 EPENTAKAIASWGVDYIVLTSVDRDDIPDGGSGHFARTVKAMKKQKPDIMVECLTSDFRGDLRAVETLVH-SGLDVFAHN 213 (351)
Q Consensus 135 ei~~~~~~~~~~G~~~I~ltgg~~~~l~~~~~~~~~~li~~ik~~~p~i~i~~~~~~~~~~~e~l~~L~~-aG~~~i~~~ 213 (351)
+..+.++.+.+.|+..|.+.|+.......+ ...+ ++++.+++ ++.|- .+++..+.+.+..+.+ .|+|.|.++
T Consensus 141 ~~~~~a~~l~~~G~d~i~v~g~~~~~~~~~-~~~~-~~i~~i~~---~ipVi--~~GgI~s~~da~~~l~~~gad~V~iG 213 (318)
T 1vhn_A 141 EVEEIYRILVEEGVDEVFIHTRTVVQSFTG-RAEW-KALSVLEK---RIPTF--VSGDIFTPEDAKRALEESGCDGLLVA 213 (318)
T ss_dssp CHHHHHHHHHHTTCCEEEEESSCTTTTTSS-CCCG-GGGGGSCC---SSCEE--EESSCCSHHHHHHHHHHHCCSEEEES
T ss_pred HHHHHHHHHHHhCCCEEEEcCCCccccCCC-CcCH-HHHHHHHc---CCeEE--EECCcCCHHHHHHHHHcCCCCEEEEC
Confidence 334777888889999999988764222111 0112 45555554 44443 3455557666666555 799999886
No 283
>3ozy_A Putative mandelate racemase; beta-alpha barrel, enolase superfamily member, M-xylarate, U function; HET: DXL; 1.30A {Bordetella bronchiseptica} PDB: 3ozm_A* 3h12_A 3op2_A*
Probab=52.40 E-value=1.5e+02 Score=27.48 Aligned_cols=147 Identities=13% Similarity=0.056 Sum_probs=86.2
Q ss_pred CCchhHHHHHHHHHhCCCcEEEEeccCCCCCCCCcHHHHHHHHHHHHHhC-CCcEEEEeecCCCCCH----HHHHHHHHc
Q 018731 131 PDPMEPENTAKAIASWGVDYIVLTSVDRDDIPDGGSGHFARTVKAMKKQK-PDIMVECLTSDFRGDL----RAVETLVHS 205 (351)
Q Consensus 131 ~~~eei~~~~~~~~~~G~~~I~ltgg~~~~l~~~~~~~~~~li~~ik~~~-p~i~i~~~~~~~~~~~----e~l~~L~~a 205 (351)
.+++++.+.++.+.+.|++.+-+--|. +.+.-.+.++++++.. |++.+.+=.+.. .+. +.++.|.+.
T Consensus 150 ~~~e~~~~~a~~~~~~G~~~iKiKvG~-------~~~~d~~~v~avR~a~g~d~~l~vDan~~-~~~~~A~~~~~~l~~~ 221 (389)
T 3ozy_A 150 LTPDQAADELAGWVEQGFTAAKLKVGR-------APRKDAANLRAMRQRVGADVEILVDANQS-LGRHDALAMLRILDEA 221 (389)
T ss_dssp CCHHHHHHHHHHHHHTTCSEEEEECCS-------CHHHHHHHHHHHHHHHCTTSEEEEECTTC-CCHHHHHHHHHHHHHT
T ss_pred CCHHHHHHHHHHHHHCCCCEEeeccCC-------CHHHHHHHHHHHHHHcCCCceEEEECCCC-cCHHHHHHHHHHHHhc
Confidence 357888888888889999998874332 1356778889998864 566654423433 243 356777888
Q ss_pred CCCeeecchhchHHHHhhhcCCCCCHHHHHHHHHHHH-HhCCCCeEEEeeeeeCCCCHHHHHHHHHHHHhCCCCEEeeec
Q 018731 206 GLDVFAHNIETVKRLQRIVRDPRAGYEQSLEVLKHAK-LSKKGLITKSSIMLGLGESDDDLKEAMADLRSIDVDILTLGQ 284 (351)
Q Consensus 206 G~~~i~~~ies~~~~~~~~r~~~~~~~~~l~~i~~~~-~~~~Gi~v~~~~IvGlgEt~e~~~~~l~~l~~lg~d~i~i~~ 284 (351)
|++.|- - ++ +..++ +.++.++ +. .++. +-.+|+..+..+..+.+..-.+|.+.+.
T Consensus 222 ~i~~iE----q--P~------~~~d~----~~~~~l~~~~-~~iP------Ia~dE~i~~~~~~~~~i~~~~~d~v~ik- 277 (389)
T 3ozy_A 222 GCYWFE----E--PL------SIDDI----EGHRILRAQG-TPVR------IATGENLYTRNAFNDYIRNDAIDVLQAD- 277 (389)
T ss_dssp TCSEEE----S--CS------CTTCH----HHHHHHHTTC-CSSE------EEECTTCCHHHHHHHHHHTTCCSEECCC-
T ss_pred CCCEEE----C--CC------CcccH----HHHHHHHhcC-CCCC------EEeCCCCCCHHHHHHHHHcCCCCEEEeC-
Confidence 888772 1 11 12233 3344454 31 3333 3235665565555556666678877662
Q ss_pred ccCCCCCcccccCCCCHHHHHHHHHHHHhcCccee
Q 018731 285 YLQPTPLHLTVKEYVTPEKFDFWKAYGESIGFRYV 319 (351)
Q Consensus 285 ~l~PTp~~~~~~~~v~~~e~~~~~~~~~~~G~~~~ 319 (351)
++... ...+..++.++++..|...+
T Consensus 278 ---~~~~G-------Git~~~~ia~~A~~~gi~~~ 302 (389)
T 3ozy_A 278 ---ASRAG-------GITEALAISASAASAHLAWN 302 (389)
T ss_dssp ---TTTSS-------CHHHHHHHHHHHHHTTCEEC
T ss_pred ---ccccC-------CHHHHHHHHHHHHHcCCEEE
Confidence 22211 23456667777777776544
No 284
>2i9e_A Triosephosphate isomerase; 2.00A {Tenebrio molitor}
Probab=52.39 E-value=1.2e+02 Score=26.58 Aligned_cols=56 Identities=20% Similarity=0.170 Sum_probs=39.7
Q ss_pred HHHHHHHcCCCeeecchhchHHHHhhhcCCCCCHHHHHHHHHHHHHhCCCCeEEEeeeeeCCCCHHHH
Q 018731 198 AVETLVHSGLDVFAHNIETVKRLQRIVRDPRAGYEQSLEVLKHAKLSKKGLITKSSIMLGLGESDDDL 265 (351)
Q Consensus 198 ~l~~L~~aG~~~i~~~ies~~~~~~~~r~~~~~~~~~l~~i~~~~~~~~Gi~v~~~~IvGlgEt~e~~ 265 (351)
-...|+++|++.+-+|- ..+|.+- +.+-+.+-+.++.+.+ .|+. .|+..|||.++.
T Consensus 78 S~~mL~d~G~~~ViiGH----SERR~~f--~Etd~~v~~Kv~~Al~--~GL~----pIvCvGEtleer 133 (259)
T 2i9e_A 78 SPAMIKDVGADWVILGH----SERRQIF--GESDELIAEKVCHALE--SGLK----VIACIGETLEER 133 (259)
T ss_dssp CHHHHHHTTCCEEEESC----HHHHHTS--CCCHHHHHHHHHHHHH--TTCE----EEEEECCCHHHH
T ss_pred CHHHHHHcCCCEEEECc----hhhhhhc--CCCHHHHHHHHHHHHH--CCCe----EEEEcCCcHHHH
Confidence 35678899999987762 2233332 5677778888888888 8986 356669998854
No 285
>3c2e_A Nicotinate-nucleotide pyrophosphorylase; qprtase, prtase, BNA6, mechanism, cytoplasm, glycosyltransferase, nucleus; 1.90A {Saccharomyces cerevisiae} PDB: 3c2f_A* 3c2o_A* 3c2v_A* 3c2r_A*
Probab=51.98 E-value=8.1 Score=34.90 Aligned_cols=64 Identities=20% Similarity=0.390 Sum_probs=27.1
Q ss_pred HHHHHhCCCcEEEEeccCCCCCCCCcHHHHHHHHHHHHHh---CCCcEEEEeecCCCCCHHHHHHHHHcCCCeeecch
Q 018731 140 AKAIASWGVDYIVLTSVDRDDIPDGGSGHFARTVKAMKKQ---KPDIMVECLTSDFRGDLRAVETLVHSGLDVFAHNI 214 (351)
Q Consensus 140 ~~~~~~~G~~~I~ltgg~~~~l~~~~~~~~~~li~~ik~~---~p~i~i~~~~~~~~~~~e~l~~L~~aG~~~i~~~i 214 (351)
+.+..+.|+..|.+.... .+.+.++++.++.. +|++.+++ .+++ +++.+..+.++|+|.|.++-
T Consensus 212 ~~~A~~aGaD~I~ld~~~--------~~~l~~~v~~l~~~~~g~~~v~I~A--SGGI-t~~ni~~~~~~GvD~i~vGs 278 (294)
T 3c2e_A 212 ATEAIEAGADVIMLDNFK--------GDGLKMCAQSLKNKWNGKKHFLLEC--SGGL-NLDNLEEYLCDDIDIYSTSS 278 (294)
T ss_dssp HHHHHHHTCSEEECCC-----------------------------CCEEEE--ECCC-CC------CCCSCSEEECGG
T ss_pred HHHHHHcCCCEEEECCCC--------HHHHHHHHHHhcccccCCCCeEEEE--ECCC-CHHHHHHHHHcCCCEEEEec
Confidence 333345688887763222 24566666666543 24567765 3454 88999999999999998763
No 286
>1tv5_A Dhodehase, dihydroorotate dehydrogenase homolog, mitochondri, dihydroorotate; alpha-beta barrel, TIM barrel, oxidoreductase; HET: A26 FMN ORO N8E; 2.40A {Plasmodium falciparum} SCOP: c.1.4.1
Probab=51.90 E-value=36 Score=32.54 Aligned_cols=80 Identities=11% Similarity=0.062 Sum_probs=53.6
Q ss_pred CchhHHHHHHHHHhCCCcEEEEeccCCCCCC-------CC---c---HHHHHHHHHHHHHhCC-CcEEEEeecCCCCCHH
Q 018731 132 DPMEPENTAKAIASWGVDYIVLTSVDRDDIP-------DG---G---SGHFARTVKAMKKQKP-DIMVECLTSDFRGDLR 197 (351)
Q Consensus 132 ~~eei~~~~~~~~~~G~~~I~ltgg~~~~l~-------~~---~---~~~~~~li~~ik~~~p-~i~i~~~~~~~~~~~e 197 (351)
+.+++.+.++.+.+.|++.|.+++....... .+ + .+.-.++++.+++..+ ++.|- ..+++.+.+
T Consensus 309 ~~ed~~~iA~~~~~aGaDgI~v~ntt~~~~d~~~~~~~~GGlSG~~~~~~sl~~i~~v~~~v~~~iPVI--g~GGI~s~~ 386 (443)
T 1tv5_A 309 NQEQKKEIADVLLETNIDGMIISNTTTQINDIKSFENKKGGVSGAKLKDISTKFICEMYNYTNKQIPII--ASGGIFSGL 386 (443)
T ss_dssp CHHHHHHHHHHHHHTTCSEEEECCCBSCCCCCGGGTTCCSEEEEHHHHHHHHHHHHHHHHHTTTCSCEE--EESSCCSHH
T ss_pred CHHHHHHHHHHHHHcCCCEEEEECCCcccccccccccccCCcCCCcchHHHHHHHHHHHHHcCCCCcEE--EECCCCCHH
Confidence 3357888899999999999999875431110 00 1 1234678888888753 45543 345666877
Q ss_pred HHHHHHHcCCCeeecc
Q 018731 198 AVETLVHSGLDVFAHN 213 (351)
Q Consensus 198 ~l~~L~~aG~~~i~~~ 213 (351)
.+.....+|.+.|.++
T Consensus 387 DA~e~l~aGAd~Vqig 402 (443)
T 1tv5_A 387 DALEKIEAGASVCQLY 402 (443)
T ss_dssp HHHHHHHTTEEEEEES
T ss_pred HHHHHHHcCCCEEEEc
Confidence 7777778999999775
No 287
>2yxg_A DHDPS, dihydrodipicolinate synthase; MJ0244, TIM beta/alpha-barrel fold, structural genomics, NPPSFA; 2.20A {Methanocaldococcus jannaschii DSM2661}
Probab=51.74 E-value=23 Score=31.68 Aligned_cols=78 Identities=12% Similarity=0.013 Sum_probs=49.4
Q ss_pred CCchhHHHHHHHHHhCCCcEEEEec--cCCCCCCCCcHHHHHHHHHHHHHhCC-CcEEEEeecCCCCCH---HHHHHHHH
Q 018731 131 PDPMEPENTAKAIASWGVDYIVLTS--VDRDDIPDGGSGHFARTVKAMKKQKP-DIMVECLTSDFRGDL---RAVETLVH 204 (351)
Q Consensus 131 ~~~eei~~~~~~~~~~G~~~I~ltg--g~~~~l~~~~~~~~~~li~~ik~~~p-~i~i~~~~~~~~~~~---e~l~~L~~ 204 (351)
.+.+...+.++.+.+.|++.+++.| |+...|. .+.-.++++.+.+... .+.|-+-+. ...+. +..+...+
T Consensus 18 iD~~~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls---~~Er~~v~~~~~~~~~gr~pviaGvg-~~~t~~ai~la~~a~~ 93 (289)
T 2yxg_A 18 VDFDGLEENINFLIENGVSGIVAVGTTGESPTLS---HEEHKKVIEKVVDVVNGRVQVIAGAG-SNCTEEAIELSVFAED 93 (289)
T ss_dssp ECHHHHHHHHHHHHHTTCSEEEESSTTTTGGGSC---HHHHHHHHHHHHHHHTTSSEEEEECC-CSSHHHHHHHHHHHHH
T ss_pred cCHHHHHHHHHHHHHCCCCEEEECccccChhhCC---HHHHHHHHHHHHHHhCCCCcEEEeCC-CCCHHHHHHHHHHHHh
Confidence 5667788899999999999998866 4444454 3556667776665432 355433222 11234 45566677
Q ss_pred cCCCeeec
Q 018731 205 SGLDVFAH 212 (351)
Q Consensus 205 aG~~~i~~ 212 (351)
+|.|.+.+
T Consensus 94 ~Gadavlv 101 (289)
T 2yxg_A 94 VGADAVLS 101 (289)
T ss_dssp HTCSEEEE
T ss_pred cCCCEEEE
Confidence 89998754
No 288
>1ny1_A Probable polysaccharide deacetylase PDAA; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium; 1.80A {Bacillus subtilis} SCOP: c.6.2.3 PDB: 1w17_A 1w1b_1 1w1a_1
Probab=51.64 E-value=31 Score=29.74 Aligned_cols=85 Identities=12% Similarity=0.127 Sum_probs=51.0
Q ss_pred cCCCCCHHHHHHHHHcCCCeeecchhchHHHHhhhcCCCCCHHHHHHHHHHHHHhCCCCeEEEeeeeeC---CCCHHHHH
Q 018731 190 SDFRGDLRAVETLVHSGLDVFAHNIETVKRLQRIVRDPRAGYEQSLEVLKHAKLSKKGLITKSSIMLGL---GESDDDLK 266 (351)
Q Consensus 190 ~~~~~~~e~l~~L~~aG~~~i~~~ies~~~~~~~~r~~~~~~~~~l~~i~~~~~~~~Gi~v~~~~IvGl---gEt~e~~~ 266 (351)
|.+..++..++.++++|...+..++++.+-... . ..+.+...+.+..-.+ +| .+|+-+ ..|.+.+.
T Consensus 142 P~G~~~~~~~~~l~~~G~~~v~w~~d~~Dw~~~--~--~~~~~~~~~~v~~~~~--~g-----~Iil~Hd~~~~t~~aL~ 210 (240)
T 1ny1_A 142 PRGVFSEYVLKETKRLGYQTVFWSVAFVDWKIN--N--QKGKKYAYDHMIKQAH--PG-----AIYLLHTVSRDNAEALD 210 (240)
T ss_dssp GGGEECHHHHHHHHHTTCEEBCCSBCCSCCCGG--G--CCCHHHHHHHHHHTCC--TT-----EEEEECSCSTTHHHHHH
T ss_pred CCCCCCHHHHHHHHHcCCEEEECcccccccCCc--C--CCCHHHHHHHHHhCCC--CC-----eEEEEcCCChhHHHHHH
Confidence 444457888888999998877666665432111 1 2245555544432212 44 233333 35778888
Q ss_pred HHHHHHHhCCCCEEeeecc
Q 018731 267 EAMADLRSIDVDILTLGQY 285 (351)
Q Consensus 267 ~~l~~l~~lg~d~i~i~~~ 285 (351)
..+..+++.|...+++...
T Consensus 211 ~ii~~l~~~Gy~fvtl~el 229 (240)
T 1ny1_A 211 DAITDLKKQGYTFKSIDDL 229 (240)
T ss_dssp HHHHHHHHHTCEEECHHHH
T ss_pred HHHHHHHHCCCEEEEhHHh
Confidence 8888888888887777533
No 289
>1ub3_A Aldolase protein; schiff base, deoxyribose phosphate, carbinolamine, structural genomics, riken structural genomics/proteomics initiative; HET: HPD; 1.40A {Thermus thermophilus} SCOP: c.1.10.1 PDB: 1j2w_A*
Probab=51.45 E-value=1.1e+02 Score=25.96 Aligned_cols=131 Identities=8% Similarity=0.030 Sum_probs=81.4
Q ss_pred CCchhHHHHHHHHHhCCCcEEEEeccCCCCCCCCcHHHHHHHHH-HHHHhCCCcEEEEee--cCCCCC-H---HHHHHHH
Q 018731 131 PDPMEPENTAKAIASWGVDYIVLTSVDRDDIPDGGSGHFARTVK-AMKKQKPDIMVECLT--SDFRGD-L---RAVETLV 203 (351)
Q Consensus 131 ~~~eei~~~~~~~~~~G~~~I~ltgg~~~~l~~~~~~~~~~li~-~ik~~~p~i~i~~~~--~~~~~~-~---e~l~~L~ 203 (351)
.+.+++.+.++++.+.|+..|++.- .+..... .++. .++.+.+.+ |.+..+ + ...+...
T Consensus 16 ~t~~~i~~l~~~a~~~~~~aVcv~p------------~~v~~~~~~l~~--~~v~v~~vigFP~G~~~~~~k~~e~~~Ai 81 (220)
T 1ub3_A 16 ATLEEVAKAAEEALEYGFYGLCIPP------------SYVAWVRARYPH--APFRLVTVVGFPLGYQEKEVKALEAALAC 81 (220)
T ss_dssp CCHHHHHHHHHHHHHHTCSEEECCG------------GGHHHHHHHCTT--CSSEEEEEESTTTCCSCHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHhCCCEEEECH------------HHHHHHHHHhCC--CCceEEEEecCCCCCCchHHHHHHHHHHH
Confidence 4568899999999999999998732 1222222 2222 246665433 222222 2 3456667
Q ss_pred HcCCCeeecchhchHHHHhhhcCCCCCHHHHHHHHHHHHHhCCCCeEEEeeeeeCCCCHHHHHHHHHHHHhCCCCEEeee
Q 018731 204 HSGLDVFAHNIETVKRLQRIVRDPRAGYEQSLEVLKHAKLSKKGLITKSSIMLGLGESDDDLKEAMADLRSIDVDILTLG 283 (351)
Q Consensus 204 ~aG~~~i~~~ies~~~~~~~~r~~~~~~~~~l~~i~~~~~~~~Gi~v~~~~IvGlgEt~e~~~~~l~~l~~lg~d~i~i~ 283 (351)
+.|.|.|.+-+.-. ..+ ..+++..++-+..+++...+..+..-+-.++ -|++++....+...++|+|+|-.+
T Consensus 82 ~~GAdevd~vinig-----~~~--~g~~~~v~~ei~~v~~a~~~~~lkvIlet~~-l~~e~i~~a~~ia~eaGADfVKTs 153 (220)
T 1ub3_A 82 ARGADEVDMVLHLG-----RAK--AGDLDYLEAEVRAVREAVPQAVLKVILETGY-FSPEEIARLAEAAIRGGADFLKTS 153 (220)
T ss_dssp HTTCSEEEEECCHH-----HHH--TTCHHHHHHHHHHHHHHSTTSEEEEECCGGG-SCHHHHHHHHHHHHHHTCSEEECC
T ss_pred HcCCCEEEecccch-----hhh--CCCHHHHHHHHHHHHHHHcCCCceEEEecCC-CCHHHHHHHHHHHHHhCCCEEEeC
Confidence 78999886533221 111 3577778888888777554443333333333 368889999999999999998774
No 290
>4g1k_A Triosephosphate isomerase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, TIM barrel, TPIA; 2.35A {Burkholderia thailandensis}
Probab=51.14 E-value=44 Score=29.66 Aligned_cols=57 Identities=16% Similarity=0.112 Sum_probs=40.3
Q ss_pred HHHHHHHcCCCeeecchhchHHHHhhhcCCCCCHHHHHHHHHHHHHhCCCCeEEEeeeeeCCCCHHHHH
Q 018731 198 AVETLVHSGLDVFAHNIETVKRLQRIVRDPRAGYEQSLEVLKHAKLSKKGLITKSSIMLGLGESDDDLK 266 (351)
Q Consensus 198 ~l~~L~~aG~~~i~~~ies~~~~~~~~r~~~~~~~~~l~~i~~~~~~~~Gi~v~~~~IvGlgEt~e~~~ 266 (351)
-...|++.|++.+-+|- ..+|.+- +.+-+.+-+.++.+.+ .|+. .|+-.|||.++..
T Consensus 104 Sa~MLkd~G~~~VIiGH----SERR~~f--gEtde~V~~K~~~Al~--~GL~----pIlCVGEtleeRe 160 (272)
T 4g1k_A 104 AAGMVAEFGAAYAIVGH----SERRAYH--GESNETVAAKARRALA--AGLT----PIVCVGETLAERE 160 (272)
T ss_dssp CHHHHHTTTCCEEEESC----HHHHHHS--CCCHHHHHHHHHHHHH--TTCE----EEEEECCCHHHHH
T ss_pred CHHHHHHcCCCEEEECc----hhccccc--CCCHHHHHHHHHHHHH--CCCe----EEEEeCCCHHHHh
Confidence 35678899999998762 2223332 5577777777888888 8986 3566699988774
No 291
>2jgq_A Triosephosphate isomerase; glycolysis, pentose shunt, gluconeogenesis, lipid synthesis, fatty acid biosynthesis; HET: QGA; 2.3A {Helicobacter pylori}
Probab=50.98 E-value=56 Score=28.30 Aligned_cols=101 Identities=16% Similarity=0.175 Sum_probs=59.1
Q ss_pred HHHHHHHcCCCeeecchhchHHHHhhhcCCCCCHHHHHHHHHHHHHhCCCCeEEEeeeeeCCCCHHHHHH----HHHHH-
Q 018731 198 AVETLVHSGLDVFAHNIETVKRLQRIVRDPRAGYEQSLEVLKHAKLSKKGLITKSSIMLGLGESDDDLKE----AMADL- 272 (351)
Q Consensus 198 ~l~~L~~aG~~~i~~~ies~~~~~~~~r~~~~~~~~~l~~i~~~~~~~~Gi~v~~~~IvGlgEt~e~~~~----~l~~l- 272 (351)
....|+++|++.+-+|- ..+|.+- +.+-+.+-+.++.+.+ .|+. .|+-.|||.++... +.+.+
T Consensus 73 S~~mL~d~G~~~ViiGH----SERR~~f--~Etd~~v~~Kv~~Al~--~GL~----pI~CvGEtleere~g~~~t~~vv~ 140 (233)
T 2jgq_A 73 TSKHLEELKIHTLLIGH----SERRTLL--KESPSFLKEKFDFFKS--KNFK----IVYCIGEELTTREKGFKAVKEFLS 140 (233)
T ss_dssp BHHHHHHTTCCEEEECC----HHHHHTT--CCCHHHHHHHHHHHHH--TTCE----EEEEECCCHHHHHHCHHHHHHHHH
T ss_pred CHHHHHHcCCCEEEeCc----hhhhccc--CCCHHHHHHHHHHHHH--CCCE----EEEEcCCcHHHHhcCchhHHHHHH
Confidence 35678899999987762 2233332 5677777788888888 8986 35556999887765 33333
Q ss_pred ---HhCCCC--EEeeecccCCCCCcccccCCCCHHHHHHHHHHHHh
Q 018731 273 ---RSIDVD--ILTLGQYLQPTPLHLTVKEYVTPEKFDFWKAYGES 313 (351)
Q Consensus 273 ---~~lg~d--~i~i~~~l~PTp~~~~~~~~v~~~e~~~~~~~~~~ 313 (351)
+.+..+ .+.+ .| .|. ..-.-....+|++..+..+..+.
T Consensus 141 ~Ql~~l~~~~~~~vI-AY-EPv-WAIGTG~~At~e~a~ev~~~IR~ 183 (233)
T 2jgq_A 141 EQLENIDLNYPNLVV-AY-EPI-WAIGTKKSASLEDIYLTHGFLKQ 183 (233)
T ss_dssp HHHTTSCTTCTTEEE-EE-CCG-GGTTC--CCCHHHHHHHHHHHHH
T ss_pred HHHHhhhhhccceEE-EE-eCH-HHhCCCCCCCHHHHHHHHHHHHH
Confidence 222222 2223 13 451 00001134578888887776665
No 292
>3qfe_A Putative dihydrodipicolinate synthase family PROT; seattle structural genomics center for infectious disease, S coccidioides, valley fever; 2.35A {Coccidioides immitis}
Probab=50.96 E-value=16 Score=33.34 Aligned_cols=79 Identities=13% Similarity=0.094 Sum_probs=50.2
Q ss_pred CCCchhHHHHHHHHHhCCCcEEEEec--cCCCCCCCCcHHHHHHHHHHHHHhC-CCcEEEEeecCCCCCH---HHHHHHH
Q 018731 130 PPDPMEPENTAKAIASWGVDYIVLTS--VDRDDIPDGGSGHFARTVKAMKKQK-PDIMVECLTSDFRGDL---RAVETLV 203 (351)
Q Consensus 130 ~~~~eei~~~~~~~~~~G~~~I~ltg--g~~~~l~~~~~~~~~~li~~ik~~~-p~i~i~~~~~~~~~~~---e~l~~L~ 203 (351)
..+.+...+.++.+.+.|++.+++.| |+...|. .+.-.++++.+.+.. ..+.|-+-+. ...+. +..+...
T Consensus 28 ~iD~~~l~~lv~~li~~Gv~gl~v~GtTGE~~~Ls---~~Er~~v~~~~~~~~~grvpviaGvg-~~~t~~ai~la~~a~ 103 (318)
T 3qfe_A 28 TLDLASQERYYAYLARSGLTGLVILGTNAEAFLLT---REERAQLIATARKAVGPDFPIMAGVG-AHSTRQVLEHINDAS 103 (318)
T ss_dssp EECHHHHHHHHHHHHTTTCSEEEESSGGGTGGGSC---HHHHHHHHHHHHHHHCTTSCEEEECC-CSSHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHcCCCEEEeCccccChhhCC---HHHHHHHHHHHHHHhCCCCcEEEeCC-CCCHHHHHHHHHHHH
Confidence 35667788899999999999999865 5544455 355666676666542 2344433221 11233 5566677
Q ss_pred HcCCCeeec
Q 018731 204 HSGLDVFAH 212 (351)
Q Consensus 204 ~aG~~~i~~ 212 (351)
++|.|.+.+
T Consensus 104 ~~Gadavlv 112 (318)
T 3qfe_A 104 VAGANYVLV 112 (318)
T ss_dssp HHTCSEEEE
T ss_pred HcCCCEEEE
Confidence 889998754
No 293
>3ovp_A Ribulose-phosphate 3-epimerase; iron binding, isomerase; HET: XPE; 1.70A {Homo sapiens} SCOP: c.1.2.0 PDB: 3ovq_A* 3ovr_A* 3qc3_A
Probab=50.83 E-value=80 Score=27.00 Aligned_cols=62 Identities=13% Similarity=0.208 Sum_probs=40.5
Q ss_pred CcEEEEeccCCCCCCCCc-HHHHHHHHHHHHHhCCCcEEEEeecCCCCCHHHHHHHHHcCCCeeecc
Q 018731 148 VDYIVLTSVDRDDIPDGG-SGHFARTVKAMKKQKPDIMVECLTSDFRGDLRAVETLVHSGLDVFAHN 213 (351)
Q Consensus 148 ~~~I~ltgg~~~~l~~~~-~~~~~~li~~ik~~~p~i~i~~~~~~~~~~~e~l~~L~~aG~~~i~~~ 213 (351)
++.|.+.+.+|. +.... .+...+-++.+++..+++.+++ .++. +++.+..++++|.|.+-.|
T Consensus 135 ~D~Vl~msv~pG-f~Gq~f~~~~l~ki~~lr~~~~~~~I~V--dGGI-~~~t~~~~~~aGAd~~VvG 197 (228)
T 3ovp_A 135 IDMALVMTVEPG-FGGQKFMEDMMPKVHWLRTQFPSLDIEV--DGGV-GPDTVHKCAEAGANMIVSG 197 (228)
T ss_dssp CSEEEEESSCTT-TCSCCCCGGGHHHHHHHHHHCTTCEEEE--ESSC-STTTHHHHHHHTCCEEEES
T ss_pred CCeEEEeeecCC-CCCcccCHHHHHHHHHHHHhcCCCCEEE--eCCc-CHHHHHHHHHcCCCEEEEe
Confidence 667777666542 22100 1234555777887766666654 4443 7899999999999998766
No 294
>3tak_A DHDPS, dihydrodipicolinate synthase; TIM barrel, lysine biosynthesis, pyruvate, lyase; 1.42A {Acinetobacter baumannii} PDB: 3pud_A* 3pue_A* 3pul_A 3rk8_A 3tce_A* 3tdf_A 3u8g_A 3uqn_A 4dxv_A
Probab=50.75 E-value=15 Score=33.00 Aligned_cols=79 Identities=13% Similarity=0.056 Sum_probs=49.6
Q ss_pred CCCchhHHHHHHHHHhCCCcEEEEecc--CCCCCCCCcHHHHHHHHHHHHHhC-CCcEEEEeecCCCCCH---HHHHHHH
Q 018731 130 PPDPMEPENTAKAIASWGVDYIVLTSV--DRDDIPDGGSGHFARTVKAMKKQK-PDIMVECLTSDFRGDL---RAVETLV 203 (351)
Q Consensus 130 ~~~~eei~~~~~~~~~~G~~~I~ltgg--~~~~l~~~~~~~~~~li~~ik~~~-p~i~i~~~~~~~~~~~---e~l~~L~ 203 (351)
..+.+...+.++.+.+.|++.+++.|. +...|. .+.-.++++.+.+.. ..+.|-+-+. ...+. +..+...
T Consensus 18 ~iD~~~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls---~~Er~~v~~~~~~~~~gr~pviaGvg-~~~t~~ai~la~~a~ 93 (291)
T 3tak_A 18 GVDWKSLEKLVEWHIEQGTNSIVAVGTTGEASTLS---MEEHTQVIKEIIRVANKRIPIIAGTG-ANSTREAIELTKAAK 93 (291)
T ss_dssp CBCHHHHHHHHHHHHHHTCCEEEESSTTTTGGGSC---HHHHHHHHHHHHHHHTTSSCEEEECC-CSSHHHHHHHHHHHH
T ss_pred CcCHHHHHHHHHHHHHCCCCEEEECccccccccCC---HHHHHHHHHHHHHHhCCCCeEEEeCC-CCCHHHHHHHHHHHH
Confidence 456777888999989999999988664 433444 455666776666542 2344433221 11133 5566677
Q ss_pred HcCCCeeec
Q 018731 204 HSGLDVFAH 212 (351)
Q Consensus 204 ~aG~~~i~~ 212 (351)
++|.|.+.+
T Consensus 94 ~~Gadavlv 102 (291)
T 3tak_A 94 DLGADAALL 102 (291)
T ss_dssp HHTCSEEEE
T ss_pred hcCCCEEEE
Confidence 889999854
No 295
>2ehh_A DHDPS, dihydrodipicolinate synthase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.90A {Aquifex aeolicus}
Probab=50.75 E-value=25 Score=31.45 Aligned_cols=78 Identities=14% Similarity=0.035 Sum_probs=49.1
Q ss_pred CCchhHHHHHHHHHhCCCcEEEEecc--CCCCCCCCcHHHHHHHHHHHHHhCC-CcEEEEeecCCCCCH---HHHHHHHH
Q 018731 131 PDPMEPENTAKAIASWGVDYIVLTSV--DRDDIPDGGSGHFARTVKAMKKQKP-DIMVECLTSDFRGDL---RAVETLVH 204 (351)
Q Consensus 131 ~~~eei~~~~~~~~~~G~~~I~ltgg--~~~~l~~~~~~~~~~li~~ik~~~p-~i~i~~~~~~~~~~~---e~l~~L~~ 204 (351)
.+.+...+.++.+.+.|++.+++.|. +...|. .+.-.++++.+.+... .+.|-+-+. ...+. +..+...+
T Consensus 18 iD~~~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls---~~Er~~v~~~~~~~~~grvpviaGvg-~~~t~~ai~la~~A~~ 93 (294)
T 2ehh_A 18 VDYEALGNLIEFHVDNGTDAILVCGTTGESPTLT---FEEHEKVIEFAVKRAAGRIKVIAGTG-GNATHEAVHLTAHAKE 93 (294)
T ss_dssp ECHHHHHHHHHHHHTTTCCEEEESSTTTTGGGSC---HHHHHHHHHHHHHHHTTSSEEEEECC-CSCHHHHHHHHHHHHH
T ss_pred cCHHHHHHHHHHHHHCCCCEEEECccccChhhCC---HHHHHHHHHHHHHHhCCCCcEEEecC-CCCHHHHHHHHHHHHh
Confidence 56677888999999999999988664 444454 3556667776665432 355433222 11234 44555677
Q ss_pred cCCCeeec
Q 018731 205 SGLDVFAH 212 (351)
Q Consensus 205 aG~~~i~~ 212 (351)
+|.|.+.+
T Consensus 94 ~Gadavlv 101 (294)
T 2ehh_A 94 VGADGALV 101 (294)
T ss_dssp TTCSEEEE
T ss_pred cCCCEEEE
Confidence 89998754
No 296
>2r8w_A AGR_C_1641P; APC7498, dihydrodipicolinate synthase, agrobacterium tumefac C58, structural genomics, PSI-2; HET: MSE; 1.80A {Agrobacterium tumefaciens str}
Probab=50.75 E-value=22 Score=32.50 Aligned_cols=79 Identities=9% Similarity=-0.080 Sum_probs=50.2
Q ss_pred CCCchhHHHHHHHHHhCCCcEEEEecc--CCCCCCCCcHHHHHHHHHHHHHhCC-CcEEEEeecCCCCCH---HHHHHHH
Q 018731 130 PPDPMEPENTAKAIASWGVDYIVLTSV--DRDDIPDGGSGHFARTVKAMKKQKP-DIMVECLTSDFRGDL---RAVETLV 203 (351)
Q Consensus 130 ~~~~eei~~~~~~~~~~G~~~I~ltgg--~~~~l~~~~~~~~~~li~~ik~~~p-~i~i~~~~~~~~~~~---e~l~~L~ 203 (351)
..+.+...+.++.+.+.|++.+++.|. +...|. .+.-.++++.+.+... .+.|-+-+.. ..+. +..+...
T Consensus 51 ~iD~~~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls---~eEr~~vi~~~ve~~~grvpViaGvg~-~st~eai~la~~A~ 126 (332)
T 2r8w_A 51 RVDIEAFSALIARLDAAEVDSVGILGSTGIYMYLT---REERRRAIEAAATILRGRRTLMAGIGA-LRTDEAVALAKDAE 126 (332)
T ss_dssp CBCHHHHHHHHHHHHHHTCSEEEESSTTTTGGGSC---HHHHHHHHHHHHHHHTTSSEEEEEECC-SSHHHHHHHHHHHH
T ss_pred CcCHHHHHHHHHHHHHcCCCEEEECccccChhhCC---HHHHHHHHHHHHHHhCCCCcEEEecCC-CCHHHHHHHHHHHH
Confidence 356677889999998999999998664 444454 4566677776665432 3554332221 1234 4556667
Q ss_pred HcCCCeeec
Q 018731 204 HSGLDVFAH 212 (351)
Q Consensus 204 ~aG~~~i~~ 212 (351)
++|.|.+.+
T Consensus 127 ~~Gadavlv 135 (332)
T 2r8w_A 127 AAGADALLL 135 (332)
T ss_dssp HHTCSEEEE
T ss_pred hcCCCEEEE
Confidence 789998854
No 297
>3kxq_A Triosephosphate isomerase; ssgcid, NIH, niaid, SBRI, UW, gluconeogenesis, glycolysis, pentose shunt; 1.60A {Bartonella henselae}
Probab=50.71 E-value=47 Score=29.54 Aligned_cols=57 Identities=18% Similarity=0.183 Sum_probs=40.3
Q ss_pred HHHHHHHcCCCeeecchhchHHHHhhhcCCCCCHHHHHHHHHHHHHhCCCCeEEEeeeeeCCCCHHHHH
Q 018731 198 AVETLVHSGLDVFAHNIETVKRLQRIVRDPRAGYEQSLEVLKHAKLSKKGLITKSSIMLGLGESDDDLK 266 (351)
Q Consensus 198 ~l~~L~~aG~~~i~~~ies~~~~~~~~r~~~~~~~~~l~~i~~~~~~~~Gi~v~~~~IvGlgEt~e~~~ 266 (351)
-...|++.|++.+-+|- ++ +|.+- +.+-+.+-+.++.+.+ .|+. .|+-.|||.++..
T Consensus 104 S~~mLkd~G~~~VIiGH---SE-RR~~f--~Etde~V~~Kv~~Al~--~GL~----pIlCVGEtleeRe 160 (275)
T 3kxq_A 104 SAFMLKEAGASHVIIGH---SE-RRTVY--QESDAIVRAKVQAAWR--AGLV----ALICVGETLEERK 160 (275)
T ss_dssp CHHHHHHHTCSEEEESC---HH-HHHHT--CCCHHHHHHHHHHHHH--TTCE----EEEEECCCHHHHH
T ss_pred CHHHHHHcCCCEEEECc---hh-hcccc--CCCHHHHHHHHHHHHH--CCCE----EEEEeCCCHHHHH
Confidence 35678899999998762 22 23332 5677777788888888 8986 3566699988774
No 298
>3dx5_A Uncharacterized protein ASBF; beta-alpha barrel, petrobactin synthesis, ASB locus, structu genomics, PSI-2, protein structure initiative; HET: MSE DHB TRS; 2.12A {Bacillus anthracis}
Probab=50.64 E-value=47 Score=28.77 Aligned_cols=79 Identities=13% Similarity=0.040 Sum_probs=39.6
Q ss_pred HHHHHHHHHcCCCeeecchhchHHHHhhhcCCCCCHHHHHHHHHHHHHhCCCCeEEEee-eeeC--CC----CHHHHHHH
Q 018731 196 LRAVETLVHSGLDVFAHNIETVKRLQRIVRDPRAGYEQSLEVLKHAKLSKKGLITKSSI-MLGL--GE----SDDDLKEA 268 (351)
Q Consensus 196 ~e~l~~L~~aG~~~i~~~ies~~~~~~~~r~~~~~~~~~l~~i~~~~~~~~Gi~v~~~~-IvGl--gE----t~e~~~~~ 268 (351)
++.++.++++|++.|-+.......+. ..+..+.-+.-+.+.+ .|+.+.+.- .+++ .+ ..+.+.+.
T Consensus 18 ~~~l~~~~~~G~~~vEl~~~~~~~~~------~~~~~~~~~~~~~l~~--~gl~~~~~~~~~~~~~~~~~~~~~~~~~~~ 89 (286)
T 3dx5_A 18 TDIVQFAYENGFEGIELWGTHAQNLY------MQEYETTERELNCLKD--KTLEITMISDYLDISLSADFEKTIEKCEQL 89 (286)
T ss_dssp HHHHHHHHHTTCCEEEEEHHHHHHHH------HHCHHHHHHHHHHTGG--GTCCEEEEECCCCCSTTSCHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCCEEEEccccccccc------ccCHHHHHHHHHHHHH--cCCeEEEEecCCCCCCchhHHHHHHHHHHH
Confidence 56777788888887755211000010 1122333333344455 677654321 1121 11 13455667
Q ss_pred HHHHHhCCCCEEee
Q 018731 269 MADLRSIDVDILTL 282 (351)
Q Consensus 269 l~~l~~lg~d~i~i 282 (351)
++.+.++|+..+.+
T Consensus 90 i~~A~~lG~~~v~~ 103 (286)
T 3dx5_A 90 AILANWFKTNKIRT 103 (286)
T ss_dssp HHHHHHHTCCEEEE
T ss_pred HHHHHHhCCCEEEE
Confidence 77777778777766
No 299
>2wkj_A N-acetylneuraminate lyase; directed evolution, sialic acid mimetics, aldolase, S base, carbohydrate metabolism, N-acetylneuraminic acid LYAS; HET: KPI PYR; 1.45A {Escherichia coli} PDB: 2wnq_A 2xfw_A* 2wpb_A* 2wnz_A* 2ygy_A* 2wo5_A* 2wnn_A* 3lbm_A 3lbc_A 3lcf_A 3lcl_A 3lcg_A 3lch_A 3lci_A 1hl2_A 1fdy_A 1fdz_A 1nal_1 3lcx_A 3lcw_A
Probab=50.60 E-value=24 Score=31.80 Aligned_cols=79 Identities=8% Similarity=0.025 Sum_probs=50.3
Q ss_pred CCCchhHHHHHHHHHhCCCcEEEEecc--CCCCCCCCcHHHHHHHHHHHHHhC-CCcEEEEeecCCCCCH---HHHHHHH
Q 018731 130 PPDPMEPENTAKAIASWGVDYIVLTSV--DRDDIPDGGSGHFARTVKAMKKQK-PDIMVECLTSDFRGDL---RAVETLV 203 (351)
Q Consensus 130 ~~~~eei~~~~~~~~~~G~~~I~ltgg--~~~~l~~~~~~~~~~li~~ik~~~-p~i~i~~~~~~~~~~~---e~l~~L~ 203 (351)
..+.+...+.++.+.+.|++.+++.|. +...|. .+.-.++++.+.+.. ..+.|-+-+.. ..+. +..+...
T Consensus 28 ~iD~~~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls---~eEr~~v~~~~~~~~~grvpViaGvg~-~~t~~ai~la~~A~ 103 (303)
T 2wkj_A 28 ALDKASLRRLVQFNIQQGIDGLYVGGSTGEAFVQS---LSEREQVLEIVAEEAKGKIKLIAHVGC-VSTAESQQLAASAK 103 (303)
T ss_dssp SBCHHHHHHHHHHHHHTTCSEEEESSTTTTGGGSC---HHHHHHHHHHHHHHHTTTSEEEEECCC-SSHHHHHHHHHHHH
T ss_pred CcCHHHHHHHHHHHHHcCCCEEEECeeccChhhCC---HHHHHHHHHHHHHHhCCCCcEEEecCC-CCHHHHHHHHHHHH
Confidence 456777889999999999999998664 444454 455666777666542 23555432221 1234 4555667
Q ss_pred HcCCCeeec
Q 018731 204 HSGLDVFAH 212 (351)
Q Consensus 204 ~aG~~~i~~ 212 (351)
++|.|.+.+
T Consensus 104 ~~Gadavlv 112 (303)
T 2wkj_A 104 RYGFDAVSA 112 (303)
T ss_dssp HHTCSEEEE
T ss_pred hCCCCEEEe
Confidence 789998854
No 300
>4hjf_A Ggdef family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, EAL domain, signaling protein; HET: MSE C2E; 1.75A {Caulobacter crescentus}
Probab=50.53 E-value=99 Score=28.04 Aligned_cols=58 Identities=16% Similarity=0.151 Sum_probs=34.7
Q ss_pred HHHHH-HHHHHHhCCCCeEEEeeeeeCCCCHHHHHHHHHHHHhCCCCEEeeecccCCCCCcccccCCCCHHHHHHHHHH
Q 018731 233 QSLEV-LKHAKLSKKGLITKSSIMLGLGESDDDLKEAMADLRSIDVDILTLGQYLQPTPLHLTVKEYVTPEKFDFWKAY 310 (351)
Q Consensus 233 ~~l~~-i~~~~~~~~Gi~v~~~~IvGlgEt~e~~~~~l~~l~~lg~d~i~i~~~l~PTp~~~~~~~~v~~~e~~~~~~~ 310 (351)
..+++ +..+++ .|+.|-+- | -||.++ +++++++|++.+.=+.|.+| ++++++..|.+.
T Consensus 269 ~iv~~ii~la~~--lg~~vvAE---G-VEt~~q----~~~L~~lG~d~~QGy~~~~P----------~~~~~~~~~l~~ 327 (340)
T 4hjf_A 269 KIVRSVVKLGQD--LDLEVVAE---G-VENAEM----AHALQSLGCDYGQGFGYAPA----------LSPQEAEVYLNE 327 (340)
T ss_dssp HHHHHHHHHHHH--HTCEEEEE---C-CCSHHH----HHHHHHTTCCEEESTTTCCS----------BCHHHHHHHHHH
T ss_pred HHHHHHHHHHHH--cCCEEEEE---e-CCcHHH----HHHHHHcCCCEeecCccccC----------CCHHHHHHHHHh
Confidence 34444 456677 78865332 3 377665 47778999998765322233 456677666443
No 301
>1twd_A Copper homeostasis protein CUTC; TIM-like protein, structural genomics, PSI, protein structure initiative; 1.70A {Shigella flexneri} SCOP: c.1.30.1 PDB: 1x7i_A 1x8c_A
Probab=50.52 E-value=30 Score=30.47 Aligned_cols=69 Identities=12% Similarity=0.180 Sum_probs=41.7
Q ss_pred HHHHHHHHHhCCCcEEEEeccCCCCCCCCcHHHHHHHHHHHHHhCCCcEEEEeecCCCCCHHHHHHHHHcCCCeeecc
Q 018731 136 PENTAKAIASWGVDYIVLTSVDRDDIPDGGSGHFARTVKAMKKQKPDIMVECLTSDFRGDLRAVETLVHSGLDVFAHN 213 (351)
Q Consensus 136 i~~~~~~~~~~G~~~I~ltgg~~~~l~~~~~~~~~~li~~ik~~~p~i~i~~~~~~~~~~~e~l~~L~~aG~~~i~~~ 213 (351)
+.+.++.+.+.|+++|.=+|+.++ .. .+.+.+.++++ .. + +++++..++. +.+.+..+.+.|++.+..+
T Consensus 130 ~~~ale~L~~lG~~rILTSG~~~~-a~-~g~~~L~~Lv~----~a-~-~i~Im~GgGv-~~~Ni~~l~~tGv~e~H~S 198 (256)
T 1twd_A 130 PLYTLNNLAELGIARVLTSGQKSD-AL-QGLSKIMELIA----HR-D-APIIMAGAGV-RAENLHHFLDAGVLEVHSS 198 (256)
T ss_dssp HHHHHHHHHHHTCCEEEECTTSSS-TT-TTHHHHHHHHT----SS-S-CCEEEEESSC-CTTTHHHHHHHTCSEEEEC
T ss_pred HHHHHHHHHHcCCCEEECCCCCCC-HH-HHHHHHHHHHH----hh-C-CcEEEecCCc-CHHHHHHHHHcCCCeEeEC
Confidence 344566677789999874455443 32 24455555443 32 3 5555555554 5566666668999999865
No 302
>1w5q_A Delta-aminolevulinic acid dehydratase; synthase, evolution, metalloenzyme, porphobilinogen synthase, protein engineering,; 1.4A {Pseudomonas aeruginosa} PDB: 1w5p_A* 1w5o_A 1w5n_A 1w56_A 1w5m_A 1w54_A 1gzg_A* 1b4k_A 2woq_A* 2c14_A* 2c16_A* 2c19_A* 2c15_A* 2c18_A* 2c13_A*
Probab=50.38 E-value=24 Score=32.12 Aligned_cols=60 Identities=13% Similarity=0.148 Sum_probs=42.4
Q ss_pred CCCCCCCchhHHHHHHHHHhCCCcEEEEeccCCCCCCC-------CcHHHHHHHHHHHHHhCCCcEE
Q 018731 126 RNPAPPDPMEPENTAKAIASWGVDYIVLTSVDRDDIPD-------GGSGHFARTVKAMKKQKPDIMV 185 (351)
Q Consensus 126 ~~~~~~~~eei~~~~~~~~~~G~~~I~ltgg~~~~l~~-------~~~~~~~~li~~ik~~~p~i~i 185 (351)
.+..+.+.+.+.++++.+.+.|++.|.|-|..+..+.| ..-.-+.+.++.||+.+|++.|
T Consensus 58 PGv~r~sid~l~~~~~~~~~lGi~~v~LFgv~~~~~KD~~gs~A~~~~g~v~rair~iK~~~pdl~v 124 (337)
T 1w5q_A 58 PGVERLSIDQLLIEAEEWVALGIPALALFPVTPVEKKSLDAAEAYNPEGIAQRATRALRERFPELGI 124 (337)
T ss_dssp TTCEEEEHHHHHHHHHHHHHTTCCEEEEEECCCGGGCBSSCGGGGCTTSHHHHHHHHHHHHCTTSEE
T ss_pred CCceeeCHHHHHHHHHHHHHCCCCEEEEecCCCcccCCcccCccCCCCChHHHHHHHHHHHCCCeEE
Confidence 33444566889999999999999999888773322111 0012577899999999999754
No 303
>1x1o_A Nicotinate-nucleotide pyrophosphorylase; transferase, structural genomics, NPPSFA, national project O structural and functional analyses; 1.90A {Thermus thermophilus}
Probab=50.38 E-value=44 Score=29.89 Aligned_cols=63 Identities=17% Similarity=0.255 Sum_probs=41.7
Q ss_pred HHHHHHHHhCCCcEEEEeccCCCCCCCCcHHHHHHHHHHHHHhCCCcEEEEeecCCCCCHHHHHHHHHcCCCeeecc
Q 018731 137 ENTAKAIASWGVDYIVLTSVDRDDIPDGGSGHFARTVKAMKKQKPDIMVECLTSDFRGDLRAVETLVHSGLDVFAHN 213 (351)
Q Consensus 137 ~~~~~~~~~~G~~~I~ltgg~~~~l~~~~~~~~~~li~~ik~~~p~i~i~~~~~~~~~~~e~l~~L~~aG~~~i~~~ 213 (351)
.++++++.+.|++.|.+- + +. .+.+.+.++.++. .+.+++ .++ ++.+.+..+.++|+|.|+++
T Consensus 206 ~eea~eA~~aGaD~I~ld--~---~~---~~~~k~av~~v~~---~ipi~A--sGG-It~eni~~~a~tGvD~IsVg 268 (286)
T 1x1o_A 206 LEELEEALEAGADLILLD--N---FP---LEALREAVRRVGG---RVPLEA--SGN-MTLERAKAAAEAGVDYVSVG 268 (286)
T ss_dssp HHHHHHHHHHTCSEEEEE--S---CC---HHHHHHHHHHHTT---SSCEEE--ESS-CCHHHHHHHHHHTCSEEECT
T ss_pred HHHHHHHHHcCCCEEEEC--C---CC---HHHHHHHHHHhCC---CCeEEE--EcC-CCHHHHHHHHHcCCCEEEEc
Confidence 344555556788888772 2 22 2556666655542 355555 344 48999999999999999875
No 304
>1o5k_A DHDPS, dihydrodipicolinate synthase; TM1521, structural genomics, J protein structure initiative, joint center for structural G lyase; HET: MCL; 1.80A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 3pb2_A 3pb0_A
Probab=50.33 E-value=18 Score=32.63 Aligned_cols=78 Identities=12% Similarity=0.016 Sum_probs=48.8
Q ss_pred CCchhHHHHHHHHHhCCCcEEEEec--cCCCCCCCCcHHHHHHHHHHHHHhCC-CcEEEEeecCCCCCH---HHHHHHHH
Q 018731 131 PDPMEPENTAKAIASWGVDYIVLTS--VDRDDIPDGGSGHFARTVKAMKKQKP-DIMVECLTSDFRGDL---RAVETLVH 204 (351)
Q Consensus 131 ~~~eei~~~~~~~~~~G~~~I~ltg--g~~~~l~~~~~~~~~~li~~ik~~~p-~i~i~~~~~~~~~~~---e~l~~L~~ 204 (351)
.+.+...+.++.+.+.|++.+++.| |+...|. .+.-.++++.+.+... .+.|-+-+. ...+. +..+...+
T Consensus 30 iD~~~l~~lv~~li~~Gv~gl~v~GtTGE~~~Ls---~eEr~~vi~~~~~~~~grvpViaGvg-~~st~~ai~la~~A~~ 105 (306)
T 1o5k_A 30 LDLESYERLVRYQLENGVNALIVLGTTGESPTVN---EDEREKLVSRTLEIVDGKIPVIVGAG-TNSTEKTLKLVKQAEK 105 (306)
T ss_dssp ECHHHHHHHHHHHHHTTCCEEEESSGGGTGGGCC---HHHHHHHHHHHHHHHTTSSCEEEECC-CSCHHHHHHHHHHHHH
T ss_pred cCHHHHHHHHHHHHHcCCCEEEeCccccchhhCC---HHHHHHHHHHHHHHhCCCCeEEEcCC-CccHHHHHHHHHHHHh
Confidence 5667788899999999999998865 4544455 3555666666655422 344433222 11234 45555677
Q ss_pred cCCCeeec
Q 018731 205 SGLDVFAH 212 (351)
Q Consensus 205 aG~~~i~~ 212 (351)
+|.|.+.+
T Consensus 106 ~Gadavlv 113 (306)
T 1o5k_A 106 LGANGVLV 113 (306)
T ss_dssp HTCSEEEE
T ss_pred cCCCEEEE
Confidence 89998754
No 305
>3ly0_A Dipeptidase AC. metallo peptidase. merops family M19; structural genomics, nysgrc, target 9523C, phosphinate inhibitor, PSI-2; HET: LY0; 1.40A {Rhodobacter sphaeroides} PDB: 3fdg_A
Probab=50.10 E-value=75 Score=29.44 Aligned_cols=159 Identities=11% Similarity=0.071 Sum_probs=86.4
Q ss_pred HHHHHHhCCCcEEEEeccCCCCC-------------CCCcHHHH-HHHHHHHHHhCCCcEEEEeecCCCCCH-HHHHHHH
Q 018731 139 TAKAIASWGVDYIVLTSVDRDDI-------------PDGGSGHF-ARTVKAMKKQKPDIMVECLTSDFRGDL-RAVETLV 203 (351)
Q Consensus 139 ~~~~~~~~G~~~I~ltgg~~~~l-------------~~~~~~~~-~~li~~ik~~~p~i~i~~~~~~~~~~~-e~l~~L~ 203 (351)
.++.+.++|++.+.+|=..+..+ .+.++..+ .++++++.+. ++-|.+.. .++ ...+.+.
T Consensus 150 ~L~~~y~lGvR~~~Lt~n~~N~~a~g~~~~~~~~~~~~~GLT~~G~~vV~emnrl--GmivDlSH----~s~~t~~dvl~ 223 (364)
T 3ly0_A 150 ALHLFHSLGLRSLGPVWSRPTVFGHGVPFRFPGSPDTGEGLTEAGRRLVAECNRL--KIMLDLSH----LNEKGFDDVAR 223 (364)
T ss_dssp HHHHHHHHTEEEEESCSSSCBTTBCBCCCEESCCSCCSCCCCHHHHHHHHHHHHH--TCEEBCTT----BCHHHHHHHHH
T ss_pred HHHHHHHhCCeEEEeeccCCCccccccccccCCCCCCCCCCCHHHHHHHHHHHHc--CCEEEcCC----CCHHHHHHHHH
Confidence 45667788999998863211111 11234444 3677777776 66666532 233 3344444
Q ss_pred HcCCCe-eecchhchHHHHhhhcCCCCCHHHHHHHHHHHHHhCCCCeEEEeeeeeC-C--------CCHHHHHHHHHHHH
Q 018731 204 HSGLDV-FAHNIETVKRLQRIVRDPRAGYEQSLEVLKHAKLSKKGLITKSSIMLGL-G--------ESDDDLKEAMADLR 273 (351)
Q Consensus 204 ~aG~~~-i~~~ies~~~~~~~~r~~~~~~~~~l~~i~~~~~~~~Gi~v~~~~IvGl-g--------Et~e~~~~~l~~l~ 273 (351)
-+..-. ++|+ +...+.. .++.-.++.+++|. + .|=-+..++.-.+ + -|.+++.++++.+.
T Consensus 224 ~s~~PviaSHS--naral~~---h~RNl~De~l~ala---~--~GGvigv~f~~~fl~~~~~~~~~~tl~~~~~Hi~hi~ 293 (364)
T 3ly0_A 224 LSDAPLVATHS--NAHAVTP---STRNLTDRQLAMIR---E--SRGMVGLNFATSFLREDGRRSAEMGWEPVLRHLDHLI 293 (364)
T ss_dssp HCSSCCEETTC--CBTTTSC---CTTSBCHHHHHHHH---H--TTCEEEECCCHHHHSTTCCCCSCCCSHHHHHHHHHHH
T ss_pred hcCCCeEEeCC--chhhcCC---CCCCCCHHHHHHHH---H--cCcEEEEeccHhhhcCCCCCCCCCCHHHHHHHHHHHH
Confidence 333222 2332 1111211 12334455555543 3 4444666666555 3 27899999999987
Q ss_pred h-CCCCEEeeeccc-CC-CCCcccccCCCCHHHHHHHHHHHHhcCcce
Q 018731 274 S-IDVDILTLGQYL-QP-TPLHLTVKEYVTPEKFDFWKAYGESIGFRY 318 (351)
Q Consensus 274 ~-lg~d~i~i~~~l-~P-Tp~~~~~~~~v~~~e~~~~~~~~~~~G~~~ 318 (351)
+ .|+|+|.++.=+ -. +|. ..-+...+..+.+.+.+.||..
T Consensus 294 ~l~G~dhVgiGsDfdG~~~p~-----gl~d~s~~p~L~~~L~~rG~se 336 (364)
T 3ly0_A 294 DRLGEDHVGMGSDFDGATIPQ-----GIADVTGLPALQAAMRAHGYDE 336 (364)
T ss_dssp HHHCTTSEEECCCBTTSCCCT-----TTCSGGGHHHHHHHHHHHTCCH
T ss_pred HhcCCCeEEECCCCCCCCCCC-----CCCCHHHHHHHHHHHHHCCCCH
Confidence 7 689999997322 11 221 1223456777777666678754
No 306
>1o5x_A TIM, triosephosphate isomerase; 2- phosphoglycerate, META-phosphate, catalytic LOOP6; HET: 2PG; 1.10A {Plasmodium falciparum} SCOP: c.1.1.1 PDB: 1lzo_A 1m7o_A* 1m7p_A* 1lyx_A* 1ydv_A 2vfi_A* 3psw_A 3psv_A 3pwa_A 2vfh_A* 2vff_A 2vfg_A* 1vga_A 1woa_A* 1wob_A 3pvf_A 3py2_A 2vfd_A 2vfe_A*
Probab=50.03 E-value=48 Score=29.00 Aligned_cols=56 Identities=16% Similarity=0.065 Sum_probs=40.2
Q ss_pred HHHHHHHcCCCeeecchhchHHHHhhhcCCCCCHHHHHHHHHHHHHhCCCCeEEEeeeeeCCCCHHHH
Q 018731 198 AVETLVHSGLDVFAHNIETVKRLQRIVRDPRAGYEQSLEVLKHAKLSKKGLITKSSIMLGLGESDDDL 265 (351)
Q Consensus 198 ~l~~L~~aG~~~i~~~ies~~~~~~~~r~~~~~~~~~l~~i~~~~~~~~Gi~v~~~~IvGlgEt~e~~ 265 (351)
....|+++|++.+-+|- ..+|.+- +.+-+.+-+.++.+.+ .|+. .|+-.|||.++.
T Consensus 79 S~~mL~d~G~~~ViiGH----SERR~~f--~Etd~~v~~Kv~~Al~--~GL~----pI~CvGEtleer 134 (248)
T 1o5x_A 79 SAEIAKDLNIEYVIIGH----FERRKYF--HETDEDVREKLQASLK--NNLK----AVVCFGESLEQR 134 (248)
T ss_dssp CHHHHHHTTCCEEEECC----HHHHHHS--CCCHHHHHHHHHHHHH--TTCE----EEEEECCCHHHH
T ss_pred CHHHHHHcCCCEEEeCC----hhhhccc--CCCHHHHHHHHHHHHH--CCCE----EEEEcCCcHHHH
Confidence 35678899999987762 2233332 5677777788888888 8986 356669998876
No 307
>3ta6_A Triosephosphate isomerase; HET: FLC; 1.41A {Mycobacterium tuberculosis} SCOP: c.1.1.0 PDB: 3tao_A* 3gvg_A
Probab=49.86 E-value=53 Score=29.08 Aligned_cols=87 Identities=11% Similarity=-0.012 Sum_probs=52.2
Q ss_pred HHHHHHHHHHHhCCCcEEEEeec----CCCCC-HHHHHHHHHcCCCeeecchhchHHHHhhhcCCCCCHHHHHHHHHHHH
Q 018731 168 HFARTVKAMKKQKPDIMVECLTS----DFRGD-LRAVETLVHSGLDVFAHNIETVKRLQRIVRDPRAGYEQSLEVLKHAK 242 (351)
Q Consensus 168 ~~~~li~~ik~~~p~i~i~~~~~----~~~~~-~e~l~~L~~aG~~~i~~~ies~~~~~~~~r~~~~~~~~~l~~i~~~~ 242 (351)
++..+.+.++...+.+.+.+..- .+..+ +=-...|++.|++.+-+|- ++ +|.+- +.+-+.+-+.++.+.
T Consensus 49 ~L~~v~~~~~~~~~~i~vgAQn~~~~~~GAfTGEIS~~mLkd~G~~~ViiGH---SE-RR~~f--~Etde~V~~Kv~~Al 122 (267)
T 3ta6_A 49 DLRSVQTLVDGDKLRLTYGAQDLSPHDSGAYTGDVSGAFLAKLGCSYVVVGH---SE-RRTYH--NEDDALVAAKAATAL 122 (267)
T ss_dssp GHHHHHHHHHHTTCSCEEEESCCCSSSSBSCTTCCCHHHHHHTTCCEEEESC---HH-HHHHT--TCCHHHHHHHHHHHH
T ss_pred HHHHHHHHhcCCCCceEEEecccCCCCCCCccCcccHHHHHHcCCCEEEEcc---hh-hcccc--CCCHHHHHHHHHHHH
Confidence 45555556654322366654221 11112 2245678899999998762 22 23332 456667777788888
Q ss_pred HhCCCCeEEEeeeeeCCCCHHHHH
Q 018731 243 LSKKGLITKSSIMLGLGESDDDLK 266 (351)
Q Consensus 243 ~~~~Gi~v~~~~IvGlgEt~e~~~ 266 (351)
+ .|+. .|+-.|||.++..
T Consensus 123 ~--~GL~----pIlCvGEtleeRe 140 (267)
T 3ta6_A 123 K--HGLT----PIVCIGEHLDVRE 140 (267)
T ss_dssp H--TTCE----EEEEECCCHHHHH
T ss_pred H--CCCe----EEEEeCCCHHHHh
Confidence 8 8986 3566699988763
No 308
>1yxy_A Putative N-acetylmannosamine-6-phosphate 2-epimer; structural genomics, epimerase, PSI, structure initiative; 1.60A {Streptococcus pyogenes} SCOP: c.1.2.5
Probab=49.85 E-value=78 Score=26.72 Aligned_cols=122 Identities=13% Similarity=0.213 Sum_probs=70.2
Q ss_pred HHHHHHHHhCCCcEEEEeccCCCCCCCCcHHHHHHHHHHHHHhCCCcEEEEeecCCCCCHHHHHHHHHcCCCeee---cc
Q 018731 137 ENTAKAIASWGVDYIVLTSVDRDDIPDGGSGHFARTVKAMKKQKPDIMVECLTSDFRGDLRAVETLVHSGLDVFA---HN 213 (351)
Q Consensus 137 ~~~~~~~~~~G~~~I~ltgg~~~~l~~~~~~~~~~li~~ik~~~p~i~i~~~~~~~~~~~e~l~~L~~aG~~~i~---~~ 213 (351)
.+.++.+.+.|++.|.+...... -+++ ..+.++++.+++.+++..+-... .+.+.+..+.++|+|.|. .+
T Consensus 91 ~~~i~~~~~~Gad~V~l~~~~~~-~~~~--~~~~~~i~~i~~~~~~~~v~~~~----~t~~ea~~a~~~Gad~i~~~v~g 163 (234)
T 1yxy_A 91 MTEVDQLAALNIAVIAMDCTKRD-RHDG--LDIASFIRQVKEKYPNQLLMADI----STFDEGLVAHQAGIDFVGTTLSG 163 (234)
T ss_dssp HHHHHHHHTTTCSEEEEECCSSC-CTTC--CCHHHHHHHHHHHCTTCEEEEEC----SSHHHHHHHHHTTCSEEECTTTT
T ss_pred HHHHHHHHHcCCCEEEEcccccC-CCCC--ccHHHHHHHHHHhCCCCeEEEeC----CCHHHHHHHHHcCCCEEeeeccc
Confidence 44566778899998877543311 1110 14578888898887776554321 256778888999999982 23
Q ss_pred hhchHHHHhhhcCCCCCHHHHHHHHHHHHHhCCCCeEEEeeeeeCCCC-HHHHHHHHHHHHhCCCCEEeeec
Q 018731 214 IETVKRLQRIVRDPRAGYEQSLEVLKHAKLSKKGLITKSSIMLGLGES-DDDLKEAMADLRSIDVDILTLGQ 284 (351)
Q Consensus 214 ies~~~~~~~~r~~~~~~~~~l~~i~~~~~~~~Gi~v~~~~IvGlgEt-~e~~~~~l~~l~~lg~d~i~i~~ 284 (351)
..... +... ..+ ++.++.+++ .++. ++..=|=+ .+++.+. .+.|+|.+.++.
T Consensus 164 ~~~~~---~~~~--~~~----~~~i~~~~~--~~ip----via~GGI~s~~~~~~~----~~~Gad~v~vGs 216 (234)
T 1yxy_A 164 YTPYS---RQEA--GPD----VALIEALCK--AGIA----VIAEGKIHSPEEAKKI----NDLGVAGIVVGG 216 (234)
T ss_dssp SSTTS---CCSS--SCC----HHHHHHHHH--TTCC----EEEESCCCSHHHHHHH----HTTCCSEEEECH
T ss_pred cCCCC---cCCC--CCC----HHHHHHHHh--CCCC----EEEECCCCCHHHHHHH----HHCCCCEEEEch
Confidence 32111 1011 223 355566665 4443 22221444 7776554 457999988864
No 309
>2v9d_A YAGE; dihydrodipicolinic acid synthase, N-acetyl neuraminate lyase, NAL, lyase, DHDPS, prophage; 2.15A {Escherichia coli} PDB: 2v8z_A 3nev_A* 3n2x_A*
Probab=49.72 E-value=20 Score=33.04 Aligned_cols=79 Identities=10% Similarity=0.013 Sum_probs=49.5
Q ss_pred CCCchhHHHHHHHHHhCCCcEEEEec--cCCCCCCCCcHHHHHHHHHHHHHhCC-CcEEEEeecCCCCCH---HHHHHHH
Q 018731 130 PPDPMEPENTAKAIASWGVDYIVLTS--VDRDDIPDGGSGHFARTVKAMKKQKP-DIMVECLTSDFRGDL---RAVETLV 203 (351)
Q Consensus 130 ~~~~eei~~~~~~~~~~G~~~I~ltg--g~~~~l~~~~~~~~~~li~~ik~~~p-~i~i~~~~~~~~~~~---e~l~~L~ 203 (351)
..+.+...+.++.+.+.|++.|++.| |+...|. .+.-.++++.+.+... .+.|-+-+.. ..+. +..+...
