Query 018740
Match_columns 351
No_of_seqs 377 out of 3611
Neff 9.0
Searched_HMMs 29240
Date Mon Mar 25 05:20:06 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/018740.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/018740hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4e2x_A TCAB9; kijanose, tetron 99.9 1.7E-25 5.7E-30 214.9 12.5 171 164-348 94-268 (416)
2 4gek_A TRNA (CMO5U34)-methyltr 99.9 3.9E-23 1.3E-27 185.9 20.5 171 176-350 69-259 (261)
3 3dtn_A Putative methyltransfer 99.9 1.2E-22 3.9E-27 179.5 21.1 181 164-350 30-228 (234)
4 3dh0_A SAM dependent methyltra 99.9 1E-22 3.6E-27 177.9 20.4 166 167-349 27-194 (219)
5 1vl5_A Unknown conserved prote 99.9 5.1E-23 1.7E-27 184.9 17.7 162 166-336 26-189 (260)
6 3dlc_A Putative S-adenosyl-L-m 99.9 1.1E-22 3.9E-27 177.1 18.9 178 164-350 31-216 (219)
7 3hnr_A Probable methyltransfer 99.9 4.1E-23 1.4E-27 180.6 15.3 171 169-349 37-213 (220)
8 3bus_A REBM, methyltransferase 99.9 1.2E-21 4.1E-26 177.0 22.4 167 166-337 50-216 (273)
9 1xxl_A YCGJ protein; structura 99.9 6.6E-22 2.3E-26 175.5 19.7 161 167-336 11-173 (239)
10 2o57_A Putative sarcosine dime 99.9 2.3E-21 7.7E-26 177.5 23.3 164 165-336 66-233 (297)
11 3ujc_A Phosphoethanolamine N-m 99.9 1E-21 3.5E-26 176.4 20.0 163 163-336 41-205 (266)
12 1nkv_A Hypothetical protein YJ 99.9 1.2E-21 4.2E-26 175.2 19.3 164 163-335 22-185 (256)
13 3f4k_A Putative methyltransfer 99.9 5E-21 1.7E-25 171.3 21.9 165 162-336 30-195 (257)
14 3kkz_A Uncharacterized protein 99.9 3.6E-21 1.2E-25 173.5 21.1 164 163-336 31-195 (267)
15 3vc1_A Geranyl diphosphate 2-C 99.9 5.4E-21 1.9E-25 176.4 21.6 162 166-337 105-269 (312)
16 3mgg_A Methyltransferase; NYSG 99.9 2.8E-21 9.7E-26 174.9 19.4 167 167-336 27-197 (276)
17 1p91_A Ribosomal RNA large sub 99.9 1.6E-21 5.3E-26 176.0 17.3 176 72-289 3-182 (269)
18 2p7i_A Hypothetical protein; p 99.9 3.9E-21 1.3E-25 170.7 18.0 146 177-335 42-197 (250)
19 3l8d_A Methyltransferase; stru 99.9 3.8E-21 1.3E-25 170.5 17.9 156 165-335 43-198 (242)
20 3ccf_A Cyclopropane-fatty-acyl 99.9 1.7E-21 5.9E-26 176.8 15.3 154 168-335 48-208 (279)
21 3h2b_A SAM-dependent methyltra 99.9 2.3E-21 7.9E-26 167.4 15.0 138 178-336 42-181 (203)
22 4htf_A S-adenosylmethionine-de 99.9 2.8E-21 9.7E-26 175.9 15.3 162 169-335 61-230 (285)
23 3ocj_A Putative exported prote 99.9 8.2E-21 2.8E-25 174.7 18.3 171 176-349 117-305 (305)
24 3g5l_A Putative S-adenosylmeth 99.9 9.2E-21 3.1E-25 169.3 18.1 162 167-335 34-214 (253)
25 3i9f_A Putative type 11 methyl 99.9 2E-21 6.8E-26 163.0 12.8 147 173-348 13-160 (170)
26 2p35_A Trans-aconitate 2-methy 99.9 1.8E-20 6.3E-25 167.7 19.5 156 167-332 23-185 (259)
27 3jwh_A HEN1; methyltransferase 99.9 4.4E-21 1.5E-25 167.5 14.9 161 167-333 19-188 (217)
28 3e23_A Uncharacterized protein 99.9 9.1E-21 3.1E-25 164.7 16.3 159 166-350 34-204 (211)
29 3ou2_A SAM-dependent methyltra 99.9 1.3E-20 4.5E-25 164.1 17.3 167 169-346 37-214 (218)
30 3mcz_A O-methyltransferase; ad 99.9 4.3E-20 1.5E-24 173.2 21.8 178 168-350 169-351 (352)
31 1y8c_A S-adenosylmethionine-de 99.9 3.9E-21 1.3E-25 170.5 13.5 166 177-349 37-246 (246)
32 3jwg_A HEN1, methyltransferase 99.9 5.6E-21 1.9E-25 167.0 13.6 161 167-333 19-188 (219)
33 3sm3_A SAM-dependent methyltra 99.8 2.5E-20 8.7E-25 164.0 17.4 160 169-335 24-205 (235)
34 3gu3_A Methyltransferase; alph 99.8 3E-20 1E-24 169.2 18.2 165 168-337 12-190 (284)
35 2yqz_A Hypothetical protein TT 99.8 2.1E-20 7.3E-25 167.6 16.7 154 174-334 36-193 (263)
36 1pjz_A Thiopurine S-methyltran 99.8 8.7E-21 3E-25 164.3 13.5 148 170-335 15-174 (203)
37 1kpg_A CFA synthase;, cyclopro 99.8 6E-20 2.1E-24 167.2 19.7 166 166-337 53-228 (287)
38 3ege_A Putative methyltransfer 99.8 1.1E-20 3.6E-25 170.0 14.1 155 164-336 21-177 (261)
39 3hem_A Cyclopropane-fatty-acyl 99.8 5.9E-20 2E-24 168.6 19.3 167 166-338 61-244 (302)
40 3dli_A Methyltransferase; PSI- 99.8 2.5E-20 8.4E-25 165.4 15.7 152 166-338 29-185 (240)
41 2xvm_A Tellurite resistance pr 99.8 7.6E-20 2.6E-24 156.9 18.3 147 168-335 23-171 (199)
42 3pfg_A N-methyltransferase; N, 99.8 1.9E-20 6.6E-25 168.3 15.1 171 167-350 42-251 (263)
43 2aot_A HMT, histamine N-methyl 99.8 2.4E-20 8.4E-25 170.4 16.0 152 176-334 51-218 (292)
44 1xtp_A LMAJ004091AAA; SGPP, st 99.8 1.7E-20 5.7E-25 167.5 14.2 154 167-337 83-238 (254)
45 1x19_A CRTF-related protein; m 99.8 1.9E-19 6.6E-24 169.3 22.0 176 166-348 179-359 (359)
46 3bkw_A MLL3908 protein, S-aden 99.8 5.3E-20 1.8E-24 163.0 17.1 162 168-336 34-213 (243)
47 2r3s_A Uncharacterized protein 99.8 2.5E-19 8.6E-24 166.7 22.3 177 167-348 153-335 (335)
48 4hg2_A Methyltransferase type 99.8 1.5E-20 5.3E-25 168.4 13.0 114 162-289 26-139 (257)
49 3lcc_A Putative methyl chlorid 99.8 4.4E-20 1.5E-24 163.2 15.7 138 178-336 67-206 (235)
50 3gwz_A MMCR; methyltransferase 99.8 7E-19 2.4E-23 166.1 23.8 174 166-347 191-368 (369)
51 4fsd_A Arsenic methyltransfera 99.8 1.2E-19 4.2E-24 172.1 17.5 157 175-335 81-249 (383)
52 1vlm_A SAM-dependent methyltra 99.8 2.6E-19 8.8E-24 156.6 18.0 137 178-335 48-186 (219)
53 2ex4_A Adrenal gland protein A 99.8 5.2E-20 1.8E-24 163.4 13.7 144 177-336 79-224 (241)
54 3i53_A O-methyltransferase; CO 99.8 4.7E-19 1.6E-23 164.9 20.6 167 171-347 163-331 (332)
55 3bkx_A SAM-dependent methyltra 99.8 2.5E-19 8.7E-24 161.8 18.3 167 167-335 33-217 (275)
56 2gs9_A Hypothetical protein TT 99.8 2.2E-19 7.5E-24 155.9 16.7 140 168-328 29-171 (211)
57 2a14_A Indolethylamine N-methy 99.8 2.6E-20 8.8E-25 167.8 11.0 164 174-349 52-261 (263)
58 2fk8_A Methoxy mycolic acid sy 99.8 2.5E-19 8.7E-24 165.5 17.4 164 166-336 79-253 (318)
59 3d2l_A SAM-dependent methyltra 99.8 3.4E-19 1.2E-23 157.8 17.4 174 165-348 23-243 (243)
60 3thr_A Glycine N-methyltransfe 99.8 3E-19 1E-23 162.9 17.5 124 163-288 43-178 (293)
61 2gb4_A Thiopurine S-methyltran 99.8 3.7E-19 1.3E-23 159.1 17.7 151 167-335 58-225 (252)
62 1ve3_A Hypothetical protein PH 99.8 5.8E-19 2E-23 154.7 18.4 166 166-340 29-218 (227)
63 3g5t_A Trans-aconitate 3-methy 99.8 5.4E-19 1.8E-23 162.0 18.9 165 162-329 22-196 (299)
64 3g2m_A PCZA361.24; SAM-depende 99.8 4.2E-19 1.4E-23 162.7 18.0 176 165-348 71-292 (299)
65 3bxo_A N,N-dimethyltransferase 99.8 1.7E-19 5.9E-24 159.3 14.6 169 167-348 32-239 (239)
66 1qzz_A RDMB, aclacinomycin-10- 99.8 1.2E-18 4.2E-23 164.5 20.9 176 167-349 172-357 (374)
67 2i62_A Nicotinamide N-methyltr 99.8 1.4E-19 4.7E-24 162.4 13.6 165 174-350 53-263 (265)
68 1tw3_A COMT, carminomycin 4-O- 99.8 1.4E-18 5E-23 163.3 21.0 177 167-350 173-358 (360)
69 3e8s_A Putative SAM dependent 99.8 1.7E-19 5.8E-24 157.7 13.7 168 168-348 43-227 (227)
70 3cc8_A Putative methyltransfer 99.8 5.5E-19 1.9E-23 154.8 16.4 152 168-336 24-184 (230)
71 4a6d_A Hydroxyindole O-methylt 99.8 2.9E-18 1E-22 160.8 21.0 176 167-349 169-347 (353)
72 2ip2_A Probable phenazine-spec 99.8 1.5E-18 5E-23 161.6 18.7 174 166-347 157-333 (334)
73 3dp7_A SAM-dependent methyltra 99.8 8.3E-19 2.8E-23 165.2 17.2 167 177-347 179-354 (363)
74 3cgg_A SAM-dependent methyltra 99.8 3.1E-18 1.1E-22 146.0 19.0 138 177-348 46-195 (195)
75 3g07_A 7SK snRNA methylphospha 99.8 1.1E-19 3.6E-24 166.3 9.8 153 177-335 46-267 (292)
76 2kw5_A SLR1183 protein; struct 99.8 1.3E-19 4.6E-24 156.2 9.8 135 180-334 32-168 (202)
77 3reo_A (ISO)eugenol O-methyltr 99.8 6.6E-18 2.3E-22 159.3 21.1 169 167-348 192-367 (368)
78 2qe6_A Uncharacterized protein 99.8 3.8E-18 1.3E-22 154.5 18.0 146 177-333 77-238 (274)
79 3m70_A Tellurite resistance pr 99.8 2E-18 7E-23 157.0 16.1 136 177-334 120-257 (286)
80 2g72_A Phenylethanolamine N-me 99.8 6.1E-19 2.1E-23 160.8 12.3 147 177-335 71-254 (289)
81 2p8j_A S-adenosylmethionine-de 99.8 8.4E-19 2.9E-23 151.8 12.3 152 176-333 22-179 (209)
82 1wzn_A SAM-dependent methyltra 99.8 7.8E-18 2.7E-22 150.1 19.0 173 169-349 33-251 (252)
83 3lst_A CALO1 methyltransferase 99.8 2.1E-18 7.3E-23 161.5 16.0 170 167-346 174-346 (348)
84 1fp1_D Isoliquiritigenin 2'-O- 99.8 5.8E-18 2E-22 160.0 18.4 166 168-347 199-372 (372)
85 3ofk_A Nodulation protein S; N 99.8 1.7E-18 5.9E-23 150.7 12.8 113 167-287 41-156 (216)
86 3p9c_A Caffeic acid O-methyltr 99.8 2E-17 6.7E-22 155.8 20.7 168 167-347 190-364 (364)
87 1ri5_A MRNA capping enzyme; me 99.8 4.2E-18 1.4E-22 155.4 15.1 152 176-336 63-249 (298)
88 3e05_A Precorrin-6Y C5,15-meth 99.8 2.4E-17 8.3E-22 142.3 19.0 135 163-329 26-160 (204)
89 1fbn_A MJ fibrillarin homologu 99.8 3.7E-17 1.3E-21 144.0 19.3 152 170-349 67-229 (230)
90 2vdw_A Vaccinia virus capping 99.8 1.1E-18 3.7E-23 160.2 8.2 159 177-337 48-246 (302)
91 3ggd_A SAM-dependent methyltra 99.8 6.5E-18 2.2E-22 150.0 12.7 146 175-334 54-216 (245)
92 3grz_A L11 mtase, ribosomal pr 99.7 2.8E-17 9.4E-22 142.0 16.1 139 176-349 59-198 (205)
93 1fp2_A Isoflavone O-methyltran 99.7 2.8E-17 9.7E-22 154.0 17.2 157 176-346 187-351 (352)
94 3htx_A HEN1; HEN1, small RNA m 99.7 1.1E-17 3.9E-22 167.4 14.8 164 165-333 709-894 (950)
95 3njr_A Precorrin-6Y methylase; 99.7 3.4E-16 1.2E-20 135.4 20.2 134 164-333 42-176 (204)
96 3orh_A Guanidinoacetate N-meth 99.7 2E-18 6.9E-23 152.9 6.1 111 168-284 52-169 (236)
97 3mq2_A 16S rRNA methyltransfer 99.7 1.1E-17 3.6E-22 146.1 10.6 153 174-335 24-182 (218)
98 2zfu_A Nucleomethylin, cerebra 99.7 6.3E-17 2.2E-21 140.7 14.4 126 176-349 66-192 (215)
99 1dus_A MJ0882; hypothetical pr 99.7 1.5E-16 5E-21 135.4 16.3 119 164-288 39-160 (194)
100 2pxx_A Uncharacterized protein 99.7 4.5E-17 1.5E-21 141.2 13.2 118 163-288 30-162 (215)
101 3hm2_A Precorrin-6Y C5,15-meth 99.7 1.3E-16 4.3E-21 134.3 15.6 135 166-333 14-149 (178)
102 1zx0_A Guanidinoacetate N-meth 99.7 7.9E-18 2.7E-22 148.9 8.2 107 176-287 59-172 (236)
103 1zg3_A Isoflavanone 4'-O-methy 99.7 7.1E-17 2.4E-21 151.7 15.1 157 177-346 193-357 (358)
104 3m33_A Uncharacterized protein 99.7 8.6E-17 2.9E-21 141.3 13.1 117 176-335 47-165 (226)
105 2ld4_A Anamorsin; methyltransf 99.7 7.9E-17 2.7E-21 135.8 12.3 117 173-329 8-128 (176)
106 3fpf_A Mtnas, putative unchara 99.7 1.5E-16 5.3E-21 143.7 14.9 108 171-286 116-223 (298)
107 2nxc_A L11 mtase, ribosomal pr 99.7 1.6E-16 5.5E-21 142.1 14.9 143 167-347 112-254 (254)
108 1l3i_A Precorrin-6Y methyltran 99.7 2.5E-16 8.6E-21 133.7 15.1 134 163-330 19-153 (192)
109 2b3t_A Protein methyltransfera 99.7 4.1E-16 1.4E-20 141.1 17.4 153 163-347 96-275 (276)
110 3giw_A Protein of unknown func 99.7 1.3E-16 4.5E-21 142.5 13.6 149 177-333 78-243 (277)
111 4df3_A Fibrillarin-like rRNA/T 99.7 5.4E-16 1.8E-20 135.9 17.1 151 172-346 72-230 (233)
112 3q87_B N6 adenine specific DNA 99.7 3.4E-16 1.2E-20 131.4 14.8 116 176-334 22-146 (170)
113 1yb2_A Hypothetical protein TA 99.7 2.6E-16 8.7E-21 142.5 14.9 135 167-335 100-235 (275)
114 2avn_A Ubiquinone/menaquinone 99.7 1.7E-16 5.9E-21 142.3 13.5 153 167-335 46-211 (260)
115 1nt2_A Fibrillarin-like PRE-rR 99.7 8.8E-16 3E-20 133.4 17.5 145 173-347 53-209 (210)
116 1yzh_A TRNA (guanine-N(7)-)-me 99.7 5.7E-16 1.9E-20 134.8 16.4 108 177-287 41-158 (214)
117 1xdz_A Methyltransferase GIDB; 99.7 3.3E-16 1.1E-20 138.9 14.6 129 176-335 69-200 (240)
118 2pwy_A TRNA (adenine-N(1)-)-me 99.7 1.1E-15 3.9E-20 136.4 18.1 138 163-333 82-220 (258)
119 3bgv_A MRNA CAP guanine-N7 met 99.7 3.2E-16 1.1E-20 144.4 14.9 153 177-336 34-231 (313)
120 2yxd_A Probable cobalt-precorr 99.7 1.7E-15 5.8E-20 127.6 18.0 133 163-333 21-153 (183)
121 3evz_A Methyltransferase; NYSG 99.7 1.9E-15 6.4E-20 132.8 18.7 130 175-334 53-203 (230)
122 3p2e_A 16S rRNA methylase; met 99.7 2E-16 6.7E-21 139.0 11.5 153 176-337 23-185 (225)
123 2fca_A TRNA (guanine-N(7)-)-me 99.7 7.7E-16 2.6E-20 134.1 13.8 108 177-287 38-155 (213)
124 3mb5_A SAM-dependent methyltra 99.7 1.2E-15 4E-20 136.3 15.2 137 163-333 79-218 (255)
125 3p9n_A Possible methyltransfer 99.7 5.3E-16 1.8E-20 132.3 12.4 110 176-289 43-157 (189)
126 4dzr_A Protein-(glutamine-N5) 99.7 4.9E-17 1.7E-21 140.8 5.9 153 166-349 18-206 (215)
127 2ipx_A RRNA 2'-O-methyltransfe 99.7 1.6E-15 5.4E-20 133.7 15.4 152 172-348 72-232 (233)
128 3lbf_A Protein-L-isoaspartate 99.7 1.5E-15 5E-20 131.6 14.4 113 164-287 64-176 (210)
129 3iv6_A Putative Zn-dependent a 99.6 8.1E-16 2.8E-20 137.5 12.4 110 166-287 34-150 (261)
130 3mti_A RRNA methylase; SAM-dep 99.6 1.1E-15 3.7E-20 129.7 12.2 107 176-287 21-137 (185)
131 1jsx_A Glucose-inhibited divis 99.6 1.5E-15 5.3E-20 131.0 13.3 100 177-284 65-164 (207)
132 3fzg_A 16S rRNA methylase; met 99.6 1.4E-15 4.9E-20 127.7 11.5 115 163-284 37-151 (200)
133 3lpm_A Putative methyltransfer 99.6 5.7E-15 2E-19 132.3 16.2 151 168-348 39-219 (259)
134 3id6_C Fibrillarin-like rRNA/T 99.6 2.2E-14 7.6E-19 125.9 19.3 157 167-348 63-231 (232)
135 1o54_A SAM-dependent O-methylt 99.6 4.6E-15 1.6E-19 134.3 15.4 136 164-333 99-235 (277)
136 3g89_A Ribosomal RNA small sub 99.6 4.4E-15 1.5E-19 132.3 14.3 130 175-335 78-210 (249)
137 3dxy_A TRNA (guanine-N(7)-)-me 99.6 1.1E-15 3.9E-20 133.5 10.2 108 177-287 34-152 (218)
138 3eey_A Putative rRNA methylase 99.6 3.4E-15 1.2E-19 127.9 12.9 111 176-288 21-142 (197)
139 2b25_A Hypothetical protein; s 99.6 3.1E-15 1E-19 139.3 13.2 120 164-288 92-222 (336)
140 3uwp_A Histone-lysine N-methyl 99.6 1.5E-15 5.2E-20 142.2 10.8 122 165-288 161-291 (438)
141 1g8a_A Fibrillarin-like PRE-rR 99.6 2.8E-14 9.5E-19 125.1 18.2 149 173-347 69-226 (227)
142 3lec_A NADB-rossmann superfami 99.6 2.2E-14 7.5E-19 125.3 17.1 148 166-347 12-163 (230)
143 3ckk_A TRNA (guanine-N(7)-)-me 99.6 2.6E-15 9E-20 132.6 11.5 112 176-287 45-170 (235)
144 1vbf_A 231AA long hypothetical 99.6 8.1E-15 2.8E-19 128.7 13.9 112 164-288 57-168 (231)
145 3bwc_A Spermidine synthase; SA 99.6 4.7E-15 1.6E-19 136.0 12.3 150 176-347 94-257 (304)
146 2fyt_A Protein arginine N-meth 99.6 8.5E-15 2.9E-19 136.5 14.1 112 167-282 54-168 (340)
147 2frn_A Hypothetical protein PH 99.6 3.2E-14 1.1E-18 128.9 16.9 137 167-333 117-253 (278)
148 3dmg_A Probable ribosomal RNA 99.6 7.6E-15 2.6E-19 138.6 13.1 116 166-287 220-342 (381)
149 1dl5_A Protein-L-isoaspartate 99.6 1.1E-14 3.8E-19 134.4 13.7 114 165-287 63-177 (317)
150 2yxe_A Protein-L-isoaspartate 99.6 1.5E-14 5.1E-19 125.6 13.8 113 166-287 66-179 (215)
151 2ift_A Putative methylase HI07 99.6 2.4E-15 8.3E-20 129.7 8.4 109 177-288 53-166 (201)
152 1i9g_A Hypothetical protein RV 99.6 2.5E-14 8.4E-19 129.4 15.5 120 163-287 85-205 (280)
153 4dcm_A Ribosomal RNA large sub 99.6 5.4E-14 1.9E-18 132.6 17.8 122 164-287 209-336 (375)
154 1ws6_A Methyltransferase; stru 99.6 2.3E-15 7.8E-20 125.6 7.5 106 177-290 41-152 (171)
155 3q7e_A Protein arginine N-meth 99.6 1.1E-14 3.8E-19 136.2 12.9 107 175-285 64-173 (349)
156 2h00_A Methyltransferase 10 do 99.6 1.4E-14 4.6E-19 129.4 12.8 146 177-334 65-235 (254)
157 3gnl_A Uncharacterized protein 99.6 5.9E-14 2E-18 123.5 16.5 148 166-347 12-163 (244)
158 3kr9_A SAM-dependent methyltra 99.6 8.7E-14 3E-18 121.3 17.3 146 167-347 7-157 (225)
159 1ixk_A Methyltransferase; open 99.6 2.4E-14 8.2E-19 132.0 14.2 118 167-287 108-248 (315)
160 2pjd_A Ribosomal RNA small sub 99.6 5.9E-15 2E-19 137.8 10.2 117 165-287 184-305 (343)
161 2fpo_A Methylase YHHF; structu 99.6 9.5E-15 3.3E-19 126.0 10.5 107 177-288 54-163 (202)
162 3bzb_A Uncharacterized protein 99.6 4.7E-14 1.6E-18 128.0 15.6 147 165-334 67-234 (281)
163 2esr_A Methyltransferase; stru 99.6 5.7E-15 2E-19 124.3 8.6 120 166-289 19-142 (177)
164 2fhp_A Methylase, putative; al 99.6 2E-14 6.9E-19 121.7 11.9 123 163-289 29-158 (187)
165 1ej0_A FTSJ; methyltransferase 99.6 6.5E-14 2.2E-18 117.0 14.6 100 175-288 20-139 (180)
166 3ntv_A MW1564 protein; rossman 99.6 7.3E-14 2.5E-18 123.1 15.5 118 166-288 60-179 (232)
167 3r0q_C Probable protein argini 99.6 2.6E-14 9E-19 135.0 13.2 115 167-286 53-170 (376)
168 3tfw_A Putative O-methyltransf 99.5 7.5E-14 2.6E-18 124.3 15.1 110 174-288 60-173 (248)
169 2vdv_E TRNA (guanine-N(7)-)-me 99.5 3.7E-14 1.3E-18 126.1 12.9 105 177-286 49-174 (246)
170 1af7_A Chemotaxis receptor met 99.5 1.5E-14 5.2E-19 130.3 10.1 107 177-283 105-250 (274)
171 1jg1_A PIMT;, protein-L-isoasp 99.5 3.6E-14 1.2E-18 125.2 12.3 113 165-288 79-192 (235)
172 3u81_A Catechol O-methyltransf 99.5 7.9E-15 2.7E-19 128.2 7.8 117 168-287 49-172 (221)
173 3gdh_A Trimethylguanosine synt 99.5 6.1E-16 2.1E-20 136.9 0.3 138 177-334 78-216 (241)
174 1g6q_1 HnRNP arginine N-methyl 99.5 4.6E-14 1.6E-18 130.9 12.9 105 175-283 36-143 (328)
175 1u2z_A Histone-lysine N-methyl 99.5 4.1E-14 1.4E-18 134.8 12.6 122 164-287 229-361 (433)
176 2y1w_A Histone-arginine methyl 99.5 4.9E-14 1.7E-18 131.7 12.9 117 166-287 39-157 (348)
177 2ozv_A Hypothetical protein AT 99.5 6E-14 2.1E-18 125.8 12.8 117 168-286 27-171 (260)
178 3opn_A Putative hemolysin; str 99.5 3.5E-15 1.2E-19 131.6 4.3 142 176-335 36-182 (232)
179 3hp7_A Hemolysin, putative; st 99.5 2.1E-14 7E-19 129.9 9.5 143 176-336 84-231 (291)
180 3tma_A Methyltransferase; thum 99.5 1.3E-13 4.4E-18 129.2 15.3 123 162-287 188-319 (354)
181 1i1n_A Protein-L-isoaspartate 99.5 1.1E-13 3.7E-18 121.2 13.7 106 175-287 75-184 (226)
182 3dr5_A Putative O-methyltransf 99.5 5.8E-14 2E-18 122.8 11.2 118 166-287 45-165 (221)
183 2pbf_A Protein-L-isoaspartate 99.5 1.1E-13 3.7E-18 121.3 12.7 106 175-287 78-195 (227)
184 2gpy_A O-methyltransferase; st 99.5 9E-14 3.1E-18 122.4 12.3 119 164-287 41-162 (233)
185 2yvl_A TRMI protein, hypotheti 99.5 3.3E-13 1.1E-17 119.6 14.7 114 165-287 79-192 (248)
186 4azs_A Methyltransferase WBDD; 99.5 2.4E-14 8.1E-19 142.4 7.9 106 178-288 67-176 (569)
187 2igt_A SAM dependent methyltra 99.5 1.1E-13 3.9E-18 128.2 11.9 118 167-287 142-274 (332)
188 3a27_A TYW2, uncharacterized p 99.5 2.7E-13 9.3E-18 122.4 13.0 106 175-288 117-222 (272)
189 3tm4_A TRNA (guanine N2-)-meth 99.5 1.3E-12 4.5E-17 123.1 17.9 138 162-333 203-348 (373)
190 3r3h_A O-methyltransferase, SA 99.5 8.1E-14 2.8E-18 123.6 9.0 117 168-289 51-174 (242)
191 1o9g_A RRNA methyltransferase; 99.5 1.5E-13 5.3E-18 122.3 10.8 120 166-286 40-215 (250)
192 2bm8_A Cephalosporin hydroxyla 99.5 5.3E-14 1.8E-18 124.4 7.7 99 177-286 81-188 (236)
193 3duw_A OMT, O-methyltransferas 99.5 7.3E-13 2.5E-17 115.6 14.9 116 168-288 49-170 (223)
194 1nv8_A HEMK protein; class I a 99.5 4.4E-13 1.5E-17 121.7 13.9 116 164-285 110-249 (284)
195 1r18_A Protein-L-isoaspartate( 99.5 2.1E-13 7.1E-18 119.6 11.3 112 168-287 73-196 (227)
196 2yxl_A PH0851 protein, 450AA l 99.5 8.4E-13 2.9E-17 127.5 16.4 119 167-288 249-392 (450)
197 3c3p_A Methyltransferase; NP_9 99.5 1.4E-13 4.7E-18 119.2 9.6 105 177-287 56-162 (210)
198 2plw_A Ribosomal RNA methyltra 99.5 2.5E-13 8.5E-18 116.5 10.8 99 175-287 20-156 (201)
199 3tr6_A O-methyltransferase; ce 99.5 3.4E-13 1.2E-17 117.8 11.6 110 174-288 61-177 (225)
200 3b3j_A Histone-arginine methyl 99.5 3.5E-13 1.2E-17 130.9 12.4 115 166-285 147-263 (480)
201 3adn_A Spermidine synthase; am 99.5 9.8E-13 3.3E-17 119.8 14.6 111 177-287 83-200 (294)
202 3sso_A Methyltransferase; macr 99.5 1.2E-13 4.1E-18 129.1 8.6 112 163-288 203-327 (419)
203 1iy9_A Spermidine synthase; ro 99.4 8.3E-13 2.8E-17 119.3 13.3 110 177-286 75-190 (275)
204 3ajd_A Putative methyltransfer 99.4 1.7E-13 5.8E-18 123.8 8.8 117 169-288 75-214 (274)
205 1sqg_A SUN protein, FMU protei 99.4 1.1E-12 3.8E-17 125.9 14.9 121 164-288 233-377 (429)
206 2qm3_A Predicted methyltransfe 99.4 4.3E-12 1.5E-16 119.6 18.4 106 176-286 171-279 (373)
207 1inl_A Spermidine synthase; be 99.4 6.9E-13 2.4E-17 121.1 12.4 110 177-286 90-206 (296)
208 1wy7_A Hypothetical protein PH 99.4 6.1E-12 2.1E-16 108.3 17.3 99 174-282 46-146 (207)
209 1uir_A Polyamine aminopropyltr 99.4 1.5E-12 5.3E-17 119.8 13.9 111 177-287 77-197 (314)
210 4hc4_A Protein arginine N-meth 99.4 8.8E-13 3E-17 123.6 12.2 102 177-283 83-187 (376)
211 1sui_A Caffeoyl-COA O-methyltr 99.4 3.7E-13 1.3E-17 119.7 9.1 107 176-287 78-192 (247)
212 1ne2_A Hypothetical protein TA 99.4 5E-12 1.7E-16 108.4 15.0 90 174-275 48-139 (200)
213 2hnk_A SAM-dependent O-methylt 99.4 6.1E-13 2.1E-17 117.5 8.8 118 166-288 49-184 (239)
214 2pt6_A Spermidine synthase; tr 99.4 1.6E-12 5.6E-17 119.9 11.7 109 177-286 116-231 (321)
215 3cbg_A O-methyltransferase; cy 99.4 7E-13 2.4E-17 116.8 8.7 108 176-288 71-185 (232)
216 1zq9_A Probable dimethyladenos 99.4 7.3E-13 2.5E-17 120.3 8.9 114 163-282 14-144 (285)
217 3gjy_A Spermidine synthase; AP 99.4 1.6E-12 5.4E-17 118.9 11.0 106 179-287 91-202 (317)
218 2f8l_A Hypothetical protein LM 99.4 9.1E-12 3.1E-16 116.1 16.2 125 158-287 107-258 (344)
219 2frx_A Hypothetical protein YE 99.4 6.4E-12 2.2E-16 121.8 15.0 118 168-288 106-249 (479)
220 2avd_A Catechol-O-methyltransf 99.4 1.1E-12 3.8E-17 114.8 8.8 115 168-287 60-181 (229)
221 3lcv_B Sisomicin-gentamicin re 99.4 3.7E-12 1.3E-16 111.9 12.0 153 164-340 121-275 (281)
222 3k6r_A Putative transferase PH 99.4 1.8E-11 6.2E-16 110.1 16.7 136 167-332 117-252 (278)
223 3m6w_A RRNA methylase; rRNA me 99.4 1.5E-12 5.1E-17 125.3 10.1 117 168-288 92-232 (464)
224 2i7c_A Spermidine synthase; tr 99.4 4.2E-12 1.4E-16 115.2 12.2 110 177-286 78-193 (283)
225 1xj5_A Spermidine synthase 1; 99.4 2.2E-12 7.4E-17 119.6 10.4 110 176-285 119-235 (334)
226 2b2c_A Spermidine synthase; be 99.4 2.5E-12 8.6E-17 118.2 10.6 108 177-285 108-222 (314)
227 2nyu_A Putative ribosomal RNA 99.4 2.9E-12 1E-16 109.3 10.4 99 175-287 20-147 (196)
228 2wa2_A Non-structural protein 99.3 4.2E-13 1.4E-17 121.1 5.0 106 174-287 79-195 (276)
229 2o07_A Spermidine synthase; st 99.3 1.5E-12 5E-17 119.3 8.6 112 176-287 94-211 (304)
230 2oxt_A Nucleoside-2'-O-methylt 99.3 4.6E-13 1.6E-17 120.2 5.1 107 173-287 70-187 (265)
231 1mjf_A Spermidine synthase; sp 99.3 4E-12 1.4E-16 115.2 11.4 107 177-287 75-195 (281)
232 3c3y_A Pfomt, O-methyltransfer 99.3 2.2E-12 7.4E-17 114.0 8.8 107 176-287 69-183 (237)
233 3m4x_A NOL1/NOP2/SUN family pr 99.3 2.8E-12 9.6E-17 123.2 9.3 118 168-288 96-237 (456)
234 3frh_A 16S rRNA methylase; met 99.3 2.2E-11 7.6E-16 106.0 13.4 100 176-283 104-204 (253)
235 3dou_A Ribosomal RNA large sub 99.3 1.1E-11 3.9E-16 105.7 11.1 97 175-287 23-141 (191)
236 2cmg_A Spermidine synthase; tr 99.3 4.3E-12 1.5E-16 113.7 8.8 100 177-286 72-172 (262)
237 1qam_A ERMC' methyltransferase 99.3 3.6E-12 1.2E-16 113.1 7.9 111 163-281 16-142 (244)
238 3c0k_A UPF0064 protein YCCW; P 99.3 1.5E-11 5E-16 116.9 10.7 110 176-287 219-341 (396)
239 2b78_A Hypothetical protein SM 99.3 9.2E-12 3.1E-16 117.8 8.9 110 176-287 211-333 (385)
240 1wxx_A TT1595, hypothetical pr 99.2 7.9E-12 2.7E-16 118.2 7.4 106 177-287 209-327 (382)
241 3v97_A Ribosomal RNA large sub 99.2 2E-11 6.9E-16 123.7 10.6 109 177-287 539-659 (703)
242 4dmg_A Putative uncharacterize 99.2 2.9E-11 9.9E-16 114.4 10.4 113 167-287 206-328 (393)
243 2as0_A Hypothetical protein PH 99.2 1.8E-11 6.3E-16 116.2 9.1 109 177-288 217-338 (396)
244 1yub_A Ermam, rRNA methyltrans 99.2 8.1E-14 2.8E-18 123.8 -7.0 112 166-285 18-145 (245)
245 1uwv_A 23S rRNA (uracil-5-)-me 99.2 1.9E-10 6.6E-15 110.4 16.0 112 165-285 274-389 (433)
246 2ih2_A Modification methylase 99.2 1.1E-10 3.7E-15 111.6 13.9 119 156-287 18-166 (421)
247 2okc_A Type I restriction enzy 99.2 4.7E-11 1.6E-15 115.1 10.7 129 157-287 151-309 (445)
248 2xyq_A Putative 2'-O-methyl tr 99.2 4.8E-11 1.6E-15 108.0 9.8 118 173-335 59-195 (290)
249 2h1r_A Dimethyladenosine trans 99.2 5.5E-11 1.9E-15 108.6 9.9 109 163-279 28-153 (299)
250 3gru_A Dimethyladenosine trans 99.2 8.8E-11 3E-15 106.7 11.1 88 163-257 36-123 (295)
251 2p41_A Type II methyltransfera 99.2 7.7E-12 2.6E-16 114.5 4.1 104 175-288 80-194 (305)
252 2yx1_A Hypothetical protein MJ 99.2 1.6E-10 5.6E-15 107.2 11.5 100 177-288 195-294 (336)
253 2jjq_A Uncharacterized RNA met 99.1 6.5E-10 2.2E-14 106.3 14.8 99 176-285 289-387 (425)
254 3k0b_A Predicted N6-adenine-sp 99.1 2.7E-10 9.3E-15 107.8 11.8 123 162-287 186-352 (393)
255 3b5i_A S-adenosyl-L-methionine 99.1 3.2E-09 1.1E-13 99.3 17.4 157 178-334 53-295 (374)
256 3ldg_A Putative uncharacterize 99.1 1.2E-09 4.2E-14 102.9 13.2 122 163-287 180-345 (384)
257 3tqs_A Ribosomal RNA small sub 99.1 4.9E-10 1.7E-14 99.7 9.6 85 163-255 15-103 (255)
258 3ldu_A Putative methylase; str 99.1 1.2E-09 4.1E-14 103.2 12.8 123 162-287 180-346 (385)
259 2b9e_A NOL1/NOP2/SUN domain fa 99.1 1.3E-09 4.4E-14 99.8 12.6 117 168-288 93-237 (309)
260 1m6y_A S-adenosyl-methyltransf 99.0 6.3E-10 2.1E-14 101.4 8.0 87 166-256 15-106 (301)
261 3fut_A Dimethyladenosine trans 99.0 1E-09 3.4E-14 98.5 9.0 86 163-257 33-119 (271)
262 3bt7_A TRNA (uracil-5-)-methyl 99.0 1.1E-09 3.7E-14 103.0 9.5 112 164-287 201-328 (369)
263 2efj_A 3,7-dimethylxanthine me 99.0 4E-09 1.4E-13 98.7 13.2 152 178-334 53-289 (384)
264 2qfm_A Spermine synthase; sper 99.0 1.1E-09 3.8E-14 101.3 8.4 110 177-287 188-316 (364)
265 2ar0_A M.ecoki, type I restric 98.9 2.7E-09 9.3E-14 105.0 10.6 131 156-287 148-314 (541)
266 1m6e_X S-adenosyl-L-methionnin 98.9 5.8E-09 2E-13 96.8 8.9 154 178-333 52-276 (359)
267 2dul_A N(2),N(2)-dimethylguano 98.9 5.5E-09 1.9E-13 98.2 8.8 105 177-285 47-164 (378)
268 3uzu_A Ribosomal RNA small sub 98.8 5.8E-09 2E-13 94.0 8.5 77 163-246 28-106 (279)
269 3ftd_A Dimethyladenosine trans 98.8 1.4E-08 4.7E-13 90.1 10.5 91 163-261 17-107 (249)
270 3v97_A Ribosomal RNA large sub 98.8 2.7E-08 9.1E-13 100.9 13.6 125 162-288 175-350 (703)
271 3lkd_A Type I restriction-modi 98.8 4.1E-08 1.4E-12 96.4 14.0 147 140-287 175-360 (542)
272 3axs_A Probable N(2),N(2)-dime 98.8 1E-08 3.4E-13 96.6 9.0 104 176-285 51-158 (392)
273 4gqb_A Protein arginine N-meth 98.8 3.3E-08 1.1E-12 98.1 11.5 101 178-282 358-464 (637)
274 2r6z_A UPF0341 protein in RSP 98.8 1.7E-09 5.7E-14 96.5 2.0 87 170-260 76-173 (258)
275 2qy6_A UPF0209 protein YFCK; s 98.8 2E-08 7E-13 89.3 8.8 142 177-348 60-247 (257)
276 1qyr_A KSGA, high level kasuga 98.7 5.4E-09 1.8E-13 92.9 4.6 86 164-256 8-98 (252)
277 3khk_A Type I restriction-modi 98.7 2.8E-08 9.7E-13 97.7 9.4 145 140-287 203-397 (544)
278 3o4f_A Spermidine synthase; am 98.7 2.8E-07 9.6E-12 83.0 13.0 110 177-287 83-200 (294)
279 2oyr_A UPF0341 protein YHIQ; a 98.6 2.5E-08 8.6E-13 88.6 5.9 109 168-279 77-194 (258)
280 3evf_A RNA-directed RNA polyme 98.6 8E-08 2.7E-12 84.9 7.9 109 173-287 70-186 (277)
281 3ua3_A Protein arginine N-meth 98.6 1.4E-07 4.9E-12 93.5 10.1 101 178-282 410-531 (745)
282 3cvo_A Methyltransferase-like 98.6 9.2E-07 3.1E-11 75.3 13.2 99 177-284 30-153 (202)
283 3ll7_A Putative methyltransfer 98.5 1.5E-07 5E-12 88.9 8.1 76 177-255 93-170 (410)
284 3s1s_A Restriction endonucleas 98.5 1.1E-06 3.8E-11 88.5 13.3 132 156-287 294-467 (878)
285 3gcz_A Polyprotein; flavivirus 98.3 2.7E-07 9.1E-12 81.7 4.3 115 166-287 80-203 (282)
286 4fzv_A Putative methyltransfer 98.3 2.7E-06 9.3E-11 79.0 10.0 121 168-289 139-288 (359)
287 4auk_A Ribosomal RNA large sub 98.3 2.3E-06 7.8E-11 79.1 9.3 88 175-278 209-296 (375)
288 2jny_A Uncharacterized BCR; st 98.3 3.8E-07 1.3E-11 62.7 2.5 47 66-121 5-51 (67)
289 2wk1_A NOVP; transferase, O-me 98.2 3.4E-06 1.2E-10 75.7 9.0 108 176-286 105-245 (282)
290 2jr6_A UPF0434 protein NMA0874 98.2 4.7E-07 1.6E-11 62.5 2.5 46 67-121 4-49 (68)
291 2js4_A UPF0434 protein BB2007; 98.2 5E-07 1.7E-11 62.8 2.1 46 67-121 4-49 (70)
292 2pk7_A Uncharacterized protein 98.2 5.6E-07 1.9E-11 62.3 1.9 46 67-121 4-49 (69)
293 1wg8_A Predicted S-adenosylmet 98.2 4.6E-06 1.6E-10 74.2 8.4 81 166-255 11-96 (285)
294 2hf1_A Tetraacyldisaccharide-1 98.2 4.5E-07 1.5E-11 62.6 1.4 46 67-121 4-49 (68)
295 3ufb_A Type I restriction-modi 98.2 2.1E-05 7.3E-10 77.0 13.7 145 140-287 176-364 (530)
296 2kpi_A Uncharacterized protein 98.0 2.5E-06 8.5E-11 56.6 2.8 45 66-121 5-51 (56)
297 3c6k_A Spermine synthase; sper 98.0 9.8E-06 3.4E-10 75.2 7.7 108 177-285 205-331 (381)
298 3eld_A Methyltransferase; flav 98.0 7.9E-06 2.7E-10 72.8 6.6 107 175-287 79-193 (300)
299 2k4m_A TR8_protein, UPF0146 pr 98.0 1.8E-05 6.1E-10 63.1 7.8 97 166-289 26-125 (153)
300 2zig_A TTHA0409, putative modi 98.0 2.4E-05 8.1E-10 71.0 9.1 61 161-224 220-280 (297)
301 1rjd_A PPM1P, carboxy methyl t 97.9 7.8E-05 2.7E-09 68.6 11.3 158 170-330 90-281 (334)
302 3lkz_A Non-structural protein 97.8 0.0001 3.5E-09 65.4 10.6 108 173-287 90-206 (321)
303 2px2_A Genome polyprotein [con 97.8 4.7E-05 1.6E-09 66.4 8.3 104 174-287 70-185 (269)
304 2k5r_A Uncharacterized protein 97.8 6.2E-06 2.1E-10 60.7 2.4 54 67-120 4-75 (97)
305 2vz8_A Fatty acid synthase; tr 97.8 4.5E-06 1.5E-10 95.2 1.9 148 177-335 1240-1393(2512)
306 3p8z_A Mtase, non-structural p 97.7 0.00026 9E-09 60.8 11.2 107 174-288 75-189 (267)
307 3tka_A Ribosomal RNA small sub 97.5 0.00011 3.6E-09 67.0 5.7 83 166-255 46-135 (347)
308 2uyo_A Hypothetical protein ML 97.4 0.002 6.7E-08 58.6 12.8 150 179-332 104-274 (310)
309 1i4w_A Mitochondrial replicati 97.4 0.00044 1.5E-08 63.9 8.3 74 163-242 38-117 (353)
310 3vyw_A MNMC2; tRNA wobble urid 97.4 0.0019 6.5E-08 58.2 12.0 141 178-349 97-261 (308)
311 1g60_A Adenine-specific methyl 97.2 0.00084 2.9E-08 59.4 8.1 62 160-224 196-257 (260)
312 3r24_A NSP16, 2'-O-methyl tran 96.8 0.0047 1.6E-07 54.8 8.5 95 176-288 108-220 (344)
313 3iei_A Leucine carboxyl methyl 96.6 0.13 4.3E-06 47.0 16.9 153 177-335 90-279 (334)
314 2oo3_A Protein involved in cat 96.1 0.0036 1.2E-07 55.7 3.9 115 164-289 82-202 (283)
315 3qv2_A 5-cytosine DNA methyltr 95.8 0.15 5E-06 46.5 13.4 126 178-333 10-156 (327)
316 3tos_A CALS11; methyltransfera 95.6 0.06 2.1E-06 47.2 9.4 107 178-287 70-219 (257)
317 1kol_A Formaldehyde dehydrogen 95.6 0.11 3.7E-06 48.6 11.8 104 172-285 180-300 (398)
318 1pft_A TFIIB, PFTFIIBN; N-term 95.4 0.0078 2.7E-07 38.6 2.3 33 70-111 4-37 (50)
319 2py6_A Methyltransferase FKBM; 95.3 0.046 1.6E-06 51.5 8.4 67 175-241 224-293 (409)
320 1f8f_A Benzyl alcohol dehydrog 95.3 0.07 2.4E-06 49.4 9.5 101 171-286 184-290 (371)
321 2dph_A Formaldehyde dismutase; 95.2 0.096 3.3E-06 49.0 10.2 104 171-285 179-299 (398)
322 3g7u_A Cytosine-specific methy 95.0 0.058 2E-06 50.2 7.9 72 179-259 3-82 (376)
323 4ej6_A Putative zinc-binding d 95.0 0.66 2.3E-05 42.7 15.1 102 171-287 176-286 (370)
324 3two_A Mannitol dehydrogenase; 94.8 0.12 4E-06 47.3 9.5 94 173-286 172-266 (348)
325 1pqw_A Polyketide synthase; ro 94.8 0.15 5E-06 42.4 9.3 96 171-286 32-138 (198)
326 1boo_A Protein (N-4 cytosine-s 94.7 0.057 2E-06 49.1 6.9 61 161-224 237-297 (323)
327 1g55_A DNA cytosine methyltran 94.7 0.034 1.2E-06 51.1 5.3 71 179-257 3-77 (343)
328 1eg2_A Modification methylase 94.5 0.093 3.2E-06 47.6 7.7 61 161-224 227-290 (319)
329 3ps9_A TRNA 5-methylaminomethy 94.3 0.26 8.9E-06 49.4 11.2 127 178-335 67-239 (676)
330 3pvc_A TRNA 5-methylaminomethy 94.2 0.19 6.5E-06 50.6 10.0 128 178-335 59-231 (689)
331 1v3u_A Leukotriene B4 12- hydr 94.1 0.23 7.9E-06 45.0 9.5 97 171-286 139-245 (333)
332 1uuf_A YAHK, zinc-type alcohol 94.0 0.14 4.8E-06 47.3 8.1 95 173-286 190-289 (369)
333 3goh_A Alcohol dehydrogenase, 94.0 0.13 4.3E-06 46.4 7.5 93 171-285 136-229 (315)
334 3uog_A Alcohol dehydrogenase; 93.9 0.37 1.3E-05 44.3 10.7 100 171-287 183-289 (363)
335 2zwa_A Leucine carboxyl methyl 93.9 1.6 5.6E-05 43.8 16.1 155 177-335 107-307 (695)
336 3s2e_A Zinc-containing alcohol 93.8 0.26 8.8E-06 44.8 9.4 98 171-286 160-264 (340)
337 3ip1_A Alcohol dehydrogenase, 93.8 0.36 1.2E-05 45.1 10.4 99 174-286 210-319 (404)
338 1pl8_A Human sorbitol dehydrog 93.5 0.29 9.9E-06 44.8 9.1 100 172-286 166-274 (356)
339 3fpc_A NADP-dependent alcohol 93.4 0.28 9.6E-06 44.8 8.8 101 171-286 160-267 (352)
340 3uko_A Alcohol dehydrogenase c 93.3 0.38 1.3E-05 44.5 9.7 103 169-286 185-296 (378)
341 1dl6_A Transcription factor II 93.3 0.058 2E-06 35.7 2.9 34 67-109 7-41 (58)
342 4b7c_A Probable oxidoreductase 93.3 0.21 7.3E-06 45.3 7.8 100 169-286 141-249 (336)
343 1zkd_A DUF185; NESG, RPR58, st 93.1 0.48 1.6E-05 44.0 9.9 76 178-262 81-163 (387)
344 3q87_A Putative uncharacterize 93.1 0.022 7.4E-07 43.9 0.6 27 94-120 95-121 (125)
345 1e3j_A NADP(H)-dependent ketos 92.9 0.84 2.9E-05 41.6 11.3 99 172-286 163-272 (352)
346 3m6i_A L-arabinitol 4-dehydrog 92.9 1.1 3.7E-05 41.0 12.1 103 171-286 173-284 (363)
347 4dvj_A Putative zinc-dependent 92.8 0.63 2.1E-05 42.8 10.4 91 177-284 171-269 (363)
348 2j3h_A NADP-dependent oxidored 92.8 0.39 1.3E-05 43.7 8.8 98 171-286 149-256 (345)
349 2c7p_A Modification methylase 92.6 0.31 1.1E-05 44.3 7.8 68 178-256 11-79 (327)
350 1p0f_A NADP-dependent alcohol 92.6 0.65 2.2E-05 42.7 10.2 101 171-286 185-294 (373)
351 3gms_A Putative NADPH:quinone 92.6 0.36 1.2E-05 43.9 8.3 102 169-287 136-245 (340)
352 3j20_Y 30S ribosomal protein S 92.6 0.046 1.6E-06 34.9 1.5 30 71-109 19-48 (50)
353 3qwb_A Probable quinone oxidor 92.6 0.66 2.3E-05 41.9 10.0 99 171-286 142-248 (334)
354 2qrv_A DNA (cytosine-5)-methyl 92.5 0.21 7.3E-06 44.7 6.4 71 177-255 15-90 (295)
355 1cdo_A Alcohol dehydrogenase; 92.5 0.84 2.9E-05 42.0 10.8 99 171-286 186-295 (374)
356 2jhf_A Alcohol dehydrogenase E 92.4 0.86 2.9E-05 41.9 10.8 101 171-286 185-294 (374)
357 1e3i_A Alcohol dehydrogenase, 92.3 0.89 3.1E-05 41.8 10.6 99 171-286 189-298 (376)
358 2fzw_A Alcohol dehydrogenase c 92.2 0.75 2.6E-05 42.3 10.1 101 171-286 184-293 (373)
359 2hcy_A Alcohol dehydrogenase 1 92.1 0.36 1.2E-05 44.0 7.7 95 174-286 166-270 (347)
360 4eye_A Probable oxidoreductase 92.1 0.42 1.4E-05 43.5 8.1 97 171-285 153-257 (342)
361 3jv7_A ADH-A; dehydrogenase, n 92.0 0.71 2.4E-05 41.9 9.5 97 174-286 168-271 (345)
362 2zig_A TTHA0409, putative modi 92.0 0.29 9.8E-06 43.8 6.7 57 230-286 20-98 (297)
363 2jne_A Hypothetical protein YF 92.0 0.052 1.8E-06 39.3 1.4 36 64-110 25-60 (101)
364 3jyn_A Quinone oxidoreductase; 92.0 0.56 1.9E-05 42.2 8.8 100 171-287 134-241 (325)
365 4h0n_A DNMT2; SAH binding, tra 91.9 0.21 7E-06 45.6 5.7 124 179-333 4-145 (333)
366 1yb5_A Quinone oxidoreductase; 91.9 0.99 3.4E-05 41.2 10.4 96 171-285 164-269 (351)
367 1jvb_A NAD(H)-dependent alcoho 91.8 0.41 1.4E-05 43.6 7.6 95 173-286 166-272 (347)
368 2eih_A Alcohol dehydrogenase; 91.6 1 3.4E-05 40.9 10.0 95 173-286 162-266 (343)
369 2c0c_A Zinc binding alcohol de 91.5 0.99 3.4E-05 41.4 10.0 100 171-287 157-263 (362)
370 1piw_A Hypothetical zinc-type 91.3 0.29 9.9E-06 44.9 6.0 98 173-285 175-276 (360)
371 2b5w_A Glucose dehydrogenase; 91.3 0.91 3.1E-05 41.5 9.4 90 179-287 174-275 (357)
372 1rjw_A ADH-HT, alcohol dehydro 91.2 0.97 3.3E-05 41.0 9.5 95 174-286 161-262 (339)
373 2k5c_A Uncharacterized protein 91.0 0.032 1.1E-06 38.8 -0.5 16 69-84 6-21 (95)
374 4a2c_A Galactitol-1-phosphate 91.0 2 6.9E-05 38.8 11.4 103 170-287 153-262 (346)
375 3nx4_A Putative oxidoreductase 90.9 0.64 2.2E-05 41.8 7.9 91 180-286 149-242 (324)
376 3fwz_A Inner membrane protein 90.9 2.9 9.9E-05 32.3 10.9 92 178-286 7-106 (140)
377 4eez_A Alcohol dehydrogenase 1 90.9 1.7 5.7E-05 39.3 10.8 98 173-285 159-263 (348)
378 1qor_A Quinone oxidoreductase; 90.6 0.61 2.1E-05 42.0 7.5 95 172-286 135-240 (327)
379 1vj0_A Alcohol dehydrogenase, 90.4 0.81 2.8E-05 42.3 8.2 100 172-286 189-299 (380)
380 2d8a_A PH0655, probable L-thre 90.2 1.3 4.5E-05 40.2 9.4 97 171-286 162-268 (348)
381 2zb4_A Prostaglandin reductase 89.8 1.5 5.3E-05 39.8 9.6 98 171-286 152-261 (357)
382 3krt_A Crotonyl COA reductase; 89.7 1.4 4.7E-05 41.8 9.4 96 173-285 224-344 (456)
383 2j8z_A Quinone oxidoreductase; 89.7 1.3 4.3E-05 40.5 8.9 97 171-286 156-262 (354)
384 4dup_A Quinone oxidoreductase; 89.6 1 3.5E-05 41.1 8.2 99 171-286 161-266 (353)
385 4f3n_A Uncharacterized ACR, CO 89.5 0.59 2E-05 44.0 6.4 46 178-223 138-188 (432)
386 3fbg_A Putative arginate lyase 89.4 2.2 7.6E-05 38.6 10.3 90 177-284 150-247 (346)
387 4dcm_A Ribosomal RNA large sub 89.4 3.2 0.00011 38.2 11.5 113 167-289 27-140 (375)
388 1wly_A CAAR, 2-haloacrylate re 89.4 1.3 4.3E-05 40.0 8.6 96 172-286 140-245 (333)
389 2h6e_A ADH-4, D-arabinose 1-de 89.3 0.68 2.3E-05 42.1 6.7 96 174-286 168-270 (344)
390 3c85_A Putative glutathione-re 89.2 3.1 0.00011 33.7 10.1 92 178-286 39-140 (183)
391 3tqh_A Quinone oxidoreductase; 89.1 1.4 5E-05 39.4 8.7 96 171-284 146-244 (321)
392 1iz0_A Quinone oxidoreductase; 89.1 0.49 1.7E-05 42.1 5.5 92 175-286 123-219 (302)
393 2cdc_A Glucose dehydrogenase g 89.0 1.9 6.4E-05 39.5 9.6 87 178-286 181-279 (366)
394 1vq8_Z 50S ribosomal protein L 89.0 0.12 4.1E-06 36.8 1.0 31 70-109 26-56 (83)
395 2cf5_A Atccad5, CAD, cinnamyl 88.6 0.39 1.3E-05 44.0 4.6 98 174-286 176-276 (357)
396 3h0g_L DNA-directed RNA polyme 88.4 0.36 1.2E-05 32.2 3.0 34 67-110 17-50 (63)
397 3pxx_A Carveol dehydrogenase; 88.2 3.9 0.00013 35.6 10.8 104 177-286 9-154 (287)
398 2jrp_A Putative cytoplasmic pr 88.2 0.21 7E-06 35.2 1.8 27 72-109 3-29 (81)
399 1qyp_A RNA polymerase II; tran 88.1 0.15 5.1E-06 33.5 1.0 39 71-109 15-54 (57)
400 3gaz_A Alcohol dehydrogenase s 88.1 2.3 7.7E-05 38.6 9.4 95 171-285 144-246 (343)
401 2j6a_A Protein TRM112; transla 87.9 0.11 3.8E-06 40.8 0.3 28 94-121 105-132 (141)
402 2dq4_A L-threonine 3-dehydroge 87.9 0.74 2.5E-05 41.8 5.9 95 172-286 160-263 (343)
403 3llv_A Exopolyphosphatase-rela 87.7 1.9 6.6E-05 33.2 7.6 91 178-286 6-104 (141)
404 1yqd_A Sinapyl alcohol dehydro 87.6 0.7 2.4E-05 42.5 5.6 96 174-286 183-283 (366)
405 3ius_A Uncharacterized conserv 87.5 9.8 0.00034 32.8 13.0 70 179-264 6-79 (286)
406 3ioy_A Short-chain dehydrogena 87.5 6 0.0002 35.3 11.7 79 177-259 7-98 (319)
407 1twf_L ABC10-alpha, DNA-direct 87.5 0.32 1.1E-05 33.4 2.3 29 69-107 26-54 (70)
408 3grk_A Enoyl-(acyl-carrier-pro 87.4 5.3 0.00018 35.2 11.2 104 177-287 30-171 (293)
409 3ubt_Y Modification methylase 87.1 0.91 3.1E-05 40.9 6.0 124 180-333 2-139 (331)
410 4eso_A Putative oxidoreductase 86.9 4.2 0.00014 34.9 10.0 102 177-287 7-140 (255)
411 1xa0_A Putative NADPH dependen 86.6 1.2 4E-05 40.1 6.5 97 174-286 145-247 (328)
412 3oig_A Enoyl-[acyl-carrier-pro 86.5 4 0.00014 35.2 9.7 106 177-287 6-149 (266)
413 2vn8_A Reticulon-4-interacting 86.3 3 0.0001 38.2 9.2 95 175-285 181-280 (375)
414 3o26_A Salutaridine reductase; 86.1 7 0.00024 34.2 11.3 77 178-259 12-102 (311)
415 3ijr_A Oxidoreductase, short c 86.0 6.2 0.00021 34.6 10.8 104 177-286 46-183 (291)
416 1tt7_A YHFP; alcohol dehydroge 85.6 1.5 5.2E-05 39.4 6.7 97 174-286 146-248 (330)
417 3ggo_A Prephenate dehydrogenas 85.2 5.6 0.00019 35.6 10.2 90 179-283 34-126 (314)
418 3is3_A 17BETA-hydroxysteroid d 85.1 7 0.00024 33.8 10.6 106 177-288 17-155 (270)
419 4fs3_A Enoyl-[acyl-carrier-pro 85.0 5.1 0.00017 34.5 9.6 106 177-287 5-148 (256)
420 3po3_S Transcription elongatio 85.0 0.76 2.6E-05 37.8 3.9 40 69-108 135-175 (178)
421 2k4x_A 30S ribosomal protein S 84.9 0.49 1.7E-05 30.8 2.1 30 71-109 18-47 (55)
422 2vhw_A Alanine dehydrogenase; 84.8 0.59 2E-05 43.3 3.5 102 176-285 166-268 (377)
423 4a0s_A Octenoyl-COA reductase/ 84.5 4.7 0.00016 37.9 9.8 97 173-285 216-336 (447)
424 1boo_A Protein (N-4 cytosine-s 84.5 0.94 3.2E-05 40.9 4.7 57 230-286 13-85 (323)
425 3r3s_A Oxidoreductase; structu 84.4 6 0.0002 34.8 9.9 105 177-287 48-187 (294)
426 3me5_A Cytosine-specific methy 84.3 2 6.7E-05 41.2 7.0 71 166-242 70-146 (482)
427 1wma_A Carbonyl reductase [NAD 84.2 4.6 0.00016 34.6 9.0 102 178-286 4-139 (276)
428 3v2g_A 3-oxoacyl-[acyl-carrier 84.2 7.9 0.00027 33.6 10.5 105 177-287 30-167 (271)
429 4g81_D Putative hexonate dehyd 84.0 6.8 0.00023 33.9 9.9 78 177-260 8-98 (255)
430 1pqv_S STP-alpha, transcriptio 83.9 0.38 1.3E-05 43.3 1.7 40 69-108 266-306 (309)
431 3k31_A Enoyl-(acyl-carrier-pro 83.9 3.7 0.00013 36.2 8.3 104 177-287 29-170 (296)
432 1pjc_A Protein (L-alanine dehy 83.7 0.87 3E-05 41.9 4.1 101 178-287 167-269 (361)
433 1tfi_A Transcriptional elongat 83.7 0.32 1.1E-05 31.0 0.8 39 70-108 8-47 (50)
434 3edm_A Short chain dehydrogena 83.1 5.4 0.00018 34.3 8.9 104 177-286 7-144 (259)
435 2akl_A PHNA-like protein PA012 82.5 0.5 1.7E-05 36.2 1.6 29 71-109 27-55 (138)
436 3tsc_A Putative oxidoreductase 82.5 9.2 0.00032 33.1 10.3 77 177-259 10-112 (277)
437 1gh9_A 8.3 kDa protein (gene M 82.3 0.46 1.6E-05 32.6 1.2 30 71-111 4-33 (71)
438 3j21_g 50S ribosomal protein L 82.0 0.6 2E-05 29.7 1.6 29 67-108 10-38 (51)
439 2eez_A Alanine dehydrogenase; 82.0 0.94 3.2E-05 41.7 3.7 100 177-285 165-266 (369)
440 4fgs_A Probable dehydrogenase 81.9 8.7 0.0003 33.6 9.8 101 177-286 28-160 (273)
441 4egf_A L-xylulose reductase; s 81.7 8.5 0.00029 33.2 9.7 77 177-259 19-109 (266)
442 1ja9_A 4HNR, 1,3,6,8-tetrahydr 81.7 6.1 0.00021 33.9 8.8 77 177-259 20-110 (274)
443 3ek2_A Enoyl-(acyl-carrier-pro 81.5 11 0.00038 32.2 10.4 106 175-287 11-155 (271)
444 3sx2_A Putative 3-ketoacyl-(ac 81.5 6.5 0.00022 34.1 8.9 78 177-260 12-114 (278)
445 3u5t_A 3-oxoacyl-[acyl-carrier 81.5 7.2 0.00024 33.8 9.1 104 177-286 26-162 (267)
446 1xhl_A Short-chain dehydrogena 80.5 8.4 0.00029 33.9 9.4 79 177-258 25-116 (297)
447 3ce6_A Adenosylhomocysteinase; 80.1 4.3 0.00015 38.9 7.6 90 175-285 271-361 (494)
448 4fn4_A Short chain dehydrogena 79.8 8.2 0.00028 33.4 8.8 76 177-258 6-94 (254)
449 3l9w_A Glutathione-regulated p 79.5 9.7 0.00033 35.5 9.8 93 178-287 4-104 (413)
450 3p2y_A Alanine dehydrogenase/p 78.2 0.73 2.5E-05 42.7 1.5 97 177-285 183-302 (381)
451 4dio_A NAD(P) transhydrogenase 78.0 1.2 4.3E-05 41.5 3.1 42 177-219 189-231 (405)
452 1zcj_A Peroxisomal bifunctiona 77.9 13 0.00045 35.1 10.3 95 178-283 37-148 (463)
453 3jyw_9 60S ribosomal protein L 77.8 1.5 5.1E-05 30.0 2.6 31 70-109 25-55 (72)
454 3h0g_I DNA-directed RNA polyme 77.6 1.6 5.6E-05 32.8 3.1 38 71-113 4-41 (113)
455 1lss_A TRK system potassium up 77.5 20 0.00068 26.8 10.3 88 179-283 5-100 (140)
456 3gvc_A Oxidoreductase, probabl 77.2 13 0.00044 32.3 9.4 75 177-260 28-115 (277)
457 3f9i_A 3-oxoacyl-[acyl-carrier 76.7 24 0.00083 29.6 11.0 74 176-258 12-94 (249)
458 3ucx_A Short chain dehydrogena 76.6 14 0.00047 31.7 9.4 76 177-258 10-98 (264)
459 3swr_A DNA (cytosine-5)-methyl 76.6 3.4 0.00012 43.1 6.1 71 178-257 540-627 (1002)
460 1g0o_A Trihydroxynaphthalene r 76.3 14 0.00049 31.9 9.5 104 178-287 29-165 (283)
461 1gee_A Glucose 1-dehydrogenase 76.2 11 0.00038 32.0 8.7 75 178-258 7-95 (261)
462 3qt1_I DNA-directed RNA polyme 76.2 2.2 7.6E-05 33.1 3.6 39 69-112 22-60 (133)
463 3e8x_A Putative NAD-dependent 76.2 16 0.00055 30.4 9.5 75 177-264 20-100 (236)
464 4e6p_A Probable sorbitol dehyd 76.1 13 0.00045 31.7 9.1 73 177-258 7-92 (259)
465 2g1u_A Hypothetical protein TM 76.1 6.8 0.00023 30.7 6.7 94 177-286 18-119 (155)
466 4ayb_P DNA-directed RNA polyme 76.1 1.8 6.3E-05 26.7 2.4 31 70-107 2-32 (48)
467 3j21_i 50S ribosomal protein L 75.9 0.97 3.3E-05 31.9 1.3 31 70-109 34-64 (83)
468 1l7d_A Nicotinamide nucleotide 75.9 1.8 6.1E-05 40.1 3.5 42 177-219 171-213 (384)
469 3l77_A Short-chain alcohol deh 75.9 24 0.00082 29.3 10.6 77 178-260 2-92 (235)
470 3qiv_A Short-chain dehydrogena 75.8 11 0.00037 32.0 8.4 76 177-258 8-96 (253)
471 2gdz_A NAD+-dependent 15-hydro 75.8 15 0.00051 31.5 9.4 105 178-286 7-140 (267)
472 2f1k_A Prephenate dehydrogenas 75.6 12 0.00042 32.3 8.8 85 180-282 2-88 (279)
473 3iht_A S-adenosyl-L-methionine 75.6 7.8 0.00027 30.9 6.5 32 178-209 41-72 (174)
474 1ae1_A Tropinone reductase-I; 75.5 8.7 0.0003 33.2 7.8 76 177-258 20-109 (273)
475 3ksu_A 3-oxoacyl-acyl carrier 75.5 10 0.00036 32.5 8.3 104 177-286 10-148 (262)
476 4a27_A Synaptic vesicle membra 75.1 6 0.00021 35.7 6.9 98 170-286 135-239 (349)
477 2dpo_A L-gulonate 3-dehydrogen 74.9 9.6 0.00033 34.2 8.0 94 179-283 7-121 (319)
478 3tjr_A Short chain dehydrogena 74.5 13 0.00044 32.7 8.8 78 176-259 29-119 (301)
479 3h7a_A Short chain dehydrogena 74.4 8.4 0.00029 32.9 7.3 77 177-259 6-94 (252)
480 2km1_A Protein DRE2; yeast, an 74.3 2.6 8.9E-05 32.8 3.5 41 243-283 54-96 (136)
481 1zsy_A Mitochondrial 2-enoyl t 74.3 15 0.00051 33.2 9.3 98 171-285 161-270 (357)
482 3flo_B DNA polymerase alpha ca 74.2 1.4 4.9E-05 37.0 2.1 39 70-108 21-59 (206)
483 2x9g_A PTR1, pteridine reducta 73.9 16 0.00055 31.7 9.2 76 177-258 22-116 (288)
484 1spx_A Short-chain reductase f 73.9 6.4 0.00022 34.1 6.5 78 178-258 6-96 (278)
485 1x13_A NAD(P) transhydrogenase 73.8 1.6 5.4E-05 40.8 2.6 42 177-219 171-213 (401)
486 3gqv_A Enoyl reductase; medium 73.8 17 0.00059 33.0 9.7 93 176-285 163-263 (371)
487 1xg5_A ARPG836; short chain de 73.3 25 0.00087 30.2 10.3 77 178-258 32-121 (279)
488 3dmg_A Probable ribosomal RNA 73.1 9.5 0.00033 35.1 7.7 108 166-289 35-143 (381)
489 3rkr_A Short chain oxidoreduct 72.6 13 0.00045 31.7 8.2 77 176-258 27-116 (262)
490 3gaf_A 7-alpha-hydroxysteroid 72.4 14 0.00049 31.5 8.3 77 177-259 11-100 (256)
491 1twf_I B12.6, DNA-directed RNA 72.4 1.5 5.2E-05 33.5 1.7 38 70-112 3-40 (122)
492 4e12_A Diketoreductase; oxidor 72.0 7.1 0.00024 34.2 6.4 93 179-282 5-118 (283)
493 3iz5_m 60S ribosomal protein L 71.8 1.6 5.6E-05 31.3 1.6 31 70-109 35-65 (92)
494 3u6p_A Formamidopyrimidine-DNA 71.8 0.96 3.3E-05 39.9 0.5 27 72-105 246-272 (273)
495 2pd4_A Enoyl-[acyl-carrier-pro 71.5 14 0.00048 31.8 8.2 102 178-286 6-145 (275)
496 3lyl_A 3-oxoacyl-(acyl-carrier 71.4 15 0.00051 30.9 8.2 76 178-259 5-93 (247)
497 3cc2_Z 50S ribosomal protein L 71.3 1.3 4.3E-05 33.3 1.0 31 70-109 59-89 (116)
498 1k82_A Formamidopyrimidine-DNA 71.0 1 3.5E-05 39.6 0.5 27 72-105 241-267 (268)
499 3icc_A Putative 3-oxoacyl-(acy 70.9 11 0.00038 31.9 7.3 104 178-287 7-149 (255)
500 3sju_A Keto reductase; short-c 70.9 16 0.00056 31.6 8.5 76 178-259 24-112 (279)
No 1
>4e2x_A TCAB9; kijanose, tetronitrose, tetradeoxy sugar, sugar methylation, transferase; HET: SAH TYD; 1.40A {Micromonospora chalcea} PDB: 3ndi_A* 3ndj_A* 4e32_A* 4e33_A* 4e2y_A* 4e31_A* 4e2w_A* 4e2z_A* 4e30_A*
Probab=99.92 E-value=1.7e-25 Score=214.85 Aligned_cols=171 Identities=12% Similarity=0.144 Sum_probs=129.6
Q ss_pred HHHHHHHhccCCCCCCeEEEEcCccCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHhhhCCCCCCCeEEEEecCCCCC
Q 018740 164 KEFELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLP 243 (351)
Q Consensus 164 ~~~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~g~~~~~i~~~~~d~~~lp 243 (351)
...+.+...+...++.+|||||||+|.++..+++.+. +|+|+|+|+.+++.|+++ +.......+...+...++
T Consensus 94 ~~~~~l~~~~~~~~~~~VLDiGcG~G~~~~~l~~~g~--~v~gvD~s~~~~~~a~~~-----~~~~~~~~~~~~~~~~l~ 166 (416)
T 4e2x_A 94 MLARDFLATELTGPDPFIVEIGCNDGIMLRTIQEAGV--RHLGFEPSSGVAAKAREK-----GIRVRTDFFEKATADDVR 166 (416)
T ss_dssp HHHHHHHHTTTCSSSCEEEEETCTTTTTHHHHHHTTC--EEEEECCCHHHHHHHHTT-----TCCEECSCCSHHHHHHHH
T ss_pred HHHHHHHHHhCCCCCCEEEEecCCCCHHHHHHHHcCC--cEEEECCCHHHHHHHHHc-----CCCcceeeechhhHhhcc
Confidence 3455667777777788999999999999999999876 999999999999999875 110111112234445566
Q ss_pred CCCCceeeEEeccccccCCChHHHHHHHHhcccCCcEEEEEeeccCCCCCcchHHHHHHHHHhhccCCccCCCHHHHHHH
Q 018740 244 FASSSIDAVHAGAAIHCWSSPSTGVAEISRVLRPGGVFVGTTYIVDGPFNLIPFSRLLRQNMMQISGSYTFLSEREIEDL 323 (351)
Q Consensus 244 ~~~~~fD~V~~~~vl~h~~d~~~~l~~i~~~LkpgG~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~~l 323 (351)
+++++||+|++.+++||++|+..+|++++++|||||++++.+++... . ............|..+++.+++.++
T Consensus 167 ~~~~~fD~I~~~~vl~h~~d~~~~l~~~~r~LkpgG~l~i~~~~~~~------~-~~~~~~~~~~~~~~~~~s~~~l~~l 239 (416)
T 4e2x_A 167 RTEGPANVIYAANTLCHIPYVQSVLEGVDALLAPDGVFVFEDPYLGD------I-VAKTSFDQIFDEHFFLFSATSVQGM 239 (416)
T ss_dssp HHHCCEEEEEEESCGGGCTTHHHHHHHHHHHEEEEEEEEEEEECHHH------H-HHHTCGGGCSTTCCEECCHHHHHHH
T ss_pred cCCCCEEEEEECChHHhcCCHHHHHHHHHHHcCCCeEEEEEeCChHH------h-hhhcchhhhhhhhhhcCCHHHHHHH
Confidence 77889999999999999999999999999999999999998876421 1 0011111113457889999999999
Q ss_pred HHHCCCeEEEEEe----cCeEEEEEEecC
Q 018740 324 CRACGLVDFKCTR----NRGFVMFTATKP 348 (351)
Q Consensus 324 l~~aGf~~v~~~~----~g~~~~~~a~kp 348 (351)
++++||++++... .|.+.++.+++.
T Consensus 240 l~~aGf~~~~~~~~~~~~g~l~~~~~~~~ 268 (416)
T 4e2x_A 240 AQRCGFELVDVQRLPVHGGEVRYTLARQG 268 (416)
T ss_dssp HHHTTEEEEEEEEECGGGSEEEEEEEETT
T ss_pred HHHcCCEEEEEEEccCCCCEEEEEEEeCC
Confidence 9999999988654 566666666553
No 2
>4gek_A TRNA (CMO5U34)-methyltransferase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, rossmann fold; HET: GEK; 1.50A {Escherichia coli} PDB: 1im8_A*
Probab=99.91 E-value=3.9e-23 Score=185.88 Aligned_cols=171 Identities=13% Similarity=0.130 Sum_probs=128.9
Q ss_pred CCCCeEEEEcCccCHHHHHHHHhC--CCCeEEEEeCCHHHHHHHHHHHhhhCCCCCCCeEEEEecCCCCCCCCCceeeEE
Q 018740 176 VLGGNIIDASCGSGLFSRIFAKSG--LFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLPFASSSIDAVH 253 (351)
Q Consensus 176 ~~~~~vLDiGcG~G~~~~~l~~~~--~~~~v~gvD~s~~~~~~a~~~~~~~~g~~~~~i~~~~~d~~~lp~~~~~fD~V~ 253 (351)
.++.+|||+|||+|.++..+++.. ++.+|+|+|+|+.|++.|++++... +. ..+++++++|+.++|+ +.||+|+
T Consensus 69 ~~~~~vLDlGcGtG~~~~~la~~~~~~~~~v~gvD~s~~ml~~A~~~~~~~-~~-~~~v~~~~~D~~~~~~--~~~d~v~ 144 (261)
T 4gek_A 69 QPGTQVYDLGCSLGAATLSVRRNIHHDNCKIIAIDNSPAMIERCRRHIDAY-KA-PTPVDVIEGDIRDIAI--ENASMVV 144 (261)
T ss_dssp CTTCEEEEETCTTTHHHHHHHHTCCSSSCEEEEEESCHHHHHHHHHHHHTS-CC-SSCEEEEESCTTTCCC--CSEEEEE
T ss_pred CCCCEEEEEeCCCCHHHHHHHHhcCCCCCEEEEEECCHHHHHHHHHHHHhh-cc-CceEEEeecccccccc--cccccce
Confidence 458899999999999999999874 3568999999999999999998765 21 4689999999999886 4699999
Q ss_pred eccccccCCCh--HHHHHHHHhcccCCcEEEEEeeccCCCCCcchHHHHHHHHHhh---c------------cCCccCCC
Q 018740 254 AGAAIHCWSSP--STGVAEISRVLRPGGVFVGTTYIVDGPFNLIPFSRLLRQNMMQ---I------------SGSYTFLS 316 (351)
Q Consensus 254 ~~~vl~h~~d~--~~~l~~i~~~LkpgG~li~~~~~~~~~~~~~~~~~~~~~~~~~---~------------~~~~~~~s 316 (351)
++.++||++++ ..+|++++++|||||++++.+...................+.. + ......++
T Consensus 145 ~~~~l~~~~~~~~~~~l~~i~~~LkpGG~lii~e~~~~~~~~~~~~~~~~~~~~~~~~g~s~~ei~~~~~~l~~~~~~~s 224 (261)
T 4gek_A 145 LNFTLQFLEPSERQALLDKIYQGLNPGGALVLSEKFSFEDAKVGELLFNMHHDFKRANGYSELEISQKRSMLENVMLTDS 224 (261)
T ss_dssp EESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEBCCSSHHHHHHHHHHHHHHHHHTTGGGSTTHHHHHHHHHHCCCBC
T ss_pred eeeeeeecCchhHhHHHHHHHHHcCCCcEEEEEeccCCCCHHHHHHHHHHHHHHHHHcCCCHHHHHHHHhhhcccccCCC
Confidence 99999999765 4789999999999999999887653211111111111110000 0 11234568
Q ss_pred HHHHHHHHHHCCCeEEEEEe-cCeEEEEEEecCCC
Q 018740 317 EREIEDLCRACGLVDFKCTR-NRGFVMFTATKPSQ 350 (351)
Q Consensus 317 ~~~l~~ll~~aGf~~v~~~~-~g~~~~~~a~kp~~ 350 (351)
.+++.++|+++||+.++.+. ...+..++|.|+.+
T Consensus 225 ~~~~~~~L~~AGF~~ve~~fq~~nF~~~iA~K~~~ 259 (261)
T 4gek_A 225 VETHKARLHKAGFEHSELWFQCFNFGSLVALKAED 259 (261)
T ss_dssp HHHHHHHHHHHTCSEEEEEEEETTEEEEEEECCTT
T ss_pred HHHHHHHHHHcCCCeEEEEEEeccEEEEEEEEcCC
Confidence 89999999999999988653 44567788999875
No 3
>3dtn_A Putative methyltransferase MM_2633; structural genomics, unknown function, PSI-2, protein structure initiative; 2.09A {Methanosarcina mazei}
Probab=99.91 E-value=1.2e-22 Score=179.54 Aligned_cols=181 Identities=15% Similarity=0.220 Sum_probs=138.8
Q ss_pred HHHHHHHhccC-CCCCCeEEEEcCccCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHhhhCCCCCCCeEEEEecCCCC
Q 018740 164 KEFELMKGYLK-PVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRL 242 (351)
Q Consensus 164 ~~~~~l~~~l~-~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~g~~~~~i~~~~~d~~~l 242 (351)
...+.+...+. ..++.+|||+|||+|.++..+++..+..+++|+|+|+.+++.+++++... .++.++++|+.++
T Consensus 30 ~~~~~~~~~~~~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~-----~~~~~~~~d~~~~ 104 (234)
T 3dtn_A 30 DFYGVSVSIASVDTENPDILDLGAGTGLLSAFLMEKYPEATFTLVDMSEKMLEIAKNRFRGN-----LKVKYIEADYSKY 104 (234)
T ss_dssp HHHHHHHHTCCCSCSSCEEEEETCTTSHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHTCSC-----TTEEEEESCTTTC
T ss_pred HHHHHHHHHhhcCCCCCeEEEecCCCCHHHHHHHHhCCCCeEEEEECCHHHHHHHHHhhccC-----CCEEEEeCchhcc
Confidence 33455556554 45678999999999999999999977779999999999999999987654 3899999999999
Q ss_pred CCCCCceeeEEeccccccCCChH--HHHHHHHhcccCCcEEEEEeeccCCCCCcchHHHHHHHHH--------------h
Q 018740 243 PFASSSIDAVHAGAAIHCWSSPS--TGVAEISRVLRPGGVFVGTTYIVDGPFNLIPFSRLLRQNM--------------M 306 (351)
Q Consensus 243 p~~~~~fD~V~~~~vl~h~~d~~--~~l~~i~~~LkpgG~li~~~~~~~~~~~~~~~~~~~~~~~--------------~ 306 (351)
+++ ++||+|++..+++|++++. .+++++.++|||||.+++.++...............+... .
T Consensus 105 ~~~-~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 183 (234)
T 3dtn_A 105 DFE-EKYDMVVSALSIHHLEDEDKKELYKRSYSILKESGIFINADLVHGETAFIENLNKTIWRQYVENSGLTEEEIAAGY 183 (234)
T ss_dssp CCC-SCEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEECBCSSHHHHHHHHHHHHHHHHTSSCCHHHHHTTC
T ss_pred CCC-CCceEEEEeCccccCCHHHHHHHHHHHHHhcCCCcEEEEEEecCCCChhhhhHHHHHHHHHHHhcCCCHHHHHHHH
Confidence 876 8999999999999998776 5999999999999999999987643211111111111111 0
Q ss_pred hccCCccCCCHHHHHHHHHHCCCeEEEEE-ecCeEEEEEEecCCC
Q 018740 307 QISGSYTFLSEREIEDLCRACGLVDFKCT-RNRGFVMFTATKPSQ 350 (351)
Q Consensus 307 ~~~~~~~~~s~~~l~~ll~~aGf~~v~~~-~~g~~~~~~a~kp~~ 350 (351)
....+...++.+++.++|+++||+++++. ....+.++.+.|+++
T Consensus 184 ~~~~~~~~~~~~~~~~ll~~aGF~~v~~~~~~~~~~~~~~~~~~~ 228 (234)
T 3dtn_A 184 ERSKLDKDIEMNQQLNWLKEAGFRDVSCIYKYYQFAVMFGRKTEG 228 (234)
T ss_dssp ----CCCCCBHHHHHHHHHHTTCEEEEEEEEETTEEEEEEECC--
T ss_pred HhcccccccCHHHHHHHHHHcCCCceeeeeeecceeEEEEEeccc
Confidence 11235567899999999999999999854 456678888888874
No 4
>3dh0_A SAM dependent methyltransferase; cystal structure, PSI-2, NYSGXRC, structural genomics, protein structure initiative; HET: SAM; 2.72A {Aquifex aeolicus}
Probab=99.90 E-value=1e-22 Score=177.88 Aligned_cols=166 Identities=17% Similarity=0.189 Sum_probs=138.9
Q ss_pred HHHHhccCCCCCCeEEEEcCccCHHHHHHHHhC-CCCeEEEEeCCHHHHHHHHHHHhhhCCCCCCCeEEEEecCCCCCCC
Q 018740 167 ELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSG-LFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLPFA 245 (351)
Q Consensus 167 ~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~-~~~~v~gvD~s~~~~~~a~~~~~~~~g~~~~~i~~~~~d~~~lp~~ 245 (351)
+.+...+...++.+|||+|||+|.++..+++.+ +..+|+|+|+|+.+++.+++++... + ..++.++.+|+.+++++
T Consensus 27 ~~~~~~~~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~-~--~~~~~~~~~d~~~~~~~ 103 (219)
T 3dh0_A 27 EKVLKEFGLKEGMTVLDVGTGAGFYLPYLSKMVGEKGKVYAIDVQEEMVNYAWEKVNKL-G--LKNVEVLKSEENKIPLP 103 (219)
T ss_dssp HHHHHHHTCCTTCEEEESSCTTCTTHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHH-T--CTTEEEEECBTTBCSSC
T ss_pred HHHHHHhCCCCCCEEEEEecCCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHc-C--CCcEEEEecccccCCCC
Confidence 345555666678899999999999999999885 5569999999999999999998776 2 35899999999999988
Q ss_pred CCceeeEEeccccccCCChHHHHHHHHhcccCCcEEEEEeeccCCCCCcchHHHHHHHHHhhccCCccCCCHHHHHHHHH
Q 018740 246 SSSIDAVHAGAAIHCWSSPSTGVAEISRVLRPGGVFVGTTYIVDGPFNLIPFSRLLRQNMMQISGSYTFLSEREIEDLCR 325 (351)
Q Consensus 246 ~~~fD~V~~~~vl~h~~d~~~~l~~i~~~LkpgG~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~~ll~ 325 (351)
+++||+|++..+++|++++..+++++.++|+|||.+++.++....... ...+..+++.+++.++++
T Consensus 104 ~~~fD~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~--------------~~~~~~~~~~~~~~~~l~ 169 (219)
T 3dh0_A 104 DNTVDFIFMAFTFHELSEPLKFLEELKRVAKPFAYLAIIDWKKEERDK--------------GPPPEEVYSEWEVGLILE 169 (219)
T ss_dssp SSCEEEEEEESCGGGCSSHHHHHHHHHHHEEEEEEEEEEEECSSCCSS--------------SCCGGGSCCHHHHHHHHH
T ss_pred CCCeeEEEeehhhhhcCCHHHHHHHHHHHhCCCeEEEEEEeccccccc--------------CCchhcccCHHHHHHHHH
Confidence 999999999999999999999999999999999999999887643211 122445789999999999
Q ss_pred HCCCeEEEEEe-cCeEEEEEEecCC
Q 018740 326 ACGLVDFKCTR-NRGFVMFTATKPS 349 (351)
Q Consensus 326 ~aGf~~v~~~~-~g~~~~~~a~kp~ 349 (351)
++||++++... .+....+.++|+.
T Consensus 170 ~~Gf~~~~~~~~~~~~~~~~~~k~~ 194 (219)
T 3dh0_A 170 DAGIRVGRVVEVGKYCFGVYAMIVK 194 (219)
T ss_dssp HTTCEEEEEEEETTTEEEEEEECC-
T ss_pred HCCCEEEEEEeeCCceEEEEEEecc
Confidence 99999988554 4567777788875
No 5
>1vl5_A Unknown conserved protein BH2331; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: MSE; 1.95A {Bacillus halodurans} SCOP: c.66.1.41
Probab=99.90 E-value=5.1e-23 Score=184.88 Aligned_cols=162 Identities=18% Similarity=0.231 Sum_probs=131.9
Q ss_pred HHHHHhccCCCCCCeEEEEcCccCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHhhhCCCCCCCeEEEEecCCCCCCC
Q 018740 166 FELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLPFA 245 (351)
Q Consensus 166 ~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~g~~~~~i~~~~~d~~~lp~~ 245 (351)
.+.+...+...++.+|||||||+|.++..+++.++ +|+|+|+|+.|++.+++++... + .+++.++.+|+.++|++
T Consensus 26 ~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~--~v~gvD~s~~~l~~a~~~~~~~-~--~~~v~~~~~d~~~l~~~ 100 (260)
T 1vl5_A 26 LAKLMQIAALKGNEEVLDVATGGGHVANAFAPFVK--KVVAFDLTEDILKVARAFIEGN-G--HQQVEYVQGDAEQMPFT 100 (260)
T ss_dssp HHHHHHHHTCCSCCEEEEETCTTCHHHHHHGGGSS--EEEEEESCHHHHHHHHHHHHHT-T--CCSEEEEECCC-CCCSC
T ss_pred HHHHHHHhCCCCCCEEEEEeCCCCHHHHHHHHhCC--EEEEEeCCHHHHHHHHHHHHhc-C--CCceEEEEecHHhCCCC
Confidence 34566666667788999999999999999999886 9999999999999999988765 2 36899999999999999
Q ss_pred CCceeeEEeccccccCCChHHHHHHHHhcccCCcEEEEEeeccCCCCCcchHHHHHHHHHh--hccCCccCCCHHHHHHH
Q 018740 246 SSSIDAVHAGAAIHCWSSPSTGVAEISRVLRPGGVFVGTTYIVDGPFNLIPFSRLLRQNMM--QISGSYTFLSEREIEDL 323 (351)
Q Consensus 246 ~~~fD~V~~~~vl~h~~d~~~~l~~i~~~LkpgG~li~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~s~~~l~~l 323 (351)
+++||+|++..+++|++|+..+|+++.++|||||++++.++..... +....+..... ....+..+++.+++.++
T Consensus 101 ~~~fD~V~~~~~l~~~~d~~~~l~~~~r~LkpgG~l~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 176 (260)
T 1vl5_A 101 DERFHIVTCRIAAHHFPNPASFVSEAYRVLKKGGQLLLVDNSAPEN----DAFDVFYNYVEKERDYSHHRAWKKSDWLKM 176 (260)
T ss_dssp TTCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEEEEBCSS----HHHHHHHHHHHHHHCTTCCCCCBHHHHHHH
T ss_pred CCCEEEEEEhhhhHhcCCHHHHHHHHHHHcCCCCEEEEEEcCCCCC----HHHHHHHHHHHHhcCccccCCCCHHHHHHH
Confidence 9999999999999999999999999999999999999987765321 22222221111 12345678899999999
Q ss_pred HHHCCCeEEEEEe
Q 018740 324 CRACGLVDFKCTR 336 (351)
Q Consensus 324 l~~aGf~~v~~~~ 336 (351)
|+++||+++....
T Consensus 177 l~~aGf~~~~~~~ 189 (260)
T 1vl5_A 177 LEEAGFELEELHC 189 (260)
T ss_dssp HHHHTCEEEEEEE
T ss_pred HHHCCCeEEEEEE
Confidence 9999999877543
No 6
>3dlc_A Putative S-adenosyl-L-methionine-dependent methyltransferase; structural genomics, joint center for structural genomics; HET: MSE SAM; 1.15A {Methanococcus maripaludis}
Probab=99.90 E-value=1.1e-22 Score=177.11 Aligned_cols=178 Identities=17% Similarity=0.253 Sum_probs=137.8
Q ss_pred HHHHHHHhccCCCCCCeEEEEcCccCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHhhhCCCCCCCeEEEEecCCCCC
Q 018740 164 KEFELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLP 243 (351)
Q Consensus 164 ~~~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~g~~~~~i~~~~~d~~~lp 243 (351)
...+.+...+...++ +|||+|||+|.++..+++. +..+++|+|+|+.+++.+++++... +. ..++.++++|+.+++
T Consensus 31 ~~~~~~~~~~~~~~~-~vLdiG~G~G~~~~~l~~~-~~~~v~~~D~s~~~~~~a~~~~~~~-~~-~~~~~~~~~d~~~~~ 106 (219)
T 3dlc_A 31 IIAENIINRFGITAG-TCIDIGSGPGALSIALAKQ-SDFSIRALDFSKHMNEIALKNIADA-NL-NDRIQIVQGDVHNIP 106 (219)
T ss_dssp HHHHHHHHHHCCCEE-EEEEETCTTSHHHHHHHHH-SEEEEEEEESCHHHHHHHHHHHHHT-TC-TTTEEEEECBTTBCS
T ss_pred HHHHHHHHhcCCCCC-EEEEECCCCCHHHHHHHHc-CCCeEEEEECCHHHHHHHHHHHHhc-cc-cCceEEEEcCHHHCC
Confidence 345566666665555 9999999999999999998 4569999999999999999998776 22 358999999999999
Q ss_pred CCCCceeeEEeccccccCCChHHHHHHHHhcccCCcEEEEEeeccCCCCCcchHHHHHHHHHhh--------ccCCccCC
Q 018740 244 FASSSIDAVHAGAAIHCWSSPSTGVAEISRVLRPGGVFVGTTYIVDGPFNLIPFSRLLRQNMMQ--------ISGSYTFL 315 (351)
Q Consensus 244 ~~~~~fD~V~~~~vl~h~~d~~~~l~~i~~~LkpgG~li~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~ 315 (351)
+++++||+|++..+++|++++..+++++.++|+|||.+++.++..+. ............ ...+..++
T Consensus 107 ~~~~~~D~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 181 (219)
T 3dlc_A 107 IEDNYADLIVSRGSVFFWEDVATAFREIYRILKSGGKTYIGGGFGNK-----ELRDSISAEMIRKNPDWKEFNRKNISQE 181 (219)
T ss_dssp SCTTCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEECCSSH-----HHHHHHHHHHHHHCTTHHHHHHHHSSHH
T ss_pred CCcccccEEEECchHhhccCHHHHHHHHHHhCCCCCEEEEEeccCcH-----HHHHHHHHHHHHhHHHHHhhhhhccccC
Confidence 98999999999999999999999999999999999999998755421 111111111100 11244566
Q ss_pred CHHHHHHHHHHCCCeEEEEEecCeEEEEEEecCCC
Q 018740 316 SEREIEDLCRACGLVDFKCTRNRGFVMFTATKPSQ 350 (351)
Q Consensus 316 s~~~l~~ll~~aGf~~v~~~~~g~~~~~~a~kp~~ 350 (351)
+.+++.++|+++||++++........++..+|+.+
T Consensus 182 ~~~~~~~~l~~aGf~~v~~~~~~~~~~~~~~k~~~ 216 (219)
T 3dlc_A 182 NVERFQNVLDEIGISSYEIILGDEGFWIIISKTDQ 216 (219)
T ss_dssp HHHHHHHHHHHHTCSSEEEEEETTEEEEEEBCCSC
T ss_pred CHHHHHHHHHHcCCCeEEEEecCCceEEEEecccc
Confidence 88999999999999998877655555555666653
No 7
>3hnr_A Probable methyltransferase BT9727_4108; structural genomics, PSI-2, protein structure initiative; 2.80A {Bacillus thuringiensis serovarkonkukian}
Probab=99.90 E-value=4.1e-23 Score=180.64 Aligned_cols=171 Identities=17% Similarity=0.149 Sum_probs=133.0
Q ss_pred HHhccCCCCCCeEEEEcCccCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHhhhCCCCCCCeEEEEecCCCCCCCCCc
Q 018740 169 MKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLPFASSS 248 (351)
Q Consensus 169 l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~g~~~~~i~~~~~d~~~lp~~~~~ 248 (351)
+...+...++.+|||+|||+|.++..+++.+. +++|+|+|+.+++.+++++. .++.++.+|+.+++++ ++
T Consensus 37 ~l~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~--~v~~vD~s~~~~~~a~~~~~-------~~~~~~~~d~~~~~~~-~~ 106 (220)
T 3hnr_A 37 ILEDVVNKSFGNVLEFGVGTGNLTNKLLLAGR--TVYGIEPSREMRMIAKEKLP-------KEFSITEGDFLSFEVP-TS 106 (220)
T ss_dssp HHHHHHHTCCSEEEEECCTTSHHHHHHHHTTC--EEEEECSCHHHHHHHHHHSC-------TTCCEESCCSSSCCCC-SC
T ss_pred HHHHhhccCCCeEEEeCCCCCHHHHHHHhCCC--eEEEEeCCHHHHHHHHHhCC-------CceEEEeCChhhcCCC-CC
Confidence 33333344678999999999999999999865 99999999999999998732 3788999999999887 89
Q ss_pred eeeEEeccccccCCChHH--HHHHHHhcccCCcEEEEEeeccCCCCCcchHHHHHHHHH----hhccCCccCCCHHHHHH
Q 018740 249 IDAVHAGAAIHCWSSPST--GVAEISRVLRPGGVFVGTTYIVDGPFNLIPFSRLLRQNM----MQISGSYTFLSEREIED 322 (351)
Q Consensus 249 fD~V~~~~vl~h~~d~~~--~l~~i~~~LkpgG~li~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~s~~~l~~ 322 (351)
||+|++..+++|++++.. +|+++.++|||||.+++.++................... ........+++.+++.+
T Consensus 107 fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (220)
T 3hnr_A 107 IDTIVSTYAFHHLTDDEKNVAIAKYSQLLNKGGKIVFADTIFADQDAYDKTVEAAKQRGFHQLANDLQTEYYTRIPVMQT 186 (220)
T ss_dssp CSEEEEESCGGGSCHHHHHHHHHHHHHHSCTTCEEEEEEECBSSHHHHHHHHHHHHHTTCHHHHHHHHHSCCCBHHHHHH
T ss_pred eEEEEECcchhcCChHHHHHHHHHHHHhcCCCCEEEEEeccccChHHHHHHHHHHHhCCCccchhhcchhhcCCHHHHHH
Confidence 999999999999999977 999999999999999999877543211111111110000 01111235679999999
Q ss_pred HHHHCCCeEEEEEecCeEEEEEEecCC
Q 018740 323 LCRACGLVDFKCTRNRGFVMFTATKPS 349 (351)
Q Consensus 323 ll~~aGf~~v~~~~~g~~~~~~a~kp~ 349 (351)
+++++||+++.....+..+++.++|+.
T Consensus 187 ~l~~aGf~v~~~~~~~~~w~~~~~~~~ 213 (220)
T 3hnr_A 187 IFENNGFHVTFTRLNHFVWVMEATKQL 213 (220)
T ss_dssp HHHHTTEEEEEEECSSSEEEEEEEECS
T ss_pred HHHHCCCEEEEeeccceEEEEeehhhh
Confidence 999999999888888888888888875
No 8
>3bus_A REBM, methyltransferase; rebeccamycin synthesis; HET: SAH; 2.65A {Lechevalieria aerocolonigenes}
Probab=99.89 E-value=1.2e-21 Score=177.03 Aligned_cols=167 Identities=22% Similarity=0.266 Sum_probs=134.3
Q ss_pred HHHHHhccCCCCCCeEEEEcCccCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHhhhCCCCCCCeEEEEecCCCCCCC
Q 018740 166 FELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLPFA 245 (351)
Q Consensus 166 ~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~g~~~~~i~~~~~d~~~lp~~ 245 (351)
.+.+.+.+...++.+|||||||+|.++..+++.. ..+|+|+|+|+.+++.+++++... |. ..++.++.+|+.++|++
T Consensus 50 ~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~-~~~v~gvD~s~~~~~~a~~~~~~~-~~-~~~~~~~~~d~~~~~~~ 126 (273)
T 3bus_A 50 TDEMIALLDVRSGDRVLDVGCGIGKPAVRLATAR-DVRVTGISISRPQVNQANARATAA-GL-ANRVTFSYADAMDLPFE 126 (273)
T ss_dssp HHHHHHHSCCCTTCEEEEESCTTSHHHHHHHHHS-CCEEEEEESCHHHHHHHHHHHHHT-TC-TTTEEEEECCTTSCCSC
T ss_pred HHHHHHhcCCCCCCEEEEeCCCCCHHHHHHHHhc-CCEEEEEeCCHHHHHHHHHHHHhc-CC-CcceEEEECccccCCCC
Confidence 4566677777778999999999999999999874 459999999999999999988765 22 35799999999999998
Q ss_pred CCceeeEEeccccccCCChHHHHHHHHhcccCCcEEEEEeeccCCCCCcchHHHHHHHHHhhccCCccCCCHHHHHHHHH
Q 018740 246 SSSIDAVHAGAAIHCWSSPSTGVAEISRVLRPGGVFVGTTYIVDGPFNLIPFSRLLRQNMMQISGSYTFLSEREIEDLCR 325 (351)
Q Consensus 246 ~~~fD~V~~~~vl~h~~d~~~~l~~i~~~LkpgG~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~~ll~ 325 (351)
+++||+|++..+++|++++..+|+++.++|||||.+++.++...... ..........+.....+..+++.+++.++++
T Consensus 127 ~~~fD~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 204 (273)
T 3bus_A 127 DASFDAVWALESLHHMPDRGRALREMARVLRPGGTVAIADFVLLAPV--EGAKKEAVDAFRAGGGVLSLGGIDEYESDVR 204 (273)
T ss_dssp TTCEEEEEEESCTTTSSCHHHHHHHHHTTEEEEEEEEEEEEEESSCC--CHHHHHHHHHHHHHHTCCCCCCHHHHHHHHH
T ss_pred CCCccEEEEechhhhCCCHHHHHHHHHHHcCCCeEEEEEEeeccCCC--ChhHHHHHHHHHhhcCccCCCCHHHHHHHHH
Confidence 89999999999999999999999999999999999999998764321 1111111111111223556889999999999
Q ss_pred HCCCeEEEEEec
Q 018740 326 ACGLVDFKCTRN 337 (351)
Q Consensus 326 ~aGf~~v~~~~~ 337 (351)
++||++++....
T Consensus 205 ~aGf~~~~~~~~ 216 (273)
T 3bus_A 205 QAELVVTSTVDI 216 (273)
T ss_dssp HTTCEEEEEEEC
T ss_pred HcCCeEEEEEEC
Confidence 999999876543
No 9
>1xxl_A YCGJ protein; structural genomics, protein structure initiative, PSI, NEW YORK SGX research center for structural genomics, nysgxrc; 2.10A {Bacillus subtilis} SCOP: c.66.1.41 PDB: 2glu_A*
Probab=99.89 E-value=6.6e-22 Score=175.54 Aligned_cols=161 Identities=20% Similarity=0.237 Sum_probs=133.2
Q ss_pred HHHHhccCCCCCCeEEEEcCccCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHhhhCCCCCCCeEEEEecCCCCCCCC
Q 018740 167 ELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLPFAS 246 (351)
Q Consensus 167 ~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~g~~~~~i~~~~~d~~~lp~~~ 246 (351)
..+...+...++.+|||||||+|.++..+++.+. +|+|+|+|+.+++.+++++... + ..++.++.+|+..+|+++
T Consensus 11 ~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~--~v~~vD~s~~~~~~a~~~~~~~-~--~~~v~~~~~d~~~~~~~~ 85 (239)
T 1xxl_A 11 GLMIKTAECRAEHRVLDIGAGAGHTALAFSPYVQ--ECIGVDATKEMVEVASSFAQEK-G--VENVRFQQGTAESLPFPD 85 (239)
T ss_dssp HHHHHHHTCCTTCEEEEESCTTSHHHHHHGGGSS--EEEEEESCHHHHHHHHHHHHHH-T--CCSEEEEECBTTBCCSCT
T ss_pred chHHHHhCcCCCCEEEEEccCcCHHHHHHHHhCC--EEEEEECCHHHHHHHHHHHHHc-C--CCCeEEEecccccCCCCC
Confidence 4556666777889999999999999999999886 9999999999999999988776 2 368999999999999988
Q ss_pred CceeeEEeccccccCCChHHHHHHHHhcccCCcEEEEEeeccCCCCCcchHHHHHHHHHh--hccCCccCCCHHHHHHHH
Q 018740 247 SSIDAVHAGAAIHCWSSPSTGVAEISRVLRPGGVFVGTTYIVDGPFNLIPFSRLLRQNMM--QISGSYTFLSEREIEDLC 324 (351)
Q Consensus 247 ~~fD~V~~~~vl~h~~d~~~~l~~i~~~LkpgG~li~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~s~~~l~~ll 324 (351)
++||+|++..+++|++++..+++++.++|+|||.+++.++..... +....+..... ....+...++.+++.++|
T Consensus 86 ~~fD~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll 161 (239)
T 1xxl_A 86 DSFDIITCRYAAHHFSDVRKAVREVARVLKQDGRFLLVDHYAPED----PVLDEFVNHLNRLRDPSHVRESSLSEWQAMF 161 (239)
T ss_dssp TCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEEECBCSS----HHHHHHHHHHHHHHCTTCCCCCBHHHHHHHH
T ss_pred CcEEEEEECCchhhccCHHHHHHHHHHHcCCCcEEEEEEcCCCCC----hhHHHHHHHHHHhccccccCCCCHHHHHHHH
Confidence 999999999999999999999999999999999999988765422 22222222111 123466788999999999
Q ss_pred HHCCCeEEEEEe
Q 018740 325 RACGLVDFKCTR 336 (351)
Q Consensus 325 ~~aGf~~v~~~~ 336 (351)
+++||.+++...
T Consensus 162 ~~aGf~~~~~~~ 173 (239)
T 1xxl_A 162 SANQLAYQDIQK 173 (239)
T ss_dssp HHTTEEEEEEEE
T ss_pred HHCCCcEEEEEe
Confidence 999999877543
No 10
>2o57_A Putative sarcosine dimethylglycine methyltransferase; structural genomics, protein structure initiative, PSI-2; 1.95A {Galdieria sulphuraria} SCOP: c.66.1.18
Probab=99.89 E-value=2.3e-21 Score=177.50 Aligned_cols=164 Identities=18% Similarity=0.166 Sum_probs=131.8
Q ss_pred HHHHHHhcc----CCCCCCeEEEEcCccCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHhhhCCCCCCCeEEEEecCC
Q 018740 165 EFELMKGYL----KPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADIS 240 (351)
Q Consensus 165 ~~~~l~~~l----~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~g~~~~~i~~~~~d~~ 240 (351)
..+.+...+ ...++.+|||||||+|.++..+++.. ..+|+|+|+|+.+++.+++++... |. ..++.++.+|+.
T Consensus 66 ~~~~l~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~-~~~v~gvD~s~~~~~~a~~~~~~~-~~-~~~~~~~~~d~~ 142 (297)
T 2o57_A 66 TDEWLASELAMTGVLQRQAKGLDLGAGYGGAARFLVRKF-GVSIDCLNIAPVQNKRNEEYNNQA-GL-ADNITVKYGSFL 142 (297)
T ss_dssp HHHHHHHHHHHTTCCCTTCEEEEETCTTSHHHHHHHHHH-CCEEEEEESCHHHHHHHHHHHHHH-TC-TTTEEEEECCTT
T ss_pred HHHHHHHHhhhccCCCCCCEEEEeCCCCCHHHHHHHHHh-CCEEEEEeCCHHHHHHHHHHHHhc-CC-CcceEEEEcCcc
Confidence 345566666 66678899999999999999999873 239999999999999999988765 22 367999999999
Q ss_pred CCCCCCCceeeEEeccccccCCChHHHHHHHHhcccCCcEEEEEeeccCCCCCcchHHHHHHHHHhhccCCccCCCHHHH
Q 018740 241 RLPFASSSIDAVHAGAAIHCWSSPSTGVAEISRVLRPGGVFVGTTYIVDGPFNLIPFSRLLRQNMMQISGSYTFLSEREI 320 (351)
Q Consensus 241 ~lp~~~~~fD~V~~~~vl~h~~d~~~~l~~i~~~LkpgG~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~l 320 (351)
++|+++++||+|++..+++|++++..+|+++.++|||||.+++.++......... ....+.... ....+.+.+++
T Consensus 143 ~~~~~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~-~~~~~~~~~----~~~~~~~~~~~ 217 (297)
T 2o57_A 143 EIPCEDNSYDFIWSQDAFLHSPDKLKVFQECARVLKPRGVMAITDPMKEDGIDKS-SIQPILDRI----KLHDMGSLGLY 217 (297)
T ss_dssp SCSSCTTCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEEEEECTTCCGG-GGHHHHHHH----TCSSCCCHHHH
T ss_pred cCCCCCCCEeEEEecchhhhcCCHHHHHHHHHHHcCCCeEEEEEEeccCCCCchH-HHHHHHHHh----cCCCCCCHHHH
Confidence 9999999999999999999999999999999999999999999998765432221 122221111 12346799999
Q ss_pred HHHHHHCCCeEEEEEe
Q 018740 321 EDLCRACGLVDFKCTR 336 (351)
Q Consensus 321 ~~ll~~aGf~~v~~~~ 336 (351)
.++++++||++++...
T Consensus 218 ~~~l~~aGf~~~~~~~ 233 (297)
T 2o57_A 218 RSLAKECGLVTLRTFS 233 (297)
T ss_dssp HHHHHHTTEEEEEEEE
T ss_pred HHHHHHCCCeEEEEEE
Confidence 9999999999988654
No 11
>3ujc_A Phosphoethanolamine N-methyltransferase; parasite; HET: PC; 1.19A {Plasmodium falciparum} PDB: 3uj9_A* 3uj6_A* 3uj7_A* 3uj8_A* 3uja_A 3ujb_A* 4fgz_A* 3ujd_A*
Probab=99.89 E-value=1e-21 Score=176.41 Aligned_cols=163 Identities=16% Similarity=0.188 Sum_probs=133.4
Q ss_pred HHHHHHHHhccCCCCCCeEEEEcCccCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHhhhCCCCCCCeEEEEecCCCC
Q 018740 163 EKEFELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRL 242 (351)
Q Consensus 163 ~~~~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~g~~~~~i~~~~~d~~~l 242 (351)
....+.+...+...++.+|||||||+|.++..+++.. ..+|+|+|+|+.+++.++++.... .++.++.+|+.++
T Consensus 41 ~~~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~-~~~v~~vD~s~~~~~~a~~~~~~~-----~~~~~~~~d~~~~ 114 (266)
T 3ujc_A 41 LEATKKILSDIELNENSKVLDIGSGLGGGCMYINEKY-GAHTHGIDICSNIVNMANERVSGN-----NKIIFEANDILTK 114 (266)
T ss_dssp HHHHHHHTTTCCCCTTCEEEEETCTTSHHHHHHHHHH-CCEEEEEESCHHHHHHHHHTCCSC-----TTEEEEECCTTTC
T ss_pred HHHHHHHHHhcCCCCCCEEEEECCCCCHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHhhcC-----CCeEEEECccccC
Confidence 4456677777777788899999999999999999974 349999999999999999874332 6899999999999
Q ss_pred CCCCCceeeEEeccccccC--CChHHHHHHHHhcccCCcEEEEEeeccCCCCCcchHHHHHHHHHhhccCCccCCCHHHH
Q 018740 243 PFASSSIDAVHAGAAIHCW--SSPSTGVAEISRVLRPGGVFVGTTYIVDGPFNLIPFSRLLRQNMMQISGSYTFLSEREI 320 (351)
Q Consensus 243 p~~~~~fD~V~~~~vl~h~--~d~~~~l~~i~~~LkpgG~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~l 320 (351)
|+++++||+|++..+++|+ .++..+++++.++|||||.+++.++............. ..... .+..+++.+++
T Consensus 115 ~~~~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~---~~~~~--~~~~~~~~~~~ 189 (266)
T 3ujc_A 115 EFPENNFDLIYSRDAILALSLENKNKLFQKCYKWLKPTGTLLITDYCATEKENWDDEFK---EYVKQ--RKYTLITVEEY 189 (266)
T ss_dssp CCCTTCEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEEESCGGGCCHHHH---HHHHH--HTCCCCCHHHH
T ss_pred CCCCCcEEEEeHHHHHHhcChHHHHHHHHHHHHHcCCCCEEEEEEeccCCcccchHHHH---HHHhc--CCCCCCCHHHH
Confidence 9889999999999999999 78899999999999999999999987654222222222 21111 25568899999
Q ss_pred HHHHHHCCCeEEEEEe
Q 018740 321 EDLCRACGLVDFKCTR 336 (351)
Q Consensus 321 ~~ll~~aGf~~v~~~~ 336 (351)
.++++++||++++...
T Consensus 190 ~~~l~~~Gf~~~~~~~ 205 (266)
T 3ujc_A 190 ADILTACNFKNVVSKD 205 (266)
T ss_dssp HHHHHHTTCEEEEEEE
T ss_pred HHHHHHcCCeEEEEEe
Confidence 9999999999988654
No 12
>1nkv_A Hypothetical protein YJHP; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.90A {Escherichia coli} SCOP: c.66.1.21
Probab=99.88 E-value=1.2e-21 Score=175.15 Aligned_cols=164 Identities=15% Similarity=0.129 Sum_probs=133.0
Q ss_pred HHHHHHHHhccCCCCCCeEEEEcCccCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHhhhCCCCCCCeEEEEecCCCC
Q 018740 163 EKEFELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRL 242 (351)
Q Consensus 163 ~~~~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~g~~~~~i~~~~~d~~~l 242 (351)
....+.+...+...++.+|||||||+|.++..+++.. ..+|+|+|+|+.+++.+++++... |. ..++.++++|+.++
T Consensus 22 ~~~~~~l~~~~~~~~~~~VLDiGcG~G~~~~~la~~~-~~~v~gvD~s~~~l~~a~~~~~~~-~~-~~~v~~~~~d~~~~ 98 (256)
T 1nkv_A 22 EEKYATLGRVLRMKPGTRILDLGSGSGEMLCTWARDH-GITGTGIDMSSLFTAQAKRRAEEL-GV-SERVHFIHNDAAGY 98 (256)
T ss_dssp HHHHHHHHHHTCCCTTCEEEEETCTTCHHHHHHHHHT-CCEEEEEESCHHHHHHHHHHHHHT-TC-TTTEEEEESCCTTC
T ss_pred HHHHHHHHHhcCCCCCCEEEEECCCCCHHHHHHHHhc-CCeEEEEeCCHHHHHHHHHHHHhc-CC-CcceEEEECChHhC
Confidence 4456677777777788999999999999999999875 349999999999999999988765 22 35899999999998
Q ss_pred CCCCCceeeEEeccccccCCChHHHHHHHHhcccCCcEEEEEeeccCCCCCcchHHHHHHHHHhhccCCccCCCHHHHHH
Q 018740 243 PFASSSIDAVHAGAAIHCWSSPSTGVAEISRVLRPGGVFVGTTYIVDGPFNLIPFSRLLRQNMMQISGSYTFLSEREIED 322 (351)
Q Consensus 243 p~~~~~fD~V~~~~vl~h~~d~~~~l~~i~~~LkpgG~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~~ 322 (351)
++ +++||+|++..+++|++++..+|++++++|||||.+++.++.......... +...+. ...+..+++.+++.+
T Consensus 99 ~~-~~~fD~V~~~~~~~~~~~~~~~l~~~~r~LkpgG~l~~~~~~~~~~~~~~~----~~~~~~-~~~~~~~~~~~~~~~ 172 (256)
T 1nkv_A 99 VA-NEKCDVAACVGATWIAGGFAGAEELLAQSLKPGGIMLIGEPYWRQLPATEE----IAQACG-VSSTSDFLTLPGLVG 172 (256)
T ss_dssp CC-SSCEEEEEEESCGGGTSSSHHHHHHHTTSEEEEEEEEEEEEEETTCCSSHH----HHHTTT-CSCGGGSCCHHHHHH
T ss_pred Cc-CCCCCEEEECCChHhcCCHHHHHHHHHHHcCCCeEEEEecCcccCCCChHH----HHHHHh-cccccccCCHHHHHH
Confidence 87 789999999999999999999999999999999999999876543221111 111111 223456889999999
Q ss_pred HHHHCCCeEEEEE
Q 018740 323 LCRACGLVDFKCT 335 (351)
Q Consensus 323 ll~~aGf~~v~~~ 335 (351)
+++++||++++..
T Consensus 173 ~l~~aGf~~~~~~ 185 (256)
T 1nkv_A 173 AFDDLGYDVVEMV 185 (256)
T ss_dssp HHHTTTBCCCEEE
T ss_pred HHHHCCCeeEEEE
Confidence 9999999987754
No 13
>3f4k_A Putative methyltransferase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacteroides thetaiotaomicron} PDB: 3t0i_A* 3svz_A* 3sxj_A*
Probab=99.88 E-value=5e-21 Score=171.30 Aligned_cols=165 Identities=14% Similarity=0.137 Sum_probs=131.2
Q ss_pred cHHHHHHHHhcc-CCCCCCeEEEEcCccCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHhhhCCCCCCCeEEEEecCC
Q 018740 162 PEKEFELMKGYL-KPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADIS 240 (351)
Q Consensus 162 ~~~~~~~l~~~l-~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~g~~~~~i~~~~~d~~ 240 (351)
.......+...+ ...++.+|||||||+|.++..+++.++ .+|+|+|+|+.+++.+++++... |. ..++.++++|+.
T Consensus 30 ~~~~~~~~l~~l~~~~~~~~vLDiG~G~G~~~~~l~~~~~-~~v~~vD~s~~~~~~a~~~~~~~-~~-~~~~~~~~~d~~ 106 (257)
T 3f4k_A 30 SPEATRKAVSFINELTDDAKIADIGCGTGGQTLFLADYVK-GQITGIDLFPDFIEIFNENAVKA-NC-ADRVKGITGSMD 106 (257)
T ss_dssp CHHHHHHHHTTSCCCCTTCEEEEETCTTSHHHHHHHHHCC-SEEEEEESCHHHHHHHHHHHHHT-TC-TTTEEEEECCTT
T ss_pred CHHHHHHHHHHHhcCCCCCeEEEeCCCCCHHHHHHHHhCC-CeEEEEECCHHHHHHHHHHHHHc-CC-CCceEEEECChh
Confidence 344455566665 455678999999999999999999975 49999999999999999998776 22 345999999999
Q ss_pred CCCCCCCceeeEEeccccccCCChHHHHHHHHhcccCCcEEEEEeeccCCCCCcchHHHHHHHHHhhccCCccCCCHHHH
Q 018740 241 RLPFASSSIDAVHAGAAIHCWSSPSTGVAEISRVLRPGGVFVGTTYIVDGPFNLIPFSRLLRQNMMQISGSYTFLSEREI 320 (351)
Q Consensus 241 ~lp~~~~~fD~V~~~~vl~h~~d~~~~l~~i~~~LkpgG~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~l 320 (351)
++|+++++||+|++..+++|+ ++..+++++.++|+|||++++.++..............+.. . ....++.+++
T Consensus 107 ~~~~~~~~fD~v~~~~~l~~~-~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~---~---~~~~~~~~~~ 179 (257)
T 3f4k_A 107 NLPFQNEELDLIWSEGAIYNI-GFERGMNEWSKYLKKGGFIAVSEASWFTSERPAEIEDFWMD---A---YPEISVIPTC 179 (257)
T ss_dssp SCSSCTTCEEEEEEESCSCCC-CHHHHHHHHHTTEEEEEEEEEEEEEESSSCCCHHHHHHHHH---H---CTTCCBHHHH
T ss_pred hCCCCCCCEEEEEecChHhhc-CHHHHHHHHHHHcCCCcEEEEEEeeccCCCChHHHHHHHHH---h---CCCCCCHHHH
Confidence 999889999999999999999 89999999999999999999999764332222222221211 1 2236789999
Q ss_pred HHHHHHCCCeEEEEEe
Q 018740 321 EDLCRACGLVDFKCTR 336 (351)
Q Consensus 321 ~~ll~~aGf~~v~~~~ 336 (351)
.++++++||++++...
T Consensus 180 ~~~l~~aGf~~v~~~~ 195 (257)
T 3f4k_A 180 IDKMERAGYTPTAHFI 195 (257)
T ss_dssp HHHHHHTTEEEEEEEE
T ss_pred HHHHHHCCCeEEEEEE
Confidence 9999999999988553
No 14
>3kkz_A Uncharacterized protein Q5LES9; putative methyltransferase, BFR250, NESG, structural genomics, PSI-2; HET: SAM; 1.68A {Bacteroides fragilis nctc 9343} PDB: 3e7p_A 3t7s_A* 3t7r_A* 3t7t_A*
Probab=99.88 E-value=3.6e-21 Score=173.48 Aligned_cols=164 Identities=13% Similarity=0.134 Sum_probs=131.6
Q ss_pred HHHHHHHHhccC-CCCCCeEEEEcCccCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHhhhCCCCCCCeEEEEecCCC
Q 018740 163 EKEFELMKGYLK-PVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISR 241 (351)
Q Consensus 163 ~~~~~~l~~~l~-~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~g~~~~~i~~~~~d~~~ 241 (351)
......+...+. ..++.+|||||||+|.++..+++. +..+|+|+|+|+.+++.+++++... |. .+++.++.+|+.+
T Consensus 31 ~~~~~~~l~~l~~~~~~~~vLDiGcG~G~~~~~la~~-~~~~v~gvD~s~~~~~~a~~~~~~~-~~-~~~v~~~~~d~~~ 107 (267)
T 3kkz_A 31 PEVTLKALSFIDNLTEKSLIADIGCGTGGQTMVLAGH-VTGQVTGLDFLSGFIDIFNRNARQS-GL-QNRVTGIVGSMDD 107 (267)
T ss_dssp HHHHHHHHTTCCCCCTTCEEEEETCTTCHHHHHHHTT-CSSEEEEEESCHHHHHHHHHHHHHT-TC-TTTEEEEECCTTS
T ss_pred HHHHHHHHHhcccCCCCCEEEEeCCCCCHHHHHHHhc-cCCEEEEEeCCHHHHHHHHHHHHHc-CC-CcCcEEEEcChhh
Confidence 444555666665 566889999999999999999998 4569999999999999999998776 22 3579999999999
Q ss_pred CCCCCCceeeEEeccccccCCChHHHHHHHHhcccCCcEEEEEeeccCCCCCcchHHHHHHHHHhhccCCccCCCHHHHH
Q 018740 242 LPFASSSIDAVHAGAAIHCWSSPSTGVAEISRVLRPGGVFVGTTYIVDGPFNLIPFSRLLRQNMMQISGSYTFLSEREIE 321 (351)
Q Consensus 242 lp~~~~~fD~V~~~~vl~h~~d~~~~l~~i~~~LkpgG~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~ 321 (351)
+|+++++||+|++..+++|+ ++..+++++.++|||||++++.++..............+. .. ...+.+.+++.
T Consensus 108 ~~~~~~~fD~i~~~~~~~~~-~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~---~~---~~~~~~~~~~~ 180 (267)
T 3kkz_A 108 LPFRNEELDLIWSEGAIYNI-GFERGLNEWRKYLKKGGYLAVSECSWFTDERPAEINDFWM---DA---YPEIDTIPNQV 180 (267)
T ss_dssp CCCCTTCEEEEEESSCGGGT-CHHHHHHHHGGGEEEEEEEEEEEEEESSSCCCHHHHHHHH---HH---CTTCEEHHHHH
T ss_pred CCCCCCCEEEEEEcCCceec-CHHHHHHHHHHHcCCCCEEEEEEeeecCCCChHHHHHHHH---Hh---CCCCCCHHHHH
Confidence 99888999999999999999 8999999999999999999999987533222222211111 11 22567899999
Q ss_pred HHHHHCCCeEEEEEe
Q 018740 322 DLCRACGLVDFKCTR 336 (351)
Q Consensus 322 ~ll~~aGf~~v~~~~ 336 (351)
++++++||++++...
T Consensus 181 ~~l~~aGf~~v~~~~ 195 (267)
T 3kkz_A 181 AKIHKAGYLPVATFI 195 (267)
T ss_dssp HHHHHTTEEEEEEEE
T ss_pred HHHHHCCCEEEEEEE
Confidence 999999999988654
No 15
>3vc1_A Geranyl diphosphate 2-C-methyltransferase; rossmann fold, methyltransferase fold, SAM-dependent methyltransferase; HET: SAH GST GOL; 1.82A {Streptomyces coelicolor} PDB: 3vc2_A* 4f84_A* 4f85_A 4f86_A*
Probab=99.88 E-value=5.4e-21 Score=176.45 Aligned_cols=162 Identities=16% Similarity=0.154 Sum_probs=133.0
Q ss_pred HHHHHhccC-CCCCCeEEEEcCccCHHHHHHHHh-CCCCeEEEEeCCHHHHHHHHHHHhhhCCCCCCCeEEEEecCCCCC
Q 018740 166 FELMKGYLK-PVLGGNIIDASCGSGLFSRIFAKS-GLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLP 243 (351)
Q Consensus 166 ~~~l~~~l~-~~~~~~vLDiGcG~G~~~~~l~~~-~~~~~v~gvD~s~~~~~~a~~~~~~~~g~~~~~i~~~~~d~~~lp 243 (351)
.+.+.+.+. ..++.+|||+|||+|.++..+++. +. +|+|+|+|+.+++.|++++... |. ..++.++.+|+.++|
T Consensus 105 ~~~l~~~l~~~~~~~~vLDiGcG~G~~~~~la~~~~~--~v~gvD~s~~~~~~a~~~~~~~-~~-~~~v~~~~~d~~~~~ 180 (312)
T 3vc1_A 105 AEFLMDHLGQAGPDDTLVDAGCGRGGSMVMAHRRFGS--RVEGVTLSAAQADFGNRRAREL-RI-DDHVRSRVCNMLDTP 180 (312)
T ss_dssp HHHHHTTSCCCCTTCEEEEESCTTSHHHHHHHHHHCC--EEEEEESCHHHHHHHHHHHHHT-TC-TTTEEEEECCTTSCC
T ss_pred HHHHHHHhccCCCCCEEEEecCCCCHHHHHHHHHcCC--EEEEEeCCHHHHHHHHHHHHHc-CC-CCceEEEECChhcCC
Confidence 345667776 667889999999999999999988 54 9999999999999999998876 22 357999999999999
Q ss_pred CCCCceeeEEeccccccCCChHHHHHHHHhcccCCcEEEEEeeccCCCC-CcchHHHHHHHHHhhccCCccCCCHHHHHH
Q 018740 244 FASSSIDAVHAGAAIHCWSSPSTGVAEISRVLRPGGVFVGTTYIVDGPF-NLIPFSRLLRQNMMQISGSYTFLSEREIED 322 (351)
Q Consensus 244 ~~~~~fD~V~~~~vl~h~~d~~~~l~~i~~~LkpgG~li~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~s~~~l~~ 322 (351)
+++++||+|++..+++|+ ++..+|+++.++|||||++++.++...... ........+...+ ...+++.+++.+
T Consensus 181 ~~~~~fD~V~~~~~l~~~-~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~s~~~~~~ 254 (312)
T 3vc1_A 181 FDKGAVTASWNNESTMYV-DLHDLFSEHSRFLKVGGRYVTITGCWNPRYGQPSKWVSQINAHF-----ECNIHSRREYLR 254 (312)
T ss_dssp CCTTCEEEEEEESCGGGS-CHHHHHHHHHHHEEEEEEEEEEEEEECTTTCSCCHHHHHHHHHH-----TCCCCBHHHHHH
T ss_pred CCCCCEeEEEECCchhhC-CHHHHHHHHHHHcCCCcEEEEEEccccccccchhHHHHHHHhhh-----cCCCCCHHHHHH
Confidence 888999999999999999 699999999999999999999998776533 2233333332222 224789999999
Q ss_pred HHHHCCCeEEEEEec
Q 018740 323 LCRACGLVDFKCTRN 337 (351)
Q Consensus 323 ll~~aGf~~v~~~~~ 337 (351)
+++++||++++....
T Consensus 255 ~l~~aGf~~~~~~~~ 269 (312)
T 3vc1_A 255 AMADNRLVPHTIVDL 269 (312)
T ss_dssp HHHTTTEEEEEEEEC
T ss_pred HHHHCCCEEEEEEeC
Confidence 999999999886543
No 16
>3mgg_A Methyltransferase; NYSGXRC, PSI-II, protein structure initiative, structural genomics, NEW YORK SGX research center for structural genomics; 1.86A {Methanosarcina mazei}
Probab=99.87 E-value=2.8e-21 Score=174.90 Aligned_cols=167 Identities=20% Similarity=0.268 Sum_probs=132.0
Q ss_pred HHHHhccCCCCCCeEEEEcCccCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHhhhCCCCCCCeEEEEecCCCCCCCC
Q 018740 167 ELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLPFAS 246 (351)
Q Consensus 167 ~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~g~~~~~i~~~~~d~~~lp~~~ 246 (351)
+.+.......++.+|||||||+|.++..+++.++..+++|+|+|+.+++.+++++... ..+++.++.+|+..+++++
T Consensus 27 ~~l~~~~~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~---~~~~~~~~~~d~~~~~~~~ 103 (276)
T 3mgg_A 27 KLLHHDTVYPPGAKVLEAGCGIGAQTVILAKNNPDAEITSIDISPESLEKARENTEKN---GIKNVKFLQANIFSLPFED 103 (276)
T ss_dssp HHHHTTCCCCTTCEEEETTCTTSHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHT---TCCSEEEEECCGGGCCSCT
T ss_pred HHHhhcccCCCCCeEEEecCCCCHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHc---CCCCcEEEEcccccCCCCC
Confidence 4444555556788999999999999999999987789999999999999999998776 2468999999999999889
Q ss_pred CceeeEEeccccccCCChHHHHHHHHhcccCCcEEEEEeeccCCCC--CcchHHHHHHHHHhh--ccCCccCCCHHHHHH
Q 018740 247 SSIDAVHAGAAIHCWSSPSTGVAEISRVLRPGGVFVGTTYIVDGPF--NLIPFSRLLRQNMMQ--ISGSYTFLSEREIED 322 (351)
Q Consensus 247 ~~fD~V~~~~vl~h~~d~~~~l~~i~~~LkpgG~li~~~~~~~~~~--~~~~~~~~~~~~~~~--~~~~~~~~s~~~l~~ 322 (351)
++||+|++..+++|++++..+++++.++|+|||++++.++...... +..+........... ...+...++.+++..
T Consensus 104 ~~fD~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 183 (276)
T 3mgg_A 104 SSFDHIFVCFVLEHLQSPEEALKSLKKVLKPGGTITVIEGDHGSCYFHPEGKKAIEAWNCLIRVQAYMKGNSLVGRQIYP 183 (276)
T ss_dssp TCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEEECGGGCEEESCCHHHHHHHHHHHHHHHHTTCCTTGGGGHHH
T ss_pred CCeeEEEEechhhhcCCHHHHHHHHHHHcCCCcEEEEEEcCCCCceECCCcHHHHHHHHHHHHHHHhcCCCcchHHHHHH
Confidence 9999999999999999999999999999999999999887653221 112222222111111 122345567889999
Q ss_pred HHHHCCCeEEEEEe
Q 018740 323 LCRACGLVDFKCTR 336 (351)
Q Consensus 323 ll~~aGf~~v~~~~ 336 (351)
+|+++||++++...
T Consensus 184 ~l~~aGf~~v~~~~ 197 (276)
T 3mgg_A 184 LLQESGFEKIRVEP 197 (276)
T ss_dssp HHHHTTCEEEEEEE
T ss_pred HHHHCCCCeEEEee
Confidence 99999999988653
No 17
>1p91_A Ribosomal RNA large subunit methyltransferase A; RLMA, RRMA, 23S rRNA, NESG, structural genomics, PSI, protein structure initiative; HET: SAM; 2.80A {Escherichia coli} SCOP: c.66.1.33
Probab=99.87 E-value=1.6e-21 Score=176.05 Aligned_cols=176 Identities=22% Similarity=0.351 Sum_probs=128.5
Q ss_pred eeCCCCCCCcccccCCCcccccccCCccccccccccccccCceeeecccCCCCC--ccccCccchhhhcCChhhhhhhhh
Q 018740 72 LACPICYKPLTWIGDSSLSIESAAGSSLQCNTCKKTYSGVGTHFDMTAASGSKD--YGELMSPATEFFRMPFMSFIYERG 149 (351)
Q Consensus 72 l~CP~C~~~l~~~~~~~~~~~~~~~~~~~C~~C~~~~~~~~g~~~~~~~~~~~~--y~~~~~~~~~~~~~~~~~~~~~~~ 149 (351)
+.||.|+..+.... +.++|++|+.++...+||++++....... ..+... .+.
T Consensus 3 ~~Cp~C~~~~~~~~-----------~~~~C~~~~~~~~~~~Gy~~~~~~~~~~~~~~~~~~~----~~~----------- 56 (269)
T 1p91_A 3 FSCPLCHQPLSREK-----------NSYICPQRHQFDMAKEGYVNLLPVQHKRSRDPGDSAE----MMQ----------- 56 (269)
T ss_dssp BBCTTTCCBCEEET-----------TEEECTTCCEEEBCTTSCEECSCSSSSCSCCCSSSHH----HHH-----------
T ss_pred ccCCCCCccceeCC-----------CEEECCCCCcCCcCCCEEEEeecccccCCCCCCCCHH----HHH-----------
Confidence 78999999876533 57999999999999999999876533211 111100 100
Q ss_pred hhhhhhcCCCCCc--HHHHHHHHhccCCCCCCeEEEEcCccCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHhhhCCC
Q 018740 150 WRQNFVWGGFPGP--EKEFELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNF 227 (351)
Q Consensus 150 ~r~~~~~~~~~~~--~~~~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~g~ 227 (351)
.+..+...+++.+ ....+.+...+. .++.+|||||||+|.++..+++..+..+|+|+|+|+.+++.|+++
T Consensus 57 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~------- 128 (269)
T 1p91_A 57 ARRAFLDAGHYQPLRDAIVAQLRERLD-DKATAVLDIGCGEGYYTHAFADALPEITTFGLDVSKVAIKAAAKR------- 128 (269)
T ss_dssp HHHHHHTTTTTHHHHHHHHHHHHHHSC-TTCCEEEEETCTTSTTHHHHHHTCTTSEEEEEESCHHHHHHHHHH-------
T ss_pred HHHHHHhCCCcHHHHHHHHHHHHHhcC-CCCCEEEEECCCCCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHh-------
Confidence 0122222333221 122333444332 457799999999999999999985556999999999999999886
Q ss_pred CCCCeEEEEecCCCCCCCCCceeeEEeccccccCCChHHHHHHHHhcccCCcEEEEEeeccC
Q 018740 228 PKENFLLVRADISRLPFASSSIDAVHAGAAIHCWSSPSTGVAEISRVLRPGGVFVGTTYIVD 289 (351)
Q Consensus 228 ~~~~i~~~~~d~~~lp~~~~~fD~V~~~~vl~h~~d~~~~l~~i~~~LkpgG~li~~~~~~~ 289 (351)
..++.+..+|+.++|+++++||+|++..+.+ .++++.++|+|||.+++.++..+
T Consensus 129 -~~~~~~~~~d~~~~~~~~~~fD~v~~~~~~~-------~l~~~~~~L~pgG~l~~~~~~~~ 182 (269)
T 1p91_A 129 -YPQVTFCVASSHRLPFSDTSMDAIIRIYAPC-------KAEELARVVKPGGWVITATPGPR 182 (269)
T ss_dssp -CTTSEEEECCTTSCSBCTTCEEEEEEESCCC-------CHHHHHHHEEEEEEEEEEEECTT
T ss_pred -CCCcEEEEcchhhCCCCCCceeEEEEeCChh-------hHHHHHHhcCCCcEEEEEEcCHH
Confidence 4678999999999998889999999876633 48999999999999999998764
No 18
>2p7i_A Hypothetical protein; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; 1.74A {Pectobacterium atrosepticum SCRI1043} SCOP: c.66.1.41 PDB: 2p7h_A
Probab=99.87 E-value=3.9e-21 Score=170.65 Aligned_cols=146 Identities=11% Similarity=0.059 Sum_probs=118.2
Q ss_pred CCCeEEEEcCccCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHhhhCCCCCCCeEEEEecCCCCCCCCCceeeEEecc
Q 018740 177 LGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLPFASSSIDAVHAGA 256 (351)
Q Consensus 177 ~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~g~~~~~i~~~~~d~~~lp~~~~~fD~V~~~~ 256 (351)
++.+|||||||+|.++..+++.++ +|+|+|+|+.+++.|++++. .++.++++|+.++ +++++||+|++.+
T Consensus 42 ~~~~vLDiGcG~G~~~~~l~~~~~--~v~gvD~s~~~~~~a~~~~~-------~~v~~~~~d~~~~-~~~~~fD~v~~~~ 111 (250)
T 2p7i_A 42 RPGNLLELGSFKGDFTSRLQEHFN--DITCVEASEEAISHAQGRLK-------DGITYIHSRFEDA-QLPRRYDNIVLTH 111 (250)
T ss_dssp CSSCEEEESCTTSHHHHHHTTTCS--CEEEEESCHHHHHHHHHHSC-------SCEEEEESCGGGC-CCSSCEEEEEEES
T ss_pred CCCcEEEECCCCCHHHHHHHHhCC--cEEEEeCCHHHHHHHHHhhh-------CCeEEEEccHHHc-CcCCcccEEEEhh
Confidence 467899999999999999999887 89999999999999998731 2799999999887 4678999999999
Q ss_pred ccccCCChHHHHHHHH-hcccCCcEEEEEeeccCCCCCcchHHHHHHHH---------HhhccCCccCCCHHHHHHHHHH
Q 018740 257 AIHCWSSPSTGVAEIS-RVLRPGGVFVGTTYIVDGPFNLIPFSRLLRQN---------MMQISGSYTFLSEREIEDLCRA 326 (351)
Q Consensus 257 vl~h~~d~~~~l~~i~-~~LkpgG~li~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~s~~~l~~ll~~ 326 (351)
++||++|+..+|+++. ++|||||.+++.+++.... .......... ......|..+++.+++.+++++
T Consensus 112 ~l~~~~~~~~~l~~~~~~~LkpgG~l~i~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 188 (250)
T 2p7i_A 112 VLEHIDDPVALLKRINDDWLAEGGRLFLVCPNANAV---SRQIAVKMGIISHNSAVTEAEFAHGHRCTYALDTLERDASR 188 (250)
T ss_dssp CGGGCSSHHHHHHHHHHTTEEEEEEEEEEEECTTCH---HHHHHHHTTSSSSTTCCCHHHHHTTCCCCCCHHHHHHHHHH
T ss_pred HHHhhcCHHHHHHHHHHHhcCCCCEEEEEcCChHHH---HHHHHHHcCccccchhcccccccccccccCCHHHHHHHHHH
Confidence 9999999999999999 9999999999999875421 0000000000 0012346678999999999999
Q ss_pred CCCeEEEEE
Q 018740 327 CGLVDFKCT 335 (351)
Q Consensus 327 aGf~~v~~~ 335 (351)
+||++++..
T Consensus 189 ~Gf~~~~~~ 197 (250)
T 2p7i_A 189 AGLQVTYRS 197 (250)
T ss_dssp TTCEEEEEE
T ss_pred CCCeEEEEe
Confidence 999988754
No 19
>3l8d_A Methyltransferase; structural genomics, PSI, nysgrc, protein structure initiative, NEW YORK SGX research center for STRU genomics; 1.70A {Bacillus thuringiensis}
Probab=99.87 E-value=3.8e-21 Score=170.47 Aligned_cols=156 Identities=20% Similarity=0.302 Sum_probs=127.6
Q ss_pred HHHHHHhccCCCCCCeEEEEcCccCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHhhhCCCCCCCeEEEEecCCCCCC
Q 018740 165 EFELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLPF 244 (351)
Q Consensus 165 ~~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~g~~~~~i~~~~~d~~~lp~ 244 (351)
..+.+...+. ++.+|||||||+|.++..+++.+. +|+|+|+|+.+++.++++. ...++.++++|+.++++
T Consensus 43 ~~~~l~~~~~--~~~~vLDiG~G~G~~~~~l~~~~~--~v~~vD~s~~~~~~a~~~~------~~~~~~~~~~d~~~~~~ 112 (242)
T 3l8d_A 43 IIPFFEQYVK--KEAEVLDVGCGDGYGTYKLSRTGY--KAVGVDISEVMIQKGKERG------EGPDLSFIKGDLSSLPF 112 (242)
T ss_dssp HHHHHHHHSC--TTCEEEEETCTTSHHHHHHHHTTC--EEEEEESCHHHHHHHHTTT------CBTTEEEEECBTTBCSS
T ss_pred HHHHHHHHcC--CCCeEEEEcCCCCHHHHHHHHcCC--eEEEEECCHHHHHHHHhhc------ccCCceEEEcchhcCCC
Confidence 3455666655 477999999999999999999865 9999999999999998863 14789999999999998
Q ss_pred CCCceeeEEeccccccCCChHHHHHHHHhcccCCcEEEEEeeccCCCCCcchHHHHHHHHHhhccCCccCCCHHHHHHHH
Q 018740 245 ASSSIDAVHAGAAIHCWSSPSTGVAEISRVLRPGGVFVGTTYIVDGPFNLIPFSRLLRQNMMQISGSYTFLSEREIEDLC 324 (351)
Q Consensus 245 ~~~~fD~V~~~~vl~h~~d~~~~l~~i~~~LkpgG~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~~ll 324 (351)
++++||+|++..+++|++++..+++++.++|+|||.+++.++..........+ ........+...++.+++.+++
T Consensus 113 ~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~l 187 (242)
T 3l8d_A 113 ENEQFEAIMAINSLEWTEEPLRALNEIKRVLKSDGYACIAILGPTAKPRENSY-----PRLYGKDVVCNTMMPWEFEQLV 187 (242)
T ss_dssp CTTCEEEEEEESCTTSSSCHHHHHHHHHHHEEEEEEEEEEEECTTCGGGGGGG-----GGGGTCCCSSCCCCHHHHHHHH
T ss_pred CCCCccEEEEcChHhhccCHHHHHHHHHHHhCCCeEEEEEEcCCcchhhhhhh-----hhhccccccccCCCHHHHHHHH
Confidence 89999999999999999999999999999999999999999765432111111 1112233356778999999999
Q ss_pred HHCCCeEEEEE
Q 018740 325 RACGLVDFKCT 335 (351)
Q Consensus 325 ~~aGf~~v~~~ 335 (351)
+++||++++..
T Consensus 188 ~~~Gf~~~~~~ 198 (242)
T 3l8d_A 188 KEQGFKVVDGI 198 (242)
T ss_dssp HHTTEEEEEEE
T ss_pred HHcCCEEEEee
Confidence 99999998854
No 20
>3ccf_A Cyclopropane-fatty-acyl-phospholipid synthase; YP_321342.1, putative methyltransferase; 1.90A {Anabaena variabilis atcc 29413}
Probab=99.87 E-value=1.7e-21 Score=176.81 Aligned_cols=154 Identities=23% Similarity=0.299 Sum_probs=123.5
Q ss_pred HHHhccCCCCCCeEEEEcCccCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHhhhCCCCCCCeEEEEecCCCCCCCCC
Q 018740 168 LMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLPFASS 247 (351)
Q Consensus 168 ~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~g~~~~~i~~~~~d~~~lp~~~~ 247 (351)
.+...+...++.+|||||||+|.++..+++.+ .+|+|+|+|+.|++.++++ .+++.+..+|+..+|+ ++
T Consensus 48 ~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~--~~v~gvD~s~~~~~~a~~~--------~~~~~~~~~d~~~~~~-~~ 116 (279)
T 3ccf_A 48 DLLQLLNPQPGEFILDLGCGTGQLTEKIAQSG--AEVLGTDNAATMIEKARQN--------YPHLHFDVADARNFRV-DK 116 (279)
T ss_dssp HHHHHHCCCTTCEEEEETCTTSHHHHHHHHTT--CEEEEEESCHHHHHHHHHH--------CTTSCEEECCTTTCCC-SS
T ss_pred HHHHHhCCCCCCEEEEecCCCCHHHHHHHhCC--CeEEEEECCHHHHHHHHhh--------CCCCEEEECChhhCCc-CC
Confidence 34455566678899999999999999999854 4999999999999999886 3678899999999987 57
Q ss_pred ceeeEEeccccccCCChHHHHHHHHhcccCCcEEEEEeeccCCCCCcchHHHHHHHHHh-------hccCCccCCCHHHH
Q 018740 248 SIDAVHAGAAIHCWSSPSTGVAEISRVLRPGGVFVGTTYIVDGPFNLIPFSRLLRQNMM-------QISGSYTFLSEREI 320 (351)
Q Consensus 248 ~fD~V~~~~vl~h~~d~~~~l~~i~~~LkpgG~li~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~s~~~l 320 (351)
+||+|++..+++|++|+..+++++.++|+|||++++.++..+.. ..+...+..... ....+..+++.+++
T Consensus 117 ~fD~v~~~~~l~~~~d~~~~l~~~~~~LkpgG~l~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (279)
T 3ccf_A 117 PLDAVFSNAMLHWVKEPEAAIASIHQALKSGGRFVAEFGGKGNI---KYILEALYNALETLGIHNPQALNPWYFPSIGEY 193 (279)
T ss_dssp CEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEEECTTTT---HHHHHHHHHHHHHHTCCCGGGGCCCCCCCHHHH
T ss_pred CcCEEEEcchhhhCcCHHHHHHHHHHhcCCCcEEEEEecCCcch---HHHHHHHHHHHHhcCCccccCcCceeCCCHHHH
Confidence 89999999999999999999999999999999999988865421 122222221111 12234567899999
Q ss_pred HHHHHHCCCeEEEEE
Q 018740 321 EDLCRACGLVDFKCT 335 (351)
Q Consensus 321 ~~ll~~aGf~~v~~~ 335 (351)
.++|+++||++++..
T Consensus 194 ~~~l~~aGf~~~~~~ 208 (279)
T 3ccf_A 194 VNILEKQGFDVTYAA 208 (279)
T ss_dssp HHHHHHHTEEEEEEE
T ss_pred HHHHHHcCCEEEEEE
Confidence 999999999988754
No 21
>3h2b_A SAM-dependent methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=99.87 E-value=2.3e-21 Score=167.39 Aligned_cols=138 Identities=11% Similarity=0.122 Sum_probs=119.2
Q ss_pred CCeEEEEcCccCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHhhhCCCCCCCeEEEEecCCCCCCCCCceeeEEeccc
Q 018740 178 GGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLPFASSSIDAVHAGAA 257 (351)
Q Consensus 178 ~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~g~~~~~i~~~~~d~~~lp~~~~~fD~V~~~~v 257 (351)
+.+|||+|||+|.++..+++.+. +++|+|+|+.+++.++++ .+++.++++|+.++++++++||+|++..+
T Consensus 42 ~~~vLDiGcG~G~~~~~l~~~~~--~v~gvD~s~~~~~~a~~~--------~~~~~~~~~d~~~~~~~~~~fD~v~~~~~ 111 (203)
T 3h2b_A 42 DGVILDVGSGTGRWTGHLASLGH--QIEGLEPATRLVELARQT--------HPSVTFHHGTITDLSDSPKRWAGLLAWYS 111 (203)
T ss_dssp CSCEEEETCTTCHHHHHHHHTTC--CEEEECCCHHHHHHHHHH--------CTTSEEECCCGGGGGGSCCCEEEEEEESS
T ss_pred CCeEEEecCCCCHHHHHHHhcCC--eEEEEeCCHHHHHHHHHh--------CCCCeEEeCcccccccCCCCeEEEEehhh
Confidence 67999999999999999999866 999999999999999986 46899999999999988899999999999
Q ss_pred cccCC--ChHHHHHHHHhcccCCcEEEEEeeccCCCCCcchHHHHHHHHHhhccCCccCCCHHHHHHHHHHCCCeEEEEE
Q 018740 258 IHCWS--SPSTGVAEISRVLRPGGVFVGTTYIVDGPFNLIPFSRLLRQNMMQISGSYTFLSEREIEDLCRACGLVDFKCT 335 (351)
Q Consensus 258 l~h~~--d~~~~l~~i~~~LkpgG~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~~ll~~aGf~~v~~~ 335 (351)
++|++ ++..+|+++.++|+|||.+++.++........ .....+..+++.+++.++++++||++++..
T Consensus 112 l~~~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~ 180 (203)
T 3h2b_A 112 LIHMGPGELPDALVALRMAVEDGGGLLMSFFSGPSLEPM-----------YHPVATAYRWPLPELAQALETAGFQVTSSH 180 (203)
T ss_dssp STTCCTTTHHHHHHHHHHTEEEEEEEEEEEECCSSCEEE-----------CCSSSCEEECCHHHHHHHHHHTTEEEEEEE
T ss_pred HhcCCHHHHHHHHHHHHHHcCCCcEEEEEEccCCchhhh-----------hchhhhhccCCHHHHHHHHHHCCCcEEEEE
Confidence 99997 88999999999999999999999876532111 111224567899999999999999998855
Q ss_pred e
Q 018740 336 R 336 (351)
Q Consensus 336 ~ 336 (351)
.
T Consensus 181 ~ 181 (203)
T 3h2b_A 181 W 181 (203)
T ss_dssp E
T ss_pred e
Confidence 3
No 22
>4htf_A S-adenosylmethionine-dependent methyltransferase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE SAM; 1.60A {Escherichia coli}
Probab=99.86 E-value=2.8e-21 Score=175.85 Aligned_cols=162 Identities=16% Similarity=0.183 Sum_probs=124.2
Q ss_pred HHhccCCCCCCeEEEEcCccCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHhhhCCCCCCCeEEEEecCCCCC-CCCC
Q 018740 169 MKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLP-FASS 247 (351)
Q Consensus 169 l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~g~~~~~i~~~~~d~~~lp-~~~~ 247 (351)
+...+... +.+|||||||+|.++..+++.+. +|+|+|+|+.+++.|++++... |. ..++.++.+|+.+++ +.++
T Consensus 61 ~l~~~~~~-~~~vLDiGcG~G~~~~~l~~~~~--~v~gvD~s~~~~~~a~~~~~~~-~~-~~~v~~~~~d~~~~~~~~~~ 135 (285)
T 4htf_A 61 VLAEMGPQ-KLRVLDAGGGEGQTAIKMAERGH--QVILCDLSAQMIDRAKQAAEAK-GV-SDNMQFIHCAAQDVASHLET 135 (285)
T ss_dssp HHHHTCSS-CCEEEEETCTTCHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHHC--CC-GGGEEEEESCGGGTGGGCSS
T ss_pred HHHhcCCC-CCEEEEeCCcchHHHHHHHHCCC--EEEEEECCHHHHHHHHHHHHhc-CC-CcceEEEEcCHHHhhhhcCC
Confidence 33444433 67999999999999999999865 9999999999999999988765 21 268999999999987 7789
Q ss_pred ceeeEEeccccccCCChHHHHHHHHhcccCCcEEEEEeeccCCCCCcchHHHHHHHHHh-------hccCCccCCCHHHH
Q 018740 248 SIDAVHAGAAIHCWSSPSTGVAEISRVLRPGGVFVGTTYIVDGPFNLIPFSRLLRQNMM-------QISGSYTFLSEREI 320 (351)
Q Consensus 248 ~fD~V~~~~vl~h~~d~~~~l~~i~~~LkpgG~li~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~s~~~l 320 (351)
+||+|++..+++|++++..+++++.++|||||++++.+++.+...........+..... ....+..+++.+++
T Consensus 136 ~fD~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 215 (285)
T 4htf_A 136 PVDLILFHAVLEWVADPRSVLQTLWSVLRPGGVLSLMFYNAHGLLMHNMVAGNFDYVQAGMPKKKKRTLSPDYPRDPTQV 215 (285)
T ss_dssp CEEEEEEESCGGGCSCHHHHHHHHHHTEEEEEEEEEEEEBHHHHHHHHHHTTCHHHHHTTCCCC----CCCSCCBCHHHH
T ss_pred CceEEEECchhhcccCHHHHHHHHHHHcCCCeEEEEEEeCCchHHHHHHHhcCHHHHhhhccccccccCCCCCCCCHHHH
Confidence 99999999999999999999999999999999999998875321000000000000110 01224467899999
Q ss_pred HHHHHHCCCeEEEEE
Q 018740 321 EDLCRACGLVDFKCT 335 (351)
Q Consensus 321 ~~ll~~aGf~~v~~~ 335 (351)
.++++++||++++..
T Consensus 216 ~~~l~~aGf~v~~~~ 230 (285)
T 4htf_A 216 YLWLEEAGWQIMGKT 230 (285)
T ss_dssp HHHHHHTTCEEEEEE
T ss_pred HHHHHHCCCceeeee
Confidence 999999999998744
No 23
>3ocj_A Putative exported protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: PLM; 1.39A {Bordetella parapertussis}
Probab=99.86 E-value=8.2e-21 Score=174.66 Aligned_cols=171 Identities=16% Similarity=0.176 Sum_probs=131.1
Q ss_pred CCCCeEEEEcCccCHHHHHHH-HhCCCCeEEEEeCCHHHHHHHHHHHhhhCCCCCCCeEEEEecCCCCCCCCCceeeEEe
Q 018740 176 VLGGNIIDASCGSGLFSRIFA-KSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLPFASSSIDAVHA 254 (351)
Q Consensus 176 ~~~~~vLDiGcG~G~~~~~l~-~~~~~~~v~gvD~s~~~~~~a~~~~~~~~g~~~~~i~~~~~d~~~lp~~~~~fD~V~~ 254 (351)
.++.+|||||||+|.++..++ ...+..+|+|+|+|+.+++.+++++... +. ..++.++++|+.+++++ ++||+|++
T Consensus 117 ~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~-~~-~~~v~~~~~d~~~~~~~-~~fD~v~~ 193 (305)
T 3ocj_A 117 RPGCVVASVPCGWMSELLALDYSACPGVQLVGIDYDPEALDGATRLAAGH-AL-AGQITLHRQDAWKLDTR-EGYDLLTS 193 (305)
T ss_dssp CTTCEEEETTCTTCHHHHTSCCTTCTTCEEEEEESCHHHHHHHHHHHTTS-TT-GGGEEEEECCGGGCCCC-SCEEEEEC
T ss_pred CCCCEEEEecCCCCHHHHHHHHhcCCCCeEEEEECCHHHHHHHHHHHHhc-CC-CCceEEEECchhcCCcc-CCeEEEEE
Confidence 457899999999999999985 4456679999999999999999998765 21 24599999999999887 89999999
Q ss_pred ccccccCCChHH---HHHHHHhcccCCcEEEEEeeccCCCCC-cc--------hHHHHHHH-HHhh--ccCCccCCCHHH
Q 018740 255 GAAIHCWSSPST---GVAEISRVLRPGGVFVGTTYIVDGPFN-LI--------PFSRLLRQ-NMMQ--ISGSYTFLSERE 319 (351)
Q Consensus 255 ~~vl~h~~d~~~---~l~~i~~~LkpgG~li~~~~~~~~~~~-~~--------~~~~~~~~-~~~~--~~~~~~~~s~~~ 319 (351)
..+++|++++.. +++++.++|||||++++.++....... .. +....... .+.. ......+++.++
T Consensus 194 ~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 273 (305)
T 3ocj_A 194 NGLNIYEPDDARVTELYRRFWQALKPGGALVTSFLTPPPALSPDSPWDMQAIDPHDLQLQQLVFTRLIQPRWNALRTHAQ 273 (305)
T ss_dssp CSSGGGCCCHHHHHHHHHHHHHHEEEEEEEEEECCCCCTTTCTTCCCCGGGSCHHHHHHHHHHHHHTTCCSCCCCCCHHH
T ss_pred CChhhhcCCHHHHHHHHHHHHHhcCCCeEEEEEecCCCCcccccccceeeccccchhhhhhhHHHHHHhhhhhccCCHHH
Confidence 999999999975 799999999999999998866432110 01 10001111 1111 122235689999
Q ss_pred HHHHHHHCCCeEEEEE--ecCeEEEEEEecCC
Q 018740 320 IEDLCRACGLVDFKCT--RNRGFVMFTATKPS 349 (351)
Q Consensus 320 l~~ll~~aGf~~v~~~--~~g~~~~~~a~kp~ 349 (351)
+.++|+++||++++.. ..+.+..+.++||.
T Consensus 274 ~~~~l~~aGF~~v~~~~~~~~~~~~v~a~Kpa 305 (305)
T 3ocj_A 274 TRAQLEEAGFTDLRFEDDRARLFPTVIARKPA 305 (305)
T ss_dssp HHHHHHHTTCEEEEEECCTTSSSCEEEEECCC
T ss_pred HHHHHHHCCCEEEEEEcccCceeeEEEEecCC
Confidence 9999999999998866 44567788899984
No 24
>3g5l_A Putative S-adenosylmethionine dependent methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.35A {Listeria monocytogenes str}
Probab=99.86 E-value=9.2e-21 Score=169.34 Aligned_cols=162 Identities=15% Similarity=0.137 Sum_probs=124.0
Q ss_pred HHHHhccCCCCCCeEEEEcCccCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHhhhCCCCCCCeEEEEecCCCCCCCC
Q 018740 167 ELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLPFAS 246 (351)
Q Consensus 167 ~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~g~~~~~i~~~~~d~~~lp~~~ 246 (351)
..+...+...++.+|||+|||+|.++..+++.++ .+|+|+|+|+.+++.++++.. ..++.++.+|+.++++++
T Consensus 34 ~~l~~~~~~~~~~~vLD~GcG~G~~~~~l~~~~~-~~v~~vD~s~~~~~~a~~~~~------~~~~~~~~~d~~~~~~~~ 106 (253)
T 3g5l_A 34 HELKKMLPDFNQKTVLDLGCGFGWHCIYAAEHGA-KKVLGIDLSERMLTEAKRKTT------SPVVCYEQKAIEDIAIEP 106 (253)
T ss_dssp HHHHTTCCCCTTCEEEEETCTTCHHHHHHHHTTC-SEEEEEESCHHHHHHHHHHCC------CTTEEEEECCGGGCCCCT
T ss_pred HHHHHhhhccCCCEEEEECCCCCHHHHHHHHcCC-CEEEEEECCHHHHHHHHHhhc------cCCeEEEEcchhhCCCCC
Confidence 4566677766788999999999999999999874 389999999999999998743 368999999999999888
Q ss_pred CceeeEEeccccccCCChHHHHHHHHhcccCCcEEEEEeeccCCCCCc--------------chHHHHHHH-----HHhh
Q 018740 247 SSIDAVHAGAAIHCWSSPSTGVAEISRVLRPGGVFVGTTYIVDGPFNL--------------IPFSRLLRQ-----NMMQ 307 (351)
Q Consensus 247 ~~fD~V~~~~vl~h~~d~~~~l~~i~~~LkpgG~li~~~~~~~~~~~~--------------~~~~~~~~~-----~~~~ 307 (351)
++||+|++..+++|++++..+|+++.++|||||.+++.++........ .++...+.. .+..
T Consensus 107 ~~fD~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (253)
T 3g5l_A 107 DAYNVVLSSLALHYIASFDDICKKVYINLKSSGSFIFSVEHPVFTADGRQDWYTDETGNKLHWPVDRYFNESMRTSHFLG 186 (253)
T ss_dssp TCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEEECHHHHSSSSCSCEECSSCCEEEEEECCTTCCCEEEEEETT
T ss_pred CCeEEEEEchhhhhhhhHHHHHHHHHHHcCCCcEEEEEeCCCccccCccccceeccCCceEEEEeccccccceEEEeecc
Confidence 999999999999999999999999999999999999987653100000 000000000 0000
Q ss_pred ccCCccCCCHHHHHHHHHHCCCeEEEEE
Q 018740 308 ISGSYTFLSEREIEDLCRACGLVDFKCT 335 (351)
Q Consensus 308 ~~~~~~~~s~~~l~~ll~~aGf~~v~~~ 335 (351)
.......++.+++.++|+++||++++..
T Consensus 187 ~~~~~~~~t~~~~~~~l~~aGF~~~~~~ 214 (253)
T 3g5l_A 187 EDVQKYHRTVTTYIQTLLKNGFQINSVI 214 (253)
T ss_dssp EEEEEECCCHHHHHHHHHHTTEEEEEEE
T ss_pred ccCccEecCHHHHHHHHHHcCCeeeeee
Confidence 0011123499999999999999998865
No 25
>3i9f_A Putative type 11 methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.50A {Sulfolobus solfataricus}
Probab=99.86 E-value=2e-21 Score=163.04 Aligned_cols=147 Identities=14% Similarity=0.158 Sum_probs=121.8
Q ss_pred cCCCCCCeEEEEcCccCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHhhhCCCCCCCeEEEEecCCCCCCCCCceeeE
Q 018740 173 LKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLPFASSSIDAV 252 (351)
Q Consensus 173 l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~g~~~~~i~~~~~d~~~lp~~~~~fD~V 252 (351)
+...++.+|||+|||+|.++..+++.+. +++|+|+|+.+++.++++ .+++.+..+| +++++++||+|
T Consensus 13 ~~~~~~~~vLDiG~G~G~~~~~l~~~~~--~v~~vD~s~~~~~~a~~~--------~~~v~~~~~d---~~~~~~~~D~v 79 (170)
T 3i9f_A 13 IFEGKKGVIVDYGCGNGFYCKYLLEFAT--KLYCIDINVIALKEVKEK--------FDSVITLSDP---KEIPDNSVDFI 79 (170)
T ss_dssp HHSSCCEEEEEETCTTCTTHHHHHTTEE--EEEEECSCHHHHHHHHHH--------CTTSEEESSG---GGSCTTCEEEE
T ss_pred cCcCCCCeEEEECCCCCHHHHHHHhhcC--eEEEEeCCHHHHHHHHHh--------CCCcEEEeCC---CCCCCCceEEE
Confidence 3455677999999999999999999885 999999999999999987 4688999998 67778999999
Q ss_pred EeccccccCCChHHHHHHHHhcccCCcEEEEEeeccCCCCCcchHHHHHHHHHhhccCCccCCCHHHHHHHHHHCCCeEE
Q 018740 253 HAGAAIHCWSSPSTGVAEISRVLRPGGVFVGTTYIVDGPFNLIPFSRLLRQNMMQISGSYTFLSEREIEDLCRACGLVDF 332 (351)
Q Consensus 253 ~~~~vl~h~~d~~~~l~~i~~~LkpgG~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~~ll~~aGf~~v 332 (351)
++..+++|++++..+++++.++|+|||.+++.++....... ...+...++.+++.++++ ||+++
T Consensus 80 ~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~--------------~~~~~~~~~~~~~~~~l~--Gf~~~ 143 (170)
T 3i9f_A 80 LFANSFHDMDDKQHVISEVKRILKDDGRVIIIDWRKENTGI--------------GPPLSIRMDEKDYMGWFS--NFVVE 143 (170)
T ss_dssp EEESCSTTCSCHHHHHHHHHHHEEEEEEEEEEEECSSCCSS--------------SSCGGGCCCHHHHHHHTT--TEEEE
T ss_pred EEccchhcccCHHHHHHHHHHhcCCCCEEEEEEcCcccccc--------------CchHhhhcCHHHHHHHHh--CcEEE
Confidence 99999999999999999999999999999999887643211 112445689999999999 99999
Q ss_pred EEEecC-eEEEEEEecC
Q 018740 333 KCTRNR-GFVMFTATKP 348 (351)
Q Consensus 333 ~~~~~g-~~~~~~a~kp 348 (351)
+....+ ....++++|+
T Consensus 144 ~~~~~~~~~~~l~~~~~ 160 (170)
T 3i9f_A 144 KRFNPTPYHFGLVLKRK 160 (170)
T ss_dssp EEECSSTTEEEEEEEEC
T ss_pred EccCCCCceEEEEEecC
Confidence 976655 3444455443
No 26
>2p35_A Trans-aconitate 2-methyltransferase; SAM dependent methyltrans agrobacterium tumefaciens, structural genomics, PSI-2; HET: SAH; 1.95A {Agrobacterium tumefaciens str}
Probab=99.86 E-value=1.8e-20 Score=167.71 Aligned_cols=156 Identities=12% Similarity=0.027 Sum_probs=122.7
Q ss_pred HHHHhccCCCCCCeEEEEcCccCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHhhhCCCCCCCeEEEEecCCCCCCCC
Q 018740 167 ELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLPFAS 246 (351)
Q Consensus 167 ~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~g~~~~~i~~~~~d~~~lp~~~ 246 (351)
..+...+...++.+|||||||+|.++..+++..+..+++|+|+|+.|++.++++ .+++.++.+|+.+++ ++
T Consensus 23 ~~l~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~~D~s~~~~~~a~~~--------~~~~~~~~~d~~~~~-~~ 93 (259)
T 2p35_A 23 RDLLAQVPLERVLNGYDLGCGPGNSTELLTDRYGVNVITGIDSDDDMLEKAADR--------LPNTNFGKADLATWK-PA 93 (259)
T ss_dssp HHHHTTCCCSCCSSEEEETCTTTHHHHHHHHHHCTTSEEEEESCHHHHHHHHHH--------STTSEEEECCTTTCC-CS
T ss_pred HHHHHhcCCCCCCEEEEecCcCCHHHHHHHHhCCCCEEEEEECCHHHHHHHHHh--------CCCcEEEECChhhcC-cc
Confidence 455666666678899999999999999999986556999999999999999986 467899999999988 78
Q ss_pred CceeeEEeccccccCCChHHHHHHHHhcccCCcEEEEEeeccCCCCCcchHHHHHHHH--Hhhc-----cCCccCCCHHH
Q 018740 247 SSIDAVHAGAAIHCWSSPSTGVAEISRVLRPGGVFVGTTYIVDGPFNLIPFSRLLRQN--MMQI-----SGSYTFLSERE 319 (351)
Q Consensus 247 ~~fD~V~~~~vl~h~~d~~~~l~~i~~~LkpgG~li~~~~~~~~~~~~~~~~~~~~~~--~~~~-----~~~~~~~s~~~ 319 (351)
++||+|++..+++|++++..+++++.++|+|||.+++.++..... .....+...... +... ..+..+++.++
T Consensus 94 ~~fD~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (259)
T 2p35_A 94 QKADLLYANAVFQWVPDHLAVLSQLMDQLESGGVLAVQMPDNLQE-PTHIAMHETADGGPWKDAFSGGGLRRKPLPPPSD 172 (259)
T ss_dssp SCEEEEEEESCGGGSTTHHHHHHHHGGGEEEEEEEEEEEECCTTS-HHHHHHHHHHHHSTTGGGC-------CCCCCHHH
T ss_pred CCcCEEEEeCchhhCCCHHHHHHHHHHhcCCCeEEEEEeCCCCCc-HHHHHHHHHhcCcchHHHhccccccccCCCCHHH
Confidence 899999999999999999999999999999999999998754211 111111111111 1110 22557889999
Q ss_pred HHHHHHHCCCeEE
Q 018740 320 IEDLCRACGLVDF 332 (351)
Q Consensus 320 l~~ll~~aGf~~v 332 (351)
+.++|+++||.+.
T Consensus 173 ~~~~l~~aGf~v~ 185 (259)
T 2p35_A 173 YFNALSPKSSRVD 185 (259)
T ss_dssp HHHHHGGGEEEEE
T ss_pred HHHHHHhcCCceE
Confidence 9999999999743
No 27
>3jwh_A HEN1; methyltransferase; HET: SAH; 2.20A {Anabaena variabilis} PDB: 3jwj_A
Probab=99.86 E-value=4.4e-21 Score=167.54 Aligned_cols=161 Identities=16% Similarity=0.135 Sum_probs=120.1
Q ss_pred HHHHhccCCCCCCeEEEEcCccCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHhhhCCCC---CCCeEEEEecCCCCC
Q 018740 167 ELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFP---KENFLLVRADISRLP 243 (351)
Q Consensus 167 ~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~g~~---~~~i~~~~~d~~~lp 243 (351)
+.+...+...++.+|||||||+|.++..+++.++..+++|+|+|+.+++.+++++... +.. ..++.++++|+...+
T Consensus 19 ~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~-~~~~~~~~~v~~~~~d~~~~~ 97 (217)
T 3jwh_A 19 NGVVAALKQSNARRVIDLGCGQGNLLKILLKDSFFEQITGVDVSYRSLEIAQERLDRL-RLPRNQWERLQLIQGALTYQD 97 (217)
T ss_dssp HHHHHHHHHTTCCEEEEETCTTCHHHHHHHHCTTCSEEEEEESCHHHHHHHHHHHTTC-CCCHHHHTTEEEEECCTTSCC
T ss_pred HHHHHHHHhcCCCEEEEeCCCCCHHHHHHHhhCCCCEEEEEECCHHHHHHHHHHHHHh-cCCcccCcceEEEeCCccccc
Confidence 4555555555678999999999999999999887679999999999999999987654 110 127999999998888
Q ss_pred CCCCceeeEEeccccccCCCh--HHHHHHHHhcccCCcEEEEEeeccCCCCCcchHHHHHHHHHhhccCCccCCCHHHHH
Q 018740 244 FASSSIDAVHAGAAIHCWSSP--STGVAEISRVLRPGGVFVGTTYIVDGPFNLIPFSRLLRQNMMQISGSYTFLSEREIE 321 (351)
Q Consensus 244 ~~~~~fD~V~~~~vl~h~~d~--~~~l~~i~~~LkpgG~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~ 321 (351)
.++++||+|++..+++|++++ ..+++++.++|||||++++.... + ....+............+...++.+++.
T Consensus 98 ~~~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~li~~~~~-~----~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 172 (217)
T 3jwh_A 98 KRFHGYDAATVIEVIEHLDLSRLGAFERVLFEFAQPKIVIVTTPNI-E----YNVKFANLPAGKLRHKDHRFEWTRSQFQ 172 (217)
T ss_dssp GGGCSCSEEEEESCGGGCCHHHHHHHHHHHHTTTCCSEEEEEEEBH-H----HHHHTC-----------CCSCBCHHHHH
T ss_pred ccCCCcCEEeeHHHHHcCCHHHHHHHHHHHHHHcCCCEEEEEccCc-c----cchhhcccccccccccccccccCHHHHH
Confidence 777899999999999999877 79999999999999966654432 1 0000000111111233466778999999
Q ss_pred ----HHHHHCCCeEEE
Q 018740 322 ----DLCRACGLVDFK 333 (351)
Q Consensus 322 ----~ll~~aGf~~v~ 333 (351)
++++++||++..
T Consensus 173 ~~~~~~~~~~Gf~v~~ 188 (217)
T 3jwh_A 173 NWANKITERFAYNVQF 188 (217)
T ss_dssp HHHHHHHHHSSEEEEE
T ss_pred HHHHHHHHHcCceEEE
Confidence 999999998755
No 28
>3e23_A Uncharacterized protein RPA2492; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAM; 1.60A {Rhodopseudomonas palustris}
Probab=99.86 E-value=9.1e-21 Score=164.70 Aligned_cols=159 Identities=21% Similarity=0.275 Sum_probs=127.3
Q ss_pred HHHHHhccCCCCCCeEEEEcCccCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHhhhCCCCCCCeEEEEecCCCCCCC
Q 018740 166 FELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLPFA 245 (351)
Q Consensus 166 ~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~g~~~~~i~~~~~d~~~lp~~ 245 (351)
...+...+. ++.+|||+|||+|.++..+++.+. +|+|+|+|+.+++.+++++ ++.+..+|+..++ .
T Consensus 34 ~~~~~~~~~--~~~~vLDiGcG~G~~~~~l~~~~~--~v~~vD~s~~~~~~a~~~~---------~~~~~~~d~~~~~-~ 99 (211)
T 3e23_A 34 LTKFLGELP--AGAKILELGCGAGYQAEAMLAAGF--DVDATDGSPELAAEASRRL---------GRPVRTMLFHQLD-A 99 (211)
T ss_dssp HHHHHTTSC--TTCEEEESSCTTSHHHHHHHHTTC--EEEEEESCHHHHHHHHHHH---------TSCCEECCGGGCC-C
T ss_pred HHHHHHhcC--CCCcEEEECCCCCHHHHHHHHcCC--eEEEECCCHHHHHHHHHhc---------CCceEEeeeccCC-C
Confidence 334444443 477999999999999999999865 9999999999999999874 4567889999988 7
Q ss_pred CCceeeEEeccccccCC--ChHHHHHHHHhcccCCcEEEEEeeccCCCCCcchHHHHHHHHHhhccCCccCCCHHHHHHH
Q 018740 246 SSSIDAVHAGAAIHCWS--SPSTGVAEISRVLRPGGVFVGTTYIVDGPFNLIPFSRLLRQNMMQISGSYTFLSEREIEDL 323 (351)
Q Consensus 246 ~~~fD~V~~~~vl~h~~--d~~~~l~~i~~~LkpgG~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~~l 323 (351)
+++||+|++..+++|++ ++..+|+++.++|||||++++..+...... . .....+..+++.+++.++
T Consensus 100 ~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~--~----------~~~~~~~~~~~~~~~~~~ 167 (211)
T 3e23_A 100 IDAYDAVWAHACLLHVPRDELADVLKLIWRALKPGGLFYASYKSGEGEG--R----------DKLARYYNYPSEEWLRAR 167 (211)
T ss_dssp CSCEEEEEECSCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEECCSSCE--E----------CTTSCEECCCCHHHHHHH
T ss_pred CCcEEEEEecCchhhcCHHHHHHHHHHHHHhcCCCcEEEEEEcCCCccc--c----------cccchhccCCCHHHHHHH
Confidence 88999999999999998 778999999999999999999887654321 1 012235568899999999
Q ss_pred HHHCC-CeEEEEEec---------CeEEEEEEecCCC
Q 018740 324 CRACG-LVDFKCTRN---------RGFVMFTATKPSQ 350 (351)
Q Consensus 324 l~~aG-f~~v~~~~~---------g~~~~~~a~kp~~ 350 (351)
++++| |++++.... ..|..++.++|+.
T Consensus 168 l~~aG~f~~~~~~~~~~~~~~~~~~~wl~~~~~~~~~ 204 (211)
T 3e23_A 168 YAEAGTWASVAVESSEGKGFDQELAQFLHVSVRKPEL 204 (211)
T ss_dssp HHHHCCCSEEEEEEEEEECTTSCEEEEEEEEEECCCC
T ss_pred HHhCCCcEEEEEEeccCCCCCCCCceEEEEEEecCcc
Confidence 99999 999884432 2367777777764
No 29
>3ou2_A SAM-dependent methyltransferase; O-methyltransferase, SAH; HET: SAH; 1.50A {Streptomyces luridus} PDB: 3ou6_A* 3ou7_A*
Probab=99.86 E-value=1.3e-20 Score=164.09 Aligned_cols=167 Identities=17% Similarity=0.138 Sum_probs=123.7
Q ss_pred HHhccC-CCCCCeEEEEcCccCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHhhhCCCCCCCeEEEEecCCCCCCCCC
Q 018740 169 MKGYLK-PVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLPFASS 247 (351)
Q Consensus 169 l~~~l~-~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~g~~~~~i~~~~~d~~~lp~~~~ 247 (351)
+...+. ..++.+|||||||+|.++..+++.+. +++|+|+|+.+++.+++. ...++.++++|+.++ ++++
T Consensus 37 ~~~~l~~~~~~~~vLdiG~G~G~~~~~l~~~~~--~v~~~D~s~~~~~~a~~~-------~~~~~~~~~~d~~~~-~~~~ 106 (218)
T 3ou2_A 37 ALERLRAGNIRGDVLELASGTGYWTRHLSGLAD--RVTALDGSAEMIAEAGRH-------GLDNVEFRQQDLFDW-TPDR 106 (218)
T ss_dssp HHHHHTTTTSCSEEEEESCTTSHHHHHHHHHSS--EEEEEESCHHHHHHHGGG-------CCTTEEEEECCTTSC-CCSS
T ss_pred HHHHHhcCCCCCeEEEECCCCCHHHHHHHhcCC--eEEEEeCCHHHHHHHHhc-------CCCCeEEEecccccC-CCCC
Confidence 333333 44567999999999999999999965 999999999999999872 137899999999988 6789
Q ss_pred ceeeEEeccccccCCCh--HHHHHHHHhcccCCcEEEEEeeccCCCCCcchHHHH-HHHHHhh---ccC----CccCCCH
Q 018740 248 SIDAVHAGAAIHCWSSP--STGVAEISRVLRPGGVFVGTTYIVDGPFNLIPFSRL-LRQNMMQ---ISG----SYTFLSE 317 (351)
Q Consensus 248 ~fD~V~~~~vl~h~~d~--~~~l~~i~~~LkpgG~li~~~~~~~~~~~~~~~~~~-~~~~~~~---~~~----~~~~~s~ 317 (351)
+||+|++..+++|++++ ..+|+++.++|+|||.+++.+++..... ....... ....... ... ...+++.
T Consensus 107 ~~D~v~~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 185 (218)
T 3ou2_A 107 QWDAVFFAHWLAHVPDDRFEAFWESVRSAVAPGGVVEFVDVTDHERR-LEQQDDSEPEVAVRRTLQDGRSFRIVKVFRSP 185 (218)
T ss_dssp CEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEECCCC-------------CEEEEECTTSCEEEEECCCCCH
T ss_pred ceeEEEEechhhcCCHHHHHHHHHHHHHHcCCCeEEEEEeCCCCccc-cchhhhcccccceeeecCCcchhhHhhcCCCH
Confidence 99999999999999987 7999999999999999999998763211 0110000 0000000 011 1346799
Q ss_pred HHHHHHHHHCCCeEEEEEecCeEEEEEEe
Q 018740 318 REIEDLCRACGLVDFKCTRNRGFVMFTAT 346 (351)
Q Consensus 318 ~~l~~ll~~aGf~~v~~~~~g~~~~~~a~ 346 (351)
+++.++++++||++......+......++
T Consensus 186 ~~~~~~l~~aGf~v~~~~~~~~~~~~~~~ 214 (218)
T 3ou2_A 186 AELTERLTALGWSCSVDEVHPGFLYATCR 214 (218)
T ss_dssp HHHHHHHHHTTEEEEEEEEETTEEEEEEE
T ss_pred HHHHHHHHHCCCEEEeeeccccceEeecC
Confidence 99999999999997666665555444443
No 30
>3mcz_A O-methyltransferase; adomet_mtases, S-adenosylmethionine-dependent methyltransfer structural genomics, PSI-2; HET: MSE; 1.90A {Burkholderia thailandensis}
Probab=99.86 E-value=4.3e-20 Score=173.15 Aligned_cols=178 Identities=12% Similarity=0.131 Sum_probs=138.1
Q ss_pred HHHhccCCCC-CCeEEEEcCccCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHhhhCCCCCCCeEEEEecCCCCC-CC
Q 018740 168 LMKGYLKPVL-GGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLP-FA 245 (351)
Q Consensus 168 ~l~~~l~~~~-~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~g~~~~~i~~~~~d~~~lp-~~ 245 (351)
.+...+...+ +.+|||||||+|.++..+++.++..+++++|+ +.+++.+++++... +. ..+++++.+|+.+.+ +.
T Consensus 169 ~~l~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~-~~-~~~v~~~~~d~~~~~~~~ 245 (352)
T 3mcz_A 169 DVVSELGVFARARTVIDLAGGHGTYLAQVLRRHPQLTGQIWDL-PTTRDAARKTIHAH-DL-GGRVEFFEKNLLDARNFE 245 (352)
T ss_dssp HHHHTCGGGTTCCEEEEETCTTCHHHHHHHHHCTTCEEEEEEC-GGGHHHHHHHHHHT-TC-GGGEEEEECCTTCGGGGT
T ss_pred HHHHhCCCcCCCCEEEEeCCCcCHHHHHHHHhCCCCeEEEEEC-HHHHHHHHHHHHhc-CC-CCceEEEeCCcccCcccC
Confidence 4444555445 78999999999999999999988889999999 88999999987765 11 357999999998875 13
Q ss_pred CCceeeEEeccccccCCCh--HHHHHHHHhcccCCcEEEEEeeccCCCCCcchHHHHHHHH-HhhccCCccCCCHHHHHH
Q 018740 246 SSSIDAVHAGAAIHCWSSP--STGVAEISRVLRPGGVFVGTTYIVDGPFNLIPFSRLLRQN-MMQISGSYTFLSEREIED 322 (351)
Q Consensus 246 ~~~fD~V~~~~vl~h~~d~--~~~l~~i~~~LkpgG~li~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~s~~~l~~ 322 (351)
.+.||+|++.+++||++++ ..+|++++++|+|||.+++.++..+.... .+....+... ......+...++.+++.+
T Consensus 246 ~~~~D~v~~~~vlh~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~t~~e~~~ 324 (352)
T 3mcz_A 246 GGAADVVMLNDCLHYFDAREAREVIGHAAGLVKPGGALLILTMTMNDDRV-TPALSADFSLHMMVNTNHGELHPTPWIAG 324 (352)
T ss_dssp TCCEEEEEEESCGGGSCHHHHHHHHHHHHHTEEEEEEEEEEEECCCTTSS-SSHHHHHHHHHHHHHSTTCCCCCHHHHHH
T ss_pred CCCccEEEEecccccCCHHHHHHHHHHHHHHcCCCCEEEEEEeccCCCCC-CCchHHHhhHHHHhhCCCCCcCCHHHHHH
Confidence 4569999999999999877 79999999999999999999887654321 2222222211 111122455789999999
Q ss_pred HHHHCCCeEEEEEecCeEEEEEEecCCC
Q 018740 323 LCRACGLVDFKCTRNRGFVMFTATKPSQ 350 (351)
Q Consensus 323 ll~~aGf~~v~~~~~g~~~~~~a~kp~~ 350 (351)
+++++||++++. ..+.+.++.++||+.
T Consensus 325 ll~~aGf~~~~~-~~g~~~l~~a~kp~~ 351 (352)
T 3mcz_A 325 VVRDAGLAVGER-SIGRYTLLIGQRSSG 351 (352)
T ss_dssp HHHHTTCEEEEE-EETTEEEEEEECCCC
T ss_pred HHHHCCCceeee-ccCceEEEEEecCCC
Confidence 999999999984 456788999999974
No 31
>1y8c_A S-adenosylmethionine-dependent methyltransferase; structural genomics, protein structure initiative, PSI; 2.50A {Clostridium acetobutylicum} SCOP: c.66.1.43
Probab=99.85 E-value=3.9e-21 Score=170.46 Aligned_cols=166 Identities=16% Similarity=0.152 Sum_probs=126.7
Q ss_pred CCCeEEEEcCccCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHhhhCCCCCCCeEEEEecCCCCCCCCCceeeEEecc
Q 018740 177 LGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLPFASSSIDAVHAGA 256 (351)
Q Consensus 177 ~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~g~~~~~i~~~~~d~~~lp~~~~~fD~V~~~~ 256 (351)
++.+|||+|||+|.++..+++.+. +++|+|+|+.+++.+++++... ..++.++++|+.+++++ ++||+|++..
T Consensus 37 ~~~~vLdiG~G~G~~~~~l~~~~~--~~~~~D~s~~~~~~a~~~~~~~----~~~~~~~~~d~~~~~~~-~~fD~v~~~~ 109 (246)
T 1y8c_A 37 VFDDYLDLACGTGNLTENLCPKFK--NTWAVDLSQEMLSEAENKFRSQ----GLKPRLACQDISNLNIN-RKFDLITCCL 109 (246)
T ss_dssp CTTEEEEETCTTSTTHHHHGGGSS--EEEEECSCHHHHHHHHHHHHHT----TCCCEEECCCGGGCCCS-CCEEEEEECT
T ss_pred CCCeEEEeCCCCCHHHHHHHHCCC--cEEEEECCHHHHHHHHHHHhhc----CCCeEEEecccccCCcc-CCceEEEEcC
Confidence 578999999999999999999875 9999999999999999988765 34899999999998876 8899999998
Q ss_pred -ccccC---CChHHHHHHHHhcccCCcEEEEEeeccCCCCCcch---HH---HH---HHHH-------------------
Q 018740 257 -AIHCW---SSPSTGVAEISRVLRPGGVFVGTTYIVDGPFNLIP---FS---RL---LRQN------------------- 304 (351)
Q Consensus 257 -vl~h~---~d~~~~l~~i~~~LkpgG~li~~~~~~~~~~~~~~---~~---~~---~~~~------------------- 304 (351)
+++|+ .++..+|+++.++|+|||.+++..++........+ +. .. .+..
