Query 018749
Match_columns 351
No_of_seqs 160 out of 1531
Neff 9.5
Searched_HMMs 46136
Date Fri Mar 29 03:43:08 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/018749.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/018749hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PTZ00343 triose or hexose phos 100.0 4E-36 8.6E-41 277.4 33.1 290 14-308 46-349 (350)
2 TIGR00817 tpt Tpt phosphate/ph 100.0 1.3E-36 2.9E-41 276.6 28.9 286 17-310 2-296 (302)
3 KOG1441 Glucose-6-phosphate/ph 100.0 2.7E-37 5.8E-42 274.3 16.7 309 2-313 2-313 (316)
4 PLN00411 nodulin MtN21 family 100.0 3.2E-31 6.9E-36 243.8 30.6 290 13-310 9-331 (358)
5 KOG1443 Predicted integral mem 100.0 2.6E-30 5.7E-35 221.1 21.7 300 1-305 1-313 (349)
6 PRK11272 putative DMT superfam 100.0 1.7E-26 3.7E-31 209.0 31.8 271 22-308 13-286 (292)
7 PF06027 DUF914: Eukaryotic pr 100.0 8.8E-27 1.9E-31 210.0 28.3 273 30-311 26-309 (334)
8 PRK11689 aromatic amino acid e 100.0 1.2E-26 2.6E-31 210.1 28.5 266 17-308 8-288 (295)
9 PRK15430 putative chlorampheni 100.0 1.1E-26 2.4E-31 210.5 27.9 276 19-311 10-289 (296)
10 PRK11453 O-acetylserine/cystei 100.0 4.9E-26 1.1E-30 206.6 31.7 275 16-310 7-290 (299)
11 PF08449 UAA: UAA transporter 100.0 4.5E-26 9.7E-31 207.1 30.2 273 32-311 15-301 (303)
12 KOG1444 Nucleotide-sugar trans 100.0 1.2E-26 2.6E-31 201.7 24.4 292 15-312 10-305 (314)
13 PRK10532 threonine and homoser 100.0 1.1E-25 2.4E-30 203.6 29.0 268 15-310 14-284 (293)
14 TIGR00950 2A78 Carboxylate/Ami 100.0 8.7E-26 1.9E-30 201.2 27.2 254 32-302 4-259 (260)
15 KOG1442 GDP-fucose transporter 99.9 1.2E-25 2.6E-30 189.5 3.0 298 15-315 26-335 (347)
16 TIGR03340 phn_DUF6 phosphonate 99.9 3E-22 6.4E-27 180.3 24.5 273 23-304 7-280 (281)
17 TIGR00688 rarD rarD protein. T 99.9 5.9E-21 1.3E-25 169.7 25.7 245 21-282 6-255 (256)
18 COG0697 RhaT Permeases of the 99.9 1.6E-19 3.5E-24 163.1 31.3 274 19-308 9-288 (292)
19 COG5070 VRG4 Nucleotide-sugar 99.9 2.9E-21 6.4E-26 158.4 17.1 282 20-311 9-300 (309)
20 COG5006 rhtA Threonine/homoser 99.9 1.1E-19 2.3E-24 152.3 21.0 250 35-307 30-282 (292)
21 KOG1580 UDP-galactose transpor 99.9 3.5E-21 7.6E-26 159.2 11.6 255 45-305 48-311 (337)
22 KOG1581 UDP-galactose transpor 99.8 1.1E-18 2.4E-23 150.1 25.2 277 27-309 24-315 (327)
23 KOG1582 UDP-galactose transpor 99.8 5E-19 1.1E-23 149.4 18.5 280 20-309 46-334 (367)
24 KOG2765 Predicted membrane pro 99.8 9.5E-19 2.1E-23 154.5 20.5 224 88-311 161-394 (416)
25 COG2962 RarD Predicted permeas 99.8 3.7E-17 8E-22 140.8 26.9 275 19-311 9-287 (293)
26 TIGR00776 RhaT RhaT L-rhamnose 99.8 3.2E-17 6.9E-22 147.8 27.3 264 16-307 4-288 (290)
27 KOG1583 UDP-N-acetylglucosamin 99.8 1E-18 2.2E-23 148.1 10.9 256 49-311 32-318 (330)
28 PF04142 Nuc_sug_transp: Nucle 99.8 1.8E-16 3.9E-21 138.5 21.1 209 82-297 14-243 (244)
29 KOG3912 Predicted integral mem 99.8 5.1E-16 1.1E-20 132.0 23.0 283 22-309 8-336 (372)
30 KOG2234 Predicted UDP-galactos 99.7 5.4E-15 1.2E-19 131.1 28.8 281 21-309 19-324 (345)
31 KOG4510 Permease of the drug/m 99.7 1.3E-18 2.7E-23 146.8 3.8 270 23-309 44-327 (346)
32 PF03151 TPT: Triose-phosphate 99.7 9.2E-16 2E-20 125.4 14.8 141 167-307 1-153 (153)
33 KOG2766 Predicted membrane pro 99.6 1.4E-16 3.1E-21 133.6 5.3 255 35-306 36-298 (336)
34 PF00892 EamA: EamA-like trans 99.3 4.6E-12 1E-16 99.4 9.1 122 29-156 3-124 (126)
35 TIGR00803 nst UDP-galactose tr 99.3 1.2E-11 2.7E-16 107.4 12.4 191 110-305 2-222 (222)
36 KOG4314 Predicted carbohydrate 99.3 2E-11 4.4E-16 99.0 8.6 224 81-309 48-278 (290)
37 COG2510 Predicted membrane pro 99.2 8.6E-11 1.9E-15 88.7 10.1 134 19-158 5-139 (140)
38 COG2510 Predicted membrane pro 99.1 5.1E-10 1.1E-14 84.6 10.2 134 168-306 5-138 (140)
39 PF00892 EamA: EamA-like trans 99.1 5.1E-10 1.1E-14 87.7 10.5 125 176-306 1-125 (126)
40 PF06800 Sugar_transport: Suga 99.1 2.4E-08 5.2E-13 87.3 20.7 207 86-304 45-268 (269)
41 PF13536 EmrE: Multidrug resis 99.1 3.5E-10 7.5E-15 87.3 8.1 106 55-162 2-110 (113)
42 TIGR00950 2A78 Carboxylate/Ami 98.8 1.5E-07 3.2E-12 83.7 16.0 130 18-153 129-259 (260)
43 PRK15430 putative chlorampheni 98.8 2.8E-07 6.1E-12 83.6 16.2 138 163-306 5-144 (296)
44 TIGR00688 rarD rarD protein. T 98.8 3.9E-07 8.4E-12 80.9 16.3 136 166-306 2-141 (256)
45 TIGR03340 phn_DUF6 phosphonate 98.7 4.2E-07 9E-12 81.9 14.7 133 168-307 3-135 (281)
46 PRK11272 putative DMT superfam 98.6 2.3E-06 4.9E-11 77.5 14.7 133 21-159 154-286 (292)
47 PLN00411 nodulin MtN21 family 98.5 2.7E-06 5.8E-11 78.9 15.1 137 166-306 13-155 (358)
48 PRK10532 threonine and homoser 98.5 6.1E-06 1.3E-10 74.8 15.5 131 18-157 149-280 (293)
49 PRK15051 4-amino-4-deoxy-L-ara 98.5 3.4E-06 7.5E-11 64.4 11.6 64 94-157 45-108 (111)
50 PRK13499 rhamnose-proton sympo 98.4 0.0002 4.3E-09 65.5 23.8 282 15-307 5-341 (345)
51 PRK02971 4-amino-4-deoxy-L-ara 98.4 2.7E-05 5.8E-10 61.1 14.2 121 166-309 2-124 (129)
52 PF03151 TPT: Triose-phosphate 98.3 3.1E-05 6.8E-10 62.9 15.0 136 21-157 4-152 (153)
53 PTZ00343 triose or hexose phos 98.3 3.1E-05 6.6E-10 72.0 16.1 139 164-307 47-186 (350)
54 TIGR00817 tpt Tpt phosphate/ph 98.2 9.3E-06 2E-10 73.9 10.4 137 18-157 146-292 (302)
55 PRK11689 aromatic amino acid e 98.2 4.6E-05 9.9E-10 69.1 14.7 131 18-158 157-287 (295)
56 PRK11453 O-acetylserine/cystei 98.2 6.5E-05 1.4E-09 68.3 15.6 139 18-158 144-287 (299)
57 PF05653 Mg_trans_NIPA: Magnes 98.2 2.8E-05 6E-10 70.3 12.3 68 91-158 55-122 (300)
58 PF13536 EmrE: Multidrug resis 98.2 3.4E-05 7.4E-10 59.3 10.8 72 238-310 37-109 (113)
59 COG2962 RarD Predicted permeas 98.0 0.00021 4.5E-09 62.6 13.9 138 164-306 5-143 (293)
60 PRK15051 4-amino-4-deoxy-L-ara 98.0 0.0004 8.6E-09 53.1 13.3 57 250-306 52-108 (111)
61 COG4975 GlcU Putative glucose 97.9 5.8E-06 1.3E-10 70.1 2.1 239 50-305 28-283 (288)
62 PRK02971 4-amino-4-deoxy-L-ara 97.9 6.4E-05 1.4E-09 58.9 7.6 72 89-160 51-124 (129)
63 TIGR00776 RhaT RhaT L-rhamnose 97.9 0.00035 7.6E-09 63.2 13.3 128 17-157 152-287 (290)
64 PF08449 UAA: UAA transporter 97.8 0.00047 1E-08 62.8 13.6 129 178-311 12-140 (303)
65 PF06027 DUF914: Eukaryotic pr 97.7 0.001 2.3E-08 60.8 14.4 142 165-309 12-153 (334)
66 PRK10452 multidrug efflux syst 97.7 0.00039 8.4E-09 53.6 9.6 71 89-159 33-104 (120)
67 COG0697 RhaT Permeases of the 97.7 0.0018 3.8E-08 58.1 15.6 133 17-159 154-288 (292)
68 PRK09541 emrE multidrug efflux 97.6 0.00065 1.4E-08 51.6 9.3 70 90-159 34-104 (110)
69 PF04657 DUF606: Protein of un 97.5 0.0059 1.3E-07 48.6 14.1 131 168-304 3-138 (138)
70 PRK11431 multidrug efflux syst 97.5 0.0014 3E-08 49.3 9.6 69 89-157 32-101 (105)
71 COG2076 EmrE Membrane transpor 97.5 0.00093 2E-08 49.8 8.4 70 89-158 33-103 (106)
72 PRK10650 multidrug efflux syst 97.5 0.002 4.4E-08 48.7 10.5 68 89-156 38-106 (109)
73 PF06800 Sugar_transport: Suga 97.4 0.0034 7.3E-08 55.3 12.7 102 47-154 162-267 (269)
74 KOG2922 Uncharacterized conser 97.4 0.00065 1.4E-08 60.3 7.5 69 91-159 69-137 (335)
75 PF04142 Nuc_sug_transp: Nucle 97.2 0.00092 2E-08 58.7 6.6 76 235-310 17-92 (244)
76 PF07857 DUF1632: CEO family ( 97.1 0.0011 2.4E-08 58.0 6.4 132 167-312 1-139 (254)
77 PRK10650 multidrug efflux syst 97.1 0.024 5.2E-07 42.9 12.8 52 255-306 55-107 (109)
78 KOG4510 Permease of the drug/m 97.1 0.00013 2.9E-09 62.8 -0.1 135 165-309 37-171 (346)
79 COG5006 rhtA Threonine/homoser 97.0 0.017 3.6E-07 49.8 12.1 126 21-154 152-278 (292)
80 PRK09541 emrE multidrug efflux 96.9 0.023 4.9E-07 43.2 11.0 54 255-308 50-104 (110)
81 PRK11431 multidrug efflux syst 96.9 0.022 4.7E-07 42.8 10.6 53 254-306 48-101 (105)
82 PRK10452 multidrug efflux syst 96.9 0.0088 1.9E-07 46.1 8.7 55 254-308 49-104 (120)
83 PF04657 DUF606: Protein of un 96.8 0.065 1.4E-06 42.6 13.3 105 49-155 29-138 (138)
84 PF00893 Multi_Drug_Res: Small 96.8 0.011 2.5E-07 43.5 8.3 58 92-149 35-93 (93)
85 COG2076 EmrE Membrane transpor 96.7 0.016 3.5E-07 43.2 8.7 53 255-307 50-103 (106)
86 KOG1441 Glucose-6-phosphate/ph 96.5 0.0068 1.5E-07 54.9 6.2 142 15-157 161-306 (316)
87 TIGR00803 nst UDP-galactose tr 96.5 0.055 1.2E-06 46.8 11.8 67 89-155 155-221 (222)
88 COG3238 Uncharacterized protei 96.4 0.22 4.7E-06 39.8 13.7 137 165-306 4-145 (150)
89 PF05653 Mg_trans_NIPA: Magnes 96.4 0.042 9.1E-07 49.8 10.9 117 163-306 4-121 (300)
90 KOG2234 Predicted UDP-galactos 96.3 0.15 3.2E-06 46.4 13.6 138 169-306 18-163 (345)
91 PF10639 UPF0546: Uncharacteri 96.3 0.01 2.2E-07 45.0 5.2 66 91-156 46-112 (113)
92 PF00893 Multi_Drug_Res: Small 95.3 0.064 1.4E-06 39.4 6.2 46 253-298 47-93 (93)
93 PRK13499 rhamnose-proton sympo 95.3 0.3 6.5E-06 44.9 11.8 138 164-307 5-153 (345)
94 KOG2765 Predicted membrane pro 94.9 0.27 5.8E-06 45.0 9.9 143 15-160 245-392 (416)
95 COG3238 Uncharacterized protei 94.6 1 2.2E-05 36.1 11.5 133 19-156 7-144 (150)
96 KOG1581 UDP-galactose transpor 94.4 0.49 1.1E-05 42.2 10.1 137 15-155 170-310 (327)
97 KOG1580 UDP-galactose transpor 94.1 0.15 3.3E-06 43.5 6.1 63 249-311 99-161 (337)
98 COG5070 VRG4 Nucleotide-sugar 91.8 1.9 4E-05 36.8 9.2 128 20-151 158-289 (309)
99 KOG1444 Nucleotide-sugar trans 91.7 1.2 2.5E-05 40.1 8.5 136 18-156 158-298 (314)
100 PF06379 RhaT: L-rhamnose-prot 91.2 7.6 0.00016 35.5 13.2 138 165-309 6-155 (344)
101 PF10639 UPF0546: Uncharacteri 91.1 0.52 1.1E-05 35.8 4.9 52 253-304 59-111 (113)
102 KOG4314 Predicted carbohydrate 90.7 0.25 5.4E-06 41.1 3.0 64 248-311 66-129 (290)
103 COG4975 GlcU Putative glucose 89.8 0.24 5.2E-06 42.7 2.3 98 54-155 181-282 (288)
104 KOG3912 Predicted integral mem 88.4 12 0.00025 33.3 11.6 68 238-305 89-156 (372)
105 PRK02237 hypothetical protein; 83.0 8.1 0.00018 28.9 6.9 47 263-309 61-107 (109)
106 PF02694 UPF0060: Uncharacteri 81.1 7.4 0.00016 29.0 6.1 47 263-309 59-105 (107)
107 PF10225 DUF2215: Uncharacteri 79.0 41 0.0009 29.6 11.4 43 253-295 113-155 (249)
108 KOG2922 Uncharacterized conser 75.9 0.97 2.1E-05 40.6 0.3 118 162-306 17-135 (335)
109 PF02694 UPF0060: Uncharacteri 75.5 4.5 9.7E-05 30.2 3.6 40 120-159 65-104 (107)
110 PRK02237 hypothetical protein; 74.9 5.1 0.00011 30.0 3.8 40 120-159 67-106 (109)
111 KOG1442 GDP-fucose transporter 74.5 7.6 0.00016 34.4 5.3 120 32-154 200-323 (347)
112 PF04342 DUF486: Protein of un 72.6 4.5 9.7E-05 30.1 3.0 29 276-304 77-105 (108)
113 KOG4831 Unnamed protein [Funct 72.5 4.6 0.0001 30.0 3.0 64 93-156 59-123 (125)
114 PF07168 Ureide_permease: Urei 72.3 4.9 0.00011 36.0 3.8 34 273-307 111-146 (336)
115 COG1742 Uncharacterized conser 71.5 6.3 0.00014 29.2 3.5 40 121-160 67-106 (109)
116 COG3169 Uncharacterized protei 70.5 12 0.00025 27.5 4.6 39 267-305 71-113 (116)
117 KOG1583 UDP-N-acetylglucosamin 70.3 14 0.00031 32.7 6.0 141 11-157 158-313 (330)
118 PF04342 DUF486: Protein of un 68.2 48 0.001 24.8 9.2 33 124-156 74-106 (108)
119 COG3274 Predicted O-acyltransf 67.3 39 0.00084 30.8 8.3 148 2-155 67-217 (332)
120 TIGR00892 2A0113 monocarboxyla 60.8 1.6E+02 0.0034 28.2 13.2 15 289-303 401-415 (455)
121 PF05297 Herpes_LMP1: Herpesvi 58.4 3.2 7E-05 36.6 0.0 67 107-173 44-114 (381)
122 PF08507 COPI_assoc: COPI asso 48.7 24 0.00051 27.8 3.5 29 276-305 75-103 (136)
123 PF11044 TMEMspv1-c74-12: Plec 48.5 46 0.001 20.4 3.8 16 288-303 3-18 (49)
124 COG1742 Uncharacterized conser 48.4 19 0.00042 26.7 2.7 46 264-309 61-106 (109)
125 KOG4812 Golgi-associated prote 46.5 74 0.0016 27.6 6.2 20 287-306 219-238 (262)
126 PF05977 MFS_3: Transmembrane 44.1 3.3E+02 0.0072 26.9 18.4 26 257-282 342-367 (524)
127 PF09656 PGPGW: Putative trans 43.9 85 0.0018 20.3 4.8 45 141-190 4-48 (53)
128 PF06379 RhaT: L-rhamnose-prot 42.0 2.9E+02 0.0062 25.6 23.0 165 15-186 5-193 (344)
129 COG3169 Uncharacterized protei 38.5 1.6E+02 0.0035 21.7 9.8 30 127-156 84-113 (116)
130 TIGR02865 spore_II_E stage II 36.8 5.1E+02 0.011 27.0 14.1 44 113-156 11-54 (764)
131 COG4858 Uncharacterized membra 36.4 2.3E+02 0.0049 23.7 7.3 22 19-40 102-123 (226)
132 PRK06638 NADH:ubiquinone oxido 36.3 2.6E+02 0.0057 23.5 11.4 23 277-299 134-156 (198)
133 KOG3762 Predicted transporter 35.6 50 0.0011 32.6 4.1 13 288-300 527-539 (618)
134 PF08627 CRT-like: CRT-like; 33.5 1.2E+02 0.0025 23.6 4.9 42 13-58 53-95 (130)
135 KOG1582 UDP-galactose transpor 32.4 2E+02 0.0044 25.7 6.8 52 109-160 283-334 (367)
136 PF00909 Ammonium_transp: Ammo 29.8 4.9E+02 0.011 24.6 15.9 25 164-188 274-299 (399)
137 PRK13108 prolipoprotein diacyl 27.0 78 0.0017 30.6 3.8 23 287-309 254-276 (460)
138 PF13038 DUF3899: Domain of un 25.9 66 0.0014 23.2 2.5 19 288-306 3-21 (92)
139 PF13937 DUF4212: Domain of un 25.5 2.5E+02 0.0055 19.9 7.9 46 9-54 5-51 (81)
140 PF15345 TMEM51: Transmembrane 25.0 76 0.0016 27.4 2.9 19 293-311 67-85 (233)
141 PF08229 SHR3_chaperone: ER me 24.5 80 0.0017 26.6 3.0 14 144-157 13-26 (196)
142 KOG1443 Predicted integral mem 24.3 5.6E+02 0.012 23.5 11.7 53 104-156 261-313 (349)
143 PF10754 DUF2569: Protein of u 23.7 3.8E+02 0.0082 21.3 7.8 25 164-188 119-143 (149)
144 PF07857 DUF1632: CEO family ( 23.0 5.3E+02 0.012 22.8 13.3 101 50-158 27-134 (254)
145 PF09930 DUF2162: Predicted tr 22.9 5E+02 0.011 22.5 13.3 78 77-154 93-173 (224)
146 PF09586 YfhO: Bacterial membr 22.6 9.1E+02 0.02 25.3 14.4 77 51-139 93-169 (843)
147 COG4327 Predicted membrane pro 21.7 1.6E+02 0.0036 21.4 3.6 43 11-53 14-56 (101)
148 COG5336 Uncharacterized protei 21.5 2E+02 0.0044 21.7 4.2 35 272-306 56-91 (116)
149 PRK10263 DNA translocase FtsK; 21.4 1.2E+03 0.026 26.2 12.7 22 240-261 142-163 (1355)
150 PRK10666 ammonium transporter; 21.1 7.5E+02 0.016 23.8 15.6 52 134-187 274-326 (428)
151 PF09852 DUF2079: Predicted me 21.0 7.5E+02 0.016 23.8 10.0 51 47-104 56-106 (449)
152 PF11118 DUF2627: Protein of u 20.7 3.1E+02 0.0067 19.2 6.8 48 13-64 2-49 (77)
153 PRK09412 anaerobic C4-dicarbox 20.2 7.8E+02 0.017 23.6 11.8 12 127-138 8-19 (433)
154 COG1971 Predicted membrane pro 20.1 1.3E+02 0.0029 25.1 3.4 44 261-304 40-84 (190)
No 1
>PTZ00343 triose or hexose phosphate/phosphate translocator; Provisional
Probab=100.00 E-value=4e-36 Score=277.35 Aligned_cols=290 Identities=18% Similarity=0.204 Sum_probs=244.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhcccccccccHHHHHHHHHHHHHHHHHHHHHHhcccCCCCCC-hhhHhHHHHHH
Q 018749 14 KILLSYTYVAIWIFLSFTVIVYNKYILDKKMYNWPFPISLTMIHMSFCATLAFLLIKVFKFVEPVTMS-RDLYFSSVVPI 92 (351)
Q Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~K~~l~~~~~~~~~p~~~~~~r~~~~~~~l~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 92 (351)
..++...++..|+.+|+...+.||++++ .+|+|+.++.+|++++.+.+.+++. .+.+++++.+ +++.++..++.
T Consensus 46 ~~~~~~~~~~~wy~~s~~~~~~nK~vl~----~~~~P~~l~~~~~~~~~l~~~~~~~-~~~~~~~~~~~~~~~~~~llp~ 120 (350)
T PTZ00343 46 FKWKLALLFLTWYALNVLYVVDNKLALN----MLPLPWTISSLQLFVGWLFALLYWA-TGFRKIPRIKSLKLFLKNFLPQ 120 (350)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHHHH----hCChhHHHHHHHHHHHHHHHHHHHH-hCCCCCCCCCCHHHHHHHHHHH
Confidence 3678899999999999999999999994 7889999999999999887666554 3333334443 44456889999
Q ss_pred HHHHHHHHhhhhhhcccccHHHHHHHHHHHHHHHHHHHHHhccccccchhhHHHHHHHhhhheeeecCcccchhHHHHHH
Q 018749 93 GALYSLSLWLSNSAYIYLSVSFIQMLKALMPVAVYSIGVTFKKESFKSDTMCNMVSISVGVAIAAYGEAKFDSWGVVLQL 172 (351)
Q Consensus 93 ~l~~~~~~~~~~~al~~~~~s~~~vi~~~~pi~~~ll~~~~~~e~~~~~~~~~~~l~~~Gv~l~~~~~~~~~~~G~~~~l 172 (351)
|+++...+...+.|+++++++.+++++++.|+++++++++++|||++++++.+++++++|+.+...++.++++.|+++++
T Consensus 121 gl~~~~~~~~~~~sl~~~svs~~~iika~~Pvft~lls~~~l~ek~s~~~~l~l~l~v~Gv~l~~~~~~~~~~~G~~~~l 200 (350)
T PTZ00343 121 GLCHLFVHFGAVISMGLGAVSFTHVVKAAEPVFTALLSILFLKQFLNLYAYLSLIPIVGGVALASVKELHFTWLAFWCAM 200 (350)
T ss_pred HHHHHHHHHHHHHHHhhccHHHHHHHHHhhHHHHHHHHHHHhCCCccHHHHHHHHHHHHHHHheecccchhHHHHHHHHH
Confidence 99987777778899999999999999999999999999999999999999999999999999999888888899999999
Q ss_pred HHHHHHHHHHHHHHHHhhcCC---CCCChHHHHHHHhHHHHHHHHHHHHHhhchhhhh--------cCCC--cchhHHHH
Q 018749 173 GAVAFEATRLVMIQILLTSKG---ITLNPITSLYYVAPCCLVFLLVPWIFVELPILRE--------TSSF--HFDFVIFG 239 (351)
Q Consensus 173 ~s~~~~a~~~v~~~~~~~~~~---~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~--------~~~~--~~~~~~~~ 239 (351)
+|++++|+++++.||.+++.+ .+.++.+...+..+.+.+..+|.....|.+.... ...+ ...+..++
T Consensus 201 ~s~~~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lp~~~~~e~~~~~~~~~~~~~~~~~~~~~~~l~~i~ 280 (350)
T PTZ00343 201 LSNLGSSLRSIFAKKTMKNKSEIGENLTASNIYMLLTLIASLISLPLVLFFEGKKWVPVWTNYTANMTNYTKGIIIFKIF 280 (350)
T ss_pred HHHHHHHHHHHHHHHHhcccccccccCCHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHhhhcccccchHHHHHHHH
Confidence 999999999999999987532 1456777777778888888887766555432110 0111 12234566
Q ss_pred HHHHHHHHHHHHHHHHHhcchhHHHHHHhhhhhHHHhhhhHhhcCCccchhhHHHHHHHHHhHhhhhhh
Q 018749 240 TNSLCAFALNLAVFLLVGKTSALTMNVAGVVKDWLLIAFSWSVIKDTVTPINLFGYGLAFLGVAYYNHS 308 (351)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~l~~v~~~~~~~~~~~e~~s~~~~~G~~li~~g~~l~~~~ 308 (351)
.+++..+++|.+.+.++++++|.++++.++++|++++++|++++||++|+.+++|.++++.|+++|+..
T Consensus 281 ~s~l~~~l~n~~~f~~l~~~s~~t~sv~~~lk~V~~iv~s~l~~ge~lt~~~~iG~~lii~Gv~lYs~~ 349 (350)
T PTZ00343 281 FSGVWYYLYNEVAFYCLGKVNQVTHAVANTLKRVVIIVSSIIIFQTQVTLLGYLGMAVAILGALLYSLF 349 (350)
T ss_pred HHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHhhhhHHHhCCCCchHhHHHHHHHHHHHHHHhhc
Confidence 778888888888999999999999999999999999999999999999999999999999999999864
No 2
>TIGR00817 tpt Tpt phosphate/phosphoenolpyruvate translocator. specificities overlap.
Probab=100.00 E-value=1.3e-36 Score=276.55 Aligned_cols=286 Identities=22% Similarity=0.324 Sum_probs=236.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhcccccccccHHHHHHHHHHHHHHHHHHHHHHhcccCCCCCChhhHhHHHHHHHHHH
Q 018749 17 LSYTYVAIWIFLSFTVIVYNKYILDKKMYNWPFPISLTMIHMSFCATLAFLLIKVFKFVEPVTMSRDLYFSSVVPIGALY 96 (351)
Q Consensus 17 ~~~~~~~~~~~~~~~~~~~~K~~l~~~~~~~~~p~~~~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 96 (351)
+...++.+|+..|++.++.||++++ ++++|..++++|++++.+.+.+.+. .+.+++.+.++++ ++..++.|+++
T Consensus 2 ~~~~~~~~w~~~~~~~~~~NK~~l~----~~~~P~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~-~~~~~~~g~~~ 75 (302)
T TIGR00817 2 QTGLLFGLWYFLNVYFNIYNKKLLN----VFPYPYFKTLISLAVGSLYCLLSWS-SGLPKRLKISSAL-LKLLLPVAIVH 75 (302)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHh----hCChhHHHHHHHHHHHHHHHHHHHH-hCCCCCCCCCHHH-HHHHHHHHHHH
Confidence 4567889999999999999999994 6888999999999998877666532 3334455667776 57788999999
Q ss_pred HHHHhhhhhhcccccHHHHHHHHHHHHHHHHHHHHHhccccccchhhHHHHHHHhhhheeeecCcccchhHHHHHHHHHH
Q 018749 97 SLSLWLSNSAYIYLSVSFIQMLKALMPVAVYSIGVTFKKESFKSDTMCNMVSISVGVAIAAYGEAKFDSWGVVLQLGAVA 176 (351)
Q Consensus 97 ~~~~~~~~~al~~~~~s~~~vi~~~~pi~~~ll~~~~~~e~~~~~~~~~~~l~~~Gv~l~~~~~~~~~~~G~~~~l~s~~ 176 (351)
+....+.|.+++|++++.+++++++.|+++++++++++|||++++++.+++++++|+.+...++.+.+..|+++++++++
T Consensus 76 ~~~~~~~~~~l~~~s~s~~~li~~~~Pv~~~ll~~~~~~e~~~~~~~~~l~l~~~Gv~l~~~~~~~~~~~G~~~~l~a~~ 155 (302)
T TIGR00817 76 TIGHVTSNVSLSKVAVSFTHTIKAMEPFFSVVLSAFFLGQEFPSTLWLSLLPIVGGVALASDTELSFNWAGFLSAMISNI 155 (302)
T ss_pred HHHHHHHHHHHHhccHHHHHHHHhcchHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHhhhcCCcccccHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999998776666777889999999999
Q ss_pred HHHHHHHHHHHHhhcCCCCCChHHHHHHHhHHHHHHHHHHHHHhhchhhhh--cCC----Cc--chhHHHHHHHH-HHHH
Q 018749 177 FEATRLVMIQILLTSKGITLNPITSLYYVAPCCLVFLLVPWIFVELPILRE--TSS----FH--FDFVIFGTNSL-CAFA 247 (351)
Q Consensus 177 ~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~--~~~----~~--~~~~~~~~~~~-~~~~ 247 (351)
+|++|.++.||.+++ .+.|+.+...|+...+.+.++|.....|.+.... ... +. ..+...+..+. ....
T Consensus 156 ~~a~~~v~~k~~~~~--~~~~~~~~~~~~~~~~~~~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (302)
T TIGR00817 156 TFVSRNIFSKKAMTI--KSLDKTNLYAYISIMSLFLLSPPAFITEGPPFLPHGFMQAISGVNVTKIYTVSLVAAMGFFHF 233 (302)
T ss_pred HHHHHHHHHHHhhcc--CCCCcccHHHHHHHHHHHHHHHHHHHHcchHHHHHHHHHhhcccCchHHHHHHHHHHHHHHHH
Confidence 999999999998653 2568899999999999888887766555322111 000 11 11222223332 4444
Q ss_pred HHHHHHHHHhcchhHHHHHHhhhhhHHHhhhhHhhcCCccchhhHHHHHHHHHhHhhhhhhhh
Q 018749 248 LNLAVFLLVGKTSALTMNVAGVVKDWLLIAFSWSVIKDTVTPINLFGYGLAFLGVAYYNHSKL 310 (351)
Q Consensus 248 ~~~~~~~~~~~~~~~~~s~~~~l~~v~~~~~~~~~~~e~~s~~~~~G~~li~~g~~l~~~~~~ 310 (351)
++...+.++++++|+++++..+++|++++++|++++||++|+.+++|+.+++.|+.+|++.|.
T Consensus 234 ~~~~~~~~l~~~sa~t~sv~~~l~pv~~~~~~~~~lge~lt~~~~~G~~lil~Gv~l~~~~k~ 296 (302)
T TIGR00817 234 YQQVAFMLLGRVSPLTHSVGNCMKRVVVIVVSILFFGTKISPQQVFGTGIAIAGVFLYSRVKA 296 (302)
T ss_pred HHHHHHHHHccCCchHHHHHhhhhhhheeeeehhhcCCCCchhHHHHHHHHHHHHHHHHHHhc
Confidence 556777899999999999999999999999999999999999999999999999999987654
No 3
>KOG1441 consensus Glucose-6-phosphate/phosphate and phosphoenolpyruvate/phosphate antiporter [Carbohydrate transport and metabolism; Amino acid transport and metabolism]
Probab=100.00 E-value=2.7e-37 Score=274.34 Aligned_cols=309 Identities=39% Similarity=0.610 Sum_probs=267.8
Q ss_pred CCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccccccHHHHHHHHHHHHHHHHHHHHHHhcccCCCCCC
Q 018749 2 GKGGSLSDGVIKKILLSYTYVAIWIFLSFTVIVYNKYILDKKMYNWPFPISLTMIHMSFCATLAFLLIKVFKFVEPVTMS 81 (351)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~K~~l~~~~~~~~~p~~~~~~r~~~~~~~l~~~~~~~~~~~~~~~~ 81 (351)
+++....+...++......++..|++++++....||++++ .++|++|++++..++..+.+..... +..+..++.+.+
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~w~~~~v~~~~~nK~il~--~~~f~~p~~lt~~~~~~~~l~~~v~-~~l~~~~~~~~~ 78 (316)
T KOG1441|consen 2 VKSSEPASGQLKKILRIGIAFAIWYVLSVGVIILNKYILS--KYGFPFPITLTMLHLFCGALALLVI-KVLKLVPPSKIS 78 (316)
T ss_pred CcCccCcccccchhHHHHHHHHHHhhhheeeEEeeHhhhc--cCCCCCccHHHHHHHHHHHHHHHHH-HHhcCCCCCccc
Confidence 3444444445578889999999999999999999999996 3699999999999887776665555 447777777776
Q ss_pred hhhHhHHHHHHHHHHHHHHhhhhhhcccccHHHHHHHHHHHHHHHHHHHHHhccccccchhhHHHHHHHhhhheeeecCc
Q 018749 82 RDLYFSSVVPIGALYSLSLWLSNSAYIYLSVSFIQMLKALMPVAVYSIGVTFKKESFKSDTMCNMVSISVGVAIAAYGEA 161 (351)
Q Consensus 82 ~~~~~~~~~~~~l~~~~~~~~~~~al~~~~~s~~~vi~~~~pi~~~ll~~~~~~e~~~~~~~~~~~l~~~Gv~l~~~~~~ 161 (351)
.+..++..++.++.++++.++.|.|+.|+|++.++++|+++|+++.++++++.+|++++..+++++..+.|+.+.+..|.
T Consensus 79 ~~~~~~~llpl~~~~~~~~v~~n~Sl~~v~VsF~q~iKa~~P~~tvl~~~~~~~~~~s~~~~lsL~piv~GV~ias~~e~ 158 (316)
T KOG1441|consen 79 SKLPLRTLLPLGLVFCISHVLGNVSLSYVPVSFYQTIKALMPPFTVLLSVLLLGKTYSSMTYLSLLPIVFGVAIASVTEL 158 (316)
T ss_pred cccchHHHHHHHHHHHHHHHhcchhhhccchhHHHHHHhhcchhHHHHHHHHhCCCCcceEEEEEEEeeeeEEEeeeccc
Confidence 66668999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccchhHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCChHHHHHHHhHHHHHHHHHH-HHHhhchhh--hhcCCCcchhHHH
Q 018749 162 KFDSWGVVLQLGAVAFEATRLVMIQILLTSKGITLNPITSLYYVAPCCLVFLLVP-WIFVELPIL--RETSSFHFDFVIF 238 (351)
Q Consensus 162 ~~~~~G~~~~l~s~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~-~~~~~~~~~--~~~~~~~~~~~~~ 238 (351)
++|+.|.+.++++.+..++++++.|+++++++++.|+++.++|+.+++.+.+++| ....|++.. .....|.......
T Consensus 159 ~fn~~G~i~a~~s~~~~al~~I~~~~ll~~~~~~~~~~~ll~y~ap~s~~~Ll~P~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (316)
T KOG1441|consen 159 SFNLFGFISAMISNLAFALRNILSKKLLTSKGESLNSMNLLYYTAPISLIFLLIPFLDYVEGNKFVGFLTAPWFVTFLIL 238 (316)
T ss_pred cccHHHHHHHHHHHHHHHHHHHHHHHhhhccccccCchHHHHHhhhHHHHHHhcchHhhhcccceeeeeccccchhhHHH
Confidence 9999999999999999999999999999876778999999999999999999844 444444332 0222344334444
Q ss_pred HHHHHHHHHHHHHHHHHHhcchhHHHHHHhhhhhHHHhhhhHhhcCCccchhhHHHHHHHHHhHhhhhhhhhhhh
Q 018749 239 GTNSLCAFALNLAVFLLVGKTSALTMNVAGVVKDWLLIAFSWSVIKDTVTPINLFGYGLAFLGVAYYNHSKLQAL 313 (351)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~l~~v~~~~~~~~~~~e~~s~~~~~G~~li~~g~~l~~~~~~~~~ 313 (351)
....++++.+|.+.|.++++++|+++++.+.+|.++.+..|+++|++++|+.+.+|+++.+.|+.+|++.+.+++
T Consensus 239 ~~~sv~~f~~Nls~f~~ig~tSalT~~V~g~~K~~~vi~~s~~iF~~pvt~~n~~G~~iai~Gv~~Y~~~k~~~~ 313 (316)
T KOG1441|consen 239 LLNSVLAFLLNLSAFLVIGRTSALTYSVAGHMKRIVVIVVSWLIFGNPVTFLNALGYAIAILGVFLYSRAKLKEK 313 (316)
T ss_pred HHHHHHHHHHHHHHHHHHcccCchhhhhhccceEEEEEEeEeeeecCCCchhhHHHHHHHHHHHHHHHHHhhhhh
Confidence 444599999999999999999999999999999999999999999999999999999999999999998876543
No 4
>PLN00411 nodulin MtN21 family protein; Provisional
Probab=100.00 E-value=3.2e-31 Score=243.75 Aligned_cols=290 Identities=11% Similarity=0.052 Sum_probs=215.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccccccHHHHHHHHHHHHHHHHHHHHHHhcc-cCCCCCChhhHhHHHHH
Q 018749 13 KKILLSYTYVAIWIFLSFTVIVYNKYILDKKMYNWPFPISLTMIHMSFCATLAFLLIKVFKF-VEPVTMSRDLYFSSVVP 91 (351)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~K~~l~~~~~~~~~p~~~~~~r~~~~~~~l~~~~~~~~~-~~~~~~~~~~~~~~~~~ 91 (351)
+|..+.+..++.--..+.++..+.|..++ .+++ |..+.++|+.+++++++++.+..++ +++++.+++++.+ ...
T Consensus 9 ~~~~~~~~~~~~~q~~~~~~~~~~k~a~~---~G~~-~~~~~~~R~~iA~l~Ll~~~~~~~~~~~~~~~~~~~~~~-l~l 83 (358)
T PLN00411 9 RREAVFLTAMLATETSVVGISTLFKVATS---KGLN-IYPFLGYSYLLASLLLLPSLFFTNRSRSLPPLSVSILSK-IGL 83 (358)
T ss_pred hhccchHHHHHHHHHHHHHHHHHHHHHHH---CCCC-ccHHHHHHHHHHHHHHHHHHHHHHHhcccCcchHHHHHH-HHH
Confidence 33555666667777778888899999996 7888 9999999999999888877654332 2233345665433 444
Q ss_pred HHHHHHHHHhhhhhhcccccHHHHHHHHHHHHHHHHHHHHHh------ccccccchhhHHHHHHHhhhheeeec-Cc---
Q 018749 92 IGALYSLSLWLSNSAYIYLSVSFIQMLKALMPVAVYSIGVTF------KKESFKSDTMCNMVSISVGVAIAAYG-EA--- 161 (351)
Q Consensus 92 ~~l~~~~~~~~~~~al~~~~~s~~~vi~~~~pi~~~ll~~~~------~~e~~~~~~~~~~~l~~~Gv~l~~~~-~~--- 161 (351)
.+++.+....+.+.|++|++++.++++.++.|+++++++.++ +|||+++++++|++++++|+.++... +.
T Consensus 84 ~g~~g~~~~~~~~~gl~~tsa~~asll~~~~P~~~~lla~~~~~e~~~~~er~~~~~~~G~~l~~~Gv~ll~~~~g~~~~ 163 (358)
T PLN00411 84 LGFLGSMYVITGYIGIEYSNPTLASAISNITPALTFILAIIFRMEKVSFKERSSVAKVMGTILSLIGALVVIFYHGPRVF 163 (358)
T ss_pred HHHHHHHHHHHHHHHHhhccHHHHHHHHHhhHHHHHHHHHHHHhchhhhcccccHHHHHHHHHHHHHHHHHHHccCcccc
Confidence 555445666789999999999999999999999999999999 69999999999999999999875531 11
Q ss_pred --------------------ccc-hhHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCChHHHHHHHhHHHHHHHHHHHHHh
Q 018749 162 --------------------KFD-SWGVVLQLGAVAFEATRLVMIQILLTSKGITLNPITSLYYVAPCCLVFLLVPWIFV 220 (351)
Q Consensus 162 --------------------~~~-~~G~~~~l~s~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 220 (351)
..+ ..|.+++++++++||+|++++|+..++.+ +......++..++.+...++....
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~lG~~l~l~aa~~wa~~~il~~~~~~~~~---~~~~~t~~~~~~~~~~~~~~~l~~ 240 (358)
T PLN00411 164 VASSPPYLNFRQLSPPLSSSNSDWLIGGALLTIQGIFVSVSFILQAHIMSEYP---AAFTVSFLYTVCVSIVTSMIGLVV 240 (358)
T ss_pred cccccccccccccccccCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC---cHhHHHHHHHHHHHHHHHHHHHHH
Confidence 112 45999999999999999999999877421 223444555555555555555444
Q ss_pred hchhhh-hcCCCcchhHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHhhhhhHHHhhhhHhhcCCccchhhHHHHHHHH
Q 018749 221 ELPILR-ETSSFHFDFVIFGTNSLCAFALNLAVFLLVGKTSALTMNVAGVVKDWLLIAFSWSVIKDTVTPINLFGYGLAF 299 (351)
Q Consensus 221 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~l~~v~~~~~~~~~~~e~~s~~~~~G~~li~ 299 (351)
|..... +...+......++..++...+.+..+++++++.+|.+++++.+++|++++++|++++||++++.+++|+++++
T Consensus 241 ~~~~~~~~~~~~~~~~~~i~y~~i~t~lay~lw~~~v~~~ga~~as~~~~L~PV~a~llg~l~LgE~lt~~~~iG~~LIl 320 (358)
T PLN00411 241 EKNNPSVWIIHFDITLITIVTMAIITSVYYVIHSWTVRHKGPLYLAIFKPLSILIAVVMGAIFLNDSLYLGCLIGGILIT 320 (358)
T ss_pred ccCCcccceeccchHHHHHHHHHHHHHHHHHHHHHHHhccCchHHHHHHhHHHHHHHHHHHHHhCCCCcHHHHHHHHHHH
Confidence 432111 1112222222233333444455667788999999999999999999999999999999999999999999999
Q ss_pred HhHhhhhhhhh
Q 018749 300 LGVAYYNHSKL 310 (351)
Q Consensus 300 ~g~~l~~~~~~ 310 (351)
.|+++..+.++
T Consensus 321 ~Gv~l~~~~~~ 331 (358)
T PLN00411 321 LGFYAVMWGKA 331 (358)
T ss_pred HHHHHHHhhhh
Confidence 99999776443
No 5
>KOG1443 consensus Predicted integral membrane protein [Function unknown]
Probab=99.97 E-value=2.6e-30 Score=221.12 Aligned_cols=300 Identities=25% Similarity=0.385 Sum_probs=261.2
Q ss_pred CCCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccccccHHHHHHHHHHHHHHHHHHHHHHhcccC---C
Q 018749 1 MGKGGSLSDGVIKKILLSYTYVAIWIFLSFTVIVYNKYILDKKMYNWPFPISLTMIHMSFCATLAFLLIKVFKFVE---P 77 (351)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~K~~l~~~~~~~~~p~~~~~~r~~~~~~~l~~~~~~~~~~~---~ 77 (351)
||+-+..++..++ .+..+.++..|+++|++.++.+|..- .+|++|.+++..|+++-.+......+..+.+. +
T Consensus 1 ~~~~~~~~~~~~~-rV~~L~lVl~yY~~Si~Ltf~~~~~~----~~f~fPLf~ts~h~~v~flfa~~~~~l~~~~~~r~r 75 (349)
T KOG1443|consen 1 MGRWALDNQFLMN-RVLTLALVLLYYFLSIGLTFYFKWLT----KNFHFPLFVTSLHLAVKFLFAALSRRLYQCSVPRAR 75 (349)
T ss_pred CCccccchHHHHH-HHHHHHHHHHHHHHHHHHHHHhhhhh----cCcCCchHHHHHHHHHHHHHHHHHHHHHhccCCccc
Confidence 5667776666544 45555566999999999988888887 57999999999999988777666655444332 4
Q ss_pred CCCChhhHhHHHHHHHHHHHHHHhhhhhhcccccHHHHHHHHHHHHHHHHHHHHHhccccccchhhHHHHHHHhhhheee
Q 018749 78 VTMSRDLYFSSVVPIGALYSLSLWLSNSAYIYLSVSFIQMLKALMPVAVYSIGVTFKKESFKSDTMCNMVSISVGVAIAA 157 (351)
Q Consensus 78 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~al~~~~~s~~~vi~~~~pi~~~ll~~~~~~e~~~~~~~~~~~l~~~Gv~l~~ 157 (351)
...+|++..|...|.++.-+....+.|++++|++++.+++.|+++++|+.+++.++.-||+++.-.+.+.++.+|+.+..
T Consensus 76 ~~~sw~~~Lr~~aPtalata~DIGLSN~sl~yVtlSlYTM~KSSsi~FIllFs~if~lEk~~w~L~l~v~lI~~Glflft 155 (349)
T KOG1443|consen 76 VVLSWRDYLRRLAPTALATALDIGLSNWSLEYVTLSLYTMTKSSSILFILLFSLIFKLEKFRWALVLIVLLIAVGLFLFT 155 (349)
T ss_pred cCCcHHHHHHHhhhhhhhhhcccccccceeeeeeeeeeeeccccHHHHHHHHHHHHHhHHHHHHHHHHHHHHhhheeEEE
Confidence 56889999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ecCcccchhHHHHHHHHHHHHHHHHHHHHHHhhcCC-CCCChHHHHHHHhHHHHHHHHHHHHHhhchhhhhcC-------
Q 018749 158 YGEAKFDSWGVVLQLGAVAFEATRLVMIQILLTSKG-ITLNPITSLYYVAPCCLVFLLVPWIFVELPILRETS------- 229 (351)
Q Consensus 158 ~~~~~~~~~G~~~~l~s~~~~a~~~v~~~~~~~~~~-~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~------- 229 (351)
.++.+++..|..+...++++.+++..+.+.++++++ .+-+|....++..+...+.+++..+.+|++......
T Consensus 156 ~KsTqf~i~Gf~lv~~aS~~sGlRW~~tQ~ll~~~~~~~~~P~~ti~~l~p~M~~~Ll~~~l~fEG~~~~~~s~~f~~~d 235 (349)
T KOG1443|consen 156 YKSTQFNIEGFFLVLAASLLSGLRWAFTQMLLRNQPSAKRNPIDTIFHLQPWMSIGLLPLSLLFEGLHLITSSSIFRFQD 235 (349)
T ss_pred ecccceeehhHHHHHHHHHhhhhhHHHHHHHHhcCccccCCCeeeHHHhhhHHHHHHHHHHHHHcccccchhhhHHHhcC
Confidence 999999999999999999999999999999999866 566899999999999999888888888876543211
Q ss_pred C--CcchhHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHhhhhhHHHhhhhHhhcCCccchhhHHHHHHHHHhHhhh
Q 018749 230 S--FHFDFVIFGTNSLCAFALNLAVFLLVGKTSALTMNVAGVVKDWLLIAFSWSVIKDTVTPINLFGYGLAFLGVAYY 305 (351)
Q Consensus 230 ~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~l~~v~~~~~~~~~~~e~~s~~~~~G~~li~~g~~l~ 305 (351)
. .......+.+++..+++...+-+.++.+++..+.++.+..+.+.+.+++..+.+|++|..+|.|..+++.|+.++
T Consensus 236 ~~~~~rv~g~i~l~g~laF~l~~sEflLl~~Ts~ltlSIaGI~Kel~tl~la~ii~~d~ls~lN~~Gl~i~~agi~~~ 313 (349)
T KOG1443|consen 236 TGLILRVIGLISLGGLLAFLLEFSEFLLLSRTSSLTLSIAGIVKEVCTLLLAIIILKDQLSLLNWLGLAICLAGILLH 313 (349)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHHheeeeccceeeeHHHHHHHHHHHHHHHHHhhcchhhhHHHHHHHHHHHHHHh
Confidence 1 112245678889999999999999999999999999999999999999999999999999999999999999998
No 6
>PRK11272 putative DMT superfamily transporter inner membrane protein; Provisional
Probab=99.96 E-value=1.7e-26 Score=208.97 Aligned_cols=271 Identities=12% Similarity=0.079 Sum_probs=199.8
Q ss_pred HHHHHHHHHHHHHHHHHhhcccccccccHHHHHHHHHHHHHHHHHHHHHHhcccCCCCCChhhHhHHHHHHHHH-HHHHH
Q 018749 22 VAIWIFLSFTVIVYNKYILDKKMYNWPFPISLTMIHMSFCATLAFLLIKVFKFVEPVTMSRDLYFSSVVPIGAL-YSLSL 100 (351)
Q Consensus 22 ~~~~~~~~~~~~~~~K~~l~~~~~~~~~p~~~~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~~~~ 100 (351)
.+.-.+.+++.....|... .+.+ |..++++|+.++.++++++.+..+. +..+++++ +.....+.+ ....+
T Consensus 13 ~~~~~~iWg~~~~~~K~~~----~~~~-p~~~~~~R~~~a~l~ll~~~~~~~~---~~~~~~~~-~~~~~~g~~~~~~~~ 83 (292)
T PRK11272 13 LFALYIIWGSTYLVIRIGV----ESWP-PLMMAGVRFLIAGILLLAFLLLRGH---PLPTLRQW-LNAALIGLLLLAVGN 83 (292)
T ss_pred HHHHHHHHhhHHHHHHHHh----ccCC-HHHHHHHHHHHHHHHHHHHHHHhCC---CCCcHHHH-HHHHHHHHHHHHHHH
Confidence 3344444455666779988 4788 9999999999998887777653221 12234443 334445544 46677
Q ss_pred hhhhhhc-ccccHHHHHHHHHHHHHHHHHHHHHhccccccchhhHHHHHHHhhhheeeec-CcccchhHHHHHHHHHHHH
Q 018749 101 WLSNSAY-IYLSVSFIQMLKALMPVAVYSIGVTFKKESFKSDTMCNMVSISVGVAIAAYG-EAKFDSWGVVLQLGAVAFE 178 (351)
Q Consensus 101 ~~~~~al-~~~~~s~~~vi~~~~pi~~~ll~~~~~~e~~~~~~~~~~~l~~~Gv~l~~~~-~~~~~~~G~~~~l~s~~~~ 178 (351)
.+.+.+. ++++++.++++.++.|+++.+++.+ +|||++++++.+++++++|+.++..+ +.+.+..|++++++++++|
T Consensus 84 ~~~~~~~~~~~~a~~a~~l~~~~Pl~~~lla~~-~~e~~~~~~~~~~~la~~Gv~ll~~~~~~~~~~~G~l~~l~a~~~~ 162 (292)
T PRK11272 84 GMVTVAEHQNVPSGIAAVVVATVPLFTLCFSRL-FGIRTRKLEWLGIAIGLAGIVLLNSGGNLSGNPWGAILILIASASW 162 (292)
T ss_pred HHHHHHHHccCcHHHHHHHHHHHHHHHHHHHHH-hcccCchhHHHHHHHHHHhHHHHhcCcccccchHHHHHHHHHHHHH
Confidence 7888898 9999999999999999999999986 69999999999999999999887644 3345567999999999999
Q ss_pred HHHHHHHHHHhhcCCCCCChHHHHHHHhHHHHHHHHHHHHHhhchhhhhcCCCcchhHHHHHHHHHHHHHHHHHHHHHhc
Q 018749 179 ATRLVMIQILLTSKGITLNPITSLYYVAPCCLVFLLVPWIFVELPILRETSSFHFDFVIFGTNSLCAFALNLAVFLLVGK 258 (351)
Q Consensus 179 a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (351)
|.+.+..||..+ + ++.....+....+.+.+.+.....+.+.. ...+......++..+.+.+...+..+++++++
T Consensus 163 a~~~~~~~~~~~----~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~i~~l~i~~s~~~~~l~~~~~~~ 236 (292)
T PRK11272 163 AFGSVWSSRLPL----P-VGMMAGAAEMLAAGVVLLIASLLSGERLT-ALPTLSGFLALGYLAVFGSIIAISAYMYLLRN 236 (292)
T ss_pred HHHHHHHHhcCC----C-cchHHHHHHHHHHHHHHHHHHHHcCCccc-ccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 999999998632 1 23444556666666665554433322111 11111111233333334444555667889999
Q ss_pred chhHHHHHHhhhhhHHHhhhhHhhcCCccchhhHHHHHHHHHhHhhhhhh
Q 018749 259 TSALTMNVAGVVKDWLLIAFSWSVIKDTVTPINLFGYGLAFLGVAYYNHS 308 (351)
Q Consensus 259 ~~~~~~s~~~~l~~v~~~~~~~~~~~e~~s~~~~~G~~li~~g~~l~~~~ 308 (351)
.++.+.+.+.+++|+++.+++++++||++++.+++|+.+++.|+.+.+..