T Consensus 48 ~ID~~~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls---~eEr~~vi~~~ve~~~grvpViaGvg~-~st~eai~la~~A~ 123 (343)
T 2v9d_A 48 QLDKPGTAALIDDLIKAGVDGLFFLGSGGEFSQLG---AEERKAIARFAIDHVDRRVPVLIGTGG-TNARETIELSQHAQ 123 (343)
T ss_dssp SBCHHHHHHHHHHHHHTTCSCEEESSTTTTGGGSC---HHHHHHHHHHHHHHHTTSSCEEEECCS-SCHHHHHHHHHHHH
T ss_pred CcCHHHHHHHHHHHHHcCCCEEEeCccccChhhCC---HHHHHHHHHHHHHHhCCCCcEEEecCC-CCHHHHHHHHHHHH
Confidence 45677788999999999999998866 4444454 3556666766665422 3444332221 1234 4555567
Q ss_pred HcCCCeeec
Q 018731 204 HSGLDVFAH 212 (351)
Q Consensus 204 ~aG~~~i~~ 212 (351)
++|.|.+.+
T Consensus 124 ~~Gadavlv 132 (343)
T 2v9d_A 124 QAGADGIVV 132 (343)
T ss_dssp HHTCSEEEE
T ss_pred hcCCCEEEE
Confidence 789999854
No 310
>2j13_A Polysaccharide deacetylase; family 4, peptidoglycan, hydrolase, bacterial cell WALL, carbohydrate esterase; 1.7A {Bacillus anthracis} SCOP: c.6.2.3
Probab=49.64 E-value=26 Score=30.46 Aligned_cols=85 Identities=14% Similarity=0.105 Sum_probs=44.2
Q ss_pred cCCCCCHHHHHHHHHcCCCeeecchhchHHHHhhhcCCCCCHHHHHHHHHHHHHhCCCCeEEEeeeeeC---CCCHHHHH
Q 018731 190 SDFRGDLRAVETLVHSGLDVFAHNIETVKRLQRIVRDPRAGYEQSLEVLKHAKLSKKGLITKSSIMLGL---GESDDDLK 266 (351)
Q Consensus 190 ~~~~~~~e~l~~L~~aG~~~i~~~ies~~~~~~~~r~~~~~~~~~l~~i~~~~~~~~Gi~v~~~~IvGl---gEt~e~~~ 266 (351)
|.+..++..++.+++.|...+..++++.|-.... ..+.+..++.+..-.. +| .+|+-+ ..|.+.+.
T Consensus 154 P~G~~~~~~~~~l~~~G~~~v~wsvd~~Dw~~~~----~~~~~~~~~~v~~~~~--~G-----~IiL~Hd~~~~t~~aL~ 222 (247)
T 2j13_A 154 PRGVFSERTLALTKEMGYYNVFWSLAFLDWKVDE----QRGWQYAHNNVMTMIH--PG-----SILLLHAISKDNAEALA 222 (247)
T ss_dssp GGGEECHHHHHHHHHTTCEEECCSEECCCC----------------------CC--TT-----BEEEECCCSTTHHHHHH
T ss_pred CCCCCCHHHHHHHHHCCCEEEecCcccCcCCCCC----CCCHHHHHHHHHHhcC--CC-----eEEEEeCCcHhHHHHHH
Confidence 4444577888888888888776666654321110 1122222222211111 44 234433 35677788
Q ss_pred HHHHHHHhCCCCEEeeecc
Q 018731 267 EAMADLRSIDVDILTLGQY 285 (351)
Q Consensus 267 ~~l~~l~~lg~d~i~i~~~ 285 (351)
+.+..+++.|...+++...
T Consensus 223 ~ii~~l~~~Gy~fvtl~el 241 (247)
T 2j13_A 223 KIIDDLREKGYHFKSLDDL 241 (247)
T ss_dssp HHHHHHHHTTCEEECHHHH
T ss_pred HHHHHHHHCCCEEEEhHHh
Confidence 8888888888887777443
No 311
>3vni_A Xylose isomerase domain protein TIM barrel; D-psicose 3-epimerase, ketohexose; 1.98A {Clostridium cellulolyticum} PDB: 3vnj_A* 3vnl_A* 3vnk_A* 3vnm_A*
Probab=49.59 E-value=64 Score=28.00 Aligned_cols=76 Identities=14% Similarity=0.113 Sum_probs=50.1
Q ss_pred HHHHHHHHHcCCCeeecchhchHHHHhhhcCCCCCHHHHHHHHHHHHHhCCCCeEEEee-e-e--eC-CCC-------HH
Q 018731 196 LRAVETLVHSGLDVFAHNIETVKRLQRIVRDPRAGYEQSLEVLKHAKLSKKGLITKSSI-M-L--GL-GES-------DD 263 (351)
Q Consensus 196 ~e~l~~L~~aG~~~i~~~ies~~~~~~~~r~~~~~~~~~l~~i~~~~~~~~Gi~v~~~~-I-v--Gl-gEt-------~e 263 (351)
++.++.++++|++.|-+...... ..+.++.-+.-+.+++ .|+.+.+.. . . .+ +.+ .+
T Consensus 20 ~~~l~~~~~~G~~~vEl~~~~~~---------~~~~~~~~~~~~~l~~--~gl~i~~~~~~~~~~~l~~~d~~~r~~~~~ 88 (294)
T 3vni_A 20 KYYIEKVAKLGFDILEIAASPLP---------FYSDIQINELKACAHG--NGITLTVGHGPSAEQNLSSPDPDIRKNAKA 88 (294)
T ss_dssp HHHHHHHHHHTCSEEEEESTTGG---------GCCHHHHHHHHHHHHH--TTCEEEEEECCCGGGCTTCSCHHHHHHHHH
T ss_pred HHHHHHHHHcCCCEEEecCcccC---------CcCHHHHHHHHHHHHH--cCCeEEEeecCCCCcCCCCCCHHHHHHHHH
Confidence 68999999999999977643311 2244444555556677 899876621 1 1 13 222 35
Q ss_pred HHHHHHHHHHhCCCCEEee
Q 018731 264 DLKEAMADLRSIDVDILTL 282 (351)
Q Consensus 264 ~~~~~l~~l~~lg~d~i~i 282 (351)
.+.+.++.+.++|+..+.+
T Consensus 89 ~~~~~i~~a~~lG~~~v~~ 107 (294)
T 3vni_A 89 FYTDLLKRLYKLDVHLIGG 107 (294)
T ss_dssp HHHHHHHHHHHHTCCEEEE
T ss_pred HHHHHHHHHHHhCCCeeec
Confidence 5677888889999998864
No 312
>1j93_A UROD, uroporphyrinogen decarboxylase; beta barrel, plastidial enzyme, crystallographic dimer, lyase; 2.30A {Nicotiana tabacum} SCOP: c.1.22.1
Probab=49.39 E-value=1.4e+02 Score=27.04 Aligned_cols=146 Identities=13% Similarity=0.111 Sum_probs=75.2
Q ss_pred HHHHHhCCCcEEEEeccCCCCCCC-----CcHHHHHHHHHHHHHhCCCcE-EEEeecCCCCCHHHHHHHHHcCCCeeecc
Q 018731 140 AKAIASWGVDYIVLTSVDRDDIPD-----GGSGHFARTVKAMKKQKPDIM-VECLTSDFRGDLRAVETLVHSGLDVFAHN 213 (351)
Q Consensus 140 ~~~~~~~G~~~I~ltgg~~~~l~~-----~~~~~~~~li~~ik~~~p~i~-i~~~~~~~~~~~e~l~~L~~aG~~~i~~~ 213 (351)
++...+.|++.|.+.......++. --.+++.++++.+++..|++. +.. ..+ ....++.+.+.|+|.+++.
T Consensus 199 ~~~~~~aGad~iqi~D~~~~~lsp~~f~ef~~p~~~~i~~~i~~~~~~~~~ih~--c~g--~~~~l~~l~~~g~d~~~~d 274 (353)
T 1j93_A 199 IRYQADSGAQAVQIFDSWATELSPVDFEEFSLPYLKQIVDSVKLTHPNLPLILY--ASG--SGGLLERLPLTGVDVVSLD 274 (353)
T ss_dssp HHHHHHTTCSEEEEECGGGGGSCHHHHHHHTHHHHHHHHHHHHHHSTTCCEEEE--CSS--CTTTGGGGGGGCCSEEECC
T ss_pred HHHHHHhCCCEEEEeCcccccCCHHHHHHHhHHHHHHHHHHHHHhCCCCCEEEE--CCC--hHHHHHHHHhcCCCEEEeC
Confidence 334457899987763211112321 113566777888887644433 222 222 2356788889999988653
Q ss_pred hhchHHHHhhhcCCCCCHHHHHHHHH--HHHHhCCCCeEEEeeeeeCCCCHHHHHHHHHHHHh-CCCCEEeeecccCCCC
Q 018731 214 IETVKRLQRIVRDPRAGYEQSLEVLK--HAKLSKKGLITKSSIMLGLGESDDDLKEAMADLRS-IDVDILTLGQYLQPTP 290 (351)
Q Consensus 214 ies~~~~~~~~r~~~~~~~~~l~~i~--~~~~~~~Gi~v~~~~IvGlgEt~e~~~~~l~~l~~-lg~d~i~i~~~l~PTp 290 (351)
-. .+.++..+.+. .+.. .|+.. .++ -.|.|++.+.++.+.+ ++.. .+ .+.|
T Consensus 275 ~~-------------~d~~~~~~~~g~~~~l~--Gnldp--~~l---~~~~e~i~~~v~~~l~~~~~~--g~--I~~~-- 328 (353)
T 1j93_A 275 WT-------------VDMADGRRRLGPNVAIQ--GNVDP--GVL---FGSKEFITNRINDTVKKAGKG--KH--ILNL-- 328 (353)
T ss_dssp TT-------------SCHHHHHHHTCSSSEEE--CCBCG--GGG---GSCHHHHHHHHHHHHHHHCSS--SE--EBCB--
T ss_pred CC-------------CCHHHHHHHcCCCeEEE--ecCCH--HHH---cCCHHHHHHHHHHHHHHhCCC--CE--EEeC--
Confidence 21 12222211110 0111 33332 222 3577887776665544 4542 22 2223
Q ss_pred CcccccCCCCHHHHHHHHHHHHhcCc
Q 018731 291 LHLTVKEYVTPEKFDFWKAYGESIGF 316 (351)
Q Consensus 291 ~~~~~~~~v~~~e~~~~~~~~~~~G~ 316 (351)
.+ .+...++++.+..+.+.+++.||
T Consensus 329 g~-gi~~~~~~enl~a~ve~v~~~~~ 353 (353)
T 1j93_A 329 GH-GIKVGTPEENFAHFFEIAKGLRY 353 (353)
T ss_dssp SS-CCCTTCCHHHHHHHHHHHHTCCC
T ss_pred CC-CCCCCCCHHHHHHHHHHHHHhcC
Confidence 21 12346778888888888887775
No 313
>3obk_A Delta-aminolevulinic acid dehydratase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, lyase; HET: PBG; 2.50A {Toxoplasma gondii ME49}
Probab=49.36 E-value=28 Score=31.91 Aligned_cols=79 Identities=14% Similarity=0.244 Sum_probs=50.9
Q ss_pred eEEEEeeccCCCCCCcCcccCCCCCCCCCCchhHHHHHHHHHhCCCcEEEEeccCCCCCCCC-c------HHHHHHHHHH
Q 018731 103 TATIMLLGDTCTRGCRFCAVKTSRNPAPPDPMEPENTAKAIASWGVDYIVLTSVDRDDIPDG-G------SGHFARTVKA 175 (351)
Q Consensus 103 ~~~~i~~s~gC~~~C~FC~~~~~~~~~~~~~eei~~~~~~~~~~G~~~I~ltgg~~~~l~~~-~------~~~~~~li~~ 175 (351)
...++.+..| ... -.+++..+..+.+.+.+.++++.+.+.|++.|.|-|..++...+. + -.-+.+.++.
T Consensus 46 LI~PlFV~eg-~~~---~~I~SMPGv~r~sid~l~~~~~~~~~lGi~av~LFgv~~p~~KD~~gs~A~~~~g~v~rAir~ 121 (356)
T 3obk_A 46 LIYPLFVHDE-ETS---VPIPSMPGQSRLSMEDLLKEVGEARSYGIKAFMLFPKVDDELKSVMAEESYNPDGLLPRAIMA 121 (356)
T ss_dssp EEEEEEEESS-SSC---EECTTSTTCEEECHHHHHHHHHHHHHTTCCEEEEEEECCGGGCBSSCGGGGCTTSHHHHHHHH
T ss_pred ceeeEEEecC-CCC---cccCCCCCceEECHHHHHHHHHHHHHCCCCEEEEecCCCcccCCcccccccCCCChHHHHHHH
Confidence 4445555555 211 244554555556778899999999999999998877632222210 0 0246678999
Q ss_pred HHHhCCCcEE
Q 018731 176 MKKQKPDIMV 185 (351)
Q Consensus 176 ik~~~p~i~i 185 (351)
||+.+|++.|
T Consensus 122 iK~~~P~l~V 131 (356)
T 3obk_A 122 LKEAFPDVLL 131 (356)
T ss_dssp HHHHSTTCEE
T ss_pred HHHHCCCCEE
Confidence 9999999754
No 314
>2vxn_A Triosephosphate isomerase; fatty acid biosynthesis, transition state analogue, glycolysis, pentose shunt, gluconeogenesis, TIM, glycosome; HET: PGH PGA; 0.82A {Leishmania mexicana} PDB: 1if2_A* 1qds_A 1n55_A* 2y61_A 2y62_A 2y63_A 1amk_A 1tpf_A 1iig_A 1ag1_O* 1iih_A 1tpd_A 1trd_A* 2v5l_A 4tim_A* 5tim_A 6tim_A*
Probab=49.34 E-value=50 Score=28.96 Aligned_cols=56 Identities=14% Similarity=0.142 Sum_probs=40.1
Q ss_pred HHHHHHHcCCCeeecchhchHHHHhhhcCCCCCHHHHHHHHHHHHHhCCCCeEEEeeeeeCCCCHHHH
Q 018731 198 AVETLVHSGLDVFAHNIETVKRLQRIVRDPRAGYEQSLEVLKHAKLSKKGLITKSSIMLGLGESDDDL 265 (351)
Q Consensus 198 ~l~~L~~aG~~~i~~~ies~~~~~~~~r~~~~~~~~~l~~i~~~~~~~~Gi~v~~~~IvGlgEt~e~~ 265 (351)
-...|+++|++.+-+|- ..+|.+- +.+-+.+-+.++.+.+ .|+. .|+-.|||.++.
T Consensus 80 S~~mL~d~G~~~ViiGH----SERR~~f--~Etd~~v~~Kv~~Al~--~GL~----pI~CvGEtleer 135 (251)
T 2vxn_A 80 SMPILKDIGVHWVILGH----SERRTYY--GETDEIVAQKVSEACK--QGFM----VIACIGETLQQR 135 (251)
T ss_dssp BHHHHHHTTCCEEEESC----HHHHHHS--CCCHHHHHHHHHHHHH--TTCE----EEEEECCCHHHH
T ss_pred CHHHHHHcCCCEEEECc----hhhhccc--CCCHHHHHHHHHHHHH--CCCE----EEEEcCCcHHHH
Confidence 35778899999998762 2233332 5677777788888888 8986 356668998876
No 315
>1r2r_A TIM, triosephosphate isomerase; closed loop conformation in the ligand-free state, conformational heterogeneity, TIM-barrel; 1.50A {Oryctolagus cuniculus} SCOP: c.1.1.1 PDB: 1r2s_A 1r2t_A 2jk2_A 1wyi_A 1hti_A 2vom_A 1tph_1* 8tim_A 1sw3_A 1spq_A 1tpb_1* 1tpw_A* 1sw7_A 1tpu_A* 1tpc_1* 1ssd_A 1ssg_A 1sw0_A 1sq7_A 1tpv_A* ...
Probab=49.32 E-value=56 Score=28.55 Aligned_cols=57 Identities=19% Similarity=0.138 Sum_probs=40.6
Q ss_pred HHHHHHHcCCCeeecchhchHHHHhhhcCCCCCHHHHHHHHHHHHHhCCCCeEEEeeeeeCCCCHHHHH
Q 018731 198 AVETLVHSGLDVFAHNIETVKRLQRIVRDPRAGYEQSLEVLKHAKLSKKGLITKSSIMLGLGESDDDLK 266 (351)
Q Consensus 198 ~l~~L~~aG~~~i~~~ies~~~~~~~~r~~~~~~~~~l~~i~~~~~~~~Gi~v~~~~IvGlgEt~e~~~ 266 (351)
....|+++|++.+-+|- ..+|.+- +.+-+.+-+.++.+.+ .|+. .|+..|||.++..
T Consensus 79 S~~mL~d~G~~~ViiGH----SERR~~f--~Etd~~v~~Kv~~Al~--~GL~----pI~CvGEtleere 135 (248)
T 1r2r_A 79 SPGMIKDCGATWVVLGH----SERRHVF--GESDELIGQKVAHALS--EGLG----VIACIGEKLDERE 135 (248)
T ss_dssp CHHHHHHTTCCEEEESC----HHHHHTS--CCCHHHHHHHHHHHHH--TTCE----EEEEECCCHHHHH
T ss_pred CHHHHHHcCCCEEEECC----hhhhccc--CCCHHHHHHHHHHHHH--CCCE----EEEEcCCcHHHHh
Confidence 35678899999987762 2233332 5677777788888888 8986 3566689988765
No 316
>2yc6_A Triosephosphate isomerase; glycolysis; HET: PGA; 1.45A {Giardia intestinalis} PDB: 2dp3_A 2yc7_A* 3pf3_A 2yc8_A
Probab=49.25 E-value=56 Score=28.73 Aligned_cols=56 Identities=29% Similarity=0.300 Sum_probs=39.8
Q ss_pred HHHHHHHcCCCeeecchhchHHHHhhhcCCCCCHHHHHHHHHHHHHhCCCCeEEEeeeeeCCCCHHHH
Q 018731 198 AVETLVHSGLDVFAHNIETVKRLQRIVRDPRAGYEQSLEVLKHAKLSKKGLITKSSIMLGLGESDDDL 265 (351)
Q Consensus 198 ~l~~L~~aG~~~i~~~ies~~~~~~~~r~~~~~~~~~l~~i~~~~~~~~Gi~v~~~~IvGlgEt~e~~ 265 (351)
-...|+++|++.+-+|- ..+|.+- +.+-+.+-+.++.+.+ .|+. .|+..|||.++.
T Consensus 80 S~~mL~d~G~~~ViiGH----SERR~~f--~Etd~~v~~Kv~~Al~--~GL~----pI~CvGEtleer 135 (257)
T 2yc6_A 80 SVEMLQDMGLKHVIVGH----SERRRIM--GETDEQSAKKAKRALE--KGMT----VIFCVGETLDER 135 (257)
T ss_dssp CHHHHHHTTCCEEEESC----HHHHHTS--CCCHHHHHHHHHHHHH--TTCE----EEEEECCCHHHH
T ss_pred CHHHHHHcCCCEEEECc----hhhcccc--CCCHHHHHHHHHHHHH--CCCE----EEEEcCCcHHHH
Confidence 35678899999998762 2233332 5677777788888888 8986 356669998874
No 317
>2qf7_A Pyruvate carboxylase protein; multi-domain, multi-functional, biotin-dependent, ligase; HET: KCX COA AGS; 2.00A {Rhizobium etli} PDB: 3tw6_A* 3tw7_A*
Probab=49.17 E-value=67 Score=34.72 Aligned_cols=75 Identities=15% Similarity=0.074 Sum_probs=49.9
Q ss_pred CchhHHHHHHHHHhCCCcEEEEeccCCCCCCCCcHHHHHHHHHHHHHhCCCc--EEEEeecCCCCCHHHHHHHHHcCCCe
Q 018731 132 DPMEPENTAKAIASWGVDYIVLTSVDRDDIPDGGSGHFARTVKAMKKQKPDI--MVECLTSDFRGDLRAVETLVHSGLDV 209 (351)
Q Consensus 132 ~~eei~~~~~~~~~~G~~~I~ltgg~~~~l~~~~~~~~~~li~~ik~~~p~i--~i~~~~~~~~~~~e~l~~L~~aG~~~ 209 (351)
+++.+.+.++++.+.|++.|.|-.-..-.. ...+.++++.+++.. ++ .+++ +++.-+--...-.-.++|++.
T Consensus 707 ~~~~~~~~~~~~~~~Ga~~i~l~DT~G~~~----P~~~~~lv~~l~~~~-~~~i~~H~-Hnd~GlAvAn~laAv~aGa~~ 780 (1165)
T 2qf7_A 707 DLKYYTNLAVELEKAGAHIIAVKDMAGLLK----PAAAKVLFKALREAT-GLPIHFHT-HDTSGIAAATVLAAVEAGVDA 780 (1165)
T ss_dssp CHHHHHHHHHHHHHTTCSEEEEEETTCCCC----HHHHHHHHHHHHHHC-SSCEEEEE-CBTTSCHHHHHHHHHHTTCSE
T ss_pred CHHHHHHHHHHHHHcCCCEEEEeCccCCcC----HHHHHHHHHHHHHhc-CCeEEEEE-CCCCCHHHHHHHHHHHhCCCE
Confidence 456678889999999999998854332212 368899999999876 44 4444 333222333444456799999
Q ss_pred eec
Q 018731 210 FAH 212 (351)
Q Consensus 210 i~~ 212 (351)
|..
T Consensus 781 vd~ 783 (1165)
T 2qf7_A 781 VDA 783 (1165)
T ss_dssp EEE
T ss_pred EEe
Confidence 864
No 318
>1b9b_A TIM, protein (triosephosphate isomerase); thermophilic; 2.85A {Thermotoga maritima} SCOP: c.1.1.1
Probab=49.13 E-value=54 Score=28.81 Aligned_cols=57 Identities=18% Similarity=0.150 Sum_probs=39.9
Q ss_pred HHHHHHHcCCCeeecchhchHHHHhhhcCCCCCHHHHHHHHHHHHHhCCCCeEEEeeeeeCCCCHHHHH
Q 018731 198 AVETLVHSGLDVFAHNIETVKRLQRIVRDPRAGYEQSLEVLKHAKLSKKGLITKSSIMLGLGESDDDLK 266 (351)
Q Consensus 198 ~l~~L~~aG~~~i~~~ies~~~~~~~~r~~~~~~~~~l~~i~~~~~~~~Gi~v~~~~IvGlgEt~e~~~ 266 (351)
....|+++|++.+-+|- ..+|.+- +.+-+.+-+.++.+.+ .|+. .|+..|||.++..
T Consensus 80 S~~mL~d~G~~~ViiGH----SERR~~f--~Etd~~v~~Kv~~Al~--~GL~----pI~CvGEtleere 136 (255)
T 1b9b_A 80 SPLMLQEIGVEYVIVGH----SERRRIF--KEDDEFINRKVKAVLE--KGMT----PILCVGETLEERE 136 (255)
T ss_dssp CHHHHHTTTCCEEEESC----HHHHHTS--CCCHHHHHHHHHHHHH--TTCE----EEEEECCCHHHHH
T ss_pred CHHHHHHcCCCEEEECc----hhhcccc--CCCHHHHHHHHHHHHH--CCCE----EEEEcCCcHHHHh
Confidence 35678899999988762 2233332 4576777777888888 8986 3566699988743
No 319
>4f3h_A Fimxeal, putative uncharacterized protein; fimxeal-C-DI-GMP, type IV pilus, signaling protein; HET: C2E; 2.50A {Xanthomonas campestris PV} PDB: 4f48_A*
Probab=48.99 E-value=68 Score=27.36 Aligned_cols=105 Identities=10% Similarity=0.114 Sum_probs=58.7
Q ss_pred HHHHHHHHHHHHhCCCcEEEEeecCCCCCHHHHHHHHHcCCCeeecchhchHHHHhhhcCCCCCHHHHHHH-HHHHHHhC
Q 018731 167 GHFARTVKAMKKQKPDIMVECLTSDFRGDLRAVETLVHSGLDVFAHNIETVKRLQRIVRDPRAGYEQSLEV-LKHAKLSK 245 (351)
Q Consensus 167 ~~~~~li~~ik~~~p~i~i~~~~~~~~~~~e~l~~L~~aG~~~i~~~ies~~~~~~~~r~~~~~~~~~l~~-i~~~~~~~ 245 (351)
+.+.+.++.+++. |+.+.+ .++-.....+..|.+..+|.|-+.- .+.+.+. ........++. +..+++
T Consensus 143 ~~~~~~l~~L~~~--G~~ial--DdfG~g~s~l~~L~~l~~d~iKiD~----~~v~~~~-~~~~~~~~l~~i~~~a~~-- 211 (250)
T 4f3h_A 143 RNAQQFLASVSAM--GCKVGL--EQFGSGLDSFQLLAHFQPAFLKLDR----SITGDIA-SARESQEKIREITSRAQP-- 211 (250)
T ss_dssp HHHHHHHHHHHTT--TCEEEE--EEETSSTHHHHHHTTSCCSEEEECH----HHHTTTT-TCSHHHHHHHHTHHHHHH--
T ss_pred HHHHHHHHHHHHC--CCEEEE--eCCCCCchHHHHHhhCCCCEEEECH----HHHHhHh-cChhhHHHHHHHHHHHHH--
Confidence 5667777777776 566544 2332244677788888888776541 1212121 12233344444 455566
Q ss_pred CCCeEEEeeeeeCCCCHHHHHHHHHHHHhCCCCEEeeecccCCCC
Q 018731 246 KGLITKSSIMLGLGESDDDLKEAMADLRSIDVDILTLGQYLQPTP 290 (351)
Q Consensus 246 ~Gi~v~~~~IvGlgEt~e~~~~~l~~l~~lg~d~i~i~~~l~PTp 290 (351)
.|+.+-+. | -||.+++ +.++++|++.+.=+.|-+|.|
T Consensus 212 l~~~viae---G-VEt~~~~----~~l~~~G~~~~QG~~~~~P~p 248 (250)
T 4f3h_A 212 TGILTVAE---F-VADAQSM----SSFFTAGVDYVQGDFVAPTGP 248 (250)
T ss_dssp HTCEEEEC---C-CCCHHHH----HHHHHHTCSEECSTTTCCCBS
T ss_pred cCCEEEEe---c-cCCHHHH----HHHHHcCCCEEeeccccCCCC
Confidence 67764222 2 3777764 567889999876532336644
No 320
>3jva_A Dipeptide epimerase; enolase superfamily, isomerase; 1.70A {Enterococcus faecalis V583} PDB: 3jw7_A* 3jzu_A* 3k1g_A* 3kum_A*
Probab=48.91 E-value=1.2e+02 Score=27.52 Aligned_cols=147 Identities=16% Similarity=0.111 Sum_probs=80.1
Q ss_pred CchhHHHHHHHHHhCCCcEEEEeccCCCCCCCCcHHHHHHHHHHHHHhC-CCcEEEEeecCCCCCHH----HHHHHHHcC
Q 018731 132 DPMEPENTAKAIASWGVDYIVLTSVDRDDIPDGGSGHFARTVKAMKKQK-PDIMVECLTSDFRGDLR----AVETLVHSG 206 (351)
Q Consensus 132 ~~eei~~~~~~~~~~G~~~I~ltgg~~~~l~~~~~~~~~~li~~ik~~~-p~i~i~~~~~~~~~~~e----~l~~L~~aG 206 (351)
++++..+.++.+.+.|++.+-+--|.. .+.-.+.++++++.. |++.+.+=.+.. .+.+ .++.|.+.|
T Consensus 139 ~~~~~~~~a~~~~~~G~~~~K~K~g~~-------~~~d~~~v~avR~a~g~~~~l~vDan~~-~~~~~a~~~~~~L~~~~ 210 (354)
T 3jva_A 139 EPNVMAQKAVEKVKLGFDTLKIKVGTG-------IEADIARVKAIREAVGFDIKLRLDANQA-WTPKDAVKAIQALADYQ 210 (354)
T ss_dssp CHHHHHHHHHHHHHTTCSEEEEECCSC-------HHHHHHHHHHHHHHHCTTSEEEEECTTC-SCHHHHHHHHHHTTTSC
T ss_pred CHHHHHHHHHHHHHhCCCeEEEEeCCC-------HHHHHHHHHHHHHHcCCCCeEEEECCCC-CCHHHHHHHHHHHHhcC
Confidence 578888888888889999988743332 145567888888864 666554423433 2543 334444445
Q ss_pred CCeeecchhchHHHHhhhcCCCCCHHHHHHHHHHHHHhCCCCeEEEeeeeeCCCCHHHHHHHHHHHHhCCCCEEeeeccc
Q 018731 207 LDVFAHNIETVKRLQRIVRDPRAGYEQSLEVLKHAKLSKKGLITKSSIMLGLGESDDDLKEAMADLRSIDVDILTLGQYL 286 (351)
Q Consensus 207 ~~~i~~~ies~~~~~~~~r~~~~~~~~~l~~i~~~~~~~~Gi~v~~~~IvGlgEt~e~~~~~l~~l~~lg~d~i~i~~~l 286 (351)
+..| |- ++ +..++ +.++.+++. .++.+.+ +|+..+..+..+.+..-.+|.+.+.
T Consensus 211 i~~i----Eq--P~------~~~d~----~~~~~l~~~-~~iPIa~------dE~~~~~~~~~~~l~~~~~d~v~~k--- 264 (354)
T 3jva_A 211 IELV----EQ--PV------KRRDL----EGLKYVTSQ-VNTTIMA------DESCFDAQDALELVKKGTVDVINIK--- 264 (354)
T ss_dssp EEEE----EC--CS------CTTCH----HHHHHHHHH-CSSEEEE------STTCCSHHHHHHHHHHTCCSEEEEC---
T ss_pred CCEE----EC--CC------ChhhH----HHHHHHHHh-CCCCEEE------cCCcCCHHHHHHHHHcCCCCEEEEC---
Confidence 5444 21 11 12233 233333331 4554333 4444444444455556678877772
Q ss_pred CCCCCcccccCCCCHHHHHHHHHHHHhcCcceec
Q 018731 287 QPTPLHLTVKEYVTPEKFDFWKAYGESIGFRYVA 320 (351)
Q Consensus 287 ~PTp~~~~~~~~v~~~e~~~~~~~~~~~G~~~~~ 320 (351)
++.. =...+..++.++++..|...+.
T Consensus 265 -~~~~-------GGit~~~~i~~~A~~~gi~~~~ 290 (354)
T 3jva_A 265 -LMKC-------GGIHEALKINQICETAGIECMI 290 (354)
T ss_dssp -HHHH-------TSHHHHHHHHHHHHHTTCEEEE
T ss_pred -chhc-------CCHHHHHHHHHHHHHcCCeEEe
Confidence 2111 1134566777778877777553
No 321
>2e6f_A Dihydroorotate dehydrogenase; chagas disease, pyrimidine biosynthesis, fumarate reductase, energy metabolism, redox homeostasis, flavoprotein; HET: FMN OXC; 1.26A {Trypanosoma cruzi} PDB: 2e6a_A* 2e6d_A* 2e68_A* 2djl_A* 2djx_A* 3c3n_A* 2b4g_A* 3c61_A* 3mhu_A* 3mjy_A*
Probab=48.89 E-value=43 Score=29.95 Aligned_cols=80 Identities=15% Similarity=0.083 Sum_probs=51.5
Q ss_pred CchhHHHHHHHHHhCC-CcEEEEeccCC-----C------CCC--------CC--cHHHHHHHHHHHHHhCCCcEEEEee
Q 018731 132 DPMEPENTAKAIASWG-VDYIVLTSVDR-----D------DIP--------DG--GSGHFARTVKAMKKQKPDIMVECLT 189 (351)
Q Consensus 132 ~~eei~~~~~~~~~~G-~~~I~ltgg~~-----~------~l~--------~~--~~~~~~~li~~ik~~~p~i~i~~~~ 189 (351)
+.+++.+.++.+.+.| ++.|.+++... + .+. .+ ......+.++.+++..+++.|-.
T Consensus 172 ~~~~~~~~a~~~~~aG~~d~i~v~~~~~~~~~i~~~~~~~~~~~~~~~gG~sg~~~~p~~~~~i~~v~~~~~~ipvi~-- 249 (314)
T 2e6f_A 172 DIAHFDTAAAVLNEFPLVKFVTCVNSVGNGLVIDAESESVVIKPKQGFGGLGGKYILPTALANVNAFYRRCPDKLVFG-- 249 (314)
T ss_dssp CHHHHHHHHHHHHTCTTEEEEEECCCEEEEECEETTTTEESCCGGGGEEEEESGGGHHHHHHHHHHHHHHCTTSEEEE--
T ss_pred CHHHHHHHHHHHHhcCCceEEEEeCCCCccccccCCCCCcccccCcCCCccCcccccHHHHHHHHHHHHhcCCCCEEE--
Confidence 3456777788888899 99888765320 0 000 00 01234578888887765676643
Q ss_pred cCCCCCHHHHHHHHHcCCCeeecc
Q 018731 190 SDFRGDLRAVETLVHSGLDVFAHN 213 (351)
Q Consensus 190 ~~~~~~~e~l~~L~~aG~~~i~~~ 213 (351)
.++..+.+.+..+..+|.|.|.++
T Consensus 250 ~GGI~~~~da~~~l~~GAd~V~ig 273 (314)
T 2e6f_A 250 CGGVYSGEDAFLHILAGASMVQVG 273 (314)
T ss_dssp ESSCCSHHHHHHHHHHTCSSEEEC
T ss_pred ECCCCCHHHHHHHHHcCCCEEEEc
Confidence 455567777777778999999875
No 322
>1yya_A Triosephosphate isomerase; riken structural genomics/proteom initiative, RSGI, structural genomics; 1.60A {Thermus thermophilus}
Probab=48.87 E-value=58 Score=28.49 Aligned_cols=112 Identities=10% Similarity=-0.025 Sum_probs=62.8
Q ss_pred CchhHHHHHHHHHh-CCC--cEEEEeccCCCCCCCCcHHHHHHHHHHHHHhCCCcEEEEeec----CCCCC-HHHHHHHH
Q 018731 132 DPMEPENTAKAIAS-WGV--DYIVLTSVDRDDIPDGGSGHFARTVKAMKKQKPDIMVECLTS----DFRGD-LRAVETLV 203 (351)
Q Consensus 132 ~~eei~~~~~~~~~-~G~--~~I~ltgg~~~~l~~~~~~~~~~li~~ik~~~p~i~i~~~~~----~~~~~-~e~l~~L~ 203 (351)
+..+..+.++.+.. ..- -++++. |+ + .++..+.+.++. .++.+.+..- .+..+ +=-...|+
T Consensus 15 ~~~~~~~~~~~l~~~~~~~~vev~v~---Pp-~-----~~L~~v~~~~~~--~~i~vgAQn~~~~~~GA~TGEiS~~mL~ 83 (250)
T 1yya_A 15 TPSEARVWFAELKRLLPPLQSEAAVL---PA-F-----PILPVAKEVLAE--TQVGYGAQDVSAHKEGAYTGEVSARMLS 83 (250)
T ss_dssp CHHHHHHHHHHHHHHCCCCSSEEEEE---CC-G-----GGHHHHHHHHTT--SSCEEEESCCCSSSSBSCTTCCCHHHHH
T ss_pred CHHHHHHHHHHHHhhccccCceEEEe---CC-H-----HHHHHHHHHhcC--CCCeEEeccCCCCCCCCccCcCCHHHHH
Confidence 45666666666543 211 345542 32 2 245555444432 2455543221 11112 22356788
Q ss_pred HcCCCeeecchhchHHHHhhhcCCCCCHHHHHHHHHHHHHhCCCCeEEEeeeeeCCCCHHHHH
Q 018731 204 HSGLDVFAHNIETVKRLQRIVRDPRAGYEQSLEVLKHAKLSKKGLITKSSIMLGLGESDDDLK 266 (351)
Q Consensus 204 ~aG~~~i~~~ies~~~~~~~~r~~~~~~~~~l~~i~~~~~~~~Gi~v~~~~IvGlgEt~e~~~ 266 (351)
++|++.+-+|- ..+|.+- +.+-+.+-+.++.+.+ .|+. .|+-.|||.++..
T Consensus 84 d~G~~~ViiGH----SERR~~f--~Etd~~v~~Kv~~Al~--~GL~----pI~CvGE~leere 134 (250)
T 1yya_A 84 DLGCRYAIVGH----SERRRYH--GETDALVAEKAKRLLE--EGIT----PILCVGEPLEVRE 134 (250)
T ss_dssp HTTCSEEEESC----HHHHHHS--CCCHHHHHHHHHHHHH--TTCE----EEEEECCCHHHHH
T ss_pred HcCCCEEEeCc----hhhhccc--CCCHHHHHHHHHHHHH--CCCE----EEEEcCCcHHHHh
Confidence 99999988762 2233332 5677777788888888 8986 3566689988653
No 323
>3krs_A Triosephosphate isomerase; ssgcid, SBRI, emerald biostructures, university of washingto niaid, I structural genomics; 1.55A {Cryptosporidium parvum iowa II}
Probab=48.67 E-value=57 Score=28.91 Aligned_cols=57 Identities=21% Similarity=0.148 Sum_probs=40.3
Q ss_pred HHHHHHHcCCCeeecchhchHHHHhhhcCCCCCHHHHHHHHHHHHHhCCCCeEEEeeeeeCCCCHHHHH
Q 018731 198 AVETLVHSGLDVFAHNIETVKRLQRIVRDPRAGYEQSLEVLKHAKLSKKGLITKSSIMLGLGESDDDLK 266 (351)
Q Consensus 198 ~l~~L~~aG~~~i~~~ies~~~~~~~~r~~~~~~~~~l~~i~~~~~~~~Gi~v~~~~IvGlgEt~e~~~ 266 (351)
-...|+++|++.+-+|- ..+|.+- +.+-+.+-+.++.+.+ .|+. .|+..|||.++..
T Consensus 102 S~~mLkd~G~~~ViiGH----SERR~~f--~Etde~v~~Kv~~Al~--~GL~----pIlCVGEtleere 158 (271)
T 3krs_A 102 SCEMLKDMDVDCSLVGH----SERRQYY--SETDQIVNNKVKKGLE--NGLK----IVLCIGESLSERE 158 (271)
T ss_dssp CHHHHHHTTCCEEEESC----HHHHHHS--CCCHHHHHHHHHHHHH--TTCE----EEEEECCCHHHHH
T ss_pred cHHHHHHcCCCEEEECc----hhhcccc--CCCHHHHHHHHHHHHH--CCCe----EEEEeCCcHHHHH
Confidence 35678899999998762 2233332 5677777788888888 8986 3566699988654
No 324
>2a4a_A Deoxyribose-phosphate aldolase; lyase, TIM beta/alpha barrel, DEOC, DERA, structur genomics, structural genomics consortium, SGC; 1.84A {Plasmodium yoelii yoelii} SCOP: c.1.10.1
Probab=48.60 E-value=1.1e+02 Score=27.12 Aligned_cols=147 Identities=11% Similarity=0.028 Sum_probs=0.0
Q ss_pred CcCcccCCCCCCCCCCchhHHHHHHHHHhCCCcEEEEeccCCCCCCCCcHH---HHHHHHHHHHHhCCCcEEEEeecCCC
Q 018731 117 CRFCAVKTSRNPAPPDPMEPENTAKAIASWGVDYIVLTSVDRDDIPDGGSG---HFARTVKAMKKQKPDIMVECLTSDFR 193 (351)
Q Consensus 117 C~FC~~~~~~~~~~~~~eei~~~~~~~~~~G~~~I~ltgg~~~~l~~~~~~---~~~~li~~ik~~~p~i~i~~~~~~~~ 193 (351)
|.-+.||.+. .+.+....+++.+.+.|.++|-+. .+...+.+++.+ .+.+-++.+++...+..+.+.--...
T Consensus 93 ~tVigFP~G~----~~~~~Kv~E~~~Av~~GAdEIDmV-inig~lksg~~~~~~~v~~eI~~v~~a~~~~~lKVIlEt~~ 167 (281)
T 2a4a_A 93 ACVINFPYGT----DSMEKVLNDTEKALDDGADEIDLV-INYKKIIENTDEGLKEATKLTQSVKKLLTNKILKVIIEVGE 167 (281)
T ss_dssp EEEESTTTCC----SCHHHHHHHHHHHHHHTCSEEEEE-CCHHHHHHSHHHHHHHHHHHHHHHHTTCTTSEEEEECCHHH
T ss_pred EEEeCCCCCC----CCHHHHHHHHHHHHHcCCCEEEEe-cchHhhhCCChhHHHHHHHHHHHHHHHhcCCceEEEEeccc
Q ss_pred CCHHH-H----HHHHHcCCCeeecc--hhchHHHHhhhcCCCCCHHHHHHHHHHHHHh-------CCCCeEEEeeeeeCC
Q 018731 194 GDLRA-V----ETLVHSGLDVFAHN--IETVKRLQRIVRDPRAGYEQSLEVLKHAKLS-------KKGLITKSSIMLGLG 259 (351)
Q Consensus 194 ~~~e~-l----~~L~~aG~~~i~~~--ies~~~~~~~~r~~~~~~~~~l~~i~~~~~~-------~~Gi~v~~~~IvGlg 259 (351)
++++. + +...++|.|.|--+ ..+ .+.+.++..-..+.+++. ...+.|++.- |..
T Consensus 168 L~d~e~i~~A~~ia~eaGADfVKTSTGf~~----------~gAT~edv~lm~~~v~~~~~~~~~tg~~vgVKaaG--GIr 235 (281)
T 2a4a_A 168 LKTEDLIIKTTLAVLNGNADFIKTSTGKVQ----------INATPSSVEYIIKAIKEYIKNNPEKNNKIGLKVSG--GIS 235 (281)
T ss_dssp HCSHHHHHHHHHHHHTTTCSEEECCCSCSS----------CCCCHHHHHHHHHHHHHHHHHCGGGTTCCEEEEES--SCC
T ss_pred CCcHHHHHHHHHHHHHhCCCEEEeCCCCCC----------CCCCHHHHHHHHHHHHHhhcccccCCCCceEEEeC--CCC
Q ss_pred CCHHHHHHHHHHHHh-CCCCEEe
Q 018731 260 ESDDDLKEAMADLRS-IDVDILT 281 (351)
Q Consensus 260 Et~e~~~~~l~~l~~-lg~d~i~ 281 (351)
|.++..+.++...+ +|.+++.
T Consensus 236 -t~e~al~~i~aga~~lG~~w~~ 257 (281)
T 2a4a_A 236 -DLNTASHYILLARRFLSSLACH 257 (281)
T ss_dssp -SHHHHHHHHHHHHHHTC-----
T ss_pred -CHHHHHHHHHHhhhhccccccc
No 325
>3bdk_A D-mannonate dehydratase; xylose isomerase-like TIM barrel, lyase; HET: DNO; 2.50A {Streptococcus suis} PDB: 3ban_A* 3dbn_A* 3fvm_A
Probab=48.40 E-value=15 Score=34.45 Aligned_cols=83 Identities=16% Similarity=0.202 Sum_probs=53.1
Q ss_pred CHHHHHHHHHc-CCCeeecchhchHHHHhhhcCCCCCHHHHHHHHHHHHHhCCCCeEEEe--------eeeeCC---CCH
Q 018731 195 DLRAVETLVHS-GLDVFAHNIETVKRLQRIVRDPRAGYEQSLEVLKHAKLSKKGLITKSS--------IMLGLG---ESD 262 (351)
Q Consensus 195 ~~e~l~~L~~a-G~~~i~~~ies~~~~~~~~r~~~~~~~~~l~~i~~~~~~~~Gi~v~~~--------~IvGlg---Et~ 262 (351)
+++.++.++++ |++.|-+++.-.. .+...+.++..+.-+.+.+ .|+.+.+. +..|.. +..
T Consensus 32 d~~~L~~i~q~~G~~gIe~~l~~~~------~g~~w~~~~i~~lk~~l~~--~GL~i~~i~s~~~~~~i~~~~~~r~~~i 103 (386)
T 3bdk_A 32 DPVTLEEIKAIPGMQGIVTAVYDVP------VGQAWPLENILELKKMVEE--AGLEITVIESIPVHEDIKQGKPNRDALI 103 (386)
T ss_dssp CSSCHHHHHTSTTCCEEEECCCSSC------SSSCCCHHHHHHHHHHHHT--TTCEEEEEECCCCCHHHHTTCTTHHHHH
T ss_pred CHHHHHHHHhcCCCCEEEeCCcccC------CCCCCCHHHHHHHHHHHHH--cCCEEEEEeccccccccccCcHHHHHHH
Confidence 56789999999 9999866542111 0012355666666666677 89986542 222211 223
Q ss_pred HHHHHHHHHHHhCCCCEEeeeccc
Q 018731 263 DDLKEAMADLRSIDVDILTLGQYL 286 (351)
Q Consensus 263 e~~~~~l~~l~~lg~d~i~i~~~l 286 (351)
+.+.++++.+.++|+..|.. +|+
T Consensus 104 e~~k~~i~~aa~lGi~~v~~-nf~ 126 (386)
T 3bdk_A 104 ENYKTSIRNVGAAGIPVVCY-NFM 126 (386)
T ss_dssp HHHHHHHHHHHTTTCCEEEE-CCC
T ss_pred HHHHHHHHHHHHcCCCEEEE-cCc
Confidence 67788899999999998866 454
No 326
>2rfg_A Dihydrodipicolinate synthase; beta barrel, amino-acid biosynthesis, diaminopimelate biosyn lyase, lysine biosynthesis, schiff base; 1.50A {Hahella chejuensis}
Probab=48.35 E-value=17 Score=32.66 Aligned_cols=78 Identities=13% Similarity=0.084 Sum_probs=48.5
Q ss_pred CCchhHHHHHHHHHhCCCcEEEEec--cCCCCCCCCcHHHHHHHHHHHHHhCC-CcEEEEeecCCCCCH---HHHHHHHH
Q 018731 131 PDPMEPENTAKAIASWGVDYIVLTS--VDRDDIPDGGSGHFARTVKAMKKQKP-DIMVECLTSDFRGDL---RAVETLVH 204 (351)
Q Consensus 131 ~~~eei~~~~~~~~~~G~~~I~ltg--g~~~~l~~~~~~~~~~li~~ik~~~p-~i~i~~~~~~~~~~~---e~l~~L~~ 204 (351)
.+.+...+.++.+.+.|++.+++.| |+...|. .+.-.++++.+.+... .+.|-+-+. ...+. +..+...+
T Consensus 18 iD~~~l~~lv~~li~~Gv~gi~v~GttGE~~~Ls---~~Er~~v~~~~~~~~~grvpviaGvg-~~~t~~ai~la~~A~~ 93 (297)
T 2rfg_A 18 VDEKALAGLVDWQIKHGAHGLVPVGTTGESPTLT---EEEHKRVVALVAEQAQGRVPVIAGAG-SNNPVEAVRYAQHAQQ 93 (297)
T ss_dssp ECHHHHHHHHHHHHHTTCSEEECSSGGGTGGGSC---HHHHHHHHHHHHHHHTTSSCBEEECC-CSSHHHHHHHHHHHHH
T ss_pred cCHHHHHHHHHHHHHcCCCEEEECccccchhhCC---HHHHHHHHHHHHHHhCCCCeEEEccC-CCCHHHHHHHHHHHHh
Confidence 5667788899999999999998865 4544455 3555666666655422 233322221 11233 45566677
Q ss_pred cCCCeeec
Q 018731 205 SGLDVFAH 212 (351)
Q Consensus 205 aG~~~i~~ 212 (351)
+|.|.+.+
T Consensus 94 ~Gadavlv 101 (297)
T 2rfg_A 94 AGADAVLC 101 (297)
T ss_dssp HTCSEEEE
T ss_pred cCCCEEEE
Confidence 89998865
No 327
>1ney_A TIM, triosephosphate isomerase; yeast, DHAP, dihydroxyacetone phosphate, michaelis complex; HET: FTR 13P; 1.20A {Saccharomyces cerevisiae} SCOP: c.1.1.1 PDB: 1nf0_A* 1i45_A* 1ypi_A 2ypi_A 7tim_A* 3ypi_A*
Probab=48.33 E-value=60 Score=28.37 Aligned_cols=56 Identities=16% Similarity=0.146 Sum_probs=39.7
Q ss_pred HHHHHHHcCCCeeecchhchHHHHhhhcCCCCCHHHHHHHHHHHHHhCCCCeEEEeeeeeCCCCHHHH
Q 018731 198 AVETLVHSGLDVFAHNIETVKRLQRIVRDPRAGYEQSLEVLKHAKLSKKGLITKSSIMLGLGESDDDL 265 (351)
Q Consensus 198 ~l~~L~~aG~~~i~~~ies~~~~~~~~r~~~~~~~~~l~~i~~~~~~~~Gi~v~~~~IvGlgEt~e~~ 265 (351)
-...|+++|++.+-+|- ..+|.+- +.+-+.+-+.++.+.+ .|+. .|+-.|||.++.
T Consensus 78 S~~mL~d~G~~~ViiGH----SERR~~f--~Etd~~v~~Kv~~Al~--~GL~----pI~CvGEtleer 133 (247)
T 1ney_A 78 SVDQIKDVGAKYVILGH----SERRSYF--HEDDKFIADKTKFALG--QGVG----VILCIGETLEEK 133 (247)
T ss_dssp CHHHHHHTTCCEEEESC----HHHHHTT--CCCHHHHHHHHHHHHH--TTCE----EEEEECCCHHHH
T ss_pred CHHHHHHcCCCEEEECC----hhhcccc--CCCHHHHHHHHHHHHH--CCCE----EEEEcCCcHHHH
Confidence 35678899999987762 2233332 4677777788888888 8986 356568998876
No 328
>2iw0_A Chitin deacetylase; hydrolase, chitin DE-N-acetylase, family 4 carbohydrate ESTE; 1.81A {Colletotrichum lindemuthianum} SCOP: c.6.2.3
Probab=48.20 E-value=42 Score=29.15 Aligned_cols=140 Identities=14% Similarity=0.151 Sum_probs=73.8
Q ss_pred HHHHHHHhCCCcEEEEeccCCCCCCCCcHH----HHHHHHHHHHHhCCCcEEEEe-ecCCCCCHHHHHHHHHcCCCeeec
Q 018731 138 NTAKAIASWGVDYIVLTSVDRDDIPDGGSG----HFARTVKAMKKQKPDIMVECL-TSDFRGDLRAVETLVHSGLDVFAH 212 (351)
Q Consensus 138 ~~~~~~~~~G~~~I~ltgg~~~~l~~~~~~----~~~~li~~ik~~~p~i~i~~~-~~~~~~~~e~l~~L~~aG~~~i~~ 212 (351)
+.++++.+.| .+|-.=+-....+.....+ .+.+.-+.|.+.. +.....+ .|.+..++..++.+++.|...+..
T Consensus 89 ~~lr~i~~~G-heIg~Ht~~H~~l~~ls~~~~~~ei~~~~~~l~~~~-G~~~~~fr~P~G~~~~~~~~~l~~~G~~~v~w 166 (254)
T 2iw0_A 89 DTIRRMRADG-HLVGSHTYAHPDLNTLSSADRISQMRQLEEATRRID-GFAPKYMRAPYLSCDAGCQGDLGGLGYHIIDT 166 (254)
T ss_dssp HHHHHHHHTT-CEEEECCSSCCCGGGSCHHHHHHHHHHHHHHHHHHH-SCEESEECCGGGCCCHHHHHHHHHTTCEEECC
T ss_pred HHHHHHHHCC-CEEEeeccCCCCcccCCHHHHHHHHHHHHHHHHHHh-CCCCCEEECCCCCCCHHHHHHHHHcCCeEEEe
Confidence 4555666777 3454433332233222222 3333344444432 4444333 355556899999999999988877
Q ss_pred chhchHHHHhhhcCCCCCHHHHHHHHHHHHHhCCCCe-EEEeeeeeC-C--CCHHH-HHHHHHHHHhCCCCEEeeeccc
Q 018731 213 NIETVKRLQRIVRDPRAGYEQSLEVLKHAKLSKKGLI-TKSSIMLGL-G--ESDDD-LKEAMADLRSIDVDILTLGQYL 286 (351)
Q Consensus 213 ~ies~~~~~~~~r~~~~~~~~~l~~i~~~~~~~~Gi~-v~~~~IvGl-g--Et~e~-~~~~l~~l~~lg~d~i~i~~~l 286 (351)
++++.+-.. . ........++.++.+.+ ... -...+|+-+ + .|.+. +...++.+++.|...+++...+
T Consensus 167 ~~d~~Dw~~---~-~~~~i~~~~~~~~~~~~---~~~~~~g~IiL~Hd~~~~t~~~~l~~ii~~lk~~Gy~fvtl~ell 238 (254)
T 2iw0_A 167 NLDTKDYEN---N-KPETTHLSAEKFNNELS---ADVGANSYIVLSHDVHEQTVVSLTQKLIDTLKSKGYRAVTVGECL 238 (254)
T ss_dssp SEECCTTTS---C-STTTHHHHHHHHHHHSC---SCGGGCCEEEEECTTSHHHHHTHHHHHHHHHHHTTCEECCHHHHT
T ss_pred CCCCcccCc---C-ChHHHHHHHHHHHHHHh---hcCCCCCEEEEEcCCCcccHHHHHHHHHHHHHHCCCEEEEHHHhh
Confidence 777754321 1 11223333343433211 110 012344434 2 24443 5778999999999988886555
No 329
>3s83_A Ggdef family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, signaling protein; HET: MSE; 1.34A {Caulobacter crescentus} PDB: 3u2e_A
Probab=48.20 E-value=1.2e+02 Score=25.82 Aligned_cols=98 Identities=16% Similarity=0.158 Sum_probs=58.7
Q ss_pred HHHHHHHHHHHHHhCCCcEEEEeecCCCCCHHHHHHHHHcCCCeeecchhchHHHHhhhcCCCCCHHHHHHH-HHHHHHh
Q 018731 166 SGHFARTVKAMKKQKPDIMVECLTSDFRGDLRAVETLVHSGLDVFAHNIETVKRLQRIVRDPRAGYEQSLEV-LKHAKLS 244 (351)
Q Consensus 166 ~~~~~~li~~ik~~~p~i~i~~~~~~~~~~~e~l~~L~~aG~~~i~~~ies~~~~~~~~r~~~~~~~~~l~~-i~~~~~~ 244 (351)
.+.+.+.++.+++. |+.+.+ .++-.....+..|.+..+|.|-+.-. +.+.+. ........++. ++.+++
T Consensus 138 ~~~~~~~l~~l~~~--G~~ial--DdfG~g~ssl~~L~~l~~d~iKiD~~----~v~~~~-~~~~~~~~~~~i~~~a~~- 207 (259)
T 3s83_A 138 PERAAVILKTLRDA--GAGLAL--DDFGTGFSSLSYLTRLPFDTLKIDRY----FVRTMG-NNAGSAKIVRSVVKLGQD- 207 (259)
T ss_dssp HHHHHHHHHHHHHH--TCEEEE--ECC---CHHHHHHHHSCCCEEEECHH----HHHHTT-TCHHHHHHHHHHHHHHHH-
T ss_pred HHHHHHHHHHHHHC--CCEEEE--ECCCCCchhHHHHHhCCCCEEEECHH----HHhhhh-cCchHHHHHHHHHHHHHH-
Confidence 36778888899987 677654 34433446788899999998876421 111121 12223334444 455666
Q ss_pred CCCCeEEEeeeeeCCCCHHHHHHHHHHHHhCCCCEEee
Q 018731 245 KKGLITKSSIMLGLGESDDDLKEAMADLRSIDVDILTL 282 (351)
Q Consensus 245 ~~Gi~v~~~~IvGlgEt~e~~~~~l~~l~~lg~d~i~i 282 (351)
.|+.+-+. | -||.+++ +.++++|++.+.=
T Consensus 208 -~g~~viae---G-VEt~~~~----~~l~~lG~~~~QG 236 (259)
T 3s83_A 208 -LDLEVVAE---G-VENAEMA----HALQSLGCDYGQG 236 (259)
T ss_dssp -TTCEEEEC---C-CCSHHHH----HHHHHHTCCEECB
T ss_pred -CCCeEEEE---e-CCCHHHH----HHHHhcCCCEeec
Confidence 78764222 2 3777654 6778999998765
No 330
>3l0g_A Nicotinate-nucleotide pyrophosphorylase; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ALS collaborative crystallography; 2.05A {Ehrlichia chaffeensis}
Probab=48.19 E-value=88 Score=28.15 Aligned_cols=86 Identities=9% Similarity=0.186 Sum_probs=53.5
Q ss_pred HHHHHHHHHHhCCCcEEEEeecCCCCCHHHHHHHHHcCCCeeecchhchHHHHhhhcCCCCCHHHHHHHHHHHHHhCCCC
Q 018731 169 FARTVKAMKKQKPDIMVECLTSDFRGDLRAVETLVHSGLDVFAHNIETVKRLQRIVRDPRAGYEQSLEVLKHAKLSKKGL 248 (351)
Q Consensus 169 ~~~li~~ik~~~p~i~i~~~~~~~~~~~e~l~~L~~aG~~~i~~~ies~~~~~~~~r~~~~~~~~~l~~i~~~~~~~~Gi 248 (351)
+.+.++.+++..|...|++... +.+.++...++|.|.|.+. ..+.++..++++.++. .+
T Consensus 194 i~~Av~~ar~~~p~~kIeVEv~----tl~e~~eAl~aGaDiImLD--------------n~s~~~l~~av~~~~~---~v 252 (300)
T 3l0g_A 194 ITLAIQRLRKNLKNEYIAIECD----NISQVEESLSNNVDMILLD--------------NMSISEIKKAVDIVNG---KS 252 (300)
T ss_dssp HHHHHHHHHHHSSSCCEEEEES----SHHHHHHHHHTTCSEEEEE--------------SCCHHHHHHHHHHHTT---SS
T ss_pred HHHHHHHHHHhCCCCCEEEEEC----CHHHHHHHHHcCCCEEEEC--------------CCCHHHHHHHHHhhcC---ce
Confidence 4466777777777766665442 5578888888999988542 2456666666666542 33
Q ss_pred eEEEeeeeeCCCCHHHHHHHHHHHHhCCCCEEeee
Q 018731 249 ITKSSIMLGLGESDDDLKEAMADLRSIDVDILTLG 283 (351)
Q Consensus 249 ~v~~~~IvGlgEt~e~~~~~l~~l~~lg~d~i~i~ 283 (351)
.+.+ -| |-|.+.+ ..+.+.|+|.++++
T Consensus 253 ~lea---SG-GIt~~~i----~~~A~tGVD~IsvG 279 (300)
T 3l0g_A 253 VLEV---SG-CVNIRNV----RNIALTGVDYISIG 279 (300)
T ss_dssp EEEE---ES-SCCTTTH----HHHHTTTCSEEECG
T ss_pred EEEE---EC-CCCHHHH----HHHHHcCCCEEEeC
Confidence 3221 12 3344444 33467999999996
No 331
>1vpx_A Protein (transaldolase (EC 2.2.1.2)); TM0295, structural genomics, JOI for structural genomics, JCSG; HET: GOL; 2.40A {Thermotoga maritima} SCOP: c.1.10.1
Probab=48.10 E-value=41 Score=29.09 Aligned_cols=118 Identities=15% Similarity=0.249 Sum_probs=0.0
Q ss_pred HHHHHHHHhCCC-cEEEEeccCCCCCCCCcHHHHHHHHHHHHHhCCC-cEEEEeecCCCCCHHHHHHHHHcCCCeeecch
Q 018731 137 ENTAKAIASWGV-DYIVLTSVDRDDIPDGGSGHFARTVKAMKKQKPD-IMVECLTSDFRGDLRAVETLVHSGLDVFAHNI 214 (351)
Q Consensus 137 ~~~~~~~~~~G~-~~I~ltgg~~~~l~~~~~~~~~~li~~ik~~~p~-i~i~~~~~~~~~~~e~l~~L~~aG~~~i~~~i 214 (351)
.++++++.+.|. ..+. -+|..+...+ ..+.+.++.|.+..+| +.+++...+....-+..+.|.+.. ..+.+-+
T Consensus 22 ~~ei~~~~~~g~i~GvT---TNPsi~~k~g-~~~~~~i~ei~~iv~G~VS~EV~a~d~e~mi~eA~~L~~~~-~nv~IKI 96 (230)
T 1vpx_A 22 LEEIKKGVEWGIVDGVT---TNPTLISKEG-AEFKQRVKEICDLVKGPVSAEVVSLDYEGMVREARELAQIS-EYVVIKI 96 (230)
T ss_dssp HHHHHHHHHTTCCCEEE---CCC------------CHHHHHHHHHCSCEEEECSCCSHHHHHHHHHHHHTTC-TTEEEEE
T ss_pred HHHHHHHHhcCCcCCCc---cCHHHHHhcC-CCHHHHHHHHHhccCCcEEEEEccCCHHHHHHHHHHHHHhC-CCEEEEe
Q ss_pred hchHHHHhhhcCCCCCHHHHHHHHHHHHHhCCCCeEEEeeeeeCCCCHHHHHHHHHHHHhCCCCEEeee
Q 018731 215 ETVKRLQRIVRDPRAGYEQSLEVLKHAKLSKKGLITKSSIMLGLGESDDDLKEAMADLRSIDVDILTLG 283 (351)
Q Consensus 215 es~~~~~~~~r~~~~~~~~~l~~i~~~~~~~~Gi~v~~~~IvGlgEt~e~~~~~l~~l~~lg~d~i~i~ 283 (351)
..+++- +++++.+.+ .||.++.++++.+.+ .....+.|++.++.|
T Consensus 97 -------------P~T~eG-l~Ai~~L~~--eGI~vNvTliFS~~Q--------A~laa~AGa~~iSpF 141 (230)
T 1vpx_A 97 -------------PMTPDG-IKAVKTLSA--EGIKTNVTLVFSPAQ--------AILAAKAGATYVSPF 141 (230)
T ss_dssp -------------ESSHHH-HHHHHHHHH--TTCCEEEEEECSHHH--------HHHHHHHTCSEEEEB
T ss_pred -------------CCCHHH-HHHHHHHHH--CCCCEEEEEeCCHHH--------HHHHHhCCCeEEEec
No 332
>3qst_A Triosephosphate isomerase, putative; TIM barrel; 1.75A {Trichomonas vaginalis} PDB: 3qsr_A
Probab=47.87 E-value=54 Score=28.79 Aligned_cols=111 Identities=14% Similarity=0.062 Sum_probs=63.3
Q ss_pred CCchhHHHHHHHHHhCCC---cEEEEeccCCCCCCCCcHHHHHHHHHHHHHhCCCcEEEEee----cCCCCC-HHHHHHH
Q 018731 131 PDPMEPENTAKAIASWGV---DYIVLTSVDRDDIPDGGSGHFARTVKAMKKQKPDIMVECLT----SDFRGD-LRAVETL 202 (351)
Q Consensus 131 ~~~eei~~~~~~~~~~G~---~~I~ltgg~~~~l~~~~~~~~~~li~~ik~~~p~i~i~~~~----~~~~~~-~e~l~~L 202 (351)
.+.++..+.++.+..... -++++. |+ +. ++..+.+.++ .++.+.+.. ..+..+ +=-...|
T Consensus 18 ~~~~~~~~l~~~l~~~~~~~~~ev~v~---Pp-~~-----~L~~v~~~~~---~~i~vgAQn~~~~~~GA~TGEiS~~mL 85 (255)
T 3qst_A 18 KTVQEAEKLVEMLNGAKVEGNVEVVVA---AP-FV-----FLPTLQQKLR---KDWKVSAENVFTKPNGAFTGEVTVPMI 85 (255)
T ss_dssp SSHHHHHHHHHHHHTCCCCSSCEEEEE---CC-GG-----GHHHHHHHSC---TTSEEEESCCCSSSSSSCTTCCCHHHH
T ss_pred CCHHHHHHHHHHHHhhcccCCceEEEe---CC-HH-----HHHHHHHHhc---cCCeEEecccCCCCCCCccCccCHHHH
Confidence 345677777777664311 245442 32 22 3444444433 245665422 111112 2245678
Q ss_pred HHcCCCeeecchhchHHHHhhhcCCCCCHHHHHHHHHHHHHhCCCCeEEEeeeeeCCCCHHHH
Q 018731 203 VHSGLDVFAHNIETVKRLQRIVRDPRAGYEQSLEVLKHAKLSKKGLITKSSIMLGLGESDDDL 265 (351)
Q Consensus 203 ~~aG~~~i~~~ies~~~~~~~~r~~~~~~~~~l~~i~~~~~~~~Gi~v~~~~IvGlgEt~e~~ 265 (351)
+++|++.+-+|- ..+|.+- +.+-+.+-+.++.+.+ .|+. .|+..|||.++.
T Consensus 86 ~d~G~~~ViiGH----SERR~~f--~Etd~~v~~Kv~~Al~--~GL~----pIlCvGEtleer 136 (255)
T 3qst_A 86 KSFGIEWTILGH----SERRDIL--KEDDEFLAAKAKFALE--NGMK----IIYCCGEHLSER 136 (255)
T ss_dssp HTTTCCEEEESC----HHHHHTS--CCCHHHHHHHHHHHHH--TTCE----EEEEECCCHHHH
T ss_pred HHcCCCEEEECc----hhhhhhc--CCCHHHHHHHHHHHHH--CCCe----EEEEcCCcHHHH
Confidence 899999998762 2233332 5577777777888888 8986 356669998876
No 333
>1pv8_A Delta-aminolevulinic acid dehydratase; porphobilinogen synthase, tetrapyrrole biosynthesis, reactio intermediate, lyase; HET: PB1; 2.20A {Homo sapiens} SCOP: c.1.10.3 PDB: 1e51_A* 2z0i_A 2z1b_A
Probab=47.81 E-value=41 Score=30.56 Aligned_cols=60 Identities=13% Similarity=0.221 Sum_probs=41.4
Q ss_pred CCCCCCCCchhHHHHHHHHHhCCCcEEEEeccCCCCC-CC-C------cHHHHHHHHHHHHHhCCCcEE
Q 018731 125 SRNPAPPDPMEPENTAKAIASWGVDYIVLTSVDRDDI-PD-G------GSGHFARTVKAMKKQKPDIMV 185 (351)
Q Consensus 125 ~~~~~~~~~eei~~~~~~~~~~G~~~I~ltgg~~~~l-~~-~------~~~~~~~li~~ik~~~p~i~i 185 (351)
..+..+.+.+.+.++++.+.+.|++.|.|-|.. ... .+ . .-.-+.+.++.||+.+|++.|
T Consensus 50 MPGv~r~sid~l~~~~~~~~~~Gi~~v~LFgvp-~~~~Kd~~gs~A~~~~g~v~~air~iK~~~pdl~v 117 (330)
T 1pv8_A 50 LPGVARYGVKRLEEMLRPLVEEGLRCVLIFGVP-SRVPKDERGSAADSEESPAIEAIHLLRKTFPNLLV 117 (330)
T ss_dssp STTCEEECHHHHHHHHHHHHHHTCCEEEEEECC---------------CCSHHHHHHHHHHHHSTTSEE
T ss_pred CCCceeecHHHHHHHHHHHHHCCCCEEEEecCC-cccCCCccccccCCCCChHHHHHHHHHHHCCCeEE
Confidence 334445667889999999999999999887763 221 11 0 012567899999999999654
No 334
>1mo0_A TIM, triosephosphate isomerase; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics; 1.70A {Caenorhabditis elegans} SCOP: c.1.1.1
Probab=47.76 E-value=60 Score=28.84 Aligned_cols=57 Identities=18% Similarity=0.149 Sum_probs=40.7
Q ss_pred HHHHHHHcCCCeeecchhchHHHHhhhcCCCCCHHHHHHHHHHHHHhCCCCeEEEeeeeeCCCCHHHHH
Q 018731 198 AVETLVHSGLDVFAHNIETVKRLQRIVRDPRAGYEQSLEVLKHAKLSKKGLITKSSIMLGLGESDDDLK 266 (351)
Q Consensus 198 ~l~~L~~aG~~~i~~~ies~~~~~~~~r~~~~~~~~~l~~i~~~~~~~~Gi~v~~~~IvGlgEt~e~~~ 266 (351)
-...|+++|++.+-+|- ..+|.+- +.+-+.+-+.++.+.+ .|+. .|+-.|||.++..
