BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 018742
(351 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q54P70|Y4757_DICDI OTU domain-containing protein DDB_G0284757 OS=Dictyostelium
discoideum GN=DDB_G0284757 PE=4 SV=2
Length = 766
Score = 108 bits (269), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 71/190 (37%), Positives = 103/190 (54%), Gaps = 13/190 (6%)
Query: 145 ELTDEYALDGEVGKRLNQMVPV--PHVPRINGEIPSIDEATLDHQRLLERLQVYDLVEHK 202
E+ L+G V K +N + +V +P E + QRL ERL++Y L K
Sbjct: 575 EIKTNLLLEGLVLKNMNHDASLISSNVLLNLHPLPQSKEVQIAQQRLNERLELYMLKNSK 634
Query: 203 -VQGDGNCQFRALSDQIYRTAEHHEFVRQQIVAQLKSNPD--------IYEGYVPMAYGD 253
+ GDGNCQ ALSDQ+Y H + VR+ IV L+ N D I + + D
Sbjct: 635 EIPGDGNCQMHALSDQLYGDLSHSQEVRKTIVDWLRKNKDFQLPNGATICQFVNTNNWDD 694
Query: 254 YLEKMSESGEWGDHVTLQAAADLYGVKIFVITSF--KDTCYIEILPNVERSIRVIYLSFW 311
Y MS++G WGDH+TL AAA+ +G KI +I+S + +IEI+P+ + +V+ LS +
Sbjct: 695 YCNDMSKNGNWGDHLTLLAAAEHFGSKISIISSVESQSNFFIEIIPSKILNDKVLLLSHY 754
Query: 312 AEVHYNSIYP 321
AE HY S+ P
Sbjct: 755 AEFHYGSLCP 764
>sp|Q08BW0|OTU5A_DANRE OTU domain-containing protein 5-A OS=Danio rerio GN=otud5a PE=2
SV=1
Length = 560
Score = 67.4 bits (163), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/124 (31%), Positives = 65/124 (52%), Gaps = 5/124 (4%)
Query: 198 LVEHKVQGDGNCQFRALSDQIYRTAEHHEFVRQQIVAQLKSNPDIYEGYVPMAYGDYLEK 257
V K++ DG C FRA++DQ+Y + HE VR+ + L N D + YV + Y+ +
Sbjct: 211 FVIKKMKEDGACLFRAVADQVYGDQDMHEVVRKHCMDYLMKNADYFSNYVTEDFTTYINR 270
Query: 258 MSESGEWGDHVTLQAAADLYGVKIFVITSFKD--TCYIEILPNVERSIRVIYLSFWAEVH 315
++ G+H+ +QA A++Y + V S + + I N + IRV S+ +H
Sbjct: 271 KRKNNCHGNHIEMQAMAEMYNRPVEVYQSGTEPINTFHGIHQNNDEPIRV---SYHRNIH 327
Query: 316 YNSI 319
YNS+
Sbjct: 328 YNSV 331
>sp|Q2YDU3|OTUD5_RAT OTU domain-containing protein 5 OS=Rattus norvegicus GN=Otud5 PE=2
SV=2
Length = 566
Score = 67.0 bits (162), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 42/151 (27%), Positives = 78/151 (51%), Gaps = 8/151 (5%)
Query: 174 GEIPSIDEATLDHQRLLERLQVYD---LVEHKVQGDGNCQFRALSDQIYRTAEHHEFVRQ 230
I ++D AT++ Q + D + +++ DG C FRA++DQ+Y + HE VR+
Sbjct: 186 ARIEAMDPATVEQQEHWFEKALRDKKGFIIKQMKEDGACLFRAVADQVYGDQDMHEVVRK 245
Query: 231 QIVAQLKSNPDIYEGYVPMAYGDYLEKMSESGEWGDHVTLQAAADLYG--VKIFVITSFK 288
+ L N D + YV + Y+ + ++ G+H+ +QA A++Y V+++ ++
Sbjct: 246 HCMDYLMKNADYFSNYVTEDFTTYINRKRKNNCHGNHIEMQAMAEMYNRPVEVYQYSTEP 305
Query: 289 DTCYIEILPNVERSIRVIYLSFWAEVHYNSI 319
+ I N + IRV S+ +HYNS+
Sbjct: 306 INTFHGIHQNEDEPIRV---SYHRNIHYNSV 333
>sp|Q3U2S4|OTUD5_MOUSE OTU domain-containing protein 5 OS=Mus musculus GN=Otud5 PE=1 SV=2
Length = 566
Score = 67.0 bits (162), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 42/151 (27%), Positives = 78/151 (51%), Gaps = 8/151 (5%)
Query: 174 GEIPSIDEATLDHQRLLERLQVYD---LVEHKVQGDGNCQFRALSDQIYRTAEHHEFVRQ 230
I ++D AT++ Q + D + +++ DG C FRA++DQ+Y + HE VR+
Sbjct: 186 ARIEAMDPATVEQQEHWFEKALRDKKGFIIKQMKEDGACLFRAVADQVYGDQDMHEVVRK 245
Query: 231 QIVAQLKSNPDIYEGYVPMAYGDYLEKMSESGEWGDHVTLQAAADLYG--VKIFVITSFK 288
+ L N D + YV + Y+ + ++ G+H+ +QA A++Y V+++ ++