T Consensus 110 ~~l~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 189 (246)
T 1y8c_A 110 DSTNYIIDSDDLKKYFKAVSNHLKEGGVFIFDINSYYKLSQVLGNNDFNYDDDEVFYYWENQFEDDLVSMYISFFVRDGE 189 (246)
T ss_dssp TGGGGCCSHHHHHHHHHHHHTTEEEEEEEEEEEECHHHHHTTTTTCCEEEEETTEEEEEEEEEETTEEEEEEEEEEECSS
T ss_pred ccccccCCHHHHHHHHHHHHHhcCCCcEEEEEecCHHHHHhhcCcceEEecCCcEEEEEecccCCceEEEEEEEEEecCC
Confidence 99999 45679999999999999999997775421000000 00 00 0000
Q ss_pred -Hh--hccCCccCCCHHHHHHHHHHCCCeEEEEEec---------CeEEEEEEecCC
Q 018740 305 -MM--QISGSYTFLSEREIEDLCRACGLVDFKCTRN---------RGFVMFTATKPS 349 (351)
Q Consensus 305 -~~--~~~~~~~~~s~~~l~~ll~~aGf~~v~~~~~---------g~~~~~~a~kp~ 349 (351)
+. ....+.++++.+++.++|+++||++++.... ....+++++||+
T Consensus 190 ~~~~~~~~~~~~~~~~~~l~~ll~~aGf~~~~~~~~~~~~~~~~~~~~~~~varK~~ 246 (246)
T 1y8c_A 190 FYKRFDEEHEERAYKEEDIEKYLKHGQLNILDKVDCYSNKKVEKFTERITYLVKLGG 246 (246)
T ss_dssp SEEEEEEEEEEECCCHHHHHHHHHHTTEEEEEEEESSSSCBCCTTCSEEEEEEEECC
T ss_pred cccccEEEEEEEcCCHHHHHHHHHHCCCeEEEEEcccccCcCCCCceeEEEEEEecC
Confidence 00 0011356889999999999999999986533 245788888874
No 32
>3jwg_A HEN1, methyltransferase type 12; 1.90A {Clostridium thermocellum} PDB: 3jwi_A
Probab=99.85 E-value=5.6e-21 Score=167.00 Aligned_cols=161 Identities=17% Similarity=0.183 Sum_probs=121.5
Q ss_pred HHHHhccCCCCCCeEEEEcCccCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHhhhCCCC---CCCeEEEEecCCCCC
Q 018740 167 ELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFP---KENFLLVRADISRLP 243 (351)
Q Consensus 167 ~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~g~~---~~~i~~~~~d~~~lp 243 (351)
+.+...+...++.+|||||||+|.++..+++.++..+++|+|+|+.+++.+++++... +.. ..++.++++|+..++
T Consensus 19 ~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~-~~~~~~~~~v~~~~~d~~~~~ 97 (219)
T 3jwg_A 19 GTVVAVLKSVNAKKVIDLGCGEGNLLSLLLKDKSFEQITGVDVSYSVLERAKDRLKID-RLPEMQRKRISLFQSSLVYRD 97 (219)
T ss_dssp HHHHHHHHHTTCCEEEEETCTTCHHHHHHHTSTTCCEEEEEESCHHHHHHHHHHHTGG-GSCHHHHTTEEEEECCSSSCC
T ss_pred HHHHHHHhhcCCCEEEEecCCCCHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHHhh-ccccccCcceEEEeCcccccc
Confidence 4455555545678999999999999999999886679999999999999999987654 110 128999999998888
Q ss_pred CCCCceeeEEeccccccCCCh--HHHHHHHHhcccCCcEEEEEeeccCCCCCcchHHHHHHHHHhhccCCccCCCHHHHH
Q 018740 244 FASSSIDAVHAGAAIHCWSSP--STGVAEISRVLRPGGVFVGTTYIVDGPFNLIPFSRLLRQNMMQISGSYTFLSEREIE 321 (351)
Q Consensus 244 ~~~~~fD~V~~~~vl~h~~d~--~~~l~~i~~~LkpgG~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~ 321 (351)
..+++||+|++..+++|++++ ..+++++.++|||||+++ .+++.+....... +. ........+...++.+++.
T Consensus 98 ~~~~~fD~V~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~~i-~~~~~~~~~~~~~-~~---~~~~~~~~~~~~~~~~~l~ 172 (219)
T 3jwg_A 98 KRFSGYDAATVIEVIEHLDENRLQAFEKVLFEFTRPQTVIV-STPNKEYNFHYGN-LF---EGNLRHRDHRFEWTRKEFQ 172 (219)
T ss_dssp GGGTTCSEEEEESCGGGCCHHHHHHHHHHHHTTTCCSEEEE-EEEBGGGGGCCCC-T--------GGGCCTTSBCHHHHH
T ss_pred cccCCCCEEEEHHHHHhCCHHHHHHHHHHHHHhhCCCEEEE-Eccchhhhhhhcc-cC---cccccccCceeeecHHHHH
Confidence 778899999999999999877 699999999999999554 4544321111100 10 1111234466778999999
Q ss_pred ----HHHHHCCCeEEE
Q 018740 322 ----DLCRACGLVDFK 333 (351)
Q Consensus 322 ----~ll~~aGf~~v~ 333 (351)
++++++||++..
T Consensus 173 ~~~~~l~~~~Gf~v~~ 188 (219)
T 3jwg_A 173 TWAVKVAEKYGYSVRF 188 (219)
T ss_dssp HHHHHHHHHHTEEEEE
T ss_pred HHHHHHHHHCCcEEEE
Confidence 889999997755
No 33
>3sm3_A SAM-dependent methyltransferases; NESG, structural genomics, PSI-biology, protein structure in northeast structural genomics; 2.20A {Methanosarcina mazei}
Probab=99.85 E-value=2.5e-20 Score=164.05 Aligned_cols=160 Identities=19% Similarity=0.252 Sum_probs=125.0
Q ss_pred HHhccCCCCCCeEEEEcCccCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHhhhCCCC---CCCeEEEEecCCCCCCC
Q 018740 169 MKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFP---KENFLLVRADISRLPFA 245 (351)
Q Consensus 169 l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~g~~---~~~i~~~~~d~~~lp~~ 245 (351)
+...+. ++.+|||+|||+|.++..+++.+. +|+|+|+|+.+++.+++++... +.. ..++.++.+|+..++++
T Consensus 24 ~~~~~~--~~~~vLdiG~G~G~~~~~l~~~~~--~v~~vD~s~~~~~~a~~~~~~~-~~~~~~~~~~~~~~~d~~~~~~~ 98 (235)
T 3sm3_A 24 IHNYLQ--EDDEILDIGCGSGKISLELASKGY--SVTGIDINSEAIRLAETAARSP-GLNQKTGGKAEFKVENASSLSFH 98 (235)
T ss_dssp HHHHCC--TTCEEEEETCTTSHHHHHHHHTTC--EEEEEESCHHHHHHHHHHTTCC-SCCSSSSCEEEEEECCTTSCCSC
T ss_pred HHHhCC--CCCeEEEECCCCCHHHHHHHhCCC--eEEEEECCHHHHHHHHHHHHhc-CCccccCcceEEEEecccccCCC
Confidence 344444 477999999999999999999865 9999999999999999987654 110 13689999999999988
Q ss_pred CCceeeEEeccccccCCChH---HHHHHHHhcccCCcEEEEEeeccCCCCCcchHHHHHHHHHhhc--------------
Q 018740 246 SSSIDAVHAGAAIHCWSSPS---TGVAEISRVLRPGGVFVGTTYIVDGPFNLIPFSRLLRQNMMQI-------------- 308 (351)
Q Consensus 246 ~~~fD~V~~~~vl~h~~d~~---~~l~~i~~~LkpgG~li~~~~~~~~~~~~~~~~~~~~~~~~~~-------------- 308 (351)
+++||+|++..+++|++++. .+++++.++|+|||.+++.++....... .+.......+...
T Consensus 99 ~~~~D~v~~~~~l~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~ 176 (235)
T 3sm3_A 99 DSSFDFAVMQAFLTSVPDPKERSRIIKEVFRVLKPGAYLYLVEFGQNWHLK--LYRKRYLHDFPITKEEGSFLARDPETG 176 (235)
T ss_dssp TTCEEEEEEESCGGGCCCHHHHHHHHHHHHHHEEEEEEEEEEEEBCCTTSH--HHHHHHHHHHHHHCSTTEEEEECTTTC
T ss_pred CCceeEEEEcchhhcCCCHHHHHHHHHHHHHHcCCCeEEEEEECCcchhHH--HHHHHhhhhccchhhhcceEecccccC
Confidence 99999999999999999998 8999999999999999999987643211 1111111111110
Q ss_pred --cCCccCCCHHHHHHHHHHCCCeEEEEE
Q 018740 309 --SGSYTFLSEREIEDLCRACGLVDFKCT 335 (351)
Q Consensus 309 --~~~~~~~s~~~l~~ll~~aGf~~v~~~ 335 (351)
..+..+++.+++.++++++||++++..
T Consensus 177 ~~~~~~~~~~~~~l~~ll~~aGf~~~~~~ 205 (235)
T 3sm3_A 177 ETEFIAHHFTEKELVFLLTDCRFEIDYFR 205 (235)
T ss_dssp CEEEEEECBCHHHHHHHHHTTTEEEEEEE
T ss_pred CcceeeEeCCHHHHHHHHHHcCCEEEEEE
Confidence 113457899999999999999998844
No 34
>3gu3_A Methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; HET: SAH; 2.30A {Bacillus cereus} SCOP: c.66.1.49 PDB: 2gh1_A
Probab=99.85 E-value=3e-20 Score=169.20 Aligned_cols=165 Identities=15% Similarity=0.150 Sum_probs=126.1
Q ss_pred HHHhc-cCCCCCCeEEEEcCccCHHHHHHHHhCC-CCeEEEEeCCHHHHHHHHHHHhhhCCCCCCCeEEEEecCCCCCCC
Q 018740 168 LMKGY-LKPVLGGNIIDASCGSGLFSRIFAKSGL-FSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLPFA 245 (351)
Q Consensus 168 ~l~~~-l~~~~~~~vLDiGcG~G~~~~~l~~~~~-~~~v~gvD~s~~~~~~a~~~~~~~~g~~~~~i~~~~~d~~~lp~~ 245 (351)
.+... ....++.+|||||||+|.++..+++..+ ..+|+|+|+|+.+++.+++++... ..++.++++|+.++++
T Consensus 12 ~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~~v~gvD~s~~~~~~a~~~~~~~----~~~v~~~~~d~~~~~~- 86 (284)
T 3gu3_A 12 FLVNTVWKITKPVHIVDYGCGYGYLGLVLMPLLPEGSKYTGIDSGETLLAEARELFRLL----PYDSEFLEGDATEIEL- 86 (284)
T ss_dssp HHHHTTSCCCSCCEEEEETCTTTHHHHHHTTTSCTTCEEEEEESCHHHHHHHHHHHHSS----SSEEEEEESCTTTCCC-
T ss_pred HHHHHHhccCCCCeEEEecCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHhc----CCceEEEEcchhhcCc-
Confidence 34433 3556688999999999999999999865 369999999999999999988765 4589999999999887
Q ss_pred CCceeeEEeccccccCCChHHHHHHHHhcccCCcEEEEEeecc---------CCCC-CcchHHHHHHHHHhh--ccCCcc
Q 018740 246 SSSIDAVHAGAAIHCWSSPSTGVAEISRVLRPGGVFVGTTYIV---------DGPF-NLIPFSRLLRQNMMQ--ISGSYT 313 (351)
Q Consensus 246 ~~~fD~V~~~~vl~h~~d~~~~l~~i~~~LkpgG~li~~~~~~---------~~~~-~~~~~~~~~~~~~~~--~~~~~~ 313 (351)
+++||+|++..+++|++++..++++++++|||||++++.++.. ++.. ........+...+.. ......
T Consensus 87 ~~~fD~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (284)
T 3gu3_A 87 NDKYDIAICHAFLLHMTTPETMLQKMIHSVKKGGKIICFEPHWISNMASYLLDGEKQSEFIQLGVLQKLFESDTQRNGKD 166 (284)
T ss_dssp SSCEEEEEEESCGGGCSSHHHHHHHHHHTEEEEEEEEEEECCHHHHHHSEEETTSCHHHHCCHHHHHHHHHHHHHHTCCC
T ss_pred CCCeeEEEECChhhcCCCHHHHHHHHHHHcCCCCEEEEEecchhcccccceecCcchhhccchHHHHHHHHHHhhhhccc
Confidence 4689999999999999999999999999999999999998761 1000 000001122221111 112345
Q ss_pred CCCHHHHHHHHHHCCCeEEEEEec
Q 018740 314 FLSEREIEDLCRACGLVDFKCTRN 337 (351)
Q Consensus 314 ~~s~~~l~~ll~~aGf~~v~~~~~ 337 (351)
+.+.+++.++|+++||++++....
T Consensus 167 ~~~~~~l~~~l~~aGF~~v~~~~~ 190 (284)
T 3gu3_A 167 GNIGMKIPIYLSELGVKNIECRVS 190 (284)
T ss_dssp TTGGGTHHHHHHHTTCEEEEEEEC
T ss_pred ccHHHHHHHHHHHcCCCeEEEEEc
Confidence 667789999999999999876443
No 35
>2yqz_A Hypothetical protein TTHA0223; RNA methyltransferase, SAM, structural genomics, NPPSFA; HET: SAM; 1.80A {Thermus thermophilus} PDB: 2yr0_A
Probab=99.85 E-value=2.1e-20 Score=167.56 Aligned_cols=154 Identities=19% Similarity=0.182 Sum_probs=120.2
Q ss_pred CCCCCCeEEEEcCccCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHhhhCCCCCCCeEEEEecCCCCCCCCCceeeEE
Q 018740 174 KPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLPFASSSIDAVH 253 (351)
Q Consensus 174 ~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~g~~~~~i~~~~~d~~~lp~~~~~fD~V~ 253 (351)
...++.+|||+|||+|.++..+++.+. +|+|+|+|+.+++.+++++... ..++.++.+|+.++++++++||+|+
T Consensus 36 ~~~~~~~vLDiG~G~G~~~~~l~~~~~--~v~~vD~s~~~~~~a~~~~~~~----~~~~~~~~~d~~~~~~~~~~fD~v~ 109 (263)
T 2yqz_A 36 PKGEEPVFLELGVGTGRIALPLIARGY--RYIALDADAAMLEVFRQKIAGV----DRKVQVVQADARAIPLPDESVHGVI 109 (263)
T ss_dssp CSSSCCEEEEETCTTSTTHHHHHTTTC--EEEEEESCHHHHHHHHHHTTTS----CTTEEEEESCTTSCCSCTTCEEEEE
T ss_pred CCCCCCEEEEeCCcCCHHHHHHHHCCC--EEEEEECCHHHHHHHHHHhhcc----CCceEEEEcccccCCCCCCCeeEEE
Confidence 445678999999999999999998865 9999999999999999987322 5789999999999998889999999
Q ss_pred eccccccCCChHHHHHHHHhcccCCcEEEEEeeccCCCCCcchHHHHHHHHHhhc----cCCccCCCHHHHHHHHHHCCC
Q 018740 254 AGAAIHCWSSPSTGVAEISRVLRPGGVFVGTTYIVDGPFNLIPFSRLLRQNMMQI----SGSYTFLSEREIEDLCRACGL 329 (351)
Q Consensus 254 ~~~vl~h~~d~~~~l~~i~~~LkpgG~li~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~s~~~l~~ll~~aGf 329 (351)
+..++||++|+..+++++.++|+|||.+++.....+ ......+...+....... ..+..+++.+++.++++++||
T Consensus 110 ~~~~l~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf 188 (263)
T 2yqz_A 110 VVHLWHLVPDWPKVLAEAIRVLKPGGALLEGWDQAE-ASPEWTLQERWRAFAAEEGFPVERGLHAKRLKEVEEALRRLGL 188 (263)
T ss_dssp EESCGGGCTTHHHHHHHHHHHEEEEEEEEEEEEEEC-CCHHHHHHHHHHHHHHHHTCCCCCCHHHHHHHHHHHHHHHTTC
T ss_pred ECCchhhcCCHHHHHHHHHHHCCCCcEEEEEecCCC-ccHHHHHHHHHHHHHHHhCCCcccccccCCHHHHHHHHHHcCC
Confidence 999999999999999999999999999998832221 111001222222222111 113456788999999999999
Q ss_pred eEEEE
Q 018740 330 VDFKC 334 (351)
Q Consensus 330 ~~v~~ 334 (351)
+++..
T Consensus 189 ~~~~~ 193 (263)
T 2yqz_A 189 KPRTR 193 (263)
T ss_dssp CCEEE
T ss_pred CcceE
Confidence 97664
No 36
>1pjz_A Thiopurine S-methyltransferase; polymorphism, S-adenosylmethionine, drug metabolism; NMR {Pseudomonas syringae PV} SCOP: c.66.1.36
Probab=99.85 E-value=8.7e-21 Score=164.26 Aligned_cols=148 Identities=14% Similarity=0.112 Sum_probs=113.9
Q ss_pred HhccCCCCCCeEEEEcCccCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHhhhC-----C----CCCCCeEEEEecCC
Q 018740 170 KGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQES-----N----FPKENFLLVRADIS 240 (351)
Q Consensus 170 ~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~-----g----~~~~~i~~~~~d~~ 240 (351)
...+...++.+|||+|||+|..+..+++.+. +|+|+|+|+.|++.|+++..... | ....+++++++|+.
T Consensus 15 ~~~l~~~~~~~vLD~GCG~G~~~~~la~~g~--~V~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~ 92 (203)
T 1pjz_A 15 WSSLNVVPGARVLVPLCGKSQDMSWLSGQGY--HVVGAELSEAAVERYFTERGEQPHITSQGDFKVYAAPGIEIWCGDFF 92 (203)
T ss_dssp HHHHCCCTTCEEEETTTCCSHHHHHHHHHCC--EEEEEEECHHHHHHHHHHHCSCSEEEEETTEEEEECSSSEEEEECCS
T ss_pred HHhcccCCCCEEEEeCCCCcHhHHHHHHCCC--eEEEEeCCHHHHHHHHHHccCCcccccccccccccCCccEEEECccc
Confidence 3334455678999999999999999999976 99999999999999998764310 0 01368999999999
Q ss_pred CCCCCC-CceeeEEeccccccCCCh--HHHHHHHHhcccCCcEEEEEeeccCCCCCcchHHHHHHHHHhhccCCccCCCH
Q 018740 241 RLPFAS-SSIDAVHAGAAIHCWSSP--STGVAEISRVLRPGGVFVGTTYIVDGPFNLIPFSRLLRQNMMQISGSYTFLSE 317 (351)
Q Consensus 241 ~lp~~~-~~fD~V~~~~vl~h~~d~--~~~l~~i~~~LkpgG~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~ 317 (351)
++++.+ ++||+|++..+++|++.. ..++++++++|||||++++.+...+.. ...+....++.
T Consensus 93 ~l~~~~~~~fD~v~~~~~l~~l~~~~~~~~l~~~~r~LkpgG~~~l~~~~~~~~---------------~~~~~~~~~~~ 157 (203)
T 1pjz_A 93 ALTARDIGHCAAFYDRAAMIALPADMRERYVQHLEALMPQACSGLLITLEYDQA---------------LLEGPPFSVPQ 157 (203)
T ss_dssp SSTHHHHHSEEEEEEESCGGGSCHHHHHHHHHHHHHHSCSEEEEEEEEESSCSS---------------SSSSCCCCCCH
T ss_pred cCCcccCCCEEEEEECcchhhCCHHHHHHHHHHHHHHcCCCcEEEEEEEecCcc---------------ccCCCCCCCCH
Confidence 998765 789999999999999754 468999999999999966655443210 01112234689
Q ss_pred HHHHHHHHHCCCeEEEEE
Q 018740 318 REIEDLCRACGLVDFKCT 335 (351)
Q Consensus 318 ~~l~~ll~~aGf~~v~~~ 335 (351)
+++.+++++ ||+++...
T Consensus 158 ~el~~~~~~-gf~i~~~~ 174 (203)
T 1pjz_A 158 TWLHRVMSG-NWEVTKVG 174 (203)
T ss_dssp HHHHHTSCS-SEEEEEEE
T ss_pred HHHHHHhcC-CcEEEEec
Confidence 999999998 99877643
No 37
>1kpg_A CFA synthase;, cyclopropane-fatty-acyl-phospholipid synthase 1; mixed alpha beta fold, structural genomics, PSI; HET: SAH 16A; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kp9_A* 1kph_A* 1tpy_A* 1l1e_A*
Probab=99.85 E-value=6e-20 Score=167.17 Aligned_cols=166 Identities=16% Similarity=0.109 Sum_probs=126.9
Q ss_pred HHHHHhccCCCCCCeEEEEcCccCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHhhhCCCCCCCeEEEEecCCCCCCC
Q 018740 166 FELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLPFA 245 (351)
Q Consensus 166 ~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~g~~~~~i~~~~~d~~~lp~~ 245 (351)
.+.+...+...++.+|||||||+|.++..+++.. ..+|+|+|+|+.+++.+++++... +. ..++.++.+|+.++|
T Consensus 53 ~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~-~~~v~gvd~s~~~~~~a~~~~~~~-~~-~~~~~~~~~d~~~~~-- 127 (287)
T 1kpg_A 53 IDLALGKLGLQPGMTLLDVGCGWGATMMRAVEKY-DVNVVGLTLSKNQANHVQQLVANS-EN-LRSKRVLLAGWEQFD-- 127 (287)
T ss_dssp HHHHHTTTTCCTTCEEEEETCTTSHHHHHHHHHH-CCEEEEEESCHHHHHHHHHHHHTC-CC-CSCEEEEESCGGGCC--
T ss_pred HHHHHHHcCCCCcCEEEEECCcccHHHHHHHHHc-CCEEEEEECCHHHHHHHHHHHHhc-CC-CCCeEEEECChhhCC--
Confidence 4556667777778899999999999999998543 239999999999999999988765 21 358999999998776
Q ss_pred CCceeeEEeccccccC--CChHHHHHHHHhcccCCcEEEEEeeccCCCCC-------cchHHHHHHHHHhh-ccCCccCC
Q 018740 246 SSSIDAVHAGAAIHCW--SSPSTGVAEISRVLRPGGVFVGTTYIVDGPFN-------LIPFSRLLRQNMMQ-ISGSYTFL 315 (351)
Q Consensus 246 ~~~fD~V~~~~vl~h~--~d~~~~l~~i~~~LkpgG~li~~~~~~~~~~~-------~~~~~~~~~~~~~~-~~~~~~~~ 315 (351)
++||+|++..+++|+ .++..+++++.++|||||.+++.++....... .............. ......++
T Consensus 128 -~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 206 (287)
T 1kpg_A 128 -EPVDRIVSIGAFEHFGHERYDAFFSLAHRLLPADGVMLLHTITGLHPKEIHERGLPMSFTFARFLKFIVTEIFPGGRLP 206 (287)
T ss_dssp -CCCSEEEEESCGGGTCTTTHHHHHHHHHHHSCTTCEEEEEEEEECCHHHHTTTTCSCHHHHHHHHHHHHHHTSTTCCCC
T ss_pred -CCeeEEEEeCchhhcChHHHHHHHHHHHHhcCCCCEEEEEEecCCCccccccccccccccccchhhhHHheeCCCCCCC
Confidence 789999999999999 67889999999999999999999987643110 00000111111111 12234567
Q ss_pred CHHHHHHHHHHCCCeEEEEEec
Q 018740 316 SEREIEDLCRACGLVDFKCTRN 337 (351)
Q Consensus 316 s~~~l~~ll~~aGf~~v~~~~~ 337 (351)
+.+++.++++++||++++....
T Consensus 207 s~~~~~~~l~~aGf~~~~~~~~ 228 (287)
T 1kpg_A 207 SIPMVQECASANGFTVTRVQSL 228 (287)
T ss_dssp CHHHHHHHHHTTTCEEEEEEEC
T ss_pred CHHHHHHHHHhCCcEEEEEEeC
Confidence 9999999999999999886543
No 38
>3ege_A Putative methyltransferase from antibiotic biosyn pathway; YP_324569.1, putative methyltransferase from antibiotic BIOS pathway; 2.40A {Anabaena variabilis atcc 29413}
Probab=99.84 E-value=1.1e-20 Score=170.03 Aligned_cols=155 Identities=20% Similarity=0.224 Sum_probs=124.0
Q ss_pred HHHHHHHhccCCCCCCeEEEEcCccCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHhhhCCCCCCCeEEEEecCCCCC
Q 018740 164 KEFELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLP 243 (351)
Q Consensus 164 ~~~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~g~~~~~i~~~~~d~~~lp 243 (351)
...+.+...+...++.+|||||||+|.++..+++.+ .+|+|+|+|+.+++.++++ .++.++++|+.++|
T Consensus 21 ~~~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~--~~v~gvD~s~~~~~~a~~~---------~~~~~~~~d~~~~~ 89 (261)
T 3ege_A 21 RIVNAIINLLNLPKGSVIADIGAGTGGYSVALANQG--LFVYAVEPSIVMRQQAVVH---------PQVEWFTGYAENLA 89 (261)
T ss_dssp HHHHHHHHHHCCCTTCEEEEETCTTSHHHHHHHTTT--CEEEEECSCHHHHHSSCCC---------TTEEEECCCTTSCC
T ss_pred HHHHHHHHHhCCCCCCEEEEEcCcccHHHHHHHhCC--CEEEEEeCCHHHHHHHHhc---------cCCEEEECchhhCC
Confidence 344566777777778899999999999999999865 4999999999999988753 48999999999999
Q ss_pred CCCCceeeEEeccccccCCChHHHHHHHHhcccCCcEEEEEeeccCCCCCcc--hHHHHHHHHHhhccCCccCCCHHHHH
Q 018740 244 FASSSIDAVHAGAAIHCWSSPSTGVAEISRVLRPGGVFVGTTYIVDGPFNLI--PFSRLLRQNMMQISGSYTFLSEREIE 321 (351)
Q Consensus 244 ~~~~~fD~V~~~~vl~h~~d~~~~l~~i~~~LkpgG~li~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~s~~~l~ 321 (351)
+++++||+|++..+++|++++..+++++.++|| ||.+++.++..+...... ........ ..+..+++.+++.
T Consensus 90 ~~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~Lk-gG~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~ 163 (261)
T 3ege_A 90 LPDKSVDGVISILAIHHFSHLEKSFQEMQRIIR-DGTIVLLTFDIRLAQRIWLYDYFPFLWE-----DALRFLPLDEQIN 163 (261)
T ss_dssp SCTTCBSEEEEESCGGGCSSHHHHHHHHHHHBC-SSCEEEEEECGGGCCCCGGGGTCHHHHH-----HHHTSCCHHHHHH
T ss_pred CCCCCEeEEEEcchHhhccCHHHHHHHHHHHhC-CcEEEEEEcCCchhHHHHHHHHHHHHhh-----hhhhhCCCHHHHH
Confidence 989999999999999999999999999999999 999988888754322111 11111111 1134577888999
Q ss_pred HHHHHCCCeEEEEEe
Q 018740 322 DLCRACGLVDFKCTR 336 (351)
Q Consensus 322 ~ll~~aGf~~v~~~~ 336 (351)
+|+++||++++...
T Consensus 164 -~l~~aGF~~v~~~~ 177 (261)
T 3ege_A 164 -LLQENTKRRVEAIP 177 (261)
T ss_dssp -HHHHHHCSEEEEEE
T ss_pred -HHHHcCCCceeEEE
Confidence 99999998887544
No 39
>3hem_A Cyclopropane-fatty-acyl-phospholipid synthase 2; protein-ligand complex, cytoplasm, lipid synthesis, methyltransferase; HET: D22; 2.39A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kpi_A*
Probab=99.84 E-value=5.9e-20 Score=168.62 Aligned_cols=167 Identities=13% Similarity=0.048 Sum_probs=128.5
Q ss_pred HHHHHhccCCCCCCeEEEEcCccCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHhhhCCCCCCCeEEEEecCCCCCCC
Q 018740 166 FELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLPFA 245 (351)
Q Consensus 166 ~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~g~~~~~i~~~~~d~~~lp~~ 245 (351)
.+.+...+...++.+|||||||+|.++..+++..+ .+|+|+|+|+.+++.|++++... |. ..++.++.+|+.++
T Consensus 61 ~~~~~~~~~~~~~~~vLDiGcG~G~~~~~la~~~~-~~v~gvD~s~~~~~~a~~~~~~~-~~-~~~v~~~~~d~~~~--- 134 (302)
T 3hem_A 61 RKLALDKLNLEPGMTLLDIGCGWGSTMRHAVAEYD-VNVIGLTLSENQYAHDKAMFDEV-DS-PRRKEVRIQGWEEF--- 134 (302)
T ss_dssp HHHHHHTTCCCTTCEEEEETCTTSHHHHHHHHHHC-CEEEEEECCHHHHHHHHHHHHHS-CC-SSCEEEEECCGGGC---
T ss_pred HHHHHHHcCCCCcCEEEEeeccCcHHHHHHHHhCC-CEEEEEECCHHHHHHHHHHHHhc-CC-CCceEEEECCHHHc---
Confidence 45566777777889999999999999999999832 49999999999999999998775 22 34799999999876
Q ss_pred CCceeeEEeccccccCCCh---------HHHHHHHHhcccCCcEEEEEeeccCCCCCcch-------HHHHHHHHHhh-c
Q 018740 246 SSSIDAVHAGAAIHCWSSP---------STGVAEISRVLRPGGVFVGTTYIVDGPFNLIP-------FSRLLRQNMMQ-I 308 (351)
Q Consensus 246 ~~~fD~V~~~~vl~h~~d~---------~~~l~~i~~~LkpgG~li~~~~~~~~~~~~~~-------~~~~~~~~~~~-~ 308 (351)
+++||+|++..+++|++|| ..+++++.++|||||++++.++.......... ....+...+.. .
T Consensus 135 ~~~fD~v~~~~~~~~~~d~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 214 (302)
T 3hem_A 135 DEPVDRIVSLGAFEHFADGAGDAGFERYDTFFKKFYNLTPDDGRMLLHTITIPDKEEAQELGLTSPMSLLRFIKFILTEI 214 (302)
T ss_dssp CCCCSEEEEESCGGGTTCCSSCCCTTHHHHHHHHHHHSSCTTCEEEEEEEECCCHHHHHHHTCCCCHHHHHHHHHHHHHT
T ss_pred CCCccEEEEcchHHhcCccccccchhHHHHHHHHHHHhcCCCcEEEEEEEeccCccchhhccccccccccchHHHHHHhc
Confidence 6889999999999999887 69999999999999999999887542110000 00000111111 1
Q ss_pred cCCccCCCHHHHHHHHHHCCCeEEEEEecC
Q 018740 309 SGSYTFLSEREIEDLCRACGLVDFKCTRNR 338 (351)
Q Consensus 309 ~~~~~~~s~~~l~~ll~~aGf~~v~~~~~g 338 (351)
.......+.+++.++++++||++++....+
T Consensus 215 ~p~~~~~s~~~~~~~l~~aGf~~~~~~~~~ 244 (302)
T 3hem_A 215 FPGGRLPRISQVDYYSSNAGWKVERYHRIG 244 (302)
T ss_dssp CTTCCCCCHHHHHHHHHHHTCEEEEEEECG
T ss_pred CCCCCCCCHHHHHHHHHhCCcEEEEEEeCc
Confidence 123357789999999999999998876544
No 40
>3dli_A Methyltransferase; PSI-II, NYSGXRC, structural genomics, protein structure initiative; 2.46A {Archaeoglobus fulgidus}
Probab=99.84 E-value=2.5e-20 Score=165.36 Aligned_cols=152 Identities=14% Similarity=0.160 Sum_probs=122.3
Q ss_pred HHHHHhccC-CCCCCeEEEEcCccCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHhhhCCCCCCCeEEEEecCCCC--
Q 018740 166 FELMKGYLK-PVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRL-- 242 (351)
Q Consensus 166 ~~~l~~~l~-~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~g~~~~~i~~~~~d~~~l-- 242 (351)
.+.+...+. ..++.+|||||||+|.++..+++.+. +|+|+|+|+.+++.+++ ++.++.+|+.+.
T Consensus 29 ~~~~~~~l~~~~~~~~vLDiGcG~G~~~~~l~~~~~--~v~gvD~s~~~~~~a~~-----------~~~~~~~d~~~~~~ 95 (240)
T 3dli_A 29 KARLRRYIPYFKGCRRVLDIGCGRGEFLELCKEEGI--ESIGVDINEDMIKFCEG-----------KFNVVKSDAIEYLK 95 (240)
T ss_dssp HHHHGGGGGGTTTCSCEEEETCTTTHHHHHHHHHTC--CEEEECSCHHHHHHHHT-----------TSEEECSCHHHHHH
T ss_pred HHHHHHHHhhhcCCCeEEEEeCCCCHHHHHHHhCCC--cEEEEECCHHHHHHHHh-----------hcceeeccHHHHhh
Confidence 344544443 23568999999999999999999876 89999999999999985 277888998775
Q ss_pred CCCCCceeeEEeccccccCCCh--HHHHHHHHhcccCCcEEEEEeeccCCCCCcchHHHHHHHHHhhccCCccCCCHHHH
Q 018740 243 PFASSSIDAVHAGAAIHCWSSP--STGVAEISRVLRPGGVFVGTTYIVDGPFNLIPFSRLLRQNMMQISGSYTFLSEREI 320 (351)
Q Consensus 243 p~~~~~fD~V~~~~vl~h~~d~--~~~l~~i~~~LkpgG~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~l 320 (351)
++++++||+|++..+++|++++ ..+++++.++|||||++++.+++.... . ..... .....+..+++.+++
T Consensus 96 ~~~~~~fD~i~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~---~----~~~~~-~~~~~~~~~~~~~~l 167 (240)
T 3dli_A 96 SLPDKYLDGVMISHFVEHLDPERLFELLSLCYSKMKYSSYIVIESPNPTSL---Y----SLINF-YIDPTHKKPVHPETL 167 (240)
T ss_dssp TSCTTCBSEEEEESCGGGSCGGGHHHHHHHHHHHBCTTCCEEEEEECTTSH---H----HHHHH-TTSTTCCSCCCHHHH
T ss_pred hcCCCCeeEEEECCchhhCCcHHHHHHHHHHHHHcCCCcEEEEEeCCcchh---H----HHHHH-hcCccccccCCHHHH
Confidence 7788999999999999999966 899999999999999999999875421 1 11111 223457788999999
Q ss_pred HHHHHHCCCeEEEEEecC
Q 018740 321 EDLCRACGLVDFKCTRNR 338 (351)
Q Consensus 321 ~~ll~~aGf~~v~~~~~g 338 (351)
.++++++||++++.....
T Consensus 168 ~~~l~~aGf~~~~~~~~~ 185 (240)
T 3dli_A 168 KFILEYLGFRDVKIEFFE 185 (240)
T ss_dssp HHHHHHHTCEEEEEEEEC
T ss_pred HHHHHHCCCeEEEEEEec
Confidence 999999999998865543
No 41
>2xvm_A Tellurite resistance protein TEHB; antibiotic resistance, transferase; HET: SAH; 1.48A {Escherichia coli} PDB: 2xva_A* 4dq0_A* 2i6g_A*
Probab=99.84 E-value=7.6e-20 Score=156.93 Aligned_cols=147 Identities=20% Similarity=0.224 Sum_probs=119.2
Q ss_pred HHHhccCCCCCCeEEEEcCccCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHhhhCCCCCCCeEEEEecCCCCCCCCC
Q 018740 168 LMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLPFASS 247 (351)
Q Consensus 168 ~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~g~~~~~i~~~~~d~~~lp~~~~ 247 (351)
.+...+...++.+|||+|||+|.++..+++.+. +++|+|+|+.+++.+++++... + ..++.++.+|+.++++ ++
T Consensus 23 ~l~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~--~v~~vD~s~~~~~~a~~~~~~~-~--~~~~~~~~~d~~~~~~-~~ 96 (199)
T 2xvm_A 23 EVLEAVKVVKPGKTLDLGCGNGRNSLYLAANGY--DVDAWDKNAMSIANVERIKSIE-N--LDNLHTRVVDLNNLTF-DR 96 (199)
T ss_dssp HHHHHTTTSCSCEEEEETCTTSHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHHHH-T--CTTEEEEECCGGGCCC-CC
T ss_pred HHHHHhhccCCCeEEEEcCCCCHHHHHHHHCCC--eEEEEECCHHHHHHHHHHHHhC-C--CCCcEEEEcchhhCCC-CC
Confidence 344455555678999999999999999999865 9999999999999999988766 1 3579999999999887 78
Q ss_pred ceeeEEeccccccCC--ChHHHHHHHHhcccCCcEEEEEeeccCCCCCcchHHHHHHHHHhhccCCccCCCHHHHHHHHH
Q 018740 248 SIDAVHAGAAIHCWS--SPSTGVAEISRVLRPGGVFVGTTYIVDGPFNLIPFSRLLRQNMMQISGSYTFLSEREIEDLCR 325 (351)
Q Consensus 248 ~fD~V~~~~vl~h~~--d~~~~l~~i~~~LkpgG~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~~ll~ 325 (351)
+||+|++..+++|++ ++..+++++.++|+|||.+++.++........ ...+...++.+++.++++
T Consensus 97 ~~D~v~~~~~l~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~~~~~~~~-------------~~~~~~~~~~~~l~~~~~ 163 (199)
T 2xvm_A 97 QYDFILSTVVLMFLEAKTIPGLIANMQRCTKPGGYNLIVAAMDTADYPC-------------TVGFPFAFKEGELRRYYE 163 (199)
T ss_dssp CEEEEEEESCGGGSCGGGHHHHHHHHHHTEEEEEEEEEEEEBCCSSSCC-------------CSCCSCCBCTTHHHHHTT
T ss_pred CceEEEEcchhhhCCHHHHHHHHHHHHHhcCCCeEEEEEEeeccCCcCC-------------CCCCCCccCHHHHHHHhc
Confidence 999999999999998 77899999999999999988877654321110 112345679999999998
Q ss_pred HCCCeEEEEE
Q 018740 326 ACGLVDFKCT 335 (351)
Q Consensus 326 ~aGf~~v~~~ 335 (351)
+ |++++..
T Consensus 164 ~--f~~~~~~ 171 (199)
T 2xvm_A 164 G--WERVKYN 171 (199)
T ss_dssp T--SEEEEEE
T ss_pred C--CeEEEec
Confidence 7 9887743
No 42
>3pfg_A N-methyltransferase; N,N-dimethyltransferase, SAM binding, DTDP-linked sugar BIND transferase; HET: SAM TLO; 1.35A {Streptomyces fradiae} PDB: 3pfh_A* 3px3_A* 3px2_A*
Probab=99.84 E-value=1.9e-20 Score=168.30 Aligned_cols=171 Identities=19% Similarity=0.227 Sum_probs=125.3
Q ss_pred HHHHhccCCCCCCeEEEEcCccCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHhhhCCCCCCCeEEEEecCCCCCCCC
Q 018740 167 ELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLPFAS 246 (351)
Q Consensus 167 ~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~g~~~~~i~~~~~d~~~lp~~~ 246 (351)
+.+...+. ++.+|||||||+|.++..+++.+. +|+|+|+|+.+++.|+++ ..++.++++|+.++++ +
T Consensus 42 ~~l~~~~~--~~~~vLDiGcG~G~~~~~l~~~~~--~v~gvD~s~~~~~~a~~~--------~~~~~~~~~d~~~~~~-~ 108 (263)
T 3pfg_A 42 ALVRRHSP--KAASLLDVACGTGMHLRHLADSFG--TVEGLELSADMLAIARRR--------NPDAVLHHGDMRDFSL-G 108 (263)
T ss_dssp HHHHHHCT--TCCEEEEETCTTSHHHHHHTTTSS--EEEEEESCHHHHHHHHHH--------CTTSEEEECCTTTCCC-S
T ss_pred HHHHhhCC--CCCcEEEeCCcCCHHHHHHHHcCC--eEEEEECCHHHHHHHHhh--------CCCCEEEECChHHCCc-c
Confidence 34444433 367999999999999999999876 999999999999999987 4578999999999887 7
Q ss_pred CceeeEEecc-ccccCC---ChHHHHHHHHhcccCCcEEEEEeeccCCCCCcchH-----------HHHHHH--------
Q 018740 247 SSIDAVHAGA-AIHCWS---SPSTGVAEISRVLRPGGVFVGTTYIVDGPFNLIPF-----------SRLLRQ-------- 303 (351)
Q Consensus 247 ~~fD~V~~~~-vl~h~~---d~~~~l~~i~~~LkpgG~li~~~~~~~~~~~~~~~-----------~~~~~~-------- 303 (351)
++||+|++.. +++|++ +...+|+++.++|+|||.+++.++..........+ ...++.
T Consensus 109 ~~fD~v~~~~~~l~~~~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 188 (263)
T 3pfg_A 109 RRFSAVTCMFSSIGHLAGQAELDAALERFAAHVLPDGVVVVEPWWFPENFTPGYVAAGTVEAGGTTVTRVSHSSREGEAT 188 (263)
T ss_dssp CCEEEEEECTTGGGGSCHHHHHHHHHHHHHHTEEEEEEEEECCCCCTTTCCTTEEEEEEEEETTEEEEEEEEEEEETTEE
T ss_pred CCcCEEEEcCchhhhcCCHHHHHHHHHHHHHhcCCCcEEEEEeccChhhccccccccceeccCCceeEEEEEEEecCcEE
Confidence 8999999998 999997 44588999999999999999975432211000000 000000
Q ss_pred -------------HHh--hccCCccCCCHHHHHHHHHHCCCeEEEEEec-CeEEEEEEecCCC
Q 018740 304 -------------NMM--QISGSYTFLSEREIEDLCRACGLVDFKCTRN-RGFVMFTATKPSQ 350 (351)
Q Consensus 304 -------------~~~--~~~~~~~~~s~~~l~~ll~~aGf~~v~~~~~-g~~~~~~a~kp~~ 350 (351)
.+. ....+.++++.+++.++|+++||++++.... +...+++++||..
T Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~el~~ll~~aGF~v~~~~~~~~~~~~~va~K~a~ 251 (263)
T 3pfg_A 189 RIEVHYLVAGPDRGITHHEESHRITLFTREQYERAFTAAGLSVEFMPGGPSGRGLFTGLPGAK 251 (263)
T ss_dssp EEEEEEEEEETTTEEEEEEEEEEEECCCHHHHHHHHHHTTEEEEEESSTTTSSCEEEEEECC-
T ss_pred EEEEEEEEecCCCcEEEEEEEEEEEeecHHHHHHHHHHCCCEEEEeeCCCCCceeEEEecCCC
Confidence 000 0011256789999999999999999885432 3456678888763
No 43
>2aot_A HMT, histamine N-methyltransferase; classic methyltransferase fold, protein-drug complex; HET: CSO 2PM SAH; 1.90A {Homo sapiens} SCOP: c.66.1.19 PDB: 1jqd_A* 2aou_A* 2aov_A* 2aox_A* 1jqe_A* 2aow_A*
Probab=99.84 E-value=2.4e-20 Score=170.44 Aligned_cols=152 Identities=11% Similarity=0.061 Sum_probs=111.4
Q ss_pred CCCCeEEEEcCccCHHHH----HHHHhCCCCeE--EEEeCCHHHHHHHHHHHhhhCCCCCCCeEE--EEecCCCCC----
Q 018740 176 VLGGNIIDASCGSGLFSR----IFAKSGLFSLV--VALDYSENMLKQCYEFVQQESNFPKENFLL--VRADISRLP---- 243 (351)
Q Consensus 176 ~~~~~vLDiGcG~G~~~~----~l~~~~~~~~v--~gvD~s~~~~~~a~~~~~~~~g~~~~~i~~--~~~d~~~lp---- 243 (351)
.++.+|||||||+|.++. .+...++...+ +|+|+|+.|++.|++++....+ ..++.+ ..+++++++
T Consensus 51 ~~~~~VLDiG~GtG~~~~~~l~~l~~~~~~~~v~~~~vD~S~~ml~~a~~~~~~~~~--~~~v~~~~~~~~~~~~~~~~~ 128 (292)
T 2aot_A 51 KSEIKILSIGGGAGEIDLQILSKVQAQYPGVCINNEVVEPSAEQIAKYKELVAKTSN--LENVKFAWHKETSSEYQSRML 128 (292)
T ss_dssp CSEEEEEEETCTTSHHHHHHHHHHHHHSTTCEEEEEEECSCHHHHHHHHHHHHTCSS--CTTEEEEEECSCHHHHHHHHH
T ss_pred CCCCeEEEEcCCCCHHHHHHHHHHHhhCCCceeeEEEEeCCHHHHHHHHHHHHhccC--CCcceEEEEecchhhhhhhhc
Confidence 456799999999997654 34444555544 9999999999999998765311 244544 455555443
Q ss_pred --CCCCceeeEEeccccccCCChHHHHHHHHhcccCCcEEEEEeeccCCCCCcchHHHHHHHHHhh--ccCCccCCCHHH
Q 018740 244 --FASSSIDAVHAGAAIHCWSSPSTGVAEISRVLRPGGVFVGTTYIVDGPFNLIPFSRLLRQNMMQ--ISGSYTFLSERE 319 (351)
Q Consensus 244 --~~~~~fD~V~~~~vl~h~~d~~~~l~~i~~~LkpgG~li~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~s~~~ 319 (351)
+++++||+|++.+++||++|+..+|++++++|||||++++.....+. .+...+...... ...+..+++.++
T Consensus 129 ~~~~~~~fD~V~~~~~l~~~~d~~~~l~~~~r~LkpgG~l~i~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~ 203 (292)
T 2aot_A 129 EKKELQKWDFIHMIQMLYYVKDIPATLKFFHSLLGTNAKMLIIVVSGSS-----GWDKLWKKYGSRFPQDDLCQYITSDD 203 (292)
T ss_dssp TTTCCCCEEEEEEESCGGGCSCHHHHHHHHHHTEEEEEEEEEEEECTTS-----HHHHHHHHHGGGSCCCTTCCCCCHHH
T ss_pred cccCCCceeEEEEeeeeeecCCHHHHHHHHHHHcCCCcEEEEEEecCCc-----cHHHHHHHHHHhccCCCcccCCCHHH
Confidence 56789999999999999999999999999999999999998765431 222222222211 112456889999
Q ss_pred HHHHHHHCCCeEEEE
Q 018740 320 IEDLCRACGLVDFKC 334 (351)
Q Consensus 320 l~~ll~~aGf~~v~~ 334 (351)
+.++|+++||+++..
T Consensus 204 ~~~~l~~aGf~~~~~ 218 (292)
T 2aot_A 204 LTQMLDNLGLKYECY 218 (292)
T ss_dssp HHHHHHHHTCCEEEE
T ss_pred HHHHHHHCCCceEEE
Confidence 999999999988763
No 44
>1xtp_A LMAJ004091AAA; SGPP, structural genomics, PSI, protein structure initiative dependent methyltransferase; HET: SAI; 1.94A {Leishmania major} SCOP: c.66.1.42
Probab=99.84 E-value=1.7e-20 Score=167.52 Aligned_cols=154 Identities=12% Similarity=0.056 Sum_probs=124.0
Q ss_pred HHHHhccCCCCCCeEEEEcCccCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHhhhCCCCCCCeEEEEecCCCCCCCC
Q 018740 167 ELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLPFAS 246 (351)
Q Consensus 167 ~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~g~~~~~i~~~~~d~~~lp~~~ 246 (351)
..+...+...++.+|||||||+|.++..+++.+ ..+|+|+|+|+.+++.+++++... .++.++++|+..+++++
T Consensus 83 ~~~l~~l~~~~~~~vLDiG~G~G~~~~~l~~~~-~~~v~~vD~s~~~~~~a~~~~~~~-----~~~~~~~~d~~~~~~~~ 156 (254)
T 1xtp_A 83 RNFIASLPGHGTSRALDCGAGIGRITKNLLTKL-YATTDLLEPVKHMLEEAKRELAGM-----PVGKFILASMETATLPP 156 (254)
T ss_dssp HHHHHTSTTCCCSEEEEETCTTTHHHHHTHHHH-CSEEEEEESCHHHHHHHHHHTTTS-----SEEEEEESCGGGCCCCS
T ss_pred HHHHHhhcccCCCEEEEECCCcCHHHHHHHHhh-cCEEEEEeCCHHHHHHHHHHhccC-----CceEEEEccHHHCCCCC
Confidence 344555566678899999999999999998886 347999999999999999985432 67999999999998888
Q ss_pred CceeeEEeccccccCC--ChHHHHHHHHhcccCCcEEEEEeeccCCCCCcchHHHHHHHHHhhccCCccCCCHHHHHHHH
Q 018740 247 SSIDAVHAGAAIHCWS--SPSTGVAEISRVLRPGGVFVGTTYIVDGPFNLIPFSRLLRQNMMQISGSYTFLSEREIEDLC 324 (351)
Q Consensus 247 ~~fD~V~~~~vl~h~~--d~~~~l~~i~~~LkpgG~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~~ll 324 (351)
++||+|++..+++|++ ++..+|+++.++|+|||++++.++........ .....+..+++.+++.+++
T Consensus 157 ~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~l 225 (254)
T 1xtp_A 157 NTYDLIVIQWTAIYLTDADFVKFFKHCQQALTPNGYIFFKENCSTGDRFL-----------VDKEDSSLTRSDIHYKRLF 225 (254)
T ss_dssp SCEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEBC--CCEE-----------EETTTTEEEBCHHHHHHHH
T ss_pred CCeEEEEEcchhhhCCHHHHHHHHHHHHHhcCCCeEEEEEecCCCcccce-----------ecccCCcccCCHHHHHHHH
Confidence 9999999999999995 47899999999999999999998754321110 1112234467999999999
Q ss_pred HHCCCeEEEEEec
Q 018740 325 RACGLVDFKCTRN 337 (351)
Q Consensus 325 ~~aGf~~v~~~~~ 337 (351)
+++||++++....
T Consensus 226 ~~aGf~~~~~~~~ 238 (254)
T 1xtp_A 226 NESGVRVVKEAFQ 238 (254)
T ss_dssp HHHTCCEEEEEEC
T ss_pred HHCCCEEEEeeec
Confidence 9999999886543
No 45
>1x19_A CRTF-related protein; methyltransferase, bacteriochllochlorophyll, BCHU, SAM, SAH, adenosylmethyonine, S-adenosylhomocysteine, ADO-Met; 2.27A {Chlorobium tepidum} PDB: 1x1a_A* 1x1b_A* 1x1c_A* 1x1d_A*
Probab=99.84 E-value=1.9e-19 Score=169.30 Aligned_cols=176 Identities=16% Similarity=0.170 Sum_probs=136.8
Q ss_pred HHHHHhccCCCCCCeEEEEcCccCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHhhhCCCCCCCeEEEEecCCCCCCC
Q 018740 166 FELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLPFA 245 (351)
Q Consensus 166 ~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~g~~~~~i~~~~~d~~~lp~~ 245 (351)
.+.+.+.+...++.+|||||||+|.++..+++..+..+++++|+ +.+++.+++++... +. ..+++++.+|+.+.+++
T Consensus 179 ~~~l~~~~~~~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~-~~-~~~v~~~~~d~~~~~~~ 255 (359)
T 1x19_A 179 IQLLLEEAKLDGVKKMIDVGGGIGDISAAMLKHFPELDSTILNL-PGAIDLVNENAAEK-GV-ADRMRGIAVDIYKESYP 255 (359)
T ss_dssp HHHHHHHCCCTTCCEEEEESCTTCHHHHHHHHHCTTCEEEEEEC-GGGHHHHHHHHHHT-TC-TTTEEEEECCTTTSCCC
T ss_pred HHHHHHhcCCCCCCEEEEECCcccHHHHHHHHHCCCCeEEEEec-HHHHHHHHHHHHhc-CC-CCCEEEEeCccccCCCC
Confidence 34555666666778999999999999999999988889999999 99999999988765 21 34699999999988765
Q ss_pred CCceeeEEeccccccCCC--hHHHHHHHHhcccCCcEEEEEeeccCCCCCcchHHHHHHHHHhh---ccCCccCCCHHHH
Q 018740 246 SSSIDAVHAGAAIHCWSS--PSTGVAEISRVLRPGGVFVGTTYIVDGPFNLIPFSRLLRQNMMQ---ISGSYTFLSEREI 320 (351)
Q Consensus 246 ~~~fD~V~~~~vl~h~~d--~~~~l~~i~~~LkpgG~li~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~s~~~l 320 (351)
+. |+|++..++||+++ ...+|++++++|+|||++++.++..+.. ..+........+.. ......+++.+++
T Consensus 256 ~~--D~v~~~~vlh~~~d~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~--~~~~~~~~~~~~~~~~~g~~~~~~~t~~e~ 331 (359)
T 1x19_A 256 EA--DAVLFCRILYSANEQLSTIMCKKAFDAMRSGGRLLILDMVIDDP--ENPNFDYLSHYILGAGMPFSVLGFKEQARY 331 (359)
T ss_dssp CC--SEEEEESCGGGSCHHHHHHHHHHHHTTCCTTCEEEEEEECCCCT--TSCCHHHHHHHGGGGGSSCCCCCCCCGGGH
T ss_pred CC--CEEEEechhccCCHHHHHHHHHHHHHhcCCCCEEEEEecccCCC--CCchHHHHHHHHHhcCCCCcccCCCCHHHH
Confidence 44 99999999999988 6789999999999999999988765432 11222222211111 1112345899999
Q ss_pred HHHHHHCCCeEEEEEecCeEEEEEEecC
Q 018740 321 EDLCRACGLVDFKCTRNRGFVMFTATKP 348 (351)
Q Consensus 321 ~~ll~~aGf~~v~~~~~g~~~~~~a~kp 348 (351)
.++++++||++++....+...++.++||
T Consensus 332 ~~ll~~aGf~~v~~~~~~~~~vi~a~kp 359 (359)
T 1x19_A 332 KEILESLGYKDVTMVRKYDHLLVQAVKP 359 (359)
T ss_dssp HHHHHHHTCEEEEEEEETTEEEEEEECC
T ss_pred HHHHHHCCCceEEEEecCCceEEEEeCC
Confidence 9999999999998766556778888886
No 46
>3bkw_A MLL3908 protein, S-adenosylmethionine dependent methyltransferase; NP_104914.1; HET: MSE; 1.60A {Mesorhizobium loti}
Probab=99.84 E-value=5.3e-20 Score=163.05 Aligned_cols=162 Identities=23% Similarity=0.269 Sum_probs=123.3
Q ss_pred HHHhccCCCCCCeEEEEcCccCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHhhhCCCCCCCeEEEEecCCCCCCCCC
Q 018740 168 LMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLPFASS 247 (351)
Q Consensus 168 ~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~g~~~~~i~~~~~d~~~lp~~~~ 247 (351)
.+...+...++.+|||||||+|.++..+++.+. .+++|+|+|+.+++.++++.. ..++.++.+|+..++++++
T Consensus 34 ~l~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~-~~v~~vD~s~~~~~~a~~~~~------~~~~~~~~~d~~~~~~~~~ 106 (243)
T 3bkw_A 34 ALRAMLPEVGGLRIVDLGCGFGWFCRWAHEHGA-SYVLGLDLSEKMLARARAAGP------DTGITYERADLDKLHLPQD 106 (243)
T ss_dssp HHHHHSCCCTTCEEEEETCTTCHHHHHHHHTTC-SEEEEEESCHHHHHHHHHTSC------SSSEEEEECCGGGCCCCTT
T ss_pred HHHHhccccCCCEEEEEcCcCCHHHHHHHHCCC-CeEEEEcCCHHHHHHHHHhcc------cCCceEEEcChhhccCCCC
Confidence 456666666788999999999999999998853 389999999999999998642 2479999999999888889
Q ss_pred ceeeEEeccccccCCChHHHHHHHHhcccCCcEEEEEeeccCCCCCcc-------------hHHHHH-----HHHHhhcc
Q 018740 248 SIDAVHAGAAIHCWSSPSTGVAEISRVLRPGGVFVGTTYIVDGPFNLI-------------PFSRLL-----RQNMMQIS 309 (351)
Q Consensus 248 ~fD~V~~~~vl~h~~d~~~~l~~i~~~LkpgG~li~~~~~~~~~~~~~-------------~~~~~~-----~~~~~~~~ 309 (351)
+||+|++..+++|++++..+++++.++|+|||.+++.+++........ +..... ...+....
T Consensus 107 ~fD~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (243)
T 3bkw_A 107 SFDLAYSSLALHYVEDVARLFRTVHQALSPGGHFVFSTEHPIYMAPARPGWAIDAEGRRTWPIDRYLVEGPRKTDWLAKG 186 (243)
T ss_dssp CEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEEECHHHHCCSSCSCEECTTSCEEEEECCTTCCEEECTTHHHHS
T ss_pred CceEEEEeccccccchHHHHHHHHHHhcCcCcEEEEEeCCcccccCcCcceeecCCCceEEeecccccccceeeeeccCc
Confidence 999999999999999999999999999999999999886531000000 000000 00000011
Q ss_pred CCccCCCHHHHHHHHHHCCCeEEEEEe
Q 018740 310 GSYTFLSEREIEDLCRACGLVDFKCTR 336 (351)
Q Consensus 310 ~~~~~~s~~~l~~ll~~aGf~~v~~~~ 336 (351)
.+...++.+++.++|+++||++++...
T Consensus 187 ~~~~~~t~~~~~~~l~~aGF~~~~~~~ 213 (243)
T 3bkw_A 187 VVKHHRTVGTTLNALIRSGFAIEHVEE 213 (243)
T ss_dssp CCEEECCHHHHHHHHHHTTCEEEEEEE
T ss_pred eEEEeccHHHHHHHHHHcCCEeeeecc
Confidence 233456999999999999999988553
No 47
>2r3s_A Uncharacterized protein; methyltransferase domain, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 2.15A {Nostoc punctiforme}
Probab=99.84 E-value=2.5e-19 Score=166.66 Aligned_cols=177 Identities=12% Similarity=0.154 Sum_probs=133.7
Q ss_pred HHHHhccCC--CCCCeEEEEcCccCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHhhhCCCCCCCeEEEEecCCCCCC
Q 018740 167 ELMKGYLKP--VLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLPF 244 (351)
Q Consensus 167 ~~l~~~l~~--~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~g~~~~~i~~~~~d~~~lp~ 244 (351)
..+...+.. .++.+|||+|||+|.++..+++..+..+++++|++ .+++.+++++... +. ..+++++.+|+.+.++
T Consensus 153 ~~~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~~-~~~~~a~~~~~~~-~~-~~~v~~~~~d~~~~~~ 229 (335)
T 2r3s_A 153 QLIAQLVNENKIEPLKVLDISASHGLFGIAVAQHNPNAEIFGVDWA-SVLEVAKENARIQ-GV-ASRYHTIAGSAFEVDY 229 (335)
T ss_dssp HHHHHHHTC--CCCSEEEEETCTTCHHHHHHHHHCTTCEEEEEECH-HHHHHHHHHHHHH-TC-GGGEEEEESCTTTSCC
T ss_pred HHHHHhcccccCCCCEEEEECCCcCHHHHHHHHHCCCCeEEEEecH-HHHHHHHHHHHhc-CC-CcceEEEecccccCCC
Confidence 344555554 56789999999999999999999777799999999 9999999988765 21 2469999999988776
Q ss_pred CCCceeeEEeccccccCCCh--HHHHHHHHhcccCCcEEEEEeeccCCCCCcchHHHHHHH-HHhhccCCccCCCHHHHH
Q 018740 245 ASSSIDAVHAGAAIHCWSSP--STGVAEISRVLRPGGVFVGTTYIVDGPFNLIPFSRLLRQ-NMMQISGSYTFLSEREIE 321 (351)
Q Consensus 245 ~~~~fD~V~~~~vl~h~~d~--~~~l~~i~~~LkpgG~li~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~s~~~l~ 321 (351)
+++ ||+|++.+++||++++ ..+|++++++|+|||.+++.++..+... ..+....... .......+...++.+++.
T Consensus 230 ~~~-~D~v~~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~t~~~~~ 307 (335)
T 2r3s_A 230 GND-YDLVLLPNFLHHFDVATCEQLLRKIKTALAVEGKVIVFDFIPNSDR-ITPPDAAAFSLVMLATTPNGDAYTFAEYE 307 (335)
T ss_dssp CSC-EEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEECCCCTTS-SCSHHHHHHHHHHHHHSSSCCCCCHHHHH
T ss_pred CCC-CcEEEEcchhccCCHHHHHHHHHHHHHhCCCCcEEEEEeecCCCCc-CCchHHHHHHHHHHeeCCCCCcCCHHHHH
Confidence 554 9999999999999766 5999999999999999999888764321 1122222211 111222245678999999
Q ss_pred HHHHHCCCeEEEEEec-CeEEEEEEecC
Q 018740 322 DLCRACGLVDFKCTRN-RGFVMFTATKP 348 (351)
Q Consensus 322 ~ll~~aGf~~v~~~~~-g~~~~~~a~kp 348 (351)
++++++||++++.... +...++.+++|
T Consensus 308 ~ll~~aGf~~~~~~~~~~~~~~i~~~~~ 335 (335)
T 2r3s_A 308 SMFSNAGFSHSQLHSLPTTQQQVIVAYK 335 (335)
T ss_dssp HHHHHTTCSEEEEECCTTSSSEEEEEEC
T ss_pred HHHHHCCCCeeeEEECCCCceeEEEecC
Confidence 9999999999986653 33445555554
No 48
>4hg2_A Methyltransferase type 11; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MES; 1.60A {Anaeromyxobacter dehalogenans}
Probab=99.84 E-value=1.5e-20 Score=168.41 Aligned_cols=114 Identities=28% Similarity=0.360 Sum_probs=100.4
Q ss_pred cHHHHHHHHhccCCCCCCeEEEEcCccCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHhhhCCCCCCCeEEEEecCCC
Q 018740 162 PEKEFELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISR 241 (351)
Q Consensus 162 ~~~~~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~g~~~~~i~~~~~d~~~ 241 (351)
+.++++.+...... +.+|||||||+|.++..+++.+. +|+|+|+|+.|++.|++ .+++.++++|+++
T Consensus 26 p~~l~~~l~~~~~~--~~~vLDvGcGtG~~~~~l~~~~~--~v~gvD~s~~ml~~a~~---------~~~v~~~~~~~e~ 92 (257)
T 4hg2_A 26 PRALFRWLGEVAPA--RGDALDCGCGSGQASLGLAEFFE--RVHAVDPGEAQIRQALR---------HPRVTYAVAPAED 92 (257)
T ss_dssp CHHHHHHHHHHSSC--SSEEEEESCTTTTTHHHHHTTCS--EEEEEESCHHHHHTCCC---------CTTEEEEECCTTC
T ss_pred HHHHHHHHHHhcCC--CCCEEEEcCCCCHHHHHHHHhCC--EEEEEeCcHHhhhhhhh---------cCCceeehhhhhh
Confidence 45566777776544 56999999999999999999886 99999999999988764 4789999999999
Q ss_pred CCCCCCceeeEEeccccccCCChHHHHHHHHhcccCCcEEEEEeeccC
Q 018740 242 LPFASSSIDAVHAGAAIHCWSSPSTGVAEISRVLRPGGVFVGTTYIVD 289 (351)
Q Consensus 242 lp~~~~~fD~V~~~~vl~h~~d~~~~l~~i~~~LkpgG~li~~~~~~~ 289 (351)
+|+++++||+|++..++||+ ++..++++++|+|||||+|++..+...
T Consensus 93 ~~~~~~sfD~v~~~~~~h~~-~~~~~~~e~~rvLkpgG~l~~~~~~~~ 139 (257)
T 4hg2_A 93 TGLPPASVDVAIAAQAMHWF-DLDRFWAELRRVARPGAVFAAVTYGLT 139 (257)
T ss_dssp CCCCSSCEEEEEECSCCTTC-CHHHHHHHHHHHEEEEEEEEEEEECCC
T ss_pred hcccCCcccEEEEeeehhHh-hHHHHHHHHHHHcCCCCEEEEEECCCC
Confidence 99999999999999999776 788999999999999999999887654
No 49
>3lcc_A Putative methyl chloride transferase; halide methyltransferase; HET: SAH; 1.80A {Arabidopsis thaliana}
Probab=99.84 E-value=4.4e-20 Score=163.16 Aligned_cols=138 Identities=18% Similarity=0.241 Sum_probs=115.3
Q ss_pred CCeEEEEcCccCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHhhhCCCCCCCeEEEEecCCCCCCCCCceeeEEeccc
Q 018740 178 GGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLPFASSSIDAVHAGAA 257 (351)
Q Consensus 178 ~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~g~~~~~i~~~~~d~~~lp~~~~~fD~V~~~~v 257 (351)
+.+|||||||+|.++..+++.+. +|+|+|+|+.+++.+++++... + ...++.++++|+.+++ ++++||+|++..+
T Consensus 67 ~~~vLDiGcG~G~~~~~l~~~~~--~v~gvD~s~~~~~~a~~~~~~~-~-~~~~v~~~~~d~~~~~-~~~~fD~v~~~~~ 141 (235)
T 3lcc_A 67 LGRALVPGCGGGHDVVAMASPER--FVVGLDISESALAKANETYGSS-P-KAEYFSFVKEDVFTWR-PTELFDLIFDYVF 141 (235)
T ss_dssp CEEEEEETCTTCHHHHHHCBTTE--EEEEECSCHHHHHHHHHHHTTS-G-GGGGEEEECCCTTTCC-CSSCEEEEEEESS
T ss_pred CCCEEEeCCCCCHHHHHHHhCCC--eEEEEECCHHHHHHHHHHhhcc-C-CCcceEEEECchhcCC-CCCCeeEEEEChh
Confidence 45999999999999999988654 9999999999999999987653 0 1357999999999987 4568999999999
Q ss_pred cccCC--ChHHHHHHHHhcccCCcEEEEEeeccCCCCCcchHHHHHHHHHhhccCCccCCCHHHHHHHHHHCCCeEEEEE
Q 018740 258 IHCWS--SPSTGVAEISRVLRPGGVFVGTTYIVDGPFNLIPFSRLLRQNMMQISGSYTFLSEREIEDLCRACGLVDFKCT 335 (351)
Q Consensus 258 l~h~~--d~~~~l~~i~~~LkpgG~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~~ll~~aGf~~v~~~ 335 (351)
++|++ ++..+++++.++|+|||.+++..+...... ......++.+++.++++++||++++..
T Consensus 142 l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~----------------~~~~~~~~~~~~~~~l~~~Gf~~~~~~ 205 (235)
T 3lcc_A 142 FCAIEPEMRPAWAKSMYELLKPDGELITLMYPITDHV----------------GGPPYKVDVSTFEEVLVPIGFKAVSVE 205 (235)
T ss_dssp TTTSCGGGHHHHHHHHHHHEEEEEEEEEEECCCSCCC----------------SCSSCCCCHHHHHHHHGGGTEEEEEEE
T ss_pred hhcCCHHHHHHHHHHHHHHCCCCcEEEEEEecccccC----------------CCCCccCCHHHHHHHHHHcCCeEEEEE
Confidence 99998 888999999999999999999887654211 112334799999999999999998855
Q ss_pred e
Q 018740 336 R 336 (351)
Q Consensus 336 ~ 336 (351)
.
T Consensus 206 ~ 206 (235)
T 3lcc_A 206 E 206 (235)
T ss_dssp E
T ss_pred e
Confidence 3
No 50
>3gwz_A MMCR; methyltransferase, mitomycin, S-adenosyl methionine, transferase; HET: MSE SAH; 1.91A {Streptomyces lavendulae} PDB: 3gxo_A*
Probab=99.83 E-value=7e-19 Score=166.06 Aligned_cols=174 Identities=11% Similarity=0.086 Sum_probs=135.0
Q ss_pred HHHHHhccCCCCCCeEEEEcCccCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHhhhCCCCCCCeEEEEecCCCCCCC
Q 018740 166 FELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLPFA 245 (351)
Q Consensus 166 ~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~g~~~~~i~~~~~d~~~lp~~ 245 (351)
...+...+...+..+|||||||+|.++..+++.++..+++++|+ +.+++.+++++... +. ..+++++.+|+. .+++
T Consensus 191 ~~~l~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~-~l-~~~v~~~~~d~~-~~~p 266 (369)
T 3gwz_A 191 AGQVAAAYDFSGAATAVDIGGGRGSLMAAVLDAFPGLRGTLLER-PPVAEEARELLTGR-GL-ADRCEILPGDFF-ETIP 266 (369)
T ss_dssp HHHHHHHSCCTTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHHHHHHHHHHT-TC-TTTEEEEECCTT-TCCC
T ss_pred HHHHHHhCCCccCcEEEEeCCCccHHHHHHHHHCCCCeEEEEcC-HHHHHHHHHhhhhc-Cc-CCceEEeccCCC-CCCC
Confidence 34455555666678999999999999999999988889999999 99999999988765 22 468999999998 4555
Q ss_pred CCceeeEEeccccccCCChH--HHHHHHHhcccCCcEEEEEeeccCCCCCcchHHHHHHHHHhhccCCccCCCHHHHHHH
Q 018740 246 SSSIDAVHAGAAIHCWSSPS--TGVAEISRVLRPGGVFVGTTYIVDGPFNLIPFSRLLRQNMMQISGSYTFLSEREIEDL 323 (351)
Q Consensus 246 ~~~fD~V~~~~vl~h~~d~~--~~l~~i~~~LkpgG~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~~l 323 (351)
. .||+|++.+++||++++. .+|++++++|+|||++++.++..+.... +. ................++.+++.++
T Consensus 267 ~-~~D~v~~~~vlh~~~d~~~~~~L~~~~~~L~pgG~l~i~e~~~~~~~~--~~-~~~~d~~~~~~~~g~~~t~~e~~~l 342 (369)
T 3gwz_A 267 D-GADVYLIKHVLHDWDDDDVVRILRRIATAMKPDSRLLVIDNLIDERPA--AS-TLFVDLLLLVLVGGAERSESEFAAL 342 (369)
T ss_dssp S-SCSEEEEESCGGGSCHHHHHHHHHHHHTTCCTTCEEEEEEEBCCSSCC--HH-HHHHHHHHHHHHSCCCBCHHHHHHH
T ss_pred C-CceEEEhhhhhccCCHHHHHHHHHHHHHHcCCCCEEEEEEeccCCCCC--Cc-hhHhhHHHHhhcCCccCCHHHHHHH
Confidence 5 799999999999999886 7999999999999999999887653321 21 1111111111123456799999999
Q ss_pred HHHCCCeEEEEEe--cCeEEEEEEec
Q 018740 324 CRACGLVDFKCTR--NRGFVMFTATK 347 (351)
Q Consensus 324 l~~aGf~~v~~~~--~g~~~~~~a~k 347 (351)
++++||++++... .+...++.++|
T Consensus 343 l~~aGf~~~~~~~~~~~~~svie~~~ 368 (369)
T 3gwz_A 343 LEKSGLRVERSLPCGAGPVRIVEIRR 368 (369)
T ss_dssp HHTTTEEEEEEEECSSSSEEEEEEEE
T ss_pred HHHCCCeEEEEEECCCCCcEEEEEEe
Confidence 9999999999776 45566666654
No 51
>4fsd_A Arsenic methyltransferase; rossmann fold; 1.75A {Cyanidioschyzon SP} PDB: 4fr0_A* 4fs8_A 3p7e_A 3qnh_A 3qhu_A
Probab=99.83 E-value=1.2e-19 Score=172.10 Aligned_cols=157 Identities=20% Similarity=0.218 Sum_probs=124.1
Q ss_pred CCCCCeEEEEcCccCHHHHHHHHhC-CCCeEEEEeCCHHHHHHHHHHHhhhC----C-CCCCCeEEEEecCCCC------
Q 018740 175 PVLGGNIIDASCGSGLFSRIFAKSG-LFSLVVALDYSENMLKQCYEFVQQES----N-FPKENFLLVRADISRL------ 242 (351)
Q Consensus 175 ~~~~~~vLDiGcG~G~~~~~l~~~~-~~~~v~gvD~s~~~~~~a~~~~~~~~----g-~~~~~i~~~~~d~~~l------ 242 (351)
..++.+|||||||+|.++..+++.. +..+|+|+|+|+.+++.|++++.... | ...+++.++++|+.++
T Consensus 81 ~~~~~~VLDlGcG~G~~~~~la~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~g~~~~~~v~~~~~d~~~l~~~~~~ 160 (383)
T 4fsd_A 81 SLEGATVLDLGCGTGRDVYLASKLVGEHGKVIGVDMLDNQLEVARKYVEYHAEKFFGSPSRSNVRFLKGFIENLATAEPE 160 (383)
T ss_dssp GGTTCEEEEESCTTSHHHHHHHHHHTTTCEEEEEECCHHHHHHHHHTHHHHHHHHHSSTTCCCEEEEESCTTCGGGCBSC
T ss_pred CCCCCEEEEecCccCHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHhhhhcccccCCCceEEEEccHHHhhhcccC
Confidence 3467899999999999999998873 56799999999999999999765320 1 1237899999999987
Q ss_pred CCCCCceeeEEeccccccCCChHHHHHHHHhcccCCcEEEEEeeccCCCCCcchHHHHHHHHHhhccCCccCCCHHHHHH
Q 018740 243 PFASSSIDAVHAGAAIHCWSSPSTGVAEISRVLRPGGVFVGTTYIVDGPFNLIPFSRLLRQNMMQISGSYTFLSEREIED 322 (351)
Q Consensus 243 p~~~~~fD~V~~~~vl~h~~d~~~~l~~i~~~LkpgG~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~~ 322 (351)
++++++||+|+++.+++|++|+..+|++++++|||||++++.++..+... ..........+ .......++.+++.+
T Consensus 161 ~~~~~~fD~V~~~~~l~~~~d~~~~l~~~~r~LkpgG~l~i~~~~~~~~~--~~~~~~~~~~~--~~~~~~~~~~~~~~~ 236 (383)
T 4fsd_A 161 GVPDSSVDIVISNCVCNLSTNKLALFKEIHRVLRDGGELYFSDVYADRRL--SEAAQQDPILY--GECLGGALYLEDFRR 236 (383)
T ss_dssp CCCTTCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEEEEESSCC--CHHHHHCHHHH--HTTCTTCCBHHHHHH
T ss_pred CCCCCCEEEEEEccchhcCCCHHHHHHHHHHHcCCCCEEEEEEecccccc--CHhHhhhHHHh--hcccccCCCHHHHHH
Confidence 88899999999999999999999999999999999999999988765321 11111111111 112335678999999
Q ss_pred HHHHCCCeEEEEE
Q 018740 323 LCRACGLVDFKCT 335 (351)
Q Consensus 323 ll~~aGf~~v~~~ 335 (351)
+|+++||.+++..
T Consensus 237 ll~~aGF~~v~~~ 249 (383)
T 4fsd_A 237 LVAEAGFRDVRLV 249 (383)
T ss_dssp HHHHTTCCCEEEE
T ss_pred HHHHCCCceEEEE
Confidence 9999999877644
No 52
>1vlm_A SAM-dependent methyltransferase; possible histamine methyltransferase, structural genomics, JCSG, protein struc initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.66.1.41
Probab=99.83 E-value=2.6e-19 Score=156.62 Aligned_cols=137 Identities=21% Similarity=0.333 Sum_probs=112.3
Q ss_pred CCeEEEEcCccCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHhhhCCCCCCCeEEEEecCCCCCCCCCceeeEEeccc
Q 018740 178 GGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLPFASSSIDAVHAGAA 257 (351)
Q Consensus 178 ~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~g~~~~~i~~~~~d~~~lp~~~~~fD~V~~~~v 257 (351)
+.+|||+|||+|.++..+++. +|+|+|+.+++.++++ ++.++.+|+..+++++++||+|++..+
T Consensus 48 ~~~vLDiG~G~G~~~~~l~~~------~~vD~s~~~~~~a~~~----------~~~~~~~d~~~~~~~~~~fD~v~~~~~ 111 (219)
T 1vlm_A 48 EGRGVEIGVGTGRFAVPLKIK------IGVEPSERMAEIARKR----------GVFVLKGTAENLPLKDESFDFALMVTT 111 (219)
T ss_dssp SSCEEEETCTTSTTHHHHTCC------EEEESCHHHHHHHHHT----------TCEEEECBTTBCCSCTTCEEEEEEESC
T ss_pred CCcEEEeCCCCCHHHHHHHHH------hccCCCHHHHHHHHhc----------CCEEEEcccccCCCCCCCeeEEEEcch
Confidence 679999999999999887653 9999999999999873 678999999999988889999999999
Q ss_pred cccCCChHHHHHHHHhcccCCcEEEEEeeccCCCCCcchHHHHHHHHH--hhccCCccCCCHHHHHHHHHHCCCeEEEEE
Q 018740 258 IHCWSSPSTGVAEISRVLRPGGVFVGTTYIVDGPFNLIPFSRLLRQNM--MQISGSYTFLSEREIEDLCRACGLVDFKCT 335 (351)
Q Consensus 258 l~h~~d~~~~l~~i~~~LkpgG~li~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~s~~~l~~ll~~aGf~~v~~~ 335 (351)
++|++++..+|+++.++|+|||.+++.++..+. .+........ .....+..+++.+++.++|+++||++++..
T Consensus 112 l~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~Gf~~~~~~ 186 (219)
T 1vlm_A 112 ICFVDDPERALKEAYRILKKGGYLIVGIVDRES-----FLGREYEKNKEKSVFYKNARFFSTEELMDLMRKAGFEEFKVV 186 (219)
T ss_dssp GGGSSCHHHHHHHHHHHEEEEEEEEEEEECSSS-----HHHHHHHHTTTC-CCSTTCCCCCHHHHHHHHHHTTCEEEEEE
T ss_pred HhhccCHHHHHHHHHHHcCCCcEEEEEEeCCcc-----HHHHHHHHHhcCcchhcccccCCHHHHHHHHHHCCCeEEEEe
Confidence 999999999999999999999999999887532 1111111110 112235677899999999999999988744
No 53
>2ex4_A Adrenal gland protein AD-003; methyltransferase, structural genomics, SGC, structural genomics consortium; HET: SAH; 1.75A {Homo sapiens} SCOP: c.66.1.42
Probab=99.83 E-value=5.2e-20 Score=163.38 Aligned_cols=144 Identities=16% Similarity=0.155 Sum_probs=118.9
Q ss_pred CCCeEEEEcCccCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHhhhCCCCCCCeEEEEecCCCCCCCCCceeeEEecc
Q 018740 177 LGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLPFASSSIDAVHAGA 256 (351)
Q Consensus 177 ~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~g~~~~~i~~~~~d~~~lp~~~~~fD~V~~~~ 256 (351)
++.+|||||||+|.++..+++.+ ..+|+|+|+|+.+++.+++++... + ..++.++.+|+..+++++++||+|++..
T Consensus 79 ~~~~vLDiGcG~G~~~~~l~~~~-~~~v~~vD~s~~~~~~a~~~~~~~-~--~~~~~~~~~d~~~~~~~~~~fD~v~~~~ 154 (241)
T 2ex4_A 79 GTSCALDCGAGIGRITKRLLLPL-FREVDMVDITEDFLVQAKTYLGEE-G--KRVRNYFCCGLQDFTPEPDSYDVIWIQW 154 (241)
T ss_dssp CCSEEEEETCTTTHHHHHTTTTT-CSEEEEEESCHHHHHHHHHHTGGG-G--GGEEEEEECCGGGCCCCSSCEEEEEEES
T ss_pred CCCEEEEECCCCCHHHHHHHHhc-CCEEEEEeCCHHHHHHHHHHhhhc-C--CceEEEEEcChhhcCCCCCCEEEEEEcc
Confidence 57899999999999999998876 459999999999999999987654 1 3468999999999988888999999999
Q ss_pred ccccCCChH--HHHHHHHhcccCCcEEEEEeeccCCCCCcchHHHHHHHHHhhccCCccCCCHHHHHHHHHHCCCeEEEE
Q 018740 257 AIHCWSSPS--TGVAEISRVLRPGGVFVGTTYIVDGPFNLIPFSRLLRQNMMQISGSYTFLSEREIEDLCRACGLVDFKC 334 (351)
Q Consensus 257 vl~h~~d~~--~~l~~i~~~LkpgG~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~~ll~~aGf~~v~~ 334 (351)
+++|++++. .+++++.++|+|||++++.++..... .. + ....+...++.+++.++++++||++++.
T Consensus 155 ~l~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~----~~-------~-~~~~~~~~~~~~~~~~~l~~aGf~~~~~ 222 (241)
T 2ex4_A 155 VIGHLTDQHLAEFLRRCKGSLRPNGIIVIKDNMAQEG----VI-------L-DDVDSSVCRDLDVVRRIICSAGLSLLAE 222 (241)
T ss_dssp CGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEEBSSS----EE-------E-ETTTTEEEEBHHHHHHHHHHTTCCEEEE
T ss_pred hhhhCCHHHHHHHHHHHHHhcCCCeEEEEEEccCCCc----ce-------e-cccCCcccCCHHHHHHHHHHcCCeEEEe
Confidence 999999865 89999999999999999998875430 00 0 0111233458999999999999999886
Q ss_pred Ee
Q 018740 335 TR 336 (351)
Q Consensus 335 ~~ 336 (351)
..
T Consensus 223 ~~ 224 (241)
T 2ex4_A 223 ER 224 (241)
T ss_dssp EE
T ss_pred ee
Confidence 53
No 54
>3i53_A O-methyltransferase; CO-complex, rossmann-like fold; HET: SAH; 2.08A {Streptomyces carzinostaticus subsp} PDB: 3i58_A* 3i5u_A* 3i64_A*
Probab=99.82 E-value=4.7e-19 Score=164.85 Aligned_cols=167 Identities=14% Similarity=0.057 Sum_probs=127.9
Q ss_pred hccCCCCCCeEEEEcCccCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHhhhCCCCCCCeEEEEecCCCCCCCCCcee
Q 018740 171 GYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLPFASSSID 250 (351)
Q Consensus 171 ~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~g~~~~~i~~~~~d~~~lp~~~~~fD 250 (351)
..+...+..+|||||||+|.++..+++..+..+++++|+ +.+++.+++++... +. ..+++++.+|+. .+++. +||
T Consensus 163 ~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~-~~-~~~v~~~~~d~~-~~~p~-~~D 237 (332)
T 3i53_A 163 AKYDWAALGHVVDVGGGSGGLLSALLTAHEDLSGTVLDL-QGPASAAHRRFLDT-GL-SGRAQVVVGSFF-DPLPA-GAG 237 (332)
T ss_dssp GSSCCGGGSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHHHHHHHHHHT-TC-TTTEEEEECCTT-SCCCC-SCS
T ss_pred HhCCCCCCCEEEEeCCChhHHHHHHHHHCCCCeEEEecC-HHHHHHHHHhhhhc-Cc-CcCeEEecCCCC-CCCCC-CCc
Confidence 334444567999999999999999999988889999999 99999999988765 21 378999999997 34444 799
Q ss_pred eEEeccccccCCCh--HHHHHHHHhcccCCcEEEEEeeccCCCCCcchHHHHHHHHHhhccCCccCCCHHHHHHHHHHCC
Q 018740 251 AVHAGAAIHCWSSP--STGVAEISRVLRPGGVFVGTTYIVDGPFNLIPFSRLLRQNMMQISGSYTFLSEREIEDLCRACG 328 (351)
Q Consensus 251 ~V~~~~vl~h~~d~--~~~l~~i~~~LkpgG~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~~ll~~aG 328 (351)
+|++.+++||++++ ..+|++++++|+|||++++.++..+.. ....... +..... .....++.+++.++++++|
T Consensus 238 ~v~~~~vlh~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~-~~~~~~d-~~~~~~---~~~~~~t~~e~~~ll~~aG 312 (332)
T 3i53_A 238 GYVLSAVLHDWDDLSAVAILRRCAEAAGSGGVVLVIEAVAGDE-HAGTGMD-LRMLTY---FGGKERSLAELGELAAQAG 312 (332)
T ss_dssp EEEEESCGGGSCHHHHHHHHHHHHHHHTTTCEEEEEECCCC----CCHHHH-HHHHHH---HSCCCCCHHHHHHHHHHTT
T ss_pred EEEEehhhccCCHHHHHHHHHHHHHhcCCCCEEEEEeecCCCC-CccHHHH-HHHHhh---CCCCCCCHHHHHHHHHHCC
Confidence 99999999999987 689999999999999999988876533 1111111 111111 1445679999999999999
Q ss_pred CeEEEEEecCeEEEEEEec
Q 018740 329 LVDFKCTRNRGFVMFTATK 347 (351)
Q Consensus 329 f~~v~~~~~g~~~~~~a~k 347 (351)
|++++....+...++.+++
T Consensus 313 f~~~~~~~~~~~~vie~r~ 331 (332)
T 3i53_A 313 LAVRAAHPISYVSIVEMTA 331 (332)
T ss_dssp EEEEEEEECSSSEEEEEEE
T ss_pred CEEEEEEECCCcEEEEEee
Confidence 9999977655455555543
No 55
>3bkx_A SAM-dependent methyltransferase; YP_807781.1, cyclopropane-fatty-acyl-phospholipid synthase-L protein, methyltransferase domain; 1.85A {Lactobacillus casei}
Probab=99.82 E-value=2.5e-19 Score=161.85 Aligned_cols=167 Identities=12% Similarity=0.130 Sum_probs=127.4
Q ss_pred HHHHhccCCCCCCeEEEEcCccCHHHHHHHHh-CCCCeEEEEeCCHH------HHHHHHHHHhhhCCCCCCCeEEEEec-
Q 018740 167 ELMKGYLKPVLGGNIIDASCGSGLFSRIFAKS-GLFSLVVALDYSEN------MLKQCYEFVQQESNFPKENFLLVRAD- 238 (351)
Q Consensus 167 ~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~-~~~~~v~gvD~s~~------~~~~a~~~~~~~~g~~~~~i~~~~~d- 238 (351)
..+...+...++.+|||||||+|.++..+++. ++..+|+|+|+|+. +++.+++++... +. ..++.++.+|
T Consensus 33 ~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~g~~~~v~gvD~s~~~~~~~~~~~~a~~~~~~~-~~-~~~v~~~~~d~ 110 (275)
T 3bkx_A 33 LAIAEAWQVKPGEKILEIGCGQGDLSAVLADQVGSSGHVTGIDIASPDYGAPLTLGQAWNHLLAG-PL-GDRLTVHFNTN 110 (275)
T ss_dssp HHHHHHHTCCTTCEEEEESCTTSHHHHHHHHHHCTTCEEEEECSSCTTCCSSSCHHHHHHHHHTS-TT-GGGEEEECSCC
T ss_pred HHHHHHcCCCCCCEEEEeCCCCCHHHHHHHHHhCCCCEEEEEECCccccccHHHHHHHHHHHHhc-CC-CCceEEEECCh
Confidence 45556666777889999999999999999988 45579999999997 999999988765 11 2579999998
Q ss_pred --CCCCCCCCCceeeEEeccccccCCChHHHHHHHHhcccCCcEEEEEeeccCCCCCcc--hHHHHHHHH-Hh---h--c
Q 018740 239 --ISRLPFASSSIDAVHAGAAIHCWSSPSTGVAEISRVLRPGGVFVGTTYIVDGPFNLI--PFSRLLRQN-MM---Q--I 308 (351)
Q Consensus 239 --~~~lp~~~~~fD~V~~~~vl~h~~d~~~~l~~i~~~LkpgG~li~~~~~~~~~~~~~--~~~~~~~~~-~~---~--~ 308 (351)
...+|+++++||+|++..+++|++++..+++.+.++++|||.+++.++..+...... .....+... +. . .
T Consensus 111 ~~~~~~~~~~~~fD~v~~~~~l~~~~~~~~~~~~~~~l~~~gG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (275)
T 3bkx_A 111 LSDDLGPIADQHFDRVVLAHSLWYFASANALALLFKNMAAVCDHVDVAEWSMQPTALDQIGHLQAAMIQGLLYAIAPSDV 190 (275)
T ss_dssp TTTCCGGGTTCCCSEEEEESCGGGSSCHHHHHHHHHHHTTTCSEEEEEEECSSCSSGGGHHHHHHHHHHHHHHHHSCCTT
T ss_pred hhhccCCCCCCCEEEEEEccchhhCCCHHHHHHHHHHHhCCCCEEEEEEecCCCCchhhhhHHHHHHHHHHHhhcccccc
Confidence 456677789999999999999999999877777788888999999988765332111 111111111 10 0 1
Q ss_pred cCCccCCCHHHHHHHHHHCCCeEEEEE
Q 018740 309 SGSYTFLSEREIEDLCRACGLVDFKCT 335 (351)
Q Consensus 309 ~~~~~~~s~~~l~~ll~~aGf~~v~~~ 335 (351)
..+..+++.+++.++++++||++++..
T Consensus 191 ~~~~~~~s~~~l~~~l~~aGf~~~~~~ 217 (275)
T 3bkx_A 191 ANIRTLITPDTLAQIAHDNTWTYTAGT 217 (275)
T ss_dssp CSCCCCCCHHHHHHHHHHHTCEEEECC
T ss_pred ccccccCCHHHHHHHHHHCCCeeEEEE
Confidence 234568899999999999999998754
No 56
>2gs9_A Hypothetical protein TT1324; methyl transferase, structural genomics, NPPSFA, national PR protein structural and functional analyses; HET: SAH; 2.60A {Thermus thermophilus}
Probab=99.82 E-value=2.2e-19 Score=155.88 Aligned_cols=140 Identities=26% Similarity=0.334 Sum_probs=112.2
Q ss_pred HHHhccCCCCCCeEEEEcCccCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHhhhCCCCCCCeEEEEecCCCCCCCCC
Q 018740 168 LMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLPFASS 247 (351)
Q Consensus 168 ~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~g~~~~~i~~~~~d~~~lp~~~~ 247 (351)
.+...+. ++.+|||+|||+|.++..+ + ..+++|+|+|+.+++.++++ ..++.++.+|+.++|++++
T Consensus 29 ~l~~~~~--~~~~vLdiG~G~G~~~~~l---~-~~~v~~vD~s~~~~~~a~~~--------~~~~~~~~~d~~~~~~~~~ 94 (211)
T 2gs9_A 29 ALKGLLP--PGESLLEVGAGTGYWLRRL---P-YPQKVGVEPSEAMLAVGRRR--------APEATWVRAWGEALPFPGE 94 (211)
T ss_dssp HHHTTCC--CCSEEEEETCTTCHHHHHC---C-CSEEEEECCCHHHHHHHHHH--------CTTSEEECCCTTSCCSCSS
T ss_pred HHHHhcC--CCCeEEEECCCCCHhHHhC---C-CCeEEEEeCCHHHHHHHHHh--------CCCcEEEEcccccCCCCCC
Confidence 3444443 6789999999999999887 2 12899999999999999987 3578899999999998889
Q ss_pred ceeeEEeccccccCCChHHHHHHHHhcccCCcEEEEEeeccCCCCCcchHHHHHHHH-H--hhccCCccCCCHHHHHHHH
Q 018740 248 SIDAVHAGAAIHCWSSPSTGVAEISRVLRPGGVFVGTTYIVDGPFNLIPFSRLLRQN-M--MQISGSYTFLSEREIEDLC 324 (351)
Q Consensus 248 ~fD~V~~~~vl~h~~d~~~~l~~i~~~LkpgG~li~~~~~~~~~~~~~~~~~~~~~~-~--~~~~~~~~~~s~~~l~~ll 324 (351)
+||+|++..+++|++++..+++++.++|||||.+++.+++.+. .+....... . .....+.++++.+++.+++
T Consensus 95 ~fD~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~s~~~l~~~l 169 (211)
T 2gs9_A 95 SFDVVLLFTTLEFVEDVERVLLEARRVLRPGGALVVGVLEALS-----PWAALYRRLGEKGVLPWAQARFLAREDLKALL 169 (211)
T ss_dssp CEEEEEEESCTTTCSCHHHHHHHHHHHEEEEEEEEEEEECTTS-----HHHHHHHHHHHTTCTTGGGCCCCCHHHHHHHH
T ss_pred cEEEEEEcChhhhcCCHHHHHHHHHHHcCCCCEEEEEecCCcC-----cHHHHHHHHhhccCccccccccCCHHHHHHHh
Confidence 9999999999999999999999999999999999999987642 121111111 0 1122356789999999999
Q ss_pred HHCC
Q 018740 325 RACG 328 (351)
Q Consensus 325 ~~aG 328 (351)
+ |
T Consensus 170 ~--G 171 (211)
T 2gs9_A 170 G--P 171 (211)
T ss_dssp C--S
T ss_pred c--C
Confidence 9 7
No 57
>2a14_A Indolethylamine N-methyltransferase; SGC,INMT, structural genomics, structural genomics consortium; HET: SAH; 1.70A {Homo sapiens} SCOP: c.66.1.15
Probab=99.82 E-value=2.6e-20 Score=167.78 Aligned_cols=164 Identities=16% Similarity=0.262 Sum_probs=118.5
Q ss_pred CCCCCCeEEEEcCccCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHhhhCCCC-------------------------
Q 018740 174 KPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFP------------------------- 228 (351)
Q Consensus 174 ~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~g~~------------------------- 228 (351)
...++.+|||||||+|.++..++..+. .+|+|+|+|+.|++.|++++....+..
T Consensus 52 ~~~~g~~vLDiGCG~G~~~~~~~~~~~-~~v~g~D~s~~~l~~a~~~~~~~~~~~d~s~~~~~~~~~~~~~~~~~~~~~~ 130 (263)
T 2a14_A 52 GGLQGDTLIDIGSGPTIYQVLAACDSF-QDITLSDFTDRNREELEKWLKKEPGAYDWTPAVKFACELEGNSGRWEEKEEK 130 (263)
T ss_dssp TSCCEEEEEESSCTTCCGGGTTGGGTE-EEEEEEESCHHHHHHHHHHHHTCTTCCCCHHHHHHHHHHTTCGGGHHHHHHH
T ss_pred CCCCCceEEEeCCCccHHHHHHHHhhh-cceeeccccHHHHHHHHHHHhcCCCcccchHHHHHHHhcCCCCcchhhHHHH
Confidence 345678999999999988777666653 379999999999999998765431000
Q ss_pred -CCCeE-EEEecCCCC-CC---CCCceeeEEeccccccC-C---ChHHHHHHHHhcccCCcEEEEEeeccCCCCCcchHH
Q 018740 229 -KENFL-LVRADISRL-PF---ASSSIDAVHAGAAIHCW-S---SPSTGVAEISRVLRPGGVFVGTTYIVDGPFNLIPFS 298 (351)
Q Consensus 229 -~~~i~-~~~~d~~~l-p~---~~~~fD~V~~~~vl~h~-~---d~~~~l~~i~~~LkpgG~li~~~~~~~~~~~~~~~~ 298 (351)
..++. ++++|+.+. |+ ..++||+|+++.+|||+ + +...++++++++|||||.|++.+...+... .
T Consensus 131 ~~~~i~~~~~~D~~~~~~~~~~~~~~fD~V~~~~~l~~i~~~~~~~~~~l~~i~r~LKPGG~li~~~~~~~~~~--~--- 205 (263)
T 2a14_A 131 LRAAVKRVLKCDVHLGNPLAPAVLPLADCVLTLLAMECACCSLDAYRAALCNLASLLKPGGHLVTTVTLRLPSY--M--- 205 (263)
T ss_dssp HHHHEEEEEECCTTSSSTTTTCCCCCEEEEEEESCHHHHCSSHHHHHHHHHHHHTTEEEEEEEEEEEESSCCEE--E---
T ss_pred HHhhhheEEeccccCCCCCCccccCCCCEeeehHHHHHhcCCHHHHHHHHHHHHHHcCCCcEEEEEEeecCccc--e---
Confidence 01243 889999873 43 25789999999999996 3 446899999999999999999876533210 0
Q ss_pred HHHHHHHhhccCCccCCCHHHHHHHHHHCCCeEEEEEec-----------CeEEEEEEecCC
Q 018740 299 RLLRQNMMQISGSYTFLSEREIEDLCRACGLVDFKCTRN-----------RGFVMFTATKPS 349 (351)
Q Consensus 299 ~~~~~~~~~~~~~~~~~s~~~l~~ll~~aGf~~v~~~~~-----------g~~~~~~a~kp~ 349 (351)
..........++.+++.++|+++||++++.... ..+++++|+|+.
T Consensus 206 ------~g~~~~~~~~~~~~~l~~~l~~aGF~i~~~~~~~~~~~~~~~~~~~~~~~~a~K~~ 261 (263)
T 2a14_A 206 ------VGKREFSCVALEKGEVEQAVLDAGFDIEQLLHSPQSYSVTNAANNGVCCIVARKKP 261 (263)
T ss_dssp ------ETTEEEECCCCCHHHHHHHHHHTTEEEEEEEEECCCCCTTTCCCCCEEEEEEEECC
T ss_pred ------eCCeEeeccccCHHHHHHHHHHCCCEEEEEeecccccccccCCCCceEEEEEEecC
Confidence 000001223679999999999999998885542 256677888875
No 58
>2fk8_A Methoxy mycolic acid synthase 4; S-adenosylmethionine-dependent methyltransferase fold, trans; HET: SAM; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 2fk7_A* 3ha3_A* 3ha5_A* 3ha7_A*
Probab=99.82 E-value=2.5e-19 Score=165.54 Aligned_cols=164 Identities=12% Similarity=0.148 Sum_probs=126.2
Q ss_pred HHHHHhccCCCCCCeEEEEcCccCHHHHHHHHh-CCCCeEEEEeCCHHHHHHHHHHHhhhCCCCCCCeEEEEecCCCCCC
Q 018740 166 FELMKGYLKPVLGGNIIDASCGSGLFSRIFAKS-GLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLPF 244 (351)
Q Consensus 166 ~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~-~~~~~v~gvD~s~~~~~~a~~~~~~~~g~~~~~i~~~~~d~~~lp~ 244 (351)
.+.+...+...++.+|||||||+|.++..+++. +. +|+|+|+|+.+++.+++++... |. ..++.++.+|+.++|
T Consensus 79 ~~~~~~~~~~~~~~~vLDiGcG~G~~~~~la~~~~~--~v~gvD~s~~~~~~a~~~~~~~-~~-~~~v~~~~~d~~~~~- 153 (318)
T 2fk8_A 79 VDLNLDKLDLKPGMTLLDIGCGWGTTMRRAVERFDV--NVIGLTLSKNQHARCEQVLASI-DT-NRSRQVLLQGWEDFA- 153 (318)
T ss_dssp HHHHHTTSCCCTTCEEEEESCTTSHHHHHHHHHHCC--EEEEEESCHHHHHHHHHHHHTS-CC-SSCEEEEESCGGGCC-
T ss_pred HHHHHHhcCCCCcCEEEEEcccchHHHHHHHHHCCC--EEEEEECCHHHHHHHHHHHHhc-CC-CCceEEEECChHHCC-
Confidence 456667777777889999999999999999987 54 9999999999999999988765 21 356999999998875
Q ss_pred CCCceeeEEeccccccC--CChHHHHHHHHhcccCCcEEEEEeeccCCCCCc----chH---HHHHHHHHhh-ccCCccC
Q 018740 245 ASSSIDAVHAGAAIHCW--SSPSTGVAEISRVLRPGGVFVGTTYIVDGPFNL----IPF---SRLLRQNMMQ-ISGSYTF 314 (351)
Q Consensus 245 ~~~~fD~V~~~~vl~h~--~d~~~~l~~i~~~LkpgG~li~~~~~~~~~~~~----~~~---~~~~~~~~~~-~~~~~~~ 314 (351)
++||+|++..+++|+ +++..+++++.++|||||.+++.++........ .+. .......+.. ......+
T Consensus 154 --~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (318)
T 2fk8_A 154 --EPVDRIVSIEAFEHFGHENYDDFFKRCFNIMPADGRMTVQSSVSYHPYEMAARGKKLSFETARFIKFIVTEIFPGGRL 231 (318)
T ss_dssp --CCCSEEEEESCGGGTCGGGHHHHHHHHHHHSCTTCEEEEEEEECCCHHHHHTTCHHHHHHHHHHHHHHHHHTSTTCCC
T ss_pred --CCcCEEEEeChHHhcCHHHHHHHHHHHHHhcCCCcEEEEEEeccCCchhhhhccccccccccchhhHHHHhcCCCCcC
Confidence 789999999999999 578899999999999999999999886431100 000 0001111111 1123456
Q ss_pred CCHHHHHHHHHHCCCeEEEEEe
Q 018740 315 LSEREIEDLCRACGLVDFKCTR 336 (351)
Q Consensus 315 ~s~~~l~~ll~~aGf~~v~~~~ 336 (351)
++.+++.++++++||++++...
T Consensus 232 ~s~~~~~~~l~~aGf~~~~~~~ 253 (318)
T 2fk8_A 232 PSTEMMVEHGEKAGFTVPEPLS 253 (318)
T ss_dssp CCHHHHHHHHHHTTCBCCCCEE
T ss_pred CCHHHHHHHHHhCCCEEEEEEe
Confidence 7999999999999999887544
No 59
>3d2l_A SAM-dependent methyltransferase; ZP_00538691.1, structural G joint center for structural genomics, JCSG; HET: MSE; 1.90A {Exiguobacterium sibiricum 255-15}
Probab=99.82 E-value=3.4e-19 Score=157.82 Aligned_cols=174 Identities=17% Similarity=0.176 Sum_probs=128.1
Q ss_pred HHHHHHhccCCCCCCeEEEEcCccCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHhhhCCCCCCCeEEEEecCCCCCC
Q 018740 165 EFELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLPF 244 (351)
Q Consensus 165 ~~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~g~~~~~i~~~~~d~~~lp~ 244 (351)
..+.+...+.. +.+|||+|||+|.++..+++. . +++|+|+|+.+++.|++++... ..++.++.+|+.++++
T Consensus 23 ~~~~~~~~~~~--~~~vLdiG~G~G~~~~~l~~~-~--~v~~vD~s~~~~~~a~~~~~~~----~~~~~~~~~d~~~~~~ 93 (243)
T 3d2l_A 23 WVAWVLEQVEP--GKRIADIGCGTGTATLLLADH-Y--EVTGVDLSEEMLEIAQEKAMET----NRHVDFWVQDMRELEL 93 (243)
T ss_dssp HHHHHHHHSCT--TCEEEEESCTTCHHHHHHTTT-S--EEEEEESCHHHHHHHHHHHHHT----TCCCEEEECCGGGCCC
T ss_pred HHHHHHHHcCC--CCeEEEecCCCCHHHHHHhhC-C--eEEEEECCHHHHHHHHHhhhhc----CCceEEEEcChhhcCC
Confidence 34455666554 579999999999999999887 3 9999999999999999988766 4689999999998886
Q ss_pred CCCceeeEEecc-ccccCC---ChHHHHHHHHhcccCCcEEEEEeeccCCCCCc---ch-----------HHHHH---HH
Q 018740 245 ASSSIDAVHAGA-AIHCWS---SPSTGVAEISRVLRPGGVFVGTTYIVDGPFNL---IP-----------FSRLL---RQ 303 (351)
Q Consensus 245 ~~~~fD~V~~~~-vl~h~~---d~~~~l~~i~~~LkpgG~li~~~~~~~~~~~~---~~-----------~~~~~---~~ 303 (351)
+ ++||+|++.. +++|+. ++..+++++.++|+|||.+++..+........ .. |.... ..
T Consensus 94 ~-~~fD~v~~~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (243)
T 3d2l_A 94 P-EPVDAITILCDSLNYLQTEADVKQTFDSAARLLTDGGKLLFDVHSPYKMETLFNGKTYATHAEQSSYIWFADPGEEPL 172 (243)
T ss_dssp S-SCEEEEEECTTGGGGCCSHHHHHHHHHHHHHHEEEEEEEEEEEECHHHHHTTTSSEEEEEECSSEEEEEEEEECSSTT
T ss_pred C-CCcCEEEEeCCchhhcCCHHHHHHHHHHHHHhcCCCeEEEEEcCCHHHHHHhcCCcceeEECCCcEEEEEeecCcccc
Confidence 5 7899999986 999994 45688999999999999999977653210000 00 00000 00
Q ss_pred -------H--------Hhh--ccCCccCCCHHHHHHHHHHCCCeEEEEEec---------CeEEEEEEecC
Q 018740 304 -------N--------MMQ--ISGSYTFLSEREIEDLCRACGLVDFKCTRN---------RGFVMFTATKP 348 (351)
Q Consensus 304 -------~--------~~~--~~~~~~~~s~~~l~~ll~~aGf~~v~~~~~---------g~~~~~~a~kp 348 (351)
. +.. ...+.++++.+++.++|+++||++++.... ....+++++||
T Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~aGf~~~~~~~~~~~~~~~~~~~~~~~va~K~ 243 (243)
T 3d2l_A 173 SVVHELTFFIEGEDGRYDRVDETHHQRTYPPEQYITWLREAGFRVCAVTGDFKSDAPTETAERIFFVAEKI 243 (243)
T ss_dssp EEEEEEEEEEECTTSCEEEEEEEEEEECCCHHHHHHHHHHTTEEEEEEEETTSSSCCCTTCSEEEEEEEEC
T ss_pred EEEEEEEEEEEcCCCceEEEEEEEeEecCCHHHHHHHHHHCCCeEEEEecCcccCCCCCCceEEEEEEEeC
Confidence 0 000 011335789999999999999999886532 34577788886
No 60
>3thr_A Glycine N-methyltransferase; GNMT, folate, methyltransferase binding, liver cytosol, transferase-transferase inhibitor C; HET: C2F TAM; 2.00A {Rattus norvegicus} SCOP: c.66.1.5 PDB: 3ths_A* 1xva_A* 1d2c_A 1kia_A* 1nbh_A* 1bhj_A* 2idj_A 2idk_A* 1d2g_A 1d2h_A* 1nbi_A* 1r8x_A 1r8y_A 1r74_A* 2azt_A*
Probab=99.82 E-value=3e-19 Score=162.93 Aligned_cols=124 Identities=21% Similarity=0.294 Sum_probs=104.0
Q ss_pred HHHHHHHHhccCCCCCCeEEEEcCccCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHhhhC-CCCCCCeEEEEecCCC
Q 018740 163 EKEFELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQES-NFPKENFLLVRADISR 241 (351)
Q Consensus 163 ~~~~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~-g~~~~~i~~~~~d~~~ 241 (351)
....+.+...+...++.+|||||||+|.++..+++.+. +|+|+|+|+.|++.|+++..... .....++.+..+|+..
T Consensus 43 ~~~~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~--~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~d~~~ 120 (293)
T 3thr_A 43 AEYKAWLLGLLRQHGCHRVLDVACGTGVDSIMLVEEGF--SVTSVDASDKMLKYALKERWNRRKEPAFDKWVIEEANWLT 120 (293)
T ss_dssp HHHHHHHHHHHHHTTCCEEEETTCTTSHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHHHTTTSHHHHTCEEEECCGGG
T ss_pred HHHHHHHHHHhcccCCCEEEEecCCCCHHHHHHHHCCC--eEEEEECCHHHHHHHHHhhhhcccccccceeeEeecChhh
Confidence 44445666666555678999999999999999999976 99999999999999998764320 0012578899999988
Q ss_pred CC---CCCCceeeEEec-cccccCCC-------hHHHHHHHHhcccCCcEEEEEeecc
Q 018740 242 LP---FASSSIDAVHAG-AAIHCWSS-------PSTGVAEISRVLRPGGVFVGTTYIV 288 (351)
Q Consensus 242 lp---~~~~~fD~V~~~-~vl~h~~d-------~~~~l~~i~~~LkpgG~li~~~~~~ 288 (351)
++ +++++||+|++. .+++|+++ +..++++++++|||||++++..++.
T Consensus 121 ~~~~~~~~~~fD~V~~~g~~l~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 178 (293)
T 3thr_A 121 LDKDVPAGDGFDAVICLGNSFAHLPDSKGDQSEHRLALKNIASMVRPGGLLVIDHRNY 178 (293)
T ss_dssp HHHHSCCTTCEEEEEECTTCGGGSCCSSSSSHHHHHHHHHHHHTEEEEEEEEEEEECH
T ss_pred CccccccCCCeEEEEEcChHHhhcCccccCHHHHHHHHHHHHHHcCCCeEEEEEeCCH
Confidence 87 788999999998 89999999 8999999999999999999998764
No 61
>2gb4_A Thiopurine S-methyltransferase; 18204406, thiopurine methyltransferase, structural genomics, PSI, protein structure initiative; HET: SAH; 1.25A {Mus musculus} PDB: 3bgi_A* 3bgd_A* 2bzg_A* 2h11_A*
Probab=99.82 E-value=3.7e-19 Score=159.06 Aligned_cols=151 Identities=17% Similarity=0.181 Sum_probs=114.9
Q ss_pred HHHHhccCCCCCCeEEEEcCccCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHhh---------hCC-----CCCCCe
Q 018740 167 ELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQ---------ESN-----FPKENF 232 (351)
Q Consensus 167 ~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~---------~~g-----~~~~~i 232 (351)
+.+...+...++.+|||+|||+|..+..|++.|. +|+|+|+|+.|++.|+++... ..+ ....++
T Consensus 58 ~~~~~~~~~~~~~~vLD~GCG~G~~~~~La~~G~--~V~gvD~S~~~i~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 135 (252)
T 2gb4_A 58 KHLDTFLKGQSGLRVFFPLCGKAIEMKWFADRGH--TVVGVEISEIGIREFFAEQNLSYTEEPLAEIAGAKVFKSSSGSI 135 (252)
T ss_dssp HHHHHHHTTCCSCEEEETTCTTCTHHHHHHHTTC--EEEEECSCHHHHHHHHHHTTCCEEEEECTTSTTCEEEEETTSSE
T ss_pred HHHHHhccCCCCCeEEEeCCCCcHHHHHHHHCCC--eEEEEECCHHHHHHHHHhcccccccccccccccccccccCCCce
Confidence 3443333334578999999999999999999987 999999999999999876531 000 013689
Q ss_pred EEEEecCCCCCCCC-CceeeEEeccccccCCCh--HHHHHHHHhcccCCcEEEEEeeccCCCCCcchHHHHHHHHHhhcc
Q 018740 233 LLVRADISRLPFAS-SSIDAVHAGAAIHCWSSP--STGVAEISRVLRPGGVFVGTTYIVDGPFNLIPFSRLLRQNMMQIS 309 (351)
Q Consensus 233 ~~~~~d~~~lp~~~-~~fD~V~~~~vl~h~~d~--~~~l~~i~~~LkpgG~li~~~~~~~~~~~~~~~~~~~~~~~~~~~ 309 (351)
.++++|+.++++.+ ++||+|++..+++|++.+ ..+++++.++|||||++++.+...+.. ...
T Consensus 136 ~~~~~D~~~l~~~~~~~FD~V~~~~~l~~l~~~~~~~~l~~~~~~LkpGG~l~l~~~~~~~~---------------~~~ 200 (252)
T 2gb4_A 136 SLYCCSIFDLPRANIGKFDRIWDRGALVAINPGDHDRYADIILSLLRKEFQYLVAVLSYDPT---------------KHA 200 (252)
T ss_dssp EEEESCTTTGGGGCCCCEEEEEESSSTTTSCGGGHHHHHHHHHHTEEEEEEEEEEEEECCTT---------------SCC
T ss_pred EEEECccccCCcccCCCEEEEEEhhhhhhCCHHHHHHHHHHHHHHcCCCeEEEEEEEecCCc---------------cCC
Confidence 99999999998764 899999999999999743 578999999999999998766553211 001
Q ss_pred CCccCCCHHHHHHHHHHCCCeEEEEE
Q 018740 310 GSYTFLSEREIEDLCRACGLVDFKCT 335 (351)
Q Consensus 310 ~~~~~~s~~~l~~ll~~aGf~~v~~~ 335 (351)
+....++.+++.++++. +|+++...
T Consensus 201 g~~~~~~~~el~~~l~~-~f~v~~~~ 225 (252)
T 2gb4_A 201 GPPFYVPSAELKRLFGT-KCSMQCLE 225 (252)
T ss_dssp CSSCCCCHHHHHHHHTT-TEEEEEEE
T ss_pred CCCCCCCHHHHHHHhhC-CeEEEEEe
Confidence 12234789999999988 59877643
No 62
>1ve3_A Hypothetical protein PH0226; dimer, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function, NPPSFA; HET: SAM; 2.10A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=99.82 E-value=5.8e-19 Score=154.68 Aligned_cols=166 Identities=19% Similarity=0.262 Sum_probs=122.3
Q ss_pred HHHHHhccCCCCCCeEEEEcCccCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHhhhCCCCCCCeEEEEecCCCCCCC
Q 018740 166 FELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLPFA 245 (351)
Q Consensus 166 ~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~g~~~~~i~~~~~d~~~lp~~ 245 (351)
.+.+...+.. +.+|||+|||+|.++..+++.++ +++|+|+|+.+++.+++++... ..++.++++|+.+++++
T Consensus 29 ~~~l~~~~~~--~~~vLDlG~G~G~~~~~l~~~~~--~v~~vD~s~~~~~~a~~~~~~~----~~~~~~~~~d~~~~~~~ 100 (227)
T 1ve3_A 29 EPLLMKYMKK--RGKVLDLACGVGGFSFLLEDYGF--EVVGVDISEDMIRKAREYAKSR----ESNVEFIVGDARKLSFE 100 (227)
T ss_dssp HHHHHHSCCS--CCEEEEETCTTSHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHHHT----TCCCEEEECCTTSCCSC
T ss_pred HHHHHHhcCC--CCeEEEEeccCCHHHHHHHHcCC--EEEEEECCHHHHHHHHHHHHhc----CCCceEEECchhcCCCC
Confidence 4455555554 77999999999999999999987 9999999999999999988776 47899999999998888
Q ss_pred CCceeeEEeccc--cccCCChHHHHHHHHhcccCCcEEEEEeeccCCCCCc-chHHHHHHHHHhh---------------
Q 018740 246 SSSIDAVHAGAA--IHCWSSPSTGVAEISRVLRPGGVFVGTTYIVDGPFNL-IPFSRLLRQNMMQ--------------- 307 (351)
Q Consensus 246 ~~~fD~V~~~~v--l~h~~d~~~~l~~i~~~LkpgG~li~~~~~~~~~~~~-~~~~~~~~~~~~~--------------- 307 (351)
+++||+|++..+ ++|..++..+++++.++|+|||.+++.+++....... ..........+..
T Consensus 101 ~~~~D~v~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (227)
T 1ve3_A 101 DKTFDYVIFIDSIVHFEPLELNQVFKEVRRVLKPSGKFIMYFTDLRELLPRLKESLVVGQKYWISKVIPDQEERTVVIEF 180 (227)
T ss_dssp TTCEEEEEEESCGGGCCHHHHHHHHHHHHHHEEEEEEEEEEEECHHHHGGGCCC---------CCEEEEETTTTEEEEEC
T ss_pred CCcEEEEEEcCchHhCCHHHHHHHHHHHHHHcCCCcEEEEEecChHHHHHHHHhhhhcccceeecccccCccccEEEEEe
Confidence 889999999999 5555677899999999999999999988763211000 0000000000000
Q ss_pred ------ccCCccCCCHHHHHHHHHHCCCeEEEEEecCeE
Q 018740 308 ------ISGSYTFLSEREIEDLCRACGLVDFKCTRNRGF 340 (351)
Q Consensus 308 ------~~~~~~~~s~~~l~~ll~~aGf~~v~~~~~g~~ 340 (351)
...+...|.. ++.++|+++||..++....+.+
T Consensus 181 ~~~~~~~~~~~~~w~~-~~~~~l~~~GF~~v~~~~~~~~ 218 (227)
T 1ve3_A 181 KSEQDSFRVRFNVWGK-TGVELLAKLYFTKEAEEKVGNY 218 (227)
T ss_dssp -----CCEEEEECCCH-HHHHHHHTTTEEEEEEEEETTT
T ss_pred ccchhhheeehhhhch-HHHHHHHHHhhhHHHHHHhCCc
Confidence 0001123334 7899999999999997766643
No 63
>3g5t_A Trans-aconitate 3-methyltransferase; structural genomics, protein structure initiative, PSI, center for eukaryotic structural genomics; HET: MSE SAH T8N; 1.12A {Saccharomyces cerevisiae}
Probab=99.82 E-value=5.4e-19 Score=161.96 Aligned_cols=165 Identities=16% Similarity=0.177 Sum_probs=122.2
Q ss_pred cHHHHHHHHhccCCCCCCeEEEEcCccCHHHHHHHHhC-CCCeEEEEeCCHHHHHHHHHHHhhhCCCCCCCeEEEEecCC
Q 018740 162 PEKEFELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSG-LFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADIS 240 (351)
Q Consensus 162 ~~~~~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~-~~~~v~gvD~s~~~~~~a~~~~~~~~g~~~~~i~~~~~d~~ 240 (351)
+....+.+..+.. .++.+|||||||+|.++..+++.. +..+|+|+|+|+.+++.|++++... +....++.++++|+.
T Consensus 22 ~~~~~~~l~~~~~-~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~-~~~~~~v~~~~~d~~ 99 (299)
T 3g5t_A 22 PSDFYKMIDEYHD-GERKLLVDVGCGPGTATLQMAQELKPFEQIIGSDLSATMIKTAEVIKEGS-PDTYKNVSFKISSSD 99 (299)
T ss_dssp CHHHHHHHHHHCC-SCCSEEEEETCTTTHHHHHHHHHSSCCSEEEEEESCHHHHHHHHHHHHHC-C-CCTTEEEEECCTT
T ss_pred CHHHHHHHHHHhc-CCCCEEEEECCCCCHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHhc-cCCCCceEEEEcCHH
Confidence 3555666666654 367899999999999999999764 5679999999999999999987763 112578999999999
Q ss_pred CCCCCC------CceeeEEeccccccCCChHHHHHHHHhcccCCcEEEEEeeccCCCCCcchHHHHHHHHHhhccCCccC
Q 018740 241 RLPFAS------SSIDAVHAGAAIHCWSSPSTGVAEISRVLRPGGVFVGTTYIVDGPFNLIPFSRLLRQNMMQISGSYTF 314 (351)
Q Consensus 241 ~lp~~~------~~fD~V~~~~vl~h~~d~~~~l~~i~~~LkpgG~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 314 (351)
++++.+ ++||+|++..++||+ ++..+++++.++|+|||.+++.++..............+............+
T Consensus 100 ~~~~~~~~~~~~~~fD~V~~~~~l~~~-~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (299)
T 3g5t_A 100 DFKFLGADSVDKQKIDMITAVECAHWF-DFEKFQRSAYANLRKDGTIAIWGYADPIFPDYPEFDDLMIEVPYGKQGLGPY 178 (299)
T ss_dssp CCGGGCTTTTTSSCEEEEEEESCGGGS-CHHHHHHHHHHHEEEEEEEEEEEEEEEECTTCGGGTTHHHHHHHCTTTTGGG
T ss_pred hCCccccccccCCCeeEEeHhhHHHHh-CHHHHHHHHHHhcCCCcEEEEEecCCccccCcHHHHHHHHHhccCcccccch
Confidence 998877 899999999999999 9999999999999999999995554321111111111122222111011122
Q ss_pred ---CCHHHHHHHHHHCCC
Q 018740 315 ---LSEREIEDLCRACGL 329 (351)
Q Consensus 315 ---~s~~~l~~ll~~aGf 329 (351)
...+.+.++++++||
T Consensus 179 w~~p~~~~~~~~l~~~gf 196 (299)
T 3g5t_A 179 WEQPGRSRLRNMLKDSHL 196 (299)
T ss_dssp SCTTHHHHHHTTTTTCCC
T ss_pred hhchhhHHHHHhhhccCC
Confidence 356678999999999
No 64
>3g2m_A PCZA361.24; SAM-dependent methyltransferase, glycopeptide antibiotics biosynthesis, structural genomics; 2.00A {Amycolatopsis orientalis} PDB: 3g2o_A* 3g2p_A* 3g2q_A*
Probab=99.82 E-value=4.2e-19 Score=162.67 Aligned_cols=176 Identities=18% Similarity=0.222 Sum_probs=126.5
Q ss_pred HHHHHHhccCCCCCCeEEEEcCccCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHhhhCCCCC----CCeEEEEecCC
Q 018740 165 EFELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPK----ENFLLVRADIS 240 (351)
Q Consensus 165 ~~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~g~~~----~~i~~~~~d~~ 240 (351)
....+...+... +.+|||||||+|.++..+++.+. +|+|+|+|+.+++.|++++... . .++.++++|+.
T Consensus 71 ~~~~~~~~~~~~-~~~vLDlGcG~G~~~~~l~~~~~--~v~gvD~s~~~~~~a~~~~~~~----~~~~~~~v~~~~~d~~ 143 (299)
T 3g2m_A 71 EAREFATRTGPV-SGPVLELAAGMGRLTFPFLDLGW--EVTALELSTSVLAAFRKRLAEA----PADVRDRCTLVQGDMS 143 (299)
T ss_dssp HHHHHHHHHCCC-CSCEEEETCTTTTTHHHHHTTTC--CEEEEESCHHHHHHHHHHHHTS----CHHHHTTEEEEECBTT
T ss_pred HHHHHHHhhCCC-CCcEEEEeccCCHHHHHHHHcCC--eEEEEECCHHHHHHHHHHHhhc----ccccccceEEEeCchh
Confidence 344555555543 34999999999999999999865 9999999999999999988765 3 68999999999
Q ss_pred CCCCCCCceeeEEec-cccccCCC--hHHHHHHHHhcccCCcEEEEEeeccCCCC----C-cchHHHHHHHHH-------
Q 018740 241 RLPFASSSIDAVHAG-AAIHCWSS--PSTGVAEISRVLRPGGVFVGTTYIVDGPF----N-LIPFSRLLRQNM------- 305 (351)
Q Consensus 241 ~lp~~~~~fD~V~~~-~vl~h~~d--~~~~l~~i~~~LkpgG~li~~~~~~~~~~----~-~~~~~~~~~~~~------- 305 (351)
++++ +++||+|++. .+++|++. ...+|+++.++|+|||++++.+++.+... . ...+.......+
T Consensus 144 ~~~~-~~~fD~v~~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 222 (299)
T 3g2m_A 144 AFAL-DKRFGTVVISSGSINELDEADRRGLYASVREHLEPGGKFLLSLAMSEAAESEPLERKQELPGRSGRRYVLHVRHL 222 (299)
T ss_dssp BCCC-SCCEEEEEECHHHHTTSCHHHHHHHHHHHHHHEEEEEEEEEEEECCHHHHSCCCCC-------------CCEEEE
T ss_pred cCCc-CCCcCEEEECCcccccCCHHHHHHHHHHHHHHcCCCcEEEEEeecCccccccchhccceeecCCCcEEEEEEEEe
Confidence 9987 6889999965 56676652 47999999999999999999998764210 0 000000000000
Q ss_pred --------------------hhccCCccCCCHHHHHHHHHHCCCeEEEEEecC-------eEEEEEEecC
Q 018740 306 --------------------MQISGSYTFLSEREIEDLCRACGLVDFKCTRNR-------GFVMFTATKP 348 (351)
Q Consensus 306 --------------------~~~~~~~~~~s~~~l~~ll~~aGf~~v~~~~~g-------~~~~~~a~kp 348 (351)
.....+.++++.+++.++|+++||++++..... ...++.+.++
T Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~el~~ll~~aGF~v~~~~~~~~~g~~~~~~~lvea~~~ 292 (299)
T 3g2m_A 223 PAEEIQEITIHPADETTDPFVVCTHRRRLLAPDQVVRELVRSGFDVIAQTPFASGGAGRKDMVLVEAVMP 292 (299)
T ss_dssp EEEEEEEEEEEESCC--CCCCEEEEEEEEECHHHHHHHHHHTTCEEEEEEEECTTSSSSCCEEEEEEECC
T ss_pred ccccEEEEEEEeccCCCCcEEEEEEEEEEeCHHHHHHHHHHCCCEEEEEEecCCCCCCccceeeeehhhh
Confidence 001123447899999999999999999865432 2455555543
No 65
>3bxo_A N,N-dimethyltransferase; desosamine, sugar, carbohydrate, antibiotic, SAM, adoMet; HET: SAM UPP; 2.00A {Streptomyces venezuelae}
Probab=99.81 E-value=1.7e-19 Score=159.29 Aligned_cols=169 Identities=20% Similarity=0.246 Sum_probs=124.2
Q ss_pred HHHHhccCCCCCCeEEEEcCccCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHhhhCCCCCCCeEEEEecCCCCCCCC
Q 018740 167 ELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLPFAS 246 (351)
Q Consensus 167 ~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~g~~~~~i~~~~~d~~~lp~~~ 246 (351)
+.+...+ .++.+|||+|||+|.++..+++.++ +++|+|+|+.+++.++++ .+++.++.+|+.++++ +
T Consensus 32 ~~l~~~~--~~~~~vLdiG~G~G~~~~~l~~~~~--~v~~~D~s~~~~~~a~~~--------~~~~~~~~~d~~~~~~-~ 98 (239)
T 3bxo_A 32 DLVRSRT--PEASSLLDVACGTGTHLEHFTKEFG--DTAGLELSEDMLTHARKR--------LPDATLHQGDMRDFRL-G 98 (239)
T ss_dssp HHHHHHC--TTCCEEEEETCTTSHHHHHHHHHHS--EEEEEESCHHHHHHHHHH--------CTTCEEEECCTTTCCC-S
T ss_pred HHHHHhc--CCCCeEEEecccCCHHHHHHHHhCC--cEEEEeCCHHHHHHHHHh--------CCCCEEEECCHHHccc-C
Confidence 3444444 3577999999999999999999987 999999999999999986 4678999999999886 6
Q ss_pred CceeeEEe-ccccccCCCh---HHHHHHHHhcccCCcEEEEEeeccCCCCCcc---h-----------------------
Q 018740 247 SSIDAVHA-GAAIHCWSSP---STGVAEISRVLRPGGVFVGTTYIVDGPFNLI---P----------------------- 296 (351)
Q Consensus 247 ~~fD~V~~-~~vl~h~~d~---~~~l~~i~~~LkpgG~li~~~~~~~~~~~~~---~----------------------- 296 (351)
++||+|+| ..+++|++++ ..+|+++.++|+|||.+++.++......... .
T Consensus 99 ~~~D~v~~~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (239)
T 3bxo_A 99 RKFSAVVSMFSSVGYLKTTEELGAAVASFAEHLEPGGVVVVEPWWFPETFADGWVSADVVRRDGRTVARVSHSVREGNAT 178 (239)
T ss_dssp SCEEEEEECTTGGGGCCSHHHHHHHHHHHHHTEEEEEEEEECCCCCTTTCCTTCEEEEEEEETTEEEEEEEEEEEETTEE
T ss_pred CCCcEEEEcCchHhhcCCHHHHHHHHHHHHHhcCCCeEEEEEeccCcccccccceEeeEEecCCceEEEEEEEecCCCEE
Confidence 78999995 5599999654 5889999999999999999876543211000 0
Q ss_pred -----HH-HHHHHHHhh--ccCCccCCCHHHHHHHHHHCCCeEEEEEe-cCeEEEEEEecC
Q 018740 297 -----FS-RLLRQNMMQ--ISGSYTFLSEREIEDLCRACGLVDFKCTR-NRGFVMFTATKP 348 (351)
Q Consensus 297 -----~~-~~~~~~~~~--~~~~~~~~s~~~l~~ll~~aGf~~v~~~~-~g~~~~~~a~kp 348 (351)
+. ......... ...+.++++.+++.++|+++||+++.... .+...+++++||
T Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~ll~~aGF~v~~~~~~~~~~~~~va~K~ 239 (239)
T 3bxo_A 179 RMEVHFTVADPGKGVRHFSDVHLITLFHQAEYEAAFTAAGLRVEYLEGGPSGRGLFVGVPA 239 (239)
T ss_dssp EEEEEEEEEETTTEEEEEEEEEEEECCCHHHHHHHHHHTTEEEEEESSTTTSSCEEEEEEC
T ss_pred EEEEEEEEecCCCcceEEEEEEEeeecCHHHHHHHHHHCCCEEEEeEcCCCCceEEEEecC
Confidence 00 000000000 01134678999999999999997666543 345677888886
No 66
>1qzz_A RDMB, aclacinomycin-10-hydroxylase; anthracycline, methyltransferase, polyketide, tailoring enzymes, structural proteomics in E spine; HET: SAM; 2.10A {Streptomyces purpurascens} SCOP: a.4.5.29 c.66.1.12 PDB: 1r00_A* 1xds_A* 1xdu_A*
Probab=99.81 E-value=1.2e-18 Score=164.53 Aligned_cols=176 Identities=15% Similarity=0.117 Sum_probs=130.0
Q ss_pred HHHHhccCCCCCCeEEEEcCccCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHhhhCCCCCCCeEEEEecCCCCCCCC
Q 018740 167 ELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLPFAS 246 (351)
Q Consensus 167 ~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~g~~~~~i~~~~~d~~~lp~~~ 246 (351)
+.+.+.+...++.+|||||||+|.++..+++.++..+++++|+ +.+++.+++++... +. ..+++++.+|+.+ +++.
T Consensus 172 ~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~~~~~-~~-~~~v~~~~~d~~~-~~~~ 247 (374)
T 1qzz_A 172 EAPADAYDWSAVRHVLDVGGGNGGMLAAIALRAPHLRGTLVEL-AGPAERARRRFADA-GL-ADRVTVAEGDFFK-PLPV 247 (374)
T ss_dssp HHHHHTSCCTTCCEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHHHHHHHHHHT-TC-TTTEEEEECCTTS-CCSC
T ss_pred HHHHHhCCCCCCCEEEEECCCcCHHHHHHHHHCCCCEEEEEeC-HHHHHHHHHHHHhc-CC-CCceEEEeCCCCC-cCCC
Confidence 3455555666678999999999999999999988789999999 99999999988765 21 3489999999976 3333
Q ss_pred CceeeEEeccccccCCChH--HHHHHHHhcccCCcEEEEEee--ccCCCCCcchHHHHHHHHHhhccCCccCCCHHHHHH
Q 018740 247 SSIDAVHAGAAIHCWSSPS--TGVAEISRVLRPGGVFVGTTY--IVDGPFNLIPFSRLLRQNMMQISGSYTFLSEREIED 322 (351)
Q Consensus 247 ~~fD~V~~~~vl~h~~d~~--~~l~~i~~~LkpgG~li~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~~ 322 (351)
.||+|++.+++||++++. .+|++++++|+|||++++.++ ..... ..+..............+...++.+++.+
T Consensus 248 -~~D~v~~~~vl~~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 324 (374)
T 1qzz_A 248 -TADVVLLSFVLLNWSDEDALTILRGCVRALEPGGRLLVLDRADVEGDG--ADRFFSTLLDLRMLTFMGGRVRTRDEVVD 324 (374)
T ss_dssp -CEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEECCH---------HHHHHHHHHHHHHHHSCCCCCHHHHHH
T ss_pred -CCCEEEEeccccCCCHHHHHHHHHHHHHhcCCCcEEEEEechhhcCCC--CCcchhhhcchHHHHhCCCcCCCHHHHHH
Confidence 399999999999999885 899999999999999999887 43211 11111111111111111346789999999
Q ss_pred HHHHCCCeEEEEEecC-eE-----EEEEEecCC
Q 018740 323 LCRACGLVDFKCTRNR-GF-----VMFTATKPS 349 (351)
Q Consensus 323 ll~~aGf~~v~~~~~g-~~-----~~~~a~kp~ 349 (351)
+++++||++++....+ .. .++.++|++
T Consensus 325 ll~~aGf~~~~~~~~~~~~~~~~~~~i~~~~~~ 357 (374)
T 1qzz_A 325 LAGSAGLALASERTSGSTTLPFDFSILEFTAVS 357 (374)
T ss_dssp HHHTTTEEEEEEEEECCSSCSSCEEEEEEEECC
T ss_pred HHHHCCCceEEEEECCCCcccCCcEEEEEEECc
Confidence 9999999998865543 33 666777664
No 67
>2i62_A Nicotinamide N-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAH; 1.80A {Mus musculus} PDB: 2iip_A* 3rod_A*
Probab=99.81 E-value=1.4e-19 Score=162.43 Aligned_cols=165 Identities=15% Similarity=0.267 Sum_probs=124.0
Q ss_pred CCCCCCeEEEEcCccCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHhhhCCC--------------C-----------
Q 018740 174 KPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNF--------------P----------- 228 (351)
Q Consensus 174 ~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~g~--------------~----------- 228 (351)
...++.+|||+|||+|.++..+++.+. .+|+|+|+|+.+++.+++++....+. +
T Consensus 53 ~~~~~~~vLDlGcG~G~~~~~l~~~~~-~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 131 (265)
T 2i62_A 53 GAVKGELLIDIGSGPTIYQLLSACESF-TEIIVSDYTDQNLWELQKWLKKEPGAFDWSPVVTYVCDLEGNRMKGPEKEEK 131 (265)
T ss_dssp SSCCEEEEEEESCTTCCGGGTTGGGTE-EEEEEEESCHHHHHHHHHHHTTCTTCCCCHHHHHHHHHHTTTCSCHHHHHHH
T ss_pred cccCCCEEEEECCCccHHHHHHhhccc-CeEEEecCCHHHHHHHHHHHhcCCccccchhhhhhhhcccccccchHHHHHH
Confidence 345577999999999999999888764 58999999999999999887543000 0
Q ss_pred -CCCe-EEEEecCCCCC-CCC---CceeeEEeccccc----cCCChHHHHHHHHhcccCCcEEEEEeeccCCCCCcchHH
Q 018740 229 -KENF-LLVRADISRLP-FAS---SSIDAVHAGAAIH----CWSSPSTGVAEISRVLRPGGVFVGTTYIVDGPFNLIPFS 298 (351)
Q Consensus 229 -~~~i-~~~~~d~~~lp-~~~---~~fD~V~~~~vl~----h~~d~~~~l~~i~~~LkpgG~li~~~~~~~~~~~~~~~~ 298 (351)
..++ .++.+|+.+.+ +++ ++||+|++..+++ |++++..+++++.++|||||++++.++........
T Consensus 132 l~~~v~~~~~~d~~~~~~~~~~~~~~fD~v~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~~~~~~~~~~---- 207 (265)
T 2i62_A 132 LRRAIKQVLKCDVTQSQPLGGVSLPPADCLLSTLCLDAACPDLPAYRTALRNLGSLLKPGGFLVMVDALKSSYYMI---- 207 (265)
T ss_dssp HHHHEEEEEECCTTSSSTTTTCCCCCEEEEEEESCHHHHCSSHHHHHHHHHHHHTTEEEEEEEEEEEESSCCEEEE----
T ss_pred hhhhheeEEEeeeccCCCCCccccCCccEEEEhhhhhhhcCChHHHHHHHHHHHhhCCCCcEEEEEecCCCceEEc----
Confidence 0027 89999998864 355 8899999999999 66678899999999999999999988654321000
Q ss_pred HHHHHHHhhccCCccCCCHHHHHHHHHHCCCeEEEEEecC-----------eEEEEEEecCCC
Q 018740 299 RLLRQNMMQISGSYTFLSEREIEDLCRACGLVDFKCTRNR-----------GFVMFTATKPSQ 350 (351)
Q Consensus 299 ~~~~~~~~~~~~~~~~~s~~~l~~ll~~aGf~~v~~~~~g-----------~~~~~~a~kp~~ 350 (351)
.........++.+++.++++++||++++..... ...++.++|+..
T Consensus 208 -------~~~~~~~~~~~~~~~~~~l~~aGf~~~~~~~~~~~~~~~~~~~~~~~~~~a~K~~~ 263 (265)
T 2i62_A 208 -------GEQKFSSLPLGWETVRDAVEEAGYTIEQFEVISQNYSSTTSNNEGLFSLVGRKPGR 263 (265)
T ss_dssp -------TTEEEECCCCCHHHHHHHHHHTTCEEEEEEEECCCCCTTTBCCCCEEEEEEECCC-
T ss_pred -------CCccccccccCHHHHHHHHHHCCCEEEEEEEecccCCccccccceEEEEEeccccc
Confidence 011112346799999999999999998855432 467778888763
No 68
>1tw3_A COMT, carminomycin 4-O-methyltransferase; anthracycline, methylate, tailoring enzyme, polyketide, S-adenosyl-L-homocystein; HET: SAH ERT; 2.35A {Streptomyces peucetius} SCOP: a.4.5.29 c.66.1.12 PDB: 1tw2_A*
Probab=99.81 E-value=1.4e-18 Score=163.25 Aligned_cols=177 Identities=13% Similarity=0.188 Sum_probs=131.4
Q ss_pred HHHHhccCCCCCCeEEEEcCccCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHhhhCCCCCCCeEEEEecCCCCCCCC
Q 018740 167 ELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLPFAS 246 (351)
Q Consensus 167 ~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~g~~~~~i~~~~~d~~~lp~~~ 246 (351)
+.+.+.+...++.+|||||||+|.++..+++.++..+++++|+ +.+++.+++++... +. ..+++++.+|+.+ +++.
T Consensus 173 ~~l~~~~~~~~~~~vLDvG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~~~~~-~~-~~~v~~~~~d~~~-~~~~ 248 (360)
T 1tw3_A 173 DAPAAAYDWTNVRHVLDVGGGKGGFAAAIARRAPHVSATVLEM-AGTVDTARSYLKDE-GL-SDRVDVVEGDFFE-PLPR 248 (360)
T ss_dssp HHHHHHSCCTTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-TTHHHHHHHHHHHT-TC-TTTEEEEECCTTS-CCSS
T ss_pred HHHHHhCCCccCcEEEEeCCcCcHHHHHHHHhCCCCEEEEecC-HHHHHHHHHHHHhc-CC-CCceEEEeCCCCC-CCCC
Confidence 3445555666678999999999999999999988789999999 99999999988765 22 3489999999876 3333
Q ss_pred CceeeEEeccccccCCChH--HHHHHHHhcccCCcEEEEEeec-cCCCCCcchHHHHHHHHHhhccCCccCCCHHHHHHH
Q 018740 247 SSIDAVHAGAAIHCWSSPS--TGVAEISRVLRPGGVFVGTTYI-VDGPFNLIPFSRLLRQNMMQISGSYTFLSEREIEDL 323 (351)
Q Consensus 247 ~~fD~V~~~~vl~h~~d~~--~~l~~i~~~LkpgG~li~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~~l 323 (351)
.||+|++.+++||++++. .++++++++|+|||.+++.++. .... ....+........... .+...++.+++.++
T Consensus 249 -~~D~v~~~~vl~~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~-~~~~~~~~~~~~~~~~-~~~~~~t~~e~~~l 325 (360)
T 1tw3_A 249 -KADAIILSFVLLNWPDHDAVRILTRCAEALEPGGRILIHERDDLHEN-SFNEQFTELDLRMLVF-LGGALRTREKWDGL 325 (360)
T ss_dssp -CEEEEEEESCGGGSCHHHHHHHHHHHHHTEEEEEEEEEEECCBCGGG-CCSHHHHHHHHHHHHH-HSCCCCBHHHHHHH
T ss_pred -CccEEEEcccccCCCHHHHHHHHHHHHHhcCCCcEEEEEEEeccCCC-CCcchhhhccHHHhhh-cCCcCCCHHHHHHH
Confidence 499999999999999874 8999999999999999998876 3211 1111111111111111 13467899999999
Q ss_pred HHHCCCeEEEEEecC-e-----EEEEEEecCCC
Q 018740 324 CRACGLVDFKCTRNR-G-----FVMFTATKPSQ 350 (351)
Q Consensus 324 l~~aGf~~v~~~~~g-~-----~~~~~a~kp~~ 350 (351)
++++||++++....+ . ..++.++|+..
T Consensus 326 l~~aGf~~~~~~~~~~~~~~~~~~~i~~~~~~~ 358 (360)
T 1tw3_A 326 AASAGLVVEEVRQLPSPTIPYDLSLLVLAPAAT 358 (360)
T ss_dssp HHHTTEEEEEEEEEECSSSSCEEEEEEEEEC--
T ss_pred HHHCCCeEEEEEeCCCCcccCccEEEEEEeCCC
Confidence 999999998865443 2 67777888753
No 69
>3e8s_A Putative SAM dependent methyltransferase; NP_744700.1, structural genomics, joint center for structural genom JCSG; HET: SAH; 2.10A {Pseudomonas putida KT2440}
Probab=99.81 E-value=1.7e-19 Score=157.75 Aligned_cols=168 Identities=14% Similarity=0.117 Sum_probs=122.9
Q ss_pred HHHhccCCCCCCeEEEEcCccCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHhhhCCCCCCCeEEEEecCCCC---CC
Q 018740 168 LMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRL---PF 244 (351)
Q Consensus 168 ~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~g~~~~~i~~~~~d~~~l---p~ 244 (351)
.+...+...++.+|||||||+|.++..+++.+. +|+|+|+|+.+++.++++ .++.+..+|+.++ ++
T Consensus 43 ~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~--~v~~vD~s~~~~~~a~~~---------~~~~~~~~~~~~~~~~~~ 111 (227)
T 3e8s_A 43 AILLAILGRQPERVLDLGCGEGWLLRALADRGI--EAVGVDGDRTLVDAARAA---------GAGEVHLASYAQLAEAKV 111 (227)
T ss_dssp HHHHHHHHTCCSEEEEETCTTCHHHHHHHTTTC--EEEEEESCHHHHHHHHHT---------CSSCEEECCHHHHHTTCS
T ss_pred HHHHHhhcCCCCEEEEeCCCCCHHHHHHHHCCC--EEEEEcCCHHHHHHHHHh---------cccccchhhHHhhccccc
Confidence 344444444568999999999999999999865 999999999999999984 4667888888766 54
Q ss_pred CC-CceeeEEeccccccCCChHHHHHHHHhcccCCcEEEEEeeccCCCCCcchHHHHH----HHHHhh--ccCCccCCCH
Q 018740 245 AS-SSIDAVHAGAAIHCWSSPSTGVAEISRVLRPGGVFVGTTYIVDGPFNLIPFSRLL----RQNMMQ--ISGSYTFLSE 317 (351)
Q Consensus 245 ~~-~~fD~V~~~~vl~h~~d~~~~l~~i~~~LkpgG~li~~~~~~~~~~~~~~~~~~~----~~~~~~--~~~~~~~~s~ 317 (351)
.. ++||+|++..+++ ..++..+++++.++|+|||++++.+++....... .+...+ ...... ...+..+++.
T Consensus 112 ~~~~~fD~v~~~~~l~-~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 189 (227)
T 3e8s_A 112 PVGKDYDLICANFALL-HQDIIELLSAMRTLLVPGGALVIQTLHPWSVADG-DYQDGWREESFAGFAGDWQPMPWYFRTL 189 (227)
T ss_dssp CCCCCEEEEEEESCCC-SSCCHHHHHHHHHTEEEEEEEEEEECCTTTTCTT-CCSCEEEEECCTTSSSCCCCEEEEECCH
T ss_pred ccCCCccEEEECchhh-hhhHHHHHHHHHHHhCCCeEEEEEecCccccCcc-ccccccchhhhhccccCcccceEEEecH
Confidence 44 4599999999999 7899999999999999999999999876432111 000000 000000 1123456799
Q ss_pred HHHHHHHHHCCCeEEEEEec-------CeEEEEEEecC
Q 018740 318 REIEDLCRACGLVDFKCTRN-------RGFVMFTATKP 348 (351)
Q Consensus 318 ~~l~~ll~~aGf~~v~~~~~-------g~~~~~~a~kp 348 (351)
+++.++|+++||++++.... ....+++++||
T Consensus 190 ~~~~~~l~~aGf~~~~~~~~~~~~~~~~~~~~~va~k~ 227 (227)
T 3e8s_A 190 ASWLNALDMAGLRLVSLQEPQHPQSAVPQSLLMVAERH 227 (227)
T ss_dssp HHHHHHHHHTTEEEEEEECCCCTTCSSCSCEEEEEEEC
T ss_pred HHHHHHHHHcCCeEEEEecCCCCCCCCceeEEEEeecC
Confidence 99999999999999885531 12456667665
No 70
>3cc8_A Putative methyltransferase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS transferase; 1.64A {Bacillus cereus}
Probab=99.81 E-value=5.5e-19 Score=154.79 Aligned_cols=152 Identities=18% Similarity=0.207 Sum_probs=119.3
Q ss_pred HHHhccCCCCCCeEEEEcCccCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHhhhCCCCCCCeEEEEecCCC--CCCC
Q 018740 168 LMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISR--LPFA 245 (351)
Q Consensus 168 ~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~g~~~~~i~~~~~d~~~--lp~~ 245 (351)
.+.+.+. .++.+|||+|||+|.++..+++.+ .+++|+|+|+.+++.++++ ...++.+|+.+ .+++
T Consensus 24 ~l~~~~~-~~~~~vLdiG~G~G~~~~~l~~~~--~~~~~~D~~~~~~~~~~~~----------~~~~~~~d~~~~~~~~~ 90 (230)
T 3cc8_A 24 NLLKHIK-KEWKEVLDIGCSSGALGAAIKENG--TRVSGIEAFPEAAEQAKEK----------LDHVVLGDIETMDMPYE 90 (230)
T ss_dssp HHHTTCC-TTCSEEEEETCTTSHHHHHHHTTT--CEEEEEESSHHHHHHHHTT----------SSEEEESCTTTCCCCSC
T ss_pred HHHHHhc-cCCCcEEEeCCCCCHHHHHHHhcC--CeEEEEeCCHHHHHHHHHh----------CCcEEEcchhhcCCCCC
Confidence 4455554 567899999999999999999884 5999999999999999864 23688999876 6677
Q ss_pred CCceeeEEeccccccCCChHHHHHHHHhcccCCcEEEEEeeccCCCCCcchHHHHHH-HHHh------hccCCccCCCHH
Q 018740 246 SSSIDAVHAGAAIHCWSSPSTGVAEISRVLRPGGVFVGTTYIVDGPFNLIPFSRLLR-QNMM------QISGSYTFLSER 318 (351)
Q Consensus 246 ~~~fD~V~~~~vl~h~~d~~~~l~~i~~~LkpgG~li~~~~~~~~~~~~~~~~~~~~-~~~~------~~~~~~~~~s~~ 318 (351)
+++||+|++..+++|++++..+++++.++|+|||.+++.+++.... ....... ..+. ....+..+++.+
T Consensus 91 ~~~fD~v~~~~~l~~~~~~~~~l~~~~~~L~~gG~l~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (230)
T 3cc8_A 91 EEQFDCVIFGDVLEHLFDPWAVIEKVKPYIKQNGVILASIPNVSHI----SVLAPLLAGNWTYTEYGLLDKTHIRFFTFN 166 (230)
T ss_dssp TTCEEEEEEESCGGGSSCHHHHHHHTGGGEEEEEEEEEEEECTTSH----HHHHHHHTTCCCCBSSSTTBTTCCCCCCHH
T ss_pred CCccCEEEECChhhhcCCHHHHHHHHHHHcCCCCEEEEEeCCcchH----HHHHHHhcCCceeccCCCCCcceEEEecHH
Confidence 8899999999999999999999999999999999999998875321 1111110 0000 012345778999
Q ss_pred HHHHHHHHCCCeEEEEEe
Q 018740 319 EIEDLCRACGLVDFKCTR 336 (351)
Q Consensus 319 ~l~~ll~~aGf~~v~~~~ 336 (351)
++.++++++||++++...
T Consensus 167 ~~~~~l~~~Gf~~~~~~~ 184 (230)
T 3cc8_A 167 EMLRMFLKAGYSISKVDR 184 (230)
T ss_dssp HHHHHHHHTTEEEEEEEE
T ss_pred HHHHHHHHcCCeEEEEEe
Confidence 999999999999888543
No 71
>4a6d_A Hydroxyindole O-methyltransferase; melatonin, circadian clock; HET: SAM; 2.40A {Homo sapiens} PDB: 4a6e_A*
Probab=99.80 E-value=2.9e-18 Score=160.81 Aligned_cols=176 Identities=14% Similarity=0.136 Sum_probs=135.2
Q ss_pred HHHHhccCCCCCCeEEEEcCccCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHhhhCCCCCCCeEEEEecCCCCCCCC
Q 018740 167 ELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLPFAS 246 (351)
Q Consensus 167 ~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~g~~~~~i~~~~~d~~~lp~~~ 246 (351)
..+...+......+|||||||+|.++..+++++|..+++..|. |.+++.+++++... ..++++++.+|+...|.+
T Consensus 169 ~~~~~~~~~~~~~~v~DvGgG~G~~~~~l~~~~p~~~~~~~dl-p~v~~~a~~~~~~~---~~~rv~~~~gD~~~~~~~- 243 (353)
T 4a6d_A 169 RSVLTAFDLSVFPLMCDLGGGAGALAKECMSLYPGCKITVFDI-PEVVWTAKQHFSFQ---EEEQIDFQEGDFFKDPLP- 243 (353)
T ss_dssp HHHHHSSCGGGCSEEEEETCTTSHHHHHHHHHCSSCEEEEEEC-HHHHHHHHHHSCC-----CCSEEEEESCTTTSCCC-
T ss_pred HHHHHhcCcccCCeEEeeCCCCCHHHHHHHHhCCCceeEeccC-HHHHHHHHHhhhhc---ccCceeeecCccccCCCC-
Confidence 4455555656677999999999999999999999889999997 88999999887654 258999999999876644
Q ss_pred CceeeEEeccccccCCChH--HHHHHHHhcccCCcEEEEEeeccCCCCCcchHHHHHHHHHhhccCCccCCCHHHHHHHH
Q 018740 247 SSIDAVHAGAAIHCWSSPS--TGVAEISRVLRPGGVFVGTTYIVDGPFNLIPFSRLLRQNMMQISGSYTFLSEREIEDLC 324 (351)
Q Consensus 247 ~~fD~V~~~~vl~h~~d~~--~~l~~i~~~LkpgG~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~~ll 324 (351)
.+|+|++.++||+++|+. .+|+++++.|+|||.+++.+...+.. ...+..........-....-..++.++++++|
T Consensus 244 -~~D~~~~~~vlh~~~d~~~~~iL~~~~~al~pgg~lli~e~~~~~~-~~~~~~~~~~dl~ml~~~~g~ert~~e~~~ll 321 (353)
T 4a6d_A 244 -EADLYILARVLHDWADGKCSHLLERIYHTCKPGGGILVIESLLDED-RRGPLLTQLYSLNMLVQTEGQERTPTHYHMLL 321 (353)
T ss_dssp -CCSEEEEESSGGGSCHHHHHHHHHHHHHHCCTTCEEEEEECCCCTT-SCCCHHHHHHHHHHHHSSSCCCCCHHHHHHHH
T ss_pred -CceEEEeeeecccCCHHHHHHHHHHHHhhCCCCCEEEEEEeeeCCC-CCCCHHHHHHHHHHHHhCCCcCCCHHHHHHHH
Confidence 479999999999999885 78999999999999999998775432 22233222222111111133457999999999
Q ss_pred HHCCCeEEEEEecC-eEEEEEEecCC
Q 018740 325 RACGLVDFKCTRNR-GFVMFTATKPS 349 (351)
Q Consensus 325 ~~aGf~~v~~~~~g-~~~~~~a~kp~ 349 (351)
+++||+++++...+ .+.++.|+|..
T Consensus 322 ~~AGf~~v~v~~~~~~~~~i~ArKgt 347 (353)
T 4a6d_A 322 SSAGFRDFQFKKTGAIYDAILARKGT 347 (353)
T ss_dssp HHHTCEEEEEECCSSSCEEEEEECCC
T ss_pred HHCCCceEEEEEcCCceEEEEEEecC
Confidence 99999999976554 56778899864
No 72
>2ip2_A Probable phenazine-specific methyltransferase; pyocyanin, phenazine-1-carboxy PHZM; 1.80A {Pseudomonas aeruginosa}
Probab=99.80 E-value=1.5e-18 Score=161.56 Aligned_cols=174 Identities=16% Similarity=0.085 Sum_probs=130.7
Q ss_pred HHHHHhccCCCCCCeEEEEcCccCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHhhhCCCCCCCeEEEEecCCCCCCC
Q 018740 166 FELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLPFA 245 (351)
Q Consensus 166 ~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~g~~~~~i~~~~~d~~~lp~~ 245 (351)
...+...+...+ .+|||||||+|.++..+++..+..+++++|+ +.+++.+++++... +. ..+++++.+|+.+ +++
T Consensus 157 ~~~~~~~~~~~~-~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~-~~-~~~v~~~~~d~~~-~~~ 231 (334)
T 2ip2_A 157 FHEIPRLLDFRG-RSFVDVGGGSGELTKAILQAEPSARGVMLDR-EGSLGVARDNLSSL-LA-GERVSLVGGDMLQ-EVP 231 (334)
T ss_dssp HHHHHHHSCCTT-CEEEEETCTTCHHHHHHHHHCTTCEEEEEEC-TTCTHHHHHHTHHH-HH-TTSEEEEESCTTT-CCC
T ss_pred HHHHHHhCCCCC-CEEEEeCCCchHHHHHHHHHCCCCEEEEeCc-HHHHHHHHHHHhhc-CC-CCcEEEecCCCCC-CCC
Confidence 345555555545 8999999999999999999988789999999 99999999987653 11 3679999999977 554
Q ss_pred CCceeeEEeccccccCCChH--HHHHHHHhcccCCcEEEEEeeccCCCCCcchHHHHHHHHHhhccCCccCCCHHHHHHH
Q 018740 246 SSSIDAVHAGAAIHCWSSPS--TGVAEISRVLRPGGVFVGTTYIVDGPFNLIPFSRLLRQNMMQISGSYTFLSEREIEDL 323 (351)
Q Consensus 246 ~~~fD~V~~~~vl~h~~d~~--~~l~~i~~~LkpgG~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~~l 323 (351)
++||+|++.+++||++++. .+|++++++|+|||++++.++..+.... +..................++.+++.++
T Consensus 232 -~~~D~v~~~~vl~~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~--~~~~~~~~~~~~~~~~~~~~t~~e~~~l 308 (334)
T 2ip2_A 232 -SNGDIYLLSRIIGDLDEAASLRLLGNCREAMAGDGRVVVIERTISASEP--SPMSVLWDVHLFMACAGRHRTTEEVVDL 308 (334)
T ss_dssp -SSCSEEEEESCGGGCCHHHHHHHHHHHHHHSCTTCEEEEEECCBCSSSC--CHHHHHHHHHHHHHHSCCCCBHHHHHHH
T ss_pred -CCCCEEEEchhccCCCHHHHHHHHHHHHHhcCCCCEEEEEEeccCCCCC--cchhHHhhhHhHhhCCCcCCCHHHHHHH
Confidence 6799999999999998876 9999999999999999999876543211 2211111111111012345699999999
Q ss_pred HHHCCCeEEEEEec-CeEEEEEEec
Q 018740 324 CRACGLVDFKCTRN-RGFVMFTATK 347 (351)
Q Consensus 324 l~~aGf~~v~~~~~-g~~~~~~a~k 347 (351)
++++||++++.... +...++.++|
T Consensus 309 l~~aGf~~~~~~~~~~~~~~i~~~~ 333 (334)
T 2ip2_A 309 LGRGGFAVERIVDLPMETRMIVAAR 333 (334)
T ss_dssp HHHTTEEEEEEEEETTTEEEEEEEE
T ss_pred HHHCCCceeEEEECCCCCEEEEEEe
Confidence 99999999886654 4456666665
No 73
>3dp7_A SAM-dependent methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research; 2.33A {Bacteroides vulgatus}
Probab=99.80 E-value=8.3e-19 Score=165.23 Aligned_cols=167 Identities=11% Similarity=0.071 Sum_probs=125.9
Q ss_pred CCCeEEEEcCccCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHhhhCCCCCCCeEEEEecCCCC--CCCCCceeeEEe
Q 018740 177 LGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRL--PFASSSIDAVHA 254 (351)
Q Consensus 177 ~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~g~~~~~i~~~~~d~~~l--p~~~~~fD~V~~ 254 (351)
...+|||||||+|.++..+++.+|..+++++|+ +.+++.|++++... +. ..+++++.+|+.+. |++ ++||+|++
T Consensus 179 ~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~-~~-~~~v~~~~~d~~~~~~~~p-~~~D~v~~ 254 (363)
T 3dp7_A 179 HPKRLLDIGGNTGKWATQCVQYNKEVEVTIVDL-PQQLEMMRKQTAGL-SG-SERIHGHGANLLDRDVPFP-TGFDAVWM 254 (363)
T ss_dssp CCSEEEEESCTTCHHHHHHHHHSTTCEEEEEEC-HHHHHHHHHHHTTC-TT-GGGEEEEECCCCSSSCCCC-CCCSEEEE
T ss_pred CCCEEEEeCCCcCHHHHHHHHhCCCCEEEEEeC-HHHHHHHHHHHHhc-Cc-ccceEEEEccccccCCCCC-CCcCEEEE
Confidence 467999999999999999999988889999999 99999999988765 11 35899999999885 455 78999999
Q ss_pred ccccccCCChH--HHHHHHHhcccCCcEEEEEeeccCCCCCcchHH-HH-HHHHH-hhccCCccCCCHHHHHHHHHHCCC
Q 018740 255 GAAIHCWSSPS--TGVAEISRVLRPGGVFVGTTYIVDGPFNLIPFS-RL-LRQNM-MQISGSYTFLSEREIEDLCRACGL 329 (351)
Q Consensus 255 ~~vl~h~~d~~--~~l~~i~~~LkpgG~li~~~~~~~~~~~~~~~~-~~-~~~~~-~~~~~~~~~~s~~~l~~ll~~aGf 329 (351)
.+++||++++. .+|++++++|+|||.+++.++..+......... .. ....+ .........++.+++.++++++||
T Consensus 255 ~~vlh~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~e~~~ll~~AGf 334 (363)
T 3dp7_A 255 SQFLDCFSEEEVISILTRVAQSIGKDSKVYIMETLWDRQRYETASYCLTQISLYFTAMANGNSKMFHSDDLIRCIENAGL 334 (363)
T ss_dssp ESCSTTSCHHHHHHHHHHHHHHCCTTCEEEEEECCTTSCSSHHHHHHHHHHHHHHHHSSCSSCCSCCHHHHHHHHHTTTE
T ss_pred echhhhCCHHHHHHHHHHHHHhcCCCcEEEEEeeccCCccccchhhHHHHhhhhHHhhhCCCCcccCHHHHHHHHHHcCC
Confidence 99999998774 789999999999999999887765332111110 00 11111 112234457799999999999999
Q ss_pred eEEEEEe-cCe-EEEEEEec
Q 018740 330 VDFKCTR-NRG-FVMFTATK 347 (351)
Q Consensus 330 ~~v~~~~-~g~-~~~~~a~k 347 (351)
+++++.. .+. ..++.++|
T Consensus 335 ~~v~~~~~~g~~~svi~~~~ 354 (363)
T 3dp7_A 335 EVEEIQDNIGLGHSILQCRL 354 (363)
T ss_dssp EESCCCCCBTTTBEEEEEEE
T ss_pred eEEEEEeCCCCCceEEEEee
Confidence 9988652 232 44444443
No 74
>3cgg_A SAM-dependent methyltransferase; NP_600671.1, methyltransferase domain, structural genomics; HET: NHE CIT; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=99.80 E-value=3.1e-18 Score=146.00 Aligned_cols=138 Identities=19% Similarity=0.188 Sum_probs=116.9
Q ss_pred CCCeEEEEcCccCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHhhhCCCCCCCeEEEEecCCCCCCCCCceeeEEec-
Q 018740 177 LGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLPFASSSIDAVHAG- 255 (351)
Q Consensus 177 ~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~g~~~~~i~~~~~d~~~lp~~~~~fD~V~~~- 255 (351)
++.+|||+|||+|.++..+++.+. +++|+|+|+.+++.++++ ..++.++.+|+..+++++++||+|++.
T Consensus 46 ~~~~vLdiG~G~G~~~~~l~~~~~--~v~~~D~~~~~~~~a~~~--------~~~~~~~~~d~~~~~~~~~~~D~i~~~~ 115 (195)
T 3cgg_A 46 RGAKILDAGCGQGRIGGYLSKQGH--DVLGTDLDPILIDYAKQD--------FPEARWVVGDLSVDQISETDFDLIVSAG 115 (195)
T ss_dssp TTCEEEEETCTTTHHHHHHHHTTC--EEEEEESCHHHHHHHHHH--------CTTSEEEECCTTTSCCCCCCEEEEEECC
T ss_pred CCCeEEEECCCCCHHHHHHHHCCC--cEEEEcCCHHHHHHHHHh--------CCCCcEEEcccccCCCCCCceeEEEECC
Confidence 578999999999999999999865 999999999999999986 456899999999988888899999998
Q ss_pred cccccCCC--hHHHHHHHHhcccCCcEEEEEeeccCCCCCcchHHHHHHHHHhhccCCccCCCHHHHHHHHHHCCCeEEE
Q 018740 256 AAIHCWSS--PSTGVAEISRVLRPGGVFVGTTYIVDGPFNLIPFSRLLRQNMMQISGSYTFLSEREIEDLCRACGLVDFK 333 (351)
Q Consensus 256 ~vl~h~~d--~~~~l~~i~~~LkpgG~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~~ll~~aGf~~v~ 333 (351)
.+++|+.. ...+++++.++|+|||.+++..+... .++.+++.++++++||++++
T Consensus 116 ~~~~~~~~~~~~~~l~~~~~~l~~~G~l~~~~~~~~------------------------~~~~~~~~~~l~~~Gf~~~~ 171 (195)
T 3cgg_A 116 NVMGFLAEDGREPALANIHRALGADGRAVIGFGAGR------------------------GWVFGDFLEVAERVGLELEN 171 (195)
T ss_dssp CCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEETTS------------------------SCCHHHHHHHHHHHTEEEEE
T ss_pred cHHhhcChHHHHHHHHHHHHHhCCCCEEEEEeCCCC------------------------CcCHHHHHHHHHHcCCEEee
Confidence 78999853 47899999999999999999776421 25789999999999999887
Q ss_pred EEec---------CeEEEEEEecC
Q 018740 334 CTRN---------RGFVMFTATKP 348 (351)
Q Consensus 334 ~~~~---------g~~~~~~a~kp 348 (351)
.... ..+.+++++|+
T Consensus 172 ~~~~~~~~~~~~~~~~~~~v~~k~ 195 (195)
T 3cgg_A 172 AFESWDLKPFVQGSEFLVAVFTKK 195 (195)
T ss_dssp EESSTTCCBCCTTCSEEEEEEEEC
T ss_pred eecccccCcCCCCCcEEEEEEecC
Confidence 5432 34667777764
No 75
>3g07_A 7SK snRNA methylphosphate capping enzyme; structural genomics consortium (SGC), methyltransferase, phosphoprotein, S-adenosyl-L-methionine; HET: SAM; 2.65A {Homo sapiens}
Probab=99.80 E-value=1.1e-19 Score=166.29 Aligned_cols=153 Identities=16% Similarity=0.165 Sum_probs=113.6
Q ss_pred CCCeEEEEcCccCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHhhhCCCC----------------------------
Q 018740 177 LGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFP---------------------------- 228 (351)
Q Consensus 177 ~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~g~~---------------------------- 228 (351)
++.+|||||||+|.++..+++..+..+|+|+|+|+.|++.|++++... +..
T Consensus 46 ~~~~VLDiGCG~G~~~~~la~~~~~~~v~gvDis~~~i~~A~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 124 (292)
T 3g07_A 46 RGRDVLDLGCNVGHLTLSIACKWGPSRMVGLDIDSRLIHSARQNIRHY-LSEELRLPPQTLEGDPGAEGEEGTTTVRKRS 124 (292)
T ss_dssp TTSEEEEESCTTCHHHHHHHHHTCCSEEEEEESCHHHHHHHHHTC-----------------------------------
T ss_pred CCCcEEEeCCCCCHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHHHhh-hhhhccccccccccccccccccccccccccc
Confidence 578999999999999999999966679999999999999999876543 100
Q ss_pred ----------------------------CCCeEEEEecCCCCC-----CCCCceeeEEeccccccCC------ChHHHHH
Q 018740 229 ----------------------------KENFLLVRADISRLP-----FASSSIDAVHAGAAIHCWS------SPSTGVA 269 (351)
Q Consensus 229 ----------------------------~~~i~~~~~d~~~lp-----~~~~~fD~V~~~~vl~h~~------d~~~~l~ 269 (351)
..++.+.++|+...+ +.+++||+|+|..+++|+. ++..+++
T Consensus 125 ~~p~~~~~~~g~~~~p~~~~~~~~~~~~p~~v~f~~~d~~~~~~~~~~~~~~~fD~I~~~~vl~~ihl~~~~~~~~~~l~ 204 (292)
T 3g07_A 125 CFPASLTASRGPIAAPQVPLDGADTSVFPNNVVFVTGNYVLDRDDLVEAQTPEYDVVLCLSLTKWVHLNWGDEGLKRMFR 204 (292)
T ss_dssp -----------------CCSSTTCCSSTTTTEEEEECCCCCSSHHHHTTCCCCEEEEEEESCHHHHHHHHHHHHHHHHHH
T ss_pred cccchhhhccCccccccccccccccccccccceEEecccccCccccccccCCCcCEEEEChHHHHhhhcCCHHHHHHHHH
Confidence 148999999997654 5678999999999998874 6779999
Q ss_pred HHHhcccCCcEEEEEeeccCCCCCcchHHHHHHHHHhhccCCccCCCHHHHHHHHHH--CCCeEEEEE
Q 018740 270 EISRVLRPGGVFVGTTYIVDGPFNLIPFSRLLRQNMMQISGSYTFLSEREIEDLCRA--CGLVDFKCT 335 (351)
Q Consensus 270 ~i~~~LkpgG~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~~ll~~--aGf~~v~~~ 335 (351)
+++++|+|||+|++.....+.+.............+. ...+.++++..+|.+ +||+.++.+
T Consensus 205 ~~~~~LkpGG~lil~~~~~~~y~~~~~~~~~~~~~~~-----~~~~~p~~~~~~L~~~~~GF~~~~~~ 267 (292)
T 3g07_A 205 RIYRHLRPGGILVLEPQPWSSYGKRKTLTETIYKNYY-----RIQLKPEQFSSYLTSPDVGFSSYELV 267 (292)
T ss_dssp HHHHHEEEEEEEEEECCCHHHHHTTTTSCHHHHHHHH-----HCCCCGGGHHHHHTSTTTCCCEEEEC
T ss_pred HHHHHhCCCcEEEEecCCchhhhhhhcccHHHHhhhh-----cEEEcHHHHHHHHHhcCCCceEEEEe
Confidence 9999999999999976543221111111111222221 123457899999999 999877744
No 76
>2kw5_A SLR1183 protein; structural genomics, northeast structural genomics consortium (NESG), PSI-2, protein structure initiative, unknown function; NMR {Synechocystis} PDB: 3mer_A
Probab=99.80 E-value=1.3e-19 Score=156.15 Aligned_cols=135 Identities=16% Similarity=0.154 Sum_probs=111.8
Q ss_pred eEEEEcCccCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHhhhCCCCCCCeEEEEecCCCCCCCCCceeeEEeccccc
Q 018740 180 NIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLPFASSSIDAVHAGAAIH 259 (351)
Q Consensus 180 ~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~g~~~~~i~~~~~d~~~lp~~~~~fD~V~~~~vl~ 259 (351)
+|||+|||+|.++..+++.+. +|+|+|+|+.+++.+++++... ..++.++++|+.++++++++||+|++.. .
T Consensus 32 ~vLdiGcG~G~~~~~l~~~~~--~v~~vD~s~~~~~~a~~~~~~~----~~~~~~~~~d~~~~~~~~~~fD~v~~~~--~ 103 (202)
T 2kw5_A 32 KILCLAEGEGRNACFLASLGY--EVTAVDQSSVGLAKAKQLAQEK----GVKITTVQSNLADFDIVADAWEGIVSIF--C 103 (202)
T ss_dssp EEEECCCSCTHHHHHHHTTTC--EEEEECSSHHHHHHHHHHHHHH----TCCEEEECCBTTTBSCCTTTCSEEEEEC--C
T ss_pred CEEEECCCCCHhHHHHHhCCC--eEEEEECCHHHHHHHHHHHHhc----CCceEEEEcChhhcCCCcCCccEEEEEh--h
Confidence 999999999999999998865 9999999999999999998776 4589999999999988889999999954 4
Q ss_pred cC--CChHHHHHHHHhcccCCcEEEEEeeccCCCCCcchHHHHHHHHHhhccCCccCCCHHHHHHHHHHCCCeEEEE
Q 018740 260 CW--SSPSTGVAEISRVLRPGGVFVGTTYIVDGPFNLIPFSRLLRQNMMQISGSYTFLSEREIEDLCRACGLVDFKC 334 (351)
Q Consensus 260 h~--~d~~~~l~~i~~~LkpgG~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~~ll~~aGf~~v~~ 334 (351)
|+ .++..+++++.++|+|||.+++.++..+... + .......+..+++.+++.++++ ||++++.
T Consensus 104 ~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~----~------~~~~~~~~~~~~~~~~l~~~l~--Gf~v~~~ 168 (202)
T 2kw5_A 104 HLPSSLRQQLYPKVYQGLKPGGVFILEGFAPEQLQ----Y------NTGGPKDLDLLPKLETLQSELP--SLNWLIA 168 (202)
T ss_dssp CCCHHHHHHHHHHHHTTCCSSEEEEEEEECTTTGG----G------TSCCSSSGGGCCCHHHHHHHCS--SSCEEEE
T ss_pred cCCHHHHHHHHHHHHHhcCCCcEEEEEEecccccc----C------CCCCCCcceeecCHHHHHHHhc--CceEEEE
Confidence 44 3667999999999999999999998765321 0 0011123456899999999999 9998873
No 77
>3reo_A (ISO)eugenol O-methyltransferase; directed evolution, saturation mutagenesis, regioselectivity transferase; HET: SAH EUG; 1.90A {Clarkia breweri} PDB: 3tky_A* 1kyz_A* 1kyw_A*
Probab=99.79 E-value=6.6e-18 Score=159.29 Aligned_cols=169 Identities=14% Similarity=0.107 Sum_probs=124.9
Q ss_pred HHHHhccC-CCCCCeEEEEcCccCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHhhhCCCCCCCeEEEEecCCCCCCC
Q 018740 167 ELMKGYLK-PVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLPFA 245 (351)
Q Consensus 167 ~~l~~~l~-~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~g~~~~~i~~~~~d~~~lp~~ 245 (351)
+.+...+. ..+..+|||||||+|.++..+++.+|..+++++|+ +.+++.+++ .++++++.+|+.+ |++
T Consensus 192 ~~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~---------~~~v~~~~~d~~~-~~p 260 (368)
T 3reo_A 192 KKILEMYNGFEGLTTIVDVGGGTGAVASMIVAKYPSINAINFDL-PHVIQDAPA---------FSGVEHLGGDMFD-GVP 260 (368)
T ss_dssp HHHHTTCCTTTTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHTTCCC---------CTTEEEEECCTTT-CCC
T ss_pred HHHHHhcccccCCCEEEEeCCCcCHHHHHHHHhCCCCEEEEEeh-HHHHHhhhh---------cCCCEEEecCCCC-CCC
Confidence 34444444 45568999999999999999999998889999999 888877654 4789999999987 666
Q ss_pred CCceeeEEeccccccCCChH--HHHHHHHhcccCCcEEEEEeeccCCCCCcchH--HH-HHHHHHhhccCCccCCCHHHH
Q 018740 246 SSSIDAVHAGAAIHCWSSPS--TGVAEISRVLRPGGVFVGTTYIVDGPFNLIPF--SR-LLRQNMMQISGSYTFLSEREI 320 (351)
Q Consensus 246 ~~~fD~V~~~~vl~h~~d~~--~~l~~i~~~LkpgG~li~~~~~~~~~~~~~~~--~~-~~~~~~~~~~~~~~~~s~~~l 320 (351)
++ |+|++.+++||++++. .+|++++++|+|||++++.+...+........ .. ...............++.+++
T Consensus 261 ~~--D~v~~~~vlh~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~d~~~~~~~~~g~~rt~~e~ 338 (368)
T 3reo_A 261 KG--DAIFIKWICHDWSDEHCLKLLKNCYAALPDHGKVIVAEYILPPSPDPSIATKVVIHTDALMLAYNPGGKERTEKEF 338 (368)
T ss_dssp CC--SEEEEESCGGGBCHHHHHHHHHHHHHHSCTTCEEEEEECCCCSSCCCCHHHHHHHHHHHHHHHHSSBCCCCCHHHH
T ss_pred CC--CEEEEechhhcCCHHHHHHHHHHHHHHcCCCCEEEEEEeccCCCCCCchhhhHHHhhhHHHHhhcCCCccCCHHHH
Confidence 54 9999999999998775 78999999999999999988775432211111 11 111111111123456799999
Q ss_pred HHHHHHCCCeEEEEEe-cCeEEEEEEecC
Q 018740 321 EDLCRACGLVDFKCTR-NRGFVMFTATKP 348 (351)
Q Consensus 321 ~~ll~~aGf~~v~~~~-~g~~~~~~a~kp 348 (351)
.++++++||++++... .+...++.+.|+
T Consensus 339 ~~ll~~AGF~~v~~~~~~~~~~vie~~k~ 367 (368)
T 3reo_A 339 QALAMASGFRGFKVASCAFNTYVMEFLKT 367 (368)
T ss_dssp HHHHHHTTCCEEEEEEEETTEEEEEEECC
T ss_pred HHHHHHCCCeeeEEEEeCCCcEEEEEEeC
Confidence 9999999999998654 344455555554
No 78
>2qe6_A Uncharacterized protein TFU_2867; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: NEP SAM; 1.95A {Thermobifida fusca}
Probab=99.79 E-value=3.8e-18 Score=154.47 Aligned_cols=146 Identities=17% Similarity=0.107 Sum_probs=114.6
Q ss_pred CCCeEEEEcCcc---CHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHhhhCCCCCCCeEEEEecCCCCC----------
Q 018740 177 LGGNIIDASCGS---GLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLP---------- 243 (351)
Q Consensus 177 ~~~~vLDiGcG~---G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~g~~~~~i~~~~~d~~~lp---------- 243 (351)
+..+|||||||+ |.++..+.+..+..+|+|+|+|+.|++.|++++.. ..++.++.+|+.+.+
T Consensus 77 ~~~~vLDlGcG~pt~G~~~~~~~~~~p~~~v~~vD~sp~~l~~Ar~~~~~-----~~~v~~~~~D~~~~~~~~~~~~~~~ 151 (274)
T 2qe6_A 77 GISQFLDLGSGLPTVQNTHEVAQSVNPDARVVYVDIDPMVLTHGRALLAK-----DPNTAVFTADVRDPEYILNHPDVRR 151 (274)
T ss_dssp CCCEEEEETCCSCCSSCHHHHHHHHCTTCEEEEEESSHHHHHHHHHHHTT-----CTTEEEEECCTTCHHHHHHSHHHHH
T ss_pred CCCEEEEECCCCCCCChHHHHHHHhCCCCEEEEEECChHHHHHHHHhcCC-----CCCeEEEEeeCCCchhhhccchhhc
Confidence 347999999999 99988888777777999999999999999998743 368999999997631
Q ss_pred -CCCCceeeEEeccccccCCC--hHHHHHHHHhcccCCcEEEEEeeccCCCCCcchHHHHHHHHHhhccCCccCCCHHHH
Q 018740 244 -FASSSIDAVHAGAAIHCWSS--PSTGVAEISRVLRPGGVFVGTTYIVDGPFNLIPFSRLLRQNMMQISGSYTFLSEREI 320 (351)
Q Consensus 244 -~~~~~fD~V~~~~vl~h~~d--~~~~l~~i~~~LkpgG~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~l 320 (351)
++..+||+|++..++||+++ +..+|++++++|+|||+|++.+...+. . .........+........+++.+++
T Consensus 152 ~~d~~~~d~v~~~~vlh~~~d~~~~~~l~~~~~~L~pGG~l~i~~~~~~~--~--~~~~~~~~~~~~~~~~~~~~s~~ei 227 (274)
T 2qe6_A 152 MIDFSRPAAIMLVGMLHYLSPDVVDRVVGAYRDALAPGSYLFMTSLVDTG--L--PAQQKLARITRENLGEGWARTPEEI 227 (274)
T ss_dssp HCCTTSCCEEEETTTGGGSCTTTHHHHHHHHHHHSCTTCEEEEEEEBCSS--C--HHHHHHHHHHHHHHSCCCCBCHHHH
T ss_pred cCCCCCCEEEEEechhhhCCcHHHHHHHHHHHHhCCCCcEEEEEEecCcc--h--HHHHHHHHHHHhcCCCCccCCHHHH
Confidence 23358999999999999987 789999999999999999999987642 1 1112222222221224567899999
Q ss_pred HHHHHHCCCeEEE
Q 018740 321 EDLCRACGLVDFK 333 (351)
Q Consensus 321 ~~ll~~aGf~~v~ 333 (351)
.+++ .||++++
T Consensus 228 ~~~l--~G~~l~~ 238 (274)
T 2qe6_A 228 ERQF--GDFELVE 238 (274)
T ss_dssp HHTT--TTCEECT
T ss_pred HHHh--CCCeEcc
Confidence 9999 5998765
No 79
>3m70_A Tellurite resistance protein TEHB homolog; structural genomics, PSI-2, protein ST initiative; 1.95A {Haemophilus influenzae}
Probab=99.79 E-value=2e-18 Score=156.98 Aligned_cols=136 Identities=15% Similarity=0.123 Sum_probs=112.2
Q ss_pred CCCeEEEEcCccCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHhhhCCCCCCCeEEEEecCCCCCCCCCceeeEEecc
Q 018740 177 LGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLPFASSSIDAVHAGA 256 (351)
Q Consensus 177 ~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~g~~~~~i~~~~~d~~~lp~~~~~fD~V~~~~ 256 (351)
++.+|||+|||+|.++..+++.+. +|+|+|+|+.+++.+++++... ..++.++++|+.++++ +++||+|++..
T Consensus 120 ~~~~vLD~GcG~G~~~~~l~~~g~--~v~~vD~s~~~~~~a~~~~~~~----~~~~~~~~~d~~~~~~-~~~fD~i~~~~ 192 (286)
T 3m70_A 120 SPCKVLDLGCGQGRNSLYLSLLGY--DVTSWDHNENSIAFLNETKEKE----NLNISTALYDINAANI-QENYDFIVSTV 192 (286)
T ss_dssp CSCEEEEESCTTCHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHHHT----TCCEEEEECCGGGCCC-CSCEEEEEECS
T ss_pred CCCcEEEECCCCCHHHHHHHHCCC--eEEEEECCHHHHHHHHHHHHHc----CCceEEEEeccccccc-cCCccEEEEcc
Confidence 578999999999999999999976 9999999999999999998876 3489999999999876 78999999999
Q ss_pred ccccCCCh--HHHHHHHHhcccCCcEEEEEeeccCCCCCcchHHHHHHHHHhhccCCccCCCHHHHHHHHHHCCCeEEEE
Q 018740 257 AIHCWSSP--STGVAEISRVLRPGGVFVGTTYIVDGPFNLIPFSRLLRQNMMQISGSYTFLSEREIEDLCRACGLVDFKC 334 (351)
Q Consensus 257 vl~h~~d~--~~~l~~i~~~LkpgG~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~~ll~~aGf~~v~~ 334 (351)
+++|++++ ..+++++.++|+|||.+++........... .......++.+++.++++. |+++..
T Consensus 193 ~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~-------------~~~~~~~~~~~~l~~~~~~--~~~~~~ 257 (286)
T 3m70_A 193 VFMFLNRERVPSIIKNMKEHTNVGGYNLIVAAMSTDDVPC-------------PLPFSFTFAENELKEYYKD--WEFLEY 257 (286)
T ss_dssp SGGGSCGGGHHHHHHHHHHTEEEEEEEEEEEEBCCSSSCC-------------SSCCSCCBCTTHHHHHTTT--SEEEEE
T ss_pred chhhCCHHHHHHHHHHHHHhcCCCcEEEEEEecCCCCCCC-------------CCCccccCCHHHHHHHhcC--CEEEEE
Confidence 99999655 499999999999999988876654321111 1123456788999999865 877664
No 80
>2g72_A Phenylethanolamine N-methyltransferase; HET: SAM F21; 2.00A {Homo sapiens} SCOP: c.66.1.15 PDB: 1yz3_A* 2an4_A* 2an5_A* 2g70_A* 2g71_A* 2an3_A* 2g8n_A* 2ony_A* 3hcb_A* 3hcc_A* 3hcd_A* 3hcf_A* 3kpj_A* 3kpu_A* 3kpv_A* 3kpw_A* 3kpy_A* 3kqm_A* 3kqo_A* 3kqp_A* ...
Probab=99.78 E-value=6.1e-19 Score=160.82 Aligned_cols=147 Identities=18% Similarity=0.217 Sum_probs=106.2
Q ss_pred CCCeEEEEcCccCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHhhhC----------------CCC-----------C
Q 018740 177 LGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQES----------------NFP-----------K 229 (351)
Q Consensus 177 ~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~----------------g~~-----------~ 229 (351)
++.+|||||||+|.+...++.. ...+|+|+|+|+.|++.|++++.... +.. .
T Consensus 71 ~~~~vLDiGcG~G~~~~l~~~~-~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~ 149 (289)
T 2g72_A 71 SGRTLIDIGSGPTVYQLLSACS-HFEDITMTDFLEVNRQELGRWLQEEPGAFNWSMYSQHACLIEGKGECWQDKERQLRA 149 (289)
T ss_dssp CCSEEEEETCTTCCGGGTTGGG-GCSEEEEECSCHHHHHHHHHHHTTCTTCCCCHHHHHHHHHHHCSCCCHHHHHHHHHH
T ss_pred CCCeEEEECCCcChHHHHhhcc-CCCeEEEeCCCHHHHHHHHHHHhhCcccccchhhhhHHHHhcCcccchhhhHHHHHh
Confidence 5779999999999954433332 23499999999999999998654310 000 0
Q ss_pred CCeEEEEecCCC-CCC-----CCCceeeEEecccccc----CCChHHHHHHHHhcccCCcEEEEEeeccCCCCCcchHHH
Q 018740 230 ENFLLVRADISR-LPF-----ASSSIDAVHAGAAIHC----WSSPSTGVAEISRVLRPGGVFVGTTYIVDGPFNLIPFSR 299 (351)
Q Consensus 230 ~~i~~~~~d~~~-lp~-----~~~~fD~V~~~~vl~h----~~d~~~~l~~i~~~LkpgG~li~~~~~~~~~~~~~~~~~ 299 (351)
..+.++.+|+.+ +|+ ++++||+|+++.+++| ++++..+|++++++|||||+|++.......+...
T Consensus 150 ~~~~~~~~D~~~~~~~~~~~~~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~r~LkpGG~l~~~~~~~~~~~~~----- 224 (289)
T 2g72_A 150 RVKRVLPIDVHQPQPLGAGSPAPLPADALVSAFCLEAVSPDLASFQRALDHITTLLRPGGHLLLIGALEESWYLA----- 224 (289)
T ss_dssp HEEEEECCCTTSSSTTCSSCSSCSSEEEEEEESCHHHHCSSHHHHHHHHHHHHTTEEEEEEEEEEEEESCCEEEE-----
T ss_pred hhceEEecccCCCCCccccccCCCCCCEEEehhhhhhhcCCHHHHHHHHHHHHHhcCCCCEEEEEEecCcceEEc-----
Confidence 015677789987 654 3467999999999999 6678899999999999999999976443211000
Q ss_pred HHHHHHhhccCCccCCCHHHHHHHHHHCCCeEEEEE
Q 018740 300 LLRQNMMQISGSYTFLSEREIEDLCRACGLVDFKCT 335 (351)
Q Consensus 300 ~~~~~~~~~~~~~~~~s~~~l~~ll~~aGf~~v~~~ 335 (351)
........+++.+++.++|+++||++++..