T Consensus 98 S~~mLkd~G~~~ViiGH----SERR~~f--~Etde~V~~Kv~~Al~--~GL~----pI~CvGEtleeRe 154 (275)
T 1mo0_A 98 SPAMIKDLGLEWVILGH----SERRHVF--GESDALIAEKTVHALE--AGIK----VVFCIGEKLEERE 154 (275)
T ss_dssp CHHHHHHTTCCEEEESC----HHHHHTS--CCCHHHHHHHHHHHHH--TTCE----EEEEECCCHHHHH
T ss_pred CHHHHHHcCCCEEEeCc----hhhhccc--CCCHHHHHHHHHHHHH--CCCE----EEEEcCCcHHHHh
Confidence 35678899999998762 2233332 5677777788888888 8986 3566689988765
No 335
>4e4u_A Mandalate racemase/muconate lactonizing enzyme; mandelate racemase, aldolase, structural genomics, biology; 1.35A {Unidentified}
Probab=47.73 E-value=1.6e+02 Score=27.52 Aligned_cols=154 Identities=12% Similarity=0.003 Sum_probs=84.3
Q ss_pred CCchhHHHHHHHHHhCCCcEEEEeccCC------CCCCCCcHHHHHHHHHHHHHhC-CCcEEEEeecCCCCCH----HHH
Q 018731 131 PDPMEPENTAKAIASWGVDYIVLTSVDR------DDIPDGGSGHFARTVKAMKKQK-PDIMVECLTSDFRGDL----RAV 199 (351)
Q Consensus 131 ~~~eei~~~~~~~~~~G~~~I~ltgg~~------~~l~~~~~~~~~~li~~ik~~~-p~i~i~~~~~~~~~~~----e~l 199 (351)
.+++++.+.++.+.+.|++.+-+--|.+ ........+.-.+.++++++.. +++.+.+=.+.. .+. +.+
T Consensus 143 ~~~e~~~~~a~~~~~~G~~~iKlK~g~~~~~~~g~~~~~~~~~~d~~~v~avR~a~G~d~~l~vDaN~~-~~~~~A~~~~ 221 (412)
T 4e4u_A 143 DDPDLAAECAAENVKLGFTAVKFDPAGPYTAYSGHQLSLEVLDRCELFCRRVREAVGSKADLLFGTHGQ-MVPSSAIRLA 221 (412)
T ss_dssp SCHHHHHHHHHHHHHHTCSEEEECCSCCCBTTCCBCCCHHHHHHHHHHHHHHHHHHTTSSEEEECCCSC-BCHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHcCCCEEEECCCCCCccccccccchhhHHHHHHHHHHHHHHhCCCCeEEEECCCC-CCHHHHHHHH
Confidence 3578888888888889999998832211 0001001355677888888764 566655422333 243 345
Q ss_pred HHHHHcCCCeeecchhchHHHHhhhcCCCCCHHHHHHHHHHHHHhCCCCeEEEeeeeeCCCCHHHHHHHHHHHHhCCCCE
Q 018731 200 ETLVHSGLDVFAHNIETVKRLQRIVRDPRAGYEQSLEVLKHAKLSKKGLITKSSIMLGLGESDDDLKEAMADLRSIDVDI 279 (351)
Q Consensus 200 ~~L~~aG~~~i~~~ies~~~~~~~~r~~~~~~~~~l~~i~~~~~~~~Gi~v~~~~IvGlgEt~e~~~~~l~~l~~lg~d~ 279 (351)
+.|.+.|+..|- - ++ +..++ +.++.+++. .++. +-.+|+..+..+..+.+..-.+|.
T Consensus 222 ~~L~~~~i~~iE----e--P~------~~~d~----~~~~~l~~~-~~iP------Ia~dE~~~~~~~~~~~i~~~a~d~ 278 (412)
T 4e4u_A 222 KRLEKYDPLWFE----E--PV------PPGQE----EAIAQVAKH-TSIP------IATGERLTTKYEFHKLLQAGGASI 278 (412)
T ss_dssp HHHGGGCCSEEE----C--CS------CSSCH----HHHHHHHHT-CSSC------EEECTTCCHHHHHHHHHHTTCCSE
T ss_pred HHhhhcCCcEEE----C--CC------ChhhH----HHHHHHHhh-CCCC------EEecCccCCHHHHHHHHHcCCCCE
Confidence 667777877662 1 11 12233 334445441 2333 223566555555555555556777
Q ss_pred EeeecccCCCCCcccccCCCCHHHHHHHHHHHHhcCccee
Q 018731 280 LTLGQYLQPTPLHLTVKEYVTPEKFDFWKAYGESIGFRYV 319 (351)
Q Consensus 280 i~i~~~l~PTp~~~~~~~~v~~~e~~~~~~~~~~~G~~~~ 319 (351)
+.+- ++... ...+..++.++++..|....
T Consensus 279 v~~d----~~~~G-------Git~~~kia~~A~~~gi~v~ 307 (412)
T 4e4u_A 279 LQLN----VARVG-------GLLEAKKIATLAEVHYAQIA 307 (412)
T ss_dssp ECCC----TTTTT-------SHHHHHHHHHHHHHTTCEEC
T ss_pred EEeC----ccccC-------CHHHHHHHHHHHHHcCCEEE
Confidence 6662 22111 23456777777887777643
No 336
>2qiw_A PEP phosphonomutase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: P6G; 1.80A {Corynebacterium glutamicum atcc 13032}
Probab=47.72 E-value=1e+02 Score=26.89 Aligned_cols=83 Identities=12% Similarity=0.142 Sum_probs=60.8
Q ss_pred CHHHHHHHHHcCCCeeecchhchHHHHhhhcCC-CCCHHHHHHHHHHHHHhCCCCeEEEeeeeeCCCCHHHHHHHHHHHH
Q 018731 195 DLRAVETLVHSGLDVFAHNIETVKRLQRIVRDP-RAGYEQSLEVLKHAKLSKKGLITKSSIMLGLGESDDDLKEAMADLR 273 (351)
Q Consensus 195 ~~e~l~~L~~aG~~~i~~~ies~~~~~~~~r~~-~~~~~~~l~~i~~~~~~~~Gi~v~~~~IvGlgEt~e~~~~~l~~l~ 273 (351)
|.-....+.++|++.+..+=.++...+ ...+. ..++++.+..++.+.+. ..+.+.+|+-.|+|.+. .++...+.
T Consensus 29 D~~sA~~~~~aG~dai~vg~~s~a~~~-G~pD~~~vt~~em~~~~~~I~r~-~~~pviaD~~~Gyg~~~---~~~~~~l~ 103 (255)
T 2qiw_A 29 DTWSAGLVEEAGFSGLTIGSHPVADAT-GSSDGENMNFADYMAVVKKITSA-VSIPVSVDVESGYGLSP---ADLIAQIL 103 (255)
T ss_dssp SHHHHHHHHHTTCSCEEECHHHHHHHT-TCCTTTCSCHHHHHHHHHHHHHH-CSSCEEEECTTCTTCCH---HHHHHHHH
T ss_pred CHHHHHHHHHcCCCEEEEChHHHHHhC-CCCCCCCcCHHHHHHHHHHHHhc-CCCCEEeccCCCcCcHH---HHHHHHHH
Confidence 667888889999999988743333221 11111 35899999999888753 45779999999998877 66667776
Q ss_pred hCCCCEEee
Q 018731 274 SIDVDILTL 282 (351)
Q Consensus 274 ~lg~d~i~i 282 (351)
+.|+.-+.+
T Consensus 104 ~aGa~gv~i 112 (255)
T 2qiw_A 104 EAGAVGINV 112 (255)
T ss_dssp HTTCCEEEE
T ss_pred HcCCcEEEE
Confidence 799998887
No 337
>3nvt_A 3-deoxy-D-arabino-heptulosonate 7-phosphate synth; bifunctional 3-deoxy-7-phosphoheptulonate synthase/chorismat listeria monocytogenes EGD-E; 1.95A {Listeria monocytogenes} PDB: 3tfc_A*
Probab=47.66 E-value=71 Score=29.84 Aligned_cols=63 Identities=16% Similarity=0.364 Sum_probs=48.0
Q ss_pred eeeeeC--CCCHHHHHHHHHHHHhCCCCEEeeecccCC-C-CCcccccCCCCHHHHHHHHHHHHhcCccee
Q 018731 253 SIMLGL--GESDDDLKEAMADLRSIDVDILTLGQYLQP-T-PLHLTVKEYVTPEKFDFWKAYGESIGFRYV 319 (351)
Q Consensus 253 ~~IvGl--gEt~e~~~~~l~~l~~lg~d~i~i~~~l~P-T-p~~~~~~~~v~~~e~~~~~~~~~~~G~~~~ 319 (351)
.+|+|. .++.+...++++.+++.|++.+.+..| .| | |..+ ..+..+.+..+.+++++.|....
T Consensus 144 ~~Iigpcsves~e~a~~~a~~~k~aGa~~vk~q~f-kprts~~~f---~gl~~egl~~L~~~~~~~Gl~~~ 210 (385)
T 3nvt_A 144 VFVFGPCSVESYEQVAAVAESIKAKGLKLIRGGAF-KPRTSPYDF---QGLGLEGLKILKRVSDEYGLGVI 210 (385)
T ss_dssp EEEEECSBCCCHHHHHHHHHHHHHTTCCEEECBSS-CCCSSTTSC---CCCTHHHHHHHHHHHHHHTCEEE
T ss_pred EEEEEeCCcCCHHHHHHHHHHHHHcCCCeEEcccc-cCCCChHhh---cCCCHHHHHHHHHHHHHcCCEEE
Confidence 467777 689999999999999999999888544 56 3 3322 23556778888899999998764
No 338
>1f6k_A N-acetylneuraminate lyase; beta barrel; 1.60A {Haemophilus influenzae} SCOP: c.1.10.1 PDB: 1f5z_A 1f6p_A 1f73_A* 1f74_A* 1f7b_A*
Probab=47.63 E-value=30 Score=30.95 Aligned_cols=79 Identities=8% Similarity=-0.021 Sum_probs=50.4
Q ss_pred CCCchhHHHHHHHHHh-CCCcEEEEec--cCCCCCCCCcHHHHHHHHHHHHHhCC-CcEEEEeecCCCCCH---HHHHHH
Q 018731 130 PPDPMEPENTAKAIAS-WGVDYIVLTS--VDRDDIPDGGSGHFARTVKAMKKQKP-DIMVECLTSDFRGDL---RAVETL 202 (351)
Q Consensus 130 ~~~~eei~~~~~~~~~-~G~~~I~ltg--g~~~~l~~~~~~~~~~li~~ik~~~p-~i~i~~~~~~~~~~~---e~l~~L 202 (351)
..+.+...+.++.+.+ .|++.+++.| |+...|. .+.-.++++.+.+... .+.|-+-+. ...+. +..+..
T Consensus 20 ~iD~~~l~~lv~~li~~~Gv~gl~~~GttGE~~~Ls---~~Er~~v~~~~~~~~~grvpviaGvg-~~~t~~ai~la~~a 95 (293)
T 1f6k_A 20 TINEKGLRQIIRHNIDKMKVDGLYVGGSTGENFMLS---TEEKKEIFRIAKDEAKDQIALIAQVG-SVNLKEAVELGKYA 95 (293)
T ss_dssp CBCHHHHHHHHHHHHHTSCCSEEEESSGGGTGGGSC---HHHHHHHHHHHHHHHTTSSEEEEECC-CSCHHHHHHHHHHH
T ss_pred CcCHHHHHHHHHHHHhhCCCcEEEeCccccchhhCC---HHHHHHHHHHHHHHhCCCCeEEEecC-CCCHHHHHHHHHHH
Confidence 4567778899999999 9999998865 4544455 3556667776665422 355433222 11234 455556
Q ss_pred HHcCCCeeec
Q 018731 203 VHSGLDVFAH 212 (351)
Q Consensus 203 ~~aG~~~i~~ 212 (351)
.++|.|.+.+
T Consensus 96 ~~~Gadavlv 105 (293)
T 1f6k_A 96 TELGYDCLSA 105 (293)
T ss_dssp HHHTCSEEEE
T ss_pred HhcCCCEEEE
Confidence 7789998854
No 339
>3vav_A 3-methyl-2-oxobutanoate hydroxymethyltransferase; structural genomics, seattle structural genomics center for infectious disease; 1.80A {Burkholderia thailandensis} SCOP: c.1.12.8 PDB: 3ez4_A
Probab=47.61 E-value=1.5e+02 Score=26.25 Aligned_cols=15 Identities=7% Similarity=0.113 Sum_probs=7.4
Q ss_pred HHHHHHHHHHHHHhC
Q 018731 166 SGHFARTVKAMKKQK 180 (351)
Q Consensus 166 ~~~~~~li~~ik~~~ 180 (351)
++.+..-++.+.+-.
T Consensus 74 ldem~~h~~aV~r~~ 88 (275)
T 3vav_A 74 LDDIAYHTACVARAQ 88 (275)
T ss_dssp HHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHhcC
Confidence 445555555555443
No 340
>4e5t_A Mandelate racemase / muconate lactonizing enzyme, terminal domain protein; aldolase, structural genomics, biology; 2.90A {Labrenzia alexandrii}
Probab=47.30 E-value=1.4e+02 Score=27.69 Aligned_cols=154 Identities=12% Similarity=-0.036 Sum_probs=82.9
Q ss_pred CCchhHHHHHHHHHhCCCcEEEEe-ccCCC----CC-CCCcHHHHHHHHHHHHHhC-CCcEEEEeecCCCCCH----HHH
Q 018731 131 PDPMEPENTAKAIASWGVDYIVLT-SVDRD----DI-PDGGSGHFARTVKAMKKQK-PDIMVECLTSDFRGDL----RAV 199 (351)
Q Consensus 131 ~~~eei~~~~~~~~~~G~~~I~lt-gg~~~----~l-~~~~~~~~~~li~~ik~~~-p~i~i~~~~~~~~~~~----e~l 199 (351)
.+++++.+.++.+.+.|++.+-+- |+... .. .....+.-.+.++++++.. +++.+.+=.+.. .+. +.+
T Consensus 150 ~~~e~~~~~a~~~~~~G~~~~KlK~g~~~~~~~g~~~~~~~~~~d~~~v~avR~a~G~d~~l~vDan~~-~~~~~A~~~~ 228 (404)
T 4e5t_A 150 NDADMAAEAAAKAVDQGFTAVKFDPAGAYTIYDGHQPSLEDLERSEAFCKQIRAAVGTKADLLFGTHGQ-FTVSGAKRLA 228 (404)
T ss_dssp TCHHHHHHHHHHHHHHTCSEEEECCSCCCBTTCSBCCCHHHHHHHHHHHHHHHHHHGGGSEEEECCCSC-BCHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHcCCCEEeeCCCCCCcccccccccHHHHHHHHHHHHHHHHHcCCCCeEEEeCCCC-cCHHHHHHHH
Confidence 357888888888888999999883 32200 01 1011355677888888875 456554322332 243 345
Q ss_pred HHHHHcCCCeeecchhchHHHHhhhcCCCCCHHHHHHHHHHHHHhCCCCeEEEeeeeeCCCCHHHHHHHHHHHHhCCCCE
Q 018731 200 ETLVHSGLDVFAHNIETVKRLQRIVRDPRAGYEQSLEVLKHAKLSKKGLITKSSIMLGLGESDDDLKEAMADLRSIDVDI 279 (351)
Q Consensus 200 ~~L~~aG~~~i~~~ies~~~~~~~~r~~~~~~~~~l~~i~~~~~~~~Gi~v~~~~IvGlgEt~e~~~~~l~~l~~lg~d~ 279 (351)
+.|.+.|++.|- - ++ +..++ +.++.+++. .++.+ -.+|+..+..+..+.+..-.+|.
T Consensus 229 ~~l~~~~i~~iE----e--P~------~~~~~----~~~~~l~~~-~~iPI------a~dE~~~~~~~~~~~i~~~a~d~ 285 (404)
T 4e5t_A 229 RRLEAYDPLWFE----E--PI------PPEKP----EDMAEVARY-TSIPV------ATGERLCTKYEFSRVLETGAASI 285 (404)
T ss_dssp HHHGGGCCSEEE----C--CS------CTTCH----HHHHHHHHH-CSSCE------EECTTCCHHHHHHHHHHHTCCSE
T ss_pred HHHhhcCCcEEE----C--CC------CcccH----HHHHHHHhh-CCCCE------EeCCCcCCHHHHHHHHHhCCCCE
Confidence 667777887762 1 11 12233 333344431 34432 23565555555555555556777
Q ss_pred EeeecccCCCCCcccccCCCCHHHHHHHHHHHHhcCccee
Q 018731 280 LTLGQYLQPTPLHLTVKEYVTPEKFDFWKAYGESIGFRYV 319 (351)
Q Consensus 280 i~i~~~l~PTp~~~~~~~~v~~~e~~~~~~~~~~~G~~~~ 319 (351)
+.+- ++... ...+..++.++++..|....
T Consensus 286 v~~d----~~~~G-------Git~~~~ia~~A~~~gi~~~ 314 (404)
T 4e5t_A 286 LQMN----LGRVG-------GLLEAKKIAAMAECHSAQIA 314 (404)
T ss_dssp ECCC----TTTSS-------CHHHHHHHHHHHHHTTCEEC
T ss_pred EecC----ccccC-------CHHHHHHHHHHHHHcCCEEe
Confidence 6652 22111 23456677777777777643
No 341
>3oa3_A Aldolase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, pathogenic fungus; 1.60A {Coccidioides immitis}
Probab=47.27 E-value=1.6e+02 Score=26.34 Aligned_cols=153 Identities=10% Similarity=0.145 Sum_probs=92.9
Q ss_pred CCchhHHHHHHHHHhCCCcEEEEeccCCCCCCCCcHHHHHHHHHHHHHhCCCcEEEEee--cCCCCC----HHHHHHHHH
Q 018731 131 PDPMEPENTAKAIASWGVDYIVLTSVDRDDIPDGGSGHFARTVKAMKKQKPDIMVECLT--SDFRGD----LRAVETLVH 204 (351)
Q Consensus 131 ~~~eei~~~~~~~~~~G~~~I~ltgg~~~~l~~~~~~~~~~li~~ik~~~p~i~i~~~~--~~~~~~----~e~l~~L~~ 204 (351)
.+.+++.+.++++.+.|+..|++. | .++....+.++. .++.|.+.. |.+..+ -...+...+
T Consensus 71 ~T~~dI~~lc~eA~~~g~aaVCV~---P--------~~V~~a~~~L~~--s~V~V~tVigFP~G~~~~~~Kv~Ea~~Ai~ 137 (288)
T 3oa3_A 71 ATGSQIDVLCAEAKEYGFATVCVR---P--------DYVSRAVQYLQG--TQVGVTCVIGFHEGTYSTDQKVSEAKRAMQ 137 (288)
T ss_dssp CCHHHHHHHHHHHHHHTCSEEEEC---G--------GGHHHHHHHTTT--SSCEEEEEESTTTSCSCHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHhcCCcEEEEC---H--------HHHHHHHHHcCC--CCCeEEEEeCCCCCCCcHHHHHHHHHHHHH
Confidence 456889999999999999999982 1 122222223322 256665433 222222 135566778
Q ss_pred cCCCeeecchhchHHHHhhhcCCCCCHHHHHHHHHHHHHhCCCCeEEEeeeeeCCCCHHHHHHHHHHHHhCCCCEEeeec
Q 018731 205 SGLDVFAHNIETVKRLQRIVRDPRAGYEQSLEVLKHAKLSKKGLITKSSIMLGLGESDDDLKEAMADLRSIDVDILTLGQ 284 (351)
Q Consensus 205 aG~~~i~~~ies~~~~~~~~r~~~~~~~~~l~~i~~~~~~~~Gi~v~~~~IvGlgEt~e~~~~~l~~l~~lg~d~i~i~~ 284 (351)
.|.|.|-+-+.-. .++ ..+++...+-|+.+++...+-.++.-+-.|+ -|++++....+...+.|+|+|--+
T Consensus 138 ~GAdEIDmVINig-----~lk--~g~~~~v~~eI~~V~~a~~~~~lKVIlEt~~-Lt~eei~~A~~ia~eaGADfVKTS- 208 (288)
T 3oa3_A 138 NGASELDMVMNYP-----WLS--EKRYTDVFQDIRAVRLAAKDAILKVILETSQ-LTADEIIAGCVLSSLAGADYVKTS- 208 (288)
T ss_dssp TTCSEEEEECCHH-----HHH--TTCHHHHHHHHHHHHHHTTTSEEEEECCGGG-CCHHHHHHHHHHHHHTTCSEEECC-
T ss_pred cCCCEEEEEeehh-----hhc--CCcHHHHHHHHHHHHHHhcCCCceEEEECCC-CCHHHHHHHHHHHHHcCCCEEEcC-
Confidence 8999986432211 122 4578888888888777543432333333343 467889899999999999998763
Q ss_pred ccCCCCCcccccCCCCHHHHHHHHHHHH
Q 018731 285 YLQPTPLHLTVKEYVTPEKFDFWKAYGE 312 (351)
Q Consensus 285 ~l~PTp~~~~~~~~v~~~e~~~~~~~~~ 312 (351)
|.+. ....+.++...+++..+
T Consensus 209 ----TGf~---~~GAT~edv~lmr~~v~ 229 (288)
T 3oa3_A 209 ----TGFN---GPGASIENVSLMSAVCD 229 (288)
T ss_dssp ----CSSS---SCCCCHHHHHHHHHHHH
T ss_pred ----CCCC---CCCCCHHHHHHHHHHHH
Confidence 3222 12356667777777664
No 342
>4dpp_A DHDPS 2, dihydrodipicolinate synthase 2, chloroplastic; amino-acid biosynthesis, (S)-lysine biosynthesis VIA DAP PAT (beta/alpha)8-barrel; 2.00A {Arabidopsis thaliana} PDB: 4dpq_A* 3tuu_A*
Probab=46.87 E-value=31 Score=31.99 Aligned_cols=79 Identities=11% Similarity=-0.010 Sum_probs=49.5
Q ss_pred CCCchhHHHHHHHHHhCCCcEEEEec--cCCCCCCCCcHHHHHHHHHHHHHhCC-CcEEEEeecCCCCCH---HHHHHHH
Q 018731 130 PPDPMEPENTAKAIASWGVDYIVLTS--VDRDDIPDGGSGHFARTVKAMKKQKP-DIMVECLTSDFRGDL---RAVETLV 203 (351)
Q Consensus 130 ~~~~eei~~~~~~~~~~G~~~I~ltg--g~~~~l~~~~~~~~~~li~~ik~~~p-~i~i~~~~~~~~~~~---e~l~~L~ 203 (351)
..+.+...+.++.+.+.|+..+++.| |+...|. .+.-.++++.+.+... .+.|-+-+. ...+. +..+...
T Consensus 76 ~ID~~al~~lv~~li~~Gv~Gl~v~GTTGE~~~Ls---~eEr~~vi~~~ve~~~grvpViaGvg-~~st~eai~la~~A~ 151 (360)
T 4dpp_A 76 RFDLEAYDDLVNIQIQNGAEGVIVGGTTGEGQLMS---WDEHIMLIGHTVNCFGGSIKVIGNTG-SNSTREAIHATEQGF 151 (360)
T ss_dssp SBCHHHHHHHHHHHHHTTCCEEEESSTTTTGGGSC---HHHHHHHHHHHHHHHTTTSEEEEECC-CSSHHHHHHHHHHHH
T ss_pred CcCHHHHHHHHHHHHHcCCCEEEecccccChhhCC---HHHHHHHHHHHHHHhCCCCeEEEecC-CCCHHHHHHHHHHHH
Confidence 35677888999999999999999965 4444455 3555666666655422 355433222 11234 4455566
Q ss_pred HcCCCeeec
Q 018731 204 HSGLDVFAH 212 (351)
Q Consensus 204 ~aG~~~i~~ 212 (351)
++|+|.+.+
T Consensus 152 ~~Gadavlv 160 (360)
T 4dpp_A 152 AVGMHAALH 160 (360)
T ss_dssp HTTCSEEEE
T ss_pred HcCCCEEEE
Confidence 789998754
No 343
>1y0e_A Putative N-acetylmannosamine-6-phosphate 2-epimer; mannac-6-P epimerase, NANE, structural genomics, protein STR initiative, PSI; 1.95A {Staphylococcus aureus subsp} SCOP: c.1.2.5
Probab=46.64 E-value=88 Score=26.09 Aligned_cols=125 Identities=13% Similarity=0.223 Sum_probs=70.4
Q ss_pred HHHHHHhCCCcEEEEeccCCCCCCCCcHHHHHHHHHHHHHhCCCcEEEEeecCCCCCHHHHHHHHHcCCCeeecchhchH
Q 018731 139 TAKAIASWGVDYIVLTSVDRDDIPDGGSGHFARTVKAMKKQKPDIMVECLTSDFRGDLRAVETLVHSGLDVFAHNIETVK 218 (351)
Q Consensus 139 ~~~~~~~~G~~~I~ltgg~~~~l~~~~~~~~~~li~~ik~~~p~i~i~~~~~~~~~~~e~l~~L~~aG~~~i~~~ies~~ 218 (351)
.++.+.+.|++.|.+...... -++ ..+.++++.+++.+|+..+-. . . .+.+.+..+.++|++.|..+.-...
T Consensus 80 ~i~~~~~~Gad~v~l~~~~~~-~p~---~~~~~~i~~~~~~~~~~~v~~-~--~-~t~~e~~~~~~~G~d~i~~~~~g~t 151 (223)
T 1y0e_A 80 EVDELIESQCEVIALDATLQQ-RPK---ETLDELVSYIRTHAPNVEIMA-D--I-ATVEEAKNAARLGFDYIGTTLHGYT 151 (223)
T ss_dssp HHHHHHHHTCSEEEEECSCSC-CSS---SCHHHHHHHHHHHCTTSEEEE-E--C-SSHHHHHHHHHTTCSEEECTTTTSS
T ss_pred HHHHHHhCCCCEEEEeeeccc-Ccc---cCHHHHHHHHHHhCCCceEEe-c--C-CCHHHHHHHHHcCCCEEEeCCCcCc
Confidence 345556789999888554311 011 246788889998877765533 1 1 2666778899999998865321111
Q ss_pred HHHhhhcCCCCCHHHHHHHHHHHHHhCCCCeEEEeeeeeCCC-CHHHHHHHHHHHHhCCCCEEeeec
Q 018731 219 RLQRIVRDPRAGYEQSLEVLKHAKLSKKGLITKSSIMLGLGE-SDDDLKEAMADLRSIDVDILTLGQ 284 (351)
Q Consensus 219 ~~~~~~r~~~~~~~~~l~~i~~~~~~~~Gi~v~~~~IvGlgE-t~e~~~~~l~~l~~lg~d~i~i~~ 284 (351)
. ..++ .......++.++.+++. .++. ++..=|= |.+++.+.+ +.|++.+.++.
T Consensus 152 ~---~~~~-~~~~~~~~~~~~~~~~~-~~ip----via~GGI~~~~~~~~~~----~~Gad~v~vG~ 205 (223)
T 1y0e_A 152 S---YTQG-QLLYQNDFQFLKDVLQS-VDAK----VIAEGNVITPDMYKRVM----DLGVHCSVVGG 205 (223)
T ss_dssp T---TSTT-CCTTHHHHHHHHHHHHH-CCSE----EEEESSCCSHHHHHHHH----HTTCSEEEECH
T ss_pred C---CCCC-CCCCcccHHHHHHHHhh-CCCC----EEEecCCCCHHHHHHHH----HcCCCEEEECh
Confidence 1 0010 11123345566666652 2443 2221144 777776554 46999888863
No 344
>1n7k_A Deoxyribose-phosphate aldolase; A.pernix, tetramer, alpha-beta TIM barrel, riken S genomics/proteomics initiative, RSGI, structural genomics,; 2.00A {Aeropyrum pernix} SCOP: c.1.10.1
Probab=46.60 E-value=1.4e+02 Score=25.67 Aligned_cols=128 Identities=17% Similarity=0.176 Sum_probs=78.0
Q ss_pred CCchhHHHHHHHHHhCCCcEEEEeccCCCCCCCCcHHHHHHHHHHHHHhCCCcEEEEee--cCCCCCH----HHHHHHHH
Q 018731 131 PDPMEPENTAKAIASWGVDYIVLTSVDRDDIPDGGSGHFARTVKAMKKQKPDIMVECLT--SDFRGDL----RAVETLVH 204 (351)
Q Consensus 131 ~~~eei~~~~~~~~~~G~~~I~ltgg~~~~l~~~~~~~~~~li~~ik~~~p~i~i~~~~--~~~~~~~----e~l~~L~~ 204 (351)
.+.+++.+.++++.+.|+..|++. + .++ ...+.++.. +++++.+.+ |.+..+. ...+...+
T Consensus 33 ~t~~~i~~l~~~a~~~~~~aVcv~-------p----~~v-~a~~~l~~~-~~v~v~tvigFP~G~~~~~~k~~e~~~Av~ 99 (234)
T 1n7k_A 33 ATEEDVRNLVREASDYGFRCAVLT-------P----VYT-VKISGLAEK-LGVKLCSVIGFPLGQAPLEVKLVEAQTVLE 99 (234)
T ss_dssp CCHHHHHHHHHHHHHHTCSEEEEC-------H----HHH-HHHHHHHHH-HTCCEEEEESTTTCCSCHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHhCCCEEEEc-------h----HHh-eeehHhCCC-CCceEEEEeCCCCCCCcHHHHHHHHHHHHH
Confidence 456889999999999999999972 1 233 333444432 246666544 3222222 34566677
Q ss_pred cCCCeeecchh--chHHHHhhhcCCCCCHHHHHHHHHHHHHhCCCCeEEEeeeeeCCCCHHHHHHHHHHHHhCCCCEEee
Q 018731 205 SGLDVFAHNIE--TVKRLQRIVRDPRAGYEQSLEVLKHAKLSKKGLITKSSIMLGLGESDDDLKEAMADLRSIDVDILTL 282 (351)
Q Consensus 205 aG~~~i~~~ie--s~~~~~~~~r~~~~~~~~~l~~i~~~~~~~~Gi~v~~~~IvGlgEt~e~~~~~l~~l~~lg~d~i~i 282 (351)
.|.|.|.+-+. ...+ .-.+++....+.+.+ .|+.++.-+-.++ -|++++....+...++|+|+|-.
T Consensus 100 ~GAdEID~vinig~~~~---------~v~~ei~~v~~a~~~--~g~~lKvIlEt~~-L~~e~i~~a~ria~eaGADfVKT 167 (234)
T 1n7k_A 100 AGATELDVVPHLSLGPE---------AVYREVSGIVKLAKS--YGAVVKVILEAPL-WDDKTLSLLVDSSRRAGADIVKT 167 (234)
T ss_dssp HTCCEEEECCCGGGCHH---------HHHHHHHHHHHHHHH--TTCEEEEECCGGG-SCHHHHHHHHHHHHHTTCSEEES
T ss_pred cCCCEEEEeccchHHHH---------HHHHHHHHHHHHHhh--cCCeEEEEEeccC-CCHHHHHHHHHHHHHhCCCEEEe
Confidence 89999865332 2212 122233344444455 5776655444444 25788999999999999999877
Q ss_pred e
Q 018731 283 G 283 (351)
Q Consensus 283 ~ 283 (351)
+
T Consensus 168 s 168 (234)
T 1n7k_A 168 S 168 (234)
T ss_dssp C
T ss_pred C
Confidence 3
No 345
>3neh_A Renal dipeptidase family protein; structural genomics, nysgrc, dipeptide L-Leu-D-Ala, PSI-2, P structure initiative; HET: L3A; 1.64A {Listeria monocytogenes} PDB: 3lu2_A
Probab=46.44 E-value=1.7e+02 Score=26.48 Aligned_cols=161 Identities=12% Similarity=0.168 Sum_probs=88.4
Q ss_pred HHHHHHHhCCCcEEEEeccCCCCC-------CCCcHHHHH-HHHHHHHHhCCCcEEEEeecCCCCCHH-HHHHHHHcCCC
Q 018731 138 NTAKAIASWGVDYIVLTSVDRDDI-------PDGGSGHFA-RTVKAMKKQKPDIMVECLTSDFRGDLR-AVETLVHSGLD 208 (351)
Q Consensus 138 ~~~~~~~~~G~~~I~ltgg~~~~l-------~~~~~~~~~-~li~~ik~~~p~i~i~~~~~~~~~~~e-~l~~L~~aG~~ 208 (351)
..++.+.+.|++.+.+|=..+..+ .+.++..+. ++++++-+. ++-|.+.. .+++ ..+.+.-+..-
T Consensus 117 ~~L~~~y~lGvR~~~Lt~n~~N~~a~g~~~~~~~GLT~~G~~vV~eMnrl--GmivDlSH----~s~~t~~dvl~~s~~P 190 (318)
T 3neh_A 117 DKLTQLLDGGVLSVGLTWNNANLAADGIMEERGAGLTRFGKDIIHLLNER--KVFTDVSH----LSVKAFWETLEQAEFV 190 (318)
T ss_dssp HHHHHHHHTTEEEEESCSSSBCSSBBBTTCTTCCCBCHHHHHHHHHHHHH--TCEEECTT----BCHHHHHHHHHHCSSE
T ss_pred HHHHHHHHcCCeEEEeeecCCCccccCCCCCCCCCCChhhHHHHHHHHHc--CCeEEcCC----CCHHHHHHHHHhcCCC
Confidence 456677889999998873221111 134455554 678888776 77777633 2333 33333333222
Q ss_pred eeecchhchHHHHhhhcCCCCCHHHHHHHHHHHHHhCCCCeEEEeeeeeC-----CCCHHHHHHHHHHHHhC-CCCEEee
Q 018731 209 VFAHNIETVKRLQRIVRDPRAGYEQSLEVLKHAKLSKKGLITKSSIMLGL-----GESDDDLKEAMADLRSI-DVDILTL 282 (351)
Q Consensus 209 ~i~~~ies~~~~~~~~r~~~~~~~~~l~~i~~~~~~~~Gi~v~~~~IvGl-----gEt~e~~~~~l~~l~~l-g~d~i~i 282 (351)
.++|+- ...+.. .|+.-.++.+++|. + .|=-+..++.-.+ .-|.+++.++++.+.++ |+|+|.+
T Consensus 191 iaSHSn--aral~~---h~RNl~D~~l~ala---~--~GGvigv~~~~~fl~~~~~~tl~~~~~Hi~hi~~l~G~dhVgi 260 (318)
T 3neh_A 191 IASHSN--AKAICS---HPRNLDDEQIKAMI---E--HDAMIHVVFYPLFTTNNGVADTEDVIRHIDHICELGGLKNIGF 260 (318)
T ss_dssp EESSCC--BTTTSC---CTTSBCHHHHHHHH---H--TTCEEEECCCHHHHCTTSCCBHHHHHHHHHHHHHTTCGGGEEE
T ss_pred cccccc--hhhcCC---CCCCCCHHHHHHHH---H--cCCEEEEEeeHHhhCCCCCCCHHHHHHHHHHHHHhcCCCeEEE
Confidence 444431 111211 13344556666554 3 4444666666554 24689999999999884 7999999
Q ss_pred ecccCCCCCcccccCCCCHHHHHHHHHHHHhcCcc
Q 018731 283 GQYLQPTPLHLTVKEYVTPEKFDFWKAYGESIGFR 317 (351)
Q Consensus 283 ~~~l~PTp~~~~~~~~v~~~e~~~~~~~~~~~G~~ 317 (351)
+.=+--... .....-+..++-.+.+.+.+ ||.
T Consensus 261 GsDfDG~~~--~p~gl~d~s~~p~L~~~L~~-g~s 292 (318)
T 3neh_A 261 GSDFDGIPD--HVKGLEHVGKYQSFLETLEK-HYT 292 (318)
T ss_dssp CCCBTSCSS--CBBTBSSGGGHHHHHHHHTT-TSC
T ss_pred CCCCCCCCC--CCCCCCCHHHHHHHHHHHHh-cCC
Confidence 742200000 01122244567777666666 764
No 346
>2g0w_A LMO2234 protein; putative sugar isomerase, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE PG4; 1.70A {Listeria monocytogenes} SCOP: c.1.15.4
Probab=46.32 E-value=1.5e+02 Score=25.79 Aligned_cols=15 Identities=13% Similarity=0.153 Sum_probs=7.3
Q ss_pred HHHHHHHHcCCCeee
Q 018731 197 RAVETLVHSGLDVFA 211 (351)
Q Consensus 197 e~l~~L~~aG~~~i~ 211 (351)
+..+.+.++|+....
T Consensus 72 ~~~~~l~~~gl~i~~ 86 (296)
T 2g0w_A 72 DMLRILDEHNMKVTE 86 (296)
T ss_dssp HHHHHHHHTTCEEEE
T ss_pred HHHHHHHHcCCceEe
Confidence 344445555555443
No 347
>1viz_A PCRB protein homolog; structural genomics, unknown function; 1.85A {Bacillus subtilis} SCOP: c.1.4.1
Probab=46.26 E-value=1.4e+02 Score=25.69 Aligned_cols=70 Identities=11% Similarity=-0.076 Sum_probs=44.3
Q ss_pred chhHHHHHHHHHhCCCcEEEEeccCCCCCCCCcHHHHHHHHHHHHHhCCCcEEEEeecCCCCCHHHHHHHHHcCCCeeec
Q 018731 133 PMEPENTAKAIASWGVDYIVLTSVDRDDIPDGGSGHFARTVKAMKKQKPDIMVECLTSDFRGDLRAVETLVHSGLDVFAH 212 (351)
Q Consensus 133 ~eei~~~~~~~~~~G~~~I~ltgg~~~~l~~~~~~~~~~li~~ik~~~p~i~i~~~~~~~~~~~e~l~~L~~aG~~~i~~ 212 (351)
++.+.+.++.....+...|++.+ ... . ...++++.+++..+++.+.+ ..+..+++.++.+.+ |.|.+.+
T Consensus 141 ~~~~~~~a~~g~~~~~~~VYl~s-~G~--~-----~~~~~i~~i~~~~~~~Pv~v--GgGI~t~e~a~~~~~-gAd~VIV 209 (240)
T 1viz_A 141 MDDIVAYARVSELLQLPIFYLEY-SGV--L-----GDIEAVKKTKAVLETSTLFY--GGGIKDAETAKQYAE-HADVIVV 209 (240)
T ss_dssp HHHHHHHHHHHHHTTCSEEEEEC-TTS--C-----CCHHHHHHHHHTCSSSEEEE--ESSCCSHHHHHHHHT-TCSEEEE
T ss_pred HHHHHHHHHhCcccCCCEEEEeC-CCc--c-----ChHHHHHHHHHhcCCCCEEE--EeccCCHHHHHHHHh-CCCEEEE
Confidence 34333333332235567888876 321 1 13567778887643556543 456678999999999 9999987
Q ss_pred c
Q 018731 213 N 213 (351)
Q Consensus 213 ~ 213 (351)
|
T Consensus 210 G 210 (240)
T 1viz_A 210 G 210 (240)
T ss_dssp C
T ss_pred C
Confidence 6
No 348
>4aie_A Glucan 1,6-alpha-glucosidase; hydrolase, glycoside hydrolase 13; HET: MES GOL; 2.05A {Lactobacillus acidophilus ncfm}
Probab=46.21 E-value=43 Score=32.22 Aligned_cols=84 Identities=8% Similarity=0.060 Sum_probs=0.0
Q ss_pred HHHHHHHHcCCCeeecch--------hchHHH-HhhhcCCCCCHHHHHHHHHHHHHhCCCCeEEEeeeeeC-CCC-----
Q 018731 197 RAVETLVHSGLDVFAHNI--------ETVKRL-QRIVRDPRAGYEQSLEVLKHAKLSKKGLITKSSIMLGL-GES----- 261 (351)
Q Consensus 197 e~l~~L~~aG~~~i~~~i--------es~~~~-~~~~r~~~~~~~~~l~~i~~~~~~~~Gi~v~~~~IvGl-gEt----- 261 (351)
+.|+.|++.|++.|.+.. -..+.. +..+...=.+.++..+.++.+++ .||+|-.++++.+ +..
T Consensus 36 ~kLdYLk~LGvt~I~L~Pi~~~~~~~~GYd~~dy~~vdp~~Gt~~dfk~Lv~~aH~--~Gi~VilD~V~NHts~~~~wf~ 113 (549)
T 4aie_A 36 SRLDYLEKLGIDAIWLSPVYQSPGVDNGYDISDYEAIDPQYGTMADMDELISKAKE--HHIKIVMDLVVNHTSDQHKWFV 113 (549)
T ss_dssp TTHHHHHHHTCSEEEECCCEECCCTTTTSSCSEEEEECTTTCCHHHHHHHHHHHHH--TTCEEEEEECCSBCCTTSHHHH
T ss_pred HhhHHHHHCCCCEEEeCCCcCCCCCCCCcCccCCCCcCcccCCHHHHHHHHHHHHH--CCCEEEEEECccCCcCCcchhh
Q ss_pred -----------------------------------------------------------------HHHHHHHHHHHHhCC
Q 018731 262 -----------------------------------------------------------------DDDLKEAMADLRSID 276 (351)
Q Consensus 262 -----------------------------------------------------------------~e~~~~~l~~l~~lg 276 (351)
.+.+.+.+.+..+.|
T Consensus 114 ~~~~~~~~~~~~~y~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~dln~~np~v~~~i~~~~~~W~e~g 193 (549)
T 4aie_A 114 EAKKGKDNQYRDYYIWRDPVDEHEPNDLKSAFSGSAWKYDERSGQYYLHFFADQQPDLNWQNTELRQKIYNMMNFWLDKG 193 (549)
T ss_dssp HHTTCTTSTTGGGBCEECCBTTBCSSCCBCTTSSBSEEEETTTTEEEECSSCTTSCBBCTTCHHHHHHHHHHHHHHHHTT
T ss_pred hhhhcccccccccccccCCcccCCCCCcccccCCCcccccccCCceEecccCCCCCccccCCHHHHHHHHHHHHHHHHhc
Q ss_pred CCEEee
Q 018731 277 VDILTL 282 (351)
Q Consensus 277 ~d~i~i 282 (351)
+|-+.+
T Consensus 194 vDGfRl 199 (549)
T 4aie_A 194 IGGFRM 199 (549)
T ss_dssp CCEEEE
T ss_pred CCceeE
No 349
>3th6_A Triosephosphate isomerase; alpha/beta barrel, embryogenesis, glycolysis; 2.40A {Rhipicephalus microplus}
Probab=46.15 E-value=63 Score=28.23 Aligned_cols=56 Identities=21% Similarity=0.127 Sum_probs=39.0
Q ss_pred HHHHHHHcCCCeeecchhchHHHHhhhcCCCCCHHHHHHHHHHHHHhCCCCeEEEeeeeeCCCCHHHH
Q 018731 198 AVETLVHSGLDVFAHNIETVKRLQRIVRDPRAGYEQSLEVLKHAKLSKKGLITKSSIMLGLGESDDDL 265 (351)
Q Consensus 198 ~l~~L~~aG~~~i~~~ies~~~~~~~~r~~~~~~~~~l~~i~~~~~~~~Gi~v~~~~IvGlgEt~e~~ 265 (351)
-...|+++|++.+-+|- ..+|.+- +.+-+.+-+.++.+.+ .|+. .|+-.|||.++.
T Consensus 79 S~~mL~d~G~~~ViiGH----SERR~~f--~Etd~~v~~Kv~~Al~--~GL~----pI~CvGEtleer 134 (249)
T 3th6_A 79 SPGMIKDCGGQWVILGH----SERRHVF--KEDDVLIGEKIKHALE--SGLN----VIACIGELLEDR 134 (249)
T ss_dssp CHHHHHHTTCCEEEESC----HHHHHTS--CCCHHHHHHHHHHHHH--TTCE----EEEEECCCHHHH
T ss_pred CHHHHHHcCCCEEEECc----hhhcccc--CCCHHHHHHHHHHHHH--CCCE----EEEEcCCcHHHH
Confidence 35678899999998762 2233332 4566677777888888 8986 356568998765
No 350
>1y0e_A Putative N-acetylmannosamine-6-phosphate 2-epimer; mannac-6-P epimerase, NANE, structural genomics, protein STR initiative, PSI; 1.95A {Staphylococcus aureus subsp} SCOP: c.1.2.5
Probab=46.02 E-value=1.3e+02 Score=25.01 Aligned_cols=71 Identities=17% Similarity=0.039 Sum_probs=42.8
Q ss_pred HHHHHhCCCcEEEEeccCCCCC-CCCc-HHHHHHHHHHHHHhCCCcEEEEeecCCCCCHHHHHHHHHcCCCeeecc
Q 018731 140 AKAIASWGVDYIVLTSVDRDDI-PDGG-SGHFARTVKAMKKQKPDIMVECLTSDFRGDLRAVETLVHSGLDVFAHN 213 (351)
Q Consensus 140 ~~~~~~~G~~~I~ltgg~~~~l-~~~~-~~~~~~li~~ik~~~p~i~i~~~~~~~~~~~e~l~~L~~aG~~~i~~~ 213 (351)
+..+.+.|+..|.++....+.- .+.. ...-.+.++.+++.. ++.+-+ .++..+.+.+..+.++|.+.+.++
T Consensus 132 ~~~~~~~G~d~i~~~~~g~t~~~~~~~~~~~~~~~~~~~~~~~-~ipvia--~GGI~~~~~~~~~~~~Gad~v~vG 204 (223)
T 1y0e_A 132 AKNAARLGFDYIGTTLHGYTSYTQGQLLYQNDFQFLKDVLQSV-DAKVIA--EGNVITPDMYKRVMDLGVHCSVVG 204 (223)
T ss_dssp HHHHHHTTCSEEECTTTTSSTTSTTCCTTHHHHHHHHHHHHHC-CSEEEE--ESSCCSHHHHHHHHHTTCSEEEEC
T ss_pred HHHHHHcCCCEEEeCCCcCcCCCCCCCCCcccHHHHHHHHhhC-CCCEEE--ecCCCCHHHHHHHHHcCCCEEEEC
Confidence 3446678998876532111000 1110 122346777777754 455543 456558999999999999999876
No 351
>2gou_A Oxidoreductase, FMN-binding; OLD yeallow enzyme, flavoenzyme; HET: BOG FMN PE4; 1.40A {Shewanella oneidensis} PDB: 2gq8_A* 2gq9_A* 2gqa_A*
Probab=45.93 E-value=84 Score=28.94 Aligned_cols=73 Identities=16% Similarity=0.251 Sum_probs=48.4
Q ss_pred chhHHHHHHHHHhCCCcEEEEeccCCCCCCCCcHHHHHHHHHHHHHhCCCcEEEEeecCCCCCHHHHHHHHHcC-CCeee
Q 018731 133 PMEPENTAKAIASWGVDYIVLTSVDRDDIPDGGSGHFARTVKAMKKQKPDIMVECLTSDFRGDLRAVETLVHSG-LDVFA 211 (351)
Q Consensus 133 ~eei~~~~~~~~~~G~~~I~ltgg~~~~l~~~~~~~~~~li~~ik~~~p~i~i~~~~~~~~~~~e~l~~L~~aG-~~~i~ 211 (351)
.++..+.++.+.+.|+..|.++++....-+... .++++.+++.. ++.|- ..++. +.+.++.+.+.| +|.|.
T Consensus 249 ~~~~~~~a~~l~~~G~d~i~v~~~~~~~~~~~~----~~~~~~i~~~~-~iPvi--~~Ggi-~~~~a~~~l~~g~aD~V~ 320 (365)
T 2gou_A 249 ILTYTAAAALLNKHRIVYLHIAEVDWDDAPDTP----VSFKRALREAY-QGVLI--YAGRY-NAEKAEQAINDGLADMIG 320 (365)
T ss_dssp HHHHHHHHHHHHHTTCSEEEEECCBTTBCCCCC----HHHHHHHHHHC-CSEEE--EESSC-CHHHHHHHHHTTSCSEEE
T ss_pred HHHHHHHHHHHHHcCCCEEEEeCCCcCCCCCcc----HHHHHHHHHHC-CCcEE--EeCCC-CHHHHHHHHHCCCcceeh
Confidence 456777888888999999998875311001111 25667777765 44543 34444 888888888887 99998
Q ss_pred cc
Q 018731 212 HN 213 (351)
Q Consensus 212 ~~ 213 (351)
++
T Consensus 321 ig 322 (365)
T 2gou_A 321 FG 322 (365)
T ss_dssp CC
T ss_pred hc
Confidence 76
No 352
>3sr7_A Isopentenyl-diphosphate delta-isomerase; isopentenyl pyrophosphate isomerase, TIM-barrel; 2.04A {Streptococcus mutans}
Probab=45.82 E-value=66 Score=29.81 Aligned_cols=79 Identities=9% Similarity=0.068 Sum_probs=52.9
Q ss_pred HHHHHHHHHcCCCeeecchhchHHHHhhhcCC-CCCHHHHHHHHHHHHHhCCCCeEEEeeeeeCCCCHHHHHHHHHHHHh
Q 018731 196 LRAVETLVHSGLDVFAHNIETVKRLQRIVRDP-RAGYEQSLEVLKHAKLSKKGLITKSSIMLGLGESDDDLKEAMADLRS 274 (351)
Q Consensus 196 ~e~l~~L~~aG~~~i~~~ies~~~~~~~~r~~-~~~~~~~l~~i~~~~~~~~Gi~v~~~~IvGlgEt~e~~~~~l~~l~~ 274 (351)
++..+....+|.|.+.+++....+. +... ..++..+++.++.+++. .++.|..-. +|+|-+.++ ++.+.+
T Consensus 158 e~~~~~ve~~~adal~ihln~~qe~---~~p~Gd~~~~~~~~~I~~l~~~-~~~PVivK~-vg~g~s~e~----A~~l~~ 228 (365)
T 3sr7_A 158 QAGLQAVRDLQPLFLQVHINLMQEL---LMPEGEREFRSWKKHLSDYAKK-LQLPFILKE-VGFGMDVKT----IQTAID 228 (365)
T ss_dssp HHHHHHHHHHCCSCEEEEECHHHHH---TSSSSCCCCHHHHHHHHHHHHH-CCSCEEEEE-CSSCCCHHH----HHHHHH
T ss_pred HHHHHHHHhcCCCEEEEeccccccc---cCCCCCCcHHHHHHHHHHHHHh-hCCCEEEEE-CCCCCCHHH----HHHHHH
Confidence 3456666688999998887666543 2111 23567788888888763 366655553 577777765 455678
Q ss_pred CCCCEEeee
Q 018731 275 IDVDILTLG 283 (351)
Q Consensus 275 lg~d~i~i~ 283 (351)
.|+|.+.+.
T Consensus 229 aGad~I~V~ 237 (365)
T 3sr7_A 229 LGVKTVDIS 237 (365)
T ss_dssp HTCCEEECC
T ss_pred cCCCEEEEe
Confidence 899998884
No 353
>4dwd_A Mandelate racemase/muconate lactonizing enzyme, C domain protein; structural genomics, EFI, enzyme function initiative, metal protein; HET: MSE; 1.50A {Paracoccus denitrificans} PDB: 3n4e_A*
Probab=45.80 E-value=1.9e+02 Score=26.82 Aligned_cols=153 Identities=11% Similarity=0.034 Sum_probs=82.8
Q ss_pred CchhHHHHH-HHHHhCCCcEEEEeccCCCCCCCCcHHHHHHHHHHHHHhC-CCcEEEEeecCCCCCH----HHHHHHHHc
Q 018731 132 DPMEPENTA-KAIASWGVDYIVLTSVDRDDIPDGGSGHFARTVKAMKKQK-PDIMVECLTSDFRGDL----RAVETLVHS 205 (351)
Q Consensus 132 ~~eei~~~~-~~~~~~G~~~I~ltgg~~~~l~~~~~~~~~~li~~ik~~~-p~i~i~~~~~~~~~~~----e~l~~L~~a 205 (351)
+++++.+.+ +.+.+.|++.+-+--|.+......+.+.-.+.++++++.. +++.+.+=.+.. .+. +.++.|.+.
T Consensus 139 ~~e~~~~~a~~~~~~~G~~~~KlKvG~~~~~~~~~~~~d~~~v~avR~a~g~~~~l~vDaN~~-~~~~~A~~~~~~L~~~ 217 (393)
T 4dwd_A 139 SVDEVVREVARRVEAEQPAAVKIRWDGDRTRCDVDIPGDIAKARAVRELLGPDAVIGFDANNG-YSVGGAIRVGRALEDL 217 (393)
T ss_dssp CHHHHHHHHHHHHHHHCCSEEEEECCCCTTCCSCCHHHHHHHHHHHHHHHCTTCCEEEECTTC-CCHHHHHHHHHHHHHT
T ss_pred CHHHHHHHHHHHHHHcCCCEEEEccCCCCcccccCHHHHHHHHHHHHHHhCCCCeEEEECCCC-CCHHHHHHHHHHHHhh
Confidence 478888888 8888889999877433211011112466778888998864 555443322333 243 346677788
Q ss_pred CCCeeecchhchHHHHhhhcCCCCCHHHHHHHHHHHHHhCCCCeEEEeeeeeCCCCHHHHHHHHHHHHhCCCCEEeeecc
Q 018731 206 GLDVFAHNIETVKRLQRIVRDPRAGYEQSLEVLKHAKLSKKGLITKSSIMLGLGESDDDLKEAMADLRSIDVDILTLGQY 285 (351)
Q Consensus 206 G~~~i~~~ies~~~~~~~~r~~~~~~~~~l~~i~~~~~~~~Gi~v~~~~IvGlgEt~e~~~~~l~~l~~lg~d~i~i~~~ 285 (351)
|+..|- - ++ +..++ +.++.+++. .++.+. .+|+..+..+..+.+..- +|.+.+-
T Consensus 218 ~i~~iE----q--P~------~~~d~----~~~~~l~~~-~~iPIa------~dE~~~~~~~~~~~i~~~-~d~v~~k-- 271 (393)
T 4dwd_A 218 GYSWFE----E--PV------QHYHV----GAMGEVAQR-LDITVS------AGEQTYTLQALKDLILSG-VRMVQPD-- 271 (393)
T ss_dssp TCSEEE----C--CS------CTTCH----HHHHHHHHH-CSSEEE------BCTTCCSHHHHHHHHHHT-CCEECCC--
T ss_pred CCCEEE----C--CC------CcccH----HHHHHHHhh-CCCCEE------ecCCcCCHHHHHHHHHcC-CCEEEeC--
Confidence 887762 1 11 11233 333344431 344432 345444443444444444 8776662
Q ss_pred cCCCCCcccccCCCCHHHHHHHHHHHHhcCcceec
Q 018731 286 LQPTPLHLTVKEYVTPEKFDFWKAYGESIGFRYVA 320 (351)
Q Consensus 286 l~PTp~~~~~~~~v~~~e~~~~~~~~~~~G~~~~~ 320 (351)
++... ...+..++.++++..|...+.
T Consensus 272 --~~~~G-------Git~~~~ia~~A~~~gi~~~~ 297 (393)
T 4dwd_A 272 --IVKMG-------GITGMMQCAALAHAHGVEFVP 297 (393)
T ss_dssp --TTTTT-------HHHHHHHHHHHHHHHTCEECC
T ss_pred --ccccC-------CHHHHHHHHHHHHHcCCEEee
Confidence 22211 134567777788888776543
No 354
>1m3u_A 3-methyl-2-oxobutanoate hydroxymethyltransferase; beta-alpha-barrel, TIM-barrel, ketopantoate, selenomethionin decamer; HET: KPL; 1.80A {Escherichia coli} SCOP: c.1.12.8
Probab=45.75 E-value=1.6e+02 Score=25.94 Aligned_cols=124 Identities=18% Similarity=0.245 Sum_probs=0.0
Q ss_pred HHHHHhCCCcEEEEec-------cCCCCCCCCcHHHHHHHHHHHHHhCCCcEEEEeec--CCCCCHHHHH---HHHHcCC
Q 018731 140 AKAIASWGVDYIVLTS-------VDRDDIPDGGSGHFARTVKAMKKQKPDIMVECLTS--DFRGDLRAVE---TLVHSGL 207 (351)
Q Consensus 140 ~~~~~~~G~~~I~ltg-------g~~~~l~~~~~~~~~~li~~ik~~~p~i~i~~~~~--~~~~~~e~l~---~L~~aG~ 207 (351)
++.+.+.|++-+.+++ |.++.++ -.++.+..-.+.+.+-.+...+-+=.| ++...++.++ ++.++|+
T Consensus 30 A~l~e~aG~d~ilvGdsl~~~~lG~~dt~~-vtldemi~h~~aV~r~~~~~~vvaD~pfgsy~~~~~a~~~a~rl~kaGa 108 (264)
T 1m3u_A 30 AKLFADEGLNVMLVGDSLGMTVQGHDSTLP-VTVADIAYHTAAVRRGAPNCLLLADLPFMAYATPEQAFENAATVMRAGA 108 (264)
T ss_dssp HHHHHHHTCCEEEECTTHHHHTTCCSSSTT-CCHHHHHHHHHHHHHHCTTSEEEEECCTTSSSSHHHHHHHHHHHHHTTC
T ss_pred HHHHHHcCCCEEEECHHHHHHHcCCCCCCC-cCHHHHHHHHHHHHhhCCCCcEEEECCCCCcCCHHHHHHHHHHHHHcCC
Q ss_pred CeeecchhchHHHHhhhcCCCCCHHHHHHHHHHHHHhCCCCeEE--------------EeeeeeC-CCCHHHHHHHHHHH
Q 018731 208 DVFAHNIETVKRLQRIVRDPRAGYEQSLEVLKHAKLSKKGLITK--------------SSIMLGL-GESDDDLKEAMADL 272 (351)
Q Consensus 208 ~~i~~~ies~~~~~~~~r~~~~~~~~~l~~i~~~~~~~~Gi~v~--------------~~~IvGl-gEt~e~~~~~l~~l 272 (351)
+.| +-.+-++..+.|+.+.+ .|+.|. ...+.|- .+..+++.+-.+.+
T Consensus 109 ~aV----------------klEgg~e~~~~I~al~~--agipV~gHiGLtPq~v~~~ggf~v~grt~~~a~~~i~rA~a~ 170 (264)
T 1m3u_A 109 NMV----------------KIEGGEWLVETVQMLTE--RAVPVCGHLGLTPQSVNIFGGYKVQGRGDEAGDQLLSDALAL 170 (264)
T ss_dssp SEE----------------ECCCSGGGHHHHHHHHH--TTCCEEEEEESCGGGHHHHTSSCCCCCSHHHHHHHHHHHHHH
T ss_pred CEE----------------EECCcHHHHHHHHHHHH--CCCCeEeeecCCceeecccCCeEEEeCCHHHHHHHHHHHHHH
Q ss_pred HhCCCCEEee
Q 018731 273 RSIDVDILTL 282 (351)
Q Consensus 273 ~~lg~d~i~i 282 (351)
.+.|.+.+.+
T Consensus 171 ~eAGA~~ivl 180 (264)
T 1m3u_A 171 EAAGAQLLVL 180 (264)
T ss_dssp HHHTCCEEEE
T ss_pred HHCCCcEEEE
No 355
>3hbl_A Pyruvate carboxylase; TIM barrel, ligase; HET: BTI ADP; 2.71A {Staphylococcus aureus subsp} PDB: 3bg5_A* 3ho8_A* 4hnu_A* 4hnt_A* 4hnv_A* 3hb9_A*
Probab=45.33 E-value=1.2e+02 Score=32.64 Aligned_cols=78 Identities=10% Similarity=0.066 Sum_probs=51.4
Q ss_pred CCchhHHHHHHHHHhCCCcEEEEeccCCCCCCCCcHHHHHHHHHHHHHhCCCcEEEEe-ecCCCCCHHHHHHHHHcCCCe
Q 018731 131 PDPMEPENTAKAIASWGVDYIVLTSVDRDDIPDGGSGHFARTVKAMKKQKPDIMVECL-TSDFRGDLRAVETLVHSGLDV 209 (351)
Q Consensus 131 ~~~eei~~~~~~~~~~G~~~I~ltgg~~~~l~~~~~~~~~~li~~ik~~~p~i~i~~~-~~~~~~~~e~l~~L~~aG~~~ 209 (351)
.+++...+.++.+.+.|+..|.|-.-..-.. ...+.++++.+++.. ++.|.+- +++.-+--...-.-.++|++.
T Consensus 689 ~~~~~~~~~a~~~~~~Ga~~i~l~Dt~G~~~----P~~~~~lv~~l~~~~-~~~i~~H~Hnt~G~a~An~laA~~aGa~~ 763 (1150)
T 3hbl_A 689 YTLEYYVKLAKELEREGFHILAIKDMAGLLK----PKAAYELIGELKSAV-DLPIHLHTHDTSGNGLLTYKQAIDAGVDI 763 (1150)
T ss_dssp SSHHHHHHHHHHHHHTTCSEEEEEETTCCCC----HHHHHHHHHHHHHHC-CSCEEEEECBTTSCHHHHHHHHHHTTCSE
T ss_pred CCHHHHHHHHHHHHHcCCCeeeEcCccCCCC----HHHHHHHHHHHHHhc-CCeEEEEeCCCCcHHHHHHHHHHHhCCCE
Confidence 3456788999999999999999844332212 378899999999874 5544432 233222334444556799999
Q ss_pred eecc
Q 018731 210 FAHN 213 (351)
Q Consensus 210 i~~~ 213 (351)
|-..
T Consensus 764 vD~a 767 (1150)
T 3hbl_A 764 IDTA 767 (1150)
T ss_dssp EEEB
T ss_pred EEEe
Confidence 8643
No 356
>3fa4_A 2,3-dimethylmalate lyase; alpha/beta barrel, helix swapping; 2.18A {Aspergillus niger} PDB: 3fa3_A
Probab=45.15 E-value=1.7e+02 Score=26.22 Aligned_cols=115 Identities=11% Similarity=0.006 Sum_probs=73.4
Q ss_pred CHHHHHHHHHcCCCeeecchhchHHHHhhhcCC-CCCHHHHHHHHHHHHHhCCCCeEEEeeeeeCCCCHHHHHHHHHHHH
Q 018731 195 DLRAVETLVHSGLDVFAHNIETVKRLQRIVRDP-RAGYEQSLEVLKHAKLSKKGLITKSSIMLGLGESDDDLKEAMADLR 273 (351)
Q Consensus 195 ~~e~l~~L~~aG~~~i~~~ies~~~~~~~~r~~-~~~~~~~l~~i~~~~~~~~Gi~v~~~~IvGlgEt~e~~~~~l~~l~ 273 (351)
|.-....+.++|++.+.++=.+.........+. ..++++.+..++.+.+....+.+.+|+-.|+|. .+++.++++.+.
T Consensus 27 D~~sA~l~e~aGf~ai~vsG~~~a~~~~G~pD~~~vt~~em~~~~~~I~~~~~~~PviaD~d~Gyg~-~~~v~~tv~~l~ 105 (302)
T 3fa4_A 27 DGLSARVALSAGFDALYMTGAGTAASVHGQADLGICTLNDMRANAEMISNISPSTPVIADADTGYGG-PIMVARTTEQYS 105 (302)
T ss_dssp SHHHHHHHHTTTCSCEEECHHHHHHHHHSCCSSSCCCHHHHHHHHHHHHTTSTTSCEEEECTTTTSS-HHHHHHHHHHHH
T ss_pred CHHHHHHHHHcCCCEEEeCcHHHHHHHcCCCCCCcCCHHHHHHHHHHHHhhccCCCEEEECCCCCCC-HHHHHHHHHHHH
Confidence 667788888999999987433322211111111 358999999888887632377899999999984 778999999999
Q ss_pred hCCCCEEeeecccCC-CCCcccccCCCCHHHH-HHHHHH
Q 018731 274 SIDVDILTLGQYLQP-TPLHLTVKEYVTPEKF-DFWKAY 310 (351)
Q Consensus 274 ~lg~d~i~i~~~l~P-Tp~~~~~~~~v~~~e~-~~~~~~ 310 (351)
+.|+.-+.+=--..| .-.+......++.+++ .+++..
T Consensus 106 ~aGaagv~iEDq~~~Krcgh~~gk~l~~~~e~~~rI~Aa 144 (302)
T 3fa4_A 106 RSGVAAFHIEDQVQTKRCGHLAGKILVDTDTYVTRIRAA 144 (302)
T ss_dssp HTTCCEEEECSBCCC-------CCCBCCHHHHHHHHHHH
T ss_pred HcCCcEEEECCCCCCcccCCCCCCeecCHHHHHHHHHHH
Confidence 999998887222223 1112222345666655 445543
No 357
>3i65_A Dihydroorotate dehydrogenase homolog, mitochondrial; triazolopyrimidine,inhibitor, DSM1, FAD, flavoprotein, membrane, mitochondrion; HET: JZ8 FMN ORO LDA; 2.00A {Plasmodium falciparum 3D7} PDB: 3i68_A* 3i6r_A* 3o8a_A* 3sfk_A*
Probab=44.76 E-value=65 Score=30.47 Aligned_cols=79 Identities=14% Similarity=0.119 Sum_probs=52.1
Q ss_pred chhHHHHHHHHHhCCCcEEEEeccCCC--CCC-----CCc------HHHHHHHHHHHHHhCC-CcEEEEeecCCCCCHHH
Q 018731 133 PMEPENTAKAIASWGVDYIVLTSVDRD--DIP-----DGG------SGHFARTVKAMKKQKP-DIMVECLTSDFRGDLRA 198 (351)
Q Consensus 133 ~eei~~~~~~~~~~G~~~I~ltgg~~~--~l~-----~~~------~~~~~~li~~ik~~~p-~i~i~~~~~~~~~~~e~ 198 (351)
.+++.+.++.+.+.|++.|+++..... ++. .++ ...-.+++..+++... ++.|- ..+++.+.+.
T Consensus 282 ~~~i~~iA~~a~~aGaDgIiv~Ntt~~r~dl~~~~~~~GGlSG~a~~p~al~~I~~v~~~v~~~iPII--g~GGI~s~eD 359 (415)
T 3i65_A 282 QEQKKEIADVLLETNIDGMIISNTTTQINDIKSFENKKGGVSGAKLKDISTKFICEMYNYTNKQIPII--ASGGIFSGLD 359 (415)
T ss_dssp HHHHHHHHHHHHHHTCSEEEECCCBSCCCCCGGGTTCCSEEEEGGGHHHHHHHHHHHHHHTTTCSCEE--ECSSCCSHHH
T ss_pred HHHHHHHHHHHHHcCCcEEEEeCCCcccccccccccccCCcCCccchHHHHHHHHHHHHHhCCCCCEE--EECCCCCHHH
Confidence 347888899999999999998653321 110 011 2345678888887653 35543 3556667777
Q ss_pred HHHHHHcCCCeeecc
Q 018731 199 VETLVHSGLDVFAHN 213 (351)
Q Consensus 199 l~~L~~aG~~~i~~~ 213 (351)
+..+..+|.+.|.++
T Consensus 360 a~e~l~aGAd~VqIg 374 (415)
T 3i65_A 360 ALEKIEAGASVCQLY 374 (415)
T ss_dssp HHHHHHHTEEEEEES
T ss_pred HHHHHHcCCCEEEEc
Confidence 777777999999875
No 358
>1ep3_A Dihydroorotate dehydrogenase B (PYRD subunit); heterotetramer, alpha-beta barrel, beta sandwich, FAD domain alpha/beta NADP domain; HET: FMN FAD; 2.10A {Lactococcus lactis} SCOP: c.1.4.1 PDB: 1ep2_A* 1ep1_A*
Probab=44.51 E-value=26 Score=31.28 Aligned_cols=81 Identities=11% Similarity=0.030 Sum_probs=45.0
Q ss_pred HHHHHHHH-cCCCeeecchhchHHHHhhhcCCCCCHHHHHHHHHHHHHhCCCCeEEEeeeeeCCCCHHHHHHHHHHHHhC
Q 018731 197 RAVETLVH-SGLDVFAHNIETVKRLQRIVRDPRAGYEQSLEVLKHAKLSKKGLITKSSIMLGLGESDDDLKEAMADLRSI 275 (351)
Q Consensus 197 e~l~~L~~-aG~~~i~~~ies~~~~~~~~r~~~~~~~~~l~~i~~~~~~~~Gi~v~~~~IvGlgEt~e~~~~~l~~l~~l 275 (351)
+.++.+.+ +|+|.|.+++-+.....+... -..+.+...+.++.+++. .++.+..-+..++ .+..+.++.+.+.