T Consensus 237 ~~~~~~s~~~~l~Pi~a~i~~~~~l~E~~t~~~iiG~~lIi~gv~~~~~~ 286 (292)
T PRK11272 237 VRPALATSYAYVNPVVAVLLGTGLGGETLSPIEWLALGVIVFAVVLVTLG 286 (292)
T ss_pred cCHHHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999887653
No 7
>PF06027 DUF914: Eukaryotic protein of unknown function (DUF914); InterPro: IPR009262 This family consists of several hypothetical proteins of unknown function. Some of the sequences in this family are annotated as putative membrane proteins.
Probab=99.96 E-value=8.8e-27 Score=209.98 Aligned_cols=273 Identities=13% Similarity=0.139 Sum_probs=212.9
Q ss_pred HHHHHHHHHhhcccccccccHHHHHHHHHHHHHHHHHHHHHHhcccC-CCCCChhhHhHHHHHHHHHHHHHHhhhhhhcc
Q 018749 30 FTVIVYNKYILDKKMYNWPFPISLTMIHMSFCATLAFLLIKVFKFVE-PVTMSRDLYFSSVVPIGALYSLSLWLSNSAYI 108 (351)
Q Consensus 30 ~~~~~~~K~~l~~~~~~~~~p~~~~~~r~~~~~~~l~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~~~~~~~~~al~ 108 (351)
.+....+..+-+ .+++.|.+-+++-++.-.++.......++..+ ..+..+++ ++..+..+++-...+.+.+.|++
T Consensus 26 ~~t~~~s~~l~~---~~~~~P~~Qs~~~Y~~l~~vy~~~~~~r~~~~~~~~~~~~~-~w~y~lla~~Dv~aN~~~v~a~~ 101 (334)
T PF06027_consen 26 TGTGTFSSLLAN---KGVNIPTFQSFFNYVLLALVYTPILLYRRGFKKWLKVLKRP-WWKYFLLALLDVEANYLVVLAYQ 101 (334)
T ss_pred HhHHHHHHHHHh---cCccCcHHHHHHHHHHHHHHHhhhhhhccccccchhhcchh-HHHHHHHHHHHHHHHHHHHHHhh
Confidence 344445556654 47788999999988765554444333222211 12222334 35577788999999999999999
Q ss_pred cccHHHHHHHHHHHHHHHHHHHHHhccccccchhhHHHHHHHhhhheeeecC---------cccchhHHHHHHHHHHHHH
Q 018749 109 YLSVSFIQMLKALMPVAVYSIGVTFKKESFKSDTMCNMVSISVGVAIAAYGE---------AKFDSWGVVLQLGAVAFEA 179 (351)
Q Consensus 109 ~~~~s~~~vi~~~~pi~~~ll~~~~~~e~~~~~~~~~~~l~~~Gv~l~~~~~---------~~~~~~G~~~~l~s~~~~a 179 (351)
|++++.++++.++..+++++++++++|+|+++.|++|++++++|+.++...| .+....|++++++|+++||
T Consensus 102 yTsvtS~~lL~~~~i~~~~~LS~~fL~~ry~~~~~~gv~i~i~Gv~lv~~sD~~~~~~~~~~~~~i~GDll~l~~a~lya 181 (334)
T PF06027_consen 102 YTSVTSVQLLDCTSIPFVMILSFIFLKRRYSWFHILGVLICIAGVVLVVVSDVLSGSDSSSGSNPILGDLLALLGAILYA 181 (334)
T ss_pred cccHhHHHhhhhhhhHHHHHHHHHHHHhhhhHHHHHHHHHHHhhhhheeeecccccccCCCCCccchhHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999877643 1235789999999999999
Q ss_pred HHHHHHHHHhhcCCCCCChHHHHHHHhHHHHHHHHHHHHHhhchhhhhcCCCcch-hHHHHHHHHHHHHHHHHHHHHHhc
Q 018749 180 TRLVMIQILLTSKGITLNPITSLYYVAPCCLVFLLVPWIFVELPILRETSSFHFD-FVIFGTNSLCAFALNLAVFLLVGK 258 (351)
Q Consensus 180 ~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 258 (351)
++++++|+..++ .+..+.+.+..+++.++..+.....|..++.. ..|+.. ..+++..+++-+..+...-..++.
T Consensus 182 ~~nV~~E~~v~~----~~~~~~lg~~Glfg~ii~~iq~~ile~~~i~~-~~w~~~~~~~~v~~~~~lf~~y~l~p~~l~~ 256 (334)
T PF06027_consen 182 VSNVLEEKLVKK----APRVEFLGMLGLFGFIISGIQLAILERSGIES-IHWTSQVIGLLVGYALCLFLFYSLVPIVLRM 256 (334)
T ss_pred HHHHHHHHhccc----CCHHHHHHHHHHHHHHHHHHHHHheehhhhhc-cCCChhhHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 999999999873 46778888888888887777766667655543 233332 344455555556666666678999
Q ss_pred chhHHHHHHhhhhhHHHhhhhHhhcCCccchhhHHHHHHHHHhHhhhhhhhhh
Q 018749 259 TSALTMNVAGVVKDWLLIAFSWSVIKDTVTPINLFGYGLAFLGVAYYNHSKLQ 311 (351)
Q Consensus 259 ~~~~~~s~~~~l~~v~~~~~~~~~~~e~~s~~~~~G~~li~~g~~l~~~~~~~ 311 (351)
.+|+..++......+++++++++++|+++++..++|.+++++|..+|+..+++
T Consensus 257 ssAt~~nLsLLTsd~~ali~~i~~f~~~~~~ly~~af~lIiiG~vvy~~~~~~ 309 (334)
T PF06027_consen 257 SSATFFNLSLLTSDFYALIIDIFFFGYKFSWLYILAFALIIIGFVVYNLAESP 309 (334)
T ss_pred CccceeehHHHHhhHHHHHHHHHhcCccccHHHHHHHHHHHHHhheEEccCCc
Confidence 99999999999999999999999999999999999999999999999876643
No 8
>PRK11689 aromatic amino acid exporter; Provisional
Probab=99.96 E-value=1.2e-26 Score=210.14 Aligned_cols=266 Identities=12% Similarity=0.037 Sum_probs=192.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhcccccccccHHHHHHHHHHHHHHHHHHHHHHhcccCCCCCChhhHhHHHHHHHHHH
Q 018749 17 LSYTYVAIWIFLSFTVIVYNKYILDKKMYNWPFPISLTMIHMSFCATLAFLLIKVFKFVEPVTMSRDLYFSSVVPIGALY 96 (351)
Q Consensus 17 ~~~~~~~~~~~~~~~~~~~~K~~l~~~~~~~~~p~~~~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 96 (351)
.....+.+|.. .....|..+ .+++ |..+.++|+.++.+++.++.. .++.++.+ .+..+..++.+
T Consensus 8 ~~l~a~~~Wg~----~~~~~k~~~----~~~~-P~~~~~~R~~~a~l~l~~~~~---~~~~~~~~----~~~~~~~~l~~ 71 (295)
T PRK11689 8 IGLIAILLWST----MVGLIRGVS----ESLG-PVGGAAMIYSVSGLLLLLTVG---FPRLRQFP----KRYLLAGGLLF 71 (295)
T ss_pred HHHHHHHHHHH----HHHHHHHHH----ccCC-hHHHHHHHHHHHHHHHHHHcc---cccccccc----HHHHHHHhHHH
Confidence 34444555544 445779988 4798 999999999999887765431 11111111 23345556666
Q ss_pred HHHHhhhhhhccc----ccHHHHHHHHHHHHHHHHHHHHHhccccccchhhHHHHHHHhhhheeeecCcc----------
Q 018749 97 SLSLWLSNSAYIY----LSVSFIQMLKALMPVAVYSIGVTFKKESFKSDTMCNMVSISVGVAIAAYGEAK---------- 162 (351)
Q Consensus 97 ~~~~~~~~~al~~----~~~s~~~vi~~~~pi~~~ll~~~~~~e~~~~~~~~~~~l~~~Gv~l~~~~~~~---------- 162 (351)
+....+.+.+++| ++++.+.++.++.|+++.+++++++|||++++++++++++++|+.++..++.+
T Consensus 72 ~~~~~~~~~a~~~~~~~~~a~~a~~l~~~~Pi~~~ll~~~~~~e~~~~~~~~g~~l~~~Gv~li~~~~~~~~~~~~~~~~ 151 (295)
T PRK11689 72 VSYEICLALSLGYANTRRQAIEVGMVNYLWPSLTILFAVLFNGQKANWLLIPGLLLALAGVAWVLGGDNGLSLAELINNI 151 (295)
T ss_pred HHHHHHHHHHHHHhhccccchHHHHHHHHhHHHHHHHHHHHhcCCccHHHHHHHHHHHHhHhheecCCccchhhhhhhcc
Confidence 7777777777754 67788899999999999999999999999999999999999999887754321
Q ss_pred -cchhHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCChHHHHHHHhHHHHHHHHHHHHHhhchhhhhcCCCcchhHHHHHH
Q 018749 163 -FDSWGVVLQLGAVAFEATRLVMIQILLTSKGITLNPITSLYYVAPCCLVFLLVPWIFVELPILRETSSFHFDFVIFGTN 241 (351)
Q Consensus 163 -~~~~G~~~~l~s~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (351)
.+..|++++++++++||.|+++.||..+ +.++..... ..+.+.+.+.....+.+. ...++ ..+..++..
T Consensus 152 ~~~~~G~~~~l~aa~~~A~~~v~~k~~~~----~~~~~~~~~---~~~~~~l~~~~~~~~~~~--~~~~~-~~~~~l~~~ 221 (295)
T PRK11689 152 ASNPLSYGLAFIGAFIWAAYCNVTRKYAR----GKNGITLFF---ILTALALWIKYFLSPQPA--MVFSL-PAIIKLLLA 221 (295)
T ss_pred ccChHHHHHHHHHHHHHHHHHHHHhhccC----CCCchhHHH---HHHHHHHHHHHHHhcCcc--ccCCH-HHHHHHHHH
Confidence 2356999999999999999999999844 234544321 222233333222222211 11112 123333444
Q ss_pred HHHHHHHHHHHHHHHhcchhHHHHHHhhhhhHHHhhhhHhhcCCccchhhHHHHHHHHHhHhhhhhh
Q 018749 242 SLCAFALNLAVFLLVGKTSALTMNVAGVVKDWLLIAFSWSVIKDTVTPINLFGYGLAFLGVAYYNHS 308 (351)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~s~~~~l~~v~~~~~~~~~~~e~~s~~~~~G~~li~~g~~l~~~~ 308 (351)
++.+...+.++++++++.+|.+.+.+.+++|+++++++++++||++++.+++|+++++.|+.+....
T Consensus 222 ~~~t~~~~~l~~~al~~~~a~~~s~~~~l~Pv~a~i~~~~~lgE~~~~~~~iG~~lI~~gv~~~~~~ 288 (295)
T PRK11689 222 AAAMGFGYAAWNVGILHGNMTLLATASYFTPVLSAALAALLLSTPLSFSFWQGVAMVTAGSLLCWLA 288 (295)
T ss_pred HHHHHHHHHHHHHHHHccCHHHHHHHHHhHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHhHHHHhhh
Confidence 4556666777889999999999999999999999999999999999999999999999999876543
No 9
>PRK15430 putative chloramphenical resistance permease RarD; Provisional
Probab=99.96 E-value=1.1e-26 Score=210.50 Aligned_cols=276 Identities=9% Similarity=0.066 Sum_probs=191.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhcccccccccHHHHHHHHHHHHHHHHHHHHHHhcccCC---CCCChhhHhHHHHHHHHH
Q 018749 19 YTYVAIWIFLSFTVIVYNKYILDKKMYNWPFPISLTMIHMSFCATLAFLLIKVFKFVEP---VTMSRDLYFSSVVPIGAL 95 (351)
Q Consensus 19 ~~~~~~~~~~~~~~~~~~K~~l~~~~~~~~~p~~~~~~r~~~~~~~l~~~~~~~~~~~~---~~~~~~~~~~~~~~~~l~ 95 (351)
..+.+...++++......|... +++ |..+.++|++++.+.+.++....+..++ ...++++ ....+..++.
T Consensus 10 ~~~~l~a~~~wg~~~~~~k~~~-----~~~-~~~~~~~R~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ 82 (296)
T PRK15430 10 VLLALAAYFIWGIAPAYFKLIY-----YVP-ADEILTHRVIWSFFFMVVLMSICRQWSYLKTLIQTPQK-IFMLAVSAVL 82 (296)
T ss_pred HHHHHHHHHHHHHHHHHHHHhc-----CCC-HHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHcCHHH-HHHHHHHHHH
Confidence 3333333333344444568753 588 9999999999998766655443222111 0112332 1223455677
Q ss_pred HHHHHhhhhhhcccccHHHHHHHHHHHHHHHHHHHHHhccccccchhhHHHHHHHhhhheeeecCcccchhHHHHHHHHH
Q 018749 96 YSLSLWLSNSAYIYLSVSFIQMLKALMPVAVYSIGVTFKKESFKSDTMCNMVSISVGVAIAAYGEAKFDSWGVVLQLGAV 175 (351)
Q Consensus 96 ~~~~~~~~~~al~~~~~s~~~vi~~~~pi~~~ll~~~~~~e~~~~~~~~~~~l~~~Gv~l~~~~~~~~~~~G~~~~l~s~ 175 (351)
.+.++.++++|++++|++.++++.++.|+++.+++++++|||+++++|.+++++++|+.++...+.+. ..++++++
T Consensus 83 ~~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~v~l~~~~~l~E~~~~~~~~g~~l~~~Gv~li~~~~~~~----~~~~l~aa 158 (296)
T PRK15430 83 IGGNWLLFIWAVNNHHMLEASLGYFINPLVNIVLGMIFLGERFRRMQWLAVILAICGVLVQLWTFGSL----PIIALGLA 158 (296)
T ss_pred HHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHcCCc----cHHHHHHH
Confidence 88899999999999999999999999999999999999999999999999999999999875433222 24688899
Q ss_pred HHHHHHHHHHHHHhhcCCCCCChHHHHHHHhHHHHHHHHHHHHHhhchhhh-hcCCCcchhHHHHHHHHHHHHHHHHHHH
Q 018749 176 AFEATRLVMIQILLTSKGITLNPITSLYYVAPCCLVFLLVPWIFVELPILR-ETSSFHFDFVIFGTNSLCAFALNLAVFL 254 (351)
Q Consensus 176 ~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (351)
++||.|.++.|+..++ + ..+......+....+.+...+. .+.+... ....+ ..+..++..++.+...+.+++.
T Consensus 159 ~~~a~~~i~~r~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~-~~~~~~~~~g~~t~i~~~~~~~ 232 (296)
T PRK15430 159 FSFAFYGLVRKKIAVE-A-QTGMLIETMWLLPVAAIYLFAI---ADSSTSHMGQNPM-SLNLLLIAAGIVTTVPLLCFTA 232 (296)
T ss_pred HHHHHHHHHHHhcCCC-C-chhHHHHHHHHHHHHHHHHHHH---ccCCcccccCCcH-HHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999986321 1 1222333333443333332111 1111110 11111 1123344444455566778889
Q ss_pred HHhcchhHHHHHHhhhhhHHHhhhhHhhcCCccchhhHHHHHHHHHhHhhhhhhhhh
Q 018749 255 LVGKTSALTMNVAGVVKDWLLIAFSWSVIKDTVTPINLFGYGLAFLGVAYYNHSKLQ 311 (351)
Q Consensus 255 ~~~~~~~~~~s~~~~l~~v~~~~~~~~~~~e~~s~~~~~G~~li~~g~~l~~~~~~~ 311 (351)
++++.+|...+.+.+++|++++++|++++||++++.+++|+++++.|+.+...+...
T Consensus 233 a~~~~~a~~~s~~~~l~Pv~a~~~g~l~l~E~~~~~~~~G~~lI~~~~~v~~~~~~~ 289 (296)
T PRK15430 233 AATRLRLSTLGFFQYIGPTLMFLLAVTFYGEKPGADKMVTFAFIWVALAIFVMDAIY 289 (296)
T ss_pred HHhcCCHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999998887655443
No 10
>PRK11453 O-acetylserine/cysteine export protein; Provisional
Probab=99.96 E-value=4.9e-26 Score=206.64 Aligned_cols=275 Identities=12% Similarity=0.115 Sum_probs=191.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhcccccccccHHHHHHHHHHHHHHHHHHHHHHhcccCCCCCChhhHhHHHHHHHHH
Q 018749 16 LLSYTYVAIWIFLSFTVIVYNKYILDKKMYNWPFPISLTMIHMSFCATLAFLLIKVFKFVEPVTMSRDLYFSSVVPIGAL 95 (351)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~~~K~~l~~~~~~~~~p~~~~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 95 (351)
...+...++|.. .....|..++ +++ |..+.++|++++++.++++.+ +++.+++ ..+..++.
T Consensus 7 l~~l~~~~~Wg~----~~~~~k~~~~----~~~-p~~~~~~R~~~a~~~l~~~~~------~~~~~~~----~~~~~g~~ 67 (299)
T PRK11453 7 VLALLVVVVWGL----NFVVIKVGLH----NMP-PLMLAGLRFMLVAFPAIFFVA------RPKVPLN----LLLGYGLT 67 (299)
T ss_pred HHHHHHHHHHhh----hHHHHHHHHh----cCC-HHHHHHHHHHHHHHHHHHHhc------CCCCchH----HHHHHHHH
Confidence 344444555544 4446688884 788 999999999988766555432 1122222 23333443
Q ss_pred -HHHHHhhhhhhccc-ccHHHHHHHHHHHHHHHHHHHHHhccccccchhhHHHHHHHhhhheeeecC---cccchhHHHH
Q 018749 96 -YSLSLWLSNSAYIY-LSVSFIQMLKALMPVAVYSIGVTFKKESFKSDTMCNMVSISVGVAIAAYGE---AKFDSWGVVL 170 (351)
Q Consensus 96 -~~~~~~~~~~al~~-~~~s~~~vi~~~~pi~~~ll~~~~~~e~~~~~~~~~~~l~~~Gv~l~~~~~---~~~~~~G~~~ 170 (351)
......+.+.+++| .|++.+.++.++.|+++.+++++++|||++.+++++++++++|+.++..++ .+.+..|+++
T Consensus 68 ~~~~~~~~~~~~~~~~~~a~~a~~l~~~~pi~~~ll~~~~l~e~~~~~~~~~~~l~~~Gv~ll~~~~~~~~~~~~~G~~l 147 (299)
T PRK11453 68 ISFGQFAFLFCAINFGMPAGLASLVLQAQAFFTIVLGAFTFGERLQGKQLAGIALAIFGVLVLIEDSLNGQHVAMLGFML 147 (299)
T ss_pred HHHHHHHHHHHHHHhcCCHHHHHHHHHhHHHHHHHHHHHHhcCcCcHHHHHHHHHHHHhHHHhccccCCCcchhHHHHHH
Confidence 34455566788887 689999999999999999999999999999999999999999998876532 2234579999
Q ss_pred HHHHHHHHHHHHHHHHHHhhcCCCCCChHHHHHHHhHHHHHHHHHHHHHhhchhh--hhcCCCc-chh-HHHHHHHHHHH
Q 018749 171 QLGAVAFEATRLVMIQILLTSKGITLNPITSLYYVAPCCLVFLLVPWIFVELPIL--RETSSFH-FDF-VIFGTNSLCAF 246 (351)
Q Consensus 171 ~l~s~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~--~~~~~~~-~~~-~~~~~~~~~~~ 246 (351)
++.++++|+.+.+++||..++.+ ..+......+....+.+.........|++.. .+...++ ..+ .++..+.+...
T Consensus 148 ~l~aal~~a~~~v~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~i~~t~ 226 (299)
T PRK11453 148 TLAAAFSWACGNIFNKKIMSHST-RPAVMSLVVWSALIPIIPFFVASLILDGSATMIHSLVTIDMTTILSLMYLAFVATI 226 (299)
T ss_pred HHHHHHHHHHHHHHHHHHhcccC-ccchhHHHHHHHHHHHHHHHHHHHHhcCchhhhhhhccCCHHHHHHHHHHHHHHHH
Confidence 99999999999999999755321 2223333344444443333322222332211 0111111 123 33334444444
Q ss_pred HHHHHHHHHHhcchhHHHHHHhhhhhHHHhhhhHhhcCCccchhhHHHHHHHHHhHhhhhhhhh
Q 018749 247 ALNLAVFLLVGKTSALTMNVAGVVKDWLLIAFSWSVIKDTVTPINLFGYGLAFLGVAYYNHSKL 310 (351)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~s~~~~l~~v~~~~~~~~~~~e~~s~~~~~G~~li~~g~~l~~~~~~ 310 (351)
..+..++..+++.++.+.+...+++|+++.+++++++||++++.+++|+++++.|+.+..+.++
T Consensus 227 ~~~~l~~~~l~~~~a~~~s~~~~l~Pv~a~~~~~l~lgE~~~~~~~iG~~lI~~gv~l~~~~~~ 290 (299)
T PRK11453 227 VGYGIWGTLLGRYETWRVAPLSLLVPVVGLASAALLLDERLTGLQFLGAVLIMAGLYINVFGLR 290 (299)
T ss_pred HHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHhCCCccHHHHHHHHHHHHHHHHHhcchh
Confidence 4556677889999999999999999999999999999999999999999999999988765553
No 11
>PF08449 UAA: UAA transporter family; InterPro: IPR013657 This family includes transporters with a specificity for UDP-N-acetylglucosamine []. ; GO: 0055085 transmembrane transport
Probab=99.96 E-value=4.5e-26 Score=207.11 Aligned_cols=273 Identities=24% Similarity=0.373 Sum_probs=219.4
Q ss_pred HHHHHHHhhcccccccccHHHHHHHHHHHHHHHHHHHHHHhcccCCCCCChhhHhHHHHHHHHHHHHHHhhhhhhccccc
Q 018749 32 VIVYNKYILDKKMYNWPFPISLTMIHMSFCATLAFLLIKVFKFVEPVTMSRDLYFSSVVPIGALYSLSLWLSNSAYIYLS 111 (351)
Q Consensus 32 ~~~~~K~~l~~~~~~~~~p~~~~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~al~~~~ 111 (351)
....++.+..+ .++.++|.++++.|++...+...+.....+..++++.+ ++.+++.++++.+...+.|.|++|+|
T Consensus 15 ~g~~qE~i~~~-~~~~~~~~~lt~~q~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~al~~i~ 89 (303)
T PF08449_consen 15 YGILQEKIMTT-PYGSPFPLFLTFVQFAFNALFSFILLSLFKFPKSRKIP----LKKYAILSFLFFLASVLSNAALKYIS 89 (303)
T ss_pred HHHHHHHHHcC-CCCCcccHHHHHHHHHHHHHHHHHHHHhccccCCCcCh----HHHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 33444555532 22224699999999999888777766544422333333 45678889999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhccccccchhhHHHHHHHhhhheeeecCcc----c------chhHHHHHHHHHHHHHHH
Q 018749 112 VSFIQMLKALMPVAVYSIGVTFKKESFKSDTMCNMVSISVGVAIAAYGEAK----F------DSWGVVLQLGAVAFEATR 181 (351)
Q Consensus 112 ~s~~~vi~~~~pi~~~ll~~~~~~e~~~~~~~~~~~l~~~Gv~l~~~~~~~----~------~~~G~~~~l~s~~~~a~~ 181 (351)
.+...+++++.|+++++++++++|||++.+|++++++.++|+++....+.+ . +..|+++.+++.++.+++
T Consensus 90 ~p~~~~~ks~~~i~vmi~~~l~~~k~y~~~~~~~v~li~~Gv~~~~~~~~~~~~~~~~~~~~~~~G~~ll~~sl~~~a~~ 169 (303)
T PF08449_consen 90 YPTQIVFKSSKPIPVMILGVLILGKRYSRRQYLSVLLITIGVAIFTLSDSSSSSSSNSSSFSSALGIILLLLSLLLDAFT 169 (303)
T ss_pred hHHHHHHhhhHHHHHHHHHHHhcCccccHHHHHHHHHHHhhHheeeecccccccccccccccchhHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999998765421 1 123999999999999999
Q ss_pred HHHHHHHhhcCCCCCChHHHHHHHhHHHHHHHHHHHHH---hhchhhhhc-CCCcchhHHHHHHHHHHHHHHHHHHHHHh
Q 018749 182 LVMIQILLTSKGITLNPITSLYYVAPCCLVFLLVPWIF---VELPILRET-SSFHFDFVIFGTNSLCAFALNLAVFLLVG 257 (351)
Q Consensus 182 ~v~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~---~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (351)
.+++||.++++ +.++.+.++|....+.+..++.... .|..+.... ...+..+..++..++.++..+...+.+++
T Consensus 170 ~~~qe~~~~~~--~~~~~~~mfy~n~~~~~~~~~~~~~l~~~~~~~~~~f~~~~p~~~~~l~~~s~~~~~g~~~i~~~~~ 247 (303)
T PF08449_consen 170 GVYQEKLFKKY--GKSPWELMFYTNLFSLPFLLILLFLLPTGEFRSAIRFISAHPSVLLYLLLFSLTGALGQFFIFYLIK 247 (303)
T ss_pred HHHHHHHHHHh--CCcHHHHHHHHHHHHHHHHHHHHHHHHhhHhhHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999998865 4588999999999998887766655 122111111 11122356677778888888888889999
Q ss_pred cchhHHHHHHhhhhhHHHhhhhHhhcCCccchhhHHHHHHHHHhHhhhhhhhhh
Q 018749 258 KTSALTMNVAGVVKDWLLIAFSWSVIKDTVTPINLFGYGLAFLGVAYYNHSKLQ 311 (351)
Q Consensus 258 ~~~~~~~s~~~~l~~v~~~~~~~~~~~e~~s~~~~~G~~li~~g~~l~~~~~~~ 311 (351)
+.+|++.++...+|.++++++|+++||+++++.||+|+++++.|..+|.+.+++
T Consensus 248 ~~~al~~t~v~t~Rk~~sillS~~~f~~~~~~~~~~G~~lv~~g~~~~~~~~~k 301 (303)
T PF08449_consen 248 KFSALTTTIVTTLRKFLSILLSVIIFGHPLSPLQWIGIVLVFAGIFLYSYAKKK 301 (303)
T ss_pred hcCchhhhhHHHHHHHHHHHHHHHhcCCcCChHHHHHHHHhHHHHHHHHHhhcc
Confidence 999999999999999999999999999999999999999999999999987764
No 12
>KOG1444 consensus Nucleotide-sugar transporter VRG4/SQV-7 [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]
Probab=99.96 E-value=1.2e-26 Score=201.71 Aligned_cols=292 Identities=18% Similarity=0.233 Sum_probs=248.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhcccccccccHHHHHHHHHHHHHHHHHHHHHHhcccCCCCCChhhHhHHHHHHHH
Q 018749 15 ILLSYTYVAIWIFLSFTVIVYNKYILDKKMYNWPFPISLTMIHMSFCATLAFLLIKVFKFVEPVTMSRDLYFSSVVPIGA 94 (351)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~K~~l~~~~~~~~~p~~~~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 94 (351)
....+...+.|+++|+.+++.||++++ .++||.-+++..+|.+.+.+.+....+ .|..+.++++++. .|.++|.++
T Consensus 10 ~~~~l~sa~~Y~~sS~lm~vvNK~vls--~y~f~~~l~l~~~Q~l~s~~~v~~lk~-~~lv~~~~l~~~~-~kk~~P~~~ 85 (314)
T KOG1444|consen 10 QSSPLLSALFYCLSSILMTVVNKIVLS--SYNFPMGLLLMLLQSLASVLVVLVLKR-LGLVNFRPLDLRT-AKKWFPVSL 85 (314)
T ss_pred hhhhhHHHHHHHHHHHHHHHHHHHHHh--cCCCcHHHHHHHHHHHHHHHHHHHHHH-hceeecCCcChHH-HHHHccHHH
Confidence 334566778999999999999999997 455655555556999888777666544 6777788888887 588999999
Q ss_pred HHHHHHhhhhhhcccccHHHHHHHHHHHHHHHHHHHHHhccccccchhhHHHHHHHhhhheeeecCcccchhHHHHHHHH
Q 018749 95 LYSLSLWLSNSAYIYLSVSFIQMLKALMPVAVYSIGVTFKKESFKSDTMCNMVSISVGVAIAAYGEAKFDSWGVVLQLGA 174 (351)
Q Consensus 95 ~~~~~~~~~~~al~~~~~s~~~vi~~~~pi~~~ll~~~~~~e~~~~~~~~~~~l~~~Gv~l~~~~~~~~~~~G~~~~l~s 174 (351)
.+.++......+++|+|+++.++++..+|+++++.+.+++|.|++...|.++....+|.......|.+++..|+.|++..
T Consensus 86 lf~~~i~t~~~slk~lnVpm~tv~kn~tii~~ai~E~lf~~~~~~~~v~~Sv~~m~~~s~~~~~~d~sf~~~gY~w~~~n 165 (314)
T KOG1444|consen 86 LFVGMLFTGSKSLKYLNVPMFTVFKNLTIILTAIGEVLFFGKRPSNKVWASVFAMIIGSVAAAFTDLSFNLRGYSWALAN 165 (314)
T ss_pred HHHHHHHHccccccccCchHHHHHhhchHHHHHHhHHhhcCcCchhhHHHHHHHHHHHHHhhccccceecchhHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCChHHHHHHHhHHHHHHHHHHHHHhhchh-h-hhcCCCc--chhHHHHHHHHHHHHHHH
Q 018749 175 VAFEATRLVMIQILLTSKGITLNPITSLYYVAPCCLVFLLVPWIFVELPI-L-RETSSFH--FDFVIFGTNSLCAFALNL 250 (351)
Q Consensus 175 ~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~-~-~~~~~~~--~~~~~~~~~~~~~~~~~~ 250 (351)
.++.+.+.++.|+..+.. +.+.+.+++|..+.+.+.+.+.....+..+ . .+.+.|. ..+..+.++++++++.++
T Consensus 166 ~~~~a~~~v~~kk~vd~~--~l~~~~lv~yNnl~~L~~l~~~~~~~ge~~~l~~~~~~~~~~~~~~~~~lScv~gf~isy 243 (314)
T KOG1444|consen 166 CLTTAAFVVYVKKSVDSA--NLNKFGLVFYNNLLSLPPLLILSFITGELDALSLNFDNWSDSSVLVVMLLSCVMGFGISY 243 (314)
T ss_pred HHHHHHHHHHHHHhhccc--cccceeEEeehhHHHHHHHHHHHHHhcchHHHHhhcccccchhHHHHHHHHHHHHHHHHH
Confidence 999999999999987643 568888999999999988877765544322 1 1122232 236778999999999999
Q ss_pred HHHHHHhcchhHHHHHHhhhhhHHHhhhhHhhcCCccchhhHHHHHHHHHhHhhhhhhhhhh
Q 018749 251 AVFLLVGKTSALTMNVAGVVKDWLLIAFSWSVIKDTVTPINLFGYGLAFLGVAYYNHSKLQA 312 (351)
Q Consensus 251 ~~~~~~~~~~~~~~s~~~~l~~v~~~~~~~~~~~e~~s~~~~~G~~li~~g~~l~~~~~~~~ 312 (351)
+.++|.+..++++.++.+..+...+.+...+++|++.++..++|..+.+.|..+|++.+.++
T Consensus 244 ~s~~ct~~~SAtT~tivG~~n~l~t~l~~ll~~d~~~~~~n~~gll~~~~ggv~Y~~~~~~~ 305 (314)
T KOG1444|consen 244 TSFLCTRVNSATTTTIVGAKNKLLTYLGGLLFGDKPFTFLNVIGLLVGFFGGVLYSYATFRK 305 (314)
T ss_pred HHHHHHhhccccceeehhhhhhHHHHHHHHhcCCceechhhhHHHHHHhhhhhHHhhhhhhh
Confidence 99999999999999999966667777777777788999999999999999999999887554
No 13
>PRK10532 threonine and homoserine efflux system; Provisional
Probab=99.95 E-value=1.1e-25 Score=203.63 Aligned_cols=268 Identities=12% Similarity=0.014 Sum_probs=192.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhcccccccccHHHHHHHHHHHHHHHHHHHHHHhcccCCCCCChhhHhHHHHHHHH
Q 018749 15 ILLSYTYVAIWIFLSFTVIVYNKYILDKKMYNWPFPISLTMIHMSFCATLAFLLIKVFKFVEPVTMSRDLYFSSVVPIGA 94 (351)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~K~~l~~~~~~~~~p~~~~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 94 (351)
.......++.|. ......|+.++ +++ |..+.++|++++.++++++.+.. +.+.+++++ +..+..++
T Consensus 14 ~~~~~la~~~~~----~~~~~~K~~~~----~~~-~~~~~~~R~~~a~l~l~~~~~~~----~~~~~~~~~-~~~~~~g~ 79 (293)
T PRK10532 14 ILLLLIAMASIQ----SGASLAKSLFP----LVG-APGVTALRLALGTLILIAIFKPW----RLRFAKEQR-LPLLFYGV 79 (293)
T ss_pred HHHHHHHHHHHH----hhHHHHHHHHH----HcC-HHHHHHHHHHHHHHHHHHHHhHH----hccCCHHHH-HHHHHHHH
Confidence 334444444443 34447899994 688 99999999999998877664311 123345553 45666777
Q ss_pred HHHHHHhhhhhhcccccHHHHHHHHHHHHHHHHHHHHHhccccccchhhHHHHHHHhhhheeeecC---cccchhHHHHH
Q 018749 95 LYSLSLWLSNSAYIYLSVSFIQMLKALMPVAVYSIGVTFKKESFKSDTMCNMVSISVGVAIAAYGE---AKFDSWGVVLQ 171 (351)
Q Consensus 95 ~~~~~~~~~~~al~~~~~s~~~vi~~~~pi~~~ll~~~~~~e~~~~~~~~~~~l~~~Gv~l~~~~~---~~~~~~G~~~~ 171 (351)
+++..+.+.+++++|+|++.+.++.++.|+++.+++ +||+. +..++.++++|+.++...+ .+.+..|++++
T Consensus 80 ~~~~~~~~~~~al~~~~~~~a~~l~~t~Pi~~~ll~----~~~~~--~~~~~~i~~~Gv~li~~~~~~~~~~~~~G~ll~ 153 (293)
T PRK10532 80 SLGGMNYLFYLSIQTVPLGIAVALEFTGPLAVALFS----SRRPV--DFVWVVLAVLGLWFLLPLGQDVSHVDLTGAALA 153 (293)
T ss_pred HHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHh----cCChH--HHHHHHHHHHHHheeeecCCCcccCChHHHHHH
Confidence 788888889999999999999999999999999876 35554 3455677899988765322 23456799999
Q ss_pred HHHHHHHHHHHHHHHHHhhcCCCCCChHHHHHHHhHHHHHHHHHHHHHhhchhhhhcCCCcchhHHHHHHHHHHHHHHHH
Q 018749 172 LGAVAFEATRLVMIQILLTSKGITLNPITSLYYVAPCCLVFLLVPWIFVELPILRETSSFHFDFVIFGTNSLCAFALNLA 251 (351)
Q Consensus 172 l~s~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (351)
++++++||.|.++.||..++ .++.... +....+.+.+.+.....+. .. ..++......+..+.+.+...+..
T Consensus 154 l~aa~~~a~~~v~~r~~~~~----~~~~~~~-~~~~~~~~~l~~~~~~~~~-~~--~~~~~~~~~~l~lgv~~t~~~~~l 225 (293)
T PRK10532 154 LGAGACWAIYILSGQRAGAE----HGPATVA-IGSLIAALIFVPIGALQAG-EA--LWHWSILPLGLAVAILSTALPYSL 225 (293)
T ss_pred HHHHHHHHHHHHHHHHHhcc----CCchHHH-HHHHHHHHHHHHHHHHccC-cc--cCCHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999998542 3454443 4455555555544433222 11 111111112234445555555567
Q ss_pred HHHHHhcchhHHHHHHhhhhhHHHhhhhHhhcCCccchhhHHHHHHHHHhHhhhhhhhh
Q 018749 252 VFLLVGKTSALTMNVAGVVKDWLLIAFSWSVIKDTVTPINLFGYGLAFLGVAYYNHSKL 310 (351)
Q Consensus 252 ~~~~~~~~~~~~~s~~~~l~~v~~~~~~~~~~~e~~s~~~~~G~~li~~g~~l~~~~~~ 310 (351)
+++++++.++.+++++.+++|++++++|++++||++++.+++|+.+++.|.+.+....+
T Consensus 226 ~~~~~~~~~a~~as~~~~l~Pv~a~l~~~l~lgE~~~~~~~iG~~lIl~~~~~~~~~~~ 284 (293)
T PRK10532 226 EMIALTRLPTRTFGTLMSMEPALAAVSGMIFLGETLTLIQWLALGAIIAASMGSTLTIR 284 (293)
T ss_pred HHHHHHhcChhHHHHHHHhHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHHhcCC
Confidence 78999999999999999999999999999999999999999999999999999875543
No 14
>TIGR00950 2A78 Carboxylate/Amino Acid/Amine Transporter.
Probab=99.95 E-value=8.7e-26 Score=201.23 Aligned_cols=254 Identities=13% Similarity=0.045 Sum_probs=195.8
Q ss_pred HHHHHHHhhcccccccccHHHHHHHHHHHHHHHHHHHHHHhcccCCCCCChhhHhHHHHHHHHHHHHHHhhhhhhccccc
Q 018749 32 VIVYNKYILDKKMYNWPFPISLTMIHMSFCATLAFLLIKVFKFVEPVTMSRDLYFSSVVPIGALYSLSLWLSNSAYIYLS 111 (351)
Q Consensus 32 ~~~~~K~~l~~~~~~~~~p~~~~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~al~~~~ 111 (351)
.....|+.++ ...| |..+.+.|++.+.+.+.++.+ .+ .+++++.+.....++.+++++.+.+.|++|+|
T Consensus 4 ~~~~~k~~~~---~~~~-~~~~~~~r~~~~~l~l~~~~~-~~------~~~~~~~~~~~~~~~~~~l~~~~~~~a~~~~~ 72 (260)
T TIGR00950 4 TGVVIGQYLE---GQVP-LYFAVFRRLIFALLLLLPLLR-RR------PPLKRLLRLLLLGALQIGVFYVLYFVAVKRLP 72 (260)
T ss_pred hHHHHHHHHh---cCCC-HHHHHHHHHHHHHHHHHHHHH-hc------cCHhHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 3446789885 4566 999999999888777766544 22 23444445555566778999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhccccccchhhHHHHHHHhhhheeeecC-cccchhHHHHHHHHHHHHHHHHHHHHHHhh
Q 018749 112 VSFIQMLKALMPVAVYSIGVTFKKESFKSDTMCNMVSISVGVAIAAYGE-AKFDSWGVVLQLGAVAFEATRLVMIQILLT 190 (351)
Q Consensus 112 ~s~~~vi~~~~pi~~~ll~~~~~~e~~~~~~~~~~~l~~~Gv~l~~~~~-~~~~~~G~~~~l~s~~~~a~~~v~~~~~~~ 190 (351)
++.++++.++.|+++++++.+++|||++++++.+++++++|+.++..++ .+.+..|++++++++++|+.+.++.|+..+
T Consensus 73 ~~~~~ii~~~~P~~~~~~~~l~~~e~~~~~~~~gi~i~~~Gv~li~~~~~~~~~~~G~~~~l~a~~~~a~~~~~~k~~~~ 152 (260)
T TIGR00950 73 VGEAALLLYLAPLYVTLLSDLMGKERPRKLVLLAAVLGLAGAVLLLSDGNLSINPAGLLLGLGSGISFALGTVLYKRLVK 152 (260)
T ss_pred hhhhHHHHhhhHHHHHHHHHHHccCCCcHHHHHHHHHHHHhHHhhccCCcccccHHHHHHHHHHHHHHHHHHHHHhHHhh
Confidence 9999999999999999999999999999999999999999998876543 345678999999999999999999999865
Q ss_pred cCCCCCChHHHHHHHhHHHHHHHHHHHHHhhchhhhhcCCCcchhH-HHHHHHHHHHHHHHHHHHHHhcchhHHHHHHhh
Q 018749 191 SKGITLNPITSLYYVAPCCLVFLLVPWIFVELPILRETSSFHFDFV-IFGTNSLCAFALNLAVFLLVGKTSALTMNVAGV 269 (351)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~ 269 (351)
+. +.++.....+....+.+.+.+.....+.+.. .+ ...+. .+..+.+.....+..+++++++.++.+.+...+
T Consensus 153 ~~--~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~---~~-~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~s~~~~ 226 (260)
T TIGR00950 153 KE--GPELLQFTGWVLLLGALLLLPFAWFLGPNPQ---AL-SLQWGALLYLGLIGTALAYFLWNKGLTLVDPSAASILAL 226 (260)
T ss_pred cC--CchHHHHHHHHHHHHHHHHHHHHHhcCCCCC---cc-hHHHHHHHHHHHHHHHHHHHHHHHHHhcCCchHHHHHHH
Confidence 32 2223344435566666666555444332211 11 12232 344444445556677789999999999999999
Q ss_pred hhhHHHhhhhHhhcCCccchhhHHHHHHHHHhH
Q 018749 270 VKDWLLIAFSWSVIKDTVTPINLFGYGLAFLGV 302 (351)
Q Consensus 270 l~~v~~~~~~~~~~~e~~s~~~~~G~~li~~g~ 302 (351)
++|+++.+++++++||++++.+++|..+++.|+
T Consensus 227 ~~pv~~~ll~~~~~~E~~~~~~~~G~~li~~g~ 259 (260)
T TIGR00950 227 AEPLVALLLGLLILGETLSLPQLIGGALIIAAV 259 (260)
T ss_pred HHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHhc
Confidence 999999999999999999999999999999986
No 15
>KOG1442 consensus GDP-fucose transporter [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]
Probab=99.91 E-value=1.2e-25 Score=189.51 Aligned_cols=298 Identities=15% Similarity=0.150 Sum_probs=247.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhcccccccccHHHHHHHHHHHHHHHHHHHHHHhcccC------CCCCChhhHhHH
Q 018749 15 ILLSYTYVAIWIFLSFTVIVYNKYILDKKMYNWPFPISLTMIHMSFCATLAFLLIKVFKFVE------PVTMSRDLYFSS 88 (351)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~K~~l~~~~~~~~~p~~~~~~r~~~~~~~l~~~~~~~~~~~------~~~~~~~~~~~~ 88 (351)
....-.....|...++++.+.||++++......+.|.++++.|.+....+|+.+.+..+.-+ ..+++.+. .|.
T Consensus 26 ~~~v~~~vs~ywv~SI~~vf~nk~llss~~~~Ld~plf~t~~qcLvt~~~c~~ls~ls~k~~~~ftfp~~~ldl~t-~r~ 104 (347)
T KOG1442|consen 26 AKQVDSAVSLYWVTSIGLVFLNKHLLSSLVVILDAPLFITWYQCLVTTSICLVLSSLSVKYPGLFTFPSLQLDLAT-ARQ 104 (347)
T ss_pred hhchhhhccceeeeeehhhhhHHHHhhchhhhcCcHHHHHHHHHHHHHHHHHHHHHHHhhccceeccCcccccHHH-HHh
Confidence 44455556788889999999999999866667888999999999999988887765432221 22233333 688
Q ss_pred HHHHHHHHHHHHhhhhhhcccccHHHHHHHHHHHHHHHHHHHHHhccccccchhhHHHHHHHhhhheeeecC---cccch
Q 018749 89 VVPIGALYSLSLWLSNSAYIYLSVSFIQMLKALMPVAVYSIGVTFKKESFKSDTMCNMVSISVGVAIAAYGE---AKFDS 165 (351)
Q Consensus 89 ~~~~~l~~~~~~~~~~~al~~~~~s~~~vi~~~~pi~~~ll~~~~~~e~~~~~~~~~~~l~~~Gv~l~~~~~---~~~~~ 165 (351)
+++.++.+.++..+.|++++|++++.+++-+++..+|+.+++++++|+|-+..-..++.+++.|..+-.-.| ...++
T Consensus 105 vlplsvVfi~mI~fnnlcL~yVgVaFYyvgRsLttvFtVlLtyvllkqkTs~~~~~~C~lIi~GF~lGvdqE~~~~~ls~ 184 (347)
T KOG1442|consen 105 VLPLSVVFILMISFNNLCLKYVGVAFYYVGRSLTTVFTVLLTYVLLKQKTSFFALGCCLLIILGFGLGVDQEGSTGTLSW 184 (347)
T ss_pred hcchhheeeeehhccceehhhcceEEEEeccchhhhHHHHhHHhhcccccccccceeehhheehheeccccccccCccch
Confidence 999999999999999999999999999999999999999999999999999999999999999998877666 45679
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCChHHHHHHHhHHHHHHHHHHHHH-hhchhhhhc-CCC-cchhHHHHHHH
Q 018749 166 WGVVLQLGAVAFEATRLVMIQILLTSKGITLNPITSLYYVAPCCLVFLLVPWIF-VELPILRET-SSF-HFDFVIFGTNS 242 (351)
Q Consensus 166 ~G~~~~l~s~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~-~~~~~~~~~-~~~-~~~~~~~~~~~ 242 (351)
.|.++++.|+++-|+..++.||.... ....-+++.+|+...+++..+|.... .|....... ..+ ...|.++.+++
T Consensus 185 ~GvifGVlaSl~vAlnaiytkk~l~~--v~~~iw~lt~ynnv~a~lLflpll~lnge~~~v~~~~~l~a~~Fw~~mtLsg 262 (347)
T KOG1442|consen 185 IGVIFGVLASLAVALNAIYTKKVLPP--VGDCIWRLTAYNNVNALLLFLPLLILNGEFQAVVGFPHLPAIKFWILMTLSG 262 (347)
T ss_pred hhhHHHHHHHHHHHHHHHhhheeccc--ccCeehhhHHHHHHHHHHHHHHHHHHcchHHHHcCcccchHHHHHHHHHHHH
Confidence 99999999999999999999987543 33456788899999998888777643 332222221 111 23478899999
Q ss_pred HHHHHHHHHHHHHHhcchhHHHHHHhhhhhHHHhhhhHhhcCCccchhhHHHHHHHHHhHhhhhhhhhhhhhH
Q 018749 243 LCAFALNLAVFLLVGKTSALTMNVAGVVKDWLLIAFSWSVIKDTVTPINLFGYGLAFLGVAYYNHSKLQALKA 315 (351)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~s~~~~l~~v~~~~~~~~~~~e~~s~~~~~G~~li~~g~~l~~~~~~~~~~~ 315 (351)
+++|..++...+-+|.++|.++.+....+.+...+++..+++|.-+..-|-|-++++.|...|++.|..++++
T Consensus 263 lfgF~mgyvTg~QIK~TSplThnISgTAka~aQTvlAv~~y~E~ks~lwwtsn~~vLvgs~~YT~vk~~em~~ 335 (347)
T KOG1442|consen 263 LFGFAMGYVTGWQIKVTSPLTHNISGTAKAAAQTVLAVAYYSETKSGLWWTSNIVVLVGSLAYTLVKEHEMRK 335 (347)
T ss_pred HHHHHhhheeeEEEEecccceeeecHhHHHHHHHHHHHHHHHHHhhhheeeeeEEEEehhHHHHHHHHHHHHh
Confidence 9999999999999999999999999999999999999999999999999999999999999999987665543
No 16
>TIGR03340 phn_DUF6 phosphonate utilization associated putative membrane protein. This family of hydrophobic proteins has some homology to families of integral membrane proteins such as (pfam00892) and may be a permease. It occurs in the vicinity of various types of operons for the catabolism of phosphonates in Vibrio, Pseudomonas, Polaromonas and Thiomicrospira.
Probab=99.91 E-value=3e-22 Score=180.32 Aligned_cols=273 Identities=9% Similarity=-0.052 Sum_probs=186.0
Q ss_pred HHHHHHHHHHHHHHHHhhcccccccccHHHHHHHHHHHHHHHHHHHHHHhcccCCCCCChhhHhHHHHHHHHHHHHHHhh
Q 018749 23 AIWIFLSFTVIVYNKYILDKKMYNWPFPISLTMIHMSFCATLAFLLIKVFKFVEPVTMSRDLYFSSVVPIGALYSLSLWL 102 (351)
Q Consensus 23 ~~~~~~~~~~~~~~K~~l~~~~~~~~~p~~~~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 102 (351)
+...++........|...+ +-+ + ..++++....+++.++......++..+.++++.+...+..++.......+
T Consensus 7 ~~aa~~~a~~~~~~k~~~~----~~~-~--~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (281)
T TIGR03340 7 VFSALMHAGWNLMAKSHAD----KEP-D--FLWWALLAHSVLLTPYGLWYLAQVGWSRLPATFWLLLAISAVANMVYFLG 79 (281)
T ss_pred HHHHHHHHHHHHHHhhcCC----chh-H--HHHHHHHHHHHHHHHHHHHhcccCCCCCcchhhHHHHHHHHHHHHHHHHH
Confidence 3444445555667786664 222 3 24777766666666655432111222222233344556667778889999
Q ss_pred hhhhcccccHHHHHHHHHHHHHHHHHHHHHhccccccchhhHHHHHHHhhhheeeecC-cccchhHHHHHHHHHHHHHHH
Q 018749 103 SNSAYIYLSVSFIQMLKALMPVAVYSIGVTFKKESFKSDTMCNMVSISVGVAIAAYGE-AKFDSWGVVLQLGAVAFEATR 181 (351)
Q Consensus 103 ~~~al~~~~~s~~~vi~~~~pi~~~ll~~~~~~e~~~~~~~~~~~l~~~Gv~l~~~~~-~~~~~~G~~~~l~s~~~~a~~ 181 (351)
.+.++++.|++.++.+.++.|+++.+++++++|||++.++|+|+.++++|+.++..++ .+.+..|+.++++++++|+.|
T Consensus 80 ~~~a~~~~~~~~~~~l~~~~p~~~~l~~~~~~~e~~~~~~~~g~~~~~~Gv~ll~~~~~~~~~~~g~~~~l~aal~~a~~ 159 (281)
T TIGR03340 80 LAQAYHHADVGLVYPLARSSPLLVAIWATLTLGETLSPLAWLGILIITLGLLVLGLSRFAQHRRKAYAWALAAALGTAIY 159 (281)
T ss_pred HHHHHhcCChhhhhhHHhhhHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHhcccccccchhHHHHHHHHHHHHHHh
Confidence 9999999999999999999999999999999999999999999999999998766433 224556888999999999999
Q ss_pred HHHHHHHhhcCCCCCChHHHHHHHhHHHHHHHHHHHHHhhchhhhhcCCCcchhHHHHHHHHHHHHHHHHHHHHHhcchh
Q 018749 182 LVMIQILLTSKGITLNPITSLYYVAPCCLVFLLVPWIFVELPILRETSSFHFDFVIFGTNSLCAFALNLAVFLLVGKTSA 261 (351)
Q Consensus 182 ~v~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 261 (351)
.+..|+..++.+...+......+......+...+.....+.... .......+..+..+++.+...+..+++++++.++
T Consensus 160 ~i~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~s~l~~~l~~~al~~~~a 237 (281)
T TIGR03340 160 SLSDKAAALGVPAFYSALGYLGIGFLAMGWPFLLLYLKRHGRSM--FPYARQILPSATLGGLMIGGAYALVLWAMTRLPV 237 (281)
T ss_pred hhhccccccchhcccccHHHHHHHHHHHHHHHHHHHHHHhccch--hhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCc
Confidence 99988763321111111111122221111111111111111110 0011112344566666666677778899999999
Q ss_pred HHHHHHhhhhhHHHhhhhHhhcCCccchhhHHHHHHHHHhHhh
Q 018749 262 LTMNVAGVVKDWLLIAFSWSVIKDTVTPINLFGYGLAFLGVAY 304 (351)
Q Consensus 262 ~~~s~~~~l~~v~~~~~~~~~~~e~~s~~~~~G~~li~~g~~l 304 (351)
...+...+++|++++++|++++||+++..+++|+.+++.|+.+
T Consensus 238 ~~~~~~~~l~pv~a~l~g~~~lgE~~~~~~~iG~~lil~Gv~l 280 (281)
T TIGR03340 238 ATVVALRNTSIVFAVVLGIWFLNERWYLTRLMGVCIIVAGLVV 280 (281)
T ss_pred eEEEeecccHHHHHHHHHHHHhCCCccHHHHHHHHHHHHhHHh
Confidence 9999999999999999999999999999999999999999865
No 17
>TIGR00688 rarD rarD protein. This uncharacterized protein is predicted to have many membrane-spanning domains.
