Query 018732
Match_columns 351
No_of_seqs 136 out of 1534
Neff 7.7
Searched_HMMs 13730
Date Mon Mar 25 05:12:45 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/018732.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/018732hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d2yvxa3 f.57.1.1 (A:276-448) M 11.9 2E+02 0.015 21.8 6.0 24 43-66 117-140 (173)
2 d1ayia_ a.28.2.1 (A:) ImmE7 pr 8.3 62 0.0045 22.0 1.2 12 13-24 53-64 (86)
3 d2bs2c1 f.21.2.1 (C:1-254) Fum 8.1 2.7E+02 0.02 22.2 5.7 65 72-137 22-96 (254)
4 d1gxha_ a.28.2.1 (A:) ImmE8 (I 8.1 67 0.0048 21.8 1.3 12 13-24 51-62 (85)
5 d1v54l_ f.23.6.1 (L:) Mitochon 7.4 1.4E+02 0.01 17.5 2.4 23 40-64 17-39 (46)
6 d2vlqa1 a.28.2.1 (A:4-84) ImmE 7.1 76 0.0055 21.3 1.2 12 13-24 49-60 (81)
7 d1lu0a_ g.3.2.1 (A:) Trypsin i 5.8 1.1E+02 0.0078 16.2 1.1 10 22-31 18-27 (29)
8 d1ppjd2 f.23.11.1 (D:196-241) 5.3 1.6E+02 0.012 17.3 1.8 17 34-50 4-20 (46)
9 d1ahla_ g.9.1.1 (A:) Anthopleu 5.1 1.1E+02 0.0081 18.3 1.0 10 23-32 3-12 (49)
10 d2sh1a_ g.9.1.1 (A:) Sea anemo 4.9 96 0.007 18.5 0.6 10 23-32 2-11 (48)
No 1
>d2yvxa3 f.57.1.1 (A:276-448) Mg2+ transporter MgtE {Thermus thermophilus [TaxId: 274]}
Probab=11.85 E-value=2e+02 Score=21.76 Aligned_cols=24 Identities=21% Similarity=0.533 Sum_probs=15.0
Q ss_pred HHHHHHHHHHHHHHcHHhhhcccc
Q 018732 43 LAAIATILVAGALGVSLPLLGKKI 66 (351)
Q Consensus 43 i~~~~~i~~~sllg~~lP~~~~~~ 66 (351)
+...+.+.+++++|..+|++.+|.
T Consensus 117 ~sl~~~~~ia~~~G~~lPlll~kl 140 (173)
T d2yvxa3 117 VSLVLIVFFANLVGAMLPFLLRRL 140 (173)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHh
Confidence 334444666777777777766654
No 2
>d1ayia_ a.28.2.1 (A:) ImmE7 protein (Im7) {Escherichia coli [TaxId: 562]}
Probab=8.29 E-value=62 Score=22.04 Aligned_cols=12 Identities=50% Similarity=1.043 Sum_probs=8.7
Q ss_pred HHhccccccCCc
Q 018732 13 LLYYPSTVRGEC 24 (351)
Q Consensus 13 ~~~~~~~~~~~~ 24 (351)
|+|||..++-+|
T Consensus 53 LIyYP~~~~eds 64 (86)
T d1ayia_ 53 LIYYPSDNRDDS 64 (86)
T ss_dssp HHHSCCTTSCCS
T ss_pred eeeeCCCCCCCC
Confidence 789998865544
No 3
>d2bs2c1 f.21.2.1 (C:1-254) Fumarate reductase respiratory complex cytochrome b subunit, FrdC {Wolinella succinogenes [TaxId: 844]}
Probab=8.06 E-value=2.7e+02 Score=22.23 Aligned_cols=65 Identities=8% Similarity=-0.044 Sum_probs=39.2
Q ss_pred CchHHHHHHHhhhhHHHHhhHHhcc--------HhhHHhccCCCCCCC--CCCCCcHHHHHHHHHHHHHHHHHHHH
Q 018732 72 ENDVFFMVKAFAAGVILATGFVHIL--------PEAFDSLTSPCLGEN--PWGNFPFTGLVAMMSAIGTLMIDSFA 137 (351)
Q Consensus 72 ~~~~l~~l~~fa~GvlL~~aflhLL--------Pea~e~~~~~~~~~~--~~~~~P~~~~~~~~Gf~l~~llE~~~ 137 (351)
.+-.+..+.+++|=++..-.+.||+ ||+++...+. .+.. .....|+...+..++++..+++--..