T Consensus 115 ~~a~~~~~~~g~d~iei~~~~p~~~~g~~~-~g~~~~~~~eii~~v~~~-~~~pv~vk~~~~~----~~~~~~a~~l~~~ 188 (311)
T 1ep3_A 115 AVCAKIGDAANVKAIELNISCPNVKHGGQA-FGTDPEVAAALVKACKAV-SKVPLYVKLSPNV----TDIVPIAKAVEAA 188 (311)
T ss_dssp HHHHHHTTSTTEEEEEEECCSEEGGGTTEE-GGGCHHHHHHHHHHHHHH-CSSCEEEEECSCS----SCSHHHHHHHHHT
T ss_pred HHHHHHhccCCCCEEEEeCCCCCCCCchhh-hcCCHHHHHHHHHHHHHh-cCCCEEEEECCCh----HHHHHHHHHHHHc
Confidence 44555556 889988766533211000000 022566667777777762 1665433333333 2345567778899
Q ss_pred CCCEEeee
Q 018731 276 DVDILTLG 283 (351)
Q Consensus 276 g~d~i~i~ 283 (351)
|+|.+.+.
T Consensus 189 G~d~i~v~ 196 (311)
T 1ep3_A 189 GADGLTMI 196 (311)
T ss_dssp TCSEEEEC
T ss_pred CCCEEEEe
Confidence 99998883
No 359
>1k77_A EC1530, hypothetical protein YGBM; TIM barrel, structural genomics, PSI, structure initiative; 1.63A {Escherichia coli} SCOP: c.1.15.5
Probab=44.47 E-value=69 Score=27.11 Aligned_cols=42 Identities=21% Similarity=0.130 Sum_probs=20.2
Q ss_pred HHHHHHHHHhCCCcEEEEeecCCCCCHHHHHHHHHcCCCeeec
Q 018731 170 ARTVKAMKKQKPDIMVECLTSDFRGDLRAVETLVHSGLDVFAH 212 (351)
Q Consensus 170 ~~li~~ik~~~p~i~i~~~~~~~~~~~e~l~~L~~aG~~~i~~ 212 (351)
.+.++.+++..-+ .|++..+......+..+.+.++|+....+
T Consensus 18 ~~~l~~~~~~G~~-~vEl~~~~~~~~~~~~~~l~~~gl~~~~~ 59 (260)
T 1k77_A 18 IERFAAARKAGFD-AVEFLFPYNYSTLQIQKQLEQNHLTLALF 59 (260)
T ss_dssp GGHHHHHHHHTCS-EEECSCCTTSCHHHHHHHHHHTTCEEEEE
T ss_pred HHHHHHHHHhCCC-EEEecCCCCCCHHHHHHHHHHcCCceEEE
Confidence 3445555554211 45543332221234556677777766544
No 360
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=44.46 E-value=48 Score=33.17 Aligned_cols=87 Identities=14% Similarity=0.165 Sum_probs=48.3
Q ss_pred HHHHHHHHcCCCeeecchhc---hHHHH-hhhc---C-CCCCHHH----HHHHHHHHHHhC-CCCeE----EEeeeeeCC
Q 018731 197 RAVETLVHSGLDVFAHNIET---VKRLQ-RIVR---D-PRAGYEQ----SLEVLKHAKLSK-KGLIT----KSSIMLGLG 259 (351)
Q Consensus 197 e~l~~L~~aG~~~i~~~ies---~~~~~-~~~r---~-~~~~~~~----~l~~i~~~~~~~-~Gi~v----~~~~IvGlg 259 (351)
+.++..+++|+|.|-++.-. ++.+. ...+ | -+.+.+. .++.++.+++.. +++.+ +..-...-|
T Consensus 145 ~aA~~a~~aGfd~veih~~~gyl~~qFlsp~~n~r~d~yGgs~~~r~r~~~eiv~avr~~vG~~~~v~vrls~~~~~~~g 224 (671)
T 1ps9_A 145 RCAQLAREAGYDGVEVMGSEGYLINEFLTLRTNQRSDQWGGDYRNRMRFAVEVVRAVRERVGNDFIIIYRLSMLDLVEDG 224 (671)
T ss_dssp HHHHHHHHTTCSEEEEEECBTSHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHHCSSSEEEEEEEEECCSTTC
T ss_pred HHHHHHHHcCCCEEEEccccchHHHHhCCCccCCCcCcCCCcHHHHHHHHHHHHHHHHHHcCCCceEEEEECccccCCCC
Confidence 45667788999998764311 12211 1100 0 1224433 344555554421 34433 221111127
Q ss_pred CCHHHHHHHHHHHHhCCCCEEeee
Q 018731 260 ESDDDLKEAMADLRSIDVDILTLG 283 (351)
Q Consensus 260 Et~e~~~~~l~~l~~lg~d~i~i~ 283 (351)
.+.++..+.++.+.+.|+|.++++
T Consensus 225 ~~~~~~~~~a~~l~~~g~d~i~v~ 248 (671)
T 1ps9_A 225 GTFAETVELAQAIEAAGATIINTG 248 (671)
T ss_dssp CCHHHHHHHHHHHHHHTCSEEEEE
T ss_pred CCHHHHHHHHHHHHhcCCCEEEcC
Confidence 789999999999999999999874
No 361
>3sjn_A Mandelate racemase/muconate lactonizing protein; enolase, magnesium binding site, lyase; 1.90A {Shewanella pealeana}
Probab=44.35 E-value=1.9e+02 Score=26.48 Aligned_cols=150 Identities=12% Similarity=0.030 Sum_probs=85.1
Q ss_pred CchhHHHHHHHHHhCCCcEEEEeccCCCCCCCCcHHHHHHHHHHHHHh-CCCcEEEEeecCCCCC-H----HHHHHHHHc
Q 018731 132 DPMEPENTAKAIASWGVDYIVLTSVDRDDIPDGGSGHFARTVKAMKKQ-KPDIMVECLTSDFRGD-L----RAVETLVHS 205 (351)
Q Consensus 132 ~~eei~~~~~~~~~~G~~~I~ltgg~~~~l~~~~~~~~~~li~~ik~~-~p~i~i~~~~~~~~~~-~----e~l~~L~~a 205 (351)
+++++.+.++.+.+.|++.+-+-.|... ...+.-.+.++++++. .+++.+.+=.+... + . +.++.|.+.
T Consensus 146 ~~e~~~~~a~~~~~~Gf~~iKlk~g~~g----~~~~~d~~~v~avR~a~g~~~~l~vDan~~~-~d~~~A~~~~~~l~~~ 220 (374)
T 3sjn_A 146 KPEDNVAIVQGLKDQGFSSIKFGGGVMG----DDPDTDYAIVKAVREAAGPEMEVQIDLASKW-HTCGHSAMMAKRLEEF 220 (374)
T ss_dssp SGGGGHHHHHHHHTTTCSEEEEECTTTT----SCHHHHHHHHHHHHHHHCSSSEEEEECTTTT-CSHHHHHHHHHHSGGG
T ss_pred CHHHHHHHHHHHHHcCCCEEEeccCCCC----CCHHHHHHHHHHHHHHhCCCCeEEEECCCCC-CCHHHHHHHHHHhhhc
Confidence 3478888888888899999987544321 1146677889999887 46666544334333 4 3 334555666
Q ss_pred CCCeeecchhchHHHHhhhcCCCCCHHHHHHHHHHHHHhCCCCeEEEeeeeeCCCCHHHHHHHHHHHHhCCCCEEeeecc
Q 018731 206 GLDVFAHNIETVKRLQRIVRDPRAGYEQSLEVLKHAKLSKKGLITKSSIMLGLGESDDDLKEAMADLRSIDVDILTLGQY 285 (351)
Q Consensus 206 G~~~i~~~ies~~~~~~~~r~~~~~~~~~l~~i~~~~~~~~Gi~v~~~~IvGlgEt~e~~~~~l~~l~~lg~d~i~i~~~ 285 (351)
|++.|- - ++ +..++ +.++.+++. .++.+ -.+|+..+..+..+.+..-.+|.+.+-
T Consensus 221 ~i~~iE----q--P~------~~~~~----~~~~~l~~~-~~iPI------a~dE~~~~~~~~~~~l~~~~~d~v~~k-- 275 (374)
T 3sjn_A 221 NLNWIE----E--PV------LADSL----ISYEKLSRQ-VSQKI------AGGESLTTRYEFQEFITKSNADIVQPD-- 275 (374)
T ss_dssp CCSEEE----C--SS------CTTCH----HHHHHHHHH-CSSEE------EECTTCCHHHHHHHHHHHHCCSEECCB--
T ss_pred CceEEE----C--CC------CcccH----HHHHHHHhh-CCCCE------EeCCCcCCHHHHHHHHHcCCCCEEEeC--
Confidence 777662 1 11 12233 333444431 34443 235665555555556666677876662
Q ss_pred cCCCCCcccccCCCCHHHHHHHHHHHHhcCcceec
Q 018731 286 LQPTPLHLTVKEYVTPEKFDFWKAYGESIGFRYVA 320 (351)
Q Consensus 286 l~PTp~~~~~~~~v~~~e~~~~~~~~~~~G~~~~~ 320 (351)
++... ...+..++.++++..|...+.
T Consensus 276 --~~~~G-------Git~~~~ia~~A~~~gi~~~~ 301 (374)
T 3sjn_A 276 --ITRCG-------GITEMKKIYDIAQMNGTQLIP 301 (374)
T ss_dssp --TTTSS-------HHHHHHHHHHHHHHHTCEECC
T ss_pred --ccccC-------CHHHHHHHHHHHHHcCCEEEe
Confidence 22211 134566777777777776543
No 362
>1yxy_A Putative N-acetylmannosamine-6-phosphate 2-epimer; structural genomics, epimerase, PSI, structure initiative; 1.60A {Streptococcus pyogenes} SCOP: c.1.2.5
Probab=44.27 E-value=41 Score=28.57 Aligned_cols=68 Identities=13% Similarity=0.162 Sum_probs=42.4
Q ss_pred HHHHHhCCCcEE--EEeccCCCCCCCCcHHHHHHHHHHHHHhCCCcEEEEeecCCCCCHHHHHHHHHcCCCeeecc
Q 018731 140 AKAIASWGVDYI--VLTSVDRDDIPDGGSGHFARTVKAMKKQKPDIMVECLTSDFRGDLRAVETLVHSGLDVFAHN 213 (351)
Q Consensus 140 ~~~~~~~G~~~I--~ltgg~~~~l~~~~~~~~~~li~~ik~~~p~i~i~~~~~~~~~~~e~l~~L~~aG~~~i~~~ 213 (351)
+..+.+.|++.| .+.|.++......+ .. .++++.+++. ++.+.+ .++..+.+.+..+.++|++.+.++
T Consensus 146 a~~a~~~Gad~i~~~v~g~~~~~~~~~~-~~-~~~i~~~~~~--~ipvia--~GGI~s~~~~~~~~~~Gad~v~vG 215 (234)
T 1yxy_A 146 GLVAHQAGIDFVGTTLSGYTPYSRQEAG-PD-VALIEALCKA--GIAVIA--EGKIHSPEEAKKINDLGVAGIVVG 215 (234)
T ss_dssp HHHHHHTTCSEEECTTTTSSTTSCCSSS-CC-HHHHHHHHHT--TCCEEE--ESCCCSHHHHHHHHTTCCSEEEEC
T ss_pred HHHHHHcCCCEEeeeccccCCCCcCCCC-CC-HHHHHHHHhC--CCCEEE--ECCCCCHHHHHHHHHCCCCEEEEc
Confidence 556667899988 55554432110001 11 2555666654 455543 456556999999999999999876
No 363
>1r3s_A URO-D, uroporphyrinogen decarboxylase, UPD; uroporphyrinogen decarboxylase coproporphyrinogen, X-RAY crystallography, lyase; HET: 1CP; 1.65A {Homo sapiens} SCOP: c.1.22.1 PDB: 1r3t_A* 1r3r_A 1r3q_A* 1r3y_A* 1uro_A 3gvq_A 3gvr_A 1r3v_A* 3gvv_A 3gvw_A 1jph_A 1r3w_A* 3gw3_A 1jpi_A 1jpk_A 3gw0_A 2q71_A* 2q6z_A*
Probab=44.22 E-value=1.5e+02 Score=27.01 Aligned_cols=68 Identities=15% Similarity=0.165 Sum_probs=39.5
Q ss_pred HHHhCCCcEEEEeccCCCCCCCC-----cHHHHHHHHHHHH-HhCC----CcEEEEeecCCCCCHHHHHHHHHcCCCeee
Q 018731 142 AIASWGVDYIVLTSVDRDDIPDG-----GSGHFARTVKAMK-KQKP----DIMVECLTSDFRGDLRAVETLVHSGLDVFA 211 (351)
Q Consensus 142 ~~~~~G~~~I~ltgg~~~~l~~~-----~~~~~~~li~~ik-~~~p----~i~i~~~~~~~~~~~e~l~~L~~aG~~~i~ 211 (351)
...+.|++.|.+.....+.++.. -.+++.++++.++ +..| ++.+-....+ +...++.+++.|+|.++
T Consensus 205 ~~i~aGad~i~i~D~~~~~lsp~~f~ef~~p~~k~i~~~i~~~~~~~g~~~~p~i~~~~G---~~~~l~~l~~~g~d~i~ 281 (367)
T 1r3s_A 205 GQVVAGAQALQLFESHAGHLGPQLFNKFALPYIRDVAKQVKARLREAGLAPVPMIIFAKD---GHFALEELAQAGYEVVG 281 (367)
T ss_dssp HHHHTTCSEEEEEETTGGGSCHHHHHHHTHHHHHHHHHHHHHHHHHTTCCCCCEEEEETT---CGGGHHHHTTSSCSEEE
T ss_pred HHHHhCCCEEEEecCccccCCHHHHHHHhHHHHHHHHHHHhhhhccccCCCCCeEEEcCC---cHHHHHHHHhcCCCEEE
Confidence 34568999886632222223311 1356678888888 6522 2333222222 34688999999999886
Q ss_pred c
Q 018731 212 H 212 (351)
Q Consensus 212 ~ 212 (351)
+
T Consensus 282 ~ 282 (367)
T 1r3s_A 282 L 282 (367)
T ss_dssp C
T ss_pred e
Confidence 5
No 364
>2p10_A MLL9387 protein; putative phosphonopyruvate hydrolase, structural genomics, J center for structural genomics, JCSG; HET: MSE; 2.15A {Mesorhizobium loti} SCOP: c.1.12.9
Probab=44.18 E-value=1.3e+02 Score=26.73 Aligned_cols=94 Identities=11% Similarity=0.124 Sum_probs=50.9
Q ss_pred HHHHHHHHHHHHHhCCCcEEEEeecCCCCCHHHHHHHHHcCCCeeecchh-chHHHHhhhcCCCCCHHH----HHHHHHH
Q 018731 166 SGHFARTVKAMKKQKPDIMVECLTSDFRGDLRAVETLVHSGLDVFAHNIE-TVKRLQRIVRDPRAGYEQ----SLEVLKH 240 (351)
Q Consensus 166 ~~~~~~li~~ik~~~p~i~i~~~~~~~~~~~e~l~~L~~aG~~~i~~~ie-s~~~~~~~~r~~~~~~~~----~l~~i~~ 240 (351)
++...++++..++. ++--..++ .+++..+.+.++|.|.|....- |...+.-. +...+.++ +-+..+.
T Consensus 149 ~~~eve~I~~A~~~--gL~Ti~~v----~~~eeA~amA~agpDiI~~h~glT~gglIG~--~~avs~~~~~e~i~~i~~a 220 (286)
T 2p10_A 149 YAQEVEMIAEAHKL--DLLTTPYV----FSPEDAVAMAKAGADILVCHMGLTTGGAIGA--RSGKSMDDCVSLINECIEA 220 (286)
T ss_dssp HHHHHHHHHHHHHT--TCEECCEE----CSHHHHHHHHHHTCSEEEEECSCC-----------CCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHC--CCeEEEec----CCHHHHHHHHHcCCCEEEECCCCCCCCcccC--CCcccHHHhHHHHHHHHHH
Confidence 57778888888876 43211112 3889999999999999875432 11111100 11234444 3333444
Q ss_pred HHHhCCCCeEEEeeeeeC--CCCHHHHHHHHHH
Q 018731 241 AKLSKKGLITKSSIMLGL--GESDDDLKEAMAD 271 (351)
Q Consensus 241 ~~~~~~Gi~v~~~~IvGl--gEt~e~~~~~l~~ 271 (351)
+++..+++. ++.|= -.+.+|+...++.
T Consensus 221 ~~~vnpdvi----vLc~gGpIstpeDv~~~l~~ 249 (286)
T 2p10_A 221 ARTIRDDII----ILSHGGPIANPEDARFILDS 249 (286)
T ss_dssp HHHHCSCCE----EEEESTTCCSHHHHHHHHHH
T ss_pred HHHhCCCcE----EEecCCCCCCHHHHHHHHhc
Confidence 455445543 22222 2788998887754
No 365
>3l5a_A NADH/flavin oxidoreductase/NADH oxidase; OLD yellow enzyme family, OYE-like FMN-binding domain, TIM B oxidoreductase; HET: PGE; 1.65A {Staphylococcus aureus}
Probab=44.13 E-value=30 Score=32.76 Aligned_cols=79 Identities=10% Similarity=0.010 Sum_probs=49.5
Q ss_pred CchhHHHHHHHHHh-CCCcEEEEeccCCCC--C--CCCcHHHHHHHHHHHHHhCC-CcEEEEeecCCCCCHHHHHHHHHc
Q 018731 132 DPMEPENTAKAIAS-WGVDYIVLTSVDRDD--I--PDGGSGHFARTVKAMKKQKP-DIMVECLTSDFRGDLRAVETLVHS 205 (351)
Q Consensus 132 ~~eei~~~~~~~~~-~G~~~I~ltgg~~~~--l--~~~~~~~~~~li~~ik~~~p-~i~i~~~~~~~~~~~e~l~~L~~a 205 (351)
+.++..+.++.+.+ .|+..|.+++++... . ...+.....++++.+++... ++.|- ..+++.+.+.++.+.+.
T Consensus 262 ~~ed~~~la~~L~~~~Gvd~I~vs~g~~~~~~~~~~~~g~~~~~~~a~~Ik~~v~~~iPVI--~~GgI~t~e~Ae~~L~~ 339 (419)
T 3l5a_A 262 TIDEFNQLIDWVMDVSNIQYLAIASWGRHIYQNTSRTPGDHFGRPVNQIVYEHLAGRIPLI--ASGGINSPESALDALQH 339 (419)
T ss_dssp CHHHHHHHHHHHHHHSCCCCEEECCTTCCGGGCBCCCSSTTTTSBHHHHHHHHHTTSSCEE--ECSSCCSHHHHHHHGGG
T ss_pred CHHHHHHHHHHHHhhcCCcEEEEeeCCccccccccCCCCccccHHHHHHHHHHcCCCCeEE--EECCCCCHHHHHHHHHh
Confidence 45677888888888 999999998765300 0 00011112245566666543 34443 34555588888888888
Q ss_pred CCCeeecc
Q 018731 206 GLDVFAHN 213 (351)
Q Consensus 206 G~~~i~~~ 213 (351)
+|.|.++
T Consensus 340 -aDlVaiG 346 (419)
T 3l5a_A 340 -ADMVGMS 346 (419)
T ss_dssp -CSEEEES
T ss_pred -CCcHHHH
Confidence 9998876
No 366
>3eb2_A Putative dihydrodipicolinate synthetase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI2., structural genomics; HET: PGE; 2.04A {Rhodopseudomonas palustris} SCOP: c.1.10.0
Probab=44.07 E-value=19 Score=32.46 Aligned_cols=80 Identities=8% Similarity=0.011 Sum_probs=49.8
Q ss_pred CCCchhHHHHHHHHHhCCCcEEEEec--cCCCCCCCCcHHHHHHHHHHHHHhCC-Cc--EEEEeecCCCCCHHHHHHHHH
Q 018731 130 PPDPMEPENTAKAIASWGVDYIVLTS--VDRDDIPDGGSGHFARTVKAMKKQKP-DI--MVECLTSDFRGDLRAVETLVH 204 (351)
Q Consensus 130 ~~~~eei~~~~~~~~~~G~~~I~ltg--g~~~~l~~~~~~~~~~li~~ik~~~p-~i--~i~~~~~~~~~~~e~l~~L~~ 204 (351)
..+.+...+.++.+.+.|++.+++.| |+...|. .+.-.++++.+.+... .+ -+.+.+++....-+..+...+
T Consensus 21 ~iD~~~l~~lv~~li~~Gv~gl~v~GttGE~~~Ls---~~Er~~v~~~~~~~~~grvpviaGvg~~~t~~ai~la~~a~~ 97 (300)
T 3eb2_A 21 RVRADVMGRLCDDLIQAGVHGLTPLGSTGEFAYLG---TAQREAVVRATIEAAQRRVPVVAGVASTSVADAVAQAKLYEK 97 (300)
T ss_dssp CBCHHHHHHHHHHHHHTTCSCBBTTSGGGTGGGCC---HHHHHHHHHHHHHHHTTSSCBEEEEEESSHHHHHHHHHHHHH
T ss_pred CcCHHHHHHHHHHHHHcCCCEEEECccccCccccC---HHHHHHHHHHHHHHhCCCCcEEEeCCCCCHHHHHHHHHHHHH
Confidence 45677888999999999999988755 5544455 3555666666655422 22 233322221112356667778
Q ss_pred cCCCeeec
Q 018731 205 SGLDVFAH 212 (351)
Q Consensus 205 aG~~~i~~ 212 (351)
+|.|.+.+
T Consensus 98 ~Gadavlv 105 (300)
T 3eb2_A 98 LGADGILA 105 (300)
T ss_dssp HTCSEEEE
T ss_pred cCCCEEEE
Confidence 89999854
No 367
>1rd5_A Tryptophan synthase alpha chain, chloroplast; hydroxamic acid, diboa, dimboa, indole, indole-glycerol-PHOS lyase; 2.02A {Zea mays} SCOP: c.1.2.4 PDB: 1tjr_A
Probab=43.93 E-value=1.1e+02 Score=26.40 Aligned_cols=121 Identities=16% Similarity=0.136 Sum_probs=0.0
Q ss_pred CchhHHHHHHHHHhCCCcEEEEeccCCCCCCCC---------------cHHHHHHHHHHHHHhCCCcEEEEeecCCCCCH
Q 018731 132 DPMEPENTAKAIASWGVDYIVLTSVDRDDIPDG---------------GSGHFARTVKAMKKQKPDIMVECLTSDFRGDL 196 (351)
Q Consensus 132 ~~eei~~~~~~~~~~G~~~I~ltgg~~~~l~~~---------------~~~~~~~li~~ik~~~p~i~i~~~~~~~~~~~ 196 (351)
+.++..+.++.+.+.|++.|-+..--.+.+.|+ ..+...++++.+++. .++.+.++.-......
T Consensus 30 ~~~~~~~~~~~l~~~Gad~ielg~p~~dp~~dg~~i~~a~~~al~~g~~~~~~~~~i~~ir~~-~~~Pv~~m~~~~~~~~ 108 (262)
T 1rd5_A 30 DLATTAEALRLLDGCGADVIELGVPCSDPYIDGPIIQASVARALASGTTMDAVLEMLREVTPE-LSCPVVLLSYYKPIMF 108 (262)
T ss_dssp CHHHHHHHHHHHHHTTCSSEEEECCCSCCTTSCHHHHHHHHHHHTTTCCHHHHHHHHHHHGGG-CSSCEEEECCSHHHHS
T ss_pred CHHHHHHHHHHHHHcCCCEEEECCCCCCcccCCHHHHHHHHHHHHcCCCHHHHHHHHHHHHhc-CCCCEEEEecCcHHHH
Q ss_pred HHHHHHHHcCCCeeecchhchHHHHhhhcCCCCCHHHHHHHHHHHHHhCCCCeEEEeeeeeCCCCHHHHHHHHHH
Q 018731 197 RAVETLVHSGLDVFAHNIETVKRLQRIVRDPRAGYEQSLEVLKHAKLSKKGLITKSSIMLGLGESDDDLKEAMAD 271 (351)
Q Consensus 197 e~l~~L~~aG~~~i~~~ies~~~~~~~~r~~~~~~~~~l~~i~~~~~~~~Gi~v~~~~IvGlgEt~e~~~~~l~~ 271 (351)
..++.++++|++.+.+. ....++..+.++.+++ .|+. ..+.+....+.+.+......
T Consensus 109 ~~~~~a~~aGadgv~v~--------------d~~~~~~~~~~~~~~~--~g~~--~i~~~a~~t~~e~~~~~~~~ 165 (262)
T 1rd5_A 109 RSLAKMKEAGVHGLIVP--------------DLPYVAAHSLWSEAKN--NNLE--LVLLTTPAIPEDRMKEITKA 165 (262)
T ss_dssp CCTHHHHHTTCCEEECT--------------TCBTTTHHHHHHHHHH--TTCE--ECEEECTTSCHHHHHHHHHH
T ss_pred HHHHHHHHcCCCEEEEc--------------CCChhhHHHHHHHHHH--cCCc--eEEEECCCCCHHHHHHHHhc
No 368
>1m6j_A TIM, TPI, triosephosphate isomerase; asymmetry, monomer stability; 1.50A {Entamoeba histolytica} SCOP: c.1.1.1
Probab=43.80 E-value=59 Score=28.65 Aligned_cols=57 Identities=23% Similarity=0.200 Sum_probs=40.3
Q ss_pred HHHHHHHcCCCeeecchhchHHHHhhhcCCCCCHHHHHHHHHHHHHhCCCCeEEEeeeeeCCCCHHHHH
Q 018731 198 AVETLVHSGLDVFAHNIETVKRLQRIVRDPRAGYEQSLEVLKHAKLSKKGLITKSSIMLGLGESDDDLK 266 (351)
Q Consensus 198 ~l~~L~~aG~~~i~~~ies~~~~~~~~r~~~~~~~~~l~~i~~~~~~~~Gi~v~~~~IvGlgEt~e~~~ 266 (351)
-...|++.|++.+-+|- ..+|.+- +.+-+.+-+.++.+.+ .|+. .|+..|||.++..
T Consensus 86 S~~mL~d~G~~~ViiGH----SERR~~f--~Etd~~v~~Kv~~Al~--~GL~----pI~CvGEtleere 142 (261)
T 1m6j_A 86 HVGMLVDCQVPYVILGH----SERRQIF--HESNEQVAEKVKVAID--AGLK----VIACIGETEAQRI 142 (261)
T ss_dssp BHHHHHHTTCCEEEESC----HHHHHHS--CCCHHHHHHHHHHHHH--HTCE----EEEEECCCHHHHH
T ss_pred CHHHHHHcCCCEEEECc----hhhhccc--CCCHHHHHHHHHHHHH--CCCE----EEEEcCCcHHHHh
Confidence 45678899999998762 2233332 5677777778888888 8886 3566689988765
No 369
>1tz9_A Mannonate dehydratase; alpha-beta protein, structural genomics, PSI, protein struct initiative, northeast structural genomics consortium; 2.90A {Enterococcus faecalis} SCOP: c.1.15.6
Probab=43.61 E-value=68 Score=29.30 Aligned_cols=81 Identities=7% Similarity=0.120 Sum_probs=51.9
Q ss_pred CHHHHHHHHHc-CCCeeecchhchHHHHhhhcCCCCCHHHHHHHHHHHHHhCCCCeEEEeeeeeC--C-----------C
Q 018731 195 DLRAVETLVHS-GLDVFAHNIETVKRLQRIVRDPRAGYEQSLEVLKHAKLSKKGLITKSSIMLGL--G-----------E 260 (351)
Q Consensus 195 ~~e~l~~L~~a-G~~~i~~~ies~~~~~~~~r~~~~~~~~~l~~i~~~~~~~~Gi~v~~~~IvGl--g-----------E 260 (351)
+++.++.++++ |++.|-+.+.-... +...+.++..+..+.+.+ .|+.+.+ +..+ . +
T Consensus 23 ~~~~L~~i~~~~G~~~ve~~~~~~~~------g~~~~~~~~~~~~~~l~~--~GL~i~~--~~~~~~~~~~~~~~~~r~~ 92 (367)
T 1tz9_A 23 DAIPLKHIRQIPGITGVVGTLLNKLP------GDVWTVAEIQALKQSVEQ--EGLALLG--IESVAIHDAIKAGTDQRDH 92 (367)
T ss_dssp CCSCHHHHTTSTTCCEEEECCSSSCT------TCCCCHHHHHHHHHHHHH--TTCEEEE--ECSCCCCHHHHHTCSTHHH
T ss_pred ChHHHHHHhhcCCCCeEEecCCCCCC------CCCCCHHHHHHHHHHHHH--CCCeEEE--EecCCCcHHHhcCCcCHHH
Confidence 56789999999 99998654321100 012344555556666677 8998664 2222 1 1
Q ss_pred CHHHHHHHHHHHHhCCCCEEeeeccc
Q 018731 261 SDDDLKEAMADLRSIDVDILTLGQYL 286 (351)
Q Consensus 261 t~e~~~~~l~~l~~lg~d~i~i~~~l 286 (351)
..+.+.++++.+.++|+..+.+ +|.
T Consensus 93 ~i~~~~~~i~~a~~lG~~~v~~-n~~ 117 (367)
T 1tz9_A 93 YIDNYRQTLRNLGKCGISLVCY-SFK 117 (367)
T ss_dssp HHHHHHHHHHHHHHTTCCEEEE-CCC
T ss_pred HHHHHHHHHHHHHHcCCCEEEE-eCC
Confidence 2456678888999999998877 454
No 370
>2v5b_A Triosephosphate isomerase; TIM, unfolding, monotctim, glycosome, gluconeogenesis, lipid synthesis, monomeric mutant, glycolysis, pentose shunt; 2.00A {Trypanosoma cruzi}
Probab=43.55 E-value=1.6e+02 Score=25.49 Aligned_cols=58 Identities=17% Similarity=0.258 Sum_probs=41.4
Q ss_pred HHHHHHHHHcCCCeeecchhchHHHHhhhcCCCCCHHHHHHHHHHHHHhCCCCeEEEeeeeeCCCCHHHH
Q 018731 196 LRAVETLVHSGLDVFAHNIETVKRLQRIVRDPRAGYEQSLEVLKHAKLSKKGLITKSSIMLGLGESDDDL 265 (351)
Q Consensus 196 ~e~l~~L~~aG~~~i~~~ies~~~~~~~~r~~~~~~~~~l~~i~~~~~~~~Gi~v~~~~IvGlgEt~e~~ 265 (351)
.+....|+++|++.+-+|- ++ +|.+- +.+-+.+-+.++.+.+ .|+. .|+-.|||.++.
T Consensus 71 ~~~~~mL~d~G~~~ViiGH---SE-RR~~f--~Etd~~v~~Kv~~Al~--~GL~----pI~CvGEtleer 128 (244)
T 2v5b_A 71 ADALASLKDYGISWVVLGH---SE-RRLYY--GETNEIVAEKVAQACA--AGFH----VIVCVGETNEER 128 (244)
T ss_dssp HHHHHHHHHTTCCEEEECC---HH-HHHHS--CCCHHHHHHHHHHHHH--TTCE----EEEEECCCHHHH
T ss_pred CCCHHHHHHcCCCEEEeCc---hh-hhhcc--CCCHHHHHHHHHHHHH--CCCe----EEEEcCCcHHHH
Confidence 3449999999999998762 22 33332 4577777777888888 8986 356669998873
No 371
>3qja_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, T structural genomics consortium, TBSGC, lyase; 1.29A {Mycobacterium tuberculosis} PDB: 3t40_A* 3t44_A* 3t55_A* 3t78_A* 4fb7_A*
Probab=43.47 E-value=51 Score=29.18 Aligned_cols=67 Identities=12% Similarity=0.068 Sum_probs=41.5
Q ss_pred HHHHHhCCCcEEEEeccCCCCCCCCcHHHHHHHHHHHHHhCC-CcEEEEeecCCCCCHHHHHHHHHcCCCeeecc
Q 018731 140 AKAIASWGVDYIVLTSVDRDDIPDGGSGHFARTVKAMKKQKP-DIMVECLTSDFRGDLRAVETLVHSGLDVFAHN 213 (351)
Q Consensus 140 ~~~~~~~G~~~I~ltgg~~~~l~~~~~~~~~~li~~ik~~~p-~i~i~~~~~~~~~~~e~l~~L~~aG~~~i~~~ 213 (351)
++.+.+.|++.|.+++-+...+. .+.+.+ ..+.+..| ++.+-+ .++..+.+.+..+.++|++.+.+|
T Consensus 175 ~~~A~~~Gad~IGv~~r~l~~~~-~dl~~~----~~l~~~v~~~~pvVa--egGI~t~edv~~l~~~GadgvlVG 242 (272)
T 3qja_A 175 ADRALKAGAKVIGVNARDLMTLD-VDRDCF----ARIAPGLPSSVIRIA--ESGVRGTADLLAYAGAGADAVLVG 242 (272)
T ss_dssp HHHHHHHTCSEEEEESBCTTTCC-BCTTHH----HHHGGGSCTTSEEEE--ESCCCSHHHHHHHHHTTCSEEEEC
T ss_pred HHHHHHCCCCEEEECCCcccccc-cCHHHH----HHHHHhCcccCEEEE--ECCCCCHHHHHHHHHcCCCEEEEc
Confidence 33444669999988865432222 122333 34444444 455433 345557999999999999999886
No 372
>3toy_A Mandelate racemase/muconate lactonizing enzyme FA protein; enolase, magnesium binding site, lyase; HET: P4C; 1.80A {Bradyrhizobium SP} PDB: 3tte_A*
Probab=43.18 E-value=2e+02 Score=26.46 Aligned_cols=149 Identities=13% Similarity=0.044 Sum_probs=85.3
Q ss_pred CCchhHHHHHHHHHhC-CCcEEEEeccCCCCCCCCcHHHHHHHHHHHHHhC-CCcEEEEeecCCCCCH----HHHHHHHH
Q 018731 131 PDPMEPENTAKAIASW-GVDYIVLTSVDRDDIPDGGSGHFARTVKAMKKQK-PDIMVECLTSDFRGDL----RAVETLVH 204 (351)
Q Consensus 131 ~~~eei~~~~~~~~~~-G~~~I~ltgg~~~~l~~~~~~~~~~li~~ik~~~-p~i~i~~~~~~~~~~~----e~l~~L~~ 204 (351)
.+++++.+.++.+.+. |++.+-+--|..+ .+.-.+.++++++.. |++.+.+=.+.. .+. +.++.|.+
T Consensus 166 ~~~e~~~~~a~~~~~~~G~~~~KlKvG~~~------~~~d~~~v~avR~a~G~~~~l~vDaN~~-~~~~~A~~~~~~l~~ 238 (383)
T 3toy_A 166 LDARDDERTLRTACDEHGFRAIKSKGGHGD------LATDEAMIKGLRALLGPDIALMLDFNQS-LDPAEATRRIARLAD 238 (383)
T ss_dssp CCHHHHHHHHHHHHHTSCCCEEEEECCSSC------HHHHHHHHHHHHHHHCTTSEEEEECTTC-SCHHHHHHHHHHHGG
T ss_pred CCHHHHHHHHHHHHHccCCcEEEEecCCCC------HHHHHHHHHHHHHHhCCCCeEEEeCCCC-CCHHHHHHHHHHHHh
Confidence 3578888888888888 9999887544321 345567888888864 666654422333 243 34566666
Q ss_pred cCCCeeecchhchHHHHhhhcCCCCCHHHHHHHHHHHHHhCCCCeEEEeeeeeCCCCHHHHHHHHHHHHhCCCCEEeeec
Q 018731 205 SGLDVFAHNIETVKRLQRIVRDPRAGYEQSLEVLKHAKLSKKGLITKSSIMLGLGESDDDLKEAMADLRSIDVDILTLGQ 284 (351)
Q Consensus 205 aG~~~i~~~ies~~~~~~~~r~~~~~~~~~l~~i~~~~~~~~Gi~v~~~~IvGlgEt~e~~~~~l~~l~~lg~d~i~i~~ 284 (351)
.|+..| |- ++ +..+++ .++.+++. .++.+ -.+|+..+..+..+.+..-.+|.+.+.
T Consensus 239 ~~i~~i----Ee--P~------~~~d~~----~~~~l~~~-~~iPI------a~dE~~~~~~~~~~~i~~~a~d~v~ik- 294 (383)
T 3toy_A 239 YDLTWI----EE--PV------PQENLS----GHAAVRER-SEIPI------QAGENWWFPRGFAEAIAAGASDFIMPD- 294 (383)
T ss_dssp GCCSEE----EC--CS------CTTCHH----HHHHHHHH-CSSCE------EECTTCCHHHHHHHHHHHTCCSEECCC-
T ss_pred hCCCEE----EC--CC------CcchHH----HHHHHHhh-cCCCE------EeCCCcCCHHHHHHHHHcCCCCEEEeC-
Confidence 777765 21 11 122433 33344331 34443 235665555555555656667776662
Q ss_pred ccCCCCCcccccCCCCHHHHHHHHHHHHhcCcceec
Q 018731 285 YLQPTPLHLTVKEYVTPEKFDFWKAYGESIGFRYVA 320 (351)
Q Consensus 285 ~l~PTp~~~~~~~~v~~~e~~~~~~~~~~~G~~~~~ 320 (351)
++... ...+..++.++++..|...+.
T Consensus 295 ---~~~~G-------Git~~~~ia~~A~~~gi~~~~ 320 (383)
T 3toy_A 295 ---LMKVG-------GITGWLNVAGQADAASIPMSS 320 (383)
T ss_dssp ---TTTTT-------HHHHHHHHHHHHHHHTCCBCC
T ss_pred ---ccccC-------CHHHHHHHHHHHHHcCCEEee
Confidence 22211 134567777788888876543
No 373
>3r8r_A Transaldolase; pentose phosphate pathway, schiff bases; 1.90A {Bacillus subtilis}
Probab=43.12 E-value=49 Score=28.19 Aligned_cols=75 Identities=16% Similarity=0.204 Sum_probs=47.0
Q ss_pred HHhCCCcEEEEeccCCCCCCCCcHHHHHHHHHHHHHhCCCcEEEEeecCCCCCHHHHHHHHHcCCCeeecchhchHHH
Q 018731 143 IASWGVDYIVLTSVDRDDIPDGGSGHFARTVKAMKKQKPDIMVECLTSDFRGDLRAVETLVHSGLDVFAHNIETVKRL 220 (351)
Q Consensus 143 ~~~~G~~~I~ltgg~~~~l~~~~~~~~~~li~~ik~~~p~i~i~~~~~~~~~~~e~l~~L~~aG~~~i~~~ies~~~~ 220 (351)
..+.|+.+|.---|--++..+.+.+.+.++.+.++.+..+..| +...+. +...+.....+|+|.+.+..+-++++
T Consensus 119 Aa~AGa~yISPfvgRi~d~~~dG~~~v~~i~~~~~~~~~~t~i--laAS~R-~~~~v~~~a~~G~d~~Tip~~vl~~l 193 (212)
T 3r8r_A 119 AARAGATYVSPFLGRLDDIGHNGLDLISEVKQIFDIHGLDTQI--IAASIR-HPQHVTEAALRGAHIGTMPLKVIHAL 193 (212)
T ss_dssp HHHHTCSEEEEBHHHHHHTTSCHHHHHHHHHHHHHHHTCCCEE--EEBSCC-SHHHHHHHHHTTCSEEEECHHHHHHH
T ss_pred HHHcCCeEEEeccchhhhcCCChHHHHHHHHHHHHHcCCCCEE--EEecCC-CHHHHHHHHHcCCCEEEcCHHHHHHH
Confidence 3456777774311211223333567777888888877444443 334454 77888888899999999876666554
No 374
>3otr_A Enolase; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta barrel, TIM barrel; 2.75A {Toxoplasma gondii}
Probab=42.78 E-value=2.3e+02 Score=27.00 Aligned_cols=123 Identities=11% Similarity=0.175 Sum_probs=74.5
Q ss_pred CCchhHHHHHHHHH-hCCCcEEEEeccCCCCCCCCcHHHHHHHHHHHHHhCCCcEEEEeecC-CCCCHHHHHHHHHcC-C
Q 018731 131 PDPMEPENTAKAIA-SWGVDYIVLTSVDRDDIPDGGSGHFARTVKAMKKQKPDIMVECLTSD-FRGDLRAVETLVHSG-L 207 (351)
Q Consensus 131 ~~~eei~~~~~~~~-~~G~~~I~ltgg~~~~l~~~~~~~~~~li~~ik~~~p~i~i~~~~~~-~~~~~e~l~~L~~aG-~ 207 (351)
++++|..+..+.+. +.+ -++| -+| +...+++.+.++-+.+.. .+.|. ..+ +..+.+.++...+.+ +
T Consensus 281 ~t~~Elid~y~~lle~yp--Iv~I--EDP--l~~dD~eg~a~Lt~~lg~---~iqIv--GDDl~vTn~~~i~~~Ie~~a~ 349 (452)
T 3otr_A 281 LTGEKLKEVYEGWLKKYP--IISV--EDP--FDQDDFASFSAFTKDVGE---KTQVI--GDDILVTNILRIEKALKDKAC 349 (452)
T ss_dssp ECHHHHHHHHHHHHHHSC--EEEE--ECC--SCTTCHHHHHHHHHHHTT---TSEEE--ESTTTTTCHHHHHHHHHHTCC
T ss_pred ccHHHHHHHHHHHHhhhC--ceEE--ecC--CChhhHHHHHHHHHhhCC---CeEEE--eCccccCCHHHHHHHHhcCCC
Confidence 46777777776543 343 3334 233 444446667666655532 25552 233 234566666655544 6
Q ss_pred CeeecchhchHHHHhhhcCCCCCHHHHHHHHHHHHHhCCCCeEEEeeeeeC--CCCHHHHHHHHHHHHhCCCCEEeee
Q 018731 208 DVFAHNIETVKRLQRIVRDPRAGYEQSLEVLKHAKLSKKGLITKSSIMLGL--GESDDDLKEAMADLRSIDVDILTLG 283 (351)
Q Consensus 208 ~~i~~~ies~~~~~~~~r~~~~~~~~~l~~i~~~~~~~~Gi~v~~~~IvGl--gEt~e~~~~~l~~l~~lg~d~i~i~ 283 (351)
|.+.+.+ .+ -.+.-+.+++++.+++ .|+. +|+|. |||.+.+...+ ...++...+-.+
T Consensus 350 n~IlIKv------nQ-----IGgITEalka~~lA~~--~G~~----vmvshrSGETeD~~iAdL--aVgl~~gqIKtG 408 (452)
T 3otr_A 350 NCLLLKV------NQ-----IGSVTEAIEACLLAQK--SGWG----VQVSHRSGETEDSFIADL--VVGLRCGQIKSG 408 (452)
T ss_dssp SEEEECH------HH-----HCCHHHHHHHHHHHHH--TTCE----EEEECCSSCCSCCHHHHH--HHHTTCCEEECC
T ss_pred CEEEeec------cc-----cccHHHHHHHHHHHHH--cCCe----EEEeCCCCCCchhHHHHH--HHHcCCCccccC
Confidence 6665432 11 3488899999999999 8876 57777 99998876544 456666665554
No 375
>3o0f_A Putative metal-dependent phosphoesterase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: AMP; 1.94A {Bifidobacterium adolescentis} PDB: 3e0f_A*
Probab=42.42 E-value=87 Score=28.14 Aligned_cols=100 Identities=12% Similarity=0.060 Sum_probs=48.0
Q ss_pred HHHHHHHHHcCCCeeecchhchHHHHhhhcCCCCCHHHHHHHHHHHHHhCCCCeEEEeeeeeCCCCHHHHHHHHHHHHhC
Q 018731 196 LRAVETLVHSGLDVFAHNIETVKRLQRIVRDPRAGYEQSLEVLKHAKLSKKGLITKSSIMLGLGESDDDLKEAMADLRSI 275 (351)
Q Consensus 196 ~e~l~~L~~aG~~~i~~~ies~~~~~~~~r~~~~~~~~~l~~i~~~~~~~~Gi~v~~~~IvGlgEt~e~~~~~l~~l~~l 275 (351)
++.++.++++|--.|.-..+. +...+ ...+ . +.++.+++ .|+. ..-+..+ +.+.++.....+++++.
T Consensus 186 ~eaI~~I~~aGGvaVLAHP~r----~~~~r-~~~~-~---~~l~~l~~--~Gld-gIEv~~~-~~~~~~~~~~~~lA~~~ 252 (301)
T 3o0f_A 186 HEVIAAVKGAGGVVVAAHAGD----PQRNR-RLLS-D---EQLDAMIA--DGLD-GLEVWHR-GNPPEQRERLLTIAARH 252 (301)
T ss_dssp HHHHHHHHHTTCEEEECSTTC----TTTCS-SCCC-H---HHHHHHHH--HTCC-EEEEEST-TSCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHCCCEEEecChhh----hcccc-ccCc-H---HHHHHHHH--CCCC-EEEEeCC-CCCHHHHHHHHHHHHHc
Confidence 578888888876554322111 11000 0112 2 33445555 5653 2222222 66788888888888888
Q ss_pred CCCEEeeecccCC-CCCcccccCCCCHHHHHHHHH
Q 018731 276 DVDILTLGQYLQP-TPLHLTVKEYVTPEKFDFWKA 309 (351)
Q Consensus 276 g~d~i~i~~~l~P-Tp~~~~~~~~v~~~e~~~~~~ 309 (351)
++-...=+-|=.| .+... -...++++.++.+.+
T Consensus 253 gL~~tgGSD~Hg~~~~~~l-G~~~~~~~~~~~l~~ 286 (301)
T 3o0f_A 253 DLLVTGGSDWHGKGKPNGL-GENLTDDDTVREILC 286 (301)
T ss_dssp TCEEEECCCBCGGGSSCCT-TSSCBCHHHHHHHHH
T ss_pred CCceEEEcCCCCCCCCCcC-CCcCCCHHHHHHHHH
Confidence 7633221112122 11111 123456666666554
No 376
>2f6u_A GGGPS, (S)-3-O-geranylgeranylglyceryl phosphate synthase; non-canonical TIM-barrel, prenyltransferase, archaeal lipid synthesis, dimer; HET: CIT; 1.55A {Archaeoglobus fulgidus} SCOP: c.1.4.1 PDB: 2f6x_A*
Probab=42.32 E-value=1.7e+02 Score=25.22 Aligned_cols=72 Identities=10% Similarity=-0.062 Sum_probs=46.7
Q ss_pred CchhHHHHHHHHH-hCCCcEEEEeccCCCCCCCCcHHHHHHHHHHHHHhCCCcEEEEeecCCCCCHHHHHHHHHcCCCee
Q 018731 132 DPMEPENTAKAIA-SWGVDYIVLTSVDRDDIPDGGSGHFARTVKAMKKQKPDIMVECLTSDFRGDLRAVETLVHSGLDVF 210 (351)
Q Consensus 132 ~~eei~~~~~~~~-~~G~~~I~ltgg~~~~l~~~~~~~~~~li~~ik~~~p~i~i~~~~~~~~~~~e~l~~L~~aG~~~i 210 (351)
+++.+...++... ..|...|++.+ ... . ...++++.+++..+++.+.+ ..+..+.+.++.+.+ |.|.+
T Consensus 147 ~~e~~~~~a~~g~~~l~~~~Vyl~~-~G~--~-----~~~~~i~~i~~~~~~~Pv~v--GgGI~s~e~a~~~~~-gAd~V 215 (234)
T 2f6u_A 147 DKELAASYALVGEKLFNLPIIYIEY-SGT--Y-----GNPELVAEVKKVLDKARLFY--GGGIDSREKAREMLR-YADTI 215 (234)
T ss_dssp CHHHHHHHHHHHHHTTCCSEEEEEC-TTS--C-----CCHHHHHHHHHHCSSSEEEE--ESCCCSHHHHHHHHH-HSSEE
T ss_pred CHHHHHHHHHhhhhhcCCCEEEEeC-CCC--c-----chHHHHHHHHHhCCCCCEEE--EecCCCHHHHHHHHh-CCCEE
Confidence 4444555555444 24668888866 321 1 13567777887643556543 456678999999999 99999
Q ss_pred ecch
Q 018731 211 AHNI 214 (351)
Q Consensus 211 ~~~i 214 (351)
.+|-
T Consensus 216 IVGS 219 (234)
T 2f6u_A 216 IVGN 219 (234)
T ss_dssp EECH
T ss_pred EECh
Confidence 8763
No 377
>1hjs_A Beta-1,4-galactanase; 4-galactanases, family 53 glycoside hydrolase, thermostability, PH optimum, CLAN GH-A, thermophIle, alkalophIle; HET: NAG EPE; 1.87A {Thielavia heterothallica} SCOP: c.1.8.3 PDB: 1hju_A* 1hjq_A*
Probab=42.31 E-value=1.9e+02 Score=26.01 Aligned_cols=136 Identities=15% Similarity=0.080 Sum_probs=72.2
Q ss_pred HHHHhCCCcEEEEe-ccCCCCCCCCcHHHHHHHHHHHHHhCCCcEEEEee------cC-------CCCC-----------
Q 018731 141 KAIASWGVDYIVLT-SVDRDDIPDGGSGHFARTVKAMKKQKPDIMVECLT------SD-------FRGD----------- 195 (351)
Q Consensus 141 ~~~~~~G~~~I~lt-gg~~~~l~~~~~~~~~~li~~ik~~~p~i~i~~~~------~~-------~~~~----------- 195 (351)
+.+++.|+..|-+. -++|. -.....+++.++++..++..-.+.+..-- |+ ...+
T Consensus 34 ~ilk~~G~N~VRi~~w~~P~-~g~~~~~~~~~~~~~A~~~GlkV~ld~Hysd~WadPg~Q~~p~~W~~~~~~~~~~~~~y 112 (332)
T 1hjs_A 34 NILAANGVNTVRQRVWVNPA-DGNYNLDYNIAIAKRAKAAGLGVYIDFHYSDTWADPAHQTMPAGWPSDIDNLSWKLYNY 112 (332)
T ss_dssp HHHHHTTCCEEEEEECSSCT-TCTTSHHHHHHHHHHHHHTTCEEEEEECCSSSCCBTTBCBCCTTCCCSHHHHHHHHHHH
T ss_pred HHHHHCCCCEEEEeeeeCCC-CCcCCHHHHHHHHHHHHHCCCEEEEEeccCCCcCCccccCCccccccchHHHHHHHHHH
Confidence 34567899988763 23331 01113678888998888873223333211 11 1101
Q ss_pred -HHHHHHHHHcC--CCeeecchhchHHHH-hhhcCCCCCHHHHHH----HHHHHHHhC--CCCeEEEeeeeeC--CCCHH
Q 018731 196 -LRAVETLVHSG--LDVFAHNIETVKRLQ-RIVRDPRAGYEQSLE----VLKHAKLSK--KGLITKSSIMLGL--GESDD 263 (351)
Q Consensus 196 -~e~l~~L~~aG--~~~i~~~ies~~~~~-~~~r~~~~~~~~~l~----~i~~~~~~~--~Gi~v~~~~IvGl--gEt~e 263 (351)
.+.++.|++.| ++.+.++.|....+. .. +...+++...+ .++.+|+.. ++.. +++.+ |.+.+
T Consensus 113 t~~vl~~l~~~g~~~~~v~vGNEi~~g~~w~~--g~~~~~~~~~~l~~~~~~avR~~~~~p~~~----v~ih~~~~~~~~ 186 (332)
T 1hjs_A 113 TLDAANKLQNAGIQPTIVSIGNEIRAGLLWPT--GRTENWANIARLLHSAAWGIKDSSLSPKPK----IMIHLDNGWDWG 186 (332)
T ss_dssp HHHHHHHHHHTTCCCSEEEESSSGGGEETBTT--EETTCHHHHHHHHHHHHHHHHTSCCSSCCE----EEEEESCTTCHH
T ss_pred HHHHHHHHHHcCCCCCEEEEeecccccccCcC--CCccCHHHHHHHHHHHHHHHHHhccCCCCe----EEEEeCCccchH
Confidence 26788888877 566777777654321 00 00113333222 344456544 3333 34444 55666
Q ss_pred HHHHHHHHHHhCC------CCEEeee
Q 018731 264 DLKEAMADLRSID------VDILTLG 283 (351)
Q Consensus 264 ~~~~~l~~l~~lg------~d~i~i~ 283 (351)
.+..-++.+.+.| +|.|.++
T Consensus 187 ~~~~~~d~~~~~g~~~~~~~DvIG~s 212 (332)
T 1hjs_A 187 TQNWWYTNVLKQGTLELSDFDMMGVS 212 (332)
T ss_dssp HHHHHHHHHHTTSSSCGGGCCEEEEE
T ss_pred HHHHHHHHHHhcCCCCCCCcCEEEEe
Confidence 6666667666555 7888885
No 378
>3paj_A Nicotinate-nucleotide pyrophosphorylase, carboxyl; TIM barrel, pyridin dicarboxylate, 5-phospho-alpha-D-ribose 1-diphosphate; 2.00A {Vibrio cholerae o1 biovar el tor}
Probab=42.22 E-value=1.4e+02 Score=26.98 Aligned_cols=86 Identities=21% Similarity=0.282 Sum_probs=51.5
Q ss_pred HHHHHHHHHHhCCCcEEEEeecCCCCCHHHHHHHHHcCCCeeecchhchHHHHhhhcCCCCCHHHHHHHHHHHHHhCCCC
Q 018731 169 FARTVKAMKKQKPDIMVECLTSDFRGDLRAVETLVHSGLDVFAHNIETVKRLQRIVRDPRAGYEQSLEVLKHAKLSKKGL 248 (351)
Q Consensus 169 ~~~li~~ik~~~p~i~i~~~~~~~~~~~e~l~~L~~aG~~~i~~~ies~~~~~~~~r~~~~~~~~~l~~i~~~~~~~~Gi 248 (351)
+.+.++..++..|+..|++... +.+.++...++|+|.|.+. ..+.++..++++.+. ..+
T Consensus 218 i~~Av~~ar~~~p~~kIeVEVd----tldea~eAl~aGaD~I~LD--------------n~~~~~l~~av~~l~---~~v 276 (320)
T 3paj_A 218 IRQAISTAKQLNPGKPVEVETE----TLAELEEAISAGADIIMLD--------------NFSLEMMREAVKINA---GRA 276 (320)
T ss_dssp HHHHHHHHHHHSTTSCEEEEES----SHHHHHHHHHTTCSEEEEE--------------SCCHHHHHHHHHHHT---TSS
T ss_pred HHHHHHHHHHhCCCCeEEEEEC----CHHHHHHHHHcCCCEEEEC--------------CCCHHHHHHHHHHhC---CCC
Confidence 3466777777777766655443 4466777778999988552 234555555555443 233
Q ss_pred eEEEeeeeeCCCCHHHHHHHHHHHHhCCCCEEeee
Q 018731 249 ITKSSIMLGLGESDDDLKEAMADLRSIDVDILTLG 283 (351)
Q Consensus 249 ~v~~~~IvGlgEt~e~~~~~l~~l~~lg~d~i~i~ 283 (351)
.+. .-| |-|.+.+ ..+.+.|+|.+.++
T Consensus 277 ~ie---aSG-GIt~~~I----~~~a~tGVD~isvG 303 (320)
T 3paj_A 277 ALE---NSG-NITLDNL----KECAETGVDYISVG 303 (320)
T ss_dssp EEE---EES-SCCHHHH----HHHHTTTCSEEECT
T ss_pred eEE---EEC-CCCHHHH----HHHHHcCCCEEEEC
Confidence 321 112 5565555 44557999999986
No 379
>2l69_A Rossmann 2X3 fold protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Artificial gene}
Probab=42.21 E-value=98 Score=22.60 Aligned_cols=49 Identities=8% Similarity=0.152 Sum_probs=33.4
Q ss_pred CCHHHHHHHHHHHHHhCCCCeEEEeeeeeCCCCHHHHHHHHHHHHhCCCCEEee
Q 018731 229 AGYEQSLEVLKHAKLSKKGLITKSSIMLGLGESDDDLKEAMADLRSIDVDILTL 282 (351)
Q Consensus 229 ~~~~~~l~~i~~~~~~~~Gi~v~~~~IvGlgEt~e~~~~~l~~l~~lg~d~i~i 282 (351)
.+.++..+.++.+.+ . .++.+++-.-+..|=....+++++.+|...+-+
T Consensus 33 rspqelkdsieelvk---k--ynativvvvvddkewaekairfvkslgaqvlii 81 (134)
T 2l69_A 33 RSPQELKDSIEELVK---K--YNATIVVVVVDDKEWAEKAIRFVKSLGAQVLII 81 (134)
T ss_dssp CSHHHHHHHHHHHTT---C--CCCEEEEEECSSHHHHHHHHHHHHHHCCCCEEE
T ss_pred cCHHHHHHHHHHHHH---H--hCCeEEEEEEccHHHHHHHHHHHHhcCCeEEEE
Confidence 377788888888765 1 234444434556666678899999999886555
No 380
>4ef8_A Dihydroorotate dehydrogenase; phenyl isothiocyanate, PYRD, oxidoreductase, oxidoreductase-oxidor inhibitor complex; HET: FMN; 1.56A {Leishmania major} PDB: 3gye_A* 3gz3_A* 4ef9_A* 3tro_A* 3tjx_A*
Probab=41.95 E-value=71 Score=29.43 Aligned_cols=113 Identities=8% Similarity=-0.047 Sum_probs=60.8
Q ss_pred CCcHHHHHHHHHHHHHhCCCcEEEEeecCCCCC----HHHHHHHH---HcCCCeeecchhchHHHHhhhcCCCCCHHHHH
Q 018731 163 DGGSGHFARTVKAMKKQKPDIMVECLTSDFRGD----LRAVETLV---HSGLDVFAHNIETVKRLQRIVRDPRAGYEQSL 235 (351)
Q Consensus 163 ~~~~~~~~~li~~ik~~~p~i~i~~~~~~~~~~----~e~l~~L~---~aG~~~i~~~ies~~~~~~~~r~~~~~~~~~l 235 (351)
+.+.+.+.+-++.+++ .++..+-+...+. + .+.++.+. ++|+|.|-+|+-+-+... .+.-..+.+...
T Consensus 108 n~G~~~~~~~l~~~~~-~~~~pvivsI~G~--~~~d~~~~a~~l~~~~~~g~d~ielNisCPn~~g--g~~l~~~~e~~~ 182 (354)
T 4ef8_A 108 NNGFDFYLAYAAEQHD-YGKKPLFLSMSGL--SMRENVEMCKRLAAVATEKGVILELNLSCPNVPG--KPQVAYDFDAMR 182 (354)
T ss_dssp BCCHHHHHHHHHHTCC-TTTCCEEEEECCS--SHHHHHHHHHHHHHHHHHHCCEEEEECSSCCSTT--SCCGGGSHHHHH
T ss_pred CcCHHHHHHHHHHHhh-cCCCcEEEEeccC--CHHHHHHHHHHHhhhhhcCCCEEEEeCCCCCCCC--chhhccCHHHHH
Confidence 3456666665554432 2343332221111 2 23455555 567888877764422210 010123556666
Q ss_pred HHHHHHHHhCCCCeEEEeeeeeCCCCHHHHHHHHHHHHhCC-CCEEeee
Q 018731 236 EVLKHAKLSKKGLITKSSIMLGLGESDDDLKEAMADLRSID-VDILTLG 283 (351)
Q Consensus 236 ~~i~~~~~~~~Gi~v~~~~IvGlgEt~e~~~~~l~~l~~lg-~d~i~i~ 283 (351)
+.++.+++. ..+.+..-+-.+ .+.+++.+.++.+.+.| +|.+.+.
T Consensus 183 ~il~av~~~-~~~PV~vKi~p~--~d~~~~~~~a~~~~~~Gg~d~I~~~ 228 (354)
T 4ef8_A 183 QCLTAVSEV-YPHSFGVKMPPY--FDFAHFDAAAEILNEFPKVQFITCI 228 (354)
T ss_dssp HHHHHHHHH-CCSCEEEEECCC--CSHHHHHHHHHHHHTCTTEEEEEEC
T ss_pred HHHHHHHHh-hCCCeEEEecCC--CCHHHHHHHHHHHHhCCCccEEEEe
Confidence 666666652 345544444344 46888888888888998 9987753
No 381
>3jr2_A Hexulose-6-phosphate synthase SGBH; 3-keto-L-gulonate-6-phosphate decarboxylase, ULAD, niaid,CSG bound, biosynthetic protein; HET: MSE; 1.80A {Vibrio cholerae} SCOP: c.1.2.0 PDB: 3ieb_A*
Probab=41.88 E-value=1.5e+02 Score=24.69 Aligned_cols=147 Identities=12% Similarity=0.036 Sum_probs=76.3
Q ss_pred CchhHHHHHHHHHhCCCcEEEEeccCCCCCCCCcHHHHHHHHHHHHHhCCCcEEEEeecCCCCCHHHHHHHHHcCCCeee
Q 018731 132 DPMEPENTAKAIASWGVDYIVLTSVDRDDIPDGGSGHFARTVKAMKKQKPDIMVECLTSDFRGDLRAVETLVHSGLDVFA 211 (351)
Q Consensus 132 ~~eei~~~~~~~~~~G~~~I~ltgg~~~~l~~~~~~~~~~li~~ik~~~p~i~i~~~~~~~~~~~e~l~~L~~aG~~~i~ 211 (351)
+.++..+.++.+ ..|+.-+-+ |.+..+ ..=.++++.+++.+++..+-.-..-.......++.+.++|+|.+.
T Consensus 17 ~~~~~~~~~~~~-~~~vd~ie~--g~~~~~-----~~G~~~i~~lr~~~~~~~i~ld~~l~d~p~~~~~~~~~aGad~i~ 88 (218)
T 3jr2_A 17 NLTDAVAVASNV-ASYVDVIEV--GTILAF-----AEGMKAVSTLRHNHPNHILVCDMKTTDGGAILSRMAFEAGADWIT 88 (218)
T ss_dssp SHHHHHHHHHHH-GGGCSEEEE--CHHHHH-----HHTTHHHHHHHHHCTTSEEEEEEEECSCHHHHHHHHHHHTCSEEE
T ss_pred CHHHHHHHHHHh-cCCceEEEe--CcHHHH-----hcCHHHHHHHHHhCCCCcEEEEEeecccHHHHHHHHHhcCCCEEE
Confidence 345666666664 446665544 222111 222467888888766644321111011123568999999999997
Q ss_pred cchhchHHHHhhhcCCCCCHHHHHHHHHHHHHhCCCCeEEEeeeeeCCCCHHHHHHHHHHHHhCCCCEEeeecccCCCCC
Q 018731 212 HNIETVKRLQRIVRDPRAGYEQSLEVLKHAKLSKKGLITKSSIMLGLGESDDDLKEAMADLRSIDVDILTLGQYLQPTPL 291 (351)
Q Consensus 212 ~~ies~~~~~~~~r~~~~~~~~~l~~i~~~~~~~~Gi~v~~~~IvGlgEt~e~~~~~l~~l~~lg~d~i~i~~~l~PTp~ 291 (351)
+..++..+ ...+.++.+++ .|+....+ ++|. .|.++..+. .+.|+|.+.+.....| .
T Consensus 89 vh~~~~~~-------------~~~~~~~~~~~--~g~~~~~d-~l~~-~T~~~~~~~----~~~g~d~v~~~~~~~~--~ 145 (218)
T 3jr2_A 89 VSAAAHIA-------------TIAACKKVADE--LNGEIQIE-IYGN-WTMQDAKAW----VDLGITQAIYHRSRDA--E 145 (218)
T ss_dssp EETTSCHH-------------HHHHHHHHHHH--HTCEEEEE-CCSS-CCHHHHHHH----HHTTCCEEEEECCHHH--H
T ss_pred EecCCCHH-------------HHHHHHHHHHH--hCCcccee-eeec-CCHHHHHHH----HHcCccceeeeecccc--c
Confidence 65443211 12344556666 67753222 4444 365544433 4558997665211111 1
Q ss_pred cccccCCCCHHHHHHHHHHH
Q 018731 292 HLTVKEYVTPEKFDFWKAYG 311 (351)
Q Consensus 292 ~~~~~~~v~~~e~~~~~~~~ 311 (351)
. ......++++.++++..
T Consensus 146 ~--~g~~~~~~~l~~i~~~~ 163 (218)
T 3jr2_A 146 L--AGIGWTTDDLDKMRQLS 163 (218)
T ss_dssp H--HTCCSCHHHHHHHHHHH
T ss_pred c--CCCcCCHHHHHHHHHHh
Confidence 1 01123677788887764
No 382
>1yx1_A Hypothetical protein PA2260; structural genomics, PSI, PROT structure initiative; HET: MSE; 1.80A {Pseudomonas aeruginosa PAO1} SCOP: c.1.15.7
Probab=41.81 E-value=58 Score=27.92 Aligned_cols=20 Identities=10% Similarity=0.215 Sum_probs=9.7
Q ss_pred HHHHHHHHHHHhCCCCEEee
Q 018731 263 DDLKEAMADLRSIDVDILTL 282 (351)
Q Consensus 263 e~~~~~l~~l~~lg~d~i~i 282 (351)
+.+.+.++.+.++|+..+.+
T Consensus 84 ~~~~~~i~~A~~lGa~~v~~ 103 (264)
T 1yx1_A 84 PELEPTLRRAEACGAGWLKV 103 (264)
T ss_dssp TTHHHHHHHHHHTTCSEEEE
T ss_pred HHHHHHHHHHHHcCCCEEEE
Confidence 44445555555555554443
No 383
>2btm_A TIM, protein (triosephosphate isomerase); thermophilic triose-phosphate, glycolysis; 2.40A {Geobacillus stearothermophilus} SCOP: c.1.1.1 PDB: 1btm_A
Probab=41.65 E-value=63 Score=28.32 Aligned_cols=57 Identities=19% Similarity=0.123 Sum_probs=39.1
Q ss_pred HHHHHHHcCCCeeecchhchHHHHhhhcCCCCCHHHHHHHHHHHHHhCCCCeEEEeeeeeCCCCHHHHH
Q 018731 198 AVETLVHSGLDVFAHNIETVKRLQRIVRDPRAGYEQSLEVLKHAKLSKKGLITKSSIMLGLGESDDDLK 266 (351)
Q Consensus 198 ~l~~L~~aG~~~i~~~ies~~~~~~~~r~~~~~~~~~l~~i~~~~~~~~Gi~v~~~~IvGlgEt~e~~~ 266 (351)
-...|+++|++.+-+|- ..+|.+- +.+-+.+-+.++.+.+ .|+. .|+..|||.++..