T Consensus 225 ------~~~~~~~~~~~~~~l~~~l~~aGf~~~~~~ 254 (289)
T 2g72_A 225 ------GEARLTVVPVSEEEVREALVRSGYKVRDLR 254 (289)
T ss_dssp ------TTEEEECCCCCHHHHHHHHHHTTEEEEEEE
T ss_pred ------CCeeeeeccCCHHHHHHHHHHcCCeEEEee
Confidence 011112457899999999999999988743
No 81
>2p8j_A S-adenosylmethionine-dependent methyltransferase; NP_349143.1; HET: PGE GOL; 2.00A {Clostridium acetobutylicum}
Probab=99.78 E-value=8.4e-19 Score=151.77 Aligned_cols=152 Identities=19% Similarity=0.255 Sum_probs=115.7
Q ss_pred CCCCeEEEEcCccCHH-HHHHHHhCCCCeEEEEeCCHHHHHHHHHHHhhhCCCCCCCeEEEEecCCCCCCCCCceeeEEe
Q 018740 176 VLGGNIIDASCGSGLF-SRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLPFASSSIDAVHA 254 (351)
Q Consensus 176 ~~~~~vLDiGcG~G~~-~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~g~~~~~i~~~~~d~~~lp~~~~~fD~V~~ 254 (351)
.++.+|||+|||+|.+ ...++..+. +|+|+|+|+.+++.+++++... ..++.++++|+.++++++++||+|++
T Consensus 22 ~~~~~vLDiGcG~G~~~~~~~~~~~~--~v~~vD~s~~~~~~a~~~~~~~----~~~~~~~~~d~~~~~~~~~~fD~v~~ 95 (209)
T 2p8j_A 22 NLDKTVLDCGAGGDLPPLSIFVEDGY--KTYGIEISDLQLKKAENFSREN----NFKLNISKGDIRKLPFKDESMSFVYS 95 (209)
T ss_dssp SSCSEEEEESCCSSSCTHHHHHHTTC--EEEEEECCHHHHHHHHHHHHHH----TCCCCEEECCTTSCCSCTTCEEEEEE
T ss_pred CCCCEEEEECCCCCHHHHHHHHhCCC--EEEEEECCHHHHHHHHHHHHhc----CCceEEEECchhhCCCCCCceeEEEE
Confidence 3467999999999997 455555544 9999999999999999988776 46789999999999988899999999
Q ss_pred ccccccC--CChHHHHHHHHhcccCCcEEEEEeeccCCCCCc--chHHHHHHHHHhh-ccCCccCCCHHHHHHHHHHCCC
Q 018740 255 GAAIHCW--SSPSTGVAEISRVLRPGGVFVGTTYIVDGPFNL--IPFSRLLRQNMMQ-ISGSYTFLSEREIEDLCRACGL 329 (351)
Q Consensus 255 ~~vl~h~--~d~~~~l~~i~~~LkpgG~li~~~~~~~~~~~~--~~~~~~~~~~~~~-~~~~~~~~s~~~l~~ll~~aGf 329 (351)
..+++|+ .++..+++++.++|+|||.+++.++........ .++.......... .+...++++.+++.++++++||
T Consensus 96 ~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~g~ 175 (209)
T 2p8j_A 96 YGTIFHMRKNDVKEAIDEIKRVLKPGGLACINFLTTKDERYNKGEKIGEGEFLQLERGEKVIHSYVSLEEADKYFKDMKV 175 (209)
T ss_dssp CSCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEETTSTTTTCSEEEETTEEEECC-CCCEEEEEECHHHHHHTTTTSEE
T ss_pred cChHHhCCHHHHHHHHHHHHHHcCCCcEEEEEEecccchhccchhhhccccceeccCCCceeEEecCHHHHHHHHhhcCc
Confidence 9999999 577899999999999999999999875432110 0000000000000 1112358899999999999999
Q ss_pred eEEE
Q 018740 330 VDFK 333 (351)
Q Consensus 330 ~~v~ 333 (351)
...+
T Consensus 176 ~~~~ 179 (209)
T 2p8j_A 176 LFKE 179 (209)
T ss_dssp EEEE
T ss_pred eeee
Confidence 7665
No 82
>1wzn_A SAM-dependent methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; HET: SAH; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=99.78 E-value=7.8e-18 Score=150.06 Aligned_cols=173 Identities=20% Similarity=0.234 Sum_probs=123.5
Q ss_pred HHhccCCCCCCeEEEEcCccCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHhhhCCCCCCCeEEEEecCCCCCCCCCc
Q 018740 169 MKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLPFASSS 248 (351)
Q Consensus 169 l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~g~~~~~i~~~~~d~~~lp~~~~~ 248 (351)
+.......++.+|||+|||+|.++..+++.+. +|+|+|+|+.|++.+++++... ..++.++++|+.+++++ ++
T Consensus 33 ~~~~~~~~~~~~vLDlGcG~G~~~~~l~~~~~--~v~gvD~s~~~l~~a~~~~~~~----~~~v~~~~~d~~~~~~~-~~ 105 (252)
T 1wzn_A 33 IFKEDAKREVRRVLDLACGTGIPTLELAERGY--EVVGLDLHEEMLRVARRKAKER----NLKIEFLQGDVLEIAFK-NE 105 (252)
T ss_dssp HHHHTCSSCCCEEEEETCTTCHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHHHT----TCCCEEEESCGGGCCCC-SC
T ss_pred HHHHhcccCCCEEEEeCCCCCHHHHHHHHCCC--eEEEEECCHHHHHHHHHHHHhc----CCceEEEECChhhcccC-CC
Confidence 33334445678999999999999999999865 9999999999999999988776 45799999999988764 68
Q ss_pred eeeEEecc-ccccCC--ChHHHHHHHHhcccCCcEEEEEeeccCCC--C-Cc-------------------chHHHHHH-
Q 018740 249 IDAVHAGA-AIHCWS--SPSTGVAEISRVLRPGGVFVGTTYIVDGP--F-NL-------------------IPFSRLLR- 302 (351)
Q Consensus 249 fD~V~~~~-vl~h~~--d~~~~l~~i~~~LkpgG~li~~~~~~~~~--~-~~-------------------~~~~~~~~- 302 (351)
||+|++.. .++|+. ++..+++++.++|+|||.+++..++.... . .. .+......
T Consensus 106 fD~v~~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 185 (252)
T 1wzn_A 106 FDAVTMFFSTIMYFDEEDLRKLFSKVAEALKPGGVFITDFPCWFYGGRDGPVVWNEQKGEEKLVIMDWREVEPAVQKLRF 185 (252)
T ss_dssp EEEEEECSSGGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEC-------CCEEEEEEETTEEEEEEEEEEEETTTTEEEE
T ss_pred ccEEEEcCCchhcCCHHHHHHHHHHHHHHcCCCeEEEEeccchhcccCCCCeeeeccCCCeeEEEEeecccccccceeeh
Confidence 99999874 455554 45689999999999999999877652100 0 00 00000000
Q ss_pred ----HHHhh--------ccCCccCCCHHHHHHHHHHCCCeEEEEEec--------CeEEEEEEecCC
Q 018740 303 ----QNMMQ--------ISGSYTFLSEREIEDLCRACGLVDFKCTRN--------RGFVMFTATKPS 349 (351)
Q Consensus 303 ----~~~~~--------~~~~~~~~s~~~l~~ll~~aGf~~v~~~~~--------g~~~~~~a~kp~ 349 (351)
..... ...+.++++.+++. +|+++||++++.... ....+++++|++
T Consensus 186 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~e~~-~l~~aGF~~~~~~~~~~~~~~~~~~r~~~va~k~~ 251 (252)
T 1wzn_A 186 KRLVQILRPNGEVKAFLVDDELNIYTPREVR-LLAEKYFEKVKIYGNLKRELSPNDMRYWIVGIAKS 251 (252)
T ss_dssp EEEEEEECTTSCEEEEEEEEEEECCCHHHHH-HHHTTTSSEEEEEETTBSSCCTTCCEEEEEEECCC
T ss_pred eeeeeecccCCceeEEEEeeeeeeecHHHHH-HHHHhcCceeeeecccccccCCCCceEEEEEEeec
Confidence 00000 01234689999997 899999998886432 346778888874
No 83
>3lst_A CALO1 methyltransferase; calicheamicin, enediyne, SAH, STRU genomics, PSI-2, protein structure initiative; HET: SAH; 2.40A {Micromonospora echinospora}
Probab=99.78 E-value=2.1e-18 Score=161.48 Aligned_cols=170 Identities=15% Similarity=0.093 Sum_probs=122.5
Q ss_pred HHHHhccCCCCCCeEEEEcCccCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHhhhCCCCCCCeEEEEecCCCCCCCC
Q 018740 167 ELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLPFAS 246 (351)
Q Consensus 167 ~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~g~~~~~i~~~~~d~~~lp~~~ 246 (351)
+.+...+...++.+|||||||+|.++..+++.++..+++++|+ +.++. ++++... + ...+++++.+|+. .+.+
T Consensus 174 ~~~~~~~~~~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~--~~~~~~~-~-~~~~v~~~~~d~~-~~~p- 246 (348)
T 3lst_A 174 LILARAGDFPATGTVADVGGGRGGFLLTVLREHPGLQGVLLDR-AEVVA--RHRLDAP-D-VAGRWKVVEGDFL-REVP- 246 (348)
T ss_dssp HHHHHHSCCCSSEEEEEETCTTSHHHHHHHHHCTTEEEEEEEC-HHHHT--TCCCCCG-G-GTTSEEEEECCTT-TCCC-
T ss_pred HHHHHhCCccCCceEEEECCccCHHHHHHHHHCCCCEEEEecC-HHHhh--ccccccc-C-CCCCeEEEecCCC-CCCC-
Confidence 3455555666678999999999999999999988889999999 44444 2222111 1 1467999999996 3444
Q ss_pred CceeeEEeccccccCCCh--HHHHHHHHhcccCCcEEEEEeeccCCCCCcchHHHHHHHHHhhccCCccCCCHHHHHHHH
Q 018740 247 SSIDAVHAGAAIHCWSSP--STGVAEISRVLRPGGVFVGTTYIVDGPFNLIPFSRLLRQNMMQISGSYTFLSEREIEDLC 324 (351)
Q Consensus 247 ~~fD~V~~~~vl~h~~d~--~~~l~~i~~~LkpgG~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~~ll 324 (351)
+||+|++.+++||++|+ ..+|++++++|||||++++.++..+.... +..................++.+++.+++
T Consensus 247 -~~D~v~~~~vlh~~~d~~~~~~L~~~~~~LkpgG~l~i~e~~~~~~~~--~~~~~~~d~~~~~~~~~~~~t~~e~~~ll 323 (348)
T 3lst_A 247 -HADVHVLKRILHNWGDEDSVRILTNCRRVMPAHGRVLVIDAVVPEGND--AHQSKEMDFMMLAARTGQERTAAELEPLF 323 (348)
T ss_dssp -CCSEEEEESCGGGSCHHHHHHHHHHHHHTCCTTCEEEEEECCBCSSSS--CCHHHHHHHHHHHTTSCCCCBHHHHHHHH
T ss_pred -CCcEEEEehhccCCCHHHHHHHHHHHHHhcCCCCEEEEEEeccCCCCC--cchhhhcChhhhhcCCCcCCCHHHHHHHH
Confidence 89999999999999988 59999999999999999998876543321 11111111111111244577999999999
Q ss_pred HHCCCeEEEEEecC-eEEEEEEe
Q 018740 325 RACGLVDFKCTRNR-GFVMFTAT 346 (351)
Q Consensus 325 ~~aGf~~v~~~~~g-~~~~~~a~ 346 (351)
+++||++++....+ ...++.++
T Consensus 324 ~~aGf~~~~~~~~~~~~~vie~~ 346 (348)
T 3lst_A 324 TAAGLRLDRVVGTSSVMSIAVGV 346 (348)
T ss_dssp HHTTEEEEEEEECSSSCEEEEEE
T ss_pred HHCCCceEEEEECCCCcEEEEEE
Confidence 99999999977644 34444444
No 84
>1fp1_D Isoliquiritigenin 2'-O-methyltransferase; protein-substrate, protein-product complex; HET: SAH HCC; 1.82A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpq_A*
Probab=99.78 E-value=5.8e-18 Score=159.98 Aligned_cols=166 Identities=17% Similarity=0.153 Sum_probs=123.0
Q ss_pred HHHhccC-CCCCCeEEEEcCccCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHhhhCCCCCCCeEEEEecCCCCCCCC
Q 018740 168 LMKGYLK-PVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLPFAS 246 (351)
Q Consensus 168 ~l~~~l~-~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~g~~~~~i~~~~~d~~~lp~~~ 246 (351)
.+...+. ..++.+|||||||+|.++..+++.++..+++++|+ +.+++.+++ .++++++.+|+.+ +++.
T Consensus 199 ~l~~~~~~~~~~~~vLDvG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~---------~~~v~~~~~d~~~-~~~~ 267 (372)
T 1fp1_D 199 RMLEIYTGFEGISTLVDVGGGSGRNLELIISKYPLIKGINFDL-PQVIENAPP---------LSGIEHVGGDMFA-SVPQ 267 (372)
T ss_dssp HHHHHCCTTTTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHTTCCC---------CTTEEEEECCTTT-CCCC
T ss_pred HHHHHhhccCCCCEEEEeCCCCcHHHHHHHHHCCCCeEEEeCh-HHHHHhhhh---------cCCCEEEeCCccc-CCCC
Confidence 4444443 44568999999999999999999998889999999 989887764 3679999999987 6554
Q ss_pred CceeeEEeccccccCCChH--HHHHHHHhcccCCcEEEEEeeccCCCCCcchH---HHHHHHHHhhccCCccCCCHHHHH
Q 018740 247 SSIDAVHAGAAIHCWSSPS--TGVAEISRVLRPGGVFVGTTYIVDGPFNLIPF---SRLLRQNMMQISGSYTFLSEREIE 321 (351)
Q Consensus 247 ~~fD~V~~~~vl~h~~d~~--~~l~~i~~~LkpgG~li~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~s~~~l~ 321 (351)
||+|++.+++||++|+. .+|++++++|+|||.+++.++..+.... .+. .............+...++.+++.
T Consensus 268 --~D~v~~~~~lh~~~d~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~-~~~~~~~~~~~d~~~~~~~~~~~~t~~e~~ 344 (372)
T 1fp1_D 268 --GDAMILKAVCHNWSDEKCIEFLSNCHKALSPNGKVIIVEFILPEEPN-TSEESKLVSTLDNLMFITVGGRERTEKQYE 344 (372)
T ss_dssp --EEEEEEESSGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEEECSSCC-SSHHHHHHHHHHHHHHHHHSCCCEEHHHHH
T ss_pred --CCEEEEecccccCCHHHHHHHHHHHHHhcCCCCEEEEEEeccCCCCc-cchHHHHHHHhhHHHHhccCCccCCHHHHH
Confidence 99999999999999988 9999999999999999998876543211 111 111111110001123456999999
Q ss_pred HHHHHCCCeEEEEEe--cCeEEEEEEec
Q 018740 322 DLCRACGLVDFKCTR--NRGFVMFTATK 347 (351)
Q Consensus 322 ~ll~~aGf~~v~~~~--~g~~~~~~a~k 347 (351)
++++++||++++... .+.+.++.++|
T Consensus 345 ~ll~~aGf~~~~~~~~~~~~~~vie~~~ 372 (372)
T 1fp1_D 345 KLSKLSGFSKFQVACRAFNSLGVMEFYK 372 (372)
T ss_dssp HHHHHTTCSEEEEEEEETTTEEEEEEEC
T ss_pred HHHHHCCCceEEEEEcCCCCeEEEEEeC
Confidence 999999999988655 34245555543
No 85
>3ofk_A Nodulation protein S; NODS, N-methyltransferase, SAH, SAM, NOD factor, fixation, symbiosis, alpha/beta structure; HET: SAH; 1.85A {Bradyrhizobium SP} PDB: 3ofj_A*
Probab=99.77 E-value=1.7e-18 Score=150.75 Aligned_cols=113 Identities=15% Similarity=0.237 Sum_probs=100.2
Q ss_pred HHHHhccCCCCCCeEEEEcCccCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHhhhCCCCCCCeEEEEecCCCCCCCC
Q 018740 167 ELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLPFAS 246 (351)
Q Consensus 167 ~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~g~~~~~i~~~~~d~~~lp~~~ 246 (351)
..+...+...++.+|||+|||+|.++..+++.+. +|+|+|+|+.+++.+++++... .++.++++|+.+++ ++
T Consensus 41 ~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~--~v~~vD~s~~~~~~a~~~~~~~-----~~~~~~~~d~~~~~-~~ 112 (216)
T 3ofk_A 41 QLLRLSLSSGAVSNGLEIGCAAGAFTEKLAPHCK--RLTVIDVMPRAIGRACQRTKRW-----SHISWAATDILQFS-TA 112 (216)
T ss_dssp HHHHHHTTTSSEEEEEEECCTTSHHHHHHGGGEE--EEEEEESCHHHHHHHHHHTTTC-----SSEEEEECCTTTCC-CS
T ss_pred HHHHHHcccCCCCcEEEEcCCCCHHHHHHHHcCC--EEEEEECCHHHHHHHHHhcccC-----CCeEEEEcchhhCC-CC
Confidence 4455566666778999999999999999999875 9999999999999999986654 58999999999988 67
Q ss_pred CceeeEEeccccccCCCh---HHHHHHHHhcccCCcEEEEEeec
Q 018740 247 SSIDAVHAGAAIHCWSSP---STGVAEISRVLRPGGVFVGTTYI 287 (351)
Q Consensus 247 ~~fD~V~~~~vl~h~~d~---~~~l~~i~~~LkpgG~li~~~~~ 287 (351)
++||+|++..+++|++++ ..+++++.++|+|||.+++.++.
T Consensus 113 ~~fD~v~~~~~l~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~ 156 (216)
T 3ofk_A 113 ELFDLIVVAEVLYYLEDMTQMRTAIDNMVKMLAPGGHLVFGSAR 156 (216)
T ss_dssp CCEEEEEEESCGGGSSSHHHHHHHHHHHHHTEEEEEEEEEEEEC
T ss_pred CCccEEEEccHHHhCCCHHHHHHHHHHHHHHcCCCCEEEEEecC
Confidence 899999999999999998 46799999999999999998875
No 86
>3p9c_A Caffeic acid O-methyltransferase; S-adenosylmethionine dependent O-methyltransferase; HET: SAH; 1.80A {Lolium perenne} PDB: 3p9i_A* 3p9k_A*
Probab=99.77 E-value=2e-17 Score=155.81 Aligned_cols=168 Identities=19% Similarity=0.125 Sum_probs=123.8
Q ss_pred HHHHhccC-CCCCCeEEEEcCccCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHhhhCCCCCCCeEEEEecCCCCCCC
Q 018740 167 ELMKGYLK-PVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLPFA 245 (351)
Q Consensus 167 ~~l~~~l~-~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~g~~~~~i~~~~~d~~~lp~~ 245 (351)
..+...+. ..+..+|||||||+|.++..+++..|..+++++|+ +.+++.+++ .++++++.+|+.+ |++
T Consensus 190 ~~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~---------~~~v~~~~~D~~~-~~p 258 (364)
T 3p9c_A 190 KKLLELYHGFEGLGTLVDVGGGVGATVAAIAAHYPTIKGVNFDL-PHVISEAPQ---------FPGVTHVGGDMFK-EVP 258 (364)
T ss_dssp HHHHHHCCTTTTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHTTCCC---------CTTEEEEECCTTT-CCC
T ss_pred HHHHHhcccccCCCEEEEeCCCCCHHHHHHHHHCCCCeEEEecC-HHHHHhhhh---------cCCeEEEeCCcCC-CCC
Confidence 34444444 55678999999999999999999998889999999 888877654 4789999999987 766
Q ss_pred CCceeeEEeccccccCCChH--HHHHHHHhcccCCcEEEEEeeccCCCCCcchHH---HHHHHHHhhccCCccCCCHHHH
Q 018740 246 SSSIDAVHAGAAIHCWSSPS--TGVAEISRVLRPGGVFVGTTYIVDGPFNLIPFS---RLLRQNMMQISGSYTFLSEREI 320 (351)
Q Consensus 246 ~~~fD~V~~~~vl~h~~d~~--~~l~~i~~~LkpgG~li~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~s~~~l 320 (351)
.+ |+|++.+++||+++.. .+|++++++|+|||++++.+...+......... ......+.........++.+++
T Consensus 259 ~~--D~v~~~~vlh~~~d~~~~~~L~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~d~~m~~~~~~g~~rt~~e~ 336 (364)
T 3p9c_A 259 SG--DTILMKWILHDWSDQHCATLLKNCYDALPAHGKVVLVQCILPVNPEANPSSQGVFHVDMIMLAHNPGGRERYEREF 336 (364)
T ss_dssp CC--SEEEEESCGGGSCHHHHHHHHHHHHHHSCTTCEEEEEECCBCSSCCSSHHHHHHHHHHHHHHHHCSSCCCCBHHHH
T ss_pred CC--CEEEehHHhccCCHHHHHHHHHHHHHHcCCCCEEEEEEeccCCCCCcchhhhhHHHhHHHHHhcccCCccCCHHHH
Confidence 54 9999999999998764 889999999999999999888764322111111 1111111111224456799999
Q ss_pred HHHHHHCCCeEEEEEe-cCeEEEEEEec
Q 018740 321 EDLCRACGLVDFKCTR-NRGFVMFTATK 347 (351)
Q Consensus 321 ~~ll~~aGf~~v~~~~-~g~~~~~~a~k 347 (351)
.++++++||++++... .+...++.+.|
T Consensus 337 ~~ll~~AGF~~v~~~~~~~~~~vie~~k 364 (364)
T 3p9c_A 337 QALARGAGFTGVKSTYIYANAWAIEFTK 364 (364)
T ss_dssp HHHHHHTTCCEEEEEEEETTEEEEEEEC
T ss_pred HHHHHHCCCceEEEEEcCCceEEEEEeC
Confidence 9999999999998654 34444444443
No 87
>1ri5_A MRNA capping enzyme; methyltransferase, M7G, messenger RNA CAP, structural genomics, PSI, protein structure initiative; 2.10A {Encephalitozoon cuniculi} SCOP: c.66.1.34 PDB: 1ri2_A* 1ri3_A* 1ri1_A* 1ri4_A 1z3c_A* 2hv9_A*
Probab=99.77 E-value=4.2e-18 Score=155.40 Aligned_cols=152 Identities=18% Similarity=0.206 Sum_probs=118.0
Q ss_pred CCCCeEEEEcCccCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHhhhCCCCCCCeEEEEecCCCCCC-CCCceeeEEe
Q 018740 176 VLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLPF-ASSSIDAVHA 254 (351)
Q Consensus 176 ~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~g~~~~~i~~~~~d~~~lp~-~~~~fD~V~~ 254 (351)
.++.+|||||||+|.++..+++.+ ..+|+|+|+|+.+++.|++++... +. ..++.++++|+.++++ ++++||+|++
T Consensus 63 ~~~~~vLDiGcG~G~~~~~l~~~~-~~~v~gvD~s~~~~~~a~~~~~~~-~~-~~~v~~~~~d~~~~~~~~~~~fD~v~~ 139 (298)
T 1ri5_A 63 KRGDSVLDLGCGKGGDLLKYERAG-IGEYYGVDIAEVSINDARVRARNM-KR-RFKVFFRAQDSYGRHMDLGKEFDVISS 139 (298)
T ss_dssp CTTCEEEEETCTTTTTHHHHHHHT-CSEEEEEESCHHHHHHHHHHHHTS-CC-SSEEEEEESCTTTSCCCCSSCEEEEEE
T ss_pred CCCCeEEEECCCCCHHHHHHHHCC-CCEEEEEECCHHHHHHHHHHHHhc-CC-CccEEEEECCccccccCCCCCcCEEEE
Confidence 357899999999999999888875 458999999999999999988765 11 2479999999999887 5789999999
Q ss_pred cccccc----CCChHHHHHHHHhcccCCcEEEEEeeccCCCCCcchHHHHHHHH------------------------H-
Q 018740 255 GAAIHC----WSSPSTGVAEISRVLRPGGVFVGTTYIVDGPFNLIPFSRLLRQN------------------------M- 305 (351)
Q Consensus 255 ~~vl~h----~~d~~~~l~~i~~~LkpgG~li~~~~~~~~~~~~~~~~~~~~~~------------------------~- 305 (351)
..++|| ..++..+|+++.++|+|||.+++.+++.+. ....+... +
T Consensus 140 ~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 213 (298)
T 1ri5_A 140 QFSFHYAFSTSESLDIAQRNIARHLRPGGYFIMTVPSRDV------ILERYKQGRMSNDFYKIELEKMEDVPMESVREYR 213 (298)
T ss_dssp ESCGGGGGSSHHHHHHHHHHHHHTEEEEEEEEEEEECHHH------HHHHHHHTCCBCSSEEEECCCCSSCCTTTCCEEE
T ss_pred CchhhhhcCCHHHHHHHHHHHHHhcCCCCEEEEEECCHHH------HHHHHccCccCCeeEEEEeCccccccccccceEE
Confidence 999987 456779999999999999999999887421 10000000 0
Q ss_pred ---hh--ccCCccCCCHHHHHHHHHHCCCeEEEEEe
Q 018740 306 ---MQ--ISGSYTFLSEREIEDLCRACGLVDFKCTR 336 (351)
Q Consensus 306 ---~~--~~~~~~~~s~~~l~~ll~~aGf~~v~~~~ 336 (351)
.. ...+..+++.+++.++++++||++++...
T Consensus 214 ~~l~~~~~~~~~~~~~~~~l~~ll~~aGf~~v~~~~ 249 (298)
T 1ri5_A 214 FTLLDSVNNCIEYFVDFTRMVDGFKRLGLSLVERKG 249 (298)
T ss_dssp EEETTSCSSEEEECCCHHHHHHHHHTTTEEEEEEEE
T ss_pred EEEchhhcCCcccccCHHHHHHHHHHcCCEEEEecC
Confidence 00 01123578999999999999999988543
No 88
>3e05_A Precorrin-6Y C5,15-methyltransferase (decarboxyla; porphyrin metabolism, S-adenosyl-methionine; 1.80A {Geobacter metallireducens} SCOP: c.66.1.0
Probab=99.77 E-value=2.4e-17 Score=142.33 Aligned_cols=135 Identities=16% Similarity=0.057 Sum_probs=113.4
Q ss_pred HHHHHHHHhccCCCCCCeEEEEcCccCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHhhhCCCCCCCeEEEEecCCCC
Q 018740 163 EKEFELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRL 242 (351)
Q Consensus 163 ~~~~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~g~~~~~i~~~~~d~~~l 242 (351)
......+...+...++.+|||+|||+|.++..+++.++..+|+|+|+|+.+++.+++++... + ..+++++.+|+.+.
T Consensus 26 ~~i~~~~l~~l~~~~~~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~-~--~~~v~~~~~d~~~~ 102 (204)
T 3e05_A 26 QEVRAVTLSKLRLQDDLVMWDIGAGSASVSIEASNLMPNGRIFALERNPQYLGFIRDNLKKF-V--ARNVTLVEAFAPEG 102 (204)
T ss_dssp HHHHHHHHHHTTCCTTCEEEEETCTTCHHHHHHHHHCTTSEEEEEECCHHHHHHHHHHHHHH-T--CTTEEEEECCTTTT
T ss_pred HHHHHHHHHHcCCCCCCEEEEECCCCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHh-C--CCcEEEEeCChhhh
Confidence 44445667777777889999999999999999999987779999999999999999998876 2 37899999999665
Q ss_pred CCCCCceeeEEeccccccCCChHHHHHHHHhcccCCcEEEEEeeccCCCCCcchHHHHHHHHHhhccCCccCCCHHHHHH
Q 018740 243 PFASSSIDAVHAGAAIHCWSSPSTGVAEISRVLRPGGVFVGTTYIVDGPFNLIPFSRLLRQNMMQISGSYTFLSEREIED 322 (351)
Q Consensus 243 p~~~~~fD~V~~~~vl~h~~d~~~~l~~i~~~LkpgG~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~~ 322 (351)
....++||+|++..+++ ++..+++++.++|+|||++++.....+ +.+++.+
T Consensus 103 ~~~~~~~D~i~~~~~~~---~~~~~l~~~~~~LkpgG~l~~~~~~~~--------------------------~~~~~~~ 153 (204)
T 3e05_A 103 LDDLPDPDRVFIGGSGG---MLEEIIDAVDRRLKSEGVIVLNAVTLD--------------------------TLTKAVE 153 (204)
T ss_dssp CTTSCCCSEEEESCCTT---CHHHHHHHHHHHCCTTCEEEEEECBHH--------------------------HHHHHHH
T ss_pred hhcCCCCCEEEECCCCc---CHHHHHHHHHHhcCCCeEEEEEecccc--------------------------cHHHHHH
Confidence 43447899999988775 788999999999999999999765421 3457888
Q ss_pred HHHHCCC
Q 018740 323 LCRACGL 329 (351)
Q Consensus 323 ll~~aGf 329 (351)
+++++||
T Consensus 154 ~l~~~g~ 160 (204)
T 3e05_A 154 FLEDHGY 160 (204)
T ss_dssp HHHHTTC
T ss_pred HHHHCCC
Confidence 9999998
No 89
>1fbn_A MJ fibrillarin homologue; MJ proteins, ribosomal RNA processing, snoRNP, structural genomics, BSGC structure funded by NIH; 1.60A {Methanocaldococcus jannaschii} SCOP: c.66.1.3 PDB: 1g8s_A
Probab=99.76 E-value=3.7e-17 Score=144.03 Aligned_cols=152 Identities=13% Similarity=0.119 Sum_probs=114.3
Q ss_pred HhccCCCCCCeEEEEcCccCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHhhhCCCCCCCeEEEEecCCC----CCCC
Q 018740 170 KGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISR----LPFA 245 (351)
Q Consensus 170 ~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~g~~~~~i~~~~~d~~~----lp~~ 245 (351)
...+...++.+|||+|||+|.++..+++..+..+|+|+|+|+.+++.+++++... .++.++.+|+.. +++.
T Consensus 67 l~~~~~~~~~~VLDlGcG~G~~~~~la~~~~~~~v~gvD~s~~~~~~a~~~~~~~-----~~v~~~~~d~~~~~~~~~~~ 141 (230)
T 1fbn_A 67 LKVMPIKRDSKILYLGASAGTTPSHVADIADKGIVYAIEYAPRIMRELLDACAER-----ENIIPILGDANKPQEYANIV 141 (230)
T ss_dssp CCCCCCCTTCEEEEESCCSSHHHHHHHHHTTTSEEEEEESCHHHHHHHHHHTTTC-----TTEEEEECCTTCGGGGTTTS
T ss_pred ccccCCCCCCEEEEEcccCCHHHHHHHHHcCCcEEEEEECCHHHHHHHHHHhhcC-----CCeEEEECCCCCcccccccC
Confidence 4445556788999999999999999999854569999999999999999886543 789999999988 6766
Q ss_pred CCceeeEEeccccccCCCh---HHHHHHHHhcccCCcEEEEEeeccCCCCCcchHHHHHHHHHhhccCCccCCCHHHHHH
Q 018740 246 SSSIDAVHAGAAIHCWSSP---STGVAEISRVLRPGGVFVGTTYIVDGPFNLIPFSRLLRQNMMQISGSYTFLSEREIED 322 (351)
Q Consensus 246 ~~~fD~V~~~~vl~h~~d~---~~~l~~i~~~LkpgG~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~~ 322 (351)
++||+|+ ++++++ ..+++++.++|+|||.+++...... .....+. . .+..+++.
T Consensus 142 -~~~D~v~-----~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~-~~~~~~~-~--------------~~~~~~l~- 198 (230)
T 1fbn_A 142 -EKVDVIY-----EDVAQPNQAEILIKNAKWFLKKGGYGMIAIKARS-IDVTKDP-K--------------EIFKEQKE- 198 (230)
T ss_dssp -CCEEEEE-----ECCCSTTHHHHHHHHHHHHEEEEEEEEEEEEGGG-TCSSSCH-H--------------HHHHHHHH-
T ss_pred -ccEEEEE-----EecCChhHHHHHHHHHHHhCCCCcEEEEEEecCC-CCCCCCH-H--------------HhhHHHHH-
Confidence 7899999 566777 7889999999999999999732211 1111111 0 11236777
Q ss_pred HHHHCCCeEEEEEecCe----EEEEEEecCC
Q 018740 323 LCRACGLVDFKCTRNRG----FVMFTATKPS 349 (351)
Q Consensus 323 ll~~aGf~~v~~~~~g~----~~~~~a~kp~ 349 (351)
+|+++||++++...... +.+++++|+.
T Consensus 199 ~l~~~Gf~~~~~~~~~~~~~~~~~v~~~k~~ 229 (230)
T 1fbn_A 199 ILEAGGFKIVDEVDIEPFEKDHVMFVGIWEG 229 (230)
T ss_dssp HHHHHTEEEEEEEECTTTSTTEEEEEEEECC
T ss_pred HHHHCCCEEEEEEccCCCccceEEEEEEeCC
Confidence 89999999888665433 5777777754
No 90
>2vdw_A Vaccinia virus capping enzyme D1 subunit; nucleotidyltransferase, S-adenosyl-L-methionine, RNA metabolism, mRNA processing, methyltransferase, poxvirus; HET: SAH; 2.70A {Vaccinia virus}
Probab=99.75 E-value=1.1e-18 Score=160.17 Aligned_cols=159 Identities=18% Similarity=0.142 Sum_probs=109.9
Q ss_pred CCCeEEEEcCccCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHhhhCCCC----CCCeEEEEecC------CCC--CC
Q 018740 177 LGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFP----KENFLLVRADI------SRL--PF 244 (351)
Q Consensus 177 ~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~g~~----~~~i~~~~~d~------~~l--p~ 244 (351)
++.+|||||||+|..+..++..+ ..+|+|+|+|+.|++.|+++.... +.. ..++.+.+.|+ .++ ++
T Consensus 48 ~~~~VLDlGCG~G~~l~~~~~~~-~~~v~GiD~S~~~l~~A~~~~~~~-~~~~~~~~~~~~f~~~d~~~d~~~~~l~~~~ 125 (302)
T 2vdw_A 48 NKRKVLAIDFGNGADLEKYFYGE-IALLVATDPDADAIARGNERYNKL-NSGIKTKYYKFDYIQETIRSDTFVSSVREVF 125 (302)
T ss_dssp SCCEEEETTCTTTTTHHHHHHTT-CSEEEEEESCHHHHHHHHHHHHHH-CC----CCCEEEEEECCTTSSSHHHHHHTTC
T ss_pred CCCeEEEEecCCcHhHHHHHhcC-CCeEEEEECCHHHHHHHHHHHHhc-cccccccccccchhhhhcccchhhhhhhccc
Confidence 46799999999998666565554 348999999999999999988765 110 01367888887 322 34
Q ss_pred CCCceeeEEeccccccC---CChHHHHHHHHhcccCCcEEEEEeeccCCCCCcc-----------hHHHHH---H-----
Q 018740 245 ASSSIDAVHAGAAIHCW---SSPSTGVAEISRVLRPGGVFVGTTYIVDGPFNLI-----------PFSRLL---R----- 302 (351)
Q Consensus 245 ~~~~fD~V~~~~vl~h~---~d~~~~l~~i~~~LkpgG~li~~~~~~~~~~~~~-----------~~~~~~---~----- 302 (351)
++++||+|+|..++||+ .+...+|++++++|||||++++.+++.+...... .....+ .
T Consensus 126 ~~~~FD~V~~~~~lhy~~~~~~~~~~l~~~~r~LkpGG~~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 205 (302)
T 2vdw_A 126 YFGKFNIIDWQFAIHYSFHPRHYATVMNNLSELTASGGKVLITTMDGDKLSKLTDKKTFIIHKNLPSSENYMSVEKIADD 205 (302)
T ss_dssp CSSCEEEEEEESCGGGTCSTTTHHHHHHHHHHHEEEEEEEEEEEECHHHHTTCCSCEEEECCSSSCTTTSEEEECEEETT
T ss_pred cCCCeeEEEECchHHHhCCHHHHHHHHHHHHHHcCCCCEEEEEeCCHHHHHHHHhcCCcccccccccccceeeecccccc
Confidence 57899999999999886 3557999999999999999999998643211000 000000 0
Q ss_pred H--HH-hhc-cC--CccCCCHHHHHHHHHHCCCeEEEEEec
Q 018740 303 Q--NM-MQI-SG--SYTFLSEREIEDLCRACGLVDFKCTRN 337 (351)
Q Consensus 303 ~--~~-~~~-~~--~~~~~s~~~l~~ll~~aGf~~v~~~~~ 337 (351)
. .+ ... .. ...+.+.+++.++++++||++++....
T Consensus 206 ~~~~~~~~~~~~~~~e~~v~~~el~~l~~~~Gl~lv~~~~f 246 (302)
T 2vdw_A 206 RIVVYNPSTMSTPMTEYIIKKNDIVRVFNEYGFVLVDNVDF 246 (302)
T ss_dssp EEEEBCTTTBSSCEEEECCCHHHHHHHHHHTTEEEEEEEEH
T ss_pred ccceeeccccCCCceeeeeEHHHHHHHHHHCCCEEEEecCh
Confidence 0 00 000 00 123677899999999999999886543
No 91
>3ggd_A SAM-dependent methyltransferase; YP_325210.1, structural GEN joint center for structural genomics, JCSG; HET: SAH; 2.11A {Anabaena variabilis atcc 29413}
Probab=99.75 E-value=6.5e-18 Score=150.04 Aligned_cols=146 Identities=15% Similarity=0.047 Sum_probs=113.7
Q ss_pred CCCCCeEEEEcCccCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHhhhCCCCCCCeEEEEecCCCCCCCC-----Cce
Q 018740 175 PVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLPFAS-----SSI 249 (351)
Q Consensus 175 ~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~g~~~~~i~~~~~d~~~lp~~~-----~~f 249 (351)
..++.+|||+|||+|.++..+++.++ +|+|+|+|+.+++.+++++. ..++.++++|+.+++... ..|
T Consensus 54 ~~~~~~vLD~GcG~G~~~~~la~~~~--~v~gvD~s~~~~~~a~~~~~------~~~~~~~~~d~~~~~~~~~~~~~~~~ 125 (245)
T 3ggd_A 54 FNPELPLIDFACGNGTQTKFLSQFFP--RVIGLDVSKSALEIAAKENT------AANISYRLLDGLVPEQAAQIHSEIGD 125 (245)
T ss_dssp SCTTSCEEEETCTTSHHHHHHHHHSS--CEEEEESCHHHHHHHHHHSC------CTTEEEEECCTTCHHHHHHHHHHHCS
T ss_pred cCCCCeEEEEcCCCCHHHHHHHHhCC--CEEEEECCHHHHHHHHHhCc------ccCceEEECcccccccccccccccCc
Confidence 34577999999999999999999987 99999999999999998752 358999999998865432 249
Q ss_pred eeEEeccccccCC--ChHHHHHHHHhcccCCcEEEEEeeccCCCCCcchHHHHHHHH----------HhhccCCccCCCH
Q 018740 250 DAVHAGAAIHCWS--SPSTGVAEISRVLRPGGVFVGTTYIVDGPFNLIPFSRLLRQN----------MMQISGSYTFLSE 317 (351)
Q Consensus 250 D~V~~~~vl~h~~--d~~~~l~~i~~~LkpgG~li~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~s~ 317 (351)
|+|++..++||++ ++..+++++.++|||||++++.++.... ..++..+... ..........++.
T Consensus 126 d~v~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 201 (245)
T 3ggd_A 126 ANIYMRTGFHHIPVEKRELLGQSLRILLGKQGAMYLIELGTGC----IDFFNSLLEKYGQLPYELLLVMEHGIRPGIFTA 201 (245)
T ss_dssp CEEEEESSSTTSCGGGHHHHHHHHHHHHTTTCEEEEEEECTTH----HHHHHHHHHHHSSCCHHHHHHHTTTCCCCCCCH
T ss_pred cEEEEcchhhcCCHHHHHHHHHHHHHHcCCCCEEEEEeCCccc----cHHHHHHHhCCCCCchhhhhccccCCCCCccCH
Confidence 9999999999998 7889999999999999999998876431 1122111111 1111112235799
Q ss_pred HHHHHHHHHCCCeEEEE
Q 018740 318 REIEDLCRACGLVDFKC 334 (351)
Q Consensus 318 ~~l~~ll~~aGf~~v~~ 334 (351)
+++.+++ +||++++.
T Consensus 202 ~~~~~~~--aGf~~~~~ 216 (245)
T 3ggd_A 202 EDIELYF--PDFEILSQ 216 (245)
T ss_dssp HHHHHHC--TTEEEEEE
T ss_pred HHHHHHh--CCCEEEec
Confidence 9999999 99999874
No 92
>3grz_A L11 mtase, ribosomal protein L11 methyltransferase; methylase, SAM-binding domain, PSI-2, nysgxrc; 2.00A {Lactobacillus delbrueckii subsp}
Probab=99.75 E-value=2.8e-17 Score=142.03 Aligned_cols=139 Identities=15% Similarity=0.077 Sum_probs=112.7
Q ss_pred CCCCeEEEEcCccCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHhhhCCCCCCCeEEEEecCCCCCCCCCceeeEEec
Q 018740 176 VLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLPFASSSIDAVHAG 255 (351)
Q Consensus 176 ~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~g~~~~~i~~~~~d~~~lp~~~~~fD~V~~~ 255 (351)
.++.+|||+|||+|.++..+++.+ ..+|+|+|+|+.+++.|++++... + ..++.++.+|+.+.+ +++||+|+++
T Consensus 59 ~~~~~vLDiG~G~G~~~~~l~~~~-~~~v~~vD~s~~~~~~a~~~~~~~-~--~~~v~~~~~d~~~~~--~~~fD~i~~~ 132 (205)
T 3grz_A 59 VKPLTVADVGTGSGILAIAAHKLG-AKSVLATDISDESMTAAEENAALN-G--IYDIALQKTSLLADV--DGKFDLIVAN 132 (205)
T ss_dssp SSCCEEEEETCTTSHHHHHHHHTT-CSEEEEEESCHHHHHHHHHHHHHT-T--CCCCEEEESSTTTTC--CSCEEEEEEE
T ss_pred cCCCEEEEECCCCCHHHHHHHHCC-CCEEEEEECCHHHHHHHHHHHHHc-C--CCceEEEeccccccC--CCCceEEEEC
Confidence 357899999999999999988864 459999999999999999998876 2 344999999997754 5889999999
Q ss_pred cccccCCChHHHHHHHHhcccCCcEEEEEeeccCCCCCcchHHHHHHHHHhhccCCccCCCHHHHHHHHHHCCCeEEEEE
Q 018740 256 AAIHCWSSPSTGVAEISRVLRPGGVFVGTTYIVDGPFNLIPFSRLLRQNMMQISGSYTFLSEREIEDLCRACGLVDFKCT 335 (351)
Q Consensus 256 ~vl~h~~d~~~~l~~i~~~LkpgG~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~~ll~~aGf~~v~~~ 335 (351)
..++++ ..+++++.++|+|||.+++.++... +.+++.++++++||++++..
T Consensus 133 ~~~~~~---~~~l~~~~~~L~~gG~l~~~~~~~~--------------------------~~~~~~~~~~~~Gf~~~~~~ 183 (205)
T 3grz_A 133 ILAEIL---LDLIPQLDSHLNEDGQVIFSGIDYL--------------------------QLPKIEQALAENSFQIDLKM 183 (205)
T ss_dssp SCHHHH---HHHGGGSGGGEEEEEEEEEEEEEGG--------------------------GHHHHHHHHHHTTEEEEEEE
T ss_pred CcHHHH---HHHHHHHHHhcCCCCEEEEEecCcc--------------------------cHHHHHHHHHHcCCceEEee
Confidence 888764 7889999999999999999766532 45688999999999999876
Q ss_pred ecCeE-EEEEEecCC
Q 018740 336 RNRGF-VMFTATKPS 349 (351)
Q Consensus 336 ~~g~~-~~~~a~kp~ 349 (351)
..+.| .++..++|.
T Consensus 184 ~~~~w~~~~~~~~~~ 198 (205)
T 3grz_A 184 RAGRWIGLAISRKHE 198 (205)
T ss_dssp EETTEEEEEEEECC-
T ss_pred ccCCEEEEEEecccc
Confidence 65555 444445443
No 93
>1fp2_A Isoflavone O-methyltransferase; protein-product complex; HET: SAH HMO; 1.40A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpx_A* 2qyo_A*
Probab=99.75 E-value=2.8e-17 Score=154.05 Aligned_cols=157 Identities=15% Similarity=0.152 Sum_probs=118.5
Q ss_pred CCCCeEEEEcCccCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHhhhCCCCCCCeEEEEecCCCCCCCCCceeeEEec
Q 018740 176 VLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLPFASSSIDAVHAG 255 (351)
Q Consensus 176 ~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~g~~~~~i~~~~~d~~~lp~~~~~fD~V~~~ 255 (351)
.+..+|||||||+|.++..+++.++..+++++|+ +.+++.+++ .++++++.+|+.+ +++ .||+|++.
T Consensus 187 ~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~---------~~~v~~~~~d~~~-~~p--~~D~v~~~ 253 (352)
T 1fp2_A 187 DGLESIVDVGGGTGTTAKIICETFPKLKCIVFDR-PQVVENLSG---------SNNLTYVGGDMFT-SIP--NADAVLLK 253 (352)
T ss_dssp TTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHTTCCC---------BTTEEEEECCTTT-CCC--CCSEEEEE
T ss_pred ccCceEEEeCCCccHHHHHHHHHCCCCeEEEeeC-HHHHhhccc---------CCCcEEEeccccC-CCC--CccEEEee
Confidence 3467999999999999999999988789999999 999887764 2569999999976 554 39999999
Q ss_pred cccccCCChH--HHHHHHHhcccC---CcEEEEEeeccCCCCCcc--hHHHHHHHHHhhccCCccCCCHHHHHHHHHHCC
Q 018740 256 AAIHCWSSPS--TGVAEISRVLRP---GGVFVGTTYIVDGPFNLI--PFSRLLRQNMMQISGSYTFLSEREIEDLCRACG 328 (351)
Q Consensus 256 ~vl~h~~d~~--~~l~~i~~~Lkp---gG~li~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~s~~~l~~ll~~aG 328 (351)
+++||++|+. .+|++++++||| ||++++.++..+...... .............. ....++.+++.++++++|
T Consensus 254 ~~lh~~~d~~~~~~l~~~~~~L~p~~~gG~l~i~e~~~~~~~~~~~~~~~~~~~d~~~~~~-~g~~~t~~e~~~ll~~aG 332 (352)
T 1fp2_A 254 YILHNWTDKDCLRILKKCKEAVTNDGKRGKVTIIDMVIDKKKDENQVTQIKLLMDVNMACL-NGKERNEEEWKKLFIEAG 332 (352)
T ss_dssp SCGGGSCHHHHHHHHHHHHHHHSGGGCCCEEEEEECEECTTTSCHHHHHHHHHHHHHGGGG-TCCCEEHHHHHHHHHHTT
T ss_pred hhhccCCHHHHHHHHHHHHHhCCCCCCCcEEEEEEeecCCCCCccchhhhHhhccHHHHhc-cCCCCCHHHHHHHHHHCC
Confidence 9999999988 999999999999 999999988764322110 11111111111111 134568999999999999
Q ss_pred CeEEEEEe-cCeEEEEEEe
Q 018740 329 LVDFKCTR-NRGFVMFTAT 346 (351)
Q Consensus 329 f~~v~~~~-~g~~~~~~a~ 346 (351)
|++++... .+...++.++
T Consensus 333 f~~~~~~~~~~~~~vie~~ 351 (352)
T 1fp2_A 333 FQHYKISPLTGFLSLIEIY 351 (352)
T ss_dssp CCEEEEEEEETTEEEEEEE
T ss_pred CCeeEEEecCCCcEEEEEe
Confidence 99988654 3444555554
No 94
>3htx_A HEN1; HEN1, small RNA methyltransferase, protein-RNA complex; HET: SAH; 3.10A {Arabidopsis thaliana}
Probab=99.74 E-value=1.1e-17 Score=167.36 Aligned_cols=164 Identities=10% Similarity=0.075 Sum_probs=124.7
Q ss_pred HHHHHHhccCCCCCCeEEEEcCccCHHHHHHHHhC-CCCeEEEEeCCHHHHHHHHHHHhhhCC---CCCCCeEEEEecCC
Q 018740 165 EFELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSG-LFSLVVALDYSENMLKQCYEFVQQESN---FPKENFLLVRADIS 240 (351)
Q Consensus 165 ~~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~-~~~~v~gvD~s~~~~~~a~~~~~~~~g---~~~~~i~~~~~d~~ 240 (351)
..+.+...+...++.+|||||||+|.++..+++.+ +..+|+|+|+|+.|++.|++++....+ ....++.++++|+.
T Consensus 709 Rle~LLelL~~~~g~rVLDVGCGTG~lai~LAr~g~p~a~VtGVDIS~emLe~AReRLa~~lnAkr~gl~nVefiqGDa~ 788 (950)
T 3htx_A 709 RVEYALKHIRESSASTLVDFGCGSGSLLDSLLDYPTSLQTIIGVDISPKGLARAAKMLHVKLNKEACNVKSATLYDGSIL 788 (950)
T ss_dssp HHHHHHHHHHHSCCSEEEEETCSSSHHHHHHTSSCCCCCEEEEEESCHHHHHHHHHHHHHHTTTTCSSCSEEEEEESCTT
T ss_pred HHHHHHHHhcccCCCEEEEECCCCCHHHHHHHHhCCCCCeEEEEECCHHHHHHHHHHhhhccchhhcCCCceEEEECchH
Confidence 34556666655578899999999999999999987 445999999999999999987654211 12468999999999
Q ss_pred CCCCCCCceeeEEeccccccCCChH--HHHHHHHhcccCCcEEEEEeeccCCCCCcchHHHHH--------HH----HHh
Q 018740 241 RLPFASSSIDAVHAGAAIHCWSSPS--TGVAEISRVLRPGGVFVGTTYIVDGPFNLIPFSRLL--------RQ----NMM 306 (351)
Q Consensus 241 ~lp~~~~~fD~V~~~~vl~h~~d~~--~~l~~i~~~LkpgG~li~~~~~~~~~~~~~~~~~~~--------~~----~~~ 306 (351)
++++.+++||+|++..+++|++++. .+++++.++|||| .+++.+++.+.. ..+..+ .. ...
T Consensus 789 dLp~~d~sFDlVV~~eVLeHL~dp~l~~~L~eI~RvLKPG-~LIISTPN~eyN----~lF~~Lnp~tr~~dPd~~~~~~f 863 (950)
T 3htx_A 789 EFDSRLHDVDIGTCLEVIEHMEEDQACEFGEKVLSLFHPK-LLIVSTPNYEFN----TILQRSTPETQEENNSEPQLPKF 863 (950)
T ss_dssp SCCTTSCSCCEEEEESCGGGSCHHHHHHHHHHHHHTTCCS-EEEEEECBGGGH----HHHTCC------------CCSSC
T ss_pred hCCcccCCeeEEEEeCchhhCChHHHHHHHHHHHHHcCCC-EEEEEecCchhh----hhhhhcccccccccccccccccc
Confidence 9999889999999999999999876 5899999999999 999998876321 111000 00 011
Q ss_pred hccCCccCCCHHHHHH----HHHHCCCeEEE
Q 018740 307 QISGSYTFLSEREIED----LCRACGLVDFK 333 (351)
Q Consensus 307 ~~~~~~~~~s~~~l~~----ll~~aGf~~v~ 333 (351)
....|...|+.++++. ++++.||.+.-
T Consensus 864 Rh~DHrFEWTReEFr~Wae~LAer~GYsVef 894 (950)
T 3htx_A 864 RNHDHKFEWTREQFNQWASKLGKRHNYSVEF 894 (950)
T ss_dssp SCSSCSCCBCHHHHHHHHHHHHHHTTEEEEE
T ss_pred cccCcceeecHHHHHHHHHHHHHhcCcEEEE
Confidence 2334556688888887 77788997644
No 95
>3njr_A Precorrin-6Y methylase; methyltransferase, decarboxylase, transferase; HET: SAH PG4; 2.70A {Rhodobacter capsulatus}
Probab=99.73 E-value=3.4e-16 Score=135.41 Aligned_cols=134 Identities=17% Similarity=0.150 Sum_probs=108.2
Q ss_pred HHHHHHHhccCCCCCCeEEEEcCccCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHhhhCCCCCC-CeEEEEecCCCC
Q 018740 164 KEFELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKE-NFLLVRADISRL 242 (351)
Q Consensus 164 ~~~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~g~~~~-~i~~~~~d~~~l 242 (351)
.....+...+...++.+|||+|||+|.++..+++.+ .+|+|+|+|+.+++.|++++... | .. ++.++.+|+.+.
T Consensus 42 ~~~~~~l~~l~~~~~~~vLDlGcG~G~~~~~la~~~--~~v~~vD~s~~~~~~a~~~~~~~-g--~~~~v~~~~~d~~~~ 116 (204)
T 3njr_A 42 PMRALTLAALAPRRGELLWDIGGGSGSVSVEWCLAG--GRAITIEPRADRIENIQKNIDTY-G--LSPRMRAVQGTAPAA 116 (204)
T ss_dssp HHHHHHHHHHCCCTTCEEEEETCTTCHHHHHHHHTT--CEEEEEESCHHHHHHHHHHHHHT-T--CTTTEEEEESCTTGG
T ss_pred HHHHHHHHhcCCCCCCEEEEecCCCCHHHHHHHHcC--CEEEEEeCCHHHHHHHHHHHHHc-C--CCCCEEEEeCchhhh
Confidence 334456667777778899999999999999999984 49999999999999999998776 2 34 899999999884
Q ss_pred CCCCCceeeEEeccccccCCChHHHHHHHHhcccCCcEEEEEeeccCCCCCcchHHHHHHHHHhhccCCccCCCHHHHHH
Q 018740 243 PFASSSIDAVHAGAAIHCWSSPSTGVAEISRVLRPGGVFVGTTYIVDGPFNLIPFSRLLRQNMMQISGSYTFLSEREIED 322 (351)
Q Consensus 243 p~~~~~fD~V~~~~vl~h~~d~~~~l~~i~~~LkpgG~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~~ 322 (351)
......||+|++...+ ++. +++++.++|+|||++++.....+ +..++.+
T Consensus 117 ~~~~~~~D~v~~~~~~----~~~-~l~~~~~~LkpgG~lv~~~~~~~--------------------------~~~~~~~ 165 (204)
T 3njr_A 117 LADLPLPEAVFIGGGG----SQA-LYDRLWEWLAPGTRIVANAVTLE--------------------------SETLLTQ 165 (204)
T ss_dssp GTTSCCCSEEEECSCC----CHH-HHHHHHHHSCTTCEEEEEECSHH--------------------------HHHHHHH
T ss_pred cccCCCCCEEEECCcc----cHH-HHHHHHHhcCCCcEEEEEecCcc--------------------------cHHHHHH
Confidence 3334579999987754 566 99999999999999999766421 2456778
Q ss_pred HHHHCCCeEEE
Q 018740 323 LCRACGLVDFK 333 (351)
Q Consensus 323 ll~~aGf~~v~ 333 (351)
++++.|+++..
T Consensus 166 ~l~~~g~~i~~ 176 (204)
T 3njr_A 166 LHARHGGQLLR 176 (204)
T ss_dssp HHHHHCSEEEE
T ss_pred HHHhCCCcEEE
Confidence 88899988766
No 96
>3orh_A Guanidinoacetate N-methyltransferase; structura genomics, structural genomics consortium, SGC; HET: SAH; 1.86A {Homo sapiens} PDB: 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=99.73 E-value=2e-18 Score=152.89 Aligned_cols=111 Identities=9% Similarity=0.197 Sum_probs=93.0
Q ss_pred HHHhccCCCCCCeEEEEcCccCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHhhhCCCCCCCeEEEEecCCCC--CCC
Q 018740 168 LMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRL--PFA 245 (351)
Q Consensus 168 ~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~g~~~~~i~~~~~d~~~l--p~~ 245 (351)
.+...+. .++++|||||||+|..+..+++..+ .+++|+|+|+.+++.|+++.... ..++.++.+|+..+ +++
T Consensus 52 ~~a~~~~-~~G~rVLdiG~G~G~~~~~~~~~~~-~~v~~id~~~~~~~~a~~~~~~~----~~~~~~~~~~a~~~~~~~~ 125 (236)
T 3orh_A 52 ALAAAAS-SKGGRVLEVGFGMAIAASKVQEAPI-DEHWIIECNDGVFQRLRDWAPRQ----THKVIPLKGLWEDVAPTLP 125 (236)
T ss_dssp HHHHHHT-TTCEEEEEECCTTSHHHHHHTTSCE-EEEEEEECCHHHHHHHHHHGGGC----SSEEEEEESCHHHHGGGSC
T ss_pred HHHHhhc-cCCCeEEEECCCccHHHHHHHHhCC-cEEEEEeCCHHHHHHHHHHHhhC----CCceEEEeehHHhhccccc
Confidence 3444433 4578999999999999999988764 58999999999999999998776 67889999988653 567
Q ss_pred CCceeeEEe-----ccccccCCChHHHHHHHHhcccCCcEEEEE
Q 018740 246 SSSIDAVHA-----GAAIHCWSSPSTGVAEISRVLRPGGVFVGT 284 (351)
Q Consensus 246 ~~~fD~V~~-----~~vl~h~~d~~~~l~~i~~~LkpgG~li~~ 284 (351)
+++||.|+. ...++|+.++..++++++|+|||||+|++.
T Consensus 126 ~~~FD~i~~D~~~~~~~~~~~~~~~~~~~e~~rvLkPGG~l~f~ 169 (236)
T 3orh_A 126 DGHFDGILYDTYPLSEETWHTHQFNFIKNHAFRLLKPGGVLTYC 169 (236)
T ss_dssp TTCEEEEEECCCCCBGGGTTTHHHHHHHHTHHHHEEEEEEEEEC
T ss_pred ccCCceEEEeeeecccchhhhcchhhhhhhhhheeCCCCEEEEE
Confidence 889999974 566788889999999999999999999874
No 97
>3mq2_A 16S rRNA methyltransferase; methyltranferase, ribosomal, antibiotic resistance, aminoglycoside, S-adenosyl-L-methionine; HET: SAH; 1.69A {Streptomyces SP}
Probab=99.73 E-value=1.1e-17 Score=146.06 Aligned_cols=153 Identities=18% Similarity=0.186 Sum_probs=107.4
Q ss_pred CCCCCCeEEEEcCccCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHhhh-CCCCCCCeEEEEecCCCCCCCCCceeeE
Q 018740 174 KPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQE-SNFPKENFLLVRADISRLPFASSSIDAV 252 (351)
Q Consensus 174 ~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~-~g~~~~~i~~~~~d~~~lp~~~~~fD~V 252 (351)
...++.+|||||||+|.++..+++.++..+|+|+|+|+.|++.+.+++... .....+++.++++|+.++|+++++ |.|
T Consensus 24 ~~~~~~~vLDiGcG~G~~~~~la~~~p~~~v~gvD~s~~~l~~~~~~a~~~~~~~~~~~v~~~~~d~~~l~~~~~~-d~v 102 (218)
T 3mq2_A 24 RSQYDDVVLDVGTGDGKHPYKVARQNPSRLVVALDADKSRMEKISAKAAAKPAKGGLPNLLYLWATAERLPPLSGV-GEL 102 (218)
T ss_dssp HTTSSEEEEEESCTTCHHHHHHHHHCTTEEEEEEESCGGGGHHHHHHHTSCGGGTCCTTEEEEECCSTTCCSCCCE-EEE
T ss_pred hccCCCEEEEecCCCCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhhhhcCCCceEEEecchhhCCCCCCC-CEE
Confidence 345678999999999999999999977789999999999888644333221 001245899999999999987766 766
Q ss_pred Ee---cccc--ccCCChHHHHHHHHhcccCCcEEEEEeeccCCCCCcchHHHHHHHHHhhccCCccCCCHHHHHHHHHHC
Q 018740 253 HA---GAAI--HCWSSPSTGVAEISRVLRPGGVFVGTTYIVDGPFNLIPFSRLLRQNMMQISGSYTFLSEREIEDLCRAC 327 (351)
Q Consensus 253 ~~---~~vl--~h~~d~~~~l~~i~~~LkpgG~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~~ll~~a 327 (351)
.. +..+ +|++++..+++++.++|||||.+++........ ...+.. ...+.....+..+.+..+++++
T Consensus 103 ~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~-~~~~~~-------~~~~~~~~~~~~~~l~~~l~~a 174 (218)
T 3mq2_A 103 HVLMPWGSLLRGVLGSSPEMLRGMAAVCRPGASFLVALNLHAWR-PSVPEV-------GEHPEPTPDSADEWLAPRYAEA 174 (218)
T ss_dssp EEESCCHHHHHHHHTSSSHHHHHHHHTEEEEEEEEEEEEGGGBT-TBCGGG-------TTCCCCCHHHHHHHHHHHHHHT
T ss_pred EEEccchhhhhhhhccHHHHHHHHHHHcCCCcEEEEEecccccc-cccccc-------ccCCccchHHHHHHHHHHHHHc
Confidence 63 3333 388999999999999999999999965443211 111110 0111111111234588899999
Q ss_pred CCeEEEEE
Q 018740 328 GLVDFKCT 335 (351)
Q Consensus 328 Gf~~v~~~ 335 (351)
||++.+..
T Consensus 175 Gf~i~~~~ 182 (218)
T 3mq2_A 175 GWKLADCR 182 (218)
T ss_dssp TEEEEEEE
T ss_pred CCCceeee
Confidence 99988754
No 98
>2zfu_A Nucleomethylin, cerebral protein 1; nucleolar protein, SAM-binding protein, protein structure, N phosphoprotein, nuclear protein; HET: SAH; 2.00A {Homo sapiens}
Probab=99.72 E-value=6.3e-17 Score=140.75 Aligned_cols=126 Identities=18% Similarity=0.241 Sum_probs=105.3
Q ss_pred CCCCeEEEEcCccCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHhhhCCCCCCCeEEEEecCCCCCCCCCceeeEEec
Q 018740 176 VLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLPFASSSIDAVHAG 255 (351)
Q Consensus 176 ~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~g~~~~~i~~~~~d~~~lp~~~~~fD~V~~~ 255 (351)
.++.+|||||||+|.++..+. .+++|+|+|+. ++.++.+|+.++|+++++||+|++.
T Consensus 66 ~~~~~vLDiG~G~G~~~~~l~-----~~v~~~D~s~~------------------~~~~~~~d~~~~~~~~~~fD~v~~~ 122 (215)
T 2zfu_A 66 PASLVVADFGCGDCRLASSIR-----NPVHCFDLASL------------------DPRVTVCDMAQVPLEDESVDVAVFC 122 (215)
T ss_dssp CTTSCEEEETCTTCHHHHHCC-----SCEEEEESSCS------------------STTEEESCTTSCSCCTTCEEEEEEE
T ss_pred CCCCeEEEECCcCCHHHHHhh-----ccEEEEeCCCC------------------CceEEEeccccCCCCCCCEeEEEEe
Confidence 456799999999999988773 38999999985 3457899999999888999999999
Q ss_pred cccccCCChHHHHHHHHhcccCCcEEEEEeeccCCCCCcchHHHHHHHHHhhccCCccCCCHHHHHHHHHHCCCeEEEEE
Q 018740 256 AAIHCWSSPSTGVAEISRVLRPGGVFVGTTYIVDGPFNLIPFSRLLRQNMMQISGSYTFLSEREIEDLCRACGLVDFKCT 335 (351)
Q Consensus 256 ~vl~h~~d~~~~l~~i~~~LkpgG~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~~ll~~aGf~~v~~~ 335 (351)
.++|| .++..+++++.++|+|||.+++.++.. .+.+.+++.++++++||++++..
T Consensus 123 ~~l~~-~~~~~~l~~~~~~L~~gG~l~i~~~~~------------------------~~~~~~~~~~~l~~~Gf~~~~~~ 177 (215)
T 2zfu_A 123 LSLMG-TNIRDFLEEANRVLKPGGLLKVAEVSS------------------------RFEDVRTFLRAVTKLGFKIVSKD 177 (215)
T ss_dssp SCCCS-SCHHHHHHHHHHHEEEEEEEEEEECGG------------------------GCSCHHHHHHHHHHTTEEEEEEE
T ss_pred hhccc-cCHHHHHHHHHHhCCCCeEEEEEEcCC------------------------CCCCHHHHHHHHHHCCCEEEEEe
Confidence 99975 899999999999999999999987542 12388999999999999988855
Q ss_pred e-cCeEEEEEEecCC
Q 018740 336 R-NRGFVMFTATKPS 349 (351)
Q Consensus 336 ~-~g~~~~~~a~kp~ 349 (351)
. .+.+.++.++|.+
T Consensus 178 ~~~~~~~~~~~~k~~ 192 (215)
T 2zfu_A 178 LTNSHFFLFDFQKTG 192 (215)
T ss_dssp CCSTTCEEEEEEECS
T ss_pred cCCCeEEEEEEEecC
Confidence 4 4456777777764
No 99
>1dus_A MJ0882; hypothetical protein, methanococcus jannaschii, structural genomics, BSGC structure funded by NIH; 1.80A {Methanocaldococcus jannaschii} SCOP: c.66.1.4
Probab=99.72 E-value=1.5e-16 Score=135.42 Aligned_cols=119 Identities=15% Similarity=0.177 Sum_probs=100.0
Q ss_pred HHHHHHHhccCCCCCCeEEEEcCccCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHhhhCCCCCCC--eEEEEecCCC
Q 018740 164 KEFELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKEN--FLLVRADISR 241 (351)
Q Consensus 164 ~~~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~g~~~~~--i~~~~~d~~~ 241 (351)
...+.+...+...++.+|||+|||+|.++..+++.+ .+++|+|+++.+++.+++++... + ..+ +.++.+|+.+
T Consensus 39 ~~~~~l~~~~~~~~~~~vLdiG~G~G~~~~~~~~~~--~~v~~~D~~~~~~~~a~~~~~~~-~--~~~~~~~~~~~d~~~ 113 (194)
T 1dus_A 39 KGTKILVENVVVDKDDDILDLGCGYGVIGIALADEV--KSTTMADINRRAIKLAKENIKLN-N--LDNYDIRVVHSDLYE 113 (194)
T ss_dssp HHHHHHHHHCCCCTTCEEEEETCTTSHHHHHHGGGS--SEEEEEESCHHHHHHHHHHHHHT-T--CTTSCEEEEECSTTT
T ss_pred hHHHHHHHHcccCCCCeEEEeCCCCCHHHHHHHHcC--CeEEEEECCHHHHHHHHHHHHHc-C--CCccceEEEECchhc
Confidence 345667777777778899999999999999999884 49999999999999999998765 2 344 9999999977
Q ss_pred CCCCCCceeeEEecccccc-CCChHHHHHHHHhcccCCcEEEEEeecc
Q 018740 242 LPFASSSIDAVHAGAAIHC-WSSPSTGVAEISRVLRPGGVFVGTTYIV 288 (351)
Q Consensus 242 lp~~~~~fD~V~~~~vl~h-~~d~~~~l~~i~~~LkpgG~li~~~~~~ 288 (351)
. .++++||+|++...++| ..+...+++++.++|+|||.+++.++..
T Consensus 114 ~-~~~~~~D~v~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~~ 160 (194)
T 1dus_A 114 N-VKDRKYNKIITNPPIRAGKEVLHRIIEEGKELLKDNGEIWVVIQTK 160 (194)
T ss_dssp T-CTTSCEEEEEECCCSTTCHHHHHHHHHHHHHHEEEEEEEEEEEEST
T ss_pred c-cccCCceEEEECCCcccchhHHHHHHHHHHHHcCCCCEEEEEECCC
Confidence 3 44678999999988887 3456799999999999999999988763
No 100
>2pxx_A Uncharacterized protein MGC2408; structural genomics consortium, SGC, methyltransferase, LOC84291, transferase; HET: SAH; 1.30A {Homo sapiens}
Probab=99.72 E-value=4.5e-17 Score=141.15 Aligned_cols=118 Identities=24% Similarity=0.318 Sum_probs=99.8
Q ss_pred HHHHHHHHhccCCCCCCeEEEEcCccCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHhhhCCCCCCCeEEEEecCCCC
Q 018740 163 EKEFELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRL 242 (351)
Q Consensus 163 ~~~~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~g~~~~~i~~~~~d~~~l 242 (351)
....+.+...+ .++.+|||+|||+|.++..+++.++. +++|+|+|+.+++.++++... .+++.++.+|+.++
T Consensus 30 ~~~~~~l~~~~--~~~~~vLdiGcG~G~~~~~l~~~~~~-~v~~~D~s~~~~~~a~~~~~~-----~~~i~~~~~d~~~~ 101 (215)
T 2pxx_A 30 SSFRALLEPEL--RPEDRILVLGCGNSALSYELFLGGFP-NVTSVDYSSVVVAAMQACYAH-----VPQLRWETMDVRKL 101 (215)
T ss_dssp HHHHHHHGGGC--CTTCCEEEETCTTCSHHHHHHHTTCC-CEEEEESCHHHHHHHHHHTTT-----CTTCEEEECCTTSC
T ss_pred HHHHHHHHHhc--CCCCeEEEECCCCcHHHHHHHHcCCC-cEEEEeCCHHHHHHHHHhccc-----CCCcEEEEcchhcC
Confidence 33445555555 34779999999999999999998753 899999999999999998653 36899999999999
Q ss_pred CCCCCceeeEEeccccccCC---------------ChHHHHHHHHhcccCCcEEEEEeecc
Q 018740 243 PFASSSIDAVHAGAAIHCWS---------------SPSTGVAEISRVLRPGGVFVGTTYIV 288 (351)
Q Consensus 243 p~~~~~fD~V~~~~vl~h~~---------------d~~~~l~~i~~~LkpgG~li~~~~~~ 288 (351)
++++++||+|++..+++|+. ++..+++++.++|+|||.+++.++..
T Consensus 102 ~~~~~~fD~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~~~~ 162 (215)
T 2pxx_A 102 DFPSASFDVVLEKGTLDALLAGERDPWTVSSEGVHTVDQVLSEVSRVLVPGGRFISMTSAA 162 (215)
T ss_dssp CSCSSCEEEEEEESHHHHHTTTCSCTTSCCHHHHHHHHHHHHHHHHHEEEEEEEEEEESCC
T ss_pred CCCCCcccEEEECcchhhhccccccccccccchhHHHHHHHHHHHHhCcCCCEEEEEeCCC
Confidence 88889999999999987765 55799999999999999999988753
No 101
>3hm2_A Precorrin-6Y C5,15-methyltransferase; alpha-beta-sandwich, structural genomics, PSI-2, protein structure initiative; 2.21A {Corynebacterium diphtheriae}
Probab=99.72 E-value=1.3e-16 Score=134.33 Aligned_cols=135 Identities=19% Similarity=0.176 Sum_probs=106.2
Q ss_pred HHHHHhccCCCCCCeEEEEcCccCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHhhhCCCCCCCeEEEEecCCC-CCC
Q 018740 166 FELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISR-LPF 244 (351)
Q Consensus 166 ~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~g~~~~~i~~~~~d~~~-lp~ 244 (351)
...+...+...++.+|||+|||+|.++..+++..+..+|+|+|+|+.+++.+++++... +. ..++ ++.+|... ++.
T Consensus 14 ~~~~~~~~~~~~~~~vldiG~G~G~~~~~l~~~~~~~~v~~vD~~~~~~~~a~~~~~~~-~~-~~~~-~~~~d~~~~~~~ 90 (178)
T 3hm2_A 14 RALAISALAPKPHETLWDIGGGSGSIAIEWLRSTPQTTAVCFEISEERRERILSNAINL-GV-SDRI-AVQQGAPRAFDD 90 (178)
T ss_dssp HHHHHHHHCCCTTEEEEEESTTTTHHHHHHHTTSSSEEEEEECSCHHHHHHHHHHHHTT-TC-TTSE-EEECCTTGGGGG
T ss_pred HHHHHHHhcccCCCeEEEeCCCCCHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHHHHh-CC-CCCE-EEecchHhhhhc
Confidence 34556666777788999999999999999999876679999999999999999988775 22 2378 88888744 443
Q ss_pred CCCceeeEEeccccccCCChHHHHHHHHhcccCCcEEEEEeeccCCCCCcchHHHHHHHHHhhccCCccCCCHHHHHHHH
Q 018740 245 ASSSIDAVHAGAAIHCWSSPSTGVAEISRVLRPGGVFVGTTYIVDGPFNLIPFSRLLRQNMMQISGSYTFLSEREIEDLC 324 (351)
Q Consensus 245 ~~~~fD~V~~~~vl~h~~d~~~~l~~i~~~LkpgG~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~~ll 324 (351)
.+++||+|++..+++| ..+++++.++|+|||.+++.+...+ +...+..++
T Consensus 91 ~~~~~D~i~~~~~~~~----~~~l~~~~~~L~~gG~l~~~~~~~~--------------------------~~~~~~~~~ 140 (178)
T 3hm2_A 91 VPDNPDVIFIGGGLTA----PGVFAAAWKRLPVGGRLVANAVTVE--------------------------SEQMLWALR 140 (178)
T ss_dssp CCSCCSEEEECC-TTC----TTHHHHHHHTCCTTCEEEEEECSHH--------------------------HHHHHHHHH
T ss_pred cCCCCCEEEECCcccH----HHHHHHHHHhcCCCCEEEEEeeccc--------------------------cHHHHHHHH
Confidence 3388999999999988 6789999999999999998766421 234666777
Q ss_pred HHCCCeEEE
Q 018740 325 RACGLVDFK 333 (351)
Q Consensus 325 ~~aGf~~v~ 333 (351)
++.|+....
T Consensus 141 ~~~~~~~~~ 149 (178)
T 3hm2_A 141 KQFGGTISS 149 (178)
T ss_dssp HHHCCEEEE
T ss_pred HHcCCeeEE
Confidence 888887655
No 102
>1zx0_A Guanidinoacetate N-methyltransferase; structural genomics, structural genomics consortium; HET: SAH; 1.86A {Homo sapiens} PDB: 3orh_A* 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=99.72 E-value=7.9e-18 Score=148.87 Aligned_cols=107 Identities=9% Similarity=0.212 Sum_probs=88.6
Q ss_pred CCCCeEEEEcCccCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHhhhCCCCCCCeEEEEecCCCC--CCCCCceeeEE
Q 018740 176 VLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRL--PFASSSIDAVH 253 (351)
Q Consensus 176 ~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~g~~~~~i~~~~~d~~~l--p~~~~~fD~V~ 253 (351)
.++.+|||||||+|.++..+++.++ .+|+|+|+|+.|++.|+++.... ..++.++++|+.++ ++++++||+|+
T Consensus 59 ~~~~~vLDiGcGtG~~~~~l~~~~~-~~v~gvD~s~~~l~~a~~~~~~~----~~~v~~~~~d~~~~~~~~~~~~fD~V~ 133 (236)
T 1zx0_A 59 SKGGRVLEVGFGMAIAASKVQEAPI-DEHWIIECNDGVFQRLRDWAPRQ----THKVIPLKGLWEDVAPTLPDGHFDGIL 133 (236)
T ss_dssp TTCEEEEEECCTTSHHHHHHHTSCE-EEEEEEECCHHHHHHHHHHGGGC----SSEEEEEESCHHHHGGGSCTTCEEEEE
T ss_pred CCCCeEEEEeccCCHHHHHHHhcCC-CeEEEEcCCHHHHHHHHHHHHhc----CCCeEEEecCHHHhhcccCCCceEEEE
Confidence 4577999999999999999977653 48999999999999999987765 47899999999888 88889999999
Q ss_pred e-cccc--c--cCCChHHHHHHHHhcccCCcEEEEEeec
Q 018740 254 A-GAAI--H--CWSSPSTGVAEISRVLRPGGVFVGTTYI 287 (351)
Q Consensus 254 ~-~~vl--~--h~~d~~~~l~~i~~~LkpgG~li~~~~~ 287 (351)
+ .+.+ + |..++..++++++++|||||++++....
T Consensus 134 ~d~~~~~~~~~~~~~~~~~l~~~~r~LkpgG~l~~~~~~ 172 (236)
T 1zx0_A 134 YDTYPLSEETWHTHQFNFIKNHAFRLLKPGGVLTYCNLT 172 (236)
T ss_dssp ECCCCCBGGGTTTHHHHHHHHTHHHHEEEEEEEEECCHH
T ss_pred ECCcccchhhhhhhhHHHHHHHHHHhcCCCeEEEEEecC
Confidence 9 5543 1 2223447799999999999999986543
No 103
>1zg3_A Isoflavanone 4'-O-methyltransferase; rossman fold, plant Pro transferase; HET: 2HI SAH; 2.35A {Medicago truncatula} PDB: 1zga_A* 1zhf_A* 1zgj_A*
Probab=99.72 E-value=7.1e-17 Score=151.68 Aligned_cols=157 Identities=15% Similarity=0.116 Sum_probs=117.8
Q ss_pred CCCeEEEEcCccCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHhhhCCCCCCCeEEEEecCCCCCCCCCceeeEEecc
Q 018740 177 LGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLPFASSSIDAVHAGA 256 (351)
Q Consensus 177 ~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~g~~~~~i~~~~~d~~~lp~~~~~fD~V~~~~ 256 (351)
+..+|||||||+|.++..+++.++..+++++|+ +.+++.+++ ..+++++.+|+.+ +++ .||+|++.+
T Consensus 193 ~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~---------~~~v~~~~~d~~~-~~~--~~D~v~~~~ 259 (358)
T 1zg3_A 193 GLESLVDVGGGTGGVTKLIHEIFPHLKCTVFDQ-PQVVGNLTG---------NENLNFVGGDMFK-SIP--SADAVLLKW 259 (358)
T ss_dssp TCSEEEEETCTTSHHHHHHHHHCTTSEEEEEEC-HHHHSSCCC---------CSSEEEEECCTTT-CCC--CCSEEEEES
T ss_pred CCCEEEEECCCcCHHHHHHHHHCCCCeEEEecc-HHHHhhccc---------CCCcEEEeCccCC-CCC--CceEEEEcc
Confidence 457999999999999999999988889999999 788876653 3569999999987 655 499999999
Q ss_pred ccccCCChH--HHHHHHHhcccC---CcEEEEEeeccCCCCCc--chHHHHHHHHHhhccCCccCCCHHHHHHHHHHCCC
Q 018740 257 AIHCWSSPS--TGVAEISRVLRP---GGVFVGTTYIVDGPFNL--IPFSRLLRQNMMQISGSYTFLSEREIEDLCRACGL 329 (351)
Q Consensus 257 vl~h~~d~~--~~l~~i~~~Lkp---gG~li~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~s~~~l~~ll~~aGf 329 (351)
++||++|+. .+|++++++|+| ||++++.++..+..... ....................++.+++.++++++||
T Consensus 260 vlh~~~d~~~~~~l~~~~~~L~p~~~gG~l~i~e~~~~~~~~~~~~~~~~~~~d~~~~~~~~g~~~t~~e~~~ll~~aGf 339 (358)
T 1zg3_A 260 VLHDWNDEQSLKILKNSKEAISHKGKDGKVIIIDISIDETSDDRGLTELQLDYDLVMLTMFLGKERTKQEWEKLIYDAGF 339 (358)
T ss_dssp CGGGSCHHHHHHHHHHHHHHTGGGGGGCEEEEEECEECTTCSCHHHHHHHHHHHHHHHHHHSCCCEEHHHHHHHHHHTTC
T ss_pred cccCCCHHHHHHHHHHHHHhCCCCCCCcEEEEEEeccCCCCccchhhhHHHhhCHHHhccCCCCCCCHHHHHHHHHHcCC
Confidence 999999987 999999999999 99999988775432211 01111111111111113356799999999999999
Q ss_pred eEEEEEec-CeEEEEEEe
Q 018740 330 VDFKCTRN-RGFVMFTAT 346 (351)
Q Consensus 330 ~~v~~~~~-g~~~~~~a~ 346 (351)
++++.... +...++.++
T Consensus 340 ~~~~~~~~~~~~~vie~~ 357 (358)
T 1zg3_A 340 SSYKITPISGFKSLIEVY 357 (358)
T ss_dssp CEEEEEEETTTEEEEEEE
T ss_pred CeeEEEecCCCcEEEEEe
Confidence 99886554 444555444
No 104
>3m33_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MCSG, midwest center for structural genomics; 2.19A {Deinococcus radiodurans}
Probab=99.71 E-value=8.6e-17 Score=141.28 Aligned_cols=117 Identities=16% Similarity=0.195 Sum_probs=99.1
Q ss_pred CCCCeEEEEcCccCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHhhhCCCCCCCeEEEEecC-CCCCCC-CCceeeEE
Q 018740 176 VLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADI-SRLPFA-SSSIDAVH 253 (351)
Q Consensus 176 ~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~g~~~~~i~~~~~d~-~~lp~~-~~~fD~V~ 253 (351)
.++.+|||||||+|.++..+++.+. +|+|+|+|+.+++.++++ .+++.++++|+ ..+|++ +++||+|+
T Consensus 47 ~~~~~vLDiGcG~G~~~~~l~~~~~--~v~~vD~s~~~~~~a~~~--------~~~~~~~~~d~~~~~~~~~~~~fD~v~ 116 (226)
T 3m33_A 47 TPQTRVLEAGCGHGPDAARFGPQAA--RWAAYDFSPELLKLARAN--------APHADVYEWNGKGELPAGLGAPFGLIV 116 (226)
T ss_dssp CTTCEEEEESCTTSHHHHHHGGGSS--EEEEEESCHHHHHHHHHH--------CTTSEEEECCSCSSCCTTCCCCEEEEE
T ss_pred CCCCeEEEeCCCCCHHHHHHHHcCC--EEEEEECCHHHHHHHHHh--------CCCceEEEcchhhccCCcCCCCEEEEE
Confidence 3478999999999999999999865 999999999999999987 46899999999 678888 88999999
Q ss_pred eccccccCCChHHHHHHHHhcccCCcEEEEEeeccCCCCCcchHHHHHHHHHhhccCCccCCCHHHHHHHHHHCCCeEEE
Q 018740 254 AGAAIHCWSSPSTGVAEISRVLRPGGVFVGTTYIVDGPFNLIPFSRLLRQNMMQISGSYTFLSEREIEDLCRACGLVDFK 333 (351)
Q Consensus 254 ~~~vl~h~~d~~~~l~~i~~~LkpgG~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~~ll~~aGf~~v~ 333 (351)
+. .++..+++++.++|||||.++. .....+.+++.++++++||.++.
T Consensus 117 ~~------~~~~~~l~~~~~~LkpgG~l~~---------------------------~~~~~~~~~~~~~l~~~Gf~~~~ 163 (226)
T 3m33_A 117 SR------RGPTSVILRLPELAAPDAHFLY---------------------------VGPRLNVPEVPERLAAVGWDIVA 163 (226)
T ss_dssp EE------SCCSGGGGGHHHHEEEEEEEEE---------------------------EESSSCCTHHHHHHHHTTCEEEE
T ss_pred eC------CCHHHHHHHHHHHcCCCcEEEE---------------------------eCCcCCHHHHHHHHHHCCCeEEE
Confidence 87 4778889999999999999991 11233556788889999998776
Q ss_pred EE
Q 018740 334 CT 335 (351)
Q Consensus 334 ~~ 335 (351)
..
T Consensus 164 ~~ 165 (226)
T 3m33_A 164 ED 165 (226)
T ss_dssp EE
T ss_pred EE
Confidence 44
No 105
>2ld4_A Anamorsin; methyltransferase-like fold, alpha/beta fold, iron-sulfur PR biogenesis, apoptosis; NMR {Homo sapiens} PDB: 2yui_A
Probab=99.70 E-value=7.9e-17 Score=135.80 Aligned_cols=117 Identities=16% Similarity=0.143 Sum_probs=97.2
Q ss_pred cCCCCCCeEEEEcCccCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHhhhCCCCCCCeEEEEecCCCCCC---CCCce
Q 018740 173 LKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLPF---ASSSI 249 (351)
Q Consensus 173 l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~g~~~~~i~~~~~d~~~lp~---~~~~f 249 (351)
++..++.+|||+|||. +++|+|+.|++.|+++.. .++.+.++|+.++++ ++++|
T Consensus 8 ~g~~~g~~vL~~~~g~----------------v~vD~s~~ml~~a~~~~~-------~~~~~~~~d~~~~~~~~~~~~~f 64 (176)
T 2ld4_A 8 FGISAGQFVAVVWDKS----------------SPVEALKGLVDKLQALTG-------NEGRVSVENIKQLLQSAHKESSF 64 (176)
T ss_dssp TTCCTTSEEEEEECTT----------------SCHHHHHHHHHHHHHHTT-------TTSEEEEEEGGGGGGGCCCSSCE
T ss_pred cCCCCCCEEEEecCCc----------------eeeeCCHHHHHHHHHhcc-------cCcEEEEechhcCccccCCCCCE
Confidence 3556789999999986 239999999999998742 358999999999887 78999
Q ss_pred eeEEeccccccC-CChHHHHHHHHhcccCCcEEEEEeeccCCCCCcchHHHHHHHHHhhccCCccCCCHHHHHHHHHHCC
Q 018740 250 DAVHAGAAIHCW-SSPSTGVAEISRVLRPGGVFVGTTYIVDGPFNLIPFSRLLRQNMMQISGSYTFLSEREIEDLCRACG 328 (351)
Q Consensus 250 D~V~~~~vl~h~-~d~~~~l~~i~~~LkpgG~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~~ll~~aG 328 (351)
|+|++..++||+ +++..++++++++|||||++++..+...... ......+.+++.++|+++|
T Consensus 65 D~V~~~~~l~~~~~~~~~~l~~~~r~LkpgG~l~~~~~~~~~~~-----------------~~~~~~~~~~~~~~l~~aG 127 (176)
T 2ld4_A 65 DIILSGLVPGSTTLHSAEILAEIARILRPGGCLFLKEPVETAVD-----------------NNSKVKTASKLCSALTLSG 127 (176)
T ss_dssp EEEEECCSTTCCCCCCHHHHHHHHHHEEEEEEEEEEEEEESSSC-----------------SSSSSCCHHHHHHHHHHTT
T ss_pred eEEEECChhhhcccCHHHHHHHHHHHCCCCEEEEEEcccccccc-----------------cccccCCHHHHHHHHHHCC
Confidence 999999999999 9999999999999999999999766533110 0223357899999999999
Q ss_pred C
Q 018740 329 L 329 (351)
Q Consensus 329 f 329 (351)
|
T Consensus 128 f 128 (176)
T 2ld4_A 128 L 128 (176)
T ss_dssp C
T ss_pred C
Confidence 9
No 106
>3fpf_A Mtnas, putative uncharacterized protein; thermonicotianamine, nicotianamine, biosynthetic protein; HET: TNA MTA; 1.66A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 3fpe_A* 3fph_A* 3fpg_A* 3fpj_A* 3o31_A*
Probab=99.70 E-value=1.5e-16 Score=143.67 Aligned_cols=108 Identities=10% Similarity=0.066 Sum_probs=91.5
Q ss_pred hccCCCCCCeEEEEcCccCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHhhhCCCCCCCeEEEEecCCCCCCCCCcee
Q 018740 171 GYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLPFASSSID 250 (351)
Q Consensus 171 ~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~g~~~~~i~~~~~d~~~lp~~~~~fD 250 (351)
..+...++.+|||||||+|.++..+..+.+..+|+|+|+|+.|++.|+++++.. |. .+++++++|+.++| +++||
T Consensus 116 ~la~l~~g~rVLDIGcG~G~~ta~~lA~~~ga~V~gIDis~~~l~~Ar~~~~~~-gl--~~v~~v~gDa~~l~--d~~FD 190 (298)
T 3fpf_A 116 ALGRFRRGERAVFIGGGPLPLTGILLSHVYGMRVNVVEIEPDIAELSRKVIEGL-GV--DGVNVITGDETVID--GLEFD 190 (298)
T ss_dssp HHTTCCTTCEEEEECCCSSCHHHHHHHHTTCCEEEEEESSHHHHHHHHHHHHHH-TC--CSEEEEESCGGGGG--GCCCS
T ss_pred HHcCCCCcCEEEEECCCccHHHHHHHHHccCCEEEEEECCHHHHHHHHHHHHhc-CC--CCeEEEECchhhCC--CCCcC
Confidence 356677899999999999987755544444669999999999999999998876 32 78999999999876 68999
Q ss_pred eEEeccccccCCChHHHHHHHHhcccCCcEEEEEee
Q 018740 251 AVHAGAAIHCWSSPSTGVAEISRVLRPGGVFVGTTY 286 (351)
Q Consensus 251 ~V~~~~vl~h~~d~~~~l~~i~~~LkpgG~li~~~~ 286 (351)
+|++... .+++..+++++.++|||||++++...
T Consensus 191 vV~~~a~---~~d~~~~l~el~r~LkPGG~Lvv~~~ 223 (298)
T 3fpf_A 191 VLMVAAL---AEPKRRVFRNIHRYVDTETRIIYRTY 223 (298)
T ss_dssp EEEECTT---CSCHHHHHHHHHHHCCTTCEEEEEEC
T ss_pred EEEECCC---ccCHHHHHHHHHHHcCCCcEEEEEcC
Confidence 9998655 57899999999999999999998764
No 107
>2nxc_A L11 mtase, ribosomal protein L11 methyltransferase; transferase S-adenosly-L-methionine dependent methyltransfer posttranslational modification; 1.59A {Thermus thermophilus} SCOP: c.66.1.39 PDB: 1ufk_A 2nxe_A* 2nxj_A 2nxn_A 2zbp_A* 2zbq_A* 2zbr_A* 3cjq_A* 3cjr_A* 3cju_A* 3egv_A* 3cjt_A*
Probab=99.70 E-value=1.6e-16 Score=142.14 Aligned_cols=143 Identities=15% Similarity=0.190 Sum_probs=116.4
Q ss_pred HHHHhccCCCCCCeEEEEcCccCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHhhhCCCCCCCeEEEEecCCCCCCCC
Q 018740 167 ELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLPFAS 246 (351)
Q Consensus 167 ~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~g~~~~~i~~~~~d~~~lp~~~ 246 (351)
+.+...+ .++.+|||+|||+|.++..+++.++ +|+|+|+|+.+++.+++++..+ ...+.+..+|+.+. +++
T Consensus 112 ~~l~~~~--~~~~~VLDiGcG~G~l~~~la~~g~--~v~gvDi~~~~v~~a~~n~~~~----~~~v~~~~~d~~~~-~~~ 182 (254)
T 2nxc_A 112 KALARHL--RPGDKVLDLGTGSGVLAIAAEKLGG--KALGVDIDPMVLPQAEANAKRN----GVRPRFLEGSLEAA-LPF 182 (254)
T ss_dssp HHHHHHC--CTTCEEEEETCTTSHHHHHHHHTTC--EEEEEESCGGGHHHHHHHHHHT----TCCCEEEESCHHHH-GGG
T ss_pred HHHHHhc--CCCCEEEEecCCCcHHHHHHHHhCC--eEEEEECCHHHHHHHHHHHHHc----CCcEEEEECChhhc-CcC
Confidence 3444443 4578999999999999999999887 9999999999999999998876 22288999988662 346
Q ss_pred CceeeEEeccccccCCChHHHHHHHHhcccCCcEEEEEeeccCCCCCcchHHHHHHHHHhhccCCccCCCHHHHHHHHHH
Q 018740 247 SSIDAVHAGAAIHCWSSPSTGVAEISRVLRPGGVFVGTTYIVDGPFNLIPFSRLLRQNMMQISGSYTFLSEREIEDLCRA 326 (351)
Q Consensus 247 ~~fD~V~~~~vl~h~~d~~~~l~~i~~~LkpgG~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~~ll~~ 326 (351)
++||+|+++...++ ...++.++.++|+|||+++++..... ..+++.+++++
T Consensus 183 ~~fD~Vv~n~~~~~---~~~~l~~~~~~LkpgG~lils~~~~~--------------------------~~~~v~~~l~~ 233 (254)
T 2nxc_A 183 GPFDLLVANLYAEL---HAALAPRYREALVPGGRALLTGILKD--------------------------RAPLVREAMAG 233 (254)
T ss_dssp CCEEEEEEECCHHH---HHHHHHHHHHHEEEEEEEEEEEEEGG--------------------------GHHHHHHHHHH
T ss_pred CCCCEEEECCcHHH---HHHHHHHHHHHcCCCCEEEEEeeccC--------------------------CHHHHHHHHHH
Confidence 78999999766554 46889999999999999999765421 35789999999
Q ss_pred CCCeEEEEEecCeEEEEEEec
Q 018740 327 CGLVDFKCTRNRGFVMFTATK 347 (351)
Q Consensus 327 aGf~~v~~~~~g~~~~~~a~k 347 (351)
+||++++....+.|..+.++|
T Consensus 234 ~Gf~~~~~~~~~~W~~l~~~k 254 (254)
T 2nxc_A 234 AGFRPLEEAAEGEWVLLAYGR 254 (254)
T ss_dssp TTCEEEEEEEETTEEEEEEEC
T ss_pred CCCEEEEEeccCCeEEEEEEC
Confidence 999999988888888777775
No 108
>1l3i_A Precorrin-6Y methyltransferase/putative decarboxylase; structural genomics, beta barrel, rossmann fold, tetramer; HET: SAH; 1.95A {Methanothermobacterthermautotrophicus} SCOP: c.66.1.22 PDB: 1kxz_A 1l3b_A 1f38_A 1l3c_A*
Probab=99.70 E-value=2.5e-16 Score=133.73 Aligned_cols=134 Identities=19% Similarity=0.240 Sum_probs=108.2
Q ss_pred HHHHHHHHhccCCCCCCeEEEEcCccCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHhhhCCCCCCCeEEEEecCCCC
Q 018740 163 EKEFELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRL 242 (351)
Q Consensus 163 ~~~~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~g~~~~~i~~~~~d~~~l 242 (351)
......+...+...++.+|||+|||+|.++..+++.+ .+++|+|+|+.+++.+++++... +. ..++.+..+|+.+
T Consensus 19 ~~~~~~~~~~~~~~~~~~vldiG~G~G~~~~~l~~~~--~~v~~~D~~~~~~~~a~~~~~~~-~~-~~~~~~~~~d~~~- 93 (192)
T 1l3i_A 19 MEVRCLIMCLAEPGKNDVAVDVGCGTGGVTLELAGRV--RRVYAIDRNPEAISTTEMNLQRH-GL-GDNVTLMEGDAPE- 93 (192)
T ss_dssp HHHHHHHHHHHCCCTTCEEEEESCTTSHHHHHHHTTS--SEEEEEESCHHHHHHHHHHHHHT-TC-CTTEEEEESCHHH-
T ss_pred HHHHHHHHHhcCCCCCCEEEEECCCCCHHHHHHHHhc--CEEEEEECCHHHHHHHHHHHHHc-CC-CcceEEEecCHHH-
Confidence 4445566666777778899999999999999999987 49999999999999999988765 11 2689999999876
Q ss_pred CCCC-CceeeEEeccccccCCChHHHHHHHHhcccCCcEEEEEeeccCCCCCcchHHHHHHHHHhhccCCccCCCHHHHH
Q 018740 243 PFAS-SSIDAVHAGAAIHCWSSPSTGVAEISRVLRPGGVFVGTTYIVDGPFNLIPFSRLLRQNMMQISGSYTFLSEREIE 321 (351)
Q Consensus 243 p~~~-~~fD~V~~~~vl~h~~d~~~~l~~i~~~LkpgG~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~ 321 (351)
++++ ++||+|++..+++| ...+++++.++|+|||.+++..+..+ +..++.
T Consensus 94 ~~~~~~~~D~v~~~~~~~~---~~~~l~~~~~~l~~gG~l~~~~~~~~--------------------------~~~~~~ 144 (192)
T 1l3i_A 94 ALCKIPDIDIAVVGGSGGE---LQEILRIIKDKLKPGGRIIVTAILLE--------------------------TKFEAM 144 (192)
T ss_dssp HHTTSCCEEEEEESCCTTC---HHHHHHHHHHTEEEEEEEEEEECBHH--------------------------HHHHHH
T ss_pred hcccCCCCCEEEECCchHH---HHHHHHHHHHhcCCCcEEEEEecCcc--------------------------hHHHHH
Confidence 2233 58999999888764 58899999999999999999766421 235788
Q ss_pred HHHHHCCCe
Q 018740 322 DLCRACGLV 330 (351)
Q Consensus 322 ~ll~~aGf~ 330 (351)
+++++.||.
T Consensus 145 ~~l~~~g~~ 153 (192)
T 1l3i_A 145 ECLRDLGFD 153 (192)
T ss_dssp HHHHHTTCC
T ss_pred HHHHHCCCc
Confidence 899999994
No 109
>2b3t_A Protein methyltransferase HEMK; translation termination, methylation, conformational changes; HET: SAH; 3.10A {Escherichia coli} SCOP: c.66.1.30 PDB: 1t43_A*
Probab=99.70 E-value=4.1e-16 Score=141.14 Aligned_cols=153 Identities=12% Similarity=0.091 Sum_probs=119.0
Q ss_pred HHHHHHHHhccCCCCCCeEEEEcCccCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHhhhCCCCCCCeEEEEecCCCC
Q 018740 163 EKEFELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRL 242 (351)
Q Consensus 163 ~~~~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~g~~~~~i~~~~~d~~~l 242 (351)
+...+.+...+. .++.+|||+|||+|.++..+++..+..+|+|+|+|+.+++.+++++... + ..++.++++|+.+.
T Consensus 96 e~l~~~~l~~~~-~~~~~vLDlG~GsG~~~~~la~~~~~~~v~~vD~s~~~l~~a~~n~~~~-~--~~~v~~~~~d~~~~ 171 (276)
T 2b3t_A 96 ECLVEQALARLP-EQPCRILDLGTGTGAIALALASERPDCEIIAVDRMPDAVSLAQRNAQHL-A--IKNIHILQSDWFSA 171 (276)
T ss_dssp HHHHHHHHHHSC-SSCCEEEEETCTTSHHHHHHHHHCTTSEEEEECSSHHHHHHHHHHHHHH-T--CCSEEEECCSTTGG
T ss_pred HHHHHHHHHhcc-cCCCEEEEecCCccHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHc-C--CCceEEEEcchhhh
Confidence 334555666654 4567999999999999999998877779999999999999999998876 2 34799999999773
Q ss_pred CCCCCceeeEEec-------------cccccCC------------ChHHHHHHHHhcccCCcEEEEEeeccCCCCCcchH
Q 018740 243 PFASSSIDAVHAG-------------AAIHCWS------------SPSTGVAEISRVLRPGGVFVGTTYIVDGPFNLIPF 297 (351)
Q Consensus 243 p~~~~~fD~V~~~-------------~vl~h~~------------d~~~~l~~i~~~LkpgG~li~~~~~~~~~~~~~~~ 297 (351)
+++++||+|+++ .+++|.+ +...+++++.++|+|||++++...
T Consensus 172 -~~~~~fD~Iv~npPy~~~~~~~l~~~v~~~~p~~al~~~~~g~~~~~~~l~~~~~~LkpgG~l~~~~~----------- 239 (276)
T 2b3t_A 172 -LAGQQFAMIVSNPPYIDEQDPHLQQGDVRFEPLTALVAADSGMADIVHIIEQSRNALVSGGFLLLEHG----------- 239 (276)
T ss_dssp -GTTCCEEEEEECCCCBCTTCHHHHSSGGGSSCSTTTBCHHHHTHHHHHHHHHHGGGEEEEEEEEEECC-----------
T ss_pred -cccCCccEEEECCCCCCccccccChhhhhcCcHHHHcCCCcHHHHHHHHHHHHHHhcCCCCEEEEEEC-----------
Confidence 346789999998 3555543 246789999999999999998521
Q ss_pred HHHHHHHHhhccCCccCCCHHHHHHHHHHCCCeEEEEE--ecCeEEEEEEec
Q 018740 298 SRLLRQNMMQISGSYTFLSEREIEDLCRACGLVDFKCT--RNRGFVMFTATK 347 (351)
Q Consensus 298 ~~~~~~~~~~~~~~~~~~s~~~l~~ll~~aGf~~v~~~--~~g~~~~~~a~k 347 (351)
+...+++.++++++||..++.. ..|.-.++.++|
T Consensus 240 ----------------~~~~~~~~~~l~~~Gf~~v~~~~d~~g~~r~~~~~~ 275 (276)
T 2b3t_A 240 ----------------WQQGEAVRQAFILAGYHDVETCRDYGDNERVTLGRY 275 (276)
T ss_dssp ----------------SSCHHHHHHHHHHTTCTTCCEEECTTSSEEEEEEEC
T ss_pred ----------------chHHHHHHHHHHHCCCcEEEEEecCCCCCcEEEEEE
Confidence 2356789999999999876643 356666666654
No 110
>3giw_A Protein of unknown function DUF574; rossmann-fold protein, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 1.45A {Streptomyces avermitilis} PDB: 3go4_A*
Probab=99.70 E-value=1.3e-16 Score=142.55 Aligned_cols=149 Identities=15% Similarity=0.079 Sum_probs=111.0
Q ss_pred CCCeEEEEcCcc---CHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHhhhCCCCCCCeEEEEecCCCCC------CCCC
Q 018740 177 LGGNIIDASCGS---GLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLP------FASS 247 (351)
Q Consensus 177 ~~~~vLDiGcG~---G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~g~~~~~i~~~~~d~~~lp------~~~~ 247 (351)
...+|||||||+ |.....+.+..+..+|+++|.|+.|++.|++++... ...++.++++|+.+++ ...+
T Consensus 78 g~~q~LDLGcG~pT~~~~~~la~~~~P~arVv~VD~sp~mLa~Ar~~l~~~---~~~~~~~v~aD~~~~~~~l~~~~~~~ 154 (277)
T 3giw_A 78 GIRQFLDIGTGIPTSPNLHEIAQSVAPESRVVYVDNDPIVLTLSQGLLAST---PEGRTAYVEADMLDPASILDAPELRD 154 (277)
T ss_dssp CCCEEEEESCCSCCSSCHHHHHHHHCTTCEEEEEECCHHHHHTTHHHHCCC---SSSEEEEEECCTTCHHHHHTCHHHHT
T ss_pred CCCEEEEeCCCCCcccHHHHHHHHHCCCCEEEEEeCChHHHHHHHHHhccC---CCCcEEEEEecccChhhhhccccccc
Confidence 346899999997 344444445567789999999999999999987653 1347999999998852 1134
Q ss_pred cee-----eEEeccccccCCC---hHHHHHHHHhcccCCcEEEEEeeccCCCCCcchHHHHHHHHHhhccCCccCCCHHH
Q 018740 248 SID-----AVHAGAAIHCWSS---PSTGVAEISRVLRPGGVFVGTTYIVDGPFNLIPFSRLLRQNMMQISGSYTFLSERE 319 (351)
Q Consensus 248 ~fD-----~V~~~~vl~h~~d---~~~~l~~i~~~LkpgG~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~ 319 (351)
.|| .|+++.+|||++| +..+++++.+.|+|||+|++++...+.. ..........+......+.+++.++
T Consensus 155 ~~D~~~p~av~~~avLH~l~d~~~p~~~l~~l~~~L~PGG~Lvls~~~~d~~---p~~~~~~~~~~~~~g~p~~~rs~~e 231 (277)
T 3giw_A 155 TLDLTRPVALTVIAIVHFVLDEDDAVGIVRRLLEPLPSGSYLAMSIGTAEFA---PQEVGRVAREYAARNMPMRLRTHAE 231 (277)
T ss_dssp TCCTTSCCEEEEESCGGGSCGGGCHHHHHHHHHTTSCTTCEEEEEEECCTTS---HHHHHHHHHHHHHTTCCCCCCCHHH
T ss_pred ccCcCCcchHHhhhhHhcCCchhhHHHHHHHHHHhCCCCcEEEEEeccCCCC---HHHHHHHHHHHHhcCCCCccCCHHH
Confidence 566 6889999999998 5689999999999999999998876521 1222333333333233467889999
Q ss_pred HHHHHHHCCCeEEE
Q 018740 320 IEDLCRACGLVDFK 333 (351)
Q Consensus 320 l~~ll~~aGf~~v~ 333 (351)
+..++. ||+.++
T Consensus 232 i~~~f~--Glelve 243 (277)
T 3giw_A 232 AEEFFE--GLELVE 243 (277)
T ss_dssp HHHTTT--TSEECT
T ss_pred HHHHhC--CCcccC
Confidence 999995 999766
No 111
>4df3_A Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; NADP rossmann superfamily, S-adenosyl-L-M (SAM) binding, nucleolus; HET: SAM; 1.73A {Aeropyrum pernix}
Probab=99.70 E-value=5.4e-16 Score=135.94 Aligned_cols=151 Identities=13% Similarity=0.096 Sum_probs=112.5
Q ss_pred ccCCCCCCeEEEEcCccCHHHHHHHHh-CCCCeEEEEeCCHHHHHHHHHHHhhhCCCCCCCeEEEEecCCC---CCCCCC
Q 018740 172 YLKPVLGGNIIDASCGSGLFSRIFAKS-GLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISR---LPFASS 247 (351)
Q Consensus 172 ~l~~~~~~~vLDiGcG~G~~~~~l~~~-~~~~~v~gvD~s~~~~~~a~~~~~~~~g~~~~~i~~~~~d~~~---lp~~~~ 247 (351)
.+...+|.+|||+|||+|.++..+++. |+.++|+|+|+++.|++.+++++... .|+..+.+|... .+...+
T Consensus 72 ~l~ikpG~~VldlG~G~G~~~~~la~~VG~~G~V~avD~s~~~~~~l~~~a~~~-----~ni~~V~~d~~~p~~~~~~~~ 146 (233)
T 4df3_A 72 ELPVKEGDRILYLGIASGTTASHMSDIIGPRGRIYGVEFAPRVMRDLLTVVRDR-----RNIFPILGDARFPEKYRHLVE 146 (233)
T ss_dssp CCCCCTTCEEEEETCTTSHHHHHHHHHHCTTCEEEEEECCHHHHHHHHHHSTTC-----TTEEEEESCTTCGGGGTTTCC
T ss_pred hcCCCCCCEEEEecCcCCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHhhHhh-----cCeeEEEEeccCccccccccc
Confidence 356788999999999999999999987 78889999999999999999886553 689999998865 355678
Q ss_pred ceeeEEeccccccCCChHHHHHHHHhcccCCcEEEEEeeccCCCCCcchHHHHHHHHHhhccCCccCCCHHHHHHHHHHC
Q 018740 248 SIDAVHAGAAIHCWSSPSTGVAEISRVLRPGGVFVGTTYIVDGPFNLIPFSRLLRQNMMQISGSYTFLSEREIEDLCRAC 327 (351)
Q Consensus 248 ~fD~V~~~~vl~h~~d~~~~l~~i~~~LkpgG~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~~ll~~a 327 (351)
.+|+|++. +.|..++..++.++.+.|||||.+++......- . ... + ... ...+..+.|+++
T Consensus 147 ~vDvVf~d--~~~~~~~~~~l~~~~r~LKpGG~lvI~ik~r~~-----d--------~~~-p-~~~--~~~~ev~~L~~~ 207 (233)
T 4df3_A 147 GVDGLYAD--VAQPEQAAIVVRNARFFLRDGGYMLMAIKARSI-----D--------VTT-E-PSE--VYKREIKTLMDG 207 (233)
T ss_dssp CEEEEEEC--CCCTTHHHHHHHHHHHHEEEEEEEEEEEECCHH-----H--------HHT-C-CCH--HHHHHHHHHHHT
T ss_pred eEEEEEEe--ccCChhHHHHHHHHHHhccCCCEEEEEEecccC-----C--------CCC-C-hHH--HHHHHHHHHHHC
Confidence 89999863 445567789999999999999999987543210 0 000 0 000 012345678899
Q ss_pred CCeEEEEEecCe----EEEEEEe
Q 018740 328 GLVDFKCTRNRG----FVMFTAT 346 (351)
Q Consensus 328 Gf~~v~~~~~g~----~~~~~a~ 346 (351)
||++++...... +.++.++
T Consensus 208 GF~l~e~i~L~pf~~~H~lv~~~ 230 (233)
T 4df3_A 208 GLEIKDVVHLDPFDRDHAMIYAV 230 (233)
T ss_dssp TCCEEEEEECTTTSTTEEEEEEC
T ss_pred CCEEEEEEccCCCCCceEEEEEE
Confidence 999988765433 5666664
No 112
>3q87_B N6 adenine specific DNA methylase; SAM-methyltransferase, methyltransferase, methylation, trans activator-transferase complex; HET: SAM; 2.00A {Encephalitozoon cuniculi}
Probab=99.69 E-value=3.4e-16 Score=131.40 Aligned_cols=116 Identities=16% Similarity=0.102 Sum_probs=98.3
Q ss_pred CCCCeEEEEcCccCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHhhhCCCCCCCeEEEEecCCCCCCCCCceeeEEec
Q 018740 176 VLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLPFASSSIDAVHAG 255 (351)
Q Consensus 176 ~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~g~~~~~i~~~~~d~~~lp~~~~~fD~V~~~ 255 (351)
.++.+|||+|||+|.++..+++.+ +|+|+|+|+.|++. . .++.++++|+.+ ++++++||+|+++
T Consensus 22 ~~~~~vLD~GcG~G~~~~~l~~~~---~v~gvD~s~~~~~~-------~-----~~~~~~~~d~~~-~~~~~~fD~i~~n 85 (170)
T 3q87_B 22 LEMKIVLDLGTSTGVITEQLRKRN---TVVSTDLNIRALES-------H-----RGGNLVRADLLC-SINQESVDVVVFN 85 (170)
T ss_dssp CCSCEEEEETCTTCHHHHHHTTTS---EEEEEESCHHHHHT-------C-----SSSCEEECSTTT-TBCGGGCSEEEEC
T ss_pred CCCCeEEEeccCccHHHHHHHhcC---cEEEEECCHHHHhc-------c-----cCCeEEECChhh-hcccCCCCEEEEC
Confidence 456799999999999999999887 99999999999987 1 468899999987 5666899999999
Q ss_pred cccccCCCh---------HHHHHHHHhcccCCcEEEEEeeccCCCCCcchHHHHHHHHHhhccCCccCCCHHHHHHHHHH
Q 018740 256 AAIHCWSSP---------STGVAEISRVLRPGGVFVGTTYIVDGPFNLIPFSRLLRQNMMQISGSYTFLSEREIEDLCRA 326 (351)
Q Consensus 256 ~vl~h~~d~---------~~~l~~i~~~LkpgG~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~~ll~~ 326 (351)
..+++.+++ ..+++++.+.| |||.+++..+.. ...+++.+++++
T Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-pgG~l~~~~~~~--------------------------~~~~~l~~~l~~ 138 (170)
T 3q87_B 86 PPYVPDTDDPIIGGGYLGREVIDRFVDAV-TVGMLYLLVIEA--------------------------NRPKEVLARLEE 138 (170)
T ss_dssp CCCBTTCCCTTTBCCGGGCHHHHHHHHHC-CSSEEEEEEEGG--------------------------GCHHHHHHHHHH
T ss_pred CCCccCCccccccCCcchHHHHHHHHhhC-CCCEEEEEEecC--------------------------CCHHHHHHHHHH
Confidence 998877665 57889999999 999999977542 146789999999
Q ss_pred CCCeEEEE
Q 018740 327 CGLVDFKC 334 (351)
Q Consensus 327 aGf~~v~~ 334 (351)
+||..+..
T Consensus 139 ~gf~~~~~ 146 (170)
T 3q87_B 139 RGYGTRIL 146 (170)
T ss_dssp TTCEEEEE
T ss_pred CCCcEEEE
Confidence 99988763
No 113
>1yb2_A Hypothetical protein TA0852; structural genomics, methyltransferase, thermoplasma acidoph midwest center for structural genomics, MCSG; 2.01A {Thermoplasma acidophilum} SCOP: c.66.1.13
Probab=99.69 E-value=2.6e-16 Score=142.48 Aligned_cols=135 Identities=19% Similarity=0.169 Sum_probs=106.6
Q ss_pred HHHHhccCCCCCCeEEEEcCccCHHHHHHHHh-CCCCeEEEEeCCHHHHHHHHHHHhhhCCCCCCCeEEEEecCCCCCCC
Q 018740 167 ELMKGYLKPVLGGNIIDASCGSGLFSRIFAKS-GLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLPFA 245 (351)
Q Consensus 167 ~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~-~~~~~v~gvD~s~~~~~~a~~~~~~~~g~~~~~i~~~~~d~~~lp~~ 245 (351)
..+...+...++.+|||+|||+|.++..+++. ++..+|+|+|+++.+++.+++++.... +..++.++.+|+.+ +++
T Consensus 100 ~~~~~~~~~~~~~~VLD~G~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~--g~~~v~~~~~d~~~-~~~ 176 (275)
T 1yb2_A 100 SYIIMRCGLRPGMDILEVGVGSGNMSSYILYALNGKGTLTVVERDEDNLKKAMDNLSEFY--DIGNVRTSRSDIAD-FIS 176 (275)
T ss_dssp ------CCCCTTCEEEEECCTTSHHHHHHHHHHTTSSEEEEECSCHHHHHHHHHHHHTTS--CCTTEEEECSCTTT-CCC
T ss_pred HHHHHHcCCCCcCEEEEecCCCCHHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhcC--CCCcEEEEECchhc-cCc
Confidence 45666677778889999999999999999987 556699999999999999999876530 14689999999987 566
Q ss_pred CCceeeEEeccccccCCChHHHHHHHHhcccCCcEEEEEeeccCCCCCcchHHHHHHHHHhhccCCccCCCHHHHHHHHH
Q 018740 246 SSSIDAVHAGAAIHCWSSPSTGVAEISRVLRPGGVFVGTTYIVDGPFNLIPFSRLLRQNMMQISGSYTFLSEREIEDLCR 325 (351)
Q Consensus 246 ~~~fD~V~~~~vl~h~~d~~~~l~~i~~~LkpgG~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~~ll~ 325 (351)
+++||+|++ |++++..+++++.++|+|||++++.++... ..+++.+.++
T Consensus 177 ~~~fD~Vi~-----~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~--------------------------~~~~~~~~l~ 225 (275)
T 1yb2_A 177 DQMYDAVIA-----DIPDPWNHVQKIASMMKPGSVATFYLPNFD--------------------------QSEKTVLSLS 225 (275)
T ss_dssp SCCEEEEEE-----CCSCGGGSHHHHHHTEEEEEEEEEEESSHH--------------------------HHHHHHHHSG
T ss_pred CCCccEEEE-----cCcCHHHHHHHHHHHcCCCCEEEEEeCCHH--------------------------HHHHHHHHHH
Confidence 788999997 678899999999999999999999876421 1245667778
Q ss_pred HCCCeEEEEE
Q 018740 326 ACGLVDFKCT 335 (351)
Q Consensus 326 ~aGf~~v~~~ 335 (351)
++||..++..
T Consensus 226 ~~Gf~~~~~~ 235 (275)
T 1yb2_A 226 ASGMHHLETV 235 (275)
T ss_dssp GGTEEEEEEE
T ss_pred HCCCeEEEEE
Confidence 8899877643
No 114
>2avn_A Ubiquinone/menaquinone biosynthesis methyltransfe related protein; ubiquinone/menaquinone biosynthesis methyltransferase-relate protein; HET: SAI; 2.35A {Thermotoga maritima} SCOP: c.66.1.41
Probab=99.69 E-value=1.7e-16 Score=142.26 Aligned_cols=153 Identities=23% Similarity=0.303 Sum_probs=112.5
Q ss_pred HHHHhccCCCCCCeEEEEcCccCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHhhhCCCCCCCeEEEEecCCCCCCCC
Q 018740 167 ELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLPFAS 246 (351)
Q Consensus 167 ~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~g~~~~~i~~~~~d~~~lp~~~ 246 (351)
+.+...+. ++.+|||||||+|.++..+++.+. +++|+|+|+.+++.++++.. . .++++|+.++++++
T Consensus 46 ~~l~~~~~--~~~~vLDiGcG~G~~~~~l~~~~~--~v~gvD~s~~~l~~a~~~~~--------~-~~~~~d~~~~~~~~ 112 (260)
T 2avn_A 46 SFLEEYLK--NPCRVLDLGGGTGKWSLFLQERGF--EVVLVDPSKEMLEVAREKGV--------K-NVVEAKAEDLPFPS 112 (260)
T ss_dssp HHHHHHCC--SCCEEEEETCTTCHHHHHHHTTTC--EEEEEESCHHHHHHHHHHTC--------S-CEEECCTTSCCSCT
T ss_pred HHHHHhcC--CCCeEEEeCCCcCHHHHHHHHcCC--eEEEEeCCHHHHHHHHhhcC--------C-CEEECcHHHCCCCC
Confidence 44455554 578999999999999999999865 99999999999999998732 1 28899999999888
Q ss_pred CceeeEEeccccccC-CChHHHHHHHHhcccCCcEEEEEeeccCCCCCc---chHHHHHHHHHhhc--c--C-----Ccc
Q 018740 247 SSIDAVHAGAAIHCW-SSPSTGVAEISRVLRPGGVFVGTTYIVDGPFNL---IPFSRLLRQNMMQI--S--G-----SYT 313 (351)
Q Consensus 247 ~~fD~V~~~~vl~h~-~d~~~~l~~i~~~LkpgG~li~~~~~~~~~~~~---~~~~~~~~~~~~~~--~--~-----~~~ 313 (351)
++||+|++..+++|+ +++..+|+++.++|+|||.+++.+++....... ...+.......... . . ...
T Consensus 113 ~~fD~v~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (260)
T 2avn_A 113 GAFEAVLALGDVLSYVENKDKAFSEIRRVLVPDGLLIATVDNFYTFLQQMIEKDAWDQITRFLKTQTTSVGTTLFSFNSY 192 (260)
T ss_dssp TCEEEEEECSSHHHHCSCHHHHHHHHHHHEEEEEEEEEEEEBHHHHHHHHHHTTCHHHHHHHHHHCEEEEECSSEEEEEE
T ss_pred CCEEEEEEcchhhhccccHHHHHHHHHHHcCCCeEEEEEeCChHHHHHHhhcchhHHHHHHHHhccccccCCCceeEEEe
Confidence 999999999877766 789999999999999999999998874210000 00001111111110 0 0 112
Q ss_pred CCCHHHHHHHHHHCCCeEEEEE
Q 018740 314 FLSEREIEDLCRACGLVDFKCT 335 (351)
Q Consensus 314 ~~s~~~l~~ll~~aGf~~v~~~ 335 (351)
+++.+++.++ +||++++..
T Consensus 193 ~~~~~~l~~l---aGf~~~~~~ 211 (260)
T 2avn_A 193 AFKPEDLDSL---EGFETVDIR 211 (260)
T ss_dssp CBCGGGGSSC---TTEEEEEEE
T ss_pred ccCHHHHHHh---cCceEEEEE
Confidence 6789999888 999988754
No 115
>1nt2_A Fibrillarin-like PRE-rRNA processing protein; adeMet, binding motif, RNA binding protein; HET: SAM; 2.90A {Archaeoglobus fulgidus} SCOP: c.66.1.3
Probab=99.69 E-value=8.8e-16 Score=133.40 Aligned_cols=145 Identities=14% Similarity=0.095 Sum_probs=102.8
Q ss_pred cCCCCCCeEEEEcCccCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHhhhCCCCCCCeEEEEecCCCC----CCCCCc
Q 018740 173 LKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRL----PFASSS 248 (351)
Q Consensus 173 l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~g~~~~~i~~~~~d~~~l----p~~~~~ 248 (351)
+...++.+|||+|||+|.++..+++..+..+|+|+|+|+.|++.+.+..... .++.++.+|+... ++. ++
T Consensus 53 ~~~~~g~~VLDlGcGtG~~~~~la~~~~~~~V~gvD~s~~~l~~~~~~a~~~-----~~v~~~~~d~~~~~~~~~~~-~~ 126 (210)
T 1nt2_A 53 LKLRGDERVLYLGAASGTTVSHLADIVDEGIIYAVEYSAKPFEKLLELVRER-----NNIIPLLFDASKPWKYSGIV-EK 126 (210)
T ss_dssp CCCCSSCEEEEETCTTSHHHHHHHHHTTTSEEEEECCCHHHHHHHHHHHHHC-----SSEEEECSCTTCGGGTTTTC-CC
T ss_pred cCCCCCCEEEEECCcCCHHHHHHHHHcCCCEEEEEECCHHHHHHHHHHHhcC-----CCeEEEEcCCCCchhhcccc-cc
Confidence 3455688999999999999999998864569999999999887776655432 5788999998763 444 78
Q ss_pred eeeEEeccccccCCChHHHHHHHHhcccCCcEEEEEeeccCCCCCcchHHHHHHHHHhhccCCccCCCHHHHH----HHH
Q 018740 249 IDAVHAGAAIHCWSSPSTGVAEISRVLRPGGVFVGTTYIVDGPFNLIPFSRLLRQNMMQISGSYTFLSEREIE----DLC 324 (351)
Q Consensus 249 fD~V~~~~vl~h~~d~~~~l~~i~~~LkpgG~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~----~ll 324 (351)
||+|++.. .++ .+...++++++++|||||.+++...... . . ...+.+++. +.+
T Consensus 127 fD~V~~~~-~~~-~~~~~~l~~~~r~LkpgG~l~i~~~~~~----------------~----~-~~~~~~~~~~~~~~~l 183 (210)
T 1nt2_A 127 VDLIYQDI-AQK-NQIEILKANAEFFLKEKGEVVIMVKARS----------------I----D-STAEPEEVFKSVLKEM 183 (210)
T ss_dssp EEEEEECC-CST-THHHHHHHHHHHHEEEEEEEEEEEEHHH----------------H----C-TTSCHHHHHHHHHHHH
T ss_pred eeEEEEec-cCh-hHHHHHHHHHHHHhCCCCEEEEEEecCC----------------c----c-ccCCHHHHHHHHHHHH
Confidence 99999872 222 2234568999999999999999854310 0 1 112344432 237
Q ss_pred HHCCCeEEEEEecC----eEEEEEEec
Q 018740 325 RACGLVDFKCTRNR----GFVMFTATK 347 (351)
Q Consensus 325 ~~aGf~~v~~~~~g----~~~~~~a~k 347 (351)
+++ |++++..... .+.+++++|
T Consensus 184 ~~~-f~~~~~~~~~p~~~~h~~~~~~~ 209 (210)
T 1nt2_A 184 EGD-FKIVKHGSLMPYHRDHIFIHAYR 209 (210)
T ss_dssp HTT-SEEEEEEECTTTCTTEEEEEEEE
T ss_pred Hhh-cEEeeeecCCCCCCCcEEEEEEc
Confidence 888 9999876552 346666665
No 116
>1yzh_A TRNA (guanine-N(7)-)-methyltransferase; alpha-beta-alpha sandwich, S-adenosylmeth dependent, structural genomics, PSI; 2.02A {Streptococcus pneumoniae} SCOP: c.66.1.53
Probab=99.69 E-value=5.7e-16 Score=134.80 Aligned_cols=108 Identities=19% Similarity=0.131 Sum_probs=91.8
Q ss_pred CCCeEEEEcCccCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHhhhCCCCCCCeEEEEecCCCCC--CCCCceeeEEe
Q 018740 177 LGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLP--FASSSIDAVHA 254 (351)
Q Consensus 177 ~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~g~~~~~i~~~~~d~~~lp--~~~~~fD~V~~ 254 (351)
++.+|||||||+|.++..+++..+..+++|+|+|+.+++.|++++... + ..++.++++|+..++ +++++||+|++
T Consensus 41 ~~~~vLDiGcG~G~~~~~la~~~p~~~v~gvD~s~~~l~~a~~~~~~~-~--~~~v~~~~~d~~~~~~~~~~~~~D~i~~ 117 (214)
T 1yzh_A 41 DNPIHVEVGSGKGAFVSGMAKQNPDINYIGIDIQKSVLSYALDKVLEV-G--VPNIKLLWVDGSDLTDYFEDGEIDRLYL 117 (214)
T ss_dssp CCCEEEEESCTTSHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHH-C--CSSEEEEECCSSCGGGTSCTTCCSEEEE
T ss_pred CCCeEEEEccCcCHHHHHHHHHCCCCCEEEEEcCHHHHHHHHHHHHHc-C--CCCEEEEeCCHHHHHhhcCCCCCCEEEE
Confidence 467999999999999999999987789999999999999999998876 2 368999999999877 77889999999
Q ss_pred ccccccCC--------ChHHHHHHHHhcccCCcEEEEEeec
Q 018740 255 GAAIHCWS--------SPSTGVAEISRVLRPGGVFVGTTYI 287 (351)
Q Consensus 255 ~~vl~h~~--------d~~~~l~~i~~~LkpgG~li~~~~~ 287 (351)
+....+.. ....+++++.++|+|||.+++.+..
T Consensus 118 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 158 (214)
T 1yzh_A 118 NFSDPWPKKRHEKRRLTYKTFLDTFKRILPENGEIHFKTDN 158 (214)
T ss_dssp ESCCCCCSGGGGGGSTTSHHHHHHHHHHSCTTCEEEEEESC
T ss_pred ECCCCccccchhhhccCCHHHHHHHHHHcCCCcEEEEEeCC
Confidence 86543322 1257999999999999999997643
No 117
>1xdz_A Methyltransferase GIDB; MCSG, protein structure initiative, structural genomics, methyltransferase fold, PSI; 1.60A {Bacillus subtilis} SCOP: c.66.1.20
Probab=99.69 E-value=3.3e-16 Score=138.87 Aligned_cols=129 Identities=15% Similarity=0.011 Sum_probs=104.0
Q ss_pred CCCCeEEEEcCccCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHhhhCCCCCCCeEEEEecCCCCCCC---CCceeeE
Q 018740 176 VLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLPFA---SSSIDAV 252 (351)
Q Consensus 176 ~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~g~~~~~i~~~~~d~~~lp~~---~~~fD~V 252 (351)
.++.+|||||||+|..+..++...+..+|+|+|+|+.|++.+++++... | ..+++++++|+.++++. +++||+|
T Consensus 69 ~~~~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~-~--~~~v~~~~~d~~~~~~~~~~~~~fD~V 145 (240)
T 1xdz_A 69 NQVNTICDVGAGAGFPSLPIKICFPHLHVTIVDSLNKRITFLEKLSEAL-Q--LENTTFCHDRAETFGQRKDVRESYDIV 145 (240)
T ss_dssp GGCCEEEEECSSSCTTHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHH-T--CSSEEEEESCHHHHTTCTTTTTCEEEE
T ss_pred CCCCEEEEecCCCCHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHc-C--CCCEEEEeccHHHhcccccccCCccEE
Confidence 3577999999999999999997666679999999999999999988876 2 35799999999887753 5789999
Q ss_pred EeccccccCCChHHHHHHHHhcccCCcEEEEEeeccCCCCCcchHHHHHHHHHhhccCCccCCCHHHHHHHHHHCCCeEE
Q 018740 253 HAGAAIHCWSSPSTGVAEISRVLRPGGVFVGTTYIVDGPFNLIPFSRLLRQNMMQISGSYTFLSEREIEDLCRACGLVDF 332 (351)
Q Consensus 253 ~~~~vl~h~~d~~~~l~~i~~~LkpgG~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~~ll~~aGf~~v 332 (351)
++.. +.++..+++++.++|+|||.+++..... .. . ..+++.+.++++||.++
T Consensus 146 ~~~~----~~~~~~~l~~~~~~LkpgG~l~~~~g~~------~~--~----------------~~~~~~~~l~~~g~~~~ 197 (240)
T 1xdz_A 146 TARA----VARLSVLSELCLPLVKKNGLFVALKAAS------AE--E----------------ELNAGKKAITTLGGELE 197 (240)
T ss_dssp EEEC----CSCHHHHHHHHGGGEEEEEEEEEEECC-------CH--H----------------HHHHHHHHHHHTTEEEE
T ss_pred EEec----cCCHHHHHHHHHHhcCCCCEEEEEeCCC------ch--H----------------HHHHHHHHHHHcCCeEe
Confidence 9876 4678999999999999999998853210 00 0 12467788999999887
Q ss_pred EEE
Q 018740 333 KCT 335 (351)
Q Consensus 333 ~~~ 335 (351)
+..
T Consensus 198 ~~~ 200 (240)
T 1xdz_A 198 NIH 200 (240)
T ss_dssp EEE
T ss_pred EEE
Confidence 743
No 118
>2pwy_A TRNA (adenine-N(1)-)-methyltransferase; mtase, adoMet, TRMI, tRNA-M1A58; HET: SAH; 1.70A {Thermus thermophilus}
Probab=99.69 E-value=1.1e-15 Score=136.37 Aligned_cols=138 Identities=18% Similarity=0.160 Sum_probs=113.0
Q ss_pred HHHHHHHHhccCCCCCCeEEEEcCccCHHHHHHHHh-CCCCeEEEEeCCHHHHHHHHHHHhhhCCCCCCCeEEEEecCCC
Q 018740 163 EKEFELMKGYLKPVLGGNIIDASCGSGLFSRIFAKS-GLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISR 241 (351)
Q Consensus 163 ~~~~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~-~~~~~v~gvD~s~~~~~~a~~~~~~~~g~~~~~i~~~~~d~~~ 241 (351)
......+...+...++.+|||+|||+|.++..+++. ++..+|+++|+++.+++.+++++....| ..++.+..+|+.+
T Consensus 82 ~~~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~g--~~~v~~~~~d~~~ 159 (258)
T 2pwy_A 82 PKDASAMVTLLDLAPGMRVLEAGTGSGGLTLFLARAVGEKGLVESYEARPHHLAQAERNVRAFWQ--VENVRFHLGKLEE 159 (258)
T ss_dssp HHHHHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHCC--CCCEEEEESCGGG
T ss_pred chHHHHHHHHcCCCCCCEEEEECCCcCHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHhcC--CCCEEEEECchhh
Confidence 334456677777778899999999999999999998 6667999999999999999998765301 4689999999998
Q ss_pred CCCCCCceeeEEeccccccCCChHHHHHHHHhcccCCcEEEEEeeccCCCCCcchHHHHHHHHHhhccCCccCCCHHHHH
Q 018740 242 LPFASSSIDAVHAGAAIHCWSSPSTGVAEISRVLRPGGVFVGTTYIVDGPFNLIPFSRLLRQNMMQISGSYTFLSEREIE 321 (351)
Q Consensus 242 lp~~~~~fD~V~~~~vl~h~~d~~~~l~~i~~~LkpgG~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~ 321 (351)
.++++++||+|++ +++++..+++++.++|+|||.+++.++..+ ...++.
T Consensus 160 ~~~~~~~~D~v~~-----~~~~~~~~l~~~~~~L~~gG~l~~~~~~~~--------------------------~~~~~~ 208 (258)
T 2pwy_A 160 AELEEAAYDGVAL-----DLMEPWKVLEKAALALKPDRFLVAYLPNIT--------------------------QVLELV 208 (258)
T ss_dssp CCCCTTCEEEEEE-----ESSCGGGGHHHHHHHEEEEEEEEEEESCHH--------------------------HHHHHH
T ss_pred cCCCCCCcCEEEE-----CCcCHHHHHHHHHHhCCCCCEEEEEeCCHH--------------------------HHHHHH
Confidence 8777889999997 567888999999999999999999876421 123566
Q ss_pred HHHHHCCCeEEE
Q 018740 322 DLCRACGLVDFK 333 (351)
Q Consensus 322 ~ll~~aGf~~v~ 333 (351)
+.++++||..++
T Consensus 209 ~~l~~~gf~~~~ 220 (258)
T 2pwy_A 209 RAAEAHPFRLER 220 (258)
T ss_dssp HHHTTTTEEEEE
T ss_pred HHHHHCCCceEE
Confidence 777889998766
No 119
>3bgv_A MRNA CAP guanine-N7 methyltransferase; alternative splicing, mRNA capping, mRNA processing, nucleus, phosphoprotein, RNA-binding; HET: SAH; 2.30A {Homo sapiens} PDB: 3epp_A*
Probab=99.69 E-value=3.2e-16 Score=144.45 Aligned_cols=153 Identities=18% Similarity=0.178 Sum_probs=113.1
Q ss_pred CCCeEEEEcCccCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHhhhCC----CCCCCeEEEEecCCCCC----CC--C
Q 018740 177 LGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESN----FPKENFLLVRADISRLP----FA--S 246 (351)
Q Consensus 177 ~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~g----~~~~~i~~~~~d~~~lp----~~--~ 246 (351)
++.+|||+|||+|.++..+++.. ..+++|+|+|+.|++.++++...... ....++.++++|+..++ ++ +
T Consensus 34 ~~~~VLDlGcG~G~~~~~l~~~~-~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~ 112 (313)
T 3bgv_A 34 RDITVLDLGCGKGGDLLKWKKGR-INKLVCTDIADVSVKQCQQRYEDMKNRRDSEYIFSAEFITADSSKELLIDKFRDPQ 112 (313)
T ss_dssp -CCEEEEETCTTTTTHHHHHHTT-CSEEEEEESCHHHHHHHHHHHHHHHSSSCC-CCCEEEEEECCTTTSCSTTTCSSTT
T ss_pred CCCEEEEECCCCcHHHHHHHhcC-CCEEEEEeCCHHHHHHHHHHHHHhhhcccccccceEEEEEecccccchhhhcccCC
Confidence 46799999999999999998753 56999999999999999998765300 01347999999998876 53 4
Q ss_pred CceeeEEeccccccC-CC---hHHHHHHHHhcccCCcEEEEEeeccCCCCCcchHHHHHHHH-------------Hh---
Q 018740 247 SSIDAVHAGAAIHCW-SS---PSTGVAEISRVLRPGGVFVGTTYIVDGPFNLIPFSRLLRQN-------------MM--- 306 (351)
Q Consensus 247 ~~fD~V~~~~vl~h~-~d---~~~~l~~i~~~LkpgG~li~~~~~~~~~~~~~~~~~~~~~~-------------~~--- 306 (351)
++||+|++..++||+ .+ +..+|+++.++|+|||.+++.+++.+. ....+... +.
T Consensus 113 ~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~~~~~~------l~~~~~~~~~~~~~~~~~~~~f~~~~ 186 (313)
T 3bgv_A 113 MCFDICSCQFVCHYSFESYEQADMMLRNACERLSPGGYFIGTTPNSFE------LIRRLEASETESFGNEIYTVKFQKKG 186 (313)
T ss_dssp CCEEEEEEETCGGGGGGSHHHHHHHHHHHHTTEEEEEEEEEEEECHHH------HHHHHTTSSSSEEECSSEEEEESCSS
T ss_pred CCEEEEEEecchhhccCCHHHHHHHHHHHHHHhCCCcEEEEecCChHH------HHHHHHhhccCccCCeeEEEEeCCCC
Confidence 589999999999988 44 469999999999999999999886421 00000000 00
Q ss_pred ---------------hccCCccCCCHHHHHHHHHHCCCeEEEEEe
Q 018740 307 ---------------QISGSYTFLSEREIEDLCRACGLVDFKCTR 336 (351)
Q Consensus 307 ---------------~~~~~~~~~s~~~l~~ll~~aGf~~v~~~~ 336 (351)
.........+.+++.+++++.||+++....
T Consensus 187 ~~~~~~~~~~f~l~~~~~~~~~~~~~~~~~~l~~~~G~~~v~~~~ 231 (313)
T 3bgv_A 187 DYPLFGCKYDFNLEGVVDVPEFLVYFPLLNEMAKKYNMKLVYKKT 231 (313)
T ss_dssp CCCSSCCEEEEEEC---CCEEECCCHHHHHHHGGGGTEEEEEEEE
T ss_pred CCCCccceEEEEECCcccCcceEEcHHHHHHHHHHcCcEEEEecC
Confidence 000012246789999999999999988654
No 120
>2yxd_A Probable cobalt-precorrin-6Y C(15)-methyltransfer [decarboxylating]; alpha and beta protein (A/B) class; HET: MES; 2.30A {Methanocaldococcus jannaschii}
Probab=99.68 E-value=1.7e-15 Score=127.64 Aligned_cols=133 Identities=16% Similarity=0.203 Sum_probs=109.5
Q ss_pred HHHHHHHHhccCCCCCCeEEEEcCccCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHhhhCCCCCCCeEEEEecCCCC
Q 018740 163 EKEFELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRL 242 (351)
Q Consensus 163 ~~~~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~g~~~~~i~~~~~d~~~l 242 (351)
....+.+...+...++.+|||+|||+|.++..+++. ..+++|+|+|+.+++.+++++... + ..++.++.+|+.+
T Consensus 21 ~~~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~--~~~v~~vD~~~~~~~~a~~~~~~~-~--~~~~~~~~~d~~~- 94 (183)
T 2yxd_A 21 EEIRAVSIGKLNLNKDDVVVDVGCGSGGMTVEIAKR--CKFVYAIDYLDGAIEVTKQNLAKF-N--IKNCQIIKGRAED- 94 (183)
T ss_dssp HHHHHHHHHHHCCCTTCEEEEESCCCSHHHHHHHTT--SSEEEEEECSHHHHHHHHHHHHHT-T--CCSEEEEESCHHH-
T ss_pred HHHHHHHHHHcCCCCCCEEEEeCCCCCHHHHHHHhc--CCeEEEEeCCHHHHHHHHHHHHHc-C--CCcEEEEECCccc-
Confidence 444556677777777889999999999999999983 459999999999999999998776 2 3689999999977
Q ss_pred CCCCCceeeEEeccccccCCChHHHHHHHHhcccCCcEEEEEeeccCCCCCcchHHHHHHHHHhhccCCccCCCHHHHHH
Q 018740 243 PFASSSIDAVHAGAAIHCWSSPSTGVAEISRVLRPGGVFVGTTYIVDGPFNLIPFSRLLRQNMMQISGSYTFLSEREIED 322 (351)
Q Consensus 243 p~~~~~fD~V~~~~vl~h~~d~~~~l~~i~~~LkpgG~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~~ 322 (351)
++++++||+|++..+ .++..+++++.++ |||.+++.++..+ +..++.+
T Consensus 95 ~~~~~~~D~i~~~~~----~~~~~~l~~~~~~--~gG~l~~~~~~~~--------------------------~~~~~~~ 142 (183)
T 2yxd_A 95 VLDKLEFNKAFIGGT----KNIEKIIEILDKK--KINHIVANTIVLE--------------------------NAAKIIN 142 (183)
T ss_dssp HGGGCCCSEEEECSC----SCHHHHHHHHHHT--TCCEEEEEESCHH--------------------------HHHHHHH
T ss_pred cccCCCCcEEEECCc----ccHHHHHHHHhhC--CCCEEEEEecccc--------------------------cHHHHHH
Confidence 666788999999888 6788999999999 9999999876421 1356888
Q ss_pred HHHHCCCeEEE
Q 018740 323 LCRACGLVDFK 333 (351)
Q Consensus 323 ll~~aGf~~v~ 333 (351)
.++++||.+..
T Consensus 143 ~l~~~g~~~~~ 153 (183)
T 2yxd_A 143 EFESRGYNVDA 153 (183)
T ss_dssp HHHHTTCEEEE
T ss_pred HHHHcCCeEEE
Confidence 99999986544
No 121
>3evz_A Methyltransferase; NYSGXRC, NEW YORK SGX research CE structural genomics, protein structure initiative, pyrococc furiosus, PSI-2; 2.20A {Pyrococcus furiosus}
Probab=99.68 E-value=1.9e-15 Score=132.78 Aligned_cols=130 Identities=13% Similarity=0.067 Sum_probs=103.2
Q ss_pred CCCCCeEEEEcCc-cCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHhhhCCCCCCCeEEEEecCCCC-CCCCCceeeE
Q 018740 175 PVLGGNIIDASCG-SGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRL-PFASSSIDAV 252 (351)
Q Consensus 175 ~~~~~~vLDiGcG-~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~g~~~~~i~~~~~d~~~l-p~~~~~fD~V 252 (351)
..++.+|||+||| +|.++..+++.. ..+|+|+|+|+.+++.|++++... ..+++++++|+..+ ++++++||+|
T Consensus 53 ~~~~~~vLDlG~G~~G~~~~~la~~~-~~~v~~vD~s~~~~~~a~~~~~~~----~~~v~~~~~d~~~~~~~~~~~fD~I 127 (230)
T 3evz_A 53 LRGGEVALEIGTGHTAMMALMAEKFF-NCKVTATEVDEEFFEYARRNIERN----NSNVRLVKSNGGIIKGVVEGTFDVI 127 (230)
T ss_dssp CCSSCEEEEECCTTTCHHHHHHHHHH-CCEEEEEECCHHHHHHHHHHHHHT----TCCCEEEECSSCSSTTTCCSCEEEE
T ss_pred cCCCCEEEEcCCCHHHHHHHHHHHhc-CCEEEEEECCHHHHHHHHHHHHHh----CCCcEEEeCCchhhhhcccCceeEE
Confidence 3457899999999 999999999984 349999999999999999998877 33899999997543 4556899999
Q ss_pred EeccccccCCC-------------------hHHHHHHHHhcccCCcEEEEEeeccCCCCCcchHHHHHHHHHhhccCCcc
Q 018740 253 HAGAAIHCWSS-------------------PSTGVAEISRVLRPGGVFVGTTYIVDGPFNLIPFSRLLRQNMMQISGSYT 313 (351)
Q Consensus 253 ~~~~vl~h~~d-------------------~~~~l~~i~~~LkpgG~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 313 (351)
+++-.+++..+ ...+++++.++|+|||.+++..+...
T Consensus 128 ~~npp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~------------------------ 183 (230)
T 3evz_A 128 FSAPPYYDKPLGRVLTEREAIGGGKYGEEFSVKLLEEAFDHLNPGGKVALYLPDKE------------------------ 183 (230)
T ss_dssp EECCCCC---------------CCSSSCHHHHHHHHHHGGGEEEEEEEEEEEESCH------------------------
T ss_pred EECCCCcCCccccccChhhhhccCccchHHHHHHHHHHHHHhCCCeEEEEEecccH------------------------
Confidence 99876655433 36889999999999999999765420
Q ss_pred CCCHHHHHHHHHHCCCeEEEE
Q 018740 314 FLSEREIEDLCRACGLVDFKC 334 (351)
Q Consensus 314 ~~s~~~l~~ll~~aGf~~v~~ 334 (351)
...+++.+++++.||.+...
T Consensus 184 -~~~~~~~~~l~~~g~~~~~~ 203 (230)
T 3evz_A 184 -KLLNVIKERGIKLGYSVKDI 203 (230)
T ss_dssp -HHHHHHHHHHHHTTCEEEEE
T ss_pred -hHHHHHHHHHHHcCCceEEE
Confidence 12467889999999976653
No 122
>3p2e_A 16S rRNA methylase; methyltransferase, transferase, NPMA; HET: SAH; 1.68A {Escherichia coli} PDB: 3p2i_A 3p2k_A* 3pb3_A* 3mte_A*
Probab=99.68 E-value=2e-16 Score=139.01 Aligned_cols=153 Identities=14% Similarity=0.109 Sum_probs=99.3
Q ss_pred CCCCeEEEEcCccCHHHHHHHHhCCCCeEEEEeCC-HHHHHHH---HHHHhhhCCCCCCCeEEEEecCCCCCCC-CCcee
Q 018740 176 VLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYS-ENMLKQC---YEFVQQESNFPKENFLLVRADISRLPFA-SSSID 250 (351)
Q Consensus 176 ~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s-~~~~~~a---~~~~~~~~g~~~~~i~~~~~d~~~lp~~-~~~fD 250 (351)
.++.+|||||||+|.++..+++..+..+|+|+|+| +.|++.| ++++... +..++.++++|+..+|.. .+.+|
T Consensus 23 ~~~~~vLDiGCG~G~~~~~la~~~~~~~v~GvD~s~~~ml~~A~~A~~~~~~~---~~~~v~~~~~d~~~l~~~~~d~v~ 99 (225)
T 3p2e_A 23 QFDRVHIDLGTGDGRNIYKLAINDQNTFYIGIDPVKENLFDISKKIIKKPSKG---GLSNVVFVIAAAESLPFELKNIAD 99 (225)
T ss_dssp TCSEEEEEETCTTSHHHHHHHHTCTTEEEEEECSCCGGGHHHHHHHTSCGGGT---CCSSEEEECCBTTBCCGGGTTCEE
T ss_pred CCCCEEEEEeccCcHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHHHHHc---CCCCeEEEEcCHHHhhhhccCeEE
Confidence 35779999999999999999987777799999999 7777776 6665544 246899999999998632 14455
Q ss_pred eEEecccc----cc-CCChHHHHHHHHhcccCCcEEEEEeeccCCCCCcchHHHHHHHHHhhccCCccCCCHHHHHHHHH
Q 018740 251 AVHAGAAI----HC-WSSPSTGVAEISRVLRPGGVFVGTTYIVDGPFNLIPFSRLLRQNMMQISGSYTFLSEREIEDLCR 325 (351)
Q Consensus 251 ~V~~~~vl----~h-~~d~~~~l~~i~~~LkpgG~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~~ll~ 325 (351)
.|.++... +| ..++..+|++++++|||||.+++.....+. ....++. .. .... ....++..+++.++++
T Consensus 100 ~i~~~~~~~~~~~~~~~~~~~~l~~~~r~LkpGG~l~i~~~~~~~-~~~~~~~--~~-~~~~--~~~~~~~~~el~~~l~ 173 (225)
T 3p2e_A 100 SISILFPWGTLLEYVIKPNRDILSNVADLAKKEAHFEFVTTYSDS-YEEAEIK--KR-GLPL--LSKAYFLSEQYKAELS 173 (225)
T ss_dssp EEEEESCCHHHHHHHHTTCHHHHHHHHTTEEEEEEEEEEECCCC--------------------CCHHHHHSHHHHHHHH
T ss_pred EEEEeCCCcHHhhhhhcchHHHHHHHHHhcCCCcEEEEEEecccc-chhchhh--hc-CCCC--CChhhcchHHHHHHHH
Confidence 55544321 11 134467899999999999999995443332 1111100 00 0000 0011122235999999
Q ss_pred HCCCeEEEEEec
Q 018740 326 ACGLVDFKCTRN 337 (351)
Q Consensus 326 ~aGf~~v~~~~~ 337 (351)
++||++.+....
T Consensus 174 ~aGf~v~~~~~~ 185 (225)
T 3p2e_A 174 NSGFRIDDVKEL 185 (225)
T ss_dssp HHTCEEEEEEEE
T ss_pred HcCCCeeeeeec
Confidence 999998875543
No 123
>2fca_A TRNA (guanine-N(7)-)-methyltransferase; 2.10A {Bacillus subtilis} SCOP: c.66.1.53
Probab=99.66 E-value=7.7e-16 Score=134.05 Aligned_cols=108 Identities=17% Similarity=0.124 Sum_probs=90.2
Q ss_pred CCCeEEEEcCccCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHhhhCCCCCCCeEEEEecCCCCC--CCCCceeeEEe
Q 018740 177 LGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLP--FASSSIDAVHA 254 (351)
Q Consensus 177 ~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~g~~~~~i~~~~~d~~~lp--~~~~~fD~V~~ 254 (351)
++.+|||||||+|.++..+++..+..+++|+|+|+.+++.|++++... + ..++.++++|+.+++ +++++||.|++
T Consensus 38 ~~~~vLDiGcG~G~~~~~la~~~p~~~v~giD~s~~~l~~a~~~~~~~-~--~~nv~~~~~d~~~l~~~~~~~~~d~v~~ 114 (213)
T 2fca_A 38 DNPIHIEVGTGKGQFISGMAKQNPDINYIGIELFKSVIVTAVQKVKDS-E--AQNVKLLNIDADTLTDVFEPGEVKRVYL 114 (213)
T ss_dssp CCCEEEEECCTTSHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHS-C--CSSEEEECCCGGGHHHHCCTTSCCEEEE
T ss_pred CCceEEEEecCCCHHHHHHHHHCCCCCEEEEEechHHHHHHHHHHHHc-C--CCCEEEEeCCHHHHHhhcCcCCcCEEEE
Confidence 467999999999999999999987789999999999999999998776 2 468999999998876 67889999987
Q ss_pred ccccccCCC--------hHHHHHHHHhcccCCcEEEEEeec
Q 018740 255 GAAIHCWSS--------PSTGVAEISRVLRPGGVFVGTTYI 287 (351)
Q Consensus 255 ~~vl~h~~d--------~~~~l~~i~~~LkpgG~li~~~~~ 287 (351)
+....+... ...+++++.++|+|||.+++.+..
T Consensus 115 ~~~~p~~~~~~~~~rl~~~~~l~~~~~~LkpgG~l~~~td~ 155 (213)
T 2fca_A 115 NFSDPWPKKRHEKRRLTYSHFLKKYEEVMGKGGSIHFKTDN 155 (213)
T ss_dssp ESCCCCCSGGGGGGSTTSHHHHHHHHHHHTTSCEEEEEESC
T ss_pred ECCCCCcCccccccccCcHHHHHHHHHHcCCCCEEEEEeCC
Confidence 654322211 257899999999999999997643
No 124
>3mb5_A SAM-dependent methyltransferase; RNA methyltransferase, M1A, TRMI, intermolecular contacts, R specificity, tetramer, disulfide bond; HET: SAM; 1.60A {Pyrococcus abyssi} PDB: 3lga_A* 3lhd_C*
Probab=99.66 E-value=1.2e-15 Score=136.28 Aligned_cols=137 Identities=23% Similarity=0.334 Sum_probs=112.1
Q ss_pred HHHHHHHHhccCCCCCCeEEEEcCccCHHHHHHHHh-CCCCeEEEEeCCHHHHHHHHHHHhhhCCCCCCCeEEEEecCCC
Q 018740 163 EKEFELMKGYLKPVLGGNIIDASCGSGLFSRIFAKS-GLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISR 241 (351)
Q Consensus 163 ~~~~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~-~~~~~v~gvD~s~~~~~~a~~~~~~~~g~~~~~i~~~~~d~~~ 241 (351)
......+...+...++.+|||+|||+|.++..+++. ++..+++++|+|+.+++.|++++... |. ..++.++.+|+.+
T Consensus 79 ~~~~~~i~~~~~~~~~~~vldiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~-~~-~~~v~~~~~d~~~ 156 (255)
T 3mb5_A 79 PKDAALIVAYAGISPGDFIVEAGVGSGALTLFLANIVGPEGRVVSYEIREDFAKLAWENIKWA-GF-DDRVTIKLKDIYE 156 (255)
T ss_dssp HHHHHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHH-TC-TTTEEEECSCGGG
T ss_pred HhHHHHHHHhhCCCCCCEEEEecCCchHHHHHHHHHhCCCeEEEEEecCHHHHHHHHHHHHHc-CC-CCceEEEECchhh
Confidence 444567777778888999999999999999999998 76779999999999999999998876 22 2349999999986
Q ss_pred CCCCCCceeeEEeccccccCCChHHHHHHHHhcccCCcEEEEEeeccCCCCCcchHHHHHHHHHhhccCCccCCCHHHHH
Q 018740 242 LPFASSSIDAVHAGAAIHCWSSPSTGVAEISRVLRPGGVFVGTTYIVDGPFNLIPFSRLLRQNMMQISGSYTFLSEREIE 321 (351)
Q Consensus 242 lp~~~~~fD~V~~~~vl~h~~d~~~~l~~i~~~LkpgG~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~ 321 (351)
. +++++||+|++ +.+++..+++++.++|+|||.+++..+..+ ...++.
T Consensus 157 ~-~~~~~~D~v~~-----~~~~~~~~l~~~~~~L~~gG~l~~~~~~~~--------------------------~~~~~~ 204 (255)
T 3mb5_A 157 G-IEEENVDHVIL-----DLPQPERVVEHAAKALKPGGFFVAYTPCSN--------------------------QVMRLH 204 (255)
T ss_dssp C-CCCCSEEEEEE-----CSSCGGGGHHHHHHHEEEEEEEEEEESSHH--------------------------HHHHHH
T ss_pred c-cCCCCcCEEEE-----CCCCHHHHHHHHHHHcCCCCEEEEEECCHH--------------------------HHHHHH
Confidence 4 56788999997 567888999999999999999999765421 134667
Q ss_pred HHHHHCC--CeEEE
Q 018740 322 DLCRACG--LVDFK 333 (351)
Q Consensus 322 ~ll~~aG--f~~v~ 333 (351)
+.+++.| |..++
T Consensus 205 ~~l~~~g~~f~~~~ 218 (255)
T 3mb5_A 205 EKLREFKDYFMKPR 218 (255)
T ss_dssp HHHHHTGGGBSCCE
T ss_pred HHHHHcCCCccccE
Confidence 7888888 86655
No 125
>3p9n_A Possible methyltransferase (methylase); RV2966C, adoMet binding, RNA methylase, RSMD, SAM-fold, RNA methyltransferase; 1.90A {Mycobacterium tuberculosis}
Probab=99.66 E-value=5.3e-16 Score=132.25 Aligned_cols=110 Identities=16% Similarity=0.115 Sum_probs=94.0
Q ss_pred CCCCeEEEEcCccCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHhhhCCCCCCCeEEEEecCCCCC--CCCCceeeEE
Q 018740 176 VLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLP--FASSSIDAVH 253 (351)
Q Consensus 176 ~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~g~~~~~i~~~~~d~~~lp--~~~~~fD~V~ 253 (351)
.++.+|||+|||+|.++..++..+ ..+|+|+|+|+.+++.|++++... + ..+++++++|+.+++ +++++||+|+
T Consensus 43 ~~~~~vLDlgcG~G~~~~~~~~~~-~~~v~~vD~~~~~~~~a~~~~~~~-~--~~~v~~~~~d~~~~~~~~~~~~fD~i~ 118 (189)
T 3p9n_A 43 LTGLAVLDLYAGSGALGLEALSRG-AASVLFVESDQRSAAVIARNIEAL-G--LSGATLRRGAVAAVVAAGTTSPVDLVL 118 (189)
T ss_dssp CTTCEEEEETCTTCHHHHHHHHTT-CSEEEEEECCHHHHHHHHHHHHHH-T--CSCEEEEESCHHHHHHHCCSSCCSEEE
T ss_pred CCCCEEEEeCCCcCHHHHHHHHCC-CCeEEEEECCHHHHHHHHHHHHHc-C--CCceEEEEccHHHHHhhccCCCccEEE
Confidence 457899999999999999887765 358999999999999999998877 2 368999999998764 3468899999
Q ss_pred eccccccC-CChHHHHHHHHh--cccCCcEEEEEeeccC
Q 018740 254 AGAAIHCW-SSPSTGVAEISR--VLRPGGVFVGTTYIVD 289 (351)
Q Consensus 254 ~~~vl~h~-~d~~~~l~~i~~--~LkpgG~li~~~~~~~ 289 (351)
+...+++. .+...+++++.+ +|+|||++++......
T Consensus 119 ~~~p~~~~~~~~~~~l~~~~~~~~L~pgG~l~~~~~~~~ 157 (189)
T 3p9n_A 119 ADPPYNVDSADVDAILAALGTNGWTREGTVAVVERATTC 157 (189)
T ss_dssp ECCCTTSCHHHHHHHHHHHHHSSSCCTTCEEEEEEETTS
T ss_pred ECCCCCcchhhHHHHHHHHHhcCccCCCeEEEEEecCCC
Confidence 99887775 577899999999 9999999999887654
No 126
>4dzr_A Protein-(glutamine-N5) methyltransferase, release specific; structural genomics, PSI-biology; 2.55A {Alicyclobacillus acidocaldarius subsp}
Probab=99.66 E-value=4.9e-17 Score=140.79 Aligned_cols=153 Identities=17% Similarity=0.022 Sum_probs=96.9
Q ss_pred HHHHHhccCC-CCCCeEEEEcCccCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHhhhCCCCCCCeEEEEecCCCCCC
Q 018740 166 FELMKGYLKP-VLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLPF 244 (351)
Q Consensus 166 ~~~l~~~l~~-~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~g~~~~~i~~~~~d~~~lp~ 244 (351)
.+.+.+.+.. .++.+|||+|||+|.++..+++.++..+++|+|+|+.+++.+++++... ..++.++++|+.+ ++
T Consensus 18 ~~~~~~~l~~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~~~~~~~~a~~~~~~~----~~~~~~~~~d~~~-~~ 92 (215)
T 4dzr_A 18 VEEAIRFLKRMPSGTRVIDVGTGSGCIAVSIALACPGVSVTAVDLSMDALAVARRNAERF----GAVVDWAAADGIE-WL 92 (215)
T ss_dssp HHHHHHHHTTCCTTEEEEEEESSBCHHHHHHHHHCTTEEEEEEECC-----------------------CCHHHHHH-HH
T ss_pred HHHHHHHhhhcCCCCEEEEecCCHhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHHh----CCceEEEEcchHh-hh
Confidence 3455555544 5678999999999999999999987779999999999999999987765 2278889999877 55
Q ss_pred CC-----CceeeEEecccccc------CCCh--------------------HHHHHHHHhcccCCcEEEEEeeccCCCCC
Q 018740 245 AS-----SSIDAVHAGAAIHC------WSSP--------------------STGVAEISRVLRPGGVFVGTTYIVDGPFN 293 (351)
Q Consensus 245 ~~-----~~fD~V~~~~vl~h------~~d~--------------------~~~l~~i~~~LkpgG~li~~~~~~~~~~~ 293 (351)
++ ++||+|+++..+++ +... ..+++++.++|+|||++++....
T Consensus 93 ~~~~~~~~~fD~i~~npp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~------ 166 (215)
T 4dzr_A 93 IERAERGRPWHAIVSNPPYIPTGEIDQLEPSVRDYEPRLALDGGEDGLQFYRRMAALPPYVLARGRAGVFLEVG------ 166 (215)
T ss_dssp HHHHHTTCCBSEEEECCCCCC------------------------CTTHHHHHHHTCCGGGBCSSSEEEEEECT------
T ss_pred hhhhhccCcccEEEECCCCCCCccccccChhhhccCccccccCCCcHHHHHHHHHHHHHHHhcCCCeEEEEEEC------
Confidence 54 89999999644433 2211 67889999999999994443221
Q ss_pred cchHHHHHHHHHhhccCCccCCCHHHHHHHHH--HCCCeEEEEEe--cCeEEEEEEecCC
Q 018740 294 LIPFSRLLRQNMMQISGSYTFLSEREIEDLCR--ACGLVDFKCTR--NRGFVMFTATKPS 349 (351)
Q Consensus 294 ~~~~~~~~~~~~~~~~~~~~~~s~~~l~~ll~--~aGf~~v~~~~--~g~~~~~~a~kp~ 349 (351)
....+.+.++++ +.||..++... .+...++.++|+.
T Consensus 167 --------------------~~~~~~~~~~l~~~~~gf~~~~~~~~~~~~~r~~~~~~~~ 206 (215)
T 4dzr_A 167 --------------------HNQADEVARLFAPWRERGFRVRKVKDLRGIDRVIAVTREP 206 (215)
T ss_dssp --------------------TSCHHHHHHHTGGGGGGTEECCEEECTTSCEEEEEEEECC
T ss_pred --------------------CccHHHHHHHHHHhhcCCceEEEEEecCCCEEEEEEEEcC
Confidence 124567888899 99998776443 3455566666543
No 127
>2ipx_A RRNA 2'-O-methyltransferase fibrillarin; FBL, structural genomics, structural genomics consortium, SGC; HET: MTA; 1.82A {Homo sapiens}
Probab=99.66 E-value=1.6e-15 Score=133.74 Aligned_cols=152 Identities=14% Similarity=0.104 Sum_probs=107.9
Q ss_pred ccCCCCCCeEEEEcCccCHHHHHHHHh-CCCCeEEEEeCCHHHHHHHHHHHhhhCCCCCCCeEEEEecCCC---CCCCCC
Q 018740 172 YLKPVLGGNIIDASCGSGLFSRIFAKS-GLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISR---LPFASS 247 (351)
Q Consensus 172 ~l~~~~~~~vLDiGcG~G~~~~~l~~~-~~~~~v~gvD~s~~~~~~a~~~~~~~~g~~~~~i~~~~~d~~~---lp~~~~ 247 (351)
.+...++.+|||+|||+|.++..+++. ++..+|+|+|+|+.+++.+.+.+... .++.++.+|+.+ +++.++
T Consensus 72 ~~~~~~~~~vLDlG~G~G~~~~~la~~~g~~~~v~gvD~s~~~i~~~~~~a~~~-----~~v~~~~~d~~~~~~~~~~~~ 146 (233)
T 2ipx_A 72 QIHIKPGAKVLYLGAASGTTVSHVSDIVGPDGLVYAVEFSHRSGRDLINLAKKR-----TNIIPVIEDARHPHKYRMLIA 146 (233)
T ss_dssp CCCCCTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEECCCHHHHHHHHHHHHHC-----TTEEEECSCTTCGGGGGGGCC
T ss_pred eecCCCCCEEEEEcccCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHhhcc-----CCeEEEEcccCChhhhcccCC
Confidence 344566889999999999999999987 35569999999999888887766553 689999999987 455678
Q ss_pred ceeeEEeccccccCCCh-HHHHHHHHhcccCCcEEEEEeeccCCCCCcchHHHHHHHHHhhccCCccCCCHHHHHHHHHH
Q 018740 248 SIDAVHAGAAIHCWSSP-STGVAEISRVLRPGGVFVGTTYIVDGPFNLIPFSRLLRQNMMQISGSYTFLSEREIEDLCRA 326 (351)
Q Consensus 248 ~fD~V~~~~vl~h~~d~-~~~l~~i~~~LkpgG~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~~ll~~ 326 (351)
+||+|++... .++. ..++.++.++|||||++++.......... .+. ...+.. + .++|++
T Consensus 147 ~~D~V~~~~~---~~~~~~~~~~~~~~~LkpgG~l~i~~~~~~~~~~-~~~--------------~~~~~~-~-~~~l~~ 206 (233)
T 2ipx_A 147 MVDVIFADVA---QPDQTRIVALNAHTFLRNGGHFVISIKANCIDST-ASA--------------EAVFAS-E-VKKMQQ 206 (233)
T ss_dssp CEEEEEECCC---CTTHHHHHHHHHHHHEEEEEEEEEEEEHHHHCSS-SCH--------------HHHHHH-H-HHTTGG
T ss_pred cEEEEEEcCC---CccHHHHHHHHHHHHcCCCeEEEEEEcccccccC-CCH--------------HHHHHH-H-HHHHHH
Confidence 9999998544 2233 45688999999999999996554210000 000 001122 3 488899
Q ss_pred CCCeEEEEEecC----eEEEEEEecC
Q 018740 327 CGLVDFKCTRNR----GFVMFTATKP 348 (351)
Q Consensus 327 aGf~~v~~~~~g----~~~~~~a~kp 348 (351)
+||++++..... .+.++.++++
T Consensus 207 ~Gf~~~~~~~~~~~~~~~~~v~~~~~ 232 (233)
T 2ipx_A 207 ENMKPQEQLTLEPYERDHAVVVGVYR 232 (233)
T ss_dssp GTEEEEEEEECTTTSSSEEEEEEEEC
T ss_pred CCCceEEEEecCCccCCcEEEEEEeC
Confidence 999998854432 2566666654
No 128
>3lbf_A Protein-L-isoaspartate O-methyltransferase; modified rossman-type fold, S-adenosyl-L- methionine; HET: SAH; 1.80A {Escherichia coli}
Probab=99.65 E-value=1.5e-15 Score=131.57 Aligned_cols=113 Identities=18% Similarity=0.102 Sum_probs=98.0
Q ss_pred HHHHHHHhccCCCCCCeEEEEcCccCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHhhhCCCCCCCeEEEEecCCCCC
Q 018740 164 KEFELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLP 243 (351)
Q Consensus 164 ~~~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~g~~~~~i~~~~~d~~~lp 243 (351)
.....+...+...++.+|||+|||+|.++..+++.+. +|+|+|+|+.+++.+++++... + ..++.++.+|+.+.+
T Consensus 64 ~~~~~~~~~l~~~~~~~vLdiG~G~G~~~~~la~~~~--~v~~vD~~~~~~~~a~~~~~~~-~--~~~v~~~~~d~~~~~ 138 (210)
T 3lbf_A 64 YMVARMTELLELTPQSRVLEIGTGSGYQTAILAHLVQ--HVCSVERIKGLQWQARRRLKNL-D--LHNVSTRHGDGWQGW 138 (210)
T ss_dssp HHHHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHHSS--EEEEEESCHHHHHHHHHHHHHT-T--CCSEEEEESCGGGCC
T ss_pred HHHHHHHHhcCCCCCCEEEEEcCCCCHHHHHHHHhCC--EEEEEecCHHHHHHHHHHHHHc-C--CCceEEEECCcccCC
Confidence 3345666777777889999999999999999999854 9999999999999999998876 2 358999999998876
Q ss_pred CCCCceeeEEeccccccCCChHHHHHHHHhcccCCcEEEEEeec
Q 018740 244 FASSSIDAVHAGAAIHCWSSPSTGVAEISRVLRPGGVFVGTTYI 287 (351)
Q Consensus 244 ~~~~~fD~V~~~~vl~h~~d~~~~l~~i~~~LkpgG~li~~~~~ 287 (351)
..+++||+|++..+++|+++ ++.++|+|||++++..+.
T Consensus 139 ~~~~~~D~i~~~~~~~~~~~------~~~~~L~pgG~lv~~~~~ 176 (210)
T 3lbf_A 139 QARAPFDAIIVTAAPPEIPT------ALMTQLDEGGILVLPVGE 176 (210)
T ss_dssp GGGCCEEEEEESSBCSSCCT------HHHHTEEEEEEEEEEECS
T ss_pred ccCCCccEEEEccchhhhhH------HHHHhcccCcEEEEEEcC
Confidence 66789999999999999976 578999999999998776
No 129
>3iv6_A Putative Zn-dependent alcohol dehydrogenase; alpha/beta fold, rossmann-fold, structural genomics, PSI-2, structure initiative; HET: SAM; 2.70A {Rhodobacter sphaeroides}
Probab=99.65 E-value=8.1e-16 Score=137.46 Aligned_cols=110 Identities=14% Similarity=0.137 Sum_probs=89.6
Q ss_pred HHHHHhccCCCCCCeEEEEcCccCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHhhhCCCCCCCeEEEEecCCCCCC-
Q 018740 166 FELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLPF- 244 (351)
Q Consensus 166 ~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~g~~~~~i~~~~~d~~~lp~- 244 (351)
.+.+...+...++.+|||||||+|.++..+++.+. +|+|+|+|+.|++.|++++... ++..++.+++.
T Consensus 34 ~~~il~~l~l~~g~~VLDlGcGtG~~a~~La~~g~--~V~gvD~S~~ml~~Ar~~~~~~---------~v~~~~~~~~~~ 102 (261)
T 3iv6_A 34 RENDIFLENIVPGSTVAVIGASTRFLIEKALERGA--SVTVFDFSQRMCDDLAEALADR---------CVTIDLLDITAE 102 (261)
T ss_dssp HHHHHHTTTCCTTCEEEEECTTCHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHTSSS---------CCEEEECCTTSC
T ss_pred HHHHHHhcCCCCcCEEEEEeCcchHHHHHHHhcCC--EEEEEECCHHHHHHHHHHHHhc---------cceeeeeecccc
Confidence 45666777777889999999999999999999876 9999999999999999985432 23444444332
Q ss_pred ----CCCceeeEEeccccccCCC--hHHHHHHHHhcccCCcEEEEEeec
Q 018740 245 ----ASSSIDAVHAGAAIHCWSS--PSTGVAEISRVLRPGGVFVGTTYI 287 (351)
Q Consensus 245 ----~~~~fD~V~~~~vl~h~~d--~~~~l~~i~~~LkpgG~li~~~~~ 287 (351)
.+++||+|++..+++|+.. ...+++++.++| |||+++++...
T Consensus 103 ~~~~~~~~fD~Vv~~~~l~~~~~~~~~~~l~~l~~lL-PGG~l~lS~~~ 150 (261)
T 3iv6_A 103 IPKELAGHFDFVLNDRLINRFTTEEARRACLGMLSLV-GSGTVRASVKL 150 (261)
T ss_dssp CCGGGTTCCSEEEEESCGGGSCHHHHHHHHHHHHHHH-TTSEEEEEEEB
T ss_pred cccccCCCccEEEEhhhhHhCCHHHHHHHHHHHHHhC-cCcEEEEEecc
Confidence 2578999999999999864 457899999999 99999998754
No 130
>3mti_A RRNA methylase; SAM-dependent, PSI, MCSG, structural genomics, midwest cente structural genomics, protein structure initiative; 1.95A {Streptococcus thermophilus} PDB: 3lby_A*
Probab=99.64 E-value=1.1e-15 Score=129.72 Aligned_cols=107 Identities=20% Similarity=0.185 Sum_probs=85.7
Q ss_pred CCCCeEEEEcCccCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHhhhCCCCCCCeEEEEecCCCCC-CCCCceeeEEe
Q 018740 176 VLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLP-FASSSIDAVHA 254 (351)
Q Consensus 176 ~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~g~~~~~i~~~~~d~~~lp-~~~~~fD~V~~ 254 (351)
.++.+|||+|||+|.++..+++.+ .+|+|+|+|+.|++.|++++... + ..++++++.+...++ +.+++||+|++
T Consensus 21 ~~~~~vLDiGcG~G~~~~~la~~~--~~v~~vD~s~~~l~~a~~~~~~~-~--~~~v~~~~~~~~~l~~~~~~~fD~v~~ 95 (185)
T 3mti_A 21 DDESIVVDATMGNGNDTAFLAGLS--KKVYAFDVQEQALGKTSQRLSDL-G--IENTELILDGHENLDHYVREPIRAAIF 95 (185)
T ss_dssp CTTCEEEESCCTTSHHHHHHHTTS--SEEEEEESCHHHHHHHHHHHHHH-T--CCCEEEEESCGGGGGGTCCSCEEEEEE
T ss_pred CCCCEEEEEcCCCCHHHHHHHHhC--CEEEEEECCHHHHHHHHHHHHHc-C--CCcEEEEeCcHHHHHhhccCCcCEEEE
Confidence 357899999999999999999884 49999999999999999998876 2 378999998887753 44788999998
Q ss_pred c-ccccc-------C-CChHHHHHHHHhcccCCcEEEEEeec
Q 018740 255 G-AAIHC-------W-SSPSTGVAEISRVLRPGGVFVGTTYI 287 (351)
Q Consensus 255 ~-~vl~h-------~-~d~~~~l~~i~~~LkpgG~li~~~~~ 287 (351)
+ ..+++ . .+...+++++.++|||||.+++..+.
T Consensus 96 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~ 137 (185)
T 3mti_A 96 NLGYLPSADKSVITKPHTTLEAIEKILDRLEVGGRLAIMIYY 137 (185)
T ss_dssp EEC-----------CHHHHHHHHHHHHHHEEEEEEEEEEEC-
T ss_pred eCCCCCCcchhcccChhhHHHHHHHHHHhcCCCcEEEEEEeC
Confidence 7 33332 1 23357889999999999999998764
No 131
>1jsx_A Glucose-inhibited division protein B; methyltransferase fold, structural genomics, PSI, protein structure initiative; 2.40A {Escherichia coli} SCOP: c.66.1.20
Probab=99.64 E-value=1.5e-15 Score=131.03 Aligned_cols=100 Identities=19% Similarity=0.194 Sum_probs=87.0
Q ss_pred CCCeEEEEcCccCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHhhhCCCCCCCeEEEEecCCCCCCCCCceeeEEecc
Q 018740 177 LGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLPFASSSIDAVHAGA 256 (351)
Q Consensus 177 ~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~g~~~~~i~~~~~d~~~lp~~~~~fD~V~~~~ 256 (351)
++.+|||+|||+|.++..++...+..+++|+|+|+.+++.+++++... + ..++.++.+|+.+++ +.++||+|++..
T Consensus 65 ~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~-~--~~~v~~~~~d~~~~~-~~~~~D~i~~~~ 140 (207)
T 1jsx_A 65 QGERFIDVGTGPGLPGIPLSIVRPEAHFTLLDSLGKRVRFLRQVQHEL-K--LENIEPVQSRVEEFP-SEPPFDGVISRA 140 (207)
T ss_dssp CSSEEEEETCTTTTTHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHT-T--CSSEEEEECCTTTSC-CCSCEEEEECSC
T ss_pred CCCeEEEECCCCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHc-C--CCCeEEEecchhhCC-ccCCcCEEEEec
Confidence 367999999999999999999876779999999999999999988775 2 346999999998876 457899999754
Q ss_pred ccccCCChHHHHHHHHhcccCCcEEEEE
Q 018740 257 AIHCWSSPSTGVAEISRVLRPGGVFVGT 284 (351)
Q Consensus 257 vl~h~~d~~~~l~~i~~~LkpgG~li~~ 284 (351)
+.++..+++++.++|+|||.+++.
T Consensus 141 ----~~~~~~~l~~~~~~L~~gG~l~~~ 164 (207)
T 1jsx_A 141 ----FASLNDMVSWCHHLPGEQGRFYAL 164 (207)
T ss_dssp ----SSSHHHHHHHHTTSEEEEEEEEEE
T ss_pred ----cCCHHHHHHHHHHhcCCCcEEEEE
Confidence 356789999999999999999986
No 132
>3fzg_A 16S rRNA methylase; methyltransferase, plasmid, transferase; HET: SAM; 2.00A {Escherichia coli}
Probab=99.63 E-value=1.4e-15 Score=127.74 Aligned_cols=115 Identities=9% Similarity=0.095 Sum_probs=93.8
Q ss_pred HHHHHHHHhccCCCCCCeEEEEcCccCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHhhhCCCCCCCeEEEEecCCCC
Q 018740 163 EKEFELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRL 242 (351)
Q Consensus 163 ~~~~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~g~~~~~i~~~~~d~~~l 242 (351)
+...+.+..++.. ..+|||+|||+|.++..++...|..+|+++|+|+.|++.+++++... |. ..++.+ +|....
T Consensus 37 d~fY~~~~~~l~~--~~~VLDlGCG~GplAl~l~~~~p~a~~~A~Di~~~~leiar~~~~~~-g~-~~~v~~--~d~~~~ 110 (200)
T 3fzg_A 37 NDFYTYVFGNIKH--VSSILDFGCGFNPLALYQWNENEKIIYHAYDIDRAEIAFLSSIIGKL-KT-TIKYRF--LNKESD 110 (200)
T ss_dssp HHHHHHHHHHSCC--CSEEEEETCTTHHHHHHHHCSSCCCEEEEECSCHHHHHHHHHHHHHS-CC-SSEEEE--ECCHHH
T ss_pred HHHHHHHHhhcCC--CCeEEEecCCCCHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHHhc-CC-CccEEE--eccccc
Confidence 4455666667644 77999999999999999999988889999999999999999998876 21 124555 666544
Q ss_pred CCCCCceeeEEeccccccCCChHHHHHHHHhcccCCcEEEEE
Q 018740 243 PFASSSIDAVHAGAAIHCWSSPSTGVAEISRVLRPGGVFVGT 284 (351)
Q Consensus 243 p~~~~~fD~V~~~~vl~h~~d~~~~l~~i~~~LkpgG~li~~ 284 (351)
.+.++||+|++..++||+.+.+..+.++.+.|+|||+++--
T Consensus 111 -~~~~~~DvVLa~k~LHlL~~~~~al~~v~~~L~pggvfISf 151 (200)
T 3fzg_A 111 -VYKGTYDVVFLLKMLPVLKQQDVNILDFLQLFHTQNFVISF 151 (200)
T ss_dssp -HTTSEEEEEEEETCHHHHHHTTCCHHHHHHTCEEEEEEEEE
T ss_pred -CCCCCcChhhHhhHHHhhhhhHHHHHHHHHHhCCCCEEEEe
Confidence 35688999999999999977778888999999999877643
No 133
>3lpm_A Putative methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium, nysgxrc; 2.40A {Listeria monocytogenes}
Probab=99.63 E-value=5.7e-15 Score=132.34 Aligned_cols=151 Identities=15% Similarity=0.190 Sum_probs=113.5
Q ss_pred HHHhccCCC-CCCeEEEEcCccCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHhhhCCCCCCCeEEEEecCCCCC--C
Q 018740 168 LMKGYLKPV-LGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLP--F 244 (351)
Q Consensus 168 ~l~~~l~~~-~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~g~~~~~i~~~~~d~~~lp--~ 244 (351)
.+..++... ++.+|||+|||+|.++..+++.++. +|+|+|+++.+++.|++++... +. ..++.++++|+.+++ +
T Consensus 39 ll~~~~~~~~~~~~vLDlG~G~G~~~~~la~~~~~-~v~gvDi~~~~~~~a~~n~~~~-~~-~~~v~~~~~D~~~~~~~~ 115 (259)
T 3lpm_A 39 LLAKFSYLPIRKGKIIDLCSGNGIIPLLLSTRTKA-KIVGVEIQERLADMAKRSVAYN-QL-EDQIEIIEYDLKKITDLI 115 (259)
T ss_dssp HHHHHCCCCSSCCEEEETTCTTTHHHHHHHTTCCC-EEEEECCSHHHHHHHHHHHHHT-TC-TTTEEEECSCGGGGGGTS
T ss_pred HHHHHhcCCCCCCEEEEcCCchhHHHHHHHHhcCC-cEEEEECCHHHHHHHHHHHHHC-CC-cccEEEEECcHHHhhhhh
Confidence 455556666 7889999999999999999998753 9999999999999999998876 22 347999999998875 4
Q ss_pred CCCceeeEEeccccccC-----C---------------ChHHHHHHHHhcccCCcEEEEEeeccCCCCCcchHHHHHHHH
Q 018740 245 ASSSIDAVHAGAAIHCW-----S---------------SPSTGVAEISRVLRPGGVFVGTTYIVDGPFNLIPFSRLLRQN 304 (351)
Q Consensus 245 ~~~~fD~V~~~~vl~h~-----~---------------d~~~~l~~i~~~LkpgG~li~~~~~~~~~~~~~~~~~~~~~~ 304 (351)
++++||+|+++-.+.+. . +...+++++.++|+|||++++..+.
T Consensus 116 ~~~~fD~Ii~npPy~~~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~----------------- 178 (259)
T 3lpm_A 116 PKERADIVTCNPPYFATPDTSLKNTNEHFRIARHEVMCTLEDTIRVAASLLKQGGKANFVHRP----------------- 178 (259)
T ss_dssp CTTCEEEEEECCCC-----------------------HHHHHHHHHHHHHEEEEEEEEEEECT-----------------
T ss_pred ccCCccEEEECCCCCCCccccCCCCchHHHhhhccccCCHHHHHHHHHHHccCCcEEEEEEcH-----------------
Confidence 57899999997544322 1 2357899999999999999985321
Q ss_pred HhhccCCccCCCHHHHHHHHHHCCCeEEEEEec-------CeEEEEEEecC
Q 018740 305 MMQISGSYTFLSEREIEDLCRACGLVDFKCTRN-------RGFVMFTATKP 348 (351)
Q Consensus 305 ~~~~~~~~~~~s~~~l~~ll~~aGf~~v~~~~~-------g~~~~~~a~kp 348 (351)
....++..++++.||........ ...+++.++|.
T Consensus 179 ----------~~~~~~~~~l~~~~~~~~~~~~v~~~~~~~~~~~l~~~~k~ 219 (259)
T 3lpm_A 179 ----------ERLLDIIDIMRKYRLEPKRIQFVHPRSDREANTVLVEGIKD 219 (259)
T ss_dssp ----------TTHHHHHHHHHHTTEEEEEEEEEESSTTSCCSEEEEEEEET
T ss_pred ----------HHHHHHHHHHHHCCCceEEEEEeecCCCCCcEEEEEEEEeC
Confidence 13457888899999987663221 23455666654
No 134
>3id6_C Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; C/D guide RNA, 2'-O-methylation, coiled-coil, methyltransfer binding, rRNA processing; HET: SAM; 2.60A {Sulfolobus solfataricus} SCOP: c.66.1.0 PDB: 3id5_B* 3pla_E*
Probab=99.63 E-value=2.2e-14 Score=125.90 Aligned_cols=157 Identities=9% Similarity=0.019 Sum_probs=107.7
Q ss_pred HHHHhcc---CCCCCCeEEEEcCccCHHHHHHHHh-CCCCeEEEEeCCHHHHHHHHHHHhhhCCCCCCCeEEEEecCCCC
Q 018740 167 ELMKGYL---KPVLGGNIIDASCGSGLFSRIFAKS-GLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRL 242 (351)
Q Consensus 167 ~~l~~~l---~~~~~~~vLDiGcG~G~~~~~l~~~-~~~~~v~gvD~s~~~~~~a~~~~~~~~g~~~~~i~~~~~d~~~l 242 (351)
..+...+ ...++.+|||+|||+|.++..+++. ++.++|+|+|+|+.|++...+.... ..++.++.+|+...
T Consensus 63 ~~ll~~l~~~~l~~g~~VLDlG~GtG~~t~~la~~v~~~G~V~avD~s~~~l~~l~~~a~~-----r~nv~~i~~Da~~~ 137 (232)
T 3id6_C 63 GAILKGLKTNPIRKGTKVLYLGAASGTTISHVSDIIELNGKAYGVEFSPRVVRELLLVAQR-----RPNIFPLLADARFP 137 (232)
T ss_dssp HHHHTTCSCCSCCTTCEEEEETCTTSHHHHHHHHHHTTTSEEEEEECCHHHHHHHHHHHHH-----CTTEEEEECCTTCG
T ss_pred HHHHhhhhhcCCCCCCEEEEEeecCCHHHHHHHHHhCCCCEEEEEECcHHHHHHHHHHhhh-----cCCeEEEEcccccc
Confidence 4454444 3678999999999999999999876 5567999999999987665544433 36899999999764
Q ss_pred C---CCCCceeeEEeccccccCCChHHHH-HHHHhcccCCcEEEEEeeccCCCCCcchHHHHHHHHHhhccCCccCCCHH
Q 018740 243 P---FASSSIDAVHAGAAIHCWSSPSTGV-AEISRVLRPGGVFVGTTYIVDGPFNLIPFSRLLRQNMMQISGSYTFLSER 318 (351)
Q Consensus 243 p---~~~~~fD~V~~~~vl~h~~d~~~~l-~~i~~~LkpgG~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~ 318 (351)
. ...++||+|++.... ++....+ ..+.+.|||||.++++.....-. . . .. .... .+
T Consensus 138 ~~~~~~~~~~D~I~~d~a~---~~~~~il~~~~~~~LkpGG~lvisik~~~~d-~------------t-~~-~~e~--~~ 197 (232)
T 3id6_C 138 QSYKSVVENVDVLYVDIAQ---PDQTDIAIYNAKFFLKVNGDMLLVIKARSID-V------------T-KD-PKEI--YK 197 (232)
T ss_dssp GGTTTTCCCEEEEEECCCC---TTHHHHHHHHHHHHEEEEEEEEEEEC---------------------CC-SSSS--TT
T ss_pred hhhhccccceEEEEecCCC---hhHHHHHHHHHHHhCCCCeEEEEEEccCCcc-c------------C-CC-HHHH--HH
Confidence 3 124689999987553 5655555 45566999999999975432100 0 0 00 0111 13
Q ss_pred HHHHHHHHCCCeEEEEEecC----eEEEEEEecC
Q 018740 319 EIEDLCRACGLVDFKCTRNR----GFVMFTATKP 348 (351)
Q Consensus 319 ~l~~ll~~aGf~~v~~~~~g----~~~~~~a~kp 348 (351)
+....|+++||++++..... .+.+++++|+
T Consensus 198 ~~~~~L~~~gf~~~~~~~l~p~~~~h~~v~~~~~ 231 (232)
T 3id6_C 198 TEVEKLENSNFETIQIINLDPYDKDHAIVLSKYK 231 (232)
T ss_dssp HHHHHHHHTTEEEEEEEECTTTCSSCEEEEEEEC
T ss_pred HHHHHHHHCCCEEEEEeccCCCcCceEEEEEEeC
Confidence 45678888999999977653 3577777765
No 135
>1o54_A SAM-dependent O-methyltransferase; TM0748, structural genomi PSI, protein structure initiative, joint center for structu genomics; 1.65A {Thermotoga maritima} SCOP: c.66.1.13
Probab=99.63 E-value=4.6e-15 Score=134.28 Aligned_cols=136 Identities=21% Similarity=0.249 Sum_probs=110.0
Q ss_pred HHHHHHHhccCCCCCCeEEEEcCccCHHHHHHHHh-CCCCeEEEEeCCHHHHHHHHHHHhhhCCCCCCCeEEEEecCCCC
Q 018740 164 KEFELMKGYLKPVLGGNIIDASCGSGLFSRIFAKS-GLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRL 242 (351)
Q Consensus 164 ~~~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~-~~~~~v~gvD~s~~~~~~a~~~~~~~~g~~~~~i~~~~~d~~~l 242 (351)
.....+...+...++.+|||+|||+|.++..+++. ++..+|+++|+|+.+++.|++++... +. ..++.++.+|+.+.