Probab=99.89 E-value=5.9e-21 Score=169.67 Aligned_cols=245 Identities=11% Similarity=0.078 Sum_probs=165.7
Q ss_pred HHHHHHHHHHHHHHHHHHhhcccccccccHHHHHHHHHHHHHHHHHHHHHHhcccC----CC-CCChhhHhHHHHHHHHH
Q 018749 21 YVAIWIFLSFTVIVYNKYILDKKMYNWPFPISLTMIHMSFCATLAFLLIKVFKFVE----PV-TMSRDLYFSSVVPIGAL 95 (351)
Q Consensus 21 ~~~~~~~~~~~~~~~~K~~l~~~~~~~~~p~~~~~~r~~~~~~~l~~~~~~~~~~~----~~-~~~~~~~~~~~~~~~l~ 95 (351)
+.++..+.++......|. .+ +++ |..+.++|++++.+.+.++....++++ +. +.++++........+++
T Consensus 6 ~~i~a~~~wg~~~~~~k~-~~----~~~-~~~i~~~R~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 79 (256)
T TIGR00688 6 VSLLASFLFGYMYYYSKL-LK----PLP-ATDILGHRMIWSFPFMLLSVTLFRQWAALIERLKRIQKRPLILSLLLCGLL 79 (256)
T ss_pred HHHHHHHHHHHHHHHHHH-hc----cCC-HHHHHHHHHHHHHHHHHHHHHHHcchHHHHHHHhCcccchHHHHHHHHHHH
Confidence 344444445556667798 42 587 999999999999877666543233211 11 12222222335566777
Q ss_pred HHHHHhhhhhhcccccHHHHHHHHHHHHHHHHHHHHHhccccccchhhHHHHHHHhhhheeeecCcccchhHHHHHHHHH
Q 018749 96 YSLSLWLSNSAYIYLSVSFIQMLKALMPVAVYSIGVTFKKESFKSDTMCNMVSISVGVAIAAYGEAKFDSWGVVLQLGAV 175 (351)
Q Consensus 96 ~~~~~~~~~~al~~~~~s~~~vi~~~~pi~~~ll~~~~~~e~~~~~~~~~~~l~~~Gv~l~~~~~~~~~~~G~~~~l~s~ 175 (351)
.+.+..+++.|+++++++.++++.++.|+++++++++++|||++++++++++++++|+.++..++.+.+ .++++++
T Consensus 80 ~~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~~~lla~~~l~Ek~~~~~~l~~~~~~~Gv~li~~~~~~~~----~~~l~aa 155 (256)
T TIGR00688 80 IGFNWWLFIWAVNNGSSLEVSLGYLINPLVMVALGRVFLKERISRFQFIAVIIATLGVISNIVLKGSLP----WEALVLA 155 (256)
T ss_pred HHHHHHHHHHHHHcchHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHcCCch----HHHHHHH
Confidence 888999999999999999999999999999999999999999999999999999999987654322222 3578899
Q ss_pred HHHHHHHHHHHHHhhcCCCCCChHHHHHHHhHHHHHHHHHHHHHhhchhhhhcCCCcchhHHHHHHHHHHHHHHHHHHHH
Q 018749 176 AFEATRLVMIQILLTSKGITLNPITSLYYVAPCCLVFLLVPWIFVELPILRETSSFHFDFVIFGTNSLCAFALNLAVFLL 255 (351)
Q Consensus 176 ~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (351)
++||.|.+..|+..++ +..+..... ....+...+.....+.+... ..+....|..++..++.+...+.+++.+
T Consensus 156 ~~~a~~~i~~~~~~~~-----~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~~g~~t~i~~~l~~~a 228 (256)
T TIGR00688 156 FSFTAYGLIRKALKNT-----DLAGFCLET-LSLMPVAIYYLLQTDFATVQ-QTNPFPIWLLLVLAGLITGTPLLAFVIA 228 (256)
T ss_pred HHHHHHHHHHhhcCCC-----CcchHHHHH-HHHHHHHHHHHHHhccCccc-ccCchhHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999987331 222222111 11111111111111111111 1111113444444455566677888899
Q ss_pred HhcchhHHHHHHhhhhhHHHhhhhHhh
Q 018749 256 VGKTSALTMNVAGVVKDWLLIAFSWSV 282 (351)
Q Consensus 256 ~~~~~~~~~s~~~~l~~v~~~~~~~~~ 282 (351)
+++.++.+.+.+.+++|+++++++.+.
T Consensus 229 ~~~~~a~~~s~~~yl~Pv~~~~~~~~~ 255 (256)
T TIGR00688 229 ANRLPLNLLGLLQYIGPTIMMLCVSFL 255 (256)
T ss_pred HHcCChHHHHHHHHHHHHHHHHHHHHh
Confidence 999999999999999999999999764
No 18
>COG0697 RhaT Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only]
Probab=99.88 E-value=1.6e-19 Score=163.07 Aligned_cols=274 Identities=15% Similarity=0.153 Sum_probs=192.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhcccccccccHHHHHHHHHHHHHHHHHHHHHHhcccCCCCCChhhHhHHHHHHHHHHHH
Q 018749 19 YTYVAIWIFLSFTVIVYNKYILDKKMYNWPFPISLTMIHMSFCATLAFLLIKVFKFVEPVTMSRDLYFSSVVPIGALYSL 98 (351)
Q Consensus 19 ~~~~~~~~~~~~~~~~~~K~~l~~~~~~~~~p~~~~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 98 (351)
....+++...+.......|...+ ...+ +....+.|+..+......... .+..++.+..++ ..+..+..++....
T Consensus 9 ~~~~l~~~~~~~~~~~~~~~~~~---~~~~-~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~-~~~~~~~~~~~~~~ 82 (292)
T COG0697 9 LLALLLWGLLWGLSFIALKLAVE---SLDP-FLFAAALRFLIAALLLLPLLL-LEPRGLRPALRP-WLLLLLLALLGLAL 82 (292)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhc---ccCC-hHHHHHHHHHHHHHHHHHHHH-hhcccccccccc-hHHHHHHHHHHHHH
Confidence 33344444444445556677773 2233 666777799888777333332 111111122111 23456666777889
Q ss_pred HHhhhhhhcccccHHHHHHHHHHHHHHHHHHHH-HhccccccchhhHHHHHHHhhhheeeecCcccc---hhHHHHHHHH
Q 018749 99 SLWLSNSAYIYLSVSFIQMLKALMPVAVYSIGV-TFKKESFKSDTMCNMVSISVGVAIAAYGEAKFD---SWGVVLQLGA 174 (351)
Q Consensus 99 ~~~~~~~al~~~~~s~~~vi~~~~pi~~~ll~~-~~~~e~~~~~~~~~~~l~~~Gv~l~~~~~~~~~---~~G~~~~l~s 174 (351)
...+++.++++++++.++++.++.|+++.+++. +++|||++++++.++.+.++|+.++...+...+ ..|+.+++.+
T Consensus 83 ~~~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~~~~~e~~~~~~~~~~~~~~~Gv~lv~~~~~~~~~~~~~g~~~~l~a 162 (292)
T COG0697 83 PFLLLFLALKYTSASVASLIIGLLPLFTALLAVLLLLGERLSLLQILGILLALAGVLLILLGGGGGGILSLLGLLLALAA 162 (292)
T ss_pred HHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHccCCCcHHHHHHHHHHHHhHHheecCCCcchhHHHHHHHHHHHH
Confidence 999999999999999999999999999999997 777999999999999999999999988765443 5899999999
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCChHHHHH-HHhHHHHHHHHHHHHHhhchhhhhcCCCcchhHHHHHHHHHHH-HHHHHH
Q 018749 175 VAFEATRLVMIQILLTSKGITLNPITSLY-YVAPCCLVFLLVPWIFVELPILRETSSFHFDFVIFGTNSLCAF-ALNLAV 252 (351)
Q Consensus 175 ~~~~a~~~v~~~~~~~~~~~~~~~~~~~~-~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 252 (351)
+++++++.+..|+.. +.++..... +... ............+.+ .......+..+...++.+. ..+..+
T Consensus 163 ~~~~a~~~~~~~~~~-----~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~g~~~~~i~~~~~ 232 (292)
T COG0697 163 ALLWALYTALVKRLS-----RLGPVTLALLLQLL-LALLLLLLFFLSGFG----APILSRAWLLLLYLGVFSTGLAYLLW 232 (292)
T ss_pred HHHHHHHHHHHHHhc-----CCChHHHHHHHHHH-HHHHHHHHHHhcccc----ccCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999985 124444443 2322 111111111111111 1111112333333444444 456777
Q ss_pred HHHHhcchhHHHHHHhhhhhHHHhhhhHhhcCCccchhhHHHHHHHHHhHhhhhhh
Q 018749 253 FLLVGKTSALTMNVAGVVKDWLLIAFSWSVIKDTVTPINLFGYGLAFLGVAYYNHS 308 (351)
Q Consensus 253 ~~~~~~~~~~~~s~~~~l~~v~~~~~~~~~~~e~~s~~~~~G~~li~~g~~l~~~~ 308 (351)
+..+++.++...+....++|+.+.+++++++||+++..+++|+.+++.|+.+....
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~v~~~~~~~l~~~e~~~~~~~~G~~li~~g~~l~~~~ 288 (292)
T COG0697 233 YYALRLLGASLVALLSLLEPVFAALLGVLLLGEPLSPAQLLGAALVVLGVLLASLR 288 (292)
T ss_pred HHHHHhcCchHHHHHHHHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHhcc
Confidence 88999999999999999999999999999999999999999999999999987654
No 19
>COG5070 VRG4 Nucleotide-sugar transporter [Carbohydrate transport and metabolism / Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion]
Probab=99.88 E-value=2.9e-21 Score=158.37 Aligned_cols=282 Identities=17% Similarity=0.237 Sum_probs=232.2
Q ss_pred HHHHHHHHHHHHHHHHHHHhhcccccccccHHHHHHHHHHHHHHHHHHHHHHhcccCCCCCChhhHhHHHHHHHHHHHHH
Q 018749 20 TYVAIWIFLSFTVIVYNKYILDKKMYNWPFPISLTMIHMSFCATLAFLLIKVFKFVEPVTMSRDLYFSSVVPIGALYSLS 99 (351)
Q Consensus 20 ~~~~~~~~~~~~~~~~~K~~l~~~~~~~~~p~~~~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 99 (351)
.....|+++|+.+++.||++++ ..+|+.-+.+.+.|.+.+.+.+.++-+ .|..+-+ .++ .+.+++.+++...+
T Consensus 9 ~~~lsYc~sSIlmTltNKyVls--~~gfnMnflll~vQSlvcvv~l~iLk~-l~~~~fR---~t~-aK~WfpiSfLLv~M 81 (309)
T COG5070 9 TASLSYCFSSILMTLTNKYVLS--NLGFNMNFLLLAVQSLVCVVGLLILKF-LRLVEFR---LTK-AKKWFPISFLLVVM 81 (309)
T ss_pred hHHHHHHHHHHHHHHhhHheec--CCCCchhhHHHHHHHHHHHHHHHHHHH-HhHhhee---hhh-hhhhcCHHHHHHHH
Confidence 3457889999999999999997 455666688999999988877666543 3332222 222 46688899999999
Q ss_pred HhhhhhhcccccHHHHHHHHHHHHHHHHHHHHHhccccccchhhHHHHHHHhhhheeeecCcc--------cchhHHHHH
Q 018749 100 LWLSNSAYIYLSVSFIQMLKALMPVAVYSIGVTFKKESFKSDTMCNMVSISVGVAIAAYGEAK--------FDSWGVVLQ 171 (351)
Q Consensus 100 ~~~~~~al~~~~~s~~~vi~~~~pi~~~ll~~~~~~e~~~~~~~~~~~l~~~Gv~l~~~~~~~--------~~~~G~~~~ 171 (351)
......++||.+++.++++++++.+.++..+.+++|.|.+..+..+.++.+..-....++|.+ .| -|++|+
T Consensus 82 Iyt~SKsLqyL~vpiYTiFKNltII~iAygEvl~Fgg~vtsl~l~SFilMvlSS~va~w~D~q~~~~~~~~lN-~GY~Wm 160 (309)
T COG5070 82 IYTSSKSLQYLAVPIYTIFKNLTIILIAYGEVLFFGGRVTSLELLSFILMVLSSVVATWGDQQASAFKAQILN-PGYLWM 160 (309)
T ss_pred HHhcccceeeeeeeHHHHhccceeehhHhhHHHHhcCccchhhHHHHHHHHHHHHHhccchhhHHHHHhcccC-CceEEE
Confidence 999999999999999999999999999999999999999999999999999999888888763 33 499999
Q ss_pred HHHHHHHHHHHHHHHHHhhcCCCCCChHHHHHHHhHHHHHHHHHHHHHhhchhhhhc-CCCcc-hhHHHHHHHHHHHHHH
Q 018749 172 LGAVAFEATRLVMIQILLTSKGITLNPITSLYYVAPCCLVFLLVPWIFVELPILRET-SSFHF-DFVIFGTNSLCAFALN 249 (351)
Q Consensus 172 l~s~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~-~~~~~-~~~~~~~~~~~~~~~~ 249 (351)
....+..+.+-...||-.+-. +....+.++|..+.+..+++......|.....+. ..... .+..+..+++++++..
T Consensus 161 ~~NclssaafVL~mrkri~lt--Nf~d~dtmfYnNllslPiL~~~s~~~edws~~n~annl~~d~l~am~ISgl~svgiS 238 (309)
T COG5070 161 FTNCLSSAAFVLIMRKRIKLT--NFKDFDTMFYNNLLSLPILLSFSFLFEDWSPGNLANNLSVDSLMAMFISGLCSVGIS 238 (309)
T ss_pred ehhhHhHHHHHHHHHHhhccc--ccchhhHHHHhhhHHHHHHHHHHHHhccCCcchhhcCCChHHHHHHHHHHHHHhhhh
Confidence 999999999888888765422 3456678999999999999888877765432211 12222 2456788999999999
Q ss_pred HHHHHHHhcchhHHHHHHhhhhhHHHhhhhHhhcCCccchhhHHHHHHHHHhHhhhhhhhhh
Q 018749 250 LAVFLLVGKTSALTMNVAGVVKDWLLIAFSWSVIKDTVTPINLFGYGLAFLGVAYYNHSKLQ 311 (351)
Q Consensus 250 ~~~~~~~~~~~~~~~s~~~~l~~v~~~~~~~~~~~e~~s~~~~~G~~li~~g~~l~~~~~~~ 311 (351)
++.-|+++.+++++.++.+.++.....+-|.++|||+.+...+..+.+=.++..+|...+.+
T Consensus 239 y~saWcvrVtSSTtySMvGALNKlp~alaGlvffdap~nf~si~sillGflsg~iYavaks~ 300 (309)
T COG5070 239 YCSAWCVRVTSSTTYSMVGALNKLPIALAGLVFFDAPVNFLSIFSILLGFLSGAIYAVAKSK 300 (309)
T ss_pred hccceeEeehhhhHHHHHHHhhhChHHHhhhhhcCCchhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999988888888877654
No 20
>COG5006 rhtA Threonine/homoserine efflux transporter [Amino acid transport and metabolism]
Probab=99.86 E-value=1.1e-19 Score=152.26 Aligned_cols=250 Identities=14% Similarity=0.044 Sum_probs=190.3
Q ss_pred HHHHhhcccccccccHHHHHHHHHHHHHHHHHHHHHHhcccCCCCCChhhHhHHHHHHHHHHHHHHhhhhhhcccccHHH
Q 018749 35 YNKYILDKKMYNWPFPISLTMIHMSFCATLAFLLIKVFKFVEPVTMSRDLYFSSVVPIGALYSLSLWLSNSAYIYLSVSF 114 (351)
Q Consensus 35 ~~K~~l~~~~~~~~~p~~~~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~al~~~~~s~ 114 (351)
+.|.++ ..+. |.-.+.+|..++.+++..++|-. +.+..+++ ++..+..|...+.+|.++|.+++.+|.+.
T Consensus 30 ~Ak~LF----P~vG-~~g~t~lRl~~aaLIll~l~RPw----r~r~~~~~-~~~~~~yGvsLg~MNl~FY~si~riPlGi 99 (292)
T COG5006 30 FAKSLF----PLVG-AAGVTALRLAIAALILLALFRPW----RRRLSKPQ-RLALLAYGVSLGGMNLLFYLSIERIPLGI 99 (292)
T ss_pred HHHHHc----cccC-hhhHHHHHHHHHHHHHHHHhhHH----HhccChhh-hHHHHHHHHHHHHHHHHHHHHHHhccchh
Confidence 457787 3666 89999999999999988877632 34455555 46788999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHhccccccchhhHHHHHHHhhhheeeecC---cccchhHHHHHHHHHHHHHHHHHHHHHHhhc
Q 018749 115 IQMLKALMPVAVYSIGVTFKKESFKSDTMCNMVSISVGVAIAAYGE---AKFDSWGVVLQLGAVAFEATRLVMIQILLTS 191 (351)
Q Consensus 115 ~~vi~~~~pi~~~ll~~~~~~e~~~~~~~~~~~l~~~Gv~l~~~~~---~~~~~~G~~~~l~s~~~~a~~~v~~~~~~~~ 191 (351)
+..+.++-|+.+.+++ .+| .++.+.+.+.+.|+.+..-.. .+.|..|..+++.+..||+.|.+..||.-+
T Consensus 100 AVAiEF~GPL~vA~~~----sRr--~~d~vwvaLAvlGi~lL~p~~~~~~~lDp~Gv~~Al~AG~~Wa~YIv~G~r~g~- 172 (292)
T COG5006 100 AVAIEFTGPLAVALLS----SRR--LRDFVWVALAVLGIWLLLPLGQSVWSLDPVGVALALGAGACWALYIVLGQRAGR- 172 (292)
T ss_pred hhhhhhccHHHHHHHh----ccc--hhhHHHHHHHHHHHHhheeccCCcCcCCHHHHHHHHHHhHHHHHHHHHcchhcc-
Confidence 9999999999888754 444 456666777788877655433 456889999999999999999999999854
Q ss_pred CCCCCChHHHHHHHhHHHHHHHHHHHHHhhchhhhhcCCCcchhHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHhhhh
Q 018749 192 KGITLNPITSLYYVAPCCLVFLLVPWIFVELPILRETSSFHFDFVIFGTNSLCAFALNLAVFLLVGKTSALTMNVAGVVK 271 (351)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~l~ 271 (351)
..+....+...+..+.++.+|......++.+.. +......+..+.+.+..-+..-...+++.++.++++...++
T Consensus 173 ---~~~g~~g~a~gm~vAaviv~Pig~~~ag~~l~~---p~ll~laLgvavlSSalPYsLEmiAL~rlp~~~F~~LlSLe 246 (292)
T COG5006 173 ---AEHGTAGVAVGMLVAALIVLPIGAAQAGPALFS---PSLLPLALGVAVLSSALPYSLEMIALRRLPARTFGTLLSLE 246 (292)
T ss_pred ---cCCCchHHHHHHHHHHHHHhhhhhhhcchhhcC---hHHHHHHHHHHHHhcccchHHHHHHHhhCChhHHHHHHHhh
Confidence 235556677778888888777765443333322 12111222222333333344455679999999999999999
Q ss_pred hHHHhhhhHhhcCCccchhhHHHHHHHHHhHhhhhh
Q 018749 272 DWLLIAFSWSVIKDTVTPINLFGYGLAFLGVAYYNH 307 (351)
Q Consensus 272 ~v~~~~~~~~~~~e~~s~~~~~G~~li~~g~~l~~~ 307 (351)
|.++.+.|++++||++|+.||+|+..++.+..-.+.
T Consensus 247 Pa~aAl~G~i~L~e~ls~~qwlaI~~ViaAsaG~~l 282 (292)
T COG5006 247 PALAALSGLIFLGETLTLIQWLAIAAVIAASAGSTL 282 (292)
T ss_pred HHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHhcccc
Confidence 999999999999999999999999999998775444
No 21
>KOG1580 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]
Probab=99.86 E-value=3.5e-21 Score=159.20 Aligned_cols=255 Identities=18% Similarity=0.233 Sum_probs=203.0
Q ss_pred cccccHHHHHHHHHHHHHHHHHHHHHHhcccCCCCCChhhHhHHHHHHHHHHHHHHhhhhhhcccccHHHHHHHHHHHHH
Q 018749 45 YNWPFPISLTMIHMSFCATLAFLLIKVFKFVEPVTMSRDLYFSSVVPIGALYSLSLWLSNSAYIYLSVSFIQMLKALMPV 124 (351)
Q Consensus 45 ~~~~~p~~~~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~al~~~~~s~~~vi~~~~pi 124 (351)
++|++...+.|.|+....+..-++... ++..+..+.. -+.....++.|-+.+...|-|+||+|.++..+-+++.||
T Consensus 48 E~FTfalaLVf~qC~~N~vfAkvl~~i---r~~~~~D~t~-~~~YaAcs~sYLlAMVssN~Alq~vpYPTqVlgKScKPI 123 (337)
T KOG1580|consen 48 EKFTFALALVFFQCTANTVFAKVLFLI---RKKTEIDNTP-TKMYAACSASYLLAMVSSNQALQYVPYPTQVLGKSCKPI 123 (337)
T ss_pred heehHHHHHHHHHHHHHHHHHHhheee---cccccccCCc-chHHHHHHHHHHHHHHhccchhcccCCcHHHhcccCCCc
Confidence 358889999999999888776555432 2222222211 355777888999999999999999999999999999999
Q ss_pred HHHHHHHHhccccccchhhHHHHHHHhhhheeeecCc-------ccchhHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCC
Q 018749 125 AVYSIGVTFKKESFKSDTMCNMVSISVGVAIAAYGEA-------KFDSWGVVLQLGAVAFEATRLVMIQILLTSKGITLN 197 (351)
Q Consensus 125 ~~~ll~~~~~~e~~~~~~~~~~~l~~~Gv~l~~~~~~-------~~~~~G~~~~l~s~~~~a~~~v~~~~~~~~~~~~~~ 197 (351)
.++++++++.+++++|+++.+++.+++|+++...++. +....|-++.++|--..++....++++.. .+..+
T Consensus 124 PVMilGVl~~~KsY~w~kY~cVL~IV~GValFmYK~~Kv~g~e~~t~g~GElLL~lSL~mDGlTg~~Qdrira--~yq~~ 201 (337)
T KOG1580|consen 124 PVMILGVLFAHKSYHWRKYCCVLMIVVGVALFMYKENKVGGAEDKTFGFGELLLILSLAMDGLTGSIQDRIRA--SYQRT 201 (337)
T ss_pred ceeeeehhhhcccccHHHHHHHHHHHHHHHHhhccccccCCCcccccchHHHHHHHHHHhcccchhHHHHHHH--hhccC
Confidence 9999999999999999999999999999999887642 22357999999999999999999999844 33456
Q ss_pred hHHHHHHHhHHHHHHHHHHHHH-hhchhhhhc-CCCcchhHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHhhhhhHHH
Q 018749 198 PITSLYYVAPCCLVFLLVPWIF-VELPILRET-SSFHFDFVIFGTNSLCAFALNLAVFLLVGKTSALTMNVAGVVKDWLL 275 (351)
Q Consensus 198 ~~~~~~~~~~~~~i~~~~~~~~-~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~l~~v~~ 275 (351)
..+++.+..+.+.+.+....++ .|...+... ......++-+.+-++.+.+.+.+.+..+...+|.+.|+....+..++
T Consensus 202 g~~MM~~~NlwStL~Lg~g~lfTGElweF~yF~~RhP~~~~~l~l~ai~s~LGQ~fIF~tv~~FgPLtCSivTTTRKfFT 281 (337)
T KOG1580|consen 202 GTSMMFYTNLWSTLYLGAGLLFTGELWEFFYFVQRHPYVFWDLTLLAIASCLGQWFIFKTVEEFGPLTCSIVTTTRKFFT 281 (337)
T ss_pred chhhHHHHHHHHHHHhhhhheehhhHHHHHHHHHhccHHHHHHHHHHHHHHhhhHHHHHHHHHhCCeeEEEEeehHHHHH
Confidence 7788899999888877655543 232222211 12223345556666777777888899999999999999999999999
Q ss_pred hhhhHhhcCCccchhhHHHHHHHHHhHhhh
Q 018749 276 IAFSWSVIKDTVTPINLFGYGLAFLGVAYY 305 (351)
Q Consensus 276 ~~~~~~~~~e~~s~~~~~G~~li~~g~~l~ 305 (351)
++.|+++|+++++..||+|.++++.|+..-
T Consensus 282 il~SVllf~npls~rQwlgtvlVF~aL~~D 311 (337)
T KOG1580|consen 282 ILISVLLFNNPLSGRQWLGTVLVFSALTAD 311 (337)
T ss_pred HHHHHHHhcCcCcHHHHHHHHHHHHHhhhH
Confidence 999999999999999999999999998763
No 22
>KOG1581 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]
Probab=99.85 E-value=1.1e-18 Score=150.15 Aligned_cols=277 Identities=16% Similarity=0.133 Sum_probs=215.1
Q ss_pred HHHHHHHHHHHHhhc----ccccccccHHHHHHHHHHHHHHHHHHHHHHhcccCCCCCChhhHhHHHHHHHHHHHHHHhh
Q 018749 27 FLSFTVIVYNKYILD----KKMYNWPFPISLTMIHMSFCATLAFLLIKVFKFVEPVTMSRDLYFSSVVPIGALYSLSLWL 102 (351)
Q Consensus 27 ~~~~~~~~~~K~~l~----~~~~~~~~p~~~~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 102 (351)
...+...+++.-+.+ .++.+|.+|.++.+.|-+.+.++......+.+.. ...++. ++....+++....+..+
T Consensus 24 ~t~l~~gVlQEki~T~~y~~~~~rF~~~~fL~~~q~l~~~~~s~~~l~~~k~~---~~~~ap-l~~y~~is~tn~~s~~~ 99 (327)
T KOG1581|consen 24 ATFLTWGVLQEKIMTRPYGEDGERFEHSLFLVFCQRLVALLVSYAMLKWWKKE---LSGVAP-LYKYSLISFTNTLSSWC 99 (327)
T ss_pred HHHHHHHHHhcceeecccCcccccccccHHHHHHHHHHHHHHHHHHHhccccc---CCCCCc-hhHHhHHHHHhhcchHH
Confidence 334555555544432 1234688899999999999988876655433222 222222 46677889999999999
Q ss_pred hhhhcccccHHHHHHHHHHHHHHHHHHHHHhccccccchhhHHHHHHHhhhheeeecC---------cccchhHHHHHHH
Q 018749 103 SNSAYIYLSVSFIQMLKALMPVAVYSIGVTFKKESFKSDTMCNMVSISVGVAIAAYGE---------AKFDSWGVVLQLG 173 (351)
Q Consensus 103 ~~~al~~~~~s~~~vi~~~~pi~~~ll~~~~~~e~~~~~~~~~~~l~~~Gv~l~~~~~---------~~~~~~G~~~~l~ 173 (351)
.+.|++|++.++..+-+++..+.+++++.++.|+|++..++++..++..|+.+....+ .+.+.+|+.++..
T Consensus 100 ~yeaLKyvSyPtq~LaKscKmIPVmlmg~Lvy~~ky~~~eYl~~~LIs~GvsiF~l~~~s~s~~~~g~~ns~~G~~Ll~~ 179 (327)
T KOG1581|consen 100 GYEALKYVSYPTQTLAKSCKMIPVMLMGTLVYGRKYSSFEYLVAFLISLGVSIFSLFPNSDSSSKSGRENSPIGILLLFG 179 (327)
T ss_pred HHHHHHhccchHHHHHHHhhhhHHHHHHHHHhcCccCcHHHHHHHHHHhheeeEEEecCCCCccccCCCCchHhHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999876532 1245899999999
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCCChHHHHHHHhHHHHHHHHHHHHHhhc--hhhhhcCCCcchhHHHHHHHHHHHHHHHH
Q 018749 174 AVAFEATRLVMIQILLTSKGITLNPITSLYYVAPCCLVFLLVPWIFVEL--PILRETSSFHFDFVIFGTNSLCAFALNLA 251 (351)
Q Consensus 174 s~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (351)
+-++.++.+..+.++.++ .+.++.+++++..+..++.-.......+. +.+..-......+.-+.+.++++...|.+
T Consensus 180 ~L~fDgfTn~tQd~lf~~--~k~s~~~mM~~vNLf~~i~~~~~li~qg~~~~av~F~~~hp~~~~Di~l~s~~gavGQ~F 257 (327)
T KOG1581|consen 180 YLLFDGFTNATQDSLFKK--YKVSSLHMMFGVNLFSAILNGTYLILQGHLLPAVSFIKEHPDVAFDILLYSTCGAVGQLF 257 (327)
T ss_pred HHHHHhhHHhHHHHHhcc--CCccHhHHHHHHHHHHHHHHHHhhhcCCCCchHHHHHHcChhHHHHHHHHHHhhhhhhhe
Confidence 999999999999999884 47799999999999888766544221111 11111111122244466667777777888
Q ss_pred HHHHHhcchhHHHHHHhhhhhHHHhhhhHhhcCCccchhhHHHHHHHHHhHhhhhhhh
Q 018749 252 VFLLVGKTSALTMNVAGVVKDWLLIAFSWSVIKDTVTPINLFGYGLAFLGVAYYNHSK 309 (351)
Q Consensus 252 ~~~~~~~~~~~~~s~~~~l~~v~~~~~~~~~~~e~~s~~~~~G~~li~~g~~l~~~~~ 309 (351)
.+..+++.+|.+...++..|.++++.++.+.||++++..||+|..+++.|+.+-.+.+
T Consensus 258 I~~TI~~FGslt~t~I~ttRk~~si~lS~i~f~h~~s~~q~~g~~iVFg~i~l~~~~k 315 (327)
T KOG1581|consen 258 IFYTIERFGSLTFTTIMTTRKMVSIMLSCIVFGHPLSSEQWLGVLIVFGGIFLEILLK 315 (327)
T ss_pred ehhhHhhcccHHHHHHHHHHHHHHHHHHHHHhCCccchhhccCeeeehHHHHHHHHHH
Confidence 8999999999999999999999999999999999999999999999999988754443
No 23
>KOG1582 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]
Probab=99.83 E-value=5e-19 Score=149.44 Aligned_cols=280 Identities=16% Similarity=0.177 Sum_probs=222.1
Q ss_pred HHHHHHHHHHHHHHHHHHHhhcccccccc-cHHHHHHHHHHHHHHHHHHHHHHhcccCCCCCChhhHhHHHHHHHHHHHH
Q 018749 20 TYVAIWIFLSFTVIVYNKYILDKKMYNWP-FPISLTMIHMSFCATLAFLLIKVFKFVEPVTMSRDLYFSSVVPIGALYSL 98 (351)
Q Consensus 20 ~~~~~~~~~~~~~~~~~K~~l~~~~~~~~-~p~~~~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 98 (351)
.-+....+........+.++++ ..+|. +-|.+++.|+++-....++..... ..++...||| ....++.+..+
T Consensus 46 ic~~g~Ff~Yl~yGy~qElif~--~~gfkp~GWylTlvQf~~Ysg~glie~~~~-~~k~r~iP~r----tY~~la~~t~g 118 (367)
T KOG1582|consen 46 ICSAGVFFLYLVYGYLQELIFN--VEGFKPFGWYLTLVQFLVYSGFGLIELQLI-QTKRRVIPWR----TYVILAFLTVG 118 (367)
T ss_pred HHHhHHHHHHHHHHHHHHHHhc--cccCcccchHHHHHHHHHHHhhhheEEEee-cccceecchh----HhhhhHhhhhh
Confidence 3334445555666778888886 56777 789999999986654443332211 1234556664 45556777788
Q ss_pred HHhhhhhhcccccHHHHHHHHHHHHHHHHHHHHHhccccccchhhHHHHHHHhhhheeeecC----cccchhHHHHHHHH
Q 018749 99 SLWLSNSAYIYLSVSFIQMLKALMPVAVYSIGVTFKKESFKSDTMCNMVSISVGVAIAAYGE----AKFDSWGVVLQLGA 174 (351)
Q Consensus 99 ~~~~~~~al~~~~~s~~~vi~~~~pi~~~ll~~~~~~e~~~~~~~~~~~l~~~Gv~l~~~~~----~~~~~~G~~~~l~s 174 (351)
.+.+.|-++.|.+.+...+++++..+.+++.+.++-++|+++.++.+..+...|+++....| +++|..|+.+.-++
T Consensus 119 tmGLsn~SlgYLNYPtQviFKccKliPVmiggifIqGkRY~v~d~~aA~lm~lGli~FTLADs~~sPNF~~~Gv~mIsgA 198 (367)
T KOG1582|consen 119 TMGLSNGSLGYLNYPTQVIFKCCKLIPVMIGGIFIQGKRYGVHDYIAAMLMSLGLIWFTLADSQTSPNFNLIGVMMISGA 198 (367)
T ss_pred ccccCcCccccccCcHHHHHHhhhhhhhhheeeeeccccccHHHHHHHHHHHHHHHhhhhcccccCCCcceeeHHHHHHH
Confidence 89999999999999999999999999999999999999999999999999999999988765 56789999999999
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCChHHHHHHHhHHHHHHHHHHHHHhhchhhh----hcCCCcchhHHHHHHHHHHHHHHH
Q 018749 175 VAFEATRLVMIQILLTSKGITLNPITSLYYVAPCCLVFLLVPWIFVELPILR----ETSSFHFDFVIFGTNSLCAFALNL 250 (351)
Q Consensus 175 ~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~ 250 (351)
-++.|.-..+++|.++..+. +..++++|...++.+.++.+.......... ..+++. .....+.-.+.+++...
T Consensus 199 Ll~DA~iGNvQEk~m~~~~~--ss~EmvfySy~iG~vflf~~mvlTge~f~a~~fcaehp~~-tyGy~~~~s~~gylG~~ 275 (367)
T KOG1582|consen 199 LLADAVIGNVQEKAMKMNPA--SSSEMVFYSYGIGFVFLFAPMVLTGELFSAWTFCAEHPVR-TYGYAFLFSLAGYLGIV 275 (367)
T ss_pred HHHHHHhhHHHHHHHhhCCC--CcceEEEeeecccHHHHHHHHHhcccchhhhHHHHhCcHh-HHHHHHHHHHHhHhhHH
Confidence 99999999999999987543 567888888888988887765443221111 112221 24555566677777777
Q ss_pred HHHHHHhcchhHHHHHHhhhhhHHHhhhhHhhcCCccchhhHHHHHHHHHhHhhhhhhh
Q 018749 251 AVFLLVGKTSALTMNVAGVVKDWLLIAFSWSVIKDTVTPINLFGYGLAFLGVAYYNHSK 309 (351)
Q Consensus 251 ~~~~~~~~~~~~~~s~~~~l~~v~~~~~~~~~~~e~~s~~~~~G~~li~~g~~l~~~~~ 309 (351)
+...+++..++..+....+.+..+++++|+++|..|+|....-|..+++.|+++..+++
T Consensus 276 ~VLalI~~fGA~~aatvTTaRKavTi~lSfllFsKPfT~qy~~~gllv~lgI~Ln~ysk 334 (367)
T KOG1582|consen 276 FVLALIKLFGALIAATVTTARKAVTILLSFLLFSKPFTEQYVWSGLLVVLGIYLNMYSK 334 (367)
T ss_pred HHHHHHHHhchhHHHHHHHhHhHHHHHHHHHHHcCchHHHHhhhhHHHHHHHHhhcccC
Confidence 77889999999999999999999999999999999999999999999999999987776
No 24
>KOG2765 consensus Predicted membrane protein [Function unknown]
Probab=99.83 E-value=9.5e-19 Score=154.47 Aligned_cols=224 Identities=17% Similarity=0.126 Sum_probs=181.8
Q ss_pred HHHHHHHHHHHHHhhhhhhcccccHHHHHHHHHHHHHHHHHHHHHhccccccchhhHHHHHHHhhhheeeecCc------
Q 018749 88 SVVPIGALYSLSLWLSNSAYIYLSVSFIQMLKALMPVAVYSIGVTFKKESFKSDTMCNMVSISVGVAIAAYGEA------ 161 (351)
Q Consensus 88 ~~~~~~l~~~~~~~~~~~al~~~~~s~~~vi~~~~pi~~~ll~~~~~~e~~~~~~~~~~~l~~~Gv~l~~~~~~------ 161 (351)
.-+....+.+..++.+|.|+.|++++..+++.+++-+|+.+++.++..||+++.+.+++.+.++|++++..++.
T Consensus 161 ~sl~fc~lWF~anl~~naALa~TsVAS~TilSStSs~FtL~la~if~~e~ft~sKllav~~si~GViiVt~~~s~~~~~~ 240 (416)
T KOG2765|consen 161 LSLFFCPLWFLANLTSNAALAFTSVASTTILSSTSSFFTLFLAAIFPVERFTLSKLLAVFVSIAGVIIVTMGDSKQNSDL 240 (416)
T ss_pred HHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhhhcchHHHHHHHHHcCcchhhHHHHHHHHHhhccEEEEEeccccccccC
Confidence 33444555678888999999999999999999999999999999999999999999999999999999998742
Q ss_pred --ccchhHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCChHHHHHHHhHHHHHHHHHHHHHhhchhhh--hcCCCcchhHH
Q 018749 162 --KFDSWGVVLQLGAVAFEATRLVMIQILLTSKGITLNPITSLYYVAPCCLVFLLVPWIFVELPILR--ETSSFHFDFVI 237 (351)
Q Consensus 162 --~~~~~G~~~~l~s~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~--~~~~~~~~~~~ 237 (351)
+-..+|.++++.+|+.||+|.++.||-..+++.+.|-.....+..++..+.+.|+....+..... +.........+
T Consensus 241 ~a~~~llG~llaL~sA~~YavY~vllk~~~~~eg~rvdi~lffGfvGLfnllllwP~l~iL~~~~~e~F~lP~~~q~~~v 320 (416)
T KOG2765|consen 241 PASRPLLGNLLALLSALLYAVYTVLLKRKIGDEGERVDIQLFFGFVGLFNLLLLWPPLIILDFFGEERFELPSSTQFSLV 320 (416)
T ss_pred CccchhHHHHHHHHHHHHHHHHHHHHHhhcccccccccHHHHHHHHHHHHHHHHhHHHHHHHHhccCcccCCCCceeEee
Confidence 22378999999999999999999999877665688888888888888888888776544322111 11111111233
Q ss_pred HHHHHHHHHHHHHHHHHHHhcchhHHHHHHhhhhhHHHhhhhHhhcCCccchhhHHHHHHHHHhHhhhhhhhhh
Q 018749 238 FGTNSLCAFALNLAVFLLVGKTSALTMNVAGVVKDWLLIAFSWSVIKDTVTPINLFGYGLAFLGVAYYNHSKLQ 311 (351)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~l~~v~~~~~~~~~~~e~~s~~~~~G~~li~~g~~l~~~~~~~ 311 (351)
++.+.+..+..-+++.++.-.++|+...+...+...++.+...++-+.++|+.+++|...+++|....++..+.
T Consensus 321 v~~~ligtvvSDylW~~a~~lTs~Lv~TlgmSltIPLA~~aD~l~k~~~~S~~~iiGsi~Ifv~Fv~vn~~~~~ 394 (416)
T KOG2765|consen 321 VFNNLIGTVVSDYLWAKAVLLTSPLVVTLGMSLTIPLAMFADVLIKGKHPSALYIIGSIPIFVGFVIVNISSEN 394 (416)
T ss_pred eHhhHHHHHHHHHHHHHHHHhccchhheeeeeEeeeHHHHHHHHHcCCCCCHHHHHHHHHHHHHHhheeccccc
Confidence 44445555555688888999999999999999999999999999999999999999999999999998876543
No 25
>COG2962 RarD Predicted permeases [General function prediction only]
Probab=99.81 E-value=3.7e-17 Score=140.84 Aligned_cols=275 Identities=12% Similarity=0.086 Sum_probs=199.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhcccccccccHHHHHHHHHHHHHHHHHHHHHHhcccC---CCCCChhhHhHHHHHHHHH
Q 018749 19 YTYVAIWIFLSFTVIVYNKYILDKKMYNWPFPISLTMIHMSFCATLAFLLIKVFKFVE---PVTMSRDLYFSSVVPIGAL 95 (351)
Q Consensus 19 ~~~~~~~~~~~~~~~~~~K~~l~~~~~~~~~p~~~~~~r~~~~~~~l~~~~~~~~~~~---~~~~~~~~~~~~~~~~~l~ 95 (351)
..+.+..++.++.+.+.-|.+. ..+ +..+...|.+-..+.+..+....|+.+ ....+++. +-.+...++.
T Consensus 9 il~~l~Ay~lwG~lp~y~kll~-----~~~-~~eIlahRviwS~~~~l~ll~~~r~~~~~~~~~~~p~~-~~~~~l~a~l 81 (293)
T COG2962 9 ILLALLAYLLWGLLPLYFKLLE-----PLP-ATEILAHRVIWSFPFMLALLFLLRQWRELKQLLKQPKT-LLMLALTALL 81 (293)
T ss_pred hHHHHHHHHHHHHHHHHHHHHc-----cCC-HHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhCcHH-HHHHHHHHHH
Confidence 3344444455566677778877 577 899999999988877666555444433 11122222 3446667788
Q ss_pred HHHHHhhhhhhcccccHHHHHHHHHHHHHHHHHHHHHhccccccchhhHHHHHHHhhhheeeecCcccchhHHHHHHHHH
Q 018749 96 YSLSLWLSNSAYIYLSVSFIQMLKALMPVAVYSIGVTFKKESFKSDTMCNMVSISVGVAIAAYGEAKFDSWGVVLQLGAV 175 (351)
Q Consensus 96 ~~~~~~~~~~al~~~~~s~~~vi~~~~pi~~~ll~~~~~~e~~~~~~~~~~~l~~~Gv~l~~~~~~~~~~~G~~~~l~s~ 175 (351)
.+.+...+.+|.+.-.+-.+++=.+..|++.++++.+++|||+++.||++++++.+|+..-.....+.++.... =+
T Consensus 82 i~~nW~lfiWAvn~g~~leaSLGY~InPL~~VllG~lflkErls~~Q~iAV~lA~~GV~~~~~~~g~lpwval~----la 157 (293)
T COG2962 82 IGLNWWLFIWAVNNGHVLEASLGYFINPLVNVLLGRLFLKERLSRLQWIAVGLAAAGVLIQTWLLGSLPWVALA----LA 157 (293)
T ss_pred HHHHHHHhheecCCCchhHHHhHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHcCCCcHHHHH----HH
Confidence 89999999999988788888888899999999999999999999999999999999999888777777775543 45
Q ss_pred HHHHHHHHHHHHHhhcCCCCCChHHHHHHHhHHHHHHHHHHHHHhh-chhhhhcCCCcchhHHHHHHHHHHHHHHHHHHH
Q 018749 176 AFEATRLVMIQILLTSKGITLNPITSLYYVAPCCLVFLLVPWIFVE-LPILRETSSFHFDFVIFGTNSLCAFALNLAVFL 254 (351)
Q Consensus 176 ~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (351)
++|++|...-|+. +.|+.+....-...-.+..+......+ .++.... .....+.+++..+..+..-=.+...
T Consensus 158 ~sf~~Ygl~RK~~------~v~a~~g~~lE~l~l~p~al~yl~~l~~~~~~~~~-~~~~~~~LLv~aG~vTavpL~lf~~ 230 (293)
T COG2962 158 LSFGLYGLLRKKL------KVDALTGLTLETLLLLPVALIYLLFLADSGQFLQQ-NANSLWLLLVLAGLVTAVPLLLFAA 230 (293)
T ss_pred HHHHHHHHHHHhc------CCchHHhHHHHHHHHhHHHHHHHHHHhcCchhhhc-CCchHHHHHHHhhHHHHHHHHHHHH
Confidence 6788888776664 456666555444333333332222222 2221111 1223355666666666655455567
Q ss_pred HHhcchhHHHHHHhhhhhHHHhhhhHhhcCCccchhhHHHHHHHHHhHhhhhhhhhh
Q 018749 255 LVGKTSALTMNVAGVVKDWLLIAFSWSVIKDTVTPINLFGYGLAFLGVAYYNHSKLQ 311 (351)
Q Consensus 255 ~~~~~~~~~~s~~~~l~~v~~~~~~~~~~~e~~s~~~~~G~~li~~g~~l~~~~~~~ 311 (351)
.-++.+-.+.++..+++|....+++++++||+++..+++..+++..|+.+|..+...
T Consensus 231 aa~~lpls~~G~lqYi~Ptl~fllav~i~~E~~~~~~~~~F~~IW~aL~l~~~d~l~ 287 (293)
T COG2962 231 AAKRLPLSTLGFLQYIEPTLMFLLAVLIFGEPFDSDQLVTFAFIWLALALFSIDGLY 287 (293)
T ss_pred HHhcCCHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 789999999999999999999999999999999999999999999999999877654
No 26
>TIGR00776 RhaT RhaT L-rhamnose-proton symporter family protein. These proteins are members of the L-Rhamnose Symporter (RhaT) Family (TC 2.A.7). This family includes two characterized members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.
Probab=99.81 E-value=3.2e-17 Score=147.83 Aligned_cols=264 Identities=15% Similarity=0.107 Sum_probs=186.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhcccccccccHHHHHHHHHHHHHHHHHHHHHHhcccCCCCCChhhHhHHHHHHHHH
Q 018749 16 LLSYTYVAIWIFLSFTVIVYNKYILDKKMYNWPFPISLTMIHMSFCATLAFLLIKVFKFVEPVTMSRDLYFSSVVPIGAL 95 (351)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~~~K~~l~~~~~~~~~p~~~~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 95 (351)
...++.+++|+. .....|... +++ |.++. |..++.++...+....+. ++ .+.++.+..-+..|+.
T Consensus 4 l~~lia~~~wGs----~g~~~k~~~-----g~~-~~~~~--~~~~g~l~~~~~~~~~~~--~~-~~~~~~~~~g~l~G~~ 68 (290)
T TIGR00776 4 LIALIPALFWGS----FVLINVKIG-----GGP-YSQTL--GTTFGALILSIAIAIFVL--PE-FWALSIFLVGLLSGAF 68 (290)
T ss_pred HHHHHHHHHHhh----hHHHHhccC-----CCH-HHHHH--HHHHHHHHHHHHHHHHhC--Cc-ccccHHHHHHHHHHHH
Confidence 344444555544 444556654 455 43433 777777766555443332 11 2223334556667777
Q ss_pred HHHHHhhhhhhcccccHHHHHHHHH-HHHHHHHHHHHHhccccccchh----hHHHHHHHhhhheeeecCcc-------c
Q 018749 96 YSLSLWLSNSAYIYLSVSFIQMLKA-LMPVAVYSIGVTFKKESFKSDT----MCNMVSISVGVAIAAYGEAK-------F 163 (351)
Q Consensus 96 ~~~~~~~~~~al~~~~~s~~~vi~~-~~pi~~~ll~~~~~~e~~~~~~----~~~~~l~~~Gv~l~~~~~~~-------~ 163 (351)
.+..+.+++.+.++++++.+..+.+ +.|+++.+++.+++||+.+.++ ++++++.++|+.+....+.+ .
T Consensus 69 w~ig~~~~~~ai~~~gva~a~~i~~~~~~v~~~l~~~~~f~e~~t~~~~~~~~~g~~l~l~G~~l~~~~~~~~~~~~~~~ 148 (290)
T TIGR00776 69 WALGQINQFKSMRYMGVSKTMPISTGFQLVGGTLFGVIVFGEWSTSIQTLLGLLALILIIIGVYLTSRSKDKSAGIKSEF 148 (290)
T ss_pred HHhhhhhHHHHHHHHhHHHHhHHHHHHHHHHHHHHHHHHhhhccchHHHHHHHHHHHHHHHhHheEEecccccccccccc
Confidence 8999999999999999999999998 8889999999999999999999 99999999999987654321 2
Q ss_pred c-hhHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCChHHH---HHHHhHHHHHHHHHHHHHhhchhhhhcCCCcchhHHHH
Q 018749 164 D-SWGVVLQLGAVAFEATRLVMIQILLTSKGITLNPITS---LYYVAPCCLVFLLVPWIFVELPILRETSSFHFDFVIFG 239 (351)
Q Consensus 164 ~-~~G~~~~l~s~~~~a~~~v~~~~~~~~~~~~~~~~~~---~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (351)
+ ..|++++++++++|+.|.+..|+. ..++... ..+....+.....++.. .+.+. ........+
T Consensus 149 ~~~~Gi~~~l~sg~~y~~~~~~~~~~------~~~~~~~~~~~~~g~~~~~~~~~~~~~-~~~~~------~~~~~~~~~ 215 (290)
T TIGR00776 149 NFKKGILLLLMSTIGYLVYVVVAKAF------GVDGLSVLLPQAIGMVIGGIIFNLGHI-LAKPL------KKYAILLNI 215 (290)
T ss_pred chhhHHHHHHHHHHHHHHHHHHHHHc------CCCcceehhHHHHHHHHHHHHHHHHHh-cccch------HHHHHHHHH
Confidence 3 689999999999999999999975 2456555 33333333333322220 00110 111122233
Q ss_pred HHHHHHHHHHHHHHHHHh-cchhHHHHHHhhhhhHHHhhhhHhhcCCccchhhH----HHHHHHHHhHhhhhh
Q 018749 240 TNSLCAFALNLAVFLLVG-KTSALTMNVAGVVKDWLLIAFSWSVIKDTVTPINL----FGYGLAFLGVAYYNH 307 (351)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~-~~~~~~~s~~~~l~~v~~~~~~~~~~~e~~s~~~~----~G~~li~~g~~l~~~ 307 (351)
..++.....+..++...+ +.++.+.++...++|+.++++++++++|+.+..|+ +|.++++.|+.+...
T Consensus 216 ~~Gi~~~ia~~~y~~~~~~~~~~~~~~~ls~~~pvia~~~~v~~l~E~~~~~~~~~~~iG~~lIi~~~~l~~~ 288 (290)
T TIGR00776 216 LPGLMWGIGNFFYLFSAQPKVGVATSFSLSQLGVIISTLGGILILGEKKTKREMIAISVGIILIIIAANILGI 288 (290)
T ss_pred HHHHHHHHHHHHHHHHcccccchhhHHHHHHHHHHHHHHHHHHHhccCCCcceeehhHHHHHHHHHHHHHHhc
Confidence 355555555666667788 99999999999999999999999999999999999 999999999987543
No 27
>KOG1583 consensus UDP-N-acetylglucosamine transporter [Carbohydrate transport and metabolism]
Probab=99.78 E-value=1e-18 Score=148.13 Aligned_cols=256 Identities=16% Similarity=0.191 Sum_probs=200.2
Q ss_pred cHHHHHHHHHHHHHHHHHHHHHHhcccCCCCCChhhHhHHHHHHHHHHHHHHhhhhhhccc-ccHHHHHHHHHHHHHHHH
Q 018749 49 FPISLTMIHMSFCATLAFLLIKVFKFVEPVTMSRDLYFSSVVPIGALYSLSLWLSNSAYIY-LSVSFIQMLKALMPVAVY 127 (351)
Q Consensus 49 ~p~~~~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~al~~-~~~s~~~vi~~~~pi~~~ 127 (351)
.-..++|.||++-+.--++..--.... +++.|.+. .+.....+...+.+.|+++++ +|.+...++++-+++.++
T Consensus 32 sgNLITFaqFlFia~eGlif~skf~~~-k~kiplk~----Y~i~V~mFF~vnv~NN~al~f~I~~PlHiIfRsgsll~nM 106 (330)
T KOG1583|consen 32 SGNLITFAQFLFIATEGLIFTSKFFTV-KPKIPLKD----YAITVAMFFIVNVTNNYALKFNIPMPLHIIFRSGSLLANM 106 (330)
T ss_pred CeeehHHHHHHHHHHhceeeecccccc-CCCCchhh----hheehheeeeeeeeccceeeecccceEEEEEecCcHHHHH
Confidence 357789999998777655543211112 46666543 444555667778889999997 899999999999999999
Q ss_pred HHHHHhccccccchhhHHHHHHHhhhheeeecC---c--------------cc--chhHHHHHHHHHHHHHHHHHHHHHH
Q 018749 128 SIGVTFKKESFKSDTMCNMVSISVGVAIAAYGE---A--------------KF--DSWGVVLQLGAVAFEATRLVMIQIL 188 (351)
Q Consensus 128 ll~~~~~~e~~~~~~~~~~~l~~~Gv~l~~~~~---~--------------~~--~~~G~~~~l~s~~~~a~~~v~~~~~ 188 (351)
++++++.|+|++.+|+.++++..+|+++....+ . ++ -.+|+.+..++.+..|.-.+++|+.
T Consensus 107 ~~g~il~~k~Ys~~Qy~Sv~~iTiGiiIcTl~s~~d~~~~~~~l~~~~~~~~~~~w~iGi~lL~~al~~sa~mgiyqE~~ 186 (330)
T KOG1583|consen 107 ILGWILLGKRYSLRQYSSVLMITIGIIICTLFSSKDGRSKLSGLDSGSAQSDFFWWLIGIALLVFALLLSAYMGIYQETT 186 (330)
T ss_pred HHHHHhccceeehhhhhhHHhhhhhheeEEeecCcchhhhhcccccCcccccchHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999876421 0 01 1469999999999999999999999
Q ss_pred hhcCCCCCChHHHHHHHhHHHHHHHHHHH--HHhhchhhhhc---------CCCcchhHHHHHHHHHHHHHHHHHHHHHh
Q 018749 189 LTSKGITLNPITSLYYVAPCCLVFLLVPW--IFVELPILRET---------SSFHFDFVIFGTNSLCAFALNLAVFLLVG 257 (351)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~~--~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (351)
.|+++ .++-+.++|....+.+..+... ...+....... ...+..|+.++..++..+.+--..+.+..