T Consensus 78 S~~mL~d~G~~~ViiGH----SERR~~f--~Etd~~v~~Kv~~Al~--~GL~----pI~CvGEtleere 134 (252)
T 2btm_A 78 SPVMLKDLGVTYVILGH----SERRQMF--AETDETVNKKVLAAFT--RGLI----PIICCGESLEERE 134 (252)
T ss_dssp CHHHHHHHTCCEEEESC----HHHHHHS--CCCHHHHHHHHHHHHH--HTCE----EEEEECCCHHHHH
T ss_pred CHHHHHHcCCCEEEeCc----hhccccc--CCCHHHHHHHHHHHHH--CCCE----EEEEcCCcHHHHh
Confidence 35668889999988762 2223332 4566677777888888 8886 3566689988653
No 384
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=41.64 E-value=1.6e+02 Score=27.43 Aligned_cols=84 Identities=11% Similarity=0.092 Sum_probs=48.8
Q ss_pred CCcEEEEeccCCCCCCCCcHHHHHHHHHHHHHhCCCcEEEEeecCCCCCHHHHHHHHHcCCCeeec-chhchHHHH-hhh
Q 018731 147 GVDYIVLTSVDRDDIPDGGSGHFARTVKAMKKQKPDIMVECLTSDFRGDLRAVETLVHSGLDVFAH-NIETVKRLQ-RIV 224 (351)
Q Consensus 147 G~~~I~ltgg~~~~l~~~~~~~~~~li~~ik~~~p~i~i~~~~~~~~~~~e~l~~L~~aG~~~i~~-~ies~~~~~-~~~ 224 (351)
+++.++++.++ .+.-..++..+++.+|++.|-+... +++..+.|.++|++.+.. ..++..++. ..+
T Consensus 68 ~A~~viv~~~~--------~~~n~~i~~~ar~~~p~~~Iiara~----~~~~~~~L~~~Gad~Vi~~~~~~a~~la~~~L 135 (413)
T 3l9w_A 68 KAEVLINAIDD--------PQTNLQLTEMVKEHFPHLQIIARAR----DVDHYIRLRQAGVEKPERETFEGALKTGRLAL 135 (413)
T ss_dssp TCSEEEECCSS--------HHHHHHHHHHHHHHCTTCEEEEEES----SHHHHHHHHHTTCSSCEETTHHHHHHHHHHHH
T ss_pred ccCEEEECCCC--------hHHHHHHHHHHHHhCCCCeEEEEEC----CHHHHHHHHHCCCCEEECccHHHHHHHHHHHH
Confidence 35566664433 1445667788888888877755442 678999999999998742 334443331 111
Q ss_pred cCCCCCHHHHHHHHHHHH
Q 018731 225 RDPRAGYEQSLEVLKHAK 242 (351)
Q Consensus 225 r~~~~~~~~~l~~i~~~~ 242 (351)
..-+.+.+++.+.++.++
T Consensus 136 ~~lg~~~~~~~~~~~~~r 153 (413)
T 3l9w_A 136 ESLGLGPYEARERADVFR 153 (413)
T ss_dssp HHTTCCHHHHHHHHHHHH
T ss_pred HHcCCCHHHHHHHHHHHH
Confidence 112344444444444443
No 385
>1vli_A Spore coat polysaccharide biosynthesis protein SP; 2636322, JCSG, protein structure initiative, BS SPSE, PSI; 2.38A {Bacillus subtilis} SCOP: b.85.1.1 c.1.10.6
Probab=41.58 E-value=57 Score=30.50 Aligned_cols=61 Identities=10% Similarity=0.010 Sum_probs=45.9
Q ss_pred CCCHHHHHHHHHHHHhCCCCEEeeecccCC----CCCc--ccc-------------cCCCCHHHHHHHHHHHHhcCccee
Q 018731 259 GESDDDLKEAMADLRSIDVDILTLGQYLQP----TPLH--LTV-------------KEYVTPEKFDFWKAYGESIGFRYV 319 (351)
Q Consensus 259 gEt~e~~~~~l~~l~~lg~d~i~i~~~l~P----Tp~~--~~~-------------~~~v~~~e~~~~~~~~~~~G~~~~ 319 (351)
..+.+...++++.+++.|+|.+-+ +...| ||.. ... .-.++.+.+..+.+++++.|..++
T Consensus 40 ~Gsle~A~~li~~Ak~aGAdavKf-Q~~k~~tl~s~~~~~fq~~~~~~~~~ye~~~~~~l~~e~~~~L~~~~~~~Gi~~~ 118 (385)
T 1vli_A 40 DGKLDQAFALIDAAAEAGADAVKF-QMFQADRMYQKDPGLYKTAAGKDVSIFSLVQSMEMPAEWILPLLDYCREKQVIFL 118 (385)
T ss_dssp TTCHHHHHHHHHHHHHHTCSEEEE-CCBCGGGGTSCCC---------CCCHHHHGGGBSSCGGGHHHHHHHHHHTTCEEE
T ss_pred cccHHHHHHHHHHHHHhCCCEEee-eeeccCcccCcchhhhccCCCCCccHHHHHHhcCCCHHHHHHHHHHHHHcCCcEE
Confidence 788999999999999999999999 45556 3432 111 014677888899999999998766
Q ss_pred c
Q 018731 320 A 320 (351)
Q Consensus 320 ~ 320 (351)
.
T Consensus 119 s 119 (385)
T 1vli_A 119 S 119 (385)
T ss_dssp C
T ss_pred E
Confidence 3
No 386
>3rr1_A GALD, putative D-galactonate dehydratase; enolase, magnesium binding site, lyase; 1.95A {Ralstonia pickettii} PDB: 3rra_A
Probab=41.55 E-value=99 Score=28.90 Aligned_cols=78 Identities=13% Similarity=0.027 Sum_probs=48.6
Q ss_pred CchhHHHHHHHHHhCCCcEEEEeccCCCCCCC--CcHHHHHHHHHHHHHhC-CCcEEEEeecCCCCCH----HHHHHHHH
Q 018731 132 DPMEPENTAKAIASWGVDYIVLTSVDRDDIPD--GGSGHFARTVKAMKKQK-PDIMVECLTSDFRGDL----RAVETLVH 204 (351)
Q Consensus 132 ~~eei~~~~~~~~~~G~~~I~ltgg~~~~l~~--~~~~~~~~li~~ik~~~-p~i~i~~~~~~~~~~~----e~l~~L~~ 204 (351)
+++++.+.++.+.+.|++.+-+.|..+....+ ...+.-.+.++++++.. |++.+.+=.+.. .+. +.++.|.+
T Consensus 125 ~~e~~~~~a~~~~~~G~~~iKl~G~~~~~~~~~~~~~~~d~e~v~avR~avG~d~~L~vDaN~~-~~~~~A~~~~~~L~~ 203 (405)
T 3rr1_A 125 RPADVIAGMKALQAGGFDHFKLNGCEEMGIIDTSRAVDAAVARVAEIRSAFGNTVEFGLDFHGR-VSAPMAKVLIKELEP 203 (405)
T ss_dssp SHHHHHHHHHHHHHTTCCEEEEESCCSSSCBCSHHHHHHHHHHHHHHHHTTGGGSEEEEECCSC-BCHHHHHHHHHHHGG
T ss_pred CHHHHHHHHHHHHHcCCCEEEEecCCcccccccchhHHHHHHHHHHHHHHhCCCceEEEECCCC-CCHHHHHHHHHHHHh
Confidence 57888888888889999999885543211111 11345577888888875 566554322333 243 34566777
Q ss_pred cCCCee
Q 018731 205 SGLDVF 210 (351)
Q Consensus 205 aG~~~i 210 (351)
.|+..|
T Consensus 204 ~~i~~i 209 (405)
T 3rr1_A 204 YRPLFI 209 (405)
T ss_dssp GCCSCE
T ss_pred cCCCEE
Confidence 787766
No 387
>3tha_A Tryptophan synthase alpha chain; structural genomics, center for structural genomics of infec diseases, csgid, lyase; 2.37A {Campylobacter jejuni}
Probab=41.37 E-value=80 Score=27.60 Aligned_cols=112 Identities=16% Similarity=0.142 Sum_probs=0.0
Q ss_pred HHHHHHHHHhCCCcEEEEeccCCCCCCCCcHHHHHHHHHHHHHhCCCcEEEEeecCCCCCHHHHHHHHHcCCCeeecchh
Q 018731 136 PENTAKAIASWGVDYIVLTSVDRDDIPDGGSGHFARTVKAMKKQKPDIMVECLTSDFRGDLRAVETLVHSGLDVFAHNIE 215 (351)
Q Consensus 136 i~~~~~~~~~~G~~~I~ltgg~~~~l~~~~~~~~~~li~~ik~~~p~i~i~~~~~~~~~~~e~l~~L~~aG~~~i~~~ie 215 (351)
+++.++.+.+.|+..+.+ ++++ .+...++.+..+++ ++..-.+.+... +++.++.+.+.+-..++.-.-
T Consensus 105 ~e~F~~~~~~aGvdG~Ii-----pDLP---~eE~~~~~~~~~~~--Gl~~I~lvaP~t-~~eRi~~ia~~a~gFiY~Vs~ 173 (252)
T 3tha_A 105 LEKFVKKAKSLGICALIV-----PELS---FEESDDLIKECERY--NIALITLVSVTT-PKERVKKLVKHAKGFIYLLAS 173 (252)
T ss_dssp HHHHHHHHHHTTEEEEEC-----TTCC---GGGCHHHHHHHHHT--TCEECEEEETTS-CHHHHHHHHTTCCSCEEEECC
T ss_pred HHHHHHHHHHcCCCEEEe-----CCCC---HHHHHHHHHHHHHc--CCeEEEEeCCCC-cHHHHHHHHHhCCCeEEEEec
Q ss_pred chHHHHhhhcCCCCCHHHHHHHHHHHHHhCCCCeEEEeeeeeCCC-CHHHHHHH
Q 018731 216 TVKRLQRIVRDPRAGYEQSLEVLKHAKLSKKGLITKSSIMLGLGE-SDDDLKEA 268 (351)
Q Consensus 216 s~~~~~~~~r~~~~~~~~~l~~i~~~~~~~~Gi~v~~~~IvGlgE-t~e~~~~~ 268 (351)
..-. ..+ ....++..+.++++++ . +..-+++|+|= |.+++.+.
T Consensus 174 ~GvT---G~~--~~~~~~~~~~v~~vr~--~---~~~Pv~vGfGIst~e~a~~~ 217 (252)
T 3tha_A 174 IGIT---GTK--SVEEAILQDKVKEIRS--F---TNLPIFVGFGIQNNQDVKRM 217 (252)
T ss_dssp SCSS---SCS--HHHHHHHHHHHHHHHT--T---CCSCEEEESSCCSHHHHHHH
T ss_pred CCCC---Ccc--cCCCHHHHHHHHHHHH--h---cCCcEEEEcCcCCHHHHHHH
No 388
>3inp_A D-ribulose-phosphate 3-epimerase; IDP02542, isomerase, struc genomics, center for structural genomics of infectious DISE csgid; 2.05A {Francisella tularensis subsp}
Probab=41.37 E-value=1.7e+02 Score=25.24 Aligned_cols=82 Identities=13% Similarity=0.265 Sum_probs=45.8
Q ss_pred CCcEEEEeccCCCCCCC-----CcHHHHHHHHHHHHHhCCCcEEEEeecCCCCCHHHHHHHHHcCCCeeecchhchHHHH
Q 018731 147 GVDYIVLTSVDRDDIPD-----GGSGHFARTVKAMKKQKPDIMVECLTSDFRGDLRAVETLVHSGLDVFAHNIETVKRLQ 221 (351)
Q Consensus 147 G~~~I~ltgg~~~~l~~-----~~~~~~~~li~~ik~~~p~i~i~~~~~~~~~~~e~l~~L~~aG~~~i~~~ies~~~~~ 221 (351)
+++.|.+.+.+|. +.. ...+.+.++-+.+.++.+++.|++ .++. +.+.+..++++|.|.+-.| +.++
T Consensus 156 ~vD~VlvMsV~PG-fgGQ~fi~~~l~KI~~lr~~~~~~~~~~~I~V--DGGI-~~~ti~~~~~aGAD~~V~G----SaIf 227 (246)
T 3inp_A 156 NIDRVLIMSVNPG-FGGQKFIPAMLDKAKEISKWISSTDRDILLEI--DGGV-NPYNIAEIAVCGVNAFVAG----SAIF 227 (246)
T ss_dssp GCSEEEEECSCTT-C--CCCCTTHHHHHHHHHHHHHHHTSCCEEEE--ESSC-CTTTHHHHHTTTCCEEEES----HHHH
T ss_pred cCCEEEEeeecCC-CCCcccchHHHHHHHHHHHHHHhcCCCeeEEE--ECCc-CHHHHHHHHHcCCCEEEEe----hHHh
Confidence 3667777666643 211 112333333333333344566664 4443 7889999999999998766 2222
Q ss_pred hhhcCCCCCHHHHHHHHHHH
Q 018731 222 RIVRDPRAGYEQSLEVLKHA 241 (351)
Q Consensus 222 ~~~r~~~~~~~~~l~~i~~~ 241 (351)
+ ..++++.++.++..
T Consensus 228 ---~--a~dp~~~i~~l~~~ 242 (246)
T 3inp_A 228 ---N--SDSYKQTIDKMRDE 242 (246)
T ss_dssp ---T--SSCHHHHHHHHHHH
T ss_pred ---C--CCCHHHHHHHHHHH
Confidence 2 34666666655543
No 389
>2ojp_A DHDPS, dihydrodipicolinate synthase; dimer, lysine biosynthe lyase; HET: KGC GOL; 1.70A {Escherichia coli} PDB: 1yxc_A 1dhp_A 1yxd_A* 2ats_A* 3du0_A* 3c0j_A* 3ubs_A* 4eou_A* 3i7q_A* 3i7r_A* 3i7s_A* 2pur_A* 1s5v_A 1s5w_A 1s5t_A 3den_A* 2a6l_A 2a6n_A 3g0s_A
Probab=41.25 E-value=17 Score=32.57 Aligned_cols=79 Identities=14% Similarity=0.006 Sum_probs=48.1
Q ss_pred CCCchhHHHHHHHHHhCCCcEEEEec--cCCCCCCCCcHHHHHHHHHHHHHhCC-CcEEEEeecCCCCCHHHHHH---HH
Q 018731 130 PPDPMEPENTAKAIASWGVDYIVLTS--VDRDDIPDGGSGHFARTVKAMKKQKP-DIMVECLTSDFRGDLRAVET---LV 203 (351)
Q Consensus 130 ~~~~eei~~~~~~~~~~G~~~I~ltg--g~~~~l~~~~~~~~~~li~~ik~~~p-~i~i~~~~~~~~~~~e~l~~---L~ 203 (351)
..+.+...+.++.+.+.|++.+++.| |+...|. .+.-.++++.+.+... .+.|-+-+. ...+.+.++. ..
T Consensus 18 ~iD~~~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls---~~Er~~v~~~~~~~~~gr~pviaGvg-~~~t~~ai~la~~a~ 93 (292)
T 2ojp_A 18 NVCRASLKKLIDYHVASGTSAIVSVGTTGESATLN---HDEHADVVMMTLDLADGRIPVIAGTG-ANATAEAISLTQRFN 93 (292)
T ss_dssp CBCHHHHHHHHHHHHHHTCCEEEESSTTTTGGGSC---HHHHHHHHHHHHHHHTTSSCEEEECC-CSSHHHHHHHHHHTT
T ss_pred CcCHHHHHHHHHHHHHcCCCEEEECccccchhhCC---HHHHHHHHHHHHHHhCCCCcEEEecC-CccHHHHHHHHHHHH
Confidence 45677788999998899999999866 4444454 3555666666655422 244433222 2124555544 45
Q ss_pred HcCCCeeec
Q 018731 204 HSGLDVFAH 212 (351)
Q Consensus 204 ~aG~~~i~~ 212 (351)
++|.|.+.+
T Consensus 94 ~~Gadavlv 102 (292)
T 2ojp_A 94 DSGIVGCLT 102 (292)
T ss_dssp TSSCSEEEE
T ss_pred hcCCCEEEE
Confidence 568998754
No 390
>4exq_A UPD, URO-D, uroporphyrinogen decarboxylase; ssgcid, NIH, SBRI, heme biosynthesis, structural GENO niaid; 1.65A {Burkholderia thailandensis}
Probab=41.22 E-value=1.5e+02 Score=27.14 Aligned_cols=67 Identities=16% Similarity=0.190 Sum_probs=36.6
Q ss_pred HHhCCCcEEEEeccCCCCCCCCc-----HHHHHHHHHHHHHhCCC--cEEEEeecCCCCCHHHHHHHHHcCCCeeec
Q 018731 143 IASWGVDYIVLTSVDRDDIPDGG-----SGHFARTVKAMKKQKPD--IMVECLTSDFRGDLRAVETLVHSGLDVFAH 212 (351)
Q Consensus 143 ~~~~G~~~I~ltgg~~~~l~~~~-----~~~~~~li~~ik~~~p~--i~i~~~~~~~~~~~e~l~~L~~aG~~~i~~ 212 (351)
..+.|++-|.+.....+.++... .+++.++++.+++..|+ +.+-.... + ....++.+++.|+|.+++
T Consensus 206 qi~aGad~i~ifDs~~~~Lsp~~f~ef~~Py~k~i~~~l~~~~~g~~~pvi~f~~-g--~~~~l~~l~~~g~d~i~~ 279 (368)
T 4exq_A 206 QIEAGAQAVMIFDTWGGALADGAYQRFSLDYIRRVVAQLKREHDGARVPAIAFTK-G--GGLWLEDLAATGVDAVGL 279 (368)
T ss_dssp HHHHTCSEEEEEETTGGGSCTTHHHHHTHHHHHHHHHTSCCEETTEECCEEEEET-T--CGGGHHHHHTSSCSEEEC
T ss_pred HHHhCCCEEEEeCCccccCCHHHHHHHhHHHHHHHHHHHHHhcCCCCCcEEEEcC-C--cHHHHHHHHHhCCCEEee
Confidence 34679998866322222344322 23445566656553332 33322222 2 246788899999998865
No 391
>3tdn_A FLR symmetric alpha-beta TIM barrel; symmetric superfold, de novo protein; 1.40A {Synthetic construct} PDB: 3og3_A 3tdm_A
Probab=41.12 E-value=5.7 Score=34.58 Aligned_cols=73 Identities=19% Similarity=0.245 Sum_probs=0.0
Q ss_pred hHHHHHHHHHhCCCcEEEEeccCCCCCCCCcHHHHHHHHHHHHHhCCCcEEEEeecCCCCCHHHHHHHHHcCCCeeecc
Q 018731 135 EPENTAKAIASWGVDYIVLTSVDRDDIPDGGSGHFARTVKAMKKQKPDIMVECLTSDFRGDLRAVETLVHSGLDVFAHN 213 (351)
Q Consensus 135 ei~~~~~~~~~~G~~~I~ltgg~~~~l~~~~~~~~~~li~~ik~~~p~i~i~~~~~~~~~~~e~l~~L~~aG~~~i~~~ 213 (351)
+..+.++.+.+.|+..|++|+...+.... + .-.++++.+++.. ++.+ ...++..+.+.+..+.++|++.+.++
T Consensus 157 ~~~~~a~~~~~~G~~~i~~t~~~~~g~~~-g--~~~~~~~~i~~~~-~iPv--ia~GGI~~~~d~~~~~~~Gad~v~vg 229 (247)
T 3tdn_A 157 LLRDWVVEVEKRGAGEILLTSIDRDGTKS-G--YDTEMIRFVRPLT-TLPI--IASGGAGKMEHFLEAFLRGADKVSIN 229 (247)
T ss_dssp -------------------------------------------------------------------------------
T ss_pred CHHHHHHHHHhcCCCEEEEecccCCCCcC-C--CCHHHHHHHHHhC-CCCE--EEECCCCCHHHHHHHHHcCCcHhhcc
Confidence 34456666777899999988754321110 1 1235666666542 3333 23455556888999999999998765
No 392
>1x7f_A Outer surface protein; structural genomics, unknown function, MCSG, PSI, midwest center for struct genomics; 2.30A {Bacillus cereus atcc 14579} SCOP: b.62.1.2 c.1.8.12
Probab=40.98 E-value=1.3e+02 Score=28.15 Aligned_cols=144 Identities=10% Similarity=0.085 Sum_probs=77.9
Q ss_pred chhHHHHHHHHHhCCCcEEEEeccCCCCCCCCcHHHHHHHHHHHHHhCCCcEEEEeecCCC----CCHHHHHHHHHcCCC
Q 018731 133 PMEPENTAKAIASWGVDYIVLTSVDRDDIPDGGSGHFARTVKAMKKQKPDIMVECLTSDFR----GDLRAVETLVHSGLD 208 (351)
Q Consensus 133 ~eei~~~~~~~~~~G~~~I~ltgg~~~~l~~~~~~~~~~li~~ik~~~p~i~i~~~~~~~~----~~~e~l~~L~~aG~~ 208 (351)
.++..+.++.+.+.|+++|+-+=..+.+-...-.+.|.++++..++..-++.+.+ +|... .+.+.+..+++.|++
T Consensus 40 ~~~~~~Yi~~a~~~Gf~~IFTSL~~~e~~~~~~~~~~~~l~~~a~~~g~~vi~DV-sp~~~~~Lg~s~~dl~~f~~lGi~ 118 (385)
T 1x7f_A 40 KEKDMAYISAAARHGFSRIFTCLLSVNRPKEEIVAEFKEIINHAKDNNMEVILDV-APAVFDQLGISYSDLSFFAELGAD 118 (385)
T ss_dssp HHHHHHHHHHHHTTTEEEEEEEECCC--------HHHHHHHHHHHHTTCEEEEEE-CTTCC------CCCTHHHHHHTCS
T ss_pred HHHHHHHHHHHHHCCCCEEEccCCccCCChHHHHHHHHHHHHHHHHCCCEEEEEC-CHHHHHHcCCCHHHHHHHHHcCCC
Confidence 4556677788888999988543222211111113678889988888732333334 33321 133567888999999
Q ss_pred eeec--chhc--hHHHH-h-----h-hcCCCCCHHHHHHHHHHHHHhCCC---CeEEEeeeeeC--CCCHHHHHHHHHHH
Q 018731 209 VFAH--NIET--VKRLQ-R-----I-VRDPRAGYEQSLEVLKHAKLSKKG---LITKSSIMLGL--GESDDDLKEAMADL 272 (351)
Q Consensus 209 ~i~~--~ies--~~~~~-~-----~-~r~~~~~~~~~l~~i~~~~~~~~G---i~v~~~~IvGl--gEt~e~~~~~l~~l 272 (351)
.+-+ |+.. ...+. . + +. -. +-. +-++.+.+..+. +..+-+|-.=- |=+.+.+.+.=+++
T Consensus 119 gLRLD~Gf~~~eia~ls~n~~glkIeLN-AS-t~~---~~l~~l~~~~~n~~~l~acHNFYPr~~TGLs~~~f~~~n~~~ 193 (385)
T 1x7f_A 119 GIRLDVGFDGLTEAKMTNNPYGLKIELN-VS-NDI---AYLENILSHQANKSALIGCHNFYPQKFTGLPYDYFIRCSERF 193 (385)
T ss_dssp EEEESSCCSSHHHHHHTTCTTCCEEEEE-TT-SCS---SHHHHHTTSSCCGGGEEEECCCBCSTTCSBCHHHHHHHHHHH
T ss_pred EEEEcCCCCHHHHHHHhcCCCCCEEEEe-Cc-CCH---HHHHHHHHcCCChHHeEEeeccCCCCCCCCCHHHHHHHHHHH
Confidence 9876 3322 11221 1 0 00 01 212 233344442233 22344543211 67889999999999
Q ss_pred HhCCCCEEee
Q 018731 273 RSIDVDILTL 282 (351)
Q Consensus 273 ~~lg~d~i~i 282 (351)
++.|+....|
T Consensus 194 k~~Gi~t~AF 203 (385)
T 1x7f_A 194 KKHGIRSAAF 203 (385)
T ss_dssp HHTTCCCEEE
T ss_pred HHCCCcEEEE
Confidence 9999886554
No 393
>1s2w_A Phosphoenolpyruvate phosphomutase; phosphonopyruvate, phosphonate biosynthesis pathway, isomera; 1.69A {Mytilus edulis} SCOP: c.1.12.7 PDB: 1m1b_A 1s2t_A 1s2v_A 1pym_A 1s2u_A
Probab=40.93 E-value=1.6e+02 Score=26.35 Aligned_cols=74 Identities=19% Similarity=0.246 Sum_probs=47.6
Q ss_pred chhHHHHHHHHHhCCCcEEEEeccCCCCCCCCcHHHHHHHHHHHHHhCCCcEEEEeecCCCCCHHHHHHHHHcCCCeeec
Q 018731 133 PMEPENTAKAIASWGVDYIVLTSVDRDDIPDGGSGHFARTVKAMKKQKPDIMVECLTSDFRGDLRAVETLVHSGLDVFAH 212 (351)
Q Consensus 133 ~eei~~~~~~~~~~G~~~I~ltgg~~~~l~~~~~~~~~~li~~ik~~~p~i~i~~~~~~~~~~~e~l~~L~~aG~~~i~~ 212 (351)
.++.++-++++.+.|..-|++-++.++ .+.+.++.+.+....| +-++...+-.. ..+.|.+.|+.++.+
T Consensus 169 ~~~ai~Ra~ay~eAGAd~i~~e~~~~~------~~~~~~i~~~~~~~~P---~i~~~~~~~~~--~~~eL~~lGv~~v~~ 237 (295)
T 1s2w_A 169 LDEALKRAEAYRNAGADAILMHSKKAD------PSDIEAFMKAWNNQGP---VVIVPTKYYKT--PTDHFRDMGVSMVIW 237 (295)
T ss_dssp HHHHHHHHHHHHHTTCSEEEECCCSSS------SHHHHHHHHHHTTCSC---EEECCSTTTTS--CHHHHHHHTCCEEEE
T ss_pred HHHHHHHHHHHHHcCCCEEEEcCCCCC------HHHHHHHHHHcCCCCC---EEEeCCCCCCC--CHHHHHHcCCcEEEE
Confidence 467788888899999999999543221 2567777777753233 22221112111 278899999999988
Q ss_pred chhch
Q 018731 213 NIETV 217 (351)
Q Consensus 213 ~ies~ 217 (351)
+.-.+
T Consensus 238 ~~~~~ 242 (295)
T 1s2w_A 238 ANHNL 242 (295)
T ss_dssp CSHHH
T ss_pred ChHHH
Confidence 75443
No 394
>3q58_A N-acetylmannosamine-6-phosphate 2-epimerase; TIM beta/alpha barrel, ribulose-phosphate binding barrel, carbohydrate metabolic process; HET: BTB; 1.80A {Salmonella enterica subsp}
Probab=40.79 E-value=1.1e+02 Score=26.12 Aligned_cols=120 Identities=9% Similarity=0.081 Sum_probs=68.8
Q ss_pred HHHHHHhCCCcEEEEeccCCCCCCCCcHHHHHHHHHHHHHhCCCcEEEEeecCCCCCHHHHHHHHHcCCCeeecchhchH
Q 018731 139 TAKAIASWGVDYIVLTSVDRDDIPDGGSGHFARTVKAMKKQKPDIMVECLTSDFRGDLRAVETLVHSGLDVFAHNIETVK 218 (351)
Q Consensus 139 ~~~~~~~~G~~~I~ltgg~~~~l~~~~~~~~~~li~~ik~~~p~i~i~~~~~~~~~~~e~l~~L~~aG~~~i~~~ies~~ 218 (351)
.++++.+.|++.|.+..... +. .+.+.++++.+++. ++.+-+.. .+.+.++...++|+|.|..++....
T Consensus 93 ~i~~~~~aGad~I~l~~~~~--~~---p~~l~~~i~~~~~~--g~~v~~~v----~t~eea~~a~~~Gad~Ig~~~~g~t 161 (229)
T 3q58_A 93 DVDALAQAGADIIAFDASFR--SR---PVDIDSLLTRIRLH--GLLAMADC----STVNEGISCHQKGIEFIGTTLSGYT 161 (229)
T ss_dssp HHHHHHHHTCSEEEEECCSS--CC---SSCHHHHHHHHHHT--TCEEEEEC----SSHHHHHHHHHTTCSEEECTTTTSS
T ss_pred HHHHHHHcCCCEEEECcccc--CC---hHHHHHHHHHHHHC--CCEEEEec----CCHHHHHHHHhCCCCEEEecCccCC
Confidence 45556778999887754431 11 13567778888875 54433211 2778889999999999954332211
Q ss_pred HHHhhhcCCCCCHHHHHHHHHHHHHhCCCCeEEEeeeeeCC-CCHHHHHHHHHHHHhCCCCEEeeeccc
Q 018731 219 RLQRIVRDPRAGYEQSLEVLKHAKLSKKGLITKSSIMLGLG-ESDDDLKEAMADLRSIDVDILTLGQYL 286 (351)
Q Consensus 219 ~~~~~~r~~~~~~~~~l~~i~~~~~~~~Gi~v~~~~IvGlg-Et~e~~~~~l~~l~~lg~d~i~i~~~l 286 (351)
...+ . ...++ +.++.+++ .++. +|..-| .|.+++.+. .++|++-+.++..+
T Consensus 162 ~~~~-~--~~~~~----~li~~l~~--~~ip----vIA~GGI~t~~d~~~~----~~~GadgV~VGsai 213 (229)
T 3q58_A 162 GPIT-P--VEPDL----AMVTQLSH--AGCR----VIAEGRYNTPALAANA----IEHGAWAVTVGSAI 213 (229)
T ss_dssp SSCC-C--SSCCH----HHHHHHHT--TTCC----EEEESSCCSHHHHHHH----HHTTCSEEEECHHH
T ss_pred CCCc-C--CCCCH----HHHHHHHH--cCCC----EEEECCCCCHHHHHHH----HHcCCCEEEEchHh
Confidence 1000 0 12243 55566665 4444 222223 367777655 45799988886443
No 395
>2r14_A Morphinone reductase; H-tunnelling, flavoprotein, NADH, hydride transfer, oxidoreductase; HET: FMN TXD; 1.40A {Pseudomonas putida} PDB: 3gx9_A* 1gwj_A*
Probab=40.70 E-value=88 Score=29.00 Aligned_cols=25 Identities=12% Similarity=0.078 Sum_probs=21.9
Q ss_pred CCCHHHHHHHHHHHHhCCCCEEeee
Q 018731 259 GESDDDLKEAMADLRSIDVDILTLG 283 (351)
Q Consensus 259 gEt~e~~~~~l~~l~~lg~d~i~i~ 283 (351)
|.+.++..+.++.+.+.|+|.+.+.
T Consensus 251 ~~~~~~~~~la~~le~~Gvd~i~v~ 275 (377)
T 2r14_A 251 DEPEAMAFYLAGELDRRGLAYLHFN 275 (377)
T ss_dssp SCHHHHHHHHHHHHHHTTCSEEEEE
T ss_pred CCCHHHHHHHHHHHHHcCCCEEEEe
Confidence 4677888999999999999999985
No 396
>3s1x_A Probable transaldolase; alpha-beta barrel, conformational selection, domain swapping transferase; HET: I22; 1.65A {Thermoplasma acidophilum} PDB: 3s1u_A* 3s1v_A* 3s0c_A* 3s1w_A*
Probab=40.64 E-value=65 Score=27.68 Aligned_cols=75 Identities=21% Similarity=0.190 Sum_probs=47.5
Q ss_pred HHhCCCcEEEEeccCCCCCCCCcHHHHHHHHHHHHHhCCCcEEEEeecCCCCCHHHHHHHHHcCCCeeecchhchHHH
Q 018731 143 IASWGVDYIVLTSVDRDDIPDGGSGHFARTVKAMKKQKPDIMVECLTSDFRGDLRAVETLVHSGLDVFAHNIETVKRL 220 (351)
Q Consensus 143 ~~~~G~~~I~ltgg~~~~l~~~~~~~~~~li~~ik~~~p~i~i~~~~~~~~~~~e~l~~L~~aG~~~i~~~ies~~~~ 220 (351)
..+.|+.+|.---|--++..+.+.+.+.++.+.++.+..+..| +...+. +...+.....+|+|.+.+..+-++++
T Consensus 121 Aa~AGa~yISPfvgRi~d~g~dG~~~v~~i~~~~~~~~~~T~I--laAS~R-n~~~v~~aa~~G~d~~Tip~~vl~~l 195 (223)
T 3s1x_A 121 AAKAGVTYVSPFVGRLDDIGEDGMQIIDMIRTIFNNYIIKTQI--LVASIR-NPIHVLRSAVIGADVVTVPFNVLKSL 195 (223)
T ss_dssp HHHTTCSEEEEBSHHHHHTTSCTHHHHHHHHHHHHHTTCCSEE--EEBSCC-SHHHHHHHHHHTCSEEEECHHHHHHT
T ss_pred HHHcCCeEEEeecchHhhcCCCHHHHHHHHHHHHHHcCCCCEE--EEEeCC-CHHHHHHHHHcCCCEEEeCHHHHHHH
Confidence 4467888774321211223333567778888888876444443 334454 77888888899999999876666554
No 397
>3h5d_A DHDPS, dihydrodipicolinate synthase; lysine biosynthesis, amino-ACI biosynthesis, schiff base, cytoplasm, diaminopimelate biosy lyase; HET: MES; 1.99A {Streptococcus pneumoniae}
Probab=40.58 E-value=48 Score=29.91 Aligned_cols=79 Identities=9% Similarity=-0.029 Sum_probs=50.3
Q ss_pred CCCchhHHHHHHHHHhCCCcEEEEec--cCCCCCCCCcHHHHHHHHHHHHHhCC-CcEEEEeecCCCCCH---HHHHHHH
Q 018731 130 PPDPMEPENTAKAIASWGVDYIVLTS--VDRDDIPDGGSGHFARTVKAMKKQKP-DIMVECLTSDFRGDL---RAVETLV 203 (351)
Q Consensus 130 ~~~~eei~~~~~~~~~~G~~~I~ltg--g~~~~l~~~~~~~~~~li~~ik~~~p-~i~i~~~~~~~~~~~---e~l~~L~ 203 (351)
..+.+...+.++.+.+.|++.+++.| |+...|. .+.-.++++.+.+... .+.|-+-+. ...+. +..+...
T Consensus 24 ~iD~~~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls---~~Er~~v~~~~~~~~~grvpViaGvg-~~~t~~ai~la~~A~ 99 (311)
T 3h5d_A 24 SINFDAIPALIEHLLAHHTDGILLAGTTAESPTLT---HDEELELFAAVQKVVNGRVPLIAGVG-TNDTRDSIEFVKEVA 99 (311)
T ss_dssp SBCTTHHHHHHHHHHHTTCCCEEESSTTTTGGGSC---HHHHHHHHHHHHHHSCSSSCEEEECC-CSSHHHHHHHHHHHH
T ss_pred CcCHHHHHHHHHHHHHcCCCEEEECccccChhhCC---HHHHHHHHHHHHHHhCCCCcEEEeCC-CcCHHHHHHHHHHHH
Confidence 35677888999999999999998866 4444444 4666778877776543 344433222 11233 4555667
Q ss_pred HcCC-Ceeec
Q 018731 204 HSGL-DVFAH 212 (351)
Q Consensus 204 ~aG~-~~i~~ 212 (351)
++|. |.+.+
T Consensus 100 ~~Ga~davlv 109 (311)
T 3h5d_A 100 EFGGFAAGLA 109 (311)
T ss_dssp HSCCCSEEEE
T ss_pred hcCCCcEEEE
Confidence 7786 88754
No 398
>3q58_A N-acetylmannosamine-6-phosphate 2-epimerase; TIM beta/alpha barrel, ribulose-phosphate binding barrel, carbohydrate metabolic process; HET: BTB; 1.80A {Salmonella enterica subsp}
Probab=40.56 E-value=1.1e+02 Score=26.17 Aligned_cols=69 Identities=12% Similarity=0.050 Sum_probs=41.9
Q ss_pred HHHHHHHhCCCcEEEEe--ccCCCCCCCCcHHHHHHHHHHHHHhCCCcEEEEeecCCCCCHHHHHHHHHcCCCeeecc
Q 018731 138 NTAKAIASWGVDYIVLT--SVDRDDIPDGGSGHFARTVKAMKKQKPDIMVECLTSDFRGDLRAVETLVHSGLDVFAHN 213 (351)
Q Consensus 138 ~~~~~~~~~G~~~I~lt--gg~~~~l~~~~~~~~~~li~~ik~~~p~i~i~~~~~~~~~~~e~l~~L~~aG~~~i~~~ 213 (351)
++++.+.+.|++.|.++ |-+...... + .. .++++.+++. ++.+- ..++..+.+.+..+.++|++.+.+|
T Consensus 140 eea~~a~~~Gad~Ig~~~~g~t~~~~~~-~-~~-~~li~~l~~~--~ipvI--A~GGI~t~~d~~~~~~~GadgV~VG 210 (229)
T 3q58_A 140 NEGISCHQKGIEFIGTTLSGYTGPITPV-E-PD-LAMVTQLSHA--GCRVI--AEGRYNTPALAANAIEHGAWAVTVG 210 (229)
T ss_dssp HHHHHHHHTTCSEEECTTTTSSSSCCCS-S-CC-HHHHHHHHTT--TCCEE--EESSCCSHHHHHHHHHTTCSEEEEC
T ss_pred HHHHHHHhCCCCEEEecCccCCCCCcCC-C-CC-HHHHHHHHHc--CCCEE--EECCCCCHHHHHHHHHcCCCEEEEc
Confidence 44556678899988542 211100000 0 11 2566666654 45443 3456568999999999999999887
No 399
>3gka_A N-ethylmaleimide reductase; decode biostructures, ssgcid, niaid, targetdb bupsa00093A, structural genomics; HET: FMN; 2.30A {Burkholderia pseudomallei} SCOP: c.1.4.0
Probab=40.32 E-value=78 Score=29.22 Aligned_cols=87 Identities=15% Similarity=0.119 Sum_probs=46.5
Q ss_pred HHHHHHHHcCCCeeecchhc---hHHHH-hhhc---C-CCCCHHH----HHHHHHHHHHhC-C---CCeEEEe-eeeeC-
Q 018731 197 RAVETLVHSGLDVFAHNIET---VKRLQ-RIVR---D-PRAGYEQ----SLEVLKHAKLSK-K---GLITKSS-IMLGL- 258 (351)
Q Consensus 197 e~l~~L~~aG~~~i~~~ies---~~~~~-~~~r---~-~~~~~~~----~l~~i~~~~~~~-~---Gi~v~~~-~IvGl- 258 (351)
+.+++.+++|+|.|-++.-- ++++. ...+ | -+.+++. .++.++.+++.. . +++++.. ..-|+
T Consensus 165 ~AA~~A~~aGfDgVEih~a~GYLl~QFLsp~~N~RtD~yGGslenR~rf~~evv~aVr~~vg~~~v~vRls~~~~~~g~~ 244 (361)
T 3gka_A 165 RGAENARAAGFDGVEVHGANGYLLDQFLQDSANRRTDAYGGSIENRARLLLEVVDAAIDVWSAARVGVHLAPRGDAHTMG 244 (361)
T ss_dssp HHHHHHHHTTCSEEEEECCTTSHHHHHHSTTTCCCCSTTSSSHHHHSHHHHHHHHHHHHHHCGGGEEEEECTTCCSSSCC
T ss_pred HHHHHHHHcCCCEEEECCcCccHHHhccCcccccccCCCCCChhhcHHHHHHHHHHHHHHcCCCeEEEecccccccCCCC
Confidence 45677788999999764321 22321 1111 0 1234442 233444444321 1 2222221 11133
Q ss_pred -CCCHHHHHHHHHHHHhCCCCEEeee
Q 018731 259 -GESDDDLKEAMADLRSIDVDILTLG 283 (351)
Q Consensus 259 -gEt~e~~~~~l~~l~~lg~d~i~i~ 283 (351)
+++.++..+.++.+.+.|+|.+.+.
T Consensus 245 ~~~~~~~~~~la~~l~~~Gvd~i~v~ 270 (361)
T 3gka_A 245 DSDPAATFGHVARELGRRRIAFLFAR 270 (361)
T ss_dssp CSCHHHHHHHHHHHHHHTTCSEEEEE
T ss_pred CCCcHHHHHHHHHHHHHcCCCEEEEC
Confidence 2346788999999999999999885
No 400
>2gou_A Oxidoreductase, FMN-binding; OLD yeallow enzyme, flavoenzyme; HET: BOG FMN PE4; 1.40A {Shewanella oneidensis} PDB: 2gq8_A* 2gq9_A* 2gqa_A*
Probab=40.30 E-value=41 Score=31.12 Aligned_cols=25 Identities=16% Similarity=0.061 Sum_probs=21.9
Q ss_pred CCCHHHHHHHHHHHHhCCCCEEeee
Q 018731 259 GESDDDLKEAMADLRSIDVDILTLG 283 (351)
Q Consensus 259 gEt~e~~~~~l~~l~~lg~d~i~i~ 283 (351)
+.+.++..+.++.+.+.|+|.+.+.
T Consensus 246 ~~~~~~~~~~a~~l~~~G~d~i~v~ 270 (365)
T 2gou_A 246 ADPILTYTAAAALLNKHRIVYLHIA 270 (365)
T ss_dssp SSHHHHHHHHHHHHHHTTCSEEEEE
T ss_pred CCCHHHHHHHHHHHHHcCCCEEEEe
Confidence 4577889999999999999999985
No 401
>3rcy_A Mandelate racemase/muconate lactonizing enzyme-LI protein; structural genomics, protein structure initiative; HET: RIB; 1.99A {Roseovarius SP} PDB: 3t4w_A
Probab=40.27 E-value=1.1e+02 Score=28.80 Aligned_cols=80 Identities=6% Similarity=-0.056 Sum_probs=49.6
Q ss_pred CCchhHHHHHHHHHhCCCcEEEEeccCCCC-----CC-CCcHHHHHHHHHHHHHhC-CCcEEEEeecCCCCCH----HHH
Q 018731 131 PDPMEPENTAKAIASWGVDYIVLTSVDRDD-----IP-DGGSGHFARTVKAMKKQK-PDIMVECLTSDFRGDL----RAV 199 (351)
Q Consensus 131 ~~~eei~~~~~~~~~~G~~~I~ltgg~~~~-----l~-~~~~~~~~~li~~ik~~~-p~i~i~~~~~~~~~~~----e~l 199 (351)
.+++++.+.++.+.+.|++.+-+-.|.+.. .+ ..+.+.-.+.++++++.. +++.+.+=.+.. .+. +.+
T Consensus 145 ~~~e~~~~~a~~~~~~Gf~~iKlk~g~~~~~~~G~~~~~~~~~~d~e~v~avR~avG~d~~L~vDan~~-~t~~~A~~~~ 223 (433)
T 3rcy_A 145 TSADMAAESAADCVARGYTAVKFDPAGPYTLRGGHMPAMTDISLSVEFCRKIRAAVGDKADLLFGTHGQ-FTTAGAIRLG 223 (433)
T ss_dssp TCHHHHHHHHHHHHHTTCSEEEECCSCCCBTTCCBCCCHHHHHHHHHHHHHHHHHHTTSSEEEECCCSC-BCHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEcCCCCcccccCCCcchhhHHHHHHHHHHHHHHhCCCCeEEEeCCCC-CCHHHHHHHH
Confidence 357888888988889999999884332210 00 001345677888888764 666655422333 243 345
Q ss_pred HHHHHcCCCeee
Q 018731 200 ETLVHSGLDVFA 211 (351)
Q Consensus 200 ~~L~~aG~~~i~ 211 (351)
+.|.+.|+..|-
T Consensus 224 ~~Le~~~i~~iE 235 (433)
T 3rcy_A 224 QAIEPYSPLWYE 235 (433)
T ss_dssp HHHGGGCCSEEE
T ss_pred HHhhhcCCCEEE
Confidence 667777888773
No 402
>3ijd_A Uncharacterized protein; structural genomics, unknown function, PSI-2, protein structure initiative; HET: C2F; 2.00A {Clostridium thermocellum atcc 27405}
Probab=40.17 E-value=1.2e+02 Score=27.48 Aligned_cols=115 Identities=12% Similarity=0.114 Sum_probs=63.2
Q ss_pred CCchhHHHHHHHHHhCCCcEEEEeccCCCCC-CCCcHHHHHHHHHHHHHhCCCcEEEEe-ecCC----CCCHHHHHHHHH
Q 018731 131 PDPMEPENTAKAIASWGVDYIVLTSVDRDDI-PDGGSGHFARTVKAMKKQKPDIMVECL-TSDF----RGDLRAVETLVH 204 (351)
Q Consensus 131 ~~~eei~~~~~~~~~~G~~~I~ltgg~~~~l-~~~~~~~~~~li~~ik~~~p~i~i~~~-~~~~----~~~~e~l~~L~~ 204 (351)
.+.+++.+.++.+...|++.| |.|.-+... ...++.+..++ +++..+++.|.+. .|.. ..+.+.++.=.+
T Consensus 101 ~t~~ei~~~L~~~~~~GI~ni-LRGDpp~~~~~~~~~~~A~~l---~~~~~~~F~IGvA~yPe~H~~~~~d~~~Lk~Kvd 176 (315)
T 3ijd_A 101 YTPDEFRRLTRPVSGQDAFSV-FVGAASRNQSVLLKLSDAYKI---RQDVNPDLLLGGVAIPERHMKNTDEHLRIIDKIN 176 (315)
T ss_dssp SCHHHHHHHHSCCTTCCCEEE-EECCCC----CCSCHHHHHHH---HHHHCTTSEEEEEECGGGHHHHSCHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHcCCcEE-ecCCCCCCCCCCcCHHHHHHH---HHhcCCCEEEEEEECCCCCCCHHHHHHHHHHHHH
Confidence 457888888888888999886 454322111 12235555554 4444456665532 2333 123455666667
Q ss_pred cCCCeeecchhchHHHHhhhcCCCCCHHHHHHHH----HHHHHhCCCCeEEEeeeeeC--CCCHHHH
Q 018731 205 SGLDVFAHNIETVKRLQRIVRDPRAGYEQSLEVL----KHAKLSKKGLITKSSIMLGL--GESDDDL 265 (351)
Q Consensus 205 aG~~~i~~~ies~~~~~~~~r~~~~~~~~~l~~i----~~~~~~~~Gi~v~~~~IvGl--gEt~e~~ 265 (351)
||.+.+. .+ .-++.+.+.+.+ +.+++ .|+. ..-++.|+ -.+...+
T Consensus 177 AGAdf~I------TQ-------~ffD~e~~~~f~~~~~~~~r~--~Gi~-~vPIipGImPi~s~k~~ 227 (315)
T 3ijd_A 177 KGCKYFI------TQ-------AVYNVEAAKDFLSDYYYYSKN--NNLK-MVPIIFTLTPCGSTKTL 227 (315)
T ss_dssp TTCCEEE------ES-------CCCCHHHHHHHHHHHHHHHHH--TTBC-CCCEEEEECCCCSHHHH
T ss_pred CCCCEEE------cc-------ccCCHHHHHHHHHHHHHHHHH--CCCC-CCcEEEEeeecCCHHHH
Confidence 8998761 11 234555555555 46677 7872 24556665 3455553
No 403
>3igs_A N-acetylmannosamine-6-phosphate 2-epimerase 2; energy metabolism, sugars, csgid, carbohydrate metabolism, isomerase; HET: MSE 16G; 1.50A {Salmonella enterica subsp} SCOP: c.1.2.0
Probab=40.07 E-value=1.2e+02 Score=25.93 Aligned_cols=68 Identities=16% Similarity=0.073 Sum_probs=41.5
Q ss_pred HHHHHHHhCCCcEEEEe--ccCCCC-CCCCcHHHHHHHHHHHHHhCCCcEEEEeecCCCCCHHHHHHHHHcCCCeeecc
Q 018731 138 NTAKAIASWGVDYIVLT--SVDRDD-IPDGGSGHFARTVKAMKKQKPDIMVECLTSDFRGDLRAVETLVHSGLDVFAHN 213 (351)
Q Consensus 138 ~~~~~~~~~G~~~I~lt--gg~~~~-l~~~~~~~~~~li~~ik~~~p~i~i~~~~~~~~~~~e~l~~L~~aG~~~i~~~ 213 (351)
++++.+.+.|++.|.++ |-+... ....+ .++++.+++. ++.+-+ .++..+.+.+..+.++|++.+.++
T Consensus 140 eea~~a~~~Gad~Ig~~~~g~t~~~~~~~~~----~~~i~~l~~~--~ipvIA--~GGI~t~~d~~~~~~~GadgV~VG 210 (232)
T 3igs_A 140 DDGLACQRLGADIIGTTMSGYTTPDTPEEPD----LPLVKALHDA--GCRVIA--EGRYNSPALAAEAIRYGAWAVTVG 210 (232)
T ss_dssp HHHHHHHHTTCSEEECTTTTSSSSSCCSSCC----HHHHHHHHHT--TCCEEE--ESCCCSHHHHHHHHHTTCSEEEEC
T ss_pred HHHHHHHhCCCCEEEEcCccCCCCCCCCCCC----HHHHHHHHhc--CCcEEE--ECCCCCHHHHHHHHHcCCCEEEEe
Confidence 44556678899988542 211100 11111 3556666654 454432 455558999999999999999887
No 404
>1vyr_A Pentaerythritol tetranitrate reductase; oxidoreductase, flavoenzyme, explosive degradation, steroid binding; HET: FMN TNF; 0.9A {Enterobacter cloacae} SCOP: c.1.4.1 PDB: 1gvq_A* 1gvr_A* 1gvs_A* 1h50_A* 1h51_A* 1h60_A* 1h61_A* 1h62_A* 1h63_A* 1gvo_A* 2aba_A* 3f03_K* 3kft_A* 3p7y_A* 3p80_A* 3p81_A* 3p62_A* 3p8i_A* 2abb_A* 3p67_A* ...
Probab=40.02 E-value=1.2e+02 Score=27.91 Aligned_cols=73 Identities=12% Similarity=0.158 Sum_probs=47.0
Q ss_pred chhHHHHHHHHHhCCCcEEEEeccCCCCCCCCcHHHHHHHHHHHHHhCCCcEEEEeecCCCCCHHHHHHHHHcC-CCeee
Q 018731 133 PMEPENTAKAIASWGVDYIVLTSVDRDDIPDGGSGHFARTVKAMKKQKPDIMVECLTSDFRGDLRAVETLVHSG-LDVFA 211 (351)
Q Consensus 133 ~eei~~~~~~~~~~G~~~I~ltgg~~~~l~~~~~~~~~~li~~ik~~~p~i~i~~~~~~~~~~~e~l~~L~~aG-~~~i~ 211 (351)
.++..+.++.+.+.|+..|.+.++.....+... .+.++.+++.. ++.|-+ .+.. +.+.++.+.+.| +|.|.
T Consensus 250 ~~~~~~~a~~l~~~G~d~i~v~~~~~~~~~~~~----~~~~~~v~~~~-~iPvi~--~Ggi-t~~~a~~~l~~g~aD~V~ 321 (364)
T 1vyr_A 250 EADALYLIEELAKRGIAYLHMSETDLAGGKPYS----EAFRQKVRERF-HGVIIG--AGAY-TAEKAEDLIGKGLIDAVA 321 (364)
T ss_dssp HHHHHHHHHHHHHTTCSEEEEECCBTTBCCCCC----HHHHHHHHHHC-CSEEEE--ESSC-CHHHHHHHHHTTSCSEEE
T ss_pred HHHHHHHHHHHHHhCCCEEEEecCcccCCCccc----HHHHHHHHHHC-CCCEEE--ECCc-CHHHHHHHHHCCCccEEE
Confidence 345677788888899999988764311111111 24566777764 445433 4444 788888888887 99988
Q ss_pred cc
Q 018731 212 HN 213 (351)
Q Consensus 212 ~~ 213 (351)
++
T Consensus 322 ~g 323 (364)
T 1vyr_A 322 FG 323 (364)
T ss_dssp ES
T ss_pred EC
Confidence 76
No 405
>3gnh_A L-lysine, L-arginine carboxypeptidase CC2672; N-methyl phosphonate derivative of L- arginine, hydrolase; HET: KCX M3R; 1.70A {Caulobacter crescentus CB15} PDB: 3mtw_A*
Probab=39.98 E-value=2.1e+02 Score=25.69 Aligned_cols=77 Identities=16% Similarity=0.228 Sum_probs=48.7
Q ss_pred CchhHHHHHHHHHhCCCcEEEE--eccC-----CCCCCCCcHHHHHHHHHHHHHhCCCcEEEEeecCCCCCHHHHHHHHH
Q 018731 132 DPMEPENTAKAIASWGVDYIVL--TSVD-----RDDIPDGGSGHFARTVKAMKKQKPDIMVECLTSDFRGDLRAVETLVH 204 (351)
Q Consensus 132 ~~eei~~~~~~~~~~G~~~I~l--tgg~-----~~~l~~~~~~~~~~li~~ik~~~p~i~i~~~~~~~~~~~e~l~~L~~ 204 (351)
.+++..+.+++..+.|...|-+ +|+. +........+.+.++++..++. ++.+.+-.. ..+.++...+
T Consensus 165 ~~~~~~~~~~~~~~~g~~~ik~~~~G~~~~~~~~~~~~~~~~e~l~~~~~~A~~~--g~~v~~H~~----~~~~i~~~~~ 238 (403)
T 3gnh_A 165 SPDEARKAVRTLKKYGAQVIKICATGGVFSRGNEPGQQQLTYEEMKAVVDEAHMA--GIKVAAHAH----GASGIREAVR 238 (403)
T ss_dssp SHHHHHHHHHHHHHTTCSEEEEECBCCSSSSSCCTTCBCSCHHHHHHHHHHHHHT--TCEEEEEEC----SHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHcCCCEEEEeecCCcCCCCCCCccccCCHHHHHHHHHHHHHC--CCEEEEEeC----CHHHHHHHHH
Confidence 4577888888888889887644 3331 1111112357888899888887 555433111 3456777888
Q ss_pred cCCCeeecch
Q 018731 205 SGLDVFAHNI 214 (351)
Q Consensus 205 aG~~~i~~~i 214 (351)
+|++.+.|..
T Consensus 239 ~g~~~i~H~~ 248 (403)
T 3gnh_A 239 AGVDTIEHAS 248 (403)
T ss_dssp TTCSEEEECT
T ss_pred hCCCEEecCC
Confidence 8988887754
No 406
>3b8i_A PA4872 oxaloacetate decarboxylase; alpha/beta barrel, helix swapping, lyase; 1.90A {Pseudomonas aeruginosa}
Probab=39.46 E-value=2e+02 Score=25.48 Aligned_cols=112 Identities=13% Similarity=0.042 Sum_probs=75.1
Q ss_pred CHHHHHHHHHcCCCeeecchhchH-HHHhhhcCC-CCCHHHHHHHHHHHHHhCCCCeEEEeeeeeCCCCHHHHHHHHHHH
Q 018731 195 DLRAVETLVHSGLDVFAHNIETVK-RLQRIVRDP-RAGYEQSLEVLKHAKLSKKGLITKSSIMLGLGESDDDLKEAMADL 272 (351)
Q Consensus 195 ~~e~l~~L~~aG~~~i~~~ies~~-~~~~~~r~~-~~~~~~~l~~i~~~~~~~~Gi~v~~~~IvGlgEt~e~~~~~l~~l 272 (351)
|.-....+.++|++.+.++=-++. ... ...+. ..++++.+..++.+.+. ..+.+.+|+-.|+| +.+++.+++..+
T Consensus 30 D~~sA~i~e~aGf~ai~vs~s~~a~~~l-G~pD~~~vt~~em~~~~~~I~r~-~~~PviaD~d~Gyg-~~~~~~~~v~~l 106 (287)
T 3b8i_A 30 DPMSARIAADLGFECGILGGSVASLQVL-AAPDFALITLSEFVEQATRIGRV-ARLPVIADADHGYG-NALNVMRTVVEL 106 (287)
T ss_dssp SHHHHHHHHHTTCSCEEECHHHHHHHHH-SCCSSSCSCHHHHHHHHHHHHTT-CSSCEEEECTTCSS-SHHHHHHHHHHH
T ss_pred CHHHHHHHHHcCCCEEEeCcHHHHHHhc-CCCCCCCCCHHHHHHHHHHHHhc-CCCCEEEECCCCCC-CHHHHHHHHHHH
Confidence 777888899999999987622122 111 11111 35899999999988752 45678999999988 889999999999
Q ss_pred HhCCCCEEeeecccCC-CCCcccccCCCCHHHHHH-HHHH
Q 018731 273 RSIDVDILTLGQYLQP-TPLHLTVKEYVTPEKFDF-WKAY 310 (351)
Q Consensus 273 ~~lg~d~i~i~~~l~P-Tp~~~~~~~~v~~~e~~~-~~~~ 310 (351)
.+.|+.-+.+=--..| .-.+.... .++.+++.. ++..
T Consensus 107 ~~aGa~gv~iED~~~pKrcgh~~gk-l~~~~e~~~~I~aa 145 (287)
T 3b8i_A 107 ERAGIAALTIEDTLLPAQFGRKSTD-LICVEEGVGKIRAA 145 (287)
T ss_dssp HHHTCSEEEEECBCCSCCTTTCTTC-BCCHHHHHHHHHHH
T ss_pred HHhCCeEEEEcCCCCccccCCCCCC-ccCHHHHHHHHHHH
Confidence 9999998888222223 11222223 567766554 4443
No 407
>3kru_A NADH:flavin oxidoreductase/NADH oxidase; homotetramer, dimer of dimers, TIM barrel, thermophilic, OLD enzyme; HET: FMN; 1.60A {Thermoanaerobacter pseudethanolicus AT} SCOP: c.1.4.0 PDB: 3krz_A*
Probab=39.31 E-value=69 Score=29.32 Aligned_cols=79 Identities=15% Similarity=0.080 Sum_probs=49.4
Q ss_pred CchhHHHHHHHHHhCCCcEEEEeccCCCCCC-CCcHHHHHHHHHHHHHhCCCcEEEEeecCCCCCHHHHHHHHHcC-CCe
Q 018731 132 DPMEPENTAKAIASWGVDYIVLTSVDRDDIP-DGGSGHFARTVKAMKKQKPDIMVECLTSDFRGDLRAVETLVHSG-LDV 209 (351)
Q Consensus 132 ~~eei~~~~~~~~~~G~~~I~ltgg~~~~l~-~~~~~~~~~li~~ik~~~p~i~i~~~~~~~~~~~e~l~~L~~aG-~~~ 209 (351)
+.++..+.++.+.+. +..|.++.|....-+ ........++++.+++.. ++.|- ..+...+.+.++.+.+.| +|.
T Consensus 228 ~~~~~~~~a~~l~~~-vd~i~vs~g~~~~~~~~~~~~~~~~~~~~ir~~~-~iPVi--~~Ggi~t~e~Ae~~l~~G~aD~ 303 (343)
T 3kru_A 228 NIDMMVEYINMIKDK-VDLIDVSSGGLLNVDINLYPGYQVKYAETIKKRC-NIKTS--AVGLITTQELAEEILSNERADL 303 (343)
T ss_dssp CHHHHHHHHHHHTTT-CSEEEEECCCSSCCCCCCCTTTTHHHHHHHHHHH-TCEEE--EESSCCCHHHHHHHHHTTSCSE
T ss_pred cHHHHHHHHHHhhcc-ccEEeccCCceEeeeecccCceeehHHHHHHHhc-Ccccc--eeeeeeHHHHHHHHHhchhhHH
Confidence 456778888888888 999988644311100 000123456677777754 34543 344545788888888887 999
Q ss_pred eecch
Q 018731 210 FAHNI 214 (351)
Q Consensus 210 i~~~i 214 (351)
|.++=
T Consensus 304 V~iGR 308 (343)
T 3kru_A 304 VALGR 308 (343)
T ss_dssp EEESH
T ss_pred HHHHH
Confidence 98763
No 408
>2bdq_A Copper homeostasis protein CUTC; alpha beta protein, structural genomics, PSI, protein structure initiative; 2.30A {Streptococcus agalactiae}
Probab=39.28 E-value=69 Score=27.51 Aligned_cols=72 Identities=11% Similarity=0.133 Sum_probs=40.9
Q ss_pred hHHHHHHHHHhCCCcEEEEeccCCCCCCCCcHHHHHHHHHHHHHhCCCcEEEEeecCCCCCHHHHHHHH-HcCCCeeec
Q 018731 135 EPENTAKAIASWGVDYIVLTSVDRDDIPDGGSGHFARTVKAMKKQKPDIMVECLTSDFRGDLRAVETLV-HSGLDVFAH 212 (351)
Q Consensus 135 ei~~~~~~~~~~G~~~I~ltgg~~~~l~~~~~~~~~~li~~ik~~~p~i~i~~~~~~~~~~~e~l~~L~-~aG~~~i~~ 212 (351)
+..+.++.+.+.|+++|.=+|+.+..-...+.+.+.++++. ....+ +++..++. +.+.+..+. +.|++.+..
T Consensus 134 d~~~ale~L~~lGv~rILTSG~~~~~~a~~g~~~L~~Lv~~---a~~ri--~Im~GgGV-~~~Ni~~l~~~tGv~e~H~ 206 (224)
T 2bdq_A 134 DQKKSIDQLVALGFTRILLHGSSNGEPIIENIKHIKALVEY---ANNRI--EIMVGGGV-TAENYQYICQETGVKQAHG 206 (224)
T ss_dssp THHHHHHHHHHTTCCEEEECSCSSCCCGGGGHHHHHHHHHH---HTTSS--EEEECSSC-CTTTHHHHHHHHTCCEEEE
T ss_pred CHHHHHHHHHHcCCCEEECCCCCCCCcHHHHHHHHHHHHHh---hCCCe--EEEeCCCC-CHHHHHHHHHhhCCCEEcc
Confidence 34455777888999998744444321112345566666553 22233 44444443 555555555 689999875
No 409
>3g8r_A Probable spore coat polysaccharide biosynthesis P; structural genomics, protein structure initiative; 2.49A {Chromobacterium violaceum atcc 12472}
Probab=39.00 E-value=2.3e+02 Score=25.96 Aligned_cols=108 Identities=19% Similarity=0.181 Sum_probs=63.0
Q ss_pred CchhHHHHHHHHHhCCCc-----EEEEeccCCC-----------CCC--------CCcHHHHHHHHHHHHHhCCCcEEEE
Q 018731 132 DPMEPENTAKAIASWGVD-----YIVLTSVDRD-----------DIP--------DGGSGHFARTVKAMKKQKPDIMVEC 187 (351)
Q Consensus 132 ~~eei~~~~~~~~~~G~~-----~I~ltgg~~~-----------~l~--------~~~~~~~~~li~~ik~~~p~i~i~~ 187 (351)
+.+-..+.++.+++.|.. .|-|+.-.++ .+. .-+.+++..|.+..++. |+.+-+
T Consensus 19 dle~Ak~lI~~A~~aGad~~~d~avKfQt~~~d~l~~~~~~~~~~~~~~~~~~~~el~~e~~~~L~~~~~~~--Gi~~~s 96 (350)
T 3g8r_A 19 NVEHGVALIRAIRESCQGFDFDFGFKLQYRNLDTFIHSSFKGRDDVKYVKRFEETRLQPEQMQKLVAEMKAN--GFKAIC 96 (350)
T ss_dssp CSHHHHHHHHHHHHHTTTCCSEEEEEEEECCHHHHBCGGGTTCCSSSSHHHHHHTCCCHHHHHHHHHHHHHT--TCEEEE
T ss_pred cHHHHHHHHHHHHHhCCcccCCeeEEccccchhhhcChhccCccHHHHHHHHHHhcCCHHHHHHHHHHHHHc--CCcEEe
Confidence 455556677777776766 7877632211 010 01245566666666665 665533
Q ss_pred eecCCCCCHHHHHHHHHcCCCeeecchhc---hHHHHhhhc--C-----C-CCCHHHHHHHHHHHHHhCCC
Q 018731 188 LTSDFRGDLRAVETLVHSGLDVFAHNIET---VKRLQRIVR--D-----P-RAGYEQSLEVLKHAKLSKKG 247 (351)
Q Consensus 188 ~~~~~~~~~e~l~~L~~aG~~~i~~~ies---~~~~~~~~r--~-----~-~~~~~~~l~~i~~~~~~~~G 247 (351)
++ .|.+.++.|.+.|++.+.++--. +.=+...-+ + + -.+.+++..+++.+.+ .|
T Consensus 97 -t~---fD~~svd~l~~~~v~~~KI~S~~~~N~pLL~~va~~gKPviLstGmstl~Ei~~Ave~i~~--~g 161 (350)
T 3g8r_A 97 -TP---FDEESVDLIEAHGIEIIKIASCSFTDWPLLERIARSDKPVVASTAGARREDIDKVVSFMLH--RG 161 (350)
T ss_dssp -EE---CSHHHHHHHHHTTCCEEEECSSSTTCHHHHHHHHTSCSCEEEECTTCCHHHHHHHHHHHHT--TT
T ss_pred -cc---CCHHHHHHHHHcCCCEEEECcccccCHHHHHHHHhhCCcEEEECCCCCHHHHHHHHHHHHH--cC
Confidence 23 48899999999999999875322 111111111 0 1 1378888888888877 55
No 410
>2vc6_A MOSA, dihydrodipicolinate synthase; DHDPS, TIM barrel, schiff base, lyase; HET: MCL; 1.95A {Sinorhizobium meliloti}
Probab=38.80 E-value=28 Score=31.15 Aligned_cols=78 Identities=12% Similarity=0.001 Sum_probs=48.1
Q ss_pred CCchhHHHHHHHHHhCCCcEEEEec--cCCCCCCCCcHHHHHHHHHHHHHhCC-CcEEEEeecCCCCCH---HHHHHHHH
Q 018731 131 PDPMEPENTAKAIASWGVDYIVLTS--VDRDDIPDGGSGHFARTVKAMKKQKP-DIMVECLTSDFRGDL---RAVETLVH 204 (351)
Q Consensus 131 ~~~eei~~~~~~~~~~G~~~I~ltg--g~~~~l~~~~~~~~~~li~~ik~~~p-~i~i~~~~~~~~~~~---e~l~~L~~ 204 (351)
.+.+...+.++.+.+.|++.+++.| |+...|. .+.-.++++.+.+... .+.|-+-+. ...+. +..+...+
T Consensus 18 iD~~~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls---~~Er~~v~~~~~~~~~gr~pviaGvg-~~~t~~ai~la~~A~~ 93 (292)
T 2vc6_A 18 IDEVALHDLVEWQIEEGSFGLVPCGTTGESPTLS---KSEHEQVVEITIKTANGRVPVIAGAG-SNSTAEAIAFVRHAQN 93 (292)
T ss_dssp ECHHHHHHHHHHHHHTTCSEEETTSGGGTGGGSC---HHHHHHHHHHHHHHHTTSSCBEEECC-CSSHHHHHHHHHHHHH
T ss_pred cCHHHHHHHHHHHHHcCCCEEEECccccChhhCC---HHHHHHHHHHHHHHhCCCCcEEEecC-CccHHHHHHHHHHHHH
Confidence 5667788899999999999998855 5544455 3555666666655422 233322221 11233 45556677
Q ss_pred cCCCeeec
Q 018731 205 SGLDVFAH 212 (351)
Q Consensus 205 aG~~~i~~ 212 (351)
+|.|.+.+
T Consensus 94 ~Gadavlv 101 (292)
T 2vc6_A 94 AGADGVLI 101 (292)
T ss_dssp TTCSEEEE
T ss_pred cCCCEEEE
Confidence 89998754
No 411
>3l5a_A NADH/flavin oxidoreductase/NADH oxidase; OLD yellow enzyme family, OYE-like FMN-binding domain, TIM B oxidoreductase; HET: PGE; 1.65A {Staphylococcus aureus}
Probab=38.76 E-value=27 Score=33.13 Aligned_cols=25 Identities=12% Similarity=0.288 Sum_probs=22.0
Q ss_pred CCCHHHHHHHHHHHHh-CCCCEEeee
Q 018731 259 GESDDDLKEAMADLRS-IDVDILTLG 283 (351)
Q Consensus 259 gEt~e~~~~~l~~l~~-lg~d~i~i~ 283 (351)
|.+.++..+.++.+.+ .|+|.+.+.
T Consensus 260 G~~~ed~~~la~~L~~~~Gvd~I~vs 285 (419)
T 3l5a_A 260 GYTIDEFNQLIDWVMDVSNIQYLAIA 285 (419)
T ss_dssp EECHHHHHHHHHHHHHHSCCCCEEEC
T ss_pred CCCHHHHHHHHHHHHhhcCCcEEEEe
Confidence 4578999999999999 999999885
No 412
>1ccw_A Protein (glutamate mutase); coenzyme B12, radical reaction, TIM-barrel rossman-fold, isomerase; HET: CNC TAR; 1.60A {Clostridium cochlearium} SCOP: c.23.6.1 PDB: 1cb7_A* 1b1a_A 1i9c_A* 1be1_A 1fmf_A 1id8_A*
Probab=38.62 E-value=72 Score=24.74 Aligned_cols=67 Identities=13% Similarity=0.029 Sum_probs=35.6
Q ss_pred HHHHHhCCCcEEEEeccCCCCCCCCcHHHHHHHHHHHHHhCC-CcEEEEeecCCC--CC-HHHHHHHHHcCCCeee
Q 018731 140 AKAIASWGVDYIVLTSVDRDDIPDGGSGHFARTVKAMKKQKP-DIMVECLTSDFR--GD-LRAVETLVHSGLDVFA 211 (351)
Q Consensus 140 ~~~~~~~G~~~I~ltgg~~~~l~~~~~~~~~~li~~ik~~~p-~i~i~~~~~~~~--~~-~e~l~~L~~aG~~~i~ 211 (351)
++.+.+.+.+-|.+++-... ....+.++++.+++..+ ++.+-+-..... -+ ++.-+.++++|+|.+.