T Consensus 99 ~~~~~i~~~~~~~~~~~VLDiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~-~~-~~~v~~~~~d~~~~ 176 (277)
T 1o54_A 99 KDSSFIAMMLDVKEGDRIIDTGVGSGAMCAVLARAVGSSGKVFAYEKREEFAKLAESNLTKW-GL-IERVTIKVRDISEG 176 (277)
T ss_dssp HHHHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHHTTTTCEEEEECCCHHHHHHHHHHHHHT-TC-GGGEEEECCCGGGC
T ss_pred HHHHHHHHHhCCCCCCEEEEECCcCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHc-CC-CCCEEEEECCHHHc
Confidence 34456677777778899999999999999999998 66679999999999999999988765 11 25799999999776
Q ss_pred CCCCCceeeEEeccccccCCChHHHHHHHHhcccCCcEEEEEeeccCCCCCcchHHHHHHHHHhhccCCccCCCHHHHHH
Q 018740 243 PFASSSIDAVHAGAAIHCWSSPSTGVAEISRVLRPGGVFVGTTYIVDGPFNLIPFSRLLRQNMMQISGSYTFLSEREIED 322 (351)
Q Consensus 243 p~~~~~fD~V~~~~vl~h~~d~~~~l~~i~~~LkpgG~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~~ 322 (351)
+++++||+|++ +.+++..+++++.++|+|||.+++.++..+ ...++.+
T Consensus 177 -~~~~~~D~V~~-----~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~--------------------------~~~~~~~ 224 (277)
T 1o54_A 177 -FDEKDVDALFL-----DVPDPWNYIDKCWEALKGGGRFATVCPTTN--------------------------QVQETLK 224 (277)
T ss_dssp -CSCCSEEEEEE-----CCSCGGGTHHHHHHHEEEEEEEEEEESSHH--------------------------HHHHHHH
T ss_pred -ccCCccCEEEE-----CCcCHHHHHHHHHHHcCCCCEEEEEeCCHH--------------------------HHHHHHH
Confidence 56678999997 467888999999999999999999876421 1235666
Q ss_pred HHHHCCCeEEE
Q 018740 323 LCRACGLVDFK 333 (351)
Q Consensus 323 ll~~aGf~~v~ 333 (351)
.+++.||..++
T Consensus 225 ~l~~~gf~~~~ 235 (277)
T 1o54_A 225 KLQELPFIRIE 235 (277)
T ss_dssp HHHHSSEEEEE
T ss_pred HHHHCCCceeE
Confidence 77778887665
No 136
>3g89_A Ribosomal RNA small subunit methyltransferase G; 16S rRNA methyltransferase, translation, cytoplasm, rRNA processing; HET: HIC SAM AMP; 1.50A {Thermus thermophilus} PDB: 3g88_A* 3g8a_A* 3g8b_A*
Probab=99.62 E-value=4.4e-15 Score=132.34 Aligned_cols=130 Identities=10% Similarity=-0.087 Sum_probs=103.9
Q ss_pred CCCCCeEEEEcCccCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHhhhCCCCCCCeEEEEecCCCCCCC---CCceee
Q 018740 175 PVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLPFA---SSSIDA 251 (351)
Q Consensus 175 ~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~g~~~~~i~~~~~d~~~lp~~---~~~fD~ 251 (351)
..++.+|||||||+|..+..++...+..+|+++|+|+.+++.+++++... | ..++.++++|+++++.. +++||+
T Consensus 78 ~~~~~~vLDiG~G~G~~~i~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~-~--l~~v~~~~~d~~~~~~~~~~~~~fD~ 154 (249)
T 3g89_A 78 WQGPLRVLDLGTGAGFPGLPLKIVRPELELVLVDATRKKVAFVERAIEVL-G--LKGARALWGRAEVLAREAGHREAYAR 154 (249)
T ss_dssp CCSSCEEEEETCTTTTTHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHH-T--CSSEEEEECCHHHHTTSTTTTTCEEE
T ss_pred cCCCCEEEEEcCCCCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHh-C--CCceEEEECcHHHhhcccccCCCceE
Confidence 34578999999999999999999877789999999999999999998876 2 35799999999887643 478999
Q ss_pred EEeccccccCCChHHHHHHHHhcccCCcEEEEEeeccCCCCCcchHHHHHHHHHhhccCCccCCCHHHHHHHHHHCCCeE
Q 018740 252 VHAGAAIHCWSSPSTGVAEISRVLRPGGVFVGTTYIVDGPFNLIPFSRLLRQNMMQISGSYTFLSEREIEDLCRACGLVD 331 (351)
Q Consensus 252 V~~~~vl~h~~d~~~~l~~i~~~LkpgG~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~~ll~~aGf~~ 331 (351)
|++.. +.+...+++.+.++|+|||++++...... .. ...++...++..||.+
T Consensus 155 I~s~a----~~~~~~ll~~~~~~LkpgG~l~~~~g~~~--------~~----------------e~~~~~~~l~~~G~~~ 206 (249)
T 3g89_A 155 AVARA----VAPLCVLSELLLPFLEVGGAAVAMKGPRV--------EE----------------ELAPLPPALERLGGRL 206 (249)
T ss_dssp EEEES----SCCHHHHHHHHGGGEEEEEEEEEEECSCC--------HH----------------HHTTHHHHHHHHTEEE
T ss_pred EEECC----cCCHHHHHHHHHHHcCCCeEEEEEeCCCc--------HH----------------HHHHHHHHHHHcCCeE
Confidence 99864 35778999999999999999987542110 00 1235667788889988
Q ss_pred EEEE
Q 018740 332 FKCT 335 (351)
Q Consensus 332 v~~~ 335 (351)
.+..
T Consensus 207 ~~~~ 210 (249)
T 3g89_A 207 GEVL 210 (249)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 7744
No 137
>3dxy_A TRNA (guanine-N(7)-)-methyltransferase; rossmann fold methyltransferase, tRNA modification, S-adenosyl-L-methionine, TR processing; HET: SAM; 1.50A {Escherichia coli} PDB: 3dxx_A* 3dxz_A*
Probab=99.62 E-value=1.1e-15 Score=133.48 Aligned_cols=108 Identities=15% Similarity=0.091 Sum_probs=90.0
Q ss_pred CCCeEEEEcCccCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHhhhCCCCCCCeEEEEecCCCC-C--CCCCceeeEE
Q 018740 177 LGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRL-P--FASSSIDAVH 253 (351)
Q Consensus 177 ~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~g~~~~~i~~~~~d~~~l-p--~~~~~fD~V~ 253 (351)
++.+|||||||+|.++..+++..+...|+|+|+|+.+++.|++++... +..++.++++|+.++ + +++++||.|+
T Consensus 34 ~~~~vLDiGcG~G~~~~~lA~~~p~~~v~giD~s~~~l~~a~~~~~~~---~l~nv~~~~~Da~~~l~~~~~~~~~d~v~ 110 (218)
T 3dxy_A 34 EAPVTLEIGFGMGASLVAMAKDRPEQDFLGIEVHSPGVGACLASAHEE---GLSNLRVMCHDAVEVLHKMIPDNSLRMVQ 110 (218)
T ss_dssp CCCEEEEESCTTCHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHT---TCSSEEEECSCHHHHHHHHSCTTCEEEEE
T ss_pred CCCeEEEEeeeChHHHHHHHHHCCCCeEEEEEecHHHHHHHHHHHHHh---CCCcEEEEECCHHHHHHHHcCCCChheEE
Confidence 467999999999999999999988889999999999999999998766 246899999998774 3 6789999999
Q ss_pred eccccccCCCh--------HHHHHHHHhcccCCcEEEEEeec
Q 018740 254 AGAAIHCWSSP--------STGVAEISRVLRPGGVFVGTTYI 287 (351)
Q Consensus 254 ~~~vl~h~~d~--------~~~l~~i~~~LkpgG~li~~~~~ 287 (351)
+++...+.... ..+++++.++|||||.+++.+..
T Consensus 111 ~~~~~p~~~~~~~~rr~~~~~~l~~~~r~LkpGG~l~i~td~ 152 (218)
T 3dxy_A 111 LFFPDPWHKARHNKRRIVQVPFAELVKSKLQLGGVFHMATDW 152 (218)
T ss_dssp EESCCCCCSGGGGGGSSCSHHHHHHHHHHEEEEEEEEEEESC
T ss_pred EeCCCCccchhhhhhhhhhHHHHHHHHHHcCCCcEEEEEeCC
Confidence 87543322211 25899999999999999998754
No 138
>3eey_A Putative rRNA methylase; rRNA methylation, S-adenosyl-methionine, structural genomics structure initiative, PSI; HET: SAM; 2.20A {Clostridium thermocellum atcc 27405}
Probab=99.62 E-value=3.4e-15 Score=127.89 Aligned_cols=111 Identities=16% Similarity=0.274 Sum_probs=90.7
Q ss_pred CCCCeEEEEcCccCHHHHHHHHh-CCCCeEEEEeCCHHHHHHHHHHHhhhCCCCCCCeEEEEecCCCCC-CCCCceeeEE
Q 018740 176 VLGGNIIDASCGSGLFSRIFAKS-GLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLP-FASSSIDAVH 253 (351)
Q Consensus 176 ~~~~~vLDiGcG~G~~~~~l~~~-~~~~~v~gvD~s~~~~~~a~~~~~~~~g~~~~~i~~~~~d~~~lp-~~~~~fD~V~ 253 (351)
.++.+|||+|||+|.++..+++. ++..+|+|+|+|+.+++.|++++... |. ..++.++++|+.+++ +.+++||+|+
T Consensus 21 ~~~~~vLDlGcG~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~-~~-~~~v~~~~~d~~~~~~~~~~~fD~v~ 98 (197)
T 3eey_A 21 KEGDTVVDATCGNGNDTAFLASLVGENGRVFGFDIQDKAIANTTKKLTDL-NL-IDRVTLIKDGHQNMDKYIDCPVKAVM 98 (197)
T ss_dssp CTTCEEEESCCTTSHHHHHHHHHHCTTCEEEEECSCHHHHHHHHHHHHHT-TC-GGGEEEECSCGGGGGGTCCSCEEEEE
T ss_pred CCCCEEEEcCCCCCHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHc-CC-CCCeEEEECCHHHHhhhccCCceEEE
Confidence 45789999999999999999887 34569999999999999999998875 21 258999999998875 5668999999
Q ss_pred eccccc---------cCCChHHHHHHHHhcccCCcEEEEEeecc
Q 018740 254 AGAAIH---------CWSSPSTGVAEISRVLRPGGVFVGTTYIV 288 (351)
Q Consensus 254 ~~~vl~---------h~~d~~~~l~~i~~~LkpgG~li~~~~~~ 288 (351)
+...+. +..++..+++++.++|+|||.+++..+..
T Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Lk~gG~l~~~~~~~ 142 (197)
T 3eey_A 99 FNLGYLPSGDHSISTRPETTIQALSKAMELLVTGGIITVVIYYG 142 (197)
T ss_dssp EEESBCTTSCTTCBCCHHHHHHHHHHHHHHEEEEEEEEEEECCB
T ss_pred EcCCcccCcccccccCcccHHHHHHHHHHhCcCCCEEEEEEccC
Confidence 886551 11134579999999999999999987653
No 139
>2b25_A Hypothetical protein; structural genomics, methyl transferase, SAM, structural GEN consortium, SGC, transferase; HET: SAM; 2.50A {Homo sapiens} SCOP: c.66.1.13
Probab=99.62 E-value=3.1e-15 Score=139.27 Aligned_cols=120 Identities=19% Similarity=0.253 Sum_probs=92.7
Q ss_pred HHHHHHHhccCCCCCCeEEEEcCccCHHHHHHHHh-CCCCeEEEEeCCHHHHHHHHHHHhhhC------CC--CCCCeEE
Q 018740 164 KEFELMKGYLKPVLGGNIIDASCGSGLFSRIFAKS-GLFSLVVALDYSENMLKQCYEFVQQES------NF--PKENFLL 234 (351)
Q Consensus 164 ~~~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~-~~~~~v~gvD~s~~~~~~a~~~~~~~~------g~--~~~~i~~ 234 (351)
.....+...+...++.+|||+|||+|.++..+++. ++..+|+|+|+++.+++.|++++.... +. ...++.+
T Consensus 92 ~~~~~~l~~l~~~~g~~VLDiG~G~G~~~~~la~~~g~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~ln~~~~~~~~v~~ 171 (336)
T 2b25_A 92 KDINMILSMMDINPGDTVLEAGSGSGGMSLFLSKAVGSQGRVISFEVRKDHHDLAKKNYKHWRDSWKLSHVEEWPDNVDF 171 (336)
T ss_dssp HHHHHHHHHHTCCTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEEESSHHHHHHHHHHHHHHHHHHTTTCSSCCCCCEEE
T ss_pred HHHHHHHHhcCCCCCCEEEEeCCCcCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHHhhcccccccccccCCceEE
Confidence 33455666667778899999999999999999987 666799999999999999999887530 00 1268999
Q ss_pred EEecCCCC--CCCCCceeeEEeccccccCCChHHHHHHHHhcccCCcEEEEEeecc
Q 018740 235 VRADISRL--PFASSSIDAVHAGAAIHCWSSPSTGVAEISRVLRPGGVFVGTTYIV 288 (351)
Q Consensus 235 ~~~d~~~l--p~~~~~fD~V~~~~vl~h~~d~~~~l~~i~~~LkpgG~li~~~~~~ 288 (351)
+.+|+.+. ++++++||+|++. .+++..+++++.++|+|||.+++..+..
T Consensus 172 ~~~d~~~~~~~~~~~~fD~V~~~-----~~~~~~~l~~~~~~LkpgG~lv~~~~~~ 222 (336)
T 2b25_A 172 IHKDISGATEDIKSLTFDAVALD-----MLNPHVTLPVFYPHLKHGGVCAVYVVNI 222 (336)
T ss_dssp EESCTTCCC-------EEEEEEC-----SSSTTTTHHHHGGGEEEEEEEEEEESSH
T ss_pred EECChHHcccccCCCCeeEEEEC-----CCCHHHHHHHHHHhcCCCcEEEEEeCCH
Confidence 99999886 4567789999974 4566668999999999999999877653
No 140
>3uwp_A Histone-lysine N-methyltransferase, H3 lysine-79; epigenetics, tubercidin, structu genomics, structural genomics consortium, SGC; HET: 5ID; 2.05A {Homo sapiens} PDB: 4eqz_A* 3sx0_A* 4er0_A* 4er7_A* 1nw3_A* 4er6_A* 4er5_A* 3qow_A* 3qox_A* 4ek9_A* 4ekg_A* 4eki_A* 4er3_A* 3sr4_A*
Probab=99.61 E-value=1.5e-15 Score=142.19 Aligned_cols=122 Identities=11% Similarity=0.054 Sum_probs=99.0
Q ss_pred HHHHHHhccCCCCCCeEEEEcCccCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHh-------hhCCCCCCCeEEEEe
Q 018740 165 EFELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQ-------QESNFPKENFLLVRA 237 (351)
Q Consensus 165 ~~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~-------~~~g~~~~~i~~~~~ 237 (351)
.+..+...+...++.+|||||||+|.++..++...+..+++|+|+|+.+++.|++++. .. |....+++++++
T Consensus 161 ~i~~il~~l~l~~gd~VLDLGCGtG~l~l~lA~~~g~~kVvGIDiS~~~lelAr~n~e~frkr~~~~-Gl~~~rVefi~G 239 (438)
T 3uwp_A 161 LVAQMIDEIKMTDDDLFVDLGSGVGQVVLQVAAATNCKHHYGVEKADIPAKYAETMDREFRKWMKWY-GKKHAEYTLERG 239 (438)
T ss_dssp HHHHHHHHHCCCTTCEEEEESCTTSHHHHHHHHHCCCSEEEEEECCHHHHHHHHHHHHHHHHHHHHH-TBCCCEEEEEEC
T ss_pred HHHHHHHhcCCCCCCEEEEeCCCCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHHHHHHHHh-CCCCCCeEEEEC
Confidence 3556677777888999999999999999999877544469999999999999987542 22 222368999999
Q ss_pred cCCCCCCCC--CceeeEEeccccccCCChHHHHHHHHhcccCCcEEEEEeecc
Q 018740 238 DISRLPFAS--SSIDAVHAGAAIHCWSSPSTGVAEISRVLRPGGVFVGTTYIV 288 (351)
Q Consensus 238 d~~~lp~~~--~~fD~V~~~~vl~h~~d~~~~l~~i~~~LkpgG~li~~~~~~ 288 (351)
|+.++|+.+ ..||+|+++..+ +.++....|.++.++|||||+|++.....
T Consensus 240 D~~~lp~~d~~~~aDVVf~Nn~~-F~pdl~~aL~Ei~RvLKPGGrIVssE~f~ 291 (438)
T 3uwp_A 240 DFLSEEWRERIANTSVIFVNNFA-FGPEVDHQLKERFANMKEGGRIVSSKPFA 291 (438)
T ss_dssp CTTSHHHHHHHHTCSEEEECCTT-CCHHHHHHHHHHHTTSCTTCEEEESSCSS
T ss_pred cccCCccccccCCccEEEEcccc-cCchHHHHHHHHHHcCCCCcEEEEeeccc
Confidence 999988754 479999998775 45788899999999999999999976544
No 141
>1g8a_A Fibrillarin-like PRE-rRNA processing protein; rRNA binding, RNA binding, structural genomics, BSGC structure funded by NIH; 1.40A {Pyrococcus horikoshii} SCOP: c.66.1.3 PDB: 2nnw_B 3nmu_F* 3nvk_I* 3nvm_B 1pry_A
Probab=99.61 E-value=2.8e-14 Score=125.10 Aligned_cols=149 Identities=11% Similarity=0.114 Sum_probs=107.0
Q ss_pred cCCCCCCeEEEEcCccCHHHHHHHHh-CCCCeEEEEeCCHHHHHHHHHHHhhhCCCCCCCeEEEEecCCCCC---CCCCc
Q 018740 173 LKPVLGGNIIDASCGSGLFSRIFAKS-GLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLP---FASSS 248 (351)
Q Consensus 173 l~~~~~~~vLDiGcG~G~~~~~l~~~-~~~~~v~gvD~s~~~~~~a~~~~~~~~g~~~~~i~~~~~d~~~lp---~~~~~ 248 (351)
+...++.+|||+|||+|.++..+++. ++..+|+|+|+|+.+++.+++++... .++.++.+|+.+.. ...++
T Consensus 69 ~~~~~~~~vLDlG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~~~~~~~~~-----~~v~~~~~d~~~~~~~~~~~~~ 143 (227)
T 1g8a_A 69 FPIKPGKSVLYLGIASGTTASHVSDIVGWEGKIFGIEFSPRVLRELVPIVEER-----RNIVPILGDATKPEEYRALVPK 143 (227)
T ss_dssp CCCCTTCEEEEETTTSTTHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHSSC-----TTEEEEECCTTCGGGGTTTCCC
T ss_pred cCCCCCCEEEEEeccCCHHHHHHHHHhCCCeEEEEEECCHHHHHHHHHHHhcc-----CCCEEEEccCCCcchhhcccCC
Confidence 33567889999999999999999987 45569999999999999998876543 68999999998732 12458
Q ss_pred eeeEEeccccccCCChH-HHHHHHHhcccCCcEEEEEeeccCCCCCcchHHHHHHHHHhhccCCccCCCHHHHHHHHHHC
Q 018740 249 IDAVHAGAAIHCWSSPS-TGVAEISRVLRPGGVFVGTTYIVDGPFNLIPFSRLLRQNMMQISGSYTFLSEREIEDLCRAC 327 (351)
Q Consensus 249 fD~V~~~~vl~h~~d~~-~~l~~i~~~LkpgG~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~~ll~~a 327 (351)
||+|++... .++.. .+++++.++|+|||.+++........ ...+. ..+..+++.++ +++
T Consensus 144 ~D~v~~~~~---~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~-~~~~~---------------~~~~~~~l~~l-~~~ 203 (227)
T 1g8a_A 144 VDVIFEDVA---QPTQAKILIDNAEVYLKRGGYGMIAVKSRSID-VTKEP---------------EQVFREVEREL-SEY 203 (227)
T ss_dssp EEEEEECCC---STTHHHHHHHHHHHHEEEEEEEEEEEEGGGTC-TTSCH---------------HHHHHHHHHHH-HTT
T ss_pred ceEEEECCC---CHhHHHHHHHHHHHhcCCCCEEEEEEecCCCC-CCCCh---------------hhhhHHHHHHH-Hhh
Confidence 999997654 23443 44999999999999999984322111 00110 11235677777 777
Q ss_pred CCeEEEEEecC----eEEEEEEec
Q 018740 328 GLVDFKCTRNR----GFVMFTATK 347 (351)
Q Consensus 328 Gf~~v~~~~~g----~~~~~~a~k 347 (351)
|++++..... .+.+++++|
T Consensus 204 -f~~~~~~~~~~~~~~~~~~~~~~ 226 (227)
T 1g8a_A 204 -FEVIERLNLEPYEKDHALFVVRK 226 (227)
T ss_dssp -SEEEEEEECTTTSSSEEEEEEEC
T ss_pred -ceeeeEeccCcccCCCEEEEEEe
Confidence 9998865533 256667765
No 142
>3lec_A NADB-rossmann superfamily protein; PSI, MCSG, structural genomics, midwest CENT structural genomics, protein structure initiative; 1.80A {Streptococcus agalactiae}
Probab=99.61 E-value=2.2e-14 Score=125.28 Aligned_cols=148 Identities=9% Similarity=0.084 Sum_probs=114.9
Q ss_pred HHHHHhccCCCCCCeEEEEcCccCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHhhhCCCCCCCeEEEEecCCCCCCC
Q 018740 166 FELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLPFA 245 (351)
Q Consensus 166 ~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~g~~~~~i~~~~~d~~~lp~~ 245 (351)
++.+..++.+ +.+|||||||+|.++..+++.++..+|+++|+++.+++.|++++... |. ..++++..+|..+...+
T Consensus 12 L~~i~~~v~~--g~~VlDIGtGsG~l~i~la~~~~~~~V~AvDi~~~al~~A~~N~~~~-gl-~~~I~~~~gD~l~~~~~ 87 (230)
T 3lec_A 12 LQKVANYVPK--GARLLDVGSDHAYLPIFLLQMGYCDFAIAGEVVNGPYQSALKNVSEH-GL-TSKIDVRLANGLSAFEE 87 (230)
T ss_dssp HHHHHTTSCT--TEEEEEETCSTTHHHHHHHHTTCEEEEEEEESSHHHHHHHHHHHHHT-TC-TTTEEEEECSGGGGCCG
T ss_pred HHHHHHhCCC--CCEEEEECCchHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHc-CC-CCcEEEEECchhhcccc
Confidence 3556666654 67999999999999999999987678999999999999999999887 32 45799999999876654
Q ss_pred CCceeeEEeccccccCCChHHHHHHHHhcccCCcEEEEEeeccCCCCCcchHHHHHHHHHhhccCCccCCCHHHHHHHHH
Q 018740 246 SSSIDAVHAGAAIHCWSSPSTGVAEISRVLRPGGVFVGTTYIVDGPFNLIPFSRLLRQNMMQISGSYTFLSEREIEDLCR 325 (351)
Q Consensus 246 ~~~fD~V~~~~vl~h~~d~~~~l~~i~~~LkpgG~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~~ll~ 325 (351)
++.||+|+..++.-. -...+|.+..+.|+++|.|++.... ..+.++++|.
T Consensus 88 ~~~~D~IviaGmGg~--lI~~IL~~~~~~l~~~~~lIlqp~~----------------------------~~~~lr~~L~ 137 (230)
T 3lec_A 88 ADNIDTITICGMGGR--LIADILNNDIDKLQHVKTLVLQPNN----------------------------REDDLRKWLA 137 (230)
T ss_dssp GGCCCEEEEEEECHH--HHHHHHHHTGGGGTTCCEEEEEESS----------------------------CHHHHHHHHH
T ss_pred ccccCEEEEeCCchH--HHHHHHHHHHHHhCcCCEEEEECCC----------------------------ChHHHHHHHH
Confidence 457999987665331 1346788889999999999885421 3678999999
Q ss_pred HCCCeEEEEE---ec-CeEEEEEEec
Q 018740 326 ACGLVDFKCT---RN-RGFVMFTATK 347 (351)
Q Consensus 326 ~aGf~~v~~~---~~-g~~~~~~a~k 347 (351)
+.||.+++.. .. ..|.++.+.+
T Consensus 138 ~~Gf~i~~E~lv~e~~~~Yeii~~~~ 163 (230)
T 3lec_A 138 ANDFEIVAEDILTENDKRYEILVVKH 163 (230)
T ss_dssp HTTEEEEEEEEEEC--CEEEEEEEEE
T ss_pred HCCCEEEEEEEEEECCEEEEEEEEEe
Confidence 9999988843 23 3555555544
No 143
>3ckk_A TRNA (guanine-N(7)-)-methyltransferase; mettl1, S-adenosyl-L-methionine, tRNA Pro structural genomics, structural genomics consortium, SGC; HET: SAM; 1.55A {Homo sapiens}
Probab=99.61 E-value=2.6e-15 Score=132.64 Aligned_cols=112 Identities=18% Similarity=0.173 Sum_probs=87.4
Q ss_pred CCCCeEEEEcCccCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHhhhC---CCCCCCeEEEEecCCC-CC--CCCCce
Q 018740 176 VLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQES---NFPKENFLLVRADISR-LP--FASSSI 249 (351)
Q Consensus 176 ~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~---g~~~~~i~~~~~d~~~-lp--~~~~~f 249 (351)
.++.+|||||||+|.++..+++..+...|+|+|+|+.|++.|++++...+ .....++.++++|+.. ++ +++++|
T Consensus 45 ~~~~~vLDiGcG~G~~~~~la~~~p~~~v~GiDis~~~l~~A~~~~~~l~~~~~~~~~nv~~~~~d~~~~l~~~~~~~~~ 124 (235)
T 3ckk_A 45 QAQVEFADIGCGYGGLLVELSPLFPDTLILGLEIRVKVSDYVQDRIRALRAAPAGGFQNIACLRSNAMKHLPNFFYKGQL 124 (235)
T ss_dssp -CCEEEEEETCTTCHHHHHHGGGSTTSEEEEEESCHHHHHHHHHHHHHHHHSTTCCCTTEEEEECCTTTCHHHHCCTTCE
T ss_pred CCCCeEEEEccCCcHHHHHHHHHCCCCeEEEEECCHHHHHHHHHHHHHHHHHHhcCCCeEEEEECcHHHhhhhhCCCcCe
Confidence 34568999999999999999999887899999999999999998765310 0124789999999987 66 778999
Q ss_pred eeEEeccccccCCC--------hHHHHHHHHhcccCCcEEEEEeec
Q 018740 250 DAVHAGAAIHCWSS--------PSTGVAEISRVLRPGGVFVGTTYI 287 (351)
Q Consensus 250 D~V~~~~vl~h~~d--------~~~~l~~i~~~LkpgG~li~~~~~ 287 (351)
|.|++...-.|... ...+++++.++|+|||.+++.+..
T Consensus 125 D~v~~~~~dp~~k~~h~krr~~~~~~l~~~~~~LkpGG~l~~~td~ 170 (235)
T 3ckk_A 125 TKMFFLFPDPHFKRTKHKWRIISPTLLAEYAYVLRVGGLVYTITDV 170 (235)
T ss_dssp EEEEEESCC-----------CCCHHHHHHHHHHEEEEEEEEEEESC
T ss_pred eEEEEeCCCchhhhhhhhhhhhhHHHHHHHHHHCCCCCEEEEEeCC
Confidence 99987543222110 137899999999999999998754
No 144
>1vbf_A 231AA long hypothetical protein-L-isoaspartate O- methyltransferase; trimeric coiled coil assembly; 2.80A {Sulfolobus tokodaii} SCOP: c.66.1.7
Probab=99.60 E-value=8.1e-15 Score=128.74 Aligned_cols=112 Identities=17% Similarity=0.145 Sum_probs=94.9
Q ss_pred HHHHHHHhccCCCCCCeEEEEcCccCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHhhhCCCCCCCeEEEEecCCCCC
Q 018740 164 KEFELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLP 243 (351)
Q Consensus 164 ~~~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~g~~~~~i~~~~~d~~~lp 243 (351)
...+.+...+...++.+|||+|||+|.++..+++.+. +|+|+|+|+.+++.+++++... . ++.++.+|+....
T Consensus 57 ~~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~--~v~~vD~~~~~~~~a~~~~~~~----~-~v~~~~~d~~~~~ 129 (231)
T 1vbf_A 57 NLGIFMLDELDLHKGQKVLEIGTGIGYYTALIAEIVD--KVVSVEINEKMYNYASKLLSYY----N-NIKLILGDGTLGY 129 (231)
T ss_dssp HHHHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHHSS--EEEEEESCHHHHHHHHHHHTTC----S-SEEEEESCGGGCC
T ss_pred HHHHHHHHhcCCCCCCEEEEEcCCCCHHHHHHHHHcC--EEEEEeCCHHHHHHHHHHHhhc----C-CeEEEECCccccc
Confidence 3345666677777788999999999999999999874 9999999999999999987665 2 8999999998733
Q ss_pred CCCCceeeEEeccccccCCChHHHHHHHHhcccCCcEEEEEeecc
Q 018740 244 FASSSIDAVHAGAAIHCWSSPSTGVAEISRVLRPGGVFVGTTYIV 288 (351)
Q Consensus 244 ~~~~~fD~V~~~~vl~h~~d~~~~l~~i~~~LkpgG~li~~~~~~ 288 (351)
..+++||+|++..+++|+. .++.++|+|||++++..+..
T Consensus 130 ~~~~~fD~v~~~~~~~~~~------~~~~~~L~pgG~l~~~~~~~ 168 (231)
T 1vbf_A 130 EEEKPYDRVVVWATAPTLL------CKPYEQLKEGGIMILPIGVG 168 (231)
T ss_dssp GGGCCEEEEEESSBBSSCC------HHHHHTEEEEEEEEEEECSS
T ss_pred ccCCCccEEEECCcHHHHH------HHHHHHcCCCcEEEEEEcCC
Confidence 3467899999999999986 36889999999999987654
No 145
>3bwc_A Spermidine synthase; SAM, SGPP, structura genomics, PSI, protein structure initiative, structural GEN pathogenic protozoa consortium; HET: MSE SAM; 2.30A {Trypanosoma cruzi} PDB: 3bwb_A*
Probab=99.60 E-value=4.7e-15 Score=136.05 Aligned_cols=150 Identities=11% Similarity=0.126 Sum_probs=108.8
Q ss_pred CCCCeEEEEcCccCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHhhh-CCCCCCCeEEEEecCCCCCC--CCCceeeE
Q 018740 176 VLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQE-SNFPKENFLLVRADISRLPF--ASSSIDAV 252 (351)
Q Consensus 176 ~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~-~g~~~~~i~~~~~d~~~lp~--~~~~fD~V 252 (351)
.++.+|||||||+|.++..+++..+..+|+++|+|+.+++.|++++... .+...++++++.+|+.+.+. .+++||+|
T Consensus 94 ~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~a~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~fDvI 173 (304)
T 3bwc_A 94 PKPERVLIIGGGDGGVLREVLRHGTVEHCDLVDIDGEVMEQSKQHFPQISRSLADPRATVRVGDGLAFVRQTPDNTYDVV 173 (304)
T ss_dssp SSCCEEEEEECTTSHHHHHHHTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHHHSSCTTCEEEE
T ss_pred CCCCeEEEEcCCCCHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHhHHhhcccCCCcEEEEECcHHHHHHhccCCceeEE
Confidence 3467999999999999999998765679999999999999999987421 01125789999999977643 36889999
Q ss_pred EeccccccCCCh----HHHHHHHHhcccCCcEEEEEeeccCCCCCcchHHHHHHHHHhhccCCccCCCHHHHHHHHHHCC
Q 018740 253 HAGAAIHCWSSP----STGVAEISRVLRPGGVFVGTTYIVDGPFNLIPFSRLLRQNMMQISGSYTFLSEREIEDLCRACG 328 (351)
Q Consensus 253 ~~~~vl~h~~d~----~~~l~~i~~~LkpgG~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~~ll~~aG 328 (351)
++....++.+.. ..++++++++|+|||++++..... +. .....+++.+.++++|
T Consensus 174 i~d~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~~~--------~~--------------~~~~~~~~~~~l~~~G 231 (304)
T 3bwc_A 174 IIDTTDPAGPASKLFGEAFYKDVLRILKPDGICCNQGESI--------WL--------------DLELIEKMSRFIRETG 231 (304)
T ss_dssp EEECC---------CCHHHHHHHHHHEEEEEEEEEEECCT--------TT--------------CHHHHHHHHHHHHHHT
T ss_pred EECCCCccccchhhhHHHHHHHHHHhcCCCcEEEEecCCc--------cc--------------chHHHHHHHHHHHhCC
Confidence 997665554433 588999999999999999875431 00 0013467888999999
Q ss_pred CeEEEEEe-------cCeEEEEEEec
Q 018740 329 LVDFKCTR-------NRGFVMFTATK 347 (351)
Q Consensus 329 f~~v~~~~-------~g~~~~~~a~k 347 (351)
|..++... .|.+.++.+.|
T Consensus 232 F~~v~~~~~~vP~yp~g~w~f~~as~ 257 (304)
T 3bwc_A 232 FASVQYALMHVPTYPCGSIGTLVCSK 257 (304)
T ss_dssp CSEEEEEECCCTTSTTSCCEEEEEES
T ss_pred CCcEEEEEeecccccCcceEEEEEeC
Confidence 98877543 35555555655
No 146
>2fyt_A Protein arginine N-methyltransferase 3; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.6 PDB: 3smq_A* 1f3l_A*
Probab=99.60 E-value=8.5e-15 Score=136.48 Aligned_cols=112 Identities=19% Similarity=0.328 Sum_probs=94.8
Q ss_pred HHHHhccCCCCCCeEEEEcCccCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHhhhCCCCCCCeEEEEecCCCCCCCC
Q 018740 167 ELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLPFAS 246 (351)
Q Consensus 167 ~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~g~~~~~i~~~~~d~~~lp~~~ 246 (351)
+.+...+...++.+|||||||+|.++..+++.+ ..+|+|+|+|+ |++.|++++... +. ..++.++.+|+.++++++
T Consensus 54 ~~i~~~~~~~~~~~VLDiGcGtG~ls~~la~~g-~~~v~gvD~s~-~~~~a~~~~~~~-~~-~~~i~~~~~d~~~~~~~~ 129 (340)
T 2fyt_A 54 DFIYQNPHIFKDKVVLDVGCGTGILSMFAAKAG-AKKVLGVDQSE-ILYQAMDIIRLN-KL-EDTITLIKGKIEEVHLPV 129 (340)
T ss_dssp HHHHHCGGGTTTCEEEEETCTTSHHHHHHHHTT-CSEEEEEESST-HHHHHHHHHHHT-TC-TTTEEEEESCTTTSCCSC
T ss_pred HHHHhhhhhcCCCEEEEeeccCcHHHHHHHHcC-CCEEEEEChHH-HHHHHHHHHHHc-CC-CCcEEEEEeeHHHhcCCC
Confidence 455555555668899999999999999999985 35899999997 999999988775 22 368999999999998888
Q ss_pred CceeeEEecc---ccccCCChHHHHHHHHhcccCCcEEE
Q 018740 247 SSIDAVHAGA---AIHCWSSPSTGVAEISRVLRPGGVFV 282 (351)
Q Consensus 247 ~~fD~V~~~~---vl~h~~d~~~~l~~i~~~LkpgG~li 282 (351)
++||+|++.. .+.|..++..+++++.++|||||.++
T Consensus 130 ~~~D~Ivs~~~~~~l~~~~~~~~~l~~~~~~LkpgG~li 168 (340)
T 2fyt_A 130 EKVDVIISEWMGYFLLFESMLDSVLYAKNKYLAKGGSVY 168 (340)
T ss_dssp SCEEEEEECCCBTTBTTTCHHHHHHHHHHHHEEEEEEEE
T ss_pred CcEEEEEEcCchhhccCHHHHHHHHHHHHhhcCCCcEEE
Confidence 8999999876 46666777889999999999999988
No 147
>2frn_A Hypothetical protein PH0793; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Pyrococcus horikoshii OT3} PDB: 3k6r_A 3a25_A* 3a26_A*
Probab=99.59 E-value=3.2e-14 Score=128.91 Aligned_cols=137 Identities=14% Similarity=0.100 Sum_probs=108.0
Q ss_pred HHHHhccCCCCCCeEEEEcCccCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHhhhCCCCCCCeEEEEecCCCCCCCC
Q 018740 167 ELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLPFAS 246 (351)
Q Consensus 167 ~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~g~~~~~i~~~~~d~~~lp~~~ 246 (351)
..+...+. ++.+|||+|||+|.++..+++.+.. +|+|+|+|+.+++.|++++..+ +. ..+++++++|+.+++. +
T Consensus 117 ~~l~~~~~--~~~~VLDlgcG~G~~~~~la~~~~~-~V~~vD~s~~~~~~a~~n~~~n-~~-~~~v~~~~~D~~~~~~-~ 190 (278)
T 2frn_A 117 VRMAKVAK--PDELVVDMFAGIGHLSLPIAVYGKA-KVIAIEKDPYTFKFLVENIHLN-KV-EDRMSAYNMDNRDFPG-E 190 (278)
T ss_dssp HHHHHHCC--TTCEEEETTCTTTTTHHHHHHHTCC-EEEEECCCHHHHHHHHHHHHHT-TC-TTTEEEECSCTTTCCC-C
T ss_pred HHHHHhCC--CCCEEEEecccCCHHHHHHHHhCCC-EEEEEECCHHHHHHHHHHHHHc-CC-CceEEEEECCHHHhcc-c
Confidence 44455543 4789999999999999999999863 6999999999999999998876 22 3459999999999875 7
Q ss_pred CceeeEEeccccccCCChHHHHHHHHhcccCCcEEEEEeeccCCCCCcchHHHHHHHHHhhccCCccCCCHHHHHHHHHH
Q 018740 247 SSIDAVHAGAAIHCWSSPSTGVAEISRVLRPGGVFVGTTYIVDGPFNLIPFSRLLRQNMMQISGSYTFLSEREIEDLCRA 326 (351)
Q Consensus 247 ~~fD~V~~~~vl~h~~d~~~~l~~i~~~LkpgG~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~~ll~~ 326 (351)
++||+|++... .+...++.++.++|+|||++++.+...... ...-..+.+.+.+++
T Consensus 191 ~~fD~Vi~~~p----~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~--------------------~~~~~~~~i~~~~~~ 246 (278)
T 2frn_A 191 NIADRILMGYV----VRTHEFIPKALSIAKDGAIIHYHNTVPEKL--------------------MPREPFETFKRITKE 246 (278)
T ss_dssp SCEEEEEECCC----SSGGGGHHHHHHHEEEEEEEEEEEEEEGGG--------------------TTTTTHHHHHHHHHH
T ss_pred CCccEEEECCc----hhHHHHHHHHHHHCCCCeEEEEEEeecccc--------------------ccccHHHHHHHHHHH
Confidence 88999998533 455688999999999999999988764211 111245678899999
Q ss_pred CCCeEEE
Q 018740 327 CGLVDFK 333 (351)
Q Consensus 327 aGf~~v~ 333 (351)
+||....
T Consensus 247 ~G~~~~~ 253 (278)
T 2frn_A 247 YGYDVEK 253 (278)
T ss_dssp TTCEEEE
T ss_pred cCCeeEE
Confidence 9997654
No 148
>3dmg_A Probable ribosomal RNA small subunit methyltransf; monomethyltranserase, 16S rRNA methyltransferase, N2 G1207 methyltransferase; HET: SAH; 1.55A {Thermus thermophilus} PDB: 3dmf_A* 3dmh_A* 2zul_A* 2zwv_A*
Probab=99.59 E-value=7.6e-15 Score=138.57 Aligned_cols=116 Identities=19% Similarity=0.248 Sum_probs=97.8
Q ss_pred HHHHHhccC--CCCCCeEEEEcCccCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHhhhCCCCCCCeEEEEecCCCCC
Q 018740 166 FELMKGYLK--PVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLP 243 (351)
Q Consensus 166 ~~~l~~~l~--~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~g~~~~~i~~~~~d~~~lp 243 (351)
.+.+...+. ..++.+|||+|||+|.++..+++.+. +|+|+|+|+.+++.+++++... ..+++++.+|+.+.+
T Consensus 220 l~~l~~~l~~~~~~~~~VLDlGcG~G~~~~~la~~g~--~V~gvDis~~al~~A~~n~~~~----~~~v~~~~~D~~~~~ 293 (381)
T 3dmg_A 220 LEALQERLGPEGVRGRQVLDLGAGYGALTLPLARMGA--EVVGVEDDLASVLSLQKGLEAN----ALKAQALHSDVDEAL 293 (381)
T ss_dssp HHHHHHHHCTTTTTTCEEEEETCTTSTTHHHHHHTTC--EEEEEESBHHHHHHHHHHHHHT----TCCCEEEECSTTTTS
T ss_pred HHHHHHhhcccCCCCCEEEEEeeeCCHHHHHHHHcCC--EEEEEECCHHHHHHHHHHHHHc----CCCeEEEEcchhhcc
Confidence 344444432 33577999999999999999999865 9999999999999999998877 446899999999987
Q ss_pred CCCCceeeEEecccccc-----CCChHHHHHHHHhcccCCcEEEEEeec
Q 018740 244 FASSSIDAVHAGAAIHC-----WSSPSTGVAEISRVLRPGGVFVGTTYI 287 (351)
Q Consensus 244 ~~~~~fD~V~~~~vl~h-----~~d~~~~l~~i~~~LkpgG~li~~~~~ 287 (351)
.++++||+|+++..+|+ ..+...+++++.++|+|||.++++...
T Consensus 294 ~~~~~fD~Ii~npp~~~~~~~~~~~~~~~l~~~~~~LkpGG~l~iv~n~ 342 (381)
T 3dmg_A 294 TEEARFDIIVTNPPFHVGGAVILDVAQAFVNVAAARLRPGGVFFLVSNP 342 (381)
T ss_dssp CTTCCEEEEEECCCCCTTCSSCCHHHHHHHHHHHHHEEEEEEEEEEECT
T ss_pred ccCCCeEEEEECCchhhcccccHHHHHHHHHHHHHhcCcCcEEEEEEcC
Confidence 76789999999999988 345678999999999999999997654
No 149
>1dl5_A Protein-L-isoaspartate O-methyltransferase; isoaspartyl residues, protein repair, deamidation, post-translational modification; HET: SAH; 1.80A {Thermotoga maritima} SCOP: c.66.1.7 d.197.1.1
Probab=99.59 E-value=1.1e-14 Score=134.42 Aligned_cols=114 Identities=17% Similarity=0.181 Sum_probs=96.7
Q ss_pred HHHHHHhccCCCCCCeEEEEcCccCHHHHHHHHhCC-CCeEEEEeCCHHHHHHHHHHHhhhCCCCCCCeEEEEecCCCCC
Q 018740 165 EFELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGL-FSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLP 243 (351)
Q Consensus 165 ~~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~-~~~v~gvD~s~~~~~~a~~~~~~~~g~~~~~i~~~~~d~~~lp 243 (351)
..+.+...+...++.+|||||||+|.++..+++.++ ..+|+|+|+|+.+++.|++++... | ..++.+..+|+.+.+
T Consensus 63 ~~~~l~~~l~~~~~~~VLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~-g--~~~v~~~~~d~~~~~ 139 (317)
T 1dl5_A 63 LMALFMEWVGLDKGMRVLEIGGGTGYNAAVMSRVVGEKGLVVSVEYSRKICEIAKRNVERL-G--IENVIFVCGDGYYGV 139 (317)
T ss_dssp HHHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHT-T--CCSEEEEESCGGGCC
T ss_pred HHHHHHHhcCCCCcCEEEEecCCchHHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHHHc-C--CCCeEEEECChhhcc
Confidence 345666777777889999999999999999998876 356999999999999999998776 2 356999999998865
Q ss_pred CCCCceeeEEeccccccCCChHHHHHHHHhcccCCcEEEEEeec
Q 018740 244 FASSSIDAVHAGAAIHCWSSPSTGVAEISRVLRPGGVFVGTTYI 287 (351)
Q Consensus 244 ~~~~~fD~V~~~~vl~h~~d~~~~l~~i~~~LkpgG~li~~~~~ 287 (351)
..+++||+|++..+++|+. +++.++|||||++++....
T Consensus 140 ~~~~~fD~Iv~~~~~~~~~------~~~~~~LkpgG~lvi~~~~ 177 (317)
T 1dl5_A 140 PEFSPYDVIFVTVGVDEVP------ETWFTQLKEGGRVIVPINL 177 (317)
T ss_dssp GGGCCEEEEEECSBBSCCC------HHHHHHEEEEEEEEEEBCB
T ss_pred ccCCCeEEEEEcCCHHHHH------HHHHHhcCCCcEEEEEECC
Confidence 5567899999999999986 5788999999999997654
No 150
>2yxe_A Protein-L-isoaspartate O-methyltransferase; rossman-type fold, alpha/beta/alpha sandwich structure, STRU genomics, NPPSFA; 2.00A {Methanocaldococcus jannaschii}
Probab=99.59 E-value=1.5e-14 Score=125.63 Aligned_cols=113 Identities=16% Similarity=0.144 Sum_probs=93.9
Q ss_pred HHHHHhccCCCCCCeEEEEcCccCHHHHHHHHhC-CCCeEEEEeCCHHHHHHHHHHHhhhCCCCCCCeEEEEecCCCCCC
Q 018740 166 FELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSG-LFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLPF 244 (351)
Q Consensus 166 ~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~-~~~~v~gvD~s~~~~~~a~~~~~~~~g~~~~~i~~~~~d~~~lp~ 244 (351)
...+...+...++.+|||+|||+|.++..+++.+ +..+|+++|+|+.+++.+++++... + ..++.+..+|+.....
T Consensus 66 ~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~-~--~~~v~~~~~d~~~~~~ 142 (215)
T 2yxe_A 66 VGMMCELLDLKPGMKVLEIGTGCGYHAAVTAEIVGEDGLVVSIERIPELAEKAERTLRKL-G--YDNVIVIVGDGTLGYE 142 (215)
T ss_dssp HHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHH-T--CTTEEEEESCGGGCCG
T ss_pred HHHHHHhhCCCCCCEEEEECCCccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHc-C--CCCeEEEECCcccCCC
Confidence 4456666677778899999999999999999886 4469999999999999999988765 2 3579999999854322
Q ss_pred CCCceeeEEeccccccCCChHHHHHHHHhcccCCcEEEEEeec
Q 018740 245 ASSSIDAVHAGAAIHCWSSPSTGVAEISRVLRPGGVFVGTTYI 287 (351)
Q Consensus 245 ~~~~fD~V~~~~vl~h~~d~~~~l~~i~~~LkpgG~li~~~~~ 287 (351)
.+++||+|++..+++|++ +++.++|+|||.+++..+.
T Consensus 143 ~~~~fD~v~~~~~~~~~~------~~~~~~L~pgG~lv~~~~~ 179 (215)
T 2yxe_A 143 PLAPYDRIYTTAAGPKIP------EPLIRQLKDGGKLLMPVGR 179 (215)
T ss_dssp GGCCEEEEEESSBBSSCC------HHHHHTEEEEEEEEEEESS
T ss_pred CCCCeeEEEECCchHHHH------HHHHHHcCCCcEEEEEECC
Confidence 367899999999999986 4889999999999998764
No 151
>2ift_A Putative methylase HI0767; NESG, Y767_haein, structural genomics, PSI-2, protein structure initiative; 2.30A {Haemophilus influenzae} SCOP: c.66.1.46
Probab=99.58 E-value=2.4e-15 Score=129.66 Aligned_cols=109 Identities=14% Similarity=0.136 Sum_probs=88.8
Q ss_pred CCCeEEEEcCccCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHhhhCCCCCCCeEEEEecCCCCCC--CCCc-eeeEE
Q 018740 177 LGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLPF--ASSS-IDAVH 253 (351)
Q Consensus 177 ~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~g~~~~~i~~~~~d~~~lp~--~~~~-fD~V~ 253 (351)
++.+|||+|||+|.++..++..+. .+|+|+|+|+.|++.|++++... +....+++++++|+.++.. .+++ ||+|+
T Consensus 53 ~~~~vLDlGcGtG~~~~~~~~~~~-~~v~gvD~s~~~l~~a~~~~~~~-~~~~~~v~~~~~d~~~~~~~~~~~~~fD~I~ 130 (201)
T 2ift_A 53 HQSECLDGFAGSGSLGFEALSRQA-KKVTFLELDKTVANQLKKNLQTL-KCSSEQAEVINQSSLDFLKQPQNQPHFDVVF 130 (201)
T ss_dssp TTCEEEETTCTTCHHHHHHHHTTC-SEEEEECSCHHHHHHHHHHHHHT-TCCTTTEEEECSCHHHHTTSCCSSCCEEEEE
T ss_pred CCCeEEEcCCccCHHHHHHHHccC-CEEEEEECCHHHHHHHHHHHHHh-CCCccceEEEECCHHHHHHhhccCCCCCEEE
Confidence 467999999999999998777763 58999999999999999998876 2111589999999876532 3578 99999
Q ss_pred eccccccCCChHHHHHHH--HhcccCCcEEEEEeecc
Q 018740 254 AGAAIHCWSSPSTGVAEI--SRVLRPGGVFVGTTYIV 288 (351)
Q Consensus 254 ~~~vl~h~~d~~~~l~~i--~~~LkpgG~li~~~~~~ 288 (351)
+...++ ..+...+++++ .++|+|||.+++.....
T Consensus 131 ~~~~~~-~~~~~~~l~~~~~~~~LkpgG~l~i~~~~~ 166 (201)
T 2ift_A 131 LDPPFH-FNLAEQAISLLCENNWLKPNALIYVETEKD 166 (201)
T ss_dssp ECCCSS-SCHHHHHHHHHHHTTCEEEEEEEEEEEESS
T ss_pred ECCCCC-CccHHHHHHHHHhcCccCCCcEEEEEECCC
Confidence 988754 56777889999 67899999999977653
No 152
>1i9g_A Hypothetical protein RV2118C; mtase, adoMet, crystal, structural genomics, protein structure initiative; HET: SAM; 1.98A {Mycobacterium tuberculosis} SCOP: c.66.1.13
Probab=99.58 E-value=2.5e-14 Score=129.42 Aligned_cols=120 Identities=19% Similarity=0.252 Sum_probs=99.7
Q ss_pred HHHHHHHHhccCCCCCCeEEEEcCccCHHHHHHHHh-CCCCeEEEEeCCHHHHHHHHHHHhhhCCCCCCCeEEEEecCCC
Q 018740 163 EKEFELMKGYLKPVLGGNIIDASCGSGLFSRIFAKS-GLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISR 241 (351)
Q Consensus 163 ~~~~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~-~~~~~v~gvD~s~~~~~~a~~~~~~~~g~~~~~i~~~~~d~~~ 241 (351)
......+...+...++.+|||+|||+|.++..+++. ++..+|+++|+++.+++.|++++....|....++.++.+|+.+
T Consensus 85 ~~~~~~i~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~g~~~~~v~~~~~d~~~ 164 (280)
T 1i9g_A 85 PKDAAQIVHEGDIFPGARVLEAGAGSGALTLSLLRAVGPAGQVISYEQRADHAEHARRNVSGCYGQPPDNWRLVVSDLAD 164 (280)
T ss_dssp HHHHHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHHTSCCTTEEEECSCGGG
T ss_pred HHHHHHHHHHcCCCCCCEEEEEcccccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHhcCCCCCcEEEEECchHh
Confidence 334556677777778889999999999999999985 5566999999999999999998764300013689999999998
Q ss_pred CCCCCCceeeEEeccccccCCChHHHHHHHHhcccCCcEEEEEeec
Q 018740 242 LPFASSSIDAVHAGAAIHCWSSPSTGVAEISRVLRPGGVFVGTTYI 287 (351)
Q Consensus 242 lp~~~~~fD~V~~~~vl~h~~d~~~~l~~i~~~LkpgG~li~~~~~ 287 (351)
.++++++||+|++ +++++..+++++.++|+|||.+++.++.
T Consensus 165 ~~~~~~~~D~v~~-----~~~~~~~~l~~~~~~L~pgG~l~~~~~~ 205 (280)
T 1i9g_A 165 SELPDGSVDRAVL-----DMLAPWEVLDAVSRLLVAGGVLMVYVAT 205 (280)
T ss_dssp CCCCTTCEEEEEE-----ESSCGGGGHHHHHHHEEEEEEEEEEESS
T ss_pred cCCCCCceeEEEE-----CCcCHHHHHHHHHHhCCCCCEEEEEeCC
Confidence 8877889999997 5678889999999999999999998775
No 153
>4dcm_A Ribosomal RNA large subunit methyltransferase G; 23S rRNA (guanine1835-N2)-methyltransferase; HET: SAM; 2.30A {Escherichia coli}
Probab=99.58 E-value=5.4e-14 Score=132.55 Aligned_cols=122 Identities=16% Similarity=0.114 Sum_probs=98.5
Q ss_pred HHHHHHHhccCCCCCCeEEEEcCccCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHhhhCCCC-CCCeEEEEecCCCC
Q 018740 164 KEFELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFP-KENFLLVRADISRL 242 (351)
Q Consensus 164 ~~~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~g~~-~~~i~~~~~d~~~l 242 (351)
...+.+.+.+...++.+|||+|||+|.++..+++.++..+|+|+|+|+.+++.+++++... +.. ..+++++.+|+.+
T Consensus 209 ~~~~~ll~~l~~~~~~~VLDlGcG~G~~s~~la~~~p~~~V~gvD~s~~al~~Ar~n~~~n-gl~~~~~v~~~~~D~~~- 286 (375)
T 4dcm_A 209 IGARFFMQHLPENLEGEIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETN-MPEALDRCEFMINNALS- 286 (375)
T ss_dssp HHHHHHHHTCCCSCCSEEEEETCTTCHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHH-CGGGGGGEEEEECSTTT-
T ss_pred HHHHHHHHhCcccCCCeEEEEeCcchHHHHHHHHHCCCCEEEEEECcHHHHHHHHHHHHHc-CCCcCceEEEEechhhc-
Confidence 3345677778777778999999999999999999987789999999999999999998876 211 1368999999987
Q ss_pred CCCCCceeeEEeccccccCC---Ch--HHHHHHHHhcccCCcEEEEEeec
Q 018740 243 PFASSSIDAVHAGAAIHCWS---SP--STGVAEISRVLRPGGVFVGTTYI 287 (351)
Q Consensus 243 p~~~~~fD~V~~~~vl~h~~---d~--~~~l~~i~~~LkpgG~li~~~~~ 287 (351)
++++++||+|+++..+|+.. +. ..+++++.++|+|||.++++...
T Consensus 287 ~~~~~~fD~Ii~nppfh~~~~~~~~~~~~~l~~~~~~LkpgG~l~iv~n~ 336 (375)
T 4dcm_A 287 GVEPFRFNAVLCNPPFHQQHALTDNVAWEMFHHARRCLKINGELYIVANR 336 (375)
T ss_dssp TCCTTCEEEEEECCCC-------CCHHHHHHHHHHHHEEEEEEEEEEEET
T ss_pred cCCCCCeeEEEECCCcccCcccCHHHHHHHHHHHHHhCCCCcEEEEEEEC
Confidence 45678999999998887642 22 36899999999999999997654
No 154
>1ws6_A Methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.50A {Thermus thermophilus} SCOP: c.66.1.46
Probab=99.58 E-value=2.3e-15 Score=125.63 Aligned_cols=106 Identities=15% Similarity=0.137 Sum_probs=88.1
Q ss_pred CCCeEEEEcCccCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHhhhCCCCCCCeEEEEecCCCC-C-C--CCCceeeE
Q 018740 177 LGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRL-P-F--ASSSIDAV 252 (351)
Q Consensus 177 ~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~g~~~~~i~~~~~d~~~l-p-~--~~~~fD~V 252 (351)
++.+|||+|||+|.++..+++.++ .|+|+|+|+.+++.+++++... ..+++++++|+.+. + . ..++||+|
T Consensus 41 ~~~~vLD~GcG~G~~~~~l~~~~~--~v~~vD~~~~~~~~a~~~~~~~----~~~~~~~~~d~~~~~~~~~~~~~~~D~i 114 (171)
T 1ws6_A 41 RRGRFLDPFAGSGAVGLEAASEGW--EAVLVEKDPEAVRLLKENVRRT----GLGARVVALPVEVFLPEAKAQGERFTVA 114 (171)
T ss_dssp TCCEEEEETCSSCHHHHHHHHTTC--EEEEECCCHHHHHHHHHHHHHH----TCCCEEECSCHHHHHHHHHHTTCCEEEE
T ss_pred CCCeEEEeCCCcCHHHHHHHHCCC--eEEEEeCCHHHHHHHHHHHHHc----CCceEEEeccHHHHHHhhhccCCceEEE
Confidence 567999999999999999999987 6999999999999999998876 22899999998763 2 1 13479999
Q ss_pred EeccccccCCChHHHHHHHH--hcccCCcEEEEEeeccCC
Q 018740 253 HAGAAIHCWSSPSTGVAEIS--RVLRPGGVFVGTTYIVDG 290 (351)
Q Consensus 253 ~~~~vl~h~~d~~~~l~~i~--~~LkpgG~li~~~~~~~~ 290 (351)
++...++ .+....++.+. ++|+|||++++.++..+.
T Consensus 115 ~~~~~~~--~~~~~~~~~~~~~~~L~~gG~~~~~~~~~~~ 152 (171)
T 1ws6_A 115 FMAPPYA--MDLAALFGELLASGLVEAGGLYVLQHPKDLY 152 (171)
T ss_dssp EECCCTT--SCTTHHHHHHHHHTCEEEEEEEEEEEETTSC
T ss_pred EECCCCc--hhHHHHHHHHHhhcccCCCcEEEEEeCCccC
Confidence 9988765 55666777777 999999999998887543
No 155
>3q7e_A Protein arginine N-methyltransferase 1; HET: SAH; 2.20A {Rattus norvegicus} PDB: 1orh_A* 1ori_A* 1or8_A*
Probab=99.58 E-value=1.1e-14 Score=136.20 Aligned_cols=107 Identities=14% Similarity=0.266 Sum_probs=90.6
Q ss_pred CCCCCeEEEEcCccCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHhhhCCCCCCCeEEEEecCCCCCCCCCceeeEEe
Q 018740 175 PVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLPFASSSIDAVHA 254 (351)
Q Consensus 175 ~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~g~~~~~i~~~~~d~~~lp~~~~~fD~V~~ 254 (351)
..++.+|||||||+|.++..+++.+ ..+|+|+|+|+ +++.|++++... +. ..++.++.+|+.++++++++||+|++
T Consensus 64 ~~~~~~VLDvGcG~G~~~~~la~~g-~~~v~gvD~s~-~l~~a~~~~~~~-~~-~~~v~~~~~d~~~~~~~~~~fD~Iis 139 (349)
T 3q7e_A 64 LFKDKVVLDVGSGTGILCMFAAKAG-ARKVIGIECSS-ISDYAVKIVKAN-KL-DHVVTIIKGKVEEVELPVEKVDIIIS 139 (349)
T ss_dssp HHTTCEEEEESCTTSHHHHHHHHTT-CSEEEEEECST-HHHHHHHHHHHT-TC-TTTEEEEESCTTTCCCSSSCEEEEEE
T ss_pred cCCCCEEEEEeccchHHHHHHHHCC-CCEEEEECcHH-HHHHHHHHHHHc-CC-CCcEEEEECcHHHccCCCCceEEEEE
Confidence 3457899999999999999999984 45999999995 999999988776 22 34599999999999988899999999
Q ss_pred ccc---cccCCChHHHHHHHHhcccCCcEEEEEe
Q 018740 255 GAA---IHCWSSPSTGVAEISRVLRPGGVFVGTT 285 (351)
Q Consensus 255 ~~v---l~h~~d~~~~l~~i~~~LkpgG~li~~~ 285 (351)
..+ +++..++..+++++.++|||||+++...
T Consensus 140 ~~~~~~l~~~~~~~~~l~~~~r~LkpgG~li~~~ 173 (349)
T 3q7e_A 140 EWMGYCLFYESMLNTVLHARDKWLAPDGLIFPDR 173 (349)
T ss_dssp CCCBBTBTBTCCHHHHHHHHHHHEEEEEEEESCE
T ss_pred ccccccccCchhHHHHHHHHHHhCCCCCEEcccc
Confidence 765 4444788899999999999999987533
No 156
>2h00_A Methyltransferase 10 domain containing protein; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.54
Probab=99.58 E-value=1.4e-14 Score=129.36 Aligned_cols=146 Identities=14% Similarity=0.063 Sum_probs=97.9
Q ss_pred CCCeEEEEcCccCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHhhhCCCCCCCeEEEEecCCCC---CCC---CCcee
Q 018740 177 LGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRL---PFA---SSSID 250 (351)
Q Consensus 177 ~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~g~~~~~i~~~~~d~~~l---p~~---~~~fD 250 (351)
++.+|||+|||+|.++..++...+..+|+|+|+|+.|++.|++++... +. ..++.++++|+.+. +++ +++||
T Consensus 65 ~~~~vLDlG~G~G~~~~~la~~~~~~~v~gvD~s~~~~~~a~~~~~~~-~~-~~~v~~~~~d~~~~~~~~~~~~~~~~fD 142 (254)
T 2h00_A 65 TLRRGIDIGTGASCIYPLLGATLNGWYFLATEVDDMCFNYAKKNVEQN-NL-SDLIKVVKVPQKTLLMDALKEESEIIYD 142 (254)
T ss_dssp CCCEEEEESCTTTTHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHHT-TC-TTTEEEEECCTTCSSTTTSTTCCSCCBS
T ss_pred CCCEEEEeCCChhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHHc-CC-CccEEEEEcchhhhhhhhhhcccCCccc
Confidence 467999999999999998888754569999999999999999998776 22 23599999997652 344 26899
Q ss_pred eEEeccccccCC--------------Ch-HHHHHHHHhcccCCcEEEEEeeccCCCCCcchHHHHHHHHHhh----ccCC
Q 018740 251 AVHAGAAIHCWS--------------SP-STGVAEISRVLRPGGVFVGTTYIVDGPFNLIPFSRLLRQNMMQ----ISGS 311 (351)
Q Consensus 251 ~V~~~~vl~h~~--------------d~-~~~l~~i~~~LkpgG~li~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~ 311 (351)
+|+++-.+++.. .+ ..++.+++++|||||.+.+.... .......... ....
T Consensus 143 ~i~~npp~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~LkpgG~l~~~~~~----------~~~~~~~l~~~g~~~~~~ 212 (254)
T 2h00_A 143 FCMCNPPFFANQLEAKGVNSRNPRRPPPSSVNTGGITEIMAEGGELEFVKRI----------IHDSLQLKKRLRWYSCML 212 (254)
T ss_dssp EEEECCCCC-------------------------CTTTTHHHHTHHHHHHHH----------HHHHHHHGGGBSCEEEEE
T ss_pred EEEECCCCccCcchhcccccccccccCCHHHHhhhHHHHEecCCEEEEEHHH----------HHHHHhcccceEEEEECC
Confidence 999985554432 11 24578899999999987664321 1111111111 0111
Q ss_pred ccCCCHHHHHHHHHHCCCeEEEE
Q 018740 312 YTFLSEREIEDLCRACGLVDFKC 334 (351)
Q Consensus 312 ~~~~s~~~l~~ll~~aGf~~v~~ 334 (351)
....+.+++.++++++||..++.
T Consensus 213 ~~~~~~~~~~~~l~~~Gf~~v~~ 235 (254)
T 2h00_A 213 GKKCSLAPLKEELRIQGVPKVTY 235 (254)
T ss_dssp SSTTSHHHHHHHHHHTTCSEEEE
T ss_pred CChhHHHHHHHHHHHcCCCceEE
Confidence 12234478999999999988763
No 157
>3gnl_A Uncharacterized protein, DUF633, LMOF2365_1472; structural genomics, PSI-2, protein structure initiative; 1.50A {Listeria monocytogenes str}
Probab=99.58 E-value=5.9e-14 Score=123.55 Aligned_cols=148 Identities=10% Similarity=0.073 Sum_probs=113.5
Q ss_pred HHHHHhccCCCCCCeEEEEcCccCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHhhhCCCCCCCeEEEEecCCCCCCC
Q 018740 166 FELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLPFA 245 (351)
Q Consensus 166 ~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~g~~~~~i~~~~~d~~~lp~~ 245 (351)
++.+..++.+ +.+|||||||+|.++..+++.++..+|+++|+++.+++.|++++... |. ..++.+..+|..+...+
T Consensus 12 L~~i~~~v~~--g~~VlDIGtGsG~l~i~la~~~~~~~V~avDi~~~al~~A~~N~~~~-gl-~~~I~v~~gD~l~~~~~ 87 (244)
T 3gnl_A 12 LEKVASYITK--NERIADIGSDHAYLPCFAVKNQTASFAIAGEVVDGPFQSAQKQVRSS-GL-TEQIDVRKGNGLAVIEK 87 (244)
T ss_dssp HHHHHTTCCS--SEEEEEETCSTTHHHHHHHHTTSEEEEEEEESSHHHHHHHHHHHHHT-TC-TTTEEEEECSGGGGCCG
T ss_pred HHHHHHhCCC--CCEEEEECCccHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHc-CC-CceEEEEecchhhccCc
Confidence 3566667664 67999999999999999999987678999999999999999999887 32 35699999999776544
Q ss_pred CCceeeEEeccccccCCChHHHHHHHHhcccCCcEEEEEeeccCCCCCcchHHHHHHHHHhhccCCccCCCHHHHHHHHH
Q 018740 246 SSSIDAVHAGAAIHCWSSPSTGVAEISRVLRPGGVFVGTTYIVDGPFNLIPFSRLLRQNMMQISGSYTFLSEREIEDLCR 325 (351)
Q Consensus 246 ~~~fD~V~~~~vl~h~~d~~~~l~~i~~~LkpgG~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~~ll~ 325 (351)
+..||+|+..++.-. -...+|.+..+.|+++|+|++.... ..+.++++|.
T Consensus 88 ~~~~D~IviagmGg~--lI~~IL~~~~~~L~~~~~lIlq~~~----------------------------~~~~lr~~L~ 137 (244)
T 3gnl_A 88 KDAIDTIVIAGMGGT--LIRTILEEGAAKLAGVTKLILQPNI----------------------------AAWQLREWSE 137 (244)
T ss_dssp GGCCCEEEEEEECHH--HHHHHHHHTGGGGTTCCEEEEEESS----------------------------CHHHHHHHHH
T ss_pred cccccEEEEeCCchH--HHHHHHHHHHHHhCCCCEEEEEcCC----------------------------ChHHHHHHHH
Confidence 446999987655321 1346788999999999999985321 4578999999
Q ss_pred HCCCeEEEE---EecC-eEEEEEEec
Q 018740 326 ACGLVDFKC---TRNR-GFVMFTATK 347 (351)
Q Consensus 326 ~aGf~~v~~---~~~g-~~~~~~a~k 347 (351)
+.||.+++. ...+ .|.++.+.+
T Consensus 138 ~~Gf~i~~E~lv~e~~k~Yeii~~~~ 163 (244)
T 3gnl_A 138 QNNWLITSEAILREDNKVYEIMVLAP 163 (244)
T ss_dssp HHTEEEEEEEEEEETTEEEEEEEEEE
T ss_pred HCCCEEEEEEEEEECCEEEEEEEEEe
Confidence 999998772 3444 444555544
No 158
>3kr9_A SAM-dependent methyltransferase; class I rossmann-like methyltransferase fold; 2.00A {Streptococcus pneumoniae} PDB: 3ku1_A*
Probab=99.57 E-value=8.7e-14 Score=121.25 Aligned_cols=146 Identities=10% Similarity=0.081 Sum_probs=111.6
Q ss_pred HHHHhccCCCCCCeEEEEcCccCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHhhhCCCCCCCeEEEEecCC-CCCCC
Q 018740 167 ELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADIS-RLPFA 245 (351)
Q Consensus 167 ~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~g~~~~~i~~~~~d~~-~lp~~ 245 (351)
+.+..++.+ +.+|||||||+|.++..+++.++..+|+++|+++.+++.|++++..+ |. ..++++..+|.. .++.
T Consensus 7 ~~l~~~v~~--g~~VlDIGtGsG~l~i~la~~~~~~~V~avDi~~~al~~A~~N~~~~-gl-~~~i~~~~~d~l~~l~~- 81 (225)
T 3kr9_A 7 ELVASFVSQ--GAILLDVGSDHAYLPIELVERGQIKSAIAGEVVEGPYQSAVKNVEAH-GL-KEKIQVRLANGLAAFEE- 81 (225)
T ss_dssp HHHHTTSCT--TEEEEEETCSTTHHHHHHHHTTSEEEEEEEESSHHHHHHHHHHHHHT-TC-TTTEEEEECSGGGGCCG-
T ss_pred HHHHHhCCC--CCEEEEeCCCcHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHc-CC-CceEEEEECchhhhccc-
Confidence 456666654 67999999999999999999987778999999999999999999887 32 347999999985 3442
Q ss_pred CCceeeEEeccccccCCChHHHHHHHHhcccCCcEEEEEeeccCCCCCcchHHHHHHHHHhhccCCccCCCHHHHHHHHH
Q 018740 246 SSSIDAVHAGAAIHCWSSPSTGVAEISRVLRPGGVFVGTTYIVDGPFNLIPFSRLLRQNMMQISGSYTFLSEREIEDLCR 325 (351)
Q Consensus 246 ~~~fD~V~~~~vl~h~~d~~~~l~~i~~~LkpgG~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~~ll~ 325 (351)
...||+|+..++--. -...+|.+..+.|+|+|++++... -..+.++++|.
T Consensus 82 ~~~~D~IviaG~Gg~--~i~~Il~~~~~~L~~~~~lVlq~~----------------------------~~~~~vr~~L~ 131 (225)
T 3kr9_A 82 TDQVSVITIAGMGGR--LIARILEEGLGKLANVERLILQPN----------------------------NREDDLRIWLQ 131 (225)
T ss_dssp GGCCCEEEEEEECHH--HHHHHHHHTGGGCTTCCEEEEEES----------------------------SCHHHHHHHHH
T ss_pred CcCCCEEEEcCCChH--HHHHHHHHHHHHhCCCCEEEEECC----------------------------CCHHHHHHHHH
Confidence 226999987665321 135779999999999999988422 14578999999
Q ss_pred HCCCeEEEE---EecCe-EEEEEEec
Q 018740 326 ACGLVDFKC---TRNRG-FVMFTATK 347 (351)
Q Consensus 326 ~aGf~~v~~---~~~g~-~~~~~a~k 347 (351)
+.||.+++. ...+. |.++.+.+
T Consensus 132 ~~Gf~i~~e~lv~e~~~~Yeii~~~~ 157 (225)
T 3kr9_A 132 DHGFQIVAESILEEAGKFYEILVVEA 157 (225)
T ss_dssp HTTEEEEEEEEEEETTEEEEEEEEEE
T ss_pred HCCCEEEEEEEEEECCEEEEEEEEEe
Confidence 999998884 34554 44544443
No 159
>1ixk_A Methyltransferase; open beta sheet; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.38
Probab=99.57 E-value=2.4e-14 Score=132.02 Aligned_cols=118 Identities=19% Similarity=0.175 Sum_probs=94.0
Q ss_pred HHHHhccCCCCCCeEEEEcCccCHHHHHHHHhCC-CCeEEEEeCCHHHHHHHHHHHhhhCCCCCCCeEEEEecCCCCCCC
Q 018740 167 ELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGL-FSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLPFA 245 (351)
Q Consensus 167 ~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~-~~~v~gvD~s~~~~~~a~~~~~~~~g~~~~~i~~~~~d~~~lp~~ 245 (351)
..+...+...++.+|||+|||+|..+..+++..+ ..+|+|+|+|+.+++.+++++... | ..++.++++|+..++..
T Consensus 108 ~l~~~~l~~~~g~~VLDlg~G~G~~t~~la~~~~~~~~v~avD~s~~~l~~a~~~~~~~-g--~~~v~~~~~D~~~~~~~ 184 (315)
T 1ixk_A 108 MYPPVALDPKPGEIVADMAAAPGGKTSYLAQLMRNDGVIYAFDVDENRLRETRLNLSRL-G--VLNVILFHSSSLHIGEL 184 (315)
T ss_dssp HHHHHHHCCCTTCEEEECCSSCSHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHH-T--CCSEEEESSCGGGGGGG
T ss_pred HHHHHHhCCCCCCEEEEeCCCCCHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHHHHh-C--CCeEEEEECChhhcccc
Confidence 3445566777889999999999999999998743 469999999999999999998876 2 35899999999887655
Q ss_pred CCceeeEEec------cccccCCCh----------------HHHHHHHHhcccCCcEEEEEeec
Q 018740 246 SSSIDAVHAG------AAIHCWSSP----------------STGVAEISRVLRPGGVFVGTTYI 287 (351)
Q Consensus 246 ~~~fD~V~~~------~vl~h~~d~----------------~~~l~~i~~~LkpgG~li~~~~~ 287 (351)
+++||+|++. +++++.++. ..+|+++.++|||||++++++..
T Consensus 185 ~~~fD~Il~d~Pcsg~g~~~~~p~~~~~~~~~~~~~~~~~q~~~L~~~~~~LkpGG~lv~stcs 248 (315)
T 1ixk_A 185 NVEFDKILLDAPCTGSGTIHKNPERKWNRTMDDIKFCQGLQMRLLEKGLEVLKPGGILVYSTCS 248 (315)
T ss_dssp CCCEEEEEEECCTTSTTTCC--------CCHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEESC
T ss_pred cccCCEEEEeCCCCCcccccCChhHhhcCCHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEEeCC
Confidence 6789999983 344443321 48899999999999999998754
No 160
>2pjd_A Ribosomal RNA small subunit methyltransferase C; gene duplication, RNA modification, SAM binding; 2.10A {Escherichia coli}
Probab=99.57 E-value=5.9e-15 Score=137.76 Aligned_cols=117 Identities=17% Similarity=0.222 Sum_probs=98.7
Q ss_pred HHHHHHhccCCCCCCeEEEEcCccCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHhhhCCCCCCCeEEEEecCCCCCC
Q 018740 165 EFELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLPF 244 (351)
Q Consensus 165 ~~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~g~~~~~i~~~~~d~~~lp~ 244 (351)
..+.+.+.+...++.+|||+|||+|.++..+++.++..+|+|+|+|+.+++.+++++... ...+.++.+|+...+
T Consensus 184 ~~~~ll~~l~~~~~~~VLDlGcG~G~~~~~la~~~~~~~v~~vD~s~~~l~~a~~~~~~~----~~~~~~~~~d~~~~~- 258 (343)
T 2pjd_A 184 GSQLLLSTLTPHTKGKVLDVGCGAGVLSVAFARHSPKIRLTLCDVSAPAVEASRATLAAN----GVEGEVFASNVFSEV- 258 (343)
T ss_dssp HHHHHHHHSCTTCCSBCCBTTCTTSHHHHHHHHHCTTCBCEEEESBHHHHHHHHHHHHHT----TCCCEEEECSTTTTC-
T ss_pred HHHHHHHhcCcCCCCeEEEecCccCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHh----CCCCEEEEccccccc-
Confidence 345666777555677999999999999999999987779999999999999999998876 345778889987654
Q ss_pred CCCceeeEEecccccc-----CCChHHHHHHHHhcccCCcEEEEEeec
Q 018740 245 ASSSIDAVHAGAAIHC-----WSSPSTGVAEISRVLRPGGVFVGTTYI 287 (351)
Q Consensus 245 ~~~~fD~V~~~~vl~h-----~~d~~~~l~~i~~~LkpgG~li~~~~~ 287 (351)
+++||+|+++..+|+ ..+...+++++.++|+|||.+++....
T Consensus 259 -~~~fD~Iv~~~~~~~g~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~ 305 (343)
T 2pjd_A 259 -KGRFDMIISNPPFHDGMQTSLDAAQTLIRGAVRHLNSGGELRIVANA 305 (343)
T ss_dssp -CSCEEEEEECCCCCSSSHHHHHHHHHHHHHHGGGEEEEEEEEEEEET
T ss_pred -cCCeeEEEECCCcccCccCCHHHHHHHHHHHHHhCCCCcEEEEEEcC
Confidence 678999999999885 335678999999999999999998764
No 161
>2fpo_A Methylase YHHF; structural genomics, putative methyltransferase, PSI, protei structure initiative; HET: MSE; 2.05A {Escherichia coli} SCOP: c.66.1.46
Probab=99.57 E-value=9.5e-15 Score=126.01 Aligned_cols=107 Identities=9% Similarity=0.051 Sum_probs=89.2
Q ss_pred CCCeEEEEcCccCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHhhhCCCCCCCeEEEEecCCC-CCCCCCceeeEEec
Q 018740 177 LGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISR-LPFASSSIDAVHAG 255 (351)
Q Consensus 177 ~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~g~~~~~i~~~~~d~~~-lp~~~~~fD~V~~~ 255 (351)
++.+|||+|||+|.++..++..+. .+|+|+|+|+.|++.|++++... + ..+++++++|+.+ ++..+++||+|++.
T Consensus 54 ~~~~vLDlgcG~G~~~~~l~~~~~-~~V~~vD~s~~~l~~a~~~~~~~-~--~~~v~~~~~D~~~~~~~~~~~fD~V~~~ 129 (202)
T 2fpo_A 54 VDAQCLDCFAGSGALGLEALSRYA-AGATLIEMDRAVSQQLIKNLATL-K--AGNARVVNSNAMSFLAQKGTPHNIVFVD 129 (202)
T ss_dssp TTCEEEETTCTTCHHHHHHHHTTC-SEEEEECSCHHHHHHHHHHHHHT-T--CCSEEEECSCHHHHHSSCCCCEEEEEEC
T ss_pred CCCeEEEeCCCcCHHHHHHHhcCC-CEEEEEECCHHHHHHHHHHHHHc-C--CCcEEEEECCHHHHHhhcCCCCCEEEEC
Confidence 467999999999999998777763 48999999999999999998876 2 2689999999876 45566789999998
Q ss_pred cccccCCChHHHHHHHHh--cccCCcEEEEEeecc
Q 018740 256 AAIHCWSSPSTGVAEISR--VLRPGGVFVGTTYIV 288 (351)
Q Consensus 256 ~vl~h~~d~~~~l~~i~~--~LkpgG~li~~~~~~ 288 (351)
..+ |..+...+++++.+ +|+|||++++.....
T Consensus 130 ~p~-~~~~~~~~l~~l~~~~~L~pgG~l~i~~~~~ 163 (202)
T 2fpo_A 130 PPF-RRGLLEETINLLEDNGWLADEALIYVESEVE 163 (202)
T ss_dssp CSS-STTTHHHHHHHHHHTTCEEEEEEEEEEEEGG
T ss_pred CCC-CCCcHHHHHHHHHhcCccCCCcEEEEEECCC
Confidence 774 45677788888866 599999999887653
No 162
>3bzb_A Uncharacterized protein; RED ALGA, protein structure initiat center for eukaryotic structural genomics, CESG, structural genomics; 2.79A {Cyanidioschyzon merolae}
Probab=99.57 E-value=4.7e-14 Score=127.97 Aligned_cols=147 Identities=16% Similarity=0.118 Sum_probs=105.0
Q ss_pred HHHHHHhccCCCCCCeEEEEcCccCHHHHHHHHhCCCCeEEEEeC-CHHHHHHHHHHHh-----hhCCCC---CCCeEEE
Q 018740 165 EFELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDY-SENMLKQCYEFVQ-----QESNFP---KENFLLV 235 (351)
Q Consensus 165 ~~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~-s~~~~~~a~~~~~-----~~~g~~---~~~i~~~ 235 (351)
+.+.+.......++.+|||+|||+|.++..+++.+ ..+|+|+|+ |+.+++.+++++. .. +.. ..++.+.
T Consensus 67 l~~~l~~~~~~~~~~~vLDlG~G~G~~~~~~a~~~-~~~v~~~D~s~~~~~~~a~~n~~~N~~~~~-~~~~~~~~~v~~~ 144 (281)
T 3bzb_A 67 LADTLCWQPELIAGKTVCELGAGAGLVSIVAFLAG-ADQVVATDYPDPEILNSLESNIREHTANSC-SSETVKRASPKVV 144 (281)
T ss_dssp HHHHHHHCGGGTTTCEEEETTCTTSHHHHHHHHTT-CSEEEEEECSCHHHHHHHHHHHHTTCC-----------CCCEEE
T ss_pred HHHHHHhcchhcCCCeEEEecccccHHHHHHHHcC-CCEEEEEeCCCHHHHHHHHHHHHHhhhhhc-ccccCCCCCeEEE
Confidence 34555555544567899999999999999998876 358999999 8999999999883 32 110 0368888
Q ss_pred EecCCCCC--C----CCCceeeEEeccccccCCChHHHHHHHHhccc---C--CcEEEEEeeccCCCCCcchHHHHHHHH
Q 018740 236 RADISRLP--F----ASSSIDAVHAGAAIHCWSSPSTGVAEISRVLR---P--GGVFVGTTYIVDGPFNLIPFSRLLRQN 304 (351)
Q Consensus 236 ~~d~~~lp--~----~~~~fD~V~~~~vl~h~~d~~~~l~~i~~~Lk---p--gG~li~~~~~~~~~~~~~~~~~~~~~~ 304 (351)
..+..+.. + .+++||+|++..+++|.++...+++.+.++|+ | ||.+++...... +..
T Consensus 145 ~~~~~~~~~~~~~~~~~~~fD~Ii~~dvl~~~~~~~~ll~~l~~~Lk~~~p~~gG~l~v~~~~~~------~~~------ 212 (281)
T 3bzb_A 145 PYRWGDSPDSLQRCTGLQRFQVVLLADLLSFHQAHDALLRSVKMLLALPANDPTAVALVTFTHHR------PHL------ 212 (281)
T ss_dssp ECCTTSCTHHHHHHHSCSSBSEEEEESCCSCGGGHHHHHHHHHHHBCCTTTCTTCEEEEEECC-----------------
T ss_pred EecCCCccHHHHhhccCCCCCEEEEeCcccChHHHHHHHHHHHHHhcccCCCCCCEEEEEEEeee------ccc------
Confidence 76654421 1 35789999999999999999999999999999 9 998877432211 000
Q ss_pred HhhccCCccCCCHHHHHHHHHHCC-CeEEEE
Q 018740 305 MMQISGSYTFLSEREIEDLCRACG-LVDFKC 334 (351)
Q Consensus 305 ~~~~~~~~~~~s~~~l~~ll~~aG-f~~v~~ 334 (351)
......+.+.+++.| |.+.+.
T Consensus 213 ---------~~~~~~~~~~l~~~G~f~v~~~ 234 (281)
T 3bzb_A 213 ---------AERDLAFFRLVNADGALIAEPW 234 (281)
T ss_dssp ------------CTHHHHHHHHSTTEEEEEE
T ss_pred ---------chhHHHHHHHHHhcCCEEEEEe
Confidence 001245667888889 887765
No 163
>2esr_A Methyltransferase; structural genomics, hypothetical protein, streptococcus PYO PSI, protein structure initiative; HET: GLC; 1.80A {Streptococcus pyogenes} SCOP: c.66.1.46
Probab=99.56 E-value=5.7e-15 Score=124.28 Aligned_cols=120 Identities=14% Similarity=0.155 Sum_probs=92.7
Q ss_pred HHHHHhccC-CCCCCeEEEEcCccCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHhhhCCCCCCCeEEEEecCCC-CC
Q 018740 166 FELMKGYLK-PVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISR-LP 243 (351)
Q Consensus 166 ~~~l~~~l~-~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~g~~~~~i~~~~~d~~~-lp 243 (351)
.+.+...+. ..++.+|||+|||+|.++..+++.+ ..+|+|+|+|+.+++.|++++... +. ..++.++.+|+.+ ++
T Consensus 19 ~~~~~~~l~~~~~~~~vLDlGcG~G~~~~~l~~~~-~~~v~~vD~~~~~~~~a~~~~~~~-~~-~~~~~~~~~d~~~~~~ 95 (177)
T 2esr_A 19 RGAIFNMIGPYFNGGRVLDLFAGSGGLAIEAVSRG-MSAAVLVEKNRKAQAIIQDNIIMT-KA-ENRFTLLKMEAERAID 95 (177)
T ss_dssp HHHHHHHHCSCCCSCEEEEETCTTCHHHHHHHHTT-CCEEEEECCCHHHHHHHHHHHHTT-TC-GGGEEEECSCHHHHHH
T ss_pred HHHHHHHHHhhcCCCeEEEeCCCCCHHHHHHHHcC-CCEEEEEECCHHHHHHHHHHHHHc-CC-CCceEEEECcHHHhHH
Confidence 344455554 4467899999999999999999884 459999999999999999998765 21 2479999999877 34
Q ss_pred CCCCceeeEEeccccccCCChHHHHHHHH--hcccCCcEEEEEeeccC
Q 018740 244 FASSSIDAVHAGAAIHCWSSPSTGVAEIS--RVLRPGGVFVGTTYIVD 289 (351)
Q Consensus 244 ~~~~~fD~V~~~~vl~h~~d~~~~l~~i~--~~LkpgG~li~~~~~~~ 289 (351)
..+++||+|++...+++ .+....++.+. ++|+|||++++.+....
T Consensus 96 ~~~~~fD~i~~~~~~~~-~~~~~~~~~l~~~~~L~~gG~l~~~~~~~~ 142 (177)
T 2esr_A 96 CLTGRFDLVFLDPPYAK-ETIVATIEALAAKNLLSEQVMVVCETDKTV 142 (177)
T ss_dssp HBCSCEEEEEECCSSHH-HHHHHHHHHHHHTTCEEEEEEEEEEEETTC
T ss_pred hhcCCCCEEEECCCCCc-chHHHHHHHHHhCCCcCCCcEEEEEECCcc
Confidence 44567999999866532 34456677776 99999999999887643
No 164
>2fhp_A Methylase, putative; alpha-beta-alpha sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Enterococcus faecalis} SCOP: c.66.1.46
Probab=99.56 E-value=2e-14 Score=121.70 Aligned_cols=123 Identities=18% Similarity=0.128 Sum_probs=96.0
Q ss_pred HHHHHHHHhccC-CCCCCeEEEEcCccCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHhhhCCCCCCCeEEEEecCCC
Q 018740 163 EKEFELMKGYLK-PVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISR 241 (351)
Q Consensus 163 ~~~~~~l~~~l~-~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~g~~~~~i~~~~~d~~~ 241 (351)
+...+.+...+. ..++.+|||+|||+|.++..+++.+ ..+|+|+|+|+.+++.|++++... +. ..+++++.+|+.+
T Consensus 29 ~~~~~~~~~~l~~~~~~~~vLD~GcG~G~~~~~~~~~~-~~~v~~vD~~~~~~~~a~~~~~~~-~~-~~~~~~~~~d~~~ 105 (187)
T 2fhp_A 29 DKVKESIFNMIGPYFDGGMALDLYSGSGGLAIEAVSRG-MDKSICIEKNFAALKVIKENIAIT-KE-PEKFEVRKMDANR 105 (187)
T ss_dssp HHHHHHHHHHHCSCCSSCEEEETTCTTCHHHHHHHHTT-CSEEEEEESCHHHHHHHHHHHHHH-TC-GGGEEEEESCHHH
T ss_pred HHHHHHHHHHHHhhcCCCCEEEeCCccCHHHHHHHHcC-CCEEEEEECCHHHHHHHHHHHHHh-CC-CcceEEEECcHHH
Confidence 444455555553 3467899999999999999888864 359999999999999999998776 11 2579999999876
Q ss_pred CC----CCCCceeeEEeccccccCCChHHHHHHH--HhcccCCcEEEEEeeccC
Q 018740 242 LP----FASSSIDAVHAGAAIHCWSSPSTGVAEI--SRVLRPGGVFVGTTYIVD 289 (351)
Q Consensus 242 lp----~~~~~fD~V~~~~vl~h~~d~~~~l~~i--~~~LkpgG~li~~~~~~~ 289 (351)
.. ..+++||+|++...++ ..+....++.+ .++|+|||++++..+...
T Consensus 106 ~~~~~~~~~~~fD~i~~~~~~~-~~~~~~~~~~l~~~~~L~~gG~l~~~~~~~~ 158 (187)
T 2fhp_A 106 ALEQFYEEKLQFDLVLLDPPYA-KQEIVSQLEKMLERQLLTNEAVIVCETDKTV 158 (187)
T ss_dssp HHHHHHHTTCCEEEEEECCCGG-GCCHHHHHHHHHHTTCEEEEEEEEEEEETTC
T ss_pred HHHHHHhcCCCCCEEEECCCCC-chhHHHHHHHHHHhcccCCCCEEEEEeCCcc
Confidence 32 2367899999987744 45677778888 899999999999877643
No 165
>1ej0_A FTSJ; methyltransferase, adoMet, adenosyl methionine, heat shock proteins, 23S ribosomal RNA; HET: SAM; 1.50A {Escherichia coli} SCOP: c.66.1.2 PDB: 1eiz_A*
Probab=99.56 E-value=6.5e-14 Score=116.95 Aligned_cols=100 Identities=20% Similarity=0.231 Sum_probs=86.4
Q ss_pred CCCCCeEEEEcCccCHHHHHHHHh-CCCCeEEEEeCCHHHHHHHHHHHhhhCCCCCCCeEEEEecCCCCC--------CC
Q 018740 175 PVLGGNIIDASCGSGLFSRIFAKS-GLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLP--------FA 245 (351)
Q Consensus 175 ~~~~~~vLDiGcG~G~~~~~l~~~-~~~~~v~gvD~s~~~~~~a~~~~~~~~g~~~~~i~~~~~d~~~lp--------~~ 245 (351)
..++.+|||+|||+|.++..+++. ++..+++|+|+++ +++ ..++.++.+|+.+.+ ++
T Consensus 20 ~~~~~~vLd~G~G~G~~~~~l~~~~~~~~~v~~~D~~~-~~~-------------~~~~~~~~~d~~~~~~~~~~~~~~~ 85 (180)
T 1ej0_A 20 FKPGMTVVDLGAAPGGWSQYVVTQIGGKGRIIACDLLP-MDP-------------IVGVDFLQGDFRDELVMKALLERVG 85 (180)
T ss_dssp CCTTCEEEEESCTTCHHHHHHHHHHCTTCEEEEEESSC-CCC-------------CTTEEEEESCTTSHHHHHHHHHHHT
T ss_pred CCCCCeEEEeCCCCCHHHHHHHHHhCCCCeEEEEECcc-ccc-------------cCcEEEEEcccccchhhhhhhccCC
Confidence 456789999999999999999988 5557999999999 642 357899999998876 67
Q ss_pred CCceeeEEeccccccCCCh-----------HHHHHHHHhcccCCcEEEEEeecc
Q 018740 246 SSSIDAVHAGAAIHCWSSP-----------STGVAEISRVLRPGGVFVGTTYIV 288 (351)
Q Consensus 246 ~~~fD~V~~~~vl~h~~d~-----------~~~l~~i~~~LkpgG~li~~~~~~ 288 (351)
+++||+|++...+++..++ ..+++++.++|+|||.+++.++..
T Consensus 86 ~~~~D~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~~ 139 (180)
T 1ej0_A 86 DSKVQVVMSDMAPNMSGTPAVDIPRAMYLVELALEMCRDVLAPGGSFVVKVFQG 139 (180)
T ss_dssp TCCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEESS
T ss_pred CCceeEEEECCCccccCCCccchHHHHHHHHHHHHHHHHHcCCCcEEEEEEecC
Confidence 7899999999999988776 688999999999999999987753
No 166
>3ntv_A MW1564 protein; rossmann fold, putative methyltransferase, transferase; HET: MSE; 1.55A {Staphylococcus aureus}
Probab=99.56 E-value=7.3e-14 Score=123.07 Aligned_cols=118 Identities=14% Similarity=0.181 Sum_probs=94.4
Q ss_pred HHHHHhccCCCCCCeEEEEcCccCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHhhhCCCCCCCeEEEEecCCCC-C-
Q 018740 166 FELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRL-P- 243 (351)
Q Consensus 166 ~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~g~~~~~i~~~~~d~~~l-p- 243 (351)
...+...+...++.+|||||||+|..+..+++..+..+|+++|+++.+++.|++++... +. ..++.++.+|+.+. +
T Consensus 60 ~~~l~~~~~~~~~~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~~~~~~~~a~~~~~~~-~~-~~~v~~~~~d~~~~~~~ 137 (232)
T 3ntv_A 60 LDLIKQLIRMNNVKNILEIGTAIGYSSMQFASISDDIHVTTIERNETMIQYAKQNLATY-HF-ENQVRIIEGNALEQFEN 137 (232)
T ss_dssp HHHHHHHHHHHTCCEEEEECCSSSHHHHHHHTTCTTCEEEEEECCHHHHHHHHHHHHHT-TC-TTTEEEEESCGGGCHHH
T ss_pred HHHHHHHHhhcCCCEEEEEeCchhHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHc-CC-CCcEEEEECCHHHHHHh
Confidence 34444444444578999999999999999999766779999999999999999998876 22 35899999999764 3
Q ss_pred CCCCceeeEEeccccccCCChHHHHHHHHhcccCCcEEEEEeecc
Q 018740 244 FASSSIDAVHAGAAIHCWSSPSTGVAEISRVLRPGGVFVGTTYIV 288 (351)
Q Consensus 244 ~~~~~fD~V~~~~vl~h~~d~~~~l~~i~~~LkpgG~li~~~~~~ 288 (351)
..+++||+|++... ..+...+++++.++|+|||++++.....
T Consensus 138 ~~~~~fD~V~~~~~---~~~~~~~l~~~~~~LkpgG~lv~d~~~~ 179 (232)
T 3ntv_A 138 VNDKVYDMIFIDAA---KAQSKKFFEIYTPLLKHQGLVITDNVLY 179 (232)
T ss_dssp HTTSCEEEEEEETT---SSSHHHHHHHHGGGEEEEEEEEEECTTG
T ss_pred hccCCccEEEEcCc---HHHHHHHHHHHHHhcCCCeEEEEeeCCc
Confidence 33688999997643 4466789999999999999998855443
No 167
>3r0q_C Probable protein arginine N-methyltransferase 4.2; arginine methyltransferase, methylation; HET: SAH; 2.61A {Arabidopsis thaliana}
Probab=99.55 E-value=2.6e-14 Score=134.97 Aligned_cols=115 Identities=17% Similarity=0.245 Sum_probs=95.2
Q ss_pred HHHHhccCCCCCCeEEEEcCccCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHhhhCCCCCCCeEEEEecCCCCCCCC
Q 018740 167 ELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLPFAS 246 (351)
Q Consensus 167 ~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~g~~~~~i~~~~~d~~~lp~~~ 246 (351)
+.+...+...++.+|||||||+|.++..+++.+. .+|+|+|+| .|++.|++++... +. ..++.++.+|+.+++++
T Consensus 53 ~~i~~~~~~~~~~~VLDlGcGtG~ls~~la~~g~-~~V~gvD~s-~~~~~a~~~~~~~-~~-~~~v~~~~~d~~~~~~~- 127 (376)
T 3r0q_C 53 NAVFQNKHHFEGKTVLDVGTGSGILAIWSAQAGA-RKVYAVEAT-KMADHARALVKAN-NL-DHIVEVIEGSVEDISLP- 127 (376)
T ss_dssp HHHHTTTTTTTTCEEEEESCTTTHHHHHHHHTTC-SEEEEEESS-TTHHHHHHHHHHT-TC-TTTEEEEESCGGGCCCS-
T ss_pred HHHHhccccCCCCEEEEeccCcCHHHHHHHhcCC-CEEEEEccH-HHHHHHHHHHHHc-CC-CCeEEEEECchhhcCcC-
Confidence 4555555666788999999999999999999863 599999999 9999999988776 22 35699999999998876
Q ss_pred CceeeEEeccccccC---CChHHHHHHHHhcccCCcEEEEEee
Q 018740 247 SSIDAVHAGAAIHCW---SSPSTGVAEISRVLRPGGVFVGTTY 286 (351)
Q Consensus 247 ~~fD~V~~~~vl~h~---~d~~~~l~~i~~~LkpgG~li~~~~ 286 (351)
++||+|++..+.+++ .++..+++++.++|+|||++++...
T Consensus 128 ~~~D~Iv~~~~~~~l~~e~~~~~~l~~~~~~LkpgG~li~~~~ 170 (376)
T 3r0q_C 128 EKVDVIISEWMGYFLLRESMFDSVISARDRWLKPTGVMYPSHA 170 (376)
T ss_dssp SCEEEEEECCCBTTBTTTCTHHHHHHHHHHHEEEEEEEESSEE
T ss_pred CcceEEEEcChhhcccchHHHHHHHHHHHhhCCCCeEEEEecC
Confidence 889999996655544 5678899999999999999987544
No 168
>3tfw_A Putative O-methyltransferase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Klebsiella pneumoniae subsp}
Probab=99.55 E-value=7.5e-14 Score=124.29 Aligned_cols=110 Identities=14% Similarity=0.125 Sum_probs=89.2
Q ss_pred CCCCCCeEEEEcCccCHHHHHHHHhCC-CCeEEEEeCCHHHHHHHHHHHhhhCCCCCCCeEEEEecCCC-CCCC--CCce
Q 018740 174 KPVLGGNIIDASCGSGLFSRIFAKSGL-FSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISR-LPFA--SSSI 249 (351)
Q Consensus 174 ~~~~~~~vLDiGcG~G~~~~~l~~~~~-~~~v~gvD~s~~~~~~a~~~~~~~~g~~~~~i~~~~~d~~~-lp~~--~~~f 249 (351)
...++.+|||||||+|..+..+++..+ ..+|+++|+|+.+++.|++++... |. ..++.++.+|+.+ ++.. .++|
T Consensus 60 ~~~~~~~VLdiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~-g~-~~~v~~~~~d~~~~l~~~~~~~~f 137 (248)
T 3tfw_A 60 RLTQAKRILEIGTLGGYSTIWMARELPADGQLLTLEADAHHAQVARENLQLA-GV-DQRVTLREGPALQSLESLGECPAF 137 (248)
T ss_dssp HHHTCSEEEEECCTTSHHHHHHHTTSCTTCEEEEEECCHHHHHHHHHHHHHT-TC-TTTEEEEESCHHHHHHTCCSCCCC
T ss_pred hhcCCCEEEEecCCchHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHc-CC-CCcEEEEEcCHHHHHHhcCCCCCe
Confidence 344577999999999999999999865 679999999999999999998876 22 3589999999866 3322 3489
Q ss_pred eeEEeccccccCCChHHHHHHHHhcccCCcEEEEEeecc
Q 018740 250 DAVHAGAAIHCWSSPSTGVAEISRVLRPGGVFVGTTYIV 288 (351)
Q Consensus 250 D~V~~~~vl~h~~d~~~~l~~i~~~LkpgG~li~~~~~~ 288 (351)
|+|++... ..+...+++++.++|+|||++++.....
T Consensus 138 D~V~~d~~---~~~~~~~l~~~~~~LkpGG~lv~~~~~~ 173 (248)
T 3tfw_A 138 DLIFIDAD---KPNNPHYLRWALRYSRPGTLIIGDNVVR 173 (248)
T ss_dssp SEEEECSC---GGGHHHHHHHHHHTCCTTCEEEEECCSG
T ss_pred EEEEECCc---hHHHHHHHHHHHHhcCCCeEEEEeCCCc
Confidence 99998653 3456788999999999999999876543
No 169
>2vdv_E TRNA (guanine-N(7)-)-methyltransferase; S-adenosyl-L-methionine, phosphorylation, M7G, spout MT, tRNA processing; HET: SAM; 2.30A {Saccharomyces cerevisiae} PDB: 2vdu_E
Probab=99.55 E-value=3.7e-14 Score=126.06 Aligned_cols=105 Identities=19% Similarity=0.263 Sum_probs=86.9
Q ss_pred CCCeEEEEcCccCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHhhhC--C---CCCCCeEEEEecCCC-CC--CCCCc
Q 018740 177 LGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQES--N---FPKENFLLVRADISR-LP--FASSS 248 (351)
Q Consensus 177 ~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~--g---~~~~~i~~~~~d~~~-lp--~~~~~ 248 (351)
++.+|||||||+|.++..+++.++..+|+|+|+|+.+++.+++++.... . .+..++.++.+|+.+ ++ ++.++
T Consensus 49 ~~~~vLDiGcG~G~~~~~la~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~nv~~~~~D~~~~l~~~~~~~~ 128 (246)
T 2vdv_E 49 KKVTIADIGCGFGGLMIDLSPAFPEDLILGMEIRVQVTNYVEDRIIALRNNTASKHGFQNINVLRGNAMKFLPNFFEKGQ 128 (246)
T ss_dssp CCEEEEEETCTTSHHHHHHHHHSTTSEEEEEESCHHHHHHHHHHHHHHHHTC-CCSTTTTEEEEECCTTSCGGGTSCTTC
T ss_pred CCCEEEEEcCCCCHHHHHHHHhCCCCCEEEEEcCHHHHHHHHHHHHHHhhccccccCCCcEEEEeccHHHHHHHhccccc
Confidence 4679999999999999999999887799999999999999998876531 0 013689999999987 66 66789
Q ss_pred eeeEEeccccccCCCh-------------HHHHHHHHhcccCCcEEEEEee
Q 018740 249 IDAVHAGAAIHCWSSP-------------STGVAEISRVLRPGGVFVGTTY 286 (351)
Q Consensus 249 fD~V~~~~vl~h~~d~-------------~~~l~~i~~~LkpgG~li~~~~ 286 (351)
+|.|+.. +++| ..+++++.++|+|||.+++.+.
T Consensus 129 ~d~v~~~-----~p~p~~k~~~~~~r~~~~~~l~~~~~~LkpgG~l~~~td 174 (246)
T 2vdv_E 129 LSKMFFC-----FPDPHFKQRKHKARIITNTLLSEYAYVLKEGGVVYTITD 174 (246)
T ss_dssp EEEEEEE-----SCCCC------CSSCCCHHHHHHHHHHEEEEEEEEEEES
T ss_pred cCEEEEE-----CCCcccccchhHHhhccHHHHHHHHHHcCCCCEEEEEec
Confidence 9999843 4555 4899999999999999999654
No 170
>1af7_A Chemotaxis receptor methyltransferase CHER; chemotaxis receptor methylation; HET: SAH; 2.00A {Salmonella typhimurium} SCOP: a.58.1.1 c.66.1.8 PDB: 1bc5_A*
Probab=99.54 E-value=1.5e-14 Score=130.28 Aligned_cols=107 Identities=12% Similarity=0.180 Sum_probs=84.1
Q ss_pred CCCeEEEEcCccCH----HHHHHHHh-CC---CCeEEEEeCCHHHHHHHHHHHhhh---CC-----------------CC
Q 018740 177 LGGNIIDASCGSGL----FSRIFAKS-GL---FSLVVALDYSENMLKQCYEFVQQE---SN-----------------FP 228 (351)
Q Consensus 177 ~~~~vLDiGcG~G~----~~~~l~~~-~~---~~~v~gvD~s~~~~~~a~~~~~~~---~g-----------------~~ 228 (351)
++.+|||+|||+|. ++..+++. +. ..+|+|+|+|+.|++.|++.+-.. ++ .+
T Consensus 105 ~~~rIld~GCgTGee~ysiAi~L~e~~~~~~~~~~I~atDis~~~L~~Ar~~~y~~~~~~~~~~~~~~~~f~~~~~~~~~ 184 (274)
T 1af7_A 105 GEYRVWSAAASTGEEPYSIAITLADALGMAPGRWKVFASDIDTEVLEKARSGIYRLSELKTLSPQQLQRYFMRGTGPHEG 184 (274)
T ss_dssp SCEEEEESCCTTTHHHHHHHHHHHHHHCSCTTSEEEEEEESCHHHHHHHHHTEEEGGGGTTSCHHHHHHHEEECCTTSCS
T ss_pred CCcEEEEeeccCChhHHHHHHHHHHhcccCCCCeEEEEEECCHHHHHHHHhcCCchhhhhcCCHHHHHHHhhccccCCCC
Confidence 35699999999998 45555555 21 248999999999999999864100 00 00
Q ss_pred --------CCCeEEEEecCCCCCCC-CCceeeEEeccccccCCCh--HHHHHHHHhcccCCcEEEE
Q 018740 229 --------KENFLLVRADISRLPFA-SSSIDAVHAGAAIHCWSSP--STGVAEISRVLRPGGVFVG 283 (351)
Q Consensus 229 --------~~~i~~~~~d~~~lp~~-~~~fD~V~~~~vl~h~~d~--~~~l~~i~~~LkpgG~li~ 283 (351)
..++.|.+.|+.+.|++ .++||+|+|.++++|+.++ .++++++++.|+|||+|++
T Consensus 185 ~~~v~~~lr~~V~F~~~dl~~~~~~~~~~fDlI~crnvliyf~~~~~~~vl~~~~~~L~pgG~L~l 250 (274)
T 1af7_A 185 LVRVRQELANYVEFSSVNLLEKQYNVPGPFDAIFCRNVMIYFDKTTQEDILRRFVPLLKPDGLLFA 250 (274)
T ss_dssp EEEECHHHHTTEEEEECCTTCSSCCCCCCEEEEEECSSGGGSCHHHHHHHHHHHGGGEEEEEEEEE
T ss_pred ceeechhhcccCeEEecccCCCCCCcCCCeeEEEECCchHhCCHHHHHHHHHHHHHHhCCCcEEEE
Confidence 03699999999887665 5789999999999999766 6999999999999999998
No 171
>1jg1_A PIMT;, protein-L-isoaspartate O-methyltransferase; rossmann methyltransferase, protein repair isomerization; HET: SAH; 1.20A {Pyrococcus furiosus} SCOP: c.66.1.7 PDB: 1jg2_A* 1jg3_A* 1jg4_A*
Probab=99.54 E-value=3.6e-14 Score=125.21 Aligned_cols=113 Identities=14% Similarity=0.147 Sum_probs=93.2
Q ss_pred HHHHHHhccCCCCCCeEEEEcCccCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHhhhCCCCCCCeEEEEecCCCCCC
Q 018740 165 EFELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLPF 244 (351)
Q Consensus 165 ~~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~g~~~~~i~~~~~d~~~lp~ 244 (351)
....+...+...++.+|||||||+|.++..+++.++ .+|+++|+++.+++.|++++... + ..++.+..+|+ ..++
T Consensus 79 ~~~~~~~~l~~~~~~~vLdiG~G~G~~~~~la~~~~-~~v~~vD~~~~~~~~a~~~~~~~-~--~~~v~~~~~d~-~~~~ 153 (235)
T 1jg1_A 79 MVAIMLEIANLKPGMNILEVGTGSGWNAALISEIVK-TDVYTIERIPELVEFAKRNLERA-G--VKNVHVILGDG-SKGF 153 (235)
T ss_dssp HHHHHHHHHTCCTTCCEEEECCTTSHHHHHHHHHHC-SCEEEEESCHHHHHHHHHHHHHT-T--CCSEEEEESCG-GGCC
T ss_pred HHHHHHHhcCCCCCCEEEEEeCCcCHHHHHHHHHhC-CEEEEEeCCHHHHHHHHHHHHHc-C--CCCcEEEECCc-ccCC
Confidence 345566666777788999999999999999999874 59999999999999999988765 2 35799999997 3344
Q ss_pred CC-CceeeEEeccccccCCChHHHHHHHHhcccCCcEEEEEeecc
Q 018740 245 AS-SSIDAVHAGAAIHCWSSPSTGVAEISRVLRPGGVFVGTTYIV 288 (351)
Q Consensus 245 ~~-~~fD~V~~~~vl~h~~d~~~~l~~i~~~LkpgG~li~~~~~~ 288 (351)
++ ..||+|++..++++++ .++.++|+|||++++..+..
T Consensus 154 ~~~~~fD~Ii~~~~~~~~~------~~~~~~L~pgG~lvi~~~~~ 192 (235)
T 1jg1_A 154 PPKAPYDVIIVTAGAPKIP------EPLIEQLKIGGKLIIPVGSY 192 (235)
T ss_dssp GGGCCEEEEEECSBBSSCC------HHHHHTEEEEEEEEEEECSS
T ss_pred CCCCCccEEEECCcHHHHH------HHHHHhcCCCcEEEEEEecC
Confidence 44 3599999999999885 37889999999999988764
No 172
>3u81_A Catechol O-methyltransferase; neurotransmitter degradation, transferase transferase inhibitor complex; HET: SAH; 1.13A {Rattus norvegicus} SCOP: c.66.1.1 PDB: 3nwe_A* 3oe5_A* 3ozr_A* 3oe4_A* 3ozt_A* 3ozs_A* 3r6t_A* 3hvi_A* 1jr4_A* 1vid_A* 1h1d_A* 2cl5_A* 3hvh_A* 3hvj_A* 3hvk_A* 3nw9_A* 3nwb_A* 3s68_A* 2zlb_A 2zth_A* ...
Probab=99.54 E-value=7.9e-15 Score=128.20 Aligned_cols=117 Identities=9% Similarity=0.153 Sum_probs=91.8
Q ss_pred HHHhccCCCCCCeEEEEcCccCHHHHHHHHhC-CCCeEEEEeCCHHHHHHHHHHHhhhCCCCCCCeEEEEecCCC-CCCC
Q 018740 168 LMKGYLKPVLGGNIIDASCGSGLFSRIFAKSG-LFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISR-LPFA 245 (351)
Q Consensus 168 ~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~-~~~~v~gvD~s~~~~~~a~~~~~~~~g~~~~~i~~~~~d~~~-lp~~ 245 (351)
.+...+...++.+|||||||+|..+..+++.. +..+|+++|+++.+++.|++++... +. ..+++++.+|+.+ ++..
T Consensus 49 ~l~~l~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~-~~-~~~v~~~~~d~~~~l~~~ 126 (221)
T 3u81_A 49 IMDAVIREYSPSLVLELGAYCGYSAVRMARLLQPGARLLTMEINPDCAAITQQMLNFA-GL-QDKVTILNGASQDLIPQL 126 (221)
T ss_dssp HHHHHHHHHCCSEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHH-TC-GGGEEEEESCHHHHGGGT
T ss_pred HHHHHHHhcCCCEEEEECCCCCHHHHHHHHhCCCCCEEEEEeCChHHHHHHHHHHHHc-CC-CCceEEEECCHHHHHHHH
Confidence 33333333456799999999999999999863 3569999999999999999998876 22 3469999999854 3322
Q ss_pred C-----CceeeEEeccccccCCChHHHHHHHHhcccCCcEEEEEeec
Q 018740 246 S-----SSIDAVHAGAAIHCWSSPSTGVAEISRVLRPGGVFVGTTYI 287 (351)
Q Consensus 246 ~-----~~fD~V~~~~vl~h~~d~~~~l~~i~~~LkpgG~li~~~~~ 287 (351)
. ++||+|++....++..+...+++.+ ++|+|||++++.+..
T Consensus 127 ~~~~~~~~fD~V~~d~~~~~~~~~~~~~~~~-~~LkpgG~lv~~~~~ 172 (221)
T 3u81_A 127 KKKYDVDTLDMVFLDHWKDRYLPDTLLLEKC-GLLRKGTVLLADNVI 172 (221)
T ss_dssp TTTSCCCCCSEEEECSCGGGHHHHHHHHHHT-TCCCTTCEEEESCCC
T ss_pred HHhcCCCceEEEEEcCCcccchHHHHHHHhc-cccCCCeEEEEeCCC
Confidence 2 6899999998888876666778888 999999999985544
No 173
>3gdh_A Trimethylguanosine synthase homolog; M7G, CAP, dimethyltransferase, usnRNA, snoRNA, telomerase, cytoplasm, methyltransferase, nucleus; HET: MGP SAH; 2.00A {Homo sapiens} PDB: 3egi_A*
Probab=99.54 E-value=6.1e-16 Score=136.94 Aligned_cols=138 Identities=15% Similarity=0.128 Sum_probs=108.0
Q ss_pred CCCeEEEEcCccCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHhhhCCCCCCCeEEEEecCCCCCCCCCceeeEEecc
Q 018740 177 LGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLPFASSSIDAVHAGA 256 (351)
Q Consensus 177 ~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~g~~~~~i~~~~~d~~~lp~~~~~fD~V~~~~ 256 (351)
++.+|||+|||+|.++..+++.+. +|+|+|+|+.+++.|++++... +. ..++.++++|+.+++ ++++||+|++..
T Consensus 78 ~~~~vLD~gcG~G~~~~~la~~~~--~v~~vD~s~~~~~~a~~~~~~~-~~-~~~~~~~~~d~~~~~-~~~~~D~v~~~~ 152 (241)
T 3gdh_A 78 KCDVVVDAFCGVGGNTIQFALTGM--RVIAIDIDPVKIALARNNAEVY-GI-ADKIEFICGDFLLLA-SFLKADVVFLSP 152 (241)
T ss_dssp CCSEEEETTCTTSHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHHHT-TC-GGGEEEEESCHHHHG-GGCCCSEEEECC
T ss_pred CCCEEEECccccCHHHHHHHHcCC--EEEEEECCHHHHHHHHHHHHHc-CC-CcCeEEEECChHHhc-ccCCCCEEEECC
Confidence 578999999999999999999874 9999999999999999998876 11 158999999998876 567999999999
Q ss_pred ccccCCChHHHHHHHHhcccCCcEEEEEeeccCCCCCcchHHHHHHHHHhh-ccCCccCCCHHHHHHHHHHCCCeEEEE
Q 018740 257 AIHCWSSPSTGVAEISRVLRPGGVFVGTTYIVDGPFNLIPFSRLLRQNMMQ-ISGSYTFLSEREIEDLCRACGLVDFKC 334 (351)
Q Consensus 257 vl~h~~d~~~~l~~i~~~LkpgG~li~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~s~~~l~~ll~~aGf~~v~~ 334 (351)
.++|..++...+.++.++|+|||.+++..... .... ........+.+++..++...|...+..
T Consensus 153 ~~~~~~~~~~~~~~~~~~L~pgG~~i~~~~~~---------------~~~~~~~~lp~~~~~~~~~~~l~~~g~~~i~~ 216 (241)
T 3gdh_A 153 PWGGPDYATAETFDIRTMMSPDGFEIFRLSKK---------------ITNNIVYFLPRNADIDQVASLAGPGGQVEIEQ 216 (241)
T ss_dssp CCSSGGGGGSSSBCTTTSCSSCHHHHHHHHHH---------------HCSCEEEEEETTBCHHHHHHTTCTTCCEEEEE
T ss_pred CcCCcchhhhHHHHHHhhcCCcceeHHHHHHh---------------hCCceEEECCCCCCHHHHHHHhccCCCEEEEe
Confidence 99998888778889999999999866532211 0000 000123457788888888888766663
No 174
>1g6q_1 HnRNP arginine N-methyltransferase; SAM-binding domain, beta-barrel, mixed alpha-beta, hexamer; 2.90A {Saccharomyces cerevisiae} SCOP: c.66.1.6
Probab=99.53 E-value=4.6e-14 Score=130.87 Aligned_cols=105 Identities=21% Similarity=0.345 Sum_probs=88.7
Q ss_pred CCCCCeEEEEcCccCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHhhhCCCCCCCeEEEEecCCCCCCCCCceeeEEe
Q 018740 175 PVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLPFASSSIDAVHA 254 (351)
Q Consensus 175 ~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~g~~~~~i~~~~~d~~~lp~~~~~fD~V~~ 254 (351)
..++.+|||||||+|.++..+++.+ ..+|+|+|+| .+++.|++++... +. ..++.++.+|+.++++++++||+|++
T Consensus 36 ~~~~~~VLDiGcGtG~ls~~la~~g-~~~v~~vD~s-~~~~~a~~~~~~~-~~-~~~i~~~~~d~~~~~~~~~~~D~Ivs 111 (328)
T 1g6q_1 36 LFKDKIVLDVGCGTGILSMFAAKHG-AKHVIGVDMS-SIIEMAKELVELN-GF-SDKITLLRGKLEDVHLPFPKVDIIIS 111 (328)
T ss_dssp HHTTCEEEEETCTTSHHHHHHHHTC-CSEEEEEESS-THHHHHHHHHHHT-TC-TTTEEEEESCTTTSCCSSSCEEEEEE
T ss_pred hcCCCEEEEecCccHHHHHHHHHCC-CCEEEEEChH-HHHHHHHHHHHHc-CC-CCCEEEEECchhhccCCCCcccEEEE
Confidence 3457799999999999999999885 3589999999 5999999988775 22 35799999999999888789999998
Q ss_pred ccc---cccCCChHHHHHHHHhcccCCcEEEE
Q 018740 255 GAA---IHCWSSPSTGVAEISRVLRPGGVFVG 283 (351)
Q Consensus 255 ~~v---l~h~~d~~~~l~~i~~~LkpgG~li~ 283 (351)
..+ +.+..++..++.++.++|+|||.++.
T Consensus 112 ~~~~~~l~~~~~~~~~l~~~~~~LkpgG~li~ 143 (328)
T 1g6q_1 112 EWMGYFLLYESMMDTVLYARDHYLVEGGLIFP 143 (328)
T ss_dssp CCCBTTBSTTCCHHHHHHHHHHHEEEEEEEES
T ss_pred eCchhhcccHHHHHHHHHHHHhhcCCCeEEEE
Confidence 754 45556788999999999999999974
No 175
>1u2z_A Histone-lysine N-methyltransferase, H3 lysine-79 specific; histone methyltransferase, nucleosome; HET: SAH; 2.20A {Saccharomyces cerevisiae} SCOP: c.66.1.31
Probab=99.53 E-value=4.1e-14 Score=134.84 Aligned_cols=122 Identities=9% Similarity=-0.021 Sum_probs=95.5
Q ss_pred HHHHHHHhccCCCCCCeEEEEcCccCHHHHHHHHhCCCCeEEEEeCCHHHHHHH-------HHHHhhhCCCCCCCeEEEE
Q 018740 164 KEFELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQC-------YEFVQQESNFPKENFLLVR 236 (351)
Q Consensus 164 ~~~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a-------~~~~~~~~g~~~~~i~~~~ 236 (351)
.....+...+...++.+|||||||+|.++..+++..+..+|+|+|+++.+++.| ++++... |....+++++.
T Consensus 229 ~~v~~ml~~l~l~~g~~VLDLGCGsG~la~~LA~~~g~~~V~GVDis~~~l~~A~~Ml~~ar~~~~~~-Gl~~~nV~~i~ 307 (433)
T 1u2z_A 229 NFLSDVYQQCQLKKGDTFMDLGSGVGNCVVQAALECGCALSFGCEIMDDASDLTILQYEELKKRCKLY-GMRLNNVEFSL 307 (433)
T ss_dssp HHHHHHHHHTTCCTTCEEEEESCTTSHHHHHHHHHHCCSEEEEEECCHHHHHHHHHHHHHHHHHHHHT-TBCCCCEEEEE
T ss_pred HHHHHHHHhcCCCCCCEEEEeCCCcCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHhHHHHHHHHHHc-CCCCCceEEEE
Confidence 345566667777788999999999999999999875445899999999999988 7777665 22136899998
Q ss_pred ecCCCC--CC--CCCceeeEEeccccccCCChHHHHHHHHhcccCCcEEEEEeec
Q 018740 237 ADISRL--PF--ASSSIDAVHAGAAIHCWSSPSTGVAEISRVLRPGGVFVGTTYI 287 (351)
Q Consensus 237 ~d~~~l--p~--~~~~fD~V~~~~vl~h~~d~~~~l~~i~~~LkpgG~li~~~~~ 287 (351)
+|.... ++ ..++||+|+++.++ +.+++...|+++.++|||||.+++..+.
T Consensus 308 gD~~~~~~~~~~~~~~FDvIvvn~~l-~~~d~~~~L~el~r~LKpGG~lVi~d~f 361 (433)
T 1u2z_A 308 KKSFVDNNRVAELIPQCDVILVNNFL-FDEDLNKKVEKILQTAKVGCKIISLKSL 361 (433)
T ss_dssp SSCSTTCHHHHHHGGGCSEEEECCTT-CCHHHHHHHHHHHTTCCTTCEEEESSCS
T ss_pred cCccccccccccccCCCCEEEEeCcc-ccccHHHHHHHHHHhCCCCeEEEEeecc
Confidence 865432 22 24689999998776 4467788899999999999999997544
No 176
>2y1w_A Histone-arginine methyltransferase CARM1; histone modification; HET: SFG 849; 2.10A {Homo sapiens} PDB: 2y1x_A* 3b3f_A* 3b3g_A 2v74_B* 2v7e_A
Probab=99.53 E-value=4.9e-14 Score=131.74 Aligned_cols=117 Identities=15% Similarity=0.239 Sum_probs=95.7
Q ss_pred HHHHHhccCCCCCCeEEEEcCccCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHhhhCCCCCCCeEEEEecCCCCCCC
Q 018740 166 FELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLPFA 245 (351)
Q Consensus 166 ~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~g~~~~~i~~~~~d~~~lp~~ 245 (351)
.+.+...+...++.+|||||||+|.++..+++.+ ..+|+|+|+|+ +++.|+++++.. |. ..+++++.+|+.+++++
T Consensus 39 ~~~i~~~l~~~~~~~VLDiGcGtG~ls~~la~~g-~~~V~~vD~s~-~~~~a~~~~~~~-~l-~~~v~~~~~d~~~~~~~ 114 (348)
T 2y1w_A 39 QRAILQNHTDFKDKIVLDVGCGSGILSFFAAQAG-ARKIYAVEAST-MAQHAEVLVKSN-NL-TDRIVVIPGKVEEVSLP 114 (348)
T ss_dssp HHHHHHTGGGTTTCEEEEETCTTSHHHHHHHHTT-CSEEEEEECST-HHHHHHHHHHHT-TC-TTTEEEEESCTTTCCCS
T ss_pred HHHHHhccccCCcCEEEEcCCCccHHHHHHHhCC-CCEEEEECCHH-HHHHHHHHHHHc-CC-CCcEEEEEcchhhCCCC
Confidence 3455566665678899999999999999999875 45999999996 889999888765 21 36899999999998765
Q ss_pred CCceeeEEeccccccCCC--hHHHHHHHHhcccCCcEEEEEeec
Q 018740 246 SSSIDAVHAGAAIHCWSS--PSTGVAEISRVLRPGGVFVGTTYI 287 (351)
Q Consensus 246 ~~~fD~V~~~~vl~h~~d--~~~~l~~i~~~LkpgG~li~~~~~ 287 (351)
++||+|++..+++|+.+ ....+.++.++|||||.+++....
T Consensus 115 -~~~D~Ivs~~~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~~~ 157 (348)
T 2y1w_A 115 -EQVDIIISEPMGYMLFNERMLESYLHAKKYLKPSGNMFPTIGD 157 (348)
T ss_dssp -SCEEEEEECCCBTTBTTTSHHHHHHHGGGGEEEEEEEESCEEE
T ss_pred -CceeEEEEeCchhcCChHHHHHHHHHHHhhcCCCeEEEEecCc
Confidence 67999999999888854 457888999999999999865443
No 177
>2ozv_A Hypothetical protein ATU0636; structural genomics, predicted transferase, predicted O-methyltransferase, PFAM PF05175; HET: MSE; 1.70A {Agrobacterium tumefaciens str}
Probab=99.53 E-value=6e-14 Score=125.80 Aligned_cols=117 Identities=14% Similarity=0.098 Sum_probs=93.5
Q ss_pred HHHhccCCCCCCeEEEEcCccCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHhh---hCCCCCCCeEEEEecCCCC--
Q 018740 168 LMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQ---ESNFPKENFLLVRADISRL-- 242 (351)
Q Consensus 168 ~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~---~~g~~~~~i~~~~~d~~~l-- 242 (351)
.+..++...++.+|||+|||+|.++..++++.+..+|+|+|+++.+++.|++++.. . +. ..++.++++|+.++
T Consensus 27 lL~~~~~~~~~~~VLDlG~G~G~~~l~la~~~~~~~v~gvDi~~~~~~~a~~n~~~~~~~-~l-~~~v~~~~~D~~~~~~ 104 (260)
T 2ozv_A 27 LLASLVADDRACRIADLGAGAGAAGMAVAARLEKAEVTLYERSQEMAEFARRSLELPDNA-AF-SARIEVLEADVTLRAK 104 (260)
T ss_dssp HHHHTCCCCSCEEEEECCSSSSHHHHHHHHHCTTEEEEEEESSHHHHHHHHHHTTSGGGT-TT-GGGEEEEECCTTCCHH
T ss_pred HHHHHhcccCCCEEEEeCChHhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHhhhhC-CC-cceEEEEeCCHHHHhh
Confidence 45556666677899999999999999999998777999999999999999998776 4 11 23699999999887
Q ss_pred -----CCCCCceeeEEecccccc------------------CCChHHHHHHHHhcccCCcEEEEEee
Q 018740 243 -----PFASSSIDAVHAGAAIHC------------------WSSPSTGVAEISRVLRPGGVFVGTTY 286 (351)
Q Consensus 243 -----p~~~~~fD~V~~~~vl~h------------------~~d~~~~l~~i~~~LkpgG~li~~~~ 286 (351)
++++++||+|+++-.+.. ..+...+++.+.++|+|||.+++..+
T Consensus 105 ~~~~~~~~~~~fD~Vv~nPPy~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 171 (260)
T 2ozv_A 105 ARVEAGLPDEHFHHVIMNPPYNDAGDRRTPDALKAEAHAMTEGLFEDWIRTASAIMVSGGQLSLISR 171 (260)
T ss_dssp HHHHTTCCTTCEEEEEECCCC---------------------CCHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred hhhhhccCCCCcCEEEECCCCcCCCCCCCcCHHHHHHhhcCcCCHHHHHHHHHHHcCCCCEEEEEEc
Confidence 256789999999732221 12467889999999999999998644
No 178
>3opn_A Putative hemolysin; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics, nysgxrc; 2.05A {Lactococcus lactis subsp}
Probab=99.53 E-value=3.5e-15 Score=131.56 Aligned_cols=142 Identities=16% Similarity=0.151 Sum_probs=87.1
Q ss_pred CCCCeEEEEcCccCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHhhhCCCCCCCeEEEE-ecCCCCCCCCCceeeEEe
Q 018740 176 VLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVR-ADISRLPFASSSIDAVHA 254 (351)
Q Consensus 176 ~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~g~~~~~i~~~~-~d~~~lp~~~~~fD~V~~ 254 (351)
.++.+|||||||+|.++..+++.+. .+|+|+|+|+.|++.++++..........++.+.. .|+.. ..||.+.+
T Consensus 36 ~~g~~VLDiGcGtG~~t~~la~~g~-~~V~gvDis~~ml~~a~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~d~~~~ 109 (232)
T 3opn_A 36 INGKTCLDIGSSTGGFTDVMLQNGA-KLVYALDVGTNQLAWKIRSDERVVVMEQFNFRNAVLADFEQ-----GRPSFTSI 109 (232)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHTTC-SEEEEECSSCCCCCHHHHTCTTEEEECSCCGGGCCGGGCCS-----CCCSEEEE
T ss_pred CCCCEEEEEccCCCHHHHHHHhcCC-CEEEEEcCCHHHHHHHHHhCccccccccceEEEeCHhHcCc-----CCCCEEEE
Confidence 3467999999999999999999863 49999999999999987742211000001121111 12221 12344444
Q ss_pred ccccccCCChHHHHHHHHhcccCCcEEEEEeeccCCCCCcchHHHHHHHHHhh--c--cCCccCCCHHHHHHHHHHCCCe
Q 018740 255 GAAIHCWSSPSTGVAEISRVLRPGGVFVGTTYIVDGPFNLIPFSRLLRQNMMQ--I--SGSYTFLSEREIEDLCRACGLV 330 (351)
Q Consensus 255 ~~vl~h~~d~~~~l~~i~~~LkpgG~li~~~~~~~~~~~~~~~~~~~~~~~~~--~--~~~~~~~s~~~l~~ll~~aGf~ 330 (351)
..++.++ ..++++++++|||||.+++... +.....+..... . ..+.+..+.+++.++++++||+
T Consensus 110 D~v~~~l---~~~l~~i~rvLkpgG~lv~~~~---------p~~e~~~~~~~~~G~~~d~~~~~~~~~~l~~~l~~aGf~ 177 (232)
T 3opn_A 110 DVSFISL---DLILPPLYEILEKNGEVAALIK---------PQFEAGREQVGKNGIIRDPKVHQMTIEKVLKTATQLGFS 177 (232)
T ss_dssp CCSSSCG---GGTHHHHHHHSCTTCEEEEEEC---------HHHHSCHHHHC-CCCCCCHHHHHHHHHHHHHHHHHHTEE
T ss_pred EEEhhhH---HHHHHHHHHhccCCCEEEEEEC---------cccccCHHHhCcCCeecCcchhHHHHHHHHHHHHHCCCE
Confidence 4443333 6789999999999999998541 111111111100 0 0112234788999999999999
Q ss_pred EEEEE
Q 018740 331 DFKCT 335 (351)
Q Consensus 331 ~v~~~ 335 (351)
++...
T Consensus 178 v~~~~ 182 (232)
T 3opn_A 178 VKGLT 182 (232)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 88754
No 179
>3hp7_A Hemolysin, putative; structural genomics, APC64019, PSI-2, protein STR initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.53A {Streptococcus thermophilus}
Probab=99.53 E-value=2.1e-14 Score=129.92 Aligned_cols=143 Identities=13% Similarity=0.102 Sum_probs=95.3
Q ss_pred CCCCeEEEEcCccCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHhhhCCCCCCCeEEE-EecCCCCC---CCCCceee
Q 018740 176 VLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLV-RADISRLP---FASSSIDA 251 (351)
Q Consensus 176 ~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~g~~~~~i~~~-~~d~~~lp---~~~~~fD~ 251 (351)
.++.+|||||||||.++..+++.+ ..+|+|+|+|+.|++.+.+. .+++... ..++..++ ++..+||+
T Consensus 84 ~~g~~vLDiGcGTG~~t~~L~~~g-a~~V~aVDvs~~mL~~a~r~--------~~rv~~~~~~ni~~l~~~~l~~~~fD~ 154 (291)
T 3hp7_A 84 VEDMITIDIGASTGGFTDVMLQNG-AKLVYAVDVGTNQLVWKLRQ--------DDRVRSMEQYNFRYAEPVDFTEGLPSF 154 (291)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHTT-CSEEEEECSSSSCSCHHHHT--------CTTEEEECSCCGGGCCGGGCTTCCCSE
T ss_pred ccccEEEecCCCccHHHHHHHhCC-CCEEEEEECCHHHHHHHHHh--------CcccceecccCceecchhhCCCCCCCE
Confidence 356799999999999999998885 35899999999999986542 2444332 23443333 23456999
Q ss_pred EEeccccccCCChHHHHHHHHhcccCCcEEEEEe-eccCCCCCcchHHHHHHHHHhhccCCccCCCHHHHHHHHHHCCCe
Q 018740 252 VHAGAAIHCWSSPSTGVAEISRVLRPGGVFVGTT-YIVDGPFNLIPFSRLLRQNMMQISGSYTFLSEREIEDLCRACGLV 330 (351)
Q Consensus 252 V~~~~vl~h~~d~~~~l~~i~~~LkpgG~li~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~~ll~~aGf~ 330 (351)
|++..+++++ ..+|.++.++|+|||.+++.. |..+.. ...... ..... ....+....+++.++++++||.
T Consensus 155 v~~d~sf~sl---~~vL~e~~rvLkpGG~lv~lvkPqfe~~---~~~~~~--~G~vr-d~~~~~~~~~~v~~~~~~~Gf~ 225 (291)
T 3hp7_A 155 ASIDVSFISL---NLILPALAKILVDGGQVVALVKPQFEAG---REQIGK--NGIVR-ESSIHEKVLETVTAFAVDYGFS 225 (291)
T ss_dssp EEECCSSSCG---GGTHHHHHHHSCTTCEEEEEECGGGTSC---GGGCC---CCCCC-CHHHHHHHHHHHHHHHHHTTEE
T ss_pred EEEEeeHhhH---HHHHHHHHHHcCcCCEEEEEECcccccC---hhhcCC--CCccC-CHHHHHHHHHHHHHHHHHCCCE
Confidence 9998887754 778999999999999998863 111100 000000 00000 0012234678899999999999
Q ss_pred EEEEEe
Q 018740 331 DFKCTR 336 (351)
Q Consensus 331 ~v~~~~ 336 (351)
+.....
T Consensus 226 v~~~~~ 231 (291)
T 3hp7_A 226 VKGLDF 231 (291)
T ss_dssp EEEEEE
T ss_pred EEEEEE
Confidence 877554
No 180
>3tma_A Methyltransferase; thump domain; 2.05A {Thermus thermophilus}
Probab=99.53 E-value=1.3e-13 Score=129.20 Aligned_cols=123 Identities=20% Similarity=0.091 Sum_probs=100.8
Q ss_pred cHHHHHHHHhccCCCCCCeEEEEcCccCHHHHHHHHhC-CCCeEEEEeCCHHHHHHHHHHHhhhCCCCCCCeEEEEecCC
Q 018740 162 PEKEFELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSG-LFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADIS 240 (351)
Q Consensus 162 ~~~~~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~-~~~~v~gvD~s~~~~~~a~~~~~~~~g~~~~~i~~~~~d~~ 240 (351)
.+.+...+.......++.+|||+|||+|.++..++..+ +..+++|+|+|+.+++.|++++... |. .++.+.++|+.
T Consensus 188 ~~~la~~l~~~~~~~~~~~vLD~gcGsG~~~ie~a~~~~~~~~v~g~Di~~~~i~~a~~n~~~~-g~--~~i~~~~~D~~ 264 (354)
T 3tma_A 188 TPVLAQALLRLADARPGMRVLDPFTGSGTIALEAASTLGPTSPVYAGDLDEKRLGLAREAALAS-GL--SWIRFLRADAR 264 (354)
T ss_dssp CHHHHHHHHHHTTCCTTCCEEESSCTTSHHHHHHHHHHCTTSCEEEEESCHHHHHHHHHHHHHT-TC--TTCEEEECCGG
T ss_pred CHHHHHHHHHHhCCCCCCEEEeCCCCcCHHHHHHHHhhCCCceEEEEECCHHHHHHHHHHHHHc-CC--CceEEEeCChh
Confidence 35556667777777778899999999999999999976 5679999999999999999998887 32 38999999999
Q ss_pred CCCCCCCceeeEEeccccccCC--------ChHHHHHHHHhcccCCcEEEEEeec
Q 018740 241 RLPFASSSIDAVHAGAAIHCWS--------SPSTGVAEISRVLRPGGVFVGTTYI 287 (351)
Q Consensus 241 ~lp~~~~~fD~V~~~~vl~h~~--------d~~~~l~~i~~~LkpgG~li~~~~~ 287 (351)
+++.+.+.||+|+++-...... ....+++++.++|+|||.+++.++.
T Consensus 265 ~~~~~~~~~D~Ii~npPyg~r~~~~~~~~~~~~~~~~~~~~~LkpgG~l~i~t~~ 319 (354)
T 3tma_A 265 HLPRFFPEVDRILANPPHGLRLGRKEGLFHLYWDFLRGALALLPPGGRVALLTLR 319 (354)
T ss_dssp GGGGTCCCCSEEEECCCSCC----CHHHHHHHHHHHHHHHHTSCTTCEEEEEESC
T ss_pred hCccccCCCCEEEECCCCcCccCCcccHHHHHHHHHHHHHHhcCCCcEEEEEeCC
Confidence 9887778899999965443211 1257899999999999999997663
No 181
>1i1n_A Protein-L-isoaspartate O-methyltransferase; S-adenosyl homocysteine, protein repair; HET: SAH; 1.50A {Homo sapiens} SCOP: c.66.1.7 PDB: 1kr5_A*
Probab=99.52 E-value=1.1e-13 Score=121.18 Aligned_cols=106 Identities=23% Similarity=0.306 Sum_probs=88.7
Q ss_pred CCCCCeEEEEcCccCHHHHHHHHh-CCCCeEEEEeCCHHHHHHHHHHHhhhCCC---CCCCeEEEEecCCCCCCCCCcee
Q 018740 175 PVLGGNIIDASCGSGLFSRIFAKS-GLFSLVVALDYSENMLKQCYEFVQQESNF---PKENFLLVRADISRLPFASSSID 250 (351)
Q Consensus 175 ~~~~~~vLDiGcG~G~~~~~l~~~-~~~~~v~gvD~s~~~~~~a~~~~~~~~g~---~~~~i~~~~~d~~~lp~~~~~fD 250 (351)
..++.+|||+|||+|.++..+++. ++..+|+|+|+++.+++.+++++... +. ...++.++.+|+...+..+++||
T Consensus 75 ~~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~-~~~~~~~~~v~~~~~d~~~~~~~~~~fD 153 (226)
T 1i1n_A 75 LHEGAKALDVGSGSGILTACFARMVGCTGKVIGIDHIKELVDDSVNNVRKD-DPTLLSSGRVQLVVGDGRMGYAEEAPYD 153 (226)
T ss_dssp SCTTCEEEEETCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHH-CTHHHHTSSEEEEESCGGGCCGGGCCEE
T ss_pred CCCCCEEEEEcCCcCHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHhh-cccccCCCcEEEEECCcccCcccCCCcC
Confidence 456789999999999999999887 44469999999999999999988764 10 02589999999987665567899
Q ss_pred eEEeccccccCCChHHHHHHHHhcccCCcEEEEEeec
Q 018740 251 AVHAGAAIHCWSSPSTGVAEISRVLRPGGVFVGTTYI 287 (351)
Q Consensus 251 ~V~~~~vl~h~~d~~~~l~~i~~~LkpgG~li~~~~~ 287 (351)
+|++...++++ ++++.++|||||++++....
T Consensus 154 ~i~~~~~~~~~------~~~~~~~LkpgG~lv~~~~~ 184 (226)
T 1i1n_A 154 AIHVGAAAPVV------PQALIDQLKPGGRLILPVGP 184 (226)
T ss_dssp EEEECSBBSSC------CHHHHHTEEEEEEEEEEESC
T ss_pred EEEECCchHHH------HHHHHHhcCCCcEEEEEEec
Confidence 99999998887 46889999999999998764
No 182
>3dr5_A Putative O-methyltransferase; Q8NRD3, CGL1119, PF01596, CGR117, NESG, structural genomics, PSI-2, protein structure initiative; 2.25A {Corynebacterium glutamicum}
Probab=99.52 E-value=5.8e-14 Score=122.83 Aligned_cols=118 Identities=12% Similarity=0.094 Sum_probs=91.9
Q ss_pred HHHHHhccCCCCCCeEEEEcCccCHHHHHHHHhC-CCCeEEEEeCCHHHHHHHHHHHhhhCCCCCCCeEEEEecCCCC-C
Q 018740 166 FELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSG-LFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRL-P 243 (351)
Q Consensus 166 ~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~-~~~~v~gvD~s~~~~~~a~~~~~~~~g~~~~~i~~~~~d~~~l-p 243 (351)
+..+....+..++.+|||||||+|..+..+++.. +..+|+++|+++.+++.|++++... |....+++++.+|+.+. +
T Consensus 45 l~~l~~~~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~-g~~~~~i~~~~gda~~~l~ 123 (221)
T 3dr5_A 45 LTTLAATTNGNGSTGAIAITPAAGLVGLYILNGLADNTTLTCIDPESEHQRQAKALFREA-GYSPSRVRFLLSRPLDVMS 123 (221)
T ss_dssp HHHHHHHSCCTTCCEEEEESTTHHHHHHHHHHHSCTTSEEEEECSCHHHHHHHHHHHHHT-TCCGGGEEEECSCHHHHGG
T ss_pred HHHHHHhhCCCCCCCEEEEcCCchHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHc-CCCcCcEEEEEcCHHHHHH
Confidence 3444444444445599999999999999999874 3679999999999999999999876 33115899999998664 2
Q ss_pred -CCCCceeeEEeccccccCCChHHHHHHHHhcccCCcEEEEEeec
Q 018740 244 -FASSSIDAVHAGAAIHCWSSPSTGVAEISRVLRPGGVFVGTTYI 287 (351)
Q Consensus 244 -~~~~~fD~V~~~~vl~h~~d~~~~l~~i~~~LkpgG~li~~~~~ 287 (351)
+++++||+|++... ..+...+++++.++|+|||++++....
T Consensus 124 ~~~~~~fD~V~~d~~---~~~~~~~l~~~~~~LkpGG~lv~dn~~ 165 (221)
T 3dr5_A 124 RLANDSYQLVFGQVS---PMDLKALVDAAWPLLRRGGALVLADAL 165 (221)
T ss_dssp GSCTTCEEEEEECCC---TTTHHHHHHHHHHHEEEEEEEEETTTT
T ss_pred HhcCCCcCeEEEcCc---HHHHHHHHHHHHHHcCCCcEEEEeCCC
Confidence 33689999998654 245667899999999999999985443
No 183
>2pbf_A Protein-L-isoaspartate O-methyltransferase beta-A methyltransferase; protein repair, isoaspartyl formation, P. falciparum; HET: SAH; 2.00A {Plasmodium falciparum}
Probab=99.51 E-value=1.1e-13 Score=121.27 Aligned_cols=106 Identities=20% Similarity=0.263 Sum_probs=89.3
Q ss_pred CCCCCeEEEEcCccCHHHHHHHHhC-----CCCeEEEEeCCHHHHHHHHHHHhhhCCC---CCCCeEEEEecCCCCC---
Q 018740 175 PVLGGNIIDASCGSGLFSRIFAKSG-----LFSLVVALDYSENMLKQCYEFVQQESNF---PKENFLLVRADISRLP--- 243 (351)
Q Consensus 175 ~~~~~~vLDiGcG~G~~~~~l~~~~-----~~~~v~gvD~s~~~~~~a~~~~~~~~g~---~~~~i~~~~~d~~~lp--- 243 (351)
..++.+|||||||+|.++..+++.. +..+|+|+|+++.+++.|++++... +. ...++.++.+|+....
T Consensus 78 ~~~~~~VLdiG~G~G~~~~~la~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~-~~~~~~~~~v~~~~~d~~~~~~~~ 156 (227)
T 2pbf_A 78 LKPGSRAIDVGSGSGYLTVCMAIKMNVLENKNSYVIGLERVKDLVNFSLENIKRD-KPELLKIDNFKIIHKNIYQVNEEE 156 (227)
T ss_dssp SCTTCEEEEESCTTSHHHHHHHHHTTTTTCTTCEEEEEESCHHHHHHHHHHHHHH-CGGGGSSTTEEEEECCGGGCCHHH
T ss_pred CCCCCEEEEECCCCCHHHHHHHHHhcccCCCCCEEEEEeCCHHHHHHHHHHHHHc-CccccccCCEEEEECChHhccccc
Confidence 4567899999999999999999875 4569999999999999999998776 10 0358999999998754
Q ss_pred -CCCCceeeEEeccccccCCChHHHHHHHHhcccCCcEEEEEeec
Q 018740 244 -FASSSIDAVHAGAAIHCWSSPSTGVAEISRVLRPGGVFVGTTYI 287 (351)
Q Consensus 244 -~~~~~fD~V~~~~vl~h~~d~~~~l~~i~~~LkpgG~li~~~~~ 287 (351)
...++||+|++...++|+ ++++.++|+|||++++..+.
T Consensus 157 ~~~~~~fD~I~~~~~~~~~------~~~~~~~LkpgG~lv~~~~~ 195 (227)
T 2pbf_A 157 KKELGLFDAIHVGASASEL------PEILVDLLAENGKLIIPIEE 195 (227)
T ss_dssp HHHHCCEEEEEECSBBSSC------CHHHHHHEEEEEEEEEEEEE
T ss_pred CccCCCcCEEEECCchHHH------HHHHHHhcCCCcEEEEEEcc
Confidence 456789999999999886 47889999999999998764
No 184
>2gpy_A O-methyltransferase; structural genomics, PSI, protein structure initiative, NEW research center for structural genomics, nysgxrc; HET: MSE; 1.90A {Bacillus halodurans}
Probab=99.51 E-value=9e-14 Score=122.37 Aligned_cols=119 Identities=17% Similarity=0.176 Sum_probs=96.1
Q ss_pred HHHHHHHhccCCCCCCeEEEEcCccCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHhhhCCCCCCCeEEEEecCCCC-
Q 018740 164 KEFELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRL- 242 (351)
Q Consensus 164 ~~~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~g~~~~~i~~~~~d~~~l- 242 (351)
.....+...+...++.+|||+|||+|..+..+++..+..+|+++|+++.+++.|++++... |. ..++.++.+|+...
T Consensus 41 ~~~~~l~~~~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~v~~vD~~~~~~~~a~~~~~~~-~~-~~~v~~~~~d~~~~~ 118 (233)
T 2gpy_A 41 LGMESLLHLLKMAAPARILEIGTAIGYSAIRMAQALPEATIVSIERDERRYEEAHKHVKAL-GL-ESRIELLFGDALQLG 118 (233)
T ss_dssp HHHHHHHHHHHHHCCSEEEEECCTTSHHHHHHHHHCTTCEEEEECCCHHHHHHHHHHHHHT-TC-TTTEEEECSCGGGSH
T ss_pred HHHHHHHHHHhccCCCEEEEecCCCcHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHc-CC-CCcEEEEECCHHHHH
Confidence 3344455555555678999999999999999999876679999999999999999998775 21 25799999999774
Q ss_pred CCC--CCceeeEEeccccccCCChHHHHHHHHhcccCCcEEEEEeec
Q 018740 243 PFA--SSSIDAVHAGAAIHCWSSPSTGVAEISRVLRPGGVFVGTTYI 287 (351)
Q Consensus 243 p~~--~~~fD~V~~~~vl~h~~d~~~~l~~i~~~LkpgG~li~~~~~ 287 (351)
+.. +++||+|++....+ +...+++++.++|+|||++++.+..
T Consensus 119 ~~~~~~~~fD~I~~~~~~~---~~~~~l~~~~~~L~pgG~lv~~~~~ 162 (233)
T 2gpy_A 119 EKLELYPLFDVLFIDAAKG---QYRRFFDMYSPMVRPGGLILSDNVL 162 (233)
T ss_dssp HHHTTSCCEEEEEEEGGGS---CHHHHHHHHGGGEEEEEEEEEETTT
T ss_pred HhcccCCCccEEEECCCHH---HHHHHHHHHHHHcCCCeEEEEEcCC
Confidence 432 57899999977753 7789999999999999999997544
No 185
>2yvl_A TRMI protein, hypothetical protein; tRNA, methyltransferase, S-adenosylmethionine, structural GE NPPSFA; HET: SAM; 2.20A {Aquifex aeolicus}
Probab=99.50 E-value=3.3e-13 Score=119.60 Aligned_cols=114 Identities=12% Similarity=0.101 Sum_probs=95.9
Q ss_pred HHHHHHhccCCCCCCeEEEEcCccCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHhhhCCCCCCCeEEEEecCCCCCC
Q 018740 165 EFELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLPF 244 (351)
Q Consensus 165 ~~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~g~~~~~i~~~~~d~~~lp~ 244 (351)
....+...+...++.+|||+|||+|.++..+++.+ .+++++|+++.+++.|++++... +. ..++.+..+|+.+...
T Consensus 79 ~~~~~~~~~~~~~~~~vldiG~G~G~~~~~l~~~~--~~v~~vD~~~~~~~~a~~~~~~~-~~-~~~~~~~~~d~~~~~~ 154 (248)
T 2yvl_A 79 DSFYIALKLNLNKEKRVLEFGTGSGALLAVLSEVA--GEVWTFEAVEEFYKTAQKNLKKF-NL-GKNVKFFNVDFKDAEV 154 (248)
T ss_dssp HHHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHHS--SEEEEECSCHHHHHHHHHHHHHT-TC-CTTEEEECSCTTTSCC
T ss_pred hHHHHHHhcCCCCCCEEEEeCCCccHHHHHHHHhC--CEEEEEecCHHHHHHHHHHHHHc-CC-CCcEEEEEcChhhccc
Confidence 34466677777778899999999999999999884 49999999999999999988765 21 2689999999987543
Q ss_pred CCCceeeEEeccccccCCChHHHHHHHHhcccCCcEEEEEeec
Q 018740 245 ASSSIDAVHAGAAIHCWSSPSTGVAEISRVLRPGGVFVGTTYI 287 (351)
Q Consensus 245 ~~~~fD~V~~~~vl~h~~d~~~~l~~i~~~LkpgG~li~~~~~ 287 (351)
++++||+|++ +.+++..+++++.++|+|||.+++..+.
T Consensus 155 ~~~~~D~v~~-----~~~~~~~~l~~~~~~L~~gG~l~~~~~~ 192 (248)
T 2yvl_A 155 PEGIFHAAFV-----DVREPWHYLEKVHKSLMEGAPVGFLLPT 192 (248)
T ss_dssp CTTCBSEEEE-----CSSCGGGGHHHHHHHBCTTCEEEEEESS
T ss_pred CCCcccEEEE-----CCcCHHHHHHHHHHHcCCCCEEEEEeCC
Confidence 5678999997 4668889999999999999999998775
No 186
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=99.49 E-value=2.4e-14 Score=142.39 Aligned_cols=106 Identities=18% Similarity=0.262 Sum_probs=91.0
Q ss_pred CCeEEEEcCccCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHhhhCCCCCCCeEEEEecCCCC--CCCCCceeeEEec
Q 018740 178 GGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRL--PFASSSIDAVHAG 255 (351)
Q Consensus 178 ~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~g~~~~~i~~~~~d~~~l--p~~~~~fD~V~~~ 255 (351)
+.+|||||||.|.++..+++.|. +|+|+|+|+.+++.|+.++.+. +..++++.+++++++ ++.+++||+|+|+
T Consensus 67 ~~~vLDvGCG~G~~~~~la~~ga--~V~giD~~~~~i~~a~~~a~~~---~~~~~~~~~~~~~~~~~~~~~~~fD~v~~~ 141 (569)
T 4azs_A 67 PLNVLDLGCAQGFFSLSLASKGA--TIVGIDFQQENINVCRALAEEN---PDFAAEFRVGRIEEVIAALEEGEFDLAIGL 141 (569)
T ss_dssp CCEEEEETCTTSHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHHTS---TTSEEEEEECCHHHHHHHCCTTSCSEEEEE
T ss_pred CCeEEEECCCCcHHHHHHHhCCC--EEEEECCCHHHHHHHHHHHHhc---CCCceEEEECCHHHHhhhccCCCccEEEEC
Confidence 57999999999999999999987 9999999999999999988765 135899999999887 4567899999999
Q ss_pred cccccCCChH--HHHHHHHhcccCCcEEEEEeecc
Q 018740 256 AAIHCWSSPS--TGVAEISRVLRPGGVFVGTTYIV 288 (351)
Q Consensus 256 ~vl~h~~d~~--~~l~~i~~~LkpgG~li~~~~~~ 288 (351)
.+|||++|+. ..+..+.+.|+++|..++.....
T Consensus 142 e~~ehv~~~~~~~~~~~~~~tl~~~~~~~~~~~~~ 176 (569)
T 4azs_A 142 SVFHHIVHLHGIDEVKRLLSRLADVTQAVILELAV 176 (569)
T ss_dssp SCHHHHHHHHCHHHHHHHHHHHHHHSSEEEEECCC
T ss_pred cchhcCCCHHHHHHHHHHHHHhccccceeeEEecc
Confidence 9999999886 33567788899988877766543
No 187
>2igt_A SAM dependent methyltransferase; alpha-beta sandwich, beta-barrel, structural genomics, PSI-2 structure initiative; HET: MSE SAM GOL; 1.89A {Agrobacterium tumefaciens str} SCOP: c.66.1.51
Probab=99.49 E-value=1.1e-13 Score=128.21 Aligned_cols=118 Identities=14% Similarity=0.084 Sum_probs=90.7
Q ss_pred HHHHhccC-CCCCCeEEEEcCccCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHhhhCCCCCCCeEEEEecCCCCCCC
Q 018740 167 ELMKGYLK-PVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLPFA 245 (351)
Q Consensus 167 ~~l~~~l~-~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~g~~~~~i~~~~~d~~~lp~~ 245 (351)
+.+...+. ..++.+|||+|||+|.++..+++.+. +|+++|+|+.+++.|++++... +....++.++++|+.++...
T Consensus 142 ~~l~~~~~~~~~~~~VLDlgcGtG~~sl~la~~ga--~V~~VD~s~~al~~a~~n~~~~-gl~~~~v~~i~~D~~~~l~~ 218 (332)
T 2igt_A 142 EWLKNAVETADRPLKVLNLFGYTGVASLVAAAAGA--EVTHVDASKKAIGWAKENQVLA-GLEQAPIRWICEDAMKFIQR 218 (332)
T ss_dssp HHHHHHHHHSSSCCEEEEETCTTCHHHHHHHHTTC--EEEEECSCHHHHHHHHHHHHHH-TCTTSCEEEECSCHHHHHHH
T ss_pred HHHHHHHHhcCCCCcEEEcccccCHHHHHHHHcCC--EEEEEECCHHHHHHHHHHHHHc-CCCccceEEEECcHHHHHHH
Confidence 34444443 33467999999999999999999876 9999999999999999998876 32122599999998765321
Q ss_pred ----CCceeeEEecc----------ccccCCChHHHHHHHHhcccCCcEEEEEeec
Q 018740 246 ----SSSIDAVHAGA----------AIHCWSSPSTGVAEISRVLRPGGVFVGTTYI 287 (351)
Q Consensus 246 ----~~~fD~V~~~~----------vl~h~~d~~~~l~~i~~~LkpgG~li~~~~~ 287 (351)
.++||+|++.- ++++..+...+++++.++|+|||++++....
T Consensus 219 ~~~~~~~fD~Ii~dPP~~~~~~~~~~~~~~~~~~~ll~~~~~~LkpgG~lli~~~~ 274 (332)
T 2igt_A 219 EERRGSTYDIILTDPPKFGRGTHGEVWQLFDHLPLMLDICREILSPKALGLVLTAY 274 (332)
T ss_dssp HHHHTCCBSEEEECCCSEEECTTCCEEEHHHHHHHHHHHHHHTBCTTCCEEEEEEC
T ss_pred HHhcCCCceEEEECCccccCCchHHHHHHHHHHHHHHHHHHHhcCcCcEEEEEECC
Confidence 56899999842 2233445678999999999999998877654
No 188
>3a27_A TYW2, uncharacterized protein MJ1557; wybutosine modification, transferase; HET: SAM; 2.00A {Methanocaldococcus jannaschii}
Probab=99.48 E-value=2.7e-13 Score=122.35 Aligned_cols=106 Identities=18% Similarity=0.168 Sum_probs=91.1
Q ss_pred CCCCCeEEEEcCccCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHhhhCCCCCCCeEEEEecCCCCCCCCCceeeEEe
Q 018740 175 PVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLPFASSSIDAVHA 254 (351)
Q Consensus 175 ~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~g~~~~~i~~~~~d~~~lp~~~~~fD~V~~ 254 (351)
..++.+|||+|||+|.++..+++.++..+|+|+|+++.+++.|++++..+ + ..++.++.+|+.+.+. .++||+|++
T Consensus 117 ~~~~~~VLDlgcG~G~~s~~la~~~~~~~V~~vD~s~~av~~a~~n~~~n-~--l~~~~~~~~d~~~~~~-~~~~D~Vi~ 192 (272)
T 3a27_A 117 SNENEVVVDMFAGIGYFTIPLAKYSKPKLVYAIEKNPTAYHYLCENIKLN-K--LNNVIPILADNRDVEL-KDVADRVIM 192 (272)
T ss_dssp CCTTCEEEETTCTTTTTHHHHHHHTCCSEEEEEECCHHHHHHHHHHHHHT-T--CSSEEEEESCGGGCCC-TTCEEEEEE
T ss_pred cCCCCEEEEecCcCCHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHc-C--CCCEEEEECChHHcCc-cCCceEEEE
Confidence 44578999999999999999999866679999999999999999998876 2 3679999999988743 678999998
Q ss_pred ccccccCCChHHHHHHHHhcccCCcEEEEEeecc
Q 018740 255 GAAIHCWSSPSTGVAEISRVLRPGGVFVGTTYIV 288 (351)
Q Consensus 255 ~~vl~h~~d~~~~l~~i~~~LkpgG~li~~~~~~ 288 (351)
.... +...++.++.+.|+|||++++++...
T Consensus 193 d~p~----~~~~~l~~~~~~LkpgG~l~~s~~~~ 222 (272)
T 3a27_A 193 GYVH----KTHKFLDKTFEFLKDRGVIHYHETVA 222 (272)
T ss_dssp CCCS----SGGGGHHHHHHHEEEEEEEEEEEEEE
T ss_pred CCcc----cHHHHHHHHHHHcCCCCEEEEEEcCc
Confidence 7653 66788999999999999999988764
No 189
>3tm4_A TRNA (guanine N2-)-methyltransferase TRM14; rossmann fold, thump domain, tRNA methyltransferase; HET: SAM; 1.95A {Pyrococcus furiosus} PDB: 3tlj_A* 3tm5_A*
Probab=99.48 E-value=1.3e-12 Score=123.12 Aligned_cols=138 Identities=16% Similarity=0.138 Sum_probs=106.5
Q ss_pred cHHHHHHHHhccCCCCCCeEEEEcCccCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHhhhCCCCCCCeEEEEecCCC
Q 018740 162 PEKEFELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISR 241 (351)
Q Consensus 162 ~~~~~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~g~~~~~i~~~~~d~~~ 241 (351)
.......+.... ..++.+|||+|||+|.++..++..++..+|+|+|+|+.|++.|++++... |. ..++.+.++|+.+
T Consensus 203 ~~~la~~l~~~~-~~~~~~vLD~gCGsG~~~i~~a~~~~~~~v~g~Dis~~~l~~A~~n~~~~-gl-~~~i~~~~~D~~~ 279 (373)
T 3tm4_A 203 KASIANAMIELA-ELDGGSVLDPMCGSGTILIELALRRYSGEIIGIEKYRKHLIGAEMNALAA-GV-LDKIKFIQGDATQ 279 (373)
T ss_dssp CHHHHHHHHHHH-TCCSCCEEETTCTTCHHHHHHHHTTCCSCEEEEESCHHHHHHHHHHHHHT-TC-GGGCEEEECCGGG
T ss_pred cHHHHHHHHHhh-cCCCCEEEEccCcCcHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHHc-CC-CCceEEEECChhh
Confidence 344555555555 66788999999999999999999886668999999999999999998876 21 2589999999999
Q ss_pred CCCCCCceeeEEeccccccC-------CCh-HHHHHHHHhcccCCcEEEEEeeccCCCCCcchHHHHHHHHHhhccCCcc
Q 018740 242 LPFASSSIDAVHAGAAIHCW-------SSP-STGVAEISRVLRPGGVFVGTTYIVDGPFNLIPFSRLLRQNMMQISGSYT 313 (351)
Q Consensus 242 lp~~~~~fD~V~~~~vl~h~-------~d~-~~~l~~i~~~LkpgG~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 313 (351)
+++++++||+|+++-.+..- .+. ..+++++.++| +|.+++.+.
T Consensus 280 ~~~~~~~fD~Ii~npPyg~r~~~~~~~~~ly~~~~~~l~r~l--~g~~~~i~~--------------------------- 330 (373)
T 3tm4_A 280 LSQYVDSVDFAISNLPYGLKIGKKSMIPDLYMKFFNELAKVL--EKRGVFITT--------------------------- 330 (373)
T ss_dssp GGGTCSCEEEEEEECCCC------CCHHHHHHHHHHHHHHHE--EEEEEEEES---------------------------
T ss_pred CCcccCCcCEEEECCCCCcccCcchhHHHHHHHHHHHHHHHc--CCeEEEEEC---------------------------
Confidence 99888899999997553321 111 56788899988 555554332
Q ss_pred CCCHHHHHHHHHHCCCeEEE
Q 018740 314 FLSEREIEDLCRACGLVDFK 333 (351)
Q Consensus 314 ~~s~~~l~~ll~~aGf~~v~ 333 (351)
+.+.+.+.+++.||+..+
T Consensus 331 --~~~~~~~~~~~~G~~~~~ 348 (373)
T 3tm4_A 331 --EKKAIEEAIAENGFEIIH 348 (373)
T ss_dssp --CHHHHHHHHHHTTEEEEE
T ss_pred --CHHHHHHHHHHcCCEEEE
Confidence 345777889999998877
No 190
>3r3h_A O-methyltransferase, SAM-dependent; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.65A {Legionella pneumophila subsp}
Probab=99.47 E-value=8.1e-14 Score=123.63 Aligned_cols=117 Identities=10% Similarity=0.064 Sum_probs=91.9
Q ss_pred HHHhccCCCCCCeEEEEcCccCHHHHHHHHhCC-CCeEEEEeCCHHHHHHHHHHHhhhCCCCCCCeEEEEecCCCC-CCC
Q 018740 168 LMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGL-FSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRL-PFA 245 (351)
Q Consensus 168 ~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~-~~~v~gvD~s~~~~~~a~~~~~~~~g~~~~~i~~~~~d~~~l-p~~ 245 (351)
.+...+...++.+|||||||+|..+..+++..+ ..+|+++|+++.+++.|++++... |. ..+++++.+|+.+. +..
T Consensus 51 ~l~~l~~~~~~~~VLDiG~G~G~~t~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~-g~-~~~i~~~~gda~~~l~~~ 128 (242)
T 3r3h_A 51 FMQMLIRLTRAKKVLELGTFTGYSALAMSLALPDDGQVITCDINEGWTKHAHPYWREA-KQ-EHKIKLRLGPALDTLHSL 128 (242)
T ss_dssp HHHHHHHHHTCSEEEEEESCCSHHHHHHHHTSCTTCEEEEEECCCSSCCCSHHHHHHT-TC-TTTEEEEESCHHHHHHHH
T ss_pred HHHHHHhhcCcCEEEEeeCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHc-CC-CCcEEEEEcCHHHHHHHH
Confidence 333333334467999999999999999998754 679999999999999999998876 22 35899999998664 211
Q ss_pred -----CCceeeEEeccccccCCChHHHHHHHHhcccCCcEEEEEeeccC
Q 018740 246 -----SSSIDAVHAGAAIHCWSSPSTGVAEISRVLRPGGVFVGTTYIVD 289 (351)
Q Consensus 246 -----~~~fD~V~~~~vl~h~~d~~~~l~~i~~~LkpgG~li~~~~~~~ 289 (351)
+++||+|++... ..+...+++++.++|+|||++++......
T Consensus 129 ~~~~~~~~fD~V~~d~~---~~~~~~~l~~~~~~LkpGG~lv~d~~~~~ 174 (242)
T 3r3h_A 129 LNEGGEHQFDFIFIDAD---KTNYLNYYELALKLVTPKGLIAIDNIFWD 174 (242)
T ss_dssp HHHHCSSCEEEEEEESC---GGGHHHHHHHHHHHEEEEEEEEEECSSSS
T ss_pred hhccCCCCEeEEEEcCC---hHHhHHHHHHHHHhcCCCeEEEEECCccC
Confidence 478999998654 23566889999999999999999766543
No 191
>1o9g_A RRNA methyltransferase; antibiotic resistance, Se-MAD; 1.5A {Streptomyces viridochromogenes} SCOP: c.66.1.29 PDB: 1o9h_A
Probab=99.47 E-value=1.5e-13 Score=122.26 Aligned_cols=120 Identities=18% Similarity=0.122 Sum_probs=88.5
Q ss_pred HHHHHhccCCCCCCeEEEEcCccCHHHHHHHHh--CCCCeEEEEeCCHHHHHHHHHHHhhhC--CCCCCC----------
Q 018740 166 FELMKGYLKPVLGGNIIDASCGSGLFSRIFAKS--GLFSLVVALDYSENMLKQCYEFVQQES--NFPKEN---------- 231 (351)
Q Consensus 166 ~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~--~~~~~v~gvD~s~~~~~~a~~~~~~~~--g~~~~~---------- 231 (351)
.+.+...+...++.+|||+|||+|.++..+++. .+..+|+|+|+|+.+++.|++++.... +. ..+
T Consensus 40 ~~~~l~~~~~~~~~~vLD~gcGsG~~~~~la~~~~~~~~~v~gvDis~~~l~~A~~~~~~~~~~~~-~~~~~~~~~~~~~ 118 (250)
T 1o9g_A 40 FQRALARLPGDGPVTLWDPCCGSGYLLTVLGLLHRRSLRQVIASDVDPAPLELAAKNLALLSPAGL-TARELERREQSER 118 (250)
T ss_dssp HHHHHHTSSCCSCEEEEETTCTTSHHHHHHHHHTGGGEEEEEEEESCHHHHHHHHHHHHTTSHHHH-HHHHHHHHHHHHH
T ss_pred HHHHHHhcccCCCCeEEECCCCCCHHHHHHHHHhccCCCeEEEEECCHHHHHHHHHHHHHhhhccc-cccchhhhhhhhh
Confidence 344444444445679999999999999999887 444589999999999999998765320 00 001
Q ss_pred ---------------eE-------------EEEecCCCCCC-----CCCceeeEEeccccccCCC---------hHHHHH
Q 018740 232 ---------------FL-------------LVRADISRLPF-----ASSSIDAVHAGAAIHCWSS---------PSTGVA 269 (351)
Q Consensus 232 ---------------i~-------------~~~~d~~~lp~-----~~~~fD~V~~~~vl~h~~d---------~~~~l~ 269 (351)
+. +.++|+.+... ..++||+|+++..+.+..+ ...+++
T Consensus 119 ~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~fD~Iv~npp~~~~~~~~~~~~~~~~~~~l~ 198 (250)
T 1o9g_A 119 FGKPSYLEAAQAARRLRERLTAEGGALPCAIRTADVFDPRALSAVLAGSAPDVVLTDLPYGERTHWEGQVPGQPVAGLLR 198 (250)
T ss_dssp HCCHHHHHHHHHHHHHHHHHHHTTSSCCEEEEECCTTCGGGHHHHHTTCCCSEEEEECCGGGSSSSSSCCCHHHHHHHHH
T ss_pred cccccchhhhhhhhhhhhhccccccccccceeecccccccccccccCCCCceEEEeCCCeeccccccccccccHHHHHHH
Confidence 55 99999877431 3458999999876655443 348899
Q ss_pred HHHhcccCCcEEEEEee
Q 018740 270 EISRVLRPGGVFVGTTY 286 (351)
Q Consensus 270 ~i~~~LkpgG~li~~~~ 286 (351)
++.++|+|||++++...
T Consensus 199 ~~~~~LkpgG~l~~~~~ 215 (250)
T 1o9g_A 199 SLASALPAHAVIAVTDR 215 (250)
T ss_dssp HHHHHSCTTCEEEEEES
T ss_pred HHHHhcCCCcEEEEeCc
Confidence 99999999999998443
No 192
>2bm8_A Cephalosporin hydroxylase CMCI; cephamycin biosynthesis; 2.5A {Streptomyces clavuligerus} SCOP: c.66.1.50 PDB: 2bm9_A* 2br5_A* 2br4_A* 2br3_A*
Probab=99.47 E-value=5.3e-14 Score=124.36 Aligned_cols=99 Identities=16% Similarity=0.112 Sum_probs=82.2
Q ss_pred CCCeEEEEcCccCHHHHHHHHh----CCCCeEEEEeCCHHHHHHHHHHHhhhCCCCCCCeEEEEecCCCC---CCCC-Cc
Q 018740 177 LGGNIIDASCGSGLFSRIFAKS----GLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRL---PFAS-SS 248 (351)
Q Consensus 177 ~~~~vLDiGcG~G~~~~~l~~~----~~~~~v~gvD~s~~~~~~a~~~~~~~~g~~~~~i~~~~~d~~~l---p~~~-~~ 248 (351)
++.+|||||||+|..+..+++. ++..+|+|+|+|+.+++.|+. . ..+++++++|+.+. +... .+
T Consensus 81 ~~~~VLDiG~GtG~~t~~la~~~~~~~~~~~V~gvD~s~~~l~~a~~----~----~~~v~~~~gD~~~~~~l~~~~~~~ 152 (236)
T 2bm8_A 81 RPRTIVELGVYNGGSLAWFRDLTKIMGIDCQVIGIDRDLSRCQIPAS----D----MENITLHQGDCSDLTTFEHLREMA 152 (236)
T ss_dssp CCSEEEEECCTTSHHHHHHHHHHHHTTCCCEEEEEESCCTTCCCCGG----G----CTTEEEEECCSSCSGGGGGGSSSC
T ss_pred CCCEEEEEeCCCCHHHHHHHHhhhhcCCCCEEEEEeCChHHHHHHhc----c----CCceEEEECcchhHHHHHhhccCC
Confidence 4579999999999999999987 566799999999999988872 1 46899999999884 5433 47
Q ss_pred eeeEEeccccccCCChHHHHHHHHh-cccCCcEEEEEee
Q 018740 249 IDAVHAGAAIHCWSSPSTGVAEISR-VLRPGGVFVGTTY 286 (351)
Q Consensus 249 fD~V~~~~vl~h~~d~~~~l~~i~~-~LkpgG~li~~~~ 286 (351)
||+|++... | .+...++.++.+ +|||||++++.+.
T Consensus 153 fD~I~~d~~--~-~~~~~~l~~~~r~~LkpGG~lv~~d~ 188 (236)
T 2bm8_A 153 HPLIFIDNA--H-ANTFNIMKWAVDHLLEEGDYFIIEDM 188 (236)
T ss_dssp SSEEEEESS--C-SSHHHHHHHHHHHTCCTTCEEEECSC
T ss_pred CCEEEECCc--h-HhHHHHHHHHHHhhCCCCCEEEEEeC
Confidence 999998665 4 377889999997 9999999999654
No 193
>3duw_A OMT, O-methyltransferase, putative; alternating of alpha and beta with complex SAH; HET: SAH; 1.20A {Bacillus cereus} PDB: 3dul_A*
Probab=99.47 E-value=7.3e-13 Score=115.61 Aligned_cols=116 Identities=15% Similarity=0.129 Sum_probs=90.3
Q ss_pred HHHhccCCCCCCeEEEEcCccCHHHHHHHHhCC-CCeEEEEeCCHHHHHHHHHHHhhhCCCCCCCeEEEEecCCCC-C-C
Q 018740 168 LMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGL-FSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRL-P-F 244 (351)
Q Consensus 168 ~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~-~~~v~gvD~s~~~~~~a~~~~~~~~g~~~~~i~~~~~d~~~l-p-~ 244 (351)
.+...+...++.+|||||||+|..+..+++..+ ..+|+++|+++.+++.|++++... |. ..++.++.+|+.+. + +
T Consensus 49 ~l~~l~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~-~~-~~~v~~~~~d~~~~~~~~ 126 (223)
T 3duw_A 49 FLQLLVQIQGARNILEIGTLGGYSTIWLARGLSSGGRVVTLEASEKHADIARSNIERA-NL-NDRVEVRTGLALDSLQQI 126 (223)
T ss_dssp HHHHHHHHHTCSEEEEECCTTSHHHHHHHTTCCSSCEEEEEESCHHHHHHHHHHHHHT-TC-TTTEEEEESCHHHHHHHH
T ss_pred HHHHHHHhhCCCEEEEecCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHc-CC-CCcEEEEEcCHHHHHHHH
Confidence 333333444577999999999999999999865 569999999999999999998776 22 34699999998653 1 1
Q ss_pred C---CCceeeEEeccccccCCChHHHHHHHHhcccCCcEEEEEeecc
Q 018740 245 A---SSSIDAVHAGAAIHCWSSPSTGVAEISRVLRPGGVFVGTTYIV 288 (351)
Q Consensus 245 ~---~~~fD~V~~~~vl~h~~d~~~~l~~i~~~LkpgG~li~~~~~~ 288 (351)
. .++||+|++.... .+...+++++.++|+|||++++.....
T Consensus 127 ~~~~~~~fD~v~~d~~~---~~~~~~l~~~~~~L~pgG~lv~~~~~~ 170 (223)
T 3duw_A 127 ENEKYEPFDFIFIDADK---QNNPAYFEWALKLSRPGTVIIGDNVVR 170 (223)
T ss_dssp HHTTCCCCSEEEECSCG---GGHHHHHHHHHHTCCTTCEEEEESCSG
T ss_pred HhcCCCCcCEEEEcCCc---HHHHHHHHHHHHhcCCCcEEEEeCCCc
Confidence 1 2679999987653 345688999999999999999876543
No 194
>1nv8_A HEMK protein; class I adoMet-dependent methyltransferase; HET: SAM MEQ; 2.20A {Thermotoga maritima} SCOP: c.66.1.30 PDB: 1nv9_A* 1vq1_A* 1sg9_A*
Probab=99.47 E-value=4.4e-13 Score=121.70 Aligned_cols=116 Identities=15% Similarity=0.148 Sum_probs=89.2
Q ss_pred HHHHHHHhccCCCCCCeEEEEcCccCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHhhhCCCCCCCeEEEEecCCCCC
Q 018740 164 KEFELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLP 243 (351)
Q Consensus 164 ~~~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~g~~~~~i~~~~~d~~~lp 243 (351)
...+.+...+...++.+|||+|||+|.++..+++. +..+|+|+|+|+.+++.|++++... |. ..++.++++|+.+.
T Consensus 110 ~lv~~~l~~~~~~~~~~vLDlG~GsG~~~~~la~~-~~~~v~~vDis~~al~~A~~n~~~~-~l-~~~v~~~~~D~~~~- 185 (284)
T 1nv8_A 110 ELVELALELIRKYGIKTVADIGTGSGAIGVSVAKF-SDAIVFATDVSSKAVEIARKNAERH-GV-SDRFFVRKGEFLEP- 185 (284)
T ss_dssp HHHHHHHHHHHHHTCCEEEEESCTTSHHHHHHHHH-SSCEEEEEESCHHHHHHHHHHHHHT-TC-TTSEEEEESSTTGG-
T ss_pred HHHHHHHHHhcccCCCEEEEEeCchhHHHHHHHHC-CCCEEEEEECCHHHHHHHHHHHHHc-CC-CCceEEEECcchhh-
Confidence 34455555544334679999999999999999998 6779999999999999999998876 22 23599999999773
Q ss_pred CCCCce---eeEEec------------cccccCC--------ChHHHHHHHH-hcccCCcEEEEEe
Q 018740 244 FASSSI---DAVHAG------------AAIHCWS--------SPSTGVAEIS-RVLRPGGVFVGTT 285 (351)
Q Consensus 244 ~~~~~f---D~V~~~------------~vl~h~~--------d~~~~l~~i~-~~LkpgG~li~~~ 285 (351)
++ ++| |+|+++ .+. |-+ |...+++++. +.|+|||++++..
T Consensus 186 ~~-~~f~~~D~IvsnPPyi~~~~~l~~~v~-~ep~~al~~~~dgl~~~~~i~~~~l~pgG~l~~e~ 249 (284)
T 1nv8_A 186 FK-EKFASIEMILSNPPYVKSSAHLPKDVL-FEPPEALFGGEDGLDFYREFFGRYDTSGKIVLMEI 249 (284)
T ss_dssp GG-GGTTTCCEEEECCCCBCGGGSCTTSCC-CSCHHHHBCTTTSCHHHHHHHHHCCCTTCEEEEEC
T ss_pred cc-cccCCCCEEEEcCCCCCcccccChhhc-cCcHHHhcCCCcHHHHHHHHHHhcCCCCCEEEEEE
Confidence 22 478 999997 222 322 2237899999 9999999999854
No 195
>1r18_A Protein-L-isoaspartate(D-aspartate)-O-methyltrans; methyltransferase, isomerization, protein repair, S-adenosyl homocysteine; HET: SAH; 2.20A {Drosophila melanogaster} SCOP: c.66.1.7
Probab=99.47 E-value=2.1e-13 Score=119.60 Aligned_cols=112 Identities=20% Similarity=0.331 Sum_probs=88.9
Q ss_pred HHHhcc--CCCCCCeEEEEcCccCHHHHHHHHhCC------CCeEEEEeCCHHHHHHHHHHHhhhCC---CCCCCeEEEE
Q 018740 168 LMKGYL--KPVLGGNIIDASCGSGLFSRIFAKSGL------FSLVVALDYSENMLKQCYEFVQQESN---FPKENFLLVR 236 (351)
Q Consensus 168 ~l~~~l--~~~~~~~vLDiGcG~G~~~~~l~~~~~------~~~v~gvD~s~~~~~~a~~~~~~~~g---~~~~~i~~~~ 236 (351)
.+.+.+ ...++.+|||||||+|.++..+++... ..+|+++|+++.+++.+++++... + ....++.++.
T Consensus 73 ~~~~~l~~~~~~~~~VLdiG~G~G~~~~~la~~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~-~~~~~~~~~v~~~~ 151 (227)
T 1r18_A 73 FALEYLRDHLKPGARILDVGSGSGYLTACFYRYIKAKGVDADTRIVGIEHQAELVRRSKANLNTD-DRSMLDSGQLLIVE 151 (227)
T ss_dssp HHHHHTTTTCCTTCEEEEESCTTSHHHHHHHHHHHHSCCCTTCEEEEEESCHHHHHHHHHHHHHH-HHHHHHHTSEEEEE
T ss_pred HHHHHHHhhCCCCCEEEEECCCccHHHHHHHHhcccccCCccCEEEEEEcCHHHHHHHHHHHHhc-CccccCCCceEEEE
Confidence 344444 345678999999999999999988532 248999999999999999987764 1 0025899999
Q ss_pred ecCCCCCCCC-CceeeEEeccccccCCChHHHHHHHHhcccCCcEEEEEeec
Q 018740 237 ADISRLPFAS-SSIDAVHAGAAIHCWSSPSTGVAEISRVLRPGGVFVGTTYI 287 (351)
Q Consensus 237 ~d~~~lp~~~-~~fD~V~~~~vl~h~~d~~~~l~~i~~~LkpgG~li~~~~~ 287 (351)
+|+.. ++++ ++||+|++..+++|+. +++.++|||||++++....
T Consensus 152 ~d~~~-~~~~~~~fD~I~~~~~~~~~~------~~~~~~LkpgG~lvi~~~~ 196 (227)
T 1r18_A 152 GDGRK-GYPPNAPYNAIHVGAAAPDTP------TELINQLASGGRLIVPVGP 196 (227)
T ss_dssp SCGGG-CCGGGCSEEEEEECSCBSSCC------HHHHHTEEEEEEEEEEESC
T ss_pred CCccc-CCCcCCCccEEEECCchHHHH------HHHHHHhcCCCEEEEEEec
Confidence 99977 3444 7899999999999875 7889999999999998754
No 196
>2yxl_A PH0851 protein, 450AA long hypothetical FMU protein; FMU-homolog, methyltransferase, structural genomics, NPPSFA; HET: SFG; 2.55A {Pyrococcus horikoshii}
Probab=99.47 E-value=8.4e-13 Score=127.54 Aligned_cols=119 Identities=18% Similarity=0.219 Sum_probs=97.7
Q ss_pred HHHHhccCCCCCCeEEEEcCccCHHHHHHHHhCCC-CeEEEEeCCHHHHHHHHHHHhhhCCCCCCCeEEEEecCCCCC--
Q 018740 167 ELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLF-SLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLP-- 243 (351)
Q Consensus 167 ~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~-~~v~gvD~s~~~~~~a~~~~~~~~g~~~~~i~~~~~d~~~lp-- 243 (351)
..+...+...++.+|||+|||+|..+..+++..++ .+|+++|+++.+++.+++++... | ..++.++++|+..++
T Consensus 249 ~l~~~~l~~~~g~~VLDlgaG~G~~t~~la~~~~~~~~v~a~D~s~~~l~~~~~~~~~~-g--~~~v~~~~~D~~~~~~~ 325 (450)
T 2yxl_A 249 AVASIVLDPKPGETVVDLAAAPGGKTTHLAELMKNKGKIYAFDVDKMRMKRLKDFVKRM-G--IKIVKPLVKDARKAPEI 325 (450)
T ss_dssp HHHHHHHCCCTTCEEEESSCTTCHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHT-T--CCSEEEECSCTTCCSSS
T ss_pred HHHHHhcCCCCcCEEEEeCCCccHHHHHHHHHcCCCCEEEEEcCCHHHHHHHHHHHHHc-C--CCcEEEEEcChhhcchh
Confidence 34455667778889999999999999999987544 69999999999999999998876 2 358999999998876
Q ss_pred CCCCceeeEEe------ccccccCCCh----------------HHHHHHHHhcccCCcEEEEEeecc
Q 018740 244 FASSSIDAVHA------GAAIHCWSSP----------------STGVAEISRVLRPGGVFVGTTYIV 288 (351)
Q Consensus 244 ~~~~~fD~V~~------~~vl~h~~d~----------------~~~l~~i~~~LkpgG~li~~~~~~ 288 (351)
+++++||+|++ .+++++.++. ..+|+++.++|||||.+++++...
T Consensus 326 ~~~~~fD~Vl~D~Pcsg~g~~~~~pd~~~~~~~~~~~~l~~~q~~iL~~a~~~LkpGG~lvy~tcs~ 392 (450)
T 2yxl_A 326 IGEEVADKVLLDAPCTSSGTIGKNPELRWRLREDKINEMSQLQRELLESAARLVKPGGRLLYTTCSI 392 (450)
T ss_dssp SCSSCEEEEEEECCCCCGGGTTTSTTHHHHCCTTSHHHHHHHHHHHHHHHHTTEEEEEEEEEEESCC
T ss_pred hccCCCCEEEEcCCCCCCeeeccChhhhhhCCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCCC
Confidence 55578999996 3456665553 578999999999999999988654
No 197
>3c3p_A Methyltransferase; NP_951602.1, structural genomics, joint for structural genomics, JCSG, protein structure initiative transferase; 1.90A {Geobacter sulfurreducens pca}
Probab=99.47 E-value=1.4e-13 Score=119.20 Aligned_cols=105 Identities=14% Similarity=0.150 Sum_probs=86.6
Q ss_pred CCCeEEEEcCccCHHHHHHHHhCC-CCeEEEEeCCHHHHHHHHHHHhhhCCCCCCCeEEEEecCCCC-CCCCCceeeEEe
Q 018740 177 LGGNIIDASCGSGLFSRIFAKSGL-FSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRL-PFASSSIDAVHA 254 (351)
Q Consensus 177 ~~~~vLDiGcG~G~~~~~l~~~~~-~~~v~gvD~s~~~~~~a~~~~~~~~g~~~~~i~~~~~d~~~l-p~~~~~fD~V~~ 254 (351)
++.+|||||||+|..+..+++..+ ..+|+++|+|+.+++.|++++... +. ..+++++.+|+.+. +..++ ||+|++
T Consensus 56 ~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~-~~-~~~v~~~~~d~~~~~~~~~~-fD~v~~ 132 (210)
T 3c3p_A 56 QPQLVVVPGDGLGCASWWFARAISISSRVVMIDPDRDNVEHARRMLHDN-GL-IDRVELQVGDPLGIAAGQRD-IDILFM 132 (210)
T ss_dssp CCSEEEEESCGGGHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHH-SG-GGGEEEEESCHHHHHTTCCS-EEEEEE
T ss_pred CCCEEEEEcCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHC-CC-CceEEEEEecHHHHhccCCC-CCEEEE
Confidence 467999999999999999998855 579999999999999999988765 21 34699999998653 44456 999998
Q ss_pred ccccccCCChHHHHHHHHhcccCCcEEEEEeec
Q 018740 255 GAAIHCWSSPSTGVAEISRVLRPGGVFVGTTYI 287 (351)
Q Consensus 255 ~~vl~h~~d~~~~l~~i~~~LkpgG~li~~~~~ 287 (351)
... ..+...+++++.++|+|||++++....
T Consensus 133 ~~~---~~~~~~~l~~~~~~LkpgG~lv~~~~~ 162 (210)
T 3c3p_A 133 DCD---VFNGADVLERMNRCLAKNALLIAVNAL 162 (210)
T ss_dssp ETT---TSCHHHHHHHHGGGEEEEEEEEEESSS
T ss_pred cCC---hhhhHHHHHHHHHhcCCCeEEEEECcc
Confidence 743 457789999999999999999986544
No 198
>2plw_A Ribosomal RNA methyltransferase, putative; malaria, SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Plasmodium falciparum}
Probab=99.46 E-value=2.5e-13 Score=116.51 Aligned_cols=99 Identities=15% Similarity=0.283 Sum_probs=79.9
Q ss_pred CCCCCeEEEEcCccCHHHHHHHHhCC--CCeEEEEeCCHHHHHHHHHHHhhhCCCCCCCeEEEEecCCCCC---------
Q 018740 175 PVLGGNIIDASCGSGLFSRIFAKSGL--FSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLP--------- 243 (351)
Q Consensus 175 ~~~~~~vLDiGcG~G~~~~~l~~~~~--~~~v~gvD~s~~~~~~a~~~~~~~~g~~~~~i~~~~~d~~~lp--------- 243 (351)
..++.+|||+|||+|.++..+++..+ ..+|+|+|+|+.. . .+++.++++|+.+.+
T Consensus 20 ~~~~~~vLDlGcG~G~~~~~l~~~~~~~~~~v~gvD~s~~~----------~----~~~v~~~~~d~~~~~~~~~~~~~~ 85 (201)
T 2plw_A 20 LKKNKIILDIGCYPGSWCQVILERTKNYKNKIIGIDKKIMD----------P----IPNVYFIQGEIGKDNMNNIKNINY 85 (201)
T ss_dssp CCTTEEEEEESCTTCHHHHHHHHHTTTSCEEEEEEESSCCC----------C----CTTCEEEECCTTTTSSCCC-----
T ss_pred CCCCCEEEEeCCCCCHHHHHHHHHcCCCCceEEEEeCCccC----------C----CCCceEEEccccchhhhhhccccc
Confidence 34577999999999999999998865 5799999999831 1 357899999998876
Q ss_pred ----------------CCCCceeeEEeccccccCC----ChH-------HHHHHHHhcccCCcEEEEEeec
Q 018740 244 ----------------FASSSIDAVHAGAAIHCWS----SPS-------TGVAEISRVLRPGGVFVGTTYI 287 (351)
Q Consensus 244 ----------------~~~~~fD~V~~~~vl~h~~----d~~-------~~l~~i~~~LkpgG~li~~~~~ 287 (351)
+++++||+|++..++++.. +.. .+++++.++|+|||.+++..+.