T Consensus 22 ~~~~l~~l~slTGlvL~lFl~~Hm~~n~~il~g~eafn~~a~~-l~~~~~~~~~~p~l~~i~~~~l~~~ll~H~~~ 96 (254)
T d2bs2c1 22 MPAKLDWWQSATGLFLGLFMIGHMFFVSTILLGDNVMLWVTKK-FELDFIFEGGKPIVVSFLAAFVFAVFIAHAFL 96 (254)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHGGGGTCHHHHHHHHHH-TTCTTTSSSCCTHHHHHHHHHHHHHHHHHHHH
T ss_pred CcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHH-HHhcccccCCccHHHHHHHHHHHHHHHHHHHH
Confidence 3556778888888787777888887 6666655431 1111 12345766666666666666665443
No 4
>d1gxha_ a.28.2.1 (A:) ImmE8 (Im8) {Escherichia coli [TaxId: 562]}
Probab=8.05 E-value=67 Score=21.83 Aligned_cols=12 Identities=33% Similarity=0.739 Sum_probs=8.9
Q ss_pred HHhccccccCCc
Q 018732 13 LLYYPSTVRGEC 24 (351)
Q Consensus 13 ~~~~~~~~~~~~ 24 (351)
|+|||..++-++
T Consensus 51 LIfYP~~~~eds 62 (85)
T d1gxha_ 51 LIYYPEGNNDGS 62 (85)
T ss_dssp HHHSCCSSCSSC
T ss_pred eeeeCCCCCCCC
Confidence 789998876553
No 5
>d1v54l_ f.23.6.1 (L:) Mitochondrial cytochrome c oxidase subunit VIIc (aka VIIIa) {Cow (Bos taurus) [TaxId: 9913]}
Probab=7.36 E-value=1.4e+02 Score=17.46 Aligned_cols=23 Identities=22% Similarity=0.465 Sum_probs=16.5
Q ss_pred hHHHHHHHHHHHHHHHHcHHhhhcc
Q 018732 40 KFKLAAIATILVAGALGVSLPLLGK 64 (351)
Q Consensus 40 ~~ki~~~~~i~~~sllg~~lP~~~~ 64 (351)
-.|+.+++++++++-++ .|+++.
T Consensus 17 k~rLla~m~~~fGsgfa--~PF~iv 39 (46)
T d1v54l_ 17 KWRLLAMMTLFFGSGFA--APFFIV 39 (46)
T ss_dssp HHHHHHHHHHHHHHHHH--HHHHHH
T ss_pred HHHHHHHHHHHHhcccc--chHHHH
Confidence 46778888888887666 586543
No 6
>d2vlqa1 a.28.2.1 (A:4-84) ImmE9 protein (Im9) {Escherichia coli [TaxId: 562]}
Probab=7.13 E-value=76 Score=21.32 Aligned_cols=12 Identities=33% Similarity=0.814 Sum_probs=8.4
Q ss_pred HHhccccccCCc
Q 018732 13 LLYYPSTVRGEC 24 (351)
Q Consensus 13 ~~~~~~~~~~~~ 24 (351)
|+|||..++.++
T Consensus 49 LIfYP~~~~eds 60 (81)
T d2vlqa1 49 LIYYPKEGDDDS 60 (81)
T ss_dssp HHHSCCTTCCCS
T ss_pred eeeeCCCCCcCC
Confidence 789998765443
No 7
>d1lu0a_ g.3.2.1 (A:) Trypsin inhibitor {Squash (Cucurbita maxima) [TaxId: 3661]}
Probab=5.84 E-value=1.1e+02 Score=16.17 Aligned_cols=10 Identities=30% Similarity=0.660 Sum_probs=6.8
Q ss_pred CCcccCCCcc
Q 018732 22 GECTCDVEDT 31 (351)
Q Consensus 22 ~~~~~~~~~~ 31 (351)
.+|+|.+.|.
T Consensus 18 a~CvC~~~G~ 27 (29)
T d1lu0a_ 18 AECVCLEHGY 27 (29)
T ss_dssp TTCCBCTTSB
T ss_pred hhceeccccc
Confidence 4678877664
No 8
>d1ppjd2 f.23.11.1 (D:196-241) Cytochrome c1 subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase), transmembrane anchor {Cow (Bos taurus) [TaxId: 9913]}
Probab=5.28 E-value=1.6e+02 Score=17.32 Aligned_cols=17 Identities=12% Similarity=0.350 Sum_probs=9.8
Q ss_pred cccchhhHHHHHHHHHH
Q 018732 34 NNGEALKFKLAAIATIL 50 (351)
Q Consensus 34 ~~~~~l~~ki~~~~~i~ 50 (351)
|+-+.+++|++..+.++
T Consensus 4 d~RK~mG~Kv~~~l~~l 20 (46)
T d1ppjd2 4 DHRKRMGLKMLLMMGLL 20 (46)
T ss_dssp HHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 33356777776655543
No 9
>d1ahla_ g.9.1.1 (A:) Anthopleurin-A {Giant green sea anemone (Anthopleura xanthogrammica) [TaxId: 6112]}
Probab=5.07 E-value=1.1e+02 Score=18.29 Aligned_cols=10 Identities=30% Similarity=0.956 Sum_probs=7.0
Q ss_pred CcccCCCccc
Q 018732 23 ECTCDVEDTE 32 (351)
Q Consensus 23 ~~~~~~~~~~ 32 (351)
.|-|++|++.
T Consensus 3 ~C~CdsDGP~ 12 (49)
T d1ahla_ 3 SCLCDSDGPS 12 (49)
T ss_dssp CCCCTTCSSS
T ss_pred cccccCCCCC
Confidence 5778877754
No 10
>d2sh1a_ g.9.1.1 (A:) Sea anemone neurotoxin-1 {Sea anemone (Stichodactyla helianthus) [TaxId: 6123]}
Probab=4.90 E-value=96 Score=18.53 Aligned_cols=10 Identities=40% Similarity=1.046 Sum_probs=6.9
Q ss_pred CcccCCCccc
Q 018732 23 ECTCDVEDTE 32 (351)
Q Consensus 23 ~~~~~~~~~~ 32 (351)
.|-|++||++
T Consensus 2 aC~CdsDGP~ 11 (48)
T d2sh1a_ 2 ACKCDDEGPD 11 (48)
T ss_dssp EEECSCCSSS
T ss_pred cccccCCCCC
Confidence 3778877755
Done!