T Consensus 47 v~~a~~~~~d~v~lS~~~~~-----~~~~~~~~i~~l~~~g~~~i~v~vGG~~~~~~~~~~~~~~~~~~~G~d~~~ 117 (137)
T 1ccw_A 47 IKAAIETKADAILVSSLYGQ-----GEIDCKGLRQKCDEAGLEGILLYVGGNIVVGKQHWPDVEKRFKDMGYDRVY 117 (137)
T ss_dssp HHHHHHHTCSEEEEEECSST-----HHHHHTTHHHHHHHTTCTTCEEEEEESCSSSSCCHHHHHHHHHHTTCSEEC
T ss_pred HHHHHhcCCCEEEEEecCcC-----cHHHHHHHHHHHHhcCCCCCEEEEECCCcCchHhhhhhHHHHHHCCCCEEE
Confidence 34445556777777654421 13566777777777643 444432111111 01 2235667888888764
No 413
>2rag_A Dipeptidase; aminohydrolase, structural genomics, NYSGXRC, target 9257A, protein structure initiative; 2.00A {Caulobacter crescentus}
Probab=38.60 E-value=1.7e+02 Score=27.54 Aligned_cols=55 Identities=9% Similarity=-0.004 Sum_probs=35.5
Q ss_pred CHHHHHHHHHHHHh-CCCCEEeeecccCCCCCcccccCCCCHHHHHHHHHHHHhcCcce
Q 018731 261 SDDDLKEAMADLRS-IDVDILTLGQYLQPTPLHLTVKEYVTPEKFDFWKAYGESIGFRY 318 (351)
Q Consensus 261 t~e~~~~~l~~l~~-lg~d~i~i~~~l~PTp~~~~~~~~v~~~e~~~~~~~~~~~G~~~ 318 (351)
|.+++.++++.+.+ .|+|+|.++.=+--.. .....-+..++-.+.+.+.+.||..
T Consensus 335 tl~~~~~Hidhi~~~~G~dhVgiGsDfDG~~---~~~gl~dvs~~p~L~~~Ll~rG~se 390 (417)
T 2rag_A 335 DFDLYMKSMLHVLKVAGPKGVCVGADWDGGG---GMDGFEDITDLPKITARLKAEGYSD 390 (417)
T ss_dssp BHHHHHHHHHHHHHHHCTTSEEECCCTTTTC---CBBTBSSGGGTHHHHHHHHHTTCCH
T ss_pred CHHHHHHHHHHHHHhcCCceEEEccCCCCCC---CCCCCCCHHHHHHHHHHHHHcCCCH
Confidence 68999999998876 6899999973220000 0122334556777777777778754
No 414
>2q02_A Putative cytoplasmic protein; structural genomics, joint CEN structural genomics, JCSG, protein structure initiative; 2.40A {Salmonella typhimurium LT2} SCOP: c.1.15.4
Probab=38.49 E-value=74 Score=27.10 Aligned_cols=15 Identities=13% Similarity=0.266 Sum_probs=7.6
Q ss_pred HHHHHHHHcCCCeee
Q 018731 197 RAVETLVHSGLDVFA 211 (351)
Q Consensus 197 e~l~~L~~aG~~~i~ 211 (351)
+..+.+.++|+...+
T Consensus 55 ~~~~~~~~~gl~~~~ 69 (272)
T 2q02_A 55 QVRNLAEKYGLEIVT 69 (272)
T ss_dssp HHHHHHHHTTCEEEE
T ss_pred HHHHHHHHcCCeEEe
Confidence 344455556665433
No 415
>3id7_A Dipeptidase; streptomyces coelicolor A3(2), hydrolase; 1.30A {Streptomyces coelicolor} PDB: 3isi_X* 3itc_A* 3k5x_A* 3s2j_A* 3s2l_A* 3s2m_A* 3s2n_A*
Probab=38.36 E-value=1.3e+02 Score=28.24 Aligned_cols=54 Identities=19% Similarity=0.190 Sum_probs=33.7
Q ss_pred CCHHHHHHHHHHHHh-CCCCEEeeeccc--CC-CCCcccccCCCCHHHHHHHHHHHHhcCcce
Q 018731 260 ESDDDLKEAMADLRS-IDVDILTLGQYL--QP-TPLHLTVKEYVTPEKFDFWKAYGESIGFRY 318 (351)
Q Consensus 260 Et~e~~~~~l~~l~~-lg~d~i~i~~~l--~P-Tp~~~~~~~~v~~~e~~~~~~~~~~~G~~~ 318 (351)
-|.+++.++++.+.+ .|+|+|.++.=+ .+ +|.. .-+...+-.+.+.+.+.||..
T Consensus 294 atl~dv~~HIdhi~~l~G~dhVgiGsDfDG~~~~P~g-----l~dvs~~p~L~~~L~~rG~se 351 (400)
T 3id7_A 294 ATVSTVADHLDHMREVAGVDHLGIGGDYDGTPFTPDG-----LGDVSGYPNLIAELLDRGWSQ 351 (400)
T ss_dssp CBHHHHHHHHHHHHHHHCGGGEEECCCBTTCSCCCBT-----CSSTTCHHHHHHHHHHTTCCH
T ss_pred CCHHHHHHHHHHHHHhcCCceEEECCCCCCCCCCCCC-----CCCHHHHHHHHHHHhhcCCCH
Confidence 467899999999877 589999997422 11 2221 112344556656666667754
No 416
>2hmc_A AGR_L_411P, dihydrodipicolinate synthase; alpha-beta barrel (TIM barrel), structural genomics, PSI-2, structure initiative; HET: MSE; 1.90A {Agrobacterium tumefaciens str}
Probab=38.36 E-value=25 Score=32.40 Aligned_cols=77 Identities=14% Similarity=0.019 Sum_probs=47.0
Q ss_pred CCCchhHHHHHHHHHhCCCcEEEEec--cCCCCCCCCcHHHHHHHHHHHHHhCCCcEEEEeecCCCCCH---HHHHHHHH
Q 018731 130 PPDPMEPENTAKAIASWGVDYIVLTS--VDRDDIPDGGSGHFARTVKAMKKQKPDIMVECLTSDFRGDL---RAVETLVH 204 (351)
Q Consensus 130 ~~~~eei~~~~~~~~~~G~~~I~ltg--g~~~~l~~~~~~~~~~li~~ik~~~p~i~i~~~~~~~~~~~---e~l~~L~~ 204 (351)
..+.+.+.+.++.+.+.|++.|++.| |+...|. .+.-.++++. ... ..+.|-+-+. ...+. +..+...+
T Consensus 43 ~ID~~~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls---~eEr~~vi~~-~~~-grvpViaGvg-~~st~eai~la~~A~~ 116 (344)
T 2hmc_A 43 TPDFDALVRKGKELIADGMSAVVYCGSMGDWPLLT---DEQRMEGVER-LVK-AGIPVIVGTG-AVNTASAVAHAVHAQK 116 (344)
T ss_dssp SBCHHHHHHHHHHHHHTTCCCEEESSGGGTGGGSC---HHHHHHHHHH-HHH-TTCCEEEECC-CSSHHHHHHHHHHHHH
T ss_pred CcCHHHHHHHHHHHHHcCCCEEEeCccCcChhhCC---HHHHHHHHHH-HhC-CCCcEEEecC-CCCHHHHHHHHHHHHh
Confidence 45677788999999999999998865 4544455 3455566655 221 1344333222 11233 45556677
Q ss_pred cCCCeeec
Q 018731 205 SGLDVFAH 212 (351)
Q Consensus 205 aG~~~i~~ 212 (351)
+|.|.+.+
T Consensus 117 ~Gadavlv 124 (344)
T 2hmc_A 117 VGAKGLMV 124 (344)
T ss_dssp HTCSEEEE
T ss_pred cCCCEEEE
Confidence 89998865
No 417
>2v82_A 2-dehydro-3-deoxy-6-phosphogalactonate aldolase; lyase, kdpgal; HET: KDP; 2.1A {Escherichia coli} PDB: 2v81_A*
Probab=38.04 E-value=1.7e+02 Score=24.08 Aligned_cols=70 Identities=13% Similarity=0.165 Sum_probs=46.3
Q ss_pred CCchhHHHHHHHHHhCCCcEEEEeccCCCCCCCCcHHHHHHHHHHHHHhCC-CcEEEEeecCCCCCHHHHHHHHHcCCCe
Q 018731 131 PDPMEPENTAKAIASWGVDYIVLTSVDRDDIPDGGSGHFARTVKAMKKQKP-DIMVECLTSDFRGDLRAVETLVHSGLDV 209 (351)
Q Consensus 131 ~~~eei~~~~~~~~~~G~~~I~ltgg~~~~l~~~~~~~~~~li~~ik~~~p-~i~i~~~~~~~~~~~e~l~~L~~aG~~~ 209 (351)
.+++++.+.++.+.+.|++.|.++-.++ . ..+.++.+++.++ .+.+.. ++..+.+.++...++|.+.
T Consensus 16 ~d~~~~~~~~~~~~~~G~~~i~l~~~~~---~------~~~~i~~i~~~~~~~l~vg~---g~~~~~~~i~~a~~~Gad~ 83 (212)
T 2v82_A 16 ITPDEALAHVGAVIDAGFDAVEIPLNSP---Q------WEQSIPAIVDAYGDKALIGA---GTVLKPEQVDALARMGCQL 83 (212)
T ss_dssp CCHHHHHHHHHHHHHHTCCEEEEETTST---T------HHHHHHHHHHHHTTTSEEEE---ECCCSHHHHHHHHHTTCCE
T ss_pred CCHHHHHHHHHHHHHCCCCEEEEeCCCh---h------HHHHHHHHHHhCCCCeEEEe---ccccCHHHHHHHHHcCCCE
Confidence 3567888889888889999998854332 1 1344555554332 244432 1234788999999999999
Q ss_pred eec
Q 018731 210 FAH 212 (351)
Q Consensus 210 i~~ 212 (351)
|..
T Consensus 84 V~~ 86 (212)
T 2v82_A 84 IVT 86 (212)
T ss_dssp EEC
T ss_pred EEe
Confidence 864
No 418
>3igs_A N-acetylmannosamine-6-phosphate 2-epimerase 2; energy metabolism, sugars, csgid, carbohydrate metabolism, isomerase; HET: MSE 16G; 1.50A {Salmonella enterica subsp} SCOP: c.1.2.0
Probab=38.03 E-value=1.6e+02 Score=25.11 Aligned_cols=120 Identities=12% Similarity=0.089 Sum_probs=68.9
Q ss_pred HHHHHHhCCCcEEEEeccCCCCCCCCcHHHHHHHHHHHHHhCCCcEEEEeecCCCCCHHHHHHHHHcCCCeeecchhchH
Q 018731 139 TAKAIASWGVDYIVLTSVDRDDIPDGGSGHFARTVKAMKKQKPDIMVECLTSDFRGDLRAVETLVHSGLDVFAHNIETVK 218 (351)
Q Consensus 139 ~~~~~~~~G~~~I~ltgg~~~~l~~~~~~~~~~li~~ik~~~p~i~i~~~~~~~~~~~e~l~~L~~aG~~~i~~~ies~~ 218 (351)
.++++.+.|++.|.+.+... .. .+.+.++++.+++. ++.+-+.. .+.+.++.+.++|+|.|..++....
T Consensus 93 ~i~~~~~~Gad~V~l~~~~~--~~---p~~l~~~i~~~~~~--g~~v~~~v----~t~eea~~a~~~Gad~Ig~~~~g~t 161 (232)
T 3igs_A 93 DVDALAQAGAAIIAVDGTAR--QR---PVAVEALLARIHHH--HLLTMADC----SSVDDGLACQRLGADIIGTTMSGYT 161 (232)
T ss_dssp HHHHHHHHTCSEEEEECCSS--CC---SSCHHHHHHHHHHT--TCEEEEEC----CSHHHHHHHHHTTCSEEECTTTTSS
T ss_pred HHHHHHHcCCCEEEECcccc--CC---HHHHHHHHHHHHHC--CCEEEEeC----CCHHHHHHHHhCCCCEEEEcCccCC
Confidence 35556778999887755431 11 13567777788775 54433211 2678889999999999964432211
Q ss_pred HHHhhhcCCCCCHHHHHHHHHHHHHhCCCCeEEEeeeeeCC-CCHHHHHHHHHHHHhCCCCEEeeeccc
Q 018731 219 RLQRIVRDPRAGYEQSLEVLKHAKLSKKGLITKSSIMLGLG-ESDDDLKEAMADLRSIDVDILTLGQYL 286 (351)
Q Consensus 219 ~~~~~~r~~~~~~~~~l~~i~~~~~~~~Gi~v~~~~IvGlg-Et~e~~~~~l~~l~~lg~d~i~i~~~l 286 (351)
...+ . ...++ +.++.+++ .++. +|..-| .|.+++.+. .++|++-+.++..+
T Consensus 162 ~~~~-~--~~~~~----~~i~~l~~--~~ip----vIA~GGI~t~~d~~~~----~~~GadgV~VGsal 213 (232)
T 3igs_A 162 TPDT-P--EEPDL----PLVKALHD--AGCR----VIAEGRYNSPALAAEA----IRYGAWAVTVGSAI 213 (232)
T ss_dssp SSSC-C--SSCCH----HHHHHHHH--TTCC----EEEESCCCSHHHHHHH----HHTTCSEEEECHHH
T ss_pred CCCC-C--CCCCH----HHHHHHHh--cCCc----EEEECCCCCHHHHHHH----HHcCCCEEEEehHh
Confidence 1001 1 12243 45556666 4444 222224 367777655 45799998886443
No 419
>2agk_A 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino) methylideneamino] imidazole-4-carboxamide...; TIM alpha/beta barrel; HET: CIT; 1.30A {Saccharomyces cerevisiae}
Probab=37.90 E-value=39 Score=29.66 Aligned_cols=91 Identities=8% Similarity=0.074 Sum_probs=52.8
Q ss_pred HHHHHHHhCCCcEEEEeccCCCCCCCCcHHHHHHHHHHHHHhCC---CcEEEEeecCCCCCHHHHHHHHHc--CCCeeec
Q 018731 138 NTAKAIASWGVDYIVLTSVDRDDIPDGGSGHFARTVKAMKKQKP---DIMVECLTSDFRGDLRAVETLVHS--GLDVFAH 212 (351)
Q Consensus 138 ~~~~~~~~~G~~~I~ltgg~~~~l~~~~~~~~~~li~~ik~~~p---~i~i~~~~~~~~~~~e~l~~L~~a--G~~~i~~ 212 (351)
+.++.+.+. +.++.+++.+.+-... +. =.++++.+++..| ++.+-+ +++..+.+.+..+.+. |++.+.+
T Consensus 162 e~a~~~~~~-a~~il~t~i~~dG~~~-G~--d~eli~~l~~~~~~~~~iPVIa--sGGi~s~ed~~~l~~~~~G~~gviv 235 (260)
T 2agk_A 162 DTFRELRKY-TNEFLIHAADVEGLCG-GI--DELLVSKLFEWTKDYDDLKIVY--AGGAKSVDDLKLVDELSHGKVDLTF 235 (260)
T ss_dssp HHHHHHTTT-CSEEEEEC-------C-CC--CHHHHHHHHHHHTTCSSCEEEE--ESCCCCTHHHHHHHHHHTTCEEEEC
T ss_pred HHHHHHHHh-cCEEEEEeeccccCcC-CC--CHHHHHHHHHhhcccCCceEEE--eCCCCCHHHHHHHHHhcCCCCEEEe
Confidence 677777888 9999999876532221 11 1356666666543 566644 4566688888888887 9998876
Q ss_pred chhchHHHHhhhcCCCCCHHHHHHHHH
Q 018731 213 NIETVKRLQRIVRDPRAGYEQSLEVLK 239 (351)
Q Consensus 213 ~ies~~~~~~~~r~~~~~~~~~l~~i~ 239 (351)
+--- .++ .++..++++.++.++
T Consensus 236 g~al--~l~---~g~~~~~~~~~~~~~ 257 (260)
T 2agk_A 236 GSSL--DIF---GGNLVKFEDCCRWNE 257 (260)
T ss_dssp CTTB--GGG---TCSSBCHHHHHHHHH
T ss_pred eCCH--HHc---CCCCCCHHHHHHHHH
Confidence 5110 112 122267777776554
No 420
>3eul_A Possible nitrate/nitrite response transcriptional regulatory protein NARL (DNA-binding...; central beta strand flanked by alpha helices; 1.90A {Mycobacterium tuberculosis}
Probab=37.89 E-value=1.3e+02 Score=22.67 Aligned_cols=59 Identities=10% Similarity=0.059 Sum_probs=38.0
Q ss_pred HHHHHHHHHHhCCCcEEEEeecCCCCCHHHHHHHHHcCCCeeecchhchHHHHhhhcCCCCCHHHHHHHHHHHHH
Q 018731 169 FARTVKAMKKQKPDIMVECLTSDFRGDLRAVETLVHSGLDVFAHNIETVKRLQRIVRDPRAGYEQSLEVLKHAKL 243 (351)
Q Consensus 169 ~~~li~~ik~~~p~i~i~~~~~~~~~~~e~l~~L~~aG~~~i~~~ies~~~~~~~~r~~~~~~~~~l~~i~~~~~ 243 (351)
-.++++.+++..|.+.+-+++.. .+.+......++|++.+-. +..+.++..++++.+.+
T Consensus 76 g~~~~~~l~~~~~~~~ii~~s~~--~~~~~~~~~~~~g~~~~l~--------------Kp~~~~~l~~~i~~~~~ 134 (152)
T 3eul_A 76 GAQVAAAVRSYELPTRVLLISAH--DEPAIVYQALQQGAAGFLL--------------KDSTRTEIVKAVLDCAK 134 (152)
T ss_dssp HHHHHHHHHHTTCSCEEEEEESC--CCHHHHHHHHHTTCSEEEE--------------TTCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhcCCCCeEEEEEcc--CCHHHHHHHHHcCCCEEEe--------------cCCCHHHHHHHHHHHHc
Confidence 35677788877777776555543 2667777778888886632 13456666666666654
No 421
>2fli_A Ribulose-phosphate 3-epimerase; (beta/alpha)8-barrel, D- xylitol 5-phosphate, isomerase; HET: DX5; 1.80A {Streptococcus pyogenes} SCOP: c.1.2.2
Probab=37.60 E-value=87 Score=26.01 Aligned_cols=76 Identities=20% Similarity=0.288 Sum_probs=45.9
Q ss_pred CCchhHHHHHHHHHhCCCcEEEEe--ccC-CCCCCCCcHHHHHHHHHHHHHhCCCcE--EEEeecCCCCCHHHHHHHHHc
Q 018731 131 PDPMEPENTAKAIASWGVDYIVLT--SVD-RDDIPDGGSGHFARTVKAMKKQKPDIM--VECLTSDFRGDLRAVETLVHS 205 (351)
Q Consensus 131 ~~~eei~~~~~~~~~~G~~~I~lt--gg~-~~~l~~~~~~~~~~li~~ik~~~p~i~--i~~~~~~~~~~~e~l~~L~~a 205 (351)
.++....+.++.+.+.|++.+.+- .|. +..+. .-.++++.+++.. +.. +....++ .++.++.+.++
T Consensus 13 ~D~~~~~~~~~~~~~~G~~~i~~~~~dg~~~~~~~-----~g~~~i~~i~~~~-~~~~~v~l~v~d---~~~~i~~~~~~ 83 (220)
T 2fli_A 13 ADYANFASELARIEETDAEYVHIDIMDGQFVPNIS-----FGADVVASMRKHS-KLVFDCHLMVVD---PERYVEAFAQA 83 (220)
T ss_dssp SCGGGHHHHHHHHHHTTCCEEEEEEEBSSSSSCBC-----BCHHHHHHHHTTC-CSEEEEEEESSS---GGGGHHHHHHH
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEEeecCCCCCccc-----cCHHHHHHHHHhC-CCCEEEEEeecC---HHHHHHHHHHc
Confidence 345667777888888899876543 232 22111 1146777787754 333 3333322 23467999999
Q ss_pred CCCeeecchh
Q 018731 206 GLDVFAHNIE 215 (351)
Q Consensus 206 G~~~i~~~ie 215 (351)
|+|.+.+..+
T Consensus 84 gad~v~vh~~ 93 (220)
T 2fli_A 84 GADIMTIHTE 93 (220)
T ss_dssp TCSEEEEEGG
T ss_pred CCCEEEEccC
Confidence 9999987643
No 422
>1eye_A DHPS 1, dihydropteroate synthase I; alpha-beta barrel, transferase; HET: PMM; 1.70A {Mycobacterium tuberculosis H37RV} SCOP: c.1.21.1
Probab=37.51 E-value=2.2e+02 Score=25.18 Aligned_cols=28 Identities=18% Similarity=0.197 Sum_probs=16.4
Q ss_pred eeeeeC-CCCHHHHHHHHHHHHhCCCCEEee
Q 018731 253 SIMLGL-GESDDDLKEAMADLRSIDVDILTL 282 (351)
Q Consensus 253 ~~IvGl-gEt~e~~~~~l~~l~~lg~d~i~i 282 (351)
++|--. |++.+ .+++..+.+.++..+-.
T Consensus 102 ~iINdvsg~~~d--~~m~~~~a~~~~~vVlm 130 (280)
T 1eye_A 102 QMVNDVSGGRAD--PAMGPLLAEADVPWVLM 130 (280)
T ss_dssp CEEEETTTTSSC--TTHHHHHHHHTCCEEEE
T ss_pred CEEEECCCCCCC--HHHHHHHHHhCCeEEEE
Confidence 455545 44311 25666777888877665
No 423
>2xwp_A Sirohydrochlorin cobaltochelatase; lyase, beta-alpha-beta, cobalamin biosynthesis, metal-bindin parallel beta sheet; HET: SIR; 1.90A {Salmonella enterica} PDB: 1qgo_A*
Probab=37.49 E-value=2e+02 Score=24.82 Aligned_cols=138 Identities=11% Similarity=0.086 Sum_probs=64.0
Q ss_pred HHHHHHHHhCCCcEEEEeccCCCCCCCCcHHHHHHHHHHHHHhCCCcEEEEeecCCCCCHHHHHHHHHcCCCeeecchhc
Q 018731 137 ENTAKAIASWGVDYIVLTSVDRDDIPDGGSGHFARTVKAMKKQKPDIMVECLTSDFRGDLRAVETLVHSGLDVFAHNIET 216 (351)
Q Consensus 137 ~~~~~~~~~~G~~~I~ltgg~~~~l~~~~~~~~~~li~~ik~~~p~i~i~~~~~~~~~~~e~l~~L~~aG~~~i~~~ies 216 (351)
.+.++.+.+.|+++|++..-.. .+.....++.+.++..+..+|. +.+..|-+ .+++.++.+.++=.+.+.- ...
T Consensus 63 ~~aL~~l~~~G~~~vvV~Pl~l--~~G~~~~di~~~v~~~~~~~~~--i~~~~pl~-~~~~~~~~l~~~l~~~~~~-~~~ 136 (264)
T 2xwp_A 63 LQALQKLAAQGYQDVAIQSLHI--INGDEYEKIVREVQLLRPLFTR--LTLGVPLL-SSHNDYVQLMQALRQQMPS-LRQ 136 (264)
T ss_dssp HHHHHHHHHHTCCEEEEEECCS--SSSHHHHHHHHHHHHHGGGCSE--EEEECCSS-CSHHHHHHHHHHHHTTSCC-CCT
T ss_pred HHHHHHHHhCCCCEEEEEeCcc--cCcHHHHHHHHHHHHHHhhCCc--eEEecCCC-CCHHHHHHHHHHHHHhccc-cCC
Confidence 3345667788999998865442 2221123344444444444554 44434433 3665444444431111100 000
Q ss_pred hHHHHhhhcCCCCCHHHHHHHHH-HHHHhCCCCeEEEeeeeeCCCCHHHHHHHHHHHHhCCCCEEeeeccc
Q 018731 217 VKRLQRIVRDPRAGYEQSLEVLK-HAKLSKKGLITKSSIMLGLGESDDDLKEAMADLRSIDVDILTLGQYL 286 (351)
Q Consensus 217 ~~~~~~~~r~~~~~~~~~l~~i~-~~~~~~~Gi~v~~~~IvGlgEt~e~~~~~l~~l~~lg~d~i~i~~~l 286 (351)
.+.+-=...|...........+. .+++ .|. .+-+|+-|..-.+.+.++.+.+.|...|.+.+++
T Consensus 137 ~~~lvl~gHGs~~~~~~~~~~~a~~l~~--~~~----~v~~g~~e~~P~~~~~l~~l~~~G~~~v~v~P~~ 201 (264)
T 2xwp_A 137 TEKVVFMGHGASHHAFAAYACLDHMMTA--QRF----PARVGAVESYPEVDILIDSLRDEGVTGVHLMPLM 201 (264)
T ss_dssp TEEEEEEECCCSSGGGHHHHHHHHHHHH--TTC----SEEEEESSSSSCHHHHHHHHHHHTCCEEEEEECS
T ss_pred CCeEEEEECCCCchhhHHHHHHHHHHHh--hCC----CEEEEEeCCCCCHHHHHHHHHHCCCCEEEEEeee
Confidence 00100000011111222333333 4444 443 3345553334557778888889999988876554
No 424
>1x7f_A Outer surface protein; structural genomics, unknown function, MCSG, PSI, midwest center for struct genomics; 2.30A {Bacillus cereus atcc 14579} SCOP: b.62.1.2 c.1.8.12
Probab=37.46 E-value=26 Score=32.82 Aligned_cols=74 Identities=15% Similarity=0.161 Sum_probs=43.0
Q ss_pred HHHHHHHHcCCCeeecchhchHHHHhhhcCCCCCHHHHHHHHHHHHHhCCCCeEEEeeeeeC----CCCHHHHHHHHHHH
Q 018731 197 RAVETLVHSGLDVFAHNIETVKRLQRIVRDPRAGYEQSLEVLKHAKLSKKGLITKSSIMLGL----GESDDDLKEAMADL 272 (351)
Q Consensus 197 e~l~~L~~aG~~~i~~~ies~~~~~~~~r~~~~~~~~~l~~i~~~~~~~~Gi~v~~~~IvGl----gEt~e~~~~~l~~l 272 (351)
+.++.++++|+++|.-++.+.++- +....++.-+.++.+++ .|+.+.+|+=-.. |-+.+ .+.++
T Consensus 45 ~Yi~~a~~~Gf~~IFTSL~~~e~~------~~~~~~~~~~l~~~a~~--~g~~vi~DVsp~~~~~Lg~s~~----dl~~f 112 (385)
T 1x7f_A 45 AYISAAARHGFSRIFTCLLSVNRP------KEEIVAEFKEIINHAKD--NNMEVILDVAPAVFDQLGISYS----DLSFF 112 (385)
T ss_dssp HHHHHHHTTTEEEEEEEECCC--------------HHHHHHHHHHHH--TTCEEEEEECTTCC------CC----CTHHH
T ss_pred HHHHHHHHCCCCEEEccCCccCCC------hHHHHHHHHHHHHHHHH--CCCEEEEECCHHHHHHcCCCHH----HHHHH
Confidence 578888889999998776554331 12234556677788888 9999888763211 22222 23455
Q ss_pred HhCCCCEEee
Q 018731 273 RSIDVDILTL 282 (351)
Q Consensus 273 ~~lg~d~i~i 282 (351)
+++|++.+.+
T Consensus 113 ~~lGi~gLRL 122 (385)
T 1x7f_A 113 AELGADGIRL 122 (385)
T ss_dssp HHHTCSEEEE
T ss_pred HHcCCCEEEE
Confidence 6667666555
No 425
>3hdg_A Uncharacterized protein; two-component sensor activity, response regulator, PSI-II, 11227F, NYSGXRC, structural genomics; 2.27A {Wolinella succinogenes} SCOP: c.23.1.0
Probab=37.08 E-value=1.2e+02 Score=22.19 Aligned_cols=59 Identities=10% Similarity=0.116 Sum_probs=38.0
Q ss_pred HHHHHHHHHHhCCCcEEEEeecCCCCCHHHHHHHHHcCCCeeecchhchHHHHhhhcCCCCCHHHHHHHHHHHHH
Q 018731 169 FARTVKAMKKQKPDIMVECLTSDFRGDLRAVETLVHSGLDVFAHNIETVKRLQRIVRDPRAGYEQSLEVLKHAKL 243 (351)
Q Consensus 169 ~~~li~~ik~~~p~i~i~~~~~~~~~~~e~l~~L~~aG~~~i~~~ies~~~~~~~~r~~~~~~~~~l~~i~~~~~ 243 (351)
-.++++.+++..|.+.+-+++.. .+.+......++|++.+-. +..+.++..+.++.+.+
T Consensus 66 g~~~~~~l~~~~~~~~ii~~s~~--~~~~~~~~~~~~g~~~~l~--------------kP~~~~~l~~~i~~~~~ 124 (137)
T 3hdg_A 66 GLEMLDRIKAGGAKPYVIVISAF--SEMKYFIKAIELGVHLFLP--------------KPIEPGRLMETLEDFRH 124 (137)
T ss_dssp HHHHHHHHHHTTCCCEEEECCCC--CCHHHHHHHHHHCCSEECC--------------SSCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhcCCCCcEEEEecC--cChHHHHHHHhCCcceeEc--------------CCCCHHHHHHHHHHHHH
Confidence 35777888887777776555543 2667777888899887621 13455666666655543
No 426
>2pcq_A Putative dihydrodipicolinate synthase; lyase, lysine biosynthesis, dihydrodipicoliante, S genomics, NPPSFA; 2.10A {Thermus thermophilus}
Probab=36.98 E-value=73 Score=28.18 Aligned_cols=44 Identities=16% Similarity=0.024 Sum_probs=22.7
Q ss_pred CCHHHHHHHHHHHHHhCCCCeEEEeeeeeC-CC-CHHHHHHHHHHHHh
Q 018731 229 AGYEQSLEVLKHAKLSKKGLITKSSIMLGL-GE-SDDDLKEAMADLRS 274 (351)
Q Consensus 229 ~~~~~~l~~i~~~~~~~~Gi~v~~~~IvGl-gE-t~e~~~~~l~~l~~ 274 (351)
.+.++.++..+.+.+ .|..--.-+..-+ .- |.+++.++.+.+.+
T Consensus 72 ~~t~~ai~la~~A~~--~Gadavlv~~P~y~~~~~~~~l~~~f~~va~ 117 (283)
T 2pcq_A 72 ETLPQAEGALLEAKA--AGAMALLATPPRYYHGSLGAGLLRYYEALAE 117 (283)
T ss_dssp SSHHHHHHHHHHHHH--HTCSEEEECCCCTTGGGTTTHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHh--cCCCEEEecCCcCCCCCCHHHHHHHHHHHhc
Confidence 356666666666666 5554111111111 23 55666666666666
No 427
>1o66_A 3-methyl-2-oxobutanoate hydroxymethyltransferase; structural genomics; HET: MSE; 1.75A {Neisseria meningitidis serogroup B} SCOP: c.1.12.8 PDB: 1o68_A*
Probab=36.90 E-value=2.2e+02 Score=25.14 Aligned_cols=86 Identities=12% Similarity=0.150 Sum_probs=54.3
Q ss_pred CHHHHHHHHHcCCCeeecchhchHH-HHhhhcCC-CCCHHHHHHHHHHHHHhCCCCeEEEeeeeeC-CCCHHHHHHHHHH
Q 018731 195 DLRAVETLVHSGLDVFAHNIETVKR-LQRIVRDP-RAGYEQSLEVLKHAKLSKKGLITKSSIMLGL-GESDDDLKEAMAD 271 (351)
Q Consensus 195 ~~e~l~~L~~aG~~~i~~~ies~~~-~~~~~r~~-~~~~~~~l~~i~~~~~~~~Gi~v~~~~IvGl-gEt~e~~~~~l~~ 271 (351)
|-..++.+-++|++.+..+ +|+-. .+ ...+. .-+.++.+...+.+.+.-....+.+|+-+|- +.+.++..++...
T Consensus 26 Da~sA~l~e~aG~d~ilvG-dSl~~~~l-G~~dt~~vTldemi~h~~aV~r~~~~~~vvaD~pfgsy~~s~~~a~~na~r 103 (275)
T 1o66_A 26 ESSFAALMDDAGVEMLLVG-DSLGMAVQ-GRKSTLPVSLRDMCYHTECVARGAKNAMIVSDLPFGAYQQSKEQAFAAAAE 103 (275)
T ss_dssp SHHHHHHHHHTTCCEEEEC-TTHHHHTT-CCSSSTTCCHHHHHHHHHHHHHHCSSSEEEEECCTTSSSSCHHHHHHHHHH
T ss_pred CHHHHHHHHHcCCCEEEEC-HHHHHHHc-CCCCCCCCCHHHHHHHHHHHHhhCCCCeEEEECCCCCccCCHHHHHHHHHH
Confidence 7788889999999998654 22221 11 01011 2478888887777765322234667866643 5678877777766
Q ss_pred HHhCCCCEEee
Q 018731 272 LRSIDVDILTL 282 (351)
Q Consensus 272 l~~lg~d~i~i 282 (351)
+.+.|++.+.+
T Consensus 104 l~kaGa~aVkl 114 (275)
T 1o66_A 104 LMAAGAHMVKL 114 (275)
T ss_dssp HHHTTCSEEEE
T ss_pred HHHcCCcEEEE
Confidence 66688777665
No 428
>1o66_A 3-methyl-2-oxobutanoate hydroxymethyltransferase; structural genomics; HET: MSE; 1.75A {Neisseria meningitidis serogroup B} SCOP: c.1.12.8 PDB: 1o68_A*
Probab=36.74 E-value=2.2e+02 Score=25.12 Aligned_cols=16 Identities=19% Similarity=0.025 Sum_probs=7.9
Q ss_pred HHHHHHHHHHHHHhCCCC
Q 018731 231 YEQSLEVLKHAKLSKKGL 248 (351)
Q Consensus 231 ~~~~l~~i~~~~~~~~Gi 248 (351)
.++.++-.+.+.+ +|-
T Consensus 160 a~~~i~rA~a~~e--AGA 175 (275)
T 1o66_A 160 AQALLNDAKAHDD--AGA 175 (275)
T ss_dssp HHHHHHHHHHHHH--TTC
T ss_pred HHHHHHHHHHHHH--cCC
Confidence 4445554444455 554
No 429
>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*
Probab=36.73 E-value=2e+02 Score=24.58 Aligned_cols=73 Identities=18% Similarity=0.226 Sum_probs=42.5
Q ss_pred HHHHHHHhCCCcEEEEeccCCCC---C--------CCCcHHHHHHHHHHHHHhCCCcEEEEeecCCCCCHHHHHHHHHcC
Q 018731 138 NTAKAIASWGVDYIVLTSVDRDD---I--------PDGGSGHFARTVKAMKKQKPDIMVECLTSDFRGDLRAVETLVHSG 206 (351)
Q Consensus 138 ~~~~~~~~~G~~~I~ltgg~~~~---l--------~~~~~~~~~~li~~ik~~~p~i~i~~~~~~~~~~~e~l~~L~~aG 206 (351)
..++.+...|+.+|.+...+.-+ + .+-+......+.+.+.+..|++.++..... .+++.++.+.+ +
T Consensus 45 ~va~~La~~Gv~~i~lvD~d~v~~sNl~Rq~l~~~~diG~~Ka~~~~~~l~~~np~~~v~~~~~~--~~~~~~~~~~~-~ 121 (249)
T 1jw9_B 45 AASQYLASAGVGNLTLLDFDTVSLSNLQRQTLHSDATVGQPKVESARDALTRINPHIAITPVNAL--LDDAELAALIA-E 121 (249)
T ss_dssp HHHHHHHHHTCSEEEEECCCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHHCTTSEEEEECSC--CCHHHHHHHHH-T
T ss_pred HHHHHHHHcCCCeEEEEcCCCcccccCCcccccChhhcCcHHHHHHHHHHHHHCCCcEEEEEecc--CCHhHHHHHHh-C
Confidence 35666778899999886554311 1 011124556667778887888888764432 25554444433 5
Q ss_pred CCeeecc
Q 018731 207 LDVFAHN 213 (351)
Q Consensus 207 ~~~i~~~ 213 (351)
+|.|-..
T Consensus 122 ~DvVi~~ 128 (249)
T 1jw9_B 122 HDLVLDC 128 (249)
T ss_dssp SSEEEEC
T ss_pred CCEEEEe
Confidence 7766433
No 430
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=36.70 E-value=2.1e+02 Score=30.26 Aligned_cols=114 Identities=12% Similarity=0.070 Sum_probs=66.1
Q ss_pred CcHHHHHHHHHHHHHhCCCcEEEEeecCCCCC----HHHHHHHHHcCCCeeecchhchHHHH-hhhc-CCCCCHHHHHHH
Q 018731 164 GGSGHFARTVKAMKKQKPDIMVECLTSDFRGD----LRAVETLVHSGLDVFAHNIETVKRLQ-RIVR-DPRAGYEQSLEV 237 (351)
Q Consensus 164 ~~~~~~~~li~~ik~~~p~i~i~~~~~~~~~~----~e~l~~L~~aG~~~i~~~ies~~~~~-~~~r-~~~~~~~~~l~~ 237 (351)
.+.+.+.+-++.+++..|+..+-+.-..+. + .+.++.+.++|+|.|.+++-+..... +... .-..+.+...+.
T Consensus 616 ~~~~~~~~~i~~~~~~~~~~~~i~~i~~g~-~~~~~~~~a~~~~~~g~d~iein~~~P~~~~~~~~G~~~~~~~~~~~~i 694 (1025)
T 1gte_A 616 KTAAYWCQSVTELKADFPDNIVIASIMCSY-NKNDWMELSRKAEASGADALELNLSCPHGMGERGMGLACGQDPELVRNI 694 (1025)
T ss_dssp SCHHHHHHHHHHHHHHCTTSEEEEEECCCS-CHHHHHHHHHHHHHTTCSEEEEECCCBCCCC-----SBGGGCHHHHHHH
T ss_pred hhHHHHHHHHHHHHhcCCCCCeEEEecCCC-CHHHHHHHHHHHHhcCCCEEEEECCCCCCCCCCCcccccccCHHHHHHH
Confidence 345666666777777666644433221111 2 35677777899999998875432211 1100 001356677777
Q ss_pred HHHHHHhCCCCeEEEeeeeeCCCCHHHHHHHHHHHHhCCCCEEeee
Q 018731 238 LKHAKLSKKGLITKSSIMLGLGESDDDLKEAMADLRSIDVDILTLG 283 (351)
Q Consensus 238 i~~~~~~~~Gi~v~~~~IvGlgEt~e~~~~~l~~l~~lg~d~i~i~ 283 (351)
++.+++. .++.+..-+..+ .+++.+.++.+.+.|+|.+.+.
T Consensus 695 v~~v~~~-~~~Pv~vK~~~~----~~~~~~~a~~~~~~G~d~i~v~ 735 (1025)
T 1gte_A 695 CRWVRQA-VQIPFFAKLTPN----VTDIVSIARAAKEGGADGVTAT 735 (1025)
T ss_dssp HHHHHHH-CSSCEEEEECSC----SSCHHHHHHHHHHHTCSEEEEC
T ss_pred HHHHHHh-hCCceEEEeCCC----hHHHHHHHHHHHHcCCCEEEEe
Confidence 7777762 255544333222 2357777888889999998884
No 431
>2r14_A Morphinone reductase; H-tunnelling, flavoprotein, NADH, hydride transfer, oxidoreductase; HET: FMN TXD; 1.40A {Pseudomonas putida} PDB: 3gx9_A* 1gwj_A*
Probab=36.49 E-value=1.2e+02 Score=28.11 Aligned_cols=74 Identities=11% Similarity=-0.025 Sum_probs=45.8
Q ss_pred chhHHHHHHHHHhCCCcEEEEeccCCCCCCCCcHHHHHHHHHHHHHhCCCcEEEEeecCCCCCHHHHHHHHHcC-CCeee
Q 018731 133 PMEPENTAKAIASWGVDYIVLTSVDRDDIPDGGSGHFARTVKAMKKQKPDIMVECLTSDFRGDLRAVETLVHSG-LDVFA 211 (351)
Q Consensus 133 ~eei~~~~~~~~~~G~~~I~ltgg~~~~l~~~~~~~~~~li~~ik~~~p~i~i~~~~~~~~~~~e~l~~L~~aG-~~~i~ 211 (351)
.++..+.++.+.+.|+..|.+.++........ ...++++.+++.. ++.|-+ ++.. +.+.++.+.+.| +|.|.
T Consensus 254 ~~~~~~la~~le~~Gvd~i~v~~~~~~~~~~~---~~~~~~~~ik~~~-~iPvi~--~Ggi-~~~~a~~~l~~g~aD~V~ 326 (377)
T 2r14_A 254 EAMAFYLAGELDRRGLAYLHFNEPDWIGGDIT---YPEGFREQMRQRF-KGGLIY--CGNY-DAGRAQARLDDNTADAVA 326 (377)
T ss_dssp HHHHHHHHHHHHHTTCSEEEEECCC------C---CCTTHHHHHHHHC-CSEEEE--ESSC-CHHHHHHHHHTTSCSEEE
T ss_pred HHHHHHHHHHHHHcCCCEEEEeCCcccCCCCc---chHHHHHHHHHHC-CCCEEE--ECCC-CHHHHHHHHHCCCceEEe
Confidence 35667778888889999998877532111100 0134566777764 445433 3444 678888887777 89887
Q ss_pred cc
Q 018731 212 HN 213 (351)
Q Consensus 212 ~~ 213 (351)
++
T Consensus 327 ig 328 (377)
T 2r14_A 327 FG 328 (377)
T ss_dssp ES
T ss_pred ec
Confidence 75
No 432
>4djd_C C/Fe-SP, corrinoid/iron-sulfur protein large subunit; TIM barrel, rossmann fold, B12-dependent methyltransferase; HET: B12; 2.38A {Moorella thermoacetica} PDB: 4dje_C* 4djf_C*
Probab=36.46 E-value=2.2e+02 Score=27.10 Aligned_cols=38 Identities=11% Similarity=0.160 Sum_probs=28.9
Q ss_pred HHHHHHHHHHHHhCCCcEEEEeecCCCCCHHHHHHHHHcCCCe
Q 018731 167 GHFARTVKAMKKQKPDIMVECLTSDFRGDLRAVETLVHSGLDV 209 (351)
Q Consensus 167 ~~~~~li~~ik~~~p~i~i~~~~~~~~~~~e~l~~L~~aG~~~ 209 (351)
+.+..+++.+.+.. ++.+.+-+ .+.+.++.-.+++.+.
T Consensus 141 e~~~~vVk~V~e~~-dvPL~IDS----~dpevleaALea~a~~ 178 (446)
T 4djd_C 141 AAFKAAVASVAAAT-QLNLVLMA----DDPDVLKEALAGVADR 178 (446)
T ss_dssp HHHHHHHHHHHTTC-CSEEEEEC----SCHHHHHHHHGGGGGG
T ss_pred HHHHHHHHHHHHhC-CCCEEEec----CCHHHHHHHHHhhcCc
Confidence 78999999998863 66665543 3789999988887654
No 433
>1l6s_A Porphobilinogen synthase; dehydratase, lyase; HET: CME DSB; 1.70A {Escherichia coli} SCOP: c.1.10.3 PDB: 1i8j_A* 1l6y_A* 1b4e_A
Probab=36.22 E-value=67 Score=29.03 Aligned_cols=58 Identities=17% Similarity=0.247 Sum_probs=41.4
Q ss_pred CCCCCCCchhHHHHHHHHHhCCCcEEEEeccCCCCCCC-C------cHHHHHHHHHHHHHhCCCcEE
Q 018731 126 RNPAPPDPMEPENTAKAIASWGVDYIVLTSVDRDDIPD-G------GSGHFARTVKAMKKQKPDIMV 185 (351)
Q Consensus 126 ~~~~~~~~eei~~~~~~~~~~G~~~I~ltgg~~~~l~~-~------~~~~~~~li~~ik~~~p~i~i 185 (351)
.+..+.+.+.+.++++.+.+.|++.|.|-|.. .. .+ . .-.-+.+.++.||+.+|++.|
T Consensus 50 PGv~r~sid~l~~~~~~~~~lGi~~v~LFgvp-~~-Kd~~gs~A~~~~g~v~rair~iK~~~pdl~v 114 (323)
T 1l6s_A 50 PGVMRIPEKHLAREIERIANAGIRSVMTFGIS-HH-TDETGSDAWREDGLVARMSRICKQTVPEMIV 114 (323)
T ss_dssp TTCEEEEGGGHHHHHHHHHHHTCCEEEEEEEC-SS-CBSSCGGGGSTTSHHHHHHHHHHHHCTTSEE
T ss_pred CCceeeCHHHHHHHHHHHHHCCCCEEEEeCCC-CC-CCccccccCCCCCcHHHHHHHHHHHCCCeEE
Confidence 34444567889999999999999999887762 11 11 0 012577899999999999754
No 434
>1ep3_A Dihydroorotate dehydrogenase B (PYRD subunit); heterotetramer, alpha-beta barrel, beta sandwich, FAD domain alpha/beta NADP domain; HET: FMN FAD; 2.10A {Lactococcus lactis} SCOP: c.1.4.1 PDB: 1ep2_A* 1ep1_A*
Probab=36.18 E-value=68 Score=28.38 Aligned_cols=76 Identities=13% Similarity=0.102 Sum_probs=48.3
Q ss_pred hHHHHHHHHHhCCCcEEEEeccC------C-CC----------CCCCc-HHHHHHHHHHHHHhCCCcEEEEeecCCCCCH
Q 018731 135 EPENTAKAIASWGVDYIVLTSVD------R-DD----------IPDGG-SGHFARTVKAMKKQKPDIMVECLTSDFRGDL 196 (351)
Q Consensus 135 ei~~~~~~~~~~G~~~I~ltgg~------~-~~----------l~~~~-~~~~~~li~~ik~~~p~i~i~~~~~~~~~~~ 196 (351)
++.+.++.+.+.|++.|.+++.. . .. +.... .....++++.+++.. ++.|- ..++..+.
T Consensus 177 ~~~~~a~~l~~~G~d~i~v~~~~~g~~i~~~~~~~~~~~~~~g~~g~~~~~~~~~~i~~i~~~~-~ipvi--a~GGI~~~ 253 (311)
T 1ep3_A 177 DIVPIAKAVEAAGADGLTMINTLMGVRFDLKTRQPILANITGGLSGPAIKPVALKLIHQVAQDV-DIPII--GMGGVANA 253 (311)
T ss_dssp CSHHHHHHHHHTTCSEEEECCCEEECCBCTTTCSBSSTTSCEEEESGGGHHHHHHHHHHHHTTC-SSCEE--ECSSCCSH
T ss_pred HHHHHHHHHHHcCCCEEEEeCCCcccccCcccCCccccCCCCcccCccchHHHHHHHHHHHHhc-CCCEE--EECCcCCH
Confidence 44566777888999999996521 0 00 00000 122357777887753 45543 35566688
Q ss_pred HHHHHHHHcCCCeeecc
Q 018731 197 RAVETLVHSGLDVFAHN 213 (351)
Q Consensus 197 e~l~~L~~aG~~~i~~~ 213 (351)
+.+..+.++|.|.|.++
T Consensus 254 ~d~~~~l~~GAd~V~vg 270 (311)
T 1ep3_A 254 QDVLEMYMAGASAVAVG 270 (311)
T ss_dssp HHHHHHHHHTCSEEEEC
T ss_pred HHHHHHHHcCCCEEEEC
Confidence 88888888999999875
No 435
>3d0c_A Dihydrodipicolinate synthase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI-2, structural genomics; 1.90A {Oceanobacillus iheyensis HTE831}
Probab=36.10 E-value=71 Score=28.76 Aligned_cols=78 Identities=10% Similarity=-0.002 Sum_probs=50.6
Q ss_pred CCCchhHHHHHHHHHhCCCcEEEEec--cCCCCCCCCcHHHHHHHHHHHHHhC-CCcEEEEeecCCCCCH---HHHHHHH
Q 018731 130 PPDPMEPENTAKAIASWGVDYIVLTS--VDRDDIPDGGSGHFARTVKAMKKQK-PDIMVECLTSDFRGDL---RAVETLV 203 (351)
Q Consensus 130 ~~~~eei~~~~~~~~~~G~~~I~ltg--g~~~~l~~~~~~~~~~li~~ik~~~-p~i~i~~~~~~~~~~~---e~l~~L~ 203 (351)
..+.+...+.++.+.+.|++.+++.| |+...|. .+.-.++++.+.+.. ..+.|-+-+.. .+. +..+...
T Consensus 29 ~iD~~~l~~lv~~li~~Gv~gl~v~GtTGE~~~Ls---~eEr~~vi~~~~~~~~grvpViaGvg~--st~~ai~la~~A~ 103 (314)
T 3d0c_A 29 EIDWKGLDDNVEFLLQNGIEVIVPNGNTGEFYALT---IEEAKQVATRVTELVNGRATVVAGIGY--SVDTAIELGKSAI 103 (314)
T ss_dssp CBCHHHHHHHHHHHHHTTCSEECTTSGGGTGGGSC---HHHHHHHHHHHHHHHTTSSEEEEEECS--SHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHcCCCEEEECcccCChhhCC---HHHHHHHHHHHHHHhCCCCeEEecCCc--CHHHHHHHHHHHH
Confidence 45677888999999999999998755 5544455 355666776666542 23555433322 244 4555567
Q ss_pred HcCCCeeec
Q 018731 204 HSGLDVFAH 212 (351)
Q Consensus 204 ~aG~~~i~~ 212 (351)
++|.|.+.+
T Consensus 104 ~~Gadavlv 112 (314)
T 3d0c_A 104 DSGADCVMI 112 (314)
T ss_dssp HTTCSEEEE
T ss_pred HcCCCEEEE
Confidence 789998854
No 436
>3tqv_A Nicotinate-nucleotide pyrophosphorylase; glycosyltransferase, transferase; 2.62A {Francisella tularensis subsp}
Probab=35.91 E-value=1.9e+02 Score=25.71 Aligned_cols=86 Identities=16% Similarity=0.244 Sum_probs=51.6
Q ss_pred HHHHHHHHHHhCCCcEEEEeecCCCCCHHHHHHHHHcCCCeeecchhchHHHHhhhcCCCCCHHHHHHHHHHHHHhCCCC
Q 018731 169 FARTVKAMKKQKPDIMVECLTSDFRGDLRAVETLVHSGLDVFAHNIETVKRLQRIVRDPRAGYEQSLEVLKHAKLSKKGL 248 (351)
Q Consensus 169 ~~~li~~ik~~~p~i~i~~~~~~~~~~~e~l~~L~~aG~~~i~~~ies~~~~~~~~r~~~~~~~~~l~~i~~~~~~~~Gi 248 (351)
+.+.++..++..|+..|++... +.+.++...++|.|.|.+. ..+.++..++++.++ ..+
T Consensus 185 i~~Av~~ar~~~~~~~IeVEv~----tl~ea~eAl~aGaD~I~LD--------------n~~~~~l~~av~~~~---~~v 243 (287)
T 3tqv_A 185 IAKAVTKAKKLDSNKVVEVEVT----NLDELNQAIAAKADIVMLD--------------NFSGEDIDIAVSIAR---GKV 243 (287)
T ss_dssp HHHHHHHHHHHCTTSCEEEEES----SHHHHHHHHHTTCSEEEEE--------------SCCHHHHHHHHHHHT---TTC
T ss_pred HHHHHHHHHhhCCCCcEEEEeC----CHHHHHHHHHcCCCEEEEc--------------CCCHHHHHHHHHhhc---CCc
Confidence 4566667777666666665443 4577777888999988652 235555555555543 233
Q ss_pred eEEEeeeeeCCCCHHHHHHHHHHHHhCCCCEEeee
Q 018731 249 ITKSSIMLGLGESDDDLKEAMADLRSIDVDILTLG 283 (351)
Q Consensus 249 ~v~~~~IvGlgEt~e~~~~~l~~l~~lg~d~i~i~ 283 (351)
.+.+ -| |-|.+.+ ..+.+.|+|.++++
T Consensus 244 ~iea---SG-GIt~~~i----~~~a~tGVD~IsvG 270 (287)
T 3tqv_A 244 ALEV---SG-NIDRNSI----VAIAKTGVDFISVG 270 (287)
T ss_dssp EEEE---ES-SCCTTTH----HHHHTTTCSEEECS
T ss_pred eEEE---EC-CCCHHHH----HHHHHcCCCEEEEC
Confidence 3211 12 3344444 33567999999986
No 437
>1yad_A Regulatory protein TENI; TIM barrel, transcription; 2.10A {Bacillus subtilis} PDB: 3qh2_A*
Probab=35.68 E-value=97 Score=25.87 Aligned_cols=70 Identities=19% Similarity=0.144 Sum_probs=40.0
Q ss_pred HHHHHhCCCcEEEEeccCCCCCCCCcHHHHHHHHHHHHHhCCCcEEEEeecCCCCCHHHHHHHHHcCCCeeecc
Q 018731 140 AKAIASWGVDYIVLTSVDRDDIPDGGSGHFARTVKAMKKQKPDIMVECLTSDFRGDLRAVETLVHSGLDVFAHN 213 (351)
Q Consensus 140 ~~~~~~~G~~~I~ltgg~~~~l~~~~~~~~~~li~~ik~~~p~i~i~~~~~~~~~~~e~l~~L~~aG~~~i~~~ 213 (351)
+..+...|++.|.+....+.....+....-.+.++.+++.. ++.+.+ .+++ +.+.+..+.++|.+.+.++
T Consensus 123 ~~~a~~~gaD~i~~~~~f~~~~~~g~~~~~~~~l~~~~~~~-~~pvia--~GGI-~~~nv~~~~~~Ga~gv~vg 192 (221)
T 1yad_A 123 AVQAEKEDADYVLFGHVFETDCKKGLEGRGVSLLSDIKQRI-SIPVIA--IGGM-TPDRLRDVKQAGADGIAVM 192 (221)
T ss_dssp HHHHHHTTCSEEEEECCC----------CHHHHHHHHHHHC-CSCEEE--ESSC-CGGGHHHHHHTTCSEEEES
T ss_pred HHHHHhCCCCEEEECCccccCCCCCCCCCCHHHHHHHHHhC-CCCEEE--ECCC-CHHHHHHHHHcCCCEEEEh
Confidence 44556789999988543211110000011235566666543 444433 4565 8888999999999998775
No 438
>2dqw_A Dihydropteroate synthase; dimer, structural genomics; 1.65A {Thermus thermophilus} PDB: 2dza_A* 2dzb_A*
Probab=35.64 E-value=2.4e+02 Score=25.14 Aligned_cols=27 Identities=15% Similarity=0.222 Sum_probs=15.1
Q ss_pred eeeeeC-CCCHHHHHHHHHHHHhCCCCEEee
Q 018731 253 SIMLGL-GESDDDLKEAMADLRSIDVDILTL 282 (351)
Q Consensus 253 ~~IvGl-gEt~e~~~~~l~~l~~lg~d~i~i 282 (351)
++|--. |+.++ +.+..+.+.++..+-.
T Consensus 125 ~iINdVsg~~d~---~m~~v~a~~~~~vVlm 152 (294)
T 2dqw_A 125 HLLNDVTGLRDE---RMVALAARHGVAAVVM 152 (294)
T ss_dssp SEEECSSCSCCH---HHHHHHHHHTCEEEEE
T ss_pred CEEEECCCCCCh---HHHHHHHHhCCCEEEE
Confidence 355544 44333 4556667778766554
No 439
>4i6k_A Amidohydrolase family protein; enzyme function initiative, isomerase, structural; HET: CIT; 2.28A {Acinetobacter baumannii}
Probab=35.49 E-value=2.2e+02 Score=24.73 Aligned_cols=119 Identities=9% Similarity=0.067 Sum_probs=65.8
Q ss_pred hHHHHHHHHHhCCCcEEEEeccCCCCCCCCcHHHHHHHHHHHHHhCCC-c-EEEEeecCCCCCHHHHHHHHHcCCCeeec
Q 018731 135 EPENTAKAIASWGVDYIVLTSVDRDDIPDGGSGHFARTVKAMKKQKPD-I-MVECLTSDFRGDLRAVETLVHSGLDVFAH 212 (351)
Q Consensus 135 ei~~~~~~~~~~G~~~I~ltgg~~~~l~~~~~~~~~~li~~ik~~~p~-i-~i~~~~~~~~~~~e~l~~L~~aG~~~i~~ 212 (351)
.+.+.++.+.+.|+..+++.+....... .+++.+++ ++ +|+ + .+....|+ .+.+.++.+.+.|+..|-+
T Consensus 54 ~~e~~l~~~~~~GV~~~V~v~~~~~~~~---n~~~~~~~---~~-~p~r~~g~~~v~P~--~~~~eL~~l~~~gv~Gi~l 124 (294)
T 4i6k_A 54 TVQSFISHLDEHNFTHGVLVQPSFLGTN---NQAMLNAI---QQ-YPDRLKGIAVVQHT--TTFNELVNLKAQGIVGVRL 124 (294)
T ss_dssp CHHHHHHHHHHTTCCEEEEECCGGGTTC---CHHHHHHH---HH-STTTEEEEECCCTT--CCHHHHHHHHTTTEEEEEE
T ss_pred CHHHHHHHHHHcCCCeEEEecCcccccc---hHHHHHHH---HH-CCCeEEEEEEeCCc--ccHHHHHHHHHCCCcEEEe
Confidence 4556666777899999888754321111 14555544 33 455 2 22223343 2567888898888877765
Q ss_pred chhchHHHHhhhcCCCCCHHHHHHHHHHHHHhCCCCeEEEeeeeeCCCCHHHHHHHHHHHHhCCC
Q 018731 213 NIETVKRLQRIVRDPRAGYEQSLEVLKHAKLSKKGLITKSSIMLGLGESDDDLKEAMADLRSIDV 277 (351)
Q Consensus 213 ~ies~~~~~~~~r~~~~~~~~~l~~i~~~~~~~~Gi~v~~~~IvGlgEt~e~~~~~l~~l~~lg~ 277 (351)
+.... ..+...-+.+...++.+.+ .|+.+... ++ ..++.+....+++.++
T Consensus 125 ~~~~~-------~~~~~~~~~~~~~~~~a~~--~glpv~iH--~~----~~~l~~~~~~l~~~p~ 174 (294)
T 4i6k_A 125 NLFGL-------NLPALNTPDWQKFLRNVES--LNWQVELH--AP----PKYLVQLLPQLNEYSF 174 (294)
T ss_dssp ECTTS-------CCCCSSSHHHHHHHHHHHH--TTCEEEEE--CC----HHHHHHHHHHHTTSSS
T ss_pred ccCCC-------CCCCcccHHHHHHHHHHHH--cCCEEEEe--eC----cchHHHHHHHHHHCCC
Confidence 43110 0012233566677777777 77764332 11 2445566666667664
No 440
>1ea9_C Cyclomaltodextrinase; hydrolase, glycosidase; 3.2A {Bacillus SP} SCOP: b.1.18.2 b.71.1.1 c.1.8.1
Probab=35.47 E-value=65 Score=31.70 Aligned_cols=60 Identities=8% Similarity=0.156 Sum_probs=42.8
Q ss_pred CCCHHHHHHHHHHHHhCCCCEEeeecccCCCCCc---------ccccCCCCHHHHHHHHHHHHhcCccee
Q 018731 259 GESDDDLKEAMADLRSIDVDILTLGQYLQPTPLH---------LTVKEYVTPEKFDFWKAYGESIGFRYV 319 (351)
Q Consensus 259 gEt~e~~~~~l~~l~~lg~d~i~i~~~l~PTp~~---------~~~~~~v~~~e~~~~~~~~~~~G~~~~ 319 (351)
|-+...+.+.|+.|+++|++.|.+++.. +.+.. .....+-+++++.++.+.+.+.|+.-+
T Consensus 168 ~Gd~~gi~~~LdyLk~LGvt~I~L~Pi~-~~~~~~GYd~~dy~~idp~~Gt~~df~~lv~~~H~~Gi~Vi 236 (583)
T 1ea9_C 168 GGDLQGVIDHLDHLSKLGVNAVYFTPLF-KATTNHKYDTEDYFQIDPQFGDKDTLKKLVDLCHERGIRVL 236 (583)
T ss_dssp CCCHHHHHHTHHHHHHHTCSEEEECCCS-SCSSSSTTSCSCTTCCCTTTCCHHHHHHHHHHHTTTTCEEE
T ss_pred CcCHHHHHHhhHHHHHcCCCEEEECCCc-cCCCCCCcCcccccccCcccCCHHHHHHHHHHHHHCCCEEE
Confidence 4577888888999999999998886544 22211 111234578999999999999998754
No 441
>1qtw_A Endonuclease IV; DNA repair enzyme, TIM barrel, trinuclear Zn cluster, hydrolase; 1.02A {Escherichia coli} SCOP: c.1.15.1 PDB: 1qum_A* 2nqh_A 2nqj_A* 2nq9_A*
Probab=35.45 E-value=1.2e+02 Score=25.97 Aligned_cols=17 Identities=12% Similarity=0.261 Sum_probs=10.7
Q ss_pred HHHHHHHHHHHHHhCCCCe
Q 018731 231 YEQSLEVLKHAKLSKKGLI 249 (351)
Q Consensus 231 ~~~~l~~i~~~~~~~~Gi~ 249 (351)
.+...+.++.+.+ .|..
T Consensus 88 ~~~~~~~i~~A~~--lGa~ 104 (285)
T 1qtw_A 88 RDAFIDEMQRCEQ--LGLS 104 (285)
T ss_dssp HHHHHHHHHHHHH--TTCC
T ss_pred HHHHHHHHHHHHH--cCCC
Confidence 4455566777777 6664
No 442
>3i4e_A Isocitrate lyase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.69A {Burkholderia pseudomallei}
Probab=35.41 E-value=2.9e+02 Score=26.14 Aligned_cols=78 Identities=17% Similarity=0.082 Sum_probs=51.8
Q ss_pred chhHHHHHHHHHhCCCcEEEEeccCCCCCCCCcHHHHHHHHHHHHHhCCCcEEEE-eecCCC----CCHHH----HHHHH
Q 018731 133 PMEPENTAKAIASWGVDYIVLTSVDRDDIPDGGSGHFARTVKAMKKQKPDIMVEC-LTSDFR----GDLRA----VETLV 203 (351)
Q Consensus 133 ~eei~~~~~~~~~~G~~~I~ltgg~~~~l~~~~~~~~~~li~~ik~~~p~i~i~~-~~~~~~----~~~e~----l~~L~ 203 (351)
.++.++-+.++.+ |.+-|++-.+.+ + .+.+.++++.++...|...+.. .+|.+. ++++. .+.|.
T Consensus 270 ldeAI~Ra~AY~~-GAD~if~E~~~~----~--~eei~~f~~~v~~~~P~~~l~~~~sPsfnw~~~~~~~~~~~f~~eL~ 342 (439)
T 3i4e_A 270 LEQAISRGLAYAP-YADLIWCETGKP----D--LEYAKKFAEAIHKQFPGKLLSYNCSPSFNWKKNLDDATIAKFQKELG 342 (439)
T ss_dssp HHHHHHHHHHHTT-TCSEEEECCSSC----C--HHHHHHHHHHHHHHSTTCEEEEECCSSSCHHHHSCHHHHHTHHHHHH
T ss_pred HHHHHHHHHHHHh-hCCEEEecCCCC----C--HHHHHHHHHHhcccCCceEEeeCCCCCCcCcccCCHHHHHHHHHHHH
Confidence 4666666667777 999998843332 2 4789999999988777633332 245442 23333 56899
Q ss_pred HcCCCeeecchhch
Q 018731 204 HSGLDVFAHNIETV 217 (351)
Q Consensus 204 ~aG~~~i~~~ies~ 217 (351)
++|+..+.+.+-.+
T Consensus 343 ~lGv~~v~~~la~~ 356 (439)
T 3i4e_A 343 AMGYKFQFITLAGF 356 (439)
T ss_dssp HHTCCEEEETTHHH
T ss_pred HcCCeEEEeChHHH
Confidence 99999998765443
No 443
>1vyr_A Pentaerythritol tetranitrate reductase; oxidoreductase, flavoenzyme, explosive degradation, steroid binding; HET: FMN TNF; 0.9A {Enterobacter cloacae} SCOP: c.1.4.1 PDB: 1gvq_A* 1gvr_A* 1gvs_A* 1h50_A* 1h51_A* 1h60_A* 1h61_A* 1h62_A* 1h63_A* 1gvo_A* 2aba_A* 3f03_K* 3kft_A* 3p7y_A* 3p80_A* 3p81_A* 3p62_A* 3p8i_A* 2abb_A* 3p67_A* ...
Probab=35.39 E-value=98 Score=28.49 Aligned_cols=25 Identities=12% Similarity=0.199 Sum_probs=21.2
Q ss_pred CCCHHHHHHHHHHHHhCCCCEEeee
Q 018731 259 GESDDDLKEAMADLRSIDVDILTLG 283 (351)
Q Consensus 259 gEt~e~~~~~l~~l~~lg~d~i~i~ 283 (351)
+.+.++..+.++.+.+.|+|.+.+.
T Consensus 247 ~~~~~~~~~~a~~l~~~G~d~i~v~ 271 (364)
T 1vyr_A 247 PNEEADALYLIEELAKRGIAYLHMS 271 (364)
T ss_dssp TTHHHHHHHHHHHHHHTTCSEEEEE
T ss_pred CCCHHHHHHHHHHHHHhCCCEEEEe
Confidence 3467788889999999999999985
No 444
>3tsm_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, ssgcid, seattle structural GE center for infectious disease, lyase; 2.15A {Brucella melitensis} SCOP: c.1.2.0
Probab=35.36 E-value=1.2e+02 Score=26.84 Aligned_cols=68 Identities=12% Similarity=0.032 Sum_probs=39.5
Q ss_pred HHHHHHhCCCcEEEEeccCCCCCCCCcHHHHHHHHHHHHHhCC-CcEEEEeecCCCCCHHHHHHHHHcCCCeeecc
Q 018731 139 TAKAIASWGVDYIVLTSVDRDDIPDGGSGHFARTVKAMKKQKP-DIMVECLTSDFRGDLRAVETLVHSGLDVFAHN 213 (351)
Q Consensus 139 ~~~~~~~~G~~~I~ltgg~~~~l~~~~~~~~~~li~~ik~~~p-~i~i~~~~~~~~~~~e~l~~L~~aG~~~i~~~ 213 (351)
+++.+.+.|.+.|-++.-+...+. -+.+...++++. .| ++.+-+ -.+..+++.+..+.++|++.+.+|
T Consensus 181 El~~A~~~ga~iIGinnr~l~t~~-~dl~~~~~L~~~----ip~~~~vIa--esGI~t~edv~~l~~~Ga~gvLVG 249 (272)
T 3tsm_A 181 EMERALKLSSRLLGVNNRNLRSFE-VNLAVSERLAKM----APSDRLLVG--ESGIFTHEDCLRLEKSGIGTFLIG 249 (272)
T ss_dssp HHHHHTTSCCSEEEEECBCTTTCC-BCTHHHHHHHHH----SCTTSEEEE--ESSCCSHHHHHHHHTTTCCEEEEC
T ss_pred HHHHHHhcCCCEEEECCCCCccCC-CChHHHHHHHHh----CCCCCcEEE--ECCCCCHHHHHHHHHcCCCEEEEc
Confidence 344455678887765433221121 123444444433 33 344322 345568999999999999999886
No 445
>1mzh_A Deoxyribose-phosphate aldolase; alpha-beta barrel, structural genomics, PSI, protein structure initiative; 2.00A {Aquifex aeolicus} SCOP: c.1.10.1
Probab=35.33 E-value=1.9e+02 Score=24.32 Aligned_cols=76 Identities=16% Similarity=0.112 Sum_probs=0.0
Q ss_pred CCchhHHHHHHHHHhCCCcEEEEeccCCCCCCCCcHHHHHHHHHHHHHhCCCcEEEEeecCCCCCHHHHHHHHHcCCCee
Q 018731 131 PDPMEPENTAKAIASWGVDYIVLTSVDRDDIPDGGSGHFARTVKAMKKQKPDIMVECLTSDFRGDLRAVETLVHSGLDVF 210 (351)
Q Consensus 131 ~~~eei~~~~~~~~~~G~~~I~ltgg~~~~l~~~~~~~~~~li~~ik~~~p~i~i~~~~~~~~~~~e~l~~L~~aG~~~i 210 (351)
.+.+++.+.++.+.+.|++.|....|-. -.....+.+..+.+.+.. ++.|-. .++..+.+.+..+.++|.++|
T Consensus 129 l~~~~~~~~a~~a~eaGad~I~tstg~~--~gga~~~~i~~v~~~v~~---~ipVia--~GGI~t~~da~~~l~aGA~~i 201 (225)
T 1mzh_A 129 LNEEEIKKAVEICIEAGADFIKTSTGFA--PRGTTLEEVRLIKSSAKG---RIKVKA--SGGIRDLETAISMIEAGADRI 201 (225)
T ss_dssp CCHHHHHHHHHHHHHHTCSEEECCCSCS--SSCCCHHHHHHHHHHHTT---SSEEEE--ESSCCSHHHHHHHHHTTCSEE
T ss_pred CCHHHHHHHHHHHHHhCCCEEEECCCCC--CCCCCHHHHHHHHHHhCC---CCcEEE--ECCCCCHHHHHHHHHhCchHH
Q ss_pred ecc
Q 018731 211 AHN 213 (351)
Q Consensus 211 ~~~ 213 (351)
..+
T Consensus 202 G~s 204 (225)
T 1mzh_A 202 GTS 204 (225)
T ss_dssp EES
T ss_pred HHc
No 446
>1lwj_A 4-alpha-glucanotransferase; alpha-amylase family, acarbose, (beta/alpha)8 barrel; HET: ACG; 2.50A {Thermotoga maritima} SCOP: b.71.1.1 c.1.8.1 PDB: 1lwh_A*
Probab=35.13 E-value=39 Score=31.87 Aligned_cols=37 Identities=8% Similarity=0.026 Sum_probs=29.8
Q ss_pred CCHHHHHHHHHHHHHhCCCCeEEEeeeeeC-CCCHHHHHH
Q 018731 229 AGYEQSLEVLKHAKLSKKGLITKSSIMLGL-GESDDDLKE 267 (351)
Q Consensus 229 ~~~~~~l~~i~~~~~~~~Gi~v~~~~IvGl-gEt~e~~~~ 267 (351)
.+.++..+.++.+++ .||+|-.++++.+ +..-.-+.+
T Consensus 67 Gt~~df~~lv~~aH~--~Gi~VilD~V~NH~~~~~~~f~~ 104 (441)
T 1lwj_A 67 GSEREFKEMIEAFHD--SGIKVVLDLPIHHTGFLHTWFQK 104 (441)
T ss_dssp CCHHHHHHHHHHHHH--TTCEEEEEECTTBCCTTCHHHHH
T ss_pred CCHHHHHHHHHHHHH--CCCEEEEEeCCCcccCchHHHHH
Confidence 488999999999999 9999999999988 544333333
No 447
>1p0k_A Isopentenyl-diphosphate delta-isomerase; terpene biosynthesis, dimethylallyl diphosphate, flavoprotein; 1.90A {Bacillus subtilis} SCOP: c.1.4.1 PDB: 1p0n_A*
Probab=34.91 E-value=2.5e+02 Score=25.23 Aligned_cols=133 Identities=12% Similarity=0.159 Sum_probs=63.3
Q ss_pred HHHHHHHhCCCcEEEEeccCCCCCCCCcHHHHHHHHHHHHHhCCCcEEEEeecCCCCCHHHHHHHHHcCCCeeecchhch
Q 018731 138 NTAKAIASWGVDYIVLTSVDRDDIPDGGSGHFARTVKAMKKQKPDIMVECLTSDFRGDLRAVETLVHSGLDVFAHNIETV 217 (351)
Q Consensus 138 ~~~~~~~~~G~~~I~ltgg~~~~l~~~~~~~~~~li~~ik~~~p~i~i~~~~~~~~~~~e~l~~L~~aG~~~i~~~ies~ 217 (351)
..++.+.+.|+.. .++... ..+.+.+...+ ++.+++..++..+-.....+...++..+.+.++|++.|.+++...