Sbjct: 246 HCMDYLMKNADYFSNYVTEDFTTYINRKRKNNCHGNHIEMQAMAEMYNRPVEVYQYSTEP 305
Query: 289 DTCYIEILPNVERSIRVIYLSFWAEVHYNSI 319
+ I N + IRV S+ +HYNS+
Sbjct: 306 INTFHGIHQNEDEPIRV---SYHRNIHYNSV 333
>sp|Q96G74|OTUD5_HUMAN OTU domain-containing protein 5 OS=Homo sapiens GN=OTUD5 PE=1 SV=1
Length = 571
Score = 67.0 bits (162), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 76/156 (48%), Gaps = 13/156 (8%)
Query: 174 GEIPSIDEATLDHQRLLERLQVYD---LVEHKVQGDGNCQFRALSDQIYRTAEHHEFVRQ 230
I ++D AT++ Q + D + +++ DG C FRA++DQ+Y + HE VR+
Sbjct: 186 ARIEAMDPATVEQQEHWFEKALRDKKGFIIKQMKEDGACLFRAVADQVYGDQDMHEVVRK 245
Query: 231 QIVAQLKSNPDIYEGYVPMAYGDYLEKMSESGEWGDHVTLQAAADLYGVKIFVITSFKDT 290
+ L N D + YV + Y+ + ++ G+H+ +QA A++Y + V T
Sbjct: 246 HCMDYLMKNADYFSNYVTEDFTTYINRKRKNNCHGNHIEMQAMAEMYNRPVEVYQYSTGT 305
Query: 291 CYIE-------ILPNVERSIRVIYLSFWAEVHYNSI 319
+E I N + IRV S+ +HYNS+
Sbjct: 306 SAVEPINTFHGIHQNEDEPIRV---SYHRNIHYNSV 338
>sp|Q7ZX21|OTU5A_XENLA OTU domain-containing protein 5-A OS=Xenopus laevis GN=otud5-a PE=2
SV=1
Length = 513
Score = 66.6 bits (161), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 41/146 (28%), Positives = 74/146 (50%), Gaps = 8/146 (5%)
Query: 179 IDEATLDHQRLLERLQVYD---LVEHKVQGDGNCQFRALSDQIYRTAEHHEFVRQQIVAQ 235
+D T + Q L + D + +++ DG C FRA++DQ+Y + HE VR+ +
Sbjct: 144 LDPDTAEQQELCFEKTLSDKKGFIIKQMKEDGACLFRAVADQVYGDQDMHEVVRKHCMDY 203
Query: 236 LKSNPDIYEGYVPMAYGDYLEKMSESGEWGDHVTLQAAADLYG--VKIFVITSFKDTCYI 293
L N D + YV + Y+ + ++ G+H+ +QA A++Y V+++ + +
Sbjct: 204 LMKNADYFSNYVTEDFTTYINRKRKNNCHGNHIEMQAMAEMYNRPVEVYQYGTEPINTFH 263
Query: 294 EILPNVERSIRVIYLSFWAEVHYNSI 319
I N + IRV S+ +HYNS+
Sbjct: 264 GIQKNEDEPIRV---SYHRNIHYNSV 286
>sp|Q640H3|OTU5B_XENLA OTU domain-containing protein 5-B OS=Xenopus laevis GN=otud5-b PE=2
SV=1
Length = 518
Score = 64.7 bits (156), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 36/124 (29%), Positives = 66/124 (53%), Gaps = 5/124 (4%)
Query: 198 LVEHKVQGDGNCQFRALSDQIYRTAEHHEFVRQQIVAQLKSNPDIYEGYVPMAYGDYLEK 257
+ +++ DG C FRA++DQ+Y + HE VR+ + L N D + YV + Y+ +
Sbjct: 171 FIIKQMKEDGACLFRAVADQVYGDQDMHEVVRKHCMDYLMKNADYFSNYVTEDFTTYINR 230
Query: 258 MSESGEWGDHVTLQAAADLYG--VKIFVITSFKDTCYIEILPNVERSIRVIYLSFWAEVH 315
++ G+H+ +QA A++Y V+++ + + I N + IRV S+ +H
Sbjct: 231 KRKNNCHGNHIEMQAMAEMYNRPVEVYQYGTEPINTFHGIQQNEDEPIRV---SYHRNIH 287
Query: 316 YNSI 319
YNS+
Sbjct: 288 YNSV 291
>sp|Q6GL44|OTUD5_XENTR OTU domain-containing protein 5 OS=Xenopus tropicalis GN=otud5 PE=2
SV=1
Length = 518
Score = 64.7 bits (156), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 36/124 (29%), Positives = 66/124 (53%), Gaps = 5/124 (4%)
Query: 198 LVEHKVQGDGNCQFRALSDQIYRTAEHHEFVRQQIVAQLKSNPDIYEGYVPMAYGDYLEK 257
+ +++ DG C FRA++DQ+Y + HE VR+ + L N D + YV + Y+ +
Sbjct: 171 FIIKQMKEDGACLFRAVADQVYGDQDMHEVVRKHCMDYLMKNADYFSNYVTEDFTTYINR 230
Query: 258 MSESGEWGDHVTLQAAADLYG--VKIFVITSFKDTCYIEILPNVERSIRVIYLSFWAEVH 315
++ G+H+ +QA A++Y V+++ + + I N + IRV S+ +H
Sbjct: 231 KRKNNCHGNHIEMQAMAEMYNRPVEVYQYGTEPINTFHGIQQNEDEPIRV---SYHRNIH 287
Query: 316 YNSI 319