T Consensus 187 Y~kyG--Kh~~EalFytH~LsLP~Flf~~~div~~~~~~~~se~~~~p~~g~~vP~~~~yLl~n~L~Qy~CikgVy~L~t 264 (330)
T KOG1583|consen 187 YQKYG--KHWKEALFYTHFLSLPLFLFMGDDIVSHWRLAFKSESYLIPLLGFKVPSMWVYLLFNVLTQYFCIKGVYILTT 264 (330)
T ss_pred HHHhc--CChHHHHHHHHHhccchHHHhcchHHHHHHHHhcCcceeccccCccccHHHHHHHHHHHHHHHHHHhhhhhhc
Confidence 99865 4899999999988876554331 11110000000 11334478888999999998877788899
Q ss_pred cchhHHHHHHhhhhhHHHhhhhHhhcCCccchhhHHHHHHHHHhHhhhhhhhhh
Q 018749 258 KTSALTMNVAGVVKDWLLIAFSWSVIKDTVTPINLFGYGLAFLGVAYYNHSKLQ 311 (351)
Q Consensus 258 ~~~~~~~s~~~~l~~v~~~~~~~~~~~e~~s~~~~~G~~li~~g~~l~~~~~~~ 311 (351)
++++.+.++.-+++..+++++|...|.+++++.+|+|..+++.|.++|.....+
T Consensus 265 e~~sLTVTlvltlRKFvSLl~SiiyF~Npft~~h~lGa~lVF~Gt~~fa~~~~~ 318 (330)
T KOG1583|consen 265 ETSSLTVTLVLTLRKFVSLLFSIIYFENPFTPWHWLGAALVFFGTLLFANVWNH 318 (330)
T ss_pred eecceEEEEeeeHHHHHHHhheeeEecCCCCHHHHHHHHHHHHHHHHHHHHHcC
Confidence 999999999999999999999999999999999999999999999999865544
No 28
>PF04142 Nuc_sug_transp: Nucleotide-sugar transporter; InterPro: IPR007271 This family of membrane proteins transport nucleotide sugars from the cytoplasm into golgi vesicles. P78382 from SWISSPROT transports CMP-sialic acid, P78381 from SWISSPROT transports UDP-galactose and Q9Y2D2 from SWISSPROT transports UDP-GlcNAc. This family has some but not complete overlap with the UDP-galactose transporter family IPR004689 from INTERPRO.; GO: 0005351 sugar:hydrogen symporter activity, 0008643 carbohydrate transport, 0000139 Golgi membrane, 0016021 integral to membrane
Probab=99.76 E-value=1.8e-16 Score=138.46 Aligned_cols=209 Identities=14% Similarity=0.131 Sum_probs=158.4
Q ss_pred hhhHhHHHHHHHHHHHHHHhhhhhhcccccHHHHHHHHHHHHHHHHHHHHHhccccccchhhHHHHHHHhhhheeeecCc
Q 018749 82 RDLYFSSVVPIGALYSLSLWLSNSAYIYLSVSFIQMLKALMPVAVYSIGVTFKKESFKSDTMCNMVSISVGVAIAAYGEA 161 (351)
Q Consensus 82 ~~~~~~~~~~~~l~~~~~~~~~~~al~~~~~s~~~vi~~~~pi~~~ll~~~~~~e~~~~~~~~~~~l~~~Gv~l~~~~~~ 161 (351)
+++. ..+.+.+++|+..+.+.+.+++++++++.+++..+..+++++++++++|+|++.+||.++.+.++|+.+...++.
T Consensus 14 ~~~~-~~~~vPA~lY~~qn~L~~~al~~ld~~t~qvl~q~kIl~TAl~s~~~L~r~ls~~qW~aL~lL~~Gv~lv~~~~~ 92 (244)
T PF04142_consen 14 PKDT-LKLAVPALLYAIQNNLQFVALSYLDPSTFQVLSQSKILFTALFSVLLLKRRLSRRQWLALFLLVAGVVLVQLSSS 92 (244)
T ss_pred HHHH-HHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHhhHHHHHHHHHHHHHHcccchhhHHHHHHHHHHHheeecCCc
Confidence 3443 557788899999999999999999999999999999999999999999999999999999999999999765321
Q ss_pred -----------------ccchhHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCChHHHHHHHhHHHHHHHHHHHHHhhchh
Q 018749 162 -----------------KFDSWGVVLQLGAVAFEATRLVMIQILLTSKGITLNPITSLYYVAPCCLVFLLVPWIFVELPI 224 (351)
Q Consensus 162 -----------------~~~~~G~~~~l~s~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~ 224 (351)
.....|+++.++++++.++..++.||++|+++ .+.+..-......+.++.++.....+...
T Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~G~~~vl~~~~~S~~agVy~E~~lK~~~--~s~~~~N~qL~~~gi~~~~~~~~~~~~~~ 170 (244)
T PF04142_consen 93 QSSDNSSSSSVHHDASNQNPLLGLLAVLAAAFLSGFAGVYFEKLLKRSN--VSLWIQNMQLYLFGILFNLLALLLSDGSA 170 (244)
T ss_pred cccccccccccccccccchhHhHHHHHHHHHHHHHHHHHHHHHHhcccc--hhHHHHHHHHHHHHHHHHHHHHhcccccc
Confidence 11358999999999999999999999999754 33333333344445554444443333322
Q ss_pred hhhc---CCCcc-hhHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHhhhhhHHHhhhhHhhcCCccchhhHHHHHH
Q 018749 225 LRET---SSFHF-DFVIFGTNSLCAFALNLAVFLLVGKTSALTMNVAGVVKDWLLIAFSWSVIKDTVTPINLFGYGL 297 (351)
Q Consensus 225 ~~~~---~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~l~~v~~~~~~~~~~~e~~s~~~~~G~~l 297 (351)
..+. ..++. .|..+....+.+. ..-..+|+.+...-+....+..+++.+.++++||.++|....+|..+
T Consensus 171 ~~~~g~f~G~~~~~~~~i~~~a~gGl----lva~v~KyadnI~K~fa~a~siv~t~~~s~~lf~~~~s~~f~lg~~~ 243 (244)
T PF04142_consen 171 ISESGFFHGYSWWVWIVIFLQAIGGL----LVAFVLKYADNIVKGFATAVSIVLTAVLSVLLFGFPPSLSFLLGAAL 243 (244)
T ss_pred cccCCchhhcchHHHHHHHHHHHhhH----HHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhCCCCchHHhhheec
Confidence 2211 12222 1333333333333 33456899999999999999999999999999999999999999865
No 29
>KOG3912 consensus Predicted integral membrane protein [General function prediction only]
Probab=99.76 E-value=5.1e-16 Score=131.98 Aligned_cols=283 Identities=14% Similarity=0.133 Sum_probs=207.2
Q ss_pred HHHHHHHHHHHHHHHHHhhccc---ccccccHHHHHHHHHHHHHHHHHHHHHHhcccC--------------CCCCChhh
Q 018749 22 VAIWIFLSFTVIVYNKYILDKK---MYNWPFPISLTMIHMSFCATLAFLLIKVFKFVE--------------PVTMSRDL 84 (351)
Q Consensus 22 ~~~~~~~~~~~~~~~K~~l~~~---~~~~~~p~~~~~~r~~~~~~~l~~~~~~~~~~~--------------~~~~~~~~ 84 (351)
-++....+...++..|+.-+.. .-+|++|+..+..-|+ +-..|+....+.|.+. ..+.|.+.
T Consensus 8 s~imvvsGs~Ntl~aKwadsi~~eg~pgfqhpvlqal~mFl-GEflCl~vf~lir~~sn~~g~~s~~~~ilsq~~~pf~p 86 (372)
T KOG3912|consen 8 SLIMVVSGSFNTLVAKWADSIQAEGSPGFQHPVLQALLMFL-GEFLCLAVFKLIRLRSNGQGVSSDLDSILSQDSSPFNP 86 (372)
T ss_pred hhhhhhhccHHHHHHHHHHhhhhhCCCccccHHHHHHHHHH-HHHHHHHHHHHHHHhhcCCCcccccccccccccCCCCc
Confidence 3455667778888999985422 2347778887766664 4434443333232221 11123333
Q ss_pred HhHHHHHHHHHHHHHHhhhhhhcccccHHHHHHHHHHHHHHHHHHHHHhccccccchhhHHHHHHHhhhheeeecCc---
Q 018749 85 YFSSVVPIGALYSLSLWLSNSAYIYLSVSFIQMLKALMPVAVYSIGVTFKKESFKSDTMCNMVSISVGVAIAAYGEA--- 161 (351)
Q Consensus 85 ~~~~~~~~~l~~~~~~~~~~~al~~~~~s~~~vi~~~~pi~~~ll~~~~~~e~~~~~~~~~~~l~~~Gv~l~~~~~~--- 161 (351)
..+++.+++-..+..+.|.++.+++++..|+++....+|+.+++.-+++++++.+||+++.....|+..+...|.
T Consensus 87 --~lfl~Pal~Di~gsslm~vgL~lTsASsfQMlRGaviIFvglfst~~Ln~ti~~~qWl~i~fv~lGlviVg~~d~~~~ 164 (372)
T KOG3912|consen 87 --VLFLPPALCDIAGSSLMYVGLNLTSASSFQMLRGAVIIFVGLFSTMFLNRTITGRQWLGILFVSLGLVIVGSLDVHLV 164 (372)
T ss_pred --ceecChHHHHHhhhHHHHHHHHHhhHHHHHHhhcchhhhhHHHHHHHHhcccchhhHHHHHHHHhhhheeeeeecccc
Confidence 457778899888888999999999999999999999999999999999999999999999999999998765431
Q ss_pred -------ccchhHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCChHHHHHHHhHHHHHHHHHHHHHh----hchhhh-hcC
Q 018749 162 -------KFDSWGVVLQLGAVAFEATRLVMIQILLTSKGITLNPITSLYYVAPCCLVFLLVPWIFV----ELPILR-ETS 229 (351)
Q Consensus 162 -------~~~~~G~~~~l~s~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~----~~~~~~-~~~ 229 (351)
+.-..|+++.+++-+.-|+..++.+|.+++. +.+|.+...|..+++.+.+....... .+..+. +..
T Consensus 165 ~~p~~d~s~iitGdllIiiaqiivaiQ~v~Eek~l~~~--nV~pl~avg~eGlfG~v~~slL~i~m~yi~~~~sfS~~~~ 242 (372)
T KOG3912|consen 165 TDPYTDYSSIITGDLLIIIAQIIVAIQMVCEEKQLKKS--NVAPLQAVGWEGLFGLVILSLLAIPMYYIPSGDSFSCNPR 242 (372)
T ss_pred cCCccccccchhhhHHHHHHHHHHHHHHHHHHhhhhhc--cCCHHHHhhhhhhHHHHHHHHHHHHHhheecCCcCcCCCC
Confidence 1236799999999999999999999998864 67999999998888866543332211 110110 000
Q ss_pred ----CCcc---------hhHH-HHHHHHHHHHHHHHHHHHHhcchhHHHHHHhhhhhHHHhhhhHhhcCCccchhhHHHH
Q 018749 230 ----SFHF---------DFVI-FGTNSLCAFALNLAVFLLVGKTSALTMNVAGVVKDWLLIAFSWSVIKDTVTPINLFGY 295 (351)
Q Consensus 230 ----~~~~---------~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~l~~v~~~~~~~~~~~e~~s~~~~~G~ 295 (351)
+|.. ...+ +....+.-..+|.......|..++++-.+...++..+..+++..+..|.++..|+.|.
T Consensus 243 g~~eD~~~~~~~~~e~p~l~val~~~~vSiAffNfaGlsitk~~SattRmllD~lRt~~IWv~si~m~~E~f~llqilGF 322 (372)
T KOG3912|consen 243 GVLEDWGDAFAALQESPSLAVALIGFTVSIAFFNFAGLSITKELSATTRMLLDSLRTYVIWVFSIAMGWEYFHLLQILGF 322 (372)
T ss_pred cchhhHHHHHHHhcCCchhHHHHhhhhhheeeeeehhhHHHHHhhHHHHHHHHhhhhhhhhHhHHHHHHHHHHHHHHHHH
Confidence 1100 0122 2222233334567778889999999999999999999999999999999999999999
Q ss_pred HHHHHhHhhhhhhh
Q 018749 296 GLAFLGVAYYNHSK 309 (351)
Q Consensus 296 ~li~~g~~l~~~~~ 309 (351)
.+.+.|+.+|+...
T Consensus 323 liLi~Gi~lY~~il 336 (372)
T KOG3912|consen 323 LILIMGIILYNQIL 336 (372)
T ss_pred HHHHHHHHHHHHHH
Confidence 99999999998544
No 30
>KOG2234 consensus Predicted UDP-galactose transporter [Carbohydrate transport and metabolism]
Probab=99.75 E-value=5.4e-15 Score=131.11 Aligned_cols=281 Identities=13% Similarity=0.094 Sum_probs=203.3
Q ss_pred HHHHHHHHHHHHHHHHHHhhcccccccccHHHHHHHHHHHHHHHHHHHHHHhc-c--cC-CCC------CChhhHhHHHH
Q 018749 21 YVAIWIFLSFTVIVYNKYILDKKMYNWPFPISLTMIHMSFCATLAFLLIKVFK-F--VE-PVT------MSRDLYFSSVV 90 (351)
Q Consensus 21 ~~~~~~~~~~~~~~~~K~~l~~~~~~~~~p~~~~~~r~~~~~~~l~~~~~~~~-~--~~-~~~------~~~~~~~~~~~ 90 (351)
..++-.+.+.+..+.-|+.-.+++.+|- |....+.-=++-.++|........ . .+ .+. ..+++ ..+..
T Consensus 19 ~l~~~t~~~~~l~l~l~ys~~~~~~~f~-~tt~v~~~Ei~Kl~~c~~~~~~~~~~~~~~~~~~l~~~i~~~~~~-~lk~~ 96 (345)
T KOG2234|consen 19 SLIVLTAQNTALTLLLRYSRTREKPMFL-PTTAVFLTEVIKLVFCLFLLLFEERKYAKKSLKSLSKEILAAPRE-TLKVS 96 (345)
T ss_pred HHHHHHHHHhhHHHHHHHHhcCCCCCcc-hhHHHHHHHHHHHHHHHHHHHHHhhHHhhhhhhhcCHHHHhChHH-HHHHH
Confidence 3445556667788888888765545566 777777766666666655544221 1 11 111 12223 35677
Q ss_pred HHHHHHHHHHhhhhhhcccccHHHHHHHHHHHHHHHHHHHHHhccccccchhhHHHHHHHhhhheeeecC----------
Q 018749 91 PIGALYSLSLWLSNSAYIYLSVSFIQMLKALMPVAVYSIGVTFKKESFKSDTMCNMVSISVGVAIAAYGE---------- 160 (351)
Q Consensus 91 ~~~l~~~~~~~~~~~al~~~~~s~~~vi~~~~pi~~~ll~~~~~~e~~~~~~~~~~~l~~~Gv~l~~~~~---------- 160 (351)
+.++.|++.+.+.+.++.+.+++++++...+..+.++++.+++++||++++||.++++.++|+.++..+.
T Consensus 97 vPa~iYalqNnl~yval~~ldaatyqVt~qlKI~tTA~f~vl~L~rkLs~~Qw~Al~lL~~Gv~~vQ~~~~~~~~a~~~~ 176 (345)
T KOG2234|consen 97 VPALIYALQNNLQYVALSNLDAATYQVTYQLKILTTAIFSVLILRRKLSRLQWMALVLLFAGVALVQLPSLSPTGAKSES 176 (345)
T ss_pred HHHHHHHHhhhHHHHHHhcCCchhhhhhhhHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHhccCCCCCCccCCC
Confidence 8889999999999999999999999999999999999999999999999999999999999999977321
Q ss_pred -cccchhHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCChHHHHHHHhHHHHHHHHHHHHHhhchhhhhc---CCCcc-hh
Q 018749 161 -AKFDSWGVVLQLGAVAFEATRLVMIQILLTSKGITLNPITSLYYVAPCCLVFLLVPWIFVELPILRET---SSFHF-DF 235 (351)
Q Consensus 161 -~~~~~~G~~~~l~s~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~---~~~~~-~~ 235 (351)
.+..+.|....+.++++.++..++.||++++.+ .+.+..-.....++.++.+...+..|.....+. ..|+. .|
T Consensus 177 ~~~n~~~G~~avl~~c~~SgfAgvYfEkiLK~s~--~s~wi~NiqL~~~g~~f~~l~~~~~d~~~i~~~gff~G~s~~vw 254 (345)
T KOG2234|consen 177 SAQNPFLGLVAVLVACFLSGFAGVYFEKILKGSN--VSLWIRNIQLYFFGILFNLLTILLQDGEAINEYGFFYGYSSIVW 254 (345)
T ss_pred cccchhhhHHHHHHHHHHHHHHHHHHHHHHhcCC--chHHHHHHHHHHHHHHHHHHHHhhccccccccCCccccccHHHH
Confidence 112478999999999999999999999998643 344433333444455555444444443333221 12332 24
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHhhhhhHHHhhhhHhhcCCccchhhHHHHHHHHHhHhhhhhhh
Q 018749 236 VIFGTNSLCAFALNLAVFLLVGKTSALTMNVAGVVKDWLLIAFSWSVIKDTVTPINLFGYGLAFLGVAYYNHSK 309 (351)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~l~~v~~~~~~~~~~~e~~s~~~~~G~~li~~g~~l~~~~~ 309 (351)
..++..++.+.... ..+|+.+-..-+....+..+++.+.|+.+||-++|....+|..+++.++.+|...+
T Consensus 255 ~vVl~~a~gGLlvs----~v~KyADnIlK~f~~s~aiilt~v~S~~Lf~~~~t~~F~lG~~lVi~Si~lY~~~P 324 (345)
T KOG2234|consen 255 LVVLLNAVGGLLVS----LVMKYADNILKGFSTSVAIILTTVASIALFDFQLTLYFLLGALLVILSIFLYSLYP 324 (345)
T ss_pred HHHHHHhccchhHH----HHHHHhHHHHHHHHHHHHHHHHHHHHHHHccCCchHHHHHHHHHHHHHHHHhhcCC
Confidence 55555555555443 34688888888888888889999999999999999999999999999999998443
No 31
>KOG4510 consensus Permease of the drug/metabolite transporter (DMT) superfamily [General function prediction only]
Probab=99.73 E-value=1.3e-18 Score=146.82 Aligned_cols=270 Identities=14% Similarity=0.126 Sum_probs=195.0
Q ss_pred HHHHHHHHHHHHHHHHhhcccccccccHHHHHHHHHHHHHHHHHHHHHHhcccCCCCCChhhHhHHHHHHHHHHHHHHhh
Q 018749 23 AIWIFLSFTVIVYNKYILDKKMYNWPFPISLTMIHMSFCATLAFLLIKVFKFVEPVTMSRDLYFSSVVPIGALYSLSLWL 102 (351)
Q Consensus 23 ~~~~~~~~~~~~~~K~~l~~~~~~~~~p~~~~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 102 (351)
.+.++.+.++.+..|... ++ |....--|++.-.++.++....++..---+.++|. + .++-++.-+.+...
T Consensus 44 ~vs~ff~~~~vv~t~~~e------~~-p~e~a~~r~l~~mlit~pcliy~~~~v~gp~g~R~--~-LiLRg~mG~tgvml 113 (346)
T KOG4510|consen 44 TVSYFFNSCMVVSTKVLE------ND-PMELASFRLLVRMLITYPCLIYYMQPVIGPEGKRK--W-LILRGFMGFTGVML 113 (346)
T ss_pred hhHHHHhhHHHhhhhhhc------cC-hhHhhhhhhhhehhhhheEEEEEeeeeecCCCcEE--E-EEeehhhhhhHHHH
Confidence 334666777777766665 34 78888888776666555543322211001111111 1 22224443444556
Q ss_pred hhhhcccccHHHHHHHHHHHHHHHHHHHHHhccccccchhhHHHHHHHhhhheeeec-----C---------cccchhHH
Q 018749 103 SNSAYIYLSVSFIQMLKALMPVAVYSIGVTFKKESFKSDTMCNMVSISVGVAIAAYG-----E---------AKFDSWGV 168 (351)
Q Consensus 103 ~~~al~~~~~s~~~vi~~~~pi~~~ll~~~~~~e~~~~~~~~~~~l~~~Gv~l~~~~-----~---------~~~~~~G~ 168 (351)
.|+|++|.+.+.+.+|..++|.++.++++.++||++++.+.++..+.+.|++++... + .+.+..|.
T Consensus 114 myya~~~mslaDA~vItFssPvft~ifaw~~LkE~~t~~eaL~s~itl~GVVLIvRPpFlFG~~t~g~~~s~~~~~~~gt 193 (346)
T KOG4510|consen 114 MYYALMYMSLADAVVITFSSPVFTIIFAWAFLKEPFTKFEALGSLITLLGVVLIVRPPFLFGDTTEGEDSSQVEYDIPGT 193 (346)
T ss_pred HHHHHhhcchhheEEEEecChHHHHHHHHHHHcCCCcHHHHHHHHHhhheEEEEecCCcccCCCccccccccccccCCch
Confidence 889999999999999999999999999999999999999999999999999997642 1 12345688
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhcCCCCCChHHHHHHHhHHHHHHHHHHHHHhhchhhhhcCCCcchhHHHHHHHHHHHHH
Q 018749 169 VLQLGAVAFEATRLVMIQILLTSKGITLNPITSLYYVAPCCLVFLLVPWIFVELPILRETSSFHFDFVIFGTNSLCAFAL 248 (351)
Q Consensus 169 ~~~l~s~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (351)
+.++.++++-|--.++.|++-+ +.|......|..+++.+..++........++. .-..++++++.-++.+++.
T Consensus 194 ~aai~s~lf~asvyIilR~iGk----~~h~~msvsyf~~i~lV~s~I~~~~ig~~~lP---~cgkdr~l~~~lGvfgfig 266 (346)
T KOG4510|consen 194 VAAISSVLFGASVYIILRYIGK----NAHAIMSVSYFSLITLVVSLIGCASIGAVQLP---HCGKDRWLFVNLGVFGFIG 266 (346)
T ss_pred HHHHHhHhhhhhHHHHHHHhhc----cccEEEEehHHHHHHHHHHHHHHhhccceecC---ccccceEEEEEehhhhhHH
Confidence 8899999988888888888744 45666666777777777665554332221211 1123356666678888999
Q ss_pred HHHHHHHHhcchhHHHHHHhhhhhHHHhhhhHhhcCCccchhhHHHHHHHHHhHhhhhhhh
Q 018749 249 NLAVFLLVGKTSALTMNVAGVVKDWLLIAFSWSVIKDTVTPINLFGYGLAFLGVAYYNHSK 309 (351)
Q Consensus 249 ~~~~~~~~~~~~~~~~s~~~~l~~v~~~~~~~~~~~e~~s~~~~~G~~li~~g~~l~~~~~ 309 (351)
|+..-+.+++-.+...++..+...+++.++.+++|+|.++++.|.|+++++.+..+....|
T Consensus 267 QIllTm~lQiErAGpvaim~~~dvvfAf~wqv~ff~~~Pt~ws~~Ga~~vvsS~v~~a~~k 327 (346)
T KOG4510|consen 267 QILLTMGLQIERAGPVAIMTYTDVVFAFFWQVLFFGHWPTIWSWVGAVMVVSSTVWVALKK 327 (346)
T ss_pred HHHHHHHhhhhccCCeehhhHHHHHHHHHHHHHHhcCCChHHHhhceeeeehhHHHHHHHH
Confidence 9888888888888899999999999999999999999999999999999988887654433
No 32
>PF03151 TPT: Triose-phosphate Transporter family; InterPro: IPR004853 This family consists entirely of aligned regions from Drosophila melanogaster proteins. O49724 from SWISSPROT contains three repeats of this region. In other proteins, the aligned region is located towards the C terminus. The function of the aligned region is unknown.
Probab=99.69 E-value=9.2e-16 Score=125.37 Aligned_cols=141 Identities=35% Similarity=0.481 Sum_probs=123.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhcC---CCCCChHHHHHHHhHHHHHHHHHHHHHhhchhhhhcC------C---Ccch
Q 018749 167 GVVLQLGAVAFEATRLVMIQILLTSK---GITLNPITSLYYVAPCCLVFLLVPWIFVELPILRETS------S---FHFD 234 (351)
Q Consensus 167 G~~~~l~s~~~~a~~~v~~~~~~~~~---~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~------~---~~~~ 234 (351)
|.++++.|.++.|++.++.|+.++++ +.+.++.+++++..+.+.+.+++.+...|.+...... + ....
T Consensus 1 G~~~~l~s~~~~al~~v~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~l~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~ 80 (153)
T PF03151_consen 1 GFILALASSLFSALRNVLIKKLLKKVSSNSKKLNPLNLLYYNSPISFIILLPLAFLLEGPQLSSFFSEIFGEELSSDPNF 80 (153)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHhhhhhhcchHHH
Confidence 78899999999999999999999873 3578999999999999999999988877765522111 1 1233
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHhhhhhHHHhhhhHhhcCCccchhhHHHHHHHHHhHhhhhh
Q 018749 235 FVIFGTNSLCAFALNLAVFLLVGKTSALTMNVAGVVKDWLLIAFSWSVIKDTVTPINLFGYGLAFLGVAYYNH 307 (351)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~l~~v~~~~~~~~~~~e~~s~~~~~G~~li~~g~~l~~~ 307 (351)
+..++.+++.++..|.+.+.++++++|+++++.+.+|.+..++.|+++|||++|..+++|+.+.+.|..+|++
T Consensus 81 ~~~~~~~~~~~~~~n~~~f~~i~~tS~lt~~v~~~~K~~~~i~~s~~~f~~~~t~~~~~G~~l~~~G~~~Ysy 153 (153)
T PF03151_consen 81 IFLLILSGLLAFLYNLSSFLLIKLTSPLTYSVLGNVKRILVILLSVIFFGEPITPLQIIGIVLALVGVLLYSY 153 (153)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhhcChhHHHHHHHHHHHHHHHHHhhhcCCcCCHHHHHHHHHHHHHHheeeC
Confidence 6778889999999999999999999999999999999999999999999999999999999999999999875
No 33
>KOG2766 consensus Predicted membrane protein [Function unknown]
Probab=99.65 E-value=1.4e-16 Score=133.64 Aligned_cols=255 Identities=14% Similarity=0.176 Sum_probs=192.8
Q ss_pred HHHHhhcccccccccHHHHHHHHHHHHHHHHHHHHHHhcccCCCCCChhhHhHHHHHHHHHHHHHHhhhhhhcccccHHH
Q 018749 35 YNKYILDKKMYNWPFPISLTMIHMSFCATLAFLLIKVFKFVEPVTMSRDLYFSSVVPIGALYSLSLWLSNSAYIYLSVSF 114 (351)
Q Consensus 35 ~~K~~l~~~~~~~~~p~~~~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~al~~~~~s~ 114 (351)
.+.++-. .+.+.|..-+|+.+..-+++-.++.. +|. +..+.. +|..++.++.-.-.+.+...|.||++...
T Consensus 36 tss~la~---k~iN~Pt~QtFl~Y~LLalVY~~~~~-fR~-~~~~~~----~~hYilla~~DVEaNy~vV~AyQyTsmtS 106 (336)
T KOG2766|consen 36 TSSELAR---KGINAPTSQTFLNYVLLALVYGPIML-FRR-KYIKAK----WRHYILLAFVDVEANYFVVKAYQYTSMTS 106 (336)
T ss_pred hhHHHHh---ccCCCccHHHHHHHHHHHHHHhhHHH-hhh-HHHHHH----HHHhhheeEEeecccEEEeeehhhcchHH
Confidence 4444442 45667999999999877666555544 222 122222 35566667776777777888999999999
Q ss_pred HHHHHHHHHHHHHHHHHHhccccccchhhHHHHHHHhhhheeeecCc--------ccchhHHHHHHHHHHHHHHHHHHHH
Q 018749 115 IQMLKALMPVAVYSIGVTFKKESFKSDTMCNMVSISVGVAIAAYGEA--------KFDSWGVVLQLGAVAFEATRLVMIQ 186 (351)
Q Consensus 115 ~~vi~~~~pi~~~ll~~~~~~e~~~~~~~~~~~l~~~Gv~l~~~~~~--------~~~~~G~~~~l~s~~~~a~~~v~~~ 186 (351)
.+++.......+.+++++++|.|+.+.++.|+++|+.|+.++...|. +....|+++.+.++-+||..++..+
T Consensus 107 i~lLDcwaip~v~~lsw~fLktrYrlmki~gV~iCi~GvvmvV~sDV~agd~aggsnp~~GD~lvi~GATlYaVSNv~EE 186 (336)
T KOG2766|consen 107 IMLLDCWAIPCVLVLSWFFLKTRYRLMKISGVVICIVGVVMVVFSDVHAGDRAGGSNPVKGDFLVIAGATLYAVSNVSEE 186 (336)
T ss_pred HHHHHHhhhHHHHHHHHHHHHHHHhhheeeeEEeEecceEEEEEeeeccccccCCCCCccCcEEEEecceeeeeccccHH
Confidence 99999999999999999999999999999999999999999876542 2346899999999999999999999
Q ss_pred HHhhcCCCCCChHHHHHHHhHHHHHHHHHHHHHhhchhhhhcCCCcchhHHHHHHHHHHHHHHHHHHHHHhcchhHHHHH
Q 018749 187 ILLTSKGITLNPITSLYYVAPCCLVFLLVPWIFVELPILRETSSFHFDFVIFGTNSLCAFALNLAVFLLVGKTSALTMNV 266 (351)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~ 266 (351)
.+.+ +.|-.+.+....++++++-.+= ...|..... ...|.+.....+...+.-|+.+...-.++|..+++..++
T Consensus 187 flvk----n~d~~elm~~lgLfGaIIsaIQ-~i~~~~~~~-tl~w~~~i~~yl~f~L~MFllYsl~pil~k~~~aT~~nl 260 (336)
T KOG2766|consen 187 FLVK----NADRVELMGFLGLFGAIISAIQ-FIFERHHVS-TLHWDSAIFLYLRFALTMFLLYSLAPILIKTNSATMFNL 260 (336)
T ss_pred HHHh----cCcHHHHHHHHHHHHHHHHHHH-Hhhhcccee-eEeehHHHHHHHHHHHHHHHHHHhhHHheecCCceEEEh
Confidence 9877 5688888888888888776554 333433221 122322223333344555555555567889999999988
Q ss_pred HhhhhhHHHhhhhHhhcCCccchhhHHHHHHHHHhHhhhh
Q 018749 267 AGVVKDWLLIAFSWSVIKDTVTPINLFGYGLAFLGVAYYN 306 (351)
Q Consensus 267 ~~~l~~v~~~~~~~~~~~e~~s~~~~~G~~li~~g~~l~~ 306 (351)
.-.....+++++ ..||-+.+|...+....+..|.++|.
T Consensus 261 slLTsDmwsl~i--~~FgYhv~wLY~laF~~i~~GliiYs 298 (336)
T KOG2766|consen 261 SLLTSDMWSLLI--RTFGYHVDWLYFLAFATIATGLIIYS 298 (336)
T ss_pred hHhHHHHHHHHH--HHHhcchhhhhHHHHHHHHHhhEEee
Confidence 888888999888 66888899999999999999999984
No 34
>PF00892 EamA: EamA-like transporter family; InterPro: IPR000620 This domain is found in proteins including the Erwinia chrysanthemi PecM protein, which is involved in pectinase, cellulase and blue pigment regulation; and the Salmonella typhimurium PagO protein, the function of which is unknown. Many members of this family are classed as drug/metabolite transporters and have no known function. They are predicted to be integral membrane proteins and many of the proteins contain two copies of this domain [].; GO: 0016020 membrane
Probab=99.35 E-value=4.6e-12 Score=99.44 Aligned_cols=122 Identities=20% Similarity=0.217 Sum_probs=97.0
Q ss_pred HHHHHHHHHHhhcccccccccHHHHHHHHHHHHHHHHHHHHHHhcccCCCCCChhhHhHHHHHHHHHHHHHHhhhhhhcc
Q 018749 29 SFTVIVYNKYILDKKMYNWPFPISLTMIHMSFCATLAFLLIKVFKFVEPVTMSRDLYFSSVVPIGALYSLSLWLSNSAYI 108 (351)
Q Consensus 29 ~~~~~~~~K~~l~~~~~~~~~p~~~~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~al~ 108 (351)
++.....+|...+ +++ |...+++|+..+.+ +.++....+..+..+.+++++........+..+....+++.+++
T Consensus 3 ~a~~~~~~k~~~~----~~~-~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ 76 (126)
T PF00892_consen 3 WAIYSVFSKKLLK----KIS-PLSITFWRFLIAGI-LLILLLILGRKPFKNLSPRQWLWLLFLGLLGTALAYLLYFYALK 76 (126)
T ss_pred eeeHHHHHHHHhc----cCC-HHHHHHHHHHHHHH-HHHHHHhhccccccCCChhhhhhhhHhhccceehHHHHHHHHHH
Confidence 3455667888884 688 99999999999987 55554434433335555555444333344446899999999999
Q ss_pred cccHHHHHHHHHHHHHHHHHHHHHhccccccchhhHHHHHHHhhhhee
Q 018749 109 YLSVSFIQMLKALMPVAVYSIGVTFKKESFKSDTMCNMVSISVGVAIA 156 (351)
Q Consensus 109 ~~~~s~~~vi~~~~pi~~~ll~~~~~~e~~~~~~~~~~~l~~~Gv~l~ 156 (351)
+++++.++++.++.|+++.+++++++||+++++++.|++++++|+.++
T Consensus 77 ~~~~~~~~~~~~~~pv~~~i~~~~~~~e~~~~~~~~g~~l~~~g~~l~ 124 (126)
T PF00892_consen 77 YISASIVSILQYLSPVFAAILGWLFLGERPSWRQIIGIILIIIGVVLI 124 (126)
T ss_pred hcchhHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999998764
No 35
>TIGR00803 nst UDP-galactose transporter. NSTs generally appear to function by antiport mechanisms, exchanging a nucleotide-sugar for a nucleotide. Thus, CMP-sialic acid is exchanged for CMP; GDP-mannose is preferentially exchanged for GMP, and UDP-galactose and UDP-N-acetylglucosamine are exchanged for UMP (or possibly UDP). Other nucleotide sugars (e.g., GDP-fucose, UDP-xylose, UDP-glucose, UDP-N-acetylgalactosamine, etc.) may also be transported in exchange for various nucleotides, but their transporters have not been molecularly characterized. Each compound appears to be translocated by its own transport protein. Transport allows the compound, synthesized in the cytoplasm, to be exported to the lumen of the Golgi apparatus or the endoplasmic reticulum where it is used for the synthesis of glycoproteins and glycolipids.
Probab=99.34 E-value=1.2e-11 Score=107.38 Aligned_cols=191 Identities=13% Similarity=0.055 Sum_probs=127.8
Q ss_pred ccHHHHHHHHHHHHHHHHHHHHHhccccccchhhHHHHHHHhhhheeee--------------------cCc-------c
Q 018749 110 LSVSFIQMLKALMPVAVYSIGVTFKKESFKSDTMCNMVSISVGVAIAAY--------------------GEA-------K 162 (351)
Q Consensus 110 ~~~s~~~vi~~~~pi~~~ll~~~~~~e~~~~~~~~~~~l~~~Gv~l~~~--------------------~~~-------~ 162 (351)
++++.....++..|+++++.+..+.+||++..|+++.++...|+..... ++. +
T Consensus 2 isvPa~~~~~s~~l~~v~l~~~~~~~~~~~~~~i~~~~l~~~g~l~~~ls~~q~~al~~l~~~~~~~~~~~~~~~~~~~g 81 (222)
T TIGR00803 2 LSVPIHIIFKQNNLVLIALGNLLAAGKQVTQLKILSTALMTLGSLVASLGDDQWFSLKLLKLGVAIVQMVQSSAKTLMFG 81 (222)
T ss_pred ccccchHHHHhcchHHHHHhcccccceeeehHHHHHHHHHHHHHHHhHhhHHHHHHHHHHHHhHeeeecCCCCccccccc
Confidence 4677888889999999999999999999999999999999888774221 111 2
Q ss_pred cchhHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCChHHHHHHHhHHHHHHHHHHHHHhhchhhhhc---CCCcchhHHHH
Q 018749 163 FDSWGVVLQLGAVAFEATRLVMIQILLTSKGITLNPITSLYYVAPCCLVFLLVPWIFVELPILRET---SSFHFDFVIFG 239 (351)
Q Consensus 163 ~~~~G~~~~l~s~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~---~~~~~~~~~~~ 239 (351)
..+.|....+.+.++.++..+++++..++++. ............+.+.........+....... ..++...+.
T Consensus 82 ~~~~g~~~~l~a~~~~~~~~~y~e~~~k~~~~--~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 157 (222)
T TIGR00803 82 NPVVGLSAVLSALLSSGFAGVYFEKILKDGDT--MFWSRNLQLPLFGLFSTFSVLLWSDGTLISNFGFFIGYPTAVWI-- 157 (222)
T ss_pred cHHHHHHHHHHHHHHHhhhHHHHHHcccCCCC--chHHHHHHHHHHHHHHHHHHHhhcccchhhccCcccCCchHHHH--
Confidence 34678888888888999999999998664321 12111111112222211111111111111111 111211111
Q ss_pred HHHHHHHHHHHHHHHHHhcchhHHHHHHhhhhhHHHhhhhHhhcCCccchhhHHHHHHHHHhHhhh
Q 018749 240 TNSLCAFALNLAVFLLVGKTSALTMNVAGVVKDWLLIAFSWSVIKDTVTPINLFGYGLAFLGVAYY 305 (351)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~l~~v~~~~~~~~~~~e~~s~~~~~G~~li~~g~~l~ 305 (351)
..+.....+.+..+.+|+.++.+.++...++++++.++|+++|||+++..+++|+.+++.|+.+|
T Consensus 158 -~~~~~a~~~~~v~~vlk~~~~~~~~~~~~~~~~~s~lls~~~f~~~ls~~~~~g~~lV~~~~~lY 222 (222)
T TIGR00803 158 -VGLLNVGGGLCIGGVVRYADNTTKSFVTALSIILSTLASVRLFDAKISSTFYLGAILVFLATFLY 222 (222)
T ss_pred -HHHHHHhcCceeeehhHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCccHHHHHHHHHHHeeeEeC
Confidence 22223333445678899999999999999999999999999999999999999999999998765
No 36
>KOG4314 consensus Predicted carbohydrate/phosphate translocator [General function prediction only]
Probab=99.27 E-value=2e-11 Score=99.04 Aligned_cols=224 Identities=12% Similarity=0.115 Sum_probs=162.5
Q ss_pred ChhhHhHHHHHHHHHHHHHHhhhhhhcccccHHHHHHHHHHHHHHHHHHHHHhccccccchhhHHHHHHHhhhheeeecC
Q 018749 81 SRDLYFSSVVPIGALYSLSLWLSNSAYIYLSVSFIQMLKALMPVAVYSIGVTFKKESFKSDTMCNMVSISVGVAIAAYGE 160 (351)
Q Consensus 81 ~~~~~~~~~~~~~l~~~~~~~~~~~al~~~~~s~~~vi~~~~pi~~~ll~~~~~~e~~~~~~~~~~~l~~~Gv~l~~~~~ 160 (351)
+-|.++....|.+++..+.+..+..+++.++++.++.+..+.--|+.+++++.+|+|+...++++.++++.|+.+....|
T Consensus 48 nik~~~~~taPF~i~Wt~aNY~Yl~AL~~is~s~asai~~CNaAFVfiLa~IVL~D~~~~~kIlaailAI~GiVmiay~D 127 (290)
T KOG4314|consen 48 NIKLFFIRTAPFSIFWTGANYLYLLALKKISASDASAIFACNAAFVFILAIIVLGDRFMGFKILAAILAIGGIVMIAYAD 127 (290)
T ss_pred eeeeeeeeecceEEEEecCCcHHHHHHHhcChhhhHHHHHhhHHHHHHHHHHHhccchhhhhHHHHHHHhCcEEEEEecc
Confidence 33334455667778888899999999999999999999999999999999999999999999999999999999988655
Q ss_pred c--ccchhHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCChHHHHHHHhHHHHHHHHHHHHH-----hhchhhhhcCCCcc
Q 018749 161 A--KFDSWGVVLQLGAVAFEATRLVMIQILLTSKGITLNPITSLYYVAPCCLVFLLVPWIF-----VELPILRETSSFHF 233 (351)
Q Consensus 161 ~--~~~~~G~~~~l~s~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~-----~~~~~~~~~~~~~~ 233 (351)
. .+++.|+.++++|+...|+|.+..|+......-. +....+.-...+-.++...+.+. .|..+... ..
T Consensus 128 N~~a~e~iGi~~AV~SA~~aAlYKV~FK~~iGnAn~G-daa~FmS~LGF~NL~~~~~~~lIL~~T~VE~~qsFA----~~ 202 (290)
T KOG4314|consen 128 NEHADEIIGIACAVGSAFMAALYKVLFKMFIGNANFG-DAAHFMSCLGFFNLCFISFPALILAFTGVEHLQSFA----AA 202 (290)
T ss_pred chhhhhhhhHHHHHHHHHHHHHHHHHHHHHhccCcch-hHHHHHHHHHHHHHHHHhhhHHHHHHhchHHHHHHh----hC
Confidence 4 4679999999999999999999999987642111 22222221111112222111111 12222111 12
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHhhhhhHHHhhhhHhhcCCccchhhHHHHHHHHHhHhhhhhhh
Q 018749 234 DFVIFGTNSLCAFALNLAVFLLVGKTSALTMNVAGVVKDWLLIAFSWSVIKDTVTPINLFGYGLAFLGVAYYNHSK 309 (351)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~l~~v~~~~~~~~~~~e~~s~~~~~G~~li~~g~~l~~~~~ 309 (351)
.|..+.....+....|......+..+.|...|+-..........+..++=+-..+...++|..++.+|.++.-.+.
T Consensus 203 PWG~l~G~A~L~lAFN~~iN~GiaL~~PilISiG~l~~iP~NaaiDiL~q~l~~ntl~La~T~iI~i~FiLiiiP~ 278 (290)
T KOG4314|consen 203 PWGCLCGAAGLSLAFNFLINFGIALLNPILISIGMLCGIPGNAAIDILFQELEFNTLFLAATCIICIGFILIIIPE 278 (290)
T ss_pred CchhhhhHHHHHHHHhhheeehhhhhchhhheehheecCcchhHHHHHHHHHHHHHHHHHHHHHHHHhHHheeccc
Confidence 3555555566666667666677788889888887777777778888875555689999999999999998865443
No 37
>COG2510 Predicted membrane protein [Function unknown]
Probab=99.24 E-value=8.6e-11 Score=88.74 Aligned_cols=134 Identities=16% Similarity=0.086 Sum_probs=108.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhcccccccccHHHHHHHHHHHHHHHHHHHHHHhcccCCC-CCChhhHhHHHHHHHHHHH
Q 018749 19 YTYVAIWIFLSFTVIVYNKYILDKKMYNWPFPISLTMIHMSFCATLAFLLIKVFKFVEPV-TMSRDLYFSSVVPIGALYS 97 (351)
Q Consensus 19 ~~~~~~~~~~~~~~~~~~K~~l~~~~~~~~~p~~~~~~r~~~~~~~l~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~ 97 (351)
..|.....++.+--.++.|..+ ++.+ |.+.++.|..+....+..+....+..+.. ..+.|. +......|+.-+
T Consensus 5 ~~~ALLsA~fa~L~~iF~KIGl----~~vd-p~~At~IRtiVi~~~l~~v~~~~g~~~~~~~~~~k~-~lflilSGla~g 78 (140)
T COG2510 5 IIYALLSALFAGLTPIFAKIGL----EGVD-PDFATTIRTIVILIFLLIVLLVTGNWQAGGEIGPKS-WLFLILSGLAGG 78 (140)
T ss_pred HHHHHHHHHHHHHHHHHHHHhc----cccC-ccHHHHHHHHHHHHHHHHHHHhcCceecccccCcce-ehhhhHHHHHHH
Confidence 3444555555566677899999 5888 99999999998888777776655554322 234444 345666778889
Q ss_pred HHHhhhhhhcccccHHHHHHHHHHHHHHHHHHHHHhccccccchhhHHHHHHHhhhheeee
Q 018749 98 LSLWLSNSAYIYLSVSFIQMLKALMPVAVYSIGVTFKKESFKSDTMCNMVSISVGVAIAAY 158 (351)
Q Consensus 98 ~~~~~~~~al~~~~~s~~~vi~~~~pi~~~ll~~~~~~e~~~~~~~~~~~l~~~Gv~l~~~ 158 (351)
++..+++.|++--++|.+.-+..++|+++.+++++++|||++..+|+|++++++|++++..
T Consensus 79 lswl~Yf~ALk~G~as~VvPldk~svvl~~lls~lfL~E~ls~~~~iG~~LI~~Gailvs~ 139 (140)
T COG2510 79 LSWLLYFRALKKGKASRVVPLDKTSVVLAVLLSILFLGERLSLPTWIGIVLIVIGAILVSL 139 (140)
T ss_pred HHHHHHHHHHhcCCcceEEEcccccHHHHHHHHHHHhcCCCCHHHHHHHHHHHhCeeeEec
Confidence 9999999999999999999999999999999999999999999999999999999988653
No 38
>COG2510 Predicted membrane protein [Function unknown]
Probab=99.14 E-value=5.1e-10 Score=84.61 Aligned_cols=134 Identities=14% Similarity=0.085 Sum_probs=101.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhcCCCCCChHHHHHHHhHHHHHHHHHHHHHhhchhhhhcCCCcchhHHHHHHHHHHHH
Q 018749 168 VVLQLGAVAFEATRLVMIQILLTSKGITLNPITSLYYVAPCCLVFLLVPWIFVELPILRETSSFHFDFVIFGTNSLCAFA 247 (351)
Q Consensus 168 ~~~~l~s~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (351)
.++++.+++++++..++.|--.+ +.||......-.....+++..........+..... ....|..++++++.+..
T Consensus 5 ~~~ALLsA~fa~L~~iF~KIGl~----~vdp~~At~IRtiVi~~~l~~v~~~~g~~~~~~~~-~~k~~lflilSGla~gl 79 (140)
T COG2510 5 IIYALLSALFAGLTPIFAKIGLE----GVDPDFATTIRTIVILIFLLIVLLVTGNWQAGGEI-GPKSWLFLILSGLAGGL 79 (140)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcc----ccCccHHHHHHHHHHHHHHHHHHHhcCceeccccc-CcceehhhhHHHHHHHH
Confidence 58899999999999999998766 45666655555555544444333333322221111 12235667788888888
Q ss_pred HHHHHHHHHhcchhHHHHHHhhhhhHHHhhhhHhhcCCccchhhHHHHHHHHHhHhhhh
Q 018749 248 LNLAVFLLVGKTSALTMNVAGVVKDWLLIAFSWSVIKDTVTPINLFGYGLAFLGVAYYN 306 (351)
Q Consensus 248 ~~~~~~~~~~~~~~~~~s~~~~l~~v~~~~~~~~~~~e~~s~~~~~G~~li~~g~~l~~ 306 (351)
...++|++++.-.+....-.+-..+++++++|++++||++|..+++|+.++.+|..+..
T Consensus 80 swl~Yf~ALk~G~as~VvPldk~svvl~~lls~lfL~E~ls~~~~iG~~LI~~Gailvs 138 (140)
T COG2510 80 SWLLYFRALKKGKASRVVPLDKTSVVLAVLLSILFLGERLSLPTWIGIVLIVIGAILVS 138 (140)
T ss_pred HHHHHHHHHhcCCcceEEEcccccHHHHHHHHHHHhcCCCCHHHHHHHHHHHhCeeeEe
Confidence 88889999999999999999999999999999999999999999999999999987643
No 39
>PF00892 EamA: EamA-like transporter family; InterPro: IPR000620 This domain is found in proteins including the Erwinia chrysanthemi PecM protein, which is involved in pectinase, cellulase and blue pigment regulation; and the Salmonella typhimurium PagO protein, the function of which is unknown. Many members of this family are classed as drug/metabolite transporters and have no known function. They are predicted to be integral membrane proteins and many of the proteins contain two copies of this domain [].; GO: 0016020 membrane
Probab=99.13 E-value=5.1e-10 Score=87.72 Aligned_cols=125 Identities=14% Similarity=0.114 Sum_probs=94.6
Q ss_pred HHHHHHHHHHHHHhhcCCCCCChHHHHHHHhHHHHHHHHHHHHHhhchhhhhcCCCcchhHHHHHHHHHHHHHHHHHHHH
Q 018749 176 AFEATRLVMIQILLTSKGITLNPITSLYYVAPCCLVFLLVPWIFVELPILRETSSFHFDFVIFGTNSLCAFALNLAVFLL 255 (351)
Q Consensus 176 ~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (351)
++||.+.++.|+..+ +.|+.....+....+.+ .++.....+... ....+.......+..+.+.....+...+.+
T Consensus 1 ~~~a~~~~~~k~~~~----~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a 74 (126)
T PF00892_consen 1 FSWAIYSVFSKKLLK----KISPLSITFWRFLIAGI-LLILLLILGRKP-FKNLSPRQWLWLLFLGLLGTALAYLLYFYA 74 (126)
T ss_pred ceeeeHHHHHHHHhc----cCCHHHHHHHHHHHHHH-HHHHHHhhcccc-ccCCChhhhhhhhHhhccceehHHHHHHHH
Confidence 468899999999877 36899999999988887 554444433322 111111121233444444456666777889
Q ss_pred HhcchhHHHHHHhhhhhHHHhhhhHhhcCCccchhhHHHHHHHHHhHhhhh
Q 018749 256 VGKTSALTMNVAGVVKDWLLIAFSWSVIKDTVTPINLFGYGLAFLGVAYYN 306 (351)
Q Consensus 256 ~~~~~~~~~s~~~~l~~v~~~~~~~~~~~e~~s~~~~~G~~li~~g~~l~~ 306 (351)
+++.++...+...+++|+++.++++++++|++++.+++|+.+++.|+.+..