T Consensus 77 ~~a~aa~~~G~~~-~~~~~~-~~l~~~~~~~~---~~~~~~~~~~~pv~~~i~~~~~~~~~~~~~~~~gad~i~i~~~~~ 151 (349)
T 1p0k_A 77 SLARAASQAGIPL-AVGSQM-SALKDPSERLS---YEIVRKENPNGLIFANLGSEATAAQAKEAVEMIGANALQIHLNVI 151 (349)
T ss_dssp HHHHHHHHHTCCE-ECCCCT-TTTTCHHHHHH---HHHHHHHCSSSCEEEEEETTCCHHHHHHHHHHTTCSEEEEEECTT
T ss_pred HHHHHHHHcCCcE-Eeccch-hcccCcccccc---eehhhhhCCCceeEEeecCCCCHHHHHHHHHhcCCCeEEecccch
Confidence 4455566778663 333222 12322111223 333444444544333222122134455556678999988776654
Q ss_pred HHHHhhhcCCCCCHHHHHHHHHHHHHhCCCCeEEEeeeeeCCCCHHHHHHHHHHHHhCCCCEEeee
Q 018731 218 KRLQRIVRDPRAGYEQSLEVLKHAKLSKKGLITKSSIMLGLGESDDDLKEAMADLRSIDVDILTLG 283 (351)
Q Consensus 218 ~~~~~~~r~~~~~~~~~l~~i~~~~~~~~Gi~v~~~~IvGlgEt~e~~~~~l~~l~~lg~d~i~i~ 283 (351)
.+...... ..+++.+++.++.+++. .++.+..-+ +|.+-+.++ ++.+.+.|+|.+.+.
T Consensus 152 ~~~~~~~~--~~~~~~~~~~i~~vr~~-~~~Pv~vK~-~~~~~~~~~----a~~a~~~Gad~I~v~ 209 (349)
T 1p0k_A 152 QEIVMPEG--DRSFSGALKRIEQICSR-VSVPVIVKE-VGFGMSKAS----AGKLYEAGAAAVDIG 209 (349)
T ss_dssp TTC----------CTTHHHHHHHHHHH-CSSCEEEEE-ESSCCCHHH----HHHHHHHTCSEEEEE
T ss_pred hhhcCCCC--CcchHHHHHHHHHHHHH-cCCCEEEEe-cCCCCCHHH----HHHHHHcCCCEEEEc
Confidence 33211000 11112255666666542 355543322 255556544 466778899998884
No 448
>1lt8_A Betaine-homocysteine methyltransferase; homocysteine metabolism, homocysteinemia, zinc, thiol alkyl transfer; HET: CBH CIT; 2.05A {Homo sapiens} SCOP: c.1.26.1 PDB: 1lt7_A* 1umy_A
Probab=34.59 E-value=1.8e+02 Score=27.23 Aligned_cols=37 Identities=8% Similarity=0.023 Sum_probs=19.7
Q ss_pred CCCHHHHHHHHHHHHHhCCCCeEEEeeeeeC--CCCHHHHHHHHHHHHh
Q 018731 228 RAGYEQSLEVLKHAKLSKKGLITKSSIMLGL--GESDDDLKEAMADLRS 274 (351)
Q Consensus 228 ~~~~~~~l~~i~~~~~~~~Gi~v~~~~IvGl--gEt~e~~~~~l~~l~~ 274 (351)
+.+.++.+..+.. .|+ ..+|+ .-..+++...++.+.+
T Consensus 195 G~~~~~~~~~l~~-----~~~-----~avGvNC~~gP~~~~~~l~~l~~ 233 (406)
T 1lt8_A 195 GVPPGEAAVRLVK-----AGA-----SIIGVNCHFDPTISLKTVKLMKE 233 (406)
T ss_dssp CCCHHHHHHHHHT-----TTC-----SEEEEESSSCHHHHHHHHHHHHH
T ss_pred CCcHHHHHHHhhc-----CCC-----CEEEecCCCCHHHHHHHHHHHHH
Confidence 5566666554433 343 13455 2346667777666664
No 449
>3o63_A Probable thiamine-phosphate pyrophosphorylase; thiamin biosynthesis, TIM barrel, transferase; 2.35A {Mycobacterium tuberculosis}
Probab=34.45 E-value=49 Score=28.71 Aligned_cols=67 Identities=12% Similarity=0.030 Sum_probs=40.4
Q ss_pred HHHHHhCCCcEEEEeccCCCCCC----CCcHHHHHHHHHHHHHhC-CCcEEEEeecCCCCCHHHHHHHHHcCCCeeecc
Q 018731 140 AKAIASWGVDYIVLTSVDRDDIP----DGGSGHFARTVKAMKKQK-PDIMVECLTSDFRGDLRAVETLVHSGLDVFAHN 213 (351)
Q Consensus 140 ~~~~~~~G~~~I~ltgg~~~~l~----~~~~~~~~~li~~ik~~~-p~i~i~~~~~~~~~~~e~l~~L~~aG~~~i~~~ 213 (351)
+....+.|+++|.+....++... ..+ .+.++.+++.. .++.+-+ -+++ +.+.+..++++|.+.|.++
T Consensus 148 a~~A~~~GaDyI~vgpvf~T~tK~~~~~~g----l~~l~~~~~~~~~~iPvvA--iGGI-~~~ni~~~~~aGa~gvav~ 219 (243)
T 3o63_A 148 VAAAAAGDADYFCVGPCWPTPTKPGRAAPG----LGLVRVAAELGGDDKPWFA--IGGI-NAQRLPAVLDAGARRIVVV 219 (243)
T ss_dssp HHHHHHSSCSEEEECCSSCCCC-----CCC----HHHHHHHHTC---CCCEEE--ESSC-CTTTHHHHHHTTCCCEEES
T ss_pred HHHHhhCCCCEEEEcCccCCCCCCCcchhh----HHHHHHHHHhccCCCCEEE--ecCC-CHHHHHHHHHcCCCEEEEe
Confidence 44555689999998654332211 112 34455555532 2444433 3454 7888999999999999764
No 450
>3l23_A Sugar phosphate isomerase/epimerase; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.70A {Parabacteroides distasonis}
Probab=34.40 E-value=60 Score=28.67 Aligned_cols=76 Identities=12% Similarity=-0.006 Sum_probs=46.3
Q ss_pred HHHHHHHHHcCCCeeecchhchHHHHhhhcCCCCCHHHHHHHHHHHHHhCCCCeEEE-eeee-e-C-C------------
Q 018731 196 LRAVETLVHSGLDVFAHNIETVKRLQRIVRDPRAGYEQSLEVLKHAKLSKKGLITKS-SIML-G-L-G------------ 259 (351)
Q Consensus 196 ~e~l~~L~~aG~~~i~~~ies~~~~~~~~r~~~~~~~~~l~~i~~~~~~~~Gi~v~~-~~Iv-G-l-g------------ 259 (351)
++.++.++++|++.|-+....... .. ..+.+++.+ .+.+ .|+.+.+ ..-+ + . .
T Consensus 32 ~~~l~~~a~~G~~~VEl~~~~~~~----~~--~~~~~~~~~---~l~~--~GL~v~~~~~~~~~~~~~~p~~~~~~~~~~ 100 (303)
T 3l23_A 32 AANLRKVKDMGYSKLELAGYGKGA----IG--GVPMMDFKK---MAED--AGLKIISSHVNPVDTSISDPFKAMIFKYSK 100 (303)
T ss_dssp HHHHHHHHHTTCCEEEECCEETTE----ET--TEEHHHHHH---HHHH--TTCEEEEEECCCBCTTCSSTTTTBCCSCCT
T ss_pred HHHHHHHHHcCCCEEEeccccCcc----cC--CCCHHHHHH---HHHH--cCCeEEEEecccccccccCcccccccccch
Confidence 689999999999998764321100 11 224444444 4455 8998643 2211 1 0 0
Q ss_pred ----CCHHHHHHHHHHHHhCCCCEEee
Q 018731 260 ----ESDDDLKEAMADLRSIDVDILTL 282 (351)
Q Consensus 260 ----Et~e~~~~~l~~l~~lg~d~i~i 282 (351)
+..+.+.+.++.+.++|+..+.+
T Consensus 101 ~~~~~~~~~~~~~i~~A~~lG~~~v~~ 127 (303)
T 3l23_A 101 EVTPKIMEYWKATAADHAKLGCKYLIQ 127 (303)
T ss_dssp TTHHHHHHHHHHHHHHHHHTTCSEEEE
T ss_pred hhHHHHHHHHHHHHHHHHHcCCCEEEE
Confidence 12456788889999999998877
No 451
>3gka_A N-ethylmaleimide reductase; decode biostructures, ssgcid, niaid, targetdb bupsa00093A, structural genomics; HET: FMN; 2.30A {Burkholderia pseudomallei} SCOP: c.1.4.0
Probab=34.37 E-value=67 Score=29.67 Aligned_cols=66 Identities=9% Similarity=0.060 Sum_probs=41.0
Q ss_pred hhHHHHHHHHHhCCCcEEEEeccCCCCCCCCcHHHHHHHHHHHHHhCCCcEEEEeecCCCCCHHHHHHHHHcC-CCeeec
Q 018731 134 MEPENTAKAIASWGVDYIVLTSVDRDDIPDGGSGHFARTVKAMKKQKPDIMVECLTSDFRGDLRAVETLVHSG-LDVFAH 212 (351)
Q Consensus 134 eei~~~~~~~~~~G~~~I~ltgg~~~~l~~~~~~~~~~li~~ik~~~p~i~i~~~~~~~~~~~e~l~~L~~aG-~~~i~~ 212 (351)
++..+.++.+.+.|+..|.++++.. . . ++++.+++.. ++.|- ..+.. +.+.++.+.+.| +|.|.+
T Consensus 250 ~~~~~la~~l~~~Gvd~i~v~~~~~---~----~---~~~~~ik~~~-~iPvi--~~Ggi-t~e~a~~~l~~G~aD~V~i 315 (361)
T 3gka_A 250 ATFGHVARELGRRRIAFLFARESFG---G----D---AIGQQLKAAF-GGPFI--VNENF-TLDSAQAALDAGQADAVAW 315 (361)
T ss_dssp HHHHHHHHHHHHTTCSEEEEECCCS---T----T---CCHHHHHHHH-CSCEE--EESSC-CHHHHHHHHHTTSCSEEEE
T ss_pred HHHHHHHHHHHHcCCCEEEECCCCC---C----H---HHHHHHHHHc-CCCEE--EeCCC-CHHHHHHHHHcCCccEEEE
Confidence 4556777777888888888876641 1 0 2344555543 22332 23444 788888877777 888877
Q ss_pred c
Q 018731 213 N 213 (351)
Q Consensus 213 ~ 213 (351)
+
T Consensus 316 G 316 (361)
T 3gka_A 316 G 316 (361)
T ss_dssp S
T ss_pred C
Confidence 6
No 452
>2z1k_A (NEO)pullulanase; hydrolase, structural genomics, NPPSFA, national project on structural and functional analyses; HET: GLC; 2.30A {Thermus thermophilus}
Probab=34.29 E-value=63 Score=30.63 Aligned_cols=39 Identities=18% Similarity=0.152 Sum_probs=31.2
Q ss_pred CCHHHHHHHHHHHHHhCCCCeEEEeeeeeC-CCCHHHHHHHH
Q 018731 229 AGYEQSLEVLKHAKLSKKGLITKSSIMLGL-GESDDDLKEAM 269 (351)
Q Consensus 229 ~~~~~~l~~i~~~~~~~~Gi~v~~~~IvGl-gEt~e~~~~~l 269 (351)
.+.++..+.++.+++ .||+|-.++++.+ +..-.-+.+.+
T Consensus 94 Gt~~df~~lv~~~h~--~Gi~VilD~V~NH~~~~~~~f~~~~ 133 (475)
T 2z1k_A 94 GGNEALRHLLEVAHA--HGVRVILDGVFNHTGRGFFAFQHLM 133 (475)
T ss_dssp TCHHHHHHHHHHHHH--TTCEEEEEECCSBCCTTSHHHHHHH
T ss_pred CCHHHHHHHHHHHHH--CCCEEEEEEecccccCCCHHHHHHH
Confidence 478999999999999 9999999999988 65444444443
No 453
>3civ_A Endo-beta-1,4-mannanase; TIM barrel, hydrolase; 1.90A {Alicyclobacillus acidocaldarius}
Probab=34.13 E-value=2.1e+02 Score=25.92 Aligned_cols=58 Identities=9% Similarity=-0.014 Sum_probs=34.4
Q ss_pred HHHHHHHHcCCCeeecch----hchHH-HHhhhcCCCCCHHHHHHHHHHHHHhCCCCeEEEeeee
Q 018731 197 RAVETLVHSGLDVFAHNI----ETVKR-LQRIVRDPRAGYEQSLEVLKHAKLSKKGLITKSSIML 256 (351)
Q Consensus 197 e~l~~L~~aG~~~i~~~i----es~~~-~~~~~r~~~~~~~~~l~~i~~~~~~~~Gi~v~~~~Iv 256 (351)
+.++.|++.|++.|.+-+ .+.+. ......+...+.+..++.++.|++ .||.|.....+
T Consensus 57 ~~l~~lk~~g~N~VrL~v~~~~~~~~~~~~~~~~~~t~~~~~v~~~~~~Ak~--~GL~V~l~p~i 119 (343)
T 3civ_A 57 ASMRALAEQPFNWVTLAFAGLMEHPGDPAIAYGPPVTVSDDEIASMAELAHA--LGLKVCLKPTV 119 (343)
T ss_dssp HHHHHHHHSSCSEEEEEEEEEESSTTCCCCBCSTTTBCCHHHHHHHHHHHHH--TTCEEEEEEEE
T ss_pred HHHHHHHHcCCCEEEEEeeecCCCCCCCcccccCCCCCCHHHHHHHHHHHHH--CCCEEEEEEEe
Confidence 566677777777765421 11110 000000012378899999999999 99998775544
No 454
>3kru_A NADH:flavin oxidoreductase/NADH oxidase; homotetramer, dimer of dimers, TIM barrel, thermophilic, OLD enzyme; HET: FMN; 1.60A {Thermoanaerobacter pseudethanolicus AT} SCOP: c.1.4.0 PDB: 3krz_A*
Probab=34.10 E-value=1.8e+02 Score=26.48 Aligned_cols=86 Identities=16% Similarity=0.204 Sum_probs=48.6
Q ss_pred HHHHHHHHcCCCeeecchh-c--hHHHH-hhh--c-C-CCCCHHH----HHHHHHHHHHhC-CCCeEEEeeee-eC---C
Q 018731 197 RAVETLVHSGLDVFAHNIE-T--VKRLQ-RIV--R-D-PRAGYEQ----SLEVLKHAKLSK-KGLITKSSIML-GL---G 259 (351)
Q Consensus 197 e~l~~L~~aG~~~i~~~ie-s--~~~~~-~~~--r-~-~~~~~~~----~l~~i~~~~~~~-~Gi~v~~~~Iv-Gl---g 259 (351)
+.+++.+++|+|.|-++.- . ++++. ... | | -+.+.+. .++.++.+++.. +++.|..-+=. ++ |
T Consensus 147 ~AA~~a~~aGfDgVEih~ahGYLl~qFlsp~~N~R~D~yGGslenR~rf~~eiv~aVr~avg~d~pv~vRls~~~~~~~g 226 (343)
T 3kru_A 147 EAAKRANLAGYDVVEIHAAHGYLIHEFLSPLSNKRKDEYGNSIENRARFLIEVIDEVRKNWPENKPIFVRVSADDYMEGG 226 (343)
T ss_dssp HHHHHHHHHTCSEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHTHHHHHHHHHHHHTSCTTSCEEEEEECCCSSTTS
T ss_pred HHHhhccccCCceEEEecccchhHHHhhcccccccchhhccchHhHHHHHHHHHHHHHhcCCccCCeEEEeechhhhccC
Confidence 4566778899999976521 1 12221 111 1 0 1234443 245555555532 24443332211 22 6
Q ss_pred CCHHHHHHHHHHHHhCCCCEEeee
Q 018731 260 ESDDDLKEAMADLRSIDVDILTLG 283 (351)
Q Consensus 260 Et~e~~~~~l~~l~~lg~d~i~i~ 283 (351)
.+.++..+.++.+.+. +|.+.+.
T Consensus 227 ~~~~~~~~~a~~l~~~-vd~i~vs 249 (343)
T 3kru_A 227 INIDMMVEYINMIKDK-VDLIDVS 249 (343)
T ss_dssp CCHHHHHHHHHHHTTT-CSEEEEE
T ss_pred ccHHHHHHHHHHhhcc-ccEEecc
Confidence 7889999999999999 9999884
No 455
>4dye_A Isomerase; enolase family protein, EFI, enzym function initiative; 1.60A {Streptomyces coelicolor} PDB: 2oqh_A
Probab=33.97 E-value=1.7e+02 Score=27.18 Aligned_cols=71 Identities=15% Similarity=0.149 Sum_probs=45.9
Q ss_pred CchhHHHHHHHHHhC-CCcEEEEeccCCCCCCCCcHHHHHHHHHHHHHhCCCcEEEEeecCCCCCH----HHHHHHHHcC
Q 018731 132 DPMEPENTAKAIASW-GVDYIVLTSVDRDDIPDGGSGHFARTVKAMKKQKPDIMVECLTSDFRGDL----RAVETLVHSG 206 (351)
Q Consensus 132 ~~eei~~~~~~~~~~-G~~~I~ltgg~~~~l~~~~~~~~~~li~~ik~~~p~i~i~~~~~~~~~~~----e~l~~L~~aG 206 (351)
+++++.+.++.+.+. |++.+-+--|.. .+.=.+.++++++..|++.+.+=.+.. .+. ..++.|.+.|
T Consensus 168 ~~e~~~~~a~~~~~~~G~~~~K~KvG~~-------~~~d~~~v~avR~~~~~~~l~vDaN~~-w~~~~A~~~~~~l~~~~ 239 (398)
T 4dye_A 168 LPKAMAEHAVRVVEEGGFDAVKLKGTTD-------CAGDVAILRAVREALPGVNLRVDPNAA-WSVPDSVRAGIALEELD 239 (398)
T ss_dssp HHHHHHHHHHHHHHHHCCSEEEEECCSC-------HHHHHHHHHHHHHHCTTSEEEEECTTC-SCHHHHHHHHHHHGGGC
T ss_pred CHHHHHHHHHHHHHhcCCCEEEEecCCC-------HHHHHHHHHHHHHhCCCCeEEeeCCCC-CCHHHHHHHHHHHhhcC
Confidence 357888888888888 999998754421 245567888888877776654422333 343 3345566677
Q ss_pred CCee
Q 018731 207 LDVF 210 (351)
Q Consensus 207 ~~~i 210 (351)
+..|
T Consensus 240 i~~i 243 (398)
T 4dye_A 240 LEYL 243 (398)
T ss_dssp CSEE
T ss_pred CCEE
Confidence 7766
No 456
>3t7v_A Methylornithine synthase PYLB; TIM-barrel fold, mutase, [4Fe-4S]-cluster, SAM, lysine, transferase; HET: SAM MD0; 1.50A {Methanosarcina barkeri}
Probab=33.74 E-value=2.6e+02 Score=24.99 Aligned_cols=166 Identities=14% Similarity=0.077 Sum_probs=87.0
Q ss_pred HHHHHHhCCCcEEEEeccCCCC--C-----CCCcHHHHHHHHHHHHHhCCCcEEEEe-ecCCCCC----HHHHHHHHHcC
Q 018731 139 TAKAIASWGVDYIVLTSVDRDD--I-----PDGGSGHFARTVKAMKKQKPDIMVECL-TSDFRGD----LRAVETLVHSG 206 (351)
Q Consensus 139 ~~~~~~~~G~~~I~ltgg~~~~--l-----~~~~~~~~~~li~~ik~~~p~i~i~~~-~~~~~~~----~e~l~~L~~aG 206 (351)
.++.+.+.|+..+.+ |.+..+ + +....+.+.+.++.+++. ++.+.+. ..+...+ .+.++.+++.+
T Consensus 154 ~l~~L~~aG~~~i~i-~lEt~~~~~~~~i~~~~~~~~~l~~i~~a~~~--Gi~v~~~~i~Glget~e~~~~~l~~l~~l~ 230 (350)
T 3t7v_A 154 TLLKAREKGANFLAL-YQETYDTELYRKLRVGQSFDGRVNARRFAKQQ--GYCVEDGILTGVGNDIESTILSLRGMSTND 230 (350)
T ss_dssp HHHHHHHTTEEEEEC-CCBCSCHHHHHHHSTTCCHHHHHHHHHHHHHH--TCEEEEEEEESSSCCHHHHHHHHHHHHHTC
T ss_pred HHHHHHHcCCCEEEE-eeecCCHHHHHHhCCCCCHHHHHHHHHHHHHc--CCeEccceEeecCCCHHHHHHHHHHHHhCC
Confidence 455667788887765 333210 0 123467888888888887 4444321 1122122 36788899999
Q ss_pred CCeeecchhc---hHHHHhhhcCCCCCHHHHHHHHHHHHHhCCCCeEEEeeeeeCCCCHHHHHHHHHHHHhCCCCEEeee
Q 018731 207 LDVFAHNIET---VKRLQRIVRDPRAGYEQSLEVLKHAKLSKKGLITKSSIMLGLGESDDDLKEAMADLRSIDVDILTLG 283 (351)
Q Consensus 207 ~~~i~~~ies---~~~~~~~~r~~~~~~~~~l~~i~~~~~~~~Gi~v~~~~IvGlgEt~e~~~~~l~~l~~lg~d~i~i~ 283 (351)
++.+.+..=. ..++.+. +..+.++.++.+..++-..++..+.++... .=.+..+.....|++.+.-
T Consensus 231 ~~~v~~~~f~p~~gT~l~~~---~~~~~~e~l~~ia~~Rl~lp~~~I~a~~~~-------~g~~~~~~~l~~Gan~~~~- 299 (350)
T 3t7v_A 231 PDMVRVMTFLPQEGTPLEGF---RDKSNLSELKIISVLRLMFPKRLIPASLDL-------EGIDGMVLRLNAGANIVTS- 299 (350)
T ss_dssp CSEEEEEECCCCTTSTTTTC---CCCCCCCHHHHHHHHHHHSTTSBCEEEHHH-------HHHHHHHHHHHTTCCEEEE-
T ss_pred CCEEEecceeeCCCCcCccC---CCCChHHHHHHHHHHHHhCCCcCccccccc-------cChhHHHHHHhcCCceecC-
Confidence 9987654211 1123221 233555566666666655566554443221 1124556667889986554
Q ss_pred cccCC-CCCcccccCCC----CHHHHHHHHHHHHhcCccee
Q 018731 284 QYLQP-TPLHLTVKEYV----TPEKFDFWKAYGESIGFRYV 319 (351)
Q Consensus 284 ~~l~P-Tp~~~~~~~~v----~~~e~~~~~~~~~~~G~~~~ 319 (351)
.+.| +.......... ..-..+.+.+.++..||..+
T Consensus 300 -~~~~~~~~ag~~~~~~~~~~~~~~~~~~~~~i~~~G~~~~ 339 (350)
T 3t7v_A 300 -ILPPDSQLEGVANYDRDLEERDRDIKSVVRRLEIMGMKPA 339 (350)
T ss_dssp -ECCSSCCCCCSSCTTTTCSSCCCCHHHHHHHHHHHTCEEC
T ss_pred -CCCCCCCCCCCCCCcccchhccCCHHHHHHHHHHcCCccc
Confidence 2334 22111011100 00134566777888898644
No 457
>4ab4_A Xenobiotic reductase B; oxidoreductase, OLD yellow enzyme; HET: FMN TNL EDO; 1.50A {Pseudomonas putida KT2440}
Probab=33.68 E-value=71 Score=29.51 Aligned_cols=66 Identities=14% Similarity=0.101 Sum_probs=39.6
Q ss_pred hhHHHHHHHHHhCCCcEEEEeccCCCCCCCCcHHHHHHHHHHHHHhCCCcEEEEeecCCCCCHHHHHHHHHcC-CCeeec
Q 018731 134 MEPENTAKAIASWGVDYIVLTSVDRDDIPDGGSGHFARTVKAMKKQKPDIMVECLTSDFRGDLRAVETLVHSG-LDVFAH 212 (351)
Q Consensus 134 eei~~~~~~~~~~G~~~I~ltgg~~~~l~~~~~~~~~~li~~ik~~~p~i~i~~~~~~~~~~~e~l~~L~~aG-~~~i~~ 212 (351)
++..+.++.+.+.|+..|.++++.. . . ++++.+++.. ++.|- .++.. +.+.++.+.+.| +|.|.+
T Consensus 242 ~~~~~la~~l~~~Gvd~i~v~~~~~---~---~----~~~~~ik~~~-~iPvi--~~Ggi-t~e~a~~~l~~g~aD~V~i 307 (362)
T 4ab4_A 242 ETFTYVARELGKRGIAFICSREREA---D---D----SIGPLIKEAF-GGPYI--VNERF-DKASANAALASGKADAVAF 307 (362)
T ss_dssp HHHHHHHHHHHHTTCSEEEEECCCC---T---T----CCHHHHHHHH-CSCEE--EESSC-CHHHHHHHHHTTSCSEEEE
T ss_pred HHHHHHHHHHHHhCCCEEEECCCCC---C---H----HHHHHHHHHC-CCCEE--EeCCC-CHHHHHHHHHcCCccEEEE
Confidence 3456677777778888888776541 1 0 2344555543 22332 23344 777777777776 888877
Q ss_pred c
Q 018731 213 N 213 (351)
Q Consensus 213 ~ 213 (351)
+
T Consensus 308 G 308 (362)
T 4ab4_A 308 G 308 (362)
T ss_dssp S
T ss_pred C
Confidence 5
No 458
>2qul_A D-tagatose 3-epimerase; beta/alpha barrel, isomerase; 1.79A {Pseudomonas cichorii} PDB: 2ou4_A 2qum_A* 2qun_A*
Probab=33.67 E-value=2.2e+02 Score=24.18 Aligned_cols=76 Identities=13% Similarity=0.168 Sum_probs=47.9
Q ss_pred HHHHHHHHHcCCCeeecchhchHHHHhhhcCCCCCHHHHHHHHHHHHHhCCCCeEEEeeee----eCC-CC-------HH
Q 018731 196 LRAVETLVHSGLDVFAHNIETVKRLQRIVRDPRAGYEQSLEVLKHAKLSKKGLITKSSIML----GLG-ES-------DD 263 (351)
Q Consensus 196 ~e~l~~L~~aG~~~i~~~ies~~~~~~~~r~~~~~~~~~l~~i~~~~~~~~Gi~v~~~~Iv----Glg-Et-------~e 263 (351)
++.++.++++|++.|-+....... ....+.-+..+.+.+ .|+.+.+..-+ .++ .. .+
T Consensus 20 ~~~l~~~~~~G~~~vEl~~~~~~~---------~~~~~~~~~~~~l~~--~gl~~~~~~~~~~~~~l~~~d~~~r~~~~~ 88 (290)
T 2qul_A 20 PATAKRIAGLGFDLMEISLGEFHN---------LSDAKKRELKAVADD--LGLTVMCCIGLKSEYDFASPDKSVRDAGTE 88 (290)
T ss_dssp HHHHHHHHHTTCSEEEEESTTGGG---------SCHHHHHHHHHHHHH--HTCEEEEEEEECGGGCTTCSCHHHHHHHHH
T ss_pred HHHHHHHHHhCCCEEEEecCCccc---------cchhhHHHHHHHHHH--cCCceEEecCCCCCCCCCCCCHHHHHHHHH
Confidence 588999999999998765432111 011333344445566 89986653211 232 22 26
Q ss_pred HHHHHHHHHHhCCCCEEee
Q 018731 264 DLKEAMADLRSIDVDILTL 282 (351)
Q Consensus 264 ~~~~~l~~l~~lg~d~i~i 282 (351)
.+.+.++.+.++|+..+.+
T Consensus 89 ~~~~~i~~a~~lG~~~v~~ 107 (290)
T 2qul_A 89 YVKRLLDDCHLLGAPVFAG 107 (290)
T ss_dssp HHHHHHHHHHHHTCSEEEE
T ss_pred HHHHHHHHHHHcCCCEEEe
Confidence 6788888999999998765
No 459
>1hjs_A Beta-1,4-galactanase; 4-galactanases, family 53 glycoside hydrolase, thermostability, PH optimum, CLAN GH-A, thermophIle, alkalophIle; HET: NAG EPE; 1.87A {Thielavia heterothallica} SCOP: c.1.8.3 PDB: 1hju_A* 1hjq_A*
Probab=33.52 E-value=50 Score=30.04 Aligned_cols=53 Identities=17% Similarity=0.189 Sum_probs=39.9
Q ss_pred HHHHHHHHHcCCCeeecchhchHHHHhhhcCCCCCHHHHHHHHHHHHHhCCCCeEEEeeee
Q 018731 196 LRAVETLVHSGLDVFAHNIETVKRLQRIVRDPRAGYEQSLEVLKHAKLSKKGLITKSSIML 256 (351)
Q Consensus 196 ~e~l~~L~~aG~~~i~~~ies~~~~~~~~r~~~~~~~~~l~~i~~~~~~~~Gi~v~~~~Iv 256 (351)
.+.++.|+++|++.|-+.+- .++. +...+.+..+++++.+++ .|++|-.++-+
T Consensus 30 ~d~~~ilk~~G~N~VRi~~w-~~P~-----~g~~~~~~~~~~~~~A~~--~GlkV~ld~Hy 82 (332)
T 1hjs_A 30 QPLENILAANGVNTVRQRVW-VNPA-----DGNYNLDYNIAIAKRAKA--AGLGVYIDFHY 82 (332)
T ss_dssp CCHHHHHHHTTCCEEEEEEC-SSCT-----TCTTSHHHHHHHHHHHHH--TTCEEEEEECC
T ss_pred ccHHHHHHHCCCCEEEEeee-eCCC-----CCcCCHHHHHHHHHHHHH--CCCEEEEEecc
Confidence 46789999999999976541 1111 113488999999999999 99998888754
No 460
>1nu5_A Chloromuconate cycloisomerase; enzyme, dehalogenation; 1.95A {Pseudomonas SP} SCOP: c.1.11.2 d.54.1.1
Probab=33.33 E-value=2.7e+02 Score=25.15 Aligned_cols=148 Identities=17% Similarity=0.134 Sum_probs=79.7
Q ss_pred CchhHHHHHHHHHh-CCCcEEEEeccCCCCCCCCcHHHHHHHHHHHHHhC-CCcEEEEeecCCCCCH----HHHHHHHHc
Q 018731 132 DPMEPENTAKAIAS-WGVDYIVLTSVDRDDIPDGGSGHFARTVKAMKKQK-PDIMVECLTSDFRGDL----RAVETLVHS 205 (351)
Q Consensus 132 ~~eei~~~~~~~~~-~G~~~I~ltgg~~~~l~~~~~~~~~~li~~ik~~~-p~i~i~~~~~~~~~~~----e~l~~L~~a 205 (351)
++++..+.++.+.+ .|++.+-+-.|.++ .+.-.+.++++++.. +++.+.+-.+.. .+. +.++.|.+.
T Consensus 142 ~~e~~~~~a~~~~~~~Gf~~iKik~g~~~------~~~~~e~v~avr~a~g~~~~l~vDan~~-~~~~~a~~~~~~l~~~ 214 (370)
T 1nu5_A 142 DTARDIDSALEMIETRRHNRFKVKLGART------PAQDLEHIRSIVKAVGDRASVRVDVNQG-WDEQTASIWIPRLEEA 214 (370)
T ss_dssp CHHHHHHHHHHHHHTTSCSEEEEECSSSC------HHHHHHHHHHHHHHHGGGCEEEEECTTC-CCHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHhCCccEEEEecCCCC------hHHHHHHHHHHHHhcCCCCEEEEECCCC-CCHHHHHHHHHHHHhc
Confidence 46777777777777 99999887655421 345678888888754 355544322333 242 456667777
Q ss_pred CCCeeecchhchHHHHhhhcCCCCCHHHHHHHHHHHHHhCCCCeEEEeeeeeCCCCHHHHHHHHHHHHhCCCCEEeeecc
Q 018731 206 GLDVFAHNIETVKRLQRIVRDPRAGYEQSLEVLKHAKLSKKGLITKSSIMLGLGESDDDLKEAMADLRSIDVDILTLGQY 285 (351)
Q Consensus 206 G~~~i~~~ies~~~~~~~~r~~~~~~~~~l~~i~~~~~~~~Gi~v~~~~IvGlgEt~e~~~~~l~~l~~lg~d~i~i~~~ 285 (351)
|++.|- - + + +..++ +.++.+++. .++.+.+ +|+..+..+..+.+..-.+|.+.+.
T Consensus 215 ~i~~iE----q--P----~--~~~~~----~~~~~l~~~-~~ipIa~------dE~~~~~~~~~~~i~~~~~d~v~ik-- 269 (370)
T 1nu5_A 215 GVELVE----Q--P----V--PRANF----GALRRLTEQ-NGVAILA------DESLSSLSSAFELARDHAVDAFSLK-- 269 (370)
T ss_dssp TCCEEE----C--C----S--CTTCH----HHHHHHHHH-CSSEEEE------STTCCSHHHHHHHHHTTCCSEEEEC--
T ss_pred CcceEe----C--C----C--CcccH----HHHHHHHHh-CCCCEEe------CCCCCCHHHHHHHHHhCCCCEEEEc--
Confidence 888652 1 1 1 12233 233333331 3444322 3433333344444455567777762
Q ss_pred cCCCCCcccccCCCCHHHHHHHHHHHHhcCcceec
Q 018731 286 LQPTPLHLTVKEYVTPEKFDFWKAYGESIGFRYVA 320 (351)
Q Consensus 286 l~PTp~~~~~~~~v~~~e~~~~~~~~~~~G~~~~~ 320 (351)
++.. =...+..++.++++..|...+.
T Consensus 270 --~~~~-------GGit~~~~i~~~A~~~g~~~~~ 295 (370)
T 1nu5_A 270 --LCNM-------GGIANTLKVAAVAEAAGISSYG 295 (370)
T ss_dssp --HHHH-------TSHHHHHHHHHHHHHHTCEEEE
T ss_pred --hhhc-------CCHHHHHHHHHHHHHcCCcEEe
Confidence 2110 1234566677777777776543
No 461
>1g94_A Alpha-amylase; beta-alpha-8-barrel, 3 domain structure, hydrolase; HET: DAF GLC; 1.74A {Pseudoalteromonas haloplanktis} SCOP: b.71.1.1 c.1.8.1 PDB: 1g9h_A* 1l0p_A 1aqm_A* 1aqh_A* 1b0i_A 1jd7_A 1jd9_A 1kxh_A*
Probab=33.27 E-value=50 Score=31.23 Aligned_cols=63 Identities=10% Similarity=0.121 Sum_probs=0.0
Q ss_pred HHHHHHHHHcCCCeeecc--hhchH------HH----HhhhcCCCCCHHHHHHHHHHHHHhCCCCeEEEeeeeeC-CCC
Q 018731 196 LRAVETLVHSGLDVFAHN--IETVK------RL----QRIVRDPRAGYEQSLEVLKHAKLSKKGLITKSSIMLGL-GES 261 (351)
Q Consensus 196 ~e~l~~L~~aG~~~i~~~--ies~~------~~----~~~~r~~~~~~~~~l~~i~~~~~~~~Gi~v~~~~IvGl-gEt 261 (351)
++.++.|++.|++.|.+. .++.. .. ++.-. .-.+.++..+.++.+++ .||+|-.++++.+ +..
T Consensus 18 ~~lldyL~~LGv~~I~l~Pi~~~~~~~~~~~gY~~~~y~idp-~~Gt~~dfk~Lv~~aH~--~Gi~VilD~V~NH~~~~ 93 (448)
T 1g94_A 18 QECEQYLGPKGYAAVQVSPPNEHITGSQWWTRYQPVSYELQS-RGGNRAQFIDMVNRCSA--AGVDIYVDTLINHMAAG 93 (448)
T ss_dssp HHHHHTHHHHTCCEEEECCCSCBBCSSSGGGGGSBSCSCSCB-TTBCHHHHHHHHHHHHH--TTCEEEEEEECSEECSS
T ss_pred HHHHHHHHHcCCCEEEECCccccCCCCCCcccccccccccCC-CCCCHHHHHHHHHHHHH--CCCEEEEEEeeccccCC
No 462
>3stp_A Galactonate dehydratase, putative; PSI biology, structural genomics, NEW YORK structural genomi research consortium; 1.88A {Labrenzia aggregata iam 12614} PDB: 3sqs_A 3ssz_A
Probab=33.06 E-value=89 Score=29.31 Aligned_cols=76 Identities=14% Similarity=-0.039 Sum_probs=47.9
Q ss_pred CchhHHHHHHHHHhCCCcEEEEeccCCCCCCCC--cHHHHHHHHHHHHHhC-CCcEEEEeecCCCCCH----HHHHHHHH
Q 018731 132 DPMEPENTAKAIASWGVDYIVLTSVDRDDIPDG--GSGHFARTVKAMKKQK-PDIMVECLTSDFRGDL----RAVETLVH 204 (351)
Q Consensus 132 ~~eei~~~~~~~~~~G~~~I~ltgg~~~~l~~~--~~~~~~~li~~ik~~~-p~i~i~~~~~~~~~~~----e~l~~L~~ 204 (351)
++++..+.++.+.+.|++.+-+-.|..+ . ++ ..+.-.+.++++++.. |++.+.+=.+.. .+. +.++.|.+
T Consensus 179 ~~e~~~~~a~~~~~~Gf~~iKik~g~gp-~-dg~~~~~~die~v~avReavG~d~~L~vDaN~~-~~~~~Ai~~~~~Le~ 255 (412)
T 3stp_A 179 SIEAMQKEAEEAMKGGYKAFKSRFGYGP-K-DGMPGMRENLKRVEAVREVIGYDNDLMLECYMG-WNLDYAKRMLPKLAP 255 (412)
T ss_dssp CHHHHHHHHHHHHTTTCSEEEEECCCCG-G-GHHHHHHHHHHHHHHHHHHHCSSSEEEEECTTC-SCHHHHHHHHHHHGG
T ss_pred CHHHHHHHHHHHHHcCCCEEEEecccCc-c-cccchHHHHHHHHHHHHHHcCCCCeEEEECCCC-CCHHHHHHHHHHHHh
Confidence 5788888888888899999877533221 1 11 1245677888888765 566554422333 243 34566777
Q ss_pred cCCCee
Q 018731 205 SGLDVF 210 (351)
Q Consensus 205 aG~~~i 210 (351)
.|++.|
T Consensus 256 ~~i~~i 261 (412)
T 3stp_A 256 YEPRWL 261 (412)
T ss_dssp GCCSEE
T ss_pred cCCCEE
Confidence 788776
No 463
>3mz2_A Glycerophosphoryl diester phosphodiesterase; structural genomics, joint center for structural genomics; HET: MSE PE4; 1.55A {Parabacteroides distasonis}
Probab=32.88 E-value=1.9e+02 Score=25.59 Aligned_cols=46 Identities=20% Similarity=0.171 Sum_probs=30.0
Q ss_pred HHHHHHHHHhCCCCeEEEeeeeeCC--CCHHHHHHHHHHHHhCCCCEEee
Q 018731 235 LEVLKHAKLSKKGLITKSSIMLGLG--ESDDDLKEAMADLRSIDVDILTL 282 (351)
Q Consensus 235 l~~i~~~~~~~~Gi~v~~~~IvGlg--Et~e~~~~~l~~l~~lg~d~i~i 282 (351)
-+.++.+++ .|+.|....+-... ....+-.+.+..+.++|+|.|.-
T Consensus 218 ~~~V~~ah~--~G~~V~vWTv~t~d~~~~~~~~~~~~~~L~~~GVDgIiT 265 (292)
T 3mz2_A 218 REVIDMLHE--RGVMCMISTAPSDDKLSTPESRAEAYRMIIRQGVDIIES 265 (292)
T ss_dssp HHHHHHHHH--TTBCEEEECTTTGGGSSSHHHHHHHHHHHHHTTCCEEEE
T ss_pred HHHHHHHHH--CCCEEEEEeCCCcchhhhccccHHHHHHHHHcCCCEEEe
Confidence 466788888 89987654332221 12334456788888999998765
No 464
>3fa4_A 2,3-dimethylmalate lyase; alpha/beta barrel, helix swapping; 2.18A {Aspergillus niger} PDB: 3fa3_A
Probab=32.85 E-value=2.7e+02 Score=24.91 Aligned_cols=140 Identities=13% Similarity=0.131 Sum_probs=72.2
Q ss_pred HHHHHhCCCcEEEEec--------cCCCCCCCCcHHHHHHHHHHHHHhCCCcEEEEeecCCCCCH----HHHHHHHHcCC
Q 018731 140 AKAIASWGVDYIVLTS--------VDRDDIPDGGSGHFARTVKAMKKQKPDIMVECLTSDFRGDL----RAVETLVHSGL 207 (351)
Q Consensus 140 ~~~~~~~G~~~I~ltg--------g~~~~l~~~~~~~~~~li~~ik~~~p~i~i~~~~~~~~~~~----e~l~~L~~aG~ 207 (351)
++.+.+.|++-++++| |.++ ...-.++.+..-++.|.+..+++.|-+=-+.+..+. +.++.+.++|+
T Consensus 31 A~l~e~aGf~ai~vsG~~~a~~~~G~pD-~~~vt~~em~~~~~~I~~~~~~~PviaD~d~Gyg~~~~v~~tv~~l~~aGa 109 (302)
T 3fa4_A 31 ARVALSAGFDALYMTGAGTAASVHGQAD-LGICTLNDMRANAEMISNISPSTPVIADADTGYGGPIMVARTTEQYSRSGV 109 (302)
T ss_dssp HHHHHTTTCSCEEECHHHHHHHHHSCCS-SSCCCHHHHHHHHHHHHTTSTTSCEEEECTTTTSSHHHHHHHHHHHHHTTC
T ss_pred HHHHHHcCCCEEEeCcHHHHHHHcCCCC-CCcCCHHHHHHHHHHHHhhccCCCEEEECCCCCCCHHHHHHHHHHHHHcCC
Confidence 3345567999888875 3332 211225666666777766433444433123222343 56778888999
Q ss_pred CeeecchhchHHHHhhhc-CCCCCHHHHHHHHHHHHHhC----CCCeE--EEeeeeeCCCCHHHHHHHHHHHHhCCCCEE
Q 018731 208 DVFAHNIETVKRLQRIVR-DPRAGYEQSLEVLKHAKLSK----KGLIT--KSSIMLGLGESDDDLKEAMADLRSIDVDIL 280 (351)
Q Consensus 208 ~~i~~~ies~~~~~~~~r-~~~~~~~~~l~~i~~~~~~~----~Gi~v--~~~~IvGlgEt~e~~~~~l~~l~~lg~d~i 280 (351)
..|.+-=+......-... ++-.+.++..+.|+.+++.. +++-+ .++... .+..++..+-++...+.|.|.+
T Consensus 110 agv~iEDq~~~Krcgh~~gk~l~~~~e~~~rI~Aa~~A~~~~~~d~~I~ARTDa~~--~~gldeAi~Ra~ay~eAGAD~i 187 (302)
T 3fa4_A 110 AAFHIEDQVQTKRCGHLAGKILVDTDTYVTRIRAAVQARQRIGSDIVVIARTDSLQ--THGYEESVARLRAARDAGADVG 187 (302)
T ss_dssp CEEEECSBCCC-------CCCBCCHHHHHHHHHHHHHHHHHHTCCCEEEEEECCHH--HHCHHHHHHHHHHHHTTTCSEE
T ss_pred cEEEECCCCCCcccCCCCCCeecCHHHHHHHHHHHHHHHHhcCCCEEEEEEecccc--cCCHHHHHHHHHHHHHcCCCEE
Confidence 988763222222110011 12246777777777666531 34433 233322 2234445555555567889987
Q ss_pred ee
Q 018731 281 TL 282 (351)
Q Consensus 281 ~i 282 (351)
.+
T Consensus 188 fi 189 (302)
T 3fa4_A 188 FL 189 (302)
T ss_dssp EE
T ss_pred ee
Confidence 76
No 465
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=32.81 E-value=1e+02 Score=30.74 Aligned_cols=79 Identities=19% Similarity=0.223 Sum_probs=51.6
Q ss_pred CchhHHHHHHHHHhCCCcEEEEeccCCC-CCC---C-CcHHHHHHHHHHHHHhCCCcEEEEeecCCCCCHHHHHHHHHcC
Q 018731 132 DPMEPENTAKAIASWGVDYIVLTSVDRD-DIP---D-GGSGHFARTVKAMKKQKPDIMVECLTSDFRGDLRAVETLVHSG 206 (351)
Q Consensus 132 ~~eei~~~~~~~~~~G~~~I~ltgg~~~-~l~---~-~~~~~~~~li~~ik~~~p~i~i~~~~~~~~~~~e~l~~L~~aG 206 (351)
+.++..+.++.+.+.|+..+.++++... ..+ . .+...+.+.++.+++.. ++.|- ..+...+.+.++.+.+.|
T Consensus 226 ~~~~~~~~a~~l~~~g~d~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~-~iPvi--~~Ggi~~~~~a~~~l~~g 302 (671)
T 1ps9_A 226 TFAETVELAQAIEAAGATIINTGIGWHEARIPTIATPVPRGAFSWVTRKLKGHV-SLPLV--TTNRINDPQVADDILSRG 302 (671)
T ss_dssp CHHHHHHHHHHHHHHTCSEEEEEECBTTCSSCSSSTTSCTTTTHHHHHHHTTSC-SSCEE--ECSSCCSHHHHHHHHHTT
T ss_pred CHHHHHHHHHHHHhcCCCEEEcCCCccccccccccccCCcchHHHHHHHHHHhc-CceEE--EeCCCCCHHHHHHHHHcC
Confidence 4567778888888899999988755321 111 0 01123456777888764 44443 345545888888888887
Q ss_pred -CCeeecc
Q 018731 207 -LDVFAHN 213 (351)
Q Consensus 207 -~~~i~~~ 213 (351)
+|.|.++
T Consensus 303 ~aD~V~~g 310 (671)
T 1ps9_A 303 DADMVSMA 310 (671)
T ss_dssp SCSEEEES
T ss_pred CCCEEEeC
Confidence 9999875
No 466
>1kbi_A Cytochrome B2, L-LCR; flavocytochrome B2, electron transfer, oxidoreductase; HET: HEM FMN; 2.30A {Saccharomyces cerevisiae} SCOP: c.1.4.1 d.120.1.1 PDB: 1fcb_A* 1lco_A* 1ldc_A* 1sze_A* 2oz0_A* 1szf_A* 1szg_A* 1ltd_A* 1kbj_A* 1qcw_A* 3ks0_A*
Probab=32.73 E-value=1.5e+02 Score=28.76 Aligned_cols=74 Identities=15% Similarity=0.102 Sum_probs=41.9
Q ss_pred HHHHHHHhCCCcEEEEeccCCCCCC--CCcHHHHHHHHHHHHHh--CCCcEEEEeecCCCCCHHHHHHHHHcCCCeeecc
Q 018731 138 NTAKAIASWGVDYIVLTSVDRDDIP--DGGSGHFARTVKAMKKQ--KPDIMVECLTSDFRGDLRAVETLVHSGLDVFAHN 213 (351)
Q Consensus 138 ~~~~~~~~~G~~~I~ltgg~~~~l~--~~~~~~~~~li~~ik~~--~p~i~i~~~~~~~~~~~e~l~~L~~aG~~~i~~~ 213 (351)
+.++.+.+.|++.|.+++.....+. ...++.+.++.+.+++. ..++.| ...+++.+.+.+.....+|.+.|.++
T Consensus 355 e~A~~a~~aGad~I~vs~hgG~~~d~~~~~~~~l~~v~~~v~~~~~~~~ipV--ia~GGI~~g~Dv~kaLalGAdaV~iG 432 (511)
T 1kbi_A 355 EDVIKAAEIGVSGVVLSNHGGRQLDFSRAPIEVLAETMPILEQRNLKDKLEV--FVDGGVRRGTDVLKALCLGAKGVGLG 432 (511)
T ss_dssp HHHHHHHHTTCSEEEECCTTTTSSTTCCCHHHHHHHHHHHHHTTTCBTTBEE--EEESSCCSHHHHHHHHHHTCSEEEEC
T ss_pred HHHHHHHHcCCCEEEEcCCCCccCCCCCchHHHHHHHHHHHHhhccCCCcEE--EEECCCCCHHHHHHHHHcCCCEEEEC
Confidence 4466677899999999643222221 11233444555555432 123444 34556557655555555999999886
No 467
>2r6o_A Putative diguanylate cyclase/phosphodiesterase (G domains); ggdef and EAL domains, structural genomics, PSI-2; 1.80A {Thiobacillus denitrificans} PDB: 3ii8_A* 3n3t_A*
Probab=32.69 E-value=1.4e+02 Score=26.30 Aligned_cols=40 Identities=23% Similarity=0.149 Sum_probs=24.9
Q ss_pred HHHHH-HHHHHHhCCCCeEEEeeeeeCCCCHHHHHHHHHHHHhCCCCEEee
Q 018731 233 QSLEV-LKHAKLSKKGLITKSSIMLGLGESDDDLKEAMADLRSIDVDILTL 282 (351)
Q Consensus 233 ~~l~~-i~~~~~~~~Gi~v~~~~IvGlgEt~e~~~~~l~~l~~lg~d~i~i 282 (351)
..++. +..+++ .|+.|-+- | -||.+++ ++++++|++.+.=
T Consensus 220 ~iv~~ii~la~~--lg~~vvAE---G-VEt~~q~----~~l~~lG~d~~QG 260 (294)
T 2r6o_A 220 QIVTTILALARG--LGMEVVAE---G-IETAQQY----AFLRDRGCEFGQG 260 (294)
T ss_dssp HHHHHHHHHHHH--TTCEEEEC---C-CCSHHHH----HHHHHTTCCEECS
T ss_pred HHHHHHHHHHHH--CCCEEEEe---c-CCcHHHH----HHHHHcCCCEEEc
Confidence 33443 455667 78864322 2 3676664 6678999998765
No 468
>1q7z_A 5-methyltetrahydrofolate S-homocysteine methyltransferase; methionine, cobalamin, vitamin B12; 1.70A {Thermotoga maritima} SCOP: c.1.21.2 c.1.26.1 PDB: 1q7q_A 1q7m_A 1q85_A 1q8a_A 1q8j_A* 3bof_A 3bol_A
Probab=32.66 E-value=1.7e+02 Score=28.67 Aligned_cols=45 Identities=9% Similarity=0.129 Sum_probs=26.3
Q ss_pred CCCHHHHHHHHHHHHHhCCCCeEEEeeeeeC--CCCHHHHHHHHHHHHhCCCCEEee
Q 018731 228 RAGYEQSLEVLKHAKLSKKGLITKSSIMLGL--GESDDDLKEAMADLRSIDVDILTL 282 (351)
Q Consensus 228 ~~~~~~~l~~i~~~~~~~~Gi~v~~~~IvGl--gEt~e~~~~~l~~l~~lg~d~i~i 282 (351)
+.+.++.+..++. .|.. .+|+ +-..+++...++.+.+.--..+.+
T Consensus 185 G~~~~~~~~~l~~-----~~~~-----avG~NC~~gp~~~~~~l~~l~~~~~~p~~v 231 (566)
T 1q7z_A 185 GTDPANFAITFDE-----LDID-----ALGINCSLGPEEILPIFQELSQYTDKFLVV 231 (566)
T ss_dssp SCCHHHHHHHHHT-----SSCS-----EEEEESSSCHHHHHHHHHHHHHTCCSEEEE
T ss_pred CCcHHHHHHHhhc-----cCCC-----EEEEeCCCCHHHHHHHHHHHHhcCCCEEEE
Confidence 5577777665543 3432 3556 345788888888887653233444
No 469
>3pm6_A Putative fructose-bisphosphate aldolase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.20A {Coccidioides immitis}
Probab=32.59 E-value=2.8e+02 Score=24.94 Aligned_cols=122 Identities=13% Similarity=0.115 Sum_probs=69.5
Q ss_pred CCcEEEEeccCCCCCCCCcHHHHHHHHHHHHHhCCCcEEEEee--c--------------CCCCCHHHHHHHHHcCCCee
Q 018731 147 GVDYIVLTSVDRDDIPDGGSGHFARTVKAMKKQKPDIMVECLT--S--------------DFRGDLRAVETLVHSGLDVF 210 (351)
Q Consensus 147 G~~~I~ltgg~~~~l~~~~~~~~~~li~~ik~~~p~i~i~~~~--~--------------~~~~~~e~l~~L~~aG~~~i 210 (351)
|+..|.+-|-.-+ + +.+.....++++..+.. ++.+++-- . ....+++.+..+.+.|+|.+
T Consensus 113 GFtSVMiDgS~~p-~-eENi~~Tk~vv~~ah~~--gvsVEaElG~igG~Edgv~~~~~~~~~yT~Peea~~Fv~TgvD~L 188 (306)
T 3pm6_A 113 GFDSIMVDMSHFS-K-EENLRLTRELVAYCNAR--GIATEAEPGRIEGGEDGVQDTVDLEGVLTTPEESEEFVATGINWL 188 (306)
T ss_dssp CCSEEEECCTTSC-H-HHHHHHHHHHHHHHHTT--TCEEEECSSBCCCCBTTBCCCTTCCCBCCCHHHHHHHHTTTCSEE
T ss_pred CCCEEEEeCCCCC-H-HHHHHHHHHHHHHHHHc--CCeEEEEeeeeccccCCccccccccccCCCHHHHHHHHHcCCCEE
Confidence 9999998654321 2 12344555666666654 66666310 0 12346788888889999998
Q ss_pred ecchhchHHHHhhhcCCCCCHHHHHHHHHHHHHhCCCCeEEEeeeeeC-CCCHHHHHHHHHHHHhCCCCEEeee
Q 018731 211 AHNIETVKRLQRIVRDPRAGYEQSLEVLKHAKLSKKGLITKSSIMLGL-GESDDDLKEAMADLRSIDVDILTLG 283 (351)
Q Consensus 211 ~~~ies~~~~~~~~r~~~~~~~~~l~~i~~~~~~~~Gi~v~~~~IvGl-gEt~e~~~~~l~~l~~lg~d~i~i~ 283 (351)
.+++=|..-.|+-- .++-++ ++++.|+.... .++.+ ++=|= |-++|++.+.+ ++|+-.+++.
T Consensus 189 AvaiGt~HG~Yk~~-~p~Ld~-~~L~~I~~~v~--~~vpL---VlHGgSG~p~e~i~~ai----~~GV~KiNi~ 251 (306)
T 3pm6_A 189 APAFGNVHGNYGPR-GVQLDY-ERLQRINEAVG--ERVGL---VLHGADPFTKEIFEKCI----ERGVAKVNVN 251 (306)
T ss_dssp CCCSSCCSSCCCTT-CCCCCH-HHHHHHHHHHT--TTSEE---EECSCTTCCHHHHHHHH----HTTEEEEEES
T ss_pred EEEcCccccCcCCC-CCccCH-HHHHHHHHHhC--CCCCE---EeeCCCCCCHHHHHHHH----HcCCeEEEeC
Confidence 87665543333211 134455 33444444332 34542 22343 67777766654 6898888885
No 470
>2q02_A Putative cytoplasmic protein; structural genomics, joint CEN structural genomics, JCSG, protein structure initiative; 2.40A {Salmonella typhimurium LT2} SCOP: c.1.15.4
Probab=32.50 E-value=2.2e+02 Score=23.87 Aligned_cols=71 Identities=8% Similarity=0.049 Sum_probs=35.2
Q ss_pred HHHHHHHHhCCCcEEEEeccCCC--CCCCCcHHHHHHHHHHHHHhCCCcEEEEeec--CCC-CC-------HHHHHHHHH
Q 018731 137 ENTAKAIASWGVDYIVLTSVDRD--DIPDGGSGHFARTVKAMKKQKPDIMVECLTS--DFR-GD-------LRAVETLVH 204 (351)
Q Consensus 137 ~~~~~~~~~~G~~~I~ltgg~~~--~l~~~~~~~~~~li~~ik~~~p~i~i~~~~~--~~~-~~-------~e~l~~L~~ 204 (351)
.+.++.+.+.|++.|-+.+..+. .... ..+.++-+.+++. ++.+..... .+. .+ .+.++..++
T Consensus 22 ~~~l~~~~~~G~~~vEl~~~~~~~~~~~~---~~~~~~~~~~~~~--gl~~~~~~~~~~~~~~~~~~~~~~~~~i~~a~~ 96 (272)
T 2q02_A 22 EAFFRLVKRLEFNKVELRNDMPSGSVTDD---LNYNQVRNLAEKY--GLEIVTINAVYPFNQLTEEVVKKTEGLLRDAQG 96 (272)
T ss_dssp HHHHHHHHHTTCCEEEEETTSTTSSTTTT---CCHHHHHHHHHHT--TCEEEEEEEETTTTSCCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCCEEEeeccccccccccc---cCHHHHHHHHHHc--CCeEEechhhhccCCcHHHHHHHHHHHHHHHHH
Confidence 34455566778888877643221 1111 2344444455554 555533221 111 12 245566666
Q ss_pred cCCCeeec
Q 018731 205 SGLDVFAH 212 (351)
Q Consensus 205 aG~~~i~~ 212 (351)
.|+..|.+
T Consensus 97 lG~~~v~~ 104 (272)
T 2q02_A 97 VGARALVL 104 (272)
T ss_dssp HTCSEEEE
T ss_pred hCCCEEEE
Confidence 78777753
No 471
>3eol_A Isocitrate lyase; seattle structural center for infectious disease, ssgcid; 2.00A {Brucella melitensis} PDB: 3oq8_A 3e5b_A 3p0x_A*
Probab=32.45 E-value=2.6e+02 Score=26.45 Aligned_cols=77 Identities=18% Similarity=0.100 Sum_probs=50.5
Q ss_pred chhHHHHHHHHHhCCCcEEEEeccCCCCCCCCcHHHHHHHHHHHHHhCCCcEEEE-eecCCC----CCHH----HHHHHH
Q 018731 133 PMEPENTAKAIASWGVDYIVLTSVDRDDIPDGGSGHFARTVKAMKKQKPDIMVEC-LTSDFR----GDLR----AVETLV 203 (351)
Q Consensus 133 ~eei~~~~~~~~~~G~~~I~ltgg~~~~l~~~~~~~~~~li~~ik~~~p~i~i~~-~~~~~~----~~~e----~l~~L~ 203 (351)
.++.++-+.++.. |.+-|++-++.+ + .+.+.++.+.++...|.-.+.. .+|.+. ++++ ..+.|.
T Consensus 265 ld~AI~Ra~AY~~-GAD~If~e~~~~----~--~eei~~f~~~v~~~~P~~~L~~~~sPsfnw~~~~~~~~~~~f~~eLa 337 (433)
T 3eol_A 265 IEPCIARAIAYAP-YCDLIWMETSKP----D--LAQARRFAEAVHKAHPGKLLAYNCSPSFNWKKNLDDATIAKFQRELG 337 (433)
T ss_dssp HHHHHHHHHHHGG-GCSEEEECCSSC----C--HHHHHHHHHHHHHHSTTCCEEEECCSSSCHHHHSCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHh-cCCEEEEeCCCC----C--HHHHHHHHHHhcccCCCcccccCCCCCCcccccCChhHHhHHHHHHH
Confidence 4566666667777 999999844332 1 5789999999987777533322 244442 1322 246799
Q ss_pred HcCCCeeecchhc
Q 018731 204 HSGLDVFAHNIET 216 (351)
Q Consensus 204 ~aG~~~i~~~ies 216 (351)
++|+.++.+++-.
T Consensus 338 ~lGv~~v~~~~a~ 350 (433)
T 3eol_A 338 AMGYKFQFITLAG 350 (433)
T ss_dssp HHTEEEEEETTHH
T ss_pred HcCCeEEEeCcHH
Confidence 9999999876544
No 472
>2y8u_A Chitin deacetylase; hydrolase; 1.99A {Emericella nidulans}
Probab=32.39 E-value=2.1e+02 Score=24.11 Aligned_cols=133 Identities=10% Similarity=0.140 Sum_probs=70.1
Q ss_pred HHHHHHHhCCCcEEEEeccCCCCCCCCcHH----HHHHHHHHHHHhCCCcEEEEe-ecCCCCCHHHHHHHHHcCCCeeec
Q 018731 138 NTAKAIASWGVDYIVLTSVDRDDIPDGGSG----HFARTVKAMKKQKPDIMVECL-TSDFRGDLRAVETLVHSGLDVFAH 212 (351)
Q Consensus 138 ~~~~~~~~~G~~~I~ltgg~~~~l~~~~~~----~~~~li~~ik~~~p~i~i~~~-~~~~~~~~e~l~~L~~aG~~~i~~ 212 (351)
+.++++.+.| .+|-.=+-....+.....+ .+.+.-+.|.+.. +.....+ .|.+..++..++.+++.|...+.-
T Consensus 75 ~~~~~~~~~G-heIg~Ht~~H~~l~~ls~~~~~~ei~~~~~~l~~~~-G~~~~~fr~P~G~~~~~~~~~l~~~G~~~~~w 152 (230)
T 2y8u_A 75 GLLQRMRDEG-HQVGAHTYDHVSLPSLGYDGIASQMTRLEEVIRPAL-GVAPAYMRPPYLETNELVLQVMRDLDYRVISA 152 (230)
T ss_dssp HHHHHHHHTT-CEEEECCSSCCCGGGSCHHHHHHHHHHHHHHHHHHH-SSCBSEECCGGGCCCHHHHHHHHHTTCEEECC
T ss_pred HHHHHHHHCC-CEEEecccCCCCcccCCHHHHHHHHHHHHHHHHHHh-CCCCcEEECCCCCCCHHHHHHHHHcCCEEEEe
Confidence 3455666677 3444323222223221122 3333334444432 2222222 355556889999999999988877
Q ss_pred chhchHHHHhhhcCCCCCHHHH----HHHHH-HHHHhCCCCeEEEeeeeeC-C--CCHHH-HHHHHHHHHhCCCCEEeee
Q 018731 213 NIETVKRLQRIVRDPRAGYEQS----LEVLK-HAKLSKKGLITKSSIMLGL-G--ESDDD-LKEAMADLRSIDVDILTLG 283 (351)
Q Consensus 213 ~ies~~~~~~~~r~~~~~~~~~----l~~i~-~~~~~~~Gi~v~~~~IvGl-g--Et~e~-~~~~l~~l~~lg~d~i~i~ 283 (351)
++++.|-.. + +.+++ ++.+. .... +|. +|+.+ + .|.++ +...+..+++.|...+++.