T Consensus 86 i~~~~~~~~~~~~~~~~~~~~fD~v~~~~~~~~~g~~~~d~~~~~~~~~~~l~~~~~~LkpgG~lv~~~~~ 156 (201)
T 2plw_A 86 IDNMNNNSVDYKLKEILQDKKIDIILSDAAVPCIGNKIDDHLNSCELTLSITHFMEQYINIGGTYIVKMYL 156 (201)
T ss_dssp ------CHHHHHHHHHHTTCCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred cccccchhhHHHHHhhcCCCcccEEEeCCCcCCCCCcccCHHHHHHHHHHHHHHHHHHccCCCEEEEEEeC
Confidence 5667999999988877642 222 3789999999999999986654
No 199
>3tr6_A O-methyltransferase; cellular processes; HET: SAH; 2.70A {Coxiella burnetii} SCOP: c.66.1.0
Probab=99.46 E-value=3.4e-13 Score=117.78 Aligned_cols=110 Identities=14% Similarity=0.112 Sum_probs=87.7
Q ss_pred CCCCCCeEEEEcCccCHHHHHHHHhCC-CCeEEEEeCCHHHHHHHHHHHhhhCCCCCCCeEEEEecCCCC-C-CCC----
Q 018740 174 KPVLGGNIIDASCGSGLFSRIFAKSGL-FSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRL-P-FAS---- 246 (351)
Q Consensus 174 ~~~~~~~vLDiGcG~G~~~~~l~~~~~-~~~v~gvD~s~~~~~~a~~~~~~~~g~~~~~i~~~~~d~~~l-p-~~~---- 246 (351)
...++.+|||||||+|..+..+++..+ ..+|+++|+++.+++.+++++... |. ..++.++++|+.+. + +..
T Consensus 61 ~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~-~~-~~~v~~~~~d~~~~~~~~~~~~~~ 138 (225)
T 3tr6_A 61 KLMQAKKVIDIGTFTGYSAIAMGLALPKDGTLITCDVDEKSTALAKEYWEKA-GL-SDKIGLRLSPAKDTLAELIHAGQA 138 (225)
T ss_dssp HHHTCSEEEEECCTTSHHHHHHHTTCCTTCEEEEEESCHHHHHHHHHHHHHT-TC-TTTEEEEESCHHHHHHHHHTTTCT
T ss_pred HhhCCCEEEEeCCcchHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHHC-CC-CCceEEEeCCHHHHHHHhhhccCC
Confidence 334567999999999999999999854 569999999999999999998776 22 34699999998543 2 111
Q ss_pred CceeeEEeccccccCCChHHHHHHHHhcccCCcEEEEEeecc
Q 018740 247 SSIDAVHAGAAIHCWSSPSTGVAEISRVLRPGGVFVGTTYIV 288 (351)
Q Consensus 247 ~~fD~V~~~~vl~h~~d~~~~l~~i~~~LkpgG~li~~~~~~ 288 (351)
++||+|++... ..+...+++++.++|+|||++++.....
T Consensus 139 ~~fD~v~~~~~---~~~~~~~l~~~~~~L~pgG~lv~~~~~~ 177 (225)
T 3tr6_A 139 WQYDLIYIDAD---KANTDLYYEESLKLLREGGLIAVDNVLR 177 (225)
T ss_dssp TCEEEEEECSC---GGGHHHHHHHHHHHEEEEEEEEEECSSG
T ss_pred CCccEEEECCC---HHHHHHHHHHHHHhcCCCcEEEEeCCCc
Confidence 78999996553 2356789999999999999999876553
No 200
>3b3j_A Histone-arginine methyltransferase CARM1; protein arginine methyltransferase 4, APO catalytic domain, regulator, mRNA processing; 2.55A {Rattus norvegicus}
Probab=99.45 E-value=3.5e-13 Score=130.88 Aligned_cols=115 Identities=16% Similarity=0.271 Sum_probs=93.6
Q ss_pred HHHHHhccCCCCCCeEEEEcCccCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHhhhCCCCCCCeEEEEecCCCCCCC
Q 018740 166 FELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLPFA 245 (351)
Q Consensus 166 ~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~g~~~~~i~~~~~d~~~lp~~ 245 (351)
.+.+...+...++.+|||||||+|.++..+++.+ ..+|+|+|+|+ +++.|++++... |. ..+++++.+|+.+++++
T Consensus 147 ~~~il~~l~~~~~~~VLDiGcGtG~la~~la~~~-~~~V~gvD~s~-~l~~A~~~~~~~-gl-~~~v~~~~~d~~~~~~~ 222 (480)
T 3b3j_A 147 QRAILQNHTDFKDKIVLDVGCGSGILSFFAAQAG-ARKIYAVEAST-MAQHAEVLVKSN-NL-TDRIVVIPGKVEEVSLP 222 (480)
T ss_dssp HHHHHHTGGGTTTCEEEEESCSTTHHHHHHHHTT-CSEEEEEECHH-HHHHHHHHHHHT-TC-TTTEEEEESCTTTCCCS
T ss_pred HHHHHHhhhhcCCCEEEEecCcccHHHHHHHHcC-CCEEEEEEcHH-HHHHHHHHHHHc-CC-CCcEEEEECchhhCccC
Confidence 3445555555567899999999999999998864 46999999998 999999988776 22 36899999999987754
Q ss_pred CCceeeEEeccccccCCCh--HHHHHHHHhcccCCcEEEEEe
Q 018740 246 SSSIDAVHAGAAIHCWSSP--STGVAEISRVLRPGGVFVGTT 285 (351)
Q Consensus 246 ~~~fD~V~~~~vl~h~~d~--~~~l~~i~~~LkpgG~li~~~ 285 (351)
++||+|++..+++|+.+. ...+.++.++|+|||.+++..
T Consensus 223 -~~fD~Ivs~~~~~~~~~e~~~~~l~~~~~~LkpgG~li~~~ 263 (480)
T 3b3j_A 223 -EQVDIIISEPMGYMLFNERMLESYLHAKKYLKPSGNMFPTI 263 (480)
T ss_dssp -SCEEEEECCCCHHHHTCHHHHHHHHHGGGGEEEEEEEESCE
T ss_pred -CCeEEEEEeCchHhcCcHHHHHHHHHHHHhcCCCCEEEEEe
Confidence 579999998888887654 467888999999999998643
No 201
>3adn_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, polyamine biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli} PDB: 3o4f_A
Probab=99.45 E-value=9.8e-13 Score=119.84 Aligned_cols=111 Identities=16% Similarity=0.279 Sum_probs=84.5
Q ss_pred CCCeEEEEcCccCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHhhhC-C-CCCCCeEEEEecCCCC-CCCCCceeeEE
Q 018740 177 LGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQES-N-FPKENFLLVRADISRL-PFASSSIDAVH 253 (351)
Q Consensus 177 ~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~-g-~~~~~i~~~~~d~~~l-p~~~~~fD~V~ 253 (351)
++.+|||||||+|..+..+++..+..+|+++|+|+.+++.|++++.... + ...++++++.+|+... +..+++||+|+
T Consensus 83 ~~~~VLdiG~G~G~~~~~l~~~~~~~~V~~VDid~~vi~~ar~~~~~~~~~~~~~~rv~~~~~D~~~~l~~~~~~fDvIi 162 (294)
T 3adn_A 83 HAKHVLIIGGGDGAMLREVTRHKNVESITMVEIDAGVVSFCRQYLPNHNAGSYDDPRFKLVIDDGVNFVNQTSQTFDVII 162 (294)
T ss_dssp TCCEEEEESCTTCHHHHHHHTCTTCCEEEEECSCTTHHHHHHHHCHHHHSSCTTCTTCCEECSCSCC---CCCCCEEEEE
T ss_pred CCCEEEEEeCChhHHHHHHHhCCCCCEEEEEECCHHHHHHHHHhhhhcccccccCCceEEEEChHHHHHhhcCCCccEEE
Confidence 3679999999999999999988656799999999999999999876430 1 1246899999998764 34467899999
Q ss_pred eccccccCCCh----HHHHHHHHhcccCCcEEEEEeec
Q 018740 254 AGAAIHCWSSP----STGVAEISRVLRPGGVFVGTTYI 287 (351)
Q Consensus 254 ~~~vl~h~~d~----~~~l~~i~~~LkpgG~li~~~~~ 287 (351)
+.......+.. ..+++++.++|+|||++++....
T Consensus 163 ~D~~~p~~~~~~l~~~~f~~~~~~~LkpgG~lv~~~~s 200 (294)
T 3adn_A 163 SDCTDPIGPGESLFTSAFYEGCKRCLNPGGIFVAQNGV 200 (294)
T ss_dssp ECC----------CCHHHHHHHHHTEEEEEEEEEEEEE
T ss_pred ECCCCccCcchhccHHHHHHHHHHhcCCCCEEEEecCC
Confidence 95443222221 57899999999999999987643
No 202
>3sso_A Methyltransferase; macrolide, natural product, rossman fold; HET: SAH; 1.90A {Micromonospora griseorubida} PDB: 3ssn_A* 3ssm_A*
Probab=99.45 E-value=1.2e-13 Score=129.08 Aligned_cols=112 Identities=16% Similarity=0.128 Sum_probs=87.6
Q ss_pred HHHHHHHHhccCCCCCCeEEEEcCc------cCHHHHHHHH-hCCCCeEEEEeCCHHHHHHHHHHHhhhCCCCCCCeEEE
Q 018740 163 EKEFELMKGYLKPVLGGNIIDASCG------SGLFSRIFAK-SGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLV 235 (351)
Q Consensus 163 ~~~~~~l~~~l~~~~~~~vLDiGcG------~G~~~~~l~~-~~~~~~v~gvD~s~~~~~~a~~~~~~~~g~~~~~i~~~ 235 (351)
....+.+...+.. ++.+||||||| +|..+..+++ .++..+|+|+|+|+.|. .. .++++++
T Consensus 203 ~~~Ye~lL~~l~~-~~~rVLDIGCG~~~~~~TGG~Sl~la~~~fP~a~V~GVDiSp~m~--------~~----~~rI~fv 269 (419)
T 3sso_A 203 TPHYDRHFRDYRN-QQVRVLEIGVGGYKHPEWGGGSLRMWKSFFPRGQIYGLDIMDKSH--------VD----ELRIRTI 269 (419)
T ss_dssp HHHHHHHHGGGTT-SCCEEEEECCSCTTCSSCCCHHHHHHHHHCTTCEEEEEESSCCGG--------GC----BTTEEEE
T ss_pred HHHHHHHHHhhcC-CCCEEEEEecCCCcCCCCCHHHHHHHHHhCCCCEEEEEECCHHHh--------hc----CCCcEEE
Confidence 3444555544443 36799999999 6555555554 45678999999999872 11 4789999
Q ss_pred EecCCCCCCC------CCceeeEEeccccccCCChHHHHHHHHhcccCCcEEEEEeecc
Q 018740 236 RADISRLPFA------SSSIDAVHAGAAIHCWSSPSTGVAEISRVLRPGGVFVGTTYIV 288 (351)
Q Consensus 236 ~~d~~~lp~~------~~~fD~V~~~~vl~h~~d~~~~l~~i~~~LkpgG~li~~~~~~ 288 (351)
++|+.++|+. +++||+|++.. .|++.++..+|++++++|||||++++.+...
T Consensus 270 ~GDa~dlpf~~~l~~~d~sFDlVisdg-sH~~~d~~~aL~el~rvLKPGGvlVi~Dl~t 327 (419)
T 3sso_A 270 QGDQNDAEFLDRIARRYGPFDIVIDDG-SHINAHVRTSFAALFPHVRPGGLYVIEDMWT 327 (419)
T ss_dssp ECCTTCHHHHHHHHHHHCCEEEEEECS-CCCHHHHHHHHHHHGGGEEEEEEEEEECGGG
T ss_pred EecccccchhhhhhcccCCccEEEECC-cccchhHHHHHHHHHHhcCCCeEEEEEeccc
Confidence 9999998876 68999999875 4777788899999999999999999988763
No 203
>1iy9_A Spermidine synthase; rossmann fold, structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacillus subtilis} SCOP: c.66.1.17
Probab=99.44 E-value=8.3e-13 Score=119.31 Aligned_cols=110 Identities=14% Similarity=0.134 Sum_probs=86.0
Q ss_pred CCCeEEEEcCccCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHhhh-CCCCCCCeEEEEecCCC-CCCCCCceeeEEe
Q 018740 177 LGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQE-SNFPKENFLLVRADISR-LPFASSSIDAVHA 254 (351)
Q Consensus 177 ~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~-~g~~~~~i~~~~~d~~~-lp~~~~~fD~V~~ 254 (351)
.+.+|||||||+|.++..+++..+..+|+++|+++.+++.|++++... .+...++++++.+|+.. ++..+++||+|++
T Consensus 75 ~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vEid~~~v~~ar~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~fD~Ii~ 154 (275)
T 1iy9_A 75 NPEHVLVVGGGDGGVIREILKHPSVKKATLVDIDGKVIEYSKKFLPSIAGKLDDPRVDVQVDDGFMHIAKSENQYDVIMV 154 (275)
T ss_dssp SCCEEEEESCTTCHHHHHHTTCTTCSEEEEEESCHHHHHHHHHHCHHHHTTTTSTTEEEEESCSHHHHHTCCSCEEEEEE
T ss_pred CCCEEEEECCchHHHHHHHHhCCCCceEEEEECCHHHHHHHHHHhHhhccccCCCceEEEECcHHHHHhhCCCCeeEEEE
Confidence 467999999999999999998754569999999999999999987542 01225789999999865 3434678999998
Q ss_pred ccccccCCC----hHHHHHHHHhcccCCcEEEEEee
Q 018740 255 GAAIHCWSS----PSTGVAEISRVLRPGGVFVGTTY 286 (351)
Q Consensus 255 ~~vl~h~~d----~~~~l~~i~~~LkpgG~li~~~~ 286 (351)
....++.+. ...+++++.++|+|||++++...
T Consensus 155 d~~~~~~~~~~l~~~~~~~~~~~~L~pgG~lv~~~~ 190 (275)
T 1iy9_A 155 DSTEPVGPAVNLFTKGFYAGIAKALKEDGIFVAQTD 190 (275)
T ss_dssp SCSSCCSCCCCCSTTHHHHHHHHHEEEEEEEEEECC
T ss_pred CCCCCCCcchhhhHHHHHHHHHHhcCCCcEEEEEcC
Confidence 544322221 25789999999999999998653
No 204
>3ajd_A Putative methyltransferase MJ0026; tRNA, M5C, rossmann fold, structural genomics, riken structu genomics/proteomics initiative; 1.27A {Methanocaldococcus jannaschii} PDB: 3a4t_A
Probab=99.44 E-value=1.7e-13 Score=123.84 Aligned_cols=117 Identities=16% Similarity=0.108 Sum_probs=93.3
Q ss_pred HHhccCCCCCCeEEEEcCccCHHHHHHHHhCCC-CeEEEEeCCHHHHHHHHHHHhhhCCCCCCCeEEEEecCCCCCC---
Q 018740 169 MKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLF-SLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLPF--- 244 (351)
Q Consensus 169 l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~-~~v~gvD~s~~~~~~a~~~~~~~~g~~~~~i~~~~~d~~~lp~--- 244 (351)
+...+...++.+|||+|||+|..+..+++..+. .+|+|+|+|+.+++.+++++... | ..++.++.+|+..++.
T Consensus 75 ~~~~l~~~~g~~VLDlgaG~G~~t~~la~~~~~~~~v~avD~~~~~l~~~~~~~~~~-g--~~~v~~~~~D~~~~~~~~~ 151 (274)
T 3ajd_A 75 PPIVLNPREDDFILDMCAAPGGKTTHLAQLMKNKGTIVAVEISKTRTKALKSNINRM-G--VLNTIIINADMRKYKDYLL 151 (274)
T ss_dssp HHHHHCCCTTCEEEETTCTTCHHHHHHHHHTTTCSEEEEEESCHHHHHHHHHHHHHT-T--CCSEEEEESCHHHHHHHHH
T ss_pred HHHHhCCCCcCEEEEeCCCccHHHHHHHHHcCCCCEEEEECCCHHHHHHHHHHHHHh-C--CCcEEEEeCChHhcchhhh
Confidence 344556677889999999999999999986443 69999999999999999998876 2 3589999999987654
Q ss_pred -CCCceeeEEec------cccc------------cCCChHHHHHHHHhcccCCcEEEEEeecc
Q 018740 245 -ASSSIDAVHAG------AAIH------------CWSSPSTGVAEISRVLRPGGVFVGTTYIV 288 (351)
Q Consensus 245 -~~~~fD~V~~~------~vl~------------h~~d~~~~l~~i~~~LkpgG~li~~~~~~ 288 (351)
..++||+|++. +++. +......+|+++.++|||||.+++++...
T Consensus 152 ~~~~~fD~Vl~d~Pcs~~g~~~~~p~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~stcs~ 214 (274)
T 3ajd_A 152 KNEIFFDKILLDAPCSGNIIKDKNRNVSEEDIKYCSLRQKELIDIGIDLLKKDGELVYSTCSM 214 (274)
T ss_dssp HTTCCEEEEEEEECCC------------HHHHTGGGTCHHHHHHHHHHHEEEEEEEEEEESCC
T ss_pred hccccCCEEEEcCCCCCCcccccCCCCCHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEEECCC
Confidence 26789999986 2222 22455789999999999999999988654
No 205
>1sqg_A SUN protein, FMU protein; rossmann-fold, mixed beta sheet, methyltransferase-fold, RNA-binding domain; 1.65A {Escherichia coli} SCOP: a.79.1.3 c.66.1.38 PDB: 1sqf_A
Probab=99.44 E-value=1.1e-12 Score=125.92 Aligned_cols=121 Identities=20% Similarity=0.183 Sum_probs=99.1
Q ss_pred HHHHHHHhccCCCCCCeEEEEcCccCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHhhhCCCCCCCeEEEEecCCCCC
Q 018740 164 KEFELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLP 243 (351)
Q Consensus 164 ~~~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~g~~~~~i~~~~~d~~~lp 243 (351)
.....+...+...++.+|||+|||+|..+..+++.++..+|+|+|+++.+++.+++++... ..++.++++|+..++
T Consensus 233 ~~s~~~~~~l~~~~g~~VLDlgaG~G~~t~~la~~~~~~~v~a~D~~~~~l~~~~~~~~~~----g~~~~~~~~D~~~~~ 308 (429)
T 1sqg_A 233 ASAQGCMTWLAPQNGEHILDLCAAPGGKTTHILEVAPEAQVVAVDIDEQRLSRVYDNLKRL----GMKATVKQGDGRYPS 308 (429)
T ss_dssp HHHHTHHHHHCCCTTCEEEEESCTTCHHHHHHHHHCTTCEEEEEESSTTTHHHHHHHHHHT----TCCCEEEECCTTCTH
T ss_pred HHHHHHHHHcCCCCcCeEEEECCCchHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHHHHc----CCCeEEEeCchhhch
Confidence 3344555666777889999999999999999999876679999999999999999998876 346889999998876
Q ss_pred --CCCCceeeEEe------ccccccCCCh----------------HHHHHHHHhcccCCcEEEEEeecc
Q 018740 244 --FASSSIDAVHA------GAAIHCWSSP----------------STGVAEISRVLRPGGVFVGTTYIV 288 (351)
Q Consensus 244 --~~~~~fD~V~~------~~vl~h~~d~----------------~~~l~~i~~~LkpgG~li~~~~~~ 288 (351)
+++++||+|++ .+++++.++. ..+|+++.++|||||++++++...
T Consensus 309 ~~~~~~~fD~Vl~D~Pcsg~g~~~~~p~~~~~~~~~~~~~l~~~q~~~L~~a~~~LkpGG~lvystcs~ 377 (429)
T 1sqg_A 309 QWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDAIWPHLKTGGTLVYATCSV 377 (429)
T ss_dssp HHHTTCCEEEEEEECCCCCGGGTTTCTTHHHHCCTTHHHHHHHHHHHHHHHHGGGEEEEEEEEEEESCC
T ss_pred hhcccCCCCEEEEeCCCCcccccCCCcchhhcCCHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEECCC
Confidence 55678999996 2455665553 377999999999999999988653
No 206
>2qm3_A Predicted methyltransferase; putative methyltransferase, structural genomics, pyrococcus PSI-2, protein structure initiative; HET: MSE; 2.05A {Pyrococcus furiosus dsm 3638}
Probab=99.44 E-value=4.3e-12 Score=119.64 Aligned_cols=106 Identities=17% Similarity=0.088 Sum_probs=87.3
Q ss_pred CCCCeEEEEcCccCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHhhhCCCCCCCeEEEEecCCC-CCC-CCCceeeEE
Q 018740 176 VLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISR-LPF-ASSSIDAVH 253 (351)
Q Consensus 176 ~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~g~~~~~i~~~~~d~~~-lp~-~~~~fD~V~ 253 (351)
.++.+|||+| |+|.++..++..++..+|+|+|+|+.+++.|++++... |. .+++++.+|+.+ +|. .+++||+|+
T Consensus 171 ~~~~~VLDlG-G~G~~~~~la~~~~~~~v~~vDi~~~~l~~a~~~~~~~-g~--~~v~~~~~D~~~~l~~~~~~~fD~Vi 246 (373)
T 2qm3_A 171 LENKDIFVLG-DDDLTSIALMLSGLPKRIAVLDIDERLTKFIEKAANEI-GY--EDIEIFTFDLRKPLPDYALHKFDTFI 246 (373)
T ss_dssp STTCEEEEES-CTTCHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHHH-TC--CCEEEECCCTTSCCCTTTSSCBSEEE
T ss_pred CCCCEEEEEC-CCCHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHc-CC--CCEEEEEChhhhhchhhccCCccEEE
Confidence 3578999999 99999999999876679999999999999999998877 32 389999999988 664 356899999
Q ss_pred eccccccCCChHHHHHHHHhcccCCcEE-EEEee
Q 018740 254 AGAAIHCWSSPSTGVAEISRVLRPGGVF-VGTTY 286 (351)
Q Consensus 254 ~~~vl~h~~d~~~~l~~i~~~LkpgG~l-i~~~~ 286 (351)
++..+++. ....+++++.++|+|||.+ ++...
T Consensus 247 ~~~p~~~~-~~~~~l~~~~~~LkpgG~~~~~~~~ 279 (373)
T 2qm3_A 247 TDPPETLE-AIRAFVGRGIATLKGPRCAGYFGIT 279 (373)
T ss_dssp ECCCSSHH-HHHHHHHHHHHTBCSTTCEEEEEEC
T ss_pred ECCCCchH-HHHHHHHHHHHHcccCCeEEEEEEe
Confidence 98665433 2478899999999999944 55443
No 207
>1inl_A Spermidine synthase; beta-barrel, rossman fold, structural genomics, PSI, protein structure initiative; 1.50A {Thermotoga maritima} SCOP: c.66.1.17 PDB: 1jq3_A*
Probab=99.43 E-value=6.9e-13 Score=121.12 Aligned_cols=110 Identities=13% Similarity=0.088 Sum_probs=83.8
Q ss_pred CCCeEEEEcCccCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHhhh-CCCCCCCeEEEEecCCC-CCCCCCceeeEEe
Q 018740 177 LGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQE-SNFPKENFLLVRADISR-LPFASSSIDAVHA 254 (351)
Q Consensus 177 ~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~-~g~~~~~i~~~~~d~~~-lp~~~~~fD~V~~ 254 (351)
.+.+|||||||+|.++..+++..+..+|+++|+|+.+++.|++++... .+...++++++.+|+.+ ++..+++||+|++
T Consensus 90 ~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~~~~a~~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fD~Ii~ 169 (296)
T 1inl_A 90 NPKKVLIIGGGDGGTLREVLKHDSVEKAILCEVDGLVIEAARKYLKQTSCGFDDPRAEIVIANGAEYVRKFKNEFDVIII 169 (296)
T ss_dssp SCCEEEEEECTTCHHHHHHTTSTTCSEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHGGGCSSCEEEEEE
T ss_pred CCCEEEEEcCCcCHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHhHhhccccCCCceEEEECcHHHHHhhCCCCceEEEE
Confidence 357999999999999999998755679999999999999999987541 01124789999999865 3444678999998
Q ss_pred ccccccCC-----ChHHHHHHHHhcccCCcEEEEEee
Q 018740 255 GAAIHCWS-----SPSTGVAEISRVLRPGGVFVGTTY 286 (351)
Q Consensus 255 ~~vl~h~~-----d~~~~l~~i~~~LkpgG~li~~~~ 286 (351)
...-.++. ....+++++.++|+|||++++...
T Consensus 170 d~~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~ 206 (296)
T 1inl_A 170 DSTDPTAGQGGHLFTEEFYQACYDALKEDGVFSAETE 206 (296)
T ss_dssp EC----------CCSHHHHHHHHHHEEEEEEEEEECC
T ss_pred cCCCcccCchhhhhHHHHHHHHHHhcCCCcEEEEEcc
Confidence 53311121 226889999999999999999643
No 208
>1wy7_A Hypothetical protein PH1948; seven-stranded beta sheet, methyltransferase fold, structura genomics, transferase; HET: SAH; 2.20A {Pyrococcus horikoshii} SCOP: c.66.1.32
Probab=99.43 E-value=6.1e-12 Score=108.32 Aligned_cols=99 Identities=16% Similarity=0.183 Sum_probs=81.4
Q ss_pred CCCCCCeEEEEcCccCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHhhhCCCCCCCeEEEEecCCCCCCCCCceeeEE
Q 018740 174 KPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLPFASSSIDAVH 253 (351)
Q Consensus 174 ~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~g~~~~~i~~~~~d~~~lp~~~~~fD~V~ 253 (351)
...++.+|||+|||+|.++..+++.+. .+|+|+|+|+.+++.+++++... ..++.++++|+.+++ ++||+|+
T Consensus 46 ~~~~~~~vlD~g~G~G~~~~~l~~~~~-~~v~~vD~~~~~~~~a~~~~~~~----~~~~~~~~~d~~~~~---~~~D~v~ 117 (207)
T 1wy7_A 46 GDIEGKVVADLGAGTGVLSYGALLLGA-KEVICVEVDKEAVDVLIENLGEF----KGKFKVFIGDVSEFN---SRVDIVI 117 (207)
T ss_dssp TSSTTCEEEEETCTTCHHHHHHHHTTC-SEEEEEESCHHHHHHHHHHTGGG----TTSEEEEESCGGGCC---CCCSEEE
T ss_pred CCCCcCEEEEeeCCCCHHHHHHHHcCC-CEEEEEECCHHHHHHHHHHHHHc----CCCEEEEECchHHcC---CCCCEEE
Confidence 345678999999999999999998863 47999999999999999998776 238999999998875 4899999
Q ss_pred eccccccCC--ChHHHHHHHHhcccCCcEEE
Q 018740 254 AGAAIHCWS--SPSTGVAEISRVLRPGGVFV 282 (351)
Q Consensus 254 ~~~vl~h~~--d~~~~l~~i~~~LkpgG~li 282 (351)
++..+++.. ....+++++.++| ||.++
T Consensus 118 ~~~p~~~~~~~~~~~~l~~~~~~l--~~~~~ 146 (207)
T 1wy7_A 118 MNPPFGSQRKHADRPFLLKAFEIS--DVVYS 146 (207)
T ss_dssp ECCCCSSSSTTTTHHHHHHHHHHC--SEEEE
T ss_pred EcCCCccccCCchHHHHHHHHHhc--CcEEE
Confidence 998877764 3357889999988 55443
No 209
>1uir_A Polyamine aminopropyltransferase; spermidien synthase, spermine synthase, riken STR genomics/proteomics initiative, RSGI; 2.00A {Thermus thermophilus} SCOP: c.66.1.17 PDB: 3anx_A*
Probab=99.42 E-value=1.5e-12 Score=119.80 Aligned_cols=111 Identities=17% Similarity=0.121 Sum_probs=87.6
Q ss_pred CCCeEEEEcCccCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHhhh-CC-CCCCCeEEEEecCCC-CCCCCCceeeEE
Q 018740 177 LGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQE-SN-FPKENFLLVRADISR-LPFASSSIDAVH 253 (351)
Q Consensus 177 ~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~-~g-~~~~~i~~~~~d~~~-lp~~~~~fD~V~ 253 (351)
.+.+|||||||+|.++..+++..+..+|+++|+++.+++.|++++... .+ ...++++++.+|+.+ ++..+++||+|+
T Consensus 77 ~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~ar~~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fD~Ii 156 (314)
T 1uir_A 77 EPKRVLIVGGGEGATLREVLKHPTVEKAVMVDIDGELVEVAKRHMPEWHQGAFDDPRAVLVIDDARAYLERTEERYDVVI 156 (314)
T ss_dssp CCCEEEEEECTTSHHHHHHTTSTTCCEEEEEESCHHHHHHHHHHCHHHHTTGGGCTTEEEEESCHHHHHHHCCCCEEEEE
T ss_pred CCCeEEEEcCCcCHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHhHhhccccccCCceEEEEchHHHHHHhcCCCccEEE
Confidence 457999999999999999998755669999999999999999987641 01 114789999999876 344467899999
Q ss_pred ecccccc-CCC------hHHHHHHHHhcccCCcEEEEEeec
Q 018740 254 AGAAIHC-WSS------PSTGVAEISRVLRPGGVFVGTTYI 287 (351)
Q Consensus 254 ~~~vl~h-~~d------~~~~l~~i~~~LkpgG~li~~~~~ 287 (351)
+....++ ... ...++++++++|+|||++++....
T Consensus 157 ~d~~~~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~~ 197 (314)
T 1uir_A 157 IDLTDPVGEDNPARLLYTVEFYRLVKAHLNPGGVMGMQTGM 197 (314)
T ss_dssp EECCCCBSTTCGGGGGSSHHHHHHHHHTEEEEEEEEEEEEE
T ss_pred ECCCCcccccCcchhccHHHHHHHHHHhcCCCcEEEEEccC
Confidence 9765443 112 268899999999999999987543
No 210
>4hc4_A Protein arginine N-methyltransferase 6; HRMT1L6, S-adenosyl-L-homocysteine, struc genomics, structural genomics consortium, SGC; HET: SAH; 1.97A {Homo sapiens}
Probab=99.42 E-value=8.8e-13 Score=123.64 Aligned_cols=102 Identities=20% Similarity=0.347 Sum_probs=85.2
Q ss_pred CCCeEEEEcCccCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHhhhCCCCCCCeEEEEecCCCCCCCCCceeeEEec-
Q 018740 177 LGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLPFASSSIDAVHAG- 255 (351)
Q Consensus 177 ~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~g~~~~~i~~~~~d~~~lp~~~~~fD~V~~~- 255 (351)
++++|||||||+|.++..+++.|. .+|+|+|.|+ |++.|++.+..+ |. ..+|.++.++++++.++ ++||+|++-
T Consensus 83 ~~k~VLDvG~GtGiLs~~Aa~aGA-~~V~ave~s~-~~~~a~~~~~~n-~~-~~~i~~i~~~~~~~~lp-e~~DvivsE~ 157 (376)
T 4hc4_A 83 RGKTVLDVGAGTGILSIFCAQAGA-RRVYAVEASA-IWQQAREVVRFN-GL-EDRVHVLPGPVETVELP-EQVDAIVSEW 157 (376)
T ss_dssp TTCEEEEETCTTSHHHHHHHHTTC-SEEEEEECST-THHHHHHHHHHT-TC-TTTEEEEESCTTTCCCS-SCEEEEECCC
T ss_pred CCCEEEEeCCCccHHHHHHHHhCC-CEEEEEeChH-HHHHHHHHHHHc-CC-CceEEEEeeeeeeecCC-ccccEEEeec
Confidence 577999999999999999998874 5899999996 889999888776 32 57899999999998766 679999983
Q ss_pred --cccccCCChHHHHHHHHhcccCCcEEEE
Q 018740 256 --AAIHCWSSPSTGVAEISRVLRPGGVFVG 283 (351)
Q Consensus 256 --~vl~h~~d~~~~l~~i~~~LkpgG~li~ 283 (351)
..+.+-.....++....+.|+|||.++-
T Consensus 158 ~~~~l~~e~~l~~~l~a~~r~Lkp~G~~iP 187 (376)
T 4hc4_A 158 MGYGLLHESMLSSVLHARTKWLKEGGLLLP 187 (376)
T ss_dssp CBTTBTTTCSHHHHHHHHHHHEEEEEEEES
T ss_pred ccccccccchhhhHHHHHHhhCCCCceECC
Confidence 4455555677888899999999999764
No 211
>1sui_A Caffeoyl-COA O-methyltransferase; rossmann fold, protein-cofactor-substrate complex; HET: SAH FRE; 2.70A {Medicago sativa} SCOP: c.66.1.1 PDB: 1sus_A*
Probab=99.42 E-value=3.7e-13 Score=119.72 Aligned_cols=107 Identities=10% Similarity=0.046 Sum_probs=87.7
Q ss_pred CCCCeEEEEcCccCHHHHHHHHhCC-CCeEEEEeCCHHHHHHHHHHHhhhCCCCCCCeEEEEecCCCC-CC------CCC
Q 018740 176 VLGGNIIDASCGSGLFSRIFAKSGL-FSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRL-PF------ASS 247 (351)
Q Consensus 176 ~~~~~vLDiGcG~G~~~~~l~~~~~-~~~v~gvD~s~~~~~~a~~~~~~~~g~~~~~i~~~~~d~~~l-p~------~~~ 247 (351)
.++.+|||||||+|..+..+++..+ ..+|+++|+++.+++.|++++... |. ..+++++.+|+.+. +. .++
T Consensus 78 ~~~~~VLeiG~G~G~~~~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~-g~-~~~i~~~~gda~~~l~~l~~~~~~~~ 155 (247)
T 1sui_A 78 INAKNTMEIGVYTGYSLLATALAIPEDGKILAMDINKENYELGLPVIKKA-GV-DHKIDFREGPALPVLDEMIKDEKNHG 155 (247)
T ss_dssp TTCCEEEEECCGGGHHHHHHHHHSCTTCEEEEEESCCHHHHHHHHHHHHT-TC-GGGEEEEESCHHHHHHHHHHSGGGTT
T ss_pred hCcCEEEEeCCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHc-CC-CCCeEEEECCHHHHHHHHHhccCCCC
Confidence 4467999999999999999999854 579999999999999999998876 22 35799999998653 31 157
Q ss_pred ceeeEEeccccccCCChHHHHHHHHhcccCCcEEEEEeec
Q 018740 248 SIDAVHAGAAIHCWSSPSTGVAEISRVLRPGGVFVGTTYI 287 (351)
Q Consensus 248 ~fD~V~~~~vl~h~~d~~~~l~~i~~~LkpgG~li~~~~~ 287 (351)
+||+|++... ..+...+++++.++|+|||++++....
T Consensus 156 ~fD~V~~d~~---~~~~~~~l~~~~~~LkpGG~lv~d~~~ 192 (247)
T 1sui_A 156 SYDFIFVDAD---KDNYLNYHKRLIDLVKVGGVIGYDNTL 192 (247)
T ss_dssp CBSEEEECSC---STTHHHHHHHHHHHBCTTCCEEEECTT
T ss_pred CEEEEEEcCc---hHHHHHHHHHHHHhCCCCeEEEEecCC
Confidence 8999998654 346788999999999999999986543
No 212
>1ne2_A Hypothetical protein TA1320; structural genomics, conserved hypothetical protein, PSI, protein structure initiative; 1.75A {Thermoplasma acidophilum} SCOP: c.66.1.32
Probab=99.40 E-value=5e-12 Score=108.38 Aligned_cols=90 Identities=16% Similarity=0.154 Sum_probs=73.0
Q ss_pred CCCCCCeEEEEcCccCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHhhhCCCCCCCeEEEEecCCCCCCCCCceeeEE
Q 018740 174 KPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLPFASSSIDAVH 253 (351)
Q Consensus 174 ~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~g~~~~~i~~~~~d~~~lp~~~~~fD~V~ 253 (351)
...++.+|||+|||+|.++..+++.+ ..+|+|+|+|+.+++.+++++ .+++++++|+.+++ ++||+|+
T Consensus 48 ~~~~~~~vlD~gcG~G~~~~~l~~~~-~~~v~~vD~~~~~~~~a~~~~--------~~~~~~~~d~~~~~---~~~D~v~ 115 (200)
T 1ne2_A 48 GNIGGRSVIDAGTGNGILACGSYLLG-AESVTAFDIDPDAIETAKRNC--------GGVNFMVADVSEIS---GKYDTWI 115 (200)
T ss_dssp TSSBTSEEEEETCTTCHHHHHHHHTT-BSEEEEEESCHHHHHHHHHHC--------TTSEEEECCGGGCC---CCEEEEE
T ss_pred CCCCCCEEEEEeCCccHHHHHHHHcC-CCEEEEEECCHHHHHHHHHhc--------CCCEEEECcHHHCC---CCeeEEE
Confidence 34467899999999999999999884 347999999999999999873 37899999998875 6899999
Q ss_pred eccccccCCC--hHHHHHHHHhcc
Q 018740 254 AGAAIHCWSS--PSTGVAEISRVL 275 (351)
Q Consensus 254 ~~~vl~h~~d--~~~~l~~i~~~L 275 (351)
++..++|+.+ ...+++++.+++
T Consensus 116 ~~~p~~~~~~~~~~~~l~~~~~~~ 139 (200)
T 1ne2_A 116 MNPPFGSVVKHSDRAFIDKAFETS 139 (200)
T ss_dssp ECCCC-------CHHHHHHHHHHE
T ss_pred ECCCchhccCchhHHHHHHHHHhc
Confidence 9999999865 347899999988
No 213
>2hnk_A SAM-dependent O-methyltransferase; modified rossman fold; HET: SAH; 2.30A {Leptospira interrogans}
Probab=99.39 E-value=6.1e-13 Score=117.54 Aligned_cols=118 Identities=19% Similarity=0.201 Sum_probs=91.0
Q ss_pred HHHHHhccCCCCCCeEEEEcCccCHHHHHHHHhCC-CCeEEEEeCCHHHHHHHHHHHhhhCCCCCCCeEEEEecCCCC-C
Q 018740 166 FELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGL-FSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRL-P 243 (351)
Q Consensus 166 ~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~-~~~v~gvD~s~~~~~~a~~~~~~~~g~~~~~i~~~~~d~~~l-p 243 (351)
...+...+...++.+|||||||+|..+..+++..+ ..+|+++|+++.+++.|++++... |. ..++.++.+|+.+. +
T Consensus 49 ~~~l~~l~~~~~~~~VLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~-g~-~~~v~~~~~d~~~~~~ 126 (239)
T 2hnk_A 49 GQFLNILTKISGAKRIIEIGTFTGYSSLCFASALPEDGKILCCDVSEEWTNVARKYWKEN-GL-ENKIFLKLGSALETLQ 126 (239)
T ss_dssp HHHHHHHHHHHTCSEEEEECCTTCHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHHT-TC-GGGEEEEESCHHHHHH
T ss_pred HHHHHHHHHhhCcCEEEEEeCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHc-CC-CCCEEEEECCHHHHHH
Confidence 33444444444577999999999999999999854 569999999999999999998765 21 23599999997542 2
Q ss_pred --------------CCC--CceeeEEeccccccCCChHHHHHHHHhcccCCcEEEEEeecc
Q 018740 244 --------------FAS--SSIDAVHAGAAIHCWSSPSTGVAEISRVLRPGGVFVGTTYIV 288 (351)
Q Consensus 244 --------------~~~--~~fD~V~~~~vl~h~~d~~~~l~~i~~~LkpgG~li~~~~~~ 288 (351)
+++ ++||+|++....+ +...+++++.++|+|||++++.....
T Consensus 127 ~~~~~~~~~~~~~~f~~~~~~fD~I~~~~~~~---~~~~~l~~~~~~L~pgG~lv~~~~~~ 184 (239)
T 2hnk_A 127 VLIDSKSAPSWASDFAFGPSSIDLFFLDADKE---NYPNYYPLILKLLKPGGLLIADNVLW 184 (239)
T ss_dssp HHHHCSSCCGGGTTTCCSTTCEEEEEECSCGG---GHHHHHHHHHHHEEEEEEEEEECSSG
T ss_pred HHHhhcccccccccccCCCCCcCEEEEeCCHH---HHHHHHHHHHHHcCCCeEEEEEcccc
Confidence 222 7899999876543 45688999999999999999976543
No 214
>2pt6_A Spermidine synthase; transferase, structural genomics consor SGC,dcadoMet complex; HET: S4M 1PG; 2.00A {Plasmodium falciparum} PDB: 2pss_A* 2pt9_A*
Probab=99.39 E-value=1.6e-12 Score=119.89 Aligned_cols=109 Identities=14% Similarity=0.173 Sum_probs=85.0
Q ss_pred CCCeEEEEcCccCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHhhhC-CCCCCCeEEEEecCCCC-CCCCCceeeEEe
Q 018740 177 LGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQES-NFPKENFLLVRADISRL-PFASSSIDAVHA 254 (351)
Q Consensus 177 ~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~-g~~~~~i~~~~~d~~~l-p~~~~~fD~V~~ 254 (351)
++.+|||||||+|.++..+++..+..+|+++|+|+.+++.|++++.... +...++++++.+|+.+. +..+++||+|++
T Consensus 116 ~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDis~~~l~~ar~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fDvIi~ 195 (321)
T 2pt6_A 116 EPKNVLVVGGGDGGIIRELCKYKSVENIDICEIDETVIEVSKIYFKNISCGYEDKRVNVFIEDASKFLENVTNTYDVIIV 195 (321)
T ss_dssp SCCEEEEEECTTCHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCTTTSGGGGSTTEEEEESCHHHHHHHCCSCEEEEEE
T ss_pred CCCEEEEEcCCccHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhhccccCCCcEEEEEccHHHHHhhcCCCceEEEE
Confidence 4579999999999999999987556799999999999999999876410 11146899999998653 333578999998
Q ss_pred ccccccCC---C--hHHHHHHHHhcccCCcEEEEEee
Q 018740 255 GAAIHCWS---S--PSTGVAEISRVLRPGGVFVGTTY 286 (351)
Q Consensus 255 ~~vl~h~~---d--~~~~l~~i~~~LkpgG~li~~~~ 286 (351)
... +++. . ...+++++.++|+|||++++...
T Consensus 196 d~~-~p~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~ 231 (321)
T 2pt6_A 196 DSS-DPIGPAETLFNQNFYEKIYNALKPNGYCVAQCE 231 (321)
T ss_dssp ECC-CSSSGGGGGSSHHHHHHHHHHEEEEEEEEEEEC
T ss_pred CCc-CCCCcchhhhHHHHHHHHHHhcCCCcEEEEEcC
Confidence 643 2221 1 16889999999999999998754
No 215
>3cbg_A O-methyltransferase; cyanobacterium; HET: SAH FER 4FE; 2.00A {Synechocystis SP}
Probab=99.39 E-value=7e-13 Score=116.77 Aligned_cols=108 Identities=15% Similarity=0.074 Sum_probs=86.9
Q ss_pred CCCCeEEEEcCccCHHHHHHHHhCC-CCeEEEEeCCHHHHHHHHHHHhhhCCCCCCCeEEEEecCCC----CCCCC--Cc
Q 018740 176 VLGGNIIDASCGSGLFSRIFAKSGL-FSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISR----LPFAS--SS 248 (351)
Q Consensus 176 ~~~~~vLDiGcG~G~~~~~l~~~~~-~~~v~gvD~s~~~~~~a~~~~~~~~g~~~~~i~~~~~d~~~----lp~~~--~~ 248 (351)
.++.+|||||||+|..+..+++..+ ..+|+++|+++.+++.|++++... |. ..++.++.+|+.+ ++..+ ++
T Consensus 71 ~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~-g~-~~~i~~~~~d~~~~l~~l~~~~~~~~ 148 (232)
T 3cbg_A 71 TGAKQVLEIGVFRGYSALAMALQLPPDGQIIACDQDPNATAIAKKYWQKA-GV-AEKISLRLGPALATLEQLTQGKPLPE 148 (232)
T ss_dssp HTCCEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHH-TC-GGGEEEEESCHHHHHHHHHTSSSCCC
T ss_pred cCCCEEEEecCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHc-CC-CCcEEEEEcCHHHHHHHHHhcCCCCC
Confidence 3467999999999999999998754 569999999999999999988765 22 2469999999743 33333 78
Q ss_pred eeeEEeccccccCCChHHHHHHHHhcccCCcEEEEEeecc
Q 018740 249 IDAVHAGAAIHCWSSPSTGVAEISRVLRPGGVFVGTTYIV 288 (351)
Q Consensus 249 fD~V~~~~vl~h~~d~~~~l~~i~~~LkpgG~li~~~~~~ 288 (351)
||+|++.... .+...+++++.++|+|||++++.....
T Consensus 149 fD~V~~d~~~---~~~~~~l~~~~~~LkpgG~lv~~~~~~ 185 (232)
T 3cbg_A 149 FDLIFIDADK---RNYPRYYEIGLNLLRRGGLMVIDNVLW 185 (232)
T ss_dssp EEEEEECSCG---GGHHHHHHHHHHTEEEEEEEEEECTTG
T ss_pred cCEEEECCCH---HHHHHHHHHHHHHcCCCeEEEEeCCCc
Confidence 9999986552 356788999999999999999976543
No 216
>1zq9_A Probable dimethyladenosine transferase; SGC, structural genomics, structural genomics consortium; HET: SAM; 1.90A {Homo sapiens} SCOP: c.66.1.24
Probab=99.38 E-value=7.3e-13 Score=120.31 Aligned_cols=114 Identities=12% Similarity=0.122 Sum_probs=87.8
Q ss_pred HHHHHHHHhccCCCCCCeEEEEcCccCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHhhhCCCCCCCeEEEEecCCCC
Q 018740 163 EKEFELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRL 242 (351)
Q Consensus 163 ~~~~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~g~~~~~i~~~~~d~~~l 242 (351)
....+.+.+.+...++.+|||||||+|.++..+++.+. +|+|+|+|+.+++.+++++... +. ..+++++.+|+.++
T Consensus 14 ~~i~~~i~~~~~~~~~~~VLDiG~G~G~lt~~L~~~~~--~v~~vD~~~~~~~~a~~~~~~~-~~-~~~v~~~~~D~~~~ 89 (285)
T 1zq9_A 14 PLIINSIIDKAALRPTDVVLEVGPGTGNMTVKLLEKAK--KVVACELDPRLVAELHKRVQGT-PV-ASKLQVLVGDVLKT 89 (285)
T ss_dssp HHHHHHHHHHTCCCTTCEEEEECCTTSTTHHHHHHHSS--EEEEEESCHHHHHHHHHHHTTS-TT-GGGEEEEESCTTTS
T ss_pred HHHHHHHHHhcCCCCCCEEEEEcCcccHHHHHHHhhCC--EEEEEECCHHHHHHHHHHHHhc-CC-CCceEEEEcceecc
Confidence 44556777777777788999999999999999999976 9999999999999999987653 11 25899999999988
Q ss_pred CCCCCceeeEEec-----------cccccCCChHHHH----HHH--HhcccCCcEEE
Q 018740 243 PFASSSIDAVHAG-----------AAIHCWSSPSTGV----AEI--SRVLRPGGVFV 282 (351)
Q Consensus 243 p~~~~~fD~V~~~-----------~vl~h~~d~~~~l----~~i--~~~LkpgG~li 282 (351)
+++ .||+|+++ .+++|.++...++ +|+ +++|+|||.++
T Consensus 90 ~~~--~fD~vv~nlpy~~~~~~~~~~l~~~~~~~~~~~m~qkEva~r~vlkPGg~~y 144 (285)
T 1zq9_A 90 DLP--FFDTCVANLPYQISSPFVFKLLLHRPFFRCAILMFQREFALRLVAKPGDKLY 144 (285)
T ss_dssp CCC--CCSEEEEECCGGGHHHHHHHHHHCSSCCSEEEEEEEHHHHHHHHCCTTCTTC
T ss_pred cch--hhcEEEEecCcccchHHHHHHHhcCcchhhhhhhhhHHHHHHHhcCCCCccc
Confidence 764 79999996 4455554443211 333 46899999653
No 217
>3gjy_A Spermidine synthase; APC62791, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.47A {Corynebacterium glutamicum atcc 13032}
Probab=99.38 E-value=1.6e-12 Score=118.90 Aligned_cols=106 Identities=16% Similarity=0.158 Sum_probs=85.7
Q ss_pred CeEEEEcCccCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHhhhCCCCCCCeEEEEecCCCC--CCCCCceeeEEecc
Q 018740 179 GNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRL--PFASSSIDAVHAGA 256 (351)
Q Consensus 179 ~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~g~~~~~i~~~~~d~~~l--p~~~~~fD~V~~~~ 256 (351)
.+|||||||+|.++..+++..+..+++++|+++.+++.|++++... ..++++++.+|+.+. .+++++||+|++..
T Consensus 91 ~rVLdIG~G~G~la~~la~~~p~~~v~~VEidp~vi~~Ar~~~~~~---~~~rv~v~~~Da~~~l~~~~~~~fDvIi~D~ 167 (317)
T 3gjy_A 91 LRITHLGGGACTMARYFADVYPQSRNTVVELDAELARLSREWFDIP---RAPRVKIRVDDARMVAESFTPASRDVIIRDV 167 (317)
T ss_dssp CEEEEESCGGGHHHHHHHHHSTTCEEEEEESCHHHHHHHHHHSCCC---CTTTEEEEESCHHHHHHTCCTTCEEEEEECC
T ss_pred CEEEEEECCcCHHHHHHHHHCCCcEEEEEECCHHHHHHHHHhcccc---CCCceEEEECcHHHHHhhccCCCCCEEEECC
Confidence 4999999999999999999777779999999999999999987543 247899999998664 23467899999854
Q ss_pred ccccC-C---ChHHHHHHHHhcccCCcEEEEEeec
Q 018740 257 AIHCW-S---SPSTGVAEISRVLRPGGVFVGTTYI 287 (351)
Q Consensus 257 vl~h~-~---d~~~~l~~i~~~LkpgG~li~~~~~ 287 (351)
..+.. + ....++++++++|+|||++++....
T Consensus 168 ~~~~~~~~~L~t~efl~~~~r~LkpgGvlv~~~~~ 202 (317)
T 3gjy_A 168 FAGAITPQNFTTVEFFEHCHRGLAPGGLYVANCGD 202 (317)
T ss_dssp STTSCCCGGGSBHHHHHHHHHHEEEEEEEEEEEEE
T ss_pred CCccccchhhhHHHHHHHHHHhcCCCcEEEEEecC
Confidence 32221 1 1258899999999999999987754
No 218
>2f8l_A Hypothetical protein LMO1582; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE SAM; 2.20A {Listeria monocytogenes} SCOP: c.66.1.45
Probab=99.38 E-value=9.1e-12 Score=116.13 Aligned_cols=125 Identities=12% Similarity=0.106 Sum_probs=96.5
Q ss_pred CCCCcHHHHHHHHhcc----CCCCCCeEEEEcCccCHHHHHHHHhCCC-----CeEEEEeCCHHHHHHHHHHHhhhCCCC
Q 018740 158 GFPGPEKEFELMKGYL----KPVLGGNIIDASCGSGLFSRIFAKSGLF-----SLVVALDYSENMLKQCYEFVQQESNFP 228 (351)
Q Consensus 158 ~~~~~~~~~~~l~~~l----~~~~~~~vLDiGcG~G~~~~~l~~~~~~-----~~v~gvD~s~~~~~~a~~~~~~~~g~~ 228 (351)
.++.+......+...+ ...++.+|||+|||+|.++..+++..+. .+++|+|+++.+++.|+.++...
T Consensus 107 ~~~TP~~i~~~~~~ll~~l~~~~~~~~VlDp~cGsG~~l~~~~~~~~~~~~~~~~v~GiDi~~~~~~~a~~n~~~~---- 182 (344)
T 2f8l_A 107 HQMTPDSIGFIVAYLLEKVIQKKKNVSILDPACGTANLLTTVINQLELKGDVDVHASGVDVDDLLISLALVGADLQ---- 182 (344)
T ss_dssp GCCCCHHHHHHHHHHHHHHHTTCSEEEEEETTCTTSHHHHHHHHHHHTTSSCEEEEEEEESCHHHHHHHHHHHHHH----
T ss_pred cCCChHHHHHHHHHHHHHhcCCCCCCEEEeCCCCccHHHHHHHHHHHHhcCCCceEEEEECCHHHHHHHHHHHHhC----
Confidence 3556665544433332 4445679999999999999998877532 58999999999999999988766
Q ss_pred CCCeEEEEecCCCCCCCCCceeeEEeccccccCCChH------------------HHHHHHHhcccCCcEEEEEeec
Q 018740 229 KENFLLVRADISRLPFASSSIDAVHAGAAIHCWSSPS------------------TGVAEISRVLRPGGVFVGTTYI 287 (351)
Q Consensus 229 ~~~i~~~~~d~~~lp~~~~~fD~V~~~~vl~h~~d~~------------------~~l~~i~~~LkpgG~li~~~~~ 287 (351)
..++.+.++|..... ..+.||+|+++-.+.++++.. .+++++.+.|+|||++++..+.
T Consensus 183 g~~~~i~~~D~l~~~-~~~~fD~Ii~NPPfg~~~~~~~~~~~~~~~~~g~~~~~~~~l~~~~~~Lk~gG~~~~v~p~ 258 (344)
T 2f8l_A 183 RQKMTLLHQDGLANL-LVDPVDVVISDLPVGYYPDDENAKTFELCREEGHSFAHFLFIEQGMRYTKPGGYLFFLVPD 258 (344)
T ss_dssp TCCCEEEESCTTSCC-CCCCEEEEEEECCCSEESCHHHHTTSTTCCSSSCEEHHHHHHHHHHHTEEEEEEEEEEEEG
T ss_pred CCCceEEECCCCCcc-ccCCccEEEECCCCCCcCchhhhhhccccCCCCcchHHHHHHHHHHHHhCCCCEEEEEECc
Confidence 337889999986633 457899999997776654332 5799999999999999998876
No 219
>2frx_A Hypothetical protein YEBU; rossmann-type S-adenosylmethionine-dependent methyltransfera domain; 2.90A {Escherichia coli}
Probab=99.37 E-value=6.4e-12 Score=121.82 Aligned_cols=118 Identities=16% Similarity=0.126 Sum_probs=93.9
Q ss_pred HHHhccCCC--CCCeEEEEcCccCHHHHHHHHhCC-CCeEEEEeCCHHHHHHHHHHHhhhCCCCCCCeEEEEecCCCCCC
Q 018740 168 LMKGYLKPV--LGGNIIDASCGSGLFSRIFAKSGL-FSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLPF 244 (351)
Q Consensus 168 ~l~~~l~~~--~~~~vLDiGcG~G~~~~~l~~~~~-~~~v~gvD~s~~~~~~a~~~~~~~~g~~~~~i~~~~~d~~~lp~ 244 (351)
.+...+... ++.+|||+|||+|..+..+++... ...|+++|+|+.+++.+++++... | ..++.++++|+..++.
T Consensus 106 l~~~~L~~~~~~g~~VLDl~aGpG~kt~~lA~~~~~~g~V~avDis~~~l~~~~~n~~r~-g--~~nv~~~~~D~~~~~~ 182 (479)
T 2frx_A 106 LPVAALFADGNAPQRVMDVAAAPGSKTTQISARMNNEGAILANEFSASRVKVLHANISRC-G--ISNVALTHFDGRVFGA 182 (479)
T ss_dssp HHHHHHTTTTCCCSEEEESSCTTSHHHHHHHHHTTTCSEEEEECSSHHHHHHHHHHHHHH-T--CCSEEEECCCSTTHHH
T ss_pred HHHHHhCcccCCCCEEEEeCCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHc-C--CCcEEEEeCCHHHhhh
Confidence 334455555 788999999999999999998742 469999999999999999999876 2 3589999999988763
Q ss_pred -CCCceeeEEec------cccccCCC----------------hHHHHHHHHhcccCCcEEEEEeecc
Q 018740 245 -ASSSIDAVHAG------AAIHCWSS----------------PSTGVAEISRVLRPGGVFVGTTYIV 288 (351)
Q Consensus 245 -~~~~fD~V~~~------~vl~h~~d----------------~~~~l~~i~~~LkpgG~li~~~~~~ 288 (351)
.+++||+|++. +++.+-++ ...+|+++.++|||||++++++...
T Consensus 183 ~~~~~fD~Il~D~PcSg~G~~~~~pd~~~~~~~~~~~~l~~~q~~iL~~a~~~LkpGG~LvysTcs~ 249 (479)
T 2frx_A 183 AVPEMFDAILLDAPCSGEGVVRKDPDALKNWSPESNQEIAATQRELIDSAFHALRPGGTLVYSTCTL 249 (479)
T ss_dssp HSTTCEEEEEEECCCCCGGGGGTCTTSSSSCCHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEESCC
T ss_pred hccccCCEEEECCCcCCcccccCCHHHHhhcCHhHHHHHHHHHHHHHHHHHHhcCCCCEEEEecccC
Confidence 45789999972 34444333 2367999999999999999988654
No 220
>2avd_A Catechol-O-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Homo sapiens} SCOP: c.66.1.1
Probab=99.37 E-value=1.1e-12 Score=114.82 Aligned_cols=115 Identities=14% Similarity=0.092 Sum_probs=89.5
Q ss_pred HHHhccCCCCCCeEEEEcCccCHHHHHHHHhCC-CCeEEEEeCCHHHHHHHHHHHhhhCCCCCCCeEEEEecCCCC-C-C
Q 018740 168 LMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGL-FSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRL-P-F 244 (351)
Q Consensus 168 ~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~-~~~v~gvD~s~~~~~~a~~~~~~~~g~~~~~i~~~~~d~~~l-p-~ 244 (351)
.+.......++.+|||+|||+|..+..+++..+ ..+|+++|+++.+++.|++++... |. ..+++++.+|+.+. + +
T Consensus 60 ~l~~l~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~-g~-~~~i~~~~~d~~~~~~~~ 137 (229)
T 2avd_A 60 LLANLARLIQAKKALDLGTFTGYSALALALALPADGRVVTCEVDAQPPELGRPLWRQA-EA-EHKIDLRLKPALETLDEL 137 (229)
T ss_dssp HHHHHHHHTTCCEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCSHHHHHHHHHHHHT-TC-TTTEEEEESCHHHHHHHH
T ss_pred HHHHHHHhcCCCEEEEEcCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHC-CC-CCeEEEEEcCHHHHHHHH
Confidence 333333334567999999999999999998754 569999999999999999998775 22 36899999998543 1 1
Q ss_pred CC----CceeeEEeccccccCCChHHHHHHHHhcccCCcEEEEEeec
Q 018740 245 AS----SSIDAVHAGAAIHCWSSPSTGVAEISRVLRPGGVFVGTTYI 287 (351)
Q Consensus 245 ~~----~~fD~V~~~~vl~h~~d~~~~l~~i~~~LkpgG~li~~~~~ 287 (351)
.. ++||+|++... ..+...+++++.++|+|||++++....
T Consensus 138 ~~~~~~~~~D~v~~d~~---~~~~~~~l~~~~~~L~pgG~lv~~~~~ 181 (229)
T 2avd_A 138 LAAGEAGTFDVAVVDAD---KENCSAYYERCLQLLRPGGILAVLRVL 181 (229)
T ss_dssp HHTTCTTCEEEEEECSC---STTHHHHHHHHHHHEEEEEEEEEECCS
T ss_pred HhcCCCCCccEEEECCC---HHHHHHHHHHHHHHcCCCeEEEEECCC
Confidence 11 68999998654 345678899999999999999986654
No 221
>3lcv_B Sisomicin-gentamicin resistance methylase SGM; antibiotic resistance, methyltransferase, transferase; HET: SAM; 2.00A {Micromonospora zionensis} PDB: 3lcu_A*
Probab=99.37 E-value=3.7e-12 Score=111.89 Aligned_cols=153 Identities=12% Similarity=0.056 Sum_probs=109.9
Q ss_pred HHHHHHHhccCCCCCCeEEEEcCccCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHhhhCCCCCCCeEEEEecCCCCC
Q 018740 164 KEFELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLP 243 (351)
Q Consensus 164 ~~~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~g~~~~~i~~~~~d~~~lp 243 (351)
.....+...+.. ..+|||||||+|.++..++...+..+|+++|+++.|++.+++++... ..+..+...|...-+
T Consensus 121 ~fY~~i~~~i~~--p~~VLDLGCG~GpLAl~~~~~~p~a~y~a~DId~~~le~a~~~l~~~----g~~~~~~v~D~~~~~ 194 (281)
T 3lcv_B 121 EFYRELFRHLPR--PNTLRDLACGLNPLAAPWMGLPAETVYIASDIDARLVGFVDEALTRL----NVPHRTNVADLLEDR 194 (281)
T ss_dssp HHHHHHGGGSCC--CSEEEETTCTTGGGCCTTTTCCTTCEEEEEESBHHHHHHHHHHHHHT----TCCEEEEECCTTTSC
T ss_pred HHHHHHHhccCC--CceeeeeccCccHHHHHHHhhCCCCEEEEEeCCHHHHHHHHHHHHhc----CCCceEEEeeecccC
Confidence 334445555533 67999999999999999998888889999999999999999999887 566889999987655
Q ss_pred CCCCceeeEEeccccccCCChH--HHHHHHHhcccCCcEEEEEeeccCCCCCcchHHHHHHHHHhhccCCccCCCHHHHH
Q 018740 244 FASSSIDAVHAGAAIHCWSSPS--TGVAEISRVLRPGGVFVGTTYIVDGPFNLIPFSRLLRQNMMQISGSYTFLSEREIE 321 (351)
Q Consensus 244 ~~~~~fD~V~~~~vl~h~~d~~--~~l~~i~~~LkpgG~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~ 321 (351)
+.+.||+|+++-+++|+.+.. ..+ ++.+.|+|+|+++-- +... .....+. +... -.+.|+
T Consensus 195 -p~~~~DvaL~lkti~~Le~q~kg~g~-~ll~aL~~~~vvVSf-p~ks-l~Grs~g---m~~~-----------Y~~~~e 256 (281)
T 3lcv_B 195 -LDEPADVTLLLKTLPCLETQQRGSGW-EVIDIVNSPNIVVTF-PTKS-LGQRSKG---MFQN-----------YSQSFE 256 (281)
T ss_dssp -CCSCCSEEEETTCHHHHHHHSTTHHH-HHHHHSSCSEEEEEE-ECC--------C---HHHH-----------HHHHHH
T ss_pred -CCCCcchHHHHHHHHHhhhhhhHHHH-HHHHHhCCCCEEEec-cchh-hcCCCcc---hhhH-----------HHHHHH
Confidence 467899999999999997553 444 899999999977643 3211 0011111 1111 135788
Q ss_pred HHHHHCCCeEEEEEecCeE
Q 018740 322 DLCRACGLVDFKCTRNRGF 340 (351)
Q Consensus 322 ~ll~~aGf~~v~~~~~g~~ 340 (351)
+.+.+.|..+-+.......
T Consensus 257 ~~~~~~g~~~~~~~~~nEl 275 (281)
T 3lcv_B 257 SQARERSCRIQRLEIGNEL 275 (281)
T ss_dssp HHHHHHTCCEEEEEETTEE
T ss_pred HHHHhcCCceeeeeecCee
Confidence 8888889965544444443
No 222
>3k6r_A Putative transferase PH0793; structural genomics, PSI structure initiative, midwest center for structural genomic unknown function; 2.10A {Pyrococcus horikoshii} PDB: 3a25_A* 3a26_A*
Probab=99.37 E-value=1.8e-11 Score=110.14 Aligned_cols=136 Identities=13% Similarity=0.115 Sum_probs=104.3
Q ss_pred HHHHhccCCCCCCeEEEEcCccCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHhhhCCCCCCCeEEEEecCCCCCCCC
Q 018740 167 ELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLPFAS 246 (351)
Q Consensus 167 ~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~g~~~~~i~~~~~d~~~lp~~~ 246 (351)
..+...+. ++.+|||+|||+|.++..+++.+. .+|+++|+++.+++.+++++..+ +. ..++.++.+|+.+++ ..
T Consensus 117 ~ri~~~~~--~g~~VlD~~aG~G~~~i~~a~~g~-~~V~avD~np~a~~~~~~N~~~N-~v-~~~v~~~~~D~~~~~-~~ 190 (278)
T 3k6r_A 117 VRMAKVAK--PDELVVDMFAGIGHLSLPIAVYGK-AKVIAIEKDPYTFKFLVENIHLN-KV-EDRMSAYNMDNRDFP-GE 190 (278)
T ss_dssp HHHHHHCC--TTCEEEETTCTTTTTTHHHHHHTC-CEEEEECCCHHHHHHHHHHHHHT-TC-TTTEEEECSCTTTCC-CC
T ss_pred HHHHHhcC--CCCEEEEecCcCcHHHHHHHHhcC-CeEEEEECCHHHHHHHHHHHHHc-CC-CCcEEEEeCcHHHhc-cc
Confidence 34555554 488999999999999999998873 58999999999999999999887 33 467999999998876 35
Q ss_pred CceeeEEeccccccCCChHHHHHHHHhcccCCcEEEEEeeccCCCCCcchHHHHHHHHHhhccCCccCCCHHHHHHHHHH
Q 018740 247 SSIDAVHAGAAIHCWSSPSTGVAEISRVLRPGGVFVGTTYIVDGPFNLIPFSRLLRQNMMQISGSYTFLSEREIEDLCRA 326 (351)
Q Consensus 247 ~~fD~V~~~~vl~h~~d~~~~l~~i~~~LkpgG~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~~ll~~ 326 (351)
+.||.|++... +....+|..+.++|+|||++.+.....+. ...-...+.++++++.
T Consensus 191 ~~~D~Vi~~~p----~~~~~~l~~a~~~lk~gG~ih~~~~~~e~--------------------~~~~~~~e~i~~~~~~ 246 (278)
T 3k6r_A 191 NIADRILMGYV----VRTHEFIPKALSIAKDGAIIHYHNTVPEK--------------------LMPREPFETFKRITKE 246 (278)
T ss_dssp SCEEEEEECCC----SSGGGGHHHHHHHEEEEEEEEEEEEEEGG--------------------GTTTTTHHHHHHHHHH
T ss_pred cCCCEEEECCC----CcHHHHHHHHHHHcCCCCEEEEEeeeccc--------------------ccchhHHHHHHHHHHH
Confidence 78999997532 34457788899999999998776554321 0111234677888899
Q ss_pred CCCeEE
Q 018740 327 CGLVDF 332 (351)
Q Consensus 327 aGf~~v 332 (351)
.|+.+.
T Consensus 247 ~g~~v~ 252 (278)
T 3k6r_A 247 YGYDVE 252 (278)
T ss_dssp TTCEEE
T ss_pred cCCcEE
Confidence 999753
No 223
>3m6w_A RRNA methylase; rRNA methyltransferase, 5-methylcytidine, RSMF, adoMet, MULT specific, methyltransferase, transferase; HET: CXM SAM; 1.30A {Thermus thermophilus} PDB: 3m6v_A* 3m6u_A* 3m6x_A*
Probab=99.36 E-value=1.5e-12 Score=125.27 Aligned_cols=117 Identities=20% Similarity=0.180 Sum_probs=93.3
Q ss_pred HHHhccCCCCCCeEEEEcCccCHHHHHHHHhCC-CCeEEEEeCCHHHHHHHHHHHhhhCCCCCCCeEEEEecCCCCC-CC
Q 018740 168 LMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGL-FSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLP-FA 245 (351)
Q Consensus 168 ~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~-~~~v~gvD~s~~~~~~a~~~~~~~~g~~~~~i~~~~~d~~~lp-~~ 245 (351)
.+...+...++.+|||+|||+|..+..+++..+ ...|+++|+|+.+++.+++++... | .. +.++++|+.+++ ..
T Consensus 92 l~a~~L~~~~g~~VLDlgaGpG~kt~~LA~~~~~~g~V~AvDis~~~l~~a~~n~~r~-G--~~-v~~~~~Da~~l~~~~ 167 (464)
T 3m6w_A 92 AVGVLLDPKPGERVLDLAAAPGGKTTHLAARMGGKGLLLANEVDGKRVRGLLENVERW-G--AP-LAVTQAPPRALAEAF 167 (464)
T ss_dssp HHHHHHCCCTTCEEEESSCTTCHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHH-C--CC-CEEECSCHHHHHHHH
T ss_pred HHHHhcCcCCCCEEEEEcCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHc-C--Ce-EEEEECCHHHhhhhc
Confidence 445566677889999999999999999998743 368999999999999999999887 3 23 899999987765 24
Q ss_pred CCceeeEEe------ccccccCCCh----------------HHHHHHHHhcccCCcEEEEEeecc
Q 018740 246 SSSIDAVHA------GAAIHCWSSP----------------STGVAEISRVLRPGGVFVGTTYIV 288 (351)
Q Consensus 246 ~~~fD~V~~------~~vl~h~~d~----------------~~~l~~i~~~LkpgG~li~~~~~~ 288 (351)
.++||+|++ ..++.+-++. ..+|+++.++|||||+++.++-..
T Consensus 168 ~~~FD~Il~D~PcSg~G~~rr~pd~~~~~~~~~~~~l~~~Q~~iL~~a~~~LkpGG~LvysTCs~ 232 (464)
T 3m6w_A 168 GTYFHRVLLDAPCSGEGMFRKDREAARHWGPSAPKRMAEVQKALLAQASRLLGPGGVLVYSTCTF 232 (464)
T ss_dssp CSCEEEEEEECCCCCGGGTTTCTTSGGGCCTTHHHHHHHHHHHHHHHHHTTEEEEEEEEEEESCC
T ss_pred cccCCEEEECCCcCCccccccChHHhhhcCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeccC
Confidence 678999995 2344443432 578999999999999999987653
No 224
>2i7c_A Spermidine synthase; transferase, structural genomics consor; HET: AAT 1PG; 1.71A {Plasmodium falciparum} PDB: 2hte_A* 3b7p_A* 3rie_A* 2pwp_A*
Probab=99.36 E-value=4.2e-12 Score=115.19 Aligned_cols=110 Identities=14% Similarity=0.155 Sum_probs=85.8
Q ss_pred CCCeEEEEcCccCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHhhhC-CCCCCCeEEEEecCCCC-CCCCCceeeEEe
Q 018740 177 LGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQES-NFPKENFLLVRADISRL-PFASSSIDAVHA 254 (351)
Q Consensus 177 ~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~-g~~~~~i~~~~~d~~~l-p~~~~~fD~V~~ 254 (351)
++.+|||||||+|.++..+++..+..+++++|+++.+++.|++++.... +...++++++.+|+.+. +..+++||+|++
T Consensus 78 ~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~a~~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fD~Ii~ 157 (283)
T 2i7c_A 78 EPKNVLVVGGGDGGIIRELCKYKSVENIDICEIDETVIEVSKIYFKNISCGYEDKRVNVFIEDASKFLENVTNTYDVIIV 157 (283)
T ss_dssp SCCEEEEEECTTSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCTTTSGGGGSTTEEEEESCHHHHHHHCCSCEEEEEE
T ss_pred CCCeEEEEeCCcCHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHhHHhccccCCCcEEEEECChHHHHHhCCCCceEEEE
Confidence 4679999999999999999987666799999999999999999875420 01147899999998663 323678999998
Q ss_pred ccccccCCCh----HHHHHHHHhcccCCcEEEEEee
Q 018740 255 GAAIHCWSSP----STGVAEISRVLRPGGVFVGTTY 286 (351)
Q Consensus 255 ~~vl~h~~d~----~~~l~~i~~~LkpgG~li~~~~ 286 (351)
....++.+.. ..++++++++|+|||++++...
T Consensus 158 d~~~~~~~~~~l~~~~~l~~~~~~L~pgG~lv~~~~ 193 (283)
T 2i7c_A 158 DSSDPIGPAETLFNQNFYEKIYNALKPNGYCVAQCE 193 (283)
T ss_dssp ECCCTTTGGGGGSSHHHHHHHHHHEEEEEEEEEECC
T ss_pred cCCCCCCcchhhhHHHHHHHHHHhcCCCcEEEEECC
Confidence 5443222211 5889999999999999998654
No 225
>1xj5_A Spermidine synthase 1; structural genomics, protein structure initiative, CESG, AT1G23820, putrescine aminopropyl transferase, SPDS1; 2.70A {Arabidopsis thaliana} SCOP: c.66.1.17 PDB: 2q41_A
Probab=99.36 E-value=2.2e-12 Score=119.59 Aligned_cols=110 Identities=18% Similarity=0.175 Sum_probs=85.5
Q ss_pred CCCCeEEEEcCccCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHhhh-CCCCCCCeEEEEecCCCC-C-CCCCceeeE
Q 018740 176 VLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQE-SNFPKENFLLVRADISRL-P-FASSSIDAV 252 (351)
Q Consensus 176 ~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~-~g~~~~~i~~~~~d~~~l-p-~~~~~fD~V 252 (351)
..+.+|||||||+|.++..+++..+..+|+++|+|+.+++.|++++... .+...++++++.+|+.+. + .++++||+|
T Consensus 119 ~~~~~VLdIG~G~G~~a~~la~~~~~~~V~~VDis~~~l~~Ar~~~~~~~~gl~~~rv~~~~~D~~~~l~~~~~~~fDlI 198 (334)
T 1xj5_A 119 PNPKKVLVIGGGDGGVLREVARHASIEQIDMCEIDKMVVDVSKQFFPDVAIGYEDPRVNLVIGDGVAFLKNAAEGSYDAV 198 (334)
T ss_dssp SCCCEEEEETCSSSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGSTTEEEEESCHHHHHHTSCTTCEEEE
T ss_pred CCCCEEEEECCCccHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhhccccCCCcEEEEECCHHHHHHhccCCCccEE
Confidence 3467999999999999999998865679999999999999999987541 011146899999998653 2 345789999
Q ss_pred Eecccc--ccCCC--hHHHHHHHHhcccCCcEEEEEe
Q 018740 253 HAGAAI--HCWSS--PSTGVAEISRVLRPGGVFVGTT 285 (351)
Q Consensus 253 ~~~~vl--~h~~d--~~~~l~~i~~~LkpgG~li~~~ 285 (351)
++.... ++..+ ...+++++.++|+|||++++..
T Consensus 199 i~d~~~p~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~ 235 (334)
T 1xj5_A 199 IVDSSDPIGPAKELFEKPFFQSVARALRPGGVVCTQA 235 (334)
T ss_dssp EECCCCTTSGGGGGGSHHHHHHHHHHEEEEEEEEEEC
T ss_pred EECCCCccCcchhhhHHHHHHHHHHhcCCCcEEEEec
Confidence 985431 11111 3688999999999999999864
No 226
>2b2c_A Spermidine synthase; beta-alpha, transferase; 2.50A {Caenorhabditis elegans} SCOP: c.66.1.17
Probab=99.36 E-value=2.5e-12 Score=118.18 Aligned_cols=108 Identities=14% Similarity=0.132 Sum_probs=82.3
Q ss_pred CCCeEEEEcCccCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHhhhC-CCCCCCeEEEEecCCC-CCCCCCceeeEEe
Q 018740 177 LGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQES-NFPKENFLLVRADISR-LPFASSSIDAVHA 254 (351)
Q Consensus 177 ~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~-g~~~~~i~~~~~d~~~-lp~~~~~fD~V~~ 254 (351)
.+.+|||||||+|..+..+++..+..+|+++|+++.+++.|++++.... +...++++++.+|+.+ ++..+++||+|++
T Consensus 108 ~~~~VLdIG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~Ar~~~~~~~~~~~~~rv~~~~~D~~~~l~~~~~~fD~Ii~ 187 (314)
T 2b2c_A 108 DPKRVLIIGGGDGGILREVLKHESVEKVTMCEIDEMVIDVAKKFLPGMSCGFSHPKLDLFCGDGFEFLKNHKNEFDVIIT 187 (314)
T ss_dssp SCCEEEEESCTTSHHHHHHTTCTTCCEEEEECSCHHHHHHHHHHCTTTSGGGGCTTEEEECSCHHHHHHHCTTCEEEEEE
T ss_pred CCCEEEEEcCCcCHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHHhccccCCCCEEEEEChHHHHHHhcCCCceEEEE
Confidence 3579999999999999999987666799999999999999999875420 1114789999999865 3334678999998
Q ss_pred ccccccCCCh-----HHHHHHHHhcccCCcEEEEEe
Q 018740 255 GAAIHCWSSP-----STGVAEISRVLRPGGVFVGTT 285 (351)
Q Consensus 255 ~~vl~h~~d~-----~~~l~~i~~~LkpgG~li~~~ 285 (351)
... +++... ..+++++.++|+|||++++..
T Consensus 188 d~~-~~~~~~~~l~t~~~l~~~~~~LkpgG~lv~~~ 222 (314)
T 2b2c_A 188 DSS-DPVGPAESLFGQSYYELLRDALKEDGILSSQG 222 (314)
T ss_dssp CCC--------------HHHHHHHHEEEEEEEEEEC
T ss_pred cCC-CCCCcchhhhHHHHHHHHHhhcCCCeEEEEEC
Confidence 553 333211 578999999999999999865
No 227
>2nyu_A Putative ribosomal RNA methyltransferase 2; SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.76A {Homo sapiens}
Probab=99.36 E-value=2.9e-12 Score=109.25 Aligned_cols=99 Identities=19% Similarity=0.285 Sum_probs=76.8
Q ss_pred CCCCCeEEEEcCccCHHHHHHHHhCCC---------CeEEEEeCCHHHHHHHHHHHhhhCCCCCCCeEEE-EecCCCCC-
Q 018740 175 PVLGGNIIDASCGSGLFSRIFAKSGLF---------SLVVALDYSENMLKQCYEFVQQESNFPKENFLLV-RADISRLP- 243 (351)
Q Consensus 175 ~~~~~~vLDiGcG~G~~~~~l~~~~~~---------~~v~gvD~s~~~~~~a~~~~~~~~g~~~~~i~~~-~~d~~~lp- 243 (351)
..++.+|||+|||+|.++..+++..+. .+|+|+|+|+.+ ...++.++ .+|+...+
T Consensus 20 ~~~~~~vLDlGcG~G~~~~~la~~~~~~~~~~~~~~~~v~~vD~s~~~--------------~~~~~~~~~~~d~~~~~~ 85 (196)
T 2nyu_A 20 LRPGLRVLDCGAAPGAWSQVAVQKVNAAGTDPSSPVGFVLGVDLLHIF--------------PLEGATFLCPADVTDPRT 85 (196)
T ss_dssp CCTTCEEEEETCCSCHHHHHHHHHTTTTCCCTTSCCCEEEEECSSCCC--------------CCTTCEEECSCCTTSHHH
T ss_pred CCCCCEEEEeCCCCCHHHHHHHHHhccccccccCCCceEEEEechhcc--------------cCCCCeEEEeccCCCHHH
Confidence 445789999999999999999998532 699999999831 13568888 88887643
Q ss_pred -------CCCCceeeEEecccccc----CCCh-------HHHHHHHHhcccCCcEEEEEeec
Q 018740 244 -------FASSSIDAVHAGAAIHC----WSSP-------STGVAEISRVLRPGGVFVGTTYI 287 (351)
Q Consensus 244 -------~~~~~fD~V~~~~vl~h----~~d~-------~~~l~~i~~~LkpgG~li~~~~~ 287 (351)
+++++||+|++...++. ..+. ..+++++.++|+|||.+++.++.
T Consensus 86 ~~~~~~~~~~~~fD~V~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~~~~~ 147 (196)
T 2nyu_A 86 SQRILEVLPGRRADVILSDMAPNATGFRDLDHDRLISLCLTLLSVTPDILQPGGTFLCKTWA 147 (196)
T ss_dssp HHHHHHHSGGGCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEECC
T ss_pred HHHHHHhcCCCCCcEEEeCCCCCCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCEEEEEecC
Confidence 33568999999765443 2333 47899999999999999998764
No 228
>2wa2_A Non-structural protein 5; transferase, S-adenosyl-L- methionine, virion, membrane, flavivirus, N7-methyltransferase, 2'-O-methyltransferase; HET: SAM; 1.80A {Modoc virus} PDB: 2wa1_A*
Probab=99.35 E-value=4.2e-13 Score=121.10 Aligned_cols=106 Identities=19% Similarity=0.169 Sum_probs=78.4
Q ss_pred CCCCCCeEEEEcCccCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHhhhCCCCCCCeEEE--EecCCCCCCCCCceee
Q 018740 174 KPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLV--RADISRLPFASSSIDA 251 (351)
Q Consensus 174 ~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~g~~~~~i~~~--~~d~~~lp~~~~~fD~ 251 (351)
...++.+|||+|||+|.++..+++. .+|+|+|+++ |+..++++.... .....++.++ ++|+..+| +++||+
T Consensus 79 ~~~~g~~VLDlGcGtG~~s~~la~~---~~V~gVD~s~-m~~~a~~~~~~~-~~~~~~v~~~~~~~D~~~l~--~~~fD~ 151 (276)
T 2wa2_A 79 GVELKGTVVDLGCGRGSWSYYAASQ---PNVREVKAYT-LGTSGHEKPRLV-ETFGWNLITFKSKVDVTKME--PFQADT 151 (276)
T ss_dssp SCCCCEEEEEESCTTCHHHHHHHTS---TTEEEEEEEC-CCCTTSCCCCCC-CCTTGGGEEEECSCCGGGCC--CCCCSE
T ss_pred CCCCCCEEEEeccCCCHHHHHHHHc---CCEEEEECch-hhhhhhhchhhh-hhcCCCeEEEeccCcHhhCC--CCCcCE
Confidence 3456789999999999999999988 3899999998 543332210000 0001278899 99998876 678999
Q ss_pred EEeccccccCCChH-------HHHHHHHhcccCCc--EEEEEeec
Q 018740 252 VHAGAAIHCWSSPS-------TGVAEISRVLRPGG--VFVGTTYI 287 (351)
Q Consensus 252 V~~~~vl~h~~d~~-------~~l~~i~~~LkpgG--~li~~~~~ 287 (351)
|+|..+ ++..++. .+|+++.++|+||| .+++..+.
T Consensus 152 Vvsd~~-~~~~~~~~d~~~~l~~L~~~~r~LkpGG~~~~v~~~~~ 195 (276)
T 2wa2_A 152 VLCDIG-ESNPTAAVEASRTLTVLNVISRWLEYNQGCGFCVKVLN 195 (276)
T ss_dssp EEECCC-CCCSCHHHHHHHHHHHHHHHHHHHHHSTTCEEEEEESC
T ss_pred EEECCC-cCCCchhhhHHHHHHHHHHHHHHhccCCCcEEEEEeCC
Confidence 999877 5544432 37899999999999 99987665
No 229
>2o07_A Spermidine synthase; structural genomics, structural genomics consortium, SGC, transferase; HET: SPD MTA; 1.89A {Homo sapiens} SCOP: c.66.1.17 PDB: 2o06_A* 2o05_A* 2o0l_A* 3rw9_A*
Probab=99.35 E-value=1.5e-12 Score=119.34 Aligned_cols=112 Identities=13% Similarity=0.098 Sum_probs=85.5
Q ss_pred CCCCeEEEEcCccCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHhhh-CCCCCCCeEEEEecCCC-CCCCCCceeeEE
Q 018740 176 VLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQE-SNFPKENFLLVRADISR-LPFASSSIDAVH 253 (351)
Q Consensus 176 ~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~-~g~~~~~i~~~~~d~~~-lp~~~~~fD~V~ 253 (351)
..+.+|||||||+|.++..+++..+..+|+++|+++.+++.|++++... .+...++++++.+|+.+ ++..+++||+|+
T Consensus 94 ~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~ar~~~~~~~~~~~~~rv~v~~~Da~~~l~~~~~~fD~Ii 173 (304)
T 2o07_A 94 PNPRKVLIIGGGDGGVLREVVKHPSVESVVQCEIDEDVIQVSKKFLPGMAIGYSSSKLTLHVGDGFEFMKQNQDAFDVII 173 (304)
T ss_dssp SSCCEEEEEECTTSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHHHTCSSCEEEEE
T ss_pred CCCCEEEEECCCchHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHhHHhhcccCCCcEEEEECcHHHHHhhCCCCceEEE
Confidence 3467999999999999999998866679999999999999999987641 01124789999999865 344467899999
Q ss_pred eccccccCC----ChHHHHHHHHhcccCCcEEEEEeec
Q 018740 254 AGAAIHCWS----SPSTGVAEISRVLRPGGVFVGTTYI 287 (351)
Q Consensus 254 ~~~vl~h~~----d~~~~l~~i~~~LkpgG~li~~~~~ 287 (351)
+....+..+ ....+++++.++|+|||++++...+
T Consensus 174 ~d~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~~ 211 (304)
T 2o07_A 174 TDSSDPMGPAESLFKESYYQLMKTALKEDGVLCCQGEC 211 (304)
T ss_dssp EECC-----------CHHHHHHHHHEEEEEEEEEEEEC
T ss_pred ECCCCCCCcchhhhHHHHHHHHHhccCCCeEEEEecCC
Confidence 854432211 1246899999999999999987643
No 230
>2oxt_A Nucleoside-2'-O-methyltransferase; flavivirus, viral enzyme, RNA capping, S-adenosyl-L-methionine, viral protein; HET: SAM; 2.90A {Meaban virus}
Probab=99.35 E-value=4.6e-13 Score=120.21 Aligned_cols=107 Identities=19% Similarity=0.131 Sum_probs=78.5
Q ss_pred cCCCCCCeEEEEcCccCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHhhhCCCCCCCeEEE--EecCCCCCCCCCcee
Q 018740 173 LKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLV--RADISRLPFASSSID 250 (351)
Q Consensus 173 l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~g~~~~~i~~~--~~d~~~lp~~~~~fD 250 (351)
....++.+|||+|||+|.++..+++. .+|+|+|+++ |+..+++..... .....++.++ ++|+..++ +++||
T Consensus 70 ~~~~~g~~VLDlGcGtG~~s~~la~~---~~V~gvD~s~-m~~~a~~~~~~~-~~~~~~v~~~~~~~D~~~l~--~~~fD 142 (265)
T 2oxt_A 70 GYVELTGRVVDLGCGRGGWSYYAASR---PHVMDVRAYT-LGVGGHEVPRIT-ESYGWNIVKFKSRVDIHTLP--VERTD 142 (265)
T ss_dssp TSCCCCEEEEEESCTTSHHHHHHHTS---TTEEEEEEEC-CCCSSCCCCCCC-CBTTGGGEEEECSCCTTTSC--CCCCS
T ss_pred CCCCCCCEEEEeCcCCCHHHHHHHHc---CcEEEEECch-hhhhhhhhhhhh-hccCCCeEEEecccCHhHCC--CCCCc
Confidence 33456789999999999999999987 3899999998 533322110000 0001278899 89999876 67899
Q ss_pred eEEeccccccCCChH-------HHHHHHHhcccCCc--EEEEEeec
Q 018740 251 AVHAGAAIHCWSSPS-------TGVAEISRVLRPGG--VFVGTTYI 287 (351)
Q Consensus 251 ~V~~~~vl~h~~d~~-------~~l~~i~~~LkpgG--~li~~~~~ 287 (351)
+|+|..+ ++..++. .+|+++.++|+||| .+++..+.
T Consensus 143 ~V~sd~~-~~~~~~~~d~~~~l~~L~~~~r~LkpGG~~~fv~kv~~ 187 (265)
T 2oxt_A 143 VIMCDVG-ESSPKWSVESERTIKILELLEKWKVKNPSADFVVKVLC 187 (265)
T ss_dssp EEEECCC-CCCSCHHHHHHHHHHHHHHHHHHHHHCTTCEEEEEESC
T ss_pred EEEEeCc-ccCCccchhHHHHHHHHHHHHHHhccCCCeEEEEEeCC
Confidence 9999877 5554432 37899999999999 99987765
No 231
>1mjf_A Spermidine synthase; spermidine synthetase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus furiosus} SCOP: c.66.1.17 PDB: 2e5w_A* 2zsu_A*
Probab=99.35 E-value=4e-12 Score=115.16 Aligned_cols=107 Identities=12% Similarity=0.096 Sum_probs=83.5
Q ss_pred CCCeEEEEcCccCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHhhhC-CC-------CCCCeEEEEecCCCC-CCCCC
Q 018740 177 LGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQES-NF-------PKENFLLVRADISRL-PFASS 247 (351)
Q Consensus 177 ~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~-g~-------~~~~i~~~~~d~~~l-p~~~~ 247 (351)
.+.+|||||||+|.++..+++. +..+|+++|+++.+++.|++++ ... +. ..++++++.+|+.+. +. ++
T Consensus 75 ~~~~VLdiG~G~G~~~~~l~~~-~~~~v~~vDid~~~i~~ar~~~-~~~~~l~~~~~~~~~~~v~~~~~D~~~~l~~-~~ 151 (281)
T 1mjf_A 75 KPKRVLVIGGGDGGTVREVLQH-DVDEVIMVEIDEDVIMVSKDLI-KIDNGLLEAMLNGKHEKAKLTIGDGFEFIKN-NR 151 (281)
T ss_dssp CCCEEEEEECTTSHHHHHHTTS-CCSEEEEEESCHHHHHHHHHHT-CTTTTHHHHHHTTCCSSEEEEESCHHHHHHH-CC
T ss_pred CCCeEEEEcCCcCHHHHHHHhC-CCCEEEEEECCHHHHHHHHHHH-hhccccccccccCCCCcEEEEECchHHHhcc-cC
Confidence 4679999999999999999988 5679999999999999999987 210 11 247899999998653 32 57
Q ss_pred ceeeEEeccccccCCC-----hHHHHHHHHhcccCCcEEEEEeec
Q 018740 248 SIDAVHAGAAIHCWSS-----PSTGVAEISRVLRPGGVFVGTTYI 287 (351)
Q Consensus 248 ~fD~V~~~~vl~h~~d-----~~~~l~~i~~~LkpgG~li~~~~~ 287 (351)
+||+|++.... ++.. ...+++++.++|+|||++++....
T Consensus 152 ~fD~Ii~d~~~-~~~~~~~l~~~~~l~~~~~~L~pgG~lv~~~~~ 195 (281)
T 1mjf_A 152 GFDVIIADSTD-PVGPAKVLFSEEFYRYVYDALNNPGIYVTQAGS 195 (281)
T ss_dssp CEEEEEEECCC-CC-----TTSHHHHHHHHHHEEEEEEEEEEEEE
T ss_pred CeeEEEECCCC-CCCcchhhhHHHHHHHHHHhcCCCcEEEEEcCC
Confidence 89999986543 2211 257899999999999999987543
No 232
>3c3y_A Pfomt, O-methyltransferase; plant secondary metabolism; HET: SAH; 1.37A {Mesembryanthemum crystallinum}
Probab=99.34 E-value=2.2e-12 Score=114.00 Aligned_cols=107 Identities=13% Similarity=0.145 Sum_probs=86.5
Q ss_pred CCCCeEEEEcCccCHHHHHHHHhCC-CCeEEEEeCCHHHHHHHHHHHhhhCCCCCCCeEEEEecCCCC-C-C-----CCC
Q 018740 176 VLGGNIIDASCGSGLFSRIFAKSGL-FSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRL-P-F-----ASS 247 (351)
Q Consensus 176 ~~~~~vLDiGcG~G~~~~~l~~~~~-~~~v~gvD~s~~~~~~a~~~~~~~~g~~~~~i~~~~~d~~~l-p-~-----~~~ 247 (351)
.++.+|||||||+|..+..+++..+ ..+++++|+++.+++.|++++... |. ..+++++.+|+.+. + + +.+
T Consensus 69 ~~~~~VLeiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~-g~-~~~i~~~~gda~~~l~~l~~~~~~~~ 146 (237)
T 3c3y_A 69 VNAKKTIEVGVFTGYSLLLTALSIPDDGKITAIDFDREAYEIGLPFIRKA-GV-EHKINFIESDAMLALDNLLQGQESEG 146 (237)
T ss_dssp TTCCEEEEECCTTSHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHHT-TC-GGGEEEEESCHHHHHHHHHHSTTCTT
T ss_pred hCCCEEEEeCCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHc-CC-CCcEEEEEcCHHHHHHHHHhccCCCC
Confidence 4567999999999999999998854 579999999999999999998876 32 34799999998653 2 1 257
Q ss_pred ceeeEEeccccccCCChHHHHHHHHhcccCCcEEEEEeec
Q 018740 248 SIDAVHAGAAIHCWSSPSTGVAEISRVLRPGGVFVGTTYI 287 (351)
Q Consensus 248 ~fD~V~~~~vl~h~~d~~~~l~~i~~~LkpgG~li~~~~~ 287 (351)
+||+|++.... .+...+++++.++|+|||++++....
T Consensus 147 ~fD~I~~d~~~---~~~~~~l~~~~~~L~pGG~lv~d~~~ 183 (237)
T 3c3y_A 147 SYDFGFVDADK---PNYIKYHERLMKLVKVGGIVAYDNTL 183 (237)
T ss_dssp CEEEEEECSCG---GGHHHHHHHHHHHEEEEEEEEEECTT
T ss_pred CcCEEEECCch---HHHHHHHHHHHHhcCCCeEEEEecCC
Confidence 89999986432 34578899999999999999886543
No 233
>3m4x_A NOL1/NOP2/SUN family protein; mtase domain, PUA domain, RRM motif, transferase; 2.28A {Enterococcus faecium}
Probab=99.32 E-value=2.8e-12 Score=123.18 Aligned_cols=118 Identities=14% Similarity=0.082 Sum_probs=92.2
Q ss_pred HHHhccCCCCCCeEEEEcCccCHHHHHHHHhC-CCCeEEEEeCCHHHHHHHHHHHhhhCCCCCCCeEEEEecCCCCC-CC
Q 018740 168 LMKGYLKPVLGGNIIDASCGSGLFSRIFAKSG-LFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLP-FA 245 (351)
Q Consensus 168 ~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~-~~~~v~gvD~s~~~~~~a~~~~~~~~g~~~~~i~~~~~d~~~lp-~~ 245 (351)
.+...+...++.+|||+|||+|..+..+++.. ....|+++|+|+.+++.+++++... | ..++.++.+|+..++ ..
T Consensus 96 l~~~~L~~~~g~~VLDlcaGpGgkt~~lA~~~~~~g~V~AvDis~~rl~~~~~n~~r~-g--~~nv~v~~~Da~~l~~~~ 172 (456)
T 3m4x_A 96 IVGTAAAAKPGEKVLDLCAAPGGKSTQLAAQMKGKGLLVTNEIFPKRAKILSENIERW-G--VSNAIVTNHAPAELVPHF 172 (456)
T ss_dssp HHHHHHCCCTTCEEEESSCTTCHHHHHHHHHHTTCSEEEEECSSHHHHHHHHHHHHHH-T--CSSEEEECCCHHHHHHHH
T ss_pred HHHHHcCCCCCCEEEEECCCcCHHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHc-C--CCceEEEeCCHHHhhhhc
Confidence 45556677788999999999999999998763 2358999999999999999999887 3 457999999987764 23
Q ss_pred CCceeeEEecc------ccccCCC----------------hHHHHHHHHhcccCCcEEEEEeecc
Q 018740 246 SSSIDAVHAGA------AIHCWSS----------------PSTGVAEISRVLRPGGVFVGTTYIV 288 (351)
Q Consensus 246 ~~~fD~V~~~~------vl~h~~d----------------~~~~l~~i~~~LkpgG~li~~~~~~ 288 (351)
+++||+|++.- ++.+-++ ...+|+++.++|||||+++.+|-..
T Consensus 173 ~~~FD~Il~DaPCSg~G~~rr~p~~~~~~~~~~~~~l~~~Q~~iL~~a~~~LkpGG~LvYsTCs~ 237 (456)
T 3m4x_A 173 SGFFDRIVVDAPCSGEGMFRKDPNAIKEWTEESPLYCQKRQQEILSSAIKMLKNKGQLIYSTCTF 237 (456)
T ss_dssp TTCEEEEEEECCCCCGGGTTTCHHHHHHCCTTHHHHHHHHHHHHHHHHHHTEEEEEEEEEEESCC
T ss_pred cccCCEEEECCCCCCccccccCHHHhhhcCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEEeec
Confidence 57899999732 2322111 1267999999999999999887653
No 234
>3frh_A 16S rRNA methylase; methyltransferase domain, helical N-terminal domain, methyltransferase, plasmid, transferase; HET: SAH; 1.20A {Escherichia coli} PDB: 3fri_A* 3b89_A*
Probab=99.31 E-value=2.2e-11 Score=105.96 Aligned_cols=100 Identities=13% Similarity=0.099 Sum_probs=83.3
Q ss_pred CCCCeEEEEcCccCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHhhhCCCCCCCeEEEEecCCCCCCCCCceeeEEec
Q 018740 176 VLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLPFASSSIDAVHAG 255 (351)
Q Consensus 176 ~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~g~~~~~i~~~~~d~~~lp~~~~~fD~V~~~ 255 (351)
.++.+|||||||.|.++..+. +..+|+|+|+|+.+++.+++.+... ..+..+..+|....+.+ ++||+|++.
T Consensus 104 ~~p~~VLDlGCG~gpLal~~~---~~~~y~a~DId~~~i~~ar~~~~~~----g~~~~~~v~D~~~~~~~-~~~DvvLll 175 (253)
T 3frh_A 104 ETPRRVLDIACGLNPLALYER---GIASVWGCDIHQGLGDVITPFAREK----DWDFTFALQDVLCAPPA-EAGDLALIF 175 (253)
T ss_dssp CCCSEEEEETCTTTHHHHHHT---TCSEEEEEESBHHHHHHHHHHHHHT----TCEEEEEECCTTTSCCC-CBCSEEEEE
T ss_pred CCCCeEEEecCCccHHHHHhc---cCCeEEEEeCCHHHHHHHHHHHHhc----CCCceEEEeecccCCCC-CCcchHHHH
Confidence 457799999999999999888 4569999999999999999998776 58889999999887754 489999999
Q ss_pred cccccCCChH-HHHHHHHhcccCCcEEEE
Q 018740 256 AAIHCWSSPS-TGVAEISRVLRPGGVFVG 283 (351)
Q Consensus 256 ~vl~h~~d~~-~~l~~i~~~LkpgG~li~ 283 (351)
-++||+.+.. ..+.++.+.|+++|+++-
T Consensus 176 k~lh~LE~q~~~~~~~ll~aL~~~~vvVs 204 (253)
T 3frh_A 176 KLLPLLEREQAGSAMALLQSLNTPRMAVS 204 (253)
T ss_dssp SCHHHHHHHSTTHHHHHHHHCBCSEEEEE
T ss_pred HHHHHhhhhchhhHHHHHHHhcCCCEEEE
Confidence 8888885432 334488889999876654
No 235
>3dou_A Ribosomal RNA large subunit methyltransferase J; cell division, structural genomics, protein structure initiative, PSI; HET: SAM; 1.45A {Thermoplasma volcanium} SCOP: c.66.1.0
Probab=99.31 E-value=1.1e-11 Score=105.71 Aligned_cols=97 Identities=16% Similarity=0.238 Sum_probs=74.9
Q ss_pred CCCCCeEEEEcCccCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHhhhCCCCCCCeEEEEecCCCCCCC---------
Q 018740 175 PVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLPFA--------- 245 (351)
Q Consensus 175 ~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~g~~~~~i~~~~~d~~~lp~~--------- 245 (351)
..++.+|||+|||+|.++..+++.+ .+|+|+|+++.. ..+++.++++|+.+.+..
T Consensus 23 ~~~g~~VLDlG~G~G~~s~~la~~~--~~V~gvD~~~~~--------------~~~~v~~~~~D~~~~~~~~~~~~~~~~ 86 (191)
T 3dou_A 23 VRKGDAVIEIGSSPGGWTQVLNSLA--RKIISIDLQEME--------------EIAGVRFIRCDIFKETIFDDIDRALRE 86 (191)
T ss_dssp SCTTCEEEEESCTTCHHHHHHTTTC--SEEEEEESSCCC--------------CCTTCEEEECCTTSSSHHHHHHHHHHH
T ss_pred CCCCCEEEEEeecCCHHHHHHHHcC--CcEEEEeccccc--------------cCCCeEEEEccccCHHHHHHHHHHhhc
Confidence 4568899999999999999999884 499999999741 146899999999886421
Q ss_pred --CCceeeEEeccccccCC----C-------hHHHHHHHHhcccCCcEEEEEeec
Q 018740 246 --SSSIDAVHAGAAIHCWS----S-------PSTGVAEISRVLRPGGVFVGTTYI 287 (351)
Q Consensus 246 --~~~fD~V~~~~vl~h~~----d-------~~~~l~~i~~~LkpgG~li~~~~~ 287 (351)
.++||+|++........ | ...+++.+.++|||||.|++..+.
T Consensus 87 ~~~~~~D~Vlsd~~~~~~g~~~~d~~~~~~l~~~~l~~a~~~LkpGG~lv~k~~~ 141 (191)
T 3dou_A 87 EGIEKVDDVVSDAMAKVSGIPSRDHAVSYQIGQRVMEIAVRYLRNGGNVLLKQFQ 141 (191)
T ss_dssp HTCSSEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred ccCCcceEEecCCCcCCCCCcccCHHHHHHHHHHHHHHHHHHccCCCEEEEEEcC
Confidence 14899999965432211 1 246788999999999999987664
No 236
>2cmg_A Spermidine synthase; transferase, putrescine aminopropyltransferase, spermidine biosynthesis, polyamine biosynthesis, SPEE; 2.0A {Helicobacter pylori} PDB: 2cmh_A
Probab=99.30 E-value=4.3e-12 Score=113.66 Aligned_cols=100 Identities=12% Similarity=0.077 Sum_probs=82.8
Q ss_pred CCCeEEEEcCccCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHhhh-CCCCCCCeEEEEecCCCCCCCCCceeeEEec
Q 018740 177 LGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQE-SNFPKENFLLVRADISRLPFASSSIDAVHAG 255 (351)
Q Consensus 177 ~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~-~g~~~~~i~~~~~d~~~lp~~~~~fD~V~~~ 255 (351)
.+.+|||||||+|.++..+++. + .+|+++|+++.+++.|++++... .+...++++++.+|..... ++||+|++.
T Consensus 72 ~~~~VL~iG~G~G~~~~~ll~~-~-~~v~~veid~~~i~~ar~~~~~~~~~~~~~rv~~~~~D~~~~~---~~fD~Ii~d 146 (262)
T 2cmg_A 72 ELKEVLIVDGFDLELAHQLFKY-D-THIDFVQADEKILDSFISFFPHFHEVKNNKNFTHAKQLLDLDI---KKYDLIFCL 146 (262)
T ss_dssp CCCEEEEESSCCHHHHHHHTTS-S-CEEEEECSCHHHHGGGTTTSTTHHHHHTCTTEEEESSGGGSCC---CCEEEEEES
T ss_pred CCCEEEEEeCCcCHHHHHHHhC-C-CEEEEEECCHHHHHHHHHHHHhhccccCCCeEEEEechHHHHH---hhCCEEEEC
Confidence 4579999999999999999888 5 79999999999999999875431 0111468999999997764 789999985
Q ss_pred cccccCCChHHHHHHHHhcccCCcEEEEEee
Q 018740 256 AAIHCWSSPSTGVAEISRVLRPGGVFVGTTY 286 (351)
Q Consensus 256 ~vl~h~~d~~~~l~~i~~~LkpgG~li~~~~ 286 (351)
..+|..+++++.++|+|||++++...
T Consensus 147 -----~~dp~~~~~~~~~~L~pgG~lv~~~~ 172 (262)
T 2cmg_A 147 -----QEPDIHRIDGLKRMLKEDGVFISVAK 172 (262)
T ss_dssp -----SCCCHHHHHHHHTTEEEEEEEEEEEE
T ss_pred -----CCChHHHHHHHHHhcCCCcEEEEEcC
Confidence 46788899999999999999998643
No 237
>1qam_A ERMC' methyltransferase; rRNA methyltransferase ERMC', cofactor analogs; 2.20A {Bacillus subtilis} SCOP: c.66.1.24 PDB: 1qan_A* 1qao_A* 1qaq_A* 2erc_A
Probab=99.30 E-value=3.6e-12 Score=113.09 Aligned_cols=111 Identities=14% Similarity=0.226 Sum_probs=84.6
Q ss_pred HHHHHHHHhccCCCCCCeEEEEcCccCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHhhhCCCCCCCeEEEEecCCCC
Q 018740 163 EKEFELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRL 242 (351)
Q Consensus 163 ~~~~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~g~~~~~i~~~~~d~~~l 242 (351)
....+.+.+.+...++.+|||||||+|.++..+++.+. +|+|+|+|+.+++.+++++.. .++++++.+|+.++
T Consensus 16 ~~~~~~i~~~~~~~~~~~VLDiG~G~G~lt~~l~~~~~--~v~~vD~~~~~~~~a~~~~~~-----~~~v~~~~~D~~~~ 88 (244)
T 1qam_A 16 KHNIDKIMTNIRLNEHDNIFEIGSGKGHFTLELVQRCN--FVTAIEIDHKLCKTTENKLVD-----HDNFQVLNKDILQF 88 (244)
T ss_dssp HHHHHHHHTTCCCCTTCEEEEECCTTSHHHHHHHHHSS--EEEEECSCHHHHHHHHHHTTT-----CCSEEEECCCGGGC
T ss_pred HHHHHHHHHhCCCCCCCEEEEEeCCchHHHHHHHHcCC--eEEEEECCHHHHHHHHHhhcc-----CCCeEEEEChHHhC
Confidence 45566777777777788999999999999999999975 999999999999999988653 36899999999998
Q ss_pred CCCC-CceeeEEec-----------cccccCCChHHHH----HHHHhcccCCcEE
Q 018740 243 PFAS-SSIDAVHAG-----------AAIHCWSSPSTGV----AEISRVLRPGGVF 281 (351)
Q Consensus 243 p~~~-~~fD~V~~~-----------~vl~h~~d~~~~l----~~i~~~LkpgG~l 281 (351)
++++ ..|+ |+++ ..++|...+..++ +.+.|+++|+|.+
T Consensus 89 ~~~~~~~~~-vv~nlPy~~~~~~l~~~l~~~~~~~~~lm~q~e~a~rll~~~G~l 142 (244)
T 1qam_A 89 KFPKNQSYK-IFGNIPYNISTDIIRKIVFDSIADEIYLIVEYGFAKRLLNTKRSL 142 (244)
T ss_dssp CCCSSCCCE-EEEECCGGGHHHHHHHHHHSCCCSEEEEEEEHHHHHHHTCTTSHH
T ss_pred CcccCCCeE-EEEeCCcccCHHHHHHHHhcCCCCeEEEEEEHHHHHHHhcCCcch
Confidence 8764 4564 4433 3344444444444 4477888888854
No 238
>3c0k_A UPF0064 protein YCCW; PUA domain, adoMet dependent methyltransferase fold; 2.00A {Escherichia coli K12}
Probab=99.27 E-value=1.5e-11 Score=116.91 Aligned_cols=110 Identities=17% Similarity=0.179 Sum_probs=87.6
Q ss_pred CCCCeEEEEcCccCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHhhhCCCCCCCeEEEEecCCCCCC----CCCceee
Q 018740 176 VLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLPF----ASSSIDA 251 (351)
Q Consensus 176 ~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~g~~~~~i~~~~~d~~~lp~----~~~~fD~ 251 (351)
.++.+|||+|||+|.++..+++.+ ..+|+|+|+|+.+++.|++++..+ |....+++++++|+.+... ..++||+
T Consensus 219 ~~~~~VLDl~cG~G~~sl~la~~g-~~~V~~vD~s~~al~~a~~n~~~n-gl~~~~v~~~~~D~~~~~~~~~~~~~~fD~ 296 (396)
T 3c0k_A 219 VENKRVLNCFSYTGGFAVSALMGG-CSQVVSVDTSQEALDIARQNVELN-KLDLSKAEFVRDDVFKLLRTYRDRGEKFDV 296 (396)
T ss_dssp CTTCEEEEESCTTCSHHHHHHHTT-CSEEEEEESCHHHHHHHHHHHHHT-TCCGGGEEEEESCHHHHHHHHHHTTCCEEE
T ss_pred hCCCeEEEeeccCCHHHHHHHHCC-CCEEEEEECCHHHHHHHHHHHHHc-CCCccceEEEECCHHHHHHHHHhcCCCCCE
Confidence 357799999999999999999986 359999999999999999998876 2101289999999876521 1468999
Q ss_pred EEecc---------ccccCCChHHHHHHHHhcccCCcEEEEEeec
Q 018740 252 VHAGA---------AIHCWSSPSTGVAEISRVLRPGGVFVGTTYI 287 (351)
Q Consensus 252 V~~~~---------vl~h~~d~~~~l~~i~~~LkpgG~li~~~~~ 287 (351)
|++.- +.++..+...++.++.+.|+|||++++++..
T Consensus 297 Ii~dpP~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 341 (396)
T 3c0k_A 297 IVMDPPKFVENKSQLMGACRGYKDINMLAIQLLNEGGILLTFSCS 341 (396)
T ss_dssp EEECCSSTTTCSSSSSCCCTHHHHHHHHHHHTEEEEEEEEEEECC
T ss_pred EEECCCCCCCChhHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCC
Confidence 99863 2233355678899999999999999987654
No 239
>2b78_A Hypothetical protein SMU.776; structure genomics, methyltransferase, caries, structural genomics, unknown function; 2.00A {Streptococcus mutans} SCOP: b.122.1.9 c.66.1.51 PDB: 3ldf_A*
Probab=99.26 E-value=9.2e-12 Score=117.81 Aligned_cols=110 Identities=14% Similarity=0.144 Sum_probs=84.6
Q ss_pred CCCCeEEEEcCccCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHhhhCCCCCCCeEEEEecCCCC-CC---CCCceee
Q 018740 176 VLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRL-PF---ASSSIDA 251 (351)
Q Consensus 176 ~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~g~~~~~i~~~~~d~~~l-p~---~~~~fD~ 251 (351)
.++.+|||+|||+|.++..+++.+. .+|+|+|+|+.+++.|++++..+ |....+++++++|+.+. +. ...+||+
T Consensus 211 ~~~~~VLDl~cGtG~~sl~la~~ga-~~V~~vD~s~~al~~A~~N~~~n-~~~~~~v~~~~~D~~~~l~~~~~~~~~fD~ 288 (385)
T 2b78_A 211 AAGKTVLNLFSYTAAFSVAAAMGGA-MATTSVDLAKRSRALSLAHFEAN-HLDMANHQLVVMDVFDYFKYARRHHLTYDI 288 (385)
T ss_dssp TBTCEEEEETCTTTHHHHHHHHTTB-SEEEEEESCTTHHHHHHHHHHHT-TCCCTTEEEEESCHHHHHHHHHHTTCCEEE
T ss_pred cCCCeEEEEeeccCHHHHHHHHCCC-CEEEEEECCHHHHHHHHHHHHHc-CCCccceEEEECCHHHHHHHHHHhCCCccE
Confidence 3577999999999999999998652 48999999999999999998877 32112899999998663 21 2458999
Q ss_pred EEecccc-----ccCCCh----HHHHHHHHhcccCCcEEEEEeec
Q 018740 252 VHAGAAI-----HCWSSP----STGVAEISRVLRPGGVFVGTTYI 287 (351)
Q Consensus 252 V~~~~vl-----~h~~d~----~~~l~~i~~~LkpgG~li~~~~~ 287 (351)
|++.-.. .+..+. ..+++++.++|+|||++++++..
T Consensus 289 Ii~DPP~~~~~~~~~~~~~~~~~~ll~~~~~~L~pgG~l~~~~~~ 333 (385)
T 2b78_A 289 IIIDPPSFARNKKEVFSVSKDYHKLIRQGLEILSENGLIIASTNA 333 (385)
T ss_dssp EEECCCCC-----CCCCHHHHHHHHHHHHHHTEEEEEEEEEEECC
T ss_pred EEECCCCCCCChhhHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCC
Confidence 9985332 233333 35678889999999999987654
No 240
>1wxx_A TT1595, hypothetical protein TTHA1280; thermus thermophillus, methyltransferase, adoMet, structural genomics; 1.80A {Thermus thermophilus} SCOP: b.122.1.9 c.66.1.51 PDB: 1wxw_A 2cww_A*
Probab=99.24 E-value=7.9e-12 Score=118.19 Aligned_cols=106 Identities=19% Similarity=0.186 Sum_probs=85.3
Q ss_pred CCCeEEEEcCccCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHhhhCCCCCCCeEEEEecCCCCCC----CCCceeeE
Q 018740 177 LGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLPF----ASSSIDAV 252 (351)
Q Consensus 177 ~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~g~~~~~i~~~~~d~~~lp~----~~~~fD~V 252 (351)
++.+|||+|||+|.++..+++.. .+|+|+|+|+.+++.|++++..+ | ..++.++++|+.+... ..++||+|
T Consensus 209 ~~~~VLDlg~G~G~~~~~la~~~--~~v~~vD~s~~~~~~a~~n~~~n-~--~~~~~~~~~d~~~~~~~~~~~~~~fD~I 283 (382)
T 1wxx_A 209 RGERALDVFSYAGGFALHLALGF--REVVAVDSSAEALRRAEENARLN-G--LGNVRVLEANAFDLLRRLEKEGERFDLV 283 (382)
T ss_dssp CEEEEEEETCTTTHHHHHHHHHE--EEEEEEESCHHHHHHHHHHHHHT-T--CTTEEEEESCHHHHHHHHHHTTCCEEEE
T ss_pred CCCeEEEeeeccCHHHHHHHHhC--CEEEEEECCHHHHHHHHHHHHHc-C--CCCceEEECCHHHHHHHHHhcCCCeeEE
Confidence 57799999999999999999884 49999999999999999998877 2 3559999999876531 25689999
Q ss_pred Eecccc---------ccCCChHHHHHHHHhcccCCcEEEEEeec
Q 018740 253 HAGAAI---------HCWSSPSTGVAEISRVLRPGGVFVGTTYI 287 (351)
Q Consensus 253 ~~~~vl---------~h~~d~~~~l~~i~~~LkpgG~li~~~~~ 287 (351)
++.--. ++..+...++.++.++|+|||.+++.+..
T Consensus 284 i~dpP~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 327 (382)
T 1wxx_A 284 VLDPPAFAKGKKDVERAYRAYKEVNLRAIKLLKEGGILATASCS 327 (382)
T ss_dssp EECCCCSCCSTTSHHHHHHHHHHHHHHHHHTEEEEEEEEEEECC
T ss_pred EECCCCCCCChhHHHHHHHHHHHHHHHHHHhcCCCCEEEEEECC
Confidence 984321 11233457899999999999999998764
No 241
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=99.24 E-value=2e-11 Score=123.71 Aligned_cols=109 Identities=17% Similarity=0.189 Sum_probs=88.8
Q ss_pred CCCeEEEEcCccCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHhhhCCCCCCCeEEEEecCCC-CCCCCCceeeEEec
Q 018740 177 LGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISR-LPFASSSIDAVHAG 255 (351)
Q Consensus 177 ~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~g~~~~~i~~~~~d~~~-lp~~~~~fD~V~~~ 255 (351)
++.+|||+|||+|.++..++..+. .+|+++|+|+.+++.+++++..+ |....+++++++|+.+ ++...++||+|++.
T Consensus 539 ~g~~VLDlg~GtG~~sl~aa~~ga-~~V~aVD~s~~al~~a~~N~~~n-gl~~~~v~~i~~D~~~~l~~~~~~fD~Ii~D 616 (703)
T 3v97_A 539 KGKDFLNLFSYTGSATVHAGLGGA-RSTTTVDMSRTYLEWAERNLRLN-GLTGRAHRLIQADCLAWLREANEQFDLIFID 616 (703)
T ss_dssp TTCEEEEESCTTCHHHHHHHHTTC-SEEEEEESCHHHHHHHHHHHHHT-TCCSTTEEEEESCHHHHHHHCCCCEEEEEEC
T ss_pred CCCcEEEeeechhHHHHHHHHCCC-CEEEEEeCCHHHHHHHHHHHHHc-CCCccceEEEecCHHHHHHhcCCCccEEEEC
Confidence 477999999999999999998764 47999999999999999999887 4423579999999976 34446789999985
Q ss_pred c-----------ccccCCChHHHHHHHHhcccCCcEEEEEeec
Q 018740 256 A-----------AIHCWSSPSTGVAEISRVLRPGGVFVGTTYI 287 (351)
Q Consensus 256 ~-----------vl~h~~d~~~~l~~i~~~LkpgG~li~~~~~ 287 (351)
- ++++..+...+++++.++|+|||++++++..
T Consensus 617 PP~f~~~~~~~~~~~~~~~~~~ll~~a~~~LkpgG~L~~s~~~ 659 (703)
T 3v97_A 617 PPTFSNSKRMEDAFDVQRDHLALMKDLKRLLRAGGTIMFSNNK 659 (703)
T ss_dssp CCSBC-------CCBHHHHHHHHHHHHHHHEEEEEEEEEEECC
T ss_pred CccccCCccchhHHHHHHHHHHHHHHHHHhcCCCcEEEEEECC
Confidence 3 2333345568899999999999999987654
No 242
>4dmg_A Putative uncharacterized protein TTHA1493; rRNA, methyltransferase, S-adenosyl-methionine, 23S ribosoma transferase; HET: SAM; 1.70A {Thermus thermophilus}
Probab=99.23 E-value=2.9e-11 Score=114.39 Aligned_cols=113 Identities=14% Similarity=0.071 Sum_probs=84.8
Q ss_pred HHHHhccCCCCCCeEEEEcCccCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHhhhCCCCCCCeEEEEecCCCC-CCC
Q 018740 167 ELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRL-PFA 245 (351)
Q Consensus 167 ~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~g~~~~~i~~~~~d~~~l-p~~ 245 (351)
..+...+. ++.+|||+|||+|.++..+++.+. .|+++|+|+.+++.+++++..+ | ....+.++|+.+. +..
T Consensus 206 ~~l~~~~~--~g~~VLDlg~GtG~~sl~~a~~ga--~V~avDis~~al~~a~~n~~~n-g---~~~~~~~~D~~~~l~~~ 277 (393)
T 4dmg_A 206 RLFEAMVR--PGERVLDVYSYVGGFALRAARKGA--YALAVDKDLEALGVLDQAALRL-G---LRVDIRHGEALPTLRGL 277 (393)
T ss_dssp HHHHTTCC--TTCEEEEESCTTTHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHHHH-T---CCCEEEESCHHHHHHTC
T ss_pred HHHHHHhc--CCCeEEEcccchhHHHHHHHHcCC--eEEEEECCHHHHHHHHHHHHHh-C---CCCcEEEccHHHHHHHh
Confidence 33444433 478999999999999999999876 6999999999999999999887 2 2345678888664 221
Q ss_pred CCceeeEEecccccc---------CCChHHHHHHHHhcccCCcEEEEEeec
Q 018740 246 SSSIDAVHAGAAIHC---------WSSPSTGVAEISRVLRPGGVFVGTTYI 287 (351)
Q Consensus 246 ~~~fD~V~~~~vl~h---------~~d~~~~l~~i~~~LkpgG~li~~~~~ 287 (351)
.+.||+|++.-.... ..+...+++.+.++|+|||.+++.+..
T Consensus 278 ~~~fD~Ii~dpP~f~~~~~~~~~~~~~~~~ll~~a~~~LkpGG~Lv~~s~s 328 (393)
T 4dmg_A 278 EGPFHHVLLDPPTLVKRPEELPAMKRHLVDLVREALRLLAEEGFLWLSSCS 328 (393)
T ss_dssp CCCEEEEEECCCCCCSSGGGHHHHHHHHHHHHHHHHHTEEEEEEEEEEECC
T ss_pred cCCCCEEEECCCcCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEECC
Confidence 344999998543211 123357889999999999999976654
No 243
>2as0_A Hypothetical protein PH1915; RNA methyltransferase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus horikoshii} SCOP: b.122.1.9 c.66.1.51
Probab=99.23 E-value=1.8e-11 Score=116.25 Aligned_cols=109 Identities=14% Similarity=0.110 Sum_probs=87.1
Q ss_pred CCCeEEEEcCccCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHhhhCCCCCCCeEEEEecCCCCCC----CCCceeeE
Q 018740 177 LGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLPF----ASSSIDAV 252 (351)
Q Consensus 177 ~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~g~~~~~i~~~~~d~~~lp~----~~~~fD~V 252 (351)
++.+|||+|||+|.++..+++.+ ..+|+|+|+|+.+++.|++++..+ |. ..++.++++|+.+... ..++||+|
T Consensus 217 ~~~~VLDl~~G~G~~~~~la~~g-~~~v~~vD~s~~~l~~a~~n~~~n-~~-~~~v~~~~~d~~~~~~~~~~~~~~fD~V 293 (396)
T 2as0_A 217 PGDRVLDVFTYTGGFAIHAAIAG-ADEVIGIDKSPRAIETAKENAKLN-GV-EDRMKFIVGSAFEEMEKLQKKGEKFDIV 293 (396)
T ss_dssp TTCEEEETTCTTTHHHHHHHHTT-CSEEEEEESCHHHHHHHHHHHHHT-TC-GGGEEEEESCHHHHHHHHHHTTCCEEEE
T ss_pred CCCeEEEecCCCCHHHHHHHHCC-CCEEEEEeCCHHHHHHHHHHHHHc-CC-CccceEEECCHHHHHHHHHhhCCCCCEE
Confidence 57899999999999999999874 348999999999999999998876 22 1289999999876531 25689999
Q ss_pred Eeccc---------cccCCChHHHHHHHHhcccCCcEEEEEeecc
Q 018740 253 HAGAA---------IHCWSSPSTGVAEISRVLRPGGVFVGTTYIV 288 (351)
Q Consensus 253 ~~~~v---------l~h~~d~~~~l~~i~~~LkpgG~li~~~~~~ 288 (351)
++.-. .++..+...++.++.++|+|||.+++.+...
T Consensus 294 i~dpP~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~~~~~~ 338 (396)
T 2as0_A 294 VLDPPAFVQHEKDLKAGLRAYFNVNFAGLNLVKDGGILVTCSCSQ 338 (396)
T ss_dssp EECCCCSCSSGGGHHHHHHHHHHHHHHHHTTEEEEEEEEEEECCT
T ss_pred EECCCCCCCCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEECCC
Confidence 98532 2222445678999999999999999887653
No 244
>1yub_A Ermam, rRNA methyltransferase; MLS antibiotics; NMR {Streptococcus pneumoniae} SCOP: c.66.1.24
Probab=99.22 E-value=8.1e-14 Score=123.85 Aligned_cols=112 Identities=12% Similarity=0.135 Sum_probs=87.7
Q ss_pred HHHHHhccCCCCCCeEEEEcCccCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHhhhCCCCCCCeEEEEecCCCCCCC
Q 018740 166 FELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLPFA 245 (351)
Q Consensus 166 ~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~g~~~~~i~~~~~d~~~lp~~ 245 (351)
.+.+.+.+...++.+|||+|||+|.++..+++.+. +|+|+|+|+.+++.+++++.. ..+++++++|+.+++++
T Consensus 18 ~~~i~~~~~~~~~~~VLDiG~G~G~~~~~l~~~~~--~v~~id~~~~~~~~a~~~~~~-----~~~v~~~~~D~~~~~~~ 90 (245)
T 1yub_A 18 LNQIIKQLNLKETDTVYEIGTGKGHLTTKLAKISK--QVTSIELDSHLFNLSSEKLKL-----NTRVTLIHQDILQFQFP 90 (245)
T ss_dssp HHHHHHHCCCCSSEEEEECSCCCSSCSHHHHHHSS--EEEESSSSCSSSSSSSCTTTT-----CSEEEECCSCCTTTTCC
T ss_pred HHHHHHhcCCCCCCEEEEEeCCCCHHHHHHHHhCC--eEEEEECCHHHHHHHHHHhcc-----CCceEEEECChhhcCcc
Confidence 45667777777788999999999999999999874 999999999999998876542 36899999999998876
Q ss_pred C-CceeeEEec-----------cccccCCChHHHH----HHHHhcccCCcEEEEEe
Q 018740 246 S-SSIDAVHAG-----------AAIHCWSSPSTGV----AEISRVLRPGGVFVGTT 285 (351)
Q Consensus 246 ~-~~fD~V~~~-----------~vl~h~~d~~~~l----~~i~~~LkpgG~li~~~ 285 (351)
+ ++| .|+++ .+++|..++...+ +.+.++|+|||.+.+..
T Consensus 91 ~~~~f-~vv~n~Py~~~~~~~~~~~~~~~~~~~~lm~q~e~a~rll~~~G~l~v~~ 145 (245)
T 1yub_A 91 NKQRY-KIVGNIPYHLSTQIIKKVVFESRASDIYLIVEEGFYKRTLDIHRTLGLLL 145 (245)
T ss_dssp CSSEE-EEEEECCSSSCHHHHHHHHHHCCCEEEEEEEESSHHHHHHCGGGSHHHHT
T ss_pred cCCCc-EEEEeCCccccHHHHHHHHhCCCCCeEEEEeeHHHHHHHhCCCCchhhhh
Confidence 4 678 56654 2234444555556 77999999999876644
No 245
>1uwv_A 23S rRNA (uracil-5-)-methyltransferase RUMA; RNA modification, iron-sulfur cluster, RNA processing; 1.95A {Escherichia coli} SCOP: b.40.4.12 c.66.1.40 PDB: 2bh2_A*
Probab=99.22 E-value=1.9e-10 Score=110.39 Aligned_cols=112 Identities=16% Similarity=0.211 Sum_probs=85.9
Q ss_pred HHHHHHhccCCCCCCeEEEEcCccCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHhhhCCCCCCCeEEEEecCCC---
Q 018740 165 EFELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISR--- 241 (351)
Q Consensus 165 ~~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~g~~~~~i~~~~~d~~~--- 241 (351)
+.+.+.+.+...++.+|||+|||+|.++..+++.+. +|+|+|+|+.+++.|++++..+ | ..++.++++|+.+
T Consensus 274 l~~~~~~~l~~~~~~~VLDlgcG~G~~~~~la~~~~--~V~gvD~s~~al~~A~~n~~~~-~--~~~v~f~~~d~~~~l~ 348 (433)
T 1uwv_A 274 MVARALEWLDVQPEDRVLDLFCGMGNFTLPLATQAA--SVVGVEGVPALVEKGQQNARLN-G--LQNVTFYHENLEEDVT 348 (433)
T ss_dssp HHHHHHHHHTCCTTCEEEEESCTTTTTHHHHHTTSS--EEEEEESCHHHHHHHHHHHHHT-T--CCSEEEEECCTTSCCS
T ss_pred HHHHHHHhhcCCCCCEEEECCCCCCHHHHHHHhhCC--EEEEEeCCHHHHHHHHHHHHHc-C--CCceEEEECCHHHHhh
Confidence 455666666666778999999999999999998854 9999999999999999998776 2 3589999999977
Q ss_pred -CCCCCCceeeEEeccccccCCChHHHHHHHHhcccCCcEEEEEe
Q 018740 242 -LPFASSSIDAVHAGAAIHCWSSPSTGVAEISRVLRPGGVFVGTT 285 (351)
Q Consensus 242 -lp~~~~~fD~V~~~~vl~h~~d~~~~l~~i~~~LkpgG~li~~~ 285 (351)
+++.+++||+|++.---.-. ..+++.+.+ ++|+++++++.
T Consensus 349 ~~~~~~~~fD~Vv~dPPr~g~---~~~~~~l~~-~~p~~ivyvsc 389 (433)
T 1uwv_A 349 KQPWAKNGFDKVLLDPARAGA---AGVMQQIIK-LEPIRIVYVSC 389 (433)
T ss_dssp SSGGGTTCCSEEEECCCTTCC---HHHHHHHHH-HCCSEEEEEES
T ss_pred hhhhhcCCCCEEEECCCCccH---HHHHHHHHh-cCCCeEEEEEC
Confidence 34566789999974322111 244555543 78999888753
No 246
>2ih2_A Modification methylase TAQI; DNA, DNA methyltransferase, target base partner, 5-methylpyr 2(1H)-ONE, base flipping; HET: 5PY 6MA NEA; 1.61A {Thermus aquaticus} SCOP: c.66.1.27 d.287.1.1 PDB: 2ibs_A* 2ibt_A* 2ih4_A* 2ih5_A* 2jg3_A* 2np6_A* 2np7_A* 1aqj_A* 1aqi_A* 2adm_A* 1g38_A*
Probab=99.21 E-value=1.1e-10 Score=111.62 Aligned_cols=119 Identities=18% Similarity=0.257 Sum_probs=91.2
Q ss_pred cCCCCCcHHHHHHHHhccCCCCCCeEEEEcCccCHHHHHHHHhC-CCCeEEEEeCCHHHHHHHHHHHhhhCCCCCCCeEE
Q 018740 156 WGGFPGPEKEFELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSG-LFSLVVALDYSENMLKQCYEFVQQESNFPKENFLL 234 (351)
Q Consensus 156 ~~~~~~~~~~~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~-~~~~v~gvD~s~~~~~~a~~~~~~~~g~~~~~i~~ 234 (351)
.+.++.+....+.+.+.+...++.+|||+|||+|.++..++++. +..+++|+|+++.+++.| .++.+
T Consensus 18 ~g~~~TP~~l~~~~~~~~~~~~~~~vLD~gcGtG~~~~~~~~~~~~~~~i~gvDi~~~~~~~a------------~~~~~ 85 (421)
T 2ih2_A 18 LGRVETPPEVVDFMVSLAEAPRGGRVLEPACAHGPFLRAFREAHGTAYRFVGVEIDPKALDLP------------PWAEG 85 (421)
T ss_dssp ---CCCCHHHHHHHHHHCCCCTTCEEEEETCTTCHHHHHHHHHHCSCSEEEEEESCTTTCCCC------------TTEEE
T ss_pred CceEeCCHHHHHHHHHhhccCCCCEEEECCCCChHHHHHHHHHhCCCCeEEEEECCHHHHHhC------------CCCcE
Confidence 34566778888888888876567799999999999999999863 456999999999988665 36889
Q ss_pred EEecCCCCCCCCCceeeEEeccccc----------cCCCh-------------------HHHHHHHHhcccCCcEEEEEe
Q 018740 235 VRADISRLPFASSSIDAVHAGAAIH----------CWSSP-------------------STGVAEISRVLRPGGVFVGTT 285 (351)
Q Consensus 235 ~~~d~~~lp~~~~~fD~V~~~~vl~----------h~~d~-------------------~~~l~~i~~~LkpgG~li~~~ 285 (351)
+++|+...+ ..++||+|+++--.. |+.+. ..+++.+.++|+|||.+++..
T Consensus 86 ~~~D~~~~~-~~~~fD~Ii~NPPy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~~~~Lk~~G~~~~i~ 164 (421)
T 2ih2_A 86 ILADFLLWE-PGEAFDLILGNPPYGIVGEASKYPIHVFKAVKDLYKKAFSTWKGKYNLYGAFLEKAVRLLKPGGVLVFVV 164 (421)
T ss_dssp EESCGGGCC-CSSCEEEEEECCCCCCBSCTTTCSBCCCHHHHHHHHHHCTTCCTTCCHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred EeCChhhcC-ccCCCCEEEECcCccCcccccccccccCHHHHHHHHHhhhcccCCccHHHHHHHHHHHHhCCCCEEEEEE
Confidence 999998765 346899999962221 12111 156889999999999999988
Q ss_pred ec
Q 018740 286 YI 287 (351)
Q Consensus 286 ~~ 287 (351)
+.
T Consensus 165 p~ 166 (421)
T 2ih2_A 165 PA 166 (421)
T ss_dssp EG
T ss_pred Ch
Confidence 86
No 247
>2okc_A Type I restriction enzyme stysji M protein; NP_813429.1, N-6 DNA methylase, type I restriction enzyme ST protein; HET: SAM; 2.20A {Bacteroides thetaiotaomicron vpi-5482} SCOP: c.66.1.45
Probab=99.20 E-value=4.7e-11 Score=115.13 Aligned_cols=129 Identities=14% Similarity=0.141 Sum_probs=101.9
Q ss_pred CCCCCcHHHHHHHHhccCCCCCCeEEEEcCccCHHHHHHHHhC-------------CCCeEEEEeCCHHHHHHHHHHHhh
Q 018740 157 GGFPGPEKEFELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSG-------------LFSLVVALDYSENMLKQCYEFVQQ 223 (351)
Q Consensus 157 ~~~~~~~~~~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~-------------~~~~v~gvD~s~~~~~~a~~~~~~ 223 (351)
+.++.|....+.+.+.+.+.++.+|||.|||+|.++..+.+.. ...+++|+|+++.+++.|+.++..
T Consensus 151 G~fyTP~~v~~~mv~~l~~~~~~~VlDpacGsG~fl~~~~~~l~~~~~~~~~~~~~~~~~i~G~Ei~~~~~~lA~~nl~l 230 (445)
T 2okc_A 151 GQYFTPRPLIQAMVDCINPQMGETVCDPACGTGGFLLTAYDYMKGQSASKEKRDFLRDKALHGVDNTPLVVTLASMNLYL 230 (445)
T ss_dssp GGGCCCHHHHHHHHHHHCCCTTCCEEETTCTTCHHHHHHHHHHHTCC-CCHHHHHHHHTTEEEEESCHHHHHHHHHHHHH
T ss_pred CcccCcHHHHHHHHHHhCCCCCCEEeccCCCcchHHHHHHHHHHHhcCCHHHHHhhcCeEEEEEeCCHHHHHHHHHHHHH
Confidence 3467788888899888888788899999999999998887642 124799999999999999998776
Q ss_pred hCCCCCCCeEEEEecCCCCCCCCCceeeEEeccccccCCC-----------------hHHHHHHHHhcccCCcEEEEEee
Q 018740 224 ESNFPKENFLLVRADISRLPFASSSIDAVHAGAAIHCWSS-----------------PSTGVAEISRVLRPGGVFVGTTY 286 (351)
Q Consensus 224 ~~g~~~~~i~~~~~d~~~lp~~~~~fD~V~~~~vl~h~~d-----------------~~~~l~~i~~~LkpgG~li~~~~ 286 (351)
. |....++.+.++|....+.. .+||+|+++-.+.+... ...+++.+.+.|+|||++.+..+
T Consensus 231 ~-g~~~~~~~i~~gD~l~~~~~-~~fD~Iv~NPPf~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~~~~Lk~gG~~a~V~p 308 (445)
T 2okc_A 231 H-GIGTDRSPIVCEDSLEKEPS-TLVDVILANPPFGTRPAGSVDINRPDFYVETKNNQLNFLQHMMLMLKTGGRAAVVLP 308 (445)
T ss_dssp T-TCCSSCCSEEECCTTTSCCS-SCEEEEEECCCSSCCCTTCCCCCCTTSSSCCSCHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred h-CCCcCCCCEeeCCCCCCccc-CCcCEEEECCCCCCcccccchhhHhhcCCCCcchHHHHHHHHHHHhccCCEEEEEEC
Confidence 5 32112677899998776643 48999999866554321 13789999999999999999887
Q ss_pred c
Q 018740 287 I 287 (351)
Q Consensus 287 ~ 287 (351)
.
T Consensus 309 ~ 309 (445)
T 2okc_A 309 D 309 (445)
T ss_dssp H
T ss_pred C
Confidence 5
No 248
>2xyq_A Putative 2'-O-methyl transferase; transferase-viral protein complex, rossman fold; HET: SAH; 2.00A {Sars coronavirus} PDB: 2xyv_A* 2xyr_A*
Probab=99.20 E-value=4.8e-11 Score=108.00 Aligned_cols=118 Identities=14% Similarity=0.004 Sum_probs=85.1
Q ss_pred cCCCCCCeEEEEcCcc------CHHHHHHHHhCC-CCeEEEEeCCHHHHHHHHHHHhhhCCCCCCCeEE-EEecCCCCCC
Q 018740 173 LKPVLGGNIIDASCGS------GLFSRIFAKSGL-FSLVVALDYSENMLKQCYEFVQQESNFPKENFLL-VRADISRLPF 244 (351)
Q Consensus 173 l~~~~~~~vLDiGcG~------G~~~~~l~~~~~-~~~v~gvD~s~~~~~~a~~~~~~~~g~~~~~i~~-~~~d~~~lp~ 244 (351)
+...++.+|||+|||+ |. ..+++..+ ..+|+|+|+|+. + .++++ +++|+.++++
T Consensus 59 l~l~~g~~VLDLGcGsg~~~GpGs--~~~a~~~~~~~~V~gvDis~~-v---------------~~v~~~i~gD~~~~~~ 120 (290)
T 2xyq_A 59 LAVPYNMRVIHFGAGSDKGVAPGT--AVLRQWLPTGTLLVDSDLNDF-V---------------SDADSTLIGDCATVHT 120 (290)
T ss_dssp CCCCTTCEEEEESCCCTTSBCHHH--HHHHHHSCTTCEEEEEESSCC-B---------------CSSSEEEESCGGGCCC
T ss_pred cCCCCCCEEEEeCCCCCCCCCcHH--HHHHHHcCCCCEEEEEECCCC-C---------------CCCEEEEECccccCCc
Confidence 4556788999999944 65 44444433 569999999987 1 25678 9999998875
Q ss_pred CCCceeeEEecccccc--------C---CChHHHHHHHHhcccCCcEEEEEeeccCCCCCcchHHHHHHHHHhhccCCcc
Q 018740 245 ASSSIDAVHAGAAIHC--------W---SSPSTGVAEISRVLRPGGVFVGTTYIVDGPFNLIPFSRLLRQNMMQISGSYT 313 (351)
Q Consensus 245 ~~~~fD~V~~~~vl~h--------~---~d~~~~l~~i~~~LkpgG~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 313 (351)
+ ++||+|+++...+. . .....+++++.++|||||.+++..+...
T Consensus 121 ~-~~fD~Vvsn~~~~~~g~~~~d~~~~~~l~~~~l~~a~r~LkpGG~~v~~~~~~~------------------------ 175 (290)
T 2xyq_A 121 A-NKWDLIISDMYDPRTKHVTKENDSKEGFFTYLCGFIKQKLALGGSIAVKITEHS------------------------ 175 (290)
T ss_dssp S-SCEEEEEECCCCCC---CCSCCCCCCTHHHHHHHHHHHHEEEEEEEEEEECSSS------------------------
T ss_pred c-CcccEEEEcCCccccccccccccchHHHHHHHHHHHHHhcCCCcEEEEEEeccC------------------------
Confidence 4 68999998643221 1 1124789999999999999999654321
Q ss_pred CCCHHHHHHHHHHCCCeEEEEE
Q 018740 314 FLSEREIEDLCRACGLVDFKCT 335 (351)
Q Consensus 314 ~~s~~~l~~ll~~aGf~~v~~~ 335 (351)
...++.+++++.||..++..
T Consensus 176 --~~~~l~~~l~~~GF~~v~~~ 195 (290)
T 2xyq_A 176 --WNADLYKLMGHFSWWTAFVT 195 (290)
T ss_dssp --CCHHHHHHHTTEEEEEEEEE
T ss_pred --CHHHHHHHHHHcCCcEEEEE
Confidence 12478888999999877654
No 249
>2h1r_A Dimethyladenosine transferase, putative; SGC toronto dimethyladenosine transferase, structural genomics, structural genomics consortium; 1.89A {Plasmodium falciparum}
Probab=99.19 E-value=5.5e-11 Score=108.62 Aligned_cols=109 Identities=17% Similarity=0.204 Sum_probs=80.6
Q ss_pred HHHHHHHHhccCCCCCCeEEEEcCccCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHhhhCCCCCCCeEEEEecCCCC
Q 018740 163 EKEFELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRL 242 (351)
Q Consensus 163 ~~~~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~g~~~~~i~~~~~d~~~l 242 (351)
....+.+.+.+...++.+|||||||+|.++..+++.+. +|+|+|+|+.+++.+++++... + .+++.++.+|+.++
T Consensus 28 ~~i~~~i~~~~~~~~~~~VLDiG~G~G~lt~~La~~~~--~v~~vDi~~~~~~~a~~~~~~~-~--~~~v~~~~~D~~~~ 102 (299)
T 2h1r_A 28 PGILDKIIYAAKIKSSDIVLEIGCGTGNLTVKLLPLAK--KVITIDIDSRMISEVKKRCLYE-G--YNNLEVYEGDAIKT 102 (299)
T ss_dssp HHHHHHHHHHHCCCTTCEEEEECCTTSTTHHHHTTTSS--EEEEECSCHHHHHHHHHHHHHT-T--CCCEEC----CCSS
T ss_pred HHHHHHHHHhcCCCCcCEEEEEcCcCcHHHHHHHhcCC--EEEEEECCHHHHHHHHHHHHHc-C--CCceEEEECchhhC
Confidence 34456666777777788999999999999999998865 9999999999999999988654 1 36899999999988
Q ss_pred CCCCCceeeEEeccccccCCChH--HHH---------------HHHHhcccCCc
Q 018740 243 PFASSSIDAVHAGAAIHCWSSPS--TGV---------------AEISRVLRPGG 279 (351)
Q Consensus 243 p~~~~~fD~V~~~~vl~h~~d~~--~~l---------------~~i~~~LkpgG 279 (351)
++ ++||+|+++...+ +..+. .++ +.+.|+++++|
T Consensus 103 ~~--~~~D~Vv~n~py~-~~~~~~~~ll~~~~~~~~~~l~~Q~e~a~rlla~~G 153 (299)
T 2h1r_A 103 VF--PKFDVCTANIPYK-ISSPLIFKLISHRPLFKCAVLMFQKEFAERMLANVG 153 (299)
T ss_dssp CC--CCCSEEEEECCGG-GHHHHHHHHHHCSSCCSEEEEEEEHHHHHHHTCCTT
T ss_pred Cc--ccCCEEEEcCCcc-cccHHHHHHHhcCCccceeeehHHHHHHHHHhcCCC
Confidence 75 3799999864433 33332 333 44668888877
No 250
>3gru_A Dimethyladenosine transferase; rossman fold, ribosomal assem adenosyl-L-methionine, rRNA, methyltransferase, RNA-binding processing; HET: AMP; 1.60A {Methanocaldococcus jannaschii} PDB: 3grr_A* 3grv_A* 3gry_A* 3fyd_A 3fyc_A*
Probab=99.19 E-value=8.8e-11 Score=106.66 Aligned_cols=88 Identities=10% Similarity=0.152 Sum_probs=76.8
Q ss_pred HHHHHHHHhccCCCCCCeEEEEcCccCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHhhhCCCCCCCeEEEEecCCCC
Q 018740 163 EKEFELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRL 242 (351)
Q Consensus 163 ~~~~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~g~~~~~i~~~~~d~~~l 242 (351)
....+.+.+.+...++.+|||||||+|.++..+++.+. +|+|+|+++.+++.+++++.. .++++++++|+.++
T Consensus 36 ~~i~~~Iv~~l~~~~~~~VLEIG~G~G~lT~~La~~~~--~V~aVEid~~li~~a~~~~~~-----~~~v~vi~gD~l~~ 108 (295)
T 3gru_A 36 KNFVNKAVESANLTKDDVVLEIGLGKGILTEELAKNAK--KVYVIEIDKSLEPYANKLKEL-----YNNIEIIWGDALKV 108 (295)
T ss_dssp HHHHHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHHSS--EEEEEESCGGGHHHHHHHHHH-----CSSEEEEESCTTTS
T ss_pred HHHHHHHHHhcCCCCcCEEEEECCCchHHHHHHHhcCC--EEEEEECCHHHHHHHHHHhcc-----CCCeEEEECchhhC
Confidence 44566777778877889999999999999999999865 999999999999999998773 47899999999999
Q ss_pred CCCCCceeeEEeccc
Q 018740 243 PFASSSIDAVHAGAA 257 (351)
Q Consensus 243 p~~~~~fD~V~~~~v 257 (351)
++++.+||+|+++..
T Consensus 109 ~~~~~~fD~Iv~NlP 123 (295)
T 3gru_A 109 DLNKLDFNKVVANLP 123 (295)
T ss_dssp CGGGSCCSEEEEECC
T ss_pred CcccCCccEEEEeCc
Confidence 888888999997744
No 251
>2p41_A Type II methyltransferase; vizier, viral enzymes involved in replication, dengue virus methyltransferase, structural genomics; HET: G1G SAH CIT; 1.80A {Dengue virus 2} SCOP: c.66.1.25 PDB: 2p1d_A* 1l9k_A* 2p3o_A* 2p3q_A* 2p40_A* 2p3l_A* 1r6a_A*
Probab=99.19 E-value=7.7e-12 Score=114.48 Aligned_cols=104 Identities=13% Similarity=0.073 Sum_probs=75.4
Q ss_pred CCCCCeEEEEcCccCHHHHHHHHhCCCCeEEEEeC----CHHHHHHHHHHHhhhCCCCCCCeEEEEe-cCCCCCCCCCce
Q 018740 175 PVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDY----SENMLKQCYEFVQQESNFPKENFLLVRA-DISRLPFASSSI 249 (351)
Q Consensus 175 ~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~----s~~~~~~a~~~~~~~~g~~~~~i~~~~~-d~~~lp~~~~~f 249 (351)
..++.+|||+|||+|.++..+++. . +|+|+|+ ++.+++... .. ....+++.++++ |+..++ .++|
T Consensus 80 ~~~g~~VLDlGcG~G~~s~~la~~-~--~V~gvD~~~~~~~~~~~~~~----~~-~~~~~~v~~~~~~D~~~l~--~~~f 149 (305)
T 2p41_A 80 VTPEGKVVDLGCGRGGWSYYCGGL-K--NVREVKGLTKGGPGHEEPIP----MS-TYGWNLVRLQSGVDVFFIP--PERC 149 (305)
T ss_dssp SCCCEEEEEETCTTSHHHHHHHTS-T--TEEEEEEECCCSTTSCCCCC----CC-STTGGGEEEECSCCTTTSC--CCCC
T ss_pred CCCCCEEEEEcCCCCHHHHHHHhc-C--CEEEEeccccCchhHHHHHH----hh-hcCCCCeEEEeccccccCC--cCCC
Confidence 345789999999999999999988 2 8999999 554432111 00 011257999999 888775 5689
Q ss_pred eeEEeccccc---cCCChH---HHHHHHHhcccCCcEEEEEeecc
Q 018740 250 DAVHAGAAIH---CWSSPS---TGVAEISRVLRPGGVFVGTTYIV 288 (351)
Q Consensus 250 D~V~~~~vl~---h~~d~~---~~l~~i~~~LkpgG~li~~~~~~ 288 (351)
|+|+|..+++ +..|.. .+|.++.++|||||.+++..+..
T Consensus 150 D~V~sd~~~~~g~~~~d~~~~l~~L~~~~~~LkpGG~~v~kv~~~ 194 (305)
T 2p41_A 150 DTLLCDIGESSPNPTVEAGRTLRVLNLVENWLSNNTQFCVKVLNP 194 (305)
T ss_dssp SEEEECCCCCCSSHHHHHHHHHHHHHHHHHHCCTTCEEEEEESCC
T ss_pred CEEEECCccccCcchhhHHHHHHHHHHHHHHhCCCCEEEEEeCCC
Confidence 9999977653 222222 57899999999999999866543
No 252
>2yx1_A Hypothetical protein MJ0883; methyl transferase, tRNA modification enzyme, transferase; HET: SFG; 2.20A {Methanocaldococcus jannaschii} PDB: 2zzn_A* 3ay0_A* 2zzm_A*
Probab=99.16 E-value=1.6e-10 Score=107.24 Aligned_cols=100 Identities=15% Similarity=0.183 Sum_probs=82.9
Q ss_pred CCCeEEEEcCccCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHhhhCCCCCCCeEEEEecCCCCCCCCCceeeEEecc
Q 018740 177 LGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLPFASSSIDAVHAGA 256 (351)
Q Consensus 177 ~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~g~~~~~i~~~~~d~~~lp~~~~~fD~V~~~~ 256 (351)
++.+|||+|||+|.++.. ++. ..+|+|+|+|+.+++.+++++..+ +. ..++.++++|+.+.. ++||+|++.-
T Consensus 195 ~~~~VLDlg~G~G~~~l~-a~~--~~~V~~vD~s~~ai~~a~~n~~~n-~l-~~~v~~~~~D~~~~~---~~fD~Vi~dp 266 (336)
T 2yx1_A 195 LNDVVVDMFAGVGPFSIA-CKN--AKKIYAIDINPHAIELLKKNIKLN-KL-EHKIIPILSDVREVD---VKGNRVIMNL 266 (336)
T ss_dssp TTCEEEETTCTTSHHHHH-TTT--SSEEEEEESCHHHHHHHHHHHHHT-TC-TTTEEEEESCGGGCC---CCEEEEEECC
T ss_pred CCCEEEEccCccCHHHHh-ccC--CCEEEEEECCHHHHHHHHHHHHHc-CC-CCcEEEEECChHHhc---CCCcEEEECC
Confidence 478999999999999999 773 459999999999999999998876 22 257999999998875 7899999853
Q ss_pred ccccCCChHHHHHHHHhcccCCcEEEEEeecc
Q 018740 257 AIHCWSSPSTGVAEISRVLRPGGVFVGTTYIV 288 (351)
Q Consensus 257 vl~h~~d~~~~l~~i~~~LkpgG~li~~~~~~ 288 (351)
.. ....++.++.++|+|||.+++.+...
T Consensus 267 P~----~~~~~l~~~~~~L~~gG~l~~~~~~~ 294 (336)
T 2yx1_A 267 PK----FAHKFIDKALDIVEEGGVIHYYTIGK 294 (336)
T ss_dssp TT----TGGGGHHHHHHHEEEEEEEEEEEEES
T ss_pred cH----hHHHHHHHHHHHcCCCCEEEEEEeec
Confidence 21 12378999999999999999987753
No 253
>2jjq_A Uncharacterized RNA methyltransferase pyrab10780; metal-binding, tRNA methyltransferase, S-adenosyl-L-methionine, iron, 4Fe-4S, iron-sulfur; HET: SAH; 1.8A {Pyrococcus abyssi} PDB: 2vs1_A*
Probab=99.13 E-value=6.5e-10 Score=106.25 Aligned_cols=99 Identities=21% Similarity=0.224 Sum_probs=78.1
Q ss_pred CCCCeEEEEcCccCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHhhhCCCCCCCeEEEEecCCCCCCCCCceeeEEec
Q 018740 176 VLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLPFASSSIDAVHAG 255 (351)
Q Consensus 176 ~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~g~~~~~i~~~~~d~~~lp~~~~~fD~V~~~ 255 (351)
.++.+|||+|||+|.++..+++.+. +|+|+|+|+.+++.|++++..+ | .. ++++.+|+.++... +||+|++.
T Consensus 289 ~~~~~VLDlgcG~G~~sl~la~~~~--~V~gvD~s~~ai~~A~~n~~~n-g--l~-v~~~~~d~~~~~~~--~fD~Vv~d 360 (425)
T 2jjq_A 289 VEGEKILDMYSGVGTFGIYLAKRGF--NVKGFDSNEFAIEMARRNVEIN-N--VD-AEFEVASDREVSVK--GFDTVIVD 360 (425)
T ss_dssp CCSSEEEEETCTTTHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHHHH-T--CC-EEEEECCTTTCCCT--TCSEEEEC
T ss_pred CCCCEEEEeeccchHHHHHHHHcCC--EEEEEECCHHHHHHHHHHHHHc-C--Cc-EEEEECChHHcCcc--CCCEEEEc
Confidence 4477999999999999999999865 9999999999999999998876 2 23 99999999887532 89999985
Q ss_pred cccccCCChHHHHHHHHhcccCCcEEEEEe
Q 018740 256 AAIHCWSSPSTGVAEISRVLRPGGVFVGTT 285 (351)
Q Consensus 256 ~vl~h~~d~~~~l~~i~~~LkpgG~li~~~ 285 (351)
-.-.. -...+++.+. .|+|+|+++++.
T Consensus 361 PPr~g--~~~~~~~~l~-~l~p~givyvsc 387 (425)
T 2jjq_A 361 PPRAG--LHPRLVKRLN-REKPGVIVYVSC 387 (425)
T ss_dssp CCTTC--SCHHHHHHHH-HHCCSEEEEEES
T ss_pred CCccc--hHHHHHHHHH-hcCCCcEEEEEC
Confidence 43211 1124556554 599999999864
No 254
>3k0b_A Predicted N6-adenine-specific DNA methylase; methylase,PF01170, putative RNA methylase, PSI,MCSG, structu genomics; 1.50A {Listeria monocytogenes str}
Probab=99.13 E-value=2.7e-10 Score=107.78 Aligned_cols=123 Identities=11% Similarity=0.020 Sum_probs=92.9
Q ss_pred cHHHHHHHHhccCCCCCCeEEEEcCccCHHHHHHHHhCCC--------------------------------------Ce
Q 018740 162 PEKEFELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLF--------------------------------------SL 203 (351)
Q Consensus 162 ~~~~~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~--------------------------------------~~ 203 (351)
.+.++..+.......++..|||.+||+|.++..++..+.+ .+
T Consensus 186 ~e~lAa~ll~l~~~~~~~~vlDp~CGSGt~~ieaa~~~~~~apg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~ 265 (393)
T 3k0b_A 186 KETMAAALVLLTSWHPDRPFYDPVCGSGTIPIEAALIGQNIAPGFNREFVSETWDWMPKQVWADARQEAEDLANYDQPLN 265 (393)
T ss_dssp CHHHHHHHHHHSCCCTTSCEEETTCTTSHHHHHHHHHHTTCCTTTTSCCGGGGCTTSCHHHHHHHHHHHHHHCCTTCCCC
T ss_pred cHHHHHHHHHHhCCCCCCeEEEcCCCCCHHHHHHHHHhcCcCCCccccchhhccccCCHHHHHHHHHHHHHhhcccCCce
Confidence 3556667777777777889999999999999888775432 46
Q ss_pred EEEEeCCHHHHHHHHHHHhhhCCCCCCCeEEEEecCCCCCCCCCceeeEEeccccc-cCC---ChHHHHHHHHhcccC--
Q 018740 204 VVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLPFASSSIDAVHAGAAIH-CWS---SPSTGVAEISRVLRP-- 277 (351)
Q Consensus 204 v~gvD~s~~~~~~a~~~~~~~~g~~~~~i~~~~~d~~~lp~~~~~fD~V~~~~vl~-h~~---d~~~~l~~i~~~Lkp-- 277 (351)
|+|+|+|+.|++.|++++... |. ..++.+.++|+.+++.+ .+||+|+++--.. .+. +...+.+++.+.|++
T Consensus 266 V~GvDid~~al~~Ar~Na~~~-gl-~~~I~~~~~D~~~~~~~-~~fD~Iv~NPPYg~rl~~~~~l~~ly~~lg~~lk~~~ 342 (393)
T 3k0b_A 266 IIGGDIDARLIEIAKQNAVEA-GL-GDLITFRQLQVADFQTE-DEYGVVVANPPYGERLEDEEAVRQLYREMGIVYKRMP 342 (393)
T ss_dssp EEEEESCHHHHHHHHHHHHHT-TC-TTCSEEEECCGGGCCCC-CCSCEEEECCCCCCSHHHHHHHHHHHHHHHHHHHTCT
T ss_pred EEEEECCHHHHHHHHHHHHHc-CC-CCceEEEECChHhCCCC-CCCCEEEECCCCccccCCchhHHHHHHHHHHHHhcCC
Confidence 999999999999999998876 32 34699999999998754 5899999984321 121 233556666667766
Q ss_pred CcEEEEEeec
Q 018740 278 GGVFVGTTYI 287 (351)
Q Consensus 278 gG~li~~~~~ 287 (351)
||.+++.+..
T Consensus 343 g~~~~iit~~ 352 (393)
T 3k0b_A 343 TWSVYVLTSY 352 (393)
T ss_dssp TCEEEEEECC
T ss_pred CCEEEEEECC
Confidence 9998887765
No 255
>3b5i_A S-adenosyl-L-methionine:salicylic acid carboxyl methyltransferase-like protein; sabath family, indole-3-acetic acid, S-AD methionine; HET: SAH; 2.75A {Arabidopsis thaliana}
Probab=99.10 E-value=3.2e-09 Score=99.29 Aligned_cols=157 Identities=11% Similarity=0.005 Sum_probs=102.5
Q ss_pred CCeEEEEcCccCHHHHHHHH--------hC-------CCCeEEEEeCCHHHHHHHHHHHhhhCC----------C--CCC
Q 018740 178 GGNIIDASCGSGLFSRIFAK--------SG-------LFSLVVALDYSENMLKQCYEFVQQESN----------F--PKE 230 (351)
Q Consensus 178 ~~~vLDiGcG~G~~~~~l~~--------~~-------~~~~v~gvD~s~~~~~~a~~~~~~~~g----------~--~~~ 230 (351)
.-+|+|+|||+|.++..+.. .. |..+|+.-|+-.+.....-+.+..... . ...
T Consensus 53 ~~~IaDlGCssG~Nt~~~v~~ii~~i~~~~~~~~~~~pe~~v~~nDLp~NDFn~lF~~L~~~~~~~~~~~~~~~~~~~~~ 132 (374)
T 3b5i_A 53 PFTAVDLGCSSGANTVHIIDFIVKHISKRFDAAGIDPPEFTAFFSDLPSNDFNTLFQLLPPLVSNTCMEECLAADGNRSY 132 (374)
T ss_dssp CEEEEEETCCSSHHHHHHHHHHHHHHHHHHHHTTCCCCCEEEEEEECTTSCHHHHHHHSCCBCCCC--CCC---CCCBCS
T ss_pred ceEEEecCCCCChhHHHHHHHHHHHHHHHHhhcCCCCCceeEEecCCCccchHHHHhhhhhhhhhcchhhhccccCCCce
Confidence 46899999999998877622 21 567899999877766555444433200 0 001
Q ss_pred CeEEEEecCCCCCCCCCceeeEEeccccccCCC--------------------------------------hHHHHHHHH
Q 018740 231 NFLLVRADISRLPFASSSIDAVHAGAAIHCWSS--------------------------------------PSTGVAEIS 272 (351)
Q Consensus 231 ~i~~~~~d~~~lp~~~~~fD~V~~~~vl~h~~d--------------------------------------~~~~l~~i~ 272 (351)
-+..+.+.+..-.+++++||+|+++.+|||+.+ ...+|+..+
T Consensus 133 f~~gvpgSFy~rlfP~~S~d~v~Ss~aLHWls~~p~~l~~~~~~~~nkg~i~~~~~~~~v~~ay~~Qf~~D~~~fL~~ra 212 (374)
T 3b5i_A 133 FVAGVPGSFYRRLFPARTIDFFHSAFSLHWLSQVPESVTDRRSAAYNRGRVFIHGAGEKTTTAYKRQFQADLAEFLRARA 212 (374)
T ss_dssp EEEEEESCTTSCCSCTTCEEEEEEESCTTBCSSCCGGGGCTTSTTCCTTTSSSSSCCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEecChhhhcccCCCcceEEEEecceeeeeccCchhhhccccccccCCceEeCCCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 122233444445678999999999999999873 234688889
Q ss_pred hcccCCcEEEEEeeccCCCCCcc---------hHHHHHHHHH-----------hhccCCccCCCHHHHHHHHH-HCCCeE
Q 018740 273 RVLRPGGVFVGTTYIVDGPFNLI---------PFSRLLRQNM-----------MQISGSYTFLSEREIEDLCR-ACGLVD 331 (351)
Q Consensus 273 ~~LkpgG~li~~~~~~~~~~~~~---------~~~~~~~~~~-----------~~~~~~~~~~s~~~l~~ll~-~aGf~~ 331 (351)
+.|+|||+++++........... ..+...+..+ ....-.+.+.+.+++..+++ ..||.+
T Consensus 213 ~eL~pGG~mvl~~~gr~~~~~~~~~~~~~~~~~~l~~al~~l~~eG~i~~e~~d~f~~P~y~ps~~E~~~~l~~~~~F~I 292 (374)
T 3b5i_A 213 AEVKRGGAMFLVCLGRTSVDPTDQGGAGLLFGTHFQDAWDDLVREGLVAAEKRDGFNIPVYAPSLQDFKEVVDANGSFAI 292 (374)
T ss_dssp HHEEEEEEEEEEEEECCCSSTTCCHHHHHHHSSHHHHHHHHTTSSSSSCHHHHSSCCCCBCCCCHHHHHHHHHHHCSEEE
T ss_pred HHhCCCCEEEEEEecCCCCccccccchhhHHHHHHHHHHHHHHHhCCcchhhcccCCccccCCCHHHHHHHHHhcCCcEE
Confidence 99999999999999875432211 1111111111 00122456789999999998 599987
Q ss_pred EEE
Q 018740 332 FKC 334 (351)
Q Consensus 332 v~~ 334 (351)
.+.
T Consensus 293 ~~l 295 (374)
T 3b5i_A 293 DKL 295 (374)
T ss_dssp EEE
T ss_pred EEE
Confidence 664
No 256
>3ldg_A Putative uncharacterized protein SMU.472; YPSC, methyltransferase, transferase; HET: SAH; 1.96A {Streptococcus mutans}
Probab=99.06 E-value=1.2e-09 Score=102.86 Aligned_cols=122 Identities=12% Similarity=0.074 Sum_probs=93.6
Q ss_pred HHHHHHHHhccCCCCCCeEEEEcCccCHHHHHHHHhCCC--------------------------------------CeE
Q 018740 163 EKEFELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLF--------------------------------------SLV 204 (351)
Q Consensus 163 ~~~~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~--------------------------------------~~v 204 (351)
+.++..+.......++..+||.+||+|.++..++..+.+ .++
T Consensus 180 e~LAaall~l~~~~~~~~llDp~CGSGt~lIEAa~~a~~iapg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~v 259 (384)
T 3ldg_A 180 ENMAAAIILLSNWFPDKPFVDPTCGSGTFCIEAAMIGMNIAPGFNRDFAFEEWPWVDEALVTRVRNEADEQADYDIQLDI 259 (384)
T ss_dssp HHHHHHHHHHTTCCTTSCEEETTCTTSHHHHHHHHHHTTCCTTTTCCCGGGGCTTSCHHHHHHHHHHHHHHCCTTCCCCE
T ss_pred HHHHHHHHHHhCCCCCCeEEEeCCcCCHHHHHHHHHhcCcCCCccccchhhhhccCCHHHHHHHHHHHHHhhhccCCceE
Confidence 555666777777777889999999999999888765432 369
Q ss_pred EEEeCCHHHHHHHHHHHhhhCCCCCCCeEEEEecCCCCCCCCCceeeEEeccccc-cCCC---hHHHHHHHHhcccC--C
Q 018740 205 VALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLPFASSSIDAVHAGAAIH-CWSS---PSTGVAEISRVLRP--G 278 (351)
Q Consensus 205 ~gvD~s~~~~~~a~~~~~~~~g~~~~~i~~~~~d~~~lp~~~~~fD~V~~~~vl~-h~~d---~~~~l~~i~~~Lkp--g 278 (351)
+|+|+++.|++.|++++... |. ...+.+.++|+.+++.+ .+||+|+++--.. .+.+ ...+.+++.+.||+ |
T Consensus 260 ~GvDid~~al~~Ar~Na~~~-gl-~~~I~~~~~D~~~l~~~-~~fD~Iv~NPPYG~rl~~~~~l~~ly~~lg~~lk~~~g 336 (384)
T 3ldg_A 260 SGFDFDGRMVEIARKNAREV-GL-EDVVKLKQMRLQDFKTN-KINGVLISNPPYGERLLDDKAVDILYNEMGETFAPLKT 336 (384)
T ss_dssp EEEESCHHHHHHHHHHHHHT-TC-TTTEEEEECCGGGCCCC-CCSCEEEECCCCTTTTSCHHHHHHHHHHHHHHHTTCTT
T ss_pred EEEECCHHHHHHHHHHHHHc-CC-CCceEEEECChHHCCcc-CCcCEEEECCchhhccCCHHHHHHHHHHHHHHHhhCCC
Confidence 99999999999999999876 32 34699999999998764 4899999984332 2322 34666777777776 9
Q ss_pred cEEEEEeec
Q 018740 279 GVFVGTTYI 287 (351)
Q Consensus 279 G~li~~~~~ 287 (351)
|.+++.+..
T Consensus 337 ~~~~iit~~ 345 (384)
T 3ldg_A 337 WSQFILTND 345 (384)
T ss_dssp SEEEEEESC
T ss_pred cEEEEEECC
Confidence 999887764
No 257
>3tqs_A Ribosomal RNA small subunit methyltransferase A; protein synthesis; 1.98A {Coxiella burnetii} SCOP: c.66.1.0
Probab=99.06 E-value=4.9e-10 Score=99.75 Aligned_cols=85 Identities=11% Similarity=0.196 Sum_probs=71.0
Q ss_pred HHHHHHHHhccCCCCCCeEEEEcCccCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHhhhCCCCCCCeEEEEecCCCC
Q 018740 163 EKEFELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRL 242 (351)
Q Consensus 163 ~~~~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~g~~~~~i~~~~~d~~~l 242 (351)
....+.+.+.+...++.+|||||||+|.++..+++.+. +|+|+|+++.|++.+++++.. ..+++++++|+.++
T Consensus 15 ~~i~~~iv~~~~~~~~~~VLEIG~G~G~lt~~La~~~~--~V~avEid~~~~~~~~~~~~~-----~~~v~~i~~D~~~~ 87 (255)
T 3tqs_A 15 SFVLQKIVSAIHPQKTDTLVEIGPGRGALTDYLLTECD--NLALVEIDRDLVAFLQKKYNQ-----QKNITIYQNDALQF 87 (255)
T ss_dssp HHHHHHHHHHHCCCTTCEEEEECCTTTTTHHHHTTTSS--EEEEEECCHHHHHHHHHHHTT-----CTTEEEEESCTTTC
T ss_pred HHHHHHHHHhcCCCCcCEEEEEcccccHHHHHHHHhCC--EEEEEECCHHHHHHHHHHHhh-----CCCcEEEEcchHhC
Confidence 44566777888888889999999999999999999875 999999999999999998754 36899999999998
Q ss_pred CCCC----CceeeEEec
Q 018740 243 PFAS----SSIDAVHAG 255 (351)
Q Consensus 243 p~~~----~~fD~V~~~ 255 (351)
++++ +.|| |+++
T Consensus 88 ~~~~~~~~~~~~-vv~N 103 (255)
T 3tqs_A 88 DFSSVKTDKPLR-VVGN 103 (255)
T ss_dssp CGGGSCCSSCEE-EEEE
T ss_pred CHHHhccCCCeE-EEec
Confidence 7643 4688 5543
No 258
>3ldu_A Putative methylase; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE GTP; 1.70A {Clostridium difficile}
Probab=99.06 E-value=1.2e-09 Score=103.17 Aligned_cols=123 Identities=15% Similarity=0.067 Sum_probs=94.4
Q ss_pred cHHHHHHHHhccCCCCCCeEEEEcCccCHHHHHHHHhCCC--------------------------------------Ce
Q 018740 162 PEKEFELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLF--------------------------------------SL 203 (351)
Q Consensus 162 ~~~~~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~--------------------------------------~~ 203 (351)
.+.++..+.......++.+|||++||+|.++..++..+.. .+
T Consensus 180 ~e~lAa~ll~~~~~~~~~~vlDp~CGSGt~lieaa~~~~~~apg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~ 259 (385)
T 3ldu_A 180 RETLAAGLIYLTPWKAGRVLVDPMCGSGTILIEAAMIGINMAPGLNREFISEKWRTLDKKIWWDVRKDAFNKIDNESKFK 259 (385)
T ss_dssp CHHHHHHHHHTSCCCTTSCEEETTCTTCHHHHHHHHHHTTCCTTTTSCCGGGGCTTSCHHHHHHHHHHHHHHSCCSCCCC
T ss_pred cHHHHHHHHHhhCCCCCCeEEEcCCCCCHHHHHHHHHHhhhCCCcccccchhhcccCCHHHHHHHHHHHHHHhhccCCce
Confidence 3455667777777777889999999999999988776421 47
Q ss_pred EEEEeCCHHHHHHHHHHHhhhCCCCCCCeEEEEecCCCCCCCCCceeeEEeccccc-cCC---ChHHHHHHHHhcccC--
Q 018740 204 VVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLPFASSSIDAVHAGAAIH-CWS---SPSTGVAEISRVLRP-- 277 (351)
Q Consensus 204 v~gvD~s~~~~~~a~~~~~~~~g~~~~~i~~~~~d~~~lp~~~~~fD~V~~~~vl~-h~~---d~~~~l~~i~~~Lkp-- 277 (351)
|+|+|+++.+++.|++++... |. ..++.+.++|+.+++.+ .+||+|+++--.. .+. +...+.+++.+.|++
T Consensus 260 V~GvDid~~ai~~Ar~Na~~~-gl-~~~i~~~~~D~~~l~~~-~~~D~Iv~NPPyg~rl~~~~~l~~ly~~lg~~lk~~~ 336 (385)
T 3ldu_A 260 IYGYDIDEESIDIARENAEIA-GV-DEYIEFNVGDATQFKSE-DEFGFIITNPPYGERLEDKDSVKQLYKELGYAFRKLK 336 (385)
T ss_dssp EEEEESCHHHHHHHHHHHHHH-TC-GGGEEEEECCGGGCCCS-CBSCEEEECCCCCCSHHHHHHHHHHHHHHHHHHHTSB
T ss_pred EEEEECCHHHHHHHHHHHHHc-CC-CCceEEEECChhhcCcC-CCCcEEEECCCCcCccCCHHHHHHHHHHHHHHHhhCC
Confidence 999999999999999998877 22 24799999999998754 5899999975532 222 234667777777776
Q ss_pred CcEEEEEeec
Q 018740 278 GGVFVGTTYI 287 (351)
Q Consensus 278 gG~li~~~~~ 287 (351)
||.+++.+..
T Consensus 337 g~~~~iit~~ 346 (385)
T 3ldu_A 337 NWSYYLITSY 346 (385)
T ss_dssp SCEEEEEESC
T ss_pred CCEEEEEECC
Confidence 8888887664
No 259
>2b9e_A NOL1/NOP2/SUN domain family, member 5 isoform 2; methytransferase, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.65A {Homo sapiens} SCOP: c.66.1.38
Probab=99.05 E-value=1.3e-09 Score=99.80 Aligned_cols=117 Identities=14% Similarity=0.075 Sum_probs=85.9
Q ss_pred HHHhccCCCCCCeEEEEcCccCHHHHHHHHh-CCCCeEEEEeCCHHHHHHHHHHHhhhCCCCCCCeEEEEecCCCCCCCC
Q 018740 168 LMKGYLKPVLGGNIIDASCGSGLFSRIFAKS-GLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLPFAS 246 (351)
Q Consensus 168 ~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~-~~~~~v~gvD~s~~~~~~a~~~~~~~~g~~~~~i~~~~~d~~~lp~~~ 246 (351)
.+...+...++.+|||+|||+|..+..+++. +...+|+++|+++.+++.++++++.. | ..++.++.+|+.+++...
T Consensus 93 l~~~~l~~~~g~~VLDlcaG~G~kt~~la~~~~~~g~V~a~D~~~~~l~~~~~n~~r~-g--~~~v~~~~~D~~~~~~~~ 169 (309)
T 2b9e_A 93 LPAMLLDPPPGSHVIDACAAPGNKTSHLAALLKNQGKIFAFDLDAKRLASMATLLARA-G--VSCCELAEEDFLAVSPSD 169 (309)
T ss_dssp HHHHHHCCCTTCEEEESSCTTCHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHT-T--CCSEEEEECCGGGSCTTC
T ss_pred HHHHHhCCCCCCEEEEeCCChhHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHc-C--CCeEEEEeCChHhcCccc
Confidence 3445566777899999999999999999886 33469999999999999999999876 2 368999999998875332
Q ss_pred ---CceeeEEec------cccccCCC-----------h-------HHHHHHHHhcccCCcEEEEEeecc
Q 018740 247 ---SSIDAVHAG------AAIHCWSS-----------P-------STGVAEISRVLRPGGVFVGTTYIV 288 (351)
Q Consensus 247 ---~~fD~V~~~------~vl~h~~d-----------~-------~~~l~~i~~~LkpgG~li~~~~~~ 288 (351)
++||.|++. +++..-+| . ..+|+.+.++|+ ||+++.++-..
T Consensus 170 ~~~~~fD~Vl~D~PcSg~G~~~r~pd~~~~~~~~~~~~~~l~~~Q~~iL~~a~~~l~-gG~lvYsTCs~ 237 (309)
T 2b9e_A 170 PRYHEVHYILLDPSCSGSGMPSRQLEEPGAGTPSPVRLHALAGFQQRALCHALTFPS-LQRLVYSTCSL 237 (309)
T ss_dssp GGGTTEEEEEECCCCCC------------------CCHHHHHHHHHHHHHHHTTCTT-CCEEEEEESCC
T ss_pred cccCCCCEEEEcCCcCCCCCCccCCChhhhccCCHHHHHHHHHHHHHHHHHHHhccC-CCEEEEECCCC
Confidence 579999962 23322111 1 246777878886 99988876543
No 260
>1m6y_A S-adenosyl-methyltransferase MRAW; SAM-dependent methyltransferase fold, protein-cofactor product complex, structural genomics, PSI; HET: SAH; 1.90A {Thermotoga maritima} SCOP: a.60.13.1 c.66.1.23 PDB: 1n2x_A*
Probab=99.00 E-value=6.3e-10 Score=101.37 Aligned_cols=87 Identities=16% Similarity=0.222 Sum_probs=72.5
Q ss_pred HHHHHhccCCCCCCeEEEEcCccCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHhhhCCCCCCCeEEEEecCCCCC--
Q 018740 166 FELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLP-- 243 (351)
Q Consensus 166 ~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~g~~~~~i~~~~~d~~~lp-- 243 (351)
.+.+.+.+...++.+|||+|||+|.++..+++..+..+|+|+|+|+.|++.|++++... ..++.++++|+.+++
T Consensus 15 l~e~l~~L~~~~g~~vLD~g~G~G~~s~~la~~~~~~~VigvD~d~~al~~A~~~~~~~----g~~v~~v~~d~~~l~~~ 90 (301)
T 1m6y_A 15 VREVIEFLKPEDEKIILDCTVGEGGHSRAILEHCPGCRIIGIDVDSEVLRIAEEKLKEF----SDRVSLFKVSYREADFL 90 (301)
T ss_dssp HHHHHHHHCCCTTCEEEETTCTTSHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHTGGG----TTTEEEEECCGGGHHHH
T ss_pred HHHHHHhcCCCCCCEEEEEeCCcCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHhc----CCcEEEEECCHHHHHHH
Confidence 44556667777788999999999999999999865679999999999999999998776 368999999998875
Q ss_pred CC---CCceeeEEecc
Q 018740 244 FA---SSSIDAVHAGA 256 (351)
Q Consensus 244 ~~---~~~fD~V~~~~ 256 (351)
+. .++||.|++..
T Consensus 91 l~~~g~~~~D~Vl~D~ 106 (301)
T 1m6y_A 91 LKTLGIEKVDGILMDL 106 (301)
T ss_dssp HHHTTCSCEEEEEEEC
T ss_pred HHhcCCCCCCEEEEcC
Confidence 11 15799999754
No 261
>3fut_A Dimethyladenosine transferase; methyltransferase, dimethyltransferase, dual-specific methyltransferase, 16S rRNA methyltransferase; 1.52A {Thermus thermophilus} PDB: 3fuu_A* 3fuv_A 3fuw_A* 3fux_A*
Probab=98.99 E-value=1e-09 Score=98.53 Aligned_cols=86 Identities=17% Similarity=0.200 Sum_probs=72.2
Q ss_pred HHHHHHHHhccCCCCCCeEEEEcCccCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHhhhCCCCCCCeEEEEecCCCC
Q 018740 163 EKEFELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRL 242 (351)
Q Consensus 163 ~~~~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~g~~~~~i~~~~~d~~~l 242 (351)
....+.+.+.+...++ +|||||||+|.++..+++.+. +|+|+|+++.|++.+++++. ..+++++++|+.++
T Consensus 33 ~~i~~~Iv~~~~~~~~-~VLEIG~G~G~lt~~L~~~~~--~V~avEid~~~~~~l~~~~~------~~~v~vi~~D~l~~ 103 (271)
T 3fut_A 33 EAHLRRIVEAARPFTG-PVFEVGPGLGALTRALLEAGA--EVTAIEKDLRLRPVLEETLS------GLPVRLVFQDALLY 103 (271)
T ss_dssp HHHHHHHHHHHCCCCS-CEEEECCTTSHHHHHHHHTTC--CEEEEESCGGGHHHHHHHTT------TSSEEEEESCGGGS
T ss_pred HHHHHHHHHhcCCCCC-eEEEEeCchHHHHHHHHHcCC--EEEEEECCHHHHHHHHHhcC------CCCEEEEECChhhC
Confidence 4556777888787778 999999999999999999975 99999999999999998754 25899999999988
Q ss_pred CCCCC-ceeeEEeccc
Q 018740 243 PFASS-SIDAVHAGAA 257 (351)
Q Consensus 243 p~~~~-~fD~V~~~~v 257 (351)
++++. .+|.|+++--
T Consensus 104 ~~~~~~~~~~iv~NlP 119 (271)
T 3fut_A 104 PWEEVPQGSLLVANLP 119 (271)
T ss_dssp CGGGSCTTEEEEEEEC
T ss_pred ChhhccCccEEEecCc
Confidence 77643 6888887643
No 262
>3bt7_A TRNA (uracil-5-)-methyltransferase; methyluridine, methyltransferase, TRMA, RUMT; HET: 5MU; 2.43A {Escherichia coli}
Probab=98.99 E-value=1.1e-09 Score=103.03 Aligned_cols=112 Identities=13% Similarity=0.175 Sum_probs=83.3
Q ss_pred HHHHHHHhccCCCCCCeEEEEcCccCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHhhhCCCCCCCeEEEEecCCCCC
Q 018740 164 KEFELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLP 243 (351)
Q Consensus 164 ~~~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~g~~~~~i~~~~~d~~~lp 243 (351)
...+.+.+.+... +.+|||+|||+|.++..+++... +|+|+|+|+.+++.|++++..+ | ..+++++.+|+.++.
T Consensus 201 ~l~~~~~~~~~~~-~~~vLDl~cG~G~~~l~la~~~~--~V~gvd~~~~ai~~a~~n~~~n-g--~~~v~~~~~d~~~~~ 274 (369)
T 3bt7_A 201 QMLEWALDVTKGS-KGDLLELYCGNGNFSLALARNFD--RVLATEIAKPSVAAAQYNIAAN-H--IDNVQIIRMAAEEFT 274 (369)
T ss_dssp HHHHHHHHHTTTC-CSEEEEESCTTSHHHHHHGGGSS--EEEEECCCHHHHHHHHHHHHHT-T--CCSEEEECCCSHHHH
T ss_pred HHHHHHHHHhhcC-CCEEEEccCCCCHHHHHHHhcCC--EEEEEECCHHHHHHHHHHHHHc-C--CCceEEEECCHHHHH
Confidence 3345555555543 56899999999999999988654 9999999999999999998876 2 368999999987642
Q ss_pred --CCC--------------CceeeEEeccccccCCChHHHHHHHHhcccCCcEEEEEeec
Q 018740 244 --FAS--------------SSIDAVHAGAAIHCWSSPSTGVAEISRVLRPGGVFVGTTYI 287 (351)
Q Consensus 244 --~~~--------------~~fD~V~~~~vl~h~~d~~~~l~~i~~~LkpgG~li~~~~~ 287 (351)
+.. .+||+|++.--- ..+..++.+.|+++|.++..+.+
T Consensus 275 ~~~~~~~~~~~l~~~~~~~~~fD~Vv~dPPr------~g~~~~~~~~l~~~g~ivyvsc~ 328 (369)
T 3bt7_A 275 QAMNGVREFNRLQGIDLKSYQCETIFVDPPR------SGLDSETEKMVQAYPRILYISCN 328 (369)
T ss_dssp HHHSSCCCCTTGGGSCGGGCCEEEEEECCCT------TCCCHHHHHHHTTSSEEEEEESC
T ss_pred HHHhhccccccccccccccCCCCEEEECcCc------cccHHHHHHHHhCCCEEEEEECC
Confidence 111 379999863110 12356677888899988876554
No 263
>2efj_A 3,7-dimethylxanthine methyltransferase; SAM-dependant methyltransferase, SAH, theobromine; HET: SAH 37T; 2.00A {Coffea canephora} PDB: 2eg5_A*
Probab=98.99 E-value=4e-09 Score=98.70 Aligned_cols=152 Identities=14% Similarity=0.031 Sum_probs=99.7
Q ss_pred CCeEEEEcCccCHHHHHHHHh-----------------CCCCeEEEEeCC-----------HHHHHHHHHHHhhhCCCCC
Q 018740 178 GGNIIDASCGSGLFSRIFAKS-----------------GLFSLVVALDYS-----------ENMLKQCYEFVQQESNFPK 229 (351)
Q Consensus 178 ~~~vLDiGcG~G~~~~~l~~~-----------------~~~~~v~gvD~s-----------~~~~~~a~~~~~~~~g~~~ 229 (351)
.-+|+|+||++|.++..+... .|..+|+.-|+- +.+.+.+++. . |. .
T Consensus 53 ~~~IaDlGCssG~NT~~~v~~ii~~i~~~~~~~~~~~~~pe~~v~~nDLp~NDFN~lF~~L~~~~~~~~~~---~-g~-~ 127 (384)
T 2efj_A 53 CFKVGDLGCASGPNTFSTVRDIVQSIDKVGQEKKNELERPTIQIFLNDLFQNDFNSVFKLLPSFYRNLEKE---N-GR-K 127 (384)
T ss_dssp EEEEEEETCCSSHHHHHHHHHHHHHHTCC----------CEEEEEEECCTTSCHHHHHHHHHHHHHHHHHH---T-CC-C
T ss_pred ceEEEecCCCCCchHHHHHHHHHHHHHHHhhhcccCCCCCceEEEecCCCccchHHHHhhhhhhHhhhhhh---c-cC-C
Confidence 468999999999998877665 355688899987 4433333221 1 11 1
Q ss_pred CCeEEEEecCC---CCCCCCCceeeEEeccccccCCChH---------------------------------------HH
Q 018740 230 ENFLLVRADIS---RLPFASSSIDAVHAGAAIHCWSSPS---------------------------------------TG 267 (351)
Q Consensus 230 ~~i~~~~~d~~---~lp~~~~~fD~V~~~~vl~h~~d~~---------------------------------------~~ 267 (351)
.+-.|+.+... .-.|+++++|+|+++.+|||+.+.. .+
T Consensus 128 ~~~~f~~gvpgSFy~rlfp~~S~d~v~Ss~aLHWls~~p~~l~~~~s~~~nkg~i~i~~~sp~~v~~ay~~Qf~~D~~~F 207 (384)
T 2efj_A 128 IGSCLIGAMPGSFYSRLFPEESMHFLHSCYCLHWLSQVPSGLVTELGISVNKGCIYSSKASRPPIQKAYLDQFTKDFTTF 207 (384)
T ss_dssp TTSEEEEECCSCTTSCCSCTTCEEEEEEESCTTBCSSSCCC------CCCCTTCSSSCTTSCHHHHHHHHHHHHHHHHHH
T ss_pred CCceEEEecchhhhhccCCCCceEEEEecceeeecCCCchhhhccccccccCCceEecCCCCHHHHHHHHHHHHHHHHHH
Confidence 23355555443 3568899999999999999986542 12
Q ss_pred HHHHHhcccCCcEEEEEeeccCCC--CCcc-hHHHHHHHH-----------HhhccCCccCCCHHHHHHHHHHCC-CeEE
Q 018740 268 VAEISRVLRPGGVFVGTTYIVDGP--FNLI-PFSRLLRQN-----------MMQISGSYTFLSEREIEDLCRACG-LVDF 332 (351)
Q Consensus 268 l~~i~~~LkpgG~li~~~~~~~~~--~~~~-~~~~~~~~~-----------~~~~~~~~~~~s~~~l~~ll~~aG-f~~v 332 (351)
|+..++.|+|||+++++....... .+.. ..+...+.. .......+.+.+.++++.++++.| |.+.