T Consensus 75 ~~~~~~~~~~~~~~~~pv~~~i~~~~~~~e~~~~~~~~g~~l~~~g~~l~~ 125 (126)
T PF00892_consen 75 LKYISASIVSILQYLSPVFAAILGWLFLGERPSWRQIIGIILIIIGVVLIS 125 (126)
T ss_pred HHhcchhHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999998753
No 40
>PF06800 Sugar_transport: Sugar transport protein; InterPro: IPR010651 This is a family of bacterial sugar transporters approximately 300 residues long. Members include glucose uptake proteins [], ribose transport proteins, and several putative and hypothetical membrane proteins probably involved in sugar transport across bacterial membranes.; GO: 0015144 carbohydrate transmembrane transporter activity, 0034219 carbohydrate transmembrane transport, 0016021 integral to membrane
Probab=99.11 E-value=2.4e-08 Score=87.30 Aligned_cols=207 Identities=17% Similarity=0.073 Sum_probs=152.0
Q ss_pred hHHHHHHHHHHHHHHhhhhhhcccccHHHHHHHH-HHHHHHHHHHHHHhccccccchhhH----HHHHHHhhhheeeecC
Q 018749 86 FSSVVPIGALYSLSLWLSNSAYIYLSVSFIQMLK-ALMPVAVYSIGVTFKKESFKSDTMC----NMVSISVGVAIAAYGE 160 (351)
Q Consensus 86 ~~~~~~~~l~~~~~~~~~~~al~~~~~s~~~vi~-~~~pi~~~ll~~~~~~e~~~~~~~~----~~~l~~~Gv~l~~~~~ 160 (351)
+...++.|++.+.....++.|++++.+|.+.=+. ...-+.+.++++++++|..+..+++ ++++.++|+.+....|
T Consensus 45 ~~~~~lsG~~W~iGq~~qf~s~~~~GVS~tmPiStg~QLvg~sl~gv~~fgEW~~~~~~~~G~~Al~liiiGv~lts~~~ 124 (269)
T PF06800_consen 45 FIVAFLSGAFWAIGQIGQFKSFKKIGVSKTMPISTGLQLVGTSLIGVLFFGEWTTTTQKIIGFLALVLIIIGVILTSYQD 124 (269)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcceeeeccchhHHHHHHHHHHHhhcCCCCCcchHHHHHHHHHHHHHHHHHhcccc
Confidence 4567788999999999999999999988777665 5667778999999999988877744 8889999999877654
Q ss_pred cc--------cchhHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCChHHHHHHHhHHHHHHHHHHHHHhhchhhhhcCCCc
Q 018749 161 AK--------FDSWGVVLQLGAVAFEATRLVMIQILLTSKGITLNPITSLYYVAPCCLVFLLVPWIFVELPILRETSSFH 232 (351)
Q Consensus 161 ~~--------~~~~G~~~~l~s~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 232 (351)
.+ ....|++..+++.+.|..|.+..|-. +.+++....-+..-..+...+..... .....+
T Consensus 125 ~~~~~~~~~~~~~kgi~~Ll~stigy~~Y~~~~~~~------~~~~~~~~lPqaiGm~i~a~i~~~~~-~~~~~~----- 192 (269)
T PF06800_consen 125 KKSDKSSSKSNMKKGILALLISTIGYWIYSVIPKAF------HVSGWSAFLPQAIGMLIGAFIFNLFS-KKPFFE----- 192 (269)
T ss_pred ccccccccccchhhHHHHHHHHHHHHHHHHHHHHhc------CCChhHhHHHHHHHHHHHHHHHhhcc-cccccc-----
Confidence 32 12569999999999999999997763 45777766644432222222222211 111111
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHhhhhhHHHhhhhHhhcCCccchh----hHHHHHHHHHhHhh
Q 018749 233 FDFVIFGTNSLCAFALNLAVFLLVGKTSALTMNVAGVVKDWLLIAFSWSVIKDTVTPI----NLFGYGLAFLGVAY 304 (351)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~l~~v~~~~~~~~~~~e~~s~~----~~~G~~li~~g~~l 304 (351)
..-+.-+.+++.--..|.+++...++.+..+.=.++.+..+++.+.|.++++|+=+.. .++|.++++.|..+
T Consensus 193 k~~~~nil~G~~w~ignl~~~is~~~~G~a~af~lSQ~~vvIStlgGI~il~E~Kt~ke~~~~~~G~~Liv~G~il 268 (269)
T PF06800_consen 193 KKSWKNILTGLIWGIGNLFYLISAQKNGVATAFTLSQLGVVISTLGGIFILKEKKTKKEMIYTLIGLILIVIGAIL 268 (269)
T ss_pred cchHHhhHHHHHHHHHHHHHHHhHHhccchhhhhHHhHHHHHHHhhhheEEEecCchhhHHHHHHHHHHHHHhhhc
Confidence 1123445566666666777778888999999999999999999999999999997755 56788888877654
No 41
>PF13536 EmrE: Multidrug resistance efflux transporter
Probab=99.10 E-value=3.5e-10 Score=87.27 Aligned_cols=106 Identities=15% Similarity=0.266 Sum_probs=79.7
Q ss_pred HHHHHHHHHHHHHHHHHhcccCC--CCCChhhHhHHHHHHHHH-HHHHHhhhhhhcccccHHHHHHHHHHHHHHHHHHHH
Q 018749 55 MIHMSFCATLAFLLIKVFKFVEP--VTMSRDLYFSSVVPIGAL-YSLSLWLSNSAYIYLSVSFIQMLKALMPVAVYSIGV 131 (351)
Q Consensus 55 ~~r~~~~~~~l~~~~~~~~~~~~--~~~~~~~~~~~~~~~~l~-~~~~~~~~~~al~~~~~s~~~vi~~~~pi~~~ll~~ 131 (351)
.+|++.+.+.+..+....++.++ +...++. +...+..++. ....+.++++|+++.| +.+..+.++.|+++.+++.
T Consensus 2 a~r~~~~~l~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~~~~~~a~~~~~-~~v~~i~~~~pi~~~ll~~ 79 (113)
T PF13536_consen 2 AFRYLFSVLFLLIILLIRGRLRDLFRALRRKP-WLWLILAGLLGFGVAYLLFFYALSYAP-ALVAAIFSLSPIFTALLSW 79 (113)
T ss_pred HHHHHHHHHHHHHHHHHHccHHHHHHHHHhCc-HHHHHHHHHHHHHHHHHHHHHHHHhCc-HHHHHHHHHHHHHHHHHHH
Confidence 47888888777666554332211 1112222 2234444554 4588999999999999 5888999999999999999
Q ss_pred HhccccccchhhHHHHHHHhhhheeeecCcc
Q 018749 132 TFKKESFKSDTMCNMVSISVGVAIAAYGEAK 162 (351)
Q Consensus 132 ~~~~e~~~~~~~~~~~l~~~Gv~l~~~~~~~ 162 (351)
+++|||++++++.+++++++|++++..++.+
T Consensus 80 ~~~~er~~~~~~~a~~l~~~Gv~li~~~~~~ 110 (113)
T PF13536_consen 80 LFFKERLSPRRWLAILLILIGVILIAWSDLT 110 (113)
T ss_pred HHhcCCCCHHHHHHHHHHHHHHHHHhhhhcc
Confidence 9999999999999999999999998876643
No 42
>TIGR00950 2A78 Carboxylate/Amino Acid/Amine Transporter.
Probab=98.84 E-value=1.5e-07 Score=83.73 Aligned_cols=130 Identities=12% Similarity=-0.062 Sum_probs=94.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhcccccccc-cHHHHHHHHHHHHHHHHHHHHHHhcccCCCCCChhhHhHHHHHHHHHH
Q 018749 18 SYTYVAIWIFLSFTVIVYNKYILDKKMYNWP-FPISLTMIHMSFCATLAFLLIKVFKFVEPVTMSRDLYFSSVVPIGALY 96 (351)
Q Consensus 18 ~~~~~~~~~~~~~~~~~~~K~~l~~~~~~~~-~p~~~~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 96 (351)
...+..+..++........|...+ +.+ .+.....+|+.++.+.+.+.....+. ....+.+.+........+..
T Consensus 129 G~~~~l~a~~~~a~~~~~~k~~~~----~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~ 202 (260)
T TIGR00950 129 GLLLGLGSGISFALGTVLYKRLVK----KEGPELLQFTGWVLLLGALLLLPFAWFLGP--NPQALSLQWGALLYLGLIGT 202 (260)
T ss_pred HHHHHHHHHHHHHHHHHHHhHHhh----cCCchHHHHHHHHHHHHHHHHHHHHHhcCC--CCCcchHHHHHHHHHHHHHH
Confidence 344445555555666667888874 333 14455667898888877776553322 22224444322233334445
Q ss_pred HHHHhhhhhhcccccHHHHHHHHHHHHHHHHHHHHHhccccccchhhHHHHHHHhhh
Q 018749 97 SLSLWLSNSAYIYLSVSFIQMLKALMPVAVYSIGVTFKKESFKSDTMCNMVSISVGV 153 (351)
Q Consensus 97 ~~~~~~~~~al~~~~~s~~~vi~~~~pi~~~ll~~~~~~e~~~~~~~~~~~l~~~Gv 153 (351)
.....+++.++++.+++.++++.++.|++.+++++++++|+++..++.|+++.++|+
T Consensus 203 ~~~~~~~~~a~~~~~~~~~s~~~~~~pv~~~ll~~~~~~E~~~~~~~~G~~li~~g~ 259 (260)
T TIGR00950 203 ALAYFLWNKGLTLVDPSAASILALAEPLVALLLGLLILGETLSLPQLIGGALIIAAV 259 (260)
T ss_pred HHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHhc
Confidence 788899999999999999999999999999999999999999999999999999986
No 43
>PRK15430 putative chloramphenical resistance permease RarD; Provisional
Probab=98.79 E-value=2.8e-07 Score=83.64 Aligned_cols=138 Identities=12% Similarity=0.082 Sum_probs=105.2
Q ss_pred cchhHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCChHHHHHHHhHHHHHHHHHHHHHhhc-hhhh-hcCCCcchhHHHHH
Q 018749 163 FDSWGVVLQLGAVAFEATRLVMIQILLTSKGITLNPITSLYYVAPCCLVFLLVPWIFVEL-PILR-ETSSFHFDFVIFGT 240 (351)
Q Consensus 163 ~~~~G~~~~l~s~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~-~~~~-~~~~~~~~~~~~~~ 240 (351)
....|.++.+.++++|+...+..|.. . +.++.+...+...++.+++++....... .... ...++ ..+.....
T Consensus 5 ~~~~g~~~~l~a~~~wg~~~~~~k~~-~----~~~~~~~~~~R~~~a~~~l~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 78 (296)
T PRK15430 5 QTRQGVLLALAAYFIWGIAPAYFKLI-Y----YVPADEILTHRVIWSFFFMVVLMSICRQWSYLKTLIQTP-QKIFMLAV 78 (296)
T ss_pred hhhhHHHHHHHHHHHHHHHHHHHHHh-c----CCCHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHcCH-HHHHHHHH
Confidence 34679999999999999999999764 2 4689999999999888766554432221 1110 01111 11223334
Q ss_pred HHHHHHHHHHHHHHHHhcchhHHHHHHhhhhhHHHhhhhHhhcCCccchhhHHHHHHHHHhHhhhh
Q 018749 241 NSLCAFALNLAVFLLVGKTSALTMNVAGVVKDWLLIAFSWSVIKDTVTPINLFGYGLAFLGVAYYN 306 (351)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~s~~~~l~~v~~~~~~~~~~~e~~s~~~~~G~~li~~g~~l~~ 306 (351)
+++.....+.+.++.++++++...++..+..|++..++++++++|+++..+++|.++.++|+.+..
T Consensus 79 ~~~~~~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~v~l~~~~~l~E~~~~~~~~g~~l~~~Gv~li~ 144 (296)
T PRK15430 79 SAVLIGGNWLLFIWAVNNHHMLEASLGYFINPLVNIVLGMIFLGERFRRMQWLAVILAICGVLVQL 144 (296)
T ss_pred HHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHH
Confidence 555555566778899999999999999999999999999999999999999999999999998754
No 44
>TIGR00688 rarD rarD protein. This uncharacterized protein is predicted to have many membrane-spanning domains.
Probab=98.78 E-value=3.9e-07 Score=80.93 Aligned_cols=136 Identities=13% Similarity=0.061 Sum_probs=103.8
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCChHHHHHHHhHHHHHHHHHHHHHhhchh----hhhcCCCcchhHHHHHH
Q 018749 166 WGVVLQLGAVAFEATRLVMIQILLTSKGITLNPITSLYYVAPCCLVFLLVPWIFVELPI----LRETSSFHFDFVIFGTN 241 (351)
Q Consensus 166 ~G~~~~l~s~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~ 241 (351)
.|+++.++++++|+...+..|.. . ..++.+..++-..++.+.+++......... ..........+..+...
T Consensus 2 ~g~~~~i~a~~~wg~~~~~~k~~-~----~~~~~~i~~~R~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 76 (256)
T TIGR00688 2 KGIIVSLLASFLFGYMYYYSKLL-K----PLPATDILGHRMIWSFPFMLLSVTLFRQWAALIERLKRIQKRPLILSLLLC 76 (256)
T ss_pred CcHHHHHHHHHHHHHHHHHHHHh-c----cCCHHHHHHHHHHHHHHHHHHHHHHHcchHHHHHHHhCcccchHHHHHHHH
Confidence 48899999999999999999973 3 379999999999888877655433222110 00001111123345555
Q ss_pred HHHHHHHHHHHHHHHhcchhHHHHHHhhhhhHHHhhhhHhhcCCccchhhHHHHHHHHHhHhhhh
Q 018749 242 SLCAFALNLAVFLLVGKTSALTMNVAGVVKDWLLIAFSWSVIKDTVTPINLFGYGLAFLGVAYYN 306 (351)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~s~~~~l~~v~~~~~~~~~~~e~~s~~~~~G~~li~~g~~l~~ 306 (351)
++.....+.+.+..++++++..+++..+..|+++.++++++++|+++..+++|..+.++|+.+..
T Consensus 77 g~~~~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~~~lla~~~l~Ek~~~~~~l~~~~~~~Gv~li~ 141 (256)
T TIGR00688 77 GLLIGFNWWLFIWAVNNGSSLEVSLGYLINPLVMVALGRVFLKERISRFQFIAVIIATLGVISNI 141 (256)
T ss_pred HHHHHHHHHHHHHHHHcchHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHH
Confidence 55566666778899999999999999999999999999999999999999999999999988653
No 45
>TIGR03340 phn_DUF6 phosphonate utilization associated putative membrane protein. This family of hydrophobic proteins has some homology to families of integral membrane proteins such as (pfam00892) and may be a permease. It occurs in the vicinity of various types of operons for the catabolism of phosphonates in Vibrio, Pseudomonas, Polaromonas and Thiomicrospira.
Probab=98.71 E-value=4.2e-07 Score=81.89 Aligned_cols=133 Identities=10% Similarity=0.069 Sum_probs=95.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhcCCCCCChHHHHHHHhHHHHHHHHHHHHHhhchhhhhcCCCcchhHHHHHHHHHHHH
Q 018749 168 VVLQLGAVAFEATRLVMIQILLTSKGITLNPITSLYYVAPCCLVFLLVPWIFVELPILRETSSFHFDFVIFGTNSLCAFA 247 (351)
Q Consensus 168 ~~~~l~s~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (351)
.++.+.+++++|.+.+..|+..+++ ++. ..+......+.+.+....... ...........+..+..+++....
T Consensus 3 ~~~~~~aa~~~a~~~~~~k~~~~~~----~~~--~~~~~~~~~~~l~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 75 (281)
T TIGR03340 3 LTLVVFSALMHAGWNLMAKSHADKE----PDF--LWWALLAHSVLLTPYGLWYLA-QVGWSRLPATFWLLLAISAVANMV 75 (281)
T ss_pred HHHHHHHHHHHHHHHHHHhhcCCch----hHH--HHHHHHHHHHHHHHHHHHhcc-cCCCCCcchhhHHHHHHHHHHHHH
Confidence 5678999999999999999875531 232 244444445555444432110 001111111224455566666777
Q ss_pred HHHHHHHHHhcchhHHHHHHhhhhhHHHhhhhHhhcCCccchhhHHHHHHHHHhHhhhhh
Q 018749 248 LNLAVFLLVGKTSALTMNVAGVVKDWLLIAFSWSVIKDTVTPINLFGYGLAFLGVAYYNH 307 (351)
Q Consensus 248 ~~~~~~~~~~~~~~~~~s~~~~l~~v~~~~~~~~~~~e~~s~~~~~G~~li~~g~~l~~~ 307 (351)
+..+.+...++.++...+.+.+..|+++.++++++++|+++..+++|..+++.|+.+...
T Consensus 76 ~~~~~~~a~~~~~~~~~~~l~~~~p~~~~l~~~~~~~e~~~~~~~~g~~~~~~Gv~ll~~ 135 (281)
T TIGR03340 76 YFLGLAQAYHHADVGLVYPLARSSPLLVAIWATLTLGETLSPLAWLGILIITLGLLVLGL 135 (281)
T ss_pred HHHHHHHHHhcCChhhhhhHHhhhHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHhc
Confidence 777788899999999999999999999999999999999999999999999999987653
No 46
>PRK11272 putative DMT superfamily transporter inner membrane protein; Provisional
Probab=98.55 E-value=2.3e-06 Score=77.55 Aligned_cols=133 Identities=8% Similarity=-0.076 Sum_probs=91.7
Q ss_pred HHHHHHHHHHHHHHHHHHhhcccccccccHHHHHHHHHHHHHHHHHHHHHHhcccCCCCCChhhHhHHHHHHHHHHHHHH
Q 018749 21 YVAIWIFLSFTVIVYNKYILDKKMYNWPFPISLTMIHMSFCATLAFLLIKVFKFVEPVTMSRDLYFSSVVPIGALYSLSL 100 (351)
Q Consensus 21 ~~~~~~~~~~~~~~~~K~~l~~~~~~~~~p~~~~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 100 (351)
+.+...+++.......|..-. . + +...+.+++.++...+.++............+.+.+........+......
T Consensus 154 ~~l~a~~~~a~~~~~~~~~~~----~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~i~~s~~~~ 227 (292)
T PRK11272 154 LILIASASWAFGSVWSSRLPL----P-V-GMMAGAAEMLAAGVVLLIASLLSGERLTALPTLSGFLALGYLAVFGSIIAI 227 (292)
T ss_pred HHHHHHHHHHHHHHHHHhcCC----C-c-chHHHHHHHHHHHHHHHHHHHHcCCcccccCCHHHHHHHHHHHHHHHHHHH
Confidence 333334444444455566431 2 2 455678898888877666554322111111233443332333333456788
Q ss_pred hhhhhhcccccHHHHHHHHHHHHHHHHHHHHHhccccccchhhHHHHHHHhhhheeeec
Q 018749 101 WLSNSAYIYLSVSFIQMLKALMPVAVYSIGVTFKKESFKSDTMCNMVSISVGVAIAAYG 159 (351)
Q Consensus 101 ~~~~~al~~~~~s~~~vi~~~~pi~~~ll~~~~~~e~~~~~~~~~~~l~~~Gv~l~~~~ 159 (351)
.+++.++++.+++.++++..+.|++.+++++++++|+++..+++|.+++++|+.+....
T Consensus 228 ~l~~~~~~~~~~~~~s~~~~l~Pi~a~i~~~~~l~E~~t~~~iiG~~lIi~gv~~~~~~ 286 (292)
T PRK11272 228 SAYMYLLRNVRPALATSYAYVNPVVAVLLGTGLGGETLSPIEWLALGVIVFAVVLVTLG 286 (292)
T ss_pred HHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHHHHHHH
Confidence 89999999999999999999999999999999999999999999999999999876543
No 47
>PLN00411 nodulin MtN21 family protein; Provisional
Probab=98.54 E-value=2.7e-06 Score=78.91 Aligned_cols=137 Identities=11% Similarity=0.049 Sum_probs=104.0
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCChHHHHHHHhHHHHHHHHHHHHHhhchhhhhcCCCcchhHHHHHHHHHH
Q 018749 166 WGVVLQLGAVAFEATRLVMIQILLTSKGITLNPITSLYYVAPCCLVFLLVPWIFVELPILRETSSFHFDFVIFGTNSLCA 245 (351)
Q Consensus 166 ~G~~~~l~s~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (351)
.-+..++..-++|+.+.++.|..++. ..++.....+-..++.+++++.....+.........+. .+..+.+.++++
T Consensus 13 ~~~~~~~~~q~~~~~~~~~~k~a~~~---G~~~~~~~~~R~~iA~l~Ll~~~~~~~~~~~~~~~~~~-~~~~l~l~g~~g 88 (358)
T PLN00411 13 VFLTAMLATETSVVGISTLFKVATSK---GLNIYPFLGYSYLLASLLLLPSLFFTNRSRSLPPLSVS-ILSKIGLLGFLG 88 (358)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHC---CCCccHHHHHHHHHHHHHHHHHHHHHHHhcccCcchHH-HHHHHHHHHHHH
Confidence 34677788889999999999999863 57888888888888888777665543321111111121 233344444444
Q ss_pred HHHHHHHHHHHhcchhHHHHHHhhhhhHHHhhhhHhh------cCCccchhhHHHHHHHHHhHhhhh
Q 018749 246 FALNLAVFLLVGKTSALTMNVAGVVKDWLLIAFSWSV------IKDTVTPINLFGYGLAFLGVAYYN 306 (351)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~s~~~~l~~v~~~~~~~~~------~~e~~s~~~~~G~~li~~g~~l~~ 306 (351)
..++...+..++++++..++++.++.|+++.++++++ ++|+++..+++|.++.++|+.+..
T Consensus 89 ~~~~~~~~~gl~~tsa~~asll~~~~P~~~~lla~~~~~e~~~~~er~~~~~~~G~~l~~~Gv~ll~ 155 (358)
T PLN00411 89 SMYVITGYIGIEYSNPTLASAISNITPALTFILAIIFRMEKVSFKERSSVAKVMGTILSLIGALVVI 155 (358)
T ss_pred HHHHHHHHHHHhhccHHHHHHHHHhhHHHHHHHHHHHHhchhhhcccccHHHHHHHHHHHHHHHHHH
Confidence 5566677889999999999999999999999999999 699999999999999999998754
No 48
>PRK10532 threonine and homoserine efflux system; Provisional
Probab=98.48 E-value=6.1e-06 Score=74.79 Aligned_cols=131 Identities=11% Similarity=-0.016 Sum_probs=91.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhcccccccccHHHHHHHHHHHHHHHHHHHHHHhcccCCCCCChhhHhHHHHHHHHH-H
Q 018749 18 SYTYVAIWIFLSFTVIVYNKYILDKKMYNWPFPISLTMIHMSFCATLAFLLIKVFKFVEPVTMSRDLYFSSVVPIGAL-Y 96 (351)
Q Consensus 18 ~~~~~~~~~~~~~~~~~~~K~~l~~~~~~~~~p~~~~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~ 96 (351)
...+.+.-.++........|...+ +.+ |.... +...++.+++.++...... ....++..+ ...+..+++ .
T Consensus 149 G~ll~l~aa~~~a~~~v~~r~~~~----~~~-~~~~~-~~~~~~~~~l~~~~~~~~~--~~~~~~~~~-~~~l~lgv~~t 219 (293)
T PRK10532 149 GAALALGAGACWAIYILSGQRAGA----EHG-PATVA-IGSLIAALIFVPIGALQAG--EALWHWSIL-PLGLAVAILST 219 (293)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhc----cCC-chHHH-HHHHHHHHHHHHHHHHccC--cccCCHHHH-HHHHHHHHHHH
Confidence 344445555555666667777763 455 66554 4555666655555442221 122233322 222233433 5
Q ss_pred HHHHhhhhhhcccccHHHHHHHHHHHHHHHHHHHHHhccccccchhhHHHHHHHhhhheee
Q 018749 97 SLSLWLSNSAYIYLSVSFIQMLKALMPVAVYSIGVTFKKESFKSDTMCNMVSISVGVAIAA 157 (351)
Q Consensus 97 ~~~~~~~~~al~~~~~s~~~vi~~~~pi~~~ll~~~~~~e~~~~~~~~~~~l~~~Gv~l~~ 157 (351)
.+.+.+++.++++++++.++.+.++.|++..++++++++|+++..+++|.+++++|++...
T Consensus 220 ~~~~~l~~~~~~~~~a~~as~~~~l~Pv~a~l~~~l~lgE~~~~~~~iG~~lIl~~~~~~~ 280 (293)
T PRK10532 220 ALPYSLEMIALTRLPTRTFGTLMSMEPALAAVSGMIFLGETLTLIQWLALGAIIAASMGST 280 (293)
T ss_pred HHHHHHHHHHHHhcChhHHHHHHHhHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHH
Confidence 7788899999999999999999999999999999999999999999999999999988754
No 49
>PRK15051 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE; Provisional
Probab=98.47 E-value=3.4e-06 Score=64.44 Aligned_cols=64 Identities=20% Similarity=0.149 Sum_probs=60.2
Q ss_pred HHHHHHHhhhhhhcccccHHHHHHHHHHHHHHHHHHHHHhccccccchhhHHHHHHHhhhheee
Q 018749 94 ALYSLSLWLSNSAYIYLSVSFIQMLKALMPVAVYSIGVTFKKESFKSDTMCNMVSISVGVAIAA 157 (351)
Q Consensus 94 l~~~~~~~~~~~al~~~~~s~~~vi~~~~pi~~~ll~~~~~~e~~~~~~~~~~~l~~~Gv~l~~ 157 (351)
++++....+...+++.+|.+.+..+-++.++++.+++++++|||++.+|++|+.++++|++++.
T Consensus 45 ~~~~l~~~~~~~al~~iplg~Ay~~~~l~~v~~~~~~~l~f~E~ls~~~~~Gi~lii~Gv~~i~ 108 (111)
T PRK15051 45 ACLGLAMVLWLLVLQNVPVGIAYPMLSLNFVWVTLAAVKLWHEPVSPRHWCGVAFIIGGIVILG 108 (111)
T ss_pred HHHHHHHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHh
Confidence 5578899999999999999999999999999999999999999999999999999999998754
No 50
>PRK13499 rhamnose-proton symporter; Provisional
Probab=98.43 E-value=0.0002 Score=65.49 Aligned_cols=282 Identities=13% Similarity=0.043 Sum_probs=161.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhcccccccccHHHHHHHHHHHHHHHHHHHHHHhccc---C-CCCCChhhHhHHHH
Q 018749 15 ILLSYTYVAIWIFLSFTVIVYNKYILDKKMYNWPFPISLTMIHMSFCATLAFLLIKVFKFV---E-PVTMSRDLYFSSVV 90 (351)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~K~~l~~~~~~~~~p~~~~~~r~~~~~~~l~~~~~~~~~~---~-~~~~~~~~~~~~~~ 90 (351)
....+..+.+-.++++++..-.|..= +.++. .++. ...+++.+++-...-....+ . -...+.+. +...+
T Consensus 5 ~~~G~~~~~i~~~~~GS~~~p~K~~k---~w~wE-~~W~--v~gi~~wl~~~~~~g~~~~~~f~~~~~~~~~~~-~~~~~ 77 (345)
T PRK13499 5 IILGIIWHLIGGASSGSFYAPFKKVK---KWSWE-TMWS--VGGIFSWLILPWLIAALLLPDFWAYYSSFSGST-LLPVF 77 (345)
T ss_pred hHHHHHHHHHHHHHhhcccccccccC---CCchh-HHHH--HHHHHHHHHHHHHHHHHHhhhHHHHHHhcCHHH-HHHHH
Confidence 44566667777777777777777732 23443 2222 11112222221111001100 0 11233333 45577
Q ss_pred HHHHHHHHHHhhhhhhcccccHHHHHHHH-HHHHHHHHHHHHHhccccc---cc----hhhHHHHHHHhhhheeee----
Q 018749 91 PIGALYSLSLWLSNSAYIYLSVSFIQMLK-ALMPVAVYSIGVTFKKESF---KS----DTMCNMVSISVGVAIAAY---- 158 (351)
Q Consensus 91 ~~~l~~~~~~~~~~~al~~~~~s~~~vi~-~~~pi~~~ll~~~~~~e~~---~~----~~~~~~~l~~~Gv~l~~~---- 158 (351)
+.|++.+..+..+..+++|+.+|...-+. .+.-+...++..++++|-. +. .-.++++++++|+++...
T Consensus 78 l~G~~W~iG~i~~~~s~~~iGvS~~~pIs~Gl~lv~gtL~~~i~~gew~~~~~t~~g~~~~~gv~liliGi~l~s~Ag~~ 157 (345)
T PRK13499 78 LFGALWGIGGITYGLTMRYLGMSLGIGIAIGITLIVGTLMPPIINGNFDVLLATNGGRMTLLGVLVALIGVAIVGRAGQL 157 (345)
T ss_pred HHHHHHHhhhhhHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHccccccccccchHHHHHHHHHHHHHHHHHHHHhhhh
Confidence 78899999999999999999999887776 6777888888888888643 22 347889999999998766
Q ss_pred cCcc---------cchhHHHHHHHHHHHHHHHH-------HHHHHHhhcCCCCCChHHHHHHHhH---HHHHHHHHHHHH
Q 018749 159 GEAK---------FDSWGVVLQLGAVAFEATRL-------VMIQILLTSKGITLNPITSLYYVAP---CCLVFLLVPWIF 219 (351)
Q Consensus 159 ~~~~---------~~~~G~~~~l~s~~~~a~~~-------v~~~~~~~~~~~~~~~~~~~~~~~~---~~~i~~~~~~~~ 219 (351)
+|.+ ....|++.++++.+.++.|. ...+.... ...++.....-+.. .+....-.....
T Consensus 158 k~~~~~~~~~~~~~~~KGi~ialisgi~~~~f~~~~~~~~~~~~~a~~---~g~~~~~~~lp~~~~~~~G~~~~n~~~~~ 234 (345)
T PRK13499 158 KERKMGIKKAEEFNLKKGLILAVMSGIFSACFSFAMDAGKPMHEAAAA---LGVDPLYAALPSYVVIMGGGAITNLGFCF 234 (345)
T ss_pred cccccccccccccchHhHHHHHHHHHHHHHHHHHHHhhccchhhhhhh---cCCCchHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3321 12579999999999999999 33332211 12344333322222 222211111111
Q ss_pred h---hchhh---hhcCCC----cchhHHHHHHHHHHHHHHHHHHHHHhcchhH----HHHHHhhhhhHHHhhhhHhhcCC
Q 018749 220 V---ELPIL---RETSSF----HFDFVIFGTNSLCAFALNLAVFLLVGKTSAL----TMNVAGVVKDWLLIAFSWSVIKD 285 (351)
Q Consensus 220 ~---~~~~~---~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~s~~~~l~~v~~~~~~~~~~~e 285 (351)
. ..... .+.... ..-....+++++.-+..+..+...-++.+.. ...+...+..+++.+.|.+ ++|
T Consensus 235 ~~~~k~~~~~~~~~~~~~~~~~~~n~l~~~l~G~~W~~~~~~y~~~~~~~g~~~~~~sw~l~m~~~ViistlwGi~-lkE 313 (345)
T PRK13499 235 IRLAKNKDLSLKADFSLAKPLLITNVLLSALAGVMWYLQFFFYAMGHSKLGAQYDFVSWMLHMSFYVLCGNLWGLV-LKE 313 (345)
T ss_pred HHHhhCCCcccchhccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccchHHHHHhccHHHHHHHHhhhh-hhh
Confidence 1 11111 111110 1112333555555555555555555555332 2334446777899999994 999
Q ss_pred ccc------hhhHHHHHHHHHhHhhhhh
Q 018749 286 TVT------PINLFGYGLAFLGVAYYNH 307 (351)
Q Consensus 286 ~~s------~~~~~G~~li~~g~~l~~~ 307 (351)
.=+ ...++|.+++++|..+...
T Consensus 314 ~K~a~~k~~~~l~~G~vliI~g~~lig~ 341 (345)
T PRK13499 314 WKGASRRPVRVLSLGCVVIILAANIVGL 341 (345)
T ss_pred ccCCCccchhHHHHHHHHHHHHHHHHhh
Confidence 866 6679999999999887543
No 51
>PRK02971 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF; Provisional
Probab=98.36 E-value=2.7e-05 Score=61.07 Aligned_cols=121 Identities=11% Similarity=-0.046 Sum_probs=82.2
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCChHHHHHHHhHHHHHHHHHHHHHhhchhhhhcCCCcchhHHHHHHHHHH
Q 018749 166 WGVVLQLGAVAFEATRLVMIQILLTSKGITLNPITSLYYVAPCCLVFLLVPWIFVELPILRETSSFHFDFVIFGTNSLCA 245 (351)
Q Consensus 166 ~G~~~~l~s~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (351)
.|+++.+.+.++.+...++.|+-+++.+. .+... . . ... .....++ ...+..+.++.
T Consensus 2 ~~~~~i~~sv~l~~~gQl~~K~g~~~~g~-~~~~~---~-~-~~~-----~~~~~~p------------~~~i~lgl~~~ 58 (129)
T PRK02971 2 MGYLWGLASVLLASVAQLSLKWGMSRLPL-LSHAW---D-F-IAA-----LLAFGLA------------LRAVLLGLAGY 58 (129)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHhhCCC-ccchh---H-H-HHH-----HHHHhcc------------HHHHHHHHHHH
Confidence 47899999999999999999988775331 11100 0 0 000 0000010 11233344444
Q ss_pred HHHHHHHHHHHhcchhHHHHHHhhhhhHHHhhhhHh--hcCCccchhhHHHHHHHHHhHhhhhhhh
Q 018749 246 FALNLAVFLLVGKTSALTMNVAGVVKDWLLIAFSWS--VIKDTVTPINLFGYGLAFLGVAYYNHSK 309 (351)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~s~~~~l~~v~~~~~~~~--~~~e~~s~~~~~G~~li~~g~~l~~~~~ 309 (351)
......+...+++.+...+.....+.++...+.++. +|||++|+.+++|..++++|+++.+..+
T Consensus 59 ~la~~~w~~aL~~~~ls~Ayp~~sl~~~~v~~~~~~~~~~~E~ls~~~~iGi~lIi~GV~lv~~~~ 124 (129)
T PRK02971 59 ALSMLCWLKALRYLPLSRAYPLLSLSYALVYLAAMLLPWFNETFSLKKTLGVACIMLGVWLINLPT 124 (129)
T ss_pred HHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHhccCC
Confidence 444456678899999999888888888777777774 8999999999999999999999976543
No 52
>PF03151 TPT: Triose-phosphate Transporter family; InterPro: IPR004853 This family consists entirely of aligned regions from Drosophila melanogaster proteins. O49724 from SWISSPROT contains three repeats of this region. In other proteins, the aligned region is located towards the C terminus. The function of the aligned region is unknown.
Probab=98.34 E-value=3.1e-05 Score=62.85 Aligned_cols=136 Identities=17% Similarity=0.079 Sum_probs=103.7
Q ss_pred HHHHHHHHHHHHHHHHHHhhccc---ccccccHHHHHHHHHHHHHHHHHHHHHHhcccCCCC----C-----C-hhhHhH
Q 018749 21 YVAIWIFLSFTVIVYNKYILDKK---MYNWPFPISLTMIHMSFCATLAFLLIKVFKFVEPVT----M-----S-RDLYFS 87 (351)
Q Consensus 21 ~~~~~~~~~~~~~~~~K~~l~~~---~~~~~~p~~~~~~r~~~~~~~l~~~~~~~~~~~~~~----~-----~-~~~~~~ 87 (351)
++....++.+.-....|..++++ ..+.+ |..+..+....+.+.+.+.....+..+..+ . . ..+...
T Consensus 4 ~~l~s~~~~al~~v~~~~~~~~~~~~~~~~~-~~~l~~~~~~~s~~~l~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~ 82 (153)
T PF03151_consen 4 LALASSLFSALRNVLIKKLLKKVSSNSKKLN-PLNLLYYNSPISFIILLPLAFLLEGPQLSSFFSEIFGEELSSDPNFIF 82 (153)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcccccccCCC-HHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHhhhhhhcchHHHHH
Confidence 34455555666666778887631 24676 999999998888888888766544332110 1 1 223344
Q ss_pred HHHHHHHHHHHHHhhhhhhcccccHHHHHHHHHHHHHHHHHHHHHhccccccchhhHHHHHHHhhhheee
Q 018749 88 SVVPIGALYSLSLWLSNSAYIYLSVSFIQMLKALMPVAVYSIGVTFKKESFKSDTMCNMVSISVGVAIAA 157 (351)
Q Consensus 88 ~~~~~~l~~~~~~~~~~~al~~~~~s~~~vi~~~~pi~~~ll~~~~~~e~~~~~~~~~~~l~~~Gv~l~~ 157 (351)
.++..++.....+...+..++++++-..++......+.+.++++++++|+++..++.|++++++|+.+..
T Consensus 83 ~~~~~~~~~~~~n~~~f~~i~~tS~lt~~v~~~~K~~~~i~~s~~~f~~~~t~~~~~G~~l~~~G~~~Ys 152 (153)
T PF03151_consen 83 LLILSGLLAFLYNLSSFLLIKLTSPLTYSVLGNVKRILVILLSVIFFGEPITPLQIIGIVLALVGVLLYS 152 (153)
T ss_pred HHHHHHHHHHHHHHHHHHHhhhcChhHHHHHHHHHHHHHHHHHhhhcCCcCCHHHHHHHHHHHHHHheee
Confidence 5566677778889999999999999999999999999999999999999999999999999999998643
No 53
>PTZ00343 triose or hexose phosphate/phosphate translocator; Provisional
Probab=98.31 E-value=3.1e-05 Score=71.96 Aligned_cols=139 Identities=16% Similarity=0.107 Sum_probs=100.2
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCC-hHHHHHHHhHHHHHHHHHHHHHhhchhhhhcCCCcchhHHHHHHH
Q 018749 164 DSWGVVLQLGAVAFEATRLVMIQILLTSKGITLN-PITSLYYVAPCCLVFLLVPWIFVELPILRETSSFHFDFVIFGTNS 242 (351)
Q Consensus 164 ~~~G~~~~l~s~~~~a~~~v~~~~~~~~~~~~~~-~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (351)
++.-.++.+.--.+...++++.|..++. .+ |+.+..+.+..+.+...+.+... .........+...+..++..+
T Consensus 47 ~~~~~~~~~~wy~~s~~~~~~nK~vl~~----~~~P~~l~~~~~~~~~l~~~~~~~~~-~~~~~~~~~~~~~~~~llp~g 121 (350)
T PTZ00343 47 KWKLALLFLTWYALNVLYVVDNKLALNM----LPLPWTISSLQLFVGWLFALLYWATG-FRKIPRIKSLKLFLKNFLPQG 121 (350)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHh----CChhHHHHHHHHHHHHHHHHHHHHhC-CCCCCCCCCHHHHHHHHHHHH
Confidence 4444555555556667778889988873 46 99999999988876654443321 111000111222344555666
Q ss_pred HHHHHHHHHHHHHHhcchhHHHHHHhhhhhHHHhhhhHhhcCCccchhhHHHHHHHHHhHhhhhh
Q 018749 243 LCAFALNLAVFLLVGKTSALTMNVAGVVKDWLLIAFSWSVIKDTVTPINLFGYGLAFLGVAYYNH 307 (351)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~s~~~~l~~v~~~~~~~~~~~e~~s~~~~~G~~li~~g~~l~~~ 307 (351)
+++...+...+..++++++..+++...+.|+++++++.++++|+++..+++|.++++.|+.+...
T Consensus 122 l~~~~~~~~~~~sl~~~svs~~~iika~~Pvft~lls~~~l~ek~s~~~~l~l~l~v~Gv~l~~~ 186 (350)
T PTZ00343 122 LCHLFVHFGAVISMGLGAVSFTHVVKAAEPVFTALLSILFLKQFLNLYAYLSLIPIVGGVALASV 186 (350)
T ss_pred HHHHHHHHHHHHHHhhccHHHHHHHHHhhHHHHHHHHHHHhCCCccHHHHHHHHHHHHHHHheec
Confidence 66665555566888999999999999999999999999999999999999999999999998653
No 54
>TIGR00817 tpt Tpt phosphate/phosphoenolpyruvate translocator. specificities overlap.
Probab=98.22 E-value=9.3e-06 Score=73.91 Aligned_cols=137 Identities=7% Similarity=-0.021 Sum_probs=94.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhcccccccccHHHHHHHHHHHHHHHHHHHHHHhcccCCCC---------CChhhHhHH
Q 018749 18 SYTYVAIWIFLSFTVIVYNKYILDKKMYNWPFPISLTMIHMSFCATLAFLLIKVFKFVEPVT---------MSRDLYFSS 88 (351)
Q Consensus 18 ~~~~~~~~~~~~~~~~~~~K~~l~~~~~~~~~p~~~~~~r~~~~~~~l~~~~~~~~~~~~~~---------~~~~~~~~~ 88 (351)
...++.+..+++.......|...+ +.+++ |..++++++..+.+.+.++.......+... .........
T Consensus 146 G~~~~l~a~~~~a~~~v~~k~~~~--~~~~~-~~~~~~~~~~~~~~~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (302)
T TIGR00817 146 GFLSAMISNITFVSRNIFSKKAMT--IKSLD-KTNLYAYISIMSLFLLSPPAFITEGPPFLPHGFMQAISGVNVTKIYTV 222 (302)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhc--cCCCC-cccHHHHHHHHHHHHHHHHHHHHcchHHHHHHHHHhhcccCchHHHHH
Confidence 344455555555666667777763 12566 889999999988887777765332111000 010111111
Q ss_pred HHHHHH-HHHHHHhhhhhhcccccHHHHHHHHHHHHHHHHHHHHHhccccccchhhHHHHHHHhhhheee
Q 018749 89 VVPIGA-LYSLSLWLSNSAYIYLSVSFIQMLKALMPVAVYSIGVTFKKESFKSDTMCNMVSISVGVAIAA 157 (351)
Q Consensus 89 ~~~~~l-~~~~~~~~~~~al~~~~~s~~~vi~~~~pi~~~ll~~~~~~e~~~~~~~~~~~l~~~Gv~l~~ 157 (351)
.+..+. .+...+.+.+.+++++++..+++.....|++++++++++++|+++..+++|.+++++|+.+..
T Consensus 223 ~~~~~~~~~~~~~~~~~~~l~~~sa~t~sv~~~l~pv~~~~~~~~~lge~lt~~~~~G~~lil~Gv~l~~ 292 (302)
T TIGR00817 223 SLVAAMGFFHFYQQVAFMLLGRVSPLTHSVGNCMKRVVVIVVSILFFGTKISPQQVFGTGIAIAGVFLYS 292 (302)
T ss_pred HHHHHHHHHHHHHHHHHHHHccCCchHHHHHhhhhhhheeeeehhhcCCCCchhHHHHHHHHHHHHHHHH
Confidence 222222 344444567789999999999999999999999999999999999999999999999998754
No 55
>PRK11689 aromatic amino acid exporter; Provisional
Probab=98.22 E-value=4.6e-05 Score=69.15 Aligned_cols=131 Identities=10% Similarity=0.054 Sum_probs=88.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhcccccccccHHHHHHHHHHHHHHHHHHHHHHhcccCCCCCChhhHhHHHHHHHHHHH
Q 018749 18 SYTYVAIWIFLSFTVIVYNKYILDKKMYNWPFPISLTMIHMSFCATLAFLLIKVFKFVEPVTMSRDLYFSSVVPIGALYS 97 (351)
Q Consensus 18 ~~~~~~~~~~~~~~~~~~~K~~l~~~~~~~~~p~~~~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 97 (351)
...+.+...+++...++.+|..-+ +.+ |....+ . .+.+.+.+....... .....+.+.+ ...+..++..+
T Consensus 157 G~~~~l~aa~~~A~~~v~~k~~~~----~~~-~~~~~~--~-~~~~~l~~~~~~~~~-~~~~~~~~~~-~~l~~~~~~t~ 226 (295)
T PRK11689 157 SYGLAFIGAFIWAAYCNVTRKYAR----GKN-GITLFF--I-LTALALWIKYFLSPQ-PAMVFSLPAI-IKLLLAAAAMG 226 (295)
T ss_pred HHHHHHHHHHHHHHHHHHHhhccC----CCC-chhHHH--H-HHHHHHHHHHHHhcC-ccccCCHHHH-HHHHHHHHHHH
Confidence 334455555555666667777653 344 544322 2 222333332222221 1223444443 23444555567
Q ss_pred HHHhhhhhhcccccHHHHHHHHHHHHHHHHHHHHHhccccccchhhHHHHHHHhhhheeee
Q 018749 98 LSLWLSNSAYIYLSVSFIQMLKALMPVAVYSIGVTFKKESFKSDTMCNMVSISVGVAIAAY 158 (351)
Q Consensus 98 ~~~~~~~~al~~~~~s~~~vi~~~~pi~~~ll~~~~~~e~~~~~~~~~~~l~~~Gv~l~~~ 158 (351)
+.+.+++.++++.|++.++.+.++.|++..++++++++|+++..+++|.+++++|+.+...
T Consensus 227 ~~~~l~~~al~~~~a~~~s~~~~l~Pv~a~i~~~~~lgE~~~~~~~iG~~lI~~gv~~~~~ 287 (295)
T PRK11689 227 FGYAAWNVGILHGNMTLLATASYFTPVLSAALAALLLSTPLSFSFWQGVAMVTAGSLLCWL 287 (295)
T ss_pred HHHHHHHHHHHccCHHHHHHHHHhHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHhHHHHhh
Confidence 7899999999999999999999999999999999999999999999999999999877543
No 56
>PRK11453 O-acetylserine/cysteine export protein; Provisional
Probab=98.21 E-value=6.5e-05 Score=68.27 Aligned_cols=139 Identities=14% Similarity=0.065 Sum_probs=90.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhcccccccccHHHHHHHHHHHHHHHHHHHHHHhcccC-----CCCCChhhHhHHHHHH
Q 018749 18 SYTYVAIWIFLSFTVIVYNKYILDKKMYNWPFPISLTMIHMSFCATLAFLLIKVFKFVE-----PVTMSRDLYFSSVVPI 92 (351)
Q Consensus 18 ~~~~~~~~~~~~~~~~~~~K~~l~~~~~~~~~p~~~~~~r~~~~~~~l~~~~~~~~~~~-----~~~~~~~~~~~~~~~~ 92 (351)
...+...-..++....+..|...+ +..-+......++..+.+.+............. ....+.+.+.......
T Consensus 144 G~~l~l~aal~~a~~~v~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~ 221 (299)
T PRK11453 144 GFMLTLAAAFSWACGNIFNKKIMS--HSTRPAVMSLVVWSALIPIIPFFVASLILDGSATMIHSLVTIDMTTILSLMYLA 221 (299)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhc--ccCccchhHHHHHHHHHHHHHHHHHHHHhcCchhhhhhhccCCHHHHHHHHHHH
Confidence 344445555555566667777652 111111344456666655544333322121111 0123344433333333
Q ss_pred HHHHHHHHhhhhhhcccccHHHHHHHHHHHHHHHHHHHHHhccccccchhhHHHHHHHhhhheeee
Q 018749 93 GALYSLSLWLSNSAYIYLSVSFIQMLKALMPVAVYSIGVTFKKESFKSDTMCNMVSISVGVAIAAY 158 (351)
Q Consensus 93 ~l~~~~~~~~~~~al~~~~~s~~~vi~~~~pi~~~ll~~~~~~e~~~~~~~~~~~l~~~Gv~l~~~ 158 (351)
.+...+...+++.++++.+++.++.+..+.|++..++++++++|+++..+++|.+++++|+.+...
T Consensus 222 i~~t~~~~~l~~~~l~~~~a~~~s~~~~l~Pv~a~~~~~l~lgE~~~~~~~iG~~lI~~gv~l~~~ 287 (299)
T PRK11453 222 FVATIVGYGIWGTLLGRYETWRVAPLSLLVPVVGLASAALLLDERLTGLQFLGAVLIMAGLYINVF 287 (299)
T ss_pred HHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHhCCCccHHHHHHHHHHHHHHHHHhc
Confidence 344577888899999999999999999999999999999999999999999999999999987544
No 57
>PF05653 Mg_trans_NIPA: Magnesium transporter NIPA; InterPro: IPR008521 This family consists of several eukaryotic proteins of unknown function.
Probab=98.18 E-value=2.8e-05 Score=70.31 Aligned_cols=68 Identities=19% Similarity=0.092 Sum_probs=60.9
Q ss_pred HHHHHHHHHHhhhhhhcccccHHHHHHHHHHHHHHHHHHHHHhccccccchhhHHHHHHHhhhheeee
Q 018749 91 PIGALYSLSLWLSNSAYIYLSVSFIQMLKALMPVAVYSIGVTFKKESFKSDTMCNMVSISVGVAIAAY 158 (351)
Q Consensus 91 ~~~l~~~~~~~~~~~al~~~~~s~~~vi~~~~pi~~~ll~~~~~~e~~~~~~~~~~~l~~~Gv~l~~~ 158 (351)
.+-+.+..+..+.+.|+.+.|.+..+-+.+...++..+++..++|||++++++.|+.+++.|..++..
T Consensus 55 ~G~~~~~~g~~~~~~Al~~ap~slv~Plg~~~lv~~~~~a~~~l~e~~~~~~~~G~~l~i~G~~liv~ 122 (300)
T PF05653_consen 55 IGLLLMVLGEILNFVALGFAPASLVAPLGALSLVFNAVLARFFLGEKLTRRDIVGCALIILGSVLIVI 122 (300)
T ss_pred HHHHHHhcchHHHHHHHHhhhHHHHHHHHhhhhhhHHHHhHHHhcccchHhHHhhHHHHHhhheeeEE
Confidence 34445677888899999999999999999999999999999999999999999999999999887543
No 58
>PF13536 EmrE: Multidrug resistance efflux transporter
Probab=98.16 E-value=3.4e-05 Score=59.30 Aligned_cols=72 Identities=19% Similarity=0.270 Sum_probs=58.7
Q ss_pred HHHHHHHHH-HHHHHHHHHHhcchhHHHHHHhhhhhHHHhhhhHhhcCCccchhhHHHHHHHHHhHhhhhhhhh
Q 018749 238 FGTNSLCAF-ALNLAVFLLVGKTSALTMNVAGVVKDWLLIAFSWSVIKDTVTPINLFGYGLAFLGVAYYNHSKL 310 (351)
Q Consensus 238 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~s~~~~l~~v~~~~~~~~~~~e~~s~~~~~G~~li~~g~~l~~~~~~ 310 (351)
.+..+++.. ..+...+...++.++ ..+....+.|+++.+++.++++|+++..+++|..++++|+.+..+.+.
T Consensus 37 ~~~~g~~~~~~~~~~~~~a~~~~~~-~v~~i~~~~pi~~~ll~~~~~~er~~~~~~~a~~l~~~Gv~li~~~~~ 109 (113)
T PF13536_consen 37 LILAGLLGFGVAYLLFFYALSYAPA-LVAAIFSLSPIFTALLSWLFFKERLSPRRWLAILLILIGVILIAWSDL 109 (113)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCcH-HHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhhhhc
Confidence 333344333 555667788888885 777889999999999999999999999999999999999998776553
No 59
>COG2962 RarD Predicted permeases [General function prediction only]
Probab=98.02 E-value=0.00021 Score=62.63 Aligned_cols=138 Identities=14% Similarity=0.130 Sum_probs=102.1
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCChHHHHHHHhHHHHHHHHHHHHHhhc-hhhhhcCCCcchhHHHHHHH
Q 018749 164 DSWGVVLQLGAVAFEATRLVMIQILLTSKGITLNPITSLYYVAPCCLVFLLVPWIFVEL-PILRETSSFHFDFVIFGTNS 242 (351)
Q Consensus 164 ~~~G~~~~l~s~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 242 (351)
+..|+++++.+.+.|++-..+.|-+ + ..++.++..+-...+.+.++........ ........-...+..+..++
T Consensus 5 ~~~Gil~~l~Ay~lwG~lp~y~kll-~----~~~~~eIlahRviwS~~~~l~ll~~~r~~~~~~~~~~~p~~~~~~~l~a 79 (293)
T COG2962 5 SRKGILLALLAYLLWGLLPLYFKLL-E----PLPATEILAHRVIWSFPFMLALLFLLRQWRELKQLLKQPKTLLMLALTA 79 (293)
T ss_pred ccchhHHHHHHHHHHHHHHHHHHHH-c----cCCHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhCcHHHHHHHHHH
Confidence 4579999999999999999988876 2 4688899999888888877655433322 12211111112234444444
Q ss_pred HHHHHHHHHHHHHHhcchhHHHHHHhhhhhHHHhhhhHhhcCCccchhhHHHHHHHHHhHhhhh
Q 018749 243 LCAFALNLAVFLLVGKTSALTMNVAGVVKDWLLIAFSWSVIKDTVTPINLFGYGLAFLGVAYYN 306 (351)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~s~~~~l~~v~~~~~~~~~~~e~~s~~~~~G~~li~~g~~l~~ 306 (351)
+.-..-.....++..+-....+|.--+++|.+.+++|.++++|+++..|++...+..+|+..-.
T Consensus 80 ~li~~nW~lfiWAvn~g~~leaSLGY~InPL~~VllG~lflkErls~~Q~iAV~lA~~GV~~~~ 143 (293)
T COG2962 80 LLIGLNWWLFIWAVNNGHVLEASLGYFINPLVNVLLGRLFLKERLSRLQWIAVGLAAAGVLIQT 143 (293)
T ss_pred HHHHHHHHHhheecCCCchhHHHhHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHH
Confidence 4433333445588888899999999999999999999999999999999999999999998744
No 60
>PRK15051 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE; Provisional
Probab=97.97 E-value=0.0004 Score=53.05 Aligned_cols=57 Identities=9% Similarity=0.064 Sum_probs=50.2
Q ss_pred HHHHHHHhcchhHHHHHHhhhhhHHHhhhhHhhcCCccchhhHHHHHHHHHhHhhhh
Q 018749 250 LAVFLLVGKTSALTMNVAGVVKDWLLIAFSWSVIKDTVTPINLFGYGLAFLGVAYYN 306 (351)
Q Consensus 250 ~~~~~~~~~~~~~~~s~~~~l~~v~~~~~~~~~~~e~~s~~~~~G~~li~~g~~l~~ 306 (351)
.+....+++.+...+-....+.++.+.+.|+++|||++|+.+++|..+++.|+.+..
T Consensus 52 ~~~~~al~~iplg~Ay~~~~l~~v~~~~~~~l~f~E~ls~~~~~Gi~lii~Gv~~i~ 108 (111)
T PRK15051 52 VLWLLVLQNVPVGIAYPMLSLNFVWVTLAAVKLWHEPVSPRHWCGVAFIIGGIVILG 108 (111)
T ss_pred HHHHHHHhhCChHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHh
Confidence 344567888888888888889999999999999999999999999999999998754
No 61
>COG4975 GlcU Putative glucose uptake permease [Carbohydrate transport and metabolism]
Probab=97.89 E-value=5.8e-06 Score=70.11 Aligned_cols=239 Identities=15% Similarity=0.084 Sum_probs=155.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhcccCCCCCChhhHhHHHHHHHHHHHHHHhhhhhhcccccHHHHHHHH-HHHHHHHHH
Q 018749 50 PISLTMIHMSFCATLAFLLIKVFKFVEPVTMSRDLYFSSVVPIGALYSLSLWLSNSAYIYLSVSFIQMLK-ALMPVAVYS 128 (351)
Q Consensus 50 p~~~~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~al~~~~~s~~~vi~-~~~pi~~~l 128 (351)
|..-+.-..+-+.+....++. . .++..+.+. +-.-++.|++.+.....++.|++++.+|.+.-+. .+.-+-+-+
T Consensus 28 p~qQ~lGtT~GALifaiiv~~-~---~~p~~T~~~-~iv~~isG~~Ws~GQ~~Qfka~~~iGVSkamPiStG~QLVg~sL 102 (288)
T COG4975 28 PYQQTLGTTLGALIFAIIVFL-F---VSPELTLTI-FIVGFISGAFWSFGQANQFKAIQLIGVSKAMPISTGMQLVGTSL 102 (288)
T ss_pred hhHhhhhccHHHHHHHHHHhe-e---ecCccchhh-HHHHHHhhhHhhhhhhhhhhheeeeeeeccccccchhhHhhcee
Confidence 555444433333333333332 2 234444444 3456777888899999999999999998876555 456677888
Q ss_pred HHHHhccccccchh----hHHHHHHHhhhheeeecCcc--------cchhHHHHHHHHHHHHHHHHHHHHHHhhcCCCCC
Q 018749 129 IGVTFKKESFKSDT----MCNMVSISVGVAIAAYGEAK--------FDSWGVVLQLGAVAFEATRLVMIQILLTSKGITL 196 (351)
Q Consensus 129 l~~~~~~e~~~~~~----~~~~~l~~~Gv~l~~~~~~~--------~~~~G~~~~l~s~~~~a~~~v~~~~~~~~~~~~~ 196 (351)
++++.++|-.+..+ ..++++.++|+.+.+..|.+ .--.|+...+.|.+.|-.|-+..+.. +.