T Consensus 153 ~~d~~Dw~~-----~--~~~~ii~~~~~~~~~~~~~--~g~-----IiL~Hd~~~~t~~~~L~~ii~~l~~~Gy~fvtl~ 218 (230)
T 2y8u_A 153 SVDTKDYEN-----Q--DADAIINTSFQLFLDQLDA--GGN-----IVLAHDIHYWTVASLAERMLQEVNARGLIATTVG 218 (230)
T ss_dssp SEECCGGGC-----C--STTHHHHTHHHHHHHHHHT--TCC-----EEEECTTSHHHHHTHHHHHHHHHHHTTCEEECHH
T ss_pred cCCCCccCC-----C--CHHHHHHHHHHHHHhccCC--CCE-----EEEEECCCcchHHHHHHHHHHHHHHCCCEEEEhH
Confidence 777654321 1 11121 22221 2222 453 44444 2 24443 6778999999999998886
Q ss_pred ccc
Q 018731 284 QYL 286 (351)
Q Consensus 284 ~~l 286 (351)
..+
T Consensus 219 ell 221 (230)
T 2y8u_A 219 DCL 221 (230)
T ss_dssp HHT
T ss_pred Hhh
Confidence 554
No 473
>2nli_A Lactate oxidase; flavoenzyme, FMN, D-lactate, oxidoreducta; HET: FMN; 1.59A {Aerococcus viridans} PDB: 2zfa_A* 2du2_A* 2e77_A* 2j6x_A*
Probab=32.30 E-value=99 Score=28.53 Aligned_cols=72 Identities=17% Similarity=0.139 Sum_probs=41.6
Q ss_pred HHHHHHHhCCCcEEEEeccCCCCCCCCcHHHHHHHHHHHHHhCC-CcEEEEeecCCCCCHHHHHHHHHcCCCeeecc
Q 018731 138 NTAKAIASWGVDYIVLTSVDRDDIPDGGSGHFARTVKAMKKQKP-DIMVECLTSDFRGDLRAVETLVHSGLDVFAHN 213 (351)
Q Consensus 138 ~~~~~~~~~G~~~I~ltgg~~~~l~~~~~~~~~~li~~ik~~~p-~i~i~~~~~~~~~~~e~l~~L~~aG~~~i~~~ 213 (351)
+.++.+.+.|++.|.+++.....+. .+... .+++..+++..+ ++.| ...+++.+.+.+.....+|.+.+.++
T Consensus 241 e~a~~a~~~Gad~I~vs~~ggr~~~-~g~~~-~~~l~~v~~~v~~~ipV--ia~GGI~~g~D~~kalalGAd~V~iG 313 (368)
T 2nli_A 241 EDADMAIKRGASGIWVSNHGARQLY-EAPGS-FDTLPAIAERVNKRVPI--VFDSGVRRGEHVAKALASGADVVALG 313 (368)
T ss_dssp HHHHHHHHTTCSEEEECCGGGTSCS-SCCCH-HHHHHHHHHHHTTSSCE--EECSSCCSHHHHHHHHHTTCSEEEEC
T ss_pred HHHHHHHHcCCCEEEEcCCCcCCCC-CCCCh-HHHHHHHHHHhCCCCeE--EEECCCCCHHHHHHHHHcCCCEEEEC
Confidence 4556677899999999542211121 11122 245555554332 3444 33556667666666666999999887
No 474
>3r12_A Deoxyribose-phosphate aldolase; TIM beta/alpha-barrel, structural genomics, joint center for structural genomics, JCSG; HET: MSE CIT; 1.75A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 1o0y_A* 3r13_A*
Probab=32.11 E-value=2.6e+02 Score=24.47 Aligned_cols=152 Identities=13% Similarity=0.057 Sum_probs=92.4
Q ss_pred CCchhHHHHHHHHHhCCCcEEEEeccCCCCCCCCcHHHHHHHHHHHHHhCCCcEEEEee--cCCCCCH----HHHHHHHH
Q 018731 131 PDPMEPENTAKAIASWGVDYIVLTSVDRDDIPDGGSGHFARTVKAMKKQKPDIMVECLT--SDFRGDL----RAVETLVH 204 (351)
Q Consensus 131 ~~~eei~~~~~~~~~~G~~~I~ltgg~~~~l~~~~~~~~~~li~~ik~~~p~i~i~~~~--~~~~~~~----e~l~~L~~ 204 (351)
.+.+++.+.++++.+.|+..|++. | .++....+.++. .++.+.+.. |.+..+. ...+...+
T Consensus 56 ~t~~~I~~lc~eA~~~~~aaVCV~---p--------~~V~~a~~~L~g--s~v~v~tVigFP~G~~~~~~Kv~Ea~~Ai~ 122 (260)
T 3r12_A 56 ATPDDIKKLCLEARENRFHGVCVN---P--------CYVKLAREELEG--TDVKVVTVVGFPLGANETRTKAHEAIFAVE 122 (260)
T ss_dssp CCHHHHHHHHHHHHHTTCSEEEEC---G--------GGHHHHHHHHTT--SCCEEEEEESTTTCCSCHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHhcCCcEEEEC---H--------HHHHHHHHHhcC--CCCeEEEEecCCCCCCcHHHHHHHHHHHHH
Confidence 467889999999999999999982 1 122222233332 356665432 3232221 34455667
Q ss_pred cCCCeeecchhchHHHHhhhcCCCCCHHHHHHHHHHHHHhCCCCeEEEeeeeeCCCCHHHHHHHHHHHHhCCCCEEeeec
Q 018731 205 SGLDVFAHNIETVKRLQRIVRDPRAGYEQSLEVLKHAKLSKKGLITKSSIMLGLGESDDDLKEAMADLRSIDVDILTLGQ 284 (351)
Q Consensus 205 aG~~~i~~~ies~~~~~~~~r~~~~~~~~~l~~i~~~~~~~~Gi~v~~~~IvGlgEt~e~~~~~l~~l~~lg~d~i~i~~ 284 (351)
.|.|.|-+-+.-. .++ ..+++...+-|+.+++...|..++.-+=.|+ -|++++....+...+.|+|+|-.+
T Consensus 123 ~GAdEIDmViNig-----~lk--~g~~~~v~~eI~~v~~a~~~~~lKVIlEt~~-Lt~eei~~A~~ia~eaGADfVKTS- 193 (260)
T 3r12_A 123 SGADEIDMVINVG-----MLK--AKEWEYVYEDIRSVVESVKGKVVKVIIETCY-LDTEEKIAACVISKLAGAHFVKTS- 193 (260)
T ss_dssp HTCSEEEEECCHH-----HHH--TTCHHHHHHHHHHHHHHTTTSEEEEECCGGG-CCHHHHHHHHHHHHHTTCSEEECC-
T ss_pred cCCCEEEEEeehh-----hhc--cccHHHHHHHHHHHHHhcCCCcEEEEEeCCC-CCHHHHHHHHHHHHHhCcCEEEcC-
Confidence 7999875432211 122 4578888888888887655665544333343 477899999999999999988763
Q ss_pred ccCCCCCcccccCCCCHHHHHHHHHHH
Q 018731 285 YLQPTPLHLTVKEYVTPEKFDFWKAYG 311 (351)
Q Consensus 285 ~l~PTp~~~~~~~~v~~~e~~~~~~~~ 311 (351)
|.+. ....+.++...+++..
T Consensus 194 ----TGf~---~~GAT~edV~lm~~~v 213 (260)
T 3r12_A 194 ----TGFG---TGGATAEDVHLMKWIV 213 (260)
T ss_dssp ----CSSS---SCCCCHHHHHHHHHHH
T ss_pred ----CCCC---CCCCCHHHHHHHHHHh
Confidence 3332 1234556666665543
No 475
>3e96_A Dihydrodipicolinate synthase; structural genomics, nysgrc, target 9375C, operon, PSI-2; 1.80A {Bacillus clausii ksm-k16} SCOP: c.1.10.0
Probab=31.99 E-value=81 Score=28.39 Aligned_cols=78 Identities=14% Similarity=0.070 Sum_probs=51.0
Q ss_pred CCCchhHHHHHHHHHhCCCcEEEEec--cCCCCCCCCcHHHHHHHHHHHHHhCC-CcEEEEeecCCCCCH---HHHHHHH
Q 018731 130 PPDPMEPENTAKAIASWGVDYIVLTS--VDRDDIPDGGSGHFARTVKAMKKQKP-DIMVECLTSDFRGDL---RAVETLV 203 (351)
Q Consensus 130 ~~~~eei~~~~~~~~~~G~~~I~ltg--g~~~~l~~~~~~~~~~li~~ik~~~p-~i~i~~~~~~~~~~~---e~l~~L~ 203 (351)
..+.+...+.++.+.+.|++.+++.| |+...|. .+.-.++++.+.+... .+.|-+-+. . .+. +..+...
T Consensus 29 ~iD~~~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls---~eEr~~v~~~~v~~~~grvpViaGvg-~-~t~~ai~la~~A~ 103 (316)
T 3e96_A 29 SIDWHHYKETVDRIVDNGIDVIVPCGNTSEFYALS---LEEAKEEVRRTVEYVHGRALVVAGIG-Y-ATSTAIELGNAAK 103 (316)
T ss_dssp CBCHHHHHHHHHHHHTTTCCEECTTSGGGTGGGSC---HHHHHHHHHHHHHHHTTSSEEEEEEC-S-SHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHcCCCEEEeCccccCcccCC---HHHHHHHHHHHHHHhCCCCcEEEEeC-c-CHHHHHHHHHHHH
Confidence 45677888999999999999998855 5555555 3566667776665432 355443332 2 244 4555677
Q ss_pred HcCCCeeec
Q 018731 204 HSGLDVFAH 212 (351)
Q Consensus 204 ~aG~~~i~~ 212 (351)
++|.|.+.+
T Consensus 104 ~~Gadavlv 112 (316)
T 3e96_A 104 AAGADAVMI 112 (316)
T ss_dssp HHTCSEEEE
T ss_pred hcCCCEEEE
Confidence 779999864
No 476
>1ht6_A AMY1, alpha-amylase isozyme 1; barley, beta-alpha-barrel, hydrolase; 1.50A {Hordeum vulgare} SCOP: b.71.1.1 c.1.8.1 PDB: 1p6w_A* 1rpk_A* 3bsg_A 2qpu_A* 1rp8_A* 1rp9_A* 2qps_A 3bsh_A* 1ava_A 1amy_A 1bg9_A*
Probab=31.87 E-value=54 Score=30.50 Aligned_cols=62 Identities=15% Similarity=0.142 Sum_probs=0.0
Q ss_pred HHHHHHHHcCCCeeecc--hhchH-------HHHhhh-cCCCCCHHHHHHHHHHHHHhCCCCeEEEeeeeeC-CCC
Q 018731 197 RAVETLVHSGLDVFAHN--IETVK-------RLQRIV-RDPRAGYEQSLEVLKHAKLSKKGLITKSSIMLGL-GES 261 (351)
Q Consensus 197 e~l~~L~~aG~~~i~~~--ies~~-------~~~~~~-r~~~~~~~~~l~~i~~~~~~~~Gi~v~~~~IvGl-gEt 261 (351)
+.|+.|++.|++.|.+. .++.. ..+..- . .-.+.++..+.++.+++ .||+|-.++++.+ +..
T Consensus 25 ~~ldyl~~lGv~~i~l~Pi~~~~~~~gY~~~d~~~id~~-~~Gt~~d~~~lv~~~h~--~Gi~VilD~V~NH~~~~ 97 (405)
T 1ht6_A 25 GKVDDIAAAGVTHVWLPPPSHSVSNEGYMPGRLYDIDAS-KYGNAAELKSLIGALHG--KGVQAIADIVINHRCAD 97 (405)
T ss_dssp TTHHHHHHTTCCEEEECCCSCBSSTTSSSBCCTTCGGGC-TTCCHHHHHHHHHHHHH--TTCEEEEEECCSBCCCS
T ss_pred HHHHHHHHcCCCEEEeCCCccCCCCCCCCccccccCCCc-cCCCHHHHHHHHHHHHH--CCCEEEEEECcCcccCC
No 477
>1icp_A OPR1, 12-oxophytodienoate reductase 1; beta-alpha-barrel, protein-FMN-PEG complex, oxidoreductase; HET: FMN 2PE; 1.90A {Solanum lycopersicum} SCOP: c.1.4.1 PDB: 1icq_A* 1ics_A* 3hgr_A* 1vji_A* 2q3r_A*
Probab=31.84 E-value=1.5e+02 Score=27.37 Aligned_cols=86 Identities=14% Similarity=0.092 Sum_probs=46.5
Q ss_pred HHHHHHHHcCCCeeecchhc---hHHHH-hhh--c-C-CCCCHHH----HHHHHHHHHHhC-CCCeEEEee-----eeeC
Q 018731 197 RAVETLVHSGLDVFAHNIET---VKRLQ-RIV--R-D-PRAGYEQ----SLEVLKHAKLSK-KGLITKSSI-----MLGL 258 (351)
Q Consensus 197 e~l~~L~~aG~~~i~~~ies---~~~~~-~~~--r-~-~~~~~~~----~l~~i~~~~~~~-~Gi~v~~~~-----IvGl 258 (351)
+.++..+++|+|.|-++.-. ++++. ... | + -+.+.+. .++.++.+++.. .+ .|..-+ .-|+
T Consensus 171 ~AA~~a~~aGfDgVEih~a~GyLl~qFlsp~~N~R~D~yGGslenR~r~~~eiv~aVr~avg~~-~V~vrls~~~~~~g~ 249 (376)
T 1icp_A 171 VAARNAIEAGFDGVEIHGAHGYLIDQFMKDQVNDRSDKYGGSLENRCRFALEIVEAVANEIGSD-RVGIRISPFAHYNEA 249 (376)
T ss_dssp HHHHHHHHTTCSEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHHCGG-GEEEEECTTCCTTTC
T ss_pred HHHHHHHHcCCCEEEEcCccchhhhhccCCcccCCCCccCccHHHhHHHHHHHHHHHHHHhcCC-ceEEEeccccccCCC
Confidence 45667788999998765321 12221 110 0 0 1223433 344444444422 12 222222 1122
Q ss_pred --CCCHHHHHHHHHHHHhCCCCEEeee
Q 018731 259 --GESDDDLKEAMADLRSIDVDILTLG 283 (351)
Q Consensus 259 --gEt~e~~~~~l~~l~~lg~d~i~i~ 283 (351)
+++.++..+.++.+.+.|++.+.+.
T Consensus 250 ~~~~~~~~~~~la~~le~~Gvd~i~v~ 276 (376)
T 1icp_A 250 GDTNPTALGLYMVESLNKYDLAYCHVV 276 (376)
T ss_dssp CCSCHHHHHHHHHHHHGGGCCSEEEEE
T ss_pred CCCCCHHHHHHHHHHHHHcCCCEEEEc
Confidence 4567788899999999999999884
No 478
>3hzh_A Chemotaxis response regulator (CHEY-3); phosphatase, complex, response regulator, receiver domain, two-component signal transduction; HET: BFD; 1.96A {Borrelia burgdorferi}
Probab=31.77 E-value=1.6e+02 Score=22.42 Aligned_cols=39 Identities=13% Similarity=0.181 Sum_probs=27.8
Q ss_pred HHHHHHHHHhCCCcEEEEeecCCCCCHHHHHHHHHcCCCee
Q 018731 170 ARTVKAMKKQKPDIMVECLTSDFRGDLRAVETLVHSGLDVF 210 (351)
Q Consensus 170 ~~li~~ik~~~p~i~i~~~~~~~~~~~e~l~~L~~aG~~~i 210 (351)
.++++.+++..|++.|-+++.. .+.+......++|++.+
T Consensus 99 ~~~~~~lr~~~~~~~ii~ls~~--~~~~~~~~~~~~g~~~~ 137 (157)
T 3hzh_A 99 ITCLSNIMEFDKNARVIMISAL--GKEQLVKDCLIKGAKTF 137 (157)
T ss_dssp HHHHHHHHHHCTTCCEEEEESC--CCHHHHHHHHHTTCSEE
T ss_pred HHHHHHHHhhCCCCcEEEEecc--CcHHHHHHHHHcCCCEE
Confidence 5677788877777766555543 26777888888898866
No 479
>3m0z_A Putative aldolase; MCSG, PSI-2, structural genomics, protein structure initiative, midwest center for structural genomics, lyase; HET: MSE; 1.20A {Klebsiella pneumoniae subsp} PDB: 3nzr_A 3lm7_A
Probab=31.77 E-value=2.5e+02 Score=24.20 Aligned_cols=68 Identities=13% Similarity=0.133 Sum_probs=45.0
Q ss_pred HHHHHHHHHhCCCcEEEEeccCCCCCCCCcHHHHHHHHHHHHHhCCCcEEEEeecCCC-CC--HHHHHHHHHcCCCeee
Q 018731 136 PENTAKAIASWGVDYIVLTSVDRDDIPDGGSGHFARTVKAMKKQKPDIMVECLTSDFR-GD--LRAVETLVHSGLDVFA 211 (351)
Q Consensus 136 i~~~~~~~~~~G~~~I~ltgg~~~~l~~~~~~~~~~li~~ik~~~p~i~i~~~~~~~~-~~--~e~l~~L~~aG~~~i~ 211 (351)
++..+..+.++|...+-|---.. +. -.+.+..+.++..+. ++.++- ++++ ++ ++.++...++|+..|-
T Consensus 147 vetAiaml~dmG~~SvKffPm~G--l~--~l~E~~avAka~a~~--g~~lEP--TGGIdl~N~~~I~~i~l~aGv~~vi 217 (249)
T 3m0z_A 147 LETAIALLKDMGGSSIKYFPMGG--LK--HRAEFEAVAKACAAH--DFWLEP--TGGIDLENYSEILKIALDAGVSKII 217 (249)
T ss_dssp HHHHHHHHHHTTCCEEEECCCTT--TT--THHHHHHHHHHHHHT--TCEEEE--BSSCCTTTHHHHHHHHHHHTCSCBC
T ss_pred HHHHHHHHHHcCCCeeeEeecCC--cc--cHHHHHHHHHHHHHc--CceECC--CCCccHhhHHHHHHHHHHcCCCeec
Confidence 45556667889999997632211 11 146777788777776 676663 3332 22 6899999999999874
No 480
>3ajx_A 3-hexulose-6-phosphate synthase; HPS, OMPDC suprafamily, LYA; 1.60A {Mycobacterium gastri}
Probab=31.48 E-value=2.1e+02 Score=23.27 Aligned_cols=123 Identities=16% Similarity=0.094 Sum_probs=0.0
Q ss_pred CCchhHHHHHHHHHhCCCcEEEEeccCCCCCCCCcHHHHHHHHHHHHHhCCCcEEEEeecCCCCC-HHH-HHHHHHcCCC
Q 018731 131 PDPMEPENTAKAIASWGVDYIVLTSVDRDDIPDGGSGHFARTVKAMKKQKPDIMVECLTSDFRGD-LRA-VETLVHSGLD 208 (351)
Q Consensus 131 ~~~eei~~~~~~~~~~G~~~I~ltgg~~~~l~~~~~~~~~~li~~ik~~~p~i~i~~~~~~~~~~-~e~-l~~L~~aG~~ 208 (351)
.+.++..+.++.+.. |+..+-++-+.. ...=.++++.+++.+|+..+-+ .-...| .+. ++.+.++|.|
T Consensus 10 ~~~~~~~~~~~~~~~-~v~~iev~~~~~-------~~~g~~~i~~l~~~~~~~~i~~--~l~~~di~~~~~~~a~~~Gad 79 (207)
T 3ajx_A 10 LSTEAALELAGKVAE-YVDIIELGTPLI-------KAEGLSVITAVKKAHPDKIVFA--DMKTMDAGELEADIAFKAGAD 79 (207)
T ss_dssp SCHHHHHHHHHHHGG-GCSEEEECHHHH-------HHHCTHHHHHHHHHSTTSEEEE--EEEECSCHHHHHHHHHHTTCS
T ss_pred CCHHHHHHHHHHhhc-cCCEEEECcHHH-------HhhCHHHHHHHHHhCCCCeEEE--EEEecCccHHHHHHHHhCCCC
Q ss_pred eeecchhchHHHHhhhcCCCCCHHHHHHHHHHHHHhCCCCeEEEeeeeeCCCCHHHHHHHHHHHHhCCCCEEeee
Q 018731 209 VFAHNIETVKRLQRIVRDPRAGYEQSLEVLKHAKLSKKGLITKSSIMLGLGESDDDLKEAMADLRSIDVDILTLG 283 (351)
Q Consensus 209 ~i~~~ies~~~~~~~~r~~~~~~~~~l~~i~~~~~~~~Gi~v~~~~IvGlgEt~e~~~~~l~~l~~lg~d~i~i~ 283 (351)
.+.+. .....+...++++.+++ .|+.+...+. --.|.++ .++.+.+.++|.+.++
T Consensus 80 ~v~vh-------------~~~~~~~~~~~~~~~~~--~g~~~gv~~~--s~~~p~~---~~~~~~~~g~d~v~~~ 134 (207)
T 3ajx_A 80 LVTVL-------------GSADDSTIAGAVKAAQA--HNKGVVVDLI--GIEDKAT---RAQEVRALGAKFVEMH 134 (207)
T ss_dssp EEEEE-------------TTSCHHHHHHHHHHHHH--HTCEEEEECT--TCSSHHH---HHHHHHHTTCSEEEEE
T ss_pred EEEEe-------------ccCChHHHHHHHHHHHH--cCCceEEEEe--cCCChHH---HHHHHHHhCCCEEEEE
No 481
>4a29_A Engineered retro-aldol enzyme RA95.0; de novo protein, engineered enzyme, retro-aldolase, directed evolution; HET: 3NK MLT; 1.10A {Synthetic construct} PDB: 4a2s_A* 4a2r_A* 3tc7_A 3tc6_A 3nl8_A* 3nxf_A* 3o6y_X 3ud6_A* 1igs_A 1juk_A 1jul_A* 3hoj_A 1a53_A* 1lbf_A* 1lbl_A* 3nyz_A 3nz1_A* 3uy7_A 3uxd_A* 3uxa_A* ...
Probab=31.47 E-value=93 Score=27.33 Aligned_cols=71 Identities=15% Similarity=0.228 Sum_probs=0.0
Q ss_pred HHHHHHHHhCCCcEEEEeccCCCCCCCCcHHHHHHHHHHHHHhCCCcEEEEeecCCCCCHHHHHHHHHcCCCeeecc
Q 018731 137 ENTAKAIASWGVDYIVLTSVDRDDIPDGGSGHFARTVKAMKKQKPDIMVECLTSDFRGDLRAVETLVHSGLDVFAHN 213 (351)
Q Consensus 137 ~~~~~~~~~~G~~~I~ltgg~~~~l~~~~~~~~~~li~~ik~~~p~i~i~~~~~~~~~~~e~l~~L~~aG~~~i~~~ 213 (351)
.++++.+.+.|.+-| |.+.-+|.. ++-=.+....+....|.-.+.+.-.+.. +.+.+..++++|++.+-+|
T Consensus 163 ~~El~rAl~~~a~iI---GINNRnL~t--f~vdl~~t~~L~~~ip~~~~~VsESGI~-t~~dv~~l~~~G~~a~LVG 233 (258)
T 4a29_A 163 ENDLDIALRIGARFI---GIMSRDFET--GEINKENQRKLISMIPSNVVKVAKLGIS-ERNEIEELRKLGVNAFLIS 233 (258)
T ss_dssp HHHHHHHHHTTCSEE---EECSBCTTT--CCBCHHHHHHHHTTSCTTSEEEEEESSC-CHHHHHHHHHTTCCEEEEC
T ss_pred HHHHHHHhcCCCcEE---EEeCCCccc--cccCHHHHHHHHhhCCCCCEEEEcCCCC-CHHHHHHHHHCCCCEEEEC
No 482
>1qo2_A Molecule: N-((5-phosphoribosyl)-formimino)-5-aminoimidazol- 4-carboxamid ribonucleotid...; isomerase, histidine biosynthesis; 1.85A {Thermotoga maritima} SCOP: c.1.2.1 PDB: 2cff_A 2w79_A
Probab=31.46 E-value=1.3e+02 Score=25.41 Aligned_cols=71 Identities=17% Similarity=0.256 Sum_probs=44.3
Q ss_pred HHHHHHHHHhCCCcEEEEeccCCCC-CCCCcHHHHHHHHHHHHHhCCCcEEEEeecCCCCCHHHHHHHHHc-----C-CC
Q 018731 136 PENTAKAIASWGVDYIVLTSVDRDD-IPDGGSGHFARTVKAMKKQKPDIMVECLTSDFRGDLRAVETLVHS-----G-LD 208 (351)
Q Consensus 136 i~~~~~~~~~~G~~~I~ltgg~~~~-l~~~~~~~~~~li~~ik~~~p~i~i~~~~~~~~~~~e~l~~L~~a-----G-~~ 208 (351)
..+.++.+.+.|+..|++++-..+. ....+ .++++.+++.. ++.+-+ .++..+.+.+..+.++ | ++
T Consensus 146 ~~e~~~~~~~~G~~~i~~t~~~~~g~~~g~~----~~~i~~l~~~~-~iPvia--~GGI~~~~d~~~~~~~~~~~~G~ad 218 (241)
T 1qo2_A 146 PVSLLKRLKEYGLEEIVHTEIEKDGTLQEHD----FSLTKKIAIEA-EVKVLA--AGGISSENSLKTAQKVHTETNGLLK 218 (241)
T ss_dssp HHHHHHHHHTTTCCEEEEEETTHHHHTCCCC----HHHHHHHHHHH-TCEEEE--ESSCCSHHHHHHHHHHHHHTTTSEE
T ss_pred HHHHHHHHHhCCCCEEEEEeecccccCCcCC----HHHHHHHHHhc-CCcEEE--ECCCCCHHHHHHHHhcccccCCeEe
Confidence 3445566677999999998743211 11111 34455555542 455533 4566678899999988 9 99
Q ss_pred eeecc
Q 018731 209 VFAHN 213 (351)
Q Consensus 209 ~i~~~ 213 (351)
.+.++
T Consensus 219 gv~vg 223 (241)
T 1qo2_A 219 GVIVG 223 (241)
T ss_dssp EEEEC
T ss_pred EEEee
Confidence 88765
No 483
>3r12_A Deoxyribose-phosphate aldolase; TIM beta/alpha-barrel, structural genomics, joint center for structural genomics, JCSG; HET: MSE CIT; 1.75A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 1o0y_A* 3r13_A*
Probab=31.42 E-value=2.7e+02 Score=24.39 Aligned_cols=75 Identities=11% Similarity=0.042 Sum_probs=47.2
Q ss_pred CCchhHHHHHHHHHhCCCcEEEEeccCCCCCCCCcHHHHHHHHHHHHHhCCCcEEEEeecCCCCCHHHHHHHHHcCCCee
Q 018731 131 PDPMEPENTAKAIASWGVDYIVLTSVDRDDIPDGGSGHFARTVKAMKKQKPDIMVECLTSDFRGDLRAVETLVHSGLDVF 210 (351)
Q Consensus 131 ~~~eei~~~~~~~~~~G~~~I~ltgg~~~~l~~~~~~~~~~li~~ik~~~p~i~i~~~~~~~~~~~e~l~~L~~aG~~~i 210 (351)
++.+++...++...+.|.+.|--+.|-.+ ..-..+.+ ++++..- .+.+.|.+ .++..+.+.+..+.++|.++|
T Consensus 170 Lt~eei~~A~~ia~eaGADfVKTSTGf~~--~GAT~edV-~lm~~~v--g~~v~VKa--AGGIrt~~~al~mi~aGA~Ri 242 (260)
T 3r12_A 170 LDTEEKIAACVISKLAGAHFVKTSTGFGT--GGATAEDV-HLMKWIV--GDEMGVKA--SGGIRTFEDAVKMIMYGADRI 242 (260)
T ss_dssp CCHHHHHHHHHHHHHTTCSEEECCCSSSS--CCCCHHHH-HHHHHHH--CTTSEEEE--ESSCCSHHHHHHHHHTTCSEE
T ss_pred CCHHHHHHHHHHHHHhCcCEEEcCCCCCC--CCCCHHHH-HHHHHHh--CCCceEEE--eCCCCCHHHHHHHHHcCCcee
Confidence 45678888888888899998865433211 11012332 3333332 34577776 455668888889999999987
Q ss_pred ec
Q 018731 211 AH 212 (351)
Q Consensus 211 ~~ 212 (351)
..
T Consensus 243 Gt 244 (260)
T 3r12_A 243 GT 244 (260)
T ss_dssp EE
T ss_pred ec
Confidence 53
No 484
>1gcy_A Glucan 1,4-alpha-maltotetrahydrolase; beta-alpha-barrel, beta sheet; 1.60A {Pseudomonas stutzeri} SCOP: b.71.1.1 c.1.8.1 PDB: 1jdc_A* 1jda_A* 1jdd_A* 1qi5_A* 1qi3_A* 1qi4_A* 2amg_A 1qpk_A*
Probab=31.31 E-value=74 Score=30.78 Aligned_cols=28 Identities=7% Similarity=-0.080 Sum_probs=26.2
Q ss_pred CCHHHHHHHHHHHHHhCCCCeEEEeeeeeC
Q 018731 229 AGYEQSLEVLKHAKLSKKGLITKSSIMLGL 258 (351)
Q Consensus 229 ~~~~~~l~~i~~~~~~~~Gi~v~~~~IvGl 258 (351)
.+.++..+.++.+|+ .||+|-.++++.+
T Consensus 90 Gt~~dfk~Lv~~aH~--~GI~VilD~V~NH 117 (527)
T 1gcy_A 90 GSDAQLRQAASALGG--AGVKVLYDVVPNH 117 (527)
T ss_dssp CCHHHHHHHHHHHHH--TTCEEEEEECCSB
T ss_pred CCHHHHHHHHHHHHH--CCCEEEEEEeecC
Confidence 589999999999999 9999999999987
No 485
>2wqp_A Polysialic acid capsule biosynthesis protein SIAC; NEUB, inhibitor, TIM barrel, sialic acid synthase, transfera; HET: WQP; 1.75A {Neisseria meningitidis} PDB: 2zdr_A 1xuz_A* 1xuu_A 3cm4_A
Probab=31.16 E-value=1.1e+02 Score=28.18 Aligned_cols=67 Identities=13% Similarity=0.037 Sum_probs=48.8
Q ss_pred eeeeeC----CCCHHHHHHHHHHHHhCCCCEEeeecccCC----CCCc--cccc------------CCCCHHHHHHHHHH
Q 018731 253 SIMLGL----GESDDDLKEAMADLRSIDVDILTLGQYLQP----TPLH--LTVK------------EYVTPEKFDFWKAY 310 (351)
Q Consensus 253 ~~IvGl----gEt~e~~~~~l~~l~~lg~d~i~i~~~l~P----Tp~~--~~~~------------~~v~~~e~~~~~~~ 310 (351)
.+|.|. .++.|...++++.+++.|+|.+-+. ...| ||.. .... -.++.+.+..+.++
T Consensus 21 ~iIAe~g~NH~gs~e~a~~li~~ak~aGadavKfq-~~k~~tl~s~~~~~fq~~~~~~~~y~~~~~~~l~~e~~~~L~~~ 99 (349)
T 2wqp_A 21 LIICEIGINHEGSLKTAFEMVDAAYNAGAEVVKHQ-THIVEDEMSDEAKQVIPGNADVSIYEIMERCALNEEDEIKLKEY 99 (349)
T ss_dssp EEEEEEETTTTTCHHHHHHHHHHHHHHTCSEEEEE-ECCHHHHCCGGGGGCCCTTCSSCHHHHHHHHCCCHHHHHHHHHH
T ss_pred EEEEecCCcccCCHHHHHHHHHHHHHhCCCEEeee-ecccccccCcchhccccCCCCccHHHHHHHhCCCHHHHHHHHHH
Confidence 355544 5799999999999999999999994 4456 3422 1110 14677888889999
Q ss_pred HHhcCcceec
Q 018731 311 GESIGFRYVA 320 (351)
Q Consensus 311 ~~~~G~~~~~ 320 (351)
+++.|...+.
T Consensus 100 ~~~~Gi~~~s 109 (349)
T 2wqp_A 100 VESKGMIFIS 109 (349)
T ss_dssp HHHTTCEEEE
T ss_pred HHHhCCeEEE
Confidence 9999987653
No 486
>3pjx_A Cyclic dimeric GMP binding protein; ggdef-EAL tandem domain, C-DI-GMP receptor, lyase; 2.00A {Pseudomonas fluorescens} PDB: 3pjw_A 3pju_A* 3pjt_A* 3pfm_A
Probab=31.15 E-value=1.7e+02 Score=27.16 Aligned_cols=48 Identities=15% Similarity=0.183 Sum_probs=28.3
Q ss_pred HHHH-HHHHHHhCCCCeEEEeeeeeCCCCHHHHHHHHHHHHhCCCCEEeeecccCCCCC
Q 018731 234 SLEV-LKHAKLSKKGLITKSSIMLGLGESDDDLKEAMADLRSIDVDILTLGQYLQPTPL 291 (351)
Q Consensus 234 ~l~~-i~~~~~~~~Gi~v~~~~IvGlgEt~e~~~~~l~~l~~lg~d~i~i~~~l~PTp~ 291 (351)
.++. +..++. .|+.|-+. | -||.++ +++++++|++.+.=+.|.+|.|.
T Consensus 381 ~~~~i~~~a~~--l~~~viae---G-VEt~~~----~~~l~~~g~~~~QG~~~~~P~p~ 429 (430)
T 3pjx_A 381 FIEAIQRAAHS--IDLPLIAE---R-VETEGE----LSVIREMGLYGVQGQLFGEPKPW 429 (430)
T ss_dssp HHHHHHHHHHT--TTCCEEEC---C-CCCHHH----HHHHHHTTCSEEESGGGCCCBCC
T ss_pred HHHHHHHHHHH--CCCcEEEE---e-cCCHHH----HHHHHHcCCCeecccccCCCCCC
Confidence 3444 345565 67764222 2 367665 46778999998765434466553
No 487
>1wzl_A Alpha-amylase II; pullulan, GH-13, alpha-amylase family, hydrolase; 2.00A {Thermoactinomyces vulgaris} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 PDB: 1ji2_A 1bvz_A 1vfk_A* 3a6o_A* 1wzm_A 1jf6_A 1wzk_A 2d2o_A* 1jib_A* 1jl8_A* 1vb9_A* 1g1y_A* 1vfo_A* 1vfm_A* 1vfu_A* 1jf5_A
Probab=31.06 E-value=61 Score=31.88 Aligned_cols=61 Identities=11% Similarity=0.153 Sum_probs=43.3
Q ss_pred CCCHHHHHHHHHHHHhCCCCEEeeeccc-CCCC-Cc------ccccCCCCHHHHHHHHHHHHhcCccee
Q 018731 259 GESDDDLKEAMADLRSIDVDILTLGQYL-QPTP-LH------LTVKEYVTPEKFDFWKAYGESIGFRYV 319 (351)
Q Consensus 259 gEt~e~~~~~l~~l~~lg~d~i~i~~~l-~PTp-~~------~~~~~~v~~~e~~~~~~~~~~~G~~~~ 319 (351)
|-+...+.+.|+.|+++|++.|.+++.. .|+. .+ .....+-+++++.++.+.+.+.|..-+
T Consensus 169 ~G~~~gi~~~LdyLk~LGvt~I~L~Pi~~~~~~~GYd~~dy~~id~~~Gt~~dfk~lv~~~H~~Gi~Vi 237 (585)
T 1wzl_A 169 GGDLKGVIDRLPYLEELGVTALYFTPIFASPSHHKYDTADYLAIDPQFGDLPTFRRLVDEAHRRGIKII 237 (585)
T ss_dssp CCCHHHHHHTHHHHHHHTCCEEEECCCEECSSSSCCSCSEEEEECTTTCCHHHHHHHHHHHHTTTCEEE
T ss_pred CCCHHHHHHHhHHHHHcCCCEEEECCcccCCCCCCcCcccccccCcccCCHHHHHHHHHHHHHCCCEEE
Confidence 4477888888999999999998886544 2211 11 111245578999999999999998754
No 488
>1vrd_A Inosine-5'-monophosphate dehydrogenase; TM1347, structural G joint center for structural genomics, JCSG, protein structu initiative, PSI; 2.18A {Thermotoga maritima} SCOP: c.1.5.1
Probab=30.97 E-value=1.5e+02 Score=28.37 Aligned_cols=68 Identities=22% Similarity=0.312 Sum_probs=46.4
Q ss_pred HHHHHHHHHcCCCeeecchhchHHHHhhhcCCCCCHHHHHHHHHHHHHhCCCCeEEEeeeeeCCCCHHHHHHHHHHHHhC
Q 018731 196 LRAVETLVHSGLDVFAHNIETVKRLQRIVRDPRAGYEQSLEVLKHAKLSKKGLITKSSIMLGLGESDDDLKEAMADLRSI 275 (351)
Q Consensus 196 ~e~l~~L~~aG~~~i~~~ies~~~~~~~~r~~~~~~~~~l~~i~~~~~~~~Gi~v~~~~IvGlgEt~e~~~~~l~~l~~l 275 (351)
.+.++.+.++|++.+.++.- ...+...++.++.+++..+++.+ ++|-+-|.++. +.+.+.
T Consensus 239 ~~~a~~l~~aGvd~v~i~~~------------~G~~~~~~e~i~~i~~~~p~~pv----i~g~~~t~e~a----~~l~~~ 298 (494)
T 1vrd_A 239 MERVEKLVKAGVDVIVIDTA------------HGHSRRVIETLEMIKADYPDLPV----VAGNVATPEGT----EALIKA 298 (494)
T ss_dssp HHHHHHHHHTTCSEEEECCS------------CCSSHHHHHHHHHHHHHCTTSCE----EEEEECSHHHH----HHHHHT
T ss_pred HHHHHHHHHhCCCEEEEEec------------CCchHHHHHHHHHHHHHCCCceE----EeCCcCCHHHH----HHHHHc
Confidence 68899999999999876431 11334566777777775446654 33555676665 555679
Q ss_pred CCCEEeee
Q 018731 276 DVDILTLG 283 (351)
Q Consensus 276 g~d~i~i~ 283 (351)
|+|.+.++
T Consensus 299 G~d~I~v~ 306 (494)
T 1vrd_A 299 GADAVKVG 306 (494)
T ss_dssp TCSEEEEC
T ss_pred CCCEEEEc
Confidence 99998873
No 489
>1zlp_A PSR132, petal death protein; TIM-barrel, helix swapping,2-ethyl-3-methylmalate lyase, 2-P methylmalate lyase, lyase/PEP mutase superfamily; 2.70A {Dianthus caryophyllus}
Probab=30.94 E-value=3e+02 Score=24.82 Aligned_cols=139 Identities=9% Similarity=0.024 Sum_probs=77.1
Q ss_pred HHHHHhCCCcEEEEec--------cCCCCCCCCcHHHHHHHHHHHHHhCCCcEEEEeecCCCCCH----HHHHHHHHcCC
Q 018731 140 AKAIASWGVDYIVLTS--------VDRDDIPDGGSGHFARTVKAMKKQKPDIMVECLTSDFRGDL----RAVETLVHSGL 207 (351)
Q Consensus 140 ~~~~~~~G~~~I~ltg--------g~~~~l~~~~~~~~~~li~~ik~~~p~i~i~~~~~~~~~~~----e~l~~L~~aG~ 207 (351)
++.+.+.|++-|+++| |.|| ...-.++.+...++.|.+..+++.|-+=-+.+..+. +.+..+.++|+
T Consensus 52 A~i~e~aGfdai~vs~~~~a~~~lG~pD-~~~vt~~em~~~~~~I~r~~~~~PviaD~d~Gyg~~~~v~~tv~~l~~aGa 130 (318)
T 1zlp_A 52 AAVVEKTGFHAAFVSGYSVSAAMLGLPD-FGLLTTTEVVEATRRITAAAPNLCVVVDGDTGGGGPLNVQRFIRELISAGA 130 (318)
T ss_dssp HHHHHHTTCSEEEECHHHHHHHHHCCCS-SSCSCHHHHHHHHHHHHHHSSSSEEEEECTTCSSSHHHHHHHHHHHHHTTC
T ss_pred HHHHHHcCCCEEEECcHHHhhHhcCCCC-CCCCCHHHHHHHHHHHHhhccCCCEEEeCCCCCCCHHHHHHHHHHHHHcCC
Confidence 3445568999999987 2232 222346788888888887665666544223232343 56777889999
Q ss_pred CeeecchhchHHHHhhhcC-CCCCHHHHHHHHHHHHHhCCCCeEEEeeeeeCCCCH-----HHHHHHHHHHHhCCCCEEe
Q 018731 208 DVFAHNIETVKRLQRIVRD-PRAGYEQSLEVLKHAKLSKKGLITKSSIMLGLGESD-----DDLKEAMADLRSIDVDILT 281 (351)
Q Consensus 208 ~~i~~~ies~~~~~~~~r~-~~~~~~~~l~~i~~~~~~~~Gi~v~~~~IvGlgEt~-----e~~~~~l~~l~~lg~d~i~ 281 (351)
..|.+-=+...+..-.+.+ +-.+.++..+.|+.+++.. .. .-.+|.|-.+.. ++..+-.+...+.|.|.+.
T Consensus 131 agv~iED~~~~k~cgH~~gk~L~p~~e~~~rI~Aa~~A~--~~-~~~~I~ARtda~a~~gl~~ai~Ra~Ay~eAGAd~i~ 207 (318)
T 1zlp_A 131 KGVFLEDQVWPKKCGHMRGKAVVPAEEHALKIAAAREAI--GD-SDFFLVARTDARAPHGLEEGIRRANLYKEAGADATF 207 (318)
T ss_dssp CEEEEECBCSSCCCSSSSCCCBCCHHHHHHHHHHHHHHH--TT-SCCEEEEEECTHHHHHHHHHHHHHHHHHHTTCSEEE
T ss_pred cEEEECCCCCCccccCCCCCccCCHHHHHHHHHHHHHhc--cc-CCcEEEEeeHHhhhcCHHHHHHHHHHHHHcCCCEEE
Confidence 9987521111110000000 1135666666777776632 21 112344443332 3555556666778999877
Q ss_pred e
Q 018731 282 L 282 (351)
Q Consensus 282 i 282 (351)
+
T Consensus 208 ~ 208 (318)
T 1zlp_A 208 V 208 (318)
T ss_dssp E
T ss_pred E
Confidence 7
No 490
>2qgy_A Enolase from the environmental genome shotgun sequencing of the sargasso SEA; structural genomics, unknown function, PSI-2; 1.80A {Environmental sample}
Probab=30.84 E-value=3.1e+02 Score=25.07 Aligned_cols=151 Identities=9% Similarity=-0.058 Sum_probs=0.0
Q ss_pred CchhHHHHHHHHHhCCCcEEEEeccCCCCCCCCcHHHHHHHHHHHHHhC-CCcEEEEeecCCCCCH----HHHHHHHHcC
Q 018731 132 DPMEPENTAKAIASWGVDYIVLTSVDRDDIPDGGSGHFARTVKAMKKQK-PDIMVECLTSDFRGDL----RAVETLVHSG 206 (351)
Q Consensus 132 ~~eei~~~~~~~~~~G~~~I~ltgg~~~~l~~~~~~~~~~li~~ik~~~-p~i~i~~~~~~~~~~~----e~l~~L~~aG 206 (351)
++++..+.++.+.+.|++.+-+-.|..+ .+...+.++++++.. |++.+.+=.+... +. +.++.|.+.|
T Consensus 149 ~~~~~~~~a~~~~~~Gf~~vKik~g~~~------~~~~~e~v~avR~a~G~d~~l~vDan~~~-~~~~a~~~~~~l~~~~ 221 (391)
T 2qgy_A 149 DTNDYLRQIEKFYGKKYGGIKIYPMLDS------LSISIQFVEKVREIVGDELPLMLDLAVPE-DLDQTKSFLKEVSSFN 221 (391)
T ss_dssp CHHHHHHHHHHHHHTTCSCEEECCCCSS------HHHHHHHHHHHHHHHCSSSCEEEECCCCS-CHHHHHHHHHHHGGGC
T ss_pred CHHHHHHHHHHHHHcCCCEEEEccCCCh------HHHHHHHHHHHHHHhCCCCEEEEEcCCCC-CHHHHHHHHHHHHhcC
Q ss_pred CCeeecchhchHHHHhhhcCCCCCHHHHHHHHHHHHHhCCCCeEEEeeeeeCCCCHHHHHHHHHHHHhCCCCEEeeeccc
Q 018731 207 LDVFAHNIETVKRLQRIVRDPRAGYEQSLEVLKHAKLSKKGLITKSSIMLGLGESDDDLKEAMADLRSIDVDILTLGQYL 286 (351)
Q Consensus 207 ~~~i~~~ies~~~~~~~~r~~~~~~~~~l~~i~~~~~~~~Gi~v~~~~IvGlgEt~e~~~~~l~~l~~lg~d~i~i~~~l 286 (351)
++.| -..-..+-++.++.+++ .+.+.+-.+|+..+.....+.+.+-.+|.+.+
T Consensus 222 i~~i----------------EqP~~~~d~~~~~~l~~-------~~~iPIa~dE~~~~~~~~~~~i~~~~~d~v~i---- 274 (391)
T 2qgy_A 222 PYWI----------------EEPVDGENISLLTEIKN-------TFNMKVVTGEKQSGLVHFRELISRNAADIFNP---- 274 (391)
T ss_dssp CSEE----------------ECSSCTTCHHHHHHHHH-------HCSSCEEECTTCCSHHHHHHHHHTTCCSEECC----
T ss_pred CCeE----------------eCCCChhhHHHHHHHHh-------hCCCCEEEcCCcCCHHHHHHHHHcCCCCEEEE----
Q ss_pred CCCCCcccccCCCCHHHHHHHHHHHHhcCcceeccCc
Q 018731 287 QPTPLHLTVKEYVTPEKFDFWKAYGESIGFRYVASGP 323 (351)
Q Consensus 287 ~PTp~~~~~~~~v~~~e~~~~~~~~~~~G~~~~~~~~ 323 (351)
.++... ...+..++.++++..|...+.++.
T Consensus 275 k~~~~G-------Git~~~~i~~~A~~~gi~~~~~~~ 304 (391)
T 2qgy_A 275 DISGMG-------GLIDIIEISNEASNNGIFISPHCW 304 (391)
T ss_dssp BTTTSS-------CHHHHHHHHHHHHHTTCEECCBCC
T ss_pred CcchhC-------CHHHHHHHHHHHHHCCCEEeccCC
No 491
>1ypf_A GMP reductase; GUAC, purines, pyrimidines, nucleosides, nucleotides, nucleo nucleoside interconversions, spine, structural genomics; 1.80A {Bacillus anthracis} PDB: 2a1y_A*
Probab=30.77 E-value=3e+02 Score=24.74 Aligned_cols=127 Identities=17% Similarity=0.248 Sum_probs=71.5
Q ss_pred HHHHHHHHhCC--CcEEEEeccCCCCCCCCcHHHHHHHHHHHHHhCCCcEEEEeecCCCCCHHHHHHHHHcCCCeeecch
Q 018731 137 ENTAKAIASWG--VDYIVLTSVDRDDIPDGGSGHFARTVKAMKKQKPDIMVECLTSDFRGDLRAVETLVHSGLDVFAHNI 214 (351)
Q Consensus 137 ~~~~~~~~~~G--~~~I~ltgg~~~~l~~~~~~~~~~li~~ik~~~p~i~i~~~~~~~~~~~e~l~~L~~aG~~~i~~~i 214 (351)
.+.++.+.+.| +..+.+..... ......+.++.+++..++..+-. +...+.+.++.+.++|+|.|.++-
T Consensus 108 ~~~a~~~~~~g~~~~~i~i~~~~G------~~~~~~~~i~~lr~~~~~~~vi~---G~v~s~e~A~~a~~aGad~Ivvs~ 178 (336)
T 1ypf_A 108 YEFVQQLAAEHLTPEYITIDIAHG------HSNAVINMIQHIKKHLPESFVIA---GNVGTPEAVRELENAGADATKVGI 178 (336)
T ss_dssp HHHHHHHHHTTCCCSEEEEECSSC------CSHHHHHHHHHHHHHCTTSEEEE---EEECSHHHHHHHHHHTCSEEEECS
T ss_pred HHHHHHHHhcCCCCCEEEEECCCC------CcHHHHHHHHHHHHhCCCCEEEE---CCcCCHHHHHHHHHcCCCEEEEec
Confidence 34566777778 78777643221 12567889999999876544432 112478999999999999997732
Q ss_pred hch---HH-HHhhhcCCCCCHHHHHHHHHHHHHhCCCCeEEEeeee-eCCCCHHHHHHHHHHHHhCCCCEEeeecc
Q 018731 215 ETV---KR-LQRIVRDPRAGYEQSLEVLKHAKLSKKGLITKSSIML-GLGESDDDLKEAMADLRSIDVDILTLGQY 285 (351)
Q Consensus 215 es~---~~-~~~~~r~~~~~~~~~l~~i~~~~~~~~Gi~v~~~~Iv-GlgEt~e~~~~~l~~l~~lg~d~i~i~~~ 285 (351)
-.. +. ...... ...+ .+..+..+++. .++. +|. |=-.+.+|+.+.+. +|++.+.++..
T Consensus 179 hgG~~~~~~~~~~~g--~~g~--~~~~l~~v~~~-~~ip----VIa~GGI~~g~Dv~kala----lGAdaV~iGr~ 241 (336)
T 1ypf_A 179 GPGKVCITKIKTGFG--TGGW--QLAALRWCAKA-ASKP----IIADGGIRTNGDVAKSIR----FGATMVMIGSL 241 (336)
T ss_dssp SCSTTCHHHHHHSCS--STTC--HHHHHHHHHHT-CSSC----EEEESCCCSTHHHHHHHH----TTCSEEEESGG
T ss_pred CCCceeecccccCcC--Cchh--HHHHHHHHHHH-cCCc----EEEeCCCCCHHHHHHHHH----cCCCEEEeChh
Confidence 111 11 111110 1111 13444444441 2444 233 11245567766653 69999888743
No 492
>3lg3_A Isocitrate lyase; conserved, CD, proteomics evidence (cytopl periplasmic), drug target functions; 1.40A {Yersinia pestis} SCOP: c.1.12.7 PDB: 1igw_A
Probab=30.63 E-value=3e+02 Score=26.03 Aligned_cols=77 Identities=14% Similarity=0.074 Sum_probs=51.5
Q ss_pred chhHHHHHHHHHhCCCcEEEEeccCCCCCCCCcHHHHHHHHHHHHHhCCCcEEEE-eecCCC----CCHHH----HHHHH
Q 018731 133 PMEPENTAKAIASWGVDYIVLTSVDRDDIPDGGSGHFARTVKAMKKQKPDIMVEC-LTSDFR----GDLRA----VETLV 203 (351)
Q Consensus 133 ~eei~~~~~~~~~~G~~~I~ltgg~~~~l~~~~~~~~~~li~~ik~~~p~i~i~~-~~~~~~----~~~e~----l~~L~ 203 (351)
.++.++-+.++.. |.+-|++-.+.+ + .+.+.++.+.++...|...+.. .+|.+. ++++. .+.|.
T Consensus 270 ld~AI~Ra~AY~~-GAD~if~E~~~~----~--~~ei~~f~~~v~~~~P~~~La~~~sPsfnw~~~~~d~~~~~f~~eLa 342 (435)
T 3lg3_A 270 IEQAISRGLAYAP-YADLVWCETSTP----D--LALAKRFADAVHAQFPGKLLAYNCSPSFNWKKNLTDQQIASFQDELS 342 (435)
T ss_dssp HHHHHHHHHHHGG-GCSEEEECCSSC----C--HHHHHHHHHHHHHHSTTCEEEEECCSSSCHHHHSCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHc-cCCEEEecCCCC----C--HHHHHHHHHHhccccCCeEEEeCCCCCccccccCCHHHHHHHHHHHH
Confidence 4666666667777 999999833332 1 4789999999998777644432 245442 23333 57899
Q ss_pred HcCCCeeecchhc
Q 018731 204 HSGLDVFAHNIET 216 (351)
Q Consensus 204 ~aG~~~i~~~ies 216 (351)
++|+..+.+.+-.
T Consensus 343 ~lG~~~v~~~la~ 355 (435)
T 3lg3_A 343 AMGYKYQFITLAG 355 (435)
T ss_dssp HTTEEEEEETTHH
T ss_pred HcCCcEEEeCcHH
Confidence 9999998875433
No 493
>3qvq_A Phosphodiesterase OLEI02445; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, alpha-beta hydrolase, hydrolase; HET: MSE G3P; 1.60A {Oleispira antarctica}
Probab=30.55 E-value=2.5e+02 Score=23.87 Aligned_cols=84 Identities=13% Similarity=0.014 Sum_probs=0.0
Q ss_pred HHHHHHHHHhCCCcEEEEeecCCCCCHHHHHHHHHcCCCeeecchhchHHHHhhhcCCCCCHHHHHHHHHHHHHhCCCCe
Q 018731 170 ARTVKAMKKQKPDIMVECLTSDFRGDLRAVETLVHSGLDVFAHNIETVKRLQRIVRDPRAGYEQSLEVLKHAKLSKKGLI 249 (351)
Q Consensus 170 ~~li~~ik~~~p~i~i~~~~~~~~~~~e~l~~L~~aG~~~i~~~ies~~~~~~~~r~~~~~~~~~l~~i~~~~~~~~Gi~ 249 (351)
.+.++.+++..|++.+..+.... ..+....+...|++.+.......++ +.++.+++ .|+.
T Consensus 153 ~~~l~~~~~~~p~~~~~~l~~~~--~~~~~~~~~~~~~~~i~~~~~~~~~----------------~~v~~~~~--~G~~ 212 (252)
T 3qvq_A 153 YFALVSAKALWPEIARGYNVSAI--PSAWQERLEHLDCAGLHIHQSFFDV----------------QQVSDIKA--AGYK 212 (252)
T ss_dssp HHHHHHHHHHCTTSCEEEECSSC--CTTHHHHHHHHTCSEEEEEGGGCCH----------------HHHHHHHH--TTCE
T ss_pred HHHHHHHHHHCCCCcEEEEEecC--chhHHHHHHHcCCeEEecchhhCCH----------------HHHHHHHH--CCCE
Q ss_pred EEEeeeeeCCCCHHHHHHHHHHHHhCCCCEEe
Q 018731 250 TKSSIMLGLGESDDDLKEAMADLRSIDVDILT 281 (351)
Q Consensus 250 v~~~~IvGlgEt~e~~~~~l~~l~~lg~d~i~ 281 (351)
|.+-.+=- .+.++.+.++|+|.|.
T Consensus 213 v~~WTvn~--------~~~~~~l~~~GVdgIi 236 (252)
T 3qvq_A 213 VLAFTIND--------ESLALKLYNQGLDAVF 236 (252)
T ss_dssp EEEECCCC--------HHHHHHHHHTTCCEEE
T ss_pred EEEEcCCC--------HHHHHHHHHcCCCEEE
No 494
>4dad_A Putative pilus assembly-related protein; response regulator receiver domain, CHEY-related protein, ST genomics; 2.50A {Burkholderia pseudomallei} PDB: 4dn6_A
Probab=30.53 E-value=1.7e+02 Score=21.74 Aligned_cols=60 Identities=12% Similarity=0.113 Sum_probs=39.5
Q ss_pred HHHHHHHHHHHhCCCcEEEEeecCCCCCHHHHHHHHHcCCCeeecchhchHHHHhhhcCCCCCHHHHHHHHHHHHH
Q 018731 168 HFARTVKAMKKQKPDIMVECLTSDFRGDLRAVETLVHSGLDVFAHNIETVKRLQRIVRDPRAGYEQSLEVLKHAKL 243 (351)
Q Consensus 168 ~~~~li~~ik~~~p~i~i~~~~~~~~~~~e~l~~L~~aG~~~i~~~ies~~~~~~~~r~~~~~~~~~l~~i~~~~~ 243 (351)
.-.++++.+++..|++.+-+++.. .+.+.+....++|++.+-. +..+.++....++.+.+
T Consensus 81 ~g~~~~~~l~~~~~~~~ii~lt~~--~~~~~~~~~~~~ga~~~l~--------------Kp~~~~~L~~~i~~~~~ 140 (146)
T 4dad_A 81 AELAAIEKLSRLHPGLTCLLVTTD--ASSQTLLDAMRAGVRDVLR--------------WPLEPRALDDALKRAAA 140 (146)
T ss_dssp HHHHHHHHHHHHCTTCEEEEEESC--CCHHHHHHHHTTTEEEEEE--------------SSCCHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHhCCCCcEEEEeCC--CCHHHHHHHHHhCCceeEc--------------CCCCHHHHHHHHHHHHh
Confidence 446788888888788777665543 2667777777888876521 13466666666666554
No 495
>1ccw_A Protein (glutamate mutase); coenzyme B12, radical reaction, TIM-barrel rossman-fold, isomerase; HET: CNC TAR; 1.60A {Clostridium cochlearium} SCOP: c.23.6.1 PDB: 1cb7_A* 1b1a_A 1i9c_A* 1be1_A 1fmf_A 1id8_A*
Probab=30.31 E-value=1e+02 Score=23.88 Aligned_cols=71 Identities=8% Similarity=0.039 Sum_probs=34.6
Q ss_pred CHHHHHHHHHcCCCeeecchhchHHHHhhhcCCCCCHHHHHHHHHHHHHhCCCCeEEEeeeeeC-C-CCHHHHHHHHHHH
Q 018731 195 DLRAVETLVHSGLDVFAHNIETVKRLQRIVRDPRAGYEQSLEVLKHAKLSKKGLITKSSIMLGL-G-ESDDDLKEAMADL 272 (351)
Q Consensus 195 ~~e~l~~L~~aG~~~i~~~ies~~~~~~~~r~~~~~~~~~l~~i~~~~~~~~Gi~v~~~~IvGl-g-Et~e~~~~~l~~l 272 (351)
.++.++..++.+.+.|.++.-. ..+.....+.++.+++ .|+. ..-+++|= . -..+++.+.-+.+
T Consensus 43 ~e~~v~~a~~~~~d~v~lS~~~-----------~~~~~~~~~~i~~l~~--~g~~-~i~v~vGG~~~~~~~~~~~~~~~~ 108 (137)
T 1ccw_A 43 QELFIKAAIETKADAILVSSLY-----------GQGEIDCKGLRQKCDE--AGLE-GILLYVGGNIVVGKQHWPDVEKRF 108 (137)
T ss_dssp HHHHHHHHHHHTCSEEEEEECS-----------STHHHHHTTHHHHHHH--TTCT-TCEEEEEESCSSSSCCHHHHHHHH
T ss_pred HHHHHHHHHhcCCCEEEEEecC-----------cCcHHHHHHHHHHHHh--cCCC-CCEEEEECCCcCchHhhhhhHHHH
Confidence 3566677777777777654211 1122223344555555 4542 12234431 1 1123444455667
Q ss_pred HhCCCCE
Q 018731 273 RSIDVDI 279 (351)
Q Consensus 273 ~~lg~d~ 279 (351)
+++|+|.
T Consensus 109 ~~~G~d~ 115 (137)
T 1ccw_A 109 KDMGYDR 115 (137)
T ss_dssp HHTTCSE
T ss_pred HHCCCCE
Confidence 7788774
No 496
>1gox_A (S)-2-hydroxy-acid oxidase, peroxisomal; oxidoreductase (oxygen(A)); HET: FMN; 2.00A {Spinacia oleracea} SCOP: c.1.4.1 PDB: 1gyl_A* 1al8_A* 1al7_A* 2cdh_0
Probab=30.01 E-value=72 Score=29.43 Aligned_cols=72 Identities=11% Similarity=-0.008 Sum_probs=42.3
Q ss_pred HHHHHHHhCCCcEEEEeccCCCCCCCCcHHHHHHHHHHHHHhCC-CcEEEEeecCCCCCHHHHHHHHHcCCCeeecc
Q 018731 138 NTAKAIASWGVDYIVLTSVDRDDIPDGGSGHFARTVKAMKKQKP-DIMVECLTSDFRGDLRAVETLVHSGLDVFAHN 213 (351)
Q Consensus 138 ~~~~~~~~~G~~~I~ltgg~~~~l~~~~~~~~~~li~~ik~~~p-~i~i~~~~~~~~~~~e~l~~L~~aG~~~i~~~ 213 (351)
+.++.+.+.|++.|.+++.....+.. + .-..+.+..+++..+ ++.| ...++..+.+.+..+..+|.+.+.++
T Consensus 237 e~a~~a~~~Gad~I~vs~~ggr~~~~-~-~~~~~~l~~v~~~~~~~ipv--ia~GGI~~~~D~~k~l~~GAdaV~iG 309 (370)
T 1gox_A 237 EDARLAVQHGAAGIIVSNHGARQLDY-V-PATIMALEEVVKAAQGRIPV--FLDGGVRRGTDVFKALALGAAGVFIG 309 (370)
T ss_dssp HHHHHHHHTTCSEEEECCGGGTSSTT-C-CCHHHHHHHHHHHTTTSSCE--EEESSCCSHHHHHHHHHHTCSEEEEC
T ss_pred HHHHHHHHcCCCEEEECCCCCccCCC-c-ccHHHHHHHHHHHhCCCCEE--EEECCCCCHHHHHHHHHcCCCEEeec
Confidence 45566778899999984321111211 1 123455566665443 3444 33455567766666667999999886
No 497
>4gqr_A Pancreatic alpha-amylase; glycosyl hydrolase, diabetes, obesity, digestion, glycosidas inhibition, flavonol, drug design; HET: NAG MYC; 1.20A {Homo sapiens} PDB: 1cpu_A* 1bsi_A 1u2y_A* 1u30_A* 1u33_A* 1xcw_A* 1xcx_A* 1xd0_A* 1xd1_A* 2qmk_A* 2qv4_A* 3bai_A* 3baj_A* 3baw_A* 3ij7_A* 1hny_A* 3ij9_A* 3ij8_A* 4gqq_A* 1kgw_A* ...
Probab=30.00 E-value=32 Score=32.53 Aligned_cols=29 Identities=3% Similarity=0.047 Sum_probs=26.5
Q ss_pred CCCHHHHHHHHHHHHHhCCCCeEEEeeeeeC
Q 018731 228 RAGYEQSLEVLKHAKLSKKGLITKSSIMLGL 258 (351)
Q Consensus 228 ~~~~~~~l~~i~~~~~~~~Gi~v~~~~IvGl 258 (351)
-.+.++..+.++.+++ .||+|-.++++.+
T Consensus 73 ~Gt~~df~~lv~~aH~--~Gi~VilD~V~NH 101 (496)
T 4gqr_A 73 SGNEDEFRNMVTRCNN--VGVRIYVDAVINH 101 (496)
T ss_dssp TBCHHHHHHHHHHHHH--TTCEEEEEECCSE
T ss_pred CCCHHHHHHHHHHHHH--CCCEEEEEEccCc
Confidence 3589999999999999 9999999999877
No 498
>4aef_A Neopullulanase (alpha-amylase II); hydrolase, thermostability, high temperature; 2.34A {Pyrococcus furiosus}
Probab=29.93 E-value=57 Score=32.54 Aligned_cols=72 Identities=10% Similarity=0.068 Sum_probs=45.4
Q ss_pred HHHHHHHHcCCCeeecch--hchHH-----H-HhhhcCCCCCHHHHHHHHHHHHHhCCCCeEEEeeeeeC-CCCHHHHHH
Q 018731 197 RAVETLVHSGLDVFAHNI--ETVKR-----L-QRIVRDPRAGYEQSLEVLKHAKLSKKGLITKSSIMLGL-GESDDDLKE 267 (351)
Q Consensus 197 e~l~~L~~aG~~~i~~~i--es~~~-----~-~~~~r~~~~~~~~~l~~i~~~~~~~~Gi~v~~~~IvGl-gEt~e~~~~ 267 (351)
+.|+.|++.|++.|.+.. ++... . +..+...=.+.++..+.++.+|+ .||+|-.++++.+ +..-.-+.+
T Consensus 243 ~kLdYLk~LGvt~I~L~Pif~s~~~~GYd~~dy~~idp~~Gt~~df~~LV~~aH~--~GI~VIlD~V~NHts~~h~wf~~ 320 (645)
T 4aef_A 243 EKIDHLVNLGINAIYLTPIFSSLTYHGYDIVDYFHVARRLGGDRAFVDLLSELKR--FDIKVILDGVFHHTSFFHPYFQD 320 (645)
T ss_dssp HTHHHHHHHTCCEEEECCCEEESSTTCSSEEEEEEECGGGTCHHHHHHHHHHHHH--TTCEEEEEECCSBCCTTSHHHHH
T ss_pred HhhHHHHHcCCCEEEECCCCCCCCCCCcCccCCCccCcccCCHHHHHHHHHHhhh--cCCEEEEEecccccccCCchhhh
Confidence 456667777777766531 22110 0 11111012488999999999999 9999999999988 655444554
Q ss_pred HHH
Q 018731 268 AMA 270 (351)
Q Consensus 268 ~l~ 270 (351)
.+.
T Consensus 321 ~~~ 323 (645)
T 4aef_A 321 VVR 323 (645)
T ss_dssp HHH
T ss_pred Hhh
Confidence 443
No 499
>2hsa_B 12-oxophytodienoate reductase 3; alpha beta 8 barrel, flavoprotein, jasmonate biosynthesis, oxidoreductase; HET: FMN; 1.50A {Solanum lycopersicum} PDB: 2hs6_A* 3hgs_A* 2hs8_A* 3hgo_A* 1q45_A* 2g5w_A* 2q3o_A*
Probab=29.93 E-value=2.5e+02 Score=26.13 Aligned_cols=77 Identities=12% Similarity=-0.007 Sum_probs=50.2
Q ss_pred chhHHHHHHHHHhCC------CcEEEEeccCCCCCCCCc-----HH-HHHHHHHHHHHhCCCcEEEEeecCCCCCHHHHH
Q 018731 133 PMEPENTAKAIASWG------VDYIVLTSVDRDDIPDGG-----SG-HFARTVKAMKKQKPDIMVECLTSDFRGDLRAVE 200 (351)
Q Consensus 133 ~eei~~~~~~~~~~G------~~~I~ltgg~~~~l~~~~-----~~-~~~~li~~ik~~~p~i~i~~~~~~~~~~~e~l~ 200 (351)
.++..+.++.+.+.| +..|.+.++......... .. ...++++.+++.. ++.|- .++.. +.+.++
T Consensus 259 ~~~~~~la~~le~~G~~gg~~vd~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~vk~~~-~iPvi--~~G~i-~~~~a~ 334 (402)
T 2hsa_B 259 LSLGLAVVERLNKIQLHSGSKLAYLHVTQPRYVAYGQTEAGRLGSEEEEARLMRTLRNAY-QGTFI--CSGGY-TRELGI 334 (402)
T ss_dssp HHHHHHHHHHHHHHHHHHTSCCSEEEEECCCCCTTTTSSSTTTTHHHHHHHHHHHHHHHC-SSCEE--EESSC-CHHHHH
T ss_pred HHHHHHHHHHHHhcCCccCCceEEEEEecCccccccCCccccccCCcchHHHHHHHHHHC-CCCEE--EeCCC-CHHHHH
Confidence 356778888888889 999999876432100000 01 2357778888875 34443 24454 888888
Q ss_pred HHHHcC-CCeeecc
Q 018731 201 TLVHSG-LDVFAHN 213 (351)
Q Consensus 201 ~L~~aG-~~~i~~~ 213 (351)
.+.+.| +|.|.++
T Consensus 335 ~~l~~g~aD~V~ig 348 (402)
T 2hsa_B 335 EAVAQGDADLVSYG 348 (402)
T ss_dssp HHHHTTSCSEEEES
T ss_pred HHHHCCCCceeeec
Confidence 888877 9999876
No 500
>3r8r_A Transaldolase; pentose phosphate pathway, schiff bases; 1.90A {Bacillus subtilis}
Probab=29.88 E-value=1.3e+02 Score=25.43 Aligned_cols=115 Identities=8% Similarity=0.056 Sum_probs=61.9
Q ss_pred HHHHHHHHHHHhCCC-cEEEEeecCCCCCHH---HHHHHHHcCCCeeecchhchHHHHhhhcCCCCCHHHHHHHHHHHHH
Q 018731 168 HFARTVKAMKKQKPD-IMVECLTSDFRGDLR---AVETLVHSGLDVFAHNIETVKRLQRIVRDPRAGYEQSLEVLKHAKL 243 (351)
Q Consensus 168 ~~~~li~~ik~~~p~-i~i~~~~~~~~~~~e---~l~~L~~aG~~~i~~~ies~~~~~~~~r~~~~~~~~~l~~i~~~~~ 243 (351)
.+.+++++|.+..++ +.+++...+ .++ ..+.|.+.+-+ +.+ +- ..++ +-+++++.+.+
T Consensus 39 ~~~~~~~eI~~~v~G~Vs~EV~a~d---~e~mi~ea~~l~~~~~n-v~I------------KI-P~T~-eGl~A~~~L~~ 100 (212)
T 3r8r_A 39 SFHDRLREITDVVKGSVSAEVISLK---AEEMIEEGKELAKIAPN-ITV------------KI-PMTS-DGLKAVRALTD 100 (212)
T ss_dssp CHHHHHHHHHHHCCSCEEEECCCSS---HHHHHHHHHHHHTTCTT-EEE------------EE-ESSH-HHHHHHHHHHH
T ss_pred CHHHHHHHHHHhcCCCEEEEEecCC---HHHHHHHHHHHHHhCCC-EEE------------Ee-CCCH-HHHHHHHHHHH
Confidence 466777777777665 455553222 233 33444444321 211 10 1244 56788888888
Q ss_pred hCCCCeEEEeeeeeCCCCHHHHHHHHHHHHhCCCCEEeeeccc-CCCCCcccccCCCCHHHHHHHHHHHHhcCcc
Q 018731 244 SKKGLITKSSIMLGLGESDDDLKEAMADLRSIDVDILTLGQYL-QPTPLHLTVKEYVTPEKFDFWKAYGESIGFR 317 (351)
Q Consensus 244 ~~~Gi~v~~~~IvGlgEt~e~~~~~l~~l~~lg~d~i~i~~~l-~PTp~~~~~~~~v~~~e~~~~~~~~~~~G~~ 317 (351)
.||.++.+.++.+ .+.. ...+.|++.++. |. |-. ....-.-+...++.++....|+.
T Consensus 101 --~GI~vn~TlifS~----~Qa~----~Aa~AGa~yISP--fvgRi~-----d~~~dG~~~v~~i~~~~~~~~~~ 158 (212)
T 3r8r_A 101 --LGIKTNVTLIFNA----NQAL----LAARAGATYVSP--FLGRLD-----DIGHNGLDLISEVKQIFDIHGLD 158 (212)
T ss_dssp --TTCCEEEEEECSH----HHHH----HHHHHTCSEEEE--BHHHHH-----HTTSCHHHHHHHHHHHHHHHTCC
T ss_pred --CCCcEEEEEeCCH----HHHH----HHHHcCCeEEEe--ccchhh-----hcCCChHHHHHHHHHHHHHcCCC
Confidence 8999999999853 3332 244578887765 43 110 01111123455566666666664
Done!