YNS+
Sbjct: 288 YNSV 291
>sp|Q9D8C3|ALG13_MOUSE UDP-N-acetylglucosamine transferase subunit ALG13 homolog OS=Mus
musculus GN=Alg13 PE=2 SV=2
Length = 1166
Score = 61.2 bits (147), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/143 (27%), Positives = 72/143 (50%), Gaps = 8/143 (5%)
Query: 178 SIDEATLDHQRLLERLQVYDLVEHKVQGDGNCQFRALSDQIYRTAEHHEFVRQQIVAQLK 237
S++EA++D E L L V D +C FRA+S+Q++ + HH +R+ V+ +K
Sbjct: 210 SLNEASMD-----EYLGSLGLFRKVVAKDASCLFRAISEQLFHSQIHHLQIRRACVSYMK 264
Query: 238 SNPDIYEGYVPMAYGDYLEKMSESGEWGDHVTLQAAADLYGVKIFVITSFKDTCYIEILP 297
N +E YV ++ YLE++ + E + L+A + +Y + F+I + ++
Sbjct: 265 ENQQAFESYVEGSFEKYLERLGDPKESAGQLELKALSLIYN-RDFIIYRYPGKPPTQVTD 323
Query: 298 NVERSIRVIYLSFWAEVHYNSIY 320
N I L + HY+S+Y
Sbjct: 324 NGFED--KIILCYSNNGHYDSVY 344
>sp|P22856|VL96_IRV1 Putative ubiquitin thioesterase L96 OS=Tipula iridescent virus
GN=L96 PE=3 SV=1
Length = 867
Score = 58.9 bits (141), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 72/150 (48%), Gaps = 21/150 (14%)
Query: 189 LLERLQVYDLVEHKVQGDGNCQFRALSDQIYRTAE---HHEFVRQQIVAQLKSNPDIYEG 245
+L R + Y ++ V+GDGNC FRA+ + HE +R Q+V L S+ + E
Sbjct: 599 ILARRRGYKVIP--VKGDGNCLFRAVGKSLRLNQNIKYSHEDLRAQVVTYLTSHKEFLEP 656
Query: 246 YV----------PMAYGD----YLEKMSESGEWGDHVTLQAAADLYGVKIFVITSFKDTC 291
Y+ P Y Y++ +S+ G WGD + L+ +++ VK ++ +T
Sbjct: 657 YLEYVTESGDTTPQEYAKNVERYIKNISKPGTWGDFICLRVLSEILKVKFNLL--ILNTR 714
Query: 292 YIEILPNVERSIRVIYLSFWAEVHYNSIYP 321
+++ N + +I L F + HY ++ P
Sbjct: 715 NFQVISNNDTFKPLIPLGFIDDYHYTALTP 744
>sp|Q196X6|VF232_IIV3 Putative ubiquitin thioesterase 232R OS=Invertebrate iridescent
virus 3 GN=IIV3-084L PE=3 SV=1
Length = 844
Score = 57.8 bits (138), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/172 (27%), Positives = 79/172 (45%), Gaps = 27/172 (15%)
Query: 167 PHVPRINGEIPSIDEATLDHQRLLERL-QVYDLVEHKVQGDGNCQFRALSDQIYRTAEHH 225
P +P+ G P D LE+L Q +V GDGNC FR++ I R
Sbjct: 567 PELPKYKGRTPYTD---------LEQLAQSKGYTVKQVSGDGNCLFRSVCKSI-RALRGE 616
Query: 226 EF----VRQQIVAQLKSNPD---IYEGYVPMAYGD-------YLEKMSESGEWGDHVTLQ 271
+F +RQ +V L+ NP+ +Y YV + YL +MS+ G WGD + L+
Sbjct: 617 KFTHRQLRQMVVDYLRENPEFLQVYLEYVARQRDNSLPSTEQYLSEMSKCGTWGDLICLK 676
Query: 272 AAADLYGVKIFVITSFKDTCYIEILPNVERSIRVIYLSFWAEVHYNSIYPAG 323
+++ V+ ++ +T +++ + + VI L + HY S+ P G
Sbjct: 677 TLSEILKVQFNLL--ILNTKQFQMVSSQDDYPDVIPLGYIDNYHYTSLVPIG 726
>sp|Q9NP73|ALG13_HUMAN UDP-N-acetylglucosamine transferase subunit ALG13 homolog OS=Homo
sapiens GN=ALG13 PE=1 SV=2
Length = 1137
Score = 57.8 bits (138), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/143 (25%), Positives = 71/143 (49%), Gaps = 8/143 (5%)
Query: 178 SIDEATLDHQRLLERLQVYDLVEHKVQGDGNCQFRALSDQIYRTAEHHEFVRQQIVAQLK 237
S++EA++D E L L D +C FRA+S+Q++ + HH +R+ V+ ++
Sbjct: 216 SLNEASMD-----EYLGSLGLFRKLTAKDASCLFRAISEQLFCSQVHHLEIRKACVSYMR 270
Query: 238 SNPDIYEGYVPMAYGDYLEKMSESGEWGDHVTLQAAADLYGVKIFVITSFKDTCYIEILP 297
N +E YV ++ YLE++ + E + ++A + +Y + F++ F +
Sbjct: 271 ENQQTFESYVEGSFEKYLERLGDPKESAGQLEIRALSLIYN-RDFILYRFPGKPPTYVTD 329
Query: 298 NVERSIRVIYLSFWAEVHYNSIY 320