T Consensus 208 L~~Ra~eL~pGG~mvl~~~gr~~~~~~~~~~~~l~~al~~lv~eGli~~ek~dsf~~P~y~ps~~E~~~~le~~g~F~i~ 287 (384)
T 2efj_A 208 LRIHSEELISRGRMLLTFICKEDEFDHPNSMDLLEMSINDLVIEGHLEEEKLDSFNVPIYAPSTEEVKRIVEEEGSFEIL 287 (384)
T ss_dssp HHHHHHHEEEEEEEEEEEECCCTTTCCCCHHHHHHHHHHHHHHHTSSCHHHHHTCCCSBCCCCHHHHHHHHHHHCSEEEE
T ss_pred HHHHHHHhccCCeEEEEEecCCCcccCcccHHHHHHHHHHHHHhCCcchhhhcccCCcccCCCHHHHHHHHHHcCCceEE
Confidence 556689999999999999987653 2110 022222211 111233566789999999999985 6766
Q ss_pred EE
Q 018740 333 KC 334 (351)
Q Consensus 333 ~~ 334 (351)
+.
T Consensus 288 ~l 289 (384)
T 2efj_A 288 YL 289 (384)
T ss_dssp EE
T ss_pred EE
Confidence 53
No 264
>2qfm_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC; HET: SPD MTA; 1.80A {Homo sapiens} PDB: 3c6k_A* 3c6m_A*
Probab=98.96 E-value=1.1e-09 Score=101.27 Aligned_cols=110 Identities=14% Similarity=0.203 Sum_probs=81.6
Q ss_pred CCCeEEEEcCccCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHhhhCC--CCC---CCeEEEEecCCCCCC----CCC
Q 018740 177 LGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESN--FPK---ENFLLVRADISRLPF----ASS 247 (351)
Q Consensus 177 ~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~g--~~~---~~i~~~~~d~~~lp~----~~~ 247 (351)
.+.+||+||||+|.++..+++.++ .+|+++|+++.+++.|++++....+ ... ++++++.+|+...-- ..+
T Consensus 188 ~pkrVL~IGgG~G~~arellk~~~-~~Vt~VEID~~vie~Ar~~~~~l~~~~l~dp~~~rv~vi~~Da~~~L~~~~~~~~ 266 (364)
T 2qfm_A 188 TGKDVLILGGGDGGILCEIVKLKP-KMVTMVEIDQMVIDGCKKYMRKTCGDVLDNLKGDCYQVLIEDCIPVLKRYAKEGR 266 (364)
T ss_dssp TTCEEEEEECTTCHHHHHHHTTCC-SEEEEEESCHHHHHHHHHHCCC----CCSSSEETTEEEEESCHHHHHHHHHHHTC
T ss_pred CCCEEEEEECChhHHHHHHHHCCC-CEEEEEECCHHHHHHHHHHHHHhccccccccCCCcEEEEECcHHHHHHhhhccCC
Confidence 467999999999999999998875 7899999999999999998753210 111 279999999876431 357
Q ss_pred ceeeEEecccc-ccCCCh-----HHHHHHH----HhcccCCcEEEEEeec
Q 018740 248 SIDAVHAGAAI-HCWSSP-----STGVAEI----SRVLRPGGVFVGTTYI 287 (351)
Q Consensus 248 ~fD~V~~~~vl-~h~~d~-----~~~l~~i----~~~LkpgG~li~~~~~ 287 (351)
+||+|++.-.- ..-..| ..+++.+ .++|+|||++++....
T Consensus 267 ~fDvII~D~~d~P~~~~p~~L~t~eFy~~~~~~~~~~L~pgGilv~qs~s 316 (364)
T 2qfm_A 267 EFDYVINDLTAVPISTSPEEDSTWEFLRLILDLSMKVLKQDGKYFTQGNC 316 (364)
T ss_dssp CEEEEEEECCSSCCCCC----CHHHHHHHHHHHHHHTEEEEEEEEEEEEE
T ss_pred CceEEEECCCCcccCcCchhhhHHHHHHHHHHHHHhhCCCCcEEEEEcCC
Confidence 89999985432 111122 4666666 8999999999987554
No 265
>2ar0_A M.ecoki, type I restriction enzyme ecoki M protein; structural genomics, protein structure initiative, nysgxrc; 2.80A {Escherichia coli} SCOP: c.66.1.45 PDB: 2y7c_B 2y7h_B*
Probab=98.94 E-value=2.7e-09 Score=105.01 Aligned_cols=131 Identities=11% Similarity=0.028 Sum_probs=98.7
Q ss_pred cCCCCCcHHHHHHHHhccCCCCCCeEEEEcCccCHHHHHHHHhCC------------------CCeEEEEeCCHHHHHHH
Q 018740 156 WGGFPGPEKEFELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGL------------------FSLVVALDYSENMLKQC 217 (351)
Q Consensus 156 ~~~~~~~~~~~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~------------------~~~v~gvD~s~~~~~~a 217 (351)
.+.++.|....+.+.+.+.+.++.+|||.+||+|.++..+.+... ...++|+|+++.+++.|
T Consensus 148 ~G~fyTP~~iv~~mv~~l~p~~~~~VlDPaCGSG~fLi~a~~~l~~~~~~~~~~~~~~~~~~~~~~i~GiEid~~~~~lA 227 (541)
T 2ar0_A 148 AGQYFTPRPLIKTIIHLLKPQPREVVQDPAAGTAGFLIEADRYVKSQTNDLDDLDGDTQDFQIHRAFIGLELVPGTRRLA 227 (541)
T ss_dssp --CCCCCHHHHHHHHHHHCCCTTCCEEETTCTTTHHHHHHHHHHHTTTTTTTTSCHHHHHHHHHTSEEEEESCHHHHHHH
T ss_pred CCeeeCCHHHHHHHHHHhccCCCCeEecCCcccchHHHHHHHHHHHhhcccccCCHHHHhhhhcceEEEEcCCHHHHHHH
Confidence 355778888888888888887888999999999999988776410 13799999999999999
Q ss_pred HHHHhhhCCCCC---CCeEEEEecCCCCC-CCCCceeeEEeccccccCCC--------------hHHHHHHHHhcccCCc
Q 018740 218 YEFVQQESNFPK---ENFLLVRADISRLP-FASSSIDAVHAGAAIHCWSS--------------PSTGVAEISRVLRPGG 279 (351)
Q Consensus 218 ~~~~~~~~g~~~---~~i~~~~~d~~~lp-~~~~~fD~V~~~~vl~h~~d--------------~~~~l~~i~~~LkpgG 279 (351)
+.++... |... .++.+.++|....+ ...+.||+|+++--+..... ...+++.+.+.|+|||
T Consensus 228 ~~nl~l~-gi~~~~~~~~~I~~gDtL~~~~~~~~~fD~Vv~NPPf~~~~~~~~~~~~~~~~~~~~~~Fl~~~l~~Lk~gG 306 (541)
T 2ar0_A 228 LMNCLLH-DIEGNLDHGGAIRLGNTLGSDGENLPKAHIVATNPPFGSAAGTNITRTFVHPTSNKQLCFMQHIIETLHPGG 306 (541)
T ss_dssp HHHHHTT-TCCCBGGGTBSEEESCTTSHHHHTSCCEEEEEECCCCTTCSSCCCCSCCSSCCSCHHHHHHHHHHHHEEEEE
T ss_pred HHHHHHh-CCCccccccCCeEeCCCcccccccccCCeEEEECCCcccccchhhHhhcCCCCCchHHHHHHHHHHHhCCCC
Confidence 9887665 2211 02678899976643 34578999999754433211 1378999999999999
Q ss_pred EEEEEeec
Q 018740 280 VFVGTTYI 287 (351)
Q Consensus 280 ~li~~~~~ 287 (351)
++.+..+.
T Consensus 307 r~a~V~p~ 314 (541)
T 2ar0_A 307 RAAVVVPD 314 (541)
T ss_dssp EEEEEEEH
T ss_pred EEEEEecC
Confidence 99998875
No 266
>1m6e_X S-adenosyl-L-methionnine:salicylic acid carboxyl methyltransferase; rossmann fold, protein-small molecule complex; HET: SAH SAL; 3.00A {Clarkia breweri} SCOP: c.66.1.35
Probab=98.85 E-value=5.8e-09 Score=96.84 Aligned_cols=154 Identities=14% Similarity=0.081 Sum_probs=105.0
Q ss_pred CCeEEEEcCccCHHHHHHHHh----------------CCCCeEEEEeCCHHHHHHHHHHHhhhCCCCCCCeEEEE---ec
Q 018740 178 GGNIIDASCGSGLFSRIFAKS----------------GLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVR---AD 238 (351)
Q Consensus 178 ~~~vLDiGcG~G~~~~~l~~~----------------~~~~~v~gvD~s~~~~~~a~~~~~~~~g~~~~~i~~~~---~d 238 (351)
.-+|+|+||++|.++..+... .|..+|+.-|+..+.....-+.+.... ...+..|+. +.
T Consensus 52 ~~~IaDlGCs~G~Nt~~~v~~ii~~i~~~~~~~~~~~~pe~~v~~nDLp~NDFntlF~~L~~~~--~~~~~~f~~gvpgS 129 (359)
T 1m6e_X 52 RLAIADLGCSSGPNALFAVTELIKTVEELRKKMGRENSPEYQIFLNDLPGNDFNAIFRSLPIEN--DVDGVCFINGVPGS 129 (359)
T ss_dssp EECCEEESCCSSTTTTTGGGTTHHHHHHHHHSSSCSSCCEEEEEEEECTTSCHHHHHTTTTTSC--SCTTCEEEEEEESC
T ss_pred ceEEEecCCCCCcchHHHHHHHHHHHHHHHHhcCCCCCCceEEEecCCCchHHHHHHHhcchhc--ccCCCEEEEecchh
Confidence 357999999999877554433 356789999999888888877654320 001223444 44
Q ss_pred CCCCCCCCCceeeEEeccccccCCChH---------------------------------HHHHHHHhcccCCcEEEEEe
Q 018740 239 ISRLPFASSSIDAVHAGAAIHCWSSPS---------------------------------TGVAEISRVLRPGGVFVGTT 285 (351)
Q Consensus 239 ~~~lp~~~~~fD~V~~~~vl~h~~d~~---------------------------------~~l~~i~~~LkpgG~li~~~ 285 (351)
+..-.++++++|+|+++.+|||+.+.. .+|+..++.|+|||+++++.
T Consensus 130 Fy~rlfp~~S~d~v~Ss~aLHWls~~p~~l~~nkg~i~~~~~~p~~v~~ay~~Qf~~D~~~FL~~Ra~EL~pGG~mvl~~ 209 (359)
T 1m6e_X 130 FYGRLFPRNTLHFIHSSYSLMWLSQVPIGIESNKGNIYMANTCPQSVLNAYYKQFQEDHALFLRCRAQEVVPGGRMVLTI 209 (359)
T ss_dssp SSSCCSCTTCBSCEEEESCTTBCSSCCSCCCCCTTTTSSCSSSCCTTSCCSHHHHHHHHHHHHHHHHHHBCTTCEEEEEE
T ss_pred hhhccCCCCceEEEEehhhhhhcccCchhhhccCCceEecCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCceEEEEE
Confidence 555678899999999999999986421 34888899999999999999
Q ss_pred eccCCCCC-------cchHHHHHHHHHh-----------hccCCccCCCHHHHHHHHHHCCC-eEEE
Q 018740 286 YIVDGPFN-------LIPFSRLLRQNMM-----------QISGSYTFLSEREIEDLCRACGL-VDFK 333 (351)
Q Consensus 286 ~~~~~~~~-------~~~~~~~~~~~~~-----------~~~~~~~~~s~~~l~~ll~~aGf-~~v~ 333 (351)
.......+ ....+...+..+. .....+.+.+.++++.++++.|. .+.+
T Consensus 210 ~gr~~~~~~~~~~~~~~~~l~~al~~mv~eGli~~ek~d~f~~P~y~ps~~E~~~~ie~~G~F~i~~ 276 (359)
T 1m6e_X 210 LGRRSEDRASTECCLIWQLLAMALNQMVSEGLIEEEKMDKFNIPQYTPSPTEVEAEILKEGSFLIDH 276 (359)
T ss_dssp EECSSSSSSSTTTSTTTHHHHHHHHHHHHTTCSCCSTTGGGCCCCBCCCSHHHHHHHHHTTTBCCEE
T ss_pred ecCCCCCccccchHHHHHHHHHHHHHHHHccccchhhhhccCCCccCCCHHHHHHHHHHcCCceEEE
Confidence 87754321 1222333222111 12335568899999999999966 5444
No 267
>2dul_A N(2),N(2)-dimethylguanosine tRNA methyltransferas; tRNA modification enzyme, guanine 26, N(2),N(2)-dimethyltran structural genomics; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.58 PDB: 2ejt_A* 2eju_A* 2ytz_A*
Probab=98.85 E-value=5.5e-09 Score=98.25 Aligned_cols=105 Identities=17% Similarity=0.107 Sum_probs=81.9
Q ss_pred CCCeEEEEcCccCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHhhhCCC------------CCCCeEEEEecCCCCCC
Q 018740 177 LGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNF------------PKENFLLVRADISRLPF 244 (351)
Q Consensus 177 ~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~g~------------~~~~i~~~~~d~~~lp~ 244 (351)
++.+|||+|||+|..+..+++..+..+|+++|+++.+++.++++++.+... +..+++++++|+..+..
T Consensus 47 ~~~~VLDl~aGtG~~~l~~a~~~~~~~V~avDi~~~av~~a~~N~~~n~~~~~~~~~~~~~~~gl~~i~v~~~Da~~~~~ 126 (378)
T 2dul_A 47 NPKIVLDALSATGIRGIRFALETPAEEVWLNDISEDAYELMKRNVMLNFDGELRESKGRAILKGEKTIVINHDDANRLMA 126 (378)
T ss_dssp CCSEEEESSCTTSHHHHHHHHHSSCSEEEEEESCHHHHHHHHHHHHHHCCSCCEECSSEEEEESSSEEEEEESCHHHHHH
T ss_pred CCCEEEECCCchhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHHhcccccccccccccccCCCceEEEcCcHHHHHH
Confidence 467999999999999999999854568999999999999999998775100 12348999999866431
Q ss_pred -CCCceeeEEeccccccCCChHHHHHHHHhcccCCcEEEEEe
Q 018740 245 -ASSSIDAVHAGAAIHCWSSPSTGVAEISRVLRPGGVFVGTT 285 (351)
Q Consensus 245 -~~~~fD~V~~~~vl~h~~d~~~~l~~i~~~LkpgG~li~~~ 285 (351)
..+.||+|++.- ...+..++..+.+.|+|||+++++.
T Consensus 127 ~~~~~fD~I~lDP----~~~~~~~l~~a~~~lk~gG~l~vt~ 164 (378)
T 2dul_A 127 ERHRYFHFIDLDP----FGSPMEFLDTALRSAKRRGILGVTA 164 (378)
T ss_dssp HSTTCEEEEEECC----SSCCHHHHHHHHHHEEEEEEEEEEE
T ss_pred hccCCCCEEEeCC----CCCHHHHHHHHHHhcCCCCEEEEEe
Confidence 135799999532 1245788999999999999888765
No 268
>3uzu_A Ribosomal RNA small subunit methyltransferase A; ssgcid, seattle structural genomics center for infectio disease; 1.75A {Burkholderia pseudomallei}
Probab=98.85 E-value=5.8e-09 Score=93.99 Aligned_cols=77 Identities=14% Similarity=0.189 Sum_probs=64.0
Q ss_pred HHHHHHHHhccCCCCCCeEEEEcCccCHHHHHHHHhCCC--CeEEEEeCCHHHHHHHHHHHhhhCCCCCCCeEEEEecCC
Q 018740 163 EKEFELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLF--SLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADIS 240 (351)
Q Consensus 163 ~~~~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~--~~v~gvD~s~~~~~~a~~~~~~~~g~~~~~i~~~~~d~~ 240 (351)
....+.+.+.+...++.+|||||||+|.++..+++.+.. .+|+|+|+|+.|++.++++. . .+++++++|+.
T Consensus 28 ~~i~~~iv~~~~~~~~~~VLEIG~G~G~lt~~La~~~~~~~~~V~avDid~~~l~~a~~~~--~-----~~v~~i~~D~~ 100 (279)
T 3uzu_A 28 HGVIDAIVAAIRPERGERMVEIGPGLGALTGPVIARLATPGSPLHAVELDRDLIGRLEQRF--G-----ELLELHAGDAL 100 (279)
T ss_dssp HHHHHHHHHHHCCCTTCEEEEECCTTSTTHHHHHHHHCBTTBCEEEEECCHHHHHHHHHHH--G-----GGEEEEESCGG
T ss_pred HHHHHHHHHhcCCCCcCEEEEEccccHHHHHHHHHhCCCcCCeEEEEECCHHHHHHHHHhc--C-----CCcEEEECChh
Confidence 445567777777778899999999999999999998761 23999999999999999873 2 57999999999
Q ss_pred CCCCCC
Q 018740 241 RLPFAS 246 (351)
Q Consensus 241 ~lp~~~ 246 (351)
++++++
T Consensus 101 ~~~~~~ 106 (279)
T 3uzu_A 101 TFDFGS 106 (279)
T ss_dssp GCCGGG
T ss_pred cCChhH
Confidence 987653
No 269
>3ftd_A Dimethyladenosine transferase; KSGA, rossmann-like fold, RNA methyltransferase, mtase, anti resistance, methyltransferase, RNA-binding; 1.44A {Aquifex aeolicus} PDB: 3ftc_A 3fte_A 3ftf_A* 3r9x_B*
Probab=98.84 E-value=1.4e-08 Score=90.10 Aligned_cols=91 Identities=14% Similarity=0.273 Sum_probs=69.9
Q ss_pred HHHHHHHHhccCCCCCCeEEEEcCccCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHhhhCCCCCCCeEEEEecCCCC
Q 018740 163 EKEFELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRL 242 (351)
Q Consensus 163 ~~~~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~g~~~~~i~~~~~d~~~l 242 (351)
....+.+.+.+...++.+|||||||+|.++..+++.+ ..+|+|+|+|+.+++.++++ . ..+++++++|+.++
T Consensus 17 ~~i~~~iv~~~~~~~~~~VLDiG~G~G~lt~~L~~~~-~~~v~avEid~~~~~~~~~~---~----~~~v~~i~~D~~~~ 88 (249)
T 3ftd_A 17 EGVLKKIAEELNIEEGNTVVEVGGGTGNLTKVLLQHP-LKKLYVIELDREMVENLKSI---G----DERLEVINEDASKF 88 (249)
T ss_dssp HHHHHHHHHHTTCCTTCEEEEEESCHHHHHHHHTTSC-CSEEEEECCCHHHHHHHTTS---C----CTTEEEECSCTTTC
T ss_pred HHHHHHHHHhcCCCCcCEEEEEcCchHHHHHHHHHcC-CCeEEEEECCHHHHHHHHhc---c----CCCeEEEEcchhhC
Confidence 4455677777777788899999999999999999984 34999999999999999875 2 46899999999998
Q ss_pred CCCCCceeeEEeccccccC
Q 018740 243 PFASSSIDAVHAGAAIHCW 261 (351)
Q Consensus 243 p~~~~~fD~V~~~~vl~h~ 261 (351)
++++..-+.++..+.-.++
T Consensus 89 ~~~~~~~~~~vv~NlPy~i 107 (249)
T 3ftd_A 89 PFCSLGKELKVVGNLPYNV 107 (249)
T ss_dssp CGGGSCSSEEEEEECCTTT
T ss_pred ChhHccCCcEEEEECchhc
Confidence 8764221334444444444
No 270
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=98.83 E-value=2.7e-08 Score=100.89 Aligned_cols=125 Identities=14% Similarity=0.040 Sum_probs=89.8
Q ss_pred cHHHHHHHHhccCCCCCCeEEEEcCccCHHHHHHHHhC------------------------------------------
Q 018740 162 PEKEFELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSG------------------------------------------ 199 (351)
Q Consensus 162 ~~~~~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~------------------------------------------ 199 (351)
.+.++..+.......++..|||.+||+|.++..++..+
T Consensus 175 ~e~LAa~ll~~~~~~~~~~llDP~CGSGt~lIeAa~~a~~~apG~~R~~f~fe~w~~~~~~~w~~~~~ea~~~~~~~~~~ 254 (703)
T 3v97_A 175 KETLAAAIVMRSGWQPGTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIWQEVKAEAQTRARKGLAE 254 (703)
T ss_dssp CHHHHHHHHHHTTCCTTSCEEETTCTTSHHHHHHHHHHTTCCTTTTCCCCTTTTBTTCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHhhCCCCCCeEEecCCCCcHHHHHHHHHHhhcCCCCCccccchhhcccCCHHHHHHHHHHHHHHhhhcccc
Confidence 35566667777777778899999999999998877642
Q ss_pred CCCeEEEEeCCHHHHHHHHHHHhhhCCCCCCCeEEEEecCCCCC--CCCCceeeEEecccc-ccCCC---hHHH---HHH
Q 018740 200 LFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLP--FASSSIDAVHAGAAI-HCWSS---PSTG---VAE 270 (351)
Q Consensus 200 ~~~~v~gvD~s~~~~~~a~~~~~~~~g~~~~~i~~~~~d~~~lp--~~~~~fD~V~~~~vl-~h~~d---~~~~---l~~ 270 (351)
+...++|+|+++.+++.|+.++... |. ...+.+.++|+.++. ...++||+|+++--. +.+.+ ...+ +.+
T Consensus 255 ~~~~i~G~Did~~av~~A~~N~~~a-gv-~~~i~~~~~D~~~~~~~~~~~~~d~Iv~NPPYG~Rlg~~~~l~~ly~~l~~ 332 (703)
T 3v97_A 255 YSSHFYGSDSDARVIQRARTNARLA-GI-GELITFEVKDVAQLTNPLPKGPYGTVLSNPPYGERLDSEPALIALHSLLGR 332 (703)
T ss_dssp CCCCEEEEESCHHHHHHHHHHHHHT-TC-GGGEEEEECCGGGCCCSCTTCCCCEEEECCCCCC---CCHHHHHHHHHHHH
T ss_pred CCccEEEEECCHHHHHHHHHHHHHc-CC-CCceEEEECChhhCccccccCCCCEEEeCCCccccccchhHHHHHHHHHHH
Confidence 1247999999999999999999887 32 235999999998873 334489999998332 12222 2233 444
Q ss_pred HHhcccCCcEEEEEeecc
Q 018740 271 ISRVLRPGGVFVGTTYIV 288 (351)
Q Consensus 271 i~~~LkpgG~li~~~~~~ 288 (351)
+.+.+.|||.+++.++..
T Consensus 333 ~lk~~~~g~~~~ilt~~~ 350 (703)
T 3v97_A 333 IMKNQFGGWNLSLFSASP 350 (703)
T ss_dssp HHHHHCTTCEEEEEESCH
T ss_pred HHHhhCCCCeEEEEeCCH
Confidence 455556899999988643
No 271
>3lkd_A Type I restriction-modification system methyltransferase subunit; Q5M500_STRT2, STU0711, NESG, SUR80, structural genomics, PSI-2; 2.25A {Streptococcus thermophilus}
Probab=98.82 E-value=4.1e-08 Score=96.40 Aligned_cols=147 Identities=18% Similarity=0.080 Sum_probs=107.3
Q ss_pred Chhhhhhhhhhhhh-----hhcCCCCCcHHHHHHHHhccC----CCCCCeEEEEcCccCHHHHHHHHhC---CCCeEEEE
Q 018740 140 PFMSFIYERGWRQN-----FVWGGFPGPEKEFELMKGYLK----PVLGGNIIDASCGSGLFSRIFAKSG---LFSLVVAL 207 (351)
Q Consensus 140 ~~~~~~~~~~~r~~-----~~~~~~~~~~~~~~~l~~~l~----~~~~~~vLDiGcG~G~~~~~l~~~~---~~~~v~gv 207 (351)
+.+...|+...++. -..+.|+.|....+.+...+. +.++.+|||.+||+|.++..+.+.. ....++|+
T Consensus 175 D~lG~~YE~ll~~~a~~~~k~~G~fyTP~~Vv~lmv~ll~~~~~~~~~~~VlDPaCGSG~fLi~a~~~l~~~~~~~i~G~ 254 (542)
T 3lkd_A 175 DMLGDAYEYLIGQFATDSGKKAGEFYTPQPVAKLMTQIAFLGREDKQGFTLYDATMGSGSLLLNAKRYSRQPQTVVYFGQ 254 (542)
T ss_dssp THHHHHHHHHHHHHHCC---CCSSCCCCHHHHHHHHHHHHTTCTTCTTCEEEETTCTTSTTGGGHHHHCSCTTTCEEEEE
T ss_pred hHHHHHHHHHHHHHHHHhcccCCeecccHHHHHHHHHHHhcccCCCCCCEEeecccchhHHHHHHHHHHHhccCceEEEE
Confidence 34455555444332 124567888988888888776 4567899999999999998887762 24589999
Q ss_pred eCCHHHHHHHHHHHhhhCCCCCCCeEEEEecCCCC--C-CCCCceeeEEecccc--cc-----------------CC---
Q 018740 208 DYSENMLKQCYEFVQQESNFPKENFLLVRADISRL--P-FASSSIDAVHAGAAI--HC-----------------WS--- 262 (351)
Q Consensus 208 D~s~~~~~~a~~~~~~~~g~~~~~i~~~~~d~~~l--p-~~~~~fD~V~~~~vl--~h-----------------~~--- 262 (351)
|+++.++..|+.++... |....++.+.++|.... | .....||+|+++--+ .+ ++
T Consensus 255 Eid~~~~~lA~~Nl~l~-gi~~~~~~I~~gDtL~~d~p~~~~~~fD~IvaNPPf~~~~~~~~~~~~d~rf~~~G~~~~~s 333 (542)
T 3lkd_A 255 ELNTSTYNLARMNMILH-GVPIENQFLHNADTLDEDWPTQEPTNFDGVLMNPPYSAKWSASSGFMDDPRFSPFGKLAPKS 333 (542)
T ss_dssp ESCHHHHHHHHHHHHHT-TCCGGGEEEEESCTTTSCSCCSSCCCBSEEEECCCTTCCCCCCGGGGGSTTTGGGSSCCCTT
T ss_pred ECcHHHHHHHHHHHHHc-CCCcCccceEecceecccccccccccccEEEecCCcCCccccchhhhhhhhhhhhhhcCCCc
Confidence 99999999999987765 33235788999998765 3 346789999987221 00 11
Q ss_pred C-hHHHHHHHHhccc-CCcEEEEEeec
Q 018740 263 S-PSTGVAEISRVLR-PGGVFVGTTYI 287 (351)
Q Consensus 263 d-~~~~l~~i~~~Lk-pgG~li~~~~~ 287 (351)
+ -..+++.+.+.|+ |||++.+..|.
T Consensus 334 ~~~~~Fl~~~l~~Lk~~gGr~a~VlP~ 360 (542)
T 3lkd_A 334 KADFAFLLHGYYHLKQDNGVMAIVLPH 360 (542)
T ss_dssp CCHHHHHHHHHHTBCTTTCEEEEEEET
T ss_pred hhhHHHHHHHHHHhCCCceeEEEEecc
Confidence 1 1258999999999 99999998876
No 272
>3axs_A Probable N(2),N(2)-dimethylguanosine tRNA methylt TRM1; structural genomics, riken structural genomics/proteomics in RSGI; HET: SFG; 2.16A {Aquifex aeolicus} PDB: 3axt_A*
Probab=98.81 E-value=1e-08 Score=96.60 Aligned_cols=104 Identities=15% Similarity=0.143 Sum_probs=82.2
Q ss_pred CCCCeEEEEcCccCHHHHHHHHhCCC-CeEEEEeCCHHHHHHHHHHHhhhCCCCCCC-eEEEEecCCCCC--CCCCceee
Q 018740 176 VLGGNIIDASCGSGLFSRIFAKSGLF-SLVVALDYSENMLKQCYEFVQQESNFPKEN-FLLVRADISRLP--FASSSIDA 251 (351)
Q Consensus 176 ~~~~~vLDiGcG~G~~~~~l~~~~~~-~~v~gvD~s~~~~~~a~~~~~~~~g~~~~~-i~~~~~d~~~lp--~~~~~fD~ 251 (351)
.++.+|||++||+|.++..++....+ .+|+++|+++.+++.++++++.+ |. ..+ ++++.+|+.++. ...+.||+
T Consensus 51 ~~g~~VLDlfaGtG~~sl~aa~~~~ga~~V~avDi~~~av~~~~~N~~~N-gl-~~~~v~v~~~Da~~~l~~~~~~~fD~ 128 (392)
T 3axs_A 51 GRPVKVADPLSASGIRAIRFLLETSCVEKAYANDISSKAIEIMKENFKLN-NI-PEDRYEIHGMEANFFLRKEWGFGFDY 128 (392)
T ss_dssp CSCEEEEESSCTTSHHHHHHHHHCSCEEEEEEECSCHHHHHHHHHHHHHT-TC-CGGGEEEECSCHHHHHHSCCSSCEEE
T ss_pred CCCCEEEECCCcccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHh-CC-CCceEEEEeCCHHHHHHHhhCCCCcE
Confidence 34679999999999999999986422 48999999999999999999887 32 223 999999986532 12457999
Q ss_pred EEeccccccCCChHHHHHHHHhcccCCcEEEEEe
Q 018740 252 VHAGAAIHCWSSPSTGVAEISRVLRPGGVFVGTT 285 (351)
Q Consensus 252 V~~~~vl~h~~d~~~~l~~i~~~LkpgG~li~~~ 285 (351)
|++.- ...+..++..+.+.|+|||+++++.
T Consensus 129 V~lDP----~g~~~~~l~~a~~~Lk~gGll~~t~ 158 (392)
T 3axs_A 129 VDLDP----FGTPVPFIESVALSMKRGGILSLTA 158 (392)
T ss_dssp EEECC----SSCCHHHHHHHHHHEEEEEEEEEEE
T ss_pred EEECC----CcCHHHHHHHHHHHhCCCCEEEEEe
Confidence 99754 2234678999999999999888766
No 273
>4gqb_A Protein arginine N-methyltransferase 5; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens} PDB: 4g56_A*
Probab=98.77 E-value=3.3e-08 Score=98.05 Aligned_cols=101 Identities=12% Similarity=0.060 Sum_probs=71.9
Q ss_pred CCeEEEEcCccCHHHHHHHHhC----CCCeEEEEeCCHHHHHHHHHHHhhhCCCCCCCeEEEEecCCCCCCCCCceeeEE
Q 018740 178 GGNIIDASCGSGLFSRIFAKSG----LFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLPFASSSIDAVH 253 (351)
Q Consensus 178 ~~~vLDiGcG~G~~~~~l~~~~----~~~~v~gvD~s~~~~~~a~~~~~~~~g~~~~~i~~~~~d~~~lp~~~~~fD~V~ 253 (351)
...|||||||+|.++....+.+ ...+|+++|-|+ +...+++....+ |. ..+|+++.+|++++..+ +++|+|+
T Consensus 358 ~~vVldVGaGrGpLv~~al~A~a~~~~~vkVyAVEknp-~A~~a~~~v~~N-~~-~dkVtVI~gd~eev~LP-EKVDIIV 433 (637)
T 4gqb_A 358 VQVLMVLGAGRGPLVNASLRAAKQADRRIKLYAVEKNP-NAVVTLENWQFE-EW-GSQVTVVSSDMREWVAP-EKADIIV 433 (637)
T ss_dssp EEEEEEESCTTSHHHHHHHHHHHHTTCEEEEEEEESCH-HHHHHHHHHHHH-TT-GGGEEEEESCTTTCCCS-SCEEEEE
T ss_pred CcEEEEECCCCcHHHHHHHHHHHhcCCCcEEEEEECCH-HHHHHHHHHHhc-cC-CCeEEEEeCcceeccCC-cccCEEE
Confidence 4579999999999854444432 223689999997 566777776665 33 67899999999998765 6799999
Q ss_pred eccccccC--CChHHHHHHHHhcccCCcEEE
Q 018740 254 AGAAIHCW--SSPSTGVAEISRVLRPGGVFV 282 (351)
Q Consensus 254 ~~~vl~h~--~d~~~~l~~i~~~LkpgG~li 282 (351)
+-..=..+ ......|....|.|||||+++
T Consensus 434 SEwMG~fLl~E~mlevL~Ardr~LKPgGimi 464 (637)
T 4gqb_A 434 SELLGSFADNELSPECLDGAQHFLKDDGVSI 464 (637)
T ss_dssp CCCCBTTBGGGCHHHHHHHHGGGEEEEEEEE
T ss_pred EEcCcccccccCCHHHHHHHHHhcCCCcEEc
Confidence 73221101 112256778889999999864
No 274
>2r6z_A UPF0341 protein in RSP 3' region; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 1.80A {Neisseria gonorrhoeae}
Probab=98.76 E-value=1.7e-09 Score=96.52 Aligned_cols=87 Identities=16% Similarity=0.146 Sum_probs=65.9
Q ss_pred HhccCCCCCCeEEEEcCccCHHHHHHHHhCCCCeEEEEeCCH-------HHHHHHHHHHhhhCCCCCCCeEEEEecCCCC
Q 018740 170 KGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSE-------NMLKQCYEFVQQESNFPKENFLLVRADISRL 242 (351)
Q Consensus 170 ~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~-------~~~~~a~~~~~~~~g~~~~~i~~~~~d~~~l 242 (351)
...+...++.+|||+|||+|.++..+++.+. +|+|+|+|+ .+++.|++++... +. ..+++++++|+.++
T Consensus 76 ~~a~~~~~~~~VLDlgcG~G~~a~~lA~~g~--~V~~vD~s~~~~~ll~~~l~~a~~n~~~~-~~-~~ri~~~~~d~~~~ 151 (258)
T 2r6z_A 76 AKAVNHTAHPTVWDATAGLGRDSFVLASLGL--TVTAFEQHPAVACLLSDGIRRALLNPETQ-DT-AARINLHFGNAAEQ 151 (258)
T ss_dssp HHHTTGGGCCCEEETTCTTCHHHHHHHHTTC--CEEEEECCHHHHHHHHHHHHHHHHSHHHH-HH-HTTEEEEESCHHHH
T ss_pred HHHhCcCCcCeEEEeeCccCHHHHHHHHhCC--EEEEEECChhhhHHHHHHHHHHHhHHHhh-CC-ccCeEEEECCHHHH
Confidence 3333444567999999999999999999865 999999999 9999998876544 11 13599999999774
Q ss_pred -C-CCC--CceeeEEecccccc
Q 018740 243 -P-FAS--SSIDAVHAGAAIHC 260 (351)
Q Consensus 243 -p-~~~--~~fD~V~~~~vl~h 260 (351)
+ +++ ++||+|++.-.+.|
T Consensus 152 l~~~~~~~~~fD~V~~dP~~~~ 173 (258)
T 2r6z_A 152 MPALVKTQGKPDIVYLDPMYPE 173 (258)
T ss_dssp HHHHHHHHCCCSEEEECCCC--
T ss_pred HHhhhccCCCccEEEECCCCCC
Confidence 3 334 68999999766655
No 275
>2qy6_A UPF0209 protein YFCK; structural genomics, unknown function, PSI-2, protein struct initiative; 2.00A {Escherichia coli}
Probab=98.76 E-value=2e-08 Score=89.30 Aligned_cols=142 Identities=14% Similarity=0.072 Sum_probs=92.6
Q ss_pred CCCeEEEEcCccCHHHHHHHHh-------CCC-----CeEEEEeCCH---HHHH-----------HHHHHHhhhC-----
Q 018740 177 LGGNIIDASCGSGLFSRIFAKS-------GLF-----SLVVALDYSE---NMLK-----------QCYEFVQQES----- 225 (351)
Q Consensus 177 ~~~~vLDiGcG~G~~~~~l~~~-------~~~-----~~v~gvD~s~---~~~~-----------~a~~~~~~~~----- 225 (351)
+..+|||||+|+|..+..+++. .|. .+++++|..+ +++. .+++.++.+.
T Consensus 60 ~~~~ILEiGfGtG~n~l~~~~~~~~~~~~~p~~~~~~l~~isiE~~p~~~~~l~~a~~~~p~l~~~a~~l~~~w~~~~~g 139 (257)
T 2qy6_A 60 PLFVVAESGFGTGLNFLTLWQAFDQFREAHPQAQLQRLHFISFEKFPLTRADLALAHQHWPELAPWAEQLQAQWPMPLPG 139 (257)
T ss_dssp SEEEEEESCCTTSHHHHHHHHHHHHHHHHCTTSSCCEEEEEEEESSCCCHHHHHHHHTTCGGGHHHHHHHHHTCCCSCSE
T ss_pred CCCEEEEECCChHHHHHHHHHHHHhhhhhCCCCCcceeEEEEEECCcCCHHHHHHHHhcChhHHHHHHHHHHhccccccc
Confidence 4569999999999988776553 442 4899999876 4444 5555554310
Q ss_pred ------CCCCCCeEEEEecCCC-CCCCC----CceeeEEecc-ccccCCC--hHHHHHHHHhcccCCcEEEEEeeccCCC
Q 018740 226 ------NFPKENFLLVRADISR-LPFAS----SSIDAVHAGA-AIHCWSS--PSTGVAEISRVLRPGGVFVGTTYIVDGP 291 (351)
Q Consensus 226 ------g~~~~~i~~~~~d~~~-lp~~~----~~fD~V~~~~-vl~h~~d--~~~~l~~i~~~LkpgG~li~~~~~~~~~ 291 (351)
.....+++++.+|+.+ ++..+ ..||+|+... .-..-++ -..+++.+.++|+|||+|+. +..
T Consensus 140 ~~r~~~~~~~~~l~l~~GDa~~~l~~~~~~~~~~~D~iflD~fsp~~~p~lw~~~~l~~l~~~L~pGG~l~t--ysa--- 214 (257)
T 2qy6_A 140 CHRLLLDEGRVTLDLWFGDINELISQLDDSLNQKVDAWFLDGFAPAKNPDMWTQNLFNAMARLARPGGTLAT--FTS--- 214 (257)
T ss_dssp EEEEEEC--CEEEEEEESCHHHHGGGSCGGGTTCEEEEEECSSCTTTCGGGCCHHHHHHHHHHEEEEEEEEE--SCC---
T ss_pred hhheeccCCceEEEEEECcHHHHHhhcccccCCeEEEEEECCCCcccChhhcCHHHHHHHHHHcCCCcEEEE--EeC---
Confidence 0012467889999866 44322 2799999743 2221122 24789999999999999884 221
Q ss_pred CCcchHHHHHHHHHhhccCCccCCCHHHHHHHHHHCCCeEEEEEec-CeEEEEEEecC
Q 018740 292 FNLIPFSRLLRQNMMQISGSYTFLSEREIEDLCRACGLVDFKCTRN-RGFVMFTATKP 348 (351)
Q Consensus 292 ~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~~ll~~aGf~~v~~~~~-g~~~~~~a~kp 348 (351)
...++..|.++||.+.+.... +...+..+.|+
T Consensus 215 -------------------------a~~vrr~L~~aGF~v~~~~g~~~kr~m~~a~~~ 247 (257)
T 2qy6_A 215 -------------------------AGFVRRGLQEAGFTMQKRKGFGRKREMLCGVME 247 (257)
T ss_dssp -------------------------BHHHHHHHHHHTEEEEEECCSTTCCCEEEEEEC
T ss_pred -------------------------CHHHHHHHHHCCCEEEeCCCCCCCCceEEEEec
Confidence 125778888899997764433 34456666554
No 276
>1qyr_A KSGA, high level kasugamycin resistance protein, S-adenosylMet; adenosine dimethyltransferase, rRNA modification, transferase, translation; 2.10A {Escherichia coli} SCOP: c.66.1.24 PDB: 4adv_V 3tpz_A
Probab=98.74 E-value=5.4e-09 Score=92.88 Aligned_cols=86 Identities=7% Similarity=0.108 Sum_probs=64.2
Q ss_pred HHHHHHHhccCCCCCCeEEEEcCccCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHhhhCCCCCCCeEEEEecCCCCC
Q 018740 164 KEFELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLP 243 (351)
Q Consensus 164 ~~~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~g~~~~~i~~~~~d~~~lp 243 (351)
...+.+.+.+...++.+|||||||+|.++. +. .+...+|+|+|+++.|++.+++++... ++++++++|+.+++
T Consensus 8 ~i~~~iv~~~~~~~~~~VLEIG~G~G~lt~-l~-~~~~~~v~avEid~~~~~~a~~~~~~~-----~~v~~i~~D~~~~~ 80 (252)
T 1qyr_A 8 FVIDSIVSAINPQKGQAMVEIGPGLAALTE-PV-GERLDQLTVIELDRDLAARLQTHPFLG-----PKLTIYQQDAMTFN 80 (252)
T ss_dssp HHHHHHHHHHCCCTTCCEEEECCTTTTTHH-HH-HTTCSCEEEECCCHHHHHHHHTCTTTG-----GGEEEECSCGGGCC
T ss_pred HHHHHHHHhcCCCCcCEEEEECCCCcHHHH-hh-hCCCCeEEEEECCHHHHHHHHHHhccC-----CceEEEECchhhCC
Confidence 334566666777778899999999999999 65 454222999999999999999865432 58999999999887
Q ss_pred CCCC-----ceeeEEecc
Q 018740 244 FASS-----SIDAVHAGA 256 (351)
Q Consensus 244 ~~~~-----~fD~V~~~~ 256 (351)
+++. ..|.|+++-
T Consensus 81 ~~~~~~~~~~~~~vvsNl 98 (252)
T 1qyr_A 81 FGELAEKMGQPLRVFGNL 98 (252)
T ss_dssp HHHHHHHHTSCEEEEEEC
T ss_pred HHHhhcccCCceEEEECC
Confidence 5431 245666553
No 277
>3khk_A Type I restriction-modification system methylation subunit; structural genomics, PSI-2, protein structure initiative; 2.55A {Methanosarcina mazei}
Probab=98.72 E-value=2.8e-08 Score=97.67 Aligned_cols=145 Identities=18% Similarity=0.062 Sum_probs=103.1
Q ss_pred Chhhhhhhhhhhhh-----hhcCCCCCcHHHHHHHHhccCCCCCCeEEEEcCccCHHHHHHHHhCC--------------
Q 018740 140 PFMSFIYERGWRQN-----FVWGGFPGPEKEFELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGL-------------- 200 (351)
Q Consensus 140 ~~~~~~~~~~~r~~-----~~~~~~~~~~~~~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~-------------- 200 (351)
+++...|+...++. -..+.|+.|....+.+.+.+.+.++ +|||.+||+|.++..+.+...
T Consensus 203 D~lG~~yE~ll~~~a~~~~k~~G~fyTP~~Vv~lmv~ll~p~~~-~VlDPaCGSG~fLi~a~~~l~~~~~~~~~~~~~~~ 281 (544)
T 3khk_A 203 DILGHVYEYFLGQFALAEGKQGGQYYTPKSIVTLIVEMLEPYKG-RVYDPAMGSGGFFVSSDKFIEKHANVKHYNASEQK 281 (544)
T ss_dssp CSHHHHHHHHHHHHHHTTTCCSTTTCCCHHHHHHHHHHHCCCSE-EEEESSCTTCHHHHHHHHHHHHHHHHHTSCHHHHG
T ss_pred hHHHHHHHHHHHHHHHhhCccCCeEeCCHHHHHHHHHHHhcCCC-eEeCcccCcCcHHHHHHHHHHHhccccccchHHHh
Confidence 45555555443331 1335678899999999999887655 999999999999887754310
Q ss_pred -CCeEEEEeCCHHHHHHHHHHHhhhCCCCCCCeEEEEecCCCCC-CCCCceeeEEecccccc------------------
Q 018740 201 -FSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLP-FASSSIDAVHAGAAIHC------------------ 260 (351)
Q Consensus 201 -~~~v~gvD~s~~~~~~a~~~~~~~~g~~~~~i~~~~~d~~~lp-~~~~~fD~V~~~~vl~h------------------ 260 (351)
...++|+|+++.+++.|+.++... |. ..++.+.++|....+ +...+||+|+++--+..
T Consensus 282 ~~~~i~G~Eid~~~~~lA~~Nl~l~-gi-~~~i~i~~gDtL~~~~~~~~~fD~Iv~NPPf~~~~~~~~~~~~d~r~~~g~ 359 (544)
T 3khk_A 282 KQISVYGQESNPTTWKLAAMNMVIR-GI-DFNFGKKNADSFLDDQHPDLRADFVMTNPPFNMKDWWHEKLADDPRWTINT 359 (544)
T ss_dssp GGEEEEECCCCHHHHHHHHHHHHHT-TC-CCBCCSSSCCTTTSCSCTTCCEEEEEECCCSSCCSCCCGGGTTCGGGEECC
T ss_pred hhceEEEEeCCHHHHHHHHHHHHHh-CC-CcccceeccchhcCcccccccccEEEECCCcCCccccchhhhhhhhhhcCc
Confidence 348999999999999999988765 33 223444777765543 45678999999633221
Q ss_pred -------CCC---h-HHHHHHHHhcccCCcEEEEEeec
Q 018740 261 -------WSS---P-STGVAEISRVLRPGGVFVGTTYI 287 (351)
Q Consensus 261 -------~~d---~-~~~l~~i~~~LkpgG~li~~~~~ 287 (351)
++. . ..+++.+.+.|+|||++.+..|.
T Consensus 360 ~~~~~~~~~~~~~~~~~Fl~~~l~~Lk~gGr~aiVlP~ 397 (544)
T 3khk_A 360 NGEKRILTPPTGNANFAWMLHMLYHLAPTGSMALLLAN 397 (544)
T ss_dssp C--CEECCCCTTCTHHHHHHHHHHTEEEEEEEEEEEET
T ss_pred ccccccccCCCcchhHHHHHHHHHHhccCceEEEEecc
Confidence 111 1 26899999999999999998875
No 278
>3o4f_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, P biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli}
Probab=98.65 E-value=2.8e-07 Score=82.98 Aligned_cols=110 Identities=16% Similarity=0.291 Sum_probs=85.4
Q ss_pred CCCeEEEEcCccCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHhhh-CC-CCCCCeEEEEecCCCC-CCCCCceeeEE
Q 018740 177 LGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQE-SN-FPKENFLLVRADISRL-PFASSSIDAVH 253 (351)
Q Consensus 177 ~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~-~g-~~~~~i~~~~~d~~~l-p~~~~~fD~V~ 253 (351)
..++||-||.|.|..++.+.+..+..+|+.+|+++.+++.+++.+... .+ ...++++++.+|.... .-..++||+|+
T Consensus 83 ~pk~VLIiGgGdG~~~revlk~~~v~~v~~VEID~~Vv~~a~~~lp~~~~~~~~dpRv~v~~~Dg~~~l~~~~~~yDvIi 162 (294)
T 3o4f_A 83 HAKHVLIIGGGDGAMLREVTRHKNVESITMVEIDAGVVSFCRQYLPNHNAGSYDDPRFKLVIDDGVNFVNQTSQTFDVII 162 (294)
T ss_dssp CCCEEEEESCTTSHHHHHHHTCTTCCEEEEEESCHHHHHHHHHHCHHHHTTGGGCTTEEEEESCTTTTTSCSSCCEEEEE
T ss_pred CCCeEEEECCCchHHHHHHHHcCCcceEEEEcCCHHHHHHHHhcCccccccccCCCcEEEEechHHHHHhhccccCCEEE
Confidence 367999999999999999998866679999999999999999987532 01 1258999999998764 34467899999
Q ss_pred ecccc-----ccCCChHHHHHHHHhcccCCcEEEEEeec
Q 018740 254 AGAAI-----HCWSSPSTGVAEISRVLRPGGVFVGTTYI 287 (351)
Q Consensus 254 ~~~vl-----~h~~d~~~~l~~i~~~LkpgG~li~~~~~ 287 (351)
.-..= .++ --..+++.+++.|+|||+++.....
T Consensus 163 ~D~~dp~~~~~~L-~t~eFy~~~~~~L~p~Gv~v~q~~s 200 (294)
T 3o4f_A 163 SDCTDPIGPGESL-FTSAFYEGCKRCLNPGGIFVAQNGV 200 (294)
T ss_dssp ESCCCCCCTTCCS-SCCHHHHHHHHTEEEEEEEEEEEEE
T ss_pred EeCCCcCCCchhh-cCHHHHHHHHHHhCCCCEEEEecCC
Confidence 64321 111 1137899999999999999986554
No 279
>2oyr_A UPF0341 protein YHIQ; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Shigella flexneri 2A} SCOP: c.66.1.55 PDB: 2pgx_A 2pkw_A
Probab=98.64 E-value=2.5e-08 Score=88.62 Aligned_cols=109 Identities=16% Similarity=0.081 Sum_probs=73.8
Q ss_pred HHHhccCCCCC--CeEEEEcCccCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHhhhC-C--CC---CCCeEEEEecC
Q 018740 168 LMKGYLKPVLG--GNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQES-N--FP---KENFLLVRADI 239 (351)
Q Consensus 168 ~l~~~l~~~~~--~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~-g--~~---~~~i~~~~~d~ 239 (351)
.+.+.+...++ .+|||+|||+|..+..++..+. +|+++|+++.+.+.+++.++... + .. ..+++++++|.
T Consensus 77 ~l~~al~l~~g~~~~VLDl~~G~G~dal~lA~~g~--~V~~vE~~~~~~~l~~~~l~~a~~~~~~~~~l~~~i~~~~~D~ 154 (258)
T 2oyr_A 77 AVAKAVGIKGDYLPDVVDATAGLGRDAFVLASVGC--RVRMLERNPVVAALLDDGLARGYADAEIGGWLQERLQLIHASS 154 (258)
T ss_dssp HHHHHTTCBTTBCCCEEETTCTTCHHHHHHHHHTC--CEEEEECCHHHHHHHHHHHHHHHHCTTTHHHHHHHEEEEESCH
T ss_pred HHHHHhcccCCCCCEEEEcCCcCCHHHHHHHHcCC--EEEEEECCHHHHHHHHHHHHHHHhhHhhhhhhhcCEEEEECCH
Confidence 44555555556 8999999999999999999875 89999999988777766554220 0 00 14699999998
Q ss_pred CC-CCCCCCceeeEEeccccccCCChHHHHHHHHhcccCCc
Q 018740 240 SR-LPFASSSIDAVHAGAAIHCWSSPSTGVAEISRVLRPGG 279 (351)
Q Consensus 240 ~~-lp~~~~~fD~V~~~~vl~h~~d~~~~l~~i~~~LkpgG 279 (351)
.+ ++....+||+|++.-.+.+ .....++++..++|++.+
T Consensus 155 ~~~L~~~~~~fDvV~lDP~y~~-~~~saavkk~~~~lr~l~ 194 (258)
T 2oyr_A 155 LTALTDITPRPQVVYLDPMFPH-KQKSALVKKEMRVFQSLV 194 (258)
T ss_dssp HHHSTTCSSCCSEEEECCCCCC-CCC-----HHHHHHHHHS
T ss_pred HHHHHhCcccCCEEEEcCCCCC-cccchHHHHHHHHHHHhh
Confidence 66 3322246999999877755 333355666667776644
No 280
>3evf_A RNA-directed RNA polymerase NS5; NS5 methyltransferase, RNA CAP binding, binding, capsid protein; HET: GTA SAH; 1.45A {Yellow fever virus} SCOP: c.66.1.0 PDB: 3evb_A* 3evc_A* 3evd_A* 3eve_A* 3eva_A*
Probab=98.60 E-value=8e-08 Score=84.95 Aligned_cols=109 Identities=17% Similarity=0.129 Sum_probs=74.5
Q ss_pred cCCCCCCeEEEEcCccCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHhhhCCCCCCCeEEEEecCCCCCCCCCceeeE
Q 018740 173 LKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLPFASSSIDAV 252 (351)
Q Consensus 173 l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~g~~~~~i~~~~~d~~~lp~~~~~fD~V 252 (351)
....++.+|||+|||+|.++..+++..+...+.|+|++.++....... .. ...++.....+++...+..+.||+|
T Consensus 70 ~~l~~~~~VLDLGaAPGGWSQvAa~~~~~~~v~g~dVGvDl~~~pi~~-~~----~g~~ii~~~~~~dv~~l~~~~~DlV 144 (277)
T 3evf_A 70 GYVKLEGRVIDLGCGRGGWCYYAAAQKEVSGVKGFTLGRDGHEKPMNV-QS----LGWNIITFKDKTDIHRLEPVKCDTL 144 (277)
T ss_dssp TSSCCCEEEEEETCTTCHHHHHHHTSTTEEEEEEECCCCTTCCCCCCC-CB----TTGGGEEEECSCCTTTSCCCCCSEE
T ss_pred CCCCCCCEEEEecCCCCHHHHHHHHhcCCCcceeEEEeccCccccccc-Cc----CCCCeEEEeccceehhcCCCCccEE
Confidence 445567899999999999999988764445788999885431000000 00 0125556667666566778899999
Q ss_pred EeccccccCCCh----H---HHHHHHHhcccCC-cEEEEEeec
Q 018740 253 HAGAAIHCWSSP----S---TGVAEISRVLRPG-GVFVGTTYI 287 (351)
Q Consensus 253 ~~~~vl~h~~d~----~---~~l~~i~~~Lkpg-G~li~~~~~ 287 (351)
+|..+.+ .... . .+|+.+.++|+|| |.|++-.+.
T Consensus 145 lsD~apn-sG~~~~D~~rs~~LL~~a~~~LkpG~G~FV~KVf~ 186 (277)
T 3evf_A 145 LCDIGES-SSSSVTEGERTVRVLDTVEKWLACGVDNFCVKVLA 186 (277)
T ss_dssp EECCCCC-CSCHHHHHHHHHHHHHHHHHHHTTCCSEEEEEESC
T ss_pred EecCccC-cCchHHHHHHHHHHHHHHHHHhCCCCCeEEEEecC
Confidence 9987655 3322 1 3468888999999 999997765
No 281
>3ua3_A Protein arginine N-methyltransferase 5; TIM-barrel, rossmann fold, beta-barrel, symmetric arginine dimethylase, SAM binding; HET: SAH; 3.00A {Caenorhabditis elegans} PDB: 3ua4_A
Probab=98.59 E-value=1.4e-07 Score=93.50 Aligned_cols=101 Identities=13% Similarity=0.123 Sum_probs=71.9
Q ss_pred CCeEEEEcCccCHHHHHHHH----hC---------CCCeEEEEeCCHHHHHHHHHHHhhhCCCCCCCeEEEEecCCCCCC
Q 018740 178 GGNIIDASCGSGLFSRIFAK----SG---------LFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLPF 244 (351)
Q Consensus 178 ~~~vLDiGcG~G~~~~~l~~----~~---------~~~~v~gvD~s~~~~~~a~~~~~~~~g~~~~~i~~~~~d~~~lp~ 244 (351)
+..|||||||+|.++....+ .+ ...+|+++|-|+.++...+.+... | ....|+++.+|++++..
T Consensus 410 ~~VVldVGaGtGpLs~~al~A~~~a~~~~~~~~~~~~~kVyAVEknp~A~~~l~~~~~N--g-~~d~VtVI~gd~eev~l 486 (745)
T 3ua3_A 410 TVVIYLLGGGRGPIGTKILKSEREYNNTFRQGQESLKVKLYIVEKNPNAIVTLKYMNVR--T-WKRRVTIIESDMRSLPG 486 (745)
T ss_dssp EEEEEEESCTTCHHHHHHHHHHHHHHHHHSTTSCCCEEEEEEEECCHHHHHHHHHHHHH--T-TTTCSEEEESCGGGHHH
T ss_pred CcEEEEECCCCCHHHHHHHHHHHHhCccccccccccccEEEEEeCChHHHHHHHHHHhc--C-CCCeEEEEeCchhhccc
Confidence 45899999999999643222 22 234899999999777666655442 2 15679999999999865
Q ss_pred C-----CCceeeEEeccccccCCC---hHHHHHHHHhcccCCcEEE
Q 018740 245 A-----SSSIDAVHAGAAIHCWSS---PSTGVAEISRVLRPGGVFV 282 (351)
Q Consensus 245 ~-----~~~fD~V~~~~vl~h~~d---~~~~l~~i~~~LkpgG~li 282 (351)
+ .+++|+|++-.. -.+.+ -...|..+.+.|||||+++
T Consensus 487 p~~~~~~ekVDIIVSElm-Gsfl~nEL~pe~Ld~v~r~Lkp~Gi~i 531 (745)
T 3ua3_A 487 IAKDRGFEQPDIIVSELL-GSFGDNELSPECLDGVTGFLKPTTISI 531 (745)
T ss_dssp HHHHTTCCCCSEEEECCC-BTTBGGGSHHHHHHTTGGGSCTTCEEE
T ss_pred ccccCCCCcccEEEEecc-ccccchhccHHHHHHHHHhCCCCcEEE
Confidence 3 578999998443 22211 2357788889999999865
No 282
>3cvo_A Methyltransferase-like protein of unknown functio; rossman fold, structural genomics, joint center for structur genomics, JCSG; HET: MSE PG4; 1.80A {Silicibacter pomeroyi dss-3}
Probab=98.57 E-value=9.2e-07 Score=75.35 Aligned_cols=99 Identities=10% Similarity=0.010 Sum_probs=73.9
Q ss_pred CCCeEEEEcCccCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHhhhCCCC-CCCeEEEEecCCCC-------------
Q 018740 177 LGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFP-KENFLLVRADISRL------------- 242 (351)
Q Consensus 177 ~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~g~~-~~~i~~~~~d~~~l------------- 242 (351)
+..+|||+||| +.+..+++. +..+|+.+|.++...+.|+++++.. |.. ..+++++.+|+...
T Consensus 30 ~a~~VLEiGtG--ySTl~lA~~-~~g~VvtvE~d~~~~~~ar~~l~~~-g~~~~~~I~~~~gda~~~~~wg~p~~~~~~~ 105 (202)
T 3cvo_A 30 EAEVILEYGSG--GSTVVAAEL-PGKHVTSVESDRAWARMMKAWLAAN-PPAEGTEVNIVWTDIGPTGDWGHPVSDAKWR 105 (202)
T ss_dssp HCSEEEEESCS--HHHHHHHTS-TTCEEEEEESCHHHHHHHHHHHHHS-CCCTTCEEEEEECCCSSBCGGGCBSSSTTGG
T ss_pred CCCEEEEECch--HHHHHHHHc-CCCEEEEEeCCHHHHHHHHHHHHHc-CCCCCCceEEEEeCchhhhcccccccchhhh
Confidence 36799999984 666666664 2569999999999999999999886 210 35899999997542
Q ss_pred --C--------C-CCCceeeEEeccccccCCChHHHHHHHHhcccCCcEEEEE
Q 018740 243 --P--------F-ASSSIDAVHAGAAIHCWSSPSTGVAEISRVLRPGGVFVGT 284 (351)
Q Consensus 243 --p--------~-~~~~fD~V~~~~vl~h~~d~~~~l~~i~~~LkpgG~li~~ 284 (351)
+ . ..++||+|+.-.-. ....+..+.+.|+|||++++-
T Consensus 106 ~l~~~~~~i~~~~~~~~fDlIfIDg~k-----~~~~~~~~l~~l~~GG~Iv~D 153 (202)
T 3cvo_A 106 SYPDYPLAVWRTEGFRHPDVVLVDGRF-----RVGCALATAFSITRPVTLLFD 153 (202)
T ss_dssp GTTHHHHGGGGCTTCCCCSEEEECSSS-----HHHHHHHHHHHCSSCEEEEET
T ss_pred hHHHHhhhhhccccCCCCCEEEEeCCC-----chhHHHHHHHhcCCCeEEEEe
Confidence 1 1 23789999976531 235566677999999999764
No 283
>3ll7_A Putative methyltransferase; methytransferase, structural genomics, MCSG, PSI-2, protein initiative; HET: MSE; 1.80A {Porphyromonas gingivalis}
Probab=98.53 E-value=1.5e-07 Score=88.92 Aligned_cols=76 Identities=9% Similarity=0.110 Sum_probs=62.5
Q ss_pred CCCeEEEEcCccCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHhhhCCCCCCCeEEEEecCCCC-CC-CCCceeeEEe
Q 018740 177 LGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRL-PF-ASSSIDAVHA 254 (351)
Q Consensus 177 ~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~g~~~~~i~~~~~d~~~l-p~-~~~~fD~V~~ 254 (351)
++.+|||+|||+|..+..+++.+. +|+|+|+|+.+++.|++++.... .+..+++++++|+.+. +. ++++||+|++
T Consensus 93 ~g~~VLDLgcG~G~~al~LA~~g~--~V~~VD~s~~~l~~Ar~N~~~~~-~gl~~i~~i~~Da~~~L~~~~~~~fDvV~l 169 (410)
T 3ll7_A 93 EGTKVVDLTGGLGIDFIALMSKAS--QGIYIERNDETAVAARHNIPLLL-NEGKDVNILTGDFKEYLPLIKTFHPDYIYV 169 (410)
T ss_dssp TTCEEEESSCSSSHHHHHHHTTCS--EEEEEESCHHHHHHHHHHHHHHS-CTTCEEEEEESCGGGSHHHHHHHCCSEEEE
T ss_pred CCCEEEEeCCCchHHHHHHHhcCC--EEEEEECCHHHHHHHHHhHHHhc-cCCCcEEEEECcHHHhhhhccCCCceEEEE
Confidence 378999999999999999998875 99999999999999999987541 0136899999999874 32 2357999998
Q ss_pred c
Q 018740 255 G 255 (351)
Q Consensus 255 ~ 255 (351)
.
T Consensus 170 D 170 (410)
T 3ll7_A 170 D 170 (410)
T ss_dssp C
T ss_pred C
Confidence 5
No 284
>3s1s_A Restriction endonuclease bpusi; PD--(D/E)XK catalytic motif, gamma-N6M-adenosine methyltrans S-adenosyl-methionine binding, hydrolase; HET: SAH; 2.35A {Bacillus pumilus}
Probab=98.49 E-value=1.1e-06 Score=88.49 Aligned_cols=132 Identities=13% Similarity=0.021 Sum_probs=89.6
Q ss_pred cCCCCCcHHHHHHHHhc----cCC--CCCCeEEEEcCccCHHHHHHHHhCC---CCeEEEEeCCHHHHHHH--HHHHhhh
Q 018740 156 WGGFPGPEKEFELMKGY----LKP--VLGGNIIDASCGSGLFSRIFAKSGL---FSLVVALDYSENMLKQC--YEFVQQE 224 (351)
Q Consensus 156 ~~~~~~~~~~~~~l~~~----l~~--~~~~~vLDiGcG~G~~~~~l~~~~~---~~~v~gvD~s~~~~~~a--~~~~~~~ 224 (351)
.+.++.+....+.+... +.. .++.+|||.|||+|.++..+++..+ ..+++|+|+++.+++.| +.++..+
T Consensus 294 ~GqFYTP~eLA~lMVeLA~ill~~~l~~g~rVLDPaCGSG~FLIaaA~~l~ei~~~~IyGvEIDp~Al~LAK~RlNL~lN 373 (878)
T 3s1s_A 294 EGVVPTDIELGKVLSIISQHILGRPLTEDEVISDPAAGSGNLLATVSAGFNNVMPRQIWANDIETLFLELLSIRLGLLFP 373 (878)
T ss_dssp CBSSSCCHHHHHHHHHHHHHHHCSCCCTTCEEEETTCTTSHHHHHHHHTSTTCCGGGEEEECSCGGGHHHHHHHHHTTST
T ss_pred CceEcCCHHHHHHHHHHHhhhccccCCCCCEEEECCCCccHHHHHHHHHhcccCCCeEEEEECCHHHHHHHHHHHHHHHh
Confidence 45577788887777666 332 3577999999999999999988753 35799999999999999 4433221
Q ss_pred C-CCCCCCeEEEEecCCCC-CCCCCceeeEEecccccc-CC---------------------------C-hHHHHHHHHh
Q 018740 225 S-NFPKENFLLVRADISRL-PFASSSIDAVHAGAAIHC-WS---------------------------S-PSTGVAEISR 273 (351)
Q Consensus 225 ~-g~~~~~i~~~~~d~~~l-p~~~~~fD~V~~~~vl~h-~~---------------------------d-~~~~l~~i~~ 273 (351)
. ..+.....+...|+... +...+.||+|+++=-.-. .. + ...+++.+.+
T Consensus 374 ~LlhGi~~~~I~~dD~L~~~~~~~~kFDVVIgNPPYg~~~~~~~e~kd~~~r~~~g~p~~p~s~~G~~DLy~aFIe~Al~ 453 (878)
T 3s1s_A 374 QLVSSNNAPTITGEDVCSLNPEDFANVSVVVMNPPYVSGVTDPAIKRKFAHKIIQLTGNRPQTLFGQIGVEALFLELVTE 453 (878)
T ss_dssp TTCBTTBCCEEECCCGGGCCGGGGTTEEEEEECCBCCSSCCCHHHHHHHHHHHHHHHSSCCSSCSSSCCHHHHHHHHHHH
T ss_pred hhhcCCCcceEEecchhcccccccCCCCEEEECCCccccccchhhhhhHHHHhhhhccccccccccccchHHHHHHHHHH
Confidence 0 00112234555565543 234578999999743311 11 1 1246788999
Q ss_pred cccCCcEEEEEeec
Q 018740 274 VLRPGGVFVGTTYI 287 (351)
Q Consensus 274 ~LkpgG~li~~~~~ 287 (351)
.|+|||++.+..|.
T Consensus 454 lLKpGGrLAfIlP~ 467 (878)
T 3s1s_A 454 LVQDGTVISAIMPK 467 (878)
T ss_dssp HSCTTCEEEEEEET
T ss_pred hcCCCcEEEEEECh
Confidence 99999999998886
No 285
>3gcz_A Polyprotein; flavivirus, RNA capping, methyltransferase, viral enzyme STR ATP-binding, nucleotide-binding, RNA replication, structura genomics; HET: SAM; 1.70A {Yokose virus}
Probab=98.34 E-value=2.7e-07 Score=81.72 Aligned_cols=115 Identities=13% Similarity=0.018 Sum_probs=74.5
Q ss_pred HHHHHhccCCCCCCeEEEEcCccCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHhhhCCCCCCCeEEEEecCCCCCCC
Q 018740 166 FELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLPFA 245 (351)
Q Consensus 166 ~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~g~~~~~i~~~~~d~~~lp~~ 245 (351)
.+....+ ...++.+|||+|||+|.++..+++..+...|+|+|++..+...+... ... ..++.....+.....++
T Consensus 80 ~ei~eK~-~Lk~~~~VLDLGaAPGGWsQvAa~~~gv~sV~GvdvG~d~~~~pi~~-~~~----g~~ii~~~~~~dv~~l~ 153 (282)
T 3gcz_A 80 RWMEERG-YVKPTGIVVDLGCGRGGWSYYAASLKNVKKVMAFTLGVQGHEKPIMR-TTL----GWNLIRFKDKTDVFNME 153 (282)
T ss_dssp HHHHHTT-SCCCCEEEEEETCTTCHHHHHHHTSTTEEEEEEECCCCTTSCCCCCC-CBT----TGGGEEEECSCCGGGSC
T ss_pred HHHHHhc-CCCCCCEEEEeCCCCCHHHHHHHHhcCCCeeeeEEeccCcccccccc-ccC----CCceEEeeCCcchhhcC
Confidence 3333443 55678899999999999999988765556789999986532211100 000 12333344333333345
Q ss_pred CCceeeEEeccccccCCChH-------HHHHHHHhcccCC--cEEEEEeec
Q 018740 246 SSSIDAVHAGAAIHCWSSPS-------TGVAEISRVLRPG--GVFVGTTYI 287 (351)
Q Consensus 246 ~~~fD~V~~~~vl~h~~d~~-------~~l~~i~~~Lkpg--G~li~~~~~ 287 (351)
...+|+|+|..+.. ..... .+|.-+.++|+|| |.|++-.+.
T Consensus 154 ~~~~DvVLSDmApn-sG~~~~D~~rs~~LL~~A~~~Lk~g~~G~Fv~KvF~ 203 (282)
T 3gcz_A 154 VIPGDTLLCDIGES-SPSIAVEEQRTLRVLNCAKQWLQEGNYTEFCIKVLC 203 (282)
T ss_dssp CCCCSEEEECCCCC-CSCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEESC
T ss_pred CCCcCEEEecCccC-CCChHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEec
Confidence 78899999987766 43321 3466667899999 999997776
No 286
>4fzv_A Putative methyltransferase NSUN4; mterf fold, methyltransferase fold, rRNA methyltransferase, mitochondria, transferase; HET: MSE SAM; 2.00A {Homo sapiens} PDB: 4fp9_A*
Probab=98.29 E-value=2.7e-06 Score=79.03 Aligned_cols=121 Identities=15% Similarity=0.062 Sum_probs=92.0
Q ss_pred HHHhccCCCCCCeEEEEcCccCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHhhhCCC----CCCCeEEEEecCCCCC
Q 018740 168 LMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNF----PKENFLLVRADISRLP 243 (351)
Q Consensus 168 ~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~g~----~~~~i~~~~~d~~~lp 243 (351)
.....+.+.++.+|||+.+|.|.=+..+++.+....++++|+++.-++..++++... +. ...++.+...|...++
T Consensus 139 l~~~~L~~~pg~~VLD~CAaPGGKT~~la~~~~~~~l~A~D~~~~R~~~l~~~l~r~-~~~~~~~~~~v~v~~~D~~~~~ 217 (359)
T 4fzv_A 139 LPVLALGLQPGDIVLDLCAAPGGKTLALLQTGCCRNLAANDLSPSRIARLQKILHSY-VPEEIRDGNQVRVTSWDGRKWG 217 (359)
T ss_dssp HHHHHHCCCTTEEEEESSCTTCHHHHHHHHTTCEEEEEEECSCHHHHHHHHHHHHHH-SCTTTTTSSSEEEECCCGGGHH
T ss_pred HHHHHhCCCCCCEEEEecCCccHHHHHHHHhcCCCcEEEEcCCHHHHHHHHHHHHHh-hhhhhccCCceEEEeCchhhcc
Confidence 345567788899999999999999999998877678999999999999999888765 21 1257888888887764
Q ss_pred -CCCCceeeEEe----cc----ccccCCC----------------hHHHHHHHHhcccCCcEEEEEeeccC
Q 018740 244 -FASSSIDAVHA----GA----AIHCWSS----------------PSTGVAEISRVLRPGGVFVGTTYIVD 289 (351)
Q Consensus 244 -~~~~~fD~V~~----~~----vl~h~~d----------------~~~~l~~i~~~LkpgG~li~~~~~~~ 289 (351)
...+.||.|++ ++ ++..-++ ...+|..+.+.|||||+|+.+|-...
T Consensus 218 ~~~~~~fD~VLlDaPCSg~g~g~~r~~~~~~~~~~~~~~~~l~~lQ~~iL~~a~~~lkpGG~LVYsTCSl~ 288 (359)
T 4fzv_A 218 ELEGDTYDRVLVDVPCTTDRHSLHEEENNIFKRSRKKERQILPVLQVQLLAAGLLATKPGGHVVYSTCSLS 288 (359)
T ss_dssp HHSTTCEEEEEEECCCCCHHHHTTCCTTCTTSGGGHHHHHTHHHHHHHHHHHHHHTEEEEEEEEEEESCCC
T ss_pred hhccccCCEEEECCccCCCCCcccccChhhhhhCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEEEEeCCCc
Confidence 34578999994 32 2211111 13678889999999999999887654
No 287
>4auk_A Ribosomal RNA large subunit methyltransferase M; YGDE; HET: TLA PGE; 1.90A {Escherichia coli} PDB: 4atn_A* 4b17_A*
Probab=98.28 E-value=2.3e-06 Score=79.13 Aligned_cols=88 Identities=17% Similarity=0.178 Sum_probs=69.7
Q ss_pred CCCCCeEEEEcCccCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHhhhCCCCCCCeEEEEecCCCCCCCCCceeeEEe
Q 018740 175 PVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLPFASSSIDAVHA 254 (351)
Q Consensus 175 ~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~g~~~~~i~~~~~d~~~lp~~~~~fD~V~~ 254 (351)
..+|.++||+||++|.++..+.+++. .|++||+.+ |-..... .+++.++++|......+.+.+|+|+|
T Consensus 209 l~~G~~vlDLGAaPGGWT~~l~~rg~--~V~aVD~~~-l~~~l~~---------~~~V~~~~~d~~~~~~~~~~~D~vvs 276 (375)
T 4auk_A 209 LANGMWAVDLGACPGGWTYQLVKRNM--WVYSVDNGP-MAQSLMD---------TGQVTWLREDGFKFRPTRSNISWMVC 276 (375)
T ss_dssp SCTTCEEEEETCTTCHHHHHHHHTTC--EEEEECSSC-CCHHHHT---------TTCEEEECSCTTTCCCCSSCEEEEEE
T ss_pred CCCCCEEEEeCcCCCHHHHHHHHCCC--EEEEEEhhh-cChhhcc---------CCCeEEEeCccccccCCCCCcCEEEE
Confidence 35688999999999999999999975 999999875 2222222 58999999999888777788999999
Q ss_pred ccccccCCChHHHHHHHHhcccCC
Q 018740 255 GAAIHCWSSPSTGVAEISRVLRPG 278 (351)
Q Consensus 255 ~~vl~h~~d~~~~l~~i~~~Lkpg 278 (351)
-.+ .+|...++-+.+.|..+
T Consensus 277 Dm~----~~p~~~~~l~~~wl~~~ 296 (375)
T 4auk_A 277 DMV----EKPAKVAALMAQWLVNG 296 (375)
T ss_dssp CCS----SCHHHHHHHHHHHHHTT
T ss_pred cCC----CChHHhHHHHHHHHhcc
Confidence 665 46777777777776665
No 288
>2jny_A Uncharacterized BCR; structure, CGR1, NESG, structural genomics, PSI-2, protein structure initiative; NMR {Corynebacterium glutamicum} SCOP: b.171.1.1
Probab=98.25 E-value=3.8e-07 Score=62.69 Aligned_cols=47 Identities=19% Similarity=0.169 Sum_probs=39.9
Q ss_pred ccCCCceeCCCCCCCcccccCCCcccccccCCccccccccccccccCceeeecccC
Q 018740 66 STSKNVLACPICYKPLTWIGDSSLSIESAAGSSLQCNTCKKTYSGVGTHFDMTAAS 121 (351)
Q Consensus 66 ~~~~~~l~CP~C~~~l~~~~~~~~~~~~~~~~~~~C~~C~~~~~~~~g~~~~~~~~ 121 (351)
..-+++|+||.|+++|.... ..+.+.|+.|+..|++++|++.++.+.
T Consensus 5 ~~LLeiL~CP~ck~~L~~~~---------~~g~LvC~~c~~~YPI~dGIPvmL~~E 51 (67)
T 2jny_A 5 PQLLEVLACPKDKGPLRYLE---------SEQLLVNERLNLAYRIDDGIPVLLIDE 51 (67)
T ss_dssp GGGTCCCBCTTTCCBCEEET---------TTTEEEETTTTEEEEEETTEECCCSSC
T ss_pred HHHHHHhCCCCCCCcCeEeC---------CCCEEEcCCCCccccCCCCEeeeChhH
Confidence 34578899999999987754 347899999999999999999998763
No 289
>2wk1_A NOVP; transferase, O-methyltransferase, novobiocin, TYLF superfamily; HET: SAH; 1.40A {Streptomyces caeruleus}
Probab=98.23 E-value=3.4e-06 Score=75.68 Aligned_cols=108 Identities=10% Similarity=0.100 Sum_probs=79.4
Q ss_pred CCCCeEEEEcCccCHHHHHHHHhC-----CCCeEEEEeCCHH--------------------------HHHHHHHHHhhh
Q 018740 176 VLGGNIIDASCGSGLFSRIFAKSG-----LFSLVVALDYSEN--------------------------MLKQCYEFVQQE 224 (351)
Q Consensus 176 ~~~~~vLDiGcG~G~~~~~l~~~~-----~~~~v~gvD~s~~--------------------------~~~~a~~~~~~~ 224 (351)
..++.|||+|+..|..+..++... ++.+++++|..+. .++.++++++..
T Consensus 105 ~~pg~IlEiGv~~G~Sai~ma~~l~~~g~~~~kI~~~DtfeG~pe~~~~~~~~d~~~~~~~~~~~~~~~~~~ar~n~~~~ 184 (282)
T 2wk1_A 105 NVPGDLVETGVWRGGACILMRGILRAHDVRDRTVWVADSFQGIPDVGEDGYAGDRKMALHRRNSVLAVSEEEVRRNFRNY 184 (282)
T ss_dssp TCCCEEEEECCTTSHHHHHHHHHHHHTTCCSCCEEEEECSSCSCCCCTTSCHHHHHHCGGGGHHHHCCCHHHHHHHHHHT
T ss_pred CCCCcEEEeecCchHHHHHHHHHhHhcCCCCCEEEEEECCCCCCcccccccccccccccccccccchhHHHHHHHHHHHc
Confidence 446799999999999888776542 3568999996421 366788888776
Q ss_pred CCCCCCCeEEEEecCCC-CC-CCCCceeeEEeccccccCCChHHHHHHHHhcccCCcEEEEEee
Q 018740 225 SNFPKENFLLVRADISR-LP-FASSSIDAVHAGAAIHCWSSPSTGVAEISRVLRPGGVFVGTTY 286 (351)
Q Consensus 225 ~g~~~~~i~~~~~d~~~-lp-~~~~~fD~V~~~~vl~h~~d~~~~l~~i~~~LkpgG~li~~~~ 286 (351)
|...++++++.+|+.+ +| .+.++||+|+.-.-.+ ......|+.+...|+|||++++-..
T Consensus 185 -gl~~~~I~li~Gda~etL~~~~~~~~d~vfIDaD~y--~~~~~~Le~~~p~L~pGGiIv~DD~ 245 (282)
T 2wk1_A 185 -DLLDEQVRFLPGWFKDTLPTAPIDTLAVLRMDGDLY--ESTWDTLTNLYPKVSVGGYVIVDDY 245 (282)
T ss_dssp -TCCSTTEEEEESCHHHHSTTCCCCCEEEEEECCCSH--HHHHHHHHHHGGGEEEEEEEEESSC
T ss_pred -CCCcCceEEEEeCHHHHHhhCCCCCEEEEEEcCCcc--ccHHHHHHHHHhhcCCCEEEEEcCC
Confidence 4324789999999854 44 3357899999765321 1234779999999999999998543
No 290
>2jr6_A UPF0434 protein NMA0874; solution, structural genomics, PSI, structure initiative, northeast structural genomics consort NESG; NMR {Neisseria meningitidis}
Probab=98.22 E-value=4.7e-07 Score=62.54 Aligned_cols=46 Identities=17% Similarity=0.183 Sum_probs=39.3
Q ss_pred cCCCceeCCCCCCCcccccCCCcccccccCCccccccccccccccCceeeecccC
Q 018740 67 TSKNVLACPICYKPLTWIGDSSLSIESAAGSSLQCNTCKKTYSGVGTHFDMTAAS 121 (351)
Q Consensus 67 ~~~~~l~CP~C~~~l~~~~~~~~~~~~~~~~~~~C~~C~~~~~~~~g~~~~~~~~ 121 (351)
.-+++|+||.|+++|.... ..+.+.|+.|+..|++++|++.++.+.
T Consensus 4 ~LL~iL~CP~ck~~L~~~~---------~~~~LiC~~cg~~YPI~dGIPvmL~~E 49 (68)
T 2jr6_A 4 KFLDILVCPVTKGRLEYHQ---------DKQELWSRQAKLAYPIKDGIPYMLENE 49 (68)
T ss_dssp SSSCCCBCSSSCCBCEEET---------TTTEEEETTTTEEEEEETTEECCCTTT
T ss_pred HHhhheECCCCCCcCeEeC---------CCCEEEcCCCCcEecCCCCeeeeChhh
Confidence 4578899999999987753 347899999999999999999998753
No 291
>2js4_A UPF0434 protein BB2007; NESG, northeast structural genomics consortium, beta, PSI-2, protein structure initiative; NMR {Bordetella bronchiseptica RB50}
Probab=98.19 E-value=5e-07 Score=62.78 Aligned_cols=46 Identities=24% Similarity=0.389 Sum_probs=39.4
Q ss_pred cCCCceeCCCCCCCcccccCCCcccccccCCccccccccccccccCceeeecccC
Q 018740 67 TSKNVLACPICYKPLTWIGDSSLSIESAAGSSLQCNTCKKTYSGVGTHFDMTAAS 121 (351)
Q Consensus 67 ~~~~~l~CP~C~~~l~~~~~~~~~~~~~~~~~~~C~~C~~~~~~~~g~~~~~~~~ 121 (351)
.-+++|+||.|+++|.... ..+.+.|+.|+..|++++|++.++.+.
T Consensus 4 ~LL~iL~CP~ck~~L~~~~---------~~~~LiC~~cg~~YPI~dGIPvmL~~E 49 (70)
T 2js4_A 4 RLLDILVCPVCKGRLEFQR---------AQAELVCNADRLAFPVRDGVPIMLEAE 49 (70)
T ss_dssp CCCCCCBCTTTCCBEEEET---------TTTEEEETTTTEEEEEETTEECCCGGG
T ss_pred HHhhheECCCCCCcCEEeC---------CCCEEEcCCCCceecCCCCeeeeChhh
Confidence 4578899999999987754 247899999999999999999998763
No 292
>2pk7_A Uncharacterized protein; NESG, PLR1, putative tetraacyldisaccharide-1-P 4-kinase, Q4K structural genomics, PSI-2; 2.20A {Pseudomonas fluorescens} SCOP: b.171.1.1
Probab=98.17 E-value=5.6e-07 Score=62.34 Aligned_cols=46 Identities=24% Similarity=0.327 Sum_probs=39.0
Q ss_pred cCCCceeCCCCCCCcccccCCCcccccccCCccccccccccccccCceeeecccC
Q 018740 67 TSKNVLACPICYKPLTWIGDSSLSIESAAGSSLQCNTCKKTYSGVGTHFDMTAAS 121 (351)
Q Consensus 67 ~~~~~l~CP~C~~~l~~~~~~~~~~~~~~~~~~~C~~C~~~~~~~~g~~~~~~~~ 121 (351)
.-+++|+||.|+++|.... ..+.+.|+.|+..|++++|++.++...
T Consensus 4 ~LLeiL~CP~ck~~L~~~~---------~~~~LiC~~cg~~YPI~dGIPvmL~~e 49 (69)
T 2pk7_A 4 KLLDILACPICKGPLKLSA---------DKTELISKGAGLAYPIRDGIPVMLESE 49 (69)
T ss_dssp CGGGTCCCTTTCCCCEECT---------TSSEEEETTTTEEEEEETTEECCCGGG
T ss_pred HHHhheeCCCCCCcCeEeC---------CCCEEEcCCCCcEecCcCCeeeeChhh
Confidence 3467899999999988653 247899999999999999999998753
No 293
>1wg8_A Predicted S-adenosylmethionine-dependent methyltransferase; S-adenosyl-methyltransferase, MRAW; HET: SAM; 2.00A {Thermus thermophilus} SCOP: a.60.13.1 c.66.1.23
Probab=98.17 E-value=4.6e-06 Score=74.15 Aligned_cols=81 Identities=17% Similarity=0.256 Sum_probs=66.7
Q ss_pred HHHHHhccCCCCCCeEEEEcCccCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHhhhCCCCCCCeEEEEecCCCCC--
Q 018740 166 FELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLP-- 243 (351)
Q Consensus 166 ~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~g~~~~~i~~~~~d~~~lp-- 243 (351)
.+.+.+.+...+++.+||.+||.|..+..+++. ..+|+|+|.++.+++.+++ +.. .++.++++++.+++
T Consensus 11 l~e~le~L~~~~gg~~VD~T~G~GGHS~~il~~--~g~VigiD~Dp~Ai~~A~~-L~~------~rv~lv~~~f~~l~~~ 81 (285)
T 1wg8_A 11 YQEALDLLAVRPGGVYVDATLGGAGHARGILER--GGRVIGLDQDPEAVARAKG-LHL------PGLTVVQGNFRHLKRH 81 (285)
T ss_dssp HHHHHHHHTCCTTCEEEETTCTTSHHHHHHHHT--TCEEEEEESCHHHHHHHHH-TCC------TTEEEEESCGGGHHHH
T ss_pred HHHHHHhhCCCCCCEEEEeCCCCcHHHHHHHHC--CCEEEEEeCCHHHHHHHHh-hcc------CCEEEEECCcchHHHH
Confidence 455666777778899999999999999999998 3599999999999999998 532 58999999998874
Q ss_pred ---CCCCceeeEEec
Q 018740 244 ---FASSSIDAVHAG 255 (351)
Q Consensus 244 ---~~~~~fD~V~~~ 255 (351)
...+++|.|++.
T Consensus 82 L~~~g~~~vDgIL~D 96 (285)
T 1wg8_A 82 LAALGVERVDGILAD 96 (285)
T ss_dssp HHHTTCSCEEEEEEE
T ss_pred HHHcCCCCcCEEEeC
Confidence 123579999974
No 294
>2hf1_A Tetraacyldisaccharide-1-P 4-kinase; LPXK, lipid A biosynthes structural genomics, PSI-2, protein structure initiative; 1.90A {Chromobacterium violaceum} SCOP: b.171.1.1
Probab=98.17 E-value=4.5e-07 Score=62.63 Aligned_cols=46 Identities=20% Similarity=0.359 Sum_probs=39.1
Q ss_pred cCCCceeCCCCCCCcccccCCCcccccccCCccccccccccccccCceeeecccC
Q 018740 67 TSKNVLACPICYKPLTWIGDSSLSIESAAGSSLQCNTCKKTYSGVGTHFDMTAAS 121 (351)
Q Consensus 67 ~~~~~l~CP~C~~~l~~~~~~~~~~~~~~~~~~~C~~C~~~~~~~~g~~~~~~~~ 121 (351)
.-+++|+||.|+++|.... ..+.+.|+.|+..|++++|++.++.+.
T Consensus 4 ~LL~iL~CP~ck~~L~~~~---------~~~~LiC~~cg~~YPI~dGIPvmL~~E 49 (68)
T 2hf1_A 4 KFLEILVCPLCKGPLVFDK---------SKDELICKGDRLAFPIKDGIPMMLESE 49 (68)
T ss_dssp CCEEECBCTTTCCBCEEET---------TTTEEEETTTTEEEEEETTEECCCGGG
T ss_pred HHhhheECCCCCCcCeEeC---------CCCEEEcCCCCcEecCCCCeeeeChhh
Confidence 3467899999999987754 357899999999999999999998753
No 295
>3ufb_A Type I restriction-modification system methyltran subunit; methyltransferase activity, transferase; 1.80A {Vibrio vulnificus}
Probab=98.16 E-value=2.1e-05 Score=77.02 Aligned_cols=145 Identities=18% Similarity=0.166 Sum_probs=101.8
Q ss_pred Chhhhhhhhhhhhhh----hcCCCCCcHHHHHHHHhccCCCCCCeEEEEcCccCHHHHHHHHhC-------------CCC
Q 018740 140 PFMSFIYERGWRQNF----VWGGFPGPEKEFELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSG-------------LFS 202 (351)
Q Consensus 140 ~~~~~~~~~~~r~~~----~~~~~~~~~~~~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~-------------~~~ 202 (351)
+..+..|+...++.. ..+.|+.|....+.+.+.+.+.++.+|+|-+||+|.++..+.+.. ...
T Consensus 176 d~lG~~yE~ll~~~~~~~g~~GqfyTP~~Vv~lmv~l~~p~~~~~I~DPacGsGgfL~~a~~~l~~~~~~~~~~~~~~~~ 255 (530)
T 3ufb_A 176 HTLSRLYETMLREMRDAAGDSGEFYTPRPVVRFMVEVMDPQLGESVLDPACGTGGFLVEAFEHLERQCKTVEDREVLQES 255 (530)
T ss_dssp HHHHHHHHHHHHHHTTSSSSCCCCCCCHHHHHHHHHHHCCCTTCCEEETTCTTTHHHHHHHHHHHTTCCSHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHHHHhcCcCceECCcHHHHHHHHHhhccCCCCEEEeCCCCcchHHHHHHHHHHHhccchhHHHHHhhh
Confidence 344555665443321 234588999999999999999889999999999999987765431 123
Q ss_pred eEEEEeCCHHHHHHHHHHHhhhCCCCCCCeEEEEecCCCCCC----CCCceeeEEeccccc---------cCC------C
Q 018740 203 LVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLPF----ASSSIDAVHAGAAIH---------CWS------S 263 (351)
Q Consensus 203 ~v~gvD~s~~~~~~a~~~~~~~~g~~~~~i~~~~~d~~~lp~----~~~~fD~V~~~~vl~---------h~~------d 263 (351)
.++|+|+++.+...|+-++... |. ....+..+|....|. ....||+|+++--+. .++ +
T Consensus 256 ~i~G~E~~~~~~~la~mNl~lh-g~--~~~~I~~~dtL~~~~~~~~~~~~fD~Il~NPPf~~~~~~~~~~~~~~~~~~~~ 332 (530)
T 3ufb_A 256 SIFGGEAKSLPYLLVQMNLLLH-GL--EYPRIDPENSLRFPLREMGDKDRVDVILTNPPFGGEEEKGILGNFPEDMQTAE 332 (530)
T ss_dssp CEEEECCSHHHHHHHHHHHHHH-TC--SCCEEECSCTTCSCGGGCCGGGCBSEEEECCCSSCBCCHHHHTTSCGGGCCCB
T ss_pred hhhhhhccHHHHHHHHHHHHhc-CC--ccccccccccccCchhhhcccccceEEEecCCCCccccccccccCchhcccch
Confidence 6999999999999999877665 33 334566777655442 235799999874431 111 1
Q ss_pred h-HHHHHHHHhccc-------CCcEEEEEeec
Q 018740 264 P-STGVAEISRVLR-------PGGVFVGTTYI 287 (351)
Q Consensus 264 ~-~~~l~~i~~~Lk-------pgG~li~~~~~ 287 (351)
. ..+++.+.+.|| |||++.+..|.
T Consensus 333 ~~~~Fl~~~l~~Lk~~~~~l~~gGr~avVlP~ 364 (530)
T 3ufb_A 333 TAMLFLQLIMRKLKRPGHGSDNGGRAAVVVPN 364 (530)
T ss_dssp HHHHHHHHHHHHBCCTTSSSSSCCEEEEEEEH
T ss_pred hHHHHHHHHHHHhhhhhhccCCCceEEEEecc
Confidence 1 256777778776 79999998885
No 296
>2kpi_A Uncharacterized protein SCO3027; zinc finger, PSI-2, NESG, all beta, structural genomics, protein structure initiative; NMR {Streptomyces coelicolor}
Probab=98.03 E-value=2.5e-06 Score=56.58 Aligned_cols=45 Identities=24% Similarity=0.424 Sum_probs=38.5
Q ss_pred ccCCCceeCCCCCCCcccccCCCcccccccCCccccc--cccccccccCceeeecccC
Q 018740 66 STSKNVLACPICYKPLTWIGDSSLSIESAAGSSLQCN--TCKKTYSGVGTHFDMTAAS 121 (351)
Q Consensus 66 ~~~~~~l~CP~C~~~l~~~~~~~~~~~~~~~~~~~C~--~C~~~~~~~~g~~~~~~~~ 121 (351)
..-+++|+||.|+++|.... +.+.|+ .|+..|++++|++.++.+.
T Consensus 5 ~~lL~iL~CP~c~~~L~~~~-----------~~L~C~~~~c~~~YPI~dGIPvlL~~e 51 (56)
T 2kpi_A 5 AGLLEILACPACHAPLEERD-----------AELICTGQDCGLAYPVRDGIPVLLVDE 51 (56)
T ss_dssp CSCTTSCCCSSSCSCEEEET-----------TEEEECSSSCCCEEEEETTEECCCTTT
T ss_pred HHHHhheeCCCCCCcceecC-----------CEEEcCCcCCCcEEeeECCEeeeCHHH
Confidence 34678899999999987653 789999 9999999999999997653
No 297
>3c6k_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC, phosphoprotein; HET: SPD MTA; 1.95A {Homo sapiens} PDB: 3c6m_A*
Probab=98.02 E-value=9.8e-06 Score=75.23 Aligned_cols=108 Identities=13% Similarity=0.194 Sum_probs=78.3
Q ss_pred CCCeEEEEcCccCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHhhhCC-----CCCCCeEEEEecCCCC----CCCCC
Q 018740 177 LGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESN-----FPKENFLLVRADISRL----PFASS 247 (351)
Q Consensus 177 ~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~g-----~~~~~i~~~~~d~~~l----p~~~~ 247 (351)
++++||=||.|.|..++.+.+.. ..+|+.+|+++.+++.+++.+....+ ...++++++.+|.... .-..+
T Consensus 205 ~pkrVLIIGgGdG~~~revlkh~-~~~V~~VEIDp~VVe~ar~yfp~~~~~~~d~pr~~rv~vii~Da~~fl~~~~~~~~ 283 (381)
T 3c6k_A 205 TGKDVLILGGGDGGILCEIVKLK-PKMVTMVEIDQMVIDGCKKYMRKTCGDVLDNLKGDCYQVLIEDCIPVLKRYAKEGR 283 (381)
T ss_dssp TTCEEEEEECTTCHHHHHHHTTC-CSEEEEEESCHHHHHHHHHHCCC----CCSSSEETTEEEEESCHHHHHHHHHHHTC
T ss_pred CCCeEEEECCCcHHHHHHHHhcC-CceeEEEccCHHHHHHHHhhchhhhhhhhccccccceeeehHHHHHHHHhhhhccC
Confidence 46799999999999999999865 47999999999999999998643200 0124688999997542 12346
Q ss_pred ceeeEEecccccc-CCCh---------HHHHHHHHhcccCCcEEEEEe
Q 018740 248 SIDAVHAGAAIHC-WSSP---------STGVAEISRVLRPGGVFVGTT 285 (351)
Q Consensus 248 ~fD~V~~~~vl~h-~~d~---------~~~l~~i~~~LkpgG~li~~~ 285 (351)
+||+|+.-..-.. -.+| ..+++.+++.|+|||+++...
T Consensus 284 ~yDvIIvDl~D~~~s~~p~g~a~~Lft~eFy~~~~~~L~p~GVlv~Q~ 331 (381)
T 3c6k_A 284 EFDYVINDLTAVPISTSPEEDSTWEFLRLILDLSMKVLKQDGKYFTQG 331 (381)
T ss_dssp CEEEEEEECCSSCCCCC----CHHHHHHHHHHHHHHTEEEEEEEEEEE
T ss_pred ceeEEEECCCCCcccCcccCcchHHHHHHHHHHHHHhcCCCCEEEEec
Confidence 7999997422111 1122 367888999999999998754
No 298
>3eld_A Methyltransferase; flavivirus, RNA capping, guanylyltransfer viral enzyme structure; HET: SFG; 1.90A {Wesselsbron virus} PDB: 3elu_A* 3elw_A* 3ely_A* 3emb_A* 3emd_A*
Probab=98.01 E-value=7.9e-06 Score=72.81 Aligned_cols=107 Identities=14% Similarity=0.123 Sum_probs=68.2
Q ss_pred CCCCCeEEEEcCccCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHhhhCCCCCCCeEEEEecCCCCCCCCCceeeEEe
Q 018740 175 PVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLPFASSSIDAVHA 254 (351)
Q Consensus 175 ~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~g~~~~~i~~~~~d~~~lp~~~~~fD~V~~ 254 (351)
..++.+|||+||++|.|+..+++......|.|+|+...+...... ... ...++.....+.....+..+.+|+|+|
T Consensus 79 ~~~g~~vlDLGaaPGgWsqva~~~~gv~sV~Gvdlg~~~~~~P~~-~~~----~~~~iv~~~~~~di~~l~~~~~DlVls 153 (300)
T 3eld_A 79 LRITGRVLDLGCGRGGWSYYAAAQKEVMSVKGYTLGIEGHEKPIH-MQT----LGWNIVKFKDKSNVFTMPTEPSDTLLC 153 (300)
T ss_dssp CCCCEEEEEETCTTCHHHHHHHTSTTEEEEEEECCCCTTSCCCCC-CCB----TTGGGEEEECSCCTTTSCCCCCSEEEE
T ss_pred CCCCCEEEEcCCCCCHHHHHHHHhcCCceeeeEEecccccccccc-ccc----cCCceEEeecCceeeecCCCCcCEEee
Confidence 346789999999999999999986544578999997542110000 000 011222233322222344678999999
Q ss_pred ccccccCCCh-------HHHHHHHHhcccCC-cEEEEEeec
Q 018740 255 GAAIHCWSSP-------STGVAEISRVLRPG-GVFVGTTYI 287 (351)
Q Consensus 255 ~~vl~h~~d~-------~~~l~~i~~~Lkpg-G~li~~~~~ 287 (351)
..+.. ...+ ..+|.-+.++|+|| |.|++-.+.
T Consensus 154 D~APn-sG~~~~D~~rs~~LL~~A~~~LkpG~G~FV~KvF~ 193 (300)
T 3eld_A 154 DIGES-SSNPLVERDRTMKVLENFERWKHVNTENFCVKVLA 193 (300)
T ss_dssp CCCCC-CSSHHHHHHHHHHHHHHHHHHCCTTCCEEEEEESS
T ss_pred cCcCC-CCCHHHHHHHHHHHHHHHHHHhcCCCCcEEEEecc
Confidence 76655 3332 24466677899999 999998765
No 299
>2k4m_A TR8_protein, UPF0146 protein MTH_1000; alpha+beta, rossman fold, structural genomics, PSI-2; NMR {Methanothermobacterthermautotrophicus str}
Probab=98.00 E-value=1.8e-05 Score=63.08 Aligned_cols=97 Identities=12% Similarity=0.102 Sum_probs=65.9
Q ss_pred HHHHHhccCCCCCCeEEEEcCccC-HHHHHHHH-hCCCCeEEEEeCCHHHHHHHHHHHhhhCCCCCCCeEEEEecCCCCC
Q 018740 166 FELMKGYLKPVLGGNIIDASCGSG-LFSRIFAK-SGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLP 243 (351)
Q Consensus 166 ~~~l~~~l~~~~~~~vLDiGcG~G-~~~~~l~~-~~~~~~v~gvD~s~~~~~~a~~~~~~~~g~~~~~i~~~~~d~~~lp 243 (351)
.+.+.+... ++.+|||||||.| ..+..|++ .+. .|+++|+++..+ .+++.|+.+..
T Consensus 26 aeYI~~~~~--~~~rVlEVG~G~g~~vA~~La~~~g~--~V~atDInp~Av------------------~~v~dDiF~P~ 83 (153)
T 2k4m_A 26 AVYIIRCSG--PGTRVVEVGAGRFLYVSDYIRKHSKV--DLVLTDIKPSHG------------------GIVRDDITSPR 83 (153)
T ss_dssp HHHHHHHSC--SSSEEEEETCTTCCHHHHHHHHHSCC--EEEEECSSCSST------------------TEECCCSSSCC
T ss_pred HHHHHhcCC--CCCcEEEEccCCChHHHHHHHHhCCC--eEEEEECCcccc------------------ceEEccCCCCc
Confidence 344444443 3579999999999 69999987 665 899999998532 17888987743
Q ss_pred CCC-CceeeEEeccccccCCChHHHHHHHHhcccCCcEEEEEeeccC
Q 018740 244 FAS-SSIDAVHAGAAIHCWSSPSTGVAEISRVLRPGGVFVGTTYIVD 289 (351)
Q Consensus 244 ~~~-~~fD~V~~~~vl~h~~d~~~~l~~i~~~LkpgG~li~~~~~~~ 289 (351)
..- ..||+|.+..-- ++....+.++++.+ |.-+++.....+
T Consensus 84 ~~~Y~~~DLIYsirPP---~El~~~i~~lA~~v--~adliI~pL~~E 125 (153)
T 2k4m_A 84 MEIYRGAALIYSIRPP---AEIHSSLMRVADAV--GARLIIKPLTGE 125 (153)
T ss_dssp HHHHTTEEEEEEESCC---TTTHHHHHHHHHHH--TCEEEEECBTTB
T ss_pred ccccCCcCEEEEcCCC---HHHHHHHHHHHHHc--CCCEEEEcCCCC
Confidence 211 479999875542 34455666666643 557777666554
No 300
>2zig_A TTHA0409, putative modification methylase; methyltransferase, S- adenosylmethionine, structural genomics, NPPSFA; 2.10A {Thermus thermophilus} PDB: 2zie_A* 2zif_A
Probab=97.96 E-value=2.4e-05 Score=70.98 Aligned_cols=61 Identities=16% Similarity=0.164 Sum_probs=52.5
Q ss_pred CcHHHHHHHHhccCCCCCCeEEEEcCccCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHhhh
Q 018740 161 GPEKEFELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQE 224 (351)
Q Consensus 161 ~~~~~~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~ 224 (351)
.+..+.+.+..... .++..|||++||+|..+..+++.+. +++|+|+++.+++.|++++...
T Consensus 220 ~p~~l~~~~i~~~~-~~~~~vlD~f~GsGt~~~~a~~~g~--~~~g~e~~~~~~~~a~~r~~~~ 280 (297)
T 2zig_A 220 FPLELAERLVRMFS-FVGDVVLDPFAGTGTTLIAAARWGR--RALGVELVPRYAQLAKERFARE 280 (297)
T ss_dssp SCHHHHHHHHHHHC-CTTCEEEETTCTTTHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHhC-CCCCEEEECCCCCCHHHHHHHHcCC--eEEEEeCCHHHHHHHHHHHHHh
Confidence 35667777776665 4688999999999999999999886 9999999999999999998775
No 301
>1rjd_A PPM1P, carboxy methyl transferase for protein phosphatase 2A catalytic subunit; SAM dependent methyltransferase; HET: SAM; 1.80A {Saccharomyces cerevisiae} SCOP: c.66.1.37 PDB: 1rje_A* 1rjf_A 1rjg_A* 2ob2_A* 2ob1_A
Probab=97.89 E-value=7.8e-05 Score=68.62 Aligned_cols=158 Identities=13% Similarity=0.149 Sum_probs=103.8
Q ss_pred HhccCCCCCCeEEEEcCccCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHhhhC------CC------------CCCC
Q 018740 170 KGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQES------NF------------PKEN 231 (351)
Q Consensus 170 ~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~------g~------------~~~~ 231 (351)
..++...+...|+.+|||.......+...++...++-+|. |+.++.-++.+.... |. ...+
T Consensus 90 ~~fl~~~~~~qVV~LGaGlDTr~~RL~~~~~~~~~~EvD~-P~vi~~K~~~l~~~~~l~~~l~~~~~~~~~~~~~~~~~~ 168 (334)
T 1rjd_A 90 LEFLVANEKVQVVNLGCGSDLRMLPLLQMFPHLAYVDIDY-NESVELKNSILRESEILRISLGLSKEDTAKSPFLIDQGR 168 (334)
T ss_dssp HHHHHHCSSEEEEEETCTTCCTHHHHHHHCTTEEEEEEEC-HHHHHHHHHHHHHSHHHHHHHTCCSSCCCCTTEEEECSS
T ss_pred HHHHHHCCCcEEEEeCCCCccHHHHhcCcCCCCEEEECCC-HHHHHHHHHHhhhccchhhhcccccccccccccccCCCc
Confidence 3334324467999999999998888887655557777777 777777777665530 00 1368
Q ss_pred eEEEEecCCCCCC---------CCCceeeEEeccccccCCCh--HHHHHHHHhcccCCcEEEEEeeccCCCCCcchHHHH
Q 018740 232 FLLVRADISRLPF---------ASSSIDAVHAGAAIHCWSSP--STGVAEISRVLRPGGVFVGTTYIVDGPFNLIPFSRL 300 (351)
Q Consensus 232 i~~~~~d~~~lp~---------~~~~fD~V~~~~vl~h~~d~--~~~l~~i~~~LkpgG~li~~~~~~~~~~~~~~~~~~ 300 (351)
..++.+|+.+... ..+...++++-.++.+++.. ..+++.+.+.+ |+|.+++.++.... .+..++...
T Consensus 169 ~~~v~~DL~d~~w~~~ll~~~~d~~~Ptl~iaEgvL~YL~~~~~~~ll~~ia~~~-~~~~~v~~e~i~~~-~~~~~fg~~ 246 (334)
T 1rjd_A 169 YKLAACDLNDITETTRLLDVCTKREIPTIVISECLLCYMHNNESQLLINTIMSKF-SHGLWISYDPIGGS-QPNDRFGAI 246 (334)
T ss_dssp EEEEECCTTCHHHHHHHHHTTCCTTSCEEEEEESCGGGSCHHHHHHHHHHHHHHC-SSEEEEEEEECCCC-STTCCHHHH
T ss_pred eEEEecCCCCcHHHHHHHHhcCCCCCCEEEEEcchhhCCCHHHHHHHHHHHHhhC-CCcEEEEEeccCCC-CCcchHHHH
Confidence 8999999987421 23567899999999999644 47788888776 78877665554321 112233222
Q ss_pred HHHHHhh-----ccCCccCCCHHHHHHHHHHCCCe
Q 018740 301 LRQNMMQ-----ISGSYTFLSEREIEDLCRACGLV 330 (351)
Q Consensus 301 ~~~~~~~-----~~~~~~~~s~~~l~~ll~~aGf~ 330 (351)
+...+.. ......+.+.++..+.|.++||.
T Consensus 247 m~~~l~~~rg~~l~~~~~y~s~~~~~~rl~~~Gf~ 281 (334)
T 1rjd_A 247 MQSNLKESRNLEMPTLMTYNSKEKYASRWSAAPNV 281 (334)
T ss_dssp HHHHHHHHHCCCCTTTTTTCSHHHHHGGGTTSSEE
T ss_pred HHHHhhcccCCcccccccCCCHHHHHHHHHHCCCC
Confidence 2222211 12223567999999999999997
No 302
>3lkz_A Non-structural protein 5; flavivirus, methyltransferase, inhibitor, P nucleotide-binding, RNA replication, viral protein; HET: SFG; 2.00A {West nile virus}
Probab=97.85 E-value=0.0001 Score=65.39 Aligned_cols=108 Identities=17% Similarity=0.126 Sum_probs=73.0
Q ss_pred cCCCCCCeEEEEcCccCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHhhhCCCCCCCeEEEEe-cCCCCCCCCCceee
Q 018740 173 LKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRA-DISRLPFASSSIDA 251 (351)
Q Consensus 173 l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~g~~~~~i~~~~~-d~~~lp~~~~~fD~ 251 (351)
....++.+|||+||++|.++...+.......|+|+|+...--+.-+ ..++ .....+.+..+ |+..++. ..+|+
T Consensus 90 ~~l~~~~~VlDLGaapGGwsq~~~~~~gv~~V~avdvG~~~he~P~-~~~q---l~w~lV~~~~~~Dv~~l~~--~~~D~ 163 (321)
T 3lkz_A 90 RFLEPVGKVIDLGCGRGGWCYYMATQKRVQEVRGYTKGGPGHEEPQ-LVQS---YGWNIVTMKSGVDVFYRPS--ECCDT 163 (321)
T ss_dssp TSCCCCEEEEEETCTTCHHHHHHTTCTTEEEEEEECCCSTTSCCCC-CCCB---TTGGGEEEECSCCTTSSCC--CCCSE
T ss_pred cCCCCCCEEEEeCCCCCcHHHHHHhhcCCCEEEEEEcCCCCccCcc-hhhh---cCCcceEEEeccCHhhCCC--CCCCE
Confidence 4456778999999999999997776644458999999754100000 0000 01134778877 8877763 66999
Q ss_pred EEeccccccCCChH-------HHHHHHHhcccCC-cEEEEEeec
Q 018740 252 VHAGAAIHCWSSPS-------TGVAEISRVLRPG-GVFVGTTYI 287 (351)
Q Consensus 252 V~~~~vl~h~~d~~-------~~l~~i~~~Lkpg-G~li~~~~~ 287 (351)
|+|.-. +.-++|. .+|+-+.+.|++| |-+.+-...
T Consensus 164 ivcDig-eSs~~~~ve~~Rtl~vLel~~~wL~~~~~~f~~KVl~ 206 (321)
T 3lkz_A 164 LLCDIG-ESSSSAEVEEHRTIRVLEMVEDWLHRGPREFCVKVLC 206 (321)
T ss_dssp EEECCC-CCCSCHHHHHHHHHHHHHHHHHHHTTCCCEEEEEESC
T ss_pred EEEECc-cCCCChhhhhhHHHHHHHHHHHHhccCCCcEEEEEcC
Confidence 999777 7777763 3556667889998 888876554
No 303
>2px2_A Genome polyprotein [contains: capsid protein C (core protein); envelope protein M...; methyltransferase, SAH; HET: SAH; 2.00A {Murray valley encephalitis virus} PDB: 2px4_A* 2px5_A* 2pxa_A* 2pxc_A* 2px8_A* 2oy0_A*
Probab=97.84 E-value=4.7e-05 Score=66.36 Aligned_cols=104 Identities=16% Similarity=0.090 Sum_probs=64.4
Q ss_pred CCCCCCeEEEEcCccCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHhhhCCCCCCCe---EEEEe-cCCCCCCCCCce
Q 018740 174 KPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENF---LLVRA-DISRLPFASSSI 249 (351)
Q Consensus 174 ~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~g~~~~~i---~~~~~-d~~~lp~~~~~f 249 (351)
-..++.+|||+||+.|.++..+++.-....|.|.++.... .. . ... ....++ .+.++ |+..++ ...+
T Consensus 70 likpg~~VVDLGaAPGGWSQvAa~~~~vg~V~G~vig~D~-~~-~---P~~--~~~~Gv~~i~~~~G~Df~~~~--~~~~ 140 (269)
T 2px2_A 70 FVQPIGKVVDLGCGRGGWSYYAATMKNVQEVRGYTKGGPG-HE-E---PML--MQSYGWNIVTMKSGVDVFYKP--SEIS 140 (269)
T ss_dssp SCCCCEEEEEETCTTSHHHHHHTTSTTEEEEEEECCCSTT-SC-C---CCC--CCSTTGGGEEEECSCCGGGSC--CCCC
T ss_pred CCCCCCEEEEcCCCCCHHHHHHhhhcCCCCceeEEEcccc-cc-C---CCc--ccCCCceEEEeeccCCccCCC--CCCC
Confidence 4556889999999999999999886211244455544321 00 0 000 000233 44446 987754 4579
Q ss_pred eeEEeccccccCCChH-------HHHHHHHhcccCCc-EEEEEeec
Q 018740 250 DAVHAGAAIHCWSSPS-------TGVAEISRVLRPGG-VFVGTTYI 287 (351)
Q Consensus 250 D~V~~~~vl~h~~d~~-------~~l~~i~~~LkpgG-~li~~~~~ 287 (351)
|+|+|-.+-. ..++. .+|.-+.++|+||| .|++-.+.
T Consensus 141 DvVLSDMAPn-SG~~~vD~~Rs~~aL~~A~~~Lk~gG~~FvvKVFq 185 (269)
T 2px2_A 141 DTLLCDIGES-SPSAEIEEQRTLRILEMVSDWLSRGPKEFCIKILC 185 (269)
T ss_dssp SEEEECCCCC-CSCHHHHHHHHHHHHHHHHHHHTTCCSEEEEEESC
T ss_pred CEEEeCCCCC-CCccHHHHHHHHHHHHHHHHHhhcCCcEEEEEECC
Confidence 9999876543 33321 24656668999999 88887766
No 304
>2k5r_A Uncharacterized protein XF2673; solution structure, structural genomics, PSI-2, protein structure initiative; NMR {Xylella fastidiosa TEMECULA1}
Probab=97.84 E-value=6.2e-06 Score=60.75 Aligned_cols=54 Identities=11% Similarity=0.094 Sum_probs=41.4
Q ss_pred cCCCceeCCCCCCCcccccC------------------CCcccccccCCccccccccccccccCceeeeccc
Q 018740 67 TSKNVLACPICYKPLTWIGD------------------SSLSIESAAGSSLQCNTCKKTYSGVGTHFDMTAA 120 (351)
Q Consensus 67 ~~~~~l~CP~C~~~l~~~~~------------------~~~~~~~~~~~~~~C~~C~~~~~~~~g~~~~~~~ 120 (351)
.-+++|+||.|+++|..... .....+++..+.+.|+.|+..|++++|++.++..
T Consensus 4 ~LLdILaCP~cK~pL~l~~~~~~~~~~ca~~~~~~~~~~~~~~~e~~~~~LvC~~c~~~YPI~dGIPvmL~~ 75 (97)
T 2k5r_A 4 KLLHLLCSPDTRQPLSLLESKGLEALNKAIVSGTVQRADGSIQNQSLHEALITRDRKQVFRIEDSIPVLLPE 75 (97)
T ss_dssp TTCSSCCCCTTSSCCEECCHHHHHHHHHHHHHTCCBCTTSCBCCCCCSEEEECTTSCEEEEEETTEEECCGG
T ss_pred HHhhheECCCCCCcccccccchhhhhhhhhhccccccccccccccccCCeEEcCCCCCCccccCCCcccChH
Confidence 45789999999998876431 1112334456789999999999999999999875
No 305
>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A*
Probab=97.81 E-value=4.5e-06 Score=95.19 Aligned_cols=148 Identities=16% Similarity=0.152 Sum_probs=70.0
Q ss_pred CCCeEEEEcCccCHHHHHHHHhCC-----CCeEEEEeCCHHHHHHHHHHHhhhCCCCCCCeEEEEecCCCC-CCCCCcee
Q 018740 177 LGGNIIDASCGSGLFSRIFAKSGL-----FSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRL-PFASSSID 250 (351)
Q Consensus 177 ~~~~vLDiGcG~G~~~~~l~~~~~-----~~~v~gvD~s~~~~~~a~~~~~~~~g~~~~~i~~~~~d~~~l-p~~~~~fD 250 (351)
+..+|||||.|+|..+..+.+... ..+++..|+|+...+.++++++.. .++....|..+. ++..++||
T Consensus 1240 ~~~~ilEigagtg~~t~~il~~l~~~~~~~~~yt~td~s~~~~~~a~~~f~~~------di~~~~~d~~~~~~~~~~~yd 1313 (2512)
T 2vz8_A 1240 PKMKVVEVLAGDGQLYSRIPALLNTQPVMDLDYTATDRNPQALEAAQAKLEQL------HVTQGQWDPANPAPGSLGKAD 1313 (2512)
T ss_dssp SEEEEEEESCSSSCCTTTHHHHTTTSSSCEEEEEEECSSSSSTTTTTTTHHHH------TEEEECCCSSCCCC-----CC
T ss_pred CCceEEEECCCccHHHHHHHHhhcccCcccceEEEecCChHHHHHHHHHhhhc------ccccccccccccccCCCCcee
Confidence 456999999999987655544321 237899999998888887766442 232222243332 33456799
Q ss_pred eEEeccccccCCChHHHHHHHHhcccCCcEEEEEeeccCCCCCcchHHHHHHHHHhhccCCccCCCHHHHHHHHHHCCCe
Q 018740 251 AVHAGAAIHCWSSPSTGVAEISRVLRPGGVFVGTTYIVDGPFNLIPFSRLLRQNMMQISGSYTFLSEREIEDLCRACGLV 330 (351)
Q Consensus 251 ~V~~~~vl~h~~d~~~~l~~i~~~LkpgG~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~~ll~~aGf~ 330 (351)
+|++.+++|-.++....|++++++|||||.+++............+ . +... .......+.+.++|.++|+.+||.
T Consensus 1314 lvia~~vl~~t~~~~~~l~~~~~lL~p~G~l~~~e~~~~~~~g~~~--~-~~~~--~~r~~~~~~~~~~w~~~l~~~gf~ 1388 (2512)
T 2vz8_A 1314 LLVCNCALATLGDPAVAVGNMAATLKEGGFLLLHTLLAGHPLGEMV--G-FLTS--PEQGGRHLLSQDQWESLFAGASLH 1388 (2512)
T ss_dssp EEEEECC--------------------CCEEEEEEC-------------------------------CTTTTSSTTTTEE
T ss_pred EEEEcccccccccHHHHHHHHHHhcCCCcEEEEEeccccccccccc--c-cccc--ccccCCcccCHHHHHHHHHhCCCc
Confidence 9999999998889999999999999999999887654221110000 0 0000 000112346777888889999998
Q ss_pred EEEEE
Q 018740 331 DFKCT 335 (351)
Q Consensus 331 ~v~~~ 335 (351)
.+...
T Consensus 1389 ~~~~~ 1393 (2512)
T 2vz8_A 1389 LVALK 1393 (2512)
T ss_dssp EEEEE
T ss_pred eeeec
Confidence 87643
No 306
>3p8z_A Mtase, non-structural protein 5; methyltransferase, RNA, ER, transferase-transferase inhibito; HET: 36A SAH; 1.70A {Dengue virus 3} SCOP: c.66.1.25 PDB: 3p97_A* 2xbm_A* 3evg_A*
Probab=97.74 E-value=0.00026 Score=60.79 Aligned_cols=107 Identities=17% Similarity=0.140 Sum_probs=72.4
Q ss_pred CCCCCCeEEEEcCccCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHhhhCCCCCCCeEEEEe-cCCCCCCCCCceeeE
Q 018740 174 KPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRA-DISRLPFASSSIDAV 252 (351)
Q Consensus 174 ~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~g~~~~~i~~~~~-d~~~lp~~~~~fD~V 252 (351)
...++.+|||+||++|.++...+.......|+|+|+-..--+.-+ ..+ ..+...+.|.++ |+..++. .++|.|
T Consensus 75 ~l~~g~~VvDLGaapGGWSq~~a~~~g~~~V~avdvG~~ghe~P~-~~~---s~gwn~v~fk~gvDv~~~~~--~~~Dtl 148 (267)
T 3p8z_A 75 MVIPEGRVIDLGCGRGGWSYYCAGLKKVTEVRGYTKGGPGHEEPV-PMS---TYGWNIVKLMSGKDVFYLPP--EKCDTL 148 (267)
T ss_dssp SSCCCEEEEEESCTTSHHHHHHHTSTTEEEEEEECCCSTTSCCCC-CCC---CTTTTSEEEECSCCGGGCCC--CCCSEE
T ss_pred CCCCCCEEEEcCCCCCcHHHHHHHhcCCCEEEEEecCCCCccCcc-hhh---hcCcCceEEEeccceeecCC--ccccEE
Confidence 556788999999999999997777654558999999753110000 000 112467899999 9876653 669999
Q ss_pred EeccccccCCChH-------HHHHHHHhcccCCcEEEEEeecc
Q 018740 253 HAGAAIHCWSSPS-------TGVAEISRVLRPGGVFVGTTYIV 288 (351)
Q Consensus 253 ~~~~vl~h~~d~~-------~~l~~i~~~LkpgG~li~~~~~~ 288 (351)
+|.-.= .-++|. .+|+-+.+.|++ |-+.+-....
T Consensus 149 lcDIge-Ss~~~~vE~~RtlrvLela~~wL~~-~~fc~KVl~p 189 (267)
T 3p8z_A 149 LCDIGE-SSPSPTVEESRTIRVLKMVEPWLKN-NQFCIKVLNP 189 (267)
T ss_dssp EECCCC-CCSCHHHHHHHHHHHHHHHGGGCSS-CEEEEEESCC
T ss_pred EEecCC-CCCChhhhhhHHHHHHHHHHHhccc-CCEEEEEccC
Confidence 986653 444542 356666788998 7777765543
No 307
>3tka_A Ribosomal RNA small subunit methyltransferase H; HET: SAM CTN PG4; 2.25A {Escherichia coli}
Probab=97.50 E-value=0.00011 Score=66.97 Aligned_cols=83 Identities=20% Similarity=0.262 Sum_probs=66.8
Q ss_pred HHHHHhccCCCCCCeEEEEcCccCHHHHHHHHh-CCCCeEEEEeCCHHHHHHHHHHHhhhCCCCCCCeEEEEecCCCCC-
Q 018740 166 FELMKGYLKPVLGGNIIDASCGSGLFSRIFAKS-GLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLP- 243 (351)
Q Consensus 166 ~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~-~~~~~v~gvD~s~~~~~~a~~~~~~~~g~~~~~i~~~~~d~~~lp- 243 (351)
.+.+.+.+...+++.++|..||.|..+..+++. ++.++|+|+|.++.+++.++ ++ . ..++.++.+++.++.
T Consensus 46 l~Evl~~L~i~pggiyVD~TlG~GGHS~~iL~~lg~~GrVig~D~Dp~Al~~A~-rL--~----~~Rv~lv~~nF~~l~~ 118 (347)
T 3tka_A 46 LDEAVNGLNIRPDGIYIDGTFGRGGHSRLILSQLGEEGRLLAIDRDPQAIAVAK-TI--D----DPRFSIIHGPFSALGE 118 (347)
T ss_dssp THHHHHHTCCCTTCEEEESCCTTSHHHHHHHTTCCTTCEEEEEESCHHHHHHHT-TC--C----CTTEEEEESCGGGHHH
T ss_pred HHHHHHhhCCCCCCEEEEeCcCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHH-hh--c----CCcEEEEeCCHHHHHH
Confidence 456677777888999999999999999999987 56789999999999999984 43 2 468999999988763
Q ss_pred -CC----CCceeeEEec
Q 018740 244 -FA----SSSIDAVHAG 255 (351)
Q Consensus 244 -~~----~~~fD~V~~~ 255 (351)
+. .+++|.|++.
T Consensus 119 ~L~~~g~~~~vDgILfD 135 (347)
T 3tka_A 119 YVAERDLIGKIDGILLD 135 (347)
T ss_dssp HHHHTTCTTCEEEEEEE
T ss_pred HHHhcCCCCcccEEEEC
Confidence 11 1369999965
No 308
>2uyo_A Hypothetical protein ML2640; putative methyltransferase, transferas; 1.7A {Mycobacterium leprae} SCOP: c.66.1.57 PDB: 2ckd_A 2uyq_A*
Probab=97.40 E-value=0.002 Score=58.59 Aligned_cols=150 Identities=13% Similarity=0.028 Sum_probs=97.9
Q ss_pred CeEEEEcCccCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHhhhCCCCCCCeEEEEecCCCCC---------CCCCce
Q 018740 179 GNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLP---------FASSSI 249 (351)
Q Consensus 179 ~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~g~~~~~i~~~~~d~~~lp---------~~~~~f 249 (351)
..|+++|||-=.....+.. .....++-+| .|..++..++.+.........+..++.+|+.+ . +.....
T Consensus 104 ~QvV~LGaGlDTra~Rl~~-~~~~~v~evD-~P~vi~~k~~lL~~~~~~~~~~~~~v~~Dl~d-~~~~~l~~~g~d~~~P 180 (310)
T 2uyo_A 104 RQFVILASGLDSRAYRLDW-PTGTTVYEID-QPKVLAYKSTTLAEHGVTPTADRREVPIDLRQ-DWPPALRSAGFDPSAR 180 (310)
T ss_dssp CEEEEETCTTCCHHHHSCC-CTTCEEEEEE-CHHHHHHHHHHHHHTTCCCSSEEEEEECCTTS-CHHHHHHHTTCCTTSC
T ss_pred CeEEEeCCCCCchhhhccC-CCCcEEEEcC-CHHHHHHHHHHHHhcCCCCCCCeEEEecchHh-hHHHHHHhccCCCCCC
Confidence 5799999998666554431 2235889999 59999999888875311125678899999976 2 222345
Q ss_pred eeEEeccccccCCCh--HHHHHHHHhcccCCcEEEEEeeccCCCCCcchHHHHHH-HHHhhcc-------CCccC-CC-H
Q 018740 250 DAVHAGAAIHCWSSP--STGVAEISRVLRPGGVFVGTTYIVDGPFNLIPFSRLLR-QNMMQIS-------GSYTF-LS-E 317 (351)
Q Consensus 250 D~V~~~~vl~h~~d~--~~~l~~i~~~LkpgG~li~~~~~~~~~~~~~~~~~~~~-~~~~~~~-------~~~~~-~s-~ 317 (351)
-++++-.+++++++. ..+++.+...+.||+.+++.....+... .......+. ..+.... ....+ .+ .
T Consensus 181 t~~i~Egvl~Yl~~~~~~~ll~~l~~~~~~gs~l~~d~~~~~~~~-~~~~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~~ 259 (310)
T 2uyo_A 181 TAWLAEGLLMYLPATAQDGLFTEIGGLSAVGSRIAVETSPLHGDE-WREQMQLRFRRVSDALGFEQAVDVQELIYHDENR 259 (310)
T ss_dssp EEEEECSCGGGSCHHHHHHHHHHHHHTCCTTCEEEEECCCTTCSH-HHHHHHHHHHHHHC-----------CCTTCCTTC
T ss_pred EEEEEechHhhCCHHHHHHHHHHHHHhCCCCeEEEEEecCCCCcc-hhHHHHHHHHHHHHHcCCcCCCCccccccCCCCh
Confidence 678888999999753 4788999998899999998776543210 000111111 2221111 12223 36 7
Q ss_pred HHHHHHHHHCCCeEE
Q 018740 318 REIEDLCRACGLVDF 332 (351)
Q Consensus 318 ~~l~~ll~~aGf~~v 332 (351)
+++.+.|.+.||+.+
T Consensus 260 ~~~~~~f~~~G~~~~ 274 (310)
T 2uyo_A 260 AVVADWLNRHGWRAT 274 (310)
T ss_dssp CCHHHHHTTTTEEEE
T ss_pred HHHHHHHHHCcCccc
Confidence 899999999999877
No 309
>1i4w_A Mitochondrial replication protein MTF1; mitochondrial transcription factor, transcription initiation; 2.60A {Saccharomyces cerevisiae} SCOP: c.66.1.24
Probab=97.38 E-value=0.00044 Score=63.92 Aligned_cols=74 Identities=14% Similarity=0.077 Sum_probs=58.4
Q ss_pred HHHHHHHHhccCCC------CCCeEEEEcCccCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHhhhCCCCCCCeEEEE
Q 018740 163 EKEFELMKGYLKPV------LGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVR 236 (351)
Q Consensus 163 ~~~~~~l~~~l~~~------~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~g~~~~~i~~~~ 236 (351)
....+.+.+.+... ++..|||||.|.|.++..|.+.....+|+++|+++.++...++.. . .++++++.
T Consensus 38 ~~i~~~Iv~~~~l~~~~~~~~~~~VlEIGPG~G~LT~~Ll~~~~~~~vvavE~D~~l~~~L~~~~-~-----~~~l~ii~ 111 (353)
T 1i4w_A 38 PTVYNKIFDKLDLTKTYKHPEELKVLDLYPGVGIQSAIFYNKYCPRQYSLLEKRSSLYKFLNAKF-E-----GSPLQILK 111 (353)
T ss_dssp HHHHHHHHHHHCGGGTCCCTTTCEEEEESCTTCHHHHHHHHHHCCSEEEEECCCHHHHHHHHHHT-T-----TSSCEEEC
T ss_pred HHHHHHHHHhccCCcccCcCCCCEEEEECCCCCHHHHHHHhhCCCCEEEEEecCHHHHHHHHHhc-c-----CCCEEEEE
Confidence 44556666666543 357899999999999999998732348999999999999998875 2 36899999
Q ss_pred ecCCCC
Q 018740 237 ADISRL 242 (351)
Q Consensus 237 ~d~~~l 242 (351)
+|+.++
T Consensus 112 ~D~l~~ 117 (353)
T 1i4w_A 112 RDPYDW 117 (353)
T ss_dssp SCTTCH
T ss_pred CCccch
Confidence 999654
No 310
>3vyw_A MNMC2; tRNA wobble uridine, modification enzyme, genetic CODE, 5- methylaminomethyl-2-thiouridine, methyltransferase; HET: SAM; 2.49A {Aquifex aeolicus} PDB: 2e58_A*
Probab=97.36 E-value=0.0019 Score=58.21 Aligned_cols=141 Identities=13% Similarity=0.078 Sum_probs=83.2
Q ss_pred CCeEEEEcCccCHHHHHH----HHhCCCCeE--EEEeCCH--------H-HHHHHHHHHhhhC--CCCCCCeEEEEecCC
Q 018740 178 GGNIIDASCGSGLFSRIF----AKSGLFSLV--VALDYSE--------N-MLKQCYEFVQQES--NFPKENFLLVRADIS 240 (351)
Q Consensus 178 ~~~vLDiGcG~G~~~~~l----~~~~~~~~v--~gvD~s~--------~-~~~~a~~~~~~~~--g~~~~~i~~~~~d~~ 240 (351)
.-+|||+|-|+|.+.... .+..+..++ +.+|-.+ . ..+.....+.... ......+.+..+|+.
T Consensus 97 ~~~IlE~GFGTGLNfl~t~~~~~~~~~~~~L~~iS~Ek~pl~~~~~~~~~~~~l~~~l~~~~p~~~~~~v~L~l~~GDa~ 176 (308)
T 3vyw_A 97 VIRILDVGFGLGYNLAVALKHLWEVNPKLRVEIISFEKELLKEFPILPEPYREIHEFLLERVPEYEGERLSLKVLLGDAR 176 (308)
T ss_dssp EEEEEEECCTTSHHHHHHHHHHHHHCTTCEEEEEEEESSCCSCCCCCCTTSHHHHHHHHHHCSEEECSSEEEEEEESCHH
T ss_pred CcEEEEeCCCccHHHHHHHHHHHHhCCCcceEEEeecHHHHHhhHhchHhHHHHHHHHHHhCccccCCcEEEEEEechHH
Confidence 358999999999865433 233554444 5555311 1 1111221111110 001224566778875
Q ss_pred C-CC-CCCCceeeEEeccccccCCCh----HHHHHHHHhcccCCcEEEEEeeccCCCCCcchHHHHHHHHHhhccCCccC
Q 018740 241 R-LP-FASSSIDAVHAGAAIHCWSSP----STGVAEISRVLRPGGVFVGTTYIVDGPFNLIPFSRLLRQNMMQISGSYTF 314 (351)
Q Consensus 241 ~-lp-~~~~~fD~V~~~~vl~h~~d~----~~~l~~i~~~LkpgG~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 314 (351)
+ ++ +.+..+|+|+.-. +---.+| ..+++.++++++|||++. |+.
T Consensus 177 ~~l~~l~~~~~Da~flDg-FsP~kNPeLWs~e~f~~l~~~~~pgg~la--TYt--------------------------- 226 (308)
T 3vyw_A 177 KRIKEVENFKADAVFHDA-FSPYKNPELWTLDFLSLIKERIDEKGYWV--SYS--------------------------- 226 (308)
T ss_dssp HHGGGCCSCCEEEEEECC-SCTTTSGGGGSHHHHHHHHTTEEEEEEEE--ESC---------------------------
T ss_pred HHHhhhcccceeEEEeCC-CCcccCcccCCHHHHHHHHHHhCCCcEEE--EEe---------------------------
Confidence 4 33 3345799999743 2222344 489999999999999876 332
Q ss_pred CCHHHHHHHHHHCCCeEEEEEec-CeEEEEEEecCC
Q 018740 315 LSEREIEDLCRACGLVDFKCTRN-RGFVMFTATKPS 349 (351)
Q Consensus 315 ~s~~~l~~ll~~aGf~~v~~~~~-g~~~~~~a~kp~ 349 (351)
....++..|+++||.+.+.--. +..-+..|.++.
T Consensus 227 -aag~VRR~L~~aGF~V~k~~G~g~KReml~A~~~~ 261 (308)
T 3vyw_A 227 -SSLSVRKSLLTLGFKVGSSREIGRKRKGTVASLKA 261 (308)
T ss_dssp -CCHHHHHHHHHTTCEEEEEECC---CEEEEEESSS
T ss_pred -CcHHHHHHHHHCCCEEEecCCCCCCCceeEEecCC
Confidence 2346889999999998876543 345677777653
No 311
>1g60_A Adenine-specific methyltransferase MBOIIA; structural genomics, DNA methylation, S- adenosylmethionine, PSI, protein structure initiative; HET: SAM; 1.74A {Moraxella bovis} SCOP: c.66.1.11
Probab=97.21 E-value=0.00084 Score=59.42 Aligned_cols=62 Identities=19% Similarity=0.190 Sum_probs=51.5
Q ss_pred CCcHHHHHHHHhccCCCCCCeEEEEcCccCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHhhh
Q 018740 160 PGPEKEFELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQE 224 (351)
Q Consensus 160 ~~~~~~~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~ 224 (351)
.-+..+.+.+..... .++..|||..||+|..+.+..+.+. +++|+|+++.+++.+++++...
T Consensus 196 ~~p~~l~~~~i~~~~-~~~~~vlD~f~GsGtt~~~a~~~gr--~~ig~e~~~~~~~~~~~r~~~~ 257 (260)
T 1g60_A 196 PKPRDLIERIIRASS-NPNDLVLDCFMGSGTTAIVAKKLGR--NFIGCDMNAEYVNQANFVLNQL 257 (260)
T ss_dssp CCCHHHHHHHHHHHC-CTTCEEEESSCTTCHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHHC-
T ss_pred CCCHHHHHHHHHHhC-CCCCEEEECCCCCCHHHHHHHHcCC--eEEEEeCCHHHHHHHHHHHHhc
Confidence 345667777766654 4678999999999999999999886 9999999999999999998654
No 312
>3r24_A NSP16, 2'-O-methyl transferase; methyltransferase, zinc-finger, transferase, viral protein; HET: SAM; 2.00A {Sars coronavirus}
Probab=96.77 E-value=0.0047 Score=54.81 Aligned_cols=95 Identities=12% Similarity=0.043 Sum_probs=63.1
Q ss_pred CCCCeEEEEcC------ccCHHHHHHHHhCCC-CeEEEEeCCHHHHHHHHHHHhhhCCCCCCCeEEEEecCCCCCCCCCc
Q 018740 176 VLGGNIIDASC------GSGLFSRIFAKSGLF-SLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLPFASSS 248 (351)
Q Consensus 176 ~~~~~vLDiGc------G~G~~~~~l~~~~~~-~~v~gvD~s~~~~~~a~~~~~~~~g~~~~~i~~~~~d~~~lp~~~~~ 248 (351)
..+.+|||+|+ ..|. ..+.+.++. ..|+++|+.+-. .... .++++|...+.. .++
T Consensus 108 p~gmrVLDLGA~s~kg~APGS--~VLr~~~p~g~~VVavDL~~~~--------------sda~-~~IqGD~~~~~~-~~k 169 (344)
T 3r24_A 108 PYNMRVIHFGAGSDKGVAPGT--AVLRQWLPTGTLLVDSDLNDFV--------------SDAD-STLIGDCATVHT-ANK 169 (344)
T ss_dssp CTTCEEEEESCCCTTSBCHHH--HHHHHHSCTTCEEEEEESSCCB--------------CSSS-EEEESCGGGEEE-SSC
T ss_pred cCCCEEEeCCCCCCCCCCCcH--HHHHHhCCCCcEEEEeeCcccc--------------cCCC-eEEEcccccccc-CCC
Confidence 45789999996 5566 345555665 489999997731 0123 459999866543 478
Q ss_pred eeeEEecccc---ccC--CC------hHHHHHHHHhcccCCcEEEEEeecc
Q 018740 249 IDAVHAGAAI---HCW--SS------PSTGVAEISRVLRPGGVFVGTTYIV 288 (351)
Q Consensus 249 fD~V~~~~vl---~h~--~d------~~~~l~~i~~~LkpgG~li~~~~~~ 288 (351)
||+|++-.+- -+. .. -+.++.=+.++|+|||.|++-.+..
T Consensus 170 ~DLVISDMAPNtTG~~D~d~~Rs~~L~ElALdfA~~~LkpGGsFvVKVFQG 220 (344)
T 3r24_A 170 WDLIISDMYDPRTKHVTKENDSKEGFFTYLCGFIKQKLALGGSIAVKITEH 220 (344)
T ss_dssp EEEEEECCCCTTSCSSCSCCCCCCTHHHHHHHHHHHHEEEEEEEEEEECSS
T ss_pred CCEEEecCCCCcCCccccchhHHHHHHHHHHHHHHHhCcCCCEEEEEEecC
Confidence 9999985432 111 11 1355666778999999999976543
No 313
>3iei_A Leucine carboxyl methyltransferase 1; LCMT-1, S-adenosyl-L-methionine; HET: SAH MES; 1.90A {Homo sapiens} PDB: 3p71_T* 3mnt_A* 3o7w_A*
Probab=96.55 E-value=0.13 Score=47.04 Aligned_cols=153 Identities=10% Similarity=0.116 Sum_probs=96.5
Q ss_pred CCCeEEEEcCccCHHHHHHHHhC-CCCeEEEEeCCHHHHHHHHHHHhhhC------C--------------CCCCCeEEE
Q 018740 177 LGGNIIDASCGSGLFSRIFAKSG-LFSLVVALDYSENMLKQCYEFVQQES------N--------------FPKENFLLV 235 (351)
Q Consensus 177 ~~~~vLDiGcG~G~~~~~l~~~~-~~~~v~gvD~s~~~~~~a~~~~~~~~------g--------------~~~~~i~~~ 235 (351)
+...|+-+|||.=.....+...+ +...++=+|. |+.++.=++.+.... | ....+..++
T Consensus 90 ~~~QVV~LGaGlDTr~~RL~~~~~~~~~~~EVD~-P~vi~~K~~~l~~~~~l~~~lg~~~~~~~~~~~~~~l~s~~y~~v 168 (334)
T 3iei_A 90 CHCQIVNLGAGMDTTFWRLKDEDLLSSKYFEVDF-PMIVTRKLHSIKCKPPLSSPILELHSEDTLQMDGHILDSKRYAVI 168 (334)
T ss_dssp TCSEEEEETCTTCCHHHHHHHTTCCCSEEEEEEC-HHHHHHHHHHHHHCHHHHHHHHHHSSSSSCBCCTTEEECSSEEEE
T ss_pred CCCEEEEeCCCcCchHHHhcCCCCCCCeEEECCc-HHHHHHHHHHHhhchhhhhhhcccccccccccccccCCCCceEEE
Confidence 35689999999877777776542 3456777776 555554333333200 0 014678899
Q ss_pred EecCCCC----------CCCCCceeeEEeccccccCCCh--HHHHHHHHhcccCCcEEEEEeeccCCCCCcchHHHHHHH
Q 018740 236 RADISRL----------PFASSSIDAVHAGAAIHCWSSP--STGVAEISRVLRPGGVFVGTTYIVDGPFNLIPFSRLLRQ 303 (351)
Q Consensus 236 ~~d~~~l----------p~~~~~fD~V~~~~vl~h~~d~--~~~l~~i~~~LkpgG~li~~~~~~~~~~~~~~~~~~~~~ 303 (351)
.+|+.+. .+.....-++++-.++.+++.. ..+|+.+.+.. |+|.+++.++... ..++.+.+..
T Consensus 169 ~~DL~d~~~l~~~L~~~g~d~~~Ptl~iaEGvL~YL~~~~~~~ll~~ia~~f-~~~~~i~yE~i~p----~d~fg~~M~~ 243 (334)
T 3iei_A 169 GADLRDLSELEEKLKKCNMNTQLPTLLIAECVLVYMTPEQSANLLKWAANSF-ERAMFINYEQVNM----GDRFGQIMIE 243 (334)
T ss_dssp ECCTTCHHHHHHHHHHTTCCTTSCEEEEEESCGGGSCHHHHHHHHHHHHHHC-SSEEEEEEEECCT----TSHHHHHHHH
T ss_pred ccccccchhHHHHHHhcCCCCCCCEEEEEchhhhCCCHHHHHHHHHHHHHhC-CCceEEEEeccCC----CCHHHHHHHH
Confidence 9999763 1334556688888899998643 47778777766 5566666565532 2344444433
Q ss_pred HHhh----ccCCccCCCHHHHHHHHHHCCCeEEEEE
Q 018740 304 NMMQ----ISGSYTFLSEREIEDLCRACGLVDFKCT 335 (351)
Q Consensus 304 ~~~~----~~~~~~~~s~~~l~~ll~~aGf~~v~~~ 335 (351)
.+.. ..+...|.+.++..+.+.++||..+...
T Consensus 244 ~l~~~g~pl~sl~~y~t~~~~~~r~~~~Gw~~~~~~ 279 (334)
T 3iei_A 244 NLRRRQCDLAGVETCKSLESQKERLLSNGWETASAV 279 (334)
T ss_dssp HHHTTTCCCTTGGGGGCHHHHHHHHHTTTCSEEEEE
T ss_pred HHHHhCCCCcccccCCCHHHHHHHHHHcCCCcceee
Confidence 3322 2223356788999999999999987644
No 314
>2oo3_A Protein involved in catabolism of external DNA; structural genomics, unknown function, PSI-2, protein structure initiative; 2.00A {Legionella pneumophila subsp} SCOP: c.66.1.59
Probab=96.13 E-value=0.0036 Score=55.65 Aligned_cols=115 Identities=9% Similarity=-0.009 Sum_probs=84.0
Q ss_pred HHHHHHHhccCCCCCCeEEEEcCccCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHhhhCCCCCCCeEEEEecCCC-C
Q 018740 164 KEFELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISR-L 242 (351)
Q Consensus 164 ~~~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~g~~~~~i~~~~~d~~~-l 242 (351)
..++.+.. + .+..+||+=+|+|.++..+...+ .+++.+|.++..++..++++.. ..++.++..|... +
T Consensus 82 ~yf~~l~~-~---n~~~~LDlfaGSGaLgiEaLS~~--d~~vfvE~~~~a~~~L~~Nl~~-----~~~~~V~~~D~~~~L 150 (283)
T 2oo3_A 82 EYISVIKQ-I---NLNSTLSYYPGSPYFAINQLRSQ--DRLYLCELHPTEYNFLLKLPHF-----NKKVYVNHTDGVSKL 150 (283)
T ss_dssp HHHHHHHH-H---SSSSSCCEEECHHHHHHHHSCTT--SEEEEECCSHHHHHHHTTSCCT-----TSCEEEECSCHHHHH
T ss_pred HHHHHHHH-h---cCCCceeEeCCcHHHHHHHcCCC--CeEEEEeCCHHHHHHHHHHhCc-----CCcEEEEeCcHHHHH
Confidence 34455555 2 24578999999999999998855 4999999999999999887654 3679999999643 2
Q ss_pred C---CCCCceeeEEeccccccCCChHHHHHHHHh--cccCCcEEEEEeeccC
Q 018740 243 P---FASSSIDAVHAGAAIHCWSSPSTGVAEISR--VLRPGGVFVGTTYIVD 289 (351)
Q Consensus 243 p---~~~~~fD~V~~~~vl~h~~d~~~~l~~i~~--~LkpgG~li~~~~~~~ 289 (351)
. .+..+||+|++-=-.+.-.+...+++.+.+ .+.|+|++++.-|..+
T Consensus 151 ~~l~~~~~~fdLVfiDPPYe~k~~~~~vl~~L~~~~~r~~~Gi~v~WYPi~~ 202 (283)
T 2oo3_A 151 NALLPPPEKRGLIFIDPSYERKEEYKEIPYAIKNAYSKFSTGLYCVWYPVVN 202 (283)
T ss_dssp HHHCSCTTSCEEEEECCCCCSTTHHHHHHHHHHHHHHHCTTSEEEEEEEESS
T ss_pred HHhcCCCCCccEEEECCCCCCCcHHHHHHHHHHHhCccCCCeEEEEEEeccc
Confidence 1 234579999986555533345566666665 4569999999888754
No 315
>3qv2_A 5-cytosine DNA methyltransferase; DNMT2, ehmeth; HET: SAH; 2.15A {Entamoeba histolytica}
Probab=95.84 E-value=0.15 Score=46.50 Aligned_cols=126 Identities=14% Similarity=0.132 Sum_probs=81.2
Q ss_pred CCeEEEEcCccCHHHHHHHHhCCC-CeE-EEEeCCHHHHHHHHHHHhhhCCCCCCCeEEEEecCCCCCC---CCCceeeE
Q 018740 178 GGNIIDASCGSGLFSRIFAKSGLF-SLV-VALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLPF---ASSSIDAV 252 (351)
Q Consensus 178 ~~~vLDiGcG~G~~~~~l~~~~~~-~~v-~gvD~s~~~~~~a~~~~~~~~g~~~~~i~~~~~d~~~lp~---~~~~fD~V 252 (351)
.-+++|+-||.|.+...+.+.|.. ..+ .++|+++.+++..+.+... . ++.+|+.++.. +...+|++
T Consensus 10 ~~~vidLFaG~GG~~~G~~~aG~~~~~v~~a~e~d~~a~~ty~~N~~~--------~-~~~~DI~~~~~~~i~~~~~Dil 80 (327)
T 3qv2_A 10 QVNVIEFFSGIGGLRSSYERSSININATFIPFDINEIANKIYSKNFKE--------E-VQVKNLDSISIKQIESLNCNTW 80 (327)
T ss_dssp CEEEEEETCTTTHHHHHHHHSSCCCCEEEEEECCCHHHHHHHHHHHCC--------C-CBCCCTTTCCHHHHHHTCCCEE
T ss_pred CCEEEEECCChhHHHHHHHHcCCCceEEEEEEECCHHHHHHHHHHCCC--------C-cccCChhhcCHHHhccCCCCEE
Confidence 348999999999999999998742 356 6999999999888876422 1 56788877642 22368999
Q ss_pred EeccccccC-----------CChH-HHHHHHHh-cccC---CcEEEEEeeccCCCCCcchHHHHHHHHHhhccCCccCCC
Q 018740 253 HAGAAIHCW-----------SSPS-TGVAEISR-VLRP---GGVFVGTTYIVDGPFNLIPFSRLLRQNMMQISGSYTFLS 316 (351)
Q Consensus 253 ~~~~vl~h~-----------~d~~-~~l~~i~~-~Lkp---gG~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s 316 (351)
+...-...+ .|+. .++.++.+ +++. .-.+++.+.... +.. . -.
T Consensus 81 ~ggpPCQ~fs~S~ag~~~~~~d~r~~L~~~~~r~~i~~~~~~P~~~~lENV~g-------l~~-----------~---~~ 139 (327)
T 3qv2_A 81 FMSPPCQPYNNSIMSKHKDINDPRAKSVLHLYRDILPYLINKPKHIFIENVPL-------FKE-----------S---LV 139 (327)
T ss_dssp EECCCCTTCSHHHHTTTCTTTCGGGHHHHHHHHTTGGGCSSCCSEEEEEECGG-------GGG-----------S---HH
T ss_pred EecCCccCcccccCCCCCCCccccchhHHHHHHHHHHHhccCCCEEEEEchhh-------hcC-----------h---HH
Confidence 975443333 3554 55666666 5532 123444443321 000 0 12
Q ss_pred HHHHHHHHHHCCCeEEE
Q 018740 317 EREIEDLCRACGLVDFK 333 (351)
Q Consensus 317 ~~~l~~ll~~aGf~~v~ 333 (351)
.+.+.+.|++.|+.+..
T Consensus 140 ~~~i~~~l~~~GY~v~~ 156 (327)
T 3qv2_A 140 FKEIYNILIKNQYYIKD 156 (327)
T ss_dssp HHHHHHHHHHTTCEEEE
T ss_pred HHHHHHHHHhCCCEEEE
Confidence 36788889999998755
No 316
>3tos_A CALS11; methyltransferase, calicheamicin, structural genomic protein structure initiative, PSI, natPro; HET: MSE SAH GLU; 1.55A {Micromonospora echinospora} PDB: 4gf5_A*
Probab=95.58 E-value=0.06 Score=47.20 Aligned_cols=107 Identities=16% Similarity=0.155 Sum_probs=70.4
Q ss_pred CCeEEEEcCccCHHHHHHHHh-------CCCCeEEEEe-----CCHH-------------------HHHHHHHHHh----
Q 018740 178 GGNIIDASCGSGLFSRIFAKS-------GLFSLVVALD-----YSEN-------------------MLKQCYEFVQ---- 222 (351)
Q Consensus 178 ~~~vLDiGcG~G~~~~~l~~~-------~~~~~v~gvD-----~s~~-------------------~~~~a~~~~~---- 222 (351)
++.|+|+|+-.|..+..++.. ++..+++|+| +.+. ..+..++.+.
T Consensus 70 pG~ivE~GV~rG~S~~~~a~~~~~l~~~~~~r~v~~fDTFeG~P~~~~~D~~~~~~~~G~~~~~~~~~~~l~~~l~~~~~ 149 (257)
T 3tos_A 70 PGVIMEFGVRFGRHLGTFAALRGVYEPYNPLRRIVGFDTFTGFPDVNDVDRVGPTAYQGRFAVPGGYPAYLKEVLDAHEC 149 (257)
T ss_dssp CSEEEEECCTTCHHHHHHHHHHHHHCTTCTTCCEEEEECSSCCCSCCGGGTTSTTCSTTTTCCCTTHHHHHHHHHHHHHT
T ss_pred CCeEEEEecccCHHHHHHHHHHHHhcccCCCCEEEEEECCCCCCCCccccccccccccCcccccchhHHHHHHHHHHHhh
Confidence 569999999999988776542 3457999999 3221 0111111111
Q ss_pred --hhCCCCCCCeEEEEecCCC-CC-----CCCCceeeEEeccccccCCChHHHHHHHHhcccCCcEEEEEeec
Q 018740 223 --QESNFPKENFLLVRADISR-LP-----FASSSIDAVHAGAAIHCWSSPSTGVAEISRVLRPGGVFVGTTYI 287 (351)
Q Consensus 223 --~~~g~~~~~i~~~~~d~~~-lp-----~~~~~fD~V~~~~vl~h~~d~~~~l~~i~~~LkpgG~li~~~~~ 287 (351)
.. +....++.++.+++.+ +| .+..++|+|+.-.-. -..-...++.+...|+|||++++-+++
T Consensus 150 ~~~~-g~~~~~i~li~G~~~dTL~~~l~~~~~~~~dlv~ID~D~--Y~~t~~~le~~~p~l~~GGvIv~DD~~ 219 (257)
T 3tos_A 150 SDFF-GHVTQRSVLVEGDVRETVPRYLAENPQTVIALAYFDLDL--YEPTKAVLEAIRPYLTKGSIVAFDELD 219 (257)
T ss_dssp TSTT-TTSCCSEEEEESCHHHHHHHHHHHCTTCCEEEEEECCCC--HHHHHHHHHHHGGGEEEEEEEEESSTT
T ss_pred hhhc-CCCCCcEEEEEecHHHHHHHHHHhCCCCceEEEEEcCcc--cchHHHHHHHHHHHhCCCcEEEEcCCC
Confidence 11 2224789999999865 33 235579999976532 122346789999999999999996654
No 317
>1kol_A Formaldehyde dehydrogenase; oxidoreductase; HET: NAD; 1.65A {Pseudomonas putida} SCOP: b.35.1.2 c.2.1.1
Probab=95.55 E-value=0.11 Score=48.56 Aligned_cols=104 Identities=16% Similarity=0.155 Sum_probs=69.8
Q ss_pred ccCCCCCCeEEEEcCcc-CHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHhhhCCCCCCCeEEEEecCCC-CC------
Q 018740 172 YLKPVLGGNIIDASCGS-GLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISR-LP------ 243 (351)
Q Consensus 172 ~l~~~~~~~vLDiGcG~-G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~g~~~~~i~~~~~d~~~-lp------ 243 (351)
..+..++.+||-+|+|. |.++..+++.....+|+++|.+++-++.+++. ....+..+-.+ +.
T Consensus 180 ~~~~~~g~~VlV~GaG~vG~~aiqlAk~~Ga~~Vi~~~~~~~~~~~a~~l----------Ga~~i~~~~~~~~~~~v~~~ 249 (398)
T 1kol_A 180 TAGVGPGSTVYVAGAGPVGLAAAASARLLGAAVVIVGDLNPARLAHAKAQ----------GFEIADLSLDTPLHEQIAAL 249 (398)
T ss_dssp HTTCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHT----------TCEEEETTSSSCHHHHHHHH
T ss_pred HcCCCCCCEEEEECCcHHHHHHHHHHHHCCCCeEEEEcCCHHHHHHHHHc----------CCcEEccCCcchHHHHHHHH
Confidence 34566788999999876 88888888864223799999999988888763 12222211111 10
Q ss_pred CCCCceeeEEecccc---------ccCCChHHHHHHHHhcccCCcEEEEEe
Q 018740 244 FASSSIDAVHAGAAI---------HCWSSPSTGVAEISRVLRPGGVFVGTT 285 (351)
Q Consensus 244 ~~~~~fD~V~~~~vl---------~h~~d~~~~l~~i~~~LkpgG~li~~~ 285 (351)
.....+|+|+-.-.- .|.+++...++...+.|++||.+++..
T Consensus 250 t~g~g~Dvvid~~G~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~iv~~G 300 (398)
T 1kol_A 250 LGEPEVDCAVDAVGFEARGHGHEGAKHEAPATVLNSLMQVTRVAGKIGIPG 300 (398)
T ss_dssp HSSSCEEEEEECCCTTCBCSSTTGGGSBCTTHHHHHHHHHEEEEEEEEECS
T ss_pred hCCCCCCEEEECCCCcccccccccccccchHHHHHHHHHHHhcCCEEEEec
Confidence 012369999965432 133456667899999999999998754
No 318
>1pft_A TFIIB, PFTFIIBN; N-terminal domain, transcription initiation factor; NMR {Pyrococcus furiosus} SCOP: g.41.3.1
Probab=95.39 E-value=0.0078 Score=38.65 Aligned_cols=33 Identities=18% Similarity=0.436 Sum_probs=24.7
Q ss_pred CceeCCCCCC-CcccccCCCcccccccCCcccccccccccccc
Q 018740 70 NVLACPICYK-PLTWIGDSSLSIESAAGSSLQCNTCKKTYSGV 111 (351)
Q Consensus 70 ~~l~CP~C~~-~l~~~~~~~~~~~~~~~~~~~C~~C~~~~~~~ 111 (351)
..+.||.|++ +|..+. ..+.+.|..||..|...
T Consensus 4 ~~~~CP~C~~~~l~~d~---------~~gelvC~~CG~v~~e~ 37 (50)
T 1pft_A 4 KQKVCPACESAELIYDP---------ERGEIVCAKCGYVIEEN 37 (50)
T ss_dssp SCCSCTTTSCCCEEEET---------TTTEEEESSSCCBCCCC
T ss_pred ccEeCcCCCCcceEEcC---------CCCeEECcccCCccccc
Confidence 3578999999 665543 34789999999988643
No 319
>2py6_A Methyltransferase FKBM; YP_546752.1, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; 2.15A {Methylobacillus flagellatus KT} SCOP: c.66.1.56
Probab=95.35 E-value=0.046 Score=51.50 Aligned_cols=67 Identities=7% Similarity=-0.013 Sum_probs=50.5
Q ss_pred CCCCCeEEEEcCccCHHHHHHH-HhCC-CCeEEEEeCCHHHHHHHHHHHhhhCCCCC-CCeEEEEecCCC
Q 018740 175 PVLGGNIIDASCGSGLFSRIFA-KSGL-FSLVVALDYSENMLKQCYEFVQQESNFPK-ENFLLVRADISR 241 (351)
Q Consensus 175 ~~~~~~vLDiGcG~G~~~~~l~-~~~~-~~~v~gvD~s~~~~~~a~~~~~~~~g~~~-~~i~~~~~d~~~ 241 (351)
..++..++|||++.|.++..++ +.++ ..+|+++|+++...+..+++++...+... .++.++..-+.+
T Consensus 224 l~~~~~viDvGAn~G~~s~~~a~~~~~~~~~V~afEP~p~~~~~L~~n~~~~~N~~~~~~v~~~~~al~~ 293 (409)
T 2py6_A 224 FSDSEKMVDCGASIGESLAGLIGVTKGKFERVWMIEPDRINLQTLQNVLRRYTDTNFASRITVHGCGAGE 293 (409)
T ss_dssp CCSSCEEEEETCTTSHHHHHHHHHHTSCCSEEEEECCCHHHHHHHHHHHHHTTTSTTGGGEEEECSEECS
T ss_pred cCCCCEEEECCCCcCHHHHHHHHHhcCCCCEEEEEcCCHHHHHHHHHHHHhhhccCCCCCEEEEEeEEEC
Confidence 4678899999999999999887 4543 36999999999999999998876100013 577776655543
No 320
>1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1
Probab=95.33 E-value=0.07 Score=49.35 Aligned_cols=101 Identities=15% Similarity=0.137 Sum_probs=66.3
Q ss_pred hccCCCCCCeEEEEcCcc-CHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHhhhCCCCCCCeEEEEecCCCC-----CC
Q 018740 171 GYLKPVLGGNIIDASCGS-GLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRL-----PF 244 (351)
Q Consensus 171 ~~l~~~~~~~vLDiGcG~-G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~g~~~~~i~~~~~d~~~l-----p~ 244 (351)
...+..++.+||-+|+|. |.++..+++.....+|+++|.++..++.+++. | .. ..+..+-.++ ..
T Consensus 184 ~~~~~~~g~~VlV~GaG~vG~~a~qlak~~Ga~~Vi~~~~~~~~~~~a~~l-----G---a~-~vi~~~~~~~~~~~~~~ 254 (371)
T 1f8f_A 184 NALKVTPASSFVTWGAGAVGLSALLAAKVCGASIIIAVDIVESRLELAKQL-----G---AT-HVINSKTQDPVAAIKEI 254 (371)
T ss_dssp TTTCCCTTCEEEEESCSHHHHHHHHHHHHHTCSEEEEEESCHHHHHHHHHH-----T---CS-EEEETTTSCHHHHHHHH
T ss_pred hccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHHHc-----C---CC-EEecCCccCHHHHHHHh
Confidence 445667789999999986 88888887763222699999999988888764 1 11 1222111111 01
Q ss_pred CCCceeeEEeccccccCCChHHHHHHHHhcccCCcEEEEEee
Q 018740 245 ASSSIDAVHAGAAIHCWSSPSTGVAEISRVLRPGGVFVGTTY 286 (351)
Q Consensus 245 ~~~~fD~V~~~~vl~h~~d~~~~l~~i~~~LkpgG~li~~~~ 286 (351)
..+.+|+|+-.-. . ...++...+.|+++|.+++...
T Consensus 255 ~~gg~D~vid~~g-----~-~~~~~~~~~~l~~~G~iv~~G~ 290 (371)
T 1f8f_A 255 TDGGVNFALESTG-----S-PEILKQGVDALGILGKIAVVGA 290 (371)
T ss_dssp TTSCEEEEEECSC-----C-HHHHHHHHHTEEEEEEEEECCC
T ss_pred cCCCCcEEEECCC-----C-HHHHHHHHHHHhcCCEEEEeCC
Confidence 1236999984332 2 3457889999999999987644
No 321
>2dph_A Formaldehyde dismutase; dismutation of aldehydes, oxidoreductase; HET: NAD; 2.27A {Pseudomonas putida}
Probab=95.23 E-value=0.096 Score=48.97 Aligned_cols=104 Identities=16% Similarity=0.099 Sum_probs=67.8
Q ss_pred hccCCCCCCeEEEEcCcc-CHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHhhhCCCCCCCeEEEEecCCCC-C-----
Q 018740 171 GYLKPVLGGNIIDASCGS-GLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRL-P----- 243 (351)
Q Consensus 171 ~~l~~~~~~~vLDiGcG~-G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~g~~~~~i~~~~~d~~~l-p----- 243 (351)
...+..++.+||-+|+|. |.++..+++.....+|+++|.+++.++.+++. ....+..+-.++ .
T Consensus 179 ~~~~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~l----------Ga~~i~~~~~~~~~~~~~~ 248 (398)
T 2dph_A 179 VSAGVKPGSHVYIAGAGPVGRCAAAGARLLGAACVIVGDQNPERLKLLSDA----------GFETIDLRNSAPLRDQIDQ 248 (398)
T ss_dssp HHTTCCTTCEEEEECCSHHHHHHHHHHHHHTCSEEEEEESCHHHHHHHHTT----------TCEEEETTSSSCHHHHHHH
T ss_pred HHcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHc----------CCcEEcCCCcchHHHHHHH
Confidence 345667789999999986 88888888763223899999999988887642 123332211111 0
Q ss_pred C-CCCceeeEEeccccc---------cCCChHHHHHHHHhcccCCcEEEEEe
Q 018740 244 F-ASSSIDAVHAGAAIH---------CWSSPSTGVAEISRVLRPGGVFVGTT 285 (351)
Q Consensus 244 ~-~~~~fD~V~~~~vl~---------h~~d~~~~l~~i~~~LkpgG~li~~~ 285 (351)
. ....+|+|+-.-.-. |. ++...++++.+.|+++|++++..
T Consensus 249 ~~~g~g~Dvvid~~g~~~~~~~~~~~~~-~~~~~~~~~~~~l~~gG~iv~~G 299 (398)
T 2dph_A 249 ILGKPEVDCGVDAVGFEAHGLGDEANTE-TPNGALNSLFDVVRAGGAIGIPG 299 (398)
T ss_dssp HHSSSCEEEEEECSCTTCBCSGGGTTSB-CTTHHHHHHHHHEEEEEEEECCS
T ss_pred HhCCCCCCEEEECCCCcccccccccccc-ccHHHHHHHHHHHhcCCEEEEec
Confidence 0 123699998654322 11 23356889999999999987654
No 322
>3g7u_A Cytosine-specific methyltransferase; DNA-binding, NAD-binding, structural GENO protein structure initiative, PSI; 1.75A {Escherichia coli O157}
Probab=95.03 E-value=0.058 Score=50.18 Aligned_cols=72 Identities=24% Similarity=0.265 Sum_probs=56.6
Q ss_pred CeEEEEcCccCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHhhhCCCCCCCeEEEEecCCCCCC--------CCCcee
Q 018740 179 GNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLPF--------ASSSID 250 (351)
Q Consensus 179 ~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~g~~~~~i~~~~~d~~~lp~--------~~~~fD 250 (351)
.+++|+-||.|.++..+.+.|. ..+.++|+++.+++..+.+ .++..++.+|+.++.. ....+|
T Consensus 3 ~~vidLFsG~GGlslG~~~aG~-~~v~avE~d~~a~~t~~~N--------~~~~~~~~~DI~~~~~~~~~~~~~~~~~~D 73 (376)
T 3g7u_A 3 LNVIDLFSGVGGLSLGAARAGF-DVKMAVEIDQHAINTHAIN--------FPRSLHVQEDVSLLNAEIIKGFFKNDMPID 73 (376)
T ss_dssp CEEEEETCTTSHHHHHHHHHTC-EEEEEECSCHHHHHHHHHH--------CTTSEEECCCGGGCCHHHHHHHHCSCCCCC
T ss_pred CeEEEEccCcCHHHHHHHHCCC-cEEEEEeCCHHHHHHHHHh--------CCCCceEecChhhcCHHHHHhhcccCCCee
Confidence 3799999999999999999985 3567999999998888876 4566788899887631 245799
Q ss_pred eEEeccccc
Q 018740 251 AVHAGAAIH 259 (351)
Q Consensus 251 ~V~~~~vl~ 259 (351)
+|+..--.+
T Consensus 74 ~i~ggpPCQ 82 (376)
T 3g7u_A 74 GIIGGPPCQ 82 (376)
T ss_dssp EEEECCCCC
T ss_pred EEEecCCCC
Confidence 999754433
No 323
>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A*
Probab=94.98 E-value=0.66 Score=42.71 Aligned_cols=102 Identities=16% Similarity=0.158 Sum_probs=67.1
Q ss_pred hccCCCCCCeEEEEcCcc-CHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHhhhCCCCCCCeEEEEecCCCC-------
Q 018740 171 GYLKPVLGGNIIDASCGS-GLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRL------- 242 (351)
Q Consensus 171 ~~l~~~~~~~vLDiGcG~-G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~g~~~~~i~~~~~d~~~l------- 242 (351)
...+..++.+||-+|+|. |.++..+++.....+|+++|.++.-.+.+++. | .. ..+...-.++
T Consensus 176 ~~~~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~l-----G--a~--~vi~~~~~~~~~~i~~~ 246 (370)
T 4ej6_A 176 DLSGIKAGSTVAILGGGVIGLLTVQLARLAGATTVILSTRQATKRRLAEEV-----G--AT--ATVDPSAGDVVEAIAGP 246 (370)
T ss_dssp HHHTCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCHHHHHHHHHH-----T--CS--EEECTTSSCHHHHHHST
T ss_pred HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHc-----C--CC--EEECCCCcCHHHHHHhh
Confidence 344566788999999875 77888888764323899999999988888774 1 11 1111111110
Q ss_pred -CCCCCceeeEEeccccccCCChHHHHHHHHhcccCCcEEEEEeec
Q 018740 243 -PFASSSIDAVHAGAAIHCWSSPSTGVAEISRVLRPGGVFVGTTYI 287 (351)
Q Consensus 243 -p~~~~~fD~V~~~~vl~h~~d~~~~l~~i~~~LkpgG~li~~~~~ 287 (351)
....+.+|+|+-.- .. ...++...+.|++||.+++....
T Consensus 247 ~~~~~gg~Dvvid~~-----G~-~~~~~~~~~~l~~~G~vv~~G~~ 286 (370)
T 4ej6_A 247 VGLVPGGVDVVIECA-----GV-AETVKQSTRLAKAGGTVVILGVL 286 (370)
T ss_dssp TSSSTTCEEEEEECS-----CC-HHHHHHHHHHEEEEEEEEECSCC
T ss_pred hhccCCCCCEEEECC-----CC-HHHHHHHHHHhccCCEEEEEecc
Confidence 02234799998532 22 34578899999999999886543
No 324
>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}
Probab=94.84 E-value=0.12 Score=47.35 Aligned_cols=94 Identities=13% Similarity=0.119 Sum_probs=64.9
Q ss_pred cCCCCCCeEEEEcCcc-CHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHhhhCCCCCCCeEEEEecCCCCCCCCCceee
Q 018740 173 LKPVLGGNIIDASCGS-GLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLPFASSSIDA 251 (351)
Q Consensus 173 l~~~~~~~vLDiGcG~-G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~g~~~~~i~~~~~d~~~lp~~~~~fD~ 251 (351)
.+..++.+||-+|+|. |.++..+++.. ..+|+++|.+++-++.+++. | ... .+ .+...+. ..+|+
T Consensus 172 ~~~~~g~~VlV~GaG~vG~~a~qla~~~-Ga~Vi~~~~~~~~~~~~~~l-----G--a~~--v~-~~~~~~~---~~~D~ 237 (348)
T 3two_A 172 SKVTKGTKVGVAGFGGLGSMAVKYAVAM-GAEVSVFARNEHKKQDALSM-----G--VKH--FY-TDPKQCK---EELDF 237 (348)
T ss_dssp TTCCTTCEEEEESCSHHHHHHHHHHHHT-TCEEEEECSSSTTHHHHHHT-----T--CSE--EE-SSGGGCC---SCEEE
T ss_pred cCCCCCCEEEEECCcHHHHHHHHHHHHC-CCeEEEEeCCHHHHHHHHhc-----C--CCe--ec-CCHHHHh---cCCCE
Confidence 3667789999999876 77888887764 34999999999888888763 1 121 22 3333222 27999
Q ss_pred EEeccccccCCChHHHHHHHHhcccCCcEEEEEee
Q 018740 252 VHAGAAIHCWSSPSTGVAEISRVLRPGGVFVGTTY 286 (351)
Q Consensus 252 V~~~~vl~h~~d~~~~l~~i~~~LkpgG~li~~~~ 286 (351)
|+-.-. .+ ..+....+.|+|+|.+++...
T Consensus 238 vid~~g-----~~-~~~~~~~~~l~~~G~iv~~G~ 266 (348)
T 3two_A 238 IISTIP-----TH-YDLKDYLKLLTYNGDLALVGL 266 (348)
T ss_dssp EEECCC-----SC-CCHHHHHTTEEEEEEEEECCC
T ss_pred EEECCC-----cH-HHHHHHHHHHhcCCEEEEECC
Confidence 985332 11 136788899999999988644
No 325
>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1
Probab=94.83 E-value=0.15 Score=42.45 Aligned_cols=96 Identities=18% Similarity=0.218 Sum_probs=61.5
Q ss_pred hccCCCCCCeEEEEcC--ccCHHHHHHHH-hCCCCeEEEEeCCHHHHHHHHHHHhhhCCCCCCCeEEEEecCCCCC----
Q 018740 171 GYLKPVLGGNIIDASC--GSGLFSRIFAK-SGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLP---- 243 (351)
Q Consensus 171 ~~l~~~~~~~vLDiGc--G~G~~~~~l~~-~~~~~~v~gvD~s~~~~~~a~~~~~~~~g~~~~~i~~~~~d~~~lp---- 243 (351)
...+..++.+||.+|+ |.|.....+++ .|. +|+++|.+++..+.+++. .... . .|..+..
T Consensus 32 ~~~~~~~g~~vlV~Ga~ggiG~~~~~~~~~~G~--~V~~~~~~~~~~~~~~~~--------g~~~-~--~d~~~~~~~~~ 98 (198)
T 1pqw_A 32 EVGRLSPGERVLIHSATGGVGMAAVSIAKMIGA--RIYTTAGSDAKREMLSRL--------GVEY-V--GDSRSVDFADE 98 (198)
T ss_dssp TTSCCCTTCEEEETTTTSHHHHHHHHHHHHHTC--EEEEEESSHHHHHHHHTT--------CCSE-E--EETTCSTHHHH
T ss_pred HHhCCCCCCEEEEeeCCChHHHHHHHHHHHcCC--EEEEEeCCHHHHHHHHHc--------CCCE-E--eeCCcHHHHHH
Confidence 3445667889999994 45665555544 454 999999998877666531 1111 1 2332211
Q ss_pred ----CCCCceeeEEeccccccCCChHHHHHHHHhcccCCcEEEEEee
Q 018740 244 ----FASSSIDAVHAGAAIHCWSSPSTGVAEISRVLRPGGVFVGTTY 286 (351)
Q Consensus 244 ----~~~~~fD~V~~~~vl~h~~d~~~~l~~i~~~LkpgG~li~~~~ 286 (351)
.....+|+|+.+.. ...++...+.|+|+|+++....
T Consensus 99 ~~~~~~~~~~D~vi~~~g-------~~~~~~~~~~l~~~G~~v~~g~ 138 (198)
T 1pqw_A 99 ILELTDGYGVDVVLNSLA-------GEAIQRGVQILAPGGRFIELGK 138 (198)
T ss_dssp HHHHTTTCCEEEEEECCC-------THHHHHHHHTEEEEEEEEECSC
T ss_pred HHHHhCCCCCeEEEECCc-------hHHHHHHHHHhccCCEEEEEcC
Confidence 11246999996542 1457888999999999887654
No 326
>1boo_A Protein (N-4 cytosine-specific methyltransferase PVU II); type II DNA-(cytosine N4) methyltransferase, amino methylation, selenomethionine; HET: SAH; 2.80A {Proteus vulgaris} SCOP: c.66.1.11
Probab=94.72 E-value=0.057 Score=49.12 Aligned_cols=61 Identities=11% Similarity=0.044 Sum_probs=50.7
Q ss_pred CcHHHHHHHHhccCCCCCCeEEEEcCccCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHhhh
Q 018740 161 GPEKEFELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQE 224 (351)
Q Consensus 161 ~~~~~~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~ 224 (351)
-+..+.+.+..... .++..|||.-||+|..+.+..+.+. +.+|+|+++..++.+++++...
T Consensus 237 kp~~l~~~~i~~~~-~~~~~VlDpF~GsGtt~~aa~~~gr--~~ig~e~~~~~~~~~~~r~~~~ 297 (323)
T 1boo_A 237 FPAKLPEFFIRMLT-EPDDLVVDIFGGSNTTGLVAERESR--KWISFEMKPEYVAASAFRFLDN 297 (323)
T ss_dssp CCTHHHHHHHHHHC-CTTCEEEETTCTTCHHHHHHHHTTC--EEEEEESCHHHHHHHHGGGSCS
T ss_pred CCHHHHHHHHHHhC-CCCCEEEECCCCCCHHHHHHHHcCC--CEEEEeCCHHHHHHHHHHHHhc
Confidence 34566667666543 4588999999999999999999887 9999999999999999987654
No 327
>1g55_A DNA cytosine methyltransferase DNMT2; human DNA methyltransferase homologue; HET: DNA SAH; 1.80A {Homo sapiens} SCOP: c.66.1.26
Probab=94.70 E-value=0.034 Score=51.13 Aligned_cols=71 Identities=14% Similarity=0.137 Sum_probs=54.9
Q ss_pred CeEEEEcCccCHHHHHHHHhCCC-CeEEEEeCCHHHHHHHHHHHhhhCCCCCCCeEEEEecCCCCCC---CCCceeeEEe
Q 018740 179 GNIIDASCGSGLFSRIFAKSGLF-SLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLPF---ASSSIDAVHA 254 (351)
Q Consensus 179 ~~vLDiGcG~G~~~~~l~~~~~~-~~v~gvD~s~~~~~~a~~~~~~~~g~~~~~i~~~~~d~~~lp~---~~~~fD~V~~ 254 (351)
.+|+|+-||.|.+...+...|.. ..|.++|+++.+++..+.++ ++..++.+|+.++.. +...+|+|+.
T Consensus 3 ~~v~dLFaG~Gg~~~g~~~~G~~~~~v~~~E~d~~a~~~~~~N~--------~~~~~~~~Di~~~~~~~~~~~~~D~l~~ 74 (343)
T 1g55_A 3 LRVLELYSGVGGMHHALRESCIPAQVVAAIDVNTVANEVYKYNF--------PHTQLLAKTIEGITLEEFDRLSFDMILM 74 (343)
T ss_dssp EEEEEETCTTCHHHHHHHHHTCSEEEEEEECCCHHHHHHHHHHC--------TTSCEECSCGGGCCHHHHHHHCCSEEEE
T ss_pred CeEEEeCcCccHHHHHHHHCCCCceEEEEEeCCHHHHHHHHHhc--------cccccccCCHHHccHhHcCcCCcCEEEE
Confidence 47999999999999999998731 36899999999999998873 444577889887642 1125899997
Q ss_pred ccc
Q 018740 255 GAA 257 (351)
Q Consensus 255 ~~v 257 (351)
..-
T Consensus 75 gpP 77 (343)
T 1g55_A 75 SPP 77 (343)
T ss_dssp CCC
T ss_pred cCC
Confidence 644
No 328
>1eg2_A Modification methylase RSRI; rossmann fold, exocyclic amino DNA methyltransferase RSRI, D binding, DNA modification, DNA methylation; HET: MTA; 1.75A {Rhodobacter sphaeroides} SCOP: c.66.1.11 PDB: 1nw5_A* 1nw6_A* 1nw7_A* 1nw8_A
Probab=94.49 E-value=0.093 Score=47.63 Aligned_cols=61 Identities=21% Similarity=0.342 Sum_probs=49.6
Q ss_pred CcHHHHHHHHhccCCCCCCeEEEEcCccCHHHHHHHHhCCCCeEEEEeCCH---HHHHHHHHHHhhh
Q 018740 161 GPEKEFELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSE---NMLKQCYEFVQQE 224 (351)
Q Consensus 161 ~~~~~~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~---~~~~~a~~~~~~~ 224 (351)
-+..+++.+..... .++..|||.-||+|..+.+..+.+. +.+|+|+++ ..++.+++++...
T Consensus 227 kp~~l~~~~i~~~~-~~~~~vlDpF~GsGtt~~aa~~~~r--~~ig~e~~~~~~~~~~~~~~Rl~~~ 290 (319)
T 1eg2_A 227 KPAAVIERLVRALS-HPGSTVLDFFAGSGVTARVAIQEGR--NSICTDAAPVFKEYYQKQLTFLQDD 290 (319)
T ss_dssp CCHHHHHHHHHHHS-CTTCEEEETTCTTCHHHHHHHHHTC--EEEEEESSTHHHHHHHHHHHHC---
T ss_pred CCHHHHHHHHHHhC-CCCCEEEecCCCCCHHHHHHHHcCC--cEEEEECCccHHHHHHHHHHHHHHc
Confidence 45667777776654 4588999999999999999999887 999999999 9999999986544
No 329
>3ps9_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; rossmann fold, oxidase, methyl transferase, FAD; HET: FAD SAM; 2.54A {Escherichia coli} PDB: 3awi_A*
Probab=94.27 E-value=0.26 Score=49.41 Aligned_cols=127 Identities=15% Similarity=0.114 Sum_probs=77.4
Q ss_pred CCeEEEEcCccCHHHHHHHHhC-------C-----CCeEEEEeC---CHHHHHHHHH-----------HHhhhCCC----
Q 018740 178 GGNIIDASCGSGLFSRIFAKSG-------L-----FSLVVALDY---SENMLKQCYE-----------FVQQESNF---- 227 (351)
Q Consensus 178 ~~~vLDiGcG~G~~~~~l~~~~-------~-----~~~v~gvD~---s~~~~~~a~~-----------~~~~~~g~---- 227 (351)
.-+|||+|-|+|.+.....+.. | ..+++++|. +.+.+..+-. ....+...
T Consensus 67 ~~~i~e~gfG~Gln~l~~~~~~~~~~~~~p~~~~~~l~~~s~E~~p~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 146 (676)
T 3ps9_A 67 LFVVAESGFGTGLNFLTLWQAFDQFREAHPQAQLQRLHFISFEKFPLTRADLALAHQHWPELAPWAEQLQAQWPMPLPGC 146 (676)
T ss_dssp EEEEEEECCTTSHHHHHHHHHHHHHHHHCTTSSCCEEEEEEEESSCCCHHHHHHHHTTCGGGHHHHHHHHHHCCCCCSEE
T ss_pred ceEEEEeCCchHHHHHHHHHHHHHhhhhCcCCCCceEEEEEEeCCCCCHHHHHHHHHhChhhHHHHHHHHHhCcccCCCc
Confidence 4589999999999766554431 1 235899998 7776664332 11111000
Q ss_pred -------CCCCeEEEEecCCC-CC-C--C-CCceeeEEeccccccCCCh----HHHHHHHHhcccCCcEEEEEeeccCCC
Q 018740 228 -------PKENFLLVRADISR-LP-F--A-SSSIDAVHAGAAIHCWSSP----STGVAEISRVLRPGGVFVGTTYIVDGP 291 (351)
Q Consensus 228 -------~~~~i~~~~~d~~~-lp-~--~-~~~fD~V~~~~vl~h~~d~----~~~l~~i~~~LkpgG~li~~~~~~~~~ 291 (351)
....+++..+|+.+ ++ + . ...||+|+.-.. ---.+| ..+++.+.++++|||.+.- +.
T Consensus 147 ~~~~~~~~~~~l~l~~gd~~~~l~~~~~~~~~~~d~~~~D~f-~p~~np~~w~~~~~~~l~~~~~~g~~~~t--~~---- 219 (676)
T 3ps9_A 147 HRLLLDAGRVTLDLWFGDINELTSQLDDSLNQKVDAWFLDGF-APAKNPDMWTQNLFNAMARLARPGGTLAT--FT---- 219 (676)
T ss_dssp EEEEEGGGTEEEEEEESCHHHHGGGBCGGGTTCEEEEEECCS-CGGGCGGGSCHHHHHHHHHHEEEEEEEEE--SC----
T ss_pred eEEEecCCcEEEEEecCCHHHHHHhcccccCCcccEEEECCC-CCcCChhhhhHHHHHHHHHHhCCCCEEEe--cc----
Confidence 01234556666643 22 1 1 467999987432 111233 4789999999999998663 11
Q ss_pred CCcchHHHHHHHHHhhccCCccCCCHHHHHHHHHHCCCeEEEEE
Q 018740 292 FNLIPFSRLLRQNMMQISGSYTFLSEREIEDLCRACGLVDFKCT 335 (351)
Q Consensus 292 ~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~~ll~~aGf~~v~~~ 335 (351)
....+++.|.++||.+.+..
T Consensus 220 ------------------------~~~~vr~~L~~aGf~v~~~~ 239 (676)
T 3ps9_A 220 ------------------------SAGFVRRGLQDAGFTMQKRK 239 (676)
T ss_dssp ------------------------CCHHHHHHHHHHTCEEEEEE
T ss_pred ------------------------CcHHHHHHHHhCCeEEEecc
Confidence 12467888899999876644
No 330
>3pvc_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; structural genomics, PSI-biology; HET: FAD; 2.31A {Yersinia pestis} PDB: 3sgl_A*
Probab=94.20 E-value=0.19 Score=50.59 Aligned_cols=128 Identities=15% Similarity=0.118 Sum_probs=77.9
Q ss_pred CCeEEEEcCccCHHHHHHHHhC-------C-----CCeEEEEeC---CHHHHHHHHH-----------HHhhhC----C-
Q 018740 178 GGNIIDASCGSGLFSRIFAKSG-------L-----FSLVVALDY---SENMLKQCYE-----------FVQQES----N- 226 (351)
Q Consensus 178 ~~~vLDiGcG~G~~~~~l~~~~-------~-----~~~v~gvD~---s~~~~~~a~~-----------~~~~~~----g- 226 (351)
.-+|+|+|-|+|.....+.+.. | ..+++.+|. +.+.+..+-. .+..+. |
T Consensus 59 ~~~i~e~gfG~G~n~l~~~~~~~~~~~~~p~~~~~~l~~~s~E~~p~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 138 (689)
T 3pvc_A 59 SCIFAETGFGTGLNFLTLWRDFALFRQQSPNATLRRLHYISFEKYPLHVADLASAHARWPELASFAEQLRAQWPLPLAGC 138 (689)
T ss_dssp EEEEEEECCTTSHHHHHHHHHHHHHHHHCTTSSCCEEEEEEEESSCCCHHHHHHHHTTCGGGHHHHHHHHHTCCCCCSEE
T ss_pred ceEEEEecCchHHHHHHHHHHHHHhhhhCCCCCCceEEEEEeeCCCCCHHHHHHHHHhCcchhHHHHHHHHhCcccCCCc
Confidence 4589999999999776665531 1 146899998 4444443321 122110 0
Q ss_pred ------CCCCCeEEEEecCCC-CC-CC---CCceeeEEecccc-ccCCC--hHHHHHHHHhcccCCcEEEEEeeccCCCC
Q 018740 227 ------FPKENFLLVRADISR-LP-FA---SSSIDAVHAGAAI-HCWSS--PSTGVAEISRVLRPGGVFVGTTYIVDGPF 292 (351)
Q Consensus 227 ------~~~~~i~~~~~d~~~-lp-~~---~~~fD~V~~~~vl-~h~~d--~~~~l~~i~~~LkpgG~li~~~~~~~~~~ 292 (351)
.+...++++.+|+.+ ++ +. +..+|+++.-..- ..-++ ...++..+.++++|||.+.- +.
T Consensus 139 ~r~~~~~~~~~l~l~~gd~~~~l~~~~~~~~~~~da~flD~f~p~~np~~w~~~~~~~l~~~~~~g~~~~t--~~----- 211 (689)
T 3pvc_A 139 HRILLADGAITLDLWFGDVNTLLPTLDDSLNNQVDAWFLDGFAPAKNPDMWNEQLFNAMARMTRPGGTFST--FT----- 211 (689)
T ss_dssp EEEEETTTTEEEEEEESCHHHHGGGCCGGGTTCEEEEEECSSCC--CCTTCSHHHHHHHHHHEEEEEEEEE--SC-----
T ss_pred eEEEecCCcEEEEEEccCHHHHHhhcccccCCceeEEEECCCCCCCChhhhhHHHHHHHHHHhCCCCEEEe--cc-----
Confidence 001256677788743 22 11 4689999974421 11111 15789999999999997653 11
Q ss_pred CcchHHHHHHHHHhhccCCccCCCHHHHHHHHHHCCCeEEEEE
Q 018740 293 NLIPFSRLLRQNMMQISGSYTFLSEREIEDLCRACGLVDFKCT 335 (351)
Q Consensus 293 ~~~~~~~~~~~~~~~~~~~~~~~s~~~l~~ll~~aGf~~v~~~ 335 (351)
....+++.|.++||.+.+..