T Consensus 103 ~gV~~f~EW~t~~~~IlG~iAliliviG~~lTs~~~~~nk~~~~~~n~kkgi~~L~iSt~GYv~yvvl~~~f------~v 176 (288)
T COG4975 103 FGVFVFHEWTTPTQIILGFIALILIVIGIYLTSKQDRNNKEEENPSNLKKGIVILLISTLGYVGYVVLFQLF------DV 176 (288)
T ss_pred eeEEEEeccCcchhHHHHHHHHHHHHHhheEeeeeccccccccChHhhhhheeeeeeeccceeeeEeeeccc------cc
Confidence 99999999888766 46788899999998876531 11468888899999999999887765 23
Q ss_pred ChHHHHHHHhHHHHHHHHHHHHHhhchhhhhcCCCcchhHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHhhhhhHHHh
Q 018749 197 NPITSLYYVAPCCLVFLLVPWIFVELPILRETSSFHFDFVIFGTNSLCAFALNLAVFLLVGKTSALTMNVAGVVKDWLLI 276 (351)
Q Consensus 197 ~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~l~~v~~~ 276 (351)
+.+....-+..-..+..+......+. . ......+.-+..++.-...|...+...++.+-.+.=.++.+..+.++
T Consensus 177 ~g~saiLPqAiGMv~~ali~~~~~~~-~-----~~~K~t~~nii~G~~Wa~GNl~ml~a~~~~GvAt~FSlSQlgViisT 250 (288)
T COG4975 177 DGLSAILPQAIGMVIGALILGFFKME-K-----RFNKYTWLNIIPGLIWAIGNLFMLLAAQKVGVATSFSLSQLGVIIST 250 (288)
T ss_pred cchhhhhHHHHHHHHHHHHHhhcccc-c-----chHHHHHHHHhhHHHHHhhHHHHHHhhhhhceeeeeeHhhheeeeee
Confidence 44444433322212222222221111 1 11111234445555555667777777777766666566778889999
Q ss_pred hhhHhhcCCccchhh----HHHHHHHHHhHhhh
Q 018749 277 AFSWSVIKDTVTPIN----LFGYGLAFLGVAYY 305 (351)
Q Consensus 277 ~~~~~~~~e~~s~~~----~~G~~li~~g~~l~ 305 (351)
+-|+++++|+=|..+ ++|++++++|..+.
T Consensus 251 iGGIl~L~ekKtkkEm~~v~iGiilivvgai~l 283 (288)
T COG4975 251 IGGILFLGEKKTKKEMVYVIIGIILIVVGAILL 283 (288)
T ss_pred cceEEEEeccCchhhhhhhhhhHHHHHHHhhhh
Confidence 999999999988775 56777777777653
No 62
>PRK02971 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF; Provisional
Probab=97.87 E-value=6.4e-05 Score=58.94 Aligned_cols=72 Identities=25% Similarity=0.200 Sum_probs=63.5
Q ss_pred HHHHHHHHHHHHhhhhhhcccccHHHHHHHHHHHHHHHHHHHHH--hccccccchhhHHHHHHHhhhheeeecC
Q 018749 89 VVPIGALYSLSLWLSNSAYIYLSVSFIQMLKALMPVAVYSIGVT--FKKESFKSDTMCNMVSISVGVAIAAYGE 160 (351)
Q Consensus 89 ~~~~~l~~~~~~~~~~~al~~~~~s~~~vi~~~~pi~~~ll~~~--~~~e~~~~~~~~~~~l~~~Gv~l~~~~~ 160 (351)
+..+.+++.+...+++.+++..|++.+.-+.+..+..+.+.++. +++|+++..+++|++++++|+.++..++
T Consensus 51 i~lgl~~~~la~~~w~~aL~~~~ls~Ayp~~sl~~~~v~~~~~~~~~~~E~ls~~~~iGi~lIi~GV~lv~~~~ 124 (129)
T PRK02971 51 VLLGLAGYALSMLCWLKALRYLPLSRAYPLLSLSYALVYLAAMLLPWFNETFSLKKTLGVACIMLGVWLINLPT 124 (129)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHhccCC
Confidence 44556678999999999999999999999999998888888875 8999999999999999999999876543
No 63
>TIGR00776 RhaT RhaT L-rhamnose-proton symporter family protein. These proteins are members of the L-Rhamnose Symporter (RhaT) Family (TC 2.A.7). This family includes two characterized members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.
Probab=97.86 E-value=0.00035 Score=63.17 Aligned_cols=128 Identities=10% Similarity=-0.003 Sum_probs=89.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhcccccccccHHHHHHHHHH---HHHHHHHHHHHHhcccCCCCCChhhHhHHHHHHH
Q 018749 17 LSYTYVAIWIFLSFTVIVYNKYILDKKMYNWPFPISLTMIHMS---FCATLAFLLIKVFKFVEPVTMSRDLYFSSVVPIG 93 (351)
Q Consensus 17 ~~~~~~~~~~~~~~~~~~~~K~~l~~~~~~~~~p~~~~~~r~~---~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 93 (351)
+...+.++..+.........|... .+ |...++.++. ++.++.....+ +.++. +.+. .+..+..+
T Consensus 152 ~Gi~~~l~sg~~y~~~~~~~~~~~------~~-~~~~~~~~~~g~~~~~~~~~~~~~----~~~~~-~~~~-~~~~~~~G 218 (290)
T TIGR00776 152 KGILLLLMSTIGYLVYVVVAKAFG------VD-GLSVLLPQAIGMVIGGIIFNLGHI----LAKPL-KKYA-ILLNILPG 218 (290)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHcC------CC-cceehhHHHHHHHHHHHHHHHHHh----cccch-HHHH-HHHHHHHH
Confidence 345555555566666666777542 44 7777666665 23322222211 11111 2222 33344477
Q ss_pred HHHHHHHhhhhhhcc-cccHHHHHHHHHHHHHHHHHHHHHhccccccchhh----HHHHHHHhhhheee
Q 018749 94 ALYSLSLWLSNSAYI-YLSVSFIQMLKALMPVAVYSIGVTFKKESFKSDTM----CNMVSISVGVAIAA 157 (351)
Q Consensus 94 l~~~~~~~~~~~al~-~~~~s~~~vi~~~~pi~~~ll~~~~~~e~~~~~~~----~~~~l~~~Gv~l~~ 157 (351)
+.....+.+++.+.+ +.+++.+.++.+..|+...+++++++||+.+++++ +|.++.++|+.+..
T Consensus 219 i~~~ia~~~y~~~~~~~~~~~~~~~ls~~~pvia~~~~v~~l~E~~~~~~~~~~~iG~~lIi~~~~l~~ 287 (290)
T TIGR00776 219 LMWGIGNFFYLFSAQPKVGVATSFSLSQLGVIISTLGGILILGEKKTKREMIAISVGIILIIIAANILG 287 (290)
T ss_pred HHHHHHHHHHHHHcccccchhhHHHHHHHHHHHHHHHHHHHhccCCCcceeehhHHHHHHHHHHHHHHh
Confidence 778888999999999 99999999999999999999999999999999999 99999999987753
No 64
>PF08449 UAA: UAA transporter family; InterPro: IPR013657 This family includes transporters with a specificity for UDP-N-acetylglucosamine []. ; GO: 0055085 transmembrane transport
Probab=97.82 E-value=0.00047 Score=62.79 Aligned_cols=129 Identities=12% Similarity=0.065 Sum_probs=90.4
Q ss_pred HHHHHHHHHHHhhcCCCCCChHHHHHHHhHHHHHHHHHHHHHhhchhhhhcCCCcchhHHHHHHHHHHHHHHHHHHHHHh
Q 018749 178 EATRLVMIQILLTSKGITLNPITSLYYVAPCCLVFLLVPWIFVELPILRETSSFHFDFVIFGTNSLCAFALNLAVFLLVG 257 (351)
Q Consensus 178 ~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (351)
+..+.+.+|++++++.....+..+.+.+.....+...+.......+. .....+.-....+++......+.+.+++
T Consensus 12 ~~~~g~~qE~i~~~~~~~~~~~~lt~~q~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~al~ 86 (303)
T PF08449_consen 12 CCSYGILQEKIMTTPYGSPFPLFLTFVQFAFNALFSFILLSLFKFPK-----SRKIPLKKYAILSFLFFLASVLSNAALK 86 (303)
T ss_pred HHHHHHHHHHHHcCCCCCcccHHHHHHHHHHHHHHHHHHHHhccccC-----CCcChHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34466889999886543324666666666665554443332222011 1111122333445566666677788899
Q ss_pred cchhHHHHHHhhhhhHHHhhhhHhhcCCccchhhHHHHHHHHHhHhhhhhhhhh
Q 018749 258 KTSALTMNVAGVVKDWLLIAFSWSVIKDTVTPINLFGYGLAFLGVAYYNHSKLQ 311 (351)
Q Consensus 258 ~~~~~~~s~~~~l~~v~~~~~~~~~~~e~~s~~~~~G~~li~~g~~l~~~~~~~ 311 (351)
+++..+..+....+++...+++.++++++.+..++++..++.+|+.+....+.+
T Consensus 87 ~i~~p~~~~~ks~~~i~vmi~~~l~~~k~y~~~~~~~v~li~~Gv~~~~~~~~~ 140 (303)
T PF08449_consen 87 YISYPTQIVFKSSKPIPVMILGVLILGKRYSRRQYLSVLLITIGVAIFTLSDSS 140 (303)
T ss_pred hCChHHHHHHhhhHHHHHHHHHHHhcCccccHHHHHHHHHHHhhHheeeecccc
Confidence 999999999999999999999999999999999999999999999998766543
No 65
>PF06027 DUF914: Eukaryotic protein of unknown function (DUF914); InterPro: IPR009262 This family consists of several hypothetical proteins of unknown function. Some of the sequences in this family are annotated as putative membrane proteins.
Probab=97.75 E-value=0.001 Score=60.75 Aligned_cols=142 Identities=12% Similarity=0.060 Sum_probs=94.1
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCChHHHHHHHhHHHHHHHHHHHHHhhchhhhhcCCCcchhHHHHHHHHH
Q 018749 165 SWGVVLQLGAVAFEATRLVMIQILLTSKGITLNPITSLYYVAPCCLVFLLVPWIFVELPILRETSSFHFDFVIFGTNSLC 244 (351)
Q Consensus 165 ~~G~~~~l~s~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (351)
+.+.+++-.-++|-+..++.+..+.++ +.+.+..+.......... +..+......+.. .........|+.-++-+++
T Consensus 12 ~~~~~lgQ~lsl~~~~t~~~s~~l~~~-~~~~P~~Qs~~~Y~~l~~-vy~~~~~~r~~~~-~~~~~~~~~~w~y~lla~~ 88 (334)
T PF06027_consen 12 WIVLLLGQVLSLCITGTGTFSSLLANK-GVNIPTFQSFFNYVLLAL-VYTPILLYRRGFK-KWLKVLKRPWWKYFLLALL 88 (334)
T ss_pred HHHHHHHHHHHHHHHhHHHHHHHHHhc-CccCcHHHHHHHHHHHHH-HHhhhhhhccccc-cchhhcchhHHHHHHHHHH
Confidence 456666667777777777777777665 445455554433332222 2222222111110 0001111223333333566
Q ss_pred HHHHHHHHHHHHhcchhHHHHHHhhhhhHHHhhhhHhhcCCccchhhHHHHHHHHHhHhhhhhhh
Q 018749 245 AFALNLAVFLLVGKTSALTMNVAGVVKDWLLIAFSWSVIKDTVTPINLFGYGLAFLGVAYYNHSK 309 (351)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~~s~~~~l~~v~~~~~~~~~~~e~~s~~~~~G~~li~~g~~l~~~~~ 309 (351)
=...|+..+.+.++++.+...++.....+++.++|++++++++++.|++|+.+++.|+.+.....
T Consensus 89 Dv~aN~~~v~a~~yTsvtS~~lL~~~~i~~~~~LS~~fL~~ry~~~~~~gv~i~i~Gv~lv~~sD 153 (334)
T PF06027_consen 89 DVEANYLVVLAYQYTSVTSVQLLDCTSIPFVMILSFIFLKRRYSWFHILGVLICIAGVVLVVVSD 153 (334)
T ss_pred HHHHHHHHHHHhhcccHhHHHhhhhhhhHHHHHHHHHHHHhhhhHHHHHHHHHHHhhhhheeeec
Confidence 77778888999999999999999999999999999999999999999999999999998765443
No 66
>PRK10452 multidrug efflux system protein MdtJ; Provisional
Probab=97.72 E-value=0.00039 Score=53.56 Aligned_cols=71 Identities=14% Similarity=0.159 Sum_probs=63.2
Q ss_pred HHHHHHHHHHHHhhhhhhcccccHHHHHHHH-HHHHHHHHHHHHHhccccccchhhHHHHHHHhhhheeeec
Q 018749 89 VVPIGALYSLSLWLSNSAYIYLSVSFIQMLK-ALMPVAVYSIGVTFKKESFKSDTMCNMVSISVGVAIAAYG 159 (351)
Q Consensus 89 ~~~~~l~~~~~~~~~~~al~~~~~s~~~vi~-~~~pi~~~ll~~~~~~e~~~~~~~~~~~l~~~Gv~l~~~~ 159 (351)
.....++++.+..+...+++++|.+.+..+- ....+.+.++++++++|+++..+++++.++++|++.+...
T Consensus 33 ~~~~i~~~~~sf~~ls~al~~lplsiAYavw~GiG~v~~~~ig~~~f~E~~s~~~~~gi~lIi~GVi~l~l~ 104 (120)
T PRK10452 33 FILMLVMISLSYIFLSFAVKKIALGVAYALWEGIGILFITLFSVLLFDESLSLMKIAGLTTLVAGIVLIKSG 104 (120)
T ss_pred HHHHHHHHHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHhhcC
Confidence 4456777888999999999999999999885 6889999999999999999999999999999999886553
No 67
>COG0697 RhaT Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only]
Probab=97.72 E-value=0.0018 Score=58.12 Aligned_cols=133 Identities=17% Similarity=0.221 Sum_probs=86.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhcccccccccHHHHHH-HHHHHHHHHHHHHHHHhcccCCCCCChhhHhHHHHHHHHH
Q 018749 17 LSYTYVAIWIFLSFTVIVYNKYILDKKMYNWPFPISLTM-IHMSFCATLAFLLIKVFKFVEPVTMSRDLYFSSVVPIGAL 95 (351)
Q Consensus 17 ~~~~~~~~~~~~~~~~~~~~K~~l~~~~~~~~~p~~~~~-~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 95 (351)
....+++.-.+........+|...+ .+ +....+ +++............ ... ....+.+.+ ......++.
T Consensus 154 ~g~~~~l~a~~~~a~~~~~~~~~~~-----~~-~~~~~~~~~~~~~~~~~~~~~~--~~~-~~~~~~~~~-~~~~~~g~~ 223 (292)
T COG0697 154 LGLLLALAAALLWALYTALVKRLSR-----LG-PVTLALLLQLLLALLLLLLFFL--SGF-GAPILSRAW-LLLLYLGVF 223 (292)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcC-----CC-hHHHHHHHHHHHHHHHHHHHHh--ccc-cccCCHHHH-HHHHHHHHH
Confidence 3333444444444455556665541 22 444444 555422222222221 111 123344443 344445555
Q ss_pred H-HHHHhhhhhhcccccHHHHHHHHHHHHHHHHHHHHHhccccccchhhHHHHHHHhhhheeeec
Q 018749 96 Y-SLSLWLSNSAYIYLSVSFIQMLKALMPVAVYSIGVTFKKESFKSDTMCNMVSISVGVAIAAYG 159 (351)
Q Consensus 96 ~-~~~~~~~~~al~~~~~s~~~vi~~~~pi~~~ll~~~~~~e~~~~~~~~~~~l~~~Gv~l~~~~ 159 (351)
. +....+++.+++..+++..+.+..+.|++..++++++++|+++..++.|+++.++|+.+....
T Consensus 224 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~l~~~e~~~~~~~~G~~li~~g~~l~~~~ 288 (292)
T COG0697 224 STGLAYLLWYYALRLLGASLVALLSLLEPVFAALLGVLLLGEPLSPAQLLGAALVVLGVLLASLR 288 (292)
T ss_pred HHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHhcc
Confidence 4 468899999999999999999999999999999999999999999999999999998876543
No 68
>PRK09541 emrE multidrug efflux protein; Reviewed
Probab=97.62 E-value=0.00065 Score=51.61 Aligned_cols=70 Identities=17% Similarity=0.226 Sum_probs=61.1
Q ss_pred HHHHHHHHHHHhhhhhhcccccHHHHHHHH-HHHHHHHHHHHHHhccccccchhhHHHHHHHhhhheeeec
Q 018749 90 VPIGALYSLSLWLSNSAYIYLSVSFIQMLK-ALMPVAVYSIGVTFKKESFKSDTMCNMVSISVGVAIAAYG 159 (351)
Q Consensus 90 ~~~~l~~~~~~~~~~~al~~~~~s~~~vi~-~~~pi~~~ll~~~~~~e~~~~~~~~~~~l~~~Gv~l~~~~ 159 (351)
....+++++...+...+++.+|.+.+..+- ....+.+.+.++++++|++++.+++++.++++|+++....
T Consensus 34 i~~~~~~~~sf~~l~~al~~ipl~iAYavw~GlG~v~~~l~g~~~f~e~~~~~~~~gi~lIi~GVi~l~l~ 104 (110)
T PRK09541 34 VGTIICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPAIIGMMLICAGVLVINLL 104 (110)
T ss_pred HHHHHHHHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhcC
Confidence 345667788888889999999999999885 5788899999999999999999999999999999886543
No 69
>PF04657 DUF606: Protein of unknown function, DUF606; InterPro: IPR006750 This family contains uncharacterised bacterial proteins.
Probab=97.53 E-value=0.0059 Score=48.56 Aligned_cols=131 Identities=17% Similarity=0.170 Sum_probs=91.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhcCCCCCChHHHHHHHhHHHHHHHHHHHHHhhchhhhhcCCCcchhHHHHHHHHHHHH
Q 018749 168 VVLQLGAVAFEATRLVMIQILLTSKGITLNPITSLYYVAPCCLVFLLVPWIFVELPILRETSSFHFDFVIFGTNSLCAFA 247 (351)
Q Consensus 168 ~~~~l~s~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (351)
.++++.+.++-++...+..++-++- -+++.........+.+...+.....+.+..... ....| +...+++++..
T Consensus 3 ~lla~~aG~~i~~q~~~N~~L~~~~---gs~~~as~i~~~~G~i~~~i~~~~~~~~~~~~~--~~~p~-w~~lGG~lG~~ 76 (138)
T PF04657_consen 3 ILLALLAGALIALQAAFNGQLGKAL---GSPLVASFISFGVGFILLLIILLITGRPSLASL--SSVPW-WAYLGGLLGVF 76 (138)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHh---CccHHHHHHHHHHHHHHHHHHHHHhcccccchh--ccCCh-HHhccHHHHHH
Confidence 5677888888888888888875531 158888888888888877766665554322211 12223 34447778777
Q ss_pred HHHHHHHHHhcchhHHHHHHhhhhhHH-HhhhhHh-hc---CCccchhhHHHHHHHHHhHhh
Q 018749 248 LNLAVFLLVGKTSALTMNVAGVVKDWL-LIAFSWS-VI---KDTVTPINLFGYGLAFLGVAY 304 (351)
Q Consensus 248 ~~~~~~~~~~~~~~~~~s~~~~l~~v~-~~~~~~~-~~---~e~~s~~~~~G~~li~~g~~l 304 (351)
+-.+....+++.++...........+. +.+++.+ .| ++++++.+++|..++++|+.+
T Consensus 77 ~V~~~~~~vp~lG~~~~~~l~~~GQl~~sl~iD~fG~fg~~~~~~~~~r~lG~~l~i~Gv~L 138 (138)
T PF04657_consen 77 FVLSNIILVPRLGAALTTILIVAGQLIASLLIDHFGLFGAPKRPFSLRRILGLALMIAGVIL 138 (138)
T ss_pred HHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHccccCCCCCCCCHHHHHHHHHHHHHHhC
Confidence 777777888999998888777665554 4556664 23 367999999999999999863
No 70
>PRK11431 multidrug efflux system protein; Provisional
Probab=97.50 E-value=0.0014 Score=49.34 Aligned_cols=69 Identities=16% Similarity=0.071 Sum_probs=60.1
Q ss_pred HHHHHHHHHHHHhhhhhhcccccHHHHHHHHH-HHHHHHHHHHHHhccccccchhhHHHHHHHhhhheee
Q 018749 89 VVPIGALYSLSLWLSNSAYIYLSVSFIQMLKA-LMPVAVYSIGVTFKKESFKSDTMCNMVSISVGVAIAA 157 (351)
Q Consensus 89 ~~~~~l~~~~~~~~~~~al~~~~~s~~~vi~~-~~pi~~~ll~~~~~~e~~~~~~~~~~~l~~~Gv~l~~ 157 (351)
.+...++++.+..+...+++.+|.+.+..+-. ...+.+.+.+++++||+++..+++++.+.++|++...
T Consensus 32 ~~~~i~~~~~sf~~Ls~al~~ip~gvaYAvW~GiG~v~~~lig~~~f~e~~~~~~~~gi~lIi~GVv~l~ 101 (105)
T PRK11431 32 SIITVTAMIVSMALLAWAMKSLPVGTAYAVWTGIGAVGAAITGIVLLGESASPARLLSLALIVAGIIGLK 101 (105)
T ss_pred HHHHHHHHHHHHHHHHHHHhhCCcHhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHhhh
Confidence 34456678888888999999999998887764 7788999999999999999999999999999998754
No 71
>COG2076 EmrE Membrane transporters of cations and cationic drugs [Inorganic ion transport and metabolism]
Probab=97.49 E-value=0.00093 Score=49.77 Aligned_cols=70 Identities=19% Similarity=0.133 Sum_probs=59.8
Q ss_pred HHHHHHHHHHHHhhhhhhcccccHHHHHHHH-HHHHHHHHHHHHHhccccccchhhHHHHHHHhhhheeee
Q 018749 89 VVPIGALYSLSLWLSNSAYIYLSVSFIQMLK-ALMPVAVYSIGVTFKKESFKSDTMCNMVSISVGVAIAAY 158 (351)
Q Consensus 89 ~~~~~l~~~~~~~~~~~al~~~~~s~~~vi~-~~~pi~~~ll~~~~~~e~~~~~~~~~~~l~~~Gv~l~~~ 158 (351)
.....+++..+..+...+++++|++.+..+- ..-.+.+.+.++++++|+.+..+++++.+.++|++....
T Consensus 33 ~il~~v~~~~sf~~Ls~alk~ipvgvAYAiW~GiG~v~~~l~g~~~f~E~l~~~~~~gl~LiiaGvi~Lk~ 103 (106)
T COG2076 33 SILTIVGYGLSFYLLSLALKTIPLGVAYAIWTGIGIVGTALVGVLLFGESLSLIKLLGLALILAGVIGLKL 103 (106)
T ss_pred HHHHHHHHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHhcCCcCCHHHHHHHHHHHHHHHHhhh
Confidence 4445667788888889999999999887665 567889999999999999999999999999999987543
No 72
>PRK10650 multidrug efflux system protein MdtI; Provisional
Probab=97.49 E-value=0.002 Score=48.69 Aligned_cols=68 Identities=12% Similarity=0.015 Sum_probs=58.7
Q ss_pred HHHHHHHHHHHHhhhhhhcccccHHHHHHHH-HHHHHHHHHHHHHhccccccchhhHHHHHHHhhhhee
Q 018749 89 VVPIGALYSLSLWLSNSAYIYLSVSFIQMLK-ALMPVAVYSIGVTFKKESFKSDTMCNMVSISVGVAIA 156 (351)
Q Consensus 89 ~~~~~l~~~~~~~~~~~al~~~~~s~~~vi~-~~~pi~~~ll~~~~~~e~~~~~~~~~~~l~~~Gv~l~ 156 (351)
.....+++..+..+...+++.+|++.+..+- ....+.+.+.+++++||+++..|++++.++++|+...
T Consensus 38 ~~~~~~~~~~sf~~Ls~al~~lpvgvAYAvW~GiG~v~~~~ig~~~f~e~~~~~~~~gi~lIi~GVi~l 106 (109)
T PRK10650 38 GILSLAAVLAAFSALSQAVKGIDLSVAYALWGGFGIAATLAAGWILFGQRLNRKGWIGLVLLLAGMVMI 106 (109)
T ss_pred HHHHHHHHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHh
Confidence 4445667788888889999999999987776 4678899999999999999999999999999999764
No 73
>PF06800 Sugar_transport: Sugar transport protein; InterPro: IPR010651 This is a family of bacterial sugar transporters approximately 300 residues long. Members include glucose uptake proteins [], ribose transport proteins, and several putative and hypothetical membrane proteins probably involved in sugar transport across bacterial membranes.; GO: 0015144 carbohydrate transmembrane transporter activity, 0034219 carbohydrate transmembrane transport, 0016021 integral to membrane
Probab=97.44 E-value=0.0034 Score=55.30 Aligned_cols=102 Identities=13% Similarity=0.083 Sum_probs=72.0
Q ss_pred cccHHHHHHHHHHHHHHHHHHHHHHhcccCCCCCChhhHhHHHHHHHHHHHHHHhhhhhhcccccHHHHHHHHHHHHHHH
Q 018749 47 WPFPISLTMIHMSFCATLAFLLIKVFKFVEPVTMSRDLYFSSVVPIGALYSLSLWLSNSAYIYLSVSFIQMLKALMPVAV 126 (351)
Q Consensus 47 ~~~p~~~~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~al~~~~~s~~~vi~~~~pi~~ 126 (351)
.+ |+...+=|. ++.++...+..... ++....++ .+.-...|+.++..+.++..|.+...++.+..+..+.++..
T Consensus 162 ~~-~~~~~lPqa-iGm~i~a~i~~~~~--~~~~~~k~--~~~nil~G~~w~ignl~~~is~~~~G~a~af~lSQ~~vvIS 235 (269)
T PF06800_consen 162 VS-GWSAFLPQA-IGMLIGAFIFNLFS--KKPFFEKK--SWKNILTGLIWGIGNLFYLISAQKNGVATAFTLSQLGVVIS 235 (269)
T ss_pred CC-hhHhHHHHH-HHHHHHHHHHhhcc--cccccccc--hHHhhHHHHHHHHHHHHHHHhHHhccchhhhhHHhHHHHHH
Confidence 44 666666554 44444333333222 12222222 24467789999999999999999999999999999999999
Q ss_pred HHHHHHhccccccchhhH----HHHHHHhhhh
Q 018749 127 YSIGVTFKKESFKSDTMC----NMVSISVGVA 154 (351)
Q Consensus 127 ~ll~~~~~~e~~~~~~~~----~~~l~~~Gv~ 154 (351)
.+.+.+++||+-+++++. ++++.++|.+
T Consensus 236 tlgGI~il~E~Kt~ke~~~~~~G~~Liv~G~i 267 (269)
T PF06800_consen 236 TLGGIFILKEKKTKKEMIYTLIGLILIVIGAI 267 (269)
T ss_pred HhhhheEEEecCchhhHHHHHHHHHHHHHhhh
Confidence 999999999998888754 4555555544
No 74
>KOG2922 consensus Uncharacterized conserved protein [Function unknown]
Probab=97.37 E-value=0.00065 Score=60.31 Aligned_cols=69 Identities=17% Similarity=0.092 Sum_probs=62.3
Q ss_pred HHHHHHHHHHhhhhhhcccccHHHHHHHHHHHHHHHHHHHHHhccccccchhhHHHHHHHhhhheeeec
Q 018749 91 PIGALYSLSLWLSNSAYIYLSVSFIQMLKALMPVAVYSIGVTFKKESFKSDTMCNMVSISVGVAIAAYG 159 (351)
Q Consensus 91 ~~~l~~~~~~~~~~~al~~~~~s~~~vi~~~~pi~~~ll~~~~~~e~~~~~~~~~~~l~~~Gv~l~~~~ 159 (351)
.+-+.+..+-...+.|+.+.|.+..+-+.+++.+..++++..++|||+++.-.+|+.++++|..++...
T Consensus 69 ~G~ltm~vGei~NFaAYaFAPasLVtPLGAlsvi~saila~~~L~Ekl~~~g~lGc~l~v~Gst~iV~h 137 (335)
T KOG2922|consen 69 AGMLTMIVGEIANFAAYAFAPASLVTPLGALSVIISAILASFFLKEKLNLLGILGCVLCVVGSTTIVIH 137 (335)
T ss_pred HHHHHHHHHhHhhHHHHhhchHhhhccchhHHHHHHHHHHHHHHHHHHHHhhhhheeEEecccEEEEEe
Confidence 345567888888999999999999999999999999999999999999999999999999998776653
No 75
>PF04142 Nuc_sug_transp: Nucleotide-sugar transporter; InterPro: IPR007271 This family of membrane proteins transport nucleotide sugars from the cytoplasm into golgi vesicles. P78382 from SWISSPROT transports CMP-sialic acid, P78381 from SWISSPROT transports UDP-galactose and Q9Y2D2 from SWISSPROT transports UDP-GlcNAc. This family has some but not complete overlap with the UDP-galactose transporter family IPR004689 from INTERPRO.; GO: 0005351 sugar:hydrogen symporter activity, 0008643 carbohydrate transport, 0000139 Golgi membrane, 0016021 integral to membrane
Probab=97.21 E-value=0.00092 Score=58.68 Aligned_cols=76 Identities=17% Similarity=0.090 Sum_probs=67.6
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHhhhhhHHHhhhhHhhcCCccchhhHHHHHHHHHhHhhhhhhhh
Q 018749 235 FVIFGTNSLCAFALNLAVFLLVGKTSALTMNVAGVVKDWLLIAFSWSVIKDTVTPINLFGYGLAFLGVAYYNHSKL 310 (351)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~l~~v~~~~~~~~~~~e~~s~~~~~G~~li~~g~~l~~~~~~ 310 (351)
.....+..++-...|...+..+++.+|.+..+....+.+++.++++++++.+++..||++..+...|+.+......
T Consensus 17 ~~~~~vPA~lY~~qn~L~~~al~~ld~~t~qvl~q~kIl~TAl~s~~~L~r~ls~~qW~aL~lL~~Gv~lv~~~~~ 92 (244)
T PF04142_consen 17 TLKLAVPALLYAIQNNLQFVALSYLDPSTFQVLSQSKILFTALFSVLLLKRRLSRRQWLALFLLVAGVVLVQLSSS 92 (244)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHhhHHHHHHHHHHHHHHcccchhhHHHHHHHHHHHheeecCCc
Confidence 3456667777888888899999999999999999999999999999999999999999999999999998665443
No 76
>PF07857 DUF1632: CEO family (DUF1632); InterPro: IPR012435 These sequences are found in hypothetical eukaryotic proteins of unknown function. The region concerned is approximately 280 residues long.
Probab=97.15 E-value=0.0011 Score=58.03 Aligned_cols=132 Identities=15% Similarity=0.078 Sum_probs=79.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhcCCCCCChHHHHHHHhHHHHHHHHHHHHHhhchhhhhcCCCcchhHHHHHHHHHHH
Q 018749 167 GVVLQLGAVAFEATRLVMIQILLTSKGITLNPITSLYYVAPCCLVFLLVPWIFVELPILRETSSFHFDFVIFGTNSLCAF 246 (351)
Q Consensus 167 G~~~~l~s~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (351)
|++.+++|+++++-..+=.||.- ..|++-..+++.....+.-++..+..+.+.+. .+..+++.+-.
T Consensus 1 G~~a~~va~~~fGs~~vPvK~~~-----~gDg~~fQw~~~~~i~~~g~~v~~~~~~p~f~---------p~amlgG~lW~ 66 (254)
T PF07857_consen 1 GYIACIVAVLFFGSNFVPVKKFD-----TGDGFFFQWVMCSGIFLVGLVVNLILGFPPFY---------PWAMLGGALWA 66 (254)
T ss_pred CchhHHHHHHHhcccceeeEecc-----CCCcHHHHHHHHHHHHHHHHHHHHhcCCCcce---------eHHHhhhhhhh
Confidence 67788899999998777777651 33676666665544444433333333332221 12333444444
Q ss_pred HHHHHHHHHHhcch-hHHHHHHhhhhhHHHhhhhHh-hcCCc-----cchhhHHHHHHHHHhHhhhhhhhhhh
Q 018749 247 ALNLAVFLLVGKTS-ALTMNVAGVVKDWLLIAFSWS-VIKDT-----VTPINLFGYGLAFLGVAYYNHSKLQA 312 (351)
Q Consensus 247 ~~~~~~~~~~~~~~-~~~~s~~~~l~~v~~~~~~~~-~~~e~-----~s~~~~~G~~li~~g~~l~~~~~~~~ 312 (351)
..|.+..-.++.++ +.-..+.+..+-+.+...|-+ +||++ -.++.++|++++++|..+|...|...
T Consensus 67 ~gN~~~vpii~~iGLglg~liW~s~n~l~Gw~~grfGlFg~~~~~~~~~~Ln~~G~~l~~~~~~~f~fik~~~ 139 (254)
T PF07857_consen 67 TGNILVVPIIKTIGLGLGMLIWGSVNCLTGWASGRFGLFGLDPQVPSSPWLNYIGVALVLVSGIIFSFIKSEE 139 (254)
T ss_pred cCceeehhHhhhhhhHHHHHHHHHHHHHHHHHHhhceeccccccccchhHHHHHHHHHHHHHHHheeeecCCC
Confidence 44544455555554 333445555566666666654 56543 36779999999999999998766544
No 77
>PRK10650 multidrug efflux system protein MdtI; Provisional
Probab=97.14 E-value=0.024 Score=42.89 Aligned_cols=52 Identities=13% Similarity=0.173 Sum_probs=43.1
Q ss_pred HHhcch-hHHHHHHhhhhhHHHhhhhHhhcCCccchhhHHHHHHHHHhHhhhh
Q 018749 255 LVGKTS-ALTMNVAGVVKDWLLIAFSWSVIKDTVTPINLFGYGLAFLGVAYYN 306 (351)
Q Consensus 255 ~~~~~~-~~~~s~~~~l~~v~~~~~~~~~~~e~~s~~~~~G~~li~~g~~l~~ 306 (351)
++|+.+ .+.+++..-+..+.+.+.|+++|+|++|+.+++|+.+++.|+...+
T Consensus 55 al~~lpvgvAYAvW~GiG~v~~~~ig~~~f~e~~~~~~~~gi~lIi~GVi~lk 107 (109)
T PRK10650 55 AVKGIDLSVAYALWGGFGIAATLAAGWILFGQRLNRKGWIGLVLLLAGMVMIK 107 (109)
T ss_pred HHhhCchHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHhc
Confidence 445554 3456777778888999999999999999999999999999998743
No 78
>KOG4510 consensus Permease of the drug/metabolite transporter (DMT) superfamily [General function prediction only]
Probab=97.05 E-value=0.00013 Score=62.76 Aligned_cols=135 Identities=15% Similarity=0.218 Sum_probs=87.8
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCChHHHHHHHhHHHHHHHHHHHHHhhchhhhhcCCCcchhHHHHHHHHH
Q 018749 165 SWGVVLQLGAVAFEATRLVMIQILLTSKGITLNPITSLYYVAPCCLVFLLVPWIFVELPILRETSSFHFDFVIFGTNSLC 244 (351)
Q Consensus 165 ~~G~~~~l~s~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (351)
-.|..+..++ .++....+..++.... +|.+....-.+.-.+...+..+....+.+.....- .++++=++.
T Consensus 37 ~~gl~l~~vs-~ff~~~~vv~t~~~e~-----~p~e~a~~r~l~~mlit~pcliy~~~~v~gp~g~R----~~LiLRg~m 106 (346)
T KOG4510|consen 37 NLGLLLLTVS-YFFNSCMVVSTKVLEN-----DPMELASFRLLVRMLITYPCLIYYMQPVIGPEGKR----KWLILRGFM 106 (346)
T ss_pred ccCceehhhH-HHHhhHHHhhhhhhcc-----ChhHhhhhhhhhehhhhheEEEEEeeeeecCCCcE----EEEEeehhh
Confidence 3577777777 7777777888877553 44443333322222121111111111110100100 113344555
Q ss_pred HHHHHHHHHHHHhcchhHHHHHHhhhhhHHHhhhhHhhcCCccchhhHHHHHHHHHhHhhhhhhh
Q 018749 245 AFALNLAVFLLVGKTSALTMNVAGVVKDWLLIAFSWSVIKDTVTPINLFGYGLAFLGVAYYNHSK 309 (351)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~~s~~~~l~~v~~~~~~~~~~~e~~s~~~~~G~~li~~g~~l~~~~~ 309 (351)
++..-...|+...+.+-..+.++....|++++++++.+++|+.|....+|..+.+.|+.+..++.
T Consensus 107 G~tgvmlmyya~~~mslaDA~vItFssPvft~ifaw~~LkE~~t~~eaL~s~itl~GVVLIvRPp 171 (346)
T KOG4510|consen 107 GFTGVMLMYYALMYMSLADAVVITFSSPVFTIIFAWAFLKEPFTKFEALGSLITLLGVVLIVRPP 171 (346)
T ss_pred hhhHHHHHHHHHhhcchhheEEEEecChHHHHHHHHHHHcCCCcHHHHHHHHHhhheEEEEecCC
Confidence 55555566788899999999999999999999999999999999999999999999999976654
No 79
>COG5006 rhtA Threonine/homoserine efflux transporter [Amino acid transport and metabolism]
Probab=97.02 E-value=0.017 Score=49.77 Aligned_cols=126 Identities=15% Similarity=0.035 Sum_probs=83.1
Q ss_pred HHHHHHHHHHHHHHHHHHhhcccccccccHHHHHHHHHHHHHHHHHHHHHHhcccCCCCCChhhHhHHHHHHHHH-HHHH
Q 018749 21 YVAIWIFLSFTVIVYNKYILDKKMYNWPFPISLTMIHMSFCATLAFLLIKVFKFVEPVTMSRDLYFSSVVPIGAL-YSLS 99 (351)
Q Consensus 21 ~~~~~~~~~~~~~~~~K~~l~~~~~~~~~p~~~~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~~~ 99 (351)
+......++....+..|-+=. .-+ --.-+..-+.+++++.+++.... -.+.-..+.- ....+..+++ -.+.
T Consensus 152 ~Al~AG~~Wa~YIv~G~r~g~----~~~-g~~g~a~gm~vAaviv~Pig~~~--ag~~l~~p~l-l~laLgvavlSSalP 223 (292)
T COG5006 152 LALGAGACWALYIVLGQRAGR----AEH-GTAGVAVGMLVAALIVLPIGAAQ--AGPALFSPSL-LPLALGVAVLSSALP 223 (292)
T ss_pred HHHHHhHHHHHHHHHcchhcc----cCC-CchHHHHHHHHHHHHHhhhhhhh--cchhhcChHH-HHHHHHHHHHhcccc
Confidence 334444455555555555441 222 22335556667777777765411 1122222222 2223333333 3667
Q ss_pred HhhhhhhcccccHHHHHHHHHHHHHHHHHHHHHhccccccchhhHHHHHHHhhhh
Q 018749 100 LWLSNSAYIYLSVSFIQMLKALMPVAVYSIGVTFKKESFKSDTMCNMVSISVGVA 154 (351)
Q Consensus 100 ~~~~~~al~~~~~s~~~vi~~~~pi~~~ll~~~~~~e~~~~~~~~~~~l~~~Gv~ 154 (351)
+.+-..++...|.+...++.++.|.+-++.++++++|+++..||+++..++++..
T Consensus 224 YsLEmiAL~rlp~~~F~~LlSLePa~aAl~G~i~L~e~ls~~qwlaI~~ViaAsa 278 (292)
T COG5006 224 YSLEMIALRRLPARTFGTLLSLEPALAALSGLIFLGETLTLIQWLAIAAVIAASA 278 (292)
T ss_pred hHHHHHHHhhCChhHHHHHHHhhHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHh
Confidence 7778889999999999999999999999999999999999999999998888765
No 80
>PRK09541 emrE multidrug efflux protein; Reviewed
Probab=96.92 E-value=0.023 Score=43.19 Aligned_cols=54 Identities=17% Similarity=0.183 Sum_probs=42.2
Q ss_pred HHhcchh-HHHHHHhhhhhHHHhhhhHhhcCCccchhhHHHHHHHHHhHhhhhhh
Q 018749 255 LVGKTSA-LTMNVAGVVKDWLLIAFSWSVIKDTVTPINLFGYGLAFLGVAYYNHS 308 (351)
Q Consensus 255 ~~~~~~~-~~~s~~~~l~~v~~~~~~~~~~~e~~s~~~~~G~~li~~g~~l~~~~ 308 (351)
++++.+- ..+++..-+..+.+.+.|+++|||++|+.+++|+.+++.|+...+..
T Consensus 50 al~~ipl~iAYavw~GlG~v~~~l~g~~~f~e~~~~~~~~gi~lIi~GVi~l~l~ 104 (110)
T PRK09541 50 TLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPAIIGMMLICAGVLVINLL 104 (110)
T ss_pred HHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhcC
Confidence 3444432 34455556677888999999999999999999999999999987543
No 81
>PRK11431 multidrug efflux system protein; Provisional
Probab=96.90 E-value=0.022 Score=42.85 Aligned_cols=53 Identities=9% Similarity=0.071 Sum_probs=45.3
Q ss_pred HHHhcch-hHHHHHHhhhhhHHHhhhhHhhcCCccchhhHHHHHHHHHhHhhhh
Q 018749 254 LLVGKTS-ALTMNVAGVVKDWLLIAFSWSVIKDTVTPINLFGYGLAFLGVAYYN 306 (351)
Q Consensus 254 ~~~~~~~-~~~~s~~~~l~~v~~~~~~~~~~~e~~s~~~~~G~~li~~g~~l~~ 306 (351)
.++|+.+ ...+++..-+..+.+.+.|+++|||++|+.+++|+.+++.|+...+
T Consensus 48 ~al~~ip~gvaYAvW~GiG~v~~~lig~~~f~e~~~~~~~~gi~lIi~GVv~l~ 101 (105)
T PRK11431 48 WAMKSLPVGTAYAVWTGIGAVGAAITGIVLLGESASPARLLSLALIVAGIIGLK 101 (105)
T ss_pred HHHhhCCcHhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHhhh
Confidence 3455554 4567888889999999999999999999999999999999998754
No 82
>PRK10452 multidrug efflux system protein MdtJ; Provisional
Probab=96.89 E-value=0.0088 Score=46.09 Aligned_cols=55 Identities=11% Similarity=0.189 Sum_probs=42.7
Q ss_pred HHHhcchh-HHHHHHhhhhhHHHhhhhHhhcCCccchhhHHHHHHHHHhHhhhhhh
Q 018749 254 LLVGKTSA-LTMNVAGVVKDWLLIAFSWSVIKDTVTPINLFGYGLAFLGVAYYNHS 308 (351)
Q Consensus 254 ~~~~~~~~-~~~s~~~~l~~v~~~~~~~~~~~e~~s~~~~~G~~li~~g~~l~~~~ 308 (351)
..+++.+- ..+++..-+..+.+.+.|+++|||++|+.+++|+.++++|+...+..
T Consensus 49 ~al~~lplsiAYavw~GiG~v~~~~ig~~~f~E~~s~~~~~gi~lIi~GVi~l~l~ 104 (120)
T PRK10452 49 FAVKKIALGVAYALWEGIGILFITLFSVLLFDESLSLMKIAGLTTLVAGIVLIKSG 104 (120)
T ss_pred HHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHhhcC
Confidence 34455433 34455556777888999999999999999999999999999886543
No 83
>PF04657 DUF606: Protein of unknown function, DUF606; InterPro: IPR006750 This family contains uncharacterised bacterial proteins.
Probab=96.80 E-value=0.065 Score=42.57 Aligned_cols=105 Identities=13% Similarity=0.073 Sum_probs=76.0
Q ss_pred cHHHHHHHHHHHHHHHHHHHHHHhcccCCCCCChhhHhHHHHHHHHHHHHHHhhhhhhcccccHHHHHHHHHH-HHHHHH
Q 018749 49 FPISLTMIHMSFCATLAFLLIKVFKFVEPVTMSRDLYFSSVVPIGALYSLSLWLSNSAYIYLSVSFIQMLKAL-MPVAVY 127 (351)
Q Consensus 49 ~p~~~~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~al~~~~~s~~~vi~~~-~pi~~~ 127 (351)
.|+.-++.-+..+.+.+..+....+..+....+... +.....|++-.....+.......++++...++.-+ ..+...
T Consensus 29 s~~~as~i~~~~G~i~~~i~~~~~~~~~~~~~~~~p--~w~~lGG~lG~~~V~~~~~~vp~lG~~~~~~l~~~GQl~~sl 106 (138)
T PF04657_consen 29 SPLVASFISFGVGFILLLIILLITGRPSLASLSSVP--WWAYLGGLLGVFFVLSNIILVPRLGAALTTILIVAGQLIASL 106 (138)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHhcccccchhccCC--hHHhccHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHH
Confidence 499999999999998877777655543222222111 22444777777777788888888988887777644 566666
Q ss_pred HHHHH----hccccccchhhHHHHHHHhhhhe
Q 018749 128 SIGVT----FKKESFKSDTMCNMVSISVGVAI 155 (351)
Q Consensus 128 ll~~~----~~~e~~~~~~~~~~~l~~~Gv~l 155 (351)
+++.+ ..|++++..|.+++++.++|+.+
T Consensus 107 ~iD~fG~fg~~~~~~~~~r~lG~~l~i~Gv~L 138 (138)
T PF04657_consen 107 LIDHFGLFGAPKRPFSLRRILGLALMIAGVIL 138 (138)
T ss_pred HHHHccccCCCCCCCCHHHHHHHHHHHHHHhC
Confidence 77775 35788999999999999999864
No 84
>PF00893 Multi_Drug_Res: Small Multidrug Resistance protein; InterPro: IPR000390 Members of this family which have been characterised, belong to the small multidrug resistance (Smr) protein family and are integral membrane proteins. They confer resistance to a wide range of toxic compounds by removing them for the cells. The efflux is coupled to an influx of protons. An example is Escherichia coli mvrC P23895 from SWISSPROT which prevents the incorporation of methyl viologen into cells [] and is involved in ethidium bromide efflux [].; GO: 0016021 integral to membrane; PDB: 2I68_A.
Probab=96.79 E-value=0.011 Score=43.46 Aligned_cols=58 Identities=26% Similarity=0.193 Sum_probs=36.2
Q ss_pred HHHHHHHHHhhhhhhcccccHHHHHHHH-HHHHHHHHHHHHHhccccccchhhHHHHHH
Q 018749 92 IGALYSLSLWLSNSAYIYLSVSFIQMLK-ALMPVAVYSIGVTFKKESFKSDTMCNMVSI 149 (351)
Q Consensus 92 ~~l~~~~~~~~~~~al~~~~~s~~~vi~-~~~pi~~~ll~~~~~~e~~~~~~~~~~~l~ 149 (351)
...+++.+..+...+++.+|.+.+..+- ....+.+.+.+.+++||+++..|++++.++
T Consensus 35 ~~~~~~~s~~~l~~al~~lp~~vaYavw~g~g~v~~~~~~~~~f~E~~s~~~~~gi~lI 93 (93)
T PF00893_consen 35 AVVGYGLSFYFLSLALKKLPLSVAYAVWTGLGIVGVTLVGVFFFGESLSLSKWLGIGLI 93 (93)
T ss_dssp HHHHHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHH--------HHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHhheeeC
Confidence 4447888889999999999999997665 689999999999999999999999998763
No 85
>COG2076 EmrE Membrane transporters of cations and cationic drugs [Inorganic ion transport and metabolism]
Probab=96.74 E-value=0.016 Score=43.21 Aligned_cols=53 Identities=11% Similarity=0.087 Sum_probs=44.6
Q ss_pred HHhcch-hHHHHHHhhhhhHHHhhhhHhhcCCccchhhHHHHHHHHHhHhhhhh
Q 018749 255 LVGKTS-ALTMNVAGVVKDWLLIAFSWSVIKDTVTPINLFGYGLAFLGVAYYNH 307 (351)
Q Consensus 255 ~~~~~~-~~~~s~~~~l~~v~~~~~~~~~~~e~~s~~~~~G~~li~~g~~l~~~ 307 (351)
.+|+++ .+.+++..-...+.+.+.|+++|+|++++.+++|..++++|+..-+.
T Consensus 50 alk~ipvgvAYAiW~GiG~v~~~l~g~~~f~E~l~~~~~~gl~LiiaGvi~Lk~ 103 (106)
T COG2076 50 ALKTIPLGVAYAIWTGIGIVGTALVGVLLFGESLSLIKLLGLALILAGVIGLKL 103 (106)
T ss_pred HHhhCchHHHHHHHHHHHHHHHHHHHHHhcCCcCCHHHHHHHHHHHHHHHHhhh
Confidence 455554 45567888888899999999999999999999999999999987654
No 86
>KOG1441 consensus Glucose-6-phosphate/phosphate and phosphoenolpyruvate/phosphate antiporter [Carbohydrate transport and metabolism; Amino acid transport and metabolism]
Probab=96.45 E-value=0.0068 Score=54.87 Aligned_cols=142 Identities=10% Similarity=-0.039 Sum_probs=103.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhcccccccccHHHHHHHHHHHHHHHHH-HHHHHhcccCC---CCCChhhHhHHHH
Q 018749 15 ILLSYTYVAIWIFLSFTVIVYNKYILDKKMYNWPFPISLTMIHMSFCATLAF-LLIKVFKFVEP---VTMSRDLYFSSVV 90 (351)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~K~~l~~~~~~~~~p~~~~~~r~~~~~~~l~-~~~~~~~~~~~---~~~~~~~~~~~~~ 90 (351)
.......+.++.+..+.-..+.|.++.++.++++ ++.+..+.--++...++ |+......... ...+++--.....
T Consensus 161 n~~G~i~a~~s~~~~al~~I~~~~ll~~~~~~~~-~~~ll~y~ap~s~~~Ll~P~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (316)
T KOG1441|consen 161 NLFGFISAMISNLAFALRNILSKKLLTSKGESLN-SMNLLYYTAPISLIFLLIPFLDYVEGNKFVGFLTAPWFVTFLILL 239 (316)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHhhhccccccC-chHHHHHhhhHHHHHHhcchHhhhcccceeeeeccccchhhHHHH
Confidence 4566677778888888888899999965567788 87777777767777666 55432111111 1112221123344
Q ss_pred HHHHHHHHHHhhhhhhcccccHHHHHHHHHHHHHHHHHHHHHhccccccchhhHHHHHHHhhhheee
Q 018749 91 PIGALYSLSLWLSNSAYIYLSVSFIQMLKALMPVAVYSIGVTFKKESFKSDTMCNMVSISVGVAIAA 157 (351)
Q Consensus 91 ~~~l~~~~~~~~~~~al~~~~~s~~~vi~~~~pi~~~ll~~~~~~e~~~~~~~~~~~l~~~Gv~l~~ 157 (351)
..+++..+.+...+..+..+++=+.++.....=+.+...++++++++.+..+.+|..+.++|+.+..
T Consensus 240 ~~sv~~f~~Nls~f~~ig~tSalT~~V~g~~K~~~vi~~s~~iF~~pvt~~n~~G~~iai~Gv~~Y~ 306 (316)
T KOG1441|consen 240 LNSVLAFLLNLSAFLVIGRTSALTYSVAGHMKRIVVIVVSWLIFGNPVTFLNALGYAIAILGVFLYS 306 (316)
T ss_pred HHHHHHHHHHHHHHHHHcccCchhhhhhccceEEEEEEeEeeeecCCCchhhHHHHHHHHHHHHHHH
Confidence 4457777778888889999999999999888888888899999999999999999999999998754
No 87
>TIGR00803 nst UDP-galactose transporter. NSTs generally appear to function by antiport mechanisms, exchanging a nucleotide-sugar for a nucleotide. Thus, CMP-sialic acid is exchanged for CMP; GDP-mannose is preferentially exchanged for GMP, and UDP-galactose and UDP-N-acetylglucosamine are exchanged for UMP (or possibly UDP). Other nucleotide sugars (e.g., GDP-fucose, UDP-xylose, UDP-glucose, UDP-N-acetylgalactosamine, etc.) may also be transported in exchange for various nucleotides, but their transporters have not been molecularly characterized. Each compound appears to be translocated by its own transport protein. Transport allows the compound, synthesized in the cytoplasm, to be exported to the lumen of the Golgi apparatus or the endoplasmic reticulum where it is used for the synthesis of glycoproteins and glycolipids.