N I L + + HY+S+Y
Sbjct: 330 NGYED--KILLCYSSSGHYDSVY 350
>sp|B2RRE7|OTUD4_MOUSE OTU domain-containing protein 4 OS=Mus musculus GN=Otud4 PE=1 SV=1
Length = 1107
Score = 55.8 bits (133), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 45/155 (29%), Positives = 73/155 (47%), Gaps = 22/155 (14%)
Query: 174 GEIPSIDEATLDHQRLLERLQVYDLVEHKVQGDGNCQFRALSDQIYRTAEHHEFVRQQIV 233
G P DE +D L +L +Y + V DG+C FRA+++Q+ + H VR +
Sbjct: 15 GVGPLEDETPMDA--YLRKLGLYRKL---VAKDGSCLFRAVAEQVLHSQSRHVEVRMACI 69
Query: 234 AQLKSNPDIYEGYVPMAYGDYLEKMSESGEWGDHVTLQAAADLYGVKIFVITSFKDTCYI 293
L+ N + +E ++ ++ +YL+++ EW V + A + +Y K FVI Y
Sbjct: 70 RYLRENREKFEAFIEGSFEEYLKRLENPQEWVGQVEISALSLMY-RKDFVI-------YQ 121
Query: 294 EILPNVERS-------IRVIYLSFWAEVHYNSIYP 321
E PNV S + L F HY+ +YP
Sbjct: 122 E--PNVSPSHVTENNFPEKVLLCFSNGNHYDIVYP 154
>sp|Q01804|OTUD4_HUMAN OTU domain-containing protein 4 OS=Homo sapiens GN=OTUD4 PE=1 SV=3
Length = 1113
Score = 55.1 bits (131), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 38/148 (25%), Positives = 70/148 (47%), Gaps = 8/148 (5%)
Query: 174 GEIPSIDEATLDHQRLLERLQVYDLVEHKVQGDGNCQFRALSDQIYRTAEHHEFVRQQIV 233
G P D +D L +L +Y + V DG+C FRA+++Q+ + H VR +
Sbjct: 15 GAGPREDATPMDA--YLRKLGLYRKL---VAKDGSCLFRAVAEQVLHSQSRHVEVRMACI 69
Query: 234 AQLKSNPDIYEGYVPMAYGDYLEKMSESGEWGDHVTLQAAADLYGVKIFVITSFKDTCYI 293
L+ N + +E ++ ++ +YL+++ EW V + A + +Y K F+I +
Sbjct: 70 HYLRENREKFEAFIEGSFEEYLKRLENPQEWVGQVEISALSLMY-RKDFIIYREPNVSPS 128
Query: 294 EILPNVERSIRVIYLSFWAEVHYNSIYP 321
++ N + L F HY+ +YP
Sbjct: 129 QVTEN--NFPEKVLLCFSNGNHYDIVYP 154
>sp|Q7RTX8|HIN1L_HUMAN Putative HIN1-like protein OS=Homo sapiens GN=HIN1L PE=5 SV=1
Length = 443
Score = 49.7 bits (117), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 71/165 (43%), Gaps = 22/165 (13%)
Query: 164 VPVPHVPRINGEIPSIDEATLDHQRLLERLQVYDLVEHKVQGDGNCQFRALSDQIYRTAE 223
V VP G P D +D L +L +Y + V DG+C FRA+++Q+ +
Sbjct: 5 VGVPDGEDQGGAGPREDATPMDA--YLRKLGLYRKL---VAKDGSCLFRAVAEQVLHSQS 59
Query: 224 HHEFVRQQIVAQLKSNPDIYEGYVPMAYGDYLEKMSESGEWGDHVTLQAAADLYGVKIFV 283
H VR + L+ N + +E + ++ YL+++ EW + + A + +Y K F+
Sbjct: 60 RHVEVRMACIHCLRENREKFEAIIGGSFEGYLKRLENPQEWVGQMEISALSLMYR-KDFI 118
Query: 284 ITSFKDTCYIEILPNVERS-------IRVIYLSFWAEVHYNSIYP 321
+ PNV S + L F HY+ +YP
Sbjct: 119 TN---------LEPNVSPSQVTENNFPEKVLLCFSNGNHYDIVYP 154
>sp|Q9CUB6|OTUD1_MOUSE OTU domain-containing protein 1 OS=Mus musculus GN=Otud1 PE=2 SV=2
Length = 454
Score = 47.8 bits (112), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/121 (26%), Positives = 58/121 (47%), Gaps = 7/121 (5%)
Query: 206 DGNCQFRALSDQIYRTAEHHEFVRQQIVAQLKSNPDIYEGYVPMAYGDYLEKMSESGEWG 265
DGNC +RA+S +Y H +R+Q V + + D + + G+++ ++ G W
Sbjct: 290 DGNCLYRAVSKTVYGDQSLHRELREQTVHYIADHLDHFSPLIEGDVGEFIIAAAQDGAWA 349
Query: 266 DHVTLQAAADLYGVKIFVIT-----SFKDTCYIEILPNVERSIR-VIYLSFWAEVHYNSI 319
+ L A + V I + T S + I L E S+R I+LS+ + HY+++
Sbjct: 350 GYPELLAMGQMLNVNIHLTTGGRLESPTVSTMIHYL-GPEDSLRPSIWLSWLSNGHYDAV 408
Query: 320 Y 320
+
Sbjct: 409 F 409
>sp|Q5VV17|OTUD1_HUMAN OTU domain-containing protein 1 OS=Homo sapiens GN=OTUD1 PE=2 SV=1