T Consensus 212 -----------------------~~~~vr~~l~~aGf~~~~~~ 231 (689)
T 3pvc_A 212 -----------------------AAGFVRRGLQQAGFNVTKVK 231 (689)
T ss_dssp -----------------------CCHHHHHHHHHTTCEEEEEE
T ss_pred -----------------------CcHHHHHHHHhCCeEEEecc
Confidence 22468888999999877644
No 331
>1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A*
Probab=94.09 E-value=0.23 Score=44.98 Aligned_cols=97 Identities=9% Similarity=-0.040 Sum_probs=62.9
Q ss_pred hccCCCCCCeEEEEcC--ccCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHhhhCCCCCCCeEEEEecCCC-CC----
Q 018740 171 GYLKPVLGGNIIDASC--GSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISR-LP---- 243 (351)
Q Consensus 171 ~~l~~~~~~~vLDiGc--G~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~g~~~~~i~~~~~d~~~-lp---- 243 (351)
...+..++.+||-.|+ |.|.....+++.. +.+|+++|.+++.++.+++. ... ...|..+ -.
T Consensus 139 ~~~~~~~g~~vlV~Ga~ggiG~~~~~~~~~~-G~~V~~~~~~~~~~~~~~~~--------g~~---~~~d~~~~~~~~~~ 206 (333)
T 1v3u_A 139 EVCGVKGGETVLVSAAAGAVGSVVGQIAKLK-GCKVVGAAGSDEKIAYLKQI--------GFD---AAFNYKTVNSLEEA 206 (333)
T ss_dssp TTSCCCSSCEEEEESTTBHHHHHHHHHHHHT-TCEEEEEESSHHHHHHHHHT--------TCS---EEEETTSCSCHHHH
T ss_pred HhhCCCCCCEEEEecCCCcHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHhc--------CCc---EEEecCCHHHHHHH
Confidence 4455667889999998 4576666665542 23999999999888777432 111 1123322 10
Q ss_pred ---CCCCceeeEEeccccccCCChHHHHHHHHhcccCCcEEEEEee
Q 018740 244 ---FASSSIDAVHAGAAIHCWSSPSTGVAEISRVLRPGGVFVGTTY 286 (351)
Q Consensus 244 ---~~~~~fD~V~~~~vl~h~~d~~~~l~~i~~~LkpgG~li~~~~ 286 (351)
...+.+|+|+.+..- ..++...+.|+++|.+++...
T Consensus 207 ~~~~~~~~~d~vi~~~g~-------~~~~~~~~~l~~~G~~v~~g~ 245 (333)
T 1v3u_A 207 LKKASPDGYDCYFDNVGG-------EFLNTVLSQMKDFGKIAICGA 245 (333)
T ss_dssp HHHHCTTCEEEEEESSCH-------HHHHHHHTTEEEEEEEEECCC
T ss_pred HHHHhCCCCeEEEECCCh-------HHHHHHHHHHhcCCEEEEEec
Confidence 112469999865441 347888899999999987543
No 332
>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=94.03 E-value=0.14 Score=47.33 Aligned_cols=95 Identities=17% Similarity=0.164 Sum_probs=62.9
Q ss_pred cCCCCCCeEEEEcCcc-CHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHhhhCCCCCCCeEEEEe---c-CCCCCCCCC
Q 018740 173 LKPVLGGNIIDASCGS-GLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRA---D-ISRLPFASS 247 (351)
Q Consensus 173 l~~~~~~~vLDiGcG~-G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~g~~~~~i~~~~~---d-~~~lp~~~~ 247 (351)
.+..++.+||-+|+|. |.++..+++.. ..+|+++|.+++.++.+++. | .. .++.. + ...+. +
T Consensus 190 ~~~~~g~~VlV~GaG~vG~~aiqlak~~-Ga~Vi~~~~~~~~~~~a~~l-----G--a~--~vi~~~~~~~~~~~~---~ 256 (369)
T 1uuf_A 190 WQAGPGKKVGVVGIGGLGHMGIKLAHAM-GAHVVAFTTSEAKREAAKAL-----G--AD--EVVNSRNADEMAAHL---K 256 (369)
T ss_dssp TTCCTTCEEEEECCSHHHHHHHHHHHHT-TCEEEEEESSGGGHHHHHHH-----T--CS--EEEETTCHHHHHTTT---T
T ss_pred cCCCCCCEEEEECCCHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHc-----C--Cc--EEeccccHHHHHHhh---c
Confidence 3566789999999975 77777777753 34899999999988888763 1 11 11211 1 11111 4
Q ss_pred ceeeEEeccccccCCChHHHHHHHHhcccCCcEEEEEee
Q 018740 248 SIDAVHAGAAIHCWSSPSTGVAEISRVLRPGGVFVGTTY 286 (351)
Q Consensus 248 ~fD~V~~~~vl~h~~d~~~~l~~i~~~LkpgG~li~~~~ 286 (351)
.+|+|+..-.-. ..++...+.|+++|.++....
T Consensus 257 g~Dvvid~~g~~------~~~~~~~~~l~~~G~iv~~G~ 289 (369)
T 1uuf_A 257 SFDFILNTVAAP------HNLDDFTTLLKRDGTMTLVGA 289 (369)
T ss_dssp CEEEEEECCSSC------CCHHHHHTTEEEEEEEEECCC
T ss_pred CCCEEEECCCCH------HHHHHHHHHhccCCEEEEecc
Confidence 699998543321 136778899999999887543
No 333
>3goh_A Alcohol dehydrogenase, zinc-containing; NP_718042.1, alcohol dehydrogenase superfamily protein, ALCO dehydrogenase groes-like domain; 1.55A {Shewanella oneidensis}
Probab=94.01 E-value=0.13 Score=46.40 Aligned_cols=93 Identities=9% Similarity=0.034 Sum_probs=61.4
Q ss_pred hccCCCCCCeEEEEcCcc-CHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHhhhCCCCCCCeEEEEecCCCCCCCCCce
Q 018740 171 GYLKPVLGGNIIDASCGS-GLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLPFASSSI 249 (351)
Q Consensus 171 ~~l~~~~~~~vLDiGcG~-G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~g~~~~~i~~~~~d~~~lp~~~~~f 249 (351)
...+..++.+||-+|+|. |.++..+++.. +.+|++++ +++-.+.+++. ....+..|...+ .+.+
T Consensus 136 ~~~~~~~g~~VlV~GaG~vG~~a~qlak~~-Ga~Vi~~~-~~~~~~~~~~l----------Ga~~v~~d~~~v---~~g~ 200 (315)
T 3goh_A 136 EKIPLTKQREVLIVGFGAVNNLLTQMLNNA-GYVVDLVS-ASLSQALAAKR----------GVRHLYREPSQV---TQKY 200 (315)
T ss_dssp TTSCCCSCCEEEEECCSHHHHHHHHHHHHH-TCEEEEEC-SSCCHHHHHHH----------TEEEEESSGGGC---CSCE
T ss_pred hhcCCCCCCEEEEECCCHHHHHHHHHHHHc-CCEEEEEE-ChhhHHHHHHc----------CCCEEEcCHHHh---CCCc
Confidence 555667889999999964 77777777763 23999999 98888888764 112222232223 4679
Q ss_pred eeEEeccccccCCChHHHHHHHHhcccCCcEEEEEe
Q 018740 250 DAVHAGAAIHCWSSPSTGVAEISRVLRPGGVFVGTT 285 (351)
Q Consensus 250 D~V~~~~vl~h~~d~~~~l~~i~~~LkpgG~li~~~ 285 (351)
|+|+-.-. .+ .+....+.|+++|.++...
T Consensus 201 Dvv~d~~g-----~~--~~~~~~~~l~~~G~~v~~g 229 (315)
T 3goh_A 201 FAIFDAVN-----SQ--NAAALVPSLKANGHIICIQ 229 (315)
T ss_dssp EEEECC--------------TTGGGEEEEEEEEEEC
T ss_pred cEEEECCC-----ch--hHHHHHHHhcCCCEEEEEe
Confidence 99984322 21 2356789999999998763
No 334
>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021}
Probab=93.94 E-value=0.37 Score=44.29 Aligned_cols=100 Identities=14% Similarity=0.149 Sum_probs=66.7
Q ss_pred hccCCCCCCeEEEEcCcc-CHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHhhhCCCCCCCeEEEEecCCCCC------
Q 018740 171 GYLKPVLGGNIIDASCGS-GLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLP------ 243 (351)
Q Consensus 171 ~~l~~~~~~~vLDiGcG~-G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~g~~~~~i~~~~~d~~~lp------ 243 (351)
...+..++.+||-+|+|. |.++..+++.. +.+|+++|.++.-++.+++. | .. ..+..+-.++.
T Consensus 183 ~~~~~~~g~~VlV~G~G~vG~~a~qla~~~-Ga~Vi~~~~~~~~~~~~~~l-----G---a~-~vi~~~~~~~~~~v~~~ 252 (363)
T 3uog_A 183 EKGHLRAGDRVVVQGTGGVALFGLQIAKAT-GAEVIVTSSSREKLDRAFAL-----G---AD-HGINRLEEDWVERVYAL 252 (363)
T ss_dssp TTTCCCTTCEEEEESSBHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHH-----T---CS-EEEETTTSCHHHHHHHH
T ss_pred HhcCCCCCCEEEEECCCHHHHHHHHHHHHc-CCEEEEEecCchhHHHHHHc-----C---CC-EEEcCCcccHHHHHHHH
Confidence 445667789999999875 77777777763 34999999999888888764 1 11 12221111110
Q ss_pred CCCCceeeEEeccccccCCChHHHHHHHHhcccCCcEEEEEeec
Q 018740 244 FASSSIDAVHAGAAIHCWSSPSTGVAEISRVLRPGGVFVGTTYI 287 (351)
Q Consensus 244 ~~~~~fD~V~~~~vl~h~~d~~~~l~~i~~~LkpgG~li~~~~~ 287 (351)
.....+|+|+-.-. ...+....+.|+|+|.+++....
T Consensus 253 ~~g~g~D~vid~~g-------~~~~~~~~~~l~~~G~iv~~G~~ 289 (363)
T 3uog_A 253 TGDRGADHILEIAG-------GAGLGQSLKAVAPDGRISVIGVL 289 (363)
T ss_dssp HTTCCEEEEEEETT-------SSCHHHHHHHEEEEEEEEEECCC
T ss_pred hCCCCceEEEECCC-------hHHHHHHHHHhhcCCEEEEEecC
Confidence 12336999986543 12367788899999999887543
No 335
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=93.85 E-value=1.6 Score=43.75 Aligned_cols=155 Identities=10% Similarity=0.198 Sum_probs=92.4
Q ss_pred CCCeEEEEcCccCHHHHHHHHhCC--------CCeEEEEeCCHHHHHHHHHHHhhhC------------CC---------
Q 018740 177 LGGNIIDASCGSGLFSRIFAKSGL--------FSLVVALDYSENMLKQCYEFVQQES------------NF--------- 227 (351)
Q Consensus 177 ~~~~vLDiGcG~G~~~~~l~~~~~--------~~~v~gvD~s~~~~~~a~~~~~~~~------------g~--------- 227 (351)
+...|+-+|||.=.....+....+ ...++=+|. |+.++.=++.+.... ..
T Consensus 107 ~~~qvV~LGaGlDtr~~Rl~~~~~~~~~~~~~~~~~~EvD~-p~v~~~K~~~l~~~~~l~~~~~~~~~~~~~~~~~~~~~ 185 (695)
T 2zwa_A 107 KKIVVVNLGCGYDPLPFQLLDTNNIQSQQYHDRVSFIDIDY-SDLLKIKIELIKTIPELSKIIGLSEDKDYVDDSNVDFL 185 (695)
T ss_dssp SEEEEEEETCTTCCHHHHHHCTTCGGGGGGSSSEEEEEEEC-HHHHHHHHHHHHHCHHHHHHTTCCSSCSSCSCTTCCCE
T ss_pred CCcEEEEcccccCcceeeeeccCcccccccCCCCEEEECcc-HHHHHHHHHHHHcChHHHHhhccccccccccccccccc
Confidence 356899999998877777765532 234555555 444444444443210 00
Q ss_pred CCCCeEEEEecCCCCC----------C-CCCceeeEEeccccccCCCh--HHHHHHHHhcccCCcEEEEEeeccCCCCCc
Q 018740 228 PKENFLLVRADISRLP----------F-ASSSIDAVHAGAAIHCWSSP--STGVAEISRVLRPGGVFVGTTYIVDGPFNL 294 (351)
Q Consensus 228 ~~~~i~~~~~d~~~lp----------~-~~~~fD~V~~~~vl~h~~d~--~~~l~~i~~~LkpgG~li~~~~~~~~~~~~ 294 (351)
...+..++.+|+.+.. + .....-++++-.+|.+++.. ..+|+.+.+ + |+|.+++.++.... ...
T Consensus 186 ~s~~y~~v~~Dl~~~~~~~~~l~~~g~~d~~~ptl~i~Egvl~Yl~~~~~~~ll~~~~~-~-~~~~~~~~e~~~~~-~~~ 262 (695)
T 2zwa_A 186 TTPKYLARPCDLNDSKMFSTLLNECQLYDPNVVKVFVAEVSLAYMKPERSDSIIEATSK-M-ENSHFIILEQLIPK-GPF 262 (695)
T ss_dssp ECSSEEEEECCTTCHHHHHHHHHHTTTTCTTEEEEEEEESSGGGSCHHHHHHHHHHHHT-S-SSEEEEEEEECCTT-CTT
T ss_pred cCCCeeEEeCcCCCcHHHHHHHhhccCCCCCCCEEEeeeeEEEEcCHHHHHHHHHHHhh-C-CCceEEEEEeecCC-CCC
Confidence 0147889999997741 2 33445677778888988643 477887775 4 67777665544221 122
Q ss_pred chHHHHHHHHHhh----ccCCccCCCHHHHHHHHHHCCCeEEEEE
Q 018740 295 IPFSRLLRQNMMQ----ISGSYTFLSEREIEDLCRACGLVDFKCT 335 (351)
Q Consensus 295 ~~~~~~~~~~~~~----~~~~~~~~s~~~l~~ll~~aGf~~v~~~ 335 (351)
.++.+.+...+.. ......+.+.++..+.+.++||..+...
T Consensus 263 d~f~~~m~~~~~~~g~~l~~~~~~~~~~~~~~~~~~~Gw~~v~~~ 307 (695)
T 2zwa_A 263 EPFSKQMLAHFKRNDSPLQSVLKYNTIESQVQRFNKLGFAYVNVG 307 (695)
T ss_dssp SHHHHHHHHHHHHTTCCCCGGGTCCSHHHHHHHHHHTTCCEEEEE
T ss_pred ChHHHHHHHHHHHcCCCCCccccCCCHHHHHHHHHHCCCCCccee
Confidence 3333333333322 2223356789999999999999876543
No 336
>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A*
Probab=93.83 E-value=0.26 Score=44.84 Aligned_cols=98 Identities=14% Similarity=0.140 Sum_probs=65.9
Q ss_pred hccCCCCCCeEEEEcCcc-CHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHhhhCCCCCCCeEEEEecCCCCCC-----
Q 018740 171 GYLKPVLGGNIIDASCGS-GLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLPF----- 244 (351)
Q Consensus 171 ~~l~~~~~~~vLDiGcG~-G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~g~~~~~i~~~~~d~~~lp~----- 244 (351)
...+..++.+||-+|+|. |.++..+++.. ..+|+++|.+++.++.+++. ... ..+ |..+..+
T Consensus 160 ~~~~~~~g~~VlV~GaG~vG~~a~qla~~~-Ga~Vi~~~~~~~~~~~~~~l--------Ga~-~~i--~~~~~~~~~~~~ 227 (340)
T 3s2e_A 160 KVTDTRPGQWVVISGIGGLGHVAVQYARAM-GLRVAAVDIDDAKLNLARRL--------GAE-VAV--NARDTDPAAWLQ 227 (340)
T ss_dssp HTTTCCTTSEEEEECCSTTHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHT--------TCS-EEE--ETTTSCHHHHHH
T ss_pred HHcCCCCCCEEEEECCCHHHHHHHHHHHHC-CCeEEEEeCCHHHHHHHHHc--------CCC-EEE--eCCCcCHHHHHH
Confidence 334566788999999975 88888888764 34999999999988888763 111 112 2221110
Q ss_pred -CCCceeeEEeccccccCCChHHHHHHHHhcccCCcEEEEEee
Q 018740 245 -ASSSIDAVHAGAAIHCWSSPSTGVAEISRVLRPGGVFVGTTY 286 (351)
Q Consensus 245 -~~~~fD~V~~~~vl~h~~d~~~~l~~i~~~LkpgG~li~~~~ 286 (351)
..+.+|+|+.... -...++.+.+.|+|+|.+++...
T Consensus 228 ~~~g~~d~vid~~g------~~~~~~~~~~~l~~~G~iv~~G~ 264 (340)
T 3s2e_A 228 KEIGGAHGVLVTAV------SPKAFSQAIGMVRRGGTIALNGL 264 (340)
T ss_dssp HHHSSEEEEEESSC------CHHHHHHHHHHEEEEEEEEECSC
T ss_pred HhCCCCCEEEEeCC------CHHHHHHHHHHhccCCEEEEeCC
Confidence 1136888875322 23468889999999999987543
No 337
>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima}
Probab=93.76 E-value=0.36 Score=45.10 Aligned_cols=99 Identities=14% Similarity=0.061 Sum_probs=63.9
Q ss_pred CCCCCCeEEEEcCcc-CHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHhhhCCCCCCCeEEEEecCCCCC------CCC
Q 018740 174 KPVLGGNIIDASCGS-GLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLP------FAS 246 (351)
Q Consensus 174 ~~~~~~~vLDiGcG~-G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~g~~~~~i~~~~~d~~~lp------~~~ 246 (351)
+..++.+||=+|+|. |.++..+++.....+|+++|.++.-++.+++. | .. ..+..+-.++. ...
T Consensus 210 ~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~~~~l-----G--a~--~vi~~~~~~~~~~i~~~t~g 280 (404)
T 3ip1_A 210 GIRPGDNVVILGGGPIGLAAVAILKHAGASKVILSEPSEVRRNLAKEL-----G--AD--HVIDPTKENFVEAVLDYTNG 280 (404)
T ss_dssp CCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCHHHHHHHHHH-----T--CS--EEECTTTSCHHHHHHHHTTT
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHc-----C--CC--EEEcCCCCCHHHHHHHHhCC
Confidence 456788999999875 77778887765323899999999998888764 1 11 11211111110 123
Q ss_pred CceeeEEeccccccCCChHHHHHHHHhcc----cCCcEEEEEee
Q 018740 247 SSIDAVHAGAAIHCWSSPSTGVAEISRVL----RPGGVFVGTTY 286 (351)
Q Consensus 247 ~~fD~V~~~~vl~h~~d~~~~l~~i~~~L----kpgG~li~~~~ 286 (351)
..+|+|+ +....+...+..+.+.| +++|.+++...
T Consensus 281 ~g~D~vi-----d~~g~~~~~~~~~~~~l~~~~~~~G~iv~~G~ 319 (404)
T 3ip1_A 281 LGAKLFL-----EATGVPQLVWPQIEEVIWRARGINATVAIVAR 319 (404)
T ss_dssp CCCSEEE-----ECSSCHHHHHHHHHHHHHHCSCCCCEEEECSC
T ss_pred CCCCEEE-----ECCCCcHHHHHHHHHHHHhccCCCcEEEEeCC
Confidence 3699998 34445544556666666 99999988654
No 338
>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A
Probab=93.46 E-value=0.29 Score=44.84 Aligned_cols=100 Identities=17% Similarity=0.197 Sum_probs=65.0
Q ss_pred ccCCCCCCeEEEEcCcc-CHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHhhhCCCCCCCeEEEEec---CCC----CC
Q 018740 172 YLKPVLGGNIIDASCGS-GLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRAD---ISR----LP 243 (351)
Q Consensus 172 ~l~~~~~~~vLDiGcG~-G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~g~~~~~i~~~~~d---~~~----lp 243 (351)
..+..++.+||-+|+|. |.++..+++.....+|+++|.++.-++.+++. | .. ..+..+ ..+ +.
T Consensus 166 ~~~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~l-----G--a~--~vi~~~~~~~~~~~~~i~ 236 (356)
T 1pl8_A 166 RGGVTLGHKVLVCGAGPIGMVTLLVAKAMGAAQVVVTDLSATRLSKAKEI-----G--AD--LVLQISKESPQEIARKVE 236 (356)
T ss_dssp HHTCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHT-----T--CS--EEEECSSCCHHHHHHHHH
T ss_pred hcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHh-----C--CC--EEEcCcccccchHHHHHH
Confidence 34566788999999875 88888888764223899999999888888753 1 11 122211 001 10
Q ss_pred -CCCCceeeEEeccccccCCChHHHHHHHHhcccCCcEEEEEee
Q 018740 244 -FASSSIDAVHAGAAIHCWSSPSTGVAEISRVLRPGGVFVGTTY 286 (351)
Q Consensus 244 -~~~~~fD~V~~~~vl~h~~d~~~~l~~i~~~LkpgG~li~~~~ 286 (351)
.....+|+|+-.- .. ...+....+.|+|+|.++....
T Consensus 237 ~~~~~g~D~vid~~-----g~-~~~~~~~~~~l~~~G~iv~~G~ 274 (356)
T 1pl8_A 237 GQLGCKPEVTIECT-----GA-EASIQAGIYATRSGGTLVLVGL 274 (356)
T ss_dssp HHHTSCCSEEEECS-----CC-HHHHHHHHHHSCTTCEEEECSC
T ss_pred HHhCCCCCEEEECC-----CC-hHHHHHHHHHhcCCCEEEEEec
Confidence 0014699998432 22 2457888899999999987653
No 339
>3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A
Probab=93.36 E-value=0.28 Score=44.85 Aligned_cols=101 Identities=15% Similarity=0.184 Sum_probs=66.4
Q ss_pred hccCCCCCCeEEEEcCcc-CHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHhhhCCCCCCCeEEEEecCCCCC------
Q 018740 171 GYLKPVLGGNIIDASCGS-GLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLP------ 243 (351)
Q Consensus 171 ~~l~~~~~~~vLDiGcG~-G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~g~~~~~i~~~~~d~~~lp------ 243 (351)
...+..++.+||-+|+|. |.++..+++.....+|+++|.++..++.+++. | .. .++..+-.++.
T Consensus 160 ~~~~~~~g~~VlV~GaG~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~~l-----G---a~-~vi~~~~~~~~~~v~~~ 230 (352)
T 3fpc_A 160 ELANIKLGDTVCVIGIGPVGLMSVAGANHLGAGRIFAVGSRKHCCDIALEY-----G---AT-DIINYKNGDIVEQILKA 230 (352)
T ss_dssp HHTTCCTTCCEEEECCSHHHHHHHHHHHTTTCSSEEEECCCHHHHHHHHHH-----T---CC-EEECGGGSCHHHHHHHH
T ss_pred HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHh-----C---Cc-eEEcCCCcCHHHHHHHH
Confidence 445667789999999876 77888888764223799999999888888774 1 11 12211111110
Q ss_pred CCCCceeeEEeccccccCCChHHHHHHHHhcccCCcEEEEEee
Q 018740 244 FASSSIDAVHAGAAIHCWSSPSTGVAEISRVLRPGGVFVGTTY 286 (351)
Q Consensus 244 ~~~~~fD~V~~~~vl~h~~d~~~~l~~i~~~LkpgG~li~~~~ 286 (351)
.....+|+|+-.-. .+ ..++...+.|+|+|.++....
T Consensus 231 t~g~g~D~v~d~~g-----~~-~~~~~~~~~l~~~G~~v~~G~ 267 (352)
T 3fpc_A 231 TDGKGVDKVVIAGG-----DV-HTFAQAVKMIKPGSDIGNVNY 267 (352)
T ss_dssp TTTCCEEEEEECSS-----CT-THHHHHHHHEEEEEEEEECCC
T ss_pred cCCCCCCEEEECCC-----Ch-HHHHHHHHHHhcCCEEEEecc
Confidence 12336999985322 22 357888999999999987643
No 340
>3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana}
Probab=93.35 E-value=0.38 Score=44.46 Aligned_cols=103 Identities=16% Similarity=0.115 Sum_probs=66.4
Q ss_pred HHhccCCCCCCeEEEEcCcc-CHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHhhhCCCCCCCeEEEEec--CCCC---
Q 018740 169 MKGYLKPVLGGNIIDASCGS-GLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRAD--ISRL--- 242 (351)
Q Consensus 169 l~~~l~~~~~~~vLDiGcG~-G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~g~~~~~i~~~~~d--~~~l--- 242 (351)
+.......++.+||-+|+|. |.++..+++.....+|+++|.++.-++.+++. | .. ..+... -.++
T Consensus 185 l~~~~~~~~g~~VlV~GaG~vG~~a~q~a~~~Ga~~Vi~~~~~~~~~~~a~~l-----G--a~--~vi~~~~~~~~~~~~ 255 (378)
T 3uko_A 185 VWNTAKVEPGSNVAIFGLGTVGLAVAEGAKTAGASRIIGIDIDSKKYETAKKF-----G--VN--EFVNPKDHDKPIQEV 255 (378)
T ss_dssp HHTTTCCCTTCCEEEECCSHHHHHHHHHHHHHTCSCEEEECSCTTHHHHHHTT-----T--CC--EEECGGGCSSCHHHH
T ss_pred HHhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHc-----C--Cc--EEEccccCchhHHHH
Confidence 33445667788999999975 77887777764223799999999988888752 1 11 122111 1111
Q ss_pred --CCCCCceeeEEeccccccCCChHHHHHHHHhcccCC-cEEEEEee
Q 018740 243 --PFASSSIDAVHAGAAIHCWSSPSTGVAEISRVLRPG-GVFVGTTY 286 (351)
Q Consensus 243 --p~~~~~fD~V~~~~vl~h~~d~~~~l~~i~~~Lkpg-G~li~~~~ 286 (351)
....+.+|+|+-. ...+ ..++...+.|++| |++++...
T Consensus 256 i~~~~~gg~D~vid~-----~g~~-~~~~~~~~~l~~g~G~iv~~G~ 296 (378)
T 3uko_A 256 IVDLTDGGVDYSFEC-----IGNV-SVMRAALECCHKGWGTSVIVGV 296 (378)
T ss_dssp HHHHTTSCBSEEEEC-----SCCH-HHHHHHHHTBCTTTCEEEECSC
T ss_pred HHHhcCCCCCEEEEC-----CCCH-HHHHHHHHHhhccCCEEEEEcc
Confidence 0123479999843 2233 4578889999997 99887654
No 341
>1dl6_A Transcription factor II B (TFIIB); zinc ribbon, gene regulation; NMR {Homo sapiens} SCOP: g.41.3.1 PDB: 1rly_A 1ro4_A
Probab=93.32 E-value=0.058 Score=35.68 Aligned_cols=34 Identities=15% Similarity=0.216 Sum_probs=24.3
Q ss_pred cCCCceeCCCCCC-CcccccCCCcccccccCCcccccccccccc
Q 018740 67 TSKNVLACPICYK-PLTWIGDSSLSIESAAGSSLQCNTCKKTYS 109 (351)
Q Consensus 67 ~~~~~l~CP~C~~-~l~~~~~~~~~~~~~~~~~~~C~~C~~~~~ 109 (351)
..+..+.||.|++ .+..+ ...+.+.|..||.++.
T Consensus 7 ~ll~~~~Cp~C~~~~lv~D---------~~~ge~vC~~CGlVl~ 41 (58)
T 1dl6_A 7 DALPRVTCPNHPDAILVED---------YRAGDMICPECGLVVG 41 (58)
T ss_dssp CCCSCCSBTTBSSSCCEEC---------SSSCCEECTTTCCEEC
T ss_pred hccccccCcCCCCCceeEe---------CCCCeEEeCCCCCEEe
Confidence 3456678999998 44332 3457899999998764
No 342
>4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A*
Probab=93.30 E-value=0.21 Score=45.27 Aligned_cols=100 Identities=11% Similarity=0.010 Sum_probs=65.1
Q ss_pred HHhccCCCCCCeEEEEcC--ccCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHhhhCCCCCCCeEEEEecCCCCC---
Q 018740 169 MKGYLKPVLGGNIIDASC--GSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLP--- 243 (351)
Q Consensus 169 l~~~l~~~~~~~vLDiGc--G~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~g~~~~~i~~~~~d~~~lp--- 243 (351)
+....+..++.+||-+|+ |.|..+..+++.. ..+|+++|.+++-++.+.+.+ ... ..+ |..+..
T Consensus 141 l~~~~~~~~g~~vlI~Ga~g~iG~~~~~~a~~~-Ga~Vi~~~~~~~~~~~~~~~~-------g~~-~~~--~~~~~~~~~ 209 (336)
T 4b7c_A 141 LLDVGQPKNGETVVISGAAGAVGSVAGQIARLK-GCRVVGIAGGAEKCRFLVEEL-------GFD-GAI--DYKNEDLAA 209 (336)
T ss_dssp HHHTTCCCTTCEEEESSTTSHHHHHHHHHHHHT-TCEEEEEESSHHHHHHHHHTT-------CCS-EEE--ETTTSCHHH
T ss_pred HHHhcCCCCCCEEEEECCCCHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHc-------CCC-EEE--ECCCHHHHH
Confidence 335556777899999998 4577777776653 349999999998887773321 111 112 222111
Q ss_pred ----CCCCceeeEEeccccccCCChHHHHHHHHhcccCCcEEEEEee
Q 018740 244 ----FASSSIDAVHAGAAIHCWSSPSTGVAEISRVLRPGGVFVGTTY 286 (351)
Q Consensus 244 ----~~~~~fD~V~~~~vl~h~~d~~~~l~~i~~~LkpgG~li~~~~ 286 (351)
...+.+|+|+.+-. ...+....+.|+++|.+++...
T Consensus 210 ~~~~~~~~~~d~vi~~~g-------~~~~~~~~~~l~~~G~iv~~G~ 249 (336)
T 4b7c_A 210 GLKRECPKGIDVFFDNVG-------GEILDTVLTRIAFKARIVLCGA 249 (336)
T ss_dssp HHHHHCTTCEEEEEESSC-------HHHHHHHHTTEEEEEEEEECCC
T ss_pred HHHHhcCCCceEEEECCC-------cchHHHHHHHHhhCCEEEEEee
Confidence 11346999985433 1368889999999999987644
No 343
>1zkd_A DUF185; NESG, RPR58, structural genomics, PSI, protein structure INI northeast structural genomics consortium, unknown function; 2.10A {Rhodopseudomonas palustris} SCOP: c.66.1.52
Probab=93.13 E-value=0.48 Score=44.03 Aligned_cols=76 Identities=9% Similarity=0.024 Sum_probs=49.4
Q ss_pred CCeEEEEcCccCHHHHHHHHhC-------CCCeEEEEeCCHHHHHHHHHHHhhhCCCCCCCeEEEEecCCCCCCCCCcee
Q 018740 178 GGNIIDASCGSGLFSRIFAKSG-------LFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLPFASSSID 250 (351)
Q Consensus 178 ~~~vLDiGcG~G~~~~~l~~~~-------~~~~v~gvD~s~~~~~~a~~~~~~~~g~~~~~i~~~~~d~~~lp~~~~~fD 250 (351)
.-.|+|+|.|.|.+...+.+.. ...+++.||+|+...+.-++.+... .++.+. .++.++|. + .-
T Consensus 81 ~~~ivElGaG~GtLa~diL~~l~~~p~~~~~~~y~iVE~Sp~Lr~~Q~~~L~~~-----~~v~W~-~~l~~lp~--~-~~ 151 (387)
T 1zkd_A 81 TLRLIEIGPGRGTMMADALRALRVLPILYQSLSVHLVEINPVLRQKQQTLLAGI-----RNIHWH-DSFEDVPE--G-PA 151 (387)
T ss_dssp SEEEEEECCTTSHHHHHHHHHHTTSHHHHTTEEEEEECCCHHHHHHHHHHSTTC-----SSEEEE-SSGGGSCC--S-SE
T ss_pred CcEEEEECCCcchHHHHHHHHHHhCCccccccEEEEEecCHHHHHHHHHHhcCC-----CCeEEe-CChhhcCC--C-Ce
Confidence 4479999999999987776531 2348999999998887666655432 256544 34455541 2 34
Q ss_pred eEEeccccccCC
Q 018740 251 AVHAGAAIHCWS 262 (351)
Q Consensus 251 ~V~~~~vl~h~~ 262 (351)
+|+++.+|.-+|
T Consensus 152 ~viANE~fDAlP 163 (387)
T 1zkd_A 152 VILANEYFDVLP 163 (387)
T ss_dssp EEEEESSGGGSC
T ss_pred EEEeccccccCc
Confidence 666666665543
No 344
>3q87_A Putative uncharacterized protein ECU08_1170; SAM-methyltransferase, methyltransferase, methylation, trans activator-transferase complex; HET: SAM; 2.00A {Encephalitozoon cuniculi}
Probab=93.11 E-value=0.022 Score=43.85 Aligned_cols=27 Identities=22% Similarity=0.479 Sum_probs=24.1
Q ss_pred ccCCccccccccccccccCceeeeccc
Q 018740 94 AAGSSLQCNTCKKTYSGVGTHFDMTAA 120 (351)
Q Consensus 94 ~~~~~~~C~~C~~~~~~~~g~~~~~~~ 120 (351)
+..+.+.|++||+.|++.+|+++.+..
T Consensus 95 V~EG~L~Cp~cgr~ypI~~GIPNm~~~ 121 (125)
T 3q87_A 95 VVEGSLRCDMCGLIYPIKGSIVETVDT 121 (125)
T ss_dssp EEEEEEEETTTCCEEEEETTEEECSSC
T ss_pred EEEEEEECCCCCCEeeccCCcccHHHh
Confidence 567899999999999999999998654
No 345
>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1
Probab=92.92 E-value=0.84 Score=41.59 Aligned_cols=99 Identities=16% Similarity=0.141 Sum_probs=64.1
Q ss_pred ccCCCCCCeEEEEcCcc-CHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHhhhCCCCCCCeEEEEecC-CCCC------
Q 018740 172 YLKPVLGGNIIDASCGS-GLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADI-SRLP------ 243 (351)
Q Consensus 172 ~l~~~~~~~vLDiGcG~-G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~g~~~~~i~~~~~d~-~~lp------ 243 (351)
..+..++.+||-+|+|. |.++..+++.. ..+|+++|.+++.++.+++. | .. ..+..+- .++.
T Consensus 163 ~~~~~~g~~VlV~GaG~vG~~a~qla~~~-Ga~Vi~~~~~~~~~~~~~~l-----G--a~--~~~~~~~~~~~~~~i~~~ 232 (352)
T 1e3j_A 163 RAGVQLGTTVLVIGAGPIGLVSVLAAKAY-GAFVVCTARSPRRLEVAKNC-----G--AD--VTLVVDPAKEEESSIIER 232 (352)
T ss_dssp HHTCCTTCEEEEECCSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHT-----T--CS--EEEECCTTTSCHHHHHHH
T ss_pred hcCCCCCCEEEEECCCHHHHHHHHHHHHc-CCEEEEEcCCHHHHHHHHHh-----C--CC--EEEcCcccccHHHHHHHH
Confidence 34566788999999875 77777777753 34799999999988888753 1 11 1222110 1110
Q ss_pred CC---CCceeeEEeccccccCCChHHHHHHHHhcccCCcEEEEEee
Q 018740 244 FA---SSSIDAVHAGAAIHCWSSPSTGVAEISRVLRPGGVFVGTTY 286 (351)
Q Consensus 244 ~~---~~~fD~V~~~~vl~h~~d~~~~l~~i~~~LkpgG~li~~~~ 286 (351)
.. ...+|+|+..-. . ...++...+.|+++|.++....
T Consensus 233 ~~~~~g~g~D~vid~~g-----~-~~~~~~~~~~l~~~G~iv~~G~ 272 (352)
T 1e3j_A 233 IRSAIGDLPNVTIDCSG-----N-EKCITIGINITRTGGTLMLVGM 272 (352)
T ss_dssp HHHHSSSCCSEEEECSC-----C-HHHHHHHHHHSCTTCEEEECSC
T ss_pred hccccCCCCCEEEECCC-----C-HHHHHHHHHHHhcCCEEEEEec
Confidence 01 246999984332 2 2357888899999999987643
No 346
>3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa}
Probab=92.87 E-value=1.1 Score=40.98 Aligned_cols=103 Identities=17% Similarity=0.164 Sum_probs=66.9
Q ss_pred hccCCCCCCeEEEEcCcc-CHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHhhhCCCCCCCeEEEEe-----cCC-CC-
Q 018740 171 GYLKPVLGGNIIDASCGS-GLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRA-----DIS-RL- 242 (351)
Q Consensus 171 ~~l~~~~~~~vLDiGcG~-G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~g~~~~~i~~~~~-----d~~-~l- 242 (351)
...+..++.+||-+|+|. |.++..+++......|+++|.+++-++.+++. ... -+.+... |+. .+
T Consensus 173 ~~~~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~l-~~~------~~~~~~~~~~~~~~~~~v~ 245 (363)
T 3m6i_A 173 QRAGVRLGDPVLICGAGPIGLITMLCAKAAGACPLVITDIDEGRLKFAKEI-CPE------VVTHKVERLSAEESAKKIV 245 (363)
T ss_dssp HHHTCCTTCCEEEECCSHHHHHHHHHHHHTTCCSEEEEESCHHHHHHHHHH-CTT------CEEEECCSCCHHHHHHHHH
T ss_pred HHcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHh-chh------cccccccccchHHHHHHHH
Confidence 344566788999999875 77888888764222499999999999999875 211 1222211 110 00
Q ss_pred -CCCCCceeeEEeccccccCCChHHHHHHHHhcccCCcEEEEEee
Q 018740 243 -PFASSSIDAVHAGAAIHCWSSPSTGVAEISRVLRPGGVFVGTTY 286 (351)
Q Consensus 243 -p~~~~~fD~V~~~~vl~h~~d~~~~l~~i~~~LkpgG~li~~~~ 286 (351)
-.....+|+|+-.- .. ...+....+.|+++|.+++...
T Consensus 246 ~~t~g~g~Dvvid~~-----g~-~~~~~~~~~~l~~~G~iv~~G~ 284 (363)
T 3m6i_A 246 ESFGGIEPAVALECT-----GV-ESSIAAAIWAVKFGGKVFVIGV 284 (363)
T ss_dssp HHTSSCCCSEEEECS-----CC-HHHHHHHHHHSCTTCEEEECCC
T ss_pred HHhCCCCCCEEEECC-----CC-hHHHHHHHHHhcCCCEEEEEcc
Confidence 01234699998532 22 2357888999999999988654
No 347
>4dvj_A Putative zinc-dependent alcohol dehydrogenase Pro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.99A {Rhizobium etli}
Probab=92.84 E-value=0.63 Score=42.77 Aligned_cols=91 Identities=18% Similarity=0.185 Sum_probs=61.4
Q ss_pred CCCeEEEEc-Cc-cCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHhhhCCCCCCCeEEEEecCCC-C-----CCCCCc
Q 018740 177 LGGNIIDAS-CG-SGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISR-L-----PFASSS 248 (351)
Q Consensus 177 ~~~~vLDiG-cG-~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~g~~~~~i~~~~~d~~~-l-----p~~~~~ 248 (351)
++.+||-+| +| .|.++..+++.....+|+++|.+++-++.+++. | .+ .++ |..+ + ....+.
T Consensus 171 ~g~~VlV~Ga~G~vG~~a~qlak~~~g~~Vi~~~~~~~~~~~~~~l-----G--ad--~vi--~~~~~~~~~v~~~~~~g 239 (363)
T 4dvj_A 171 AAPAILIVGGAGGVGSIAVQIARQRTDLTVIATASRPETQEWVKSL-----G--AH--HVI--DHSKPLAAEVAALGLGA 239 (363)
T ss_dssp SEEEEEEESTTSHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHHHT-----T--CS--EEE--CTTSCHHHHHHTTCSCC
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHHHHc-----C--CC--EEE--eCCCCHHHHHHHhcCCC
Confidence 678999998 55 488888888862245999999999888888763 1 11 111 1111 1 112357
Q ss_pred eeeEEeccccccCCChHHHHHHHHhcccCCcEEEEE
Q 018740 249 IDAVHAGAAIHCWSSPSTGVAEISRVLRPGGVFVGT 284 (351)
Q Consensus 249 fD~V~~~~vl~h~~d~~~~l~~i~~~LkpgG~li~~ 284 (351)
+|+|+-+-. -...++.+.+.|+++|.+++.
T Consensus 240 ~Dvvid~~g------~~~~~~~~~~~l~~~G~iv~~ 269 (363)
T 4dvj_A 240 PAFVFSTTH------TDKHAAEIADLIAPQGRFCLI 269 (363)
T ss_dssp EEEEEECSC------HHHHHHHHHHHSCTTCEEEEC
T ss_pred ceEEEECCC------chhhHHHHHHHhcCCCEEEEE
Confidence 999884322 234678889999999999876
No 348
>2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A*
Probab=92.81 E-value=0.39 Score=43.67 Aligned_cols=98 Identities=12% Similarity=0.014 Sum_probs=64.0
Q ss_pred hccCCCCCCeEEEEcC--ccCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHhhhCCCCCCCeEEEEecCCC---CC--
Q 018740 171 GYLKPVLGGNIIDASC--GSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISR---LP-- 243 (351)
Q Consensus 171 ~~l~~~~~~~vLDiGc--G~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~g~~~~~i~~~~~d~~~---lp-- 243 (351)
...+..++.+||-+|+ |.|..+..+++.. +.+|+++|.++..++.+++.+ ... .. .|..+ +.
T Consensus 149 ~~~~~~~g~~vlI~Ga~g~iG~~~~~~a~~~-G~~V~~~~~~~~~~~~~~~~~-------g~~-~~--~d~~~~~~~~~~ 217 (345)
T 2j3h_A 149 EVCSPKEGETVYVSAASGAVGQLVGQLAKMM-GCYVVGSAGSKEKVDLLKTKF-------GFD-DA--FNYKEESDLTAA 217 (345)
T ss_dssp TTSCCCTTCEEEESSTTSHHHHHHHHHHHHT-TCEEEEEESSHHHHHHHHHTS-------CCS-EE--EETTSCSCSHHH
T ss_pred HHhCCCCCCEEEEECCCcHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHc-------CCc-eE--EecCCHHHHHHH
Confidence 4456667899999997 4577777776653 249999999998887776421 111 11 13221 10
Q ss_pred ---CCCCceeeEEeccccccCCChHHHHHHHHhcccCCcEEEEEee
Q 018740 244 ---FASSSIDAVHAGAAIHCWSSPSTGVAEISRVLRPGGVFVGTTY 286 (351)
Q Consensus 244 ---~~~~~fD~V~~~~vl~h~~d~~~~l~~i~~~LkpgG~li~~~~ 286 (351)
...+.+|+|+.+.. . ..++...+.|+++|.+++...
T Consensus 218 ~~~~~~~~~d~vi~~~g-----~--~~~~~~~~~l~~~G~~v~~G~ 256 (345)
T 2j3h_A 218 LKRCFPNGIDIYFENVG-----G--KMLDAVLVNMNMHGRIAVCGM 256 (345)
T ss_dssp HHHHCTTCEEEEEESSC-----H--HHHHHHHTTEEEEEEEEECCC
T ss_pred HHHHhCCCCcEEEECCC-----H--HHHHHHHHHHhcCCEEEEEcc
Confidence 11246999986543 1 368888999999999987643
No 349
>2c7p_A Modification methylase HHAI; DNA methyltransferase, methyltransferase, base flipping, restriction system, transferase; HET: 5CM A1P SAH EPE CIT; 1.7A {Haemophilus haemolyticus} SCOP: c.66.1.26 PDB: 10mh_A* 1m0e_A* 1mht_A* 1hmy_A* 1skm_A* 2c7o_A* 2c7q_A* 2hmy_B* 2hr1_A* 3eeo_A* 3mht_A* 4mht_A* 5mht_A* 6mht_A* 7mht_A* 8mht_A* 9mht_A* 2zcj_A* 2z6u_A* 2z6q_A* ...
Probab=92.61 E-value=0.31 Score=44.32 Aligned_cols=68 Identities=19% Similarity=0.202 Sum_probs=51.9
Q ss_pred CCeEEEEcCccCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHhhhCCCCCCCeEEEEecCCCCCCC-CCceeeEEecc
Q 018740 178 GGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLPFA-SSSIDAVHAGA 256 (351)
Q Consensus 178 ~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~g~~~~~i~~~~~d~~~lp~~-~~~fD~V~~~~ 256 (351)
+.+++|+.||.|.+...+...|. ..+.++|+++.+++..+.+.... . .+|+.++... -..+|+|+...
T Consensus 11 ~~~~~dLFaG~Gg~~~g~~~aG~-~~v~~~e~d~~a~~t~~~N~~~~-----~-----~~Di~~~~~~~~~~~D~l~~gp 79 (327)
T 2c7p_A 11 GLRFIDLFAGLGGFRLALESCGA-ECVYSNEWDKYAQEVYEMNFGEK-----P-----EGDITQVNEKTIPDHDILCAGF 79 (327)
T ss_dssp TCEEEEETCTTTHHHHHHHHTTC-EEEEEECCCHHHHHHHHHHHSCC-----C-----BSCGGGSCGGGSCCCSEEEEEC
T ss_pred CCcEEEECCCcCHHHHHHHHCCC-eEEEEEeCCHHHHHHHHHHcCCC-----C-----cCCHHHcCHhhCCCCCEEEECC
Confidence 46899999999999999999885 35788999999999988875432 1 5777665321 13589999764
No 350
>1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A*
Probab=92.61 E-value=0.65 Score=42.75 Aligned_cols=101 Identities=13% Similarity=0.076 Sum_probs=64.8
Q ss_pred hccCCCCCCeEEEEcCcc-CHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHhhhCCCCCCCeEEEEecC--CCC-----
Q 018740 171 GYLKPVLGGNIIDASCGS-GLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADI--SRL----- 242 (351)
Q Consensus 171 ~~l~~~~~~~vLDiGcG~-G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~g~~~~~i~~~~~d~--~~l----- 242 (351)
...+..++.+||-+|+|. |.++..+++.....+|+++|.++.-++.+++. | .. ..+..+- .++
T Consensus 185 ~~~~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~l-----G--a~--~vi~~~~~~~~~~~~i~ 255 (373)
T 1p0f_A 185 NTAKVTPGSTCAVFGLGGVGFSAIVGCKAAGASRIIGVGTHKDKFPKAIEL-----G--AT--ECLNPKDYDKPIYEVIC 255 (373)
T ss_dssp TTTCCCTTCEEEEECCSHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHHHT-----T--CS--EEECGGGCSSCHHHHHH
T ss_pred hccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHHHc-----C--Cc--EEEecccccchHHHHHH
Confidence 445566788999999875 77777777763223799999999888888753 1 11 1121110 111
Q ss_pred CCCCCceeeEEeccccccCCChHHHHHHHHhcccCC-cEEEEEee
Q 018740 243 PFASSSIDAVHAGAAIHCWSSPSTGVAEISRVLRPG-GVFVGTTY 286 (351)
Q Consensus 243 p~~~~~fD~V~~~~vl~h~~d~~~~l~~i~~~Lkpg-G~li~~~~ 286 (351)
....+.+|+|+-.- .. ...++...+.|+++ |.+++...
T Consensus 256 ~~t~gg~Dvvid~~-----g~-~~~~~~~~~~l~~~~G~iv~~G~ 294 (373)
T 1p0f_A 256 EKTNGGVDYAVECA-----GR-IETMMNALQSTYCGSGVTVVLGL 294 (373)
T ss_dssp HHTTSCBSEEEECS-----CC-HHHHHHHHHTBCTTTCEEEECCC
T ss_pred HHhCCCCCEEEECC-----CC-HHHHHHHHHHHhcCCCEEEEEcc
Confidence 01123699998432 22 34578889999999 99887543
No 351
>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis}
Probab=92.58 E-value=0.36 Score=43.85 Aligned_cols=102 Identities=15% Similarity=0.197 Sum_probs=64.0
Q ss_pred HHhccCCCCCCeEEEEcCc--cCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHhhhCCCCCCCeEEEEecCCCCC---
Q 018740 169 MKGYLKPVLGGNIIDASCG--SGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLP--- 243 (351)
Q Consensus 169 l~~~l~~~~~~~vLDiGcG--~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~g~~~~~i~~~~~d~~~lp--- 243 (351)
+.......++.+||-+|+| .|..+..+++.. +.+|+++|.++..++.+++. .... .+...-.++.
T Consensus 136 ~~~~~~~~~g~~VlV~Ga~g~iG~~~~~~a~~~-Ga~Vi~~~~~~~~~~~~~~l--------ga~~-~~~~~~~~~~~~~ 205 (340)
T 3gms_A 136 CTETLNLQRNDVLLVNACGSAIGHLFAQLSQIL-NFRLIAVTRNNKHTEELLRL--------GAAY-VIDTSTAPLYETV 205 (340)
T ss_dssp HHTTSCCCTTCEEEESSTTSHHHHHHHHHHHHH-TCEEEEEESSSTTHHHHHHH--------TCSE-EEETTTSCHHHHH
T ss_pred HHHhcccCCCCEEEEeCCccHHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHhC--------CCcE-EEeCCcccHHHHH
Confidence 3345567788999999987 577777766642 23999999999888888764 1111 1211111110
Q ss_pred ---CCCCceeeEEeccccccCCChHHHHHHHHhcccCCcEEEEEeec
Q 018740 244 ---FASSSIDAVHAGAAIHCWSSPSTGVAEISRVLRPGGVFVGTTYI 287 (351)
Q Consensus 244 ---~~~~~fD~V~~~~vl~h~~d~~~~l~~i~~~LkpgG~li~~~~~ 287 (351)
.....+|+|+.+-.- + .+.+..+.|+++|.++.....
T Consensus 206 ~~~~~~~g~Dvvid~~g~-----~--~~~~~~~~l~~~G~iv~~G~~ 245 (340)
T 3gms_A 206 MELTNGIGADAAIDSIGG-----P--DGNELAFSLRPNGHFLTIGLL 245 (340)
T ss_dssp HHHTTTSCEEEEEESSCH-----H--HHHHHHHTEEEEEEEEECCCT
T ss_pred HHHhCCCCCcEEEECCCC-----h--hHHHHHHHhcCCCEEEEEeec
Confidence 123479999854331 1 234455899999999886543
No 352
>3j20_Y 30S ribosomal protein S27AE; archaea, archaeal, KINK-turn, protein synthe ribosome; 6.60A {Pyrococcus furiosus}
Probab=92.56 E-value=0.046 Score=34.92 Aligned_cols=30 Identities=23% Similarity=0.393 Sum_probs=21.4
Q ss_pred ceeCCCCCCCcccccCCCcccccccCCcccccccccccc
Q 018740 71 VLACPICYKPLTWIGDSSLSIESAAGSSLQCNTCKKTYS 109 (351)
Q Consensus 71 ~l~CP~C~~~l~~~~~~~~~~~~~~~~~~~C~~C~~~~~ 109 (351)
.--||.||+...... ....+.|+.||..+-
T Consensus 19 ~k~CP~CG~~~fm~~---------~~~R~~C~kCG~t~~ 48 (50)
T 3j20_Y 19 NKFCPRCGPGVFMAD---------HGDRWACGKCGYTEW 48 (50)
T ss_dssp SEECSSSCSSCEEEE---------CSSEEECSSSCCEEE
T ss_pred cccCCCCCCceEEec---------CCCeEECCCCCCEEE
Confidence 456999999755432 136889999997653
No 353
>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A*
Probab=92.56 E-value=0.66 Score=41.92 Aligned_cols=99 Identities=18% Similarity=0.190 Sum_probs=64.2
Q ss_pred hccCCCCCCeEEEEcC--ccCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHhhhCCCCCCCeEEEEecCCCCC-----
Q 018740 171 GYLKPVLGGNIIDASC--GSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLP----- 243 (351)
Q Consensus 171 ~~l~~~~~~~vLDiGc--G~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~g~~~~~i~~~~~d~~~lp----- 243 (351)
...+..++.+||-+|+ |.|..+..+++.. +.+|+++|.+++-++.+++. ... ..+..+-.++.
T Consensus 142 ~~~~~~~g~~vlV~Ga~g~iG~~~~~~a~~~-Ga~Vi~~~~~~~~~~~~~~~--------ga~-~~~~~~~~~~~~~~~~ 211 (334)
T 3qwb_A 142 EAYHVKKGDYVLLFAAAGGVGLILNQLLKMK-GAHTIAVASTDEKLKIAKEY--------GAE-YLINASKEDILRQVLK 211 (334)
T ss_dssp TTSCCCTTCEEEESSTTBHHHHHHHHHHHHT-TCEEEEEESSHHHHHHHHHT--------TCS-EEEETTTSCHHHHHHH
T ss_pred HhccCCCCCEEEEECCCCHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHc--------CCc-EEEeCCCchHHHHHHH
Confidence 3345677899999994 3477777777653 34999999999888877663 111 12221111110
Q ss_pred -CCCCceeeEEeccccccCCChHHHHHHHHhcccCCcEEEEEee
Q 018740 244 -FASSSIDAVHAGAAIHCWSSPSTGVAEISRVLRPGGVFVGTTY 286 (351)
Q Consensus 244 -~~~~~fD~V~~~~vl~h~~d~~~~l~~i~~~LkpgG~li~~~~ 286 (351)
.....+|+|+.+-.- ..++...+.|+++|.++....
T Consensus 212 ~~~~~g~D~vid~~g~-------~~~~~~~~~l~~~G~iv~~G~ 248 (334)
T 3qwb_A 212 FTNGKGVDASFDSVGK-------DTFEISLAALKRKGVFVSFGN 248 (334)
T ss_dssp HTTTSCEEEEEECCGG-------GGHHHHHHHEEEEEEEEECCC
T ss_pred HhCCCCceEEEECCCh-------HHHHHHHHHhccCCEEEEEcC
Confidence 113469999865432 347788899999999988643
No 354
>2qrv_A DNA (cytosine-5)-methyltransferase 3A; DNA methyltransferase 3A (DNMT3A) and ITS regulatory factor; HET: DNA SAH; 2.89A {Homo sapiens}
Probab=92.52 E-value=0.21 Score=44.69 Aligned_cols=71 Identities=11% Similarity=0.060 Sum_probs=54.5
Q ss_pred CCCeEEEEcCccCHHHHHHHHhCCCCe-EEEEeCCHHHHHHHHHHHhhhCCCCCCCeEEEEecCCCCCCC----CCceee
Q 018740 177 LGGNIIDASCGSGLFSRIFAKSGLFSL-VVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLPFA----SSSIDA 251 (351)
Q Consensus 177 ~~~~vLDiGcG~G~~~~~l~~~~~~~~-v~gvD~s~~~~~~a~~~~~~~~g~~~~~i~~~~~d~~~lp~~----~~~fD~ 251 (351)
...+++|+-||.|.+...+.+.|.... |.++|+++.+++..+.+ .+...++.+|+.++... .+.+|+
T Consensus 15 ~~~~vidLFaG~GG~~~g~~~aG~~~~~v~a~E~d~~a~~ty~~N--------~~~~~~~~~DI~~i~~~~i~~~~~~Dl 86 (295)
T 2qrv_A 15 KPIRVLSLFDGIATGLLVLKDLGIQVDRYIASEVCEDSITVGMVR--------HQGKIMYVGDVRSVTQKHIQEWGPFDL 86 (295)
T ss_dssp CCEEEEEETCTTTHHHHHHHHTTBCEEEEEEECCCHHHHHHHHHH--------TTTCEEEECCGGGCCHHHHHHTCCCSE
T ss_pred CCCEEEEeCcCccHHHHHHHHCCCccceEEEEECCHHHHHHHHHh--------CCCCceeCCChHHccHHHhcccCCcCE
Confidence 355899999999999999999886433 68999999988877665 34556788999876421 136899
Q ss_pred EEec
Q 018740 252 VHAG 255 (351)
Q Consensus 252 V~~~ 255 (351)
++..
T Consensus 87 l~gg 90 (295)
T 2qrv_A 87 VIGG 90 (295)
T ss_dssp EEEC
T ss_pred EEec
Confidence 9965
No 355
>1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1
Probab=92.48 E-value=0.84 Score=41.97 Aligned_cols=99 Identities=15% Similarity=0.140 Sum_probs=64.8
Q ss_pred hccCCCCCCeEEEEcCcc-CHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHhhhCCCCCCCeEEEEecCCC----CC--
Q 018740 171 GYLKPVLGGNIIDASCGS-GLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISR----LP-- 243 (351)
Q Consensus 171 ~~l~~~~~~~vLDiGcG~-G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~g~~~~~i~~~~~d~~~----lp-- 243 (351)
...+..++.+||-+|+|. |.++..+++.....+|+++|.++..++.+++. | .. ..+ |..+ +.
T Consensus 186 ~~~~~~~g~~VlV~GaG~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~~l-----G--a~--~vi--~~~~~~~~~~~~ 254 (374)
T 1cdo_A 186 NTAKVEPGSTCAVFGLGAVGLAAVMGCHSAGAKRIIAVDLNPDKFEKAKVF-----G--AT--DFV--NPNDHSEPISQV 254 (374)
T ss_dssp TTTCCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHT-----T--CC--EEE--CGGGCSSCHHHH
T ss_pred hccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHh-----C--Cc--eEE--eccccchhHHHH
Confidence 444566788999999875 77777787764223799999999988888753 1 11 112 2211 10
Q ss_pred ---CCCCceeeEEeccccccCCChHHHHHHHHhcccCC-cEEEEEee
Q 018740 244 ---FASSSIDAVHAGAAIHCWSSPSTGVAEISRVLRPG-GVFVGTTY 286 (351)
Q Consensus 244 ---~~~~~fD~V~~~~vl~h~~d~~~~l~~i~~~Lkpg-G~li~~~~ 286 (351)
...+.+|+|+-.-. . ...++...+.|+++ |.+++...
T Consensus 255 ~~~~~~~g~D~vid~~g-----~-~~~~~~~~~~l~~~~G~iv~~G~ 295 (374)
T 1cdo_A 255 LSKMTNGGVDFSLECVG-----N-VGVMRNALESCLKGWGVSVLVGW 295 (374)
T ss_dssp HHHHHTSCBSEEEECSC-----C-HHHHHHHHHTBCTTTCEEEECSC
T ss_pred HHHHhCCCCCEEEECCC-----C-HHHHHHHHHHhhcCCcEEEEEcC
Confidence 11236999984322 2 34578889999999 99887543
No 356
>2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ...
Probab=92.44 E-value=0.86 Score=41.93 Aligned_cols=101 Identities=13% Similarity=0.084 Sum_probs=64.6
Q ss_pred hccCCCCCCeEEEEcCcc-CHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHhhhCCCCCCCeEEEEecC--CCC-----
Q 018740 171 GYLKPVLGGNIIDASCGS-GLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADI--SRL----- 242 (351)
Q Consensus 171 ~~l~~~~~~~vLDiGcG~-G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~g~~~~~i~~~~~d~--~~l----- 242 (351)
...+..++.+||-+|+|. |.++..+++.....+|+++|.+++.++.+++. | .. ..+..+- .++
T Consensus 185 ~~~~~~~g~~VlV~GaG~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~~l-----G--a~--~vi~~~~~~~~~~~~~~ 255 (374)
T 2jhf_A 185 KVAKVTQGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKEV-----G--AT--ECVNPQDYKKPIQEVLT 255 (374)
T ss_dssp TTTCCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHT-----T--CS--EEECGGGCSSCHHHHHH
T ss_pred hccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHh-----C--Cc--eEecccccchhHHHHHH
Confidence 445566788999999875 77777777764223799999999888888653 1 11 1121110 111
Q ss_pred CCCCCceeeEEeccccccCCChHHHHHHHHhcccCC-cEEEEEee
Q 018740 243 PFASSSIDAVHAGAAIHCWSSPSTGVAEISRVLRPG-GVFVGTTY 286 (351)
Q Consensus 243 p~~~~~fD~V~~~~vl~h~~d~~~~l~~i~~~Lkpg-G~li~~~~ 286 (351)
....+.+|+|+-.- .. ...++...+.|+++ |.+++...
T Consensus 256 ~~~~~g~D~vid~~-----g~-~~~~~~~~~~l~~~~G~iv~~G~ 294 (374)
T 2jhf_A 256 EMSNGGVDFSFEVI-----GR-LDTMVTALSCCQEAYGVSVIVGV 294 (374)
T ss_dssp HHTTSCBSEEEECS-----CC-HHHHHHHHHHBCTTTCEEEECSC
T ss_pred HHhCCCCcEEEECC-----CC-HHHHHHHHHHhhcCCcEEEEecc
Confidence 01123699998432 22 24578889999999 99887543
No 357
>1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A*
Probab=92.26 E-value=0.89 Score=41.83 Aligned_cols=99 Identities=13% Similarity=0.073 Sum_probs=64.9
Q ss_pred hccCCCCCCeEEEEcCcc-CHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHhhhCCCCCCCeEEEEecCCC----CC--
Q 018740 171 GYLKPVLGGNIIDASCGS-GLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISR----LP-- 243 (351)
Q Consensus 171 ~~l~~~~~~~vLDiGcG~-G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~g~~~~~i~~~~~d~~~----lp-- 243 (351)
...+..++.+||-+|+|. |.++..+++.....+|+++|.+++-++.+++. | .. ..+ |..+ +.
T Consensus 189 ~~~~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~l-----G--a~--~vi--~~~~~~~~~~~~ 257 (376)
T 1e3i_A 189 NTAKVTPGSTCAVFGLGCVGLSAIIGCKIAGASRIIAIDINGEKFPKAKAL-----G--AT--DCL--NPRELDKPVQDV 257 (376)
T ss_dssp TTSCCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHT-----T--CS--EEE--CGGGCSSCHHHH
T ss_pred HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHh-----C--Cc--EEE--ccccccchHHHH
Confidence 445566788999999875 77888888764223799999999888888753 1 11 111 2211 10
Q ss_pred ---CCCCceeeEEeccccccCCChHHHHHHHHhcccCC-cEEEEEee
Q 018740 244 ---FASSSIDAVHAGAAIHCWSSPSTGVAEISRVLRPG-GVFVGTTY 286 (351)
Q Consensus 244 ---~~~~~fD~V~~~~vl~h~~d~~~~l~~i~~~Lkpg-G~li~~~~ 286 (351)
...+.+|+|+-. ... ...++...+.|+++ |.+++...
T Consensus 258 v~~~~~~g~Dvvid~-----~G~-~~~~~~~~~~l~~~~G~iv~~G~ 298 (376)
T 1e3i_A 258 ITELTAGGVDYSLDC-----AGT-AQTLKAAVDCTVLGWGSCTVVGA 298 (376)
T ss_dssp HHHHHTSCBSEEEES-----SCC-HHHHHHHHHTBCTTTCEEEECCC
T ss_pred HHHHhCCCccEEEEC-----CCC-HHHHHHHHHHhhcCCCEEEEECC
Confidence 112369999843 222 34578889999999 99887543
No 358
>2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A*
Probab=92.21 E-value=0.75 Score=42.26 Aligned_cols=101 Identities=15% Similarity=0.110 Sum_probs=64.7
Q ss_pred hccCCCCCCeEEEEcCcc-CHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHhhhCCCCCCCeEEEEecC--CCC-----
Q 018740 171 GYLKPVLGGNIIDASCGS-GLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADI--SRL----- 242 (351)
Q Consensus 171 ~~l~~~~~~~vLDiGcG~-G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~g~~~~~i~~~~~d~--~~l----- 242 (351)
...+..++.+||-+|+|. |.++..+++.....+|+++|.++..++.+++. | .. ..+..+- .++
T Consensus 184 ~~~~~~~g~~VlV~GaG~vG~~avqla~~~Ga~~Vi~~~~~~~~~~~~~~l-----G--a~--~vi~~~~~~~~~~~~v~ 254 (373)
T 2fzw_A 184 NTAKLEPGSVCAVFGLGGVGLAVIMGCKVAGASRIIGVDINKDKFARAKEF-----G--AT--ECINPQDFSKPIQEVLI 254 (373)
T ss_dssp TTTCCCTTCEEEEECCSHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHHHH-----T--CS--EEECGGGCSSCHHHHHH
T ss_pred hhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHc-----C--Cc--eEeccccccccHHHHHH
Confidence 445566788999999875 77777777763222799999999988888764 1 11 1121110 111
Q ss_pred CCCCCceeeEEeccccccCCChHHHHHHHHhcccCC-cEEEEEee
Q 018740 243 PFASSSIDAVHAGAAIHCWSSPSTGVAEISRVLRPG-GVFVGTTY 286 (351)
Q Consensus 243 p~~~~~fD~V~~~~vl~h~~d~~~~l~~i~~~Lkpg-G~li~~~~ 286 (351)
....+.+|+|+-.- .. ...++...+.|+++ |.+++...
T Consensus 255 ~~~~~g~D~vid~~-----g~-~~~~~~~~~~l~~~~G~iv~~G~ 293 (373)
T 2fzw_A 255 EMTDGGVDYSFECI-----GN-VKVMRAALEACHKGWGVSVVVGV 293 (373)
T ss_dssp HHTTSCBSEEEECS-----CC-HHHHHHHHHTBCTTTCEEEECSC
T ss_pred HHhCCCCCEEEECC-----Cc-HHHHHHHHHhhccCCcEEEEEec
Confidence 01123699998432 22 34578889999999 99887543
No 359
>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae}
Probab=92.11 E-value=0.36 Score=43.98 Aligned_cols=95 Identities=15% Similarity=0.148 Sum_probs=61.9
Q ss_pred CCCCCCeEEEEcC--ccCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHhhhCCCCCCCeEEEEecCC---CCC-----
Q 018740 174 KPVLGGNIIDASC--GSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADIS---RLP----- 243 (351)
Q Consensus 174 ~~~~~~~vLDiGc--G~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~g~~~~~i~~~~~d~~---~lp----- 243 (351)
+..++.+||-+|+ |.|..+..+++.. ..+|+++|.++..++.+++. ... .. .|.. ++.
T Consensus 166 ~~~~g~~vlV~Ga~ggiG~~~~~~a~~~-Ga~V~~~~~~~~~~~~~~~~--------g~~-~~--~d~~~~~~~~~~~~~ 233 (347)
T 2hcy_A 166 NLMAGHWVAISGAAGGLGSLAVQYAKAM-GYRVLGIDGGEGKEELFRSI--------GGE-VF--IDFTKEKDIVGAVLK 233 (347)
T ss_dssp TCCTTCEEEEETTTSHHHHHHHHHHHHT-TCEEEEEECSTTHHHHHHHT--------TCC-EE--EETTTCSCHHHHHHH
T ss_pred CCCCCCEEEEECCCchHHHHHHHHHHHC-CCcEEEEcCCHHHHHHHHHc--------CCc-eE--EecCccHhHHHHHHH
Confidence 5667889999998 4577666666642 23999999998877776652 111 11 2432 110
Q ss_pred CCCCceeeEEeccccccCCChHHHHHHHHhcccCCcEEEEEee
Q 018740 244 FASSSIDAVHAGAAIHCWSSPSTGVAEISRVLRPGGVFVGTTY 286 (351)
Q Consensus 244 ~~~~~fD~V~~~~vl~h~~d~~~~l~~i~~~LkpgG~li~~~~ 286 (351)
...+.+|+|+.+.. ....++.+.+.|+++|.++....
T Consensus 234 ~~~~~~D~vi~~~g------~~~~~~~~~~~l~~~G~iv~~g~ 270 (347)
T 2hcy_A 234 ATDGGAHGVINVSV------SEAAIEASTRYVRANGTTVLVGM 270 (347)
T ss_dssp HHTSCEEEEEECSS------CHHHHHHHTTSEEEEEEEEECCC
T ss_pred HhCCCCCEEEECCC------cHHHHHHHHHHHhcCCEEEEEeC
Confidence 01126999986543 13468889999999999887543
No 360
>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus}
Probab=92.10 E-value=0.42 Score=43.51 Aligned_cols=97 Identities=12% Similarity=0.079 Sum_probs=64.1
Q ss_pred hccCCCCCCeEEEEcC--ccCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHhhhCCCCCCCeEEEEecCCCCC-----
Q 018740 171 GYLKPVLGGNIIDASC--GSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLP----- 243 (351)
Q Consensus 171 ~~l~~~~~~~vLDiGc--G~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~g~~~~~i~~~~~d~~~lp----- 243 (351)
......++.+||-+|+ |.|..+..+++.. +.+|++++.+++-++.+++. ... ..+..+ .++.
T Consensus 153 ~~~~~~~g~~VlV~Gasg~iG~~~~~~a~~~-Ga~Vi~~~~~~~~~~~~~~~--------ga~-~v~~~~-~~~~~~v~~ 221 (342)
T 4eye_A 153 RRGQLRAGETVLVLGAAGGIGTAAIQIAKGM-GAKVIAVVNRTAATEFVKSV--------GAD-IVLPLE-EGWAKAVRE 221 (342)
T ss_dssp TTSCCCTTCEEEESSTTSHHHHHHHHHHHHT-TCEEEEEESSGGGHHHHHHH--------TCS-EEEESS-TTHHHHHHH
T ss_pred HhcCCCCCCEEEEECCCCHHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHhc--------CCc-EEecCc-hhHHHHHHH
Confidence 4456677899999997 4577777777763 34999999999888888764 111 122222 2211
Q ss_pred -CCCCceeeEEeccccccCCChHHHHHHHHhcccCCcEEEEEe
Q 018740 244 -FASSSIDAVHAGAAIHCWSSPSTGVAEISRVLRPGGVFVGTT 285 (351)
Q Consensus 244 -~~~~~fD~V~~~~vl~h~~d~~~~l~~i~~~LkpgG~li~~~ 285 (351)
.....+|+|+.+-.- ..+....+.|+++|.+++..
T Consensus 222 ~~~~~g~Dvvid~~g~-------~~~~~~~~~l~~~G~iv~~G 257 (342)
T 4eye_A 222 ATGGAGVDMVVDPIGG-------PAFDDAVRTLASEGRLLVVG 257 (342)
T ss_dssp HTTTSCEEEEEESCC---------CHHHHHHTEEEEEEEEEC-
T ss_pred HhCCCCceEEEECCch-------hHHHHHHHhhcCCCEEEEEE
Confidence 122369999865432 14778889999999998754
No 361
>3jv7_A ADH-A; dehydrogenase, nucleotide binding, rossmann-fold, oxidoreduc; HET: NAD; 2.00A {Rhodococcus ruber} PDB: 2xaa_A*
Probab=92.01 E-value=0.71 Score=41.92 Aligned_cols=97 Identities=13% Similarity=0.132 Sum_probs=64.7
Q ss_pred CCCCCCeEEEEcCcc-CHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHhhhCCCCCCCeEEEEecCCCCC-----C-CC
Q 018740 174 KPVLGGNIIDASCGS-GLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLP-----F-AS 246 (351)
Q Consensus 174 ~~~~~~~vLDiGcG~-G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~g~~~~~i~~~~~d~~~lp-----~-~~ 246 (351)
...++.+||-+|+|. |.++..+++.....+|+++|.+++-++.+++. | .. ..+..+ .++. . ..
T Consensus 168 ~~~~g~~vlv~GaG~vG~~a~qla~~~g~~~Vi~~~~~~~~~~~~~~l-----G--a~--~~i~~~-~~~~~~v~~~t~g 237 (345)
T 3jv7_A 168 LLGPGSTAVVIGVGGLGHVGIQILRAVSAARVIAVDLDDDRLALAREV-----G--AD--AAVKSG-AGAADAIRELTGG 237 (345)
T ss_dssp GCCTTCEEEEECCSHHHHHHHHHHHHHCCCEEEEEESCHHHHHHHHHT-----T--CS--EEEECS-TTHHHHHHHHHGG
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHc-----C--CC--EEEcCC-CcHHHHHHHHhCC
Confidence 456688999999876 78888887753245999999999988888763 1 11 122211 1110 0 12
Q ss_pred CceeeEEeccccccCCChHHHHHHHHhcccCCcEEEEEee
Q 018740 247 SSIDAVHAGAAIHCWSSPSTGVAEISRVLRPGGVFVGTTY 286 (351)
Q Consensus 247 ~~fD~V~~~~vl~h~~d~~~~l~~i~~~LkpgG~li~~~~ 286 (351)
..+|+|+-. ... ...++...+.|+++|.+++...
T Consensus 238 ~g~d~v~d~-----~G~-~~~~~~~~~~l~~~G~iv~~G~ 271 (345)
T 3jv7_A 238 QGATAVFDF-----VGA-QSTIDTAQQVVAVDGHISVVGI 271 (345)
T ss_dssp GCEEEEEES-----SCC-HHHHHHHHHHEEEEEEEEECSC
T ss_pred CCCeEEEEC-----CCC-HHHHHHHHHHHhcCCEEEEECC
Confidence 369998843 222 2368889999999999988654
No 362
>2zig_A TTHA0409, putative modification methylase; methyltransferase, S- adenosylmethionine, structural genomics, NPPSFA; 2.10A {Thermus thermophilus} PDB: 2zie_A* 2zif_A
Probab=92.00 E-value=0.29 Score=43.79 Aligned_cols=57 Identities=23% Similarity=0.220 Sum_probs=39.7
Q ss_pred CCeEEEEecCCC-CC-CCCCceeeEEeccccccC--------------------CChHHHHHHHHhcccCCcEEEEEee
Q 018740 230 ENFLLVRADISR-LP-FASSSIDAVHAGAAIHCW--------------------SSPSTGVAEISRVLRPGGVFVGTTY 286 (351)
Q Consensus 230 ~~i~~~~~d~~~-lp-~~~~~fD~V~~~~vl~h~--------------------~d~~~~l~~i~~~LkpgG~li~~~~ 286 (351)
.++.++++|..+ ++ +++++||+|+++--.... ......++++.++|+|||.+++...
T Consensus 20 ~~~~i~~gD~~~~l~~l~~~s~DlIvtdPPY~~~~~y~~~~~~~~~~~~~~~~l~~l~~~~~~~~rvLk~~G~l~i~~~ 98 (297)
T 2zig_A 20 GVHRLHVGDAREVLASFPEASVHLVVTSPPYWTLKRYEDTPGQLGHIEDYEAFLDELDRVWREVFRLLVPGGRLVIVVG 98 (297)
T ss_dssp -CEEEEESCHHHHHTTSCTTCEEEEEECCCCCCCC-------CCHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred cCCEEEECcHHHHHhhCCCCceeEEEECCCCCCccccCCChhhhcccccHHHHHHHHHHHHHHHHHHcCCCcEEEEEEC
Confidence 457889999866 22 457899999986433211 0123567899999999999988654
No 363
>2jne_A Hypothetical protein YFGJ; zinc fingers, two zinc, structural genomics, PSI-2, protein structure initiative; NMR {Escherichia coli} SCOP: g.41.18.1
Probab=91.99 E-value=0.052 Score=39.31 Aligned_cols=36 Identities=22% Similarity=0.389 Sum_probs=22.9
Q ss_pred ccccCCCceeCCCCCCCcccccCCCcccccccCCccccccccccccc
Q 018740 64 EASTSKNVLACPICYKPLTWIGDSSLSIESAAGSSLQCNTCKKTYSG 110 (351)
Q Consensus 64 ~~~~~~~~l~CP~C~~~l~~~~~~~~~~~~~~~~~~~C~~C~~~~~~ 110 (351)
++++..+...||.|+.++.+.+ +.+.|..|+..|..
T Consensus 25 ~~~~~~M~~~CP~Cq~eL~~~g-----------~~~hC~~C~~~f~~ 60 (101)
T 2jne_A 25 VPRGSHMELHCPQCQHVLDQDN-----------GHARCRSCGEFIEM 60 (101)
T ss_dssp ------CCCBCSSSCSBEEEET-----------TEEEETTTCCEEEE
T ss_pred ccCcccccccCccCCCcceecC-----------CEEECccccchhhc
Confidence 3455556689999999998765 56668888765543
No 364
>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A*
Probab=91.99 E-value=0.56 Score=42.24 Aligned_cols=100 Identities=12% Similarity=0.027 Sum_probs=64.8
Q ss_pred hccCCCCCCeEEEEc-C-ccCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHhhhCCCCCCCeEEEEecCCCCC-----
Q 018740 171 GYLKPVLGGNIIDAS-C-GSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLP----- 243 (351)
Q Consensus 171 ~~l~~~~~~~vLDiG-c-G~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~g~~~~~i~~~~~d~~~lp----- 243 (351)
...+..++.+||-+| + |.|..+..+++.. +.+|+++|.+++-++.+++. ... ..+..+-.++.
T Consensus 134 ~~~~~~~g~~VlV~Ga~g~iG~~~~~~a~~~-Ga~Vi~~~~~~~~~~~~~~~--------Ga~-~~~~~~~~~~~~~~~~ 203 (325)
T 3jyn_A 134 QTYQVKPGEIILFHAAAGGVGSLACQWAKAL-GAKLIGTVSSPEKAAHAKAL--------GAW-ETIDYSHEDVAKRVLE 203 (325)
T ss_dssp TTSCCCTTCEEEESSTTSHHHHHHHHHHHHH-TCEEEEEESSHHHHHHHHHH--------TCS-EEEETTTSCHHHHHHH
T ss_pred HhcCCCCCCEEEEEcCCcHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHc--------CCC-EEEeCCCccHHHHHHH
Confidence 344567789999999 3 3577777776652 23999999999988888763 111 12211111110
Q ss_pred -CCCCceeeEEeccccccCCChHHHHHHHHhcccCCcEEEEEeec
Q 018740 244 -FASSSIDAVHAGAAIHCWSSPSTGVAEISRVLRPGGVFVGTTYI 287 (351)
Q Consensus 244 -~~~~~fD~V~~~~vl~h~~d~~~~l~~i~~~LkpgG~li~~~~~ 287 (351)
.....+|+|+.+-.- ..+....+.|+++|.+++....
T Consensus 204 ~~~~~g~Dvvid~~g~-------~~~~~~~~~l~~~G~iv~~g~~ 241 (325)
T 3jyn_A 204 LTDGKKCPVVYDGVGQ-------DTWLTSLDSVAPRGLVVSFGNA 241 (325)
T ss_dssp HTTTCCEEEEEESSCG-------GGHHHHHTTEEEEEEEEECCCT
T ss_pred HhCCCCceEEEECCCh-------HHHHHHHHHhcCCCEEEEEecC
Confidence 123469999864432 3477888999999999886543
No 365
>4h0n_A DNMT2; SAH binding, transferase; HET: SAH; 2.71A {Spodoptera frugiperda}
Probab=91.92 E-value=0.21 Score=45.64 Aligned_cols=124 Identities=15% Similarity=0.143 Sum_probs=78.6
Q ss_pred CeEEEEcCccCHHHHHHHHhCCC-CeEEEEeCCHHHHHHHHHHHhhhCCCCCCCeEEEEecCCCCCC---CCCceeeEEe
Q 018740 179 GNIIDASCGSGLFSRIFAKSGLF-SLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLPF---ASSSIDAVHA 254 (351)
Q Consensus 179 ~~vLDiGcG~G~~~~~l~~~~~~-~~v~gvD~s~~~~~~a~~~~~~~~g~~~~~i~~~~~d~~~lp~---~~~~fD~V~~ 254 (351)
-+++|+-||.|.+...+.+.|.. ..+.++|+++.+.+.-+.++ +...++.+|+.++.. +...+|+++.
T Consensus 4 ~~~idLFaG~GG~~~G~~~aG~~~~~v~a~e~d~~a~~ty~~N~--------~~~~~~~~DI~~~~~~~~~~~~~D~l~g 75 (333)
T 4h0n_A 4 HKILELYSGIGGMHCAWKESGLDGEIVAAVDINTVANSVYKHNF--------PETNLLNRNIQQLTPQVIKKWNVDTILM 75 (333)
T ss_dssp EEEEEETCTTTHHHHHHHHHTCSEEEEEEECCCHHHHHHHHHHC--------TTSCEECCCGGGCCHHHHHHTTCCEEEE
T ss_pred CEEEEECcCccHHHHHHHHcCCCceEEEEEeCCHHHHHHHHHhC--------CCCceeccccccCCHHHhccCCCCEEEe
Confidence 37999999999999999988742 35789999999888887763 444567788877642 2235899996
Q ss_pred cccccc---------CCChH-HHHHHHHh---ccc-CCcEEEEEeeccCCCCCcchHHHHHHHHHhhccCCccCCCHHHH
Q 018740 255 GAAIHC---------WSSPS-TGVAEISR---VLR-PGGVFVGTTYIVDGPFNLIPFSRLLRQNMMQISGSYTFLSEREI 320 (351)
Q Consensus 255 ~~vl~h---------~~d~~-~~l~~i~~---~Lk-pgG~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~l 320 (351)
..-... ..|+. .++.++.+ .++ | .+++.+.... ... . -..+.+
T Consensus 76 gpPCQ~fS~ag~~~~~~d~r~~L~~~~~r~i~~~~~P--~~~vlENV~g----l~~--------------~---~~~~~i 132 (333)
T 4h0n_A 76 SPPCQPFTRNGKYLDDNDPRTNSFLYLIGILDQLDNV--DYILMENVKG----FEN--------------S---TVRNLF 132 (333)
T ss_dssp CCCCCCSEETTEECCTTCTTSCCHHHHHHHGGGCTTC--CEEEEEECTT----GGG--------------S---HHHHHH
T ss_pred cCCCcchhhhhhccCCcCcccccHHHHHHHHHHhcCC--CEEEEecchh----hhh--------------h---hHHHHH
Confidence 533222 23333 23344444 444 5 3444443321 000 0 013578
Q ss_pred HHHHHHCCCeEEE
Q 018740 321 EDLCRACGLVDFK 333 (351)
Q Consensus 321 ~~ll~~aGf~~v~ 333 (351)
.+.|++.|+.+..
T Consensus 133 ~~~l~~~GY~v~~ 145 (333)
T 4h0n_A 133 IDKLKECNFIYQE 145 (333)
T ss_dssp HHHHHHTTEEEEE
T ss_pred HHHHHhCCCeEEE
Confidence 8889999998755
No 366
>1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1
Probab=91.89 E-value=0.99 Score=41.19 Aligned_cols=96 Identities=14% Similarity=0.068 Sum_probs=62.4
Q ss_pred hccCCCCCCeEEEEcC--ccCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHhhhCCCCCCCeEEEEecCCCCC-----
Q 018740 171 GYLKPVLGGNIIDASC--GSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLP----- 243 (351)
Q Consensus 171 ~~l~~~~~~~vLDiGc--G~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~g~~~~~i~~~~~d~~~lp----- 243 (351)
...+..++.+||-.|+ |.|..+..+++.. +.+|+++|.+++.++.+++. ... .. .|..+..
T Consensus 164 ~~~~~~~g~~vlV~GasggiG~~~~~~a~~~-Ga~Vi~~~~~~~~~~~~~~~--------ga~-~~--~d~~~~~~~~~~ 231 (351)
T 1yb5_A 164 HSACVKAGESVLVHGASGGVGLAACQIARAY-GLKILGTAGTEEGQKIVLQN--------GAH-EV--FNHREVNYIDKI 231 (351)
T ss_dssp TTSCCCTTCEEEEETCSSHHHHHHHHHHHHT-TCEEEEEESSHHHHHHHHHT--------TCS-EE--EETTSTTHHHHH
T ss_pred HhhCCCCcCEEEEECCCChHHHHHHHHHHHC-CCEEEEEeCChhHHHHHHHc--------CCC-EE--EeCCCchHHHHH
Confidence 3445667889999997 4577666666543 34999999999888776542 111 11 2322211
Q ss_pred ---CCCCceeeEEeccccccCCChHHHHHHHHhcccCCcEEEEEe
Q 018740 244 ---FASSSIDAVHAGAAIHCWSSPSTGVAEISRVLRPGGVFVGTT 285 (351)
Q Consensus 244 ---~~~~~fD~V~~~~vl~h~~d~~~~l~~i~~~LkpgG~li~~~ 285 (351)
.....+|+|+.+..- ..+....+.|+++|.+++..
T Consensus 232 ~~~~~~~~~D~vi~~~G~-------~~~~~~~~~l~~~G~iv~~g 269 (351)
T 1yb5_A 232 KKYVGEKGIDIIIEMLAN-------VNLSKDLSLLSHGGRVIVVG 269 (351)
T ss_dssp HHHHCTTCEEEEEESCHH-------HHHHHHHHHEEEEEEEEECC
T ss_pred HHHcCCCCcEEEEECCCh-------HHHHHHHHhccCCCEEEEEe
Confidence 112369999865431 35778889999999988754
No 367
>1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A*
Probab=91.76 E-value=0.41 Score=43.62 Aligned_cols=95 Identities=16% Similarity=0.224 Sum_probs=62.0
Q ss_pred cCCCCCCeEEEEcCc--cCHHHHHHHHh--CCCCeEEEEeCCHHHHHHHHHHHhhhCCCCCCCeEEEEecCCCCC-----
Q 018740 173 LKPVLGGNIIDASCG--SGLFSRIFAKS--GLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLP----- 243 (351)
Q Consensus 173 l~~~~~~~vLDiGcG--~G~~~~~l~~~--~~~~~v~gvD~s~~~~~~a~~~~~~~~g~~~~~i~~~~~d~~~lp----- 243 (351)
.+..++.+||-+|+| .|..+..+++. +. +|+++|.+++.++.+++. .... .+ |..+..
T Consensus 166 ~~~~~g~~vlV~Gagg~iG~~~~~~a~~~~Ga--~Vi~~~~~~~~~~~~~~~--------g~~~-~~--~~~~~~~~~~~ 232 (347)
T 1jvb_A 166 ASLDPTKTLLVVGAGGGLGTMAVQIAKAVSGA--TIIGVDVREEAVEAAKRA--------GADY-VI--NASMQDPLAEI 232 (347)
T ss_dssp TTCCTTCEEEEETTTSHHHHHHHHHHHHHTCC--EEEEEESSHHHHHHHHHH--------TCSE-EE--ETTTSCHHHHH
T ss_pred cCCCCCCEEEEECCCccHHHHHHHHHHHcCCC--eEEEEcCCHHHHHHHHHh--------CCCE-Ee--cCCCccHHHHH
Confidence 456678899999997 45555555544 54 899999999888887653 1111 11 222111
Q ss_pred --CCC-CceeeEEeccccccCCChHHHHHHHHhcccCCcEEEEEee
Q 018740 244 --FAS-SSIDAVHAGAAIHCWSSPSTGVAEISRVLRPGGVFVGTTY 286 (351)
Q Consensus 244 --~~~-~~fD~V~~~~vl~h~~d~~~~l~~i~~~LkpgG~li~~~~ 286 (351)
... +.+|+|+.+.. . ...++...+.|+++|.++....
T Consensus 233 ~~~~~~~~~d~vi~~~g-----~-~~~~~~~~~~l~~~G~iv~~g~ 272 (347)
T 1jvb_A 233 RRITESKGVDAVIDLNN-----S-EKTLSVYPKALAKQGKYVMVGL 272 (347)
T ss_dssp HHHTTTSCEEEEEESCC-----C-HHHHTTGGGGEEEEEEEEECCS
T ss_pred HHHhcCCCceEEEECCC-----C-HHHHHHHHHHHhcCCEEEEECC
Confidence 112 47999985433 1 3457888899999999887543
No 368
>2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus}
Probab=91.62 E-value=1 Score=40.93 Aligned_cols=95 Identities=15% Similarity=0.093 Sum_probs=63.2
Q ss_pred cCCCCCCeEEEEcC--ccCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHhhhCCCCCCCeEEEEecCCCCC-------
Q 018740 173 LKPVLGGNIIDASC--GSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLP------- 243 (351)
Q Consensus 173 l~~~~~~~vLDiGc--G~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~g~~~~~i~~~~~d~~~lp------- 243 (351)
.+..++.+||-+|+ |.|..+..+++.. ..+|+++|.+++.++.+++. | .. .. .|..+..
T Consensus 162 ~~~~~g~~vlV~Gasg~iG~~~~~~a~~~-G~~Vi~~~~~~~~~~~~~~~-----g--a~--~~--~d~~~~~~~~~~~~ 229 (343)
T 2eih_A 162 LGVRPGDDVLVMAAGSGVSVAAIQIAKLF-GARVIATAGSEDKLRRAKAL-----G--AD--ET--VNYTHPDWPKEVRR 229 (343)
T ss_dssp SCCCTTCEEEECSTTSTTHHHHHHHHHHT-TCEEEEEESSHHHHHHHHHH-----T--CS--EE--EETTSTTHHHHHHH
T ss_pred cCCCCCCEEEEECCCchHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHhc-----C--CC--EE--EcCCcccHHHHHHH
Confidence 35567889999998 4677777776653 34999999999888888653 1 11 11 2332211
Q ss_pred -CCCCceeeEEeccccccCCChHHHHHHHHhcccCCcEEEEEee
Q 018740 244 -FASSSIDAVHAGAAIHCWSSPSTGVAEISRVLRPGGVFVGTTY 286 (351)
Q Consensus 244 -~~~~~fD~V~~~~vl~h~~d~~~~l~~i~~~LkpgG~li~~~~ 286 (351)
.....+|+|+.+.. . ..++.+.+.|+++|.++....
T Consensus 230 ~~~~~~~d~vi~~~g-~------~~~~~~~~~l~~~G~~v~~g~ 266 (343)
T 2eih_A 230 LTGGKGADKVVDHTG-A------LYFEGVIKATANGGRIAIAGA 266 (343)
T ss_dssp HTTTTCEEEEEESSC-S------SSHHHHHHHEEEEEEEEESSC
T ss_pred HhCCCCceEEEECCC-H------HHHHHHHHhhccCCEEEEEec
Confidence 11246999986544 2 246778899999999887544
No 369
>2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A*
Probab=91.52 E-value=0.99 Score=41.37 Aligned_cols=100 Identities=12% Similarity=0.077 Sum_probs=64.7
Q ss_pred hccCCCCCCeEEEEc--CccCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHhhhCCCCCCCeEEEEecCCCCC-----
Q 018740 171 GYLKPVLGGNIIDAS--CGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLP----- 243 (351)
Q Consensus 171 ~~l~~~~~~~vLDiG--cG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~g~~~~~i~~~~~d~~~lp----- 243 (351)
...+..++.+||-+| .|.|..+..+++.. +.+|+++|.+++.++.+++. ... ..+..+-.++.
T Consensus 157 ~~~~~~~g~~VlV~Ga~G~iG~~~~q~a~~~-Ga~Vi~~~~~~~~~~~~~~~--------Ga~-~~~~~~~~~~~~~~~~ 226 (362)
T 2c0c_A 157 ELGGLSEGKKVLVTAAAGGTGQFAMQLSKKA-KCHVIGTCSSDEKSAFLKSL--------GCD-RPINYKTEPVGTVLKQ 226 (362)
T ss_dssp HHTCCCTTCEEEETTTTBTTHHHHHHHHHHT-TCEEEEEESSHHHHHHHHHT--------TCS-EEEETTTSCHHHHHHH
T ss_pred HhcCCCCCCEEEEeCCCcHHHHHHHHHHHhC-CCEEEEEECCHHHHHHHHHc--------CCc-EEEecCChhHHHHHHH
Confidence 334566788999999 34588777777653 34999999998888877752 111 11211111110
Q ss_pred CCCCceeeEEeccccccCCChHHHHHHHHhcccCCcEEEEEeec
Q 018740 244 FASSSIDAVHAGAAIHCWSSPSTGVAEISRVLRPGGVFVGTTYI 287 (351)
Q Consensus 244 ~~~~~fD~V~~~~vl~h~~d~~~~l~~i~~~LkpgG~li~~~~~ 287 (351)
.....+|+|+.+-. . ..++.+.+.|+++|.++.....
T Consensus 227 ~~~~g~D~vid~~g-----~--~~~~~~~~~l~~~G~iv~~g~~ 263 (362)
T 2c0c_A 227 EYPEGVDVVYESVG-----G--AMFDLAVDALATKGRLIVIGFI 263 (362)
T ss_dssp HCTTCEEEEEECSC-----T--HHHHHHHHHEEEEEEEEECCCG
T ss_pred hcCCCCCEEEECCC-----H--HHHHHHHHHHhcCCEEEEEeCC
Confidence 11246999985433 2 4678889999999998876543
No 370
>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A
Probab=91.27 E-value=0.29 Score=44.94 Aligned_cols=98 Identities=10% Similarity=0.110 Sum_probs=61.5
Q ss_pred cCCCCCCeEEEEcCcc-CHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHhhhCCCCCCCeEEEEecCC-CC--CCCCCc
Q 018740 173 LKPVLGGNIIDASCGS-GLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADIS-RL--PFASSS 248 (351)
Q Consensus 173 l~~~~~~~vLDiGcG~-G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~g~~~~~i~~~~~d~~-~l--p~~~~~ 248 (351)
.+..++.+||-+|+|. |.++..+++.. ..+|+++|.++.-++.+++. | .. .++..+-. ++ ... +.
T Consensus 175 ~~~~~g~~VlV~GaG~vG~~~~qlak~~-Ga~Vi~~~~~~~~~~~~~~l-----G--a~--~v~~~~~~~~~~~~~~-~~ 243 (360)
T 1piw_A 175 NGCGPGKKVGIVGLGGIGSMGTLISKAM-GAETYVISRSSRKREDAMKM-----G--AD--HYIATLEEGDWGEKYF-DT 243 (360)
T ss_dssp TTCSTTCEEEEECCSHHHHHHHHHHHHH-TCEEEEEESSSTTHHHHHHH-----T--CS--EEEEGGGTSCHHHHSC-SC
T ss_pred cCCCCCCEEEEECCCHHHHHHHHHHHHC-CCEEEEEcCCHHHHHHHHHc-----C--CC--EEEcCcCchHHHHHhh-cC
Confidence 4566789999999864 77777777652 23899999999888888763 1 11 12221111 11 011 46
Q ss_pred eeeEEeccccccCCChHHHHHHHHhcccCCcEEEEEe
Q 018740 249 IDAVHAGAAIHCWSSPSTGVAEISRVLRPGGVFVGTT 285 (351)
Q Consensus 249 fD~V~~~~vl~h~~d~~~~l~~i~~~LkpgG~li~~~ 285 (351)
+|+|+..-.-. ....++...+.|+++|.++...
T Consensus 244 ~D~vid~~g~~----~~~~~~~~~~~l~~~G~iv~~g 276 (360)
T 1piw_A 244 FDLIVVCASSL----TDIDFNIMPKAMKVGGRIVSIS 276 (360)
T ss_dssp EEEEEECCSCS----TTCCTTTGGGGEEEEEEEEECC
T ss_pred CCEEEECCCCC----cHHHHHHHHHHhcCCCEEEEec
Confidence 99998654320 0122556778999999988754
No 371
>2b5w_A Glucose dehydrogenase; nucleotide binding motif, oxidoreductase; HET: FLC NAP; 1.60A {Haloferax mediterranei} PDB: 2b5v_A* 2vwg_A* 2vwh_A* 2vwp_A* 2vwq_A*
Probab=91.27 E-value=0.91 Score=41.48 Aligned_cols=90 Identities=17% Similarity=0.168 Sum_probs=59.0
Q ss_pred CeEEEEcCcc-CHHH-HHHH-HhCCCCe-EEEEeCCHH---HHHHHHHHHhhhCCCCCCCeEEEEecCCCCCCC-----C
Q 018740 179 GNIIDASCGS-GLFS-RIFA-KSGLFSL-VVALDYSEN---MLKQCYEFVQQESNFPKENFLLVRADISRLPFA-----S 246 (351)
Q Consensus 179 ~~vLDiGcG~-G~~~-~~l~-~~~~~~~-v~gvD~s~~---~~~~a~~~~~~~~g~~~~~i~~~~~d~~~lp~~-----~ 246 (351)
.+||-+|+|. |.++ ..++ +.. ..+ |+++|.+++ -++.+++. ....+ |..+..+. .
T Consensus 174 ~~VlV~GaG~vG~~a~iqla~k~~-Ga~~Vi~~~~~~~~~~~~~~~~~l----------Ga~~v--~~~~~~~~~i~~~~ 240 (357)
T 2b5w_A 174 SSAFVLGNGSLGLLTLAMLKVDDK-GYENLYCLGRRDRPDPTIDIIEEL----------DATYV--DSRQTPVEDVPDVY 240 (357)
T ss_dssp CEEEEECCSHHHHHHHHHHHHCTT-CCCEEEEEECCCSSCHHHHHHHHT----------TCEEE--ETTTSCGGGHHHHS
T ss_pred CEEEEECCCHHHHHHHHHHHHHHc-CCcEEEEEeCCcccHHHHHHHHHc----------CCccc--CCCccCHHHHHHhC
Confidence 8999999864 7777 7777 543 335 999999987 77877652 12222 33221110 2
Q ss_pred CceeeEEeccccccCCChHHHHHHHHhcccCCcEEEEEeec
Q 018740 247 SSIDAVHAGAAIHCWSSPSTGVAEISRVLRPGGVFVGTTYI 287 (351)
Q Consensus 247 ~~fD~V~~~~vl~h~~d~~~~l~~i~~~LkpgG~li~~~~~ 287 (351)
+.+|+|+-. ...+ ..++.+.+.|+++|.++.....
T Consensus 241 gg~Dvvid~-----~g~~-~~~~~~~~~l~~~G~iv~~g~~ 275 (357)
T 2b5w_A 241 EQMDFIYEA-----TGFP-KHAIQSVQALAPNGVGALLGVP 275 (357)
T ss_dssp CCEEEEEEC-----SCCH-HHHHHHHHHEEEEEEEEECCCC
T ss_pred CCCCEEEEC-----CCCh-HHHHHHHHHHhcCCEEEEEeCC
Confidence 368998843 2222 3578889999999998876543
No 372
>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A
Probab=91.24 E-value=0.97 Score=40.95 Aligned_cols=95 Identities=21% Similarity=0.173 Sum_probs=62.5
Q ss_pred CCCCCCeEEEEcCcc-CHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHhhhCCCCCCCeEEEEecCCCCCCC------C
Q 018740 174 KPVLGGNIIDASCGS-GLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLPFA------S 246 (351)
Q Consensus 174 ~~~~~~~vLDiGcG~-G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~g~~~~~i~~~~~d~~~lp~~------~ 246 (351)
+..++.+||-+|+|. |..+..+++.. ..+|+++|.++..++.+++. | .. . ..|..+..+. .
T Consensus 161 ~~~~g~~VlV~GaG~vG~~~~~~a~~~-Ga~Vi~~~~~~~~~~~~~~l-----G--a~--~--~~d~~~~~~~~~~~~~~ 228 (339)
T 1rjw_A 161 GAKPGEWVAIYGIGGLGHVAVQYAKAM-GLNVVAVDIGDEKLELAKEL-----G--AD--L--VVNPLKEDAAKFMKEKV 228 (339)
T ss_dssp TCCTTCEEEEECCSTTHHHHHHHHHHT-TCEEEEECSCHHHHHHHHHT-----T--CS--E--EECTTTSCHHHHHHHHH
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHC-----C--CC--E--EecCCCccHHHHHHHHh
Confidence 556788999999864 77777776653 34999999999888887652 1 11 1 1233221100 0
Q ss_pred CceeeEEeccccccCCChHHHHHHHHhcccCCcEEEEEee
Q 018740 247 SSIDAVHAGAAIHCWSSPSTGVAEISRVLRPGGVFVGTTY 286 (351)
Q Consensus 247 ~~fD~V~~~~vl~h~~d~~~~l~~i~~~LkpgG~li~~~~ 286 (351)
+.+|+|+.... . ...++...+.|+++|.++....
T Consensus 229 ~~~d~vid~~g-----~-~~~~~~~~~~l~~~G~~v~~g~ 262 (339)
T 1rjw_A 229 GGVHAAVVTAV-----S-KPAFQSAYNSIRRGGACVLVGL 262 (339)
T ss_dssp SSEEEEEESSC-----C-HHHHHHHHHHEEEEEEEEECCC
T ss_pred CCCCEEEECCC-----C-HHHHHHHHHHhhcCCEEEEecc
Confidence 46899885432 2 2457888999999999887543
No 373
>2k5c_A Uncharacterized protein PF0385; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; NMR {Pyrococcus furiosus}
Probab=91.03 E-value=0.032 Score=38.79 Aligned_cols=16 Identities=44% Similarity=1.159 Sum_probs=11.2
Q ss_pred CCceeCCCCCCCcccc
Q 018740 69 KNVLACPICYKPLTWI 84 (351)
Q Consensus 69 ~~~l~CP~C~~~l~~~ 84 (351)
-++..||+||.+|.+.
T Consensus 6 ~~~~~~PlCG~~L~W~ 21 (95)
T 2k5c_A 6 HHMAKCPICGSPLKWE 21 (95)
T ss_dssp --CEECSSSCCEECHH
T ss_pred cccccCCcCCCccCHH
Confidence 3567899999976544
No 374
>4a2c_A Galactitol-1-phosphate 5-dehydrogenase; oxidoreductase, metal binding-site; 1.87A {Escherichia coli}
Probab=90.98 E-value=2 Score=38.78 Aligned_cols=103 Identities=16% Similarity=0.065 Sum_probs=64.6
Q ss_pred HhccCCCCCCeEEEEcCcc-CHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHhhhCCCCCCCeEEEEecCCCCC-----
Q 018740 170 KGYLKPVLGGNIIDASCGS-GLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLP----- 243 (351)
Q Consensus 170 ~~~l~~~~~~~vLDiGcG~-G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~g~~~~~i~~~~~d~~~lp----- 243 (351)
.......++.+||=.|+|. |.++..+++......++++|.++.-++.+++. .-...+..+-.+.+
T Consensus 153 ~~~~~~~~g~~VlV~GaG~vG~~aiq~ak~~G~~~vi~~~~~~~k~~~a~~l---------Ga~~~i~~~~~~~~~~~~~ 223 (346)
T 4a2c_A 153 FHLAQGCENKNVIIIGAGTIGLLAIQCAVALGAKSVTAIDISSEKLALAKSF---------GAMQTFNSSEMSAPQMQSV 223 (346)
T ss_dssp HHHTTCCTTSEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHT---------TCSEEEETTTSCHHHHHHH
T ss_pred HHHhccCCCCEEEEECCCCcchHHHHHHHHcCCcEEEEEechHHHHHHHHHc---------CCeEEEeCCCCCHHHHHHh
Confidence 3344566788999999875 66666676664334678999999988888763 11122221111110
Q ss_pred -CCCCceeeEEeccccccCCChHHHHHHHHhcccCCcEEEEEeec
Q 018740 244 -FASSSIDAVHAGAAIHCWSSPSTGVAEISRVLRPGGVFVGTTYI 287 (351)
Q Consensus 244 -~~~~~fD~V~~~~vl~h~~d~~~~l~~i~~~LkpgG~li~~~~~ 287 (351)
.....+|+|+..- .. ...++...+.|++||.+++....
T Consensus 224 ~~~~~g~d~v~d~~-----G~-~~~~~~~~~~l~~~G~~v~~g~~ 262 (346)
T 4a2c_A 224 LRELRFNQLILETA-----GV-PQTVELAVEIAGPHAQLALVGTL 262 (346)
T ss_dssp HGGGCSSEEEEECS-----CS-HHHHHHHHHHCCTTCEEEECCCC
T ss_pred hcccCCcccccccc-----cc-cchhhhhhheecCCeEEEEEecc
Confidence 1124578877432 22 34578888999999999876543
No 375
>3nx4_A Putative oxidoreductase; csgid, structural genomics, center for struc genomics of infectious diseases, PSI, protein structure INI; HET: MSE NAP; 1.90A {Salmonella enterica subsp} PDB: 1o89_A 1o8c_A*
Probab=90.93 E-value=0.64 Score=41.76 Aligned_cols=91 Identities=13% Similarity=0.115 Sum_probs=59.8
Q ss_pred eEEEEcC--ccCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHhhhCCCCCCCeEEEEecCCCC-CCCCCceeeEEecc
Q 018740 180 NIIDASC--GSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRL-PFASSSIDAVHAGA 256 (351)
Q Consensus 180 ~vLDiGc--G~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~g~~~~~i~~~~~d~~~l-p~~~~~fD~V~~~~ 256 (351)
+||=+|+ |.|.++..+++.. ..+|+++|.+++-.+.+++. | ...-+-..+.... ....+.+|+|+-.
T Consensus 149 ~VlV~Ga~G~vG~~aiqla~~~-Ga~Vi~~~~~~~~~~~~~~l-----G---a~~vi~~~~~~~~~~~~~~~~d~v~d~- 218 (324)
T 3nx4_A 149 EVVVTGASGGVGSTAVALLHKL-GYQVAAVSGRESTHGYLKSL-----G---ANRILSRDEFAESRPLEKQLWAGAIDT- 218 (324)
T ss_dssp CEEESSTTSHHHHHHHHHHHHT-TCCEEEEESCGGGHHHHHHH-----T---CSEEEEGGGSSCCCSSCCCCEEEEEES-
T ss_pred eEEEECCCcHHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHhc-----C---CCEEEecCCHHHHHhhcCCCccEEEEC-
Confidence 4999997 4588888888764 34999999999988888764 1 1111111111111 1224579988743
Q ss_pred ccccCCChHHHHHHHHhcccCCcEEEEEee
Q 018740 257 AIHCWSSPSTGVAEISRVLRPGGVFVGTTY 286 (351)
Q Consensus 257 vl~h~~d~~~~l~~i~~~LkpgG~li~~~~ 286 (351)
... ..+....+.|+++|.++....
T Consensus 219 ----~g~--~~~~~~~~~l~~~G~iv~~G~ 242 (324)
T 3nx4_A 219 ----VGD--KVLAKVLAQMNYGGCVAACGL 242 (324)
T ss_dssp ----SCH--HHHHHHHHTEEEEEEEEECCC
T ss_pred ----CCc--HHHHHHHHHHhcCCEEEEEec
Confidence 322 278899999999999987643
No 376
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=90.92 E-value=2.9 Score=32.31 Aligned_cols=92 Identities=10% Similarity=0.067 Sum_probs=59.6
Q ss_pred CCeEEEEcCcc-CH-HHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHhhhCCCCCCCeEEEEecCCCCC----CCCCceee
Q 018740 178 GGNIIDASCGS-GL-FSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLP----FASSSIDA 251 (351)
Q Consensus 178 ~~~vLDiGcG~-G~-~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~g~~~~~i~~~~~d~~~lp----~~~~~fD~ 251 (351)
..+|+=+|+|. |. +...|.+.+. .|+++|.+++.++.+++ .++.++.+|..+.. ..-..+|+
T Consensus 7 ~~~viIiG~G~~G~~la~~L~~~g~--~v~vid~~~~~~~~~~~----------~g~~~i~gd~~~~~~l~~a~i~~ad~ 74 (140)
T 3fwz_A 7 CNHALLVGYGRVGSLLGEKLLASDI--PLVVIETSRTRVDELRE----------RGVRAVLGNAANEEIMQLAHLECAKW 74 (140)
T ss_dssp CSCEEEECCSHHHHHHHHHHHHTTC--CEEEEESCHHHHHHHHH----------TTCEEEESCTTSHHHHHHTTGGGCSE
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCC--CEEEEECCHHHHHHHHH----------cCCCEEECCCCCHHHHHhcCcccCCE
Confidence 35899999975 54 3444555565 99999999998887765 35677888886532 11246788
Q ss_pred EEeccccccCCChH--HHHHHHHhcccCCcEEEEEee
Q 018740 252 VHAGAAIHCWSSPS--TGVAEISRVLRPGGVFVGTTY 286 (351)
Q Consensus 252 V~~~~vl~h~~d~~--~~l~~i~~~LkpgG~li~~~~ 286 (351)
|+.. +++.. ..+....+.+.|+..++....
T Consensus 75 vi~~-----~~~~~~n~~~~~~a~~~~~~~~iiar~~ 106 (140)
T 3fwz_A 75 LILT-----IPNGYEAGEIVASARAKNPDIEIIARAH 106 (140)
T ss_dssp EEEC-----CSCHHHHHHHHHHHHHHCSSSEEEEEES
T ss_pred EEEE-----CCChHHHHHHHHHHHHHCCCCeEEEEEC
Confidence 8753 23332 224445667778887776443
No 377
>4eez_A Alcohol dehydrogenase 1; site-saturation mutagenesis, directed evolution, isobutyraldehyde, biofuel, oxidoreductase; HET: PG4; 1.90A {Lactococcus lactis subsp} PDB: 4eex_A*
Probab=90.90 E-value=1.7 Score=39.34 Aligned_cols=98 Identities=14% Similarity=0.155 Sum_probs=60.7
Q ss_pred cCCCCCCeEEEEcCcc-CHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHhhhCCCCCCCeEEEEecCCCC-----C-CC
Q 018740 173 LKPVLGGNIIDASCGS-GLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRL-----P-FA 245 (351)
Q Consensus 173 l~~~~~~~vLDiGcG~-G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~g~~~~~i~~~~~d~~~l-----p-~~ 245 (351)
....++.+||=+|+|. |.+...+++.....+|+++|.+++-++.+++. ... ..+...-.+. . ..
T Consensus 159 ~~~~~g~~VlV~GaG~~g~~a~~~a~~~~g~~Vi~~~~~~~r~~~~~~~--------Ga~-~~i~~~~~~~~~~v~~~t~ 229 (348)
T 4eez_A 159 SGVKPGDWQVIFGAGGLGNLAIQYAKNVFGAKVIAVDINQDKLNLAKKI--------GAD-VTINSGDVNPVDEIKKITG 229 (348)
T ss_dssp HTCCTTCEEEEECCSHHHHHHHHHHHHTSCCEEEEEESCHHHHHHHHHT--------TCS-EEEEC-CCCHHHHHHHHTT
T ss_pred cCCCCCCEEEEEcCCCccHHHHHHHHHhCCCEEEEEECcHHHhhhhhhc--------CCe-EEEeCCCCCHHHHhhhhcC
Confidence 3556788999999986 44555555543346999999999888877763 111 1221111111 0 12
Q ss_pred CCceeeEEeccccccCCChHHHHHHHHhcccCCcEEEEEe
Q 018740 246 SSSIDAVHAGAAIHCWSSPSTGVAEISRVLRPGGVFVGTT 285 (351)
Q Consensus 246 ~~~fD~V~~~~vl~h~~d~~~~l~~i~~~LkpgG~li~~~ 285 (351)
...+|.++.... -...+....+.|+++|.+++..
T Consensus 230 g~g~d~~~~~~~------~~~~~~~~~~~l~~~G~~v~~g 263 (348)
T 4eez_A 230 GLGVQSAIVCAV------ARIAFEQAVASLKPMGKMVAVA 263 (348)
T ss_dssp SSCEEEEEECCS------CHHHHHHHHHTEEEEEEEEECC
T ss_pred CCCceEEEEecc------CcchhheeheeecCCceEEEEe
Confidence 234666664322 2355788889999999988754
No 378
>1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=90.60 E-value=0.61 Score=42.00 Aligned_cols=95 Identities=11% Similarity=0.058 Sum_probs=62.2
Q ss_pred ccCCCCCCeEEEEcC--ccCHHHHHHHH-hCCCCeEEEEeCCHHHHHHHHHHHhhhCCCCCCCeEEEEecCCCCC-----
Q 018740 172 YLKPVLGGNIIDASC--GSGLFSRIFAK-SGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLP----- 243 (351)
Q Consensus 172 ~l~~~~~~~vLDiGc--G~G~~~~~l~~-~~~~~~v~gvD~s~~~~~~a~~~~~~~~g~~~~~i~~~~~d~~~lp----- 243 (351)
..+..++.+||-.|+ |.|.....+++ .|. +|+++|.+++.++.+++. .... . .|..+..
T Consensus 135 ~~~~~~g~~vlV~Ga~ggiG~~~~~~a~~~G~--~V~~~~~~~~~~~~~~~~--------g~~~-~--~~~~~~~~~~~~ 201 (327)
T 1qor_A 135 TYEIKPDEQFLFHAAAGGVGLIACQWAKALGA--KLIGTVGTAQKAQSALKA--------GAWQ-V--INYREEDLVERL 201 (327)
T ss_dssp TSCCCTTCEEEESSTTBHHHHHHHHHHHHHTC--EEEEEESSHHHHHHHHHH--------TCSE-E--EETTTSCHHHHH
T ss_pred hhCCCCCCEEEEECCCCHHHHHHHHHHHHcCC--EEEEEeCCHHHHHHHHHc--------CCCE-E--EECCCccHHHHH
Confidence 445667889999994 45666665555 454 999999999888877653 1111 1 2322211
Q ss_pred ---CCCCceeeEEeccccccCCChHHHHHHHHhcccCCcEEEEEee
Q 018740 244 ---FASSSIDAVHAGAAIHCWSSPSTGVAEISRVLRPGGVFVGTTY 286 (351)
Q Consensus 244 ---~~~~~fD~V~~~~vl~h~~d~~~~l~~i~~~LkpgG~li~~~~ 286 (351)
.....+|+|+.+.. ...++.+.+.|+++|.++....
T Consensus 202 ~~~~~~~~~D~vi~~~g-------~~~~~~~~~~l~~~G~iv~~g~ 240 (327)
T 1qor_A 202 KEITGGKKVRVVYDSVG-------RDTWERSLDCLQRRGLMVSFGN 240 (327)
T ss_dssp HHHTTTCCEEEEEECSC-------GGGHHHHHHTEEEEEEEEECCC
T ss_pred HHHhCCCCceEEEECCc-------hHHHHHHHHHhcCCCEEEEEec
Confidence 11236999986544 2347888899999999887654
No 379
>1vj0_A Alcohol dehydrogenase, zinc-containing; TM0436, structural G JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: b.35.1.2 c.2.1.1
Probab=90.35 E-value=0.81 Score=42.28 Aligned_cols=100 Identities=21% Similarity=0.265 Sum_probs=64.0
Q ss_pred ccC-CCCCCeEEEEcCcc-CHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHhhhCCCCCCCeEEEEec------C-CCC
Q 018740 172 YLK-PVLGGNIIDASCGS-GLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRAD------I-SRL 242 (351)
Q Consensus 172 ~l~-~~~~~~vLDiGcG~-G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~g~~~~~i~~~~~d------~-~~l 242 (351)
..+ ..++.+||-+|+|. |.++..+++.....+|+++|.+++-++.+++. | .. .++..+ + +.+
T Consensus 189 ~~~~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~~~~l-----G--a~--~vi~~~~~~~~~~~~~v 259 (380)
T 1vj0_A 189 EYPESFAGKTVVIQGAGPLGLFGVVIARSLGAENVIVIAGSPNRLKLAEEI-----G--AD--LTLNRRETSVEERRKAI 259 (380)
T ss_dssp TCSSCCBTCEEEEECCSHHHHHHHHHHHHTTBSEEEEEESCHHHHHHHHHT-----T--CS--EEEETTTSCHHHHHHHH
T ss_pred hcCCCCCCCEEEEECcCHHHHHHHHHHHHcCCceEEEEcCCHHHHHHHHHc-----C--Cc--EEEeccccCcchHHHHH
Confidence 345 66788999999764 77777777764214999999999988888752 1 11 122211 0 001
Q ss_pred -CC-CCCceeeEEeccccccCCChHHHHHHHHhcccCCcEEEEEee
Q 018740 243 -PF-ASSSIDAVHAGAAIHCWSSPSTGVAEISRVLRPGGVFVGTTY 286 (351)
Q Consensus 243 -p~-~~~~fD~V~~~~vl~h~~d~~~~l~~i~~~LkpgG~li~~~~ 286 (351)
.. ....+|+|+-.-. .+ ..++...+.|+++|.++....
T Consensus 260 ~~~~~g~g~Dvvid~~g-----~~-~~~~~~~~~l~~~G~iv~~G~ 299 (380)
T 1vj0_A 260 MDITHGRGADFILEATG-----DS-RALLEGSELLRRGGFYSVAGV 299 (380)
T ss_dssp HHHTTTSCEEEEEECSS-----CT-THHHHHHHHEEEEEEEEECCC
T ss_pred HHHhCCCCCcEEEECCC-----CH-HHHHHHHHHHhcCCEEEEEec
Confidence 01 1236999985432 11 347788899999999887543
No 380
>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A*
Probab=90.18 E-value=1.3 Score=40.21 Aligned_cols=97 Identities=11% Similarity=0.081 Sum_probs=63.8
Q ss_pred hccCCCCCCeEEEEcCcc-CHHHHHHHHhCCCC-eEEEEeCCHHHHHHHHHHHhhhCCCCCCCeEEEEecCCCCC-----
Q 018740 171 GYLKPVLGGNIIDASCGS-GLFSRIFAKSGLFS-LVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLP----- 243 (351)
Q Consensus 171 ~~l~~~~~~~vLDiGcG~-G~~~~~l~~~~~~~-~v~gvD~s~~~~~~a~~~~~~~~g~~~~~i~~~~~d~~~lp----- 243 (351)
...+. ++.+||-+|+|. |..+..+++.. .. +|+++|.+++.++.+++. | .. ..+ |..+..
T Consensus 162 ~~~~~-~g~~VlV~GaG~vG~~~~q~a~~~-Ga~~Vi~~~~~~~~~~~~~~~-----G--a~--~~~--~~~~~~~~~~v 228 (348)
T 2d8a_A 162 LAGPI-SGKSVLITGAGPLGLLGIAVAKAS-GAYPVIVSEPSDFRRELAKKV-----G--AD--YVI--NPFEEDVVKEV 228 (348)
T ss_dssp TTSCC-TTCCEEEECCSHHHHHHHHHHHHT-TCCSEEEECSCHHHHHHHHHH-----T--CS--EEE--CTTTSCHHHHH
T ss_pred HhcCC-CCCEEEEECCCHHHHHHHHHHHHc-CCCEEEEECCCHHHHHHHHHh-----C--CC--EEE--CCCCcCHHHHH
Confidence 33455 788999999864 77777777764 34 899999999888888753 1 11 111 221111
Q ss_pred ---CCCCceeeEEeccccccCCChHHHHHHHHhcccCCcEEEEEee
Q 018740 244 ---FASSSIDAVHAGAAIHCWSSPSTGVAEISRVLRPGGVFVGTTY 286 (351)
Q Consensus 244 ---~~~~~fD~V~~~~vl~h~~d~~~~l~~i~~~LkpgG~li~~~~ 286 (351)
.....+|+|+..-. . ...++.+.+.|+++|.++....
T Consensus 229 ~~~~~g~g~D~vid~~g-----~-~~~~~~~~~~l~~~G~iv~~g~ 268 (348)
T 2d8a_A 229 MDITDGNGVDVFLEFSG-----A-PKALEQGLQAVTPAGRVSLLGL 268 (348)
T ss_dssp HHHTTTSCEEEEEECSC-----C-HHHHHHHHHHEEEEEEEEECCC
T ss_pred HHHcCCCCCCEEEECCC-----C-HHHHHHHHHHHhcCCEEEEEcc
Confidence 11236999985432 2 3457888999999999887644
No 381
>2zb4_A Prostaglandin reductase 2; rossmann fold, alternative splicing, cytoplasm, NADP, oxidoreductase; HET: NAP 5OP; 1.63A {Homo sapiens} PDB: 2zb7_A* 2zb8_A* 2w98_A* 2vna_A* 2w4q_A* 1vj1_A 2zb3_A*
Probab=89.84 E-value=1.5 Score=39.84 Aligned_cols=98 Identities=5% Similarity=-0.061 Sum_probs=63.4
Q ss_pred hccCCCCC--CeEEEEcC--ccCHHHHHHHHhCCCC-eEEEEeCCHHHHHHHHHHHhhhCCCCCCCeEEEEecCCCCC--
Q 018740 171 GYLKPVLG--GNIIDASC--GSGLFSRIFAKSGLFS-LVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLP-- 243 (351)
Q Consensus 171 ~~l~~~~~--~~vLDiGc--G~G~~~~~l~~~~~~~-~v~gvD~s~~~~~~a~~~~~~~~g~~~~~i~~~~~d~~~lp-- 243 (351)
...+..++ .+||-.|+ |.|.....+++.. +. +|+++|.+++.++.+++.+ | .. ...|..+..
T Consensus 152 ~~~~~~~g~~~~vlI~GasggiG~~~~~~a~~~-Ga~~Vi~~~~~~~~~~~~~~~~----g---~~---~~~d~~~~~~~ 220 (357)
T 2zb4_A 152 EKGHITAGSNKTMVVSGAAGACGSVAGQIGHFL-GCSRVVGICGTHEKCILLTSEL----G---FD---AAINYKKDNVA 220 (357)
T ss_dssp HHSCCCTTSCCEEEESSTTBHHHHHHHHHHHHT-TCSEEEEEESCHHHHHHHHHTS----C---CS---EEEETTTSCHH
T ss_pred HhcCCCCCCccEEEEECCCcHHHHHHHHHHHHC-CCCeEEEEeCCHHHHHHHHHHc----C---Cc---eEEecCchHHH
Confidence 44456678 89999997 4466666666654 34 8999999987777766521 1 11 112332211
Q ss_pred -----CCCCceeeEEeccccccCCChHHHHHHHHhcccCCcEEEEEee
Q 018740 244 -----FASSSIDAVHAGAAIHCWSSPSTGVAEISRVLRPGGVFVGTTY 286 (351)
Q Consensus 244 -----~~~~~fD~V~~~~vl~h~~d~~~~l~~i~~~LkpgG~li~~~~ 286 (351)
...+.+|+|+.+.. ...++...+.|+++|.+++...
T Consensus 221 ~~~~~~~~~~~d~vi~~~G-------~~~~~~~~~~l~~~G~iv~~G~ 261 (357)
T 2zb4_A 221 EQLRESCPAGVDVYFDNVG-------GNISDTVISQMNENSHIILCGQ 261 (357)
T ss_dssp HHHHHHCTTCEEEEEESCC-------HHHHHHHHHTEEEEEEEEECCC
T ss_pred HHHHHhcCCCCCEEEECCC-------HHHHHHHHHHhccCcEEEEECC
Confidence 11126999986544 2568888999999999987644
No 382
>3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces coelicolor} PDB: 3hzz_A
Probab=89.74 E-value=1.4 Score=41.85 Aligned_cols=96 Identities=18% Similarity=0.216 Sum_probs=63.0
Q ss_pred cCCCCCCeEEEEcC-c-cCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHhhhCCCCCCCeEEEEecCCCCC-------
Q 018740 173 LKPVLGGNIIDASC-G-SGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLP------- 243 (351)
Q Consensus 173 l~~~~~~~vLDiGc-G-~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~g~~~~~i~~~~~d~~~lp------- 243 (351)
....++.+||=+|+ | .|.++..+++.. ..++++++.++.-++.+++. | .. .++...-.++.
T Consensus 224 ~~~~~g~~VlV~GasG~vG~~avqlak~~-Ga~vi~~~~~~~~~~~~~~l-----G--a~--~vi~~~~~d~~~~~~~~~ 293 (456)
T 3krt_A 224 AGMKQGDNVLIWGASGGLGSYATQFALAG-GANPICVVSSPQKAEICRAM-----G--AE--AIIDRNAEGYRFWKDENT 293 (456)
T ss_dssp TCCCTTCEEEETTTTSHHHHHHHHHHHHT-TCEEEEEESSHHHHHHHHHH-----T--CC--EEEETTTTTCCSEEETTE
T ss_pred cCCCCCCEEEEECCCCHHHHHHHHHHHHc-CCeEEEEECCHHHHHHHHhh-----C--Cc--EEEecCcCcccccccccc
Confidence 45667889999997 4 477777777764 34899999999888888764 1 11 11211111110
Q ss_pred ----------------CCCCceeeEEeccccccCCChHHHHHHHHhcccCCcEEEEEe
Q 018740 244 ----------------FASSSIDAVHAGAAIHCWSSPSTGVAEISRVLRPGGVFVGTT 285 (351)
Q Consensus 244 ----------------~~~~~fD~V~~~~vl~h~~d~~~~l~~i~~~LkpgG~li~~~ 285 (351)
.....+|+|+-+-. . ..+....+.|+++|.+++..
T Consensus 294 ~~~~~~~~~~~~i~~~t~g~g~Dvvid~~G-----~--~~~~~~~~~l~~~G~iv~~G 344 (456)
T 3krt_A 294 QDPKEWKRFGKRIRELTGGEDIDIVFEHPG-----R--ETFGASVFVTRKGGTITTCA 344 (456)
T ss_dssp ECHHHHHHHHHHHHHHHTSCCEEEEEECSC-----H--HHHHHHHHHEEEEEEEEESC
T ss_pred cchHHHHHHHHHHHHHhCCCCCcEEEEcCC-----c--hhHHHHHHHhhCCcEEEEEe
Confidence 01247999985322 2 46788889999999998754
No 383
>2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A*
Probab=89.73 E-value=1.3 Score=40.48 Aligned_cols=97 Identities=8% Similarity=-0.036 Sum_probs=62.4
Q ss_pred hccCCCCCCeEEEEcC--ccCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHhhhCCCCCCCeEEEEecCCCCC-----
Q 018740 171 GYLKPVLGGNIIDASC--GSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLP----- 243 (351)
Q Consensus 171 ~~l~~~~~~~vLDiGc--G~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~g~~~~~i~~~~~d~~~lp----- 243 (351)
...+..++.+||-.|+ |.|..+..+++.. +.+|+++|.+++.++.+++. .... . .|..+..
T Consensus 156 ~~~~~~~g~~vlV~Ga~ggiG~~~~~~a~~~-Ga~Vi~~~~~~~~~~~~~~~--------g~~~-~--~~~~~~~~~~~~ 223 (354)
T 2j8z_A 156 LVGNVQAGDYVLIHAGLSGVGTAAIQLTRMA-GAIPLVTAGSQKKLQMAEKL--------GAAA-G--FNYKKEDFSEAT 223 (354)
T ss_dssp TTSCCCTTCEEEESSTTSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHH--------TCSE-E--EETTTSCHHHHH
T ss_pred HhcCCCCCCEEEEECCccHHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHc--------CCcE-E--EecCChHHHHHH
Confidence 3445667889999984 4577666666553 34999999999888887543 1111 1 2222211
Q ss_pred ---CCCCceeeEEeccccccCCChHHHHHHHHhcccCCcEEEEEee
Q 018740 244 ---FASSSIDAVHAGAAIHCWSSPSTGVAEISRVLRPGGVFVGTTY 286 (351)
Q Consensus 244 ---~~~~~fD~V~~~~vl~h~~d~~~~l~~i~~~LkpgG~li~~~~ 286 (351)
.....+|+|+.+..- + .+....+.|+++|.+++...
T Consensus 224 ~~~~~~~~~d~vi~~~G~-----~--~~~~~~~~l~~~G~iv~~G~ 262 (354)
T 2j8z_A 224 LKFTKGAGVNLILDCIGG-----S--YWEKNVNCLALDGRWVLYGL 262 (354)
T ss_dssp HHHTTTSCEEEEEESSCG-----G--GHHHHHHHEEEEEEEEECCC
T ss_pred HHHhcCCCceEEEECCCc-----h--HHHHHHHhccCCCEEEEEec
Confidence 112469999865432 2 46778899999999887654
No 384
>4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli}
Probab=89.58 E-value=1 Score=41.06 Aligned_cols=99 Identities=11% Similarity=0.026 Sum_probs=63.6
Q ss_pred hccCCCCCCeEEEEcC--ccCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHhhhCCCCCCCeEEEEecCCCCC-----
Q 018740 171 GYLKPVLGGNIIDASC--GSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLP----- 243 (351)
Q Consensus 171 ~~l~~~~~~~vLDiGc--G~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~g~~~~~i~~~~~d~~~lp----- 243 (351)
...+..++.+||-+|+ |.|..+..+++.. +.+|+++|.+++.++.+++. ... ..+..+-.++.
T Consensus 161 ~~~~~~~g~~VlV~Gg~g~iG~~~~~~a~~~-Ga~Vi~~~~~~~~~~~~~~l--------Ga~-~~~~~~~~~~~~~~~~ 230 (353)
T 4dup_A 161 QMAGLTEGESVLIHGGTSGIGTTAIQLARAF-GAEVYATAGSTGKCEACERL--------GAK-RGINYRSEDFAAVIKA 230 (353)
T ss_dssp TTTCCCTTCEEEESSTTSHHHHHHHHHHHHT-TCEEEEEESSHHHHHHHHHH--------TCS-EEEETTTSCHHHHHHH
T ss_pred HhcCCCCCCEEEEEcCCCHHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHhc--------CCC-EEEeCCchHHHHHHHH
Confidence 4455667889999953 3577777777653 34999999999988888764 111 11211111110
Q ss_pred CCCCceeeEEeccccccCCChHHHHHHHHhcccCCcEEEEEee
Q 018740 244 FASSSIDAVHAGAAIHCWSSPSTGVAEISRVLRPGGVFVGTTY 286 (351)
Q Consensus 244 ~~~~~fD~V~~~~vl~h~~d~~~~l~~i~~~LkpgG~li~~~~ 286 (351)
...+.+|+|+.+-.- ..+....+.|+++|.+++...
T Consensus 231 ~~~~g~Dvvid~~g~-------~~~~~~~~~l~~~G~iv~~g~ 266 (353)
T 4dup_A 231 ETGQGVDIILDMIGA-------AYFERNIASLAKDGCLSIIAF 266 (353)
T ss_dssp HHSSCEEEEEESCCG-------GGHHHHHHTEEEEEEEEECCC
T ss_pred HhCCCceEEEECCCH-------HHHHHHHHHhccCCEEEEEEe
Confidence 013469999865432 247778899999999887653
No 385
>4f3n_A Uncharacterized ACR, COG1565 superfamily; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.75A {Burkholderia thailandensis} PDB: 4g67_A*
Probab=89.48 E-value=0.59 Score=44.02 Aligned_cols=46 Identities=13% Similarity=0.236 Sum_probs=36.0
Q ss_pred CCeEEEEcCccCHHHHHHHHh----CC-CCeEEEEeCCHHHHHHHHHHHhh
Q 018740 178 GGNIIDASCGSGLFSRIFAKS----GL-FSLVVALDYSENMLKQCYEFVQQ 223 (351)
Q Consensus 178 ~~~vLDiGcG~G~~~~~l~~~----~~-~~~v~gvD~s~~~~~~a~~~~~~ 223 (351)
...|+|+|.|+|.+...+.+. .+ ..+++.||+|+.+.+.-++++..
T Consensus 138 ~~~ivE~GaG~GtLa~DiL~~l~~~~~~~~~y~iVE~Sp~Lr~~Q~~~L~~ 188 (432)
T 4f3n_A 138 TRRVMEFGAGTGKLAAGLLTALAALGVELDEYAIVDLSGELRARQRETLGA 188 (432)
T ss_dssp CCEEEEESCTTSHHHHHHHHHHHHTTCCCSEEEEECTTSSSHHHHHHHHHH
T ss_pred CCeEEEeCCCccHHHHHHHHHHHhcCCCCceEEEEEcCHHHHHHHHHHHhc
Confidence 359999999999987776543 21 24799999999988888877764
No 386
>3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus}
Probab=89.41 E-value=2.2 Score=38.64 Aligned_cols=90 Identities=12% Similarity=0.152 Sum_probs=59.4
Q ss_pred CCCeEEEEc-Cc-cCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHhhhCCCCCCCeEEEEecCCC-C-----CCCCCc
Q 018740 177 LGGNIIDAS-CG-SGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISR-L-----PFASSS 248 (351)
Q Consensus 177 ~~~~vLDiG-cG-~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~g~~~~~i~~~~~d~~~-l-----p~~~~~ 248 (351)
++.+||-+| +| .|.++..+++.. ..+|+++|.+++-++.+++. | ... .+ |..+ + ......
T Consensus 150 ~g~~VlV~gg~G~vG~~a~qla~~~-Ga~Vi~~~~~~~~~~~~~~l-----G--a~~--vi--~~~~~~~~~~~~~~~~g 217 (346)
T 3fbg_A 150 EGKTLLIINGAGGVGSIATQIAKAY-GLRVITTASRNETIEWTKKM-----G--ADI--VL--NHKESLLNQFKTQGIEL 217 (346)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHT-TCEEEEECCSHHHHHHHHHH-----T--CSE--EE--CTTSCHHHHHHHHTCCC
T ss_pred CCCEEEEEcCCCHHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHhc-----C--CcE--EE--ECCccHHHHHHHhCCCC
Confidence 688999994 54 477777777753 34999999999988888774 1 111 11 1111 1 012346
Q ss_pred eeeEEeccccccCCChHHHHHHHHhcccCCcEEEEE
Q 018740 249 IDAVHAGAAIHCWSSPSTGVAEISRVLRPGGVFVGT 284 (351)
Q Consensus 249 fD~V~~~~vl~h~~d~~~~l~~i~~~LkpgG~li~~ 284 (351)
+|+|+.+.. -...+..+.+.|+++|.++..
T Consensus 218 ~Dvv~d~~g------~~~~~~~~~~~l~~~G~iv~~ 247 (346)
T 3fbg_A 218 VDYVFCTFN------TDMYYDDMIQLVKPRGHIATI 247 (346)
T ss_dssp EEEEEESSC------HHHHHHHHHHHEEEEEEEEES
T ss_pred ccEEEECCC------chHHHHHHHHHhccCCEEEEE
Confidence 999985322 234578888999999999764
No 387
>4dcm_A Ribosomal RNA large subunit methyltransferase G; 23S rRNA (guanine1835-N2)-methyltransferase; HET: SAM; 2.30A {Escherichia coli}
Probab=89.40 E-value=3.2 Score=38.22 Aligned_cols=113 Identities=10% Similarity=0.059 Sum_probs=71.3
Q ss_pred HHHHhccCC-CCCCeEEEEcCccCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHhhhCCCCCCCeEEEEecCCCCCCC
Q 018740 167 ELMKGYLKP-VLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLPFA 245 (351)
Q Consensus 167 ~~l~~~l~~-~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~g~~~~~i~~~~~d~~~lp~~ 245 (351)
+.+++.+.. ..+++||.++.+.|.++..++... ++.+.-|--.....+.++..+ +....++.+.. ....+
T Consensus 27 ~~ll~~~~~~~~~~~~~~~~d~~gal~~~~~~~~----~~~~~ds~~~~~~~~~n~~~~-~~~~~~~~~~~-~~~~~--- 97 (375)
T 4dcm_A 27 EYLLQQLDDTEIRGPVLILNDAFGALSCALAEHK----PYSIGDSYISELATRENLRLN-GIDESSVKFLD-STADY--- 97 (375)
T ss_dssp HHHHHTTTTCCCCSCEEEECCSSSHHHHHTGGGC----CEEEESCHHHHHHHHHHHHHT-TCCGGGSEEEE-TTSCC---
T ss_pred HHHHHhhhhccCCCCEEEECCCCCHHHHhhccCC----ceEEEhHHHHHHHHHHHHHHc-CCCccceEecc-ccccc---
Confidence 445555432 245689999999999998887653 355543555555566677665 33233455543 23333
Q ss_pred CCceeeEEeccccccCCChHHHHHHHHhcccCCcEEEEEeeccC
Q 018740 246 SSSIDAVHAGAAIHCWSSPSTGVAEISRVLRPGGVFVGTTYIVD 289 (351)
Q Consensus 246 ~~~fD~V~~~~vl~h~~d~~~~l~~i~~~LkpgG~li~~~~~~~ 289 (351)
.+.||+|+.... .+.......|..+...|+||+.+++...+..
T Consensus 98 ~~~~~~v~~~lp-k~~~~l~~~L~~l~~~l~~~~~i~~~g~~~~ 140 (375)
T 4dcm_A 98 PQQPGVVLIKVP-KTLALLEQQLRALRKVVTSDTRIIAGAKARD 140 (375)
T ss_dssp CSSCSEEEEECC-SCHHHHHHHHHHHHTTCCTTSEEEEEEEGGG
T ss_pred ccCCCEEEEEcC-CCHHHHHHHHHHHHhhCCCCCEEEEEecccc
Confidence 356999885322 2222334668889999999999988776654
No 388
>1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP}
Probab=89.38 E-value=1.3 Score=40.00 Aligned_cols=96 Identities=15% Similarity=0.108 Sum_probs=62.5
Q ss_pred ccCCCCCCeEEEEcC--ccCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHhhhCCCCCCCeEEEEecCCCCC------
Q 018740 172 YLKPVLGGNIIDASC--GSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLP------ 243 (351)
Q Consensus 172 ~l~~~~~~~vLDiGc--G~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~g~~~~~i~~~~~d~~~lp------ 243 (351)
..+..++.+||-.|+ |.|.....+++.. +.+|+++|.+++.++.+++. .... . .|..+..
T Consensus 140 ~~~~~~g~~vlV~Ga~ggiG~~~~~~a~~~-G~~Vi~~~~~~~~~~~~~~~--------g~~~-~--~d~~~~~~~~~i~ 207 (333)
T 1wly_A 140 THKVKPGDYVLIHAAAGGMGHIMVPWARHL-GATVIGTVSTEEKAETARKL--------GCHH-T--INYSTQDFAEVVR 207 (333)
T ss_dssp TSCCCTTCEEEETTTTSTTHHHHHHHHHHT-TCEEEEEESSHHHHHHHHHH--------TCSE-E--EETTTSCHHHHHH
T ss_pred hhCCCCCCEEEEECCccHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHc--------CCCE-E--EECCCHHHHHHHH
Confidence 445667889999995 5577666666543 24999999999888877653 1111 1 2332211
Q ss_pred --CCCCceeeEEeccccccCCChHHHHHHHHhcccCCcEEEEEee
Q 018740 244 --FASSSIDAVHAGAAIHCWSSPSTGVAEISRVLRPGGVFVGTTY 286 (351)
Q Consensus 244 --~~~~~fD~V~~~~vl~h~~d~~~~l~~i~~~LkpgG~li~~~~ 286 (351)
.....+|+|+.+..- ..++...+.|+++|.++....
T Consensus 208 ~~~~~~~~d~vi~~~g~-------~~~~~~~~~l~~~G~iv~~g~ 245 (333)
T 1wly_A 208 EITGGKGVDVVYDSIGK-------DTLQKSLDCLRPRGMCAAYGH 245 (333)
T ss_dssp HHHTTCCEEEEEECSCT-------TTHHHHHHTEEEEEEEEECCC
T ss_pred HHhCCCCCeEEEECCcH-------HHHHHHHHhhccCCEEEEEec
Confidence 112369999865432 347788899999999887654
No 389
>2h6e_A ADH-4, D-arabinose 1-dehydrogenase; rossman fold, medium chain alcohol dehydrogenase, oxidoreduc; 1.80A {Sulfolobus solfataricus}
Probab=89.28 E-value=0.68 Score=42.06 Aligned_cols=96 Identities=10% Similarity=0.113 Sum_probs=62.4
Q ss_pred CCCCCCeEEEEcCcc-CHHHHHHHHhC-CCCeEEEEeCCHHHHHHHHHHHhhhCCCCCCCeEEEE----ecC-CCCCCCC
Q 018740 174 KPVLGGNIIDASCGS-GLFSRIFAKSG-LFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVR----ADI-SRLPFAS 246 (351)
Q Consensus 174 ~~~~~~~vLDiGcG~-G~~~~~l~~~~-~~~~v~gvD~s~~~~~~a~~~~~~~~g~~~~~i~~~~----~d~-~~lp~~~ 246 (351)
+. ++.+||-+|+|. |.++..+++.. ++.+|+++|.+++-++.+++. | ... ++. .|. ..+. ..
T Consensus 168 ~~-~g~~VlV~GaG~vG~~aiqlak~~~~Ga~Vi~~~~~~~~~~~~~~l-----G--a~~--vi~~~~~~~~~~~~~-~g 236 (344)
T 2h6e_A 168 KF-AEPVVIVNGIGGLAVYTIQILKALMKNITIVGISRSKKHRDFALEL-----G--ADY--VSEMKDAESLINKLT-DG 236 (344)
T ss_dssp TC-SSCEEEEECCSHHHHHHHHHHHHHCTTCEEEEECSCHHHHHHHHHH-----T--CSE--EECHHHHHHHHHHHH-TT
T ss_pred CC-CCCEEEEECCCHHHHHHHHHHHHhcCCCEEEEEeCCHHHHHHHHHh-----C--CCE--EeccccchHHHHHhh-cC
Confidence 45 788999999975 77777776652 134899999999988888763 1 111 111 111 1111 12
Q ss_pred CceeeEEeccccccCCChHHHHHHHHhcccCCcEEEEEee
Q 018740 247 SSIDAVHAGAAIHCWSSPSTGVAEISRVLRPGGVFVGTTY 286 (351)
Q Consensus 247 ~~fD~V~~~~vl~h~~d~~~~l~~i~~~LkpgG~li~~~~ 286 (351)
..+|+|+-.-. . ...++.+.+.|+|+|.++....
T Consensus 237 ~g~D~vid~~g-----~-~~~~~~~~~~l~~~G~iv~~g~ 270 (344)
T 2h6e_A 237 LGASIAIDLVG-----T-EETTYNLGKLLAQEGAIILVGM 270 (344)
T ss_dssp CCEEEEEESSC-----C-HHHHHHHHHHEEEEEEEEECCC
T ss_pred CCccEEEECCC-----C-hHHHHHHHHHhhcCCEEEEeCC
Confidence 36999985432 2 2357888999999999887544
No 390
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=89.20 E-value=3.1 Score=33.67 Aligned_cols=92 Identities=11% Similarity=0.099 Sum_probs=56.7
Q ss_pred CCeEEEEcCcc-CH-HHHHHHHh-CCCCeEEEEeCCHHHHHHHHHHHhhhCCCCCCCeEEEEecCCCCC----C-CCCce
Q 018740 178 GGNIIDASCGS-GL-FSRIFAKS-GLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLP----F-ASSSI 249 (351)
Q Consensus 178 ~~~vLDiGcG~-G~-~~~~l~~~-~~~~~v~gvD~s~~~~~~a~~~~~~~~g~~~~~i~~~~~d~~~lp----~-~~~~f 249 (351)
+.+|+=+|+|. |. ++..|.+. +. +|+++|.+++.++.+++ ..+..+.+|..+.. . .-..+
T Consensus 39 ~~~v~IiG~G~~G~~~a~~L~~~~g~--~V~vid~~~~~~~~~~~----------~g~~~~~gd~~~~~~l~~~~~~~~a 106 (183)
T 3c85_A 39 HAQVLILGMGRIGTGAYDELRARYGK--ISLGIEIREEAAQQHRS----------EGRNVISGDATDPDFWERILDTGHV 106 (183)
T ss_dssp TCSEEEECCSHHHHHHHHHHHHHHCS--CEEEEESCHHHHHHHHH----------TTCCEEECCTTCHHHHHTBCSCCCC
T ss_pred CCcEEEECCCHHHHHHHHHHHhccCC--eEEEEECCHHHHHHHHH----------CCCCEEEcCCCCHHHHHhccCCCCC
Confidence 55899999875 44 34555555 65 89999999987776654 23456677765421 1 13458
Q ss_pred eeEEeccccccCCChH--HHHHHHHhcccCCcEEEEEee
Q 018740 250 DAVHAGAAIHCWSSPS--TGVAEISRVLRPGGVFVGTTY 286 (351)
Q Consensus 250 D~V~~~~vl~h~~d~~--~~l~~i~~~LkpgG~li~~~~ 286 (351)
|+|+..- ++.. ..+....+.+.|++.++....
T Consensus 107 d~vi~~~-----~~~~~~~~~~~~~~~~~~~~~ii~~~~ 140 (183)
T 3c85_A 107 KLVLLAM-----PHHQGNQTALEQLQRRNYKGQIAAIAE 140 (183)
T ss_dssp CEEEECC-----SSHHHHHHHHHHHHHTTCCSEEEEEES
T ss_pred CEEEEeC-----CChHHHHHHHHHHHHHCCCCEEEEEEC
Confidence 8888632 2332 223345566677777776543
No 391
>3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii}
Probab=89.12 E-value=1.4 Score=39.40 Aligned_cols=96 Identities=17% Similarity=0.100 Sum_probs=59.3
Q ss_pred hccCCCCCCeEEEEc-Cc-cCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHhhhCCCCCCCeEEEEecCCC-CCCCCC
Q 018740 171 GYLKPVLGGNIIDAS-CG-SGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISR-LPFASS 247 (351)
Q Consensus 171 ~~l~~~~~~~vLDiG-cG-~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~g~~~~~i~~~~~d~~~-lp~~~~ 247 (351)
...+..++.+||=+| +| .|.++..+++.. ..+|++++ ++.-.+.+++. | .. ..+..+-.+ +.-.-.
T Consensus 146 ~~~~~~~g~~vlV~Ga~G~vG~~a~q~a~~~-Ga~vi~~~-~~~~~~~~~~l-----G--a~--~~i~~~~~~~~~~~~~ 214 (321)
T 3tqh_A 146 NQAEVKQGDVVLIHAGAGGVGHLAIQLAKQK-GTTVITTA-SKRNHAFLKAL-----G--AE--QCINYHEEDFLLAIST 214 (321)
T ss_dssp HHTTCCTTCEEEESSTTSHHHHHHHHHHHHT-TCEEEEEE-CHHHHHHHHHH-----T--CS--EEEETTTSCHHHHCCS
T ss_pred HhcCCCCCCEEEEEcCCcHHHHHHHHHHHHc-CCEEEEEe-ccchHHHHHHc-----C--CC--EEEeCCCcchhhhhcc
Confidence 445667789999997 55 488888887764 34899998 55546666653 1 11 122211111 111114
Q ss_pred ceeeEEeccccccCCChHHHHHHHHhcccCCcEEEEE
Q 018740 248 SIDAVHAGAAIHCWSSPSTGVAEISRVLRPGGVFVGT 284 (351)
Q Consensus 248 ~fD~V~~~~vl~h~~d~~~~l~~i~~~LkpgG~li~~ 284 (351)
.+|+|+-.- ..+ .+....+.|+++|.++..
T Consensus 215 g~D~v~d~~-----g~~--~~~~~~~~l~~~G~iv~~ 244 (321)
T 3tqh_A 215 PVDAVIDLV-----GGD--VGIQSIDCLKETGCIVSV 244 (321)
T ss_dssp CEEEEEESS-----CHH--HHHHHGGGEEEEEEEEEC
T ss_pred CCCEEEECC-----CcH--HHHHHHHhccCCCEEEEe
Confidence 699988432 222 247889999999999875
No 392
>1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D
Probab=89.06 E-value=0.49 Score=42.14 Aligned_cols=92 Identities=17% Similarity=0.071 Sum_probs=59.2
Q ss_pred CCCCCeEEEEcC--ccCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHhhhCCCCCCCeEEEEecCCC-CCCC--CCce
Q 018740 175 PVLGGNIIDASC--GSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISR-LPFA--SSSI 249 (351)
Q Consensus 175 ~~~~~~vLDiGc--G~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~g~~~~~i~~~~~d~~~-lp~~--~~~f 249 (351)
..++.+||-+|+ |.|..+..+++.. +.+|+++|.+++.++.+++. | .. ..+ |..+ ..+. -+.+
T Consensus 123 ~~~g~~vlV~Ga~G~vG~~~~~~a~~~-Ga~Vi~~~~~~~~~~~~~~~-----g--a~--~~~--~~~~~~~~~~~~~~~ 190 (302)
T 1iz0_A 123 ARPGEKVLVQAAAGALGTAAVQVARAM-GLRVLAAASRPEKLALPLAL-----G--AE--EAA--TYAEVPERAKAWGGL 190 (302)
T ss_dssp CCTTCEEEESSTTBHHHHHHHHHHHHT-TCEEEEEESSGGGSHHHHHT-----T--CS--EEE--EGGGHHHHHHHTTSE
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHhc-----C--CC--EEE--ECCcchhHHHHhcCc
Confidence 566889999997 4577777777653 34999999998888777652 1 11 112 2211 0000 0469
Q ss_pred eeEEeccccccCCChHHHHHHHHhcccCCcEEEEEee
Q 018740 250 DAVHAGAAIHCWSSPSTGVAEISRVLRPGGVFVGTTY 286 (351)
Q Consensus 250 D~V~~~~vl~h~~d~~~~l~~i~~~LkpgG~li~~~~ 286 (351)
|+|+. -. . ..++...+.|+++|.++....
T Consensus 191 d~vid-~g-----~--~~~~~~~~~l~~~G~~v~~g~ 219 (302)
T 1iz0_A 191 DLVLE-VR-----G--KEVEESLGLLAHGGRLVYIGA 219 (302)
T ss_dssp EEEEE-CS-----C--TTHHHHHTTEEEEEEEEEC--
T ss_pred eEEEE-CC-----H--HHHHHHHHhhccCCEEEEEeC
Confidence 99986 32 2 247888899999999887543
No 393
>2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A*
Probab=89.04 E-value=1.9 Score=39.47 Aligned_cols=87 Identities=14% Similarity=0.136 Sum_probs=57.2
Q ss_pred CCeEEEEcCcc-CHHHHHHHHh-CCCCeEEEEeCCH---HHHHHHHHHHhhhCCCCCCCeEEEEecCCCCCCC------C
Q 018740 178 GGNIIDASCGS-GLFSRIFAKS-GLFSLVVALDYSE---NMLKQCYEFVQQESNFPKENFLLVRADISRLPFA------S 246 (351)
Q Consensus 178 ~~~vLDiGcG~-G~~~~~l~~~-~~~~~v~gvD~s~---~~~~~a~~~~~~~~g~~~~~i~~~~~d~~~lp~~------~ 246 (351)
+.+||-+|+|. |..+..+++. |. +|+++|.++ +-++.+++. ....+ | .+ .+. .
T Consensus 181 g~~VlV~GaG~vG~~~~q~a~~~Ga--~Vi~~~~~~~~~~~~~~~~~~----------ga~~v--~-~~-~~~~~~~~~~ 244 (366)
T 2cdc_A 181 CRKVLVVGTGPIGVLFTLLFRTYGL--EVWMANRREPTEVEQTVIEET----------KTNYY--N-SS-NGYDKLKDSV 244 (366)
T ss_dssp TCEEEEESCHHHHHHHHHHHHHHTC--EEEEEESSCCCHHHHHHHHHH----------TCEEE--E-CT-TCSHHHHHHH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCC--EEEEEeCCccchHHHHHHHHh----------CCcee--c-hH-HHHHHHHHhC
Confidence 78999999853 6666666554 54 999999988 777777653 11222 3 22 111 1
Q ss_pred CceeeEEeccccccCCChHHHH-HHHHhcccCCcEEEEEee
Q 018740 247 SSIDAVHAGAAIHCWSSPSTGV-AEISRVLRPGGVFVGTTY 286 (351)
Q Consensus 247 ~~fD~V~~~~vl~h~~d~~~~l-~~i~~~LkpgG~li~~~~ 286 (351)
+.+|+|+.+-.. + ..+ +.+.+.|+++|.++....
T Consensus 245 ~~~d~vid~~g~-----~-~~~~~~~~~~l~~~G~iv~~g~ 279 (366)
T 2cdc_A 245 GKFDVIIDATGA-----D-VNILGNVIPLLGRNGVLGLFGF 279 (366)
T ss_dssp CCEEEEEECCCC-----C-THHHHHHGGGEEEEEEEEECSC
T ss_pred CCCCEEEECCCC-----h-HHHHHHHHHHHhcCCEEEEEec
Confidence 469999854432 2 135 888999999999887644
No 394
>1vq8_Z 50S ribosomal protein L37AE; ribosome 50S, protein-protein complex, RNA-RNA complex, PROT complex, peptidyl transferase reaction; HET: 1MA OMU OMG UR3 PSU SPS; 2.20A {Haloarcula marismortui} SCOP: g.41.8.1 PDB: 1vq4_Z* 1vq6_Z* 1vq5_Z* 1vq7_Z* 1vq9_Z* 1vqk_Z* 1vql_Z* 1vqm_Z* 1vqn_Z* 1vqo_Z* 1vqp_Z* 1yhq_Z* 1yi2_Z* 1yij_Z* 1yit_Z* 1yj9_Z* 1yjn_Z* 1yjw_Z* 2qa4_Z* 1s72_Z* ...
Probab=88.99 E-value=0.12 Score=36.81 Aligned_cols=31 Identities=23% Similarity=0.422 Sum_probs=23.5
Q ss_pred CceeCCCCCCCcccccCCCcccccccCCcccccccccccc
Q 018740 70 NVLACPICYKPLTWIGDSSLSIESAAGSSLQCNTCKKTYS 109 (351)
Q Consensus 70 ~~l~CP~C~~~l~~~~~~~~~~~~~~~~~~~C~~C~~~~~ 109 (351)
..+.||.||....... ..+.+.|+.|+..+.
T Consensus 26 ~~y~Cp~CG~~~v~r~---------atGiW~C~~Cg~~~a 56 (83)
T 1vq8_Z 26 EDHACPNCGEDRVDRQ---------GTGIWQCSYCDYKFT 56 (83)
T ss_dssp SCEECSSSCCEEEEEE---------ETTEEEETTTCCEEE
T ss_pred ccCcCCCCCCcceecc---------CCCeEECCCCCCEec
Confidence 4589999999665442 357899999998764
No 395
>2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A*
Probab=88.65 E-value=0.39 Score=43.98 Aligned_cols=98 Identities=15% Similarity=0.126 Sum_probs=58.9
Q ss_pred CCC-CCCeEEEEcCcc-CHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHhhhCCCCCCCeEEEEe-cCCCCCCCCCcee
Q 018740 174 KPV-LGGNIIDASCGS-GLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRA-DISRLPFASSSID 250 (351)
Q Consensus 174 ~~~-~~~~vLDiGcG~-G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~g~~~~~i~~~~~-d~~~lp~~~~~fD 250 (351)
... ++.+||-+|+|. |.++..+++.. ..+|+++|.+++-++.+++.+ | ...+ +.. +...+.-..+.+|
T Consensus 176 ~~~~~g~~VlV~GaG~vG~~a~qlak~~-Ga~Vi~~~~~~~~~~~~~~~l----G--a~~v--i~~~~~~~~~~~~~g~D 246 (357)
T 2cf5_A 176 GLKQPGLRGGILGLGGVGHMGVKIAKAM-GHHVTVISSSNKKREEALQDL----G--ADDY--VIGSDQAKMSELADSLD 246 (357)
T ss_dssp STTSTTCEEEEECCSHHHHHHHHHHHHH-TCEEEEEESSTTHHHHHHTTS----C--CSCE--EETTCHHHHHHSTTTEE
T ss_pred CCCCCCCEEEEECCCHHHHHHHHHHHHC-CCeEEEEeCChHHHHHHHHHc----C--Ccee--eccccHHHHHHhcCCCC
Confidence 445 688999999864 67777776653 249999999988777766321 1 1111 111 1000100123699
Q ss_pred eEEeccccccCCChHHHHHHHHhcccCCcEEEEEee
Q 018740 251 AVHAGAAIHCWSSPSTGVAEISRVLRPGGVFVGTTY 286 (351)
Q Consensus 251 ~V~~~~vl~h~~d~~~~l~~i~~~LkpgG~li~~~~ 286 (351)
+|+-.-.-. ..++...+.|+++|.++....
T Consensus 247 ~vid~~g~~------~~~~~~~~~l~~~G~iv~~G~ 276 (357)
T 2cf5_A 247 YVIDTVPVH------HALEPYLSLLKLDGKLILMGV 276 (357)
T ss_dssp EEEECCCSC------CCSHHHHTTEEEEEEEEECSC
T ss_pred EEEECCCCh------HHHHHHHHHhccCCEEEEeCC
Confidence 998543311 125667789999999887543
No 396
>3h0g_L DNA-directed RNA polymerases I, II, and III subunit rpabc4; transcription, multi-protein complex, DNA- binding, magnesium; 3.65A {Schizosaccharomyces pombe}
Probab=88.37 E-value=0.36 Score=32.25 Aligned_cols=34 Identities=15% Similarity=0.295 Sum_probs=24.6
Q ss_pred cCCCceeCCCCCCCcccccCCCcccccccCCccccccccccccc
Q 018740 67 TSKNVLACPICYKPLTWIGDSSLSIESAAGSSLQCNTCKKTYSG 110 (351)
Q Consensus 67 ~~~~~l~CP~C~~~l~~~~~~~~~~~~~~~~~~~C~~C~~~~~~ 110 (351)
.....+.|..|+....... ...++|+.||+....
T Consensus 17 ~~~v~Y~C~~Cg~~~~l~~----------~~~iRC~~CG~RILy 50 (63)
T 3h0g_L 17 PATMIYLCADCGARNTIQA----------KEVIRCRECGHRVMY 50 (63)
T ss_dssp --CCCCBCSSSCCBCCCCS----------SSCCCCSSSCCCCCB
T ss_pred CCCeEEECCCCCCeeecCC----------CCceECCCCCcEEEE
Confidence 3356799999999776543 367999999986554
No 397
>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0
Probab=88.24 E-value=3.9 Score=35.59 Aligned_cols=104 Identities=15% Similarity=0.121 Sum_probs=68.6
Q ss_pred CCCeEEEEcCccCH---HHHHHHHhCCCCeEEEEeCC------------HHHHHHHHHHHhhhCCCCCCCeEEEEecCCC
Q 018740 177 LGGNIIDASCGSGL---FSRIFAKSGLFSLVVALDYS------------ENMLKQCYEFVQQESNFPKENFLLVRADISR 241 (351)
Q Consensus 177 ~~~~vLDiGcG~G~---~~~~l~~~~~~~~v~gvD~s------------~~~~~~a~~~~~~~~g~~~~~i~~~~~d~~~ 241 (351)
.++++|=.|++.|. .+..|++.|. +|+.+|.+ ...++.+...+... ..++.++.+|+.+
T Consensus 9 ~gk~vlVTGas~gIG~~ia~~l~~~G~--~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~D~~~ 82 (287)
T 3pxx_A 9 QDKVVLVTGGARGQGRSHAVKLAEEGA--DIILFDICHDIETNEYPLATSRDLEEAGLEVEKT----GRKAYTAEVDVRD 82 (287)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTC--EEEEEECCSCCTTSCSCCCCHHHHHHHHHHHHHT----TSCEEEEECCTTC
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCC--eEEEEcccccccccccchhhhHHHHHHHHHHHhc----CCceEEEEccCCC
Confidence 46789999986653 4566667776 99999987 66666665555544 5688999999976
Q ss_pred CCC----------CCCceeeEEeccccccCC---Ch--------------HHHHHHHHhcccCCcEEEEEee
Q 018740 242 LPF----------ASSSIDAVHAGAAIHCWS---SP--------------STGVAEISRVLRPGGVFVGTTY 286 (351)
Q Consensus 242 lp~----------~~~~fD~V~~~~vl~h~~---d~--------------~~~l~~i~~~LkpgG~li~~~~ 286 (351)
..- .-+..|+++.+..+.... +. ..+++.+.+.++.+|.++....
T Consensus 83 ~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS 154 (287)
T 3pxx_A 83 RAAVSRELANAVAEFGKLDVVVANAGICPLGAHLPVQAFADAFDVDFVGVINTVHAALPYLTSGASIITTGS 154 (287)
T ss_dssp HHHHHHHHHHHHHHHSCCCEEEECCCCCCCCTTCCTHHHHHHHHHHTHHHHHHHHHHGGGCCTTCEEEEECC
T ss_pred HHHHHHHHHHHHHHcCCCCEEEECCCcCcccCcCCHHHHHHHhhhhhhhhHHHHHHHHHHhhcCcEEEEecc
Confidence 420 013689999876553321 11 1345666777778888776543
No 398
>2jrp_A Putative cytoplasmic protein; two-zinc binding protein, structural genomics, PSI-2, protein structure initiative; NMR {Salmonella typhimurium LT2}
Probab=88.22 E-value=0.21 Score=35.21 Aligned_cols=27 Identities=37% Similarity=0.992 Sum_probs=16.7
Q ss_pred eeCCCCCCCcccccCCCcccccccCCcccccccccccc
Q 018740 72 LACPICYKPLTWIGDSSLSIESAAGSSLQCNTCKKTYS 109 (351)
Q Consensus 72 l~CP~C~~~l~~~~~~~~~~~~~~~~~~~C~~C~~~~~ 109 (351)
..||.|++++.+.+ +...|..|+..|.
T Consensus 3 ~~CP~C~~~l~~~~-----------~~~~C~~C~~~~~ 29 (81)
T 2jrp_A 3 ITCPVCHHALERNG-----------DTAHCETCAKDFS 29 (81)
T ss_dssp CCCSSSCSCCEECS-----------SEEECTTTCCEEE
T ss_pred CCCCCCCCccccCC-----------CceECccccccCC
Confidence 56888888776654 3445666655443
No 399
>1qyp_A RNA polymerase II; transcription, RPB9, Zn ribbon, hyperthermophilic, extremophIle; NMR {Thermococcus celer} SCOP: g.41.3.1
Probab=88.14 E-value=0.15 Score=33.48 Aligned_cols=39 Identities=18% Similarity=0.513 Sum_probs=23.0
Q ss_pred ceeCCCCCCCcc-cccCCCcccccccCCcccccccccccc
Q 018740 71 VLACPICYKPLT-WIGDSSLSIESAAGSSLQCNTCKKTYS 109 (351)
Q Consensus 71 ~l~CP~C~~~l~-~~~~~~~~~~~~~~~~~~C~~C~~~~~ 109 (351)
...||.|+..-. .......+.++.+...+.|.+|++.+.
T Consensus 15 ~~~Cp~Cg~~~~~~~q~Q~rsadep~T~fy~C~~Cg~~w~ 54 (57)
T 1qyp_A 15 KITCPKCGNDTAYWWEMQTRAGDEPSTIFYKCTKCGHTWR 54 (57)
T ss_dssp ECCCTTTCCSEEEEEEECCSSSSCSSEEEEEESSSCCEEE
T ss_pred EeECCCCCCCEEEEEEeecccCCCCCcEEEEcCCCCCEec
Confidence 477999998321 111111223334445789999998754
No 400
>3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans}
Probab=88.12 E-value=2.3 Score=38.56 Aligned_cols=95 Identities=13% Similarity=0.010 Sum_probs=62.5
Q ss_pred hccCCCCCCeEEEEcC-c-cCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHhhhCCCCCCCeEEEEecCCCCC-----
Q 018740 171 GYLKPVLGGNIIDASC-G-SGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLP----- 243 (351)
Q Consensus 171 ~~l~~~~~~~vLDiGc-G-~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~g~~~~~i~~~~~d~~~lp----- 243 (351)
......++.+||-+|+ | .|.++..+++.. ..+|+++ .++.-++.+++. | ...+. +-.++.
T Consensus 144 ~~~~~~~g~~VlV~Ga~g~iG~~~~q~a~~~-Ga~Vi~~-~~~~~~~~~~~l-----G-----a~~i~-~~~~~~~~~~~ 210 (343)
T 3gaz_A 144 DRAQVQDGQTVLIQGGGGGVGHVAIQIALAR-GARVFAT-ARGSDLEYVRDL-----G-----ATPID-ASREPEDYAAE 210 (343)
T ss_dssp TTTCCCTTCEEEEETTTSHHHHHHHHHHHHT-TCEEEEE-ECHHHHHHHHHH-----T-----SEEEE-TTSCHHHHHHH
T ss_pred HhcCCCCCCEEEEecCCCHHHHHHHHHHHHC-CCEEEEE-eCHHHHHHHHHc-----C-----CCEec-cCCCHHHHHHH
Confidence 4456677899999994 3 477777777763 3499999 888888777653 1 11222 222211
Q ss_pred -CCCCceeeEEeccccccCCChHHHHHHHHhcccCCcEEEEEe
Q 018740 244 -FASSSIDAVHAGAAIHCWSSPSTGVAEISRVLRPGGVFVGTT 285 (351)
Q Consensus 244 -~~~~~fD~V~~~~vl~h~~d~~~~l~~i~~~LkpgG~li~~~ 285 (351)
.....+|+|+-+-. . ..+....+.|+++|.++...
T Consensus 211 ~~~~~g~D~vid~~g-----~--~~~~~~~~~l~~~G~iv~~g 246 (343)
T 3gaz_A 211 HTAGQGFDLVYDTLG-----G--PVLDASFSAVKRFGHVVSCL 246 (343)
T ss_dssp HHTTSCEEEEEESSC-----T--HHHHHHHHHEEEEEEEEESC
T ss_pred HhcCCCceEEEECCC-----c--HHHHHHHHHHhcCCeEEEEc
Confidence 12346999985332 2 46788889999999988753
No 401
>2j6a_A Protein TRM112; translation termination, methyltransferase, transferase, ERF1, nuclear protein, protein methylation; 1.7A {Saccharomyces cerevisiae}
Probab=87.95 E-value=0.11 Score=40.76 Aligned_cols=28 Identities=14% Similarity=0.294 Sum_probs=24.7
Q ss_pred ccCCccccccccccccccCceeeecccC
Q 018740 94 AAGSSLQCNTCKKTYSGVGTHFDMTAAS 121 (351)
Q Consensus 94 ~~~~~~~C~~C~~~~~~~~g~~~~~~~~ 121 (351)
+..+.+.|+.|+..|++++|+++++...
T Consensus 105 v~eg~L~C~~cg~~YPI~dGIP~mL~~e 132 (141)
T 2j6a_A 105 IAEGEMKCRNCGHIYYIKNGIPNLLLPP 132 (141)
T ss_dssp EEEEEEECTTTCCEEEEETTEESSCCCS
T ss_pred ccCCEEECCCCCCcccccCCccCcCCcH
Confidence 4568899999999999999999998753
No 402
>2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A*
Probab=87.89 E-value=0.74 Score=41.82 Aligned_cols=95 Identities=13% Similarity=0.131 Sum_probs=61.7
Q ss_pred ccCCCCCCeEEEEcCcc-CHHHHHHHHhCCCC-eEEEEeCCHHHHHHHHHHHhhhCCCCCCCeEEEEecCCCCCC-----
Q 018740 172 YLKPVLGGNIIDASCGS-GLFSRIFAKSGLFS-LVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLPF----- 244 (351)
Q Consensus 172 ~l~~~~~~~vLDiGcG~-G~~~~~l~~~~~~~-~v~gvD~s~~~~~~a~~~~~~~~g~~~~~i~~~~~d~~~lp~----- 244 (351)
..+. ++.+||-+|+|. |.++..+++.. +. +|+++|.+++-++.+++. .. .. .|..+..+
T Consensus 160 ~~~~-~g~~VlV~GaG~vG~~~~q~a~~~-Ga~~Vi~~~~~~~~~~~~~~l-a~---------~v--~~~~~~~~~~~~~ 225 (343)
T 2dq4_A 160 GSGV-SGKSVLITGAGPIGLMAAMVVRAS-GAGPILVSDPNPYRLAFARPY-AD---------RL--VNPLEEDLLEVVR 225 (343)
T ss_dssp TTCC-TTSCEEEECCSHHHHHHHHHHHHT-TCCSEEEECSCHHHHGGGTTT-CS---------EE--ECTTTSCHHHHHH
T ss_pred hCCC-CCCEEEEECCCHHHHHHHHHHHHc-CCCEEEEECCCHHHHHHHHHh-HH---------hc--cCcCccCHHHHHH
Confidence 4455 788999999864 77777777764 34 899999998877766542 11 11 12221110
Q ss_pred --CCCceeeEEeccccccCCChHHHHHHHHhcccCCcEEEEEee
Q 018740 245 --ASSSIDAVHAGAAIHCWSSPSTGVAEISRVLRPGGVFVGTTY 286 (351)
Q Consensus 245 --~~~~fD~V~~~~vl~h~~d~~~~l~~i~~~LkpgG~li~~~~ 286 (351)
....+|+|+..-. . ...++...+.|+++|.++....
T Consensus 226 ~~~~~g~D~vid~~g-----~-~~~~~~~~~~l~~~G~iv~~g~ 263 (343)
T 2dq4_A 226 RVTGSGVEVLLEFSG-----N-EAAIHQGLMALIPGGEARILGI 263 (343)
T ss_dssp HHHSSCEEEEEECSC-----C-HHHHHHHHHHEEEEEEEEECCC
T ss_pred HhcCCCCCEEEECCC-----C-HHHHHHHHHHHhcCCEEEEEec
Confidence 0236999984332 2 2457888999999999887543
No 403
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=87.70 E-value=1.9 Score=33.19 Aligned_cols=91 Identities=18% Similarity=0.152 Sum_probs=55.4
Q ss_pred CCeEEEEcCcc-CH-HHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHhhhCCCCCCCeEEEEecCCCCC----CCCCceee
Q 018740 178 GGNIIDASCGS-GL-FSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLP----FASSSIDA 251 (351)
Q Consensus 178 ~~~vLDiGcG~-G~-~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~g~~~~~i~~~~~d~~~lp----~~~~~fD~ 251 (351)
..+|+=+|+|. |. +...|.+.+. +|+++|.+++.++.+++ ..+.++.+|..+.. ..-..+|+
T Consensus 6 ~~~v~I~G~G~iG~~la~~L~~~g~--~V~~id~~~~~~~~~~~----------~~~~~~~gd~~~~~~l~~~~~~~~d~ 73 (141)
T 3llv_A 6 RYEYIVIGSEAAGVGLVRELTAAGK--KVLAVDKSKEKIELLED----------EGFDAVIADPTDESFYRSLDLEGVSA 73 (141)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTC--CEEEEESCHHHHHHHHH----------TTCEEEECCTTCHHHHHHSCCTTCSE
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCC--eEEEEECCHHHHHHHHH----------CCCcEEECCCCCHHHHHhCCcccCCE
Confidence 34799999865 33 3444455565 89999999988777664 24667888886532 12246888
Q ss_pred EEeccccccCCChH--HHHHHHHhcccCCcEEEEEee
Q 018740 252 VHAGAAIHCWSSPS--TGVAEISRVLRPGGVFVGTTY 286 (351)
Q Consensus 252 V~~~~vl~h~~d~~--~~l~~i~~~LkpgG~li~~~~ 286 (351)
|+..-. +.. ..+....+.+. ...++....
T Consensus 74 vi~~~~-----~~~~n~~~~~~a~~~~-~~~iia~~~ 104 (141)
T 3llv_A 74 VLITGS-----DDEFNLKILKALRSVS-DVYAIVRVS 104 (141)
T ss_dssp EEECCS-----CHHHHHHHHHHHHHHC-CCCEEEEES
T ss_pred EEEecC-----CHHHHHHHHHHHHHhC-CceEEEEEc
Confidence 875332 322 33444445555 555555433
No 404
>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A*
Probab=87.62 E-value=0.7 Score=42.46 Aligned_cols=96 Identities=15% Similarity=0.093 Sum_probs=58.9
Q ss_pred CCC-CCCeEEEEcCcc-CHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHhhhCCCCCCCeEEEEecCCC---CCCCCCc
Q 018740 174 KPV-LGGNIIDASCGS-GLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISR---LPFASSS 248 (351)
Q Consensus 174 ~~~-~~~~vLDiGcG~-G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~g~~~~~i~~~~~d~~~---lp~~~~~ 248 (351)
... ++.+||-+|+|. |.++..+++.. ..+|+++|.+++.++.+++.+. .. ..+ |..+ +.-..+.
T Consensus 183 ~~~~~g~~VlV~GaG~vG~~~~q~a~~~-Ga~Vi~~~~~~~~~~~~~~~lG------a~--~v~--~~~~~~~~~~~~~~ 251 (366)
T 1yqd_A 183 GLDEPGKHIGIVGLGGLGHVAVKFAKAF-GSKVTVISTSPSKKEEALKNFG------AD--SFL--VSRDQEQMQAAAGT 251 (366)
T ss_dssp TCCCTTCEEEEECCSHHHHHHHHHHHHT-TCEEEEEESCGGGHHHHHHTSC------CS--EEE--ETTCHHHHHHTTTC
T ss_pred CcCCCCCEEEEECCCHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHhcC------Cc--eEE--eccCHHHHHHhhCC
Confidence 444 688999999864 66777776653 3499999999887777664221 11 111 2211 1001136
Q ss_pred eeeEEeccccccCCChHHHHHHHHhcccCCcEEEEEee
Q 018740 249 IDAVHAGAAIHCWSSPSTGVAEISRVLRPGGVFVGTTY 286 (351)
Q Consensus 249 fD~V~~~~vl~h~~d~~~~l~~i~~~LkpgG~li~~~~ 286 (351)
+|+|+..-.... .++...+.|+++|.++....
T Consensus 252 ~D~vid~~g~~~------~~~~~~~~l~~~G~iv~~g~ 283 (366)
T 1yqd_A 252 LDGIIDTVSAVH------PLLPLFGLLKSHGKLILVGA 283 (366)
T ss_dssp EEEEEECCSSCC------CSHHHHHHEEEEEEEEECCC
T ss_pred CCEEEECCCcHH------HHHHHHHHHhcCCEEEEEcc
Confidence 999985433211 24566788999999887543
No 405
>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}
Probab=87.48 E-value=9.8 Score=32.79 Aligned_cols=70 Identities=9% Similarity=0.137 Sum_probs=49.8
Q ss_pred CeEEEEcCccCHHHHHHHH----hCCCCeEEEEeCCHHHHHHHHHHHhhhCCCCCCCeEEEEecCCCCCCCCCceeeEEe
Q 018740 179 GNIIDASCGSGLFSRIFAK----SGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLPFASSSIDAVHA 254 (351)
Q Consensus 179 ~~vLDiGcG~G~~~~~l~~----~~~~~~v~gvD~s~~~~~~a~~~~~~~~g~~~~~i~~~~~d~~~lp~~~~~fD~V~~ 254 (351)
.+||=.|+ |..+..+++ .+. +|++++-++........ .+++++.+|+.++. -..+|+|+.
T Consensus 6 ~~ilVtGa--G~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~~~----------~~~~~~~~D~~d~~--~~~~d~vi~ 69 (286)
T 3ius_A 6 GTLLSFGH--GYTARVLSRALAPQGW--RIIGTSRNPDQMEAIRA----------SGAEPLLWPGEEPS--LDGVTHLLI 69 (286)
T ss_dssp CEEEEETC--CHHHHHHHHHHGGGTC--EEEEEESCGGGHHHHHH----------TTEEEEESSSSCCC--CTTCCEEEE
T ss_pred CcEEEECC--cHHHHHHHHHHHHCCC--EEEEEEcChhhhhhHhh----------CCCeEEEecccccc--cCCCCEEEE
Confidence 48999995 776666554 455 99999998865544332 46899999998866 457899998
Q ss_pred ccccccCCCh
Q 018740 255 GAAIHCWSSP 264 (351)
Q Consensus 255 ~~vl~h~~d~ 264 (351)
........++
T Consensus 70 ~a~~~~~~~~ 79 (286)
T 3ius_A 70 STAPDSGGDP 79 (286)
T ss_dssp CCCCBTTBCH
T ss_pred CCCccccccH
Confidence 7765544344
No 406
>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444}
Probab=87.47 E-value=6 Score=35.34 Aligned_cols=79 Identities=13% Similarity=0.219 Sum_probs=55.8
Q ss_pred CCCeEEEEcCccCH---HHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHhhhCCCCCCCeEEEEecCCCCC-----C----
Q 018740 177 LGGNIIDASCGSGL---FSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLP-----F---- 244 (351)
Q Consensus 177 ~~~~vLDiGcG~G~---~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~g~~~~~i~~~~~d~~~lp-----~---- 244 (351)
.+++||=.|++.|. ++..|++.|. +|++++.++..++.+.+.+... + ...++.++.+|+.+.. +
T Consensus 7 ~~k~vlVTGas~gIG~~la~~l~~~G~--~Vv~~~r~~~~~~~~~~~l~~~-~-~~~~~~~~~~Dl~~~~~v~~~~~~~~ 82 (319)
T 3ioy_A 7 AGRTAFVTGGANGVGIGLVRQLLNQGC--KVAIADIRQDSIDKALATLEAE-G-SGPEVMGVQLDVASREGFKMAADEVE 82 (319)
T ss_dssp TTCEEEEETTTSTHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHHHH-T-CGGGEEEEECCTTCHHHHHHHHHHHH
T ss_pred CCCEEEEcCCchHHHHHHHHHHHHCCC--EEEEEECCHHHHHHHHHHHHhc-C-CCCeEEEEECCCCCHHHHHHHHHHHH
Confidence 46689999987663 5566666776 9999999998887777766554 1 1237899999997642 0
Q ss_pred -CCCceeeEEeccccc
Q 018740 245 -ASSSIDAVHAGAAIH 259 (351)
Q Consensus 245 -~~~~fD~V~~~~vl~ 259 (351)
..+..|+++.+..+.
T Consensus 83 ~~~g~id~lv~nAg~~ 98 (319)
T 3ioy_A 83 ARFGPVSILCNNAGVN 98 (319)
T ss_dssp HHTCCEEEEEECCCCC
T ss_pred HhCCCCCEEEECCCcC
Confidence 124689999877653
No 407
>1twf_L ABC10-alpha, DNA-directed RNA polymerases I, II, and III 7.7 K polypeptide; transcription, mRNA, multiprotein complex; HET: UTP; 2.30A {Saccharomyces cerevisiae} SCOP: g.41.9.2 PDB: 1i3q_L 1i6h_L 1k83_L* 1nik_L 1nt9_L 1pqv_L 1r5u_L 1r9s_L* 1r9t_L* 1sfo_L* 1twa_L* 1twc_L* 1i50_L* 1twg_L* 1twh_L* 1wcm_L 1y1v_L 1y1w_L 1y1y_L 1y77_L* ...
Probab=87.46 E-value=0.32 Score=33.37 Aligned_cols=29 Identities=17% Similarity=0.480 Sum_probs=22.0
Q ss_pred CCceeCCCCCCCcccccCCCcccccccCCcccccccccc
Q 018740 69 KNVLACPICYKPLTWIGDSSLSIESAAGSSLQCNTCKKT 107 (351)
Q Consensus 69 ~~~l~CP~C~~~l~~~~~~~~~~~~~~~~~~~C~~C~~~ 107 (351)
...+.|+.||..+.... ....+|+.||+.
T Consensus 26 ~v~Y~C~~CG~~~e~~~----------~d~irCp~CG~R 54 (70)
T 1twf_L 26 TLKYICAECSSKLSLSR----------TDAVRCKDCGHR 54 (70)
T ss_dssp CCCEECSSSCCEECCCT----------TSTTCCSSSCCC
T ss_pred eEEEECCCCCCcceeCC----------CCCccCCCCCce
Confidence 45689999999765543 356799999983
No 408
>3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A*
Probab=87.39 E-value=5.3 Score=35.17 Aligned_cols=104 Identities=12% Similarity=0.172 Sum_probs=67.5
Q ss_pred CCCeEEEEcCcc----C-HHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHhhhCCCCCCCeEEEEecCCCCC-----C--
Q 018740 177 LGGNIIDASCGS----G-LFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLP-----F-- 244 (351)
Q Consensus 177 ~~~~vLDiGcG~----G-~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~g~~~~~i~~~~~d~~~lp-----~-- 244 (351)
.++++|=.|++. | .++..|++.|. +|+.++.++...+.+.+..... .++.++.+|+.+.. +
T Consensus 30 ~gk~~lVTGasg~~GIG~aia~~la~~G~--~V~~~~r~~~~~~~~~~~~~~~-----~~~~~~~~Dv~d~~~v~~~~~~ 102 (293)
T 3grk_A 30 QGKRGLILGVANNRSIAWGIAKAAREAGA--ELAFTYQGDALKKRVEPLAEEL-----GAFVAGHCDVADAASIDAVFET 102 (293)
T ss_dssp TTCEEEEECCCSSSSHHHHHHHHHHHTTC--EEEEEECSHHHHHHHHHHHHHH-----TCEEEEECCTTCHHHHHHHHHH
T ss_pred CCCEEEEEcCCCCCcHHHHHHHHHHHCCC--EEEEEcCCHHHHHHHHHHHHhc-----CCceEEECCCCCHHHHHHHHHH
Confidence 467899999763 3 25667777776 8999999876555555444433 46888999997642 0
Q ss_pred ---CCCceeeEEecccccc-------C--CCh--------------HHHHHHHHhcccCCcEEEEEeec
Q 018740 245 ---ASSSIDAVHAGAAIHC-------W--SSP--------------STGVAEISRVLRPGGVFVGTTYI 287 (351)
Q Consensus 245 ---~~~~fD~V~~~~vl~h-------~--~d~--------------~~~l~~i~~~LkpgG~li~~~~~ 287 (351)
.-+..|+++.+..+.. + .++ ..+++.+.+.++.+|.++.....
T Consensus 103 ~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~Iv~isS~ 171 (293)
T 3grk_A 103 LEKKWGKLDFLVHAIGFSDKDELTGRYIDTSEANFTNTMLISVYSLTAVSRRAEKLMADGGSILTLTYY 171 (293)
T ss_dssp HHHHTSCCSEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTTTCEEEEEEECG
T ss_pred HHHhcCCCCEEEECCccCCcccccccccccCHHHHHHHHHHHHHHHHHHHHHHHHhccCCCEEEEEeeh
Confidence 1247899998765432 1 111 13456666777788888776543
No 409
>3ubt_Y Modification methylase HAEIII; protein-DNA complex, DNA cytosine-5 methyltransferase, DNA B S-adenosyl methionine binding; HET: ATP 2PE; 2.50A {Haemophilus aegyptius} PDB: 1dct_A*
Probab=87.13 E-value=0.91 Score=40.93 Aligned_cols=124 Identities=19% Similarity=0.232 Sum_probs=77.7
Q ss_pred eEEEEcCccCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHhhhCCCCCCCeEEEEecCCCCCCC-CCceeeEEecccc
Q 018740 180 NIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLPFA-SSSIDAVHAGAAI 258 (351)
Q Consensus 180 ~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~g~~~~~i~~~~~d~~~lp~~-~~~fD~V~~~~vl 258 (351)
+|||+=||.|.+...+.+.|. .-+.++|+++.+++.-+.+. + -.++.+|+.++... -...|+++...-.
T Consensus 2 kvidLFsG~GG~~~G~~~aG~-~~v~a~e~d~~a~~ty~~N~--------~-~~~~~~DI~~i~~~~~~~~D~l~ggpPC 71 (331)
T 3ubt_Y 2 NLISLFSGAGGLDLGFQKAGF-RIICANEYDKSIWKTYESNH--------S-AKLIKGDISKISSDEFPKCDGIIGGPPS 71 (331)
T ss_dssp EEEEESCTTCHHHHHHHHTTC-EEEEEEECCTTTHHHHHHHC--------C-SEEEESCGGGCCGGGSCCCSEEECCCCG
T ss_pred eEEEeCcCccHHHHHHHHCCC-EEEEEEeCCHHHHHHHHHHC--------C-CCcccCChhhCCHhhCCcccEEEecCCC
Confidence 699999999999999999885 35679999999888877752 2 25778999876422 2468999864322
Q ss_pred c---------cCCChH-HHHHH---HHhcccCCcEEEEEeeccCCCCCcchHHHHHHHHHhhccCCccCCCHHHHHHHHH
Q 018740 259 H---------CWSSPS-TGVAE---ISRVLRPGGVFVGTTYIVDGPFNLIPFSRLLRQNMMQISGSYTFLSEREIEDLCR 325 (351)
Q Consensus 259 ~---------h~~d~~-~~l~~---i~~~LkpgG~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~~ll~ 325 (351)
+ -+.|+. .++.+ +.+.++|. +++.+.... .. . +...-..+.+.+.|+
T Consensus 72 Q~fS~ag~~~g~~d~R~~L~~~~~r~i~~~~Pk--~~~~ENV~g----l~-----------~---~~~~~~~~~i~~~l~ 131 (331)
T 3ubt_Y 72 QSWSEGGSLRGIDDPRGKLFYEYIRILKQKKPI--FFLAENVKG----MM-----------A---QRHNKAVQEFIQEFD 131 (331)
T ss_dssp GGTEETTEECCTTCGGGHHHHHHHHHHHHHCCS--EEEEEECCG----GG-----------G---CTTSHHHHHHHHHHH
T ss_pred CCcCCCCCccCCCCchhHHHHHHHHHHhccCCe--EEEeeeecc----cc-----------c---ccccchhhhhhhhhc
Confidence 1 234554 34433 44556784 333333221 00 0 111112356777888
Q ss_pred HCCCeEEE
Q 018740 326 ACGLVDFK 333 (351)
Q Consensus 326 ~aGf~~v~ 333 (351)
+.|+.+..