Probab=96.45 E-value=0.055 Score=46.77 Aligned_cols=67 Identities=12% Similarity=0.021 Sum_probs=59.4
Q ss_pred HHHHHHHHHHHHhhhhhhcccccHHHHHHHHHHHHHHHHHHHHHhccccccchhhHHHHHHHhhhhe
Q 018749 89 VVPIGALYSLSLWLSNSAYIYLSVSFIQMLKALMPVAVYSIGVTFKKESFKSDTMCNMVSISVGVAI 155 (351)
Q Consensus 89 ~~~~~l~~~~~~~~~~~al~~~~~s~~~vi~~~~pi~~~ll~~~~~~e~~~~~~~~~~~l~~~Gv~l 155 (351)
.....+..+....+..+.++|.+.....+...+.++++.+++.++++++++..++.|+.+.+.|+.+
T Consensus 155 ~~~~~~~~a~~~~~v~~vlk~~~~~~~~~~~~~~~~~s~lls~~~f~~~ls~~~~~g~~lV~~~~~l 221 (222)
T TIGR00803 155 VWIVGLLNVGGGLCIGGVVRYADNTTKSFVTALSIILSTLASVRLFDAKISSTFYLGAILVFLATFL 221 (222)
T ss_pred HHHHHHHHHhcCceeeehhHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCccHHHHHHHHHHHeeeEe
Confidence 3344556677778899999999999999999999999999999999999999999999999999764
No 88
>COG3238 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=96.41 E-value=0.22 Score=39.84 Aligned_cols=137 Identities=11% Similarity=-0.030 Sum_probs=85.3
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCChHHHHHHHhHHHHHHHHHHHHHhhchhhhhcCCCcchhHHHHHHHHH
Q 018749 165 SWGVVLQLGAVAFEATRLVMIQILLTSKGITLNPITSLYYVAPCCLVFLLVPWIFVELPILRETSSFHFDFVIFGTNSLC 244 (351)
Q Consensus 165 ~~G~~~~l~s~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (351)
++..+..+.+.++-.+..-..-++.+.. -+|..........+.+.+....+..+...... ......|+ ...++++
T Consensus 4 ~l~ll~~i~aG~~l~~Q~~iN~qL~~~~---~spl~As~isf~vGt~~L~~l~l~~~~~~~~a-~~~~~pwW-~~~GG~l 78 (150)
T COG3238 4 YLYLLFAILAGALLPLQAAINGRLARYL---GSPLLASLISFLVGTVLLLILLLIKQGHPGLA-AVASAPWW-AWIGGLL 78 (150)
T ss_pred HHHHHHHHHHhhhhhhHHHHHHHHHHHc---CChHHHHHHHHHHHHHHHHHHHHHhcCCCchh-hccCCchH-HHHccch
Confidence 4567788888888888888888876532 25777777777777777766655544332221 11222233 3444566
Q ss_pred HHHHHHHHHHHHhcchhHHHHHHhhh-hhHHHhhhhHhhcC----CccchhhHHHHHHHHHhHhhhh
Q 018749 245 AFALNLAVFLLVGKTSALTMNVAGVV-KDWLLIAFSWSVIK----DTVTPINLFGYGLAFLGVAYYN 306 (351)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~~s~~~~l-~~v~~~~~~~~~~~----e~~s~~~~~G~~li~~g~~l~~ 306 (351)
+..+-........+.+++..-.+-.. +-+.+.+++.+=+. .+++...++|+.++++|+++..
T Consensus 79 Ga~~vt~s~~l~p~lGa~~t~~l~i~gQli~glliD~fG~~g~~~~~~~~~r~lgi~L~l~gil~~~ 145 (150)
T COG3238 79 GAIFVTSSILLAPRLGAATTIALVIAGQLIMGLLIDHFGWFGVPKRPLNLPRILGILLVLAGILLAR 145 (150)
T ss_pred hhhhhhhhHHhccchhHHHHHHHHHHHHHHHHHHHHhhcccCCCcCCCCHHHHHHHHHHHHHHHHhc
Confidence 66555555566777777666554433 33444555554332 4589999999999999966643
No 89
>PF05653 Mg_trans_NIPA: Magnesium transporter NIPA; InterPro: IPR008521 This family consists of several eukaryotic proteins of unknown function.
Probab=96.38 E-value=0.042 Score=49.81 Aligned_cols=117 Identities=14% Similarity=0.019 Sum_probs=77.4
Q ss_pred cchhHHHHHHHHHHHHHHHHHHHHHHhhcCCCC-CChHHHHHHHhHHHHHHHHHHHHHhhchhhhhcCCCcchhHHHHHH
Q 018749 163 FDSWGVVLQLGAVAFEATRLVMIQILLTSKGIT-LNPITSLYYVAPCCLVFLLVPWIFVELPILRETSSFHFDFVIFGTN 241 (351)
Q Consensus 163 ~~~~G~~~~l~s~~~~a~~~v~~~~~~~~~~~~-~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (351)
+...|+.+++.++++.+...+++|+-..+.+.+ ...-+.. ........ |+.-...
T Consensus 4 ~~~iGv~lav~ss~~~~~g~~lqk~~~~r~~~~~~~~~~~~--------------------~~~l~~~~----W~~G~~~ 59 (300)
T PF05653_consen 4 DFYIGVLLAVVSSIFIAVGFNLQKKSHLRLPRGSLRAGSGG--------------------RSYLRRPL----WWIGLLL 59 (300)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccccchh--------------------hHHHhhHH----HHHHHHH
Confidence 457899999999999999999999976643321 1000000 00000000 1111111
Q ss_pred HHHHHHHHHHHHHHHhcchhHHHHHHhhhhhHHHhhhhHhhcCCccchhhHHHHHHHHHhHhhhh
Q 018749 242 SLCAFALNLAVFLLVGKTSALTMNVAGVVKDWLLIAFSWSVIKDTVTPINLFGYGLAFLGVAYYN 306 (351)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~s~~~~l~~v~~~~~~~~~~~e~~s~~~~~G~~li~~g~~l~~ 306 (351)
...+.. ..+.++...++...+.++.+.-++..+++..+++|+++...+.|..+++.|..+.-
T Consensus 60 ~~~g~~---~~~~Al~~ap~slv~Plg~~~lv~~~~~a~~~l~e~~~~~~~~G~~l~i~G~~liv 121 (300)
T PF05653_consen 60 MVLGEI---LNFVALGFAPASLVAPLGALSLVFNAVLARFFLGEKLTRRDIVGCALIILGSVLIV 121 (300)
T ss_pred HhcchH---HHHHHHHhhhHHHHHHHHhhhhhhHHHHhHHHhcccchHhHHhhHHHHHhhheeeE
Confidence 122222 23444566777778888888899999999999999999999999999999997643
No 90
>KOG2234 consensus Predicted UDP-galactose transporter [Carbohydrate transport and metabolism]
Probab=96.30 E-value=0.15 Score=46.38 Aligned_cols=138 Identities=18% Similarity=0.180 Sum_probs=91.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhcCCCCCChHHHHHHHhHHHHHHHHHHHHHhhch---h-hhhcCC--C--cchhHHHHH
Q 018749 169 VLQLGAVAFEATRLVMIQILLTSKGITLNPITSLYYVAPCCLVFLLVPWIFVELP---I-LRETSS--F--HFDFVIFGT 240 (351)
Q Consensus 169 ~~~l~s~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~---~-~~~~~~--~--~~~~~~~~~ 240 (351)
+..+...+-++......|...++++.++.+....+..-..-.++.+...+..+.. . ....+. + ......+.+
T Consensus 18 ~~l~~~t~~~~~l~l~l~ys~~~~~~~f~~tt~v~~~Ei~Kl~~c~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~lk~~v 97 (345)
T KOG2234|consen 18 LSLIVLTAQNTALTLLLRYSRTREKPMFLPTTAVFLTEVIKLVFCLFLLLFEERKYAKKSLKSLSKEILAAPRETLKVSV 97 (345)
T ss_pred HHHHHHHHHHhhHHHHHHHHhcCCCCCcchhHHHHHHHHHHHHHHHHHHHHHhhHHhhhhhhhcCHHHHhChHHHHHHHH
Confidence 4444445555555555555544444456666666655554444433333322211 0 000010 0 012344555
Q ss_pred HHHHHHHHHHHHHHHHhcchhHHHHHHhhhhhHHHhhhhHhhcCCccchhhHHHHHHHHHhHhhhh
Q 018749 241 NSLCAFALNLAVFLLVGKTSALTMNVAGVVKDWLLIAFSWSVIKDTVTPINLFGYGLAFLGVAYYN 306 (351)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~s~~~~l~~v~~~~~~~~~~~e~~s~~~~~G~~li~~g~~l~~ 306 (351)
..++....|...+....+.+|.++.+...++...+.+++.++++++++..||...++...|+.+..
T Consensus 98 Pa~iYalqNnl~yval~~ldaatyqVt~qlKI~tTA~f~vl~L~rkLs~~Qw~Al~lL~~Gv~~vQ 163 (345)
T KOG2234|consen 98 PALIYALQNNLQYVALSNLDAATYQVTYQLKILTTAIFSVLILRRKLSRLQWMALVLLFAGVALVQ 163 (345)
T ss_pred HHHHHHHhhhHHHHHHhcCCchhhhhhhhHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHh
Confidence 666777777788889999999999999999999999999999999999999999999999998866
No 91
>PF10639 UPF0546: Uncharacterised protein family UPF0546; InterPro: IPR018908 This family of proteins has no known function. Many members are annotated as potential transmembrane proteins.
Probab=96.26 E-value=0.01 Score=45.02 Aligned_cols=66 Identities=20% Similarity=0.010 Sum_probs=56.3
Q ss_pred HHHHHHHHHHhhhhhhcccccHHHHHHHH-HHHHHHHHHHHHHhccccccchhhHHHHHHHhhhhee
Q 018749 91 PIGALYSLSLWLSNSAYIYLSVSFIQMLK-ALMPVAVYSIGVTFKKESFKSDTMCNMVSISVGVAIA 156 (351)
Q Consensus 91 ~~~l~~~~~~~~~~~al~~~~~s~~~vi~-~~~pi~~~ll~~~~~~e~~~~~~~~~~~l~~~Gv~l~ 156 (351)
..-+.+-.+...+++.+...+.|.+.-+. ++.=+++++.++++.+|..+++.++|+.+.++|+.+.
T Consensus 46 ipf~lNq~GSv~f~~~L~~~dlSlavPi~Nsl~fvfT~l~g~~lge~~~~~~~~~G~~Li~~Gv~Lc 112 (113)
T PF10639_consen 46 IPFLLNQSGSVLFFLLLGSADLSLAVPIANSLAFVFTALTGWLLGEEVISRRTWLGMALILAGVALC 112 (113)
T ss_pred HHHHHHHHHHHHHHHHHhcCCceeeehHHhHHHHHHHHHHHHHhcCcccchhHHHHHHHHHcCeeee
Confidence 34445666677788899999999998885 8889999999999999989999999999999999764
No 92
>PF00893 Multi_Drug_Res: Small Multidrug Resistance protein; InterPro: IPR000390 Members of this family which have been characterised, belong to the small multidrug resistance (Smr) protein family and are integral membrane proteins. They confer resistance to a wide range of toxic compounds by removing them for the cells. The efflux is coupled to an influx of protons. An example is Escherichia coli mvrC P23895 from SWISSPROT which prevents the incorporation of methyl viologen into cells [] and is involved in ethidium bromide efflux [].; GO: 0016021 integral to membrane; PDB: 2I68_A.
Probab=95.34 E-value=0.064 Score=39.44 Aligned_cols=46 Identities=13% Similarity=0.005 Sum_probs=24.9
Q ss_pred HHHHhcchhHHH-HHHhhhhhHHHhhhhHhhcCCccchhhHHHHHHH
Q 018749 253 FLLVGKTSALTM-NVAGVVKDWLLIAFSWSVIKDTVTPINLFGYGLA 298 (351)
Q Consensus 253 ~~~~~~~~~~~~-s~~~~l~~v~~~~~~~~~~~e~~s~~~~~G~~li 298 (351)
..++|+.+...+ ++..-+..+...+.|.++|||++|+.+++|+.++
T Consensus 47 ~~al~~lp~~vaYavw~g~g~v~~~~~~~~~f~E~~s~~~~~gi~lI 93 (93)
T PF00893_consen 47 SLALKKLPLSVAYAVWTGLGIVGVTLVGVFFFGESLSLSKWLGIGLI 93 (93)
T ss_dssp HHHH-------HHHHHHHHHHHHHHHHHHHHH--------HHHHHHH
T ss_pred HHHHhhcchHHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHhheeeC
Confidence 345677655443 6666788899999999999999999999999875
No 93
>PRK13499 rhamnose-proton symporter; Provisional
Probab=95.34 E-value=0.3 Score=44.95 Aligned_cols=138 Identities=12% Similarity=-0.048 Sum_probs=80.3
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCChHHHHHHHhHHHHHHHHHH--HHHhhchhhhhcCCCc-chhHHHHH
Q 018749 164 DSWGVVLQLGAVAFEATRLVMIQILLTSKGITLNPITSLYYVAPCCLVFLLVP--WIFVELPILRETSSFH-FDFVIFGT 240 (351)
Q Consensus 164 ~~~G~~~~l~s~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--~~~~~~~~~~~~~~~~-~~~~~~~~ 240 (351)
...|+++.+++.+|++.+.+-+||. + .-++|...-...+-.-++.+. ....++.........+ ..+...++
T Consensus 5 ~~~G~~~~~i~~~~~GS~~~p~K~~-k-----~w~wE~~W~v~gi~~wl~~~~~~g~~~~~~f~~~~~~~~~~~~~~~~l 78 (345)
T PRK13499 5 IILGIIWHLIGGASSGSFYAPFKKV-K-----KWSWETMWSVGGIFSWLILPWLIAALLLPDFWAYYSSFSGSTLLPVFL 78 (345)
T ss_pred hHHHHHHHHHHHHHhhccccccccc-C-----CCchhHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHhcCHHHHHHHHH
Confidence 3579999999999999999988883 2 123333321111101111111 1111221111111111 22344555
Q ss_pred HHHHHHHHHHHHHHHHhcchhH-HHHHHhhhhhHHHhhhhHhhcCCc-------cchhhHHHHHHHHHhHhhhhh
Q 018749 241 NSLCAFALNLAVFLLVGKTSAL-TMNVAGVVKDWLLIAFSWSVIKDT-------VTPINLFGYGLAFLGVAYYNH 307 (351)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~-~~s~~~~l~~v~~~~~~~~~~~e~-------~s~~~~~G~~li~~g~~l~~~ 307 (351)
++++--..|...+..+++.+-. ...+..-+..+.+++++.+++||= -....++|.+++++|+.+..+
T Consensus 79 ~G~~W~iG~i~~~~s~~~iGvS~~~pIs~Gl~lv~gtL~~~i~~gew~~~~~t~~g~~~~~gv~liliGi~l~s~ 153 (345)
T PRK13499 79 FGALWGIGGITYGLTMRYLGMSLGIGIAIGITLIVGTLMPPIINGNFDVLLATNGGRMTLLGVLVALIGVAIVGR 153 (345)
T ss_pred HHHHHHhhhhhHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHccccccccccchHHHHHHHHHHHHHHHHHHHH
Confidence 5555555566667777776543 344555667788889999988852 234578899999999998776
No 94
>KOG2765 consensus Predicted membrane protein [Function unknown]
Probab=94.90 E-value=0.27 Score=45.01 Aligned_cols=143 Identities=17% Similarity=0.083 Sum_probs=94.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhcccccccccHHHHHHHHHHHHHHHH----HHHHHHhcccCCCCCChhhHhHHHH
Q 018749 15 ILLSYTYVAIWIFLSFTVIVYNKYILDKKMYNWPFPISLTMIHMSFCATLA----FLLIKVFKFVEPVTMSRDLYFSSVV 90 (351)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~K~~l~~~~~~~~~p~~~~~~r~~~~~~~l----~~~~~~~~~~~~~~~~~~~~~~~~~ 90 (351)
....-++...-....+....+-|.-.+++..+.+-|.++.+.-. +..+++ .++.+ ++ .++-..|....+..++
T Consensus 245 ~llG~llaL~sA~~YavY~vllk~~~~~eg~rvdi~lffGfvGL-fnllllwP~l~iL~~-~~-~e~F~lP~~~q~~~vv 321 (416)
T KOG2765|consen 245 PLLGNLLALLSALLYAVYTVLLKRKIGDEGERVDIQLFFGFVGL-FNLLLLWPPLIILDF-FG-EERFELPSSTQFSLVV 321 (416)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHhhcccccccccHHHHHHHHHH-HHHHHHhHHHHHHHH-hc-cCcccCCCCceeEeee
Confidence 33444444444444555666667777655456776777665544 333333 33333 22 2333334332233333
Q ss_pred HHH-HHHHHHHhhhhhhcccccHHHHHHHHHHHHHHHHHHHHHhccccccchhhHHHHHHHhhhheeeecC
Q 018749 91 PIG-ALYSLSLWLSNSAYIYLSVSFIQMLKALMPVAVYSIGVTFKKESFKSDTMCNMVSISVGVAIAAYGE 160 (351)
Q Consensus 91 ~~~-l~~~~~~~~~~~al~~~~~s~~~vi~~~~pi~~~ll~~~~~~e~~~~~~~~~~~l~~~Gv~l~~~~~ 160 (351)
..+ +.....-.++-+|.-.++.-++++-.+.+....++...++.++.++...++|.+.+++|.+.+...+
T Consensus 322 ~~~ligtvvSDylW~~a~~lTs~Lv~TlgmSltIPLA~~aD~l~k~~~~S~~~iiGsi~Ifv~Fv~vn~~~ 392 (416)
T KOG2765|consen 322 FNNLIGTVVSDYLWAKAVLLTSPLVVTLGMSLTIPLAMFADVLIKGKHPSALYIIGSIPIFVGFVIVNISS 392 (416)
T ss_pred HhhHHHHHHHHHHHHHHHHhccchhheeeeeEeeeHHHHHHHHHcCCCCCHHHHHHHHHHHHHHhheeccc
Confidence 333 4457788889999999998888888888888888999999999999999999999999999887654
No 95
>COG3238 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=94.65 E-value=1 Score=36.07 Aligned_cols=133 Identities=11% Similarity=0.004 Sum_probs=77.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhcccccccccHHHHHHHHHHHHHHHHHHHHHHhcccCCCCCChhhHhHHHHHHHHHHHH
Q 018749 19 YTYVAIWIFLSFTVIVYNKYILDKKMYNWPFPISLTMIHMSFCATLAFLLIKVFKFVEPVTMSRDLYFSSVVPIGALYSL 98 (351)
Q Consensus 19 ~~~~~~~~~~~~~~~~~~K~~l~~~~~~~~~p~~~~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 98 (351)
++..+..+.+.....-+|-.+- +....|..-.+.-+..+..++..+....+..+.....++.-++ .+..|++-+.
T Consensus 7 ll~~i~aG~~l~~Q~~iN~qL~----~~~~spl~As~isf~vGt~~L~~l~l~~~~~~~~a~~~~~pwW-~~~GG~lGa~ 81 (150)
T COG3238 7 LLFAILAGALLPLQAAINGRLA----RYLGSPLLASLISFLVGTVLLLILLLIKQGHPGLAAVASAPWW-AWIGGLLGAI 81 (150)
T ss_pred HHHHHHHhhhhhhHHHHHHHHH----HHcCChHHHHHHHHHHHHHHHHHHHHHhcCCCchhhccCCchH-HHHccchhhh
Confidence 3334444444444555555555 2444599999999999988877776642222222211222223 3444444333
Q ss_pred HHhhhhhhcccccHHHHH-HHHHHHHHHHHHHHHH-h---ccccccchhhHHHHHHHhhhhee
Q 018749 99 SLWLSNSAYIYLSVSFIQ-MLKALMPVAVYSIGVT-F---KKESFKSDTMCNMVSISVGVAIA 156 (351)
Q Consensus 99 ~~~~~~~al~~~~~s~~~-vi~~~~pi~~~ll~~~-~---~~e~~~~~~~~~~~l~~~Gv~l~ 156 (351)
...........+.+.... +...-.-+.-+++..+ + -+++++..++.++++.++|+.+.
T Consensus 82 ~vt~s~~l~p~lGa~~t~~l~i~gQli~glliD~fG~~g~~~~~~~~~r~lgi~L~l~gil~~ 144 (150)
T COG3238 82 FVTSSILLAPRLGAATTIALVIAGQLIMGLLIDHFGWFGVPKRPLNLPRILGILLVLAGILLA 144 (150)
T ss_pred hhhhhHHhccchhHHHHHHHHHHHHHHHHHHHHhhcccCCCcCCCCHHHHHHHHHHHHHHHHh
Confidence 333333444445544444 4445566677777765 2 25778999999999999996554
No 96
>KOG1581 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]
Probab=94.41 E-value=0.49 Score=42.16 Aligned_cols=137 Identities=5% Similarity=-0.026 Sum_probs=98.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhcccccccccHHHHHHHHHHHHHHHHHHHHHHhcccC-CC---CCChhhHhHHHH
Q 018749 15 ILLSYTYVAIWIFLSFTVIVYNKYILDKKMYNWPFPISLTMIHMSFCATLAFLLIKVFKFVE-PV---TMSRDLYFSSVV 90 (351)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~K~~l~~~~~~~~~p~~~~~~r~~~~~~~l~~~~~~~~~~~-~~---~~~~~~~~~~~~ 90 (351)
....+..+..+.+.=+....-++.+++ .++.+ ++.+.+.--+...+.........+... .. +.. ++..++++
T Consensus 170 s~~G~~Ll~~~L~fDgfTn~tQd~lf~--~~k~s-~~~mM~~vNLf~~i~~~~~li~qg~~~~av~F~~~h-p~~~~Di~ 245 (327)
T KOG1581|consen 170 SPIGILLLFGYLLFDGFTNATQDSLFK--KYKVS-SLHMMFGVNLFSAILNGTYLILQGHLLPAVSFIKEH-PDVAFDIL 245 (327)
T ss_pred chHhHHHHHHHHHHHhhHHhHHHHHhc--cCCcc-HhHHHHHHHHHHHHHHHHhhhcCCCCchHHHHHHcC-hhHHHHHH
Confidence 345555566666655555556666664 46676 777777777666666555433222211 11 111 23467888
Q ss_pred HHHHHHHHHHhhhhhhcccccHHHHHHHHHHHHHHHHHHHHHhccccccchhhHHHHHHHhhhhe
Q 018749 91 PIGALYSLSLWLSNSAYIYLSVSFIQMLKALMPVAVYSIGVTFKKESFKSDTMCNMVSISVGVAI 155 (351)
Q Consensus 91 ~~~l~~~~~~~~~~~al~~~~~s~~~vi~~~~pi~~~ll~~~~~~e~~~~~~~~~~~l~~~Gv~l 155 (351)
..+.+-+.+..+.+.-++.-.+=+.+++..+.=++++.++.+.++.+.++.||.++.+.+.|+.+
T Consensus 246 l~s~~gavGQ~FI~~TI~~FGslt~t~I~ttRk~~si~lS~i~f~h~~s~~q~~g~~iVFg~i~l 310 (327)
T KOG1581|consen 246 LYSTCGAVGQLFIFYTIERFGSLTFTTIMTTRKMVSIMLSCIVFGHPLSSEQWLGVLIVFGGIFL 310 (327)
T ss_pred HHHHhhhhhhheehhhHhhcccHHHHHHHHHHHHHHHHHHHHHhCCccchhhccCeeeehHHHHH
Confidence 99999988888888888877777778888999999999999999999999999999999888765
No 97
>KOG1580 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]
Probab=94.08 E-value=0.15 Score=43.48 Aligned_cols=63 Identities=8% Similarity=-0.051 Sum_probs=54.6
Q ss_pred HHHHHHHHhcchhHHHHHHhhhhhHHHhhhhHhhcCCccchhhHHHHHHHHHhHhhhhhhhhh
Q 018749 249 NLAVFLLVGKTSALTMNVAGVVKDWLLIAFSWSVIKDTVTPINLFGYGLAFLGVAYYNHSKLQ 311 (351)
Q Consensus 249 ~~~~~~~~~~~~~~~~s~~~~l~~v~~~~~~~~~~~e~~s~~~~~G~~li~~g~~l~~~~~~~ 311 (351)
..+.+.+++..+--+.-+-..-+|+-..++|+++.+...+|....-..++++|+.++.+.+.+
T Consensus 99 MVssN~Alq~vpYPTqVlgKScKPIPVMilGVl~~~KsY~w~kY~cVL~IV~GValFmYK~~K 161 (337)
T KOG1580|consen 99 MVSSNQALQYVPYPTQVLGKSCKPIPVMILGVLFAHKSYHWRKYCCVLMIVVGVALFMYKENK 161 (337)
T ss_pred HHhccchhcccCCcHHHhcccCCCcceeeeehhhhcccccHHHHHHHHHHHHHHHHhhccccc
Confidence 355677888888777778889999999999999999999999999999999999998876543
No 98
>COG5070 VRG4 Nucleotide-sugar transporter [Carbohydrate transport and metabolism / Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion]
Probab=91.78 E-value=1.9 Score=36.80 Aligned_cols=128 Identities=11% Similarity=0.060 Sum_probs=92.0
Q ss_pred HHHHHHHHHHHHHHHHHHHhhcccccccccHHHHHHHHHHHHHHHHHHHHHHhcccCCC----CCChhhHhHHHHHHHHH
Q 018749 20 TYVAIWIFLSFTVIVYNKYILDKKMYNWPFPISLTMIHMSFCATLAFLLIKVFKFVEPV----TMSRDLYFSSVVPIGAL 95 (351)
Q Consensus 20 ~~~~~~~~~~~~~~~~~K~~l~~~~~~~~~p~~~~~~r~~~~~~~l~~~~~~~~~~~~~----~~~~~~~~~~~~~~~l~ 95 (351)
+++..-...+..+.+.-|...+ -.+|. -..-.++.-+++..++..+........+. ..+... ....++.|++
T Consensus 158 ~Wm~~NclssaafVL~mrkri~--ltNf~-d~dtmfYnNllslPiL~~~s~~~edws~~n~annl~~d~-l~am~ISgl~ 233 (309)
T COG5070 158 LWMFTNCLSSAAFVLIMRKRIK--LTNFK-DFDTMFYNNLLSLPILLSFSFLFEDWSPGNLANNLSVDS-LMAMFISGLC 233 (309)
T ss_pred EEEehhhHhHHHHHHHHHHhhc--ccccc-hhhHHHHhhhHHHHHHHHHHHHhccCCcchhhcCCChHH-HHHHHHHHHH
Confidence 3344445566666666666653 34565 66778999999988877776655443322 233332 3456777888
Q ss_pred HHHHHhhhhhhcccccHHHHHHHHHHHHHHHHHHHHHhccccccchhhHHHHHHHh
Q 018749 96 YSLSLWLSNSAYIYLSVSFIQMLKALMPVAVYSIGVTFKKESFKSDTMCNMVSISV 151 (351)
Q Consensus 96 ~~~~~~~~~~al~~~~~s~~~vi~~~~pi~~~ll~~~~~~e~~~~~~~~~~~l~~~ 151 (351)
-.+-..+.-|...-++...+++..++.-....+-+.+++++..+...+.++.+++.
T Consensus 234 svgiSy~saWcvrVtSSTtySMvGALNKlp~alaGlvffdap~nf~si~sillGfl 289 (309)
T COG5070 234 SVGISYCSAWCVRVTSSTTYSMVGALNKLPIALAGLVFFDAPVNFLSIFSILLGFL 289 (309)
T ss_pred HhhhhhccceeEeehhhhHHHHHHHhhhChHHHhhhhhcCCchhHHHHHHHHHHHH
Confidence 88888888999999999999999999988889999999999888888777766544
No 99
>KOG1444 consensus Nucleotide-sugar transporter VRG4/SQV-7 [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]
Probab=91.75 E-value=1.2 Score=40.10 Aligned_cols=136 Identities=13% Similarity=0.047 Sum_probs=87.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhcccccccccHHHHHHHHHHHHHHHHHHHHHHhcccC-----CCCCChhhHhHHHHHH
Q 018749 18 SYTYVAIWIFLSFTVIVYNKYILDKKMYNWPFPISLTMIHMSFCATLAFLLIKVFKFVE-----PVTMSRDLYFSSVVPI 92 (351)
Q Consensus 18 ~~~~~~~~~~~~~~~~~~~K~~l~~~~~~~~~p~~~~~~r~~~~~~~l~~~~~~~~~~~-----~~~~~~~~~~~~~~~~ 92 (351)
...+.....+.........|...+ ..++. -+.+.++..++..+.+..+....+..+ ....+....+-.+.+.
T Consensus 158 gY~w~~~n~~~~a~~~v~~kk~vd--~~~l~-~~~lv~yNnl~~L~~l~~~~~~~ge~~~l~~~~~~~~~~~~~~~~~lS 234 (314)
T KOG1444|consen 158 GYSWALANCLTTAAFVVYVKKSVD--SANLN-KFGLVFYNNLLSLPPLLILSFITGELDALSLNFDNWSDSSVLVVMLLS 234 (314)
T ss_pred hHHHHHHHHHHHHHHHHHHHHhhc--ccccc-ceeEEeehhHHHHHHHHHHHHHhcchHHHHhhcccccchhHHHHHHHH
Confidence 456667777777888888888876 33444 556777888777777666654444322 1111111222334444
Q ss_pred HHHHHHHHhhhhhhcccccHHHHHHHHHHHHHHHHHHHHHhccccccchhhHHHHHHHhhhhee
Q 018749 93 GALYSLSLWLSNSAYIYLSVSFIQMLKALMPVAVYSIGVTFKKESFKSDTMCNMVSISVGVAIA 156 (351)
Q Consensus 93 ~l~~~~~~~~~~~al~~~~~s~~~vi~~~~pi~~~ll~~~~~~e~~~~~~~~~~~l~~~Gv~l~ 156 (351)
+++-.+-+.+..+..+..++...++.....-..+.+...++.+++.++...+|+.++++|-.+.
T Consensus 235 cv~gf~isy~s~~ct~~~SAtT~tivG~~n~l~t~l~~ll~~d~~~~~~n~~gll~~~~ggv~Y 298 (314)
T KOG1444|consen 235 CVMGFGISYTSFLCTRVNSATTTTIVGAKNKLLTYLGGLLFGDKPFTFLNVIGLLVGFFGGVLY 298 (314)
T ss_pred HHHHHHHHHHHHHHHhhccccceeehhhhhhHHHHHHHHhcCCceechhhhHHHHHHhhhhhHH
Confidence 4444556677778888888888887776666666666677778888888888888777776553
No 100
>PF06379 RhaT: L-rhamnose-proton symport protein (RhaT); InterPro: IPR004673 These proteins are members of the L-Rhamnose Symporter (RhaT) family. This family includes two characterised members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.; GO: 0015153 rhamnose transmembrane transporter activity, 0008645 hexose transport, 0016021 integral to membrane
Probab=91.24 E-value=7.6 Score=35.53 Aligned_cols=138 Identities=12% Similarity=0.067 Sum_probs=68.5
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCChHHHHHHHhHHHHHHHHHHHH-Hhhchhh---hhcCCCcchhHHHHH
Q 018749 165 SWGVVLQLGAVAFEATRLVMIQILLTSKGITLNPITSLYYVAPCCLVFLLVPWI-FVELPIL---RETSSFHFDFVIFGT 240 (351)
Q Consensus 165 ~~G~~~~l~s~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~~~~~---~~~~~~~~~~~~~~~ 240 (351)
..|+++..+++++.+.+.+=.||. +.=++|.......+-.-+..|... ...-|+. ....+....+...+.
T Consensus 6 i~Gii~h~iGg~~~~sfy~P~kkv------k~WsWEs~Wlv~gi~swli~P~~~a~l~ip~~~~i~~~~~~~~l~~~~l~ 79 (344)
T PF06379_consen 6 ILGIIFHAIGGFASGSFYVPFKKV------KGWSWESYWLVQGIFSWLIVPWLWALLAIPDFFSIYSATPASTLFWTFLF 79 (344)
T ss_pred HHHHHHHHHHHHHhhhhccchhhc------CCccHHHHHHHHHHHHHHHHHHHHHHHhCCcHHHHHHhCChhHHHHHHHH
Confidence 579999999999999988888886 223555554444333333334321 1222222 111221221222222
Q ss_pred HHHHHHHHHHHHHHHHhcch-hHHHHHHhhhhhHHHhhhhHhh-------cCCccchhhHHHHHHHHHhHhhhhhhh
Q 018749 241 NSLCAFALNLAVFLLVGKTS-ALTMNVAGVVKDWLLIAFSWSV-------IKDTVTPINLFGYGLAFLGVAYYNHSK 309 (351)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~-~~~~s~~~~l~~v~~~~~~~~~-------~~e~~s~~~~~G~~li~~g~~l~~~~~ 309 (351)
+.+-+.. +..+=..+++++ +...++.--+..++..++--++ ++++-....++|.+++++|+.+..+.-
T Consensus 80 G~lWGIG-gltfGl~mryLGvSLG~sI~lGl~~~~GTlippi~~g~~~~l~~~~~g~~vL~Gv~v~LiGIai~g~AG 155 (344)
T PF06379_consen 80 GVLWGIG-GLTFGLAMRYLGVSLGQSIALGLCAVFGTLIPPIFQGTFDELLATPSGQIVLLGVAVCLIGIAICGKAG 155 (344)
T ss_pred HHHHhcc-hhhHhHHHHHHhHHHHHHHHHHHHHHHhhchHHHHcCcccccccCCCchhhhhHHHHHHHHHHHHhHHH
Confidence 2221111 111112334432 2333333333444444443333 223345578999999999999876543
No 101
>PF10639 UPF0546: Uncharacterised protein family UPF0546; InterPro: IPR018908 This family of proteins has no known function. Many members are annotated as potential transmembrane proteins.
Probab=91.11 E-value=0.52 Score=35.84 Aligned_cols=52 Identities=21% Similarity=0.349 Sum_probs=38.8
Q ss_pred HHHHhcchhHHH-HHHhhhhhHHHhhhhHhhcCCccchhhHHHHHHHHHhHhh
Q 018749 253 FLLVGKTSALTM-NVAGVVKDWLLIAFSWSVIKDTVTPINLFGYGLAFLGVAY 304 (351)
Q Consensus 253 ~~~~~~~~~~~~-s~~~~l~~v~~~~~~~~~~~e~~s~~~~~G~~li~~g~~l 304 (351)
+..+++.+-+.+ -+.+.+.-+++++.++++..|..+...++|+.+++.|+.+
T Consensus 59 ~~~L~~~dlSlavPi~Nsl~fvfT~l~g~~lge~~~~~~~~~G~~Li~~Gv~L 111 (113)
T PF10639_consen 59 FLLLGSADLSLAVPIANSLAFVFTALTGWLLGEEVISRRTWLGMALILAGVAL 111 (113)
T ss_pred HHHHhcCCceeeehHHhHHHHHHHHHHHHHhcCcccchhHHHHHHHHHcCeee
Confidence 444555543333 3345777889999998888778899999999999999864
No 102
>KOG4314 consensus Predicted carbohydrate/phosphate translocator [General function prediction only]
Probab=90.71 E-value=0.25 Score=41.06 Aligned_cols=64 Identities=16% Similarity=0.123 Sum_probs=56.9
Q ss_pred HHHHHHHHHhcchhHHHHHHhhhhhHHHhhhhHhhcCCccchhhHHHHHHHHHhHhhhhhhhhh
Q 018749 248 LNLAVFLLVGKTSALTMNVAGVVKDWLLIAFSWSVIKDTVTPINLFGYGLAFLGVAYYNHSKLQ 311 (351)
Q Consensus 248 ~~~~~~~~~~~~~~~~~s~~~~l~~v~~~~~~~~~~~e~~s~~~~~G~~li~~g~~l~~~~~~~ 311 (351)
.|+.+..++++++|+.++....-+..+..+++++.+|+++....++..++.+.|+.+..+..+.
T Consensus 66 aNY~Yl~AL~~is~s~asai~~CNaAFVfiLa~IVL~D~~~~~kIlaailAI~GiVmiay~DN~ 129 (290)
T KOG4314|consen 66 ANYLYLLALKKISASDASAIFACNAAFVFILAIIVLGDRFMGFKILAAILAIGGIVMIAYADNE 129 (290)
T ss_pred CCcHHHHHHHhcChhhhHHHHHhhHHHHHHHHHHHhccchhhhhHHHHHHHhCcEEEEEeccch
Confidence 4555677899999999999999999999999999999999999999999999999987765543
No 103
>COG4975 GlcU Putative glucose uptake permease [Carbohydrate transport and metabolism]
Probab=89.77 E-value=0.24 Score=42.71 Aligned_cols=98 Identities=15% Similarity=0.166 Sum_probs=68.4
Q ss_pred HHHHHHHHHHHHHHHHHHhcccCCCCCChhhHhHHHHHHHHHHHHHHhhhhhhcccccHHHHHHHHHHHHHHHHHHHHHh
Q 018749 54 TMIHMSFCATLAFLLIKVFKFVEPVTMSRDLYFSSVVPIGALYSLSLWLSNSAYIYLSVSFIQMLKALMPVAVYSIGVTF 133 (351)
Q Consensus 54 ~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~al~~~~~s~~~vi~~~~pi~~~ll~~~~ 133 (351)
..+-.+++.+++.+..-..+. .++.++. .+.-.+.|+..+..+.+...|-+...+++.--+..+..+...+-+.++
T Consensus 181 aiLPqAiGMv~~ali~~~~~~--~~~~~K~--t~~nii~G~~Wa~GNl~ml~a~~~~GvAt~FSlSQlgViisTiGGIl~ 256 (288)
T COG4975 181 AILPQAIGMVIGALILGFFKM--EKRFNKY--TWLNIIPGLIWAIGNLFMLLAAQKVGVATSFSLSQLGVIISTIGGILF 256 (288)
T ss_pred hhhHHHHHHHHHHHHHhhccc--ccchHHH--HHHHHhhHHHHHhhHHHHHHhhhhhceeeeeeHhhheeeeeecceEEE
Confidence 444455666655554432221 2222222 345667788999999999999999888888888889999999999999
Q ss_pred ccccccchhhH----HHHHHHhhhhe
Q 018749 134 KKESFKSDTMC----NMVSISVGVAI 155 (351)
Q Consensus 134 ~~e~~~~~~~~----~~~l~~~Gv~l 155 (351)
+|||-+++++. ++++.+.|..+
T Consensus 257 L~ekKtkkEm~~v~iGiilivvgai~ 282 (288)
T COG4975 257 LGEKKTKKEMVYVIIGIILIVVGAIL 282 (288)
T ss_pred EeccCchhhhhhhhhhHHHHHHHhhh
Confidence 99999999854 44555555443
No 104
>KOG3912 consensus Predicted integral membrane protein [General function prediction only]
Probab=88.35 E-value=12 Score=33.34 Aligned_cols=68 Identities=21% Similarity=0.198 Sum_probs=56.5
Q ss_pred HHHHHHHHHHHHHHHHHHHhcchhHHHHHHhhhhhHHHhhhhHhhcCCccchhhHHHHHHHHHhHhhh
Q 018749 238 FGTNSLCAFALNLAVFLLVGKTSALTMNVAGVVKDWLLIAFSWSVIKDTVTPINLFGYGLAFLGVAYY 305 (351)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~l~~v~~~~~~~~~~~e~~s~~~~~G~~li~~g~~l~ 305 (351)
+....++-...+...+..+..++++..-+..-...++.-+++.-+++.+++..||+|+..++.|+...
T Consensus 89 fl~Pal~Di~gsslm~vgL~lTsASsfQMlRGaviIFvglfst~~Ln~ti~~~qWl~i~fv~lGlviV 156 (372)
T KOG3912|consen 89 FLPPALCDIAGSSLMYVGLNLTSASSFQMLRGAVIIFVGLFSTMFLNRTITGRQWLGILFVSLGLVIV 156 (372)
T ss_pred ecChHHHHHhhhHHHHHHHHHhhHHHHHHhhcchhhhhHHHHHHHHhcccchhhHHHHHHHHhhhhee
Confidence 33455555555666677788888988888888888999999999999999999999999999999764
No 105
>PRK02237 hypothetical protein; Provisional
Probab=83.04 E-value=8.1 Score=28.91 Aligned_cols=47 Identities=15% Similarity=0.113 Sum_probs=39.1
Q ss_pred HHHHHhhhhhHHHhhhhHhhcCCccchhhHHHHHHHHHhHhhhhhhh
Q 018749 263 TMNVAGVVKDWLLIAFSWSVIKDTVTPINLFGYGLAFLGVAYYNHSK 309 (351)
Q Consensus 263 ~~s~~~~l~~v~~~~~~~~~~~e~~s~~~~~G~~li~~g~~l~~~~~ 309 (351)
.++..+-+-.+.++++++.+-|++++...++|..++++|..+..+..
T Consensus 61 vYAAYGGvyI~~Sl~W~w~vdg~~Pd~~D~iGa~v~L~G~~iI~~~p 107 (109)
T PRK02237 61 VYAAYGGVYVAGSLLWLWVVDGVRPDRWDWIGAAICLVGMAVIMYAP 107 (109)
T ss_pred HHHHhhhHHHHHHHHHHHHhcCcCCChhHHHhHHHHHHhHHHheecC
Confidence 44555666678889999999999999999999999999998765543
No 106
>PF02694 UPF0060: Uncharacterised BCR, YnfA/UPF0060 family; InterPro: IPR003844 This entry describes integral membrane proteins of unknown function.; GO: 0016020 membrane
Probab=81.08 E-value=7.4 Score=29.04 Aligned_cols=47 Identities=17% Similarity=0.162 Sum_probs=39.4
Q ss_pred HHHHHhhhhhHHHhhhhHhhcCCccchhhHHHHHHHHHhHhhhhhhh
Q 018749 263 TMNVAGVVKDWLLIAFSWSVIKDTVTPINLFGYGLAFLGVAYYNHSK 309 (351)
Q Consensus 263 ~~s~~~~l~~v~~~~~~~~~~~e~~s~~~~~G~~li~~g~~l~~~~~ 309 (351)
.++..+-+-.+.++++++.+-+++++...++|..++++|..+..+..
T Consensus 59 vYAAYGGvfI~~Sl~W~w~vdg~~Pd~~D~iGa~i~L~G~~iI~~~P 105 (107)
T PF02694_consen 59 VYAAYGGVFIVASLLWGWLVDGVRPDRWDWIGAAICLVGVAIILFAP 105 (107)
T ss_pred HHHHhhhhHHHHHHHHHhhhcCcCCChHHHHhHHHHHHhHHheEecC
Confidence 44555666678899999999999999999999999999998876543
No 107
>PF10225 DUF2215: Uncharacterized conserved protein (DUF2215); InterPro: IPR024233 This entry represents a domain that is found in a number of different proteins, including a family of transmembrane proteins.
Probab=78.96 E-value=41 Score=29.59 Aligned_cols=43 Identities=12% Similarity=-0.093 Sum_probs=28.1
Q ss_pred HHHHhcchhHHHHHHhhhhhHHHhhhhHhhcCCccchhhHHHH
Q 018749 253 FLLVGKTSALTMNVAGVVKDWLLIAFSWSVIKDTVTPINLFGY 295 (351)
Q Consensus 253 ~~~~~~~~~~~~s~~~~l~~v~~~~~~~~~~~e~~s~~~~~G~ 295 (351)
..+.++-++......+.++-.+.++-..+++.-.-+...-.++
T Consensus 113 ~vcy~~gp~~~~rs~~~v~W~Lqligl~lI~~ss~~~~~a~~~ 155 (249)
T PF10225_consen 113 AVCYRYGPPVDPRSRNFVKWALQLIGLVLIYFSSQDPEFAFAA 155 (249)
T ss_pred HhhcccCCCccHhHHHHHHHHHHHHHHHHHHHHcCcHHHHHHH
Confidence 3455678888888888888888877777766544444333333
No 108
>KOG2922 consensus Uncharacterized conserved protein [Function unknown]
Probab=75.88 E-value=0.97 Score=40.65 Aligned_cols=118 Identities=13% Similarity=0.076 Sum_probs=75.3
Q ss_pred ccchhHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCChHHHHHHHhHHHHHHHHHHHHHhhch-hhhhcCCCcchhHHHHH
Q 018749 162 KFDSWGVVLQLGAVAFEATRLVMIQILLTSKGITLNPITSLYYVAPCCLVFLLVPWIFVELP-ILRETSSFHFDFVIFGT 240 (351)
Q Consensus 162 ~~~~~G~~~~l~s~~~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 240 (351)
.++..|.++++.|++..+...++.||...+.+. ...+ ..+++ ... . ...|+.-.+
T Consensus 17 ~d~~~G~~LaissS~~Ig~sfilkKkgl~r~~~--~~~r------------------a~~gg~~yl--~--~~~Ww~G~l 72 (335)
T KOG2922|consen 17 SDNIIGLVLAISSSIFIGSSFILKKKGLKRAGA--SGLR------------------AGEGGYGYL--K--EPLWWAGML 72 (335)
T ss_pred cCceeeeeehhhccEEEeeehhhhHHHHHHHhh--hccc------------------ccCCCcchh--h--hHHHHHHHH
Confidence 356778999999999988888888876553110 0000 00110 000 0 111333222
Q ss_pred HHHHHHHHHHHHHHHHhcchhHHHHHHhhhhhHHHhhhhHhhcCCccchhhHHHHHHHHHhHhhhh
Q 018749 241 NSLCAFALNLAVFLLVGKTSALTMNVAGVVKDWLLIAFSWSVIKDTVTPINLFGYGLAFLGVAYYN 306 (351)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~s~~~~l~~v~~~~~~~~~~~e~~s~~~~~G~~li~~g~~l~~ 306 (351)
.-..+=..| |.+...-++.-.+.++.+.-+.+.+++..+++|++++...+|++++++|..+.-
T Consensus 73 tm~vGei~N---FaAYaFAPasLVtPLGAlsvi~saila~~~L~Ekl~~~g~lGc~l~v~Gst~iV 135 (335)
T KOG2922|consen 73 TMIVGEIAN---FAAYAFAPASLVTPLGALSVIISAILASFFLKEKLNLLGILGCVLCVVGSTTIV 135 (335)
T ss_pred HHHHHhHhh---HHHHhhchHhhhccchhHHHHHHHHHHHHHHHHHHHHhhhhheeEEecccEEEE
Confidence 333333333 333455667777777788889999999999999999999999999999987654
No 109
>PF02694 UPF0060: Uncharacterised BCR, YnfA/UPF0060 family; InterPro: IPR003844 This entry describes integral membrane proteins of unknown function.; GO: 0016020 membrane
Probab=75.49 E-value=4.5 Score=30.17 Aligned_cols=40 Identities=20% Similarity=0.083 Sum_probs=34.0
Q ss_pred HHHHHHHHHHHHHhccccccchhhHHHHHHHhhhheeeec
Q 018749 120 ALMPVAVYSIGVTFKKESFKSDTMCNMVSISVGVAIAAYG 159 (351)
Q Consensus 120 ~~~pi~~~ll~~~~~~e~~~~~~~~~~~l~~~Gv~l~~~~ 159 (351)
....+...+..+.+.|+||++..+++..++++|+.++.+.
T Consensus 65 GvfI~~Sl~W~w~vdg~~Pd~~D~iGa~i~L~G~~iI~~~ 104 (107)
T PF02694_consen 65 GVFIVASLLWGWLVDGVRPDRWDWIGAAICLVGVAIILFA 104 (107)
T ss_pred hhHHHHHHHHHhhhcCcCCChHHHHhHHHHHHhHHheEec
Confidence 3456677788889999999999999999999999887654
No 110
>PRK02237 hypothetical protein; Provisional
Probab=74.88 E-value=5.1 Score=29.96 Aligned_cols=40 Identities=10% Similarity=-0.045 Sum_probs=33.5
Q ss_pred HHHHHHHHHHHHHhccccccchhhHHHHHHHhhhheeeec
Q 018749 120 ALMPVAVYSIGVTFKKESFKSDTMCNMVSISVGVAIAAYG 159 (351)
Q Consensus 120 ~~~pi~~~ll~~~~~~e~~~~~~~~~~~l~~~Gv~l~~~~ 159 (351)
....+...+..+.+.|+||+...+++..++++|+.++.+.
T Consensus 67 GvyI~~Sl~W~w~vdg~~Pd~~D~iGa~v~L~G~~iI~~~ 106 (109)
T PRK02237 67 GVYVAGSLLWLWVVDGVRPDRWDWIGAAICLVGMAVIMYA 106 (109)
T ss_pred hHHHHHHHHHHHHhcCcCCChhHHHhHHHHHHhHHHheec
Confidence 3456666788899999999999999999999999876543
No 111
>KOG1442 consensus GDP-fucose transporter [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]
Probab=74.48 E-value=7.6 Score=34.35 Aligned_cols=120 Identities=12% Similarity=-0.027 Sum_probs=78.5
Q ss_pred HHHHHHHhhcccccccccHHHHHHHHHHHHHHHHHHHHHHhcccC----CCCCChhhHhHHHHHHHHHHHHHHhhhhhhc
Q 018749 32 VIVYNKYILDKKMYNWPFPISLTMIHMSFCATLAFLLIKVFKFVE----PVTMSRDLYFSSVVPIGALYSLSLWLSNSAY 107 (351)
Q Consensus 32 ~~~~~K~~l~~~~~~~~~p~~~~~~r~~~~~~~l~~~~~~~~~~~----~~~~~~~~~~~~~~~~~l~~~~~~~~~~~al 107 (351)
..+..|..+. .--+.-+.++++..+.+.++.+++....+..+ -++.+-.+++..+.+.|++.+.......+-+
T Consensus 200 naiytkk~l~---~v~~~iw~lt~ynnv~a~lLflpll~lnge~~~v~~~~~l~a~~Fw~~mtLsglfgF~mgyvTg~QI 276 (347)
T KOG1442|consen 200 NAIYTKKVLP---PVGDCIWRLTAYNNVNALLLFLPLLILNGEFQAVVGFPHLPAIKFWILMTLSGLFGFAMGYVTGWQI 276 (347)
T ss_pred HHHhhheecc---cccCeehhhHHHHHHHHHHHHHHHHHHcchHHHHcCcccchHHHHHHHHHHHHHHHHHhhheeeEEE
Confidence 3445555553 22334577899999888888777766555433 2344334444445555666566666666777
Q ss_pred ccccHHHHHHHHHHHHHHHHHHHHHhccccccchhhHHHHHHHhhhh
Q 018749 108 IYLSVSFIQMLKALMPVAVYSIGVTFKKESFKSDTMCNMVSISVGVA 154 (351)
Q Consensus 108 ~~~~~s~~~vi~~~~pi~~~ll~~~~~~e~~~~~~~~~~~l~~~Gv~ 154 (351)
+.+++=++.+.......-=.++++.+++|..+...|-+.++.+.|..
T Consensus 277 K~TSplThnISgTAka~aQTvlAv~~y~E~ks~lwwtsn~~vLvgs~ 323 (347)
T KOG1442|consen 277 KVTSPLTHNISGTAKAAAQTVLAVAYYSETKSGLWWTSNIVVLVGSL 323 (347)
T ss_pred EecccceeeecHhHHHHHHHHHHHHHHHHHhhhheeeeeEEEEehhH
Confidence 77777777776666666677888889999988888887776666543
No 112
>PF04342 DUF486: Protein of unknown function, DUF486; InterPro: IPR007437 This family contains several proteins of uncharacterised function.
Probab=72.56 E-value=4.5 Score=30.08 Aligned_cols=29 Identities=14% Similarity=0.120 Sum_probs=24.9
Q ss_pred hhhhHhhcCCccchhhHHHHHHHHHhHhh
Q 018749 276 IAFSWSVIKDTVTPINLFGYGLAFLGVAY 304 (351)
Q Consensus 276 ~~~~~~~~~e~~s~~~~~G~~li~~g~~l 304 (351)
+.++.++++|++++.++.|..+++.+++.
T Consensus 77 ~~Fsv~~l~E~l~~n~l~af~~i~~av~f 105 (108)
T PF04342_consen 77 APFSVFYLGEPLKWNYLWAFLCILGAVYF 105 (108)
T ss_pred HHHHHHHhCCCccHHHHHHHHHHHHhhhe
Confidence 45688899999999999999999888654
No 113
>KOG4831 consensus Unnamed protein [Function unknown]
Probab=72.52 E-value=4.6 Score=29.98 Aligned_cols=64 Identities=13% Similarity=0.012 Sum_probs=49.3
Q ss_pred HHHHHHHHhhhhhhcccccHHHHHHHH-HHHHHHHHHHHHHhccccccchhhHHHHHHHhhhhee
Q 018749 93 GALYSLSLWLSNSAYIYLSVSFIQMLK-ALMPVAVYSIGVTFKKESFKSDTMCNMVSISVGVAIA 156 (351)
Q Consensus 93 ~l~~~~~~~~~~~al~~~~~s~~~vi~-~~~pi~~~ll~~~~~~e~~~~~~~~~~~l~~~Gv~l~ 156 (351)
-+.+-....++++-++..|.+.+.-+. ++.-.|+.+.+..+..|....+.+++..+.++|+.+.