Length = 481
Score = 47.8 bits (112), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/121 (26%), Positives = 58/121 (47%), Gaps = 7/121 (5%)
Query: 206 DGNCQFRALSDQIYRTAEHHEFVRQQIVAQLKSNPDIYEGYVPMAYGDYLEKMSESGEWG 265
DGNC +RA+S +Y H +R+Q V + + D + + G+++ ++ G W
Sbjct: 317 DGNCLYRAVSKTVYGDQSLHRELREQTVHYIADHLDHFSPLIEGDVGEFIIAAAQDGAWA 376
Query: 266 DHVTLQAAADLYGVKIFVIT-----SFKDTCYIEILPNVERSIR-VIYLSFWAEVHYNSI 319
+ L A + V I + T S + I L E S+R I+LS+ + HY+++
Sbjct: 377 GYPELLAMGQMLNVNIHLTTGGRLESPTVSTMIHYL-GPEDSLRPSIWLSWLSNGHYDAV 435
Query: 320 Y 320
+
Sbjct: 436 F 436
>sp|P10383|OTU_DROME Protein ovarian tumor locus OS=Drosophila melanogaster GN=otu PE=2
SV=2
Length = 853
Score = 43.9 bits (102), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/128 (22%), Positives = 55/128 (42%), Gaps = 3/128 (2%)
Query: 193 LQVYDLVEHKVQGDGNCQFRALSDQIYRTAEHHEFVRQQIVAQLKSNPDIYEGYVPMAYG 252
L+ L D + FR +++Q+Y T H +R + V + I+E +P +
Sbjct: 24 LESRGLYRKHTARDASSLFRVIAEQMYDTQMLHYEIRLECVRFMTLKRRIFEKEIPGDFD 83
Query: 253 DYLEKMSESGEWGDHVTLQAAADLYGVKIFVITSFKDTCYIEILPNVERSIRVIYLSFWA 312
Y++ MS+ +G L+A + LY + + + + + RV F
Sbjct: 84 SYMQDMSKPKTYGTMTELRAMSCLYRRNVILYEPYNMGTSVVFNRRYAENFRVF---FNN 140
Query: 313 EVHYNSIY 320
E H++S+Y
Sbjct: 141 ENHFDSVY 148
>sp|Q5T2D3|OTUD3_HUMAN OTU domain-containing protein 3 OS=Homo sapiens GN=OTUD3 PE=1 SV=1
Length = 398
Score = 43.5 bits (101), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 33/134 (24%), Positives = 66/134 (49%), Gaps = 4/134 (2%)
Query: 193 LQVYDLVEHKVQGDGNCQFRALSDQIYRTAEHHEFVRQQIVAQLKSNPDIYEGYVP--MA 250
LQ L +V GDGNC FRAL DQ+ + +H RQ+ V + + +E +V +
Sbjct: 60 LQALGLKLREVPGDGNCLFRALGDQLEGHSRNHLKHRQETVDYMIKQREDFEPFVEDDIP 119
Query: 251 YGDYLEKMSESGEWGDHVTLQAAADLYGVKIFVITSFKDTCYIEILPNVERSIRVIYLSF 310
+ ++ +++ G + + + A A + + + VI + +I + S+R +++++
Sbjct: 120 FEKHVASLAKPGTFAGNDAIVAFARNHQLNV-VIHQLNAPLW-QIRGTEKSSVRELHIAY 177
Query: 311 WAEVHYNSIYPAGD 324
HY+S+ D
Sbjct: 178 RYGEHYDSVRRIND 191
>sp|Q7ZV00|OTU6B_DANRE OTU domain-containing protein 6B OS=Danio rerio GN=otud6b PE=2 SV=1
Length = 293
Score = 42.0 bits (97), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 38/157 (24%), Positives = 72/157 (45%), Gaps = 17/157 (10%)
Query: 188 RLLERLQVYDLVEHKVQGDGNCQFRALSDQIYRT--AEHHEFVRQQIVAQLKS------- 238
+L E+L L ++ DG+C +RA+ Q+ A + +R Q ++S
Sbjct: 137 KLREKLVERHLQIKEISSDGHCMYRAVEHQLTERGLALGLKELRDQTAQYMRSHADDFMP 196
Query: 239 ---NPDIYEGYVPMAYGDYLEKMSESGEWGDHVTLQAAADLYGVKIFVITSFKDTCYIEI 295
NP+ + Y + Y ++++ WG + L+A + + + I VI + D+ I I
Sbjct: 197 FLTNPNTGDMYTAEEFEKYCSDVADTAAWGGQLELKALSQVLQLPIEVIQA--DSPCITI 254
Query: 296 LPNVER-SIRVIYL--SFWAEVHYNSIYPAGDVPTFE 329
++ I +IY+ ++ HYNS+ P D+ E
Sbjct: 255 GEEYDKPKITLIYMRHAYGLGEHYNSVEPLKDLANEE 291
>sp|Q7L8S5|OTU6A_HUMAN OTU domain-containing protein 6A OS=Homo sapiens GN=OTUD6A PE=2
SV=1
Length = 288
Score = 40.4 bits (93), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 32/131 (24%), Positives = 61/131 (46%), Gaps = 14/131 (10%)