T Consensus 132 ~~GY~v~~ 139 (331)
T 3ubt_Y 132 NAGYDVHI 139 (331)
T ss_dssp HHTEEEEE
T ss_pred cCCcEEEE
Confidence 89997654
No 410
>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A
Probab=86.86 E-value=4.2 Score=34.93 Aligned_cols=102 Identities=23% Similarity=0.258 Sum_probs=67.2
Q ss_pred CCCeEEEEcCccCH---HHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHhhhCCCCCCCeEEEEecCCCCCC---------
Q 018740 177 LGGNIIDASCGSGL---FSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLPF--------- 244 (351)
Q Consensus 177 ~~~~vLDiGcG~G~---~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~g~~~~~i~~~~~d~~~lp~--------- 244 (351)
.++++|=.|++.|. .+..|++.|. +|+.+|.++..++...+.+ ..++.++.+|+.+..-
T Consensus 7 ~gk~~lVTGas~gIG~a~a~~l~~~G~--~V~~~~r~~~~~~~~~~~~-------~~~~~~~~~Dv~~~~~v~~~~~~~~ 77 (255)
T 4eso_A 7 QGKKAIVIGGTHGMGLATVRRLVEGGA--EVLLTGRNESNIARIREEF-------GPRVHALRSDIADLNEIAVLGAAAG 77 (255)
T ss_dssp TTCEEEEETCSSHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHH-------GGGEEEEECCTTCHHHHHHHHHHHH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHh-------CCcceEEEccCCCHHHHHHHHHHHH
Confidence 46789999976653 4556666776 9999999988776665543 2468889999876421
Q ss_pred -CCCceeeEEeccccccCC-----Ch--------------HHHHHHHHhcccCCcEEEEEeec
Q 018740 245 -ASSSIDAVHAGAAIHCWS-----SP--------------STGVAEISRVLRPGGVFVGTTYI 287 (351)
Q Consensus 245 -~~~~fD~V~~~~vl~h~~-----d~--------------~~~l~~i~~~LkpgG~li~~~~~ 287 (351)
..+..|+++.+..+.... ++ ..+.+.+...++++|.++.....
T Consensus 78 ~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~isS~ 140 (255)
T 4eso_A 78 QTLGAIDLLHINAGVSELEPFDQVSEASYDRQFAVNTKGAFFTVQRLTPLIREGGSIVFTSSV 140 (255)
T ss_dssp HHHSSEEEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECCG
T ss_pred HHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhcCCEEEEECCh
Confidence 114689999876543221 11 13455666777778887776543
No 411
>1xa0_A Putative NADPH dependent oxidoreductases; structural genomics, protein structure initiative, MCSG; HET: DTY; 2.80A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1
Probab=86.64 E-value=1.2 Score=40.11 Aligned_cols=97 Identities=14% Similarity=0.124 Sum_probs=59.3
Q ss_pred CCCCCC-eEEEEcC--ccCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHhhhCCCCCCCeEEEEecC--CCC-CCCCC
Q 018740 174 KPVLGG-NIIDASC--GSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADI--SRL-PFASS 247 (351)
Q Consensus 174 ~~~~~~-~vLDiGc--G~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~g~~~~~i~~~~~d~--~~l-p~~~~ 247 (351)
+..++. +||-+|+ |.|.++..+++.. ..+|++++.+++-++.+++. | ...+ +-..+. ..+ ....+
T Consensus 145 ~~~~g~~~VlV~Ga~G~vG~~~~q~a~~~-Ga~vi~~~~~~~~~~~~~~l-----G--a~~~-i~~~~~~~~~~~~~~~~ 215 (328)
T 1xa0_A 145 GLTPERGPVLVTGATGGVGSLAVSMLAKR-GYTVEASTGKAAEHDYLRVL-----G--AKEV-LAREDVMAERIRPLDKQ 215 (328)
T ss_dssp TCCGGGCCEEESSTTSHHHHHHHHHHHHT-TCCEEEEESCTTCHHHHHHT-----T--CSEE-EECC---------CCSC
T ss_pred CCCCCCceEEEecCCCHHHHHHHHHHHHC-CCEEEEEECCHHHHHHHHHc-----C--CcEE-EecCCcHHHHHHHhcCC
Confidence 344554 8999997 4577777777763 34899999998877777652 1 1111 111111 000 11234
Q ss_pred ceeeEEeccccccCCChHHHHHHHHhcccCCcEEEEEee
Q 018740 248 SIDAVHAGAAIHCWSSPSTGVAEISRVLRPGGVFVGTTY 286 (351)
Q Consensus 248 ~fD~V~~~~vl~h~~d~~~~l~~i~~~LkpgG~li~~~~ 286 (351)
.+|+|+-+-. . ..+....+.|+++|.+++...
T Consensus 216 ~~d~vid~~g-----~--~~~~~~~~~l~~~G~~v~~G~ 247 (328)
T 1xa0_A 216 RWAAAVDPVG-----G--RTLATVLSRMRYGGAVAVSGL 247 (328)
T ss_dssp CEEEEEECST-----T--TTHHHHHHTEEEEEEEEECSC
T ss_pred cccEEEECCc-----H--HHHHHHHHhhccCCEEEEEee
Confidence 6999885432 2 247788899999999887543
No 412
>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A*
Probab=86.46 E-value=4 Score=35.18 Aligned_cols=106 Identities=16% Similarity=0.250 Sum_probs=68.6
Q ss_pred CCCeEEEEcCc--cCH---HHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHhhhCCCCCCCeEEEEecCCCCCC-------
Q 018740 177 LGGNIIDASCG--SGL---FSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLPF------- 244 (351)
Q Consensus 177 ~~~~vLDiGcG--~G~---~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~g~~~~~i~~~~~d~~~lp~------- 244 (351)
.++++|=.|++ .|. ++..|++.|. +|+.++.++...+.+.+..... ...++.++.+|+.+..-
T Consensus 6 ~~k~vlVTGasg~~GIG~~ia~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~---~~~~~~~~~~D~~~~~~v~~~~~~ 80 (266)
T 3oig_A 6 EGRNIVVMGVANKRSIAWGIARSLHEAGA--RLIFTYAGERLEKSVHELAGTL---DRNDSIILPCDVTNDAEIETCFAS 80 (266)
T ss_dssp TTCEEEEECCCSTTSHHHHHHHHHHHTTC--EEEEEESSGGGHHHHHHHHHTS---SSCCCEEEECCCSSSHHHHHHHHH
T ss_pred CCCEEEEEcCCCCCcHHHHHHHHHHHCCC--EEEEecCchHHHHHHHHHHHhc---CCCCceEEeCCCCCHHHHHHHHHH
Confidence 36689999976 333 5667777776 8999998876666555554443 12378999999976530
Q ss_pred ---CCCceeeEEecccccc-------C--CChH--------------HHHHHHHhcccCCcEEEEEeec
Q 018740 245 ---ASSSIDAVHAGAAIHC-------W--SSPS--------------TGVAEISRVLRPGGVFVGTTYI 287 (351)
Q Consensus 245 ---~~~~fD~V~~~~vl~h-------~--~d~~--------------~~l~~i~~~LkpgG~li~~~~~ 287 (351)
..+..|+++.+..+.+ + .+.+ .+++.+...++++|.++.....
T Consensus 81 ~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~isS~ 149 (266)
T 3oig_A 81 IKEQVGVIHGIAHCIAFANKEELVGEYLNTNRDGFLLAHNISSYSLTAVVKAARPMMTEGGSIVTLTYL 149 (266)
T ss_dssp HHHHHSCCCEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTTCEEEEEEECG
T ss_pred HHHHhCCeeEEEEccccccccccccchhhccHHHHHHHHHHhHHHHHHHHHHHHhhcCCCceEEEEecc
Confidence 0136899887765432 1 1111 2456677778888888776644
No 413
>2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens}
Probab=86.32 E-value=3 Score=38.24 Aligned_cols=95 Identities=13% Similarity=0.076 Sum_probs=58.0
Q ss_pred CCCCCeEEEEc-Cc-cCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHhhhCCCCCCCeEEEEecCCCCC---CCCCce
Q 018740 175 PVLGGNIIDAS-CG-SGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLP---FASSSI 249 (351)
Q Consensus 175 ~~~~~~vLDiG-cG-~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~g~~~~~i~~~~~d~~~lp---~~~~~f 249 (351)
..++.+||=+| +| .|.++..+++.. +.+|++++ ++.-.+.+++. ... ..+..+-.++. .....+
T Consensus 181 ~~~g~~VlV~Ga~G~vG~~~~qla~~~-Ga~Vi~~~-~~~~~~~~~~l--------Ga~-~v~~~~~~~~~~~~~~~~g~ 249 (375)
T 2vn8_A 181 NCTGKRVLILGASGGVGTFAIQVMKAW-DAHVTAVC-SQDASELVRKL--------GAD-DVIDYKSGSVEEQLKSLKPF 249 (375)
T ss_dssp TCTTCEEEEETTTSHHHHHHHHHHHHT-TCEEEEEE-CGGGHHHHHHT--------TCS-EEEETTSSCHHHHHHTSCCB
T ss_pred cCCCCEEEEECCCCHHHHHHHHHHHhC-CCEEEEEe-ChHHHHHHHHc--------CCC-EEEECCchHHHHHHhhcCCC
Confidence 56788999999 34 488777777763 34899998 66666666542 111 11211111110 011468
Q ss_pred eeEEeccccccCCChHHHHHHHHhcccCCcEEEEEe
Q 018740 250 DAVHAGAAIHCWSSPSTGVAEISRVLRPGGVFVGTT 285 (351)
Q Consensus 250 D~V~~~~vl~h~~d~~~~l~~i~~~LkpgG~li~~~ 285 (351)
|+|+-+ ...+...+....+.|+++|.++...
T Consensus 250 D~vid~-----~g~~~~~~~~~~~~l~~~G~iv~~g 280 (375)
T 2vn8_A 250 DFILDN-----VGGSTETWAPDFLKKWSGATYVTLV 280 (375)
T ss_dssp SEEEES-----SCTTHHHHGGGGBCSSSCCEEEESC
T ss_pred CEEEEC-----CCChhhhhHHHHHhhcCCcEEEEeC
Confidence 998843 3344345677788999999988754
No 414
>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0
Probab=86.11 E-value=7 Score=34.18 Aligned_cols=77 Identities=13% Similarity=0.212 Sum_probs=54.7
Q ss_pred CCeEEEEcCccCH---HHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHhhhCCCCCCCeEEEEecCCCC-C----C-----
Q 018740 178 GGNIIDASCGSGL---FSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRL-P----F----- 244 (351)
Q Consensus 178 ~~~vLDiGcG~G~---~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~g~~~~~i~~~~~d~~~l-p----~----- 244 (351)
+++||=.|++.|. ++..|++.|. +|++++.+....+.+.+.+... ...++.++.+|+.+. . +
T Consensus 12 ~k~vlITGas~GIG~~~a~~L~~~G~--~V~~~~r~~~~~~~~~~~l~~~---~~~~~~~~~~Dl~~~~~~v~~~~~~~~ 86 (311)
T 3o26_A 12 RRCAVVTGGNKGIGFEICKQLSSNGI--MVVLTCRDVTKGHEAVEKLKNS---NHENVVFHQLDVTDPIATMSSLADFIK 86 (311)
T ss_dssp CCEEEESSCSSHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHHTT---TCCSEEEEECCTTSCHHHHHHHHHHHH
T ss_pred CcEEEEecCCchHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHHhc---CCCceEEEEccCCCcHHHHHHHHHHHH
Confidence 5688888876552 4555666676 9999999998877777666554 245799999999875 2 0
Q ss_pred -CCCceeeEEeccccc
Q 018740 245 -ASSSIDAVHAGAAIH 259 (351)
Q Consensus 245 -~~~~fD~V~~~~vl~ 259 (351)
..+..|+++.+..+.
T Consensus 87 ~~~g~iD~lv~nAg~~ 102 (311)
T 3o26_A 87 THFGKLDILVNNAGVA 102 (311)
T ss_dssp HHHSSCCEEEECCCCC
T ss_pred HhCCCCCEEEECCccc
Confidence 014689999877653
No 415
>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A*
Probab=86.01 E-value=6.2 Score=34.64 Aligned_cols=104 Identities=20% Similarity=0.240 Sum_probs=65.9
Q ss_pred CCCeEEEEcCccCH---HHHHHHHhCCCCeEEEEeCCHH-HHHHHHHHHhhhCCCCCCCeEEEEecCCCCC-----C---
Q 018740 177 LGGNIIDASCGSGL---FSRIFAKSGLFSLVVALDYSEN-MLKQCYEFVQQESNFPKENFLLVRADISRLP-----F--- 244 (351)
Q Consensus 177 ~~~~vLDiGcG~G~---~~~~l~~~~~~~~v~gvD~s~~-~~~~a~~~~~~~~g~~~~~i~~~~~d~~~lp-----~--- 244 (351)
.++++|=.|++.|. ++..|++.|. +|+.+|.+.. ..+...+.+... ..++.++.+|+.+.. +
T Consensus 46 ~gk~vlVTGas~GIG~aia~~la~~G~--~V~~~~r~~~~~~~~~~~~~~~~----~~~~~~~~~Dv~d~~~v~~~~~~~ 119 (291)
T 3ijr_A 46 KGKNVLITGGDSGIGRAVSIAFAKEGA--NIAIAYLDEEGDANETKQYVEKE----GVKCVLLPGDLSDEQHCKDIVQET 119 (291)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTC--EEEEEESSCHHHHHHHHHHHHTT----TCCEEEEESCTTSHHHHHHHHHHH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCC--EEEEEeCCchHHHHHHHHHHHhc----CCcEEEEECCCCCHHHHHHHHHHH
Confidence 46789999976653 4556666776 8999998764 344444444443 467899999997642 0
Q ss_pred --CCCceeeEEeccccccCC------Ch--------------HHHHHHHHhcccCCcEEEEEee
Q 018740 245 --ASSSIDAVHAGAAIHCWS------SP--------------STGVAEISRVLRPGGVFVGTTY 286 (351)
Q Consensus 245 --~~~~fD~V~~~~vl~h~~------d~--------------~~~l~~i~~~LkpgG~li~~~~ 286 (351)
..+..|+++.+....+.. +. ..+++.+.+.++.+|.++....
T Consensus 120 ~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~g~iv~isS 183 (291)
T 3ijr_A 120 VRQLGSLNILVNNVAQQYPQQGLEYITAEQLEKTFRINIFSYFHVTKAALSHLKQGDVIINTAS 183 (291)
T ss_dssp HHHHSSCCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCCTTCEEEEECC
T ss_pred HHHcCCCCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhCCEEEEEec
Confidence 113689999775432211 11 1345667777888888776543
No 416
>1tt7_A YHFP; alcohol dehydrogenase, Zn-dependent, NAD, structural genomics, protein structure initiative, PSI; 2.70A {Bacillus subtilis} SCOP: b.35.1.2 c.2.1.1 PDB: 1y9e_A*
Probab=85.63 E-value=1.5 Score=39.39 Aligned_cols=97 Identities=11% Similarity=0.097 Sum_probs=60.1
Q ss_pred CCCCCC-eEEEEcC--ccCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHhhhCCCCCCCeEEEEecC--CCC-CCCCC
Q 018740 174 KPVLGG-NIIDASC--GSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADI--SRL-PFASS 247 (351)
Q Consensus 174 ~~~~~~-~vLDiGc--G~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~g~~~~~i~~~~~d~--~~l-p~~~~ 247 (351)
+..++. +||-+|+ |.|.++..+++.. ..+|++++.+++-++.+++. | ...+ +-..+. ..+ ....+
T Consensus 146 ~~~~g~~~VlV~Ga~G~vG~~~~q~a~~~-Ga~vi~~~~~~~~~~~~~~l-----G--a~~v-~~~~~~~~~~~~~~~~~ 216 (330)
T 1tt7_A 146 GLSPEKGSVLVTGATGGVGGIAVSMLNKR-GYDVVASTGNREAADYLKQL-----G--ASEV-ISREDVYDGTLKALSKQ 216 (330)
T ss_dssp TCCGGGCCEEEESTTSHHHHHHHHHHHHH-TCCEEEEESSSSTHHHHHHH-----T--CSEE-EEHHHHCSSCCCSSCCC
T ss_pred CcCCCCceEEEECCCCHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHc-----C--CcEE-EECCCchHHHHHHhhcC
Confidence 344554 8999997 3477777776652 23899999998877777653 1 1111 111111 111 12234
Q ss_pred ceeeEEeccccccCCChHHHHHHHHhcccCCcEEEEEee
Q 018740 248 SIDAVHAGAAIHCWSSPSTGVAEISRVLRPGGVFVGTTY 286 (351)
Q Consensus 248 ~fD~V~~~~vl~h~~d~~~~l~~i~~~LkpgG~li~~~~ 286 (351)
.+|+|+.+- .. ..+....+.|+++|.+++...
T Consensus 217 ~~d~vid~~-----g~--~~~~~~~~~l~~~G~iv~~G~ 248 (330)
T 1tt7_A 217 QWQGAVDPV-----GG--KQLASLLSKIQYGGSVAVSGL 248 (330)
T ss_dssp CEEEEEESC-----CT--HHHHHHHTTEEEEEEEEECCC
T ss_pred CccEEEECC-----cH--HHHHHHHHhhcCCCEEEEEec
Confidence 699988433 33 358888999999999987543
No 417
>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*
Probab=85.19 E-value=5.6 Score=35.57 Aligned_cols=90 Identities=14% Similarity=0.209 Sum_probs=57.7
Q ss_pred CeEEEEcCcc-C-HHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHhhhCCCCCCCeEEEEecCCC-CCCCCCceeeEEec
Q 018740 179 GNIIDASCGS-G-LFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISR-LPFASSSIDAVHAG 255 (351)
Q Consensus 179 ~~vLDiGcG~-G-~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~g~~~~~i~~~~~d~~~-lp~~~~~fD~V~~~ 255 (351)
.+|.=||+|. | .++..+.+.|...+|+++|.+++.++.+++. |. +.-...|..+ . -...|+|+..
T Consensus 34 ~kI~IIG~G~mG~slA~~l~~~G~~~~V~~~dr~~~~~~~a~~~-----G~----~~~~~~~~~~~~---~~~aDvVila 101 (314)
T 3ggo_A 34 QNVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDINPESISKAVDL-----GI----IDEGTTSIAKVE---DFSPDFVMLS 101 (314)
T ss_dssp SEEEEESCSHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHT-----TS----CSEEESCTTGGG---GGCCSEEEEC
T ss_pred CEEEEEeeCHHHHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHC-----CC----cchhcCCHHHHh---hccCCEEEEe
Confidence 5899999885 3 4566677776545899999999887777642 11 1112234333 1 1347998865
Q ss_pred cccccCCChHHHHHHHHhcccCCcEEEE
Q 018740 256 AAIHCWSSPSTGVAEISRVLRPGGVFVG 283 (351)
Q Consensus 256 ~vl~h~~d~~~~l~~i~~~LkpgG~li~ 283 (351)
--.. ....+++++...|+||.+++-
T Consensus 102 vp~~---~~~~vl~~l~~~l~~~~iv~d 126 (314)
T 3ggo_A 102 SPVR---TFREIAKKLSYILSEDATVTD 126 (314)
T ss_dssp SCGG---GHHHHHHHHHHHSCTTCEEEE
T ss_pred CCHH---HHHHHHHHHhhccCCCcEEEE
Confidence 3322 235678888888998876543
No 418
>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A
Probab=85.13 E-value=7 Score=33.76 Aligned_cols=106 Identities=18% Similarity=0.189 Sum_probs=68.3
Q ss_pred CCCeEEEEcCccCH---HHHHHHHhCCCCeEEEEeC-CHHHHHHHHHHHhhhCCCCCCCeEEEEecCCCCCC--------
Q 018740 177 LGGNIIDASCGSGL---FSRIFAKSGLFSLVVALDY-SENMLKQCYEFVQQESNFPKENFLLVRADISRLPF-------- 244 (351)
Q Consensus 177 ~~~~vLDiGcG~G~---~~~~l~~~~~~~~v~gvD~-s~~~~~~a~~~~~~~~g~~~~~i~~~~~d~~~lp~-------- 244 (351)
.++++|=.|++.|. .+..|++.|. +|+.++. +....+...+.+... ..++.++.+|+.+..-
T Consensus 17 ~~k~~lVTGas~gIG~aia~~l~~~G~--~V~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~Dv~~~~~v~~~~~~~ 90 (270)
T 3is3_A 17 DGKVALVTGSGRGIGAAVAVHLGRLGA--KVVVNYANSTKDAEKVVSEIKAL----GSDAIAIKADIRQVPEIVKLFDQA 90 (270)
T ss_dssp TTCEEEESCTTSHHHHHHHHHHHHTTC--EEEEEESSCHHHHHHHHHHHHHT----TCCEEEEECCTTSHHHHHHHHHHH
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC--EEEEEcCCCHHHHHHHHHHHHhc----CCcEEEEEcCCCCHHHHHHHHHHH
Confidence 46688888876653 4556666776 8888775 455555555555544 5678999999976420
Q ss_pred --CCCceeeEEeccccccCC-----Ch--------------HHHHHHHHhcccCCcEEEEEeecc
Q 018740 245 --ASSSIDAVHAGAAIHCWS-----SP--------------STGVAEISRVLRPGGVFVGTTYIV 288 (351)
Q Consensus 245 --~~~~fD~V~~~~vl~h~~-----d~--------------~~~l~~i~~~LkpgG~li~~~~~~ 288 (351)
.-+..|+++.+..+.+.. ++ ..+.+.+.+.++++|.++......
T Consensus 91 ~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~isS~~ 155 (270)
T 3is3_A 91 VAHFGHLDIAVSNSGVVSFGHLKDVTEEEFDRVFSLNTRGQFFVAREAYRHLTEGGRIVLTSSNT 155 (270)
T ss_dssp HHHHSCCCEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCTTCEEEEECCTT
T ss_pred HHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCeEEEEeCch
Confidence 013689999776553321 11 134566777888889888766543
No 419
>4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A
Probab=85.04 E-value=5.1 Score=34.52 Aligned_cols=106 Identities=19% Similarity=0.195 Sum_probs=70.0
Q ss_pred CCCeEEEEcC----ccCH-HHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHhhhCCCCCCCeEEEEecCCCCC--------
Q 018740 177 LGGNIIDASC----GSGL-FSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLP-------- 243 (351)
Q Consensus 177 ~~~~vLDiGc----G~G~-~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~g~~~~~i~~~~~d~~~lp-------- 243 (351)
.++++|=-|. |-|. .+..|++.|. +|+..|.++..++.+.+.+.+. ...++.++.+|+.+..
T Consensus 5 ~gK~alVTGaa~~~GIG~aiA~~la~~Ga--~Vvi~~r~~~~~~~~~~~~~~~---~~~~~~~~~~Dv~~~~~v~~~~~~ 79 (256)
T 4fs3_A 5 ENKTYVIMGIANKRSIAFGVAKVLDQLGA--KLVFTYRKERSRKELEKLLEQL---NQPEAHLYQIDVQSDEEVINGFEQ 79 (256)
T ss_dssp TTCEEEEECCCSTTCHHHHHHHHHHHTTC--EEEEEESSGGGHHHHHHHHGGG---TCSSCEEEECCTTCHHHHHHHHHH
T ss_pred CCCEEEEECCCCCchHHHHHHHHHHHCCC--EEEEEECCHHHHHHHHHHHHhc---CCCcEEEEEccCCCHHHHHHHHHH
Confidence 4778999985 3344 5677778887 9999999988888887777665 2457888999987632
Q ss_pred --CCCCceeeEEeccccccC-------C--ChH--------------HHHHHHHhcccCCcEEEEEeec
Q 018740 244 --FASSSIDAVHAGAAIHCW-------S--SPS--------------TGVAEISRVLRPGGVFVGTTYI 287 (351)
Q Consensus 244 --~~~~~fD~V~~~~vl~h~-------~--d~~--------------~~l~~i~~~LkpgG~li~~~~~ 287 (351)
-.-+..|+++.+..+... . +.+ ...+.....++.+|.++.....
T Consensus 80 ~~~~~G~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~G~IVnisS~ 148 (256)
T 4fs3_A 80 IGKDVGNIDGVYHSIAFANMEDLRGRFSETSREGFLLAQDISSYSLTIVAHEAKKLMPEGGSIVATTYL 148 (256)
T ss_dssp HHHHHCCCSEEEECCCCCCGGGGTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCTTCEEEEEEECG
T ss_pred HHHHhCCCCEEEeccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHHHHHHhccCCEEEEEecc
Confidence 112578998876543211 1 111 1223455667788988776654
No 420
>3po3_S Transcription elongation factor S-II; RNA polymerase II, mRNA, transcription, arrest, BACKTRACKING cleavage, transferase-DNA-RNA complex; HET: DNA BRU EPE PGE; 3.30A {Saccharomyces cerevisiae} PDB: 1y1v_S 1y1y_S 3gtm_S* 1enw_A
Probab=85.01 E-value=0.76 Score=37.77 Aligned_cols=40 Identities=13% Similarity=0.354 Sum_probs=25.7
Q ss_pred CCceeCCCCCCCcc-cccCCCcccccccCCccccccccccc
Q 018740 69 KNVLACPICYKPLT-WIGDSSLSIESAAGSSLQCNTCKKTY 108 (351)
Q Consensus 69 ~~~l~CP~C~~~l~-~~~~~~~~~~~~~~~~~~C~~C~~~~ 108 (351)
.....||.|+..-. .-.....+.++-....+.|.+|++.+
T Consensus 135 t~~~~Cp~C~~~~a~~~q~Q~rsaDE~mt~f~~C~~C~~~w 175 (178)
T 3po3_S 135 TDRFTCGKCKEKKVSYYQLQTRSAAAPLTTFCTCEACGNRW 175 (178)
T ss_dssp BSSSCCSSSCCSCEECCCCCCSCTTSCCCCCEEETTTCCEE
T ss_pred cCCcCCCCCCCCceEEEEeecccCCCCCcEEEEcCCCCCee
Confidence 34678999998421 11112334455666788999999875
No 421
>2k4x_A 30S ribosomal protein S27AE; metal-binding, ribonucleoprotein, zinc, zinc-finger, structural genomics, PSI-2; NMR {Thermoplasma acidophilum} SCOP: g.41.8.8
Probab=84.88 E-value=0.49 Score=30.75 Aligned_cols=30 Identities=20% Similarity=0.335 Sum_probs=21.5
Q ss_pred ceeCCCCCCCcccccCCCcccccccCCcccccccccccc
Q 018740 71 VLACPICYKPLTWIGDSSLSIESAAGSSLQCNTCKKTYS 109 (351)
Q Consensus 71 ~l~CP~C~~~l~~~~~~~~~~~~~~~~~~~C~~C~~~~~ 109 (351)
...||.||+.+.... ..+.+.|..|+..+.
T Consensus 18 ~~fCPkCG~~~~ma~---------~~dr~~C~kCgyt~~ 47 (55)
T 2k4x_A 18 HRFCPRCGPGVFLAE---------HADRYSCGRCGYTEF 47 (55)
T ss_dssp SCCCTTTTTTCCCEE---------CSSEEECTTTCCCEE
T ss_pred cccCcCCCCceeEec---------cCCEEECCCCCCEEE
Confidence 578999998654332 136899999987653
No 422
>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*
Probab=84.79 E-value=0.59 Score=43.30 Aligned_cols=102 Identities=18% Similarity=0.146 Sum_probs=56.0
Q ss_pred CCCCeEEEEcCcc-CHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHhhhCCCCCCCeEEEEecCCCCCCCCCceeeEEe
Q 018740 176 VLGGNIIDASCGS-GLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLPFASSSIDAVHA 254 (351)
Q Consensus 176 ~~~~~vLDiGcG~-G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~g~~~~~i~~~~~d~~~lp~~~~~fD~V~~ 254 (351)
.++.+|+=+|+|. |......++.. +.+|+++|.++..++.+++.+. ..+.....+..++.-.-...|+|+.
T Consensus 166 l~g~~V~ViG~G~iG~~~a~~a~~~-Ga~V~~~d~~~~~l~~~~~~~g-------~~~~~~~~~~~~l~~~l~~aDvVi~ 237 (377)
T 2vhw_A 166 VEPADVVVIGAGTAGYNAARIANGM-GATVTVLDINIDKLRQLDAEFC-------GRIHTRYSSAYELEGAVKRADLVIG 237 (377)
T ss_dssp BCCCEEEEECCSHHHHHHHHHHHHT-TCEEEEEESCHHHHHHHHHHTT-------TSSEEEECCHHHHHHHHHHCSEEEE
T ss_pred CCCCEEEEECCCHHHHHHHHHHHhC-CCEEEEEeCCHHHHHHHHHhcC-------CeeEeccCCHHHHHHHHcCCCEEEE
Confidence 3577999999864 55444444432 2399999999988777765321 1111111111111100125799986
Q ss_pred ccccccCCChHHHHHHHHhcccCCcEEEEEe
Q 018740 255 GAAIHCWSSPSTGVAEISRVLRPGGVFVGTT 285 (351)
Q Consensus 255 ~~vl~h~~d~~~~l~~i~~~LkpgG~li~~~ 285 (351)
.-.......+.-+.++..+.++|||+++...
T Consensus 238 ~~~~p~~~t~~li~~~~l~~mk~g~~iV~va 268 (377)
T 2vhw_A 238 AVLVPGAKAPKLVSNSLVAHMKPGAVLVDIA 268 (377)
T ss_dssp CCCCTTSCCCCCBCHHHHTTSCTTCEEEEGG
T ss_pred CCCcCCCCCcceecHHHHhcCCCCcEEEEEe
Confidence 4322111112222456677899999887654
No 423
>4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A
Probab=84.52 E-value=4.7 Score=37.90 Aligned_cols=97 Identities=21% Similarity=0.176 Sum_probs=61.8
Q ss_pred cCCCCCCeEEEEcC-c-cCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHhhhCCCCCCCeEEEEe--cCCC-------
Q 018740 173 LKPVLGGNIIDASC-G-SGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRA--DISR------- 241 (351)
Q Consensus 173 l~~~~~~~vLDiGc-G-~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~g~~~~~i~~~~~--d~~~------- 241 (351)
.+..++.+||-+|+ | .|..+..+++.. ..++++++.+++-++.+++. | ...+ +... |...
T Consensus 216 ~~~~~g~~VlV~GasG~iG~~a~qla~~~-Ga~vi~~~~~~~~~~~~~~l-----G--a~~~-i~~~~~~~~~~~~~~~~ 286 (447)
T 4a0s_A 216 AQMKQGDIVLIWGASGGLGSYAIQFVKNG-GGIPVAVVSSAQKEAAVRAL-----G--CDLV-INRAELGITDDIADDPR 286 (447)
T ss_dssp TCCCTTCEEEETTTTSHHHHHHHHHHHHT-TCEEEEEESSHHHHHHHHHT-----T--CCCE-EEHHHHTCCTTGGGCHH
T ss_pred cCCCCCCEEEEECCCCHHHHHHHHHHHHc-CCEEEEEeCCHHHHHHHHhc-----C--CCEE-Eeccccccccccccccc
Confidence 45667899999997 3 477777777763 34999999999888888652 1 1111 1111 1100
Q ss_pred ------------C-CCCCCceeeEEeccccccCCChHHHHHHHHhcccCCcEEEEEe
Q 018740 242 ------------L-PFASSSIDAVHAGAAIHCWSSPSTGVAEISRVLRPGGVFVGTT 285 (351)
Q Consensus 242 ------------l-p~~~~~fD~V~~~~vl~h~~d~~~~l~~i~~~LkpgG~li~~~ 285 (351)
+ ......+|+|+-+-. . ..++...+.|+++|.++...
T Consensus 287 ~~~~~~~~~~~~v~~~~g~g~Dvvid~~G-----~--~~~~~~~~~l~~~G~iv~~G 336 (447)
T 4a0s_A 287 RVVETGRKLAKLVVEKAGREPDIVFEHTG-----R--VTFGLSVIVARRGGTVVTCG 336 (447)
T ss_dssp HHHHHHHHHHHHHHHHHSSCCSEEEECSC-----H--HHHHHHHHHSCTTCEEEESC
T ss_pred ccchhhhHHHHHHHHHhCCCceEEEECCC-----c--hHHHHHHHHHhcCCEEEEEe
Confidence 0 001246899985433 1 35778889999999998854
No 424
>1boo_A Protein (N-4 cytosine-specific methyltransferase PVU II); type II DNA-(cytosine N4) methyltransferase, amino methylation, selenomethionine; HET: SAH; 2.80A {Proteus vulgaris} SCOP: c.66.1.11
Probab=84.51 E-value=0.94 Score=40.93 Aligned_cols=57 Identities=21% Similarity=0.150 Sum_probs=40.7
Q ss_pred CCeEEEEecCCC-CC-CCCCceeeEEeccccccC--------------CChHHHHHHHHhcccCCcEEEEEee
Q 018740 230 ENFLLVRADISR-LP-FASSSIDAVHAGAAIHCW--------------SSPSTGVAEISRVLRPGGVFVGTTY 286 (351)
Q Consensus 230 ~~i~~~~~d~~~-lp-~~~~~fD~V~~~~vl~h~--------------~d~~~~l~~i~~~LkpgG~li~~~~ 286 (351)
....++++|..+ +. +++++||+|++.--.... ......++++.++|+|||.+++...
T Consensus 13 ~~~~ii~gD~~~~l~~l~~~svDlI~tDPPY~~~~~~~y~~~~~~~~~~~l~~~l~~~~rvLk~~G~i~i~~~ 85 (323)
T 1boo_A 13 SNGSMYIGDSLELLESFPEESISLVMTSPPFALQRKKEYGNLEQHEYVDWFLSFAKVVNKKLKPDGSFVVDFG 85 (323)
T ss_dssp SSEEEEESCHHHHGGGSCSSCEEEEEECCCCSSSCSCSSCSCHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred CCceEEeCcHHHHHhhCCCCCeeEEEECCCCCCCcccccCCcCHHHHHHHHHHHHHHHHHHCcCCcEEEEEEC
Confidence 467788999754 33 457899999986332111 1245778999999999999988654
No 425
>3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp}
Probab=84.41 E-value=6 Score=34.81 Aligned_cols=105 Identities=18% Similarity=0.174 Sum_probs=67.0
Q ss_pred CCCeEEEEcCccCH---HHHHHHHhCCCCeEEEEeCC--HHHHHHHHHHHhhhCCCCCCCeEEEEecCCCCCC-------
Q 018740 177 LGGNIIDASCGSGL---FSRIFAKSGLFSLVVALDYS--ENMLKQCYEFVQQESNFPKENFLLVRADISRLPF------- 244 (351)
Q Consensus 177 ~~~~vLDiGcG~G~---~~~~l~~~~~~~~v~gvD~s--~~~~~~a~~~~~~~~g~~~~~i~~~~~d~~~lp~------- 244 (351)
.++++|=.|++.|. ++..|++.|. +|+.+|.+ ....+...+.+... ..++.++.+|+.+...
T Consensus 48 ~~k~vlVTGas~GIG~aia~~la~~G~--~V~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~Dv~d~~~v~~~~~~ 121 (294)
T 3r3s_A 48 KDRKALVTGGDSGIGRAAAIAYAREGA--DVAINYLPAEEEDAQQVKALIEEC----GRKAVLLPGDLSDESFARSLVHK 121 (294)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTC--EEEEECCGGGHHHHHHHHHHHHHT----TCCEEECCCCTTSHHHHHHHHHH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCC--EEEEEeCCcchhHHHHHHHHHHHc----CCcEEEEEecCCCHHHHHHHHHH
Confidence 36689999976553 4556666776 89999886 33444444444444 4678889999876420
Q ss_pred ---CCCceeeEEecccccc-CC-----Ch--------------HHHHHHHHhcccCCcEEEEEeec
Q 018740 245 ---ASSSIDAVHAGAAIHC-WS-----SP--------------STGVAEISRVLRPGGVFVGTTYI 287 (351)
Q Consensus 245 ---~~~~fD~V~~~~vl~h-~~-----d~--------------~~~l~~i~~~LkpgG~li~~~~~ 287 (351)
..+..|+++.+..... .. ++ ..+++.+...++.+|.++.....
T Consensus 122 ~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~g~Iv~isS~ 187 (294)
T 3r3s_A 122 AREALGGLDILALVAGKQTAIPEIKDLTSEQFQQTFAVNVFALFWITQEAIPLLPKGASIITTSSI 187 (294)
T ss_dssp HHHHHTCCCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCCTTCEEEEECCG
T ss_pred HHHHcCCCCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhhcCCEEEEECCh
Confidence 0146899998766432 11 11 14456677778888888776544
No 426
>3me5_A Cytosine-specific methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 1.75A {Shigella flexneri 2A} PDB: 3lx6_A
Probab=84.27 E-value=2 Score=41.17 Aligned_cols=71 Identities=17% Similarity=0.164 Sum_probs=50.6
Q ss_pred HHHHHhccCCC------CCCeEEEEcCccCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHhhhCCCCCCCeEEEEecC
Q 018740 166 FELMKGYLKPV------LGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADI 239 (351)
Q Consensus 166 ~~~l~~~l~~~------~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~g~~~~~i~~~~~d~ 239 (351)
...+..+++.. ..-+++|+=||.|.+...+.+.|. ..|.++|+++.+++.-+.+... .+...++.+|+
T Consensus 70 ~~~l~~~~~~~p~~~~~~~~~viDLFaG~GGlslG~~~aG~-~~v~avE~d~~A~~ty~~N~~~-----~p~~~~~~~DI 143 (482)
T 3me5_A 70 FAHLQTLLPKPPEHHPHYAFRFIDLFAGIGGIRRGFESIGG-QCVFTSEWNKHAVRTYKANHYC-----DPATHHFNEDI 143 (482)
T ss_dssp HHHHHTTSCCCCTTTTCCSEEEEEESCTTSHHHHHHHTTTE-EEEEEECCCHHHHHHHHHHSCC-----CTTTCEEESCT
T ss_pred HHHHHhhCCCCCccCCCccceEEEecCCccHHHHHHHHCCC-EEEEEEeCCHHHHHHHHHhccc-----CCCcceeccch
Confidence 45555555432 235899999999999999998875 3478999999888877776421 13445677887
Q ss_pred CCC
Q 018740 240 SRL 242 (351)
Q Consensus 240 ~~l 242 (351)
.++
T Consensus 144 ~~i 146 (482)
T 3me5_A 144 RDI 146 (482)
T ss_dssp HHH
T ss_pred hhh
Confidence 654
No 427
>1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A*
Probab=84.24 E-value=4.6 Score=34.61 Aligned_cols=102 Identities=15% Similarity=0.049 Sum_probs=62.9
Q ss_pred CCeEEEEcCccCHHH----HHHHH-hCCCCeEEEEeCCHHHHHHHHHHHhhhCCCCCCCeEEEEecCCCCCC-----C--
Q 018740 178 GGNIIDASCGSGLFS----RIFAK-SGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLPF-----A-- 245 (351)
Q Consensus 178 ~~~vLDiGcG~G~~~----~~l~~-~~~~~~v~gvD~s~~~~~~a~~~~~~~~g~~~~~i~~~~~d~~~lp~-----~-- 245 (351)
+++||=.|++ |..+ ..|++ .+. +|+.++.++...+...+.+... ..++.++.+|+.+... .
T Consensus 4 ~k~vlITGas-ggIG~~~a~~L~~~~g~--~V~~~~r~~~~~~~~~~~l~~~----~~~~~~~~~Dl~~~~~~~~~~~~~ 76 (276)
T 1wma_A 4 IHVALVTGGN-KGIGLAIVRDLCRLFSG--DVVLTARDVTRGQAAVQQLQAE----GLSPRFHQLDIDDLQSIRALRDFL 76 (276)
T ss_dssp CCEEEESSCS-SHHHHHHHHHHHHHSSS--EEEEEESSHHHHHHHHHHHHHT----TCCCEEEECCTTCHHHHHHHHHHH
T ss_pred CCEEEEeCCC-cHHHHHHHHHHHHhcCC--eEEEEeCChHHHHHHHHHHHhc----CCeeEEEECCCCCHHHHHHHHHHH
Confidence 5678877754 4444 44455 555 9999999987776666665544 4578899999876420 0
Q ss_pred ---CCceeeEEeccccccCC----C-h--------------HHHHHHHHhcccCCcEEEEEee
Q 018740 246 ---SSSIDAVHAGAAIHCWS----S-P--------------STGVAEISRVLRPGGVFVGTTY 286 (351)
Q Consensus 246 ---~~~fD~V~~~~vl~h~~----d-~--------------~~~l~~i~~~LkpgG~li~~~~ 286 (351)
.+.+|+|+.+....... . . ..+++.+.+.++++|.++....
T Consensus 77 ~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~~sS 139 (276)
T 1wma_A 77 RKEYGGLDVLVNNAGIAFKVADPTPFHIQAEVTMKTNFFGTRDVCTELLPLIKPQGRVVNVSS 139 (276)
T ss_dssp HHHHSSEEEEEECCCCCCCTTCCSCHHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECC
T ss_pred HHhcCCCCEEEECCcccccCCCccccHHHHHhhhheeeeeHHHHHHHHHHhhCCCCEEEEECC
Confidence 13689999765432211 1 1 1344556666666777776543
No 428
>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti}
Probab=84.19 E-value=7.9 Score=33.57 Aligned_cols=105 Identities=18% Similarity=0.197 Sum_probs=67.7
Q ss_pred CCCeEEEEcCccCH---HHHHHHHhCCCCeEEEEeCC-HHHHHHHHHHHhhhCCCCCCCeEEEEecCCCCC-----C---
Q 018740 177 LGGNIIDASCGSGL---FSRIFAKSGLFSLVVALDYS-ENMLKQCYEFVQQESNFPKENFLLVRADISRLP-----F--- 244 (351)
Q Consensus 177 ~~~~vLDiGcG~G~---~~~~l~~~~~~~~v~gvD~s-~~~~~~a~~~~~~~~g~~~~~i~~~~~d~~~lp-----~--- 244 (351)
.++++|=.|++.|. ++..|++.|. +|+.++.. ....+...+.+... ..++.++.+|+.+.. +
T Consensus 30 ~gk~~lVTGas~GIG~aia~~la~~G~--~V~~~~~~~~~~~~~~~~~l~~~----~~~~~~~~~Dv~d~~~v~~~~~~~ 103 (271)
T 3v2g_A 30 AGKTAFVTGGSRGIGAAIAKRLALEGA--AVALTYVNAAERAQAVVSEIEQA----GGRAVAIRADNRDAEAIEQAIRET 103 (271)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTC--EEEEEESSCHHHHHHHHHHHHHT----TCCEEEEECCTTCHHHHHHHHHHH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCC--EEEEEeCCCHHHHHHHHHHHHhc----CCcEEEEECCCCCHHHHHHHHHHH
Confidence 46789999987653 5566667776 89888654 45555555555544 467889999997642 0
Q ss_pred --CCCceeeEEeccccccCC-----C--------------hHHHHHHHHhcccCCcEEEEEeec
Q 018740 245 --ASSSIDAVHAGAAIHCWS-----S--------------PSTGVAEISRVLRPGGVFVGTTYI 287 (351)
Q Consensus 245 --~~~~fD~V~~~~vl~h~~-----d--------------~~~~l~~i~~~LkpgG~li~~~~~ 287 (351)
..+..|+++.+..+.+.. + +..+++.+.+.++++|.++.....
T Consensus 104 ~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~g~iv~isS~ 167 (271)
T 3v2g_A 104 VEALGGLDILVNSAGIWHSAPLEETTVADFDEVMAVNFRAPFVAIRSASRHLGDGGRIITIGSN 167 (271)
T ss_dssp HHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCTTCEEEEECCG
T ss_pred HHHcCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCEEEEEeCh
Confidence 113689999876543221 1 123456677778888888776543
No 429
>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp}
Probab=83.98 E-value=6.8 Score=33.93 Aligned_cols=78 Identities=17% Similarity=0.213 Sum_probs=57.8
Q ss_pred CCCeEEEEcCccCH---HHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHhhhCCCCCCCeEEEEecCCCCC----------
Q 018740 177 LGGNIIDASCGSGL---FSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLP---------- 243 (351)
Q Consensus 177 ~~~~vLDiGcG~G~---~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~g~~~~~i~~~~~d~~~lp---------- 243 (351)
.++++|=-|.+.|. .+..|++.|. +|+..|.+++.++...+.+... ..++..+.+|+.+..
T Consensus 8 ~gKvalVTGas~GIG~aia~~la~~Ga--~Vvi~~~~~~~~~~~~~~l~~~----g~~~~~~~~Dv~~~~~v~~~~~~~~ 81 (255)
T 4g81_D 8 TGKTALVTGSARGLGFAYAEGLAAAGA--RVILNDIRATLLAESVDTLTRK----GYDAHGVAFDVTDELAIEAAFSKLD 81 (255)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHTTC--EEEECCSCHHHHHHHHHHHHHT----TCCEEECCCCTTCHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCC--EEEEEECCHHHHHHHHHHHHhc----CCcEEEEEeeCCCHHHHHHHHHHHH
Confidence 46788888877664 4566677776 9999999999888887777665 567888999987532
Q ss_pred CCCCceeeEEecccccc
Q 018740 244 FASSSIDAVHAGAAIHC 260 (351)
Q Consensus 244 ~~~~~fD~V~~~~vl~h 260 (351)
-.-+..|+++.+..+.+
T Consensus 82 ~~~G~iDiLVNNAG~~~ 98 (255)
T 4g81_D 82 AEGIHVDILINNAGIQY 98 (255)
T ss_dssp HTTCCCCEEEECCCCCC
T ss_pred HHCCCCcEEEECCCCCC
Confidence 12367999998765543
No 430
>1pqv_S STP-alpha, transcription elongation factor S-II, DNA; mRNA cleavage, proofreading, BACKTRACKING, gene expression, multiprotein complex; 3.80A {Saccharomyces cerevisiae} SCOP: i.8.1.1 PDB: 1eo0_A
Probab=83.91 E-value=0.38 Score=43.33 Aligned_cols=40 Identities=13% Similarity=0.369 Sum_probs=25.0
Q ss_pred CCceeCCCCCCCcc-cccCCCcccccccCCccccccccccc
Q 018740 69 KNVLACPICYKPLT-WIGDSSLSIESAAGSSLQCNTCKKTY 108 (351)
Q Consensus 69 ~~~l~CP~C~~~l~-~~~~~~~~~~~~~~~~~~C~~C~~~~ 108 (351)
...+.||.|+..-. .......+.++-....+.|.+|++.+
T Consensus 266 ~~~~~C~~C~~~~~~~~q~Q~rsaDe~~t~f~~C~~Cg~~w 306 (309)
T 1pqv_S 266 TDRFTCGKCKEKKVSYYQLQTRSADEPLTTFCTCEACGNRW 306 (309)
T ss_pred cccccCCCCCCCeeEEEEeecccCCCCCcEEEEeCCCCCce
Confidence 44689999998321 11112233455556678999999865
No 431
>3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A*
Probab=83.87 E-value=3.7 Score=36.22 Aligned_cols=104 Identities=18% Similarity=0.167 Sum_probs=66.6
Q ss_pred CCCeEEEEcCcc----CH-HHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHhhhCCCCCCCeEEEEecCCCCC-----C--
Q 018740 177 LGGNIIDASCGS----GL-FSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLP-----F-- 244 (351)
Q Consensus 177 ~~~~vLDiGcG~----G~-~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~g~~~~~i~~~~~d~~~lp-----~-- 244 (351)
.++++|=.|++. |. ++..|++.|. +|+.+|.++...+...+..... ..+.++.+|+.+.. +
T Consensus 29 ~~k~vlVTGasg~~GIG~~ia~~la~~G~--~V~~~~r~~~~~~~~~~~~~~~-----~~~~~~~~Dv~d~~~v~~~~~~ 101 (296)
T 3k31_A 29 EGKKGVIIGVANDKSLAWGIAKAVCAQGA--EVALTYLSETFKKRVDPLAESL-----GVKLTVPCDVSDAESVDNMFKV 101 (296)
T ss_dssp TTCEEEEECCCSTTSHHHHHHHHHHHTTC--EEEEEESSGGGHHHHHHHHHHH-----TCCEEEECCTTCHHHHHHHHHH
T ss_pred CCCEEEEEeCCCCCCHHHHHHHHHHHCCC--EEEEEeCChHHHHHHHHHHHhc-----CCeEEEEcCCCCHHHHHHHHHH
Confidence 367899999753 32 5666777776 9999999976555555444443 34678899987642 0
Q ss_pred ---CCCceeeEEeccccccC---------CCh--------------HHHHHHHHhcccCCcEEEEEeec
Q 018740 245 ---ASSSIDAVHAGAAIHCW---------SSP--------------STGVAEISRVLRPGGVFVGTTYI 287 (351)
Q Consensus 245 ---~~~~fD~V~~~~vl~h~---------~d~--------------~~~l~~i~~~LkpgG~li~~~~~ 287 (351)
.-+..|+++.+..+... .+. ..+++.+.+.++.+|.++.....
T Consensus 102 ~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~g~IV~isS~ 170 (296)
T 3k31_A 102 LAEEWGSLDFVVHAVAFSDKNELKGRYVDTSLGNFLTSMHISCYSFTYIASKAEPLMTNGGSILTLSYY 170 (296)
T ss_dssp HHHHHSCCSEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTTCEEEEEEECG
T ss_pred HHHHcCCCCEEEECCCcCCcccccCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCEEEEEEeh
Confidence 01468999987654321 111 13455666777788888776543
No 432
>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A
Probab=83.71 E-value=0.87 Score=41.87 Aligned_cols=101 Identities=17% Similarity=0.173 Sum_probs=57.5
Q ss_pred CCeEEEEcCcc-CHHHHHHHHh-CCCCeEEEEeCCHHHHHHHHHHHhhhCCCCCCCeEEEEecCCCCCCCCCceeeEEec
Q 018740 178 GGNIIDASCGS-GLFSRIFAKS-GLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLPFASSSIDAVHAG 255 (351)
Q Consensus 178 ~~~vLDiGcG~-G~~~~~l~~~-~~~~~v~gvD~s~~~~~~a~~~~~~~~g~~~~~i~~~~~d~~~lp~~~~~fD~V~~~ 255 (351)
+.+||=+|+|. |.....+++. |. +|+++|.++.-++.+++..... +.....+..++.-.-..+|+|+..
T Consensus 167 ~~~VlViGaGgvG~~aa~~a~~~Ga--~V~v~dr~~~r~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~DvVI~~ 237 (361)
T 1pjc_A 167 PGKVVILGGGVVGTEAAKMAVGLGA--QVQIFDINVERLSYLETLFGSR-------VELLYSNSAEIETAVAEADLLIGA 237 (361)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHGGG-------SEEEECCHHHHHHHHHTCSEEEEC
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCC--EEEEEeCCHHHHHHHHHhhCce-------eEeeeCCHHHHHHHHcCCCEEEEC
Confidence 47999999864 5544444443 54 9999999998888777653221 222211111111001258999865
Q ss_pred cccccCCChHHHHHHHHhcccCCcEEEEEeec
Q 018740 256 AAIHCWSSPSTGVAEISRVLRPGGVFVGTTYI 287 (351)
Q Consensus 256 ~vl~h~~d~~~~l~~i~~~LkpgG~li~~~~~ 287 (351)
-.......|.-+.++..+.++|||+++.....
T Consensus 238 ~~~~~~~~~~li~~~~~~~~~~g~~ivdv~~~ 269 (361)
T 1pjc_A 238 VLVPGRRAPILVPASLVEQMRTGSVIVDVAVD 269 (361)
T ss_dssp CCCTTSSCCCCBCHHHHTTSCTTCEEEETTCT
T ss_pred CCcCCCCCCeecCHHHHhhCCCCCEEEEEecC
Confidence 44332112211234566788999988775543
No 433
>1tfi_A Transcriptional elongation factor SII; transcription regulation; NMR {Homo sapiens} SCOP: g.41.3.1
Probab=83.67 E-value=0.32 Score=30.97 Aligned_cols=39 Identities=18% Similarity=0.463 Sum_probs=23.2
Q ss_pred CceeCCCCCCCcc-cccCCCcccccccCCccccccccccc
Q 018740 70 NVLACPICYKPLT-WIGDSSLSIESAAGSSLQCNTCKKTY 108 (351)
Q Consensus 70 ~~l~CP~C~~~l~-~~~~~~~~~~~~~~~~~~C~~C~~~~ 108 (351)
....||.|+..-. .-.....+.++-+.-.+.|.+|++.+
T Consensus 8 ~~~~Cp~Cg~~~a~f~q~Q~RsaDE~mT~Fy~C~~Cg~~w 47 (50)
T 1tfi_A 8 DLFTCGKCKKKNCTYTQVQTRSADEPMTTFVVCNECGNRW 47 (50)
T ss_dssp CCSCCSSSCSSCEEEEEECSSSSSSCCEEEEEESSSCCEE
T ss_pred CccCCCCCCCCEEEEEEecCcCCCCCceEEEEcCCCCCeE
Confidence 3468999998421 11112233444455578899999765
No 434
>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str}
Probab=83.08 E-value=5.4 Score=34.32 Aligned_cols=104 Identities=15% Similarity=0.129 Sum_probs=66.5
Q ss_pred CCCeEEEEcCccCH---HHHHHHHhCCCCeEEEE-eCCHHHHHHHHHHHhhhCCCCCCCeEEEEecCCCCC-----C---
Q 018740 177 LGGNIIDASCGSGL---FSRIFAKSGLFSLVVAL-DYSENMLKQCYEFVQQESNFPKENFLLVRADISRLP-----F--- 244 (351)
Q Consensus 177 ~~~~vLDiGcG~G~---~~~~l~~~~~~~~v~gv-D~s~~~~~~a~~~~~~~~g~~~~~i~~~~~d~~~lp-----~--- 244 (351)
.++++|=.|++.|. ++..|++.|. +|+.+ +.+....+...+.+... ..++.++.+|+.+.. +
T Consensus 7 ~~k~vlVTGas~GIG~aia~~la~~G~--~V~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~Dv~~~~~v~~~~~~~ 80 (259)
T 3edm_A 7 TNRTIVVAGAGRDIGRACAIRFAQEGA--NVVLTYNGAAEGAATAVAEIEKL----GRSALAIKADLTNAAEVEAAISAA 80 (259)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTC--EEEEEECSSCHHHHHHHHHHHTT----TSCCEEEECCTTCHHHHHHHHHHH
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC--EEEEEcCCCHHHHHHHHHHHHhc----CCceEEEEcCCCCHHHHHHHHHHH
Confidence 46689999987653 5566666776 88887 66666666666655544 467889999997642 0
Q ss_pred --CCCceeeEEeccccc-c---CCC--h--------------HHHHHHHHhcccCCcEEEEEee
Q 018740 245 --ASSSIDAVHAGAAIH-C---WSS--P--------------STGVAEISRVLRPGGVFVGTTY 286 (351)
Q Consensus 245 --~~~~fD~V~~~~vl~-h---~~d--~--------------~~~l~~i~~~LkpgG~li~~~~ 286 (351)
.-+..|+++.+.... . +.+ + ..+++.+.+.++++|.++....
T Consensus 81 ~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~g~iv~isS 144 (259)
T 3edm_A 81 ADKFGEIHGLVHVAGGLIARKTIAEMDEAFWHQVLDVNLTSLFLTAKTALPKMAKGGAIVTFSS 144 (259)
T ss_dssp HHHHCSEEEEEECCCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECC
T ss_pred HHHhCCCCEEEECCCccCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCEEEEEcC
Confidence 014689999776432 1 111 1 1345566667777787776554
No 435
>2akl_A PHNA-like protein PA0128; two domains, Zn binding protein, beta-strand protein, structural genomics, PSI; NMR {Pseudomonas aeruginosa PAO1} SCOP: b.34.11.2 g.41.3.5
Probab=82.51 E-value=0.5 Score=36.15 Aligned_cols=29 Identities=31% Similarity=0.772 Sum_probs=23.0
Q ss_pred ceeCCCCCCCcccccCCCcccccccCCcccccccccccc
Q 018740 71 VLACPICYKPLTWIGDSSLSIESAAGSSLQCNTCKKTYS 109 (351)
Q Consensus 71 ~l~CP~C~~~l~~~~~~~~~~~~~~~~~~~C~~C~~~~~ 109 (351)
+-.||.|++...-.. ...+.|+.|++.+.
T Consensus 27 lP~CP~C~seytYeD----------g~l~vCPeC~hEW~ 55 (138)
T 2akl_A 27 LPPCPQCNSEYTYED----------GALLVCPECAHEWS 55 (138)
T ss_dssp SCCCTTTCCCCCEEC----------SSSEEETTTTEEEC
T ss_pred CCCCCCCCCcceEec----------CCeEECCccccccC
Confidence 356999999876654 36789999999885
No 436
>3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} SCOP: c.2.1.0
Probab=82.47 E-value=9.2 Score=33.09 Aligned_cols=77 Identities=17% Similarity=0.228 Sum_probs=53.5
Q ss_pred CCCeEEEEcCccCH---HHHHHHHhCCCCeEEEEeC-------------CHHHHHHHHHHHhhhCCCCCCCeEEEEecCC
Q 018740 177 LGGNIIDASCGSGL---FSRIFAKSGLFSLVVALDY-------------SENMLKQCYEFVQQESNFPKENFLLVRADIS 240 (351)
Q Consensus 177 ~~~~vLDiGcG~G~---~~~~l~~~~~~~~v~gvD~-------------s~~~~~~a~~~~~~~~g~~~~~i~~~~~d~~ 240 (351)
.++++|=.|++.|. .+..|++.|. +|+.+|. +...++...+.+... ..++.++.+|+.
T Consensus 10 ~~k~~lVTGas~GIG~a~a~~la~~G~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~D~~ 83 (277)
T 3tsc_A 10 EGRVAFITGAARGQGRAHAVRMAAEGA--DIIAVDIAGKLPSCVPYDPASPDDLSETVRLVEAA----NRRIVAAVVDTR 83 (277)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTC--EEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHHT----TCCEEEEECCTT
T ss_pred CCCEEEEECCccHHHHHHHHHHHHcCC--EEEEEeccccccccccccccCHHHHHHHHHHHHhc----CCeEEEEECCCC
Confidence 36689999987653 5566677776 9999998 566666665555544 568899999997
Q ss_pred CCC-----CC-----CCceeeEEeccccc
Q 018740 241 RLP-----FA-----SSSIDAVHAGAAIH 259 (351)
Q Consensus 241 ~lp-----~~-----~~~fD~V~~~~vl~ 259 (351)
+.. +. -+..|+++.+..+.
T Consensus 84 ~~~~v~~~~~~~~~~~g~id~lvnnAg~~ 112 (277)
T 3tsc_A 84 DFDRLRKVVDDGVAALGRLDIIVANAGVA 112 (277)
T ss_dssp CHHHHHHHHHHHHHHHSCCCEEEECCCCC
T ss_pred CHHHHHHHHHHHHHHcCCCCEEEECCCCC
Confidence 642 00 14689999876553
No 437
>1gh9_A 8.3 kDa protein (gene MTH1184); beta+alpha complex structure, structural genomics, PSI, protein structure initiative; NMR {Methanothermobacterthermautotrophicus} SCOP: g.41.6.1
Probab=82.26 E-value=0.46 Score=32.63 Aligned_cols=30 Identities=20% Similarity=0.479 Sum_probs=21.6
Q ss_pred ceeCCCCCCCcccccCCCcccccccCCcccccccccccccc
Q 018740 71 VLACPICYKPLTWIGDSSLSIESAAGSSLQCNTCKKTYSGV 111 (351)
Q Consensus 71 ~l~CP~C~~~l~~~~~~~~~~~~~~~~~~~C~~C~~~~~~~ 111 (351)
++.|| |+..+.... .....+|+ ||......
T Consensus 4 vv~C~-C~~~~~~~~---------~~kT~~C~-CG~~~~~~ 33 (71)
T 1gh9_A 4 IFRCD-CGRALYSRE---------GAKTRKCV-CGRTVNVK 33 (71)
T ss_dssp EEEET-TSCCEEEET---------TCSEEEET-TTEEEECC
T ss_pred EEECC-CCCEEEEcC---------CCcEEECC-CCCeeeec
Confidence 47899 998765544 23678899 99876544
No 438
>3j21_g 50S ribosomal protein L40E; archaea, archaeal, KINK-turn, protein synthe ribosome; 6.60A {Pyrococcus furiosus}
Probab=82.03 E-value=0.6 Score=29.75 Aligned_cols=29 Identities=14% Similarity=0.236 Sum_probs=21.9
Q ss_pred cCCCceeCCCCCCCcccccCCCcccccccCCccccccccccc
Q 018740 67 TSKNVLACPICYKPLTWIGDSSLSIESAAGSSLQCNTCKKTY 108 (351)
Q Consensus 67 ~~~~~l~CP~C~~~l~~~~~~~~~~~~~~~~~~~C~~C~~~~ 108 (351)
...+...||.|++.+. .+...|..||+..
T Consensus 10 r~~~k~iCpkC~a~~~-------------~gaw~CrKCG~~~ 38 (51)
T 3j21_g 10 RIFKKYVCLRCGATNP-------------WGAKKCRKCGYKR 38 (51)
T ss_dssp HSSSEEECTTTCCEEC-------------TTCSSCSSSSSCC
T ss_pred HHhCCccCCCCCCcCC-------------CCceecCCCCCcc
Confidence 3456789999998732 3788999998763
No 439
>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}
Probab=81.97 E-value=0.94 Score=41.74 Aligned_cols=100 Identities=14% Similarity=0.182 Sum_probs=53.2
Q ss_pred CCCeEEEEcCcc-CHHHHHHH-HhCCCCeEEEEeCCHHHHHHHHHHHhhhCCCCCCCeEEEEecCCCCCCCCCceeeEEe
Q 018740 177 LGGNIIDASCGS-GLFSRIFA-KSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLPFASSSIDAVHA 254 (351)
Q Consensus 177 ~~~~vLDiGcG~-G~~~~~l~-~~~~~~~v~gvD~s~~~~~~a~~~~~~~~g~~~~~i~~~~~d~~~lp~~~~~fD~V~~ 254 (351)
++.+|+=+|+|. |......+ ..|. +|+++|.++..++.+++.. ...+.....+...+.-.-..+|+|+.
T Consensus 165 ~~~~V~ViGaG~iG~~~a~~l~~~Ga--~V~~~d~~~~~~~~~~~~~-------g~~~~~~~~~~~~l~~~~~~~DvVi~ 235 (369)
T 2eez_A 165 APASVVILGGGTVGTNAAKIALGMGA--QVTILDVNHKRLQYLDDVF-------GGRVITLTATEANIKKSVQHADLLIG 235 (369)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHT-------TTSEEEEECCHHHHHHHHHHCSEEEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCC--EEEEEECCHHHHHHHHHhc-------CceEEEecCCHHHHHHHHhCCCEEEE
Confidence 457999999863 44333333 3354 9999999998777665432 11222211111111100125799886
Q ss_pred ccccccCCChHHHHHHHHhcccCCcEEEEEe
Q 018740 255 GAAIHCWSSPSTGVAEISRVLRPGGVFVGTT 285 (351)
Q Consensus 255 ~~vl~h~~d~~~~l~~i~~~LkpgG~li~~~ 285 (351)
+-.......+.-+.+++.+.+++||+++...
T Consensus 236 ~~g~~~~~~~~li~~~~l~~mk~gg~iV~v~ 266 (369)
T 2eez_A 236 AVLVPGAKAPKLVTRDMLSLMKEGAVIVDVA 266 (369)
T ss_dssp CCC-------CCSCHHHHTTSCTTCEEEECC
T ss_pred CCCCCccccchhHHHHHHHhhcCCCEEEEEe
Confidence 5433211111112466778889999877654
No 440
>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli}
Probab=81.87 E-value=8.7 Score=33.64 Aligned_cols=101 Identities=17% Similarity=0.124 Sum_probs=68.7
Q ss_pred CCCeEEEEcCccCH---HHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHhhhCCCCCCCeEEEEecCCCCC----------
Q 018740 177 LGGNIIDASCGSGL---FSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLP---------- 243 (351)
Q Consensus 177 ~~~~vLDiGcG~G~---~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~g~~~~~i~~~~~d~~~lp---------- 243 (351)
.++.+|=-|.+.|. .+..|++.|. +|+.+|.+++.++.+.+.+ ..+...+.+|+.+..
T Consensus 28 ~gKvalVTGas~GIG~aiA~~la~~Ga--~V~i~~r~~~~l~~~~~~~-------g~~~~~~~~Dv~~~~~v~~~~~~~~ 98 (273)
T 4fgs_A 28 NAKIAVITGATSGIGLAAAKRFVAEGA--RVFITGRRKDVLDAAIAEI-------GGGAVGIQADSANLAELDRLYEKVK 98 (273)
T ss_dssp TTCEEEEESCSSHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHH-------CTTCEEEECCTTCHHHHHHHHHHHH
T ss_pred CCCEEEEeCcCCHHHHHHHHHHHHCCC--EEEEEECCHHHHHHHHHHc-------CCCeEEEEecCCCHHHHHHHHHHHH
Confidence 46788988987764 5666777776 9999999998877665543 346778889987642
Q ss_pred CCCCceeeEEeccccccCC---C----------------hHHHHHHHHhcccCCcEEEEEee
Q 018740 244 FASSSIDAVHAGAAIHCWS---S----------------PSTGVAEISRVLRPGGVFVGTTY 286 (351)
Q Consensus 244 ~~~~~fD~V~~~~vl~h~~---d----------------~~~~l~~i~~~LkpgG~li~~~~ 286 (351)
-.-+..|+++.+....... + +-...+.+.+.|+.+|.++....
T Consensus 99 ~~~G~iDiLVNNAG~~~~~~~~~~~~e~w~~~~~vNl~g~~~~~~~~~p~m~~~G~IInisS 160 (273)
T 4fgs_A 99 AEAGRIDVLFVNAGGGSMLPLGEVTEEQYDDTFDRNVKGVLFTVQKALPLLARGSSVVLTGS 160 (273)
T ss_dssp HHHSCEEEEEECCCCCCCCCTTSCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEECC
T ss_pred HHcCCCCEEEECCCCCCCCChhhccHHHHHHHHHHHhHHHHHHHHHHHHHHhhCCeEEEEee
Confidence 1125789998776543321 1 12445677788888888776554
No 441
>4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis}
Probab=81.74 E-value=8.5 Score=33.15 Aligned_cols=77 Identities=18% Similarity=0.196 Sum_probs=54.3
Q ss_pred CCCeEEEEcCccCH---HHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHhh-hCCCCCCCeEEEEecCCCCCC--------
Q 018740 177 LGGNIIDASCGSGL---FSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQ-ESNFPKENFLLVRADISRLPF-------- 244 (351)
Q Consensus 177 ~~~~vLDiGcG~G~---~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~-~~g~~~~~i~~~~~d~~~lp~-------- 244 (351)
.++++|=.|++.|. .+..|++.|. +|+.++.++..++.+.+.+.. . ..++.++.+|+.+..-
T Consensus 19 ~~k~vlVTGas~gIG~aia~~l~~~G~--~V~~~~r~~~~~~~~~~~l~~~~----~~~~~~~~~Dv~~~~~v~~~~~~~ 92 (266)
T 4egf_A 19 DGKRALITGATKGIGADIARAFAAAGA--RLVLSGRDVSELDAARRALGEQF----GTDVHTVAIDLAEPDAPAELARRA 92 (266)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHHHHH----CCCEEEEECCTTSTTHHHHHHHHH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHHHhc----CCcEEEEEecCCCHHHHHHHHHHH
Confidence 35688888876553 4556666676 999999998888777666554 3 4678999999977531
Q ss_pred --CCCceeeEEeccccc
Q 018740 245 --ASSSIDAVHAGAAIH 259 (351)
Q Consensus 245 --~~~~fD~V~~~~vl~ 259 (351)
..+..|+++.+..+.
T Consensus 93 ~~~~g~id~lv~nAg~~ 109 (266)
T 4egf_A 93 AEAFGGLDVLVNNAGIS 109 (266)
T ss_dssp HHHHTSCSEEEEECCCC
T ss_pred HHHcCCCCEEEECCCcC
Confidence 013689999876543
No 442
>1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2
Probab=81.71 E-value=6.1 Score=33.90 Aligned_cols=77 Identities=18% Similarity=0.216 Sum_probs=49.3
Q ss_pred CCCeEEEEcCccC---HHHHHHHHhCCCCeEEEEeC-CHHHHHHHHHHHhhhCCCCCCCeEEEEecCCCCC-----CC--
Q 018740 177 LGGNIIDASCGSG---LFSRIFAKSGLFSLVVALDY-SENMLKQCYEFVQQESNFPKENFLLVRADISRLP-----FA-- 245 (351)
Q Consensus 177 ~~~~vLDiGcG~G---~~~~~l~~~~~~~~v~gvD~-s~~~~~~a~~~~~~~~g~~~~~i~~~~~d~~~lp-----~~-- 245 (351)
.+++||=.|++.| .++..|++.|. +|++++. ++..++...+.+... ..++.++.+|+.+.. +.
T Consensus 20 ~~k~vlItGasggiG~~la~~l~~~G~--~v~~~~r~~~~~~~~~~~~l~~~----~~~~~~~~~D~~~~~~~~~~~~~~ 93 (274)
T 1ja9_A 20 AGKVALTTGAGRGIGRGIAIELGRRGA--SVVVNYGSSSKAAEEVVAELKKL----GAQGVAIQADISKPSEVVALFDKA 93 (274)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHTTC--EEEEEESSCHHHHHHHHHHHHHT----TCCEEEEECCTTSHHHHHHHHHHH
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCC--EEEEEcCCchHHHHHHHHHHHhc----CCcEEEEEecCCCHHHHHHHHHHH
Confidence 3568887776433 13445555665 8999998 776666555555443 467889999987642 00
Q ss_pred ---CCceeeEEeccccc
Q 018740 246 ---SSSIDAVHAGAAIH 259 (351)
Q Consensus 246 ---~~~fD~V~~~~vl~ 259 (351)
-+.+|+|+.+....
T Consensus 94 ~~~~~~~d~vi~~Ag~~ 110 (274)
T 1ja9_A 94 VSHFGGLDFVMSNSGME 110 (274)
T ss_dssp HHHHSCEEEEECCCCCC
T ss_pred HHHcCCCCEEEECCCCC
Confidence 13689999776543
No 443
>3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.2
Probab=81.50 E-value=11 Score=32.18 Aligned_cols=106 Identities=10% Similarity=0.090 Sum_probs=65.9
Q ss_pred CCCCCeEEEEcCc--cCH---HHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHhhhCCCCCCCeEEEEecCCCCC------
Q 018740 175 PVLGGNIIDASCG--SGL---FSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLP------ 243 (351)
Q Consensus 175 ~~~~~~vLDiGcG--~G~---~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~g~~~~~i~~~~~d~~~lp------ 243 (351)
...+++||=.|++ .|. ++..|++.|. +|+.++.+....+.+++..... .++.++.+|+.+..
T Consensus 11 ~~~~k~vlITGa~~~~giG~~ia~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~-----~~~~~~~~Dv~~~~~v~~~~ 83 (271)
T 3ek2_A 11 FLDGKRILLTGLLSNRSIAYGIAKACKREGA--ELAFTYVGDRFKDRITEFAAEF-----GSELVFPCDVADDAQIDALF 83 (271)
T ss_dssp TTTTCEEEECCCCSTTSHHHHHHHHHHHTTC--EEEEEESSGGGHHHHHHHHHHT-----TCCCEEECCTTCHHHHHHHH
T ss_pred ccCCCEEEEeCCCCCCcHHHHHHHHHHHcCC--CEEEEecchhhHHHHHHHHHHc-----CCcEEEECCCCCHHHHHHHH
Confidence 3457799999965 332 4556666676 9999998865555444433332 45788999987642
Q ss_pred ----CCCCceeeEEeccccccC----------CCh--------------HHHHHHHHhcccCCcEEEEEeec
Q 018740 244 ----FASSSIDAVHAGAAIHCW----------SSP--------------STGVAEISRVLRPGGVFVGTTYI 287 (351)
Q Consensus 244 ----~~~~~fD~V~~~~vl~h~----------~d~--------------~~~l~~i~~~LkpgG~li~~~~~ 287 (351)
-..+..|+++.+..+... .++ ..+++.+.+.++++|.++.....
T Consensus 84 ~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~isS~ 155 (271)
T 3ek2_A 84 ASLKTHWDSLDGLVHSIGFAPREAIAGDFLDGLTRENFRIAHDISAYSFPALAKAALPMLSDDASLLTLSYL 155 (271)
T ss_dssp HHHHHHCSCEEEEEECCCCCCGGGGSSCTTTTCCHHHHHHHHHHHTTHHHHHHHHHGGGEEEEEEEEEEECG
T ss_pred HHHHHHcCCCCEEEECCccCccccccCccccccCHHHHHHHHhhhHHHHHHHHHHHHHHhccCceEEEEecc
Confidence 012478999987654321 111 13455666677778887765543
No 444
>3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp}
Probab=81.47 E-value=6.5 Score=34.05 Aligned_cols=78 Identities=19% Similarity=0.220 Sum_probs=54.1
Q ss_pred CCCeEEEEcCccCH---HHHHHHHhCCCCeEEEEeCC------------HHHHHHHHHHHhhhCCCCCCCeEEEEecCCC
Q 018740 177 LGGNIIDASCGSGL---FSRIFAKSGLFSLVVALDYS------------ENMLKQCYEFVQQESNFPKENFLLVRADISR 241 (351)
Q Consensus 177 ~~~~vLDiGcG~G~---~~~~l~~~~~~~~v~gvD~s------------~~~~~~a~~~~~~~~g~~~~~i~~~~~d~~~ 241 (351)
.++++|=.|++.|. .+..|++.|. +|+.+|.+ .+.++...+.+... ..++.++.+|+.+
T Consensus 12 ~gk~vlVTGas~gIG~~ia~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~D~~~ 85 (278)
T 3sx2_A 12 TGKVAFITGAARGQGRAHAVRLAADGA--DIIAVDLCDQIASVPYPLATPEELAATVKLVEDI----GSRIVARQADVRD 85 (278)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTC--EEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHH----TCCEEEEECCTTC
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCC--eEEEEecccccccccccccchHHHHHHHHHHHhc----CCeEEEEeCCCCC
Confidence 46789999976552 5566667776 99999987 66666655555554 5689999999976
Q ss_pred CC-----C-----CCCceeeEEecccccc
Q 018740 242 LP-----F-----ASSSIDAVHAGAAIHC 260 (351)
Q Consensus 242 lp-----~-----~~~~fD~V~~~~vl~h 260 (351)
.. + .-+..|+++.+..+..
T Consensus 86 ~~~v~~~~~~~~~~~g~id~lv~nAg~~~ 114 (278)
T 3sx2_A 86 RESLSAALQAGLDELGRLDIVVANAGIAP 114 (278)
T ss_dssp HHHHHHHHHHHHHHHCCCCEEEECCCCCC
T ss_pred HHHHHHHHHHHHHHcCCCCEEEECCCCCC
Confidence 42 0 0146899998776543
No 445
>3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti}
Probab=81.46 E-value=7.2 Score=33.76 Aligned_cols=104 Identities=18% Similarity=0.183 Sum_probs=66.1
Q ss_pred CCCeEEEEcCccCH---HHHHHHHhCCCCeEEEEe-CCHHHHHHHHHHHhhhCCCCCCCeEEEEecCCCCCC--------
Q 018740 177 LGGNIIDASCGSGL---FSRIFAKSGLFSLVVALD-YSENMLKQCYEFVQQESNFPKENFLLVRADISRLPF-------- 244 (351)
Q Consensus 177 ~~~~vLDiGcG~G~---~~~~l~~~~~~~~v~gvD-~s~~~~~~a~~~~~~~~g~~~~~i~~~~~d~~~lp~-------- 244 (351)
.++++|=.|++.|. .+..|++.|. +|+.++ .+....+...+.+... ..++.++.+|+.+..-
T Consensus 26 ~~k~~lVTGas~GIG~aia~~la~~G~--~Vv~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~Dl~~~~~v~~~~~~~ 99 (267)
T 3u5t_A 26 TNKVAIVTGASRGIGAAIAARLASDGF--TVVINYAGKAAAAEEVAGKIEAA----GGKALTAQADVSDPAAVRRLFATA 99 (267)
T ss_dssp -CCEEEEESCSSHHHHHHHHHHHHHTC--EEEEEESSCSHHHHHHHHHHHHT----TCCEEEEECCTTCHHHHHHHHHHH
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCC--EEEEEcCCCHHHHHHHHHHHHhc----CCeEEEEEcCCCCHHHHHHHHHHH
Confidence 36689989987653 5566677776 888774 4555555555555544 4678899999976420
Q ss_pred --CCCceeeEEeccccccCC-----Ch--------------HHHHHHHHhcccCCcEEEEEee
Q 018740 245 --ASSSIDAVHAGAAIHCWS-----SP--------------STGVAEISRVLRPGGVFVGTTY 286 (351)
Q Consensus 245 --~~~~fD~V~~~~vl~h~~-----d~--------------~~~l~~i~~~LkpgG~li~~~~ 286 (351)
..+..|+++.+..+.... ++ ..+++.+.+.++++|.++....
T Consensus 100 ~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~g~iv~isS 162 (267)
T 3u5t_A 100 EEAFGGVDVLVNNAGIMPLTTIAETGDAVFDRVIAVNLKGTFNTLREAAQRLRVGGRIINMST 162 (267)
T ss_dssp HHHHSCEEEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECC
T ss_pred HHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCeEEEEeC
Confidence 014799999876543321 11 1345566777777888777653
No 446
>1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=80.54 E-value=8.4 Score=33.90 Aligned_cols=79 Identities=24% Similarity=0.329 Sum_probs=50.9
Q ss_pred CCCeEEEEcCccCH---HHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHhhhCCCCCCCeEEEEecCCCCC-----CC---
Q 018740 177 LGGNIIDASCGSGL---FSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLP-----FA--- 245 (351)
Q Consensus 177 ~~~~vLDiGcG~G~---~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~g~~~~~i~~~~~d~~~lp-----~~--- 245 (351)
.++++|=.|++.|. ++..|++.|. +|+.++.++..++...+.+... +....++.++.+|+.+.. +.
T Consensus 25 ~~k~vlVTGas~gIG~aia~~L~~~G~--~V~~~~r~~~~~~~~~~~l~~~-~~~~~~~~~~~~Dv~d~~~v~~~~~~~~ 101 (297)
T 1xhl_A 25 SGKSVIITGSSNGIGRSAAVIFAKEGA--QVTITGRNEDRLEETKQQILKA-GVPAEKINAVVADVTEASGQDDIINTTL 101 (297)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHHHT-TCCGGGEEEEECCTTSHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHHhc-CCCCceEEEEecCCCCHHHHHHHHHHHH
Confidence 35678888865542 4455566666 9999999988776665555443 100117889999987642 00
Q ss_pred --CCceeeEEecccc
Q 018740 246 --SSSIDAVHAGAAI 258 (351)
Q Consensus 246 --~~~fD~V~~~~vl 258 (351)
-+..|+++.+..+
T Consensus 102 ~~~g~iD~lvnnAG~ 116 (297)
T 1xhl_A 102 AKFGKIDILVNNAGA 116 (297)
T ss_dssp HHHSCCCEEEECCCC
T ss_pred HhcCCCCEEEECCCc
Confidence 1368999987654
No 447
>3ce6_A Adenosylhomocysteinase; protein-substrate complex, dimer of dimers, NAD binding DOMA amino acid insertional region, hydrolase; HET: ADN NAD; 1.60A {Mycobacterium tuberculosis} PDB: 3dhy_A* 2zj0_A* 2ziz_A* 2zj1_A*
Probab=80.09 E-value=4.3 Score=38.92 Aligned_cols=90 Identities=11% Similarity=0.012 Sum_probs=54.8
Q ss_pred CCCCCeEEEEcCcc-CHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHhhhCCCCCCCeEEEEecCCCCCCCCCceeeEE
Q 018740 175 PVLGGNIIDASCGS-GLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLPFASSSIDAVH 253 (351)
Q Consensus 175 ~~~~~~vLDiGcG~-G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~g~~~~~i~~~~~d~~~lp~~~~~fD~V~ 253 (351)
..++.+|+=+|+|. |......++.. +.+|+++|.++...+.+++. .+.. .++.++ -...|+|+
T Consensus 271 ~l~GktV~IiG~G~IG~~~A~~lka~-Ga~Viv~d~~~~~~~~A~~~----------Ga~~--~~l~e~---l~~aDvVi 334 (494)
T 3ce6_A 271 LIGGKKVLICGYGDVGKGCAEAMKGQ-GARVSVTEIDPINALQAMME----------GFDV--VTVEEA---IGDADIVV 334 (494)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHT-TCEEEEECSCHHHHHHHHHT----------TCEE--CCHHHH---GGGCSEEE
T ss_pred CCCcCEEEEEccCHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHHc----------CCEE--ecHHHH---HhCCCEEE
Confidence 34688999999875 65554444432 24999999999877666542 2222 222221 13579998
Q ss_pred eccccccCCChHHHHHHHHhcccCCcEEEEEe
Q 018740 254 AGAAIHCWSSPSTGVAEISRVLRPGGVFVGTT 285 (351)
Q Consensus 254 ~~~vl~h~~d~~~~l~~i~~~LkpgG~li~~~ 285 (351)
..-.-.++-+ .+..+.+|+||+++...
T Consensus 335 ~atgt~~~i~-----~~~l~~mk~ggilvnvG 361 (494)
T 3ce6_A 335 TATGNKDIIM-----LEHIKAMKDHAILGNIG 361 (494)
T ss_dssp ECSSSSCSBC-----HHHHHHSCTTCEEEECS
T ss_pred ECCCCHHHHH-----HHHHHhcCCCcEEEEeC
Confidence 7533233211 25566789999887643
No 448
>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius}
Probab=79.84 E-value=8.2 Score=33.41 Aligned_cols=76 Identities=29% Similarity=0.361 Sum_probs=57.4
Q ss_pred CCCeEEEEcCccCH---HHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHhhhCCCCCCCeEEEEecCCCCC----------
Q 018740 177 LGGNIIDASCGSGL---FSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLP---------- 243 (351)
Q Consensus 177 ~~~~vLDiGcG~G~---~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~g~~~~~i~~~~~d~~~lp---------- 243 (351)
+++.+|=-|.+.|. .+..|++.|. +|+.+|.+++.++...+.+... ..++.++.+|+.+..
T Consensus 6 ~gKvalVTGas~GIG~aiA~~la~~Ga--~Vv~~~~~~~~~~~~~~~i~~~----g~~~~~~~~Dvt~~~~v~~~~~~~~ 79 (254)
T 4fn4_A 6 KNKVVIVTGAGSGIGRAIAKKFALNDS--IVVAVELLEDRLNQIVQELRGM----GKEVLGVKADVSKKKDVEEFVRRTF 79 (254)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHHHT----TCCEEEEECCTTSHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHcCC--EEEEEECCHHHHHHHHHHHHhc----CCcEEEEEccCCCHHHHHHHHHHHH
Confidence 36788888987764 4566677776 9999999999888888877766 578899999997642
Q ss_pred CCCCceeeEEecccc
Q 018740 244 FASSSIDAVHAGAAI 258 (351)
Q Consensus 244 ~~~~~fD~V~~~~vl 258 (351)
-.-+..|+++.+..+
T Consensus 80 ~~~G~iDiLVNNAGi 94 (254)
T 4fn4_A 80 ETYSRIDVLCNNAGI 94 (254)
T ss_dssp HHHSCCCEEEECCCC
T ss_pred HHcCCCCEEEECCcc
Confidence 112578999987653
No 449
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=79.46 E-value=9.7 Score=35.50 Aligned_cols=93 Identities=17% Similarity=0.250 Sum_probs=61.9
Q ss_pred CCeEEEEcCcc-CH-HHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHhhhCCCCCCCeEEEEecCCCCC----CCCCceee
Q 018740 178 GGNIIDASCGS-GL-FSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLP----FASSSIDA 251 (351)
Q Consensus 178 ~~~vLDiGcG~-G~-~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~g~~~~~i~~~~~d~~~lp----~~~~~fD~ 251 (351)
..+|+=+|+|. |. .+..|.+.+. .|+++|.++..++.+++ ..+.++.+|..+.. ..-...|+
T Consensus 4 ~~~viIiG~Gr~G~~va~~L~~~g~--~vvvId~d~~~v~~~~~----------~g~~vi~GDat~~~~L~~agi~~A~~ 71 (413)
T 3l9w_A 4 GMRVIIAGFGRFGQITGRLLLSSGV--KMVVLDHDPDHIETLRK----------FGMKVFYGDATRMDLLESAGAAKAEV 71 (413)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTC--CEEEEECCHHHHHHHHH----------TTCCCEESCTTCHHHHHHTTTTTCSE
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCC--CEEEEECCHHHHHHHHh----------CCCeEEEcCCCCHHHHHhcCCCccCE
Confidence 35788898875 44 3334444555 89999999999988875 24567889987642 12346788
Q ss_pred EEeccccccCCChH--HHHHHHHhcccCCcEEEEEeec
Q 018740 252 VHAGAAIHCWSSPS--TGVAEISRVLRPGGVFVGTTYI 287 (351)
Q Consensus 252 V~~~~vl~h~~d~~--~~l~~i~~~LkpgG~li~~~~~ 287 (351)
|++.. ++.. ..+....+.+.|+..++.....
T Consensus 72 viv~~-----~~~~~n~~i~~~ar~~~p~~~Iiara~~ 104 (413)
T 3l9w_A 72 LINAI-----DDPQTNLQLTEMVKEHFPHLQIIARARD 104 (413)
T ss_dssp EEECC-----SSHHHHHHHHHHHHHHCTTCEEEEEESS
T ss_pred EEECC-----CChHHHHHHHHHHHHhCCCCeEEEEECC
Confidence 77533 3433 4456667778898888876643
No 450
>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}
Probab=78.22 E-value=0.73 Score=42.68 Aligned_cols=97 Identities=20% Similarity=0.172 Sum_probs=56.5
Q ss_pred CCCeEEEEcCcc-CHHHHHHHH-hCCCCeEEEEeCCHHHHHHHHHHHhhhCCCCCCCeEEEEec---------C------
Q 018740 177 LGGNIIDASCGS-GLFSRIFAK-SGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRAD---------I------ 239 (351)
Q Consensus 177 ~~~~vLDiGcG~-G~~~~~l~~-~~~~~~v~gvD~s~~~~~~a~~~~~~~~g~~~~~i~~~~~d---------~------ 239 (351)
++.+|+=+|+|. |.....+++ .|. +|+++|.++..++.+++. +..++..+ .
T Consensus 183 ~~~kV~ViG~G~iG~~aa~~a~~lGa--~V~v~D~~~~~l~~~~~l----------Ga~~~~l~~~~~~~~gya~~~~~~ 250 (381)
T 3p2y_A 183 KPASALVLGVGVAGLQALATAKRLGA--KTTGYDVRPEVAEQVRSV----------GAQWLDLGIDAAGEGGYARELSEA 250 (381)
T ss_dssp CCCEEEEESCSHHHHHHHHHHHHHTC--EEEEECSSGGGHHHHHHT----------TCEECCCC-------------CHH
T ss_pred CCCEEEEECchHHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHc----------CCeEEeccccccccccchhhhhHH
Confidence 567999999986 655544444 454 999999999887777652 11222111 0
Q ss_pred ------CCCCCCCCceeeEEeccccccCCChHHHHHHHHhcccCCcEEEEEe
Q 018740 240 ------SRLPFASSSIDAVHAGAAIHCWSSPSTGVAEISRVLRPGGVFVGTT 285 (351)
Q Consensus 240 ------~~lp~~~~~fD~V~~~~vl~h~~d~~~~l~~i~~~LkpgG~li~~~ 285 (351)
..+.-.-...|+|+..-.+..-..|.-+-+++.+.+|||++++-..
T Consensus 251 ~~~~~~~~l~e~l~~aDIVI~tv~iPg~~ap~Lvt~emv~~MkpGsVIVDvA 302 (381)
T 3p2y_A 251 ERAQQQQALEDAITKFDIVITTALVPGRPAPRLVTAAAATGMQPGSVVVDLA 302 (381)
T ss_dssp HHHHHHHHHHHHHTTCSEEEECCCCTTSCCCCCBCHHHHHTSCTTCEEEETT
T ss_pred HHhhhHHHHHHHHhcCCEEEECCCCCCcccceeecHHHHhcCCCCcEEEEEe
Confidence 0010011468999965322211122223467888899988777543
No 451
>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}
Probab=78.01 E-value=1.2 Score=41.47 Aligned_cols=42 Identities=21% Similarity=0.117 Sum_probs=31.6
Q ss_pred CCCeEEEEcCcc-CHHHHHHHHhCCCCeEEEEeCCHHHHHHHHH
Q 018740 177 LGGNIIDASCGS-GLFSRIFAKSGLFSLVVALDYSENMLKQCYE 219 (351)
Q Consensus 177 ~~~~vLDiGcG~-G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~ 219 (351)
++.+|+=+|+|. |.....++... +.+|+++|.++..++.+++
T Consensus 189 ~~~kV~ViG~G~iG~~aa~~a~~l-Ga~V~v~D~~~~~l~~~~~ 231 (405)
T 4dio_A 189 PAAKIFVMGAGVAGLQAIATARRL-GAVVSATDVRPAAKEQVAS 231 (405)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHT-TCEEEEECSSTTHHHHHHH
T ss_pred CCCEEEEECCcHHHHHHHHHHHHC-CCEEEEEcCCHHHHHHHHH
Confidence 467999999986 66555555442 3499999999988877765
No 452
>1zcj_A Peroxisomal bifunctional enzyme; peroxisomal multifunctional enzyme type 1, L-bifunction enzyme, MFE-1, fatty acid beta oxidation; 1.90A {Rattus norvegicus}
Probab=77.85 E-value=13 Score=35.12 Aligned_cols=95 Identities=20% Similarity=0.279 Sum_probs=57.8
Q ss_pred CCeEEEEcCcc-CH-HHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHhhh------CC------CCCCCeEEEEecCCCCC
Q 018740 178 GGNIIDASCGS-GL-FSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQE------SN------FPKENFLLVRADISRLP 243 (351)
Q Consensus 178 ~~~vLDiGcG~-G~-~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~------~g------~~~~~i~~~~~d~~~lp 243 (351)
-.+|.-||+|. |. ++..+++.|. +|+++|.+++.++.+++.+... .| .......+ ..|...+
T Consensus 37 ~~kV~VIGaG~MG~~iA~~la~~G~--~V~l~D~~~~~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i-~~~~~~~- 112 (463)
T 1zcj_A 37 VSSVGVLGLGTMGRGIAISFARVGI--SVVAVESDPKQLDAAKKIITFTLEKEASRAHQNGQASAKPKLRF-SSSTKEL- 112 (463)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTTTC--EEEEECSSHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCCEEE-ESCGGGG-
T ss_pred CCEEEEECcCHHHHHHHHHHHhCCC--eEEEEECCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhhh-cCCHHHH-
Confidence 35799999987 44 5566667776 9999999999888776533210 00 00011222 3344221
Q ss_pred CCCCceeeEEeccccccCCCh---HHHHHHHHhcccCCcEEEE
Q 018740 244 FASSSIDAVHAGAAIHCWSSP---STGVAEISRVLRPGGVFVG 283 (351)
Q Consensus 244 ~~~~~fD~V~~~~vl~h~~d~---~~~l~~i~~~LkpgG~li~ 283 (351)
...|+|+..-. .+. ..+++++...++|+.+++.
T Consensus 113 ---~~aDlVIeaVp----e~~~~k~~v~~~l~~~~~~~~ii~s 148 (463)
T 1zcj_A 113 ---STVDLVVEAVF----EDMNLKKKVFAELSALCKPGAFLCT 148 (463)
T ss_dssp ---TTCSEEEECCC----SCHHHHHHHHHHHHHHSCTTCEEEE
T ss_pred ---CCCCEEEEcCC----CCHHHHHHHHHHHHhhCCCCeEEEe
Confidence 34788885332 132 4678888888988876654
No 453
>3jyw_9 60S ribosomal protein L43; eukaryotic ribosome, RACK1 protein, flexible fitting; 8.90A {Thermomyces lanuginosus}
Probab=77.77 E-value=1.5 Score=30.04 Aligned_cols=31 Identities=29% Similarity=0.504 Sum_probs=22.1
Q ss_pred CceeCCCCCCCcccccCCCcccccccCCcccccccccccc
Q 018740 70 NVLACPICYKPLTWIGDSSLSIESAAGSSLQCNTCKKTYS 109 (351)
Q Consensus 70 ~~l~CP~C~~~l~~~~~~~~~~~~~~~~~~~C~~C~~~~~ 109 (351)
..+.||.|+..-... ...++..|..|+..+.
T Consensus 25 ~ky~C~fCgk~~vkR---------~a~GIW~C~~C~~~~A 55 (72)
T 3jyw_9 25 ARYDCSFCGKKTVKR---------GAAGIWTCSCCKKTVA 55 (72)
T ss_dssp SCBCCSSCCSSCBSB---------CSSSCBCCSSSCCCCC
T ss_pred cCccCCCCCCceeEe---------cCCCeEECCCCCCEEe
Confidence 448899999863222 2358899999987654
No 454
>3h0g_I DNA-directed RNA polymerases I, II, and III subunit rpabc5; transcription, multi-protein complex, DNA- binding, magnesium; 3.65A {Schizosaccharomyces pombe}
Probab=77.57 E-value=1.6 Score=32.84 Aligned_cols=38 Identities=18% Similarity=0.232 Sum_probs=26.5
Q ss_pred ceeCCCCCCCcccccCCCcccccccCCccccccccccccccCc
Q 018740 71 VLACPICYKPLTWIGDSSLSIESAAGSSLQCNTCKKTYSGVGT 113 (351)
Q Consensus 71 ~l~CP~C~~~l~~~~~~~~~~~~~~~~~~~C~~C~~~~~~~~g 113 (351)
+.-||.|+..|....... .....+.|.+|+..+.+...
T Consensus 4 m~FCp~Cgn~L~~~~~~~-----~~~~~~~C~~C~y~~~~~~~ 41 (113)
T 3h0g_I 4 FQYCIECNNMLYPREDKV-----DRVLRLACRNCDYSEIAATS 41 (113)
T ss_dssp CCCCSSSCCCCEECCCTT-----TCCCCEECSSSCCEECCSCS
T ss_pred ceeCcCCCCEeeEcccCC-----CCeeEEECCCCCCeEEcCCC
Confidence 567999999887664210 12347899999988876643
No 455
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=77.54 E-value=20 Score=26.79 Aligned_cols=88 Identities=15% Similarity=0.186 Sum_probs=52.1
Q ss_pred CeEEEEcCcc-CH-HHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHhhhCCCCCCCeEEEEecCCCCC----CCCCceeeE
Q 018740 179 GNIIDASCGS-GL-FSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLP----FASSSIDAV 252 (351)
Q Consensus 179 ~~vLDiGcG~-G~-~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~g~~~~~i~~~~~d~~~lp----~~~~~fD~V 252 (351)
.+|+=+|+|. |. ++..|.+.+. +|+.+|.++..++..++. .++.++.+|..+.. ..-..+|+|
T Consensus 5 m~i~IiG~G~iG~~~a~~L~~~g~--~v~~~d~~~~~~~~~~~~---------~~~~~~~~d~~~~~~l~~~~~~~~d~v 73 (140)
T 1lss_A 5 MYIIIAGIGRVGYTLAKSLSEKGH--DIVLIDIDKDICKKASAE---------IDALVINGDCTKIKTLEDAGIEDADMY 73 (140)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHH---------CSSEEEESCTTSHHHHHHTTTTTCSEE
T ss_pred CEEEEECCCHHHHHHHHHHHhCCC--eEEEEECCHHHHHHHHHh---------cCcEEEEcCCCCHHHHHHcCcccCCEE
Confidence 4788888864 33 3344455554 899999998876655432 24456677764321 112458988
Q ss_pred EeccccccCCCh--HHHHHHHHhcccCCcEEEE
Q 018740 253 HAGAAIHCWSSP--STGVAEISRVLRPGGVFVG 283 (351)
Q Consensus 253 ~~~~vl~h~~d~--~~~l~~i~~~LkpgG~li~ 283 (351)
+..- ++. ...+..+.+.+.++ .++.
T Consensus 74 i~~~-----~~~~~~~~~~~~~~~~~~~-~ii~ 100 (140)
T 1lss_A 74 IAVT-----GKEEVNLMSSLLAKSYGIN-KTIA 100 (140)
T ss_dssp EECC-----SCHHHHHHHHHHHHHTTCC-CEEE
T ss_pred EEee-----CCchHHHHHHHHHHHcCCC-EEEE
Confidence 8653 232 23455566667775 4444
No 456
>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis}
Probab=77.18 E-value=13 Score=32.34 Aligned_cols=75 Identities=21% Similarity=0.238 Sum_probs=52.2
Q ss_pred CCCeEEEEcCccCH---HHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHhhhCCCCCCCeEEEEecCCCCCC---------
Q 018740 177 LGGNIIDASCGSGL---FSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLPF--------- 244 (351)
Q Consensus 177 ~~~~vLDiGcG~G~---~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~g~~~~~i~~~~~d~~~lp~--------- 244 (351)
.++++|=.|++.|. .+..|++.|. +|+.+|.++..++...+.+ ..++.++.+|+.+..-
T Consensus 28 ~gk~vlVTGas~gIG~aia~~la~~G~--~V~~~~r~~~~~~~~~~~~-------~~~~~~~~~Dv~d~~~v~~~~~~~~ 98 (277)
T 3gvc_A 28 AGKVAIVTGAGAGIGLAVARRLADEGC--HVLCADIDGDAADAAATKI-------GCGAAACRVDVSDEQQIIAMVDACV 98 (277)
T ss_dssp TTCEEEETTTTSTHHHHHHHHHHHTTC--EEEEEESSHHHHHHHHHHH-------CSSCEEEECCTTCHHHHHHHHHHHH
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHc-------CCcceEEEecCCCHHHHHHHHHHHH
Confidence 36688888887663 5566677776 9999999987766655543 3567889999876420
Q ss_pred -CCCceeeEEecccccc
Q 018740 245 -ASSSIDAVHAGAAIHC 260 (351)
Q Consensus 245 -~~~~fD~V~~~~vl~h 260 (351)
.-+..|+++.+..+.+
T Consensus 99 ~~~g~iD~lvnnAg~~~ 115 (277)
T 3gvc_A 99 AAFGGVDKLVANAGVVH 115 (277)
T ss_dssp HHHSSCCEEEECCCCCC
T ss_pred HHcCCCCEEEECCCCCC
Confidence 1136899998766543
No 457
>3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} SCOP: c.2.1.0
Probab=76.72 E-value=24 Score=29.60 Aligned_cols=74 Identities=22% Similarity=0.343 Sum_probs=50.5
Q ss_pred CCCCeEEEEcCccCH---HHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHhhhCCCCCCCeEEEEecCCCCC-----C-CC
Q 018740 176 VLGGNIIDASCGSGL---FSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLP-----F-AS 246 (351)
Q Consensus 176 ~~~~~vLDiGcG~G~---~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~g~~~~~i~~~~~d~~~lp-----~-~~ 246 (351)
.++++||=.|++.|. ++..|++.|. +|+.++.++..++...+.+ ..++.+..+|+.+.. + ..
T Consensus 12 ~~~k~vlVTGas~gIG~~~a~~l~~~G~--~V~~~~r~~~~~~~~~~~~-------~~~~~~~~~D~~~~~~~~~~~~~~ 82 (249)
T 3f9i_A 12 LTGKTSLITGASSGIGSAIARLLHKLGS--KVIISGSNEEKLKSLGNAL-------KDNYTIEVCNLANKEECSNLISKT 82 (249)
T ss_dssp CTTCEEEETTTTSHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHH-------CSSEEEEECCTTSHHHHHHHHHTC
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHCCC--EEEEEcCCHHHHHHHHHHh-------ccCccEEEcCCCCHHHHHHHHHhc
Confidence 356789988876542 4555666676 9999999988776665443 356888899987632 1 12
Q ss_pred CceeeEEecccc
Q 018740 247 SSIDAVHAGAAI 258 (351)
Q Consensus 247 ~~fD~V~~~~vl 258 (351)
+..|+++.+..+
T Consensus 83 ~~id~li~~Ag~ 94 (249)
T 3f9i_A 83 SNLDILVCNAGI 94 (249)
T ss_dssp SCCSEEEECCC-
T ss_pred CCCCEEEECCCC
Confidence 468999987654
No 458
>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=76.58 E-value=14 Score=31.71 Aligned_cols=76 Identities=21% Similarity=0.191 Sum_probs=56.3
Q ss_pred CCCeEEEEcCccCH---HHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHhhhCCCCCCCeEEEEecCCCCC-----C----
Q 018740 177 LGGNIIDASCGSGL---FSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLP-----F---- 244 (351)
Q Consensus 177 ~~~~vLDiGcG~G~---~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~g~~~~~i~~~~~d~~~lp-----~---- 244 (351)
.++++|=.|++.|. .+..|++.|. +|+.+|.++..++...+.+... ..++.++.+|+.+.. +
T Consensus 10 ~~k~vlVTGas~gIG~aia~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~----~~~~~~~~~Dv~~~~~v~~~~~~~~ 83 (264)
T 3ucx_A 10 TDKVVVISGVGPALGTTLARRCAEQGA--DLVLAARTVERLEDVAKQVTDT----GRRALSVGTDITDDAQVAHLVDETM 83 (264)
T ss_dssp TTCEEEEESCCTTHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHHHT----TCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred CCcEEEEECCCcHHHHHHHHHHHHCcC--EEEEEeCCHHHHHHHHHHHHhc----CCcEEEEEcCCCCHHHHHHHHHHHH
Confidence 46789999987763 5566777776 9999999998888777776655 568899999997642 0
Q ss_pred -CCCceeeEEecccc
Q 018740 245 -ASSSIDAVHAGAAI 258 (351)
Q Consensus 245 -~~~~fD~V~~~~vl 258 (351)
..+..|+++.+...
T Consensus 84 ~~~g~id~lv~nAg~ 98 (264)
T 3ucx_A 84 KAYGRVDVVINNAFR 98 (264)
T ss_dssp HHTSCCSEEEECCCS
T ss_pred HHcCCCcEEEECCCC
Confidence 12468999987643
No 459
>3swr_A DNA (cytosine-5)-methyltransferase 1; epigenetics, DNA methyltransferase fold, maintenance methyla transferase; HET: DNA SFG MES; 2.49A {Homo sapiens} PDB: 3pta_A* 3pt6_A* 3pt9_A* 4da4_A*
Probab=76.57 E-value=3.4 Score=43.14 Aligned_cols=71 Identities=15% Similarity=0.214 Sum_probs=51.5
Q ss_pred CCeEEEEcCccCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHhhhCCCCCCCeEEEEecCCC----------------
Q 018740 178 GGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISR---------------- 241 (351)
Q Consensus 178 ~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~g~~~~~i~~~~~d~~~---------------- 241 (351)
..+++|+-||.|.++..+.+.|....+.++|+++.+++.-+.+ .++..++..|+..
T Consensus 540 ~l~~iDLFaG~GGlslGl~~AG~~~vv~avEid~~A~~ty~~N--------~p~~~~~~~DI~~l~~~~~~~di~~~~~~ 611 (1002)
T 3swr_A 540 KLRTLDVFSGCGGLSEGFHQAGISDTLWAIEMWDPAAQAFRLN--------NPGSTVFTEDCNILLKLVMAGETTNSRGQ 611 (1002)
T ss_dssp CEEEEEESCTTSHHHHHHHHHTSEEEEEEECSSHHHHHHHHHH--------CTTSEEECSCHHHHHHHHHHTCSBCTTCC
T ss_pred CCeEEEeccCccHHHHHHHHCCCCceEEEEECCHHHHHHHHHh--------CCCCccccccHHHHhhhccchhhhhhhhh
Confidence 4589999999999999999987423578999999988877765 3455566655421
Q ss_pred -CCCCCCceeeEEeccc
Q 018740 242 -LPFASSSIDAVHAGAA 257 (351)
Q Consensus 242 -lp~~~~~fD~V~~~~v 257 (351)
+| ..+.+|+|+...-
T Consensus 612 ~lp-~~~~vDll~GGpP 627 (1002)
T 3swr_A 612 RLP-QKGDVEMLCGGPP 627 (1002)
T ss_dssp BCC-CTTTCSEEEECCC
T ss_pred hcc-cCCCeeEEEEcCC
Confidence 22 1356899997543
No 460
>1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A*
Probab=76.28 E-value=14 Score=31.92 Aligned_cols=104 Identities=15% Similarity=0.251 Sum_probs=62.6
Q ss_pred CCeEEEEcCccCH---HHHHHHHhCCCCeEEEEeCCHH-HHHHHHHHHhhhCCCCCCCeEEEEecCCCCC-----CC---
Q 018740 178 GGNIIDASCGSGL---FSRIFAKSGLFSLVVALDYSEN-MLKQCYEFVQQESNFPKENFLLVRADISRLP-----FA--- 245 (351)
Q Consensus 178 ~~~vLDiGcG~G~---~~~~l~~~~~~~~v~gvD~s~~-~~~~a~~~~~~~~g~~~~~i~~~~~d~~~lp-----~~--- 245 (351)
++++|=.|++.|. .+..|++.|. +|+.++.+.. ..+...+.+... ..++.++.+|+.+.. +.
T Consensus 29 ~k~vlVTGas~gIG~~ia~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~~----~~~~~~~~~D~~~~~~~~~~~~~~~ 102 (283)
T 1g0o_A 29 GKVALVTGAGRGIGREMAMELGRRGC--KVIVNYANSTESAEEVVAAIKKN----GSDAACVKANVGVVEDIVRMFEEAV 102 (283)
T ss_dssp TCEEEETTTTSHHHHHHHHHHHHTTC--EEEEEESSCHHHHHHHHHHHHHT----TCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCC--EEEEEeCCchHHHHHHHHHHHHh----CCCeEEEEcCCCCHHHHHHHHHHHH
Confidence 5678888875542 4455556666 8999988754 334443444333 457888999987532 00
Q ss_pred --CCceeeEEeccccccCC-----Ch--------------HHHHHHHHhcccCCcEEEEEeec
Q 018740 246 --SSSIDAVHAGAAIHCWS-----SP--------------STGVAEISRVLRPGGVFVGTTYI 287 (351)
Q Consensus 246 --~~~fD~V~~~~vl~h~~-----d~--------------~~~l~~i~~~LkpgG~li~~~~~ 287 (351)
-+..|+++.+..+.... ++ ..+++.+.+.|+.+|.++.....
T Consensus 103 ~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~ 165 (283)
T 1g0o_A 103 KIFGKLDIVCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQFFVAREAYKHLEIGGRLILMGSI 165 (283)
T ss_dssp HHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSCTTCEEEEECCG
T ss_pred HHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhcCCeEEEEech
Confidence 13689999876543321 11 12345666666677888776543
No 461
>1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A*
Probab=76.20 E-value=11 Score=31.97 Aligned_cols=75 Identities=17% Similarity=0.222 Sum_probs=48.1
Q ss_pred CCeEEEEcCccCH---HHHHHHHhCCCCeEEEEeC-CHHHHHHHHHHHhhhCCCCCCCeEEEEecCCCCC-----CC---
Q 018740 178 GGNIIDASCGSGL---FSRIFAKSGLFSLVVALDY-SENMLKQCYEFVQQESNFPKENFLLVRADISRLP-----FA--- 245 (351)
Q Consensus 178 ~~~vLDiGcG~G~---~~~~l~~~~~~~~v~gvD~-s~~~~~~a~~~~~~~~g~~~~~i~~~~~d~~~lp-----~~--- 245 (351)
+++||=.|++.|. ++..|++.+. +|+.++. ++..++...+.+... ..++.++.+|+.+.. +.
T Consensus 7 ~k~vlITGasggiG~~~a~~l~~~G~--~V~~~~r~~~~~~~~~~~~l~~~----~~~~~~~~~D~~~~~~~~~~~~~~~ 80 (261)
T 1gee_A 7 GKVVVITGSSTGLGKSMAIRFATEKA--KVVVNYRSKEDEANSVLEEIKKV----GGEAIAVKGDVTVESDVINLVQSAI 80 (261)
T ss_dssp TCEEEETTCSSHHHHHHHHHHHHTTC--EEEEEESSCHHHHHHHHHHHHHT----TCEEEEEECCTTSHHHHHHHHHHHH
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCC--EEEEEcCCChHHHHHHHHHHHhc----CCceEEEECCCCCHHHHHHHHHHHH
Confidence 4578877765432 3445555665 8999998 776666555555443 457888999987642 00
Q ss_pred --CCceeeEEecccc
Q 018740 246 --SSSIDAVHAGAAI 258 (351)
Q Consensus 246 --~~~fD~V~~~~vl 258 (351)
-+.+|+|+.+..+
T Consensus 81 ~~~g~id~li~~Ag~ 95 (261)
T 1gee_A 81 KEFGKLDVMINNAGL 95 (261)
T ss_dssp HHHSCCCEEEECCCC
T ss_pred HHcCCCCEEEECCCC
Confidence 1368999987654
No 462
>3qt1_I DNA-directed RNA polymerases I, II, and III subun; transferase-transcription complex, RNA polymerase II, transc elongation; 4.30A {Saccharomyces cerevisiae}
Probab=76.19 E-value=2.2 Score=33.12 Aligned_cols=39 Identities=18% Similarity=0.234 Sum_probs=26.0
Q ss_pred CCceeCCCCCCCcccccCCCcccccccCCccccccccccccccC
Q 018740 69 KNVLACPICYKPLTWIGDSSLSIESAAGSSLQCNTCKKTYSGVG 112 (351)
Q Consensus 69 ~~~l~CP~C~~~l~~~~~~~~~~~~~~~~~~~C~~C~~~~~~~~ 112 (351)
..+--||.|+.-|...... ......+.|++|+....+..
T Consensus 22 ~~~~FCPeCgNmL~pked~-----~~~~l~~~CrtCgY~~~~~~ 60 (133)
T 3qt1_I 22 TTFRFCRDCNNMLYPREDK-----ENNRLLFECRTCSYVEEAGS 60 (133)
T ss_dssp CCCCBCTTTCCBCBCCBCT-----TTCCBCCBCSSSCCBCCCSC
T ss_pred cCCeeCCCCCCEeeECccC-----CCceeEEECCCCCCcEEcCC
Confidence 3456799999988665411 01134689999998776544
No 463
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=76.17 E-value=16 Score=30.44 Aligned_cols=75 Identities=21% Similarity=0.154 Sum_probs=47.8
Q ss_pred CCCeEEEEcCccCHH----HHHHHHhCCCCeEEEEeCCHHHHHHHHHHHhhhCCCCCCCe-EEEEecCC-CCCCCCCcee
Q 018740 177 LGGNIIDASCGSGLF----SRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENF-LLVRADIS-RLPFASSSID 250 (351)
Q Consensus 177 ~~~~vLDiGcG~G~~----~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~g~~~~~i-~~~~~d~~-~lp~~~~~fD 250 (351)
.+.+||=.|+ +|.. +..|++.+. +|++++-++..++.... .++ .++.+|+. .+.-.-+..|
T Consensus 20 ~~~~ilVtGa-tG~iG~~l~~~L~~~G~--~V~~~~R~~~~~~~~~~----------~~~~~~~~~Dl~~~~~~~~~~~D 86 (236)
T 3e8x_A 20 QGMRVLVVGA-NGKVARYLLSELKNKGH--EPVAMVRNEEQGPELRE----------RGASDIVVANLEEDFSHAFASID 86 (236)
T ss_dssp -CCEEEEETT-TSHHHHHHHHHHHHTTC--EEEEEESSGGGHHHHHH----------TTCSEEEECCTTSCCGGGGTTCS
T ss_pred CCCeEEEECC-CChHHHHHHHHHHhCCC--eEEEEECChHHHHHHHh----------CCCceEEEcccHHHHHHHHcCCC
Confidence 3568998886 3443 444555565 99999998876554432 367 88999986 2221224689
Q ss_pred eEEeccccccCCCh
Q 018740 251 AVHAGAAIHCWSSP 264 (351)
Q Consensus 251 ~V~~~~vl~h~~d~ 264 (351)
+|+.+.......++
T Consensus 87 ~vi~~ag~~~~~~~ 100 (236)
T 3e8x_A 87 AVVFAAGSGPHTGA 100 (236)
T ss_dssp EEEECCCCCTTSCH
T ss_pred EEEECCCCCCCCCc
Confidence 99987765443333
No 464
>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A
Probab=76.12 E-value=13 Score=31.73 Aligned_cols=73 Identities=18% Similarity=0.292 Sum_probs=50.5
Q ss_pred CCCeEEEEcCccCH---HHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHhhhCCCCCCCeEEEEecCCCCC-----C----
Q 018740 177 LGGNIIDASCGSGL---FSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLP-----F---- 244 (351)
Q Consensus 177 ~~~~vLDiGcG~G~---~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~g~~~~~i~~~~~d~~~lp-----~---- 244 (351)
.++++|=.|++.|. +...|++.|. +|+.+|.++..++...+.+ ..++.++.+|+.+.. +
T Consensus 7 ~~k~vlVTGas~gIG~~ia~~l~~~G~--~V~~~~r~~~~~~~~~~~~-------~~~~~~~~~D~~~~~~v~~~~~~~~ 77 (259)
T 4e6p_A 7 EGKSALITGSARGIGRAFAEAYVREGA--TVAIADIDIERARQAAAEI-------GPAAYAVQMDVTRQDSIDAAIAATV 77 (259)
T ss_dssp TTCEEEEETCSSHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHH-------CTTEEEEECCTTCHHHHHHHHHHHH
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHh-------CCCceEEEeeCCCHHHHHHHHHHHH
Confidence 35688988876552 4556667776 9999999987766555443 356788999987642 0
Q ss_pred -CCCceeeEEecccc
Q 018740 245 -ASSSIDAVHAGAAI 258 (351)
Q Consensus 245 -~~~~fD~V~~~~vl 258 (351)
..+..|+++.+..+
T Consensus 78 ~~~g~id~lv~~Ag~ 92 (259)
T 4e6p_A 78 EHAGGLDILVNNAAL 92 (259)
T ss_dssp HHSSSCCEEEECCCC
T ss_pred HHcCCCCEEEECCCc
Confidence 12368999987654
No 465
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=76.06 E-value=6.8 Score=30.65 Aligned_cols=94 Identities=19% Similarity=0.187 Sum_probs=52.8
Q ss_pred CCCeEEEEcCcc-CH-HHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHhhhCCCCCCCeEEEEecCCCCC----CCCCcee
Q 018740 177 LGGNIIDASCGS-GL-FSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLP----FASSSID 250 (351)
Q Consensus 177 ~~~~vLDiGcG~-G~-~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~g~~~~~i~~~~~d~~~lp----~~~~~fD 250 (351)
++.+|+=+|+|. |. ++..|.+.+. +|+++|.++..++.+++ ..+...+.+|..+.. ..-..+|
T Consensus 18 ~~~~v~IiG~G~iG~~la~~L~~~g~--~V~vid~~~~~~~~~~~---------~~g~~~~~~d~~~~~~l~~~~~~~ad 86 (155)
T 2g1u_A 18 KSKYIVIFGCGRLGSLIANLASSSGH--SVVVVDKNEYAFHRLNS---------EFSGFTVVGDAAEFETLKECGMEKAD 86 (155)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTC--EEEEEESCGGGGGGSCT---------TCCSEEEESCTTSHHHHHTTTGGGCS
T ss_pred CCCcEEEECCCHHHHHHHHHHHhCCC--eEEEEECCHHHHHHHHh---------cCCCcEEEecCCCHHHHHHcCcccCC
Confidence 467899999875 54 3344445555 89999999865543321 123456666654321 1123588
Q ss_pred eEEeccccccCCChH--HHHHHHHhcccCCcEEEEEee
Q 018740 251 AVHAGAAIHCWSSPS--TGVAEISRVLRPGGVFVGTTY 286 (351)
Q Consensus 251 ~V~~~~vl~h~~d~~--~~l~~i~~~LkpgG~li~~~~ 286 (351)
+|+..- +++. ..+..+.+.+.+...++....
T Consensus 87 ~Vi~~~-----~~~~~~~~~~~~~~~~~~~~~iv~~~~ 119 (155)
T 2g1u_A 87 MVFAFT-----NDDSTNFFISMNARYMFNVENVIARVY 119 (155)
T ss_dssp EEEECS-----SCHHHHHHHHHHHHHTSCCSEEEEECS
T ss_pred EEEEEe-----CCcHHHHHHHHHHHHHCCCCeEEEEEC
Confidence 888543 2332 334445555556566665443
No 466
>4ayb_P DNA-directed RNA polymerase; transferase, multi-subunit, transcription; 3.20A {Sulfolobus shibatae} PDB: 2pmz_P 2wb1_P 2y0s_P 3hkz_P 2waq_P 4b1o_P 4b1p_X
Probab=76.06 E-value=1.8 Score=26.70 Aligned_cols=31 Identities=23% Similarity=0.402 Sum_probs=19.9
Q ss_pred CceeCCCCCCCcccccCCCcccccccCCcccccccccc
Q 018740 70 NVLACPICYKPLTWIGDSSLSIESAAGSSLQCNTCKKT 107 (351)
Q Consensus 70 ~~l~CP~C~~~l~~~~~~~~~~~~~~~~~~~C~~C~~~ 107 (351)
..+.|-.||..+....- ..-...+|+-||..
T Consensus 2 ~iY~C~rCg~~fs~~el-------~~lP~IrCpyCGyr 32 (48)
T 4ayb_P 2 AVYRCGKCWKTFTDEQL-------KVLPGVRCPYCGYK 32 (48)
T ss_dssp ---CCCCTTTTCCCCCS-------CCCSSSCCTTTCCS
T ss_pred cEEEeeccCCCccHHHH-------hhCCCcccCccCcE
Confidence 35789999987766542 23367899999853
No 467
>3j21_i 50S ribosomal protein L37AE; archaea, archaeal, KINK-turn, protein synthe ribosome; 6.60A {Pyrococcus furiosus}
Probab=75.95 E-value=0.97 Score=31.90 Aligned_cols=31 Identities=23% Similarity=0.573 Sum_probs=22.3
Q ss_pred CceeCCCCCCCcccccCCCcccccccCCcccccccccccc
Q 018740 70 NVLACPICYKPLTWIGDSSLSIESAAGSSLQCNTCKKTYS 109 (351)
Q Consensus 70 ~~l~CP~C~~~l~~~~~~~~~~~~~~~~~~~C~~C~~~~~ 109 (351)
..+.||.|+..-... ...++..|..|+..+-
T Consensus 34 ~ky~CpfCGk~~vkR---------~a~GIW~C~kCg~~~A 64 (83)
T 3j21_i 34 QKHTCPVCGRKAVKR---------ISTGIWQCQKCGATFA 64 (83)
T ss_dssp SCBCCSSSCSSCEEE---------EETTEEEETTTCCEEE
T ss_pred cccCCCCCCCceeEe---------cCcCeEEcCCCCCEEe
Confidence 448899999863222 3358899999987764
No 468
>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*
Probab=75.93 E-value=1.8 Score=40.11 Aligned_cols=42 Identities=21% Similarity=0.112 Sum_probs=30.7
Q ss_pred CCCeEEEEcCcc-CHHHHHHHHhCCCCeEEEEeCCHHHHHHHHH
Q 018740 177 LGGNIIDASCGS-GLFSRIFAKSGLFSLVVALDYSENMLKQCYE 219 (351)
Q Consensus 177 ~~~~vLDiGcG~-G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~ 219 (351)
++.+|+=+|+|. |.....+++.. +.+|+.+|.++...+.+++
T Consensus 171 ~g~~V~ViGaG~iG~~aa~~a~~~-Ga~V~~~d~~~~~~~~~~~ 213 (384)
T 1l7d_A 171 PPARVLVFGVGVAGLQAIATAKRL-GAVVMATDVRAATKEQVES 213 (384)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHT-TCEEEEECSCSTTHHHHHH
T ss_pred CCCEEEEECCCHHHHHHHHHHHHC-CCEEEEEeCCHHHHHHHHH
Confidence 578999999985 66555555543 2489999999877666654
No 469
>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A*
Probab=75.88 E-value=24 Score=29.32 Aligned_cols=77 Identities=16% Similarity=0.176 Sum_probs=53.1
Q ss_pred CCeEEEEcCccCH---HHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHh-hhCCCCCCCeEEEEecCCCCC-----CC---
Q 018740 178 GGNIIDASCGSGL---FSRIFAKSGLFSLVVALDYSENMLKQCYEFVQ-QESNFPKENFLLVRADISRLP-----FA--- 245 (351)
Q Consensus 178 ~~~vLDiGcG~G~---~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~-~~~g~~~~~i~~~~~d~~~lp-----~~--- 245 (351)
++++|=.|++.|. ++..|++.|. +|+.++.++..++...+.+. .. ..++.++.+|+.+.. +.
T Consensus 2 ~k~vlITGas~gIG~~ia~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~~----~~~~~~~~~D~~~~~~v~~~~~~~~ 75 (235)
T 3l77_A 2 MKVAVITGASRGIGEAIARALARDGY--ALALGARSVDRLEKIAHELMQEQ----GVEVFYHHLDVSKAESVEEFSKKVL 75 (235)
T ss_dssp CCEEEEESCSSHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHHHHH----CCCEEEEECCTTCHHHHHHHCC-HH
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHHhhc----CCeEEEEEeccCCHHHHHHHHHHHH
Confidence 4578888876542 4556666676 89999999887777666554 33 468899999997642 11
Q ss_pred --CCceeeEEecccccc
Q 018740 246 --SSSIDAVHAGAAIHC 260 (351)
Q Consensus 246 --~~~fD~V~~~~vl~h 260 (351)
.+..|+++.+..+.+
T Consensus 76 ~~~g~id~li~~Ag~~~ 92 (235)
T 3l77_A 76 ERFGDVDVVVANAGLGY 92 (235)
T ss_dssp HHHSSCSEEEECCCCCC
T ss_pred HhcCCCCEEEECCcccc
Confidence 136899998766543
No 470
>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp}
Probab=75.76 E-value=11 Score=31.99 Aligned_cols=76 Identities=21% Similarity=0.239 Sum_probs=55.2
Q ss_pred CCCeEEEEcCccCH---HHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHhhhCCCCCCCeEEEEecCCCCCC---------
Q 018740 177 LGGNIIDASCGSGL---FSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLPF--------- 244 (351)
Q Consensus 177 ~~~~vLDiGcG~G~---~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~g~~~~~i~~~~~d~~~lp~--------- 244 (351)
.++++|=.|++.|. ++..|++.|. +|+.+|.++..++...+.+... ..++.++.+|+.+..-
T Consensus 8 ~~k~vlITGas~giG~~~a~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~----~~~~~~~~~D~~~~~~~~~~~~~~~ 81 (253)
T 3qiv_A 8 ENKVGIVTGSGGGIGQAYAEALAREGA--AVVVADINAEAAEAVAKQIVAD----GGTAISVAVDVSDPESAKAMADRTL 81 (253)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHHHT----TCEEEEEECCTTSHHHHHHHHHHHH
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCC--EEEEEcCCHHHHHHHHHHHHhc----CCcEEEEEccCCCHHHHHHHHHHHH
Confidence 35688989976552 5566666776 9999999998888877776655 5678899999976420
Q ss_pred -CCCceeeEEecccc
Q 018740 245 -ASSSIDAVHAGAAI 258 (351)
Q Consensus 245 -~~~~fD~V~~~~vl 258 (351)
..+..|+++.+..+
T Consensus 82 ~~~g~id~li~~Ag~ 96 (253)
T 3qiv_A 82 AEFGGIDYLVNNAAI 96 (253)
T ss_dssp HHHSCCCEEEECCCC
T ss_pred HHcCCCCEEEECCCc
Confidence 01368999987654
No 471
>2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2
Probab=75.76 E-value=15 Score=31.46 Aligned_cols=105 Identities=16% Similarity=0.294 Sum_probs=62.6
Q ss_pred CCeEEEEcCccCH---HHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHhhhCCCCCCCeEEEEecCCCCC-----C-----
Q 018740 178 GGNIIDASCGSGL---FSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLP-----F----- 244 (351)
Q Consensus 178 ~~~vLDiGcG~G~---~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~g~~~~~i~~~~~d~~~lp-----~----- 244 (351)
++++|=.|++.|. +...|++.|. +|+.++.++...+...+.+... ....++.++.+|+.+.. +
T Consensus 7 ~k~vlVTGas~gIG~~ia~~l~~~G~--~V~~~~r~~~~~~~~~~~l~~~--~~~~~~~~~~~D~~~~~~v~~~~~~~~~ 82 (267)
T 2gdz_A 7 GKVALVTGAAQGIGRAFAEALLLKGA--KVALVDWNLEAGVQCKAALHEQ--FEPQKTLFIQCDVADQQQLRDTFRKVVD 82 (267)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHTTT--SCGGGEEEEECCTTSHHHHHHHHHHHHH
T ss_pred CCEEEEECCCCcHHHHHHHHHHHCCC--EEEEEECCHHHHHHHHHHHHhh--cCCCceEEEecCCCCHHHHHHHHHHHHH
Confidence 5688888875542 4455666676 9999999987666555444321 00246888999987642 0
Q ss_pred CCCceeeEEeccccccCCChHH-----------HHHHHHhcccC-----CcEEEEEee
Q 018740 245 ASSSIDAVHAGAAIHCWSSPST-----------GVAEISRVLRP-----GGVFVGTTY 286 (351)
Q Consensus 245 ~~~~fD~V~~~~vl~h~~d~~~-----------~l~~i~~~Lkp-----gG~li~~~~ 286 (351)
.-+..|+++.+.......+... ..+.+.+.++. +|.++....
T Consensus 83 ~~g~id~lv~~Ag~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~g~iv~isS 140 (267)
T 2gdz_A 83 HFGRLDILVNNAGVNNEKNWEKTLQINLVSVISGTYLGLDYMSKQNGGEGGIIINMSS 140 (267)
T ss_dssp HHSCCCEEEECCCCCCSSSHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECC
T ss_pred HcCCCCEEEECCCCCChhhHHHHHhHHHHHHHHHHHHHHHHHHhccCCCCCEEEEeCC
Confidence 0135899998776543333332 23444444532 577766544
No 472
>2f1k_A Prephenate dehydrogenase; tyrosine synthesis, X-RA crystallography structure, oxidoreductase; HET: OMT NAP; 1.55A {Synechocystis SP} SCOP: a.100.1.12 c.2.1.6
Probab=75.60 E-value=12 Score=32.29 Aligned_cols=85 Identities=13% Similarity=0.159 Sum_probs=51.0
Q ss_pred eEEEEcCcc-CH-HHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHhhhCCCCCCCeEEEEecCCCCCCCCCceeeEEeccc
Q 018740 180 NIIDASCGS-GL-FSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLPFASSSIDAVHAGAA 257 (351)
Q Consensus 180 ~vLDiGcG~-G~-~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~g~~~~~i~~~~~d~~~lp~~~~~fD~V~~~~v 257 (351)
+|.=||+|. |. ++..+.+.+. +|+++|.+++.++.+.+. |. . .. ...|..+. ...|+|+..--
T Consensus 2 ~i~iiG~G~~G~~~a~~l~~~g~--~V~~~~~~~~~~~~~~~~-----g~--~-~~-~~~~~~~~----~~~D~vi~av~ 66 (279)
T 2f1k_A 2 KIGVVGLGLIGASLAGDLRRRGH--YLIGVSRQQSTCEKAVER-----QL--V-DE-AGQDLSLL----QTAKIIFLCTP 66 (279)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTC--EEEEECSCHHHHHHHHHT-----TS--C-SE-EESCGGGG----TTCSEEEECSC
T ss_pred EEEEEcCcHHHHHHHHHHHHCCC--EEEEEECCHHHHHHHHhC-----CC--C-cc-ccCCHHHh----CCCCEEEEECC
Confidence 577789875 43 4555666665 899999998877665431 11 1 11 12333332 35798886432
Q ss_pred cccCCChHHHHHHHHhcccCCcEEE
Q 018740 258 IHCWSSPSTGVAEISRVLRPGGVFV 282 (351)
Q Consensus 258 l~h~~d~~~~l~~i~~~LkpgG~li 282 (351)
-. ....+++++...++|+.+++
T Consensus 67 ~~---~~~~~~~~l~~~~~~~~~vv 88 (279)
T 2f1k_A 67 IQ---LILPTLEKLIPHLSPTAIVT 88 (279)
T ss_dssp HH---HHHHHHHHHGGGSCTTCEEE
T ss_pred HH---HHHHHHHHHHhhCCCCCEEE
Confidence 21 12466777888888877554
No 473
>3iht_A S-adenosyl-L-methionine methyl transferase; YP_165822.1, STR genomics, joint center for structural genomics, JCSG; HET: MSE SAM; 1.80A {Ruegeria pomeroyi dss-3}
Probab=75.56 E-value=7.8 Score=30.90 Aligned_cols=32 Identities=9% Similarity=0.103 Sum_probs=29.7
Q ss_pred CCeEEEEcCccCHHHHHHHHhCCCCeEEEEeC
Q 018740 178 GGNIIDASCGSGLFSRIFAKSGLFSLVVALDY 209 (351)
Q Consensus 178 ~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~ 209 (351)
.+-|||+|=|+|+.-..+.+..|+.+++.+|-
T Consensus 41 ~GpVlElGLGNGRTydHLRe~~P~R~I~vfDR 72 (174)
T 3iht_A 41 SGPVYELGLGNGRTYHHLRQHVQGREIYVFER 72 (174)
T ss_dssp CSCEEEECCTTCHHHHHHHHHCCSSCEEEEES
T ss_pred CCceEEecCCCChhHHHHHHhCCCCcEEEEEe
Confidence 55899999999999999999999999999996
No 474
>1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2
Probab=75.51 E-value=8.7 Score=33.22 Aligned_cols=76 Identities=16% Similarity=0.210 Sum_probs=52.4
Q ss_pred CCCeEEEEcCccCH---HHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHhhhCCCCCCCeEEEEecCCCCC-----CC---
Q 018740 177 LGGNIIDASCGSGL---FSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLP-----FA--- 245 (351)
Q Consensus 177 ~~~~vLDiGcG~G~---~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~g~~~~~i~~~~~d~~~lp-----~~--- 245 (351)
.++++|=.|++.|. .+..|++.|. +|+.++.++..++...+.+... ..++.++.+|+.+.. +.
T Consensus 20 ~~k~vlVTGas~gIG~aia~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~----~~~~~~~~~D~~~~~~~~~~~~~~~ 93 (273)
T 1ae1_A 20 KGTTALVTGGSKGIGYAIVEELAGLGA--RVYTCSRNEKELDECLEIWREK----GLNVEGSVCDLLSRTERDKLMQTVA 93 (273)
T ss_dssp TTCEEEEESCSSHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHHHT----TCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred CCCEEEEECCcchHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHHhc----CCceEEEECCCCCHHHHHHHHHHHH
Confidence 35688988875542 4455566676 9999999987776665555443 457888999987642 00
Q ss_pred ---CCceeeEEecccc
Q 018740 246 ---SSSIDAVHAGAAI 258 (351)
Q Consensus 246 ---~~~fD~V~~~~vl 258 (351)
++..|+++.+..+
T Consensus 94 ~~~~g~id~lv~nAg~ 109 (273)
T 1ae1_A 94 HVFDGKLNILVNNAGV 109 (273)
T ss_dssp HHTTSCCCEEEECCCC
T ss_pred HHcCCCCcEEEECCCC
Confidence 1678999987654
No 475
>3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1}
Probab=75.48 E-value=10 Score=32.51 Aligned_cols=104 Identities=13% Similarity=0.109 Sum_probs=62.7
Q ss_pred CCCeEEEEcCccCH---HHHHHHHhCCCCeEEEEeCCH---HHHHHHHHHHhhhCCCCCCCeEEEEecCCCCC-----C-
Q 018740 177 LGGNIIDASCGSGL---FSRIFAKSGLFSLVVALDYSE---NMLKQCYEFVQQESNFPKENFLLVRADISRLP-----F- 244 (351)
Q Consensus 177 ~~~~vLDiGcG~G~---~~~~l~~~~~~~~v~gvD~s~---~~~~~a~~~~~~~~g~~~~~i~~~~~d~~~lp-----~- 244 (351)
.++++|=.|++.|. .+..|++.|. +|+.++.+. ..++...+.+... ..++.++.+|+.+.. +
T Consensus 10 ~~k~vlVTGas~GIG~aia~~la~~G~--~V~~~~r~~~~~~~~~~~~~~~~~~----~~~~~~~~~Dv~d~~~v~~~~~ 83 (262)
T 3ksu_A 10 KNKVIVIAGGIKNLGALTAKTFALESV--NLVLHYHQAKDSDTANKLKDELEDQ----GAKVALYQSDLSNEEEVAKLFD 83 (262)
T ss_dssp TTCEEEEETCSSHHHHHHHHHHTTSSC--EEEEEESCGGGHHHHHHHHHHHHTT----TCEEEEEECCCCSHHHHHHHHH
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC--EEEEEecCccCHHHHHHHHHHHHhc----CCcEEEEECCCCCHHHHHHHHH
Confidence 46688988876653 3344455565 899887643 3444444444443 467889999997642 0
Q ss_pred ----CCCceeeEEeccccccCC-----Ch--------------HHHHHHHHhcccCCcEEEEEee
Q 018740 245 ----ASSSIDAVHAGAAIHCWS-----SP--------------STGVAEISRVLRPGGVFVGTTY 286 (351)
Q Consensus 245 ----~~~~fD~V~~~~vl~h~~-----d~--------------~~~l~~i~~~LkpgG~li~~~~ 286 (351)
.-+..|+++.+..+.... ++ ..+++.+.+.|+++|.++....
T Consensus 84 ~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~iv~isS 148 (262)
T 3ksu_A 84 FAEKEFGKVDIAINTVGKVLKKPIVETSEAEFDAMDTINNKVAYFFIKQAAKHMNPNGHIITIAT 148 (262)
T ss_dssp HHHHHHCSEEEEEECCCCCCSSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHTTEEEEEEEEEECC
T ss_pred HHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCEEEEEec
Confidence 114689999876543221 11 1334556666677788776543
No 476
>4a27_A Synaptic vesicle membrane protein VAT-1 homolog-L; oxidoreductase; 2.10A {Homo sapiens}
Probab=75.07 E-value=6 Score=35.72 Aligned_cols=98 Identities=12% Similarity=0.022 Sum_probs=55.6
Q ss_pred HhccCCCCCCeEEEEcC-c-cCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHhhhCCCCCCCeEEEEecCCCC-----
Q 018740 170 KGYLKPVLGGNIIDASC-G-SGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRL----- 242 (351)
Q Consensus 170 ~~~l~~~~~~~vLDiGc-G-~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~g~~~~~i~~~~~d~~~l----- 242 (351)
.+..+..++.+||=.|+ | .|.++..+++.....+|++++ ++.-.+.++ +. .. ..+. +-.++
T Consensus 135 ~~~~~~~~g~~VlV~Ga~G~vG~~a~qla~~~g~~~V~~~~-~~~~~~~~~--~g------a~--~~~~-~~~~~~~~~~ 202 (349)
T 4a27_A 135 FEVANLREGMSVLVHSAGGGVGQAVAQLCSTVPNVTVFGTA-STFKHEAIK--DS------VT--HLFD-RNADYVQEVK 202 (349)
T ss_dssp HTTSCCCTTCEEEESSTTSHHHHHHHHHHTTSTTCEEEEEE-CGGGHHHHG--GG------SS--EEEE-TTSCHHHHHH
T ss_pred HHhcCCCCCCEEEEEcCCcHHHHHHHHHHHHcCCcEEEEeC-CHHHHHHHH--cC------Cc--EEEc-CCccHHHHHH
Confidence 34456677899999998 3 477777777764345899998 554444444 11 11 1222 11111
Q ss_pred CCCCCceeeEEeccccccCCChHHHHHHHHhcccCCcEEEEEee
Q 018740 243 PFASSSIDAVHAGAAIHCWSSPSTGVAEISRVLRPGGVFVGTTY 286 (351)
Q Consensus 243 p~~~~~fD~V~~~~vl~h~~d~~~~l~~i~~~LkpgG~li~~~~ 286 (351)
....+.+|+|+-.-. .+ .+....+.|+++|++++...
T Consensus 203 ~~~~~g~Dvv~d~~g-----~~--~~~~~~~~l~~~G~~v~~G~ 239 (349)
T 4a27_A 203 RISAEGVDIVLDCLC-----GD--NTGKGLSLLKPLGTYILYGS 239 (349)
T ss_dssp HHCTTCEEEEEEECC--------------CTTEEEEEEEEEEC-
T ss_pred HhcCCCceEEEECCC-----ch--hHHHHHHHhhcCCEEEEECC
Confidence 012357999995332 22 24678899999999987643
No 477
>2dpo_A L-gulonate 3-dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Oryctolagus cuniculus} PDB: 2ep9_A* 3ado_A 3a97_A 3adp_A* 3f3s_A*
Probab=74.87 E-value=9.6 Score=34.16 Aligned_cols=94 Identities=16% Similarity=0.274 Sum_probs=58.0
Q ss_pred CeEEEEcCcc-C-HHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHhhh------CCCCC---------CCeEEEEecCCC
Q 018740 179 GNIIDASCGS-G-LFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQE------SNFPK---------ENFLLVRADISR 241 (351)
Q Consensus 179 ~~vLDiGcG~-G-~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~------~g~~~---------~~i~~~~~d~~~ 241 (351)
.+|-=||+|. | .++..+++.|. +|+++|.+++.++.+++.+... .|... .++.+. .|+.+
T Consensus 7 ~kI~vIGaG~MG~~iA~~la~~G~--~V~l~d~~~~~~~~~~~~i~~~l~~l~~~G~~~g~~~~~~~~~~i~~~-~~~~e 83 (319)
T 2dpo_A 7 GDVLIVGSGLVGRSWAMLFASGGF--RVKLYDIEPRQITGALENIRKEMKSLQQSGSLKGSLSAEEQLSLISSC-TNLAE 83 (319)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTC--CEEEECSCHHHHHHHHHHHHHHHHHHHHTTCCCSSSCHHHHHHTEEEE-CCHHH
T ss_pred ceEEEEeeCHHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHHHHHHHHHHcCccccccchHHHhhceEEe-CCHHH
Confidence 4788899986 4 46677777776 8999999999988886643211 01100 023322 23221
Q ss_pred CCCCCCceeeEEeccccccCCC-h---HHHHHHHHhcccCCcEEEE
Q 018740 242 LPFASSSIDAVHAGAAIHCWSS-P---STGVAEISRVLRPGGVFVG 283 (351)
Q Consensus 242 lp~~~~~fD~V~~~~vl~h~~d-~---~~~l~~i~~~LkpgG~li~ 283 (351)
. -...|+|+. .+++ + ..+++++...++|+.+++-
T Consensus 84 a---v~~aDlVie-----avpe~~~~k~~v~~~l~~~~~~~~Ii~s 121 (319)
T 2dpo_A 84 A---VEGVVHIQE-----CVPENLDLKRKIFAQLDSIVDDRVVLSS 121 (319)
T ss_dssp H---TTTEEEEEE-----CCCSCHHHHHHHHHHHHTTCCSSSEEEE
T ss_pred H---HhcCCEEEE-----eccCCHHHHHHHHHHHHhhCCCCeEEEE
Confidence 1 134788874 3443 2 3678888889988886653
No 478
>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}
Probab=74.51 E-value=13 Score=32.74 Aligned_cols=78 Identities=22% Similarity=0.213 Sum_probs=57.0
Q ss_pred CCCCeEEEEcCccCH---HHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHhhhCCCCCCCeEEEEecCCCCCC--------
Q 018740 176 VLGGNIIDASCGSGL---FSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLPF-------- 244 (351)
Q Consensus 176 ~~~~~vLDiGcG~G~---~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~g~~~~~i~~~~~d~~~lp~-------- 244 (351)
..+++||=.|++.|. ++..|++.|. +|+.++.++..++.+.+.+... ..++.++.+|+.+..-
T Consensus 29 l~gk~vlVTGas~gIG~~la~~l~~~G~--~V~~~~r~~~~~~~~~~~l~~~----~~~~~~~~~Dv~d~~~v~~~~~~~ 102 (301)
T 3tjr_A 29 FDGRAAVVTGGASGIGLATATEFARRGA--RLVLSDVDQPALEQAVNGLRGQ----GFDAHGVVCDVRHLDEMVRLADEA 102 (301)
T ss_dssp STTCEEEEETTTSHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHHHT----TCCEEEEECCTTCHHHHHHHHHHH
T ss_pred cCCCEEEEeCCCCHHHHHHHHHHHHCCC--EEEEEECCHHHHHHHHHHHHhc----CCceEEEEccCCCHHHHHHHHHHH
Confidence 346789999987653 5566666776 9999999998888877776655 5688999999976420
Q ss_pred --CCCceeeEEeccccc
Q 018740 245 --ASSSIDAVHAGAAIH 259 (351)
Q Consensus 245 --~~~~fD~V~~~~vl~ 259 (351)
..+..|+++.+..+.
T Consensus 103 ~~~~g~id~lvnnAg~~ 119 (301)
T 3tjr_A 103 FRLLGGVDVVFSNAGIV 119 (301)
T ss_dssp HHHHSSCSEEEECCCCC
T ss_pred HHhCCCCCEEEECCCcC
Confidence 013689999876543
No 479
>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}
Probab=74.43 E-value=8.4 Score=32.92 Aligned_cols=77 Identities=12% Similarity=0.105 Sum_probs=55.9
Q ss_pred CCCeEEEEcCccCH---HHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHhhhCCCCCCCeEEEEecCCCCCC---------
Q 018740 177 LGGNIIDASCGSGL---FSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLPF--------- 244 (351)
Q Consensus 177 ~~~~vLDiGcG~G~---~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~g~~~~~i~~~~~d~~~lp~--------- 244 (351)
.++++|=.|++.|. ++..|++.|. +|+.+|.++..++...+.+... ..++.++.+|+.+..-
T Consensus 6 ~~k~vlVTGas~GIG~aia~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~----~~~~~~~~~Dv~~~~~v~~~~~~~~ 79 (252)
T 3h7a_A 6 RNATVAVIGAGDYIGAEIAKKFAAEGF--TVFAGRRNGEKLAPLVAEIEAA----GGRIVARSLDARNEDEVTAFLNAAD 79 (252)
T ss_dssp CSCEEEEECCSSHHHHHHHHHHHHTTC--EEEEEESSGGGGHHHHHHHHHT----TCEEEEEECCTTCHHHHHHHHHHHH
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHHhc----CCeEEEEECcCCCHHHHHHHHHHHH
Confidence 35688888887653 5566667776 9999999988887777776665 5688999999976420
Q ss_pred CCCceeeEEeccccc
Q 018740 245 ASSSIDAVHAGAAIH 259 (351)
Q Consensus 245 ~~~~fD~V~~~~vl~ 259 (351)
..+..|+++.+..+.
T Consensus 80 ~~g~id~lv~nAg~~ 94 (252)
T 3h7a_A 80 AHAPLEVTIFNVGAN 94 (252)
T ss_dssp HHSCEEEEEECCCCC
T ss_pred hhCCceEEEECCCcC
Confidence 015789999876653
No 480
>2km1_A Protein DRE2; yeast, antiapoptotic, protein binding; NMR {Saccharomyces cerevisiae}
Probab=74.33 E-value=2.6 Score=32.79 Aligned_cols=41 Identities=17% Similarity=0.323 Sum_probs=31.5
Q ss_pred CCCCCceeeEEeccccc--cCCChHHHHHHHHhcccCCcEEEE
Q 018740 243 PFASSSIDAVHAGAAIH--CWSSPSTGVAEISRVLRPGGVFVG 283 (351)
Q Consensus 243 p~~~~~fD~V~~~~vl~--h~~d~~~~l~~i~~~LkpgG~li~ 283 (351)
.++.++||.|+...--. +..-|..++..+.+.|||||.|..
T Consensus 54 sLp~stYD~V~~lt~~~~~~~~l~r~li~~l~~aLkpgG~L~g 96 (136)
T 2km1_A 54 TLENAKYETVHYLTPEAQTDIKFPKKLISVLADSLKPNGSLIG 96 (136)
T ss_dssp CCCSSSCCSEEEECCCSSCSCCCCHHHHHHHHTTCCTTCCEEC
T ss_pred cCCcccccEEEEecCCccchhhcCHHHHHHHHHHhCCCCEEEe
Confidence 45688999999654333 233458999999999999999885
No 481
>1zsy_A Mitochondrial 2-enoyl thioester reductase; medium-chain dehydrogenase/reductase, oxidoreductase, 2-ENOY thioester reductase; 1.75A {Homo sapiens} PDB: 2vcy_A
Probab=74.26 E-value=15 Score=33.19 Aligned_cols=98 Identities=14% Similarity=0.160 Sum_probs=54.3
Q ss_pred hccCCCCCCeEEEEcC--ccCHHHHHHHHhCCCCeEEEE-eCCHH---HHHHHHHHHhhhCCCCCCCeEEEEe------c
Q 018740 171 GYLKPVLGGNIIDASC--GSGLFSRIFAKSGLFSLVVAL-DYSEN---MLKQCYEFVQQESNFPKENFLLVRA------D 238 (351)
Q Consensus 171 ~~l~~~~~~~vLDiGc--G~G~~~~~l~~~~~~~~v~gv-D~s~~---~~~~a~~~~~~~~g~~~~~i~~~~~------d 238 (351)
...+..++.+||-+|+ |.|.++..+++.. +.+++++ +.++. ..+.+++. | .. .++.. +
T Consensus 161 ~~~~~~~g~~VlV~Ga~G~vG~~aiqlak~~-Ga~vi~~~~~~~~~~~~~~~~~~l-----G--a~--~vi~~~~~~~~~ 230 (357)
T 1zsy_A 161 DFEQLQPGDSVIQNASNSGVGQAVIQIAAAL-GLRTINVVRDRPDIQKLSDRLKSL-----G--AE--HVITEEELRRPE 230 (357)
T ss_dssp HSSCCCTTCEEEESSTTSHHHHHHHHHHHHH-TCEEEEEECCCSCHHHHHHHHHHT-----T--CS--EEEEHHHHHSGG
T ss_pred HHhccCCCCEEEEeCCcCHHHHHHHHHHHHc-CCEEEEEecCccchHHHHHHHHhc-----C--Cc--EEEecCcchHHH
Confidence 3445667899999997 4588888887763 2355554 44432 34445432 1 11 12221 1
Q ss_pred CCCCCCCCCceeeEEeccccccCCChHHHHHHHHhcccCCcEEEEEe
Q 018740 239 ISRLPFASSSIDAVHAGAAIHCWSSPSTGVAEISRVLRPGGVFVGTT 285 (351)
Q Consensus 239 ~~~lp~~~~~fD~V~~~~vl~h~~d~~~~l~~i~~~LkpgG~li~~~ 285 (351)
+.++.-..+.+|+|+- ....+. +.+..+.|+++|.++...
T Consensus 231 ~~~~~~~~~~~Dvvid-----~~g~~~--~~~~~~~l~~~G~iv~~G 270 (357)
T 1zsy_A 231 MKNFFKDMPQPRLALN-----CVGGKS--STELLRQLARGGTMVTYG 270 (357)
T ss_dssp GGGTTSSSCCCSEEEE-----SSCHHH--HHHHHTTSCTTCEEEECC
T ss_pred HHHHHhCCCCceEEEE-----CCCcHH--HHHHHHhhCCCCEEEEEe
Confidence 1111111124898884 333222 345789999999998763
No 482
>3flo_B DNA polymerase alpha catalytic subunit A; protein-protein complex, phosphoesterase fold, OB fold, zinc motif, DNA replication, nucleus; HET: DNA; 2.50A {Saccharomyces cerevisiae}
Probab=74.16 E-value=1.4 Score=36.97 Aligned_cols=39 Identities=28% Similarity=0.548 Sum_probs=25.3
Q ss_pred CceeCCCCCCCcccccCCCcccccccCCccccccccccc
Q 018740 70 NVLACPICYKPLTWIGDSSLSIESAAGSSLQCNTCKKTY 108 (351)
Q Consensus 70 ~~l~CP~C~~~l~~~~~~~~~~~~~~~~~~~C~~C~~~~ 108 (351)
-.+.||.|+......+....+...+....+.|++|+..+
T Consensus 21 l~l~Cp~C~~~~~F~gv~~~~~~~~~~sg~~C~~C~~~~ 59 (206)
T 3flo_B 21 LELSCPSCDKRFPFGGIVSSNYYRVSYNGLQCKHCEQLF 59 (206)
T ss_dssp EEEECTTTCCEEEECSSSCCSSEEEETTEEEETTTCCBC
T ss_pred eEEECCCCCCccCCCCcccCCCcccccccccCCCCCCcC
Confidence 357899999865555433222222566788999998753
No 483
>2x9g_A PTR1, pteridine reductase; short chain dehydrogenase, oxidoreductase; HET: NAP LYA; 1.10A {Trypanosoma brucei brucei} PDB: 2x9n_A* 2x9v_A* 3bmc_A* 3bmd_A* 3bme_A* 3bmf_A* 3bmg_A* 3bmh_A* 3bmi_A* 3bmj_A* 3bmk_A* 3bml_A* 3bmm_A* 3bmn_A* 3bmo_A* 3bmq_A* 3bmr_A* 3gn1_A* 3gn2_A* 3jq6_A* ...
Probab=73.93 E-value=16 Score=31.70 Aligned_cols=76 Identities=11% Similarity=0.108 Sum_probs=50.4
Q ss_pred CCCeEEEEcCccCH---HHHHHHHhCCCCeEEEEeCCH-HHHHHHHHHHh-hhCCCCCCCeEEEEecCCC----CC----
Q 018740 177 LGGNIIDASCGSGL---FSRIFAKSGLFSLVVALDYSE-NMLKQCYEFVQ-QESNFPKENFLLVRADISR----LP---- 243 (351)
Q Consensus 177 ~~~~vLDiGcG~G~---~~~~l~~~~~~~~v~gvD~s~-~~~~~a~~~~~-~~~g~~~~~i~~~~~d~~~----lp---- 243 (351)
.++++|=.|++.|. ++..|++.|. +|+.++.++ ..++...+.+. .. ..++.++.+|+.+ ..
T Consensus 22 ~~k~~lVTGas~gIG~aia~~L~~~G~--~V~~~~r~~~~~~~~~~~~l~~~~----~~~~~~~~~Dv~~~~~~~~~v~~ 95 (288)
T 2x9g_A 22 EAPAAVVTGAAKRIGRAIAVKLHQTGY--RVVIHYHNSAEAAVSLADELNKER----SNTAVVCQADLTNSNVLPASCEE 95 (288)
T ss_dssp CCCEEEETTCSSHHHHHHHHHHHHHTC--EEEEEESSCHHHHHHHHHHHHHHS----TTCEEEEECCCSCSTTHHHHHHH
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCC--eEEEEeCCchHHHHHHHHHHHhhc----CCceEEEEeecCCccCCHHHHHH
Confidence 35678888876542 4555666776 899999887 66655555444 22 3578899999987 21
Q ss_pred -C-----CCCceeeEEecccc
Q 018740 244 -F-----ASSSIDAVHAGAAI 258 (351)
Q Consensus 244 -~-----~~~~fD~V~~~~vl 258 (351)
+ .-+..|+++.+..+
T Consensus 96 ~~~~~~~~~g~iD~lvnnAG~ 116 (288)
T 2x9g_A 96 IINSCFRAFGRCDVLVNNASA 116 (288)
T ss_dssp HHHHHHHHHSCCCEEEECCCC
T ss_pred HHHHHHHhcCCCCEEEECCCC
Confidence 0 01368999987654
No 484
>1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of seven strands in the order 3214567; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=73.87 E-value=6.4 Score=34.07 Aligned_cols=78 Identities=17% Similarity=0.204 Sum_probs=48.9
Q ss_pred CCeEEEEcCccCH---HHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHhhhCCCCCCCeEEEEecCCCCC-----CC----
Q 018740 178 GGNIIDASCGSGL---FSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLP-----FA---- 245 (351)
Q Consensus 178 ~~~vLDiGcG~G~---~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~g~~~~~i~~~~~d~~~lp-----~~---- 245 (351)
++++|=.|++.|. ....|++.|. +|+.++.++..++...+.+... .....++.++.+|+.+.. +.
T Consensus 6 ~k~vlVTGas~gIG~~ia~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 82 (278)
T 1spx_A 6 EKVAIITGSSNGIGRATAVLFAREGA--KVTITGRHAERLEETRQQILAA-GVSEQNVNSVVADVTTDAGQDEILSTTLG 82 (278)
T ss_dssp TCEEEETTTTSHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHHHT-TCCGGGEEEEECCTTSHHHHHHHHHHHHH
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHHhc-ccCCCceeEEecccCCHHHHHHHHHHHHH
Confidence 5578888865442 4455566666 9999999987776665554211 001346888999987642 00
Q ss_pred -CCceeeEEecccc
Q 018740 246 -SSSIDAVHAGAAI 258 (351)
Q Consensus 246 -~~~fD~V~~~~vl 258 (351)
-+..|+++.+..+
T Consensus 83 ~~g~id~lv~~Ag~ 96 (278)
T 1spx_A 83 KFGKLDILVNNAGA 96 (278)
T ss_dssp HHSCCCEEEECCC-
T ss_pred HcCCCCEEEECCCC
Confidence 1368999987654
No 485
>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*
Probab=73.82 E-value=1.6 Score=40.80 Aligned_cols=42 Identities=21% Similarity=0.132 Sum_probs=30.8
Q ss_pred CCCeEEEEcCcc-CHHHHHHHHhCCCCeEEEEeCCHHHHHHHHH
Q 018740 177 LGGNIIDASCGS-GLFSRIFAKSGLFSLVVALDYSENMLKQCYE 219 (351)
Q Consensus 177 ~~~~vLDiGcG~-G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~ 219 (351)
++.+|+=+|+|. |.....+++.. +.+|+++|.++..++.+++
T Consensus 171 ~g~~V~ViGaG~iG~~aa~~a~~~-Ga~V~v~D~~~~~~~~~~~ 213 (401)
T 1x13_A 171 PPAKVMVIGAGVAGLAAIGAANSL-GAIVRAFDTRPEVKEQVQS 213 (401)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHT-TCEEEEECSCGGGHHHHHH
T ss_pred CCCEEEEECCCHHHHHHHHHHHHC-CCEEEEEcCCHHHHHHHHH
Confidence 467999999986 66555555543 2489999999987777644
No 486
>3gqv_A Enoyl reductase; medium-chain reductase (MDR superfamily), rossmann fold, NAD binding, oxidoreductase; HET: NAP; 1.74A {Aspergillus terreus} PDB: 3b6z_A* 3b70_A*
Probab=73.82 E-value=17 Score=33.00 Aligned_cols=93 Identities=9% Similarity=0.050 Sum_probs=58.2
Q ss_pred CCCCeEEEEcCc--cCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHhhhCCCCCCCeEEEEecCCCC-----CCCCCc
Q 018740 176 VLGGNIIDASCG--SGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRL-----PFASSS 248 (351)
Q Consensus 176 ~~~~~vLDiGcG--~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~g~~~~~i~~~~~d~~~l-----p~~~~~ 248 (351)
.++.+||=+|++ .|.++..+++.. ..+|+++. ++.-++.+++. .. -..+...-.++ ....+.
T Consensus 163 ~~g~~VlV~Ga~G~vG~~a~qla~~~-Ga~Vi~~~-~~~~~~~~~~l--------Ga-~~vi~~~~~~~~~~v~~~t~g~ 231 (371)
T 3gqv_A 163 SKPVYVLVYGGSTATATVTMQMLRLS-GYIPIATC-SPHNFDLAKSR--------GA-EEVFDYRAPNLAQTIRTYTKNN 231 (371)
T ss_dssp SSCCEEEEESTTSHHHHHHHHHHHHT-TCEEEEEE-CGGGHHHHHHT--------TC-SEEEETTSTTHHHHHHHHTTTC
T ss_pred CCCcEEEEECCCcHHHHHHHHHHHHC-CCEEEEEe-CHHHHHHHHHc--------CC-cEEEECCCchHHHHHHHHccCC
Confidence 668899999983 688888888764 34898885 88777777653 11 11222111111 012345
Q ss_pred eeeEEeccccccCCChHHHHHHHHhcc-cCCcEEEEEe
Q 018740 249 IDAVHAGAAIHCWSSPSTGVAEISRVL-RPGGVFVGTT 285 (351)
Q Consensus 249 fD~V~~~~vl~h~~d~~~~l~~i~~~L-kpgG~li~~~ 285 (351)
+|+|+- ....+ ..+....+.| +++|.++...
T Consensus 232 ~d~v~d-----~~g~~-~~~~~~~~~l~~~~G~iv~~g 263 (371)
T 3gqv_A 232 LRYALD-----CITNV-ESTTFCFAAIGRAGGHYVSLN 263 (371)
T ss_dssp CCEEEE-----SSCSH-HHHHHHHHHSCTTCEEEEESS
T ss_pred ccEEEE-----CCCch-HHHHHHHHHhhcCCCEEEEEe
Confidence 999884 33333 3467777888 6999988754
No 487
>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2
Probab=73.33 E-value=25 Score=30.16 Aligned_cols=77 Identities=16% Similarity=0.232 Sum_probs=49.8
Q ss_pred CCeEEEEcCccCH---HHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHhhhCCCCCCCeEEEEecCCCCCC-----C----
Q 018740 178 GGNIIDASCGSGL---FSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLPF-----A---- 245 (351)
Q Consensus 178 ~~~vLDiGcG~G~---~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~g~~~~~i~~~~~d~~~lp~-----~---- 245 (351)
+++||=.|++.|. ++..|++.|. +|++++.++..++...+.+... +. ..++.++.+|+.+..- .
T Consensus 32 ~k~vlVTGasggIG~~la~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~-~~-~~~~~~~~~Dl~~~~~v~~~~~~~~~ 107 (279)
T 1xg5_A 32 DRLALVTGASGGIGAAVARALVQQGL--KVVGCARTVGNIEELAAECKSA-GY-PGTLIPYRCDLSNEEDILSMFSAIRS 107 (279)
T ss_dssp TCEEEEESTTSHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHHHT-TC-SSEEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCC--EEEEEECChHHHHHHHHHHHhc-CC-CceEEEEEecCCCHHHHHHHHHHHHH
Confidence 5688888865442 3445556665 9999999987776665555443 11 2457888999876420 0
Q ss_pred -CCceeeEEecccc
Q 018740 246 -SSSIDAVHAGAAI 258 (351)
Q Consensus 246 -~~~fD~V~~~~vl 258 (351)
.+.+|+|+.+..+
T Consensus 108 ~~g~iD~vi~~Ag~ 121 (279)
T 1xg5_A 108 QHSGVDICINNAGL 121 (279)
T ss_dssp HHCCCSEEEECCCC
T ss_pred hCCCCCEEEECCCC
Confidence 1368999987654
No 488
>3dmg_A Probable ribosomal RNA small subunit methyltransf; monomethyltranserase, 16S rRNA methyltransferase, N2 G1207 methyltransferase; HET: SAH; 1.55A {Thermus thermophilus} PDB: 3dmf_A* 3dmh_A* 2zul_A* 2zwv_A*
Probab=73.14 E-value=9.5 Score=35.13 Aligned_cols=108 Identities=18% Similarity=0.134 Sum_probs=65.4
Q ss_pred HHHHHhccCCCCCCeEEEEcCccCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHhhhCCCCCCCeEEEEecCCCCCCC
Q 018740 166 FELMKGYLKPVLGGNIIDASCGSGLFSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLPFA 245 (351)
Q Consensus 166 ~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~g~~~~~i~~~~~d~~~lp~~ 245 (351)
.+.+.+.+... +.+||.++-+-|.++..+... .+++.+.-|...... +..+ .-.... .......
T Consensus 35 ~~~l~~~~~~~-~~~~l~~n~~~g~~~~~~~~~---~~~~~~~~~~~~~~~----l~~~----~~~~~~----~~~~~~~ 98 (381)
T 3dmg_A 35 HDLLQKTVEPF-GERALDLNPGVGWGSLPLEGR---MAVERLETSRAAFRC----LTAS----GLQARL----ALPWEAA 98 (381)
T ss_dssp HHHHHTTCCCC-SSEEEESSCTTSTTTGGGBTT---BEEEEEECBHHHHHH----HHHT----TCCCEE----CCGGGSC
T ss_pred HHHHHHHHHHh-CCcEEEecCCCCccccccCCC---CceEEEeCcHHHHHH----HHHc----CCCccc----cCCccCC
Confidence 45667776654 469999999999877666432 277877666544433 2222 222221 1112223
Q ss_pred CCceeeEEeccccc-cCCChHHHHHHHHhcccCCcEEEEEeeccC
Q 018740 246 SSSIDAVHAGAAIH-CWSSPSTGVAEISRVLRPGGVFVGTTYIVD 289 (351)
Q Consensus 246 ~~~fD~V~~~~vl~-h~~d~~~~l~~i~~~LkpgG~li~~~~~~~ 289 (351)
...||+|+...-=+ ........|.++.+.|+|||.+++.....+
T Consensus 99 ~~~~d~v~~~~Pk~k~~~~~~~~l~~~~~~l~~g~~i~~~g~~~~ 143 (381)
T 3dmg_A 99 AGAYDLVVLALPAGRGTAYVQASLVAAARALRMGGRLYLAGDKNK 143 (381)
T ss_dssp TTCEEEEEEECCGGGCHHHHHHHHHHHHHHEEEEEEEEEEEEGGG
T ss_pred cCCCCEEEEECCcchhHHHHHHHHHHHHHhCCCCCEEEEEEccHH
Confidence 46799988532210 001124678899999999999999877654
No 489
>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}
Probab=72.64 E-value=13 Score=31.74 Aligned_cols=77 Identities=16% Similarity=0.136 Sum_probs=54.8
Q ss_pred CCCCeEEEEcCccCH---HHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHhhhCCCCCCCeEEEEecCCCCCC--------
Q 018740 176 VLGGNIIDASCGSGL---FSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLPF-------- 244 (351)
Q Consensus 176 ~~~~~vLDiGcG~G~---~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~g~~~~~i~~~~~d~~~lp~-------- 244 (351)
..+++||=.|++.|. ++..|++.|. +|+.++.++..++...+.+... ..++.++.+|+.+..-
T Consensus 27 l~~k~vlITGas~gIG~~la~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~----~~~~~~~~~D~~~~~~v~~~~~~~ 100 (262)
T 3rkr_A 27 LSGQVAVVTGASRGIGAAIARKLGSLGA--RVVLTARDVEKLRAVEREIVAA----GGEAESHACDLSHSDAIAAFATGV 100 (262)
T ss_dssp TTTCEEEESSTTSHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHHHT----TCEEEEEECCTTCHHHHHHHHHHH
T ss_pred cCCCEEEEECCCChHHHHHHHHHHHCCC--EEEEEECCHHHHHHHHHHHHHh----CCceeEEEecCCCHHHHHHHHHHH
Confidence 346788988876542 4455566666 8999999998888777776655 5678999999976420
Q ss_pred --CCCceeeEEecccc
Q 018740 245 --ASSSIDAVHAGAAI 258 (351)
Q Consensus 245 --~~~~fD~V~~~~vl 258 (351)
..+..|+++.+..+
T Consensus 101 ~~~~g~id~lv~~Ag~ 116 (262)
T 3rkr_A 101 LAAHGRCDVLVNNAGV 116 (262)
T ss_dssp HHHHSCCSEEEECCCC
T ss_pred HHhcCCCCEEEECCCc
Confidence 11468999987665
No 490
>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis}
Probab=72.44 E-value=14 Score=31.49 Aligned_cols=77 Identities=16% Similarity=0.157 Sum_probs=55.6
Q ss_pred CCCeEEEEcCccCH---HHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHhhhCCCCCCCeEEEEecCCCCCC---------
Q 018740 177 LGGNIIDASCGSGL---FSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLPF--------- 244 (351)
Q Consensus 177 ~~~~vLDiGcG~G~---~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~g~~~~~i~~~~~d~~~lp~--------- 244 (351)
.++++|=.|++.|. .+..|++.|. +|+.+|.++..++...+.+... ..++.++.+|+.+..-
T Consensus 11 ~~k~vlVTGas~gIG~~ia~~l~~~G~--~V~~~~r~~~~~~~~~~~~~~~----~~~~~~~~~Dv~d~~~v~~~~~~~~ 84 (256)
T 3gaf_A 11 NDAVAIVTGAAAGIGRAIAGTFAKAGA--SVVVTDLKSEGAEAVAAAIRQA----GGKAIGLECNVTDEQHREAVIKAAL 84 (256)
T ss_dssp TTCEEEECSCSSHHHHHHHHHHHHHTC--EEEEEESSHHHHHHHHHHHHHT----TCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHHhc----CCcEEEEECCCCCHHHHHHHHHHHH
Confidence 36688888876653 4566677776 9999999998887777766655 5688999999976420
Q ss_pred -CCCceeeEEeccccc
Q 018740 245 -ASSSIDAVHAGAAIH 259 (351)
Q Consensus 245 -~~~~fD~V~~~~vl~ 259 (351)
..+..|+++.+..+.
T Consensus 85 ~~~g~id~lv~nAg~~ 100 (256)
T 3gaf_A 85 DQFGKITVLVNNAGGG 100 (256)
T ss_dssp HHHSCCCEEEECCCCC
T ss_pred HHcCCCCEEEECCCCC
Confidence 013689999876543
No 491
>1twf_I B12.6, DNA-directed RNA polymerase II 14.2 kDa polypepti; transcription, mRNA, multiprotein complex; HET: UTP; 2.30A {Saccharomyces cerevisiae} SCOP: g.41.3.1 g.41.3.1 PDB: 1i3q_I 1i6h_I 1k83_I* 1nik_I 1nt9_I 1pqv_I 1r5u_I 1r9s_I* 1r9t_I* 1sfo_I* 1twa_I* 1twc_I* 1i50_I* 1twg_I* 1twh_I* 1wcm_I 1y1v_I 1y1w_I 1y1y_I 1y77_I* ...
Probab=72.40 E-value=1.5 Score=33.52 Aligned_cols=38 Identities=18% Similarity=0.239 Sum_probs=26.0
Q ss_pred CceeCCCCCCCcccccCCCcccccccCCccccccccccccccC
Q 018740 70 NVLACPICYKPLTWIGDSSLSIESAAGSSLQCNTCKKTYSGVG 112 (351)
Q Consensus 70 ~~l~CP~C~~~l~~~~~~~~~~~~~~~~~~~C~~C~~~~~~~~ 112 (351)
++.-||.|+.-|...... ......+.|+.|+..+....
T Consensus 3 ~~~FCp~CgnlL~~~~~~-----~~~~~~~~C~~C~y~~~~~~ 40 (122)
T 1twf_I 3 TFRFCRDCNNMLYPREDK-----ENNRLLFECRTCSYVEEAGS 40 (122)
T ss_dssp CCCBCSSSCCBCEEEEET-----TTTEEEEECSSSSCEEECSC
T ss_pred CCCcccccCccCcccccC-----cCCCCEEECCcCCCeeecCc
Confidence 467899999987655310 01135789999998887653
No 492
>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*
Probab=72.04 E-value=7.1 Score=34.16 Aligned_cols=93 Identities=14% Similarity=0.129 Sum_probs=55.7
Q ss_pred CeEEEEcCcc-CH-HHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHhhh------CC--CCC-------CCeEEEEecCCC
Q 018740 179 GNIIDASCGS-GL-FSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQE------SN--FPK-------ENFLLVRADISR 241 (351)
Q Consensus 179 ~~vLDiGcG~-G~-~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~------~g--~~~-------~~i~~~~~d~~~ 241 (351)
.+|.=||+|. |. ++..++..|. +|+.+|.+++.++.+++.+... .+ ... .++.. ..|..+
T Consensus 5 ~kV~VIGaG~mG~~iA~~la~~G~--~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~~i~~-~~~~~~ 81 (283)
T 4e12_A 5 TNVTVLGTGVLGSQIAFQTAFHGF--AVTAYDINTDALDAAKKRFEGLAAVYEKEVAGAADGAAQKALGGIRY-SDDLAQ 81 (283)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTC--EEEEECSSHHHHHHHHHHHHHHHHHHHHHSTTCTTTHHHHHHHHCEE-ESCHHH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCC--eEEEEeCCHHHHHHHHHHHHHHHHHHHHhcccCCHHHHHHHHcCeEE-eCCHHH
Confidence 4788888886 33 5556666676 9999999999888887653211 00 000 01222 223221
Q ss_pred CCCCCCceeeEEeccccccCCC----hHHHHHHHHhcccCCcEEE
Q 018740 242 LPFASSSIDAVHAGAAIHCWSS----PSTGVAEISRVLRPGGVFV 282 (351)
Q Consensus 242 lp~~~~~fD~V~~~~vl~h~~d----~~~~l~~i~~~LkpgG~li 282 (351)
. -...|+|+. .+++ ...+++++...++|+.+++
T Consensus 82 ~---~~~aDlVi~-----av~~~~~~~~~v~~~l~~~~~~~~il~ 118 (283)
T 4e12_A 82 A---VKDADLVIE-----AVPESLDLKRDIYTKLGELAPAKTIFA 118 (283)
T ss_dssp H---TTTCSEEEE-----CCCSCHHHHHHHHHHHHHHSCTTCEEE
T ss_pred H---hccCCEEEE-----eccCcHHHHHHHHHHHHhhCCCCcEEE
Confidence 1 134788884 3443 2467888888898887654
No 493
>3iz5_m 60S ribosomal protein L43 (L37AE); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum} PDB: 3izr_m 1ysh_D 2zkr_z
Probab=71.78 E-value=1.6 Score=31.34 Aligned_cols=31 Identities=23% Similarity=0.315 Sum_probs=22.1
Q ss_pred CceeCCCCCCCcccccCCCcccccccCCcccccccccccc
Q 018740 70 NVLACPICYKPLTWIGDSSLSIESAAGSSLQCNTCKKTYS 109 (351)
Q Consensus 70 ~~l~CP~C~~~l~~~~~~~~~~~~~~~~~~~C~~C~~~~~ 109 (351)
..+.||.|+..-... ...++..|..|+..+-
T Consensus 35 ~ky~CpfCgk~~vkR---------~a~GIW~C~~Cg~~~A 65 (92)
T 3iz5_m 35 SKYFCEFCGKFAVKR---------KAVGIWGCKDCGKVKA 65 (92)
T ss_dssp SCBCCTTTCSSCBEE---------EETTEEECSSSCCEEE
T ss_pred ccccCcccCCCeeEe---------cCcceEEcCCCCCEEe
Confidence 347899999863222 3358899999987664
No 494
>3u6p_A Formamidopyrimidine-DNA glycosylase; DNA glycosylase, DNA repair, sequence context; HET: DNA 08Q; 1.60A {Geobacillus stearothermophilus} PDB: 3u6d_A* 3u6c_A* 3u6l_A* 3u6m_A* 3u6o_A* 3u6e_A* 3u6q_A* 3u6s_A* 3gp1_A* 3sbj_A* 2f5q_A* 2f5s_A* 3gq4_A* 3gpy_A* 2f5n_A 2f5o_A 2f5p_A 3sau_A* 3sar_A* 3sav_A* ...
Probab=71.76 E-value=0.96 Score=39.90 Aligned_cols=27 Identities=22% Similarity=0.458 Sum_probs=19.8
Q ss_pred eeCCCCCCCcccccCCCcccccccCCcccccccc
Q 018740 72 LACPICYKPLTWIGDSSLSIESAAGSSLQCNTCK 105 (351)
Q Consensus 72 l~CP~C~~~l~~~~~~~~~~~~~~~~~~~C~~C~ 105 (351)
..||.||.++..... ...+.+.|++|+
T Consensus 246 ~pC~~CG~~I~~~~~-------~gR~t~~CP~CQ 272 (273)
T 3u6p_A 246 NPCKRCGTPIEKTVV-------AGRGTHYCPRCQ 272 (273)
T ss_dssp SBCTTTCCBCEEEEE-------TTEEEEECTTTC
T ss_pred CCCCCCCCeEEEEEE-------CCCCeEECCCCC
Confidence 479999998765432 234688999997
No 495
>2pd4_A Enoyl-[acyl-carrier-protein] reductase [NADH]; antibacterial target, type II fatty acid biosynthesis, enoyl-ACP-reductase, FABI; HET: NAD DCN; 2.30A {Helicobacter pylori} SCOP: c.2.1.2 PDB: 2pd3_A*
Probab=71.47 E-value=14 Score=31.84 Aligned_cols=102 Identities=15% Similarity=0.156 Sum_probs=59.0
Q ss_pred CCeEEEEcCc--cC--H-HHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHhhhCCCCCCCeEEEEecCCCCC-----C---
Q 018740 178 GGNIIDASCG--SG--L-FSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLP-----F--- 244 (351)
Q Consensus 178 ~~~vLDiGcG--~G--~-~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~g~~~~~i~~~~~d~~~lp-----~--- 244 (351)
++++|=.|++ .| . ++..|++.|. +|+.++.++. .+...+.+... ..++.++.+|+.+.. +
T Consensus 6 ~k~vlVTGas~~~gIG~~~a~~l~~~G~--~V~~~~r~~~-~~~~~~~l~~~----~~~~~~~~~D~~~~~~v~~~~~~~ 78 (275)
T 2pd4_A 6 GKKGLIVGVANNKSIAYGIAQSCFNQGA--TLAFTYLNES-LEKRVRPIAQE----LNSPYVYELDVSKEEHFKSLYNSV 78 (275)
T ss_dssp TCEEEEECCCSTTSHHHHHHHHHHTTTC--EEEEEESSTT-THHHHHHHHHH----TTCCCEEECCTTCHHHHHHHHHHH
T ss_pred CCEEEEECCCCCCcHHHHHHHHHHHCCC--EEEEEeCCHH-HHHHHHHHHHh----cCCcEEEEcCCCCHHHHHHHHHHH
Confidence 5689999975 33 2 4445555665 8999998875 22222223222 234678889987642 0
Q ss_pred --CCCceeeEEeccccccC---------CCh--------------HHHHHHHHhcccCCcEEEEEee
Q 018740 245 --ASSSIDAVHAGAAIHCW---------SSP--------------STGVAEISRVLRPGGVFVGTTY 286 (351)
Q Consensus 245 --~~~~fD~V~~~~vl~h~---------~d~--------------~~~l~~i~~~LkpgG~li~~~~ 286 (351)
..+..|+++.+..+... .++ ..+++.+.+.++++|.++....
T Consensus 79 ~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS 145 (275)
T 2pd4_A 79 KKDLGSLDFIVHSVAFAPKEALEGSLLETSKSAFNTAMEISVYSLIELTNTLKPLLNNGASVLTLSY 145 (275)
T ss_dssp HHHTSCEEEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEEC
T ss_pred HHHcCCCCEEEECCccCccccCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhccCCEEEEEec
Confidence 12468999987654321 011 1334555666666788776654
No 496
>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2
Probab=71.40 E-value=15 Score=30.94 Aligned_cols=76 Identities=16% Similarity=0.142 Sum_probs=54.7
Q ss_pred CCeEEEEcCccCH---HHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHhhhCCCCCCCeEEEEecCCCCC----------C
Q 018740 178 GGNIIDASCGSGL---FSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLP----------F 244 (351)
Q Consensus 178 ~~~vLDiGcG~G~---~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~g~~~~~i~~~~~d~~~lp----------~ 244 (351)
++++|=.|++.|. ++..|++.|. +|+.++.++...+...+.+... ..++.++.+|+.+.. -
T Consensus 5 ~k~vlITGas~gIG~~~a~~l~~~G~--~v~~~~r~~~~~~~~~~~~~~~----~~~~~~~~~D~~~~~~~~~~~~~~~~ 78 (247)
T 3lyl_A 5 EKVALVTGASRGIGFEVAHALASKGA--TVVGTATSQASAEKFENSMKEK----GFKARGLVLNISDIESIQNFFAEIKA 78 (247)
T ss_dssp TCEEEESSCSSHHHHHHHHHHHHTTC--EEEEEESSHHHHHHHHHHHHHT----TCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHHhc----CCceEEEEecCCCHHHHHHHHHHHHH
Confidence 5678888876542 4566666676 9999999998888777766665 568899999997642 1
Q ss_pred CCCceeeEEeccccc
Q 018740 245 ASSSIDAVHAGAAIH 259 (351)
Q Consensus 245 ~~~~fD~V~~~~vl~ 259 (351)
..+..|+++.+..+.
T Consensus 79 ~~~~id~li~~Ag~~ 93 (247)
T 3lyl_A 79 ENLAIDILVNNAGIT 93 (247)
T ss_dssp TTCCCSEEEECCCCC
T ss_pred HcCCCCEEEECCCCC
Confidence 134689999876543
No 497
>3cc2_Z 50S ribosomal protein L37AE, 50S ribosomal protein L32E; genomic sequnece for R-proteins, ribonucleoprotein, ribosoma protein, RNA-binding; HET: 1MA OMU OMG UR3 PSU; 2.40A {Haloarcula marismortui} SCOP: g.41.8.1 PDB: 3cc4_Z* 3cc7_Z* 3cce_Z* 3ccj_Z* 3ccl_Z* 3ccm_Z* 3ccq_Z* 3ccr_Z* 3ccs_Z* 3ccu_Z* 3ccv_Z* 3cd6_Z* 3cma_Z* 3cme_Z* 3i55_Z* 3i56_Z* 3cpw_Y* 4adx_Z
Probab=71.33 E-value=1.3 Score=33.32 Aligned_cols=31 Identities=23% Similarity=0.430 Sum_probs=21.9
Q ss_pred CceeCCCCCCCcccccCCCcccccccCCcccccccccccc
Q 018740 70 NVLACPICYKPLTWIGDSSLSIESAAGSSLQCNTCKKTYS 109 (351)
Q Consensus 70 ~~l~CP~C~~~l~~~~~~~~~~~~~~~~~~~C~~C~~~~~ 109 (351)
....||.|+..-... ...++..|..|+..+.
T Consensus 59 akytCPfCGk~~vKR---------~avGIW~C~~Cgk~fA 89 (116)
T 3cc2_Z 59 EDHACPNCGEDRVDR---------QGTGIWQCSYCDYKFT 89 (116)
T ss_dssp SCEECSSSCCEEEEE---------EETTEEEETTTCCEEE
T ss_pred cCCcCCCCCCceeEe---------cCceeEECCCCCCEEE
Confidence 458999999732221 2247899999997764
No 498
>1k82_A Formamidopyrimidine-DNA glycosylase; protein-DNA complex, DNA repair, beta sandwich, zinc finger, helix two-turns helix, hydrolase/DNA complex; HET: PED; 2.10A {Escherichia coli} SCOP: a.156.1.2 b.113.1.1 g.39.1.8
Probab=71.02 E-value=1 Score=39.61 Aligned_cols=27 Identities=22% Similarity=0.657 Sum_probs=19.9
Q ss_pred eeCCCCCCCcccccCCCcccccccCCcccccccc
Q 018740 72 LACPICYKPLTWIGDSSLSIESAAGSSLQCNTCK 105 (351)
Q Consensus 72 l~CP~C~~~l~~~~~~~~~~~~~~~~~~~C~~C~ 105 (351)
.-||.||.++..... ...+.+.|+.|+
T Consensus 241 ~pC~~CG~~I~~~~~-------~gR~t~~CP~CQ 267 (268)
T 1k82_A 241 EPCRVCGTPIVATKH-------AQRATFYCRQCQ 267 (268)
T ss_dssp SBCTTTCCBCEEEEE-------TTEEEEECTTTC
T ss_pred CCCCCCCCEeeEEEE-------CCCceEECCCCC
Confidence 459999998765432 234788999997
No 499
>3icc_A Putative 3-oxoacyl-(acyl carrier protein) reducta; structural genomics, putative 3-oxoacyl-(acyl carrier protei reductase, oxidoreductase; HET: NAP MES; 1.87A {Bacillus anthracis str}
Probab=70.87 E-value=11 Score=31.89 Aligned_cols=104 Identities=14% Similarity=0.141 Sum_probs=63.4
Q ss_pred CCeEEEEcCccCH---HHHHHHHhCCCCeEEEE-eCCHHHHHHHHHHHhhhCCCCCCCeEEEEecCCCCCC---------
Q 018740 178 GGNIIDASCGSGL---FSRIFAKSGLFSLVVAL-DYSENMLKQCYEFVQQESNFPKENFLLVRADISRLPF--------- 244 (351)
Q Consensus 178 ~~~vLDiGcG~G~---~~~~l~~~~~~~~v~gv-D~s~~~~~~a~~~~~~~~g~~~~~i~~~~~d~~~lp~--------- 244 (351)
++++|=.|++.|. ++..|++.|. +|+.+ +-+....+...+.+... ..++.++.+|+.+..-
T Consensus 7 ~k~vlITGas~gIG~~~a~~l~~~G~--~v~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~D~~~~~~~~~~~~~~~ 80 (255)
T 3icc_A 7 GKVALVTGASRGIGRAIAKRLANDGA--LVAIHYGNRKEEAEETVYEIQSN----GGSAFSIGANLESLHGVEALYSSLD 80 (255)
T ss_dssp TCEEEETTCSSHHHHHHHHHHHHTTC--EEEEEESSCSHHHHHHHHHHHHT----TCEEEEEECCTTSHHHHHHHHHHHH
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCC--eEEEEeCCchHHHHHHHHHHHhc----CCceEEEecCcCCHHHHHHHHHHHH
Confidence 5688888876653 4556666676 88775 55555555555555544 4678888899876420
Q ss_pred -------CCCceeeEEeccccccCC-----Ch--------------HHHHHHHHhcccCCcEEEEEeec
Q 018740 245 -------ASSSIDAVHAGAAIHCWS-----SP--------------STGVAEISRVLRPGGVFVGTTYI 287 (351)
Q Consensus 245 -------~~~~fD~V~~~~vl~h~~-----d~--------------~~~l~~i~~~LkpgG~li~~~~~ 287 (351)
..+..|+++.+..+.... +. ..+++.+...++++|.++.....
T Consensus 81 ~~~~~~~~~~~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~iv~isS~ 149 (255)
T 3icc_A 81 NELQNRTGSTKFDILINNAGIGPGAFIEETTEQFFDRMVSVNAKAPFFIIQQALSRLRDNSRIINISSA 149 (255)
T ss_dssp HHHHHHHSSSCEEEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEECCG
T ss_pred HHhcccccCCcccEEEECCCCCCCCChhhCCHHHHHHHHhhhchHHHHHHHHHHHhhCCCCEEEEeCCh
Confidence 013489999876543221 11 12345555666677887776543
No 500
>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber}
Probab=70.86 E-value=16 Score=31.56 Aligned_cols=76 Identities=12% Similarity=0.123 Sum_probs=54.5
Q ss_pred CCeEEEEcCccCH---HHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHhhhCCCCCCCeEEEEecCCCCC-----C-----
Q 018740 178 GGNIIDASCGSGL---FSRIFAKSGLFSLVVALDYSENMLKQCYEFVQQESNFPKENFLLVRADISRLP-----F----- 244 (351)
Q Consensus 178 ~~~vLDiGcG~G~---~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~g~~~~~i~~~~~d~~~lp-----~----- 244 (351)
++++|=.|++.|. .+..|++.|. +|+.++.++..++...+.+... ..++.++.+|+.+.. +
T Consensus 24 ~k~~lVTGas~GIG~aia~~la~~G~--~V~~~~r~~~~~~~~~~~l~~~----~~~~~~~~~Dv~d~~~v~~~~~~~~~ 97 (279)
T 3sju_A 24 PQTAFVTGVSSGIGLAVARTLAARGI--AVYGCARDAKNVSAAVDGLRAA----GHDVDGSSCDVTSTDEVHAAVAAAVE 97 (279)
T ss_dssp -CEEEEESTTSHHHHHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHHTT----TCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCC--EEEEEeCCHHHHHHHHHHHHhc----CCcEEEEECCCCCHHHHHHHHHHHHH
Confidence 5689999976653 4566667776 9999999998887777766654 567899999997642 0
Q ss_pred CCCceeeEEeccccc
Q 018740 245 ASSSIDAVHAGAAIH 259 (351)
Q Consensus 245 ~~~~fD~V~~~~vl~ 259 (351)
.-+..|+++.+..+.
T Consensus 98 ~~g~id~lv~nAg~~ 112 (279)
T 3sju_A 98 RFGPIGILVNSAGRN 112 (279)
T ss_dssp HHCSCCEEEECCCCC
T ss_pred HcCCCcEEEECCCCC
Confidence 114689999876543
Done!