T Consensus 59 FllNqcgSaly~~tLa~a~islavpv~nsltfafta~~G~~LGE~~~g~~a~lGt~liv~Gi~Lc 123 (125)
T KOG4831|consen 59 FLLNQCGSALYYLTLASAPISLAVPVTNSLTFAFTAIFGKALGEETQGGLALLGTSLIVFGIWLC 123 (125)
T ss_pred HHHHHhhHHHHHHHHhcCCceeeeeecchhHHHHHHHHHHHhccccccceeehhhhHHhhhhhhe
Confidence 334444566677788888877766554 5678899999998888888889999999999998764
No 114
>PF07168 Ureide_permease: Ureide permease; InterPro: IPR009834 This entry represents ureide permease, which transports a wide spectrum of oxo derivatives of heterocyclic nitrogen compounds, including allantoin, uric acid and xanthine, but not adenine. Transport is dependent on glucose and a proton gradient [].
Probab=72.32 E-value=4.9 Score=35.99 Aligned_cols=34 Identities=9% Similarity=0.145 Sum_probs=19.7
Q ss_pred HHHhhhhHhhcCCccc--hhhHHHHHHHHHhHhhhhh
Q 018749 273 WLLIAFSWSVIKDTVT--PINLFGYGLAFLGVAYYNH 307 (351)
Q Consensus 273 v~~~~~~~~~~~e~~s--~~~~~G~~li~~g~~l~~~ 307 (351)
++.+++.++ .+.+.+ ..-+.|..++++++++-..
T Consensus 111 VlGv~~NYf-ld~~~n~a~iLF~GV~cf~iAI~lga~ 146 (336)
T PF07168_consen 111 VLGVTLNYF-LDPKINRAEILFPGVACFLIAIILGAA 146 (336)
T ss_pred EEeeeeeee-ccCCCCCceEEEccHHHHHHHHHHHHH
Confidence 344444553 344454 2456688888888877443
No 115
>COG1742 Uncharacterized conserved protein [Function unknown]
Probab=71.50 E-value=6.3 Score=29.17 Aligned_cols=40 Identities=13% Similarity=0.014 Sum_probs=33.2
Q ss_pred HHHHHHHHHHHHhccccccchhhHHHHHHHhhhheeeecC
Q 018749 121 LMPVAVYSIGVTFKKESFKSDTMCNMVSISVGVAIAAYGE 160 (351)
Q Consensus 121 ~~pi~~~ll~~~~~~e~~~~~~~~~~~l~~~Gv~l~~~~~ 160 (351)
...+...+..+++.+.++++..|.+..++++|+.++..+.
T Consensus 67 vyI~~sL~W~~~Vdg~~pdr~D~~Ga~icl~G~~vil~~p 106 (109)
T COG1742 67 VYIAASLAWLWVVDGVRPDRYDWIGAAICLAGVAVILFGP 106 (109)
T ss_pred hHHHHHHHHHHHHcCcCCcHHHhhhHHHHHhceeeeEeCC
Confidence 4455666778889999999999999999999988876653
No 116
>COG3169 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=70.49 E-value=12 Score=27.47 Aligned_cols=39 Identities=15% Similarity=0.219 Sum_probs=30.2
Q ss_pred HhhhhhHHH----hhhhHhhcCCccchhhHHHHHHHHHhHhhh
Q 018749 267 AGVVKDWLL----IAFSWSVIKDTVTPINLFGYGLAFLGVAYY 305 (351)
Q Consensus 267 ~~~l~~v~~----~~~~~~~~~e~~s~~~~~G~~li~~g~~l~ 305 (351)
...++.+.+ +.+|.+.++|++.+.++.|..+++.|+...
T Consensus 71 LK~mQEVItL~iFv~Fsvfyl~epl~~~~l~a~~~i~gav~fi 113 (116)
T COG3169 71 LKTMQEVITLAIFVPFSVFYLKEPLRWNYLWAFLLILGAVYFI 113 (116)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCcchHHHHHHHHHHHHHHHHh
Confidence 344455544 447999999999999999999998887653
No 117
>KOG1583 consensus UDP-N-acetylglucosamine transporter [Carbohydrate transport and metabolism]
Probab=70.30 E-value=14 Score=32.74 Aligned_cols=141 Identities=11% Similarity=0.030 Sum_probs=79.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccccccHHHHHHHHHHHHHHHHHHHHH-------HhcccCCCCCChh
Q 018749 11 VIKKILLSYTYVAIWIFLSFTVIVYNKYILDKKMYNWPFPISLTMIHMSFCATLAFLLIK-------VFKFVEPVTMSRD 83 (351)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~~~~K~~l~~~~~~~~~p~~~~~~r~~~~~~~l~~~~~-------~~~~~~~~~~~~~ 83 (351)
....-...+....+..+.|+-+.+.++...+ ++|=+ |--..|+--++..+..+.... .....++-..|..
T Consensus 158 ~~~~w~iGi~lL~~al~~sa~mgiyqE~~Y~--kyGKh-~~EalFytH~LsLP~Flf~~~div~~~~~~~~se~~~~p~~ 234 (330)
T KOG1583|consen 158 DFFWWLIGIALLVFALLLSAYMGIYQETTYQ--KYGKH-WKEALFYTHFLSLPLFLFMGDDIVSHWRLAFKSESYLIPLL 234 (330)
T ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HhcCC-hHHHHHHHHHhccchHHHhcchHHHHHHHHhcCcceecccc
Confidence 4455566666777788888888888888886 23333 555566666555444333221 0000111111111
Q ss_pred hHhHHHHHHHHHH-HHHHhhhhhhcccc-------cHHHHHHHHHHHHHHHHHHHHHhccccccchhhHHHHHHHhhhhe
Q 018749 84 LYFSSVVPIGALY-SLSLWLSNSAYIYL-------SVSFIQMLKALMPVAVYSIGVTFKKESFKSDTMCNMVSISVGVAI 155 (351)
Q Consensus 84 ~~~~~~~~~~l~~-~~~~~~~~~al~~~-------~~s~~~vi~~~~pi~~~ll~~~~~~e~~~~~~~~~~~l~~~Gv~l 155 (351)
...+|....| ....+.++...+++ +.=++++...+.=.+..+++.+.++..+++..|+|..+.++|.++
T Consensus 235 ---g~~vP~~~~yLl~n~L~Qy~CikgVy~L~te~~sLTVTlvltlRKFvSLl~SiiyF~Npft~~h~lGa~lVF~Gt~~ 311 (330)
T KOG1583|consen 235 ---GFKVPSMWVYLLFNVLTQYFCIKGVYILTTETSSLTVTLVLTLRKFVSLLFSIIYFENPFTPWHWLGAALVFFGTLL 311 (330)
T ss_pred ---CccccHHHHHHHHHHHHHHHHHHhhhhhhceecceEEEEeeeHHHHHHHhheeeEecCCCCHHHHHHHHHHHHHHHH
Confidence 1113333333 22333344444332 222233444566678888999999999999999999999999887
Q ss_pred ee
Q 018749 156 AA 157 (351)
Q Consensus 156 ~~ 157 (351)
..
T Consensus 312 fa 313 (330)
T KOG1583|consen 312 FA 313 (330)
T ss_pred HH
Confidence 54
No 118
>PF04342 DUF486: Protein of unknown function, DUF486; InterPro: IPR007437 This family contains several proteins of uncharacterised function.
Probab=68.22 E-value=48 Score=24.78 Aligned_cols=33 Identities=18% Similarity=0.184 Sum_probs=26.8
Q ss_pred HHHHHHHHHhccccccchhhHHHHHHHhhhhee
Q 018749 124 VAVYSIGVTFKKESFKSDTMCNMVSISVGVAIA 156 (351)
Q Consensus 124 i~~~ll~~~~~~e~~~~~~~~~~~l~~~Gv~l~ 156 (351)
.....++++++||++++....+.++.++++..+
T Consensus 74 ~vF~~Fsv~~l~E~l~~n~l~af~~i~~av~fi 106 (108)
T PF04342_consen 74 VVFAPFSVFYLGEPLKWNYLWAFLCILGAVYFI 106 (108)
T ss_pred heeHHHHHHHhCCCccHHHHHHHHHHHHhhhee
Confidence 344567788999999999999999888887654
No 119
>COG3274 Predicted O-acyltransferase [General function prediction only]
Probab=67.27 E-value=39 Score=30.75 Aligned_cols=148 Identities=12% Similarity=0.148 Sum_probs=70.5
Q ss_pred CCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHH-HHhhcccccccccHHHHHHHHHHHHHHHHHHHHHHhcccCCCCC
Q 018749 2 GKGGSLSDGVIKKILLSYTYVAIWIFLSFTVIVYN-KYILDKKMYNWPFPISLTMIHMSFCATLAFLLIKVFKFVEPVTM 80 (351)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-K~~l~~~~~~~~~p~~~~~~r~~~~~~~l~~~~~~~~~~~~~~~ 80 (351)
||-.+.++..++.....+.+.++..++.+.++-.| ...+. +-+++|.+.-.|= +.+.+....+....+. ..+.
T Consensus 67 ~e~s~q~~~f~ri~l~~if~sii~~~~isl~~~~n~e~~l~---~il~~p~~yhlWf-lf~i~~iYLi~pLi~~--~~v~ 140 (332)
T COG3274 67 GERSAQPKLFLRIGLSLIFYSIIIWFWISLFTPINFEFALK---NILQKPVFYHLWF-LFAILGIYLISPLIQV--ILVS 140 (332)
T ss_pred ccccccHHHHHHHHHHHHHHHHHHHHHHHHhccccHHHHHH---HHhcCCchHHHHH-HHHHHHHHHHHHHHHH--HHHh
Confidence 34445666676655555555444444444444444 33332 2233344322221 1222222222211111 1122
Q ss_pred ChhhHhHHHHHHHHHHHHHHhhhhhhcccccHHHHHHHHHHHHHHHHHHHHHhccccccch--hhHHHHHHHhhhhe
Q 018749 81 SRDLYFSSVVPIGALYSLSLWLSNSAYIYLSVSFIQMLKALMPVAVYSIGVTFKKESFKSD--TMCNMVSISVGVAI 155 (351)
Q Consensus 81 ~~~~~~~~~~~~~l~~~~~~~~~~~al~~~~~s~~~vi~~~~pi~~~ll~~~~~~e~~~~~--~~~~~~l~~~Gv~l 155 (351)
.++......+..-+.++......+-.+.+.+.....--....++.-.+++..+..++...+ .+.+..+..+|+++
T Consensus 141 ~~~~~i~~~~l~I~~~~~~l~~~~~~~~~~~~~l~~~~~~f~yi~Y~ilG~~l~~~~~~~~~~~~~a~~l~~~~~~~ 217 (332)
T COG3274 141 NRKLLILIYLLLIVFNASTLPFLYGGFSWLPIDLYIYGDTFYYILYYILGRYLGTRQTQGKKISRLALALFVLGVIF 217 (332)
T ss_pred hHHHHHHHHHHHhhhhcccchhhhcccccCCcchhhhCCchHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHH
Confidence 2222222232333333444444455556667777766667777777788877665444444 66777777777655
No 120
>TIGR00892 2A0113 monocarboxylate transporter 1.
Probab=60.82 E-value=1.6e+02 Score=28.23 Aligned_cols=15 Identities=7% Similarity=-0.237 Sum_probs=6.8
Q ss_pred hhhHHHHHHHHHhHh
Q 018749 289 PINLFGYGLAFLGVA 303 (351)
Q Consensus 289 ~~~~~G~~li~~g~~ 303 (351)
...+++.++.+++.+
T Consensus 401 ~~f~~~~~~~li~~~ 415 (455)
T TIGR00892 401 YIFYASGSIVVSAGL 415 (455)
T ss_pred hHHHHhhHHHHHHHH
Confidence 344444444444444
No 121
>PF05297 Herpes_LMP1: Herpesvirus latent membrane protein 1 (LMP1); InterPro: IPR007961 This family consists of several latent membrane protein 1 or LMP1s mostly from Epstein-Barr virus (strain GD1) (HHV-4) (Human herpesvirus 4). LMP1 of HHV-4 is a 62-65 kDa plasma membrane protein possessing six membrane spanning regions, a short cytoplasmic N terminus and a long cytoplasmic carboxy tail of 200 amino acids. HHV-4 virus latent membrane protein 1 (LMP1) is essential for HHV-4 mediated transformation and has been associated with several cases of malignancies. HHV-4-like viruses in Macaca fascicularis (Cynomolgus monkeys) have been associated with high lymphoma rates in immunosuppressed monkeys [].; GO: 0019087 transformation of host cell by virus, 0016021 integral to membrane; PDB: 1CZY_E 1ZMS_B.
Probab=58.44 E-value=3.2 Score=36.56 Aligned_cols=67 Identities=12% Similarity=0.068 Sum_probs=0.0
Q ss_pred cccccHHHHHHHHHHHHHHHHH-HHHHhcccc-ccchhhHHHHHHHhhhheeeecC--cccchhHHHHHHH
Q 018749 107 YIYLSVSFIQMLKALMPVAVYS-IGVTFKKES-FKSDTMCNMVSISVGVAIAAYGE--AKFDSWGVVLQLG 173 (351)
Q Consensus 107 l~~~~~s~~~vi~~~~pi~~~l-l~~~~~~e~-~~~~~~~~~~l~~~Gv~l~~~~~--~~~~~~G~~~~l~ 173 (351)
++-.+-+...++.+...+.+++ +-+.++|+| +-..-.+|++++++-+.+...-. .+.-++|+++.++
T Consensus 44 msd~t~~a~~vl~sfAvvliiIIiIImlF~RrLLCPLGlLCiilimi~lLv~~L~tLtGQ~LF~Gi~~l~l 114 (381)
T PF05297_consen 44 MSDLTQGALTVLYSFAVVLIIIIIIIMLFKRRLLCPLGLLCIILIMIVLLVSMLWTLTGQTLFVGIVILFL 114 (381)
T ss_dssp -----------------------------------------------------------------------
T ss_pred HhccccchHHHHHHHHHHHHHHHHHHHHHHHhhcCcchHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHH
Confidence 3334444445555544443333 333445555 45666777777776655544322 2223456544433
No 122
>PF08507 COPI_assoc: COPI associated protein; InterPro: IPR013714 Proteins in this family co-localise with COPI vesicle coat proteins []. In yeast it is a Golgi membrane protein involved in vesicular trafficking, interacting with TVP18 [].
Probab=48.73 E-value=24 Score=27.81 Aligned_cols=29 Identities=21% Similarity=0.236 Sum_probs=13.9
Q ss_pred hhhhHhhcCCccchhhHHHHHHHHHhHhhh
Q 018749 276 IAFSWSVIKDTVTPINLFGYGLAFLGVAYY 305 (351)
Q Consensus 276 ~~~~~~~~~e~~s~~~~~G~~li~~g~~l~ 305 (351)
+++|.+.+++ --...++|..+...|+...
T Consensus 75 if~G~l~~~~-~~~~~i~g~~~~~~G~~~i 103 (136)
T PF08507_consen 75 IFLGTLCLGQ-SILSIIIGLLLFLVGVIYI 103 (136)
T ss_pred HHHHHHHHhh-HHHHHHHHHHHHHHHHHHH
Confidence 3344444444 2233455666666666543
No 123
>PF11044 TMEMspv1-c74-12: Plectrovirus spv1-c74 ORF 12 transmembrane protein; InterPro: IPR022743 This is a group of proteins expressed by Plectroviruses. The Plectroviruses are single-stranded DNA viruses belonging to the Inoviridae. This entry represents putative transmembrane proteins of unknown function.
Probab=48.46 E-value=46 Score=20.41 Aligned_cols=16 Identities=19% Similarity=0.075 Sum_probs=7.4
Q ss_pred chhhHHHHHHHHHhHh
Q 018749 288 TPINLFGYGLAFLGVA 303 (351)
Q Consensus 288 s~~~~~G~~li~~g~~ 303 (351)
+|..++-.+++++|++
T Consensus 3 ~wlt~iFsvvIil~If 18 (49)
T PF11044_consen 3 TWLTTIFSVVIILGIF 18 (49)
T ss_pred hHHHHHHHHHHHHHHH
Confidence 4444444444444443
No 124
>COG1742 Uncharacterized conserved protein [Function unknown]
Probab=48.42 E-value=19 Score=26.68 Aligned_cols=46 Identities=20% Similarity=0.161 Sum_probs=37.5
Q ss_pred HHHHhhhhhHHHhhhhHhhcCCccchhhHHHHHHHHHhHhhhhhhh
Q 018749 264 MNVAGVVKDWLLIAFSWSVIKDTVTPINLFGYGLAFLGVAYYNHSK 309 (351)
Q Consensus 264 ~s~~~~l~~v~~~~~~~~~~~e~~s~~~~~G~~li~~g~~l~~~~~ 309 (351)
++-.+-+-.+.++++.++.=+..++...++|..++++|..+..+..
T Consensus 61 YAAYGGvyI~~sL~W~~~Vdg~~pdr~D~~Ga~icl~G~~vil~~p 106 (109)
T COG1742 61 YAAYGGVYIAASLAWLWVVDGVRPDRYDWIGAAICLAGVAVILFGP 106 (109)
T ss_pred HHHhcchHHHHHHHHHHHHcCcCCcHHHhhhHHHHHhceeeeEeCC
Confidence 4445556678889999999999999999999999999987766543
No 125
>KOG4812 consensus Golgi-associated protein/Nedd4 WW domain-binding protein [General function prediction only]
Probab=46.49 E-value=74 Score=27.59 Aligned_cols=20 Identities=10% Similarity=0.115 Sum_probs=15.7
Q ss_pred cchhhHHHHHHHHHhHhhhh
Q 018749 287 VTPINLFGYGLAFLGVAYYN 306 (351)
Q Consensus 287 ~s~~~~~G~~li~~g~~l~~ 306 (351)
.+...|++-+++++|.++..
T Consensus 219 ~n~q~wLwwi~~vlG~ll~l 238 (262)
T KOG4812|consen 219 FNGQYWLWWIFLVLGLLLFL 238 (262)
T ss_pred cccchHHHHHHHHHHHHHHH
Confidence 45578999999999988754
No 126
>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily. EntS exports the siderophore enterobactin out of the cell. The genetic locus entS was changed from ybdA so as to reflect its relevant biological function [].
Probab=44.10 E-value=3.3e+02 Score=26.92 Aligned_cols=26 Identities=8% Similarity=-0.093 Sum_probs=14.3
Q ss_pred hcchhHHHHHHhhhhhHHHhhhhHhh
Q 018749 257 GKTSALTMNVAGVVKDWLLIAFSWSV 282 (351)
Q Consensus 257 ~~~~~~~~s~~~~l~~v~~~~~~~~~ 282 (351)
.+..+....+.....|+-+.+.|.+.
T Consensus 342 GRv~si~~~~~~g~~~lGsll~G~la 367 (524)
T PF05977_consen 342 GRVFSIYQMVFFGGMPLGSLLWGFLA 367 (524)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33444444555555566666667654
No 127
>PF09656 PGPGW: Putative transmembrane protein (PGPGW); InterPro: IPR019099 This entry represents proteins that contain three predicted transmembrane helices and an unusual motif with consensus sequence PGPGW.
Probab=43.95 E-value=85 Score=20.29 Aligned_cols=45 Identities=18% Similarity=0.214 Sum_probs=33.7
Q ss_pred hhhHHHHHHHhhhheeeecCcccchhHHHHHHHHHHHHHHHHHHHHHHhh
Q 018749 141 DTMCNMVSISVGVAIAAYGEAKFDSWGVVLQLGAVAFEATRLVMIQILLT 190 (351)
Q Consensus 141 ~~~~~~~l~~~Gv~l~~~~~~~~~~~G~~~~l~s~~~~a~~~v~~~~~~~ 190 (351)
...+|..+.++|+++.....+ |.+..+++-...|......|+.++
T Consensus 4 v~v~G~~lv~~Gii~~~lPGp-----G~l~i~~GL~iLa~ef~wArr~l~ 48 (53)
T PF09656_consen 4 VGVLGWVLVVAGIIMLPLPGP-----GLLVIFLGLAILATEFPWARRLLR 48 (53)
T ss_pred hhhHHHHHHHHHHHhhcCCCC-----cHHHHHHHHHHHHHhhHHHHHHHH
Confidence 356788899999998877654 666777777777777777777655
No 128
>PF06379 RhaT: L-rhamnose-proton symport protein (RhaT); InterPro: IPR004673 These proteins are members of the L-Rhamnose Symporter (RhaT) family. This family includes two characterised members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.; GO: 0015153 rhamnose transmembrane transporter activity, 0008645 hexose transport, 0016021 integral to membrane
Probab=42.02 E-value=2.9e+02 Score=25.60 Aligned_cols=165 Identities=19% Similarity=0.175 Sum_probs=94.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhcccccccccHHHHHHHHHHHHHHHHHHHHHHhcccC----CCCCChhhHhHHHH
Q 018749 15 ILLSYTYVAIWIFLSFTVIVYNKYILDKKMYNWPFPISLTMIHMSFCATLAFLLIKVFKFVE----PVTMSRDLYFSSVV 90 (351)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~K~~l~~~~~~~~~p~~~~~~r~~~~~~~l~~~~~~~~~~~----~~~~~~~~~~~~~~ 90 (351)
.+..+++..+-.++++++..=-|.+=+ ..+. .+.+. +.+++.++.-.+........ -...|.+. .....
T Consensus 5 ii~Gii~h~iGg~~~~sfy~P~kkvk~---WsWE-s~Wlv--~gi~swli~P~~~a~l~ip~~~~i~~~~~~~~-l~~~~ 77 (344)
T PF06379_consen 5 IILGIIFHAIGGFASGSFYVPFKKVKG---WSWE-SYWLV--QGIFSWLIVPWLWALLAIPDFFSIYSATPAST-LFWTF 77 (344)
T ss_pred HHHHHHHHHHHHHHhhhhccchhhcCC---ccHH-HHHHH--HHHHHHHHHHHHHHHHhCCcHHHHHHhCChhH-HHHHH
Confidence 344455555666666666665565542 3344 33333 33344333222222222111 12233333 34466
Q ss_pred HHHHHHHHHHhhhhhhcccccHHHHHHHH-HHHHHHHHHHHHHhcc-------ccccchhhHHHHHHHhhhheeeec---
Q 018749 91 PIGALYSLSLWLSNSAYIYLSVSFIQMLK-ALMPVAVYSIGVTFKK-------ESFKSDTMCNMVSISVGVAIAAYG--- 159 (351)
Q Consensus 91 ~~~l~~~~~~~~~~~al~~~~~s~~~vi~-~~~pi~~~ll~~~~~~-------e~~~~~~~~~~~l~~~Gv~l~~~~--- 159 (351)
..+++.+.....+-.+++|+.+|..+-+. .+.-.+=.++-.++.+ ++-.....++++++++|+++....
T Consensus 78 l~G~lWGIGgltfGl~mryLGvSLG~sI~lGl~~~~GTlippi~~g~~~~l~~~~~g~~vL~Gv~v~LiGIai~g~AG~~ 157 (344)
T PF06379_consen 78 LFGVLWGIGGLTFGLAMRYLGVSLGQSIALGLCAVFGTLIPPIFQGTFDELLATPSGQIVLLGVAVCLIGIAICGKAGSM 157 (344)
T ss_pred HHHHHHhcchhhHhHHHHHHhHHHHHHHHHHHHHHHhhchHHHHcCcccccccCCCchhhhhHHHHHHHHHHHHhHHHHh
Confidence 77888888888888999999888776554 3333333333333332 233456789999999999986531
Q ss_pred -C-------cccc-hhHHHHHHHHHHHHHHHHHHHH
Q 018749 160 -E-------AKFD-SWGVVLQLGAVAFEATRLVMIQ 186 (351)
Q Consensus 160 -~-------~~~~-~~G~~~~l~s~~~~a~~~v~~~ 186 (351)
| .+++ -.|.+.++++.+..|..+.-.+
T Consensus 158 Ke~~~~~~~~efn~~kGl~iAv~sGv~Sa~fn~g~~ 193 (344)
T PF06379_consen 158 KEKELGEEAKEFNFKKGLIIAVLSGVMSACFNFGLD 193 (344)
T ss_pred hhhhhccchhhhhhhhhHHHHHHHHHHHHHHHHHHH
Confidence 1 1223 3699999999998888776544
No 129
>COG3169 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=38.48 E-value=1.6e+02 Score=21.70 Aligned_cols=30 Identities=17% Similarity=0.192 Sum_probs=25.6
Q ss_pred HHHHHHhccccccchhhHHHHHHHhhhhee
Q 018749 127 YSIGVTFKKESFKSDTMCNMVSISVGVAIA 156 (351)
Q Consensus 127 ~ll~~~~~~e~~~~~~~~~~~l~~~Gv~l~ 156 (351)
..++++.+||.+++..+.+..+..+|+.++
T Consensus 84 v~Fsvfyl~epl~~~~l~a~~~i~gav~fi 113 (116)
T COG3169 84 VPFSVFYLKEPLRWNYLWAFLLILGAVYFI 113 (116)
T ss_pred HHHHHHHHcCcchHHHHHHHHHHHHHHHHh
Confidence 357888999999999999999988888664
No 130
>TIGR02865 spore_II_E stage II sporulation protein E. Stage II sporulation protein E (SpoIIE) is a multiple membrane spanning protein with two separable functions. It plays a role in the switch to polar cell division during sporulation. By means of it protein phosphatase activity, located in the C-terminal region, it activates sigma-F. All proteins that score above the trusted cutoff to this model are found in endospore-forming Gram-positive bacteria. Surprisingly, a sequence from the Cyanobacterium-like (and presumably non-spore-forming) photosynthesizer Heliobacillus mobilis is homologous, and scores between the trusted and noise cutoffs.
Probab=36.83 E-value=5.1e+02 Score=27.05 Aligned_cols=44 Identities=5% Similarity=0.129 Sum_probs=29.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHhccccccchhhHHHHHHHhhhhee
Q 018749 113 SFIQMLKALMPVAVYSIGVTFKKESFKSDTMCNMVSISVGVAIA 156 (351)
Q Consensus 113 s~~~vi~~~~pi~~~ll~~~~~~e~~~~~~~~~~~l~~~Gv~l~ 156 (351)
+-+.++..+.|+-++.++.+...+|.+...+.+.+-.++|.+.+
T Consensus 11 gRa~il~~l~PFg~af~~a~~~~~~~~~~~~~~~~~~~~G~~t~ 54 (764)
T TIGR02865 11 GRAVIVSPMAPFGIAFLAAVLLAKKGGDKAFFSALGVLLGAISI 54 (764)
T ss_pred hHHHHhcCCCchHHHHHHHHHHhhcccchHHHHHHHHHHHHHHh
Confidence 34456777889888888887766665445566666666776543
No 131
>COG4858 Uncharacterized membrane-bound protein conserved in bacteria [Function unknown]
Probab=36.41 E-value=2.3e+02 Score=23.75 Aligned_cols=22 Identities=14% Similarity=0.159 Sum_probs=14.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHhh
Q 018749 19 YTYVAIWIFLSFTVIVYNKYIL 40 (351)
Q Consensus 19 ~~~~~~~~~~~~~~~~~~K~~l 40 (351)
+++.......|+...+++|-+.
T Consensus 102 Ll~lg~~aLlsgitaff~~nA~ 123 (226)
T COG4858 102 LLFLGAMALLSGITAFFQKNAQ 123 (226)
T ss_pred HHHHHHHHHHHHHHHHHhcCCc
Confidence 3445556666777777777766
No 132
>PRK06638 NADH:ubiquinone oxidoreductase subunit J; Provisional
Probab=36.31 E-value=2.6e+02 Score=23.54 Aligned_cols=23 Identities=22% Similarity=0.221 Sum_probs=14.8
Q ss_pred hhhHhhcCCccchhhHHHHHHHH
Q 018749 277 AFSWSVIKDTVTPINLFGYGLAF 299 (351)
Q Consensus 277 ~~~~~~~~e~~s~~~~~G~~li~ 299 (351)
.+|..++++-.=+..++|..+.+
T Consensus 134 ~iG~~L~t~y~l~fe~~silLLv 156 (198)
T PRK06638 134 AIGILLFTDYLLPFELASVLLLV 156 (198)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH
Confidence 34666676666677777776543
No 133
>KOG3762 consensus Predicted transporter [General function prediction only]
Probab=35.62 E-value=50 Score=32.61 Aligned_cols=13 Identities=23% Similarity=0.416 Sum_probs=6.4
Q ss_pred chhhHHHHHHHHH
Q 018749 288 TPINLFGYGLAFL 300 (351)
Q Consensus 288 s~~~~~G~~li~~ 300 (351)
+..++.|+++.+.
T Consensus 527 ttf~~~giAcl~~ 539 (618)
T KOG3762|consen 527 TTFRIFGIACLVT 539 (618)
T ss_pred HHHHHHHHHHHHH
Confidence 3345566554443
No 134
>PF08627 CRT-like: CRT-like; InterPro: IPR013936 This region is found in proteins related to Plasmodium falciparum chloroquine resistance transporter (CRT).
Probab=33.55 E-value=1.2e+02 Score=23.56 Aligned_cols=42 Identities=17% Similarity=0.276 Sum_probs=31.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccccc-cHHHHHHHHH
Q 018749 13 KKILLSYTYVAIWIFLSFTVIVYNKYILDKKMYNWP-FPISLTMIHM 58 (351)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~K~~l~~~~~~~~-~p~~~~~~r~ 58 (351)
++.+.++++++++.++++...++-|.+.. .++ +|++++-+--
T Consensus 53 ke~~~L~v~~vv~V~s~v~N~VL~K~~~~----~m~NY~fFL~QlTt 95 (130)
T PF08627_consen 53 KENFKLLVYVVVYVVSGVINRVLYKKMTN----PMKNYPFFLNQLTT 95 (130)
T ss_pred hcchHHHHHHHHHHHHHHHHHHHHHHHHh----hcccchHHHHHhcc
Confidence 45778888899999999988888888873 443 5766655543
No 135
>KOG1582 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]
Probab=32.37 E-value=2e+02 Score=25.73 Aligned_cols=52 Identities=6% Similarity=0.163 Sum_probs=42.1
Q ss_pred cccHHHHHHHHHHHHHHHHHHHHHhccccccchhhHHHHHHHhhhheeeecC
Q 018749 109 YLSVSFIQMLKALMPVAVYSIGVTFKKESFKSDTMCNMVSISVGVAIAAYGE 160 (351)
Q Consensus 109 ~~~~s~~~vi~~~~pi~~~ll~~~~~~e~~~~~~~~~~~l~~~Gv~l~~~~~ 160 (351)
.-.+..+..+....--.+.+++++++.+.++....-+.++.+.|+.+=....
T Consensus 283 ~fGA~~aatvTTaRKavTi~lSfllFsKPfT~qy~~~gllv~lgI~Ln~ysk 334 (367)
T KOG1582|consen 283 LFGALIAATVTTARKAVTILLSFLLFSKPFTEQYVWSGLLVVLGIYLNMYSK 334 (367)
T ss_pred HhchhHHHHHHHhHhHHHHHHHHHHHcCchHHHHhhhhHHHHHHHHhhcccC
Confidence 3456666677777777889999999999999999999999999998855443
No 136
>PF00909 Ammonium_transp: Ammonium Transporter Family; InterPro: IPR024041 This ammonium transporter domain consists of a duplication of 2 structural repeats of five helices each plus one extra C-terminal helix. It has been described as a channel that spans the membrane 11 times [].; PDB: 3B9Z_A 3B9Y_A 3B9W_A 3BHS_A 2B2H_A 2B2J_A 2B2F_A 2B2I_A 2NPG_A 2NUU_E ....
Probab=29.83 E-value=4.9e+02 Score=24.65 Aligned_cols=25 Identities=8% Similarity=-0.148 Sum_probs=12.5
Q ss_pred chhHHHHHHHH-HHHHHHHHHHHHHH
Q 018749 164 DSWGVVLQLGA-VAFEATRLVMIQIL 188 (351)
Q Consensus 164 ~~~G~~~~l~s-~~~~a~~~v~~~~~ 188 (351)
.+...+.++++ .+++-.+..+.+|.
T Consensus 274 p~~A~~iG~iag~i~~~~~~~l~~~~ 299 (399)
T PF00909_consen 274 PWGALLIGAIAGLISYFGVSWLLKRL 299 (399)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhhhhHhhhhhhheeccccee
Confidence 34455666655 34444444455554
No 137
>PRK13108 prolipoprotein diacylglyceryl transferase; Reviewed
Probab=26.98 E-value=78 Score=30.65 Aligned_cols=23 Identities=9% Similarity=-0.077 Sum_probs=19.1
Q ss_pred cchhhHHHHHHHHHhHhhhhhhh
Q 018749 287 VTPINLFGYGLAFLGVAYYNHSK 309 (351)
Q Consensus 287 ~s~~~~~G~~li~~g~~l~~~~~ 309 (351)
++..|++.+.++++|++++.+.+
T Consensus 254 l~~~Q~lSl~~il~gl~~~~~~~ 276 (460)
T PRK13108 254 IRINSFTSTFVFIGAVVYIILAP 276 (460)
T ss_pred ccHHHHHHHHHHHHHHHHHHHhh
Confidence 78899999999999987765544
No 138
>PF13038 DUF3899: Domain of unknown function (DUF3899)
Probab=25.87 E-value=66 Score=23.20 Aligned_cols=19 Identities=21% Similarity=0.252 Sum_probs=13.8
Q ss_pred chhhHHHHHHHHHhHhhhh
Q 018749 288 TPINLFGYGLAFLGVAYYN 306 (351)
Q Consensus 288 s~~~~~G~~li~~g~~l~~ 306 (351)
+...++|.++.++|..++.
T Consensus 3 N~~Fl~~l~lliig~~~~v 21 (92)
T PF13038_consen 3 NILFLVGLILLIIGGFLFV 21 (92)
T ss_pred hHHHHHHHHHHHHHHHHHH
Confidence 4456788888888887754
No 139
>PF13937 DUF4212: Domain of unknown function (DUF4212)
Probab=25.46 E-value=2.5e+02 Score=19.92 Aligned_cols=46 Identities=22% Similarity=0.353 Sum_probs=29.0
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHH-HHHHHHhhcccccccccHHHHH
Q 018749 9 DGVIKKILLSYTYVAIWIFLSFTV-IVYNKYILDKKMYNWPFPISLT 54 (351)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~K~~l~~~~~~~~~p~~~~ 54 (351)
+-++.+...+....++|.+.+.+. .++...+-+-.-.++|..+.++
T Consensus 5 ~yWr~n~rl~~~lL~iW~vvsfg~~~lfa~~Ln~~~~~GfPlgfw~a 51 (81)
T PF13937_consen 5 AYWRKNLRLIAILLAIWFVVSFGVGILFADELNQITFGGFPLGFWFA 51 (81)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCeeCCCChHHHHH
Confidence 345566667777888999988887 6666655321124676555443
No 140
>PF15345 TMEM51: Transmembrane protein 51
Probab=25.03 E-value=76 Score=27.38 Aligned_cols=19 Identities=21% Similarity=0.263 Sum_probs=13.0
Q ss_pred HHHHHHHHhHhhhhhhhhh
Q 018749 293 FGYGLAFLGVAYYNHSKLQ 311 (351)
Q Consensus 293 ~G~~li~~g~~l~~~~~~~ 311 (351)
.|+++.++.+++--+.|++
T Consensus 67 ~Gv~LLLLSICL~IR~KRr 85 (233)
T PF15345_consen 67 SGVALLLLSICLSIRDKRR 85 (233)
T ss_pred HHHHHHHHHHHHHHHHHHH
Confidence 4777788888876655544
No 141
>PF08229 SHR3_chaperone: ER membrane protein SH3 ; InterPro: IPR013248 This family of proteins are membrane localised chaperones that are required for correct plasma membrane localisation of amino acid permeases (AAPs) []. Shr3 prevents AAPs proteins from aggregating and assists in their correct folding. In the absence of Shr3, AAPs are retained in the ER.
Probab=24.49 E-value=80 Score=26.64 Aligned_cols=14 Identities=21% Similarity=0.221 Sum_probs=6.0
Q ss_pred HHHHHHHhhhheee
Q 018749 144 CNMVSISVGVAIAA 157 (351)
Q Consensus 144 ~~~~l~~~Gv~l~~ 157 (351)
++-...+.|+....
T Consensus 13 i~stsF~LG~lf~~ 26 (196)
T PF08229_consen 13 ICSTSFLLGVLFSN 26 (196)
T ss_pred hHhhHHHHHHHHHc
Confidence 33334444554433
No 142
>KOG1443 consensus Predicted integral membrane protein [Function unknown]
Probab=24.32 E-value=5.6e+02 Score=23.49 Aligned_cols=53 Identities=8% Similarity=0.024 Sum_probs=40.2
Q ss_pred hhhcccccHHHHHHHHHHHHHHHHHHHHHhccccccchhhHHHHHHHhhhhee
Q 018749 104 NSAYIYLSVSFIQMLKALMPVAVYSIGVTFKKESFKSDTMCNMVSISVGVAIA 156 (351)
Q Consensus 104 ~~al~~~~~s~~~vi~~~~pi~~~ll~~~~~~e~~~~~~~~~~~l~~~Gv~l~ 156 (351)
+.-+.-+++-+.++..--.-+.+.+++.++.+++++..+|.|..++..|+..-
T Consensus 261 flLl~~Ts~ltlSIaGI~Kel~tl~la~ii~~d~ls~lN~~Gl~i~~agi~~~ 313 (349)
T KOG1443|consen 261 FLLLSRTSSLTLSIAGIVKEVCTLLLAIIILKDQLSLLNWLGLAICLAGILLH 313 (349)
T ss_pred HheeeeccceeeeHHHHHHHHHHHHHHHHHhhcchhhhHHHHHHHHHHHHHHh
Confidence 33344455444445555556778889999999999999999999999999876
No 143
>PF10754 DUF2569: Protein of unknown function (DUF2569); InterPro: IPR019690 This entry represents a protein that is conserved in bacteria. The function is not known, but several members are annotated as being YdgK or a homologue thereof and associated to the inner membrane. This signature also matches proteins that are described as transglutaminase-like enzymes, although this could not be confirmed.
Probab=23.74 E-value=3.8e+02 Score=21.33 Aligned_cols=25 Identities=12% Similarity=-0.039 Sum_probs=21.8
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHH
Q 018749 164 DSWGVVLQLGAVAFEATRLVMIQIL 188 (351)
Q Consensus 164 ~~~G~~~~l~s~~~~a~~~v~~~~~ 188 (351)
...+.+..+++++.|.-|...+||.
T Consensus 119 ~i~~l~~~li~a~IwipYf~~S~RV 143 (149)
T PF10754_consen 119 AIRELLRSLIAAAIWIPYFLRSKRV 143 (149)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhHHh
Confidence 3568889999999999999999987
No 144
>PF07857 DUF1632: CEO family (DUF1632); InterPro: IPR012435 These sequences are found in hypothetical eukaryotic proteins of unknown function. The region concerned is approximately 280 residues long.
Probab=22.99 E-value=5.3e+02 Score=22.78 Aligned_cols=101 Identities=8% Similarity=-0.020 Sum_probs=65.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhcccCCCCCChhhHhHHHHHHHHHHHHHHhhhhhhcccccHHHHHHHHHHHHHHHHH-
Q 018749 50 PISLTMIHMSFCATLAFLLIKVFKFVEPVTMSRDLYFSSVVPIGALYSLSLWLSNSAYIYLSVSFIQMLKALMPVAVYS- 128 (351)
Q Consensus 50 p~~~~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~al~~~~~s~~~vi~~~~pi~~~l- 128 (351)
++++.++......+..+++....+ .++ +....++.|.+.+.++.+....++.+..+....+=++.-+.+--
T Consensus 27 g~~fQw~~~~~i~~~g~~v~~~~~---~p~-----f~p~amlgG~lW~~gN~~~vpii~~iGLglg~liW~s~n~l~Gw~ 98 (254)
T PF07857_consen 27 GFFFQWVMCSGIFLVGLVVNLILG---FPP-----FYPWAMLGGALWATGNILVVPIIKTIGLGLGMLIWGSVNCLTGWA 98 (254)
T ss_pred cHHHHHHHHHHHHHHHHHHHHhcC---CCc-----ceeHHHhhhhhhhcCceeehhHhhhhhhHHHHHHHHHHHHHHHHH
Confidence 666666666555444444433221 122 12335667888999999999999999999999998875544433
Q ss_pred HHHH-hcc---cc--ccchhhHHHHHHHhhhheeee
Q 018749 129 IGVT-FKK---ES--FKSDTMCNMVSISVGVAIAAY 158 (351)
Q Consensus 129 l~~~-~~~---e~--~~~~~~~~~~l~~~Gv~l~~~ 158 (351)
.+.+ +++ |. -++.+++|++++++|..+..+
T Consensus 99 ~grfGlFg~~~~~~~~~~Ln~~G~~l~~~~~~~f~f 134 (254)
T PF07857_consen 99 SGRFGLFGLDPQVPSSPWLNYIGVALVLVSGIIFSF 134 (254)
T ss_pred HhhceeccccccccchhHHHHHHHHHHHHHHHheee
Confidence 3333 333 22 346679999999999887654
No 145
>PF09930 DUF2162: Predicted transporter (DUF2162); InterPro: IPR017199 This group represents a predicted membrane transporter, MTH672 type.
Probab=22.94 E-value=5e+02 Score=22.46 Aligned_cols=78 Identities=10% Similarity=0.007 Sum_probs=40.1
Q ss_pred CCCCChhhHhHHHHHHHHHHHHHHhhhhhhcccccHHHHHHHHHHHHHHHHH---HHHHhccccccchhhHHHHHHHhhh
Q 018749 77 PVTMSRDLYFSSVVPIGALYSLSLWLSNSAYIYLSVSFIQMLKALMPVAVYS---IGVTFKKESFKSDTMCNMVSISVGV 153 (351)
Q Consensus 77 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~al~~~~~s~~~vi~~~~pi~~~l---l~~~~~~e~~~~~~~~~~~l~~~Gv 153 (351)
.++.+++..+-..+|.-++++......-...+.++.+...+-.....+|... -+.++.+.+.+....++-...+.|.
T Consensus 93 ~~~~s~~t~lal~~PCPvCl~Ai~~S~~l~a~~~~~s~~~ig~~~g~if~i~il~ss~i~r~~~~~~p~~LG~~Mi~~Gl 172 (224)
T PF09930_consen 93 GKDSSRRTFLALSLPCPVCLTAIFFSIMLLAPSIGLSGWEIGLVLGLIFFILILLSSFIFRRLKKPYPIILGNFMIFLGL 172 (224)
T ss_pred CCCCcccchhhhhcCchHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHH
Confidence 3444555544555555566665555555555666666555555544443332 2233334444455556655555554
Q ss_pred h
Q 018749 154 A 154 (351)
Q Consensus 154 ~ 154 (351)
.
T Consensus 173 y 173 (224)
T PF09930_consen 173 Y 173 (224)
T ss_pred H
Confidence 3
No 146
>PF09586 YfhO: Bacterial membrane protein YfhO; InterPro: IPR018580 The yfhO gene is transcribed in Difco sporulation medium and the transcription is affected by the YvrGHb two-component system []. Some members of this family have been annotated as putative ABC transporter permease proteins.
Probab=22.60 E-value=9.1e+02 Score=25.33 Aligned_cols=77 Identities=18% Similarity=0.320 Sum_probs=42.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhcccCCCCCChhhHhHHHHHHHHHHHHHHhhhhhhcccccHHHHHHHHHHHHHHHHHHH
Q 018749 51 ISLTMIHMSFCATLAFLLIKVFKFVEPVTMSRDLYFSSVVPIGALYSLSLWLSNSAYIYLSVSFIQMLKALMPVAVYSIG 130 (351)
Q Consensus 51 ~~~~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~al~~~~~s~~~vi~~~~pi~~~ll~ 130 (351)
..+..+|+.++++.+..+++..+ ..+++ ...++++++|+++-.......+ ... .-....-|+....+.
T Consensus 93 ~~~~~lk~~lag~~~~~~l~~~~------~~~~~--~~~~i~s~~Yafsg~~~~~~~~---~~f-ld~~i~lPL~llgie 160 (843)
T PF09586_consen 93 LLLIILKIGLAGLFFYLYLRKFK------KSRSD--WAALIGSLLYAFSGYVIYYSFN---IMF-LDAMILLPLLLLGIE 160 (843)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhc------CCccc--HHHHHHHHHHHHHHHHHHHhhh---HHH-HHHHHHHHHHHHHHH
Confidence 44577888888777766654111 11111 3456677777765444443322 111 222345688888888
Q ss_pred HHhcccccc
Q 018749 131 VTFKKESFK 139 (351)
Q Consensus 131 ~~~~~e~~~ 139 (351)
.++.++|..
T Consensus 161 ~~~~~~k~~ 169 (843)
T PF09586_consen 161 RLLKEKKWW 169 (843)
T ss_pred HHHhcCCcc
Confidence 888777643
No 147
>COG4327 Predicted membrane protein [Function unknown]
Probab=21.67 E-value=1.6e+02 Score=21.37 Aligned_cols=43 Identities=21% Similarity=0.607 Sum_probs=29.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccccccHHHH
Q 018749 11 VIKKILLSYTYVAIWIFLSFTVIVYNKYILDKKMYNWPFPISL 53 (351)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~~~~K~~l~~~~~~~~~p~~~ 53 (351)
++.+...+....++|+..|....++.+.+-+=.-.++|+-+.+
T Consensus 14 wranttli~~lL~vwflVSfvvi~fa~alst~rifg~pf~ywm 56 (101)
T COG4327 14 WRANTTLIAALLGVWFLVSFVVILFARALSTMRIFGWPFGYWM 56 (101)
T ss_pred HHhhhHHHHHHHHHHHHHHHHHHHHHHhhcccEEeccchhhhh
Confidence 6667777888889999999888888777753223455544443
No 148
>COG5336 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=21.54 E-value=2e+02 Score=21.66 Aligned_cols=35 Identities=20% Similarity=0.205 Sum_probs=15.9
Q ss_pred hHHHhhhhHhhcCC-ccchhhHHHHHHHHHhHhhhh
Q 018749 272 DWLLIAFSWSVIKD-TVTPINLFGYGLAFLGVAYYN 306 (351)
Q Consensus 272 ~v~~~~~~~~~~~e-~~s~~~~~G~~li~~g~~l~~ 306 (351)
.++.+.+||++=+- .-+++.++...++-.|....+
T Consensus 56 ilVGa~iG~llD~~agTsPwglIv~lllGf~AG~ln 91 (116)
T COG5336 56 ILVGAGIGWLLDKFAGTSPWGLIVFLLLGFGAGVLN 91 (116)
T ss_pred HHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHH
Confidence 35556666654211 134455555444444433333
No 149
>PRK10263 DNA translocase FtsK; Provisional
Probab=21.40 E-value=1.2e+03 Score=26.23 Aligned_cols=22 Identities=9% Similarity=0.116 Sum_probs=10.3
Q ss_pred HHHHHHHHHHHHHHHHHhcchh
Q 018749 240 TNSLCAFALNLAVFLLVGKTSA 261 (351)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~ 261 (351)
.+|+++.+........+...+.
T Consensus 142 gGGIIG~lLs~lL~~LfG~vGa 163 (1355)
T PRK10263 142 SGGVIGSLLSTTLQPLLHSSGG 163 (1355)
T ss_pred ccchHHHHHHHHHHHHHhHHHH
Confidence 3555555554443344444443
No 150
>PRK10666 ammonium transporter; Provisional
Probab=21.13 E-value=7.5e+02 Score=23.80 Aligned_cols=52 Identities=8% Similarity=-0.099 Sum_probs=22.7
Q ss_pred ccccccchhhHHHHHHHhhhheeeec-CcccchhHHHHHHHHHHHHHHHHHHHHH
Q 018749 134 KKESFKSDTMCNMVSISVGVAIAAYG-EAKFDSWGVVLQLGAVAFEATRLVMIQI 187 (351)
Q Consensus 134 ~~e~~~~~~~~~~~l~~~Gv~l~~~~-~~~~~~~G~~~~l~s~~~~a~~~v~~~~ 187 (351)
.++|++......-+ ++|..-++.. +.-..+...+.++++++..-....+.|+
T Consensus 274 ~~gk~~~~~~~nG~--LaGLVaITa~a~~v~p~~A~iiG~vag~v~~~~~~~l~~ 326 (428)
T PRK10666 274 LRGKPSLLGACSGA--IAGLVGVTPACGYVGVGGALIIGVVAGLAGLWGVTMLKR 326 (428)
T ss_pred HhCCCCHHHHHHHH--hhhhhhcccccccCCHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 34455544433322 2444333322 2222344566666666655443333443
No 151
>PF09852 DUF2079: Predicted membrane protein (DUF2079); InterPro: IPR018650 This entry is represented by Sulfolobus virus STSV1, Orf64. The characteristics of the protein distribution suggest prophage matches in addition to the phage matches. This entry contains a family of various integral membrane proteins with no known function.
Probab=21.05 E-value=7.5e+02 Score=23.77 Aligned_cols=51 Identities=25% Similarity=0.304 Sum_probs=30.3
Q ss_pred cccHHHHHHHHHHHHHHHHHHHHHHhcccCCCCCChhhHhHHHHHHHHHHHHHHhhhh
Q 018749 47 WPFPISLTMIHMSFCATLAFLLIKVFKFVEPVTMSRDLYFSSVVPIGALYSLSLWLSN 104 (351)
Q Consensus 47 ~~~p~~~~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 104 (351)
+|.|.++...|.+.-++...++.+..++. ..+. +..+..++.|.++.....
T Consensus 56 ~Ps~~tLli~Qal~la~~~~pl~~lar~~---~~~~----~~a~~~~~~ylL~p~~~~ 106 (449)
T PF09852_consen 56 FPSPLTLLIVQALLLALGAIPLYRLARRR---LLSR----RLALLIALAYLLSPGLQG 106 (449)
T ss_pred hCCHHHHHHHHHHHHHHHHHHHHHHHHHH---cCCc----HHHHHHHHHHHHhHHHHh
Confidence 67799999999987777777766544332 1121 223444555655544443
No 152
>PF11118 DUF2627: Protein of unknown function (DUF2627); InterPro: IPR020138 This entry represents uncharacterised membrane proteins with no known function.
Probab=20.71 E-value=3.1e+02 Score=19.22 Aligned_cols=48 Identities=8% Similarity=0.085 Sum_probs=27.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccccccHHHHHHHHHHHHHHH
Q 018749 13 KKILLSYTYVAIWIFLSFTVIVYNKYILDKKMYNWPFPISLTMIHMSFCATL 64 (351)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~K~~l~~~~~~~~~p~~~~~~r~~~~~~~ 64 (351)
.+.+..++.++--....-+..++--.+++ .+..|....++|++.+.++
T Consensus 2 ~R~iAlliLvIPg~~a~yGiklMRD~~F~----~~~~p~~~lwlqfl~G~~l 49 (77)
T PF11118_consen 2 QRFIALLILVIPGILAAYGIKLMRDTVFG----ILFSPFPSLWLQFLAGLLL 49 (77)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHH----HhcCCchhHHHHHHHHHHH
Confidence 44555555555555555556555555553 3333666778898877654
No 153
>PRK09412 anaerobic C4-dicarboxylate transporter; Reviewed
Probab=20.19 E-value=7.8e+02 Score=23.64 Aligned_cols=12 Identities=8% Similarity=0.052 Sum_probs=5.7
Q ss_pred HHHHHHhccccc
Q 018749 127 YSIGVTFKKESF 138 (351)
Q Consensus 127 ~ll~~~~~~e~~ 138 (351)
.+++.++.+-|.
T Consensus 8 ~~~~~~~~g~~~ 19 (433)
T PRK09412 8 IVLLAIFLGARL 19 (433)
T ss_pred HHHHHHHHhHhh
Confidence 344455555443
No 154
>COG1971 Predicted membrane protein [Function unknown]
Probab=20.09 E-value=1.3e+02 Score=25.13 Aligned_cols=44 Identities=16% Similarity=0.099 Sum_probs=27.5
Q ss_pred hHHHHHHhhhhhHHHhhhhHhhcCCccchhhHHHHH-HHHHhHhh
Q 018749 261 ALTMNVAGVVKDWLLIAFSWSVIKDTVTPINLFGYG-LAFLGVAY 304 (351)
Q Consensus 261 ~~~~s~~~~l~~v~~~~~~~~~~~e~~s~~~~~G~~-li~~g~~l 304 (351)
+...+++..+.|......+.++-+-.-.+.+|+|.+ +.++|+.+
T Consensus 40 a~~fG~f~~i~pliG~~~g~~~s~~i~~~~~wigf~lL~~lG~~m 84 (190)
T COG1971 40 ALIFGVFQAIMPLIGWFIGKFLSTFIAEWAHWIGFVLLIILGLKM 84 (190)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 344555566667777777776654445677877665 55666654
Done!