Query: 203 VQGDGNCQFRALSDQIYRTAEHHEFVRQQIVAQLK----------SNPDIYEGYVPMAYG 252
+ DG+C +RA+ DQ+ + E +R + + +K SNP+ + + +
Sbjct: 146 IPADGHCMYRAIQDQLVFSVS-VEMLRCRTASYMKKHVDEFLPFFSNPETSDSFGYDDFM 204
Query: 253 DYLEKMSESGEWGDHVTLQAAADLYGVKIFVITSFKDTCYIEILPNVERSIRVIYLSFWA 312
Y + + + WG + L+A + + I VI + T I V++ I ++YL +
Sbjct: 205 IYCDNIVRTTAWGGQLELRALSHVLKTPIEVIQADSPTLIIG-EEYVKKPIILVYLRYAY 263
Query: 313 EV--HYNSIYP 321
+ HYNS+ P
Sbjct: 264 SLGEHYNSVTP 274
>sp|O13974|OTU1_SCHPO Putative ubiquitin thioesterase otu1 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=otu1 PE=1 SV=1
Length = 329
Score = 40.0 bits (92), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 44/92 (47%), Gaps = 12/92 (13%)
Query: 195 VYDLVEHKVQGDGNCQFRALSDQI-YRTAEHHEFVRQQIVAQLKSNPDIYE----GYVPM 249
+ D+ + D +C FRALS + + E E V Q++ SNPDIY G +
Sbjct: 132 IGDIALRVMPDDNSCLFRALSKPLGFSPYELREIVANQVL----SNPDIYSTAILGKPSI 187
Query: 250 AYGDYLEKMSESGEWGDHVTLQAAADLYGVKI 281
Y ++ K + WG ++ L + +GV+I
Sbjct: 188 EYASWIRKET---SWGGYIELSILSSHFGVEI 216
>sp|Q5ZIP6|OTU6B_CHICK OTU domain-containing protein 6B OS=Gallus gallus GN=OTUD6B PE=2
SV=1
Length = 302
Score = 38.1 bits (87), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 38/164 (23%), Positives = 66/164 (40%), Gaps = 27/164 (16%)
Query: 184 LDHQRLLERLQVYDLVEHKVQGDGNCQFRALSDQIYRTAEHHE-----FVRQQIVAQLKS 238
L+ Q+L L L ++ DG+C +RA+ DQ+ +HH +R Q + S
Sbjct: 142 LESQKLASLLAARHLEIKQIPSDGHCMYRAIEDQL---KDHHNSWTVATLRNQTAKYIHS 198
Query: 239 ----------NPDIYEGYVPMAYGDYLEKMSESGEWGDHVTLQAAADLYGVKIFVITSFK 288
NP+ + Y + Y + ++ + WG + L+A + + I V+
Sbjct: 199 HFDDFLPFLTNPNTGDMYSKEEFEKYCDDIANTAAWGGQLELRALSHILQTPIEVVQMDS 258
Query: 289 DTCYIEILPNVERSIRVIYLSFWAEV-----HYNSIYPAGDVPT 327
+ I+ E S + I L + HYNS+ D T
Sbjct: 259 PS----IIVGEEYSGKPIILVYMRHAYGLGEHYNSVKLLTDATT 298
>sp|Q8K2H2|OTU6B_MOUSE OTU domain-containing protein 6B OS=Mus musculus GN=Otud6b PE=2
SV=1
Length = 294
Score = 37.7 bits (86), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 26/116 (22%), Positives = 53/116 (45%), Gaps = 14/116 (12%)
Query: 184 LDHQRLLERLQVYDLVEHKVQGDGNCQFRALSDQIY-------------RTAEHHEFVRQ 230
L+ ++L + L +L ++ DG+C + AL DQ+ +TAE+ +
Sbjct: 134 LESEKLAQILAARELEIKQIPSDGHCMYGALEDQLREQDCALTVASLRRQTAEYMQTHSD 193
Query: 231 QIVAQLKSNPDIYEGYVPMAYGDYLEKMSESGEWGDHVTLQAAADLYGVKIFVITS 286
+ L +NP + Y P +G Y + + + WG + L+A + + I ++ +
Sbjct: 194 DFLPFL-TNPSTGDMYTPEEFGKYCDDIVNTAAWGGQLELRALSHILQTPIEILQA 248
>sp|Q6IE21|OTU6A_MOUSE OTU domain-containing protein 6A OS=Mus musculus GN=Otud6a PE=2
SV=1
Length = 290
Score = 37.7 bits (86), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 34/143 (23%), Positives = 62/143 (43%), Gaps = 18/143 (12%)
Query: 193 LQVYDLVEHKVQGDGNCQFRALSDQI----------YRTAEHHEFVRQQIVAQLK--SNP 240
L +L + DG+C +RA+ DQ+ YRTA ++R+ I L + P
Sbjct: 137 LGAKNLEMKTIPADGHCMYRAIQDQLVFSVTIESLRYRTA---YYMRKHIDDFLPFFTEP 193
Query: 241 DIYEGYVPMAYGDYLEKMSESGEWGDHVTLQAAADLYGVKIFVITSFKDTCYIEILPNVE 300
+ Y + Y + + + WG + L+A + + I V+ + T I
Sbjct: 194 EAGNFYTREDFLRYCDDIVHNASWGGQLELRALSHVLQTPIEVVQANSPTIVIG-EEYTR 252
Query: 301 RSIRVIYLSFWAEV--HYNSIYP 321
+ + ++YL + + HYNS+ P
Sbjct: 253 KPVTLVYLHYACDFGEHYNSVKP 275
>sp|Q8N6M0|OTU6B_HUMAN OTU domain-containing protein 6B OS=Homo sapiens GN=OTUD6B PE=1
SV=1
Length = 293
Score = 37.4 bits (85), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 25/116 (21%), Positives = 54/116 (46%), Gaps = 14/116 (12%)
Query: 184 LDHQRLLERLQVYDLVEHKVQGDGNCQFRALSDQIY-------------RTAEHHEFVRQ 230
++ ++L + L L ++ DG+C ++A+ DQ+ +TAE+ + +
Sbjct: 133 MESEKLAQILAARQLEIKQIPSDGHCMYKAIEDQLKEKDCALTVVALRSQTAEYMQSHVE 192
Query: 231 QIVAQLKSNPDIYEGYVPMAYGDYLEKMSESGEWGDHVTLQAAADLYGVKIFVITS 286
+ L +NP+ + Y P + Y E + + WG + L+A + + I +I +
Sbjct: 193 DFLPFL-TNPNTGDMYTPEEFQKYCEDIVNTAAWGGQLELRALSHILQTPIEIIQA 247
>sp|P21599|KPYK2_ECOLI Pyruvate kinase II OS=Escherichia coli (strain K12) GN=pykA PE=1
SV=3
Length = 480
Score = 35.8 bits (81), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 22/86 (25%), Positives = 40/86 (46%), Gaps = 2/86 (2%)
Query: 73 QLAVSEASESPHETEENLQGPVFQHGWVNHSVGGYYSGQETGQEEADDTQPSSLCSSHEE 132
QL V E TE + GP+ + +N GG + T +++AD + + +
Sbjct: 135 QLKVLEVQGMKVFTEVTVGGPLSNNKGINKLGGGLSAEALTEKDKADIKTAALIGVDYLA 194
Query: 133 VSY--CGEEWSYPQELTDEYALDGEV 156
VS+ CGE+ +Y + L + D ++
Sbjct: 195 VSFPRCGEDLNYARRLARDAGCDAKI 220
>sp|Q91FU0|VF232_IIV6 Putative ubiquitin thioesterase 232R OS=Invertebrate iridescent
virus 6 GN=IIV6-232R PE=3 SV=1
Length = 671
Score = 35.8 bits (81), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 35/157 (22%), Positives = 65/157 (41%), Gaps = 19/157 (12%)
Query: 180 DEATLDHQRLLERLQVYDLVEHK------VQGDGNCQFRALSDQIYRTAEHHEFVRQQIV 233
D L R+ E Q+ L + V DGNC F + + + T+ +RQ V
Sbjct: 368 DLNNLPENRIAELKQLNVLAKQNGFRMINVPLDGNCMFSVIG-RAFNTSS--SVIRQHTV 424
Query: 234 AQLKSNPDIYEGYVP-------MAYGDYLEKMSESGEWGDHVTLQAA--ADLYGVKIFVI 284
L+ ++ ++P + + DY++++ E WGD+ L AA A + I +
Sbjct: 425 DYLRRCKGSFD-HIPANIDDPTINWNDYIDRLEEDACWGDNTALFAASLALNFQAHILQV 483
Query: 285 TSFKDTCYIEILPNVERSIRVIYLSFWAEVHYNSIYP 321
+ +I N R++ + + HY ++ P
Sbjct: 484 AGGDEGSWIRFGVNETNMGRIVNMGYLDNFHYIALEP 520
>sp|Q8ZNW0|KPYK2_SALTY Pyruvate kinase II OS=Salmonella typhimurium (strain LT2 / SGSC1412
/ ATCC 700720) GN=pykA PE=3 SV=3
Length = 480
Score = 35.4 bits (80), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 22/86 (25%), Positives = 40/86 (46%), Gaps = 2/86 (2%)
Query: 73 QLAVSEASESPHETEENLQGPVFQHGWVNHSVGGYYSGQETGQEEADDTQPSSLCSSHEE 132
QL V E TE + GP+ + +N GG + T +++AD + + +
Sbjct: 135 QLKVLEVQGMKVFTEVTVGGPLSNNKGINKLGGGLSAEALTEKDKADIQTAALIGVDYLA 194
Query: 133 VSY--CGEEWSYPQELTDEYALDGEV 156
VS+ CGE+ +Y + L + D ++
Sbjct: 195 VSFPRCGEDLNYARRLARDAGCDAKI 220
>sp|P36999|RLMA_ECOLI 23S rRNA (guanine(745)-N(1))-methyltransferase OS=Escherichia coli
(strain K12) GN=rlmA PE=1 SV=1
Length = 269
Score = 34.7 bits (78), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 41/145 (28%), Positives = 61/145 (42%), Gaps = 24/145 (16%)
Query: 199 VEHKVQGD-GNCQFRALSDQIYRTAEHHEFVRQQIVAQLKSNPD----------IYEGYV 247
V+HK D G+ + + + A H++ +R IVAQL+ D EGY
Sbjct: 40 VQHKRSRDPGDSAEMMQARRAFLDAGHYQPLRDAIVAQLRERLDDKATAVLDIGCGEGYY 99
Query: 248 PMAYGDYLEKMSESGEWGDHVTLQAAADLYGVKIFVITS-----FKDTCYIEILPNVERS 302
A+ D L +++ G V ++AAA Y F + S F DT +++
Sbjct: 100 THAFADALPEITTFGLDVSKVAIKAAAKRYPQVTFCVASSHRLPFSDT-------SMDAI 152
Query: 303 IRVIYLSFWAEVHYNSIYPAGDVPT 327
IR IY AE + P G V T
Sbjct: 153 IR-IYAPCKAEELARVVKPGGWVIT 176
>sp|Q9UUK3|OTU2_SCHPO Ubiquitin thioesterase otu2 OS=Schizosaccharomyces pombe (strain
972 / ATCC 24843) GN=otu2 PE=4 SV=1
Length = 324
Score = 33.5 bits (75), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 29/137 (21%), Positives = 62/137 (45%), Gaps = 17/137 (12%)
Query: 198 LVEHKVQGDGNCQFRALSDQI---YRTAEHHEFVRQQIVAQLKSNPDIYEGYV------- 247
LV + DGNC F ++S Q+ + + + +R + + + + +EG++
Sbjct: 185 LVAVDIPADGNCLFASISHQLNYHHNVKLNSQALRNKSADYVLKHCEQFEGFLLDEESGE 244
Query: 248 PMAYGDYLEKMSESGEWGDHVTLQAAADLYGVKIFVITSFKDTCYIEILPNV---ERSIR 304
+ DY ++ + +WG + +QA A+ V + V + + ++ P+ E+ +
Sbjct: 245 VLPVSDYCNEIRNNSKWGSDIEIQALANSLEVPVHVYNT--EGPVLKFNPSTVKFEKPLC 302
Query: 305 VIYLS--FWAEVHYNSI 319
+ Y F HYNS+
Sbjct: 303 IAYYQHLFGLGAHYNSL 319
>sp|P38747|OTU2_YEAST OTU domain-containing protein 2 OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=OTU2 PE=1 SV=1
Length = 307
Score = 32.7 bits (73), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 31/164 (18%), Positives = 74/164 (45%), Gaps = 21/164 (12%)
Query: 175 EIPSIDEATLDHQRLLERLQVYDLVEHKVQGDGNCQFRALSDQIYRTAEHHEFVRQQIVA 234
++ +++ ++D L++L+ +D +Q DG+C F ++ DQ+ + + + V
Sbjct: 149 DLKKMEQESIDQLCELKKLKQFD-----IQPDGHCLFASILDQLKLRHDPKKLDQDMDVM 203
Query: 235 QLKSNPDIY-----EGYVPMAY----------GDYLEKMSESGEWGDHVTLQAAADLYGV 279
+L+ Y + ++P + +Y ++M + +WG + + A + ++
Sbjct: 204 KLRWLSCNYVQEHRDDFIPYLFDEETMKMKDIDEYTKEMEHTAQWGGEIEILALSHVFDC 263
Query: 280 KIFVITSFKDT-CYIEILPNVERSIRVIYLSFWAEVHYNSIYPA 322
I ++ S + Y E N E + S+ HYNS++ +
Sbjct: 264 PISILMSGRPIQVYNECGKNPELKLVYYKHSYALGEHYNSLHDS 307
>sp|A1IGV8|AAGAR_THASX Alpha-agarase OS=Thalassomonas agarivorans GN=agaA33 PE=1 SV=1
Length = 1463
Score = 32.0 bits (71), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 33/72 (45%), Gaps = 13/72 (18%)
Query: 223 EHHEFVRQQIVAQLKSNPDIYEGYVPMA----------YGDYLEKMSESGEWGDHVTLQA 272
E FV ++ S D EG+ P A YGDY+ E G +G ++T+ A
Sbjct: 704 ELESFVFTSTNGRVGS--DSVEGFSPTATGVNWVTNGDYGDYMVTFEEPGTYGAYITISA 761
Query: 273 AAD-LYGVKIFV 283
A D YG ++ V
Sbjct: 762 ANDGSYGARVDV 773
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.314 0.133 0.403
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 142,711,346
Number of Sequences: 539616
Number of extensions: 6293434
Number of successful extensions: 11642
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 35
Number of HSP's that attempted gapping in prelim test: 11604
Number of HSP's gapped (non-prelim): 58
length of query: 351
length of database: 191,569,459
effective HSP length: 118
effective length of query: 233
effective length of database: 127,894,771
effective search space: 29799481643
effective search space used: 29799481643
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 62 (28.5 bits)